Organism name Ensembl version Gene name Gene Ensembl ID Transcript Ensembl IDs Rank Number of transcripts covered Total number of transcript Amplicon lenght Chromosome Fwd primer start Fwd primer stop Fwd primer sequence # of SNPs in Fwd primer Fwd primer Tm Rev primer start Rev primer stop Rev primer sequence # of SNPs in Rev primer Rev primer Tm Ensembl status Warnings Drosophila melanogaster 61 snoRNA:Psi18S-1854c FBgn0083040 FBtr0113567 3 1 1 71 X 17039340 17039358 TGATCCCTACAGCGTTGTG 59 17039287 17039306 TGCCCTTAAGAGGAATAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2876 FBgn0086671 FBtr0091623 2 1 1 60 X 17038905 17038926 ATATCCGTAGCGTCATAATGTG 58 17038866 17038886 ATGTCTCTTCGTTTCATACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077358 3 1 2 85 X 21930346 21930365 CCCAATCTTATTTCGCACCA 58 21930413 21930591 TTAGTGCCATTCACCTGGT 59 NA Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 2 1 1 118 X 21847718 21847736 GGAATAGCCACAGTTACGG 58 21847818 21847901 TTGGTGTCCTTGAGAACCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG32857 FBgn0052857 FBtr0070052 1 1 1 103 X 21488280 21488298 GAGAGCTTGAAGTTCCTGC 58 21487144 21488213 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 unc FBgn0003950 FBtr0077259 3 1 1 85 X 20986759 20987075 CAAATATAACTAGAGTAACGCGGG 59 20986697 20986715 CTTTCTGGTAGGCCTTCCT 58 NA Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624 1 1 2 181 X 20902535 20902605 ATATGTGAAGGAGGAGCCG 59 20902372 20902392 CGTACTCATCTGGATACTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 3 1 1 83 X 20606741 20606822 AGATTAAACGGCGTACGGA 59 20606676 20606694 AAGCAGGATCAGTGTCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(1)G0004 FBgn0027334 FBtr0077298 1 1 1 70 X 20263145 20263163 AGCAAGATCCACATCCTGG 59 20263197 20263215 AGGATTAGGTTGCAGACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 2 2 2 61 X 20118146 20118164 CACTGCAACTACAACTGGG 58 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 skpE FBgn0031074 FBtr0074806 3 1 1 60 X 19717973 19717991 GATCTTTCCGACGGAAGTC 58 19717931 19717950 ATCCAACATGGTCTTGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 2 2 2 80 X 19533357 19533376 GAGTCCGCATATGAATCCTC 58 19533419 19533489 CACTGGTACACCTTCTCCT 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074713 3 1 8 160 X 19389564 19389582 GCAACTTCTAATTCGCTGC 57 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpS14 FBgn0044030 FBtr0074785 2 1 1 84 X 19373888 19373906 AATTCTCTGGCCAGGATCG 59 19373762 19373780 CATACTTTGTGCGCACCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 1 2 2 124 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092802 19093311 TAATGTTGTAGACGCGGCA 59 NA Drosophila melanogaster 61 CG34329 FBgn0085358 FBtr0112531 2 1 1 60 X 18944686 18944704 GATGGAAGAGTGCTCAAGG 57 18944726 18944746 AGCATCCAATGATATTGCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6900 FBgn0030958 FBtr0302363 3 1 1 123 X 18679919 18679937 AAGATGTCCACGGACAAGG 59 18680096 18680115 TAACTTGGAGGTTCAGTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 2 1 1 92 X 18553985 18554003 AGTTCCTAACGCAGTTCTG 57 18554059 18554145 AATCCGATTGCCTGAAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG6461 FBgn0030932 FBtr0074622 1 1 1 80 X 18400494 18400512 AGGCAATGTACGTTTGCTG 59 18400370 18400452 AGGTACTTCATGATCACAGCT 59 NA Drosophila melanogaster 61 Wnt5 FBgn0010194 FBtr0074623 2 1 1 60 X 18397979 18397998 TGGCTACTATCAGAACGAGG 58 18397938 18397960 GGTATCTGTTGGTTTAAGAAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32494 FBgn0052494 FBtr0074506 3 1 1 224 X 17894294 17894476 TGGGTATGGCAACATCAGG 59 17894663 17894682 TTTACTGCCTAGTCGTTCGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG32494 FBgn0052494 FBtr0074506 2 1 1 224 X 17894293 17894475 ATGGGTATGGCAACATCAG 57 17894663 17894681 TTACTGCCTAGTCGTTCGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG8211 FBgn0030858 FBtr0074480 2 1 1 83 X 17549867 17549885 CATGTGCGTGGATATGCTG 59 17549478 17549822 GTGAGGAAGGCTATCAGATCC 59 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 1 2 2 106 X 17521043 17521061 AAGAAGTCCCTGGTCATCG 59 17519674 17520973 AAGTGTTGTTTCTCCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8664 FBgn0030836 FBtr0074445 3 1 1 160 X 17176704 17176722 AAGTACTCAACGTCTGCCT 58 17176324 17176342 GAACTCATCCTCCATTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 1 4 4 80 X 16649790 16649879 TGAAAGTCAGCACTGTGGA 59 16649728 16649750 CATTGGTGTTCGAGATAAAGACC 59 NA Drosophila melanogaster 61 CG32568 FBgn0052568 FBtr0301043 1 1 1 81 X 16635876 16635943 GATGAAAGCAATAAGATAGCCG 57 16635983 16636003 CGTGGTTTCGATGTATAACCT 58 NA Drosophila melanogaster 61 CG9676 FBgn0030773 FBtr0074364 3 1 1 110 X 16593881 16593954 GCAACAATGTAGCTCCAGC 59 16593789 16593807 TGTAATTGGGATGCACGGT 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 3 9 9 80 X 16273082 16273102 CCATTTGGTTATGCATGAGCA 59 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 Gpi1 FBgn0086448 FBtr0074231 1 1 1 80 X 16254531 16254555 CCTTACTAGTGGACTTAATATCCGT 59 16254591 16254666 CCACATTGTAGAGGACTTTGG 58 NA Drosophila melanogaster 61 CG13957 FBgn0030739 FBtr0074224 3 1 1 80 X 16208636 16208656 CTCAATGGCCTTAGTACATCG 58 16208695 16208772 CAAATTGTCCAGTAGAATCCGA 58 NA Drosophila melanogaster 61 CG13957 FBgn0030739 FBtr0074224 1 1 1 80 X 16210367 16210454 GATAATTGACCAGGGCATAGAC 58 16210493 16210513 TTCATGTTGTAGGCATACGAG 58 NA Drosophila melanogaster 61 CG33173 FBgn0053173 FBtr0074093 3 1 1 80 X 15672608 15672626 AGGATCGTCGATACACTGC 59 15672669 15673438 CACCACAAATAGATGCGACG 59 NA Drosophila melanogaster 61 CG9514 FBgn0030592 FBtr0073980 3 1 1 118 X 14782503 14789805 ATTGGAAGTATCGCACCCA 59 14782403 14782424 GTAGAGCATCGTATTTAGCACC 59 NA Drosophila melanogaster 61 CG9522 FBgn0030587 FBtr0073986 2 1 1 152 X 14742525 14742689 ATTCTTCAGCGATGTTCCC 57 14742391 14742410 ACCTGATGCACTATGTTCTC 57 NA Drosophila melanogaster 61 CG18313 FBgn0030566 FBtr0073915 2 1 1 116 X 14274389 14274408 GTTGATTCACATCTCGGAGC 59 14274541 14274559 TGTCGCTTGTTGAAATCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL38 FBgn0030552 FBtr0073902 3 1 1 94 X 14121521 14121611 TGTCTTGAAGATCAAAGAGCC 58 14121667 14121685 AATTGAAGGGCTGCTTCAG 58 NA Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 2 2 2 95 X 14087772 14088051 GAATTGGACTGCGACTACC 58 14088110 14088128 GTTGCACATTAGTTCCGCT 58 NA Drosophila melanogaster 61 CG11071 FBgn0030532 FBtr0073829 1 1 1 67 X 13751050 13751068 CAGAATTCTCAGCCTGCTG 58 13750779 13751019 GTAGTCCACGTGTCCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12177 FBgn0030510 FBtr0073846 2 1 1 96 X 13573998 13574016 CATCACCACAATGGGATGC 59 13573326 13573939 TATGGGAATATCTGTGCGCT 59 NA Drosophila melanogaster 61 CG11164 FBgn0030507 FBtr0073809 3 1 1 96 X 13562473 13562563 TGCGCAAAGAGCAATATCG 59 13562623 13562641 GCATTTAAGGTTCCCTGGG 58 NA Drosophila melanogaster 61 CG32643 FBgn0052643 FBtr0073716 1 1 1 60 X 12878889 12878907 CACCACGAAAGTCCTTGAC 58 12878929 12878949 CTATTCCCGATTCAATGGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 2 6 6 84 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545582 TATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 CG2574 FBgn0030386 FBtr0073644 3 1 1 97 X 12303387 12303406 ATATACCACTGCAACGTGGA 59 12303465 12303553 GAAAGTAGAACCTTGGCCAC 58 NA Drosophila melanogaster 61 e(y)2 FBgn0000618 FBtr0073540 2 1 1 61 X 11470249 11470267 AGATACGCACCATTCTCAC 57 11470206 11470224 TTAGGATTCGTCCTCTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sisA FBgn0003411 FBtr0073461 2 1 1 66 X 11215992 11216010 CTGGTTCGGATGTCAAGGA 59 11215944 11215962 TTGTTGTAGCGGGATTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 X11Lbeta FBgn0052677 FBtr0071493 1 1 1 82 X 10602859 10602938 AACGGAGTGATCTGCAGTC 59 10602981 10603002 TTTATCTCGATGATGCGATGAC 58 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 1 2 2 110 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359182 10359201 GTAGTTCTTGTGATGCGGTG 59 NA Drosophila melanogaster 61 CG2974 FBgn0030178 FBtr0290234 3 1 1 168 X 9979511 9979529 GGAACTAATGCAGCAGACC 58 9979303 9979321 CAAGTAGTGATGTTCGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0320 FBgn0028327 FBtr0071372 1 1 1 167 X 9447523 9447543 GCATCTGATGTTCCTAATGCT 58 9446708 9446726 CTATCCTCGTCCGCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0300066 3 1 2 104 X 8365766 8366469 TCGCTATCAAATCGACTATGC 58 8366535 8366553 ACATTGATGGCCTTTCCAG 58 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0071242 3 1 2 86 X 8353359 8354806 CAGTTGTGATGGATGCATCC 59 8353292 8353310 GAACAGTTGCGATTGAGCA 59 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 3 3 3 115 X 8140670 8140688 TATCCGGATATTCCCGGTG 58 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 CG18262 FBgn0030012 FBtr0071158 1 1 1 60 X 8047461 8047481 GATTTGCTGGACATCGAACTC 59 8047500 8047521 GAGTTTCATTATGCTCCGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114 2 1 3 121 X 7984173 7986004 AATAGTTGCAAGCAGCTCC 58 7984070 7984088 GAGTTACATCCGCTATCCG 57 NA InUTR Drosophila melanogaster 61 CG2254 FBgn0029994 FBtr0071116 1 1 1 97 X 7973951 7975476 AAAGTGACGCAAAGTGCTG 59 7973872 7973890 TTGACGATCAGCATCACGA 59 NA Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 3 1 1 92 X 7966435 7966536 AAACTGGACTACTTTCTGGTC 57 7966363 7966381 CAAATCGGAGGTGTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300899 2 1 4 157 X 7787441 7787795 ATCGATGCTATAATCGGATCGA 59 7787305 7787323 AGTGCTCGCTTATCCAGTC 59 NA InUTR Drosophila melanogaster 61 CG32718 FBgn0052718 FBtr0300461 1 1 1 80 X 7673085 7673162 ACTTTCAAGCTAACAAGCCC 58 7673205 7673223 GATTAGCTTCATCGCTGGC 59 NA Drosophila melanogaster 61 CG8300 FBgn0029937 FBtr0071015 3 1 1 115 X 6999319 6999337 GCATGCTGTACTTTAGCGA 58 6999413 6999835 CATTTCGCTCTCGTTTAAATGG 58 NA Drosophila melanogaster 61 Nf-YC FBgn0029905 FBtr0070974 1 1 1 135 X 6713123 6713203 CTGACTAATGTGCCGATCG 58 6713006 6713024 GGGTTGGTATGATGACCTG 57 NA Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 1 2 2 80 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997043 5997061 ATTCCGCCGTAATTCAAGG 58 NA Drosophila melanogaster 61 mof FBgn0014340 FBtr0070829 3 1 1 60 X 5768536 5768556 GAGCAGATCACAATCAAGGAG 58 5768496 5768514 AGATAATGTCGTCGTGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 2 6 6 80 X 4847072 4847093 ATCAAGGTGCAGTTGATTATCG 59 4847134 4847209 CGATTCGCAGTTCCTTGAG 59 NA Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0302037 2 1 2 60 X 4698755 4698774 CAGATAATCGGACTGCAGAC 58 4697635 4698734 TTGTTGGAAATTGGATCCTGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070705 1 1 4 80 X 4582308 4585674 CCATTTACCGTTCCAGTTTACC 59 4585709 4585733 CTTACAACTTCACTGGAATCTAACC 59 NA InUTR Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 3 5 5 81 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016108 GTCTAGCTGTCGAGTAGTCG 59 NA Drosophila melanogaster 61 Tip60 FBgn0026080 FBtr0070668 2 1 1 60 X 4010568 4010640 ATGTGGACTTCAACAAGCG 58 4010526 4010544 TTTCGCGTGTACAGATCCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18508 FBgn0028746 FBtr0070543 3 1 1 118 X 3067009 3067087 CATTAAATAGCCCGAACAATGG 58 3066912 3066930 TTCTTCTCCCAGGGATTCC 58 NA InUTR Drosophila melanogaster 61 CG17959 FBgn0029647 FBtr0070557 3 1 1 60 X 2841463 2841484 AGAGATATCTCAAGAAGCTCCT 58 2841505 2841523 CCGCTATATCCAGCACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13760 FBgn0040375 FBtr0300707 2 1 1 80 X 2478420 2478505 CACGATGGCCACATTTGTC 59 2478358 2478376 AATGATGTCCTCGTCCGTG 59 NA Nonspecific Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300879 1 2 3 82 X 2273236 2273318 CGGCAGATCTTTCTAGTTAACG 59 2273175 2273193 AGGGTGTTGAGAACATCCG 59 NA Drosophila melanogaster 61 mRpL14 FBgn0040389 FBtr0070405 3 1 1 60 X 2238397 2238416 TTTGGGAAAGAAAGCGATGG 59 2238356 2238377 TTTGTTGTAGACATGGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4d14 FBgn0023541 FBtr0070426 3 1 1 82 X 2069157 2069175 GGATACGAGGACCCAAGAG 59 2068940 2069117 CATATCAAAGATAGTCTTGGGTGAC 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 CG14797 FBgn0029587 FBtr0273400 2 1 1 88 X 1577782 1577868 CTACATGCAGTGTGACCAG 58 1577919 1577938 GGACTTCTTTAACAGCAGCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14797 FBgn0029587 FBtr0273400 1 1 1 88 X 1577782 1577868 CTACATGCAGTGTGACCAG 58 1577919 1577938 GGACTTCTTTAACAGCAGCA 58 NA Nonspecific Drosophila melanogaster 61 CG14770 FBgn0029573 FBtr0070213 3 1 1 221 X 1263400 1263656 AGTTGGCTATTACCTGCCT 58 1263841 1263859 GGTAGTGGTGGAACTTGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070209 1 1 3 80 X 1237239 1237333 CAAATGCATGACATCATGCG 58 1237373 1237394 GTAGATGAAGTAGCGATACGTG 58 NA Drosophila melanogaster 61 CG13361 FBgn0029532 FBtr0070149 2 1 1 86 X 646258 646356 TAAATTCACGCTACAAGGGAC 58 646192 646214 CGTTCTCTATGTACTTGGATGTG 59 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 1 3 3 80 X 528198 528219 AGTTGCTAATCATACAAGCCTG 58 528071 528160 TGGTCACGTCTATCCTAAAGAG 59 NA Drosophila melanogaster 61 Su(Ste):CR42421 FBgn0259852 FBtr0300148 1 1 1 60 U 7245611 7245630 ACTTGGTTCAAAGTGTTCGG 59 7245570 7245590 GCTTTGCTACTCGAATGAGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 3 1 2 291 4 1051401 1052237 GATGTGGCTGAGTAGAGGAG 59 1051129 1051150 ATAGATCTCAAATAGCCCAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 NfI FBgn0042696 FBtr0089141 2 1 1 80 4 296250 296271 ACTTTAAGAGGCTGTATGATCG 58 294528 296210 AGGGTGAAATTCATCCTGTC 57 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 2 3 3 108 4 231104 231195 TAGGAACAGCTGGTACTTTGG 59 231262 231283 TGCTATCGAGTTACTATCACGG 59 NA Drosophila melanogaster 61 CG33978 FBgn0053978 FBtr0100021 2 1 1 84 4 185016 185102 GTCACTTTCTCAAAGACTCCA 58 184952 184971 ACTGTCCTCGATCAATTGTG 58 NA Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084057 3 1 3 137 3R 17122803 17123535 TTGAAATAGGAAGCCAGTTGG 58 17123634 17123652 TCGAATAACGCTGCAATCG 59 NA Drosophila melanogaster 61 mRpL32 FBgn0039835 FBtr0085759 1 1 1 80 3R 27079013 27079088 TCTTTGTCCCTTCTGCTACC 59 27079131 27079149 TCTAGACCGAGTGTCTCCT 58 NA Drosophila melanogaster 61 CG33920 FBgn0053920 FBtr0091924 1 1 1 81 3R 26870379 26870397 AACCCGATAGCCAGTTACC 59 26870259 26870334 CGAGATCGTGATCGTAGGG 59 NA Drosophila melanogaster 61 CG34433 FBgn0085462 FBtr0112734 2 1 1 60 3R 26476153 26476171 ACCCGATCTTCCACTACCT 59 26476194 26476213 TAGAGTATTCCGCAGGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31013 FBgn0051013 FBtr0085671 1 1 1 80 3R 26470214 26470234 AATTACTAGGCGCATCATGGA 59 26470096 26470176 CCTATGCCGTAATTAATCACCTG 59 NA Drosophila melanogaster 61 Rpt6R FBgn0039788 FBtr0085680 1 1 1 113 3R 26409039 26409113 GAACTCAACCTCAAGGTTCG 58 26408945 26408968 CTTCACAAGGACCTTATTCTTGTC 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 1 3 4 87 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746 3 1 2 189 3R 25999043 25999124 TCATGGATATCGCCAACGA 59 25998872 25998891 AATTTGTCACCGTCGATGAG 58 NA Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 3 2 2 80 3R 25736007 25736169 TACGTCAACCTCAAATTCAGC 59 25736211 25736229 TCGACCATTCACCAGAACC 59 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888,FBtr0301073 2 2 2 81 3R 25697034 25697054 GCATACAGAGCATGACATCAC 59 25697093 25697183 CGATCTATGCTTATAGCAGATGG 58 NA Drosophila melanogaster 61 CG7789 FBgn0039698 FBtr0085483 1 1 1 102 3R 25629390 25629473 GAGTATACACAGGGACACGT 59 25629538 25629556 GCTGTTGGTAGAATGGCTG 58 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 3 4 4 166 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617666 ATTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG14519 FBgn0039619 FBtr0085340 3 1 1 125 3R 24817030 24817048 TTAATTGGTACAGTGCGCC 58 24817135 24817155 CTGTTGCAGATATAGCTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322,FBtr0113301 3 6 6 80 3R 24639524 24639610 TGTTGACAATGAGTCTGATGC 59 24639648 24639670 TATCCGTAGCAGTAAGGATAGTG 59 NA Drosophila melanogaster 61 htt FBgn0027655 FBtr0085310 2 1 1 80 3R 24551396 24551415 AATGGATTAAGGAACGCTGC 59 24551455 24551685 AGTAGATTATGTGCTGATGCGA 59 NA Drosophila melanogaster 61 Mst98Ca FBgn0002865 FBtr0085277 3 1 1 74 3R 24117411 24117431 ATGCAGACAGATTACCATTCC 58 24117467 24117485 GACACCCAAATCAGCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564,FBtr0300606,FBtr0300607 2 3 3 84 3R 23973960 24027894 CAACTCCAAGCCAGAACAG 58 24027941 24027960 GGTGAATGCATCTTTCAGCT 59 NA Drosophila melanogaster 61 CG3330 FBgn0039511 FBtr0085170 3 1 1 60 3R 23155864 23155883 CCAAATCACTCAAGTCCTCC 58 23155823 23155841 TTGAGGGATGACTTCTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 3 2 2 86 3R 23068900 23068982 TTCTATAAGACCGAGTACGGG 58 23068834 23068852 CATGAAGTTGTCCACGCTG 59 NA Drosophila melanogaster 61 CG31063 FBgn0051063 FBtr0085127 2 1 1 114 3R 23053651 23053797 GTCTACAGATCTGGAGTTGGT 59 23053557 23053575 CCTCGATGATCTCGTCGTC 59 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 3 2 2 112 3R 21694500 21695268 GAGGGATCAGGTTGATCGT 58 21695344 21695362 GCGATCGAGTTACCAAGTC 58 NA Drosophila melanogaster 61 CG5886 FBgn0039379 FBtr0084907 1 1 1 180 3R 21677518 21677653 GAGGAGTTGGTCATGAAATCC 58 21677795 21677813 TAAGATCCCGCTGAACCTG 59 NA Drosophila melanogaster 61 CG31288 FBgn0051288 FBtr0084860 3 1 1 94 3R 21124915 21125030 CTGGAAATGAAAGATGGTAGTGTC 59 21124844 21124862 CCAAACTCGTTGATGTCGC 59 NA Drosophila melanogaster 61 CG11875 FBgn0039301 FBtr0084812 1 1 1 101 3R 21074246 21074264 ATGTCCGTCAAGAGTCACC 59 21074386 21074404 GATGACTGTCTGCTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13643 FBgn0040601 FBtr0084722 2 1 1 93 3R 20725649 20725667 ACTACATCGACCACAACCA 58 20725513 20725594 CTAAATCTTGCTTCGAGTCGT 58 NA Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 1 1 1 181 3R 20219090 20219169 ACATGGGTTTCAATGGTCG 58 20219308 20219332 GTAGATTCGATCATACTGATGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0084587 2 1 2 80 3R 19890037 19932554 AATATCCGGAGGATAGCTTATCAG 59 19889980 19890000 GTAACGTATCACGGATACGTG 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 1 4 4 99 3R 19870978 19871168 GAAATCAAGGTCAACTGGGC 59 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 1 1 1 83 3R 19362086 19362158 GAAATGCTTGAGTCTGACCA 58 19362022 19362040 ATTAAAGAGCGCCTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10170 FBgn0039085 FBtr0084420 2 1 1 98 3R 19360253 19360271 GTCACGTTGATCACACCAG 58 19360114 19360191 CTCGATCATTTCCTGGACG 58 NA Drosophila melanogaster 61 DNApol-epsilon FBgn0020756 FBtr0084408 3 1 1 80 3R 19174158 19174238 TCAACATGCATTCGAACGA 58 19174279 19174300 CATCCATTTGGATGAAGAACAG 57 NA Drosophila melanogaster 61 CG13840 FBgn0039028 FBtr0301686 3 1 1 60 3R 18641632 18641650 GCAGCAAACACCATTACCA 59 18641590 18641610 GTATATCCTGTTAATCCCGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5278 FBgn0038986 FBtr0084281 2 1 1 97 3R 18385399 18385420 TCATGTACTCCTACTACTTCCT 57 18384982 18385341 GAACTGGATCATCTGCAGG 58 NA Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 1 2 2 103 3R 18313105 18313241 GTTCGAGCAGGAGATTACCA 59 18313307 18313325 TGGGTTGAAAGGTTCCCAG 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 2 5 5 60 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18184313 18184331 GTCGAATGTAGTGAAGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ir94b FBgn0051424 FBtr0084249 3 1 1 60 3R 17941337 17941355 CAGAGAACGTGTACATCCG 58 17941295 17941315 GATAAGTATGCACCACAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 2 1 1 178 3R 17357663 17357760 ATGAAGGTGTGGAAACGAC 58 17357356 17357378 GCCAGACAATTATGGATTAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 lbl FBgn0008651 FBtr0084092 1 1 2 180 3R 17236943 17236961 GAACATATTTGCCACGCGT 59 17236493 17236800 GAACCAAGTGATGACCTGTG 58 NA Drosophila melanogaster 61 Rab1 FBgn0016700 FBtr0084104 1 1 1 81 3R 17093453 17094506 GTGAATCCGGAATACGATTATCTC 59 17093395 17093413 ATCGCAACAGAAGACAGGA 59 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 3 2 2 61 3R 16564041 16564325 TGGCTCCAGAAACTATCCC 58 16563998 16564016 TTCTGTATCCACCACGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 1 2 2 106 3R 16417315 16417398 AAAGCTTTCTGGATCCTTCG 58 16417228 16417248 ACCCTTAACCTTAAGTGTGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34118 FBgn0083954 FBtr0110821 2 1 1 83 3R 16309753 16309772 CCAACATAGCAGAACTCGAC 58 16307343 16309707 CACAGTTCACATGGCTAGC 58 NA InUTR Drosophila melanogaster 61 CG11453 FBgn0038734 FBtr0083791 2 1 1 83 3R 15609857 15609875 CTCAAGGATCATCGACTGG 57 15609920 15610000 AGTTTCGGGTACATAGTACAG 57 NA Drosophila melanogaster 61 CG14280 FBgn0038695 FBtr0083738 3 1 1 81 3R 15084771 15084791 CAATTTATAGTCTCCGGCCAC 58 15084832 15084908 GGATATAAATATGCTGGCCCG 58 NA Drosophila melanogaster 61 cry FBgn0025680 FBtr0083736 1 1 1 80 3R 15040617 15040871 GGAATTTGTTCACGAGCCC 59 15040915 15040933 TCCGGATAATGGACTCCGA 59 NA Drosophila melanogaster 61 nos FBgn0002962 FBtr0083732 3 1 1 82 3R 14984694 14984785 GCAAGGCCAAAGAGATCAG 58 14984828 14984849 CACTGAGTGGCTATTGATAACC 59 NA Drosophila melanogaster 61 Cyp12a4 FBgn0038681 FBtr0083731 2 1 1 81 3R 14962090 14962110 GAAACTGCTGAAGGTAGACAG 58 14962152 14962232 GCTCGATGTCGTATCAACTC 58 NA Drosophila melanogaster 61 CG14291 FBgn0038660 FBtr0083724 2 1 1 60 3R 14737817 14737836 GCTCAGTACATGACCATCTC 57 14737776 14737796 CTAGCTCCTTCAGCATTAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083612 1 1 3 280 3R 14025010 14025028 CGAATACACGGACAAAGCG 59 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7218 FBgn0038569 FBtr0083623 2 1 1 80 3R 13988747 13988840 CTGATCATGTTTCAGGCCAC 59 13988686 13988707 ATTCGATATCATGATGGTCAGC 58 NA Drosophila melanogaster 61 CG14323 FBgn0038529 FBtr0083498 2 1 1 60 3R 13447572 13447593 ACAATTGTCCTGTATATGGCTG 58 13447533 13447551 GCGTAGTAACCTGGTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prx5037 FBgn0038519 FBtr0083503 1 1 1 80 3R 13371567 13371643 CCCACTAGATTTCACATTCGT 58 13371507 13371528 GTGTTAATGTCATGGAACTCCT 58 NA Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 1 2 2 165 3R 12959027 12959046 GCAGAACCAAGATGATGTGG 59 12959173 12959257 ATACACATCCGGATAGCCAC 59 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 1 3 3 81 3R 12894607 12894696 CCTTTGAAACCAATAGGGCTG 59 12894739 12894757 ATGCTGAAGTAGTCGACGG 59 NA Drosophila melanogaster 61 CG18213 FBgn0038470 FBtr0083429 1 1 1 83 3R 12865223 12865308 TAACCAGAATACGACCGCA 58 12865158 12865176 ATTATCGTTCCCTCCGCTG 59 NA Drosophila melanogaster 61 CG14905 FBgn0038452 FBtr0083357 2 1 1 80 3R 12449045 12449137 CAAGATGAAATAGAGCGCCA 58 12448984 12449005 ATTTAGATAGTCAAGTGCCTCG 58 NA Drosophila melanogaster 61 CG14892 FBgn0038447 FBtr0083327 2 1 1 140 3R 12421705 12421787 GTTCACAACGATCTCTTTAACC 57 12421888 12421906 GAAGTTGTGGTAGCGATGG 58 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 3 2 2 129 3R 12209798 12209821 CATAAGGATAAGGAGGATAACGGA 59 12205508 12209710 ATCCATTTAGGGCCTGGAG 58 NA Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083326 1 1 2 82 3R 12172994 12173105 ATCTTCGACGAGTCCTCCT 59 12172930 12172949 GAATCCCTACCCTGGTACAC 59 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480,FBtr0301479 3 2 2 80 3R 11878492 11878510 TAACGCTAAAGGAGCTGGA 58 11878552 11878627 GCTGGGACTTTAGATATCTGG 57 NA Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 1 1 1 60 3R 11659783 11659801 ATGATTCGGATGACGATGG 57 11659640 11659759 TATATTGCGGGCTTTGGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4576 FBgn0038366 FBtr0083180 2 1 1 89 3R 11654104 11654250 AAGTGGAAGATGATGCGTG 58 11654303 11654321 GCAGATCCACTAAGCTACC 57 NA Drosophila melanogaster 61 CG9589 FBgn0038361 FBtr0083173 2 1 1 60 3R 11614890 11614908 ACGATTGTGTTCTTCGGAC 58 11614931 11614950 TGTAGTTCCCAAAGAACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 h-cup FBgn0038334 FBtr0083107 2 1 1 60 3R 11207885 11207903 GCTCATCCAACAATTCGCT 58 11207843 11207862 AGAGCCTCCTCAATAAAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ear FBgn0026441 FBtr0083082 2 1 1 138 3R 11147313 11147402 GAAACCCAAACGAGTGGTC 59 11147504 11147522 CAGTACCAGGTCGTACTGG 59 NA Drosophila melanogaster 61 CG6499 FBgn0038309 FBtr0113238 2 1 1 91 3R 11073838 11073911 ACCAGCTCCATCTATTCCT 57 11073765 11073783 GTAATGGACACTAGGGAGC 57 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 2 2 4 63 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055560 11055578 GTGTTTACCGTGGACAGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 3 2 2 80 3R 11040076 11040154 CAACGATACTGATCAGGCG 58 11040198 11040216 TCGACGAAGAAGTACCGTC 59 NA Drosophila melanogaster 61 CG6934 FBgn0038289 FBtr0083039 2 1 1 71 3R 10937904 10957340 TGTTGTGAGAGCGAATGTG 58 10937851 10937873 TAGCGGATAGACATCACTATTCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14857 FBgn0038262 FBtr0082993 3 1 1 80 3R 10629457 10629547 GAACAATAGACAACTGCCCA 58 10629587 10629608 CAACAATCAAAGGATAGCATGG 58 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630,FBtr0112631 2 3 3 80 3R 10221737 10225449 TGTACGAAGATCATCAGTTCC 57 10221677 10221695 ACTGCAACTGATCGTTCTC 57 NA Drosophila melanogaster 61 CG8538 FBgn0038223 FBtr0273391 1 1 1 81 3R 10150412 10150491 TTCAAGGAATATACTCTTCGGC 58 10150352 10150370 CTTCAGCGGATCAAAGCTC 59 NA Drosophila melanogaster 61 Art6 FBgn0038189 FBtr0082878 1 1 1 114 3R 9771190 9771210 AATCAGAAGGAGAATGTGGTG 58 9771038 9771114 ACAGAGCATTTCCCATCCA 59 NA Drosophila melanogaster 61 CG9759 FBgn0038160 FBtr0082861 1 1 1 70 3R 9434792 9434810 TCTGGCGGATGTAAATCAG 57 9434740 9434758 ATCCAAATTGTCTGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8483 FBgn0038126 FBtr0082782 3 1 1 123 3R 9036041 9036629 CCGTACAATAAATCGCTTTACG 58 9035939 9035958 CTTCTGCACCTCGTTAAACC 59 NA Drosophila melanogaster 61 CG31157 FBgn0051157 FBtr0113394 3 1 1 80 3R 8873579 8873599 CCTTCCTGTGGAATCTCTACC 59 8873639 8873737 ATCAAAGGTAACAGACCAGCA 59 NA Drosophila melanogaster 61 l(3)87Df FBgn0002354 FBtr0082703 2 1 1 80 3R 8856983 8857066 GACCTGCAGGTATCAATGG 58 8857110 8857128 TCATAAAGGGCTTGTCGTC 57 NA Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 3 1 1 110 3R 8822346 8822423 AATGTTGTCTACACATCCGTG 58 8822495 8822513 TGATGTAACTCGCTCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 yellow-f2 FBgn0038105 FBtr0082722 1 1 1 80 3R 8820200 8820218 TCTACAGAACCTCCGTGGA 59 8820030 8820159 GTTGGCGGTTATTTGGATACTC 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 2 2 6 82 3R 8522009 8522792 CATAGTCATGCAGGTGGCT 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082453,FBtr0082454 1 2 6 105 3R 7418335 7419051 TTTCATTGGTGATGCACCAC 59 7418249 7418267 CTTCATGTGGTTCTTGCCG 59 NA Drosophila melanogaster 61 Ugt86De FBgn0040255 FBtr0082376 1 1 1 60 3R 6993443 6993464 TCCAGTTCCGGAATTATTTGAC 58 6993338 6993358 CTTCCGGTTTGTTAGATTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14687 FBgn0037835 FBtr0082280 2 1 1 66 3R 6618816 6618834 CCATTAAGATTCAGGCCGG 58 6618864 6618882 TTCTTGCTGGATCGATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14688 FBgn0037819 FBtr0113215 1 1 1 85 3R 6504120 6504138 CTGATGGTCTACGATCGGG 59 6503778 6504071 ATTAGAATGCAGGTGCCCT 59 NA Drosophila melanogaster 61 Invadolysin FBgn0086359 FBtr0082181 3 1 1 91 3R 5981456 5981556 TTGATAAATGACACCGTTCTCC 58 5981607 5981626 CTATTGAGTCGGATAACGCC 58 NA Drosophila melanogaster 61 CG6208 FBgn0037789 FBtr0082195 2 1 1 60 3R 5947032 5947051 ATAGGACAGACGGATAGTGC 58 5946991 5947012 CTGCCTTGAAATACATACCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtTFB2 FBgn0037778 FBtr0082173 3 1 1 101 3R 5871968 5871986 GCACTTGATCAACTCCCTC 58 5872047 5872130 CAGGTGAGATGTATGTATATGGG 58 NA Drosophila melanogaster 61 mtTFB2 FBgn0037778 FBtr0082173 2 1 1 100 3R 5871967 5871985 AGCACTTGATCAACTCCCT 58 5872045 5872128 GGTGAGATGTATGTATATGGGTG 58 NA Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213 1 1 2 89 3R 5608122 5608140 ATGGGCGTAGGAGATACTG 58 5608190 5608270 ACTCTGTAAGATAGTCGAAGGA 58 NA Drosophila melanogaster 61 CG18542 FBgn0037731 FBtr0082084 2 1 1 60 3R 5511649 5511669 ATGTCGTTCTCGAATAAGTCC 58 5511691 5511771 TGAACTGCAGGGTGATCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11033 FBgn0037659 FBtr0300691 1 1 1 80 3R 4886240 4886328 CTATGACTATAAGCCTCGCC 57 4886371 4886389 CCTTGACCATGGGAAACAG 58 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996,FBtr0081997 2 2 2 135 3R 4868681 4868699 GAAAGCCGGGTTTGATCAC 59 4868497 4868583 TGGCGAACTTCTTCAAAGTC 58 NA Drosophila melanogaster 61 CG11964 FBgn0037644 FBtr0082015 1 1 1 80 3R 4768859 4768940 CAGCATAATGAGGGAATACGC 59 4768799 4768821 GATAATATGTGGTTCTGCTCCTG 59 NA Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0302489,FBtr0081943 3 2 2 159 3R 4580267 4580285 CTACTCCAATCGATCGGGA 58 4580050 4580068 AATGGGCAGATCAATGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 2 2 2 97 3R 4478507 4478525 ATATCCGGCGATAGTCGTC 58 4478374 4478392 CTGTAACGATTCCCAGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 3 2 2 95 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365143 3365161 GTATGTGGAAGCACTGGAG 57 NA Drosophila melanogaster 61 CG42656 FBgn0261508 FBtr0302437 1 1 1 70 3R 3318944 3318963 TCGAAATGGATGCACTTCTG 58 3318837 3318855 CAAGTGCAGGCTTATTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir84a FBgn0037501 FBtr0081531 1 1 1 157 3R 3233598 3233940 TTCAATCTCAGCTTGGCCA 59 3234061 3234079 TACTGAACGTAGGGCTGTC 58 NA Drosophila melanogaster 61 CG2656 FBgn0037478 FBtr0081568 1 1 1 80 3R 2971291 2976781 TTGAGGATTTCAGTTTGGTGAG 59 2976820 2976840 CAATTTGTAGCAGAAGATCGC 58 NA Drosophila melanogaster 61 CG10098 FBgn0037472 FBtr0081563 3 1 1 110 3R 2950777 2951151 ATAGTGCGCTTGACTTTGG 58 2951222 2951243 AGCGATGAAGTTTAGTTTGGAG 59 NA Drosophila melanogaster 61 Spase18-21 FBgn0026567 FBtr0081687 1 1 1 60 3R 2484853 2484871 CTTACGTGGGCATCATCAC 58 2484895 2484974 AGAATGGCCCACTTAACCT 58 NA DesignRelaxed Drosophila melanogaster 61 Osi12 FBgn0037419 FBtr0078602 1 1 1 132 3R 2104893 2107121 ACTAGAGGAAGGTCGTGGT 59 2107216 2107235 GATAATCAGTGCCTTGCCTG 59 NA Drosophila melanogaster 61 Osi9 FBgn0037416 FBtr0078599 3 1 1 95 3R 2086255 2086335 GTCTTGTGCATGAAGGAGC 59 2086394 2086412 CTCATCGGTCTTGACCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31562 FBgn0051562 FBtr0078589 2 1 1 83 3R 2010550 2010568 ATGATCCTCGAGGATCTGG 58 2010749 2010767 CGGCTTGGTCTTAACAACC 59 NA DesignNoJunction Drosophila melanogaster 61 ECSIT FBgn0028436 FBtr0078647 1 1 1 60 3R 1683261 1683280 TGTCTGAATTAGATGAGCGG 57 1683303 1683321 AAGGGTACTTCGATGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 1 3 3 80 3R 1468681 1468759 GGGACATCACACTGTTTCAC 59 1468620 1468638 GAACTAGCGACGACATGGA 59 NA Drosophila melanogaster 61 Tim17a2 FBgn0037307 FBtr0078820 3 1 1 60 3R 1084256 1084274 AGTGGAGGGTAAGGAACTG 58 1084214 1084232 TACCAGATCGACCAACGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14659 FBgn0037284 FBtr0078873 2 1 1 60 3R 656851 656869 AATGGCACTGCTTCTATCC 57 656809 656828 GTGTATATCACGCTCCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 1 2 2 85 3R 640425 640445 ACAGGAGTTGTATGCAATGGA 59 640492 641023 GATACAGACACATGCCGGT 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078940,FBtr0078939 2 2 4 272 3R 278929 278947 CTGCCGAGTACTACCACTG 59 273438 273457 TGTATCTGCTTATGCTGTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 3 2 2 89 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216888 216907 CATTGGCCGTACAATAATGC 58 NA Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078956,FBtr0078955 3 2 2 107 3R 155847 155866 CAAGAAAGACGAGGACAAGG 58 155694 155715 GCATCTATTGTACTACGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0111222,FBtr0078978 1 2 2 60 3R 93724 93744 ACAGTGGGATATACGATCAGG 58 93766 93784 CGCTTGTTGTCAAGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31516 FBgn0051516 FBtr0078987 1 1 1 60 3R 44883 44903 CAACATGCAGATATGTCTGTC 57 44843 44861 GTACTCGAAGAACTGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dsk FBgn0000500 FBtr0078989 1 1 1 60 3R 15638 15659 TCTCCTCATGGATAATGATGAC 57 15599 15618 ATGGCCGTAATCATCAAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3327b FBgn0082966 FBtr0113612 3 1 1 80 3L 13036083 13036104 GTCTATTGGTTCAAATCGAAGC 58 13036145 13036163 GTTACTCAGACGACTGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:U49:66Da FBgn0060292 FBtr0076634 3 1 1 61 3L 8594590 8594610 TGTCTTCTTGATAGGAAGTGC 57 8594630 8594651 GCTTTCAGAGGGTTAAACTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:U49:66Da FBgn0060292 FBtr0076634 2 1 1 60 3L 8594590 8594610 TGTCTTCTTGATAGGAAGTGC 57 8594629 8594650 CTTTCAGAGGGTTAAACTAGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1086 FBgn0083058 FBtr0113602 3 1 1 68 3L 833163 833181 AATGTCTGTGCTTTGGTCG 58 833113 833132 AACGATGCTAGTAAGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 3 1 1 99 3L 23119496 23119830 TATGGCACTCCTTCTGGAC 58 23119891 23119911 GTTGTGAGATAAGCATTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 l(3)04053 FBgn0010830 FBtr0078535 1 1 1 93 3L 22732552 22732763 AACTAGAGGCGGAACTTCG 59 22732477 22732495 CTGTCTCTACCAGGTGTCG 59 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 1 2 2 80 3L 22062291 22062490 ATTGCTTTGTGTTAGGCGAC 59 22062230 22062250 GTTGATCCAGGATTCCATTGC 59 NA Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078384 2 1 2 267 3L 21526276 21526749 AACGACAAAGTCATCAGGTC 58 21526028 21526046 TTGTACTAGGCTTCGGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Neu2 FBgn0037085 FBtr0078394 1 1 1 60 3L 21482355 21482374 AACATGAACTTTGGATGCAC 57 21482314 21482333 CAATGGCCACAAGTAAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33288 FBgn0053288 FBtr0301013 3 1 1 84 3L 21425829 21425848 GAAGATGCTAAGGGATTCGT 57 21425895 21425974 GCAGTTCATCTTCGATCCT 57 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038,FBtr0078289,FBtr0301602,FBtr0078290 1 4 4 80 3L 21066242 21066322 CATCCGATACGATCTTCGTC 58 21066364 21066383 GTTCTGGCTTTAGATTGGGT 57 NA Drosophila melanogaster 61 CG10581 FBgn0037046 FBtr0078326 2 1 1 76 3L 21027248 21027266 TATACTAACTGGGCCACCA 57 21027127 21027145 GTCCTCTATCCTGCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0078333 3 1 2 80 3L 20955086 20955105 AAACTATTGCGTACGGTGAC 58 20954872 20955043 TGTTAAATGAACCGTCGGC 58 NA Drosophila melanogaster 61 CG3634 FBgn0037026 FBtr0078272 3 1 1 83 3L 20801870 20801954 GGCACTTCGTTTATAGAGCA 58 20801806 20801824 ATTGCTGGACTCTGATTGG 57 NA Drosophila melanogaster 61 Gr77a FBgn0045474 FBtr0078281 1 1 1 130 3L 20730872 20731356 AACTCAGGCACACTATGCA 59 20730760 20730779 TTCTAGTATTGCACCCACGA 58 NA Drosophila melanogaster 61 CG13251 FBgn0037014 FBtr0078243 2 1 1 84 3L 20631425 20631444 ATACACCATCAAGGGACGAC 59 20631491 20631750 ATAGCAGTATCCATCGGCC 59 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0078222,FBtr0300452 3 2 2 60 3L 20465777 20465795 TACACCAAGAGATGTCGCT 58 20464243 20465755 AGAAATCATTGCAGTACTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Toll-9 FBgn0036978 FBtr0078240 1 1 1 80 3L 20357490 20357511 CACAACCGGTAGAAACTATACG 59 20357216 20357452 ATAGATTGGGATGAACTTCCGT 59 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 3 2 2 84 3L 20221372 20221390 CGTTTCACGATCTCCATGC 59 20221438 20221528 AGGTACACATCGCTAGGTC 58 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074855 3 1 3 117 3L 20212751 20213205 AGATGGGAGCAATCAATATGAG 58 20212655 20212673 ATGTATCCATAGCCCGACC 58 NA InUTR Drosophila melanogaster 61 CG7290 FBgn0036949 FBtr0074858 3 1 1 164 3L 20199021 20199113 AAGAAGCAAATAATGGGTGGAC 59 20198878 20198896 GTAGTAGGTCGAGCAGTCC 59 NA InUTR Drosophila melanogaster 61 CG32210 FBgn0052210 FBtr0074974 1 1 1 80 3L 19538454 19538472 TTTGATTTGCAGCGAGGAG 58 19538122 19538411 GAGGAATGAACGGTAACCTG 58 NA Drosophila melanogaster 61 CG32212 FBgn0052212 FBtr0074932 3 1 1 100 3L 19481055 19481132 TGTTCAAATACGCCGTCCT 59 19481196 19481214 GTAAGCCAGAGGACCAGTG 59 NA Nonspecific Drosophila melanogaster 61 CG32207 FBgn0052207 FBtr0074983 2 1 1 125 3L 19470940 19471014 TTAAATCCGACGTCCTTGTC 58 19470834 19470852 GGTAGGCCATTAGTACAGC 57 NA Drosophila melanogaster 61 CG32214 FBgn0052214 FBtr0273411 2 1 1 88 3L 19460504 19460581 TCAAATACGCTGTCGTCGT 59 19460633 19460651 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14085 FBgn0036859 FBtr0074992 1 1 1 80 3L 19266239 19266320 GTATGAGCAGGCTAAAGATCTG 58 19266361 19266379 TCATCCTCGTCAATGGAGC 59 NA Drosophila melanogaster 61 CG6812 FBgn0036843 FBtr0075025 1 1 1 84 3L 19056807 19057436 CAGGTATCAACCCTCATCGA 59 19057483 19057501 TCATCCAGGCGAAGTACTG 59 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075042 3 1 4 110 3L 18988586 18988604 AAAGAAGCAGAATGTCGGT 57 18985789 18985807 CATAGGTGATGGAGGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 1 1 1 104 3L 18600088 18600167 TGCTGGAGAAGTCTCACAG 59 18600234 18600253 TCATCGAAAGCATTGAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG7460 FBgn0036749 FBtr0075187 1 1 1 60 3L 17734714 17734733 GCGGATCATGTCATATGCAC 59 17734756 17734774 AAAGTTTCGGATGCTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7564 FBgn0036734 FBtr0075175 2 1 1 60 3L 17508177 17508198 ATTCACGACAATGACATACGTC 59 17508216 17508237 GGAATCCGAGATGTAACTTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13728 FBgn0036716 FBtr0075238 3 1 1 93 3L 17375414 17375635 CCTGGTGTACACAATAATGTCTC 59 17375343 17375361 GTCGTTCAGAGATTGCTGC 59 NA Drosophila melanogaster 61 CG7707 FBgn0036703 FBtr0075212 3 1 1 96 3L 17237322 17237340 TCAATACTGTGGAGTCCCA 57 17237399 17237481 CTCTGTCCACCATAGTTCTG 57 NA Drosophila melanogaster 61 CG7724 FBgn0036698 FBtr0075284 1 1 1 80 3L 17050822 17050920 CTGCATAACCAGAAGGAATATCTG 59 17050959 17050977 GATGAAGTGCGAGTCACAC 59 NA Drosophila melanogaster 61 a10 FBgn0011293 FBtr0075290 1 1 1 102 3L 17016489 17016559 TGTTGAAGGAGATCCTGCC 59 17016405 17016423 TTGTCGATGAGATGACGGG 59 NA Nonspecific Drosophila melanogaster 61 CG4098 FBgn0036648 FBtr0075361 3 1 1 172 3L 16601944 16601962 TACAACGTGCAGAATGGAC 58 16601734 16601810 ATGATATTCTTGCCGGTTGTC 58 NA Drosophila melanogaster 61 CG4098 FBgn0036648 FBtr0075361 1 1 1 170 3L 16601942 16601960 CAACGTGCAGAATGGACTG 59 16601734 16601810 ATGATATTCTTGCCGGTTGTC 58 NA Drosophila melanogaster 61 CG32155 FBgn0052155 FBtr0075459 2 1 1 88 3L 16228353 16228434 AGATAAATGGAGTCTTGTTGCC 58 16228483 16228501 CAAGTGGATGAGGTGTTCG 58 NA Drosophila melanogaster 61 CG18081 FBgn0036537 FBtr0075537 1 1 1 86 3L 15827893 15827911 AAGCAACAAGGACACAGTG 58 15827543 15827843 CATTTGCGACTTGCAAACG 59 NA Nonspecific Drosophila melanogaster 61 CG7579 FBgn0036528 FBtr0075581 3 1 1 80 3L 15676333 15676351 ATCAATACAATGCCTGGCT 57 15676217 15676290 TCTTGAGACATTGTGGATCC 57 NA Drosophila melanogaster 61 26-29-p FBgn0250848 FBtr0075766 3 1 1 97 3L 13987493 13987902 TTTCTCAGCTAATGCCACGA 59 13987962 13987980 AGAAGGGTTCCGCAATCTC 59 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 1 2 2 85 3L 13975943 13976212 GCGATACAGGAATACCGCT 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075761 3 1 3 109 3L 13967865 13968824 CACGATCTTTGTCTCAGGG 58 13968895 13968915 GGGATATTATGTGGCATTGTG 57 NA InUTR Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 1 2 2 80 3L 13954141 13954164 CCGTTTACATACAACTTAAGTCCC 59 13954201 13954290 ATATGTCGGAGTTGAGTCCTG 59 NA Drosophila melanogaster 61 CG4069 FBgn0036301 FBtr0075965 3 1 1 108 3L 12530132 12530217 CTGGGAGAAGCAAATATAGCTG 59 12530045 12530064 AATTGGATCGTGGAGTTGGT 59 NA Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0300028 1 1 2 121 3L 12527097 12527173 TCAACCAGCTAAATGGCAG 58 12527257 12527276 TTCTCAGTGTTAACCATGGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999,FBtr0075998 3 2 2 81 3L 12148417 12148435 GATTCCTGCTTGGCTTCTC 58 12148480 12148561 ACACAACGCAAATGACCAG 59 NA Drosophila melanogaster 61 CG11570 FBgn0036230 FBtr0076065 3 1 1 60 3L 11950292 11950312 CAGTGGAGTTCAGTATACCAG 57 11950252 11950270 GAGAGTTCTGACAATCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5906 FBgn0036217 FBtr0076071 1 1 1 60 3L 11863840 11863858 GATCAAGCCGCAATACAGG 59 11863798 11863819 ATAGATATCGTAGCCCAAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0076080 2 1 3 243 3L 11815068 11815089 CCGATTAGTCTGCATATCAGTG 58 11814495 11814513 GCATCATTCATTGCCTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 2 1 2 60 3L 11246057 11246817 AAAGATTGGACCAGCAGAC 57 11246841 11246859 TCTTGGACATCAGGTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 SuUR FBgn0025355 FBtr0076203 1 1 1 80 3L 11059304 11059322 GAGGTATTCAGTAAGCGCA 57 11059364 11059470 ACGAAAGTCCTTGATGTACTC 57 NA Drosophila melanogaster 61 CG32068 FBgn0052068 FBtr0113421 3 1 1 82 3L 10656660 10656762 TACTTTAAGATCAATGCGGACG 59 10656805 10656823 TCATCGTAGGTGTAGCCAC 58 NA Drosophila melanogaster 61 CG42536 FBgn0260644 FBtr0300949 1 1 1 87 3L 10623025 10623043 ATGCTTTGTTATTGGCGCT 58 10622893 10622974 CCAATTCGTGTGCAAGACC 59 NA Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 3 2 2 109 3L 10618183 10618201 GGTCTTCGATGTCTTCCTC 57 10618031 10618110 ACTCAATTGCCATGGTCAG 58 NA Nonspecific Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 2 2 2 61 3L 10618128 10618146 GCTATTGAGGCACTGACCA 59 10618024 10618103 AAGCCAAACTCAATTGCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 2 1 1 69 3L 10209382 10209461 TTCTGTTTCGCATCAAAGGC 59 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ilp4 FBgn0044049 FBtr0076372 2 1 1 67 3L 9797084 9797103 GGCACTGGATGTGATTTGTG 59 9796975 9797054 CATCCTTAGACGCACTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Or67b FBgn0036019 FBtr0076420 1 1 1 80 3L 9621474 9621554 TGAAATGACCTTGACTTACCC 58 9621414 9621433 AAGCGAATCACATAGGAAGG 57 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535,FBtr0076536 2 2 3 94 3L 9154428 9155849 AGATTGACTATAACCGCATCG 58 9152838 9154372 GTGTAACCGAAGCTTTCGA 58 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0112791 3 1 6 103 3L 9043447 9057571 GAAATACGCAAACAAGACACC 58 9043364 9043382 TTCTTCAACAGCGACTTGG 58 NA Drosophila melanogaster 61 se FBgn0086348 FBtr0076623 3 1 1 72 3L 8514300 8514324 TGGAGAGGATTATAACTACGATCAG 59 8514411 8514429 ATCTCGTTTCATGCGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 1 5 5 194 3L 8349036 8349116 ACTGCCTATAGAAGCTCGC 59 8348860 8348878 GAACTGGATATGCTCGCAG 58 NA Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 1 1 1 114 3L 8185425 8185534 CGGATAAGACGACAAATGATGAG 59 8185333 8185351 AAGTAGCGCAGCTCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 mthl6 FBgn0035789 FBtr0076789 2 1 1 80 3L 7480007 7480028 AGTTTGTGCAGTACCTTATCTG 58 7480067 7480141 AGTTAGTGTAACCTGCTAGGG 59 NA Drosophila melanogaster 61 CG8541 FBgn0035788 FBtr0076862 1 1 1 60 3L 7464952 7464970 GACGACCACTTATGGTGCT 59 7464993 7465012 AGTCTTGGACACAATGGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 3 2 2 70 3L 7125769 7126228 GTTTCCGAGCAATTCAACG 58 7126262 7126280 AACTCGTCATCACTGGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 1 2 2 80 3L 7113838 7113926 ATGCGAAACCAAGAATATCCC 58 7113968 7113986 TTTGCTTCTCATCGCTCTC 58 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906,FBtr0076905 2 3 4 85 3L 7060850 7060868 TAATTGACCCGGACGACTC 59 7061141 7061159 ATAGCTACGCACAATACGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 3 2 2 240 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750323 6750341 CTTCTTAACGGCATCGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Cpr65Av FBgn0052405 FBtr0077024 2 1 1 156 3L 6132697 6132826 TACAACTTCGGCTACGAGAC 59 6132560 6132578 CATCCGCAATGTAGTGCAG 59 NA Drosophila melanogaster 61 CG6592 FBgn0035669 FBtr0077044 3 1 1 82 3L 6053481 6053500 AAGGGTCTTTACTGGTGTGG 59 6053545 6053621 CTCTTCGCCATGTCAACAC 59 NA Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 1 1 1 73 3L 5771740 5771758 TGGATCTTCCTTCCAACGG 59 5771623 5771705 TTTGTTTATGAACTCCTCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ir64a FBgn0035604 FBtr0077153 1 1 1 80 3L 5372131 5372151 CACTTTAATGTCTGGCACTCG 59 5372009 5372091 GGTATCCATGTCAACATGCAG 59 NA Drosophila melanogaster 61 CG15024 FBgn0040699 FBtr0290214 2 1 1 60 3L 4463116 4463134 GTAGAACCAACAACAGCCG 59 4463074 4463094 CCTGGTATTTGTATCCATGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302,FBtr0290123 2 2 2 187 3L 4446614 4446632 ATTGCTCGTTTGCTTCTGC 59 4447281 4447300 TATCAATGTACTCCGGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33514 FBgn0053514 FBtr0091456 2 1 1 120 3L 4365786 4365863 GATTCATCAAACGGGTGCC 59 4365947 4365965 CATGCACTCCAGCATTGTG 59 NA Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073210 2 1 2 184 3L 4104111 4104215 TGCTGAACTTATAGTTTCGCC 58 4104361 4104379 CACCAGGTTCAGCATTACG 58 NA InUTR Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073197,FBtr0073198 1 2 2 98 3L 4032378 4032469 GTATACCATGGGCTCTTTGAG 58 4032529 4032547 GTTTCCCGGATGATATGGG 57 NA Nonspecific Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 1 2 2 89 3L 3375959 3375979 GCGGAAAGATTTATATCGCGA 59 3376028 3376104 GCCAACAAGCGAATCTATCTC 59 NA Drosophila melanogaster 61 CG32485 FBgn0052485 FBtr0072985 2 1 1 84 3L 3050622 3050643 TCCAAAGCAGTATCACAATGAC 59 3050688 3051013 TAGAATGGCCTGAAATGCG 58 NA Drosophila melanogaster 61 CG9970 FBgn0035380 FBtr0073010 3 1 1 60 3L 2915332 2915350 TTGGTGGGTCTATCACGTC 59 2915290 2915310 CTGGTATGGGAAGTCAATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14949 FBgn0035358 FBtr0072949 1 1 1 110 3L 2642874 2643202 AAGAATCTCTATGTGGTCAAGG 57 2642785 2642803 GTAGAAGGTCAGATCCACG 57 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302675 3 1 12 90 3L 2462942 2462961 AACTAGTGACAGACAGTTCG 57 2463086 2463104 GATTGCTGAAGAAGGCCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 3 2 2 183 3L 2370044 2370119 TGCTGCTCTTACAAATCGT 57 2369879 2369897 TTCTCCACGCCTTCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 3 2 2 83 3L 2094062 2094080 ATTCTGTGTTCGTGTCACC 58 2093937 2094015 TAACGAGAGCCATGAACGA 58 NA Drosophila melanogaster 61 CG1927 FBgn0027547 FBtr0072853 2 1 1 81 3L 1967497 1969615 GGGTTATTCCATTAAGAACTGC 57 1967437 1967455 GAAGGCCGGTCTATTAACG 58 NA Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 3 2 2 137 3L 1821295 1821313 AACACAGGACCCATAGCAC 59 1821413 1821819 TGGCAACACGTAGACATAGG 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729,FBtr0302728 1 2 3 121 3L 1804304 1804322 AATACCTCCCAACAGTCGC 59 1804468 1804486 ATGCATGGATTGTCCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 1 3 3 101 3L 1621165 1621183 TGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 CG12502 FBgn0035171 FBtr0300345 3 1 1 110 3L 869859 869946 GAGTTTCGGAGTCAGTTATCTG 58 870017 870035 CGACTGATCCAGACTCTCC 59 NA Drosophila melanogaster 61 CG3386 FBgn0035152 FBtr0072611 3 1 1 127 3L 681442 681461 GATTTCTCCTCACCCAGGAG 59 681272 681290 TTCCGTGTTGAGATCTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 ttm2 FBgn0035124 FBtr0072507 2 1 1 60 3L 276339 276360 TGACACTACCCTCTTTGAACTC 59 276381 276399 GTCGATCTCACTCGTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972 1 1 2 110 3L 258395 258471 CAGAACTTGAAGATCCAAGAGG 58 258542 258560 GTCATCGTCCGAGAAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072527,FBtr0072526 3 2 2 81 3L 212492 212513 AGAGGATCGGAGAATAGTAGTG 58 212367 212452 GTACATGATGGGATTGCTGTC 59 NA Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072527,FBtr0072526 2 2 2 80 3L 212492 212513 AGAGGATCGGAGAATAGTAGTG 58 212368 212452 TACATGATGGGATTGCTGTC 57 NA Drosophila melanogaster 61 CG13876 FBgn0035109 FBtr0072484 2 1 1 84 3L 206255 206273 ACTGTTCTGCTACAGTTGG 57 206378 206396 TAGTGATCAGACGAAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-1175a FBgn0083005 FBtr0113527 3 1 1 89 2R 18494606 18494625 TTGTTGGAATTGTTGTCCCT 58 18494676 18494695 CATCTATAGCGTAGCTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2949 FBgn0082981 FBtr0113494 1 1 1 62 2R 4982895 4982914 GCAAATCGAGTTCTACTGGC 59 4982936 4982957 GCGCATCACAAATTAATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33450 FBgn0053450 FBtr0086442 1 1 1 60 2R 15617903 15617921 ATACATCGGTTCTCGTCCG 59 15617861 15617879 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2790 FBgn0027599 FBtr0072409 3 1 1 93 2R 20835332 20835351 AAAGAGCGCTTTATCCTACG 58 20835197 20835277 CTAAGTTGCGAACCTCTTCG 59 NA Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391 1 1 2 115 2R 20826352 20826501 CAGCTGAGCACCATAACTG 58 20826579 20826598 TTGTCATACCCATTGCTGTC 58 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 3 4 4 81 2R 20552130 20552148 GCTAAATCTATCGTCGGCG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 Ssl FBgn0015300 FBtr0072351 2 1 1 80 2R 20387168 20387188 TATGTTCTTTATGCAGCTGCC 59 20387048 20387128 AACTGGAAGCCATAGATACGG 59 NA Drosophila melanogaster 61 CG3356 FBgn0034989 FBtr0072262 2 1 1 80 2R 20088405 20088484 GGATTCTTTATGGTAACCACGG 59 20088520 20088543 GTGTTTCTCATAGTCTTCGAACAG 59 NA Drosophila melanogaster 61 CG11300 FBgn0034901 FBtr0072090 3 1 1 77 2R 19639866 19639887 CCAACCAGAGTAATCAGAATGG 58 19639925 19639943 ACAATAGACGACGGTGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 2 2 2 102 2R 19571834 19571905 AAATGCACCCATTCGTGAG 58 19571970 19571989 GCAAGAACCTCTTGTATCCG 58 NA Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072104 2 1 4 143 2R 19496194 19501997 CTTCCTGGTTGCTGTAAGG 58 19496069 19496087 GTTGTTGGGAAAGAGGTCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 chrw FBgn0015372 FBtr0072120 3 1 1 102 2R 19408476 19409589 AATTGCAAATCTGGGATACAGC 59 19408395 19408413 TGCGTTAGATCGAACACCA 59 NA Drosophila melanogaster 61 chrw FBgn0015372 FBtr0072120 2 1 1 99 2R 19408476 19409589 AATTGCAAATCTGGGATACAGC 59 19408398 19408419 GTTAGATCGAACACCAGAATGG 59 NA Drosophila melanogaster 61 CG13539 FBgn0034833 FBtr0071998 1 1 1 60 2R 19072036 19072057 ACATCTACTTGTCCCTACTCTC 58 19072078 19072096 TTGTGGCTTCCATCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9890 FBgn0034814 FBtr0071984 1 1 1 96 2R 18951567 18951585 TATATGGAGCACCGACTGG 58 18951435 18951507 ATTCGTGGGTGTGAAACTC 58 NA Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 2 2 2 217 2R 18935219 18935359 TGGCCACAAGATACATTGAC 58 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 3 1 1 68 2R 18535710 18535728 ACTAAACCGCATTGTGGGA 59 18535600 18535621 GGCACATAGTAATTAAAGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928 3 1 2 103 2R 18001831 18001849 TCTCCACATATGATCGGGA 57 18001915 18001996 ATTAAGGTTGCTGTCCAGAC 57 NA Drosophila melanogaster 61 CG4030 FBgn0034585 FBtr0071640 2 1 1 86 2R 16976491 16976572 TCAAACGCTTCAGATGTCG 58 16976423 16976442 GGACAGTTGTTCACATCGTC 59 NA Drosophila melanogaster 61 Cht8 FBgn0034580 FBtr0071534 1 1 1 81 2R 16949228 16949308 AACTCCTCAAAGAACGTTGTC 58 16949349 16949369 TATCCTCCATACCGAACTTGC 59 NA Drosophila melanogaster 61 CG16799 FBgn0034538 FBtr0086249 3 1 1 85 2R 16541095 16541115 CTTTCAGATCAACAGCAAGGA 58 16540896 16541050 CGTCATTGGAGAAGTCTTCAC 59 NA Drosophila melanogaster 61 Nnf1a FBgn0034523 FBtr0086257 1 1 1 80 2R 16473904 16474130 AAGAACTTGAGATTGCTATGGC 59 16473845 16473863 TCAATTTCAGGCGCTTGTC 59 NA Drosophila melanogaster 61 CG13427 FBgn0034514 FBtr0086268 1 1 1 60 2R 16426738 16426756 CATTCTTCTGCTGAGCAGC 59 16426696 16426716 ATCGTCGTTATCAGGAAATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11242 FBgn0034451 FBtr0086502 3 1 1 91 2R 15374160 15374180 AGGTGAATGTTTCCAACTCTC 58 15374037 15374107 AAGTTTGGTCTTGAGCTGG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0100393 2 1 19 135 2R 15353169 15353188 ATCATCCAGTGACAAGGCTC 59 15353747 15353765 AAACGTATTTGCGTTGGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0301882,FBtr0114605,FBtr0086543,FBtr0086544 2 6 6 80 2R 15319060 15319145 TGTGAATATCGCAAGAGTATGC 59 15319001 15319021 CGAATCGACAACATCAAACAG 58 NA Drosophila melanogaster 61 CG34197 FBgn0085226 FBtr0112390 3 1 1 60 2R 15289849 15289868 ATCATCGTTAGAACTCGCAC 58 15289808 15289827 GTCGTCTTCTGTTGTACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10073 FBgn0034440 FBtr0086523 2 1 1 80 2R 15271567 15271585 TAGCTCCACCCAAATTGGT 59 15271628 15271704 AAGATTCGTCGTACATGCAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290311,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 1 12 12 96 2R 15059778 15059864 CTGATATGCTCATCACCTTTGAC 59 15059920 15059938 TTGTAGTGGGAGGTCTCCA 59 NA Drosophila melanogaster 61 botv FBgn0027535 FBtr0086579 3 1 1 91 2R 15017991 15018069 GAATCAAGAGCACCGTGTC 58 15018122 15018142 GATCTTCTGGTTGTACTGGCT 59 NA Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 2 1 1 170 2R 14858435 14858453 ATCGACATGATGGAGAGCG 59 14858216 14858301 CTTCCAATCGTTTAGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528,FBtr0299527 3 2 2 89 2R 14572325 14572343 CAATGTCTACGAAGCGGAG 58 14572199 14572217 GGTATGGAAAGATCACGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528,FBtr0299527 2 2 2 88 2R 14572325 14572343 CAATGTCTACGAAGCGGAG 58 14572200 14572219 GTATGGAAAGATCACGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6370 FBgn0034277 FBtr0089559 3 1 1 80 2R 13652664 13652684 ATTCCTCTTTGTCCAACTCCT 59 13652545 13652625 TAGGCTTGACTTCCTTATCCTC 59 NA Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 1 1 1 193 2R 13553664 13553744 CCAATTCAGCGACGATGAG 59 13553901 13553919 CCTCCTTTGAGATGACCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Dcr-2 FBgn0034246 FBtr0086904 3 1 1 81 2R 13466224 13466309 CACAATTTACAGCGATCCCA 58 13466162 13466183 ACTGTAGAGTACTTTACACGCT 59 NA Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 3 1 1 193 2R 13454715 13454734 GCTCGAAGTACATTGAGGAG 58 13454483 13454559 TAGATTGATGAGCGCACCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 1 1 1 147 2R 13405584 13405606 CTCAATGGATGAGGATATAACCG 58 13405400 13405477 ACGCTCTACACCAAATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 3 5 5 182 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400435 13400455 GACTAAGGAACTCAGAGTGGG 59 NA Drosophila melanogaster 61 Sod2 FBgn0010213 FBtr0087078 2 1 1 90 2R 12661143 12661278 AAATTTCGCAAACTGCAAGC 59 12661072 12661090 CAGATGATAGGCTCCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34457 FBgn0085486 FBtr0112763 3 1 1 80 2R 12558752 12558771 GCATACACGAATTGGTTCTG 57 12558809 12558887 GGAATTGCTAGGTATATCTTCTCC 58 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 1 4 4 91 2R 12416663 12416686 CACTGATCTGTATAATACTTCGGC 59 12416735 12416872 AGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 l(2)k07824 FBgn0022070 FBtr0087170 1 1 1 60 2R 12233634 12233652 GAGAAGCGCTTCATGAACC 59 12233592 12233612 CAGATGAGTGATTGAACTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 2 2 2 88 2R 12229045 12229063 AGGATCTGTACGATGCCAG 59 12228916 12228993 GAAAGTTACGCCATTGGGA 58 NA Drosophila melanogaster 61 lbk FBgn0034083 FBtr0302084 1 1 1 80 2R 12053601 12053622 TAATAATCGCCTAAGCACTCTG 58 12053661 12053745 TGGTTAAAGTTGAGAGCTAGC 58 NA Drosophila melanogaster 61 CG10734 FBgn0034082 FBtr0087250 1 1 1 160 2R 12046095 12046192 GAGCTGAGAAGTCAAAGCC 58 12045953 12045971 TTGCCTTTAACATCGACGC 59 NA InUTR Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204 3 1 2 101 2R 11895985 11899473 TACATCAACCAGCTTAATCTCG 58 11899535 11899553 ACCACAATCCATCCGTAGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 2 5 5 97 2R 11826473 11826549 GAACGCTGATATTGGTGGC 59 11826394 11826412 CCTGGTAGATCTGAGGACG 58 NA Drosophila melanogaster 61 CG8093 FBgn0033999 FBtr0087401 2 1 1 92 2R 11102936 11103026 GTTCGGTGACAACTGTCAC 59 11102862 11102881 GCATTGTGAGGATGTAACCA 58 NA Drosophila melanogaster 61 Cyp6a9 FBgn0013771 FBtr0300128 2 1 1 81 2R 10767788 10767808 ATTGGAAAGTACAACGGAGAG 58 10767674 10767748 GAAGGGTTTCCGATATAACCTG 58 NA Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087445,FBtr0087444 3 2 2 64 2R 10696990 10697008 CTCCTCTTACACCCAGCAG 59 10697098 10697116 CGAAACGCTCATCAAAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Spred FBgn0020767 FBtr0087468 3 1 1 112 2R 10651494 10651573 GATCAGAGCGTCATCTTGAG 58 10651401 10651420 TGAAATGTGAGTCCATTCCG 58 NA Drosophila melanogaster 61 CG17386 FBgn0033936 FBtr0087488 2 1 1 60 2R 10308987 10309005 GGATGAATCGTCGGAAGAG 57 10309028 10309047 TATGATGTGATTGTCCACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango7 FBgn0033902 FBtr0087579 1 1 1 83 2R 10051636 10051710 TCCATCATGATCACGATACCC 59 10051573 10051591 AAGATTGGGAGCCTTGGTC 59 NA Drosophila melanogaster 61 CG13016 FBgn0033899 FBtr0087519 3 1 1 90 2R 10045871 10045889 GCTATCCTTGGGTTTCTGC 58 10045943 10046015 CAGGTAGATGACCACAGGA 58 NA Drosophila melanogaster 61 CG13344 FBgn0033884 FBtr0087586 3 1 1 97 2R 9749528 9749547 TTTCAGGTGTCTCAAATCGA 57 9749607 9749687 CACTTCGTCTTGTAAAGCG 57 NA InUTR Drosophila melanogaster 61 Roe1 FBgn0014877 FBtr0087675 3 1 1 128 2R 9442173 9442536 TGCCCAAGGATAAGCTCAG 59 9442628 9442646 TCTGGTTGATGGGATCCAG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299741,FBtr0299740 3 2 6 108 2R 9152886 9152971 ATATACAAGCAATCCACTTGCC 59 9153040 9153058 TCCCTTCACGAACTCACTC 59 NA InUTR Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 2 2 6 88 2R 9148387 9150154 GACAGTCTTCCAGGTTACCC 59 9150205 9150223 CGTCCTCCTCGTTGATCTC 59 NA Drosophila melanogaster 61 CG17059 FBgn0040754 FBtr0087739 1 1 1 87 2R 9107946 9108274 ATGGAAATGGACGAGTCCG 59 9108325 9108343 TGTAGAAGTCAGCGTGGAC 59 NA Drosophila melanogaster 61 Nrk FBgn0020391 FBtr0087728 1 1 1 97 2R 9048806 9048884 CATGTGTCCGGATTATGTGG 58 9048942 9048962 CAGCCAAGAGAAAGATCATCG 59 NA Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 1 2 2 80 2R 8887545 8887659 GGAACTTATAAGCTTATCCCTGG 58 8887699 8887717 TAAATAGTGGGAGGCACCT 57 NA Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 1 2 2 80 2R 8588055 8588132 CGCAAGATGTATGAACTAAGTC 57 8588172 8588191 CTCGTAGATCTCCTTCTCCA 57 NA Drosophila melanogaster 61 Ak6 FBgn0033754 FBtr0087891 1 1 1 80 2R 8457109 8457199 CATACTAATAACCGGAACTCCTG 58 8457051 8457071 AGCCACTCAAACTTTAGTTCG 58 NA Drosophila melanogaster 61 CG33775 FBgn0053775 FBtr0091776 3 1 1 83 2R 8452229 8452249 ATTTACTTGGAAGAGGTCGTG 58 8452095 8452187 CCCAATTAATCCAACAGTTCTC 57 NA Drosophila melanogaster 61 CG30034 FBgn0050034 FBtr0088097 1 1 1 80 2R 7409059 7409456 TACACGGCTCCATAAATGCT 59 7408998 7409016 GACACGTGTCCGTAGTCTC 59 NA Drosophila melanogaster 61 CG30033 FBgn0050033 FBtr0088117 2 1 1 86 2R 7180078 7180096 TCAGCTTGTGTCTCTTGGT 58 7180146 7180223 TGAAGTATGCTCCCACCTG 59 NA Drosophila melanogaster 61 Vhl FBgn0041174 FBtr0088115 3 1 1 61 2R 7167595 7167613 GTTCCGGGATTACTACACG 57 7167638 7167656 TCGGCTGAAAGATCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 1 1 1 143 2R 6308242 6308260 CAAGGAGTACCTGCTCCAC 59 6308059 6308137 GGAGGTAGGCAATTTGATGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18011 FBgn0033491 FBtr0088332 1 1 1 80 2R 6030633 6030706 CGAGCATGAGGATGTTATGG 58 6030748 6030767 TGAGCTACCAATCTAGACGA 57 NA Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088330 3 1 2 88 2R 6027684 6027702 ACTTTGCAAGCCGATTTCG 59 6027753 6027864 TCTCGTCAGATAACACAGCA 58 NA Drosophila melanogaster 61 CG12917 FBgn0033490 FBtr0290287 2 1 1 105 2R 6025374 6025456 CTTTCTGGCTTGGGAAGTG 58 6025525 6025543 CAGCTGGATAGATCCGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1381 FBgn0033485 FBtr0088425 2 1 1 128 2R 5986887 5986973 GATAAGAAAGTTTCCCTGACCA 58 5986780 5986799 CCTCATGTTCTGAACTTGGA 57 NA Drosophila melanogaster 61 Lsm11 FBgn0033450 FBtr0088485 3 1 1 60 2R 5726618 5726636 ATTCTACCTCCTGAGCGAC 58 5726576 5726597 TCTTTCTGCTACTAGTGGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13955 FBgn0033412 FBtr0088551 2 1 1 81 2R 5310883 5310901 AAATGGAGCGATTGAAGCG 59 5310762 5310838 TCGGAGTTCTCAATCTCCC 58 NA Drosophila melanogaster 61 CG30343 FBgn0050343 FBtr0088594 1 1 1 153 2R 5139744 5139762 ACTTCACAACTGTAAGCCC 57 5139879 5139897 TAGTTGGGTTGGAATTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13749 FBgn0033353 FBtr0300706 3 1 1 80 2R 4821201 4821221 GATCACGTCTATACGGATGAG 57 4821262 4821340 TCTAAGCGTATGTGTTCCTG 57 NA Drosophila melanogaster 61 CG8247 FBgn0033348 FBtr0290033 3 1 1 80 2R 4808335 4808354 GCTACCCACAAATACCTTGG 58 4808211 4808296 GTCCGTAAACTTTCTCTTCTCAG 59 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 2 1 1 77 2R 4793082 4793164 ACAATTGTGGCCTTCAGGA 59 4793023 4793041 GAAGTTGTCGGTAGCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8272 FBgn0033337 FBtr0088686 2 1 1 60 2R 4777366 4777385 CTCTTTAGAGCACTGCAGTG 58 4777262 4777286 CTTGGATATGTTTATACCTGTGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14743 FBgn0033326 FBtr0088722 2 1 1 80 2R 4599685 4599703 TCATCATCGAGCTGGTGAG 59 4599562 4599643 AGATACTCAGTAGGATGGCAC 58 NA Drosophila melanogaster 61 Vps25 FBgn0022027 FBtr0088694 1 1 1 80 2R 4513068 4513140 CACCCTTCTTTACACTACAGC 58 4513177 4513200 GGTATTTGAGAAAGAGATCTGTCC 59 NA Drosophila melanogaster 61 CG30369 FBgn0050369 FBtr0088795 1 1 1 62 2R 4146918 4146936 TCCTTTGGTCGAGTTCTCG 59 4146962 4146980 ATGCAAACTTCTGTTCCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 3 2 2 182 2R 4020283 4020454 GGCGTCAAATAAAGGTAATGTC 58 4020662 4020680 AAGGAGCGTAGTAATTGGC 57 NA Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 2 2 2 84 2R 3992948 3993037 CTTTAAGGATAAGCCTACACTGC 59 3992886 3992904 GAGTTGGATGGCGATAACG 58 NA Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 3 2 2 82 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720262 3720280 GTCCGGATCACTCCTATGG 59 NA Nonspecific Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 3 1 1 111 2R 3561475 3561553 TAGGTGCCAACCAGAAGAG 59 3561382 3561400 GCCTTAAGGCGTTCATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Vps13 FBgn0033194 FBtr0088910 2 1 1 80 2R 3461880 3461898 CAAGCACTCTATTCGCTCC 58 3461942 3462019 TTTGGAACTTCGTGACTGG 58 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 3 1 1 103 2R 3399275 3399350 TAAAGCTGGTGTTCACAGAG 57 3399191 3399209 ATTGCAGAAGTGCTTGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 dpa FBgn0015929 FBtr0088982 1 1 1 80 2R 3384511 3384530 AAGAAGGGCAAAGTTCTCAC 58 3384390 3384469 GCGTGTGATCATAATTTGGG 57 NA Drosophila melanogaster 61 CG12835 FBgn0033142 FBtr0089040 2 1 1 60 2R 2995162 2995180 CCCAGATAGCAAGGATCCA 58 2995203 2995222 TTCAGGTTCCTCAGATCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Er FBgn0033139 FBtr0089036 2 1 1 80 2R 2952947 2952966 TTACCAAGCTGAAACAAGCC 59 2953009 2953198 AGCACTGGTACTGTGTCTG 59 NA Drosophila melanogaster 61 CG14589 FBgn0033063 FBtr0085978 2 1 1 100 2R 2025679 2025697 GATTGCCGATCCGAATTCG 59 2025760 2025831 AGATCATGCCTTGCAATTCG 59 NA Drosophila melanogaster 61 CG30440 FBgn0050440 FBtr0086076 3 1 1 81 2R 1381447 1381465 AAACGTACAAAGCCTGCAC 59 1379607 1381402 TGTATCCTCAGTCCTTGCC 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063,FBtr0299920 2 4 4 168 2R 1311591 1311614 GCCACTTAGATTTCTCTACTAGTG 58 1311741 1323171 CATACTTGACACGCAGCTC 59 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0085939,FBtr0299904,FBtr0085938 3 3 4 80 2L 22156807 22158522 AAATTCAAGGTGCTGGCTG 59 22158566 22158584 CTGTTGTCAATGACGGGTG 59 NA Nonspecific Drosophila melanogaster 61 CG11634 FBgn0032968 FBtr0085930 1 1 1 60 2L 21916627 21916646 GAAGAAGGCGACATCAACAG 59 21916666 21916687 CAAAGGGATTATGAACCGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085906 1 1 2 107 2L 21829829 21829847 CGAGATCTACAGACAGGCG 59 21833430 21833448 GAGTTTGAGTCGTGTGACG 58 NA DesignNoJunction Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173,FBtr0085925 3 2 2 107 2L 21587415 21588993 GCCATAAAGGATGTAAACCCA 58 21587328 21587346 TTTATTGGGTGAGCCTTGC 58 NA Drosophila melanogaster 61 His1:CG33864 FBgn0053864 FBtr0091868 1 1 1 60 2L 21536561 21536580 AGTTGAGAAGAAAGTGGTCC 57 21536603 21536621 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 3 2 2 80 2L 21077745 21078099 ATTCTCATATTGGGCCGCA 59 21078143 21078161 AGTGACGAGGAAGACAACC 59 NA Drosophila melanogaster 61 CG2614 FBgn0032873 FBtr0081388 3 1 1 80 2L 20657190 20657272 GAAATACTAAGAACCATGAGGAACG 60 20657307 20657328 CAGTAGGAAATTGAGGATGTGC 59 NA Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 1 2 2 84 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891877 19891898 ATTCTTGTCGTACTTCTTGCAG 59 NA Drosophila melanogaster 61 msb1l FBgn0027949 FBtr0081258 1 1 1 170 2L 19577967 19578051 CTTTAACCTTCTTGCAGGCG 59 19578184 19578202 GAACCTCATCGAGGACCAG 59 NA Drosophila melanogaster 61 Rab9 FBgn0032782 FBtr0081206 3 1 1 91 2L 19433055 19434677 ACTCTGCAGATATGGGACAC 59 19434730 19434749 TAGCAGAGCAGACAGATGTC 59 NA Drosophila melanogaster 61 l(2)37Cg FBgn0086447 FBtr0081161 3 1 1 77 2L 19133218 19133236 TCTGTGGCTACACGATTCC 59 19133159 19133177 CTATGGCTCTGTCTCGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)37Bb FBgn0002021 FBtr0081177 1 1 1 95 2L 19051024 19051104 ATGACACGTATGCCCAGTC 59 19050947 19050967 CGGCAAATAGTGACATTTGGA 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 1 4 4 107 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856752 18856772 CATATAAGGATGCTCCTTGCC 58 NA Drosophila melanogaster 61 msl-1 FBgn0005617 FBtr0081130 3 1 1 84 2L 18687243 18687262 AGAGGATGATTATCCGTGGA 57 18687118 18687199 AAGGTAATTCTGATTCTGCCAG 58 NA Drosophila melanogaster 61 CG10413 FBgn0032689 FBtr0081080 3 1 1 80 2L 18602871 18603720 CCACCAATAACACGATACCC 58 18602810 18602829 CATTCAGCCCTGTATAGTCG 58 NA Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 2 1 1 123 2L 17411613 17412807 ATCAGGGAGCTGCTTTCTG 59 17412894 17412912 GTCTTAGCCGAATCCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6380 FBgn0032632 FBtr0080970 2 1 1 60 2L 17291272 17291294 CTCCTGCTCGTATATGTAAATCC 58 17291234 17291255 GTCTCTTTCTTAGAAGTGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12288 FBgn0032620 FBtr0080957 3 1 1 99 2L 16901797 16901815 GAGAAGGAACCAACGACTG 58 16901653 16901735 GCTTAACTCCTTCTTCGTCC 58 NA Drosophila melanogaster 61 CG42231 FBgn0087041 FBtr0273183 2 1 1 60 2L 16342747 16342835 GAGATCTGGTTCGGTTCAC 58 16342705 16342723 AAATAATGCCACCGGATCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13258 FBgn0032582 FBtr0080853 3 1 1 86 2L 16292722 16292969 TGGGTTTCAGAATTGTGCT 57 16292654 16292672 GGATCTTCACCCAATCCTG 57 NA Drosophila melanogaster 61 CG4168 FBgn0028888 FBtr0080716 1 1 1 80 2L 15171529 15172144 CCGGTTTGAGTTCATGCAC 59 15171467 15171485 AAGGTCTCATCGTCGACAC 59 NA Drosophila melanogaster 61 CG42313 FBgn0259213 FBtr0299711 3 1 1 80 2L 14923068 14932521 TGTCGTTTATCCTCCCTTGG 59 14923007 14923025 TAAACATCGTCGCCTTCCT 59 NA Drosophila melanogaster 61 CG31775 FBgn0028537 FBtr0301739,FBtr0080691 2 2 2 79 2L 14737635 14737720 TGATCCTCTTCATTGCCCT 58 14737574 14737592 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33681 FBgn0053681 FBtr0091661 3 1 1 95 2L 14005729 14005747 CACTGTTGGAGCTTGTAGC 58 14005803 14013476 TCTCGTAATCGTTAACAGAACC 58 NA Drosophila melanogaster 61 CG16884 FBgn0028544 FBtr0080557 3 1 1 170 2L 13946038 13947096 AAGTATTCATCTGCTTAGCCG 58 13945888 13945906 AGATGGAACCATGTCCCAG 59 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 2 1 2 245 2L 13782945 13783014 CTAAATGCGCTGGTCAAGG 59 13782718 13782736 ATCCTTTGAGTCTGTGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33643 FBgn0053643 FBtr0091620 2 1 1 116 2L 13531345 13531363 GATTAGATGCCTGCCTCCT 59 13531441 13531513 AGTTGAAGTTCGCTTTCAGAG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0089911,FBtr0302141,FBtr0302139,FBtr0302138 2 5 9 88 2L 13267964 13271306 GGAATTGTCGTATGGACAGC 59 13271357 13271375 TTGTCATCATCGCGTTCTG 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 2 4 4 83 2L 13209771 13209789 GTGAACTCCTACAAGGGCA 59 13209836 13209919 ATTGACAAACTTGCAGGCC 59 NA Drosophila melanogaster 61 CG5204 FBgn0032473 FBtr0080433 1 1 1 69 2L 13162327 13162345 TATTGCGGCGTAGAAACAG 58 13162435 13162453 AATCTTCGGGTTCCTCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 2 1 1 112 2L 13071857 13073281 GTTCGTATGTGTAATGGTTGGA 58 13071766 13071786 GGACGAAGATAATGATACCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5075 FBgn0032464 FBtr0080421 2 1 1 129 2L 12979933 12979953 GCAATTCACCACTCTTGACTG 59 12980044 12980125 TATTTGGACAGGGCCTGTG 59 NA Drosophila melanogaster 61 Gr33a FBgn0032416 FBtr0080337 2 1 1 94 2L 12139074 12139093 GATGACGATTTGGACACCAG 59 12139150 12139654 GCTTCCGATGTGTTTCCAG 59 NA Drosophila melanogaster 61 prd FBgn0003145 FBtr0080299 3 1 2 148 2L 12085077 12085150 TCTACCTAACATGAACAGCG 57 12084948 12084966 GTAGCTGTCTGGAGATCAC 57 NA InUTR Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 3 2 2 96 2L 11852014 11852090 CTTTAAGCGGTCCTATCCC 57 11852148 11852168 CTGGCTAAGAAACTCTGAGAG 57 NA Drosophila melanogaster 61 CG42470 FBgn0259960 FBtr0300308 2 1 1 80 2L 11753391 11753466 TCAAATCCATGCTTTGCAGG 59 11753330 11753350 GGGCATTTCTATCGAATACCC 58 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 2 2 2 81 2L 11092420 11092440 TGATGTATGTAATCCTCGCAG 57 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 1 4 4 200 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965647 10965665 GTTGTAGTACTCCAGGGCG 59 NA Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0290229 1 1 2 269 2L 10770872 10770890 CATTACAACAAACGACGCG 58 10771184 10771202 AAGAGATTGATGCGCTGGT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 1 1 1 177 2L 10737751 10737878 ATCTAATCTCACCCAAGCCT 58 10738018 10738036 CAGTGGAAGGTGAGATCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031,FBtr0080030 3 2 2 80 2L 10459014 10459033 ACTACCAGGATAAGGACGAG 58 10459076 10459152 CTTCCTCTCCCAAATTCGC 58 NA Drosophila melanogaster 61 CG5337 FBgn0032249 FBtr0080043 2 1 1 111 2L 10433937 10433955 CACCAATCCGTTCTTCTGC 59 10433770 10433864 ACTCATACCCTGGGAATAGGA 59 NA Drosophila melanogaster 61 CG34109 FBgn0083945 FBtr0300423 3 1 1 98 2L 10107477 10107763 GTTACAGCCGACTCTTTGG 58 10107825 10107843 CATTACGGGACCCATAAGC 58 NA Drosophila melanogaster 61 Pen FBgn0011823 FBtr0079937 2 1 1 93 2L 10058686 10058704 AAACTGCTGCAAATGGACG 59 10058759 10058856 CAACGTCAGTCTGTTGATCTG 59 NA Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 1 2 2 251 2L 9967697 9967715 GAAGACCTGGTTCAACCAG 58 9967991 9968009 GATTTGTTCTTGCGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5853 FBgn0032167 FBtr0079894 3 1 1 80 2L 9942218 9942236 GAAATTGGTGCCGTTCCTG 59 9942098 9942176 GCGAGCTCGATAATGTAATCC 59 NA Drosophila melanogaster 61 CG4017 FBgn0032143 FBtr0079867 1 1 1 73 2L 9767734 9767752 CGGTTATGTCTACACCCAC 58 9767843 9767861 CAACGCAGTTCTTGTCCTG 60 NA DesignNoJunction Drosophila melanogaster 61 und FBgn0025117 FBtr0079866 2 1 1 111 2L 9764614 9764634 TCGCAACTTAAATGGACACTC 59 9764828 9764846 GGCGTAGAATTCATCCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31883 FBgn0032122 FBtr0079829 2 1 1 60 2L 9528570 9528588 GACTACCTTAGGACTCCGT 58 9528609 9528630 AAATCTTAACAGTAGGGTCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 3 5 5 80 2L 9537735 9537818 GATTATTGCTACGACAAATGCG 58 9537855 9537877 GTGTTTCTTAGACTTGGTCTGTG 59 NA Drosophila melanogaster 61 CG9463 FBgn0032066 FBtr0079744 2 1 1 87 2L 8768646 8768667 GAGTTCTGTAAAGAACTTGGCC 59 8768522 8768602 GGGACATGACTCATAACAAACAG 59 NA Drosophila melanogaster 61 CG8353 FBgn0032002 FBtr0079593 3 1 1 60 2L 8214454 8214473 AAGAATGAGGAGGTTGTGAC 57 8214678 8214698 CTGTCAGAAGTTCTTGAACCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935,FBtr0301187 2 2 2 102 2L 8213439 8213457 ATGGCACCATATACTCCGG 59 8213523 8213792 CGTTTGCCTTCACTGATGG 59 NA Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 1 2 2 80 2L 8200025 8200113 TTTATGCTGGCCACTATAACC 58 8200153 8200173 GCTATTGAAGACAAACTGCTG 57 NA Drosophila melanogaster 61 CG14535 FBgn0031955 FBtr0079564 2 1 1 119 2L 7847888 7847907 GTGCACATCCTCTATCAGCT 59 7847648 7847809 GCTGATCAAATTGTTGTCTTGC 59 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 1 2 2 80 2L 7386640 7387986 GACAGATTGGTGGAAACTTGG 59 7386580 7386600 CGTGGGCGTAAATAGATACTG 58 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 2 3 3 95 2L 7100547 7107150 GCACTTCTTCGTGAAGAGC 59 7100470 7100488 TAGGTCGATCGTTCGATGC 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 1 2 2 134 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018954 7018974 ACCGTATTTCAGATCTCCCAG 59 NA Drosophila melanogaster 61 nrv1 FBgn0015776 FBtr0079384 2 1 1 96 2L 6780279 6786290 AAAGTTGGAGTCAGCTACTG 57 6780202 6780220 CTGATGGTGGACAGAAGAC 57 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 3 3 3 92 2L 6770400 6770418 CGGACTACGAGATCATCGA 58 6770262 6770347 GTTTGTTATCTGGTGTCTTGGT 59 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 3 2 2 88 2L 6640925 6645982 TTGGAAGCAAGTATACCTCGT 59 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 CG11043 FBgn0031831 FBtr0079289 2 1 1 232 2L 6559704 6559778 AAAGTCAGCGCTAATTGCG 59 6559974 6559992 CCTCGTCCTTCTCAATCCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG13982 FBgn0031811 FBtr0079256 3 1 1 178 2L 6412697 6412715 CTTCTCCATGGGTTCATGC 58 6412856 6413197 CAGATCTGTTCTTTCGCCAG 59 NA InUTR Drosophila melanogaster 61 CG31644 FBgn0051644 FBtr0079159 1 1 1 89 2L 5818276 5818371 GTTTAAGTTTCCCATGCATGAC 58 5818208 5818226 AGAAGTGGAGCTAACAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14006 FBgn0031733 FBtr0079167 2 1 1 60 2L 5728722 5728740 CTGCTCGCTTTCGTTATCC 59 5728680 5728698 TATCCCAGTTCACGAACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18266 FBgn0031724 FBtr0079109 3 1 1 60 2L 5598251 5598269 ACTGGATGAAACAGGTGGA 58 5598292 5598311 GTGTCAAAGCCCTGATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14013 FBgn0031720 FBtr0079121 3 1 1 81 2L 5553325 5553398 CAAGATACTATCGACCATCGT 57 5553264 5553283 CATGTCCAGGTCTATGTAGC 57 NA Drosophila melanogaster 61 CG31648 FBgn0051648 FBtr0079098 3 1 1 60 2L 5527654 5527673 TTCTTCTACATCGATCCCGA 58 5527696 5527714 TGATGGTGTCACAGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 3 3 3 81 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 CG14020 FBgn0031707 FBtr0079094 1 1 1 60 2L 5518439 5518457 GGACGCAACATCAAGACTC 58 5518481 5518499 TTCCGTTGGTAGAGTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bub1 FBgn0031696 FBtr0079069 1 1 1 96 2L 5281904 5281922 AAGCCACTGATTCTCGGAC 59 5281982 5282084 CGTTTCAGCACCTGATCAC 59 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0079032 2 1 2 90 2L 5050008 5050666 TTCATCAGTCGAACACGGA 59 5049936 5049956 GCACTATTCTCGAACTCATCC 58 NA Drosophila melanogaster 61 jet FBgn0031652 FBtr0079057 3 1 2 97 2L 4948901 4948919 CTATCTCCGACTATGGCGT 58 4948696 4948714 CAGGGAGAGTTCTGTGACC 59 NA DesignNoJunction Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 3 6 6 104 2L 4909614 4909687 CATTCTATGGGTTTCCGCTG 59 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 3 4 4 80 2L 4343685 4343764 CATTCTGACCTTTCCCACC 58 4343807 4343826 AAGTAGAAGGCCTTCAAGGA 58 NA Drosophila melanogaster 61 CG31958 FBgn0051958 FBtr0077495 2 1 1 64 2L 3786138 3786156 AGATGATACGCGAGTACGA 58 3786184 3786202 CATGTTGTTGGACTCCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 1 1 1 110 2L 2695978 2696055 CAAACCCTTCTACTGCTTGG 58 2695887 2695905 ACGAACAAGGCCATATGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 3 2 2 97 2L 2718916 2719014 ATCATTATGCTGACTTCCTGGA 59 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 CG34448 FBgn0085477 FBtr0112752 3 1 1 96 2L 2416921 2416999 TCTCAGAAGATGCGTCTGG 59 2416843 2416862 TCCGAAACGTCAAATTCGAC 59 NA Drosophila melanogaster 61 CG3557 FBgn0031423 FBtr0077790 2 1 1 101 2L 2385444 2385517 GTCGAATGAAGGATCAGCT 57 2385361 2385379 GAAGATGGATAAGCCGAGC 58 NA Drosophila melanogaster 61 CG42371 FBgn0259717 FBtr0299970 2 1 1 81 2L 2217067 2217085 ACACTGTTTGTCCTCGAGG 59 2216951 2217022 GACGAAACTCTCGATTCGT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15362 FBgn0031378 FBtr0077814 1 1 1 60 2L 1981795 1981814 ACAAGATCAGCTTTATGCCC 58 1981890 1981908 AATTCCCGAATCGCATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr22e FBgn0045497 FBtr0077888 2 1 1 86 2L 1785006 1785024 TGGGAGACAAACTTCCACC 60 1785072 1785147 GCAAAGTCCGTGATACTTCTC 59 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010,FBtr0077917 1 2 2 121 2L 1586941 1586959 CTTTGCATGTCCTGCTCAC 59 1586775 1586859 GTTACCCAAGGTCAGTAAACTG 59 NA Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918,FBtr0114554 2 2 2 60 2L 1517873 1517891 GAACATCCGGCAGTATGAC 58 1517831 1517854 CTTGAAGTTTATCTCCTGGTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 1 2 2 60 2L 1354677 1354697 GGCTGCTCTAATCGTAAACAC 59 1354637 1354655 CTGGTTCTCAAACTCCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4768 FBgn0030790 FBtr0074332 2 1 1 92 X 16686760 16688332 GTACAGAGAACGCTCATCG 58 16688388 16688406 TAGAGTGTTGTCACAGTGC 57 NA Drosophila melanogaster 61 mRpS30 FBgn0030692 FBtr0074094 3 1 1 84 X 15680651 15680834 CGACTACTACAAGCATCTGG 57 15680880 15680899 AATGATCTGCGTTAGGATGC 58 NA Drosophila melanogaster 61 Cyp28c1 FBgn0030339 FBtr0073565 1 1 1 80 X 11734641 11734660 CCATGACCTTCATGTTCGAC 59 11734703 11734775 CTGGATTACGACCAAGCAG 58 NA Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071374,FBtr0071373 2 2 2 98 X 9401287 9404202 TATCCTTCAGTGGCAGTCG 59 9401207 9401225 CATCCATGATGTCCAGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 2 1 1 64 3R 21088560 21088578 GAAAGGATGCAGGGAAAGG 58 21088606 21088683 CTTCTCCTTACCGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10301 FBgn0039106 FBtr0114504 3 1 1 90 3R 19536602 19536735 CAACTATCCGATACGCGTG 58 19536789 19536807 ATTGGTACCGCCATACTCC 59 NA Drosophila melanogaster 61 CG9593 FBgn0038365 FBtr0083178 3 1 1 60 3R 11627925 11628175 TGGCCAACATGAGCTAGTC 59 11628198 11628217 CCTTAGCTTTAGTGCCTGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6830 FBgn0037934 FBtr0082439 2 1 1 91 3R 7508185 7508264 TTCTTGGAGGTCAGCACTG 59 7508112 7508132 GGGATCTGATCCGTATTCTCC 59 NA Drosophila melanogaster 61 CG3680 FBgn0037027 FBtr0078256 3 1 1 80 3L 20805232 20805250 GGAACTGATACAGGGTTCC 57 20805292 20805371 GTGCGTAGATAGCATTTAAGG 57 NA Drosophila melanogaster 61 st FBgn0003515 FBtr0075391 3 1 1 80 3L 16493260 16493338 GCAGAATATAACCTGCTTTCAG 57 16493379 16493397 AAGCTGTACTTGTCCAGGA 58 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 2 5 5 116 3L 11694671 11694689 ACTACATATGCGCCTTCCT 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG42590 FBgn0260967 FBtr0301744 1 1 1 60 3L 8061711 8061732 TTTGGAACAGTTTGTAAGGGAC 59 8061672 8061694 CACATTGTCAGCCAATAGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13287 FBgn0035643 FBtr0077027 1 1 1 60 3L 5875952 5875973 TTTATGATGATCCCAGTGTGGT 59 5875994 5876012 GAAGTTGATGGTGCCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245,FBtr0086246 1 2 2 81 2R 16551359 16551447 GCAATAATGTATCGGTAGATCGC 59 16551300 16551318 AGATTGTGGTTCTCCACCC 59 NA Drosophila melanogaster 61 CG15080 FBgn0034391 FBtr0086613 3 1 1 84 2R 14680353 14680371 CAGAAGAGCTATCTCCGCA 59 14680419 14680494 GATGGGTGATGGGAGACAC 59 NA Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 1 3 3 80 2R 13461764 13461847 AAGAGAACGAGCTTATCTTCC 57 13461887 13461907 TCTTTGAGCACTTGAGAAAGG 58 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 2 3 3 80 2R 12925279 12925354 AATCTTCACGCGCTTATTGAG 59 12925395 12925414 GGAAAGAGCAGAACACAACG 59 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 CG18445 FBgn0033476 FBtr0088434 2 1 1 123 2R 5927001 5927019 TACGACTACGGATCCTACG 57 5926836 5926915 CTTTGGTGAGTTCCTCATCG 58 NA Drosophila melanogaster 61 CG9265 FBgn0032910 FBtr0081507 3 1 1 92 2L 21059604 21059623 CATACGAACATCCGAACCAC 59 21059442 21059549 CAGTGTGGGTACCCATCTG 59 NA Drosophila melanogaster 61 CG10194 FBgn0032790 FBtr0081285 2 1 1 90 2L 19489632 19489712 CTGGATCCATCCCTAGCTC 58 19489560 19489579 TCAATGATTTGCTGTCCCTG 58 NA Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 1 2 2 80 2L 10999568 10999588 CAGGCCATAATGATCATTCCC 59 10999441 10999527 CCTCAACGTCCTAAAGTCAG 58 NA Drosophila melanogaster 61 CG31630 FBgn0051630 FBtr0079400 3 1 1 166 2L 7042483 7046262 TAAACTGAATTGCACTGCTG 57 7046391 7046409 TTTGCTGTACGTACATCGT 57 NA InUTR Drosophila melanogaster 61 ppk7 FBgn0031802 FBtr0079281 1 1 1 81 2L 6353089 6353164 TTCCACCGGGTCAATATCG 59 6352965 6352983 TGGGAGTAGATGAGCAGGT 59 NA Drosophila melanogaster 61 CG4577 FBgn0031306 FBtr0077957 1 1 1 121 2L 1139273 1139291 TACTACAACGTGGGCACTC 59 1139376 1139491 CGTTTAAGTCGCATGTCGT 59 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 1 3 3 60 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823638 823656 ATCAGCCGATCTCTTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3544 FBgn0031279 FBtr0078007 3 1 1 60 2L 785307 785328 AGAATGACTTTCTCATGCTCAG 58 785346 785367 TTCTTTAGAGGCATCACTACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2794 FBgn0031265 FBtr0078067 2 1 1 60 2L 565844 565865 ACTATTACGGAGGCTATAACGG 59 565886 565904 GTGGCTGTTTGGTTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 2 5 5 110 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155897 155915 ATTCTTGTCCCTTACGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 2 3 3 83 2L 215083 215104 GTGATCAATAAACAGACAGGCA 59 214930 215039 GTTCTCCGTAAGCCATTGC 59 NA Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 1 2 2 60 2R 6045279 6045297 GGTGAGGGAACTGGATCTG 59 6045237 6045255 TATGCTGAAGACCTCCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1942 FBgn0033215 FBtr0088928 1 1 1 80 2R 3600484 3600504 TGATGGTAACTTACTTGGCCT 59 3600545 3600622 TTATCATCCAGCCATTGCCA 59 NA Drosophila melanogaster 61 CG31826 FBgn0051826 FBtr0080762 3 1 1 139 2L 15772567 15772587 CACCTTTGGACGATATTTCGT 58 15772389 15772467 TTAGGTCCTCGCATTTCTCC 59 NA InUTR Drosophila melanogaster 61 CG32528 FBgn0052528 FBtr0074793 1 1 1 81 X 19641107 19641292 GTCAACCATACACTCGGCT 59 19641335 19641355 ATATGGCCACAATGTTCTTCG 59 NA Drosophila melanogaster 61 CG17721 FBgn0037885 FBtr0082354 3 1 1 82 3R 7061192 7061210 TCAATTGGCATAACGACCG 58 7061349 7061368 ATCACTCAGTTCATACTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32118 FBgn0052118 FBtr0075889 3 1 1 60 3L 13091550 13091568 TCAATGTTGTGTCGTCAGC 58 13091589 13091610 CCAAAGTTGTTGCAATTCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 2 3 3 88 3L 9888967 9889066 ATTGCTTCGGATCATGGTG 58 9888897 9888915 AAATAGTAGGCGGACCTGG 58 NA Drosophila melanogaster 61 CG2046 FBgn0037378 FBtr0078668 1 1 1 60 3R 1619375 1619393 CCCAACTTTATCGCTGGAG 58 1619269 1619287 GCAATTCCATCTGATCCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074569 2 1 2 69 X 18330825 18331043 CTTTCATCCCAAACTCCCA 57 18330774 18330792 AGTACACGGCAGGATACTG 58 NA DesignRelaxed Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 3 2 2 116 2R 17373768 17373847 TTATTAAGTGCGAGGACTGG 57 17373926 17373944 AAAGATCGAGAAGTGGCAG 57 NA Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 2 2 2 81 2L 10013572 10013644 GCGAAGGAAAGATCACATCC 59 10013510 10013530 CTAATGCATCATCCTTTGCCA 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071352,FBtr0071351,FBtr0114596,FBtr0114594 3 5 5 121 X 8996256 8996535 CAATCATGGTGAACCCGAG 58 8996153 8996171 GCACATGGATGACACTAGC 58 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280,FBtr0074279 2 2 3 88 X 16344524 16345315 CGATAGTAGAGATCGGCCG 59 16345367 16345385 GATCCCGATCCTGGTTACG 59 NA Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0300177,FBtr0070995 3 2 2 60 X 6744658 6744676 GGAGTCCATTGACTTGAGC 58 6744698 6744718 CTGGAAGATCTGATGATTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kl-5 FBgn0001315 FBtr0113891 3 1 1 80 YHet 30453 30525 ATGATTGACCCTCAACTTCAG 58 30564 30585 TTGCGAAAGTCTAAGTACTACC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2179 FBgn0086666 FBtr0091922 2 1 1 60 X 658019 658037 TTTGCGATAAACTGCCAGC 59 657977 657998 TTGTTCCAGAAGTTGTTAACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 2 8 8 97 X 21253984 21254063 ACGATTGTAAAGGCTGCTG 58 21254124 21254142 ATTTCCAGGGTGATACGGG 59 NA Drosophila melanogaster 61 CG33491 FBgn0053491 FBtr0089603 3 1 1 100 X 20073574 20073592 GAGTACAAGGAGCTCTCCG 59 20073406 20073510 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 1 2 2 126 X 19729773 19729791 CTGGTTGATGAGCGAATGG 59 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 CG32551 FBgn0052551 FBtr0290003 2 1 1 60 X 18333009 18333028 GTTCGATCTGGACTACTCCA 58 18333051 18333069 GTCGGGATAGACCAAATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4880 FBgn0030803 FBtr0074342 2 1 1 103 X 16781434 16781664 CACCAATGAGGCAATCGTC 59 16781731 16781749 GTGTATTCACGTTCTCGGG 58 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 3 2 2 81 X 16778986 16779005 AAAGTCCCAAGAGATCCTGC 59 16779047 16779126 TTTATTGTCGTCGATGAGCAG 58 NA Drosophila melanogaster 61 Lsp1alpha FBgn0002562 FBtr0073651 1 1 1 159 X 12384476 12384494 AAGACCCACGACATCAAGG 59 12384617 12384702 GATCGAAGTGCGTGTAGTG 58 NA Drosophila melanogaster 61 nod FBgn0002948 FBtr0073516 1 1 1 80 X 11475064 11475149 CGACGGAAAGTCGTTAATAGTG 59 11475190 11475208 ATCTCATCCTGGCTGATGG 59 NA Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0112974,FBtr0071487 3 2 2 60 X 10102316 10106193 CACAGGACTATTCTTTGGCT 57 10102275 10102293 ATTCCAATCCCGATTCCGA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973,FBtr0071433 3 2 2 84 X 10047907 10047925 AATCGGAAGGATTAGCGGA 58 10048431 10048449 GATACGGAAACAGGCAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300900 1 1 4 95 X 7787510 7787628 TTTATTACACCTATGGGCAGTG 58 7787436 7787454 GTAAATCGATCCGACTGCA 57 NA InUTR Drosophila melanogaster 61 CG10932 FBgn0029969 FBtr0071143 1 1 1 60 X 7781692 7781710 ATGTGGGAGGTCAATGAGG 59 7781650 7781671 CATCCAGTTTCTTGATATTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34338 FBgn0085367 FBtr0112540 1 1 1 80 X 7662365 7662387 GTAATTCGTCAGATATTCTGCCG 59 7662427 7662864 AACAACAGAGCATCTCCGA 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299793,FBtr0299795,FBtr0299794,FBtr0300526,FBtr0299791 3 6 6 80 X 6677562 6677657 CGTCAACGATCTAACGTCG 58 6677500 6677520 GAGCAAACCAACTGATAGACG 59 NA Drosophila melanogaster 61 CG3342 FBgn0029874 FBtr0070918 1 1 1 85 X 6421702 6421794 AAGTTGCGAAGTGAATCGG 58 6421635 6421653 AAGCTGGATGATTCGTTCG 58 NA Drosophila melanogaster 61 CG33668 FBgn0053668 FBtr0302418 1 1 1 80 X 6313337 6313416 GATTCTTGACTACTCCGAAGC 58 6313277 6313296 TTCTTAGAACGGGAAAGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850 1 1 3 109 X 5559650 5559728 GGAATCGGATTGACTTCCA 57 5559436 5559454 ACTTGACGAACTCCATGTG 57 NA InUTR Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 1 3 3 68 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0100272,FBtr0070441 3 2 2 60 X 2498744 2498765 AAGGATTACTTGGTGTTACTGG 58 2498785 2498804 CATCGCCATAGATGAAAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14050 FBgn0040392 FBtr0070407 2 1 1 95 X 2219334 2219437 CTTTCATTACCGAGGACGA 57 2219257 2219277 TGTTCTTGTTATCTACGTCCC 57 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 2 2 2 82 X 1776829 1776848 CAGTTCGTGCATTCGAAGAG 59 1776710 1776788 ATCTTAGATCTCGCCAAGTAGAC 59 NA Drosophila melanogaster 61 Pgam5 FBgn0023517 FBtr0070366 3 1 1 93 X 1767072 1767090 GAAAGTGGTGAACTGTGCC 59 1766931 1767015 AAGGAACTGAGATGCCTCC 59 NA Drosophila melanogaster 61 a6 FBgn0023130 FBtr0070279 1 1 1 142 X 1589684 1589702 GATCTAACTGTACTCGCCG 57 1589495 1589578 TTCTGGTTCATGTCGAGTG 57 NA InUTR Drosophila melanogaster 61 CG13362 FBgn0029531 FBtr0070150 1 1 1 157 X 644738 644814 GACAACAACGGAAACCAGG 59 644599 644617 ATGGATCGTACTGAGCACC 59 NA Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 1 2 2 80 4 1216412 1216481 AGCAATACCATCCGTACGT 58 1216350 1216372 CTACAGTGATACGATACATTCCC 58 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 3 3 3 71 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645220 645238 CCTGGTTACTTCTTAGGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0089082,FBtr0301285,FBtr0089083,FBtr0089084,FBtr0089086 2 6 6 80 4 639091 639169 AAGCTATTATCGGAGGTGGA 58 639209 639230 CAATGTCCTGTACAAAGTTTGG 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 3 9 10 90 4 103292 103311 TTTGTCACAATGCTGATCCG 59 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301248,FBtr0301250,FBtr0301176,FBtr0301249 2 4 4 60 3R 5374718 5374736 GGCCCATGTACGTTAAGTG 58 5374676 5374696 CGAAAGATTCCAGATCAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 3 2 2 80 3R 27611082 27611163 CATACACAGTGTCTGGCCT 59 27611205 27611225 TCGTCTCAACGTTTGTTTGAC 59 NA Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 2 2 2 80 3R 27608525 27608648 TTGAAGATGAAGAGGAACACTG 58 27608684 27608707 CACTAAGGTTGTATAGCACTTGAG 59 NA Drosophila melanogaster 61 pygo FBgn0043900 FBtr0085806 1 1 1 103 3R 27402723 27403033 TTTCACAGAACCTGTGTTGG 58 27402639 27402657 ATATGCTTGGAAGACACGC 58 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597,FBtr0085565 2 2 2 80 3R 25893716 25893734 ATTCCGTTGGGAACTAGCA 59 25893777 25894045 GTCATGCATCTTGTCATCCA 58 NA Drosophila melanogaster 61 CG12413 FBgn0039588 FBtr0085293 1 1 1 151 3R 24369996 24370085 GTCACTGGATGATGTTCAAGAG 59 24369866 24369884 TTGTTTCTTCAGGTGTGGC 58 NA Drosophila melanogaster 61 CG31058 FBgn0051058 FBtr0085198 1 1 1 60 3R 23474484 23474505 AGATTCAGTTTCCAAACAGCAG 59 23474445 23474465 GGCATTGTTCTGATACTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34292 FBgn0085321 FBtr0112488 2 1 1 60 3R 22888158 22888178 TAGACTGCTTGGTCTTCATGG 59 22888198 22888218 CGATCGTACATGATGAAACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlT FBgn0029170 FBtr0085101 3 1 1 147 3R 22874999 22875120 GGATATAGCAACACCGAGGA 59 22875229 22875248 GATGAAGGCTTTCATGGCTG 59 NA InUTR Drosophila melanogaster 61 Lgr3 FBgn0039354 FBtr0084899 3 1 1 85 3R 21501767 21501785 CTGGCTGATATGCTGATGG 58 21501832 21501900 AGCACAACCTTGTAATACTCG 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 3 4 4 96 3R 21448152 21448170 GAGTCTACCAGGGATTCGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 Mocs2 FBgn0039280 FBtr0084782 2 1 1 60 3R 20951585 20951604 AAATAGACTGCTGCAACTGG 58 20951485 20951563 TTCACGTTTGGTGAAGTGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11820 FBgn0039270 FBtr0084765 3 1 1 63 3R 20891644 20891662 ACTTGTGACCAAACAGTCG 58 20891743 20891767 CTCGGCTATAATCTCTTCTATAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Pp1alpha-96A FBgn0003134 FBtr0084642 3 1 1 85 3R 20344838 20344857 TACAAGATCAAGTACGCGGA 59 20344904 20345326 TCATAGAACCCGTAGATGCG 59 NA Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 1 2 2 80 3R 20337251 20337273 CTCTTTACCATGATACTCGTCTC 58 20336935 20337214 CGTAGATGGAGATCTGAAATGG 58 NA Drosophila melanogaster 61 Npc2f FBgn0039154 FBtr0084548 2 1 1 80 3R 19963852 19963872 GATCAAGTCTACCAGAGATGC 58 19963914 19965510 TACAAAGAACCGCAATCCT 57 NA Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483,FBtr0084259 2 2 2 64 3R 18319310 18319328 TTGTGTACGACAGCAAGGA 59 18319356 18319374 CTTGGCCTTTGAGAAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cortactin FBgn0025865 FBtr0084039 2 1 1 96 3R 16889217 16889235 AAATTTGGAGTGCAGTCCG 58 16889048 16889160 TGGAGTAATCCTTCTGAGACTC 58 NA Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 1 1 1 183 3R 14179361 14179436 AAAGGATCAGCCTTGAAGG 57 14179196 14179214 TTAACCACCTCGATGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 repo FBgn0011701 FBtr0083564 2 1 1 124 3R 14063131 14063564 AAGAAGACGAGAACCACCT 58 14063652 14063670 GATTCGCTCAGATTCAGCT 57 NA Drosophila melanogaster 61 CG34279 FBgn0085308 FBtr0112474 3 1 1 80 3R 13228452 13228651 CAAGTACCAGAAGGATTATCGC 59 13228393 13228413 ATGTCCATCCCTAGAAGTTCG 59 NA Drosophila melanogaster 61 CG31498 FBgn0051498 FBtr0083339 3 1 1 60 3R 12490768 12490788 CCCGATAATTATCGATGGGAG 58 12490809 12490828 GGAAATGTTGCACATTTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 2 2 2 80 3R 12187839 12187916 CAATCTCCTAATTGGTCAGCG 59 12187779 12187797 AGAAGATCGGGTCTTGGAG 58 NA Drosophila melanogaster 61 Cad88C FBgn0038247 FBtr0082965 2 1 1 80 3R 10462559 10462636 GCTCATTTACTCAATCTCAACCC 59 10462675 10462694 GATTTCACGATCGAAGGCAG 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 1 2 6 152 3R 8522011 8522183 TAGTCATGCAGGTCCTGTC 58 8522297 8522317 TGAACAGATTGATCATGGTCG 58 NA Drosophila melanogaster 61 CG10005 FBgn0037972 FBtr0082507 1 1 1 108 3R 7802784 7802805 GGGATTAATGAATGGCTTTCTG 57 7802204 7802716 TTGTTCCCAGATTTCTTGGT 57 NA Nonspecific Drosophila melanogaster 61 CG18347 FBgn0260743 FBtr0082484 2 1 1 83 3R 7796686 7796766 GATTGTATCACTAAGACACTGAAGC 60 7796805 7796825 AGGAGCAATCACAATCATTCG 59 NA Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 3 2 2 111 3R 7571164 7571182 TCACCACTACTCACCACTG 58 7571007 7571092 AATAGTTTCCAAAGTAGCTCCC 58 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 2 3 3 125 3R 7504586 7504676 AGAACACTCCCATGCTTACC 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 Cad86C FBgn0261053 FBtr0301933 1 1 1 80 3R 6671486 6671574 TGTTCGCATCAAGCATAACC 59 6671612 6671635 TCGTTGATCAGATTAGTCCTAGAG 59 NA Drosophila melanogaster 61 trbd FBgn0037734 FBtr0082091 3 1 1 102 3R 5533330 5533414 GGGCATGTGTTCTTTACTCG 59 5533247 5533265 GTGTACTCCAGTCCTCCTC 58 NA Drosophila melanogaster 61 CG8358 FBgn0037727 FBtr0082081 1 1 1 80 3R 5502378 5502458 TACATGGCTAACAACTTCAGTG 58 5502499 5502517 CTTTCGCAGACTCTTTCGC 59 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 3 2 2 144 3R 5341245 5341263 AGGAGCTGCGTATCAAGTC 59 5341068 5341137 TTCACCTTATCGATGCGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11755 FBgn0037611 FBtr0081903 3 1 1 60 3R 4504195 4504216 TGCTCTAGGAGTCATATACCCA 59 4504236 4504255 AGGTGGTTGGAAAGGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31454 FBgn0051454 FBtr0081870 2 1 1 118 3R 4347889 4347980 ATGGTCTACATGTTGGCAC 57 4348062 4348080 AAGAGGCTTCCATTTAGCG 57 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 1 3 3 82 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723621 3723639 TACTGGGCTTCGATCATGG 59 NA Drosophila melanogaster 61 dj FBgn0019828 FBtr0089742 1 1 2 86 3R 2885204 2885281 TTTAAGGAAGCCGATGACCT 59 2885330 2885348 TGCAGAACGAATGTGTTGC 59 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081620 2 1 3 150 3R 2589214 2589565 CAACATCCTACCAGACATGG 58 2589678 2589696 GTTGAACTCCACAGAGTCG 58 NA InUTR Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0290296,FBtr0081671 1 2 2 60 3R 2569076 2569097 TGAACACAATACACAGGATCAG 58 2569037 2569055 AGAGCTATTCGAGTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 3 4 4 91 3R 2184950 2184968 TGTCCTCAGCATTTCAGGA 58 2185021 2185112 GAAGGGATGCTTTAGCAAGTC 59 NA Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 3 2 2 195 3R 1561044 1561063 TATCTGGATGAGTTCGACCG 59 1560807 1560886 ACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 CG12171 FBgn0037354 FBtr0078708 3 1 1 60 3R 1459690 1459708 GGAATCTTGGAGCTAGGCA 59 1459732 1459750 TCATAACGCGGTCAAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hus1-like FBgn0026417 FBtr0078876 2 1 1 63 3R 634985 637713 GGTTGAAAGTTCTTTGCTGAC 58 634942 634960 TCATGTACAGCGGATCCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Mur82C FBgn0037260 FBtr0078930 1 1 1 60 3R 367724 367748 CGGATGGAAATTCAGATCTATTAGC 59 367763 367784 GACGTTGTTATCGGATAAGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14651 FBgn0037254 FBtr0299947 1 1 1 60 3R 309481 309502 CCAGTTTACAACAGCATTAAGG 58 309521 309541 CTTGCCAGTGAATGTACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1074 FBgn0037250 FBtr0078925 2 1 1 80 3R 261159 261239 CATAATAACAGATCCTCCCTATGGA 59 261277 261295 CTAGTGTTGGCCTTTACGC 58 NA Drosophila melanogaster 61 snoRNA:Me28S-A30 FBgn0086081 FBtr0114357 2 1 1 60 3L 17996118 17996138 GGTGTTATTGGGACTTACCTG 58 17996078 17996097 TTTCTCAGACAGTTTCCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ssl1 FBgn0037202 FBtr0078554 1 1 1 101 3L 22872484 22872502 GAGGACCAGAAGGAGTACC 58 22872620 22872638 GATCTCTGCAATGGCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 jim FBgn0027339 FBtr0078581 1 1 3 103 3L 22789579 22790217 GGCAAATTTCGCAAATTCGA 58 22789495 22789518 GTATAAGTTGGAGGATTGATACGC 59 NA InUTR Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 2 5 5 85 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776575 22776594 GGTGCTCGTTCATTTGATCC 59 NA Drosophila melanogaster 61 l(3)04053 FBgn0010830 FBtr0078535 2 1 1 95 3L 22732552 22732763 AACTAGAGGCGGAACTTCG 59 22732475 22732494 CACTGTCTCTACCAGGTGTC 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914,FBtr0078496 3 2 2 85 3L 22272068 22272086 TTTGACAACCGGTTTCGAG 58 22272133 22272216 TTCTCATCTTTGAGATCCCGG 59 NA Drosophila melanogaster 61 DNApol-alpha60 FBgn0259676 FBtr0078241 2 1 1 60 3L 20353452 20353470 ATTATCAAGGATGTGGCGG 57 20353410 20353432 GATCCATGTTCTTATACGGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074854 2 1 3 107 3L 20213226 20213249 CTGTCTATCAAGTGAATTTGTCCC 59 20212745 20213165 CAGATCCTCATATTGATTGCTGAG 59 NA InUTR Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 2 2 2 80 3L 19603759 19603777 TTAGGAGCATCCCTTTCCG 59 19603639 19603719 TTGTAGACGTTCTGGGATATCTG 59 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0302510 2 1 3 80 3L 17467925 17468031 TACGGCAAAGGTTCAAGTC 58 17468074 17468093 CTTGGACAGAAGCTAAGTGC 59 NA InUTR Drosophila melanogaster 61 frc FBgn0042641 FBtr0299820 1 1 2 82 3L 17423270 17423288 CGAGATATCGCCCTTCCAG 59 17423149 17423225 TCATGTCATGACGTCTTGGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34248 FBgn0085277 FBtr0112442 1 1 1 246 3L 16263854 16263872 ATTTCAGGTGGTGCTCCTC 59 16263626 16263644 AATGGAGTTGCTGTAGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075450,FBtr0075449,FBtr0075451,FBtr0075448,FBtr0114589 1 6 6 125 3L 16111388 16111406 CACCACGATATCGAAGCAG 58 16111495 16111620 ATTTGCACAATGTTCGCCT 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 2 2 7 103 3L 16068850 16069333 GTCGGAGTTCTTATGGCAG 58 16069400 16069418 ATATCGATCGCTTGTGGAG 57 NA Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075648 3 1 2 278 3L 15135464 15135482 AGTTGAGGAGGGTGTTCTG 59 15132429 15132447 CTGTACTCCACTGGAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075754 1 1 2 88 3L 13872157 13872175 TTAACACCGATTTGTGCGG 59 13875770 13875788 GCAACTGTTTGATCTCCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 2 3 3 80 3L 12468728 12468750 GAGAGTGATGAAGAGCTATACAC 58 12468612 12468690 TTGGGTAACCTTAACAATGCC 58 NA Drosophila melanogaster 61 Ir68b FBgn0036250 FBtr0076026 3 1 1 60 3L 12118838 12118858 GTCAAATGGATCTGATCACCC 58 12118798 12118816 TCCTCGAGAAACTCCTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076459 3 1 5 63 3L 9423883 9423901 AACTACAGCATCTACGGCA 58 9423928 9427505 CATCCGAACTCTGTTGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3982 FBgn0035988 FBtr0076485 2 1 1 100 3L 9409433 9409452 AACCAGATGCACAAATGCAG 59 9409285 9409374 CTGAGAGGGATATCCATTCAGAG 59 NA Drosophila melanogaster 61 CG32351 FBgn0052351 FBtr0076639 3 1 1 85 3L 8614289 8614364 GGTTACCGGTCAATATTCGTG 59 8614411 8614429 TTTCACCATGTCTCCAGGA 58 NA Drosophila melanogaster 61 CG7207 FBgn0027569 FBtr0076717 3 1 1 81 3L 8282319 8282340 ACTATAAATCCGAATCGGAGTC 57 8281310 8282277 GACTCATGGGCCTTAATGG 58 NA Drosophila melanogaster 61 CG13681 FBgn0035832 FBtr0076679 2 1 1 61 3L 8064934 8064952 AATCTCACCACGCTGAGAG 59 8064975 8064995 TCCAGGCGCATATTTATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32372 FBgn0052372 FBtr0076793 3 1 1 84 3L 7518780 7518800 ATATCGAGTGAACTCGTCACC 59 7518840 7519203 TGGGATTGTCATCTAGATGTATCTC 59 NA Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870,FBtr0076871 2 2 2 80 3L 7368212 7368296 CTCTAGCAAATAACAGGGCTC 58 7368152 7368172 TCTCGAAGTAGCTAAACATGG 57 NA Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870,FBtr0076871 1 2 2 80 3L 7368206 7368290 CAAATAACAGGGCTCTCATGC 59 7368146 7368164 CACTGCTCTCGAAGTAGCT 59 NA Drosophila melanogaster 61 Or65c FBgn0041623 FBtr0077006 1 1 1 80 3L 6320760 6320779 GGAAGCACTTTCGAGATCCT 59 6320819 6320896 AGAACATTGCTTTCATCTGCTC 59 NA Drosophila melanogaster 61 CG10289 FBgn0035688 FBtr0077019 1 1 1 80 3L 6165302 6165320 CTGTGATCACTGTGATGGC 58 6165185 6165258 TTTCTAGTGTGGGTTTCGC 58 NA Drosophila melanogaster 61 CG10472 FBgn0035670 FBtr0077066 2 1 1 100 3L 6055604 6055622 GAATGTGATCGTGCACGAG 59 6055461 6055543 GCTGGATGTACTTGTTGAACTC 59 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077075 1 1 3 136 3L 5925731 5925749 AAGCGACCCTGAAATTGGA 59 5925553 5925631 TAGATGGTGTTGCTGGGTC 59 NA InUTR Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 2 4 4 80 3L 4580096 4580114 CTGCATTGACTCCTATGCC 58 4580155 4586596 CTATCCTTTGTGAGAACCTCCT 59 NA Drosophila melanogaster 61 RfC4 FBgn0260985 FBtr0073264 2 1 1 131 3L 4135756 4135827 ATTATTGCTGGTCCTCCTGG 59 4135644 4135662 GACCACATCGATTCCTCGT 59 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 3 2 2 93 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504797 3504902 AATATCAATGGGTAGCGATGAC 58 NA Drosophila melanogaster 61 CG12014 FBgn0035445 FBtr0073077 3 1 1 87 3L 3379723 3379742 GGGCTATAGTCTCAGAACCG 59 3379792 3379877 CACATCGTGCCAATCTCTG 59 NA Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 1 2 2 89 3L 3372838 3372977 CGAGAGTGGTAAATTTGCAGG 59 3372769 3372787 ATACTAGGCGGCAATACCC 59 NA Drosophila melanogaster 61 CG34025 FBgn0054025 FBtr0290083 1 1 1 80 3L 2960643 2960663 ATCTGAGGTATTGCCTTGGAG 59 2960523 2960603 CACTCAAATAGTCACGAGAGC 58 NA Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 2 2 2 121 3L 2373059 2373138 TGTAACATTGCCCAGGGAG 59 2372956 2372974 CCAGAAATCTGCGGAAACC 59 NA Drosophila melanogaster 61 5SrRNA:CR33387 FBgn0053387 FBtr0086379 1 1 1 60 2R 15641157 15641175 ATACATCGGTTCTCGTCCG 59 15641115 15641133 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33406 FBgn0053406 FBtr0086398 1 1 1 60 2R 15634173 15634191 ATACATCGGTTCTCGTCCG 59 15634131 15634149 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33413 FBgn0053413 FBtr0086405 1 1 1 60 2R 15631594 15631612 ATACATCGGTTCTCGTCCG 59 15631552 15631570 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33680 FBgn0053680 FBtr0091660 1 1 1 100 2R 21137247 21137265 CCATTAGAACCGTTGTCCT 57 21137104 21137183 CCTGTATAGTTCCCTCCGT 57 NA Drosophila melanogaster 61 CG4681 FBgn0069913 FBtr0301624 1 1 1 71 2R 20466566 20466584 CTGAAGAAGCAGGTCACCA 59 20466429 20466447 ATCCTCTTCCAGAATGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 px FBgn0003175 FBtr0071838,FBtr0112820 2 2 3 80 2R 18424399 18424417 CAAGGATTACTTGGCCAGC 58 18424273 18424359 GAGGGAATGTTGTATCTTCTGTG 59 NA Drosophila melanogaster 61 CG13500 FBgn0034683 FBtr0071805 1 1 1 60 2R 17944153 17944171 GTCAGAGCGTAAGGAGGAG 59 17944111 17944130 GGAGTAACCAATCCAAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 2 2 2 103 2R 16495332 16495410 ATCACGCATCAGGATCCTC 59 16495247 16495265 CCATTCTTATGCAGCGTGG 59 NA Drosophila melanogaster 61 CG30151 FBgn0050151 FBtr0086269 3 1 1 60 2R 16416744 16416762 ATCTCTGGAGTGGATACGG 58 16416702 16416723 CATTTACTGATCCGTAGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 2 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587567 14587587 TGTTTGATAGTGTATCGCCGA 59 NA Drosophila melanogaster 61 CG14490 FBgn0034281 FBtr0086801 1 1 1 152 2R 13748589 13748608 TACTTTGGTCAGTGGCTAGC 59 13748844 13748862 AAATTGACCCACGTAGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 3 2 2 90 2R 13424076 13424210 GTGATGAAGATCTGCTGGG 58 13424262 13424282 TTTGGGATATTGTCCACTACC 57 NA Drosophila melanogaster 61 CG34189 FBgn0085218 FBtr0112382 1 1 1 60 2R 12642297 12642316 AATCTGCAACTATGCATCCT 57 12642336 12642357 CAACAACCAGTTGCTTTATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15925 FBgn0034129 FBtr0087159 3 1 1 60 2R 12334723 12334743 AAAGATACCACAAGAAGGCCA 59 12334764 12334783 GCCATCGATGAAACGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302789,FBtr0302790,FBtr0302791 3 6 13 100 2R 11842269 11842346 GAGACATGGCAACATCGAG 58 11842187 11842205 CCTCAACGTGACATTCCAG 58 NA Drosophila melanogaster 61 CG10131 FBgn0033949 FBtr0087499 1 1 1 115 2R 10517731 10517749 GTACTCGCAGTTGGATGAG 58 10517827 10517902 CCACTAGCATCTGTTGTCTC 58 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087610,FBtr0114493 2 2 5 171 2R 9847610 9847837 GTAACACTGCTGAGCTCTC 58 9847457 9847475 CTCTGGGTCATGTAGACCA 58 NA InUTR Drosophila melanogaster 61 CG30056 FBgn0050056 FBtr0087823 2 1 1 72 2R 8449806 8449824 AGCTCCTTCTAATGGCCTC 58 8449860 8449878 ATCAGGATCTCGTCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 2 3 3 98 2R 7469203 7469221 GACAAGTTGCTACTGTGCG 59 7468894 7469141 GTAGCAGTACCAATCGCCA 59 NA Drosophila melanogaster 61 etaTry FBgn0011554 FBtr0088163 3 1 1 60 2R 7228430 7228450 GTTATACCAAAGAGAACGGCT 58 7228390 7228410 ACAATTGGTACCTTAACCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prx2540-1 FBgn0033520 FBtr0088261 3 1 1 103 2R 6312548 6312631 CAACGTTGACGAGATTCTGAG 59 6312759 6312777 TCATGACCTTAGTGCCAGG 59 NA Nonspecific Drosophila melanogaster 61 Prx2540-1 FBgn0033520 FBtr0088261 2 1 1 71 2R 6312494 6312512 CAGTCCGGACCATAAGGTG 59 6312547 6312628 AGAATCTCGTCAACGTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12909 FBgn0033507 FBtr0088348 2 1 1 60 2R 6197983 6198002 AGTTGGATGGACATCATTCG 58 6198022 6198043 CGGCTGGAGTTAAATTGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402,FBtr0113062 3 5 5 156 2R 5949890 5949908 ACATCGGTGAAGAACAAGC 58 5950028 5950221 TAGAATTCGAACCGGTGGT 58 NA Drosophila melanogaster 61 CG10459 FBgn0033440 FBtr0088468 2 1 1 60 2R 5595783 5595803 CAACAAGGGAATCTACGTGTG 59 5595822 5595843 GTCGTAGTCGTATTTGAAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4p3 FBgn0033397 FBtr0088593 3 1 1 95 2R 5129977 5129995 ATGGACAGAATCCGGAGAG 58 5130052 5130154 AAACACCAGAGTGATCTTTGC 59 NA Drosophila melanogaster 61 Mlh1 FBgn0011659 FBtr0088790 1 1 1 97 2R 4058583 4058601 GTTCATCAACCAGCGACTG 59 4058719 4058737 ATACGAAAGGATGGTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 cn FBgn0000337 FBtr0088931 2 1 1 89 2R 3672004 3672436 TATTGGAGCAGGACTTGTGG 59 3671934 3671952 ATATCCTCCCGGTACTCGT 59 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837,FBtr0112838,FBtr0088938 2 3 3 80 2R 3596043 3596061 CCACCTACATAATCCGGGT 58 3595829 3596002 TGAGAAAGTTGTCATCAGACAG 58 NA Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 1 1 1 60 2R 3379385 3379467 GGATGTGAATTTGCCAGCC 59 3379343 3379361 AAAGTTGTCCCTCAGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34215 FBgn0085244 FBtr0112408 1 1 1 80 2R 2718992 2719065 AAATCCAATCATGTGGTGCC 59 2718931 2718949 CAGGGTAATCTGCGTTTGG 58 NA Drosophila melanogaster 61 CG1298 FBgn0033032 FBtr0086037 2 1 1 60 2R 1559629 1559650 CTACGCTATGCTTTGTAATGTG 58 1559671 1559689 GTGCGAAGAAATGCTACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-640b FBgn0083025 FBtr0113543 2 1 1 81 2L 20419039 20419058 TTCGTGTCTACAATGCTCCA 60 20419102 20419120 TTGGCAACCATCTTAGGCA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33838 FBgn0053838 FBtr0091842 1 1 1 60 2L 21493701 21493723 CTAGAATTATTCCGCGTCATCTG 59 21493742 21493761 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33837 FBgn0053837 FBtr0091841 1 1 1 60 2L 21491756 21491775 AGTTGAGAAGAAAGTGGTCC 57 21491798 21491816 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33887 FBgn0053887 FBtr0091891 1 1 1 60 2L 21489378 21489396 CGTAATTCGTGATGCCGTG 59 21489336 21489355 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089945,FBtr0089946 2 3 3 99 2L 20790462 20790480 ATACCATCCCAAGAGCTGG 58 20790326 20790400 GCTTCGAGATTCTTGTTCCG 59 NA Drosophila melanogaster 61 CG7200 FBgn0032671 FBtr0081062 1 1 1 80 2L 18157966 18157984 ACGAACAACTGATTCAGCA 57 18157850 18157923 CATGATAGGAGGTCCATGAG 57 NA Drosophila melanogaster 61 CG33928 FBgn0053928 FBtr0091932 3 1 1 125 2L 17436473 17436545 TGCATTTGGTGGAAAGTAGTC 58 17436368 17436389 CCGATAGGTATTTGTAAGTGCG 59 NA Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0302189 1 1 2 80 2L 16876189 16876209 TTGCCACTTTCAGTCATTTCG 59 16876248 16877515 TCCTTTAGGATGTCAGCTTCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31739 FBgn0051739 FBtr0080919 3 1 1 81 2L 16827880 16828060 CCTTTCAACATGGGTGGTC 58 16828104 16828123 TCATATTGAAGTTGCTGGCC 58 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300003 3 1 4 220 2L 16559933 16652749 AAGTTTATCGAGGTCCCGC 59 16657519 16657537 CACCGGAGTGTAGAAATGC 58 NA DesignRelaxed Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080777,FBtr0080775 1 5 5 84 2L 15729490 15729574 ATTTAGTCGGGAGATGGCT 58 15729424 15729442 GAAGAATGGCTCCATCCAG 58 NA Drosophila melanogaster 61 CG18478 FBgn0028517 FBtr0080757 1 1 1 91 2L 15670248 15670269 GCTTGGACACTAATAGTAGCAC 59 15670320 15670439 CCATATCCGCACTTTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG42448 FBgn0259922 FBtr0300217 3 1 1 82 2L 15547596 15547671 CCTTTCTCCAGGACAATAGAC 57 15547714 15547733 TGTTTGAACTAGAGTGCTGC 58 NA Drosophila melanogaster 61 CG33678 FBgn0053678 FBtr0091658 2 1 1 72 2L 15070078 15070096 AACATAGGAGCGATCCAGG 59 15070458 15070476 GCCAATGATGGTATGGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477 1 1 2 112 2L 13306159 13306177 TTGGGAGAATTTACCGCCA 59 13305829 13306086 TATGGATTTCAACGTCATTGGC 59 NA Drosophila melanogaster 61 CG16978 FBgn0040972 FBtr0080495 3 1 1 112 2L 13144458 13144479 AATGAGCGACATATTTGCAGAC 59 13143759 13143777 GTTGGGCGGTACTAGAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9928 FBgn0032472 FBtr0080496 2 1 1 60 2L 13142692 13142713 TTCTGATGACGATAGGACTCTG 59 13142653 13142674 TCTATCATTGCCACTGTTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 3 2 2 87 2L 12060457 12060475 TATCTCCCACGATGAGGCT 59 12060329 12060409 GAGAGGCTTACTTAGTATGGCT 59 NA Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 1 1 1 61 2L 11936908 11937110 AAATAGTGGAATTACTGCGCAG 59 11937131 11937150 ACTTGAAATAAACTGGCCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 2 4 4 80 2L 9517894 9518002 AGCTCATAAGGTTAACAGCAC 58 9518041 9518062 TGTCATTCTCCATATCAGTCAG 57 NA Drosophila melanogaster 61 PrBP FBgn0032059 FBtr0079750 3 1 1 60 2L 8685390 8685409 CCAGTTTCTACGACAACGAG 58 8685349 8685368 TAAATGTAGTACAGGCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 1 6 6 80 2L 8261678 8261754 GCTGCATACCAAAGTTCCA 58 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0302595,FBtr0079641 1 2 2 80 2L 8136757 8136776 TGGACACAAAGTTCATCTGG 58 8136623 8136716 TGGAATCGTCAAGATTTAGGC 58 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 3 4 4 81 2L 7727745 7727837 CTGTGTCTGTTTCAACTAACCT 58 7727685 7727703 GAATCAAGCCCTGACTCAC 58 NA Drosophila melanogaster 61 CG4567 FBgn0243517 FBtr0079413 1 1 1 81 2L 7221186 7221205 GGAATTCGTGGACGAAACAG 59 7221071 7221143 AGCCATTTCTCTGTAACCCT 58 NA Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0079414 1 1 2 87 2L 7218847 7218925 CTGAGAATACTCTTCTGATACTGG 58 7218783 7218802 ATTAGTTTCGTACGGATGCT 57 NA InUTR Drosophila melanogaster 61 CG17375 FBgn0031861 FBtr0300821 1 1 1 80 2L 6805289 6805310 GAAGATGAAACGCAAATAAGGG 58 6805164 6805248 AGAGGGAAAGAAGACCCAG 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 1 3 6 80 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688667 6688685 GAGGATCTGTCTAGGCAGC 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0114488,FBtr0079312,FBtr0079314 2 5 6 94 2L 6701750 6701768 TCACTCTCACTCGATCCAG 58 6700488 6700562 CGACGAGGTCTAATGTGTC 57 NA Drosophila melanogaster 61 CG13993 FBgn0031776 FBtr0079191 3 1 1 94 2L 6069479 6069568 GACGACACAAGAGTTTACCAG 59 6069624 6069642 CATTTCTCCTGCCTAGCCT 59 NA Drosophila melanogaster 61 CG15423 FBgn0031580 FBtr0077506 1 1 1 60 2L 4006164 4006183 GGAAGGCCAATTGTAGAGGT 60 4006206 4006224 TCTCAATCACTGGTCGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 1 2 2 80 2L 3463758 3463777 GCCGCTAAATAATTTGCAGC 58 3463645 3463717 ATATTGAAGCCCTGGTACTCG 59 NA Drosophila melanogaster 61 Tfb4 FBgn0031309 FBtr0077985 3 1 1 84 2L 1150317 1150387 CCATGCCACAAACTTCCTG 59 1150251 1150271 CAGATTAAACGCCTCGTACTG 59 NA Drosophila melanogaster 61 kraken FBgn0020545 FBtr0078016 2 1 1 68 2L 852997 853201 CAGAGACAAATGGCCAGAC 58 853233 853251 TAGAGAACTCCTCCCAGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 1 4 5 96 2L 344409 344427 GAAATCCAGTCCGCTAGAG 57 344484 344570 CGGAGAAAGACAATTAAGACTC 57 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 2 6 6 127 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499926 1499944 CTGATTCGCATCCACTTGG 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 1 5 6 195 2L 1726645 1727653 AGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA InUTR Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 1 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938580 TTGATCCATCCAAGTTGGC 58 NA Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 2 1 1 73 2L 2652123 2652141 TCCGTTTGCAATGGAAAGC 59 2652008 2652027 AATGACATCACACTCTCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 3 9 10 125 2L 3502123 3502430 CTGCTTTCCAATGCGAAGG 59 3502016 3502037 ATCGTAGGTGAGAATAGTGTCG 59 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0077481 1 1 6 111 2L 4190814 4193317 GTTAAGAGGAGTGGCTTGC 58 4190721 4190740 AGGAAAGATAGGCCAGATCC 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0077481 3 1 6 114 2L 4190818 4193321 CGATGTTAAGAGGAGTGGC 58 4190722 4190740 GGAAAGATAGGCCAGATCC 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 1 5 6 80 2L 4192682 4192703 ACCTTAAAGACAACAACCACAG 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 2 1 1 62 2L 4408585 4408605 TGAATCGTGGATATCGATGTG 58 4408474 4408492 TATAGCCCACTGGAACACC 58 NA DesignNoJunction Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 1 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 3 4 4 214 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221194 5221212 CACGATCAGCATAAACACG 57 NA DesignRelaxed Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 3 3 3 80 2L 5347217 5348443 CGTTCACGACATGAATACCG 59 5348485 5348504 ATCATGCGATCCATTATGGC 58 NA Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 1 1 1 94 2L 6264417 6264435 TTGATTCTCCTCGCCACTC 59 6264284 6264302 GGAACGATCTTGGAGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 1 2 3 104 2L 7041152 7051378 CTATTTCCTTCTATGCGGCA 57 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079461 1 1 5 111 2L 7456823 7456841 AATTGTGGCGTTCTACGTG 58 7455753 7456752 CTTCAACACCTGATTCAGTACAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 3 6 6 86 2L 8262337 8262357 CAACGGAACTCTATTGGATGC 59 8262206 8262289 AAGTGGGAGTTGTCCTTGG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 2 3 6 85 2L 8284180 8284199 ATTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 2 1 1 114 2L 8308547 8308565 AGCGATGTGCTAAAGAGCT 59 8308715 8308733 CTTCGGCATTACCCAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 2 3 3 81 2L 8564224 8564243 CTTACAGTCCTCGTGATTGG 58 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 1 3 3 117 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045 2 1 2 183 2L 8992481 8992698 CTATTAACAGGCTCCTGGC 57 8992902 8992920 GAAGACCAGGCAAATGGAG 58 NA InUTR Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079912,FBtr0079915 2 2 6 80 2L 9815908 9825311 GCGTGGTTAAATTTGGAGTG 58 9815847 9815866 GATTCGTAGATCCTTGACCC 57 NA Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 2 1 1 60 2L 10191241 10191259 GGAGTTGAGGAACGAATGC 58 10191145 10191165 CTGATTTCTTCACTATGCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 2 3 4 91 2L 10248581 10248601 ACGACAGAATGTCCTATTTGC 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 3 3 3 80 2L 10275742 10275761 TTCCTAGCATATCGCAACTC 57 10275614 10275699 TTGCTGATATAAGACGCCG 57 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 3 5 5 81 2L 10296850 10296948 CGTTTCTAAAGCTAAGCTCGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 2 3 3 80 2L 10465371 10465951 CCAATATAGTTCACAGACACGA 58 10465312 10465332 CAACTACAATGTCCTCATCCA 57 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 3 2 2 82 2L 11003232 11003524 GAACATGATCAAGGGAGTCAC 58 11003170 11003188 AGGTGACACAGTTGATGGG 59 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0080196 1 1 2 93 2L 11092644 11092663 ACCCTATTTGTTCCTTCGTG 57 11092716 11092792 GTGACCAGTTCTATTTCATTGG 57 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0301171 2 1 3 104 2L 11987773 11987791 ACAAGAAGCACAAGGAGCA 59 11987486 11987705 GCGGGATACTATCCGAGTC 59 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 2 3 3 81 2L 12037204 12037222 AACTTTCCATCTGCTGTGC 58 12037051 12037161 GGGATCAGCATAGTCATTAGC 58 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 2 3 3 81 2L 12037204 12037222 AACTTTCCATCTGCTGTGC 58 12037051 12037161 GGGATCAGCATAGTCATTAGC 58 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080344,FBtr0080346,FBtr0300567 1 4 5 80 2L 12278910 12282524 GCTAAATGGGATGTACCATCC 58 12298570 12298589 ATACCCACAAAGAGTTTGCG 58 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 1 2 2 60 2L 12693379 12693397 CTCCCATCCAAACATGGTC 58 12693483 12693502 GGCATCATCAAAGGTCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 2 2 2 99 2L 13164197 13164327 CCCTTCGATACGACCTGTC 59 13164116 13164135 TCTGCTCTACGAAACCACTG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 2 3 9 80 2L 13274314 13274337 GTATCATACCGATAACTCTAGAGC 58 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0080610 2 1 2 97 2L 13990982 13991002 CCAAATTGAAACGATTGAGCC 58 13990580 13990923 ATTCAGCTGTAGGCTGGTC 59 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496 3 2 4 103 2L 14601207 14601226 CTATCGAGATCTCGATGGGC 59 14600867 14601141 CCTTCAGACCTTGGTAGCT 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 1 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 1 4 4 80 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065387 15065405 TCAATAGCCTCCTTGACCG 59 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 2 3 3 91 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451922 16452206 GCATCATAGTACCAGCTGG 57 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941 2 1 3 81 2L 16727059 16727077 ATGAGACCATGCCCAAGTC 59 16726100 16727017 AGATATGCTAAACCATTGCTGG 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 1 3 4 80 2L 17417623 17417641 GCTGAAACTAGTGAGACCC 57 17415379 17417580 GTTAGGAGTTCTGGATTCGG 57 NA Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 3 2 2 80 2L 18010978 18010999 AATGAGTATTACGGAGACTCGG 59 18010851 18010938 GCTGGAATACTCCAACAGGA 59 NA Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 3 1 1 90 2L 18956473 18956494 AGTCACCGAATTAGTACTGGAC 59 18956298 18956316 TTCTCCACTAGCCATGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 1 3 3 105 2L 18963249 18963267 AATCCGTTCGAAGAGGAGC 59 18963107 18963181 CTGTGATGCTTCCTTGACTG 59 NA Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 2 2 2 125 2L 19047032 19047155 CCTATTCCACTGAAGACGAG 57 19047241 19047261 GTATTGCCCGATCCATATCAG 58 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 1 4 4 80 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391897 19391915 CTTGTCAGCTCTTCAGTGG 58 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081208 1 1 3 190 2L 19437838 19440674 ATTCCCACTTGGAGTACCC 58 19437666 19437684 CTTCTAGAAGACGGGCCAG 59 NA Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 2 2 2 80 2L 19729961 19729979 TACTGGACGTCTTCCAGAC 58 19730021 19730109 AGAAGTGGTATTGATCCTCGG 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 1 5 5 82 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 1 2 2 133 2L 20660380 20660461 TTCTTCGATGTGGACACCC 59 20660265 20660283 AAATCCGGCGTATAGGTGG 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 1 2 2 65 2L 20766018 20766036 CAGACAACAAGTGGACGTG 59 20766142 20766160 CTGAGGTCCTTGTACAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826077 20826641 CACTTGTCATTGTCGATGGT 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 3 9 9 90 2L 20877211 20877229 CGCTTTGATCAAGTTCTGC 57 20877074 20877157 ATACTGGGTACTCAGTCCC 57 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 1 4 9 127 2L 20876951 20876969 CACTAGTCAGTCGCAGGTC 59 20874420 20875087 ACAGCGTGAACAGAAATTGTC 59 NA Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 2 2 2 80 2L 21079112 21079302 TGCATTATAGATCTCAGGAGGAC 59 21079341 21079360 GAACCAACTTATGGAAGCCG 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081511 1 1 4 90 2L 21297160 21297178 ATGTTACGCACTAATGGCA 57 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 3 2 5 99 2L 21618104 21618507 TTCAATAGCAATGCCACCC 58 21618023 21618041 AACTCTCCGGAGTAACCAC 58 NA Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897 3 1 2 81 2L 21640998 21641077 CTATTGTCCATTGCAGCTCTG 59 21641117 21641138 GTTCGAAATCATCCTCTAGAGC 58 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 1 3 3 94 2L 22959943 22959962 AATCATTCACGAATCGTTCG 57 22959807 22959888 CCACTACAGCTTTAATTGCAC 57 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 3 3 3 103 2R 979973 980042 CGTATTCAGACCAAACCTGG 58 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 1 3 4 95 2R 1414860 1414878 ACATCCTAATGGCTACGCA 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 3 2 2 88 2R 1952496 1952515 AAGTCCTACCCTGTGTTCAC 59 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0086012,FBtr0086008,FBtr0086010,FBtr0302439,FBtr0086009 2 6 6 80 2R 1981650 1982072 CCACTATTCCGCTACTACCT 58 1981589 1981610 CCAACTGATTGTACGTTAAGGA 58 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 2 4 5 82 2R 2503183 2503201 GGAGCTGGAAGCTATCTCC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111077 1 1 59 80 2R 3246431 3249237 GATTGGTCATCACAGAACCC 58 3246370 3246390 GCTCTACGTCTATGAACTGGT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 3 2 59 82 2R 3247642 3247660 ATTCTCCGGGTGTATCTGG 58 3236472 3247599 TTGTACCATCTAAAGAAGGGCA 59 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088957 1 1 3 91 2R 3415471 3416543 AGTTCAATGAGTGGAACAACAG 59 3415401 3415419 TTATGGTGATCGGGATCCG 59 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 3 2 3 119 2R 3593013 3593031 TAAACACAGACTTGGTGGC 58 3592854 3592932 TCCACTTTACTGTTTAGACCG 57 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 2 3 3 116 2R 3690701 3691031 ATATTTCCGAGACTTCATCGC 58 3690605 3690623 CCATCACATTGTCCAGCAC 59 NA Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 1 2 2 82 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720262 3720280 GTCCGGATCACTCCTATGG 59 NA Nonspecific Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 3 4 5 95 2R 4788973 4788991 TTTAGCCCGTAGAGTTCGA 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 babo FBgn0011300 FBtr0088659 2 1 3 82 2R 4843297 4843318 AGGATTGATTGCTGTAAGAGTG 58 4843361 4846627 CGGTGTGGCACATAATCTG 59 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301193 3 2 3 89 2R 4898797 4898815 GATCTGGTCTTGTTGCGTG 59 4896714 4898746 AAGTGTATTATGTCGCTCGTG 58 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512 1 1 3 91 2R 5074631 5075634 AGACTTGGAGGTTTGAGGG 59 5074558 5074576 CAGAAAGGTGACCATGCAG 58 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 3 2 2 116 2R 5095794 5095812 GTTTGTGACCTTCGAGGAC 58 5095964 5095982 GCCAGGTACAGATAAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 3 2 2 116 2R 5095794 5095812 GTTTGTGACCTTCGAGGAC 58 5095964 5095982 GCCAGGTACAGATAAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 3 2 4 144 2R 5119290 5119308 GTCACGTAAACCGGATACC 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 3 1 1 66 2R 5283258 5283276 TAAGCAGATATCCGGGCTG 59 5283156 5283174 TAGGTTGTAGCTGAGCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 3 2 2 82 2R 5320556 5320643 TCATCTATCTAAAGGCTCTGTCC 59 5320685 5320703 GGCGCGATAGAACTTTGAG 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 2 3 3 102 2R 5475201 5475289 AAGGGTATCAGGTCCACTC 58 5475352 5475373 CATAGGTCACGTAAGTGTACAG 58 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299930 2 1 2 85 2R 5605398 5606568 CTCCTCCAGAGTTTGTTCG 57 5605331 5605352 CCGGAAGATCTTCAATATCTCC 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0088450 2 1 2 82 2R 5778795 5778813 CGAATGTGATGAAGGGCTG 59 5777232 5778752 ATCCTTCGACGTGTAATAGGAC 59 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 3 2 4 113 2R 5782187 5782265 CCGAAGAGAAACCAATAGCTG 59 5782339 5782358 ACAGCTCTAAGGATACAGGG 58 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088445 1 2 5 117 2R 5807023 5807041 GATCTTACGGCGACAACCT 59 5806558 5806948 GATGGATAAATTATCAGGGACATCC 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 2 4 5 83 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949139 ATTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993884 5993903 TGGCCCTTAACTTCTCAGTC 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0300578 2 1 2 118 2R 6604804 6604823 TAAATGGAGGATCCCGACAC 59 6604904 6607313 ATATTCCGCCTCTGAGTCG 59 NA Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 3 2 2 110 2R 7327828 7328587 CGGTTAAGATTCTCATCGATCAG 59 7328657 7328675 GGAGTCCCAGGAAGAACTC 59 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071 2 1 2 84 2R 7758831 7758924 TAAGCTACTATGCCTCGCC 59 7758765 7758784 CTTACTACCGATCTCCACGA 58 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 1 1 1 60 2R 8433560 8433581 TCTTGTCCTTACAACGTAAGTG 58 8433654 8433675 TCAAGACAAAGTCCTTTACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 2 3 3 92 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527568 TGCGGAGAAGCTCTTATAGC 59 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 1 3 3 91 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527567 GCGGAGAAGCTCTTATAGC 57 NA Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087844 2 1 2 80 2R 8541555 8541626 ACCAGCAGATCTATGACTCC 58 8541668 8541687 TTCGAGATCCCATTTCCCTG 59 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 3 6 6 80 2R 8765629 8765648 TCTTGGGTCTGTTTACAGCA 59 8765510 8765587 CCATGAGAACCTCTTTCGGA 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087774 3 1 2 97 2R 9046337 9046355 TCACATTGCCGATCATCAG 58 9045768 9046276 GAATTCCTTCGTAGCTGGT 57 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 3 3 3 138 2R 9849830 9854266 CATACGTTCAAGCTGGAGC 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 1 4 4 122 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877015 9877037 CCACTGATTTAGCATCTTCATCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 1 4 7 84 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007 3 1 4 172 2R 11027442 11027460 TACAAAGCCCTTCGTTTGC 59 11027596 11027989 GATTATCGTGCGGATGCAC 59 NA Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112517 2 1 2 107 2R 11346762 11352870 TAGTAGCTCAGCACCATCG 59 11352941 11352959 GACTTCTCCATCTCGTCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113082 1 1 5 82 2R 11443920 11443940 GCCTATATCTGTCCCAATCAC 58 11443981 11449338 GCGTTGAATACATTACGATCAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 1 2 13 101 2R 11856643 11856663 CGAAACTAGCTGTCTTGTGAC 59 11854017 11856583 TCACGTAGATGGTAGTACTCTC 58 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 1 2 2 137 2R 12083326 12083344 ACAATGCGCTACTTTCCAC 58 12083148 12083226 CCTGTACATCGTGACATCCA 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087088 2 1 4 80 2R 12391124 12412886 AGAACTTTCACCAGATCATGTG 58 12412924 12412945 TCTCGATCTTCGTTCATATGGA 59 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 3 3 3 80 2R 12508881 12508900 CTACTGATACGACCGAAACG 58 12508942 12509025 CAGTGATTCGAAGAGTGGTG 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 2 3 8 82 2R 13408430 13410372 TAATGAATCTGTGCGGTCC 57 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840 1 1 3 80 2R 13574429 13574766 AATCCTCACCGAAAGGGAG 59 13574810 13574828 GATATGGGATCATCCGCCT 58 NA Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 3 3 3 136 2R 13593966 13593984 CTCAAGACTGATCCCATCG 57 13592685 13593866 TCGTTCAAATTCTGCTCGA 57 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 2 2 4 129 2R 13755954 13755974 ATCTTCAAGATGTTGCCATCG 59 13755585 13755802 TGCACTTATCTCCCACTTCG 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 2 5 5 81 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042923 14042942 TTAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0301148 1 1 8 160 2R 14309054 14311646 GGACCTTTATAATACAGCCAACC 59 14311840 14311858 TGATCTCTTCCTCAACGCG 59 NA Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 2 1 1 88 2R 14857641 14857661 CAGGGAGCAAATTATCTACGA 57 14857507 14857525 CCAGCTTTGTACTGTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0100137 3 1 3 82 2R 14947145 14947246 GGGTGTAAGTATACGTGTCCT 59 14947290 14947308 CAGTATCGCCTTGAGAACG 58 NA InUTR Drosophila melanogaster 61 ena FBgn0000578 FBtr0100174 3 1 6 127 2R 15047423 15047441 GGTGAACTCACAGATTCCG 58 15047532 15047694 GTTGCTGATACTGAGAGGG 57 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 2 7 10 80 2R 15296095 15297142 CCCAAGAAGATTACAAAGTGGG 59 15296036 15296058 AAACTGGAGTGGATCTTCTATCC 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 1 4 6 90 2R 15319744 15319818 AAGAATTGCTACGGCAGAG 57 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 2 4 4 80 2R 16355268 16355717 AGCTGGACATACGATTTGCT 59 16355760 16355778 CCTTGACAGTCTCATGCCT 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 3 4 15 149 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910961 16910979 TTGTCTAGTGGTTGCTCCC 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 1 2 2 91 2R 17209381 17209399 GCTTTGTGCTGTCAATTGC 58 17209253 17209329 CGTATGACCCTTTCTGTATAGC 58 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 2 4 5 148 2R 17956166 17956252 GGAGATAATTGAATTCCCAGCAG 59 17956360 17956378 TGTCCACAGTCTTCTGCTG 59 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556 2 1 5 80 2R 17954776 17955939 GGATATCGACAAGCAACTGG 58 17955981 17956000 TCCTCGGGATCGTTATTTGG 59 NA Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 1 3 3 80 2R 18025742 18039164 CATCAACCACTCACGATTCTG 59 18050413 18050433 GAGACGCATACTATGTTGGTG 59 NA InUTR Drosophila melanogaster 61 dve FBgn0020307 FBtr0071775 1 1 2 118 2R 18150941 18168184 AGTGAATCCCAAATCACTTCC 58 18168264 18168282 TGTCGGTCTCGATATTGGG 59 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 2 2 2 83 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361780 18361798 GTACACTTTGGGCATCTGC 59 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290095 3 1 3 121 2R 18764860 18765273 ATACCCTCCCTGGATCTCC 59 18765708 18765727 TGAATAGCCTTGGAAAGGCT 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 1 8 13 140 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 1 4 13 83 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071955 1 1 3 85 2R 18945977 18946584 ATTTGGCACAAGGTCTCCA 59 18946633 18946651 CACTGAAGATAACGGCGGA 59 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071955 3 1 3 87 2R 18945975 18946582 CCATTTGGCACAAGGTCTC 59 18946633 18946651 CACTGAAGATAACGGCGGA 59 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 3 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 81 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484835 19484916 CGAGTACATGCCTTCATGC 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 1 2 4 80 2R 19797345 19799206 GGTCGTACGATGACTCAGG 59 19799246 19799268 CGTACAGATATAGATTTGGGTCG 58 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 2 3 3 101 2R 19948508 19948684 AGAAGAACATCAAGCACAGTG 58 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 3 2 3 113 2R 20090333 20093343 ATTGGATCGTAGCATCTTGC 58 20090079 20090097 TCGTACTGCTGGAATTTGC 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 3 7 8 119 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878689 20878708 ATTCATCCTGGACCGATGAG 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 3 2 8 102 2R 20885209 20885809 GTGCTCATTAACTTCTCGGTC 59 20885127 20885149 CCATCTTCAATCCATTGACTACC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092 3 2 3 93 2R 20925045 20925237 GATTCCTAGACACATCCAAGGA 59 20925291 20925309 TCCATATACGCCTCGTCTG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 3 9 9 80 3L 142813 142833 CTGCTTAGTGCAGAATTAGGC 59 142873 142956 CAGGTCGAAAGAGTTCTTTGC 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352 1 1 3 96 3L 147066 148466 CCAATTGATCGCAATTACAAGC 59 148521 148541 GTAGTTTCTGGTGTGCTTCAC 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 1 4 4 93 3L 177318 177390 ATCTTAGCACAACCGTTCAC 58 177244 177262 GATCAAGGGACACTCTGCA 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 2 3 3 93 3L 213968 214042 TATCTCTTGCGGATGGTGAG 59 214098 214116 TTGTCCGACGATATCACGA 58 NA Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 1 2 2 162 3L 317402 317473 TGAGCCAGAACGAATCCTG 59 317599 317617 TCTCTACTTCGGTTTGCGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 1 2 2 80 3L 709123 709144 TTACCGATGAAGAGGAAATTGG 58 709008 709083 CGTGAGATTCAACAGTCTCC 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 1 6 6 80 3L 998875 998894 CCGAATACATAGTCAGTGCC 58 998722 998833 AGTTACTCAGATCCAGACGA 57 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 2 6 6 80 3L 998874 998893 CGAATACATAGTCAGTGCCC 58 998721 998833 AAGTTACTCAGATCCAGACGA 58 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 3 2 2 92 3L 1196582 1196601 TTTGAGCCACATACGATTGC 59 1196653 1196955 GTCATCGTTGGGAATTAAGGAG 59 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 3 4 4 81 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326126 1326210 CAATGTAGGTATAGATCAGGTCCT 59 NA Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 1 1 2 85 3L 1330923 1330941 CTAAAGGTTGTCTCCGCCT 59 1331305 1331323 GAATCCAGTCCCAAGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 stet FBgn0020248 FBtr0072712 3 1 2 80 3L 1488023 1488114 GGGAGCTACTAAGAGATAAATGGA 59 1487896 1487916 ATTCCTCGACTGATATTTCGC 58 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072704 3 1 3 113 3L 1525382 1525649 CTGCAAAGCATCAATGTGC 58 1525287 1525306 ATCGTCCTGATCATCTCTGG 58 NA Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 2 2 2 103 3L 1890363 1890383 GCTGACCATATTCTTCTTGGT 58 1890446 1890632 CCACAATCATGCAAATAGCTG 58 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858,FBtr0110856 2 2 4 110 3L 2124603 2125247 CTCAATACGGAACCAAATGC 57 2124512 2124530 TGACAAACTTGTGACCCTC 57 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302679 1 1 12 174 3L 2465570 2465983 CCAGATGGATTCCTAGTCAGAG 59 2466116 2466136 GCTGAAGAAGCTTGTATAGGG 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 5 5 121 3L 2629234 2629252 GAGTGCAGTCCGTCTACTG 59 2611994 2629150 ACGCAAATCTAGCGTTTGTG 59 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0273190 3 1 2 124 3L 2660121 2660201 GTTGGAACTTTCCTCTCGG 58 2660288 2660307 TAGATGAGAGCTAGACCCTG 57 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0072977 2 1 2 81 3L 2962474 2962568 ATAATGTTACCTCTGCCATCTC 57 2962604 2962628 GGTACATCTGTATATGATAGTAGGG 57 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 2 4 4 72 3L 3054202 3054220 TCCAGATACGAACGATGTG 57 3054322 3054340 TGACCGATAATCGTTCACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123 1 1 2 87 3L 3112558 3112640 TTTGCTCGAGGAAATTCCC 58 3112489 3112507 GATCGAAAGGTGGTTACGT 57 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0290290 1 1 2 80 3L 3613867 3614078 CTAGATGAGCTTAAAGATATCTCGC 59 3614114 3614134 AAATGTACCTATTCCCGAGCT 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431 3 1 5 141 3L 3754050 3767144 CAATAACGGAAACTGGTCACC 59 3723841 3723861 TTGTTGTGCATCAGTCTTGTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073269 2 1 6 82 3L 4131171 4131189 GTTCAGAGCGTGAACTTGC 59 4129778 4131129 GTCAACGCTATCTTCATCTTGTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0113135,FBtr0073266 3 2 6 187 3L 4133819 4134470 TTCGACTAATCCAGAAGTGGA 58 4132204 4133558 CTTTGGACGCTTGAGAGTC 58 NA Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 3 3 3 103 3L 4369894 4369913 CGGTATACACCTTCATGTGG 58 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 3 3 3 150 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552226 4552247 TCGTCTACCCAGAAGTATTTGG 59 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 2 2 2 157 3L 5357299 5358050 CGCCTAGAACACCATTCGA 59 5357092 5357184 CATCTGAACTGATCTATGATCAACC 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112714,FBtr0112709 2 4 8 199 3L 5724550 5724568 CAAGGATTTGTACTCGCCG 59 5724731 5727578 ATTTCCGCGTTTCTTGCTC 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 3 2 6 135 3L 5764463 5764727 TGCGAACAGACAATAACGG 58 5764826 5764844 GGATAGAGGACCCTCTTCG 58 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0300010 2 1 2 125 3L 5810676 5810696 GACTACTGCTTCCATAATGGC 58 5806561 5809755 TTCCTGCCAAGAGATGTCG 59 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 1 2 2 80 3L 6173209 6173292 TGTGAGTGCAAGGTTTGTG 58 6173147 6173165 CACACGCTTCTCATGAGTC 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 5 6 107 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555512 6583716 ACATAGATGTCTTCTCCCGT 58 NA Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 2 1 1 79 3L 6957508 6957528 AGTGGAATTCGGATAAGTTGC 58 6955002 6955020 GAAGAGGTTCACATTGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 2 2 2 147 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327859 7327878 GAGAAGTTGCCGTAGATGTG 58 NA InUTR Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 2 2 2 84 3L 7352943 7353033 TAATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0301611 3 2 3 92 3L 7375356 7375374 ATGACCAGGGAGTTGATGC 59 7375428 7375500 AATGATCGAGAATGCTTGGTG 59 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 1 3 3 80 3L 7558021 7558041 CCATCAATAAGTGCGATTGTC 57 7558083 7558163 GGCATTCGTCGATATCGAG 58 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 3 3 3 83 3L 7759493 7759570 TGAAGAGCTAAGGCAAACG 58 7759428 7759447 GTTTGCAACCATATCCACTG 57 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 2 4 5 109 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586650 8586668 GGTAAGTCGATGTCCATGG 57 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 1 4 4 120 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727222 8727351 GGACAAGTTCTTGACTTCGAC 59 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 1 2 4 80 3L 8735364 8735448 GCTGAACATCAATTTGAAGCC 58 8735304 8735324 AAGATGAACATCCTCAAGCAG 58 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 1 2 4 80 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330138 9330158 AGACCATGAGAGTTCTTCGAC 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491 1 1 6 89 3L 9338156 9338177 CGTTGAACCAAAGTAAGATCAG 57 9340742 9340760 CACCACCAATGTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 3 2 3 143 3L 9360647 9360665 CCTGCTCCAAGTGTTTCTC 58 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 2 2 2 60 3L 9404830 9404921 GATTGCTATCCGAGACGCT 59 9404944 9404963 TCCTCAACAATCCACTCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 3 2 2 126 3L 9405082 9406320 GCACTATTTGCTGTACCCA 57 9406408 9406501 TAAAGTTGAATCTGCAGAGGG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 2 5 5 81 3L 9410806 9410824 ACTGCAGCAGATAACACAG 57 9408558 9410762 ATGAATTATCTCGGCCATGC 58 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 2 4 4 80 3L 9463472 9463490 GACGTTTACGCTCTTCTGC 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 1 4 4 80 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463531 9463673 CATCCTTCGTGTAGATTTCCG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420 2 1 5 114 3L 10580736 10580754 TGATCCCTTCTTAGCAGCC 59 10580985 10582464 AGCAGTGGCATTTAATATGGC 59 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 3 3 3 99 3L 11051886 11051904 TGGAATGACTATGTGGCCA 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 1 2 2 102 3L 11143173 11143247 AAATGTGTTGTGGCAAGAC 57 11143089 11143107 TTGTTGGAGGACAAAGGTG 57 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220 3 1 2 132 3L 11138439 11138460 GTGAAAGAAATCGACAAACGAC 58 11137496 11138348 AAAGTATCAACTGGGTCTGGG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 3 5 5 117 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694509 11694589 GCTGTCATTTACATGCGAG 57 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 2 1 1 60 3L 11788070 11788089 CCAAAGTAAAGCTTCAACCG 57 11788167 11788189 GAGAGTAGGCTCAATGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 2 3 5 134 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005707 12005726 TGATTGCTCACGTTCTTCCT 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 3 4 6 119 3L 12205860 12206204 TTCTACGACGAGTCCAATCC 59 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 1 2 3 80 3L 12406596 12406614 CAGGATCGATATCCACGAC 57 12405543 12406552 TGCTGAAGGAATTTCTCCG 57 NA Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 2 2 2 114 3L 14023964 14023982 CAAGTCCAAGTATCCCAGC 57 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 2 2 2 233 3L 14742834 14744382 AGGCAATTTAAATCAGGGCA 58 14742620 14742638 CTCAATTGAGTTGCTGCTG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699 2 1 2 99 3L 14770509 14770528 AGATCTACGAAGGCTCTGTC 58 14770332 14770450 ATTACTTGTACTGATTCGACGC 59 NA Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 1 3 3 80 3L 14981281 14981299 AATCCCTCATCGTTTGGGT 59 14981342 14982960 GTATCATCGTGCCCAATTCG 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0301510,FBtr0100036 1 4 5 132 3L 15861150 15861671 CCGCCTGTAAATGATGAAGAC 59 15860675 15860693 ATGCTAAGCTCAGGAGCAG 59 NA Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 3 2 2 102 3L 16029308 16029326 GGTCAGGGATTACCTGGTG 59 16029389 16029470 GGTGTTCATGTTCTTGTATCCA 58 NA Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 2 2 2 137 3L 16100797 16100818 TCTGTCTCCGTTAAGATTACCC 59 16100615 16100699 CAAATCAGCCAAAGCACGT 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0114589 3 1 6 189 3L 16107925 16108769 GACCAAGACCATCAATCAGG 58 16108918 16109140 TAAAGTTATCGATGGACTCTGC 58 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 3 4 4 96 3L 16784161 16784181 GCAGACGATAATGTAACCGTC 59 16784030 16784104 CCTCTCCATATTTGCATGCA 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 1 4 12 131 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302781,FBtr0302779 1 2 12 80 3L 16859980 16859999 GACCAAGGAACTCATGAGTG 58 16860040 16877032 CTTATAATGGCACCCTTCTCG 58 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 3 3 10 116 3L 16928314 16928332 TATTCACCAGAACCTCGCG 59 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA InUTR Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 2 3 10 85 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922045 16922128 CAATCGAAAGACCCACTGG 58 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 3 4 4 92 3L 17008152 17008170 AAAGCCGAACTGGATACCT 58 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 3 4 4 92 3L 17008152 17008170 AAAGCCGAACTGGATACCT 58 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 2 2 2 83 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330774 17330854 GGAATATTATAGCTGCATCGGT 58 NA Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 1 2 2 80 3L 18796088 18796171 CTTAACAAGCTCTGTCCGA 57 18796026 18796046 ATCATCTATCTTGAACTCCCG 57 NA Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 3 2 2 80 3L 18865308 18865331 CTCAGATTTCTACTGCAAGATCTC 59 18865197 18865270 AGTTCACAGTACTCCACCTC 58 NA Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 1 1 1 75 3L 19530153 19530171 TAACTCAACATGCCGTCCT 59 19530272 19530290 AAGGCATATCGAGGATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 1 5 5 80 3L 19795361 19795441 GGCATGTATTTGTGGTACGA 58 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 1 5 5 143 3L 20381818 20381836 CTACTTCGAGCCCAAGGAC 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 2 2 2 82 3L 20385586 20385755 AGTCCATGTTGAAAGTGGC 58 20385522 20385543 CCTGGTCATCTTTCAATTTCAG 57 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 2 4 4 81 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508474 20508552 CAACCATAGCCCGAATCCA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 1 5 5 110 3L 21192059 21192082 GATGGTAGACATATCTACAACCTG 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 1 1 1 69 3L 21209607 21209625 AATCCTTCCCAAGCTGGAC 59 21209403 21209422 AATGTCTTCTGTGAGTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 1 3 3 80 3L 21257017 21257035 TCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 3 1 1 119 3L 22253761 22253779 TCATCGTGAATGTATGCGG 58 22253410 22253428 AGTGTGACAGCCAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0078903 2 1 2 80 3R 134141 134352 CAAGTGCTTATTTGCTGTGC 58 134395 134413 GGTCTGAGTAGGTTGAGGA 57 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 6 10 83 3R 570241 570259 AAAGTTTGGAGGTCTTCCC 57 569895 570197 TTCAGTTGAGTATCCATATCGG 57 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0113409 2 1 3 202 3R 1312414 1312432 CTGGAGGCTATCCAGATGC 59 1312597 1313566 ATAAAGAAACCTTGTGGCGG 58 NA DesignRelaxed Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 3 3 4 97 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385831 1385849 CTACCCTGGTAAATGCGCT 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300913,FBtr0078676 1 2 12 81 3R 1587419 1587437 CATTAGCTGGAAGAGCGAC 58 1586953 1587375 ACATACCCAGTTATGTCCGA 58 NA Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 3 2 2 82 3R 1651095 1651114 CTGAAGATGCTCATTCGCAG 59 1651159 1651231 GTAGCGATTCATGCGATCC 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 3 5 5 156 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684160 1684178 CATCACCGAAGCACAATCG 59 NA Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 3 2 2 94 3R 2037880 2037899 CATTCGAGTACTCCGAGGAG 59 2037956 2038123 GGACTTGATGAAGCGTTCG 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 3 2 5 99 3R 2584143 2584201 CAAGCCAGATGTCTTTCCC 58 2584062 2584081 CTCTGCTATTTGAGAGCTGG 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494,FBtr0300495,FBtr0113199 1 3 9 112 3R 2922690 2922712 AGCAGTAGTAATCCTACAAGCTC 59 2922534 2922618 GACACGTGTCTCATTCCCA 59 NA Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571 1 1 2 170 3R 3005350 3007283 GATTCCAGCAAATGGAGCC 59 3007415 3007435 GTGGATGTATCGTTACTGGGT 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602 1 1 3 99 3R 3044372 3044393 CAACAGGACGATAATAAAGCTG 57 3044052 3044312 TCCCGACATAGAAATCAGC 57 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 2 2 2 94 3R 3077084 3077103 CACCACTTCAGCTCCTAGAG 59 3076954 3077027 AGACATTGGTCATCGACGT 59 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 3 2 2 95 3R 3077084 3077103 CACCACTTCAGCTCCTAGAG 59 3076953 3077027 AAGACATTGGTCATCGACGT 59 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0300016 3 1 2 108 3R 3077602 3077620 TATCGTACCTGACGATCCG 58 3077229 3077531 AGCACAAGCTCTAACATACG 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741 2 3 4 159 3R 3588101 3588183 TTGAGTACGTGGATAACAGG 57 3588374 3588392 TTGCTGGTATCGTATTCCC 57 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0081822 2 1 2 80 3R 3832495 3832573 GACGGAAGCTTTAAGCTCG 59 3832433 3832451 CATAGCAACCCAGATGGCT 59 NA Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807 2 1 2 121 3R 4064538 4064556 ACCGGTATAATGGCCTGAC 59 4063957 4064456 GTTTATTATGCAGTGGAGGGTC 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 3 2 3 96 3R 4068184 4068202 GATCGTATCGCTTAAGGGC 58 4068004 4068126 GCTACTGCTAGGTTGAATCTG 58 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 1 3 3 92 3R 4184860 4184937 TGCTAACGATATGAACGAACTG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 3 2 2 60 3R 4576505 4576526 ACAGGAGTGATGTATTTACTGG 57 4576400 4576419 AGTGAATGATCATGAGCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 2 1 1 121 3R 4632205 4632223 CATAACCGCGAACTCAGAG 58 4632361 4632379 TTCCAACGTTTGAGCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 1 2 2 75 3R 5121440 5121458 TTAGTGAACTGTCGACCGT 58 5121249 5121268 CAATACGTTTGTGTCTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0082064,FBtr0082065 2 2 4 80 3R 5348543 5348564 AACTGGCACGAATAATCTTACC 58 5348604 5349933 ATGCCAGAGACTTGATTGCT 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 2 2 4 99 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515509 5515528 TAGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 1 2 3 82 3R 6049760 6049887 TGGAGCACTTTATAGAGGCA 58 6049697 6049715 GAATTCCGGGTAATGCAGC 59 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0082301,FBtr0300078 3 2 3 80 3R 6638916 6639198 GATGACGATCAGATCGTGG 57 6638854 6638875 ATCCTCACAGAATATGGTATCC 57 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273345 2 1 7 98 3R 6691358 6692260 AGCATACCAGTAGTCATTTCGA 59 6691281 6691299 TCCATCATCGAAGACGTGG 59 NA Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 2 2 2 60 3R 7043273 7043349 CGTGAGACATGAAAGGGAG 58 7043373 7043391 GATCTCCCACTTGGATTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 1 2 2 60 3R 7068725 7069511 GCTTGTGGGTATTACCGGA 59 7068683 7068701 GTTCCGGTACTTGTACGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 2 2 6 89 3R 7419480 7429873 CAAAGAAGAGGGTGCTGAG 58 7419409 7419427 GATTCTTCACGTTCCTGGG 58 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 3 2 6 90 3R 7419479 7429872 AAAGAAGAGGGTGCTGAGG 59 7419407 7419425 GCGATTCTTCACGTTCCTG 59 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 1 2 2 80 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617678 7617697 AGTCTACGGGAATGAAGTCC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 1 4 4 72 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646923 7646941 ATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 1 5 15 147 3R 7815047 7817812 AGTCCTCAGATAACTCCAGC 58 7814509 7814937 ATGGTGTCCACATTGAACG 58 NA Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 1 2 2 99 3R 8210528 8210937 ACTCACGGACTACTATTTCCC 59 8210998 8211016 GATTGTGTTTAGCCAGCCC 59 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 2 3 4 83 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338672 8338691 CGATCCAGAATAACACCACC 58 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 3 3 4 84 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338671 8338690 CCGATCCAGAATAACACCAC 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 2 4 6 154 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 1 5 5 135 3R 9476212 9476541 CAAGGGTGACTTTGAGCAG 58 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 3 2 5 118 3R 9522484 9522563 AAACTTTCCGGATAGCTTTCAC 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 2 2 2 68 3R 11170611 11170629 CTTCATTGTGGTGTTGCAG 57 11170496 11170516 AAGTTTCGCAGTAAGAACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 1 3 3 90 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616532 11616551 TGTAGCTTCTCACTGTTGCT 59 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083244 2 1 3 80 3R 11742328 11743286 CGATCGAGAAATTTCCCGA 57 11742266 11742284 GGCGTAGTTGGTGTAATCC 58 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0113241 3 1 2 99 3R 11998228 12003270 TGTTTGTCTTCCAGATTGCG 59 12003330 12003350 GAGGACTGACTAATATTGCGC 59 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0300195 1 1 2 80 3R 12202043 12202061 TACTCGCAGTACTTCACGT 58 12201789 12201999 GAGAATGATATGGCCACCG 58 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 2 4 4 80 3R 12474342 12474428 GGTAGACATTAAACGCTATGC 57 12474470 12474488 ATCACGCCCTTAAGAACAC 57 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 3 3 4 95 3R 13044803 13044894 CAGTATCCATCACTTTGTATCGG 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 2 3 4 91 3R 13044801 13044890 ATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368 1 1 2 137 3R 14555950 14556056 CGCGAAAGAAGGATCATCTC 58 14556156 14556174 CGGTGACCTCTATACTGGC 59 NA Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 2 2 2 119 3R 15279980 15282853 CTAATGAGATCGGACCTGGA 58 15282935 15282953 GAAGAACTTCACATCGCCC 58 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 3 2 3 82 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873435 15873529 CAAATCCACCCAACAGAAAGG 59 NA Nonspecific Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 1 3 5 80 3R 16367271 16367416 CGAAGACAGGATAATGTCCG 58 16367210 16367229 TCTTCGTTGAACTTTAGGGC 58 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113255,FBtr0083959 2 3 8 179 3R 16625852 16625871 TATGATTACCCGAACGGTGG 59 16626013 16628020 ACCAACTCCCATAAGGCTC 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 3 3 4 175 3R 16881621 16881701 AGTTTGTTAATGGACTGGGC 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 2 2 2 80 3R 16965286 16965416 GCCATGGTATTTACAGGTGAG 58 16965458 16965476 CAGCGATAAATGGGTCCAC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084073 1 1 22 80 3R 17198797 17200794 ACAGAGGCTCAAGATACGG 58 17198735 17198755 GTAGATGTAGTTGCGGAACAC 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 1 2 5 154 3R 17351033 17351051 CAAAGGCGATACCAAGCTG 59 17351166 17351263 CGCGCCAAATAATAAGAAAGGA 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 3 4 6 91 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615472 17616438 CGCACGAATATAAGCACCG 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 1 4 6 89 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615474 17616441 CACGAATATAAGCACCGGAG 58 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515 3 1 2 119 3R 18239892 18239913 CGTTTGACCTGTTTAATTCAGC 58 18239992 18243842 GCATCATATTGTCCATGGGC 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 2 3 3 64 3R 18288986 18289008 GGTAATGAAGTCGTATTTGTCGG 59 18289086 18289106 TCACGATCTTGTCGTTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267,FBtr0113268 2 2 2 60 3R 18555467 18555543 TGATGCTTGTATCCTTGCTG 58 18555563 18555584 GCAAAGCATACTGGATATACGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 3 3 3 87 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590550 ATTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0113392 1 2 5 123 3R 19799264 19799879 GACTACTCGTGTCCCAGTC 59 19799966 19799984 GTTTCGATTGCTCAAGCCT 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 3 4 4 118 3R 20048094 20048115 CTTCCTGAGAAAGTATCTAGCC 57 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273323 3 1 2 158 3R 20175809 20175827 GGTGCTAATGCAGTCATCG 59 20175947 20176458 TTGTGTCAGTTCTTCGATCAG 58 NA Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 1 2 2 80 3R 20771584 20771602 ATCTGAAGCTACTGTGCGG 59 20771646 20771715 TGTCCTCAATATCGGCCTC 59 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 1 3 3 96 3R 20924348 20924366 CTGTGATACTCCATTCGCC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 CG11889 FBgn0039308 FBtr0100614 3 1 1 70 3R 21096958 21096979 GTTCCGAGTTTATTTGAGTTCC 57 21097068 21097086 ATCAACGACGCAAACACAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 2 1 2 80 3R 21419245 21419320 GAAGTACCTCAAGTTCATGAGG 58 21419186 21419204 GCTGTGTCACCTTGATTGG 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 2 5 5 61 3R 21451885 21452079 CCAACCTGCTCAAGAAGTG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290137 1 1 5 80 3R 21742350 21742425 CAATCCACGAGTACAGACCT 59 21742468 21742486 AAATAAACCCGCCCAATGC 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290141 3 1 5 93 3R 21736983 21737001 CATCATAAAGGGCACCCTG 58 21737056 21737135 GAGTGTAAATTCAGGCCACTC 59 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 2 3 3 81 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905449 21907623 CCAAGACAACCTTCTGATCG 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0085001 2 1 6 83 3R 22086922 22086941 TCTGGGTGTTTCGTAATCCA 59 22083746 22086879 TGAGATTCGAGTGTAGTTTCAC 58 NA InUTR Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 3 2 10 82 3R 22423774 22423795 GGAGACCCAGGATGATAAAGAG 59 22423835 22424309 GCTTCTCAGCATTAATCATGGA 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 2 3 9 95 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 3 2 2 80 3R 22769910 22769997 AGATTGTCGAATACTATGGCG 58 22770037 22770057 AGTCCTTGTTCATGTAGATGG 57 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155 2 1 3 81 3R 23080441 23080812 CAATCCAAAGAGCCACAAGG 59 23080853 23080874 GATATGTTGGTGTGATGTGACC 59 NA Drosophila melanogaster 61 woc FBgn0010328 FBtr0112857,FBtr0085178 3 2 2 82 3R 23083857 23083875 GTACTACGAGCGGTTTACC 57 23083729 23083812 TGACAATGTATTGCGAATCG 57 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 2 1 1 80 3R 24108437 24108455 ATGGCACTGGTCTTATTGC 58 24108557 24108577 ACAGCTTGCTGATGTTATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 1 2 10 80 3R 24962359 24962377 TGCATTCCCGTAATGTTGC 59 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 1 2 2 84 3R 25570661 25570679 ATATGCCTGGAAGGACACG 59 25570537 25570614 CCTTAAGCAAGCTTCTTCCG 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 1 4 5 81 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 3 3 3 93 3R 25864784 25864802 GGTCTACGGATACTCGCAG 59 25864603 25864622 GATTTCGATCGTGTAGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 1 5 5 81 3R 26289005 26289024 TCTGCTCTATGACATCTCCA 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 2 4 13 197 3R 26421341 26426933 CAGCGGAACAAATTAGGCA 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 3 4 13 197 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421161 26421181 TGATCTCCACAATAGTCTCCC 58 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 1 2 4 87 3R 26643856 26643874 GTGGAAAGGAGAAATCCGC 58 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 3 5 5 82 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427004 27427022 GCTCGTACCACATCTTCAG 58 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085815 3 1 2 146 3R 27438275 27438293 AAGGACGAATACTCAGCGG 59 27438402 27438619 GGCATCGCCAACATATTCAG 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 2 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 3 4 7 81 4 261387 261410 TCTAAGGGTCAGTCTATGTATGTC 59 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089128 2 1 2 198 4 399185 399359 CGTACACATACATCGAAGGAG 58 398814 399026 TAAACTGGGATGAGGCTGAG 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 1 3 3 130 4 645441 645459 CCAGACTAAAGCACCTCGT 59 645221 645240 CTGGTTACTTCTTAGGCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 2 3 3 71 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645220 645239 CCTGGTTACTTCTTAGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600 3 1 2 80 4 844171 844189 GAGCATTCCGACTTAGGGA 58 823936 844129 CATGCTATCGTAATGAGCCTG 59 NA Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 3 2 2 81 4 1164123 1164144 CAACATATAGGGATCCCTTCAC 58 1161982 1164083 CTCATTCGTAATGATCCCAGC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 2 4 8 80 X 165640 166467 CAGCGATGTTGATTACACCA 58 165579 165599 TTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100582 2 1 8 186 X 167373 167393 GATCAACTGCTACAAGTACCA 57 165900 167226 AACAATCAGATTGCTGTTGC 57 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 1 4 4 80 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 3 2 2 88 X 971123 971253 CAATCGAACAGCCATGGAC 59 971053 971072 TATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 1 2 3 83 X 1365310 1365329 TTTAAGGACTTCGTGTACCC 57 1365375 1365452 AACGTAATACTCGTGCGAG 57 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 1 5 6 91 X 1383539 1383557 ACCATCATCTCAAGGAGCG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 1 3 3 191 X 1672702 1672720 AAACGTGGCTATGAGATGC 58 1672990 1673137 TTTCTGTCCATCGACCTCC 59 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 3 3 3 68 X 1672940 1672958 TTGGAGTCACAGACTGGTC 59 1672990 1673137 TTTCTGTCCATCGACCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 3 3 3 81 X 2243028 2243046 GTAAGCTCTTGTCCCTCGT 59 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 3 2 3 81 X 3408480 3409290 TGTGGAAACTTGGTGTCGA 59 3409335 3409353 CTTTAGGCAGAAGTGCCAG 58 NA InUTR Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 1 4 4 80 X 4619217 4620278 CGACAGTTTCGGTTACATCTC 59 4620320 4620338 TTGAGCGGATAGCGTATCG 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 2 5 7 102 X 5277590 5277611 TCTAATGACAATATGTCCGGGA 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 2 2 3 80 X 5559770 5559788 GGAGGACTTTCTCCTGTCC 59 5559648 5559728 TTTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 2 2 2 117 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962705 5963099 CTTTGGGCTTCTGAATAAAGGT 59 NA InUTR Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 1 2 2 116 X 6215018 6215857 ATGTATTCGAGCAGGTCGG 59 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 1 2 2 137 X 6586546 6586564 ATCTATGGCGATGAGGGTG 59 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 3 3 6 154 X 6681509 6681529 GGATGAGAATAGTCAGTGCTC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 3 3 6 106 X 6680839 6681140 CAAACGAATCGGGTTTCGT 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300838,FBtr0300841,FBtr0100209,FBtr0100212,FBtr0300842,FBtr0100203,FBtr0100211 2 7 21 82 X 6980001 6981654 CCGGAATGTCACGTTATGC 59 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 3 6 6 116 X 7944307 7944478 CCAAGAAAGATGAGTCCGC 58 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 2 6 6 116 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944208 7944226 CTCGAACTGCTATCACTCG 57 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 3 3 7 100 X 8111096 8117667 CCTAAAGCAATGGAATCGC 57 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219 3 1 3 106 X 8491652 8491670 GAAGAGTATGCACCGTTCG 58 8491740 8492117 GTGAATAACGTCCGAACGT 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071366 1 1 2 189 X 9502314 9502759 TCCAAGAATGAGCTAAAGCG 58 9502144 9502162 GTGAACGTTTCAGCTCCTG 59 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 3 4 4 83 X 9674913 9675199 GAATGCCCATGATATTGAGGC 59 9675244 9675262 TTGTCCGAAAGGTTCACCA 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071409 1 1 3 140 X 9859800 9859883 GATTGTAGCCTAGACATTGAGC 59 9859984 9860002 AACAAAGAACGGTTCCACG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 3 5 5 157 X 11027710 11028925 CCATGGTATACAAATACACAGCC 59 11027575 11027593 GTAGATGCCGTTCTTGCAG 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 2 3 3 237 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323198 11323281 TGGACACAATGCCAAACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0073547 2 2 4 86 X 11331114 11331132 CATACTTGGAGGTCTCGCA 59 11330816 11331066 TGGATACGTTATTCTCCTGCA 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073773 1 1 6 98 X 13265392 13267908 CCCATCAAGAAATAATGAGTCG 57 13267967 13267985 TAACGTACTGTTGCTGCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787 3 1 2 192 X 13306683 13306701 CAAATAGCATGGGCCTCTC 58 13306439 13306529 TCCTTGGCATTATCATTCAGG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301923,FBtr0301922 3 2 10 129 X 13493481 13494111 AGAGTACACCTCCGAGGAG 59 13490706 13490729 GTATTCTTTCAGCTGATCATCGAG 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 3 2 5 80 X 13544086 13546917 GATACCTGTATCAAGATCGCG 58 13546959 13546977 GAGGACGCCGATATTAGGT 58 NA Drosophila melanogaster 61 Ste:CG33246 FBgn0053246 FBtr0300095 3 1 1 60 X 13942733 13942751 AGTGAACTGGCAACATGTC 58 13942634 13942652 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 3 5 5 166 X 15688455 15688538 AGATCCACGTAACAAAGTTCC 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 2 4 4 85 X 15769163 15769181 GCTAGATTTAGGCGATGGC 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 1 5 5 83 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179125 TCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 2 3 4 91 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 1 3 3 124 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 2 3 3 88 X 16310044 16310062 GAGGAAACCAATCGGAAGG 58 16310114 16310201 TGCTCTTTCAAGGACTGTG 57 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 1 3 4 80 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022947 17023197 CAATGACCTGATGACCCTG 57 NA Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 3 2 2 143 X 17314084 17314102 ATGGTGAACTTCCATCACG 57 17313899 17313978 GCCATGTAGTTTGAAGAAGC 57 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 2 2 2 74 X 17520985 17521004 TATGTGTACGCCATATTCCC 57 17519649 17519667 ATCTTGGATATCACGCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 3 3 6 163 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286877 18286896 GGTGTAGTCCATATCGAAGC 58 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 1 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839 2 1 3 86 X 19793928 19793946 AGTCTTTCACGTTCCTGCA 59 19793994 19794657 GATAGTAACCTCTTCCCAGCA 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089399 1 1 13 80 X 20105881 20105899 TCTACACAAAGCAGACCCA 58 20101659 20104509 CTTCGTCGTCATAATAATCCGT 58 NA Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0077340 3 1 2 73 X 20126835 20126854 GTCCGTTTATCAATCCGCAG 59 20126690 20126800 GCTGAGTCCCTTATCAATGG 58 NA DesignRelaxed Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678 1 4 5 96 X 21221797 21221815 AGCTGATGATGCACTGGAG 59 21221875 21222902 ATGCTTGTACTCGCTCCTG 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 2 4 4 110 X 21313528 21313546 ATTGGTGGGATTAGGAACG 57 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 1 4 4 88 XHet 12051 12367 GATGATAACGATAATCGGAGACAC 59 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 mir-4 FBgn0046821 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32129 FBgn0052129 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-G962 FBgn0086077 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:85Ac FBgn0012026 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:R FBgn0013704 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:H FBgn0013695 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135e FBgn0083008 FBtr0113570 1 1 1 77 X 17039857 17039875 GCCATACTGAGCATAACCA 57 17039798 17039819 GCTTATATCTTCAAGCACAAGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-U1688 FBgn0086044 FBtr0114320 1 1 1 98 X 9824009 9824027 ATTCATGACCAGAGGTGCC 59 9823929 9823947 GTGAATCTTCCACTGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1232 FBgn0082997 FBtr0113561 2 1 1 70 X 6637773 6637794 GTGGTAACTCAATGAAATGCAC 58 6637724 6637742 AATTCTGCACGGATTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ric8b FBgn0030117 FBtr0071318 1 1 1 60 X 9154525 9154744 TTTACTGGACGACAAGCTG 57 9154768 9154786 GCAGATGATGTTCAGCTGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300446 2 1 2 101 X 657548 657566 CTAAGTACCCGCTAGTGGG 59 657016 657484 GTACTTCTCCTGATCCCGTG 59 NA Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111191,FBtr0111192 2 2 2 69 X 22415485 22415503 GATTCGGGTGCTATTCCGA 59 22415672 22415691 TTGATGCCCTCCAAGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 3 2 2 170 X 22246595 22246613 TTATGTGGCCAGACTTGGG 59 22230962 22230981 CACCATTCTCTGGACATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17599 FBgn0031196 FBtr0077363 1 1 1 124 X 21944900 21944919 GACGAGGACAAACTAATGCA 58 21944738 21944813 GTGCCTCTTCCTCCTACTG 59 NA Drosophila melanogaster 61 mst FBgn0020272 FBtr0077211 3 1 1 61 X 21260075 21260093 GGAACGTACGCGAATTACG 59 21260117 21260191 TACCTAAAGTTGGCCTCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077236 2 1 3 84 X 21080897 21082116 AATCCGTCAGGATCGAGTC 59 21080831 21080849 TGTAGGTGTTAAGCGTGGG 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 1 3 3 115 X 21003861 21003879 CATTCGTAACCGACGAACG 59 21003957 21004215 ACTTCGTATGATGTCGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624 2 1 2 181 X 20902535 20902605 ATATGTGAAGGAGGAGCCG 59 20902372 20902393 CGTACTCATCTGGATACTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33498 FBgn0053498 FBtr0089611 3 1 1 100 X 20096993 20097011 GAGTACAAGGAGCTCTCCG 59 20096829 20096929 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 Sdic2 FBgn0053497 FBtr0089610 1 1 1 80 X 20080290 20080377 GTATTCTACTTTGAGCGGCG 59 20080229 20080248 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 Or19b FBgn0062565 FBtr0070003 2 1 1 211 X 19989479 19989497 CGGAGACCCTTCTTCTCTG 59 19989670 19989743 CTTAATCATCACCGTGAAGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG32528 FBgn0052528 FBtr0074793 3 1 1 92 X 19641107 19641292 GTCAACCATACACTCGGCT 59 19641346 19641366 CAGCAGATGTAATATGGCCAC 59 NA Drosophila melanogaster 61 CG14220 FBgn0031036 FBtr0074768 2 1 1 81 X 19495539 19495656 GTAGCGAAGAAGACACGGA 59 19495476 19495494 TTGGAGGTCCCATTCATGG 59 NA Drosophila melanogaster 61 CG14205 FBgn0031034 FBtr0074730 3 1 1 80 X 19488323 19488408 ATGAAATCTGCCTAGGCCA 58 19488452 19488470 GGCAGATCAGGAGTATGGG 59 NA Drosophila melanogaster 61 CG12204 FBgn0031022 FBtr0074783 1 1 1 67 X 19388234 19388252 AATCGGAGGTGTTAGAGCC 59 19388185 19388203 CTGGATGCTAAAGTCGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32537 FBgn0052537 FBtr0074687 1 1 1 174 X 19170264 19170284 CGTCATAAAGATTAGCAGCCA 58 19169361 19169439 CTCGAGATCGGCATTTACG 58 NA InUTR Drosophila melanogaster 61 rictor FBgn0031006 FBtr0074689 1 1 1 80 X 19148555 19148647 TGATGTTTATAGACGCCTCTCC 59 19148496 19148514 TTAGGAGGCAGGAACTTGG 59 NA Drosophila melanogaster 61 Obp18a FBgn0030985 FBtr0074701 1 1 1 147 X 19029759 19029833 TAACTATGTGGCAATCAGCTG 58 19029632 19029650 ATCAGACACCGGCTATAGC 59 NA Drosophila melanogaster 61 CG15048 FBgn0030935 FBtr0299567 2 1 1 72 X 18415013 18415031 AACATCGAGCTTAATCCCG 57 18415064 18415208 CTCGACTCTTAACCTTGAAACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8142 FBgn0030871 FBtr0074472 1 1 1 84 X 17738589 17738607 GACAAGAGCCAGGGTACTC 59 17738447 17738465 CATCATCCACATTGCGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12986 FBgn0030868 FBtr0074474 2 1 1 131 X 17713428 17713447 TACATGTGCCACGACTACTG 59 17713316 17713335 GAATATCCTCAGGCGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8568 FBgn0030841 FBtr0074436 1 1 1 143 X 17345163 17346088 TTCGATCAGAAAGTGTGCG 58 17345038 17345056 CATCATGACGGGAATGCAG 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 1 3 4 80 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022947 17023197 CAATGACCTGATGACCCTG 57 NA Drosophila melanogaster 61 CG8949 FBgn0030812 FBtr0074412 2 1 1 84 X 16967346 16967364 AGCGGTACAGCTTTATGCA 59 16967215 16967298 CGCCGATCACGTTTATCTG 59 NA Drosophila melanogaster 61 wus FBgn0030805 FBtr0074418 1 1 1 90 X 16834013 16834544 GCAAGTGGTAATCCGATTGG 59 16833942 16833961 CCTTTGGAGGTATCGTTGGT 59 NA InUTR Drosophila melanogaster 61 CG4872 FBgn0030799 FBtr0074339 3 1 1 84 X 16776275 16776363 ATATTAACGCTGTGGGAGC 57 16776411 16776429 CAATCCACGTAGACCTTGG 58 NA Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 2 2 2 105 X 16721787 16721805 CATCTGCGGTTATGTCACG 59 16721630 16721719 GGAGTTGATATGTGGCATGG 58 NA Drosophila melanogaster 61 CG9673 FBgn0030775 FBtr0074362 1 1 1 101 X 16597698 16597716 AACAAACCACATCCTGACC 58 16597494 16597512 TACTGGTTAATGGTGCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 mei-41 FBgn0004367 FBtr0074271 1 1 1 80 X 16293401 16293483 TGCAAGGACACGTTAAACG 59 16293524 16293545 CCTCATTGATGAGGAAGTTCAC 59 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 Pros28.1 FBgn0004066 FBtr0074210 2 1 1 125 X 16170852 16170936 ATAACCAGATTCATTGCCCA 57 16171024 16171042 CTCAGTCTGGAACAGATGC 58 NA Drosophila melanogaster 61 CG15602 FBgn0030694 FBtr0074097 3 1 1 110 X 15694061 15694137 CCCTATTCAACGACAGCCT 59 15694207 15694229 CCAGGTTCTCATCAATATGATCC 58 NA Drosophila melanogaster 61 CG8117 FBgn0030663 FBtr0074050 3 1 1 62 X 15538636 15538655 GTTCAGGACTCGATCAATGC 59 15538680 15538698 GAACTGATCCGTCTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6227 FBgn0030631 FBtr0074011 1 1 1 125 X 15241252 15241270 ACTTCTATGTCGAGGTGCC 59 15241359 15241518 GTGCCCAAGTCTTAATGGG 58 NA Drosophila melanogaster 61 CG9114 FBgn0030628 FBtr0074020 2 1 1 94 X 15225597 15225615 TTCAGTTGATCCAAGCCCA 59 15225465 15225487 GATGTTGGAAGACTGAAAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9009 FBgn0027601 FBtr0073972 1 1 1 123 X 14829456 14829478 CCCTCTTTATGATTAACCATCCC 58 14829297 14829373 TTCGGGAACTTGTTCAGGA 58 NA Drosophila melanogaster 61 CG9503 FBgn0030598 FBtr0073974 3 1 1 108 X 14815135 14815269 CATCTTGCTTGGCAATGCA 59 14815045 14815064 TCATGCTTAGATCCTCGCAG 59 NA Drosophila melanogaster 61 Ste:CG33239 FBgn0053239 FBtr0300088 2 1 1 110 X 13951132 13951150 TCTGATACACAGCTGGACG 59 13950980 13951058 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15754 FBgn0030492 FBtr0073782 2 1 1 108 X 13422924 13422942 TGAGGGCTTCTATGTCCAG 58 13423014 13423102 CAGAAACTCAACTGGACGC 59 NA Drosophila melanogaster 61 CG15717 FBgn0030451 FBtr0073723 1 1 1 206 X 13023170 13023188 GATCACCAGCTACATGGTC 57 13023475 13023493 CTCTCCTGGAGTAGCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12716 FBgn0030439 FBtr0073752 2 1 1 117 X 12869514 12869597 GAAACAAGTCCTGAGAATCCTG 59 12869418 12869437 TGAAATTGAGGCGTTGAGTG 59 NA Drosophila melanogaster 61 CG32649 FBgn0052649 FBtr0073697 3 1 1 82 X 12793483 12793568 GTTTCGATCTGAGCTACGA 57 12793419 12793437 CTCAATCTCGAAGAGCTCG 57 NA Drosophila melanogaster 61 CG12717 FBgn0030420 FBtr0073704 3 1 1 60 X 12656751 12656771 CAAGAAACAGAAGAAGTGCCA 59 12656711 12656731 AGAACTAGCAGCTTGAATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2556 FBgn0030396 FBtr0073652 3 1 1 90 X 12409792 12409867 TAGGAATGGAAACGAGCAG 57 12409921 12409939 ATTGCTGATTCCATTGGCT 57 NA Drosophila melanogaster 61 CG15740 FBgn0030340 FBtr0073605 3 1 1 190 X 11739896 11740090 GTGAAGATGAATTTCTTTGGCG 58 11739727 11739745 TAGTTGCTCTCCTGGAAGC 59 NA Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 3 2 2 81 X 11616425 11616570 GAGAGGAGCGATTTAAGATCG 58 11616613 11616631 GTACGCTCTACAACTGTGC 58 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533 1 1 3 80 X 11572379 11572452 ATAAAGATCACGGAAAGAGCC 58 11572319 11572338 GAACAGAACCGTCGTAAAGG 59 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073455 3 1 2 299 X 11250239 11250257 TTTCCCTGGCTTAATCCCG 59 11250586 11250604 GAGTCGTCGGCTATTTCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 2 2 2 80 X 11126736 11126754 TCCAACCTTATACGCCCAC 59 11120101 11126693 TGAACAAAGTCCTCGAAGCT 59 NA Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299861 1 1 2 83 X 10930230 10931515 CTGTGGAGGAGTCTTTAGGC 59 10930166 10930184 TTCTTAACGGATCCGTGCT 59 NA Nonspecific Drosophila melanogaster 61 CG17333 FBgn0030239 FBtr0073379 1 1 1 83 X 10742266 10742403 CAGTGTCGTCAAGAGTGTG 58 10742450 10742468 AATGTCAACTGCCCTTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 3 2 2 72 X 10499259 10499375 CATAATGCCACAGAACAGC 57 10499205 10499223 GTACATCAGGTCGATCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 Hmr FBgn0001206 FBtr0071511 2 1 1 111 X 10486683 10486759 AGTTTCACATGCCAGAGGA 59 10486590 10486609 TACTTAAACGGACGCATCAG 58 NA Drosophila melanogaster 61 l(1)G0230 FBgn0028342 FBtr0071438 2 1 1 119 X 10107459 10107477 TCGATGTGCCTTCCTTCTC 59 10107634 10107652 AGAACTTGAGGGTCTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Yp2 FBgn0005391 FBtr0071424 2 1 1 84 X 9946439 9946457 AACCTGAAGGAGGTTACCC 58 9946305 9946392 ACAGATGGTAGAGCTTGTCC 59 NA Drosophila melanogaster 61 CG42657 FBgn0261522 FBtr0302457 1 1 1 129 X 9582790 9582874 TCTCATTGCAAAGGACAATGG 59 9582964 9582983 AAATCCAGACGACAAAGGTG 58 NA Drosophila melanogaster 61 Ogg1 FBgn0027864 FBtr0071223 3 1 1 81 X 8585512 8585535 CAAGAAGATTTACGAAGAGGTCTC 59 8585573 8585652 AAAGAGAATAGCTTGAGCCCA 59 NA Drosophila melanogaster 61 CG1632 FBgn0030027 FBtr0071170 3 1 1 80 X 8163822 8163840 AGAATGTGTCCATTGCGAC 58 8163884 8165985 AATACTCCTCTTGCGTGCA 59 NA Drosophila melanogaster 61 CG1632 FBgn0030027 FBtr0071170 1 1 1 80 X 8163821 8163840 GAGAATGTGTCCATTGCGAC 59 8163883 8165984 ATACTCCTCTTGCGTGCAG 59 NA Drosophila melanogaster 61 CG18262 FBgn0030012 FBtr0071158 2 1 1 60 X 8047233 8047252 AAACACTTCACGAACAGCTC 59 8047275 8047293 CAATGGGATCGCTTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071135 2 1 2 99 X 7795029 7795285 CAATATGAAGCTCAACGTTTCC 58 7794951 7794971 CATACGCTTCTCGTAGAAGAC 58 NA InUTR Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0301860,FBtr0071005 3 3 3 60 X 6893752 6893770 TGTGGACTTCTTCCTCGAC 59 6893791 6893812 AGTGAACTTCAAGACATCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 1 2 2 80 X 6575392 6575476 CATTCGGCTATTGTCTGATGG 59 6575518 6575536 GCAATATTCTCGCGGTTCG 59 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 3 3 3 101 X 6262082 6262570 CAGGAATCGGTTAAGTCTCAG 58 6262633 6262651 GAAGAATACCCTTTCGGCC 58 NA Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070903 3 1 2 124 X 6233624 6236116 AAATTCGACTAAAGCGGAAGAG 59 6236201 6236219 GGAATACTGTTCCTGGCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 3 2 2 82 X 6132165 6132183 CCAGATGACTATCAGGCGG 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 CG4020 FBgn0029821 FBtr0070824 2 1 1 82 X 5800637 5800658 TGGCGTACAACTATCAAATTGG 59 5800697 5800773 GGCTGAAAGTTACCATACTTGAG 59 NA Drosophila melanogaster 61 CG3016 FBgn0029819 FBtr0070828 2 1 1 109 X 5771718 5771736 AATCTTTACCGGCTTCTGG 57 5771569 5771645 GTGTAGTACCACCGATGTG 57 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 1 2 2 121 X 5604994 5605517 TATTTCTGATCGGCTATGCCT 59 5604893 5604911 CTTGTCCTCGTGACTCAGG 59 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300464 1 1 3 60 X 5536964 5536982 ATCCGAATCCAACCAGGTC 59 5536033 5536051 ACTCGTGTGATAGCCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 3 2 2 193 X 5511812 5511901 ATCACTTCAAGGTGCACAC 58 5511637 5511655 CAGATCCGTGCCAAATACG 59 NA Drosophila melanogaster 61 CanB FBgn0010014 FBtr0070764 1 1 1 82 X 5226853 5227097 TATTTATGAGCGTGCCAGTC 58 5227408 5227429 TTGGTTACTTAGTTCTCTGGTC 57 NA InUTR Drosophila melanogaster 61 snf FBgn0003449 FBtr0070748 3 1 1 133 X 5203724 5204168 GTACCGATGAGAAGAAGGAC 57 5204264 5204282 CATCATCTCGTTGGTCTCC 57 NA Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706 3 1 4 84 X 4582277 4582295 AGTTGTCGAGAAGTCAGGG 59 4582343 4585680 CTCCTTGGTAACGCTAAGC 58 NA InUTR Drosophila melanogaster 61 CG3546 FBgn0029716 FBtr0070679 2 1 1 60 X 4453860 4453878 TCTGGAATATCCTGGGTCG 58 4453902 4453920 GAGACAACAGTGGATTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHOp24 FBgn0029709 FBtr0070675 3 1 1 114 X 4435570 4435943 CAGGAGTACATGCATGTGC 59 4436021 4436039 CCACTGTCATCAGGACCAG 59 NA Drosophila melanogaster 61 CG12693 FBgn0029705 FBtr0070654 2 1 1 109 X 4221737 4221755 AACGATCAAATGTCGGTGG 58 4221583 4221664 CGGTACCTTATCTCCAGGT 57 NA Drosophila melanogaster 61 CG15579 FBgn0040906 FBtr0070657 3 1 1 78 X 4205674 4205693 ACGTATTCCATCGTCCACTC 59 4205615 4205633 ACCTCGTCAACAGTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12692 FBgn0029703 FBtr0070658 2 1 1 80 X 4195723 4195842 ATTTGTCCGGTGAATTGCT 58 4195661 4195680 CAGTCTCATCCAAGTGTAGG 57 NA Drosophila melanogaster 61 Klp3A FBgn0011606 FBtr0070448 3 1 1 80 X 2494438 2494456 AGACAGTGGTACTAAGCGA 57 2494293 2494396 TATCGGATTGAATCCTCTTGG 57 NA Drosophila melanogaster 61 CG14052 FBgn0029606 FBtr0070394 2 1 1 115 X 2117975 2117993 TGAGGCTCTCAATTGTGGT 59 2118326 2118344 TTTCTTGTGAATGGGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 Hr4 FBgn0023546 FBtr0100515 1 1 1 88 X 1896113 1896131 GATCACCATCATGTTCCGG 58 1896180 1896276 GTTCCACTTCTTTGTTTAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070302 3 1 2 82 X 1683700 1683768 TGTGGATGCAATTAGGCTG 58 1684199 1684222 CAAAGCATCTCTAGAGATCATCTC 58 NA Drosophila melanogaster 61 Mur2B FBgn0025390 FBtr0070284 2 1 1 80 X 1451792 1451955 TCGATTACAATAATCGCTGCTC 59 1451733 1451755 TACAGACATAGTAGTACTGCTGC 59 NA Drosophila melanogaster 61 CG11398 FBgn0040366 FBtr0070250 3 1 1 118 X 1109021 1109041 TGTCCTTAAACACAGAAGAGC 58 1108773 1108791 CTCCCTGGTGAGGAATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 2 1 1 82 X 1065651 1065669 CTAAGGTGGATCCTAGCCA 57 1065715 1065850 CTCGATGCTAACGTTCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14628 FBgn0040365 FBtr0070180 1 1 1 60 X 1040062 1040083 TACGATGATTACTCCGAAAGTG 58 1040101 1040122 CATTATACAGTTGCATGTCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)1Bi FBgn0001341 FBtr0070119 3 1 1 81 X 524664 524742 TCTCCTTTAAACAGCTACCCG 59 524784 524803 CTCAACGGCTTGTTTAGCTC 59 NA Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 3 2 2 92 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505983 506003 TGAAGTATTGGTTCCCTGTCC 59 NA Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070093 3 1 2 103 X 386658 386790 AAGGTGGACTAAATGGCCC 59 386573 386591 TTCGTCTTCGACTCAACGA 59 NA InUTR Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328,FBtr0070077 3 2 2 86 X 373901 373919 GATGGATCTCTGCGAGGAG 59 373966 374071 CGATTACCAAATAAAGTCACGC 58 NA Nonspecific Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979 1 1 3 186 X 149333 149351 TATGATCCCTTGGAGGACC 57 149853 149929 CAACATGTGTCGCTAATAGTC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CR40546 FBgn0085742 FBtr0114192 2 1 1 94 U 5728175 5728195 CGTCATCAATTTAGTGACGCA 59 5728251 5728269 ACGAGGTGATTGGCTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42418 FBgn0259849 FBtr0300146 3 1 1 62 U 7084341 7084360 AAGATCTACTGCCCACTCTG 58 7084298 7084317 TCCGTCCATCTGTCTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40625 FBgn0085503 FBtr0302234 1 1 1 80 U 5511406 5511488 AAGAATGGACCTACAGGGA 57 5511531 5511550 CCTGTGTTACAACAATCGAC 57 NA Nonspecific Drosophila melanogaster 61 CG11152 FBgn0039937 FBtr0089251 2 1 1 95 4 859687 864928 GCAGATAAATCGTCGAATTGGA 59 859613 859631 CACATATGTCAGAGTGCGC 59 NA InUTR Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 2 8 8 167 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 2 3 3 80 4 87361 87480 TACGGACAAGTACAGGTCG 58 87299 87319 TACCCATCTACAGTCTTTGCT 58 NA Drosophila melanogaster 61 JYalpha FBgn0040037 FBtr0299529 1 1 1 80 4 25146 25228 AAGAATGGACCTACAGGGA 57 25271 25290 CCTGTGTTACAACAATCGAC 57 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi18S-301 FBgn0083039 FBtr0113583 3 1 1 70 3R 16400695 16400713 AACTGTGTCGATTACCGTG 57 16400746 16400765 ACATGTCTGAGTCTTACGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-301 FBgn0083039 FBtr0113583 1 1 1 69 3R 16400695 16400713 AACTGTGTCGATTACCGTG 57 16400746 16400764 CATGTCTGAGTCTTACGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-1 FBgn0085056 FBtr0113492 2 1 1 60 3R 12591922 12591942 CATAAAGAACACAGGTATGGC 57 12591882 12591901 GATTTGTGTAACCGTGTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 3 2 4 82 3R 12570417 12571157 AAGCACATTATCACTTCCCA 57 12570354 12570372 TGGAACCACAAGTACAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG2135 FBgn0039874 FBtr0085858 1 1 1 80 3R 27595670 27595688 GATAGGTTCGGAAAGCCTG 58 27595554 27595626 AATAAAGGCGGGAAGTGAG 57 NA Drosophila melanogaster 61 CG18672 FBgn0040628 FBtr0085762 2 1 1 83 3R 27086484 27086712 ACGGTAAGCATTAGCTTGG 57 27086759 27086777 GTAACGACCCTTCAAACGG 58 NA Drosophila melanogaster 61 mRpL32 FBgn0039835 FBtr0085759 2 1 1 81 3R 27079011 27079085 GTTCTTTGTCCCTTCTGCT 57 27079130 27079148 CTAGACCGAGTGTCTCCTG 58 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 2 3 3 83 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043630 27043648 TCAATGGTCGCAAGTACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11313 FBgn0039798 FBtr0300700 3 1 1 81 3R 26556223 26556304 CGCAAAGGAGATGTAGTCTC 58 26556161 26556179 GTAGGCACCTTCCATTGAG 57 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089425,FBtr0089422,FBtr0089424 1 3 4 199 3R 26034370 26034648 GTCGACAAAGATGGCTATCG 58 26034126 26034144 TGGGCACGTAGATGATGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555,FBtr0300600 1 5 5 80 3R 25859251 25859328 CATGAGTCTAAGCGGACAC 58 25859371 25859390 TTGTTTGTCAACTTCCTCGA 57 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611,FBtr0085261 3 2 2 83 3R 23798695 23798713 TCATCTCGAAGATTCGCGA 59 23795537 23798648 CAGTGTCGGATACCTTGGG 59 NA Drosophila melanogaster 61 bigmax FBgn0039509 FBtr0085173 2 1 1 99 3R 23113570 23113590 GGCTATGAGAACATGCTACAG 58 23113426 23113509 CCATAATGGCCTGGAACAC 58 NA Drosophila melanogaster 61 spn-D FBgn0003482 FBtr0085116 2 1 1 92 3R 22992119 22992137 ATCCACTATGTGAGGTGCC 59 22992190 22992366 CAGCTTAATATCGGGATGATCG 59 NA Drosophila melanogaster 61 CG6296 FBgn0039470 FBtr0085078 2 1 1 95 3R 22830868 22830890 AGAATCCTAGTACAGGACAACAG 59 22830742 22830816 CGTGAATGGTGATTCTAGTTGG 59 NA Drosophila melanogaster 61 CG14237 FBgn0039428 FBtr0085013 2 1 1 98 3R 22282019 22282556 AAATACGGAGTCGACCTCC 58 22282618 22282636 ATCGCTAGGATTCGGAGTG 59 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 2 2 2 107 3R 22186367 22186386 TATACCGCATCTCTGATGGA 57 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 m4 FBgn0002629 FBtr0084980 1 1 1 60 3R 21850168 21850188 AACACCATGACCATCAAATCG 59 21850128 21850146 TCTGCAGCAGTTTCTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14540 FBgn0039398 FBtr0084948 3 1 1 116 3R 21786219 21786237 AGAACTTTCGCGATCTGAG 57 21786315 21786402 CACCGAAGTAAATTACCTTGC 57 NA Drosophila melanogaster 61 And FBgn0011273 FBtr0084904 1 1 2 127 3R 21638787 21638806 TCGTATGGATGATAAGCCAG 57 21638896 21638914 GTTAGACCGCAGAGAAGTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG4582 FBgn0039344 FBtr0084896 1 1 1 80 3R 21407986 21408204 CTTCAATCCCACCAGAATCC 58 21407925 21407943 TAAGCTGGCAATAGCTCGT 59 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 2 2 2 80 3R 21160215 21160238 CAGATATGTCACCAATCTGTATCG 59 21160103 21160179 TCTTCTTCATAATCCTCTCCGT 58 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113350 2 1 5 60 3R 21149599 21151173 TGTTTAAGATGTGCGTAGTCG 58 21149559 21149579 CAAGAATCACCGTGATTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10553 FBgn0039324 FBtr0084853 3 1 1 104 3R 21142518 21142595 GTGGATGGTCGTTCATCTG 58 21142432 21142450 AGCTACAGTCGTCATCACC 59 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 3 2 2 137 3R 21108535 21108620 AAGAAATTCTACGCTGCCC 58 21108720 21108739 ATTCCTATAGCAGGCATCCT 58 NA Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 3 2 2 154 3R 20954240 20954258 GAAACAACGGAAGAAACGC 58 20954375 20954465 TCTTGAGCATCCTTTACTGC 58 NA Drosophila melanogaster 61 CG11920 FBgn0039274 FBtr0084769 3 1 1 65 3R 20900826 20900844 GCTGAAATACGCGGATGAG 59 20901366 20901385 CATCCGGCATAGTGATACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0084762 2 1 3 111 3R 20875573 20875591 CGATCGTGTTGTTAGGCAG 59 20875665 20876918 ACGTTGACAACATTTACCCA 58 NA InUTR Drosophila melanogaster 61 niki FBgn0045980 FBtr0084737 2 1 1 95 3R 20649803 20649878 AACAAAGGGTACTCCTATGAGG 59 20649729 20649748 CATGGACACATTGCTGTAGG 59 NA Drosophila melanogaster 61 CG17784 FBgn0039192 FBtr0084626 1 1 1 80 3R 20190402 20190491 TTGTCAAGTTAGTACCTAGCCT 58 20190343 20190361 GCAAGTTGAAGAACCACCA 58 NA Drosophila melanogaster 61 CG33339 FBgn0053339 FBtr0084610 2 1 1 115 3R 20188585 20188665 AATTGTGCTGACAGTTCCC 58 20188741 20188762 GGAAGTCTAGAACATTGTAGGG 58 NA Drosophila melanogaster 61 CG5669 FBgn0039169 FBtr0084565 3 1 1 60 3R 20050915 20050934 CCCAATCTTCAGGCTTTACC 58 20050874 20050894 GAATGATTTGCACTTGACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 1 2 3 190 3R 19812924 19813001 CAGTAGCAGAAGACGATTAGAG 58 19813152 19813170 GTTGTAGTGGGAGTTGGAC 57 NA InUTR Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 1 5 5 80 3R 19792355 19792373 AAGCCAACATACTGTCACC 57 19792417 19798180 AAAGTTGCAAACTTCGCAG 57 NA Drosophila melanogaster 61 CG31148 FBgn0051148 FBtr0084441 3 1 1 111 3R 19526429 19526499 TATCAGCAATTGGTGGCCA 59 19526571 19526592 ACGGGATTCTCCAGATAATCAC 59 NA Drosophila melanogaster 61 CG6733 FBgn0039052 FBtr0084352 3 1 1 80 3R 18923558 18923635 AGATGTTGACTATACTGCCTG 57 18923675 18923695 GGATAAACCACTTCAACAGGA 58 NA Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 2 2 2 81 3R 18881433 18881519 CAAAGAGATTGTGAAGGATGTG 57 18881373 18881391 GCCAAAGATGATGGAGGTG 58 NA Drosophila melanogaster 61 lmd FBgn0039039 FBtr0084364 2 1 1 90 3R 18849545 18849563 TGGCTGCCAGTATAAAGGT 58 18848193 18849493 ATACGGTTTCGTATCGTAGTG 57 NA Drosophila melanogaster 61 Dcr-1 FBgn0039016 FBtr0084324 3 1 1 80 3R 18560350 18560369 TTAACGATGTGATTGACCGT 57 18560226 18560310 CGGACAATAAGTAGTACTCCTC 57 NA Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084290 2 1 2 130 3R 18317067 18317149 CGAAGTCTTAAATCGCGGA 58 18316718 18316736 GTTCGATATGGACAGAGCG 58 NA InUTR Drosophila melanogaster 61 CG13856 FBgn0038959 FBtr0084224 2 1 1 155 3R 18228618 18228639 GGCAATAAATTGTACAATCGGC 59 18230217 18230235 AATAGGGTCGAGATGCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5386 FBgn0038945 FBtr0084240 1 1 1 88 3R 18167910 18167928 AAATTGGCTCGTTCTGCTC 58 18167749 18167858 TGTTGTGGTGCTTTGTCAG 58 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300008,FBtr0300006 2 3 3 95 3R 17956085 17956104 ACCTGAAGGGAGATCTACAG 58 17956159 17956238 CATAGATGGCATTATCACACTG 57 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 3 2 2 88 3R 17566286 17566306 CTCTACACGGCTATTATGGCA 59 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084054,FBtr0084053 2 2 2 60 3R 17084706 17084725 CATAGTCATCATGCTGCTGG 58 17085195 17085213 CTTCACAATCACGATGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 1 2 2 80 3R 16965291 16965420 GGTATTTACAGGTGAGGCCA 59 16965461 16965481 GCTATCAGCGATAAATGGGTC 59 NA Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 1 2 2 80 3R 16940760 16940778 TTCATAGAAACCTCGGCCC 59 16940819 16940989 CACAATGCGATAGATCTCTGTG 59 NA Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 3 2 2 82 3R 16479501 16479522 CTGCATTATTGCCCAATATAGC 58 16479278 16479459 TATTCTCACCCTGCGTACTC 59 NA Drosophila melanogaster 61 CG5466 FBgn0038815 FBtr0083913 1 1 1 123 3R 16445342 16445593 CTCCTTGCGTTCCAATCTG 58 16445680 16445698 TATCTTGTCCTGACCCACG 58 NA Drosophila melanogaster 61 Srp72 FBgn0038810 FBtr0083911 3 1 1 155 3R 16416346 16416364 GAACTACAACGCCGAAGTG 59 16416482 16416559 GACATGTCGTATTGATCGGC 59 NA Drosophila melanogaster 61 Elongin-B FBgn0023212 FBtr0083947 1 1 1 80 3R 16404508 16404648 GCTTGACATTCAGGAACGAG 59 16404447 16404465 CTTCGGGTAAGTCTGGTGG 59 NA Drosophila melanogaster 61 CG10881 FBgn0038796 FBtr0083885 3 1 1 60 3R 16234092 16234110 ACTATGTGGATGGACTGCC 59 16234134 16234152 GTCACGTACTTGAAGTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 2 3 3 85 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 CG4770 FBgn0038751 FBtr0083822 2 1 1 80 3R 15744673 15744693 TTAAATGAGTCCGACAGATCG 58 15744733 15744815 CTCATTGAATCGTACTGTTGC 57 NA Drosophila melanogaster 61 CG7718 FBgn0038649 FBtr0083682 2 1 1 175 3R 14570595 14570613 CATTCATCACGACAGCGTG 59 14570380 14570456 GAAAGCCGTTTGCATTTGG 58 NA Drosophila melanogaster 61 CG7146 FBgn0038593 FBtr0083601 1 1 1 81 3R 14098801 14098874 TTGAGCTGACGCAAATCTC 58 14098738 14098757 TCTTTCGCATAGAGCATGTG 58 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0300246 2 1 6 112 3R 14079172 14081052 GCAGTTTCCCAAAGAGTTCG 59 14079079 14079097 AGAACTCTTGCTCCTCGTC 59 NA Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 2 1 1 180 3R 14046066 14046273 AGCATAATATTGTGGACAGTCC 58 14045907 14045928 GGAAAGATTCACACTAATAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Arp5 FBgn0038576 FBtr0083557 1 1 1 79 3R 14011979 14011997 ATCCTACGGCATAGATGCG 59 14012098 14012116 AAATGATCAGGGCATCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 3 2 7 261 3R 14000711 14000729 TCTATTCTACACGCCACCC 58 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 htl FBgn0010389 FBtr0083548 2 1 3 80 3R 13874284 13878233 ACTTTGTGAGGTGTTGCAG 58 13874222 13874243 TTCCATAGATCATTCGATGGCT 59 NA InUTR Drosophila melanogaster 61 CG14330 FBgn0038512 FBtr0083443 1 1 1 60 3R 13282270 13282290 GACTCTTCTACGAGATACCGC 59 13282230 13282248 TAGCATTTCCGACGTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17283 FBgn0038505 FBtr0083437 3 1 1 60 3R 13233627 13233646 GTGTGCATTCATATGCCTCC 59 13233667 13233687 ATGGTTAACTTTCCTCTGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 2 2 2 80 3R 13216263 13216281 TATGAGCTTGGTCGTACCT 57 13202972 13216221 GATGTATAAACACGGGTCCAG 58 NA Drosophila melanogaster 61 CG18622 FBgn0038460 FBtr0083377 1 1 1 95 3R 12809813 12810307 GAATGACTGGATCAGTGCAC 59 12809737 12809755 CTTTCGACTCCGGAGAGTC 59 NA InUTR Drosophila melanogaster 61 CG12783 FBgn0038448 FBtr0089666 3 1 1 91 3R 12437908 12437926 CGAATGGCATGACCTTCTG 59 12437765 12437853 GTCACTACAGACCACGTCC 59 NA Drosophila melanogaster 61 CSN5 FBgn0027053 FBtr0083292 1 1 1 102 3R 12296150 12296224 GACAACACAATGATTGTCATGG 58 12296287 12296305 TGTAGGCGGTCATGTACTC 58 NA Drosophila melanogaster 61 bor FBgn0040237 FBtr0083276 1 1 1 92 3R 12087640 12087722 TAAGCAGAAGATGGCCTGG 59 12087566 12087584 TTTGCAGTTAGGGTGAGGG 59 NA Drosophila melanogaster 61 CG5916 FBgn0038401 FBtr0083251 1 1 1 86 3R 11973383 11973474 CAAAGTTCAGCGATGTGGAC 59 11973519 11973541 GGTAACCATCCATGAACTTTGAG 59 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152,FBtr0083153 2 2 2 158 3R 11367168 11367186 ATTGAGACGGATCACCTGC 59 11366597 11367046 TGTGCCATTATTTCGCACC 59 NA Drosophila melanogaster 61 CG6194 FBgn0038325 FBtr0083115 2 1 1 82 3R 11181062 11181150 TTTGCTTAAACACGCCTTAGAG 59 11181001 11181022 TGCAATCTTTGGCTACATAGAC 58 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 2 2 2 81 3R 11151702 11151723 CTGCCCAAAGTATTGTAAATGC 58 11151565 11151660 ACACGGTGAATCTCCAGAG 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083059 1 1 6 122 3R 11069009 11070095 CGTAATTGATGTCTAAAGCTCC 57 11070178 11070196 GAGTGGTACGATTACCCTG 57 NA InUTR Drosophila melanogaster 61 CG4203 FBgn0038300 FBtr0083048 2 1 1 76 3R 11036384 11036402 TTCTACTACGTCCAGGGAC 57 11036500 11036518 AGAGTTTCACGCAGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959,FBtr0112893,FBtr0082958 3 3 3 169 3R 10430160 10430178 AACACGAGTGGATCGAGTG 59 10430309 10430417 AAATTGAATGGTTTCCGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 soti FBgn0038225 FBtr0082940 1 1 1 60 3R 10207150 10207168 TGACTTGGACACATTGGAG 57 10207108 10207126 CATCTGACGATTGACTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spn-B FBgn0003480 FBtr0082933 2 1 1 81 3R 10154606 10154677 ATTGAGGCAGAACCTCTCC 59 10154721 10154740 TAATGATCAGGCCAATGCCA 59 NA Drosophila melanogaster 61 CG9624 FBgn0038213 FBtr0082897 3 1 1 60 3R 10054672 10054690 GGACGAATTCTTTGTGCCC 59 10054630 10054651 GGACAGATAGATATGCCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14358 FBgn0038199 FBtr0113232 3 1 1 91 3R 9919024 9922329 CTCTCGTGACAGGTTCCTG 59 9918862 9918881 TTTAGCATCTATGACCGCCT 59 NA Drosophila melanogaster 61 CG42375 FBgn0259721 FBtr0299976 1 1 1 74 3R 9605477 9605495 TTGATCGAGGAACTCCAGG 58 9605588 9605606 GTCAATGGAGTTGCACACG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0082846,FBtr0112939,FBtr0082847,FBtr0112938 3 5 5 104 3R 9523180 9523256 TTAACATGCGCTCTTTGCA 58 9523094 9523113 GCTGCAGATAAAGGCAATCC 59 NA Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 1 2 2 80 3R 8866924 8866942 TCCCTGTCATCTGTTGTCC 59 8866806 8866883 CATTGTACTCCTGACATTTGGT 58 NA Drosophila melanogaster 61 CG6234 FBgn0038071 FBtr0082648 1 1 1 80 3R 8476860 8476938 ATGAAATTAAGCTTGCGGTCC 59 8476976 8476998 CTTCATCGATTGTCTTTGACTCC 59 NA Drosophila melanogaster 61 CG5844 FBgn0038049 FBtr0082591 2 1 1 249 3R 8260915 8260992 TTCAACCAGACCTTCAAGC 58 8261205 8261223 CGTTTGGCTTATCCTTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 Pros25 FBgn0086134 FBtr0082590 2 1 1 82 3R 8257372 8257476 GGGCATTATAGCTTCCAACG 59 8257521 8257539 GATGTACACTGTGCTGCTC 58 NA Drosophila melanogaster 61 lig3 FBgn0038035 FBtr0082600 3 1 1 80 3R 8224927 8225010 GACCTAGAGAAGCTTAGAACG 57 8224867 8224886 AGTATCGAGACAGCTTTGGA 58 NA Drosophila melanogaster 61 CG4848 FBgn0037998 FBtr0082624 2 1 1 76 3R 8043361 8043379 AGAGAAACTGCCAAAGGTC 57 8043244 8043262 GTTCCAGTGTCAAGGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 mthl5 FBgn0037960 FBtr0082515 3 1 1 80 3R 7711182 7711200 ATTCGTCATCGGGATTCCA 58 7711057 7711139 ACTAGCTTATCAGAGCTGCC 59 NA Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300580,FBtr0300581 1 2 2 100 3R 7452266 7452284 TGCTCTAGATCAGATGCCC 58 7452124 7452202 TTCTTGCAGCTTAGCTCCA 59 NA Nonspecific Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082453,FBtr0082454 3 2 6 106 3R 7418336 7419051 TTTCATTGGTGATGCACCA 58 7418248 7418266 TCTTCATGTGGTTCTTGCC 58 NA Drosophila melanogaster 61 CG5342 FBgn0037916 FBtr0301159 1 1 1 62 3R 7405306 7405327 CTATTCACTTCTAATCTTGGCG 57 7405400 7405418 GGATTCAACTGCCAGACTG 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Dh FBgn0040252 FBtr0082340 1 1 1 84 3R 7001529 7001548 TGCCCAAATTGGATATGCTG 59 7001945 7001963 AAGAATTGAGCCTCCGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14694 FBgn0037845 FBtr0082298 3 1 1 81 3R 6685244 6685326 ACCTGCTCAGATACAAGCC 59 6685181 6685199 GTGGTCGTCCAAATCAGTG 58 NA Drosophila melanogaster 61 mRpL37 FBgn0261380 FBtr0302273 2 1 1 80 3R 6608745 6608820 AAGAACTTGTATCCTTTGCGC 59 6608685 6608706 GACTTGGTGTTTGTTAAACACC 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082308 2 1 4 93 3R 6599735 6602911 CTACGCAGTTACGACTCCA 59 6599660 6599680 CTTCGAGGTGTACGAGTAGTC 59 NA Drosophila melanogaster 61 tomboy20 FBgn0037828 FBtr0082316 1 1 1 60 3R 6561362 6561382 GTCGAAGTGTACTTCATGACC 58 6561322 6561340 CATCGCCGTTTGTGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp12e1 FBgn0037817 FBtr0301283 2 1 1 102 3R 6261646 6261664 TTTGGAAACTAGCCTGCTG 58 6261729 6261806 TACAAGAGTAGGATCCGCTC 58 NA Drosophila melanogaster 61 CG34302 FBgn0085331 FBtr0301078 2 1 1 99 3R 5650463 5650581 ATCTAACCTCAAGCGAAGC 57 5650382 5650402 CTTGTTAAGCTCGTTGTTCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8507 FBgn0037756 FBtr0082140 3 1 1 80 3R 5617713 5617732 TCATGAGCAGCTACGATCTG 59 5617774 5617855 CGTGGAATTTCTTGTAGGGC 59 NA Drosophila melanogaster 61 CG16817 FBgn0037728 FBtr0082082 1 1 1 98 3R 5504359 5504450 CATCGAACACAAAGTTACGGA 59 5504510 5504528 TCGTGGAGGAAGTTCAGTG 59 NA Drosophila melanogaster 61 CG8319 FBgn0037722 FBtr0082077 3 1 1 108 3R 5453535 5453553 CTGGCAGACAGCTAAGGAG 59 5453624 5453704 TTGCTGTGAACCTTCATGTG 59 NA Drosophila melanogaster 61 CG8135 FBgn0037689 FBtr0082030 3 1 1 87 3R 5232775 5232853 ATTCCCAACCGCATTATGG 58 5232903 5232922 AGATATTGAAGCCGTTCGAG 57 NA Nonspecific Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051,FBtr0082052,FBtr0082054 3 4 4 83 3R 5194233 5194251 GGAGATCTTCTCCAAGGGC 59 5194105 5194189 ATACGATATCCCGTATCGATGC 59 NA Drosophila melanogaster 61 Mst85C FBgn0028708 FBtr0081969 2 1 1 173 3R 4876707 4876725 TCATTCCCATTCAATGCGC 59 4876920 4876939 CCTCTCCTCGGTTATAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 hb FBgn0001180 FBtr0081951 2 1 2 162 3R 4520189 4520207 CAATCATACGCACTGAGCG 59 4519762 4519782 TATTCCCGTCGAGATGATGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9684 FBgn0037583 FBtr0081853 3 1 1 84 3R 4187679 4187700 CCAGTAATCGTTGCTATATTCG 57 4187390 4187637 GCTATGGTATTAACCTTCTTGC 57 NA Drosophila melanogaster 61 CG31463 FBgn0051463 FBtr0081831 1 1 1 60 3R 4118456 4118476 CGACTTCACACCAAATCAGAG 59 4118495 4118516 AACATCCTGAATAATCTCCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheA84a FBgn0261290 FBtr0091780 3 1 1 156 3R 4030429 4030501 AAACTTGCGCATTGATTCC 57 4030291 4030312 GATTCATTATCCAGATCCTCCT 57 NA Drosophila melanogaster 61 CG7910 FBgn0037547 FBtr0081790 2 1 1 86 3R 3914738 3914756 CGATTCAACGGCCTTATGG 59 3914803 3914879 AAGCAATTGATTCAGATGGCTC 59 NA Drosophila melanogaster 61 CG18746 FBgn0042103 FBtr0081775 3 1 1 80 3R 3615502 3615522 GAATCATTCAACGGACATGTG 58 3615379 3615461 AATAAGCACCTCTATGCTGG 57 NA Drosophila melanogaster 61 CG31146 FBgn0051146 FBtr0081541 3 1 1 80 3R 3501116 3501136 ATTGCGCTTCTATATGCAGAG 58 3501176 3512167 ATGTCCTGGTATTTCTTCAGC 58 NA Drosophila melanogaster 61 CG1142 FBgn0037504 FBtr0081559 1 1 1 82 3R 3299032 3299050 ATCCAGGACTAGAACAGGC 58 3298555 3298986 CTTTGAGCGTTCAGCTCTG 59 NA Drosophila melanogaster 61 CG42650 FBgn0261502 FBtr0302394 1 1 1 92 3R 3217613 3217634 ACCAGCTGAAGAATGAAATCTC 58 3217681 3217757 GAGTAGTGTAAGACATCACTTTCAC 59 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081635 3 1 3 81 3R 2900625 2900643 TCCGCATCTCTTATTCGCA 59 2900687 2902622 GGTTTCAGTGACTTGGAAGG 58 NA InUTR Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081620 3 1 3 152 3R 2589214 2589565 CAACATCCTACCAGACATGG 58 2589679 2589698 CAGTTGAACTCCACAGAGTC 58 NA InUTR Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081620 1 1 3 150 3R 2589215 2589566 AACATCCTACCAGACATGGC 59 2589678 2589697 AGTTGAACTCCACAGAGTCG 59 NA InUTR Drosophila melanogaster 61 dpr11 FBgn0053202 FBtr0081704 3 1 1 119 3R 2358447 2358465 TTCATCATGTGGTACCACG 57 2357762 2358364 TAATGAGCCAATCGTGCTC 58 NA Drosophila melanogaster 61 Osi5 FBgn0037413 FBtr0078595 2 1 1 81 3R 2053733 2054176 GTCCCAAGTTTCAGAAGCC 58 2054219 2054239 CATCATCTTGCCAAACATCAG 58 NA Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0112922 2 1 2 80 3R 1919998 1920016 ACAGTGTTCAAGATTGGCG 58 1915403 1919954 ATAGTAATCCTCGCACCCG 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 1 3 3 80 3R 1392050 1392070 GGAAACTCTAATGCGAAGCTC 59 1392107 1392198 CTCCAACTTGAAGAAGGTAATGAC 59 NA Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 3 2 2 83 3R 1369008 1369097 CCAGATACGGGCTTTATTGG 58 1368944 1368964 CGTACCTAGGAATCCTTTCAC 58 NA Drosophila melanogaster 61 Prosbeta2R2 FBgn0037296 FBtr0078831 3 1 1 80 3R 1045114 1045132 GAAATACCCAGACCGATCG 57 1044658 1045071 TTTAGTTGTTTGTTGCGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG14661 FBgn0037288 FBtr0078848 2 1 1 82 3R 779986 780065 CAATATGCCTGACTATATCCAGG 58 779926 779944 GCAAGTTGTGAACACTGCT 59 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 1 4 4 88 3R 293415 293433 TCTACTACATGATCGCCGC 59 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0111222,FBtr0078978 2 2 2 60 3R 93725 93744 CAGTGGGATATACGATCAGG 57 93767 93785 ACGCTTGTTGTCAAGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31516 FBgn0051516 FBtr0078987 2 1 1 60 3R 44880 44899 ATGCAGATATGTCTGTCGGT 59 44839 44857 AGCGGTACTCGAAGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 3 2 2 81 3R 52168 52259 GGATTATGGAATGGACTGATGG 58 52301 52319 GCATTGTCCCACAACACTG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-A576 FBgn0086080 FBtr0114356 3 1 1 62 3L 17559217 17559236 TTTAATTGGAACAGCAACGG 57 17559174 17559195 GCTTCAATCACCAGAATAATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111144 3 1 3 62 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24531016 24531037 TACGAAGGGTCATTATTACTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG40298 FBgn0058298 FBtr0111169 1 1 1 60 3L 23720611 23720632 TGTCAACTTCTTACAGGATCAG 57 23720651 23720671 AAGATTATCCACAGTAGCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11131 FBgn0037204 FBtr0078558 2 1 1 150 3L 22892367 22892525 AATGAAACTCTTCACCGCC 58 22892639 22892657 ATATCCGTTCTCCGAAAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 3 3 3 80 3L 21830924 21830942 GACCATGAAACTGGTGCAC 59 21830809 21830881 CACTTGACGAAATCCTCGTC 59 NA Drosophila melanogaster 61 CG14567 FBgn0037126 FBtr0078454 3 1 1 60 3L 21731322 21731343 TAAGTCAGAAGGACAAGTACCA 58 21731283 21731302 ACTCCGGTGATATTCTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7172 FBgn0037102 FBtr0078377 2 1 1 60 3L 21561740 21561760 TGTGCTCCTTAACAAATTGCC 59 21561700 21561721 CTTCTCGGTCAAATGAATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089798 1 1 3 102 3L 21521995 21522073 ACTTTAAGCTCTACTGGAAGGT 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 CG33214 FBgn0053214 FBtr0078388 3 1 1 87 3L 21497149 21497167 CCTGTGGAAAGAACATCGA 57 21494017 21497098 CAGTGAATCACCTTTCCGT 57 NA Drosophila melanogaster 61 CG32440 FBgn0052440 FBtr0078345 3 1 1 100 3L 21353539 21353557 GAGAGTGACTTCGCTCTGG 59 21353621 21354057 TGATAGACGTTGGTGTCCG 59 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089462 2 1 3 100 3L 21171018 21171036 ATAATATACGCCGCTCCGA 58 21171254 21171272 GGATAAAGCCATCCAGGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 1 3 3 80 3L 20989472 20989493 TTTCTAACATTCGAGGAAGAGG 58 20989354 20989431 GTCCATATGAGTGTCCCAG 57 NA Drosophila melanogaster 61 CG4042 FBgn0037018 FBtr0078279 1 1 1 60 3L 20763386 20763406 TGAATGATCCAAAGGAGACCC 59 20763346 20763365 ATGGCCTCCTCTAACATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rcd2 FBgn0037012 FBtr0078213 2 1 1 80 3L 20522850 20532012 TTCTACAATCGTGTGCTATGC 58 20522790 20522808 AGTCATTCTCACACGGTGG 59 NA Drosophila melanogaster 61 CG6020 FBgn0037001 FBtr0078201 2 1 1 116 3L 20489519 20489537 AGAGAAGACCGTCAAGCAG 59 20489617 20489703 TAGCGTTTAGGTCCCACAG 59 NA Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 1 2 2 60 3L 20420593 20420614 GGATAATTATCCAACTTGTGCG 58 20420502 20420573 GCTGGCAATCAATGTTTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 Clc FBgn0024814 FBtr0300813 3 1 3 136 3L 20234198 20235896 TGGGTTAATAGAGCACATAGC 57 20235994 20236012 CAGATCCACCCGTAATCTC 57 NA InUTR Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 2 3 3 95 3L 19992456 19992474 CATAGCTCCGAAAGGACTC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 kto FBgn0001324 FBtr0074884 1 1 1 80 3L 19835643 19835662 TTACTATGAACCGTTGCCAC 58 19835702 19835794 GCCTTCATTTCATCCTTTATGC 58 NA Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 3 2 2 81 3L 19799485 19799505 GTCAAGTGAACAGTGAAAGCA 59 19799548 19799623 CGTATGCTTTCTTGCCTGG 59 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075028 1 1 4 140 3L 19153780 19163565 GTGACAATCAATCCTGGGC 58 19139513 19139531 GTTTCCTTCCAGACACAGC 58 NA InUTR Drosophila melanogaster 61 CG7271 FBgn0036791 FBtr0075101 2 1 1 69 3L 18581990 18582008 TTACCGACGAAGAGACCAC 59 18582041 18582059 GCACATTCGTGTAACTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34002 FBgn0054002 FBtr0302155 2 1 1 80 3L 17852831 17852851 CTGAACGCATGGTATGATCAG 59 17852891 17852983 AATCTCCTTCTTAGCTGTGGA 58 NA Drosophila melanogaster 61 CG32181 FBgn0052181 FBtr0301018 1 1 1 80 3L 17754352 17754470 TCAAACGAAGTACGAAACCA 57 17754512 17754531 GGTTTACATCTAGCGTTTCG 57 NA Drosophila melanogaster 61 CG32185 FBgn0052185 FBtr0075174 3 1 1 60 3L 17487996 17488015 CCAACAAGTGCGGAATACTG 59 17488037 17488056 TAGGAGGCCACTATTGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tap FBgn0015550 FBtr0075216 3 1 1 60 3L 17353490 17353509 CACAACTACATCTTTGCCCT 58 17353530 17353550 GATCCAGGTTGATTGAACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 2 3 10 85 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922045 16922128 CAATCGAAAGACCCACTGG 58 NA Drosophila melanogaster 61 CG4842 FBgn0036620 FBtr0075384 3 1 1 84 3L 16361575 16361593 AATGTCGTTTACCTTGGCG 58 16361640 16361717 TGGCTAGAGCCTTTATTGGT 58 NA Drosophila melanogaster 61 CG4933 FBgn0036615 FBtr0075381 2 1 1 99 3L 16346008 16346086 CAAATGAGGTCCTTATAGTTGGAG 59 16346144 16346162 GTGGCAAAGAGTTTGCCTC 59 NA Drosophila melanogaster 61 CG5389 FBgn0036568 FBtr0075446 1 1 1 81 3L 16091023 16091104 AAATGGCTACAGCATGTGC 59 16091147 16091167 GGATTACCAAGATAGTTGCCC 58 NA Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299850 1 1 2 96 3L 15640344 15640362 TAAATCAGGCGGAACAAGG 57 15607089 15607107 ATCTCGATCGTGGGATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 2 4 4 81 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593967 15594347 CCAAAGAATGTTGCAATGCG 59 NA Drosophila melanogaster 61 gdl FBgn0001099 FBtr0091757 2 1 1 61 3L 15503331 15503724 GGTTAATGACCAACAATCCAC 57 15503747 15503765 TCTCGGTGACATAGAAGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7276 FBgn0036499 FBtr0075546 2 1 1 60 3L 15491422 15491440 GATCCGAGGTAATGTCCCA 58 15491463 15491482 TTATCCTCATTCCCAGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 2 2 2 233 3L 14742834 14744382 AGGCAATTTAAATCAGGGCA 58 14742620 14742638 CTCAATTGAGTTGCTGCTG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 l(3)70Da FBgn0013563 FBtr0075777 2 1 1 80 3L 14067858 14067940 TATGTGGCCATCAAGGTATCC 59 14067979 14068000 GGTGGCCCATATAGAAGTACTC 59 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075761 2 1 3 107 3L 13967867 13968826 CGATCTTTGTCTCAGGGTC 57 13968895 13968915 GGGATATTATGTGGCATTGTG 57 NA InUTR Drosophila melanogaster 61 CG8750 FBgn0040812 FBtr0075802 3 1 1 65 3L 13835949 13835967 CAAGATGCCTGTGTCAGAG 58 13835902 13835920 ATCCTTCCAGTCGTTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10083 FBgn0036372 FBtr0075819 2 1 1 91 3L 13477335 13477418 GGAATGCATTAACGGATTTGG 58 13477264 13477282 ATCGTATAGAGCTCGTGCC 59 NA Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0301405 2 1 3 85 3L 13375928 13376024 CATCGTAGTAGCAGCTCTG 57 13376073 13376091 CATAGTGATGATCGGAGCC 57 NA Drosophila melanogaster 61 Klc FBgn0010235 FBtr0075951 2 1 1 80 3L 12740048 12740068 CACAATTGCTAACGTCAAACG 59 12739921 12740007 TCGCATTCTTCTCCTCAGAG 59 NA Drosophila melanogaster 61 CG32105 FBgn0052105 FBtr0075953 3 1 1 81 3L 12328172 12328266 CTTCTCACCGGATGACTATCC 59 12328309 12328327 GTCAAAGTTGCTCCCATCC 58 NA Drosophila melanogaster 61 CG9760 FBgn0036259 FBtr0273438 3 1 1 85 3L 12151410 12152258 TCTTCTTCACGGTAACCGAG 59 12151344 12151362 GACTTTCTTTGGCGTGACC 59 NA Drosophila melanogaster 61 eap FBgn0052099 FBtr0076000 2 1 1 60 3L 12142572 12142590 GCTCGGCTTATGAAGTTCC 58 12142614 12142632 AAAGACGACCAATTAGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6931 FBgn0036236 FBtr0076048 2 1 1 83 3L 11983886 11983904 ATGAACAAGAAGCTCTCGC 58 11983951 11984030 CCTTGGCACATTGGATAGC 59 NA Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075,FBtr0076076 3 2 2 80 3L 11821335 11821355 CTTACGTCTTCATCAACACCT 58 11821205 11821294 ACTCGGAAATATACAGCGTC 57 NA Drosophila melanogaster 61 Klp68D FBgn0004381 FBtr0076030 3 1 1 80 3L 11789704 11789831 GAATGAGCATAGTTCAAGATCCC 59 11789869 11789889 ACTTTGATGGTGTTCGTTTCC 59 NA Drosophila melanogaster 61 CG7543 FBgn0036164 FBtr0076092 1 1 1 84 3L 11474111 11475773 GGAAGCCCTATAACTATAGCAC 58 11475818 11475836 CTGTCACTACCCACAACCT 59 NA Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359,FBtr0076090 3 2 2 60 3L 11466708 11466726 CATTGCGATCTATGGCCTG 58 11466748 11466768 ATACGAATCCGACAGAGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7616 FBgn0036142 FBtr0076161 2 1 1 80 3L 11164743 11164762 GCCAGGAATAATTTCGAGCA 58 11164805 11164889 GTTCAGATTACGCACCACG 59 NA Drosophila melanogaster 61 CG42575 FBgn0260795 FBtr0301438 1 1 1 88 3L 11122973 11123066 TTTGATTGGCTACAAGGTATCG 58 11123115 11123133 CCAGCATCAGAACCTCCTC 59 NA Drosophila melanogaster 61 CG12523 FBgn0036102 FBtr0076266 3 1 1 72 3L 10794671 10794689 CAAGATCATCTCGCAGCAG 58 10794724 10794743 ATATCCTCCAGACGAACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33493 FBgn0053493 FBtr0089606 3 1 1 73 3L 10685989 10686007 ACACATGGAACACAATCGG 58 10685934 10685957 GTCTTATAGTCATGGTGTAGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 1 2 2 93 3L 10640035 10640053 GAATCCGACACAGCATCTG 58 10634892 10639983 CATCTTGTACTCATCGAACTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 2 2 4 180 3L 9707709 9708848 ATTTGTGCGAAGAAGCAGTG 59 9708990 9709009 GTCTTCTCAGTCGATGTGGT 59 NA Drosophila melanogaster 61 CG16719 FBgn0036029 FBtr0076394 2 1 1 60 3L 9678906 9678924 CGAGTACGAACACTATGCC 58 9678946 9678966 ATTGATGTAGCGTGACTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3448 FBgn0035996 FBtr0076476 3 1 1 60 3L 9444283 9444303 GATACGAAACGCTGTACTTGG 59 9444243 9444261 AGCATCTGGTAGCAGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nf-YA FBgn0035993 FBtr0076504 1 1 1 93 3L 9435061 9435237 ACGCCAAGAAAGTGTAAGTG 58 9434987 9435005 TTCCATTGCCTGATTGCAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 1 5 5 124 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 Doc3 FBgn0035954 FBtr0076521 2 1 1 90 3L 8999389 8999478 CTTATCAGAATGACCGCATAACC 59 8999528 8999546 CGTTTGCATCTCGACTGAC 59 NA Drosophila melanogaster 61 Cpr66D FBgn0052029 FBtr0076567 2 1 1 89 3L 8633936 8634028 GATTATCAGCAATATCAGCCTCAG 59 8634076 8634094 GGAGGACTGCTGAATCCTG 59 NA Drosophila melanogaster 61 CG13671 FBgn0035867 FBtr0076706 2 1 1 60 3L 8294536 8294556 GTGGTGATCTTCGATTCTGTG 59 8294578 8294596 TTTGCTGAATGCCAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7207 FBgn0027569 FBtr0076717 2 1 1 81 3L 8282319 8282342 CTACTATAAATCCGAATCGGAGTC 58 8281312 8282279 CTCATGGGCCTTAATGGTG 58 NA Drosophila melanogaster 61 CG7457 FBgn0035812 FBtr0076814 1 1 1 80 3L 7719111 7719192 TTACCTGAAGATTGCGAAACG 59 7719051 7719069 AGAAGATGAACACGTCCCA 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112693 3 1 15 126 3L 7657020 7657038 GTGGTCGCAGTTTCAACAG 59 7656409 7656931 CTTTCGTGAAGGGTTTCTCC 58 NA Drosophila melanogaster 61 CG8539 FBgn0035791 FBtr0076831 1 1 1 80 3L 7491071 7491092 CAAACGGGCTGTAATGTATCTC 59 7490929 7491032 ACTGGATCTGTATCGTAGACC 58 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 1 2 3 82 3L 7460745 7460830 CGAAATACGCATTTATGCCA 57 7460875 7460893 GGTACTGTTGTGCAAACAG 57 NA Nonspecific Drosophila melanogaster 61 CG14830 FBgn0035755 FBtr0076888 3 1 1 86 3L 7244836 7244854 CTATGACCAGGCTGGTGAC 59 7244707 7244787 TGACTGTAGCGACTGATCTC 59 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 3 3 3 83 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088584 AAAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 2 2 6 134 3L 5764463 5764727 TGCGAACAGACAATAACGG 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 mthl2 FBgn0035623 FBtr0077088 2 1 1 80 3L 5598898 5598919 TTTCGGATACCTGTTCCTACTC 59 5598958 5599038 AAGTATCCCAAGAAACCTGCT 59 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077132,FBtr0077131 1 3 3 156 3L 5562089 5562227 AACAACAAGAAATCCCGCA 58 5561951 5561969 AGAAGATCGAGATCCGCTC 58 NA Nonspecific Drosophila melanogaster 61 Rh50 FBgn0028699 FBtr0073354 2 1 1 108 3L 4910855 4912682 ATATCCGCAGTTCCAGGAC 59 4912754 4912772 CATGAACAGGGTGAATCCG 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0112845,FBtr0073152,FBtr0112844 1 4 4 142 3L 3829728 3829746 CTTCCGTTGCCACAATCTC 59 3829851 3831729 CATGTTGCCTCGTCTATTGC 59 NA Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0073076 1 1 2 80 3L 3376882 3376901 TGGCAGATACCCGTAAAGAC 59 3376944 3377013 CTATCAGCCGGGAATCCTG 59 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073063 3 1 2 260 3L 3319900 3320527 ATGAAGGCAATCCCATTCG 58 3320751 3320769 TACCAATGACCAGCCACTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12078 FBgn0035426 FBtr0073092 3 1 1 60 3L 3243477 3243497 AAACGCCATTCTCATCAAGTC 59 3243437 3243455 CAAATTGATGAGGGCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32486 FBgn0052486 FBtr0073004 3 1 1 103 3L 3056917 3057005 ATTCACCGAGACGAGTACC 58 3056832 3056850 CTTTGTTGGCCAGCATACG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 2 4 4 62 3L 3053680 3053698 TTTGTACGATCCGTTCACG 58 3053722 3053799 GAATTGATGCCGAATAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 1 2 2 80 3L 2299262 2299769 ACCTAAAGCTGAGTGACCT 57 2299813 2299831 GGCTCATCGAACAGTACAG 58 NA Nonspecific Drosophila melanogaster 61 yellow-g FBgn0041709 FBtr0072902 1 1 1 92 3L 2271127 2272258 ATCAGAATGGACTTCTGTGGG 59 2271055 2271073 TTATGGCCACGATCTTGGG 59 NA Drosophila melanogaster 61 RabX5 FBgn0035255 FBtr0301528 1 1 1 80 3L 1669611 1669690 ACTACAGTCTGGAAATGTGGG 59 1669551 1669571 CACTCGCATTGCGATAATAGG 59 NA Drosophila melanogaster 61 CG7970 FBgn0035252 FBtr0072762 3 1 1 198 3L 1653241 1653321 AAATCCATTACGGCATGCG 59 1653483 1653501 GGAAGAATCTTCGGAAGCG 58 NA Drosophila melanogaster 61 Cct2 FBgn0035231 FBtr0072742 1 1 1 80 3L 1554337 1554355 GACGCACGGTTATGAATGG 59 1554399 1554476 GAGCATTCGGAACGATCTC 59 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 2 2 2 80 3L 1285044 1285062 CAGATACTCTACCGCAACG 57 1285106 1287945 GTGACGACTGTCAACTAGC 58 NA Drosophila melanogaster 61 Mkp FBgn0083992 FBtr0110977 3 1 2 60 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183650 183668 CGATAAACATTCGAGCTGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299865 2 1 6 192 3L 171867 172078 TAGTAATCACACCACAGCGA 58 172233 172251 TAGGTCTCAAACTCGCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299866,FBtr0072475 2 2 6 150 3L 171972 172073 TGTGTTGTGTAATCACACCAC 59 172182 172203 ATTGCAAAGTTCTGGTAGATGC 59 NA InUTR Drosophila melanogaster 61 5SrRNA:CR33452 FBgn0053452 FBtr0086444 1 1 1 60 2R 15617161 15617179 ATACATCGGTTCTCGTCCG 59 15617119 15617137 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 3 1 1 106 2R 17521017 17521035 TAAATGGGCTTACGTTCGC 58 17520831 17520947 GATGGTTCGGTTGATGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 uzip FBgn0004055 FBtr0072397 1 1 1 80 2R 20915991 20916072 GAATATGACTGAACTGGTTACTAGG 59 20916104 20916128 GTATAGCTTAGAATAGTCTCCACAG 58 NA Drosophila melanogaster 61 CG3776 FBgn0035088 FBtr0072395 3 1 1 81 2R 20857653 20857674 TAATTCGACCCTACTTCGACAG 59 20857716 20857786 GAGGATACTACCTGCAGCG 59 NA Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 1 2 2 147 2R 20856570 20856654 TAACACAAACTCGCGTCAG 58 20856441 20856459 CTTACGCTTTCCGAATCCG 59 NA Drosophila melanogaster 61 Orc4 FBgn0023181 FBtr0072425 2 1 1 93 2R 20684553 20684633 AAAGACAACGCTCATCAACTC 59 20684480 20684498 CAGATTACCGTCCAGGTGG 59 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867,FBtr0089868 2 2 2 80 2R 20462815 20462896 GCATTGTGATCAATGGAGAC 57 20462937 20462957 CAAAGAGCGATTTGTAGATGG 57 NA Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 1 2 2 80 2R 20447024 20447042 GGAGGCCGAGAAGATACTG 59 20446640 20446980 AAATGCCAAGTGTCGACTG 58 NA Drosophila melanogaster 61 CG5602 FBgn0034922 FBtr0072132 3 1 1 89 2R 19779215 19779233 GATTGCAAGGCTAGCAAGG 59 19779286 19779359 GGGACACTGACAGTATGCA 59 NA Drosophila melanogaster 61 wibg FBgn0034918 FBtr0072233 3 1 1 122 2R 19743905 19743923 AATCCGGGAAATCGAACAG 57 19743801 19743819 TCCAAGTCCTTGATCTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)dtl FBgn0013548 FBtr0072085 1 1 1 142 2R 19590165 19590183 TTTACAACAAGTTGCGGGC 59 19590563 19590581 TTCCGGATTGAAGTCTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072105 1 1 4 134 2R 19496192 19496944 GAGATTCGTTGCTGTAAGGTC 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA Drosophila melanogaster 61 bw FBgn0000241 FBtr0114457,FBtr0072117 3 2 2 250 2R 19425227 19425303 AGCATCTGTACTTTATGTCCC 57 19424997 19425015 TTTGATCACCGAATAGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 3 2 2 177 2R 19246362 19246380 GAAGATGTCGCAGATCGGA 59 19246581 19246599 CTTAGGCTCCGTCTTGGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854 2 1 2 60 2R 19246244 19246263 TTTACACTGCGACGATTCAG 58 19246283 19246369 ACATCTTCAAGTGCTGAATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30410 FBgn0050410 FBtr0301852 2 1 1 60 2R 19243078 19243100 CATCTGATACTCGACTACAACCT 59 19243119 19243138 CGTCTATGTTGGGATTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr59a FBgn0045483 FBtr0071964 3 1 1 86 2R 18969010 18969091 CAGCATGTCCAATGAGTTGAG 59 18969139 18969157 TTGACACGATAGAGTCCGC 59 NA Drosophila melanogaster 61 Gmer FBgn0034794 FBtr0071905 3 1 1 141 2R 18776093 18776165 GATTTGACAAATCTGGCCG 57 18775912 18775930 TAATGAGCAGGTTGTTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13532 FBgn0034788 FBtr0071899 2 1 1 104 2R 18760892 18760989 TCTGTCATGTTTGACACCCA 59 18761056 18761074 ATCTCTAGGAATGCGGGTG 59 NA Drosophila melanogaster 61 CG30272 FBgn0050272 FBtr0071890 1 1 1 80 2R 18717782 18717859 AACTTTCCAGAGTACGATTGG 58 18717901 18717919 CTGTGTCAGTATGTAGCCC 57 NA Drosophila melanogaster 61 RpS24 FBgn0034751 FBtr0071935 2 1 1 115 2R 18528897 18528916 TCTAATAAATCGCGTTCGCA 58 18528553 18528571 GTTGGTCATGAACTTGCGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 RpS24 FBgn0034751 FBtr0071935 1 1 1 300 2R 18528897 18528916 TCTAATAAATCGCGTTCGCA 58 18528368 18528386 TCGTAGATGAGGGCAAAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 3 2 2 60 2R 17557068 17557088 ACTTATCTACCAGACGCATCC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG10321 FBgn0034643 FBtr0071660 1 1 1 150 2R 17522472 17522889 ATAAATACAGCGCAGCCTC 58 17523003 17523021 CAGTCCATCAGCATTTCGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 clt FBgn0000326 FBtr0071687 2 1 1 67 2R 17505886 17505967 CAGTGACTTCCACTTTCCC 58 17505837 17505855 GTCGGTAATTCAGGGTGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10505 FBgn0034612 FBtr0071619 1 1 1 80 2R 17174518 17174598 GAGGATTGAGAGCTTAACACG 58 17174458 17174477 ATGGACCTAATGGTCGAGTG 59 NA Drosophila melanogaster 61 CG10444 FBgn0034494 FBtr0086305 2 1 1 80 2R 16160813 16160831 GACCCTTTGCTAAAGGGAC 58 16160694 16160772 AGGATATTGACCCATAGTCTCC 58 NA Drosophila melanogaster 61 CG7735 FBgn0034446 FBtr0086534 1 1 1 80 2R 15332076 15332150 GAGATTTGTGGTGGTCAAGG 58 15332191 15332211 AAGAGAATTGGCACAATTCGG 59 NA Drosophila melanogaster 61 Ir56a FBgn0050125 FBtr0086595 3 1 1 147 2R 14983140 14983160 TGGTCCTACTTGTATATGGGA 57 14982917 14983031 GTTCCGATGAGTTGTACCA 57 NA Drosophila melanogaster 61 DptB FBgn0034407 FBtr0086621 2 1 1 118 2R 14754938 14754959 CGCTAGTCTTCTATTCATTGGA 57 14755038 14755112 AATTGGGAGCATATGCCAG 58 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 3 2 2 113 2R 14697625 14697644 TATTCTTTGCCCTTACGGTG 58 14697465 14697549 CCGACCAATTATACTCGGG 57 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 1 4 4 142 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646372 14646455 AAATTGCTTAAACCCTGCTCC 59 NA Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 3 3 3 80 2R 14588756 14588832 GAGCTGCAAAGCTATATGCA 58 14588874 14588893 ATGTGCTACGGATAGATCCT 57 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 2 3 3 92 2R 14007593 14007612 AGCAACAGTACGAGTAACAC 58 14007460 14007540 GAAGTTGACCTCAAAGTCCAG 58 NA Drosophila melanogaster 61 CG5757 FBgn0034299 FBtr0086787 2 1 1 86 2R 13981598 13981681 CGGCAAAGAGCGTTATGAG 59 13981530 13981548 AAATAGCTGCCCTCCTTGG 59 NA Drosophila melanogaster 61 CG6362 FBgn0028740 FBtr0089556 3 1 1 94 2R 13659985 13660003 GGTCGTGGTCTTATGGAGG 59 13659750 13659927 TCGGCATCAAAGCAATTCC 59 NA Drosophila melanogaster 61 CG18635 FBgn0034279 FBtr0089557 3 1 1 80 2R 13656737 13656805 GCAATTACGAGACCTCTGC 58 13656675 13656695 GATAACTGGTGGTTATGGCAG 58 NA Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0086946,FBtr0113090 2 2 2 64 2R 13438859 13438880 GCAATCGGATATTCAGAATCCT 58 13438957 13438975 GATCTTCTACGGGCTCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9640 FBgn0034182 FBtr0086972 3 1 1 247 2R 12933619 12933637 CATTGCCAGTATTCTGCGA 58 12933848 12933923 CGGTCCTTAAATGAGCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 2 2 2 89 2R 12909215 12909234 AGGATGTACATCGAGCAGAG 59 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 ste24a FBgn0034176 FBtr0087059 1 1 1 105 2R 12889345 12889363 CATCATTGGACGCAGACAC 59 12889107 12889278 GTTTGGTACACTTTCACCTGG 59 NA Drosophila melanogaster 61 CG4927 FBgn0034139 FBtr0100547 1 1 1 60 2R 12459850 12459868 ATTGGCCTCAGGAGATTCG 59 12459963 12459982 GGCAGGAAGTTCTTATCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 2 1 1 74 2R 12386523 12386707 CACGAGGAGTACAAGGACC 59 12386467 12386487 CTGACGGTAGTATTCCCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8386 FBgn0034061 FBtr0087264 2 1 1 95 2R 11894883 11894964 CAGGCACTAATTAAGTATGTGGAG 59 11894811 11894829 CTTTCCGAACCACTTGGTG 59 NA Drosophila melanogaster 61 CG30088 FBgn0050088 FBtr0273296 2 1 1 80 2R 11578970 11579052 TATGAGGCCGTATCTAAAGGTG 59 11579093 11579111 GGAGAACAAGATCCACCCT 58 NA Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087385 2 1 3 85 2R 11270791 11270916 CGATAAGATCATTGATCGCTACC 59 11270961 11270979 CTTGCAAATCCCAGCACAG 59 NA Drosophila melanogaster 61 CG12853 FBgn0040747 FBtr0087406 3 1 1 114 2R 10821034 10821052 TTTCAAGCGAGCAACATCG 59 10821200 10821218 CAGCTCCTTTCTTAGCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp6a22 FBgn0013773 FBtr0087450 2 1 1 119 2R 10760366 10760451 CATAGCAGAAACCCTTCGG 58 10760534 10760552 ATCAGTAGCATTTGACCCG 57 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 3 2 2 94 2R 10636930 10636950 CCATAATGTGGTAGGTCAGGT 59 10637004 10637088 CATGACCAGCATTGTTGTAGG 59 NA Drosophila melanogaster 61 CG12858 FBgn0033958 FBtr0087476 3 1 1 113 2R 10631361 10631380 CATGAACTACGGCATTGAGC 59 10631205 10631289 TCTGGATATAGATTGGGATCCAC 59 NA Drosophila melanogaster 61 RpI1 FBgn0019938 FBtr0087511 2 1 1 80 2R 10486373 10486453 CAAGATTGCTGGAAAGAATTGG 58 10486314 10486333 CTTAGGTCGTTTCCTTCTGG 58 NA Drosophila melanogaster 61 Arc1 FBgn0033926 FBtr0087560 2 1 1 60 2R 10247467 10247486 GTAGAAGGTATCAGCGACGA 59 10247426 10247444 CCATACCGTAGAACAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112614 1 1 3 80 2R 10213582 10214327 TCTGGATAAATTACGTCAGGAGAG 59 10214366 10214384 CAAACGGAGGACAGATCGT 59 NA Drosophila melanogaster 61 CG12765 FBgn0033813 FBtr0087742 2 1 1 145 2R 9118200 9118221 TTCCGTAGTAAAGGGAAATGTG 58 9118387 9118406 TCATACCGCATGCTAATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4646 FBgn0033810 FBtr0087764 2 1 1 188 2R 9107380 9107457 AGTCGAATGCTCCCTACAC 59 9107210 9107228 TCTTCTGGTCGTACTCCAC 58 NA Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112740 3 1 2 108 2R 9046598 9047046 ACAAGATGAACGGTCTGGA 58 9047117 9047136 TGCACGTTTCGTTTATTCAC 57 NA InUTR Drosophila melanogaster 61 CG13321 FBgn0033787 FBtr0087792 2 1 1 97 2R 8841160 8841472 ACATGGGAGACTACACCTG 58 8841533 8841551 AAAGATGGGATCCTGGTCG 59 NA InUTR Drosophila melanogaster 61 CG33627 FBgn0053627 FBtr0091604 3 1 1 114 2R 8298859 8298877 GGACATATGCCAGTTTGCC 59 8298955 8299021 GTAAAGGCCCTTGGTATGC 58 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015,FBtr0088013,FBtr0088014 1 3 3 188 2R 8055651 8055669 TAATGACAGCGGAATTGCC 58 8055415 8055499 AAGACTTACGGCTGTAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065,FBtr0088066 2 2 2 60 2R 7676129 7676150 GTTCTACTATTTCTTCAGGCCC 58 7676090 7676112 CACTATAATACCAGTTCCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082,FBtr0088083 1 2 2 80 2R 7578186 7578204 TAATCTTATGCGCAGCAGC 58 7578033 7578055 GGATTGAGTACCTCATTGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 sprt FBgn0082585 FBtr0088146 1 1 1 80 2R 7274092 7274179 GGACATCACAGACAACATAGAC 58 7274033 7274053 AGCATCTGGAGTTCTTCTCTG 59 NA Drosophila melanogaster 61 CG34225 FBgn0085254 FBtr0112418 2 1 1 60 2R 7132979 7132998 CTGGTTGTATGGACTCTCGT 59 7133021 7133039 CAGCAGGATCCTCATTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13226 FBgn0033594 FBtr0088108 2 1 1 60 2R 7132088 7132111 CTACGGTTATAACTATGGATACCC 58 7132130 7132148 TCTGTAGTAGTTCTGCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 2 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30016 FBgn0050016 FBtr0088241 2 1 1 80 2R 6762777 6762853 CCACATATTGGATACTTCGGTG 59 6762718 6762737 CATTCCTGAATCTCGTCCAG 58 NA Drosophila melanogaster 61 CG12343 FBgn0033556 FBtr0088247 1 1 1 60 2R 6710449 6710471 GACAATCCAGATCTTGGTTTCTC 59 6710411 6710431 ATCGGTTGTACTGTCTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 1 2 2 117 2R 5937146 5937272 AGAGAATCTTCCCTTCGGG 58 5937353 5937371 CTTCTTGAGCAGTTGGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30005 FBgn0050005 FBtr0088464 2 1 1 82 2R 5495074 5495092 ATCGATTCCAGAAGGTGCC 59 5495133 5495218 GTCTGCGAGATATCTTATAATCGC 59 NA Drosophila melanogaster 61 CG33757 FBgn0053757 FBtr0091758 3 1 1 155 2R 5342189 5342272 CGGTCAATAATGTTCATATGCG 58 5342055 5342077 GGATGTAAGGTTTCAGATACTCG 58 NA Drosophila melanogaster 61 Rme-8 FBgn0015477 FBtr0088618 3 1 1 80 2R 5057396 5057415 TGGAAATTCAATGCATCGGA 58 5057279 5057354 TGACAGTAGAGTTATCCGGG 58 NA Drosophila melanogaster 61 CG8777 FBgn0033376 FBtr0088565 1 1 1 80 2R 4990136 4990218 CTCACTACATCCTGATAAATGAGG 58 4990256 4990275 GGGAATTGGGAAACATTCGT 58 NA Drosophila melanogaster 61 CG34219 FBgn0085248 FBtr0112412 2 1 1 84 2R 4806151 4806169 GTGGTATCTCCTTTGGCCA 59 4806026 4806103 TAAGACGAGGCTCGAAACG 59 NA Drosophila melanogaster 61 CG12376 FBgn0033323 FBtr0088706 3 1 1 80 2R 4591030 4591118 ATGGCCATTAAAGCTTTGCT 58 4591158 4591179 CATAGCATAAATGGCTTCCTCG 59 NA Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 1 2 2 80 2R 4496832 4496851 GGTACTTTGAGAGGATGGAC 57 4496893 4496972 TCTCATTGGAAATCTTGGCT 57 NA Drosophila melanogaster 61 CG14755 FBgn0033282 FBtr0088738 3 1 1 80 2R 4235818 4235837 CTGAATCTGTGCATTACCCA 58 4235880 4235898 TTAGCCATGAGCTGATTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbp49 FBgn0260398 FBtr0300659 3 1 2 60 2R 4018677 4018779 CACGCACATTTCTAACAAGG 57 4018636 4018656 GAGGAATCGTTCATGTTCTCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8713 FBgn0033257 FBtr0088780 3 1 1 81 2R 3983739 3983820 TTATGGTCGGGTATATCCTGTG 59 3983861 3983880 CAGAAGTAGCTCCCATCCAG 59 NA Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 1 2 2 82 2R 3721690 3721708 TGTGGAGTACCATGTGGTC 59 3721751 3721829 AAAGACTTCCATCTGATCTGTG 58 NA Drosophila melanogaster 61 CG30383 FBgn0050383 FBtr0088897 3 1 1 95 2R 3711950 3712204 AGATTAAGAAAGGCGATTCCCT 59 3711876 3711895 CTTTGCTTCGATACCCAACG 59 NA Drosophila melanogaster 61 CG2065 FBgn0033204 FBtr0088922 2 1 1 85 2R 3551794 3551870 GCTGCTGGATTCAAGAAAGAG 59 3551917 3551935 TTGGTCAGTGTTCTGGGAC 59 NA Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 3 3 3 82 2R 3490154 3490639 TTTGGATAAAGTGGGTCTTCG 58 3490092 3490110 CCGAGAAGACCTTGATCCA 58 NA Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 3 2 2 80 2R 2126348 2126368 GATTCAGTCACAGCTATACGC 59 2126407 2126500 CCTTTGCATACAACTGTATGGG 59 NA Drosophila melanogaster 61 CG14590 FBgn0033061 FBtr0086022 1 1 1 91 2R 1967764 1967782 TAGGCTGTTACACTCCGTG 59 1967636 1967654 CATTGACTCGTGCTTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17337 FBgn0259979 FBtr0086038 2 1 1 95 2R 1586849 1586931 CTGAGTACAAGAAAGACATTGG 57 1586987 1587005 CAGAAAGACTGGGATAGCG 57 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 2 4 4 80 2R 1436211 1436232 TATACTGGACCGAATATGTGCT 59 1436270 1436343 ATTGCCACCATGTCATATTTCG 59 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467,FBtr0091528 2 2 2 81 2R 1091742 1091763 GAGCATTGGTAAATTCATCTGG 57 1091628 1091701 TGGATGTTGGATATGTCGTC 57 NA Drosophila melanogaster 61 snoRNA:Me28S-A2958 FBgn0086037 FBtr0114313 1 1 1 60 2L 16417854 16417873 GAATGTCAGTGGATGATTGC 57 16417813 16417832 AGTTGGTAATCGACAACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31808 FBgn0062978 FBtr0080943 1 1 1 88 2L 16715832 16715850 GCCTACCTAGCTGAATCCA 58 16705781 16715780 ACGCACAAGCGTAATATGC 59 NA Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111259 3 1 4 82 2L 22431287 22432689 GTGCATGCTTTGAGGTACC 59 22432730 22432753 GTATTTCGCAGGTACTATTCTTCC 59 NA InUTR Drosophila melanogaster 61 CG15219 FBgn0040519 FBtr0085944 2 1 1 104 2L 22105193 22105211 TAATGGTGCATCTGCATCG 58 22105059 22105125 ATTGGAGAGTAAAGCCCGT 58 NA Drosophila melanogaster 61 CG1421 FBgn0032966 FBtr0085928 3 1 1 60 2L 21903550 21903570 CTACAGGAATGGCTATTGTCG 58 21903591 21903610 AGTTGATCGGAAATGATCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33844 FBgn0053844 FBtr0091848 1 1 1 60 2L 21503799 21503821 CTAGAATTATTCCGCGTCATCTG 59 21503840 21503859 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9247 FBgn0032924 FBtr0081499 2 1 1 121 2L 21162327 21162345 GCCGAGGAATATCTGGACC 59 21162169 21162244 TTGTACCGATCGAGTAGATGC 59 NA Drosophila melanogaster 61 CG9247 FBgn0032924 FBtr0081499 1 1 1 83 2L 21162288 21162307 GCCCTTTGTCAAGTTCTTGG 59 21162169 21162244 TTGTACCGATCGAGTAGATGC 59 NA Drosophila melanogaster 61 CG33511 FBgn0053511 FBtr0091451 1 1 1 80 2L 21081255 21081356 CAGCCCTTAAGTTTGACTATTACC 59 21081198 21081217 CGTAACCAGGTTGAATCTCG 58 NA Drosophila melanogaster 61 CG31676 FBgn0051676 FBtr0081424 2 1 1 94 2L 20845445 20845463 ACTGGAGCTACGTGAACTG 59 20845521 20848567 CTTGCCGTAGACTTCTTGC 58 NA Drosophila melanogaster 61 Spn3 FBgn0028986 FBtr0081450 1 1 1 103 2L 20837900 20837973 TGAAGTATTTGTGCCTGCT 57 20837815 20837833 AATGAGATTCTTGTCGGCA 57 NA Drosophila melanogaster 61 CG17470 FBgn0032869 FBtr0081406 3 1 1 60 2L 20642496 20642516 GATCCAAAGGATCTGGAGGAG 59 20642456 20642477 TCTACTTGTCGTATCGAACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11019 FBgn0040998 FBtr0081359 1 1 1 78 2L 20427170 20427188 AGACCGATTCCATAACCGA 58 20427227 20427248 GGAATATAGCTATTGCCAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081339,FBtr0081338 3 2 2 136 2L 20096892 20096910 TTACAAGCAAACCTACGGC 58 20096712 20096730 AAATGGGACAGGGATTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081338 2 1 2 152 2L 20097165 20098030 TGGCATCCAAATTAACTTCAGG 59 20097034 20097052 TCTTCAGTCGAAGTCTCCG 58 NA InUTR Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081328,FBtr0081329 3 3 3 93 2L 20063604 20063681 ATTTACTTGCCTGAGTGGC 58 20063738 20063756 GTGTCCATACGCGAATCTG 58 NA Drosophila melanogaster 61 CG10628 FBgn0032818 FBtr0081323 3 1 1 96 2L 19757886 19757963 TGCAGCTTATCCCTTTACCA 59 19757809 19757827 GATCAGACCGGGAAGATCG 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081214 2 1 6 168 2L 19404137 19404155 CGAGGAGGGATTCCATGAG 59 19403705 19404005 CTTCTTGCAATCCCTGCAG 59 NA Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0081095,FBtr0273194 1 2 2 60 2L 18689957 18689975 CTAAGAAGCGAGCTGTGAG 58 18689999 18690017 GGACCTCGAAGTGTTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msl-1 FBgn0005617 FBtr0081130 1 1 1 80 2L 18687239 18687258 GATGATTATCCGTGGATGCA 58 18687118 18687199 AAGGTAATTCTGATTCTGCCAG 58 NA Drosophila melanogaster 61 CG34171 FBgn0085200 FBtr0112362 1 1 1 80 2L 18378841 18378935 CTGCATTACAGACCCTAAACG 59 18378974 18378995 ACAACAAATTCCTCTGACTCTG 58 NA Drosophila melanogaster 61 CG17681 FBgn0032668 FBtr0081038 2 1 1 102 2L 18153616 18153694 TGTTTATACTGGTGCATCGT 57 18153759 18153777 AATCCTCTCGACCAATCCA 58 NA Drosophila melanogaster 61 CG34170 FBgn0085199 FBtr0112361 3 1 1 62 2L 17311721 17311742 CGTTAAGGATAAGCTGAATCTG 57 17311680 17311698 AATCCATCCCGGTATACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12288 FBgn0032620 FBtr0080957 2 1 1 97 2L 16901653 16901736 AGGACGAAGAAGGAGTTAAGC 59 16901576 16901594 CAGCTGTACACGTTTGGTG 59 NA Drosophila melanogaster 61 CG6115 FBgn0040985 FBtr0080959 3 1 1 97 2L 16887665 16887800 ACAAGCACTTGCAGTATTTGG 59 16887588 16887607 GTCCTTGTGGTTCATGAAGG 58 NA Drosophila melanogaster 61 yellow-b FBgn0032601 FBtr0080894 3 1 1 97 2L 16755951 16756979 CTTGATCTTAATGATACCTCCAGC 59 16757035 16757053 GAAACCAATTCCGGTTCGG 59 NA Drosophila melanogaster 61 CG33552 FBgn0053552 FBtr0091522 2 1 1 60 2L 16682858 16682876 AAAGAAGATCGCCGAAGAG 57 16682898 16682918 TCCGGTAACCTCATAATTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838 1 1 2 73 2L 16343298 16344437 CTGAAGAAGGAGACTTGCG 58 16343243 16343261 GAAATCGCTCTCCTTTGCG 59 NA DesignRelaxed Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 1 2 2 91 2L 16310057 16310075 CTTTGTACCGGAACATGCG 59 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 twe FBgn0002673 FBtr0080855 3 1 1 85 2L 16261497 16261601 AATAGATCAGGATGGCGAGC 59 16261431 16261450 GAAATTCTCCTGACCACACG 59 NA InUTR Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 3 3 3 84 2L 16045892 16045910 GGATCCGAGAAGGAATCGG 59 16045957 16046036 GGATTTGGCTCGCAATACTC 59 NA Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080694 3 1 2 164 2L 15004048 15005967 TGTTGGACTAGTGCTTCGG 59 15006094 15006113 GGAGTTCTTGCCAATCACAC 59 NA Drosophila melanogaster 61 Mst35Ba FBgn0013300 FBtr0080682 2 1 1 89 2L 14879243 14879261 AGAAAGGATCGATACCGCC 59 14879123 14879143 CCTATCTCAGTATTGCTGGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18095 FBgn0028872 FBtr0080606 3 1 1 200 2L 14030852 14030873 GTCTTCAGTTTCTCAGTCAACG 59 14030489 14030691 GACTTATGTTGAGGCGCTC 58 NA Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080589 3 1 2 84 2L 13980372 13980390 CGTAAGCACCAGAACTCAG 58 13980436 13980517 TAAAGCCCAAGTAAGTCTCAG 57 NA Drosophila melanogaster 61 RpII33 FBgn0026373 FBtr0080544 3 1 1 60 2L 13833872 13833892 TCATAATTAAGCTGCGCAAGG 59 13833914 13833932 AATCCCTTCTTGGCGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16888 FBgn0032533 FBtr0080572 1 1 1 60 2L 13812787 13812805 CTGAAGAAGCTACTGGCAC 58 13812745 13812764 TTGACCTTCTATGCTGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31814 FBgn0051814 FBtr0080580 2 1 1 80 2L 13684542 13687537 AGATATGATCATATCGGACACCTC 59 13684485 13684505 ATGTACTTTGTGTAACCGCTG 59 NA Drosophila melanogaster 61 CG16820 FBgn0032495 FBtr0080452 2 1 1 170 2L 13249380 13249398 TGCAAGTGAACAGTGTTGC 59 13249531 13249615 CCTTGATGTTGTCGATGGTG 59 NA Drosophila melanogaster 61 CG16812 FBgn0032488 FBtr0080445 1 1 1 87 2L 13223854 13223872 GAAATCGTTCCCGAATCGG 59 13223922 13223999 GTTTGGATACCATTCCGAGC 59 NA Drosophila melanogaster 61 CG18788 FBgn0042126 FBtr0289986 3 1 1 97 2L 12035124 12035205 CTTGGGATTTACCTTAGTTTGC 57 12035262 12035281 AGGAGTTGCTAGTATTGCAC 57 NA Drosophila melanogaster 61 Or33c FBgn0026390 FBtr0080280 2 1 1 95 2L 11938687 11938784 AACTCTTGGTGCGATTCCA 60 11938843 11938861 CAATGATGCACAGAGTGGC 60 NA Drosophila melanogaster 61 CG6230 FBgn0027582 FBtr0080228 1 1 1 80 2L 11117101 11117180 CGTCAATTATGTGCGTTAACC 58 11117041 11117062 CAAGGATCTTGAACATTTGGAG 57 NA Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 3 2 2 84 2L 10839579 10839597 GGCCACATGATTGAATGGT 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 1 2 2 80 2L 10013571 10013643 CGAAGGAAAGATCACATCCA 57 10013510 10013529 CTAATGCATCATCCTTTGCC 57 NA Drosophila melanogaster 61 Muc30E FBgn0053300 FBtr0302413 3 1 1 60 2L 9903055 9903195 TGCTATGCCATTTATTCTGTCG 59 9903016 9903035 CAGAGTGATAAAGGGCAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 FKBP59 FBgn0029174 FBtr0079872 2 1 1 81 2L 9889397 9889470 AAGCAGGAGTGTAATGAGGT 58 9889514 9889532 TAGTCAAGTTGCATTGGCC 58 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 1 2 3 116 2L 9685192 9696198 ACATCAGCCATTTCCCTCC 59 9685094 9685114 CGGATTTCAAATCGTCTTCCA 59 NA InUTR Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 2 2 2 80 2L 9611432 9611451 CAAGGTTCTTAAGCGTCCTG 59 9611493 9611571 TTGCCACAGGCATTATACTG 58 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 3 3 3 83 2L 9549654 9550211 AGGTTAAGGACTGGTTTGTG 57 9549590 9549609 TGTAGACAAATAGAAGCGCC 58 NA Drosophila melanogaster 61 CG13102 FBgn0032088 FBtr0079766 2 1 1 80 2L 9012554 9012640 CAACTGGAATAACGATGTGATCC 59 9012680 9012698 GGCTTAAGTGCTAAGCTGC 59 NA Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0113029 2 1 2 83 2L 8958881 8958900 TTACTCAATGCCGGATTTGC 59 8955526 8955546 AGTATCACAATCATCAGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 PrBP FBgn0032059 FBtr0079750 1 1 1 60 2L 8685391 8685410 ACCAGTTTCTACGACAACGA 59 8685350 8685368 AAATGTAGTACAGGCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U26 FBgn0027780 FBtr0089673 2 1 1 80 2L 8447856 8447928 TTAGCTTGGGTTTAATCACCAG 58 8447797 8447815 AATCTTCGAGCCATAGGCA 58 NA Drosophila melanogaster 61 CG17293 FBgn0032030 FBtr0079650 3 1 1 60 2L 8375344 8375363 GCAATAAGGTGTCCGTACTG 58 8375386 8375404 TTGAACTGAACGCATTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 1 2 2 80 2L 8367179 8367198 CCTCACCGAGACCATATACG 59 8367238 8367321 CCAACGAGACTAGTAAAGTTGC 59 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935,FBtr0301187 3 2 2 105 2L 8213435 8213454 AGCGATGGCACCATATACTC 59 8213522 8213791 GTTTGCCTTCACTGATGGC 59 NA Drosophila melanogaster 61 CG7203 FBgn0031942 FBtr0290272 2 1 1 66 2L 7753127 7753145 GTTTCGTTTCAAGCGTCAC 58 7752792 7752810 AACAGGACTACGACAACGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 1 4 4 80 2L 7729222 7729243 GATGAGTTGCAACAATAGTTGG 58 7729109 7729185 GGATCAACTCTATAGTCATCGAC 58 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 3 2 2 136 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018952 7018972 TGACCGTATTTCAGATCTCCC 59 NA Drosophila melanogaster 61 CG13771 FBgn0031844 FBtr0079323 1 1 1 106 2L 6663202 6663222 GAAACAGATGCTCTGTTGAGG 59 6663052 6663134 AGATGGCAGATCCACACTG 59 NA Drosophila melanogaster 61 CG31637 FBgn0051637 FBtr0079287 3 1 1 80 2L 6525812 6525895 CCAGAAGAGATCAAGCAAATCC 59 6525936 6525954 GTTGAAGTTCTCGATGCGG 59 NA Drosophila melanogaster 61 CG9548 FBgn0031822 FBtr0079264 1 1 1 83 2L 6490334 6490353 TGTAAATCTAGGCAGCTCCA 58 6490205 6490292 CGGAGAGCAGATTAATAGTTCTG 58 NA InUTR Drosophila melanogaster 61 Sec61alpha FBgn0086357 FBtr0079266 3 1 1 104 2L 6479052 6480041 AGCGCAAGATCCAATTCAG 58 6478966 6478985 AGTCTGAGCTCATGATACCG 59 NA Drosophila melanogaster 61 Arc-p20 FBgn0031781 FBtr0079200 1 1 1 93 2L 6125672 6125690 ATCGACAAGGAGATCAGCG 59 6125747 6125833 TTGCCTTCACCTAGAACCG 59 NA InUTR Drosophila melanogaster 61 CG9162 FBgn0031778 FBtr0089943 1 1 1 131 2L 6078629 6078698 CCGTATACATTACTAAACTACAGGC 59 6078781 6078805 CTTCATATAGTTCCTATCTCAAGGC 58 NA InUTR Drosophila melanogaster 61 CG9154 FBgn0031777 FBtr0079213 3 1 1 80 2L 6070277 6070298 ACTTTAGTATAGCACTGCTCTC 57 6070164 6070237 ACTCGAATATGTGCACTGTG 58 NA Drosophila melanogaster 61 CG9150 FBgn0031775 FBtr0302213 3 1 1 118 2L 6067954 6067972 TCTTCCCGGAAGAGATCCA 59 6067797 6067877 GATTTCATGTACCTGAACATGAGG 59 NA Drosophila melanogaster 61 mtm FBgn0025742 FBtr0079223 1 1 1 89 2L 6035336 6035354 AACCATCGTGGATCATCTG 57 6035210 6035283 TTGTGCTTGAGATCTTCGG 57 NA Drosophila melanogaster 61 CG13998 FBgn0040949 FBtr0079241 1 1 1 60 2L 5956783 5956802 GCTAAGACGATGACGTTCTG 58 5956742 5956760 GCCAGGTTGGATTTAAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 2 1 2 93 2L 5764270 5765977 CATGTTTGGCTCAATGGCT 59 5764195 5764213 CTCAATGTAGGCATCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079104 3 1 2 92 2L 5554296 5554379 ACGATTTCAACCATCGTATTCG 59 5554430 5554450 GTATCTACGCAAACTGTGCTC 59 NA Drosophila melanogaster 61 TotM FBgn0031701 FBtr0079073 3 1 1 119 2L 5329905 5329981 TATTTGAGCTGCCTTATGGTC 58 5330060 5330080 AACCGAAGAATCACCATACAC 58 NA Drosophila melanogaster 61 Trip1 FBgn0015834 FBtr0079053 3 1 1 112 2L 4966963 4967036 ACCATCATCACAGGTCACG 59 4966869 4966887 AACTGCATGTCGTTGATGC 59 NA Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 3 2 2 80 2L 4840093 4840173 CCTTGATTCTAGGTTGGATGGA 59 4840214 4840232 GTTTGGCCAATTCTCCACC 59 NA Drosophila melanogaster 61 CG15443 FBgn0031609 FBtr0077450 2 1 1 89 2L 4462685 4462703 GTTCCTCCAGAGCAATGAC 58 4462554 4462632 ATGTGAGGTCCAGTTAGCT 58 NA Drosophila melanogaster 61 Cog3 FBgn0031536 FBtr0077573 1 1 1 80 2L 3455496 3455573 CAGCAGAATCCTGTTGCAC 59 3455434 3455452 GAAGACTAAACGCTCCTGC 58 NA Drosophila melanogaster 61 CG12795 FBgn0031535 FBtr0113019 3 1 1 173 2L 3453114 3453137 GGATTTCAGTCCATATTCAAGACC 59 3453269 3453437 GTCTTCGCTCATATTGCCC 58 NA Drosophila melanogaster 61 CG34175 FBgn0085204 FBtr0112366 1 1 1 60 2L 3398315 3398334 AATCCTCCTTGCAAAGAAGC 58 3398353 3398375 CTTTATTCTCGGACTTCTTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3326 FBgn0031519 FBtr0077603 2 1 1 91 2L 3318317 3318465 CAACCGGCTATAATATTCATAGACG 59 3318250 3318268 TCGTTCTTCAGGCGTAGAG 59 NA Drosophila melanogaster 61 CG15406 FBgn0031517 FBtr0077580 1 1 1 80 2L 3309435 3309453 CAGCATATTCAAATCGGGC 57 3309497 3309786 AAGGTTATCAGAGTGGCAC 57 NA Drosophila melanogaster 61 Ts FBgn0024920 FBtr0077679 2 1 1 60 2L 2968688 2968707 CATTAAACGTCAGGTGCAGG 59 2968647 2968667 GTCGACTATCTGAAAGTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8814 FBgn0031478 FBtr0077629 3 1 1 123 2L 2875255 2875396 CAATAATTAGGTATGGCGGCG 59 2875481 2875499 ACAGCCCGTAGAACTTGAG 59 NA InUTR Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 2 4 4 81 2L 2738607 2738692 TATTGAGATATCCCGCCGA 57 2738737 2738755 GCAAGGTAATAGGTTCGCA 57 NA Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077766,FBtr0077765 2 2 2 130 2L 2378208 2378226 TCAACTATTCACCTGCCCA 58 2378374 2378398 CAGAGACTTATCTTTGTTCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31681 FBgn0051681 FBtr0077802 1 1 1 60 2L 2286160 2286178 ATAGGCATGGTTAGCTGGG 59 2286118 2286137 CAATATCTTCGTAGACGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4271 FBgn0031409 FBtr0077756 3 1 1 60 2L 2285202 2285221 TCTTATTTGCACGAAGCTCC 59 2285243 2285262 CAGAAGTCAAACTTTGCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32463 FBgn0052463 FBtr0077808 3 1 1 84 2L 2239221 2239239 CAAACGGATCCCTATGCCT 59 2239092 2239113 GGTGATCGTCTTCATTATTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 1 4 4 87 2L 2224614 2224633 AATCTACCATCCAGACGGAG 58 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077849 2 1 2 119 2L 2191942 2191960 TGACCTATGTGAATGAGCG 57 2190776 2191859 CATCGGGAACTTTCAGGAG 57 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 1 3 3 80 2L 2040348 2040429 TTCACAGTGCTGATTACACC 58 2040472 2040490 AAGCATGGCATCTTTACGG 58 NA Drosophila melanogaster 61 haf FBgn0261509 FBtr0077875 2 1 1 84 2L 1601903 1602330 CGACTTGCAGGTTACATCG 59 1602378 1602396 AATGGAGTAGAAGCCTCGG 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 1 3 3 80 2L 1180919 1181008 GAAATACGATACTCCCGATGTG 58 1181048 1181067 TAGAGTCCTGTAACGTGGTC 58 NA Drosophila melanogaster 61 CG6398 FBgn0030870 FBtr0074462 1 1 1 81 X 17734953 17735033 GATGCCAGTTTACTCGCAG 59 17735076 17735096 GTAAGGTCCTGGGTAGATCTG 59 NA Drosophila melanogaster 61 CG4880 FBgn0030803 FBtr0074342 1 1 1 80 X 16781375 16781393 CACCAGGTACTCAACCAGG 59 16781436 16781667 CAAGACGATTGCCTCATTGG 59 NA Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0071416,FBtr0112972 1 2 2 80 X 9925207 9925225 GTTAACCATCATGCTCCGC 59 9925264 9925353 GGAGTAGTCAATATTTAACTCGGC 59 NA Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 2 1 1 146 X 9506236 9506329 AAAGGTCATTGCCTTCCTG 58 9506439 9506457 TCATGGCCCAATCTTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 7SLRNA FBgn0000003 FBtr0081624 1 1 1 60 3R 2648245 2648264 TAATCACGCTTCTGTGAGGT 59 2648287 2648305 GCTACGCAGTAGATCCCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 1 1 1 71 3R 24943549 24943567 GCACCACTCATGAAGTCAG 58 24943602 24943682 GTCCTCTGACTCCGATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 1 2 2 165 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006154 20006172 CTGTTCTGTCGAGGATCCC 59 NA Drosophila melanogaster 61 ns1 FBgn0038473 FBtr0083426 3 1 1 101 3R 12897424 12897445 GTTGGAATTCCTAATGTAGGCA 58 12897282 12897364 TTGCATTGATTTGGTCACTCC 59 NA Drosophila melanogaster 61 Hel89B FBgn0022787 FBtr0301715 1 1 1 80 3R 11808225 11808312 GCCTTGAAGCAACTTCTCC 59 11808356 11808374 GCAGAAGATTAGGGCACGA 59 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 3 2 2 165 3R 11183847 11183865 CTGCAGAAGTACCATTCCC 57 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13557 FBgn0034867 FBtr0072019 2 1 1 92 2R 19363505 19363808 AGTCGCTATGGCAACAGAG 59 19363431 19363450 AGCAGGGATACACCAATCTG 59 NA Drosophila melanogaster 61 eIF2B-gamma FBgn0034029 FBtr0087336 2 1 1 85 2R 11430402 11430476 CTTTACAGAGGTCATTGTTGTG 57 11430521 11430540 GTCTCAGCTTTAAGGGAGTG 58 NA Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 2 1 1 255 2R 6308354 6308372 AATATCGGAACCGAGGCAG 59 6308059 6308137 GGAGGTAGGCAATTTGATGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gadd45 FBgn0033153 FBtr0089049 1 1 1 154 2R 3137204 3137222 CGAGAACGACATCTACGTG 58 3137340 3137358 AGTCGACTAGCTGGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068,FBtr0301066,FBtr0301067 1 3 3 80 2L 2029691 2029709 GCTAAATCCGCAGTTCCAG 59 2029753 2029850 CACAGCTGGTTGAAACAGG 59 NA Drosophila melanogaster 61 Plap FBgn0024314 FBtr0077980 1 1 1 152 2L 1169750 1169768 CAACTACAAGCTGAGCTGC 59 1169550 1169634 AAGTACTCGTTCCCATGGG 59 NA Nonspecific Drosophila melanogaster 61 dbe FBgn0020305 FBtr0078030 1 1 1 60 2L 869207 869225 GCGGGATATAGTCCTGGAG 58 869165 869188 CAGAGCCTTAATGTTGTATATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 2 2 2 81 2L 1152224 1152242 GTGGAGATCGTCAACTCCA 59 1152100 1152183 GTAAAGCCAACTCGGTATAATCG 59 NA Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083,FBtr0078084 3 2 2 60 2L 477914 477935 CTCTTCTAGTAGCCAAGACGAG 59 477875 477894 GGAAGAGGAACTACAGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 1 6 6 80 2L 14976 14997 AATTATGTGCCTTATGGACCTG 58 14859 14938 AATTACATCGTTGGATCTTCGC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0100386,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 8 8 117 3L 9825858 9825877 AGATTTGAAATGGCCACCAC 59 9825956 9826036 TGTGTAGTCCCGGTTAACTC 59 NA Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079578,FBtr0079577 3 2 2 60 2L 8148004 8148022 CCAACTCTAGTCGGATCAC 57 8148044 8148064 GGAAATGGTTTAGAGGTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl11 FBgn0045443 FBtr0082247 2 1 1 117 3R 6227618 6227639 GCTGCAATCTGTACTTCATCTG 59 6227717 6227802 AAGTAGCCAGCATATCCGG 59 NA Drosophila melanogaster 61 CG13393 FBgn0032035 FBtr0079719 2 1 1 60 2L 8383881 8383902 CATCATCCAGTTTGTTTACTGC 58 8383842 8383862 AGATAGGAAGGAGTTGAACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082069 1 1 2 60 3R 5385743 5386005 TTCTACTACAGTCCCACAGG 58 5386028 5386046 CAGGGATTGCAATGTCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31468 FBgn0047351 FBtr0084473 2 1 1 73 3R 19525910 19525928 AAAGCATGTCGTGCAATCG 59 19525795 19525814 CTTAAACCCAAAGGTGCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 3 2 2 132 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579725 2579804 TTGTAAGCCATCTATAGTATCCGG 59 NA Drosophila melanogaster 61 CG9257 FBgn0032916 FBtr0081465 3 1 1 60 2L 21103199 21103217 ATGACGAGGTGCTCTACAG 58 21103236 21103259 GGTAAATCGTACCCAAATGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TepI FBgn0041183 FBtr0080811 1 1 1 80 2L 15890949 15891021 TTCAAATATTACTGACGTGGGC 59 15890890 15890908 ATCACCCAAGAGGTCAACG 59 NA Drosophila melanogaster 61 ACXE FBgn0040506 FBtr0080416 1 1 1 80 2L 12928709 12928791 CTCATATCGTGGATGTGTATCTC 58 12928831 12928849 ACATGACAGACACCATTCG 57 NA Drosophila melanogaster 61 RunxA FBgn0083981 FBtr0110992 1 1 1 82 X 20468153 20468172 CAACGACCGTTCCATTTCTC 59 20464599 20468108 GTGTTGCTTGCACTCTGAC 59 NA Drosophila melanogaster 61 Csat FBgn0024994 FBtr0070501 2 1 2 162 X 2597433 2597549 ATAGCATACACATGAACGCC 58 2596778 2596796 ATCAGTTTGGCGAACTCTG 58 NA Drosophila melanogaster 61 yellow-e FBgn0041711 FBtr0082757 2 1 1 60 3R 9236529 9236547 GGTGTGGTTTACTTCCAGC 58 9236110 9236128 GGACATTCTTATGCACGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG34308 FBgn0085337 FBtr0112504 1 1 1 60 3R 8915294 8915313 CACCCTCATCACTATCACCA 58 8915336 8915354 CCACAAAGGATTTGCACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 3 5 5 156 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684160 1684178 CATCACCGAAGCACAATCG 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0071527,FBtr0301900,FBtr0301894,FBtr0301898,FBtr0301895,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0301901,FBtr0301896,FBtr0071528 3 15 15 124 2R 16911516 16911534 CATTTACTTGGAAGGCGCT 58 16911621 16911697 TAAGAATGATGGCTGGTTCC 57 NA Drosophila melanogaster 61 Arc42 FBgn0038742 FBtr0083817 2 1 1 66 3R 15703603 15703621 CAATCAGTACTCACCCGCT 59 15703738 15703756 ATGAGGCAATTTGACGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 lin-28 FBgn0035626 FBtr0077090 3 1 1 148 3L 5649719 5649737 GTCAGGTTTCCGATCACTG 58 5649849 5649936 GAGTCCGGCGATTTATTCG 58 NA Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 3 2 2 92 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418647 1418665 CGGACTGATTCTTGGTGAC 58 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 2 5 5 60 XHet 66315 67541 CTATAGCTGCACGATTGCC 58 66273 66291 CTGTCCTCTACATCCACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 swaPsi FBgn0016974 FBtr0070923 2 1 1 270 X 6256362 6256380 CAGTATAGGCTGAGTCGCC 59 6256057 6256128 CATGATGTTCGCCACTACC 58 NA DesignRelaxed Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 2 1 1 198 X 6174554 6174572 ATTGCGATGAGACATACGC 58 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CR32661 FBgn0030356 FBtr0073593 2 1 1 116 X 11812517 11812635 AGCGACGGAAATCTATTTGTG 59 11812421 11812440 TCGATTGACTTGAATGGCAG 58 NA Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111190,FBtr0111189 2 2 2 60 X 22363897 22363918 CATTCTTATCAATAACGCCGGA 59 22363858 22363876 GTCTACCGACATAGTCAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15461 FBgn0040649 FBtr0077311 2 1 1 94 X 20357281 20357299 CGTTGAGTCGAGCAATCAG 59 20357434 20357452 AGATGATCGTCAATACGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MKP-4 FBgn0031044 FBtr0074741 3 1 1 82 X 19517737 19517820 CTTGTGCACTGCTACTTCG 59 19517865 19517884 AGGAAGTCCAGATTGTGTCG 59 NA Drosophila melanogaster 61 CG7772 FBgn0030883 FBtr0074540 3 1 1 108 X 17800362 17800695 TCATCAATCGGATCACCTG 57 17800272 17800290 ATGATAAGCGGTATGCTGG 57 NA Drosophila melanogaster 61 par-6 FBgn0026192 FBtr0074455 2 1 1 80 X 17597692 17597713 GAACAAGATAAACACAACGTCC 58 17597754 17598418 AACTCTGCATCGAACTTCG 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 1 3 3 80 X 17469922 17469940 CGTTCAGTTTGGGTTCGAG 59 17469786 17469878 ATTATCGGAATGGGCTTGC 58 NA Drosophila melanogaster 61 CG4653 FBgn0030776 FBtr0074321 1 1 1 230 X 16598127 16598147 CCGGTTCAGTCATATTCACAC 59 16598339 16598660 TTTAGCTGGGTAGCTCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12539 FBgn0030586 FBtr0073987 3 1 1 88 X 14738675 14738693 GATGTCAATCGACTGGTGC 59 14738549 14738623 TCTCTGGGTACATTCGGTC 58 NA Drosophila melanogaster 61 CG11584 FBgn0030541 FBtr0073893 1 1 1 91 X 14075125 14075236 GTGAAGATGAAACCCTTTGCA 59 14075289 14075307 AAAGGTGGCAGATACTGGG 59 NA InUTR Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 2 2 2 112 X 12369770 12369790 TACAGCAGCAACCTCTTAGAC 59 12369864 12369956 GAATCGGTGCTTTGCTGTC 59 NA Drosophila melanogaster 61 Met FBgn0002723 FBtr0073521 3 1 1 181 X 11512180 11512267 ATATGAAGGATGAGGTGCG 57 11512412 11512430 CTCCAGAAATCCCTTGGTG 57 NA Drosophila melanogaster 61 CG32698 FBgn0052698 FBtr0071386 1 1 1 80 X 9742678 9742698 TGATTTCAAGACGACGAAGTC 58 9742736 9742943 CAACTGGTCGCTTTATAGTAGAC 59 NA Drosophila melanogaster 61 CG6041 FBgn0029826 FBtr0070861 1 1 1 83 X 5843244 5843262 TGGATCTGGTCACCTATGC 58 5843309 5843392 TTGTCGGTGATGTAACAGC 58 NA Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070842 3 1 2 188 X 5638457 5638478 AGAATATAGCAGAAAGCGAGAG 57 5637847 5637867 ACCAGGAAGAGTATGATTGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32758 FBgn0052758 FBtr0070843 3 1 1 89 X 5617387 5631141 TCCTGGAAGTAAATGGCGT 59 5617316 5617334 TCAGAGTTAGGCAGTCACC 58 NA Drosophila melanogaster 61 CG34434 FBgn0250904 FBtr0112735 3 1 1 168 X 5509828 5509972 CAAGAACACAAACGTCGAG 57 5509678 5509696 AACTGCATTCCAATCACGA 57 NA Drosophila melanogaster 61 NAAT1 FBgn0029762 FBtr0070797 2 1 1 80 X 5301719 5301791 TCTTTCTGATCGGCAAACC 58 5301657 5301675 ACCAAATCTTCACCGTTCC 58 NA Drosophila melanogaster 61 CG5062 FBgn0029747 FBtr0070759 1 1 1 90 X 5075542 5075624 GATTGCAGGTACTACACCG 58 5075470 5075488 CATTTGGCCTCGGATATCG 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589,FBtr0290088 3 5 5 80 X 5118231 5118249 CCTCACCTCAATGAAGGTC 57 5118291 5118399 ATCATATACCACTTTCGTGGC 58 NA Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293 2 1 2 60 X 1368823 1370302 GATCCGGTGAACAGTTCCT 59 1368781 1368800 TAGAGGAGACAGGTCTTTCC 57 NA DesignRelaxed Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293 1 1 2 60 X 1368817 1370296 GTGAACAGTTCCTCGTCCT 59 1368775 1368794 TACTGGTAGAGGAGACAGGT 58 NA DesignRelaxed Drosophila melanogaster 61 TfIIA-S-2 FBgn0040338 FBtr0070184 1 1 1 84 X 905422 905522 GGATGAGATGATGGAGAGGG 59 905357 905377 AGCTGTTGAAATGCTCTTGTC 59 NA Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 3 2 2 100 4 1052490 1052511 CACACTTCTCAGTTAGTTCGAG 58 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA InUTR Drosophila melanogaster 61 toy FBgn0019650 FBtr0089185 3 1 1 83 4 1026627 1026703 CAAACACAGGTGTCATTTCTG 58 1026748 1026766 AATTGCTTCCCGTTAGGTC 57 NA Drosophila melanogaster 61 CG32850 FBgn0052850 FBtr0089123 3 1 1 80 4 337128 340085 TGTATCATCAGGGAGAGCA 57 340127 340147 TGTTAGAAGATGGTGTTAGCG 58 NA Drosophila melanogaster 61 CG32006 FBgn0052006 FBtr0089170 2 1 1 87 4 173539 173619 ACCAACACTCCCATTTCTG 57 173670 173688 TTGAATTTGAAGCCAGCAC 57 NA Drosophila melanogaster 61 awd FBgn0000150 FBtr0085864 2 1 1 142 3R 27571579 27571598 CTTTCATCATGGTCAAGCCC 59 27571277 27571295 ATCAGCGTAGTGCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 1 3 3 80 3R 27502875 27502963 CGCTTTAATATTCCTTTGCCCA 59 27503003 27503022 TGGTACTTGCTTCTGATGCT 59 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 1 2 2 80 3R 26709833 26709912 CAAGTACTACAAGATCTGCTCTG 58 26709775 26709794 TCAATATAGGGTCGTTTGGC 57 NA Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587 3 1 2 96 3R 25953955 25953973 AATGTGGAGCTAACCTGCA 59 25953811 25953895 CGACCGCATCTTCTTTGAG 59 NA Drosophila melanogaster 61 CG18731 FBgn0042213 FBtr0085459 3 1 1 92 3R 25550881 25550967 GACTCGATACATCAGTTTCAAGG 59 25551019 25551037 TTTCCTCTACACTGGGAGC 58 NA InUTR Drosophila melanogaster 61 CG34296 FBgn0085325 FBtr0112492 3 1 1 111 3R 25548324 25548398 GAATGGCGATTGGTGACTC 59 25548473 25548491 GATCCAGTGACCACTTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085444,FBtr0085443,FBtr0085445 2 5 5 80 3R 25420051 25422967 GAGAAGATCACAAGAGACGAG 58 25423009 25423027 GTCTCTGTTCTGCAGACAC 58 NA Drosophila melanogaster 61 CG11842 FBgn0039629 FBtr0085362 2 1 1 88 3R 24878510 24878579 GATATAGCCAGGACGTGCA 59 24878631 24878649 ATAATCGGAGCGTTCTCGA 58 NA Drosophila melanogaster 61 CG33346 FBgn0053346 FBtr0302527 1 1 1 87 3R 24495453 24495539 CAATTTAAAGTCAGATCGGCC 57 24495585 24495606 ACTATTCATCTGAAAGGTAGCC 57 NA Drosophila melanogaster 61 CG12413 FBgn0039588 FBtr0085293 2 1 1 152 3R 24369996 24370085 GTCACTGGATGATGTTCAAGAG 59 24369865 24369884 TTTGTTTCTTCAGGTGTGGC 59 NA Drosophila melanogaster 61 Sce FBgn0003330 FBtr0085245 2 1 1 135 3R 23506476 23506494 GATTTGCCAGAGGCTTGTC 59 23506302 23506381 CCATAGGTTTGTTTACCTTCCAG 59 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125,FBtr0085126,FBtr0085124 1 3 3 80 3R 23058594 23058671 CAACAGGCATCTAAACGCC 59 23058532 23058552 TCTTTCATCAGGGCATTTGTG 59 NA Drosophila melanogaster 61 eater FBgn0243514 FBtr0301115 1 1 1 80 3R 22925218 22925295 AAAGGAACTGCTGTGAACG 58 22925156 22925174 AAGACATCTGAGTGCGGAG 59 NA Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 2 1 1 64 3R 22772353 22772425 TTATGCGCACGTTTAGAGC 59 22772450 22772471 CGAATAATGAATCCACTCGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 T48 FBgn0004359 FBtr0085065 2 1 1 129 3R 22709886 22709904 TCAGTGGAGGCTTCAAGTC 59 22735249 22735267 TACATTGGGCACTTGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 Lgr3 FBgn0039354 FBtr0084899 2 1 1 81 3R 21501215 21501236 TGTCGGTAATCCCATTAAGGAG 59 21501277 21501415 CATTAGGGCCAACGAAAGTG 59 NA Drosophila melanogaster 61 CG5107 FBgn0039342 FBtr0084879 3 1 1 203 3R 21331001 21331080 GGCCAATGCAATAGAATTGC 58 21331243 21331264 ACCTCCTTGATAATACAGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42488 FBgn0259991 FBtr0300440 2 1 1 94 3R 21308948 21308966 TACATGGACTGCATGACCC 59 21309076 21309097 GATTGTACTATCTTCTGGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13658 FBgn0039315 FBtr0273361 3 1 1 112 3R 21113667 21113686 TCATCCGAGATCGTTATCCT 57 21113759 21113837 CTTAAGAAAGTCAGGTCGCTC 58 NA Drosophila melanogaster 61 CHORD FBgn0029503 FBtr0084554 1 1 1 80 3R 20013075 20013093 TCAACCTGGTATTTCCCGA 58 20013134 20013213 CATTGCTCACATTCACAATTCC 58 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425,FBtr0301859 2 3 3 109 3R 19341012 19341030 GCTTTATCCTGTCTTGGCT 57 19340868 19340939 CCAACCAGATTCCTCTTGG 57 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 CG17298 FBgn0038879 FBtr0084056 3 1 1 245 3R 17109001 17109316 TCAAAGTACTGTTCGTGCT 57 17109587 17109605 CTGGAACCAATGGAACCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 2 1 1 83 3R 16876551 16876630 CAAGTTTGGGACAGTTGCC 59 16876486 16876505 GAATCCTGGTGACTGTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 1 3 3 106 3R 16526040 16526323 TCTTCAAGGTTTGGATATTCGG 58 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 1 2 2 99 3R 16384906 16384988 CGAGATACAACAAGCGGTC 58 16385051 16385069 TATCTGGATGGTGGGAACG 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443,FBtr0113398 3 4 4 81 3R 13316117 13317464 CATTTCCCATATTTACCTGGTATCG 59 13316060 13316080 GAAAGTATCACTCGCTGTGAC 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352 2 1 6 87 3R 12484779 12558422 AAAGTACAAATGGTCTGCGA 57 12484711 12484729 TGATTCGTGTGGAACTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162 1 1 2 103 3R 11497895 11504868 CAATGCCGATCTTGGATGC 59 11504932 11504953 CGAGATGAGAACAATCAAGACC 59 NA Drosophila melanogaster 61 CG9286 FBgn0038183 FBtr0082830 1 1 1 97 3R 9606885 9606965 ATAAGGGAAACGAGGAGGTG 59 9607025 9607043 AAGGAATAGTCGCTGCAGG 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 2 4 4 61 3R 7646930 7647007 AAATTGCGCAAGACAGAGG 59 7646887 7646905 AACTCAGCGTCATCTAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Di FBgn0040251 FBtr0082378 3 1 1 81 3R 6978743 6978966 TCACAGATATGGTTGGTTCCC 59 6978682 6978700 TACAGCGACATGTGATCGT 59 NA Drosophila melanogaster 61 nerfin-2 FBgn0041105 FBtr0082177 2 1 1 86 3R 5898613 5898762 TTTCGACGTCAAGCTTACC 58 5898810 5898830 CTGGGACTTGAAGAAATCCAG 58 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 2 3 3 90 3R 5399132 5399151 CTGTACAACGGGATGATTGG 58 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 Rlb1 FBgn0014022 FBtr0082062 3 1 1 142 3R 5339111 5339189 GGTGATATCCAACAAGAAGGTC 58 5339291 5339310 CTGTGTTCTTGCGTAAACGA 59 NA DesignNoJunction Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 2 4 4 93 3R 4871946 4872261 CATGAACTTGAACCAGGTGC 59 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 CG15589 FBgn0037409 FBtr0078591 1 1 1 81 3R 2032046 2032699 TCAACTCAGCAGGGAACTG 59 2032742 2032762 TCGCATGTACTTGAAGAATCG 58 NA Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 1 2 2 89 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418643 1418662 ACTGATTCTTGGTGACCTCG 59 NA Drosophila melanogaster 61 PEK FBgn0037327 FBtr0078770 2 1 1 97 3R 1287863 1287883 GGATGTGGATATAAAGGTGGT 57 1287723 1287806 GGTGATCAAACTTGTACTTCC 57 NA Drosophila melanogaster 61 CG32450 FBgn0052450 FBtr0078501 2 1 1 80 3L 22323189 22323207 CTGTTTGTGGTAGTTCCCT 57 22323251 22323328 AGCCACTGTATGCATACTC 57 NA Drosophila melanogaster 61 kni FBgn0001320 FBtr0078283 3 1 1 125 3L 20688193 20688212 ATAAACCTAGTGCCCATCCA 58 20687138 20687371 CAAAGAAGGACTTGCAGCC 59 NA InUTR Drosophila melanogaster 61 CG42374 FBgn0259720 FBtr0299975 2 1 1 87 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259703 AATGTACGACCGTGTTGAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18136 FBgn0036839 FBtr0075040 2 1 1 93 3L 18994614 18994633 CTCCATGAGACCAATACCCA 58 18994484 18994559 CAGAAAGTTCCTCCATTGCG 59 NA Drosophila melanogaster 61 CG32202 FBgn0052202 FBtr0075051 1 1 1 87 3L 18675401 18675419 ATGTACAAACAGCTGGTGG 58 18675468 18675549 TCCCATTTACTCTCATCACAC 57 NA Drosophila melanogaster 61 Krn FBgn0052179 FBtr0075197 3 1 1 293 3L 17647269 17647288 TAGTGAAGCCACTTGAAAGC 58 17643630 17643651 CATCTTGATCTTAACTCATGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Krn FBgn0052179 FBtr0075197 2 1 1 292 3L 17647269 17647287 AGTGAAGCCACTTGAAAGC 58 17643630 17643651 CATCTTGATCTTAACTCATGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0075224 1 1 2 155 3L 17474056 17474591 ACAGCAATAGGTGAAACAACG 59 17473921 17473939 CAAACCAGGCAATCCATCG 59 NA InUTR Drosophila melanogaster 61 CG13725 FBgn0036708 FBtr0075248 1 1 1 60 3L 17318414 17318438 CCTTATTGTGTTGAGTATCATGGAC 60 17318378 17318398 CGTTTCAAACCAACAGAAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9951 FBgn0036671 FBtr0075337 2 1 1 60 3L 16857593 16857614 CAGGATACATGAATTCATCGGG 59 16857631 16857653 CAGAACTTTGTAGATATCCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075450,FBtr0075449,FBtr0075451,FBtr0075448,FBtr0114589 3 6 6 126 3L 16111388 16111406 CACCACGATATCGAAGCAG 58 16111495 16111621 TATTTGCACAATGTTCGCCT 58 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075500 2 1 3 105 3L 16033154 16039592 CCGTCAAGTTTCGACTTCAG 59 16033068 16033087 ATCAGCTACAACAGATGCCA 59 NA InUTR Drosophila melanogaster 61 CG9007 FBgn0036398 FBtr0075768 1 1 1 98 3L 14003676 14003803 TTGGTCAGCAAATTGCTCG 59 14003863 14003883 CAGGATCAATATCTGTGCTGG 58 NA Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075755 1 1 2 88 3L 13875279 13875747 CAAATAAGAAGCGACCGGC 59 13875799 13875817 GTTGGGCTCAAATTTCGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 1 2 2 80 3L 12064091 12064175 GTTGTGGCAAGGTGATATACTC 59 12064032 12064050 TGTCCCTTAGCAACTGACC 59 NA Drosophila melanogaster 61 Sgs3 FBgn0003373 FBtr0076096 1 1 1 191 3L 11505337 11505355 GAAGCTGACCATTGCTACC 58 11505583 11505601 TGCGTGGTAGATTGTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Klp67A FBgn0004379 FBtr0076499 3 1 1 97 3L 9359641 9359665 CAGGGTATTCGATATAGACAATTCC 59 9359501 9359587 ATACCGAGCAGTTGTATCCA 58 NA Drosophila melanogaster 61 CG6983 FBgn0035896 FBtr0076659 3 1 1 88 3L 8437642 8442256 GCATCAAGACCACCATGTG 59 8437572 8437591 CACCAGACCTTTGGTATGTC 58 NA Drosophila melanogaster 61 Cpr65Ec FBgn0035737 FBtr0076909 2 1 1 135 3L 7086387 7086479 AACAAATTCTTCGTCCTTGCC 59 7086574 7086594 TCTGGTACTGATAGGCATAGC 58 NA Drosophila melanogaster 61 CG32388 FBgn0250849 FBtr0076933 1 1 1 101 3L 6977516 6977534 CAAATCGCCGAAGGATTCG 59 6977370 6977451 GGAACAACAGTTCTGCCAC 59 NA Drosophila melanogaster 61 CG6462 FBgn0035663 FBtr0077039 3 1 1 60 3L 6030842 6030862 GTTACTTGGGAGATTCAACCG 59 6030883 6030902 ACCTCCGCATCTAAGTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32232 FBgn0052232 FBtr0073373 3 1 1 60 3L 4994722 4994740 TGTTGCAGGAGTTTCAAGG 58 4994680 4994700 CAGAGTAGAAACACTGATCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15005 FBgn0035508 FBtr0073255 2 1 1 137 3L 4204129 4204148 AGTTTAGTTCGCGCTTTGTC 59 4203144 4203162 GACTCAGTCTTAGGCGTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073179 1 1 3 126 3L 3901913 3901937 CAATATTCGTAGAGGGTTAATAGGG 58 3901729 3901747 TTCCGGTCAAAGTCTTCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14965 FBgn0035414 FBtr0073109 1 1 1 60 3L 3192069 3192088 CAGCAACACCTAATACCACC 58 3192028 3192046 TCTCACCATCCACGAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 1 4 12 61 3L 2461252 2465104 GATAGATGCGGAATTCGGA 57 2465128 2465147 TTCCCGTCTTAAGAATGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12011 FBgn0035257 FBtr0072764 3 1 1 80 3L 1694636 1694728 CTCATCATGCATTCTCTACGA 58 1694767 1694788 CTTGTCCTGTTCTAGAACTCTG 58 NA InUTR Drosophila melanogaster 61 CG33230 FBgn0053230 FBtr0072757 3 1 1 162 3L 1618609 1618858 GCAAGAGTGCAAGCATAGAG 59 1618983 1619001 ATGAACGTAGAGGTCGTGC 60 NA InUTR Drosophila melanogaster 61 robl62A FBgn0028567 FBtr0072695 1 1 1 60 3L 1477943 1477963 GATGATAAGCTGTGCTTTCTG 57 1477984 1478003 CTGGACTAACCAGGAATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 2 2 2 81 3L 1035389 1035409 AACAGGATCATTCGTGAATCG 58 1035452 1035568 ACTGCCATCCCTTCATCAC 59 NA Drosophila melanogaster 61 5SrRNA:CR33382 FBgn0053382 FBtr0086374 1 1 1 60 2R 15643002 15643020 ATACATCGGTTCTCGTCCG 59 15642960 15642978 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33385 FBgn0053385 FBtr0086377 1 1 1 60 2R 15641895 15641913 ATACATCGGTTCTCGTCCG 59 15641853 15641871 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33442 FBgn0053442 FBtr0086434 1 1 1 60 2R 15620887 15620905 ATACATCGGTTCTCGTCCG 59 15620845 15620863 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11413 FBgn0035022 FBtr0072305 3 1 1 129 2R 20424116 20424134 GACATCATGGACACCATGG 58 20424227 20424245 GCCGAGTGATGAACTTGTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG16837 FBgn0035009 FBtr0072297 2 1 1 81 2R 20363001 20363024 GAAGTTCGAGGTTATCAGTAACTG 59 20363062 20363153 TAGGATCGACTGCGAATAACC 59 NA Drosophila melanogaster 61 angel FBgn0016762 FBtr0072083 1 1 1 60 2R 19582364 19582382 ACACCTATCGTCCTGACTG 58 19582406 19582424 GGAATTCAATAGGCGAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 2 2 2 108 2R 19580461 19580481 TCTTTCTCGTTCAGAACTCTC 57 19580315 19580392 GGAAGTATTATTGGGCACCT 57 NA Drosophila melanogaster 61 Rrp4 FBgn0034879 FBtr0072111 1 1 1 92 2R 19443280 19443298 GAACTACGACGGAGATCGG 59 19443143 19443225 AAAGATGTTCTGGACCTCGG 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0086222,FBtr0301760 2 5 5 209 2R 16492938 16492957 ATTGGGTAACGGACTGAGTG 59 16493191 16493209 TTACCAATGATGGCACCAG 57 NA DesignNoJunction Drosophila melanogaster 61 Dpt FBgn0004240 FBtr0086620 1 1 1 64 2R 14753545 14753563 TATGGACAGCACTTGGGAG 59 14753591 14753609 TAGGTGCTTCCCACTTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5009 FBgn0027572 FBtr0089548 2 1 1 80 2R 13649722 13649741 CAAAGCCTGCATCATAGGAG 58 13649781 13649856 AGCAGAGCATTGTAAGTATCCA 59 NA Drosophila melanogaster 61 Dcr-2 FBgn0034246 FBtr0086904 1 1 1 80 2R 13466224 13466308 ACAATTTACAGCGATCCCA 57 13466162 13466182 ACTGTAGAGTACTTTACACGC 57 NA Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 1 1 1 60 2R 12943888 12943908 CGAAGGCTCAGAAGATAACTC 58 12943784 12943869 CTGTTTCCCTATTTGTTCAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 1 2 2 109 2R 11997154 11997175 CTATAAGATTGTCATCCTGGGC 58 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 Cyp4aa1 FBgn0034053 FBtr0114558 3 1 1 95 2R 11833305 11833324 TGTACGAGAATCTGGATGCC 59 11833379 11833460 AAACGGCCTCATTTAGTATGTC 58 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015 1 1 3 105 2R 8055705 8055942 CTACACCATGTTGTGCGAC 59 8055618 8055636 AGACGAAGTCGAGATGGTG 59 NA InUTR Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 2 2 2 91 2R 7294171 7294189 GAGGAGCTCTTAGTGGAGC 59 7294243 7294317 ACCACAGTTCTCATGAAGCA 59 NA Drosophila melanogaster 61 luna FBgn0040765 FBtr0088210 1 1 1 88 2R 6878625 6987050 ATCAATGGCAACAGACCTG 58 6878555 6878573 ATTGTCCAGATTGCTGTGC 58 NA Drosophila melanogaster 61 CG33476 FBgn0053476 FBtr0088319 3 1 1 60 2R 6298053 6298071 CTGTGGACCATTCTGTGGA 59 6297923 6297942 TCCATGATAAACTTGGAGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33477 FBgn0053477 FBtr0088320 3 1 1 60 2R 6296820 6296840 CTTCAAGTGTCCTATCAAGCC 58 6296780 6296799 CATGGACATTATGCCATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Def FBgn0010385 FBtr0088432 1 1 1 78 2R 5942051 5942069 AAGTTCTTCGTTCTCGTGG 57 5941991 5942009 GATCCACATCGGAAACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vang FBgn0015838 FBtr0088566 3 1 1 117 2R 4991312 4991398 AATATGACAGGAGACGGCAG 59 4991478 4991496 TTTGCTCCGAGGTATTCCC 59 NA Drosophila melanogaster 61 CG8232 FBgn0033352 FBtr0088654 2 1 1 80 2R 4818143 4818225 GATTCCATAAGTGATGAGAACTCC 59 4818259 4818282 GATCTTACTGATGTCAGTTTCTGC 59 NA Drosophila melanogaster 61 Odc2 FBgn0013308 FBtr0088864 2 1 1 80 2R 3895786 3895864 GAGATGTTCGAGGAAATAGCG 59 3895905 3895924 GGAAATGATTCGGATACGCT 58 NA Drosophila melanogaster 61 Tsp42Ej FBgn0033132 FBtr0089030 2 1 1 132 2R 2929228 2929306 CCATATACTACCTAATTTGCAGTGG 59 2929396 2929414 GTCTTTCGCTCGAAGAGGT 59 NA Drosophila melanogaster 61 Dpit47 FBgn0033083 FBtr0086146 1 1 1 124 2R 2548741 2548818 AACAAGATGAAGAAGCTCGAG 58 2548637 2548655 TCGTCAAACTTAATGGCGC 59 NA Nonspecific Drosophila melanogaster 61 l(2)k14710 FBgn0021847 FBtr0086000 2 1 1 80 2R 2100658 2100736 AAAGGACACGGAAATGATTAGC 59 2100599 2100619 CTAACGAGATCGTATTCCTGC 58 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 1 5 5 80 2L 21617537 21617559 GATAGTAATAGTCGCGAATGCAG 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 His1:CG33819 FBgn0053819 FBtr0091823 1 1 1 60 2L 21461388 21461407 AGTTGAGAAGAAAGTGGTCC 57 21461430 21461448 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 3 1 1 106 2L 21164686 21164764 GATAACCAGGAAACAGCAGG 58 21164833 21164851 TTCCTGGTAAAGTGTTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18810 FBgn0042133 FBtr0081386 1 1 1 60 2L 20649862 20649880 CACGACGGATTTGATCTGG 59 20649902 20649922 TTGTTTCTGAGCACCAATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 3 2 2 84 2L 19959683 19959761 ACATCTTCGTGTACGATGAG 57 19959808 19959826 ATTTCCAGGTCGATGATGC 58 NA Drosophila melanogaster 61 CG13077 FBgn0032810 FBtr0081257 1 1 1 81 2L 19566369 19566391 CTATATTTCCTATCTCACGCTGC 59 19566432 19566516 GAAGGAGAACCCGATGGTC 59 NA Drosophila melanogaster 61 CG10495 FBgn0032750 FBtr0081150 1 1 1 108 2L 19063374 19063392 TTATAACCATGCACCTGCC 58 19063464 19063543 CTATAGCGCACCATTGGAG 58 NA InUTR Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0080949,FBtr0114502 1 2 2 80 2L 16905364 16905385 CCAAATATACATCATCCTCGGC 59 16905587 16905670 TGCACCGTATTCGAATTCC 58 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004,FBtr0300003,FBtr0300005 3 3 4 185 2L 16657880 16657898 AATTATCGGGATGAACGCA 57 16658116 16658136 TGCATGATGGTGGTTATTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 ppk FBgn0020258 FBtr0080638 2 1 1 83 2L 14379901 14379919 GTTCTTCGCCTTTCTGCAG 59 14379781 14379857 TTGAGAAAGACCTTATAGCCCT 58 NA Drosophila melanogaster 61 CG3769 FBgn0032119 FBtr0079810 1 1 1 70 2L 9435662 9435680 CACAACGACTCCCAAAGAG 58 9435825 9435843 TAATGGCCGTCGTCTTACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34366 FBgn0085395 FBtr0112591 1 1 1 99 2L 9381757 9384654 CCTCAACTATTACAGAACTGGA 57 9381679 9381697 CTGATTTGAGTCGAGTCCC 57 NA Drosophila melanogaster 61 Toll-4 FBgn0032095 FBtr0079768 1 1 1 81 2L 9085456 9085474 CTCGAAATCTGAACAGCCG 59 9085518 9086251 CAGTTAATGTCTCCCATCCG 58 NA Drosophila melanogaster 61 CG32984 FBgn0052984 FBtr0079758 1 1 1 88 2L 8965355 8965433 GGATCACTACGATAGGATGGG 59 8965483 8965501 TACACTCCACCAGCATTCC 59 NA Drosophila melanogaster 61 CG14273 FBgn0032024 FBtr0079605 1 1 1 80 2L 8343774 8343792 GAGATCGAATGCACGACAG 59 8343834 8344084 GTCGATTCGTTAAGTTGGAGC 60 NA Drosophila melanogaster 61 Acp1 FBgn0014454 FBtr0079500 3 1 1 90 2L 7741520 7741541 ACAGATCAGTTCAGAACAAGAG 58 7741333 7741351 AGGTGAAGATAACGGCGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atac1 FBgn0031876 FBtr0079362 2 1 1 60 2L 6960051 6960070 GAGAATCCGCAACATATGCT 58 6960010 6960031 AATTATCCGCTATCAAAGGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 2 2 2 92 2L 6674205 6674225 AACTGAAACTAGTGGAACCAC 58 6674356 6674374 GTCGATCCAATACCGATGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34011 FBgn0054011 FBtr0100066 1 1 1 83 2L 5717148 5717169 CTTCATCAACATTCTGGAAACC 58 5717212 5717338 TCCTTGGAATAATGTTCCGC 58 NA Drosophila melanogaster 61 mid FBgn0005511 FBtr0079093 1 1 1 97 2L 5465490 5465897 GGATAAGAACGGACAGATCG 58 5465957 5465975 GATTCGACGGAATGCTCTG 58 NA Drosophila melanogaster 61 Cyp28d2 FBgn0031688 FBtr0079061 1 1 1 84 2L 5207896 5207914 GTTCGTGTTAACTGGCGAC 60 5207962 5208037 ATAAACGGCCTTGACTCGA 59 NA Drosophila melanogaster 61 CG14036 FBgn0031677 FBtr0079029 3 1 1 61 2L 5054762 5054782 GGAGTGTGACTACTATCTCCG 59 5054721 5054739 GACTACGAAGCGCTATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 1 2 2 80 2L 4933956 4934027 CGAGCTCAAGCAGAAATACC 59 4933895 4933916 CAAACAATGACGAAGAGTAGGG 59 NA Drosophila melanogaster 61 CG3285 FBgn0031522 FBtr0077586 3 1 1 82 2L 3331870 3331892 GTTCGAAGAGATGAAGTATCTCC 58 3331928 3332011 GTCTGGTTATGAAATCTCTGTAGTC 59 NA Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 3 1 1 82 2L 2870910 2871005 CCATCTATTAAGAAGTTCTTGGGTC 59 2870852 2870871 ATTAAAGCAATGGTCTCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692,FBtr0077691 2 2 2 83 2L 2837277 2837355 ATGACGATACGTACGTGGTC 59 2837213 2837231 TGTAGCCAAAGAAGACGGG 59 NA Drosophila melanogaster 61 ast FBgn0015905 FBtr0077952 1 1 1 82 2L 1078495 1078513 CAGTGCTCTCCTACGACTC 59 1078557 1078633 GGTGAGAACCTTAACAGTCAG 58 NA Drosophila melanogaster 61 CG13693 FBgn0031235 FBtr0078126 3 1 1 72 2L 233145 233226 GAAAGAAATGCCATGACCGA 59 233261 233279 TTTCCTCACTTCGAAAGCG 58 NA DesignRelaxed Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733 2 1 3 189 2L 74558 74906 GGAGGTTTGAATGAGGCCT 59 75118 75136 GATTAATGTGGAGCGCCAC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 1 3 10 93 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111109 112700 AACATGATACCCTGGTCACC 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 3 4 4 80 2L 123790 123873 CTATTACGATCCTATCATTCCCG 58 123732 123750 AGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 2 3 3 81 2L 740677 740807 AATACTAGGACTCTCCTTACGG 58 740617 740635 CATAAACAGTTCGCCAGGA 57 NA Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 1 2 2 80 2L 1161973 1161991 CCATCAATGGGATCTTCGG 58 1161854 1161929 TGTACTTCTCCTCTTGCGT 58 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 1 1 2 107 2L 1344490 1344508 AAGAGCCGGATAGACAGAG 58 1344633 1344651 GTCAGCGTTCTTGATCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943 1 1 2 80 2L 1359691 1359772 GAAGATCTTCGTCCCTGCA 59 1359629 1359647 ATATTGGAGGGACAGGCTC 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 1 6 6 126 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 3 4 4 82 2L 1695513 1695531 AATCGGAGCGAAACAATGG 58 1695575 1695657 GGCTCCGTTATCTGTAGACTC 59 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 1 4 4 81 2L 1694370 1694388 ATGTACAAAGGCGAGGTCC 59 1694432 1694556 GACCTTTGACCTGCAAACTC 59 NA Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 1 1 1 64 2L 1883757 1883775 GAATCTAAATGCCACCGCG 59 1883161 1883180 TGAGCTTCTGCATATTCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301067 2 1 3 163 2L 2017844 2026778 GTCCTCAGGAATCTCCTCC 58 2026905 2026923 GTTGGTAGTGATGCTGCAG 58 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 1 4 4 80 2L 2495423 2495442 TGATAACGCTGGAGTTTCAG 58 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 2 3 3 91 2L 3017840 3017862 CGGATTATTTATACCACCTGGAC 58 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 1 2 2 80 2L 3040725 3040796 CGTTCCTTCATACTGTCTTGC 59 3040837 3040856 GTCAATCCGGCATACAACAC 59 NA Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 2 2 2 80 2L 3067256 3067275 AAGACGAATGTGACCTTGGT 59 3067318 3067397 TGTGCAGACCTCCTTAAGG 59 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641,FBtr0112639 1 2 3 90 2L 3368181 3369125 GGGTTCTCTGGATTAAAGATAGTG 58 3368114 3368132 CAACTGCTCGAACTTTCGG 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 2 5 11 179 2L 3626211 3626349 GAAGCAGAGAAGGATGGAC 57 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504 1 1 3 95 2L 3869790 3869880 CAATCCCTACAATGATCAAACG 57 3869936 3869954 ATCAGAGTCTCCGGAACTG 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 4 5 112 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473872 4473890 CCTGTGGTTGCATGTAGAG 58 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 2 4 4 78 2L 5221390 5221471 TTTCTCATGTGCAAGGTAGC 58 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 2 4 4 78 2L 5221390 5221471 TTTCTCATGTGCAAGGTAGC 58 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 3 3 3 108 2L 7057578 7057596 ATCGAGCTGTCTTTGACGA 59 7057668 7057875 TGTCATTTCCACCTGTCGT 59 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0079405 1 1 2 99 2L 7182811 7182829 AAGATAGCGAGGACGAGGA 59 7182889 7183173 TACTCAATGATCTTCCTCTCGC 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 1 4 4 80 2L 7444382 7444469 CATTATCGATATGGAAGGGCTG 58 7444509 7444528 ATGTAATCCAGCAACATGGC 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079510 2 1 5 80 2L 7696802 7698740 TATCCTTACAACACTGGTCCTC 59 7696743 7696762 ATATCTTGGGCGGGTAATCC 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185 2 1 3 80 2L 7986073 7986146 AACGTAAGTTTGCCTACCAC 58 7986187 7986207 TACGGTTCTATTCTGTTCCAC 57 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 3 4 5 84 2L 9535897 9536002 CTATATCGATCACTCCCGGC 59 9536049 9536067 ACCACCAGCAGAATGACTC 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 4 7 80 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256495 10257402 ATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 4 7 80 2L 10257441 10257462 CACATGTAAACAATCCTCTCCA 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994 2 1 2 89 2L 10340803 10340879 GCTACTGTGAAATCTGGTATCG 59 10340929 10340947 TCCATTCATGGAGTAGCCG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 1 5 6 80 2L 10399673 10399772 ACAGGTATTGTAAATGTCGCG 59 10399813 10399832 ACTTGAACCATTTGTACCCG 58 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0112856 1 1 4 80 2L 11142405 11142784 CCATATTCGCGACATTTGCT 59 11142344 11142364 AAGACACGTTGATGATATGGC 58 NA Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 2 3 3 152 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524487 11524574 ATAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 1 3 5 80 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271635 12271653 TGTATGGGACTATTCGGCA 58 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 2 4 4 122 2L 12385730 12389197 GAGCTATAAAGGCCCTCCA 58 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899 1 1 2 97 2L 12433698 12433842 CGCTTAAGGTCGACAATCTC 58 12433620 12433639 CCTGGGTATGTAGATGTCCC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090023,FBtr0090026,FBtr0090022,FBtr0090029,FBtr0090025,FBtr0090014,FBtr0090024 1 8 17 91 2L 12724261 12724279 GTGACAAGGAGATTGCGAC 58 12724333 12724773 TAATGAAACCAGGAACGGTG 58 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 2 3 3 247 2L 12976592 12976610 CTACAAGGTCGACGATGTC 57 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440 1 1 4 94 2L 13208769 13209502 AGAAAGAAGATTCGGCAGC 58 13209558 13209578 TGACTTTCCATCACTGAACTG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 1 3 9 80 2L 13274314 13274338 GTATCATACCGATAACTCTAGAGCA 59 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 3 3 3 80 2L 14062614 14068877 TGCTAAAGTTTGCCTAGCA 57 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080600 1 1 2 80 2L 14163141 14163216 AGAAGCTCAAGATGATCATTCG 58 14163082 14163100 TTTGCGTGGTTGAAATGGA 58 NA Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 2 2 2 60 2L 14618425 14618446 CATATAGTGCATCCAAATTCGG 57 14618467 14618536 TAAAGAGGGTCCGCTAGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 3 5 5 81 2L 14984076 14984210 GTCTAGTCATATTAATCACTCGCC 59 14984018 14984036 GAGAAGGCTTTGTATGGCG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080777 1 1 5 102 2L 15730825 15731010 ATTGAAATGGACCCTGAACTC 58 15730743 15730761 CAACCGATGACAGATTGCC 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090006,FBtr0090004,FBtr0090005 3 3 4 80 2L 16186139 16189034 CCATATAACAATGTCTACGCACC 59 16189074 16189092 GTAGGGACTAGCTGGTGTC 58 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 2 1 4 131 2L 16622736 16622754 GAATACTACATCGCACCGC 58 16652750 16652768 CTGGGAGACCATCTGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 2 3 4 80 2L 16692113 16696593 TCGATCGAATAGAACCAGACG 59 16696635 16696653 AATTGAGTCCGGACAGGAG 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940 2 2 3 102 2L 16724132 16724150 CAAGCAGATCGTGATGCAG 59 16723888 16724069 CAGGTATTCCCAATTGTGTACC 59 NA Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 1 2 2 82 2L 16844728 16844746 CCAGGGTATCAACCTGGTG 59 16844605 16844685 CTTTGTACTGGCTCTCAATCTC 58 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969 3 1 2 84 2L 17370896 17370916 CGATATTAAAGCACGATTCCC 57 17368378 17370853 CAAATTAGATTCAGCCAGAGGA 58 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 3 2 2 91 2L 18081785 18081862 ATTATGAAGGCCTTGCCGT 59 18081911 18081935 CAAAGATACATGTAGACATACACCG 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 1 5 5 149 2L 18320723 18383414 CTTAACAGATGCACTCACCTG 59 18383525 18383543 TTGAGTACCTTCTGCTCGC 59 NA Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 2 2 2 80 2L 19186184 19186263 GCTATAAAGAGAAGGCAAACGA 58 19186303 19186322 ACTCGAATATCCAGGACGTG 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 1 5 7 114 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569163 19569185 GGTTTCTCTACATAGGTATGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800 1 1 2 81 2L 19643364 19644273 ATCTCACACGTAAATCCGC 58 19644318 19644336 AATAGAAGCTAGCAACGCC 58 NA Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 1 2 2 80 2L 20074332 20074787 CGGACACAACTATACAGTTGAG 58 20074273 20074291 AGCTCGGTGATGTTTAGCA 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 2 9 9 90 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877068 20877156 AGAAATATACTGGGTACTCAGTCC 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081484 1 1 3 125 2L 21275623 21275643 GGGTCATTCAAGAAATTCCAG 57 21275797 21281140 CTGGGATTCCTAGCATGTC 57 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 1 2 5 80 2L 21618106 21618511 GCATTTCAATAGCAATGCCAC 59 21618046 21618065 CAGGGCCCAGTTAGATAGTC 59 NA Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 3 3 3 143 2L 21627752 21627854 GGTGACTCAACAGATGCTC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085901 2 1 4 88 2L 21719635 21725078 GAAGACGATTTGCTATGGCC 59 21725129 21725147 TCAATGCCGAACTTAAGCG 58 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 1 2 3 95 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648241 20648433 GGTTTCAGCATTATAAGTGTGG 57 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269 3 1 2 131 2R 126656 130278 TGATATTGAGGAGCCTCCT 57 126543 126562 TCCGTATATGCAGTAGTTGC 57 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 2 3 3 80 2R 1195091 1195109 AATCCGAATTCAACAGGCA 57 1195152 1203787 CAACTCGAGTAAACCGACTG 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0086030 3 1 3 98 2R 1867139 1867449 CTGTGACCAATTTGATTTGAGC 58 1867062 1867081 TTCTTGTTTGAACCCGACTC 58 NA InUTR Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0086012,FBtr0086008,FBtr0086010,FBtr0302439,FBtr0086009 3 6 6 80 2R 1981451 1981531 ATCTCAGGCGTATAATGAGTC 57 1981391 1981411 TGGTTATCTCGGTTATATGCC 57 NA Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 1 1 1 60 2R 2704215 2704233 CTCGCAACTTCACTGTCTG 58 2704320 2704338 CCGAACAATACGGGTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577 2 1 6 124 2R 2822602 2822727 CAACACAGACTTCGAATGCA 59 2822497 2822515 GTATGCCGTCGAAATCGTG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 3 3 6 96 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814241 2814259 CTTCGCGTTGAGATTCTCG 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 3 3 3 164 2R 3106660 3107963 CGCATGATAACGAGGTTCG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111067 2 1 59 93 2R 3249289 3249307 TACAAGAGCTACCAGTGCC 59 3240519 3249232 AGATGGGCTCTGTGATGAC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111054 1 1 59 80 2R 3249269 3249287 AACCAAACATCGTCTGACC 58 3240855 3249225 CTGCTCGAAATAGGCTCTG 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 3 8 8 139 2R 3287484 3287505 TGCCTCATACAGTTTATAAGGG 57 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088914,FBtr0088915 2 4 6 95 2R 3538422 3538442 ATTCCATGCCATCTGTTAAGG 58 3538499 3538583 CTATTCTAACCTTGGCCCG 57 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300780 1 1 5 126 2R 3565600 3565620 AATCAGCAACGAAATCCTCAG 59 3565231 3565514 TAATGTCTCCTCGAATAGCGT 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088935 2 1 3 84 2R 3616576 3616594 CAATAGCATATCGGAGCGC 59 3616452 3616528 AGTGCGGCATTCTTTAACC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 1 9 9 80 2R 4566363 4566440 AGTTGCTCATTGCATCACC 58 4566484 4566502 AGCAGCGTCTTAAACTTGG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 2 9 9 80 2R 4568218 4568302 TCATGGACTACCGTGATATGAC 59 4568342 4568361 CTTCCCAGTTGACTAGACGG 59 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301193 3 1 3 130 2R 4898914 4899028 GCTTTCCCGAATGATACCG 58 4898802 4898820 AACAAGACCAGATCATGCC 57 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 1 3 3 115 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0088450 3 1 2 82 2R 5778795 5778813 CGAATGTGATGAAGGGCTG 59 5777232 5778751 ATCCTTCGACGTGTAATAGGA 58 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 2 2 4 80 2R 5782126 5782146 CTAAGCGATGAAAGTTGTCTG 57 5782187 5782261 TATTGGTCTGTTCTCTTCGG 57 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444 2 1 5 98 2R 5805513 5805532 ATCTTAGCGTACTGAGCCAC 59 5804409 5805454 TAATGAAGTCTGGAGTGGGTG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993595 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 1 16 17 80 2R 6192538 6192559 GATTGATGCCAACTGGTATGAG 59 6192597 6192987 CGACTGACAATCTCAACATAGC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 3 3 17 104 2R 6180370 6180858 GATCAGAACATTCGAACGCTC 59 6180924 6180942 ACTTCATTGGGCCTGTAGG 59 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290090 2 1 2 86 2R 6221197 6221215 CGTATCCGCAATCGTATCC 58 6219864 6221149 TTTCGCTAGGCACAAATAGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089352 2 1 26 159 2R 6419732 6419750 CATGACAATGGAGGAGCTG 58 6413354 6419548 CAATTCGAGCAGACCTTGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 2 3 3 180 2R 7467665 7467748 GAAATGGAGCTTCATGAGGA 57 7467439 7467457 TATCGAAGATCTGACGCAC 57 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025,FBtr0088024 2 3 3 85 2R 7914602 7914620 GCTGGTCTTCTTCAACGAG 58 7914479 7914555 GCGTGCAATTATCTAGTTTGC 58 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917 1 2 3 80 2R 8274922 8275426 GGATAATAATGGCCGGAGTG 58 8275829 8275847 TCGCTCACATGTCTGTAGG 59 NA Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 1 2 2 80 2R 8320535 8320555 AAGCAGTTCAAGTACGATCAG 58 8320418 8320493 TACTGTGACGCTCTCATCG 59 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 1 2 8 80 2R 8504431 8504969 CTGATTCAGCCAAATACTACTTGAG 60 8505007 8505025 GCAGAATATCCTGCTCGGT 59 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 1 2 4 115 2R 8745742 8749271 GGATGTGATTGAAGCAATCAG 57 8745647 8745665 CACGGGTCAGAAATACAGC 58 NA Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 2 2 2 80 2R 8887549 8887665 CTTATAAGCTTATCCCTGGAATACC 58 8887702 8887721 CAGGTAAATAGTGGGAGGCA 59 NA Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 1 2 2 63 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108847 9108866 GGATACTGTGGGATAGAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 3 1 1 71 2R 9280195 9280215 ACTATTTATCGGAGGTTCGGG 59 9280058 9280076 GTTTCTTCCTCTCATGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 3 5 12 92 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9303452 9306500 TTTCCGTGAATGAAGATCGC 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087703 3 1 6 139 2R 9333088 9337689 AGCATAGACGACACCAGTC 59 9332559 9332577 TCCTCCAATTCGCGTACAG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 1 3 15 80 2R 9770046 9788956 GCATACGAACTAGATCAAGCAG 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0273225,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301591 3 11 15 83 2R 9770040 9781642 GGATCAAGCAAGCAGTATTCG 59 9769977 9769995 GTTCCACAGTGGTAACCCA 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0273225,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301591 3 11 15 84 2R 9770040 9781642 GGATCAAGCAAGCAGTATTCG 59 9769976 9769994 TGTTCCACAGTGGTAACCC 59 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 3 3 3 138 2R 9849830 9854266 CATACGTTCAAGCTGGAGC 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795,FBtr0112796,FBtr0290035,FBtr0087527,FBtr0290034 3 5 8 96 2R 10064188 10064692 ACAAGAACTATCTGCTAGTGGA 58 10064749 10064767 TTGGTCAACGTATGGTGGT 59 NA Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 1 1 1 89 2R 10098815 10098836 TCATATGATCACGAACATCCAC 58 10091512 10091530 GTGACTGTACTCCGGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 3 3 4 86 2R 10661508 10662487 CAATTCCACGTCAAGGGTC 58 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 2 3 3 104 2R 10865420 10865744 CTCATTAAGGTTCGCCAGC 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007 1 1 4 101 2R 11027513 11027531 TAAAGGTGCACAACAAGCG 59 11027596 11027989 GATTATCGTGCGGATGCAC 59 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289 3 1 2 94 2R 11743990 11744011 GATGAGTTTGACTTGTTGATCC 57 11744066 11744144 TCCAGAATGACATTGCCTG 57 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0302149 3 1 5 134 2R 11825288 11825306 TAACTACGTGAGCTCTCGT 57 11824820 11825190 ATACGCCAATCTCTTGGAG 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 106 2R 12677130 12677224 GATCAGTACAAGCGCTCTC 58 12677294 12677312 GCCGGAGTAACTACTTCCA 58 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 1 4 4 87 2R 12746191 12746209 CTCCAGCTCTGACGATAGC 59 12746259 12746340 AGGATTGTAATCTGAGCCCG 59 NA Drosophila melanogaster 61 CG6421 FBgn0025827 FBtr0087043 2 1 1 68 2R 12759860 12759878 CTTCATTGGTTCAAGGCCA 58 12759967 12759985 AAATGCAGGTGAGACACAG 58 NA DesignNoJunction Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603 3 1 8 88 2R 13409395 13411012 TTCCAGAGATTCGGGACTG 58 13408422 13409344 AGAGTTTAGGACCTGAAGCG 59 NA Drosophila melanogaster 61 CG30108 FBgn0050108 FBtr0273298 1 1 1 66 2R 13557115 13557133 GGGTTTATCAGGAATGCGT 57 13557214 13557235 GGATCTATCTCTTGCAAATCGA 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 3 2 2 80 2R 14055629 14055716 GCCAGAGCGTTTCAAATCC 59 14055758 14055778 TTAAGCTCCTTCTTCACTCCC 59 NA Nonspecific Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 2 3 6 81 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169009 14169144 CATGTAATACCGTCTCAGCTC 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0301148 2 1 8 163 2R 14309052 14311643 GAGGACCTTTATAATACAGCCA 57 14311841 14311859 TTGATCTCTTCCTCAACGC 57 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 3 4 4 81 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529502 14529522 CATCATGGTATTTAGCTCGCC 59 NA Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 2 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587567 14587587 TGTTTGATAGTGTATCGCCGA 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290311 3 1 12 121 2R 15061862 15062396 GCATTTAAGTTTGGCCAGC 58 15062481 15062499 AGACTGTTATATCCGCCCG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 1 3 12 80 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 1 5 12 80 2R 15062801 15063698 AGCAATTCACTTGGACCAC 58 15063739 15063760 CGAGGATTCTGAAATTGAGGAG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 1 2 4 80 2R 15196577 15196597 GACAAGTCGCTTACGAATCTG 59 15196006 15196535 CGTCACGAAGATCACTGTG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 2 10 10 80 2R 15298012 15298105 CAACAAGAGTCACTTTGTCCT 58 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 1 2 6 121 2R 15461674 15461692 ACATTTATGCCGGATGCTG 58 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 1 2 2 93 2R 16231426 16231450 CACACTGAAGATCAATAATGAGGAC 60 16231498 16231577 CTTTCTAATACGATTGCGGGAC 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220 1 3 5 81 2R 16493289 16493309 GATCGTATCATCACCATCTCG 58 16493352 16493962 CATTCTCGTGTACGCTCTG 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 1 4 5 175 2R 17202260 17202341 ATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 1 2 4 84 2R 17222089 17224945 AGTAATCAGGTCTGGATATCGC 59 17225051 17225069 CGTTATCGTTGTCTTGCGG 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 2 2 2 60 2R 17557068 17557088 ACTTATCTACCAGACGCATCC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Tim10 FBgn0027360 FBtr0071677 3 1 2 83 2R 17578527 17578548 CACACTTAGCTTTACTACATGG 57 17578465 17578483 ACAGCACAAATGCGTAGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801 1 1 2 112 2R 17960544 17960562 TACTACACCTTCCGTGTGC 59 17960380 17960468 TCAATATCGGTACCCACCG 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 3 3 4 83 2R 18223212 18223230 CAGCACTATGCCACAACAG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0302117 3 1 8 107 2R 18615274 18616645 TGAAGAACTATTCCAGCTACGA 59 18615188 18615208 CGTCTGAACTTGAAAGAGGTG 59 NA InUTR Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 2 3 3 85 2R 18764361 18764448 GCAGGAATAAGTCAGTGAATCG 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 3 8 13 141 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814812 18814832 CGTGAATGTTTCTATGCAGGT 59 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 2 3 3 80 2R 19279311 19279329 TCGTCATTCCCAAGGACTC 59 19279182 19279267 ATTTGTTGATGGACACCGG 58 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 4 5 115 2R 19468991 19484433 GGTCAACAAACAGTATTCGG 57 19484508 19484591 GTGTCATTTCCGTCTTTATGTC 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 3 2 13 90 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564635 19564653 ATCTGCGGACTGTAGAGTC 58 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0100330 3 1 3 84 2R 19644991 19645009 GGATGGTCGTTGTACACCA 59 19644062 19644945 GCTGCTGGTTACATTGTAGAC 59 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 3 4 4 80 2R 19801154 19801172 AGCACAGTCTACTTGTCCA 58 19801216 19801293 AGACTGACCGAATTTGTCC 57 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 2 3 3 80 2R 20398305 20398384 TTCGTAAGGTGTTGGAATCC 57 20398244 20398263 CAAGCAGACTGATGAGTTCC 58 NA Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 1 1 1 61 2R 20556264 20556284 TGAGAATATACAAGAGCTCGG 57 20556167 20556185 TCCAATGGGTAGTTGGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 2 1 1 74 2R 6151192 6151210 GTTCAAGTCACACCCATGG 58 6151073 6151092 TTGTACTATTGCTCAGTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 3 2 2 95 3L 317318 317337 CTATCCCAGGACTGATTTGC 58 317393 317466 CGTTCTGGCTCAAATAACCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 3 2 2 80 3L 364838 364858 AAGGAGAGTAAACGCTACTCC 59 364900 364979 GGTCTGAAGGTGTATCCGA 58 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 1 3 3 113 3L 679818 679905 GAATTTAGCGACCTGGCAG 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 1 2 2 127 3L 1253219 1253309 CGAGTTCGATAGAGAATGCC 58 1253399 1253417 TCTTCTCCTGGATGAAGCG 59 NA Nonspecific Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 1 4 4 110 3L 1551790 1551871 TATGTGGACGAGATCGTCC 58 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 3 3 3 81 3L 1573237 1573258 TACCAGAACTTCTTCATCTGCA 59 1573300 1573555 GTGCGTAGACCTGATAGGG 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776,FBtr0301580,FBtr0072975 3 4 4 161 3L 2925330 2925348 AAGGAGAACGTTCACGAGG 59 2925473 2940795 TATCACTGCGATAACCCGG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 1 4 4 71 3L 3054202 3054220 TCCAGATACGAACGATGTG 57 3054321 3054339 GACCGATAATCGTTCACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115 3 1 5 105 3L 3131199 3142840 GAGTGTCTTCACGAGTTCC 57 3131112 3131130 TATTATGGGCATCGTCAGC 57 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 3 4 4 80 3L 3365741 3365818 AGTCCATGAAGCAACAGTC 57 3365860 3365880 AGTTACGAGAACTAACTGGTG 57 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017 3 1 4 110 3L 3350329 3351509 ATCGTTGGCATCACAATATGAG 59 3351580 3351598 TCGAACTTGATGATGCCGT 59 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 1 1 1 60 3L 3471947 3471967 TTTCATCCTATTTGGAGCCGT 59 3471837 3471856 ATGCTTCAGGACTATGGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073198 2 1 2 85 3L 4032071 4032090 AGCCATTTGTCTGTTCATGG 58 4032135 4032203 ATTATCAGAACATGCCCAATGG 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 1 3 6 94 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095864 4095983 TGGTAGTATTCCTTCATCGAGTG 59 NA Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 1 1 1 60 3L 5771067 5771085 AATCCCGTCTGGATTTGCT 59 5770967 5770985 TGTACATGAACGTACCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 3 1 1 60 3L 5898845 5898864 CCTACGATACCTGCTTTACG 58 5898723 5898742 TACTTGGGACCCACATACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 2 2 2 80 3L 7061622 7061640 GTATGTGGTTCTCGACGTG 58 7061496 7061580 TACATCAGGAACATCATCACC 57 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 2 5 5 99 3L 7333783 7333801 CAGAGATCGCATGTACGGT 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 3 3 15 122 3L 7689773 7689791 CAACTACAGAGTCGACCCT 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 1 2 2 67 3L 8115190 8115208 TACCTGGATATGTGCTCCT 57 8115294 8115312 AATATGGTCAGCACTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 2 1 1 122 3L 8185522 8185542 GTTCGATTCGGATAAGACGAC 59 8185333 8185351 AAGTAGCGCAGCTCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 2 4 5 180 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347120 8347138 CTTGTGAGAGTACCAGCGA 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 1 5 13 115 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630550 8630568 CTGGGATCGTACTGGACAG 59 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300208 1 1 2 84 3L 8889435 8889960 GCTTTGAATACCATGGTAACAC 58 8889372 8889390 AGTTCCACTTCATCTGCAG 57 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 3 2 4 82 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330140 9330160 TCAGACCATGAGAGTTCTTCG 59 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 1 3 3 81 3L 9581537 9584351 CAAGAAAGAGCACTTGGCC 59 9584393 9584414 CGATGGCATTATATCCAAGTGG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935 2 1 2 105 3L 9829382 9829400 ATTCACGATTGTCCAGCAG 58 9829233 9829314 GCTATCTGTGTTACGTCAGG 58 NA Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 2 2 2 80 3L 9862408 9862552 CTGGATCACATTAGGAACAAGG 58 9862591 9862611 ATTCAAATCTATCTCGCGCTC 58 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113418 3 1 5 111 3L 10580989 10581771 TATTAAATCGCCGCACTGTG 59 10582469 10582487 GACAGCGGAGTCTTTAGCA 59 NA Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 1 1 1 76 3L 10872395 10872413 TGAGACTTTGTTGGCTTCG 58 10872503 10872525 TGAAACCTAGTATAGAGCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 2 2 2 81 3L 11075550 11075633 GACTTCAGAATATACCTTGTCGG 58 11075491 11075509 AAATGGCATGTGCCATAGG 58 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 2 3 3 86 3L 11152077 11152408 TACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 3 1 2 87 3L 11246020 11246039 AATCATCTACGGTAGCCTGC 59 11246831 11246849 CAGGTCCAGAGTGTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 3 4 4 100 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600359 11600377 GCATTGTAGTGTGATCCGC 59 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 1 3 4 88 3L 11992086 11993380 TGCGTGAGATGTTCTTCGA 59 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 1 4 6 118 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 1 3 4 87 3L 12558038 12558056 TAATTACCAGGAGCTGGCC 59 12534466 12541585 GTGTAGAGCGGTATAGCCC 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 3 3 5 142 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474448 AACCATCTGGGATATACTGGC 59 NA Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 1 1 1 90 3L 15490342 15490360 CGACTCCATCAGTCCACTG 59 15490482 15490500 TTCCCTCTTGGCTAACTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414 2 1 2 155 3L 16390170 16390188 GACTCTTTGGTAAGCCCGA 59 16389676 16390054 TAGCAATGATAATTTGCTGGGC 59 NA Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 1 1 1 74 3L 16464696 16464716 AGGCTACAGATATCTGTTTGC 58 16464574 16464592 AACAATTTGCACGGTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 1 3 10 81 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926098 16926397 GCTGCTTCTGAATTTCGAC 57 NA Nonspecific Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 2 4 4 80 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391566 17391587 GAATGGAGTTAGAAAGGTCAGC 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 1 4 4 80 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391566 17391587 GAATGGAGTTAGAAAGGTCAGC 59 NA Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 3 2 2 186 3L 17670665 17676047 TGAGTTTCAGAGTGTGCCA 59 17676195 17676215 TTTGTTGACCTCATAGCACTG 58 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 2 2 2 83 3L 17746409 17746577 TTGTTCCCACGCTATATGAC 57 17746345 17746363 ACTTCTCCAAGGTTTCCAC 57 NA Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 1 2 2 60 3L 19612400 19612420 AGATGATCTATGTAGGCTCGG 58 19612442 19612460 TATATGGTGTCCAGCACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 2 6 6 144 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684742 19684912 GATCCTCATCGACAGAGCA 59 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 1 3 3 81 3L 19789421 19789441 GCCACTATGACAGTAATGACG 59 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 1 5 5 80 3L 19795361 19795441 GGCATGTATTTGTGGTACGA 58 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302712 1 2 5 155 3L 20150311 20151587 CCAATGTGACTGAGAAGGGT 59 20150175 20150193 GAGTGGGTGAGAGCATCAG 59 NA Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 3 2 2 84 3L 20386314 20386386 GAACAGAGAAACCGAAGACG 59 20386249 20386267 GTCGTTCGAAATAGGTGCC 59 NA Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 3 1 1 102 3L 20403363 20403381 TTCGACATCGCTCTATTGG 57 20402671 20402690 ATAATATGATCCCGGGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 1 2 4 70 3L 20764900 20764918 ATGGTCAATTCGTCTGGCA 59 20764952 20765710 TTTGGCCTGTGATAGTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 2 2 4 71 3L 20764899 20764917 AATGGTCAATTCGTCTGGC 58 20764952 20765710 TTTGGCCTGTGATAGTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 2 2 2 99 3L 20783888 20783907 CATATCCAATCTCACAGCCG 58 20783742 20783826 CATGCACTGGATCTGATCC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038 2 1 4 145 3L 21061266 21061820 TAATTGGCGAAAGCTTTCCC 59 21061926 21061946 ATTCTGCAGGTAAACATAGCC 58 NA Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078563,FBtr0078561 3 2 2 152 3L 22939656 22943635 CATCAGAGAACGAAAGGGC 58 22943749 22943769 TCGTTAAAGGAATTGGACAGC 59 NA Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 1 2 2 80 3L 23087935 23088013 GCTGATAGGCTTCAAACTGG 59 23087874 23087893 GGGTTGACCAATACGAACTC 58 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0100617 2 1 4 110 3R 151197 151425 TCAACGTATAATTGCCCTTGAG 58 151496 151514 GATAGCGTTATGTCCGCTG 58 NA Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 1 2 2 87 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216887 216905 TTGGCCGTACAATAATGCT 57 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 2 4 4 89 3R 293415 293433 TCTACTACATGATCGCCGC 59 293285 293365 CGAATTGAACCATTTGGAAGGT 59 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823 3 1 2 102 3R 1077213 1077231 CAGTTGCGCTTGTATTGCT 59 1069960 1077148 TCTGAAGATTCCGTGCTCTC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 1 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 1 4 19 132 3R 1129894 1138718 AAGAACAGGTCACGTAGGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 2 3 4 96 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385832 1385850 TACCCTGGTAAATGCGCTC 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 1 3 3 80 3R 1392050 1392070 GGAAACTCTAATGCGAAGCTC 59 1392107 1392198 CTCCAACTTGAAGAAGGTAATGAC 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 1 4 4 133 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 1 3 3 138 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499227 TGCCGAACATATCGATGAG 57 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 1 4 8 80 3R 4660661 4661007 CCATATACGGTACCCTACGA 57 4660600 4660618 GATGCTGTACTTGCTGGAG 58 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 3 4 4 93 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871871 4871889 CATTGCTGTATACAGGCGG 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 2 3 5 149 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 1 2 2 96 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088726 5088807 GATGGCAATCCTCAAACTCTC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 3 2 14 96 3R 5262830 5269741 GCAAAGCTTCTGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 3 3 3 97 3R 5284386 5284405 GATCAGCCTGATCAAATCCG 58 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082041 1 1 3 80 3R 5284486 5286003 CCATAGCCAAGCCAATACTC 58 5284425 5284443 TCTCCTTCAGGTTCATCGC 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 2 3 3 95 3R 5284385 5284403 TCAGCCTGATCAAATCCGG 59 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 1 2 2 113 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597851 5597930 ATCCACTTTCTTCAGCTTTACG 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082196 3 1 6 101 3R 5930696 5930798 GAATCAAGGATCAGAACATACCAC 59 5930618 5930638 GATACTCCAACAGCACTTTGG 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 2 5 5 80 3R 6041340 6042793 GGGTGGATGAGATATCCGAG 59 6042836 6042854 ACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 3 5 5 90 3R 6041343 6042795 TGGATGAGATATCCGAGCT 57 6042847 6042867 GCGCTTATGATATACTCTCGT 57 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 1 2 8 92 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359651 6359669 CTGAGGAATACAATCGCCG 58 NA Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 3 1 1 78 3R 7498789 7498807 CCAGCCACGAGATTAATGG 58 7498952 7498970 GAACAGTGAACGGTTAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 3 4 4 76 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646919 7646937 GCTTATTGGTCCCTCTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301042 1 1 2 97 3R 7717506 7717585 TCAAGCTTCTAACACAGAGAC 57 7717644 7717662 ATCTTGACTGGCTACAGCA 58 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 2 2 2 69 3R 8529488 8529506 CATCTTCAATGGGCTGGGA 59 8529601 8529620 TTTGATGAGTTCCTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 3 2 2 81 3R 8901962 8901985 AGAAGACCCTGTATCAGTATATCC 58 8902025 8902131 TGTCCTTTGTACAGCAGGA 58 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 1 2 3 80 3R 9484276 9484366 CAACAAGGGTAACCAGGGT 59 9484214 9484232 ATATTTCCACCCTGGCCAC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 1 8 8 81 3R 9487885 9487905 ATTCGAAGACTATCGTGATGC 58 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 2 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 3 2 10 97 3R 11001975 11001993 TACTTGAGGGACAAGCCAC 59 11001576 11001917 ACTCTTATAGCCTTGTTGAGCT 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 2 5 6 87 3R 11024794 11024813 CACATTCGGCACAATTTGTG 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 2 2 2 145 3R 11143153 11143227 TCGAGTGGATTACCTGGAG 58 11143335 11143354 GGCTGTTGATGTAGTAGCAG 58 NA Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 2 1 1 110 3R 11165417 11165435 CAAGTCTGGGATTGAGCCT 59 11165232 11165250 TGGACACGGCATAGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 2 2 8 89 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782598 TAAATGCCAGAGCATCTTCG 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083215,FBtr0100595 1 2 3 190 3R 11827113 11827476 CAATTCGAGACGCTTGAGC 59 11827630 11827901 GCTTGCGTTTCTGAATGGT 59 NA Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 2 2 2 80 3R 12264485 12264505 ATGAGAAGGAATCGCTATTGC 58 12264364 12264447 CACTATTGTTCAGATCGAGTACG 59 NA Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 3 2 2 81 3R 12264485 12264506 AATGAGAAGGAATCGCTATTGC 59 12264364 12264447 CACTATTGTTCAGATCGAGTACG 59 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 2 4 4 80 3R 12474342 12474428 GGTAGACATTAAACGCTATGC 57 12474470 12474488 ATCACGCCCTTAAGAACAC 57 NA Drosophila melanogaster 61 CG14907 FBgn0038455 FBtr0113242,FBtr0083354 1 2 2 60 3R 12477491 12477509 CTGCTAGAGATCCCAAGGT 58 12477449 12477468 GCGTACATAAGTTCGTTCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347,FBtr0083349 3 2 6 84 3R 12558425 12558443 AGTGTCCTGAAGATCCGAC 58 12484786 12536293 CCATTTGTACCTAGCCAGTC 58 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 3 2 5 141 3R 12920462 12923769 ACACATCAAGCTGAAGTCAG 58 12920340 12920360 GTTCTCCGTTGTATTTGACCA 58 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 1 4 4 80 3R 13678336 13678354 ATCTGGTACGGAGTGATGC 59 13678397 13678747 CAAAGAGCATCCCAAGAACC 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 2 4 7 60 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834615 13834634 TTCCAAGCGAATTGTTTGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 2 1 1 77 3R 14046401 14046422 TGAATGTGGAGAAATTTCAGCC 59 14046523 14046541 TGGCCACCAGAAAGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0083586 2 1 2 83 3R 14191319 14191401 CAGATGTGACTGAGAAGTTAGC 58 14191257 14191275 TTGAACGAGTGCTTCTGGT 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 1 5 6 80 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229686 ACATCGCGTATCTTGACAC 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 3 3 14 92 3R 14340833 14340852 GGAACATCGAAACGGATGTG 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 2 2 2 131 3R 14677253 14677271 ATTTAACTCCTGGTGCGGA 59 14677087 14677159 CTTGCAAGAGATGTTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 3 2 2 131 3R 14677252 14677270 TTTAACTCCTGGTGCGGAG 59 14677086 14677158 CCTTGCAAGAGATGTTCAGC 59 NA InUTR Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 3 5 5 104 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751701 14751719 ACTGCGTAGATCCTCTACG 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 2 5 5 104 3R 14751506 14751633 GAATGATGATCGGTTCGAGG 58 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 2 4 4 98 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981432 14981451 CAGTCAAGCACCTTGTTCAC 59 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248 2 1 2 88 3R 15686429 15686447 ATGGTGTTCTCCACACTGG 59 15683397 15686382 ATAGGAGGATCATCTGCTATTGTC 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 3 3 5 80 3R 16367272 16367419 GATCGAAGACAGGATAATGTCC 58 16367213 16367231 TCGTTGAACTTTAGGGCCA 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 3 3 16 94 3R 17010983 17011004 CTTGATGTGCAATCCTTACCAG 59 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084069 3 1 22 84 3R 17200833 17200852 ACAGTCCCAGAACTACAGTG 59 17183073 17200787 GTACGCAACAGAACCTTGAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0114359 3 1 22 80 3R 17200833 17200851 CAGTCCCAGAACTACAGTG 57 17196939 17200789 GTAGGTGAGAACTTGAGCC 57 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 1 2 6 104 3R 17643797 17643881 GGTTATCGTTTGAAGCACC 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 2 2 3 80 3R 17692976 17693134 ATGACCAGGTCATACAGCG 59 17692914 17692932 TGCGTATCTCCTTCTGCTG 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0084169 2 1 2 103 3R 17801768 17821253 ATGAAATATCCCTAGAACGCG 58 17821316 17821336 TTGCTCCTCGATATTCAAGTG 58 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 3 2 5 120 3R 17897750 17900175 TGCTGATCATAGCGTAGGC 59 17900257 17900277 CTGTATCTCAATGAAACCCGC 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 2 2 3 80 3R 17957958 17958390 GACCAATCTATTTGAGGAGATGC 59 17958429 17958448 AATTCGGTTATCTCACGCAG 58 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 2 5 5 60 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18184313 18184331 GTCGAATGTAGTGAAGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 3 2 3 83 3R 18209068 18209140 TTATGCAACACGAATTTCCG 57 18209185 18209204 GTGCCTCTATCATCAGTTCC 57 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 1 3 3 80 3R 18217578 18217653 CATTGAGGGAATCTCCAACG 58 18217693 18217714 TTCAAATCGAACTCATAGACGC 59 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 3 2 3 132 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542763 18542939 GGTAATGCATTTGGATACTGC 57 NA Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267,FBtr0113268 3 2 2 80 3R 18555589 18555675 GAACTAACCATGGCCAATCG 59 18555717 18555736 AAATAGAAAGATGGCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 1 4 4 80 3R 18614228 18614309 ATAGTTTCTATGCGGATCCCA 58 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 3 3 3 103 3R 18878880 18878898 CGGAGGTCGATATCAAGGA 58 18878662 18878744 ATTCCCGGAGTTTAATCCCT 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 1 2 2 80 3R 19057608 19057628 TTCCAGTCACCTATGTGACAG 59 19057479 19057568 GCACATTGAAGGTTACATCCA 59 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390 2 1 2 194 3R 19062429 19062894 GTGCATTTCTATCCGGTGG 58 19059870 19059888 TTTCGTAACCGGATACCGT 58 NA Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 3 1 1 77 3R 19362195 19362213 CGATATCGAGGGAGTTCGA 58 19362083 19362101 ACTTGGTCAGACTCAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084591 1 1 4 84 3R 19869976 19869994 ATGCAGACGCAATACATGC 59 19869859 19869928 GTATGCAAGGGACTCCTCC 59 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0084620 2 1 2 80 3R 20212194 20215378 GAGACAATGATAGACAGCATGG 59 20212135 20212156 CTGGAAGTATTGACGACTTTCG 59 NA Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084702 2 1 2 122 3R 20662828 20662846 AGTCTGACCATGCTCTTCG 59 20662930 20663783 TCGTCCTTTAACAATTGGGAC 58 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 3 3 3 81 3R 20677647 20677717 GCTGTTCCTCAACCTACTC 57 20677759 20677780 CTGCTAAGAAGAAATTCCAGGT 58 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 2 2 3 154 3R 20677423 20677568 GAGCAACTATTGCTCAAGGAG 59 20677730 20677754 CTCGACGTTTATTAGATGTAGTACG 59 NA Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 1 2 2 97 3R 20874424 20874442 CAATACAGTCCCGAAGCCT 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 2 1 1 74 3R 21088552 21088570 GAAGAGTGGAAAGGATGCA 57 21088667 21088685 TTCTTCTCCTTACCGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 3 2 7 161 3R 21539672 21544127 CGGATTGGAATCAACTTGCA 59 21539345 21539366 TTACACATGAACATCAAGGAGG 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 2 2 7 153 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573920 21573939 TATTCATCCGGTGAACAGGT 58 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 1 2 2 106 3R 22186368 22186386 ATACCGCATCTCTGATGGA 58 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 2 2 2 85 3R 23069031 23069049 ATCCGAGTCACCAGTTTGG 59 23068902 23068985 CGTACTCGGTCTTATAGAACCC 59 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 1 3 3 80 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765495 TCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 3 4 4 111 3R 24146990 24147103 ATGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 2 3 3 80 3R 25073690 25073708 CTGAACCGACAACTTGAGG 58 25073565 25073647 GGTAACCGAGATCCATTTGG 58 NA Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 1 2 2 187 3R 25547146 25547374 AATGAGAGGCTCCCTTACC 58 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 2 4 5 82 3R 25653847 25653868 CTCATATGCTCTGTAAGAGACG 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0301073 1 1 2 80 3R 25696803 25696821 GAACTACGTCAGTGCATGC 59 25696861 25696972 CGTTGAGCTATTCTGAGAATCAG 59 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 2 2 2 80 3R 25777673 25777691 CGGGAGAATCTGACATCCC 59 25777547 25777631 CGATTTCTGGGTATCATTGCG 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 2 10 12 114 3R 26398692 26398710 CTGGTGGAGAAGAACTCGT 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 1 6 12 139 3R 26359221 26397540 ATCACTGAGACTTCTGCCA 58 26397642 26397661 AGTATGGTTATCTCCTCGGG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 8 13 153 3R 26420665 26420683 GATTGTAGCTCGCAATCCG 59 26419562 26420549 AGTAGAGTTTCTGGTCGGTG 59 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742 1 1 3 104 3R 26884331 26886799 CAACCCTTCGAATACAAAGC 57 26883635 26884264 GATTTGCGTTGCCTTTCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 3 3 3 101 3R 26991969 26991989 CGGGCTATGGTTTACTTTCTG 59 26989348 26991908 ATCAATGAATCTGAGCTGTCG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 3 3 6 92 4 637969 638983 ATTTAAACGTGACGACGCC 59 639033 639057 CGAATTCCCTTATAGCTTGATTAGG 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 2 3 3 130 4 645479 645499 ACTAAGAGGCATAGTAAGCCA 58 645261 645280 CTGGAATATTCAGCTTGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 1 3 5 115 4 886473 886570 CACTTGGCAATAACCGCTC 59 886376 886396 GTATATCGGATGATAGGCCGA 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 2 4 7 148 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079843 1079865 GAAGCTCACTGTATGAAGAACTC 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0301563 3 1 8 87 4 1119576 1122570 ACTACACATGTCATGGAGGC 59 1122620 1122638 ACAATACGCTGACGAACGA 59 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 1 2 4 80 U 1352558 1352576 TCGTGGTACGACGTATTGG 59 1352620 1352690 CGCCTTTGAATAACCGTCC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 3 4 8 169 X 165636 166463 GATGTTGATTACACCACGCA 59 165424 165442 GTTTGAATGGTAGCACCGC 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 3 2 4 87 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516381 516475 AAGAAGCTCCCTGATATGCT 58 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 3 3 3 80 X 528075 528165 ATGAGCTCTTTAGGATAGACGTG 59 528017 528035 CATTTACCGTGGACATGGC 59 NA Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0070191 3 1 2 80 X 818946 819023 GCTATGAAGGCAATATAGGAACC 59 818888 818906 TGTCGCAGAAATCTTTGCC 59 NA Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 2 1 1 106 X 822301 822319 TGAAGTCCTATAATGCGCG 57 822445 822463 CTTCGAAATCTGGCTGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968 2 2 3 80 X 1127839 1127858 CGGACAGTGATGTTTACCTC 58 1120306 1120887 TGACCAGACTTTGCAACTC 58 NA Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 3 1 1 218 X 1374103 1374121 GACTCCTCGACGATAACCT 58 1375090 1375108 TTGAATGCCGTCATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 2 5 6 152 X 1383714 1383732 GACAAGCATGGCATCAAGG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 1 5 6 91 X 1383539 1383557 ACCATCATCTCAAGGAGCG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334 1 1 7 183 X 1965610 1965887 TTGTTGTGGAGAGTGGTGG 59 1965445 1965463 GTTGACGGAACCCATTGTG 59 NA InUTR Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 1 2 3 107 X 3373500 3373518 CTTTGATCGCTGCACTGAG 59 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100 2 1 2 101 X 3799925 3800250 AACTGGCAGTCGTAGTCTG 59 3799842 3799861 GTGTACGTGTAATCCGAGTG 58 NA Drosophila melanogaster 61 cib FBgn0026084 FBtr0070640 2 1 3 101 X 4003951 4003969 AACAGTCGATCTTCGAGGG 59 4004032 4004204 CTCCTTCTCCTTCCTTATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 2 4 4 153 X 4598142 4598235 CAACAACTACGGAATGGGC 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0299589,FBtr0290088 2 3 5 199 X 5097392 5097413 GCGCAGAATATCAAACATATGC 58 5111588 5115289 ATCTCGATGAGCAGGTCTG 59 NA Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 1 2 2 67 X 6571711 6571729 TATCCCTGGGACTATCCGG 59 6571586 6571604 TACAGATCATGATCCGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0112956 1 1 6 105 X 6702367 6702855 CATACAAGCCACGTTTGGG 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 2 3 7 99 X 8111097 8117668 CTAAAGCAATGGAATCGCC 57 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 2 4 6 88 X 8478536 8478554 TACTCGGAGATCCAGTCGA 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 3 3 4 89 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674564 TTCAAATAGGCAGGAACCAC 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 1 2 10 80 X 10692592 10692666 CTCTACGAATAAGGGTGAACTC 58 10692533 10692553 CGTCCAATCAAATTGTTGTGG 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073486 2 1 15 134 X 11284563 11288265 ATCTGGATTCGCTCCATAAGG 59 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 3 4 15 137 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299406 11299430 GGATACTCTGATATAAGGTCATCGT 59 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 1 4 4 119 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698381 11698399 TCTCCAATGAGACGCTCAC 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451 3 1 2 123 X 11775926 11777231 GTGACGATGAGACATACAGAC 58 11775823 11775842 AGATTCGCCTCAAAGATCTC 57 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 1 3 3 135 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466537 12466555 CTTCACCTTGACCTCCTCG 59 NA Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 1 2 2 60 X 13200438 13200458 GTTAGCGACTATTCGGATGAC 58 13200477 13200498 AGTATTCCATTTCCTCCATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 1 2 2 60 X 13280859 13280881 CAATTGATCAGTACCCGATTCAC 59 13280755 13280775 CCACACGCTTAAACAGATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 1 2 2 80 X 13314322 13314405 GCAAGAAGGTCAAGAGTTCC 58 13314445 13314466 TTATCTCAAAGCGGAACTTCTC 58 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 3 4 4 80 X 13726824 13726845 ATCCAGATATGAGCCAATTCGT 59 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 Ste:CG33236 FBgn0053236 FBtr0300085 3 1 1 60 X 13955424 13955442 AGTGAACTGGCAACATGTC 58 13955325 13955343 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 1 2 2 80 X 15350446 15350466 ATGCTGCTATTCTACAATGCC 58 15350327 15350406 GGTTACGTGATCGTATAGGGT 59 NA Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 3 2 2 80 X 15350444 15350463 CTGCTATTCTACAATGCCGT 58 15350324 15350404 CTTGGTTACGTGATCGTATAGG 58 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042 2 1 2 125 X 15381497 15381580 AAGGATCGTGAGATAGCCG 59 15397616 15397636 CACATTGGGCTCTTCATTCTG 59 NA Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 3 2 2 96 X 15601825 15601843 AAGGTGTCCGACGATAAGG 59 15601680 15601768 TGTATCGGAAATTCACGTTCTG 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 3 3 3 99 X 15744651 15744669 GTAACCTTAGGAGCACTGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 2 5 5 80 X 15749870 15749890 CTATAATCGCGTTGGAATGGA 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 1 2 2 80 X 15810713 15810826 GTGATTCTAAATGGACTTGGC 57 15810867 15810886 CTTGGTATCCCAATCTGTCC 57 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074302 2 1 2 105 X 16313074 16314092 GTATCCCTTCGGAACTCCC 59 16312987 16313006 GTCCTCATCTGTTCCAAAGC 59 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281 1 1 3 88 X 16344623 16345315 AGGATACAATGATCGGCCG 59 16345367 16345385 GATCCCGATCCTGGTTACG 59 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121 2 1 4 81 X 16377761 16377779 GAATTCACGATACACGGCG 59 16377129 16377716 AGTTGCCAATCATCGTTGC 59 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 2 2 2 106 X 16741015 16741035 ACAGCTTCTTAGAAGCAACCT 59 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074341 3 1 2 130 X 16778637 16778732 GAAACGATCAATCCCACGT 58 16778826 16778907 TACTGCAGTGCCTCATAGG 58 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443,FBtr0074441,FBtr0074442 3 3 3 82 X 17182011 17182029 CATCCAGGATTGGACAAGC 58 17181555 17181966 CAATTGCGGTAGGTCTTCTC 58 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 3 3 3 80 X 17462411 17462430 AACCAATTTACACGGAGCAC 59 17462282 17462369 CGGTCTTAACGTCTTCAGTG 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 2 3 3 80 X 17469920 17469939 GTTCAGTTTGGGTTCGAGAG 58 17469785 17469878 GATTATCGGAATGGGCTTGC 59 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508 3 1 2 148 X 17938963 17939208 GGATATGGAATCTCTTAACCCA 57 17939317 17939335 CGTAGTTCAACCAGAGTCC 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 2 2 7 80 X 18004586 18004605 CAACGCGTATACAGTTTGGA 58 18000953 18004544 GAGATCGTTGATCTCTTGGG 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 2 1 7 82 X 18006015 18006035 AGATACTGAAACTGGAGTCCG 59 18000947 18005973 GGCATTGAGATCGTTGATCTC 59 NA Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 2 2 2 95 X 19177103 19177121 ATTGCTCACTGGAGAAGCT 59 19176960 19177044 GAATGAGACCAATGAGCGG 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 3 6 6 154 X 19417821 19417839 GCACAAACACGATCTGGAG 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302864 1 1 6 80 X 19418178 19422673 GTCTGATAACGATGACAAGATACAG 59 19422711 19422729 TCCACATTGATGGTTTCGC 58 NA Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 1 2 2 80 X 19750012 19750132 TACATGGATAAACAGCGTCAC 58 19750172 19750192 ATGGAACAGATGGTAAATGCG 59 NA Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 2 2 2 80 X 19750013 19750132 ACATGGATAAACAGCGTCAC 58 19750173 19750193 CATGGAACAGATGGTAAATGC 57 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 2 4 5 80 X 19905587 19920748 TCTACTTTCTGGTAAATGGAGC 58 19905528 19905548 TAGAGCATATCACATCCATGG 57 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 1 4 5 80 X 19905588 19920751 CTGTCTACTTTCTGGTAAATGGAG 59 19905531 19905550 AGCATATCACATCCATGGCT 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407 3 2 13 122 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20104508 20105411 GTAGCATGAGCTTTACGTGG 59 NA Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 2 2 2 61 X 20118146 20118164 CACTGCAACTACAACTGGG 58 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0077340 2 1 2 73 X 20126836 20126854 GTCCGTTTATCAATCCGCA 58 20126690 20126800 GCTGAGTCCCTTATCAATGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 1 2 4 115 X 20990665 20990689 CTCTAATAATGATATCCTCCAAGCG 59 20990877 20991013 CTTTCAGCTCCAGTTTGGTC 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827 1 1 3 81 X 21004475 21004493 CAGAGATCGATGCAATGCC 59 21004615 21004853 TTGCAGTATTTAGTTGGCCTC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 3 5 8 84 X 21247627 21247645 GCTAATACGCGCCTATCTC 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 3 2 9 98 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499693 21499713 TATAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299526 3 1 5 86 X 21900378 21900396 CAGTAACTCCTGACTGCGA 59 21900444 21902842 GAGAAGAAACCGGTTCTTTGG 59 NA Drosophila melanogaster 61 tRNA:K2:56EF FBgn0011897 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-aca5 FBgn0086672 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-281b FBgn0086607 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32286 FBgn0052286 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31331 FBgn0051331 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073627 1 1 3 90 X 11985518 11985614 TGCAGTTGATACTTCTAGCG 57 11985664 11985685 GCAATTGATTCCTAGACTAAGC 57 NA Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 1 2 2 84 X 21879072 21879090 GTACTGACCATCCTGGTCG 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 Hlc FBgn0001565 FBtr0077221 3 1 1 81 X 21258055 21258073 ACGCCTTATTGAAGCTGAG 57 21257797 21258011 AATCGAACCTTGTAACACCG 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 3 8 8 144 X 21253984 21254063 ACGATTGTAAAGGCTGCTG 58 21254168 21254189 GGTACGTATTAAAGACAATGGC 57 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0299591 1 2 3 80 X 21006584 21006665 TTCGTTCTGTTATATGTGCACC 59 21006703 21006724 CTAATGAAGAATAGAAGGGCGG 58 NA Drosophila melanogaster 61 CG15458 FBgn0040651 FBtr0077328 1 1 1 82 X 20285077 20285095 TCAACGAAGCCTTCAACAG 58 20284951 20284969 GTAGACGAGTCCCAACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42577 FBgn0260867 FBtr0301567 1 1 1 100 X 20130375 20130393 AATTGGAAGCAACGAGGTC 58 20130457 20130475 CGCTGATGTGTTCTTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33491 FBgn0053491 FBtr0089603 2 1 1 62 X 20073536 20073554 CATCAAGCACGAGATGTCC 58 20073406 20073510 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 1 1 1 221 X 19573363 19575882 CATCAACGGAACAGCAGTG 59 19573160 19573178 TTGGTCGGATGATAGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14222 FBgn0031043 FBtr0074763 2 1 1 80 X 19516412 19516431 GGCTACATCATATACCGCAC 58 19516281 19516370 TAAGGCCTTTCTCATGTCGT 59 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 2 2 2 73 X 19506173 19506191 ATCTGTGTCCCGAAACCAG 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14205 FBgn0031034 FBtr0074730 1 1 1 80 X 19487503 19487521 TGCTATCGATACTGTGCGT 59 19487563 19487647 TATTTAGCGGTTGGTCATCCT 59 NA Drosophila melanogaster 61 CG7280 FBgn0030966 FBtr0074655 3 1 1 121 X 18741341 18741423 CCGTAAAGGGTCTTTCATGG 58 18741239 18741257 GAAGATCACGTGCTTGGTC 58 NA Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722 1 1 2 193 X 18739841 18743916 CTTCCACATCGAGCATTGC 59 18744072 18744091 CTCCACGCTAATCTTCTCCT 59 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 3 2 4 232 X 18691376 18691394 CTAAACCAACGTTAGCCGC 59 18690126 18690145 TTCGATGGTCTTGGTCTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15056 FBgn0030918 FBtr0074560 2 1 1 80 X 18309562 18309654 TCTCGTTCAGCGTAATTAGC 58 18309697 18309715 AGCTAATGCGAGACTTCAG 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112878,FBtr0074554 2 4 9 121 X 18269410 18269884 TACAACACCAACAACAGCG 59 18269969 18269987 AGGCACTTGATGTACTCCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 1 1 1 69 X 17744711 17744790 AAAGCACCACAAGTTGGAG 58 17744823 17744841 CTCGGTTTGCTTCATCACC 59 NA DesignNoJunction Drosophila melanogaster 61 RSG7 FBgn0024941 FBtr0074350 3 1 1 91 X 16736028 16736046 CAACTGACGCGGATTATCG 59 16735889 16735973 TAGTAGGCAACCAAAGCCT 58 NA Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 1 2 2 80 X 16721628 16721717 ATGCCACATATCAACTCCCA 59 16721567 16721585 GAACTTGACCACGCTTTCG 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 2 5 5 89 X 16719516 16719535 GGATCTGGATGGTACTTCGA 58 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 CG4768 FBgn0030790 FBtr0074332 1 1 1 80 X 16686703 16686721 CAATCTGGGCACTGTTTGG 59 16686765 16688337 GTGTTCGATGAGCGTTCTC 59 NA Drosophila melanogaster 61 Rrp45 FBgn0030789 FBtr0074355 2 1 1 80 X 16684541 16684719 GGGAATCTGTATGACGCCA 59 16684479 16684499 GTCCTTATACCAGACATCCGG 59 NA Drosophila melanogaster 61 crl FBgn0015374 FBtr0074283 2 1 1 160 X 16488064 16488147 GCGGAATACAAACAGTTAACAC 58 16488350 16488369 TAGTCGGTCGGAAAGATGAG 59 NA Drosophila melanogaster 61 TH1 FBgn0010416 FBtr0074305 3 1 1 159 X 16284107 16284125 AAAGCGACCAATGACTGAG 58 16283898 16283986 CACCACAGGATATTTGATGCA 58 NA Drosophila melanogaster 61 CG9915 FBgn0030738 FBtr0112992 2 1 1 280 X 16205455 16205529 AATCTGATGACGACGGACC 59 16205134 16205154 ATCGATCAGATCATCGTTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 Tcp-1zeta FBgn0027329 FBtr0074086 3 1 1 84 X 15640867 15640885 ATCAATATCAGTGCCGCCA 59 15640930 15641351 CAGAAACCAACATCTTAACGGT 59 NA Drosophila melanogaster 61 CG15599 FBgn0030667 FBtr0074061 3 1 1 178 X 15581209 15581227 CCATCCGAAGCCAATTGAC 59 15580971 15581067 GATTCTTCGGCGTATTGCT 58 NA Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074079 1 1 2 110 X 15341856 15341938 TATGTCTGCTGGTTCCGAC 59 15341764 15341782 CTGCACAATCGAGTACAGC 59 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983,FBtr0073993 1 2 2 95 X 15003795 15003890 GGAGTACAATCCCAAGACG 57 15005123 15005141 TAGGAGAATACGCACAGCA 58 NA Drosophila melanogaster 61 CG32591 FBgn0052591 FBtr0073973 3 1 1 60 X 14821992 14822012 CCATCAAGTCGAACATTACTG 57 14821952 14821971 ACTTGAGATCTCTTCGAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ag5r FBgn0015010 FBtr0073937 3 1 1 110 X 14679995 14680141 TGCGACAATAATGGAGCCT 59 14679903 14679921 GTTGCGATACTCGTTCGTC 59 NA Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 2 2 2 60 X 13280859 13280878 TTGATCAGTACCCGATTCAC 57 13280752 13280770 TGACCACACGCTTAAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42237 FBgn0250862 FBtr0073722 2 1 1 80 X 13015686 13015705 ATCTGACCATAGCCGTAACG 59 13015742 13016149 CCTTATCGTTGTAGATTTCGATCAG 59 NA Drosophila melanogaster 61 CG42237 FBgn0250862 FBtr0073722 1 1 1 80 X 13015748 13016153 GAAATCTACAACGATAAGGAGGG 58 13016190 13016211 GTCGAATTTGATTTCCAATGGG 58 NA Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 2 2 2 80 X 12837476 12837559 TATTTCTGGTCTATCGAAGGGT 58 12837600 12837618 TTCAACTCCTGGATGGCTC 59 NA Drosophila melanogaster 61 CG2540 FBgn0030411 FBtr0073675 3 1 1 60 X 12524739 12524759 CGTTACATTGTCGAGGATGAG 59 12524781 12524799 CGGAAATCTCATGCAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15728 FBgn0030409 FBtr0073674 2 1 1 80 X 12521636 12521718 GGAAAGCCATATCCACCAG 58 12521762 12521780 ATCAGGTTGAGCATTGTGC 58 NA Drosophila melanogaster 61 Tango4 FBgn0030365 FBtr0073622 3 1 1 97 X 11915223 11915241 GTGCACACGCTGATATTCC 59 11915300 11915379 AACTTCTCTAAACGTTCGTCG 58 NA Drosophila melanogaster 61 CG2533 FBgn0030319 FBtr0073537 2 1 1 161 X 11497919 11498120 CGATTACAATTGGATTCAACCG 58 11497779 11497798 TAGAGAACCAGTACGGTCAC 58 NA InUTR Drosophila melanogaster 61 RpII215 FBgn0003277 FBtr0073542 2 1 1 81 X 11461122 11461143 CTGAGTACAACAATCTAAAGGC 57 11460998 11461080 ACACAAGCAATAACCTGGG 58 NA Drosophila melanogaster 61 Gr10a FBgn0045502 FBtr0073549 2 1 1 90 X 11307681 11308542 CCAGGGAGATAGAACACCT 57 11307609 11307627 TACACCAATCGACGATCCA 58 NA Drosophila melanogaster 61 CG1738 FBgn0030291 FBtr0073451 3 1 1 103 X 11243401 11243421 AATTCGATATCAAGAAGGCGC 59 11243483 11243504 CTTGATCAGCTGAAACATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 2 2 2 226 X 10947216 10947384 CAATAGTGTGCTGCGAACC 59 10946793 10946811 TCAGGTTGCAATAAACCGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG16922 FBgn0030254 FBtr0073389 2 1 1 60 X 10850556 10850578 CTTATCCCAGGTGGAAATAAGAC 58 10850597 10850616 GACTGACGGATCCACTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15208 FBgn0030247 FBtr0073383 3 1 1 60 X 10794812 10794832 ATCTAGTCAATGCCAAATCCC 58 10794853 10794872 GCAATAGAGCATGGATTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 X11Lbeta FBgn0052677 FBtr0071493 2 1 1 83 X 10598701 10598800 CTCGATCGGAGTCTTCCAC 59 10598847 10598865 TTGTTGGGCTTTCGATGTG 59 NA Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 2 2 2 86 X 10300656 10300677 CCTACAAGATCAAATATCCGGA 57 10300724 10300803 CGTAGAAGCCGTAAATCCT 57 NA Drosophila melanogaster 61 CG32681 FBgn0052681 FBtr0071466 3 1 1 60 X 10274134 10274155 GATTCATGCTTGGTAACTAAGG 57 10274095 10274113 CGAATGTGGTTGACTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15317 FBgn0030137 FBtr0071371 2 1 1 99 X 9450403 9450422 CTATGCCTTAAGTCTGCGAC 58 9450269 9450341 CTTGATTGGAACCCGTGAC 58 NA Drosophila melanogaster 61 CG17440 FBgn0030120 FBtr0071328 3 1 1 89 X 9162927 9163012 CTATTTCAGATTCTGCCGCA 58 9162857 9162876 GTTGAGCTCTAGATGCTTGC 59 NA Drosophila melanogaster 61 CG12115 FBgn0030097 FBtr0071341 3 1 1 69 X 9084578 9084596 GTGTTGTCATTCGCCTTGG 59 9084116 9084136 AAACATCCTGTTCAACCACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 1 1 1 60 X 9001535 9001555 CTACGTGATTGATTCCAACGA 58 9001574 9001713 CTTGTCAAATATCGCTTTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32706 FBgn0052706 FBtr0071287 2 1 1 60 X 8981561 8981654 AACGCTGTCAAGTTTCAAGAC 59 8981676 8981694 CGAAATGAACTCCACCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Es2 FBgn0023506 FBtr0071198 1 1 1 89 X 8355875 8355893 TACAAATGGCCGAGATTCG 58 8355946 8356106 GGGACATGGCATTATTCCG 58 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 2 2 2 80 X 8318010 8318028 GAAGAACGAAGCCAACAGC 59 8318066 8318151 CTATGAGAGGAACTTAAACGATCTC 59 NA Drosophila melanogaster 61 Corp FBgn0030028 FBtr0071179 1 1 1 86 X 8164893 8165207 TCATCTCCCAAGCCATGAC 59 8164825 8164843 CAAACACGTAGTCCTTGCC 59 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 1 3 3 93 X 8140692 8140710 TCGAGTATGGCATCACCAG 59 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 GIIIspla2 FBgn0030013 FBtr0071159 1 1 1 86 X 8052408 8052604 TAAGAGACCTAGTTGGCCC 58 8052653 8052672 GGTATGTTTGGTTAGCTCCT 57 NA InUTR Drosophila melanogaster 61 Ir7d FBgn0259190 FBtr0299674 2 1 1 80 X 7772527 7772545 GTCCAGAATGCTGAACAGG 58 7772376 7772397 GGATGTCAGCAATACGATAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34338 FBgn0085367 FBtr0112540 2 1 1 80 X 7662366 7662387 TAATTCGTCAGATATTCTGCCG 58 7662428 7662865 AAACAACAGAGCATCTCCG 58 NA Drosophila melanogaster 61 Hira FBgn0022786 FBtr0071070 2 1 1 80 X 7618799 7618885 GCATGGAGTTGAGACATTCG 59 7618927 7618946 CCTCGCATAACTTGATCTGG 58 NA Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 3 2 2 141 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rbcn-3A FBgn0023458 FBtr0070939 1 1 1 80 X 6146591 6146676 ACTTTCTGGATTACAGATGGGT 59 6146532 6146550 CCTCCAGATTCCAGGACAG 59 NA Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 1 2 2 80 X 6132167 6132185 AGATGACTATCAGGCGGTG 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952 3 1 2 123 X 5934812 5935630 CGCTTACGATAAGCTGTACC 58 5935715 5935734 CATCGTGATGAACTTGGGTC 59 NA Drosophila melanogaster 61 CG5966 FBgn0029831 FBtr0070866 2 1 1 92 X 5885411 5885531 CTTTCGAGAGCTTTAAGGACAC 59 5885584 5885602 GGTAATCCTCCTGGCTGTG 59 NA Drosophila melanogaster 61 CG15766 FBgn0029813 FBtr0070832 1 1 1 60 X 5709287 5709307 GACTGTACCAGTGTCTACTCC 59 5709247 5709265 TGTTGATGAGCTGGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 1 2 2 60 X 5567151 5567251 TCCAAGCTCTCCAAGATCC 58 5567275 5567293 GCATCACAATGTAGACGCG 59 NA DesignNoJunction Drosophila melanogaster 61 SPR FBgn0029768 FBtr0070778 2 1 1 90 X 5373107 5373127 ATCACCATTATCTCGAACTCC 57 5373179 5374874 TAGCCATTCCCATTAGCAC 57 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 1 4 4 80 X 4619217 4620278 CGACAGTTTCGGTTACATCTC 59 4620320 4620338 TTGAGCGGATAGCGTATCG 59 NA Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706 2 1 4 83 X 4582279 4582297 TTGTCGAGAAGTCAGGGTG 59 4582343 4585681 TCTCCTTGGTAACGCTAAGC 59 NA InUTR Drosophila melanogaster 61 CG15578 FBgn0040905 FBtr0070659 1 1 1 60 X 4171818 4171842 TAAGTCCATTATAATGGTCCTGGAG 59 4171782 4171800 GTTCAGCTCTGTGTCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15571 FBgn0029696 FBtr0070664 1 1 1 60 X 4110992 4111012 AGCAAATCCCACTACTATGAG 57 4110952 4110972 GCTAAACTTGTAGCAGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 2 1 1 250 X 2627203 2627281 CATTTGCGGCAAACAACTG 59 2627495 2627513 ACTGTAGGGAGGGATTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14052 FBgn0029606 FBtr0070394 1 1 1 114 X 2117976 2117994 GAGGCTCTCAATTGTGGTG 58 2118326 2118344 TTTCTTGTGAATGGGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4406 FBgn0023545 FBtr0070347 3 1 1 80 X 1902434 1902452 TACACCTACTACGCCTTGG 58 1902311 1902390 GCACACTTGCAGAAATTCG 58 NA Drosophila melanogaster 61 CG14803 FBgn0023513 FBtr0070310 1 1 1 86 X 1763268 1763341 GAGGCCTGTAAGAATGTGC 58 1763391 1763409 ACCAGAGTTCATAGAGGCG 58 NA Drosophila melanogaster 61 CG14811 FBgn0029590 FBtr0070373 3 1 1 60 X 1715816 1715834 TCTCCCAAGCTTGTAACCC 59 1715774 1715794 GTGATAGAAATACGACGAGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14810 FBgn0029589 FBtr0070374 1 1 1 81 X 1714144 1714226 CATCCATTTCGAAGAACAAGAG 57 1714084 1714102 TTCATCCCATTGGACTTGG 57 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 1 3 3 80 X 1674794 1674813 AATAGTCTCCAGGCGTTGTC 59 1674856 1675766 GACTGATATGCTGTGGCCT 59 NA Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 3 2 2 97 X 1347991 1348058 TCTATACGATCGTGGGAGC 58 1348118 1348137 CTACTGTCCGTTGGAATCAC 58 NA Drosophila melanogaster 61 CG14626 FBgn0040360 FBtr0070200 2 1 1 147 X 1081152 1081894 CTCTATGTTGGTCCCACAG 57 1082002 1082023 TACTGGTTACATATGGAATGGG 57 NA Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 2 1 1 131 X 822359 822433 AGAAATACTCAAGCTGGCG 57 822592 822610 AGCTTCATCAGAGACTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 cin FBgn0000316 FBtr0070064,FBtr0070065 1 2 2 80 X 150606 150624 TATGCCATGAAGTCCACTG 57 150665 150806 CAAAGAATTAGGTGAATCTCCG 57 NA Nonspecific Drosophila melanogaster 61 CR40613 FBgn0085756 FBtr0114206 1 1 1 60 U 9557283 9557303 CAAGAGTATCCAAACACCTCG 58 9557243 9557267 TATGATAGGGACACTATCATATGCG 60 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32009 FBgn0052009 FBtr0089180 1 1 1 111 4 48503 49545 GCTGTTTGCTAAGGATATTCCA 58 48413 48431 CTGTTGCATCGCTGTACTC 59 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111046,FBtr0111044,FBtr0111045 2 3 3 60 4 996098 996118 AGCCGAGAGTACTATTAATGC 57 996136 996158 CCACTACAGGAATCTTAAAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 3 6 6 101 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974432 974452 ACTGAAGTAGGAGTAAATGCC 57 NA Drosophila melanogaster 61 CG33797 FBgn0053797 FBtr0091801 2 1 1 65 4 864300 864318 AGAGATCCATTGTGCAGGG 59 864347 864365 TCCACAGCCACTTAATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lgs FBgn0039907 FBtr0089111 1 1 1 80 4 463536 463559 CTTACTCAGATGGTAGATTGTGAC 58 463005 463500 AGAACTTATTTCAGCTTCCTCG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-291 FBgn0065064 FBtr0091755 2 1 1 60 3R 7049446 7049464 ATATTCCAGTAACGGTGCG 57 7049487 7049506 ACGTGATATGGTTTAACCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 3 1 1 65 3R 26038648 26038668 GTTTGCTTTCATCATCCTGAC 57 26038694 26038752 TTTATATCCGTCAGCCAACC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-3 FBgn0084245 FBtr0113490 2 1 1 139 3R 12589320 12589338 CTCAAAGGGAAAGCCAACG 59 12589199 12589219 AGAAGCGATGAATTTCGAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42233 FBgn0250755 FBtr0290135 1 1 1 80 3R 27630081 27630252 GCATGACCTAGAAACAGGGA 59 27630020 27630042 CTGATCCTGTCTACACTTAAACC 58 NA Drosophila melanogaster 61 CG1890 FBgn0039869 FBtr0085836 2 1 1 87 3R 27569552 27569627 AAGAGAAGACTGCAGAAGGAG 59 27569672 27569694 CCTTCTTATACGAATCTGTCTCG 58 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 1 3 3 80 3R 27400375 27400394 AGCTACCCTACAACGATCTG 59 27400435 27400531 CAAAGGTGGCTATGGAATTGG 59 NA Drosophila melanogaster 61 CG31005 FBgn0051005 FBtr0085769 1 1 1 80 3R 27066765 27066785 TACATCTTATCGATTGCCTCG 57 27064198 27066723 GGTCAAGATCTGACTCAGC 57 NA Drosophila melanogaster 61 CG11318 FBgn0039818 FBtr0085739 1 1 1 80 3R 26933506 26933594 CAGGACTGAGAAGCAATTATCTC 59 26933448 26933466 CCTTTGAATCCGGATTGCG 59 NA Drosophila melanogaster 61 CG11317 FBgn0039816 FBtr0085741 3 1 1 95 3R 26917841 26917859 CACGTCAACATCGAAGGAG 58 26917483 26917783 GTGAGTGATTCGTCGTAGTC 58 NA Drosophila melanogaster 61 spdo FBgn0260440 FBtr0085651 1 1 1 95 3R 26303815 26303833 CATTACCTTGGCCGTTGTC 59 26303892 26303989 AAGGACTTTCCGAGGTGTG 59 NA Drosophila melanogaster 61 CG15536 FBgn0039766 FBtr0085628 1 1 1 60 3R 26250353 26250372 GACTCTCAAGAAGCGATCTC 57 26250312 26250330 AGATAGCGTAGCATCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34317 FBgn0085346 FBtr0112516 2 1 1 60 3R 25882876 25882894 CAGACTCCGTGACTCTGAC 59 25882918 25882936 CTAGCCAAGGAGCTATGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34298 FBgn0085327 FBtr0112494 1 1 1 80 3R 25825858 25825937 TCCAATGTGAGCAACATGC 59 25825980 25825999 AGGAGCCAGTTTGTTATCCA 59 NA Nonspecific Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085547,FBtr0085549 2 3 3 60 3R 25824839 25824860 CACACGAATCATTAAGATCCAG 57 25824880 25824899 AAAGTAGCTATCCTCCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 CG7568 FBgn0039673 FBtr0113306 2 1 1 81 3R 25426481 25426558 CTACTATCCGCCAGGACTG 59 25426418 25426440 TAGGTCAAGTAGATCGAAGTGAC 59 NA Drosophila melanogaster 61 CG1443 FBgn0039620 FBtr0085345 1 1 1 94 3R 24820389 24820407 CACCTTCACCAAAGTCCTG 58 24819958 24820331 AAGTGGTGATCACAATGCC 58 NA Drosophila melanogaster 61 CG10000 FBgn0039596 FBtr0085315 2 1 1 80 3R 24576874 24576956 GGCATCATAGTTGTACTACACG 59 24576815 24576835 TGTGGAAACTAATCACCACAC 58 NA Drosophila melanogaster 61 AR-2 FBgn0039595 FBtr0085316 2 1 1 103 3R 24563358 24566201 TCTACAAGGCCGTTAACTG 57 24563273 24563291 TTAGAGTCCAGTGGTGGAG 58 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 2 1 1 60 3R 24108437 24108455 ATGGCACTGGTCTTATTGC 58 24108476 24108557 CAAAGTATTTGTGAATCAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Gp93 FBgn0039562 FBtr0085254 2 1 1 84 3R 23776244 23776263 GCAAGGTTCTCGATATGCTG 59 23776309 23776661 CCCAATTTGATGTTGGTGGA 58 NA Drosophila melanogaster 61 CG34294 FBgn0085323 FBtr0112490 1 1 1 69 3R 23465821 23465839 ATATTGAGCCTGTCGAGGA 57 23465770 23465788 TCTGAGTGCTTCGATTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 2 3 3 82 3R 23081102 23081183 CATTATGCCTGTTAACATCACG 58 23081226 23081244 CAGGCACTTGTATGGTGAG 58 NA Drosophila melanogaster 61 TwdlQ FBgn0039448 FBtr0085049 2 1 1 230 3R 22519067 22519242 CGAGGATTTCTGTTACTCTTACTC 58 22518860 22518878 CTCCTTGCTGAACTCATCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG34130 FBgn0083966 FBtr0110871 1 1 1 60 3R 22015251 22015269 TGTCGCTGTCATAGAACTG 57 22015209 22015230 GAGGGTAACATAGTTATTCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139,FBtr0290138,FBtr0290141,FBtr0290140,FBtr0290137 2 5 5 188 3R 21733742 21733760 ATCGGCTTCTATTTCGGCT 59 21733912 21735764 GATTCCAGACACGAAGCTG 58 NA Drosophila melanogaster 61 Tsp96F FBgn0027865 FBtr0084912 3 1 1 124 3R 21701835 21702262 CTGGTTTCGTTCTTCTGTGTC 59 21701731 21701749 TGGACTGACGACTTGACAG 59 NA Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177,FBtr0084922 2 2 2 60 3R 21601326 21601345 GGTACGTGTGCTTGATTCTC 59 21601285 21601303 AATCTCAACATGAGGGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 3 2 2 84 3R 21505848 21505867 AGTTCCTTAGTTCGGTCACC 59 21505720 21505801 AAGCATGCCAACACTTCTG 59 NA Drosophila melanogaster 61 CG4582 FBgn0039344 FBtr0084896 2 1 1 80 3R 21407985 21408204 CTTCAATCCCACCAGAATCCT 59 21407925 21407943 TAAGCTGGCAATAGCTCGT 59 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 1 2 2 132 3R 21425812 21425831 CCCTCATATCACAGAACCCA 58 21425926 21426003 TAGGGTGCATATCTGACGC 59 NA Drosophila melanogaster 61 CG5116 FBgn0039339 FBtr0084877 1 1 1 93 3R 21309511 21309583 GGATGATCGAGCCTACGAC 59 21309640 21309658 ATACGGTTGGAGGATGAGC 59 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 3 3 3 93 3R 21133345 21133424 TATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG31104 FBgn0051104 FBtr0084825 3 1 1 193 3R 21111620 21111638 TACCAAACTGTTTGTGCCC 58 21111792 21111868 AGTATGGTTGCTCATTGATGAC 58 NA Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 2 1 1 68 3R 21104413 21104495 GCTTTGCATTCTACGGTAGTG 59 21104365 21104383 ATTGAAACAGGCATCCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0084762 3 1 3 112 3R 20875573 20875591 CGATCGTGTTGTTAGGCAG 59 20875665 20876919 CACGTTGACAACATTTACCCA 59 NA InUTR Drosophila melanogaster 61 CG11771 FBgn0039252 FBtr0084748 2 1 1 96 3R 20757947 20758023 TTACATAGTGCTGGTACCGG 59 20758081 20758100 GATGGTGATGTCACTGAAGG 58 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 2 1 1 151 3R 20630070 20630088 ATGTCTGTTCAACGAGCCT 59 20629879 20629955 TTAGTGCAGCAATTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089915 1 1 2 175 3R 20483111 20483132 ATGATATGGAATTGGACACTGC 59 20484125 20484230 TCGGCTTTATATTGCCGGT 59 NA InUTR Drosophila melanogaster 61 CG6129 FBgn0039152 FBtr0084544 2 1 1 83 3R 19948739 19948815 GTTGAATTTGAGGTCTGAGGA 58 19948860 19948878 CTCACTCGGTTAAGCTCCT 58 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084538 1 1 3 300 3R 19877451 19877469 AAACGTCCAGAACTCCTCC 59 19877815 19877833 ACCACCTGTCTGAGATTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5933 FBgn0039139 FBtr0084532 3 1 1 93 3R 19858402 19858490 CCAAGAGAAAGTTGGAAGTCG 59 19858545 19858563 AGGCTTGTGGACTCTTTCC 59 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 2 2 2 108 3R 19760639 19760754 GATAAGCGCTATTTGATGCC 57 19760825 19760843 CGTGCACAGTATTCAAACG 57 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425,FBtr0301859 3 3 3 109 3R 19341011 19341030 GCTTTATCCTGTCTTGGCTC 58 19340868 19340939 CCAACCAGATTCCTCTTGG 57 NA Drosophila melanogaster 61 CG31139 FBgn0051139 FBtr0084321 1 1 1 83 3R 18574657 18574676 TAATCCTCTCCTGCACTTGC 59 18574538 18574614 CGTAGCTGGTATTTGAGTTTGG 59 NA Drosophila melanogaster 61 CG13843 FBgn0038993 FBtr0084269 3 1 1 81 3R 18435811 18435880 TATCGTCAATCAGTCAAACACC 58 18435922 18435940 TACGCGTTGATCTAGCTCC 59 NA Drosophila melanogaster 61 CG17819 FBgn0038915 FBtr0084152 1 1 1 80 3R 17710675 17710694 CCTATATCGCCTAACTGGTC 57 17710557 17710633 TTTACGATCTCCTGAACACC 57 NA Drosophila melanogaster 61 RpS20 FBgn0019936 FBtr0083964 2 1 1 111 3R 16648604 16648863 TCGCTTCCAGATGAGAATCC 59 16648937 16648955 GGTGACCTCAACCTCTACG 59 NA Drosophila melanogaster 61 KaiRIA FBgn0028422 FBtr0083938 3 1 1 81 3R 16476982 16477000 GATCAGGAAGAAGTGCGAG 58 16476859 16476940 ATGTAGAACCACTATTTACGGG 57 NA Drosophila melanogaster 61 CG4362 FBgn0038784 FBtr0083900 1 1 1 81 3R 16132291 16132309 TCTTACCTGCTCTCACTGC 59 16132161 16132179 TCCGTTTCCGGAATTATCG 57 NA DesignNoJunction Drosophila melanogaster 61 Rh3 FBgn0003249 FBtr0083876 2 1 1 60 3R 15907943 15907963 CACGCTCTACATCTTCTTCAC 58 15907903 15907921 GACCCAAATCACCAGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arc42 FBgn0038742 FBtr0083817 1 1 1 65 3R 15703604 15703622 AATCAGTACTCACCCGCTC 59 15703738 15703756 ATGAGGCAATTTGACGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11447 FBgn0038737 FBtr0083815 2 1 1 61 3R 15687506 15687524 GATCCGTACGTGGAGAAGG 59 15687548 15687567 AGTAATTTGAAGGCACTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301378,FBtr0083787,FBtr0301380,FBtr0301379,FBtr0100127 2 7 7 107 3R 15578394 15579483 GCTTCACTAGCAAATAATGCCA 59 15579551 15579569 TCCAGATGGTCGTATTCGG 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 3 3 3 173 3R 15229536 15229625 ATCTTTCACTTGAACCGGAG 57 15229760 15229779 TGTTGATACGAAGTCCTTGG 57 NA Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 3 1 1 186 3R 14179361 14179436 AAAGGATCAGCCTTGAAGG 57 14179193 14179212 ATCTTAACCACCTCGATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 1 5 5 80 3R 14131624 14132351 GCAGCTCACTGAATATCCC 58 14131562 14131580 GAATACGGAGCACCATCAG 58 NA Drosophila melanogaster 61 CG7993 FBgn0038585 FBtr0083562 1 1 1 80 3R 14049772 14049791 CTGGTTAAAGTGCTGAACCG 59 14049831 14049920 GTTCTTCATGGTCAAGAACTCC 59 NA Drosophila melanogaster 61 CG31251 FBgn0051251 FBtr0083484 2 1 1 114 3R 13509956 13509974 CCCAGAGACGATCATCCTC 59 13509801 13509879 GAGCTCCTTTGCTTTATCGT 58 NA Drosophila melanogaster 61 Prx5037 FBgn0038519 FBtr0083503 2 1 1 80 3R 13371562 13371639 CTAGATTTCACATTCGTTTGCC 58 13371503 13371522 CTCGGTGTTAATGTCATGGA 57 NA Drosophila melanogaster 61 CG5823 FBgn0038515 FBtr0083505 3 1 1 133 3R 13358914 13358992 TGAGCTTCATGCTGGAGAG 59 13358799 13358818 TATCTCCGGAAACAGCTCAC 59 NA Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 3 2 2 142 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264943 13265025 GTGTCCAACACAATTATGTCG 58 NA Drosophila melanogaster 61 CG17556 FBgn0038462 FBtr0083375 3 1 1 164 3R 12821780 12821798 CTAACGGCTCATTACGCTG 58 12821522 12821652 CTGATCCCGTACATCCGAC 59 NA InUTR Drosophila melanogaster 61 decay FBgn0028381 FBtr0083304 1 1 1 81 3R 12325532 12325550 TTCAGCCCATCACCTATGC 59 12325164 12325490 CGGAATGAGAAGAATTTGTCGA 59 NA Drosophila melanogaster 61 CG5478 FBgn0038386 FBtr0083242 1 1 1 60 3R 11758813 11758834 GCACCAAGATAAAGATCACTCC 59 11758774 11758794 TCGATGGTAGCCTTTATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12784 FBgn0038356 FBtr0083169 2 1 1 60 3R 11588991 11589010 TGATAGTGATCAGCTTTGCC 58 11589032 11589051 GGTATGGCCAGAGATACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31294 FBgn0051294 FBtr0083198 2 1 1 67 3R 11542155 11542176 CTAATGGATGTTATGAAGCAGC 57 11542052 11542127 CCTTTAGTGCCAGTGTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG5205 FBgn0038344 FBtr0083147 3 1 1 109 3R 11315135 11315153 ACTCAAGGTACGCGATGAC 59 11315226 11315302 GAATGTTCACCTTGCCGTG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963 2 1 13 62 3R 11112233 11112251 GATCTCAGCAGGTAAAGCG 58 11112276 11113054 TTAGTTTCGCTTGTGGATCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RpL10Aa FBgn0038281 FBtr0083024 3 1 1 60 3R 10863673 10863693 GAACTAGCTCGAAACATAGCA 58 10863714 10863733 AGTTATCCTTCAGCAAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8461 FBgn0038235 FBtr0082986 2 1 1 118 3R 10339131 10339211 AAACTCAGAATGCCATTCGC 59 10339032 10339050 AGAACTCTTGCTACCGAGC 59 NA Drosophila melanogaster 61 CG3199 FBgn0038210 FBtr0082894 1 1 1 60 3R 9989067 9989087 CATCAAATGTGGCGATTATGC 58 9989165 9989184 AAGGTTCCTGTCCAAATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31517 FBgn0047199 FBtr0082864 3 1 1 144 3R 9774642 9774660 CCATCAGAAATCGCTGGAC 58 9774852 9774870 GCATCTTTGGTCATCTCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31495 FBgn0051495 FBtr0082882 3 1 1 60 3R 9664984 9665002 ATACGGGAAGTCTTGGAGG 58 9664942 9664960 AGTCGTCAATGATGACGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 2 3 3 83 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610094 9610113 TGGATCATCGATCTGGACAC 59 NA Drosophila melanogaster 61 CG9312 FBgn0038179 FBtr0082825 3 1 1 80 3R 9591684 9591702 GATAAGCACCCAGAGTCTG 57 9591830 9591848 AAATCGTCACTGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082857,FBtr0082856,FBtr0082855 1 4 4 94 3R 9468613 9468631 CACGGCAAGATCTTTGTCG 59 9468464 9468555 TCCACCTCGACGATATTGC 59 NA Drosophila melanogaster 61 CG10841 FBgn0038163 FBtr0082795 2 1 1 87 3R 9459165 9459253 CTGATGAGATCGATACAGTATTCAC 59 9459298 9459316 TCCTGGATGTGACGAAGTG 59 NA Drosophila melanogaster 61 CG14370 FBgn0038158 FBtr0082788 2 1 1 60 3R 9413936 9413955 GTGTTCTACCGACTGATGCT 59 9413978 9413996 AAACGTACACCGCATACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 poly FBgn0086371 FBtr0082772 2 1 1 145 3R 9192597 9192616 TTACGGTCATACTAGCACCT 58 9188569 9192489 ATTGTTTCGATCCGTTGGT 57 NA InUTR Drosophila melanogaster 61 CG8784 FBgn0038140 FBtr0082745 3 1 1 81 3R 9168243 9169317 AGAATGTTGGTAGCTGTAGC 57 9169361 9169379 GTCCGTAAACTGCCATCAG 58 NA Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 2 2 2 97 3R 9058559 9058695 TTGCTAAGACGGGAAATCC 57 9058480 9058498 GATCTTATCGTCGGTGCTG 58 NA Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 1 1 1 60 3R 8467005 8467280 CTATGCCTCATCGGATGTG 57 8466963 8466981 AAGGAGGTAGGCTAAGGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Pp1-87B FBgn0004103 FBtr0082595 2 1 1 91 3R 8250235 8250347 AATGATGCATGAAACCCGG 58 8250162 8250180 GATGTCCTTTGATCGTGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4810 FBgn0037994 FBtr0082546 1 1 1 81 3R 8019732 8019750 GGTTCCATCAATTCGGCAC 59 8019592 8019687 CAATGCGAAGAACCTGCTG 59 NA Drosophila melanogaster 61 Hsp70Ab FBgn0013276 FBtr0082482 1 1 1 60 3R 7786002 7786021 AACATCACGATCAAGAACGA 57 7786044 7786062 TCACCATGCGATCAATCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 2 4 4 80 3R 7614294 7614374 ACTCAACAGGTAACTTCACC 57 7614416 7614435 TGTAGGTGTGGAACAAATGG 58 NA Drosophila melanogaster 61 CG6790 FBgn0037915 FBtr0082460 3 1 1 94 3R 7403616 7403698 TCTTACTTATTTCGGCTCCCA 59 7403542 7403560 TTTCGGTCACGTGTTTCAC 59 NA Drosophila melanogaster 61 CG10898 FBgn0037911 FBtr0082410 2 1 1 129 3R 7384371 7384389 TTCTGATGATCGAGGAGGC 59 7384552 7384572 GCATTTAGACCAGTCTCTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17721 FBgn0037885 FBtr0082354 2 1 1 81 3R 7061192 7061210 TCAATTGGCATAACGACCG 58 7061348 7061367 TCACTCAGTTCATACTGGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14701 FBgn0037883 FBtr0082353 3 1 1 80 3R 7057835 7057922 CAGATCTCCAAGGAGGAGC 59 7057961 7057984 GTATATGACCTTGATGACTAGGGA 59 NA Drosophila melanogaster 61 CG12420 FBgn0037797 FBtr0082222 1 1 1 80 3R 6048713 6048731 TGGTCATGTGGTCATCCAG 59 6048769 6048857 GTCAGATTCAGACTTAGAACTTGAC 59 NA Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583 2 1 2 106 3R 5594550 5594653 CGTACTATGAAGGGCTTCCT 59 5594722 5594740 GTTGATTAGGGCGCAAGTG 59 NA Drosophila melanogaster 61 CG9427 FBgn0037721 FBtr0082104 2 1 1 104 3R 5451467 5451486 CAGAGTTGCGTCATCAACAG 59 5451278 5451401 ATTGGCACACTGATCAATGC 59 NA Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105 3 1 2 137 3R 5415710 5415728 CTACGATCAGCCGAATGAC 58 5415491 5415609 CAGCATCACTGACACAGAG 58 NA InUTR Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082068 2 1 2 81 3R 5385742 5386651 TTTCTACTACAGCCGAGCC 59 5386696 5386714 CGGTTGCTTGAAGATCGAG 59 NA Drosophila melanogaster 61 by FBgn0000244 FBtr0082119 3 1 3 283 3R 5356696 5356715 CGAGTCTGACAAGAAGACCA 59 5354651 5354670 ATAATTCCGCATGATTCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8135 FBgn0037689 FBtr0082030 1 1 1 87 3R 5232775 5232853 ATTCCCAACCGCATTATGG 58 5232903 5232922 AGATATTGAAGCCGTTCGAG 57 NA Nonspecific Drosophila melanogaster 61 CG18473 FBgn0037683 FBtr0082025 2 1 1 85 3R 5190249 5190325 ATCGATTGACCTCCTATGGC 59 5190373 5190391 CAAAGTTACTCCGCGATCG 59 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996,FBtr0081997 3 2 2 136 3R 4868681 4868699 GAAAGCCGGGTTTGATCAC 59 4868496 4868583 CTGGCGAACTTCTTCAAAGTC 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0301425,FBtr0089784,FBtr0089782,FBtr0112823,FBtr0089781,FBtr0114459,FBtr0112822 1 8 8 95 3R 4666328 4668401 ATCGATTGCAAGTCAACGA 57 4666251 4666269 CACTATCGCGTAACACCTG 58 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922,FBtr0081921 1 2 2 80 3R 4652248 4652270 ATGATGAGCTCTACTACGAACTG 59 4652308 4652382 TCGTTGTATAGCGAAGAACCA 59 NA Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 3 2 2 125 3R 4576581 4576599 CATCATTCTGGGTAGTGCC 58 4576408 4576426 ATCATGAGCGTGAAGAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8145 FBgn0037617 FBtr0081911 3 1 1 80 3R 4550091 4550182 GTAAGGAAGTATAGTTGCGATGTC 59 4550220 4550239 GGTATTGGAGATGAAGTGCG 58 NA Drosophila melanogaster 61 hb FBgn0001180 FBtr0081950 1 1 2 76 3R 4523066 4523084 AATTCTCCCGCAGAATTGC 58 4519855 4519873 CTGTCGTCTCCCAGTTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31454 FBgn0051454 FBtr0081870 1 1 1 117 3R 4347889 4347980 ATGGTCTACATGTTGGCAC 57 4348061 4348079 AGAGGCTTCCATTTAGCGA 58 NA Drosophila melanogaster 61 Gfr FBgn0037567 FBtr0081863 2 1 1 84 3R 4128723 4128795 GAAATCAAGGTCACATCCGC 59 4128658 4128676 AGTACTGAGTGGCGATCAC 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 2 4 4 85 3R 3843986 3844004 AACTGGAGCTACAGGTCAC 59 3842717 3843939 CATCTGAATATGGTTCTGCGG 59 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 1 2 2 116 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625606 3625624 CAGGAAACTTGGGCAAGTG 59 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0112841 1 1 2 176 3R 3190260 3190341 GCTTCTAAAGACCACTTCTCG 58 3190104 3190122 AACAACTGCCAAATGGTCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 2 3 4 182 3R 3100072 3100726 GAGGATATTGCCTCGACCC 59 3099908 3099926 GTTCTTGTTCGGGAAGCTG 59 NA Drosophila melanogaster 61 CG10053 FBgn0037490 FBtr0081576 2 1 1 167 3R 3073005 3073092 AAATTCCTGGTTGGTCTGC 58 3073223 3073241 GTTGAGGGACTGTTGAAGG 58 NA Drosophila melanogaster 61 CG14607 FBgn0037488 FBtr0081575 2 1 1 100 3R 3068388 3068457 CAAGTCCAGGCTCAAAGTG 58 3068521 3068539 GTTGGATATGGTGCAGGTG 58 NA Drosophila melanogaster 61 CG10055 FBgn0037482 FBtr0081605 1 1 1 88 3R 3011921 3012035 CTGTACAAATTCCACAGCCG 59 3011852 3011872 TGGTAGTGATTCTCTGTCGTG 59 NA Drosophila melanogaster 61 CG1965 FBgn0037466 FBtr0081634 1 1 1 80 3R 2896231 2896252 AATCGATCCGGATATCAATCTG 58 2896293 2896369 CATTCTGTGACCAGAGCAG 58 NA Drosophila melanogaster 61 Pif2 FBgn0046873 FBtr0081676 1 1 1 80 3R 2374797 2374817 GGTAAATAGTCACACGGACAC 58 2374859 2374938 TTCGATTCGTGCTTGAACC 58 NA InUTR Drosophila melanogaster 61 cas FBgn0004878 FBtr0078725 3 1 1 185 3R 1540406 1540424 ATGCATGCCAATTTCCACC 59 1540169 1540258 TTTGTGCTTGTCCATATCGG 58 NA Drosophila melanogaster 61 CG14673 FBgn0037352 FBtr0078738 3 1 1 94 3R 1452575 1453048 TGAAATTGAGCTACACCTGTG 58 1452501 1452519 GGTCTCTACGGACTCATCG 59 NA Drosophila melanogaster 61 CG12147 FBgn0037325 FBtr0078793 2 1 1 60 3R 1251960 1251980 TCATGTATCTGAAGTACTGCC 57 1251920 1251938 AGATACACGTAATCCGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim17a2 FBgn0037307 FBtr0078820 2 1 1 60 3R 1084818 1084836 GGATTGTAGAGGATTGCGG 58 1084776 1084794 TGAAACAACGATCCTCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1113 FBgn0037304 FBtr0078779 2 1 1 81 3R 1080571 1080589 TATCATGATCCTCGTCCGC 59 1080634 1080706 TGTGGGATTCGTTCAAGGA 59 NA Drosophila melanogaster 61 Prosbeta2R2 FBgn0037296 FBtr0078831 1 1 1 80 3R 1045114 1045132 GAAATACCCAGACCGATCG 57 1044658 1045071 TTTAGTTGTTTGTTGCGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG14657 FBgn0037282 FBtr0078875 3 1 1 67 3R 645548 645567 AAGATGATGAGGACAACGAC 57 645444 645518 TGGCAATGTCAAGTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 1 3 3 95 3R 525963 525981 AACGACCTGAGTGATTTGG 57 526040 526888 ATGGTCGCTCATAACACTG 57 NA Drosophila melanogaster 61 CG14650 FBgn0037252 FBtr0078926 2 1 1 88 3R 266038 266127 CCAAAGATGGTGACATTTGGG 59 266175 266195 TATGTCATAGACCTTGCCGTC 59 NA Drosophila melanogaster 61 vps24 FBgn0037231 FBtr0078958 3 1 1 134 3R 136072 136146 AAATCAGCTATCCACCTTGC 58 135957 135977 GCCTTCATCATTTCCTTTGAC 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3308 FBgn0082973 FBtr0113601 3 1 1 60 3L 832612 832631 AATCCCTATTGAGGCAACAG 57 832571 832589 CTTAGACGCGTTCAAAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32385 FBgn0047205 FBtr0076899 1 1 1 82 3L 6970042 6970060 TATAAGGTCGCTCGCTTGG 59 6970101 6970286 GAGTAAGAACTCGGATATCAACAC 59 NA Drosophila melanogaster 61 CG40470 FBgn0058470 FBtr0111152 3 1 1 80 3L 23927921 23927996 TTAAATATGGGAGATGGGACGT 59 23927862 23927882 AACAAATACAGGCTTTCGAGG 59 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 1 3 3 84 3L 23741153 23741252 CTGGACAGAACGAATATTGTG 57 23741295 23741316 GGCACATTTCCGAATATTAAGG 57 NA Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0089836,FBtr0299877 1 2 2 65 3L 22858910 22858982 TCACAGAACTATGAGGTCCC 58 22859010 22859028 TTTCTCGTTGAAACGCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 DNApol-eta FBgn0037141 FBtr0078489 1 1 1 80 3L 21933938 21933957 ATAAAGTTCATGGGCCAGGT 59 21933819 21933897 TAGCCAGGTTCCATTCTTCTC 59 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 3 2 2 121 3L 21675715 21675790 TACAAGAAGCTCGTTCAGCA 59 21675874 21675892 ATACCCTCGCCTAATTGGC 59 NA Drosophila melanogaster 61 CG32445 FBgn0052445 FBtr0078425 3 1 1 65 3L 21633116 21633134 AACATCTCGAACCACAGCT 59 21633163 21633181 CTGATAGAGCGTATCCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7166 FBgn0037107 FBtr0301161 2 1 1 80 3L 21615740 21615837 TGTAAACTCAGAAATGCTGTGG 59 21615681 21615704 TCATCTCGTGGATACATAGATCTC 59 NA Drosophila melanogaster 61 CG32436 FBgn0052436 FBtr0078343 3 1 1 80 3L 21343495 21343514 ACTGCTGAGATTGTGTTTGG 58 21343554 21343661 CCGATAATAGTACTGCAAACGG 59 NA Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 2 1 1 67 3L 21209786 21209804 CAACTTCTTGACCTCCGTG 58 21209672 21209757 TGTTAATCGTCAGTTTCAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11396 FBgn0037022 FBtr0078276 3 1 1 97 3L 20780957 20780977 GACGACGTAAGAAATCTGTGG 59 20780803 20780898 ATGGGATCTGCCAAGTCAG 59 NA Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113182,FBtr0113183 3 2 2 182 3L 20710402 20712120 GGTGTAACGAGTCAACATGC 59 20710239 20710257 CGCCCATTTATCGAAAGGC 59 NA InUTR Drosophila melanogaster 61 knrl FBgn0001323 FBtr0078212 2 1 1 131 3L 20595358 20610495 CATATGCGATGAATCAGACGT 58 20593035 20593053 AGTCGGATATCGACGACAG 58 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 3 2 2 135 3L 20432553 20432638 AAGGAACCAAACCTGAAGC 58 20432436 20432456 GTCTCTAATCCCTGATAGCCA 58 NA Drosophila melanogaster 61 Snap FBgn0250791 FBtr0074840 1 1 1 102 3L 20308395 20308507 CTCATCAAGGTGTTGTGCG 59 20308573 20308591 TGTACCACTGATCCAACCG 59 NA Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 2 2 2 95 3L 20305625 20305644 GATCAAATCTCGCGTATGCC 59 20305700 20305787 GAAGTTTAGCTGCACAGAACC 59 NA Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 1 2 2 80 3L 20021261 20021282 TCCTTAAAGATGTACCAAGCCA 59 20021147 20021222 TGAAGAGCTTCATTTGAGCAG 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 2 6 6 91 3L 19853428 19853510 AGACAGCATGGAGATCCTG 58 19853565 19853583 ACTCATCCTTCCTCTTGGG 58 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 1 3 3 80 3L 19719797 19719815 TCACTGGCGATCTCAAGAC 59 19719595 19719756 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG14085 FBgn0036859 FBtr0074992 3 1 1 80 3L 19266242 19266321 TGAGCAGGCTAAAGATCTGG 59 19266363 19266382 TTGTCATCCTCGTCAATGGA 59 NA Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 2 1 1 79 3L 19121728 19121815 AATGACTATAGATGTGGGCGA 58 19121669 19121687 TGTCCTTGACTACGAACAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32027 FBgn0052027 FBtr0075059 3 1 1 81 3L 18835357 18835455 AAGGAATATGAGGAGACGGT 58 18835496 18835517 GAAATATGTAACAGGTTGCCAG 57 NA InUTR Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 1 2 2 80 3L 18796088 18796171 CTTAACAAGCTCTGTCCGA 57 18796026 18796046 ATCATCTATCTTGAACTCCCG 57 NA Drosophila melanogaster 61 CG5290 FBgn0036772 FBtr0075152 2 1 1 81 3L 17905290 17905360 GTGACAGTTGAAGATCTGCC 59 17905228 17905249 GGAGTTCATCTATTGTCCACAG 58 NA Drosophila melanogaster 61 CG18265 FBgn0036725 FBtr0075219 1 1 1 107 3L 17433002 17442503 GCCGGAGACATTTAATATCATCC 59 17442570 17442588 TCGATGAGTTGGAGACGTC 59 NA InUTR Drosophila melanogaster 61 CG7730 FBgn0036689 FBtr0089584 3 1 1 81 3L 17021742 17021761 ATAAATGGTGCCTCAATGGT 57 17021805 17021881 GGTCATCTCCATGTTTCGA 57 NA Drosophila melanogaster 61 Cpr73D FBgn0036680 FBtr0113176 2 1 1 90 3L 16933672 16933745 AGGATAAGAGGTCTGTACTCCT 59 16933603 16933621 AGATCTCGAATCCGGTTCC 59 NA Drosophila melanogaster 61 TSG101 FBgn0036666 FBtr0075329 1 1 1 80 3L 16836408 16836426 TACCTTCGGAGATCATCCG 58 16836469 16836619 GGCATATAAGAGTTCGTGGG 58 NA Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 1 2 2 82 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774820 16774838 TCATACTTGGGCGGAATGG 59 NA Drosophila melanogaster 61 CG13032 FBgn0036652 FBtr0075316 2 1 1 88 3L 16668567 16668587 GGATATGATCAAGAAGCTGGA 57 16668634 16668711 CAAATTCCTCCTTTCGAAACTC 58 NA Drosophila melanogaster 61 CG13038 FBgn0040795 FBtr0075429 1 1 1 80 3L 16320860 16320881 TTCTCAGTGATTTACCCTCTCC 59 16320674 16320819 CTAAGGCCAGAAGCAACAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4962 FBgn0036597 FBtr0075471 3 1 1 80 3L 16288501 16288582 TGTTCAAACTGATTGCCCT 57 16288439 16288457 CATATCCATGGCTGTAGGG 57 NA Nonspecific Drosophila melanogaster 61 CG33688 FBgn0053688 FBtr0091668 2 1 1 96 3L 16192717 16192736 TTAAAGGATCCACGACAGTC 57 16192794 16192874 TGACAACGTCCTTATATGGG 57 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 2 2 2 82 3L 15551204 15551354 ATCCGGAAGTGACTGTGAC 59 15551400 15551418 AATGGTCGAGTCACCAGTC 59 NA Drosophila melanogaster 61 Ocho FBgn0040296 FBtr0299779 2 1 1 60 3L 14968723 14968743 AGGATTACTATGTACCAGTGC 57 14968765 14968783 GATGTCCAGAAGAAGGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 2 2 2 62 3L 14786349 14786845 ATCATGAGCGATGAGGGTC 59 14786871 14786889 GTCCAGTGTATAACCACGG 57 NA DesignNoJunction Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 3 7 7 80 3L 14407795 14407884 GAGGCTAAGGAAATTACGATCC 58 14407736 14407756 TCGATCACCCTTCTTTAGACG 59 NA Drosophila melanogaster 61 CG3919 FBgn0036423 FBtr0273239 3 1 1 114 3L 14404808 14404826 CGTAGAGGCAATCCTCGAG 59 14404903 14405146 AAATTGTGTTGCCTCAACGT 59 NA Drosophila melanogaster 61 CG32117 FBgn0052117 FBtr0075905 1 1 1 60 3L 12896254 12896275 CAATTGTTTACGCATTCAACCG 59 12896215 12896235 CTGATTATCCAAGTTGGTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GRHRII FBgn0036278 FBtr0075989 1 1 1 80 3L 12340340 12340358 CCAAGAGGTGTCATAGGCT 58 12335696 12340299 CATGGAAGATGAAGAACTGTGG 59 NA Drosophila melanogaster 61 l(3)neo18 FBgn0011455 FBtr0076023 1 1 1 101 3L 12130867 12130945 CAGATTCGACTCCTTGAGGA 59 12130785 12130803 AATCCTGTGGTACTTGGCC 59 NA Drosophila melanogaster 61 Grip163 FBgn0026432 FBtr0076061 2 1 1 86 3L 11989963 11989981 TGCTAAACAACACCTCCAC 58 11989834 11989916 CAGTGTTCAGGTTTAATCTTGG 57 NA Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0076032 3 1 2 142 3L 11816323 11816341 TGTATGAGGGCGTCAATGG 59 11816447 11816767 GTGCTTCAACTTGACGGTG 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 3 3 6 107 3L 11811263 11811281 AAGGACATTCTACTGCGTG 57 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG33489 FBgn0053489 FBtr0089525 2 1 1 80 3L 11569481 11569499 TTTCATCGAGGTCACATCG 57 11569099 11569440 ATCAAAGGGCTTATCGTATCTG 58 NA Drosophila melanogaster 61 Ufd1-like FBgn0036136 FBtr0076223 2 1 1 93 3L 11115951 11116029 CGGAAAGATTATTATGCCTCCC 59 11115879 11115897 TTTCTTGACGTTGGTCAGC 58 NA Drosophila melanogaster 61 CG7949 FBgn0036107 FBtr0076270 1 1 1 97 3L 10876113 10876131 GGAAAGGGTATTAACCGCC 58 10876241 10876265 CCGGGTCATTAATATTTCTGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 3 4 4 115 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865345 10865363 GGCTTGATATCCGGATTGG 58 NA Drosophila melanogaster 61 CG8003 FBgn0036096 FBtr0076260 1 1 1 103 3L 10655711 10655789 GAGGTGGATTACGGACGAG 59 10655856 10655874 ATTCGCGATCGCAATACTG 58 NA Drosophila melanogaster 61 CG42536 FBgn0260644 FBtr0300949 3 1 1 89 3L 10623025 10623043 ATGCTTTGTTATTGGCGCT 58 10622891 10622973 TACCAATTCGTGTGCAAGAC 58 NA Drosophila melanogaster 61 CG34238 FBgn0085267 FBtr0112432 1 1 1 90 3L 10619700 10619718 GGCCTATGCTATAGGATGC 57 10619772 10619857 TAGCCAACTTAGGTGTTCG 57 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 2 2 2 81 3L 10090895 10090913 ACCAGGAGGATGCTTTCAG 59 10090283 10090854 AGAGATAAAGATGAGACCAGCTG 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0100386,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 8 8 118 3L 9825857 9825876 GAGATTTGAAATGGCCACCA 58 9825956 9826036 TGTGTAGTCCCGGTTAACTC 59 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 1 2 4 163 3L 9707711 9708852 TTGTGCGAAGAAGTGACCA 59 9708979 9708997 GATGTGGTAATTGGTGGCG 59 NA Drosophila melanogaster 61 LanB2 FBgn0002528 FBtr0076382 1 1 1 88 3L 9612734 9612752 ATCAGAATACACCCGCCTG 59 9612804 9612888 TGGCTTGCATTCATTGCAG 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076432,FBtr0076435,FBtr0076433 3 4 4 153 3L 9330624 9330642 TGGCCATTACCTTTATGGG 57 9330758 9330842 CTTCTGGTCACCTTAGTCTG 57 NA Drosophila melanogaster 61 Glu-RIB FBgn0028431 FBtr0076431 3 1 1 80 3L 9259597 9259618 CAAATACTCATCCAACATGTGC 58 9259659 9260111 GTCCATGACCAAACCACTC 58 NA Nonspecific Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076545 1 1 6 101 3L 9043448 9050650 TTGCAAAGCAAACAAGACAC 58 9043366 9043384 CTTCAACAGCGACTTGGAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076543 1 1 6 158 3L 9055561 9057576 TCGATGAAATACGCAAACGT 58 9055422 9055440 GAGCAGGTGGTACTACAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 3 3 3 80 3L 8963988 8964061 GTGGAGTGATCTCTATTTGCG 59 8964101 8964121 GTGACAAGTTCCTGAATTTGC 58 NA Drosophila melanogaster 61 CG13312 FBgn0035931 FBtr0076587 3 1 1 64 3L 8799876 8799894 CAACGACACCCAGATATGC 58 8799488 8799507 CATCGCTATACGAACAGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6776 FBgn0035904 FBtr0076622 1 1 1 80 3L 8512068 8512616 ACATTTGGCCAAAGGTTCC 59 8512659 8512678 TAGGGACAGAACCTCATGGA 59 NA Drosophila melanogaster 61 CG6902 FBgn0035899 FBtr0076657 2 1 1 66 3L 8487231 8487249 GAATAAGATGTCGCAGCGG 59 8484528 8484547 CAACGAAGAAGTTCTTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 1 1 2 82 3L 8195747 8195765 AACAACGTCTTCAACTGGC 59 8195811 8196035 GATACATGCAGCTGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7409 FBgn0035817 FBtr0076810 3 1 1 60 3L 7747700 7747719 ATTGGGATTTGAACGACTGG 58 7747742 7747760 GATCCAACGCGAGATAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13685 FBgn0035816 FBtr0076809 1 1 1 60 3L 7741003 7741022 TTGAACAGATGAAGTTGCCA 58 7741045 7741063 GGATCCGATATCGTCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 2 13 15 84 3L 7703369 7703457 CTTCTCGATAATGACCATAATCCG 59 7703308 7703329 TTTGGTTACCATAATGGGAAGC 59 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 3 4 4 86 3L 7504534 7504620 GACAATGAGCTCACCATCC 58 7504669 7504688 CTGGTAGATGATACGCTGGT 59 NA Drosophila melanogaster 61 CG8541 FBgn0035788 FBtr0076862 2 1 1 60 3L 7464940 7464959 TCCTGCTATTAAGACGACCA 58 7464982 7465000 AATGGGAGTAGCCTGAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 3 2 2 200 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327806 7327824 TTATGATCGTGCCCAGGAC 59 NA InUTR Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690,FBtr0076839 1 2 2 80 3L 7323268 7323289 ATGAAGAGAAGTCCACTGAGAG 59 7323327 7323407 ATTTATAATCTTCCTTGGCGGC 59 NA Nonspecific Drosophila melanogaster 61 CG8607 FBgn0035760 FBtr0076837 3 1 1 226 3L 7313452 7313533 GAAACACCAACTGGATGCC 59 7313723 7313741 CCTCAGCGCGTATAAACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950,FBtr0076951 2 3 3 81 3L 6739712 6739730 ATCTCCTCAAGACGTGTGC 59 6739575 6739667 TTGAAGCCGGTATGTTCGT 59 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 1 2 2 93 3L 6600094 6600113 CACCAACAGGATATTCAGCA 58 6600167 6600243 GAGAGGAATCTTGGCTATCTC 57 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076,FBtr0077075,FBtr0077074 2 3 3 203 3L 5924805 5924823 GCCGATCATTTGGTCATCC 59 5924561 5924580 GAATGTGCAGTAGTTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5146 FBgn0035617 FBtr0077085 3 1 1 116 3L 5577796 5577868 GGATGTGATTTGGACAGCA 58 5577948 5577966 TTGTGGTCAGTAGTTTCCG 57 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 3 4 4 80 3L 4580095 4580113 CCTGCATTGACTCCTATGC 58 4580155 4586595 TATCCTTTGTGAGAACCTCCT 58 NA Drosophila melanogaster 61 CG1311 FBgn0035523 FBtr0073232 3 1 1 80 3L 4279103 4279188 TCCCGTTCATGAGAGTTCG 59 4279229 4279250 ATGTCGTAGTAGTTCTGAACCT 58 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258,FBtr0300621 1 2 2 133 3L 4181198 4181269 ATCATCACTCACCAAGTGC 57 4181083 4181103 CTGAGTTGATCAGAAACTTGG 57 NA Drosophila melanogaster 61 Gr64f FBgn0052255 FBtr0073201 2 1 1 83 3L 4036806 4036824 ATTGTGAGCATTGGACTGG 58 4036869 4036939 AGATGGAGCCATATTCATTCC 57 NA Drosophila melanogaster 61 Gr64a FBgn0045479 FBtr0073194 2 1 1 82 3L 4027621 4027640 GCAGACGAACTATGACTACG 58 4027685 4027758 ACGCTCCGTTGATTAACAG 58 NA Drosophila melanogaster 61 CG32262 FBgn0052262 FBtr0073184 1 1 1 60 3L 3809382 3809400 TGTCCTACATGAAGCACGA 58 3809340 3809358 GACGCAACTAACTTCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32266 FBgn0052266 FBtr0073147 2 1 1 245 3L 3790807 3790826 AATCAGCGGATATACCACCA 59 3791265 3791283 TAGGGATAGGCTCCGTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073186,FBtr0073188,FBtr0073187 2 5 5 107 3L 3722938 3722956 ATGTTCTCCACTCCGAGTC 58 3722512 3722869 GGGATCGTTATCATCGTAGTC 57 NA Drosophila melanogaster 61 eIF5B FBgn0026259 FBtr0073144 3 1 1 80 3L 3447711 3457225 CTAAGATTCCTTACTCTGCTATACG 58 3447655 3447673 CGTGTTCCAACATTGTGGA 58 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 2 1 1 149 3L 3159215 3159291 CTAAGAAGGCGGATAAGCC 57 3159084 3159102 CAATAAGCACCTCCAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1291 FBgn0035401 FBtr0073023 3 1 1 60 3L 3144356 3144377 TTCTATTCTACTGCCACTTTCC 58 3144398 3144416 CGCTTTAGCAGTCCTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-pro FBgn0027082 FBtr0072948 3 1 1 96 3L 2650952 2651028 TTCGTTAAGGTGAATGCCG 58 2650874 2650892 ACTGCAGTAGGTTGTCCTC 59 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072910,FBtr0072909 3 2 2 78 3L 2236097 2236118 GAAATATCCGAGATTAGCTGCA 58 2235963 2236058 CTTCGTTCACCTGTATGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG1927 FBgn0027547 FBtr0072853 1 1 1 80 3L 1967496 1969614 GGTTATTCCATTAAGAACTGCG 57 1967437 1967455 GAAGGCCGGTCTATTAACG 58 NA Drosophila melanogaster 61 CG5687 FBgn0035293 FBtr0072858 3 1 1 81 3L 1935660 1935680 TATGAGTATCTGGGCATTCGG 59 1935537 1935620 TGTAGAAGCACATCTGAATGAC 58 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729,FBtr0302728 3 2 3 123 3L 1804304 1804322 AATACCTCCCAACAGTCGC 59 1804470 1804488 GCATGCATGGATTGTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 2 3 3 102 3L 1621164 1621183 TTGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 CG9173 FBgn0035218 FBtr0072720 2 1 1 60 3L 1422543 1422563 ACCATGAGGTTAATCTACCCA 58 1422503 1422521 CATTCGCAGATGAGGAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835 1 1 2 80 3L 897523 897615 AGTATACAATGATCCTGGCTACC 60 897651 897673 TACTTAAGTAGAGCAGCCTTCTC 60 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565,FBtr0110818 2 3 4 80 3L 444287 444305 TCGGAGAACTATTCCGAGG 58 444135 444245 GATGAAATTGCGATAGTCGTC 57 NA Drosophila melanogaster 61 CG32845 FBgn0052845 FBtr0072518 3 1 1 60 3L 272707 272727 TGAAAGATGGCGAACTATCTG 58 272667 272687 CGCAACAAGATGTGATAACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsp1gamma FBgn0002564 FBtr0072463 3 1 1 80 3L 66651 66670 ATGAGCCTCTAATGTTCGAG 57 66711 66796 AATCGAAGGTCTCGTATTGAG 58 NA Drosophila melanogaster 61 mthl8 FBgn0052475 FBtr0072462 1 1 1 80 3L 25210 25231 ATATGCCCTACTGGCTTATCTC 59 25270 25350 GCCAAACTTGGTAGAATACGA 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2444 FBgn0082987 FBtr0113515 3 1 1 60 2R 15330667 15330686 TCTGATGCTCAGTGAATGTG 58 15330706 15330727 AATGTAGCAAGTCCAACTAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir51a FBgn0033997 FBtr0087364 2 1 1 60 2R 11093162 11093181 ATTTACAACCCATCCCTGAG 57 11093201 11093222 CAAAGCCCAGAATACTAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 2 3 3 134 2R 20853307 20853382 ACTTCGGGAATTCAGTCAC 57 20853191 20853209 CAGGTACCGTTAGTTCGAG 57 NA Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 2 2 2 125 2R 20557254 20557274 CGATGGAGTCCTATTTGTTCG 59 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 CG4681 FBgn0069913 FBtr0301624 2 1 1 72 2R 20466566 20466584 CTGAAGAAGCAGGTCACCA 59 20466428 20466446 GATCCTCTTCCAGAATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 itp FBgn0035023 FBtr0290218 3 1 4 91 2R 20443012 20443030 AAGACCATGTTCTTCCGAC 57 20443084 20443536 CAATTGGCCTTGCATAATCG 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 1 6 6 80 2R 20287859 20287947 AGAAGTCCTTAGTCAAAGATCC 57 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 PebIII FBgn0011695 FBtr0072164 1 1 1 117 2R 19914100 19914118 ATCTATTCGCTCCGAGTCG 59 19914586 19914604 TGGTGTACTTATCCTCGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Adk2 FBgn0022708 FBtr0072163 3 1 1 97 2R 19912575 19912593 GATCGACTCCAACCTGGAC 59 19912654 19912735 GCAATGTGTCGAGCTTCTC 59 NA Drosophila melanogaster 61 CG4324 FBgn0034956 FBtr0072197 2 1 1 92 2R 19904288 19904306 TCCATCTCCCGCAAATCTC 59 19904157 19904233 ACAGTGTAGGTATCATCCGG 58 NA Drosophila melanogaster 61 CG5554 FBgn0034914 FBtr0072126 1 1 1 80 2R 19732787 19732807 GGCAAGTTAATCGAGTTGGAC 59 19732849 19733070 CCATGGAGCAAAGAACTCG 58 NA Drosophila melanogaster 61 CG5357 FBgn0034862 FBtr0072017 3 1 1 60 2R 19345168 19345186 GAGTCCAACCAGTTTACCG 58 19345210 19345228 ACACCAGATCGATCTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044,FBtr0072043 1 2 2 63 2R 19206238 19206256 CACTACGACCATCGTTTCG 58 19206193 19206211 AGTCATTGGATCTCCGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3800 FBgn0034802 FBtr0071994 1 1 1 69 2R 18823653 18823671 ATGTGTCGTGCTACAAGTG 58 18823602 18823620 CAAGTCTTCGAGGTCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 1 2 2 272 2R 18728512 18728592 TTCCGGAGTTCGAATGGAC 59 18728828 18728846 TAGCCAGATGCTCTGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42284 FBgn0259179 FBtr0299663 3 1 1 80 2R 18716119 18716194 TCACAGATAACTTGGAACGC 58 18716233 18716255 GAATTAGTATCCGACTCACACTC 58 NA Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 1 2 2 70 2R 18543371 18543389 GAAACCGTGGAGATGACAG 58 18543250 18543339 GGAAAGCAACAGGATAAAGTG 57 NA DesignRelaxed Drosophila melanogaster 61 Rtf1 FBgn0034722 FBtr0071820 2 1 1 80 2R 18265031 18265051 GACTCCAAGGACTACAGTCTC 59 18265090 18265168 TGAATTCGTATTGACTGGTAGC 58 NA Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112519 3 1 2 81 2R 18217680 18217702 GGTCAGATCTTAAACGAAGATCC 59 18217743 18219689 TTGTAGTTCAAAGCCACGC 59 NA InUTR Drosophila melanogaster 61 CG34204 FBgn0085233 FBtr0112397 1 1 1 108 2R 17684155 17684235 AATAACATTTCTCGAGCCCG 58 17684306 17684324 CACCGCATTTGTGAGACTC 59 NA Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666,FBtr0071667 1 2 2 61 2R 17558178 17558196 ATCGTATCCGAGAAACGCT 59 17558221 17558239 CTGATGTCGGGTATGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42363 FBgn0259709 FBtr0299962 2 1 1 60 2R 17552878 17552896 CAGCCACTGAGATAACGAG 57 17552920 17552938 TTGTATCCGTCAGGAACGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071684,FBtr0071685 3 2 2 61 2R 17538437 17538455 CCTTTATCGAGAGGAACGC 58 17538394 17538413 GGCGCTGTATAGAGATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10321 FBgn0034643 FBtr0071660 2 1 1 71 2R 17522472 17522889 ATAAATACAGCGCAGCCTC 58 17522924 17522942 TCTTGTCAAGCTCCAGGAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 2 2 2 86 2R 17442488 17442506 ACAACATACGGGAGGTCAC 59 17442554 17442710 CGCGAATGATTTGTAGTTTGG 58 NA Drosophila melanogaster 61 Acox57D-d FBgn0034629 FBtr0071607 1 1 1 83 2R 17278537 17278609 CATTGAGCCCAATCAACCC 59 17278656 17278674 ATTCCCGTAGCGATCTCAG 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 3 2 2 100 2R 17109398 17109416 ATATCCTGACAGCAGCTGG 59 17109244 17109334 ATTGCGGTACATCAGTTCG 58 NA Drosophila melanogaster 61 Lrt FBgn0034540 FBtr0302284 1 1 1 81 2R 16547300 16547318 TAAAGTGGTCAATGGCCAG 57 16547363 16547439 AAATCGATAGCTCTCGCCT 58 NA Drosophila melanogaster 61 CG13423 FBgn0034513 FBtr0086217 2 1 1 80 2R 16424669 16424687 TGCCCAAGAAATGCTACCT 59 16424725 16424810 CATATTCACGTAGCTTACTCTTCAG 59 NA Drosophila melanogaster 61 CG13871 FBgn0034502 FBtr0086282 3 1 1 60 2R 16206285 16206305 GAAAGGATTCTCTTAGCTCGT 57 16206327 16206345 GTGCCCTCCAATTGAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13869 FBgn0034486 FBtr0086323 1 1 1 92 2R 16126766 16126785 GCTTTAGAGGCCAATCTCAC 58 16126630 16126713 CGAAACGAACTTGATTACACC 58 NA Drosophila melanogaster 61 CG11044 FBgn0034484 FBtr0086313 3 1 1 80 2R 16121319 16121339 TCAATCTGGTGAATGTGACCA 59 16121381 16121457 ATATGGTGAGCACCTGCAG 59 NA Drosophila melanogaster 61 CG15125 FBgn0034463 FBtr0086471 1 1 1 96 2R 15546239 15546257 CGGAGACTTCTGTAGGGAC 58 15546316 15546424 TGACGGGTACTTAAATCCCA 58 NA Drosophila melanogaster 61 Topors FBgn0034410 FBtr0086570 2 1 1 105 2R 14861660 14861681 CGTTATGTGTACGATAGAAAGC 57 14861746 14861832 TCTGAGCAGGATTGTTTCTG 57 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 1 1 2 220 2R 14419977 14420193 AGATTGGTCTCACCACACC 59 14420377 14420395 AGAGGAATGATGGTTCCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GstE3 FBgn0063497 FBtr0086671 2 1 1 60 2R 14288353 14288373 ACAAGATCGTCAATCTGATGG 58 14288392 14288413 GGATTGATCTTGAGGAACTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM2 FBgn0025583 FBtr0086664 1 1 1 75 2R 14274204 14274222 CTTTGTGTTCGGTCTGCTG 59 14274321 14274341 CCCGTTGATTACCACATTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30323 FBgn0050323 FBtr0273321 3 1 1 60 2R 13741282 13741301 AGGAGTTGAATAGCACTTGG 57 13741322 13741342 CTTACGTAGTAAATCCTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL18A FBgn0010409 FBtr0086947 2 1 1 151 2R 13434479 13434921 AGGGATTGTTGAAGGAGTACG 59 13434348 13434366 GAACTTCTTCAGTTGGCGC 59 NA Drosophila melanogaster 61 Acp53C14c FBgn0053530 FBtr0091496 1 1 1 186 2R 12638635 12638710 CTTCAGCTTGCTTCTGCTG 59 12638467 12638488 GTCCTTAGTCTTAATGGCTCGA 59 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087123 2 1 2 245 2R 12458505 12458706 AAAGATGGCCGATCAAGTC 57 12458210 12458228 GTCTTGACAATCTCGGGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33459 FBgn0053459 FBtr0089859 3 1 1 87 2R 12375705 12375725 TAGTCTCAACACCATGGATGG 59 12375774 12375872 GTAAGCACGAATTCGCTCG 59 NA Drosophila melanogaster 61 CG15710 FBgn0034120 FBtr0087169 1 1 1 60 2R 12235605 12235623 CCATCAATGAATCGCACCT 58 12235563 12235581 GATACTCCAGATCCGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15701 FBgn0034095 FBtr0087131 1 1 1 150 2R 12120372 12120479 AGGAAGTTCAGTACGCCTC 59 12120593 12120611 TAGCTCCTCAGATCACAGC 58 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114474 3 1 3 146 2R 12084063 12084200 ACAGCAAACCAGAAGTTGG 58 12084310 12084328 CAGCATACTTTGAGAGCCC 58 NA InUTR Drosophila melanogaster 61 mRpL34 FBgn0083983 FBtr0111011 3 1 1 113 2R 11986506 11986587 AGGAATGCTCCAAAGGACC 59 11986664 11986682 AAATGGCAGCGTACTTTCG 59 NA Drosophila melanogaster 61 CG8314 FBgn0034057 FBtr0087268 3 1 1 131 2R 11877877 11877966 GCTCTTCACCTTCTATATCGC 58 11877766 11877784 AGCAGGAATATAGTGGCCG 59 NA Drosophila melanogaster 61 CG30321 FBgn0050321 FBtr0087286 3 1 1 108 2R 11680859 11680877 ATGGATGAAGTGGAACGGG 59 11680949 11680967 TATCCTGTGCTATGCGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30467 FBgn0050467 FBtr0087334 3 1 1 117 2R 11426921 11426940 GTTGTCTAGCGCGAATACTG 59 11427020 11427096 AAGTACTTCAGGCGACTCC 59 NA Drosophila melanogaster 61 CG8179 FBgn0034020 FBtr0301638 1 1 1 165 2R 11354266 11354359 GATTGTCATACAGACCGGC 58 11354488 11354506 CTGCATGGACGACTTATGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8157 FBgn0034010 FBtr0087390 3 1 1 136 2R 11213736 11213754 TCAATTTGGACCTGGTGGT 59 11213618 11213636 CTTGACCGCCATATTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10265 FBgn0033990 FBtr0087421 1 1 1 106 2R 10880921 10881024 GACAGGAGATTCACATCTACG 58 10880835 10880853 CTTGGGATTGGTGTACCAG 57 NA Drosophila melanogaster 61 CG10209 FBgn0033971 FBtr0087462 3 1 1 100 2R 10735466 10735712 TCACCATGGATCGAGTGAC 59 10735384 10735403 CCAATACCACTCCTTCTCCT 58 NA InUTR Drosophila melanogaster 61 CG42254 FBgn0259112 FBtr0299540 2 1 1 79 2R 10657913 10657931 GTGGTGTAAACAGCCACTG 59 10657791 10657812 TCGGAATCGCTAGTCATATGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12865 FBgn0033957 FBtr0087435 1 1 1 60 2R 10626499 10626517 GGGTGGTGGAATAGTTGGT 59 10626541 10626559 ACCGCGATTTGTTAGACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087484 2 1 2 80 2R 10527953 10528066 GCTAATAGAGAAGGACAACTTAGAC 59 10527897 10527918 ATCTCATAAATCTCCCGGTACC 59 NA Drosophila melanogaster 61 CG33469 FBgn0053469 FBtr0087504 2 1 1 60 2R 10493430 10493449 TTTCAGATCGCCACATTCAG 58 10493389 10493410 TGGAGAAATATTCTCTGACGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17389 FBgn0033938 FBtr0087490 2 1 1 82 2R 10336448 10336912 TAATGCCAAGTTGTGCCAC 59 10336958 10336976 GACTGAGTAGCTCGTCGTC 59 NA Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112616 2 1 3 87 2R 10229754 10236910 AACTTTCGATCGAATTCCAAGG 59 10236958 10236976 TGTATATGCCATGGTCGGG 59 NA Drosophila melanogaster 61 Aats-phe FBgn0020766 FBtr0087594 2 1 1 80 2R 9857098 9857185 GGTGGAGCAGATCAGTCTG 59 9857228 9857247 CGATAAACAATGCGGAAGCA 59 NA Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 1 1 1 86 2R 9731540 9731558 TCCTGTTCGAACGGATGTC 59 9731401 9731490 ACATGAATGTCCAGAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6209 FBgn0033862 FBtr0087651 2 1 1 60 2R 9550920 9550938 CCGATTGTTCCTAAAGCCC 58 9550878 9550896 TGGTTGTCCCAAGTAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12464 FBgn0033861 FBtr0087652 1 1 1 60 2R 9496442 9496460 AACTTTGAACACAACTGCC 57 9496400 9496418 AATCCGATAGGTGGATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670,FBtr0301389 3 2 2 60 2R 9396197 9396215 GTGGGCTATAACAAGGTGC 58 9396238 9396257 GAATCTGGTGGAACATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4670 FBgn0033814 FBtr0087760 2 1 1 217 2R 9121164 9121182 CGTCTACTCATCCAACCAC 57 9120046 9120983 ATGCCATTGCCTGAAAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12765 FBgn0033813 FBtr0087742 1 1 1 144 2R 9118201 9118221 TCCGTAGTAAAGGGAAATGTG 57 9118387 9118406 TCATACCGCATGCTAATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 3 3 3 93 2R 8527411 8527429 TAGAGGATCGCTTTCTGGT 57 8527486 8527565 GGAGAAGCTCTTATAGCCG 57 NA Drosophila melanogaster 61 CG30047 FBgn0050047 FBtr0087905 1 1 1 80 2R 8241558 8241637 TACACGATCGAGGATACTATTGG 59 8241673 8241695 AGAATAGGTAGCAGAAGTACAGG 59 NA Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 3 2 2 105 2R 7540579 7565721 TCAAGTTATGGATTCCTGCCT 59 7540494 7540512 GTGAAAGGAGTGGTTGCAC 59 NA Drosophila melanogaster 61 CG30022 FBgn0050022 FBtr0289990 3 1 1 132 2R 7275407 7275518 GTTGAAGTATGCCATCAACAC 57 7275295 7275313 TTCATTCAGGTGACGATCC 57 NA Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 1 2 2 72 2R 7157767 7159891 TCTTAAGTGGGCTCTGGTG 59 7157713 7157732 GGGCAGGTATTTGTTATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 Taf5 FBgn0010356 FBtr0088240 2 1 1 60 2R 6765805 6765824 TATCAATGTGCGTATGCTGG 58 6765764 6765782 GTGACCCATTAAGCTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf5 FBgn0010356 FBtr0088240 1 1 1 60 2R 6765175 6765197 GGATAACAATCTAACTCTGTGGG 58 6765137 6765159 GTGATTGCTGATATAGTCTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 3 2 2 81 2R 6706100 6706120 AAATGGTCACAATCAGAGCTC 58 6705984 6706062 CGGAGTATCTCCATAATTATTCCG 58 NA Drosophila melanogaster 61 CG12341 FBgn0033550 FBtr0088251 1 1 1 80 2R 6700500 6700521 CAAATCCGGCTATAGAATACGA 58 6700387 6700459 CCAATATTCATGGACGCCA 58 NA InUTR Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299830 1 1 17 60 2R 6172268 6172287 AGACGTACAAGGTTTCCAGG 59 6172918 6172936 GATTCGGAATCTGTGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 1 16 17 80 2R 6192538 6192559 GATTGATGCCAACTGGTATGAG 59 6192597 6192987 CGACTGACAATCTCAACATAGC 59 NA Drosophila melanogaster 61 CG30008 FBgn0050008 FBtr0088380 1 1 1 80 2R 5777491 5777568 GCGTCAGCAAGTATAAATTTGC 59 5777608 5777627 CAGCACTGTGATCATGTACC 58 NA Drosophila melanogaster 61 CG1698 FBgn0033443 FBtr0088474 2 1 1 91 2R 5683392 5683815 CATGAGAGGCATTGGATATGG 58 5683868 5683886 CGAAGTAGCGTAGGGTGAG 59 NA Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 3 2 2 81 2R 5471135 5471153 CTGCTAAAGAACCAACCCA 57 5471017 5471092 CAGGATCTGTAAGGATTTCCC 57 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672,FBtr0112673 3 4 4 80 2R 5460475 5460493 CAATACGATTCCTTCGGCG 59 5460279 5460434 GGCATATTACCTAACATGGAGC 59 NA Drosophila melanogaster 61 Myd88 FBgn0033402 FBtr0088598 1 1 1 80 2R 5192788 5192806 CACAGAGGAGTTTCTTCGG 57 5192653 5192746 CGAGTGTGATTCTCAATCTGG 58 NA Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 1 2 2 128 2R 5010060 5010134 GGAATTTGTCAAGCTAAACCC 57 5010224 5010242 TAGAGTTGGTCATTCCCGG 58 NA Drosophila melanogaster 61 Mys45A FBgn0033379 FBtr0088628 1 1 1 94 2R 5000832 5000912 GAAGCTCAATTCGAGCCTG 59 5000756 5000775 GCTCGATCATGATATCAGCG 58 NA Drosophila melanogaster 61 CG30349 FBgn0050349 FBtr0088650 1 1 1 85 2R 4796518 4796593 GATCAGGCGATGATACAAGC 59 4796641 4796659 ACATAATCGAGCGGTAGCC 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638,FBtr0088637,FBtr0088639 1 4 4 80 2R 4762304 4762322 CCGTCGAGATCAATCAGGT 59 4762365 4762456 TGAGCTTGATTAGAGGGAGG 58 NA Drosophila melanogaster 61 spaw FBgn0050365 FBtr0088773 2 1 1 60 2R 4247140 4247164 GATAGAGAACGGTACAAAGTTTCTG 59 4247104 4247122 GCATAAGTAAGCGGGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809 2 1 2 82 2R 4047503 4047574 TACAAGACGGATGACGGTC 59 4047439 4047459 AGGACATAGAAGGAATTCGGA 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088837 2 1 4 165 2R 3700675 3700693 GCATGGATGACATAGCCAG 58 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 boca FBgn0004132 FBtr0088953 3 1 1 90 2R 3453844 3454026 CAATGGGAGGAAGATGAAGAG 58 3453774 3453792 TGTCCAGATTGCTCAGGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1707 FBgn0033162 FBtr0089013 2 1 1 178 2R 3283223 3283309 GTCCACCAAGGACTTCCTC 59 3282991 3283009 GATCCTTAGGCACATCGGT 59 NA Drosophila melanogaster 61 CG17002 FBgn0033122 FBtr0086170 1 1 1 102 2R 2874431 2875153 CCAGCAGAAACACGATGAC 59 2875311 2875329 CTGGTAGAAGACCGTTCCC 59 NA Drosophila melanogaster 61 Mob4 FBgn0259483 FBtr0086141 2 1 1 82 2R 2583333 2583411 GTACTTCCCTAGCAGGGTG 59 2583269 2583287 AGAAGATGCGATACACCCG 59 NA Drosophila melanogaster 61 Tdc2 FBgn0050446 FBtr0086142 1 1 1 88 2R 2573280 2574178 GTAACCAAGTCAAGCTGGG 58 2573210 2573230 GGACTCGTTGATTATGCTCAG 59 NA Drosophila melanogaster 61 CG15233 FBgn0033076 FBtr0086155 3 1 1 86 2R 2488433 2488451 TGTCTTGCTCTTGATGCCA 59 2488120 2488247 TCGATGTAACCCTTTAGGTCC 59 NA Drosophila melanogaster 61 CG7881 FBgn0033048 FBtr0086033 1 1 1 82 2R 1849516 1849536 CAATAGTGAATGGCATTGGCA 59 1849201 1849472 TCGTGAGTCCGATTCAGTG 59 NA Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111292,FBtr0111291 2 2 2 165 2R 559596 559615 AACACAAAGCATTTCAGCTC 57 559801 559819 TCCAACCGTTTCTTGAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111291 3 1 2 104 2R 560473 560492 CAATCTTTGTAACAGCAGCG 58 560554 560628 CTTCTGGTATCACTGATAAGAGAC 58 NA Drosophila melanogaster 61 snRNA:U4:38AB FBgn0003931 FBtr0081292 3 1 1 70 2L 19810773 19810791 ACTGAGGTGCGATTATTGC 58 19810825 19810843 TGGACGGTATTTCACGTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht3 FBgn0250907 FBtr0111127 3 1 1 102 2L 22908703 22908778 CTTGTGGTGGTAGTCTTGG 57 22908619 22908638 CAGAACGTATGAATGCAGGT 58 NA Drosophila melanogaster 61 CG15477 FBgn0032865 FBtr0081380 1 1 1 77 2L 20544655 20544673 TAATTTGGTGGGACTGCCA 59 20544714 20544732 GGACACATCACTAGGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081338 1 1 2 151 2L 20097164 20098029 GGCATCCAAATTAACTTCAGGT 59 20097034 20097052 TCTTCAGTCGAAGTCTCCG 58 NA InUTR Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0081318,FBtr0300966 3 3 3 80 2L 19778937 19779027 GGGACAGAACATCAACAACC 59 19778876 19778896 TTAAGGTCCAAGGATAGCTCC 59 NA Drosophila melanogaster 61 CG10137 FBgn0032800 FBtr0081248 1 1 1 87 2L 19528928 19529098 CACACCAGTATCTTATACCTGAG 58 19529145 19529163 AAGTACTGCGAGGATGGAG 58 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 1 2 4 194 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387584 19387602 CCGATAGATCCGGAAGCTG 59 NA Drosophila melanogaster 61 CG17572 FBgn0032753 FBtr0081173 3 1 1 82 2L 19073671 19073960 GAGAATTCGAGAAACTCCTGG 58 19073609 19073627 TCCAGTAGTCTCGTTGCTC 58 NA Drosophila melanogaster 61 CG10431 FBgn0032730 FBtr0081134 1 1 1 60 2L 18974806 18974825 CAGCCATAAGTATGTGCACG 59 18974845 18974923 CTTCCGTTTGAATGGAAATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31752 FBgn0051752 FBtr0081119 1 1 1 97 2L 18840973 18840993 CTAACCATGAAGACCATGCTC 58 18840730 18840919 GTGTTCTATGACTGGTTTCTTCTC 59 NA Drosophila melanogaster 61 CG42490 FBgn0086200 FBtr0300445 3 1 1 80 2L 18666557 18666577 GGAAGTCAGTGATCCAAACAC 59 18666616 18666700 CGAGGACAGTAGTAGACATGAG 59 NA Drosophila melanogaster 61 CG31802 FBgn0051802 FBtr0081058 3 1 1 60 2L 18209115 18209135 GACTTGGTAGTATGGTGTCCT 59 18209075 18209093 CTGCTTGAGATCGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021,FBtr0081022 1 2 3 110 2L 17969450 17969468 ATGAATCCCGAGTACAGGC 59 17971895 17971913 CATGATGAACTTGTGGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 2 1 1 112 2L 17590701 17590719 GATTCCCTATGCCCATTCG 58 17590793 17590873 GTCTTCTCAACTCCTCGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31784 FBgn0051784 FBtr0302499 2 1 1 81 2L 17124158 17124176 TTGTTCAGCATCGTTTGCA 59 17124033 17124051 TATTCAAGGACACGGAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt36Ba FBgn0040262 FBtr0080909 1 1 1 60 2L 16794444 16794462 TTGTGGTGCCTATGAAGGA 58 16794486 16794504 GCCATTTCGGTCATTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5968 FBgn0032588 FBtr0080872 2 1 1 60 2L 16549704 16549722 ATTCCTGCAGAAACTCGAC 57 16549606 16549626 CATCAATGTCTCGAAGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 wek FBgn0001990 FBtr0080764 1 1 1 81 2L 15768153 15768171 GTATACAAAGTGCGCGAGC 59 15768030 15768108 GTTCCTCGAGGGTCATCTC 59 NA Drosophila melanogaster 61 lace FBgn0002524 FBtr0080738 2 1 1 96 2L 15503139 15503158 TAATGTGGATCCGAAGGAGG 59 15503215 15503299 AATCAGTTTCTTGGATCCAGC 58 NA Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089699,FBtr0089700 1 2 2 60 2L 15485007 15485026 CAAATCTCCGGTGATAGGTG 58 15485048 15485067 GTCCACAATGCTGAACACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sna FBgn0003448 FBtr0080739 2 1 1 62 2L 15478047 15478065 ATTGTCTTCGTGGAGGAGC 59 15478003 15478021 CTGTGAGTCCTTGGTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nht FBgn0041103 FBtr0300021 2 1 1 60 2L 15318460 15318478 GGTCACGATGATGTTCCTC 58 15318418 15318436 CTCGTCATCCGATGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15262 FBgn0028852 FBtr0080733 3 1 1 60 2L 15298936 15298957 AATCGAGGAAATGCATGATGAG 59 15298978 15298996 CATGTCGCCAGCATATGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 3 1 1 78 2L 14871877 14871896 TAAGTTTACGCGATGAGCTC 58 14871765 14871837 CATTGCGAACGTAGGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463 1 1 3 143 2L 14274924 14277316 CTCTTGACCAATCTCAGTGGA 60 14277482 14277500 CTCGTCCTTCGAGTCAGAC 60 NA InUTR Drosophila melanogaster 61 nimB1 FBgn0027929 FBtr0080585 2 1 1 170 2L 13964585 13964604 AAGGATATCGCTACGACGTG 59 13964736 13964813 CGTATTTGCCGCAGAATCTC 59 NA Drosophila melanogaster 61 CG5705 FBgn0032486 FBtr0080444 3 1 1 60 2L 13220155 13220173 GCTGAGCATTCAGAACGAG 59 13220196 13220215 GTAGTATTCCTGGCGTAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 1 2 2 93 2L 13014015 13014033 TCGAGGATAAAGCGACTGG 59 13013875 13013963 GGTTGGTAACATAGATTTCGTGAG 59 NA Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0301163 1 1 2 60 2L 12714678 12714698 AAAGTCCTGTCTTTCACTGGT 59 12714536 12714656 TCGCTGATTGCCTTAAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642,FBtr0112643 1 2 2 190 2L 12623012 12625465 ATCGAATGCTTCCGATTGC 59 12625619 12625637 ACTGATGGTGGTTCAGGTG 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 3 3 4 82 2L 12407461 12407564 ACTTCCACCATTAAGGTTGTC 58 12407399 12407417 ACCTTAAAGACGCTGTTGC 58 NA Drosophila melanogaster 61 CG17217 FBgn0032419 FBtr0080341 3 1 1 83 2L 12170882 12170963 GATCTATATCGCAAATGGTATGGAC 60 12171003 12171022 CTGTTCATCCTCGGAATTGC 59 NA Drosophila melanogaster 61 CG16996 FBgn0032412 FBtr0080334 1 1 1 60 2L 12109975 12109996 CGTGATCAATGACTTGTACACC 59 12110015 12110035 CGTGTAGATCATTCCGATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 1 3 3 169 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105115 12105187 GTTGGTGGAGATACCCTCG 59 NA Drosophila melanogaster 61 prd FBgn0003145 FBtr0080299 1 1 2 147 2L 12085077 12085151 CTCTACCTAACATGAACAGCG 58 12084950 12084968 AGCTGTCTGGAGATCACAC 59 NA InUTR Drosophila melanogaster 61 CG18788 FBgn0042126 FBtr0289986 2 1 1 95 2L 12035124 12035205 CTTGGGATTTACCTTAGTTTGC 57 12035260 12035279 GAGTTGCTAGTATTGCACCT 57 NA Drosophila melanogaster 61 CG16964 FBgn0032385 FBtr0080282 1 1 1 154 2L 11947991 11948009 GAATTCGAGCTCAGAGCTC 58 11948197 11948215 TTTCTTCGGAACTTGCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 cmet FBgn0040232 FBtr0080215 3 1 1 107 2L 11267042 11267164 AAGGGTCCCTTAACAACGG 59 11266953 11266971 TAAACCCTGCACCTCTTCG 59 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 1 2 2 80 2L 11007423 11007508 ATATTTCCTCGACTACTCGAGTG 59 11007548 11007566 TGTTGCCCATCATGATGGT 59 NA Drosophila melanogaster 61 CG17105 FBgn0032280 FBtr0080106 2 1 1 71 2L 10681056 10681074 TATGCACTCTGCGCTATCC 59 10681109 10681127 AAAGCCACCGTGTATACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5198 FBgn0032250 FBtr0080026 1 1 1 80 2L 10436127 10436148 AGAGGAATCCTTCAAGAAACAC 58 10436184 10436266 CTATCATTGAGGTATTCCCTTTCG 59 NA Drosophila melanogaster 61 CG4972 FBgn0032217 FBtr0079988 3 1 1 80 2L 10316859 10316941 GGACAGTTGGCCATTAAGG 58 10316982 10317003 ATCCTTCACGTCGTTATTATGC 59 NA Drosophila melanogaster 61 Cdk5alpha FBgn0027491 FBtr0080063 2 1 1 132 2L 10309476 10309494 ATGTCGAACCACAACAAGC 59 10308941 10309380 AAGTGGAGGCCTGAATGAC 59 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 3 5 5 81 2L 10296850 10296948 CGTTTCTAAAGCTAAGCTCGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 CG4036 FBgn0032149 FBtr0079870 3 1 1 137 2L 9791684 9791762 CCTATGCCAAACCTCTCCT 58 9791863 9791881 GCCATTGATGTACATGGGC 59 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 1 4 4 80 2L 8688964 8688983 AGGATGTGGGTATCGATGAC 59 8688840 8688923 CATTAAGACCCTTGGCATTGG 59 NA Drosophila melanogaster 61 CG34010 FBgn0054010 FBtr0100065 2 1 1 80 2L 8009951 8009971 TTATGGAGAACAATCTCGCTG 58 8009837 8009913 TACCATGAGGAGATCTTAGACAC 59 NA Drosophila melanogaster 61 CG7191 FBgn0031945 FBtr0079485 2 1 1 177 2L 7771595 7773076 TCCCGGCGATGAATTACTC 59 7773217 7773235 GAGCAAAGCGGATTTGTCC 59 NA Drosophila melanogaster 61 CG6739 FBgn0031926 FBtr0079472 1 1 1 102 2L 7615880 7615899 AGTGGTAACATCCCTAGGAG 58 7615961 7616131 GGGACAATCAATTTGCTTATCG 58 NA Drosophila melanogaster 61 chm FBgn0028387 FBtr0079443 1 1 1 80 2L 7413999 7414084 GACTCGAAGGTAAAGCTGGA 59 7414127 7414145 ATCATAGTCAGGCACCAGG 58 NA Drosophila melanogaster 61 sens-2 FBgn0051632 FBtr0079341 1 1 1 72 2L 6823040 6823058 CAAGAAGCGAAACTCCGAC 59 6831201 6831222 CGTTAGTTGTTCAGTCTTGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13998 FBgn0040949 FBtr0079241 2 1 1 60 2L 5956783 5956802 GCTAAGACGATGACGTTCTG 58 5956742 5956761 GCCAGGTTGGATTTAAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9044 FBgn0031752 FBtr0273412 1 1 1 80 2L 5951981 5952059 GACACGTTAACTGAAAGGACG 59 5952100 5952119 CAAGGTGTTGGACCTAACAC 58 NA Drosophila melanogaster 61 CG14005 FBgn0031739 FBtr0079160 2 1 1 134 2L 5801779 5801797 CATACCCTCCTACACGGAC 59 5801600 5801684 CGATCGTTCAAATACTTGTTGC 59 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 2 3 3 100 2L 5307903 5308029 GCTTCTAACTTGCATCCGT 58 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 Cyp4ac3 FBgn0031695 FBtr0079068 1 1 1 127 2L 5268888 5268906 TATTGTTCGTGCCGAAGAC 58 5268997 5269065 GCCATTTCTGGTCTATGCT 57 NA Drosophila melanogaster 61 vkg FBgn0016075 FBtr0079036 2 1 1 82 2L 5013430 5013510 ACAGTTACTTCATGAGCACC 57 5013367 5013385 GAACTCCTCCAAGCAAGAG 57 NA Drosophila melanogaster 61 CG31773 FBgn0051773 FBtr0077509 2 1 1 60 2L 3914133 3914152 GTAGAAGGAGTTCCCATCTG 57 3914092 3914111 AAGAAATTCTGGCTCGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp24C1 FBgn0259956 FBtr0300302 3 1 1 87 2L 3700749 3700826 TGGGATATGGAAATTCTGTCTG 58 3700871 3700892 GAAGCTACGAAAGTAAATCCTC 57 NA Drosophila melanogaster 61 CG16713 FBgn0031560 FBtr0077547 3 1 1 108 2L 3695219 3695293 AATGCAATCTGTGGTCTACC 58 3695130 3695148 ATTTGACGCACTCGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 cnir FBgn0243513 FBtr0077666 3 1 1 85 2L 3039578 3039650 TTTACTATGTCCTCACACTGG 57 3039513 3039532 TATTACCCAGAAGTTGAGGC 57 NA Drosophila melanogaster 61 CG3165 FBgn0031484 FBtr0077642 3 1 1 81 2L 2977519 2977595 AGAGAATAACAGGTCTGAGCA 58 2977638 2977656 AAACTGACGATGAGTTGCG 58 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 1 3 3 107 2L 2866731 2866821 TGGAAGACCAAGGTTCCAG 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 3 1 1 60 2L 2848406 2848427 CACTATGATTCGAACATCTGGT 58 2848447 2848525 AAATTCCATCTTGCGTTCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG2975 FBgn0031468 FBtr0077619 3 1 1 98 2L 2842010 2842028 TCGCTTCATTCCTTTCTCC 57 2842089 2842170 CAGTCACTGGAGTTATCTGG 57 NA Drosophila melanogaster 61 CG34314 FBgn0085343 FBtr0112512 1 1 1 118 2L 2574886 2574904 TAAAGCAGAGTCCAACAGC 57 2574726 2574744 AGTTGTGGTCGTCCAAGAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15390 FBgn0031419 FBtr0077764 3 1 1 73 2L 2374809 2374887 CTTACATCACATAAGGCACTTGG 60 2374920 2374938 TGATGGCTTCATCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31949 FBgn0051949 FBtr0077757 1 1 1 60 2L 2300636 2300657 TGTCCTTTCATTTATAGCCGAG 58 2300678 2300696 CCACTTTCTTATGTCCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31668 FBgn0051668 FBtr0113412 2 1 1 80 2L 2205761 2205783 GAATGACTATATGATGGGATCGC 59 2205632 2205721 ACCGCAGATATACAGCTCG 59 NA Drosophila melanogaster 61 CG33172 FBgn0053172 FBtr0074092 2 1 1 80 X 15665099 15665205 AACACTGCATAGAGATCGCT 59 15665248 15665266 TCTATATGCAGCTGGTGGG 59 NA Drosophila melanogaster 61 drd FBgn0260006 FBtr0100009 1 1 1 80 X 15020371 15020392 TGGAAATTACACGATACACCAG 58 15020431 15025612 TACAAATAGGCCCTTTCATCC 57 NA Drosophila melanogaster 61 CG32663 FBgn0052663 FBtr0073563 2 1 1 95 X 11720413 11720431 GAGATCATTACGCACGCTG 59 11720490 11720582 GTTCAGATTGGAACCGCTG 59 NA Drosophila melanogaster 61 CG15194 FBgn0030302 FBtr0073501 1 1 1 113 X 11354103 11354121 CAATCACATCGGACTGCTC 58 11354720 11354738 TTGGGCGTCTGGATATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Bx42 FBgn0004856 FBtr0071350 1 1 1 85 X 8999982 9000268 ATATCCACTAGGTCTGGGAG 57 8999916 8999934 TAACCTTTCCCTTGTCGTC 57 NA Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0070546 1 1 2 115 X 2787182 2787262 ACATGAACTGAGTGGTTCG 57 2787341 2787359 AGCGATAGAAGGTCATCCT 57 NA Drosophila melanogaster 61 CG2187 FBgn0017448 FBtr0085861 1 1 1 80 3R 27582879 27582897 CGTGACAAATTCGTTCCTG 57 27582761 27582836 ATGTTCATGCCAGTAACCTG 58 NA Drosophila melanogaster 61 spdo FBgn0260440 FBtr0085651 3 1 1 122 3R 26303889 26303986 TAGCACACCTCGGAAAGTC 59 26304072 26304090 TATAGCTCCTGTTCGGCAG 59 NA Drosophila melanogaster 61 CG17930 FBgn0038416 FBtr0083271 2 1 1 88 3R 12153792 12153810 CAACCACGGTGATCATCAC 58 12153862 12153940 AAAGAGAAGGGTAGCTGCT 58 NA Drosophila melanogaster 61 CG42393 FBgn0259739 FBtr0300044 1 1 1 87 3L 18036132 18036153 CATCCTTTACTCGATGGATGTG 59 18036199 18036294 CTTTGAGTTCAGGTGGATTCC 59 NA Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 1 2 2 101 3L 8418955 8419517 GGTAACAGCACATTGGTTCC 59 8419580 8419599 GATAGTGGTCTTTAGGGCCA 58 NA Drosophila melanogaster 61 CG13678 FBgn0035859 FBtr0076700 1 1 1 73 3L 8215260 8215280 CATCTACCAAGTGACAATCCA 57 8215567 8215585 CAGCGAAGAAGATAGCAGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15005 FBgn0035508 FBtr0073255 1 1 1 136 3L 4204129 4204147 GTTTAGTTCGCGCTTTGTC 58 4203144 4203162 GACTCAGTCTTAGGCGTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0110858,FBtr0089864,FBtr0110856 3 4 4 92 3L 2137390 2137408 GATCAACAACCAGAGCGTC 58 2136047 2137334 TTCTCGAGCAGCTCTATGG 59 NA Drosophila melanogaster 61 CG1231 FBgn0035134 FBtr0072546 1 1 1 60 3L 356919 356938 GTGCAATCTGGACCTTACCT 59 356959 356979 GTGCTTCCGACCTAAATAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk12 FBgn0034730 FBtr0071830 2 1 1 80 2R 18316677 18316813 CAGAGTTCTTGTCAAACGTC 57 18316856 18316874 AGTATAGGATCTCGGCCAG 57 NA Drosophila melanogaster 61 Vha14 FBgn0010426 FBtr0087341 1 1 1 61 2R 11567290 11567308 TAAGCGGGACGATATCGAC 59 11567247 11567265 CATGACGAATAAGCTCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30471 FBgn0050471 FBtr0087333 3 1 1 137 2R 11423919 11424004 CTTCTTTACCATCAGTGGCT 57 11424104 11424122 AATCTCAGGTAGCGATGGA 57 NA Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 2 2 2 91 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848325 5848344 GGCCTTGTCGAAACTTACAG 59 NA Drosophila melanogaster 61 CheB38a FBgn0067312 FBtr0081453 2 1 1 80 2L 20817986 20818060 GGAACCAAAGGTACTGTCC 57 20817924 20817945 GCGATAAATTGGTCCAATTACG 58 NA Drosophila melanogaster 61 CG17324 FBgn0027074 FBtr0300818 1 1 1 86 2L 18820945 18821030 CTGTACAACATGATTACCCAACC 59 18821076 18821094 CACGATCTCATTGATGGGC 58 NA Drosophila melanogaster 61 CG13393 FBgn0032035 FBtr0079719 1 1 1 60 2L 8383875 8383893 GTTTGTTTACTGCTGCCTG 57 8383833 8383854 GATGAAACCAGATAGGAAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0301087,FBtr0077951 3 2 2 60 2L 1038041 1038060 CCTCTTGTACATCGATCAGC 58 1038083 1038101 GAAGATGTACGTCGACGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-21Ca FBgn0040107 FBtr0077998 3 1 1 60 2L 624764 624787 GCGCCAGTACTTAAGTATATTTCC 59 624805 624824 CTTCGTTAGCAGAGTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ipk2 FBgn0031267 FBtr0078074 2 1 1 60 2L 573292 573312 TCGACTTTGCTCATGTTTACC 59 573252 573270 CCGAACATGTAGTTCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16956 FBgn0032523 FBtr0080520 3 1 1 104 2L 13414391 13414465 CAGTTGGGACAAGTACCGT 59 13414305 13414323 TTCGAAGTCAGGAGCTACC 58 NA Drosophila melanogaster 61 CG11113 FBgn0033165 FBtr0113048 1 1 1 121 2R 3289390 3289463 ACACATTGCCATTCTCTACCT 59 3289546 3289564 TGTCAATCGTGTCCGAGTC 59 NA Nonspecific Drosophila melanogaster 61 CG18292 FBgn0030269 FBtr0073437 1 1 1 61 X 11032174 11032193 TTCTACAATTACCAGCAGCA 57 11032217 11032235 GCCGATATCTGGATTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 3 1 1 62 2R 16948710 16948788 AAATCAAACCGGATTCGGA 57 16948811 16948832 GAACTATGCCTTCCGTATTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281,FBtr0088308,FBtr0088307 2 4 4 104 2R 6360055 6360073 GAACCTCACCGACAAACAG 58 6359710 6359987 TGAACCATGATAGGCTGCA 59 NA Drosophila melanogaster 61 Tsp42Eg FBgn0033128 FBtr0089024 2 1 1 127 2R 2919299 2919318 AATTCGAGCACTTCAACACG 59 2919405 2919840 AACAACGAACACCTTAGATGTG 59 NA Drosophila melanogaster 61 CG3270 FBgn0033093 FBtr0086123 2 1 1 127 2R 2581046 2581064 CCTGATAATAGGTGGCGGT 59 2581155 2581482 TAGATGCGCTGGTGTAACC 59 NA Drosophila melanogaster 61 His4:CG33905 FBgn0053905 FBtr0091909 1 1 1 60 2L 21434847 21434865 CGTAATTCGTGATGCCGTG 59 21434805 21434824 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Reps FBgn0032341 FBtr0080230 1 1 1 80 2L 11106002 11106075 GTGATTGAGATCACCGGTC 58 11105940 11105960 CTTCAGGCATGAGTAGAACTG 58 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 1 3 3 96 3R 19633219 19633303 ATTCACAATCTCACCAGCGA 59 19633142 19633160 GTTCAACAGAACCGAGCAC 59 NA Drosophila melanogaster 61 TwdlV FBgn0037227 FBtr0078976 3 1 1 125 3R 80506 80585 GTGGATTCATTGTCCTATGCC 59 80672 80690 CTTGGAAGAAGGAGCCTCC 59 NA Drosophila melanogaster 61 ssp2 FBgn0036389 FBtr0075759 2 1 1 111 3L 13964106 13964124 TGCCAAGACCTAGTTTGGG 59 13964198 13964278 AATACAGCGGAGTCATCCTC 59 NA Drosophila melanogaster 61 CG10050 FBgn0037492 FBtr0081577 2 1 1 79 3R 3075669 3075749 GAGAAATGCAAACGACCCG 59 3075792 3075810 ACAATCTGTGAGGACACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 1 2 2 83 3L 14555087 14555158 AGAGACATTTGAGGAAGCGA 59 14555204 14555222 AAATTGATGCATGCCACGG 59 NA Drosophila melanogaster 61 spn-D FBgn0003482 FBtr0085116 1 1 1 85 3R 22991749 22991769 ACTTTGGAGGTGGAATATCCT 58 22991816 22991891 AAGTTGCAAGCACATTTGC 58 NA Drosophila melanogaster 61 Osi8 FBgn0037415 FBtr0078598 2 1 1 81 3R 2081402 2081423 CAGGTCCTAAACAACATGATCC 59 2081462 2081776 CCTCGTTATCGAATTTCACCTG 59 NA Drosophila melanogaster 61 tRNA:R:12Ef FBgn0011953 FBtr0073871 1 1 1 60 X 13997798 13997816 GGCCTAATGGATAAGGCGT 59 13997756 13997774 CGTGACAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 2 1 1 78 X 20052302 20052946 TAATAATCGGCGATAGCGG 57 20052242 20052262 ATGTAACTGCCTGAGAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9571 FBgn0031086 FBtr0070032 2 1 1 60 X 19985701 19985722 CCTCATTCTCATTTCATTCAGC 57 19985662 19985682 TATGATGATATGGCTCCTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubqn FBgn0031057 FBtr0074750 1 1 1 106 X 19579915 19579933 CTTTGTCAACCGTGATGCC 59 19580080 19580100 GTTAACTCAAGGACAACTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 inx5 FBgn0030989 FBtr0074698 1 1 1 90 X 19063906 19063924 CTTCACCACCGACTACGAG 59 19063541 19063853 GTTCACCACACTGATGAGGA 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 1 2 7 197 X 18007408 18007491 AAGAAACTCAGGTTGCTGC 58 18004576 18004594 CTTATCGCCCTCCAAACTG 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 1 3 7 168 X 18007406 18007489 GAAACTCAGGTTGCTGCTG 59 18003569 18003592 CTCGTAATACTCTTCGCAAATCTC 59 NA Drosophila melanogaster 61 sing FBgn0261245 FBtr0074318 3 1 1 114 X 16573843 16573861 GCTCATCCAGTTACATGGG 58 16573938 16574031 GCATAGCCCATGTAATAGCA 57 NA Drosophila melanogaster 61 eIF-2alpha FBgn0004925 FBtr0074300 1 1 1 128 X 16340310 16340328 CTCCTGCTACGGTTACGAG 59 16339901 16340222 GATGTGGTCATTACATAGAGTGG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 1 9 9 80 X 16270053 16270134 AGAGAACGAGGTGAAATGGA 58 16270177 16270195 GTGGGTAAGTCCTGGTACG 59 NA Drosophila melanogaster 61 drd FBgn0260006 FBtr0100009 2 1 1 80 X 15020379 15020397 ACACGATACACCAGATGGA 58 15020439 15025620 CAATGTTGTACAAATAGGCCC 57 NA Drosophila melanogaster 61 CG11162 FBgn0030509 FBtr0073811 3 1 1 87 X 13571585 13571604 ATTCGATGAGCGATCATACG 58 13571653 13571742 TAGTTGAACTTGGCATGGTG 58 NA Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 1 2 2 86 X 13304291 13304382 TGCTAAAGGTGATCTGGTG 57 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG12716 FBgn0030439 FBtr0073752 3 1 1 118 X 12869514 12869597 GAAACAAGTCCTGAGAATCCTG 59 12869417 12869437 TTGAAATTGAGGCGTTGAGTG 59 NA Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 3 2 2 81 X 12837476 12837559 TATTTCTGGTCTATCGAAGGGT 58 12837601 12837619 ATTCAACTCCTGGATGGCT 58 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 1 1 1 69 X 12600719 12600737 TATCTTTGCCGTACTGCTG 57 12600770 12600923 AAATGAGCGGCAGATTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073661,FBtr0301830,FBtr0301831,FBtr0073659,FBtr0073660 3 5 5 73 X 12482044 12482064 TGAAAGGTCTCAAATACGACG 58 12481922 12482009 GCGTCCAATGATCTCACAC 59 NA DesignRelaxed Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0273235,FBtr0073522 2 4 4 81 X 11562937 11563029 CGCATTGTATACCACGAACTG 59 11563071 11563090 TCTCCAGTGTGAATCGAGTC 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 2 4 4 80 X 11055271 11055357 TGAGTACAGAGACGACATGAC 59 11055397 11055417 GCATAGTGTAGCAGGTTTGTG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 2 5 5 151 X 11027593 11027611 TAATGGAAAGGTGCAGGAC 57 11027384 11027478 GAAGATCGAAGACCTTGCC 58 NA Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 2 2 2 80 X 10774599 10775516 AAAGTGAAGCCTGTGTACAC 58 10774538 10774556 GTACATGCTCAGATCCGGA 59 NA Drosophila melanogaster 61 CG1628 FBgn0030218 FBtr0071510 1 1 1 95 X 10493289 10493308 GATTGAGCTCGACTTTCCTG 58 10492957 10493231 ATTGATCATCCCTGCGGAG 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071410 3 1 4 91 X 9893325 9894395 ATCACCAAGGAAATCGACTC 57 9894448 9894467 CCGGCCAATATGGTATTCAG 58 NA Drosophila melanogaster 61 CG3099 FBgn0030145 FBtr0071365 1 1 1 167 X 9514408 9514426 CTATTGAAGAGCGCAGTCC 58 9514554 9514636 GAATGTGCAGTTTAAGCTTGTG 59 NA Drosophila melanogaster 61 nullo FBgn0004143 FBtr0299565 1 1 1 71 X 6943723 6943741 CATCCAGAGACTCGTCCTC 59 6943776 6943794 TTGGAGCGCTTGTTTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 3 2 2 139 X 6586548 6586566 AGATCTATGGCGATGAGGG 58 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 CG15766 FBgn0029813 FBtr0070832 3 1 1 69 X 5709298 5709316 GTATCCGTCGACTGTACCA 58 5709247 5709265 TGTTGATGAGCTGGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5062 FBgn0029747 FBtr0070759 3 1 1 93 X 5075544 5075627 AACGATTGCAGGTACTACAC 58 5075470 5075488 CATTTGGCCTCGGATATCG 58 NA Drosophila melanogaster 61 CG2871 FBgn0029725 FBtr0070734 2 1 1 60 X 4670376 4670394 GGGAGGAACTTGAGATTGG 57 4670334 4670353 TCGTCATACCACTCGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 3 2 2 82 X 4551097 4551186 CAAGCTGAATACCGAATTGAG 57 4551229 4551248 AAGAATCATCCTCCGAATCG 57 NA Drosophila melanogaster 61 Muc4B FBgn0052774 FBtr0070662 1 1 1 171 X 4139681 4139797 GCCGTCACTTTGTTTAACTG 58 4139529 4139550 GGATTCTGTAGTATTTGATGCC 57 NA Drosophila melanogaster 61 CG6133 FBgn0026079 FBtr0070669 2 1 1 79 X 4005703 4005722 GACTCACGAACTGAAGAAGG 58 4005585 4005605 GGTCCACGTACTTAAGTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6133 FBgn0026079 FBtr0070669 1 1 1 78 X 4005703 4005721 ACTCACGAACTGAAGAAGG 57 4005585 4005605 GGTCCACGTACTTAAGTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 2 2 2 145 X 2146890 2146963 GAAGTCCGCAACATGATCC 59 2146763 2146781 TCCCTGATGGACTGAATGC 59 NA Drosophila melanogaster 61 CG34320 FBgn0085349 FBtr0112522 3 1 1 94 X 1057966 1057984 TTGGACAGCTACGATGGTG 59 1057786 1057908 CAAGAAGGCATTTGCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG11664 FBgn0040341 FBtr0070163 2 1 1 60 X 769955 769976 TTAAGAAGAATACCAAGCCGGA 59 769997 770015 CAGGCTATCCACCTGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Appl FBgn0000108 FBtr0070109 3 1 1 80 X 454740 454759 CCTTAGCAAGAAGACAACCG 59 454802 464905 TTGGGATAGGCCTTCTTGC 59 NA Drosophila melanogaster 61 CG17636 FBgn0025837 FBtr0112921 1 1 1 103 X 21785 21889 AGTTACAATGTTCGATGGGA 57 21701 21719 ATAAAGGTTAACACGGCCC 57 NA Drosophila melanogaster 61 CR40679 FBgn0085766 FBtr0114216 1 1 1 60 U 9999669 9999687 CTGCATCTCACATTTGCCA 58 9999709 9999729 ACCGTAAAGAAGACAGTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40728 FBgn0085769 FBtr0114219 1 1 1 60 U 9902227 9902247 ATTATTTACGTGAGGTCTCCG 57 9902187 9902205 AATCATCCAGTAACACGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40573 FBgn0085748 FBtr0114198 2 1 1 60 U 9529457 9529477 CCTCTCATATTGTTCACAACG 57 9529497 9529517 AGTTGACTCATGATAAGTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42444 FBgn0259875 FBtr0300172 1 1 1 220 U 9818915 9818933 TACACAGCCAAATTCGAGC 58 9819114 9819135 GAGGATTCGATATTCTTTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091631,FBtr0091632 2 3 3 80 4 1252147 1252167 AACACATGATAGACCCAACTC 57 1252209 1252283 CTCCATCAGGTCTGTTTCC 57 NA Drosophila melanogaster 61 CstF-50 FBgn0039867 FBtr0085865 2 1 1 82 3R 27561718 27561736 CATCAACACCATTGCCGAG 59 27561600 27561677 AAGATAGGAGGTACTTTCCATTCC 59 NA Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 3 2 2 97 3R 27079871 27079889 AGGAGCCGAGTTACTTGTG 59 27079737 27079810 TCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 PH4alphaNE3 FBgn0051017 FBtr0085667 1 1 1 80 3R 26430058 26430135 CCCAACTAAAGAGACTAGCC 57 26430178 26430196 GATTGCCCAAGTACTCCTC 57 NA Drosophila melanogaster 61 CG9747 FBgn0039754 FBtr0085573 1 1 1 80 3R 26012203 26012222 GTGAGCAGCTTGAACTTCAC 59 26011995 26012162 CATGATCCGCTTATCGTATGG 58 NA Drosophila melanogaster 61 AdoR FBgn0039747 FBtr0085581 1 1 1 83 3R 25962844 25962862 CATTATCACTCCGGCTCTG 57 25962687 25962798 GTAACAATCTGACGGACCTG 58 NA Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085590,FBtr0085589 2 2 2 60 3R 25880945 25880965 AGATACGCTTTGCTGATTGTG 59 25880905 25880929 GACCAATATAATCGGATCTGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 2 2 2 81 3R 25828886 25828977 AGGACAACATTGTCATGGC 58 25829020 25829040 CGGTCGAAGTAAGATATGACG 58 NA Drosophila melanogaster 61 Tb FBgn0243586 FBtr0085036 2 1 1 71 3R 22482240 22482258 GGGCTATCAATATGCGTGG 58 22482354 22482372 TATAGCCGCCTACATCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4730 FBgn0039355 FBtr0084934 1 1 1 80 3R 21503181 21503260 GCTCGTAACAAACTACGCA 58 21503119 21503137 CTTTCGCATTTCCTCCAGG 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 1 4 4 80 3R 21448136 21448154 CGATCAATATTCAGCCGGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 1 1 1 60 3R 21104514 21104535 GCATCAGTTTAAATTGGAGGTG 58 21104413 21104495 CACTACCGTAGAATGCAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31128 FBgn0051128 FBtr0084638 1 1 1 81 3R 20295416 20295488 AGTACAACGTTACGGGTCC 59 20295533 20295551 TAGATTCCGGCCAATTGCT 59 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0111008,FBtr0084603 2 2 2 80 3R 20138564 20138582 GTGCTGAAGCAAATGACCT 58 20138624 20138712 GCCAGTAGAAGCATTGAATCC 59 NA Drosophila melanogaster 61 CG4393 FBgn0039075 FBtr0301085 2 1 1 80 3R 19204044 19204062 TCTTAGGACCACCGAATGG 58 19203862 19204000 GAGCCGAGGTATTGAACCT 59 NA Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267,FBtr0113268 2 2 2 60 3R 18555467 18555543 TGATGCTTGTATCCTTGCTG 58 18555563 18555584 GCAAAGCATACTGGATATACGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 3 2 2 81 3R 18113613 18113631 CGCGTAGAGGTCTTATCGT 59 18113676 18115213 CGATCATGAGATCTGGCGT 59 NA Drosophila melanogaster 61 CG4000 FBgn0038820 FBtr0083935 1 1 1 120 3R 16502087 16502172 AAATGCGATTCACGTTGTG 57 16501985 16502003 AGGGTAAATGTGAGCTCCA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5412 FBgn0038806 FBtr0083909 2 1 1 141 3R 16403301 16403379 AAAGAAGTTGACCTCCATCC 57 16403482 16403501 AATGATCTCATCCGTCTGTC 57 NA Nonspecific Drosophila melanogaster 61 CG7695 FBgn0038631 FBtr0083694 2 1 1 91 3R 14442876 14442894 GCAGATCTTCCAGGAGGAG 59 14442738 14442824 AAATAAATGAGTACGGCCTCTC 58 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0300246 3 1 6 112 3R 14079171 14081051 CAGTTTCCCAAAGAGTTCGA 58 14079078 14079096 GAGAACTCTTGCTCCTCGT 59 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 2 2 3 111 3R 13219464 13219545 TGAAGAAGATGGATCCTAGCG 59 13219301 13219322 TCGCAAAGGTAGAAATTGTGAG 59 NA Drosophila melanogaster 61 tara FBgn0040071 FBtr0083257 1 1 2 297 3R 12052154 12082511 AATCCAATGTGAATTCCGCG 59 12082769 12082789 TGACCATTGCTAATACTTGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3987 FBgn0038292 FBtr0083026 1 1 1 107 3R 10965775 10966069 CATTCAATGCTGAAACTGGG 57 10966136 10966157 AGGAGTATGTACCACTATTGTG 57 NA Drosophila melanogaster 61 CG14851 FBgn0038240 FBtr0082956 3 1 1 78 3R 10388386 10388404 CATTCGGATCAACACCACC 58 10388446 10388464 GTTCCTGTTGGTGTTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Bc FBgn0013279 FBtr0082638 2 1 1 200 3R 8336661 8336679 AGAGCTACGTGTTCAACGT 59 8336842 8336861 GCATCTTGGTCATGATAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17202 FBgn0038043 FBtr0082587 3 1 1 90 3R 8248585 8248665 CCTTTAAGCCCATTGACCC 58 8248718 8248737 CGTATGAAGAGCTTGGTCAG 58 NA Drosophila melanogaster 61 cwo FBgn0259938 FBtr0082246 1 1 1 104 3R 6215149 6222426 AAGTATGAGAGCGAAGCAG 57 6222494 6222512 ATATTCAGCATCGTCCTCG 57 NA Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0110952,FBtr0110953 2 2 3 126 3R 6050317 6050335 TCTGCATAGCCAGCTTCAG 59 6050149 6050227 TCATCAATGCGATGCTCCT 59 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207,FBtr0082064,FBtr0082065 2 4 4 80 3R 5350380 5350399 CGATGAGGAGGGATTTAGCA 59 5350437 5350518 GAATAGAAGCTGCCAGATTTATCC 59 NA Drosophila melanogaster 61 CG33189 FBgn0053189 FBtr0081940 1 1 1 60 3R 4606223 4606241 ACTCGTCCTTTGATGACAC 57 4606181 4606199 TATGTAGACGGGCACTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 2 3 3 111 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 CG9667 FBgn0037550 FBtr0081815 2 1 1 142 3R 3951657 3951737 GATACAGAATGCTGGCTTGG 59 3951534 3951552 ACATCTTGGGACCATAGCG 59 NA Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 1 2 2 80 3R 2482608 2482882 AGTTTCGGATAAGGGCTATGG 59 2482548 2482566 TTGCCCATCTTGAGATCGT 59 NA Drosophila melanogaster 61 CG31556 FBgn0051556 FBtr0078612 2 1 1 152 3R 2134651 2134950 TACGACACAAGTTGGAATTGC 59 2134519 2134538 ACCACTACAGAGTCATCGAC 59 NA Drosophila melanogaster 61 RpL13A FBgn0037351 FBtr0078705 2 1 1 152 3R 1450229 1450616 GTTTAACGAACAGGACCGT 58 1450730 1450750 TCTTGTTCCTGTAGAAGTGTC 57 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 3 3 3 80 3R 1092685 1092703 AGGCGATAAGATCAAGTGG 57 1092745 1092853 ACAGAGTCAATCTGATTGGTC 57 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148,FBtr0078565 1 2 2 80 3L 22995473 22995494 AAGTTCAATATCCCTATCGCTG 58 22995534 23000437 ATGGTGGTATCAACTTGTGC 58 NA Drosophila melanogaster 61 olf413 FBgn0037153 FBtr0301492 1 1 1 81 3L 22222202 22222220 GCATCAACATATTCGCGGT 59 22222264 22222376 TCCTCGGTTTGTCGTATCTG 59 NA Drosophila melanogaster 61 CG3947 FBgn0037019 FBtr0078278 3 1 1 81 3L 20771079 20771161 GTATCCTACTTTATAGCAGGTCG 58 20771020 20771038 ACACCAGCATGTTTGACAG 58 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 1 2 2 123 3L 20432553 20432638 AAGGAACCAAACCTGAAGC 58 20432448 20432466 TGATAGCCAAGTGGTTCGA 58 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917,FBtr0074916 1 2 2 80 3L 19914995 19915076 GAGAATGCAGAAACTCCACC 59 19914934 19914956 CTTCTCGTACAATATCAGTTCCG 59 NA Drosophila melanogaster 61 CG7484 FBgn0036745 FBtr0075184 2 1 1 177 3L 17647990 17648326 GATACCATCAAGCCTCAGTG 58 17648466 17648484 ATTTGATCTGCAGGTTGGG 58 NA Drosophila melanogaster 61 CG32177 FBgn0052177 FBtr0075210 1 1 1 254 3L 17647277 17647297 AATTGCGTATAGTGAAGCCAC 59 17642298 17642316 GGTCCCAACTGATCATCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7603 FBgn0036726 FBtr0075220 2 1 1 113 3L 17459229 17459311 GTTCTAGGATTTCTAGTGCGC 59 17459385 17459404 CTTGATGTCGTTGTACAGCT 58 NA Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 2 2 2 61 3L 17423153 17423229 TGAATCCAAGACGTCATGAC 58 17423111 17423129 TAGAGCATCCTCTCCAGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13025 FBgn0036660 FBtr0075346 3 1 1 81 3L 16771358 16771380 GAGGTGGAGTTTATATCTACGAC 58 16771238 16771319 ACAGGACTTAAGTTCACTTCG 58 NA Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 2 2 2 87 3L 16372427 16372445 CTGCACTACTTGGTCACCT 59 16372298 16372378 TGAGGCTATAGAATCCTCCCA 59 NA Drosophila melanogaster 61 CG15715 FBgn0036538 FBtr0075536 3 1 1 199 3L 15830017 15830365 CTTAATTAGCAAGCAATGGCAC 59 15829308 15829328 TCGAAGTGCTGTTTATACGTC 58 NA InUTR Drosophila melanogaster 61 CG34452 FBgn0085481 FBtr0299517 2 1 1 80 3L 15680214 15680235 AAAGACGTATAGTCCCAAAGAG 57 15680038 15680176 CCTTCTAGCATAAAGACCAGAC 58 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 1 2 2 85 3L 14858471 14858826 TCCTGACAGTTAAGGAGCT 57 14858875 14858893 GAACACATCACTCGACTCC 58 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0075775,FBtr0114573 3 3 3 80 3L 14060633 14060721 AAGAAACATTGCAATCTCCCG 59 14060760 14060781 TTCAGGTCCAGACTATGAATGG 59 NA Drosophila melanogaster 61 sens FBgn0002573 FBtr0075862 3 1 1 90 3L 13390159 13390413 ATACATACCGGCGAGAAGC 59 13390087 13390105 TGTGCTTCCTCATATGCGT 59 NA Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 1 1 1 60 3L 13003068 13003086 TACGGAGCAGGAATTGGTG 59 13002954 13003044 TAATGCCTCTTGGAGGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5718 FBgn0036222 FBtr0076069 2 1 1 60 3L 11916176 11916197 AACAGTTCAAGGACATCAAGAC 59 11916137 11916157 TCAACTAGGTTGGAGTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 1 3 3 80 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730957 11730976 TCAGTGTCACAAAGTTCGTG 58 NA Drosophila melanogaster 61 CG3437 FBgn0035998 FBtr0301032 2 1 1 80 3L 9449770 9449876 GTGATAAGGAGGAGTTTGTTGC 59 9449711 9449729 CAACAAGTAAGGAACCGGC 59 NA Drosophila melanogaster 61 CG4477 FBgn0035971 FBtr0076430 1 1 1 98 3L 9243955 9244044 GTATGTATAAAGGCGGTCCG 58 9244105 9244123 CGGATGGAACTCTTAGCCA 59 NA Drosophila melanogaster 61 CG6683 FBgn0035902 FBtr0076655 3 1 1 110 3L 8507732 8507809 AATTCAGAAGCTAGTGCCTG 58 8507641 8507659 CAGAAGACTCCAATCGGAG 57 NA Drosophila melanogaster 61 CG7083 FBgn0035877 FBtr0076604 3 1 1 61 3L 8334149 8334168 TATATTCGCAACGCGAACTG 59 8334254 8334273 CACGATCTCCAGATCTAGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7550 FBgn0035839 FBtr0076736 3 1 1 60 3L 8117345 8117363 TCGAGGATGATCGCTTCTC 59 8117303 8117321 AAGGGAATAGTGCTCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 1 2 4 80 3L 7928506 7928525 GAAACTGTCTACGGTACCGA 59 7926323 7926877 CAGTTGTTGGACGATGCTG 59 NA Drosophila melanogaster 61 CG8543 FBgn0035787 FBtr0076863 1 1 1 60 3L 7463057 7463075 CTACACTCCCAAGACCCTG 59 7463015 7463033 AGCGTAGAAGGACTTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5150 FBgn0035620 FBtr0077086 1 1 1 60 3L 5589654 5589672 CTTGGAGGAGATGACACAG 57 5589696 5589714 GAAGTATCCCTGCTCTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17030 FBgn0035584 FBtr0073374 3 1 1 60 3L 4980418 4980437 ACTGGACTACCCATTCAAGC 59 4980377 4980396 ATTCAGGTGGTACATCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33764 FBgn0053764 FBtr0091765 3 1 1 98 3L 4267160 4267245 GTTAGCAAAGTAAAGGTGCGT 59 4267082 4267100 TGTTAGGAATCTGCACGCA 59 NA Drosophila melanogaster 61 Ack FBgn0028484 FBtr0073211 2 1 1 136 3L 4111632 4111718 GCTCTCAAAGAATATTTGGCCA 59 4111815 4111833 ATCAATTTCAGCTCGTGCC 58 NA Drosophila melanogaster 61 CG18869 FBgn0042179 FBtr0073204 2 1 1 80 3L 4060516 4060534 GTTCCCAAGACTATGGGCT 59 4060575 4060653 GATCACTAAGTGAATCAGTGGC 59 NA Drosophila melanogaster 61 CG12029 FBgn0035454 FBtr0113134 3 1 1 106 3L 3646480 3646499 CAGTACGCATCTCAATTGGT 58 3646568 3646752 TTGGTGTGGAAGGACTGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32271 FBgn0052271 FBtr0073105 2 1 1 60 3L 3202673 3202691 AAAGTGTCCACCATTGAGC 58 3202631 3202649 AGACCTTGATCAGATCGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4d20 FBgn0035344 FBtr0072967 3 1 1 90 3L 2477114 2477198 CTATCGACCGCTGAGTCTG 59 2477042 2477060 ATTGTTGATGCTCGACTGC 58 NA Drosophila melanogaster 61 CG32298 FBgn0052298 FBtr0299807 2 1 1 67 3L 2390411 2390491 ATTCAAAGGACCTATCAACAGG 58 2390365 2390383 ATCGTGAACAGACCAGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 1 2 2 80 3L 1890386 1890407 GTTTGCTGTTTATGAAGTCGAC 58 1890446 1890632 CCACAATCATGCAAATAGCTG 58 NA Drosophila melanogaster 61 Oseg4 FBgn0035264 FBtr0072797 3 1 1 89 3L 1733799 1733868 CGTGGATTCCAAGTACACG 58 1733728 1733748 ATTAGAATCTCCTCCTGGGAC 58 NA Drosophila melanogaster 61 CG12105 FBgn0035241 FBtr0072824 3 1 1 60 3L 1613437 1613455 AAAGGAGCAAGCTGGAGAG 59 1613395 1613416 TTCTCTTTGCACCTTAGTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33356 FBgn0053356 FBtr0086348 1 1 1 73 2R 15652639 15652657 TACCACGCTGAATACATCG 57 15652584 15652602 TATTAAACGCGTACGAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33383 FBgn0053383 FBtr0086375 1 1 1 60 2R 15642633 15642651 ATACATCGGTTCTCGTCCG 59 15642591 15642609 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 PebII FBgn0011694 FBtr0072455 3 1 1 87 2R 21061698 21061719 GTTCAGTTTACAGCATGATTCG 58 21061577 21061598 AGTTGCTCGATAGAACAAAGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072435,FBtr0072434 3 3 3 84 2R 20662330 20662445 GCCTACTACAAACTGATTGACC 59 20662267 20662285 TAAGGCCCGACTTCTTGAG 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 3 2 2 83 2R 19701897 19701915 TCAAGGTGGTGATCTTTGC 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 CG5428 FBgn0034887 FBtr0114541 3 1 1 93 2R 19570149 19570227 GAGTTCAGGTTCGTTCGAC 58 19570283 19570302 TACTATCGGACCAGAGATCG 58 NA Drosophila melanogaster 61 CG13559 FBgn0034870 FBtr0072057 1 1 1 60 2R 19390961 19390982 ACCTCATCACTCATGATCTGTC 59 19391003 19391021 GGATCTTTGTGGTCGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32834 FBgn0052834 FBtr0071991 1 1 1 88 2R 18871032 18871050 GTTGGATTGCCGAGAACAC 59 18870864 18870981 GTACTGGGTACGGTAAGTGG 59 NA Drosophila melanogaster 61 CG17807 FBgn0034748 FBtr0071938 3 1 1 60 2R 18522829 18522849 TGGAACAGTCGATACCATCAG 59 18522789 18522809 GAAGCGAAGCTATTTAGTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17807 FBgn0034748 FBtr0071938 2 1 1 60 2R 18522864 18522883 TACGGCACCAATAATGTGGA 59 18522823 18522842 CACATGCTGATGGTATCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071940 1 1 2 80 2R 18499317 18499385 ATCATCATGACTGCCTCCAG 59 18499256 18499274 AAATTTGCGAACCAGCTCC 59 NA Drosophila melanogaster 61 gom FBgn0029084 FBtr0071766 2 1 1 92 2R 18028018 18028036 AAGAACAGCCGCTATAACC 57 18028092 18028159 TAGACAGAGGACACCTGAC 57 NA Drosophila melanogaster 61 CG30263 FBgn0050263 FBtr0273308 1 1 1 80 2R 17565290 17565309 TGAACATAGCTTAAAGCGGG 58 17565350 17565438 TGCTCCACTCTATAATCTCCG 58 NA Drosophila melanogaster 61 CG10795 FBgn0034626 FBtr0071609 1 1 1 150 2R 17271526 17271544 ATCGATCCCAAGACACAGC 59 17271329 17271412 GGTGATAGCCATTCGTCCA 59 NA Drosophila melanogaster 61 dgt3 FBgn0034569 FBtr0273414 2 1 1 84 2R 16880215 16880292 CAACTGGCAGAACTCAAGC 59 16880149 16880167 CGTTCTCAAACATGGGCTG 59 NA Drosophila melanogaster 61 Lrt FBgn0034540 FBtr0302284 2 1 1 82 2R 16534541 16544744 CCAAAGCTTAGTGCAATTCTC 57 16544788 16544806 CTGTCCTCTAGCAGATCCT 57 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 3 3 3 101 2R 16148164 16148183 GTTTGCCAAGAAACTGAAGC 58 16148245 16148325 GCTTCGTTGGATAACATTGTG 58 NA Drosophila melanogaster 61 CG13869 FBgn0034486 FBtr0086323 3 1 1 93 2R 16126768 16126786 TGCTTTAGAGGCCAATCTC 57 16126630 16126713 CGAAACGAACTTGATTACACC 58 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086538,FBtr0086539 1 2 4 181 2R 15338967 15338985 ATCGTTCACATCCAAGCTG 58 15335987 15336005 CTGTGTAATGACCCTTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34045 FBgn0054045 FBtr0302390 2 1 1 91 2R 15220258 15220276 ACTCCTGTCTGAAGAACGC 59 15220329 15222248 CGAGTTACGCCTAATTTCCAC 59 NA Drosophila melanogaster 61 CG15065 FBgn0040734 FBtr0086667 2 1 1 80 2R 14277481 14277501 CGTTGCCAACAATATGAAGTG 58 14277542 14277627 GGATTTAACGGAGAAGCCAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 MED9 FBgn0260401 FBtr0300664 3 1 1 94 2R 14055008 14055026 ATCTACGACATTGTGCGCT 59 14055216 14055288 AGTTCAAAGATCTTGTGGTTGC 59 NA Nonspecific Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 1 2 2 89 2R 13424076 13424210 GTGATGAAGATCTGCTGGG 58 13424261 13424281 TTGGGATATTGTCCACTACCA 58 NA Drosophila melanogaster 61 CG18467 FBgn0034218 FBtr0086918 2 1 1 80 2R 13329055 13329073 TCGGATGATGAGCTTCCAG 59 13329113 13329190 TCTTGATATCCCTCTGTAACCAG 59 NA Drosophila melanogaster 61 CG9646 FBgn0034184 FBtr0086974 3 1 1 90 2R 12937672 12937749 AAATTTGAGACTGAGGTGGAG 58 12937801 12937819 GATAAACCGTCTCCTCCCA 58 NA Drosophila melanogaster 61 CG34191 FBgn0085220 FBtr0112384 3 1 1 60 2R 12839926 12839944 ACTGCTGGTAATGTGTTCC 57 12839967 12839986 CTCGATCTCTGGGTATGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ef1beta FBgn0028737 FBtr0087041 1 1 1 80 2R 12755889 12756007 ATCAGCGGATATACTCCCAG 58 12756050 12756068 GTTCACATTGTCGGCAGAG 59 NA Drosophila melanogaster 61 CG7798 FBgn0034092 FBtr0087192 2 1 1 60 2R 12109859 12109878 TCCATCCAACGATCTGTGTC 59 12109818 12109836 ATACCGGATATCGTCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 1 1 1 60 2R 11879534 11879607 ATTACTCCGCTTTGGTAAGTG 58 11879494 11879513 ATGGTGAATGGTCTTCAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG8089 FBgn0033993 FBtr0087418 2 1 1 60 2R 11034363 11034383 CTCAGAACTATGGCTTCTCCT 59 11034323 11034343 CTTTCCCGTCTATGCTTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17385 FBgn0033934 FBtr0087517 3 1 1 66 2R 10298881 10298900 TAGAATTCGACGAGACGGTG 59 10298776 10298852 TTGCTTCTGAAGGTTCGGT 59 NA DesignRelaxed Drosophila melanogaster 61 Obp50d FBgn0050074 FBtr0087554 2 1 1 80 2R 10260705 10260778 CGGATGTAACTGCCTTGAG 58 10260821 10260840 AATACTGACTGCACTTGGAG 57 NA Drosophila melanogaster 61 CG8589 FBgn0033921 FBtr0087562 3 1 1 88 2R 10188555 10188633 TATGCTGTGGACCATCGAG 59 10188485 10188504 GATTCAATATCGCGAGCAGG 59 NA Drosophila melanogaster 61 CG13339 FBgn0033871 FBtr0087632 1 1 1 141 2R 9712655 9712728 CAAGAAAGTTGGACAATTGGG 58 9712831 9712849 TATGTTGAGGATGTCGGCA 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 1 2 2 60 2R 8574567 8575103 ATGTCGAGGATAATGAACCC 57 8575126 8575144 TCATCATCCAGGTCATCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG30056 FBgn0050056 FBtr0087823 3 1 1 73 2R 8449805 8449823 CAGCTCCTTCTAATGGCCT 59 8449860 8449878 ATCAGGATCTCGTCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 2 3 3 90 2R 8212092 8212180 TACTGTTGCTCCTATCGGG 58 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 jeb FBgn0086677 FBtr0088021 3 1 1 91 2R 7980407 8004116 GTGCCACAAATCGAGTGTC 59 7980334 7980352 TCTATGCAGCGGTATCTGC 59 NA Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 2 2 2 90 2R 7564735 7564753 TCTTTCCACGATCATCGTG 57 7564806 7564881 CAGAAGAATCTTTCTGCCCA 57 NA Drosophila melanogaster 61 CG7741 FBgn0033615 FBtr0088118 2 1 1 83 2R 7192517 7192536 TTCACCTACAAATCAACGCG 59 7192582 7192658 ATTCCTCCGCCTTATCCTC 58 NA Drosophila melanogaster 61 CG13227 FBgn0033589 FBtr0088107 2 1 1 60 2R 7122852 7122872 TTTGTTAGAGCCGATGAAACG 59 7122891 7122912 GCTGAATAGAGCTTGGTTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 2 2 2 131 2R 5473112 5473130 TGAAGAGAATACGCGACGA 58 5473284 5473302 CAATAACGTCGTAGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Or45a FBgn0033404 FBtr0088503 3 1 1 199 2R 5233820 5233838 GTATTGCTATGGAGGCGAG 57 5234001 5234073 TTCTGATGACCCAAAGCAG 57 NA Drosophila melanogaster 61 CG42615 FBgn0261267 FBtr0302222 2 1 1 60 2R 4625024 4625043 CCTGTCCAATCTGTATCCCA 58 4625066 4625084 CTGCCAGAGTAGGAATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0113050 3 1 2 146 2R 3677993 3678073 CAACTTGAGGGAATTATCCTACG 59 3678235 3678253 AAGTAGAGGAACATGGCGG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 2 5 5 80 2R 3371066 3371168 TGGACTTTATGTGGGATATCG 57 3371006 3371024 AAGTGCGATCTTTCTCGTC 58 NA Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 2 2 2 161 2R 3012687 3012927 CTGCGATGAGATCATCTTCTC 58 3013050 3013068 AACATTGTGTCGAAGCAGG 58 NA Drosophila melanogaster 61 CG9445 FBgn0040674 FBtr0086210 3 1 1 99 2R 2726235 2726253 GAAGCCTTCTCCCACTACG 59 2726154 2726172 AGGCTTCTATGGCCATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 1 2 2 77 2R 2555761 2555831 AATCCGACCCTGTCATCTG 59 2555871 2555890 ATAAAGTACTGGTGGAAGCG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 l(2)09851 FBgn0022288 FBtr0086043 2 1 1 60 2R 1642398 1642418 CGATGACGGCTTATATTGTGG 59 1642439 1642458 ATAAGGTTGTTGACATGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33891 FBgn0053891 FBtr0091895 1 1 1 60 2L 21479186 21479204 CGTAATTCGTGATGCCGTG 59 21479144 21479163 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33818 FBgn0053818 FBtr0091822 1 1 1 60 2L 21459728 21459747 CGCTCAAGACTTTAAGACGG 59 21459770 21459788 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33816 FBgn0053816 FBtr0091820 1 1 1 60 2L 21456328 21456347 AGTTGAGAAGAAAGTGGTCC 57 21456370 21456388 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33803 FBgn0053803 FBtr0091807 1 1 1 60 2L 21420410 21420428 CGCTCAGGACTTTAAGACG 58 21420452 21420470 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 2 3 3 84 2L 21172325 21172343 GTATCCACGAGACCAACCT 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 CG13081 FBgn0032804 FBtr0081252 1 1 1 84 2L 19541155 19541173 GATTCCTGAGCTAGCCCAG 59 19541221 19541301 TTGAGTTGGAGATCGGCTG 59 NA Drosophila melanogaster 61 CG31816 FBgn0051816 FBtr0080868 1 1 1 84 2L 16542726 16542744 TAATCTTACCACCGAAGCG 57 16543001 16543019 CAAGTGCGACATCGATACC 59 NA DesignNoJunction Drosophila melanogaster 61 pkaap FBgn0040079 FBtr0080826 3 1 1 83 2L 16290137 16290158 TTTCGCTGACTTTCTAAAGTCG 59 16290199 16290289 GGATGAGTGGTGGAATTATCTC 58 NA Drosophila melanogaster 61 Drep-4 FBgn0028406 FBtr0080478 1 1 1 106 2L 13285774 13285792 TTCTGATGGCTTCGAGGTG 59 13285632 13285707 AATCGGCATCTGTTGTAATGAC 59 NA Drosophila melanogaster 61 CG16978 FBgn0040972 FBtr0080495 1 1 1 110 2L 13144458 13144477 TGAGCGACATATTTGCAGAC 58 13143759 13143777 GTTGGGCGGTACTAGAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0089908 3 1 2 83 2L 12713577 12713658 CCCAACTACGTTTCTTCGC 59 12713512 12713530 CACATAGCCATACTTGCGG 58 NA Drosophila melanogaster 61 Ced-12 FBgn0032409 FBtr0080330 3 1 1 100 2L 12099280 12099298 GCAATGTCAACTTCTCGCA 59 12099362 12099440 CAACGCTAATATACCCGGC 58 NA Drosophila melanogaster 61 CG14946 FBgn0032405 FBtr0302029 2 1 1 84 2L 12063984 12064002 CCACCAAATTCGCTGTACG 59 12063860 12063937 GTGGTTCGAATCAGATCCCT 59 NA Drosophila melanogaster 61 CG14069 FBgn0032315 FBtr0080175 3 1 1 66 2L 10910479 10910497 GTTCATCCCACTGATCCTG 57 10910431 10910449 CAGTGCTATTTGAGCCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6508 FBgn0032303 FBtr0080139 1 1 1 60 2L 10819385 10819403 ATCTTCAGTTCGACACTGG 57 10819425 10819445 GTGCTTGAACACTTTACACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6094 FBgn0032261 FBtr0080091 1 1 1 87 2L 10507327 10507345 GACTGCAAATCTACACGCC 59 10507459 10507477 TAGGTGATCTCCAGTCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 3 2 2 80 2L 10225140 10225287 CTATTCCAGCATGTTCGGG 58 10225078 10225096 GCTTTCGCTACCAGTTCAC 59 NA Drosophila melanogaster 61 Bace FBgn0032049 FBtr0079701 2 1 1 60 2L 8495414 8495436 CTCCCTACAATGCTTACATTACC 59 8495376 8495394 AGATAGCCATCCTCACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 2 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Snx6 FBgn0032005 FBtr0079631 3 1 1 81 2L 8219287 8219370 AGGATCAAGAATCTGGAAACC 57 8219226 8219244 TATCCCGCTGATAGTAGCG 58 NA Drosophila melanogaster 61 Ent2 FBgn0026585 FBtr0079290 3 1 1 60 2L 6563504 6563525 AAGAAATCTGATTCTAAGGCCC 58 6563544 6563564 CTGCTTTCTTGAAGATCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 1 4 4 110 2L 5984934 5985037 CATTCATAGAATTGGTCGCGG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079010 3 1 2 65 2L 5055525 5055633 CATTGGAGCCCTACAGGAG 59 5055662 5055680 CACAGATTGGTGTCCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 betaggt-II FBgn0028970 FBtr0077631 3 1 1 61 2L 2880263 2880281 AGTTCATACTGTCGTGCCA 59 2880306 2880324 CATGTTGCCAGTTCTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718 3 1 2 192 2L 2770150 2770168 GATGTTCTTGTCAACCGGC 59 2770390 2770468 GGCAACGCATTTATCATCCT 59 NA InUTR Drosophila melanogaster 61 GluRIIC FBgn0046113 FBtr0273244 3 1 1 81 2L 915740 915822 TCATGAAAGGGACTTCCGG 59 915867 915885 GTTATCCGCTGTCCATCCT 59 NA Drosophila melanogaster 61 dbe FBgn0020305 FBtr0078030 3 1 1 60 2L 869441 869459 CAGAAGTGTTCCCTTCGAG 57 869399 869417 GATGTCACACCCAATGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0078012 1 2 3 64 2L 821612 821630 ATGAACCTCAACGACGAGG 59 821658 822874 CTGTAAGCAACCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3876 FBgn0031284 FBtr0078039 2 1 1 81 2L 818754 818772 TGAATGTGATCGCCTTTGG 58 818631 818711 AAGAAAGTATAGACTCCCGCC 59 NA Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083 2 1 2 117 2L 478200 479420 ACAAGTTGGAAATCGTCGC 59 478101 478123 GGATTTGGTGTAATAATCCCTCC 59 NA Drosophila melanogaster 61 CG11617 FBgn0031232 FBtr0078146 2 1 1 103 2L 205203 205280 TATGACCAGGCAGAAAGCT 58 205118 205136 TATGATGAAGCATCCAGCG 57 NA Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 2 2 2 68 2L 8088 8109 GTCAAGAAAGTCAGTGAAACCA 59 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0301888 3 1 5 134 2L 155416 155501 GCCAACAATTTAAGAGACTGCT 59 155596 155614 TCAGATCGGTTAAGGGCAG 59 NA InUTR Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 3 3 3 87 2L 862622 862640 AAGATTGTGCTGGTCACCT 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 2 2 3 81 2L 1179187 1179460 CAACAAACAGGTGCCTCAC 59 1179504 1179523 GGGTTAACTCCATCCAACGA 59 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0077702 1 1 2 80 2L 2671787 2671866 CAACAAAGCTATAATCTAGGCCG 59 2671904 2671924 ATTGTATAGTTTGCTGCCCTG 58 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 1 4 4 80 2L 2738720 2738740 CAACAACTGGTACAAATTGCG 59 2738780 2738885 ACCGTCGAGAAGATGATATGG 59 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 2 4 4 81 2L 2738607 2738692 TATTGAGATATCCCGCCGA 57 2738737 2738755 GCAAGGTAATAGGTTCGCA 57 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 3 7 7 80 2L 2963120 2963232 GCAATCTGTTAAGGTGATTCG 57 2963273 2963292 TCTTCGTAATTCGTCATGGT 57 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 1 7 7 80 2L 2963125 2963239 CTGTTAAGGTGATTCGTGATCTG 59 2963278 2963297 CAGCCTCTTCGTAATTCGTC 58 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0290241 2 1 2 126 2L 2971048 2971128 AAAGTAAACCAGCTCGAGG 57 2970940 2970958 TTTAATACGGCAGCTCCAC 57 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 1 2 2 116 2L 2975184 2975204 GTTAATGAAGACACATGCTCC 57 2975017 2975036 CCGTTGTCATGTCATTTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 2 1 1 89 2L 3468950 3468968 GGACGGACAGTTCTTTGAG 58 3468827 3468845 CACAGGATGAGCTGTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 3 4 9 80 2L 3887037 3887055 TTTCGTCTCGATTCACAGC 58 3884510 3886995 CTGTGACTCCTGATTCATTGG 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 2 5 6 82 2L 4192684 4192705 GAACCTTAAAGACAACAACCAC 58 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 1 4 11 86 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 2 6 6 60 2L 5047161 5047179 CAGACGTTAAGCGACATGG 59 5047198 5047287 CTTCGTTATAGATAGCTGCATTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0100270 2 4 6 60 2L 5044640 5044660 CTCCTACAGCCACAAATATCC 58 5044681 5045832 GATGTCGTCAGCTTTCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026,FBtr0111024 3 2 2 107 2L 5077706 5077785 CAACTTCCGATGGTACCGA 59 5077617 5077635 TCGATGGAGAACAGACCAC 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 3 4 4 99 2L 5719427 5719526 AAATGGTGGTATCACGTTGG 58 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 3 1 2 106 2L 5765982 5766000 ATCAGTGCTCTATTGTGCG 58 5763302 5763320 TAAGAGTCGCACTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 2 2 2 84 2L 5993529 5993547 CATCGATCGCCTTAATGCT 58 5993337 5993483 AGTTCGCACCTTATTGATACC 58 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 2 2 2 183 2L 6008499 6008769 CTGTGCATGCAACAGATCC 59 6008334 6008353 CGATCAGTAGTGCATACAGC 58 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 3 3 3 116 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044243 6044262 TTATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335 3 1 2 69 2L 6535870 6535889 AATGCCATACAACTACGCTG 58 6532944 6535838 ACGTTTAACCTTTGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 1 1 1 88 2L 6745191 6745215 GAGGCCATTATCAATGAATATGAGG 59 6745072 6745092 TGATTGATTTCCAACAGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 1 5 5 131 2L 6924280 6924300 GGTTATCATGTACGACCAGGA 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079444 1 1 2 80 2L 7427293 7427311 GACGGGAAATGTGGTTGTG 59 7427353 7428058 TTAAGTTTCGACCTGATGCTC 58 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300332 1 3 4 150 2L 8175383 8176576 AATCAGCGCTTGAGTTTGG 59 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 1 2 2 80 2L 8367179 8367198 CCTCACCGAGACCATATACG 59 8367238 8367321 CCAACGAGACTAGTAAAGTTGC 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 1 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 2 2 3 130 2L 8482614 8482632 GGGACTATTACCGCGATCC 59 8482725 8483143 GGATGAAGATGCATGGATCG 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079818 3 1 2 172 2L 9252774 9252792 TCTGAAGATGCCCGAAGTG 59 9252336 9252639 CCTCTGTAAGGTAGCCTTCG 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817,FBtr0079818 2 2 2 106 2L 9251867 9251950 GGCTCAAGTAATGCCAGAC 58 9251779 9251797 GATTTGACTCCACCTCGTC 58 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 3 2 2 107 2L 10241770 10241853 CGGTCATTTGGGTATTGCT 58 10241924 10241942 ATGACCTTCGGAATAGGCT 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 7 7 84 2L 10259083 10259102 TGTTGATATGTGGCTCAAGG 58 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 3 1 1 61 2L 10860878 10860896 CCTATCAGAACGGACATGC 58 10860987 10861005 AGTGGGTTGAGTCAAATGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 3 3 5 82 2L 10990776 10991069 AACATACTCTCGGAACGCC 59 10991114 10991133 CCACGGTTGTAGAAGTACGA 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 3 3 5 82 2L 10990776 10991069 AACATACTCTCGGAACGCC 59 10991114 10991133 CCACGGTTGTAGAAGTACGA 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091682,FBtr0091679,FBtr0091683 1 3 5 70 2L 11278443 11278461 ATCTAACCATGCAGCTGCA 59 11278584 11278602 CATGTCGATCTCCTCGTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 3 1 1 78 2L 11935187 11935207 AACTCATCGAAGGTATCCAGG 59 11935320 11935340 TGGCTAAGATGTAAAGTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 3 2 2 80 2L 12056423 12056508 TGTCAGACAAATATGCGGTG 58 12056551 12056569 GCAGAATTCTCCTCTTGCG 59 NA Nonspecific Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 1 1 1 84 2L 12427507 12427525 AACTACTCCCTGAACAGCA 58 12427360 12427378 CCTGAACGTTCTGCAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 2 1 8 95 2L 12477159 12482571 TTTCTGCCAGATGCATCTG 58 12458191 12458209 CACCGCTATCATGAGATGC 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 1 2 17 102 2L 12728786 12737964 GCAATTGTTTGCGGTTCTG 58 12738030 12738048 CTGGGCGAAGTAGTACAGG 59 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440 3 1 4 163 2L 13208446 13208467 AGTGGACACATATCATTTGGTC 58 13208767 13209501 CTGCCGAATCTTCTTTCTCG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 2 3 9 88 2L 13274369 13276259 CTTTGGTGGTAATGGAGTCTC 58 13276395 13276413 TTGGAGGCACATATTGCTG 58 NA Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 3 2 2 169 2L 13308294 13308423 TTTACCTATGCCAGTGGCA 59 13308143 13308161 GGTCAGGTAGATCCACCAC 59 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 2 5 5 80 2L 14195780 14195800 AATGTCATACACATGCTCGAC 58 14189221 14195741 GTACAGGTTCAAGCTCATTAGC 59 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 1 2 2 80 2L 14364281 14364381 GACTTTAAGAAAGAGGAGTGCA 58 14364420 14364440 CACAGAGCGAATATAAGTGCT 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 1 4 4 80 2L 15266639 15266657 ATCGTAAGCACGAGATCGA 58 15266508 15266598 CTGATACTAGCAAGTTGTGAGC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 2 4 5 81 2L 15760338 15760416 CGATCCGGATTACAGAACCT 59 15760276 15760295 TGGATAGTTGGCTCCATAGC 59 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791 3 1 2 174 2L 15895803 15895878 ATTAACCTGGACCACTGTG 57 15896016 15896034 TTCATACAGGATATGCCGC 57 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080822 1 1 2 80 2L 16238937 16239214 AAAGGCGGTTATGGAATACAC 58 16239255 16239274 TTCGAAGCTGAAGACTTTCC 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 3 14 16 83 2L 16774783 16774801 GAGACTCTGGATACCCAGC 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 2 4 4 85 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825419 CAATTATTTCCATGGCTAGACCC 59 NA Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 2 2 2 134 2L 16843617 16843635 TACACCGATCGGGTAATGC 59 16843383 16843522 CATAATGGCATACTGAATGCCA 59 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 3 2 2 177 2L 16986138 16990246 ATGATTGTTGTGGTGACCC 58 16990387 16990405 GTTCATAAGGTCGCAGCAG 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 3 4 12 114 2L 17717920 17717941 ATAGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 2 2 5 187 2L 18387305 18388389 CCACAAACGAAACTCAAATCG 58 18388538 18388556 GTGATGGCGTCTTTCAACC 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120 3 1 2 129 2L 18838789 18838894 ACGAGAAGACAGAAGAGCG 59 18838678 18838696 TTGTCCCGATCCCTATCCT 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 3 4 4 109 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856750 18856771 AACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 2 2 3 95 2L 18965176 18965269 ATGAATGCGAGATTGCACG 59 18965099 18965120 CTGACAATAGTGCAATCGAGAG 59 NA Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081170 2 1 2 145 2L 19081985 19082930 GTTCTTGCTATCCACAATCCC 59 19081860 19081878 CGAAGCACTTGTCGTTCAG 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 1 2 6 80 2L 19419920 19419938 TACGGAAAGATCGATCCGG 59 19410633 19419879 TAATAGAGCATATCCTGGCAGG 59 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 2 2 2 61 2L 19418373 19418391 TCGGCTACGACAAGTACAC 59 19418477 19418496 GTCAACGGTCAAGTTGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 1 5 5 82 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 3 2 2 89 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729654 20729884 TTCGTCGTTATCCAGTTCCT 58 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 3 2 2 236 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813641 20813659 GATTTACGTACTGCCGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 2 3 4 83 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257177 TGTAAGCTTGCAAGCTCTG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0085925 3 1 2 84 2L 21578670 21578758 GCGGCAAAGTTTACTATCAG 57 21578605 21578623 TCTGAGTATGGACTACGCT 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959 1 1 4 87 2L 21720474 21725078 ATCTCCAGTTGCTATGGCC 59 21725129 21725147 TCAATGCCGAACTTAAGCG 58 NA Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 2 3 3 106 2L 22428776 22428854 GGATCCAGGTTGGATTGAC 57 22428688 22428706 GCATCCTGCATATAGGGAG 57 NA Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 2 2 2 80 2L 9789412 9789431 CCTCTACTGACAGATGACCA 58 9789291 9789371 AACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 3 2 2 80 2L 16840568 16841352 ACCTAAGCCAGATGACGTC 59 16841395 16841414 GGTTACCCATCAAAGTGCTC 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 2 5 5 80 2R 19472 19550 GTAATCACTTCAGTTGAGGTGG 59 19586 19609 GTCTAAATCAAGGAGATCGTACTG 58 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 3 5 5 80 2R 19469 19547 TGTGTAATCACTTCAGTTGAGG 58 19585 19606 TAAATCAAGGAGATCGTACTGC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0091528 1 1 2 80 2R 1131096 1133465 AATTCTGAAGGCATGGTGG 58 1131034 1131054 ACATAAGTCGGTGACAATGAC 58 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 3 3 3 80 2R 1195092 1195110 ATCCGAATTCAACAGGCAG 58 1195154 1203788 CCAACTCGAGTAAACCGAC 58 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 2 4 4 89 2R 1595873 1596126 CGCTAACATAGATCTCAACACTG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 1 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662530 TTATATCTTGGGCTGGATACGA 58 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 1 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662530 TTATATCTTGGGCTGGATACGA 58 NA Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 1 2 2 83 2R 3039479 3039497 CATTAACGCAGTGGAGCAC 59 3039348 3039435 CCTTTAAGCAATCCAGTTTCCA 59 NA Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 2 2 2 84 2R 3039481 3039499 TTCATTAACGCAGTGGAGC 58 3039349 3039436 CTTTAAGCAATCCAGTTTCCAG 58 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 2 1 1 78 2R 3167616 3167634 CTGCTCTCGAGCATAAAGG 58 3167739 3167757 TCACTGGACTCTGAAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111085 1 1 59 80 2R 3237932 3237950 CTATATTCGCCCAGTGGGT 59 3236472 3237889 TTGTACCATCTCATAGCGGG 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 3 5 8 109 2R 3355323 3356624 CACTATGCCGTTGATGTGC 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 1 4 4 83 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 2 2 2 80 2R 3942532 3943248 CCTATCAAACAGGAGCCCA 59 3942470 3942488 TTCTGTATCGCTGCTTGGA 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 3 9 9 80 2R 4568219 4568302 CATGGACTACCGTGATATGAC 58 4568343 4568362 TCTTCCCAGTTGACTAGACG 58 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658 1 1 3 84 2R 4842283 4842301 ATATGTGAAACGGACGGCT 59 4842349 4842474 TGTGCAGACATCTGTAGCT 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 1 5 5 80 2R 5066161 5066179 GGTTGGTTTGAGACATCCG 58 5066038 5066123 GTTGATGAGTATCTTATTCACGAGG 59 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122,FBtr0112672,FBtr0112673 3 3 4 81 2R 5463886 5465706 GCGAGCAAATAAATCAGTTCG 58 5463825 5463843 TTGATCACGGAGAACAGGT 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 1 3 5 83 2R 5884116 5885216 GCTAGCATTCCTCGATGTC 58 5884051 5884069 TCGTAGTCGTCAATGTTGC 58 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993534 5993553 TCTGGCCCTTAACTTCTCAG 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 3 2 3 83 2R 6343083 6343102 GTCCTTATTCGGAAGTACCG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0300578 3 1 2 118 2R 6604805 6604823 AAATGGAGGATCCCGACAC 59 6604904 6607314 AATATTCCGCCTCTGAGTCG 59 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088103 3 1 3 80 2R 7107153 7107172 AAATTAAAGTCCGTCACCGT 57 7107215 7107984 AGCTTTGAATACCTCGCTG 57 NA InUTR Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 1 2 2 178 2R 7263254 7263272 ACCCGATGTGATTACCCTG 59 7263414 7263754 GATAGCTGTCCGATTTGCC 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 3 4 4 105 2R 7269386 7269467 CCGATAAGGTTGATCACGG 58 7269299 7269317 TCCGTGTATGTAACGTCGA 58 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074 3 1 2 151 2R 7559787 7560223 TTTGTACCTTCTCCCAGGT 57 7560338 7560558 CCAAGAACCAGCATCTTGG 58 NA Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 2 2 2 115 2R 8186726 8186746 TCTACTATATGGCTGGATGGA 57 8186569 8186649 CAGTCCGAATTTACTGCCA 57 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917 2 2 3 165 2R 8274925 8275428 TAATAATGGCCGGAGTGGT 58 8275913 8275935 GACATAGGGAATATTCGAACCAG 58 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936 3 1 2 160 2R 8373443 8373463 TGTTTCCTTAACTCAGAGGTG 57 8373804 8374099 GATGTCAGTCGTAGACTTTCG 58 NA Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 1 2 2 139 2R 8763437 8763613 TATTGATGTGCCAATTGCTG 57 8763255 8763274 CATACAGATCATGGTCACGA 57 NA Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 2 1 1 112 2R 8816813 8816831 GCGATTTCGTATGCAACTG 57 8817349 8817367 GTAGAGTCCGTCTGTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 AQP FBgn0033807 FBtr0087766 1 1 2 135 2R 9100462 9100540 CTAGTCGTGGCAGTTTACG 58 9100345 9100363 CAATGATGTGCTCCAGGTG 58 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 1 3 5 81 2R 9846756 9846774 CAGCAGCAATGTGAACTCG 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087593 1 1 3 150 2R 9848759 9849731 AGGGCACAATTGATTCCAG 58 9854263 9854281 GATAGTTCTTGCGGTGCTC 58 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087593 3 1 3 151 2R 9848758 9849730 GAGGGCACAATTGATTCCA 58 9854263 9854281 GATAGTTCTTGCGGTGCTC 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 2 2 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179876 10181607 TCTGCAGAATATAGACCTCCT 57 NA Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 3 1 1 73 2R 10319438 10319456 GACCCAATATCGTTCAGCT 57 10316220 10316239 AAAGCAGAGGAATTTGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 3 3 4 86 2R 10661508 10662487 CAATTCCACGTCAAGGGTC 58 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 2 3 4 99 2R 10756534 10757571 GAATATTACATCAGCCAGGTGG 59 10756456 10756474 ACAATTGGACGTAGCTGCT 59 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 3 3 3 81 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204763 11204782 CTCGTATTCCTGAGTTTGCC 58 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 2 5 5 80 2R 11211582 11211605 GATAATTAACGATAGGGAGATGCG 59 11211644 11211716 GGTTTCATTGCATCAGGCA 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 1 5 5 80 2R 11211645 11211717 GCCTGATGCAATGAAACCC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 3 1 1 101 2R 11461004 11461022 GGAACCTACGCTTCATGTG 58 11460863 11460881 TTGTGGAGCAAATTACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 1 3 3 80 2R 11812822 11812840 ACTCTGCCGTTAGTAGCTC 58 11812698 11812781 AAAGATGTTCTGTATCCTGCTG 58 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 2 2 5 130 2R 11825287 11825305 AACTACGTGAGCTCTCGTC 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 3 2 5 131 2R 11825287 11825306 TAACTACGTGAGCTCTCGTC 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 3 8 13 91 2R 11835572 11835590 CATCCGCTGCTAACAAACC 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 2 3 3 82 2R 11881891 11881974 TTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 3 3 3 83 2R 11881891 11881975 ATTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 2 2 2 117 2R 11997163 11997183 CTGCGGGTCTATAAGATTGTC 58 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 2 2 2 138 2R 12083326 12083344 ACAATGCGCTACTTTCCAC 58 12083147 12083225 ACCTGTACATCGTGACATCC 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 2 3 5 81 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443119 ATTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 1 3 4 80 2R 12645897 12646764 AAGTTACGGCAACGTTTGG 59 12645835 12645855 ATTATAGTCCGGTGAAGTGGG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0112819 3 1 3 108 2R 12824023 12827603 CTCAAGTGTCGAGCATGTG 59 12827674 12827693 TCTCCAGATAAATGCGACCC 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0086949 3 1 8 89 2R 13409395 13411597 ATCTAACCGATTCGGGACTG 59 13408422 13409344 AGAGTTTAGGACCTGAAGCG 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300540 3 1 7 196 2R 13727107 13727126 AGGATCACATACTGGACCAG 58 13727284 13728261 GCAGTAATCCGCATTTAGCA 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 1 2 4 80 2R 14018837 14018856 TGAGTTGGAAACACTGAAGG 58 14018540 14018795 TCGTTAAACAGACCCATGAG 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 3 3 6 81 2R 14169393 14169478 CAGCAACAGATGATAGCCA 57 14169330 14169348 GATTTGAGTTGGGCTCCTG 58 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 2 1 2 248 2R 14419950 14419973 CGGTAGATGTAGGTAGAGTATCTG 59 14420378 14420396 CAGAGGAATGATGGTTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 1 2 4 104 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528689 14528973 AATCTTGTATCAGCACCCAG 57 NA Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 1 2 3 185 2R 14664324 14664411 CTTACACCAACAGACATGTCG 59 14664159 14664177 GAAGACATGCAGCTTGTGG 59 NA InUTR Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 1 5 5 80 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844990 14845239 CTAAGACTCTTGTACCTGATGTG 58 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 3 3 3 81 2R 15010463 15010484 GAATAAACGCTACAACAAACCC 58 15010304 15010422 ATAAGCAGGTTGCATATGCA 58 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 2 3 3 81 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010726 15010809 TTGGCCACTAATTCAAAGTACG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086508,FBtr0086509 3 2 4 103 2R 15129200 15129218 CAAGAACATCGATGGCGTG 59 15129285 15129691 GTGTAGCATCAGCCTTGTG 58 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0114605 3 1 6 124 2R 15319889 15320110 GGGAAATCAGGGCATTCAC 58 15319721 15319741 ATCCTTGAGGTATTGAGCAGG 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 3 2 6 122 2R 15461674 15461693 GACATTTATGCCGGATGCTG 59 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 2 2 2 80 2R 16764063 16764082 TAATTTATGGCGATCACGCG 59 16764123 16764776 TAAGCACCATAATTTCACCGG 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 3 2 6 127 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286078 17286689 TGTATGAGCTGTGTTTATGCC 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273206 1 1 6 125 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286077 17286691 GTGTATGAGTGTTTATGCCGG 59 NA Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 3 2 2 278 2R 17556965 17557042 CGAACAAATAATGTCCATACCG 58 17556708 17556726 TTCCATGCCTTAGCTTAGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928,FBtr0300929 3 2 2 99 2R 18001246 18001264 TGTTTGGAAACTTGGAGGC 58 18001377 18001396 GTGTTTAGAGTGCCATTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 2 2 2 70 2R 18543961 18544131 TTACCATGTGCTGCTTTGC 59 18543909 18543927 CTTGCAATCGTTGGTGGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 3 2 2 83 2R 18782169 18782187 TTGTCTGCTGTCCCATACC 59 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 3 3 4 103 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958207 18958225 CTCAACTTGGGTCTTGGTG 58 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 1 2 3 102 2R 19279421 19280899 CAAGGAGACCTGGATCCTG 59 19279337 19279355 GGAGAGGAAGGTCTTGCAG 59 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 2 2 3 103 2R 19279422 19280900 ACAAGGAGACCTGGATCCT 59 19279337 19279355 GGAGAGGAAGGTCTTGCAG 59 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0072024 1 1 2 141 2R 19310070 19310159 TATAATCATCACCGCCATGGA 59 19309786 19309967 CAGCAGCGTATCATTCAGC 59 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0072024 3 1 2 142 2R 19310070 19310160 ATATAATCATCACCGCCATGGA 59 19309786 19309967 CAGCAGCGTATCATTCAGC 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 12 13 80 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566006 19566082 ATGTCGATGAAGCTCTCCC 59 NA Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 1 3 3 60 2R 19587831 19587850 AAGGCGGAGCTCTTTAAGAG 59 19587733 19587755 CGTAGAATGATATGATGGACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 1 6 6 80 2R 20287859 20287947 AGAAGTCCTTAGTCAAAGATCC 57 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 3 2 3 81 2R 20484167 20484189 TCTCTGGCCTATATGTGAATGAG 59 20484230 20484301 TCGTCCAGAGTCTTCTCCT 59 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 3 3 3 86 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865154 20865232 ATGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 3 4 4 126 3L 177071 177155 CCTCACTGAGACCATCGAG 59 176963 176981 GTAAAGCTCGTTGTGCCAC 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486 2 1 3 139 3L 212773 212851 CCATAGCCAAGTAATGTCGG 58 212950 212971 CATTAGACTCCATTTCCCTCTG 58 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0100851 3 1 6 81 3L 216698 216770 TTTCCTGCTTCTAGGCTCC 59 216812 216833 TCACCATATCACTACTCCAGAC 58 NA InUTR Drosophila melanogaster 61 mth FBgn0023000 FBtr0301819,FBtr0072570,FBtr0301820 1 3 4 86 3L 344032 344117 TTGCAGGAGAGCATTAGGG 59 343964 343982 GACATTTCGTGTCGTCGTG 59 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 2 3 3 114 3L 679819 679906 AGAATTTAGCGACCTGGCA 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 1 1 1 78 3L 1206374 1206392 TACTTGATTCACCGCACCT 59 1206532 1206550 AATTCCCTCTAGCCGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 2 1 1 79 3L 1206373 1206391 CTACTTGATTCACCGCACC 58 1206532 1206550 AATTCCCTCTAGCCGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 1 3 3 80 3L 1539067 1539086 CATCACGCTGATATGTCAGG 58 1539125 1539210 TGTCGAGGAAGACATCTATACAG 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0302310 1 1 5 90 3L 1635310 1635330 AAGAGGAAATTCTGGCTTCAG 58 1633798 1635198 CGTCTTTCTTTGCAATAATGCC 59 NA Nonspecific Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 1 5 5 98 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743973 1743991 TTGAGCAGAACAGGATCCC 59 NA Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 1 2 2 80 3L 2299262 2299769 ACCTAAAGCTGAGTGACCT 57 2299813 2299831 GGCTCATCGAACAGTACAG 58 NA Nonspecific Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 133 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463164 2463182 TCCTTGAATAGCTGCTGGT 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 2 4 4 80 3L 2498019 2498105 CTCTGGAAGATGTGAAGATAAACAC 59 2498141 2498161 AGATCCAGCGATTTACTCCAG 59 NA Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 2 1 1 116 3L 2595894 2595916 CACGATGAGAATATTCTCGAGTG 59 2596048 2596066 TCTCTTGGCATACTTGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 2 6 15 80 3L 3083798 3085210 GCCACTTATATGGTCACGC 58 3085252 3085272 ATATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0302300 3 1 6 80 3L 3221969 3222373 CTTTAAAGACGTGAGATGGCA 58 3221909 3221928 CTTCTTCAACAAGAAGGCGT 58 NA InUTR Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017 1 1 4 108 3L 3350329 3351509 ATCGTTGGCATCACAATATGAG 59 3351578 3351596 GAACTTGATGATGCCGTCC 59 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073075 2 1 2 156 3L 3375159 3375237 AGAAACTACGTCCATTATTGCC 58 3375354 3375372 ATGATGCCTCGAGGAAGTG 59 NA Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160 2 1 2 64 3L 3905509 3905530 CGTGTTGATATTGCTCAAACAG 58 3905613 3905635 TGGATATCCCAGTATCCAAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 3 2 2 174 3L 3908526 3909017 AGAACTACGATGATGAGCCC 59 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 2 3 3 80 3L 4082635 4084745 AAACTGACGGCATATGATCTC 58 4082575 4082594 ATCGATTACCTTCAGCAGGA 58 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0300010 1 1 2 124 3L 5810675 5810695 ACTACTGCTTCCATAATGGCA 59 5806561 5809755 TTCCTGCCAAGAGATGTCG 59 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 2 3 3 80 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609816 6609835 CGCTTTGAAGATGTCCAGTG 59 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 1 3 3 80 3L 6609689 6609783 CAGATCTGATAATCTACTGCATTCG 59 6609821 6609839 ACAGCGCTTTGAAGATGTC 58 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 1 3 3 80 3L 7558021 7558041 CCATCAATAAGTGCGATTGTC 57 7558083 7558163 GGCATTCGTCGATATCGAG 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 2 13 15 84 3L 7703369 7703457 CTTCTCGATAATGACCATAATCCG 59 7703308 7703329 TTTGGTTACCATAATGGGAAGC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 3 4 15 157 3L 7654600 7655093 GATCTCATCGCAGAAACAGG 58 7654462 7654480 TTTGGTGTGGGTGTATCGT 59 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 2 2 2 154 3L 7772025 7772043 AAAGCCTGAGTACAGAGCA 58 7771828 7771909 AATGTCCACCTTTAGTTGCTG 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076777 2 1 7 84 3L 7813118 7846291 GCATTAATGGCAGGAAATCTC 57 7811290 7811311 CAGATGATCTCTTTGCTATTCG 57 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 3 2 4 155 3L 7926881 7928485 CGGAGAAGAATGAACAGGT 57 7926208 7926226 GATAGGAGGCATCTAGGCA 58 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076766 3 1 2 117 3L 7967277 7967416 CAAGTAGTTCAAACAGCATCAG 58 7967181 7967200 CTGCTACAGGAGAATTTGGT 57 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 2 3 3 84 3L 8181668 8182392 ACGACTGGATGGGTTACTC 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 2 3 3 84 3L 8181668 8182392 ACGACTGGATGGGTTACTC 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 3 4 5 183 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347117 8347135 GGGCTTGTGAGAGTACCAG 59 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 2 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727349 TGGACAAGTTCTTGACTTCG 58 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 2 3 3 64 3L 9127983 9128098 ACAATTATTGGGTTGGCAGC 59 9128125 9128143 CACCACAATGCTAACGTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 2 2 3 140 3L 9721699 9721819 CACCCTGGACTTTATTAGATCAC 58 9721918 9721937 TAAAGTTGAAGCGAGTGAGC 58 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 1 3 4 171 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856556 9856574 GATCTCATAGACGGCTCGT 58 NA Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 3 2 2 80 3L 9862409 9862552 TGGATCACATTAGGAACAAGG 57 9862591 9862612 TATTCAAATCTATCTCGCGCTC 58 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349 3 1 5 264 3L 9965454 9965472 AAGAAGTGTGCTCATTCGC 58 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300239,FBtr0300238,FBtr0300237 2 3 3 60 3L 9966061 9966082 ATTAGCCTCTGTTAGTATCGTC 57 9966195 9966213 CTTCCAGATGAGGAACCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 3 4 5 126 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109441 11109459 GGGAGTCTGGAACAGATCC 59 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076138 2 1 2 80 3L 11617286 11617369 TTTATGTGGTGTCAGAAGGAG 57 11617226 11617246 GAGCCCAATTACTGGAATCTC 58 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300726,FBtr0300097 1 2 3 80 3L 11684343 11684425 GAGCAGCAATATAAATAGTGTCCTC 59 11684287 11684306 CCATTGTGAGAAGATTGGGC 59 NA Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 2 2 2 80 3L 11714552 11715111 CCCTCTATTCCGGTATTTGG 57 11715154 11715172 TCAGGGTGTAGTAGGTTCC 57 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 3 3 6 107 3L 11811263 11811281 AAGGACATTCTACTGCGTG 57 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 1 2 2 80 3L 11999276 11999598 AGAACTTTGAACAGATGCTCTC 58 11999639 11999657 TGGCTACATTTCCAAGCAC 58 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 1 2 3 80 3L 12493241 12493324 CCTAAGATACTTGATCGATATTGGC 59 12493185 12493208 ATATCCAGATTCTCTACGAGATGG 59 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354,FBtr0075950 1 2 2 199 3L 12746675 12746693 GTGTTTCCTGTGCTAGTGG 58 12746434 12746513 TTAACCATGTCTTCACACGT 57 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 1 2 2 85 3L 14858471 14858826 TCCTGACAGTTAAGGAGCT 57 14858875 14858893 GAACACATCACTCGACTCC 58 NA Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 2 1 1 92 3L 15490340 15490358 TACGACTCCATCAGTCCAC 58 15490482 15490500 TTCCCTCTTGGCTAACTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 1 1 3 127 3L 15516168 15516186 CATTTGCAAGACCTGAGGG 58 15515672 15516079 TTAAATGGTCTGTCCAGAGCT 59 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 2 4 4 81 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593967 15594347 CCAAAGAATGTTGCAATGCG 59 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075576 2 1 2 111 3L 15671627 15672917 ATCGAAGGACCAGATCTGAG 58 15672989 15673009 CGATTTCCCAAGATGGAACAC 59 NA Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 1 2 2 80 3L 16118876 16118962 CAGTTACTGGATAAAGAAATCCTGG 59 16118999 16119018 ACGAGCAATGCGTATAAAGG 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 2 2 4 107 3L 16404181 16404199 ATCTGTACCAGTTCTCGCG 59 16400450 16404114 GATCGACATTCTCGTATTTCAGG 59 NA Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 1 2 2 134 3L 16777688 16777706 ACACATTGTGCAATCTGGG 58 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 2 2 2 135 3L 16777687 16777706 AACACATTGTGCAATCTGGG 59 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 1 7 12 80 3L 16905366 16905384 CTACGAGAATGTGTTCGCC 58 16905425 16906340 TCTTTGTAGGACAGATCCTTGG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 2 7 12 123 3L 16905420 16906332 CGACTCCAAGGATCTGTCC 59 16906417 16906437 TCCACAGTAGATCTTATCCGC 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 2 2 5 80 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978436 16984130 GTAGTGGTCTGAGTCATCCTC 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 1 2 7 110 3L 17527654 17531772 AACAGTGATAACGACTCTGG 57 17531914 17531932 GATTCTGACATACGGGTCG 57 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 2 2 4 92 3L 17591983 17592001 TTTATCGACGATGCACTGC 58 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 3 3 3 138 3L 17748902 17749051 TGCCAAATATGTACGATCTGGA 59 17748785 17748807 TTCCTAGAAGGAGCATAGATCAG 59 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 2 2 2 85 3L 18747722 18748242 GAAATTGTGCTTCGATTCTGG 58 18747593 18747611 CACGAATCATCGGTGAGAC 58 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 3 4 4 110 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620469 19620547 TAGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 2 3 3 60 3L 19748407 19748428 ATAAAGGGTTATTCTGGCAACG 59 19748307 19748389 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917 1 1 2 122 3L 19913349 19913367 TTAGCACCCTGGCTAACAC 59 19912382 19913267 CTGTATTATCTTTGGAGCTCAGC 59 NA Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 1 2 2 138 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997627 19997645 GGCATTGGTCTGATTAGCA 57 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 3 3 4 105 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254040 20254058 AGGTTCTGGAAGATCTGCC 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179 3 1 2 132 3L 20347968 20347987 GCAGGTGATCCATTACTCTG 58 20348082 20348417 TTCGTAGGTGTATGTGCTG 57 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 3 2 3 131 3L 20998179 20998197 GAATAAACCGCCACAGGAC 58 20995286 20998084 TTTCCCAGATGTTTGGTGC 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 2 4 4 179 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200640 CTTCAACTGATTCTCCAGATACTG 59 NA DesignNoJunction Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 3 3 3 63 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265936 21265954 CCAGTACCGATCGTTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 2 3 3 82 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612187 21612210 CTGGATGAATCCATCTTTGTACTC 59 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148 3 1 2 83 3L 23017233 23017251 ATATGTATTTGCCGTCGCC 58 23018213 23022949 GACTTGTCGTGTACTTTGGA 57 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 1 2 2 80 3L 24247014 24251603 ATTGGCAGGATAACGAACGA 59 24251640 24251664 GAGATTGCCTATCATAGTGTTTACC 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 2 2 2 80 3R 28037 28110 TGGCGATGTACATTTCTACGA 59 28151 28170 AACTCACTGACGAATCGAGG 59 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 1 5 5 126 3R 66130 66148 CAAGAGGACTTGGACTCGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 2 2 2 80 3R 1434216 1434238 GAGCATCTGAACGATAATTCCAG 59 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 3 5 5 156 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684160 1684178 CATCACCGAAGCACAATCG 59 NA Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600 1 1 2 114 3R 2091005 2091025 GCCAAGTAACAAACTATTGGC 58 2091101 2091997 AAACACAAAGCAGTCCACC 58 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089278 3 1 4 136 3R 2537663 2565280 ACAATCAGGCTGAATTCGT 57 2537545 2537563 TATCTCGATCCTCCTTGGG 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 2 4 11 95 3R 2724255 2734259 CGAAGTCAGTTTGAACGCA 59 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 3 2 2 97 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322509 3322528 GACTGTAACATTCCCGTGAG 58 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081877 3 1 2 81 3R 4448070 4448088 GGCCAATTCAACGGATACG 59 4448133 4448220 CGTTGGCTCCTTTATGCTG 59 NA Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 3 2 2 61 3R 4476034 4476213 TTTGTTTGCAACCGGATCC 59 4475991 4476013 GATTATTCAGGCTTAGCTGATCC 59 NA DesignRelaxed Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 3 2 4 96 3R 4766832 4766853 GAATCTGTATGACCTGTTCGTC 59 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 2 3 3 101 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830324 TTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 1 2 2 75 3R 5121440 5121458 TTAGTGAACTGTCGACCGT 58 5121249 5121268 CAATACGTTTGTGTCTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 3 5 14 97 3R 5258549 5269739 CATTTCAGTTCCGGTGAGTC 59 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 1 2 4 98 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515510 5515528 AGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 1 3 3 83 3R 5590341 5590416 AACTGAAGTATCCAACGAAGGA 59 5590460 5590478 ACTACCTCGTTGACATGGG 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0112576,FBtr0112577 1 2 5 92 3R 5808010 5808028 TTCCGATGCGTCTATCGAG 59 5808083 5812379 GGAGTCCTTTCCCAAATGTG 58 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 1 3 6 80 3R 5930726 5930804 TGTTTCGAATCAAGATCGCTG 59 5930666 5930685 TGAACACAAAGGGTACATGC 58 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 3 2 8 86 3R 5955360 5960550 AAGCCAGCAAGTAATGGAG 57 5955292 5955310 TATGATGTCTGCATCCGTG 57 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 3 2 2 109 3R 5989000 5989018 CCTGCTCCTGTCTAATGCA 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 3 2 2 151 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361424 7361442 TAATTCATGACCCGCTTGC 58 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082519 2 1 4 127 3R 7647530 7648153 GCTTAATTTATGCTACGCAGC 58 7647423 7647441 GGCAGATCGAATTTCTCCA 57 NA InUTR Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 2 3 15 189 3R 7815238 7818476 CATTCTACGGCGACTTTATGC 59 7815069 7815087 TGAGATGAGTGGAGTTGCG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 3 3 15 189 3R 7815238 7818475 ATTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 CG42505 FBgn0260231 FBtr0300638 3 1 1 60 3R 7856530 7856548 TGCTCAGATGTTATGTCGG 57 7856425 7856443 AGAGAATCTGCAGATGCCT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 1 2 3 80 3R 7866598 7866617 CATGTGTTGTTGCCTAACCA 59 7866658 7866737 CGAAGACCTTTCCTAAGACGA 59 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 2 1 1 61 3R 8049042 8049062 CGTTCTTCAGAGATTCTTCCG 58 8049172 8049190 GGTCTACGATTGGCTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 3 2 2 107 3R 8497389 8497407 CTTTCTCAACACCGGAGGA 59 8497478 8497600 TCAACCAGACCAAACCCTC 59 NA Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 2 2 2 164 3R 8545129 8545147 TCTTGGACAAGCGCTACTC 59 8540713 8540733 ACATGTACTTGTCCAGATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 1 2 3 80 3R 8855691 8855709 GCGACAACACTTTCTACGA 58 8854595 8855648 TGATAAGGCTCTCATTGCAC 58 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 60 3R 9210262 9210281 GGAGGTTGACATTCCAATCG 59 9210393 9210412 TTGCTTGGGATCAAAGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 1 2 5 112 3R 9522481 9522557 TCCGGATAGCTTTCACCAC 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 1 5 5 80 3R 10090935 10090956 CGATAACCTTGTAGTTGATGCC 59 10090816 10090896 GAATAGCAATTCGGCTCACAG 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 1 3 7 94 3R 10651023 10651041 CTGTTTCCGAGGATTCTGG 57 10650886 10650965 TTTCTTTGTGGGCTGAGTG 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 2 6 6 81 3R 11027853 11027872 CTTCACAATGACGTTCCTGG 59 11027916 11027996 GTAAACGTCCTTGCTAGCG 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 3 2 6 195 3R 11025182 11025201 GTACTCTCATGCGCATTTGG 59 11025424 11026417 TGCGCAGTAACTCATCCTC 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 1 7 13 125 3R 11122321 11122339 AAATTCTTGAGAACCGCGC 59 11122428 11125014 CCAATTTACGGGCAACCTC 59 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926 1 1 2 154 3R 11189001 11189019 TAGTGCAGAAGCTCATCCG 59 11188811 11188883 CGGAATTGAAATCCGCAGG 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083244 3 1 3 81 3R 11742331 11743289 AGGCGATCGAGAAATTTCC 58 11742268 11742290 CGTAGTTGGTGTAATCCATAGTC 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 2 5 8 102 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480 1 1 2 80 3R 11885028 11885047 TACATCGAGGAGGGTTTAGC 59 11885090 11885217 GTAGTTGACATCCGTCCGA 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0083254 3 1 2 83 3R 12011541 12011622 ATCACCAAGGGAACCTATGG 59 12011668 12011686 AGGATCGCACTTGATTCCA 59 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 3 2 2 129 3R 12209798 12209821 CATAAGGATAAGGAGGATAACGGA 59 12205508 12209710 ATCCATTTAGGGCCTGGAG 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 2 3 5 134 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391565 12391583 CCTGATCTCCCTTGTGTCC 59 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 1 4 4 80 3R 12474343 12474430 GTAGACATTAAACGCTATGCCA 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351 1 1 6 85 3R 12551014 12558455 CTATCGCAGGTAAGATAAGATCTG 58 12536309 12536330 CGCAAGAGATTCTGAGTATCTC 58 NA Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 3 2 2 60 3R 12576905 12576924 TATTGGGTATGTGGTGTCCG 59 12576864 12576884 GTTATCGAAGGATGTTTCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 3 2 5 141 3R 12920462 12923769 ACACATCAAGCTGAAGTCAG 58 12920340 12920360 GTTCTCCGTTGTATTTGACCA 58 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 3 4 4 83 3R 13678332 13678350 GTCGATCTGGTACGGAGTG 59 13678396 13678746 AAAGAGCATCCCAAGAACCT 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0100377,FBtr0300242,FBtr0083535,FBtr0083537 1 6 7 80 3R 13793538 13832662 CAATGAGGAAGAGGTTCGC 58 13832703 13832724 CTGAATAACAAATAGAGCTCGC 57 NA Nonspecific Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 1 5 5 80 3R 14131624 14132351 GCAGCTCACTGAATATCCC 58 14131562 14131580 GAATACGGAGCACCATCAG 58 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 3 5 5 114 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132725 14133184 GGATACAGGATGGGACTGG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 2 3 14 91 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261498 14340778 TGGTCAGTGTTGTACCTAGG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 3 4 4 98 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981432 14981451 CAGTCAAGCACCTTGTTCAC 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0083765 1 1 8 80 3R 15308356 15310765 GTAATTGCAATTGTCGTGAGTC 58 15310806 15310824 TGATTCCAGGACCTTGCTC 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0083787,FBtr0301380,FBtr0301379 2 5 7 126 3R 15579568 15579982 GAATAAATGGCACAGATGGTCC 59 15586012 15586030 TCATCCGTCCACTGTTCAC 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 2 2 5 151 3R 15842346 15842364 CATTAAGGAGCGAACGGGA 59 15842475 15842565 GTCAAGAGATTGCCTATTCATCC 59 NA InUTR Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 1 2 5 148 3R 15842347 15842365 ATTAAGGAGCGAACGGGAC 59 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 1 2 2 80 3R 16326653 16326671 CCTGCAGATCTGATCAACG 58 16326274 16326610 TATGGCGTGCTTATAGTTGC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083960 1 1 8 127 3R 16618159 16618177 AGAACTGCGGCATAATCTG 58 16618267 16620869 ATCATTTAGCTGTCGCACTG 58 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 3 3 3 84 3R 17449362 17449568 GGGATTATTTCAAACGCCCT 58 17449297 17449315 ATATTCAGGCTGGGACTGC 59 NA Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 1 2 2 80 3R 17604913 17605281 TCTATAGGAATCTGAGTGGCC 58 17604853 17604872 ACTCCATGTGAAAGTCTCCA 58 NA Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 3 2 2 60 3R 17854854 17854941 GTGATGTCTGGTTCAATGCTC 59 17854963 17854981 CCCATGTCTGCATTGTAGC 59 NA DesignRelaxed Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 2 2 2 127 3R 19079153 19079171 AGACAGTTATGGACGTCGT 58 19079262 19079338 CGAATAGATCTTGGTGCGC 59 NA Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445 3 1 2 133 3R 19538851 19538940 GGAGAAATATGACTTTGATGGC 57 19538739 19538757 ATTGGGTATCTGAAGCGGA 58 NA Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 2 2 2 166 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006155 20006173 CCTGTTCTGTCGAGGATCC 59 NA Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 3 2 2 81 3R 20459020 20459038 ATACGTTCGCCAACTTCTG 58 20459081 20459163 CCGCTATATCTAATGTAGGCC 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100629,FBtr0301582,FBtr0301581 3 3 18 84 3R 20525148 20527827 AATGAACACCATCCTGCAC 58 20527872 20528751 TGATATCACCCGATACAGATCC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100624,FBtr0301582,FBtr0301581 1 3 18 80 3R 20513557 20513576 AGCGTCACTATACCACAGTG 59 20513618 20517191 CTTCATGAACCTTGACTCGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100631 3 1 18 115 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20525141 20528753 AGTGATATCACTTGCACGC 58 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112559 2 1 2 88 3R 20885201 20885220 CATTTCCAGTCGACACTTCC 59 20885271 20885940 GATCTGTGACGGTCATCGA 59 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 2 2 2 133 3R 21425812 21425830 CCCTCATATCACAGAACCC 57 21425927 21426004 GTAGGGTGCATATCTGACG 57 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 1 5 5 60 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 1 4 5 130 3R 21870341 21871201 TCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 3 3 3 84 3R 22293797 22293873 GCGATGATAGCGACTATGC 58 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085085 1 1 2 80 3R 22777615 22778738 AAAGGATAACGCGGTACTC 57 22777553 22777573 GATAGAGGATATCCTGGTCCA 57 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 3 3 3 80 3R 22981219 22981298 AAACCCAGTGTGCTTATTGG 58 22981341 22981359 ATTGTTATCCGCCATGGTG 58 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273192 1 1 2 112 3R 23143036 23143169 TGTGCAGGAGTTTATTCGTG 58 23142943 23142961 TTATTCTCATCGCCTCCCG 59 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 2 3 3 82 3R 23758111 23758191 CTGCATCTATGCCGAAAGC 59 23758237 23758255 AAACCTCGATCACAGACCA 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 3 4 4 111 3R 24146990 24147103 ATGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 3 3 5 112 3R 25423020 25423038 ACAGAGACGACATCGAAGG 59 25423186 25423894 CGTTGGACTTTCACATGGT 58 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 3 4 6 80 3R 25723353 25727909 CTGCGGAAGGAAATGAACG 59 25727951 25727971 TTGGATCGATTCGTTAAGCAC 59 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 1 4 4 116 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650760 26650778 CTGAAAGCATCTTGCTGGC 59 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201 1 1 2 109 3R 26925991 26926074 CCCTACAGAATGATCTTCATGG 58 26925903 26925921 AGACTCTGTACAAACGCAG 57 NA Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046 1 1 2 80 3R 27186211 27186230 ACGAATGGTAGTGGATCTGG 59 27186270 27186404 CGTGCTTTGATAGTAAAGTCCC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 3 3 3 81 4 87357 87476 GACAAGTACAGGTCGATGG 57 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 2 2 6 90 4 352620 363557 GCAAACACAATTGCGTGTG 59 352548 352568 GCGTAAGCTATGTAAGCTGTG 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 2 4 6 108 4 640794 640889 TGCTCAACAGATATCCAGGT 58 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 3 3 3 71 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645220 645238 CCTGGTTACTTCTTAGGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 1 9 9 80 4 1068496 1068515 GGATATCTGTCTCCTGAGGT 57 1068342 1068456 GTAAAGAATAACTCCACATGCC 57 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091632 2 1 3 86 4 1259712 1260193 TTGAGAACTGATGCTCCGA 58 1260243 1260261 TACCCAACCCGAAGTAGAG 58 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091632 3 1 3 86 4 1259713 1260194 TGAGAACTGATGCTCCGAC 59 1260243 1260262 GTACCCAACCCGAAGTAGAG 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 3 2 8 81 X 165640 167227 GGCAACAGCAATTACACCA 59 165577 165599 TATTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273443 2 1 4 116 X 312536 322080 CATTGTACATGTGGCAAGTC 57 211891 211911 CTTTAGTACAGTGATTGGCGA 58 NA InUTR Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 1 2 4 87 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516382 516487 AGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 3 5 6 87 X 640137 640556 CAAAGAAGCGAGACGACTC 58 640606 640625 AGTATGTGATAGCTGACCGT 58 NA Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299511 3 1 2 152 X 715999 737159 GAAGCCGAAGATAAGGTGC 58 715865 715883 AGAACAATGGTTCTTGGCC 58 NA Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070167 1 1 3 175 X 829790 829808 CTTGGAGTCTCCCAGTGTG 59 830438 830456 GATCACAAACTCGTGGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 2 1 1 129 X 1056324 1056342 ATTCGGATATTCGCAGTGC 58 1054060 1054078 CATTGTTGTTCGCACAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 1 2 2 80 X 1776708 1776785 TACTTGGCGAGATCTAAGATCC 59 1776649 1776670 GTACTCGATTATCATGGTGTGC 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070502 1 1 2 120 X 2590286 2590366 TATCCTAGACAAGGCGCTG 59 2590184 2590202 CTCCAGTTTCACCGATGAC 58 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 1 3 3 68 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608 2 1 3 92 X 3771414 3771432 CTGCAGAAACTCACCATGG 58 3771488 3773054 CAATGGGTAAGTGTGCTCC 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 1 5 7 96 X 5277596 5277614 GACAATATGTCCGGGAACG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 2 5 7 102 X 5277590 5277611 TCTAATGACAATATGTCCGGGA 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953 1 1 2 92 X 6012215 6012234 GAAATAATCAGCCGGCATCC 59 6009597 6012165 CGTCAGTATTTGGAATACTGTGAC 59 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0089393 1 1 2 88 X 6014328 6014347 GCGAGAAAGTTAACGGAGAG 58 6009597 6014278 CGTCAGTATCTGGAACACTG 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 2 4 21 81 X 6986732 6986756 GTCCTACTATAACTTTAAGATGGCG 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 1 3 7 98 X 8111098 8117669 TAAAGCAATGGAATCGCCG 59 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 3 2 6 82 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8445793 GGTAAATTGTCCTGTATCGCC 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 3 4 6 93 X 8917352 8918118 TGGAAGAGCCCTATACTGGA 59 8918296 8918315 CTTGTTCATGTAGTGCACGT 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302663 1 3 6 92 X 8918737 8918755 TGGATACCCTAGACTCCGG 59 8918808 8919207 GCTCTTGACTTTCCAAATAGGT 58 NA Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300000 3 1 2 83 X 8944960 8945079 AAGGATGAGGGACAGAACG 59 8945125 8945144 GACAAAGATGAGCTCCTTGC 59 NA Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071374,FBtr0071373 2 2 2 98 X 9401287 9404202 TATCCTTCAGTGGCAGTCG 59 9401207 9401225 CATCCATGATGTCCAGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 1 4 4 80 X 9674917 9675201 GCCCATGATATTGAGGCCT 59 9675245 9675263 CTTGTCCGAAAGGTTCACC 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 1 3 4 88 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 1 2 2 108 X 9873643 9873812 CATACTTTCTGAGGCTCATGAC 59 9873556 9873574 GAGTTCCGAAGAGTTGGGT 59 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 3 2 2 73 X 10499358 10499376 GCATAATGCCACAGAACAG 57 10499205 10499223 GTACATCAGGTCGATCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 3 4 4 136 X 10672153 10672255 ATATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 2 1 1 268 X 11626557 11626575 ACCCTGTTGCTCTACATGG 59 11621317 11621335 TGTGCTTGTAGAACTGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 3 4 4 141 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698359 11698377 GGTCAACTGATTCTTGGCG 59 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568 1 1 2 80 X 11763310 11763330 CCCATACGAAAGGAGATCCTC 59 11763370 11763499 ATCATGAGGAGTGAGTCTCCT 59 NA Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 3 2 2 82 X 11805154 11805174 GAGATCATCACGATAGTCTGC 58 11805037 11805110 ATCGGGTTCAGGATTGGAG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 2 2 10 88 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848304 11856054 ATTGAGTTCGAATCGTGCC 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 1 2 6 89 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534863 12537914 GTCGTTCAGCTGATCTGAG 58 NA Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073695 2 1 2 97 X 12796996 12797376 CACATGAGCTATTGGCGTG 59 12796917 12796936 CATTCGTTCATGGTGCTCAG 59 NA InUTR Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736 2 1 4 82 X 13094934 13097760 TGAATAACATGGTAACGGTGAG 58 13094873 13094891 GACTCCGCCAATATTTCCG 58 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301298 1 2 3 119 X 13162290 13162739 TCGGTTCTCACAAACTGCA 59 13162189 13162207 CTGAATGGGTGCACTTGTC 59 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301299,FBtr0301298 3 3 3 83 X 13164475 13164493 CAGGGATGGCATGAAACTC 58 13164340 13164429 CTCAGGATGAAGCAGTTGAG 58 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 1 3 3 80 X 13221901 13221919 CAAGCCACGTTACATGGTC 59 13221963 13222197 CTCTTCTTGATGCCCTCGA 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 2 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301450,FBtr0301449,FBtr0112980 3 4 5 97 X 13549984 13550002 CGCATACGTTCACCTACAC 58 13550063 13554786 GAAACCGCTCACATCTTGG 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 2 2 4 80 X 13591267 13600190 TATGTGAATGGCTTCCTTGG 58 13600231 13600251 GGTCTTCTCATCCGTATTCAC 58 NA Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 2 2 2 80 X 13608754 13608861 GTCAGATTACTCAAGCGACG 58 13608902 13608922 AGATCGGATGTCGTTATCGAG 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 2 4 4 106 X 14642087 14642674 CATTCGAGCCAATGGTCAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 2 3 3 69 X 15276615 15276633 GAACAACATACCCGGATCG 58 15276374 15276582 ATGAAAGCTGGGAAACTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 1 2 2 80 X 15293122 15293257 CAGGGCCTAATGGTATACGA 58 15293061 15293085 CGCTATCATATCGAAGATAAAGTCG 59 NA Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 3 3 3 209 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377410 15377428 CTCCTATGACTCTGCTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 2 3 3 104 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802263 15802281 TTGCGTACTGATTTGCTCG 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074213 1 1 5 80 X 16174009 16175016 AGGTCTAAGAAGAATGTTCGTC 58 16175057 16175075 CAATTGGTTCTGGACCTGG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 2 9 9 80 X 16273082 16273101 CCATTTGGTTATGCATGAGC 57 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 1 5 5 108 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276867 16276947 CAAAGTTGTGCAAGTCCTG 57 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0074298,FBtr0111023 3 2 4 81 X 16371599 16375374 TTTCGTGATTGTCATGGTATCG 59 16371539 16371562 CATAGTCTTGAAGGCTTGAATACC 59 NA Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074290 3 1 2 114 X 16486776 16486991 GACAACCGAGTTCCAATCG 59 16486680 16486698 GATTGACCACCTCATTGCG 59 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 1 2 2 92 X 16534257 16534340 AAATACATGGACAAGCGCA 58 16534183 16534201 GACCACGTTCATGAAGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074368 3 1 7 287 X 16588401 16588666 CACTAGATAAGCATGTGTACTGTC 59 16588137 16588155 CATCGTGCTTATGACGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074366 1 1 7 80 X 16588445 16588876 CGTGTAGGTCAAGTACTTACC 57 16588385 16588405 GCTGCCACATTAAATTGACAC 58 NA InUTR Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 1 7 7 60 X 16579562 16579580 GATATCCACGCACATGCAG 59 16579424 16579442 GAAGTTCTCGTAGTGCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 2 2 4 85 X 16602744 16602762 TATCCGTACGACAATACGC 57 16603312 16603422 GAGTAGGTCTGGAACATCG 57 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 3 4 6 87 X 17165360 17165379 AATCACGGAGCCAAATTGTC 59 17165429 17165530 CATTCAGGCACTCAACCTG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 2 4 4 102 X 17743515 17743535 TTCATAATCATCTGGCTGGTG 58 17743365 17743451 ACTTGTAGACCAGCCTAGG 58 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300971 1 1 6 80 X 17785899 17785918 GCAAGTCGAGATCAATACGA 57 17785958 17786496 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 2 2 6 60 X 17794817 17794838 CTGTTCAACATCTATCGCAAGG 59 17794859 17797996 GACCGATGCTATATGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 2 2 6 68 X 17796067 17796085 AATACGATAGCATCGGGCT 58 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089657,FBtr0089661 3 2 8 162 X 17837001 17839265 TATGGTGACATGACACCCG 59 17836857 17836875 AGTTCTGGCTCTGCATCTC 59 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508 1 1 2 147 X 17938963 17939208 GGATATGGAATCTCTTAACCCA 57 17939316 17939334 GTAGTTCAACCAGAGTCCC 57 NA Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 1 2 2 90 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584939 18584957 TAGGTCATCCCGAACTGTC 58 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 1 2 2 124 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092802 19093311 TAATGTTGTAGACGCGGCA 59 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 1 2 5 80 X 19455823 19456738 GCGAGTTCATCCAGATTGAG 58 19455762 19455782 TAAATTCCAGATCAAAGCGCC 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074734 1 1 2 136 X 19499589 19499607 TCATCGACACGGAGTTCAG 59 19499705 19503505 TTTAGTAGAGCTGGTGGACTC 59 NA Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 2 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 2 2 2 121 X 19601491 19601580 GAACTACAATGGAGCGCAG 59 19601388 19601406 TCTTCTTCAGCGTTGTCGA 59 NA Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 2 2 2 170 X 20540303 20540321 AAATTCGACAGATTCCGCG 59 20540455 20541712 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 2 3 3 84 X 20804408 20804428 CCCAATTTGAGAATGGTCAGG 59 20804254 20804272 AAATAACCGTTGGCAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0113007 3 1 2 90 X 20907652 20908642 TGGAAGACTACAGACCGAC 58 20908696 20908714 GTGCTGCACAAAGAAACTG 58 NA Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 3 2 2 81 X 20947145 20947169 GATACTAAAGAAGAGTGTGGATGTG 59 20947207 20948008 TAAAGGAACATGCTCGTCCT 59 NA Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070050 1 1 2 123 X 21491839 21491857 GAACCGCATCTTCGATCAC 59 21491062 21491752 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070050 3 1 2 123 X 21491839 21491857 GAACCGCATCTTCGATCAC 59 21491062 21491752 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301618,FBtr0301619 3 2 2 110 X 22396330 22396348 ATTTGAAGAGCAATCGGGC 58 22395758 22395776 TCCTCCGACACGTAAATCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 mir-289 FBgn0067703 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:85Ca FBgn0011966 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-3436a FBgn0086668 FBtr0091752 2 1 1 84 X 6636803 6636821 CAACTGCTGACGATACGTG 59 6636737 6636759 GTAGAGACTAGCTCATTGAAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ric8b FBgn0030117 FBtr0071318 2 1 1 70 X 9155208 9155226 TTAGTCAACGACCTGAGGT 58 9155256 9155278 GATTGCCTTGAGTATAAGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sep1 FBgn0011710 FBtr0077198 2 1 1 116 X 21230624 21230642 AGTTCACCCTAATGGTGGT 58 21230721 21230806 TTTGTTTCTCTATGGCGTCC 58 NA Drosophila melanogaster 61 CG1503 FBgn0031157 FBtr0077260 3 1 1 69 X 20976666 20976685 GAAACAGTTCATCCTGGTGC 59 20976346 20976364 AATCACCAGTAGGGACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15461 FBgn0040649 FBtr0077311 3 1 1 95 X 20357281 20357299 CGTTGAGTCGAGCAATCAG 59 20357434 20357453 TAGATGATCGTCAATACGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15461 FBgn0040649 FBtr0077311 1 1 1 93 X 20357281 20357299 CGTTGAGTCGAGCAATCAG 59 20357433 20357451 GATGATCGTCAATACGGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33487 FBgn0053487 FBtr0089464 3 1 1 100 X 20089133 20089151 GAGTACAAGGAGCTCTCCG 59 20088969 20089069 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG9577 FBgn0031092 FBtr0070007 1 1 1 103 X 20061754 20061772 TCATCGCTAGCAAGAGTCC 59 20061838 20061923 CAGCAGGAGAATGTGATCCA 59 NA Drosophila melanogaster 61 Sec61gamma FBgn0031049 FBtr0074745 2 1 1 186 X 19537483 19537903 TGAATTAAAGCGGAGAATCCC 58 19538051 19538069 GATGAAGCCCATGATGCAG 59 NA InUTR Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299623,FBtr0299624,FBtr0299622 2 4 4 80 X 19038524 19038609 ATGTGTTTCGCATCAACCG 59 19038462 19038481 CCAGGTACAAACTGTTCACC 58 NA Drosophila melanogaster 61 CG7332 FBgn0030973 FBtr0074647 2 1 1 80 X 18780767 18780880 CATTTAACCGTTCTGTTCAGCA 59 18780921 18780939 TTTGAAGATCCGACGACCA 59 NA Drosophila melanogaster 61 CG15042 FBgn0030937 FBtr0074619 2 1 1 60 X 18421126 18421146 ACATAAACATCCTAGAGGGCA 58 18421086 18421107 TTGATATCGCTTCGTAGTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 2 2 2 80 X 18392028 18392047 AAGGTCATCAGGAACAAGGA 58 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 CG15043 FBgn0030929 FBtr0074626 2 1 1 132 X 18387950 18387968 ATCCAGCAGATGGAGAAGG 58 18387763 18387783 GTGGGAATTCGTAAGTGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15044 FBgn0030928 FBtr0074627 3 1 1 60 X 18385865 18385883 CATCATGGCATCGGTATCC 58 18385823 18385843 GTCCGTATAGTAGAGATCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8173 FBgn0030864 FBtr0074475 3 1 1 98 X 17602233 17602329 CTATGTGGGAACTAACCTCTG 57 17602155 17602173 TAGATAACCAGGCCAAAGC 57 NA Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 3 1 1 70 X 17107074 17107267 TTTGATTCTAGATGCTGCGA 57 17107298 17107318 CAATAACCTCTGTGTTCAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4872 FBgn0030799 FBtr0074339 2 1 1 84 X 16776274 16776363 CATATTAACGCTGTGGGAGC 59 16776410 16776428 AATCCACGTAGACCTTGGC 59 NA Drosophila melanogaster 61 Rrp45 FBgn0030789 FBtr0074355 3 1 1 82 X 16684541 16684719 GGGAATCTGTATGACGCCA 59 16684477 16684497 CCGTCCTTATACCAGACATCC 59 NA Drosophila melanogaster 61 TwdlX FBgn0052571 FBtr0074325 1 1 1 140 X 16625905 16625924 CCAAGAAGTCTAATGCCCTG 58 16626027 16626151 CATAGTTGGCCTGAATGGT 57 NA Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 3 2 2 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 3 2 2 80 X 15875693 15875779 AAGATATGCTACTCGGAGGAG 58 15875633 15875651 TAGTGGATGGTCCCATTGG 58 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 2 2 2 113 X 15743034 15743176 GGAATTACCTACATCCAATACTCC 58 15742944 15742962 AGTGAACTTCACATGGCTC 57 NA Drosophila melanogaster 61 mRpS30 FBgn0030692 FBtr0074094 2 1 1 84 X 15680650 15680833 ACGACTACTACAAGCATCTG 57 15680880 15680898 ATGATCTGCGTTAGGATGC 57 NA Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191,FBtr0074190 1 2 2 134 X 15678778 15678796 AATAATGTGCGGAACAGCG 59 15678594 15678612 CAACTTATTGGGCTGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 2 1 1 65 X 15660249 15660343 AGATAATCGCATAGTGTCCGG 59 15660204 15660222 TTCAGTATGACCTGCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074201 3 1 2 100 X 15638919 15638937 CCAACATCAGTACGCTGTG 58 15638448 15638857 GGAGGTTTCCTTAACAACAGC 59 NA Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074079 3 1 2 112 X 15341857 15341939 CTATGTCTGCTGGTTCCGA 59 15341763 15341781 CCTGCACAATCGAGTACAG 58 NA Drosophila melanogaster 61 dah FBgn0015926 FBtr0074007 2 1 1 82 X 15224010 15224030 GGAAATATCGCAGTTTCTGAG 57 15224074 15224154 CTGAGGCATGTGATAGCTG 58 NA Drosophila melanogaster 61 gce FBgn0030627 FBtr0074004 3 1 1 88 X 15209272 15209369 GATTGAAGCATGCCTTTGG 57 15209421 15209439 GAGAAAGAAGCTGTCCAGC 58 NA Drosophila melanogaster 61 Ste:CG33242 FBgn0053242 FBtr0300091 2 1 1 110 X 13947324 13947342 TCTGATACACAGCTGGACG 59 13947172 13947250 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG1681 FBgn0030484 FBtr0073778 2 1 1 88 X 13302600 13302699 ATAATGCGGTGAATCTCGC 58 13302751 13302769 CATCATGAACTTGCGGGAG 59 NA Drosophila melanogaster 61 CG12725 FBgn0030483 FBtr0073788 2 1 1 60 X 13296385 13296405 CGCATAGATCTGGAAAGTGAC 59 13296345 13296365 AATCGAGTTCAGTCAAGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lic FBgn0261524 FBtr0073720 3 1 1 123 X 12986247 12986327 CATCTCAGGCTACCTCGTC 59 12986414 12986432 AACATCCGACCTGATGTCG 59 NA Drosophila melanogaster 61 CG2209 FBgn0030441 FBtr0073717 3 1 1 60 X 12916430 12916448 ATCCAGAATTCGAATGCGA 57 12916469 12916490 ATCATAGTCTTCAAGGATTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4404 FBgn0030432 FBtr0073694 1 1 1 118 X 12799064 12799661 GATATCAAGGACACGGTTCG 58 12798965 12798983 AGGTAGTATTTGCGCTTGC 58 NA Drosophila melanogaster 61 CG11085 FBgn0030408 FBtr0073656 2 1 1 152 X 12510774 12513694 CAGATTCGGAACTGGAGCT 59 12513810 12513828 ACTCCACACTGGATTCGTC 59 NA Drosophila melanogaster 61 Cpr11A FBgn0030394 FBtr0073650 1 1 1 83 X 12382062 12382358 AATTCAAGCTGGAACTGAAGAC 59 12382402 12382420 TGACCACGAAGGTCTTGTC 59 NA Drosophila melanogaster 61 CG11802 FBgn0030346 FBtr0073600 3 1 1 60 X 11766055 11766076 TAATATAGTGATTGTGCGTCCC 58 11766016 11766035 CAAGTCCATGTCCACATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 2 2 2 89 X 11349144 11349162 CGCCGCAAACTATTAATCC 57 11349215 11349323 CCAGGAGGTCATTTACGTC 57 NA Drosophila melanogaster 61 CG34348 FBgn0085377 FBtr0112557 1 1 1 80 X 11237874 11237893 AAGTTTCGGACGTATCTGGG 59 11237936 11238017 CGTAGCCACCTTGATTTGC 59 NA Drosophila melanogaster 61 CG1657 FBgn0030286 FBtr0073448 1 1 1 96 X 11227171 11227266 CATCATCAACTGCATCTCGAG 59 11227324 11227342 TACGTATATGAGCACGGGC 59 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 1 2 2 70 X 10499258 10499374 ATAATGCCACAGAACAGCG 58 10499206 10499224 TACATCAGGTCGATCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 c12.2 FBgn0040234 FBtr0071321 2 1 1 80 X 9217737 9217809 TCGATGTACAGGTTCAATGG 57 9217852 9217870 CTCAAAGGCTTCCATCACC 58 NA Drosophila melanogaster 61 CG11042 FBgn0030094 FBtr0071301 1 1 1 60 X 9047637 9047659 CCTTAAAGATCACGGATTACCTG 59 9047679 9047697 CCACTCCAACAACTGTCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 1 2 2 80 X 8977449 8977467 CCTCATTTACGAGGACGAC 57 8977507 8977587 CATGTGTAAGTTCCTAGGTTCTC 58 NA Drosophila melanogaster 61 CG15345 FBgn0040928 FBtr0071176 1 1 1 60 X 8292172 8292249 TGACAAAGTCGAGAATTTGCC 59 8292132 8292153 AATGAATTGACCATGACTTCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15343 FBgn0030029 FBtr0071178 3 1 1 97 X 8166791 8166814 GAACCGATTAACTACGATGATCTC 59 8166646 8166735 CAAGCGGTATAGCTTGCTG 59 NA Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127,FBtr0071128 3 2 2 60 X 7848276 7848294 GATGAAGGCGAAGATGTGG 58 7848234 7848255 CGCTATCAATCTTAAAGCACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1677 FBgn0029941 FBtr0089712 2 1 1 150 X 7176177 7176197 CGCCTTCATATAAGAGACCAG 58 7175984 7176065 TCCGATGAGTCTGAGTCTG 58 NA Drosophila melanogaster 61 Nf-YC FBgn0029905 FBtr0070974 2 1 1 136 X 6713123 6713203 CTGACTAATGTGCCGATCG 58 6713005 6713023 TGGGTTGGTATGATGACCT 58 NA Drosophila melanogaster 61 CG33667 FBgn0053667 FBtr0302416 1 1 1 80 X 6366276 6366355 GATTCTTGACTACTCCGAAGC 58 6366216 6366235 TTCTTAGAACGGGAAAGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869,FBtr0070870 2 2 2 86 X 5954538 5954616 TGTGAGGGACTTACCAGAG 58 5954666 5954684 TTGAAGGAACTCTCCGAGG 58 NA Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070810 3 1 2 120 X 5650870 5651901 ACAAAGAAGCTAAACTCGCTG 59 5651983 5652001 GTTTGCGAGTTATCGGGAC 59 NA Drosophila melanogaster 61 CG3309 FBgn0029756 FBtr0070798 2 1 1 152 X 5222326 5222345 ATTCACGACAGCGAATTTCG 59 5222134 5222213 CATGTTCTTCTGGTTGTCCAC 59 NA Drosophila melanogaster 61 CG15579 FBgn0040906 FBtr0070657 1 1 1 73 X 4205670 4205688 TTCCATCGTCCACTCAACC 59 4205615 4205633 ACCTCGTCAACAGTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 3 2 2 83 X 3799819 3799837 AATAGCATCGGTGGAGCTC 59 3798614 3799772 TAGTGACATGCGATCCCTG 59 NA Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070587 3 1 2 134 X 3467502 3467521 GAAAGTGAACGATGACACCG 59 3467320 3467405 TTATCGGGCGTATTCAGCA 59 NA Drosophila melanogaster 61 CG10793 FBgn0029656 FBtr0070536 1 1 1 60 X 3210211 3210229 CGCCGCAATATTCTCTACC 58 3210169 3210190 CACTCGCATAGTATCCATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458,FBtr0114528,FBtr0070457 3 3 3 129 X 2340769 2340790 CCAGAACTCCTTATATCCACTG 57 2340597 2340679 CGGTTTGTTCTCATCCTCC 58 NA Drosophila melanogaster 61 tko FBgn0003714 FBtr0070459 2 1 1 292 X 2337771 2337790 TTACGAAACAGTTGGCTTCG 59 2336497 2336515 AATGTTGTGCTCTTGCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300879 2 2 3 102 X 2273236 2273318 CGGCAGATCTTTCTAGTTAACG 59 2273155 2273173 CAATATCACTCAGCGGCAC 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 1 3 3 103 X 2236289 2236307 TGAAACACAATCGTCCCAG 58 2236374 2236460 CTCCGCCAGAATATTCCAG 57 NA Drosophila melanogaster 61 CG33218 FBgn0053218 FBtr0070400 1 1 1 60 X 2224343 2224362 TCTTTGGTTGGGTAAACTCC 57 2224385 2224460 GGGTTTCTTGATGCTCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18031 FBgn0023550 FBtr0070423 1 1 1 80 X 2097029 2097174 AACAAGAAAGTTGATCATGGGC 59 2096970 2096988 CGGTAGTCATTCACCAGGG 59 NA Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 3 2 2 81 X 1985852 1985870 TTGACCACAGTCATTCCGT 59 1985912 1986003 CCTTGAGAATCTTGATCAGGAC 58 NA Drosophila melanogaster 61 CG4045 FBgn0025629 FBtr0070331 3 1 1 169 X 1969646 1969714 ACAGCTTCGACTATCCTGC 59 1969495 1969513 GATTTCCATGCCGATGGAC 59 NA Drosophila melanogaster 61 moody FBgn0025631 FBtr0070341 2 1 1 81 X 1941136 1941154 AACCTGTTGACCGTAGTGG 59 1941006 1941096 CAATACAGAGGCTGATGATAAAGG 59 NA Drosophila melanogaster 61 CG32801 FBgn0052801 FBtr0070355 3 1 1 63 X 1796688 1796706 AGATCTAACCGGCACATCC 59 1796484 1796661 TTAGCGGATGAACTTGGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG14806 FBgn0029594 FBtr0070313 3 1 1 122 X 1774644 1774721 TTTCCAGTTCAGCCTACCG 59 1774806 1774825 ATATAGTCGCACTTCACCGT 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968,FBtr0070249 1 3 3 87 X 1117713 1117731 TTATTTGGCCTCCAGTGTG 57 1117576 1117662 ATAGGGACTTCTCATGCCC 58 NA Drosophila melanogaster 61 CG13362 FBgn0029531 FBtr0070150 3 1 1 225 X 644738 644814 GACAACAACGGAAACCAGG 59 644531 644549 CGGAGCAGTAACTTCTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 3 2 2 81 X 40880 40956 AGCCAGAAAGTACTTCAAAGC 58 40819 40843 GGATATTATACCAGAAATGCTCCAC 59 NA Drosophila melanogaster 61 Su(Ste):CR42410 FBgn0259841 FBtr0300140 2 1 1 60 U 6275660 6275678 CCAAAGCGCTTAACTTGCA 59 6275618 6275638 AAAGTGGCGATTAAGTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40188 FBgn0058188 FBtr0302217 2 1 1 133 U 2232706 2232865 TTAGAGCTGGGAACGTCAC 59 2232962 2232980 AACTGCATGCAATGACGTC 59 NA Drosophila melanogaster 61 snoRNA:Or-CD8 FBgn0086061 FBtr0114337 2 1 1 61 3R 25688374 25688392 CTGCAATTGTGCTCTCGAG 59 25688415 25688435 TCAGTAGTCCGAACATAAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:MeU5-C46 FBgn0043853 FBtr0081560 1 1 1 60 3R 3298916 3298937 GATGAAATATTCGACATCGGAG 57 3298877 3298896 CTAGAGTCTGAGCCTTAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31432 FBgn0051432 FBtr0082616 1 1 1 60 3R 8148336 8148354 CTCTTTAGCTCAGTGGCAG 58 8148294 8148312 TGAGGATTGAACTCACGAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31356 FBgn0051356 FBtr0082558 1 1 1 60 3R 8032299 8032317 CTCTTTAGCTCAGTGGCAG 58 8032341 8032359 TGAGAATTGAACTCACGGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42652 FBgn0261504 FBtr0302398 1 1 1 60 3R 2646109 2646128 TAATCACGCTTCTGTGAGGT 59 2646068 2646086 GCTACGCAGTAGATCCCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 krz FBgn0040206 FBtr0085877 2 1 1 61 3R 27875581 27876998 CTTTGTGGGTGAGAACGTG 59 27875538 27875557 GAATAGTTAGTCGCACCGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 2 6 6 85 3R 27553964 27554122 GGATGATCTAAATGAAAGTCGC 57 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 1 3 3 82 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043631 27043649 CAATGGTCGCAAGTACTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15556 FBgn0039821 FBtr0085737 2 1 1 80 3R 26954997 26955017 GACGGAAGAGGAAATCAAACG 59 26954878 26954959 GGTAGCTTGGTATCATTCAATCC 59 NA Drosophila melanogaster 61 Cyp4c3 FBgn0015032 FBtr0085712 3 1 1 87 3R 26725498 26725579 CTTTCTAATGAGGACATTCGC 57 26725628 26725646 ATAGTGTCCAGGAAATGGC 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302606,FBtr0085674,FBtr0085678,FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 13 13 83 3R 26421160 26421181 GGGAGACTATTGTGGAGATCAG 59 26421037 26421118 TATTGTTGGCATCCTTTGTGC 59 NA Drosophila melanogaster 61 CG9698 FBgn0039784 FBtr0085657 2 1 1 84 3R 26341140 26341216 TGGAGTGGATTATGGCACC 59 26341264 26341282 CAAACGTGGATGCTGATCC 59 NA Drosophila melanogaster 61 CG2224 FBgn0039773 FBtr0085691 1 1 1 80 3R 26283064 26283084 CATACGCATTGCTCCTATCAG 59 26282937 26283028 GAAACCAGTAGTATTGTACTTAGGC 59 NA Drosophila melanogaster 61 CG7950 FBgn0260468 FBtr0085564,FBtr0085563 1 2 2 60 3R 25882723 25882745 GCATGAGTGGTTACCAATATCTG 59 25882870 25882888 GTCACGGAGTCTGGATCAC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 1 2 2 80 3R 25828886 25828977 AGGACAACATTGTCATGGC 58 25829019 25829039 GGTCGAAGTAAGATATGACGC 58 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085541,FBtr0085540,FBtr0085539 1 3 3 60 3R 25573783 25573802 ACGTGGTCAAGAGCTATCTG 59 25573742 25573764 TCCTTCATGGTGTAGAAGATGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2006 FBgn0039664 FBtr0085425 3 1 1 60 3R 25316141 25316159 CCTACAATGGGCAGTACGA 59 25316182 25316201 TGGATGAGATCGTACATGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ligatin FBgn0041588 FBtr0085410 3 1 1 169 3R 24977153 24977171 CTGTACACCCTGTGGATCG 59 24976944 24977020 TTTACGGCCATCAACTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11874 FBgn0039634 FBtr0085416 3 1 1 80 3R 24936984 24937088 GGATGATGAATTCAAGGAAGGA 58 24936925 24936944 TCGAATAGGTTTACATCGCG 58 NA Drosophila melanogaster 61 CG14519 FBgn0039619 FBtr0085340 2 1 1 125 3R 24817029 24817048 TTTAATTGGTACAGTGCGCC 59 24817135 24817154 TGTTGCAGATATAGCTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5527 FBgn0039564 FBtr0085255 1 1 1 60 3R 23781867 23781886 GTTCAACAGGCTCTACATGG 58 23781973 23781991 GTCAGAGATCTCCGAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mes-4 FBgn0039559 FBtr0085267 1 1 1 80 3R 23759033 23759109 GATGATGCAGTTAAGGCCC 58 23758971 23758989 AGGCTTCACATGGATACGA 58 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 2 3 3 82 3R 23758111 23758191 CTGCATCTATGCCGAAAGC 59 23758237 23758255 AAACCTCGATCACAGACCA 58 NA Drosophila melanogaster 61 Cpr97Eb FBgn0039481 FBtr0085135 2 1 1 112 3R 22916316 22916709 TGAAATTGACCTTGAGCTTGG 59 22916224 22916242 GTTGTGCTTGTCGATCTGC 59 NA Drosophila melanogaster 61 BM-40-SPARC FBgn0026562 FBtr0085094 1 1 1 80 3R 22695845 22695927 GGAGAAGAACAAGATCAAGGA 57 22695785 22695803 TTGAGTAGATTGTGCTGCA 57 NA Nonspecific Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084994 1 1 6 101 3R 22087130 22087148 GTTAACCGCTCTCCTCCAG 59 22083753 22087066 CGAGTGTAGTTCGAACTGGA 59 NA InUTR Drosophila melanogaster 61 CG6073 FBgn0039417 FBtr0085003 1 1 1 122 3R 22013586 22013606 CACGATGTGATCCTAAACGAG 59 22013428 22013502 AGGTAGGTACTGCAGTTCG 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471,FBtr0301466,FBtr0301468 1 7 7 101 3R 21570597 21570712 CAATGCATATGCTCCAGCA 58 21570514 21570532 GAGAACAGTGGCCATTCAC 58 NA Drosophila melanogaster 61 CG5039 FBgn0039356 FBtr0084900 2 1 1 161 3R 21504732 21504750 GGGATTGCCTAAAGAGCAG 58 21504875 21504948 CGTTATTCGCTCCATCCTG 58 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113349 3 1 5 110 3R 21149461 21151163 AATCAAGCTTGTTGCTCAGG 59 21149370 21149391 ACTAGGTTATCATGGTACACCT 58 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 1 2 2 136 3R 21108535 21108620 AAGAAATTCTACGCTGCCC 58 21108720 21108738 TTCCTATAGCAGGCATCCT 57 NA Drosophila melanogaster 61 CG31106 FBgn0051106 FBtr0301022 1 1 1 80 3R 21042172 21042261 TGCTTCAGATTATTGGATTCGG 59 21042299 21042320 CGTTTATGACCATCATCAGGAG 59 NA Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204 3 1 2 103 3R 20925093 20925111 GTTCAAAGCACCCGAATCC 59 20925178 20925677 GGAATTTGAGGCACCATCG 59 NA InUTR Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 2 3 3 80 3R 20869765 20869841 CTTTCCGGAGTGTAAATGGTC 59 20869705 20869725 TTGACTAGATCGATGACGGTG 59 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 1 2 2 83 3R 20682414 20682485 ACTTCACCTACCAAGGTTCG 59 20682350 20682368 GAACATCGAGAGGAGTCGG 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 3 3 3 80 3R 20677584 20677602 AGATGTACGAGCCCATTGG 59 20677646 20677716 AGTAGGTTGAGGAACAGCC 59 NA Drosophila melanogaster 61 CG5807 FBgn0027539 FBtr0084739 3 1 1 80 3R 20632459 20632478 ACAGCTAATGCTGAACTGTG 58 20632332 20632418 TTTGTGATGCCTATGATCCTG 58 NA Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 3 1 1 118 3R 20355899 20355980 GAAATCTAATCCTAATGCGGC 57 20355801 20355819 GAAAGATCCATCCACGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 3 2 2 83 3R 20199862 20199880 GTGGACACGAAATGGACAG 58 20199732 20199815 TAGGCATAGTCCCACTTCG 58 NA Nonspecific Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 6 6 80 3R 20025043 20025062 TAAGACTATGTCCGAGCTGG 58 20024921 20025002 TTGATCAGCGTAAACTTGGAC 59 NA Drosophila melanogaster 61 CG5524 FBgn0039164 FBtr0084573 1 1 1 80 3R 20015193 20015211 TGCTGAAAGGACTTTGGAG 57 20015070 20015152 GGTTCACTTCATCTGTAAACAC 57 NA Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 2 1 1 89 3R 19874145 19874221 AAACAAACCTGCAACCAGG 59 19874274 19874292 GAACGCAGTGAACATCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13599 FBgn0039128 FBtr0084493 1 1 1 85 3R 19757647 19757665 TCATTACCAACGCAACCAG 58 19757714 19757793 AGGCTTGTCGGATGATCTC 59 NA Drosophila melanogaster 61 sav FBgn0053193 FBtr0084356 1 1 1 117 3R 18885700 18886106 ATCAGCCAACTAGCTCTCC 58 18885601 18885619 TACGAATCGCTGGAGTAGC 59 NA Nonspecific Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 3 2 2 81 3R 18880540 18880617 TAATTACGATGATTGGGTGTCG 58 18880480 18880498 GAACACATCGAAGAGCACG 59 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 2 3 3 80 3R 18537937 18538031 AAGGAGACTATCACGGTCG 58 18537875 18537894 CTCAATGCGTCCGATATAGG 58 NA Drosophila melanogaster 61 CG5386 FBgn0038945 FBtr0084240 3 1 1 91 3R 18167913 18167931 TCCAAATTGGCTCGTTCTG 58 18167749 18167858 TGTTGTGGTGCTTTGTCAG 58 NA Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0111019 3 1 2 80 3R 17704015 17704034 GTACCACTGTAGCAAGAGGG 59 17703786 17703974 GAGCATTGGTAAGCCTTAAGG 59 NA Drosophila melanogaster 61 CG31198 FBgn0051198 FBtr0084128 3 1 1 82 3R 17581770 17581789 ATCCGTATGATCAAGCACAC 58 17581829 17581911 GACTGATACTCGTATTTCTTCAGG 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 2 5 5 80 3R 17349340 17349360 TGTGTCATAGGCAATGAATGC 59 17349402 17349483 TCTCTTGTAGCGTGTTCCC 59 NA Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0083899 1 1 2 102 3R 16152109 16152127 TTACCAACCACCTCAAGAC 57 16151862 16152043 ATTGAGTGATCCACTGTGG 57 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083843,FBtr0083842 2 2 2 86 3R 15845001 15845020 GACTCGATCAATGTGGTCAG 58 15844873 15844953 ATTCAGTATGCACCAATGCG 59 NA Drosophila melanogaster 61 CG15025 FBgn0038709 FBtr0083768 1 1 1 115 3R 15316149 15316303 AATCTAAGCCTTCTGTATCCGT 59 15316055 15316073 TACTCTGGGATTCAAGGCC 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0110919,FBtr0083765,FBtr0110915 1 8 8 84 3R 15417026 15417385 CGATTGCATTCAGGTACCC 58 15417433 15417451 CAGACAGGATCTCACCGAG 59 NA Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 3 2 2 120 3R 15279980 15282853 CTAATGAGATCGGACCTGGA 58 15282936 15282954 AGAAGAACTTCACATCGCC 57 NA Drosophila melanogaster 61 CG14291 FBgn0038660 FBtr0083724 3 1 1 60 3R 14737688 14737707 GGCAGAACCAATCTCTACGA 59 14737647 14737669 TATTGGGAGAGCTAATGATCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637 3 1 5 93 3R 14403294 14412006 AAGAGGAGAACTGAGGTGG 58 14412061 14412081 TTCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 CG7126 FBgn0038602 FBtr0083593 2 1 1 92 3R 14128054 14128140 ATTGATAGAGCAACAGTTCTCG 58 14127983 14128004 AAGTCTATTTCCGAGTCATCCA 59 NA Drosophila melanogaster 61 CG7126 FBgn0038602 FBtr0083593 1 1 1 91 3R 14128054 14128140 ATTGATAGAGCAACAGTTCTCG 58 14127984 14128004 AGTCTATTTCCGAGTCATCCA 58 NA Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 2 2 2 169 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115416 14115492 ACCAATTCGTTCTCCTGCA 59 NA Drosophila melanogaster 61 CG31251 FBgn0051251 FBtr0083484 3 1 1 114 3R 13509955 13509973 CCAGAGACGATCATCCTCG 59 13509800 13509879 AGAGCTCCTTTGCTTTATCGT 59 NA Drosophila melanogaster 61 ald FBgn0000063 FBtr0083478 2 1 1 86 3R 13498506 13498527 CAGGGATATCTAAACGAAACCA 58 13498574 13498655 GCGCACAAGTTGATAATCG 57 NA Drosophila melanogaster 61 CG14329 FBgn0038525 FBtr0083463 3 1 1 77 3R 13435889 13435907 TACTACGATTCTGCGGGAG 58 13436019 13436038 GATTCCGTTTACTGTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14330 FBgn0038512 FBtr0083443 3 1 1 60 3R 13282269 13282288 CTCTTCTACGAGATACCGCC 59 13282228 13282247 TTTAGCATTTCCGACGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 1 2 2 102 3R 13224493 13224749 GTGATGAAGGCATCAAGCG 59 13224409 13224431 CTGTACAGATAAAGTTCCGTGAG 59 NA Drosophila melanogaster 61 CG3678 FBgn0038461 FBtr0083376 3 1 1 80 3R 12816556 12816637 ATACGATACACAATGGGTGG 57 12816495 12816513 ATGCGGATTAAGCTTCAGG 58 NA Nonspecific Drosophila melanogaster 61 CG31183 FBgn0051183 FBtr0083187 2 1 1 80 3R 11692276 11694902 GTCGAGAATTGTCATAATGTGC 58 11692217 11692237 TCGATCATATTCAACTCCTCG 57 NA Drosophila melanogaster 61 CG31150 FBgn0051150 FBtr0083189 1 1 1 80 3R 11674911 11674930 GGGTTTGATCACGAAGACAG 59 11674727 11674871 AATAGTTGAACCACATCGTTCC 59 NA Drosophila melanogaster 61 CG4576 FBgn0038366 FBtr0083180 1 1 1 83 3R 11651889 11652830 TTCAATTGAACATGACGCAG 57 11652876 11652894 CATTCAATTCCTGGAGGCA 57 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 2 3 3 92 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191418 11191500 CCAGATTAATTTGCTCGTTGC 58 NA Drosophila melanogaster 61 CG4334 FBgn0038312 FBtr0290018 2 1 1 104 3R 11095232 11095250 CAATCCATGACAGGCACTC 58 11095315 11095467 AAACAGAACCTTTGTGGAAGAG 59 NA Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 2 2 2 60 3R 11093388 11093406 ATAATTCCAAAGGCAGCCC 58 11093346 11093364 AAAGCTGGACAAGTGAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 3 2 2 93 3R 11092082 11092163 GTGCCCTTAAGTCTTTCCTG 58 11092219 11092237 CCAATGGAAACGATCAGGC 59 NA Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 1 2 2 80 3R 11029203 11029284 GGAACTTAATCCTATCCTTGCC 58 11029144 11029163 GAGGTCAGATCATCGAAGGT 59 NA Drosophila melanogaster 61 Orc2 FBgn0015270 FBtr0082866 1 1 1 134 3R 9791293 9791379 CGTCAAGAAGCAGATTGCC 59 9791477 9791495 TTGTCAGAGGAGTTGCCAG 59 NA Drosophila melanogaster 61 Rbp4 FBgn0010258 FBtr0082853 2 1 1 81 3R 9480564 9480583 TTCAAGCCAGCTAAATCTCC 58 9480415 9480521 CTTAGATACCGTAGGGTGGT 58 NA Drosophila melanogaster 61 CG9759 FBgn0038160 FBtr0082861 2 1 1 71 3R 9434792 9434810 TCTGGCGGATGTAAATCAG 57 9434739 9434757 AATCCAAATTGTCTGGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14370 FBgn0038158 FBtr0082788 1 1 1 60 3R 9413937 9413955 TGTTCTACCGACTGATGCT 58 9413978 9413997 TAAACGTACACCGCATACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yellow-e FBgn0041711 FBtr0082757 1 1 1 60 3R 9236529 9236547 GGTGTGGTTTACTTCCAGC 58 9236110 9236129 GGACATTCTTATGCACGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8784 FBgn0038140 FBtr0082745 2 1 1 80 3R 9168242 9169317 CAGAATGTTGGTAGCTGTAGC 59 9169359 9169377 CCGTAAACTGCCATCAGTC 58 NA Drosophila melanogaster 61 CG31157 FBgn0051157 FBtr0113394 1 1 1 80 3R 8873581 8873600 TTCCTGTGGAATCTCTACCG 59 8873640 8873739 TTATCAAAGGTAACAGACCAGC 58 NA Drosophila melanogaster 61 Arp87C FBgn0011745 FBtr0082652 2 1 1 85 3R 8519472 8519558 CTCAAGATCAGGATCGCTG 57 8519607 8519625 TTGAAAGTATCGAGCGAGG 57 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630 3 1 5 200 3R 8269847 8270527 TGGTGTAATCCAGTTGATGC 58 8270690 8270708 TCACGGTGATGTCCTTGAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082547 3 1 2 92 3R 7989273 7989357 TTCCAGAAACTACGGAACC 57 7989199 7989219 CAGCAGTAACGATTTCAACAG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 Tango9 FBgn0260744 FBtr0082508 2 1 1 80 3R 7799940 7800041 TCGTCGTGGAGTTATATCCG 59 7799879 7799898 GGCAATAGCATGCTAACAGG 59 NA Drosophila melanogaster 61 CG6723 FBgn0037895 FBtr0082405 2 1 1 100 3R 7242616 7242697 AATGGAAATAGCGCTTTGGT 58 7242535 7242553 TAGGTAATGGCTCCTGAGG 57 NA Drosophila melanogaster 61 CG6719 FBgn0037893 FBtr0082406 2 1 1 114 3R 7235012 7235030 GGAGTATCCGCTAGACGAG 58 7234855 7234936 AGTTGTGATTTGATCCCTCAG 58 NA Drosophila melanogaster 61 scpr-C FBgn0037879 FBtr0082351 3 1 1 78 3R 7051999 7052017 GCAAGAACCGTTATGGAGC 59 7052059 7052077 ATGACCTTCTCGTTGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tctp FBgn0037874 FBtr0082344 3 1 1 60 3R 7036179 7036198 TGATCTACGAGGTGTACGGA 59 7036221 7036239 CCCTCCAGCTTGATATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 2 1 1 62 3R 6995716 6995737 TTCAGAGATGTGTTTATCCCAG 58 6995603 6995696 GCTCAGTTCGTTTATCAATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082277 3 1 4 91 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6610636 6611134 AGGAGTTATCCTGTAGCGTC 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082308 1 1 4 92 3R 6599734 6602910 TACGCAGTTACGACTCCAC 59 6599660 6599680 CTTCGAGGTGTACGAGTAGTC 59 NA Drosophila melanogaster 61 Skeletor FBgn0020517 FBtr0091656 1 1 1 100 3R 6519561 6519709 GAAACCAAGATGGCATCCG 59 6519773 6519791 ATTCGGAATCGGGTTCTGG 59 NA Nonspecific Drosophila melanogaster 61 CG6465 FBgn0037818 FBtr0082323 1 1 1 89 3R 6501687 6501705 GAAGCAACCTAAAGTCCCG 58 6501558 6501635 GATATGTGCATCTCATCGGT 57 NA Drosophila melanogaster 61 Bruce FBgn0037808 FBtr0082239 1 1 1 80 3R 6143790 6143875 TCTGAGGCTGTACAAACCC 59 6143728 6143748 TTTCCGAAGATTGTCTGACCA 59 NA Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 1 1 1 68 3R 6133008 6133026 CAGTCGTAGTGGTGAAGGG 59 6133058 6133231 AAGATGCAGAAGCCATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3996 FBgn0037800 FBtr0082224 2 1 1 80 3R 6066596 6066614 GACCTGGTCCTTATCGAGG 59 6066656 6067271 GATCACACGTTCTTCTAGCAG 58 NA Drosophila melanogaster 61 CG12420 FBgn0037797 FBtr0082222 3 1 1 114 3R 6048762 6048849 GGAAACAGTCAAGTTCTAAGTCTG 59 6048922 6048940 AACCATAGCCACTCCAGTG 59 NA Drosophila melanogaster 61 CG33783 FBgn0053783 FBtr0091784 3 1 1 89 3R 5892632 5892650 ATTAAAGGTCCTGGGTCGC 59 5892701 5892899 GATAGAATGCACGTCGAACTG 59 NA Drosophila melanogaster 61 Npc2d FBgn0037782 FBtr0082202 2 1 1 86 3R 5881766 5881785 TGGTTCTGATCTCCCTAGGA 59 5881632 5881719 TTCCGGAACATTTCTTCACAG 58 NA Drosophila melanogaster 61 eca FBgn0069242 FBtr0082098 3 1 1 82 3R 5511015 5511033 CCACATATCGGAGACGGAG 59 5510889 5510975 GCTCTACCTTGTAGTTAACAATCAC 59 NA Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301245 2 1 2 76 3R 4635488 4635508 CAAGATGTGGTCCTCTAAGAC 57 4635370 4635450 AAGTGAAACCGCATGATGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9797 FBgn0037621 FBtr0081947 2 1 1 126 3R 4556329 4556404 AATTTGGCTGCGAACTCTG 59 4556221 4556239 GTGTAGTCTGTGAAGCAGC 58 NA Drosophila melanogaster 61 CG31462 FBgn0051462 FBtr0081851 1 1 1 60 3R 4213518 4213540 GTTAGCCTTAAGACTAGATCCGT 59 4213480 4213498 TGTCTCCCATCTGATTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11694 FBgn0037571 FBtr0081859 3 1 1 78 3R 4137416 4137434 GATTGTCGAGCAACTGGAG 58 4137356 4137374 GGTGGTCTGTAACAAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpA-70 FBgn0010173 FBtr0081867 1 1 1 97 3R 4088545 4088563 AGAAGGTTGTCGATGAGGG 59 4088387 4088486 GATGCTCATGTTGATCAGCAG 59 NA Drosophila melanogaster 61 puc FBgn0243512 FBtr0081792 3 1 1 83 3R 3936949 3936967 ACATGCAAATACCTGCCAG 58 3937012 3946242 GTGCATCTTCGATAAAGTCGT 58 NA Drosophila melanogaster 61 CG18746 FBgn0042103 FBtr0081775 2 1 1 80 3R 3615501 3615519 TCATTCAACGGACATGTGG 58 3615376 3615460 CTCAATAAGCACCTCTATGCTG 59 NA Drosophila melanogaster 61 MstProx FBgn0015770 FBtr0081585 3 1 1 94 3R 3194381 3194399 TTACCAATTGCACGGTTCG 59 3194200 3194219 TAAATCCACCTCGTTGTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 1 6 11 80 3R 2724256 2734248 TGGTAAGTGTCAAGAACGC 58 2724194 2724214 AAGTGAAACTCCTTCTCTAGC 57 NA Drosophila melanogaster 61 sowi FBgn0037460 FBtr0081701 3 1 1 80 3R 2452858 2452966 GAACTTAAGGCGGATATGACC 58 2452798 2452820 ATAGTCCTCGTAGGAAATGACTC 59 NA Drosophila melanogaster 61 dpr11 FBgn0053202 FBtr0081704 2 1 1 101 3R 2357494 2357676 TAATAAATGGCGAATCGTCGG 59 2357413 2357431 TGAGGATGACGCTAAGCAG 59 NA Drosophila melanogaster 61 snRNP2 FBgn0037434 FBtr0081737 3 1 1 129 3R 2171354 2171509 TAGTTATAATCCGCTATGGCTC 57 2171246 2171264 TGTTGTTCTTCACGGACTG 58 NA InUTR Drosophila melanogaster 61 Osi20 FBgn0037430 FBtr0081708 2 1 1 167 3R 2166285 2166303 TTTGATCTGGAGTTGCCCA 59 2166498 2166518 AATCTTGGACAGAATCAGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31560 FBgn0051560 FBtr0078609 2 1 1 60 3R 2135940 2135959 GTCAATCAAATCGGAACAGG 57 2135980 2136000 AATAGTGGTAGCAGAATCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600,FBtr0078601 2 2 2 157 3R 2092756 2092839 CATATCATTGCTGGGCAGTC 59 2092959 2092977 CTACCTGATCCAACTGCGA 59 NA Drosophila melanogaster 61 Obp83g FBgn0046875 FBtr0078617 3 1 1 173 3R 1937951 1937969 AATGCAGTCCCAATCCCTC 59 1937733 1937753 TCGTAGTTCAGGTACTTCTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0273439 2 1 2 102 3R 1883076 1883096 CTTGAACCTATACAGCGAACG 59 1882589 1883012 ACTGAGCCAGCTCTTTACG 59 NA Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 2 2 2 81 3R 1651096 1651114 TGAAGATGCTCATTCGCAG 58 1651159 1651231 GTAGCGATTCATGCGATCC 59 NA Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 1 1 1 115 3R 1631990 1632738 AAGCAAATGTTCTGGAACCG 59 1632816 1632834 TTTACCAGGATCTTGCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 2 1 1 98 3R 1560060 1560078 CCTTCAGACGCATGTACCT 59 1560140 1560227 GTTCCGATAGCTTCTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 elm FBgn0037358 FBtr0078732 2 1 1 158 3R 1480380 1480398 AAATCCAGGAGGAGACTGG 58 1479339 1479357 AATGAACTATCCGCTCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1172 FBgn0037321 FBtr0078792 2 1 1 80 3R 1220387 1220406 GGGTCTTGACTTTCAGATGG 58 1220447 1221262 TAGCATTCTGTAAGGTAGCCA 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 Tim17a2 FBgn0037307 FBtr0078820 1 1 1 60 3R 1084816 1084834 ATTGTAGAGGATTGCGGGT 58 1084774 1084792 ACTGAAACAACGATCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078828 2 1 3 93 3R 1048901 1048980 GCGATACAGTGATATCGCA 57 1048826 1048845 TAATCACATCCAGTCGATCG 57 NA InUTR Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0299709,FBtr0300525 3 3 3 83 3R 1028995 1029013 TACGCTCAGTGATACAGCA 58 1028865 1028948 CATGGAAGAGCAGGTTCTC 57 NA Drosophila melanogaster 61 atms FBgn0010750 FBtr0078868 3 1 1 117 3R 602418 602436 CTTCTTCGTGATGCGTCAG 59 602517 602594 CTTGACAACCAGCTTGGTG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 abs FBgn0015331 FBtr0078967 2 1 1 60 3R 60072 60093 GTTGAGTACGTTAAGCAAGAGG 59 60114 60132 CGGTCTTCTGTAGGCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DhpD FBgn0261436 FBtr0078986 2 1 1 88 3R 53928 53949 AAGAGATCGAGATGGTAAAGGG 59 53806 53884 CAGTACAGTCTTATTCGTTAGCAG 59 NA Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0111206 3 1 2 78 3R 40846 40864 AGTGTCTCTGGCGTAACAC 59 31449 31468 AATAAAGGATTGCCATCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0078988 3 1 2 109 3R 31499 40877 TTAAAGAAATCGTCCGCCA 57 31408 31427 CGCGATAAGGATATACAGCT 57 NA InUTR Drosophila melanogaster 61 snoRNA:Psi28S-1837b FBgn0082995 FBtr0113608 1 1 1 60 3L 5757301 5757321 AACTCTGACACAGATCAGCTC 59 5757261 5757282 TCAGTTCACGAAATTGACACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32477 FBgn0052477 FBtr0072500 3 1 1 86 3L 227445 227521 AGCGTTTGAGAAATGACGC 59 227568 227589 GTGATTGATAAGACTGGTTGCT 58 NA Drosophila melanogaster 61 CG12546 FBgn0037178 FBtr0078541 1 1 1 60 3L 22686848 22686867 TTCTTTCCGTCCTAGGATGC 59 22686807 22686827 GATGTAGATGTGCTGCTACTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33771 FBgn0053771 FBtr0290251 1 1 1 62 3L 22642542 22642560 AAACCGAAATTGTCGTCGG 59 22642627 22642645 TGTTGCCGGTAACAAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11449 FBgn0037162 FBtr0078503 2 1 1 61 3L 22447616 22447634 ATCTTTCGGGTCCTTCAGG 59 22447659 22447677 GTTGCTTCTGGTCATAGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14573 FBgn0037125 FBtr0078433 1 1 1 72 3L 21727737 21727755 TTACTATGTGGGTGCCCAG 59 21727791 21727809 CTACCAGCCTAGTTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14568 FBgn0037124 FBtr0078455 3 1 1 71 3L 21726526 21726544 CAAGTTCATCTGCTCCCTG 58 21726473 21726491 CGGAATCTGGTAGGCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7634 FBgn0037101 FBtr0078371 1 1 1 81 3L 21560276 21560347 AAATCACGTCTAATGGGAAACC 59 21560386 21560407 GGTGAAGTAGGTAGGACTTCTC 59 NA Drosophila melanogaster 61 Cpr78Ca FBgn0037067 FBtr0078409 2 1 1 91 3L 21285679 21285762 GTCGTTCGGCAAGATTGTG 59 21285606 21285624 TGGTCCTGTCCAAAGATGG 59 NA Drosophila melanogaster 61 CG9389 FBgn0037064 FBtr0078415 1 1 1 86 3L 21262575 21262593 GATATCGTCACTCCCACCG 59 21262429 21262528 GGCAATAAATTGGTGATTGGGA 59 NA Drosophila melanogaster 61 CG3680 FBgn0037027 FBtr0078256 2 1 1 80 3L 20805706 20805724 AGGCCAGAAATGTCAACGA 59 20805765 20805841 TTAGTGTACGATACATCTCCGC 59 NA Drosophila melanogaster 61 CG11399 FBgn0037021 FBtr0078277 2 1 1 105 3L 20775762 20775781 GTTCCTTCCAAGTAAACCCT 57 20775611 20775695 ACAATAAAGCTCAGAGGCTC 57 NA Drosophila melanogaster 61 CG13250 FBgn0037013 FBtr0078211 2 1 1 87 3L 20527557 20527575 AAAGCCGAATCCTGAATGC 58 20527625 20528287 TAGTTGACATTCGCCAGGAG 59 NA Drosophila melanogaster 61 Rcd2 FBgn0037012 FBtr0078213 1 1 1 80 3L 20522849 20532009 TACAATCGTGTGCTATGCC 58 20522787 20522806 GAAAGTCATTCTCACACGGT 58 NA Drosophila melanogaster 61 CG17637 FBgn0037004 FBtr0078207 2 1 1 60 3L 20497955 20497974 GATGACATAAGCCCAAAGGA 57 20497995 20498015 CAACATTCACCTTTCCTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 1 2 2 81 3L 20385586 20385755 AGTCCATGTTGAAAGTGGC 58 20385523 20385544 CTGGTCATCTTTCAATTTCAGG 57 NA Drosophila melanogaster 61 Grasp65 FBgn0036919 FBtr0074895 3 1 1 73 3L 19918206 19918660 GGCTACCACGTACTCAAGG 59 19918697 19918715 ATGAAGTCGAAGAAGGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 1 2 2 80 3L 19904553 19904574 AAGATAAGCATACGCCAAACAG 59 19904615 19904687 TTTCAAGGGCTCATTTGGC 59 NA Drosophila melanogaster 61 Cyp305a1 FBgn0036910 FBtr0074925 3 1 1 119 3L 19806260 19806279 CGCGATTCTAATTGGTTTCG 58 19805024 19805279 TCCTTACGGAACTGTAATGTG 57 NA Drosophila melanogaster 61 CG14089 FBgn0036861 FBtr0075015 1 1 1 60 3L 19273768 19273786 ACCCTCCAAACTGGAAGTC 59 19273726 19273748 GATCCTCCTCTATGATCACTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 1 2 2 291 3L 19103337 19103355 GAGATTCAACCACCTGCAC 58 19101362 19101380 GTTCAGACTCAGGTTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11619 FBgn0036836 FBtr0075046 2 1 1 60 3L 18979530 18979552 GGATGAGTATATGGATCTGAGGG 59 18979492 18979511 GGACTGAACGAAGTTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 2 3 3 89 3L 18872673 18872691 ATAGTGCCCGAGAAGATCG 59 18872552 18872622 AATGCAGCTCTTTAAGCTCTC 58 NA Drosophila melanogaster 61 CG6885 FBgn0036810 FBtr0075053 3 1 1 60 3L 18738246 18738267 CAACAGAAGTCATTGGAAATGG 58 18738285 18738306 TCAGAAAGTTGTGCTAAATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42495 FBgn0260027 FBtr0300582 1 1 1 80 3L 18660886 18660959 TCTTATCGTTTGTCCTAGGTG 57 18660999 18661019 CCAGAATGAGAGTTATTCCGA 57 NA Drosophila melanogaster 61 bora FBgn0259791 FBtr0075108 3 1 1 94 3L 18616142 18616160 TTACACCTGCCACTGATCG 59 18616276 18616294 GAGACCTCGTCAATGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242,FBtr0089387 3 2 2 94 3L 18480882 18480900 CAGGAAACTTCACACCGTG 59 18480593 18480824 CACTTATGACCGTGAGCAC 58 NA Drosophila melanogaster 61 CG32191 FBgn0052191 FBtr0075168 3 1 1 97 3L 17800863 17800952 GAAATATGCAGCGATGATCTC 57 17800786 17800807 AGATCACTATGCTATTCTCCAG 57 NA Drosophila melanogaster 61 CheB74a FBgn0261294 FBtr0091928 3 1 1 147 3L 17712630 17712650 CGGTACTAAATATGGTGTGCA 58 17712450 17712522 TCCACGAAGTAAACAGTTCC 57 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185,FBtr0075186 3 2 2 98 3L 17722960 17723293 CCCACAGGATACGAAAGGG 59 17723355 17723373 GTCGATACAGCTTTCGGGA 59 NA Drosophila melanogaster 61 CG7630 FBgn0040793 FBtr0075217 2 1 1 138 3L 17419056 17419074 CTCCACCATGAACGATCTG 58 17419174 17419253 ACCAGAAGATTTCACGAATCC 58 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 2 4 4 80 3L 17008138 17008157 ATACCTTCAAGACCAAGTGC 57 17007995 17008097 CTTTGGCTTGAATGATGACTG 57 NA Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 3 3 4 81 3L 16376955 16377037 GCTTTACTCCCAACTTATCTTCG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 retinin FBgn0040074 FBtr0075375 3 1 1 93 3L 16325084 16325161 CTAGATTGTTCCTGCCCGT 59 16325218 16325236 AGAGCCACAAGATTCGAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34247 FBgn0085276 FBtr0112441 1 1 1 83 3L 16254589 16254675 TGAAGCTGCTGATCTTTGC 58 16254524 16254542 GGTAGTACCCATAGCTGGG 58 NA Drosophila melanogaster 61 CG42538 FBgn0260646 FBtr0301002 2 1 1 183 3L 16027694 16027772 GTCGTCCAGTCTTTCAGCT 59 16027918 16027937 TTGCAATCTTCCACTTTGCA 59 NA Drosophila melanogaster 61 Eig71Eh FBgn0014848 FBtr0075583 1 1 1 80 3L 15652218 15652306 CGATAGCTTCTCCGAATCGA 59 15652157 15652176 GAGGTCTTGGAGTCACTCTG 59 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565,FBtr0075566 3 2 2 81 3L 15577958 15578030 CTGGAAGAACTGCGAACAC 59 15578074 15578093 GCGAATGATGTTCACCTCTC 59 NA Drosophila melanogaster 61 obst-H FBgn0053983 FBtr0100028 1 1 1 83 3L 15521824 15521843 TGCACTGTGATAATGAGCTG 58 15521696 15521778 GATCTTCGAAGGCACACTG 58 NA Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075687 3 1 2 60 3L 14698946 14698964 GATCTCCAAGGCGTTTCTC 58 14698985 14699006 GTCATTCAGAACTTCTGTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7906 FBgn0036417 FBtr0075741 3 1 1 110 3L 14230987 14231005 CAGTGTCCCAAAGCATCAC 59 14231078 14231159 AACATTCTTGGTGTTGAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 1 3 3 112 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033094 14033177 GGCTTGTTAAAGACCTGCTC 59 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075763 2 1 3 165 3L 13968924 13968942 CCGCCCGTATATGTTAGCT 59 13969138 13969157 GATAGAAGCTCTTCCGTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32132 FBgn0052132 FBtr0075800 1 1 1 60 3L 13865641 13865660 AACAGCCAGTATGGTAGCAG 59 13865600 13865618 GATGCGTATGCTGATGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 3 2 2 80 3L 13437179 13437325 TTGTAGAGACGAACAACATGG 58 13437367 13437385 CCAAGCTGGTCGAATTGAC 59 NA Drosophila melanogaster 61 CG17672 FBgn0083978 FBtr0110982 3 1 1 82 3L 13028858 13029025 GAAGTGTGCGAATCCTCTG 58 13029071 13029089 GGAATGACCAGGAACAGGT 59 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075921 2 1 3 81 3L 12743767 12743786 AACTCAAACACGCCAATGTC 59 12743830 12743910 GTGACTGAACTGTCGACGA 59 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 2 2 3 102 3L 12743830 12744415 TCGTCGACAGATTCATCCC 59 12744481 12744499 CCAGGACCTCTTGCTTCTC 59 NA Drosophila melanogaster 61 snRNP69D FBgn0016940 FBtr0075952 3 1 1 122 3L 12727061 12727603 GATTCCTTATGAAGCTAAGTCACG 59 12726962 12726980 TCATCCGAACGCTCTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 2 2 3 81 3L 12493241 12493324 CCTAAGATACTTGATCGATATTGGC 59 12493184 12493208 TATATCCAGATTCTCTACGAGATGG 59 NA Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 2 2 2 140 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458138 12458156 GTTCTCGTATCTCCCAGGC 59 NA Drosophila melanogaster 61 prc FBgn0028573 FBtr0076064 3 1 1 82 3L 11953419 11953437 CAGGTTGCTACTTACAGGG 57 11952985 11953373 TCAGTAACAGCATTTGCGT 58 NA Drosophila melanogaster 61 CG5964 FBgn0036206 FBtr0076085 2 1 1 84 3L 11784920 11784939 AACTATGAGCAGGAGATCGA 58 11784790 11784808 TCTCTACGACGGACAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 2 2 2 80 3L 11195966 11196053 TAGACTTGGAAGAGACAAACC 57 11195906 11195924 GAAACTGGTCGAAGAAGGG 58 NA Drosophila melanogaster 61 CG6272 FBgn0036126 FBtr0076234 3 1 1 109 3L 11090963 11091108 AACAATGAGGCTGTTCAGC 58 11090872 11090892 ATCTGAACCTTAAGAGCATCG 58 NA Drosophila melanogaster 61 CG32069 FBgn0052069 FBtr0076241 2 1 1 118 3L 11055607 11055629 GACACTGATTGAATCTTCACTCC 59 11055445 11055463 TAGGTGCTCCAAAGTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 klu FBgn0013469 FBtr0076247 2 1 1 202 3L 10978168 10989342 CGTCTAAATCAAAGAGTCCCA 57 10977986 10978004 CTTCTGCCATCGTCATGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 2 2 2 159 3L 10877957 10877978 GCGTGCAGTAACTTTATATCGT 59 10877745 10877837 TCATGTTGTCCCAGGACTC 59 NA Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 3 1 1 74 3L 10872397 10872469 AGACTTTGTTGGCTTCGGT 59 10872503 10872525 TGAAACCTAGTATAGAGCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42521 FBgn0260396 FBtr0300668 3 1 1 91 3L 10616546 10616618 TTACACAAAGGCCAAGCTG 58 10616473 10616494 TTAGCAAAGGAGCTTACATGTC 58 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420,FBtr0113418 2 2 5 100 3L 10580773 10580946 AATCTACGCTTCCAGGCAG 59 10582469 10582487 GACAGCGGAGTCTTTAGCA 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491,FBtr0301773,FBtr0089490,FBtr0089492,FBtr0300290 2 5 6 115 3L 9336132 9336151 CGATAATCGGGACAAGTGGA 59 9336229 9338017 GATCTTCGTGTTTGGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4942 FBgn0035960 FBtr0076524 3 1 1 167 3L 9066617 9066636 CTCTGACCATTTACCAGCAC 58 9066766 9066841 ACTGCTTCTTGATCGAACG 58 NA Drosophila melanogaster 61 CG5087 FBgn0035953 FBtr0076520 2 1 1 80 3L 8992686 8992761 CACTACTGACTGAAACCACC 58 8992803 8992822 GCCACTGAGTAAATACTCCC 57 NA Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 1 2 2 80 3L 8966607 8966627 CGTATTTGGATGTTAAGCAGC 58 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 CG6745 FBgn0035901 FBtr0076620 1 1 1 86 3L 8504068 8504086 TTACGTGACCTTCCTGGTG 59 8504135 8504213 GATGGTCGTAAGTTCAGTCG 58 NA Drosophila melanogaster 61 exo70 FBgn0035892 FBtr0076612 3 1 1 80 3L 8408752 8408829 CTACGAAATTTACTCTGGAGTGC 59 8408869 8408887 ATAGCGTTGATCTCGTGCT 59 NA Drosophila melanogaster 61 CG7120 FBgn0035888 FBtr0300279 3 1 1 86 3L 8393712 8393731 AATCTTATCAGAGCCATGCC 57 8393778 8393857 GTCGTCCACCTTATTATAGCC 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 3 5 5 195 3L 8349036 8349117 TACTGCCTATAGAAGCTCGC 59 8348860 8348878 GAACTGGATATGCTCGCAG 58 NA Drosophila melanogaster 61 CG7182 FBgn0035878 FBtr0076677 3 1 1 60 3L 8338728 8338746 GCCCATCAATATCACACGG 58 8338686 8338704 AGCTGGGTATGGATAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13675 FBgn0035845 FBtr0300119 2 1 1 116 3L 8154635 8157327 TCAATGGGCAAATCGATGG 58 8154537 8154555 CTGTGTCCGCATAGTAACC 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 2 2 4 81 3L 7928507 7928526 TGAAACTGTCTACGGTACCG 59 7926323 7926877 CAGTTGTTGGACGATGCTG 59 NA Drosophila melanogaster 61 CG32379 FBgn0052379 FBtr0273419 2 1 1 80 3L 7390282 7390918 GGGTTATACAAGCGACTTTCC 59 7390959 7390978 GAGTAAATGATCGCCTTGGC 59 NA Drosophila melanogaster 61 sec63 FBgn0035771 FBtr0076847 2 1 1 86 3L 7356793 7356811 AGAAGGAGGAGATCCAGCT 59 7356860 7356961 AATACGAGTCCGATCTCAGG 58 NA Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833,FBtr0113151 2 2 2 60 3L 7227963 7227981 CGGAATTCATGGGACATCG 58 7228003 7228023 TTCAAAGACCCACTATTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8549 FBgn0035714 FBtr0076943 3 1 1 60 3L 6746313 6746331 AGGTTCTTTCGTGGAGGAG 59 6746435 6746453 GTATGGGTTTGCAGGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8519 FBgn0035711 FBtr0076942 1 1 1 80 3L 6701570 6701648 ATGTCCCAAGGCTGAAGAC 59 6701690 6701710 ATCGAGTAGACCAGCAATAGG 59 NA Drosophila melanogaster 61 CG8270 FBgn0035703 FBtr0076967 1 1 1 80 3L 6482448 6482467 AAGGAAACTCCCTGATTCCG 59 6482510 6482584 GACTTGGATTGCCCAAGTC 58 NA Drosophila melanogaster 61 CG10147 FBgn0035702 FBtr0076987 3 1 1 92 3L 6480890 6480968 GAAAGCTTTGGAAGAGCCG 59 6480816 6480835 TTCTTGTGCAGAATCAAGCG 59 NA Drosophila melanogaster 61 BG642312 FBgn0047334 FBtr0091954 1 1 1 80 3L 6225865 6225947 AGTTATCTGCGTGATCGGT 58 6225803 6225822 TGTCGATATCGATCCTCGAG 58 NA Drosophila melanogaster 61 CG10467 FBgn0035679 FBtr0077063 3 1 1 60 3L 6086846 6086866 TTATGGAATCACTGAGACGGA 58 6086806 6086824 CTCTACGGGTGTGATACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299610 2 1 2 80 3L 6062984 6063332 ACATATTGGTTCTCGAGTACG 57 6063373 6063392 CTCCAGTGAAGAAGATAGCG 57 NA Drosophila melanogaster 61 CG32409 FBgn0052409 FBtr0077030 3 1 1 117 3L 5893149 5893224 ACCATGGATAAATGGGTGC 57 5893305 5893323 TCTTCTGGAACATGTCCGT 58 NA Drosophila melanogaster 61 CG13705 FBgn0035582 FBtr0073352 3 1 1 101 3L 4896883 4896902 TCTAGCAGACATCGTCTTGG 59 4897037 4897055 GTAATCCGTGGCAATGGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tie FBgn0014073 FBtr0073323 1 1 1 86 3L 4512233 4512251 GCAGTACCACATGTTCACC 58 4511534 4512183 TACGGTGTTGATCCCAGAG 58 NA Drosophila melanogaster 61 CG1316 FBgn0035526 FBtr0073233 3 1 1 99 3L 4284964 4284984 TGGATTACTGCCAAATCATGC 59 4285104 4285183 AGTTTGTCCTTGGCATAAATGG 59 NA Drosophila melanogaster 61 CG1295 FBgn0035509 FBtr0073222 3 1 1 110 3L 4204700 4204718 CAATCGAGTGCTTCCTGTG 58 4204792 4205236 AGAGGCTTCACTCTGTTGG 59 NA Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073197,FBtr0073198 3 2 2 98 3L 4032378 4032469 GTATACCATGGGCTCTTTGAG 58 4032529 4032547 GTTTCCCGGATGATATGGG 57 NA Nonspecific Drosophila melanogaster 61 CG12009 FBgn0035430 FBtr0073053 3 1 1 119 3L 3296210 3296228 CGACTGCCAGATCTTTCAC 58 3296311 3296388 CAGGTGAACGATTCCTGAC 58 NA Drosophila melanogaster 61 ckd FBgn0035427 FBtr0073050 1 1 1 80 3L 3267479 3267498 GAGACGAGCTTTAACCAGGA 59 3267539 3267620 GTAGAACCATTTGGGTGACTC 58 NA Drosophila melanogaster 61 CG12034 FBgn0035421 FBtr0073043 3 1 1 107 3L 3219318 3219336 GCTGAACATTCTGACCCTG 59 3219492 3219511 ATGTCATACTTCCCGCTAGC 60 NA DesignNoJunction Drosophila melanogaster 61 CG12034 FBgn0035421 FBtr0073043 2 1 1 107 3L 3219317 3219335 AGCTGAACATTCTGACCCT 59 3219492 3219510 TGTCATACTTCCCGCTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 1 5 5 84 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131028 3131121 GTTGAGAGTCGATATTATGGGC 58 NA Drosophila melanogaster 61 mRpS35 FBgn0035374 FBtr0301626 3 1 1 196 3L 2780944 2780962 AAAGCCGCATAAATCGCTG 59 2781119 2781203 ACTCGGAATTCTTCATCATCCT 59 NA InUTR Drosophila melanogaster 61 CG32305 FBgn0052305 FBtr0301322 2 1 1 80 3L 2251875 2251893 CTTCTCCATCGACATTCCG 58 2251937 2252011 AAATGGACAGTCAGAACGC 59 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717,FBtr0300715,FBtr0300714 1 4 4 116 3L 1877653 1877771 CACATTATCTGGTGCAATGTC 57 1877557 1877577 GTTGAGAAGGATCTTCTTGGT 57 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 2 2 5 86 3L 1656737 1656755 TGAAGTCTGGTATAGCGGC 59 1655700 1656687 CGACTAGAGGTTCGCTACC 59 NA Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 1 2 2 80 3L 1603334 1603355 GTAGAGAAACAAATAGACTCGC 57 1603396 1603472 CGTTGTGGTTCCTATCGAG 58 NA Nonspecific Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 2 2 2 82 3L 1314022 1314040 AAAGAGCTCTATTGCTGGG 57 1314086 1314171 CTAGGTGTGAGGATCTGCT 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 2 3 3 60 3L 1255001 1255021 CCATGAAGGGTGTCAATTTGG 59 1255042 1255504 CAGGTCTTGTAGCAAACCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12038 FBgn0035179 FBtr0072619 2 1 1 112 3L 994203 994289 ACTTGATGTGCCAGAAATTCG 59 994360 994381 TTTCATATCATTCAGCGGACAC 59 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 2 2 2 72 3L 897908 897926 AGGAATGGCCTACGTACAC 59 897961 898035 ATAAGTGTCATCATCGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32479 FBgn0052479 FBtr0072589 2 1 1 80 3L 890163 890553 CTGTGAACGCCATGATGTC 59 890596 890615 TGTTAAGGTTGTTCAGACGC 58 NA Drosophila melanogaster 61 CG17180 FBgn0035140 FBtr0072550 2 1 1 90 3L 541881 541899 AGTGCCAGTACCAATTGCT 59 541953 542028 TTGATCTGCCTTATGCGCT 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 1 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 Mkp FBgn0083992 FBtr0110976,FBtr0110977 1 2 2 60 3L 183040 183060 TTCTGAGCGACTTTCTCTACC 59 183000 183019 TTTATGATGTTATCCGCGCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1153 FBgn0083006 FBtr0113500 1 1 1 66 2R 9445129 9445149 CCACAGTTATGCAATAAACGC 58 9445083 9445102 GCAGATGTTAGTCAACACGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:MeU6-C68 FBgn0086021 FBtr0114297 1 1 1 60 2R 4053492 4053510 CTTTGCGGAGCTAAGAGGA 59 4053534 4053552 GAATCAGCTTGCATCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33356 FBgn0053356 FBtr0086348 3 1 1 74 2R 15652639 15652658 ATACCACGCTGAATACATCG 58 15652584 15652602 TATTAAACGCGTACGAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 3 1 1 66 2R 7754825 7754844 AATATGGCCTTACCAGGGAC 59 7754873 7754966 AAGCTTCGTACGACCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp6a15Psi FBgn0033303 FBtr0088689 2 1 1 117 2R 4457166 4457189 CGGAGATCTAGAATCAAATAAGGG 58 4457264 4457397 CAACGATGAGCAGACAAGAC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0302575,FBtr0072399,FBtr0100467,FBtr0100466 2 8 8 80 2R 20879486 20879566 AAATGGATAAGCTGAATAGCCG 59 20879427 20879447 TCTTCTCCTTCTGCAATTCCT 59 NA Drosophila melanogaster 61 Phk-3 FBgn0035089 FBtr0072404 1 1 1 126 2R 20858831 20859308 CCGGAAGAGAAATAATCCTCC 58 20858725 20858743 CATCCACGTTGACACTGTC 58 NA InUTR Drosophila melanogaster 61 RpL41 FBgn0066084 FBtr0100231 2 1 1 80 2R 20791306 20791417 AAATGAGAGCTAAGTGGCGT 59 20791245 20791263 CTTACTTGGACCTTGCACG 58 NA InUTR Drosophila melanogaster 61 key FBgn0041205 FBtr0072428 3 1 1 80 2R 20673807 20673827 GTATCTGAGAAACAGTCCCTG 57 20673604 20673768 GAACTCAAACGAGTGATTTAGC 58 NA Drosophila melanogaster 61 CG3663 FBgn0035044 FBtr0072323 3 1 1 86 2R 20549507 20549582 TATATGGCCTCGAGTCCCA 59 20549631 20549650 AGTCCGCCACTATGTATACG 59 NA Drosophila melanogaster 61 CG3640 FBgn0035042 FBtr0072322 2 1 1 131 2R 20527282 20527301 TACTCCTGGGATTATTGCCA 58 20527470 20527488 CTGCAACTGATTGCTGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 3 3 3 80 2R 20398305 20398386 TATTCGTAAGGTGTTGGAATCC 58 20398246 20398264 AGCAGACTGATGAGTTCCT 58 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273,FBtr0301274 1 2 2 80 2R 20046438 20046510 AGCTCTCCAAATTGTACCAC 57 20046377 20046396 CGGAGATCTGAACAAATCGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 gek FBgn0023081 FBtr0072287 2 1 1 80 2R 19984982 19985000 CGTTCTCTATGACGAGTGC 58 19984857 19984940 AAGGGTTTGGATAGTTTGAGG 58 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 1 2 2 100 2R 19971098 19971186 CCAGCCTTTGAACTTAAATCCA 59 19971247 19971265 TTGATGCCGACATTCTCCT 59 NA Drosophila melanogaster 61 CG17658 FBgn0034924 FBtr0072133 3 1 1 80 2R 19782695 19782776 AAACTTGGTCAAGGAATCTGAG 58 19782816 19782835 ACGAAGCACTTCAGAAAGGA 59 NA InUTR Drosophila melanogaster 61 Upf3 FBgn0034923 FBtr0072221 2 1 1 104 2R 19782129 19782205 TCGTTAAGATTGTGATGCGG 58 19782044 19782065 CCTTGCAGTAGTAATACGAGTC 58 NA Drosophila melanogaster 61 wibg FBgn0034918 FBtr0072233 2 1 1 117 2R 19743992 19744011 TATCCAAGACACTGGAGGAC 58 19743894 19743912 CTGCTCTCGATCTGTTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15800 FBgn0034904 FBtr0072245 1 1 1 60 2R 19678527 19678545 GTGGGCTGAGTACCATGAG 59 19678485 19678504 AAGAGGATCTTTGCTGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072103 3 1 4 135 2R 19496193 19502123 AGACTCAGTTGCTGTAAGGT 58 19496077 19496095 GAAAGAGGTCCGTCTTCAC 57 NA InUTR Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072026,FBtr0072025 2 2 2 97 2R 19300606 19300624 CAAGTACAAGTCCGTCCAG 57 19300308 19300545 CAATGGGAATATCGAGGGC 58 NA Drosophila melanogaster 61 CG3520 FBgn0034859 FBtr0072027 2 1 1 80 2R 19284604 19284680 TCAGGAGGCTAAGATATACGAG 58 19284545 19284563 CTGAAGACATCGGCATAGG 57 NA Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 1 2 2 127 2R 19272684 19272706 CCTATTCTCAAATCCATGGATGG 59 19272459 19272532 CCAAGCGTACTCTCATGTG 58 NA Drosophila melanogaster 61 Klp59C FBgn0034824 FBtr0071975 2 1 1 60 2R 19012205 19012223 TGTTCCAAATCGTGCTGAG 58 19012163 19012182 ATAAGCGAGAATTTCCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 1 2 2 80 2R 18778566 18778646 TATAAAGGGATTCCTGAGCCA 58 18778687 18778706 ATCTCCATTAAGGTGTGCAG 57 NA Nonspecific Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273314,FBtr0273318 2 5 5 80 2R 18595526 18595545 GTTCCGTAACTATCCCTCCA 58 18595587 18595665 ATGGATAGGCAGTATCTGGT 57 NA Drosophila melanogaster 61 Obp59a FBgn0034766 FBtr0071870 3 1 1 140 2R 18590569 18590670 CGAGGAGATGAATATGGTGGA 59 18590772 18590790 CTCTCCAGATAGCGGAAGC 59 NA Drosophila melanogaster 61 CG30196 FBgn0050196 FBtr0071927 2 1 1 84 2R 18542732 18542750 TACCCACGTGAAATCGGAG 59 18542574 18542684 GCGAATGGGATTACAGCAG 59 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 1 2 2 82 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361781 18361799 TACACTTTGGGCATCTGCA 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242 3 1 4 137 2R 18294312 18294559 GCTTAATCGTGTGCTGACC 59 18294660 18294678 TCGTAGTCGTAGTCCTTGC 58 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847,FBtr0113107 2 4 4 80 2R 18227482 18227502 AGTATATCACGAGTGTTTGCC 58 18227292 18227442 GTAGTCGGCATATTCAGTCAC 58 NA Drosophila melanogaster 61 Gr58c FBgn0041237 FBtr0071727 2 1 1 80 2R 17865178 17865196 TATTCGGGAAGGCAATGCA 59 17865297 17865315 GCGATTCATGTAGAGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4372 FBgn0034665 FBtr0071738 2 1 1 60 2R 17725611 17725630 CCATCATACAGGGTCAACAC 58 17725570 17725588 AATTTACCCTCCGCATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34203 FBgn0085232 FBtr0112396 1 1 1 120 2R 17169142 17169160 TCAGCAAAGAACAAGTCGA 57 17168981 17168999 GCACAAGCTCAATGATCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33785 FBgn0061362 FBtr0091786 1 1 1 117 2R 16531175 16531194 GATTATCGAGGAGGACACCA 58 16531002 16531095 GTGATCCACCTCCTTGAGG 59 NA Nonspecific Drosophila melanogaster 61 CG11099 FBgn0034485 FBtr0086315 3 1 1 117 2R 16124369 16124388 ACGTATCCAACAATGAGCTC 58 16124468 16124544 AAACCACTTAGCTCCACTG 57 NA Drosophila melanogaster 61 CG16894 FBgn0034483 FBtr0086324 3 1 1 60 2R 16099944 16099965 AAGTATTGCCCTCATCAAACAG 59 16099905 16099926 TTCCTTCACCAGATTGTATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 1 6 6 123 2R 15418200 15419687 ATTGAGGGTAAAGGCACCA 59 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 CG30127 FBgn0050127 FBtr0086556 3 1 1 105 2R 15215768 15215787 GACACCACCATTAACACGTC 59 15215556 15215700 AGTTGTCACCCATGTCCAG 59 NA Drosophila melanogaster 61 CG15100 FBgn0034401 FBtr0086627 1 1 1 80 2R 14737802 14737910 AGTTGGTTAACCTAAATGACGC 59 14737743 14737761 ACAAACGCAATCCGTTGTC 59 NA Drosophila melanogaster 61 CG5323 FBgn0034362 FBtr0086706 1 1 1 225 2R 14502745 14502824 AAATGCAGAATGAGATGCAC 57 14503109 14503127 TGATCCTCATTGGGACTGG 58 NA DesignRelaxed Drosophila melanogaster 61 GstE5 FBgn0063495 FBtr0086673 3 1 1 60 2R 14292717 14292735 GAAGCTGCCTTACTACGAG 57 14292758 14292777 TAGAATGGTCTCCAACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rdgBbeta FBgn0027872 FBtr0086888 3 1 1 83 2R 13585371 13585393 CCCGAGTCTTCTATGTGATAGAG 59 13584359 13584436 GTTTGGGTATAAAGGAACACGT 59 NA Drosophila melanogaster 61 rdgBbeta FBgn0027872 FBtr0086888 1 1 1 80 2R 13585371 13585392 CCGAGTCTTCTATGTGATAGAG 57 13584361 13584437 TTGGGTATAAAGGAACACGTG 58 NA Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 2 3 3 91 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563333 13563425 CTAATGGCCTGGATTTCGTC 58 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 2 1 2 112 2R 13345282 13345301 TGATTGGAGAGCCCAATCAG 59 13345376 13349515 TGTCGACGTCGATTTACCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298,FBtr0086994,FBtr0086992,FBtr0301482,FBtr0086991,FBtr0290299,FBtr0086993 3 7 7 70 2R 13153662 13153680 CAACAACTTCAACTTCGCC 57 13153711 13162930 GCTGAGTTTACATTATCTTCGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 ste24a FBgn0034176 FBtr0087059 3 1 1 106 2R 12889347 12889365 GTCATCATTGGACGCAGAC 59 12889108 12889278 TTTGGTACACTTTCACCTGG 58 NA Drosophila melanogaster 61 Nup62 FBgn0034118 FBtr0087150 2 1 1 60 2R 12232735 12232755 AGCATATCAACAAGTGGACTC 58 12232777 12232795 GCCTGTTCGGTGAATACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087146 3 1 5 97 2R 12225931 12226959 TAAACGTAACGAGCTCAGG 57 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA InUTR Drosophila melanogaster 61 CG8435 FBgn0034084 FBtr0087249 3 1 1 126 2R 12057693 12057711 AGTACAACACGGTGGAGAC 59 12057525 12057543 ATTTCCTCAGCGACAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 2 3 3 87 2R 11977133 11977151 CTTGTCGCTGTTCCTTCTC 58 11976780 11977082 AATTACAGGGACCTGGGAG 58 NA Drosophila melanogaster 61 dup FBgn0000996 FBtr0087387 3 1 1 82 2R 11265923 11267076 GGAGGTGCTTATAAGCCCT 58 11265859 11265879 ACATAAGCTCATGTTTGTCCG 59 NA Drosophila melanogaster 61 Obp51a FBgn0043530 FBtr0087420 3 1 1 151 2R 10912203 10912290 GCTTTATTCGAATCTGAAGCG 58 10912072 10912090 GGTGTTACCACACCATTGG 58 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087441 3 1 2 106 2R 10658258 10658276 TCTGTTATCCTACAGCGGC 59 10659316 10659334 TCTTGGCCTTGGTAATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 3 2 2 81 2R 10395746 10395765 CATATCCAGGATGTCGTCCA 59 10395809 10395900 CCTGGCCGATATCATTTCC 58 NA Drosophila melanogaster 61 CG17388 FBgn0033937 FBtr0087489 2 1 1 63 2R 10330394 10330412 TCCACATCCGCATCTACTG 59 10330439 10330518 CATTCCACAGTGTCCACTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 1 1 1 278 2R 10316247 10319429 CGAAATTCAAGTTTCAGCCC 58 10315988 10316006 AATAGACTATGGGTGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Sin1 FBgn0033935 FBtr0087487 3 1 1 60 2R 10300205 10300224 TACAATATCCCGACGTTCCT 58 10300244 10300265 TCCTCTGTCATATACAAAGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8589 FBgn0033921 FBtr0087562 2 1 1 88 2R 10188556 10188634 TTATGCTGTGGACCATCGA 58 10188486 10188504 ATTCAATATCGCGAGCAGG 58 NA Drosophila melanogaster 61 Cpr50Cb FBgn0033869 FBtr0087630 3 1 1 111 2R 9682703 9691141 TCCTGCTTAGCTTATCCCTC 58 9691215 9691233 GGTTCCGAGTAGTCGTAGC 59 NA Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670 3 1 2 203 2R 9395141 9395163 CCAGGATAGCTAAATCTTCACTC 58 9395382 9395400 TTTCTCTGCCAATCCTTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388,FBtr0087669 3 2 2 110 2R 9399845 9399863 AACAAAGGTTGCAACTGCA 59 9399937 9400022 CATGTTTCGACACCCAACG 59 NA Drosophila melanogaster 61 lat FBgn0005654 FBtr0087768 3 1 1 80 2R 9091864 9091882 GTCAGCAGCAAGATTCGTC 59 9091743 9091822 CAGAACTTTATCCAGCACCTC 58 NA Nonspecific Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 3 2 2 143 2R 8516957 8517040 GGAGCAGTTGAATAATTTCCAC 58 8516835 8516855 TTGATCTTTGCCGATACATCG 59 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 3 2 2 81 2R 8373045 8373064 TCAAGGTACCTGCATCACTG 59 8373103 8373192 CGTAATTTAGTGATGAGTACCCAC 59 NA Drosophila melanogaster 61 CG13159 FBgn0033721 FBtr0087912 1 1 1 68 2R 8262876 8262894 GAAGTTCTTCGCTGTCCTC 58 8262926 8262944 GTAGTTGCGGTAGATGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087999 1 1 2 137 2R 8141850 8141934 AAGCTGCTAAATACCACCG 57 8142035 8142053 GACGCTCTTCAACTTCTCG 58 NA InUTR Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088013 3 1 3 210 2R 8055699 8061607 GAATAATAAACTCGACCCAGTG 57 8055510 8055528 GATGCCCTATCGTGATCTG 57 NA DesignRelaxed Drosophila melanogaster 61 TwdlBeta FBgn0033658 FBtr0088062 2 1 1 63 2R 7750688 7750707 GTATCCTCCTTCTCTTGGCC 59 7750644 7750662 GATCTAGGTGGTTCCGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 3 2 2 110 2R 7327828 7328587 CGGTTAAGATTCTCATCGATCAG 59 7328657 7328675 GGAGTCCCAGGAAGAACTC 59 NA Drosophila melanogaster 61 iotaTry FBgn0015001 FBtr0088125 1 1 1 60 2R 7244327 7244345 GAATTATTGGCGGAAGCGA 58 7244368 7244387 ATCTGAATAGACACCTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 2 3 3 80 2R 7174697 7174719 GGATCATCTTACGTATTTGGTGG 59 7174583 7174660 GCATTCATCTCAACATTGATGG 58 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089727,FBtr0089728 1 3 3 60 2R 6773138 6773156 GTCTGCTGAAAGTTTCCCG 59 6773180 6773198 TTCTCGTACACCAGCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 1 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific Drosophila melanogaster 61 CG12338 FBgn0033543 FBtr0088256 3 1 1 114 2R 6618101 6618186 ATTACGCAACAATGGATGACC 59 6618007 6618027 AGGTGCGGGAGTAAATATAGC 59 NA Drosophila melanogaster 61 CG17765 FBgn0033529 FBtr0088274 3 1 1 102 2R 6367954 6367973 CGATCTGGAAAGATAAACGC 57 6368037 6368603 CGAACATGCTTATCATCAGC 57 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460,FBtr0088262,FBtr0088263 2 3 3 80 2R 6321220 6321301 GATGAATCGCCTGGTTTCC 59 6321342 6321363 TGATTTGTGTAGCCATTGAAGG 59 NA Drosophila melanogaster 61 eve FBgn0000606 FBtr0088390 3 1 1 160 2R 5867051 5867141 GCCAAATGAATGCCTATCCA 58 5867264 5867282 GACGGGACACGTAGTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1418 FBgn0033468 FBtr0088440 3 1 1 92 2R 5851818 5851889 TATACTGCCTCATCACGGC 59 5851744 5851763 TAATGTTACTGTTGCGCACG 59 NA Drosophila melanogaster 61 CG1663 FBgn0033449 FBtr0088477 1 1 1 82 2R 5724929 5725005 GCCACCATGACTACATCTC 57 5725049 5725069 GAAGTACTGAATAACTCCGGG 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672,FBtr0112673 1 4 4 80 2R 5463611 5463691 AACCAGAAGTCCCTGAAGC 59 5463549 5463567 ACAAACCTTGTTGATGCCG 59 NA Drosophila melanogaster 61 CG8247 FBgn0033348 FBtr0290033 1 1 1 80 2R 4808333 4808353 CTACCCACAAATACCTTGGAC 58 4808210 4808294 AGTCCGTAAACTTTCTCTTCTC 57 NA Drosophila melanogaster 61 CG8586 FBgn0033320 FBtr0088725 1 1 1 160 2R 4582747 4583228 AGCACATAGTTTCCCACCA 59 4582605 4582623 AATCATCCGAGTCTTCGCA 59 NA InUTR Drosophila melanogaster 61 Cyp4e2 FBgn0014469 FBtr0088745 1 1 1 80 2R 4334031 4334115 CGGAGAAAGACTATGTTATAGATGG 58 4334151 4334171 TATAACCCAGCATCACGAGAC 59 NA Drosophila melanogaster 61 CG18449 FBgn0033285 FBtr0089732 3 1 1 63 2R 4255145 4255163 CCACAATCACAGATGCAGC 59 4255100 4255118 GACCTGGCCTGTATTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boly FBgn0050362 FBtr0088769 3 1 1 67 2R 4253825 4253843 GAGTGGATTGACGTCAAGG 58 4253776 4253795 CACCAAATTCATACGGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12825 FBgn0033221 FBtr0088829 1 1 1 97 2R 3676781 3676799 AGGAGGAATCATCTGCTCG 59 3676857 3676940 TCTCGTAGAGTCCATATTTCCA 58 NA Drosophila melanogaster 61 CG12042 FBgn0033206 FBtr0088944 1 1 1 60 2R 3555415 3555433 CTGAAGCTCACGAATCCGA 59 3555373 3555391 GAGGAGATGCAGTCAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 2 3 3 80 2R 3490153 3490636 GGATAAAGTGGGTCTTCGC 58 3490091 3490109 ACCGAGAAGACCTTGATCC 58 NA Drosophila melanogaster 61 Corin FBgn0033192 FBtr0088909 2 1 1 81 2R 3448167 3448248 GACAAGGATCCCAAATCCAC 58 3448292 3448310 ATTCGTCGCACTGATTACG 58 NA Drosophila melanogaster 61 CG11123 FBgn0033169 FBtr0088971 2 1 1 60 2R 3328429 3328449 TTCTGGATGCTATGAAAGTGG 58 3328471 3328547 TTGTTGGCCATGATGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9436 FBgn0033101 FBtr0086134 3 1 1 60 2R 2645942 2645963 TGGAATACGTAGACCTCTACCT 59 2645903 2645923 CTGTCATTGTGGAACTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or42b FBgn0033043 FBtr0086051 1 1 1 80 2R 1685191 1685268 CCACAAGCTCATTCTAAGATACTG 59 1685134 1685152 CCGATCAGCAGAAACTGTG 58 NA Drosophila melanogaster 61 CG10396 FBgn0033020 FBtr0086089 3 1 1 152 2R 1241505 1241523 ACAACTGTCGAATTTCCGG 58 1241699 1241720 CCATAAGTCGAATACCATCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Me28S-A2958 FBgn0086037 FBtr0114313 2 1 1 61 2L 16417822 16417841 GATTACGATGAGGTTGTCGA 57 16417780 16417798 AATTTATGAAAGCGGCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2263 FBgn0082990 FBtr0113537 3 1 1 60 2L 5187849 5187867 GATTATTGGATGCTGGCGT 58 5187888 5187909 TTTATGGAGTGATGCGATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33315 FBgn0053315 FBtr0081172 1 1 1 60 2L 19075281 19075299 TCGCTACGACGTATTCCAC 59 19075239 19075257 CCATCAAGGTTTCTTCGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40465 FBgn0250817 FBtr0100850 3 1 1 60 2L 20253961 20253982 ATATAGAATGGGTCCAGTCTGG 58 20253922 20253941 TACCACAGGTACTCTTCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0085939,FBtr0299904,FBtr0085938 1 3 4 80 2L 22156807 22158522 AAATTCAAGGTGCTGGCTG 59 22158566 22158584 CTGTTGTCAATGACGGGTG 59 NA Nonspecific Drosophila melanogaster 61 CG31601 FBgn0051601 FBtr0085947 3 1 1 113 2L 22042188 22042206 CAGAATTGTCGGTTTCGCC 59 22041651 22042112 GTAGGTATCCTTAGCTGGCG 59 NA Drosophila melanogaster 61 tio FBgn0028979 FBtr0089377 3 1 1 100 2L 22020083 22020701 AGTGCAAGTGAGTTAACTAGTC 58 22020762 22020780 TCATTCGATGGACATCGGA 58 NA Drosophila melanogaster 61 His2B:CG33872 FBgn0053872 FBtr0091876 1 1 1 60 2L 21528098 21528117 AGAAGAACATCACCAAGACC 57 21528057 21528075 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33876 FBgn0053876 FBtr0091880 1 1 1 60 2L 21518412 21518431 AGAAGAACATCACCAAGACC 57 21518371 21518389 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33842 FBgn0053842 FBtr0091846 1 1 1 60 2L 21500201 21500219 CGCTCAGGACTTTAAGACG 58 21500243 21500261 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 1 2 3 61 2L 21312000 21312018 CTCAAACGATACGGAGTGG 58 21312042 21312115 CGCCAATAAGAGTAATGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Fs(2)Ket FBgn0000986 FBtr0081392 2 1 1 80 2L 20737436 20737527 GTATTTGCGATATAATTCCCGAGG 59 20737566 20737584 TTAGGCTCTTCACGAAGCA 59 NA Drosophila melanogaster 61 Ugt37a1 FBgn0026756 FBtr0081372 3 1 1 88 2L 20373436 20373454 ATCGACCAACGAAATCGTC 58 20373314 20373335 GATGTATTCCTTAGGATGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271 2 1 7 74 2L 19572161 19572180 AATTCCTCACAACATTCCCG 58 19571731 19571752 GCTCTTCTCGTTTCTGTATGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 3 2 2 92 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542982 19543633 ATCTTTATCAGCGTCGATCCA 59 NA Drosophila melanogaster 61 Top3alpha FBgn0040268 FBtr0081246 1 1 1 80 2L 19499081 19499153 TGGAAGATTAAGGTTCTGCAC 58 19499194 19499213 TTCCTTATCGAAGAGTCGGT 58 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 2 2 3 87 2L 19166349 19168105 AGCAGTAAAGCTGTTACTCCT 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 CG10621 FBgn0032726 FBtr0081191 3 1 1 98 2L 18953225 18953243 GATAAAGAACACGGTCCGC 59 18952985 18953164 ATCAAAGGGTATCCCTCCTG 58 NA Drosophila melanogaster 61 Mst36Fb FBgn0261349 FBtr0302267 2 1 1 88 2L 18674269 18674352 GAGTTGTTAAGAAGTGCCCA 58 18674200 18674220 AACGTACTGGATCTAATGCTC 57 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 2 4 4 81 2L 17418041 17418060 TTCAAACAGATGGCCATAGC 58 17417634 17417999 GTTTCAGCTCCACATTAACAC 57 NA Drosophila melanogaster 61 CG13282 FBgn0032612 FBtr0080929 1 1 1 85 2L 16833289 16833447 GATGAGGGAGGAGTACCTG 58 16833222 16833240 TTATGTAGCAGGGTCCTGG 58 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300002,FBtr0300003 3 2 4 80 2L 16545427 16557886 AATACTTGCAAAGCATTGCC 58 16557926 16557947 TTGAACTTGGATAAACACAGGG 59 NA InUTR Drosophila melanogaster 61 Idgf2 FBgn0020415 FBtr0080861 3 1 1 85 2L 16449675 16449695 TAAAGGACTCCTTGAGAGCTG 59 16449736 16449819 GGGAATATCAAAGTACCATGTTGAG 60 NA Drosophila melanogaster 61 heix FBgn0028375 FBtr0080852 3 1 1 204 2L 16298184 16298880 AAGGATGAGGTGGTATCGC 59 16297998 16298022 GTCCAAAGAGTATCAGTATAACCAG 59 NA DesignRelaxed Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003,FBtr0090006,FBtr0090004,FBtr0090005 1 4 4 80 2L 16176172 16176191 TCTCAATACGGGTGTCTTGG 59 16176234 16176315 AACACGTTGGTGTACTCCT 58 NA Drosophila melanogaster 61 Sfp35C FBgn0259965 FBtr0300311 3 1 1 205 2L 15201974 15202046 GTTATTCTGGCCTGTATGCT 57 15201729 15201748 ATCTCACAGAACCCAGACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703,FBtr0080702 3 2 2 94 2L 15087276 15087388 AGTGCTCCTGTTAATGTACTG 57 15087444 15087462 GTGAACTCCCTCAAAGCAC 58 NA Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 1 1 1 77 2L 14871877 14871895 AAGTTTACGCGATGAGCTC 58 14871765 14871837 CATTGCGAACGTAGGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)34Fd FBgn0261535 FBtr0080639 2 1 1 91 2L 14353624 14353705 TATGCACGGATACTTTATGGAC 58 14353554 14353572 TCTTATCTTTGCGGAAGCG 58 NA Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463,FBtr0114462 3 2 3 108 2L 14274843 14274863 CGAAAGAATCAAGTTGGTTGC 58 14274930 14277323 CTTGAATTCCACTGAGATTGGT 58 NA InUTR Drosophila melanogaster 61 bgm FBgn0027348 FBtr0080590 2 1 1 80 2L 14018556 14018574 TGGATGCCATTTCCAATGC 59 14018618 14018695 CCACTTCGGTCTTTAGGGT 59 NA Drosophila melanogaster 61 nimB3 FBgn0054003 FBtr0100058 1 1 1 89 2L 13967805 13967823 TGGATCCTGTTACGCAGTG 59 13967678 13967753 GATTGATGGTTTCCACGGTG 59 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942,FBtr0080536 1 2 2 89 2L 13791515 13791533 ATTCGAACCCAAGGAGGAG 59 13791586 13791673 TTTAAGTTGTCATGGCCGG 58 NA Nonspecific Drosophila melanogaster 61 CG6565 FBgn0032513 FBtr0080468 1 1 1 80 2L 13375142 13375222 CTCATACAAGGTTTATGCTCGA 58 13375263 13375281 CGACGGTAATCCAAATCCG 58 NA Drosophila melanogaster 61 CG31851 FBgn0051851 FBtr0080454 3 1 1 60 2L 13258081 13258102 GGGATATGTGAAATATCGCTGG 59 13258122 13258141 CATTTCGTATCCATGGTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31851 FBgn0051851 FBtr0080454 1 1 1 60 2L 13257907 13257927 CTGGAATCATGGACACATCTC 58 13257946 13257967 CAAGCCCAGTTTACGATAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9932 FBgn0032469 FBtr0089956 1 1 1 86 2L 13027741 13027823 CAAGTGTAACTTCGGGCAC 59 13027673 13027691 TTGGACTTCGGATAGCTGG 59 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 2 2 2 127 2L 11991263 11991341 CAAATATAGCTCCCATGTCCG 58 11991428 11991448 CATAAATGGAAACCCGATCCT 58 NA Drosophila melanogaster 61 sala FBgn0003313 FBtr0080237 2 1 1 85 2L 11486214 11486305 AACTACTGATTGCTCTGTTTGC 59 11486350 11486369 CCCTCCATATCCTCCTTGTC 59 NA Drosophila melanogaster 61 piwi FBgn0004872 FBtr0080166 1 1 1 80 2L 10984993 10985017 CGAATTAGTGGTACTAATTCCTGAG 59 10984333 10984957 CGCATAAGCTGAAAGTTTGAG 58 NA Drosophila melanogaster 61 SCAR FBgn0041781 FBtr0080148 1 1 1 80 2L 10978639 10978657 ATTGATGCCCAACAACGTC 59 10978697 10980457 TACACTCCCATATTTCCGTATCC 59 NA Drosophila melanogaster 61 CG6443 FBgn0032290 FBtr0080110 3 1 1 119 2L 10729296 10729377 AAAGCCAGAGCAGAAAGAC 58 10729460 10729478 TTGGAATAGAGCCTACCCA 57 NA Drosophila melanogaster 61 CG6431 FBgn0032289 FBtr0273319 3 1 1 80 2L 10727685 10727706 AGACTGTCTTCATAATACACGG 57 10727746 10727845 GGGATAGGTAAGCATCTCGA 58 NA Drosophila melanogaster 61 CG31871 FBgn0051871 FBtr0080104 2 1 1 80 2L 10668325 10668701 AGTCAGGATTAGGCTACATGC 60 10668743 10668761 TCTTGGAGTACCGATTGCC 60 NA Drosophila melanogaster 61 CHIP FBgn0027052 FBtr0080027 3 1 1 86 2L 10438621 10438641 GGCCAATTTAAAGCTGAATGG 58 10438687 10438766 ATATGGTCATCGCATTCTTGC 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 2 2 3 226 2L 10426914 10426933 GTTTATGCCGACATTCTGAC 57 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 2 5 5 80 2L 10296849 10296947 GTTTCTAAAGCTAAGCTCGGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 CG5734 FBgn0032191 FBtr0079960 2 1 1 60 2L 10206166 10206184 AGAGATGCCAAGCTAACTG 57 10206124 10206142 CAACGGTCTGGTTGTAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4804 FBgn0032178 FBtr0079938 3 1 1 80 2L 10063643 10063722 AGAATGCCACAGAATATAAGCC 58 10063762 10063781 AGAAGAATGGATGGTCAGCT 58 NA Drosophila melanogaster 61 lectin-30A FBgn0040097 FBtr0079816 2 1 1 60 2L 9254526 9254544 CTCGCACAGGATTAATCCG 58 9254484 9254505 CTCAATGTAGAAGCGTCTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 aust FBgn0032104 FBtr0079819 1 1 1 99 2L 9250825 9250843 CGTGGTAGGACTGATAAGC 57 9250678 9250762 GCTTAATAGCTGCCCTCTG 58 NA Drosophila melanogaster 61 Toll-4 FBgn0032095 FBtr0079768 3 1 1 102 2L 9085520 9086255 GATGGGAGACATTAACTGTTCC 58 9086318 9086336 AGCTATTGAGCATGTTCCG 58 NA Drosophila melanogaster 61 CG9582 FBgn0032090 FBtr0079778 2 1 1 60 2L 9024718 9024736 GTCATCATAGCTGGGTTGG 58 9024676 9024700 CCATATCCAAAGTAACACTCATCAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18662 FBgn0040963 FBtr0079760 2 1 1 81 2L 8981012 8981093 GTACCATCTTGATGTATACGATGAG 59 8981132 8981150 GTAACCACCTCCAAGACCC 60 NA Drosophila melanogaster 61 CG32984 FBgn0052984 FBtr0079758 3 1 1 93 2L 8965356 8965434 GATCACTACGATAGGATGGGA 58 8965489 8965507 CTGACCTACACTCCACCAG 59 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079678,FBtr0079679 3 3 3 93 2L 8484071 8484089 ATCTGATCCACTTGTCGGG 59 8484146 8484820 CCCACGTTCGTAAAGTACC 58 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 2 3 3 62 2L 8440883 8440901 TCTCTTCGAGCCAAAGGAG 59 8440925 8441037 TCTTTGATAATCTCCTCCGGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 3 2 2 83 2L 8364296 8364541 GCAAGGGTATTTCCCAATCAG 59 8364233 8364251 GCTCCTTGACATCATCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 2 2 2 82 2L 8364296 8364541 GCAAGGGTATTTCCCAATCAG 59 8364234 8364252 CTCCTTGACATCATCTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Spn2 FBgn0028987 FBtr0079624 2 1 1 85 2L 8240903 8240924 GGATGTAACTTTAAGGCTTCCC 59 8240780 8240857 CATCTTGTATGCCCATCGC 59 NA Drosophila melanogaster 61 CG8673 FBgn0031986 FBtr0079575 1 1 1 128 2L 8124621 8124639 CAGGAAACAGCAGTGAAGG 59 8124731 8124816 CTAGCCCGTCATCATGGAG 60 NA Drosophila melanogaster 61 CG7211 FBgn0031941 FBtr0079481 3 1 1 203 2L 7747382 7747402 TGAGTCAATTGATTGCCAAGG 59 7747620 7747638 GTCCGGACTTCTTTAGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 TepIII FBgn0041181 FBtr0079477 2 1 1 80 2L 7706049 7706069 GTTGTAGACATCGATACACCC 58 7706111 7706190 AAATGCATAGTGCGCTCTG 59 NA Drosophila melanogaster 61 CG13779 FBgn0040954 FBtr0079403 1 1 1 96 2L 7064134 7064152 AACAAGAGCGAAGACTTGG 58 7064267 7064285 TTAGCTCTTCCTCGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 2 3 3 98 2L 6722213 6722231 CAGACCTCCCAGAAGTTCG 59 6722078 6722154 CTCTACGAACTTGGTCAATTCC 59 NA Drosophila melanogaster 61 CG31636 FBgn0051636 FBtr0079324 1 1 1 92 2L 6657367 6657445 CGTAAGAATGGGAGTACTCCT 58 6657295 6657313 CTCGTATCGTAGGAACCGG 59 NA Drosophila melanogaster 61 Sfp26Ac FBgn0259959 FBtr0300305 1 1 1 140 2L 5884618 5884636 ATGCCTTACCTGTGACTGG 59 5884433 5884514 TCGGTGAATGGTTTCAGCT 59 NA Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079132,FBtr0079131 2 2 2 276 2L 5436992 5437011 GAATTACTCCTCGTGCACTG 58 5436680 5436698 ATCAGAATATCCAGCTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0079083 1 1 5 99 2L 5277170 5277965 GTTCGATGAGCGTTCACTG 59 5277089 5277107 GAGTTTGGGTGAAACCTCG 58 NA Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026,FBtr0111024 1 2 2 106 2L 5077705 5077784 AACTTCCGATGGTACCGAG 59 5077617 5077635 TCGATGGAGAACAGACCAC 59 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 2 4 4 84 2L 4845308 4845326 AAACCGACCAAGATTCCTG 57 4845147 4845260 TGATGCCCATTACTTTGCC 58 NA Drosophila melanogaster 61 CG34351 FBgn0085380 FBtr0112561 3 1 1 81 2L 4717789 4717809 TTGTTCCTACGTGAACTTGTG 58 4717851 4719813 CTCGGTTCTCATAATAGCCG 58 NA Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0289933,FBtr0077507 3 2 2 60 2L 4007711 4007732 CATCAATATCAACCTCAAGTGC 57 4007752 4007771 TGCATAGTACAGGACTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0289933,FBtr0077507 1 2 2 60 2L 4007712 4007733 ATCAATATCAACCTCAAGTGCG 59 4007752 4007772 TTGCATAGTACAGGACTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 2 3 3 83 2L 3722007 3722360 ATGCAGCCAAGACTATTGG 57 3722407 3722425 TATCGGGATGGGTCTTCAG 58 NA Drosophila melanogaster 61 odd FBgn0002985 FBtr0077557 3 1 1 279 2L 3606086 3606293 AGAACAAGACTTTGCTGAAGAG 59 3605828 3605847 AACTGGATACTGCTGTGGAG 59 NA DesignRelaxed Drosophila melanogaster 61 odd FBgn0002985 FBtr0077557 2 1 1 279 2L 3606086 3606293 AGAACAAGACTTTGCTGAAGAG 59 3605828 3605846 AACTGGATACTGCTGTGGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG15414 FBgn0031542 FBtr0077568 3 1 1 100 2L 3481905 3490840 AAAGTGAAGATGCCTTACCAC 58 3481825 3481843 GTTGGTCTGCTGTAATGGT 57 NA InUTR Drosophila melanogaster 61 CG3246 FBgn0031538 FBtr0077572 2 1 1 97 2L 3461506 3461524 GCCAATCTGGACATGAAGC 59 3461370 3461447 CCACCGTTGAATCTCATTTCC 59 NA Drosophila melanogaster 61 CG15412 FBgn0031528 FBtr0113018 1 1 1 112 2L 3374121 3374142 TCACCGACGATGATATTATGAG 57 3373919 3373996 CATTAATAACTCCACAGACTGC 57 NA Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 2 2 2 95 2L 3040733 3040802 CATACTGTCTTGCTCCTGC 58 3040861 3040879 TTATGTACAGTCCCGACCA 57 NA Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0273293 1 1 3 234 2L 2856278 2856296 ATGTTGATCTGTACGTGCC 58 2856564 2856583 CTAGCACAAACTCACTTGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3117 FBgn0031471 FBtr0300356 3 1 1 89 2L 2847068 2847086 GAAGAGATGCCGTTCTTCG 58 2846927 2847018 ACTCATGCCTATCACATTTGAC 58 NA Drosophila melanogaster 61 CG15399 FBgn0031460 FBtr0077730 1 1 1 66 2L 2771707 2771725 TAGAGCTCAAGGATGTGCC 59 2771590 2771677 CTAGTCTTGCCCACACCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15395 FBgn0031440 FBtr0114513 2 1 1 197 2L 2610236 2610256 GCAATAAGTGAGGAGTTTCCC 59 2610415 2610489 GAAGCGATAGGCCTTTGGA 59 NA Drosophila melanogaster 61 Cyp309a2 FBgn0041337 FBtr0077748 1 1 1 80 2L 2571699 2571717 GGCATCGGAGAAGAGTCTC 59 2565555 2571659 AGTCGAAGGGATTCATAGATCAC 59 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 Ser12 FBgn0011832 FBtr0077806 2 1 1 60 2L 2250957 2250977 TGAAGACTACGTATCTTCCAC 57 2250917 2250936 GTCCACCAGTCTAATTACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10882 FBgn0031408 FBtr0077810 2 1 1 80 2L 2234979 2234998 TAGGAGGACCAGGATATCCA 58 2234859 2234937 TGGGAGGTTGATTAAAGCCA 59 NA Drosophila melanogaster 61 CG7295 FBgn0031372 FBtr0077891 1 1 1 60 2L 1870751 1870772 GAATGAAAGCATAACAGATGGG 57 1870791 1870811 CGTTACATCTGTGTCATTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 3 1 1 111 2L 1705021 1705039 AGAGTTTAAGATCGGCCCT 58 1705114 1705417 GTCCATCTGCATTTCCGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 3 1 1 70 2L 1611865 1612026 GAAAGTAGTACCTATTTCGAATCGG 59 1612054 1612072 AGCTTGACTTCGGTAGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31922 FBgn0051922 FBtr0077965 3 1 1 82 2L 1170349 1170422 TGAAGCGTTACGAGGATCC 60 1170466 1170486 GCAGTAACTGCCAAAGTATCG 60 NA Drosophila melanogaster 61 snoRNA:Me28S-A1705 FBgn0086046 FBtr0114322 1 1 1 60 X 10337996 10338017 CTTGATGAAATCATTTCGCTGC 59 10337957 10337977 GAAGAGTTGAGAAATGGCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12231 FBgn0031026 FBtr0074779 1 1 1 60 X 19425151 19425169 ATTCCTCGAACGCTTTGTG 58 19425109 19425129 CTGAAATTGACGGAAGTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0301919,FBtr0100563,FBtr0073852,FBtr0301921,FBtr0301922 3 10 10 133 X 13489267 13489366 GTCAGGACTACGATTTGAAAGAG 59 13489091 13489109 ATACTTGGAGGCGACTTGG 59 NA Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0301860,FBtr0071005 2 3 3 60 X 6893745 6893766 TCTACTTTGTGGACTTCTTCCT 58 6893787 6893805 TTCAAGACATCACTGCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB98a FBgn0261289 FBtr0085312 2 1 1 80 3R 24632860 24632879 CTCTATGAGCCATGGACAGG 59 24632922 24632993 CAGAATGAGCTTCGTCCCT 59 NA Drosophila melanogaster 61 pll FBgn0010441 FBtr0085179 1 1 1 91 3R 23077699 23077717 GTTTACGAGCGCATAAGGC 59 23077563 23077644 GTAGATGCCTCTAGCCGTG 59 NA Drosophila melanogaster 61 CG5432 FBgn0039425 FBtr0085006 2 1 1 60 3R 22240601 22240619 GGAGTGGCTACAGTTCTCG 59 22240642 22240720 AAAGTACTCCCATTACGGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14851 FBgn0038240 FBtr0082956 2 1 1 62 3R 10388472 10388490 GCAGGAATAACAACGCCAG 59 10388516 10388534 CTACTACGCGAACGTTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4115 FBgn0038017 FBtr0082568 1 1 1 93 3R 8186205 8188298 GCGAGAATGTGAAATACATCTG 58 8188352 8188370 CAACCGTTGATGTTTGTGG 57 NA Drosophila melanogaster 61 CG31525 FBgn0051525 FBtr0078924 2 1 1 60 3R 253082 253106 GACGACTTTAGATGGAAAGAATGAG 60 253121 253142 GTGGATTGACTGTTCCAAAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr77a FBgn0045474 FBtr0078281 3 1 1 131 3L 20730872 20731356 AACTCAGGCACACTATGCA 59 20730759 20730779 ATTCTAGTATTGCACCCACGA 59 NA Drosophila melanogaster 61 CG6793 FBgn0036242 FBtr0076051 3 1 1 61 3L 12036110 12036131 GAGTTATTGCACCTAATTGCAG 58 12036214 12036232 AATTCCTTGGCTTTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15227 FBgn0034554 FBtr0071514 1 1 1 60 2R 16754341 16754361 ATCAACCGTAAGATATCCGTG 57 16754383 16754401 CGTACAGTGCCTCAAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8192 FBgn0034030 FBtr0087354 3 1 1 90 2R 11433021 11433039 AGGAGGAAGAAGTGGAGGA 59 11432885 11432971 GCATAGTATCCAGAGTTTCTGTC 58 NA Drosophila melanogaster 61 vg FBgn0003975 FBtr0087785 3 1 1 80 2R 8774684 8774706 CCTACTATCCATATCTGTACGGG 59 8774743 8778990 AGTACAAATCCTGGTTGAACCT 59 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 2 4 4 135 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641197 8641218 CTTATCCATGTTCACCTTACCT 57 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047 1 1 2 80 2R 7869381 7869400 GCTCTAAAGCACATTAGCCG 59 7869253 7869340 CGTGGTAATGAAGGTATCGTC 58 NA Drosophila melanogaster 61 CG1845 FBgn0033155 FBtr0089021 1 1 1 60 2R 3164277 3164295 CTTTGGATACCGGAAGTGC 58 3164169 3164256 CAATTGAATCTATTGGCTCCAG 57 NA DesignRelaxed Drosophila melanogaster 61 Arc-p34 FBgn0032859 FBtr0081358 2 1 1 80 2L 20422167 20422188 CAAAGAAACAAGGGACAATACC 57 20422227 20422312 GCCTTTGAACACTTAATGTGG 58 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 3 5 5 81 2L 17442579 17442666 GGATACGCCATATCGTCCT 58 17442516 17442536 GTTGATCTCCAGTGTACAGAC 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 3 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 CG31661 FBgn0051661 FBtr0077932 3 1 1 60 2L 1497549 1497567 TCACCATGCAATTCGACAC 59 1497591 1497609 AATCTGCAATGGGAACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064,FBtr0078065 3 2 2 299 2L 545210 545228 ATAAAGGCACCAGTTTCCG 58 545555 545824 TCTCCATCGGAGATTCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 2 2 2 80 2L 357476 357494 ACCTACCTCGTGTTCTACC 58 357183 357432 CTTCCAGTAATCTTCCGCA 57 NA Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070707 2 1 4 295 X 4582704 4585686 AGTTACCAAGGAGAACCGC 59 4592397 4592415 TACGATCCAAAGTTGCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402,FBtr0113062 1 5 5 89 2R 5948615 5948633 AGTTCTCCAAGCTGGACAC 59 5948686 5948764 GTTTAACGTTCCGCCTGAG 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 2 4 5 60 2L 7896744 7975196 AAAGAAAGGCGGAAATGCT 58 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151,FBtr0074152 1 2 2 75 X 15880427 15880445 CCACTGACTTTCGGTTTGG 59 15880370 15880388 ATCGATCCATGTCGTAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15547 FBgn0039809 FBtr0085715 3 1 1 92 3R 26708637 26708712 TCCCAACTATATTCACGAGCC 59 26708565 26708583 TCGTAGATCTCCTCGAGCA 59 NA Drosophila melanogaster 61 CR33294 FBgn0053294 FBtr0113460 3 1 1 83 3R 19980 20000 CCATATTCATGAAAGGAGCGA 58 20044 20129 TTAAGCAAATGTGCGAATCG 57 NA Drosophila melanogaster 61 CG42557 FBgn0260759 FBtr0301256 1 1 1 148 3R 25759288 25759364 TTTAAAGCTACTTGAGCGGA 57 25759475 25759493 CTAGCTCAAGGAACTGCTC 57 NA Nonspecific Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073764 1 1 2 110 X 13224555 13225159 TCTGGAAGTCAAGGATGCC 59 13225233 13225251 ATTTGCCCTTGTAGTCGCT 59 NA InUTR Drosophila melanogaster 61 snoRNA:Psi28S-1192d FBgn0082998 FBtr0113563 3 1 1 79 X 17038031 17038052 GGACCAGATTAATTTCCATCCT 58 17037973 17037993 TCCTTTACGTTTCTCATGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-C1024 FBgn0086043 FBtr0114319 3 1 1 60 X 1995987 1996008 GCTTTCGCTTTCTGAATAAACC 58 1996029 1996047 GCGCCACTTAATTGTAGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 3 2 2 91 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291669 20291687 GTCTTCCTTCTCTGCATCG 58 NA Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 2 2 2 90 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291668 20291686 TCTTCCTTCTCTGCATCGT 58 NA Drosophila melanogaster 61 Or19b FBgn0062565 FBtr0070003 1 1 1 211 X 19989479 19989497 CGGAGACCCTTCTTCTCTG 59 19989669 19989743 CTTAATCATCACCGTGAAGGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14227 FBgn0031058 FBtr0300350 2 1 1 82 X 19582288 19582375 GCAGTATTCAGACTTCGTGC 59 19582225 19582243 AGACGGTCAACTGGAATCG 59 NA Drosophila melanogaster 61 CG14219 FBgn0031033 FBtr0074769 2 1 1 80 X 19481796 19481815 TTCACATGTTCATCGAGAGC 58 19481675 19481756 ATCGAAGCATCACTTGATAGTC 58 NA Drosophila melanogaster 61 CG7101 FBgn0030963 FBtr0074639 2 1 1 143 X 18725049 18725067 GTTCTACTGCGACATGTGC 59 18725174 18725271 TCATCAACCTGGCTGTCTG 59 NA Drosophila melanogaster 61 CG6696 FBgn0030947 FBtr0074611 3 1 1 143 X 18554695 18555284 CATAGAGCCATTGGATCCGT 59 18554571 18554589 TCGATGTAGTTCCCGAAGC 59 NA Drosophila melanogaster 61 Wnt5 FBgn0010194 FBtr0074623 3 1 1 60 X 18397625 18397643 GAGCCGATCATACAGACGA 59 18397583 18397603 CTGGAATCTCGATTGATACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 1 3 3 80 X 16870115 16870134 ATTTCTAGTCGCACCTGACC 59 16869873 16870074 TCGTATACGTGATGTCTGGAG 59 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 1 4 4 80 X 15975871 15975890 CCAAATGAACTTTCCGTGTG 58 15975307 15975831 GTAAAGAATCTTTACCGCTCCT 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074106 2 1 6 80 X 15754270 15755416 AGTTAACACTGCGTAACACAG 59 15755457 15755476 GATGATCACGCTTGCATACG 59 NA InUTR Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075,FBtr0100271 3 2 2 125 X 15362476 15362558 ATCACGGATTCCTGTCTGC 59 15362369 15362389 TTATAGGTAGTGGTGCAGGTG 59 NA InUTR Drosophila melanogaster 61 CG9503 FBgn0030598 FBtr0073974 1 1 1 82 X 14815135 14815269 CATCTTGCTTGGCAATGCA 59 14815071 14815094 CATATAGTTAAGAACAGAGCTGCC 59 NA Drosophila melanogaster 61 CG5321 FBgn0030575 FBtr0290021 2 1 1 80 X 14574484 14574502 TCGATTGGAACGACATTGG 58 14574546 14574635 CCTCGTCCAAGCAAATGAC 59 NA Drosophila melanogaster 61 CG11585 FBgn0030543 FBtr0114508 2 1 1 80 X 14083594 14083689 ATAAAGATGCACTCCTTTGCC 59 14083728 14083749 CAGATAGGTGTTACTCAATGGC 59 NA InUTR Drosophila melanogaster 61 Ste:CG33240 FBgn0053240 FBtr0300089 3 1 1 110 X 13949863 13949881 TCTGATACACAGCTGGACG 59 13949711 13949789 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ste:CG33244 FBgn0053244 FBtr0300093 2 1 1 110 X 13944786 13944804 TCTGATACACAGCTGGACG 59 13944634 13944712 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ste:CG33245 FBgn0053245 FBtr0300094 2 1 1 110 X 13943517 13943535 TCTGATACACAGCTGGACG 59 13943365 13943443 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG10993 FBgn0030524 FBtr0073837 1 1 1 102 X 13684732 13684809 AAGCTGTCAAGAAAGCCTC 58 13684648 13684666 GCTTGTAGTTGAGCAGTGG 58 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073749,FBtr0073747 1 2 3 132 X 12974590 12974678 CACCGAAGATACGTTTCGG 58 12974476 12974494 TACGGTAGATGCGTCTCTG 58 NA Drosophila melanogaster 61 Usp7 FBgn0030366 FBtr0073641 2 1 1 81 X 11919199 11919217 AGCTGCAGTTCTTCATGTG 58 11919080 11919156 TTGATGGTGCCCTTAAATGTG 59 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 2 2 2 88 X 10806370 10806551 CACATACACAGTCCCAAATACC 59 10806600 10806618 AGACTGCTGTCCTTGTAGC 59 NA Drosophila melanogaster 61 Hmr FBgn0001206 FBtr0071511 1 1 1 110 X 10486683 10486759 AGTTTCACATGCCAGAGGA 59 10486591 10486609 ACTTAAACGGACGCATCAG 58 NA Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 1 2 2 88 X 10017163 10017183 GATTATGGAAGCAACCCACTG 59 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 2 7 21 81 X 6982619 6982637 TTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 2 2 2 83 X 6662297 6662317 TTCAAGATGTGGACATGATCG 58 6662362 6662448 CCAATTTAGGCGCCTTCAG 59 NA Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 2 2 2 152 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425327 6425345 GTCGTTGTTATCGACGGTG 59 NA Drosophila melanogaster 61 CG33668 FBgn0053668 FBtr0302418 2 1 1 73 X 6313337 6313416 GATTCTTGACTACTCCGAAGC 58 6313284 6313302 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3160 FBgn0029789 FBtr0070847 2 1 1 80 X 5581341 5581359 TAACACCACGCTCAATCCT 59 5581211 5581301 TAGGAGTACTCATAGCTGATTCG 59 NA Drosophila melanogaster 61 CG12680 FBgn0029740 FBtr0300018 2 1 1 60 X 4891974 4891995 TATTGCTTCCCATTTCACATCC 59 4892016 4892034 TCTCTATGAGGCACTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cib FBgn0026084 FBtr0070641,FBtr0070639 1 2 3 97 X 4004036 4004195 TAAGGAAGCCATCGAGCAG 59 4004256 4004274 TCTCATTGGTCTCGGTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG14423 FBgn0029646 FBtr0070556 3 1 1 95 X 2839961 2839979 ACGATTATCAAGGGTGCCC 59 2840038 2840056 CTCCTGGTCCTGTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301844,FBtr0301842 3 6 6 117 X 1385477 1385496 TCTGAGCCCTTTATGGAGAC 58 1385282 1385397 CTATACCCACCAGCATCCA 58 NA Drosophila melanogaster 61 tw FBgn0086368 FBtr0070139 3 1 1 81 X 679343 679432 CTAGGAAAGATGCTCATTGGC 59 679475 679493 ACTTGTCACCTGGCTTCTC 59 NA Drosophila melanogaster 61 CG5254 FBgn0040383 FBtr0070134 3 1 1 89 X 650464 650482 GCAACCACTCGATGTAGTC 58 650535 651851 CCATTGTAGTGCACCTCAC 58 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 2 4 4 81 X 522709 522793 CTTGAAGAACATCCAAACCCG 59 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 2 1 1 70 U 2759849 2759867 CTCGACACTGTCCTATGGA 58 2759743 2759817 AAGTTCTGTATCCGTACTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11550 FBgn0039864 FBtr0085867 1 1 1 80 3R 27505150 27505252 CGAACAGTCTCTATTGTTCCC 58 27505090 27505109 ATTCAGGTCATCAAGCTTGG 58 NA Drosophila melanogaster 61 Sox100B FBgn0024288 FBtr0085735 3 1 1 96 3R 26899016 26899036 GGTCATGTCCAAACAGTATCC 58 26907623 26907641 GGGCTTCTTATCACTGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15548 FBgn0039812 FBtr0085731 2 1 1 60 3R 26787569 26787587 TATGTATTGCCCACCCTCC 58 26787609 26787629 ATCGTATCCATTCGATGAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1340 FBgn0039797 FBtr0085699 1 1 1 92 3R 26552861 26552941 CCTACAACTTTAACCGATCCA 57 26552995 26553013 TTCCATTGAAGTTCCGCTG 58 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 2 1 1 128 3R 26517468 26517575 CTACCTTCTGTCAGTCGGG 59 26517665 26517685 GTTAAAGAGGAGCATCTTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 1 2 2 80 3R 25994097 25994175 ATATTACATCCATAGGACACCC 57 25994038 25994059 GGATTCCAGTGACCATATAGAG 57 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611,FBtr0085261 2 2 2 82 3R 23798693 23798711 ATCTCGAAGATTCGCGAGG 59 23795536 23798647 ACAGTGTCGGATACCTTGG 59 NA Drosophila melanogaster 61 RpS10a FBgn0027494 FBtr0085194 1 1 1 60 3R 23478922 23478942 ACGACAGATCGAACTACAGAC 59 23478964 23478982 ACATCGCCTTTCTTGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31102 FBgn0051102 FBtr0084862 2 1 1 88 3R 21120544 21120826 GTTGAAAGATGGATTCTCACAG 57 21120477 21120495 GGGTATTCACGAATCCACC 58 NA Drosophila melanogaster 61 Orct FBgn0019952 FBtr0084599 1 1 1 60 3R 20103941 20103959 CGCCATGATAGGAAAGCTG 58 20103981 20104001 CGCTGAGAATATGTAGATGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF4G2 FBgn0260634 FBtr0089623 2 1 1 80 3R 19639532 19639750 GAAAGCGATCCTGAATCTGAC 59 19639472 19639491 GTTGGCTAAATGCTTCTCCG 59 NA Drosophila melanogaster 61 CG10300 FBgn0039107 FBtr0084445 2 1 1 102 3R 19538181 19538269 CTTTCAAGTTCGTGGTCCAC 59 19538334 19538352 TCTGCCTGATAGCCATTGG 59 NA Drosophila melanogaster 61 wda FBgn0039067 FBtr0084387 3 1 1 81 3R 19082260 19082278 GTCAAGTGCTCTGAGGAGG 59 19082120 19082220 CGTATTCGTTGTAGGAGTTATCAG 59 NA Drosophila melanogaster 61 CG4813 FBgn0039013 FBtr0084326 2 1 1 65 3R 18551423 18551441 ATGAAGAGTACGAGTGGGC 59 18551376 18551394 AATAGCCTCCTTGCACGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 1 4 4 146 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 2 3 3 71 3R 18288992 18289066 GAAGTCGTATTTGTCGGGC 59 18289101 18289119 CCCTTAGACTCCATCACGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG5382 FBgn0038950 FBtr0084237 2 1 1 60 3R 18191359 18191441 ATCCAAAGTGCATTGTGCAG 59 18191318 18191337 TTGGAGATGTAGTCGCTGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31198 FBgn0051198 FBtr0084128 1 1 1 80 3R 17581772 17581790 CCGTATGATCAAGCACACC 58 17581829 17581911 GACTGATACTCGTATTTCTTCAGG 58 NA Drosophila melanogaster 61 Synd FBgn0053094 FBtr0083966 2 1 1 80 3R 16661037 16661600 ATCGAGGATGGTTACAAACTC 57 16661642 16661660 TTTCGCATATCCCTTCTCG 57 NA Drosophila melanogaster 61 Lrrk FBgn0038816 FBtr0112788 3 1 1 80 3R 16465956 16465975 GATGAAGCTGGATGATCTCC 58 16466016 16466105 AGACTGACAATGTAGCTTCTG 57 NA Drosophila melanogaster 61 ninaE FBgn0002940 FBtr0083857 3 1 1 145 3R 15712575 15712593 GTGGACACCATACCTGGTC 59 15712380 15712468 GATATTTCGGATGGCTGATGC 59 NA Drosophila melanogaster 61 Muc91C FBgn0038642 FBtr0083687 3 1 1 137 3R 14518085 14518326 AGAGCAGCAGTGTAGTTCG 59 14516609 14516628 ATGAGCTCGATGTTGATGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12320 FBgn0038590 FBtr0083605 3 1 1 60 3R 14078161 14078181 CACTTCTTCCATCCGAATGAG 58 14078121 14078139 GCAATTCCTCCAGTTCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 2 2 2 149 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188898 11188916 GGAAGTGAACTGGGTTACG 58 NA Drosophila melanogaster 61 RpL10Aa FBgn0038281 FBtr0083024 2 1 1 60 3R 10863256 10863276 CTGAGGGATTATGATCCTGAC 57 10863295 10863316 GGTGATGCAATAGTACACTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33330 FBgn0053330 FBtr0301689 1 1 1 182 3R 10619601 10620260 CGTTATACGCAATTTGGCCA 59 10620400 10620423 GTATATTCGGTGTAGTACGAATCG 59 NA InUTR Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 3 2 2 81 3R 10496132 10496230 ATCAATGCGCTCTATGTCC 57 10496069 10496087 ACTCGATTTCGTTGCTCTC 58 NA Drosophila melanogaster 61 CG33109 FBgn0053109 FBtr0082900 3 1 1 60 3R 10046872 10046890 GAATGGAAGTTCTGGGCTG 58 10046830 10046850 TAAGACCTTTAGTCGACTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 twf FBgn0038206 FBtr0082891 3 1 1 112 3R 9948437 9948455 TCTCACCAAACGGGTATCC 59 9948588 9948709 CAACTAAGCTGCTCATTCTCG 59 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114374,FBtr0114375 1 4 4 85 3R 9258843 9258863 GAAACAAGATCTTCTCGAGGG 58 9258647 9258796 CCAGTTCAGACTGCAATGC 59 NA Drosophila melanogaster 61 pps FBgn0082831 FBtr0301631 1 1 1 80 3R 8243636 8243657 AGAAGAAGGACTTGTTTGAGGA 59 8243695 8243781 TACGCTCAAACACATTAATCCG 59 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 1 3 3 94 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595740 7595758 GTGTGACGAGTAGTCCACC 59 NA Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082535,FBtr0082534 3 2 2 80 3R 7581388 7581470 AGTTATTGACACCAGTTGGC 58 7581327 7581345 CGTAATAGTGTGCCTCACC 58 NA Drosophila melanogaster 61 CG11741 FBgn0040531 FBtr0112769 2 1 1 60 3R 4354526 4354547 GTCACTAGTCTGGATTCAACTG 58 4354487 4354506 GAAATCCTTGAGGAACTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Neurochondrin FBgn0037447 FBtr0081729 3 1 1 60 3R 2295374 2295396 TTGAGTATATGGCTACGGATCAG 59 2295414 2295434 GTGTAAGTGGTCTGTTTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp83cd FBgn0046878 FBtr0078584 3 1 1 117 3R 1933946 1934027 TATGCCTTTCGTTGAACGA 57 1934108 1934126 AATCGTTCTAGACGTTCGG 57 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 3 2 2 80 3R 1699264 1701810 TCGATCTATCAGATCTGATGCC 59 1699205 1699223 GATTGACGCTGTAGACGAC 58 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 1 3 3 80 3R 1092686 1092704 GGCGATAAGATCAAGTGGG 58 1092746 1092854 CACAGAGTCAATCTGATTGGT 58 NA Drosophila melanogaster 61 tRNA:CR32460 FBgn0052460 FBtr0078580 1 1 1 60 3L 22840868 22840888 TGTCTAGTGGTTAGGATACCC 58 22840828 22840846 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089580 3 1 2 61 3L 21827896 21827917 GTACAACAACTTCGTCAAATCG 58 21828573 21828594 CGTTGTTGTGCTTCTTAAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Rpb8 FBgn0037121 FBtr0078432 1 1 1 74 3L 21722167 21722190 CCTCCGCATATAAGATCAAATACG 59 21722294 21722312 TCAAAGAGTACTCCAGCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4186 FBgn0040634 FBtr0078246 1 1 1 178 3L 20762776 20762847 CTGCCTAAAGGAACAGGAG 57 20763045 20763063 CATCGCGTTCTTCTAAGGG 58 NA Drosophila melanogaster 61 in FBgn0001259 FBtr0078183 3 1 1 60 3L 20362490 20362509 ACTATGGACTGAATCTCGGG 58 20362530 20362550 CACATGGACTCTGTCATTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14079 FBgn0036849 FBtr0075027 2 1 1 70 3L 19091280 19091302 CTACGTAAAGTTAGATCTGCAGC 59 19091388 19091408 AATATCCGTGTGAACAAAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32202 FBgn0052202 FBtr0075051 2 1 1 88 3L 18675402 18675420 TGTACAAACAGCTGGTGGA 59 18675468 18675551 GATCCCATTTACTCTCATCACAC 59 NA Drosophila melanogaster 61 CG14059 FBgn0036690 FBtr0290221 3 1 1 200 3L 17023995 17024993 GTTCAAAGTTGCATATGTGCC 58 17023815 17023833 GTCGATTCAGATGGTGGTG 58 NA Drosophila melanogaster 61 CG9951 FBgn0036671 FBtr0075337 3 1 1 60 3L 16856810 16856830 TCGTAAATTACTCGGTTGCAG 58 16856850 16856870 GTTGAGATTGATGTTTGGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Galpha73B FBgn0010223 FBtr0075354 2 1 1 80 3L 16656830 16657850 TATGAACGAGGAGTACTGCG 59 16656769 16656789 TCATTTGAGCGATCATAGCAG 58 NA Drosophila melanogaster 61 Best3 FBgn0036492 FBtr0075618 2 1 1 80 3L 15294929 15294999 TCTATACACAGGTCGTCACC 58 15294868 15294886 TATCCCGATCGATCCACTG 58 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 2 2 2 80 3L 15060072 15060614 TTACTCAGCAGAGAAGTCCT 57 15060011 15060031 GTAGATTTGAGTTGGGTCCAG 58 NA Drosophila melanogaster 61 CG34243 FBgn0085272 FBtr0112437 2 1 1 122 3L 13776626 13779979 CGAACATATTGCCAGTTGC 57 13776522 13776541 CCTGCTATAGACTGCTTGTC 57 NA Drosophila melanogaster 61 CG14119 FBgn0036322 FBtr0075869 3 1 1 60 3L 12884903 12884923 TCAATGAATGTACCATCTCCG 58 12884940 12884963 TATAAGGTTGTCCCATATACGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5718 FBgn0036222 FBtr0076069 1 1 1 60 3L 11917202 11917220 GACAAACGCTGAAGCACTC 59 11917160 11917180 AGATCCAGAACGAAGTAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or67d FBgn0036080 FBtr0076297 1 1 1 80 3L 10267180 10267274 GCATCAGCTGTATACTAGAATGC 59 10267312 10267332 CAAGTTGTGGAAAGTTGAACG 58 NA Drosophila melanogaster 61 CG33703 FBgn0053703 FBtr0091691 1 1 1 102 3L 9505614 9505632 TTGTAAAGTGGTTCGCAGG 58 9505477 9505549 AACACCAAGGTTAAGAACGA 57 NA Drosophila melanogaster 61 CG14180 FBgn0036003 FBtr0076467 1 1 1 89 3L 9466705 9466723 TACAGAGTAGTAGCCAGCA 57 9466776 9467163 GATTGGATAGCCCATTGCA 58 NA Drosophila melanogaster 61 CG5068 FBgn0035951 FBtr0076519 2 1 1 84 3L 8980424 8980443 ATCGATATGCGAGGTCATGG 59 8980490 8980845 AGTCACCGATGTCCTTAGC 59 NA Drosophila melanogaster 61 CG13313 FBgn0035941 FBtr0076512 2 1 1 86 3L 8952220 8952238 GGCGAATGATACCCTCCTC 59 8952285 8952913 GTATAGAAAGGAAACCAGCGAG 59 NA Drosophila melanogaster 61 CG32026 FBgn0052026 FBtr0076584 3 1 1 60 3L 8831155 8831173 AGAGCATCAAGCTGATCAC 57 8831197 8831215 TACTGGAAGGTGTACTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32351 FBgn0052351 FBtr0076639 2 1 1 85 3L 8614289 8614363 GGTTACCGGTCAATATTCGT 57 8614411 8614429 TTTCACCATGTCTCCAGGA 58 NA Drosophila melanogaster 61 CG32371 FBgn0052371 FBtr0076788 1 1 1 60 3L 7761020 7761038 TTCGAGTTCCTTCAGTGGT 58 7760978 7761001 CATATTCTCGACTCTCATAGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lcp65Ae FBgn0020640 FBtr0077056 2 1 1 142 3L 6131003 6131082 TTTCAGTGGTCCTTCGAGAC 59 6130880 6130898 TTGACTTCGTAGGTCTGGC 59 NA Drosophila melanogaster 61 CG15014 FBgn0035532 FBtr0073340 2 1 1 60 3L 4321266 4321287 AATCTTCAGAAGAGTCCAAGTC 57 4321227 4321248 TTGTCATTCTCAGTAGAGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 2 2 2 80 3L 3202189 3209297 TCTGAGGAATAGTGTATTCCTCAC 59 3209333 3209354 CCCACGTCTATTTGAATCTGAG 59 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 2 2 2 106 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183796 3183947 TTATCCAGCAAATCCCGCT 59 NA Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 2 2 2 64 3L 258743 258763 GGACGTAGTTATGTTGGAGAG 58 258848 258866 CGACGATATCCGGGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CR41440 FBgn0084049 FBtr0111304 1 1 1 60 2R 619182 619200 AACGACAACACAGAGAAGG 57 619223 619242 CTACGATCCTGGTTGAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 3 1 1 122 2R 6151288 6151306 GAGTTACGATCTCGGTCCC 59 6151121 6151204 TTAGATTTCCATGGGTGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30429 FBgn0050429 FBtr0072450 2 1 1 96 2R 21134449 21134467 TCCAGTGGTACAACGATGG 59 21134527 21134603 TACCGGTTTCCATTAGCGT 59 NA Drosophila melanogaster 61 CG30423 FBgn0050423 FBtr0300122 1 1 1 88 2R 20763105 20763295 CTTAAAGGCCCTCTTCATCTG 58 20763037 20763055 AAATCTTTGTCGTGGGCAC 59 NA Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 3 2 2 87 2R 18079226 18079245 GACTTCCCAGGTCCTTACTG 59 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 PpD5 FBgn0005778 FBtr0071806 1 1 1 60 2R 17930083 17930107 CAAGGATCTATTGAGGATATTCCAG 58 17930047 17930067 GAATAGGTAGTTTGAAAGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rx FBgn0020617 FBtr0071518 1 1 1 91 2R 16804840 16804861 GGAGAAGTTCAAGAATCTGGAG 58 16804912 16805970 CGTTGCTATCTTCCGTTGAG 59 NA Drosophila melanogaster 61 insc FBgn0011674 FBtr0071562 1 1 1 89 2R 16710759 16710777 TCCATCATGTCCAACGAGG 59 16710259 16710709 GATTTGCTCGTAGAGAAAGACG 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0301760 2 4 5 139 2R 16483157 16483269 ATTCCGAGCAGTATTGCTG 58 16485964 16485984 TCTATATCCGCCGATATTTGG 57 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0301760 1 4 5 138 2R 16483157 16483269 ATTCCGAGCAGTATTGCTG 58 16485963 16485983 CTATATCCGCCGATATTTGGA 57 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0301208,FBtr0086281,FBtr0301207,FBtr0086279 1 5 5 80 2R 16211658 16211676 GACGTTCCAGAGATCGGAG 59 16211720 16211806 AACCTTCAGGAGAGCTTCG 59 NA Drosophila melanogaster 61 CG34198 FBgn0085227 FBtr0112391 1 1 1 125 2R 15570407 15570425 ACCGGATTACAACCAATCG 57 15570300 15570318 GTTATCCTTGGGAGGAGGC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923,FBtr0086660 2 4 4 97 2R 14522338 14522356 GAATTGAAACGTCGCATCG 58 14521775 14522277 GGAAGTGTGAAGTTGGCTC 58 NA Drosophila melanogaster 61 CG5323 FBgn0034362 FBtr0086706 2 1 1 226 2R 14502745 14502824 AAATGCAGAATGAGATGCAC 57 14503110 14503128 CTGATCCTCATTGGGACTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG34192 FBgn0085221 FBtr0112385 1 1 1 105 2R 13343648 13343666 ATGTTTCCGGATCTTCCAC 57 13343502 13343521 TGAGGATCACTACATCTCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302789,FBtr0302790,FBtr0302791 2 6 13 99 2R 11842269 11842346 GAGACATGGCAACATCGAG 58 11842188 11842206 CTCAACGTGACATTCCAGC 59 NA Drosophila melanogaster 61 CG34188 FBgn0085217 FBtr0112381 1 1 1 99 2R 11315174 11315195 GCCTATGTTTGAAACTAACCTC 57 11315043 11315115 TATGTGACTCCATTCTGCAC 57 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 2 1 2 109 2R 10659128 10659306 GATCCCAATCATCAAGAAAGAC 57 10659376 10659394 GATAATTGGCGACGTTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 RpS23 FBgn0033912 FBtr0087575 1 1 1 98 2R 10103604 10104042 AATTATGGGCAAGCCAAGAG 58 10103525 10103545 AAATGAGCCTTCTTGTAGTCC 58 NA InUTR Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 3 3 5 75 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30065 FBgn0050065 FBtr0087663 1 1 1 92 2R 9320803 9320821 TTTGACCAGCTGGAAGAGG 59 9320936 9320955 GCCTAGTGCTTTGTAAAGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 1 6 6 153 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015 2 1 3 106 2R 8055705 8055942 CTACACCATGTTGTGCGAC 59 8055617 8055636 AAGACGAAGTCGAGATGGTG 59 NA InUTR Drosophila melanogaster 61 CG12942 FBgn0033569 FBtr0088236 3 1 1 80 2R 6784076 6784095 GTACGAGCACATGGATTACC 58 6784138 6784210 GAATGTTGGCGGAATTTGC 58 NA Drosophila melanogaster 61 dap FBgn0010316 FBtr0088469 1 1 1 119 2R 5600965 5600983 TTGTTACGACTCCCAGGAC 59 5601064 5602431 CGCTCCTTCATGAATTCTGTG 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 3 3 3 109 2R 5076504 5076585 CTGTACTTCATGTTCTACAACACC 59 5076418 5076436 AGAATTCCCGACTCAGCAG 59 NA Drosophila melanogaster 61 CG8237 FBgn0033350 FBtr0088653 3 1 1 60 2R 4814111 4814129 CCATTTGCGTGTTGATGGT 59 4814153 4814171 TTGGTTAGGACGTCGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 1 3 3 80 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619838 4619858 ACTTCGAGATGAAGAAGTCGT 59 NA Drosophila melanogaster 61 Lcp1 FBgn0002531 FBtr0088763 2 1 1 122 2R 4318618 4318702 TCAAGTTTGTCATGATCTGCG 59 4318516 4318535 CACGAACATCATCGGATTGG 59 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 3 2 2 81 2R 4014618 4014636 TTTCATCGATGCAGCATGG 59 4014500 4014576 CAGACTAATGTCCTTCAAGCTG 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 3 2 3 81 2R 3472856 3474448 AGACCGAAATCGCAAACTG 58 3472793 3472815 CTGTATCTGTATCTGGCATATCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 3 1 1 144 2R 2537065 2539495 AATGGATATCATCAACCAGGG 57 2539601 2539619 AACTTCATAGACCACGTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17337 FBgn0259979 FBtr0086038 3 1 1 95 2R 1586851 1586933 GAGTACAAGAAAGACATTGGTG 57 1586988 1587007 AACAGAAAGACTGGGATAGC 57 NA Drosophila melanogaster 61 Mcm10 FBgn0032929 FBtr0081475 1 1 1 116 2L 21181117 21181135 AAGATGTCCCGACGTTCTG 59 21181275 21181293 TGCAGTAAATGTTTGGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2617 FBgn0032877 FBtr0081391 3 1 1 60 2L 20682954 20682973 GCTATGTGTACCTGATGCTC 58 20682995 20683014 TTCGTCGAGATTTCAATGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18810 FBgn0042133 FBtr0081386 2 1 1 60 2L 20649818 20649836 TGAAGTGGACCTGGATCTC 58 20649860 20649878 AGATCAAATCCGTCGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18806 FBgn0042129 FBtr0081307 3 1 1 60 2L 19966241 19966259 TCAATTGGTCATCGACGAG 57 19966199 19966217 GAGAATGTGTCCCTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 3 1 1 138 2L 18615747 18615765 AGCAGTGTTCAAATGGAGC 58 18615502 18615645 TTTGGAACATTCGACGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15160 FBgn0032688 FBtr0081070 3 1 1 86 2L 18593337 18593355 CGATGAAGGTATCATGGCC 58 18593405 18593488 GATGACGAGCTAGCATTGG 58 NA Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 3 2 2 80 2L 18010978 18010999 AATGAGTATTACGGAGACTCGG 59 18010851 18010938 GCTGGAATACTCCAACAGGA 59 NA Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 2 2 2 175 2L 16744377 16744699 AGCGTACAGTAATGCTACC 57 16744836 16744856 GTGGATGCATAATCTTTGTGG 57 NA Drosophila melanogaster 61 CG4278 FBgn0014092 FBtr0080834 2 1 1 60 2L 16327492 16327511 GTGGGATAAGAAGAGTGGTG 57 16327533 16327552 GCTGATGATATTCACTGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13245 FBgn0045827 FBtr0080802 1 1 1 90 2L 16004996 16005014 AACCTTAAACGTTCACCGG 58 16005140 16005158 GATTATTGCAGGCCAGGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12448 FBgn0028857 FBtr0300613 1 1 1 81 2L 15941991 15942011 GCTTTACAGAAAGGTCCACAG 59 15942052 15942134 ACTTAGCAGATCAGATTCCCT 58 NA Drosophila melanogaster 61 CG31827 FBgn0051827 FBtr0080759 1 1 1 91 2L 15705245 15705266 GCTTGGACACTAATAGTAGCAC 59 15705317 15705436 CCATATCCGCACTTTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG15267 FBgn0028862 FBtr0080707 3 1 1 84 2L 15251279 15251354 CTTTGAAATAGCCTGGTTGGA 58 15251400 15251418 TTCCGATTCGAAGATGAGC 57 NA Drosophila melanogaster 61 Pgant35A FBgn0001970 FBtr0080629 1 1 1 60 2L 14360552 14360573 CACCATGTTGAAGAACTCACTG 60 14360590 14360612 GTAATCCTTGTACTGATCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0080621,FBtr0114463 2 2 3 123 2L 14277368 14277386 TCGAGGACTTCAAGAGCAC 59 14277532 14277552 ACATGCTTAGGACGTTATCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16974 FBgn0032479 FBtr0080489 2 1 1 81 2L 13187087 13187105 TTTCGAGAATCGACAGTGG 57 13186956 13187043 ATGTACAGTCGTAATCCTGC 57 NA Drosophila melanogaster 61 Oatp33Eb FBgn0032435 FBtr0080370 1 1 1 80 2L 12448713 12448811 AACAATATACCCGATGACAGC 58 12448853 12448871 GGCATATTTCTGGCATCCG 59 NA Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 1 2 2 86 2L 12060457 12060475 TATCTCCCACGATGAGGCT 59 12060330 12060410 AGAGGCTTACTTAGTATGGCTC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299782,FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 6 6 118 2L 11818480 11818604 TCAAGAACCTGGACGACTG 59 11818380 11818398 GAACTTGTGAATCGAGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091683 2 1 5 209 2L 11278251 11278269 TTTGTCTCACTCCTGCGAG 59 11278602 11278620 CATTATGGACGAGTGCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 2 2 2 98 2L 9962389 9962407 GTGCTACTCAACGTACTGG 58 9962051 9962328 GAGGAAATTCTGAAGCAGGG 58 NA Drosophila melanogaster 61 IP3K1 FBgn0032147 FBtr0079869 2 1 1 112 2L 9783055 9786695 AATAACGAGCGGATACCCA 58 9786771 9786789 TTGAGCAGGGACATCTGAG 59 NA Drosophila melanogaster 61 ppk11 FBgn0065109 FBtr0100831 1 1 1 80 2L 9773421 9773439 GTGTCTACTACGACTCAGC 57 9773284 9773380 CAAAGGTTCCTATGAATGTCAG 57 NA Drosophila melanogaster 61 CG3748 FBgn0032110 FBtr0079803 1 1 1 60 2L 9343764 9343783 AAGACTCCTATCCGTATCCC 57 9343806 9343824 TCCGCACCATTGATTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 1 3 3 117 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 Acp29AB FBgn0015583 FBtr0079716 1 1 1 60 2L 8392746 8392764 CAGGATGAGATGGAGCTGG 59 8392704 8392725 CTATCCAGTAGCTATTGTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 3 2 2 96 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380310 8380451 TTCTCAGTGGCATAACGCA 59 NA DesignRelaxed Drosophila melanogaster 61 Spn27A FBgn0028990 FBtr0079321 1 1 1 60 2L 6672975 6672996 CGATATAGATACCTTTGTGCCC 58 6672936 6672954 TAGATGCCATGAGAACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ft FBgn0001075 FBtr0077478 2 1 1 80 2L 4208584 4208604 TACCAACAAACACGTCAAGAG 58 4208226 4208546 GATGAGTATCGTCACCTTTACAG 58 NA Drosophila melanogaster 61 CG16713 FBgn0031560 FBtr0077547 2 1 1 107 2L 3695218 3695292 ATGCAATCTGTGGTCTACCC 59 3695130 3695148 ATTTGACGCACTCGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8840 FBgn0031531 FBtr0077590 3 1 1 60 2L 3410793 3410811 ACAAGAGATCAACTCGCGT 60 3410829 3410853 CCGATCAGAGTCATTATAACTTTGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 1 4 4 98 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492328 2492346 ACGCGATCGTAGATAAGGA 58 NA Drosophila melanogaster 61 Atg4 FBgn0031298 FBtr0077953 2 1 1 96 2L 1082048 1082129 ATGACGTATATGCGTCGTG 57 1082187 1082207 TAAAGCGGGTTAATGTCTGTG 58 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 3 2 2 91 2L 952065 952083 AAGGAGACGGCTATTACGG 59 952137 952269 GATCGTAGACGTTGCTTGTC 59 NA Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 3 1 1 108 2L 861252 861270 TCTCCATCTGCTTCCAGTG 59 861342 861431 AAACTGTTGTCTTCACGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 1 2 2 122 2L 156339 156431 CCTTGAATCGGGAGTGAGG 59 156514 156535 CCAGAAGAAAGCAATAACTCCC 59 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 2 2 3 80 2L 232088 232299 GCATCATACTTCTTTACTGCCT 58 232029 232048 TCGGTGTTATCAAGTCCCAG 59 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 1 3 3 80 2L 738260 738332 GTTAACTATCAGGACATGCCC 58 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 2 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938561 1938580 TTGATCCATCCAAGTTGGCT 59 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0077702 3 1 2 80 2L 2671790 2671867 CAAAGCTATAATCTAGGCCGG 58 2671906 2671927 ATCATTGTATAGTTTGCTGCCC 59 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 3 4 4 60 2L 2768914 2768934 AAATCAGTACTGCCTCAACGA 59 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718,FBtr0077719 3 2 2 113 2L 2770393 2770472 ATGATAAATGCGTTGCCTTCC 59 2770547 2770565 GATCGGCATCTCCATCCTC 59 NA Nonspecific Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 1 3 6 81 2L 3097976 3097994 CAACAGACAACCAAGGGAC 58 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 2 3 6 82 2L 3097977 3097995 CCAACAGACAACCAAGGGA 59 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 3 2 2 97 2L 3716095 3716165 TCCCAGTCAGGTGAATCTG 58 3716223 3716244 GTTCCTTTAACAGCTTGATGGT 59 NA Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 3 2 2 84 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872354 4872514 CCAGAAATTGTCGTTCCCG 59 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 2 4 4 63 2L 4904916 4904940 CCTCCATCTTATCCATAGTTTACTC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 2 4 11 87 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994955 4994973 CCGGATTTCTTCACATCGC 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301905 2 1 6 61 2L 5042883 5042994 ATATTGGCAAGAAGCAGGC 58 5042840 5042858 CACACGTAATGCCCAACAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 1 2 2 161 2L 5048849 5048867 GATTTGCCGGGAACATGTG 59 5048635 5048653 ATTTCCCGCTCGAATTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 3 5 8 97 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070167 5070186 GAAGATAGCGCTCTTGAGGA 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 1 5 5 86 2L 5155463 5155481 TTCTGTGAGAAGACCCTGG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 1 4 4 110 2L 5984934 5985037 CATTCATAGAATTGGTCGCGG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079228 2 1 2 80 2L 6012035 6012055 GTAATGGTGCACAACTCTAGG 58 6011925 6011995 CTGTAGGTTTCCTTCGTACTG 58 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 2 2 2 137 2L 6051897 6051915 AAGACTCCAGGTCAGATGC 59 6052012 6052091 CACATATCGGTACTTCTCTTCTG 58 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079196 1 1 3 146 2L 6101786 6121781 GTTGATACTGAAGCCACAGAG 58 6121889 6121907 AATCTCCTCGACGCTAACG 59 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386 1 1 3 80 2L 6766634 6766652 TCCATATAGTGCCGGTCTG 58 6766513 6766592 GGTGAAGATACTTGAAGCTGC 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 1 5 5 80 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961817 6961899 CGTTCATCAACCACATGCT 58 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 2 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Chrac-14 FBgn0043002 FBtr0100267 3 1 2 60 2L 8438429 8438447 CGTAGAGACTTTGGAGGGC 59 8438533 8438552 AACCTGATGCAACCAAATCG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 1 3 3 70 2L 8450794 8450812 GAGACTATCGAAATGCGCT 57 8450677 8450695 CATTGTTATGCCCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0079691 2 1 3 99 2L 8663100 8663118 GACAACTTCGGAACACTGC 59 8663242 8665455 TGTTTACAGCCTTCTTGACG 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 1 4 4 80 2L 9154695 9154714 ATGACAGGACCCATTAAACG 58 9154756 9156507 CACAAAGTATCGCTCCTTCC 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 3 5 5 80 2L 9537735 9537818 GATTATTGCTACGACAAATGCG 58 9537855 9537877 GTGTTTCTTAGACTTGGTCTGTG 59 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 1 5 5 80 2L 10297752 10297773 AATCGAGGTAGAAGACGAATCC 59 10297595 10297713 CAAGTAAATAAGCGTACGCCA 59 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 3 2 2 119 2L 10339600 10339618 ATCTGCGTAACATCAGCAG 58 10340231 10340324 ACATACTGCTCTCACTTAACAC 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169 1 1 4 84 2L 10969008 10969026 CACCCTATAACCACCTGCC 59 10968877 10968965 GGACTGTTGATATAGTGTTGAAGC 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 1 2 5 170 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278895 11278917 CTGTGACTTGAATACTTGAGGAG 59 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 1 2 2 80 2L 12131333 12131353 TACTGACCTATATGCTGCTCC 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899 2 1 2 98 2L 12433698 12433842 CGCTTAAGGTCGACAATCTC 58 12433619 12433638 CCCTGGGTATGTAGATGTCC 59 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 3 1 2 108 2L 12678847 12678866 AACGAGCAACACAAATACAC 57 12678937 12680790 CATGTGCCGCATAAATGTG 58 NA Nonspecific Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080395 1 1 2 80 2L 12695146 12696270 TTCGAAGAGGATAAGATGGGC 59 12696312 12696330 GATGCCAATCAGGTTGCTC 59 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 3 2 2 72 2L 13668754 13668772 CATATTCCGTCCGGAACTG 58 13668866 13668884 CACATAGTCCTCCACAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 1 2 2 80 2L 13829395 13829413 CGAGACATACACCTTTGGC 58 13829264 13829352 GATAAGGCAATCTGGGTTCG 58 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 2 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300935 3 1 9 96 2L 15259283 15261729 CAAGTGGAAATTAACACAGGC 58 15259207 15259225 GTAGATCCGACTCGGTCTG 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 1 3 3 82 2L 15958577 15958709 GACTCGAGCATATGTCTGG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 2 2 2 79 2L 16247175 16247260 ATTAGAGATAAACGACGCGG 58 16247115 16247133 TTTAGTCTCGCCTTTGGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 1 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 3 2 3 197 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511263 16511281 CATGATAGCTCATCGGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 3 3 3 80 2L 16666840 16666932 CGTATCAACTTATTTCGGAACG 58 16666781 16666801 CCTCCTCAAAGTAGCTTATCC 57 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938 3 1 2 81 2L 16702251 16728203 ATCGAATATGGATCCTCGTATACC 59 16702193 16702212 ACATTGGGAACAATTGTGGG 59 NA Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0114502 1 1 2 114 2L 16905388 16905510 GGCTTAAATAAAGTCCACAGCA 59 16905585 16905668 CACCGTATTCGAATTCCGG 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 1 5 5 80 2L 17442578 17442665 GATACGCCATATCGTCCTC 57 17442516 17442536 GTTGATCTCCAGTGTACAGAC 58 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080996 3 1 2 80 2L 17489896 17496749 AATTTCATCAAGCAGGAGATCC 58 17489837 17489855 ATGTTTAGCCACCTTCCGA 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 1 4 12 112 2L 17717920 17717939 AGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 3 2 4 177 2L 18475269 18475346 AGAAAGATGAGGTACCATTGCT 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0113042 3 1 2 112 2L 18698744 18698842 GCATTCAACGCATGGAGAG 59 18698916 18698936 CTTCAAGGTGCTATGTTTCCC 59 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 2 2 3 95 2L 18965176 18965269 ATGAATGCGAGATTGCACG 59 18965099 18965120 CTGACAATAGTGCAATCGAGAG 59 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 3 4 4 81 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391896 19391914 GCTTGTCAGCTCTTCAGTG 58 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 2 4 4 80 2L 19391955 19392075 TCAACTGCATCAATATCGCA 58 19391894 19391912 GTGCTTGTCAGCTCTTCAG 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081210 1 1 6 80 2L 19410631 19426214 ACGATTTGGATGCTCTATTAGC 58 19410572 19410590 CAGTTCCATATTGCGGCTG 59 NA Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 2 2 2 182 2L 19496696 19496715 GCGAATAACAAGTCTACCCA 57 19496860 19496969 GCCGAAGTTCTTAAAGTGC 57 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 3 2 5 196 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339325 20339345 TAGGGTGTCAGCTCATATTCG 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 1 5 5 82 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 3 2 2 137 2L 20660382 20660465 CAAGTTCTTCGATGTGGACAC 59 20660265 20660283 AAATCCGGCGTATAGGTGG 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081410 2 1 2 100 2L 20758656 20760537 AAACGAAGAATGTCTCGTCAC 59 20760599 20760617 CTGATGGTTCCTCCCTTGG 59 NA InUTR Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 1 2 2 80 2L 21079111 21079300 GTGCATTATAGATCTCAGGAGG 58 21079341 21079359 AACCAACTTATGGAAGCCG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0081526 2 1 13 96 2L 21287937 21287957 ATCAAATTCACCTTCCGTCAG 58 21287714 21287879 CAAACTCAAGGGCGATGTG 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 1 3 3 161 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 3 3 6 103 2R 2039490 2039582 ACTTGATGTTACCGAGGACTG 59 2039407 2039425 TGTAGCTGTGATTCTGCGA 59 NA Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 2 2 2 60 2R 2555832 2555851 TACAAGGAGGAGTACGACGA 59 2555871 2555892 ATATAAAGTACTGGTGGAAGCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30160 FBgn0050160 FBtr0086178 2 1 1 60 2R 2893402 2893420 GAGTTCGTCGATTTCTGGG 58 2893444 2893462 CGATGATCAGACTGCTCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111049 2 1 59 91 2R 3243942 3249237 GATTGGTCATCACAGAGCC 58 3243869 3243887 GGAGCTATTGGATTTGGCC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084 2 1 59 80 2R 3241115 3241134 GAATGCTGTCCACCAATCTG 59 3236464 3241077 CGATGAACTTGTACCATCTAAAGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111053,FBtr0111056 1 2 59 80 2R 3219877 3228461 TGATTGTGAATGTACCTCCCA 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 1 3 59 80 2R 3236477 3244494 CCCATGCCAGTTTATAGATGG 58 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0300481,FBtr0300480 2 3 8 91 2R 3362871 3362952 AATAAATGCAGGAGATCGGC 58 3361301 3361320 GTTGTGATGTGAAGATCCCA 57 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 1 3 3 81 2R 3390023 3390042 CGACAATCAACCGTGTATCG 59 3390086 3390157 CTTTGGCATTCGACACTCC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088914,FBtr0088915 3 4 6 100 2R 3538702 3538780 ATCACTCGAAACGGATCCT 58 3538844 3538862 TATTGCTCCGGAGGAATCC 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 1 2 5 85 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575727 3575747 CTTTCGTCTCCAATTTGACCA 58 NA Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 2 2 2 118 2R 3718955 3719035 CTACCAAGTGGAGTACGCC 59 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 1 1 1 60 2R 3811187 3811207 CACCCACTTTGAATGAGTACG 59 3811091 3811109 TCTTCTTCGGATTTGGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273326 1 1 4 117 2R 4376854 4408631 GACTTTATTAAAGGGTCCATCAGC 59 4376760 4376779 GTATGGATGTGACCGAGGAG 59 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301191 1 2 3 80 2R 4898914 4900535 ATGAGCTGGACTTGATACCG 59 4898853 4898871 CCAAGACACAGGAGATGGA 58 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 2 3 3 106 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021270 5021359 CGATTATCGGTCGCTTGAC 58 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 2 2 2 81 2R 5046965 5047046 TTGTATTCGATGGAGTGATGAC 58 5046905 5046923 AAGAATGTGTAGTCCCGCA 59 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 3 3 3 80 2R 5468500 5468579 CTACTACGAGGGTTCGGTG 59 5468620 5468641 GGATGATCTCCGAAATAGAGCA 59 NA Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 1 3 3 80 2R 5651159 5651179 AGCGTCATTAACGTGATTGTG 59 5651220 5651302 CGAGTGCTCATCAATCATGG 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 1 2 2 80 2R 5772394 5772475 TACGGCAGGTCTATTCTTACG 59 5772334 5772355 ATAGTATCCAGACTGTGGACAC 59 NA Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 3 2 2 80 2R 5786777 5786865 CACATGAAGGTGATGTGGG 58 5786715 5786736 ACACCTATAGAGCATGTAGAGG 58 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088447 2 2 5 101 2R 5805513 5805531 TCTTAGCGTACTGAGCCAC 59 5805024 5805448 TACTTATCGTGCCCTGGAG 58 NA Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 3 2 2 80 2R 5915135 5915217 GGAACCTCAAAGTGAGAGC 58 5915261 5915279 TAAACACCTGTTTCCCGAC 57 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405 3 1 2 99 2R 5970822 5970917 GTCCGCAAAGGTGAATCTC 58 5970980 5970998 CCATACTTCCTTGGTGACG 58 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 3 3 3 81 2R 5982411 5982429 CGATCTCATCTCCGGAGAC 59 5982473 5982562 TGAGGCACCACATAGATAGC 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438 3 1 4 91 2R 6120801 6120900 CAAGTGAAAGTGCCCAGAG 58 6120728 6120746 CCGATATACGTTGGACCAC 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 1 10 17 80 2R 6182434 6182453 CAGGTCATTCGTCTGTTTCC 59 6182814 6183256 GTTCTAGATTCCCGTTAAAGATGTC 59 NA Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198 2 1 2 82 2R 6792309 6792327 GAATCATCGGCTATTGGCG 59 6792371 6792512 CTGGGAAAGGATTTCATCCTG 58 NA Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 1 2 2 80 2R 7219880 7219953 AAAGATCAAGACATCCGTGC 58 7219995 7220014 ATTGCAGCGTTATCTGTTCC 59 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 3 2 2 81 2R 8373045 8373064 TCAAGGTACCTGCATCACTG 59 8373103 8373192 CGTAATTTAGTGATGAGTACCCAC 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845 2 1 2 95 2R 8541555 8541642 ACCAGCAGAATCTATTCACTG 57 8541699 8541717 ACTCCTTTCTGTTGTCGAG 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 3 2 8 97 2R 8561427 8563643 GATAATGCCAAGCTCAGTCAG 59 8560791 8560809 GCGAACATGTCGAATAGCA 58 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644 2 1 2 137 2R 8622497 8622515 ACATACAGATCTCGCAGGG 59 8622615 8634123 CGCATTGGCTCTTATCACAG 59 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302645 2 1 2 112 2R 8622614 8625950 GCTGTGATAAGGATGTGTTGG 59 8634128 8634146 TTCCTTCTCGAACGTAGGC 59 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302645 3 1 2 115 2R 8622518 8622536 GGATTCAGTTGGTCCACCA 59 8622613 8625949 CAACACATCCTTATCACAGCC 59 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507 2 1 2 80 2R 9029314 9029615 GTTAGCAAACGAAAGGTCG 57 9029657 9029677 ATTTGAAGGACTTCTCCTCAG 57 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705 2 1 6 81 2R 9331010 9331030 TTAGCCCTCAAGATCATCCTC 59 9330624 9330967 CTCGATTGGCCCTAAGAGG 59 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0087669 3 1 2 104 2R 9394291 9397307 AAATTTGGATTCCCTAGACGAC 58 9397372 9397390 GCTTCGATTTCCATGTGCT 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 1 9 15 127 2R 9759583 9759601 ACCACAAGGAGTTCATGGA 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 1 4 4 97 2R 10059940 10059958 CTACTGGGTCACGTTTGGA 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 1 3 8 81 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 1 3 3 157 2R 10116659 10116677 TTCGGTATCTGCATTGCCT 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574 2 1 2 98 2R 10122019 10122037 ATAAGTTGTCGGAATGGCG 58 10121839 10121960 CATCTTTGGTTTCGACAATCTG 58 NA Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404 2 1 2 124 2R 11088420 11088501 TGTCGCAGATGATATTCTTCG 58 11088316 11088337 GGTTATGGATAAGGCAAATGTG 57 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 2 4 7 92 2R 11652754 11660560 ATAATGTGTACCGAGGTGC 57 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 3 2 5 80 2R 12020078 12020099 ACCTTCCTTCATCTATCTAGGC 58 12020138 12020351 CCAAACTTGTACGAGATGTCG 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 2 3 5 81 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443119 ATTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 2 2 2 124 2R 12473798 12473817 AGAAGATCCTCAGCTCTGTG 58 12473904 12473922 CATCGAGGAGAGCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 2 3 3 80 2R 12509259 12509278 ACAATCAATATGCTGGGCAC 59 12509319 12509407 GGATACATGGATTAGTGCGTC 58 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 2 3 4 85 2R 13309439 13311167 CCAATGGTCACATCGATGAC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 2 1 2 77 2R 13345338 13345357 TTAAGAGATCCACCGATCGA 58 13349518 13349536 GGCTCTTAGGTATTCCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 2 3 8 82 2R 13408430 13410372 TAATGAATCTGTGCGGTCC 57 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 1 2 8 81 2R 13408423 13411599 GAATCTAACCGGTCCTAAACTC 58 13408363 13408383 ACAGTATTCAACGGCATTCAG 59 NA Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 1 1 1 156 2R 13553641 13553659 AACTTCAACAAAGCCAGCG 59 13553839 13553859 TCAGGGTATTGGGAATATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 2 1 1 60 2R 13613205 13613223 AATCCATGGAGGAGTGTCG 59 13613103 13613124 TTCAGATGCTCAATTGTCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 3 2 4 80 2R 13619710 13619730 TAAGTACATCGACATGTTCCC 57 13619769 13619859 CGGATATAGTCCAATAGTTCGT 57 NA Nonspecific Drosophila melanogaster 61 grh FBgn0259211 FBtr0299707 2 1 7 200 2R 13705039 13705057 ACCATGGTCACCATCTCAC 59 13705220 13708518 CATTGAGCTTTCCACTCCAG 59 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614 1 1 3 107 2R 14007894 14007981 AACAAGAAACCAAAGAAGAGGG 59 14007808 14007826 GCTATTCTCCTCAGCTGCA 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 3 3 8 80 2R 14311923 14311941 CATCACCGTCTGGAAGGAG 59 14311985 14312388 GTGCGTTGGTATACAGTGC 59 NA Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 2 2 2 124 2R 14547588 14547606 CTTAAATTGTCGGTGGCCA 58 14547427 14547503 TAAATTGAGCTTAAAGGCAGCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 3 4 4 152 2R 14646792 14646903 GTCTTCCGCAAGACAAGTC 58 14646658 14646680 CCATATCCGTAGGAGATATTGGA 58 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631,FBtr0086630 3 2 2 207 2R 14710917 14710935 TTTGATCCCAGAGTGGGTC 59 14710665 14710746 CTTCATGGGTGGATCTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0300482 2 1 3 81 2R 14913435 14913454 TACATTATTGCCAGGAAGCG 58 14911876 14913391 TGGTGCGATAGTCAGTCTC 58 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 1 2 3 89 2R 15316015 15316036 ATTCGAGTGTTCTCAGAAACTC 58 15316778 15316854 TCCTGGCGTAATCGTATCG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 2 5 19 97 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361463 15362042 CGATCCACTGTTTGTCTCTG 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 1 3 3 93 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148397 ATGTTCTTGGTCTTCGAATCG 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 3 3 5 88 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212015 GTTGTTTAGGGAGCTAGCCA 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 3 2 15 82 2R 16908770 16908788 CTTCGGATCACAGAACCAC 58 16909016 16910578 CCGTAACAATTGTCTGATGC 57 NA Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 2 2 2 101 2R 18183291 18183367 TACGACGCATACGAGATCTC 59 18183431 18183449 CATCTTCGTAGGAGGGCAG 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0113107 3 1 4 116 2R 18226391 18226409 TTCTCTGGTGACACCATGG 59 18225405 18226313 GTAAATAAGGTATCGTGCGGG 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301188 3 1 4 82 2R 18291899 18291918 CAAGCAACTGAAATGAGGCA 59 18291963 18294538 TGGTAATTAGTCCGGGCTG 59 NA InUTR Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 1 3 4 80 2R 18955643 18958139 GCTCCAAATAGTGCCATGG 59 18958182 18958201 GTACAGGGTCATGTTCTTGG 58 NA Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 1 2 2 60 2R 19246473 19246493 GGAGGAGTTCTTCTACAAGCA 59 19246575 19246593 CTCCGTCTTGGTCTTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 2 4 4 112 2R 19275104 19275122 CACCTTCGACAACAGAAGC 59 19275257 19275275 TTTAGTCTGTACCTGGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 1 2 2 93 2R 19873906 19874867 ATTCCCAGATCGTATACGCT 58 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 1 2 2 86 2R 19924653 19924731 GTCAACCGACTAACCACCT 59 19924585 19924603 GACTGTTTCGCAAGTCGAG 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391,FBtr0072392 3 2 2 120 2R 20826339 20826357 CTTAAAGATCGGCCAGCTG 58 20826554 20826572 GTCCTCATTGTAGTTGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0072411 2 1 2 179 2R 20828953 20829781 CAAGCAAAGAAAGTCTCCTCC 59 20828794 20828812 GAAGGGAATGTTGTAGCGG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302575 2 1 8 81 2R 20879379 20879398 CGAGGACATGATTGAATCGC 59 20879206 20879335 GGCTACTTGTATGGAGCGT 59 NA Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 2 1 1 61 2R 7754868 7754886 TGAGTCTGAGGTCGTACGA 59 7754983 7755004 CCTCAGAACAAACTTGTTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 1 9 9 80 3L 143207 143522 TTGTCCATACGCCAAATCG 58 143565 143584 TGTTCTCAATAGCTTCCGAC 57 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 2 5 9 119 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072526 3 1 2 125 3L 212540 212618 GAAGAAATCATAAAGCAGCGC 58 212370 212453 CATGATGGGATTGCTGTCC 58 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486 3 1 3 160 3L 212773 212851 CCATAGCCAAGTAATGTCGG 58 212974 212992 CCGATAGGTCTTTGCTGGA 59 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 3 3 3 115 3L 679820 679907 AAGAATTTAGCGACCTGGC 58 679723 679743 CGTTTCAACCATTTAGCTACC 57 NA InUTR Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 2 7 12 132 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463163 2463181 CCTTGAATAGCTGCTGGTG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 1 4 12 60 3L 2461243 2461262 AAATGCAACGATAGATGCGG 59 2465116 2465137 AAGAATGCTCTTAAGTGGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072963 1 1 4 87 3L 2500449 2501077 GAAGACACGTATCCCTATGAGG 59 2500383 2500401 AGATGATGCCGATCTTGGG 59 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 1 2 5 147 3L 2558030 2560128 ATCCAGTGAGGAGAAGCAG 58 2557901 2557919 ATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 3 2 5 148 3L 2558031 2560129 CATCCAGTGAGGAGAAGCA 59 2557901 2557919 ATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072956 2 1 5 197 3L 2564418 2564436 ACGATGGAACTCTATTGGC 57 2562828 2563820 TGTTCTGCTCTAGTTTGCG 58 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0273190 2 1 2 124 3L 2660120 2660200 TGTTGGAACTTTCCTCTCG 57 2660288 2660306 AGATGAGAGCTAGACCCTG 57 NA Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 3 2 2 107 3L 2783377 2783395 CTTGGAGAAGCGAATGTCC 58 2783466 2783747 TTCTTGCGACATAGAGGGT 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 3 7 13 128 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593424 3593444 CGAATGGTACTTCATCTCCTC 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 1 7 13 127 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 2 2 2 173 3L 3908526 3909016 GAACTACGATGATGAGCCC 57 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0113138 2 1 2 188 3L 4363117 4363756 CGAAATTATTGGCAAGCGGA 59 4338104 4338122 GATCGCGTAAGAAGTTGGC 59 NA Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 3 3 3 103 3L 4369894 4369913 CGGTATACACCTTCATGTGG 58 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 2 5 5 93 3L 4505302 4505412 AAAGTTTGAACAGGTTCGCA 59 4505228 4505251 GGTAGAGCTCTTTATGAGATTTGC 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112714,FBtr0112709 1 4 8 159 3L 5724590 5724608 ACCTCCTTTGTGGATCCTG 59 5724731 5727578 ATTTCCGCGTTTCTTGCTC 59 NA Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 3 1 1 71 3L 5771080 5771098 ACAAACCAAGGCAAATCCC 59 5770969 5770987 TACATGAACGTACCTGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 2 2 2 67 3L 5788652 5788671 CAGGATTTGTCCAAACAGCA 59 5788199 5788217 AGATTCTCGTACGTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 1 2 2 104 3L 5798503 5798580 GAGATCCTATGGTCGGTCG 59 5798648 5798666 AAATTCAAACCGATCCGCC 59 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299616 2 1 2 113 3L 5796512 5797327 ATAAAGAAGTAGTCGAGCGC 57 5797403 5797421 TGGGATGAACATACTGCAG 57 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 3 2 2 84 3L 5810733 5811005 CTCACCAGTTCACTTTCCC 58 5810667 5810685 CCTACAGGTGCCATTATGG 57 NA Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 3 1 1 63 3L 6156747 6156765 TTATGGGCATTCCCTTCCT 58 6156920 6156938 AGGTGACACATGTAGCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 1 4 4 80 3L 6683421 6683501 CTTCTTTGGATTAGGCAAAGG 57 6683361 6683379 GACCAGAACTCCAGTTTCG 58 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957 2 1 2 83 3L 6710490 6710508 TTGAGAGCGTTGAACAGGA 59 6710041 6710444 GACCGTAATCGTTCTTGGTC 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301108 1 1 11 171 3L 7042048 7043274 TTCTCAATACGCCAACGTG 58 7043785 7044350 TTCTGTACCCTGGATGAGAG 58 NA Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870 3 1 2 171 3L 7369001 7373731 CATGAGCTTAGGCTACTCG 57 7368848 7368866 TAGTGAGCCGGTTATTTCG 57 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089849,FBtr0089850 3 2 3 87 3L 7610693 7612896 CACAGTCTAGAGACCTGCG 59 7612947 7612965 AATAGACGCCACTGGTCAG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 1 3 15 121 3L 7689772 7689790 AACTACAGAGTCGACCCTC 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 1 3 3 80 3L 7759493 7759571 ATGAAGAGCTAAGGCAAACG 58 7759432 7759451 GCAACCATATCCACTGTTGG 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 1 2 4 80 3L 7926883 7928489 ATGTCGGAGAAGAATGAACAG 58 7926287 7926306 GATCATCCGCTCAAATTCCT 58 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 2 5 5 124 3L 8097909 8097988 TCTTCTCAAGGTGCATCTG 57 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 1 1 2 190 3L 8195782 8195800 AGTCAAAGACGTTGTGCTG 58 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 2 2 2 69 3L 8397145 8397215 TTAGCACTGAAGGAGAGCG 59 8397094 8397112 TATGGAACAATGGTGGCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273286 3 1 7 161 3L 8899544 8899564 AAAGTAATGCACATCCATCGC 59 8899229 8899363 GGCCAGAGGATGTGTAAGG 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527 3 3 5 110 3L 9069794 9069812 CTGGACAGCTTTACAGCCT 59 9069883 9069966 TAAACTCAGTGGAAAGTTCAGC 59 NA Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 1 1 1 120 3L 9129896 9129914 AAGAAATAAGGCAGCTGCA 57 9129700 9129718 CTTCCAGAACTGGAGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0110843 2 2 3 93 3L 9657337 9660813 CTTGAGTTTGAGCTCATCGC 59 9657263 9657281 CAGTTTGTAGAGCGCTTGG 59 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416 3 1 2 116 3L 9682385 9682403 CCTTGCTTTCCATATGCCC 59 9679555 9681641 CGCACGACTCCTAAATTTCC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 1 1 2 118 3L 10405983 10406001 GCCTCCAATACGATTCGTG 58 10406143 10406161 CCGAGAATTCCATTTCGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 2 4 4 99 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600360 11600378 CATTGTAGTGTGATCCGCG 59 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300726,FBtr0300097 2 2 3 83 3L 11684343 11684425 GAGCAGCAATATAAATAGTGTCCTC 59 11684284 11684305 TTTCCATTGTGAGAAGATTGGG 59 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 3 1 1 60 3L 11788070 11788090 CCAAAGTAAAGCTTCAACCGA 59 11788167 11788189 GAGAGTAGGCTCAATGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 1 2 4 93 3L 11872544 11872616 CCGATCCATTGCTCATGTG 59 11872670 11872691 GCACAAGCCATATCTAATTCCT 58 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089322 2 1 3 182 3L 12494122 12494265 TTTAAAGAAGTCTCGCTGTGAG 58 12493887 12493981 TATATGTCCCACAGCTTTGTG 58 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 3 3 3 133 3L 12820166 12820185 TATCCTGTTCGTCTATGCCG 59 12819718 12820072 CTTTGGAAACCAAGTAGGTGG 59 NA Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075811 1 1 2 176 3L 13489234 13494005 CAGTTGCACTCAGAGATGC 58 13494145 13494163 CGACATGTCAATGGGACTG 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 1 7 7 80 3L 14407794 14407882 GGCTAAGGAAATTACGATCCA 58 14407734 14407755 ATTCGATCACCCTTCTTTAGAC 58 NA Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075633,FBtr0075632 3 2 2 60 3L 15090443 15090462 GGATGAGATTGCCATACCCT 59 15090485 15090503 ATGCGGTTCCTTTAGAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0075606 2 1 4 131 3L 15486663 15487042 AACGTACAAATGGTTAGATCGC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA InUTR Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075569 1 1 4 89 3L 15598300 15598318 GTCTACTAAGACCACCGCC 59 15598371 15599767 TGTTGCCAACCGAATTGAC 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540 1 1 4 83 3L 15815227 15815245 ACTGTATCCTCGAAGCGTC 59 15815106 15815182 GACAATCTGCTTCTCATTGCT 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 2 3 4 84 3L 15815228 15815246 TACTGTATCCTCGAAGCGT 57 15815103 15815181 GCTGACAATCTTCTCATTGC 57 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 3 3 5 81 3L 15857119 15857139 TTATATTGGTGACGTCGTCCT 59 15853117 15857076 GTTGTCACGCCTATCATCG 58 NA Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 2 2 2 104 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274835 16274854 ATGGAAAGGAAGGAGACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 2 2 2 87 3L 16372427 16372445 CTGCACTACTTGGTCACCT 59 16372298 16372378 TGAGGCTATAGAATCCTCCCA 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 1 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 1 3 3 126 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748797 17748818 GCATAGATCAGCTTAATTCCGA 58 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086 1 1 2 161 3L 18756953 18790645 ATAACGGAGGCTACCAGGA 59 18756810 18756829 CATTATTGCCACTGGAGCTG 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075005 2 1 12 96 3L 19298642 19298847 GTATTACTCGGGCTTACATGC 59 19298566 19298584 CGTGAAATTCCGACGAACC 59 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 2 3 3 82 3L 19789420 19789440 GGCCACTATGACAGTAATGAC 58 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 1 2 6 85 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851537 19851555 GAGTCCCAAATTCTTGCCG 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 1 6 6 90 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853562 19853580 CATCCTTCCTCTTGGGCTC 59 NA Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074900 1 1 2 185 3L 19987827 19987918 GGATTTAAGCAAGATTGCCC 57 19988485 19988506 GCTTGAAGTTACATCTATTGCG 58 NA Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 3 2 2 95 3L 19989982 19990001 CTTAAGGACTGCCCTAGTGG 59 19990059 19990139 CTCTGCAAACTTGCTAGCG 59 NA Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 3 2 2 81 3L 20296381 20296400 GATCATGGTCAACCGAAGAG 58 20296443 20300947 CCAATCTGATATGGCGTCTG 58 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0273280 1 1 2 83 3L 20347432 20347450 ATACCTTCTGCGTGGATCC 59 20347491 20348414 GTAGGTGTATCTTAAGTTTGTCTGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616 1 1 4 87 3L 20958849 20959240 GAGCTGGATAAGGCTACCC 59 20958780 20958798 ATTGTCGCAAAGCACACTG 59 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078313 2 1 5 82 3L 21193149 21193168 CCAAGTCGAGTCTCTACGAG 59 21192427 21193104 CTTCACGTGCATATGCTCC 59 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0112677 3 1 3 91 3L 21313649 21313668 GAAAGACCTCCTTCCTGGTC 59 21313722 21325711 CACTTTGTTCGTAAGCGCA 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 1 3 4 116 3L 21488958 21489528 AAGTGATTCTGTGCAGCAC 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 2 3 4 117 3L 21488959 21489529 GAAGTGATTCTGTGCAGCA 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 1 3 3 80 3L 21562488 21562506 GATCGTGCCTTAAGTTCCA 57 21562550 21562636 GATCTCGCTGTAGGATACG 57 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0301364 1 1 5 81 3L 21908047 21908067 GTGTCTGGTACAACTAATGCA 58 21908107 21908232 CTTTGCCTACATCATTGAACTC 57 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 2 2 2 80 3L 22062292 22062491 AATTGCTTTGTGTTAGGCGA 58 22062231 22062250 TTGATCCAGGATTCCATTGC 58 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 2 3 3 83 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718716 ATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0078565 2 1 2 81 3L 23017257 23022944 CGCCAGGATAAATTACACGAC 59 23022982 23023005 GAAATGGTAGATTCTCATACTCGC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 10 10 92 3R 561271 561375 CGATCTGCATGTGAAATACGA 59 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 1 2 2 92 3R 1081335 1081415 ATATTCCAGGAGAAGCGGC 59 1081261 1081279 TTTGATCGTCTGCTAGGGC 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 3 3 3 80 3R 1392053 1392072 AACTCTAATGCGAAGCTCAG 58 1392114 1392201 CGTCTCCAACTTGAAGAAGG 58 NA Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 1 2 2 88 3R 1661658 1661742 CGGCTATGATAATTTGTTTGGG 58 1661791 1661809 GTTTCCGGCAGATATCTGC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 3 1 1 78 3R 2125194 2125212 CAGTGGAGTCACCTTCCAG 59 2125720 2125738 ATAGACATCCTGCTCGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 3 2 4 83 3R 2479834 2480202 CTGGATGAAGATCTCCAATGC 58 2480247 2480265 GTTCTCGTCTTCGGAGACC 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 2 4 4 80 3R 2536680 2537244 GATGATCAGTCCGATAGTAACTC 58 2536622 2536641 GGAATCGGGTATATCATCGG 57 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 1 4 5 82 3R 2582674 2583204 GACGCTACAGATCTTGGAG 57 2582610 2582628 TTATTCCGGTGCTCATGTC 57 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0113203 1 1 5 86 3R 3693815 3693833 CATCACACGATGATGGGTG 58 3691470 3693770 CTCATGTAGAGTAGCTTCTTTCTG 58 NA Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091720 3 1 2 113 3R 4069825 4069843 AGTTCCGGAACGTAGTCTC 58 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081921 3 1 2 82 3R 4650601 4650684 GCTTGACACGGATCATCCT 59 4650728 4650748 TGGACTTCTTAAAGATCCCGT 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 1 2 5 98 3R 4858901 4858919 AAGAAGCGCTTTGGATTGG 59 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 3 4 4 93 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871871 4871889 CATTGCTGTATACAGGCGG 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 3 3 5 153 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044343 5044361 GACCAGGTGTGATCCTTCC 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 3 2 2 76 3R 5121440 5121458 TTAGTGAACTGTCGACCGT 58 5121248 5121266 GCAATACGTTTGTGTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082051,FBtr0082052 2 2 4 98 3R 5216678 5216697 GATAAGTTGACCCACCTCTC 57 5199589 5216617 GTCGGTGAGATGATTCAGG 57 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 1 5 14 95 3R 5258552 5269741 TTCAGTTCCGGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 1 4 4 80 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592836 5592909 ATCATGTTGTGCAGATGCTC 59 NA Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082313 3 1 2 81 3R 6579540 6579771 CTCGAATCACATACTGACCTG 58 6579479 6579498 CCATCATGGTCAGGTAAACG 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 2 1 4 82 3R 6597112 6597132 AAATCCTGTCCGTCATATTGC 58 6595017 6597071 ACTCGGCATCAACATATTTCAC 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 3 4 4 82 3R 7613663 7613756 AGTCTATGACCTATGTGACGG 58 7613800 7613818 CTCACTCATGTTCTCAGGC 58 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 3 2 2 82 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617676 7617697 ATAGTCTACGGGAATGAAGTCC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 2 4 4 73 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646922 7646941 TATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 2 3 4 83 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338672 8338691 CGATCCAGAATAACACCACC 58 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 2 3 3 178 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795022 8795040 GATCGAACTCGTACTCGCA 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 2 6 6 80 3R 9204502 9204740 TTGCCCTACATCTACAATCCT 58 9204442 9204462 GTCCAGTTCACTTACATCGTC 58 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 1 3 3 85 3R 10126664 10126683 AAATGCATGAACGACTTCCT 58 10126731 10126958 CTGACCAGGTCCTTAGAGC 59 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 3 3 3 99 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142581 10142671 CAAGGGAACTCCTATTGTGC 58 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 2 2 3 112 3R 10418461 10418479 AATTCTTGCAACGAGACCC 58 10418555 10418734 GATTTGCTACTTGTTGGCG 57 NA Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 1 2 2 91 3R 10441512 10441591 TGTCAAACCTCCTCTACATGG 59 10441643 10441662 ATTATCGTTGTCCATGTGGC 58 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 2 3 3 112 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452026 TCAAGGAATACCTTTAGCACAC 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 1 5 6 85 3R 11024796 11024814 CATTCGGCACAATTTGTGC 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 2 2 2 80 3R 11229213 11229231 GCATTGTTCTCAGCATGGT 58 11229095 11229171 TGGATTCATGCTGTTTAAGGG 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 5 5 83 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723136 11723282 CTTTCAGTTGGTTGTAAGACTCC 59 NA InUTR Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 4 5 194 3R 11723421 11723504 AGCTAAGTGGAAATGCTCG 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 2 2 2 60 3R 12260765 12260788 GTCGATGAGTATTATACGACAACC 59 12260866 12260885 CCAAATTAGCAGTCACCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 1 1 1 70 3R 12309015 12309033 ATCCTACACTGTCCAACGG 59 12308907 12308925 GTGCTCATTGAAGAGACGT 57 NA DesignNoJunction Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 2 5 5 80 3R 12755406 12755424 ATGCGTATGTTTCCAAGCA 58 12755287 12755364 GGAACCATATCTTGACCTGTC 58 NA Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 3 2 2 82 3R 12805119 12805209 ATCCTGGACAGTCTGAAACG 59 12805056 12805074 TTTCCCACATCACCGTACC 59 NA Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 1 2 2 167 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115418 14115495 CAATTCGTTCTCCTGCAAGG 59 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 2 5 5 113 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132726 14133185 GATACAGGATGGGACTGGC 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 1 5 6 80 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229686 ACATCGCGTATCTTGACAC 58 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 2 5 5 84 3R 14585654 14585785 CCTGAAAGATCCGGACTGG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 3 5 5 85 3R 14585655 14585786 ACCTGAAAGATCCGGACTG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301693 2 1 3 90 3R 15061293 15062559 GAACCCAGATGGTCATATCCA 59 15061223 15061241 TGACTCCTCCAGTTCTGTG 58 NA Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 2 2 2 80 3R 15697097 15697118 ACATGAACTATTTATGGCTGGG 58 15696708 15697056 AGGCGGAGATACCAATCTC 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 3 4 8 89 3R 16144000 16144712 CCTACAAAGAATCGCAAATTGG 58 16145299 16145317 TTCCTGTTGAGTTTAGCGG 57 NA Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 1 2 2 88 3R 16333758 16333776 TATTTGCTGGATCCCACGT 59 16333615 16333708 TGATTAACGGCAAATCCAGAC 59 NA Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 2 2 2 80 3R 16479491 16479512 GCCCAATATAGCAACTATACCG 58 16479270 16479451 GTCTGCGATATTCTCACCCT 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510 2 1 9 81 3R 16787948 16787966 GGACTCTTATCGAGTCGCC 59 16788009 16789458 CTTGCGTCTTGACTTGTACTG 59 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 1 3 3 87 3R 16837130 16837658 AATTCAAGGCTACAGTCGAC 58 16837706 16837726 TCTTTGAACTGTTCCTTCCAC 58 NA Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 2 2 2 80 3R 16940757 16940776 AGTTTCATAGAAACCTCGGC 58 16940817 16940986 AATGCGATAGATCTCTGTGAG 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 1 2 16 156 3R 16980786 16980965 GCCCACGTCTAATTATGGC 58 16981085 16981103 GATGTCGAAGTCCCATTCG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0114361 1 1 22 142 3R 17180046 17200792 AGAGGCTCAAGCATTTCAC 58 17179922 17179942 GCTCCTTGTAATAATTTCGGC 57 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 2 2 2 81 3R 17231538 17231557 CTGTCTTCATCTGGGATCCA 58 17231598 17231708 AACCAAATCCTTGAAGACAGAG 58 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 3 2 2 88 3R 17566286 17566306 CTCTACACGGCTATTATGGCA 59 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 3 4 6 91 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615472 17616438 CGCACGAATATAAGCACCG 59 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0084139 2 1 2 81 3R 17701285 17701303 TGGCATACTTTGTGTTCGG 58 17701348 17701450 CCATGTCGGAACAGTATGG 58 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 1 2 2 78 3R 17841000 17841018 CTCACGAATATCCAGCCGT 59 17841133 17841151 ACTTCTCGTGCTTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0290271 1 1 2 80 3R 17847983 17848135 ATCACCTACGCCAAATACGA 59 17847922 17847940 CACCTTGATGACGGATCCT 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 2 2 3 80 3R 17957958 17958390 GACCAATCTATTTGAGGAGATGC 59 17958429 17958448 AATTCGGTTATCTCACGCAG 58 NA Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 3 2 2 81 3R 18274273 18274291 ATAGTGCTGGCTATCTGCA 58 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 3 3 3 81 3R 18338653 18338819 GTCGACAGATACTACGCCA 59 18338862 18338882 TCAATAGCATGATGAACACGC 59 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 2 3 3 96 3R 18370540 18370560 TTCCAGCTATTCACTACAGCA 59 18370401 18370482 AGAATGTAGAGGAGGCCCA 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0301491,FBtr0084385,FBtr0084384,FBtr0100227 2 4 6 120 3R 19094008 19094115 CTTTAGTCAGCGACAGCAG 58 19093906 19093925 AAACTGGTGTAACCTTGCTG 58 NA Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 3 2 2 277 3R 19382199 19382217 GCTCCTCCTACTATCCACC 58 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 nau FBgn0002922 FBtr0084472 1 1 2 106 3R 19542085 19542103 CTGCCAGTCCGATTATCTG 57 19538853 19538930 CATCAAAGTCTGTAAACTGACC 57 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 1 2 2 87 3R 19821617 19821636 TATTTAAGTCGCGTCTGCCA 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 5 6 81 3R 20045367 20045387 TGAACATCTACAACGAACCGA 59 20025658 20045326 GGTGGATTCACGGTAAATGAC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 5 6 81 3R 20045367 20045387 TGAACATCTACAACGAACCGA 59 20025658 20045326 GGTGGATTCACGGTAAATGAC 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 2 6 6 82 3R 20082821 20082911 GCACGGTTATCATGGTTCC 59 20082757 20082776 TAGTCGACTGTAGATGGCCT 59 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666 1 2 3 80 3R 20464514 20464534 TTGTGTCCTACACCAGTAGTC 59 20464387 20464477 CATTGTCCACGAGTATCTTAAGAG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100624,FBtr0301582,FBtr0301581 3 3 18 81 3R 20513557 20513576 AGCGTCACTATACCACAGTG 59 20513619 20517192 GCTTCATGAACCTTGACTCG 59 NA Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084702 3 1 2 123 3R 20662828 20662846 AGTCTGACCATGCTCTTCG 59 20662930 20663784 CTCGTCCTTTAACAATTGGGAC 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 2 5 5 61 3R 21451885 21452079 CCAACCTGCTCAAGAAGTG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 2 2 3 187 3R 22886861 22887129 ACAATCCAACAAGGAGTGC 58 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0112834 1 2 12 92 3R 22892850 22892868 TGATGAGGGAGTTGTCCTC 58 22892166 22892339 CGATACTTGGTATCCGATGG 57 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 3 5 5 81 3R 23392371 23392392 CTTGCGATTCATTTACGAAACG 59 23392247 23392331 GAATCCGTTGATGATACTGCC 59 NA Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 1 1 1 60 3R 24857548 24857566 AGGACTTTGTCTTTGCTGC 58 24857439 24857457 GTCTTCTTTACGCGATCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 2 3 3 103 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951602 24951620 CAGATGAGGCGACTATGCA 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 2 2 2 145 3R 25004530 25006888 AGAGTTCGATTATGCCAGTC 57 25004404 25004422 CATAGTGATTGGTGACGGG 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 3 3 5 112 3R 25423020 25423038 ACAGAGACGACATCGAAGG 59 25423186 25423894 CGTTGGACTTTCACATGGT 58 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0085593 3 1 5 143 3R 25871497 25871619 CCAACCTGCTTCAAGATGAC 59 25871311 25871330 TCTGTTGTCGATACCCTTGG 59 NA Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 1 2 2 95 3R 25873358 25873441 GCATTCAGGTATGTGGTTTCC 59 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582 3 1 3 116 3R 25960010 25960029 AGTGGAAGACTTACGAAGGT 58 25959729 25959747 TCATCTTCCAGTTGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 1 3 3 76 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 3 2 4 119 3R 26643824 26643842 GTTATCAGCACGGAACTGC 59 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 2 3 3 81 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986981 26986999 CGATGAGTTTGTCGAGCAG 59 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773 3 1 3 153 3R 27044762 27044841 TTGATACAATAGCCGTGCG 58 27043629 27043648 CTCAATGGTCGCAAGTACTG 59 NA InUTR Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046 3 1 2 81 3R 27186454 27186472 AGAATGGATCCATCCGCTC 59 27186512 27186598 CTGGACATCATTCTAACTAGACCA 59 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 2 4 4 114 3R 27567455 27567473 CAACGTGAAGAACGTGTCC 59 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 2 4 8 80 4 162686 162706 AATATCCTCTACGCCATTAGC 57 162747 162838 AGATGAACCCAACAAGTCAC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 3 5 6 199 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322902 322923 CCAACTGAAGAAATGATTTGCG 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 1 2 4 94 4 585203 585221 CAAATCGCTTTACCGGCTC 59 585275 586044 CCTTTAAACCCTCCATCATTAGC 59 NA Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 3 2 2 80 4 607709 608476 TTGGAGCCAAGTTTCTGGT 59 608515 608538 TGTATTGATCTTCGTCTCCTAGTG 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 3 3 3 131 4 645441 645459 CCAGACTAAAGCACCTCGT 59 645220 645239 CCTGGTTACTTCTTAGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 2 3 5 116 4 886473 886570 CACTTGGCAATAACCGCTC 59 886375 886395 GGTATATCGGATGATAGGCCG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 1 6 6 100 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974433 974453 CTGAAGTAGGAGTAAATGCCA 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 2 6 7 81 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080447 1081041 GTCTGCTTGATGGAACCTG 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100346 2 1 8 99 4 1128880 1128898 GGCAACGATACGTCTATGC 58 1128960 1129114 TAAGCGAACCAATGGAAGGT 59 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 1 4 4 86 X 423498 423516 GTTCGCCAAGAACTTGGAC 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 2 3 8 60 X 550406 550424 GGTCACTATAGCCGTTTCG 58 551147 551165 GATTGCAACTTGATGCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 1 5 6 86 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640606 640626 CAGTATGTGATAGCTGACCGT 59 NA Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 1 2 2 83 X 712813 712891 CGATCCTAACTGTGTTCTGTG 58 712750 712768 GTGTGCATAGAGGAAAGCG 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 2 3 3 156 X 927433 935032 ATATGAGTATCCTCCGAGCAC 59 935150 935168 CGTTTCGCACATTGTAGGG 59 NA InUTR Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070249 1 1 3 91 X 1120307 1127845 TTACCTCGAGAGTCTGGTC 57 1120234 1120252 ATCTGGTCAGCAGGTAGAG 58 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 2 2 2 82 X 1776829 1776848 CAGTTCGTGCATTCGAAGAG 59 1776710 1776788 ATCTTAGATCTCGCCAAGTAGAC 59 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070318,FBtr0070320 2 2 3 94 X 1822530 1822548 CTCTATCCGACGGATGAGG 58 1822602 1823044 GGAATATCAATCTGGTCCATGTC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 1 3 4 80 X 3846007 3846025 GTGCCAATACTAGCTCAGC 58 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 3 3 5 84 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248581 4251088 ACTCAATCGCATCCAATGC 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 1 4 6 117 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848233 4848252 GTCATTAAATCCGCGTCCAG 59 NA Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 1 2 2 80 X 5964739 5964903 GTCTCCTGGTATTGTACTTTATGC 59 5964682 5964700 GGAAGAGAAAGGCGATGGA 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0100208,FBtr0100217 2 3 21 60 X 6973397 6975038 TATCTTTGGTCTCGATAGCGA 58 6973357 6973375 CTTCCTACGGTACAATCCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 1 2 3 93 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7564989 7565009 GATATGTGCAATCCGATCCTC 58 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 3 2 3 103 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7565001 7565019 CTTCGCTGAGGATATGTGC 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 3 2 2 106 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997744 7997829 CGGAATCCTGCTTGTAATCC 58 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 3 2 6 84 X 8478881 8478902 GATGGGTACATCATCTACTGCT 59 8478947 8479851 CGAGCGAAACTGTCTTTCG 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352,FBtr0114596 2 2 5 93 X 8995191 8995209 AGAAAGTCACGTGATGTGG 57 8993482 8995134 CATAGTCGATATGCTGCGG 58 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 2 3 3 106 X 9048444 9048462 ATTTCAAGACCGATCTGCG 58 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 2 2 2 80 X 9468294 9468389 GACCTGGAGTATTACGCCT 58 9468232 9468252 TGTACACAGGCAGATATTCGA 59 NA Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0112972 1 1 2 80 X 9927515 9927533 CCGAAGATTCCGAAGATCC 57 9927574 9934734 GATAACGATTCGTGACAATGTC 58 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 2 2 4 80 X 10120391 10120554 GGTGACCACCTATGATAATGC 58 10120596 10120614 TTCCACGACGAGATCAGAC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 3 4 15 123 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299398 11299416 AAGGTCATCGTTGATGCGA 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 3 3 3 237 X 11322866 11322884 CCAGGGACCCTACTATTGC 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 1 2 4 80 X 11329462 11329480 CGAATCTGGATGATTCGGA 57 11328832 11329418 TTATTGGCGTGGGATACTC 57 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 2 4 4 161 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444960 11445071 TTCAATCCATCTTCTATGCGC 58 NA Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 3 1 1 269 X 11626557 11626575 ACCCTGTTGCTCTACATGG 59 11621316 11621335 ATGTGCTTGTAGAACTGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 1 2 2 110 X 12416749 12417558 CAATTCAGACTCCTCGGCT 59 12416657 12416675 TGTGAAGCACTCTGGACAG 59 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 1 3 3 80 X 12604746 12604845 GCATTCGGATGTTAGTGAATCC 59 12604687 12604706 ATAGCTGACGTTGCATTTCC 59 NA Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 3 2 2 120 X 12671248 12677129 CTTTACAGCTGCACTCGAG 58 12671146 12671164 TGGTTCGGAGTGATAGCAG 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 1 2 4 80 X 13591263 13600186 CGACTATGTGAATGGCTTCC 58 13600227 13600247 TTCTCATCCGTATTCACAACC 58 NA Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 3 1 1 85 X 13613448 13613466 CAACAACGTAAGCTCCCTG 58 13613316 13613335 AGTAGCTATCACTGGAGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0073833 3 1 4 87 X 13727059 13728860 AAGGAGGTGTCGGAATCTG 59 13726990 13727008 CGTCATTGGGAAACTCGAC 59 NA Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 2 2 2 95 X 14087772 14088051 GAATTGGACTGCGACTACC 58 14088110 14088128 GTTGCACATTAGTTCCGCT 58 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0073993 3 1 2 92 X 14989268 14991682 CTAAACTCCTTGAGACTTCCC 57 14991735 14991754 GGAACTAATCGTTCCTTGGG 58 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 3 4 4 108 X 15229292 15229393 ATTCCAGAATGCTGTCAACAG 59 15229463 15229481 CTCGTAGTGCTCCTTGTCC 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 1 2 5 92 X 15272250 15272268 CCTATCGAAGTTCGGAGCA 59 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 3 2 2 113 X 15411720 15413960 CATGCGATACAGGTTCACC 58 15411625 15411643 AAGGAGCTAGAGATTGGGC 58 NA Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059 1 1 2 95 X 15597281 15597299 CTATGTGATCTCCGGCTGG 59 15597108 15597222 TGTTTGCAATGCGTTTGGT 59 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 1 5 5 167 X 15688455 15688539 AAGATCCACGTAACAAAGTTCC 59 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 2 6 6 277 X 15755487 15755506 TATCCGACTAAGCTACTGGC 58 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 2 4 4 80 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896736 15896927 CCTGGTCCAGCTTTAACCA 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 2 5 5 83 X 16178783 16179061 CGACTACGTAGGCTATGCA 59 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 2 4 4 84 X 16193686 16193704 GCAGTGGCTTGATCTTGTG 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 1 4 4 83 X 16193687 16193705 CAGTGGCTTGATCTTGTGC 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 1 5 5 110 X 16276731 16276749 CTAATCATAAGCCGGGCTC 57 16276572 16276660 CGATCGAATTGATATCCTCCTG 58 NA Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 2 2 2 80 X 16444489 16446383 TCGAAGTCAAGGATCTGATGG 59 16444429 16444448 CGTTCTCCATCGGATAGGAG 59 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734 3 1 2 95 X 16554589 16554607 CCTTCCATACGGGATCTGG 59 16554664 16559229 GGATTCCACATTAACTCCGTG 59 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323 3 1 2 89 X 16606048 16607823 AAATTCAAGGCGTCAGCAG 59 16607876 16607894 GGATTCCCTAGAGTGGTGG 58 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 1 3 5 80 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717633 CGATTTAGGCCAGTCACTG 58 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 2 3 3 80 X 17536257 17536344 TCGAAGAGGATACCAATACTGAG 59 17536199 17536218 AGAAGAAGTCCTTCAGTGCC 59 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 1 2 2 112 X 17595800 17596244 TCATGAGTTCGCAATACTCGA 59 17595708 17595726 TAGCACCTTGATGCCTTCC 59 NA InUTR Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836 1 1 5 124 X 17629184 17629202 GATGAACACCGATGTGGAG 58 17629290 17630242 ACTTGTACTCACTCCTGCC 59 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 2 3 4 176 X 17767426 17771465 ATAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 1 8 8 83 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844725 17844744 AATGATGGCGATTATGTCGA 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 2 3 7 93 X 18003568 18003586 TGCGAAGAGTATTACGAGC 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 3 7 9 73 X 18267443 18267464 TCGTACAATAAGATCTTCACCG 58 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 2 1 1 81 X 19072088 19072106 AGATGACGATGCAGTTCGT 59 19071948 19071966 CAGCTCGGTAAGATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 2 3 4 85 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228548 19234544 AAATAAGTTCCGAGCAGCG 58 NA Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 2 2 2 62 X 20066369 20066387 CATCAAGCACGAGATGTCC 58 20066243 20066343 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 3 2 2 170 X 20067043 20067413 ATGGAATACAAACCCGTGC 58 20066891 20066909 GTAAACCGCCTTGATCGTC 59 NA InUTR Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251 1 2 4 148 X 20988419 20988489 CATCACATCACTCGTAAATACCAG 59 20988596 20988614 TCTTCGGAGTAGTAGGGCT 59 NA Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 3 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 3 3 3 78 X 11985502 11985522 ATATACACCAACTGAGTGCAG 57 11985623 11985641 GTGAACGGGATTCACTAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13947 FBgn0031277 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31885 FBgn0051885 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:35Bc FBgn0028910 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Aa FBgn0011931 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-3316b FBgn0082971 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M-i:61D FBgn0052482 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 ban FBgn0064191 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S2b:86A FBgn0011970 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:F FBgn0013693 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1192a FBgn0083001 FBtr0113566 2 1 1 60 X 17038538 17038558 TTGTAGACCAGATCGAGAACC 59 17038498 17038517 TTCGAAGCTCAATTCTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32661 FBgn0030356 FBtr0073593 3 1 1 117 X 11812517 11812635 AGCGACGGAAATCTATTTGTG 59 11812420 11812440 TTCGATTGACTTGAATGGCAG 59 NA Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903,FBtr0111134 3 2 2 60 X 22414487 22414506 GGCAACAAGACTGATTTGGA 58 22414446 22414465 CATATTGAAGGGCCTCATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33502 FBgn0053502 FBtr0070055 2 1 1 76 X 21481051 21482120 TCCTTTGGCCAAATTGCTG 59 21480993 21481011 TCGAGATGGTGACGAAGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10918 FBgn0031178 FBtr0077218 2 1 1 60 X 21299762 21299780 ATAGCTCCACCGATAGCTC 58 21299720 21299738 TATCCCGAACCAGTAGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14581 FBgn0040645 FBtr0077186 3 1 1 60 X 21126488 21126506 TATTCAAACGATCGCACGG 58 21126527 21126548 CATTCTGGTTATCACCATTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 2 1 1 60 X 20911184 20911427 CAAGTTTCTCGAACTGGGT 57 20911142 20911161 GTTGAAGCTGTAGAAGTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG1304 FBgn0031141 FBtr0077271 2 1 1 62 X 20835754 20835773 TATAACAACCAAGTGGTGGG 57 20835711 20835729 TGGATAGCTCGTTCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42577 FBgn0260867 FBtr0301567 2 1 1 171 X 20130375 20130393 AATTGGAAGCAACGAGGTC 58 20130528 20130546 TTTAACTTTCCTCGCGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpp20 FBgn0066304 FBtr0091935 3 1 1 80 X 19638700 19638792 AAGACAGACTTTAAGGCCCA 59 19638833 19638853 CATGCAATGCAGAAAGATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 3 2 2 97 X 19171596 19171693 TACTTGCCCAAGGAAAGGT 58 19171517 19171537 CGAATAAACCCAACAATGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 inx5 FBgn0030989 FBtr0074698 3 1 1 92 X 19063908 19063926 TACTTCACCACCGACTACG 58 19063541 19063853 GTTCACCACACTGATGAGGA 59 NA Drosophila melanogaster 61 CG7423 FBgn0030982 FBtr0074704 3 1 1 74 X 18977159 18977177 GACAATCAAGAACGGCGTG 59 18977103 18977124 ATCTGATCGTTCACATTAAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42450 FBgn0259927 FBtr0300218 3 1 1 85 X 18715494 18715631 CATATGCGTTTATGGGATACGA 58 18715677 18715695 ATTAGCAATGTTGAGGGCC 58 NA Drosophila melanogaster 61 psh FBgn0030926 FBtr0074629 1 1 1 100 X 18379398 18379416 CAACACCGATGCCAATACG 59 18379258 18379336 TCTTAACGCTTCGTATGACGA 59 NA Drosophila melanogaster 61 Andorra FBgn0030898 FBtr0074591 1 1 1 60 X 18072906 18072925 CCTGCTAATCGGCTATTTCC 58 18072865 18072885 ATATTCCACATAGAGCGACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 1 2 2 80 X 17974381 17974458 TTTCACAGTCCGAACTATGC 58 17974320 17974338 GCAAGAGGACACAATCGAG 58 NA Drosophila melanogaster 61 CG8326 FBgn0030851 FBtr0074486 1 1 1 80 X 17523297 17523387 CAGAAGGAGAAGAAACTTTCCA 58 17523238 17523256 ACGGAACTTAAAGGACACC 57 NA Drosophila melanogaster 61 CG8675 FBgn0030834 FBtr0074446 2 1 1 90 X 17143431 17143452 AGTCTGTGATCGAAATAGTCCA 59 17143302 17143320 GTGTGCGACTTACATTGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8918 FBgn0030823 FBtr0074403 3 1 1 91 X 17096279 17096297 ATGGAACTTCTATTGGGCG 57 17096155 17096227 GGTTAATGACTTGATCTGATCG 57 NA Drosophila melanogaster 61 xmas-2 FBgn0028974 FBtr0074404 2 1 1 81 X 17051540 17051618 GCGACAGTATGAGTTGGTG 58 17051477 17051495 GTCTCGTGGTGGTAAAGGT 59 NA Drosophila melanogaster 61 CG13000 FBgn0030807 FBtr0074416 2 1 1 60 X 16842425 16842443 TCCTCACTGACTTTCTGGA 57 16842383 16842401 AGTTGGTCTGGATGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13005 FBgn0030794 FBtr0074334 3 1 1 154 X 16698012 16698109 ATAGTCATCGATCGAAAGCG 58 16698226 16698244 GATGGTCTACCCACTTTGG 57 NA Drosophila melanogaster 61 CG9947 FBgn0030752 FBtr0074301 1 1 1 83 X 16334440 16334702 CTCGGACTTCAATGGTGTG 58 16334375 16334393 TCCCGTGACTTCACATAGC 59 NA Drosophila melanogaster 61 CG4301 FBgn0030747 FBtr0074272 3 1 1 88 X 16307652 16307734 AAGTTGATGAGAACGCCAC 58 16307785 16307804 GCAAATAGGACCCACATCAG 58 NA Drosophila melanogaster 61 CalpC FBgn0260450 FBtr0074226 2 1 1 128 X 16220581 16220599 GAAGGAGCTACTCACCACC 59 16220688 16220783 CTGGAGAGTCTGTAGTTAACGT 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 1 4 4 80 X 16188804 16188822 TCTGAAGGAAGACTGCCAG 59 16188672 16188763 ACTATGATAGGTGTACCTGGTG 58 NA Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 1 2 2 92 X 15821908 15821992 GGCAAGATCGGAAAGAGTG 58 15822045 15822066 AGATGGTATAGGACTCATTCGA 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 CG8134 FBgn0030671 FBtr0074054 3 1 1 192 X 15598431 15598635 CTTCTTCAAACGCTTTGCG 58 15598791 15598809 TAGGAAGGATCTAGCTGCC 58 NA Drosophila melanogaster 61 CG42299 FBgn0259195 FBtr0299679 1 1 1 80 X 15469577 15469653 AAATGGCAGAAGTCGTGTC 58 15469515 15469533 ACTTCTCGATGGTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026,FBtr0112984 2 2 2 80 X 15039306 15039397 TTGTGAGATTGTGGAGTGC 58 15039244 15039262 CCGTAGTATGTGCCATTGG 58 NA Drosophila melanogaster 61 CG32591 FBgn0052591 FBtr0073973 2 1 1 60 X 14821988 14822007 AAGTCGAACATTACTGTGGC 58 14821947 14821967 GACTGACTTGAGATCTCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991,FBtr0073990 2 2 4 97 X 14722054 14723177 CTTCAGCAGATCTTCAGAGC 58 14721976 14721998 CTATAATGGCACCATTCTCATCC 59 NA Drosophila melanogaster 61 Ag5r FBgn0015010 FBtr0073937 2 1 1 109 X 14679994 14680140 GCGACAATAATGGAGCCTG 59 14679903 14679921 GTTGCGATACTCGTTCGTC 59 NA Drosophila melanogaster 61 Ag5r FBgn0015010 FBtr0073937 1 1 1 108 X 14679993 14680139 CGACAATAATGGAGCCTGG 58 14679903 14679921 GTTGCGATACTCGTTCGTC 59 NA Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 2 2 2 81 X 13779523 13795523 CCCATAAGGTGGTCCTCTC 58 13779460 13779481 ATCACAATTAGATGTCCTTCGG 58 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 1 4 4 80 X 13726825 13726846 TATCCAGATATGAGCCAATTCG 58 13726694 13726784 GCAGAAGGATTTCAATGGC 57 NA Drosophila melanogaster 61 CG2691 FBgn0030504 FBtr0073848 3 1 1 80 X 13517496 13517591 GTCATCCGACATGTAATCGG 58 13517435 13517453 GAACGTCGAGCTGTATGAC 58 NA Drosophila melanogaster 61 Tango2 FBgn0030503 FBtr0073807 1 1 1 80 X 13512425 13512639 ATCGAAATTGGATCTGCATCC 58 13512681 13512699 GTTCTGGAAATCCTCCAGC 58 NA Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 2 1 1 111 X 13509719 13509737 CGTCGTCAGTACTTGAGCA 59 13509370 13509388 TGCTCAGTCCCAGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 3 2 2 81 X 13314322 13314405 GCAAGAAGGTCAAGAGTTCC 58 13314445 13314467 CTTATCTCAAAGCGGAACTTCTC 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 84 X 13268352 13268370 CATGGAATATGCCGTTCGC 59 13268418 13271908 GAATGGCTTCTTGACACCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1824 FBgn0030403 FBtr0073658 2 1 1 138 X 12488017 12488035 CTTCGAGTTCCTATCGCTG 57 12487634 12487915 CTTGAGCACCAGATGATCG 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 2 6 6 151 X 11688899 11688918 AAGTGCATTGACGTGTACAC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533,FBtr0073532,FBtr0073534 1 3 3 60 X 11571763 11571781 AATCAGTTCGAGAGCATCC 57 11571721 11571739 CTCCTGTAGTCTTCATGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15196 FBgn0030296 FBtr0300849 1 1 1 86 X 11304350 11304368 TAAACCGAAGCCGAATAGC 58 11304415 11304501 ACTAGGTAAGCATTTGGATGTG 58 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073406 2 1 3 86 X 10769332 10769350 GAGTTTATGCGGCAGATCG 59 10769194 10769284 CGAGAAGTTGAACTTCTCCTC 58 NA Drosophila melanogaster 61 CG32687 FBgn0052687 FBtr0071458 2 1 1 109 X 10377581 10379751 ATGCAAAGTCTGCATGTGC 59 10377490 10377508 ATCAGATTGTCGCACAGGA 59 NA Drosophila melanogaster 61 Neb-cGP FBgn0083167 FBtr0071449 2 1 1 197 X 10354994 10355012 ATCTTCAATGGCACCACCA 59 10355257 10355276 TAAACTGATCCGCAGTCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 3 2 2 163 X 9873643 9873811 ATACTTTCTGAGGCTCATGAC 57 9873383 9873401 TTCGGTTTACCTTTGGCTG 58 NA Drosophila melanogaster 61 c11.1 FBgn0040236 FBtr0071326 2 1 1 94 X 9175653 9176835 ATTCTGGAAGGCGTTCTCC 59 9175577 9175595 AAGATCTTCACGATCGCCT 58 NA Drosophila melanogaster 61 CG12056 FBgn0030099 FBtr0071305 3 1 1 60 X 9087118 9087138 GATGTGTTAACCCTAAAGCCG 59 9087160 9087178 GATAGAAATCCCGCCATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300001,FBtr0300000 3 2 2 119 X 8946140 8946158 CTGGTCAAGACGGATCTGG 59 8946241 8946319 GGAACGAATGTGGTACAGC 58 NA Drosophila melanogaster 61 Es2 FBgn0023506 FBtr0071198 2 1 1 90 X 8355874 8355893 GTACAAATGGCCGAGATTCG 59 8355946 8356106 GGGACATGGCATTATTCCG 58 NA Drosophila melanogaster 61 CG10958 FBgn0030004 FBtr0071153 2 1 1 60 X 8028401 8028421 TACATTTCTACCCAAGAGCGA 59 8028439 8028461 CATGACCAGATAGTGATTGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dok FBgn0029944 FBtr0071049 1 1 1 152 X 7219743 7219761 GCTACCCTAACACTGAGCA 59 7219877 7220138 CAAGCCATCAAAGGAGCTG 59 NA Drosophila melanogaster 61 l(1)G0148 FBgn0028360 FBtr0070950 2 1 1 85 X 6549440 6549458 ATTCAATGGAGCTGCAGTC 58 6549507 6549594 CATTGATGGCTTCTTCGCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 2 2 2 60 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187729 6187747 CTTCTTTCGCTCCTTGGTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 lin-52 FBgn0029800 FBtr0070840 1 1 1 80 X 5648378 5648479 AAGATTAATGAACTAGCCCAGC 58 5648319 5648340 CAGCTGGTAAATTTCATCATGC 58 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083,FBtr0301084 3 2 2 128 X 5601328 5601413 CCCTTCTTCGATAAGAATAATCCC 59 5601500 5601518 GATGCACATGTTGTTCGTG 58 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 1 4 4 80 X 5215903 5215921 CGTATCAGGAGCTGAATGC 58 5215760 5215862 CATTCAGTTTGAATGCGATTCC 59 NA Drosophila melanogaster 61 CG12682 FBgn0029729 FBtr0070716 2 1 1 60 X 4720495 4720513 GCTCCTTTCACCCTTAACG 58 4720537 4720555 TTGGCTATTCAGTAGGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bteb2 FBgn0025679 FBtr0070735 3 1 1 60 X 4665390 4665409 GGCAACTATAATCAGCTGGA 57 4665349 4665367 TGTCCAATGTGATGATGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GlcAT-I FBgn0066114 FBtr0070644 1 1 1 80 X 4025468 4025486 CACGATTTACGCCGTAACG 59 4025525 4025611 AGCATAAAGAGGTGAGATAGTCTG 59 NA Drosophila melanogaster 61 Crg-1 FBgn0021738 FBtr0070599 2 1 1 81 X 3689191 3689209 ACGGAGCTCATCGAATACG 59 3689250 3690703 GAAGTAGATGCGATATCCATTGG 59 NA Nonspecific Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 2 2 2 80 X 2629129 2629220 GGGATATACTGGATCCGTCG 59 2629068 2629087 CGATTTCCTGGAACTTGTGC 59 NA Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070368,FBtr0070367 3 2 2 60 X 1761161 1761180 CCTTTAGAGGACAGAACCAG 57 1761120 1761139 GAAATGACCATCTTCAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 2 2 2 82 X 1753950 1753974 GTTAACATTGAGTATGAACTGGAGG 59 1753835 1753910 TGCACATTCATTGGCAAGG 59 NA Drosophila melanogaster 61 CG11638 FBgn0040351 FBtr0070183 2 1 1 156 X 909302 909320 AAGTCAGGTCTATCCTCCG 57 909104 909182 TGTCCTCAATGTCCTCCTC 58 NA Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 2 2 2 60 X 787528 787546 TCTGGACGTTCATCAGGTG 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3713 FBgn0040343 FBtr0070195 2 1 1 60 X 741014 741035 GAAAGTGGTAAAGGTCGAACTG 59 740975 740994 ATTGCGGATGAGTTCAAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13365 FBgn0029529 FBtr0070160 1 1 1 109 X 514978 514996 CTACGGCTACAAGACGGAG 59 514887 514905 TGTGGAATCCAGAGAACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929,FBtr0070110 1 2 2 80 X 488326 490394 GAACGAGCTATACGGTACCC 59 490435 490455 ATGTAGGTGTACGACACTTCC 59 NA Drosophila melanogaster 61 Or1a FBgn0029521 FBtr0070070 3 1 1 127 X 210300 210319 AAACCTTCCTCCTAAACACC 57 210409 210537 CTGCTGTGCGAAATATCCA 58 NA Drosophila melanogaster 61 CR41379 FBgn0085784 FBtr0114236 1 1 1 60 U 1397529 1397547 CCTCAACTATTGGTCCGCA 59 1397487 1397506 GAAGATGTACTCCGCTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40640 FBgn0085759 FBtr0114209 3 1 1 84 U 9660663 9660682 GTGCTCTGAATGTCAAAGTG 57 9660729 9660747 GATGACGAGGCCTTAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR40820 FBgn0085523 FBtr0302336 2 1 1 87 U 7044566 7044584 CGCTTAACTTCCCTATGCT 57 7044497 7044517 AGGATCCGATATTCTTTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111045 3 1 3 60 4 996517 997395 GGATGTACCAAACAAGTGTG 57 997415 997436 TCGATACTGACAGTATGTACAG 57 NA DesignRelaxed Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111045 1 1 3 151 4 996516 997395 GGGATGTACCAAACAAGTGTG 59 997508 997526 GGCTTTACCGTAGAAGCGA 59 NA Drosophila melanogaster 61 onecut FBgn0028996 FBtr0089104 1 1 1 90 4 624870 625638 ATAGCGGAACGAATTGGCT 59 624798 624816 ATGTGAAACCTCGCTTCCA 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 2 7 7 93 4 258102 258120 GAGCTCGACTTACACAGTC 57 258177 260949 TAGCGGATTCTTTACTGGC 57 NA Drosophila melanogaster 61 snoRNA:Me18S-G1189 FBgn0086058 FBtr0114334 3 1 1 61 3R 10197449 10197468 TCCCTAATGATGCTGGACTG 59 10197407 10197428 TTCAAGATCTCAAGAGCAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301176 2 1 4 135 3R 5377491 5377509 TCTTTGTCAGGTCGAACCC 59 5375419 5375440 ATGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ir100a FBgn0039879 FBtr0085846 3 1 1 60 3R 27627598 27627616 TGTGGTTATGCTTTCTGCT 57 27627639 27627658 GCTCTCAGAATAAGCCAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 3 2 2 89 3R 27617577 27617595 AGGATCCATTTGTTGCCAC 58 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 CG2150 FBgn0003065 FBtr0085859 1 1 1 62 3R 27590058 27590377 TCTCAGTGTTCTTAGTGTTCG 57 27590016 27590034 TATATCCGGATGGTGGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 rod FBgn0003268 FBtr0085795 2 1 1 80 3R 27407663 27407747 CTTGGAACACTATATTATCGCACTC 59 27407785 27407803 CACATGTACACTGTGCGAG 59 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 2 2 2 80 3R 27214966 27214986 GAGAATACGGACACGAAAGTG 59 27215024 27215112 CAAGTAATTCCATCCGTTGTAGG 59 NA Drosophila melanogaster 61 CG15564 FBgn0039833 FBtr0085770 1 1 1 81 3R 27060873 27060891 AGGAGAGTCTTCGCATGTG 59 27059932 27060828 AGGTCGTAGTACTCCTGCT 59 NA Drosophila melanogaster 61 CG15563 FBgn0039832 FBtr0085771 1 1 1 60 3R 27057881 27057899 GCAACCAGGATTCAAACGG 59 27057839 27057858 AGATCTGGACATTCAGGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0085758 1 1 2 80 3R 27047176 27051543 ACACCCACATAGACTATGACC 59 27051584 27051603 GGACATAACTTAAGGGCAGG 58 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 2 3 3 80 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028838 GAGTGTAGTAGTGCTTTCCAC 58 NA Drosophila melanogaster 61 l(3)03670 FBgn0010808 FBtr0085745 3 1 1 178 3R 26879316 26879334 ACTGAAGGCGGGAATATCC 59 26878877 26878895 CTCCCTGGACGTAAATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31008 FBgn0051008 FBtr0085748 1 1 1 64 3R 26815466 26815484 TCGGATCAGGAATAACGGG 59 26815420 26815438 GACTAAATCGCTGTGGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pka-C2 FBgn0000274 FBtr0085727 3 1 1 80 3R 26522141 26522239 GTTACCATCGCAGAGTTCG 58 26522079 26522099 TATACTCAAGAGCAAGTGCCA 59 NA Drosophila melanogaster 61 CG7946 FBgn0039743 FBtr0085561 3 1 1 81 3R 25879120 25879140 ATCAGTGAAGAAATCCAAGCC 58 25879181 25879280 CTCGTTCCGGATGTTATTGAC 59 NA Drosophila melanogaster 61 Nlp FBgn0016685 FBtr0085552 3 1 1 92 3R 25830769 25831022 CATTCTACGGAGTCACTTTGAC 59 25831074 25831093 GTTTGATGACCAGCTTCTGG 59 NA Drosophila melanogaster 61 Obp99a FBgn0039678 FBtr0085450 3 1 1 60 3R 25497635 25497654 GTGGAGAAGTACCAGAAGTG 57 25497677 25497695 ACTTGATGTAGCACTGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk20 FBgn0039676 FBtr0085466 2 1 1 80 3R 25492796 25492864 TCTAATTGCCAATCTGGGTG 58 25492735 25492756 AGGTAGTAGATCAACTCGAAGG 58 NA Drosophila melanogaster 61 CG11900 FBgn0039650 FBtr0085407 3 1 1 81 3R 25028151 25028171 ATCCATCTGCCAAATTCATGG 59 25028023 25028108 GTTTCCTGAGGATCCTTGC 58 NA Drosophila melanogaster 61 CG12558 FBgn0039599 FBtr0085311 1 1 1 60 3R 24616471 24616489 AATTCCCGCTGAAATCGAG 58 24616513 24616531 CTTTGGTGCCTCTGTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mfrn FBgn0039561 FBtr0085266 1 1 1 80 3R 23770727 23770808 CTCAACTACGTGATTTCGGG 58 23770666 23770684 ACGCTGTTTGATCACATCC 58 NA Drosophila melanogaster 61 CG5611 FBgn0039531 FBtr0085199 3 1 1 166 3R 23460813 23460895 CAAGAACTCTGAAATAAAGGGC 57 23460668 23460688 TGCAACTAACCAGAAGAACAG 58 NA InUTR Drosophila melanogaster 61 CG34293 FBgn0085322 FBtr0112489 1 1 1 81 3R 22991079 22991161 GCTGATCAATGGATTCTTTCTG 57 22991019 22991037 GGTTTGCATGTAGTTGGGA 58 NA Drosophila melanogaster 61 CG6074 FBgn0039486 FBtr0085133 3 1 1 108 3R 22929094 22929311 TACACGTACAAGGGTTCCC 59 22929004 22929022 GACGGAATCGGGAGATCTG 59 NA Drosophila melanogaster 61 CG6503 FBgn0040606 FBtr0085025 1 1 1 60 3R 22250590 22250608 CATTGAGCGTCCTGTTCAC 59 22250548 22250567 GTTGATGTTCAGGCTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34024 FBgn0054024 FBtr0100079 1 1 1 73 3R 21756463 21756481 CAGTGCTCGCTAGTTTGTG 59 21757152 21757174 GATGTCTATGGACATTAGGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 bam FBgn0000158 FBtr0084869 2 1 1 91 3R 21069703 21069783 GGACAAGTTCCATACTCAGC 58 21069631 21069652 AGTTAAATACGTGCACACTGAG 59 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 1 2 2 160 3R 21053857 21056363 TTAATAAAGCTACTCTGGGCG 58 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 CG34027 FBgn0054027 FBtr0100082 2 1 1 83 3R 20932775 20932793 GACCCATGGAAACATTGGA 57 20932657 20932731 TCATTATCGTTACCTGGAAGTC 57 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 CG42539 FBgn0260656 FBtr0301215 2 1 1 90 3R 20735204 20735224 CCGAGATCTCATACTATGCCA 59 20735275 20736512 AATACTCCAGTTTCGTCGTG 58 NA Drosophila melanogaster 61 CG5805 FBgn0039223 FBtr0084743 3 1 1 97 3R 20611625 20611702 CTATCAGGACGAACTGTTCC 57 20611547 20611565 GTATTGTCGTTGTGAAGCC 57 NA Drosophila melanogaster 61 tld FBgn0003719 FBtr0084691 2 1 1 80 3R 20577195 20577265 AGATTCGAGGTGGTATGTGG 59 20577304 20577326 GTAGTCCATAGGATAGTTGGGAG 59 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 2 1 1 60 3R 20544779 20544866 GATTCATGCTTTAGCAGCC 57 20544737 20544755 TGGATTGTAGGCTCCATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089915 3 1 2 176 3R 20483111 20483132 ATGATATGGAATTGGACACTGC 59 20484126 20484231 ATCGGCTTTATATTGCCGG 58 NA InUTR Drosophila melanogaster 61 Dis3 FBgn0039183 FBtr0084605 3 1 1 81 3R 20161161 20161180 ATGAAATAGCCAAGTCCCTG 57 20161224 20161298 ACAAGGGCTCCATTATCCA 58 NA Drosophila melanogaster 61 p38c FBgn0046322 FBtr0084582 2 1 1 60 3R 19975186 19975209 GATTAACATAATGGGTACTCCGAC 59 19975149 19975168 CGAACGTTCCATGCTTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089497,FBtr0089498 2 3 3 80 3R 19763340 19763464 TTCAAGCTAAGATCATTGCCG 59 19763280 19763298 GGATGTTGCGATCGATGAG 58 NA Drosophila melanogaster 61 CG13599 FBgn0039128 FBtr0084493 3 1 1 86 3R 19757646 19757665 CTCATTACCAACGCAACCAG 59 19757714 19757793 AGGCTTGTCGGATGATCTC 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 3 2 2 134 3R 19655748 19655912 GCATTAAGGGTCAAATCTACG 57 19656008 19656026 GAATGATGTAGCCATCGGG 58 NA Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 3 1 1 84 3R 19362086 19362159 AGAAATGCTTGAGTCTGACCA 59 19362022 19362040 ATTAAAGAGCGCCTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368,FBtr0084369 1 3 3 82 3R 18947821 18947839 ATGACTCCACGCATCACTC 59 18947885 18947964 TTCCCAGTGGATTCTACGC 59 NA Drosophila melanogaster 61 Tpl94D FBgn0051281 FBtr0084339 2 1 1 81 3R 18792267 18792356 TCGATATGCTAACATGAAGGAC 58 18792396 18792416 AGTAATCTTTCTACGAGCAGC 58 NA Drosophila melanogaster 61 Takl2 FBgn0039015 FBtr0302204 1 1 1 80 3R 18558618 18558636 TGTGGACCTATCCCAATCG 58 18558490 18558579 GGTTTATTTCCTTGTAGAACCTCG 59 NA Drosophila melanogaster 61 CG42686 FBgn0261572 FBtr0302858 1 1 1 197 3R 18483996 18484014 CCACCAACATCAGAATGCG 59 18484175 18484453 GCTGGAATTCTGAGGAGCA 59 NA Drosophila melanogaster 61 CSN6 FBgn0028837 FBtr0084265 2 1 1 90 3R 18406922 18406940 GAAGACGGACGTTATTGGC 59 18406994 18407070 GAGATCACTGAACACCTGC 58 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 3 3 3 118 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380653 TTCTTCATGTACTCGGGTCC 59 NA Drosophila melanogaster 61 fit FBgn0038914 FBtr0084153 1 1 1 60 3R 17709967 17709986 CATTCTAATGCACAAGGTGG 57 17709926 17709946 TTTCTTGGTACTCTCGTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077,FBtr0084139 3 2 2 81 3R 17703105 17703192 GGAGACTTTGAAGTGAAGTTGG 59 17703234 17703252 CATCGCAATTGGGAATGGT 58 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 1 2 2 83 3R 17566291 17566309 CACGGCTATTATGGCATCG 58 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 Sfp93F FBgn0261060 FBtr0301940 1 1 1 64 3R 17561949 17561967 TCTTGTTGTGCTCATTGGG 58 17561844 17561921 CGACTTACAACTTTGCCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DNApol-alpha180 FBgn0259113 FBtr0084115 1 1 1 80 3R 17495949 17496035 CGACAATTTCTCTTAGATCCCA 58 17495890 17495912 GTCGAACTCCTTGTATATGTCTG 58 NA Drosophila melanogaster 61 CG31207 FBgn0051207 FBtr0084044 2 1 1 80 3R 16872101 16872122 GAGTATCGCAATAATAAGCGCT 59 16871978 16872060 TAGCCAGAATACCCATCGG 58 NA Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 1 1 1 93 3R 16569362 16569382 CAGATGCTCAATATGCAAAGC 58 16569232 16569307 GAATCTTGCCCTCAAACCC 58 NA DesignNoJunction Drosophila melanogaster 61 MtnB FBgn0002869 FBtr0083890 1 1 1 82 3R 16329157 16329236 GTGGAACAAACTGCCAGTG 59 16329093 16329111 ATTCTTGCAAACGCACTGG 59 NA Nonspecific Drosophila melanogaster 61 CG31210 FBgn0051210 FBtr0083844 2 1 1 94 3R 15842984 15843002 TAGATCACAGATGCCGCAG 59 15841011 15842926 GTTCAACGCCTTGATTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 3 2 2 89 3R 15697486 15697576 AGATCGGTTTCCGAGTCAC 59 15697415 15697433 TCTGGTTATCGCCTTCCTG 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 1 3 3 80 3R 15676019 15676037 GTTTCGCAACCTAAGGGAC 58 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 CG34284 FBgn0085313 FBtr0112480 2 1 1 83 3R 14728601 14728620 GCAGTGCTGATAGCTTTCTG 59 14728461 14728480 ATCAATTGACTGTTGCACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14297 FBgn0038655 FBtr0083696 1 1 1 82 3R 14724287 14724366 TTTGTCGTCAGTTCACCGT 59 14724411 14724430 GAGCAGTTCTTTGAACACGG 59 NA Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 1 2 2 167 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115418 14115495 CAATTCGTTCTCCTGCAAGG 59 NA Drosophila melanogaster 61 CG7985 FBgn0028499 FBtr0083559 3 1 1 235 3R 14026152 14038138 CGGCTTTAACAATGCACTC 57 14038337 14038355 CTGCTCGATAAGCTTCTGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14326 FBgn0038528 FBtr0083467 2 1 1 129 3R 13444863 13444946 GATTAGCTGTTCGCTGCTG 59 13445037 13445057 GATACGATTGTCTACTTGCCC 58 NA Drosophila melanogaster 61 CG34053 FBgn0054053 FBtr0113472 1 1 1 88 3R 13230407 13230425 GAATACCGGAGGTCGAGAC 59 13230280 13230355 GTTCGTTGACATAGGCCTG 58 NA Drosophila melanogaster 61 CG34279 FBgn0085308 FBtr0112474 2 1 1 80 3R 13228453 13228652 GCAAGTACCAGAAGGATTATCG 59 13228394 13228413 TGTCCATCCCTAGAAGTTCG 59 NA Drosophila melanogaster 61 CG34279 FBgn0085308 FBtr0112474 1 1 1 80 3R 13228681 13228699 GTGCCTAAGATCCTTTGCC 58 13228441 13228640 TCCGCTATTATGCGATAATCCT 59 NA Drosophila melanogaster 61 CG5319 FBgn0038501 FBtr0083435 2 1 1 80 3R 13213137 13213220 GAGAGTTCGACATCGATCC 57 13213262 13213282 TAGCATAGAATACGGAACTGC 57 NA Drosophila melanogaster 61 Mur89F FBgn0038492 FBtr0083413 1 1 1 122 3R 12979698 12979716 TACCAAGACAAGTCCTGCA 58 12979518 12979614 GCTGATTTGAACCACATTCTG 58 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 3 3 3 82 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894759 TAATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 CG14882 FBgn0038429 FBtr0083289 1 1 1 129 3R 12268986 12269005 TGCGAATTGGTAAATACGGG 58 12269097 12269165 ATGTTTCGGTGGGTCTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17931 FBgn0038421 FBtr0083323 3 1 1 92 3R 12184463 12184482 GAAGAACCAGAAGAAGCAGG 58 12184319 12184408 ATTAACTCAGCGTCCCTGG 59 NA Nonspecific Drosophila melanogaster 61 Manf FBgn0027095 FBtr0083283 2 1 1 80 3R 12175455 12175474 CTACAAACAGATCGAAACGG 57 12175515 12175621 CCGAGGTAGTAACAGAATCTG 57 NA Drosophila melanogaster 61 Zip3 FBgn0038412 FBtr0083266 3 1 1 94 3R 12133113 12134063 GCAGTTGACTTCCATTGGC 59 12134120 12134139 CAGTCTCAGTCTCTTGGTGG 59 NA Drosophila melanogaster 61 sra FBgn0086370 FBtr0083255 2 1 1 271 3R 12012940 12012958 CAACAACGGTGGAGAAGAG 58 12021924 12021942 TGTTCTGTGTCGACTTCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 2 3 3 91 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616531 11616550 GTGTAGCTTCTCACTGTTGC 59 NA Drosophila melanogaster 61 CG4525 FBgn0038358 FBtr0083170 2 1 1 80 3R 11602483 11602563 AATTGGGATCGAAAGAGCA 57 11602607 11602625 TAGTGTCACACTCTGTTGC 57 NA Drosophila melanogaster 61 CG6974 FBgn0038285 FBtr0083042 1 1 1 60 3R 10904600 10904619 ACGAAGTTGTCCTTAACGAG 58 10904559 10904580 AGGGTTTCGTGTTGAATTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14856 FBgn0038261 FBtr0082992 2 1 1 80 3R 10625866 10625884 AGGCACGTCTCATTGACTC 59 10625926 10626005 TCACTATCGAGAAGACAACCG 59 NA Drosophila melanogaster 61 CG14841 FBgn0038218 FBtr0082951 2 1 1 80 3R 10087943 10088033 ATAAGCGACTCGGATCCTG 59 10087881 10087899 CGATGATCCTCCACTTGCA 59 NA Drosophila melanogaster 61 CG10841 FBgn0038163 FBtr0082795 3 1 1 87 3R 9458164 9458184 GGATGTCACTGACTATTTCCA 57 9458233 9458310 CTTATGCAGTGTTTCGCTG 57 NA Drosophila melanogaster 61 CG17025 FBgn0040554 FBtr0082792 1 1 1 80 3R 9284262 9291444 TCACCAGAAAGCTAAATGACTG 58 9284203 9284221 ACAAGATGTCCTGGTTCCA 58 NA InUTR Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082786,FBtr0082785 3 2 2 60 3R 9252475 9252494 GAAGGACTCCTATGTTGGTG 57 9252514 9252535 GTATTTCAGGGTGAGGATACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9799 FBgn0038146 FBtr0082763 3 1 1 157 3R 9212600 9212679 AAAGGAAAGGTTGACAAGCC 59 9212462 9212481 ACGAACTTGCGAACAATGAC 59 NA Drosophila melanogaster 61 CG8784 FBgn0038140 FBtr0082745 1 1 1 80 3R 9168244 9169318 GAATGTTGGTAGCTGTAGCC 58 9169361 9169379 GTCCGTAAACTGCCATCAG 58 NA Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 2 2 2 80 3R 9125275 9125295 AGATGAAGGATAAGCTTGTGG 57 9125336 9125489 TCGTCGTAGAAATGGTTCTG 57 NA Drosophila melanogaster 61 CG42573 FBgn0260793 FBtr0301436 3 1 1 151 3R 8954278 8957096 GGCTCAAGGCAATTAATTGC 58 8954146 8954168 CATCAGTAGATTACGGTCTAGGA 58 NA Drosophila melanogaster 61 CG11656 FBgn0038109 FBtr0082698 2 1 1 131 3R 8835794 8835893 TATTATCTCAAGAGGCTGCTG 57 8835986 8836004 TCTTCTTGGAACTCCTCGA 57 NA Drosophila melanogaster 61 CG5999 FBgn0038083 FBtr0302379 1 1 1 81 3R 8568757 8568775 CTATATGCAAAGCCTCGGT 57 8568638 8568714 GCCATAAACTTCCTTGTACCA 58 NA Drosophila melanogaster 61 Tim17a1 FBgn0038018 FBtr0082610 2 1 1 60 3R 8189866 8189884 GCAGGGATAGTCATCAAGC 58 8189824 8189845 GATCAATAGTCTCCAGTATGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10898 FBgn0037911 FBtr0082410 1 1 1 128 3R 7384371 7384389 TTCTGATGATCGAGGAGGC 59 7384551 7384571 CATTTAGACCAGTCTCTTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 1 2 2 109 3R 7326958 7329142 CAATACTTCGGCCATCTGG 58 7329215 7329233 GCAATAACCTCCCGATCTG 58 NA Drosophila melanogaster 61 ninaG FBgn0037896 FBtr0082404 3 1 1 94 3R 7245310 7245474 GGTAGATGCTAGTGTACTACCC 59 7245237 7245256 TCTTCAGAATCCAAGAGGCG 59 NA Drosophila melanogaster 61 CG17721 FBgn0037885 FBtr0082354 1 1 1 80 3R 7061192 7061210 TCAATTGGCATAACGACCG 58 7061348 7061366 CACTCAGTTCATACTGGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG4757 FBgn0027584 FBtr0082339 3 1 1 82 3R 6987958 6988046 CGCTTTCTTTGATCTGCGA 58 6988092 6988110 AGAGCAACGCAATAGAAGC 58 NA Drosophila melanogaster 61 CG31391 FBgn0051391 FBtr0082321 3 1 1 60 3R 6530225 6530243 GTTTACCTGAGCCACTTCC 58 6530183 6530202 CGCCCTTGATAATCTCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2e FBgn0051410 FBtr0273369 1 1 1 84 3R 5879518 5879536 TTAAGGATTGCGAGGAACC 57 5879584 5879660 TTGTTGTTATTGCCCAGGA 57 NA Nonspecific Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 1 1 1 90 3R 5645282 5645364 TTTGCTGTCCACTTCATGC 59 5645210 5645228 GCTCCCAGGTCTTGTACTC 59 NA DesignNoJunction Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 1 2 2 91 3R 5566776 5566794 AAACTGAATTCGGCCAAGC 59 5566849 5566923 GATCTCTGCAGGGATTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 p24-2 FBgn0053105 FBtr0082093 1 1 1 91 3R 5518341 5518362 CTTGTACTTCCACATATCGCAG 59 5518209 5518295 GCTCTACCTTGTAGTTAACAATCAC 59 NA Nonspecific Drosophila melanogaster 61 CG33654 FBgn0053654 FBtr0091633 1 1 1 94 3R 5408584 5408694 AAACGCCACGATTTAACGG 59 5408508 5408529 TGCTATTGGTTTCGAATCAGTG 59 NA Drosophila melanogaster 61 CG16736 FBgn0037668 FBtr0081985 3 1 1 120 3R 5083100 5083118 ATGGTCCTGGGTATAACCG 58 5082878 5083017 AATTTCGATAGTTGCGCCTC 59 NA Drosophila melanogaster 61 CG11997 FBgn0037662 FBtr0081972 3 1 1 60 3R 5003373 5003392 AGGATGTCAAGCGATACCTG 59 5003470 5003490 CATATGGAGACGTATGTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11997 FBgn0037662 FBtr0081972 1 1 1 60 3R 5003374 5003392 GGATGTCAAGCGATACCTG 58 5003471 5003491 GCATATGGAGACGTATGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Prosbeta3 FBgn0026380 FBtr0082010 1 1 1 60 3R 4831607 4831625 CAGACGGACATCCTTACTG 57 4831565 4831585 GTGTCTCGTACAGATTCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 2 3 3 101 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830324 TTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301245 1 1 2 83 3R 4635497 4635515 TCACCGACAAGATGTGGTC 59 4635370 4635450 AAGTGAAACCGCATGATGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42285 FBgn0259181 FBtr0299665 1 1 1 127 3R 4194304 4194867 TGAACCTAGATTGTCGCGA 58 4194195 4194213 CTTGATGGCCACGAAAGTG 59 NA Drosophila melanogaster 61 CG9601 FBgn0037578 FBtr0081854 2 1 1 60 3R 4168780 4168800 AGTATGACAAGGAGAAAGCTG 57 4168740 4168758 TCGGATTTCTCTGACGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arf84F FBgn0004908 FBtr0081838 3 1 1 80 3R 4166953 4167033 GCATATTACTGCTAGGTCTGGA 59 4167073 4167092 AGATGGTGTCTATGGGTTCG 59 NA Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0302178,FBtr0300896 2 2 2 60 3R 4046637 4046657 ACGCTAAACCTTACCAATGTG 59 4046676 4046697 CTAAACTGCTAAGACTACTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 2 2 2 103 3R 3979055 3979073 CAACTGCAAGACCACAACC 59 3975446 3978990 GACGATTGACATTGTGAAGCT 59 NA Drosophila melanogaster 61 CG3223 FBgn0037538 FBtr0081785 3 1 1 96 3R 3835264 3835282 CACAACATCGATCTGACGC 59 3835342 3835433 GGATGATCTCCAACTCGCT 59 NA Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0081756 2 1 2 112 3R 3733209 3733292 TAAATTTGTTGATGCGGCTG 57 3733366 3733385 AGAGATGGGAGTTAGATGGG 58 NA InUTR Drosophila melanogaster 61 alpha-Est10 FBgn0015569 FBtr0289953 2 1 1 80 3R 3313288 3313307 GAATAGCTGGAGTCACAGGA 58 3313168 3313250 CTTGAAACCTCTGGATAGAATAGC 59 NA Drosophila melanogaster 61 CG31496 FBgn0051496 FBtr0081582 2 1 1 114 3R 3170921 3170939 TCGGCCTAAGTCTTATGCC 59 3171273 3171291 ACAACGTTGCCAATGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14610 FBgn0037477 FBtr0081609 2 1 1 60 3R 2969817 2969835 CAGTGTCGGAAGAATCCTG 58 2969775 2969794 CTTCATGAAGTGCCTTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31248 FBgn0051248 FBtr0081564 2 1 1 101 3R 2956077 2956150 AAATTCAGTATGCACCACCA 57 2956212 2956232 TCATAAAGTCCATTAGACGCC 58 NA Drosophila melanogaster 61 Ccp84Ab FBgn0004782 FBtr0081692 1 1 1 193 3R 2528442 2528537 CCTTCAAGTTTGTCTTCGCC 59 2528268 2528286 GTAGGAGAAGCGGTACTGG 59 NA Nonspecific Drosophila melanogaster 61 CG1137 FBgn0037454 FBtr0081705 1 1 1 102 3R 2385616 2385879 CCAGCATGAATTTGCAACC 58 2385532 2385550 TTTCGGCATGATTAGCGAG 58 NA Drosophila melanogaster 61 CG9727 FBgn0037445 FBtr0081730 3 1 1 185 3R 2280177 2280195 CAGGAGGTGACTCTGAGTG 59 2279955 2280029 TCAAAGGTCCAATGTCTGCT 59 NA Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 1 2 2 91 3R 2269950 2269969 TGGACATGGTCTTAGTCACG 59 2270023 2271265 AATCGTTAACATCGTCGGC 58 NA Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 1 1 1 60 3R 2167802 2167820 GGTCCTTGGATGTGATACC 57 2167841 2168062 GTAACATTAAGAAACTCCTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 1 2 2 117 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161727 2161748 GATATAGTTCTCAATGGCGTCC 58 NA Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0078619 1 1 2 80 3R 1919997 1920015 CAGTGTTCAAGATTGGCGA 58 1919383 1919953 CGTAGTAGTCCTCACACCC 58 NA Drosophila melanogaster 61 CG10280 FBgn0037395 FBtr0078648 1 1 1 157 3R 1837091 1837398 TGGCGGAAGATGAATACGA 58 1836952 1836970 ATGCCTCATTGGATTGACG 58 NA Drosophila melanogaster 61 Madm FBgn0027497 FBtr0078722 3 1 1 98 3R 1569811 1569829 CTGCTCTTTCACCCATTGC 59 1570743 1570761 TTCCGAGAACATAGTGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Nmdar1 FBgn0010399 FBtr0078763 3 1 1 80 3R 1336381 1337111 GAAGAAGGGCAAGCTTATGG 59 1336320 1336341 GTAACTAGTTCGCAATCCTTGG 59 NA Drosophila melanogaster 61 katanin-60 FBgn0040208 FBtr0078827 3 1 1 80 3R 1056925 1057786 CCATAACCTTACTGCGAGGT 59 1056864 1056883 CTTCAAACGTAGTCTTGGCC 59 NA Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 2 2 2 106 3R 992798 992886 ACAATCGGAACACGATTGG 58 992956 992974 CAACTGCATAGAAGCTGCC 59 NA Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 1 1 1 60 3R 758294 758453 CCAATATCAAGTTCAAGAGCC 57 758475 758493 CTCTGATATCACCGCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 2 2 2 88 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216887 216906 ATTGGCCGTACAATAATGCT 58 NA Drosophila melanogaster 61 TwdlF FBgn0037224 FBtr0078975 1 1 1 99 3R 72798 72875 GTTCTAATGTGCCTGGTGG 58 72938 72956 TCAGAGGACGAAGATTGCC 59 NA Drosophila melanogaster 61 CR32385 FBgn0047205 FBtr0076899 3 1 1 86 3L 6970038 6970057 TATGTATAAGGTCGCTCGCT 58 6970101 6970286 GAGTAAGAACTCGGATATCAACAC 59 NA Drosophila melanogaster 61 CG40053 FBgn0058053 FBtr0111154 3 1 1 108 3L 24004412 24004430 TGCGTTGTCCCTAGTTCTG 59 24004250 24004340 CACTGAAACCACATTCCGA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620 1 1 2 86 3L 22980816 22980834 ATTGGTAAAGACCACACCG 57 22980881 22980968 GTTGTAATGATTGACTTGGACC 57 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 2 3 3 80 3L 21832003 21832172 CGACTTTATACGAATGAATGCC 58 21831944 21831964 TTCGTGACCTTTATGTTCTCG 58 NA Drosophila melanogaster 61 CG33292 FBgn0053292 FBtr0078428 2 1 1 89 3L 21651542 21651560 AGAAGAGTGCTCCTTCAGC 59 21651613 21651631 AGTTCTTGAGGGAGATGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 capaR FBgn0037100 FBtr0078379 1 1 1 80 3L 21552988 21553085 CGTTCATTCTGTTCACGTC 57 21552926 21552944 ATCAGCACCCTATTTGCAG 57 NA Drosophila melanogaster 61 CG7338 FBgn0037073 FBtr0078342 2 1 1 106 3L 21330466 21330541 TAAGCATAAGTTCGAACGCT 57 21330610 21330628 GATTCACCTTGAAGGCCAG 58 NA Drosophila melanogaster 61 Cpr78Cc FBgn0037069 FBtr0078338 3 1 1 127 3L 21293724 21293813 TTTAAGCTATCGCTCTGCCT 59 21293903 21293921 TATTGGTAGTTGCCCTCGG 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 2 3 3 81 3L 21257019 21257037 AATGAGGCGACATTGACAC 58 21257079 21257158 TGACAAAGTCAGAATCGTAGAG 58 NA Drosophila melanogaster 61 fng FBgn0011591 FBtr0078267 2 1 1 80 3L 20936713 20936733 GACGAAGAACTATCACGACAC 58 20929804 20936671 AAGAACCAGGTCTGATCGC 59 NA Drosophila melanogaster 61 CG5195 FBgn0036995 FBtr0078223 3 1 1 80 3L 20449830 20449848 GAGGAGCATCAAGGAACGT 59 20449713 20449788 CAATCAATCGGATTCCCATCC 59 NA Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 3 2 2 80 3L 20439490 20439854 AATTTAACGGCTCAAGAGGTC 58 20439896 20439914 CGCCTAGGCAATACTTTGG 58 NA Drosophila melanogaster 61 CG5498 FBgn0027565 FBtr0078238 3 1 1 88 3L 20376031 20376120 AAAGAATCATGAACGTCGCAG 59 20375963 20375981 GAACAACGCCACTGTTCTG 59 NA Drosophila melanogaster 61 obst-F FBgn0036947 FBtr0074860 1 1 1 100 3L 20194438 20194583 CTCAGCCATATCTGCTTGG 58 20194356 20194374 TAGAGTAGAGTGGGCACAC 58 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920,FBtr0302047 3 2 2 143 3L 19889937 19890020 TAATCAATTTACCGCCTGCA 58 19888054 19888073 CACTCGTTGTGGAAGTAGAC 58 NA InUTR Drosophila melanogaster 61 Kap-alpha1 FBgn0024889 FBtr0074881 3 1 1 92 3L 19802026 19802044 GCTACCTGTCAGATGGTCC 59 19802099 19802185 GCTGAGGATGTAATAGCAGC 58 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 2 3 3 82 3L 19789420 19789440 GGCCACTATGACAGTAATGAC 58 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302334 2 1 6 82 3L 19685470 19685832 ATGTGCTCGAGAATGTACCA 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA InUTR Drosophila melanogaster 61 Max FBgn0017578 FBtr0075018 1 1 1 85 3L 19256241 19256259 ATGAGGCGGAAGATCAGTG 59 19256109 19256194 AGTGCTTGTATCTGCTTAGCT 59 NA Drosophila melanogaster 61 CG10419 FBgn0036850 FBtr0075032 2 1 1 123 3L 19093097 19093166 GATGTTGGACAATCCCGAG 58 19092992 19093013 CAACTCCTTACGAAGAACTAGG 58 NA Drosophila melanogaster 61 CG6836 FBgn0036834 FBtr0075023 2 1 1 105 3L 18947670 18947689 GGCGGTGCAACTAAATACTC 59 18947755 18947837 TTGCCATACCATGTATCTGGA 59 NA Drosophila melanogaster 61 Cat FBgn0000261 FBtr0075058 2 1 1 103 3L 18820345 18820460 ACTACTTTGCTGAGGTGGA 58 18820527 18820545 GTAGGAGAACAGACGACCA 58 NA Drosophila melanogaster 61 not FBgn0013717 FBtr0290259 3 1 1 99 3L 18613423 18613444 GCGATTACTTTATGTCAGATCG 57 18613278 18613363 CCGGAATAGAACTCCTGGA 58 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 1 2 2 198 3L 18033743 18033761 TTACGTATGTCCTCGCAGG 59 18034086 18034106 TGAGAATATCCAACTCTGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Adgf-B FBgn0036751 FBtr0075193 2 1 1 67 3L 17742652 17742671 GTGTGGTCGAGCAATATGTG 59 17742542 17742560 GCCAACCATGAAGTTAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 Mip FBgn0036713 FBtr0075241 3 1 1 124 3L 17339143 17342487 ATAGTCAGCTATGGCTCACAC 59 17339039 17339057 CATTAGAGGGTGGACTGCC 59 NA InUTR Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 2 2 2 117 3L 17233853 17233871 CCGATATGATGGGTGGAGG 59 17233700 17233772 GCAACATCCTTGAAACCCA 58 NA Drosophila melanogaster 61 Cpr73D FBgn0036680 FBtr0113176 1 1 1 90 3L 16933799 16933817 GACGATCCATCCTACAGCT 58 16933675 16933750 AGTACAGACCTCTTATCCTATTCC 58 NA Drosophila melanogaster 61 CG32161 FBgn0052161 FBtr0075331 2 1 1 60 3L 16839987 16840005 GGATCTGACACTTCAAGGC 58 16840028 16840047 GGAATTGGACATGTCTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 1 1 1 77 3L 16719153 16719232 CCCTCATCATGAAGAGCCT 58 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32163 FBgn0052163 FBtr0075310 3 1 1 60 3L 16580510 16580530 CCGAAGAACGTATTCCTTGTG 59 16580551 16580570 TAGGGTGTGGTTACTTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32160 FBgn0052160 FBtr0075367 3 1 1 179 3L 16302589 16302607 TCTGGAGAAGTACTTCGGA 57 16302991 16303009 GGCCGAGATTAGCATAACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33687 FBgn0053687 FBtr0091667 3 1 1 92 3L 16191402 16191421 CTCAACCTTCATCAATGCCT 58 16191546 16191564 AAGAATGCCCTTTCCAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG33795 FBgn0053795 FBtr0091799 2 1 1 107 3L 16164347 16164428 GGAGATTAAGTCAGTATTCTGTCAC 59 16164264 16164282 GATTGACAGCCTTCAAGCG 59 NA Drosophila melanogaster 61 Hip14 FBgn0259824 FBtr0075518 1 1 1 80 3L 15983090 15983108 GGGTGTGCTTCCTTAAGTC 58 15983149 15983238 CAATGATGGTCTTAAATCGCTG 58 NA Drosophila melanogaster 61 CG6244 FBgn0036531 FBtr0075502 3 1 1 113 3L 15801529 15801547 CAAGTCCAAACGCAAAGGA 59 15801621 15801695 GCCTTATCTAGTTTCGCTTCAC 59 NA Drosophila melanogaster 61 mrn FBgn0261109 FBtr0075595 3 1 1 236 3L 15573357 15573375 ATACTGTTCGTGGATCAGC 57 15573084 15573102 CTTATCCAGCGTGTTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6498 FBgn0036511 FBtr0075562 1 1 1 80 3L 15567556 15567639 GTTGGAAATGTACCGGTCTC 58 15567681 15567700 GTGCTTGAGACCATGTAGAG 58 NA Drosophila melanogaster 61 CG7739 FBgn0036509 FBtr0075596 2 1 1 82 3L 15555893 15555913 TTTCAATTCCGACGAACTCAC 59 15555772 15555849 CCGTATAGTGCCCGAAGAG 59 NA Drosophila melanogaster 61 CG7857 FBgn0026738 FBtr0075605 1 1 1 80 3L 15497370 15497388 AATATACCCTCCGATGGCG 59 15497247 15497327 AACACTGTGACCTGGAAGAG 59 NA Drosophila melanogaster 61 ran-like FBgn0036497 FBtr0075616 1 1 1 60 3L 15478023 15478042 TCGCAAGACAAACATTTACC 57 15477982 15478003 CTTCTCCACGTTATAGTTCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32847 FBgn0052847 FBtr0075639 3 1 1 60 3L 15115074 15115098 CCCTATCATCTTATCTGGATATGGA 59 15115116 15115134 CTTATGCCGTGATCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stwl FBgn0003459 FBtr0075728 3 1 1 168 3L 14402716 14402734 CTCCGAAGTTGGAGAGTCG 59 14399789 14399808 TATGTTTAGATGGCGGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG13482 FBgn0036419 FBtr0075744 2 1 1 263 3L 14322565 14322583 TGTTTGGAATCCACCTTGG 58 14322810 14322828 GATGTCCATGGTGAGGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6661 FBgn0036403 FBtr0075770 1 1 1 60 3L 14029514 14029533 GCTCCATATTCGCAAGTCAG 59 14029555 14029574 GACATTCGCAGTTGGTTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hml FBgn0029167 FBtr0075753 2 1 1 80 3L 13851955 13851978 GAACGATTCTACGAAGTAAAGACC 59 13852016 13852096 CAGATCCTTGGGAGGTACAC 59 NA Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751 1 1 2 226 3L 13837017 13837132 GATATGTGGCTTGCTGCTG 59 13837319 13837340 TGGTTAGAAAGCAATAGGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10191 FBgn0036354 FBtr0075863 3 1 1 75 3L 13382107 13382126 GACAAATTTGCTACCGGTGG 59 13381984 13382002 GCGAAGCATCATAGGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Acp70A FBgn0003034 FBtr0075836 1 1 1 112 3L 13294750 13294769 GCTCTATTCTTGGTTCTCGT 57 13294843 13294927 CACTTATCACGAGGATTGGG 58 NA Drosophila melanogaster 61 CG32118 FBgn0052118 FBtr0075889 2 1 1 60 3L 13091355 13091375 CCATTGATGTGATACAACTCG 57 13091395 13091415 AGAAGACTACTAGGGTTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7248 FBgn0036229 FBtr0076043 1 1 1 187 3L 11947195 11947216 CAAGACTTTGTGACATTCACAC 58 11947451 11947469 AGCCAAAGAATAAACGGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14126 FBgn0036223 FBtr0076068 1 1 1 80 3L 11930118 11930138 CAGCATATCAAGCACTGTTCC 59 11929754 11930081 CTGCAGATATAGTTGCTGATAGTC 59 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 2 4 4 93 3L 11873251 11873328 GCATCACAGTGTGATAATTCC 57 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 2 2 6 114 3L 11810737 11811190 AAGCCTGGTCCTACAACAC 59 11810641 11810659 TAGTTCACCATGGGTGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32087 FBgn0052087 FBtr0076117 1 1 1 60 3L 11725407 11725425 GCTGGAATGGAAGTCTCTG 57 11725447 11725467 GCCACCATACTTCAAAGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6038 FBgn0036198 FBtr0076123 3 1 1 81 3L 11704243 11704334 TCTAATTCACGAGGGCTCTG 59 11704181 11704199 CCGCCAGTTAAACTTCTCC 58 NA Drosophila melanogaster 61 CG33267 FBgn0053267 FBtr0089845 2 1 1 144 3L 11557926 11565513 ACTACAGATGATGCCACCA 58 11565621 11565639 TGCGCTTATAGTGGATCAC 57 NA Drosophila melanogaster 61 CG6149 FBgn0036158 FBtr0300274 2 1 1 60 3L 11428118 11428137 TGGAGTTGGGTATTACACGA 58 11428077 11428095 CCCAGTCCAGTGAATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7573 FBgn0036153 FBtr0076171 2 1 1 212 3L 11304959 11304977 TCAGATCGGCATGAGTGTG 59 11305152 11305244 TGTTTATCCTTGGAGGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 2 3 3 80 3L 10889924 10889943 ACGACAAGGATGGATTTAGG 57 10889709 10889882 AGGTTACCAAGAGTACCTCC 58 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 2 1 1 112 3L 10883143 10883318 GCAAAGATGTTCCGCTACC 59 10883394 10883412 ATGTCGGAACCGATCTTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 2 1 1 60 3L 10145183 10145253 CAATATGATGTTCGATGAGAGC 57 10145273 10145292 GAAATAGGCCATGTTCACCA 58 NA DesignNoJunction Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 1 2 4 179 3L 9707710 9708848 TTTGTGCGAAGAAGCAGTG 59 9708990 9709009 GTCTTCTCAGTCGATGTGGT 59 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 2 2 4 164 3L 9707710 9708851 TTTGTGCGAAGAAGTGACC 58 9708979 9708997 GATGTGGTAATTGGTGGCG 59 NA Drosophila melanogaster 61 CG33702 FBgn0053702 FBtr0091690 3 1 1 94 3L 9506191 9506210 CAGACCAGAGCAATATCCGA 59 9506043 9506139 TATCCTTCTCTGTATATGGACACG 59 NA Drosophila melanogaster 61 Hsp23 FBgn0001224 FBtr0076453 3 1 1 60 3L 9375422 9375442 TTCATCACTCGTCACTTTGTC 58 9375463 9375482 CCTTATCAGCCTCATAACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp67Ba FBgn0001227 FBtr0076495 3 1 1 60 3L 9372137 9372155 GTGAGCATGAATGTGAAGC 57 9372095 9372114 AGTTATCGATGGTCTTGACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Srp68 FBgn0035947 FBtr0076517 2 1 1 91 3L 8969420 8969439 GCGTACAATATCTACTGGCA 57 8969493 8969569 GTTGAGCTTAGCCTGTTCC 58 NA Drosophila melanogaster 61 CG5660 FBgn0035942 FBtr0076560 3 1 1 181 3L 8955233 8955313 CTTACTTGGAAACAACCAAACC 58 8955073 8955093 GTAGTCGGACAGTTTAAGCTC 58 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 1 7 7 80 3L 8900034 8900179 CGTTTACGTGATAGGATGGTG 59 8899974 8899992 GCATCTCCTGCAAATGAGC 59 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209,FBtr0300208 2 2 2 80 3L 8889166 8889239 ACTGCAATATGGGATGGGAG 59 8889105 8889125 AGGAATCCAAACGAATCTGTG 58 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 1 4 4 120 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727222 8727351 GGACAAGTTCTTGACTTCGAC 59 NA Drosophila melanogaster 61 SrpRbeta FBgn0011509 FBtr0076598 1 1 1 87 3L 8712804 8712822 TATAAACACCGTGCCAAGG 57 8712678 8712753 TGTACAGAAAGTCTGCCAC 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089566,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089562,FBtr0301155 1 8 13 80 3L 8630668 8630688 CTATCAGCCCAATAGATTGGT 57 8631287 8631377 GTGTTTACCACATTGTACGG 57 NA Drosophila melanogaster 61 CG6683 FBgn0035902 FBtr0076655 1 1 1 109 3L 8507732 8507808 ATTCAGAAGCTAGTGCCTG 57 8507641 8507659 CAGAAGACTCCAATCGGAG 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076671 3 1 9 89 3L 8351170 8351188 TATCGCCTGTGCTTAGGAC 59 8351019 8351118 CATACCACACTTGAGTGCTC 58 NA InUTR Drosophila melanogaster 61 CG13670 FBgn0035873 FBtr0076708 2 1 1 92 3L 8314325 8314901 AGGAGTGTACAGCGTAGTC 58 8314957 8314975 GTAATGACCTCGGCTTGGA 59 NA Drosophila melanogaster 61 Rab-RP3 FBgn0015793 FBtr0076705 2 1 1 85 3L 8291095 8291113 TGTTCGTGATGGAGACCTC 59 8291161 8291228 GTGTTGGCGTTTAAGTTCGT 59 NA Drosophila melanogaster 61 CG8012 FBgn0040832 FBtr0076699 1 1 1 182 3L 8208624 8208711 TCTTGATGTTCGCATTGTGG 59 8208856 8208874 CATAAACCGGTGCATACGC 59 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 3 1 2 84 3L 8195745 8195763 GCAACAACGTCTTCAACTG 57 8195811 8196035 GATACATGCAGCTGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 1 2 2 97 3L 8126880 8126957 TACCAGAGTCAATAGCAAACC 57 8126803 8126821 TAAGCTCCAACAGATTGGC 57 NA Drosophila melanogaster 61 exex FBgn0041156 FBtr0076751 1 1 1 90 3L 7943440 7943458 AGGAGGACATCCCTACCAG 59 7943512 7943665 CATGGGTATCGGAATGGGT 59 NA Drosophila melanogaster 61 sphinx1 FBgn0052383 FBtr0300363 3 1 1 81 3L 7431796 7431817 GATATCCTTCGGTACACATACG 58 7431666 7431757 CATCCTTGTTAGAATCCCACTC 58 NA InUTR Drosophila melanogaster 61 Cpr65Ec FBgn0035737 FBtr0076909 3 1 1 136 3L 7086386 7086478 GAACAAATTCTTCGTCCTTGC 58 7086574 7086594 TCTGGTACTGATAGGCATAGC 58 NA Drosophila melanogaster 61 Cpr65Ea FBgn0035735 FBtr0076929 3 1 1 191 3L 7079582 7079666 GTACAAGCTCCTTCTCGTC 57 7079409 7079427 TAGGAGTACGATCCGTGAG 57 NA Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 3 2 2 91 3L 6734865 6734883 ATCATGGTGGGAGATACCG 58 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 CG32396 FBgn0052396 FBtr0076969 3 1 1 135 3L 6524012 6524083 GAGATTCTTTCTGGCACGTG 59 6524181 6524199 GCATAGAACCGTTTGCTGG 59 NA Drosophila melanogaster 61 LanA FBgn0002526 FBtr0077014 1 1 1 80 3L 6204764 6204840 AAGTTCACGATTACGACCGA 59 6204703 6204724 ATCATTGTACTGCTTCAAGGGA 59 NA Drosophila melanogaster 61 Cpr65Az FBgn0035686 FBtr0076996 1 1 1 110 3L 6154202 6154220 AATGGAGGATCTTCGGGAG 58 6154288 6154368 GTACTCGTACATATAAGAACCATCG 59 NA Drosophila melanogaster 61 Lcp65Ab1 FBgn0020644 FBtr0076994 1 1 1 60 3L 6142948 6142966 GCTGATGAGAACGGATACC 57 6142990 6143008 CTTAAGCAACTGGTGCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-leu FBgn0027085 FBtr0073348 3 1 1 85 3L 4826035 4826109 GGAATGATAATCCAGAGCTAACC 59 4826152 4826172 ATTGAACTGTCCTCCACTGAG 60 NA Drosophila melanogaster 61 CG7509 FBgn0035575 FBtr0073362 1 1 1 80 3L 4804632 4804710 TGGTCAACATAGATCTTTCGC 58 4804572 4804592 ACTCTTTAAGCACGGTTAGTC 58 NA Drosophila melanogaster 61 CG13721 FBgn0035554 FBtr0073328 3 1 1 83 3L 4497269 4497422 CAGTTACTACGGAATTGGTTATCC 59 4497209 4497230 TAGAAGTAGTGTCCATAGTGCC 59 NA Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 2 1 1 115 3L 4292741 4292850 GTTGTTAACATAACCTTCGTGC 58 4292926 4292944 CCGAAACCATCCAGATCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Teh3 FBgn0040697 FBtr0073257 3 1 1 60 3L 4184366 4184388 CATCCAGATCTATGTGAATCTGC 59 4184328 4184348 GGTGCAGTTCTGGAATATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 2 2 2 60 3L 4034505 4034525 CAGCACATTAACATGATCACC 57 4034547 4034625 TCATAATGTGCTCCACCAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 2 2 2 83 3L 3463216 3463235 AAGACAGACTTGCCTACAGG 59 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 CG42456 FBgn0259933 FBtr0300240 3 1 1 83 3L 3319832 3319850 GATATCTGCAATCGCCGTG 59 3319897 3320524 ATGGGATTGCCTTCATCGA 59 NA Nonspecific Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 3 5 5 82 3L 3312394 3312525 CCATATTAGGTGCCGTAACC 58 3312570 3312588 AGTGGATACCCTCGTTGTG 59 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 2 5 5 86 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131026 3131120 TGGTTGAGAGTCGATATTATGGG 59 NA Drosophila melanogaster 61 Atg2 FBgn0044452 FBtr0072970 1 1 1 249 3L 2774386 2774404 GATGGTCACTTGCTACTGC 58 2774698 2774716 ATCCCAGGGATTGAACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16985 FBgn0035355 FBtr0072929 1 1 1 160 3L 2599824 2599906 TGTCGAAAGGATCCCATCC 59 2600030 2600048 CTTTCCATCGGACTTACGC 58 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072922 1 1 3 171 3L 2488883 2490993 CAGACATTAGTGATGTGATGTC 57 2491125 2491143 GTATTCCGTGTAGTCCGTC 57 NA InUTR Drosophila melanogaster 61 CG13806 FBgn0035325 FBtr0072879 1 1 1 188 3L 2266521 2266611 TAGTGAGCGTGTTACTGCT 59 2266763 2266781 ATTCCACGGGAATGTTCAC 58 NA Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072871 3 1 2 145 3L 2197387 2197467 GTTATCTGGCGATAGTCAGC 58 2197575 2197593 CAGGATGATCAGGTTGGTG 57 NA InUTR Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072871 1 1 2 143 3L 2197388 2197468 TTATCTGGCGATAGTCAGCC 59 2197574 2197592 AGGATGATCAGGTTGGTGG 59 NA InUTR Drosophila melanogaster 61 CG5704 FBgn0026570 FBtr0072915 3 1 1 172 3L 2170685 2170833 CACTGAGCGATTTCGAAGC 59 2170531 2170553 GCAGAGTACTCCTAGATAGTCAG 59 NA Drosophila melanogaster 61 mRpL46 FBgn0035272 FBtr0072776 1 1 1 60 3L 1777727 1777745 AGCATGAACGTGAGATCGT 59 1777769 1777787 AAGTCCACCTGGATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht2 FBgn0022702 FBtr0072795 3 1 1 97 3L 1753507 1753525 CATGTGCTACGACTACCAC 58 1753301 1753447 TGGAGAATTTCACACTCAGC 58 NA Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798,FBtr0072799 3 2 2 80 3L 1723694 1723777 CTGTTGTGATGGCTACATCG 59 1723633 1723651 GAGATGCATCTACCGTGCT 59 NA Drosophila melanogaster 61 Bro FBgn0013755 FBtr0072760 1 1 1 61 3L 1647948 1647966 GAATGATCCCGCCATACGA 59 1647990 1648009 GAAGATGAATCTGGGCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32319 FBgn0052319 FBtr0072714 2 1 1 60 3L 1471713 1471731 ATCTATGCTTCTTCGCCCT 58 1471671 1471690 TCCAACTTGCACACTATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072676 3 1 2 116 3L 1331066 1331085 CAATTGGTGCGCAGATACTC 59 1331164 1331291 CTCAACGTTGAGCTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 1 1 2 154 3L 1330961 1331294 AAAGCTCAACGTTGAGTCG 58 1331410 1331430 CGTACTTAATAATGTCGGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972 2 1 2 111 3L 258394 258470 GCAGAACTTGAAGATCCAAGAG 59 258542 258560 GTCATCGTCCGAGAAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 2 3 3 80 3L 185058 185138 GAACATCTTTCAGTACGCTGG 59 185178 185198 ACCAATTTAGGAGCTAGACCG 59 NA Drosophila melanogaster 61 CG12483 FBgn0040688 FBtr0072540 2 1 1 60 3L 98286 98304 TTACTTGGGTGATGCTTCG 57 98104 98122 ATAGCCTCGGGTTGATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-3378 FBgn0082963 FBtr0113518 3 1 1 62 2R 17217232 17217250 TGCTAAACTAGCATGGCGA 59 17217276 17217294 GTATGCGGCATTATAGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1180 FBgn0086658 FBtr0091640 3 1 1 62 2R 7478957 7478975 AATGTCTTGTCTATCGCGC 58 7478913 7478936 GCAAGTTACTAAATGCTCTAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30029 FBgn0050029 FBtr0088109 2 1 1 60 2R 7133652 7133671 TCTCCACGAAATCACTGACC 59 7133691 7133712 ACGATGGACAGAAGGATTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30370 FBgn0063356 FBtr0088797 3 1 1 82 2R 4153681 4153699 CAGAGTGTTCGACTTGGAG 57 4153741 4153820 CGTAGGTTTAGCTCTCATATCAG 58 NA Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113119 3 1 3 134 2R 20849262 20850517 CGTTGATAAGATGAAACTGCCT 59 20849149 20849167 ATGGCACCAGTATGGTGTC 59 NA InUTR Drosophila melanogaster 61 CG2790 FBgn0027599 FBtr0072409 1 1 1 91 2R 20835332 20835350 AAGAGCGCTTTATCCTACG 57 20835198 20835277 TAAGTTGCGAACCTCTTCG 57 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312,FBtr0072313 3 3 3 117 2R 20479589 20479609 TGCTGATCACCATTAAAGACG 58 20479686 20479764 ACATGATCTCTGTACTCGCTC 59 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 1 3 3 80 2R 20308342 20308873 GAGCGGAACTATACATTGGAG 58 20308282 20308300 TACCGTAGAGGTCAGTTGC 58 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 2 2 2 85 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299757 20299775 GCAGAACGATTGACCTCAC 58 NA Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 1 2 2 80 2R 20151606 20151691 CGAGCTGTACTACAAATACTACTG 59 20151730 20151748 CAGATGAGCCTCTTCTTGC 58 NA Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 3 2 2 80 2R 20046438 20046510 AGCTCTCCAAATTGTACCAC 57 20046377 20046396 CGGAGATCTGAACAAATCGG 58 NA Nonspecific Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 3 2 2 209 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044667 20044685 TGGGATGTTCACAGGAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5539 FBgn0034907 FBtr0072123 1 1 1 60 2R 19692904 19692923 CCCTTAGGACTTCCGATCTG 59 19692945 19692964 GAAGTTCTGCCTCCAATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 1 3 3 60 2R 19587831 19587850 AAGGCGGAGCTCTTTAAGAG 59 19587733 19587755 CGTAGAATGATATGATGGACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 1 2 2 133 2R 19576225 19576468 GGATGTAAACACATTCAACGAG 58 19576561 19576580 TGTAGAACATGTTCGATCCC 57 NA Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072100 1 1 2 168 2R 19572655 19572674 AAGTTCGAGGTCATTCTGGA 58 19572444 19572524 GGTTGACATCACTTGGCAG 59 NA Drosophila melanogaster 61 Or59c FBgn0034866 FBtr0072020 1 1 1 80 2R 19360403 19360422 TCCGAAACTCAGTGAGATGG 59 19360287 19360360 TGGGAGCACTGTATGATGG 59 NA Drosophila melanogaster 61 Or59b FBgn0034865 FBtr0072021 2 1 1 113 2R 19358396 19358475 GACTATACTGAAATGCTGTGAC 57 19358304 19358322 AAGAAGAACACGTTCACCA 57 NA Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 2 2 2 99 2R 19245612 19245630 CAGAAGACTCTGGACCACG 59 19245693 19245772 CGTCTGCAGTCTTGTTCAG 58 NA Drosophila melanogaster 61 CG9890 FBgn0034814 FBtr0071984 3 1 1 97 2R 18951567 18951585 TATATGGAGCACCGACTGG 58 18951434 18951507 AATTCGTGGGTGTGAAACTC 58 NA Drosophila melanogaster 61 Gmer FBgn0034794 FBtr0071905 1 1 1 141 2R 18776093 18776165 GATTTGACAAATCTGGCCG 57 18775912 18775930 TAATGAGCAGGTTGTTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 2 2 2 273 2R 18728512 18728592 TTCCGGAGTTCGAATGGAC 59 18728828 18728847 ATAGCCAGATGCTCTGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300124 1 1 2 69 2R 18671845 18671863 TCCAGAATGCAGTTAGCCA 59 18671896 18671970 TTTCTACCGGTATCAGCGT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cdk9 FBgn0019949 FBtr0071937 2 1 1 90 2R 18524509 18524528 GAACGTCAAGTTCAGTCTGG 58 18524370 18524456 GTGCAGGATCTTGTTGCTG 59 NA Drosophila melanogaster 61 CG4294 FBgn0034742 FBtr0300409 3 1 1 80 2R 18489310 18489461 TGACTACAGGTTAATCGACG 57 18489249 18489267 TTGTACAGGCGTATCTCCT 57 NA Drosophila melanogaster 61 CG18870 FBgn0042180 FBtr0071688 1 1 1 81 2R 17503364 17503382 TTGGAACTGCATAACGGTG 58 17503234 17503319 CACATCCGATCTGACTCGA 59 NA Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071699 3 1 2 188 2R 17406369 17406443 ACCTTATGAGTGGATCTGGG 58 17406200 17406218 TTCTCTGGACACCATACGA 57 NA InUTR Drosophila melanogaster 61 CG4286 FBgn0034601 FBtr0071627 3 1 1 99 2R 17065772 17065790 CCATGTGCTACCAAGACAC 58 17065629 17065709 GCTTGGTTAGCTCTTCGAG 58 NA Drosophila melanogaster 61 CG15657 FBgn0034595 FBtr0071635 2 1 1 88 2R 17035472 17035550 ATTTCGAGCATTGAACAGGC 59 17035403 17035421 ATCACCATTACCGGGTGAC 59 NA Drosophila melanogaster 61 shg FBgn0003391 FBtr0071546 3 1 1 101 2R 16943410 16943428 CCATCGAGGACATCAACGA 59 16942183 16942201 TGATAGTCATCACCACCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33785 FBgn0061362 FBtr0091786 2 1 1 62 2R 16531121 16531139 ATATCGAAGATCAGGCGCA 59 16531002 16531095 GTGATCCACCTCCTTGAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13427 FBgn0034514 FBtr0086268 3 1 1 80 2R 16426668 16426686 CTTGTGCCAGCTGATATGC 59 16426606 16426624 GTTAGAGACTTGGTCTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10444 FBgn0034494 FBtr0086305 1 1 1 80 2R 16160814 16160832 TGACCCTTTGCTAAAGGGA 58 16160695 16160773 GGATATTGACCCATAGTCTCCA 58 NA Drosophila melanogaster 61 CG11048 FBgn0034487 FBtr0086316 3 1 1 85 2R 16128199 16128217 ATGTGACGTCTTCACGAGG 59 16128266 16128405 CTGTTGTGGGATCACATGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG34197 FBgn0085226 FBtr0112390 2 1 1 60 2R 15289849 15289868 ATCATCGTTAGAACTCGCAC 58 15289808 15289826 GTCGTCTTCTGTTGTACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 1 2 2 80 2R 14686294 14686595 GATTTCTTTAATTCCGAGCGCT 59 14686235 14686255 GTAGCCAAAGAAGAAACTGGC 59 NA Drosophila melanogaster 61 CG42510 FBgn0260236 FBtr0300645 2 1 1 66 2R 14411204 14411747 AATATGCAGGACGACGAGG 59 14411777 14411795 TCTTGACATGACCACCCAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 3 1 1 86 2R 13939215 13939234 TGTTCCAGTCTGACTGAGTG 59 13938861 13939166 CTTGTAGCTGTCGGAGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 UbcD10 FBgn0026316 FBtr0089553 1 1 1 60 2R 13676365 13676386 CTACCATCCAAACATCGATGAG 59 13676326 13676346 GTTCTCCGTACTGATAATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 1 3 3 82 2R 13577313 13577390 ATCTTGAGATCCAACGACTC 57 13577435 13577453 ATCTGATGGGTAGGTTCCT 57 NA Drosophila melanogaster 61 mthl4 FBgn0034219 FBtr0086957 2 1 1 101 2R 13333412 13333489 GATCTACACTGGCGATATGAC 58 13333331 13333350 ATGTAAATCGCCGAAAGGAC 58 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086992 3 1 7 80 2R 13239799 13246820 GACAGATTAGAGACCTCACCTC 59 13246860 13246879 GTTGATGTTGTTCAGCTGGT 59 NA Drosophila melanogaster 61 CG8303 FBgn0034143 FBtr0273388 1 1 1 80 2R 12483992 12484011 GAATCTGTCGGAGAATTTGC 57 12483878 12483951 GTTCCATAAACAATCGATGGC 58 NA Drosophila melanogaster 61 krimp FBgn0034098 FBtr0087189 1 1 1 152 2R 12126622 12126640 CAGTTCTTGGCTTTCGTCC 59 12126417 12126435 GAGCTCTAGCTAGCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114474 2 1 3 88 2R 12084063 12084200 ACAGCAAACCAGAAGTTGG 58 12084252 12084270 TCTTCGGGATCAATTGGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 3 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 Hr51 FBgn0034012 FBtr0114456 3 1 1 90 2R 11219142 11221093 TCTTCTCAAGAACTCCACAGTC 59 11221144 11221162 CCGTTGATGTAGGTGGAGG 59 NA Drosophila melanogaster 61 CG42254 FBgn0259112 FBtr0299540 3 1 1 81 2R 10657916 10657934 AAGGTGGTGTAAACAGCCA 59 10657792 10657812 CGGAATCGCTAGTCATATGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12863 FBgn0033948 FBtr0087500 1 1 1 109 2R 10508299 10508370 GGAGCTAGCAAGGTTATATGC 58 10508210 10508230 CCCAGATATTCGGCAAATCTC 59 NA Drosophila melanogaster 61 CG34185 FBgn0085214 FBtr0112378 2 1 1 80 2R 10261686 10261765 TTGGACCTGAATCCTATGAAGG 59 10261627 10261649 TTATATCCTCATCCACCTCATCC 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 2 4 4 81 2R 8467283 8467301 CTCGAATACGTTCGAGGAC 57 8467118 8467238 GGAGACAACCTTATCCAGC 57 NA Drosophila melanogaster 61 CG30047 FBgn0050047 FBtr0087905 2 1 1 80 2R 8241560 8241637 CACGATCGAGGATACTATTGG 57 8241674 8241697 GTAGAATAGGTAGCAGAAGTACAG 58 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087903,FBtr0087902,FBtr0301874 3 3 3 60 2R 8226602 8226622 CTGTGGCATCCATGTTATCTG 59 8226640 8226662 CTCGTATCTGTTTAGGTAATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 1 2 2 93 2R 8156864 8156882 GAAACTCACAGACGAGGAG 57 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 skpB FBgn0026176 FBtr0088020 2 1 1 152 2R 8027415 8027491 AGAGATGCCCATCATTCGG 59 8027281 8027299 GAGTTGACATTCGGCAACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 2 3 3 123 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855268 7855344 CACTTGGAATGAAGGATCCG 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 3 4 4 105 2R 7269386 7269467 CCGATAAGGTTGATCACGG 58 7269299 7269317 TCCGTGTATGTAACGTCGA 58 NA Drosophila melanogaster 61 CG18335 FBgn0033610 FBtr0088177 2 1 1 91 2R 7178420 7178439 GAATGGACCACGCTATAACG 58 7178285 7178303 ATAAGTTCGACCCACTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7222 FBgn0033551 FBtr0088223 2 1 1 80 2R 6701652 6701671 GTAATGAAGAGCTACTGCCA 57 6701712 6701800 CGTTGATCCAGTACATATCGT 57 NA Drosophila melanogaster 61 CG12338 FBgn0033543 FBtr0088256 2 1 1 111 2R 6618101 6618186 ATTACGCAACAATGGATGACC 59 6618010 6618029 TGCGGGAGTAAATATAGCCG 59 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 3 3 3 94 2R 6527873 6527891 GTCCTTGGATGACCTGGAG 59 6527947 6528031 ACTGTCGATGATGTTCTTCGT 59 NA Drosophila melanogaster 61 CG12914 FBgn0033499 FBtr0088334 2 1 1 107 2R 6136356 6136458 CGAGCGTGTTTGTCATAGTC 59 6136527 6136546 AGTTGAGGTAGTACAGCTGG 58 NA Drosophila melanogaster 61 Fmrf FBgn0000715 FBtr0088383 2 1 1 154 2R 5793899 5796654 TTTCAGAGATGGGCATTGC 58 5796772 5796790 TACCAGGTCATTGTCCTGC 59 NA InUTR Drosophila melanogaster 61 CG10459 FBgn0033440 FBtr0088468 3 1 1 60 2R 5595784 5595803 AACAAGGGAATCTACGTGTG 58 5595824 5595844 TGTCGTAGTCGTATTTGAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 3 3 3 80 2R 5468500 5468579 CTACTACGAGGGTTCGGTG 59 5468620 5468641 GGATGATCTCCGAAATAGAGCA 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 3 4 5 98 2R 5398573 5398656 CAAGGGAATGGGCAAAGAG 58 5414803 5414824 CTTCTCTGTATTTCAAGACGGA 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0088605,FBtr0088604,FBtr0088601,FBtr0112897,FBtr0301511,FBtr0088603,FBtr0088602,FBtr0302602 2 10 10 98 2R 5141849 5141869 GAGGATGTTAAGAAACAGGCA 58 5141704 5141790 CAAGTGGTTAATTGTCGGCA 59 NA Drosophila melanogaster 61 Cyp4p3 FBgn0033397 FBtr0088593 1 1 1 81 2R 5129991 5130011 GAGAGCATTGCTCCATTAGTG 59 5130052 5130154 AAACACCAGAGTGATCTTTGC 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 2 3 3 87 2R 5076504 5076583 GTACTTCATGTTCTACAACACC 57 5076438 5076456 TGCAAGCATGTTCATTGTG 57 NA Drosophila melanogaster 61 CG13748 FBgn0033355 FBtr0088656 1 1 1 78 2R 4827990 4828008 AAGAGTACGTTGGAGTGGC 59 4828050 4828068 TAGAGGTCCATGGGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8586 FBgn0033320 FBtr0088725 3 1 1 161 2R 4582747 4583228 AGCACATAGTTTCCCACCA 59 4582604 4582622 GAATCATCCGAGTCTTCGC 58 NA InUTR Drosophila melanogaster 61 CG30369 FBgn0050369 FBtr0088795 3 1 1 63 2R 4146918 4146936 TCCTTTGGTCGAGTTCTCG 59 4146962 4146981 GATGCAAACTTCTGTTCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088822 1 1 2 127 2R 3985934 3985952 TCCTGTTCCTGTACTTGCT 58 3985766 3985784 GCTCAAATTCAGTGGTGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 2 2 2 80 2R 3942532 3943248 CCTATCAAACAGGAGCCCA 59 3942470 3942488 TTCTGTATCGCTGCTTGGA 59 NA Drosophila melanogaster 61 Odc1 FBgn0013307 FBtr0088863 1 1 1 80 2R 3893868 3893887 GACAATGCAGAATCTTTGCC 58 3893927 3894007 GTCCTCCGAAATCTTATCTAGG 57 NA Drosophila melanogaster 61 CG34430 FBgn0085459 FBtr0112731 3 1 1 81 2R 3831101 3831182 TATTAATCCTACAGATGGCCTG 57 3831222 3831242 GGCATAACAAAGTTGTATGGC 58 NA Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0113374 1 1 2 87 2R 3817889 3817969 CCAGTGATAAGCGTTTGGC 59 3817820 3817838 TCGATGAGCGCACTATCAG 59 NA Drosophila melanogaster 61 phr FBgn0003082 FBtr0088839,FBtr0088838 1 2 2 214 2R 3714183 3714201 GAGGACAACACAAAGCCTC 58 3714440 3714459 CAGGTCGTCATAAGTGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1941 FBgn0033214 FBtr0088927 3 1 1 80 2R 3598081 3598101 ATGGCCTTCCTAATCCTATCC 58 3598143 3598212 GCTTCCATAGAACAGCACG 59 NA Drosophila melanogaster 61 Tsp42Ef FBgn0033127 FBtr0089023 1 1 1 128 2R 2914543 2914562 CTAAACGAGATCGGTCAGCT 59 2914650 2914732 AATAATGAACGTCACTGTGCAG 59 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0301713 2 1 3 81 2R 2880551 2880632 GCTCCAAGTGGTAAATTATCCA 58 2880671 2880692 CTCCAGGAAGTTACATAAGTCC 58 NA InUTR Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0086136,FBtr0301420,FBtr0301423 1 6 7 80 2R 2620384 2620464 CTTGGCGGTTATATTCTACGA 57 2620324 2620343 AGCTCGTCATCAATGTTCTC 58 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 3 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662529 TTATATCTTGGGCTGGATACG 57 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 2 5 5 91 2R 1491517 1491766 CAAGTTCGCTCCCTAGAGG 59 1491444 1491462 AGTACTAAAGCTGCTCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113 1 1 2 176 2R 482957 486381 AGCCTAATCGGATTCTGCT 58 486520 486539 TTATACGCATACACGGACAG 57 NA InUTR Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111112 2 1 2 81 2R 434475 447873 TTGTACAAGCAGGTTTCCG 58 447913 447936 CTCGGAGTGAATATAAGTAAGTGC 59 NA Drosophila melanogaster 61 CG15216 FBgn0032978 FBtr0085940 1 1 1 102 2L 22161311 22161697 TATCGAAACTTCTCGGCAG 57 22161763 22161781 ATAATGCTTCTCCTGCGTG 58 NA Drosophila melanogaster 61 CG31703 FBgn0051703 FBtr0085946 1 1 1 81 2L 22102919 22102986 ATACCACGGGATTGGTTCC 59 22102856 22102877 TAGCCTTTCATTATCTCGTCCC 59 NA Nonspecific Drosophila melanogaster 61 ttm3 FBgn0032971 FBtr0085935 1 1 1 60 2L 22080483 22080502 GTCCAGCTCTTTGATCTCAC 58 22080523 22080543 CATCATTTACTTGGTGTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33862 FBgn0053862 FBtr0091866 1 1 1 60 2L 21533462 21533484 CTAGAATTATTCCGCGTCATCTG 59 21533503 21533522 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp39D FBgn0032943 FBtr0273404 3 1 1 113 2L 21356578 21356596 AATACTCACGCAACTCAGC 58 21356672 21356748 AGTGAGCATCTGTATACCCG 59 NA Drosophila melanogaster 61 CG33509 FBgn0053509 FBtr0091449 2 1 1 81 2L 21085576 21085650 AGCTCTTTCCAACGTAAAGTG 58 21085515 21085539 CTTTAGCTTAATGTTCTCCAGTACC 59 NA Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 1 2 2 86 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729657 20729887 GTCGTTATCCAGTTCCTTGG 58 NA Drosophila melanogaster 61 vls FBgn0003978 FBtr0081347 1 1 1 127 2L 20065158 20065176 ATACTGCCTCTTCCTCGTG 58 20064992 20065067 GATCCCAGACATTGAGGGT 58 NA Drosophila melanogaster 61 hk FBgn0001202 FBtr0081180 3 1 1 104 2L 19033336 19033355 ACTATAGCTTGCTGGAGTGG 59 19033196 19033269 ACTGGTTAAGAGCCTGAGC 59 NA Drosophila melanogaster 61 CG31785 FBgn0051785 FBtr0300025 1 1 1 81 2L 18125154 18125176 CTTACGAAATAGGACTGACAGTC 58 18124997 18125116 TGATGATGCCTGTAGTGATAGG 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0100316,FBtr0100313,FBtr0081018,FBtr0081020,FBtr0100314,FBtr0081019,FBtr0100315,FBtr0081016,FBtr0081017,FBtr0081013,FBtr0081015 3 12 12 80 2L 17664139 17664157 TTGATCCGGATAATCCAGC 57 17662270 17664096 GATCCAGAGGCTTTAGTACG 57 NA Drosophila melanogaster 61 CG6412 FBgn0032646 FBtr0080994 3 1 1 147 2L 17499925 17500048 GAGATCTGTGGAAGCTTGG 57 17499796 17499815 TTAGCCTTAAAGCACAATGC 57 NA Drosophila melanogaster 61 CG5110 FBgn0032642 FBtr0080983 3 1 1 60 2L 17481348 17481369 CAAGAAGTATTTAGACGGCCTG 59 17481464 17481486 CGTAATCTGAATAACGTACAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6380 FBgn0032632 FBtr0080970 3 1 1 60 2L 17291272 17291293 TCCTGCTCGTATATGTAAATCC 57 17291233 17291253 GGTCTCTTTCTTAGAAGTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12620 FBgn0032626 FBtr0080953 2 1 1 60 2L 17088024 17088042 TGAGTTCTCAACGGTCGAG 59 17088065 17088084 CGATGACTCTGTGAACTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 3 2 2 135 2L 16843617 16843635 TACACCGATCGGGTAATGC 59 16843382 16843521 TCATAATGGCATACTGAATGCC 59 NA Drosophila melanogaster 61 CG31815 FBgn0051815 FBtr0080870 1 1 1 60 2L 16606183 16606203 AAATACAAGGAGTGTGGATGG 58 16606221 16606243 CACAGACATACGGATAACAAAGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idgf1 FBgn0020416 FBtr0080860 1 1 1 99 2L 16445981 16446070 ACTCCACTTGGTACTTCGA 58 16446133 16446151 TCCTCGGGATTTCGTAGTG 58 NA Drosophila melanogaster 61 CG31820 FBgn0051820 FBtr0080807 1 1 1 89 2L 16006177 16006195 TCAAGCATTTCTCTTGCCT 57 16006055 16006073 GGGCATAGGATACCGATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ku80 FBgn0041627 FBtr0080763 1 1 1 83 2L 15770543 15770616 GCAACTACCTTGAGAGTCG 58 15770478 15770497 GTTGAACTTCTCGTAGTCCT 57 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502,FBtr0112943 2 3 3 80 2L 15650696 15650777 CGCGTAACAATGTTACCGA 58 15650634 15650656 CGCTATTGTACTCACAATACACC 59 NA Drosophila melanogaster 61 wor FBgn0001983 FBtr0080740 1 1 1 91 2L 15425407 15425425 TAAACTCAAGTACAGCCGC 57 15425272 15425354 GTCCTTCATCATGACTTAGGT 57 NA Drosophila melanogaster 61 CG4168 FBgn0028888 FBtr0080716 2 1 1 82 2L 15171531 15172146 CACCGGTTTGAGTTCATGC 59 15171467 15171485 AAGGTCTCATCGTCGACAC 59 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0300845,FBtr0080685 1 3 3 80 2L 14845465 14845486 CTGATCTATTTCTATGCGACCT 57 14845351 14845426 CCAACCAATTGAGTAAGACCA 58 NA Drosophila melanogaster 61 CG42585 FBgn0260953 FBtr0301738 1 1 1 60 2L 14740096 14740118 CTGCGTGAACTATAACCTATGTG 59 14740136 14740156 ATGCTCTTCCGTTTCTATCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr35B FBgn0028871 FBtr0080633 3 1 1 60 2L 14424840 14424859 GAGTATGACTTCCAGTACGG 57 14424799 14424818 CACTCTGTGACTTCACATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33090 FBgn0028916 FBtr0080624 1 1 1 80 2L 14334507 14334525 AGAGGATCCAGAATGTGCG 59 14334568 14341323 AGTAGTAGGCCGCATATCTG 58 NA Drosophila melanogaster 61 nimB4 FBgn0028542 FBtr0080617 2 1 1 92 2L 13968826 13968906 ATTGCTATATGACCTGCGAG 57 13968753 13968772 AGGTCGTCGTATTCTTATCG 57 NA Drosophila melanogaster 61 CG16852 FBgn0028942 FBtr0080507 2 1 1 86 2L 13540993 13541013 TCCCAAAGAGTGAATATGGAC 58 13541060 13541140 CCACGATTTGATCTTCTTGC 58 NA Drosophila melanogaster 61 CG31846 FBgn0051846 FBtr0080504 3 1 1 247 2L 13462047 13462066 CACCCGAGAAGATGTTTGTG 59 13483522 13483540 TTCCAATTCATGGCGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tap42 FBgn0051852 FBtr0080466 2 1 1 81 2L 13367834 13367925 CAGCGAATTTCAGAACAAAGTG 59 13367965 13367985 GAACATGCTAACCTGGTTCAC 59 NA Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477 3 1 2 114 2L 13306159 13306179 TATTGGGAGAATTTACCGCCA 59 13305829 13306086 TATGGATTTCAACGTCATTGGC 59 NA Drosophila melanogaster 61 kek1 FBgn0015399 FBtr0080401 1 1 1 142 2L 12819347 12819365 AACCATCAGAAGCAGGAGG 59 12818960 12818981 GTTTAGTCAGTTCTTGGTTTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0301163 3 1 2 61 2L 12714679 12714698 AAAGTCCTGTCTTTCACTGG 57 12714535 12714655 CTCGCTGATTGCCTTAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 2 3 4 81 2L 12407461 12407564 ACTTCCACCATTAAGGTTGTC 58 12407400 12407418 CCTTAAAGACGCTGTTGCT 58 NA Drosophila melanogaster 61 CG31862 FBgn0051862 FBtr0080350 1 1 1 60 2L 12339150 12339168 TGATCCGGAATGGTAGCTC 59 12339192 12339210 GTGTATGTCATACCCTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr33a FBgn0032416 FBtr0080337 3 1 1 95 2L 12139073 12139091 CGATGACGATTTGGACACC 59 12139150 12139654 GCTTCCGATGTGTTTCCAG 59 NA Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 1 2 2 111 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051538 12051556 CATTATCGGCCATCTTGCG 59 NA Drosophila melanogaster 61 CG12253 FBgn0026148 FBtr0080149 3 1 1 102 2L 10988895 10988913 CAGGGTTCCCATGGATCTG 59 10988977 10989063 TGTTCTGTTCCGTATCAATGC 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 10 10 80 2L 10825998 10826017 CAGGAAATCCGATCTGATCC 58 10825825 10825958 GTAGATGATGTACGCTTTATCG 57 NA Drosophila melanogaster 61 CG18284 FBgn0043825 FBtr0300805 2 1 1 80 2L 10644141 10644354 ACAGATTCAGAGTCAAGGGA 58 10644394 10644415 TGTAAACATGACCTTGGTTCAG 59 NA Drosophila melanogaster 61 RluA-2 FBgn0032256 FBtr0080032 3 1 1 80 2L 10482560 10482631 GAACCAAGTAACGATGCTACTG 59 10482669 10482690 CTTCTTGGAATCAAAGGACCTG 59 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 2 2 2 80 2L 10236971 10236992 GAACCGATTTCAAATTTGAGGG 58 10236533 10236933 GAACAATACCGAAATCTGAGGG 59 NA Drosophila melanogaster 61 CG34159 FBgn0085188 FBtr0112350 2 1 1 127 2L 10203021 10203392 TGGATCAAGGTCTACGAACAG 59 10202914 10202932 ACATGGATGTTCTGCACCA 59 NA Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 3 1 1 104 2L 10191184 10191256 GTTGAGGAACGAATGCCAC 59 10191098 10191116 ATCGCATAGATGCTCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13134 FBgn0032182 FBtr0079968 1 1 1 60 2L 10097797 10097815 CACTTCGACGAGAATCCTC 57 10097026 10097044 CTGATTGCGGCTGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13133 FBgn0032181 FBtr0079969 2 1 1 67 2L 10091747 10091765 ACTGATGATTACGGTGCCA 59 10091698 10091716 TGGGCTCAATCTCGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42367 FBgn0259713 FBtr0299966 2 1 1 80 2L 9930570 9930589 TTACTCATCAGTCGTCTGCA 58 9930632 9930712 CAATGCTGGAATGCAGGAC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0300866,FBtr0290197,FBtr0300870,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 9 9 97 2L 9903932 9904014 CACTTTCAGAGATTGAGTGCT 58 9903855 9903875 CAGACTCATGAGTAACTCCAG 57 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079850,FBtr0079852,FBtr0079851 2 3 3 95 2L 9699155 9699176 CGAGGCAATATTTCTGAAAGTG 58 9698200 9698221 TGCTTATGATCGCGATTTACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9568 FBgn0032087 FBtr0079765 2 1 1 83 2L 9010893 9010911 ATAGTAATGTGCCCACCGT 58 9010958 9011047 TGTGAGTGTAGTTTGCTGC 58 NA Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 3 2 2 80 2L 8940304 8940322 AGACGATTCAGGTCAAGCA 59 8940185 8940260 CCAGATAGTAGGCCCAGTC 58 NA Nonspecific Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 3 4 4 99 2L 8688852 8688933 TTCTTCGATCCCAATGCCA 59 8688771 8688791 GCCGATCTGATATGTAGTCCT 59 NA Drosophila melanogaster 61 Acer FBgn0016122 FBtr0079685 1 1 1 80 2L 8522951 8523447 GCATCTCAGTTGAATGGTCAC 59 8523489 8523507 CAGTTGTCGCTCAAAGTCC 59 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 2 3 3 61 2L 8450834 8450853 GATAGTCTTTCTGTGCGTGC 59 8450727 8450812 AAAGCGCATTTCGATAGTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 1 3 3 60 2L 8450834 8450852 ATAGTCTTTCTGTGCGTGC 58 8450727 8450812 AAAGCGCATTTCGATAGTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 1 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 CG17293 FBgn0032030 FBtr0079650 2 1 1 60 2L 8375350 8375368 AGGTGTCCGTACTGAATGG 59 8375391 8375410 TTTGGATTGAACTGAACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7778 FBgn0032025 FBtr0079606 1 1 1 92 2L 8349603 8349753 AGGTTTCAGTGAATGGCAC 58 8349806 8349827 TGTTCTGAATCTTTAGCTGCTC 58 NA Drosophila melanogaster 61 CG7840 FBgn0032014 FBtr0079598 1 1 1 60 2L 8306486 8306505 GAGGTGGTCATGTACTTCTG 58 8306526 8306546 TCAATCGCCAAATCCTAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34010 FBgn0054010 FBtr0100065 1 1 1 80 2L 8009951 8009972 TTTATGGAGAACAATCTCGCTG 58 8009838 8009913 ACCATGAGGAGATCTTAGACAC 59 NA Drosophila melanogaster 61 Proct FBgn0045038 FBtr0079562 3 1 1 141 2L 7870367 7870385 TCTTGGTTTGGATGACGGT 59 7866127 7866145 TCCTCATTGCTCAACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Rack1 FBgn0020618 FBtr0079565 2 1 1 92 2L 7827119 7827137 CATTGGCCACAATGGATGG 59 7826966 7827063 ACGATCAGGGTCTTGTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42533 FBgn0260486 FBtr0300897 3 1 1 81 2L 7482577 7482596 CACAAGGACGAGAAACAAGG 59 7482452 7482534 CACGTTTGGGATTCTGAACC 59 NA Drosophila melanogaster 61 CG42533 FBgn0260486 FBtr0300897 1 1 1 80 2L 7474493 7476986 CATCACCGGTTAAAGTAGACG 58 7474433 7474454 CCTTGGAGAAGAAAGGAATCAC 59 NA Drosophila melanogaster 61 Wnt6 FBgn0031902 FBtr0079434 3 1 1 247 2L 7343047 7351188 AATCTTAATGCGCGATTCCC 59 7351398 7351416 TGGGATGTTGATCCTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0079414 2 1 2 87 2L 7218847 7218925 CTGAGAATACTCTTCTGATACTGG 58 7218783 7218802 ATTAGTTTCGTACGGATGCT 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11319 FBgn0031835 FBtr0089641 2 1 1 80 2L 6576300 6576318 TGACCTAAAGGATCCGCTG 59 6576150 6576260 CTGAAGTAGTGATCTTCATTGGC 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 2 3 3 106 2L 5946241 5946324 TCACCTGAAGATCCCATGC 59 5946393 5946412 CATACTTCTTGTCCGTGCAG 59 NA Drosophila melanogaster 61 CG7236 FBgn0031730 FBtr0079133 2 1 1 81 2L 5712353 5712371 AAGAGGTTTGTGGAGTCCG 59 5712415 5712491 GCTTCAGGTTCTTCAGTAGC 58 NA Drosophila melanogaster 61 mid FBgn0005511 FBtr0079093 2 1 1 97 2L 5465490 5465898 GGATAAGAACGGACAGATCGT 59 5465957 5465975 GATTCGACGGAATGCTCTG 58 NA Drosophila melanogaster 61 CG14033 FBgn0046776 FBtr0079065 3 1 1 90 2L 5243858 5243876 GATCTTCCACATCACGCTG 58 5243930 5243948 GAGTTGCTGTTCAGCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp28d1 FBgn0031689 FBtr0079062 3 1 1 80 2L 5210678 5210754 CATCGATGAGATCTATGAGCAG 58 5210792 5210813 ACCATTAGTTGTGGAATTCTGG 58 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0079032 3 1 2 91 2L 5050009 5050667 TTTCATCAGTCGAACACGG 58 5049936 5049956 GCACTATTCTCGAACTCATCC 58 NA Drosophila melanogaster 61 CG3887 FBgn0031670 FBtr0079000 2 1 1 122 2L 5011326 5011421 TCCTTTACTGCTACTCCTGC 59 5011506 5011524 AATAGTTTAGACCCGGCGG 59 NA Drosophila melanogaster 61 CG15435 FBgn0031608 FBtr0077441 2 1 1 96 2L 4460072 4460090 ACGAGTTTCTCAACTGGCA 59 4460220 4460238 CATATGTTGCGTGGCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31957 FBgn0051957 FBtr0077514 2 1 1 93 2L 3871860 3872181 CGTTCCTTGTTTCGATGCC 59 3871785 3871803 TTATCGCCCTCCTCAATCG 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 2 11 11 80 2L 3626041 3626060 TTCAGACCATCATGATGCGA 59 3624660 3625999 CTTTGAAGATGGGCACACTC 59 NA Drosophila melanogaster 61 Mad FBgn0011648 FBtr0077616 3 1 1 99 2L 3148119 3148137 AATCCTTCCAACAACTCGG 57 3147817 3148056 CACCCTTGCCTATATGACG 57 NA Drosophila melanogaster 61 Prx6005 FBgn0031479 FBtr0077684 3 1 1 151 2L 2877378 2877620 GCAACTTTGATGAAATCCTTCG 58 2877248 2877268 ACCATCAGGAAAGAGCTTAGG 59 NA Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 2 1 1 60 2L 2848443 2848520 CCTACAGAACGCAAGATGG 58 2848544 2848562 ACGTAGTGAAACGATACCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9960 FBgn0031454 FBtr0100383 1 1 1 60 2L 2758685 2758703 GCTCTACCTACTCCTGCTG 59 2758643 2758667 GCCCTCTAAGTATTTGATAATCTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18641 FBgn0031426 FBtr0301712 2 1 1 94 2L 2411105 2411129 CTTGTTCTCCTATCTAATTGGTTGG 59 2410973 2411056 AATAATTCCCTCGAGCTTTGTG 59 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 2 4 4 88 2L 2224613 2224633 AAATCTACCATCCAGACGGAG 59 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 CG34172 FBgn0085201 FBtr0112363 1 1 1 89 2L 2192798 2192816 CTACCCGATGGACTTTCCA 58 2192665 2192683 AATCTTATCCGCAGGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830,FBtr0077831 2 2 2 84 2L 2153462 2153481 ATACGCCCAATCCTAACGAG 59 2153526 2153610 GGCTCAAAGAACAAGCTTCTC 59 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077867 1 1 3 60 2L 1987612 1987630 GTTTGTTGATCAGCAACCG 57 1986091 1987590 GAGAACCATGTTGATTTGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31670 FBgn0031375 FBtr0077870 3 1 1 190 2L 1952869 1954321 TTTACTTTAGTCCGCGTGG 57 1952697 1952716 CTCCATGATCTTGGCTATCG 58 NA Drosophila melanogaster 61 CG7295 FBgn0031372 FBtr0077891 2 1 1 60 2L 1870753 1870774 ATGAAAGCATAACAGATGGGAC 58 1870792 1870813 ATCGTTACATCTGTGTCATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr22b FBgn0045500 FBtr0100188 3 1 1 124 2L 1792358 1792376 ATTTCTGGTTGTGCATTGC 57 1792201 1792273 CTCGTTAACACTCATTTCTAGC 57 NA Drosophila melanogaster 61 NLaz FBgn0053126 FBtr0077942 2 1 1 106 2L 1361573 1361653 ATCATCACTCGAGTTCGCA 59 1361485 1361504 CTTAACATCTGGGCACTTGC 59 NA Drosophila melanogaster 61 CG14342 FBgn0031324 FBtr0114498 2 1 1 90 2L 1204606 1204625 GATACAACGAGTGTTTCCGC 60 1204678 1204771 GCAAAGGTTCTGTGTACCC 59 NA Drosophila melanogaster 61 disco-r FBgn0042650 FBtr0074251 3 1 1 127 X 16015087 16015313 GAGATACTGGAGGTTGGCA 58 16014978 16014998 GGCATGCTATCAATCTCATCG 59 NA Drosophila melanogaster 61 CR40450 FBgn0085734 FBtr0114183 3 1 1 171 U 2072948 2072966 ATCATTTGACCGGAAGCAG 58 2072667 2072687 ACTAAATAGGGATGTCGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31244 FBgn0051244 FBtr0083772 1 1 1 60 3R 15223759 15223777 GAATTCTGAAGGAGTGCGA 57 15223717 15223739 TCCATGGGTATACTATAGGTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083617 2 1 2 117 3R 14010863 14011271 AAGGAGGATGGAAAGATGCC 59 14010765 14010783 TCTGTACGTTTAGGCGAGC 59 NA Drosophila melanogaster 61 CG14856 FBgn0038261 FBtr0082992 3 1 1 80 3R 10625928 10626007 GTTGTCTTCTCGATAGTGACG 58 10626048 10626067 CATGACGAACGGTGATATGC 59 NA Drosophila melanogaster 61 CG14357 FBgn0038204 FBtr0301280 2 1 1 84 3R 9937617 9937636 TACGGAACCCTGATCAACTG 59 9937496 9937573 TCATTTCATTGGATTCCACGTG 59 NA Drosophila melanogaster 61 Spc25 FBgn0087021 FBtr0082690 2 1 1 101 3R 8787595 8787613 GCGTAAAGGCTTTGTACGA 58 8787676 8787759 CCTTGACATCCAACAAATTGC 58 NA Drosophila melanogaster 61 eIF4AIII FBgn0037573 FBtr0081834 3 1 1 84 3R 4139852 4139931 CATCTTGGTCAAGCGTGAC 59 4139978 4139997 ATCGAATTTCCATTCCTCGC 58 NA Drosophila melanogaster 61 alpha-Est6 FBgn0015574 FBtr0081549 1 1 1 61 3R 3350908 3350931 GTATCACCAAGAGTAACATCACAC 59 3350778 3350799 GTGCCAGAATAACTTGTAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13071 FBgn0036585 FBtr0075461 1 1 1 80 3L 16254916 16255661 GAATCGGATGGTCTGATGC 58 16255705 16255723 ATGCTCAGGTTTCCCTGAG 59 NA Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 3 2 2 81 3L 14932884 14932962 AACTCCAATGGGTCCATGG 59 14933006 14933025 TAGTAGAGCAGTTCTCCGGA 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 6 6 89 3L 6584024 6584042 GAATCCTCCCAAACGTGAC 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 CG18808 FBgn0042131 FBtr0073361 3 1 1 60 3L 4806569 4806590 ACACCATTACTATTTCCTGCTG 58 4806530 4806549 TATCTATCACGGCTGACAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 2 2 2 88 2R 20150927 20150946 GCTGAACATGAACTACTGCA 58 20150994 20151069 CGTAAATGAACCATTGTAGCTC 57 NA Drosophila melanogaster 61 CG30419 FBgn0050419 FBtr0072275 1 1 1 80 2R 20116650 20116669 AAATCTACTTCGAGAGTCGC 57 20103096 20116610 GATACAGCAGTATCTTGTTGGA 58 NA Drosophila melanogaster 61 EfSec FBgn0034627 FBtr0071608 1 1 1 80 2R 17273334 17273411 CACTATTATAGGAGGTGCCCA 58 17273274 17273292 GCTGTTTGGGTTTGTTTGC 59 NA Drosophila melanogaster 61 MED9 FBgn0260401 FBtr0300664 2 1 1 66 2R 14055170 14055188 AAGGATCCTCTGGAGAACG 58 14055216 14055287 GTTCAAAGATCTTGTGGTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 1 2 2 80 2R 11400206 11400225 CTGGACTACTATGTTCGCAC 58 11400268 11401266 ACGAATCAAACCCAATCGG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 1 4 6 94 2R 9150456 9150474 GAAGTCGATTGTGATGCGG 59 9151027 9151045 TTATCGGATGCCAACAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12341 FBgn0033550 FBtr0088251 3 1 1 81 2R 6700501 6700522 CCAAATCCGGCTATAGAATACG 58 6700387 6700459 CCAATATTCATGGACGCCA 58 NA InUTR Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021 1 1 3 88 2L 17971991 17972268 ATTCCGCAAGAAGTTGACC 58 17972320 17972338 TTCGCTTGATTCGTTTCCT 57 NA Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0100163 3 1 2 127 2L 14812255 14812273 CCAAGAGGCAATGTTTGCT 59 14812362 14813399 CACCTATGTATATTCGCCGAG 58 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 3 5 5 80 2R 7203663 7203682 GCAGAAGGATGACATTAGCA 58 7203433 7203621 TTGGCTCGTTGATTATCGAG 58 NA Drosophila melanogaster 61 CG15198 FBgn0030283 FBtr0073447 1 1 1 92 X 11142657 11142675 ATATAGCACCGTCGAGGTC 58 11142731 11142749 GTGTTGTTGGAAGACGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10584 FBgn0037045 FBtr0078327 3 1 1 60 3L 21023857 21023875 AAAGAGGATCACTCGCAGG 59 21023815 21023839 CAGCTAGGATTATATCGCTATTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 3 4 4 86 2R 1925633 1925653 ATTGAGATGGGCTTCAAACTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075336 3 1 2 221 3L 16854020 16854038 ATATGCTAGCCTGCCATCG 59 16854334 16854411 ACCTGTAATTAGTGTGGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 3 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 CG9634 FBgn0027528 FBtr0074359 1 1 1 80 X 16622482 16622586 ACTACCGATATCCTGTAGCTG 58 16622422 16622443 AGGTGGAGAAGTTATCGATCAG 59 NA Drosophila melanogaster 61 CG34433 FBgn0085462 FBtr0112734 3 1 1 60 3R 26475823 26475841 TCAACATGTTCTGCATGGG 58 26475865 26475883 AACACATGCAATTCGATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31388 FBgn0051388 FBtr0082356 2 1 1 80 3R 7065147 7065243 GCATGAAAGGGTTCACATGG 59 7065286 7065304 TCGCTGGGTGTTACATACG 59 NA Drosophila melanogaster 61 CG14687 FBgn0037835 FBtr0082280 3 1 1 66 3R 6618817 6618835 CATTAAGATTCAGGCCGGA 57 6618865 6618883 ATTCTTGCTGGATCGATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycH FBgn0022936 FBtr0078439 2 1 1 80 3L 21816141 21816221 TGATAGCGAACTCTATAAGGAGC 59 21816261 21816279 TGGAATGAGGCATCTTCGG 59 NA Drosophila melanogaster 61 CG42361 FBgn0259707 FBtr0299960 3 1 1 134 2R 20495484 20495502 GGCCAATCCCAACATTGTG 59 20495600 20495676 TTTGCATGGTCATCCTCGA 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994,FBtr0290299 1 2 7 104 2R 13260659 13261335 AACTGAAGATGACAAGGTCGA 59 13261396 13261419 GGTATGTGGTAGTATTTACACTGC 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360,FBtr0113361 1 3 3 81 2R 14319247 14319327 GCTGAAATATTTGGTGGCC 57 14319184 14319205 CAGATAATGATGTACGACATCG 57 NA Drosophila melanogaster 61 CG4404 FBgn0030432 FBtr0073694 2 1 1 119 X 12799064 12799661 GATATCAAGGACACGGTTCG 58 12798964 12798983 TAGGTAGTATTTGCGCTTGC 58 NA Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 2 2 2 144 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461956 19461974 ATTTCAACGTTGTCGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG7332 FBgn0030973 FBtr0074647 1 1 1 80 X 18780767 18780879 CATTTAACCGTTCTGTTCAGC 58 18780921 18780939 TTTGAAGATCCGACGACCA 59 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 2 2 2 81 X 16778984 16779004 CTAAAGTCCCAAGAGATCCTG 57 16779047 16779124 TATTGTCGTCGATGAGCAG 57 NA Drosophila melanogaster 61 CG9914 FBgn0030737 FBtr0074240 2 1 1 170 X 16201881 16201899 CCAACACCATCCTCTCCAG 59 16201487 16201505 TCTTCTTCACCCATTCCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 2 2 2 90 X 13644349 13644367 TAAACAATGTGCCATCGCG 59 13640810 13640829 TAATCACGCATGGTGAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)dd4 FBgn0001612 FBtr0073841 3 1 1 82 X 13636401 13636422 TCTAAGAGAAATCTGCGAGGAG 59 13636266 13636360 TTTGAGAGGCACTAGATTCCA 58 NA Drosophila melanogaster 61 Fer3HCH FBgn0030449 FBtr0073745 3 1 1 67 X 13002025 13002048 CTAAACGATCAGATCAACATGGAG 59 13001919 13001999 TCGAAATGGTAGGCCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 3 2 2 81 X 10780079 10780097 TTACCATATTGAGCACGGC 58 10776554 10780036 CAGCAGATATTCGTTGATTGC 58 NA Drosophila melanogaster 61 CG32698 FBgn0052698 FBtr0071386 2 1 1 81 X 9742677 9742698 TTGATTTCAAGACGACGAAGTC 59 9742736 9742943 CAACTGGTCGCTTTATAGTAGAC 59 NA Drosophila melanogaster 61 CG15365 FBgn0030077 FBtr0071357 3 1 1 97 X 8950549 8950567 TTCTGGGATCTCGGAACTG 58 8950365 8950491 CCTCCTTGTCTTTCTCATTGTG 59 NA Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035,FBtr0071034 2 2 2 165 X 6886130 6886220 GTGCTTCTACAGAAATGTCAC 57 6885985 6886005 CTTCTTGAATAGGAACTCCGA 57 NA Drosophila melanogaster 61 CG15770 FBgn0029803 FBtr0070811 2 1 1 60 X 5659602 5659622 GATAATACCGATGACGACGAG 58 5659643 5659662 AATATAAACCTGCAAGGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 1 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3062 FBgn0025612 FBtr0070692 2 1 1 99 X 4536164 4536234 GTGATAAAGGAGGGCAACTC 58 4536084 4536102 TCAGACAGGCATCGTAGTG 59 NA Drosophila melanogaster 61 Usf FBgn0029711 FBtr0070701 2 1 1 60 X 4441432 4441451 GTACATCAAGAGCATGCAGG 59 4440830 4440848 ATCCGTCTCCCTTAGACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15576 FBgn0029700 FBtr0070661 3 1 1 60 X 4146485 4146506 CGTTTCATGATCAATATGCGTG 58 4146446 4146468 CTCCCATATTTAATTCCGTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6414 FBgn0029690 FBtr0070624 1 1 1 80 X 3863806 3863827 TCGAAAGCTTCTACTTCAAGTC 58 3863661 3863765 ATCCATCCGAGATCAGGTC 58 NA Drosophila melanogaster 61 pn FBgn0003116 FBtr0070389 2 1 1 153 X 2075325 2075346 CCTAACAAATGTGCTTTCTACG 58 2075528 2075546 TCCAAGTCACACGATTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4194 FBgn0025627 FBtr0070328 3 1 1 62 X 1962670 1962690 TGTTTGCTTATGATCCTGGGA 59 1962714 1962732 CAGTTCCTGAGGATTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 3 3 3 106 X 1237551 1237812 GTCACCAAGGCCATAGAGG 59 1237881 1237900 AAGCCCAAGTTCTCGTAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 sc FBgn0004170 FBtr0070073 3 1 1 60 X 290843 290862 AACACGATCTCTGTCAGTCC 59 290885 290903 GATTGAACTGCTGCCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 2 2 2 99 4 1052491 1052511 ACACTTCTCAGTTAGTTCGAG 57 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA InUTR Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 2 4 4 80 4 738494 738512 CCCTAACAGCCTAAGTGCT 59 738550 739918 GATAAGCCATTAATGGTACTGACTG 59 NA Drosophila melanogaster 61 snoRNA:Or-aca3 FBgn0082923 FBtr0113586 2 1 1 61 3R 23749652 23749671 AGCAACTGGCTACTCTTCTG 59 23749695 23749713 TTTATCTGGCAACGCAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 1 1 1 60 3R 15212702 15212815 CTACGACTCAGTTTCCACAC 58 15212835 15212856 AAAGTTTCCAAGCTGAGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085875 1 1 2 80 3R 27892101 27892121 TAGTTGAGGAGTACACGTTGG 59 27884858 27892059 CCTCGTCGTTCTGTAGAGG 59 NA Drosophila melanogaster 61 CG15554 FBgn0039820 FBtr0085736 2 1 1 136 3R 26951971 26952376 TTTGTTTGGCTGTTAACCCT 58 26952475 26952493 ATTATCCGTCGCAACTGAG 57 NA Drosophila melanogaster 61 eIF2B-alpha FBgn0039726 FBtr0085508 3 1 1 91 3R 25760464 25760541 GAGTACAAGTACTCCCGCA 58 25760391 25760410 AAGAGCAGGGTGATGTAGAC 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085528,FBtr0300023 2 2 5 135 3R 25659673 25659691 ATTTAGCTCCCTCGAGGAG 58 25658061 25658926 CGAACGTTTCCTAATTATGCTC 58 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 3 2 2 93 3R 25570535 25570613 GGAAGAAGCTTGCTTAAGGTG 59 25570462 25570482 CGGAGTAGCTAAGATTCTGGT 59 NA Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 2 1 1 60 3R 24857549 24857568 AGAGGACTTTGTCTTTGCTG 58 24857441 24857527 CTTCTTTACGCGATCGTACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31054 FBgn0051054 FBtr0085256 3 1 1 72 3R 23787100 23787118 AAGCCGCTTATAGAGCCAG 59 23787154 23787172 GTGCATCTGTCAAGATGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tau FBgn0051057 FBtr0085197 3 1 1 81 3R 23469686 23470957 GAGACATCAAGATCCAAACGC 59 23469625 23469646 GGCTTGTGCTTTACATTATCCA 59 NA Drosophila melanogaster 61 CG4956 FBgn0039370 FBtr0084920 3 1 1 60 3R 21603823 21603841 TATGGGCCTACTTCATCCG 58 21603781 21603802 AAACAGCAATCCAATCAGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL27 FBgn0039359 FBtr0084932 1 1 1 60 3R 21509985 21510005 AGCCTGAACTACAATCATCTG 57 21509945 21509963 TCTCAAAGCTGATGTCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10562 FBgn0039326 FBtr0084851 1 1 1 150 3R 21147600 21147688 GACAAAGTCAAAGCGTTACAG 58 21147470 21147490 CCTCCTTGATCTTTCCAAAGG 58 NA Drosophila melanogaster 61 RpS27 FBgn0039300 FBtr0084868 2 1 1 162 3R 21072258 21072276 CTACAGGATCACCACCGTC 59 21072048 21072067 AATTTGTGGTTCATCGCGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tnc FBgn0039257 FBtr0084754 1 1 1 80 3R 20835144 20835163 AGAAGTTGCTGATGTTGCAG 59 20837633 20838552 AGCATCCCTCCGAATACTG 59 NA Drosophila melanogaster 61 CG11089 FBgn0039241 FBtr0084710 3 1 1 88 3R 20706391 20706411 GGAGATCTCTAATGCAATCGA 57 20706460 20706538 CCTTATCGAACATTCCCTCG 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0084579,FBtr0084578,FBtr0100518,FBtr0100519,FBtr0100516,FBtr0100520 3 7 7 97 3R 19985254 19985383 ACTCTAGTCGATATGGAAAGCT 58 19985029 19985047 ATAGGGTCCGTTATACGGG 58 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717,FBtr0089715,FBtr0089716 2 3 3 146 3R 19117369 19117450 GATCCTGATGAGGTGGCTC 59 19117241 19117261 GACAAAGCGGTAGACATATCG 59 NA Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 3 2 2 82 3R 18902693 18907083 ACGAGGAGTTGGACAACTG 59 18902629 18902649 TGATGAGTAGGTCCTGTTGTC 59 NA Drosophila melanogaster 61 CG17806 FBgn0038548 FBtr0083527 1 1 1 69 3R 13627735 13627753 TCTCAAGGACCACATCGTG 59 13627628 13627646 GAAGAACGTTTGGCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 rec FBgn0003227 FBtr0083193 3 1 1 124 3R 11656164 11656184 TAAATCCGGTCCTAAACGAGG 59 11650577 11656078 TATCGCAAGAAGTTGCCCT 59 NA Drosophila melanogaster 61 CG6687 FBgn0038299 FBtr0083140 3 1 1 132 3R 11032943 11032961 TCATATCCCGGCTAAATGC 57 11032767 11032848 CCCATTAAGCTGAGGATAGG 57 NA Drosophila melanogaster 61 CG31337 FBgn0051337 FBtr0082790 2 1 1 84 3R 9370324 9370343 GATGTACAAGGAGCACATGC 59 9370091 9370277 CAAATGATAGCCTTCGCGT 58 NA Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082721,FBtr0082720 1 2 2 61 3R 8822946 8822965 GATGTCCAAGGGAAAGACAG 58 8822904 8822922 AGCTCTGGTAGCACATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5999 FBgn0038083 FBtr0302379 3 1 1 111 3R 8568638 8568715 TTGGTACAAGGAAGTTTATGGC 59 8568548 8568566 AATAGGTCCTTCACTGGCC 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 2 2 3 156 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213640 8213711 AGCGAGAAGACTTCCTTCAG 59 NA Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0082607 3 1 2 61 3R 8194941 8194960 GTGTACATCGCGAGTTTCAC 59 8194272 8194292 GCAGGTAGTAGAAGTCAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082562 1 2 3 144 3R 8126223 8126241 GACGCACATTGAATCCCTG 59 8126347 8126615 CTCAATGACTTGTGAGGAGAC 58 NA Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 3 2 2 89 3R 7650662 7663897 ATCATTTGAGGCTTCAACAACC 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082473 3 1 2 241 3R 7645124 7645289 GCGACAGTTATAAACGTGTCC 59 7645558 7645576 AAGTACTTCTCGTAGCGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ugt86Da FBgn0040259 FBtr0082338 2 1 1 120 3R 6983208 6983810 CATGCAGGGAAGAATTGCT 58 6983894 6983912 CACAGATGGTTCCTTCAGC 58 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 3 2 4 170 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6611949 6611968 AATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42489 FBgn0259992 FBtr0300441 3 1 1 60 3R 4479734 4479752 GCTACTGGATGTTTGTGCC 59 4479692 4479715 CCACTGTAGTTCGATATCATTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15864 FBgn0040528 FBtr0300372 3 1 1 261 3R 4075476 4075495 ACTACATGTTGCACTACGAC 58 4075834 4075909 TTCGTGAGCACGTATTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1234 FBgn0037489 FBtr0081599 3 1 1 85 3R 3070868 3070944 AAGGATTGGCAGAGTTTGC 58 3070801 3070819 TTGGTCCTCTAGAATGCGG 59 NA Drosophila melanogaster 61 CG1138 FBgn0037456 FBtr0081703 2 1 1 60 3R 2423191 2423209 ATCCGTCCGAAGATCATCC 59 2423149 2423168 GCTTCTGCAGTATTCATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0078740 3 1 2 169 3R 1448402 1448480 TTAGACTTAACATGCCCGAC 57 1448252 1448271 ATTGAAGTCACTGTTCTGGG 57 NA InUTR Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0299709,FBtr0300525 2 3 3 82 3R 1028995 1029013 TACGCTCAGTGATACAGCA 58 1028866 1028949 ATGGAAGAGCAGGTTCTCG 59 NA Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620,FBtr0300619 2 2 2 60 3L 22980830 22980850 CACCGAAAGAACTTCACTCAG 59 22980872 22980890 GACTTGGACCTTAGAGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ilk FBgn0028427 FBtr0078305 2 1 1 114 3L 21210243 21210675 ACAATTTGGGAGACGACCA 59 21210753 21210771 ATATTGGTGGCGTTCACAC 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 2 4 4 179 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200640 CTTCAACTGATTCTCCAGATACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33285 FBgn0053285 FBtr0078325 1 1 1 60 3L 21081675 21081696 GAAGCTCCAAATAGATCAACTG 57 21081636 21081654 TAGAGACATGGGTGAGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 2 2 2 80 3L 20005285 20005305 GAACTCCAAGATCACGTACTC 58 20005344 20005423 GAAGTTATTGAACCTTGGTCGT 59 NA Drosophila melanogaster 61 Mtr3 FBgn0036916 FBtr0074918 2 1 1 80 3L 19906514 19906590 CCAGAAACACCTTCATCCG 58 19906452 19906473 GAACCTTGGTGTTACCATACTC 58 NA Drosophila melanogaster 61 CG14088 FBgn0036858 FBtr0075016 3 1 1 60 3L 19263408 19263428 CAGTAACGCCAACTTTAATCC 57 19263368 19263386 CAGCAGTTTCATTAGGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586,FBtr0112890,FBtr0075028 3 3 4 280 3L 19153763 19153781 GCGGAATCGAATGAACCAG 59 19139356 19139374 GGATCAGGACCTTCAGTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpS26 FBgn0036774 FBtr0075121 1 1 1 60 3L 18099945 18099963 CTCATGAGGCTACACAACC 57 18100083 18100101 CCCTTAGAAACTGACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7692 FBgn0036714 FBtr0075215 3 1 1 169 3L 17346680 17346699 CTACCAGATTGGTGAACTGG 58 17346830 17346904 GGAAAGCAACTTCTTCTCCT 57 NA Drosophila melanogaster 61 CG9669 FBgn0036667 FBtr0075339 2 1 1 91 3L 16837945 16838021 ATTATGGACGTAATGCAGCG 58 16837873 16837891 AAGAAGGTTCCGATGACCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33796 FBgn0053796 FBtr0091800 1 1 1 107 3L 16162848 16162866 TGTCGATTTCTGCGAAAGC 59 16162699 16162777 GATCATGTCACCTTGCAGC 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0112850,FBtr0301472 3 3 7 80 3L 16070899 16073866 AAGAGCTCAAGCAACTCGA 59 16073907 16073928 TAATTACTCTAATCAACGCGGC 59 NA Drosophila melanogaster 61 stwl FBgn0003459 FBtr0075728 1 1 1 167 3L 14402716 14402734 CTCCGAAGTTGGAGAGTCG 59 14399790 14399808 ATGTTTAGATGGCGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0301405 1 1 3 85 3L 13375926 13376022 TGCATCGTAGTAGCAGCTC 59 13376071 13376089 TAGTGATGATCGGAGCCCT 59 NA Drosophila melanogaster 61 CG6938 FBgn0036235 FBtr0290131 1 1 1 80 3L 11980651 11980669 AACACTTCTGGAGGGAGAG 58 11980710 11980802 CGATCCTTGACAATAAACTGCT 59 NA Drosophila melanogaster 61 CG11588 FBgn0036221 FBtr0076038 2 1 1 60 3L 11915367 11915388 ACAACTACGGAGAATATGATGG 57 11915408 11915427 TACTACTTTCGGTTGGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7616 FBgn0036142 FBtr0076161 1 1 1 80 3L 11164742 11164761 AGCCAGGAATAATTTCGAGC 58 11164804 11164888 TTCAGATTACGCACCACGA 59 NA Drosophila melanogaster 61 nbs FBgn0261530 FBtr0300189 2 1 1 74 3L 9715361 9715380 TACAGTATGTGCCATCGTCC 59 9715234 9715253 TACGTCGACCATTCTGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076653 2 1 2 129 3L 8516564 8516583 CTTTGCCACCAACATTTCAC 58 8516275 8516293 ATAGTAACGCAGGACTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076654 2 1 2 148 3L 8514765 8514844 ATTTGAGAAGCTGCTCAAGTG 59 8514637 8514655 ATGGTGTACCCTTGAAGGC 59 NA Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 2 2 2 103 3L 8418955 8419517 GGTAACAGCACATTGGTTCC 59 8419582 8419601 TCGATAGTGGTCTTTAGGGC 59 NA Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 2 2 2 107 3L 8172115 8172136 CCTGACAGCCATTTACATTAGG 59 8171966 8172048 TGTAGGTAAGTCTGGCTGTC 58 NA Drosophila melanogaster 61 CG10635 FBgn0035603 FBtr0077154 1 1 1 192 3L 5360866 5361009 GTTCCAGAACCACGATGAC 58 5360692 5360710 AACCAGGAACGGTATGTCC 59 NA Drosophila melanogaster 61 Rpd3 FBgn0015805 FBtr0073317 1 1 1 70 3L 4627497 4627517 CTCAACTATGGGCTCTATCGA 59 4627627 4627645 TTGGTCATCTCATCGGCAG 60 NA DesignNoJunction Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 2 1 1 79 3L 4003890 4003910 CTCTTCGGGAAATACATGGAC 58 4003949 4004140 TGATACTGATAGTTCTGCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG16976 FBgn0035366 FBtr0300098 1 1 1 91 3L 2665974 2665992 AAATCCTTGAAGGCTGTCC 57 2665372 2665920 GATATTGTGGGTCTCGATCC 57 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857,FBtr0301465,FBtr0072856 3 3 3 81 3L 1947014 1947092 AGATCACGATGAGGTCCAC 58 1946951 1946969 CATGCTGTCCAAGGTTGTG 59 NA Drosophila melanogaster 61 dlt FBgn0024510 FBtr0072790 2 1 1 140 3L 1793498 1795214 AGATTGCCATCAAAGTGGA 57 1793376 1793396 TCGTCATTTCTGTATCTGACG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9168 FBgn0035216 FBtr0072692 3 1 1 77 3L 1411421 1411439 TATCAGGTGATAGGTCGCA 58 1411529 1411548 ACTCAAGGGTTGTAGTTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Psf1 FBgn0035194 FBtr0072731 2 1 1 60 3L 1247408 1247426 CTACCTATACGAGCGGTGC 59 1247366 1247385 GATAATGGGTCCAAACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42553 FBgn0260755 FBtr0301252 1 1 1 84 3L 835255 835273 CTTTAGTTTCGGCATGGCC 60 835318 835395 ATTGATACCCTGCATCTTAGCT 60 NA Drosophila melanogaster 61 CG34454 FBgn0085483 FBtr0112760 1 1 1 88 3L 232021 232039 ATACAATCCCATTTGCGGC 59 231884 231970 TTTGAATGTCAGCTCCACAG 58 NA Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 1 1 1 154 2R 10178005 10178023 GCTGAATCAGAGATACGGG 57 10177833 10177887 TTTGCCTTTAGTTGGTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 ETH FBgn0028738 FBtr0072426 1 1 1 104 2R 20682871 20682889 GATCACCAAGAACGTACCG 58 20682727 20682803 GTAACAGAGCTGTGCTCAC 58 NA Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 2 2 2 94 2R 19873906 19874868 AATTCCCAGATCGTATACGCT 59 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 thoc5 FBgn0034939 FBtr0072147 1 1 1 80 2R 19843453 19843474 GCCTCTATGGATTCTGAATGTG 59 19843512 19843589 CAGAACTCCATCATCTTGATCG 59 NA Drosophila melanogaster 61 CG30416 FBgn0050416 FBtr0300955 1 1 1 85 2R 19209574 19209671 GATACAAGTTCGACAGATCTCG 58 19209510 19209528 ATGTCAGATTCGGAATGCC 58 NA Drosophila melanogaster 61 CG30192 FBgn0050192 FBtr0071967 2 1 1 95 2R 19026214 19026234 TCAATGACATCGATGAGACTG 58 19026289 19026375 TCATCTGATCTAAATGCTCGC 58 NA Drosophila melanogaster 61 Gr59c FBgn0041235 FBtr0071977 2 1 1 81 2R 18990274 18990292 ACGAACTATTCCGAGTGCT 58 18990148 18990229 AAGTTCTCAAAGGCTGCCT 59 NA Drosophila melanogaster 61 CG13526 FBgn0034774 FBtr0071878 1 1 1 60 2R 18642982 18643002 AGAGTTGTACGATCTCATCCA 58 18643024 18643042 TTTCAAGTCCAGCCTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34202 FBgn0085231 FBtr0112395 1 1 1 102 2R 16640117 16640136 TCTTAACAGTTCTTGCGGTG 58 16640264 16640282 TACTCCTGTCGAGTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 1 2 2 77 2R 16150046 16150124 ATTCAGCTACAGGCCATGG 59 16149987 16150005 AAACTTGTCGAAGCCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11099 FBgn0034485 FBtr0086315 2 1 1 117 2R 16124368 16124388 GACGTATCCAACAATGAGCTC 59 16124467 16124543 AACCACTTAGCTCCACTGG 59 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086538,FBtr0086539 2 2 4 182 2R 15338967 15338986 AATCGTTCACATCCAAGCTG 59 15335987 15336005 CTGTGTAATGACCCTTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 3 2 2 86 2R 14058154 14058232 TGGAAATAAGGGTTGCCGT 59 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 1 1 1 78 2R 13939208 13939226 TCTGACTGAGTGCGATACC 58 13938861 13939166 CTTGTAGCTGTCGGAGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18432 FBgn0034238 FBtr0086943 3 1 1 82 2R 13428253 13428274 ATCTCCAGATATCCATCAACGA 58 13428315 13428393 CTCGTAGAGCCATATGTTGAG 58 NA Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087025 1 1 2 138 2R 12669058 12669682 GACTACGATAACGATATTGTGGAG 59 12669779 12669797 CATCGGCACCAAGATTCTG 59 NA Drosophila melanogaster 61 CheB53a FBgn0261292 FBtr0091520 1 1 1 80 2R 12354636 12354654 TACACAGATTGGTCCTCCC 58 12354698 12354772 AAGGAATAGTGTACCGGGC 59 NA Drosophila melanogaster 61 SP2353 FBgn0034070 FBtr0087209 3 1 1 80 2R 11929886 11929905 TCATCTACCGTCATCGATGG 59 11929945 11930023 AGAACAATCCATTCGATCTTCC 58 NA Drosophila melanogaster 61 Rrp42 FBgn0034065 FBtr0087206 1 1 1 80 2R 11903001 11903075 AGACATCCTGATTCTGGAGTG 59 11903117 11903135 TTTGTGTTGAACAGAGCCG 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114494 1 2 5 117 2R 9847775 9847794 TGGGAATTGACGATTCACTG 58 9847559 9847577 CTGGAACTACCCAGTCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6553 FBgn0033880 FBtr0087642 1 1 1 80 2R 9742420 9742497 AGTTTCCTTACTGTGAAACACC 58 9742361 9742381 CCAATACCACGATTAGGAAGC 58 NA Drosophila melanogaster 61 CG8860 FBgn0033691 FBtr0088011 1 1 1 159 2R 8067270 8067288 TTGTCAAATTCGCCGAACC 59 8067129 8067147 ATCAGCTTGACGAAGAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 jeb FBgn0086677 FBtr0088021 1 1 1 86 2R 7980401 8004111 ACAAATCGAGTGTCCTACCG 59 7980334 7980352 TCTATGCAGCGGTATCTGC 59 NA Drosophila melanogaster 61 CG13186 FBgn0033680 FBtr0087981 3 1 1 60 2R 7969125 7969143 TCGGGATAAGTTCCCACTG 58 7969164 7969185 CTTGAGTATCCTGTTCACATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or47b FBgn0026385 FBtr0088166 2 1 1 80 2R 7207813 7207883 CCAGCACATTATCAAATTGGTG 58 7207754 7207775 GAGAAACTGGCCATTAATTGTG 58 NA Drosophila melanogaster 61 BBS4 FBgn0033578 FBtr0088202 1 1 1 80 2R 7025183 7025928 CATCGCATCTGAACAATACG 57 7025971 7025989 TAGCACTCGGCATTATCCT 58 NA Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 3 2 2 86 2R 5763387 5763408 AAACGATTATAAGCTGGATCCC 58 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562,FBtr0088561 1 3 3 80 2R 4967860 4967881 TTTATGTACTGCTGCATCTGTG 59 4967919 4967993 ACTCATAGTTGGTTATGTCGTG 58 NA Drosophila melanogaster 61 CG8248 FBgn0033347 FBtr0088678 2 1 1 88 2R 4807088 4807108 CCATTATTTACCTGTTCGCCC 59 4806963 4807040 TTTGTTCTGCGACTTGTAGTG 59 NA Drosophila melanogaster 61 CG30354 FBgn0050354 FBtr0088702 3 1 1 90 2R 4564768 4564844 ATTTCGAACCTAAGGAATGGC 58 4564895 4564914 TTGCGGATCAACTAACTCCT 59 NA InUTR Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917,FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 1 6 6 91 2R 3526397 3527216 CGGTGCTAAATAAGATTGTGGA 58 3527268 3527286 ATTCTCGTCAATGTGGCGA 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 2 2 3 148 2R 3472856 3474449 AAGACCGAAATCGCAAACTG 59 3472727 3472745 CCGAACGCTTGATTTCTCG 59 NA InUTR Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 1 3 3 80 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922201 TAGAATCTTATGCGGTCGC 57 NA Drosophila melanogaster 61 Trap1 FBgn0026761 FBtr0086149 2 1 1 163 2R 2521450 2521530 GGAGATCAACCCAAAGCAC 58 2521305 2521323 GCAGAGTGTTCATGTTGGT 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-525c FBgn0083036 FBtr0113542 3 1 1 67 2L 20418859 20418881 GATCTTCCTGTAACTTGTGTCTC 59 20418907 20418926 TTATTCAGGATGCCGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111256 3 1 4 128 2L 22431004 22432689 CTTTATACTCGCCAAGGTACC 58 22432776 22432797 GGTATACTTGGTTTCCTTTCCA 58 NA InUTR Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 3 5 5 91 2L 21185984 21186086 ATCGTCAGTTGTCAACTGC 58 21185911 21185929 ACAATGGTCAGATCCCGAG 59 NA Drosophila melanogaster 61 CG31677 FBgn0051677 FBtr0081407 3 1 1 60 2L 20604078 20604097 CAAATTAACGCTCGAGATGG 57 20604037 20604058 TCAATATTCTATTCTGGCCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp36DE FBgn0011559 FBtr0081054 1 1 1 80 2L 18358858 18358880 CGATATTTGGAGTAAACCCACAG 59 18358741 18358818 TCACTTGTGAAGACTCGGG 59 NA Drosophila melanogaster 61 Ugt36Bb FBgn0040261 FBtr0080910 2 1 1 147 2L 16797191 16797209 AAAGACCATGGACTTTGGC 58 16797373 16797397 CATCTCATGATAGTTTGGAAACTCC 60 NA DesignNoJunction Drosophila melanogaster 61 yellow-b FBgn0032601 FBtr0080894 1 1 1 95 2L 16755954 16756980 GATCTTAATGATACCTCCAGCA 57 16757036 16757054 AGAAACCAATTCCGGTTCG 58 NA Drosophila melanogaster 61 CG18477 FBgn0028864 FBtr0080756 1 1 1 80 2L 15661259 15661512 CCCAAGAACCTAATAATCAAGGAG 59 15661551 15661569 CGAGTTGACAAATCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 CG18636 FBgn0032551 FBtr0080688 3 1 1 87 2L 14783923 14783997 GTACAGAGACAACATCAGGC 58 14783855 14783873 AGTAGCAGTGAGCAAATCG 58 NA Drosophila melanogaster 61 CG9306 FBgn0032511 FBtr0080472 1 1 1 173 2L 13370846 13370864 TTAGAGTCGTGGTACGACC 58 13370554 13370631 ACTGTTGGCAAAGTTTCGG 59 NA Drosophila melanogaster 61 CG16824 FBgn0040973 FBtr0113336 1 1 1 68 2L 13293224 13293242 AGAAGGGACCTCTTCTTGG 58 13293274 13293292 ATGAAGGTGTGGCAATGGA 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 pie FBgn0005683 FBtr0080046 1 1 1 60 2L 10422556 10422575 CGAATGGATGATTGTACGCA 58 10422448 10422533 ATGCGTTGAGAGTAGCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cdk5alpha FBgn0027491 FBtr0080063 1 1 1 130 2L 10309474 10309492 GTCGAACCACAACAAGCTG 59 10308941 10309380 AAGTGGAGGCCTGAATGAC 59 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079949 2 1 2 167 2L 10222694 10223150 TCAATGCCGACAAGATGAC 58 10223281 10223299 CCAGGGTAATCATGCAGTG 58 NA InUTR Drosophila melanogaster 61 mts FBgn0004177 FBtr0079525 2 1 1 60 2L 7828106 7828126 GAATGCAATCAGTTGACAGAG 57 7828148 7830474 GAATCTCCTTGGCCTTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 2 1 1 139 2L 6960471 6960548 TTGCACTTACAGCAAAGCG 59 6960650 6960669 CAATTGGTTGATCAGCTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 2 1 1 108 2L 6745248 6745266 AGTTCAGAGCAGAGCTGTC 59 6745103 6745176 TGTTGTTTGAAGCTCGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 3 1 1 88 2L 4827096 4827186 ATGGGCTATGGAATCCGTC 59 4827237 4827256 TTACCAGGACGTATCACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34177 FBgn0085206 FBtr0112368 3 1 1 84 2L 4433987 4434006 GCTATGCTCCTATGGATCCT 58 4434053 4434129 ACTTACCAGGATGGTTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG9663 FBgn0031516 FBtr0077604 1 1 1 80 2L 3297496 3297515 ACTTAGTGCCGTTATTGGAC 58 3297377 3297456 AAGCCATATGTTGTGTATCCTG 58 NA Drosophila melanogaster 61 ast FBgn0015905 FBtr0077952 2 1 1 85 2L 1078495 1078513 CAGTGCTCTCCTACGACTC 59 1078559 1078636 CTTGGTGAGAACCTTAACAGTC 59 NA Drosophila melanogaster 61 CG4375 FBgn0031295 FBtr0077997 3 1 1 60 2L 1026499 1026518 GAGGAGAGCAGTGATGAGTC 59 1026458 1026476 ATGGTTTGGTACGCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13690 FBgn0031252 FBtr0078090 1 1 1 60 2L 418849 418869 CTTGGTCATTAAGGACAACGA 58 418809 418828 TCTTCTTGTGACCGGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 1 2 6 96 2L 15705 17064 GCTTATCGTAAGACGGCAC 58 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 3 3 10 97 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111112 112704 TCCAAACATGATACCCTGGTC 59 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 3 3 3 83 2L 215084 215105 AGTGATCAATAAACAGACAGGC 58 214931 215040 TTCTCCGTAAGCCATTGCA 59 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 3 3 3 61 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 3 2 2 70 2L 2226060 2226078 TGATTCTCATGATGCAGCA 57 2225951 2225969 CCCATGACCCTTAATGACC 57 NA DesignNoJunction Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692 2 1 2 131 2L 2837356 2837374 GATTGGTTCCTCAAGGCAG 58 2836170 2837204 ATGCAGAAGCACATTGTATCG 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 2 5 6 81 2L 3071760 3080664 TCATGTCCAAAGAGCTGGA 58 3071697 3071715 GTCTTCTCTAGCGTTCCCT 58 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 2 1 1 119 2L 3388408 3388428 AGTACTCCTGCTGAATAAGAC 57 3388247 3388267 TCGATATTTAACTCCGCAGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 3 1 1 116 2L 3468974 3468996 GGTTGATTATTGACGAGATCTCC 59 3468828 3468846 ACAGGATGAGCTGTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 3 2 2 84 2L 3473693 3473776 AACTACAATTGGCTGCCTC 58 3473822 3473842 GCGAAATAGTATCCACCATGG 59 NA Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 3 1 1 99 2L 3509822 3509844 GGTTCTATTATATCCGAGGAGTG 57 3509678 3509696 CAAATTCGCTGGTTCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 2 5 11 179 2L 3626211 3626349 GAAGCAGAGAAGGATGGAC 57 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 3 8 9 86 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 1 5 6 90 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 2 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343806 4343825 AGTAGAAGGCCTTCAAGGAG 58 NA Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 2 2 2 83 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872353 4872513 CAGAAATTGTCGTTCCCGG 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 3 3 3 106 2L 5947158 5947244 GGTCTGGAGGACAAATTCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 2 4 4 93 2L 5973670 5976624 GAAGACAACACAAGCCGTG 59 5973595 5973619 CAGATAATCTCCAAGTTTCTCTACC 59 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 1 4 4 92 2L 5976671 5976690 CATTTACCTTTCCGGCACAG 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 1 2 2 88 2L 6024380 6024453 GGAGGGCTATGTAGTGGTG 59 6024310 6024328 TCAGACGGATGAAGTGCTC 59 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 1 3 3 83 2L 6325528 6325546 GAGGAGATTGACCTCTCCG 59 6325590 6325721 GGTAAGACTATCCATGCTCTCC 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 3 2 2 250 2L 6528793 6528811 CTTCAACGAGATCGAGGAG 57 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 2 5 5 132 2L 6924279 6924299 TGGTTATCATGTACGACCAGG 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112611 1 1 3 80 2L 7155538 7155556 CCAGAAAGAACTACTGGCG 58 7118913 7155495 GCAGCACTTACCTCATTCTC 58 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028 3 1 2 98 2L 7182810 7182828 GAAGATAGCGAGGACGAGG 59 7182888 7183511 CTCAATTATCTTCCTCTCGCG 58 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 1 3 3 70 2L 8450794 8450812 GAGACTATCGAAATGCGCT 57 8450677 8450695 CATTGTTATGCCCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 3 3 3 71 2L 8450795 8450813 CGAGACTATCGAAATGCGC 59 8450677 8450695 CATTGTTATGCCCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 3 4 5 84 2L 9535897 9536002 CTATATCGATCACTCCCGGC 59 9536049 9536067 ACCACCAGCAGAATGACTC 59 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 1 2 3 90 2L 9553927 9554007 TTCTGATGAACCTCAAGATGC 58 9553857 9553875 ATGGTGGATCTTATGCTGC 57 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 1 3 3 80 2L 9911765 9912137 CTTTGACACAATGGCCATCC 59 9911704 9911723 TTCTCCCTTAGGTATCGCAC 59 NA Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 2 2 2 88 2L 10011894 10012403 GGATTCCAAAGCTGGAACG 59 10012449 10012473 GGACTTCACTTGAACTGATTATCTC 59 NA Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0080136,FBtr0290229 2 2 2 62 2L 10771182 10771200 CAACCAGCGCATCAATCTC 59 10771225 10771244 TTGTTTATCACCTCGGAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 2 1 1 60 2L 10860879 10860897 CTATCAGAACGGACATGCC 58 10860987 10861005 AGTGGGTTGAGTCAAATGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 2 2 5 171 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278897 11278918 GCTGTGACTTGAATACTTGAGG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 3 2 8 91 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458197 12458217 TATCATGAGATGCGACTTGAC 58 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0110941 2 1 3 97 2L 13785724 13785803 CAAATAAGCGTAAGAATCGCGA 59 13785861 13785879 GACGAGAACCACGTAGACC 59 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 1 2 4 96 2L 14639762 14688476 AATGCAATAGGCGAACCTC 58 14636101 14636119 CTAAAGTCCCAATCTGGCG 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 1 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0080922 1 1 2 79 2L 16870940 16870961 GGAAGAAGTGAAAGAAGGAGTG 59 16877498 16877518 GTTTCCTTTAGGATGTCAGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 1 3 4 80 2L 17417623 17417641 GCTGAAACTAGTGAGACCC 57 17415379 17417580 GTTAGGAGTTCTGGATTCGG 57 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 1 3 4 80 2L 17417623 17417641 GCTGAAACTAGTGAGACCC 57 17415379 17417580 GTTAGGAGTTCTGGATTCGG 57 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012 2 1 2 90 2L 17810926 17812077 GCGAGAATCGACGAATATTCG 59 17810856 17810874 CACGTAAATGACACCGGTG 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 3 5 5 150 2L 18320722 18383413 TCTTAACAGATGCACTCACCT 59 18383525 18383543 TTGAGTACCTTCTGCTCGC 59 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 2 3 3 106 2L 18963249 18963267 AATCCGTTCGAAGAGGAGC 59 18963106 18963179 GCTGTGATGCTTCCTTGAC 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231 3 1 4 125 2L 19183327 19183395 AATCGTAAATCATGTGCTGC 57 19183221 19183241 TAAATGAGCACTGGATGTAGG 57 NA InUTR Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 1 2 3 119 2L 19385700 19386089 GAGATTTCCAACAAAGTTTGGG 58 19385296 19385314 TATAACCTCCACCGTAGCC 58 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 3 2 2 68 2L 19418377 19418396 CTACGACAAGTACACCACAC 58 19418489 19418507 AAGGGAGTCATGTCAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 3 2 2 100 2L 19506353 19507500 CAGCACTGGAGGTATTTCGA 59 19506272 19506290 TGATGATCTCCGTTGCCAG 59 NA Drosophila melanogaster 61 CG17472 FBgn0032868 FBtr0081382 3 1 1 61 2L 20634581 20634601 TCTTAGTATTGGCGAATCTGG 57 20634692 20634713 CCTTTCGTGTTCATCATATTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 1 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 2 2 2 91 2L 20930077 20930153 CCTTAGAAGAGGTGCACCT 58 20930004 20930023 TACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 2 1 1 61 2L 21164665 21164683 GGCCTTTCTCTGCATTCTG 58 21164766 21164785 GAACGTGATTCAGCATGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 3 5 5 91 2L 21185984 21186086 ATCGTCAGTTGTCAACTGC 58 21185911 21185929 ACAATGGTCAGATCCCGAG 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 3 5 5 91 2L 21185984 21186086 ATCGTCAGTTGTCAACTGC 58 21185911 21185929 ACAATGGTCAGATCCCGAG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 1 5 5 82 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666303 21666321 GAAGCATTTCGTTGGAGGC 59 NA Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999 1 1 2 80 2L 21775433 21795253 ATCCACAGATAACCATGAACGA 59 21775374 21775394 AGAGTCCAAGTATAGTTGCGT 59 NA InUTR Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 2 2 2 132 2L 22240054 22240072 TATAGTCGTTGCCTCTGGA 57 22240218 22240236 AAGTGGAATAGTAGGCCCG 58 NA DesignNoJunction Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 3 3 3 149 2L 22427789 22428360 CGTGCTGATGATCTTGAGG 58 22427658 22427676 CTTAGTCTTCCGTTGCTCG 58 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0086030 1 1 3 95 2R 1867139 1867449 CTGTGACCAATTTGATTTGAGC 58 1867065 1867083 TTGTTTGAACCCGACTCAC 58 NA InUTR Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 3 2 2 81 2R 2558899 2559028 TGGACAAGTTCTACTGGTACG 59 2558838 2558859 CCCAGCAGTGAATAGATAAAGC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 3 3 59 86 2R 3247004 3247023 AAGCACCTTAAGGGAAAGAG 57 3236471 3246958 CTTGTACCATCTAAAGAAAGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 3 3 59 82 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241373 3241393 CCATGGACTCCACAATATTGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 3 2 59 108 2R 3245210 3249231 TCATCACAGAACCCGTAGG 58 3245120 3245138 TGAGCTGGACAGATGAGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 3 2 59 102 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236468 3243201 GAACTTGTACCATCTATAGAAGGG 58 NA Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 2 2 2 106 2R 3348839 3348858 GTGGGAATCGTTGAGATTGG 59 3348697 3348772 AGACCATTGTTCTCCATTTGG 58 NA Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 2 2 2 60 2R 3679896 3679914 TCCGTTGTGGATCTTACCG 59 3679854 3679875 TAGCCTTGATTTCGTCATAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112580 3 1 4 133 2R 3742126 3742144 TTTGTGTCCTTCCTCAAGC 58 3741853 3742029 ATGTTTGGTATGGAGCCCT 58 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 1 3 3 80 2R 3858089 3858108 AACAAGTGGCTACATATGGG 57 3857971 3858049 GTAGATGACCATATGCGTATCC 58 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668 2 1 2 92 2R 4014490 4014509 CATTAGTCTGCTCACCTCAG 57 4014363 4014435 AACCGAAAGGCTTTGAGTC 58 NA Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 2 2 2 60 2R 4126449 4126470 GGTGCATCTATTTAAGAAGCAG 57 4126488 4126509 GTAGATCTTGATCTTGTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 3 1 1 62 2R 4337511 4337533 GACGATGTGATCATCTATTCACG 59 4337409 4337433 GTTGAGAACGATTACATAGAGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 2 4 9 149 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564107 4565947 GCACGATCTTTGCCTTCAC 59 NA Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 3 2 2 82 2R 5002674 5002749 AGGACGAATTACTTGTTCGAG 58 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 3 5 5 80 2R 5066384 5066405 AGGAAGATCTAGACTCCAAGGT 59 5066245 5066343 CCTGGTCGCATTTATTGGC 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611 1 2 3 112 2R 5076715 5078788 ATTCGCAGTTAACGATGGC 59 5076621 5076639 TGACGCCTTTGTAGAGTCC 59 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 1 2 2 80 2R 5320558 5320644 ATCTATCTAAAGGCTCTGTCCG 59 5320685 5320703 GGCGCGATAGAACTTTGAG 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 1 4 5 82 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949138 TTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405 1 1 2 97 2R 5970822 5970917 GTCCGCAAAGGTGAATCTC 58 5970978 5970996 ATACTTCCTTGGTGACGCC 59 NA Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 2 2 2 60 2R 6044820 6044839 CAGACTGTCCCATCAAATCG 58 6044779 6044799 GGGAAGTATCTATGTGTCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0112799 2 1 4 80 2R 6097602 6124512 ACCATCAGAGCTCAAATTGAG 58 6097542 6097560 GGTGATCACTCCGTAATGC 58 NA Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 3 2 2 80 2R 6146890 6146909 GGATATGGATACGACAACCG 58 6146951 6147034 ATCGTAGTAGCGATCTCTGG 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 1 2 4 83 2R 6358246 6358955 GTATCGGACGGATATGACGA 59 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089347,FBtr0089357 2 2 26 199 2R 6419772 6419791 CACGATGAGAATGTTGAGGA 57 6371745 6419549 TTCCTGCTCAAATCTTGGG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089361 1 1 26 94 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6380076 6419549 GGATCGGATAGATGTCTTGGG 59 NA Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 1 2 2 80 2R 6706100 6706120 AAATGGTCACAATCAGAGCTC 58 6705985 6706063 GGAGTATCTCCATAATTATTCCGG 58 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 3 2 4 82 2R 6731013 6735972 TCCATTGTACTCAAGGCGG 59 6730949 6730967 AGACCCAAATCCTCGTCAG 59 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 3 4 4 273 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394165 GTTGAACTCGTGCTTCAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 2 3 3 123 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855268 7855344 CACTTGGAATGAAGGATCCG 58 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 1 3 3 60 2R 8212164 8212187 GTATTCATACTGTTGCTCCTATCG 59 8212057 8212076 ATGCTTTGTTAAGCCGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 2 2 2 80 2R 8373035 8373056 GACTGGATATTCAAGGTACCTG 58 8373096 8373181 GATGAGTACCCACATGATGC 58 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087889 3 1 4 148 2R 8466749 8466767 AGTATGTAGAGCGGTTGGC 59 8466042 8466637 AGCCTTGGTATTGACCTCG 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 1 2 4 88 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464425 8464443 TTTGATCTCCGCTTGTTGC 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 3 4 4 136 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 1 3 6 80 2R 8766206 8766566 CAATACCAAGATCCCAACCA 57 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 3 4 6 143 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151379 9151398 TGTTCTCAATGGTGTTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 2 12 12 86 2R 9306902 9306986 GGCAACCTCGTTTATACTTACG 59 9306837 9306855 CAGATGGGTAAGCCAGGTC 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 1 5 5 81 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 1 3 3 137 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 1 2 2 80 2R 10498984 10499138 ACAAGTTAAACCAGCTCGAC 58 10498923 10498941 TCTGACTCCGTCTTTGAGC 59 NA Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112517 3 1 2 107 2R 11346762 11352870 TAGTAGCTCAGCACCATCG 59 11352941 11352959 GACTTCTCCATCTCGTCCG 59 NA Nonspecific Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 3 5 7 95 2R 11551928 11552826 TGGAATTTGCTCCATAGACGA 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 2 2 2 139 2R 11575747 11575765 GAGTTCGAGCACTTCACTG 58 11575562 11575580 CATACTCCTAGTTGGGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 3 4 4 81 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747610 11747703 CTGCTCTAGATCTAGGCCC 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 2 8 13 84 2R 11837967 11838677 ATCTGGTACAAGGCGTGTC 59 11837901 11837919 TGATGTAGAGCGTCGACTG 59 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 1 2 5 80 2R 12020076 12020098 GGACCTTCCTTCATCTATCTAGG 59 12020137 12020942 GAAGTTGAACGCAACATCGT 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 3 5 5 83 2R 12093319 12093421 GTGAAGTGAAGAAGGCATATCG 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 3 3 3 80 2R 12454486 12455297 GAATTGGAGAAGATCCAGCT 57 12455339 12455358 CAGTAGAATCTTCCCGAACC 57 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087098 2 1 3 81 2R 12457021 12457367 TTGAATCGTCTAGAGCTTCG 57 12457409 12457429 AGGCACTGTCTTTAACTTGAG 58 NA Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 2 1 1 61 2R 12943886 12943907 GAAGGCTCAGAAGATAACTCAG 58 12943782 12943803 CTCTGTTTCCCTATTTGTTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336 2 1 2 81 2R 12991127 12991145 CATTAGCGCAGATCAGTCC 58 12991188 12993118 CGTAGAACGATAGTTTCTGGG 58 NA Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 1 1 1 73 2R 13306950 13306968 CTACATCAACATCGCCGAG 58 13306732 13306752 CCTTCATAGACTCATCCAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 3 2 2 80 2R 13320625 13320704 TCCGAAGAGATCTAGAACCA 57 13320564 13320583 CCATTGGACGATGTAGACTC 57 NA Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 3 2 2 155 2R 13394199 13394218 GAATCCGATTTCGATTCCCA 58 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 3 2 8 82 2R 13408429 13411602 CTCGAATCTAACCGGTCCT 58 13408365 13408384 AGTATTCAACGGCATTCAGG 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 1 5 5 80 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042924 14042942 TAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 3 1 1 179 2R 14049220 14049238 GAAGCAGGACCTAGAGGAG 58 14049457 14049475 AGATCCTCCGATCGTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711 1 1 2 86 2R 14512327 14512345 ACGCTCCATTACTGGACAC 59 14511624 14512278 AAAGAGGGACTGTTGTAGGC 59 NA Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970 3 1 2 109 2R 14656382 14656401 TGTAGTCCACCGGAATTGAG 59 14656750 14656952 TCACTCAGTCCATTCTTGTCC 59 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0089970 2 1 2 101 2R 14744461 14744479 CTTCATCCCTCTCCTGACC 58 14744186 14744396 TTTGAAGAGCCCTGAGACC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 3 5 5 96 2R 14843623 14843771 CATCGTGAGACTCGTTCAC 58 14843831 14843849 TATCCTGTCGATCTCCACG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 2 2 19 86 2R 15359174 15359192 GTTTGAGGAGGACGAACTC 57 15359241 15360333 ACTAGAGCTTCCGTCTTACC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 1 5 19 96 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 1 2 2 65 2R 16151894 16151912 ATGTCGATCTTACCAAGCG 57 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 2 3 5 87 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212014 TTGTTTAGGGAGCTAGCCA 58 NA Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 3 1 1 208 2R 16947835 16947854 CGCAGAGTACTACAAACTGG 58 16947589 16947607 CTCTATCCGGCTGATTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 2 3 3 80 2R 17172235 17172255 TATCTATCAGATGTGAGCGGA 58 17172297 17172371 ATACATCAGCAGAATGGGC 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 3 4 5 180 2R 17202255 17202336 CCGGTATCTGGAAAGACCC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 1 2 4 84 2R 17222089 17224945 AGTAATCAGGTCTGGATATCGC 59 17225051 17225069 CGTTATCGTTGTCTTGCGG 59 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951 1 1 2 81 2R 17423794 17423817 CTATTCCAGAACCAATAGGATCCA 59 17423673 17423760 GGGCTTAATGTGAACTTTATACTCC 60 NA Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071691 3 1 2 138 2R 17494083 17494101 ATCCCAATGACCGACAGTG 59 17493856 17493982 TTTGATCGGAGTTCGTAGCA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 3 2 2 84 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361779 18361797 CGTACACTTTGGGCATCTG 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 2 8 13 141 2R 18813126 18814633 GGCTTATAATATTGTTCTGCGG 57 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 2 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 81 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484835 19484916 CGAGTACATGCCTTCATGC 59 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 3 2 2 209 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044667 20044685 TGGGATGTTCACAGGAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 2 2 3 112 2R 20090333 20093342 TTGGATCGTAGCATCTTGC 58 20090079 20090097 TCGTACTGCTGGAATTTGC 58 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 2 4 4 60 2R 20420050 20420125 CGCCTCATCAACTTCATACG 59 20420147 20420166 CATCGTAACACTCGTTGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 3 3 3 80 2R 20721182 20721203 CACCCTCACATTATCTACCTCC 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 1 3 3 85 2R 20853554 20853636 TAGCCGATATGTTCGACGA 58 20853487 20853505 GTCGATCATGTTCAGCTCG 58 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375 2 1 3 162 2R 20853666 20854678 AACGATATGGAACCAGAGTC 57 20853459 20853477 TTTCCCAAACTTGATCCCG 58 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 2 2 3 81 3L 147874 147949 GTATATGAAGCTTACTAGCTTGCG 59 147989 148007 GGTTGTGGCCATGAAACAG 59 NA Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 1 2 2 94 3L 219778 219796 TGATATTGCTCGTCTGGCT 58 219635 219720 GTTAACGGCCACCTTTGTG 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0072565,FBtr0112807,FBtr0110818 3 3 4 80 3L 436272 436292 CAGGAGTTCCATAAGCATCTG 58 436150 436230 CGTGTTGATTCTGGCATCC 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 1 4 6 80 3L 982230 982248 TGCATCTCTATGGTCTGGG 58 982289 983867 AGTCGATCATTTCCTTGATCAG 58 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 1 2 2 139 3L 1312656 1312733 AGTTTGGGTGATAGGGCAC 59 1312535 1312554 CGTATTTCTCGATGAAGGCG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 1 2 3 81 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573752 1574002 AGGTTACTTCTGAGCTGTACTG 59 NA Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 3 3 3 103 3L 1621163 1621182 CTTGTTCAAAGGAGCTGTGG 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 2 2 2 80 3L 1834921 1834940 TTCGTTATCCTTTCGTTGGC 59 1834675 1834882 TGGATGATCATAGTAATCCAGGG 59 NA Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 3 1 1 60 3L 2475181 2475202 CTTTCAATGTCATGCCAATGTG 59 2475079 2475097 ACCCGAGATGCTGTATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 3 2 2 85 3L 2659737 2659815 TCTTAACCATAGGTTATGGGC 57 2659862 2659880 CATGGACTCAGTTACGGAG 57 NA Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 3 2 2 107 3L 2661989 2662007 TGATTACGTCAACCGTTGC 58 2662078 2662163 ACGCAGCAATAAAGAAGCC 59 NA Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 1 3 3 82 3L 2724738 2728436 GGACAAGAATAAGGAATCGCTC 59 2724677 2724695 ATGGTATGATGCCCTGCTC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0273252 1 1 3 99 3L 3153389 3153407 CAATGTGCACTCGATGACG 59 3153468 3153542 AATCGTATTGTTGATGGTGCC 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0273252 2 1 3 120 3L 3153368 3153386 TCGATACATGGATTCGCCC 59 3153468 3153542 AATCGTATTGTTGATGGTGCC 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 3 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 3 6 13 178 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593476 3593494 AAGACCTCGGATTTGGGTC 59 NA Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 1 1 1 73 3L 4003934 4003952 GGAGGAACCCTACATGACG 59 4004160 4004178 AATTTGTGGCAGCTAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 3 3 6 97 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095861 4095980 GACTGGTAGTATTCCTTCATCGA 59 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 2 3 3 94 3L 5338822 5338840 CTTATCCGGATTGGGTGCA 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 1 4 4 80 3L 5921670 5921689 ACTTCAATTCCAAGAATGCG 57 5921731 5921813 TGGTTTGGATCTTGTACGTC 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926 1 1 2 81 3L 7118472 7118490 TCACAAGGGCGAGATAGTC 58 7118292 7118427 GACGTTTAGCACCTTGCTG 59 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691,FBtr0299693 3 3 3 140 3L 7322409 7322427 ATCGATTTGCCTATGCCCT 59 7322596 7322614 AGAGTCCTTTCCTATCGCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 2 4 5 228 3L 7361074 7361998 AATAAGGAGGTGAAGAAGCG 57 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 1 4 5 60 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7361034 7361052 GATGTTCTTGCTGTCCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 3 3 3 88 3L 7558075 7558155 CTAGCTGCCTCGATATCGA 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 2 11 15 80 3L 7693413 7693497 ACTGTACAAGGAAGTCATCCA 58 7693353 7693374 TTAGCTTCGAATGGTTCTACCT 59 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 3 2 2 154 3L 7772024 7772043 AAAGCCTGAGTACAGAGCAG 59 7771828 7771909 AATGTCCACCTTTAGTTGCTG 58 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 3 3 3 80 3L 8269588 8269930 AAACAATGGAGGACGTTCC 58 8269971 8269992 AGGTGATATAGATCGAAGTGGA 58 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 3 3 3 83 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607901 8607977 CTCCACAGTCCATCATTGC 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 2 5 5 80 3L 8780759 8780777 GGTCTGATTTCGAAAGCCA 58 8780818 8782057 CTGATCGACACTAGAAGATCTG 58 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 2 3 4 111 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942279 8942297 CAGTTCCTGACGATGTAGG 57 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 1 2 4 106 3L 8960522 8960540 TGAAGAACATCTCGGGCAG 59 8960605 8960677 GTAGGATTCAGAGTTCTTTGACTC 59 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 2 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964099 8964119 GACAAGTTCCTGAATTTGCGA 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 2 5 5 82 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986077 8986096 TGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 1 3 6 84 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 2 3 3 108 3L 9581445 9581463 ATATCCTCATCGGAGCTGC 59 9581535 9584349 CCAAGTGCTCTTTCTTGGG 58 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435 2 2 3 86 3L 9636634 9653749 CGATAAAGAGGATGACAAGGTG 59 9636569 9636587 AGTTGTTTCGACAGGAAGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 3 4 12 115 3L 9774994 9775719 CTACCTGGGTAATTTGTCTGG 58 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 2 2 2 81 3L 10090895 10090913 ACCAGGAGGATGCTTTCAG 59 10090283 10090854 AGAGATAAAGATGAGACCAGCTG 59 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 2 3 3 87 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188019 10188039 GATGTCATCGCCGATAATGTC 59 NA Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 1 2 2 109 3L 10618183 10618201 GGTCTTCGATGTCTTCCTC 57 10618031 10618110 ACTCAATTGCCATGGTCAG 58 NA Nonspecific Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 1 2 3 118 3L 10681693 10681792 TAGAGCTTTGGGACAAGGA 57 10681874 10682037 TATTGTTGAAGGCTGCCAC 58 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 2 4 4 115 3L 10865273 10865291 ATCAGCACAGTCCAGTTCC 59 10865369 10865455 CATTTCTTCGCTGTTGTCCA 59 NA Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 2 1 1 98 3L 11114486 11114506 GCTTTATTCCTAGGATTCCGG 58 11114722 11114740 GGTTCTTCTCCAGACAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347 3 1 3 167 3L 11167856 11167989 AAGTTCGAACGGATCTGGA 58 11168120 11168200 ATTGAGGAACCGCATAGCT 59 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 3 2 2 80 3L 11999277 11999598 GAACTTTGAACAGATGCTCTC 57 11999640 11999658 ATGGCTACATTTCCAAGCA 57 NA Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 3 2 2 141 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458137 12458155 CGTTCTCGTATCTCCCAGG 59 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948 2 1 2 137 3L 12765676 12766386 TTCTACCACCTGAACGTCAG 59 12765558 12765576 CCGGGAGATGATCATCCAG 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 2 2 2 145 3L 12776712 12776731 CGTGTAACTGCAAGAAACCA 59 12776893 12776911 TACTGGTGGAGGATTCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 2 2 2 90 3L 13501638 13502161 TCCCATTGCTCAAATAGTCG 58 13502214 13502232 GGCGATACCTATACCACCA 58 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 1 4 4 99 3L 13884420 13884438 AGCTACCACTACAGCAACG 59 13884044 13884357 CCCGATAAATCTGGTGGGT 59 NA Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 2 2 2 60 3L 14045080 14045100 CCATGACATTCGTGATACGTC 59 14045118 14045140 GTGGGTATTAGAGATGAGTTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075775 2 1 3 135 3L 14058247 14058697 AGGAGTCATCGGCTTTATCTC 59 14058794 14058812 GGAACTCCTTCACCCACTC 59 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 2 3 3 80 3L 14620526 14620544 GCTATGTGACCTTTGGAGC 58 14620588 14620666 GCCATGGAGTCAAATCACC 58 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 3 3 10 194 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923955 16923974 GGGTTGATAGGCTCCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 3 2 7 116 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953720 16953739 CACATCTTCGTTAGCACGAC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 2 2 7 115 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953720 16953738 ACATCTTCGTTAGCACGAC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075004 3 1 12 80 3L 19301390 19301410 AATGTCACTTTGACAGTGCTC 59 19301268 19301353 GATATTGGGTTCATAGTACAGCTC 59 NA Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 1 2 2 80 3L 19799486 19799506 TCAAGTGAACAGTGAAAGCAC 59 19799548 19799623 CGTATGCTTTCTTGCCTGG 59 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 2 2 2 84 3L 20221373 20221391 GTTTCACGATCTCCATGCC 59 20221438 20221529 GAGGTACACATCGCTAGGTC 59 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 2 2 2 148 3L 20432114 20432190 CTACCATCAAGACGTACGG 57 20431984 20432004 CACGTGATCAATGAAGTTCAG 57 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 1 2 4 80 3L 20769086 20769104 AATTCTTGCAGATGCTGCC 59 20769143 20769286 GAGTTCCCAATTCCTTAAAGATCC 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078254 3 1 3 104 3L 20792065 20792084 TCATCTGTCCAAGTCTCGTC 59 20792305 20792323 TCTTGATCTCCATGCCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288,FBtr0301579 3 2 2 173 3L 21026066 21026084 AATCCGAGGTGGTCTTTCC 59 21026285 21026303 AAACGTCAAGTGTTTCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 3 2 2 82 3L 21439404 21439425 GCCTAAGCGAAATAGATTTCCA 59 21439468 21439553 CATCGTGGACACATTCTGC 59 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 2 2 2 110 3L 21513428 21513511 CTTACGGACAGGTTTACAAGG 58 21513583 21513601 CACGAACAGCTGTAATGGG 58 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089797 3 1 3 107 3L 21522001 21522070 TTAAGGTGACGAGCTCTACTG 59 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 2 2 2 135 3L 21626118 21626136 TCATCACTGCCCTTCACTG 59 21625925 21626025 CAGTGCTGTCCATATCATTATACTG 59 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486 1 1 2 81 3L 22063916 22063935 TCCCACGGGAGAATATTCAG 59 22063249 22063877 GTCTCCTTCATTAACTGAATGAGC 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 2 4 4 115 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 1 2 2 80 3R 24424 24442 ATGCATATTCGCTGCTTCC 58 24483 24561 CAATAGCTCGACAGCATATAGG 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 2 5 5 128 3R 66128 66146 AGCAAGAGGACTTGGACTC 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 3 2 2 67 3R 214103 214188 ACTTCCTAAATGAGTCCACC 57 214218 214236 CAGCTCAAGGCTTATGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 1 2 4 80 3R 271101 271122 TGGCTAACTGGACATTATAGCT 59 270273 271061 GGCATGAACCATCCTTAACG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 2 2 4 80 3R 271102 271123 TTGGCTAACTGGACATTATAGC 58 270274 271062 GCATGAACCATCCTTAACGT 58 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0110958 3 1 2 81 3R 768438 768457 AGTTCGTCTTCAAGCTTTCC 58 768501 770705 TCCAGCCATCTGTTGTAGG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 1 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 CG31542 FBgn0051542 FBtr0078786,FBtr0302421 1 2 2 62 3R 1195903 1195921 GAGTCAGAACCCGAACTCC 59 1195947 1195965 ATGACGCACTTCTTCTGCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 3 3 3 90 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210503 1210522 ATATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 3 3 3 85 3R 1468679 1468756 ACATCACACTGTTTCACGC 59 1468612 1468630 AGTGGAAGGAACTAGCGAC 59 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 1 2 4 82 3R 2479835 2480203 TGGATGAAGATCTCCAATGCT 59 2480247 2480265 GTTCTCGTCTTCGGAGACC 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 1 2 5 98 3R 2584143 2584201 CAAGCCAGATGTCTTTCCC 58 2584063 2584082 TCTGCTATTTGAGAGCTGGT 58 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 2 2 2 122 3R 2972596 2972675 TACTCGAAGATGAATCCGC 57 2972492 2972510 ATATAGCGTTGAATCCGGC 57 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081550 3 1 2 99 3R 3346786 3346864 GGGCTTTGGGATTTATGAGTC 59 3346707 3346727 TTGTTCTTGATCCACTTGAGG 58 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 3 2 2 197 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625525 3625543 CGTACGACCTGTACATGTG 58 NA Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0081784 3 1 2 127 3R 3830474 3830494 GAATGTATTGGATCGGTTGGC 59 3830583 3830991 CTCGTCCGTACTGTTCCTG 59 NA Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 3 2 2 80 3R 4600741 4600759 ATTGGGTAACACCGCTCTC 59 4600615 4600703 CCATCCAAGTAAATCTCATATCCTG 59 NA Nonspecific Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 2 2 2 80 3R 5575746 5575767 AAGGATATGGGCTATGAAGTGG 59 5575804 5575882 GCCCATAGTATCACAATAGTTCG 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 1 9 9 80 3R 5845147 5845240 TTATCAATCGCTATCGTCCTG 57 5845087 5845105 ATGACAGCTCATTGCACTC 58 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 1 2 2 104 3R 5988995 5989013 TCCTGTCTAATGCAGCCAC 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300079,FBtr0300078 2 2 3 84 3R 6640189 6640207 CGGATGCTCCTATAACCGT 59 6640065 6640141 ACTCCTTCTCCCTTCTGGT 59 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 1 3 3 123 3R 7504585 7504674 AACACTCCCATGCTTACCA 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 3 3 3 97 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595737 7595755 CAGGTGTGACGAGTAGTCC 59 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 2 2 2 81 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617677 7617697 TAGTCTACGGGAATGAAGTCC 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 2 2 3 121 3R 7777492 7777510 GAACGAAGAGATTGCAGCC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 2 2 3 80 3R 8228132 8228153 TTATTTCTACGGAGCAAGTGAC 58 8228194 8228268 TGGTCACAACTTCCAATGC 58 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 1 5 5 73 3R 8270798 8270816 TACCTCATGGTCACCTCTG 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 1 2 6 81 3R 8522010 8522793 ATAGTCATGCAGGTGGCTG 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 1 3 3 80 3R 8795400 8795423 TGACGAGGATATAAAGACCTACTC 59 8795253 8795362 CTGCTGCCATACTTCTTCTC 58 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 1 5 5 81 3R 8845523 8845623 AAATACACGAGAAGGTCCTC 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 3 1 1 84 3R 9089695 9089713 ACCTCCAGTTAACTCAGGA 57 9089569 9089587 CGAGGATATTTCAGCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 1 5 5 80 3R 9795380 9795400 GATTCATATACACGGGCAAGG 59 9795252 9795340 CGAGTGCATACTTATCAGCAG 59 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 1 5 5 80 3R 10090935 10090956 CGATAACCTTGTAGTTGATGCC 59 10090816 10090896 GAATAGCAATTCGGCTCACAG 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 2 7 7 88 3R 10634008 10634095 CCTACGTTAAGGTGTATCTACTG 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 88 3R 10634007 10634092 ACGTTAAGGTGTATCTACTGC 57 10633939 10633957 GTCGAAGATGGGATTCAGC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083080 3 1 3 99 3R 11138920 11138939 GTCCATCAAGTTGAAGGAGG 58 11139001 11139323 GAAGAGACGGTCCTCTAGC 59 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 2 2 2 149 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188898 11188916 GGAAGTGAACTGGGTTACG 58 NA Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 3 3 3 97 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616525 11616546 TTCTTTGTGTAGCTTCTCACTG 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 4 5 194 3R 11723421 11723504 AGCTAAGTGGAAATGCTCG 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 4 5 195 3R 11723421 11723505 GAGCTAAGTGGAAATGCTCG 59 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 1 2 2 88 3R 11790852 11790872 AGGCTGAACTATTTGCTATCC 57 11790730 11790803 CAGCTCCTCTACCTTTAGTG 57 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216 1 1 3 108 3R 11825682 11825700 ATTTCGGCTGCTAATGCAG 59 11825770 11826343 CGAATAATGTTGCTGACAACG 58 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221 2 1 2 156 3R 11860814 11864312 CTGAGTGATGGCGATTCCA 59 11864430 11864450 TACTGTGGTACATCTTGACGG 59 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253 2 1 2 87 3R 11998234 12000041 TCTTCCAGCTAACGGATGTG 59 12000088 12000109 TTAGTGTGCAACAGATCTAGGT 59 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 1 3 3 81 3R 12894607 12894696 CCTTTGAAACCAATAGGGCTG 59 12894739 12894757 ATGCTGAAGTAGTCGACGG 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0089471 3 1 5 156 3R 12932800 12932818 CTCCGTGGAAGTAATTCCG 58 12931522 12932681 ATTCATGATCACACTTGGCT 57 NA Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 1 2 2 139 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264946 13265027 TCCAACACAATTATGTCGCC 59 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 3 5 5 114 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132725 14133184 GGATACAGGATGGGACTGG 59 NA Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307 1 1 2 94 3R 14191460 14191479 CTGGAGATGATAATACGCCA 57 14191327 14191404 CTCAGTCTTCACATCTGGAG 57 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 3 1 1 72 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192798 14192816 GATGGACGTTAAACACGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 2 5 5 84 3R 14585654 14585785 CCTGAAAGATCCGGACTGG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100127 1 1 7 107 3R 15579575 15583548 TGGCACAGATAATAAGGCCA 59 15585997 15586015 TCACGGAAGGTTAACTGCA 59 NA Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 3 2 2 80 3R 16114816 16114835 ATATACGGATGTGTTGCACC 58 16114878 16114964 GCATCCAGCGTAATATCCG 58 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 3 3 3 82 3R 16562582 16562600 GTTCCCTAGATGGGAGGGA 59 16562643 16562719 AGCACAGCATTGACATTATGAG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 3 9 9 158 3R 16791619 16791640 AGAAATTGATCATTGTCGAGGG 58 16791759 16792135 AAATCATGTCAGCAGCCTG 58 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 3 4 6 91 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615472 17616438 CGCACGAATATAAGCACCG 59 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0084139 1 1 2 80 3R 17701286 17701304 GGCATACTTTGTGTTCGGC 59 17701347 17701450 CCATGTCGGAACAGTATGGA 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 2 3 3 80 3R 18338652 18338818 GGTCGACAGATACTACGCC 59 18338861 18338880 AATAGCATGATGAACACGCG 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 2 1 1 165 3R 19237992 19238010 GTGGTACGAGAACCAACAG 58 19237714 19237732 CTGTTGTCCTTGTCCTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 2 2 3 103 3R 19350705 19351229 AGATCTCTGCGGAAAGAGC 59 19350620 19350639 CTATAGTAGCCTCCTCGCTC 58 NA Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 1 1 1 68 3R 19362175 19362193 ATATACGTGTTGCCCAGCT 59 19362072 19362092 TAAAGTCCAGAACTTGGTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 3 2 4 180 3R 19457898 19458234 GGACGAGTGTTAAGTCAGG 57 19457736 19457754 TTACCAATCCCGTCATCCT 58 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 2 3 3 80 3R 19574386 19574470 GCCGACATTATCATCAAATGG 57 19574510 19574530 TTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 1 2 2 80 3R 19822358 19822380 CCGATTGAGTTTAGATGAGAAGG 59 19822420 19822498 TGATCAAAGGCGTGAAGAC 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 3 2 7 113 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984885 19984903 TTCGATACAGCTTGAGCGA 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 3 2 7 113 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984885 19984903 TTCGATACAGCTTGAGCGA 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 2 4 7 113 3R 19985036 19985205 TACCCATTACCCGTATAACGG 59 19984885 19984903 TTCGATACAGCTTGAGCGA 59 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530 3 1 2 106 3R 20118598 20118618 TTAAACAATCGATCTCGGCAC 59 20118686 20118863 AGGTTACTTCCATCTGGGC 59 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622 2 1 3 82 3R 20209179 20209878 TGATATTCCGACTGGATGAGC 59 20209117 20209135 ATGGCTGTGCATGATTTGC 59 NA Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 2 1 1 246 3R 20356000 20356018 GTTCCTACTGCGACAAGTG 58 20355711 20355729 AAACTGTCGGTCATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 3 3 18 82 3R 20521108 20521126 GACGCTGATCAAGAAATGC 57 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100624,FBtr0100638,FBtr0084684,FBtr0100627,FBtr0100634,FBtr0100622 1 7 18 80 3R 20521107 20521126 AGACGCTGATCAAGAAATGC 59 20521838 20528754 GAGTGATATCACCTAAGTCATCG 58 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 1 1 1 79 3R 20544868 20544886 TTCTGGAAGGAGCACAAGG 59 20544738 20544756 GGATTGTAGGCTCCATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 2 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113384,FBtr0084928,FBtr0084927 3 3 7 94 3R 21532076 21532094 GATTAACGAGCGGAGTCCT 59 21527375 21532020 TTGTTTCAAGATCTTCGACGC 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 2 3 3 96 3R 21717670 21717688 AATGGTCAGGGTTCATCGA 58 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641,FBtr0084952 2 2 3 168 3R 21817553 21818125 GTTCCCACTCTTCAGAACG 58 21818575 21818593 GTAAGACCTCGGGATCGAG 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084952 1 1 3 110 3R 21819198 21819398 CGGATAAAGCATTCTCATCGG 59 21819470 21819488 TAATTCGATGTTTGGCGCG 59 NA Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 3 1 1 87 3R 21885412 21885430 AAAGGGCGAAACAATACCG 58 21885533 21885553 TTTACTACCATACTCCACGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 1 2 2 80 3R 22095527 22095679 GGAGTCAACTTAGTGCCCA 59 22095722 22095741 TTTATCAGACTCGAGCAGGG 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 2 2 3 119 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687903 22687922 GAGTTTACATTCCGTGGTGG 59 NA Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 2 2 2 81 3R 22984546 22984564 GCGGAGCTATGATATCCGA 58 22984663 22984741 CGGATCTCATAAAGATCGTTCTG 59 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 1 1 1 78 3R 23314693 23314711 TACTGGCTCTACCTCAGCA 59 23314820 23314838 GTTTGATGCACTCAACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 1 4 4 158 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463920 23463939 CACGCTGTAGCATATCAGGA 59 NA Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 1 2 2 87 3R 23779656 23779732 TTATACCAGTACAAGAAGCACC 58 23779590 23779608 CATTCTTGGATTCCCGCTC 58 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582,FBtr0112583 3 3 3 131 3R 23904346 23908635 CGAGTAAAGAGAACATCAAGCC 59 23908727 23908745 TCTTCTGGAGGACCTCCTC 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0300337 1 1 4 80 3R 24347409 24348211 GGTTACAGTTAATGTTCATGCC 58 24347350 24347368 CAGCTCATGACAATGGTGG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 2 4 13 135 3R 24714130 24714148 GCTAACGCAACTCTTGAGC 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 2 2 4 83 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940205 24940226 GTGGACTTTCAATTATGAGGCT 58 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 3 3 3 80 3R 25073691 25073709 CCTGAACCGACAACTTGAG 58 25073566 25073648 GTAACCGAGATCCATTTGGT 57 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 3 4 5 87 3R 25297563 25298886 ACTGCAGAACTTACGACCC 59 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 1 3 5 83 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423185 25423894 CGTTGGACTTTCACATGGTC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 3 4 6 80 3R 25723353 25727909 CTGCGGAAGGAAATGAACG 59 25727951 25727971 TTGGATCGATTCGTTAAGCAC 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 2 3 3 92 3R 25864785 25864803 AGGTCTACGGATACTCGCA 59 25864605 25864623 TTTCGATCGTGTAGTCCGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0085593 2 1 5 141 3R 25871497 25871619 CCAACCTGCTTCAAGATGAC 59 25871313 25871331 TGTTGTCGATACCCTTGGG 59 NA Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 2 2 2 82 3R 26021214 26021232 AACTGCTCAAGGATGTGGA 59 26021088 26021171 GTACAGCAGGACATAGAATCTC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 2 6 12 139 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397642 26397662 CAGTATGGTTATCTCCTCGGG 59 NA Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 3 2 2 97 3R 27079871 27079889 AGGAGCCGAGTTACTTGTG 59 27079737 27079810 TCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 2 2 3 82 3R 27637149 27637168 AATATCCACAGTACAGCTGC 57 27637031 27637104 CGAGGGCAGATTATTGCTC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 1 3 22 81 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707522 27707543 CAGGTCCTGATTGTTATTGTCG 59 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 3 3 3 81 4 87357 87476 GACAAGTACAGGTCGATGG 57 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 3 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089993 3 2 4 109 4 585281 586044 GATGGAGGCAGGTTTAAAGG 58 586116 586134 ATCCGCATGTACACTCCTC 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 3 2 5 140 4 1042977 1042997 TTCTGCACTCTGCATTTACTC 58 1040631 1042878 GTTTGCAGTTTCGTTAGAACAC 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 1 9 9 80 4 1068496 1068515 GGATATCTGTCTCCTGAGGT 57 1068342 1068456 GTAAAGAATAACTCCACATGCC 57 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 2 3 3 93 4 1150105 1150202 TACAACATTCGACTTGGAGAC 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 1 2 4 194 4 1207178 1207198 CTTTCGGAAATGGATTACCCT 58 1208238 1208379 CCTTCTCAGGTATTGTAGATCG 57 NA Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 3 1 1 198 4 488183 488204 TGTTCTAGTCGAGTATTCACAC 57 488418 488438 TGGTCAGATCAATGTTGATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 3 4 4 106 U 1179112 1179131 GCCATTAATAACGCAATGGA 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 3 1 1 193 U 7798977 7798995 TATGACTAGAGCCAAGCGA 57 7799213 7799231 AAACGGTACCAAGTGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 1 4 4 103 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449554 3449572 TTGATACTGATCTCCCGCT 57 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 1 4 8 80 X 165641 166468 TCAGCGATGTTGATTACACC 58 165580 165599 TTGGGTCTACCTGGATTAGC 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 2 5 6 87 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640607 640627 TCAGTATGTGATAGCTGACCG 59 NA Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 1 2 2 94 X 1347991 1348058 TCTATACGATCGTGGGAGC 58 1348116 1348134 CTGTCCGTTGGAATCACTG 58 NA Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 2 2 2 121 X 1362208 1362291 GCATCGTTAAGGCCATCAC 59 1362376 1362394 CTCCTTCGTCTCTTCCACG 59 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 1 3 3 87 X 1365558 1365576 ATCCGACTGCCTCTTAAGG 58 1365627 1365699 TGAACAGAGACGAGATGGC 59 NA InUTR Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 2 3 3 89 X 1365558 1365576 ATCCGACTGCCTCTTAAGG 58 1365628 1365701 CATGAACAGAGACGAGATGG 58 NA InUTR Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 2 3 3 107 X 2609221 2609239 AGCTCTGTAACTCCTCCGA 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 3 2 12 179 X 3208475 3208494 ATGTGCTCCGATCTAATGAC 57 3208636 3215086 TTCTACATCGAAACTGCCC 57 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 1 4 12 121 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 2 3 3 69 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602942 3603880 GATTTGTTCTCTGAATTCCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632 3 1 3 82 X 3759462 3760543 TGAGTCTTCCACCCATTCC 59 3759398 3759418 GCCATAGTAGTTGAATCGCTC 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 2 5 5 113 X 4962727 4962745 AATCTCTGCGAGAAGAGCT 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 1 5 7 96 X 5277596 5277614 GACAATATGTCCGGGAACG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071095,FBtr0071094 3 2 2 123 X 7828194 7828212 ATGTCACTGATCTGTCCGG 59 7828299 7828376 TTCTCAGCCACATCCTGAG 59 NA Nonspecific Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 3 5 5 80 X 8408693 8409228 CTGCATAAGTGGTCTGGGT 59 8409270 8409290 ATGATCGGTTGAAACACTACG 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 3 4 5 80 X 8404727 8406393 CAATGGAAACGATCCCGAC 59 8406434 8406455 GTCGTGATGATTGAGCTTAGTG 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 3 2 6 84 X 8478881 8478902 GATGGGTACATCATCTACTGCT 59 8478947 8479851 CGAGCGAAACTGTCTTTCG 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595 3 1 5 165 X 8989677 8991398 CTTCAATACGGGCATGCTC 59 8989530 8989549 CAGATCTGTTACCGCTTTGG 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 1 3 3 80 X 9232368 9232387 CACCTGTAAGTTCTATCGCC 58 9232242 9232326 CAGTGATGATCGAAGGTCTC 57 NA Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 2 1 1 98 X 9503646 9503664 AGAAATCAGGAGGTGGCAG 59 9503794 9503812 TTCCCTGGTCTCCTTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112966 3 1 2 168 X 9782737 9782826 TTCTATTAGTGGAGAGGAGAATGG 59 9782524 9782610 GTACTTGGTGGCGTTTAGG 58 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 3 4 4 80 X 10655531 10655622 GTATCCCGATGATATTATCTGTCC 58 10655474 10655492 CGCACCTTGGACATAATGG 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 3 3 3 237 X 11322866 11322884 CCAGGGACCCTACTATTGC 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0300732,FBtr0300733 2 2 4 86 X 11331115 11331133 TCATACTTGGAGGTCTCGC 58 11330421 11331068 GGAGTTATTATTCTCCTGCAGC 59 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 3 2 3 81 X 11592562 11592580 CTAGTCGTTGATCCTTCGC 58 11592624 11594666 CACCCATTAACACCATTTGG 57 NA Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 1 2 2 80 X 11684958 11684976 CATCCACAGAGGAACTTCC 57 11685017 11685103 TCATCGTTATATGCTGATCCTC 57 NA Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 3 2 2 135 X 11747534 11747552 GAAAGATGACGTAGCGGAG 58 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 1 2 2 80 X 11980916 11980934 ACACCTATCAAGTTTGGCG 58 11980786 11980872 TATGCAACGACTTATCGGG 57 NA Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559 3 1 2 120 X 13308918 13309083 AGACACGCTAAAGTCAGAC 57 13309166 13309185 ATCTTCGGTGACCATTTCTG 58 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 3 2 4 81 X 13591263 13600186 CGACTATGTGAATGGCTTCC 58 13600227 13600248 CTTCTCATCCGTATTCACAACC 59 NA Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 2 1 1 66 X 13650625 13650644 CCATATGTACCCTATTGCCG 58 13650510 13650528 CTCCTCGCGTAAGTAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33247 FBgn0053247 FBtr0300096 3 1 1 60 X 13941494 13941512 AGTGAACTGGCAACATGTC 58 13941395 13941413 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 3 2 2 129 X 14127233 14127253 CTACCTCAAGGATAAGGACCC 59 14127060 14127145 GCTGTCCTTGAAGTCTAAATCG 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 2 4 4 106 X 14642087 14642674 CATTCGAGCCAATGGTCAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161 1 1 3 81 X 15831778 15833079 AAGAGCATAAGTTCCATGGG 57 15831716 15831734 GAACACTTCCACTGTAGCA 57 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 1 3 4 80 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190094 16190114 ATATTATCACTGGTCATGGGC 57 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 1 9 9 80 X 16270053 16270134 AGAGAACGAGGTGAAATGGA 58 16270177 16270195 GTGGGTAAGTCCTGGTACG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 2 9 9 80 X 16273082 16273101 CCATTTGGTTATGCATGAGC 57 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 1 5 5 108 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276867 16276947 CAAAGTTGTGCAAGTCCTG 57 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275 1 1 3 81 X 16309546 16309567 GACGACCATAGTCAAGTATGAG 58 16309609 16309698 CAGGTGTTCCGTGAATGTC 58 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734 2 1 2 81 X 16554607 16554625 GCCAAGATGGGTTACAAGC 59 16554668 16559233 GCACGGATTCCACATTAACTC 59 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354 1 1 2 178 X 16693604 16694569 CGTGGTTATAGAGCGGGAG 59 16693444 16693462 CTATCTGAAACCGCCTCGA 59 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074384 2 1 3 80 X 16995403 16996435 TAATCAGTGTTGTTAGCAGCAG 59 16996473 16996494 GTTATTTCCAGTGTTCTTCCCA 58 NA InUTR Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 3 5 6 117 X 17173693 17173777 TGGACCAGATCTACTTGCAG 59 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 3 3 3 80 X 17466487 17466567 TGCTGAAATGAATCTCTTCCC 58 17466427 17466448 CTAGAACTGGTTCCAGAATACC 58 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 3 8 8 84 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844724 17844743 GAATGATGGCGATTATGTCG 57 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0301545 2 1 2 180 X 18533650 18533668 GAGGACGAGTTTGTGTTCG 58 18531811 18533508 TGTATTTATCTTTCGCGCTGC 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 3 3 4 87 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228546 19234543 TGAAATAAGTTCCGAGCAGC 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718,FBtr0074719 2 2 8 219 X 19398494 19398513 TTGCGATTCGTTGTGTTCTC 59 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 1 2 5 80 X 19455823 19456738 GCGAGTTCATCCAGATTGAG 58 19455762 19455782 TAAATTCCAGATCAAAGCGCC 59 NA Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 3 3 3 80 X 19795512 19795911 CCGTATATGGAATATCCACCG 58 19795952 19795971 AATATGAGGCCCAGTATGGA 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 3 2 13 96 X 20105915 20105933 CAGGCTACGAACATTCCAC 58 20103227 20105857 GATTGTATTCATCATCGCCGT 59 NA Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 1 2 2 89 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291667 20291685 CTTCCTTCTCTGCATCGTG 58 NA Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 3 2 2 80 X 20385200 20385384 ATAAGCTTTACATCTCTGGTGG 58 20385425 20385443 AGACTTCCGTCTTTGTGTC 57 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 3 5 5 80 X 21228145 21228163 AGGAGAGCTACAATGTGGT 58 21228206 21228294 TGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 3 2 9 98 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499693 21499713 TATAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 2 1 1 119 X 21941650 21941668 ACATCAACCTACTGCCCTG 59 21940529 21940547 GTTTATGCTCCGGATCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CR11386 FBgn0260447 FBtr0299927 2 1 1 60 X 7791681 7791701 AAGACTGTGCGTAAATACACC 58 7791641 7791659 TGAGAACGACCAAAGTCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:R2:42Ab FBgn0011956 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Ec FBgn0011894 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30299 FBgn0050299 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G2173 FBgn0086028 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32273 FBgn0052273 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C3351 FBgn0086069 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:84Db FBgn0011999 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Ory FBgn0046323 FBtr0302286 1 1 1 80 YHet 233584 271130 TTGTGCAACAGCGTATAAACC 59 271169 271190 GTTCCACCATGTCTAATGAACG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-1135b FBgn0083011 FBtr0113574 3 1 1 61 X 17040538 17040561 CTGGCTATGTTCTACATACTTTCC 59 17040500 17040521 CTTTGGTTCACTATTAGTCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111192 3 1 2 62 X 22415903 22415921 TCAAAGTCCATGCCTAGGG 59 22416291 22416309 TTTGGTCAGAAACTCCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG41106 FBgn0069938 FBtr0111194 1 1 1 195 X 22347662 22347680 TCTCATCCTACTTCCACGG 58 22347839 22347919 AAGCGCTAATTAACTCGCG 59 NA InUTR Drosophila melanogaster 61 CG15452 FBgn0031130 FBtr0077292 3 1 1 93 X 20616443 20616722 GATCGATGTGCCATGATTCG 59 20616369 20616388 TTATCCTGTTCGACCTCCTC 58 NA Drosophila melanogaster 61 CG12702 FBgn0031070 FBtr0074809 2 1 1 108 X 19654453 19654529 GTAGCAAAGCATGTGTCTG 57 19654363 19654381 AGATCGAGCTTAGATTGCG 57 NA Drosophila melanogaster 61 CG12702 FBgn0031070 FBtr0074809 1 1 1 94 X 19653996 19654084 CTTATTAGCCAAGAACGGCTG 59 19653922 19653942 AATTGCTTGAGCAGGATTGTC 59 NA Drosophila melanogaster 61 CG14216 FBgn0031054 FBtr0074747 2 1 1 98 X 19558891 19558973 CAAGGACAAGGAGTTCTACAC 58 19559033 19559051 TCTTTGGTGTCCTGAAACC 57 NA Drosophila melanogaster 61 CG14204 FBgn0031032 FBtr0074729 1 1 1 80 X 19478393 19478474 CATATTCACAGTCGTTCTACTGTC 59 19478512 19478531 TCCGGACACAAGAAGTAGTC 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299623,FBtr0299624,FBtr0299622 1 4 4 80 X 19038525 19038611 CAATGTGTTTCGCATCAACC 58 19038464 19038483 AGGTACAAACTGTTCACCTG 57 NA Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 2 2 2 80 X 18548883 18548902 AACATCTTCTGGTCGGTCTC 59 18548756 18548842 GTACTCTTCGCGAATGTTCAC 59 NA Drosophila melanogaster 61 CG6179 FBgn0030915 FBtr0074558 3 1 1 176 X 18274833 18274851 GATGTGAAGTTCACGCTGC 59 18275051 18275069 CTTTCTGATCAGCCGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 3 2 2 143 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208838 18208856 GTACACAAAGTCACCCAGC 58 NA Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074585 1 1 2 60 X 18153216 18153238 GGTAGGTCCAAGATAAATCTGTC 58 18153178 18153197 GGATTGCAGTACTGCTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 3 3 3 81 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027153 18027172 CGTACGTGTACATGAGAGTC 58 NA Drosophila melanogaster 61 CG32557 FBgn0052557 FBtr0074466 3 1 1 167 X 17748761 17749268 CTACCTCCAGTCCAAATTCC 57 17748613 17748631 CACACCTCGATGTTCATCC 58 NA Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 3 1 1 61 X 17484485 17484560 AGGACACTGTGAAACAGCA 59 17484584 17484603 CGATGGATTCCTTCGATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539 3 1 2 62 X 17116191 17116209 CAGAAGAACGGAGGAGGTG 59 17116559 17116579 CTATGCCATGGAACACAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8918 FBgn0030823 FBtr0074403 2 1 1 90 X 17096279 17096297 ATGGAACTTCTATTGGGCG 57 17096156 17096228 GTTAATGACTTGATCTGATCGC 57 NA Drosophila melanogaster 61 CG9086 FBgn0030809 FBtr0074415 3 1 1 87 X 16854231 16854249 CTTGAGCTTCTACGAGCGT 59 16854094 16854181 ATAATGAGCCTCCAACCTCG 59 NA Drosophila melanogaster 61 CG9086 FBgn0030809 FBtr0074415 1 1 1 86 X 16854231 16854249 CTTGAGCTTCTACGAGCGT 59 16854095 16854181 TAATGAGCCTCCAACCTCG 59 NA Drosophila melanogaster 61 spheroide FBgn0030774 FBtr0074363 2 1 1 122 X 16595435 16595717 GGAAAGCTAATCGATGCCA 58 16595331 16595354 GTTGTTCAGATTATAGTAGTCCGG 58 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 1 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 1 3 3 103 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802264 15802282 TGCGTACTGATTTGCTCGA 59 NA Drosophila melanogaster 61 CG15914 FBgn0030700 FBtr0074105 2 1 1 84 X 15747910 15747981 GATACTCTCCTGTCTTGCC 57 15748028 15748047 AAAGGGCTGAACATTATCCA 57 NA Drosophila melanogaster 61 CG8959 FBgn0030691 FBtr0074192 1 1 1 123 X 15676030 15676688 TAGCTCGAGAGTTCGAAGG 58 15675925 15675943 TTGTTTCCAGTGTTCAGCG 59 NA Drosophila melanogaster 61 CG42299 FBgn0259195 FBtr0299679 2 1 1 60 X 15469671 15469689 AAATGGACCCGAAATCCCA 59 15469571 15469648 GAATTGGACACGACTTCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074001 2 1 2 79 X 15187868 15187886 ATCAACAGATTCTGCGGCT 59 15188372 15188390 TTTCTCGAATCGCCTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG9101 FBgn0030622 FBtr0074024 1 1 1 60 X 15123369 15123479 TATCCAACGAATGCCAACG 58 15123327 15123345 CACCTGCTGAATCAGTCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG33178 FBgn0053178 FBtr0073963 3 1 1 112 X 14977067 14977303 GGTATAAGATCTTTCCCAACCA 57 14977527 14977545 GTTCTCCATGTCATTGCGA 58 NA Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 2 2 2 104 X 14944078 14944097 TGAGCTAATGAAGCCTTTCG 58 14944162 14944243 TTCTTAAAGGCTTGACTCTCG 58 NA Drosophila melanogaster 61 CG9521 FBgn0030588 FBtr0073985 1 1 1 60 X 14746596 14746615 TTCAAGAAATACGAGGGCAG 58 14746555 14746574 CATTGCGACCAACATAATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5347 FBgn0030578 FBtr0073936 2 1 1 60 X 14671649 14671669 GATTGCAAGTACTTCAATGGG 57 14671690 14671709 TGTAGAAGCACTTGTTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18313 FBgn0030566 FBtr0073915 3 1 1 116 X 14274390 14274408 TTGATTCACATCTCGGAGC 57 14274542 14274560 CTGTCGCTTGTTGAAATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(1)dd4 FBgn0001612 FBtr0073841 2 1 1 81 X 13636401 13636421 CTAAGAGAAATCTGCGAGGAG 58 13636266 13636360 TTTGAGAGGCACTAGATTCCA 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 3 7 10 124 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488362 13488380 TTCTCGTTCGAGTCCTTGG 59 NA Drosophila melanogaster 61 CG33651 FBgn0053651 FBtr0091628 3 1 1 61 X 12785772 12785791 TACAGACGACCTTAAGGAGG 58 12785730 12785748 AATGTGGTTTGCTCCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2750 FBgn0030376 FBtr0300918 1 1 1 80 X 12001618 12001636 ACAACCCAAACGATTTCGG 59 12001678 12001819 CCGTCTCATAGGTCATATCCC 59 NA Drosophila melanogaster 61 Upf1 FBgn0030354 FBtr0073596 3 1 1 180 X 11798999 11799078 AGGTACTATAGATCTCATCGCG 58 11798840 11798858 GTAATCGTACTGCGTGGGT 59 NA InUTR Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 3 4 4 141 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698359 11698377 GGTCAACTGATTCTTGGCG 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073617 3 1 5 103 X 11607830 11608515 GACAAGAGCAGTACGTTGAC 59 11607746 11607767 TTTGGTGTAAGCTACTATACGC 58 NA InUTR Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073504,FBtr0073503 1 2 2 70 X 11376586 11376604 CACTACTACGCCTTTGTGC 59 11376734 11376752 TTGAGCATCGCATACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 3 2 2 81 X 11126737 11126755 ATCCAACCTTATACGCCCA 58 11120101 11126692 TGAACAAAGTCCTCGAAGC 58 NA Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 1 1 1 92 X 11022094 11022199 GAACATCAACAGCGAGCTG 59 11022020 11022038 GATGCATCCTCGTTGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299861 2 1 2 69 X 10930230 10931515 CTGTGGAGGAGTCTTTAGGC 59 10930180 10930198 GTGCTTATGGCAGTTTCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rab9Fb FBgn0052670 FBtr0073401 2 1 1 60 X 10846078 10846097 GCAACAAGTGTGATGATCTG 57 10846037 10846056 GCATAGTTGAAACCCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15208 FBgn0030247 FBtr0073383 1 1 1 60 X 10795323 10795341 GTTTACGATGACTCCGCAG 58 10795362 10795383 CGATGAAATTGACTGAATACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1826 FBgn0030228 FBtr0071497 3 1 1 82 X 10663253 10663273 AGGTTTGCCTAATGTTCATGG 59 10663317 10663389 CAGCGATTCCTTGGATAGC 58 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 1 3 3 85 X 10641994 10642012 CTATTTGGAGTGCGGACTG 58 10642057 10642150 GGCCATTATAGATCATATCCCTC 58 NA Drosophila melanogaster 61 CG32679 FBgn0052679 FBtr0071469 3 1 1 102 X 10261402 10261423 AAACTATTGCGATCCAGAACTG 59 10261189 10261207 ATCCACTTGGACAAACTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG2974 FBgn0030178 FBtr0290234 1 1 1 167 X 9979510 9979528 GAACTAATGCAGCAGACCA 57 9979303 9979321 CAAGTAGTGATGTTCGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Yp2 FBgn0005391 FBtr0071424 1 1 1 83 X 9946438 9946456 ACCTGAAGGAGGTTACCCT 59 9946305 9946392 ACAGATGGTAGAGCTTGTCC 59 NA Drosophila melanogaster 61 CG42262 FBgn0259147 FBtr0299576 2 1 1 105 X 9762434 9765393 TATAATGCAGTCCAGCGTC 57 9762347 9762366 GATTGTAGAAGATCAGGCGG 58 NA Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 1 2 2 92 X 8985203 8985454 CACAGCGTATTGAGAATGCC 59 8985509 8985527 AATCGACCTTGATGCTGCT 59 NA Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071263 3 1 2 185 X 8867403 8867695 AGACCACGAGCATCAATCC 59 8867236 8867255 ATCAGAAATATTCGCCCACC 58 NA DesignRelaxed Drosophila melanogaster 61 Caf1-180 FBgn0030054 FBtr0071228 2 1 1 82 X 8497906 8497992 CAAGTGATAGATTACCTTTCACCG 59 8497847 8497865 TACTTGGCCTTCATTCGGG 59 NA Drosophila melanogaster 61 Caf1-180 FBgn0030054 FBtr0071228 1 1 1 81 X 8497906 8497990 AGTGATAGATTACCTTTCACCG 57 8497846 8497864 ATACTTGGCCTTCATTCGG 57 NA Drosophila melanogaster 61 Cp36 FBgn0000359 FBtr0071203 3 1 1 64 X 8373394 8373412 AACTCGGTCTCTGGTTTGG 59 8373529 8373547 ACCATAGTTAGCGCTCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32713 FBgn0052713 FBtr0071243 3 1 1 64 X 8351277 8351299 GTTATGTTTACACTGATCGGTGG 59 8351235 8351253 GGATTGACTAGGCCACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12123 FBgn0030039 FBtr0071245 1 1 1 192 X 8335898 8335916 GGAGAAGCACACCATTGAC 58 8335666 8335686 TCGCATGCCAATCTTTAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15345 FBgn0040928 FBtr0071176 2 1 1 166 X 8292172 8292249 TGACAAAGTCGAGAATTTGCC 59 8292026 8292044 GTTTCGGGTAGGAAATCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 1 3 3 90 X 7991393 7991476 AATCATCAGGATTATTTGGGCG 59 7991324 7991342 TGACCATGTCCACCAAGAC 59 NA Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300900 3 1 4 97 X 7787510 7787628 TTTATTACACCTATGGGCAGTG 58 7787434 7787452 GCGTAAATCGATCCGACTG 58 NA InUTR Drosophila melanogaster 61 CG15035 FBgn0029949 FBtr0071063 2 1 1 60 X 7297112 7297131 TGGATGTCGAAACAAGTCTG 58 7297071 7297089 TTGATGCCTTGCTGAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 3 2 2 198 X 6964964 6965450 AAGAGGTGGACTACGTACC 58 6965610 6965630 GCATAGACAATGATCACCACC 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0148 FBgn0028360 FBtr0070950 3 1 1 85 X 6549440 6549458 ATTCAATGGAGCTGCAGTC 58 6549507 6549594 CATTGATGGCTTCTTCGCT 58 NA Nonspecific Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070904 2 1 2 131 X 6235369 6236109 TCATACGGAATTCGACTAAAGC 58 6236201 6236219 GGAATACTGTTCCTGGCAC 58 NA InUTR Drosophila melanogaster 61 CG3781 FBgn0029853 FBtr0070895 2 1 1 60 X 6155653 6155673 GATCCACACTGTCTCAATCTG 58 6155695 6155713 TCTGAGCCGGTACATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952 1 1 2 87 X 5934806 5935625 GCAAATCGCTTACGATAAGCT 59 5935674 5935692 CAGAGCGGTAAAGCAAACG 59 NA Drosophila melanogaster 61 Tre FBgn0003747 FBtr0070802 1 1 1 85 X 5575442 5575528 TTTCACTGATGGAACACCTG 58 5575576 5575594 ATAGGATTCCACGGGATCG 58 NA Drosophila melanogaster 61 CG12681 FBgn0029730 FBtr0070717 1 1 1 60 X 4770533 4770552 GCAATGGATTTGATGAACGG 58 4770572 4770593 CCAACTTAATGTACGATGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070704 2 1 4 80 X 4582045 4585674 TTAGCATCCCTACATCGTTACC 59 4585709 4585733 CTTACAACTTCACTGGAATCTAACC 59 NA InUTR Drosophila melanogaster 61 CG12685 FBgn0040910 FBtr0070673 1 1 1 103 X 4409689 4409707 ATATGGGATGTGCGATGCA 59 4409773 4410064 GACACAGCACATGACAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG2982 FBgn0029704 FBtr0070648 2 1 1 148 X 4213497 4213515 GTTGTAACAGTAGGCACGT 57 4213689 4213707 CTGTTGCCTTGAGACTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6428 FBgn0029689 FBtr0070625 1 1 1 80 X 3861483 3861501 GAATATACACCGCTGCTGG 58 3861362 3861441 GTACGATTGCTGAATATCGCT 58 NA Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070587 1 1 2 133 X 3467502 3467520 AAAGTGAACGATGACACCG 58 3467320 3467405 TTATCGGGCGTATTCAGCA 59 NA Drosophila melanogaster 61 N FBgn0004647 FBtr0070507 3 1 1 83 X 3063648 3063760 GGATTGCATCAAGAATGCG 57 3063804 3063825 GAGTAGGCATAATTATCCAGCT 57 NA Drosophila melanogaster 61 CG14416 FBgn0040352 FBtr0070567 1 1 1 228 X 2766818 2766836 TTATTCGCACTTCTCGTCG 58 2766553 2766571 TAGTTGTGGTCGATGGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 w FBgn0003996 FBtr0070490 1 1 1 80 X 2685571 2685794 TATTCAGACAACGATGGTTGC 59 2685511 2685531 ATATTCATCACACCCACTTGC 58 NA Drosophila melanogaster 61 CG2650 FBgn0000092 FBtr0070504 1 1 1 186 X 2587677 2587779 CTCCGAAGGATTTCCATCG 58 2587509 2587527 CTTTATCGACTCCGAGTGG 57 NA Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302447 3 1 4 84 X 2475135 2477033 CCCGTTTCAAGATCTTCTTTACC 59 2477075 2477095 GGTGCAATCATCTTGTACTCC 59 NA InUTR Drosophila melanogaster 61 Or2a FBgn0023523 FBtr0070397 2 1 1 135 X 2141285 2141303 ACTGGATAGAACAGCTGCC 59 2141402 2141490 GTGAACCTCATGACCTGCT 59 NA Drosophila melanogaster 61 Mct1 FBgn0023549 FBtr0070393 3 1 1 80 X 2092964 2093861 ATACACATAGTTACCGATGGCA 59 2093900 2093920 TTTGCCCTCGTTGAAATAGTC 59 NA Drosophila melanogaster 61 CG4025 FBgn0025624 FBtr0070375 3 1 1 99 X 1971286 1971304 CCACGGTTCCCTACATCAG 59 1971365 1971497 ATGGTAATTCCAAGCAGAACG 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070337 2 1 7 148 X 1964533 1964551 GAACGTTCTCTTAGCTGCG 59 1962360 1962378 CTTGTGTACTCCGAATCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 80 X 1962454 1965408 AAGGAGAAGTCGACAGGTG 59 1962392 1962410 CGTCGACATGGTTGTACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 2 3 3 87 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862014 1870614 CCTGGCATGTCACATTCAC 59 NA InUTR Drosophila melanogaster 61 mip130 FBgn0023509 FBtr0070315 3 1 1 82 X 1802376 1811016 ACTGTACCCTATGCTTACCG 59 1811061 1811079 AAGCTCCTGCCTTCTTACC 59 NA InUTR Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 3 3 3 84 X 1674790 1674809 CTGAAATAGTCTCCAGGCGT 59 1674856 1675766 GACTGATATGCTGTGGCCT 59 NA Drosophila melanogaster 61 CG14809 FBgn0040898 FBtr0070276 3 1 1 193 X 1651297 1651317 TATTTCTACTTCGGATTGCCG 58 1651124 1651142 CAAAGGATGCTGGACTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 png FBgn0000826 FBtr0070234 2 1 1 60 X 1250746 1250764 TACCAGACATCTTCCACCT 57 1250704 1250725 CTGAAGTAATGCTTGTAGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14629 FBgn0040398 FBtr0070179 3 1 1 60 X 945949 945967 TCGAGAAGTATTGCCTCCG 59 945990 946009 GCGTCGTTGAAGTTCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14629 FBgn0040398 FBtr0070179 2 1 1 60 X 945947 945966 CTTCGAGAAGTATTGCCTCC 58 945986 946007 GTCGTTGAAGTTCTTCAGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CDC45L FBgn0026143 FBtr0070182 1 1 1 85 X 923505 923523 GCCTCCAAGATAACCTTCG 58 923386 923456 TAGCGGGAATACCTCATGG 58 NA Drosophila melanogaster 61 arg FBgn0023535 FBtr0070088 1 1 1 80 X 420623 421600 TATGCAATGGATACCATCGAC 58 421641 421660 CTTGTTCTGCGGATTAAGGG 59 NA Drosophila melanogaster 61 cin FBgn0000316 FBtr0070064,FBtr0070065 2 2 2 60 X 151447 151517 AACATAAAGCCAGGGAAGC 58 151535 151559 GACCAAAGAAGTACTTATCTTTCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17636 FBgn0025837 FBtr0112921 2 1 1 110 X 21962 21982 GCCAAAGCTATTTATGGAGGG 59 21787 21893 CCATCGAACATTGTAACTTTGC 58 NA Drosophila melanogaster 61 CR40502 FBgn0085737 FBtr0114187 1 1 1 60 U 9882183 9882203 CATTATTCTGGTTGATCCTGC 57 9882222 9882243 CATGCATGGCTTAATCTTTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42412 FBgn0259843 FBtr0300137 3 1 1 95 U 6404933 6404951 CGAATTTCTCTGCCACGTG 59 6405010 6405028 CTTCAGGATCCGTCCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42412 FBgn0259843 FBtr0300137 1 1 1 72 U 6404956 6404976 CCAACTACTTTCAGGACTCGT 59 6405010 6405028 CTTCAGGATCCGTCCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42619 FBgn0261334 FBtr0302236 1 1 1 95 U 3776163 3776181 GAGTTCGCAACACTTAGGA 57 3776032 3776104 ACCCTATTACATGTGCCCA 58 NA Drosophila melanogaster 61 CG41527 FBgn0085670 FBtr0302258 1 1 1 60 U 3398182 3398202 AAATCGTAGACCATGCTACTC 57 3398218 3398242 CTCTATTGAGTAATATTGCCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gpa2 FBgn0261386 FBtr0113763 3 1 1 60 U 2295941 2295959 GGTCTTCTCAACTGCTGGT 59 2295899 2295919 ATTGAGTTACTATCGCACAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rfabg FBgn0087002 FBtr0089188 1 1 1 101 4 1093996 1094071 TATTGATGGCATACGCACC 58 1094136 1094154 ACAATGGACTTCTGAGCCT 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 1 7 7 81 4 1078301 1078324 CAAGAAGAAACGATCAGAGTAGTG 59 1078183 1078261 GTAAGAGCCCACAGTCCTC 59 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129,FBtr0089128 2 2 2 81 4 402788 402811 CCTACTGTGATCGTAGATTTAAGC 59 399508 402751 CATTTATAGGGTCGTTCTCCTG 58 NA Drosophila melanogaster 61 snoRNA:Me18S-G1189 FBgn0086058 FBtr0114334 1 1 1 60 3R 10197449 10197468 TCCCTAATGATGCTGGACTG 59 10197408 10197428 TCAAGATCTCAAGAGCAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18228 FBgn0037560 FBtr0300631 1 1 1 112 3R 4087591 4087609 AGAGTACTGGCCATTACGA 57 4087296 4087320 CTCAGAATAGTGTATCTGCAAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:CR31485:Psi FBgn0051485 FBtr0081662 3 1 1 60 3R 2645030 2645049 TTAGTTGGTAAAGCGTTGGA 57 2644989 2645009 ATCTGAGCATGAACTTGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4atac:83A FBgn0052861 FBtr0078791 3 1 1 88 3R 1216916 1216934 ACCCAACTTTACCGTAACC 57 1216985 1217004 CCACGATTCAATCTTGAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085851 2 2 3 97 3R 27636788 27636806 TCAGACGAATCCCTACAGC 58 27636650 27636730 GCTTAACATAGCCCTTAATGGC 59 NA Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847,FBtr0085848 2 2 2 60 3R 27631894 27631915 GCTTTCTAGAGAAGATTGGCAG 59 27631936 27631954 AAGAGCTGACTTCCTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847,FBtr0085848 1 2 2 60 3R 27631899 27631918 CTAGAGAAGATTGGCAGCGA 59 27631941 27631959 ACCCAAAGAGCTGACTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 2 2 2 171 3R 27286783 27286801 CAAGAAATCACTGCGGCAG 59 27286572 27286648 CGCGTCCAGAAATCTATGC 59 NA Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0085758 3 1 2 80 3R 27047179 27051545 CCCACATAGACTATGACCCA 58 27051587 27051606 GCAGGACATAACTTAAGGGC 58 NA Drosophila melanogaster 61 CG15554 FBgn0039820 FBtr0085736 3 1 1 137 3R 26951971 26952376 TTTGTTTGGCTGTTAACCCT 58 26952475 26952494 GATTATCCGTCGCAACTGAG 58 NA Drosophila melanogaster 61 Sox100B FBgn0024288 FBtr0085735 1 1 1 95 3R 26899017 26899037 GTCATGTCCAAACAGTATCCG 59 26907623 26907641 GGGCTTCTTATCACTGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31007 FBgn0051007 FBtr0085747 2 1 1 60 3R 26817779 26817797 CAACAGGAGGGATCCTTGG 59 26817737 26817756 CCACTAGTTGAGGTTTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15537 FBgn0039770 FBtr0113310 3 1 1 102 3R 26261872 26261948 CTAATGGCGTTTGTCGACG 59 26261788 26261807 TGTTGCAGAACTCGTAAACG 59 NA Drosophila melanogaster 61 CG7896 FBgn0039728 FBtr0085545 3 1 1 87 3R 25812888 25812973 CGAATATGCTACAGCAATTGGA 59 25813021 25813039 GTGGTTATGGTGTTGCGAC 59 NA Drosophila melanogaster 61 Jon99Ci FBgn0003358 FBtr0085511 2 1 1 88 3R 25751669 25751687 CGGATCCATAATCGGACAC 57 25751542 25751560 TGACGGCACCATAGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Ice FBgn0019972 FBtr0085482 2 1 1 60 3R 25626088 25626107 AGCGATAGTGATTGCATCCT 59 25626129 25626148 CGTAGATGTAGCCCATCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18731 FBgn0042213 FBtr0085459 2 1 1 91 3R 25550882 25550967 ACTCGATACATCAGTTTCAAGG 58 25551019 25551037 TTTCCTCTACACTGGGAGC 58 NA InUTR Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 1 2 2 187 3R 25547146 25547374 AATGAGAGGCTCCCTTACC 58 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA Drosophila melanogaster 61 Obp99c FBgn0039682 FBtr0085463 2 1 1 73 3R 25512417 25512436 TATCTGATCGTAGCTCTGGC 58 25511894 25511912 ATCTCCTCACCAGTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 ppk21 FBgn0039675 FBtr0085448 1 1 1 88 3R 25492257 25492333 ACTACTAGCTAGCTTTGGTGG 59 25492382 25492401 CGATGGAGAAGTAGTAGGCC 59 NA Drosophila melanogaster 61 CG31041 FBgn0051041 FBtr0085470 1 1 1 155 3R 25416339 25416357 TGATCGACTCAAGCTACCG 59 25416065 25416083 TCTCCAGTTCCTTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11470 FBgn0039671 FBtr0085471 3 1 1 60 3R 25415252 25415270 ACTTTACGGCTTGCATCTC 58 25415210 25415230 GCATACTTCTCGCTGATATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11470 FBgn0039671 FBtr0085471 2 1 1 60 3R 25415252 25415271 AACTTTACGGCTTGCATCTC 59 25415211 25415231 CATACTTCTCGCTGATATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11951 FBgn0039656 FBtr0085403 2 1 1 80 3R 25063432 25063450 TACAAGATCAACTGGCGGG 59 25063308 25063390 GAGTAACGGAGATCCATCTCG 59 NA Drosophila melanogaster 61 Apc FBgn0015589 FBtr0085351 3 1 1 154 3R 24662201 24662281 CTTACTGAGTCAGGCTATTGC 58 24662067 24662085 CTGTCATCGCCGAATTCAG 59 NA Drosophila melanogaster 61 beat-VI FBgn0039584 FBtr0085289 2 1 1 82 3R 24287908 24289443 GTTATTGCTCAGTGCTCACTG 59 24289487 24289505 ACAATGTCGCTGCATTTCC 59 NA Drosophila melanogaster 61 beat-VI FBgn0039584 FBtr0085289 1 1 1 80 3R 24298131 24298372 CATCAACGGAAACCAGATCC 59 24298415 24298433 GAGGAGTACGTAGTGGAGC 59 NA Drosophila melanogaster 61 CG12426 FBgn0039552 FBtr0300050 2 1 1 87 3R 23697650 23697781 CGATCCAATTGCGATGACG 59 23697581 23697599 ATGATCGACCATGGACACC 59 NA Drosophila melanogaster 61 CG5646 FBgn0039525 FBtr0085210 3 1 1 111 3R 23386077 23386096 GTACCACAACATGTTCCTGG 58 23385926 23386006 GTCACTGTAATAAGTGGCTGTC 59 NA Drosophila melanogaster 61 CG5646 FBgn0039525 FBtr0085210 1 1 1 109 3R 23386077 23386096 GTACCACAACATGTTCCTGG 58 23385928 23386008 CACTGTAATAAGTGGCTGTCTG 59 NA Drosophila melanogaster 61 CG3348 FBgn0040609 FBtr0085172 1 1 1 171 3R 23117851 23117872 ACTAACGACCAAGAAATAGCAC 58 23117569 23117587 TAATTCCGGAACATGCGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31065 FBgn0051065 FBtr0113383 3 1 1 85 3R 22990627 22990702 CTTCTTGATTTCCCTTGGAGG 58 22990746 22990767 GCAGACAGATAACAATGGTCTC 59 NA Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 2 1 1 189 3R 22851700 22851788 CAATCTTTGCTCTAGCCGC 59 22851529 22851547 TAGAAGTTCACGGGAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17191 FBgn0039473 FBtr0085152 1 1 1 81 3R 22845347 22845419 TTGGCAACAGTAAGTGCTC 58 22845284 22845302 AACTGCCGTCTATCTGAGG 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544,FBtr0085000 3 2 6 143 3R 22082685 22082703 GAAGGAGAACATTGCTGCC 59 22082251 22082270 CAATACCTGTGGTCATCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544,FBtr0085000 1 2 6 60 3R 22082663 22082681 CAGAACGAGCTGCTTAAGC 59 22082312 22082332 CTGTATAGTTACCACAAGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34130 FBgn0083966 FBtr0110871 3 1 1 60 3R 22015411 22015435 CAAACTGTATGCATAGTCATAGGTC 59 22015375 22015393 GACGATACCAACTCCACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm3 FBgn0002609 FBtr0084958 3 1 1 60 3R 21848061 21848079 ATCAGATTACCCAGGTCCT 57 21848102 21848121 ATTATCTTGCGCCCAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14354 FBgn0039376 FBtr0084905 1 1 1 61 3R 21641703 21641778 GTTGGTTCACAGACAAATGTC 58 21641801 21641819 AACAGCGTTTGACATTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113353 3 1 5 157 3R 21149169 21153867 AAACTACATCCAACGGAGAG 57 21149031 21149049 TTAAAGTCCAGGGCACCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113353 1 1 5 159 3R 21149169 21153867 AAACTACATCCAACGGAGAG 57 21149029 21149047 AATTAAAGTCCAGGGCACC 57 NA Drosophila melanogaster 61 CG31099 FBgn0051099 FBtr0084856 1 1 1 84 3R 21135786 21135804 GTTCAAGTTCGACGACTCC 58 21135659 21135738 ATCAATGGCAGGAGATCCA 58 NA Drosophila melanogaster 61 CG11878 FBgn0039310 FBtr0084821 2 1 1 80 3R 21100627 21100705 GATTCTATGCCGTATTCTGTTCC 59 21100744 21100763 CCTGCTCAATAGAAGCATCC 58 NA Drosophila melanogaster 61 CG34110 FBgn0083946 FBtr0110797 3 1 1 81 3R 20995697 20995715 CGCCTGTCTAAACGATCTG 58 20995576 20995657 CTCGGAGGTTAAATCTTCATAGTG 59 NA Drosophila melanogaster 61 CG11820 FBgn0039270 FBtr0084765 1 1 1 62 3R 20891645 20891663 CTTGTGACCAAACAGTCGG 59 20891743 20891767 CTCGGCTATAATCTCTTCTATAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 1 2 2 80 3R 20691552 20691737 GTTACCAAAGTGCAGGTGC 59 20691781 20691799 GAACTCCCACCGGATACTG 59 NA Drosophila melanogaster 61 CG31105 FBgn0051105 FBtr0273357 3 1 1 80 3R 20683515 20683595 CTGGTTCGAAGTATTCAGTACC 58 20683456 20683476 AGTATCTCGAATATGGCCACC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100623,FBtr0100629,FBtr0100624,FBtr0301582,FBtr0100633,FBtr0084683,FBtr0100638,FBtr0100635,FBtr0084685,FBtr0084684,FBtr0100627,FBtr0100631,FBtr0100636,FBtr0301581,FBtr0100634,FBtr0100622,FBtr0100637 3 18 18 81 3R 20501026 20501360 GGCATTATACATCTGCTGGAG 58 20501403 20501421 AGACACAGGTCCAATACGA 58 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666,FBtr0084667 3 3 3 80 3R 20468077 20468149 TGAAGAATGCTACGAGTACG 57 20468016 20468035 ATAAAGCTGTAGTAGTGGCC 57 NA Drosophila melanogaster 61 Wsck FBgn0046685 FBtr0084669 2 1 1 86 3R 20454380 20454452 ATCAGTCTCGGATTGGTGAG 59 20454313 20454331 TAGGGATGTCACATGCTGG 59 NA Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 1 2 2 83 3R 20199862 20199880 GTGGACACGAAATGGACAG 58 20199732 20199815 TAGGCATAGTCCCACTTCG 58 NA Nonspecific Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324,FBtr0273323 1 2 2 80 3R 20175538 20175620 CCTTCTTTCACTCTCAGTGTG 58 20175661 20175680 CATTCACCACCAATTCCTCG 59 NA Drosophila melanogaster 61 Dms FBgn0011581 FBtr0084607 2 1 1 176 3R 20167395 20168560 CTCATCAGCATGTCCTTCG 58 20168700 20168718 TTGATCGGAGTTCTCCAGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5715 FBgn0039180 FBtr0084634 1 1 1 119 3R 20119722 20119740 TTACCAGCCAGGAATTGGG 59 20119565 20119583 ACTTTCCGCTACCAATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13611 FBgn0039177 FBtr0084600 3 1 1 84 3R 20105724 20105802 ACGATTCAATCTTCGTGAGC 58 20105847 20105867 CATGAAGTTCCTTGACTTGCT 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0084579,FBtr0084578,FBtr0100518,FBtr0100519,FBtr0100516,FBtr0100520 2 7 7 97 3R 19985255 19985383 ACTCTAGTCGATATGGAAAGC 57 19985029 19985047 ATAGGGTCCGTTATACGGG 58 NA Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084596,FBtr0084595 2 2 2 173 3R 19862532 19862663 AAGAACAGGAGCTCACATCC 59 19862378 19862396 TCTGTATCACGGCCTTCAC 59 NA Drosophila melanogaster 61 CG13601 FBgn0039126 FBtr0084522 1 1 1 80 3R 19753198 19753218 AACGTGATTAAGTCCAATGCC 59 19753083 19753156 CCAGTTGTAGAACTGTGCG 58 NA Drosophila melanogaster 61 CG10251 FBgn0043005 FBtr0113347 3 1 1 91 3R 19522867 19522953 TCTATTCTGATACCCAGTGCT 58 19522796 19522814 AATGCGGCATCGATTACTC 58 NA Drosophila melanogaster 61 CG33337 FBgn0053337 FBtr0084485 3 1 1 80 3R 19416874 19416962 TCGCAAATGATATGTGCCT 57 19416812 19416834 ATAGCAGGATAGGAGATATGAGG 58 NA Drosophila melanogaster 61 CG17083 FBgn0039070 FBtr0084383 1 1 1 60 3R 19112727 19112745 TCTCTACAACTCGGTGCTG 59 19112685 19112706 CTCGTCCATATTGCTAGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4624 FBgn0039058 FBtr0084401 3 1 1 81 3R 18984327 18984347 CAATCTATTGTCCTTCGAGGC 58 18984199 18984287 CTCCTTCGGTATGATATCACTG 58 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 3 3 3 103 3R 18878880 18878898 CGGAGGTCGATATCAAGGA 58 18878662 18878744 ATTCCCGGAGTTTAATCCCT 58 NA Drosophila melanogaster 61 CG4725 FBgn0039022 FBtr0084319 2 1 1 60 3R 18585948 18585968 ATTCGTTTCGAGTTTGAGCTG 59 18585908 18585928 CCTCTGGCTTCTGAATATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13842 FBgn0039009 FBtr0084331 1 1 1 80 3R 18532235 18532255 AGCAATATGTATCCTGCTCTG 57 18532122 18532193 AGCCACCAAAGATTGAACC 58 NA Drosophila melanogaster 61 CG33107 FBgn0053107 FBtr0084279 1 1 1 80 3R 18409762 18409780 CTATGGCCCTGCTACTCAC 59 18409642 18409721 CCTTGAGAGCATATTCCTTCTG 58 NA Drosophila melanogaster 61 CG33721 FBgn0053721 FBtr0091718 1 1 1 80 3R 18157288 18157373 CATAAATGTCCCTATGATCACGAC 59 18157410 18157430 AAGGATGTTGGTAAAGTGCTC 58 NA Drosophila melanogaster 61 DNApol-alpha180 FBgn0259113 FBtr0084115 2 1 1 80 3R 17496077 17496095 GATGGAAAGTCCGTCTGTC 58 17495950 17496036 GGGATCTAAGAGAAATTGTCGG 58 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 1 3 3 80 3R 17447412 17448545 TTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 CG5810 FBgn0038866 FBtr0084026 3 1 1 60 3R 16990040 16990059 CACATCTTCTCACAACTGGG 58 16990080 16990100 CCACTAGCTGATTACTGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 r-l FBgn0003257 FBtr0084038 2 1 1 107 3R 16898867 16898886 ATCAATGCCTTCAAGTTCGG 59 16898719 16898797 TACGGTTTGCATCACATCC 58 NA Drosophila melanogaster 61 CG12278 FBgn0038847 FBtr0084003 1 1 1 60 3R 16870030 16870048 GCATGATGAAGGCATTCCC 59 16870072 16870090 GTACTGGTCTACCACGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 2 3 3 114 3R 16837649 16837667 TACAGTCGACAAGCTGGTG 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 CG31200 FBgn0051200 FBtr0083929 2 1 1 80 3R 16570861 16570879 ATTGTACACCACCAACGAG 57 16570677 16570818 TACCGATTTCCCTGATCCTC 58 NA Drosophila melanogaster 61 CG31200 FBgn0051200 FBtr0083929 1 1 1 80 3R 16570861 16570879 ATTGTACACCACCAACGAG 57 16570677 16570817 TACCGATTTCCCTGATCCT 57 NA Drosophila melanogaster 61 GluRIIE FBgn0051201 FBtr0110837 1 1 1 80 3R 16473331 16473349 CCAAAGCCCTATACAGCCT 59 16473208 16473290 TGTTTAGATACTCGGCTGACTC 59 NA Drosophila melanogaster 61 CG31459 FBgn0051459 FBtr0083812 1 1 1 135 3R 15667084 15667102 TGACCTGATACATCGTCGG 59 15667201 15667283 GCAGCTCATCTGCATACTG 58 NA Drosophila melanogaster 61 CG7706 FBgn0038640 FBtr0083667 3 1 1 131 3R 14504815 14504891 GAGGATTTGCTGAAACAAGAG 57 14504984 14505002 ATCATCACCTTCAGCTTGC 58 NA Drosophila melanogaster 61 MED17 FBgn0038578 FBtr0083558 1 1 1 80 3R 14016702 14016722 GATTTCTTTCCCAGTCCACTG 59 14016764 14016845 TTTGTCGAACCTCACCTCC 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0100377,FBtr0300242,FBtr0083535,FBtr0083537 2 6 7 73 3R 13793540 13832664 ATGAGGAAGAGGTTCGCAC 59 13832701 13832719 TAACAAATAGAGCTCGCGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 TyrRII FBgn0038541 FBtr0083512 1 1 1 80 3R 13566759 13566777 CATTTGGATCTCGCTGGAC 58 13566821 13567441 GCGAGATACCTGTCCAGAC 59 NA Drosophila melanogaster 61 CG5265 FBgn0038486 FBtr0083407 1 1 1 60 3R 12966434 12966452 GTGGAGAACTGCCTACCTG 59 12966474 12966494 GCGTGGACTTTACATATCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Irc FBgn0038465 FBtr0083371 3 1 1 80 3R 12830510 12830595 ACGGTTTCTATCAGATGTTTCC 58 12830632 12830654 CATACAGCTCCTTACTAATGGAC 58 NA Drosophila melanogaster 61 Irc FBgn0038465 FBtr0083371 1 1 1 80 3R 12832216 12832310 CCAGTGATGTCTTGGATAAGC 58 12832352 12832370 TCTCCGAAATACCACCCAC 59 NA Drosophila melanogaster 61 Glut3 FBgn0015230 FBtr0083340 2 1 1 60 3R 12614802 12614820 TCTCTGAGATTTCTGCGTG 57 12614842 12614862 GTGTTAGAAAGTCGATCTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 1 1 1 63 3R 12307853 12307871 CAAGTGCAATCCCATGGAG 58 12307752 12307826 GATTGTGGACGCATATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14882 FBgn0038429 FBtr0083289 2 1 1 128 3R 12268987 12269006 GCGAATTGGTAAATACGGGA 58 12269097 12269165 ATGTTTCGGTGGGTCTCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 2 2 2 95 3R 12006909 12010689 CTAATTGCGCTCGTTTGCA 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 blp FBgn0038387 FBtr0083203 2 1 1 163 3R 11759646 11759731 ATTTACCTGAAGGACGCCT 58 11759855 11759876 CATGACGGTTTCTTGTATTCCT 58 NA InUTR Drosophila melanogaster 61 CG34275 FBgn0085304 FBtr0112470 1 1 1 150 3R 11738553 11738571 CTTTGTCAAGGAGACGTCG 58 11738149 11738439 CTGCTTCTCCAGATTGGTG 58 NA Nonspecific Drosophila melanogaster 61 ND23 FBgn0017567 FBtr0083191 1 1 1 102 3R 11661999 11662085 TTCTGTCAGGAAGCCTGTC 59 11661915 11661936 GAAGCTTCTCCTTGTTGTACAG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963,FBtr0089962,FBtr0089961,FBtr0089965 2 4 13 104 3R 11115110 11115128 CAACATCATCCGCAACGAG 59 11120869 11120887 TCTTCTTCGAGCAACTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0302146,FBtr0083033,FBtr0302142,FBtr0083030,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 10 10 89 3R 11004007 11004025 ACGATCATCACTACAGCCG 59 11001999 11002088 CATAGCGAGATGGGTACCTG 59 NA Drosophila melanogaster 61 VhaPPA1-1 FBgn0028662 FBtr0083005 3 1 1 91 3R 10729735 10729754 GTACGTCATGTGATTGTGGA 58 10729604 10729681 TGTTCACTGTCGAATTGCA 58 NA InUTR Drosophila melanogaster 61 RpS5b FBgn0038277 FBtr0083006 1 1 1 95 3R 10726408 10726684 TGTCAACCAGGCAATTTGG 59 10726331 10726349 ATCAGCTCATCAGCCAGAC 59 NA Nonspecific Drosophila melanogaster 61 CG31313 FBgn0051313 FBtr0082982 2 1 1 82 3R 10392722 10392901 TGGTCCCAATTATCAGGTAGTG 59 10392661 10392682 GCTTCACCTCGAATTTGTAGAG 59 NA Drosophila melanogaster 61 CG14852 FBgn0038242 FBtr0082957 2 1 1 90 3R 10391760 10391778 CACAACGCCTACTGATGGA 59 10391832 10391850 CGTGTTGCTTCCATCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0301081 2 1 2 85 3R 10246555 10246573 ACTTATTGTGGATGAGCCC 57 10246622 10246706 CCTTGCTCATGTCTTCTCC 57 NA Drosophila melanogaster 61 CG34309 FBgn0259831 FBtr0112505 1 1 1 91 3R 9198426 9198446 TTAAGACATCGGGATTGTGTC 58 9198608 9198626 CAGATGTCCAGGTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CheA87a FBgn0038142 FBtr0082749 2 1 1 98 3R 9195610 9195684 AATGATTGGACGGTTGTGC 59 9195745 9195764 CATAAAGTCGCAAAGCTGCA 59 NA Drosophila melanogaster 61 CG8773 FBgn0038135 FBtr0290037 1 1 1 80 3R 9123169 9123247 GAGGATCATTTGGATAACCGC 59 9123288 9123307 TTCAGTGAGACAGGATTCCA 58 NA Drosophila melanogaster 61 Hsc70-2 FBgn0001217 FBtr0082707 3 1 1 134 3R 8870798 8870816 ATGTGGCATTCAACGAGAC 58 8871369 8871388 CCTCCTGTATCTTCTTGTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 2 2 3 80 3R 8855688 8855708 CGACAACACTTTCTACGACAG 59 8854594 8855648 CTGATAAGGCTCTCATTGCAC 59 NA Drosophila melanogaster 61 yellow-f FBgn0041710 FBtr0082723 3 1 1 80 3R 8818232 8818252 TAGAACCTCAGTGGATGTCTG 59 8818106 8818190 ATCTGCTGGCGATTATTGG 58 NA Drosophila melanogaster 61 mbo FBgn0026207 FBtr0082668 1 1 1 60 3R 8502833 8502855 GGAGGTGATTCGACTTAATAAGG 58 8502795 8502813 CTTAGCAGTCTCCAGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 3 2 2 81 3R 8380452 8380470 ATTTGTGGAACAGCCTCGA 59 8380316 8380413 GCATAGTATCTATCCACAGATATGC 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 1 2 3 154 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213638 8213709 CGAGAAGACTTCCTTCAGCT 59 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 3 1 1 109 3R 8049058 8049163 TTCCGCAAGGTTATGTTGC 59 8049236 8049254 TCCTTTGCTGTATCCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14717 FBgn0037938 FBtr0082425 2 1 1 60 3R 7522842 7522860 CAGGTGTTCGAGATGATGC 58 7522881 7522902 CGGAAAGTGATAGATTTGAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL40 FBgn0037892 FBtr0082384 2 1 1 130 3R 7233731 7233813 TTTGCCAGATTGAGTCTGC 58 7233907 7233925 TTGACAATCTGCGGATCCA 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 3 5 5 127 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048082 7048293 CTTGTTGATCTTGGAGCCA 57 NA Drosophila melanogaster 61 CheA86a FBgn0261291 FBtr0091686 1 1 1 80 3R 6970746 6970831 GGAATACCCAAGTTATTGTTGC 58 6970687 6970706 TTTGGAGTTCTCTTCACTGG 57 NA Drosophila melanogaster 61 CG6629 FBgn0037860 FBtr0082380 3 1 1 129 3R 6941245 6941317 GAACACTTGTCGCTCATTGG 59 6941135 6941156 ACTAGCCTTATGATCCTTTGGG 59 NA Drosophila melanogaster 61 CG6574 FBgn0037846 FBtr0082297 2 1 1 80 3R 6687490 6687511 TTCCCAACTTATGCTCAATCTG 58 6687373 6687451 ATGGCTATAATCTGAGTGCCC 59 NA Drosophila melanogaster 61 CG14692 FBgn0037836 FBtr0302798 3 1 1 80 3R 6621448 6621468 CTGAAGCTCTGTTCGATTCAG 59 6621323 6621406 TGTCCAGAGACTGTACGAG 58 NA Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 3 2 2 127 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175612 6175631 TTATTCGGCTTGATGTTCGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG33631 FBgn0053631 FBtr0091608 1 1 1 80 3R 5889821 5889892 GGACAATGAAGTTCAGAAACC 57 5889931 5889952 GATAAAGCCTTCATAAAGCGAG 57 NA Drosophila melanogaster 61 CG8516 FBgn0037757 FBtr0082141 2 1 1 96 3R 5620328 5620400 ACTCGTCGAAGGGATACAC 58 5620460 5620478 GTAGGGTTCCTGTTCGAGG 59 NA Drosophila melanogaster 61 trbd FBgn0037734 FBtr0082091 1 1 1 81 3R 5535041 5535122 AGGACATCTTCCGTCTGAG 58 5534978 5534997 GACATTACGGCTACTTCGAC 58 NA Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 2 1 1 211 3R 4834627 4834703 GATAGCTGCGGTACGTAGG 59 4834878 4834896 TTCTACGCAGCTCATAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11970 FBgn0027503 FBtr0081959 3 1 1 116 3R 4814693 4814785 GATCATTGTGGGCAATACGG 59 4814864 4814882 GTTGCTTTGGTTACCGAGC 59 NA Drosophila melanogaster 61 CG11970 FBgn0027503 FBtr0081959 1 1 1 81 3R 4812014 4812221 TAGAACAACCGGAAAGTCCC 59 4812265 4812283 CTTCCGACAAACTGTGCTC 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 1 2 4 129 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607992 4608010 TGCTTTGGAGACTCACCTC 59 NA Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0081943 3 1 2 98 3R 4593507 4593851 GTTCCAAGTGAATGAATGGG 57 4593428 4593447 GGCTCTCGGCTTTATATCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0302178,FBtr0300896 3 2 2 60 3R 4046584 4046602 TACCCAATCTTCGACTGCT 58 4046626 4046644 TTTAGCGTCATCACCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 3 4 4 92 3R 3848737 3848755 TAATTGCCCGGATCTCCTG 59 3848602 3848681 ACAGATGCCAAGTTGACCA 59 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 1 2 2 80 3R 3745624 3745645 CTCTGGTGAAATTAACAACTGG 57 3745505 3745586 CTTTCATTGTCGGCATATTCAC 58 NA Drosophila melanogaster 61 CG2943 FBgn0037530 FBtr0081765 3 1 1 81 3R 3730570 3730589 AAGGGCATTCTGTTACTGGA 59 3730448 3730526 GATACATGCCATCAGCCAG 58 NA Drosophila melanogaster 61 dj FBgn0019828 FBtr0089741 1 1 2 60 3R 2885194 2885293 CCTTGAGAACTTTAAGGAAGGG 58 2885313 2885332 TGCGGATCGTGAATAGAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 2 1 2 73 3R 2569652 2569737 GATGTATCCTTGCGTCGAG 58 2569597 2569617 TCTTTGATTTCTCCGAAGACC 58 NA DesignNoJunction Drosophila melanogaster 61 agt FBgn0024912 FBtr0081697 1 1 1 60 3R 2485499 2485517 ATCCGAACTCTGGAAGGAC 58 2485457 2485476 GCTTTCGAACAGTTTATCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604,FBtr0078603 2 2 2 60 3R 2113756 2113774 GGTGGAGATCCGAGAAAGG 59 2113796 2113816 GTAGGCGTAGAAATTGACAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi1 FBgn0037406 FBtr0078588 1 1 1 80 3R 1999688 1999707 CTGAGATTAGTCCAGTTGGG 57 1999749 1999969 TTCACTGTCACCTTCTAAGC 57 NA Drosophila melanogaster 61 CG31555 FBgn0051555 FBtr0078633 2 1 1 60 3R 1637337 1637360 ACTGTGAATTCGAGTATAGTACCC 59 1637378 1637397 TGTACCACCTGGTTTGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1236 FBgn0037370 FBtr0078721 3 1 1 82 3R 1562590 1562609 ACAAGGTGTACGTAACCAGG 59 1562730 1562748 ATGCCAGGTACTCACTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078680 2 1 2 164 3R 1293861 1293932 TATCCGACCAAACTGGCTG 59 1294060 1294078 AATCTTGCCAGGATTGTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1113 FBgn0037304 FBtr0078779 1 1 1 80 3R 1080571 1080589 TATCATGATCCTCGTCCGC 59 1080633 1080705 GTGGGATTCGTTCAAGGAC 58 NA Drosophila melanogaster 61 atms FBgn0010750 FBtr0078868 1 1 1 97 3R 602438 602456 ACGGCATCTACTACAACGA 58 602517 602594 CTTGACAACCAGCTTGGTG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078940,FBtr0078939 1 2 4 271 3R 278929 278947 CTGCCGAGTACTACCACTG 59 273439 273458 GTATCTGCTTATGCTGTCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TwdlV FBgn0037227 FBtr0078976 1 1 1 124 3R 80507 80586 TGGATTCATTGTCCTATGCCT 59 80672 80690 CTTGGAAGAAGGAGCCTCC 59 NA Drosophila melanogaster 61 CR42548 FBgn0260721 FBtr0301175 1 1 1 65 3L 17878562 17878580 TTGGTGACCCTTATCAGGG 58 17878477 17878495 GTTCATGTAGCCAGCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 tRNA:CR32329 FBgn0052329 FBtr0072684 1 1 1 60 3L 1380537 1380558 TGTCTAGTGGTTAGGATATCCG 58 1380579 1380597 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148,FBtr0078565 2 2 2 80 3L 23006393 23006875 CTCAAGTTGAATGGTATCGC 57 23006917 23006936 CATTCTCCGAATTACCACCT 57 NA Drosophila melanogaster 61 CG11367 FBgn0037185 FBtr0078528 3 1 1 80 3L 22725772 22725791 TAAGGTCCATGCATGAAGTG 58 22725833 22726029 CGCAAATTACCTCAAACAGG 57 NA Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524 2 1 2 102 3L 22710940 22710958 TATCAACTCTGACTCCGGC 58 22711110 22711128 GTCTCCGATATCCCGTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7458 FBgn0037144 FBtr0078475 2 1 1 80 3L 21948944 21949484 GACCATATCAACGGAGTTTGG 59 21949524 21949544 TGGCCCACATTGTTTATAGTG 58 NA Drosophila melanogaster 61 CG33291 FBgn0053291 FBtr0078427 2 1 1 86 3L 21658365 21658494 CGTGACCTTCAGAGTGGAG 59 21658544 21658562 CTCAGCATGCTTTGGAAGC 59 NA Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078383 2 1 2 85 3L 21526718 21526736 GAAACTGTGAGTGCTGTGG 59 21526271 21526669 GTCTGGACCTGATGACCTG 59 NA InUTR Drosophila melanogaster 61 sa FBgn0002842 FBtr0078401 3 1 1 80 3L 21399730 21399748 GCATCCAAGAACTGTGAGG 58 21399605 21399686 AATCTCACGGAATTTGCCA 57 NA Drosophila melanogaster 61 rgn FBgn0261258 FBtr0078346 1 1 1 194 3L 21404665 21412711 GTCTTAACCAATAGCCCGT 57 21412866 21412887 GATAAATACTTGACAGCACCAC 57 NA InUTR Drosophila melanogaster 61 CG32437 FBgn0052437 FBtr0078344 2 1 1 60 3L 21351639 21351660 GCTCACATCACATTATCACGAC 59 21351679 21351699 TTTCCTCCGTTGATATTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp77F FBgn0259972 FBtr0300317 2 1 1 81 3L 20890466 20890487 CGTGTTAATTTGCTTACTAGCG 58 20890349 20890426 GGTTTCCTCACAAAGAAGTGG 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 1 2 4 70 3L 20764900 20764918 ATGGTCAATTCGTCTGGCA 59 20764952 20765710 TTTGGCCTGTGATAGTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32228 FBgn0052228 FBtr0074836 2 1 1 60 3L 20259458 20259479 CTGCTAATTCAACCGCTAAGAC 59 20259499 20259518 GAATCCGAAAGCTCATTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074853 1 1 3 116 3L 20212750 20213452 GATGCAAGCAATCAATATGAGG 58 20212655 20212673 ATGTATCCATAGCCCGACC 58 NA InUTR Drosophila melanogaster 61 Ir76b FBgn0036937 FBtr0074869 1 1 1 80 3L 20103998 20104087 GTAAACAGCAGTACGGTGG 58 20103936 20103955 TGTGGAGTAGTAGACGAAGC 59 NA Drosophila melanogaster 61 Cyp305a1 FBgn0036910 FBtr0074925 2 1 1 119 3L 19806258 19806278 GCGATTCTAATTGGTTTCGTG 58 19805023 19805279 TTCCTTACGGAACTGTAATGTG 58 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074943 1 1 3 236 3L 19594871 19594889 AGATGCATGCCAGATTTGC 59 19595154 19595172 GCGTATACTTACTCGGTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32213 FBgn0052213 FBtr0273409 3 1 1 88 3L 19468994 19469071 TCAAATACGCTGTCGTCGT 59 19469123 19469141 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 rept FBgn0040075 FBtr0074988 3 1 1 60 3L 19249101 19249120 GAGATGGAAACCAACTACGA 57 19249140 19249161 TCTTCTCTTTCATGAAGCACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nkd FBgn0002945 FBtr0075039 3 1 1 111 3L 19001347 19003705 TCCGACTGGAGGAATTCAC 59 19001254 19001272 GTTATCTTGCCGTGATGCC 59 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 1 3 3 80 3L 18872548 18872619 AGCTTAAAGAGCTGCATTATCG 59 18872489 18872507 GCGTACATTGTTCTCCGTG 59 NA Drosophila melanogaster 61 CG14074 FBgn0036818 FBtr0075061 2 1 1 60 3L 18860060 18860079 TCCTCCTCTCCTATAAGCGA 59 18860102 18860120 ATTTGTCCACCTCTTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nufip FBgn0036812 FBtr0075088 3 1 1 197 3L 18741152 18741230 TGCACCAAGAACAAAGCAG 59 18740973 18740991 GACGTTCCAGGATGTTGTG 58 NA Drosophila melanogaster 61 term FBgn0003683 FBtr0075112 3 1 1 157 3L 18586659 18586678 TTTACCAACGAGGAGACCAC 59 18586521 18586539 GTAAGATGCAAGCCCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7603 FBgn0036726 FBtr0075220 1 1 1 95 3L 17459229 17459311 GTTCTAGGATTTCTAGTGCGC 59 17459368 17459386 CTTGTCCGTCTGGTCAGAG 59 NA Drosophila melanogaster 61 CG33051 FBgn0053051 FBtr0075230 1 1 1 93 3L 17419946 17420033 CCCTAGAAACAACAGCCAC 58 17419871 17419890 GCGGAGATCATGTAATAGGG 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 2 10 12 134 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 3 2 2 91 3L 16710866 16710884 AGTTGGATGGCCTCTTTCC 59 16710938 16711138 GTTCTGTTGCGGATTTCCTG 59 NA Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364,FBtr0100244 2 2 2 127 3L 16583552 16583570 GTCAACATAGCCGAAGTCG 58 16583386 16583463 AGACATCCCGTAGAAATCCTG 59 NA Drosophila melanogaster 61 CG4229 FBgn0036639 FBtr0075392 1 1 1 75 3L 16549958 16549976 AGACGCAAATCGTAAACCC 58 16550202 16550220 GAGAGGGTAAGGACACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653,FBtr0300654 3 2 2 80 3L 16511240 16511322 TTGTCTATGCCTTCCTGCT 58 16511178 16511196 GAATGACGTAGGACACGAG 57 NA Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 2 3 4 80 3L 16377075 16377096 TTTATCAAGCCCATAGACAAGC 58 16376956 16377038 GAAGATAAGTTGGGAGTAAAGCG 59 NA Drosophila melanogaster 61 CG4933 FBgn0036615 FBtr0075381 3 1 1 101 3L 16346006 16346084 CTCAAATGAGGTCCTTATAGTTGG 59 16346144 16346162 GTGGCAAAGAGTTTGCCTC 59 NA Drosophila melanogaster 61 CG13041 FBgn0036605 FBtr0075432 2 1 1 60 3L 16312473 16312552 AATTTGTTGCTGTCATCGCT 59 16312432 16312450 TGAGTCTCGATGAGACCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Nplp3 FBgn0042201 FBtr0075369 1 1 1 199 3L 16311157 16311304 AATGTTCAAGCTGTGCGTC 59 16311467 16311485 CAGCATGAGAAATGGCACC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 3 2 2 104 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274835 16274853 ATGGAAAGGAAGGAGACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13051 FBgn0040799 FBtr0112771 2 1 1 193 3L 16258123 16258141 ATCTTCGCTCTGTTTGCCT 59 16257948 16257966 GCATAGGGAGCAGTGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33689 FBgn0053689 FBtr0091669 1 1 1 117 3L 16193702 16193720 TCGATGGATGCAAGTTCCT 59 16193801 16193872 ACAATGATGTCGTGGTCGT 59 NA Drosophila melanogaster 61 Eig71Eg FBgn0004594 FBtr0075573 1 1 1 80 3L 15650981 15651001 CATATTGCGGACGAAATAACC 57 15651041 15651117 CCATAGTTACTATGCACGAGG 58 NA Drosophila melanogaster 61 Eig71Ee FBgn0004592 FBtr0075585 1 1 1 80 3L 15649000 15649072 GGTCTGCTTAGTGGTAAGCT 59 15648939 15648959 AACGCTTTCTCAATTACCTCC 58 NA Drosophila melanogaster 61 CG6945 FBgn0036476 FBtr0075657 2 1 1 129 3L 15086420 15087361 AAGGTCTTCGTTCGGATCC 59 15086309 15086330 TCTTCATCTTTAAGACTGGCCA 59 NA InUTR Drosophila melanogaster 61 Tom FBgn0026320 FBtr0075620 2 1 1 62 3L 14962615 14962633 TGAGGAAACTGGTCAAACC 57 14962659 14962677 GAGTCTTCCGGAGTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 D FBgn0000411 FBtr0075746 2 1 1 60 3L 14171688 14171708 ATTATTCGATTGCCCTTGTCC 58 14171572 14171590 CATGTAGAACGGTCCTCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17362 FBgn0036393 FBtr0075764 1 1 1 60 3L 13979915 13979934 CTAGTGATAGCTCCACTGAC 57 13979957 13979975 TCATAGGAATCGACGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075762 1 1 3 146 3L 13967868 13969027 GATCTTTGATGCCAAGCGG 59 13969137 13969155 TAGAAGCTCTTCCGTTCGC 59 NA Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075816 2 1 2 80 3L 13631655 13657529 AACAAGTTACTATGAACCGTGC 59 13577351 13577370 CAAATTTGACGAAAGCGCAG 59 NA Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 1 2 2 80 3L 13507891 13507970 GACAATTGCCGAAAGTGGT 59 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 CG14106 FBgn0260459 FBtr0075858 1 1 1 60 3L 13417770 13417790 TGTGTTGGACTACGATCTCAG 59 13417730 13417750 TGACTCTGGCTTCAAATACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp70A4 FBgn0259970 FBtr0300316 2 1 1 60 3L 13289865 13289886 GAGAGGTTGAAATTTGGATACG 57 13289826 13289847 GAACAATATCTGGTTCCTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11251 FBgn0036346 FBtr0075891 1 1 1 60 3L 13082077 13082097 TTCCTTATTCACCGCCTATCC 59 13082037 13082056 CCGTTAGTATAATGTCGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34032 FBgn0054032 FBtr0100087 1 1 1 80 3L 12883560 12883646 AGTGCCAATCAGATCAGCT 59 12883690 12883708 TGATGATGCTGTTTCGGGT 59 NA Drosophila melanogaster 61 CG32102 FBgn0052102 FBtr0075978 3 1 1 214 3L 12462863 12462883 GTGAGACATCTCATTATCGCC 58 12462500 12462521 CGAAACTGCAACTAAACTACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 3 1 1 99 3L 12130191 12130278 ATTTGTATCCTTCTGAACGCC 58 12130339 12130357 TGAACGTCTGTATCCAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33269 FBgn0053269 FBtr0076148 1 1 1 60 3L 11575194 11575213 AAATACCTGTTCGTGGTTGC 59 11575153 11575173 TACTAGAAGATGAAGCCACCT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6168 FBgn0036154 FBtr0076182 2 1 1 60 3L 11313885 11313905 GGATGTAGAGATGAACGTGGA 59 11313845 11313864 CATTCGCAGAACTAGACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696,FBtr0302700,FBtr0302698 3 5 5 84 3L 11216595 11216614 CAACTACTACCACGAAACGC 59 11216661 11216817 ATCCAGATAGGCACCTGTG 58 NA Drosophila melanogaster 61 CG14141 FBgn0036146 FBtr0076164 2 1 1 82 3L 11194699 11194717 AATATCGCGATCCGGAGTC 59 11194816 11194834 CTCAAGATCGAAGTGCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7607 FBgn0036145 FBtr0076163 1 1 1 80 3L 11193288 11193365 GATTCTTTCAGGTACACGAATCTC 59 11193403 11193422 CCATTTGAGTGGTTGGATCG 59 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 3 3 3 87 3L 11171621 11171757 GTGCAGAGATATTCTCACGTG 59 11171554 11171572 GTTCGTGTTCTTGTAGCGC 59 NA Drosophila melanogaster 61 CG32075 FBgn0052075 FBtr0076240 3 1 1 90 3L 11056498 11056576 GCCGAACTGGATTTGAACG 59 11056426 11056445 CTAACAGACTGCGCATTGTC 59 NA Drosophila melanogaster 61 CG42521 FBgn0260396 FBtr0300668 2 1 1 90 3L 10616546 10616618 TTACACAAAGGCCAAGCTG 58 10616474 10616494 TAGCAAAGGAGCTTACATGTC 58 NA Drosophila melanogaster 61 CG16717 FBgn0036028 FBtr0076392 2 1 1 107 3L 9672497 9672515 AACAATCAGAAGTCGGCGA 59 9673018 9673037 CTGGCTAAGTGGATGTACTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 phol FBgn0035997 FBtr0076475 1 1 1 219 3L 9448849 9448867 AGTTCAGTGCAGCAATACC 58 9448553 9448571 TAGATTCTTCACGATGGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Bet3 FBgn0260859 FBtr0089879 3 1 1 170 3L 9432391 9432409 CTCCGATGAGTTCTCCCTG 59 9432141 9432257 TTCAGTTGATCCTGCACGA 59 NA Drosophila melanogaster 61 CG4461 FBgn0035982 FBtr0076452 2 1 1 60 3L 9369011 9369029 TGAGGAAGTACCTTCTGCC 58 9369051 9369071 CTGGATATGTCCGAGATTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5978 FBgn0035916 FBtr0076648 3 1 1 182 3L 8616640 8616716 CATTTAATGGTGTGCCCGA 58 8616476 8616495 CTACGCTAGCTCTATTGCTC 57 NA Drosophila melanogaster 61 DNApol-alpha50 FBgn0011762 FBtr0076603 3 1 1 80 3L 8336226 8336300 ATGGATCATCCGAGGATGC 59 8336338 8336362 AGAGGTAACGTATGTAGATATCGTC 59 NA Drosophila melanogaster 61 CG8546 FBgn0035785 FBtr0273394 1 1 1 80 3L 7450152 7450231 GAGCGGAAGGTATTATTCCC 58 7450272 7450292 TATAACCATCCTCCACATTCC 57 NA Drosophila melanogaster 61 Srp19 FBgn0015298 FBtr0076879 1 1 1 116 3L 7340875 7340965 TATGGAGCGATGGATTTGC 58 7340777 7340797 CGAATCTCAATATAGCTGGGA 57 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 1 2 2 62 3L 6940962 6940980 AAAGCGCCTGATCTATGGT 59 6941006 6941094 CATTTGATGCCAGTTGCAC 58 NA DesignRelaxed Drosophila melanogaster 61 zpg FBgn0024177 FBtr0076983 3 1 1 116 3L 6598818 6598837 AGGATATGGACTACGTGCAC 59 6598665 6598739 TACTAACCGCATCTGGTCG 59 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077075 3 1 3 137 3L 5925731 5925749 AAGCGACCCTGAAATTGGA 59 5925552 5925630 CTAGATGGTGTTGCTGGGT 59 NA InUTR Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 3 2 2 80 3L 5556487 5556602 CGTTCATAAGGTTCCCGTG 58 5556425 5556444 ATGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 Aats-leu FBgn0027085 FBtr0073348 2 1 1 84 3L 4826035 4826109 GGAATGATAATCCAGAGCTAACC 59 4826152 4826171 TTGAACTGTCCTCCACTGAG 59 NA Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 2 2 2 94 3L 4402148 4402235 GCATGAAACCTATTTGCTCC 57 4402292 4402310 GAAACGTCCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG11583 FBgn0035524 FBtr0073242 1 1 1 125 3L 4282619 4282637 ATCGTCAGATGATGTGGTG 57 4282451 4282472 GGCATTAGGGTCTTAATATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG14990 FBgn0035496 FBtr0073208 3 1 1 60 3L 4093274 4093294 GGTTTCGTTTCTTTGTAGTGC 58 4093314 4093400 GTTGAATATTCCAGGTGCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10853 FBgn0035478 FBtr0073164 2 1 1 108 3L 3947989 3948065 GTCACAATAATCCCTGGGAG 57 3948134 3948154 CCTTCTTTGGGATAAACAGGA 57 NA Drosophila melanogaster 61 CG10866 FBgn0035475 FBtr0073173 3 1 1 134 3L 3937384 3937461 TATTTGGAGGATGCCACCA 58 3937268 3937286 TAGGGATCCCAGCATTAGG 57 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073145 3 1 2 106 3L 3404912 3424433 CCTTCACCGAAAGCAATCG 59 3404824 3404842 ATCCGAGATCCTCAATGCC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 dro5 FBgn0035434 FBtr0073062 3 1 1 90 3L 3316847 3316865 TTCCTGTACCTCTTCCTGG 58 3316918 3316937 GTCCTCCGTATCTTCCAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 3 3 3 80 3L 3227695 3227783 TACTTCTCCAGGGAGAACCT 59 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107,FBtr0073106 2 2 2 61 3L 3198771 3198790 AAATATGTGACAATGCGTGG 57 3198409 3198428 GGATATTGACCCTCTTTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG14963 FBgn0035409 FBtr0073111 1 1 1 60 3L 3172134 3172154 AGTCTATTGAACCAGTTTCCC 57 3172094 3172112 TTAGAAATCCTTGCCAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14962 FBgn0035407 FBtr0073112 1 1 1 80 3L 3166192 3166213 ACCTTCTTATCGAATTGATGCG 59 3166043 3166151 AAACGCTGCATACGTACAC 59 NA InUTR Drosophila melanogaster 61 scramb2 FBgn0035390 FBtr0073005 2 1 1 148 3L 3045121 3045731 AACTTCAAGGTATTGAGCGC 59 3044992 3045010 AATATGAGCGCCTTCATGC 58 NA Drosophila melanogaster 61 CG12093 FBgn0035372 FBtr0073015 1 1 1 85 3L 2773294 2773406 ATGGCAAGAGCAATCTTGC 59 2773227 2773247 GCTGTGATTACTACTGATGCA 58 NA Drosophila melanogaster 61 Cyp4d20 FBgn0035344 FBtr0072967 2 1 1 81 3L 2478195 2478213 GATCCCAGGTCCCATTTCC 59 2478063 2478152 CCATCCGATAATGTTCTCTGC 59 NA Drosophila melanogaster 61 CG9004 FBgn0035336 FBtr0072890 1 1 1 80 3L 2374604 2374626 ATGATGAAGACCTAACTGGAGAG 60 2374660 2374737 CCTCTTTAATCTTAGGTGCATTCTC 60 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 1 2 2 99 3L 1825127 1825145 CTGTCTGCTGCATATTGCG 59 1824696 1825064 GTAGTGGAGCCTTTCCTCG 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072808 1 1 5 188 3L 1664014 1664101 CTAGTCTTAAAGACGCACCC 58 1661518 1661536 GATATGTTGAAGGCCTCGC 58 NA InUTR Drosophila melanogaster 61 CG12104 FBgn0035238 FBtr0072825 1 1 1 111 3L 1602544 1602562 TTCCACACTCCCTCATTCG 59 1601900 1601918 ACATGGATTGATCCAGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG3344 FBgn0035154 FBtr0072609 3 1 1 87 3L 686635 686655 ACTTCTATAACGTGGAGACCC 59 686515 686586 CGATACATGACCTCCTCCG 59 NA Drosophila melanogaster 61 MED30 FBgn0035149 FBtr0072558 3 1 1 60 3L 653150 653171 GAACCATGAACTCATAGAGACC 58 653111 653129 ATCGATGATCTCGCGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-A1597 FBgn0086029 FBtr0114305 2 1 1 60 2R 20138844 20138864 CGGACAATTGCGAATTAACTG 58 20138885 20138904 ATCAGTCACATCACCTTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3378 FBgn0082963 FBtr0113518 2 1 1 61 2R 17217233 17217251 GCTAAACTAGCATGGCGAC 59 17217276 17217294 GTATGCGGCATTATAGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3316a FBgn0082972 FBtr0113516 2 1 1 60 2R 17214315 17214334 GCTCAGTTGCAAGTGATACG 59 17214355 17214375 ACTTGTAGTCAGCGTTATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347b FBgn0083053 FBtr0113514 2 1 1 76 2R 14030550 14030572 CGACTAAGATTCATAGTTGCCAG 59 14030607 14030626 TGTTATGCAGATGGTATGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir48a FBgn0053471 FBtr0088081 2 1 1 60 2R 7586959 7586979 GTGAGAACAGTGTCTTCAGAG 58 7586919 7586940 ATAGACGAACATATCCATGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33355 FBgn0053355 FBtr0086347 1 1 1 60 2R 15653008 15653026 ATACATCGGTTCTCGTCCG 59 15652966 15652984 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Peb FBgn0004181 FBtr0072454 2 1 1 133 2R 21064124 21064208 GACAATTGATACTCGTCCTTTCTC 59 21064014 21064032 TAAGTAACGTAGAGGCGCC 59 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 2 4 4 81 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552191 20552386 GCATAAACTCATTATTGGCCTG 58 NA Drosophila melanogaster 61 CG3640 FBgn0035042 FBtr0072322 3 1 1 131 2R 20527283 20527301 ACTCCTGGGATTATTGCCA 58 20527471 20527489 CCTGCAACTGATTGCTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312,FBtr0072313 2 3 3 117 2R 20479589 20479609 TGCTGATCACCATTAAAGACG 58 20479687 20479764 ACATGATCTCTGTACTCGCT 58 NA Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072368 3 1 2 83 2R 20270762 20270781 GGAGCCTTCTGATTTAGGGT 59 20269365 20270716 TTCATCGAGGTGCATCTGG 59 NA Drosophila melanogaster 61 enok FBgn0034975 FBtr0072250 3 1 1 160 2R 19988119 19988137 TCTGGGATTGCCAGAACTG 59 19988259 19988338 GCATGTCTTACACCTGTATGG 58 NA Drosophila melanogaster 61 RpL39 FBgn0023170 FBtr0072185 2 1 1 83 2R 19949773 19949791 CTGGCTAAGAAGCTGAAGC 58 19949503 19949729 CTTAGCGTTGTAACGAATAGTG 57 NA Drosophila melanogaster 61 Fmo-1 FBgn0034943 FBtr0072150 1 1 1 80 2R 19850762 19850839 GAACCTACGAACCAACCTG 58 19850883 19850901 CTCACATAGGAAGCCTCGT 58 NA Drosophila melanogaster 61 thoc5 FBgn0034939 FBtr0072147 3 1 1 83 2R 19843447 19843468 GGAAATGCCTCTATGGATTCTG 59 19843511 19843586 AACTCCATCATCTTGATCGC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 CG5532 FBgn0034902 FBtr0072091 1 1 1 210 2R 19640407 19640425 ATCATGGGATACGCCAAGG 59 19640658 19640676 ATAGCATGCACACCATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072097 1 1 3 148 2R 19588106 19588334 GAACTTGGAAGTCATGGCG 59 19587976 19587994 TGTAGAGGTTGTCCAGCAG 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 84 2R 19484451 19484469 TTTATGAAGATTGCCGCCA 57 19484516 19484597 TGTACTGTGTCATTTCCGTC 58 NA Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 3 2 2 100 2R 19245611 19245629 CCAGAAGACTCTGGACCAC 59 19245693 19245772 CGTCTGCAGTCTTGTTCAG 58 NA Drosophila melanogaster 61 CG30272 FBgn0050272 FBtr0071890 3 1 1 80 2R 18717726 18717745 AGTTTAATGCTGGAGTTGCG 59 18717787 18717863 CGTTCCAATCGTACTCTGGA 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 3 2 2 82 2R 18706462 18706936 GGACAACGAAGATTTCTCGG 59 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 3 2 2 76 2R 18543371 18543389 GAAACCGTGGAGATGACAG 58 18543244 18543331 AAGATGGGAAAGCAACAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3875 FBgn0034740 FBtr0071861 1 1 1 90 2R 18539341 18539507 AGTATAGCAAACCACCTCCA 58 18539560 18539578 CGCGTACGATTCATGTCAG 59 NA Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859,FBtr0071858 1 2 2 92 2R 18515376 18515394 AGTACTCCCTCGTTGTGAC 58 18515450 18515532 TGTTCTTGGGCAGATCCAG 59 NA Drosophila melanogaster 61 CG11298 FBgn0034721 FBtr0071819 3 1 1 61 2R 18236130 18236148 CATTACTCGCGACATGGAC 58 18236172 18236191 TCAGACGTTTCGAGATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3264 FBgn0034712 FBtr0071781 2 1 1 84 2R 18097125 18097143 CTCTCCGAACTCACTGAGG 59 18097001 18097079 TTAGACCACCTTCAATGAACG 58 NA Drosophila melanogaster 61 CG11170 FBgn0034705 FBtr0071786 1 1 1 60 2R 18065342 18065360 GTTGATCCAGCTCTCCCTC 59 18065300 18065321 GGTTAAGATAATGCGAAAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30281 FBgn0050281 FBtr0071760 2 1 1 81 2R 18002742 18002839 GCAGTCATGAGACAATTAACCC 59 18002879 18002899 CCCGGAACTTCAATAACATGG 59 NA Drosophila melanogaster 61 Gr58a FBgn0041239 FBtr0071728 1 1 1 62 2R 17868371 17868441 ACTTTCATTTGCAGCTGGA 58 17868465 17868485 CCTTATACGTTGACGGATGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071717 2 1 2 137 2R 17691060 17691133 TTTGTTGGACAAGTCGCTG 59 17691233 17691252 AGATGACAAGGACTTACGCC 59 NA InUTR Drosophila melanogaster 61 Grx-1 FBgn0034658 FBtr0071714 2 1 1 60 2R 17645265 17645283 CATCGATGGCAAGTTCGTG 59 17645306 17645325 TATGCCCTGTTCGTATAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30398 FBgn0050398 FBtr0071710 3 1 1 60 2R 17605520 17605538 CAGACGGGTCACATTATGG 58 17605559 17605580 GGGACAATTTGAAGATGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42364 FBgn0259710 FBtr0302526 1 1 1 60 2R 17553882 17553902 TCCTTGTACCACAGAGTTCAG 59 17553923 17553942 CATTTCGCTGCTTATTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shg FBgn0003391 FBtr0071546 2 1 1 101 2R 16943409 16943427 CATCGAGGACATCAACGAC 58 16942182 16942200 CTGATAGTCATCACCACCG 57 NA DesignNoJunction Drosophila melanogaster 61 grau FBgn0001133 FBtr0071548 1 1 1 84 2R 16899144 16899239 TTCTGGTTCGAGGTACTGC 59 16899078 16899096 ACTGATGGAACTCGGACAC 59 NA Drosophila melanogaster 61 CG11159 FBgn0034539 FBtr0086248 3 1 1 95 2R 16543688 16543706 CAGCTACGGTCTGTTTCAG 58 16543480 16543577 TCGTTAAGGAACTCTTCGC 57 NA Drosophila melanogaster 61 DMAP1 FBgn0034537 FBtr0086232 2 1 1 80 2R 16532859 16532938 AGGAGTTTAAAGTTGATCCCG 58 16532979 16532998 ATACCATATCGGAACGAAGC 57 NA Drosophila melanogaster 61 CG13424 FBgn0034520 FBtr0086218 1 1 1 93 2R 16445657 16445675 GAAACGGAGTTCGAAAGGG 58 16445730 16445906 AGATCTTGATCTGCGTTTCTG 58 NA Drosophila melanogaster 61 CG16739 FBgn0034505 FBtr0086286 2 1 1 130 2R 16229945 16230025 ATTGTCAAAGTGGAGCTGC 58 16230119 16230137 TTAAGATCGCCATTACCGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 MED8 FBgn0034503 FBtr0086297 3 1 1 60 2R 16213846 16213864 CTGCAGAACGAACAGAAGG 58 16213804 16213822 GAGTGACCTGTTTCATGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8654 FBgn0034479 FBtr0086340 2 1 1 82 2R 15870485 15870506 CCTACTACTGGTTCTATTGCCT 59 15870549 15870629 CAGCAAGACGAAACTGGTG 59 NA Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086479 2 1 2 84 2R 15588503 15588522 TTCGTTTCTAAAGCATGGGT 57 15588280 15588298 TCATCGACATGTTCAGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473,FBtr0086474 1 2 2 104 2R 15559346 15559421 GCAGTCGAATATCCAATACGA 58 15559487 15559505 ATAGCTATCAGGCGTGGAG 58 NA Drosophila melanogaster 61 botv FBgn0027535 FBtr0086579 1 1 1 89 2R 15017991 15018069 GAATCAAGAGCACCGTGTC 58 15018122 15018140 TCTTCTGGTTGTACTGGCT 58 NA Drosophila melanogaster 61 Jheh3 FBgn0034406 FBtr0086622 3 1 1 95 2R 14749085 14749104 AATTACCTGACCAAGTGGGA 58 14748949 14749033 GTGGATATAGTGAATATTCAAGCCC 59 NA Drosophila melanogaster 61 CG42510 FBgn0260236 FBtr0300645 1 1 1 172 2R 14411204 14411747 AATATGCAGGACGACGAGG 59 14411881 14411901 ACATTTAGCACGTTCGATGTC 59 NA Nonspecific Drosophila melanogaster 61 CG30120 FBgn0050120 FBtr0299806 2 1 1 60 2R 14336335 14336359 CAAGGGTCTATTAAATGACTTCGAG 59 14336374 14336450 TAGCTTGATATTCAGCTTGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 elk FBgn0011589 FBtr0086802 2 1 1 80 2R 13809518 13811134 GCGATATTAAGGCGCTAACC 59 13811175 13811195 CCGGATATAAGCGTAGTACCT 58 NA Drosophila melanogaster 61 lack FBgn0029006 FBtr0086833 2 1 1 95 2R 13481362 13481380 AATTGGATTACCCACGTCG 57 13481498 13487363 CGGGTAGACGAAATAAATCCT 57 NA Drosophila melanogaster 61 CG30101 FBgn0050101 FBtr0086963 1 1 1 80 2R 13296484 13296644 AGGTTGAGGTGGAGAAACC 59 13296422 13296441 AAGGAACCTTCTTCTCGACG 59 NA Drosophila melanogaster 61 CG11400 FBgn0034198 FBtr0086985 2 1 1 60 2R 13022218 13022237 TTATTGGGCCAAGGATTGTC 58 13022260 13022278 GTCAGAGTAGTGCCCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6426 FBgn0034162 FBtr0087042 2 1 1 128 2R 12758830 12758848 CAACCAGACACGTTACTGC 59 12758940 12759028 CAATTGGCATACGCATCCT 58 NA Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 3 1 1 60 2R 12666132 12666150 GTAAATGCTCCCAACGGAG 58 12666172 12666247 AAGAGCTCAAGAAGTACAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Alk FBgn0040505 FBtr0087118 2 1 1 81 2R 12519814 12519832 CAACTACTGGGATGTCCGA 58 12519685 12519773 GGTGGTTAACTCAAGATAGTTGG 59 NA Drosophila melanogaster 61 CG4282 FBgn0034114 FBtr0087144 3 1 1 80 2R 12211737 12211817 GCAGGAACTCAAGGAACAC 58 12211861 12211879 CAGAAGAATGTCATCGGGC 58 NA Nonspecific Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089589,FBtr0089592,FBtr0089590,FBtr0089591 2 5 5 87 2R 12023787 12023805 GATCAGTAATGCCACCCAG 58 12023854 12023938 ATCAGAGTATTCCTGAGAGGC 58 NA Drosophila melanogaster 61 Cyp6a17 FBgn0015714 FBtr0087451 1 1 1 125 2R 10762558 10762636 GGTTGTGATGGAAACGCTG 59 10762725 10762743 GCTGGGATCACAACAATGG 59 NA Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087483 1 1 2 60 2R 10527994 10528015 TTCCAAGTGCATAAATCTGTCG 59 10527955 10527976 CTAAGCTAATGAGGAGGTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290109,FBtr0100370,FBtr0290111,FBtr0100372,FBtr0100369,FBtr0290110 1 6 7 94 2R 10178692 10178710 TTTCGTTCGAGAACACCTG 58 10178766 10178947 AAAGTGTACCATTTCGGTTCC 58 NA Drosophila melanogaster 61 CG6209 FBgn0033862 FBtr0087651 3 1 1 60 2R 9550725 9550743 AGCATCCCAACTGAAGGAC 59 9550683 9550704 TTGGTTCAGGCATATTTGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Drl-2 FBgn0033791 FBtr0087794 3 1 1 81 2R 8954777 8954872 CAGCATATTCGACCGTTTCC 59 8954715 8954734 GGTCTGTTCAAGGTTCATGG 58 NA Drosophila melanogaster 61 Drl-2 FBgn0033791 FBtr0087794 1 1 1 80 2R 8954777 8954872 CAGCATATTCGACCGTTTCC 59 8954716 8954735 GTCTGTTCAAGGTTCATGGG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 2 6 6 80 2R 8765630 8765648 TCTTGGGTCTGTTTACAGC 57 8765510 8765586 CCATGAGAACCTCTTTCGG 57 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 1 2 2 80 2R 8372501 8372519 TGCCAATTTGTTCCTCACC 58 8372561 8372635 GACTCTGTGGTTATCACTTGC 59 NA Drosophila melanogaster 61 CG30050 FBgn0050050 FBtr0289993 3 1 1 89 2R 8296534 8296614 GCTGATTCCAAACATGGGC 59 8296667 8296685 ATCCTGCAGTACAGGTTCG 59 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 2 2 2 89 2R 8087084 8087347 TGTGTTCAGAGATGTTGAGC 58 8087014 8087032 ACTTTCAGGACGTTGAAGC 58 NA Drosophila melanogaster 61 CG8858 FBgn0033698 FBtr0088008 3 1 1 81 2R 8084043 8084063 AAGATACGGAGGATAATGCAC 57 8083929 8084003 AGATTGGATTCACTTCTCTTGG 58 NA Drosophila melanogaster 61 CG8378 FBgn0027495 FBtr0087983 1 1 1 80 2R 8028712 8028786 ACTTCCAGGCTCTAGAGCT 59 8028830 8028848 TAGCATAGCCGATGGACAG 59 NA Drosophila melanogaster 61 otk FBgn0004839 FBtr0088028 1 1 1 95 2R 7890221 7890300 TTCACCCATAGGGATCTGG 58 7890144 7890164 GCTATACTTGTCCTTGCAGAG 58 NA Drosophila melanogaster 61 Mtor FBgn0013756 FBtr0088033 3 1 1 94 2R 7746906 7746924 GTGACTCTACCTCAGGCTG 59 7746982 7747056 ATCTCCACAGAGCTTTCGT 58 NA Drosophila melanogaster 61 pyr FBgn0033649 FBtr0113070 1 1 1 80 2R 7611519 7611808 GACTGGTTGGAAAGAGAAACG 59 7611847 7611868 CGCTACTAAAGTTCTGATTGCC 59 NA Drosophila melanogaster 61 Ir48b FBgn0033648 FBtr0088080 2 1 1 60 2R 7589323 7589344 CCATGCTATATGTGAATCGCTG 59 7589284 7589303 AGGAACCTCATGTAGAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 1 2 2 80 2R 7511521 7511539 ATCGAGGTCTATCTGGGTC 57 7511398 7511477 TGGAGGAACTTTCTCCCTG 58 NA Drosophila melanogaster 61 CG12917 FBgn0033490 FBtr0290287 3 1 1 151 2R 6025374 6025456 CTTTCTGGCTTGGGAAGTG 58 6025569 6025589 AGTACACGAGTAGAGTGACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12918 FBgn0033477 FBtr0088433 1 1 1 80 2R 5938841 5939053 TGATGGAGAAGATCTGCGA 58 5938779 5938799 TCTTGAGGAGTGTGAATTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 1 3 3 80 2R 5919619 5919726 CAGATCAATGGAGGATACCG 57 5919558 5919576 TAAGAATGCGTTTCTGGGT 57 NA Drosophila melanogaster 61 CG1675 FBgn0033457 FBtr0088375 2 1 1 60 2R 5753797 5753815 TTTCGACGCATAAAGCAGG 58 5753838 5753857 TCACGTTCTCCTTCAGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 2 2 2 117 2R 5592148 5592169 TCATATCGCAAGTGACTTAGAG 57 5592300 5592385 CACTCTAATCTCCTTAGATCGG 57 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 1 3 3 101 2R 5475200 5475289 CAAGGGTATCAGGTCCACTC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 3 2 2 91 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185039 5185789 TCGGTATAGCTGATATGGCAG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 2 4 4 119 2R 4642430 4644855 GAACCAAAGACTATCGATATCTCG 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 3 3 3 86 2R 4508172 4508246 GTTACGAAGCCTTCCATTCG 59 4508295 4508313 AGTAGCAGTTCACCTTGGG 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 1 4 4 80 2R 4370526 4370649 CCCTGGTTTGTGGAATTCTG 59 4370465 4370486 GGTGTAGTTATTGTACGGAGTG 58 NA Drosophila melanogaster 61 CG8693 FBgn0033294 FBtr0088748 1 1 1 82 2R 4347505 4347609 AACTGGGTGATCGGTAACC 59 4347655 4347673 AGCAGGATGTTGAAGAGGT 58 NA Drosophila melanogaster 61 Lcp2 FBgn0002533 FBtr0088761 1 1 1 83 2R 4321951 4322034 TCAAGTTTGTGATGATTCTCGC 59 4321889 4321908 CATCAGCGTGTACATCATCG 59 NA Drosophila melanogaster 61 CG18449 FBgn0033285 FBtr0089732 1 1 1 60 2R 4255219 4255237 TGAAGCAGTTACGTTTGGA 57 4255177 4255195 TGGTTTCGCTCTTGATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 3 4 4 85 2R 3806268 3806288 GCGGCTTTAATTCAAAGAACG 59 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088836 2 1 4 165 2R 3700210 3700228 AAACTCTCGACTTTCGACG 57 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nec FBgn0002930 FBtr0089052 2 1 1 105 2R 3044373 3044391 CCAAGTTGATGGATCAGCC 58 3044220 3044304 AACTTGGCATAGGAAGCTG 57 NA Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 1 2 2 92 2R 1249045 1249113 TGACGAAGATGGTAATGAGG 57 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269,FBtr0111268 1 2 2 86 2R 124473 124494 CGAGTTTGAGACATACGAACAG 59 124351 124429 GGCAATATGTCCTGTATACACC 58 NA Drosophila melanogaster 61 snRNA:U5:34A FBgn0003935 FBtr0080451 1 1 1 70 2L 13244852 13244872 CTGGTTTCTCTTCAATTGTCG 57 13244904 13244922 TAGAGTGTTCCTCTCCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40006 FBgn0058006 FBtr0111230 3 1 1 87 2L 22580845 22580920 TAAACTTGTACCGGGTGGG 59 22580776 22580798 CCATTATCAAAGGCGTTATCCTC 59 NA Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111256 2 1 4 126 2L 22431007 22432690 TATACTCGCCAAGGTACCG 58 22432777 22432798 TGGTATACTTGGTTTCCTTTCC 58 NA InUTR Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111258 1 1 4 86 2L 22431077 22432692 TTAAAGCAATGGTACCGGT 57 22432742 22432760 TCAACCTGTATTTCGCAGG 57 NA InUTR Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 1 3 3 80 2L 22364224 22364242 CCATTACGCCAGTTGTGTC 59 22364283 22365202 GCTTTGCGAAATAAAGATCTGG 58 NA Drosophila melanogaster 61 CG42597 FBgn0260996 FBtr0301799 1 1 1 60 2L 22064747 22064766 AAATGGCACAACAGTCTTGG 59 22064706 22064724 TTCTGTTTGGACGAAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33883 FBgn0053883 FBtr0091887 1 1 1 60 2L 21499468 21499486 CGTAATTCGTGATGCCGTG 59 21499426 21499445 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 3 2 3 62 2L 21311999 21312017 ACTCAAACGATACGGAGTG 57 21312042 21312115 CGCCAATAAGAGTAATGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG31673 FBgn0051673 FBtr0081422 1 1 1 80 2L 20830786 20830870 GCCCAATTGTGTTATCCTTCC 59 20830911 20830930 TTATTGGCAGCAAGCAATCC 59 NA Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 1 2 2 128 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781805 20781823 TACTTATCCTTGGTGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18094 FBgn0032791 FBtr0081243 2 1 1 81 2L 19490500 19490520 TGGAACTTATAGACCTTCGGC 59 19490557 19490642 CAACAATAATCTGTAGTCGTAGTCC 59 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 3 2 2 82 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488502 ATAGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 CG17350 FBgn0032772 FBtr0081199 2 1 1 90 2L 19382124 19382210 AACGAAAGAGTCCAAGGAGAG 60 19382261 19382280 GATTTCGAACGTGATGTCCG 60 NA Drosophila melanogaster 61 CG31797 FBgn0051797 FBtr0081227 1 1 1 60 2L 19259745 19259763 CGATGCAAGACAGAGTACC 58 19259703 19259721 AGTTGGAGCAGTAGATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31800 FBgn0051800 FBtr0081179 1 1 1 80 2L 19033925 19034001 GCTATCACCGGAAGAATGG 58 19033863 19033882 GTCCAGCTCAAATCGTACTC 58 NA Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0081095,FBtr0273194 2 2 2 60 2L 18689947 18689966 ATAGTGGAGCCTAAGAAGCG 59 18689989 18690007 GTGTTTCCACAGTGAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31742 FBgn0051742 FBtr0081025 1 1 1 60 2L 17991143 17991163 GTTGGATCTCAGTGATAACGA 57 17991182 17991203 GGTAGCATGATATACTGCAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997,FBtr0080996 1 2 2 82 2L 17487191 17487210 AGTATCCATTAACCGTGCTC 57 17487063 17487146 TGTTAGGTGAACCTCCCTC 58 NA Drosophila melanogaster 61 Sgt FBgn0032640 FBtr0080982 1 1 1 60 2L 17474489 17474510 ATAACATGACCAGCCAATTGAC 59 17474530 17474549 TGTTCATTGCCAGGATTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyt-c-d FBgn0086907 FBtr0080888 2 1 1 208 2L 16716194 16716212 AGAGCGAGAAGAACTGTCC 59 16719289 16719310 CCCTTCTTTATATTGGCATCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838 3 1 2 74 2L 16343298 16344437 CTGAAGAAGGAGACTTGCG 58 16343242 16343260 TGAAATCGCTCTCCTTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13243 FBgn0028903 FBtr0080787 3 1 1 175 2L 15852692 15852764 AAAGAATGGATGCTCAAGGAG 58 15852901 15852919 CGCCGAAATGATACTCGAC 58 NA InUTR Drosophila melanogaster 61 CG15263 FBgn0028853 FBtr0080729 3 1 1 60 2L 15285180 15285199 CCTCGATTCAATGATGTCCT 57 15285221 15285240 ATCCTTTGTCCTGGTATTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 3 3 9 177 2L 15261626 15261727 AGTGGAAATTGAATGCGATACG 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 CG33911 FBgn0053911 FBtr0091915 2 1 1 105 2L 15232914 15232933 AATCGGATGTTCAAAGTCGA 57 15233001 15234588 TAGAACGAGAAATGCAGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3473 FBgn0028913 FBtr0080661 2 1 1 60 2L 14563259 14563279 ATTCGTACCGTTCTTCTTTCG 58 14563219 14563238 GTGGATCATCTGGGTTTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 noc FBgn0005771 FBtr0080643 2 1 1 87 2L 14491301 14491319 TTCAACCGGATTATCTGGC 57 14491672 14491690 ATTTGGGAGCAAGTCTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16848 FBgn0032522 FBtr0080501 2 1 1 60 2L 13412890 13412911 GAGAAGTTCGTGGATGATTGTG 60 13412932 13412950 CTCCTTCGTATCGCCTCAG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosalpha6T FBgn0032492 FBtr0080448 2 1 1 60 2L 13232358 13232376 TGTGCCAGTACATGAGGAC 59 13232396 13232418 GGAAATTCTGCGTTATAGGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tor FBgn0021796 FBtr0080422 2 1 1 91 2L 13011610 13011628 AGATCTCGAACTGGCAGTG 59 13011680 13011775 AAGTAATCACCTGAAGGTTGGT 59 NA Drosophila melanogaster 61 spict FBgn0032451 FBtr0080397 1 1 1 98 2L 12705083 12705599 CTTCTGACAATGGGTGTGG 58 12705661 12705679 GATGATAACACTCAGCGCG 59 NA Drosophila melanogaster 61 CG17211 FBgn0032414 FBtr0080336 1 1 1 80 2L 12128405 12128532 CTTCAATAGAAATCACTACACCCG 60 12128568 12128589 CGATTAGTTCATCGAGATTGGG 59 NA Drosophila melanogaster 61 Ada1-1 FBgn0051865 FBtr0080289 2 1 1 60 2L 11997049 11997068 TAACACCTGACAAACTGCAC 58 11997091 11997109 TCGATCTTGTTGAGCAGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31864 FBgn0051864 FBtr0080288 2 1 1 71 2L 11995881 11995899 ATGTGGTTAGACACGAGGC 59 11995933 11996010 CCCGGAATTCTTTGGATGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG16965 FBgn0032387 FBtr0080284 2 1 1 80 2L 11982347 11982430 GATTAACTCTCCAAAGTTCCTAAGG 59 11982467 11982486 TTGTTGACCACCACAAAGTC 59 NA Drosophila melanogaster 61 CG12253 FBgn0026148 FBtr0080149 1 1 1 92 2L 10988974 10989059 CAAGCATTGATACGGAACAG 57 10989114 10989132 GATTGTTGTCATCTCCGGA 57 NA Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 3 1 1 244 2L 10653276 10653444 AATCCAGATTTGGCGTTGC 59 10653652 10653670 AATTCCGATTGGCTGATGG 58 NA DesignNoJunction Drosophila melanogaster 61 ppk10 FBgn0065110 FBtr0100097 3 1 1 83 2L 10451810 10451828 ACTTTGCCGAGTGTTACAG 58 10451689 10451764 CTTGATGCCATTGTTACGAC 57 NA Drosophila melanogaster 61 cdc2 FBgn0004106 FBtr0080051 1 1 1 114 2L 10386116 10386134 ATGGCGTGGTGTATAAGGG 59 10385635 10386039 GAAATTTCTCTGATCGCGGT 58 NA Drosophila melanogaster 61 CG5604 FBgn0032208 FBtr0080074 2 1 1 84 2L 10282269 10282352 AAAGACAGTCCCGGATTCC 59 10282203 10282221 TTGTGAATTGGAGGAACGC 58 NA Drosophila melanogaster 61 CG13137 FBgn0032188 FBtr0301684 2 1 1 60 2L 10172816 10172836 GGAACAACGCAAATATAGGCA 59 10172854 10172876 GCCAGTTCCCATAGTAAATTGAG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gdi FBgn0004868 FBtr0079862 3 1 1 86 2L 9494280 9494298 CAGCTACGTTTACAAGGGC 58 9493094 9494232 TCGAACATACCCATGAGATCG 59 NA Drosophila melanogaster 61 CG31609 FBgn0051609 FBtr0299873 1 1 1 88 2L 9097665 9097686 GTATCCAGTAGTAGCAGTTGTC 58 9097793 9097811 AATCATCACAGGGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32986 FBgn0052986 FBtr0079734 2 1 1 60 2L 8863107 8863128 ATCCTGTCCAAGGTAATTCCTC 59 8863148 8863167 TTGCACTTATGAATCCTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079678,FBtr0079679 2 3 3 92 2L 8484071 8484089 ATCTGATCCACTTGTCGGG 59 8484145 8484819 CCACGTTCGTAAAGTACCG 58 NA Drosophila melanogaster 61 CG13397 FBgn0014417 FBtr0079711 1 1 1 84 2L 8411344 8411362 TAGAGTAATCGGCGAACGA 58 8411199 8411298 CATGCTAATCTGAAAGCTTCG 57 NA Drosophila melanogaster 61 CG7627 FBgn0032026 FBtr0079608 2 1 1 90 2L 8359693 8359713 CTGGCTACCATATTCGTACAC 58 8359558 8359641 CAGCGATTCCAATCTCACG 59 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935,FBtr0301187 1 2 2 101 2L 8213439 8213457 ATGGCACCATATACTCCGG 59 8213522 8213791 GTTTGCCTTCACTGATGGC 59 NA Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 2 2 2 81 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195911 8195931 GTGGGTGTAAATGATCTGCAG 59 NA Drosophila melanogaster 61 CG34134 FBgn0083970 FBtr0110894 2 1 1 60 2L 8190435 8190453 CGAGAGCGACATAAGTGAG 57 8190393 8190413 CGTGGCACAGTTTCTATAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8668 FBgn0031988 FBtr0079576 3 1 1 63 2L 8132147 8132166 AGAACGCCGATAGGATACTG 59 8132192 8132610 ATATCCGATGGATTGCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 poe FBgn0011230 FBtr0079545 1 1 1 80 2L 8056362 8056380 CTTATTCGTGTCCTAGCCG 57 8056245 8056320 CAAAGTGTCCTTGAAATGCTC 58 NA Drosophila melanogaster 61 CG14532 FBgn0031966 FBtr0079555 3 1 1 60 2L 7899935 7899953 GCTCCATTTCCACATGGAC 58 7899893 7899916 TGGATAGTGGATAGTACGAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34132 FBgn0083968 FBtr0110879 2 1 1 144 2L 7885669 7885689 CAAAGGTGAACTTATGGACCA 58 7885794 7885885 AATGCATTTCTGTTCGGACG 59 NA DesignRelaxed Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0302162,FBtr0290119 1 3 3 80 2L 6983241 6983326 CAAGTGTCAGGAGGTCTACTG 59 6983181 6983200 CGATAGGTTACGTTCGAGGA 59 NA Drosophila melanogaster 61 nop5 FBgn0026196 FBtr0079369 2 1 1 75 2L 6917351 6917369 GCCAAGTTCGAGAAGTACC 58 6917116 6917134 TCACGTTCAAGGTGTTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 TTLL3B FBgn0031853 FBtr0300056 2 1 1 84 2L 6734568 6734658 GAAGTACATAGAGCGACCC 57 6734706 6734724 CTTAGTGTCCGTGATGGTC 58 NA Drosophila melanogaster 61 retm FBgn0031814 FBtr0079272 2 1 1 111 2L 6451701 6451719 AAGTTCCTGTTCTACGGCC 59 6451005 6451626 GAATCATGGTCTTGCACGG 59 NA Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079207 3 1 2 99 2L 6154871 6154958 TGAAGCCTAGCAACAATATGTG 59 6154793 6154811 CAAGGACTACACCAGGGTC 59 NA InUTR Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218 1 1 4 115 2L 6047770 6047907 GAGTAAAGGCTCAGCTCAG 57 6047673 6047691 ATATGTGCTCCGATGTCCA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079174,FBtr0079173 3 2 2 60 2L 5970011 5970029 TTGAACTCTACCTCACGGC 59 5970052 5970071 AAGGGATAGCCCACAATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9044 FBgn0031752 FBtr0273412 2 1 1 93 2L 5952614 5953420 AAGCAACAGCATTGGTTCC 59 5953474 5953495 GGATTGATTGGAGTCGAAAGAG 59 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 3 1 2 84 2L 5763366 5765976 ATGTTTGGCTCAATGGCTC 58 5763300 5763318 TGTAAGAGTCGCACTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31646 FBgn0051646 FBtr0079114 2 1 1 81 2L 5632299 5632377 CAACAAAGAACAACGATATGGC 58 5632239 5632257 GTTCTGTTGACTGTTGCCG 59 NA Drosophila melanogaster 61 CG31648 FBgn0051648 FBtr0079098 2 1 1 60 2L 5527653 5527673 CTTCTTCTACATCGATCCCGA 59 5527695 5527713 GATGGTGTCACAGGTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cype FBgn0015031 FBtr0079072 3 1 1 63 2L 5327629 5327648 AATTCTGGTCAACGATCCCA 59 5327674 5327759 GTTGGCATCGTACTTCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 3 5 8 97 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070167 5070186 GAAGATAGCGCTCTTGAGGA 59 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 3 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 Sgs1 FBgn0003372 FBtr0077393 3 1 1 115 2L 4937415 4937433 ATAGCTCCACTGCAAGGAG 59 4937576 4937595 TTGCATACTATCCCAGTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11926 FBgn0031640 FBtr0077387 3 1 1 88 2L 4851546 4851618 TAGTAGTGCCAAGGTGTCC 58 4851669 4851688 TTTGCGATCGTATCGTTGTG 59 NA Drosophila melanogaster 61 Psf2 FBgn0031599 FBtr0077461 3 1 1 173 2L 4386696 4386772 GCGCTCAAAGTTCTTTACC 57 4386541 4386559 TTGATAAAGGCGTCGATCG 58 NA Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077463 2 1 2 147 2L 4382639 4382711 TAAACAAACGACTAGGGCGA 59 4382511 4382529 TGGTCCCTTATGCTTGGTG 59 NA InUTR Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 1 3 3 80 2L 3721528 3721551 CTGAATGAGTACTTCTTTGATCGG 59 3721587 3721663 ATAATGCAGCTTTCCAGTTCTG 59 NA Drosophila melanogaster 61 CG3347 FBgn0031513 FBtr0301033 2 1 1 132 2L 3270672 3270692 TCCTGTTCTAGATACTGTTGC 57 3270785 3270862 CATTGCCAAGCAATAAACCA 57 NA Drosophila melanogaster 61 CG15403 FBgn0031504 FBtr0077661 3 1 1 60 2L 3129069 3129087 GGGCATTCAAGGAGTATGG 58 3129110 3129129 GAAATGACGGAAATGACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ts FBgn0024920 FBtr0077679 1 1 1 60 2L 2968689 2968707 CATTAAACGTCAGGTGCAG 57 2968647 2968667 GTCGACTATCTGAAAGTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 1 4 4 223 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882297 2882315 ATTATCCGCGAAGGAGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Prosbeta4R2 FBgn0031443 FBtr0077699 1 1 1 91 2L 2655539 2655622 TGGTCTTCATGAAAGATGACCA 59 2655674 2655692 CTGAATGGTATCGCCACCA 59 NA Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 3 2 2 85 2L 2368138 2368156 ACTCTTTGCTAGTGGCTCC 59 2368204 2368325 AGGAAGTGATCTGAGTGCTG 59 NA Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0077841 3 1 2 87 2L 2226169 2226485 GCTTCTAGAGTGATACTGCCA 59 2226102 2226121 GCCTCTGAGAGTTTCTTCGA 59 NA InUTR Drosophila melanogaster 61 CG31937 FBgn0031360 FBtr0077884 2 1 1 60 2L 1730080 1730098 TACAAGTCCCGTTTCGGAG 59 1730120 1730140 CAGTTATCCAAACCACCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 frtz FBgn0086698 FBtr0077911 3 1 1 91 2L 1712078 1712153 GTGGTGCCAGAAATTCCTC 58 1712005 1712025 TTAGGATTTGTCAGATGTCGC 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 1 6 6 126 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 CG33923 FBgn0053923 FBtr0091927 3 1 1 163 2L 1341723 1341742 ATTGCAGAGATTGAATGGCT 58 1341511 1341597 TGATATCGTGGTCGTAGGG 58 NA Drosophila melanogaster 61 CG5001 FBgn0031322 FBtr0077972 3 1 1 282 2L 1191872 1191890 GTACGACAAATACGGCGAG 58 1192196 1192271 TGATCTGAAAGAGGGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5118 FBgn0031317 FBtr0077979 2 1 1 96 2L 1171782 1171800 TATAAGCGGAAACACCGAG 57 1171634 1171722 GTGAATGGGTAGCAATCCT 57 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 3 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073515 2 1 2 60 X 11473568 11473586 ACGTTACTTCCGAGATCCT 57 11473609 11473628 CTACACTGGTTGGATTTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1631 FBgn0031101 FBtr0077297 1 1 1 80 X 20198729 20198809 TACTAGCGATAGCGAAGATGAG 59 20198850 20198868 GACAGCAGACTGTACATGC 58 NA Drosophila melanogaster 61 Ndc80 FBgn0030500 FBtr0073850 2 1 1 194 X 13505498 13505520 GGACTTATTGCGGATCTATTCAG 59 13505258 13505346 AAGCCATGATTTGTTCACCTG 59 NA Drosophila melanogaster 61 c11.1 FBgn0040236 FBtr0071326 1 1 1 93 X 9175653 9176835 ATTCTGGAAGGCGTTCTCC 59 9175578 9175596 AGATCTTCACGATCGCCTG 59 NA Drosophila melanogaster 61 CG6204 FBgn0039165 FBtr0084555 2 1 1 80 3R 20020754 20020834 TAAAGGAGGATTGCCTAAGTG 57 20020876 20020894 GGAACATGATCAGTGGTCG 58 NA Drosophila melanogaster 61 mRpS24 FBgn0039159 FBtr0084577 3 1 1 89 3R 19989000 19989018 AACAGGCCTCTTACCTACG 58 19988872 19988949 CTTCATTGTTGACGTGTTCCA 59 NA Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 3 2 2 89 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216839 14216858 TTTCCAGAGAATCCTGTGGG 59 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 1 2 2 80 3R 8484657 8484734 CCTGTGATTAAGTCATACGCC 59 8484773 8484794 AATGCCCAGACTAATCTTTGAG 58 NA Drosophila melanogaster 61 Pros25 FBgn0086134 FBtr0082590 3 1 1 125 3R 8257375 8257479 CATTATAGCTTCCAACGGCG 59 8257567 8257585 ATTCCCGAGTACACCATGC 59 NA Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082331 2 1 2 82 3R 6714835 6714854 GAACGAGAATTGCTACCGAG 58 6714050 6714790 TCAACCTCTCCTTGAGACG 58 NA InUTR Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 3 2 2 118 3L 10640226 10652485 GACGAGATACAGATCTATCGGG 59 10640129 10640147 TTCAGCTTGTTCACCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 3 6 6 60 3L 5765435 5765456 TAGAGGATATGGGCTACAAGTG 59 5765475 5765552 AATTGCTTTGTGGCAGATACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13707 FBgn0035578 FBtr0073357 3 1 1 100 3L 4838436 4838740 GAGCTTAGTGCTCGAATCC 58 4838354 4838372 CCTCGATCATCCTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 1 5 5 80 3L 4505303 4505415 ACTAAAGTTTGAACAGGTTCGC 59 4505244 4505263 AGATTTGCGATGTCGAACAC 59 NA Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 3 2 2 93 2R 1249045 1249114 GTGACGAAGATGGTAATGAGG 58 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 CG15144 FBgn0032648 FBtr0080992 3 1 1 83 2L 17528312 17528330 ACAAGTGCGACTTCTTTCC 58 17528189 17528268 CAGAAGATTCCCTATAGAGGGT 58 NA Drosophila melanogaster 61 ms(2)34Fe FBgn0261529 FBtr0080623 2 1 1 80 2L 14329103 14329182 CAAGCGAGAATACATTCGAGAC 60 14329220 14329241 TAGAAGTCGTTATCCATTTGCC 59 NA Drosophila melanogaster 61 Ast-CC FBgn0032337 FBtr0114455 3 1 1 120 2L 11084337 11084818 AGTATCCGATGGTGGTTCC 58 11084235 11084254 CTATCTCCGAAGAATTCGCC 58 NA Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700,FBtr0079699 2 2 3 114 2L 8493050 8493068 CGCTGGCTATAACGAACTG 58 8492790 8492974 GGTTCGTTTGGAATTCTCCAG 59 NA Drosophila melanogaster 61 CG2794 FBgn0031265 FBtr0078067 3 1 1 60 2L 565845 565865 CTATTACGGAGGCTATAACGG 57 565887 565905 TGTGGCTGTTTGGTTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17075 FBgn0031239 FBtr0078142 3 1 1 60 2L 266230 266249 TAATCACCGGGCTCTATCTG 58 266189 266208 GGATCTGTCAGTAAAGCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17560 FBgn0038450 FBtr0083330 3 1 1 96 3R 12444424 12444442 GTACACCTACACCAAAGCC 58 12444502 12444575 AGTGGACATTATGATCGCC 57 NA Drosophila melanogaster 61 CG7631 FBgn0028945 FBtr0080754 2 1 1 80 2L 15628884 15628967 GATATCTGAGGAGTTTGATGCT 58 15629005 15629026 CGAATACAAGACGAATACTCGA 58 NA Drosophila melanogaster 61 CG15255 FBgn0028950 FBtr0080785 1 1 1 60 2L 15611492 15611510 ATGGCCTTATCAACACGGA 59 15611450 15611470 TCTGATATCCTGTAGACCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr10a FBgn0045502 FBtr0073549 1 1 1 90 X 11307681 11308543 ACCAGGGAGATAGAACACCT 59 11307610 11307628 ACACCAATCGACGATCCAG 59 NA Drosophila melanogaster 61 CG2260 FBgn0030000 FBtr0071194 3 1 1 129 X 8013314 8013395 AGCGAAAGGAGTTTATTGCC 59 8013204 8013222 TTGAAACGATCCAGAACGG 58 NA Drosophila melanogaster 61 crn FBgn0000377 FBtr0070418 2 1 1 205 X 2143911 2143929 CATTGCTAAGTGAGGGACC 57 2143666 2143684 TGATAGTCTGCCAACTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14860 FBgn0038273 FBtr0289976 3 1 1 166 3R 10720664 10720684 GTGGTTGGATAATATTGCGGA 58 10720872 10720890 TTGGCTTACTGACCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 3 1 2 106 3R 3826730 3826819 TGAACAATTTGGTCCGTGC 59 3826642 3826660 TTGTACCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 CG3947 FBgn0037019 FBtr0078278 2 1 1 80 3L 20771078 20771159 ATCCTACTTTATAGCAGGTCGC 59 20771019 20771038 AACACCAGCATGTTTGACAG 59 NA Drosophila melanogaster 61 CG13801 FBgn0035332 FBtr0072888 1 1 1 60 3L 2361046 2361066 GATCGTAGTCTTGAGAACTCC 57 2361088 2361106 CGAATGAGATCACCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075029 1 1 4 266 3L 19139797 19139821 GGATCTAGATTTCTTATCGAAGGAG 58 19139365 19139384 CCTTCAGTCGATTGTGTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snmRNA:331 FBgn0065099 FBtr0091929 2 1 1 60 3R 3300640 3300661 CTTATCAGATCTGTTCAGAGCC 58 3300601 3300620 GCAGAATTACTGGGAAACAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301176 1 1 4 134 3R 5377491 5377509 TCTTTGTCAGGTCGAACCC 59 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 shu FBgn0003401 FBtr0072237 2 1 1 157 2R 19730592 19730668 TGTCCTATTCGGATCTCGTG 59 19730454 19730472 ATATGTCCACGGTGAACGT 59 NA Drosophila melanogaster 61 tty FBgn0015558 FBtr0077224 2 1 1 92 X 21207503 21207815 AGATCTACCTGGAGAGCCT 58 21207429 21207449 GGGTCATGAGATAGAAGAGCA 59 NA Drosophila melanogaster 61 CR41602 FBgn0085813 FBtr0114268 1 1 1 60 XHet 194049 194067 TGAAACACGTACCAAGGAG 57 194089 194109 CGCTATTAGGTTCATATCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 3 1 1 199 X 6174554 6174573 CATTGCGATGAGACATACGC 59 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337,FBtr0070095 1 2 2 196 X 375434 375452 GATGCTATCAGGAGTGCGT 59 375193 375278 GATAGTTCAACGAGTGACAAGAG 59 NA Drosophila melanogaster 61 tRNA:S474:12Eh FBgn0011974 FBtr0073865 1 1 1 60 X 13964687 13964705 AGTGGTTAAGGCGTCTGAC 59 13964729 13964747 GTAGGATTCGAACCTACGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32500 FBgn0052500 FBtr0077374 2 1 1 76 X 21493235 21494320 TCCTTTGGCCAAATTGCTG 59 21493177 21493195 TCGAGATGGTGACGAAGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9571 FBgn0031086 FBtr0070032 1 1 1 60 X 19985905 19985923 ACAGGTCATCCCTATCAGC 58 19985863 19985881 TATATGGGCCGTTACCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7772 FBgn0030883 FBtr0074540 2 1 1 107 X 17800360 17800693 ATCAATCGGATCACCTGGG 59 17800271 17800290 GATGATAAGCGGTATGCTGG 58 NA Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539,FBtr0114540 2 2 2 227 X 17115619 17115637 CTGATCGCCTTAACCTCAG 57 17116181 17116199 GTTCTTCTGCCAACCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 sl FBgn0003416 FBtr0074230 2 1 1 119 X 16246751 16246834 GGAAACTTGAAGGTGGCAG 59 16246916 16246935 ACGAAAGGCTATAGTCTCCC 58 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 3 4 4 80 X 15975869 15975889 CAAATGAACTTTCCGTGTGGA 59 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089701,FBtr0089702 3 2 2 64 X 15471673 15471691 AAGGCTATGAAGCATGCCA 59 15471627 15471645 TCCTTCCAGACTTCCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 2 3 3 69 X 15276615 15276633 GAACAACATACCCGGATCG 58 15276374 15276582 ATGAAAGCTGGGAAACTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15027 FBgn0030611 FBtr0073965 3 1 1 61 X 14979286 14979305 ACCTGAAACTCGACCTAGTC 58 14979244 14979264 TTTCTTAGACTGCTCCTTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13402 FBgn0030538 FBtr0089267 2 1 1 60 X 14065795 14065813 TCGATCTACCTGTCCTCCT 58 14065753 14065773 TATTTGGATAGAGCTGCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 3 4 4 80 X 13696194 13696279 TCTCAAGAGCTTGGTTATCCT 58 13696321 13696339 GCAGTGGTGTAGTAATGCC 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300201,FBtr0300202,FBtr0300204,FBtr0299860 3 7 7 99 X 12189633 12189651 CCGCATCCTTCTATCAGAG 57 12189713 12206839 ATTACGGATACACGGTTCTC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 3 1 15 166 X 11290024 11290044 TTCATCCGGACAACAATTGTC 59 11294856 11296748 TAATCTCGCCTCCTTCAGC 59 NA Drosophila melanogaster 61 CG1394 FBgn0030277 FBtr0073467 1 1 1 60 X 11064510 11064528 TTCGTACTGGAATGGCCAG 59 11064468 11064486 CATGAAGTCACCCATCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15201 FBgn0030272 FBtr0073439 3 1 1 195 X 11038402 11038420 TCTCAAGTATCTGCCGCTG 59 11038710 11038728 TTAGGGACACTTGAGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299513 1 1 2 80 X 10999426 10999445 GGTTTGGACGAATGTATCCG 59 10999488 11000540 GCGTACGTAAGATTGCCTC 58 NA Drosophila melanogaster 61 Yp1 FBgn0004045 FBtr0071419 2 1 1 81 X 9948098 9948117 TCGACGATTTCACCATTGAG 58 9948161 9948256 GACAGGTGGTAGACTTGCT 59 NA Drosophila melanogaster 61 Ost48 FBgn0014868 FBtr0071344 2 1 1 153 X 9052444 9052462 GATGTGGAAGGCTCTCCTG 59 9052235 9052327 CTTAAATCCGCGATCCTGC 59 NA Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 3 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific Drosophila melanogaster 61 Ubi-p5E FBgn0086558 FBtr0070933 2 1 1 82 X 6172525 6172543 TTGTGAAGACCCTCACTGG 59 6172461 6172480 CTGGATCTTTGCCTTAACGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2652 FBgn0025838 FBtr0070505 1 1 1 63 X 2576417 2576436 GTATTTGCGAGGAGATGCTC 58 2576373 2576391 TTCTGTCTCATCATGGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0070437 2 1 4 85 X 2476848 2477033 GAGTACCCACATATCTTCTTTACC 58 2477075 2477095 GGTGCAATCATCTTGTACTCC 59 NA InUTR Drosophila melanogaster 61 CG34052 FBgn0054052 FBtr0100107 3 1 1 65 X 2216175 2216193 GTACAGTAAGGACTGCCTG 57 2216064 2216082 CAGGGCAGTTCCAATTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14805 FBgn0023514 FBtr0070312 1 1 1 80 X 1772165 1772183 GTGTATGTTGGCTCCAGTG 58 1772223 1772302 CTCTAGGTGATATTCCTTCATGC 58 NA Drosophila melanogaster 61 CG14630 FBgn0014903 FBtr0070175 1 1 1 75 X 926096 926114 TAAGAAATTGGCCGAACGA 57 926464 926483 TGGTTTGGATTTAACCTCGA 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CR41606 FBgn0085816 FBtr0114274 1 1 1 63 U 4100840 4100858 CTGTTCTACCGACAGAGGG 59 4100885 4100903 ATATGAGAGGTCGGCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40635 FBgn0085506 FBtr0302344 2 1 1 64 U 9363983 9364001 TGGATCAGTTCGTTCCTCG 59 9363937 9363955 ATGTAGTCGATAGGCACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11077 FBgn0039930 FBtr0089222 2 1 1 60 4 1049488 1049509 ATATTGGTCCGCAACTATATGC 58 1049449 1049469 GCACGAATCTGAAGTTTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385a FBgn0082962 FBtr0113577 1 1 1 60 3R 1422156 1422177 AAGGGTTCATGTACAGTATGCA 59 1422117 1422135 GCATTGGGTTATATGGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15550 FBgn0039811 FBtr0085751 2 1 1 60 3R 26762704 26762722 ACTGGAATCCATACCCACC 58 26762662 26762683 AATACAAGTGATCAGGACTACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555,FBtr0300600 3 5 5 80 3R 25859252 25859330 ATGAGTCTAAGCGGACACTC 59 25859370 25859391 TTTGTTTGTCAACTTCCTCGAG 59 NA Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531,FBtr0085532 3 2 2 60 3R 25643315 25643333 CCGTACATAGTGTCCATCC 57 25643273 25643293 TATTTATTATGGAGCCGCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839,FBtr0301838,FBtr0301837,FBtr0300337 3 4 4 84 3R 24347134 24347152 TTCCGGAAAGTACACTTGC 58 24347010 24347089 TGGTACAACAGATTGAATGGAC 58 NA Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 3 1 1 86 3R 22825495 22825576 GGACGGATGTATTACGAAGTG 58 22825619 22825642 CACAGAGTCCTTAATAATGGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Gr97a FBgn0041224 FBtr0085081 3 1 1 86 3R 22791094 22791169 TAACCAAACCCTCACCAGG 59 22791026 22791045 TTCACCACTTGCTTGAAACG 59 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544 1 1 6 80 3R 22084753 22084773 CATCAGAGGGAATTATTGCCG 59 22083748 22084714 AGATTCGAGTGTAGTTCTCGAC 59 NA InUTR Drosophila melanogaster 61 CG34129 FBgn0083965 FBtr0110870 2 1 1 60 3R 22016407 22016425 GGGTTTCGACAATACGGAG 58 22016365 22016384 AGTTACTGTAACGTTTCGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hr96 FBgn0015240 FBtr0084756 3 1 1 88 3R 20851912 20851932 CGCATTTGATCGACTATCCAG 59 20852049 20852133 TTTGGTGAATACTGTCAGCG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 1 6 6 81 3R 20082819 20082910 CACGGTTATCATGGTTCCTC 58 20082757 20082775 TAGTCGACTGTAGATGGCC 58 NA Drosophila melanogaster 61 Tsc1 FBgn0026317 FBtr0084546 1 1 1 80 3R 19959629 19959705 ACGGACAGAACTGACATAGC 59 19959748 19959766 GGATAAGCTCTCGCTCGAG 59 NA Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 1 2 2 80 3R 19822358 19822380 CCGATTGAGTTTAGATGAGAAGG 59 19822420 19822498 TGATCAAAGGCGTGAAGAC 58 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0301491,FBtr0084386,FBtr0084385,FBtr0084384,FBtr0100227 3 6 6 80 3R 19092379 19092454 AAGTCCAAGGATGTTGAAGTC 58 19092319 19092337 TGGGTCAAGTTTCTGGGAG 59 NA Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 1 1 1 185 3R 17694984 17695002 GAACCTGAGATCAAGGTGG 57 17694704 17694781 TAATTCAGCTTGTTGTTCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4424 FBgn0038765 FBtr0083841 1 1 1 80 3R 15852660 15852792 CCCTAGTTAAGCATGAAAGAACC 59 15852602 15852623 TGGCATATGTGAACTTCTTTCC 59 NA Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083860 3 1 3 85 3R 15689905 15690007 TCGTGAGCAGTCGAATCAG 59 15689838 15689858 TTATTGCGACTATAGTCGCGA 59 NA InUTR Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 3 2 2 87 3R 15477479 15477499 GGCTATTCAGTAGCATTAGCA 58 15477548 15477678 ATTCCTGTCCTATAGCGCA 58 NA Drosophila melanogaster 61 CG5863 FBgn0038507 FBtr0083439 1 1 1 60 3R 13237873 13237894 AAATCGTGTTCATCATTGGAGG 59 13237912 13237933 CTCATTACATAATCTCTGGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33967 FBgn0053967 FBtr0100008 1 1 1 80 3R 10525170 10525189 CCAAAGAGATCCACAAGCTG 59 10525049 10525130 AAGTGATCTTCTCCTTGAACGA 59 NA Drosophila melanogaster 61 CG31313 FBgn0051313 FBtr0082982 1 1 1 81 3R 10392722 10392901 TGGTCCCAATTATCAGGTAGTG 59 10392662 10392683 CTTCACCTCGAATTTGTAGAGC 59 NA Drosophila melanogaster 61 Npc2c FBgn0037783 FBtr0082176 1 1 1 94 3R 5886203 5886221 AAATCGACGATTGTGACGC 59 5886278 5886411 CTTCATGGTATTGCGAGTGG 59 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 2 2 2 96 3R 5320656 5320736 GTGGAGGAGAATCCTCACAC 59 5320795 5320813 TTGTATCGACCTCCTCCGA 59 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 3 4 4 110 3R 4547248 4547266 CTCAAGCCATCTCCATGGA 59 4547409 4547427 GGAGTCGAATGTCTCCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11760 FBgn0037615 FBtr0081907 2 1 1 73 3R 4545264 4545284 GACGATCCGATTGATAATGGG 58 4545534 4545552 TGAAGACCGACAGTATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42286 FBgn0259182 FBtr0299666 1 1 1 93 3R 4192156 4192484 GTATGAAATCGAGTTCCCAGG 58 4192083 4192101 TAGTGCTCGTGGAACTCAC 59 NA Drosophila melanogaster 61 CG11671 FBgn0037562 FBtr0081829 1 1 1 92 3R 4113880 4113898 GATCGGAGGACTACTGCTG 59 4113951 4114029 TTGAAATTTCCCTCCGTAAGTC 58 NA Drosophila melanogaster 61 mtg FBgn0260386 FBtr0300601 1 1 1 85 3R 4085351 4085369 CACCTACAAGCTTCTCCTG 57 4085418 4085507 TACGTGGAATACCATGCAG 57 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 3 2 2 84 3R 3612901 3612984 CTATAACTCTGTTTCACAGGTTCC 59 3612840 3612858 CGTTAGAGGATCCGATCGG 59 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0081587 1 1 2 80 3R 3190261 3190339 TTCTAAAGACCGTTGACTTCTC 58 3190202 3190221 GGACCACAGCAGTAATATCC 57 NA InUTR Drosophila melanogaster 61 lab FBgn0002522 FBtr0081696 3 1 1 197 3R 2503020 2503038 CCAACGGTGGAATGAATCG 59 2488697 2502859 GTAGTTTCGGTGCTTGAGG 58 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 1 4 4 80 3R 2182251 2182269 TGGTTCGACAACACTACCA 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 1 4 4 80 3R 1400703 1400973 GATCCTAAGGTATGCTGCGA 59 1401016 1401034 AATGCCGATCTCCTCAGAC 59 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 1 2 2 104 3R 1063869 1063943 TTTCGATCGGCATCAATGC 59 1063783 1063801 CTAGAACACCGTGGTCGAG 59 NA Drosophila melanogaster 61 CG12377 FBgn0037168 FBtr0078545 3 1 1 95 3L 22497514 22497751 TTCGACAACCATGACATGGA 59 22497438 22497458 TCTAGCATGAAGTAGCAGGAG 59 NA Drosophila melanogaster 61 CG7140 FBgn0037147 FBtr0114546 1 1 1 60 3L 22020773 22020792 TACAAGGCCTTTCAAACCTC 58 22020732 22020750 CCATCAGGTAAATCTGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14103 FBgn0036908 FBtr0074927 2 1 1 82 3L 19797504 19797589 TCAATGTGCTTTGGTGGTC 58 19797440 19797459 AATTGTTCAATCGCCAAACC 58 NA Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 1 2 2 84 3L 19678980 19679065 GAAGTCGGTGAAACAGTGTC 59 19678915 19678933 CATCAGTGTCCTCAATCGC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 3 12 12 144 3L 19311993 19312012 CCTTCTTCCTGTTCATGCAC 59 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 CSN1b FBgn0027057 FBtr0075074 1 1 1 275 3L 18897889 18897907 AAATAGAAGCAGGATGCCC 57 18897560 18897578 TTGTAGGTGGTTTGAACGT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MYPT-75D FBgn0036801 FBtr0075049 2 1 1 116 3L 18657814 18657832 CATTCTCACCGAGAAGGGT 59 18657912 18658807 CTATTGGTGTCCACGAGGA 58 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 3 1 1 94 3L 18286583 18286601 AGGGAAAGGACTTTCTGGG 59 18286443 18286527 CATCTGCAAATGCTTGATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 3 3 3 80 3L 17035131 17035212 GAACAAGCTCTGCTAAAGCA 58 17035070 17035088 CGGATGTTGCATGTAGTGG 59 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 3 2 2 80 3L 16621684 16621777 GAGCATCAGTTTGAGATACGA 58 16621624 16621642 TGGGTAACGAAGACTTTCC 57 NA Drosophila melanogaster 61 CG13067 FBgn0036589 FBtr0075465 2 1 1 238 3L 16264443 16264536 TTCAAATACTTCGCTCTGTGC 59 16264736 16264754 TCTTAACGGTAGTAGGCGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13054 FBgn0036584 FBtr0075481 3 1 1 60 3L 16249239 16249257 GGGACTGTATTCCCGAGTG 59 16249197 16249216 CATGTGCTGTAGGGTATACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33985 FBgn0053985 FBtr0100030 1 1 1 92 3L 15519357 15519375 CACTTCCCATGAGTTGTGC 59 15519221 15519301 AAGTCATGGCCAAACACCT 59 NA Drosophila melanogaster 61 CG10222 FBgn0036356 FBtr0075861 1 1 1 60 3L 13404941 13404962 CAAGTTACACTTTAACGTGGAC 58 13404902 13404920 GTCCAGCAGATACTTGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim13 FBgn0036204 FBtr0076089 2 1 1 60 3L 11767282 11767300 CACCTATGGCAATCGTCTG 58 11767240 11767259 GGTCATCTCCAACGATTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 1 2 2 102 3L 11143173 11143247 AAATGTGTTGTGGCAAGAC 57 11143089 11143107 TTGTTGGAGGACAAAGGTG 57 NA Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 1 1 1 83 3L 11114491 11114665 ATTCCTAGGATTCCGGTGC 59 11114712 11114730 CAGACAGTGAATGCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32053 FBgn0052053 FBtr0076315 2 1 1 95 3L 10084473 10084627 CATTAATGGAGTTCTGTTCGCT 59 10084399 10084417 TATATCTCCCTGCCAGCAG 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 1 4 4 98 3L 9893399 9893533 CTCTCAAGCTCAAGTTGGA 57 9893595 9893613 GGTACACCTTCATGGTGTC 57 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323 2 1 5 80 3L 9424366 9424385 GGAACTGGAAACAGCATCTC 59 9424428 9427508 CCTCATCCGAACTCTCGTC 59 NA InUTR Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 2 2 2 80 3L 9406349 9406369 ATTCGAGCTATACGACAACTC 57 9406408 9406502 ATAAAGTTGAATCTGCAGAGGG 58 NA Drosophila melanogaster 61 Fdxh FBgn0011769 FBtr0076498 1 1 1 86 3L 9363791 9363874 CGGATGAAATAGTGAACATCAC 57 9363726 9363744 AGTACAGAACATTGTCGCC 57 NA Drosophila melanogaster 61 rhea FBgn0260442 FBtr0076627 1 1 1 80 3L 8564752 8565129 CGATGTCAAGATTGAACTCGAC 59 8565170 8565188 GATGCTCCCATTATGCCCT 59 NA Drosophila melanogaster 61 CG32374 FBgn0052374 FBtr0076828 1 1 1 60 3L 7534208 7534226 TGGATTCTGGTGGTAGGTG 58 7534166 7534187 TACCGTTGTCTACATAGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16998 FBgn0035795 FBtr0076829 2 1 1 60 3L 7532558 7532577 GGGAGGAAATATTCAGGTGG 57 7532517 7532541 GGTTCGTGGAAGTATATTAAGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF4E-4 FBgn0035709 FBtr0076963 2 1 1 81 3L 6658159 6658178 CCGTTGGGTCATCAATATGG 58 6658017 6658117 GCCAATCAGTATGAGTAGCAC 58 NA Drosophila melanogaster 61 tan FBgn0028980 FBtr0077043 2 1 1 125 3L 6048753 6048824 AAAGACAACAGGTCACCCA 59 6048913 6048931 ATTGTCATCGGATTCGGGT 59 NA Drosophila melanogaster 61 Cralbp FBgn0035636 FBtr0077117 1 1 1 115 3L 5779550 5779569 ACAACGATCAAAGGAATCGA 57 5777554 5777575 ATATTCTGCTTTCCTTCTTCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 2 2 2 101 3L 5758261 5758279 CTCAAGGCGGTAATTGGAC 58 5757887 5758198 TTTGTATACTTTGCCGGTCTC 58 NA Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 2 2 2 84 3L 4291805 4291887 GAAGGGAGAACATATTTCTGATGAG 59 4291745 4291763 CATTAGGAAGCCCACAAGC 58 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073064 1 1 2 131 3L 3320348 3320527 ACTTTATACGCAATCCCATTCG 59 3320619 3320637 CTCTCAGGCTCCAGATGTG 60 NA InUTR Drosophila melanogaster 61 aly FBgn0004372 FBtr0073006 3 1 1 96 3L 3026049 3026067 GTAGATGTTTCGGAGGACG 57 3025908 3025992 GGAAATTGTACAATCTCTTGCC 58 NA Drosophila melanogaster 61 CG34259 FBgn0085288 FBtr0300030 3 1 1 117 3L 2027858 2027878 GACAAATTCCTGAAAGGTGTG 57 2027955 2028030 CAGTTAGGATCATCAAGTCCA 57 NA Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 1 2 2 80 3L 1834920 1834939 TCGTTATCCTTTCGTTGGCT 59 1834674 1834882 TTGGATGATCATAGTAATCCAGGG 60 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 3 2 2 101 3L 1825128 1825147 CTCTGTCTGCTGCATATTGC 59 1824696 1825064 GTAGTGGAGCCTTTCCTCG 59 NA Drosophila melanogaster 61 CG13917 FBgn0035237 FBtr0072747 2 1 1 133 3L 1597421 1597439 ATCTGTACAGGAAGTGCCT 58 1597536 1597626 ATCCGATGTCATGTAAGCG 57 NA Drosophila melanogaster 61 312 FBgn0029514 FBtr0072680 2 1 1 80 3L 1351463 1351539 ATTTAAAGCGAGGTGTTCGC 59 1351580 1351600 ATATGTCGTCCACATTCTCCT 58 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 3 2 2 108 3L 151928 151946 ACAATGGTAGCGAAGAGCA 59 151781 151860 CATAAAGTATCCCGTTCATCAGG 59 NA Drosophila melanogaster 61 Uhg1 FBgn0045800 FBtr0086842 2 1 1 80 2R 13586925 13586946 CAAATTTATCCACACGTGTCTC 58 13587395 13587596 CTTCCGTCTATCTTTGCCG 58 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 1 2 4 80 2R 20443081 20443813 CACCGATTATGCAAGAAAGAC 57 20443853 20443873 TTCCTCTTCGGGTATTAACAG 57 NA Drosophila melanogaster 61 spag FBgn0015544 FBtr0072256 2 1 1 81 2R 20048323 20048341 GTCAATACCGTGCAAACTG 57 20048385 20048461 GTAAGAAGCGCTCTATTGGA 57 NA Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192 2 1 2 60 2R 19921091 19921215 CGACATACAGACAAGCCGA 59 19921049 19921067 CCTACGATTCATGCCTGTG 58 NA DesignRelaxed Drosophila melanogaster 61 or FBgn0003008 FBtr0072152 1 1 1 81 2R 19856023 19856100 TCCTCTCAGAACTGGTAATGG 59 19856143 19856161 TTGTTCTGCTCCTCGATCC 59 NA Drosophila melanogaster 61 bgcn FBgn0004581 FBtr0072232 1 1 1 84 2R 19741946 19742025 ATGTTCTCGGGACATCCAC 59 19741880 19741898 TAAAGACGTTCACGTTGCG 59 NA Drosophila melanogaster 61 CG5398 FBgn0034882 FBtr0072071 1 1 1 82 2R 19490755 19490773 GAAACGGAAGGTTCCTCGA 59 19490818 19490901 AGTTAGTTGAATCCCTGCGA 59 NA Drosophila melanogaster 61 CG34371 FBgn0085400 FBtr0112596 3 1 1 83 2R 19060518 19063683 CCATCTATACCTTTGATGCGC 59 19060455 19060473 GGGCCTTCTTGTTGAACAC 59 NA Drosophila melanogaster 61 CG9825 FBgn0034783 FBtr0071893 2 1 1 81 2R 18725372 18725450 GAACTTTCCGGAATACGATTGG 59 18725492 18725510 TTGCGTTAGGATGTAGCCC 59 NA Drosophila melanogaster 61 CG4610 FBgn0034735 FBtr0071834 3 1 1 60 2R 18380671 18380691 GATTGAGTCCAAGATCCTGAG 58 18380713 18380731 TTCTGGCTCTAACCACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849,FBtr0071852,FBtr0071851 3 3 4 132 2R 18188500 18195722 CTTATAGAAGATAAGACGCCAAGAG 59 18188392 18188411 GCAACCACAATGAGGAACAG 59 NA InUTR Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415,FBtr0300482 2 3 3 83 2R 14914734 14914752 ATTTGGTTGCATCTCTGGC 58 14914213 14914690 CATTACTTATCTCGTAGACGGC 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415,FBtr0300482 1 3 3 80 2R 14913885 14913904 GGATCCGGATTACATGAAGC 58 14913507 14913845 CAGGTGGCAAATATCTGATAGC 59 NA Drosophila melanogaster 61 CG17821 FBgn0034383 FBtr0086642 2 1 1 124 2R 14632193 14632211 GGATTTATTCCGAGGGCTG 58 14632037 14632055 TCATGAAATCGGGTCCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 2 3 3 60 2R 14546455 14546476 GTATCGATACGCTTTAGTCAGG 58 14546353 14546439 GAAAGTGCCTTGTATAAAGAGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33017 FBgn0053017 FBtr0087135 1 1 1 142 2R 12160132 12160213 TTGGGAAACTTGGAGGAGG 59 12160319 12160337 TTGTAGAAGGTGTACCCGC 59 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370,FBtr0087369 1 2 2 80 2R 11144983 11145002 TGGATCATTATTGTGTCCGT 57 11145042 11145127 GAAGAAGCCAAACTTGTATAGC 57 NA Drosophila melanogaster 61 Obp50b FBgn0050073 FBtr0087552 1 1 1 83 2R 10258885 10258908 CAAATCCTTTCTGGATAAGTTCCC 59 10258950 10259022 CATTCATAGCGGCAAGGAC 59 NA Drosophila melanogaster 61 CG13016 FBgn0033899 FBtr0087519 1 1 1 80 2R 10045631 10045718 GGCATATGGTGAACATCGAG 58 10045761 10045779 AGTAAATCAGTCTCCGCGT 58 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860 1 1 3 60 2R 8648241 8648262 GAAATATCAGTGAATTAGCGCC 58 8647997 8648016 CTTGATTTCGGTCAGTTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8520 FBgn0033734 FBtr0087926 3 1 1 111 2R 8311606 8311683 GTACCCAAATTCATCGAAAGC 58 8311756 8311774 TTAAAGGCACGGTCAACAG 58 NA Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112425 3 1 2 181 2R 8052991 8053138 TGTTGAAGGCGATTATCGT 57 8052828 8052848 ATGTTTCAGACTATCATGGCC 58 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 1 4 4 80 2R 7531188 7531206 GAGTGCAGCCAGATTACAG 58 7531066 7531146 GTGCGATAGGGTCAATTTCTC 59 NA Drosophila melanogaster 61 thetaTry FBgn0011555 FBtr0088162 2 1 1 60 2R 7229704 7229725 GAGGTCTATGTCAACATTGTGG 59 7229665 7229684 CTCCGTACTTGTACTCATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 1 5 5 80 2R 7202397 7202415 GATCCCGATATCCCACTGG 59 7202222 7202357 GATACCGATCATAATCATCAGGG 58 NA Drosophila melanogaster 61 CG9080 FBgn0033593 FBtr0088191 3 1 1 70 2R 7129534 7129552 TGATGGCACTGGAGTTAGG 59 7129482 7129500 CTCCACAGCAATATCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088487 1 1 4 90 2R 5717354 5723955 AACAATTCAGCGAACGACG 59 5717282 5717300 GTTGTTGATTGTCTCGGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 dpn FBgn0010109 FBtr0088803 1 1 1 89 2R 4119187 4119436 CTTAGAAAGACCAACAAACCGA 59 4119119 4119139 CTCCAGGATAAGGGACTTCAG 59 NA Drosophila melanogaster 61 CG34217 FBgn0085246 FBtr0112410 2 1 1 60 2R 4116081 4116101 AAGTGTTACTAACTGTGGCGA 59 4116041 4116061 CCATCTTCAGAACTAGATGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cathD FBgn0029093 FBtr0088898 3 1 1 115 2R 3709985 3710066 CATCGGTGGTCAGTATGTG 58 3709888 3709908 CCACACGGAGAATATAGTCCT 58 NA Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 1 1 1 121 2R 2703972 2703990 TCTGGTATCCCACCAACAC 59 2704075 2704147 GTACACCAACGAGTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17994 FBgn0033072 FBtr0086001 1 1 1 100 2R 2096349 2096367 AATTCCTCAGGATCGTCGA 58 2095779 2095797 CGACGATGGAAAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Me28S-C2645a FBgn0082938 FBtr0113556 1 1 1 60 2L 20647821 20647842 CCATGATGAAATCGTTAGATGG 57 20647858 20647881 CTACTATCGAGATGAATCAGTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31677 FBgn0051677 FBtr0081407 1 1 1 60 2L 20603966 20603987 TATGGCCAATATTCCAATCCAC 58 20603927 20603947 GTGTGGCTCTTTGTATCTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10721 FBgn0032846 FBtr0081333 1 1 1 60 2L 20092581 20092599 GACTACACGTGTGATTCGC 59 20092623 20092641 TTTCATCCACCGATATGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 2 2 4 196 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387582 19387600 AACCGATAGATCCGGAAGC 59 NA Drosophila melanogaster 61 dnt FBgn0024245 FBtr0081224 1 1 1 80 2L 19340926 19362669 GCGTTTATTAGGCGTCTCTG 59 19340865 19340886 GGTACAATGAAGTTCAAAGCGT 59 NA Drosophila melanogaster 61 l(2)37Cd FBgn0086445 FBtr0081156 3 1 1 108 2L 19127558 19127576 TATCCATAACCGTGAGGCG 59 19127647 19127723 TCACAAAGCGTTTCAAAGGT 59 NA Drosophila melanogaster 61 CG10428 FBgn0032724 FBtr0081132 1 1 1 80 2L 18949827 18949847 GAATTGTCTTCCAACATTGCG 59 18949889 18949959 CGAAAGAGTCGATCTCGCT 60 NA Drosophila melanogaster 61 CG15155 FBgn0032669 FBtr0081048 2 1 1 81 2L 18155000 18155018 GCTGAAGGATGTGCAAGTC 59 18155057 18155140 CACAAATATCTGATAGTGATCCACG 59 NA Drosophila melanogaster 61 CG31816 FBgn0051816 FBtr0080868 2 1 1 85 2L 16542725 16542744 ATAATCTTACCACCGAAGCG 58 16543001 16543019 CAAGTGCGACATCGATACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5781 FBgn0032448 FBtr0080409 1 1 1 60 2L 12697216 12697236 GGATTTAAGCAATGAGTCCCA 58 12697176 12697194 ATCCAACTGGTCGAATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6488 FBgn0032361 FBtr0080248 2 1 1 80 2L 11497782 11497800 GTTCTTTAAGACCGCTGCA 58 11497662 11497739 AGTCGCTGATCTTATTGTGC 58 NA Drosophila melanogaster 61 CG6201 FBgn0032343 FBtr0080229 2 1 1 86 2L 11112427 11112506 TAACCACCAGATAGCACGA 58 11112359 11112377 TTATACCCACGAAGGTCCG 58 NA Drosophila melanogaster 61 CHIP FBgn0027052 FBtr0080027 1 1 1 84 2L 10438621 10438641 GGCCAATTTAAAGCTGAATGG 58 10438687 10438764 ATGGTCATCGCATTCTTGC 59 NA Drosophila melanogaster 61 CG5355 FBgn0032242 FBtr0080047 3 1 1 80 2L 10411474 10411494 CATGTCTGCTTTACGGATACG 59 10411347 10411433 TGTCGATGAACATAAGCCCA 59 NA Drosophila melanogaster 61 Cpr30F FBgn0051876 FBtr0079897 2 1 1 63 2L 9932926 9932944 CATTGTGAAGCCACTGCTG 59 9932881 9932899 GTAGGCGAAATCGTAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0301855 1 1 5 116 2L 9257194 9291061 ACTCTTGTGTCTGAATGCG 58 9291140 9291159 ACATAATAACGCATTTGCCC 57 NA InUTR Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 2 2 2 85 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935749 8935896 ATTACGCCAAAGAACTGGAG 58 NA Drosophila melanogaster 61 lectin-29Ca FBgn0040098 FBtr0079715 1 1 1 60 2L 8393743 8393762 GGGTAGATATCAACAGCCGT 59 8393702 8393724 CTTCCGGATAGTGTAGAAATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED20 FBgn0013531 FBtr0079544 2 1 1 60 2L 8072130 8072149 GACACCGTGAAACAATACCT 58 8072089 8072109 CCATAAGAGTCACATGCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18585 FBgn0031929 FBtr0079516 1 1 1 80 2L 7690221 7690240 GCCGATAACTATGATTGGCA 58 7690096 7690180 CCACATACGATCCTTCTTGTG 58 NA Drosophila melanogaster 61 CG42368 FBgn0259714 FBtr0299967 2 1 1 80 2L 6391338 6394848 GGATCCTATAAGGTCGCGT 58 6391276 6391294 TGGATTACGCGTTATCACG 58 NA Drosophila melanogaster 61 Fbw5 FBgn0031773 FBtr0079215 1 1 1 80 2L 6065239 6065313 ATATGTGATAATCTGGAACGCC 58 6065180 6065199 GAGTACTTCCAGCTGAACTG 58 NA Drosophila melanogaster 61 CG9117 FBgn0031766 FBtr0079222 1 1 1 60 2L 6037515 6037533 AAGGCACGAATGCATTTGG 59 6037473 6037491 GGTGGTCCATGTAGAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art2 FBgn0031592 FBtr0077476 1 1 1 82 2L 4279135 4279153 GTTGAAGGATTCAGTCCGA 57 4279013 4279089 CATCCAGGACAGTCTTGTG 57 NA Drosophila melanogaster 61 CG15408 FBgn0031523 FBtr0077587 1 1 1 93 2L 3334373 3334394 CATGTCCATGGACATCTTTCTG 59 3334448 3334534 CTTGGCACGAATCTTGACG 59 NA Drosophila melanogaster 61 CG17261 FBgn0031501 FBtr0077656 3 1 1 151 2L 3043094 3043189 ACGCAAATGTGCTCTTCTG 59 3043304 3043322 GTCTTGGTCATCGAGAGGA 58 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 1 4 4 85 2L 1085132 1085214 CCAACTCATCAATGGTGCC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 Lsp1beta FBgn0002563 FBtr0078025 2 1 1 115 2L 898836 898854 GCAGAAGTTCCTCTTCGAG 58 898931 899019 TGTCGTAGTGAGTGTAGTAGG 58 NA Drosophila melanogaster 61 KH1 FBgn0086130 FBtr0078009 3 1 1 107 2L 812489 812572 GATTTCCCTTCCACTTGGT 57 812641 812661 CGTCTATGACTTTGTGAAGGA 57 NA Drosophila melanogaster 61 CG31920 FBgn0051920 FBtr0078097 1 1 1 80 2L 328642 328660 CAGGGATCCCAAAGATCCA 58 326049 328600 CAACCACAAACTTCATCTCCT 58 NA Drosophila melanogaster 61 CG33127 FBgn0053127 FBtr0078052 3 1 1 60 2L 322562 322581 TGAGAGCTTCGAGTACAACG 60 322604 322622 ATCATCATTGATGTCGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U2af38 FBgn0017457 FBtr0078133 2 1 1 81 2L 294491 294509 GCAACACCACAGTAAAGCC 59 294360 294446 CGAACAGTTCACCTTGTCC 58 NA InUTR Drosophila melanogaster 61 CG11377 FBgn0031217 FBtr0078104 3 1 1 105 2L 103342 103360 GTGATCGATCTTGCGATGG 58 103427 103528 TCCGCAGAAATATCATGACAC 58 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 2 2 2 123 2L 156338 156430 TCCTTGAATCGGGAGTGAG 58 156514 156535 CCAGAAGAAAGCAATAACTCCC 59 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 3 2 2 116 2L 450530 450673 TAGAGGATGGCCTTACCCT 59 450432 450450 TTATGTCCTCGGGATTCGT 58 NA Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 1 2 2 60 2L 1354677 1354697 GGCTGCTCTAATCGTAAACAC 59 1354637 1354655 CTGGTTCTCAAACTCCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 1 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938580 TTGATCCATCCAAGTTGGC 58 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 2 3 3 85 2L 1985977 1985995 CCTATCGCGATGACAACAC 58 1985848 1985866 CTTGTCCAGACTACGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830 1 1 2 90 2L 2152103 2152121 AAGGCTATTGGGTCCAGTG 59 2152259 2152671 AGCAAAGCCCATTTGATAGAG 58 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 3 4 4 89 2L 2223626 2223718 AGATTACGAGACAAAGACAGTG 58 2223767 2223786 CTTGATAAGCAGAGCTCGAG 58 NA Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 3 2 2 116 2L 2309692 2310136 GATTTCCTCAACGATTACAGCA 59 2309597 2309615 ATTATCATCCCGCCGATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 2 2 2 98 2L 2753624 2753642 AAAGGAATCCGTGAAAGGC 58 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 1 2 4 85 2L 2793385 2793404 GAACCAAAGATGGAAAGGGT 58 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077683 1 1 4 110 2L 2882826 2882930 AATATAAGCTGCTGGCCAC 58 2882734 2882752 GGAAGGAGATCTTGAGGCC 59 NA DesignRelaxed Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 2 5 11 179 2L 3626211 3626349 GAAGCAGAGAAGGATGGAC 57 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 1 4 11 179 2L 3626210 3634250 ATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 1 4 9 80 2L 3884509 3886994 CAATGAATCAGGAGTCACAGG 58 3884449 3884468 ACAGTTGATTGCGTTTCCAG 59 NA Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 1 2 2 86 2L 4434740 4434858 GGAATGCTGTTTACGTGTG 57 4434907 4434926 ATCTGGATAATTGGCATCCC 57 NA Nonspecific Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 2 2 2 152 2L 4837523 4837610 GCGATAAAGAACATCACCCT 58 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 3 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301907 3 1 6 121 2L 5044629 5044648 CTGTAGGAGGCTAGATTCCC 58 5042879 5044545 TTTCGCCTGCTTGTTTCAC 59 NA InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0079035 2 1 6 295 2L 5042877 5043085 ATGTATAGCAGGCGAAAGG 57 5042600 5042618 CTTCTCGTGCTTGTGACTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 3 2 2 82 2L 5845882 5845900 CTTTGATCGCACCGATGTG 59 5845942 5848353 CAAGGAGGTTACCAAAGAAACAG 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 1 3 3 105 2L 5947159 5947245 GTCTGGAGGACAAATTCCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 2 4 4 111 2L 5984933 5985036 ACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 1 3 3 183 2L 6049172 6049190 AACTACTGCTTCGAGATCG 57 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079250 3 1 2 98 2L 6342338 6342735 CTATTCCATACAACCCACCAC 58 6342795 6342813 TAGAAGACGACCAGACTGC 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 2 3 6 121 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 1 3 6 80 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688667 6688685 GAGGATCTGTCTAGGCAGC 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 3 2 2 136 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018952 7018972 TGACCGTATTTCAGATCTCCC 59 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 1 4 4 80 2L 7403301 7403319 CTGAGAAACAAGTGGCACC 59 7403357 7403561 GACTTTCAGAAATTAGATACCCAGG 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605,FBtr0112603 2 2 4 148 2L 7501515 7536282 TTTCTCAGAACCACCATCG 57 7501385 7501403 CGAGTGATTCATCGAGTGG 58 NA Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0079641 1 1 2 86 2L 8140773 8159231 ATCTTGAATCGCGAACCGA 59 8140705 8140724 CAAGTTAATCTCGTCGAGCG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0301338 3 2 9 103 2L 8223337 8223835 GAACTGCACCGAAATTCGG 59 8223252 8223271 CAGGTATCCATCTGACGGTC 59 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 2 2 2 85 2L 8364198 8364216 CAAGAAGGGTCTGACTCCC 59 8364069 8364087 TGTTTCCGTTGACGAAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 3 1 1 91 2L 8376672 8376690 CAACTACTGTCAGGTGGCA 59 8376533 8376551 GTATCCTCTTGGCATCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 1 4 4 95 2L 8536986 8537004 AATAATTCGCTGACGGTGC 59 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079748 3 1 4 137 2L 8690246 8691025 CATCCAGTGACGAATCGGA 59 8690127 8690145 TACTGTTGCTCAGTCCCAG 59 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 1 3 3 80 2L 8938686 8938704 TTCATTCTGATCGCAGTGG 57 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301040 1 1 4 186 2L 9135376 9148764 CCCGATATGGTGAGTTGCA 59 9156505 9156523 AGTAGTCACGAGTGAGCAC 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079818 2 1 2 171 2L 9252774 9252792 TCTGAAGATGCCCGAAGTG 59 9252337 9252640 CTCTGTAAGGTAGCCTTCGT 59 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 2 4 5 81 2L 9535892 9535998 CACCACTATATCGATCACTCC 57 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 1 3 3 82 2L 9549654 9550211 AGGTTAAGGACTGGTTTGTG 57 9549591 9549610 GTAGACAAATAGAAGCGCCA 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 3 3 9 197 2L 9906105 9906123 GAATGATACGCGGAAGGTG 58 9905074 9905883 TAGTTTAGCTTGGGAGGCC 59 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 2 5 5 80 2L 10296849 10296947 GTTTCTAAAGCTAAGCTCGGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 1 2 2 60 2L 10300353 10300371 CTAAGTCCACAGGAATCGG 57 10300311 10300332 ACTGAAATGGTATGGAGAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 1 3 3 80 2L 10464362 10464381 ATCCATGTTCAAGAGCACCA 59 10464239 10464320 TCGCTATGATGAACAACGGA 59 NA Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 2 1 1 119 2L 10653245 10653263 CATACGCCAGGAATCACTC 58 10653494 10653514 CACAATGCACAGTAGTTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0290007 3 1 2 98 2L 10918981 10923159 CTGAATGTCATAGTAACGCCG 59 10918903 10918921 GTGACAAGTGAGCGTTACG 59 NA Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 3 3 3 154 2L 11524691 11524710 TGGAGCCACCTATTATCCAC 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 1 1 1 77 2L 11935188 11935207 ACTCATCGAAGGTATCCAGG 58 11935320 11935340 TGGCTAAGATGTAAAGTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18789 FBgn0042127 FBtr0080315 2 1 1 60 2L 11994169 11994190 AAATCCAGTCCTCAGTTTACAG 58 11994130 11994148 AATGCTTCGATTTCCTGCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 2 2 2 87 2L 12060790 12060876 AACAACTGTGATGAAGTAGTGG 58 12060724 12060742 CATGGATGTGTTCACCAGC 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 1 3 4 80 2L 12407461 12407565 CACTTCCACCATTAAGGTTGTC 59 12407402 12407423 TTAAAGACGCTGTTGCTATCAC 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 2 2 4 92 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404100 12404118 GGAAGCTTCGAATTCGGAG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 2 2 17 136 2L 12726994 12727012 AAGCTTTCCAAATCGGCTC 58 12727111 12728591 ATACCCTGTAACAACTTGGC 57 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 3 3 9 176 2L 13274016 13274036 AGAACTTCGGATCAAATCCAC 58 13274365 13276255 CTCCATTACCACCAAAGTTGG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 2 3 9 88 2L 13274369 13276259 CTTTGGTGGTAATGGAGTCTC 58 13276395 13276413 TTGGAGGCACATATTGCTG 58 NA Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 1 2 2 82 2L 13387100 13387184 TTTAGACGGATTGGAAAGTCTG 58 13387039 13387057 CTGTTTGTGCTCGATCGTC 59 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 3 5 5 81 2L 13634166 13634247 GTGTTCACCTACAGAGATTTCAC 59 13634288 13634306 AAATTCCACCAGAGGCTCC 59 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 3 5 5 80 2L 14189225 14195743 GAGCTAATGAGCTTGAACCT 57 14189164 14189182 GAAGCGTCGTATGAGACTC 57 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 1 5 5 80 2L 14324567 14324587 CGTAAACATTCACTTGCTTCC 58 14324629 14324703 GTTCCCGAAGTGAAACCTG 58 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 1 3 3 104 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 CG31775 FBgn0028537 FBtr0301739,FBtr0080691 2 2 2 60 2L 14737529 14737548 GTGGATTTGGTGATCAGCAG 59 14737488 14737506 AATCCACCTCCGAATCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080714 2 1 2 119 2L 15246262 15246280 ACCAGGTGTGAACGTAGTC 59 15241509 15246179 CAATGATCCCGGACTTCGA 59 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 3 2 3 97 2L 16044331 16044351 GATCGACAGAAATTGGAACAG 57 16044470 16044804 TCCGTAGTGTTCATGATGTC 57 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 1 4 16 103 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080904 3 1 16 100 2L 16771052 16771070 AGAAGGCTCGTGTCATCTC 59 16771130 16771952 CAGACAGTATTCTTTAACACCGG 59 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 3 1 1 74 2L 17012697 17012715 TTATGTTGCCGTGGAAAGG 58 17012580 17012600 TCGGTAGAACTATGTAGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 1 4 4 107 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856752 18856772 CATATAAGGATGCTCCTTGCC 58 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 3 3 3 87 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067438 19067458 GTGATCCGGAAATAACATAGC 57 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081232,FBtr0081230,FBtr0081229 1 4 4 125 2L 19183415 19183433 TTAGGATACCCTGAACGCT 57 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 3 2 2 68 2L 19418377 19418396 CTACGACAAGTACACCACAC 58 19418489 19418507 AAGGGAGTCATGTCAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720 3 1 4 156 2L 19902177 19907771 GATGTCAGAAGACAAATTGCC 57 19907889 19908773 CAAGTCCCGGTATTGATGG 58 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081390 1 1 2 80 2L 20677479 20677556 GAACGATAGCTAAAGCATTCCC 59 20677596 20677615 ACTGAACATTGTTGTCGTCG 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081511 2 1 4 91 2L 21297159 21297177 CATGTTACGCACTAATGGC 57 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 1 3 3 92 2L 22428911 22428929 TACAGATCGCCTATGCTCG 59 22428777 22428855 TCAATCCAACCTGGATCCC 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 1 4 6 103 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737574 22741714 AAAGCCAGTTGACTCTCGT 59 NA Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 2 2 2 65 2L 22842560 22842636 GTGTGAAAGTTCAGAACATTCC 58 22842516 22842534 TTTGACGTTGAGTTCGCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 1 4 4 81 2R 705342 705360 TATATGCTGTCTGCGGGAC 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504 1 1 4 82 2R 1605264 1613339 CTGTGATGCATTGGCAGAG 59 1605200 1605218 CCCTTGATGTGCTACAGGT 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301421 1 1 7 129 2R 2625567 2625585 GAGTGCTCGATTTCCTCAC 58 2613523 2625477 TCTTCTTTGTAGAACAGAACGG 58 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 1 3 5 122 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 2 2 11 109 2R 2764805 2764824 AAATGCTACAAAGTCCGGAG 58 2764021 2764733 CATAAACATACCCGTGGCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111055 3 1 59 94 2R 3239488 3239506 TACAAGCTCATCGAGGTGC 59 3236472 3239433 TTGTACCATCTAATGATGGGCA 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 2 2 6 143 2R 3517706 3517724 TACATCTGCCTCATGGAGC 59 3517830 3521736 CTTATTGGCTAGTTTGCCCA 58 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837 3 1 3 83 2R 3592966 3592984 AAAGGCTGAAACAACTGCA 58 3590737 3592923 CTGATATTCGTAGCCCAATACTG 59 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088889 3 1 2 163 2R 3803412 3803433 TACTGCTGCTTATTATGAGGGT 59 3802679 3802909 CTGAACCAACTCGAACAGG 58 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 1 2 2 80 2R 4014509 4014583 ACCTCTTCAGCTTGAAGGAC 59 4014448 4014469 TCAACACTTTGATAGACTCCCT 58 NA InUTR Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 1 4 12 80 2R 5003945 5004691 ACCAAGTACAAGGAATGTGAG 58 5004732 5004751 GATGTTCAGAAACGACAGGA 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 3 3 10 81 2R 5155478 5155888 GAGATATCTGCAGAAGGCG 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 1 1 1 60 2R 5283270 5283291 ATCACGGAACTACATTAAGCAG 58 5283177 5283195 CTCCTCCAGAGTTTCAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 3 2 2 80 2R 5289963 5289981 ACTACAAGCACCACTGGTC 59 5288641 5289919 AGACATAGTTGGCCACGAC 59 NA Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 3 1 1 61 2R 5636331 5636350 TTTGGTTCTTTCAATCGCCC 59 5636428 5636448 ATTCTATTCGACATTCCAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 2 2 4 80 2R 5782126 5782146 CTAAGCGATGAAAGTTGTCTG 57 5782187 5782261 TATTGGTCTGTTCTCTTCGG 57 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 1 2 4 80 2R 5782125 5782146 CCTAAGCGATGAAAGTTGTCTG 59 5782185 5782263 GCTATTGGTTTCTCTTCGGTG 59 NA Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 3 2 2 109 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848344 5848362 GAAGATTACCACGTTGCCG 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 2 4 5 83 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949139 ATTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993882 5993901 TCTGGCCCTTAACTTCTCAG 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089347,FBtr0089357 2 2 26 199 2R 6419772 6419791 CACGATGAGAATGTTGAGGA 57 6371745 6419549 TTCCTGCTCAAATCTTGGG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089353 2 1 26 119 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6405691 6419548 CCAGGTTAGTACGAAATCTTGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 2 5 12 89 2R 6449615 6449634 GACATTATCTTCACCGACCT 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 1 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 1 4 5 80 2R 7199287 7199308 CCTAATCACAGCCATTATCCTG 58 7199176 7199246 CAGTAGCGTCTGTATCCCA 58 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0113066 3 1 3 89 2R 7469645 7470535 GAGCATTATGAAAGCGTATGCA 59 7469577 7469595 TGCTGTTTCTTCGAGGGAG 59 NA Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 3 1 1 287 2R 8113209 8113229 AACTGTACAATGGCTTTGGAG 58 8112483 8112505 AAGCATAGGGATTACAGTAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 1 4 4 135 2R 8641313 8641405 TTCATGTTTGGCAAGTGCA 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 1 2 2 80 2R 9022188 9022271 CACCTATATGGATAAATTCTGCCAG 59 9022308 9022327 AGGAGCATGTTCTGGAACTC 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087704,FBtr0100656 1 2 6 136 2R 9333087 9334646 CAACATTCTGCACCAGTCC 59 9332561 9332579 CTCCAATTCGCGTACAGAG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 3 9 15 147 2R 9759602 9759621 CGTGGAGAAATTGATCGAGG 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 3 3 3 82 2R 9835606 9835691 TCCGTGCCAGATATCATCTG 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523 3 1 2 80 2R 10056544 10056562 CTCCTTGCTTTGGAGAAGG 58 10056603 10056907 CGAATATACACTTAGCCTGACC 58 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 1 4 4 83 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 1 4 7 84 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 1 2 2 96 2R 10720449 10720684 CATCGGCTAATGCTCTTCTG 58 10720743 10720761 TGCTGATCACATCCTCCTC 58 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 3 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 1 4 7 161 2R 11669313 11669331 TATTGCGGAAACACTCTCG 58 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 CG30100 FBgn0050100 FBtr0087140 3 1 1 133 2R 12179200 12179218 GTGGAAGTGGAATTCAGCT 57 12179370 12179388 GTCCAGATTGGACTTGCAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 1 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628 2 5 6 89 2R 12901224 12901304 TCATCGAAGATGTCACTCCA 58 12901154 12901172 GAGTGGATTCTATGCTGGC 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 3 7 9 81 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958997 12959240 CTTGAGCTTGAGTGTTATCACTG 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 3 2 3 81 2R 13359056 13359074 GCAACAATGTCTTGGGTGG 59 13359118 13359207 TGTGAGCTCCTATAGCTGTG 59 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 3 5 5 182 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400435 13400455 GACTAAGGAACTCAGAGTGGG 59 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 2 3 3 84 2R 13577311 13577388 TGATCTTGAGATCCAACGAC 57 13577435 13577453 ATCTGATGGGTAGGTTCCT 57 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0299707 3 1 7 200 2R 13705037 13705055 TCACCATGGTCACCATCTC 59 13705219 13708516 TTGAGCTTTCCACTCCAGG 59 NA Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614 3 1 5 218 2R 13745128 13745146 TCAATCCTACCGCTTTCAG 57 13746786 13746806 GGTACATTCGTATCGTGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 1 6 6 129 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175124 14175142 ATATTCCACTCGTCCTCGT 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 3 3 6 81 2R 14169393 14169478 CAGCAACAGATGATAGCCA 57 14169330 14169348 GATTTGAGTTGGGCTCCTG 58 NA Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 3 2 2 91 2R 14182689 14182764 ATGAGGAAACGATGGTTGAG 58 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086688,FBtr0086684,FBtr0086687,FBtr0086689,FBtr0086686 3 5 8 191 2R 14309051 14311643 GGAGGACCATAATACAGCCA 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 2 2 3 151 2R 14320264 14325081 GGCCTACAAGTTCCAGGAG 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 3 4 4 80 2R 14363666 14363685 GGCTATGTTGGTTAAGTGGT 57 14363163 14363625 ACGTTCATAAGGCGATAATCC 58 NA Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 2 1 1 126 2R 14552771 14552791 GTCTCAAGTCGACAATATTGC 57 14552608 14552627 ACAAGCCGTAATATAAGCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 1 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587568 14587587 TGTTTGATAGTGTATCGCCG 58 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0089970 1 1 2 100 2R 14744460 14744478 TTCATCCCTCTCCTGACCA 59 14744186 14744396 TTTGAAGAGCCCTGAGACC 59 NA Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 2 2 2 80 2R 14865374 14865393 CGCCAATTCGCTATATTCTC 57 14865434 14865529 GGATTGAGACGGAAATATTCG 57 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 2 11 12 183 2R 15061856 15062087 CCGAATGCATTTAAGGTCGAG 59 15062232 15062250 AATCGATGAGAGGCTCACC 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 1 7 10 80 2R 15295681 15295699 CGTCACAGACGATGAACTC 58 15295551 15295639 GTGTCGGTATATTCACCATGC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 2 2 19 86 2R 15359174 15359192 GTTTGAGGAGGACGAACTC 57 15359241 15360333 ACTAGAGCTTCCGTCTTACC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 1 11 19 81 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 1 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 3 6 15 95 2R 16907280 16907298 CTGAATGCCACGAAGAAGG 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350 2 1 4 107 2R 17213144 17213704 CGCAACAAGGTCACATACC 59 17213772 17213793 CCAAAGGTACAGAAGGATTTCC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 2 2 6 126 2R 17286779 17286797 GATCCGGACTATTCTGGCT 58 17286080 17286690 TATGAGCTGTGTTTATGCCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 1 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299572 2 1 3 80 2R 18646903 18647280 AGAGCTTTCTCGATCTAGGA 57 18646842 18646860 TGAAGAAACCTTGTTGCGA 57 NA Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 2 2 2 99 2R 19245612 19245630 CAGAAGACTCTGGACCACG 59 19245693 19245772 CGTCTGCAGTCTTGTTCAG 58 NA Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 3 2 2 128 2R 19272687 19272707 GCCTATTCTCAAATCCATGGA 57 19272459 19272532 CCAAGCGTACTCTCATGTG 58 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 2 2 3 103 2R 19279422 19280900 ACAAGGAGACCTGGATCCT 59 19279337 19279355 GGAGAGGAAGGTCTTGCAG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 1 2 2 61 2R 19776670 19776690 CCAGAACGATAAGGAGTTTGC 59 19776629 19776647 GATTGGAACAGCCGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 1 2 2 107 2R 19868171 19868190 AAATGACACTGAGCATGGAC 58 19868260 19871076 GTTTCTTGGTTCGAGTCGC 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 3 6 6 82 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 3 2 2 86 2R 20569796 20569814 TTCATAGTCGTAGGCACCC 58 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 1 1 1 130 2R 10177916 10177934 AACTGGAATCTGGTTTCCC 57 10177768 10177788 CCGTGAACGTGAATAATATCC 57 NA DesignNoJunction Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 1 3 4 86 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510694 10510712 AACAGAAAGTGGCACAGGT 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 3 9 9 80 3L 142813 142833 CTGCTTAGTGCAGAATTAGGC 59 142873 142956 CAGGTCGAAAGAGTTCTTTGC 59 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 1 3 3 80 3L 185060 185138 ACATCTTTCAGTACGCTGG 57 185180 185200 CCACCAATTTAGGAGCTAGAC 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 1 3 5 100 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235422 235440 TATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112909 2 1 6 145 3L 984148 984166 GAACTACACGTTCTTGCCG 59 984274 985378 CATTGGCATTATCCTCGCTG 59 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 2 2 3 103 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1269142 1269160 CGAGGTAGTAGCGCTTCTC 59 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 1 3 3 75 3L 1299144 1299162 CTGTCTACGGCTTCATGGA 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 2 4 4 81 3L 1326067 1326085 CCTCGAGAACTACCAGAGC 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 3 2 2 198 3L 1624585 1624677 TGTAATAGGCATGTTTCCCTG 58 1624407 1624425 GAAGAGTTGCAGTCCACAG 58 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 1 2 2 80 3L 1769509 1769597 TTGCCGAGCTTATGAAATGC 59 1769448 1769466 GCTCAAGGTACTCGAAGGG 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793 2 1 2 88 3L 1761962 1762133 CAGCATTGTGATCCTTGCC 59 1761892 1761911 CTATCTTAGCCACCGTCTCC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 3 1 3 159 3L 1803558 1803803 ATCAGTCAAGCTCTGGACG 59 1803926 1803944 CATATTCATGGGCGTGGTG 59 NA Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 2 2 2 82 3L 2245006 2245083 TGCGATGGACTTGATACTG 57 2245129 2245147 TCAGGACAATCACAACGTG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 1 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 4 5 163 3L 2607829 2607847 ATTGATCCGAATGTGCAGC 59 2604271 2607704 ACGTTGTTTCTGATGGTTACC 58 NA Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 2 2 2 80 3L 3043322 3043343 ATTGTGAAGCTATCATTGTCCC 58 3043382 3043453 GCATACAAAGGTGAAGTCCAG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0113129 1 1 15 86 3L 3078044 3083751 TATACGGCTGCTATGGATCC 59 3083800 3085212 CGGCGTGACCATATAAGTG 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072994 2 1 15 87 3L 3078044 3083751 TATACGGCTGCTATGGATCC 59 3083798 3084817 TCTGTCGATTCATATAAGTGGC 58 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115 2 1 5 104 3L 3131198 3142839 AGTGTCTTCACGAGTTCCG 59 3131112 3131131 TATTATGGGCATCGTCAGCA 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 1 2 2 121 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191879 4192202 TGCTCAAGTTTCCTTGCAC 59 NA Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 1 2 2 60 3L 4405802 4405822 ATGTGGTCGAAATTAAGACCG 58 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301096 3 1 4 80 3L 4564540 4577927 CGTAGACTTGATACACAAGCA 58 4578776 4578794 GCATGTTGATGCCTTATCG 57 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 3 1 1 110 3L 5227732 5227750 CAACCGTATGAGAGGAGGA 58 5227872 5227890 AGTTTATCCAGTCGCACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0112634 3 1 2 80 3L 5424827 5426128 GGTGGCTATAAGGTTGCCT 59 5426169 5426190 CGGTATCCTTGATATCACATGC 59 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 3 2 3 131 3L 6093741 6093759 CCAGAATGGACCTCGTACC 59 6093853 6094044 GTAGATGTCGCTAAAGGCAC 58 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149 2 1 2 92 3L 6173885 6173957 GCAGGAAAGGTTTCACCAC 59 6173811 6173829 CATCGACATTGCAGGAGTG 59 NA Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 2 2 2 119 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750444 6750462 TTGGCAATCGCATCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 1 2 2 80 3L 7344757 7344777 CGAAGTTGACGGCTATATTGG 59 7344817 7344904 TCTCCGTGTACTCTTTCAGAC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 3 4 15 157 3L 7654600 7655093 GATCTCATCGCAGAAACAGG 58 7654462 7654480 TTTGGTGTGGGTGTATCGT 59 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205 1 1 2 96 3L 7729958 7731214 AACGTAAATCTGTGCTGCAG 59 7729881 7729899 GGATCGTTGAAGACAGCCT 59 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 1 3 3 81 3L 8608092 8608116 CACTACGATGATCATTCTCTTTCTG 59 8608150 8608328 CTCCAGTTGATCTTTGTACTTCTC 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273286 2 1 7 160 3L 8899544 8899563 AAGTAATGCACATCCATCGC 59 8899229 8899363 GGCCAGAGGATGTGTAAGG 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 3 4 4 81 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076312 1 1 2 103 3L 10092786 10092805 CTTATTTGGCCGAACTCCTC 58 10091119 10092720 CAAACTTATCGTTCGCCGA 58 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 3 2 3 118 3L 10681694 10681793 AGAGCTTTGGGACAAGGAC 59 10681874 10682038 TTATTGTTGAAGGCTGCCAC 59 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 3 4 4 115 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865345 10865363 GGCTTGATATCCGGATTGG 58 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 3 3 4 127 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032745 11032763 TCGAACGGATTGTAGTTGC 58 NA Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 1 1 1 88 3L 11114486 11114506 GCTTTATTCCTAGGATTCCGG 58 11114712 11114730 CAGACAGTGAATGCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 rols FBgn0041096 FBtr0076053 3 1 5 149 3L 12054202 12054220 CATGATATCCAGCGATGGC 58 12021969 12054089 GACTGGAGATCACTTTCCG 57 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 2 2 3 80 3L 12406595 12406613 AGGATCGATATCCACGACC 58 12405542 12406552 CTGCTGAAGGAATTTCTCCG 59 NA Drosophila melanogaster 61 ara FBgn0015904 FBtr0075908 1 1 2 87 3L 12582659 12582677 AAATGGGAGCTTGGACCTC 59 12582728 12587276 ACAAGCAATCCTCCGTAGG 59 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075915 3 1 3 88 3L 12735040 12736014 ACCTGCGCAAAGTATTTCAG 59 12736064 12736083 TATCTCCACCGGATAATCGC 59 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0300701 2 1 2 80 3L 13432953 13433045 GAACCTGTACGAGATCGCT 59 13432891 13432911 ATACGCATTGGAGTAGATGGA 58 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776 1 1 3 157 3L 14061820 14061838 ATCGTACGCTTCACGAGAG 59 14062020 14063032 ATGACAGCTTCCTGTTGCT 59 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 1 3 3 80 3L 14739260 14739340 CCCAGATTCCTATTCTGTTACC 58 14739378 14739399 GCATAGATCACAGACTGATTGG 59 NA Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 1 2 2 80 3L 15127565 15128000 CCAACGAAGTGGTTCTCAG 58 15127503 15127521 AAATTGATGATGTCGGCGT 58 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 2 2 4 118 3L 15301835 15301853 TGTACCGATTGTTCCTGCT 59 15301932 15302038 CAAGAAATACGGGTATACCCAC 58 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 1 4 4 88 3L 15964323 15964401 CATTCTAGGTCGAGGCTCC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 3 2 2 80 3L 16382906 16382926 AATGAATCACAGATCGAACCG 58 16382966 16383044 TTGGTAGGACTGTCTATTGGC 59 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 3 2 4 108 3L 16404182 16404201 CTATCTGTACCAGTTCTCGC 57 16400451 16404114 ATCGACATTCTCGTATTTCAGG 58 NA Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 3 2 2 89 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774827 16774845 GTGCTTCTCATACTTGGGC 58 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 1 2 4 86 3L 16785599 16785617 AAGAATGCCGGATTACCCT 58 16784781 16785549 AACAATCACACGTGATCGT 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 3 10 12 135 3L 16914143 16914290 TGCAATAAGGTCATCACCTC 57 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 1 5 7 80 3L 16952972 16954605 CAGGAGCTACCAGATTCGA 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 3 3 3 134 3L 17468579 17468597 CATCGTCACCTACAAGCTG 58 17468751 17468769 AGGTATCCCACGATGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075186 2 1 2 85 3L 17723365 17723383 TGTATCGACCGAAGCTCTG 59 17723429 17731747 CAACTCAACCTGTATCGTAGTG 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 3 12 12 144 3L 19311993 19312012 CCTTCTTCCTGTTCATGCAC 59 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0300340,FBtr0075003 2 2 12 88 3L 19292797 19292816 CTCAAGGAGTTACCGTGGAG 59 19292641 19292746 GTTGAAGGGTGTGCATTCG 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0300340,FBtr0075003 3 2 12 89 3L 19292799 19292817 ACTCAAGGAGTTACCGTGG 59 19292641 19292746 GTTGAAGGGTGTGCATTCG 59 NA Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 3 2 2 80 3L 19604669 19604852 ATAGTGGAGGTATCCAATCCC 58 19604609 19604627 GAAGACGCCTACGTAAGGT 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 2 3 6 82 3L 19685470 19686094 CGAGGTGTACAGATGTACCA 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 2 2 2 143 3L 19811639 19811657 AACAGGTTGACTCCTCCAC 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 1 2 2 92 3L 20181854 20182104 CTGAAGCTGATCATCAATCTGG 59 20182157 20182175 GTTTAAGTTCCACGTGCCG 59 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074850 1 1 3 157 3L 20233089 20233109 CCGAACATGATATCGAACACC 59 20232703 20232972 TGCTTAATCTGCACTTTGTCG 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 1 3 3 61 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265938 21265956 AGTACCGATCGTTTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 3 3 3 81 3L 21414145 21414217 GTTATCTATGATCGCCATCCTG 58 21414085 21414105 TCATTTGAATGACGAGGTCAG 58 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 3 3 3 80 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612186 21612208 GGATGAATCCATCTTTGTACTCG 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 1 3 5 131 3L 21914316 21914334 TGATCCGGATCTCCAACTG 58 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 3 3 3 81 3L 22281967 22281986 AGAACGTACTGCAGAAATGG 58 22282029 22282112 AACGTGTATTTGGGCTTTCC 59 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 3 2 2 84 3L 22672449 22672533 GACAGTCAGGTATTTAAGAAGGAC 59 22672576 22672594 AAAGACTGTAGTCCGCCTG 59 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 3 3 3 84 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718717 TATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 3 5 5 132 3R 66124 66142 TACGAGCAAGAGGACTTGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 1 3 4 106 3R 151087 151105 TCTGACCAGATCAATCCGG 58 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 1 2 2 66 3R 214104 214189 CTTCCTAAATGAGTCCACCC 57 214218 214236 CAGCTCAAGGCTTATGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 2 3 5 123 3R 454060 455857 CCTAATGGACAGACTGGCC 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 3 5 5 84 3R 452847 452870 CGATTGACTGGTATAAAGATAGCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078780 3 1 3 129 3R 1083828 1092478 TCATGGGATCAGGAAGTGAG 58 1092570 1092588 TCGTTGAGGATCTTCAGGC 59 NA Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 3 1 1 96 3R 1560104 1560122 ATCCTGGAACCTCAGTCCT 59 1560248 1560269 GATCAGGTCGGAATTTAATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 1 4 4 83 3R 2212398 2212480 TGACGATGAGAACGCTCTG 59 2212526 2212545 CGATCAAAGGGATTGATGCG 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089278 2 1 4 135 3R 2565373 2565391 GAGTCGGATATCCGGTTGG 59 2537657 2565274 TCTGGAACGAATTCAGCCT 59 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081877 1 1 2 80 3R 4448071 4448089 GCCAATTCAACGGATACGG 59 4448133 4448220 CGTTGGCTCCTTTATGCTG 59 NA Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 1 2 2 256 3R 4478492 4478510 CGTCATGGATCAGGATCAC 57 4478200 4478220 TCTGGTCATCATGGTACTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 3 2 3 91 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542284 4542630 GATACCTGCTGGACTCTTCC 59 NA InUTR Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 3 2 2 60 3R 4576505 4576526 ACAGGAGTGATGTATTTACTGG 57 4576400 4576419 AGTGAATGATCATGAGCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 pum FBgn0003165 FBtr0081993 3 1 5 147 3R 5044472 5051951 CAGGAAATGATTACCACATCCAC 59 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 2 3 3 81 3R 5161908 5161926 GTTCTCGCTTATCATGGCG 59 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 1 2 4 97 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515567 5515585 GTATCAGACCCGGACTCAC 59 NA Nonspecific Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 3 1 1 124 3R 5878496 5878514 AGATGTAGAGCGCCTTCTG 59 5878333 5878351 GATAGAGTTTAAGGCGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 1 2 6 104 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930640 5930658 ATTTGCAATGCTCTCCACG 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 2 2 8 85 3R 5955358 5960548 GCCAGCAAGTAATGGAGAG 58 5955291 5955310 ATATGATGTCTGCATCCGTG 58 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 3 2 8 86 3R 5955360 5960550 AAGCCAGCAAGTAATGGAG 57 5955292 5955310 TATGATGTCTGCATCCGTG 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090033 1 1 4 153 3R 6120030 6122463 CATACAACCAGCTTCACCG 58 6122580 6122598 GATTCGCGGCTTAATGTCC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 2 3 8 106 3R 6359726 6387644 TACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 1 2 6 89 3R 7419479 7429872 AAAGAAGAGGGTGCTGAGG 59 7419408 7419426 CGATTCTTCACGTTCCTGG 58 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 1 3 3 94 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595740 7595758 GTGTGACGAGTAGTCCACC 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 1 4 4 81 3R 7613663 7613756 AGTCTATGACCTATGTGACGG 58 7613799 7613817 TCACTCATGTTCTCAGGCA 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 2 3 15 193 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814461 7814480 GATTGCTGGAAGAAGATGGC 59 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 3 2 2 101 3R 7834942 7835022 TCCATGATGAGATCTCGCG 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 2 2 2 69 3R 8529488 8529506 CATCTTCAATGGGCTGGGA 59 8529601 8529620 TTTGATGAGTTCCTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225 3 1 3 95 3R 8832929 8833258 ACAACGAGGTCTCCATACAC 59 8833316 8833334 CAAACACGCTGGTGATCTC 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 1 5 5 81 3R 8845523 8845623 AAATACACGAGAAGGTCCTC 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 3 4 6 155 3R 9203380 9203627 AAAGATAACGGCCAAGAACG 59 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 1 2 3 143 3R 10116535 10124524 ATTCGCAGTTTCAAGAGATCG 59 10124629 10124647 TGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112631 2 1 3 101 3R 10230784 10230803 AGTTCTTCAGGAGCTTCTCG 59 10225504 10230722 CTTCGATTTCTGCAATCTTGC 58 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 1 3 3 111 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451940 10452025 CAAGGAATACCTTTAGCACACC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 2 5 6 87 3R 11024794 11024813 CACATTCGGCACAATTTGTG 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 1 5 6 85 3R 11024796 11024814 CATTCGGCACAATTTGTGC 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 2 2 2 92 3R 11092081 11092162 GGTGCCCTTAAGTCTTTCCT 59 11092217 11092235 AATGGAAACGATCAGGCCA 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 3 7 13 147 3R 11122418 11125005 GAAATACGATGAGGTTGCCC 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 1 2 2 80 3R 11151701 11151721 GCCCAAAGTATTGTAAATGCC 58 11151564 11151660 TACACGGTGAATCTCCAGAG 59 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 1 3 3 84 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239345 11239363 GGTATTGGCGTTCGAATCG 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 102 3R 11622603 11623027 TCGCTACCAATCACTCGAC 59 11623093 11623111 TCTCCAAATCGGTCAGCTG 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 2 3 3 80 3R 11740153 11740173 GGATAAACTGACCAACGAGTG 59 11737878 11740114 GCAGATATTTCCTCTTTGTGCT 59 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476 3 1 2 117 3R 11995751 11995824 TACCTCTTAACAAGATCGAGGG 59 11995902 11995920 TTGTCTGTCTTCTGACGCA 59 NA Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 1 2 2 91 3R 12256832 12256850 GATGGGAAGGATCTTTGGC 58 12256905 12257013 TGTACAGAGACACAGTGGG 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 1 3 5 133 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391564 12391582 CTGATCTCCCTTGTGTCCC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 1 2 2 138 3R 15137648 15137667 CTCAACTACTACGGATCCGG 59 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0083787 1 1 7 82 3R 15586691 15586709 TACACCTACCTCGCTTCAC 58 15586755 15589342 GACTTTGAGGCAAGTACCG 58 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0083872 2 1 2 148 3R 16122210 16124112 CAGATCTTAGAGCTGCCCA 58 16124223 16124242 GGCGAAGAACATCTTCTGAC 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 2 5 8 144 3R 16146162 16147205 TCAACGATCACGATTTGGAC 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 1 3 3 81 3R 16678288 16678430 TTGTTACAACAGGGAGGCA 59 16678225 16678243 CGATAACCACGATCCACCA 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0300191 3 1 9 88 3R 16792326 16792535 CACTGACATGATTCCTGCC 58 16792587 16792605 TATCGATCTCCGGATTGCG 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089519 2 1 4 73 3R 16894677 16894695 ATCTGGGTGACATCAAGGA 58 16894732 16895043 TGTATCGCCCTTGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 1 2 16 156 3R 16980786 16980965 GCCCACGTCTAATTATGGC 58 16981085 16981103 GATGTCGAAGTCCCATTCG 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 3 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 3 2 2 113 3R 18189835 18189928 CTATCAGCTATCAGATTAAGAGCCT 59 18189999 18190017 CCACCATCAAATTGACGCC 59 NA Nonspecific Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 1 2 3 99 3R 18372499 18372517 TACGACGATGAGTTGGTCG 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273 1 1 3 133 3R 19004882 19008672 GAGGAGCTTCTCAGGTACC 58 19008769 19009170 ATGTCCTGCAGATAGCGAC 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089716 2 1 3 115 3R 19139474 19139492 CATCCTCAGACCTTCTTGC 57 19139271 19139395 GTGGGAACTTCTTTGAGCT 57 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504 3 1 2 81 3R 19821991 19822842 CTACTAGTGCCCTACGATGC 59 19822884 19822904 CTACAATCAAAGCCCAATGGG 59 NA Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 1 2 2 143 3R 19864976 19865327 AGAACGAAGGTCACAAAGAG 57 19865433 19865451 TTGTCTGCATCTTGTCGTG 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 1 2 7 82 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984974 19984998 GAGATCAGCTCCTAATAGTAATTGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 2 4 6 92 3R 20079843 20080373 CCCAAACAAATTGATCAGATCC 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100622 3 1 18 127 3R 20505296 20512926 AAAGACATATTGTGGTATGCGG 59 20513014 20515056 ATCGGGTGGTTTACGATGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100631 2 1 18 114 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20525140 20528752 GTGATATCACTTGCACGCC 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299662 3 1 3 165 3R 20866591 20867475 TTCCTATGTGTTGTCCTGC 57 20866444 20866462 AAGATATAGCGCGACTTGG 57 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 1 3 3 91 3R 21133344 21133422 TACTGCTGAAGGATGGCAG 59 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881 3 1 2 82 3R 21345437 21389808 TGTCCCAAATCTAAGGTTTCAG 58 21400606 21400625 CGTTCATCTCCGATACTGAC 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 2 5 5 104 3R 21507674 21507692 CATGACCAATCTGTACGGC 58 21507760 21507837 AAGATGGCGTAATGGTCAC 57 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 2 4 7 85 3R 21580124 21580142 ATTCGATTCGTTTGCGACG 59 21575102 21580078 CAAGTGGCCTCTATAAACTTGC 59 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 1 2 2 111 3R 21694501 21695269 AGGGATCAGGTTGATCGTG 59 21695344 21695362 GCGATCGAGTTACCAAGTC 58 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084952 2 1 3 110 3R 21819199 21819399 GGATAAAGCATTCTCATCGGA 58 21819471 21819489 TTAATTCGATGTTTGGCGC 57 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 3 4 10 116 3R 22416343 22416361 ACGATAATGACGACAGCGA 59 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125 2 1 3 80 3R 23056335 23056354 CTGATGACCAAGTTGGAGGT 59 23056151 23056297 CTTATCATGACTCCACTTCTTCTC 58 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193 3 1 2 87 3R 23136549 23136567 GATCATAGCCTCCAAGGTG 57 23136423 23136498 AAAGCAATCCTGGTCATCG 58 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 1 4 4 158 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463920 23463939 CACGCTGTAGCATATCAGGA 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 3 6 6 86 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428547 24428565 GTTGGTCATTCTGCTTGGG 59 NA Nonspecific Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 2 4 13 135 3R 24714130 24714148 GCTAACGCAACTCTTGAGC 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 3 4 13 136 3R 24714129 24714147 CGCTAACGCAACTCTTGAG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 2 4 4 165 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301746 2 1 2 86 3R 25662482 25662500 GGACATGGTGCATTATGCG 59 25662550 25662648 TACTGTGCTGGACTCTTGC 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085692 1 1 4 80 3R 26275674 26281383 GATGCCAAGAATCTCCGTC 58 26275612 26275630 GGATGGATGCGTACTTCAG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 1 4 13 196 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 1 5 6 198 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 2 4 4 83 4 596940 597611 TTAACGGAAACGATGACCA 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236 1 1 4 103 4 725814 725832 AACTGCTATAGGCACCGTG 59 725897 731560 GATTTACTCCACTGTGACCCT 59 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0089793,FBtr0301341 3 3 3 80 4 763165 763420 CTGTTGTGGAAGACTCGAC 58 763462 763482 CTCCCTTGTAGAACTTGAACG 58 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 2 3 3 80 4 939206 939224 GTGGACCCAGAAACAAAGG 58 939090 939164 CAGTTCTCGAATGCATACCTC 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300379 3 1 9 85 4 1059053 1060646 CTCTTCAGCAGCTAGACGA 58 1058986 1059005 TGTATCCATCAAAGTCGCCA 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 2 4 7 148 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079843 1079865 GAAGCTCACTGTATGAAGAACTC 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 1 4 7 147 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079844 1079865 AAGCTCACTGTATGAAGAACTC 58 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 1 2 4 92 U 1179257 1179277 GTGTTCAGTAAATCTACGGGA 57 1179331 1183277 ACACCTATTGCAAAGCCTG 58 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200 3 1 3 90 X 31138 33030 AATTCGCAAGGTTTGTGGA 58 33082 33102 GCATTCCACGTAGATAGTCTC 58 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 1 4 8 80 X 165641 166468 TCAGCGATGTTGATTACACC 58 165580 165599 TTGGGTCTACCTGGATTAGC 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0070131 1 1 6 94 X 640329 640561 ATTTGTTTACGACTCACGCT 58 640618 640636 TGGAGGGCATCAGTATGTG 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 1 5 6 86 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640606 640626 CAGTATGTGATAGCTGACCGT 59 NA Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 3 2 2 177 X 1362209 1362292 CATCGTTAAGGCCATCACG 59 1362497 1362515 AATGGTCTGCAGGATAGGC 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 2 2 6 172 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387282 1395834 TGTGCTTAGAATTGCCGTC 58 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 3 3 3 97 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800183 1800204 AACAGCAGATAAAGGTACTTGC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 78 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962427 1962445 ACTTGGACTGGTAGGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528,FBtr0070457 1 2 3 134 X 2341620 2344710 GTTTAAGGCGAGCATGGTG 59 2341504 2341522 AACATGCGATACTGCACCT 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091962 2 2 8 174 X 2380226 2380248 CCCAGATATGTGATTTAAGCAGG 59 2378777 2380092 GTTGGATCGTTGGTGTCTC 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 2 12 12 80 X 3228354 3228595 CGTCGCTTAAGTTCAAACG 57 3228639 3228657 CGGAAATCTGATTTCCCGA 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 1 2 2 74 X 3685389 3685407 ATATACTGGGCGCCATGTC 59 3685518 3685537 TGATGTTACCCGGATTTGAC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 3 2 2 103 X 4570358 4570377 TGAAGCACTACAGTCCTGTG 59 4568640 4570292 GTTGTTGTACGCTCTGCAG 59 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 1 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 2 3 4 92 X 5794983 5795002 GAGACACCAAACCGAAAGAC 59 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 1 2 2 80 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997043 5997061 ATTCCGCCGTAATTCAAGG 58 NA Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 2 2 2 60 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187729 6187747 CTTCTTTCGCTCCTTGGTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944 3 1 2 138 X 6483743 6483762 CGAAGTCACCTACAGGAGAG 59 6483863 6484081 TTAGGTGGATGTAGCCCAC 58 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 1 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 1 3 3 60 X 6772497 6772516 GAGCTCTACAAGGCAAATCG 59 6772600 6772619 TGTAGTTGCGATCGTACTCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 3 2 2 151 X 7127127 7127145 GAACCCTACGATGAGGAGG 59 7127258 7131099 GTATAGTTGCTGGGTTCTGTG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 3 3 7 100 X 8111096 8117667 CCTAAAGCAATGGAATCGC 57 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375 1 2 7 123 X 8117880 8117899 GTCCGTGAACCAAGATAACG 59 8118074 8121915 ATTCCCATTGAGCTGTGGT 59 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 1 2 2 80 X 8318278 8318298 CGAAGAAGTTGAGAAGAACGA 58 8318337 8318418 CTTAAGCGATCACTAGAATTGC 57 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 2 2 3 103 X 8381364 8381382 GAAACGGAGATGTACACGT 57 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 3 2 2 80 X 8977445 8977463 CAGGCCTCATTTACGAGGA 59 8977504 8977583 TGTAAGTTCCTAGGTTCTCCTG 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071294 1 2 6 116 X 9003012 9005127 AATCGCAGATTTAATCCAGCC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 1 3 3 105 X 9048443 9048461 TTTCAAGACCGATCTGCGT 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 3 4 4 118 X 10676327 10676424 AAGTACAAGCAGGTCTTCC 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 2 1 2 163 X 11336697 11336715 CTTTACGGTGAACAGCGTC 59 11337699 11337718 TTTCCACCATTTCCCATCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 3 1 2 164 X 11336697 11336715 CTTTACGGTGAACAGCGTC 59 11337699 11337719 CTTTCCACCATTTCCCATCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 1 2 2 80 X 11450263 11450283 CTCCTACATTGTCCTGAACAC 58 11450131 11450222 GAAGCACCAATGATCAGCTC 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 2 3 5 197 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607537 11607555 ACTCGAACTGTTTGGTGCT 59 NA InUTR Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 3 2 2 81 X 11616425 11616570 GAGAGGAGCGATTTAAGATCG 58 11616613 11616631 GTACGCTCTACAACTGTGC 58 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568 2 1 2 81 X 11763306 11763324 GAAGCCCATACGAAAGGAG 58 11763369 11763496 ATGAGGAGTGAGTCTCCTG 57 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113444 2 1 2 109 X 12499326 12499344 CAACCTGGACAAGCAACAG 59 12499417 12499849 TGATTCTCATTGGGCTCGT 59 NA Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073695 3 1 2 138 X 12796994 12797374 CATGAGCTATTGGCGTGTG 59 12796874 12796895 GTTGTTCGCTGTAATGTTTGTG 59 NA InUTR Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 3 2 3 81 X 13170569 13176207 CAATACACGATCTGCCATCAG 59 13170508 13170528 TTGAAGTCCAATGTCAGAGTG 58 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073825 2 2 4 161 X 13699490 13699508 AATACGACAGTGGTTGGAG 57 13700689 13702412 AAGACACGACCTTCTTGAG 57 NA Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 3 1 1 109 X 14802755 14802773 GAATCCCGACTGGAGAGTG 59 14802269 14802287 AATTCCACGTGAAGTTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074077 2 1 2 80 X 15354853 15354931 GAACATCTACGGAACTCAACG 59 15354793 15354813 AAGGTCTGACCCACTAAATCC 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 1 5 5 80 X 15749869 15749890 CTATAATCGCGTTGGAATGGAG 59 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 3 4 4 80 X 15975869 15975889 CAAATGAACTTTCCGTGTGGA 59 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 3 5 5 110 X 16277019 16277038 CTCACCGATCCCGTATAGTC 59 16276866 16276947 ACAAAGTTGTGCAAGTCCTG 59 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 1 3 3 102 X 16532325 16532446 CTTCTTGAAGAAGACTGGCA 57 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 1 2 2 106 X 16741016 16741035 ACAGCTTCTTAGAAGCAACC 58 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584 2 1 3 109 X 16870572 16908969 CAAATGGAGGAACTGGTGG 58 16870481 16870502 AAGATCGAGAATATGATCAGGC 58 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0074413 1 2 3 81 X 16867135 16867153 CGATGGAGTGGTACTTCGA 58 16867009 16867090 ATGTCGCTGAGGAACAGAC 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 1 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 1 2 2 115 X 17568968 17569359 TTACCTGATGACCAGGGAG 58 17568871 17568889 TACCAGTACCTCCAGTTGC 58 NA Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 2 1 1 69 X 17744853 17744872 CCTCATTGAAACGTACTCCA 57 17744964 17744982 CGGTATCATTAGGCACGGA 59 NA DesignNoJunction Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970 2 1 6 60 X 17784662 17784683 CTGTTCAACATCTATCGCAAGG 59 17784704 17791236 CTCGCTGAGTACGAATCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074554 2 1 9 62 X 18266502 18266520 TCGAGTGTCAGGTGTTACG 59 18266546 18267081 TATCACGGACTGCACATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0074684 1 1 2 155 X 19178847 19191162 TTAGTTTGGTCAACCTGGC 58 19178710 19178729 GTCCCACAAATAGTCCAGAG 57 NA Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 3 2 2 80 X 19177437 19177456 CGTACCACAATCAAGAAGCG 59 19177213 19177396 TTGCTCAGCCATAATTGAACG 59 NA Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 3 2 2 113 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362445 CTATTGGCATACGCATCATCC 59 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 2 2 2 60 X 19565031 19565050 ATCAAGCAGATCTGCATGTC 58 19565155 19565176 CGAAAGGCTTCTCGATAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 2 4 5 80 X 19905587 19920748 TCTACTTTCTGGTAAATGGAGC 58 19905528 19905548 TAGAGCATATCACATCCATGG 57 NA Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 2 2 2 90 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291668 20291686 TCTTCCTTCTCTGCATCGT 58 NA Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 3 2 2 174 X 20540299 20540319 GTCGAAATTCGACAGATTCCG 59 20540455 20540537 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 hydra FBgn0031128 FBtr0300487 1 1 3 89 X 20543395 20546174 TTAAAGACATCGCTCCGAC 57 20543324 20543344 CTCGAATCCTGAATTCTTCCA 57 NA Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 1 2 2 97 X 20919537 20919555 CTCAAGTCGGATGCAACTG 58 20919615 20919700 AGGACAGAACCATCATCCTG 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 3 3 3 60 X 21003747 21003768 TTACGAGGAGTATTCCCATTGG 59 21003841 21003859 GTTGACCACATCGATCACG 59 NA DesignNoJunction Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 1 5 8 82 X 21247629 21247647 TAATACGCGCCTATCTCGT 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073626 1 1 3 176 X 11985544 11985615 CACACCTTATACTTCTAGCGC 58 11985753 11985771 TTTGTGTAAAGCGGTTGCT 58 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807,FBtr0300806 3 2 2 86 XHet 57051 57073 CCTCTTTGTTCTTAATCTTCCCG 59 57119 57600 TCCTCGTCGTTAAGATGCT 58 NA Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 3 1 1 152 XHet 62089 62109 GGGACTATAACATGCAATCCA 57 62546 62564 CTCGTGGACTTTGACTACG 58 NA DesignNoJunction Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 3 2 2 80 XHet 78158 78176 GCTCAAGTACGAGAAGGTG 58 78219 78303 TGAACATAGACCAATGTGGG 57 NA Drosophila melanogaster 61 snoRNA:Me18S-G642 FBgn0086035 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:49Fa FBgn0011881 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30333 FBgn0050333 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30231 FBgn0050231 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30211 FBgn0050211 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30406 FBgn0050406 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U31:54Ed FBgn0063378 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG13814 FBgn0036960 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:84F FBgn0051583 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:12Ea FBgn0011948 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32525 FBgn0052525 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41504 FBgn0085788 FBtr0114241 1 1 1 60 YHet 340272 340291 GGCAAACTTTCTCCACATCC 59 340314 340332 TTCTGGAGGGCTCAATTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 3 1 1 83 XHet 62217 62558 GTTCGCCGTAGTCAAAGTC 59 62605 62623 GTTGTGACGCTGATTTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi18S-1854c FBgn0083040 FBtr0113567 2 1 1 68 X 17039340 17039358 TGATCCCTACAGCGTTGTG 59 17039290 17039314 CCTTAAGAGGAATAGCTAATCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1192c FBgn0082999 FBtr0113564 2 1 1 63 X 17038248 17038269 CCAATCTAATTCTGCATAGTGG 57 17038206 17038224 ATGGTGATTGTTCTGGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188,FBtr0111187 1 2 2 74 X 22361295 22361313 GTATCCGCTTACCAAGCAC 58 22361239 22361257 TTAGTCTTGAATCCGCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 1 3 5 94 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887842 21887860 GATCCCGAGCGATGATCTC 59 NA Drosophila melanogaster 61 unc FBgn0003950 FBtr0077259 2 1 1 84 X 20986759 20987075 CAAATATAACTAGAGTAACGCGGG 59 20986698 20986716 TTTCTGGTAGGCCTTCCTG 59 NA Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624 3 1 2 182 X 20902535 20902606 TATATGTGAAGGAGGAGCCG 58 20902372 20902392 CGTACTCATCTGGATACTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 1 2 2 80 X 20385202 20385384 AAGCTTTACATCTCTGGTGG 57 20385427 20385445 CCAGACTTCCGTCTTTGTG 58 NA Drosophila melanogaster 61 HERC2 FBgn0031107 FBtr0301344 3 1 1 168 X 20282101 20282188 GAGTTCACGAATCAGGAGC 58 20282319 20282338 TGAGCAGAAAGAAGCAAGTG 58 NA Drosophila melanogaster 61 CG42581 FBgn0260871 FBtr0301573 3 1 1 91 X 19990333 19990407 CTTACACGGAGGAGATCCAG 59 19990261 19990285 GTACAGTATTTCACATTCCTTCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG32532 FBgn0052532 FBtr0074778 3 1 1 80 X 19432771 19432793 CATTATCCGGATATTTACTGCCG 59 19428378 19432733 CTGAAACCAGACTTGAATCCG 59 NA Drosophila melanogaster 61 CG7358 FBgn0030974 FBtr0074652 1 1 1 122 X 18786884 18786902 GAGACCATCATCGATTGGG 57 18786707 18786799 CAGAACCTAAACCTGGACTC 57 NA Drosophila melanogaster 61 CG6179 FBgn0030915 FBtr0074558 1 1 1 175 X 18274833 18274851 GATGTGAAGTTCACGCTGC 59 18275050 18275068 TTTCTGATCAGCCGTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 dik FBgn0030891 FBtr0074510 3 1 1 60 X 17980295 17980314 GAAAGCGGAGTATGATAGCC 58 17980337 17980355 GTCGAGCTTTCTTCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970,FBtr0300971,FBtr0300973,FBtr0300974,FBtr0300972,FBtr0300969 1 6 6 91 X 17784171 17784500 GACTCGTTGAATTTCGCCC 59 17784555 17784573 TTGATGATCGGCTGTAGGG 59 NA Nonspecific Drosophila melanogaster 61 xmas-1 FBgn0016080 FBtr0074405 1 1 1 80 X 17046954 17047151 GAGATGCCAGATGGTTTGG 58 17046892 17046913 ATTCGTACCTTATTGCTGTTGG 59 NA Drosophila melanogaster 61 TwdlZ FBgn0052569 FBtr0290248 2 1 1 60 X 16632265 16632285 CAAGGATCGCGTTATTTACCA 58 16632307 16632325 ACTGCTTGGTTATGATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spheroide FBgn0030774 FBtr0074363 3 1 1 122 X 16595434 16595717 GGAAAGCTAATCGATGCCAG 59 16595331 16595354 GTTGTTCAGATTATAGTAGTCCGG 58 NA Drosophila melanogaster 61 CG42512 FBgn0260238 FBtr0300651 3 1 1 60 X 16545562 16545637 AAAGGCGAATATTTCTGGGC 59 16545658 16545678 TAGATATCCTCCAGACGATCC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 1 3 3 60 X 16258648 16259240 GAACTGTTGCGTCAAGAGC 59 16259264 16259282 ACTCCAATTTCTTGCGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pros28.1 FBgn0004066 FBtr0074210 1 1 1 125 X 16170851 16170937 CATAACCAGATTCATTGCCCAG 59 16171023 16171041 TCAGTCTGGAACAGATGCG 59 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299949,FBtr0299951,FBtr0299950 3 3 3 81 X 15989516 15989534 GATTTAAGGCCGAGCAGTC 58 15989389 15989407 CATCTGCCTGAGGATCCTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG8939 FBgn0030720 FBtr0074138 1 1 1 127 X 15893009 15893088 CAGCTGCAGGTACAAATGC 59 15893179 15893197 GAAAGCGTAGCGATTCCAG 59 NA Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0113440 3 1 2 160 X 15730228 15730322 TCTTAATCTATGAGGGCATGAC 57 15730570 15730588 AATTCGGACAATCCAGCTG 58 NA InUTR Drosophila melanogaster 61 Pp1-13C FBgn0003132 FBtr0074017 2 1 1 114 X 15254748 15254838 AGGAACTTAGAGAAGAAGCGAG 59 15254655 15254673 CTTCTCGATATGTGGCGGT 59 NA InUTR Drosophila melanogaster 61 CG9123 FBgn0030629 FBtr0074019 3 1 1 156 X 15235377 15235395 GAGAACGCCCATGTTATGC 59 15235180 15235257 CAAGAATGAAGGTGGGTGG 58 NA Drosophila melanogaster 61 dah FBgn0015926 FBtr0074007 3 1 1 83 X 15224009 15224028 CGGAAATATCGCAGTTTCTG 57 15224074 15224154 CTGAGGCATGTGATAGCTG 58 NA Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073968 1 1 2 117 X 14960327 14960410 TTACAATGCAAGCGATCTGG 59 14960229 14960247 ACGTAGACCGTCATCTCCT 59 NA InUTR Drosophila melanogaster 61 CG11590 FBgn0030545 FBtr0073899 2 1 1 60 X 14094663 14094685 CAAGTCGAGTCTATCTACAAGTG 58 14094703 14094723 TCAACAGATATTCGGAGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15760 FBgn0030508 FBtr0073810 2 1 1 95 X 13566529 13566547 AAGCCGGATCTGTATCCAC 59 13566606 13567140 ATCACTCTGGGACATCAGG 58 NA Drosophila melanogaster 61 BthD FBgn0030501 FBtr0073806 1 1 1 147 X 13506615 13506633 ATTCTAGGTGACCAGCAGG 58 13506744 13506824 AAGTTGAAGTTGGTGCCTC 58 NA Drosophila melanogaster 61 CG15754 FBgn0030492 FBtr0073782 3 1 1 109 X 13422923 13422942 TTGAGGGCTTCTATGTCCAG 59 13423014 13423102 CAGAAACTCAACTGGACGC 59 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 2 3 3 137 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466535 12466554 TTCTTCACCTTGACCTCCTC 59 NA Drosophila melanogaster 61 CG1950 FBgn0030370 FBtr0073638 1 1 1 60 X 11949680 11949698 TCGCAAGGAGAACATTCGT 59 11949638 11949661 CTTTAGTAGCTCAACAATGAAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp318a1 FBgn0030369 FBtr0073623 2 1 1 80 X 11928373 11928453 ATGGTACTGGTGTCCTTTGAG 59 11928495 11928513 GCAATCACCCTTGTTGGTG 59 NA Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 1 2 2 80 X 11126737 11126755 ATCCAACCTTATACGCCCA 58 11120102 11126693 GAACAAAGTCCTCGAAGCT 57 NA Drosophila melanogaster 61 RabX2 FBgn0030200 FBtr0071448 1 1 1 65 X 10311600 10311618 AATGCGTTTCTCGGATGAC 58 10311647 10311665 GCCTTGACATCTATGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585,FBtr0071439,FBtr0112675 2 4 4 83 X 10121983 10122066 AGTGACTCTGCTCATACGC 59 10122113 10122131 ATCCCAGACTTACTGCGAG 58 NA Drosophila melanogaster 61 CG2972 FBgn0030177 FBtr0071430 1 1 1 66 X 9977301 9977319 GATCAAGTTCCTTGTGGCG 59 9977349 9977426 CTCCGCGTATTCATTCAGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3099 FBgn0030145 FBtr0071365 2 1 1 60 X 9514513 9514533 TCTATCGCAAACTAGAGTCCA 58 9514554 9514634 ATGTGCAGTTTAAGCTTGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG15366 FBgn0030080 FBtr0071355 3 1 1 71 X 8967114 8967133 ACAAGCGCCTCGATATACTC 59 8967062 8967080 CAAGGATAATGGTGCCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 1 4 4 80 X 8458337 8458356 TAGTCGAGATCTTTGGCTCC 59 8458398 8458525 CCCACAAACCTAACACAACG 59 NA Drosophila melanogaster 61 l(1)G0095 FBgn0026679 FBtr0071234 3 1 1 150 X 8450548 8450643 CAATCTAATCTGCAGCGCC 59 8450416 8450434 GTGATTCCTTCAAGGGCAC 58 NA Drosophila melanogaster 61 Or7a FBgn0030016 FBtr0071186 1 1 1 80 X 8058363 8058585 ACTTCAGTATAGCCAAGTTCTC 57 8058304 8058322 TTGTCCTGTTGAATCGCTC 58 NA Drosophila melanogaster 61 CG9657 FBgn0029950 FBtr0071057 1 1 1 80 X 7314026 7314047 ATTTGGAACAGCGATATAACCG 59 7314088 7314168 TTGGAAGCCAAAGTAGCGA 59 NA Drosophila melanogaster 61 CG18155 FBgn0029945 FBtr0071051 1 1 1 102 X 7223263 7223364 TACATAAGGATGGCTTCATCGA 59 7223427 7223445 TCCGGATAGAGCATAGCCT 59 NA Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0071005 2 2 3 142 X 6894194 6894212 GTGATCTCGGACTTGTCCC 59 6896823 6896844 CGTCTTATCATCGTCTTAACCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3815 FBgn0029861 FBtr0070899 3 1 1 92 X 6189578 6189753 ATCATGGAGCAAATCAAGCA 58 6189808 6189826 GTAGTACGGATGCTTCGTG 58 NA Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869,FBtr0070870 3 2 2 87 X 5954539 5954617 GTGAGGGACTTACCAGAGG 58 5954668 5954686 CCTTGAAGGAACTCTCCGA 58 NA Drosophila melanogaster 61 CG15764 FBgn0029817 FBtr0070820 1 1 1 60 X 5764001 5764019 ATGCTACCTATCTCGTCCA 57 5764043 5764061 TTAAAGAACCCATCGCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11462 FBgn0029815 FBtr0070831 3 1 1 139 X 5734707 5734725 TAATTTGCCCGTTGCTCTC 58 5734586 5734604 GAAAGGCGAACCCAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NAAT1 FBgn0029762 FBtr0070797 3 1 1 80 X 5301718 5301790 CTTTCTGATCGGCAAACCC 59 5301656 5301675 GACCAAATCTTCACCGTTCC 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301950,FBtr0301953,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 1 7 7 94 X 5272543 5272669 GTCTACACAAAGGCATCGT 57 5272723 5272745 GCATGGTAAGCTACTATAAGTCC 58 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0070729 3 1 5 114 X 4824086 4830054 GTATTTAAGCACAAATGCAGCC 59 4823993 4824012 TGCTAGTGTTATTTGTGCGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299601 3 1 2 69 X 4676732 4676804 ATCAAACCGAAGCTATGGC 58 4676681 4676699 CGCATTCGACTACAGTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42499 FBgn0260225 FBtr0300629 1 1 1 216 X 3688073 3688093 CAGAATGTCATTCCTGGTCAG 58 3688271 3688289 CGTGAATCTGATTGTGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng4 FBgn0010296 FBtr0070538 3 1 1 60 X 3138132 3138150 CTTTACGGAGCCTGATGTC 58 3138090 3138108 ATCGATGTAGTCCTCGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng1 FBgn0002933 FBtr0070523 2 1 1 273 X 3136533 3136551 GATGATCCACGAGTCGGAG 59 3136788 3136806 TCATTCATCGGATCTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 2 1 1 79 X 2842166 2842253 GTAGCCCTGGTAACAGGTG 59 2842296 2842314 ATCACTTTGGCACCATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14421 FBgn0029644 FBtr0070554 2 1 1 79 X 2835653 2835672 AACTTCCAGATCTTCGGTCG 59 2835714 2835732 AACAGATCGGTCAGCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0113325 2 1 2 186 X 2784837 2784855 CTATCCACCTGTCCACCTG 59 2787341 2787360 TAGCGATAGAAGGTCATCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302448 2 1 4 112 X 2476756 2476775 ATAGTGAAAGTGCAGTGGGA 59 2476848 2477050 CCGAATTGTATGTGGGTACTC 58 NA InUTR Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 3 3 3 95 X 1376771 1376789 GTCAACATCCTCAACCTGG 58 1376502 1376712 GATGACGAAGATGTCCGAG 57 NA Drosophila melanogaster 61 CG32808 FBgn0052808 FBtr0070295 1 1 1 154 X 1363271 1363289 TTGAGCAAGTTTGTCCAGC 59 1363073 1363091 GTATCGCTGAACACTTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 3 1 1 83 X 1065650 1065668 TCTAAGGTGGATCCTAGCC 57 1065715 1065850 CTCGATGCTAACGTTCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3690 FBgn0040350 FBtr0070185 2 1 1 97 X 844061 844079 CAACAATCTGATTGTGGCC 57 843917 844002 GTCCACTGGTCATTATAAGCT 57 NA Drosophila melanogaster 61 mus81 FBgn0040347 FBtr0070170 2 1 1 60 X 835393 835411 GAGACTGTTCCATTCTGCG 58 835434 835453 AGTTCCTCGTCGATTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 2 2 2 84 X 712815 712892 GCGATCCTAACTGTGTTCTG 58 712750 712768 GTGTGCATAGAGGAAAGCG 59 NA Drosophila melanogaster 61 CG13362 FBgn0029531 FBtr0070150 2 1 1 157 X 644738 644814 GACAACAACGGAAACCAGG 59 644599 644617 ATGGATCGTACTGAGCACC 59 NA DesignRelaxed Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0273184 3 1 2 118 X 541601 541621 ACTGATGGTAACACTTCATCC 57 541766 541784 AAGTCCATGATGTGGTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929,FBtr0070110 2 2 2 80 X 488332 490399 GCTATACGGTACCCAGCAG 59 490441 490461 GAACCAATGTAGGTGTACGAC 58 NA Drosophila melanogaster 61 CG3176 FBgn0029524 FBtr0070078 1 1 1 86 X 376389 376407 GATGGATCTCTGCGAGGAG 59 376454 376559 CGATTACCAAATAAAGTCACGC 58 NA Nonspecific Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 1 3 3 97 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242174 242192 TACTGATGTGGCATCTGGT 58 NA Drosophila melanogaster 61 Su(Ste):CR41533 FBgn0085673 FBtr0302348 1 1 1 61 U 7761380 7761399 TTCTGTGAACGAGTGAACTG 58 7761338 7761356 CCATCTGGACCAACCTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40583 FBgn0085498 FBtr0302524 2 1 1 60 U 4408732 4408752 GTTTACAGCGTTGACTACCAG 59 4408692 4408713 AAAGTGTATGTTCGTGTAGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kif3C FBgn0039925 FBtr0089196 3 1 1 91 4 1186042 1186062 ATTTCATCTTTGGTGGATGGC 59 1186111 1186195 GTATTCCCTCCTAAGGAATCCTG 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224,FBtr0100296 1 5 5 80 4 1036098 1036119 CTTAGTACCAAAGCAAAGTTCC 57 1035967 1036058 AGAGTTTCATACTTGTGCGA 57 NA Drosophila melanogaster 61 CG11360 FBgn0039920 FBtr0089091 2 1 1 76 4 701737 701755 GTAGCAGAAATAGTGGGCA 57 705237 705258 GGTGTCTTAATGTAAGTGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 2 4 4 81 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383642 TGTAGAACTGTGCAACGAG 57 NA Drosophila melanogaster 61 ci FBgn0004859 FBtr0089178 1 1 1 80 4 71987 72010 CACATATCCAGATAACAACATCCC 59 71874 71950 AGTTCTTCAACGAGAATGCTG 59 NA Drosophila melanogaster 61 RNaseP:RNA FBgn0046696 FBtr0085775 3 1 1 60 3R 27043253 27043271 ATTTCCCAGCAGGAAACCT 59 27043211 27043229 CCTGGTAGCAGGATTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2053 FBgn0039887 FBtr0085873 3 1 1 102 3R 27864978 27864996 TTGCCAGGAAGGTTTAGTG 57 27865061 27865130 ATCATCACAAACCTTGTCCT 57 NA Drosophila melanogaster 61 CG42233 FBgn0250755 FBtr0290135 2 1 1 80 3R 27630082 27630252 GCATGACCTAGAAACAGGG 57 27630020 27630042 CTGATCCTGTCTACACTTAAACC 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 2 4 4 108 3R 27230212 27230232 CCTCAAATGCCTAAGTTTGTC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750,FBtr0085749 1 2 2 60 3R 26789596 26789616 GGAAGGGATCAGTATAATCGG 57 26789556 26789576 GCTGGTTGTAATTGTAGTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31371 FBgn0051371 FBtr0302522 1 1 1 88 3R 26328529 26328609 ATTTAAGCTGGGCTCCTCC 59 26328459 26328477 ATTCTAGCCAGAACCTGGC 59 NA Drosophila melanogaster 61 CG11498 FBgn0039749 FBtr0302562 2 1 1 91 3R 25981534 25981645 CTTTACCAGATTGACCACCCT 59 25981463 25981481 GATTAGCGAACAGACGCAC 59 NA Drosophila melanogaster 61 CG7946 FBgn0039743 FBtr0085561 1 1 1 80 3R 25879119 25879140 AATCAGTGAAGAAATCCAAGCC 59 25879179 25879278 CGTTCCGGATGTTATTGACTG 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085597 1 1 3 91 3R 25865120 25865208 AAATTTGCCGGACTACGAC 58 25865047 25865065 TTGAAGATGCCCTCTGGAC 59 NA InUTR Drosophila melanogaster 61 CG7911 FBgn0039735 FBtr0085606 3 1 1 103 3R 25829781 25829801 CGTAGCTTAAGACCAAATGTC 57 25829613 25829716 AAGTTCATCTCGACCTTGC 57 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 3 2 2 81 3R 25777672 25777690 GGGAGAATCTGACATCCCG 59 25777545 25777630 ATCGATTTCTGGGTATCATTGC 59 NA Drosophila melanogaster 61 CG7598 FBgn0039689 FBtr0085473 3 1 1 83 3R 25563168 25563186 AACTCGGATCACACCAAGG 59 25563230 25563309 CTTAAAGGATTTCCGCACTCTC 59 NA Drosophila melanogaster 61 Pcd FBgn0024841 FBtr0085458 3 1 1 106 3R 25548982 25549000 TGATTAAGCCGAACTGCCA 59 25549070 25549169 TTGCGACAGGCTTCTACTC 59 NA Drosophila melanogaster 61 ppk21 FBgn0039675 FBtr0085448 2 1 1 89 3R 25492257 25492333 ACTACTAGCTAGCTTTGGTGG 59 25492383 25492402 CCGATGGAGAAGTAGTAGGC 59 NA Drosophila melanogaster 61 CG7567 FBgn0039670 FBtr0085472 1 1 1 116 3R 25413411 25413429 CATTGTGGACTTCGTGCTC 59 25413215 25413233 TGGATCTTGATCTGGACGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085433 3 1 2 81 3R 25318464 25319181 CGATATCGATAAACATACTCCTGC 59 25318406 25318424 TAGAGTAGGGACAGGGCTC 59 NA InUTR Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0110908,FBtr0085437 2 4 4 98 3R 25141738 25141756 GCTAGTCCCAAGAAGAACC 57 25141593 25141678 GTTAGATTCCTCAGTCTGTGC 58 NA Drosophila melanogaster 61 ligatin FBgn0041588 FBtr0085410 1 1 1 170 3R 24977153 24977171 CTGTACACCCTGTGGATCG 59 24976943 24977020 GTTTACGGCCATCAACTGTC 59 NA Drosophila melanogaster 61 CG34295 FBgn0085324 FBtr0112491 3 1 1 60 3R 24615669 24615689 TCAAACGACTCTTTCAAACCG 59 24615711 24615729 CCACAGCGATAGTTCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9988 FBgn0039591 FBtr0085305 3 1 1 81 3R 24462950 24463026 ACAATAAGATAGGCGACAACAC 58 24463067 24463086 ACCTTCTTAATGGCCGACTC 59 NA Drosophila melanogaster 61 CG33213 FBgn0053213 FBtr0085271 2 1 1 60 3R 23744137 23744156 AAAGTGGTCGTCCTATTTCG 58 23744096 23744114 GTCTGGGATCACCTCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5017 FBgn0039553 FBtr0085246 2 1 1 81 3R 23739080 23739100 GTTCTTTGAGTTCTTCTCGCC 59 23739143 23739215 TTGCAGCATAGCATTGACG 59 NA Drosophila melanogaster 61 gb FBgn0039487 FBtr0085132 1 1 1 93 3R 22936359 22937002 TGATATTCGTACCAACGACCA 59 22936286 22936304 TTGGGAATCTCACAGGCTC 59 NA Drosophila melanogaster 61 CG14257 FBgn0039479 FBtr0299564 3 1 1 103 3R 22905114 22905609 CATCACGAGACGATCACCA 59 22905676 22905694 GGAAGGTACTGATGGGTGG 59 NA Drosophila melanogaster 61 CG6295 FBgn0039471 FBtr0085077 1 1 1 66 3R 22832731 22832749 ATGAAACTGTTCCTGGCCT 59 22832617 22832635 CATTCACACGAACCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5500 FBgn0039461 FBtr0085064 3 1 1 163 3R 22705550 22705818 AACATAGAGATACCTCCCGAG 58 22705943 22705961 AACATCTTCAGGTTCGGGT 59 NA Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095,FBtr0085096 1 2 2 60 3R 22692019 22692038 AGAACTACGATGCTGTGGTC 59 22691922 22691940 ATCTCCACGAACAGAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995 2 1 6 260 3R 22083752 22085532 CAAGTGTAGAACTACACTCGA 57 22083512 22083530 CACTCCAGAGATGTTCTCG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 m2 FBgn0002592 FBtr0084981 1 1 1 60 3R 21842840 21842861 AGTTGCTCATTGAAGATGACAC 59 21842801 21842821 AGACCGTACTTGTGGATAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 3 2 2 134 3R 21425811 21425829 GCCCTCATATCACAGAACC 57 21425927 21426004 GTAGGGTGCATATCTGACG 57 NA Drosophila melanogaster 61 CG31437 FBgn0051437 FBtr0084834 3 1 1 104 3R 21209455 21209547 AATATTGGTGATCTTGGGCCT 59 21209610 21209631 TCCTCGACATCTATATCCAAGC 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113351 2 1 5 73 3R 21151117 21151140 CACATAAGCTACTGAAGTCATACC 59 21149519 21149539 TTTGCCAGACTCATCATACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10425 FBgn0039304 FBtr0084867 2 1 1 145 3R 21087198 21087280 TTAAGGATGCCCTGAAGGG 59 21087071 21087089 AACTATTCGCAGTGGTCCC 59 NA Drosophila melanogaster 61 CG31106 FBgn0051106 FBtr0301022 2 1 1 80 3R 21042173 21042262 GCTTCAGATTATTGGATTCGGG 59 21042300 21042321 TCGTTTATGACCATCATCAGGA 59 NA Drosophila melanogaster 61 CG11771 FBgn0039252 FBtr0084748 1 1 1 95 3R 20757948 20758023 TACATAGTGCTGGTACCGG 58 20758081 20758100 GATGGTGATGTCACTGAAGG 58 NA Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084686 3 1 2 103 3R 20538731 20538752 CAGAGCTTTCTACAGTCTACCA 59 20538816 20540786 GAACAGCAGAAATGGCCTC 59 NA InUTR Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 3 2 2 81 3R 20378683 20378702 AAGAAAGACGAGAACCTGGG 59 20380118 20380196 AGGTGAGCCAACTATCCAC 59 NA Drosophila melanogaster 61 CG5762 FBgn0039190 FBtr0084627 3 1 1 81 3R 20186909 20186927 AACGAAATCGTAGACGGGA 58 20186788 20186864 CTCGGTCTTTCTTCCTGGG 59 NA Drosophila melanogaster 61 CG5669 FBgn0039169 FBtr0084565 2 1 1 60 3R 20050915 20050934 CCCAATCTTCAGGCTTTACC 58 20050874 20050893 GAATGATTTGCACTTGACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5510 FBgn0039160 FBtr0084576 1 1 1 109 3R 19994270 19994288 TACCACTTCGGCATGTCTG 59 19993850 19994202 CGGATAATCTCATCGTGATTTACG 59 NA Drosophila melanogaster 61 CG31133 FBgn0051133 FBtr0084583 1 1 1 60 3R 19973729 19973747 GGTCGGAGCTACAACAGAG 59 19973687 19973708 CCGTATAAAGACTAGGAATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6129 FBgn0039152 FBtr0084544 3 1 1 83 3R 19948738 19948814 AGTTGAATTTGAGGTCTGAGG 58 19948859 19948877 TCACTCGGTTAAGCTCCTC 58 NA Drosophila melanogaster 61 CG13607 FBgn0039151 FBtr0084585 3 1 1 60 3R 19940884 19940904 CAATTGCAGCAGATCTACGAG 59 19940844 19940862 CGGCCATGAGTATGTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 2 2 2 143 3R 19864977 19865328 GAACGAAGGTCACAAAGAGC 59 19865433 19865452 TTTGTCTGCATCTTGTCGTG 59 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 1 1 1 253 3R 19586064 19586174 GCCGCAAATCTTGTTAAGTC 58 19585758 19585776 GATGGAGCTATGAAGGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 beat-IV FBgn0039089 FBtr0084433 3 1 1 81 3R 19399757 19399775 AGTTCTACCGATACGTGCC 59 19399819 19400035 GAAAGCTCCTCAATGACTCG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 CG13838 FBgn0039041 FBtr0084344 3 1 1 86 3R 18868097 18868115 ATATCGATGGAGAGTCGCC 58 18868164 18868183 ATTGACTCTGGCCATCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or94a FBgn0039033 FBtr0084341 3 1 1 88 3R 18813738 18813817 ATTAGAAGCCTAACCCTGACC 59 18813866 18813885 CTAAAGCAGATGATCAGGGC 58 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 2 4 4 80 3R 18614228 18614310 ATAGTTTCTATGCGGATCCCAG 59 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 CG17141 FBgn0039020 FBtr0084322 3 1 1 96 3R 18573111 18573131 AATGTAGACTGCATAGTCGAG 57 18572980 18573053 GTTTAACACCACTTCCGGT 58 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 1 3 3 80 3R 18537937 18538032 AAAGGAGACTATCACGGTCG 59 18537876 18537895 TCAATGCGTCCGATATAGGG 59 NA Drosophila melanogaster 61 CG5376 FBgn0038977 FBtr0084292 2 1 1 118 3R 18314346 18314415 GACTTTGAGGAAGCCAAGG 58 18314246 18314264 TCTTGTCGTGATTTGGGAG 57 NA Drosophila melanogaster 61 CG34288 FBgn0085317 FBtr0300623 3 1 1 126 3R 18272941 18272965 CCGAGAATCAGTAAAGAGTATACCA 60 18272774 18272793 CAGAAATCGGGAATTCTGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34288 FBgn0085317 FBtr0300623 2 1 1 126 3R 18272942 18272965 CCGAGAATCAGTAAAGAGTATACC 58 18272774 18272793 CAGAAATCGGGAATTCTGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7077 FBgn0038946 FBtr0084205 2 1 1 81 3R 18178181 18178260 GAACTCATTGAGGCACTCAG 58 18178302 18178322 GCTCTTCATCATTGAGGTCAC 59 NA Drosophila melanogaster 61 Gld2 FBgn0038934 FBtr0084200 3 1 1 83 3R 18040634 18040905 AAGTCCAACATTACAATGCCAG 59 18040949 18040967 GAATTCGCGCCAATAACGA 59 NA Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 1 2 2 80 3R 18113613 18113631 CGCGTAGAGGTCTTATCGT 59 18113675 18115212 GATCATGAGATCTGGCGTG 58 NA Drosophila melanogaster 61 Gr93c FBgn0045469 FBtr0084159 3 1 1 82 3R 17669890 17669966 CGTGGCATATGAAGTGGGA 59 17669826 17669846 TACTTCGAATAGTCCCAAGGG 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162,FBtr0301327 1 6 6 80 3R 17612577 17612663 AACATAGCAGATTACGACGG 57 17612516 17612536 GAAGAAGTGACCGTATAGCTG 58 NA Drosophila melanogaster 61 bap FBgn0004862 FBtr0084087 1 1 1 253 3R 17215146 17215164 CTTTGGACATGAGACGCTG 58 17215502 17215520 GATCTTCACCTGGGTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10824 FBgn0038865 FBtr0084028 2 1 1 60 3R 16986379 16986397 GCATCCGCTTCATTTACTG 57 16986337 16986357 AGAAGAATCACCAGCTTATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5793 FBgn0038858 FBtr0084013 2 1 1 80 3R 16953765 16953852 TCTCAATTACATGGACGTTGTG 59 16953893 16953911 GAAGATGTGGGCTTGAGGA 59 NA Drosophila melanogaster 61 CG15695 FBgn0038832 FBtr0083967 2 1 1 81 3R 16668747 16668816 TAAGTACAAGCTGGGTCCT 57 16668861 16668879 GCAATAGGTGATCATGGCA 58 NA Drosophila melanogaster 61 CG31223 FBgn0051223 FBtr0083965 1 1 1 89 3R 16656927 16657004 AAAGTGTCACTTCTGTCGC 58 16657057 16657075 TTGGACTTGTAGCATCCCA 58 NA InUTR Drosophila melanogaster 61 CG31210 FBgn0051210 FBtr0083844 1 1 1 94 3R 15842984 15843002 TAGATCACAGATGCCGCAG 59 15841011 15842926 GTTCAACGCCTTGATTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG17190 FBgn0038761 FBtr0083845 3 1 1 60 3R 15837890 15837908 GATAAACACAGTTGGCGGT 58 15837848 15837868 CCGATGAGTATTGCTCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083698 2 1 2 230 3R 14732633 14732651 TTCACCAAGCCAATTCGAG 58 14733024 14733042 CGTCATATACTGGTTGGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18208 FBgn0038653 FBtr0083677 2 1 1 105 3R 14635159 14635180 CATGGTCTTTGTGTACATACGA 58 14633001 14635093 GAAGCTCGTTACCTGTTCG 58 NA Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634 2 1 2 83 3R 14424565 14424647 CAACTTAAGGTTGCAAACTCTC 58 14424689 14424709 GCGCTAGAATTGTATTTGGAC 57 NA InUTR Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 moi FBgn0261019 FBtr0299938 3 1 1 80 3R 14081524 14081603 TGTTTGCCAAAGAAGTACTCC 58 14081645 14081663 TTCGACGACTTTGTCATGG 58 NA Nonspecific Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083567,FBtr0083565,FBtr0083566,FBtr0083568 2 4 4 82 3R 14073561 14073580 TATTGCCATGAACGATCTGC 58 14073621 14073711 GAATCTCATAGTAGAACACCGAG 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 2 4 7 114 3R 13997412 14001059 TCCGCTAAACGAGAAGACC 59 14001137 14001155 CTTGAACTTGAGGTCGCTG 58 NA Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 3 2 2 91 3R 13991871 13992084 TGGTGAAAGTAGGAGACTCC 58 13991799 13991817 CTTGCCATTGACGAGATCG 59 NA Nonspecific Drosophila melanogaster 61 CG31246 FBgn0051246 FBtr0083514 3 1 1 199 3R 13637425 13637444 ACTAATGCTCAGGTAGAGGA 57 13639332 13661883 TGTATTCGATGCTGTCACG 58 NA InUTR Drosophila melanogaster 61 CG31246 FBgn0051246 FBtr0083514 1 1 1 125 3R 13637498 13637518 TTATGACTGCTTAAACGGGAG 58 13639331 13661882 GTATTCGATGCTGTCACGG 58 NA InUTR Drosophila melanogaster 61 CG34281 FBgn0085310 FBtr0112477 1 1 1 60 3R 13438896 13438914 ATACGGAGGATTTGGTGGA 58 13438936 13438956 GCTAAACTGGTTGTATTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31418 FBgn0051418 FBtr0083432 1 1 1 60 3R 13110085 13110105 AGGAGTATTGGAAAGGGACAC 59 13110127 13110145 AGCGATTCCTTCTTCCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31268 FBgn0051268 FBtr0083390 2 1 1 93 3R 12857937 12857955 GATTTCCGGGACCAATTGG 58 12858011 12858095 TCATTGCTGCCTTGTTTCTG 59 NA Drosophila melanogaster 61 CG14893 FBgn0038451 FBtr0300865 3 1 1 93 3R 12446581 12446599 GAAATGGACAACGGCATCC 59 12446652 12446733 GCTTCTCAATAATCACCTTTCCC 59 NA Drosophila melanogaster 61 CG10345 FBgn0027562 FBtr0083360 2 1 1 83 3R 12423776 12423794 CCAACTCTTCGTGCTACTG 58 12423647 12423732 AAGGAATGTTGTAGTAACAGGG 58 NA Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 2 1 1 113 3R 12308909 12308985 TGAAACGTCTCTTCAATGAGC 59 12308816 12308834 CAATCTCTTCCGGTAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14894 FBgn0038428 FBtr0083314 2 1 1 62 3R 12268146 12268164 CTATAGAACTGTGGCCGGA 58 12268048 12268066 CTTGCTCATAGAGCTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Zip3 FBgn0038412 FBtr0083266 1 1 1 89 3R 12133112 12134062 AGCAGTTGACTTCCATTGG 58 12134115 12134133 CAGTCTCTTGGTGGTTGTG 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216,FBtr0083215,FBtr0100595 1 3 3 80 3R 11827977 11827996 GTTCATTGGTGACCAATTGC 58 11828036 11828140 GTGGTTTCATATCGTCATTGAC 57 NA Drosophila melanogaster 61 CG14877 FBgn0038380 FBtr0083249 2 1 1 80 3R 11715362 11715481 CGATTATTCCTTGGCTGCAG 59 11715301 11715322 GAACCTCCAACTGATATGAGTG 58 NA Drosophila melanogaster 61 Pbp45 FBgn0038371 FBtr0083190 1 1 1 60 3R 11665106 11665127 TGAATATCTTTGACGACTGCTG 58 11665067 11665086 CCATCATTAACCAATCGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14870 FBgn0038342 FBtr0083145 1 1 1 83 3R 11308096 11308114 AGAGCACCAGTCCATATGG 58 11308279 11308297 AACCGAGTAGTGTCTCCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 2 3 3 89 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239350 11239368 TTGTTGGTATTGGCGTTCG 59 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 3 2 2 80 3R 11229202 11229223 CTCAGCATGGTGTTTATATTGC 58 11229087 11229163 ATAGTACGTGGATTCATGCTG 58 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 2 2 2 145 3R 11143153 11143227 TCGAGTGGATTACCTGGAG 58 11143335 11143354 GGCTGTTGATGTAGTAGCAG 58 NA Drosophila melanogaster 61 CG3817 FBgn0038275 FBtr0083003 1 1 1 60 3R 10724691 10724709 GTGCGATTCCAGAAAGACG 59 10724731 10724751 CTTTCTCGATCTCGAAATCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14860 FBgn0038273 FBtr0289976 2 1 1 166 3R 10720664 10720685 GTGGTTGGATAATATTGCGGAC 59 10720872 10720890 TTGGCTTACTGACCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0301081 3 1 2 139 3R 10246501 10246520 TCCAGGAATGTTTCTCTGGA 58 10246622 10246706 CCTTGCTCATGTCTTCTCC 57 NA Drosophila melanogaster 61 CG31495 FBgn0051495 FBtr0082882 1 1 1 60 3R 9664984 9665003 AATACGGGAAGTCTTGGAGG 59 9664943 9664961 GTCGTCAATGATGACGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ry FBgn0003308 FBtr0082704 2 1 1 98 3R 8858519 8859347 ATGGAAAGAAGGTGACCGA 58 8859409 8859427 CACATCCCAACTTCGTTCC 58 NA Drosophila melanogaster 61 Arp87C FBgn0011745 FBtr0082652 3 1 1 85 3R 8519470 8519558 ATCTCAAGATCAGGATCGCTG 59 8519605 8519623 GAAAGTATCGAGCGAGGCT 59 NA Drosophila melanogaster 61 Cyp313a4 FBgn0038076 FBtr0082667 2 1 1 80 3R 8506922 8506940 CTAAAGATACCGGGACCAC 57 8506795 8506878 TGCGTTGAGGATATCTTCC 57 NA Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 3 1 1 83 3R 8467005 8467281 TCTATGCCTCATCGGATGTG 59 8466941 8466959 ACACATCGTATCCTGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 3 2 2 96 3R 8236067 8236188 ATTGTCGCAAGTGTGATCG 58 8236248 8236266 TATGTGAAGTACGCGTGGT 59 NA Drosophila melanogaster 61 CG4860 FBgn0037999 FBtr0082623 1 1 1 116 3R 8046699 8046847 GAGGAGTATGGTGGTTCCG 59 8046601 8046621 ACCCAGGTACAGGTTATTCAC 59 NA Drosophila melanogaster 61 CG4810 FBgn0037994 FBtr0082546 3 1 1 105 3R 8019754 8019774 GTAGAACCTCCGATGGATGAG 59 8019592 8019687 CAATGCGAAGAACCTGCTG 59 NA Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300581 1 1 2 80 3R 7451340 7451430 CGGAATCACTACTGCTACG 57 7451278 7451297 ATGAATATTGCTGGACAGGT 57 NA Drosophila melanogaster 61 Ranbp9 FBgn0037894 FBtr0082386 3 1 1 81 3R 7241196 7241274 GAAACTATGAGCGAAAGGTCAC 59 7241316 7241334 GTCAAACGGTTGTCCTGAG 58 NA Drosophila melanogaster 61 CG4596 FBgn0037849 FBtr0082289 1 1 1 61 3R 6699041 6699059 ATCACATCGTCAGTGTGCA 59 6699272 6699290 TTCAAGTCCCGGATTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42633 FBgn0261356 FBtr0302274 1 1 1 80 3R 6607459 6607479 ATTCTACTCAAGGACGTAGGT 58 6607345 6607422 GGTAAGAACATACTTCTCATAGCC 58 NA Drosophila melanogaster 61 Rrp46 FBgn0037815 FBtr0082248 1 1 1 127 3R 6239494 6239570 GTGGCAGTATTGATGCCTG 59 6239661 6239679 ATCTAGCACATACTCGCCC 59 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 3 3 3 85 3R 5590340 5590415 TAACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 CG8412 FBgn0037743 FBtr0082130 3 1 1 80 3R 5582665 5582684 AGGAGAGCTTCAATCTCCAG 58 5582724 5582805 GATAGTCATGGTGATCGTACTG 58 NA Drosophila melanogaster 61 Rpt3R FBgn0037742 FBtr0301536 2 1 1 116 3R 5581284 5581350 AGCAAATTGGCATCGATCC 59 5581186 5581206 CGACACGAATAAATGATGCAG 58 NA Drosophila melanogaster 61 CG9444 FBgn0037730 FBtr0082099 2 1 1 87 3R 5507628 5507707 GCAGGAACGAATAAAGAATTCC 58 5507562 5507580 TAATTCGCCCATCATGAGC 58 NA Drosophila melanogaster 61 Task7 FBgn0037690 FBtr0082045 3 1 1 81 3R 5237205 5237278 TATGGGCTATGCTATGGTGG 59 5237143 5237164 GGATGCAAACTTATTCAGACGT 59 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 1 2 2 80 3R 5159494 5159513 GACCTTAAGCCACAGAACCT 59 5159373 5159452 CTGAGCAAACCCAAAGTCTG 59 NA Drosophila melanogaster 61 bel FBgn0000171 FBtr0081888 2 1 1 174 3R 4483877 4483895 CTAGGGACCCTCAACAGTC 58 4483550 4483739 GAATCGAATTCACCACCGT 58 NA Drosophila melanogaster 61 Or85c FBgn0037591 FBtr0081899 3 1 1 88 3R 4337630 4337648 TATAGCTCGACCTCAGAGG 57 4337500 4337579 ATACTTGAAGAAGGTCCGTC 57 NA Drosophila melanogaster 61 CG31462 FBgn0051462 FBtr0081851 3 1 1 60 3R 4212044 4212067 GCGACATCCTATAATGAGAATCTG 59 4212007 4212025 GATGCTGATTGAGGGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539 2 1 2 101 3R 3356700 3356924 AAATCGATTGTCGCGTGTG 59 3356986 3357007 CACGTGGATAGAGATACATTCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539 1 1 2 155 3R 3356700 3356924 AAATCGATTGTCGCGTGTG 59 3357043 3357061 CTCCAGGCAATAGAGCTCC 59 NA InUTR Drosophila melanogaster 61 Mst84Da FBgn0004172 FBtr0081584 3 1 1 106 3R 3191577 3191598 TCCACCTTCAATAGTTAACACC 58 3191665 3191683 ACGTAATTCGGGTTGACGT 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 rn FBgn0259172 FBtr0299638,FBtr0299639 3 2 4 125 3R 3127574 3127592 GAATGGTCACGTGAAGACG 59 3126885 3127485 TTGTTGTGCGGCTTATTCG 59 NA Nonspecific Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571,FBtr0081570 1 2 2 149 3R 3001106 3003937 CAAGAGCTATAAGCACGGC 58 3004050 3004068 TCCAGACAGTTGGGATTGG 59 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 3 1 1 91 3R 2045633 2045942 AGATGATGTACCAGTTCCCG 59 2045561 2045580 CATTTCCGGCGATATTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 1 2 2 96 3R 1046105 1046123 AGAGACCAACGAAGAGCTG 59 1046181 1046266 GGTTACGTTCTTAAGGTGGTG 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078952,FBtr0111207,FBtr0078953 2 4 4 89 3R 161660 161741 GTTTGACTCGCATGTTGCA 59 161589 161610 ACTGTTGGTGTTAGACTATTGC 58 NA Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 2 2 2 80 3R 52168 52259 GGATTATGGAATGGACTGATGG 58 52299 52318 CATTGTCCCACAACACTGTG 59 NA Drosophila melanogaster 61 CR33701 FBgn0053701 FBtr0091689 1 1 1 60 3L 9506839 9506860 CTAGTTTCGAACTCAACTTGTC 57 9506800 9506821 AAGAGATAAAGTCGGTATCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40470 FBgn0058470 FBtr0111152 1 1 1 80 3L 23927922 23927997 ATTAAATATGGGAGATGGGACG 57 23927863 23927882 ACAAATACAGGCTTTCGAGG 58 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070044 1 1 3 206 3L 23092788 23092806 CGTAACCACGTACACTGGT 59 23095374 23095392 TTGACATCTGTGTACACGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078563,FBtr0078561 2 2 2 154 3L 22939656 22943635 CATCAGAGAACGAAAGGGC 58 22943750 22943771 ACTCGTTAAAGGAATTGGACAG 58 NA Drosophila melanogaster 61 CG7407 FBgn0037134 FBtr0078440 1 1 1 124 3L 21816751 21816831 CAAGGACAAAGGCGAACTG 59 21816919 21816937 AGTTCTCTTCGTAGGCCTC 58 NA Drosophila melanogaster 61 Sfp78E FBgn0261059 FBtr0301939 3 1 1 81 3L 21676699 21676784 GACGGTAAAGAAGACTAAGTATGG 58 21676641 21676661 TGTTACCTTACAAGATGCCGT 59 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089798 2 1 3 103 3L 21521996 21522074 GACTTTAAGCTCTACTGGAAGG 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 CG7338 FBgn0037073 FBtr0078342 3 1 1 120 3L 21330046 21330064 TGCCAAGGAGAATCTTCCC 59 21330147 21330220 GTATAAACCAGGCAGAACGC 59 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0300452 2 1 2 297 3L 20466278 20466701 TTCTTTAGCAACTGCTGCG 59 20465999 20466017 CTCCAGTTTCGAAAGTGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14186 FBgn0036935 FBtr0074870 2 1 1 82 3L 20094090 20094336 CCGACTTTAATCGCAATGG 57 20094026 20094044 TATGTTCGAGATGAGCAGC 57 NA Drosophila melanogaster 61 trc FBgn0003744 FBtr0074922 2 1 1 93 3L 19825928 19825947 AAAGAAGTCGCATCGAACAG 59 19825797 19825872 CTTGGAGTCCATCGGACTG 59 NA Drosophila melanogaster 61 CG14102 FBgn0036906 FBtr0074928 2 1 1 97 3L 19793615 19793836 TGCACAGCTAGATCAATTGC 59 19793537 19793555 ACATTTGTTGGAAGGAGGC 58 NA Drosophila melanogaster 61 CG9372 FBgn0036891 FBtr0074945 1 1 1 88 3L 19600846 19600864 ATTGGTCGGATAGAAACGC 58 19600915 19601111 CAGGTTAACCTCCATGAGGA 58 NA Drosophila melanogaster 61 CG9451 FBgn0036876 FBtr0074979 2 1 1 80 3L 19492775 19492793 TGAGCACTTATCCCAACGA 58 19492649 19492733 CTTTAGCACCATTGGTGAGTG 59 NA Drosophila melanogaster 61 CG32213 FBgn0052213 FBtr0273409 1 1 1 88 3L 19468994 19469071 TCAAATACGCTGTCGTCGT 59 19469123 19469141 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 CG11577 FBgn0036847 FBtr0075034 1 1 1 60 3L 19088691 19088709 GAAGAAGCATCTCTGCGAG 58 19088649 19088667 CTTGAGGCATTCCCTTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18811 FBgn0042134 FBtr0075098 2 1 1 122 3L 18664679 18664698 CAAATACGATGCTGTCCTGG 59 18664521 18664594 TTTGCCAGGTTATCCTTGC 58 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 1 3 3 126 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748797 17748818 GCATAGATCAGCTTAATTCCGA 58 NA Drosophila melanogaster 61 CheB74a FBgn0261294 FBtr0091928 2 1 1 147 3L 17712631 17712651 ACGGTACTAAATATGGTGTGC 58 17712451 17712523 CCACGAAGTAAACAGTTCCT 57 NA Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 3 2 2 84 3L 17045161 17045180 AGTTCATACTCACCGTGTCG 59 17045227 17045831 AAGCTAATGTCAGCCTGGG 59 NA Drosophila melanogaster 61 CG32163 FBgn0052163 FBtr0075310 2 1 1 60 3L 16580511 16580530 CGAAGAACGTATTCCTTGTG 57 16580552 16580571 TTAGGGTGTGGTTACTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx8 FBgn0036643 FBtr0075365 1 1 1 82 3L 16579477 16579551 GGACCAGAACAATATCCTTGAC 58 16579416 16579434 CAATGCTCTGTGTTTCCCG 59 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 1 2 2 80 3L 16572285 16572303 GGGATATACGGCCCTTGAC 59 16572171 16572244 CGGCTGACTTAATCTTGTTACC 59 NA Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 1 2 2 86 3L 16567999 16568017 AATCGTCGACCCTCAAGAC 59 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 CG4573 FBgn0036629 FBtr0075411 2 1 1 80 3L 16409005 16409025 ATGAGAGTCGTACGAAATTGG 58 16408885 16408967 CTAGATCTAAGTTGGAGTGTTGC 59 NA Drosophila melanogaster 61 CG13055 FBgn0036583 FBtr0075482 3 1 1 113 3L 16244548 16244566 AGAGCCTTTCGCTAACCTC 59 16244453 16244471 TGAGAGCCGACTTCAAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42538 FBgn0260646 FBtr0301002 3 1 1 73 3L 16027639 16027657 ATCATGGCCTGCCTAACTC 59 16027694 16027772 AGCTGAAAGACTGGACGAC 59 NA DesignRelaxed Drosophila melanogaster 61 Eig71Ef FBgn0004593 FBtr0075584 2 1 1 149 3L 15650343 15650361 AATCCTTGCATCCGAAGAC 57 15649896 15650230 TTTCCTCTTGTGAGCACTG 57 NA Drosophila melanogaster 61 Eig71Ef FBgn0004593 FBtr0075584 1 1 1 148 3L 15650341 15650359 TCCTTGCATCCGAAGACTC 59 15649895 15650230 GTTTCCTCTTGTGAGCACTG 59 NA Drosophila melanogaster 61 CG13458 FBgn0036479 FBtr0075637 1 1 1 80 3L 15108000 15108018 GCACATGAAAGACGACCAG 59 15108062 15108151 AACATCTCGTGACCATTGC 58 NA Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075736,FBtr0075737 3 2 2 60 3L 14211496 14211516 GCGTTTACTTCGATATAGCCG 59 14211534 14211556 CGTAGTTCCATCACAATTCTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 3 2 2 108 3L 13407234 13407440 ATATTGCATCTGGTGACGC 58 13407511 13407530 ATATCCTTGATGGGTCCTGC 59 NA Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 1 2 2 107 3L 13407234 13407440 ATATTGCATCTGGTGACGC 58 13407511 13407529 TATCCTTGATGGGTCCTGC 58 NA Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075864 1 1 2 191 3L 13380693 13380778 AGTGACTTTGAGGAGTCCC 58 13380520 13380538 GAAGAACACCACCAAGCTG 59 NA Drosophila melanogaster 61 CG14111 FBgn0036350 FBtr0075841 3 1 1 62 3L 13372675 13372693 ACTTCCTTAAGCAACAGCC 58 13373097 13373115 GAGATTCAGGCTTCTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14111 FBgn0036350 FBtr0075841 1 1 1 61 3L 13372676 13372694 CTTCCTTAAGCAACAGCCC 58 13373097 13373115 GAGATTCAGGCTTCTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32119 FBgn0052119 FBtr0075867 2 1 1 181 3L 13241226 13241247 GCAGGAATCCGAATTTAAGGAC 59 13241012 13241030 CTGGAAGACAGTTGTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 3 2 2 89 3L 13035388 13035406 TCACCAAGATCGTCATGCA 59 13035458 13035550 TGATGACATCCATGTAGCCA 58 NA Drosophila melanogaster 61 CG42588 FBgn0260965 FBtr0301717 3 1 1 81 3L 12815648 12815723 GAAGCCTTTACTCTCACGT 57 12815826 12815844 TTCATAATTGCGTTGCACG 57 NA Drosophila melanogaster 61 Pbgs FBgn0036271 FBtr0076011 1 1 1 60 3L 12263606 12263626 AATGCCCTATCTGGATATCCT 57 12263566 12263584 GTACAGCGTGTGATACGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42397 FBgn0259748 FBtr0300506 1 1 1 90 3L 11966869 11966887 TTCTACTCTGTCGGAACGG 58 11966742 11966760 ATCCACTTACAAGGAGTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6163 FBgn0036155 FBtr0076181 1 1 1 99 3L 11357012 11357720 ATGTGCCGACAGTTAAGCT 59 11356931 11356951 GTGTTGAATCGATCCTTGTGG 59 NA Drosophila melanogaster 61 CG34012 FBgn0054012 FBtr0100067 3 1 1 97 3L 11102163 11102258 CTGCTAGTGCCTATGATTAACAC 59 11102088 11102106 TCCATGAAGAGCATCTCGG 59 NA Drosophila melanogaster 61 CG42536 FBgn0260644 FBtr0300949 2 1 1 88 3L 10623025 10623043 ATGCTTTGTTATTGGCGCT 58 10622892 10622973 ACCAATTCGTGTGCAAGAC 59 NA Drosophila melanogaster 61 Taf2 FBgn0011836 FBtr0076361 2 1 1 81 3L 9878986 9879004 TTAACACCTGTGGTCTCCG 59 9878863 9878942 CTAGCACAAGTTTCGCATCC 59 NA Drosophila melanogaster 61 Hsp23 FBgn0001224 FBtr0076453 1 1 1 60 3L 9375424 9375443 CATCACTCGTCACTTTGTCC 59 9375464 9375484 CACCTTATCAGCCTCATAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 3 2 2 134 3L 9007697 9007715 CATGCACAAGTATCAGCCG 59 9006711 9007599 ATGCGATCGTTCTGGTAGG 59 NA Drosophila melanogaster 61 CG13310 FBgn0035928 FBtr0076590 1 1 1 80 3L 8792052 8792154 CAGTGCAATCAAGTGTTCGT 59 8791991 8792012 CTCGGTTGTCTATATCATTCGG 58 NA Drosophila melanogaster 61 CG6662 FBgn0035907 FBtr0076652 1 1 1 97 3L 8517116 8517137 TCAAGTGTTTCTATCTGGATGG 58 8516985 8517059 TTTGGCCTCATTGTATAGCA 57 NA Drosophila melanogaster 61 CG6683 FBgn0035902 FBtr0076655 2 1 1 110 3L 8507732 8507810 AAATTCAGAAGCTAGTGCCTG 58 8507642 8507660 AGAAGACTCCAATCGGAGC 59 NA Drosophila melanogaster 61 CG33057 FBgn0053057 FBtr0076678 3 1 1 60 3L 8398033 8398051 AATCAGGGACACTCATTGG 57 8397991 8398010 GGGTAATATTCTCGAGACCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 2 3 9 268 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350938 8350957 CAAATGATGCGGGTCATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mus301 FBgn0002899 FBtr0076689 3 1 1 94 3L 8133178 8133718 GACTGCAATCGCTTATTCTCAG 59 8133773 8133791 CACAGACAACAGTGTGCTG 59 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 2 2 2 80 3L 8082830 8082850 GCTAAGGTCCATGTGTTTGTG 59 8082714 8082794 CAAGCTAGTAGTCGTATTACTTCCT 60 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 2 2 2 80 3L 7755940 7756021 GGAGAAGACCATTAAATTTGCG 58 7756059 7756080 ACCTCAACACTCTGAGTATAGG 58 NA Drosophila melanogaster 61 CG7409 FBgn0035817 FBtr0076810 1 1 1 60 3L 7747782 7747800 AATTGTCGGAAAGGATGGT 57 7747824 7747842 CTCATAGGGCTTGAACAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-SD FBgn0035806 FBtr0076807 1 1 1 60 3L 7644764 7644784 TATAAGTTACTGGGCCATCGT 58 7644806 7644824 CGTAGAGTGCTTCTCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8602 FBgn0035763 FBtr0076884 3 1 1 60 3L 7320164 7320184 TGGAATTATCGTGGATCACAG 58 7320124 7320142 GCCCATGAAGAACAACTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906 3 2 4 133 3L 7060053 7060658 ACAACTATGCAACGCATGC 59 7060752 7060773 GCAGATTGCCGGAATATTATCC 59 NA InUTR Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 1 2 4 84 3L 7059753 7059772 CATCAATCTCAAGGATCGGG 58 7059819 7059971 TAATCAGTCAGCCACTCCC 58 NA InUTR Drosophila melanogaster 61 CG14911 FBgn0035701 FBtr0076966 2 1 1 128 3L 6477543 6477561 ATGGACGATGCCTACAGTC 59 6477651 6477793 ATTGTATTTCTCGCCACACTG 59 NA Drosophila melanogaster 61 Lcp65Ad FBgn0020641 FBtr0076990 1 1 1 113 3L 6136688 6136797 CTACAAGTTTGCCGTGGAG 58 6136874 6136892 ACATAGGCATAGGATCCGC 59 NA Drosophila melanogaster 61 Lcp65Ag2 FBgn0020637 FBtr0077059 1 1 1 80 3L 6126447 6126527 AGCTTCAAATACGACTGGGA 59 6126386 6126405 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299609,FBtr0299610 1 2 2 83 3L 6059930 6059948 GATACCCGAACAGCATTGG 58 6062555 6062573 GTCATGGGTATGGAAAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10630 FBgn0035608 FBtr0077152 2 1 1 81 3L 5491876 5491897 GAGATGAAGAAGGCATTGATCC 59 5491648 5491836 TCTTCAAATTATCTGCGAGCG 59 NA Drosophila melanogaster 61 CG10673 FBgn0035590 FBtr0077180 1 1 1 60 3L 5132061 5132082 TCCAATCACATTATACATGGCG 59 5132022 5132040 CACCCTTCGGATTGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 1 2 2 80 3L 4861608 4861628 TCTACAACCTGACTTATGGCT 58 4861667 4861745 GCATGTGAGATATCTTCTCCTG 58 NA Drosophila melanogaster 61 CG33777 FBgn0053777 FBtr0091778 3 1 1 80 3L 4554689 4554770 TACCTGTCCCTTTAATGACG 57 4554628 4554648 GGGAGTACTGAAGTTACTTGG 57 NA Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 3 1 1 120 3L 4487449 4487524 CCAGGGCTATGACTATCCA 57 4487347 4487365 GTAGGAGTAGCCACTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073343 3 1 3 82 3L 4299059 4299078 TCAACTGACACCATAAGCCA 59 4298762 4299014 GTGTGGCGTGACTTTATGG 59 NA InUTR Drosophila melanogaster 61 CG15011 FBgn0035518 FBtr0073244 2 1 1 85 3L 4258170 4258188 CTTACAACCTTGCGAGTGC 59 4258050 4258123 GAGCTCCACAAACATTCTGAC 59 NA Drosophila melanogaster 61 Akh FBgn0004552 FBtr0073213 2 1 1 121 3L 4141646 4141734 CAGTGTCAATTGACCTTCTCG 59 4141817 4141835 ATCTCGAGCAGCATTTCGT 59 NA Drosophila melanogaster 61 CG14990 FBgn0035496 FBtr0073208 1 1 1 60 3L 4093274 4093294 GGTTTCGTTTCTTTGTAGTGC 58 4093314 4093400 GTTGAATATTCCAGGTGCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Scsalpha FBgn0004888 FBtr0073151 1 1 1 86 3L 3817644 3817662 AAGGGCATCATCCTGATCG 59 3817710 3817792 CTTGATGCCCGAATTGTACTC 59 NA Drosophila melanogaster 61 CG14961 FBgn0035439 FBtr0073069 3 1 1 123 3L 3330546 3330564 GAGTCCTCATAGTGGCCAG 59 3330651 3330725 CGATGACTCGTAGACCGTC 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 2 5 5 82 3L 3310690 3310776 CATTCCTGTCTGTGAAGATGTC 59 3310818 3310837 CAAAGCACCCAAGACTTCTG 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 2 3 3 80 3L 3227694 3227782 CTACTTCTCCAGGGAGAACC 58 3227823 3227843 GTGTAAATGGGCACATACTGG 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 2 3 3 80 3L 3150145 3150226 TACTTTCAGGCTTTGTTCACC 58 3150266 3150286 CTTTAGGTCATCGTACTGCAC 58 NA Drosophila melanogaster 61 CG34025 FBgn0054025 FBtr0290083 2 1 1 80 3L 2960645 2960664 GATCTGAGGTATTGCCTTGG 58 2960524 2960603 ACTCAAATAGTCACGAGAGC 57 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 2 1 3 163 3L 1803310 1803433 GGGACCTAAAGAACGTGGT 59 1803560 1803805 ATCGTCCAGAGCTTGACTG 59 NA Drosophila melanogaster 61 CG7967 FBgn0035251 FBtr0072809 1 1 1 88 3L 1652749 1652769 AAGTCCATCCAACACTTTCTG 58 1652620 1652699 TGGAGAGCATAGAGTCTCG 58 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 2 3 3 80 3L 1539120 1539207 AGAATCTGTATAGATGTCTTCCTCG 60 1539240 1539263 CCTCGTAGAGTATGTTGTATACGT 60 NA Drosophila melanogaster 61 CG12084 FBgn0043458 FBtr0072711 1 1 1 80 3L 1494255 1494597 CAGTATAGGCTTGGAGACTCTG 59 1494196 1494217 GAACCAACGGATATCATGTCAC 59 NA Drosophila melanogaster 61 CG32320 FBgn0052320 FBtr0300067 3 1 1 81 3L 1401195 1401274 TAGAACCTGGGAACTCTTCG 58 1401318 1401336 ATCTTATCTCGCGGTTGGG 59 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660,FBtr0072659 1 3 3 103 3L 1269166 1272974 TTCTTCAAGGCAAACTGGT 57 1273041 1273059 TGCTTCTCCAGTCTATCGT 57 NA Drosophila melanogaster 61 CG13893 FBgn0035146 FBtr0072562 1 1 1 85 3L 600856 600875 ACGACGATTACTTCTTGGTG 58 600656 600737 TTTCAAACTAGCTCTCAGCA 57 NA Drosophila melanogaster 61 CG13891 FBgn0035139 FBtr0072566 1 1 1 60 3L 433323 433341 GTCGCCCAGTGAAATAAGC 59 433281 433302 GTTCTCTTCTCTAATAGGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347b FBgn0083053 FBtr0113514 1 1 1 76 2R 14030550 14030571 CGACTAAGATTCATAGTTGCCA 58 14030607 14030626 TGTTATGCAGATGGTATGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30082 FBgn0050082 FBtr0087321 2 1 1 81 2R 11573195 11573273 CATTTGTTAACGGTTCGCCT 59 11573133 11573154 CATACGTCGGAATACAGAACTC 58 NA Drosophila melanogaster 61 5SrRNA:CR33367 FBgn0053367 FBtr0086359 1 1 1 60 2R 15648567 15648586 GAATACATCGGTTCTCGTCC 58 15648526 15648544 TAAGTACTAACCGCGTCCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3565 FBgn0035034 FBtr0072316 2 1 1 87 2R 20490357 20490375 CACTTGGAGTCCTTTGTGC 59 20490425 20490501 TATCGTAGACCGAGAATGCG 59 NA Drosophila melanogaster 61 CG11414 FBgn0035024 FBtr0072307 1 1 1 80 2R 20450482 20450557 GTGAGAACCAGGAATGACG 58 20450601 20450619 AGCATCAATGCTCACATGG 58 NA Drosophila melanogaster 61 slbo FBgn0005638 FBtr0072272 3 1 1 64 2R 20219999 20220017 TAATGAACCACGCCAATCC 58 20219953 20219971 GTGTTCGTTGGTGTTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3363 FBgn0034987 FBtr0072260 3 1 1 131 2R 20078138 20078157 CAAGGACACGGATAAGTCAG 58 20078251 20078329 GGTTTGTTAGCATCTGCCT 58 NA Drosophila melanogaster 61 Zfrp8 FBgn0021875 FBtr0072253 1 1 1 80 2R 20021742 20021763 CTTTCATCGGTCCATCTATGTG 59 20021803 20021879 AGGACTGTGAAATTGCTTGC 59 NA Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 1 2 2 80 2R 19946644 19946724 CAAGGACTTACTGTGCACC 58 19946767 19946786 TTGTCCAGAGCAGTATTGGT 59 NA Drosophila melanogaster 61 ytr FBgn0021895 FBtr0072234 3 1 1 182 2R 19736319 19738108 GAGTCGGCGATCTAGATCG 59 19736155 19736173 GATTTACCCTCCAGGTCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30181 FBgn0050181 FBtr0072116 1 1 1 80 2R 19426423 19426502 GACTTAGTGGTATCCTTTGGAG 58 19426364 19426382 TACATGGACCATCTCCACC 58 NA Drosophila melanogaster 61 RpL22-like FBgn0034837 FBtr0072049 3 1 1 106 2R 19135237 19135309 TTCTTTGGAGAATGAGTTCCC 58 19135151 19135169 TACAGGAGTCACCTTAGCC 58 NA InUTR Drosophila melanogaster 61 Klp59C FBgn0034824 FBtr0071975 3 1 1 60 2R 19012399 19012417 GTTCGATCTCCTGATGCCT 59 19012357 19012375 CTGCTGGTTTCTATCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9896 FBgn0034808 FBtr0071988 3 1 1 86 2R 18882462 18882480 CAAGATCTGCGGCAATGAG 59 18882337 18882412 TCCTCGCAGTAGATCTTGG 58 NA Drosophila melanogaster 61 CG9825 FBgn0034783 FBtr0071893 3 1 1 81 2R 18725374 18725450 ACTTTCCGGAATACGATTGG 58 18725493 18725512 AATTGCGTTAGGATGTAGCC 58 NA Drosophila melanogaster 61 CG13516 FBgn0040658 FBtr0100554 3 1 1 95 2R 18557549 18557658 GTTTGGTCGGATTCTGCTG 59 18557717 18557735 GGAAGGTGTTACACTTGCG 59 NA Drosophila melanogaster 61 Cdk9 FBgn0019949 FBtr0071937 3 1 1 92 2R 18524510 18524530 ATGAACGTCAAGTTCAGTCTG 58 18524370 18524456 GTGCAGGATCTTGTTGCTG 59 NA Drosophila melanogaster 61 qkr58E-1 FBgn0022986 FBtr0071843 3 1 1 96 2R 18301782 18301926 GTAAAGACGCACAGATCACG 59 18301705 18301724 TCGAGTGCTTTGATGTTTGG 59 NA Drosophila melanogaster 61 Fili FBgn0085397 FBtr0112593 3 1 1 117 2R 17817846 17821945 TAATCTCACGATGGTGCCT 58 17822025 17822044 ATGAAACAGGTTCAGGAAGG 57 NA Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071718 1 1 2 106 2R 17691064 17691130 TTGGACAATTTGCAGGTCG 59 17691200 17691218 TACCATTGGAGGACATCGT 58 NA InUTR Drosophila melanogaster 61 CG30392 FBgn0050392 FBtr0071618 3 1 1 106 2R 17179225 17179243 AGAACCATGCTGGATTACG 57 17179077 17179155 TAGACAAAGTCAAGACCGC 57 NA Drosophila melanogaster 61 CG15658 FBgn0034602 FBtr0071583 1 1 1 90 2R 17085588 17085609 GGACATTAAGTTTCTGATGCTC 57 17085660 17085743 ATCAATTTCCTGGAGCGAG 57 NA Drosophila melanogaster 61 Magi FBgn0034590 FBtr0071636 1 1 1 81 2R 17017799 17017877 GACAATAGGGAAACTAATACCCG 58 17017740 17017758 GTTTACTGCCACTATGCGA 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0071527,FBtr0301900,FBtr0301894,FBtr0301898,FBtr0301895,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0301901,FBtr0301896,FBtr0071528 2 15 15 123 2R 16911516 16911534 CATTTACTTGGAAGGCGCT 58 16911620 16911696 AAGAATGATGGCTGGTTCCT 59 NA Drosophila melanogaster 61 CkIIbeta2 FBgn0026136 FBtr0086278 3 1 1 211 2R 16177538 16177560 CCCATTGGTTTGAGTGATAATCC 59 16177730 16177843 TTAAAGCCATAAAGCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11208 FBgn0034488 FBtr0086322 1 1 1 85 2R 16130605 16130686 TACCCAAATCACACCACCA 58 16130538 16130556 AGAAGTAGCCCTTCATGCC 59 NA Drosophila melanogaster 61 CG11099 FBgn0034485 FBtr0086315 1 1 1 80 2R 16124408 16124427 TGGGTCTCCTGTTGAATCTC 59 16124470 16124546 GCAAACCACTTAGCTCCAC 59 NA Drosophila melanogaster 61 Obp56i FBgn0043532 FBtr0086337 2 1 1 80 2R 15755671 15755748 AACATGTTTCGTACAAGCAG 57 15755791 15755809 CGATTCGCAACATCTTGTG 57 NA Drosophila melanogaster 61 Ir56d FBgn0034458 FBtr0086497 2 1 1 60 2R 15400425 15400445 TGAAGGGCTATTTGGTAAGGA 58 15400385 15400403 TCCGATTTAAAGACCCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 2 2 2 81 2R 15249503 15249525 CTTACTTCATCTACTTCTCGTGG 58 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 CG18606 FBgn0034428 FBtr0300592 1 1 1 64 2R 15175934 15175955 GGTCATACTTTCCAAATGTCTC 57 15175980 15175998 TGGTGATGAACAGAGTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0100137,FBtr0299568 3 2 3 216 2R 14946980 14947108 CAATCAAATAAACGCTGCCT 57 14947376 14947396 GTGGTAATGGTACTATTGGCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 3 2 2 133 2R 14617038 14617256 GTACTTTGAACGTGAGATCCT 57 14616925 14616943 TCTTAATGCCGCGAATGAG 58 NA Drosophila melanogaster 61 CG15071 FBgn0034377 FBtr0086605 1 1 1 60 2R 14584602 14584622 GCCAATATACAGTGAATGCTC 57 14584642 14584662 CGATACAATTGGGCATTTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5224 FBgn0034354 FBtr0086697 2 1 1 101 2R 14391269 14391288 CCCATCCTCTATTACGCTCC 59 14391352 14391766 CTTTACGTTGACCAGTCGC 59 NA Drosophila melanogaster 61 CG5190 FBgn0034351 FBtr0086696 2 1 1 60 2R 14339742 14339762 GTCACTTACAACCCAGATGAC 58 14339782 14339802 CGTTGTTCATAGTGTCTACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5721 FBgn0034315 FBtr0086771 2 1 1 101 2R 14071387 14071407 AAGAGACCATCAAGCAATTCG 59 14071251 14071270 TTTCGTTGATGACAGGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5726 FBgn0034313 FBtr0086772 1 1 1 80 2R 14067022 14067042 TGAACTCCAAGATCAAGACCA 59 14066025 14066981 ACTCCATTGACTCACAAAGC 58 NA Drosophila melanogaster 61 thr FBgn0003701 FBtr0086825 2 1 1 82 2R 13751944 13752020 AACAAATGTGAGCCCTCAC 58 13751880 13751898 GACCCAAACACTTCATGGT 58 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 3 3 3 84 2R 13577312 13577390 GATCTTGAGATCCAACGACTC 58 13577435 13577454 GATCTGATGGGTAGGTTCCT 58 NA Drosophila melanogaster 61 CG42649 FBgn0261501 FBtr0302392 1 1 1 62 2R 13486972 13486990 GATATACACCGAGGCTCCA 58 13486928 13486946 CCTACTTCTTCCAACGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14479 FBgn0034228 FBtr0086952 3 1 1 60 2R 13390241 13390259 AGAGTTCAGCACTTCACGT 59 13390199 13390217 AGTTGAGCGATCAGTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6550 FBgn0034214 FBtr0086961 2 1 1 81 2R 13313871 13313951 CATGTTCCTGTACAGAGTGGT 59 13313810 13313828 CAACGTGCTCAAAGTCCTG 59 NA Drosophila melanogaster 61 CG6568 FBgn0034210 FBtr0086964 1 1 1 80 2R 13294430 13294450 AACAACAAAGATGACTGGAGC 59 13294297 13294388 AGAACGGGATATCCCACTG 58 NA Drosophila melanogaster 61 Cbp53E FBgn0004580 FBtr0087056 3 1 1 81 2R 12873644 12873662 CGATTTGCTCAAAGAGGCC 59 12873704 12874094 TACTTGGAGCATAGTATCGGTG 59 NA Drosophila melanogaster 61 CG6472 FBgn0034166 FBtr0087046 2 1 1 142 2R 12771586 12771605 TACTTCGTGGAGAGCATAGC 59 12771710 12771785 AATTTGCCACGAATCCTGG 58 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 2 6 6 80 2R 12676157 12676302 CTACTACACTATAGCAGCCTCG 59 12676343 12676361 TCCAACTGCTTGATGGAGG 59 NA Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 1 2 2 83 2R 12153288 12153306 AACTCTATCAGGATGCCGT 58 12153351 12153431 GCATTACAACTGTCAGTTTCG 58 NA Drosophila melanogaster 61 CG8405 FBgn0034071 FBtr0087210 3 1 1 80 2R 11936188 11936266 GAAGAGGATGATGAAGAGCAG 58 11936308 11936326 CTTTCGCGTGGATGAAGAC 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0302163,FBtr0301313,FBtr0100388,FBtr0100387,FBtr0087315 1 6 7 80 2R 11669323 11669342 AGCGATGAATCTATTGCGGA 59 11668569 11669280 CTTCTTGAAGTTGACGCCG 59 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 1 2 2 72 2R 11575756 11575779 CTCAATATAACACAGAGTTCGAGC 59 11575643 11575725 AGCAGCTTTGTGTTCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8160 FBgn0034011 FBtr0087389 2 1 1 95 2R 11215667 11215743 TTAATGGTTGTCCTGTTCGC 58 11215591 11215609 TGGAACGGATCTCAAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10265 FBgn0033990 FBtr0087421 3 1 1 130 2R 10880920 10881024 GACAGGAGATTCACATCTACGA 59 10880811 10880829 CTTTGGTATGGTCTGCACG 58 NA Drosophila melanogaster 61 Cyp317a1 FBgn0033982 FBtr0087405 3 1 1 60 2R 10787894 10787912 GATAAGGAACTAGGTGCCC 57 10787935 10787954 TCAAGAAGACAACTGCATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp50d FBgn0050074 FBtr0087554 3 1 1 81 2R 10260705 10260778 CGGATGTAACTGCCTTGAG 58 10260821 10260841 AAATACTGACTGCACTTGGAG 58 NA Drosophila melanogaster 61 CG8617 FBgn0033925 FBtr0087561 2 1 1 192 2R 10244656 10244674 CAGCCAGTACATGGAGGTC 59 10244297 10244315 CATTGTGTAGCAACGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 mam FBgn0002643 FBtr0087598 3 1 3 131 2R 9925840 9925862 GACTCTTAATGTCCGAACTACTC 58 9926239 9926257 CATTGTCAACATCCTCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6704 FBgn0033887 FBtr0087609 2 1 1 83 2R 9857799 9857866 CGGATTAAATCCCTGGCTG 58 9857734 9857753 CGCAGAAAGAGTACATTGGA 58 NA Drosophila melanogaster 61 CG30484 FBgn0050484 FBtr0087639 1 1 1 60 2R 9735591 9735611 AGCACAAGTAATTCGTTCTGG 59 9735632 9735651 TCTCATAAAGCGAAGTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr50Ca FBgn0033867 FBtr0087629 3 1 1 84 2R 9658511 9661706 CCACCTTAATGCTACTGATAATGAC 59 9661746 9661766 GTTTCTAGGGATGGTAAACGC 59 NA Drosophila melanogaster 61 Cyp9h1 FBgn0033775 FBtr0087820 2 1 1 109 2R 8729387 8729406 AGATAACGAGTTCTTCCGCA 59 8729168 8729315 TGCGGAGAACCTTCATCAG 59 NA Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 2 2 2 100 2R 8668886 8671860 GAACCAACTCAGGGAGGAG 59 8671924 8671942 GGATCTCGGAGATCGTCTG 59 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 2 3 3 92 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527568 TGCGGAGAAGCTCTTATAGC 59 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917,FBtr0087916 2 3 3 92 2R 8275435 8275818 GAAAGTATAGGTCGCTATCATCAC 59 8275868 8275887 GGGATAGGGAATGTGATGGT 59 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087957 1 1 4 81 2R 8229277 8232034 GCTTAGCGGAGCAATAACAC 59 8229215 8229236 GCTACTAGGACTCAGAATTGGA 59 NA InUTR Drosophila melanogaster 61 CG13163 FBgn0033712 FBtr0087896 3 1 1 107 2R 8209147 8209228 CATGTTCAAACTAGTCACAGC 57 8209296 8209315 ATGGTAAGGGATTTCTCCGT 58 NA Drosophila melanogaster 61 CG13163 FBgn0033712 FBtr0087896 1 1 1 106 2R 8209147 8209228 CATGTTCAAACTAGTCACAGC 57 8209296 8209314 TGGTAAGGGATTTCTCCGT 58 NA Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088036 3 1 2 75 2R 7779891 7781085 GTGTAATCATCCAACATGGGC 59 7781122 7781140 ACTTACCGGAATCGACGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ths FBgn0033652 FBtr0088030 3 1 1 169 2R 7695554 7697411 AGATTAGTTGGCATGAGGGAG 59 7697542 7697560 AACATGTAGCAGGCATCGT 59 NA Drosophila melanogaster 61 CG7745 FBgn0033616 FBtr0088119 1 1 1 93 2R 7195547 7195565 GTACGAGACGAAGGACGAG 59 7195680 7195698 TTCGCGTAGGTACTTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18335 FBgn0033610 FBtr0088177 1 1 1 90 2R 7178420 7178438 AATGGACCACGCTATAACG 57 7178285 7178303 ATAAGTTCGACCCACTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9067 FBgn0033605 FBtr0088182 1 1 1 80 2R 7166602 7166622 AAATCTCCACTTGCTCTACAC 58 7166478 7166562 TCGAACTTCTTTGAAGTCAGC 59 NA Drosophila melanogaster 61 CG12942 FBgn0033569 FBtr0088236 2 1 1 80 2R 6782996 6783071 GCTGAAATCCAATGGAATAGAGG 59 6783110 6783129 GGTATATTACCCGTCGTGCT 59 NA Drosophila melanogaster 61 cag FBgn0017414 FBtr0088239 2 1 1 84 2R 6781292 6781369 GCCAAGAGGTTTAACATTGGA 58 6781228 6781246 CTCCACTCAACAGACCCTC 59 NA Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224,FBtr0088225 3 2 2 157 2R 6707587 6707607 GCTGAAATCTGCAAGATATCG 57 6707788 6707806 TGATTAAGGTTGTGCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088353 2 1 3 225 2R 6245024 6245042 GAGATCGCTCTCCAGATCC 59 6243981 6244001 CCTATTCCTTGCCTTTCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 2 1 1 104 2R 5733919 5733937 CGCACGACTGGAATTTCAG 59 5733777 5733851 TCTCTAGCACGTTTGGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30338 FBgn0050338 FBtr0088533 3 1 1 195 2R 5481652 5486092 ACCAATTGACAAGCCATGG 58 5486251 5486269 ATAGAAGGCTAGTAGCGGG 58 NA InUTR Drosophila melanogaster 61 Map60 FBgn0010342 FBtr0088530 2 1 1 80 2R 5478740 5478758 GTGGAAGCTCTTCAGTCTG 57 5478800 5478884 ATGGGTACTTGATCATTCTCC 57 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 2 3 3 102 2R 5475201 5475289 AAGGGTATCAGGTCCACTC 58 5475352 5475373 CATAGGTCACGTAAGTGTACAG 58 NA Drosophila melanogaster 61 CG8078 FBgn0033375 FBtr0088631 1 1 1 142 2R 4985781 4985799 AGGCAGAGATCCATCACAC 59 4985605 4985623 CAGACCGTAGTTATGGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34350 FBgn0085379 FBtr0112560 2 1 1 80 2R 4885424 4888899 CTTAGCACAGTTCCAATCTGG 59 4885364 4885382 ATACAGATGCCAGAGCGTC 59 NA Drosophila melanogaster 61 CG8248 FBgn0033347 FBtr0088678 3 1 1 89 2R 4807089 4807109 CCCATTATTTACCTGTTCGCC 59 4806963 4807040 TTTGTTCTGCGACTTGTAGTG 59 NA Drosophila melanogaster 61 Lcp2 FBgn0002533 FBtr0088761 2 1 1 151 2R 4321951 4322034 TCAAGTTTGTGATGATTCTCGC 59 4321821 4321839 GATTCCGTTTGAGGTGTGC 59 NA Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088932 1 1 3 89 2R 3629422 3665995 GTATCCCATAATGCAGTGCG 59 3629352 3629370 TCGATCTGGTAGACGTCCA 59 NA Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088906 3 1 2 153 2R 3422590 3422847 AAATTAAATCTCATCCCGGTGG 58 3422961 3422979 CTTGTCCTTTCGCTCTCCA 59 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 2 3 3 188 2R 3414781 3414799 AAGCCCAAGATCCTCATCG 59 3414544 3414562 GTACAGGCATTCGTTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300476,FBtr0088996,FBtr0300481,FBtr0300479,FBtr0300480,FBtr0300478 2 8 8 97 2R 3360841 3361235 TTTGACGATACGTTGCAACG 59 3358358 3358376 CAACGCAGCAAATTCTCCA 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302578,FBtr0302034,FBtr0302579,FBtr0302035,FBtr0113470 2 6 6 95 2R 2821425 2821582 ATATCACGAAAGAGCTGTCC 57 2821349 2821367 ACATGTTCACATAGGTGGG 57 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 2 11 11 89 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764847 2764865 GAACATCCTTGACATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 tomboy40 FBgn0033074 FBtr0085994 2 1 1 60 2R 2113465 2113484 TTATGGTGAACAAGGGTCTG 57 2113504 2113525 GAATTCATGTTAATGGTGTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 1 2 2 80 2R 2126346 2126367 AGGATTCAGTCACAGCTATACG 59 2126405 2126498 TTTGCATACAACTGTATGGGTC 59 NA Drosophila melanogaster 61 CG8245 FBgn0033031 FBtr0086036 1 1 1 95 2R 1556838 1556857 ACAGCCATCTATGGTAGGGA 59 1556912 1556994 AATTGATTCCTCCACAAACCAC 59 NA Drosophila melanogaster 61 TpnC41C FBgn0013348 FBtr0086102 3 1 1 95 2R 954421 954493 AGCAAACTGCATTACTACGT 58 954345 954365 ACATGCTAAGTATCGTACCCA 58 NA Drosophila melanogaster 61 snRNA:U4:25F FBgn0041719 FBtr0079108 3 1 1 64 2L 5565660 5565678 CTGAGCTGCGATTATTGCT 58 5565706 5565724 TCGTAGATCCTTACGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4:25F FBgn0041719 FBtr0079108 2 1 1 64 2L 5565659 5565677 ACTGAGCTGCGATTATTGC 59 5565705 5565723 CGTAGATCCTTACGCTGGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 1 3 3 92 2L 22428911 22428929 TACAGATCGCCTATGCTCG 59 22428777 22428855 TCAATCCAACCTGGATCCC 59 NA Drosophila melanogaster 61 Tif-IA FBgn0032988 FBtr0085955 3 1 1 80 2L 22253617 22253635 TGTAATTCGACATGCTGCG 59 22253678 22253757 AAAGTAACAGTGCTAAGCGG 58 NA Drosophila melanogaster 61 His4:CG33873 FBgn0053873 FBtr0091877 1 1 1 60 2L 21524498 21524516 CGTAATTCGTGATGCCGTG 59 21524456 21524475 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm10 FBgn0032929 FBtr0081475 3 1 1 120 2L 21181117 21181135 AAGATGTCCCGACGTTCTG 59 21181277 21181297 GAACTGCAGTAAATGTTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14400 FBgn0032896 FBtr0081449 3 1 1 60 2L 20857592 20857611 GTTATCTCATCCGCGAACAG 58 20857551 20857570 AACAGATCAGAGCAGTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11019 FBgn0040998 FBtr0081359 3 1 1 79 2L 20427169 20427187 AAGACCGATTCCATAACCG 57 20427227 20427248 GGAATATAGCTATTGCCAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40169 FBgn0259995 FBtr0100178 3 1 1 108 2L 20238694 20243219 GAAGAGCAGTGGTTCTTGC 59 20243290 20243309 GACTTTCACTCATCAGTCCG 58 NA Drosophila melanogaster 61 CG10721 FBgn0032846 FBtr0081333 2 1 1 60 2L 20092581 20092599 GACTACACGTGTGATTCGC 59 20092622 20092641 TTTCATCCACCGATATGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotF FBgn0044811 FBtr0081310 3 1 1 123 2L 19912243 19912319 TTCTATTTGGCTTCCTGCTG 58 19912139 19912157 CTATCGACCTCTGAGTTGC 57 NA Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081316 2 1 2 82 2L 19794634 19794656 GTCTACGATCTATATGTTCCCGA 59 19793394 19794597 GGAATCACACTTAAGTAGTTGTCG 59 NA Drosophila melanogaster 61 CG10466 FBgn0032822 FBtr0081291 2 1 1 114 2L 19792441 19792517 GAAAGTCCAAGGGCTTCTG 58 19792595 19792613 ACGTGATCGACCCTTAGTG 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 1 5 7 114 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569163 19569185 GGTTTCTCTACATAGGTATGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hk FBgn0001202 FBtr0081180 1 1 1 103 2L 19033335 19033354 CTATAGCTTGCTGGAGTGGT 59 19033196 19033269 ACTGGTTAAGAGCCTGAGC 59 NA Drosophila melanogaster 61 bsf FBgn0032679 FBtr0081087 1 1 1 104 2L 18453462 18453480 GAGCCACTAGGATTCTGGA 58 18453310 18453394 ACTCCAAATCATTGGCCTG 58 NA Drosophila melanogaster 61 CG31784 FBgn0051784 FBtr0302499 1 1 1 80 2L 17124157 17124175 TGTTCAGCATCGTTTGCAG 59 17124033 17124051 TATTCAAGGACACGGAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31809 FBgn0051809 FBtr0113414 1 1 1 80 2L 16854765 16854783 TCAGGGTCTTAACCTGGTG 58 16854640 16854724 TTATATTGGCTCCCAATCTCGT 59 NA Nonspecific Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 3 2 3 197 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511263 16511281 CATGATAGCTCATCGGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 1 2 3 197 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511263 16511281 CATGATAGCTCATCGGCAG 58 NA Drosophila melanogaster 61 pkaap FBgn0040079 FBtr0080826 1 1 1 81 2L 16290139 16290158 TCGCTGACTTTCTAAAGTCG 58 16290199 16290289 GGATGAGTGGTGGAATTATCTC 58 NA Drosophila melanogaster 61 CG42586 FBgn0260954 FBtr0301740,FBtr0301741 1 2 2 79 2L 14741706 14741791 TGATCCTCTTCATTGCCCT 58 14741645 14741663 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15286 FBgn0028531 FBtr0080625 3 1 1 60 2L 14339084 14339102 GAGTGGGATACAGGAGAGC 59 14339124 14339144 CTCTTCCACAATGACATTACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimB2 FBgn0028543 FBtr0080618 3 1 1 128 2L 13966007 13966520 CTACAAGGAAGTTCCAACCG 58 13965898 13965916 TAGATGTGCGGATTTCGCT 59 NA Drosophila melanogaster 61 CG7968 FBgn0028532 FBtr0080551 2 1 1 113 2L 13849607 13849689 GAGAACTTTGGTTGCAATGG 58 13849762 13849783 CATGTCGAACTTAATGGTATGC 58 NA Drosophila melanogaster 61 CG9263 FBgn0032530 FBtr0080515 2 1 1 60 2L 13542197 13542216 AATTGGTACGGATGGATGTC 57 13541968 13541986 TCTCAACATCGTCTTCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517 2 1 2 93 2L 13449362 13449447 CCGATATCAAGCAACGTGAG 59 13449288 13449306 ATGTCATTGGCAAAGGTGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 3 1 1 81 2L 13257052 13257070 GGAAATATGGACGTGCAGC 59 13257115 13257190 CCACTGCAGGAATCTTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 kek4 FBgn0032484 FBtr0080485 2 1 1 100 2L 13213082 13213100 AGACAATCAGGCGGAATCC 59 13212935 13213021 CGAGCTCATCTTTCTGTTTGAG 59 NA Drosophila melanogaster 61 CG17024 FBgn0032437 FBtr0080371 3 1 1 85 2L 12454485 12454591 GGTAATCCTATGTGTTCTGTTTAGC 60 12454631 12454652 CCAGATTATTAATCACCGCCTC 59 NA Drosophila melanogaster 61 Oatp33Ea FBgn0032433 FBtr0080384 3 1 1 80 2L 12443060 12443079 GGCTTCATGACCTTTCTCAC 59 12442938 12443017 GGGTCCAACGATAATCGTG 58 NA Drosophila melanogaster 61 CG6579 FBgn0032422 FBtr0273342 1 1 1 214 2L 12177671 12177689 TTCAGTTGTTCAGCGTCTG 58 12176906 12176924 AATCGATCTTGTCCTTGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14947 FBgn0032406 FBtr0080297 1 1 1 60 2L 12076942 12076960 GTCAAGCCTTTGGGAACAG 59 12076984 12077002 GATGCGGTAATCCTCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6785 FBgn0032399 FBtr0080307 1 1 1 80 2L 12042378 12042396 CTCCAGTCGCTACTCATCC 59 12042224 12042335 GATAAGGCGATCTGCTAGGA 58 NA Drosophila melanogaster 61 Rh5 FBgn0014019 FBtr0080291 2 1 1 81 2L 12008612 12008633 TCTACATTGCCTTTATCGTCCT 59 12008670 12008751 GATTTCGAAGTCGAGAATATCCAG 59 NA Drosophila melanogaster 61 CG12517 FBgn0032311 FBtr0080144 1 1 1 69 2L 10870278 10870296 CATCTGTATCGAACGCTCG 58 10870327 10870347 GTAAATCCCATTATCCGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ial FBgn0024227 FBtr0080180 2 1 1 81 2L 10857783 10857856 CATACGGACAGCCATACGA 59 10857720 10857739 TAGACACGTCCAAATTTGCC 58 NA Drosophila melanogaster 61 CG17134 FBgn0032304 FBtr0080140 3 1 1 60 2L 10820944 10820965 CCATGAACAATGAGTACTACGG 59 10820985 10821004 ATGTTGAATCTCTGCTCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17107 FBgn0032281 FBtr0080107 2 1 1 263 2L 10682016 10682034 TTCTAATCTTCGCCCTGGT 58 10682261 10682279 ATCCATGTCTGCCATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6144 FBgn0032259 FBtr0100565 1 1 1 213 2L 10488974 10489055 TTTGAAGTGCGAAAGTGCC 59 10489232 10489250 TGTCCACATAGGTCTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 3 2 2 83 2L 10440042 10440063 TGCCCTTCATAGATGTTACTCC 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG33303 FBgn0053303 FBtr0080052 1 1 1 73 2L 10375166 10375184 AACAAGATCACCCTGGGAC 59 10375055 10375077 TTCTCATAGTGGATGACTAGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5037 FBgn0032222 FBtr0079992 3 1 1 81 2L 10332609 10332627 TGGACGTCACGAACTACTG 60 10332670 10332754 TCATGAAACTTGTACGCAAGG 59 NA Drosophila melanogaster 61 Ror FBgn0010407 FBtr0079978 1 1 1 80 2L 10253066 10253151 TTATTGCAGAAATCCTGGAAGC 59 10253189 10253210 CAAAGTTCGATTATGCGTTCAC 59 NA Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 3 1 1 62 2L 10050586 10050605 GTTCACTTCCCACACTTCAG 58 10050630 10050707 AAAGACTCATGAAACGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4438 FBgn0032115 FBtr0079813 3 1 1 197 2L 9397897 9397915 TTTCTACGGCTCTTTGCAG 58 9397658 9397677 TAATCGTCCTCTGACTCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 3 2 2 92 2L 8996808 8996826 ACCTACATCAAGAGTGCCG 59 8996671 8996755 CAGTGCCATATTCTTCGATGTG 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 3 2 2 183 2L 8992352 8992373 CCACCATCTACTTCATAAAGCC 59 8992788 8992863 CATTCCTGGCATGGAAGGA 59 NA InUTR Drosophila melanogaster 61 CG9468 FBgn0032069 FBtr0079741 1 1 1 80 2L 8779026 8779046 GGTTCACTCACTGAAGAATGC 59 8778902 8778985 AGTTTGACTTGCGAAGTCTG 58 NA Drosophila melanogaster 61 CG31897 FBgn0051897 FBtr0079673 3 1 1 60 2L 8443791 8443809 AATGCGACTTAGGAAGCAC 58 8443833 8443851 GGACTCGTCTTCAATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31898 FBgn0051898 FBtr0079662 3 1 1 60 2L 8401055 8401076 AGCTATACCGAATCTTCTCCAG 59 8401095 8401115 GATACTGCCTAGGACTTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8292 FBgn0032004 FBtr0079632 2 1 1 85 2L 8217613 8217694 TGTGGCAGTATAACGATCCC 59 8217547 8217565 GGAACCCTCCTCAAATGGT 59 NA Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 3 2 2 66 2L 8210589 8210607 GAACAATCTCGACTGCCAG 58 8210465 8210560 TGACTTCTCCTCATCCTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 CG31633 FBgn0051633 FBtr0079325 3 1 1 82 2L 6655121 6655139 GAACCGCGCTCTAAATCAG 59 6655001 6655075 AGTGCTTCGAAACCAAGTC 58 NA Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 1 1 1 69 2L 6558589 6558954 TCTGCGAAGAGGATCAGAC 58 6558987 6559005 CACTCACAACGTTTCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 WDR79 FBgn0031782 FBtr0079210 3 1 1 75 2L 6127549 6127623 CGATATGGACGAATCGGTC 58 6127492 6127510 GCTCACGTTGTGATTCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 2 2 2 83 2L 6072602 6072620 CATAGATTCCGCGCTATGG 58 6072666 6072742 TGTTGTGAGGTAAAGATGGG 57 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0112945 3 1 4 109 2L 6048215 6048233 GAGGAAACTAATCGAGGCG 58 6047771 6048142 TGAGCTGAGCGTATTTCTC 57 NA InUTR Drosophila melanogaster 61 mtm FBgn0025742 FBtr0079223 3 1 1 129 2L 6035375 6035394 AGTTCAACAACGCATTTGAG 57 6035210 6035283 TTGTGCTTGAGATCTTCGG 57 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 3 3 3 80 2L 5770060 5770080 GTCTGGTCAAGAAGTTTCTCG 59 5769931 5770020 CCAATGGAAATACTCTGGGTG 58 NA Drosophila melanogaster 61 TpnC25D FBgn0031692 FBtr0079063 3 1 1 135 2L 5218740 5218758 TTACATCACCACCTCAACG 57 5218854 5218937 CTCCATGAATTCATCAAAGTCC 57 NA Drosophila melanogaster 61 Sfp24F FBgn0259958 FBtr0300304 3 1 1 81 2L 4441918 4441990 CTAGAAATGTTGCCGGAGC 59 4441855 4441876 ATGAGATAGTAACTGTTCCCGA 58 NA Drosophila melanogaster 61 CG15425 FBgn0031591 FBtr0077471 2 1 1 67 2L 4258163 4258240 CATAGTGCTTGCAAACGGG 59 4258270 4258289 TTACTCATGTACGTGGGACC 59 NA DesignRelaxed Drosophila melanogaster 61 Dot FBgn0015663 FBtr0077532 3 1 1 82 2L 3620376 3620513 AATTGGCGCTTCTATGTCAC 59 3620558 3620576 ACAATGCACCGATTCAGTG 58 NA Drosophila melanogaster 61 Sr-CIV FBgn0031547 FBtr0077560 3 1 1 163 2L 3523273 3523291 TCCTATCGCCACTGTATCC 58 3523062 3523146 GTCGAACTTGTAGGGATGG 57 NA Drosophila melanogaster 61 CG12795 FBgn0031535 FBtr0113019 2 1 1 173 2L 3453115 3453139 GATTTCAGTCCATATTCAAGACCTC 59 3453270 3453438 CGTCTTCGCTCATATTGCC 59 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638,FBtr0112641,FBtr0112639 2 3 3 80 2L 3364929 3365434 GATTGTGGACTACTCGTGTG 58 3364868 3364886 AAGCAGACGTAGTTCTGTG 57 NA Drosophila melanogaster 61 CG8838 FBgn0031526 FBtr0077588 3 1 1 60 2L 3358227 3358245 AGTTCCACTCAGTTGAAGC 57 3358268 3358287 CCTTAGCTGTAGATTCTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3326 FBgn0031519 FBtr0077603 1 1 1 88 2L 3318317 3318465 CAACCGGCTATAATATTCATAGACG 59 3318253 3318271 TTCTTCAGGCGTAGAGTGC 59 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 2 3 3 108 2L 2866730 2866820 CTGGAAGACCAAGGTTCCA 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 Taf10 FBgn0028398 FBtr0077717 2 1 1 236 2L 2768061 2768079 AGACTCGCCACTAATGCAG 59 2768338 2768356 TCCGAGATGAACTTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Trn-SR FBgn0031456 FBtr0077715 2 1 1 80 2L 2760078 2760097 CTCTTCCAAGGCAACAATCC 59 2760136 2760228 CCAAGAATAGATCGACTTCTGGA 59 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0273435,FBtr0077702 3 2 2 165 2L 2671867 2671888 GCAAATCGGTTGTCTAATTTCG 59 2672012 2672087 AGCTGCAAACATACTACTCAG 58 NA Drosophila melanogaster 61 CG9886 FBgn0031428 FBtr0077770 3 1 1 153 2L 2421887 2421905 AGCATGGCATACTGGATCC 59 2422019 2422096 TGGCCAGAAACTTTAATGACTG 59 NA Drosophila melanogaster 61 CG17234 FBgn0042187 FBtr0077753 3 1 1 60 2L 2253465 2253484 CACAAGCAAAGTTCAACCCA 59 2253505 2253525 GGCAATCGATCTAGGATAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31686 FBgn0051686 FBtr0077752 2 1 1 60 2L 2245141 2245160 TCATCTGAAGATTCCTCCGA 58 2245181 2245201 ATCCTTCCTCTGATTCCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 1 1 1 104 2L 1755387 1755468 TTTGAATGAATTCGCATGGC 58 1755302 1755323 CTGGTGATGATCATTTGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 1 2 2 80 2L 1359510 1359531 TCGACGGATTTCATAGAGAAGG 59 1359402 1359472 CTTTACAGTACCAGTTTGGGTG 59 NA Drosophila melanogaster 61 CG42329 FBgn0259229 FBtr0299796 1 1 1 80 2L 1227749 1227833 TGGACTATAGCTGTGTTTCCA 59 1227874 1227893 TCGAGGTCTTAAGCAACTGG 60 NA Drosophila melanogaster 61 Syx16 FBgn0031106 FBtr0077330 3 1 1 122 X 20264476 20264494 CCTTCTAAAGCACTCGGTG 58 20264310 20264392 GGCTTGATCTTAGACATGGTG 58 NA Drosophila melanogaster 61 Muc11A FBgn0052656 FBtr0089803 2 1 1 109 X 11953909 11954412 GTGTTGCTAGTGTTGACCG 59 11954485 11954503 TGATAGGAGAGTGGTCCCA 59 NA Drosophila melanogaster 61 Tsp3A FBgn0040334 FBtr0070445 1 1 1 60 X 2512918 2512936 CTGTGGCCTCAGTAATTCG 58 2512769 2512787 GCTGCAGTTGAAGTACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13364 FBgn0026879 FBtr0070159 3 1 1 77 X 519119 519200 AGTATAAGCGAGCAAGTATGTC 58 519063 519081 CTTTGGAGTCCTTCTTCGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089926 1 1 2 80 3R 25684548 25684568 AGGACTCTTTCTGCAATAACG 58 25684364 25684507 ATTAGCGTCCATTGTCATCG 58 NA Nonspecific Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 3 2 2 88 3R 24970282 24970363 CGACCTTCTAAAGAACTATCTGC 59 24970411 24970429 TGTCCTCTGATTCGTCCTG 58 NA Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095,FBtr0085096 2 2 2 60 3R 22692019 22692037 GAACTACGATGCTGTGGTC 58 22691921 22691939 CATCTCCACGAACAGAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 TwdlP FBgn0039435 FBtr0085058 2 1 1 60 3R 22446895 22446913 CAGTTAGCTATAGTGCCGC 58 22446853 22446873 GCATAGAAGCTGTAGAACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps45 FBgn0261049 FBtr0082070 2 1 1 88 3R 5389762 5389783 CGGCATTAAGTTGTACATCGAG 59 5389829 5389913 TTATACTGGTCGTCTCCTTGTC 59 NA Drosophila melanogaster 61 CG34032 FBgn0054032 FBtr0100087 2 1 1 80 3L 12883559 12883645 GAGTGCCAATCAGATCAGC 58 12883689 12883707 GATGATGCTGTTTCGGGTG 59 NA Drosophila melanogaster 61 CG12521 FBgn0040816 FBtr0076074 2 1 1 76 3L 11840689 11840707 GATCAATTCGCAAACCGAG 57 11840631 11840649 GCTTATACGACTTGTGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076264,FBtr0076263 1 3 3 80 3L 10680192 10680211 GCAATTCTGTTTCCATCACG 58 10680253 10680347 AGCGATCATTCTTCTGATCG 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 2 7 7 148 3L 7811288 7811308 ATAGCAAAGAGATCATCTGCC 58 7810754 7811179 GTCGGCATATTGTGTTACCT 58 NA Drosophila melanogaster 61 LanA FBgn0002526 FBtr0077014 3 1 1 80 3L 6204765 6204841 CAAGTTCACGATTACGACCG 59 6204704 6204724 TCATTGTACTGCTTCAAGGGA 59 NA Drosophila melanogaster 61 CG13893 FBgn0035146 FBtr0072562 3 1 1 87 3L 599619 599698 GAACACCACTTACACGGTG 58 599550 599568 CTCAGAGATGAGGTCCACC 58 NA Drosophila melanogaster 61 snoRNA:229 FBgn0065073 FBtr0091664 3 1 1 105 2R 18961458 18961476 AGAACATGGCATCATGTGG 58 18961371 18961390 ATTCTAAGCAGCCCTTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13488 FBgn0034670 FBtr0071723 1 1 1 87 2R 17839263 17839354 CATGTGTAGCTTGCTGACC 58 17839404 17839423 CAGAGCGTAATCTGATTGCA 58 NA InUTR Drosophila melanogaster 61 LSm1 FBgn0261067 FBtr0071628 1 1 1 103 2R 17057881 17057899 CATCGAGCGGATACATGTG 58 17057734 17057814 TTTCACGGTCTATTTCGCC 58 NA Drosophila melanogaster 61 CG18604 FBgn0034378 FBtr0086606 1 1 1 85 2R 14590175 14590286 GATCAGTTTGCCAGGTTCG 59 14590335 14590353 GAACTTCGATGTCATGGCC 59 NA Drosophila melanogaster 61 GstE3 FBgn0063497 FBtr0086671 3 1 1 60 2R 14288428 14288447 CCGCTCTGGATGATAATGGT 59 14288468 14288488 ACCAGGTAGGAGTTAATAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628,FBtr0114625 1 6 6 84 2R 12899045 12899128 GAGCAAATCGGTTCAACGG 59 12898979 12898998 AGTTAATGCGATTCTGCGAC 59 NA Drosophila melanogaster 61 CG1371 FBgn0033482 FBtr0088428 3 1 1 113 2R 5962379 5962398 ACTCTTTGGTAGTCTCAGGA 57 5962135 5962304 TTGGCACTAAAGATTGTCCT 57 NA Drosophila melanogaster 61 Or45a FBgn0033404 FBtr0088503 2 1 1 155 2R 5233866 5233884 GCACAAGCCGTTTATGGTC 59 5234002 5234075 AGTTCTGATGACCCAAAGCA 59 NA Drosophila melanogaster 61 Myd88 FBgn0033402 FBtr0088598 2 1 1 80 2R 5192787 5192806 CACAGAGGAGTTTCTTCGGA 59 5192653 5192746 CGAGTGTGATTCTCAATCTGG 58 NA Drosophila melanogaster 61 CG10631 FBgn0032817 FBtr0081324 3 1 1 88 2L 19754190 19754209 AAATTCAGCGAATTCAGCGA 59 19754063 19754140 AAACTGCTAGTGGTCCTTCC 59 NA Drosophila melanogaster 61 CG14274 FBgn0032023 FBtr0079604 3 1 1 81 2L 8338602 8338622 CTGCGATTCCAGTGATAATCC 59 8338663 8340201 TTTGTCCAAAGTGCATTCCTC 59 NA Drosophila melanogaster 61 CG34016 FBgn0054016 FBtr0100071 1 1 1 108 2L 1099850 1099868 GTCTAATTGCTCACGCCAG 59 1099940 1102161 ACAAATACACTGCGTGCTC 58 NA Drosophila melanogaster 61 CG11454 FBgn0031224 FBtr0078116 2 1 1 60 2L 143405 143423 ATGTATAGTGGTGCGTCGG 59 143442 143465 CGTATCTGTAACCATCTATGTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dbr FBgn0067779 FBtr0078100 2 1 1 99 2L 67933 67951 TTGTTACCGCCAAGTAGAG 57 68011 68093 ATTCTTAGGCAGTGTACTAAGG 57 NA Drosophila melanogaster 61 CG1381 FBgn0033485 FBtr0088425 3 1 1 129 2R 5986888 5986974 TGATAAGAAAGTTTCCCTGACC 58 5986780 5986799 CCTCATGTTCTGAACTTGGA 57 NA Drosophila melanogaster 61 CG32579 FBgn0052579 FBtr0074225 3 1 1 81 X 16217892 16217913 GTCTATGTCCTAAACTATGCGT 57 16217952 16218122 TTTGGTAATATTCGATCTCCGC 58 NA Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 1 2 2 80 3R 25948594 25948612 GGGTCTGGATTATCTGGTG 57 25948473 25948551 ACTACAACTAATGGCTTCGG 57 NA Drosophila melanogaster 61 CG42644 FBgn0261404 FBtr0302341 2 1 1 75 U 16056 16076 GTTAAGTAACACAACGGTCCC 59 16111 16131 CCGATAATGACCCAAGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373,FBtr0082887,FBtr0273374,FBtr0082886,FBtr0082885 3 5 5 99 3R 9906623 9906731 CACAATGCAAGAGATGGTCTC 59 9906792 9906810 TGTACGTGTTCAGGGAGTC 59 NA Drosophila melanogaster 61 CG11583 FBgn0035524 FBtr0073242 2 1 1 126 3L 4282619 4282637 ATCGTCAGATGATGTGGTG 57 4282450 4282471 CGGCATTAGGGTCTTAATATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18259 FBgn0030956 FBtr0074661 3 1 1 80 X 18677382 18677400 CGATTTGAGTCTGGACGAG 58 18677258 18677339 TTCGCATTGAACTTTCTGTC 57 NA Nonspecific Drosophila melanogaster 61 CG2233 FBgn0029990 FBtr0071123 2 1 1 87 X 7930188 7930266 ACAACTCGCCCTTCTATCG 59 7930119 7930138 GAGAAGAGGGTGTTCCTCAG 59 NA Drosophila melanogaster 61 CG5276 FBgn0037900 FBtr0082390 3 1 1 98 3R 7258581 7258599 GCTACATGATCCACGAGAG 57 7258658 7258733 CCTTGGTTTCGTTGTATTTCTC 58 NA Drosophila melanogaster 61 CG11459 FBgn0037396 FBtr0078623 2 1 1 60 3R 1852645 1852665 TCCTCTTCAATTATCGCTCGT 59 1852605 1852625 GTAAGTGCATTGGTACTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 3 2 2 82 3R 1651095 1651114 CTGAAGATGCTCATTCGCAG 59 1651159 1651231 GTAGCGATTCATGCGATCC 59 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 2 2 2 68 3L 21807940 21809379 CATGTGAAGGCTGCAAGTC 59 21809411 21809429 GCTTACATCCTGCAATCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5835 FBgn0038682 FBtr0083751 3 1 1 174 3R 14979140 14979158 CTTCAACAGTGCGCTTCTG 59 14975346 14977221 GGAAGTATCCTCCACGACAG 59 NA Drosophila melanogaster 61 CG15027 FBgn0030611 FBtr0073965 2 1 1 60 X 14979286 14979305 ACCTGAAACTCGACCTAGTC 58 14979245 14979265 TTCTTAGACTGCTCCTTCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kl-5 FBgn0001315 FBtr0113891 1 1 1 80 YHet 30450 30525 CTTATGATTGACCCTCAACTTCAG 59 30560 30582 CGAAAGTCTAAGTACTACCAACC 58 NA Drosophila melanogaster 61 snoRNA:M FBgn0044508 FBtr0070292 3 1 1 70 X 1376592 1376610 CAACTTCACTGCTGACCAG 58 1376540 1376561 TGGTGTATCTATCAGAGACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:M FBgn0044508 FBtr0070292 1 1 1 69 X 1376592 1376610 CAACTTCACTGCTGACCAG 58 1376541 1376562 GGTGTATCTATCAGAGACTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 1 1 1 217 X 373091 373153 AGACCCTCTTCATCTTTCGT 58 372893 372914 CGAATTGTACTCTTCTTACAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CR32661 FBgn0030356 FBtr0073593 1 1 1 88 X 11812517 11812635 AGCGACGGAAATCTATTTGTG 59 11812449 11812467 TTCGATTGACATGCATGGC 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 3 5 5 102 X 21868783 21868863 AGATACTCCACGAATTTGCCA 59 21868927 21868945 CGATGTTTGGTCGAGAACG 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 3 1 7 178 X 18007406 18007489 GAAACTCAGGTTGCTGCTG 59 18006027 18006049 TCAGTATCTTACTGTGGTAGTCC 58 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 2 2 2 107 X 17521043 17521061 AAGAAGTCCCTGGTCATCG 59 17519673 17520973 CAAGTGTTGTTTCTCCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 1 1 1 124 X 16506616 16506634 GTGATGGAGTACCTCGAGG 59 16506722 16507572 CCCTGTGAGTGCAAATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 3 4 4 81 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 1 4 4 80 X 15896969 15896988 CCAAATACGGTGTTTCCCTG 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 2 2 2 195 X 15837144 15837163 ATCTAAGGCCACCTCTACGA 59 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0112985 3 1 2 152 X 15075224 15075242 ATATGACAGTGGGTCTGGA 57 15075355 15075453 TTAAAGAATCCGTCGTAGTCAG 58 NA Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073969,FBtr0073968 2 2 2 60 X 14959720 14959738 AACCACTGGTCTATGGTGC 59 14959678 14959696 TGAACACCTGGATGAGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5334 FBgn0030577 FBtr0073935 1 1 1 60 X 14669952 14669973 CTTCTACAATCACCGTTCTCTG 58 14669994 14670012 ATCCTCCATTGAATGCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NetA FBgn0015773 FBtr0073942 3 1 1 81 X 14498822 14498841 TATGACCTGGATCATACCGA 57 14498642 14498781 ACCCAAGATCAAATAGGATCTG 57 NA Drosophila melanogaster 61 CG1461 FBgn0030558 FBtr0073908 1 1 1 106 X 14155869 14155888 CAAGCTATCCCTTAACACGC 59 14155957 14157491 TGGGATCACCAATGGACAG 59 NA Drosophila melanogaster 61 CG12715 FBgn0030443 FBtr0073750 3 1 1 71 X 12949185 12949204 CTATATCACAGCCAGCATCC 58 12948758 12948776 TATCGATTCCTGGATGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073684,FBtr0073683 2 2 2 127 X 12572081 12572378 CACATCCAGATACAAGACCGA 59 12572467 12572485 TGTACTTGGGATGACGGTG 59 NA Drosophila melanogaster 61 CG32652 FBgn0052652 FBtr0073671 2 1 1 89 X 12305612 12305687 AGCTAGGATAGTTGAAATGGTG 58 12305544 12305563 AAGCGCAACATTTGTATCCA 58 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073406 1 1 3 85 X 10769332 10769350 GAGTTTATGCGGCAGATCG 59 10769195 10769285 GAGAAGTTGAACTTCTCCTCG 58 NA Drosophila melanogaster 61 CG2124 FBgn0030217 FBtr0071491 3 1 1 131 X 10491960 10491978 CTGGTCACAGTGGTTATCG 58 10492073 10492357 CCAATAGATCACCAGTGGC 58 NA Drosophila melanogaster 61 CG12640 FBgn0030202 FBtr0071464 2 1 1 100 X 10326590 10326608 TTGGAGGTGACTTCTGCTG 59 10326508 10326526 GGATCATGAAACTCCTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32698 FBgn0052698 FBtr0071386 3 1 1 84 X 9730764 9730782 GATCCACATGCACTACGGA 59 9730830 9739742 TATTTGTATCTCCGCCGGG 59 NA Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071262 3 1 2 103 X 8873858 8942458 GAGAAGGAATGGTGTGCAC 58 8873773 8873793 AAGTTGACGGAATTAGCACTG 59 NA InUTR Drosophila melanogaster 61 CG3160 FBgn0029789 FBtr0070847 3 1 1 80 X 5581342 5581361 TATAACACCACGCTCAATCC 57 5581213 5581301 GGAGTACTCATAGCTGATTCG 57 NA Drosophila melanogaster 61 b6 FBgn0024897 FBtr0070272 2 1 1 108 X 1582600 1582695 ATGTACAGATTGAACTACCCGT 59 1582764 1582782 CAATGCGTTCTGCCTTCAG 59 NA Drosophila melanogaster 61 mei-38 FBgn0260986 FBtr0070258 1 1 1 78 X 1371276 1371294 ATCAACGTGGGTGACTACC 59 1371423 1371441 TGAGGCTCCTGTTGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070169 3 1 3 127 X 830260 830278 AGGCTACTACAGATGCTCC 58 830438 830456 GATCACAAACTCGTGGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17778 FBgn0023534 FBtr0070080 1 1 1 202 X 389051 389069 TACTGTCATGCCAAGAGGC 59 389586 389604 CCTCCATCTCGTCCATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41583 FBgn0085805 FBtr0114259 1 1 1 62 U 6961726 6961744 ATTAGCCAACGTATGCCCA 59 6961682 6961700 ATTACTATGCACGCGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42431 FBgn0259862 FBtr0300159 3 1 1 225 U 8491751 8491770 TCAACGGTGAAGATCTACTG 57 8491958 8491976 TTCTGGTGTAACCGAAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42428 FBgn0259859 FBtr0300156 1 1 1 151 U 7863497 7863515 GATACACAGCCATGTTCGG 58 7863628 7863648 CATAGGGACTCCAAGTTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SteXh:CG42398 FBgn0259817 FBtr0300105 1 1 1 110 U 6622022 6622040 TCTGATACACAGCTGGACG 59 6622114 6622192 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG40551 FBgn0085496 FBtr0302523 3 1 1 81 U 2792370 2792394 GATATACCTATCTCTGTACAAGCTG 58 2792431 2792511 GGGAAATAAATACACTGCCGT 58 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220,FBtr0089221 3 2 2 60 4 1050927 1050948 CCAATTACCGAAGATGATTTCC 57 1050888 1050908 AGCTTCCAAGAATTTCTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816,FBtr0085815 1 2 2 84 3R 27440094 27440113 CTATTATCTGGATCGCGAGG 57 27440159 27440234 GTCAAACACCTTTATGCACG 58 NA Drosophila melanogaster 61 stg FBgn0003525 FBtr0085397 1 1 1 67 3R 25080625 25080644 TGGGAAACTATTGTGGAGGA 58 25079666 25080597 GAACTGCTGGTGTTATTACTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 2 5 5 124 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102110 23102128 GATTTCTTCAGCACTCCGT 57 NA Drosophila melanogaster 61 CG31075 FBgn0051075 FBtr0085080 1 1 1 81 3R 22812874 22812965 GGGAGATAAGGCTGATATCGA 58 22812813 22812831 ACTCAATTTGCGCCATTCC 59 NA Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 3 1 1 77 3R 22460649 22460723 GTGTTTCTTACGTTGTTGGC 58 22460763 22460781 CACAGGTCCTCCATAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558,FBtr0112559 2 2 2 80 3R 20889822 20889904 CAGACCAGAGTATACAGATTCC 57 20889944 20889963 TTAAGGAAATCCTTGGCCTG 57 NA Drosophila melanogaster 61 CG34290 FBgn0085319 FBtr0299531 2 1 1 80 3R 20114903 20115035 CGAGTATATTTACTTCCAACCATCC 59 20114847 20114867 AAATCACTCCAGTAACGACGT 59 NA Drosophila melanogaster 61 Hsp68 FBgn0001230 FBtr0084589 3 1 1 60 3R 19881501 19881521 GTGACCATTCAAGTGTTTGAG 57 19881461 19881480 TGCCCAATACATTGTTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0301165 2 1 3 187 3R 19812924 19813002 CAGTAGCAGACGATTAGAGG 57 19813152 19813170 GTTGTAGTGGGAGTTGGAC 57 NA InUTR Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 3 1 1 93 3R 16876550 16876629 AAGTTTGGGACAGTTGCCT 59 16876475 16876493 ATACAAGCGCAGAATCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808,FBtr0301700 3 3 3 89 3R 15873697 15873781 ATCTTCTCGGAAATGGCCC 59 15873834 15873852 CAGATGGAAAGCCAAGCTG 59 NA Nonspecific Drosophila melanogaster 61 CG31229 FBgn0051229 FBtr0083663 3 1 1 101 3R 14494459 14494477 TCCTACGCGAAGAATTTCG 58 14494611 14494629 GTAGGTGCCATTCTTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14303 FBgn0038633 FBtr0083659 3 1 1 81 3R 14472102 14472229 TTCCCGACGGTTATGTTCTC 59 14472270 14472291 GGGAGGACAAATAATTGATCCC 59 NA Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083398 3 1 2 195 3R 12908195 12908219 GTGATTACATTCCCATACTGAACAG 60 12908528 12908546 CCAGAAGATTGCTGCAAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gr89a FBgn0038440 FBtr0089695 2 1 1 97 3R 12323822 12323842 GGTGAGGTCTGCTAAATTGAG 58 12323691 12323709 CAGGAAATGGAGTCGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083326 3 1 2 83 3R 12172996 12173107 ACATCTTCGACGAGTCCTC 58 12172931 12172949 AATCCCTACCCTGGTACAC 58 NA Drosophila melanogaster 61 CG5013 FBgn0038396 FBtr0083223 3 1 1 190 3R 11875629 11875699 AATACCTGAGCTGCTTCAGG 59 11875850 11875870 TGCAGTTGTCAGTAAGTACCA 59 NA Drosophila melanogaster 61 mRpL9 FBgn0038319 FBtr0083084 2 1 1 89 3R 11156484 11156502 GAACATCTACGTAACGCCG 58 11156612 11156630 TATTTGCGCTTCAGGACGA 59 NA DesignNoJunction Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083134 1 1 2 107 3R 11055043 11055061 TTTGTGATCTTCGTCGTGC 58 11054890 11054972 CTGTGGTGTTGTCGTTGAC 59 NA InUTR Drosophila melanogaster 61 Rrp6 FBgn0038269 FBtr0113235 1 1 1 95 3R 10711476 10711569 GGCATTCACAAACAAAGGGT 59 10711400 10711418 TAGCTTAGGTAAAGGGCGC 59 NA Drosophila melanogaster 61 CG7091 FBgn0038099 FBtr0300278 2 1 1 92 3R 8805120 8805139 AGCAACATCCAAGGATATCG 57 8805194 8805270 GAATGGTTACCACTGGCTG 58 NA Drosophila melanogaster 61 CG5538 FBgn0038052 FBtr0082631 2 1 1 90 3R 8273750 8273769 AATCCTGGTAGACCACATCG 59 8273888 8273906 TCTTGCTGACCGATTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 2 2 3 92 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115990 8116009 TCTATGGGACAGTTTCTGCT 58 NA Drosophila melanogaster 61 CG42505 FBgn0260231 FBtr0300638 2 1 1 60 3R 7857175 7857195 TAGCCTACGAATTCCATCGAC 59 7857079 7857156 CCTAAGCAACTCCTAATACGAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082535,FBtr0082534 2 2 2 80 3R 7581388 7581471 CAGTTATTGACACCAGTTGGC 59 7581328 7581347 GTAATAGTGTGCCTCACCCA 59 NA Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 1 2 2 131 3R 7409666 7409686 GCCTACTCGATATACAATCCC 57 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 Irp-1B FBgn0024957 FBtr0082259 1 1 1 81 3R 6237505 6238350 GTAAATATGATCAACTGCCCTACTC 59 6237448 6237469 TCTAGGATATGGAAGTTGTCGC 59 NA Drosophila melanogaster 61 CG8165 FBgn0037703 FBtr0082063 2 1 1 132 3R 5341846 5341864 CAGAAGTTTGGCTCAAGCC 59 5344051 5344071 GAATGAGGTCGAGGATATGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33191 FBgn0053191 FBtr0081941 1 1 1 60 3R 4604350 4604368 CAATGTCAAGGTTTGCCGA 59 4604308 4604326 CCGATCCTCGAACTTAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8159 FBgn0037619 FBtr0301194 3 1 1 92 3R 4553685 4553762 CCTGTTCAGATGTGAGCTG 58 4553816 4553836 TCCAAGTTGTGCTTATGAGTG 58 NA Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 1 1 1 76 3R 4169504 4169577 AACTGTTTCTCTTTGCGCC 59 4169617 4169635 CGAAATTCACGAATGGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG18749 FBgn0042182 FBtr0100545 1 1 1 80 3R 4072981 4073000 TTCGCTGATTAATTACGGCT 57 4073043 4073118 TTAAGCCTGGTCGTATTCG 57 NA Nonspecific Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 2 2 2 81 3R 3612901 3612982 ATAACTCTGTTTCACAGGTTCC 58 3612841 3612859 GTTAGAGGATCCGATCGGA 58 NA Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081581,FBtr0081580 3 2 2 254 3R 3112027 3112045 CTTATCCACGGACGGACTC 59 3112397 3112417 TAATCGCTGAGACATCCTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 alphaTub84B FBgn0003884 FBtr0081639 2 1 1 120 3R 2912464 2912974 ATGCGTGAATGTATCTCTATCC 58 2913055 2913073 TCTTGTCAGACGGCATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sunz FBgn0037462 FBtr0081681 1 1 1 110 3R 2456312 2456388 GCATTTGAGGTTTATACAAGCG 58 2456459 2456477 CAATTCGTTGACCTCGTCG 59 NA Drosophila melanogaster 61 CG34287 FBgn0085316 FBtr0112483 3 1 1 60 3R 1679391 1679412 TGTAACGAAAGGATCTACAAGC 58 1679431 1679451 TCAGAATTCGGAAATCCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9855 FBgn0037242 FBtr0078950 1 1 1 121 3R 222518 222593 TTATCCGAACCTCAGCCAG 59 222415 222433 ATATGGTGGGCAGCAAGAG 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078952,FBtr0111207,FBtr0078953 3 4 4 89 3R 161661 161742 TGTTTGACTCGCATGTTGC 59 161590 161611 CTGTTGGTGTTAGACTATTGCA 58 NA Drosophila melanogaster 61 CG11137 FBgn0037199 FBtr0078577 3 1 1 88 3L 22861068 22861086 TGAACCAGAGTGAAGTGGT 58 22860946 22861019 CATGGGAATGTTCTTAAGAGGT 58 NA Drosophila melanogaster 61 CG11226 FBgn0037195 FBtr0078546 2 1 1 60 3L 22830521 22830541 CGACTACGTCTATGAGGTCAG 59 22830562 22830581 GTCCAGAAGAATTTCTCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7202 FBgn0037086 FBtr0078393 3 1 1 101 3L 21485279 21485688 AATTATACACAGAGCGTCCTG 58 21485198 21485216 CAAACTGGTAGGTGCTGTC 58 NA Drosophila melanogaster 61 Acp76A FBgn0015586 FBtr0075038 3 1 1 193 3L 19044296 19044317 CAAGGATGTTCACTTGCTACTG 59 19044055 19044147 CAACTACTTCTAAACGGAGAATGG 59 NA Drosophila melanogaster 61 skl FBgn0036786 FBtr0075119 1 1 1 89 3L 18432688 18432706 CATCACCATGTGCAAGGTC 59 18432617 18432635 TGTATTTGAACGGTGGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9692 FBgn0036654 FBtr0075317 2 1 1 63 3L 16698118 16698136 TGAAATCCCAGTACACCCG 59 16698226 16698244 GGCTCTAGTGCTGTAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0301473,FBtr0112851,FBtr0301472 2 5 7 80 3L 16063961 16063980 ACAGACGGTTATTCAGAGGC 59 16064020 16064219 GGATCCAGTTCATCCATATCGA 59 NA Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 3 2 2 102 3L 16029308 16029326 GGTCAGGGATTACCTGGTG 59 16029389 16029470 GGTGTTCATGTTCTTGTATCCA 58 NA Drosophila melanogaster 61 CG6498 FBgn0036511 FBtr0075562 3 1 1 131 3L 15563027 15563119 ATTTATCGTCTCAGTGCTCGA 59 15563212 15563230 AATGCTGTTTGAGGTGCTC 58 NA Drosophila melanogaster 61 CG7272 FBgn0036501 FBtr0075548 3 1 1 75 3L 15496328 15496411 AATACTGTGATGGTGCTGC 58 15496446 15496468 GATAAATAGCGAACATGGAGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6859 FBgn0036484 FBtr0075640 2 1 1 220 3L 15137559 15137577 TAGATCCGATCCAAAGGCC 59 15137894 15137912 GTGACAAGAAGTCCTGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 1 2 2 194 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113865 15113883 GAACTCATTGGGTCCACAG 58 NA Drosophila melanogaster 61 CG32113 FBgn0052113 FBtr0273390 2 1 1 80 3L 12749180 12749512 ATAGACATATCTAAGGTCCAGCG 59 12749547 12749570 GTATTGTCGAACTTCCTTAACCTG 59 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 2 3 3 80 3L 12737069 12737148 TTTACAACTGGTGTCATGAGC 58 12737189 12737208 TTCTCTGTACTGTCCATCCG 59 NA Drosophila melanogaster 61 Lsp2 FBgn0002565 FBtr0089324 3 1 1 60 3L 12123699 12123717 TCATGCACTACGACACCTC 59 12123738 12123759 ACAATGGTCTTGTATACCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 2 2 2 103 3L 11143173 11143248 GAAATGTGTTGTGGCAAGAC 58 11143089 11143107 TTGTTGGAGGACAAAGGTG 57 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 3 3 3 109 3L 9581444 9581463 TATATCCTCATCGGAGCTGC 59 9581535 9584349 CCAAGTGCTCTTTCTTGGG 58 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 2 3 3 98 3L 9503745 9504167 GTCTGTTCCAGGGTAATGC 58 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 3 2 2 94 3L 6173208 6173291 GTGAGTGCAAGGTTTGTGG 59 6173132 6173151 CTCAATAGCACGAAGCACAC 59 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370,FBtr0073359 2 2 2 80 3L 4807941 4807962 AAGAACAATGAATTGCTCCTGG 59 4807823 4807905 CGAGGAAATCTTTATCCACTTGAG 59 NA Drosophila melanogaster 61 CG7465 FBgn0035551 FBtr0073306 2 1 1 257 3L 4480324 4480425 GGACAATATGAAACTCTTCCTGG 59 4480642 4480660 TTGAAGAGCTCGTTGACGT 60 NA DesignRelaxed, InUTR Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 3 3 3 103 3L 4369894 4369913 CGGTATACACCTTCATGTGG 58 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 1 3 3 101 3L 4369887 4369911 GTATACACCTTCATGTGGATATCAG 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 1 2 2 121 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191879 4192202 TGCTCAAGTTTCCTTGCAC 59 NA Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 1 2 2 80 3L 2662875 2662894 CTGATTGGGATACGATGTGC 58 2662937 2663011 CATAGGTCAGGTGGCACTC 59 NA Drosophila melanogaster 61 Bgb FBgn0013753 FBtr0072758 1 1 1 60 3L 1640321 1640339 GTGCGACTTTGACAAGGAG 59 1640361 1640381 CCCGTTCATGATAAAGTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 312 FBgn0029514 FBtr0072680 1 1 1 80 3L 1351461 1351538 CAATTTAAAGCGAGGTGTTCG 58 1351580 1351598 ATGTCGTCCACATTCTCCT 58 NA Drosophila melanogaster 61 CG34454 FBgn0085483 FBtr0112760 2 1 1 89 3L 232021 232039 ATACAATCCCATTTGCGGC 59 231883 231970 ATTTGAATGTCAGCTCCACAG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 3 3 3 99 2R 20963061 20963135 AACAATCGCGCAATCTCTG 59 20962980 20962998 CAGTCGCTATCCAAGTCCT 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072435,FBtr0072434 1 3 3 80 2R 20656992 20657010 AGGAGGAGTTGTCAGAAGG 58 20656872 20656948 ATCCAATCTCATCACCCGA 58 NA Drosophila melanogaster 61 Pros28.1B FBgn0017556 FBtr0072350 2 1 1 80 2R 20389122 20389322 ATAACCCGATACATAGCCCAG 59 20389062 20389080 AACCAGACAGGACAATCCA 58 NA Drosophila melanogaster 61 Thiolase FBgn0025352 FBtr0072226 3 1 1 133 2R 19755726 19755993 CCAGGAAAGTTCAATGCCG 59 19755611 19755629 CTTGGAGTAGGTGGTTCCG 59 NA Nonspecific Drosophila melanogaster 61 CG4585 FBgn0025335 FBtr0072227 3 1 1 110 2R 19752636 19752655 TTTCAATGATTCAGCAAGGC 57 19751842 19751860 CTTGCTGATCTGCGAACTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13542 FBgn0034809 FBtr0071987 1 1 1 88 2R 18897216 18897234 GTCCATCAATCGGAGGAGG 59 18896795 18897164 AAACGGCATTCGAATGTGG 59 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 1 2 2 80 2R 18703125 18703200 ACCATCACATTCAGATATCTCC 57 18703241 18703259 TTGCTACTCAGTTCGTCTG 57 NA Drosophila melanogaster 61 CG30279 FBgn0050279 FBtr0071768 2 1 1 68 2R 18066723 18066741 AGGAGCATAATGACTCGGC 59 18066773 18066791 TGATAGTCTGAGGCACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15084 FBgn0034402 FBtr0086619 2 1 1 60 2R 14739223 14739242 CACATTTGGTGGACTCAAGC 59 14739263 14739283 AAGATCCTGTACTTGGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 edl FBgn0023214 FBtr0086652 2 1 1 117 2R 14555884 14560459 TCGATCAAGAACTCAAACGT 57 14555786 14555804 AATCTTGGCCACCATTCAC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10912 FBgn0034296 FBtr0086807 1 1 1 98 2R 13944224 13944243 AATTCCACCTTCGAATCCTG 58 13944053 13944163 ATATGTCGGACCCTCAGTG 58 NA Drosophila melanogaster 61 CG14488 FBgn0034278 FBtr0089558 2 1 1 84 2R 13655157 13655175 CTAACGGAATCTCAAGCGA 57 13655038 13655057 ATAGAAACTGTTCCATGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG30096 FBgn0050096 FBtr0289994 3 1 1 102 2R 12209405 12209496 ACGACAGGAATATACGAATTCC 58 12209270 12209289 TCCAATGGTGTACCAAATGG 58 NA InUTR Drosophila melanogaster 61 CG7639 FBgn0033989 FBtr0087424 3 1 1 86 2R 10876367 10876447 CGGCCTGAAATGTCTTTCAG 59 10876300 10876321 CACCAAATAGCCTATGTTGGTG 59 NA Drosophila melanogaster 61 Cpr51A FBgn0033942 FBtr0087514 1 1 1 110 2R 10402608 10402626 AATTCGTGTTGATCGCCAG 58 10400514 10400538 CATTCTGATATTTCTCGTACTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18568 FBgn0033888 FBtr0087608 2 1 1 60 2R 9859850 9859871 ACATGAGAAGTCCAGATTAGTG 57 9859811 9859829 CTTCCTGACTTCCGTTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 2 2 2 64 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108846 9108865 CGGATACTGTGGGATAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112741,FBtr0112740 1 2 2 88 2R 9046340 9046528 ATGATCGGCAATGCTTTCC 59 9046580 9046598 TAGGGATTGTCGGTCAGTC 58 NA Nonspecific Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 3 1 1 60 2R 8293621 8293700 CATTATGAGCTCAAAGATGGCT 59 8293719 8293739 CATTCACGGACTTCAAGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071,FBtr0113072 2 2 2 80 2R 7771345 7771364 TTAGTGTTCCCGGATTTCGT 59 7771227 7771304 CTGATTTGTTTGTACGCACTG 58 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074,FBtr0088073 2 2 2 91 2R 7561254 7561272 TCTCTGCACGATCATTGTG 58 7561325 7561404 ATAGAAGAATCTTTCTGCCCG 58 NA Drosophila melanogaster 61 Fpps FBgn0025373 FBtr0088170 1 1 1 80 2R 7194460 7194781 TGAAGAAGACTAGCAGAACCT 58 7194400 7194418 CATCTTTCGACACCGTGAC 59 NA Drosophila melanogaster 61 CG13227 FBgn0033589 FBtr0088107 1 1 1 60 2R 7122892 7122912 AGAAACCAAGCTCTATTCAGC 58 7122934 7122952 TCTGTGGAATCAGACTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1675 FBgn0033457 FBtr0088375 3 1 1 60 2R 5753872 5753891 ACAGTGGAAGATAGGAACGA 58 5753913 5753932 GGAAGTGTTCATAGCTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 3 3 3 117 2R 5150100 5150177 ACAGGATGTCGACAAGACAG 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 3 2 2 110 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957127 4961591 AAAGATATCGTTGAGTCGCTG 58 NA Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 2 2 2 98 2R 3860604 3860624 TATCTGGAGGACAACGATTCG 59 3860681 3860761 ATATAGAACCTGCAACTCCTCG 59 NA Drosophila melanogaster 61 phr FBgn0003082 FBtr0088838 1 1 2 172 2R 3713043 3713116 TCAAGATTGTTCTTCCGCTG 58 3713250 3713269 GTAATCCGGCTTAGAAACCA 57 NA Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 3 1 1 261 2R 2703832 2703852 GGTGCTAGCTATTTACGATGC 59 2704075 2704147 GTACACCAACGAGTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 3 2 2 135 2R 1907047 1907121 TGCCAAAGAAGGAGAACAC 58 1907220 1907238 GGTATCCTCCAGTCTAGCC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-525e FBgn0083034 FBtr0113546 1 1 1 60 2L 20419490 20419509 TTTGTGTCTCAAATGCTCCA 58 20419529 20419550 GCATAATTATTCAGGATGCCGT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33879 FBgn0053879 FBtr0091883 1 1 1 60 2L 21509569 21509587 GAACGTAATTCGTGATGCC 57 21509527 21509545 GGCTGTAACTGTCTTCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 2 2 3 82 2L 21318352 21318370 TCGATGCTTACAAACAGGC 58 21318415 21318499 AGGAGTATAGCATTGCACCT 58 NA Drosophila melanogaster 61 Arc-p34 FBgn0032859 FBtr0081358 3 1 1 80 2L 20422227 20422313 CCACATTAAGTGTTCAAAGGCT 59 20422353 20422372 GCACGATTTAGCACCTTGAG 59 NA Drosophila melanogaster 61 gammaTub37C FBgn0010097 FBtr0081228 3 1 1 91 2L 19185395 19185413 CAACCATTACATACCGCGG 59 19185214 19185342 GGTTGTACAACTTGGAGTACG 59 NA Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 1 1 1 60 2L 18956464 18956484 TTAGTACTGGACAACTTTCCG 57 18956318 18956442 TTTCATCCATGCACTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31790 FBgn0051790 FBtr0081076 3 1 1 92 2L 18667670 18667689 AACTTAATGCCCTGAAGGAG 57 18667537 18667617 CGCGCATAGAATTTATTAGCG 58 NA Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 2 2 2 80 2L 17158736 17161864 GGAGTCAACATCGATCTGC 58 17161906 17161926 ATAAAGTCCGGAACTCTGGAG 59 NA Drosophila melanogaster 61 Cas FBgn0022213 FBtr0080930 2 1 1 92 2L 16822638 16822724 CGTAATGAAAGCCATTATGCGA 59 16822567 16822585 AGAATCTCGGTAAGCCGTG 59 NA Drosophila melanogaster 61 Ugt36Bb FBgn0040261 FBtr0080910 3 1 1 169 2L 16797191 16797209 AAAGACCATGGACTTTGGC 58 16797401 16797419 ACAACAAGGAAACTCGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080777,FBtr0080775 3 5 5 86 2L 15729490 15729575 CATTTAGTCGGGAGATGGCT 59 15729423 15729441 GGAAGAATGGCTCCATCCA 59 NA Drosophila melanogaster 61 CG10859 FBgn0032520 FBtr0080522 2 1 1 154 2L 13397000 13397018 ATACAAGTACGCCGTTACC 57 13396800 13396885 GTTCAAACATCGACATCATGAG 58 NA Drosophila melanogaster 61 betaCop FBgn0025724 FBtr0080469 2 1 1 80 2L 13380056 13380074 TGTCTATGGACGTTGTGGG 59 13380112 13380198 CAGCAATAGTCTTTAGATTGACCTG 60 NA Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271 1 1 2 147 2L 11586619 11586699 AGATAATCAAGAGCAACCTCCT 59 11586493 11586512 CGAGTCCAACAACTGTTCAG 59 NA InUTR Drosophila melanogaster 61 CG6737 FBgn0032294 FBtr0080120 3 1 1 119 2L 10737035 10737247 ATCTTTCGAAGGCTAGTCAG 57 10736935 10736956 GGCAGATAGTAATCCATTTCCA 58 NA InUTR Drosophila melanogaster 61 CG14537 FBgn0031954 FBtr0079526 3 1 1 61 2L 7840892 7840911 GAAAGATCGGCGAGATTGTG 59 7840935 7840953 TATTGCCCAGAACCGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 3 2 2 83 2L 7712057 7712075 TCTTCAAGAAGGTGCCCTG 59 7712121 7712195 TTTGCTTTCCCATGTCAGAC 58 NA Drosophila melanogaster 61 Cyp4d21 FBgn0031925 FBtr0079471 1 1 1 88 2L 7606646 7606664 TACTGACAAGGTCATTCGC 57 7606715 7606794 CATCGTCTCCCATTATCAGC 58 NA Drosophila melanogaster 61 CG4497 FBgn0031895 FBtr0079418 2 1 1 84 2L 7192046 7192506 GATATTCACGGAAAGTCGCG 59 7191981 7191999 GTCAAAGGTTCCGGAATCG 58 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378,FBtr0079377,FBtr0079376 1 3 3 104 2L 6801780 6801798 TGTGAGCGTAGAGGTAGGA 59 6801639 6801712 CTTATAAGCCACACGCGAC 59 NA Drosophila melanogaster 61 CG9548 FBgn0031822 FBtr0079264 3 1 1 85 2L 6490335 6490355 ATTGTAAATCTAGGCAGCTCC 57 6490205 6490292 CGGAGAGCAGATTAATAGTTCTG 58 NA InUTR Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 1 2 5 100 2L 2452406 2455066 AAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 2 2 2 91 2L 952064 952082 CAAGGAGACGGCTATTACG 57 952137 952268 ATCGTAGACGTTGCTTGTC 58 NA Drosophila melanogaster 61 CG3862 FBgn0031286 FBtr0078038 1 1 1 60 2L 825376 825397 ACCTTGACGTGATCATTTATCC 58 825337 825357 TCTGTTTCTCCCTGAACTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4133 FBgn0031257 FBtr0078061 1 1 1 80 2L 456457 456545 ATCATCAATGAGGCGGAGG 59 456587 456607 GTCCTCCGTTTCAAATACCTC 58 NA Drosophila melanogaster 61 CG31920 FBgn0051920 FBtr0078097 3 1 1 80 2L 328640 328658 GGGATCCCAAAGATCCACC 59 326047 328598 AGCAACCACAAACTTCATCTC 59 NA Drosophila melanogaster 61 CG11601 FBgn0031244 FBtr0078137 1 1 1 81 2L 282701 282719 TTGGGTCATCTACGTGTGG 59 282490 282656 CACGTGATTCAACCAGCTG 59 NA Drosophila melanogaster 61 CG3709 FBgn0031227 FBtr0078147 3 1 1 87 2L 155138 155162 CGGAGTATAGAAACATCAATGAGAC 59 155007 155028 TCGGATATAACAAGCTCTTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11377 FBgn0031217 FBtr0078104 2 1 1 104 2L 103343 103361 TGATCGATCTTGCGATGGA 59 103427 103528 TCCGCAGAAATATCATGACAC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 3 2 2 80 2L 139951 140129 ATAATGTTTCGTTACGGGCC 58 139890 139908 CACTGAATCGTACTGTGCC 58 NA Nonspecific Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078 1 1 2 110 2L 557662 557736 TAGCCATCATAACAGGCGA 58 557570 557588 TCATAGATGAGCCTGGCTG 59 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568 3 1 2 122 2L 594375 594793 GAGCAGATACTTCTTCAAGATTCTC 59 594277 594296 ATCTTGAACTTGGCCTTCGA 59 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 2 3 3 84 2L 862618 862637 ATTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 2 4 4 86 2L 1085133 1085215 CCCAACTCATCAATGGTGC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 3 6 6 127 2L 1500033 1500122 CCACTCAAGTCAACATATCCAG 58 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 1 1 1 119 2L 1755474 1755494 CACGACGATGAAGAGTTAGAG 58 1755313 1755333 CATTTGAAAGCCCATGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 1 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938580 TTGATCCATCCAAGTTGGC 58 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 1 3 3 80 2L 2040348 2040429 TTCACAGTGCTGATTACACC 58 2040472 2040490 AAGCATGGCATCTTTACGG 58 NA Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 2 2 2 141 2L 2263744 2263822 GAATGGGCCAATCATCTCC 58 2263925 2263945 AGCTATTGATTTCCCGATACC 57 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 1 4 4 80 2L 2495423 2495442 TGATAACGCTGGAGTTTCAG 58 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0077702 2 1 2 80 2L 2671788 2671866 AACAAAGCTATAATCTAGGCCG 58 2671905 2671925 CATTGTATAGTTTGCTGCCCT 58 NA Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 1 2 2 97 2L 2753625 2753643 AAGGAATCCGTGAAAGGCA 59 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077726 1 1 4 80 2L 2793376 2793394 TGGAAAGGGTAAGAAGGGT 57 2793257 2793334 ATATCAGGCTGAACTTTCTCC 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 2 4 11 180 2L 3626210 3634252 TTATGTCATGGAAGATGGACG 58 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 2 4 11 87 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994955 4994973 CCGGATTTCTTCACATCGC 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707 3 1 5 92 2L 5155840 5187618 CGAGCAACAGGATCTAATTACG 59 5187671 5187689 CTGCTCTGGTTCATGTTGG 58 NA Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 3 3 3 84 2L 5539760 5539781 TACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 1 3 3 82 2L 5539759 5539779 CTTAACGAAGTACAGGATCGT 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300038,FBtr0079249 2 2 3 195 2L 6329689 6330133 TGACTTCCGGTTCCATATCG 59 6330291 6330309 CAGGGACTGTTCAAGTTGC 59 NA Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 3 3 3 102 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616143 6616223 GCTCGTATTCCTCAAACAGC 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 1 5 5 81 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 2 5 5 80 2L 6961942 6961960 AATGGAATCGATTCAGCCG 58 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 3 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688026 7688046 CTTAACAACAGCTTTGAGCAG 58 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 2 2 2 80 2L 7712224 7712309 CGATGAATTCTTCCACTTGGA 58 7712348 7712369 GTTAATTGTTCCCATACCATGC 58 NA Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 3 2 2 87 2L 8712295 8712397 TTTCGCAGCAAGAATACCT 57 8712226 8712244 TTATCCAATACGGGCAGAC 57 NA Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 2 2 2 61 2L 8940186 8940262 CTGACTGGGCCTACTATCTG 59 8940144 8940162 GATAATGTGATGCGCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 1 3 9 81 2L 9905922 9905940 ACGTACCTGGCAATCAGAC 59 9905068 9905880 AGACTGTAGTTTAGCTTGGGAG 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 2 1 1 150 2L 10426576 10426597 CACTCGATTTATTCTTCATGCC 58 10426078 10426096 ACCCGATAATTCAGGTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 1 3 3 80 2L 10774660 10774754 TACGACAATTGTCCAATTCTCG 59 10774601 10774619 TTTCGCCGTGGTAGTAGTC 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 1 5 5 80 2L 10993660 10993748 AAGACCGGAATGAGTATGTG 57 10993790 10993809 CATCCTCGGCTATGATAAGG 57 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 2 2 2 127 2L 11991263 11991341 CAAATATAGCTCCCATGTCCG 58 11991428 11991448 CATAAATGGAAACCCGATCCT 58 NA Drosophila melanogaster 61 CG18787 FBgn0042125 FBtr0080314 2 1 1 60 2L 11998770 11998788 CTCAGCAGTCCAGTAATCC 57 11998728 11998746 GATGCAGATGTATTGGCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 1 3 3 81 2L 12037051 12037165 TATAGCTAATGACTATGCTGATCCC 59 12036994 12037014 CTGATCCAGCTGGATGTAGAG 59 NA Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0301019 1 1 2 84 2L 12168544 12168563 GTTTCAAGCGCCATATAGCA 59 12168610 12168703 TAATTTCGTTGGCGTGCTG 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0080346,FBtr0300567 3 5 5 88 2L 12304516 12304534 CAGTGCATTGTCCACTTCG 59 12304586 12310690 CCTCGGGTCCTTCAATCTG 59 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 2 2 2 60 2L 12693378 12693396 ACTCCCATCCAAACATGGT 58 12693481 12693501 GCATCATCAAAGGTCATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 1 1 1 60 2L 13256730 13256749 CACAAGGGTTTCGAATTCAG 57 13256848 13256868 GTTCACTCAACGTCAGTATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 2 2 2 169 2L 13308294 13308423 TTTACCTATGCCAGTGGCA 59 13308143 13308161 GGTCAGGTAGATCCACCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0110941 1 1 3 96 2L 13785726 13785803 AATAAGCGTAAGAATCGCGA 57 13785862 13785880 AGACGAGAACCACGTAGAC 58 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 2 5 5 80 2L 14323471 14323547 CAGAAGCGATCGATGTTTCC 59 14323590 14323608 TACTCAAACCGTAGGAGGC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300933,FBtr0300934,FBtr0300935 2 5 9 80 2L 15258830 15258849 TAGCTACTCCGATTTCAGCG 59 15258697 15258791 CGGGATAGATCACAATTCTTCTG 59 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 1 2 3 94 2L 16044331 16044351 GATCGACAGAAATTGGAACAG 57 16044465 16044801 GTAGTGTTCATGATGTCATGGA 58 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003 1 1 4 102 2L 16185533 16185551 AGAGCATATCCATGCGACC 59 16185613 16189033 GTGCGTAGATCATAGTTAATGGC 59 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 3 3 4 81 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 111 2L 16467745 16468061 ACTATTCCGAATCCCTGGC 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 3 4 4 89 2L 16696754 16697510 TATGTTTAGGTGCAAGGGC 57 16697563 16697581 TATGCCTTCTGTAGCACCT 58 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 1 3 4 80 2L 16692116 16696595 ATCGAATAGAACCAGACGTG 57 16696638 16696656 GGTAATTGAGTCCGGACAG 57 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938 1 1 2 80 2L 16702251 16728202 TCGAATATGGATCCTCGTATACC 59 16702193 16702212 ACATTGGGAACAATTGTGGG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 3 5 16 80 2L 16769221 16769240 CATGACCGTGCTTAACACTC 59 16769282 16770467 CCGGAGTAGGTGTAGATGAG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 3 3 16 80 2L 16777432 16779103 AAGATGCGCTACCAAATCC 58 16779147 16779165 CTCGATCAGAACCTTCGTG 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442 3 8 10 107 2L 17394485 17400408 TTATACAGATAACAGCAGCGC 58 17400476 17400495 CCAATGAAGGCAATCTGTCC 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 1 4 4 107 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856752 18856772 CATATAAGGATGCTCCTTGCC 58 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 1 4 4 107 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856752 18856772 CATATAAGGATGCTCCTTGCC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081328 2 1 3 146 2L 20062056 20062161 TTCTGTTGATCTCAACAACGAC 59 20062268 20062286 GTAAGTTCGCAGTTTGCCC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 3 3 7 142 2L 21125431 21126168 AATCATCACCTGACTCGGA 58 21126272 21126292 TATATCTGTGTCCGGATTGTC 57 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 1 3 3 83 2L 21172326 21172344 TATCCACGAGACCAACCTG 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 3 4 4 92 2L 21389066 21390056 ATTTACCGTTGAAACCGGC 59 21390112 21390130 ACGGATCCTCTTCTGTCTG 58 NA Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 2 2 2 102 2L 22168195 22168213 AATGCCTCTCAATCAGGGT 58 22168058 22168131 TATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 3 2 4 92 2R 1328568 1334051 CGATGAAGTTCAACAACCCA 58 1334106 1334124 GAAGAATCAGGAGAACGGC 58 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 1 2 2 87 2R 1394205 1394275 CAATTGAGAATCCTTAGGAACG 57 1394139 1394160 CAAGAATGCTAGATACATCAGC 57 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 2 4 4 83 2R 1925631 1925650 GAGATGGGCTTCAAACTCTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 3 3 3 164 2R 3106660 3107963 CGCATGATAACGAGGTTCG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111089,FBtr0111077 1 3 59 80 2R 3219878 3223231 GAACGTCTACGTACCTCCC 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0088996,FBtr0300481 2 3 8 94 2R 3355988 3356012 CAACTCGAATAAGCTAGTTAAGGAG 59 3355323 3355936 GCACATCAACTCCACAGTG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 3 5 5 80 2R 3371062 3371165 ACTTTATGTGGGATATCGAGGT 58 3371003 3371021 CGCAAGTGCGATCTTTCTC 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 2 3 3 82 2R 3390023 3390042 CGACAATCAACCGTGTATCG 59 3390087 3390158 CCTTTGGCATTCGACACTC 59 NA Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 1 1 1 79 2R 3549901 3549920 GCTCCATGAAGTCCATTAGG 58 3550029 3550049 GGCGTTGTTGATAAGAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112580 1 1 4 125 2R 3742118 3742136 CTTCCTCAAGCCGAATGTC 58 3741853 3742029 ATGTTTGGTATGGAGCCCT 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055 1 1 2 80 2R 4026496 4026514 CATCATGCGCATCTTTACG 57 4025179 4026452 CTGCAGTATGAGGACTGGA 58 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273326 2 1 4 118 2R 4376855 4408632 CGACTTTATTAAAGGGTCCATCAG 59 4376760 4376779 GTATGGATGTGACCGAGGAG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 2 4 9 149 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564107 4565947 GCACGATCTTTGCCTTCAC 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302497 3 1 4 129 2R 5015026 5015044 CCTAACGATGCTCAACAGC 59 5013563 5014937 CTCCTTAACCTTGTCCTTAAGGT 59 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 2 3 3 80 2R 5468499 5468578 TCTACTACGAGGGTTCGGT 59 5468619 5468640 GATGATCTCCGAAATAGAGCAC 58 NA Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 1 1 1 60 2R 5636331 5636350 TTTGGTTCTTTCAATCGCCC 59 5636428 5636447 TTCTATTCGACATTCCAGCC 57 NA DesignNoJunction Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 3 4 4 102 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880559 5880577 TGTAAAGATCATCGTCGCC 57 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 3 4 5 98 2R 5948860 5949131 TTTCACAACCGTAGTGCTG 58 5949193 5949211 ATTGACGTTGGTGTTGTGG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993882 5993901 TCTGGCCCTTAACTTCTCAG 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 1 4 4 80 2R 6097433 6097452 TGTTAATCGCAACCGATGTC 59 6097101 6097391 CCGAACTTTACAGCATCACG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 1 10 17 181 2R 6183479 6183498 TTACAAGAGTCTCCAGGCAG 59 6188084 6192137 TGTTCACGTCTGATCCGTC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 3 10 17 83 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182825 6183262 TCGATTGTTCTAGATTCCCG 57 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460 1 1 3 129 2R 6322088 6322164 GGAAATGGATGTAGATGTTTCC 57 6322251 6322272 CTCTTCAGTCATTAGGTTCTCC 58 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 2 3 3 60 2R 6771530 6771619 TACAAGGATCGTACCATAACGG 59 6771639 6771658 CTTTGAAGTTCGCCTTCTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113069 1 1 4 97 2R 7532456 7538327 GATTCGATCAAACATTCCTAGG 57 7532380 7532398 ATCCAGGTAGGAGAAGACG 57 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088024 3 1 3 116 2R 7914646 7914737 TCGTCAATAGATTAGTGTGCC 58 7914550 7914568 GTTTGCAATCGATTGGCTG 58 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088014 2 1 3 60 2R 8058440 8058460 AAGATTCAGAACGAGAACCAG 58 8055680 8055701 TAACGAAGCCACTACTAAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 3 2 2 80 2R 8256397 8256470 ATGATACAGAGGCTCACTCTG 59 8256510 8256530 TTGACTCCGTGTAGTAAACGA 59 NA Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 2 2 2 100 2R 8668886 8671860 GAACCAACTCAGGGAGGAG 59 8671924 8671942 GGATCTCGGAGATCGTCTG 59 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 2 2 2 81 2R 9022187 9022269 GCACCTATATGGATAAATTCTGCC 59 9022308 9022327 AGGAGCATGTTCTGGAACTC 59 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 2 4 4 80 2R 9074417 9074493 TCAGTAAGATCACGCAGGA 58 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 1 3 12 85 2R 9305328 9306504 AACCGCGATCTTCTGACTC 59 9305261 9305281 ATGATGATCGTGCGAAATCAG 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087704,FBtr0100656 3 2 6 138 2R 9333088 9334648 CTCAACATTCTGCACCAGTC 59 9332561 9332579 CTCCAATTCGCGTACAGAG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087621,FBtr0301593,FBtr0301964 3 4 15 85 2R 9795142 9795160 CTCGGAGTTGGAGTATCGT 58 9792988 9795096 CCACAACAATATCGGAGATCTC 58 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 2 3 8 102 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065442 10065460 CTTTAGGTTGGGTGCTTCG 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 2 1 2 140 2R 10659037 10659058 ACAATACGACCAATTTGTGGAC 59 10659316 10659334 TCTTGGCCTTGGTAATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 3 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 1 4 4 80 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747611 11747704 TGCTCTAGATCTAGGCCCA 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 3 4 5 89 2R 11826756 11827426 CGGCCTTATGAACAACCAC 59 11826685 11826705 GGCATAAAGCTGTTCATCAGG 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 1 2 5 111 2R 11825268 11825286 GTTCGTACCTGCGAAATGG 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 1 2 13 80 2R 11850589 11850610 GCAATTTGTTTGTGTACAGCAC 59 11848682 11850552 GAGAATATGTGTCTTTGATGCCC 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 2 3 3 82 2R 11881891 11881974 TTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219 3 2 3 159 2R 12000324 12000344 GATGACGACGAATTTGAGTCC 59 12000463 12002285 GCTTTATTTGTGATGCCAACC 58 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 2 2 5 116 2R 12220627 12220646 AACTGGACACCTATGTGGAG 59 12214657 12220548 GTAGTTCGGTGTTGTTGGC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 2 2 5 82 2R 12566524 12566546 GTATCTGGACAACATTTATCCCG 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 2 2 2 60 2R 12837674 12837692 TGTGCAACAATTCCCACAG 59 12837571 12837592 TATGGTCTCTACAGGAGAAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 3 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 2 3 6 132 2R 12897656 12897675 GACAAGCTGTCCTACATCGA 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 1 3 3 80 2R 12905299 12905582 CATTGCCTTAACCAGAATCCG 59 12905239 12905257 GTTGTTCTCCATGCCATCG 59 NA Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968 1 1 2 80 2R 12911075 12911213 TACTAACCACGGTCGTTTCC 59 12911256 12911274 TGAAGGTAGACAGCATGGC 59 NA Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 1 1 1 60 2R 12943886 12943906 AAGGCTCAGAAGATAACTCAG 57 12943782 12943803 CTCTGTTTCCCTATTTGTTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 3 2 2 61 2R 12951497 12951518 CATACATTCTATTCGGACCACC 58 12951780 12951799 TAGAATGGCCTCCACAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 1 4 4 80 2R 13312000 13312086 CGGTTAAGAAGGGACATCTC 57 13312126 13312147 GGAGGGCTTAACCATATTAAGG 58 NA Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 3 1 1 137 2R 13405487 13405505 CTGTTTGGAGCCTCTCCTC 59 13405309 13405327 TGATGTTCGTACGCTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 3 3 3 80 2R 13461205 13461294 TGTCGGAAACATACGATTACC 58 13461335 13461354 AGTGATGCAACAGACAACTC 58 NA Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 2 2 2 81 2R 13493408 13493488 GTCACAGTGTTGCTCAACC 59 13493345 13493366 CCTTTAGCTCGTTTAGCATGTC 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 3 2 4 87 2R 13619770 13619836 CGAACTATTGGTCGCTTGG 59 13619886 13619905 CAAGCTCATCACGAACAGTG 59 NA Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 2 2 2 61 2R 13663247 13663268 CAATCAGCAAGGTGAAATTGTC 58 13663145 13663225 GCTTTGACCAGGACATCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 3 2 4 147 2R 13755586 13755802 CGAAGTGGGAGATAAGTGC 58 13755457 13755477 TTCGTCTACTTCTTTGTCCTC 57 NA Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086786 2 1 2 104 2R 13991256 13991513 GATTTACGCACACGTTTCC 57 13991170 13991188 AAGTTGGTGCTATCAGCAG 57 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086712 2 1 2 86 2R 14512327 14512345 ACGCTCCATTACTGGACAC 59 14512203 14512278 TTTGCCATTCTGTTGTAGGC 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 1 5 5 80 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844990 14845239 CTAAGACTCTTGTACCTGATGTG 58 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 3 2 3 198 2R 14892378 14893301 CTAGCATCAAGGTACAGCG 58 14893463 14893481 TGTTCTTCAAGTACCGTGC 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 3 5 6 80 2R 15048910 15048989 CCATTCTCAAGGTCAATGGC 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 1 3 12 80 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 2 2 3 90 2R 15317262 15317337 CAGCAAATGCAATTGTGGA 57 15317389 15317409 TTTCCAGACTTATCAGCATCC 57 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 2 2 3 97 2R 16215631 16215844 GCATAACAGATCCCTCATTACC 58 16215900 16215920 CTTGTCCCAATAATCGTTGGT 58 NA Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 3 1 1 101 2R 16757956 16757974 TTTCTTCGCTCTGATTGCG 58 16758103 16758121 ATATACTGCGAGCGATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 3 6 15 95 2R 16907280 16907298 CTGAATGCCACGAAGAAGG 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 3 2 2 100 2R 17109398 17109416 ATATCCTGACAGCAGCTGG 59 17109244 17109334 ATTGCGGTACATCAGTTCG 58 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350 3 1 4 109 2R 17213145 17213705 GCAACAAGGTCACATACCC 58 17213778 17213796 GCACCAAAGGTACAGAAGG 58 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 2 5 5 200 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546236 TTATCTCCGTGTTCCTCGTG 59 NA Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 3 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 2 3 3 80 2R 18025743 18039164 ATCAACCACTCACGATTCTG 58 18050415 18050434 AGAGACGCATACTATGTTGG 57 NA InUTR Drosophila melanogaster 61 px FBgn0003175 FBtr0071838 1 1 3 89 2R 18428476 18442734 AATGTCCACCAGGCATCTC 59 18428405 18428423 GAAAGTGGTTCTTTCGGCC 59 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0071838 2 1 3 90 2R 18428476 18442734 AATGTCCACCAGGCATCTC 59 18428404 18428422 CGAAAGTGGTTCTTTCGGC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 3 3 13 84 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817834 18819047 TGGATTTGTCCTCATTGCG 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775 1 1 13 80 2R 18818618 18818637 AGAAGCACTCATTGAGTCCC 59 18818680 18819046 GGATTTGTCCTGACTTGCG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080 3 1 2 81 2R 19571962 19571981 CCAATGTCCGGATACAAGAG 58 19572024 19572094 ACTTCCGAGTGATCTTTCAG 57 NA Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 1 2 2 60 2R 19791751 19791834 GTCGCTTATTGAAAGACTCAG 57 19791853 19791874 ACTGTAGTCTATGCATATCACG 57 NA DesignRelaxed Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 3 2 2 60 2R 19791749 19791832 CTGTCGCTTATTGAAAGACTC 57 19791852 19791872 TGTAGTCTATGCATATCACGC 57 NA DesignRelaxed Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 2 2 2 99 2R 20579778 20579858 GGTGAATTCGCAAGTGGTC 59 20579697 20579715 ATTGTACTTGCCCGGATCC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0290092 1 1 3 126 2R 20925373 20925391 TTATCGCTCCGGATTCCTG 59 20925481 20926585 GAAGTACCCGGCAAATTGC 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864 1 1 6 80 3L 153296 167485 AGTGCGCAGAAACTTTACG 59 167529 167547 ATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 2 2 2 157 3L 360878 360897 GATCCCAGCATCAAGAAGAC 58 360681 360759 GCTTGGTCTAGCAAGTACTC 58 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 1 3 3 113 3L 679818 679905 GAATTTAGCGACCTGGCAG 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 1 5 5 76 3L 1635310 1635330 AAGAGGAAATTCTGGCTTCAG 58 1635191 1635209 ATAATGCCCACGACAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292 3 1 2 129 3L 1757189 1757325 GAAACAACCACAGAGGACG 58 1757417 1757436 CCTGATCGTAGTTCCAAGTG 58 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0089864,FBtr0110856 3 3 4 172 3L 2129194 2129212 GGAAAGTACATGGTTCGCG 59 2126657 2129059 GTGTACTTGTAGCCTTCGGT 59 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831 2 1 2 80 3L 2154776 2156648 ATTAACAGGAAAGAGTGTCGTG 58 2154717 2154735 GTCCTTCCACTGTCATGGA 59 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831 3 1 2 81 3L 2154777 2156649 CATTAACAGGAAAGAGTGTCGT 58 2154717 2154735 GTCCTTCCACTGTCATGGA 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072965 1 1 4 88 3L 2500450 2502399 AAGTCTGCTGTATCCCTATGAG 59 2500383 2500401 AGATGATGCCGATCTTGGG 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 2 2 2 80 3L 2961804 2961824 ATGATCCGACTCTCCTATACG 58 2961864 2961943 AATTGTCCAGATTCTGAGCAC 58 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 3 3 4 83 3L 3054406 3054427 GAGCATAGTATTTCGTCTGGTG 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988,FBtr0072987 2 2 4 113 3L 3052758 3052776 TCACCCGCTTTCATACTCG 59 3052853 3052948 GTTCAGTAGCTCCACAGCA 59 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 1 5 5 84 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131028 3131121 GTTGAGAGTCGATATTATGGGC 58 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 2 1 1 119 3L 3159443 3159462 TAATCAGGAATCTGGGTGCC 59 3159283 3159301 CCTTCTTAGGCTCCACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 3 2 2 90 3L 3372839 3372977 CGAGAGTGGTAAATTTGCAG 57 3372768 3372786 AATACTAGGCGGCAATACC 57 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 3 6 13 178 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593476 3593494 AAGACCTCGGATTTGGGTC 59 NA Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 1 1 1 60 3L 3805830 3805850 GCACAAAGGACATTAAAGCTC 58 3804734 3804752 TGTATCAAACGTGGTCGCT 59 NA DesignNoJunction Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 1 3 3 101 3L 4369887 4369911 GTATACACCTTCATGTGGATATCAG 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 3 6 6 205 3L 4418980 4418998 GCAACTATCTGCAACGCTC 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 3 4 6 239 3L 4418264 4418283 CAGGCGATGTAATTGAGGTC 58 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 1 5 5 80 3L 4505303 4505415 ACTAAAGTTTGAACAGGTTCGC 59 4505244 4505263 AGATTTGCGATGTCGAACAC 59 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 3 3 3 150 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552226 4552247 TCGTCTACCCAGAAGTATTTGG 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 2 4 4 80 3L 4580096 4580114 CTGCATTGACTCCTATGCC 58 4580155 4586596 CTATCCTTTGTGAGAACCTCCT 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 2 6 6 78 3L 5765429 5765447 AACGGCTAGAGGATATGGG 58 5765546 5765564 CGCTCCAAAGAGAATTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 3 6 6 79 3L 5765428 5765447 GAACGGCTAGAGGATATGGG 59 5765546 5765564 CGCTCCAAAGAGAATTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 3 2 2 68 3L 5788653 5788671 CAGGATTTGTCCAAACAGC 57 5788198 5788216 CAGATTCTCGTACGTCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 3 4 4 80 3L 6685396 6685485 CTTCGTAATAACCGGTCTTACAG 59 6685338 6685359 TATTCCGAGAAGTTTAGACCCA 58 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 1 2 2 110 3L 7315586 7315662 GTTGAAAGAATCCGTCAAGG 57 7315495 7315513 TTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076885 1 1 2 89 3L 7316340 7316358 AAACACCTCTCAGCTTCAG 57 7316204 7316287 TGGAGCAAACTTTCCTACG 57 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 3 5 5 99 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333862 7333988 AGTAGTCATAGTCCCTAAAGCC 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 3 3 4 92 3L 7506484 7506632 TCGAAATGGATCACGACCA 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 2 7 7 148 3L 7811288 7811308 ATAGCAAAGAGATCATCTGCC 58 7810754 7811179 GTCGGCATATTGTGTTACCT 58 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 2 3 3 80 3L 8262216 8262820 GATTTCCGATACCAGACAGC 58 8262863 8262881 TATTCACGTGGCTGATGAC 57 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 3 4 4 129 3L 8461059 8461077 ACAAGATGGTCAGCCTCAC 59 8461168 8461248 AATATCAATGGGCAATGGCTC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 3 3 13 178 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631266 ATACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 1 5 13 83 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 1 2 4 80 3L 8735364 8735448 GCTGAACATCAATTTGAAGCC 58 8735304 8735324 AAGATGAACATCCTCAAGCAG 58 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 2 2 4 105 3L 8738136 8738154 AATACTCCTACCGTGCCAC 59 8737418 8738067 AAACGGATCTTGTCCTCCA 58 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 1 3 3 80 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0076565 2 2 5 122 3L 8927237 8927519 ATGGCCGTTTACCAGTCTC 59 8927133 8927153 TCGTCCCAGTAGTACATTAGC 59 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 3 2 2 117 3L 9723646 9723664 AGTACTACAGCGGTCTGTC 58 9723837 9723855 TCCTTCCACTCAGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607 1 1 3 142 3L 9730372 9731219 TACCTTCAGGGTCAAGTGG 58 9730248 9730266 ATGCTGATTAGCTCCTTGC 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 7 8 96 3L 9817654 9817674 TCGACGATCAAATAACGAAGC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 3 1 1 154 3L 9962328 9962346 CAAGGCCACCCTTTATCTC 57 9962973 9962991 AACGACACCCACATAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 3 3 3 185 3L 10687816 10688134 TTATATTCCAGATTGCTGTGGG 58 10687652 10687672 GTAAAGCAGGCACAGTATCTC 58 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 1 3 4 80 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032792 11032810 AGAGATTACCAACGGAAGC 57 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784,FBtr0301967 3 5 5 81 3L 11109448 11109535 ACAATACACAGGATCTGTTCCA 59 11109388 11109406 AGCTGGGCATAGCTATACG 59 NA Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 2 2 2 80 3L 11195966 11196053 TAGACTTGGAAGAGACAAACC 57 11195906 11195924 GAAACTGGTCGAAGAAGGG 58 NA Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 1 2 2 139 3L 11688021 11688039 GCCACTTAGTCCTGGAGAG 59 11687836 11687920 ACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113168 3 1 3 97 3L 12471220 12474756 TCAGGTGTAGTGGCTATGTG 59 12471142 12471160 TGATCCGTGGTGATAGTGC 59 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 1 3 3 118 3L 12842191 12842272 CAACTCTTAATGCGGATGGC 59 12842092 12842110 TGGTCGCTCCCTTATTGTG 59 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 3 2 2 80 3L 13432678 13432759 TAAGTCGGACTGTCAGATCC 58 13432617 13432638 ATTCCTACAGTAGTAACGGGTG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099992 1 1 2 80 3L 15074251 15074440 ACTATAAGCCTGCAACCGA 58 15074189 15074207 TAAGGGAGGTATTCGCGAC 59 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 2 3 4 80 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505317 15505337 TTTGGTGACATTCACATCGTG 59 NA Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 3 2 2 94 3L 15972040 15972061 CTGCAAATGAGTTGTATTCAGC 58 15972113 15972415 TGCTTGGTTTATCTTCTTAGCG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112852 1 1 7 148 3L 16058395 16058413 TTCAACAACACCCACTCGA 59 16058520 16059131 GTCGGTTTCCTGTAATACATTGAG 59 NA Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 1 2 2 80 3L 16087581 16087599 TATCCGTTCCTAGACAGCA 57 16087643 16087719 AGTTTCATTCCGCTTTGGT 58 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 3 2 2 69 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854419 16854440 ATGCATGTAAACTGTGAACCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 1 10 12 133 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914387 16914405 ACAATAGGGCTTCTCGTCG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 1 3 10 191 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923958 16923976 TTGATAGGCTCCATAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 3 3 5 97 3L 16983972 16984126 ATTCGTAGATGACTCAGACCA 58 16984185 16984203 GATTTCCATCCTGGCTCTG 58 NA Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 2 2 2 137 3L 18106214 18106232 TGCTTACTGCAATAAGCGT 57 18112923 18112941 GATCAGGGTGATCCTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 2 2 4 143 3L 18668069 18668328 TCCATACCAGATGAGCCTG 58 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 1 3 3 184 3L 18874333 18875419 GGGTCCAGAACAAATACACG 59 18874070 18874186 AGTTGATCCACTGGTAGGG 58 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 1 2 3 81 3L 19488009 19489659 CTGCATGTGGTATTCCGAC 58 19487946 19487970 GATAGTAGGTCTCATTTACATAGGG 58 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 2 4 4 81 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634304 19635000 CTTATAAGCAACACCCTTCACG 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301607 3 1 5 93 3L 19792717 19794556 CACTGTGAGACCTTCATAGC 58 19794611 19794630 GCAGAGATCTCCAAATGGAG 58 NA Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 1 2 2 80 3L 20237606 20237625 ATGAGTTTGTCTGGAACTCG 58 20237666 20238046 TATGCCCACCTGTATAATGAG 57 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 1 2 3 80 3L 21565944 21565965 CAAGTTCAGCGAATTTATGGAG 58 21566003 21566089 GAGTCAAAGTCATATTTGTCGG 57 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 2 3 3 80 3L 22282028 22282110 GGGAAAGCCCAAATACACG 59 22282154 22282172 GTGCCAGCAAGAATGTGTC 59 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 3 4 4 88 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709222 22709241 ATTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 1 5 5 84 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776574 22776593 GTGCTCGTTCATTTGATCCA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 1 4 4 175 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 3 4 4 90 3R 293416 293435 TTTCTACTACATGATCGCCG 57 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 6 10 106 3R 570265 570283 TAAGCCAGAAGACGACCTC 58 569896 570198 TCAGTTGAGTATCCATATCGGT 58 NA Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 1 2 2 105 3R 992799 992887 CAATCGGAACACGATTGGT 58 992956 992974 CAACTGCATAGAAGCTGCC 59 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 2 2 3 80 3R 1008598 1009507 GTGTGCTAGATATCGAGCG 58 1008536 1008555 AGGAACATGGTTAGCTTGTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0273434 1 1 19 157 3R 1125285 1138718 AAGAACAGGAGCAAATCGC 58 1124166 1124184 ACGGTGTAGGAAATGGTGG 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 2 5 5 86 3R 1684299 1684375 TCTTCTTCCAAGCCAAGGT 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 2 6 11 80 3R 2724256 2734249 TTGGTAAGTGTCAAGAACGC 58 2724195 2724216 AGTGAAACTCCTTCTCTAGCTC 59 NA Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 1 1 1 109 3R 2905012 2905032 ACTTTGGTCCGATAAAGAAGG 58 2904689 2904707 TTTAATGGCCTTCAAGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 1 1 1 60 3R 3597124 3597145 ATCCCAGCTACGATATAAAGCA 59 3597026 3597044 TCCAGATACCGCACATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 2 2 2 196 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625526 3625544 GTACGACCTGTACATGTGC 58 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0113203 2 1 5 87 3R 3693816 3693834 ACATCACACGATGATGGGT 59 3691470 3693770 CTCATGTAGAGTAGCTTCTTTCTG 58 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 1 4 4 80 3R 3848721 3848741 TCCTGAACGAAGACATAACCA 59 3848600 3848679 GGACAGATGCCAAGTTGAC 58 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909 2 1 4 109 3R 4547270 4547349 AAACCACAAGTCGGAAGAG 57 4547420 4547440 GATAATTGACCAAGGAGTCGA 57 NA Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 3 1 1 60 3R 4834597 4834616 ACAGATCTACCAAAGAGCCA 58 4834697 4834715 TTCCTGAGTGTTCCTACGT 58 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 2 1 1 76 3R 5380878 5380896 ACTGCTGTCCAAGAAACTG 58 5380759 5380780 GGCACTCATAGAGACAATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 1 2 4 97 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515567 5515585 GTATCAGACCCGGACTCAC 59 NA Nonspecific Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 2 3 4 71 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520884 5520902 CGATAGAACTCCGACCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 3 5 9 80 3R 5835091 5835469 AACAAAGAGTCGTGCATCG 58 5835029 5835047 CGTAGATCGTACCCAGGTG 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 2 3 6 80 3R 5930727 5930805 GTGTTTCGAATCAAGATCGCT 59 5930667 5930686 GAACACAAAGGGTACATGCG 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 2 7 8 89 3R 6417178 6419287 GAAGTCGACTCACTGATGG 57 6411627 6411647 GAAGTTATCGCATAACTCGTG 57 NA Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 3 1 1 93 3R 6533585 6533603 CAAATGTCCGAGTTGCCAC 59 6533439 6533458 CACTCATGCATCCTTCTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 2 5 5 127 3R 7047972 7047990 GGTAAGGTTAAGGCCTTCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 2 2 2 60 3R 7068726 7069512 TGCTTGTGGGTATTACCGG 59 7068684 7068702 TTCCGGTACTTGTACGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0301826 3 1 4 125 3R 7614036 7614191 CCATGATGATCGAGAGTTATTTGG 59 7614271 7614293 ACTCTATAGTACAGTCGGTTGTG 59 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 1 2 3 80 3R 7642966 7642985 TTGTTCAGTTCGAAAGCCAG 59 7642469 7642924 TCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 3 2 3 122 3R 7777491 7777509 CGAACGAAGAGATTGCAGC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 2 2 3 156 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213640 8213711 AGCGAGAAGACTTCCTTCAG 59 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 3 3 4 84 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338671 8338690 CCGATCCAGAATAACACCAC 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 3 3 4 80 3R 9257247 9257399 TCAGCTCAGTGTTAAGAGC 57 9257185 9257205 GATGGATCTTTGACAATGGAC 57 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 1 2 3 80 3R 9484276 9484366 CAACAAGGGTAACCAGGGT 59 9484214 9484232 ATATTTCCACCCTGGCCAC 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 2 3 5 81 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522055 9522556 GTCGTAGTTTGTATCTATCCGG 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 2 2 5 150 3R 9582374 9582912 GTCAGATCAGGAATCGCCT 59 9583026 9583044 TTGACCATGTTGTCCACCA 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 3 2 5 150 3R 9582375 9582913 TCAGATCAGGAATCGCCTG 59 9583027 9583045 CTTGACCATGTTGTCCACC 58 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 1 3 3 80 3R 10968727 10968746 CGCATTATCCAGCGTAATCG 59 10968572 10968685 GGCCTGTCTGTAGTAAATGC 58 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 2 2 3 84 3R 11085400 11088278 ATCAAGCTGGGTTATGCCA 59 11085334 11085352 ATGCATCCGATACGAAGCT 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957 1 1 13 99 3R 11126776 11126795 TCAACACCCGTCTAAAGGAG 59 11128936 11132072 ATTAGGTCGTCTTCGAGCC 59 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 2 2 2 81 3R 11151702 11151723 CTGCCCAAAGTATTGTAAATGC 58 11151565 11151660 ACACGGTGAATCTCCAGAG 59 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112667 1 1 3 105 3R 11192307 11192877 GTCAACAAAGTTGAGCAACTG 58 11192222 11192240 CTGTGTTGCTCTCAGTGAG 58 NA Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 3 3 3 97 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616525 11616546 TTCTTTGTGTAGCTTCTCACTG 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301479 3 1 2 98 3R 11885015 11885036 CCCATTTCACAAGTACATCGAG 59 11885095 11885198 TAAGAACGAGTAGCTGCCG 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233 1 1 6 80 3R 11900191 11900211 GCCACCATTAGTCTTACAACC 59 11899116 11900150 CTCGGATAGCTCATCATCCT 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333,FBtr0083332,FBtr0112803,FBtr0300036,FBtr0083334 3 5 6 115 3R 12462194 12462214 AGTACACCATGAAGGATCTGG 59 12462291 12462718 GATCACATAGCGTCCAGCT 59 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 1 3 3 81 3R 12894607 12894696 CCTTTGAAACCAATAGGGCTG 59 12894739 12894757 ATGCTGAAGTAGTCGACGG 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0089471 2 1 5 155 3R 12932800 12932818 CTCCGTGGAAGTAATTCCG 58 12931523 12932682 TTCATGATCACACTTGGCTC 58 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 1 4 4 80 3R 13519321 13519448 CCACCAGATCAAAGTCCAC 58 13519259 13519277 CCTAGCATTGTAGCCTGGA 58 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089772 2 1 4 81 3R 13692945 13692963 CAGGAGGACATCTATTGGC 57 13693007 13694216 CTCGTATGGTCGTAACTTCG 58 NA Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 1 2 2 91 3R 13991871 13992084 TGGTGAAAGTAGGAGACTCC 58 13991799 13991817 CTTGCCATTGACGAGATCG 59 NA Nonspecific Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 2 2 2 60 3R 13992106 13992125 AATCATTTCACTGCGATCCC 58 13991871 13992084 GGAGTCTCCTACTTTCACCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 3 2 3 80 3R 15230400 15230420 AAAGCGGACTATCCTAAATCG 58 15230459 15230572 TTCGGTTAGCTGAGTTATATCC 57 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 2 2 3 80 3R 15229771 15229791 GTATCAACAAGCCTGAAGACC 59 15229832 15230033 GGCGTAAAGCTTTGTGTAGG 59 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 3 4 4 87 3R 15443470 15443562 TTCAAGAGCATGGTGATCAC 58 15443402 15443420 GCGAGAACATGATGAAGGG 58 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 3 4 4 87 3R 15443470 15443562 TTCAAGAGCATGGTGATCAC 58 15443402 15443420 GCGAGAACATGATGAAGGG 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 2 4 7 97 3R 15600340 15600359 TATATCGCGGATCACCTTCC 59 15600416 15600650 CTTAGAAGGTCTCATCCTCCTC 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083827 3 1 5 147 3R 15842472 15842565 AAAGGATGGCAATCTCTTGAC 58 15842674 15842692 GTAGGGATTCGTTATGCGC 58 NA Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 2 2 2 154 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865317 15865336 CGTTGATATAGTACTCCCGC 57 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787 1 1 2 99 3R 16122131 16122149 AACTTCAATGTGCCAACGG 59 16122207 16122827 CTTCTTCATCTCTAAGATCTGTGG 58 NA Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 3 1 1 65 3R 16407155 16407174 GTCTACAGTTCCTACGAGGA 58 16407052 16407070 TAGATCTCCTAAGGCGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083958 1 1 8 81 3R 16598540 16598558 TCCATATCGGACCTTCAGC 59 16598602 16617483 ATTACCTTCCGCCATTTCAG 58 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 2 2 2 80 3R 16737741 16737762 GCTAATAAACGACTTGTATCGC 58 16737624 16737701 CCGTACTCTTCCTTCAACAC 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 2 4 9 112 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798981 16798999 AGTTTCTTGGGCAAGAAGC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0110937 3 1 16 80 3R 17036415 17036518 TTGCTCAAGAAAGAAGAGGAC 58 17036558 17036578 GGTGGGTATCAGATCATAGCA 59 NA Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 2 2 2 102 3R 17101292 17101368 AGATCACGAGCATCAGTCC 59 17101208 17101226 GCTATATCCTCCGATCGCA 58 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 2 2 2 79 3R 17840999 17841017 TCTCACGAATATCCAGCCG 59 17841133 17841151 ACTTCTCGTGCTTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300008 3 1 3 83 3R 17957057 17958390 CGAATCAAATTTGAGGAGATGC 58 17958432 17958452 CCTCAATTCGGTTATCTCACG 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0084260 1 1 3 141 3R 18340765 18340783 GATAGTTGCATCACTCCGC 58 18340887 18342354 GAAACAGACTCTTGAGGGTC 58 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368 2 2 3 80 3R 18946207 18946226 TCTACAACAGCACTTTCTCG 58 18946269 18946349 TTGTTCATCTCCTGGAAGC 57 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 2 3 3 104 3R 19631552 19631570 CCATATTGCCGGACATAGC 58 19627948 19631484 ATCAGAGCGTCAAGACCTG 59 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 3 3 3 119 3R 19633220 19633303 ATTCACAATCTCACCAGCG 58 19633119 19633138 GATCTTGAAGAGCTTTCGCT 58 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889 1 1 2 191 3R 19722327 19722799 TGATGCAGGGACAAGAGTC 59 19722154 19722172 CAATGGCAAAGGATCGTGG 59 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 2 2 2 80 3R 19721216 19721947 CAGAAGGATACGAGAAAGAGC 58 19721156 19721176 GTTATCCAACTCAGTCATTGC 57 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 1 5 5 80 3R 19792355 19792373 AAGCCAACATACTGTCACC 57 19792417 19798180 AAAGTTGCAAACTTCGCAG 57 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 2 5 5 80 3R 19792358 19792377 CCAACATACTGTCACCACTG 58 19792417 19798183 GATAAAGTTGCAAACTTCGCAG 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 3 5 5 101 3R 19824625 19824644 ATAAGGAGCGTGATCTCGAG 59 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 2 2 2 64 3R 20199729 20199813 AAGTGGGACTATGCCTACTC 58 20199684 20199702 ATGTGATGTTTGGGTGGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581 2 2 18 127 3R 20521078 20521096 CAAAGCGTGTCATGAGGAC 59 20525144 20527824 CAGGATGGTGTTCATTTGCA 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 3 2 3 155 3R 20677422 20677566 GGAGCAACTATTGCTCAAGG 59 20677730 20677754 CTCGACGTTTATTAGATGTAGTACG 59 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112559 3 1 2 89 3R 20885201 20885220 CATTTCCAGTCGACACTTCC 59 20885272 20885941 AGATCTGTGACGGTCATCG 59 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 3 3 3 98 3R 20924346 20924364 CGCTGTGATACTCCATTCG 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 2 2 2 153 3R 20954241 20954259 AAACAACGGAAGAAACGCC 59 20954374 20954465 TCTTGAGCATCCTTTACTGCT 59 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 3 2 2 80 3R 21098641 21098716 AGATCCTTCTATGCTGCCT 57 21098760 21098778 ATCCATTGATGCCTCTTCC 57 NA Nonspecific Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 3 5 5 104 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507760 21507838 AAAGATGGCGTAATGGTCAC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 3 4 7 93 3R 21575099 21580074 GTTTATAGAGGCCACTTGCTC 58 21575026 21575044 ACAATCGCTCTCCTGATCG 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 2 3 3 96 3R 21717670 21717688 AATGGTCAGGGTTCATCGA 58 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 3 4 9 162 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699586 22699604 TCTAGCGGCGATATTTGCT 59 NA Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 1 1 1 60 3R 22771841 22771861 GAATGGAAGGACTATACGCAG 58 22771944 22771962 TATAAACAGAAGAGCGCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 2 5 5 127 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529568 23529643 TAATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 3 3 3 84 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758241 23758260 GTTGCAAACCTCGATCACAG 59 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611 1 1 2 80 3R 23795434 23795452 TCTACGACATCTGCTTCCG 59 23794904 23795390 ACATTGTGACGGAGACGAG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299751 1 1 13 97 3R 24732972 24732990 TATCACCAAGATCGAGGGC 59 24733048 24733441 CTTCACTCATCTGCAGATACTG 58 NA Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 1 3 3 96 3R 24852820 24852839 CAAATGCTCTAAGCTTGACC 57 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 3 3 3 144 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951643 24951661 CCGATTTGGTGCGAATCTG 59 NA Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 2 2 2 80 3R 25736583 25736672 CAGTCAACAGAAACTCCTCC 58 25736714 25736733 CTTCGGTCCTCTCACTAGTC 59 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290050 2 1 2 200 3R 25996398 25996731 TAATGAGTGGAGCTGATGC 57 25996216 25996235 CGTCTGGGTCAATATTGGAG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 1 4 5 81 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211910 26211928 CTTGATCTCCAGGTCGAGG 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 1 2 4 105 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26275586 26275604 GGTCATATAGTGCTCGCCA 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 2 5 5 82 3R 26289004 26289024 ATCTGCTCTATGACATCTCCA 58 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 3 2 2 91 3R 26317439 26317457 ATCTTCATCGATCCCTGCA 58 26317511 26317598 CATCCAGATGTTGCCAATCC 59 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653 2 1 2 80 3R 26315980 26315999 AAGAACTCCTAAATGCCACG 58 26316042 26316112 TTTGCTCAACATACCTGCG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 8 13 153 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419563 26420549 GTAGAGTTTCTGGTCGGTG 57 NA Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 3 2 2 63 3R 27421798 27421817 GTCAACTCCTACCTGAAGGG 59 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 1 5 5 80 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427006 27427024 TCGTACCACATCTTCAGGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 2 3 22 82 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707521 27707542 CCAGGTCCTGATTGTTATTGTC 59 NA Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 1 2 2 162 3R 12677052 12677070 TTCCTATCGCCACTCACTG 59 12677196 12681548 ATGGATGTCCTTGGTCCAG 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 1 8 8 166 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158059 TAAACCAATTGCTTGCAGC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 2 6 7 82 4 470583 470875 AAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 3 6 7 83 4 470582 470875 TAAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 1 4 4 82 4 596941 597612 TAACGGAAACGATGACCAC 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 2 2 2 99 4 1052491 1052511 ACACTTCTCAGTTAGTTCGAG 57 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA InUTR Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 2 5 8 94 4 1128963 1129110 TTCCATTGGAACAGGTTCG 58 1129168 1129186 GAGGGACTGTTTGTTCCTG 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 1 5 5 80 4 1230675 1230693 CAAGTAGCTCAAGTGGCTG 58 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 vnd FBgn0003986 FBtr0070110 2 1 2 157 X 485842 485860 CTTATGCTTCCATCGTCGG 58 485980 487695 TTTGCATCGAATAAGCCAGG 59 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 2 3 3 80 X 528200 528221 GAAGTTGCTAATCATACAAGCC 57 528073 528161 GTCACGTCTATCCTAAAGAGC 58 NA Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 2 2 2 60 X 787528 787546 TCTGGACGTTCATCAGGTG 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 2 1 1 85 X 925022 925040 CACCAAGGCTATCATGCAC 59 925147 925166 TATTCACTCCGGGAATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968 3 2 3 90 X 1127850 1127869 CACCTTTAATCCGGACAGTG 58 1120307 1120888 GACCAGACTTTGCAACTCG 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0300428,FBtr0300430,FBtr0070261,FBtr0300427 3 5 9 94 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1541414 1541432 AATGACGCCACTGAGTAGG 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0302028 3 1 4 80 X 1643847 1643961 CCTCTGGATACTCAAGGAGG 58 1643786 1643806 ATAATTATCGCTTGTCCGGAC 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 1 3 3 80 X 2243029 2243047 AGTAAGCTCTTGTCCCTCG 58 2242900 2242985 ACTAGCATCCACTGGACTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 3 2 2 178 X 4528060 4528080 GGATCTAGGAATCGATTTGCT 57 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 2 4 4 91 X 4619145 4619164 CCAGCACTATGACTATCCCA 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852,FBtr0070850 3 2 3 260 X 5559943 5559962 ACCTCTAGTAACGTAACCGA 57 5559501 5559519 GAACGGTAATCGGGAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809,FBtr0070810 1 2 2 87 X 5652347 5652365 CATGATCGGCGACAAACTG 59 5652473 5652491 GCTATTGCTTAGTGGCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 2 2 2 118 X 5803874 5803954 TTGAGATGACCCGATTGCT 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 2 6 6 116 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944208 7944226 CTCGAACTGCTATCACTCG 57 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089974,FBtr0100376,FBtr0089977,FBtr0089978 3 4 7 152 X 8117889 8117996 CCAAGATAACGGTCCACAC 58 8118849 8118867 AAAGCTGTGATTGTGGTGG 58 NA Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081 1 1 2 94 X 8302799 8303443 TGTTAAGTATTCTCCACCGCT 59 8302725 8302743 GAATCACCATGCGATAGCC 58 NA InUTR Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 3 4 6 82 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442550 8444127 CTTCATTCATGCCTGTATCGC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 1 2 6 82 X 8478890 8478908 ATCATCTACTGCTACGGCG 59 8478954 8479858 GATTCCTCGAGCGAAACTG 58 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 3 3 3 88 X 8488872 8488955 GTACCTTCATCGAATGGTTCTG 59 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271,FBtr0071270 3 2 10 86 X 8770365 8770386 GTAAATCATTTAGAGACGAGCG 57 8769882 8770072 CTGGTTCATCACCCATGTC 58 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0071429 1 1 2 84 X 9858451 9858470 GCTTAATGAGCTACAGGGAC 58 9858315 9858404 CAATGGGCGAAGTAACCTG 58 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300512 3 1 8 121 X 10180571 10180591 CCTTGTCCTCAATTGTATCCG 58 10173213 10180490 ATGTTCCATCATCTTGACGAC 58 NA Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 1 1 1 60 X 10220796 10220815 TGATTAAATTGTCCGCGGAG 58 10220898 10220920 CGGTATACTTTGACACTGTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 2 2 2 64 X 10500508 10500528 TCCGTTGGCAATATGATTGAC 59 10500165 10500183 TTTATGTGGTTGTCGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 1 4 4 116 X 10676325 10676422 GTACAAGCAGGTCTTCCTG 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 1 7 15 107 X 11275918 11275936 TTGGATGACTCGAAGAGCA 58 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 3 2 2 80 X 11450006 11450024 TTCTGTTTACTCCTCGCCT 58 11449814 11449966 GTGGTAAATCAGCTCATAGATCG 59 NA Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 2 2 2 101 X 11476639 11476657 CTCTTCACTTGCACTTCGC 59 11476497 11476575 CTCGCCTAGTCTAATCAGCT 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 3 6 6 174 X 11688876 11688897 CAATGGTTAAGACCTATTGCCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 1 4 10 84 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 3 1 1 71 X 12271382 12271401 GAGACTACCTGGGAGTACAC 58 12271221 12271239 AAAGATGAAGACCTGGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 2 3 3 137 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466535 12466554 TTCTTCACCTTGACCTCCTC 59 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0273245 3 1 3 79 X 12475648 12475666 ACTCCGTGATAAGCAGCAG 59 12467875 12475607 GATTAGGAATCGGATTGGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445,FBtr0113444 3 2 2 82 X 12498605 12498686 TTTCATTCAGCGGGTTTGC 59 12498732 12498750 GACTCGCAAATGAGACACG 59 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 2 1 1 99 X 12600718 12600737 ATATCTTTGCCGTACTGCTG 58 12600934 12600952 AAATAGCCCTCCGTTTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 2 2 2 80 X 12706248 12706268 GTCTACAAGCACTACAACGAG 58 12701247 12706209 CGTTATGGCATACATCATCTGG 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0112848 1 1 4 92 X 13094934 13096789 GTCTTTATTGGCGCAGATGAG 59 13094862 13094880 TGATTATTCCCGACTCCGC 59 NA Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559 1 1 2 119 X 13308918 13309083 AGACACGCTAAAGTCAGAC 57 13309166 13309184 TCTTCGGTGACCATTTCTG 57 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 1 5 10 81 X 13493486 13494113 GAAGAGTACACCAGCTCCG 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451,FBtr0301449,FBtr0112980 2 3 5 82 X 13539830 13543423 TAATTTCGGCATGAGAATGACC 59 13543465 13543484 TCGATGGTATGCGAAATCCT 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303 2 1 4 80 X 13702514 13702832 AATACAGATACCAGCTCCCA 58 13702873 13702893 TGTGGGTAGAATTGCTAATGG 58 NA Drosophila melanogaster 61 Ste:CG33237 FBgn0053237 FBtr0300086 3 1 1 60 X 13954156 13954174 AGTGAACTGGCAACATGTC 58 13954057 13954075 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0113318 2 1 2 175 X 14100667 14100686 AATAACTTTGCCGACAAGGA 57 14099476 14100399 CTGGTAACGATGAGCTGTC 58 NA Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073944 3 1 2 107 X 14485109 14485361 ATAACAGAGGACATAATGTGCC 58 14485023 14485041 CTGATGAGTCGGTCTCTGG 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 3 4 4 115 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641988 14642006 AAGTAGCAGGGATCGTTGG 59 NA InUTR Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 3 3 3 85 X 15219543 15219623 CGAGTCCGAGTATCATTCGA 59 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 3 2 5 104 X 15272262 15272280 GCTACAGTCCCTCCTATCG 58 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 1 2 5 89 X 15265708 15266192 GTCAGAATGGTGATATCTTCGC 59 15265640 15265658 CTTGGTGCTTCTGGATGTC 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 3 6 6 278 X 15755486 15755506 TTATCCGACTAAGCTACTGGC 59 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 1 3 3 103 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802264 15802282 TGCGTACTGATTTGCTCGA 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 3 4 4 84 X 16193750 16193839 AGCTATTTGATCAAACTGGCG 59 16193885 16193903 TCTCGATGCGTTCTCTGAG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301 1 1 9 114 X 16270192 16270284 CCACCTACAAATCGATTTCGT 58 16270358 16270690 CCATTCAGATACCACTGTTCC 58 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 1 2 4 84 X 16602744 16602763 TATCCGTACGACAATACGCC 59 16603311 16603421 AGTAGGTCTGGAACATCGC 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 2 5 5 89 X 16719516 16719535 GGATCTGGATGGTACTTCGA 58 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 1 3 4 80 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022947 17023197 CAATGACCTGATGACCCTG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089657,FBtr0089661 2 2 8 108 X 17835183 17836827 CCAGGTACATTAGGTCAACAC 58 17835095 17835113 GTGTTTCTGTCAATCCCGG 58 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 2 3 3 90 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317591 18317609 GCACTAATCGAATAGGCCG 58 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593 1 1 2 92 X 18412047 18412863 GTTCGAGCTGAAGGAAGTG 58 18412919 18412937 ATCGATAGGATCTCACCGC 58 NA Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 1 2 2 107 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18801838 18801856 GTGTCCACCTGACCATACC 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074734 2 1 2 164 X 19503512 19504421 ACAACTACCAGCTCAACGA 59 19504614 19504632 CACAACAATTTCCTCGGGC 59 NA Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 3 1 1 60 X 19572308 19572328 CAATGTGATCCTCTTCAGCAC 59 19572186 19572204 GATCACGTACAGTTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 1 2 3 80 X 20543398 20543926 GATTTAAAGACATCGCAAGTCC 58 20543339 20543359 CTTCCAGGAATATTCCGAAGC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299522,FBtr0299523 2 3 5 91 X 21900448 21904482 AGAACCGGATAGCCAAGTC 59 21904536 21904555 CAATACTGTGTCTTTGGCGA 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640f FBgn0083021 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:56EFb FBgn0011870 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32357 FBgn0052357 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32123:Psi FBgn0052123 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Sfp96F FBgn0261061 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31382 FBgn0051382 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Pp1-Y2 FBgn0046698 FBtr0113894 1 1 1 61 YHet 280350 280368 TTCGTGGAAACCATGAGTC 57 291306 291326 CATGCAACTATAACAGTCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG40441 FBgn0058441 FBtr0113890 1 1 1 60 YHet 205239 205259 GCAGCACATCATAAAGTTCGT 59 205199 205217 GCAACCATCCTTAAAGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1192a FBgn0083001 FBtr0113566 3 1 1 60 X 17038538 17038557 TGTAGACCAGATCGAGAACC 58 17038497 17038517 TTTCGAAGCTCAATTCTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 1 1 1 165 X 6174472 6174539 TGTGAAGGTGTATCGCGAG 59 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300446 1 1 2 101 X 657548 657566 CTAAGTACCCGCTAGTGGG 59 657016 657483 GTACTTCTCCTGATCCCGT 58 NA Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 1 2 2 169 X 22246595 22246613 TTATGTGGCCAGACTTGGG 59 22230963 22230982 ACCATTCTCTGGACATTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 1 2 2 97 X 20919537 20919555 CTCAAGTCGGATGCAACTG 58 20919615 20919700 AGGACAGAACCATCATCCTG 59 NA Drosophila melanogaster 61 CG15456 FBgn0040650 FBtr0077323 3 1 1 73 X 20297849 20297867 TTGGACATATCCTGTCGCA 58 20297794 20297812 TTCGAGTGCACTAGCTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33496 FBgn0053496 FBtr0089609 2 1 1 62 X 20081408 20081426 CATCAAGCACGAGATGTCC 58 20081270 20081382 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rpp20 FBgn0066304 FBtr0091935 1 1 1 80 X 19638700 19638792 AAGACAGACTTTAAGGCCCA 59 19638833 19638853 CATGCAATGCAGAAAGATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG7992 FBgn0031004 FBtr0074690 1 1 1 194 X 19140420 19140779 GATGGATTTGACCACGTCG 59 19140244 19140262 TACATTCCGGCTGTAGGAG 58 NA Drosophila melanogaster 61 CG14190 FBgn0030979 FBtr0074663 2 1 1 60 X 18959528 18959548 ATGTTCGAAGCAGAAATGTCC 59 18959568 18959588 CTTCATCCATTCCGGTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 3 1 1 92 X 18553986 18554004 GTTCCTAACGCAGTTCTGC 59 18554059 18554146 GAATCCGATTGCCTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15042 FBgn0030937 FBtr0074619 3 1 1 60 X 18421544 18421565 AAATATGGATGCAAACGATCGG 59 18421505 18421523 ACGCTTGGGTCTATATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32547 FBgn0052547 FBtr0290002 2 1 1 90 X 18340185 18340203 TACCTGATGTTCGTGTGGG 59 18340004 18340131 GCTCCTGTTCATCTCTGGG 59 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 3 6 6 80 X 18286505 18286591 TCATCAAACATCACCAGGTG 58 18286444 18286463 TATTCAGGACATAGACACGC 57 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508,FBtr0112999 3 2 2 102 X 17939388 17939653 AAATGCCAATATCCTGCGG 58 17939719 17939737 CTCCGAGAGTGGAATCTCC 59 NA Drosophila melanogaster 61 e(y)1 FBgn0000617 FBtr0074463 1 1 1 80 X 17736379 17736397 AAGGAGCTGAATGTCCAGG 59 17736440 17736523 AATGCAGGTTACATAGCGGA 59 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 3 2 2 115 X 17595801 17596244 TCATGAGTTCGCAATACTCG 58 17595705 17595723 GATTAGCACCTTGATGCCT 57 NA InUTR Drosophila melanogaster 61 CG16700 FBgn0030816 FBtr0074383 3 1 1 84 X 16989588 16990326 CGCCTACAAGCTATCTGGA 59 16990374 16990392 TTGAAGGCATCTCCCATGG 59 NA Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299577,FBtr0299578 3 2 2 60 X 16917151 16917172 GGGATCAAAGTCGAGATATTGG 58 16917192 16917211 TGAAGCCTGAAACTCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474,FBtr0074335 1 2 2 80 X 16701978 16702062 ACCGAATTCTTGTCTAATACGG 58 16702102 16702121 GAAGAAGATCTCGATCACCG 58 NA Drosophila melanogaster 61 CG9906 FBgn0030755 FBtr0074299 3 1 1 60 X 16418556 16418574 CCATCTCTACCAGCTGGTG 59 16418514 16418534 CTTGTGGTCTAAGCGAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951,FBtr0299950 1 2 3 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8928 FBgn0030711 FBtr0074132 2 1 1 80 X 15839295 15839315 CCTTGTGTACTTGAACAGCAC 59 15839355 15839443 TGCATCACAGCATGATTTGAG 59 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112,FBtr0074113 1 2 2 60 X 15763127 15763148 TGAAATTAAGGCCAAGGTTCAG 59 15763167 15763187 GTATCCCAGGATACCCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL3 FBgn0030686 FBtr0074090 3 1 1 60 X 15655359 15655380 ATATAAGTATGATGCGGAGCGT 59 15655401 15655478 CTATTTCCACTGAGCCGGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15643 FBgn0030654 FBtr0074072 1 1 1 62 X 15465609 15465627 CATCTACGGATTCGGACAC 57 15465487 15465505 TACTCGTCATAGTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 hiw FBgn0030600 FBtr0073970 1 1 1 80 X 14951059 14951142 AAGACGATATTGCTCATTCCC 58 14950999 14951017 GGCAGTACAACTACCATCC 57 NA Drosophila melanogaster 61 CG32591 FBgn0052591 FBtr0073973 1 1 1 60 X 14821992 14822013 ACCATCAAGTCGAACATTACTG 58 14821953 14821972 CTTGAGATCTCTTCGAAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13404 FBgn0030559 FBtr0299543 1 1 1 118 X 14160057 14160135 CCAGGAGCTCAAGATGGAG 59 14159957 14159975 TCAGGTAGAATCCGCTCAG 58 NA Drosophila melanogaster 61 CG13403 FBgn0030544 FBtr0073928 1 1 1 80 X 14085958 14085979 ATACACAGCTACAGGAATTCCA 59 14085745 14085917 CGGTTACGGAGTTCATTGC 59 NA Drosophila melanogaster 61 CG11585 FBgn0030543 FBtr0114508 3 1 1 81 X 14083594 14083689 ATAAAGATGCACTCCTTTGCC 59 14083729 14083750 GCAGATAGGTGTTACTCAATGG 59 NA InUTR Drosophila melanogaster 61 CG12481 FBgn0030542 FBtr0100281 2 1 1 60 X 14081464 14081482 TTATCACTTCGTCACCGAG 57 14081503 14081524 CGGTTTGATGTAATAGTTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2691 FBgn0030504 FBtr0073848 2 1 1 80 X 13514879 13514965 GAGGCAATTATGCGTTCCT 58 13514817 13514838 CTTAAGCAAATAACCGATCTGG 57 NA Drosophila melanogaster 61 CG32633 FBgn0052633 FBtr0073800 1 1 1 218 X 13455749 13456015 AGACCACAGATGGATGCAC 59 13456197 13456215 TAGTTGTAGCCGGAAAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12725 FBgn0030483 FBtr0073788 3 1 1 60 X 13296384 13296404 GCATAGATCTGGAAAGTGACG 59 13296344 13296364 AAATCGAGTTCAGTCAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dmrt11E FBgn0030477 FBtr0073768 3 1 1 107 X 13263265 13264043 CCATGGAAGAATACAAACAGC 57 13264112 13264130 CCTCCATGACATGGTTCAG 57 NA Drosophila melanogaster 61 CG1622 FBgn0030468 FBtr0073757 2 1 1 84 X 13192777 13192797 CTTTACGACTGGTATGAGGAC 58 13192843 13192944 GTCCGATGGTTAAGACCTG 57 NA Drosophila melanogaster 61 REG FBgn0029133 FBtr0073730 3 1 1 135 X 13106870 13106888 GGATGTCATCGTCTCTGGG 59 13106982 13107202 CTTAAGTAGATTGGAATCCTCCAC 58 NA Drosophila melanogaster 61 rad FBgn0261379 FBtr0302269 2 1 1 81 X 12928192 12928281 ACGTCTGTCGTTATCGTGG 59 12928326 12928344 GTTGTTTCCACGGTCATGG 59 NA Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073687 2 1 2 82 X 12639827 12639847 TGAGCTTTATTGTGAAGCGAG 59 12639890 12640910 GTCAACATCTTCGGTCTCCA 59 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568,FBtr0073567 2 2 2 108 X 11763679 11763778 GGTACATAAGTCGCTCTGC 58 11763850 11763868 GTTCTGCAATGTCATTCCG 57 NA Drosophila melanogaster 61 CG32662 FBgn0052662 FBtr0073564 1 1 1 60 X 11726220 11726243 ACCTCTACATCGAATAACTCATCC 60 11726262 11726280 TTACGGGTTCCTCCATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15317 FBgn0030137 FBtr0071371 1 1 1 94 X 9450137 9450215 GACAGCATATCGAAACTGGT 58 9450062 9450081 TGCTGCTCATTACATAGGTG 57 NA Drosophila melanogaster 61 CG32703 FBgn0052703 FBtr0071329 1 1 1 80 X 9158479 9158499 ATGCTGACTGATTATGTTGCC 59 9158346 9158438 GATTCCCTTGGTGTAGTTGC 59 NA Drosophila melanogaster 61 CG12121 FBgn0030109 FBtr0071334 3 1 1 80 X 9125796 9125877 AGCAGTCTACAGATTTGATGG 57 9125736 9125756 TTTGATGCGAGTCCAAATAGG 58 NA Drosophila melanogaster 61 CG10777 FBgn0029979 FBtr0071132 3 1 1 107 X 7822582 7822837 CCAAGATCAAGGTGGAGGA 58 7822493 7822512 CCTTTAGCACTGAATCACGC 59 NA Drosophila melanogaster 61 CG1444 FBgn0029975 FBtr0071091 2 1 1 116 X 7805124 7805142 TCTACCCGGCATGATTAGC 59 7805222 7805298 TTGTTCACAAAGGCCTTGG 58 NA Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140,FBtr0300899,FBtr0071141,FBtr0300900 3 4 4 117 X 7787304 7787322 ACTGGATAAGCGAGCACTG 59 7787205 7787224 GTATAGGGCACTCTTGTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32719 FBgn0052719 FBtr0071083 1 1 1 80 X 7405679 7405762 GGATGAAGAAGATCTAAACGAACC 59 7405622 7405643 ATTTCAAGGAACGATATGTCGC 59 NA Drosophila melanogaster 61 Atg5 FBgn0029943 FBtr0071065 2 1 1 80 X 7216638 7216656 GCTAATGGAACCGTATGGC 58 7216492 7216595 GTGTACGTGAAGTCATCGTC 58 NA Drosophila melanogaster 61 CG4557 FBgn0029912 FBtr0070994 2 1 1 120 X 6739096 6739114 AGCATTGTGATAATCGCCA 57 6739198 6739284 TGGTGGAGTCATTCAAGTG 57 NA Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 1 2 2 84 X 6715183 6715256 ATTCCAGCCTACCATTCCA 58 6715304 6715322 CATACCACTGATTCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 iav FBgn0086693 FBtr0070969 3 1 1 81 X 6710421 6710502 CACACTGGGTGATTATAACTATCC 58 6710539 6710560 CATAAAGATGACAAACACGGTC 58 NA Drosophila melanogaster 61 CG14440 FBgn0029894 FBtr0070987 1 1 1 71 X 6592179 6592200 AGTATCTCAGCTATGAGAGTCC 58 6592129 6592148 TGTTGTACTCTAAGAGGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ctr1A FBgn0062413 FBtr0070951 2 1 1 100 X 6559632 6559651 TGGAATATCGACCTGTGACG 59 6559714 6560895 CAGCATCGAAGGTTGAACG 59 NA Drosophila melanogaster 61 CG6067 FBgn0029828 FBtr0070864 1 1 1 143 X 5849897 5851093 AATGCAAACGACCTACACC 58 5851200 5851218 AACAGTCGTATGGATGCCT 58 NA Drosophila melanogaster 61 CG32755 FBgn0052755 FBtr0070862 1 1 1 132 X 5844899 5844917 ACTGCTCTTTCTCAACGGA 59 5845012 5845086 TTTCTCCTTCATGGTGACCT 58 NA Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 1 2 2 83 X 5549754 5549772 CTATTGGTCGTCATGGGCA 59 5549631 5549712 ATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 CG34435 FBgn0085464 FBtr0112736 1 1 1 82 X 5508296 5508316 TGTTCGTGGTCAATGAATGTG 59 5508175 5508193 TATCCCGATGCCAAGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 1 3 3 81 X 4345063 4372194 TGTAAGTACTACGATCCTGAACTC 59 4372233 4372252 CAGCTTCAGGATGTCATTGG 59 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 1 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific Drosophila melanogaster 61 Gas8 FBgn0029667 FBtr0070589 3 1 1 136 X 3386465 3386560 CAATGAGAAACTGCTAGAGCA 58 3386349 3386369 CCTCTACCTCGAACATTTGTG 58 NA Drosophila melanogaster 61 CG16781 FBgn0029661 FBtr0070530 2 1 1 81 X 3357852 3357932 CAGCCGCGTTATCATATGG 58 3357789 3357807 CATCAGCATTCGACAGCTC 59 NA Drosophila melanogaster 61 CG10260 FBgn0040335 FBtr0070443 2 1 1 87 X 2526236 2526254 GTATTTGGCACGATTCCGT 58 2526304 2526385 CTGGGAGTTCGGATTATTGG 58 NA Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428,FBtr0070427 1 2 2 96 X 2053588 2053666 GCGAGATCAATGGAAAGCT 58 2053510 2053529 ATATTGGGCTCGCTAAAGAG 57 NA Drosophila melanogaster 61 east FBgn0010110 FBtr0070326 2 1 1 96 X 1912037 1912748 GAACGAAGATTCGTCCCAC 58 1912807 1912826 CGGAATGAGGATCTTCTCCT 58 NA Drosophila melanogaster 61 CG14817 FBgn0026089 FBtr0070365 1 1 1 120 X 1770937 1771012 ATCTCACCATGGAGCAGTC 59 1770835 1770853 TCCTCGATGGTAACGTGTG 59 NA Drosophila melanogaster 61 CG14778 FBgn0029580 FBtr0070254 3 1 1 86 X 1364120 1364198 GATGGGTCAAGATTTCCAGC 59 1364247 1364265 TGTACGAGATCGTCTCCAC 58 NA Drosophila melanogaster 61 CG11398 FBgn0040366 FBtr0070250 2 1 1 117 X 1109020 1109040 GTCCTTAAACACAGAAGAGCT 58 1108773 1108791 CTCCCTGGTGAGGAATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 1 3 3 154 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654820 654839 GATTATGCGATCCTGACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 3 2 4 181 X 516160 516242 CCAGGTGGAGATTATATCAAGAG 58 516382 516488 AAGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107 3 1 2 81 X 139601 139721 ACGTAGAATGGATTCAAGCC 58 139539 139559 GTTAGATGGATTCCTCTTCGT 57 NA InUTR Drosophila melanogaster 61 CR40507 FBgn0085739 FBtr0114189 1 1 1 63 U 9672317 9672335 AGTAGCCAAACACCTCGTC 59 9672362 9672380 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40959 FBgn0085777 FBtr0114228 2 1 1 60 U 5914142 5914162 TGGGATTGTGAACTGAAACTG 58 5914182 5914202 TAATGACTCACACTTACTGGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42440 FBgn0259871 FBtr0300169 3 1 1 83 U 9697117 9697135 ATACATCAGTTCGGAGCGT 58 9697052 9697070 CAGGAGATATTCGGACACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42425 FBgn0259856 FBtr0300153 3 1 1 62 U 7785459 7785479 AGAAAGCAGGAATGTTTGTCC 59 7785503 7785521 CAACGCACTACGGAATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41561 FBgn0085692 FBtr0114141 3 1 1 80 U 4051908 4051928 ATTTGGTCGATTCGTAAGACC 58 4051790 4051866 CAGCACGGAATACATTTGC 57 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 2 1 3 93 4 996100 996121 CCGAGAGTACTATTAATGCGAG 58 996175 997396 ACACAAGATGGAGAAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 3 2 2 81 4 803971 803990 CGTCAACAAATCGAGATCTG 57 803853 803930 GGAGAATTCATTGAAGTGTCTG 57 NA Drosophila melanogaster 61 Thd1 FBgn0026869 FBtr0089106 2 1 1 82 4 570234 570347 TCGTTATAGTCGGGATAAATCC 57 570173 570191 CTTCCAGAAGTGATTGCCT 57 NA Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 2 2 3 60 3R 17123343 17123362 TAACTGGTGTTTATCAGCGG 58 17123385 17123403 TCAATAGAAGCGACAGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-3 FBgn0084245 FBtr0113490 1 1 1 65 3R 12589380 12589398 AGAACACGGGAGAAGAAGC 59 12589333 12589351 TTTGAGTGGAAGTTCGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342,FBtr0083341 1 2 4 86 3R 12579511 12598586 AGAACAACATAGCACTCACAC 58 12579445 12579468 CCTCTGGAGTTGTGTAATATTTGG 59 NA Drosophila melanogaster 61 CR33328 FBgn0053328 FBtr0082858 3 1 1 60 3R 9464672 9464693 TATCCATCTACTATCCACCGAC 58 9464633 9464651 TTGGTTGCTTGATTGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11576 FBgn0039882 FBtr0085852 2 1 1 172 3R 27635454 27635472 ACTCCGAATATGAGCAGGT 58 27634138 27634157 TTAAGGAACAAGCTCAGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11576 FBgn0039882 FBtr0085852 1 1 1 171 3R 27635454 27635472 ACTCCGAATATGAGCAGGT 58 27634139 27634157 TAAGGAACAAGCTCAGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 3 4 4 115 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 pasha FBgn0039861 FBtr0085820 3 1 1 100 3R 27444481 27444970 TGATGAGTCAGACAACGCT 59 27445034 27445052 AATCGTATTCTTCGCCGTC 58 NA Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721,FBtr0085722 2 2 2 60 3R 26571926 26571944 TCTGGTGTTGTCATCCGTC 59 26571884 26571904 CACACTATCTTCGCAAGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 3 2 2 82 3R 26332230 26332251 ATTCAGTGGACTTATTCACTGC 58 26332293 26332365 CCATCCAGCGATGTATTGTG 59 NA Drosophila melanogaster 61 CG2224 FBgn0039773 FBtr0085691 2 1 1 80 3R 26283112 26283192 GGATTCATACTCATCCAACTCAG 58 26283054 26283075 GCATCATAATCTGATAGGAGCA 58 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746,FBtr0089747 2 2 2 61 3R 25999318 25999337 TCTTCTCTGTGTTCTCCCAG 58 25999117 25999294 ATCCATGAGTTGGAAGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597,FBtr0085565 3 2 2 80 3R 25893716 25893734 ATTCCGTTGGGAACTAGCA 59 25893776 25894045 GTCATGCATCTTGTCATCCAC 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085597 2 1 3 117 3R 25865120 25865208 AAATTTGCCGGACTACGAC 58 25865021 25865042 CATCGAAGACATTGATCATGAC 57 NA InUTR Drosophila melanogaster 61 CG7920 FBgn0039737 FBtr0085603 3 1 1 116 3R 25837480 25837498 ATGTGTCCTTCATCCACGT 59 25837321 25837401 TGATTTGAGCCACAATGAGC 59 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 2 2 2 80 3R 25777673 25777691 CGGGAGAATCTGACATCCC 59 25777547 25777631 CGATTTCTGGGTATCATTGCG 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 1 4 4 165 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 Brd8 FBgn0039654 FBtr0085394 1 1 1 60 3R 25050673 25050694 ATGACTCCAACGACAATATACC 58 25050715 25050733 CCACGATCCTTACTCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11898 FBgn0039645 FBtr0273260 2 1 1 111 3R 24995033 24995107 AAACTATATCTCGCAGTCCCA 58 24995180 24995198 TAGTAGTGGAAGTCCCGCT 59 NA Drosophila melanogaster 61 CG14528 FBgn0039611 FBtr0085329 2 1 1 60 3R 24703031 24703049 CCCAGTATCACGAGTACCA 58 24703072 24703091 TCTGACTGATCCTTGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB98a FBgn0261289 FBtr0085312 1 1 1 80 3R 24632859 24632878 ACTCTATGAGCCATGGACAG 59 24632921 24632992 AGAATGAGCTTCGTCCCTG 59 NA Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220 3 1 2 104 3R 23526215 23526235 CTAGAGTAGTTAGGCCTTGTC 57 23526374 23526392 GTTGGTTTCTCCACTTCGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ALiX FBgn0086346 FBtr0085241 1 1 1 80 3R 23525542 23525560 TCGAAACAACGCAATACGG 59 23525266 23525503 GTCATAATAGGCGTACACAATCTC 59 NA Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 1 1 1 133 3R 23516580 23517465 AGGTCTCGTTTCCCTTCAG 59 23517562 23517580 CAGCAGTCTATTGCGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 1 1 2 97 3R 23484261 23484339 TGGTGAGAGCTTGGATGAC 59 23483827 23484200 GGACGAACTGAGAGTAGGG 58 NA Drosophila melanogaster 61 CG5646 FBgn0039525 FBtr0085210 2 1 1 109 3R 23386077 23386095 TACCACAACATGTTCCTGG 57 23385927 23386006 TCACTGTAATAAGTGGCTGTC 57 NA Drosophila melanogaster 61 CG14259 FBgn0039483 FBtr0085104 1 1 1 84 3R 22920798 22920940 TCAAGGAGAGTCGTGTGAG 58 22920986 22921006 TCATACCTTCCATCCAGTCTC 58 NA Drosophila melanogaster 61 CG6277 FBgn0039475 FBtr0085150 3 1 1 192 3R 22848873 22848891 TTGGCATTCTTTGCTCTGG 58 22848637 22848655 AGAACTTTACGGGAACGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6277 FBgn0039475 FBtr0085150 1 1 1 191 3R 22848873 22848891 TTGGCATTCTTTGCTCTGG 58 22848638 22848656 GAACTTTACGGGAACGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 beat-VII FBgn0250908 FBtr0290328 2 1 1 103 3R 22492577 22492595 TGGTGAATCTAGTGGTGCC 59 22489407 22492512 CAGCCATGTAACCTTGAACAG 59 NA Drosophila melanogaster 61 CG5432 FBgn0039425 FBtr0085006 3 1 1 61 3R 22240600 22240618 TGGAGTGGCTACAGTTCTC 58 22240643 22240720 AAAGTACTCCCATTACGGC 57 NA DesignRelaxed Drosophila melanogaster 61 Dak1 FBgn0028833 FBtr0299798 1 1 2 82 3R 21882158 21882176 AAATCGATGTCAGCGATGG 58 21882034 21882112 TTCCAGAACCTTCTGAGCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5948 FBgn0039386 FBtr0084939 2 1 1 86 3R 21721855 21722211 ACACCTATCAGTTGGTGCC 59 21722261 21722279 AGGATATCATTCCGGCCAC 59 NA Drosophila melanogaster 61 And FBgn0011273 FBtr0084904 3 1 2 129 3R 21638785 21638806 ATTCGTATGGATGATAAGCCAG 58 21638896 21638914 GTTAGACCGCAGAGAAGTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986,FBtr0089983 2 6 6 80 3R 21182168 21182186 AGACGAGGAGACATTCAGC 59 21182052 21182125 GTTGTCATGTATCCTAGGCG 58 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113351 3 1 5 136 3R 21151117 21151140 CACATAAGCTACTGAAGTCATACC 59 21149456 21149474 CAAGTCCTGAGCAACAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13631 FBgn0040600 FBtr0084693 2 1 1 124 3R 20595283 20595301 AACTACGTCTCGTACACCA 58 20595389 20595407 GTACCGAACATCACCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb10 FBgn0039218 FBtr0084688 1 1 1 86 3R 20543423 20543524 ATACACCGAAGGAGATGCC 59 20543574 20543592 TCGATAAGATCCACGTGGC 59 NA Drosophila melanogaster 61 CG5762 FBgn0039190 FBtr0084627 2 1 1 81 3R 20186908 20186926 ACGAAATCGTAGACGGGAC 59 20186787 20186863 ACTCGGTCTTTCTTCCTGG 59 NA Drosophila melanogaster 61 CG6178 FBgn0039156 FBtr0084550 3 1 1 110 3R 19979389 19979409 GAGGACGTGTCTCTTATTGTG 58 19979481 19979555 AGTGGGTTGGATTTGTGAG 57 NA Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 1 3 3 81 3R 19591779 19591860 ACATACCCAGAAACCTGGC 59 19591904 19591923 GAGATTGTGATGATGCGGTG 59 NA Drosophila melanogaster 61 klg FBgn0017590 FBtr0084337 1 1 1 80 3R 18774541 18778731 GGAGAATCTGGGCAATTTCG 59 18778771 18778792 TCCCTTGTAACCATAATGTTGG 58 NA Drosophila melanogaster 61 CG17141 FBgn0039020 FBtr0084322 1 1 1 92 3R 18573105 18573127 TAGACTGCATAGTCGAGATTCAC 59 18572980 18573054 GTTTAACACCACTTCCGGTG 59 NA Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084291,FBtr0084290 1 2 2 62 3R 18315647 18315665 TCATCAAGGGCACTAAGGC 59 18315540 18315558 AGAAGTCATTGGGACCACG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir94a FBgn0051164 FBtr0084193 1 1 1 60 3R 17940654 17940673 TGCGATATTTAGCCATCACC 58 17940696 17940714 GATCATACCCGAATCAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0084138 2 1 2 81 3R 17699903 17699923 GTACCGTTATGGGATACTACG 57 17699966 17700050 GCATTGCTATTCGCATCAC 57 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 2 2 2 80 3R 17585747 17585821 TGGCTCATCAGCTCTATCC 58 17585863 17585883 CATCCGTTCCAAATATCAGCT 58 NA Drosophila melanogaster 61 CG7009 FBgn0038861 FBtr0084029 1 1 1 82 3R 16958661 16958734 CACATACGATTTGGGCGAG 59 16958597 16958617 TCTGCAGAATGTCCTGATAGG 59 NA Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 3 2 2 129 3R 16384799 16384817 CAAATGGTAGCCCATGCAG 59 16384907 16384992 GATTGACCGCTTGTTGTATCTC 59 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083843,FBtr0083842 1 2 2 85 3R 15845001 15845020 GACTCGATCAATGTGGTCAG 58 15844874 15844953 TTCAGTATGCACCAATGCG 58 NA Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 1 1 1 60 3R 15742695 15742770 TATTTGGTGACATAACAGCGG 58 15742655 15742675 AAGCAGTCGTAAAGTATGAGG 57 NA DesignNoJunction Drosophila melanogaster 61 ort FBgn0003011 FBtr0083784 3 1 1 93 3R 15488647 15488771 ATAGAAGGATTGTAACCACCAC 58 15488825 15488843 AGTATTATCCGCGACTCCT 57 NA Drosophila melanogaster 61 cry FBgn0025680 FBtr0083736 2 1 1 80 3R 15040612 15040868 CCCAAGGAATTTGTTCACGAG 59 15040909 15040928 ATAATGGACTCCGATCAGGC 59 NA Drosophila melanogaster 61 CG31475 FBgn0051475 FBtr0083735 1 1 1 117 3R 15026320 15026340 GCTACTGAACTATGTGAACCC 58 15026417 15026508 ATCAGTCATCTCTTTGAGGGT 58 NA Drosophila melanogaster 61 CG6040 FBgn0038679 FBtr0083729 3 1 1 84 3R 14955610 14955628 AGCTATTACGGTAGCGAGG 58 14955676 14955761 GGTTCTTGTTAGCCTGTGG 58 NA Drosophila melanogaster 61 gatA FBgn0260779 FBtr0083718 2 1 1 88 3R 14853897 14853916 CTTAACAAGGATCACTGGCG 59 14852918 14853849 CCAATTGCTGCATAACAAAGAC 59 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775,FBtr0083684 2 2 2 80 3R 14562183 14562264 CAAGTAGCAATGAATCCACCTC 59 14562124 14562143 TGGATCCCTTACGCATATGG 59 NA Drosophila melanogaster 61 CstF-64 FBgn0027841 FBtr0083660 2 1 1 122 3R 14485550 14485633 GTCTTGTCACTGAAACTGGTC 59 14485713 14485735 GATCTCATAGCCATTCAGATTCC 58 NA Drosophila melanogaster 61 CG8064 FBgn0038597 FBtr0083574 1 1 1 155 3R 14109600 14109682 GTGTGGGATTTGCGAATGG 59 14109801 14109819 GTAGTACCTGTCCGAGCTG 59 NA Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083618 1 1 2 60 3R 14010862 14010995 AAACACAAGTGTGATGCCG 59 14010820 14010838 CAATTCACCAATGGTCGCA 59 NA DesignRelaxed Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 2 2 2 60 3R 13992106 13992125 AATCATTTCACTGCGATCCC 58 13991871 13992084 GGAGTCTCCTACTTTCACCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DNaseII FBgn0000477 FBtr0083538 3 1 1 83 3R 13845228 13845805 GATGTAGATTGGTGGCACC 58 13845852 13845870 GTACTTCAAGCCACTGGTG 58 NA Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 2 1 1 94 3R 13559515 13559618 TGAAATCACTTACCACGAACTG 59 13559673 13559691 GGATGCAGTTGATCTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352 1 1 6 86 3R 12484779 12558421 AAGTACAAATGGTCTGCGA 57 12484711 12484729 TGATTCGTGTGGAACTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 npf FBgn0027109 FBtr0083328 2 1 1 81 3R 12436706 12436726 TGGATATCCTGAGGAATCACG 59 12436769 12436840 AAACCGCGAGCAAATTCTC 59 NA Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 3 1 1 179 3R 12303277 12304473 AGCCGGAAAGCAATATAAGG 58 12304615 12304633 CAATCTGGCAGACCTTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10405 FBgn0038431 FBtr0110773 1 1 1 83 3R 12280828 12280847 AAGCACTACGGTACTGACAG 59 12280892 12281215 CAGAACATTGCTTCGGTGAC 59 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 3 2 2 73 3R 12260779 12260857 TACGACAACCAACATCGAG 57 12260893 12260912 AGTTGATGGGATCGTATGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 2 7 13 147 3R 11122419 11125005 AAATACGATGAGGTTGCCC 57 11126515 11126533 AGACTTCCAGGGACTTCAG 58 NA Drosophila melanogaster 61 CG3817 FBgn0038275 FBtr0083003 2 1 1 61 3R 10724691 10724709 GTGCGATTCCAGAAAGACG 59 10724732 10724752 GCTTTCTCGATCTCGAAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17304 FBgn0038267 FBtr0083012 3 1 1 65 3R 10685075 10685093 AATGATCATCGAGGTGCTC 57 10685028 10685049 TACATCATTCTAGTGGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14851 FBgn0038240 FBtr0082956 1 1 1 61 3R 10388473 10388491 CAGGAATAACAACGCCAGG 58 10388516 10388534 CTACTACGCGAACGTTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9624 FBgn0038213 FBtr0082897 1 1 1 60 3R 10054112 10054130 AGGTGCTCAATGTCTTCCA 59 10054070 10054088 TCGTGCCATGAGTTATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283,FBtr0301351 2 2 2 83 3R 10030022 10030040 GTTAGCGATTGCGGATCTC 58 10017575 10029977 CCAAAGATCCAATATCCCAGC 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273374,FBtr0082885 1 2 5 90 3R 9902249 9905080 CAGCAATGAACTCCATACGTC 59 9905132 9905150 ATCCACCAGGATGACTTGC 59 NA Drosophila melanogaster 61 omd FBgn0038168 FBtr0082848 3 1 1 81 3R 9506053 9506071 GCTTTGCTATTCCTCCGTG 59 9505926 9506010 GAATCGATTGACATTCTTGCC 58 NA Drosophila melanogaster 61 omd FBgn0038168 FBtr0082848 1 1 1 80 3R 9506053 9506071 GCTTTGCTATTCCTCCGTG 59 9505927 9506011 AATCGATTGACATTCTTGCCC 59 NA Drosophila melanogaster 61 CG8483 FBgn0038126 FBtr0082782 2 1 1 122 3R 9036041 9036629 CCGTACAATAAATCGCTTTACG 58 9035940 9035958 TTCTGCACCTCGTTAAACC 58 NA Drosophila melanogaster 61 CG7966 FBgn0038115 FBtr0082715 3 1 1 80 3R 8875355 8875445 ATGGGATAAGCAGTTCTATCCA 58 8875296 8875314 CCTCCATTCACAGTGTCCA 59 NA Drosophila melanogaster 61 CG33929 FBgn0053929 FBtr0091933 2 1 1 101 3R 8720015 8720036 CCGAACATATAAATACGCGTCC 59 8719863 8719955 GCAACTGGATATCCTTTCCAG 58 NA Drosophila melanogaster 61 CG18530 FBgn0042207 FBtr0082644 3 1 1 81 3R 8459136 8459217 TAACTTCTGCCGAAATCATAGC 59 8459256 8459277 TTGAGTAAATACCCATCTCGTG 58 NA Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 2 2 2 80 3R 8378964 8379504 CCTTTCTTCCTGTGGTACAC 58 8378903 8378922 CCAGAAGAGGATTGAGACGA 59 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272,FBtr0082485 3 2 2 66 3R 7797714 7797733 CAATAGGTCCCAATGGAGAG 57 7797833 7797851 CTGGCGATAGTCTTTCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082392 1 1 2 106 3R 7263812 7289757 TACGGTACAGGAGGAAGGA 59 7289827 7289845 TTGTGTTCCTGTTCCATGC 58 NA InUTR Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 1 1 1 64 3R 7000612 7000862 GAGTTTGAGGAATCCGTTGG 59 7000567 7000590 GACATAGAACTAATTTCCTCCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Dc FBgn0040257 FBtr0082337 3 1 1 91 3R 6980538 6980556 TTTGGTATCGCCATTTCCC 58 6980611 6980922 CTTTGTAAACGCCCATCAC 57 NA Drosophila melanogaster 61 CG4073 FBgn0037827 FBtr0082269 1 1 1 60 3R 6541103 6541124 GTGATATTTGTGAATTGCCACC 58 6541145 6541163 GGACACCAGTCATCCAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34108 FBgn0083944 FBtr0110788 2 1 1 68 3R 6051479 6051553 AGTGAAACCAAGAAGCTACTC 58 6051583 6051601 TTTGGCCAACACTTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 CG6208 FBgn0037789 FBtr0082195 3 1 1 60 3R 5947032 5947050 TAGGACAGACGGATAGTGC 58 5946990 5947010 GCTGCCTTGAAATACATACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art4 FBgn0037770 FBtr0082150 1 1 1 89 3R 5810183 5810256 CTGCATTTGATAAGCATCCC 57 5810113 5810132 GCTAAACTCCACATCAAACC 57 NA Drosophila melanogaster 61 CG8417 FBgn0037744 FBtr0082131 2 1 1 111 3R 5586105 5586123 CGGAAAGCGTTAAGTTGTG 57 5586198 5586269 TCGTTGGATTTCAGTTCGT 57 NA Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 1 2 2 80 3R 5575745 5575767 TAAGGATATGGGCTATGAAGTGG 59 5575803 5575881 CCCATAGTATCACAATAGTTCGG 58 NA Drosophila melanogaster 61 eca FBgn0069242 FBtr0082098 2 1 1 82 3R 5511015 5511033 CCACATATCGGAGACGGAG 59 5510889 5510975 GCTCTACCTTGTAGTTAACAATCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG16749 FBgn0037678 FBtr0082057 3 1 1 111 3R 5157552 5157570 TATTCGCCCTCTTGACCAC 59 5157394 5157477 CGCATCGAAATCACGAAGG 59 NA Drosophila melanogaster 61 CG16749 FBgn0037678 FBtr0082057 1 1 1 110 3R 5157552 5157570 TATTCGCCCTCTTGACCAC 59 5157395 5157478 GCATCGAAATCACGAAGGG 59 NA Drosophila melanogaster 61 CG18005 FBgn0037660 FBtr0081995 1 1 1 124 3R 4889160 4889178 ACGGAGAAGAACGAGAAGG 59 4888989 4889007 TTGTAATCGGGTTCATCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31100 FBgn0051100 FBtr0082011 1 1 1 91 3R 4825232 4825254 CCATTAACCTGATATGTGTACCC 58 4824821 4825181 GTTGACAAACTGCATGGCT 59 NA Drosophila melanogaster 61 CG11966 FBgn0037645 FBtr0082014 2 1 1 233 3R 4788146 4788165 AAACCACTATCCACTACGGA 58 4779569 4779587 TCATTGTCAGTGGACCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 1 4 4 109 3R 4547248 4547266 CTCAAGCCATCTCCATGGA 59 4547408 4547426 GAGTCGAATGTCTCCTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 3 1 1 282 3R 4169504 4169577 AACTGTTTCTCTTTGCGCC 59 4169823 4169841 ATACATCGCCACCTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807,FBtr0100368 1 2 2 81 3R 4063877 4063896 GCATACCTCCAATGGAAGTC 58 4063748 4063835 TGACATTTCGACCTTTCTGAG 58 NA Drosophila melanogaster 61 CG7900 FBgn0037548 FBtr0113204 3 1 1 83 3R 3919983 3920001 CACCAATTAGGAGTCGCCT 59 3920048 3925761 ACTCCACCGATGTTAGCTG 59 NA Drosophila melanogaster 61 CG14463 FBgn0037535 FBtr0081783 2 1 1 119 3R 3826125 3826143 CACTCCAAATGGAGACGGT 59 3826223 3826326 GCATGTACTTTACGTCCAAGTC 59 NA Drosophila melanogaster 61 mRpS9 FBgn0037529 FBtr0081766 1 1 1 86 3R 3728020 3728038 GAGTTCCAGATCGGAAAGC 58 3727894 3727970 TATCGCCTCGTCTATGTCC 58 NA Drosophila melanogaster 61 alpha-Est2 FBgn0015570 FBtr0081540 3 1 1 81 3R 3369214 3369621 TGGCAGCACTAGGATTTCTC 59 3369662 3369683 GCCATTACTTGGTCCTTAAGTC 59 NA Drosophila melanogaster 61 Ccp84Af FBgn0004778 FBtr0081695 1 1 1 237 3R 2515829 2515905 GCCTTCAAGTTCTTCGCTG 59 2515610 2515628 CAACCTGACTCTTCGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG15177 FBgn0037461 FBtr0081700 1 1 1 102 3R 2454625 2454643 TACCAAGTACGTGAGTCCC 58 2454486 2454561 GGTGTCATAAACTTCAAAGGC 57 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 2 5 5 117 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216706 2216724 TGGAACTGGTGATTCTGCA 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 1 2 2 87 3R 2199081 2199099 AACGTCTGAGCGAATCCTC 59 2198947 2199033 GGAGTTCTTGGTCAAATTCCAC 59 NA Drosophila melanogaster 61 CG18048 FBgn0037435 FBtr0081712 2 1 1 60 3R 2172505 2172523 GTTGATGGATCACACGAGC 59 2172547 2172565 AAAGTAGGCCAATTGTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or83c FBgn0037399 FBtr0078620 2 1 1 81 3R 1903366 1903463 GTACATGATTCAGACGGTGAC 58 1903305 1903324 CGTTAAGCCGAGAAATACGA 58 NA Drosophila melanogaster 61 disp FBgn0029088 FBtr0078665 2 1 1 85 3R 1680115 1680133 GCAAGCGGCTAAATATCGT 58 1679917 1680072 CAGGTATACATTCGAGTCATTAGAC 59 NA Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730,FBtr0078731 3 2 2 91 3R 1483648 1483875 CTGCCGTACAAAGATTGAGC 59 1483576 1483594 TATGAGCGTACAACTGGGC 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078755,FBtr0078757 3 4 4 89 3R 1385035 1385113 CCTTCCTCTAAAGACTGGCT 58 1384965 1384983 AAGGGTTCGCTTTCAAAGC 59 NA Drosophila melanogaster 61 Pcmt FBgn0086768 FBtr0078758 1 1 1 80 3R 1378763 1379008 TCAGTACATGCAACAGTACGA 59 1378703 1378721 AGAGGGACGTACATTACGC 59 NA Drosophila melanogaster 61 CG12147 FBgn0037325 FBtr0078793 1 1 1 60 3R 1252740 1252759 ACAAGATCGTCGGTTCTCAG 59 1252699 1252720 CTTTCCCGCCACTATAATTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 1 14 19 80 3R 1121919 1121938 GAAGAAGACTCCAAGGAGCT 59 1121675 1121878 CCCTATTTCTGCATCTAAGCG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 CG14655 FBgn0037275 FBtr0078881 2 1 1 84 3R 604264 604283 AACCACCAGAGGATTCACAG 59 604029 604047 CAAGGAAAGAGACTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078956,FBtr0078955 2 2 2 106 3R 155847 155865 AAGAAAGACGAGGACAAGG 57 155694 155715 GCATCTATTGTACTACGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Me28S-A576 FBgn0086080 FBtr0114356 2 1 1 61 3L 17559216 17559235 TTAATTGGAACAGCAACGGC 59 17559174 17559195 GCTTCAATCACCAGAATAATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32477 FBgn0052477 FBtr0072500 1 1 1 85 3L 227446 227522 GCGTTTGAGAAATGACGCT 59 227568 227589 GTGATTGATAAGACTGGTTGCT 58 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0078581 2 2 3 75 3L 22794835 22825049 GCCTGTCAATTTGTTGAACC 58 22794779 22794799 CCTTTGTTGGCTTACAATTGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 2 2 2 80 3L 21819504 21819583 ATTAGCAATGGGTTCAAGGT 57 21819626 21819644 CAACAATTCCTGACCCTGG 58 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 3 2 2 90 3L 21605208 21605226 ACCATAGCCGAAGTACAGC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 SAK FBgn0026371 FBtr0078387 2 1 1 80 3L 21506446 21506547 ATAGCTACTGAGCTCTCCCA 59 21506385 21506404 TTGCATGCTCGGAATAACAG 59 NA Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0300055 2 1 2 171 3L 20955007 20955025 TATTGCACGGCAATATGGG 58 20954792 20954810 TTCTTGTACACCAAGGGAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078204 2 1 5 160 3L 20503000 20503018 TTCATTTGGAAAGCCCACG 59 20503211 20503229 ATCTTAAGAGGTTCGGCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5199 FBgn0036994 FBtr0078224 1 1 1 124 3L 20444347 20444982 GACATAAGCGCTTTGGAGC 59 20444241 20444259 TTTAGATGCATCGACGCCT 59 NA Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 1 2 2 80 3L 20439489 20439854 AAATTTAACGGCTCAAGAGGTC 59 20439894 20439913 GCCTAGGCAATACTTTGGTG 59 NA Drosophila melanogaster 61 RhoBTB FBgn0036980 FBtr0078185 3 1 1 86 3L 20373746 20373827 CCAATGTGATCGTATTCCCTG 58 20373875 20373893 AGATTGGCGGAATCTGGTC 59 NA Drosophila melanogaster 61 kin17 FBgn0024887 FBtr0078181 1 1 1 80 3L 20350899 20350921 GGACGTAATTGACAGATATCAGG 58 20350960 20351051 TCCAAATGAGCTTGATCCAC 58 NA Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 1 2 2 80 3L 20305702 20305789 TTCTGTGCAGCTAAACTTCTC 58 20305827 20305849 TCCTGGTCCATATAGGTTATAGC 58 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0301126,FBtr0300813,FBtr0074830 3 3 3 70 3L 20236278 20236296 AAAGGAGGAACTCCGACAG 59 20236329 20236348 ATATGGACTCGCCAATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Clc FBgn0024814 FBtr0301126,FBtr0300813,FBtr0074830 1 3 3 69 3L 20236278 20236296 AAAGGAGGAACTCCGACAG 59 20236329 20236347 TATGGACTCGCCAATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gig FBgn0005198 FBtr0074819 1 1 1 80 3L 20128391 20128412 CTCCAAATGAGTAAGATGTCGG 59 20128452 20128537 GGACAGATGTATGAGCAACG 58 NA Drosophila melanogaster 61 CG14187 FBgn0036938 FBtr0074868 2 1 1 112 3L 20105761 20105870 TCTTGTTGGTTTCACAGCT 57 20105667 20105685 ATAATCCACAGGTCGTCCA 58 NA Drosophila melanogaster 61 RhoGDI FBgn0036921 FBtr0074896 3 1 1 109 3L 19924107 19924201 TATTGTTGAACCCAATGATCCC 58 19924271 19924289 TCAGCTGACTAAGGTCACC 58 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 3 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG9392 FBgn0036895 FBtr0074948 2 1 1 101 3L 19613783 19613864 CGAGCAATACGTATCTCAGC 58 19613928 19613946 AGAACTTCCAGTGATCGCA 59 NA Drosophila melanogaster 61 CG32210 FBgn0052210 FBtr0074974 2 1 1 80 3L 19540937 19540961 GAGGCCTTACTAGAACAAATAACAC 59 19540814 19540902 ACTATTTGACTTGCAGAACGAG 59 NA Drosophila melanogaster 61 Cpr76Ba FBgn0036878 FBtr0074977 2 1 1 60 3L 19511347 19511366 CAATTGAGCATCCTCTGCTG 59 19511306 19511325 CATGAGGGATGTAGCTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14087 FBgn0036868 FBtr0074996 3 1 1 90 3L 19380791 19380811 GAACAACCGTAAGAGGAAGAG 58 19380863 19381033 GTCACGTCTACTGGAGGAG 58 NA Drosophila melanogaster 61 CG14087 FBgn0036868 FBtr0074996 2 1 1 81 3L 19380800 19380820 TAAGAGGAAGAGCACAGACAC 59 19380863 19381033 GTCACGTCTACTGGAGGAG 58 NA Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075057,FBtr0075056 3 2 2 64 3L 18814735 18814753 GTGCCTCATACAGTGAGGG 59 18814781 18814799 TAAGCTTCTGTGGGAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151,FBtr0075148,FBtr0075150,FBtr0075149 1 4 4 110 3L 17948397 17948415 GATGGATATCGTTGGCTCG 58 17948140 17948324 TTGAGTATTCCGATCTGCTG 57 NA Drosophila melanogaster 61 CG7402 FBgn0036768 FBtr0075143 2 1 1 80 3L 17882491 17882510 ATACTCAGCCTGGCATATGG 59 17882553 17882635 GTTCATGCCCATGTCATCG 59 NA Drosophila melanogaster 61 CG5506 FBgn0036766 FBtr0075157 3 1 1 95 3L 17877302 17877389 CTCGACTTATGATACCGAGCA 59 17877227 17877245 AATCCGTAGGGATCGAAGC 59 NA Drosophila melanogaster 61 CG34250 FBgn0085279 FBtr0112444 2 1 1 60 3L 17469401 17469421 TAGTGCATTAATGGACTGCTG 58 17469440 17469461 TAGCATGTTGTGGATACTTTCG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Su(P) FBgn0004465 FBtr0075359 2 1 1 96 3L 16604060 16604078 GTCTGGCTGATCTATCGGT 58 16603920 16604000 AACCATTTACCGATGCTGG 58 NA Drosophila melanogaster 61 CG32164 FBgn0042177 FBtr0075313 1 1 1 80 3L 16597751 16597771 GAAGCAGAAACTACTACAGCC 58 16597810 16597890 TAATCATCGTCTTCCTTGAGGT 59 NA Drosophila melanogaster 61 Smn FBgn0036641 FBtr0075395 3 1 1 61 3L 16574063 16574083 CAGTATCCTTCAAAGTAGGCG 58 16574022 16574040 CTCGTAGTCCACACCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13039 FBgn0036609 FBtr0075430 3 1 1 60 3L 16319676 16319698 CGATGAATCAACTCTGGAATACC 59 16319638 16319656 CATATACTGTTCGCGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13053 FBgn0040801 FBtr0075480 1 1 1 80 3L 16252431 16252517 TATCTCTGGTTAGCAGTGCTC 59 16252371 16252389 GTAGCTGACACCGAAGGAG 59 NA Drosophila melanogaster 61 CG5027 FBgn0036579 FBtr0075457 1 1 1 110 3L 16222733 16222808 AGGAGTTCAAGGTTCGTGG 59 16222880 16222900 TCCTTAAGGCATAATCCACCA 59 NA Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 1 2 2 61 3L 16134454 16134472 CGAGTACGGACAAGATCGA 59 16134349 16134429 TGGTGATCTCCGATTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 2 4 4 89 3L 15964324 15964402 CCATTCTAGGTCGAGGCTC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0075509 1 1 2 80 3L 15948344 15948365 GCCATATACCTTCTTACGTTCC 58 15948406 15948502 AATGGCATCCCTTAGGTGG 59 NA Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 3 2 2 84 3L 15921442 15921460 TCTTCGACTATGTCTGCGG 59 15921311 15921397 GCATAGAAGTTGGAGGTTTGAC 59 NA Drosophila melanogaster 61 mRpL39 FBgn0036462 FBtr0075672 2 1 1 100 3L 14992133 14992151 GTGTTCCCTGGGATATGCA 59 14991987 14992070 CCAGAATGCTTTGTTGACCA 59 NA Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 2 2 2 80 3L 14932884 14932962 AACTCCAATGGGTCCATGG 59 14933006 14933024 AGTAGAGCAGTTCTCCGGA 59 NA Drosophila melanogaster 61 CG9592 FBgn0036426 FBtr0290282 2 1 1 60 3L 14511127 14511145 CTCGCAAGTCAACAAGGAG 58 14511167 14511187 ATGCAGTCTAACTCTAGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 1 2 2 90 3L 13994647 13994667 TCGGTTACTGTACAGGTATCC 58 13994518 13994595 ATAGGGATTGCGCTTTCTG 58 NA Drosophila melanogaster 61 Meics FBgn0025874 FBtr0075791 3 1 1 75 3L 13957233 13957251 AGGAGAGTGAACCATTGCA 59 13957071 13957092 TGAATGGATACTTCATCTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075842 1 1 3 86 3L 13375928 13376021 CATCGTAGCAGTAGCAGCT 59 13376071 13376089 TAGTGATGATCGGAGCCCT 59 NA Drosophila melanogaster 61 CG32115 FBgn0052115 FBtr0075904 3 1 1 128 3L 12906082 12906163 TATACCAGGTCGTGAAATACGT 59 12905975 12905996 TCCAAGGTACTCAATTTAGGGT 58 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 1 3 3 103 3L 12843424 12843610 GGAGAGTACATACTGCTCCAC 59 12843673 12843693 GAGGTGAGATAAATCCTGCCA 59 NA Drosophila melanogaster 61 ara FBgn0015904 FBtr0300551,FBtr0075908 3 2 2 118 3L 12587515 12587534 AAGAATCGCACAGATGACGA 59 12587615 12587695 TTGGTCTCATCTTTGGCCA 59 NA Drosophila melanogaster 61 Gap69C FBgn0020655 FBtr0075981 3 1 1 100 3L 12409089 12409382 CGACAAAGATTAAAGAGGGAACTC 59 12408937 12408957 ATTATTCCAACCTCGTTTGCC 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 3 5 5 117 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694509 11694589 GCTGTCATTTACATGCGAG 57 NA Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359 3 1 2 114 3L 11466395 11466413 TGACGAGCAAACGAATTGC 59 11466540 11466558 AAAGAAGAACGAGTACGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6149 FBgn0036158 FBtr0300274 1 1 1 60 3L 11428099 11428119 GACATCAATATCCGAAACGCA 59 11428059 11428077 TATCCCAACATGAAGGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12522 FBgn0036131 FBtr0076209 1 1 1 114 3L 11101371 11101389 TATTCTTGCGCTATCCCTG 57 11101467 11101485 AGTGGAAGAGCTACTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34239 FBgn0085268 FBtr0112433 3 1 1 83 3L 11033835 11034041 AGAATCCGCTGAAAGTGAC 57 11033770 11033788 TGAGGTCTTCCAAGGTCAG 58 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 2 4 4 115 3L 10865273 10865291 ATCAGCACAGTCCAGTTCC 59 10865369 10865455 CATTTCTTCGCTGTTGTCCA 59 NA Drosophila melanogaster 61 UbcD4 FBgn0015321 FBtr0076395 1 1 1 89 3L 9692207 9692452 AATCCACCAAAGGTACGCT 59 9692503 9692523 GTCCTTTAAGATGTCCAAGCA 58 NA Drosophila melanogaster 61 CG13309 FBgn0035933 FBtr0076582 3 1 1 93 3L 8804027 8804117 TGCAGGCAATATGTGAACTG 59 8804170 8804191 TGGAGGTACTATCGAAGTAGGT 59 NA Drosophila melanogaster 61 foi FBgn0024236 FBtr0076624 2 1 1 80 3L 8524834 8524854 TCATTCAATATCTGGTAGCGC 58 8524896 8524976 CTGCAAGAGAATGAGGCAG 58 NA Drosophila melanogaster 61 CG7409 FBgn0035817 FBtr0076810 2 1 1 60 3L 7748022 7748040 GCCGTATTTGACCAACGAG 59 7748063 7748082 GCTTAGATACGAAGGACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7506 FBgn0035805 FBtr0076822 2 1 1 87 3L 7634114 7634193 AAATCAAGACTACTTTCCGACC 58 7634048 7634066 AGAGGTCGTTTGTTGACCA 59 NA Drosophila melanogaster 61 CG18417 FBgn0035780 FBtr0076855 3 1 1 70 3L 7394177 7394198 ACTTTGCATTCGTATGGATCAC 59 7394296 7394314 TCTTCTGTGTCGGGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18417 FBgn0035780 FBtr0076855 2 1 1 69 3L 7394178 7394198 CTTTGCATTCGTATGGATCAC 57 7394296 7394314 TCTTCTGTGTCGGGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8562 FBgn0035779 FBtr0076854 3 1 1 94 3L 7391466 7391569 AGGATTACGAGGGTTACCG 58 7391626 7391645 GAAATCGTATCCCTGCAGAC 58 NA Drosophila melanogaster 61 CG8607 FBgn0035760 FBtr0076837 1 1 1 60 3L 7313448 7313532 ATAAGAAACACCAACTGGATGC 59 7313553 7313571 GGCACATAGGGAATGTCGT 59 NA DesignRelaxed Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 2 1 1 97 3L 7233083 7233159 AAACAAAGTGACCTGCCTC 58 7233219 7233238 TAATAATCGGCTGATCGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301107,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106,FBtr0301958,FBtr0301110,FBtr0301108 1 11 11 91 3L 7043788 7044354 TCATCCAGGGTACAGAATCTG 59 7044407 7044425 GAGTTGAAGAGCACATCGC 59 NA Drosophila melanogaster 61 Jon65Aiii FBgn0035665 FBtr0077041 2 1 1 60 3L 6044097 6044115 ACAACACCTGGGTTCTCAC 59 6044198 6044216 TAAATGGTCACAGCGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32418 FBgn0052418 FBtr0077119 1 1 1 93 3L 5770233 5770312 GAAACGCATAGAGTTTCTCAG 57 5770160 5770181 CTCGTTCTTAAGGTTTCTTTCC 57 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 2 10 10 114 3L 5543936 5543954 TACTGGCGTTTCTTGTGTC 58 5538158 5538176 AACTTAGCAGAGTAGACGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13285 FBgn0035611 FBtr0077141 2 1 1 129 3L 5528360 5528546 TCGGCCAAGTTGTTAAATCTC 59 5528251 5528270 GATAGTATCCCGATGAGCCG 59 NA Drosophila melanogaster 61 CG1311 FBgn0035523 FBtr0073232 2 1 1 80 3L 4279107 4279192 GTTCATGAGAGTTCGCCTG 58 4279234 4279254 GAGCATGTCGTAGTAGTTCTG 58 NA Drosophila melanogaster 61 Teh3 FBgn0040697 FBtr0073257 1 1 1 60 3L 4184440 4184458 CGGTGAACAAGGACAACTG 59 4184398 4184416 GAAGTCTTGCTCAGACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258,FBtr0300621 3 2 2 134 3L 4181198 4181270 CATCATCACTCACCAAGTGC 59 4181083 4181104 CTGAGTTGATCAGAAACTTGGT 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 3 6 6 80 3L 4098072 4098090 AATCTTCCGAGTCTCAGGA 57 4097789 4098029 TACGATCGAACGATAGTTGG 57 NA Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 1 1 1 65 3L 4090083 4090101 CAATCCTGAGACCGGAGAC 59 4090130 4090278 CTTTAGCCCTAGGCAGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Faa FBgn0016013 FBtr0073278 1 1 1 185 3L 4073082 4073160 GAAGGCGGTTTCCATTGTG 59 4072915 4072933 CTTGCACGACCATGATAGC 59 NA Drosophila melanogaster 61 CG10866 FBgn0035475 FBtr0073173 1 1 1 87 3L 3937384 3937461 TATTTGGAGGATGCCACCA 58 3937315 3937333 TGCACATGTAGAACAGCAG 58 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 3 2 2 98 3L 3376027 3376103 TGAGATAGATTCGCTTGTTGG 58 3376163 3376181 TTCATTTCGGTCAACAGCG 59 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 2 4 4 80 3L 3365680 3365698 GTGCGCAAGATATCCTTCC 58 3365742 3365819 CGACTGTTGCTTCATGGAC 59 NA Drosophila melanogaster 61 CG14967 FBgn0035420 FBtr0302302 2 1 1 80 3L 3214803 3214823 GAGTTGACCTGGAATAATTGC 57 3214681 3214764 TCGTACAGTCACATTAAGTTCC 58 NA Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107 2 1 2 110 3L 3198855 3199000 GCTGAAAGTGAGATTGTGCT 58 3198764 3198782 TACATTGCCACGCATTGTC 59 NA InUTR Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072995,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072992,FBtr0072996,FBtr0073001,FBtr0113131 3 15 15 81 3L 3087425 3087510 TAATATGCATCAGCAGGACGA 59 3087553 3087571 TTGCACGGATTGAAGACAG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 R FBgn0004636 FBtr0072867 3 1 1 196 3L 1861666 1862068 AAGCATAGTGTGCTCTCGG 59 1861488 1861506 CCTTTGTGCCGTGTAAGTG 59 NA InUTR Drosophila melanogaster 61 CG7864 FBgn0035233 FBtr0072743 1 1 1 89 3L 1559024 1559043 AATAACCTTCAGACCCTCGG 59 1559093 1559167 CAGTTGTAACAATCTGCTGGG 59 NA Drosophila melanogaster 61 Rac1 FBgn0010333 FBtr0072730 2 1 1 110 3L 1302224 1302242 CGTGTTCGACAACTACTCG 58 1302132 1302150 TAAGACAGTGGCCTCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072643 1 1 2 60 3L 1099133 1099152 TGACTTGGAGATCAAGCCAG 59 1079664 1099112 GGAACTTACCCTTTCTTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42554 FBgn0260756 FBtr0301253 2 1 1 166 3L 835863 835947 TGAACTTGGCTCATTTCCAC 58 836076 836094 ATCGAGGGTCAATGTGTCC 59 NA Drosophila melanogaster 61 emc FBgn0000575 FBtr0072578 3 1 1 93 3L 750215 752277 CAGTTTAGCAACGCCACAG 60 752334 752352 AGGCTTATAGGTTCCGTGG 59 NA InUTR Drosophila melanogaster 61 CG3371 FBgn0035153 FBtr0072610 3 1 1 60 3L 683162 683182 CGCAAGTACCTAAAGCTACTC 58 683122 683140 CAATCAGCCGGTAGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DIP2 FBgn0024806 FBtr0072520 3 1 1 80 3L 257178 257196 ATTACGCAGAAAGGCTACG 58 257043 257136 TTTCACTTTATCGCCTTCTGG 58 NA Drosophila melanogaster 61 CG7049 FBgn0035102 FBtr0072537 2 1 1 60 3L 175440 175461 CTGAAGATGGGTTTGAGTACAC 59 175401 175421 AGGTCGTAAATATTCTGTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33357 FBgn0053357 FBtr0086349 1 1 1 60 2R 15652247 15652265 ATACATCGGTTCTCGTCCG 59 15652205 15652223 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 gsb FBgn0001148 FBtr0072444 3 1 1 179 2R 20949716 20950765 CCCTTTCAAGGACAAGGTC 58 20950905 20950926 GAAGCGGTTTAGAATCTTTGAG 57 NA Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 3 2 2 100 2R 20579933 20580205 CTTCATTGACACGCACGAC 59 20579851 20579869 AATTCACCACACGGATCGT 59 NA Drosophila melanogaster 61 CG42360 FBgn0259742 FBtr0299959 3 1 1 83 2R 20497411 20497429 GAGGCGAGTAATAAGCCGA 59 20497476 20497554 GTTTGAGTTGCCATGAGCA 59 NA Drosophila melanogaster 61 CG13579 FBgn0035010 FBtr0072298 1 1 1 80 2R 20370960 20371805 TCTGTCAGATACAGGCCCT 59 20371849 20371867 ATCTATCGACTGCCATGCA 59 NA Drosophila melanogaster 61 CG4049 FBgn0034976 FBtr0072285 1 1 1 113 2R 19998282 19998367 TTTGAACAAGAGTCCAAGCT 57 19998188 19998206 GGCTTGGGTAGAATACTGG 57 NA Drosophila melanogaster 61 snama FBgn0086129 FBtr0072249 2 1 1 81 2R 19976722 19976741 CATGATGAGTCACCACATGC 59 19976785 19977091 ATACGGCACATAGCTGAGG 59 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 1 1 2 99 2R 19954701 19954719 CAAATCTTGATGGCCGAGC 59 19953688 19953792 GATTATCCTCAATCTGGAGGGA 58 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 3 3 3 143 2R 19948088 19948209 GTTAAATTGGTGTACCTGCGT 59 19948377 19948395 CTTCAGACCCTTCCAGTCG 59 NA Drosophila melanogaster 61 Alas FBgn0020764 FBtr0072151 3 1 1 110 2R 19853638 19853800 CTGAAGCGAGAAGGTTTCC 58 19853873 19853892 GAATTGTTCGATCAGCACGT 59 NA Drosophila melanogaster 61 CG5339 FBgn0034925 FBtr0072220 3 1 1 87 2R 19785296 19785316 CATGTTCATACTGTCCGAGGA 59 19785172 19785248 CAACGTGACAGGTTCTTGAC 59 NA Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 3 2 2 128 2R 19767765 19767783 AGTCAGCATGTGATACCCA 58 19767875 19767969 AGAAGATTCCCAGGCTCTG 58 NA Drosophila melanogaster 61 Thiolase FBgn0025352 FBtr0072226 2 1 1 228 2R 19755727 19755994 GCCAGGAAAGTTCAATGCC 59 19755459 19755477 TGCCGTACACGATGTAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12491 FBgn0034900 FBtr0072089 1 1 1 60 2R 19638387 19638405 GTCCAGCAATAGCACTACG 58 19638429 19638447 CGAAGTGGAAGAAGAGCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 3 3 3 247 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596356 19596377 TTGAACATGGACTTGATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 IM18 FBgn0067903 FBtr0091694 3 1 1 60 2R 19489220 19489244 CCCAATAATCAGATCTATTCTCAGC 59 19489131 19489205 AACCAGATAACTTCTGATGGTG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 1 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 CG30185 FBgn0050185 FBtr0072060 2 1 1 84 2R 19432001 19432019 CAGCAAATCCTACCTGGTG 58 19432066 19432156 AAGGGATTTCACAAGATCGT 57 NA Drosophila melanogaster 61 bw FBgn0000241 FBtr0072117 2 1 2 87 2R 19417046 19417122 TTTACAGACCTGGGCTACG 59 19416977 19416995 TCTCTTTGCCCTCCTTGTC 59 NA Drosophila melanogaster 61 CG13540 FBgn0034839 FBtr0072000 1 1 1 60 2R 19158313 19158331 CAATCTTTCGGATGCGAGC 59 19158355 19158373 AATTGCTCCTCTTCGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9876 FBgn0034821 FBtr0071979 1 1 1 88 2R 18978465 18978483 TCGAACGCACTCACTATCC 59 18978215 18978414 AAACCAGACCTGAACTCTGG 59 NA Drosophila melanogaster 61 CG3800 FBgn0034802 FBtr0071994 2 1 1 70 2R 18823653 18823672 AATGTGTCGTGCTACAAGTG 58 18823602 18823620 CAAGTCTTCGAGGTCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13532 FBgn0034788 FBtr0071899 1 1 1 100 2R 18759826 18759844 ATCCCGACTGGAACATGAC 59 18759905 18760801 CGATTCAGGAACGATTATTTGC 58 NA Drosophila melanogaster 61 CG34208 FBgn0085237 FBtr0112401 3 1 1 62 2R 18220672 18220690 TTGTTCCTGGTATTCGGCA 59 18220716 18220734 TTCCGCTAGGGCTAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oatp58Db FBgn0034715 FBtr0071778 2 1 1 81 2R 18110763 18110838 CTTACAGAGATTTGCGACTGC 59 18110702 18110720 ATAGGTAAAGGCCATGGCC 59 NA Drosophila melanogaster 61 ari-2 FBgn0025186 FBtr0071774 2 1 1 98 2R 18101012 18102392 TACTACAACACAGGCGAGG 59 18102454 18102472 GATGTCCTCGACGGTTAGG 59 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801,FBtr0071802 1 2 2 180 2R 17960562 17960726 TCTATAAGCAGAGCTTTGCCT 59 17960332 17960350 TTGCTCAGGATGTCATCCC 59 NA Drosophila melanogaster 61 CG34370 FBgn0085399 FBtr0299544 1 1 1 80 2R 17882602 17886313 GGTCAAAGGTGTGAGAATGTG 59 17882542 17882560 CAACCAGTCGTAGGGACAG 59 NA Drosophila melanogaster 61 CG30401 FBgn0050401 FBtr0071731 2 1 1 171 2R 17874084 17874104 GTTTCATTGGACGACAAGGAG 59 17873878 17873951 AATAGTTGGCAGAACCCGT 59 NA Drosophila melanogaster 61 CG9294 FBgn0034666 FBtr0071720 2 1 1 80 2R 17749071 17749145 CCGATACCTTAAGGGAAGTG 57 17749188 17749206 TTTGTCCAGGCCTATACGT 58 NA Drosophila melanogaster 61 CG30395 FBgn0050395 FBtr0300226 3 1 1 80 2R 17656074 17656154 CTCAACCGATGATTTGAATCCT 58 17656242 17656262 GGACTTATCGGAAGAACACCA 59 NA Drosophila melanogaster 61 CG42381 FBgn0259727 FBtr0299989 2 1 1 60 2R 17557071 17557091 AAGACTTATCTACCAGACGCA 58 17556975 17557050 ATTATTTGTTCGACTTGCCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Acox57D-p FBgn0034628 FBtr0071606 1 1 1 80 2R 17275397 17275479 AATTAATCCCAACGAACGAGAG 58 17275520 17275538 CTTGTGGCAATCTCTGGGA 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 3 3 3 80 2R 17172236 17172255 ATCTATCAGATGTGAGCGGA 58 17172297 17172372 GATACATCAGCAGAATGGGC 58 NA Drosophila melanogaster 61 CG9350 FBgn0034576 FBtr0071530 3 1 1 106 2R 16912653 16912852 TAAATTTCGGCAGCAAACCA 59 16912921 16912939 ATACCGCGTACTTGTTGGT 59 NA InUTR Drosophila melanogaster 61 CG9346 FBgn0034572 FBtr0071526 2 1 1 80 2R 16900820 16900841 AGAGGACAAAGAGAATATGGAG 57 16900942 16901029 TTAAGAACAGCCTTCTCTGTG 58 NA Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0300946,FBtr0071519 3 2 2 137 2R 16832900 16832918 GGCTACTCTTTCACCACCA 59 16833019 16833037 AAGCTCGTACGACTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11180 FBgn0034528 FBtr0086254 1 1 1 173 2R 16510757 16510775 AAGTACAACTTGTGTCCGC 58 16510546 16510564 GAAACCCAATCCTTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 3 2 2 81 2R 16391210 16391291 CGTGGTCTCCATACAGAGTC 59 16391334 16391353 CTGGCTGATGTTATTGCTGG 59 NA Drosophila melanogaster 61 Obp56d FBgn0034470 FBtr0086477 1 1 1 60 2R 15591235 15591254 TGAAGTTCCTGATTGTCCTC 57 15591124 15591212 GATAGTTGCAGCTCAGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0100393 1 1 19 134 2R 15353170 15353188 TCATCCAGTGACAAGGCTC 59 15353747 15353765 AAACGTATTTGCGTTGGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33724 FBgn0053724 FBtr0091722 3 1 1 75 2R 14527708 14527727 TGGTGGATGATACAAAGCCT 59 14527831 14527849 AGCGGACTTCATAGTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086992 2 1 7 80 2R 13239799 13246819 GACAGATTAGAGACCTCACCT 58 13246860 13246879 GTTGATGTTGTTCAGCTGGT 59 NA Drosophila melanogaster 61 CG10956 FBgn0034195 FBtr0110777 1 1 1 80 2R 13010762 13010783 ACGGAGTTATTCATGTAGTCAC 58 13010642 13010723 AACTACCATTGCCAACATCTG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 1 9 9 92 2R 12955087 12955105 CTATCCCATGTCCTCGTCG 59 12954942 12955033 CTATAAGGTGAGTTGCTGCTG 58 NA Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 3 2 2 90 2R 12909214 12909232 CAGGATGTACATCGAGCAG 57 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 2 3 3 80 2R 12905300 12905583 ACATTGCCTTAACCAGAATCC 58 12905240 12905258 TTGTTCTCCATGCCATCGA 59 NA Drosophila melanogaster 61 ste24b FBgn0034175 FBtr0087060 1 1 1 98 2R 12887566 12887587 GGATGATCCACTAGCAATACTC 58 12887436 12887507 TAGGCCACTTGTATGTCCC 58 NA Drosophila melanogaster 61 Cng FBgn0014462 FBtr0087187 3 1 1 90 2R 12135409 12135744 GTCGCATTACAGATGGCTG 59 12135337 12135356 ATTGATCTCCCAGAAGACCG 59 NA Drosophila melanogaster 61 Prosbeta1 FBgn0010590 FBtr0087262 1 1 1 111 2R 11901546 11901633 CATTCGTCAAGAAGGCTGTC 59 11901454 11901472 TTGTAGAAGATGCGTCGCT 59 NA Drosophila melanogaster 61 Ir52c FBgn0050468 FBtr0087329 2 1 1 60 2R 11392677 11392698 CATACAGGAAAGGTCATATCGT 57 11392719 11392737 ACAGATGTCGTTCATCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112518,FBtr0112517 1 2 2 81 2R 11353241 11354092 TGGCTACAAGGTGACTGTC 59 11354136 11354155 TGGGAAGTATCCAACTCGTC 59 NA Nonspecific Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087385 3 1 3 85 2R 11270797 11270921 GATCATTGATCGCTACCATGTC 59 11270967 11270985 CCATTGCTTGCAAATCCCA 59 NA Drosophila melanogaster 61 CG11807 FBgn0033996 FBtr0087363 2 1 1 84 2R 11089621 11090533 TCAGCCCTAGAGGTCTACG 59 11090580 11090599 AGAAGTCGTACTTTCCACCG 59 NA Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404,FBtr0300325 2 2 2 80 2R 11087804 11087892 ATGTCCTATTTCATCAAGCCAG 58 11087745 11087765 CAGCATTTCTACTGTCAAAGC 57 NA Drosophila melanogaster 61 CG30480 FBgn0050480 FBtr0087478 3 1 1 60 2R 10563475 10563493 AATACGGCACCACATAGTC 57 10563433 10563452 CATAAGACTCGGCTTCACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttv FBgn0020245 FBtr0087495 2 1 1 80 2R 10470518 10470608 GACAGCTCAAGGTACATGC 58 10470652 10470670 CACATAGATAACCGCCGTG 58 NA Drosophila melanogaster 61 CG17388 FBgn0033937 FBtr0087489 3 1 1 116 2R 10330047 10330065 GTTGTTGCATCTGATGCTG 57 10330439 10330518 CATTCCACAGTGTCCACTG 58 NA Nonspecific Drosophila melanogaster 61 CG13339 FBgn0033871 FBtr0087632 2 1 1 142 2R 9712655 9712728 CAAGAAAGTTGGACAATTGGG 58 9712832 9712850 CTATGTTGAGGATGTCGGC 58 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 3 5 5 82 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436390 9436472 ATACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 CG4744 FBgn0033834 FBtr0087717 2 1 1 104 2R 9283157 9283175 GTCTCCAAAGAAGCCACAC 58 9282998 9283017 TATTTCAATCCGAGGTCGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 3 2 2 80 2R 9095636 9095655 TCACAGGAATCAAGAAAGCA 57 9095696 9095775 CTTGGCAATTGTATCTTGCTG 58 NA Drosophila melanogaster 61 vg FBgn0003975 FBtr0087785 2 1 1 80 2R 8774683 8774704 GCCTACTATCCATATCTGTACG 57 8774743 8778989 GTACAAATCCTGGTTGAACCT 58 NA Drosophila melanogaster 61 Ak6 FBgn0033754 FBtr0087891 2 1 1 80 2R 8457111 8457202 CAACATACTAATAACCGGAACTCC 59 8457054 8457075 CACTCAAACTTTAGTTCGGAGG 59 NA Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 3 1 1 62 2R 8316975 8317049 GAACTCTCAGCTGTCAAGC 58 8316931 8316949 GCCGAATAAACTGTGAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 1 1 1 61 2R 8316975 8317049 GAACTCTCAGCTGTCAAGC 58 8316932 8316950 CCGAATAAACTGTGAAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0087919 3 1 2 81 2R 8283000 8283129 CATTATTTCTGGAGTCCTCACAG 59 8283168 8283188 AACCTCATAGTAAATGCCGGA 59 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 1 3 3 60 2R 8212092 8212181 ATACTGTTGCTCCTATCGGG 59 8212051 8212071 CGGAGTATGCTTTGTTAAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112426,FBtr0112425 1 2 2 62 2R 8052822 8052842 GATAGTCTGAAACATGGTGGT 57 8052780 8052798 CTTTCGCTCAGAGTGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 128up FBgn0010339 FBtr0087976 3 1 1 86 2R 7926100 7926186 GCCAAGGAATTTAAATATGCGC 59 7926233 7926251 GTCGTTGAGAACGTGTTCG 59 NA Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 2 2 2 81 2R 7412684 7412702 AAAGGACAAGACCAACGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA Nonspecific Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088128 3 1 2 137 2R 7254592 7256056 TAGGTCTTTCAGTGGAGGC 58 7256156 7256175 AATCCATGTGATCTGCATGG 58 NA Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088200 1 1 2 60 2R 6797437 6797456 GTTCTAGTGCTATTGCTGGT 57 6797475 6797577 CCAGATTGATGTTTATCTCGCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7712 FBgn0033570 FBtr0088238 1 1 1 82 2R 6785085 6785179 TCCCTACATCGTCATGGAC 58 6785021 6785039 GATGCTTGACGAACTCCTC 58 NA Drosophila melanogaster 61 CG1418 FBgn0033468 FBtr0088440 2 1 1 92 2R 5851818 5851890 ATATACTGCCTCATCACGGC 59 5851745 5851763 AATGTTACTGTTGCGCACG 59 NA Drosophila melanogaster 61 CG1663 FBgn0033449 FBtr0088477 2 1 1 83 2R 5724929 5725005 GCCACCATGACTACATCTC 57 5725050 5725070 TGAAGTACTGAATAACTCCGG 57 NA Drosophila melanogaster 61 CG12926 FBgn0033437 FBtr0088502 2 1 1 91 2R 5496230 5496248 CTTTGTAAATGCGCCCTCC 59 5496096 5496178 AGTGTATATGAAACCGTTTCCG 58 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 2 2 2 88 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185036 5185786 GTATAGCTGATATGGCAGCCT 59 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 2 2 2 108 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957125 4961589 AGATATCGTTGAGTCGCTGAG 59 NA Drosophila melanogaster 61 CG13745 FBgn0033354 FBtr0088675 2 1 1 80 2R 4826307 4826387 GATAGCATTGACTTGTTCTCGG 59 4826248 4826272 CATAGTACAGTAGTTCAAGTGATGC 59 NA Drosophila melanogaster 61 CG13751 FBgn0033340 FBtr0088644 1 1 1 87 2R 4787983 4788001 TTCTCAAATCGCTCCTGGA 58 4788052 4788070 AAATCGTTGTCCTCCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30357 FBgn0050357 FBtr0088721 2 1 1 60 2R 4608893 4608912 GAATAAGGATGTCGAAGCGG 58 4608852 4608872 TAGCTCATCATTCATCTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30355 FBgn0050355 FBtr0088726 2 1 1 95 2R 4566936 4567012 AGTACTGACATGAGATGGCG 59 4566860 4566881 GTCATCTCTTTCGGTTGATCTG 59 NA Drosophila melanogaster 61 CG14760 FBgn0033277 FBtr0088794 2 1 1 290 2R 4142828 4142849 CTATTTACCTTGACAAGTTGCC 57 4143100 4143585 GATGATGAATGATCGCAGC 57 NA DesignRelaxed Drosophila melanogaster 61 Mlh1 FBgn0011659 FBtr0088790 3 1 1 99 2R 4058583 4058601 GTTCATCAACCAGCGACTG 59 4058720 4058739 ATATACGAAAGGATGGTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088814 1 1 4 122 2R 4035888 4036440 TCAGTAGGATCAGTAACAGGA 57 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 Vps28 FBgn0021814 FBtr0088825 1 1 1 64 2R 3967404 3967422 GTGAAGCTCTTCCGTAACG 58 3967358 3967376 ATTGCGTATAGATCGGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30377 FBgn0050377 FBtr0088844 2 1 1 110 2R 3794848 3794866 GAGATGTACTACGGCACCA 58 3794939 3801870 CGAGGATGGATAGGACAGAG 58 NA Drosophila melanogaster 61 CG18853 FBgn0042173 FBtr0089426 1 1 1 297 2R 3717029 3717109 CAAGGTCAGAGCAATTATACCA 58 3717367 3717385 AGTGCTCGTTGTAGAAGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088835 2 1 4 152 2R 3700183 3700790 GAATTCACTCCCGTGATCC 58 3700906 3700924 CGATATCCACGAAGAAGCC 58 NA InUTR Drosophila melanogaster 61 CG2137 FBgn0033190 FBtr0088907 2 1 1 60 2R 3424710 3424728 CGATACACTGCACCATACC 58 3424752 3424770 CATGTTTCGAGGTCCTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11060 FBgn0033149 FBtr0089045 2 1 1 110 2R 3064509 3064527 GATTACCGCAATCCTGTCG 58 3064598 3064712 CGGACTTAGATTCTGAATGTCC 58 NA Drosophila melanogaster 61 pgant3 FBgn0027558 FBtr0089061 1 1 1 80 2R 2945930 2945950 ACCACTTCGAATGTAATGCTG 59 2945813 2945891 TATTTGCTGAGTATCCATGTCG 58 NA Drosophila melanogaster 61 Tsp42Ek FBgn0033133 FBtr0089031 1 1 1 80 2R 2931545 2931565 AGGAGGTTCAGATGAAATGGG 59 2931606 2931726 CACAACACTCGTACACTGTC 58 NA Drosophila melanogaster 61 CG34211 FBgn0085240 FBtr0112404 3 1 1 60 2R 1934748 1934766 CTACCTGGTCCTTGTTTCC 57 1934790 1934808 CAAGGTGGACTCTACAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dream FBgn0033051 FBtr0086028 2 1 1 164 2R 1909384 1909457 AAACAGTGCGAATGTTGCA 59 1909238 1909256 CCTTAAGCGTCCTATTGCG 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 2 4 4 81 2R 705342 705360 TATATGCTGTCTGCGGGAC 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111112 1 1 2 80 2R 434474 447873 TTTGTACAAGCAGGTTTCCG 59 447911 447934 CGGAGTGAATATAAGTAAGTGCTG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-C437 FBgn0086032 FBtr0114308 2 1 1 61 2L 4085942 4085961 ATAGGGAAAGAAACTCCGCC 60 4085985 4086003 GTTCAGTTGTCGCTGAACG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR12628 FBgn0042701 FBtr0085952 1 1 1 60 2L 22226248 22226268 TCCCGTATTCAAGAGTTTCAC 58 22226288 22226308 CATCAACAGCATATTGATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42647 FBgn0261430 FBtr0302351 1 1 1 86 2L 22441003 22462336 AAAGGAAGGCATTTCGGAC 58 22440935 22440953 TAATGACCATCACCTCCGG 58 NA Nonspecific Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 3 3 3 110 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473856 22476863 GCTTTACAATCTCGTTTCGC 58 NA Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942,FBtr0085941 3 2 2 60 2L 22129034 22129054 ACGATGGAAATACTCGAAGAC 58 22128994 22129013 TTTGGGTTGATTGGTACAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33874 FBgn0053874 FBtr0091878 1 1 1 60 2L 21523255 21523274 AGAAGAACATCACCAAGACC 57 21523214 21523232 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 del FBgn0086251 FBtr0081502 2 1 1 69 2L 21148217 21148236 AGTTGGAGAAAGCCCTACTG 59 21148103 21148121 CCAAGAGCTCCTTTCTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12050 FBgn0032915 FBtr0114615 1 1 1 80 2L 21101005 21101024 CTCTGGTACTAAATGGCCGA 59 21100880 21100962 CCACGCGAAGATTGTACAG 59 NA Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290306 1 1 2 121 2L 20968797 20968815 CACATGTGCGCTCTAAACC 59 20967654 20967672 ATGTGCTTGTTGTACTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9316 FBgn0032878 FBtr0081396 2 1 1 80 2L 20725803 20725876 ATGGTTGCTATACAGGCCA 58 20725741 20725761 AGTTCCATAGCAGACAGTCTC 59 NA Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0081361 2 1 2 123 2L 20451268 20451378 GTGTAATAGGTGGCCATTTCC 59 20451463 20451481 GAGTAGTCTACGGCCACTG 59 NA Drosophila melanogaster 61 CG10631 FBgn0032817 FBtr0081324 2 1 1 87 2L 19754190 19754209 AAATTCAGCGAATTCAGCGA 59 19754064 19754140 AACTGCTAGTGGTCCTTCC 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0299519,FBtr0302107,FBtr0299520,FBtr0081281 3 6 6 84 2L 19515104 19515183 GATATCCAATGCGAACCTCG 59 19515039 19515057 ATCCGTACGTGTAGCACTC 59 NA Drosophila melanogaster 61 CG13085 FBgn0032780 FBtr0081203 2 1 1 174 2L 19426683 19429405 AGGAAGAAATCAAGTGTGCA 57 19429542 19429560 CATGCTGAACCTCAAGTCC 58 NA InUTR Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211,FBtr0081213,FBtr0081212,FBtr0081210 3 5 6 80 2L 19409697 19409780 TGTTCCTAACGGATCTGCG 59 19409635 19409653 TTCTCCGTCTTCGTTTCCC 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 1 2 3 81 2L 19385786 19386099 GTGGTCTGTGGAGATTTCCA 59 19385344 19385362 GTCCGTGGGTACTGTAGTG 59 NA Drosophila melanogaster 61 drl FBgn0015380 FBtr0081195 2 1 1 81 2L 19207430 19207448 TCCCTATGAGATGGAGCAC 58 19207493 19207635 AATGGTGAAGAGCTCATCG 57 NA Drosophila melanogaster 61 amd FBgn0000075 FBtr0081153 2 1 2 110 2L 19110340 19110420 ATACGTGAGAGGGATGTCCT 60 19110493 19110511 CAGATCCTTGAGGACCTCG 59 NA Drosophila melanogaster 61 CG10495 FBgn0032750 FBtr0081150 3 1 1 109 2L 19063373 19063392 TTTATAACCATGCACCTGCC 59 19063464 19063543 CTATAGCGCACCATTGGAG 58 NA InUTR Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 2 2 2 87 2L 19009004 19009022 AAGCAGACCTTGAAGACCC 59 19008530 19008953 CGATCTCGGACTTCCTCAG 59 NA Drosophila melanogaster 61 Grip71 FBgn0032705 FBtr0081099 1 1 1 81 2L 18709469 18709551 CCATAGATGGCGACTCTACTC 59 18709593 18709612 ACGGCTCCTTTATAGGAAGC 59 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 2 2 2 99 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699101 18699120 GTCATGGCTTGTGTTGACTC 59 NA Drosophila melanogaster 61 CG31802 FBgn0051802 FBtr0081058 2 1 1 60 2L 18208659 18208677 GAGATGATCGACGAAGCCA 59 18208617 18208635 TGAGAAACTCCTCCTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15147 FBgn0032654 FBtr0080988 1 1 1 60 2L 17626055 17626073 TCCAGCTAAGGATCAACGA 58 17626013 17626032 GCAATAGCAACCTCAAAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6453 FBgn0032643 FBtr0080998 1 1 1 138 2L 17483264 17483282 CCGCGTATTAAGTCTCTGC 58 17483079 17483162 GTTCAGCTTGTTCTTCGCT 58 NA Drosophila melanogaster 61 CG5043 FBgn0032636 FBtr0080980 1 1 1 94 2L 17434122 17434207 AGAAGGATAATGCCTCAGTAGAC 59 17434261 17434279 CAAGGAGTTGTCCGAGGAG 59 NA Drosophila melanogaster 61 Rpb11 FBgn0032634 FBtr0081011 1 1 1 81 2L 17410024 17410099 CATGATCCGCAACCAACTG 59 17409961 17409979 GAACTTGTGCTCCAGAGGA 59 NA Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0302189 3 1 2 68 2L 16876200 16876218 AGTCATTTCGACCATGTCC 57 16876248 16877514 CCTTTAGGATGTCAGCTTCTC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cyt-b5-r FBgn0000406 FBtr0080932 3 1 1 81 2L 16789890 16790230 AAGAAGAGTGATCTCATTCACC 58 16789830 16789849 AAAGGCTGTTGTATTTGGCA 58 NA Drosophila melanogaster 61 CG4891 FBgn0028520 FBtr0080815 2 1 1 60 2L 16095336 16095355 TATGTGGTGAGTCCTGAGAG 58 16095378 16095396 AGGACTCGGTTAGTGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3793 FBgn0028507 FBtr0080761 3 1 1 152 2L 15765068 15765088 CAGGCAGAAGTTGATTACTCC 58 15765201 15765284 GTTCATGTTGACCTGTTCGT 58 NA Drosophila melanogaster 61 pburs FBgn0032546 FBtr0080634 1 1 1 80 2L 14417113 14417133 CAACAAATGCGAAGGATTGTG 59 14416995 14417074 CAGTAGCACTCTTTCAGAAACC 59 NA Drosophila melanogaster 61 CG31846 FBgn0051846 FBtr0080504 2 1 1 246 2L 13462048 13462066 ACCCGAGAAGATGTTTGTG 57 13483522 13483540 TTCCAATTCATGGCGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 2 1 1 80 2L 13257053 13257071 GAAATATGGACGTGCAGCG 59 13257115 13257190 CCACTGCAGGAATCTTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16972 FBgn0032481 FBtr0080488 3 1 1 92 2L 13202402 13202556 ATCGAGATCAACGACTCACC 59 13202329 13202347 GAACTGGTCAACATTGCCA 58 NA Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290239,FBtr0290240 1 2 2 60 2L 12208494 12208514 AGTCGTCACCCAAGATATCAG 59 12208530 12208554 CAAATCGTAGACCGTATCTAATACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ada1-1 FBgn0051865 FBtr0080289 1 1 1 60 2L 11997671 11997689 CGATGTGACCTTCCTCTCC 59 11997777 11997795 GGTGATTACTGTGCGTTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG16965 FBgn0032387 FBtr0080284 3 1 1 80 2L 11982336 11982417 CGAAACTCAAGGATTAACTCTCC 59 11982456 11982475 CACAAAGTCGAAGGCATCAC 59 NA Drosophila melanogaster 61 CG42486 FBgn0259989 FBtr0300437 1 1 1 60 2L 11843834 11843854 TGTAATCTTCGAAAGGCAGAG 58 11843873 11843894 CACATCGATTCTGATAGGTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Csl4 FBgn0032346 FBtr0080226 1 1 1 150 2L 11123435 11123453 TGAGACTGTAGTCTGCCTG 58 11123249 11123321 CACCTGGCATTTATCACCC 58 NA Drosophila melanogaster 61 CG6230 FBgn0027582 FBtr0080228 3 1 1 80 2L 11117099 11117179 GTCAATTATGTGCGTTAACCAC 58 11117040 11117060 GCAAGGATCTTGAACATTTGG 58 NA Drosophila melanogaster 61 piwi FBgn0004872 FBtr0080166 2 1 1 83 2L 10983721 10983740 GAGAGCAATGGATGATTGTG 57 10983532 10983675 GATGAGTATCTTTCGGCGT 57 NA Drosophila melanogaster 61 CG7384 FBgn0032262 FBtr0080135 2 1 1 99 2L 10509777 10509795 TACAGTATCCGTGGTCAGC 58 10509634 10509715 ATTGATGTGTTCTGTGCTCG 59 NA Drosophila melanogaster 61 TfIIB FBgn0004915 FBtr0080025 3 1 1 94 2L 10431812 10431830 AGGAGATATCCTCGATGGC 58 10431886 10431961 GTTCTTTCCATCATGAACCTG 57 NA Drosophila melanogaster 61 rho-5 FBgn0041723 FBtr0089855 1 1 1 90 2L 10369519 10369598 GCTCTCAGATATCGTGCCT 59 10369447 10369467 GAAGTGAGCAATCGGTATAGC 59 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 1 2 2 83 2L 10240584 10240690 AAACAACTGATGTGACCGA 57 10240734 10240755 TCTCGAATATACCCATAAGCAG 57 NA Drosophila melanogaster 61 CG34048 FBgn0054048 FBtr0100103 3 1 1 100 2L 10126072 10126090 TACGAGGTAACCATGCGAC 59 10125874 10126010 GCACGTACTTTCTGTCTTTCC 59 NA Drosophila melanogaster 61 CG42366 FBgn0259712 FBtr0299965 3 1 1 80 2L 9926996 9927075 TTCTCTTCCAGGTCCTAACTG 58 9927117 9927135 GCAAGTTCTCCGGTTTCAG 59 NA Drosophila melanogaster 61 CG5885 FBgn0025700 FBtr0079900 2 1 1 88 2L 9917857 9917942 TTCCAATCTGGCTCTTCTGG 59 9917788 9917806 ATAAGTACTAGCGGCCGTC 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 2 3 3 80 2L 9575427 9575512 GTAAACTTCGCGTAAATCGC 58 9575366 9575384 TCTTCACAAAGTCGGTGTC 57 NA Drosophila melanogaster 61 tai FBgn0041092 FBtr0079794 1 1 1 80 2L 9241540 9241615 GCTGCTCAAGCTACTAAACG 59 9241656 9241676 GAGTTGTTCATAGAACCTGGC 59 NA Drosophila melanogaster 61 CG9582 FBgn0032090 FBtr0079778 1 1 1 60 2L 9024768 9024786 AAGACATTGTTCCAAGCCC 58 9024726 9024745 GCTATGATGACCTTTCGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 2 1 1 83 2L 8520511 8520529 ACCTATACCAAGGCACTGG 58 8520574 8520687 AATTATCGCAGGACGAAAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13088 FBgn0032047 FBtr0079681 1 1 1 80 2L 8490117 8490135 AAAGTTCTGCTAAGTCGCA 57 8490176 8490252 ATCCCGTAGAACTTTACTAGGA 57 NA Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301169,FBtr0301170 2 2 2 94 2L 8319141 8319160 CTAAGACCAGTTGCGATGTG 59 8318950 8319085 AGGAACAACACTTTCTGGTC 58 NA Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 1 2 2 104 2L 8210627 8210645 AAGGGCTATCCCGAAACTG 59 8210465 8210560 TGACTTCTCCTCATCCTTGC 59 NA Drosophila melanogaster 61 Wwox FBgn0031972 FBtr0079550 1 1 1 98 2L 8003460 8003541 ATTAAGCAGAGTGTTAGCCAC 58 8003382 8003400 GAATGTGGTCTCCAGACCA 59 NA Drosophila melanogaster 61 TepIII FBgn0041181 FBtr0079477 1 1 1 80 2L 7705566 7705647 TATTGCACTTTGAGATTCCCG 58 7705688 7705707 TGGTAAACTGAACTCCTCCA 58 NA Drosophila melanogaster 61 Wnt4 FBgn0010453 FBtr0089291 2 1 1 90 2L 7257254 7275371 AGGCCTTTACAACGAACAC 58 7257182 7257200 CATGTATCTGCAGGGTCCA 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 3 5 5 81 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 3 2 2 83 2L 6862440 6862458 CGGTGGCTACCTAATATCG 57 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336,FBtr0079337 3 2 2 91 2L 6775882 6775974 GATATACCCAAGTTTGACGAGAG 58 6776025 6776043 ATGATCTCCTCGTGAGCTC 58 NA Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 1 2 2 80 2L 6729866 6729886 CCATTCAGGAAATGGTTTCAC 57 6729928 6730058 GGTTCATATCGCCAAATGC 57 NA Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 3 2 2 81 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469925 6469944 CATTCCCTTGGGATGATCGA 59 NA DesignNoJunction Drosophila melanogaster 61 slam FBgn0043854 FBtr0290281 1 1 1 87 2L 6375234 6375252 TTACCTCCAGTGCATCCAG 59 6375303 6375387 TCGTCGCTGGTTATCTTGG 59 NA Drosophila melanogaster 61 CG31642 FBgn0051642 FBtr0079199 2 1 1 231 2L 6118531 6118552 AGGTGTTCATCAGTTGAAAGTG 59 6118805 6118823 TATCTTGCAGTTCTCGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218,FBtr0079217,FBtr0299810,FBtr0112945 1 4 4 60 2L 6047410 6047430 CTGAAGACAAACAACCTCACC 59 6047370 6047389 CATAGTAGAGCACCTCGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079173 3 1 2 113 2L 5970469 5970488 GCCCTGACTTCCATTTACAG 58 5970633 5970651 AAAGTCATAGCAGCTGACG 58 NA DesignNoJunction Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 2 2 2 120 2L 5892729 5892808 CTCCTGCATTTGCCTTTGG 59 5892627 5892648 ACTGTAGTCGTATAGGGTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14005 FBgn0031739 FBtr0079160 1 1 1 128 2L 5801773 5801791 CTCCTACACGGACAACCTG 59 5801600 5801684 CGATCGTTCAAATACTTGTTGC 59 NA Drosophila melanogaster 61 CG31913 FBgn0051913 FBtr0079138 3 1 1 60 2L 5784642 5784661 ATGGAAGATAAGGAGCAGGA 58 5784681 5784702 GAGGATTGTTCTGAATACTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11030 FBgn0031736 FBtr0079135 3 1 1 92 2L 5759280 5759299 AAGCCCGTTTATTACGATGG 58 5759354 5759438 CATGGAAGACGTAATGGCC 58 NA Drosophila melanogaster 61 Cyp4ac1 FBgn0031693 FBtr0079066 3 1 1 80 2L 5264434 5264454 TAACGAAGAACGTGGTTTACG 59 5264496 5264572 AATGCCATTTGTGATCCGT 58 NA Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 2 2 2 173 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051409 5051427 GTGGGTATTGATCTGGCCA 59 NA Drosophila melanogaster 61 CG31917 FBgn0031668 FBtr0079037 3 1 1 281 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010403 5010421 CTTGATGCGGTTGGATTCG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ir25a FBgn0031634 FBtr0289979 3 1 1 80 2L 4834245 4834882 ATCACCAAGTGTTCATCAACG 59 4834185 4834205 TCTTCTTCAAGTAGGTGAGCA 58 NA Drosophila melanogaster 61 CG3251 FBgn0031622 FBtr0077422 1 1 1 80 2L 4690501 4690575 CTTCCACTGAAGTTAGAAAGGC 59 4690442 4690463 CTAGCATATGCTTCCGAAAGAG 59 NA Drosophila melanogaster 61 BG642163 FBgn0083938 FBtr0110769 1 1 1 105 2L 4641383 4641461 TATCTCCAAGAACAACTTCCC 57 4641526 4641546 CAAAGGTATCCTGAGTTTGGA 57 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071,FBtr0077434 2 2 2 81 2L 4401279 4401358 TTTCCGAGGACCTTCAACTC 59 4401402 4401420 GACTTGTCGTGGATGTCGA 59 NA Drosophila melanogaster 61 CG2816 FBgn0031564 FBtr0300299 2 1 1 97 2L 3703730 3703748 CATGATGCCGGCTTATTGG 59 3703808 3703880 GCAGGCATAGTTTCACTCTC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34448 FBgn0085477 FBtr0112752 1 1 1 80 2L 2416922 2417000 GTCTCAGAAGATGCGTCTG 58 2416860 2416878 GACTTCAACCAGAGGTCCT 58 NA Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077788,FBtr0077787 1 2 2 60 2L 2416344 2416364 GGATAATGTAGAACACCGCTG 59 2416304 2416323 CATGTTCATCTTGTGGTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10880 FBgn0031398 FBtr0077843 2 1 1 113 2L 2215586 2215604 GAGATTGCCAAGGATCTCG 58 2215436 2215454 AATAGTAGCCAGGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 lectin-22C FBgn0259230 FBtr0299675 2 1 1 60 2L 2037126 2037147 CTAGTCAATGTGGAGGATTCTG 58 2037087 2037107 ATGGTCAGGTGATTTAACACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 3 5 6 197 2L 1726645 1727655 AAAGTACTTGTGACAGCAACG 59 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077915 2 1 2 124 2L 1613141 1613159 CGGTTACTTTCAAGTGGCG 59 1612980 1613053 CACACGTTGATCATCAGCC 59 NA Drosophila melanogaster 61 CG33128 FBgn0053128 FBtr0077930 2 1 1 60 2L 1494357 1494375 ATTATCCCAGCCAGACCTC 59 1494399 1494417 ATGTTCATCGAGTTGCCCA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926,FBtr0077927 2 2 2 85 2L 1368302 1368372 ACATACGATCTGCATGGCA 59 1368421 1368439 CTGTAAATCGTGCCATGCC 59 NA Drosophila melanogaster 61 CG5565 FBgn0031335 FBtr0077944 3 1 1 97 2L 1355619 1355710 CCTTGATAGATAGCGAAGGC 58 1355541 1355559 CATATGCTGCGTCTGATCG 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089643,FBtr0089642 3 2 2 101 X 20299188 20299268 CATTAAGAAACACGAGGGTCG 59 20299107 20299125 ATTTGCGCAATGTCTTCGG 59 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 3 5 5 166 X 15688455 15688538 AGATCCACGTAACAAAGTTCC 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073684,FBtr0073683 1 2 2 126 X 12572082 12572379 ACATCCAGATACAAGACCGAG 59 12572467 12572485 TGTACTTGGGATGACGGTG 59 NA Drosophila melanogaster 61 CG1514 FBgn0029976 FBtr0071092 1 1 1 80 X 7809971 7810052 CAAGTCCATGAACTACAACGG 59 7810091 7810112 GAACTTAAAGTTCGTAGGCAGG 59 NA Drosophila melanogaster 61 wds FBgn0040066 FBtr0070438 1 1 1 80 X 2481349 2481368 TGAAGACGTATACGGGTCAC 59 2481411 2481483 TCACGATCCACTTTCCTCC 59 NA Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 3 2 2 163 3R 12677052 12677070 TTCCTATCGCCACTCACTG 59 12677196 12681549 TATGGATGTCCTTGGTCCAG 58 NA Drosophila melanogaster 61 CG13837 FBgn0039042 FBtr0084345 3 1 1 60 3R 18869925 18869944 TGTTTGGATCGAAAGTTGGT 58 18869966 18869985 GGGATTTAGTGGTTATGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8369 FBgn0040532 FBtr0081920 2 1 1 216 3R 4647841 4648202 TTTCTAGCACTGTGCTTGC 58 4648382 4648457 TCTGCTCGAATGGATCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8145 FBgn0037617 FBtr0081911 1 1 1 80 3R 4550094 4550182 AGGAAGTATAGTTGCGATGTC 57 4550222 4550242 GTGGGTATTGGAGATGAAGTG 58 NA Drosophila melanogaster 61 Cpr72Ec FBgn0036619 FBtr0075424 2 1 1 60 3L 16359874 16359892 GTACGAGCCGAGCTATCAG 59 16359832 16359852 TCCTAGGCAGATTAAGCTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht7 FBgn0035398 FBtr0073124 2 1 1 80 3L 3091931 3091949 AAGGTGGAGTTGGAATACG 57 3091809 3091889 CACATCATGAGGATCTTTGGT 58 NA Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972 3 1 2 141 3L 258395 258471 CAGAACTTGAAGATCCAAGAGG 58 258573 258591 AATATTGGGCGCATTTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300252,FBtr0300253,FBtr0300231 3 4 4 111 2R 10510738 10510929 TCGTCCTAAGATGATGTGACC 59 10511213 10511237 CCTTTATAGTTCTTCTGAAGTCCAG 59 NA Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0072453 3 1 2 84 2R 21073904 21073925 GTTCGATTATCGTAAACACCAC 57 21073790 21073860 CCCTGAGTATAAGTTGCCTG 57 NA Drosophila melanogaster 61 CG15083 FBgn0034399 FBtr0086618 3 1 1 128 2R 14722901 14722919 AAATCGATCTGACGGTGGA 58 14723008 14723796 TAAAGGTAAGAACGTTTGGAGC 59 NA Drosophila melanogaster 61 CG10950 FBgn0034205 FBtr0086990 3 1 1 165 2R 13082730 13082753 ACATCTACCTCATAGTTCACAGAC 59 13082930 13082948 AATGAAATGTTGCCCGAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4439 FBgn0034132 FBtr0087087 2 1 1 81 2R 12378858 12378879 TCTACACTGGGATTATTCAGGT 58 12378921 12379018 CACTCTTGCATCTCACCTG 58 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 1 2 2 80 2L 16986135 16990245 GACATGATTGTTGTGGTGACC 59 16990287 16990305 GACCATGTCGCCAATTTGG 59 NA Drosophila melanogaster 61 CG4709 FBgn0032169 FBtr0079884 2 1 1 94 2L 9954521 9954601 AATACGAAGCACAATTGCTC 57 9954657 9954676 CAGATTGTTCTTTAGGGCCA 57 NA Drosophila melanogaster 61 Pez FBgn0031799 FBtr0079284 2 1 1 80 2L 6333905 6333924 CAGCTAACCGAGGATATGAG 57 6333790 6333864 TTCCTGATACACTTGGAACTG 57 NA Drosophila melanogaster 61 dpr3 FBgn0053516 FBtr0300671 2 1 1 80 2L 2066562 2066583 GAAACGTGATCTGCATATCCTG 59 2065727 2066522 TCCTTCGATTCAGTCACCTG 59 NA Drosophila melanogaster 61 CG33127 FBgn0053127 FBtr0078052 1 1 1 60 2L 322211 322232 GAGGGATACAGAACAAGTTCAC 59 322248 322271 CACATCGTAGCCATCTATAATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319,FBtr0080320 1 2 2 99 2L 11962057 11970264 AAGGGCAGTGAAATTCCTG 58 11961976 11961994 CTTCAGTAGAGCGGTTCAG 57 NA Drosophila melanogaster 61 CG2116 FBgn0030003 FBtr0071152 1 1 1 60 X 8024198 8024218 GTGAAGGATTTGACGGATGAC 59 8024238 8024258 TCATATCCAATTCCCTGACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 3 2 2 81 3L 22062292 22062491 AATTGCTTTGTGTTAGGCGA 58 22062230 22062250 GTTGATCCAGGATTCCATTGC 59 NA Drosophila melanogaster 61 CG5002 FBgn0034275 FBtr0089546 2 1 1 86 2R 13638784 13638802 CGTAATCACTGGCTTCACC 58 13638852 13638944 TTCGAAGGACTGGTCAGAC 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 1 4 4 88 2L 21255234 21255252 GAACTTCGGTCAAGTCGGA 59 21255302 21255546 CATGATTTCCTGCAGTAGTGG 59 NA Drosophila melanogaster 61 CG15425 FBgn0031591 FBtr0077471 3 1 1 67 2L 4258162 4258239 TCATAGTGCTTGCAAACGG 58 4258270 4258288 TACTCATGTACGTGGGACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113721 2 1 3 65 XHet 69223 75534 GTCACATTGGATCCGACGA 59 69176 69194 ATTTACCGGACCACACTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188 3 1 2 139 X 22361334 22361352 CATCAATCCACCTGGTGAC 58 22360937 22361231 CTGGAGTGATGCTTGTGAC 58 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 3 4 4 80 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198159 17198177 GATCTTCATCGAAGGCAGC 58 NA Nonspecific Drosophila melanogaster 61 CG33252 FBgn0053252 FBtr0074346 3 1 1 82 X 16791018 16791038 CGTCTGGAAATTCTCGAACAC 59 16790877 16790975 AATTTGAGAACGCTCGAAGG 59 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 1 2 2 80 X 15686482 15686563 TTCTTGAAGAACAAGGCATCAC 59 15686604 15686622 TCTGAACTTCTCGAGCTCC 58 NA Drosophila melanogaster 61 CG8191 FBgn0030675 FBtr0074083 1 1 1 60 X 15627004 15627023 ATTGCCTACCTAATCGACCA 58 15627045 15627064 GCATCTCATCCAAGTCTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5599 FBgn0030612 FBtr0073964 1 1 1 80 X 14981975 14982056 CATAGGAGTGATTGGCGGT 59 14982100 14982118 TTGGTCCTACCCATAGCAC 58 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 3 3 3 80 X 14143264 14143282 CGTGAAGCTAACCGAAGAG 58 14143326 14143421 AGGCATCCCTTCATATGCT 58 NA Drosophila melanogaster 61 CG15719 FBgn0030440 FBtr0300371 3 1 1 81 X 12898406 12898479 TATGATGGTTGAGAGCGAGAC 59 12898345 12898365 AATGCCGATATTGGATCTCCT 59 NA Drosophila melanogaster 61 CG34144 FBgn0083980 FBtr0110988 1 1 1 242 X 11192252 11196639 ATGTTGTGGACATCTCTGC 57 11192028 11192046 TGGCAACGAAATTCGAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12637 FBgn0030224 FBtr0071504 1 1 1 60 X 10566719 10566738 CATTTCGAGGTGATTCTCCA 57 10566678 10566698 GAATAATAGCCGGATACACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42246 FBgn0259098 FBtr0299508 3 1 1 123 X 7305736 7305818 ATCCAAATGACACTTGCACTG 59 7305633 7305655 TCGTATCTCTGGTATAACCAGTC 59 NA Drosophila melanogaster 61 nullo FBgn0004143 FBtr0299565 2 1 1 72 X 6943722 6943740 ACATCCAGAGACTCGTCCT 59 6943776 6943794 TTGGAGCGCTTGTTTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070907 2 1 2 231 X 6246514 6252952 GAAACTGCCAAATGTGGGA 58 6253147 6253165 GATACCCTCGTCAGCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Vsx2 FBgn0053980 FBtr0100024 1 1 1 99 X 5425471 5440769 GATCGCATACAGGTGTGGT 59 5425390 5425408 CATAGAGACCGTACTCGGC 59 NA Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 3 1 1 251 X 2627203 2627281 CATTTGCGGCAAACAACTG 59 2627495 2627514 CACTGTAGGGAGGGATTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293,FBtr0070294 3 2 2 131 X 1368735 1368753 CCAGTTCATCTCCACTGTG 57 1368458 1368476 GTGGTTAGTGAACGGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CR41605 FBgn0085815 FBtr0114273 1 1 1 60 U 2950898 2950919 AGAACGAAAGTTAGAGGTTCGA 59 2950859 2950880 ATCGTTTCTGGTTAGAACAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40635 FBgn0085506 FBtr0302344 1 1 1 97 U 9364016 9364088 CACCAGAACAATAAGCCGA 57 9363937 9363955 ATGTAGTCGATAGGCACGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 2 4 4 121 U 1092306 1092325 CAGATCTAAGTTGCGATCCT 57 1092151 1092224 GTAAAGAGAATTCACTGCTCG 57 NA Drosophila melanogaster 61 CG11077 FBgn0039930 FBtr0089222 3 1 1 60 4 1049499 1049520 GCTACCTATCTATATTGGTCCG 57 1049460 1049478 AAGTTTAGCATCTGTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385a FBgn0082962 FBtr0113577 3 1 1 60 3R 1422156 1422176 AGGGTTCATGTACAGTATGCA 59 1422116 1422134 GGCATTGGGTTATATGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960,FBtr0085780,FBtr0085779,FBtr0300961 1 4 4 80 3R 27011415 27011435 TGAACTGGCTTTCTCATACTG 58 27010804 27011375 CATTGAATCCGACATATGCAG 57 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 1 3 3 80 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986982 26987000 GATGAGTTTGTCGAGCAGC 59 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 1 2 2 90 3R 26317439 26317457 ATCTTCATCGATCCCTGCA 58 26317511 26317597 ATCCAGATGTTGCCAATCC 57 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085528,FBtr0300023 3 2 5 136 3R 25659674 25659692 CATTTAGCTCCCTCGAGGA 58 25658061 25658926 CGAACGTTTCCTAATTATGCTC 58 NA Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 3 2 2 187 3R 25547146 25547374 AATGAGAGGCTCCCTTACC 58 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5017 FBgn0039553 FBtr0085246 1 1 1 80 3R 23739082 23739100 TCTTTGAGTTCTTCTCGCC 57 23739144 23739216 TTTGCAGCATAGCATTGAC 57 NA Drosophila melanogaster 61 Hmu FBgn0015737 FBtr0085164 2 1 1 141 3R 23114753 23114844 CTTCAAGGACTATATTGTGACCC 58 23114945 23114963 GTAGATCTCGTTGTTGCGG 58 NA Drosophila melanogaster 61 CG6066 FBgn0039488 FBtr0085131 2 1 1 60 3R 22941724 22941745 GGTGAAGGGTTCTTACATAGGA 59 22941685 22941703 CTTGTGCTTTCTCTTGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085055,FBtr0085056 2 2 2 98 3R 22450526 22450545 AATTGGGAGGATCCTCTCAG 58 22450447 22450465 CAGGGATCTGAGCATTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 2 2 2 109 3R 19585010 19585092 TCATGATGAAGAACGGATGGA 59 19585163 19585181 GTAGAATAACCGGAGGGCA 58 NA Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0290252,FBtr0112485 3 2 2 62 3R 19332878 19332897 GATTCACGATGTCCACTCTG 58 19332835 19332853 ATTGGACAGAGAAGGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trem FBgn0038767 FBtr0083840 1 1 1 80 3R 15855707 15855787 CATCATAGAATTCACACTAAGGAGC 59 15855651 15855670 CTTCAGGTTGTCCGAGTAGG 59 NA Drosophila melanogaster 61 beat-IIa FBgn0038498 FBtr0083453 3 1 1 107 3R 13158293 13158311 CTAAGTTCTACCGTGGCCA 59 13156863 13158222 TGGAGCTGCTTACATCCAC 59 NA Drosophila melanogaster 61 CG31265 FBgn0051265 FBtr0083402 1 1 1 60 3R 12954273 12954291 GATCTACTACACCGCCGAG 59 12954314 12954333 GTTATGCATGTAAGGCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tara FBgn0040071 FBtr0083258 1 1 2 230 3R 12069042 12082508 GTGCACTGAGGTGAATTCC 58 12082702 12082720 TTGTTGGACTCAACAGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3199 FBgn0038210 FBtr0082894 3 1 1 60 3R 9989068 9989088 ATCAAATGTGGCGATTATGCC 59 9989165 9989185 TAAGGTTCCTGTCCAAATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Art9 FBgn0038188 FBtr0082879 1 1 1 81 3R 9769056 9769075 ACGATGTAATCTCCACCAGG 59 9768940 9769014 ACGTCCAGGACTATCTTATCC 58 NA Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100525,FBtr0100524 1 2 2 81 3R 8221541 8221630 GATTACTCGGCAAAGTGGTC 59 8221479 8221497 CGCTTGGTTCTAACCAGGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Sfp87B FBgn0259975 FBtr0300319 1 1 1 60 3R 8099077 8099098 AAGTGCAACGCTATATCTATGG 58 8099116 8099137 TATTTGTAGTACGTAGGAACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 1 3 3 100 3R 7792837 7792917 GATGCAATCCCTGAATGCC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213,FBtr0113212 3 2 2 135 3R 5606165 5606187 CTACAACAACTACTTCATCCACC 59 5607461 5607479 CCGAAACTCCAGAAGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32937 FBgn0052937 FBtr0082089 1 1 1 60 3R 5552402 5552421 TGGTTTAAGTAAAGCGTCCA 57 5552361 5552382 GTTACTTTCGATCATACCCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 2 2 2 81 3R 2897685 2897704 GCCATACTGCAGCATATTCG 59 2897569 2897641 CTTGCAGGACCAAATCGTG 59 NA Drosophila melanogaster 61 CG7442 FBgn0037140 FBtr0078471 2 1 1 85 3L 21931278 21931298 TGAGAAACAGTCTGCTTAGCT 59 21931345 21931428 ATACTTGGCCAGAAGAGGC 59 NA Drosophila melanogaster 61 Cpr78E FBgn0037114 FBtr0078463 3 1 1 148 3L 21659967 21660052 TTAAGATTCTCATCGTCGCC 57 21659838 21659859 GTAAGAGAAGTTGTACGATCCA 57 NA Drosophila melanogaster 61 Las FBgn0029158 FBtr0290266 2 1 1 92 3L 20424610 20424628 TAAACGAACCCGTGAACAC 58 20424479 20424554 CGTCTGGCAAATCATCTCG 59 NA Drosophila melanogaster 61 CG6434 FBgn0036972 FBtr0074844 3 1 1 67 3L 20316255 20316273 CCGTTCTCGTAGAGGTAGG 58 20316144 20316224 GATGTTCAAGTCGCCATCG 59 NA DesignRelaxed Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 1 2 2 80 3L 20005285 20005305 GAACTCCAAGATCACGTACTC 58 20005345 20005423 GAAGTTATTGAACCTTGGTCG 57 NA Drosophila melanogaster 61 ash1 FBgn0005386 FBtr0074970 1 1 1 82 3L 19584577 19584665 CGCCCAATAAACAGATGCT 58 19584513 19584531 TGCATCCAGACACTTAAGC 57 NA Drosophila melanogaster 61 CG9452 FBgn0036877 FBtr0074978 1 1 1 84 3L 19495720 19496437 GGACATGTGACTAACTCAGGA 59 19495656 19495674 AAGGACCCATAAACTCGCC 59 NA Drosophila melanogaster 61 CG42374 FBgn0259720 FBtr0299975 1 1 1 88 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259704 GAATGTACGACCGTGTTGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32199 FBgn0052199 FBtr0075106 3 1 1 94 3L 18606533 18606551 GTTGACTACGTGGAGTTGG 58 18606665 18606746 ATGTCAGATGCGTAGATTAACG 58 NA Drosophila melanogaster 61 CG7589 FBgn0036727 FBtr0075221 2 1 1 80 3L 17465584 17465602 ACAGACCCAGCTAATCCAG 58 17465642 17465724 CCATCAGAGTCGTATTCAAATGG 59 NA Drosophila melanogaster 61 CG13023 FBgn0036677 FBtr0075307 1 1 1 105 3L 16917958 16918032 ATTGAAGCAACAATCCGCC 59 16917871 16917889 AATCTTGGTCTGTGGCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418,FBtr0075420 2 4 4 98 3L 16375505 16375523 ACTGGACGGCCTTTATCAC 59 16375201 16375222 AATTAGATGCCTTGCTGATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 th FBgn0260635 FBtr0075501 1 1 3 119 3L 16033154 16035514 CGACACTGTTTCGACTTCAG 59 16033054 16033074 CCATAAGACGGAAGATCAGCT 59 NA InUTR Drosophila melanogaster 61 mex1 FBgn0004228 FBtr0075602 2 1 1 125 3L 15511424 15511442 GAATGCCTCAAATGTCCCG 59 15511038 15511058 CGTGAAGTAGACAATCAAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17672 FBgn0083978 FBtr0110982 1 1 1 80 3L 13028858 13029025 GAAGTGTGCGAATCCTCTG 58 13029068 13029087 AATGACCAGGAACAGGTAGG 59 NA Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070,FBtr0302207 2 2 2 60 3L 11881378 11881397 ACATATTAACGCCACCATCC 58 11881337 11881360 CTATCCCGTTGATAATACTTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 3 1 1 161 3L 10458354 10458375 CTTTGGACACTGAATCATATCG 57 10458495 10459289 GATAACAGCAAGTCGAAACAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 2 2 2 88 3L 9835626 9835644 GTGATATACCGCTCCAGGA 58 9834652 9835577 GTTGTGCACAATCTTAAAGCAG 59 NA Drosophila melanogaster 61 Ilp2 FBgn0036046 FBtr0076329 1 1 1 87 3L 9792995 9793013 TAATCCCGTGATTCCACAC 57 9793137 9793155 GAACTCCTGGACAAACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Jarid2 FBgn0036004 FBtr0076468 3 1 1 81 3L 9478084 9478167 AGATGATTTCAGGGACATTCAC 58 9478207 9478227 GTCATAACCCAAGGCAAAGAG 59 NA Drosophila melanogaster 61 aay FBgn0023129 FBtr0076457 2 1 1 60 3L 9416842 9416860 TGTTTCGATGTGGACTCCA 59 9416884 9416902 AATATTCGGCCAGTTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4641 FBgn0035967 FBtr0076533 3 1 1 156 3L 9136282 9136303 CCGCTCTATAACATTTGGATCG 59 9136420 9136641 GTCACTGAGATCGTCCTCC 59 NA InUTR Drosophila melanogaster 61 CG13311 FBgn0035929 FBtr0076589 2 1 1 83 3L 8795130 8795210 CTAAGAAACCTATGCCTCATTGTG 59 8795070 8795088 ATTGTTGGCTTGGCAACTG 59 NA Drosophila melanogaster 61 CG6511 FBgn0035923 FBtr0076570 3 1 1 91 3L 8717532 8717601 CCAATGAGAGTGCCATAACC 58 8717653 8717673 AGTATCCAGACAATCTTTGGC 58 NA Drosophila melanogaster 61 mRpL50 FBgn0028648 FBtr0076891 3 1 1 185 3L 7236896 7236970 AAACCCTAATTCTTGCGGG 58 7236670 7236689 CTACGGTTCGAATACGTTCG 58 NA Drosophila melanogaster 61 RpL18 FBgn0035753 FBtr0076892 3 1 1 136 3L 7234011 7234029 AACCACAAGTACGATCGCA 59 7233816 7233834 AAACGCTTCAGGATGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 ImpL3 FBgn0001258 FBtr0077008 3 1 1 64 3L 6253526 6253612 TGGTAGAGTACAGTCCCGA 59 6253480 6253498 GTAGGTCATGATGTCCACG 57 NA DesignRelaxed Drosophila melanogaster 61 CG5568 FBgn0035641 FBtr0077025 2 1 1 145 3L 5864858 5864934 CTGCCCAGATTTCAGTTACAG 59 5865041 5865059 CAAGTGAGTGGTCAACCTG 58 NA Drosophila melanogaster 61 CG13713 FBgn0042199 FBtr0073346 3 1 1 82 3L 4697808 4697826 ATATCCAATACGGTGCGCA 59 4697872 4697890 TTCCGCTTGAACAGTAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15005 FBgn0035508 FBtr0073255 3 1 1 137 3L 4204129 4204147 GTTTAGTTCGCGCTTTGTC 58 4203143 4203161 TGACTCAGTCTTAGGCGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acp62F FBgn0020509 FBtr0072943 2 1 1 60 3L 2739860 2739879 CCTAAAGTTGACTGTACGGC 59 2739902 2739920 TTTCAGGACATGCTACAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vti1 FBgn0260862 FBtr0072607 1 1 1 68 3L 692709 692727 ATAACGGCCCATATTGGAC 57 692595 692613 CTTGCTGCACAAATCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 mthl14 FBgn0052476 FBtr0072501 2 1 1 83 3L 248608 248680 AATCCGTGCAACAGTTCTC 59 248724 248745 GTCGATGATTAATAACGAACCG 58 NA Drosophila melanogaster 61 5SrRNA:CR33377 FBgn0053377 FBtr0086369 1 1 1 60 2R 15644854 15644872 ATACATCGGTTCTCGTCCG 59 15644812 15644830 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33446 FBgn0053446 FBtr0086438 1 1 1 60 2R 15619367 15619385 ATACATCGGTTCTCGTCCG 59 15619325 15619343 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11414 FBgn0035024 FBtr0072307 3 1 1 81 2R 20450481 20450556 CGTGAGAACCAGGAATGAC 58 20450601 20450619 AGCATCAATGCTCACATGG 58 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 2 3 3 80 2R 20398305 20398384 TTCGTAAGGTGTTGGAATCC 57 20398244 20398263 CAAGCAGACTGATGAGTTCC 58 NA Drosophila melanogaster 61 CG3492 FBgn0035007 FBtr0072294 3 1 1 63 2R 20360923 20360941 ACAAGGAGTTCCACAAGGG 59 20360968 20360986 TTGTACCGCTTTGACTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30195 FBgn0050195 FBtr0071931 2 1 1 117 2R 18534598 18534616 GTGTGAGAAGTCTGGAACC 57 18534444 18534463 ATAGTGATTGATGTCCTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15666 FBgn0034622 FBtr0300455 2 1 1 80 2R 17230454 17230530 TGGCTACTACTGGGAACCT 59 17230574 17230592 GCCTCTTCGTACAGATGCA 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 2 3 3 81 2R 14882581 14882599 GAATGTCACCCTACAACGG 58 14882641 14884407 CATAATTTGACCTGATGTGGGA 58 NA Drosophila melanogaster 61 GstE10 FBgn0063499 FBtr0086726 2 1 1 60 2R 14284877 14284895 CAGCTGGACCATGAATTCC 58 14284835 14284854 TATCCGGCTTCAGATGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 2 2 2 80 2R 13679576 13679594 TTCGATATCCGCTCTTTGC 58 13679637 13679719 GCAGCAGGTCATTATAGACC 58 NA Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 2 2 2 87 2R 13300526 13300544 AATTGGAATTTGCACGCCA 59 13300653 13300671 CTTCTCCACAGTACTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152,FBtr0087153 1 3 5 60 2R 12250405 12250424 GTAAGAGTCAGAGCAAAGCC 58 12250444 12250465 CAATGTGGGCATATAAAGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297,FBtr0087296 2 2 2 64 2R 11821705 11821723 TAACTTTCAAGGACTGGCC 57 11821280 11821298 GTAGAAACCTGCCTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11808 FBgn0034000 FBtr0087366 1 1 1 80 2R 11104366 11104452 GTAATATTCCATCCGAACTTCCTG 59 11104491 11104509 TTGGCGGTAATTGTACAGC 58 NA Drosophila melanogaster 61 CG12859 FBgn0033961 FBtr0087440 2 1 1 115 2R 10644160 10644178 AGTTCCTCAAGCAGAGCTC 59 10644335 10644355 GAAGTGTTCGTAGTTGGAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34184 FBgn0085213 FBtr0112377 3 1 1 80 2R 10253448 10253524 CAAGTATCCTCCGATATTGATGG 58 10253561 10253582 CTACTATCATCTCCACCAGTGG 59 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672,FBtr0087673 1 2 2 81 2R 9409615 9409829 CAGACTGAGAGGCAACTACC 59 9409873 9409891 GTCCAGGTACTCCACACTG 59 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 1 6 6 80 2R 8765938 8765958 AAGAACTTCTCGTTTGACGAC 59 8765815 8765902 GATTAGTTGTCCCATTAGAATCAGG 59 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860 2 1 3 60 2R 8648242 8648263 CGAAATATCAGTGAATTAGCGC 58 8647998 8648016 TTGATTTCGGTCAGTTCGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0301195,FBtr0087899 2 2 2 82 2R 8222843 8222862 AATAAGCCCAAGCAAACAGC 59 8222962 8222980 TTAAAGCTGCTCACCTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sln FBgn0033657 FBtr0088032 2 1 1 102 2R 7737360 7737480 TACTCACAGGTATTGGAGGT 57 7737545 7737563 GAAACGCAGATTCCATTGG 57 NA Drosophila melanogaster 61 Egm FBgn0086712 FBtr0088090 1 1 1 133 2R 7505337 7505416 TACAACTGCAAGACCTGGA 58 7505222 7505240 CTCCAGAGTCACATCCTGG 59 NA Drosophila melanogaster 61 CG8735 FBgn0033309 FBtr0088730 1 1 1 117 2R 4485342 4485627 GATGACTCTGATAAAGAGCCA 57 4485245 4485263 TTGTCTCAGTCTCCATTGC 57 NA Drosophila melanogaster 61 CG1942 FBgn0033215 FBtr0088928 3 1 1 94 2R 3600310 3600328 GACTGCAGATACTGGTCAC 57 3600385 3600464 TCCGTAGATCAGTGATCCAG 58 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 2 3 3 82 2R 3390023 3390042 CGACAATCAACCGTGTATCG 59 3390087 3390158 CCTTTGGCATTCGACACTC 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 1 5 5 80 2R 3371064 3371167 GGACTTTATGTGGGATATCGAG 58 3371005 3371023 CAAGTGCGATCTTTCTCGT 58 NA Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 1 1 1 62 2R 2923097 2923115 CATCATTGCGATCTTCGGC 59 2923140 2923549 TATATGAGGAGCCTCACAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Rab2 FBgn0014009 FBtr0086124 1 1 1 82 2R 2585824 2585845 GTTCATAAATACGGCCAAAGAG 57 2585888 2585966 TCTTAATGCCGTTTGCCTC 58 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 2 3 3 136 2R 2554510 2554590 ATCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 RpL38 FBgn0040007 FBtr0111120 3 1 1 265 2R 403815 403892 TTGGATTAATATGCCACGGG 58 403569 403592 CCTTAGCAGTAGAAATATTGAGGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG40127 FBgn0058127 FBtr0111266 1 1 1 91 2R 75328 75347 CCCTCATTGAGGACTTACCT 58 75189 75277 GTAGGCATTCTGATTGTATGCT 58 NA Drosophila melanogaster 61 CR42545 FBgn0260718 FBtr0301174 1 1 1 69 2L 21577312 21577330 TATGAACTAGCCGAGGAGC 58 21577261 21577279 ATACATGACCTGAGCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33903 FBgn0053903 FBtr0091907 1 1 1 60 2L 21439733 21439751 CGTAATTCGTGATGCCGTG 59 21439691 21439710 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 2 2 2 80 2L 21158236 21158317 CTGAATGAGATTAGGGTTCCCT 59 21158177 21158197 GGTGGTATTTACGTAACCTGG 58 NA Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 2 2 2 129 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781806 20781824 GTACTTATCCTTGGTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 tj FBgn0000964 FBtr0301669 1 1 1 60 2L 19465634 19465652 CCACCACTTCCACAATCTG 58 19465676 19465694 ACTACCGTACGAGTTCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17344 FBgn0032755 FBtr0081152 3 1 1 274 2L 19102054 19102073 CAAGGACACCAATTTCGGTC 59 19102369 19102391 CCATCTCAATCGGATAAACTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4935 FBgn0028897 FBtr0080825 3 1 1 91 2L 16263172 16263273 TTCGCATAAGTGATAATGGCG 59 16263326 16263344 ATACATGTCCCGTCGTCTG 59 NA Drosophila melanogaster 61 TepI FBgn0041183 FBtr0080811 3 1 1 82 2L 15891399 15891419 TTGGTGATCCTAACAAATGCG 59 15891221 15891306 GTACAATTAGTGTAACCAGGATTGG 59 NA Drosophila melanogaster 61 CG9014 FBgn0028847 FBtr0080579 1 1 1 138 2L 13723180 13723198 GATCAAGTGCACCTTCTCG 58 13723002 13723078 CTTGGGTACCTTCATTCCG 57 NA Drosophila melanogaster 61 CG9377 FBgn0032507 FBtr0080474 1 1 1 80 2L 13360783 13361275 CCGATAAACTCCCGACTCC 59 13360721 13360741 GGTAGTACCAGAGATCATGGC 59 NA Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 3 2 2 84 2L 13351382 13351466 CATTATCGGGTTTGTGAATTCG 58 13351319 13351340 GATTCACATACTTTGTGGTCGT 59 NA Drosophila melanogaster 61 CG16824 FBgn0040973 FBtr0113336 3 1 1 79 2L 13293070 13293088 CAAGTCAGAATGGCTGGAC 58 13293129 13293149 TCGTCTAGATTCTTCGAGTCC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG5945 FBgn0032494 FBtr0080450 1 1 1 90 2L 13240702 13240772 TAACGCTCTTGGATGTGGA 58 13240826 13240844 TCGATATTCTTGAGGCGGA 58 NA Drosophila melanogaster 61 CG15484 FBgn0032452 FBtr0080406 1 1 1 60 2L 12707435 12707454 CAGATCGCCTATGAACTGAG 58 12707394 12707412 AGGTATGAATGGGAACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dnz1 FBgn0027453 FBtr0080181 3 1 1 151 2L 10855447 10855662 TTGCGAATGATTCACTCGG 58 10855314 10855332 CGATTTGGACGATAGGTGC 58 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 3 1 1 86 2L 10704074 10704150 CATAATGAAGACAGCTGTGGA 58 10704198 10704216 ACTAGAGATTGATCGGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31872 FBgn0051872 FBtr0080099 2 1 1 93 2L 10642856 10642875 ATCTGCAACAAGCTTATCCC 58 10642927 10643007 GGGATAGTGTCATATTGAAGCTG 59 NA Drosophila melanogaster 61 CG13110 FBgn0032111 FBtr0079805 2 1 1 60 2L 9350694 9350718 GGACTACAGGGATTATTTCAAAGAC 60 9350734 9350754 GGTAAACCTTATCGGCTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 1 4 5 86 2L 9272530 9272551 CGCATTAAAGAAGCAAATCGAG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700,FBtr0079699 3 2 3 114 2L 8493050 8493068 CGCTGGCTATAACGAACTG 58 8492790 8492973 GGTTCGTTTGGAATTCTCCA 58 NA Drosophila melanogaster 61 CheA29a FBgn0053194 FBtr0079676 3 1 1 61 2L 8477382 8477400 TAATCCTGTGGACGGTCTC 59 8477477 8477497 TCGACTGATGAACTTCTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13386 FBgn0032040 FBtr0079661 3 1 1 96 2L 8399364 8399456 CAGTGTGGGTCCTTATGGA 58 8399516 8399534 GTACTCGTAGGGATACGGG 58 NA Drosophila melanogaster 61 fos28F FBgn0013442 FBtr0273229 2 1 1 122 2L 8180750 8180770 AATCTGACTCCAAATCTTCGC 58 8180854 8181070 CTTATCCGCCGACATTTGC 59 NA Drosophila melanogaster 61 CG31607 FBgn0051607 FBtr0079579 3 1 1 130 2L 8154038 8154165 AAGAAGAGGATCAGGTTATTCC 57 8154256 8154274 ACAATGTGGATGATCTCGC 58 NA Drosophila melanogaster 61 CG11236 FBgn0031860 FBtr0079339 3 1 1 80 2L 6803870 6803950 GCAACTATATTATACCCAACACCG 59 6803986 6804007 GGCAGACTTTAGTGTTGTAGTC 59 NA Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 2 1 1 93 2L 6264417 6264435 TTGATTCTCCTCGCCACTC 59 6264285 6264360 GAACGATCTTGGAGAAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3008 FBgn0031643 FBtr0077389 3 1 1 129 2L 4884219 4884239 GATGATAACAAAGCACGATCC 57 4884327 4884399 GTTAAACACCTTATTGGAGAGC 57 NA Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 3 1 1 64 2L 2652060 2652138 GTTTGCAATGGAAAGCGAC 58 2652014 2652033 ATCACACTCTCCGTAATTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 2 3 3 69 2L 1985519 1985537 CCGATACCGCTACTACGAC 59 1985399 1985489 TTTCTTCAGATCCTCGATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 BBS8 FBgn0031255 FBtr0078058 1 1 1 80 2L 424756 424836 AAATGGCGTTGATGTACTACC 59 424877 424896 AACACAGCGCTATATTGCAG 59 NA Drosophila melanogaster 61 CG33635 FBgn0053635 FBtr0091612 2 1 1 159 2L 158529 158550 GAAGAAACCAAGTTTCAACGTC 58 158331 158349 CATTCCTAAACAGGCCACG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 1 6 6 80 2L 14976 14997 AATTATGTGCCTTATGGACCTG 58 14859 14938 AATTACATCGTTGGATCTTCGC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 3 3 10 97 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111112 112704 TCCAAACATGATACCCTGGTC 59 NA Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 3 2 2 80 2L 411178 411200 CTACTCTATTCGTGAGGAAATGG 58 411052 411141 TCCACATACCAGGTATAATCCG 59 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 2 2 2 81 2L 1117494 1117512 ATCAGCAGCCAATATGTCG 58 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA InUTR Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 2 1 1 78 2L 1165062 1165080 GACAAGGTCTCACTGAAGG 57 1165180 1165198 GATTGGGATTTCCCTCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077765 3 1 2 80 2L 2376136 2377143 TTAACGACGTGCTTTAAGGG 58 2377185 2377204 CATTCCGGATAGAAGCTGTG 58 NA InUTR Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077772 1 1 5 99 2L 2450318 2455067 TGTCAGATAGTTGCAAGCG 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 2 1 1 61 2L 2848431 2848449 GGAAGTTCCTCGCCTACAG 59 2848533 2848551 CGATACCGCATAGTTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230 1 1 3 80 2L 2995062 2995422 ATCCTTCAGACACTGAAGGG 59 2995465 2995483 GATCAGGTCCAGGTACGAC 59 NA Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 1 2 2 80 2L 3067314 3067393 ATCGCCTTAAGGAGGTCTG 58 3067437 3067455 GATCCTCGATGAGGAAGGT 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 2 6 6 91 2L 3070720 3070831 AAAGGAGAAGGAAATCCAGCA 59 3070649 3070667 CTTTGTCATACGTCAGCCG 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 1 5 6 80 2L 3071761 3080666 GTTCATGTCCAAAGAGCTGG 59 3071700 3071718 TTCTCTAGCGTTCCCTTGG 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 3 2 3 90 2L 3292518 3292536 TGAATCGCTCATCACTCAG 57 3292288 3292465 ATCTATCAAGGCTGTCTCCT 57 NA Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 1 2 3 194 2L 4372532 4378919 AACAGATTATCTATCCCGGTCC 59 4379074 4379092 GATCGGTCATCATGATGCG 59 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077381 1 1 2 91 2L 4795868 4795886 CTCCAAGGTCGCTACTACG 59 4795940 4796075 GTTAAGGACAAACCGCAGAC 59 NA Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 1 1 1 71 2L 4826527 4826547 ACCGATAATTCTCCATTTCCC 57 4826641 4826659 AATATGCCTAGCGTTTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 1 4 4 62 2L 4904915 4904939 CTCCATCTTATCCATAGTTTACTCC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394 3 1 2 81 2L 4935903 4936124 AGAGAATCCATGGTTCCTCC 58 4935841 4935861 CTGACGTTCTTCATATCCACC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 3 4 11 87 2L 5004201 5004626 ATACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 3 2 2 193 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051389 5051407 AATTGTGCGATATGCTGGG 58 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 3 3 3 81 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079146 2 1 3 96 2L 5947246 5947264 CCTGTTCACGGCTATTCAC 58 5947323 5947866 GGACGTATCCATATGCTCAG 57 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 2 1 1 60 2L 6021136 6021154 TGCGCAACTTTGGTTATCC 59 6021228 6021248 TGTCCATCAATGTAGTTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 2 5 5 132 2L 6924279 6924299 TGGTTATCATGTACGACCAGG 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0302162,FBtr0290119 3 2 3 119 2L 6973655 6973673 GGTAAGATGAGCACGTTGG 58 6973489 6973576 GCTATCACTATCACTCTTCTCCT 59 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 3 2 3 105 2L 7041151 7051378 ACTATTTCCTTCTATGCGGCA 59 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0079405 2 1 2 100 2L 7182810 7182828 GAAGATAGCGAGGACGAGG 59 7182889 7183173 TACTCAATGATCTTCCTCTCGC 59 NA Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 3 2 2 80 2L 7447294 7447517 TCATGCACAAGGAAATGGC 59 7447232 7447251 CCAGACTGAGATCAATTGGC 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 2 4 5 81 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682044 7682122 CCTGTTCCATCTTGAAGATATGTC 59 NA Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 1 1 1 90 2L 7783878 7783896 CCCTGGGTTTAATAGGCAG 57 7784003 7784021 TTAAGGGAGTTGGCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493 3 1 2 83 2L 7799364 7799382 ATGTGGACTCCGATCTCTG 58 7798614 7799317 CCTGGATTAACGGTTTGCC 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 1 2 3 81 2L 7986007 7986025 AAGCTCGACTTCAAGTCGA 59 7986070 7986151 GATACGTGGTAGGGTTCGG 59 NA Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 2 2 2 81 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195911 8195931 GTGGGTGTAAATGATCTGCAG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 3 3 9 120 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226494 8226512 TACTGATTCAACGTAGGCG 57 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 3 3 3 81 2L 8928732 8928996 TAAAGCGAGCAGATCTTCC 57 8929040 8929059 GGAGTTGCCTTAGGTTTCTC 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 7 7 84 2L 10259083 10259102 TGTTGATATGTGGCTCAAGG 58 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 3 2 2 83 2L 10365673 10365783 GCATTCAGATTCATGCTGGAG 59 10365828 10365846 GTGAAGCAGTTGGAACACG 59 NA DesignRelaxed Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100488 2 1 10 92 2L 10817137 10822978 AGTTTACAGAGACGGTGGC 59 10817063 10817083 CAATGTTCATCTCCACCACAG 59 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 1 3 3 80 2L 10848458 10848552 TCAGTCTGGAAACAAGAACG 58 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672 2 1 2 91 2L 10919386 10923154 TGTCATAGTCGAGCCTCAG 58 10919313 10919331 TTGACCGGAATACCTTGGA 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 2 3 5 81 2L 10990711 10990729 ATGTGGACAATAGTCCGGA 58 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 1 2 2 80 2L 11095997 11096017 GTTCTACTGTCGCTCATTCAG 58 11095862 11095957 TGCCTCGTTGAGATATCTCTG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 1 4 4 80 2L 11143208 11143227 CAACCACAAAGACCCTTTCG 59 11143081 11143168 CACCAATGAAGACATAGATGCG 59 NA Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 2 2 2 96 2L 11852015 11852091 TTTAAGCGGTCCTATCCCA 58 11852150 11852169 GCTGGCTAAGAAACTCTGAG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 1 1 8 94 2L 12477159 12482572 CTTTCTGCCAGATGCATCTG 59 12458193 12458211 CCGCTATCATGAGATGCGA 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 3 3 9 176 2L 13274016 13274036 AGAACTTCGGATCAAATCCAC 58 13274365 13276255 CTCCATTACCACCAAAGTTGG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139,FBtr0089910,FBtr0113040 3 5 9 111 2L 13275766 13275784 AATAGTCCGACCATCGAGC 59 13275859 13276258 AGACTCCATTACCTTGCGG 59 NA Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 1 1 1 75 2L 13436773 13436794 ATAGACTGACTAACTTGTCGAG 57 13437958 13437976 GAGTTCTTGTTCAGACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514 1 1 2 193 2L 13547154 13547762 CCTTTGCTCAGACGAAGTG 58 13546979 13546997 GTATCTGTGAGTGCTGCTG 58 NA InUTR Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 1 3 3 83 2L 13897288 13897306 CAAGAGATGTGCGAACTCC 58 13897353 13897435 TTGCGCCATTCCATATGAG 58 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 2 3 3 105 2L 14357443 14357527 CCGAGAAGAAATTCATGGCC 59 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 3 5 5 160 2L 14977341 14977359 ATGAAGGCTTTGACAGGTG 58 14977068 14977218 ATAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080904 2 1 16 99 2L 16771052 16771070 AGAAGGCTCGTGTCATCTC 59 16771130 16771951 AGACAGTATTCTTTAACACCGG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 2 10 16 118 2L 16779838 16780560 ACACAAAGGTGTTCTTCCG 58 16780642 16780660 CTTACGGGACAGGTAACCA 58 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 2 2 2 134 2L 16800512 16800611 GTTCTATGACCGTCTTTGGAG 58 16800707 16800725 ATTACTCCAGGCACATTCG 57 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 2 2 2 81 2L 16986134 16990244 GGACATGATTGTTGTGGTGAC 59 16990287 16990305 GACCATGTCGCCAATTTGG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 3 4 5 107 2L 17439290 17441811 AATGGACTCAGATCCAGCG 59 17439201 17439220 TGGTCATTCTGCAATTGCTG 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 1 2 5 186 2L 18387306 18388391 CACAAACGAAACTCAAATCGAC 59 18388538 18388556 GTGATGGCGTCTTTCAACC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 3 2 5 195 2L 18387306 18388391 CACAAACGAAACTCAAATCGAC 59 18388547 18388565 ATCTTCATCGTGATGGCGT 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 3 4 4 110 2L 18827244 18827517 CACTATTAGCTTAGAGGACTTCGA 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081170 1 1 2 144 2L 19081985 19082930 GTTCTTGCTATCCACAATCCC 59 19081861 19081879 GAAGCACTTGTCGTTCAGC 59 NA Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 1 2 3 139 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123427 19123445 GAAGCGATCGAAGATGACC 58 NA InUTR Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 1 2 3 110 2L 20061916 20061934 CAGGCCTCCAATATCTGGA 58 20062008 20062161 GTCGTTGTTGAGATCCAGC 58 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0112884 3 1 5 95 2L 20356717 20356735 CAATAATCCCAGCTTGCCG 59 20356794 20356886 TGTTGACTCAGATGAGCGG 59 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 1 2 3 80 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790649 20790669 CAATCCAATATCCCTGCATGG 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 2 3 7 141 2L 21125430 21126168 AAATCATCACCTGACTCGGA 58 21126271 21126290 TATCTGTGTCCGGATTGTCG 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503 2 1 3 81 2L 21138354 21138725 AATCTCTTGATCAGGAGACGAC 59 21138294 21138312 TGGTAAACCTGCTCCTGTG 59 NA Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 1 2 2 80 2L 21158237 21158317 CTGAATGAGATTAGGGTTCCC 57 21158177 21158197 GGTGGTATTTACGTAACCTGG 58 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173 3 1 2 134 2L 21578834 21578852 GTATGAGAGGTACGCATCG 57 21578517 21578736 TCAAACTGCAGAAATCGCA 58 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 1 3 3 80 2L 21681386 21681405 GAGACTCGTTTCACTGACAC 58 21681266 21681346 AAAGTACATGGAAATGGCAGTC 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 2 3 5 170 2R 614797 614817 CACAAATTCTTGACGTCAGCA 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0086030 2 1 3 96 2R 1867139 1867449 CTGTGACCAATTTGATTTGAGC 58 1867064 1867083 CTTGTTTGAACCCGACTCAC 59 NA InUTR Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 3 4 4 79 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515389 2515407 GGTACCAGACTTAGCAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 1 2 2 105 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579703 2579721 CTCGTCCAGACTCATGAGG 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301422 1 1 7 103 2R 2622403 2625473 TCTGTTCTACAAACAGCAATGC 59 2622321 2622341 GTATCTTCACAAACCCGATGC 59 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 2 3 3 87 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2751999 2752017 CATCAGACCAATACCACGC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 3 2 11 110 2R 2764805 2764824 AAATGCTACAAAGTCCGGAG 58 2764020 2764732 TCATAAACATACCCGTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 2 3 59 83 2R 3247002 3247020 CACCTTAAGGGAAAGAGCA 57 3236471 3246958 CTTGTACCATCTAAAGAAAGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 2 2 59 81 2R 3225659 3235366 GTGCAAGTCATGGTTCCAC 59 3225596 3225614 TGACCGAAACAGAGTCCTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111058 1 1 59 80 2R 3219879 3230480 TGCTCGTCAATGTACCTCC 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 3 3 3 120 2R 3389126 3389144 ACTGGAGAAGTCACGTGTG 59 3389226 3389311 GAATTTGTCCTGGTGATCCAG 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089743 1 1 3 158 2R 3390386 3390404 CAAGGAGTTGACGCAAGTG 59 3390526 3390687 TCATTCCCTTGCTGTTTGC 59 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 3 2 3 154 2R 3613395 3613413 GCCTGAATTCGTACAGCAG 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088889 2 1 2 163 2R 3803412 3803432 ACTGCTGCTTATTATGAGGGT 59 3802678 3802908 CCTGAACCAACTCGAACAG 58 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0300954 1 1 2 80 2R 4004715 4004733 GAATCTGCCAAACGAGGAC 58 4004509 4004672 ATTGGACTAGAACTGGAGCG 59 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299788 1 1 2 80 2R 4462506 4462590 ATGAGAAGCACAAGAAACTCTG 59 4462447 4462467 AAATCACTTTCTTGATGGCCG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 1 4 4 105 2R 4645019 4645095 CCAAGGAGCTCAATGTATCC 58 4645163 4645181 AAGAAGCGCAGATTCTTGG 58 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 1 2 4 82 2R 4757945 4758444 GACACAATGAAGAGAAAGTCTACG 59 4758485 4758503 AAAGACGCCGACTATGTCC 59 NA Drosophila melanogaster 61 CG33199 FBgn0053199 FBtr0088688 3 1 1 157 2R 4838211 4838229 CCGTTTAACCTTCGGTCAG 58 4836308 4836326 TAAGGCTGAACGAGGACAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 2 4 12 80 2R 5003946 5004692 CCAAGTACAAGGAATGTGAGC 59 5004732 5004752 AGATGTTCAGAAACGACAGGA 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088604,FBtr0112897,FBtr0088602 3 3 10 97 2R 5144979 5144997 TGTATCGTGGTAGCAACGA 58 5143200 5144920 CAACTGTGGTATAACCTCCAC 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672 1 3 4 96 2R 5457654 5457729 ATCACGTAAGGTCATGCGA 59 5457576 5457594 TTCTGTTGCGTGTACAGTG 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 1 2 2 90 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848324 5848343 GCCTTGTCGAAACTTACAGC 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 1 4 5 82 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949138 TTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993536 5993555 TGGCCCTTAACTTCTCAGTC 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943 1 1 3 126 2R 6021509 6022783 TACAGTCCCGAATACGGGA 59 6022873 6022891 CTCGTTCCGTATCTGACGT 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088344 1 1 17 80 2R 6187764 6192140 ACCTTTAAAGACGTGAACATCC 59 6192181 6192199 GGCTAGTTCCTCTTCCGAC 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089346 3 1 26 80 2R 6389915 6389934 GGATTCGAGTCCGTAATTGG 58 6389726 6389873 TATGTAAGACTGAGGGCTCG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214 2 1 2 111 2R 6604804 6604823 TAAATGGAGGATCCCGACAC 59 6604897 6607313 ATATTCCGCTCGGTATCCG 59 NA Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198 1 1 2 80 2R 6792368 6792509 CCACAGGATGAAATCCTTTCC 59 6792546 6792569 GAAACCATTCAGAGGATAACTCAG 59 NA Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 1 2 2 72 2R 7157767 7159891 TCTTAAGTGGGCTCTGGTG 59 7157713 7157732 GGGCAGGTATTTGTTATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 2 4 5 80 2R 7199287 7199308 CCTAATCACAGCCATTATCCTG 58 7199176 7199247 CAGTAGCGTCTGTATCCCAG 59 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 2 2 2 92 2R 7344228 7344316 GTTTACCTACCGACTCGAC 57 7344372 7344390 TTTAGCATCCGAACAAGCA 57 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113072 2 1 2 94 2R 7765780 7765854 CCAAAGTAACTACAGAGGCAC 58 7765706 7765728 AACCTCGATGATCTTACCTAGAG 59 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071 1 1 2 81 2R 7759542 7759562 TGGAAACTGCTGTTAAGTTGC 59 7759430 7759502 CTTGACTGCTGTTTAGGATCAG 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 2 2 4 114 2R 7784184 7784205 GGAGTCTGGATAGTTAGCTACC 59 7784028 7784111 TACGACAAATCTCGATTGCAC 59 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 3 3 3 123 2R 7855431 7855450 CTGTATTCACGGGAAACTCG 58 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 2 4 4 81 2R 8467283 8467301 CTCGAATACGTTCGAGGAC 57 8467118 8467238 GGAGACAACCTTATCCAGC 57 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 3 4 4 81 2R 8467280 8467298 GAATACGTTCGAGGACACG 58 8467115 8467237 ATTGGAGACAACCTTATCCAG 57 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 2 3 3 92 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527568 TGCGGAGAAGCTCTTATAGC 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 1 3 6 83 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548627 8548645 GACAGGATGACGATCAGCA 59 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507 3 1 2 80 2R 9029315 9029616 TTAGCAAACGAAAGGTCGT 57 9029657 9029678 AATTTGAAGGACTTCTCCTCAG 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 1 12 12 85 2R 9306901 9306985 GCAACCTCGTTTATACTTACGT 58 9306837 9306855 CAGATGGGTAAGCCAGGTC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 2 5 12 80 2R 9310225 9326126 GTCTCCTGAATACCTATGACG 57 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 1 1 1 60 2R 9731508 9731527 CAGAAAGCGTTATGTCATGG 57 9731396 9731417 GAAGTACATGAATGTCCAGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 2 10 15 149 2R 9752989 9753574 ACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 2 3 3 80 2R 9835604 9835689 CGTGCCAGATATCATCTGGT 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 1 3 4 84 2R 10661506 10662485 ATTCCACGTCAAGGGTCAG 59 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560 1 1 4 80 2R 10753230 10755001 GATTTAGAGAAACGAACACCAG 57 10753171 10753189 CTGCGAGGAAATAGACGAG 57 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560 2 1 4 80 2R 10753229 10755000 ATTTAGAGAAACGAACACCAGC 59 10753170 10753188 CCTGCGAGGAAATAGACGA 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 3 4 7 164 2R 11669314 11669334 ATCTATTGCGGAAACACTCTC 58 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 3 8 13 84 2R 11837967 11838677 ATCTGGTACAAGGCGTGTC 59 11837901 11837919 TGATGTAGAGCGTCGACTG 59 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219 1 2 3 157 2R 12000326 12000344 TGACGACGAATTTGAGTCC 57 12000463 12002285 GCTTTATTTGTGATGCCAACC 58 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114472 2 1 3 127 2R 12085836 12086002 ATAAGAAGATTTCCGGCACTG 58 12086091 12086109 AATATAATTGGCCGGCTCC 57 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114472 3 1 3 180 2R 12085836 12086002 ATAAGAAGATTTCCGGCACTG 58 12086144 12086162 TTGACATCAACCAGGTTGC 58 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 3 5 5 83 2R 12093319 12093421 GTGAAGTGAAGAAGGCATATCG 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 3 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087088 3 1 4 80 2R 12391125 12412886 GAACTTTCACCAGATCATGTG 57 12412925 12412946 ATCTCGATCTTCGTTCATATGG 58 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 1 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0112819 2 1 3 107 2R 12824023 12827603 CTCAAGTGTCGAGCATGTG 59 12827674 12827692 CTCCAGATAAATGCGACCC 58 NA Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 1 2 2 129 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885786 12885806 CTTCCATATCTGTAGCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 1 3 3 80 2R 12905299 12905582 CATTGCCTTAACCAGAATCCG 59 12905239 12905257 GTTGTTCTCCATGCCATCG 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 3 3 4 85 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311216 13311234 GCAAGCCATTGCTTAGGTC 59 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 1 5 5 172 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400427 13400445 CTCAGAGTGGGTCAGATCG 59 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 1 2 2 80 2R 13477350 13477422 CTGGAGAAGAATCTCACCCA 58 13477289 13477307 GATGTGCATCCGAAGTTCG 59 NA Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 1 1 1 77 2R 13934535 13934553 AACAGCGACAACGATACCA 59 13934295 13934317 GCCATAGATCACAGATACATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 1 1 1 60 2R 13939179 13939197 GCCTGGAATTCTTCGACTG 58 13938850 13938870 GTGAACATAACCTTGTAGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 2 1 1 60 2R 13939178 13939196 CCTGGAATTCTTCGACTGC 58 13938849 13938870 GGTGAACATAACCTTGTAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 1 2 4 80 2R 14018837 14018856 TGAGTTGGAAACACTGAAGG 58 14018540 14018795 TCGTTAAACAGACCCATGAG 57 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 3 3 8 97 2R 14311984 14312387 AGCACTGTATACCAACGCA 59 14312448 14312466 AGTTTCGACGAAATGCCAC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 3 5 5 96 2R 14843623 14843771 CATCGTGAGACTCGTTCAC 58 14843831 14843849 TATCCTGTCGATCTCCACG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 1 8 12 80 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064237 15064455 AAATGACGTTAGTTCCATGGAG 58 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086508,FBtr0086509 3 2 4 103 2R 15129200 15129218 CAAGAACATCGATGGCGTG 59 15129285 15129691 GTGTAGCATCAGCCTTGTG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 2 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286541 ATCCTGGAACTCTTTACTGC 57 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 2 3 3 94 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148398 AATGTTCTTGGTCTTCGAATCG 59 NA Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 3 2 2 67 2R 16151892 16151911 CGATGTCGATCTTACCAAGC 58 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 3 2 5 87 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212364 GGATGAATGGAGCTAGCCA 59 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 1 2 3 96 2R 16215632 16215845 CATAACAGATCCCTCATTACCC 58 16215900 16215920 CTTGTCCCAATAATCGTTGGT 58 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 3 4 4 91 2R 16557770 16557788 GCGATAAAGTTGAGCTGCC 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 1 2 15 80 2R 16908772 16908790 TCGGATCACAGAACCACAG 59 16909015 16910578 CCGTAACAATTGTCTGATGCT 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 1 2 2 80 2R 17009342 17009360 GTTGCCATGAACACGAGTC 59 17009402 17009519 CTCTATGAGATCAGCCTCCTG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 3 2 8 135 2R 17185984 17191400 GCCAGCCAGAACATAAATCG 59 17191495 17191516 GATCATCGATGGTAAGATGTCG 58 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071661 1 1 2 164 2R 17540061 17542290 GTACAAAGGCGTCATGCAG 59 17542480 17542498 TGTCCATTCTTGTGCACCT 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776 1 1 2 118 2R 18158445 18168184 GGAAGAAGCCAAATCACTTCC 59 18168264 18168282 TGTCGGTCTCGATATTGGG 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 1 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213337 18213357 CGTAGTCATATTGAGAGTCGC 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0302117 1 1 8 80 2R 18615275 18616646 GTGAAGAACTATTCCAGCTACG 59 18615216 18615237 TTTCGTGTAGCGATTATGTCAG 59 NA InUTR Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 2 8 13 141 2R 18813126 18814633 GGCTTATAATATTGTTCTGCGG 57 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0113464 3 1 2 80 2R 19900367 19900444 AAGTCAAGATGCTTTGTGCG 59 19900306 19900328 GAACTCTAGTATATCGATGGGCA 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 1 2 2 104 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183363 20183439 TGGAAAGCCTTTAGGTCCC 59 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 3 3 3 249 3L 224169 224977 AACTACGAAGTGAAGTCGCA 59 225772 225792 CGACGTAGTTTCTTGTTTGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 1 2 2 63 3L 258743 258763 GGACGTAGTTATGTTGGAGAG 58 258847 258865 GACGATATCCGGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0113121 1 1 2 93 3L 991029 991098 TCCTGCGCAAGAAATTCAC 59 991154 991173 CGCCACATGATTAGTCTTCG 59 NA Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 2 2 2 82 3L 1314022 1314040 AAAGAGCTCTATTGCTGGG 57 1314086 1314171 CTAGGTGTGAGGATCTGCT 58 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 3 4 4 81 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326126 1326210 CAATGTAGGTATAGATCAGGTCCT 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 3 2 3 86 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573760 1574007 AGCCGAGGTTACTTCTGAG 58 NA Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 1 2 2 132 3L 1624585 1624677 TGTAATAGGCATGTTTCCCTG 58 1624473 1624491 GGAAAGCTCTTCCTCTGGA 58 NA Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072799 3 1 2 81 3L 1720163 1723592 GCCTGCGATATAAATTGCCC 59 1720101 1720119 CACATACCGCGTTGTTCAG 59 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072957,FBtr0072956 3 2 5 161 3L 2558380 2560124 AGTGAGGAGTATCAAGCGG 58 2558237 2558255 GAGCGATATCGTCGATTGG 58 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0072977 3 1 2 84 3L 2962471 2962564 GACATAATGTTACCTCTGCCA 57 2962604 2962628 GGTACATCTGTATATGATAGTAGGG 57 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073072 2 2 4 165 3L 3366082 3366101 GCCAGGAGAATCTAGTTGTG 58 3366302 3366453 GGCGGATTATCCGATTGTC 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204 1 1 2 143 3L 3613953 3614080 GATGAAGGATATCTCGCGC 58 3614187 3614205 CTGAGAGCAGTAGAAGCCA 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0112845 2 1 4 80 3L 3834557 3834576 ATTTCGAATGTGCCAATTGG 57 3834619 3836031 GTAAATGGAACCGTCTGCA 58 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564 2 1 3 121 3L 4195604 4195624 GCAGAAGTCTCTAAACTCGAC 58 4195705 4195850 TACCATTGCGCAAGTTATCAC 59 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 1 3 3 62 3L 4262983 4263002 AAATGAATCCCTTGATCGGG 58 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 2 2 2 84 3L 4291805 4291887 GAAGGGAGAACATATTTCTGATGAG 59 4291745 4291763 CATTAGGAAGCCCACAAGC 58 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 2 2 5 122 3L 5160148 5161358 CAAACAAATGTTACGGCTTCG 59 5160046 5160065 TATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076951 3 1 3 112 3L 6740079 6740211 AACGATGAAGATTTCTCCCGT 59 6739987 6740005 AATCTGTAGGGCACCAGAC 59 NA Drosophila melanogaster 61 melt FBgn0023001 FBtr0302044 2 1 2 104 3L 7134689 7134813 TTGCAGCATTGAGGTTTCC 59 7134881 7134899 TTGGAGTACAGGCAATGGG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 1 5 9 181 3L 7160482 7160500 GTATGGCAATGACCAGCAG 59 7160240 7160338 CAAACAAAGGATCTGCCTCG 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 2 2 2 80 3L 7755940 7756021 GGAGAAGACCATTAAATTTGCG 58 7756059 7756080 ACCTCAACACTCTGAGTATAGG 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300500 2 1 7 128 3L 7823584 7823602 CAACAATGTGTCCTCCGTG 59 7811311 7823492 GATGTGGATTTGCCTGAGC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076774 1 2 5 120 3L 7891946 7893189 CATGGCAATGGTGGTTGAC 59 7891844 7891864 CTCATTGGCATAGCCATTCTG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817 3 1 5 106 3L 7902329 7902349 CTCCTATTTCACATATGCCGC 59 7900421 7902263 GCGTTGTTATGGACATCTCTG 59 NA Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 3 2 2 81 3L 8301246 8301264 GGTTAGCGTCATCAACACC 58 8301056 8301201 AAGTTGAGTCACTTGCACG 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076669,FBtr0076670 3 2 9 217 3L 8351829 8351848 TTGGTGACAAACACTATCGT 57 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 3 2 2 84 3L 8397257 8397277 GCATAGAGAAGGAGATGAGGG 59 8397141 8397211 ATGTCGCTCTCCTTCAGTG 59 NA Nonspecific Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 1 1 1 68 3L 8409963 8409984 GCAACATATACTCTTCGCTGTG 59 8409860 8409878 TTTGAATGGACTTGCGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 3 4 5 115 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586655 8586674 CTAAGCGGTAAGTCGATGTC 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0300426 2 1 5 122 3L 8581816 8581834 TTTCTCACGTCGAAGACGA 59 8581916 8582049 AGTCAAATAGGTTAGAGCCTCTC 59 NA Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 2 1 1 107 3L 8592952 8592970 ATTAACGATGCCTCCTCGT 58 8592799 8592820 GAAGTCTTCATCGTATTGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 3 5 13 84 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627739 8627757 CAAGTAGGACTCTGTCGTG 57 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 3 2 4 109 3L 8960517 8960535 GACGGTGAAGAACATCTCG 58 8960605 8960675 AGGATTCAGAGTTCTTTGACTC 57 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526 3 2 5 109 3L 9078840 9078858 ACAGTTTATCCCAACGCGA 59 9078927 9079007 GGTGTCGTGAATAATGTTAGTCG 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 2 2 4 128 3L 9346990 9347008 TCGGACGTTTCATTCAGGA 59 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 1 2 3 142 3L 9360648 9360666 CTGCTCCAAGTGTTTCTCG 58 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 2 3 8 184 3L 9817719 9817740 GAAGAACAACAAGCCAAATGTG 59 9823878 9824110 TAAATGGGACCCTGAGGTG 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 7 8 96 3L 9817654 9817674 TCGACGATCAAATAACGAAGC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 1 2 4 94 3L 9894108 9894450 TTCGCTTAAGAATCCCGAG 57 9894508 9894526 TTCTTAACATGTCGGCCAC 58 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303 1 1 3 80 3L 10216049 10216070 ATGAGACTAAATAAGTCGGCCA 59 10215173 10216011 AATTCCGGTAGGTATACTCCTG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 2 2 5 121 3L 11219889 11222218 TACCTTTCGAAAGTGTGCT 57 11222303 11222321 ATACTCGGAGGATTCACCA 57 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 3 2 5 122 3L 11219889 11222219 TACCTTTCGAAAGTGTGCTG 58 11222303 11222322 CATACTCGGAGGATTCACCA 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 2 3 5 127 3L 11219783 11219802 ACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 1 1 1 94 3L 11822642 11822660 CAAACAGCGTCTTTACGGG 59 11822774 11822792 TCTTGTCGCACTCCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 3 4 6 119 3L 12205860 12206204 TTCTACGACGAGTCCAATCC 59 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 1 2 2 104 3L 12698331 12698349 TCTGAAGGAGAACCTGGTG 58 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354 3 1 2 173 3L 12747711 12747788 CTAAGCTTGCAGAATGTTCTG 57 12747233 12747252 GTTCAAGATCACCAAAGCTG 57 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 1 3 4 103 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13462076 13462095 CATGTATGGCGATGATGTGC 59 NA Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075811 2 1 2 181 3L 13489234 13494005 CAGTTGCACTCAGAGATGC 58 13494150 13494168 GTCACCGACATGTCAATGG 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422,FBtr0273427 2 2 7 80 3L 14500764 14500783 GAAGGTACGAAGGATGTTCG 58 14410285 14500723 GGTACCAAGATCTGATTCGTG 58 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 2 3 3 80 3L 14620524 14620543 TTGCTATGTGACCTTTGGAG 57 14620586 14620664 CATGGAGTCAAATCACCGA 57 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099992 2 1 2 80 3L 15074769 15074787 AGGCAGATGACTCCTTGTG 59 15074556 15074727 GGCTATATCCGCAGTATTGTC 58 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 3 2 2 83 3L 15551210 15551361 AAGTGACTGTGACAGATCGT 59 15551405 15551425 TAAGGTCAATGGTCGAGTCAC 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075538 1 1 4 110 3L 15818647 15818665 ACTGATCAATAACGCCGTC 58 15817074 15818573 AACGCTAGATTGTTGACGT 57 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 3 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 2 2 2 86 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774824 16774842 CTTCTCATACTTGGGCGGA 59 NA Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 1 1 1 64 3L 17799085 17799104 AGTTCGAGTCCTACCTTCAC 58 17798916 17798934 TTTCTCTAGGGCTTGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 1 2 2 81 3L 17847363 17847451 AATACGCAATTGGCTCTGC 59 17847300 17847318 AAACTGCTCATCGGATTGC 58 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 3 4 4 102 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667495 18667513 GATATGGAGTTCGCCTTCC 57 NA Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 1 2 2 80 3L 19290533 19290622 CCACCATGAATTTGATCACG 57 19290665 19290683 ACTAGCTCCTGATTGAGGG 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075005 1 1 12 95 3L 19298642 19298847 GTATTACTCGGGCTTACATGC 59 19298567 19298585 GTGAAATTCCGACGAACCA 58 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044 1 2 3 115 3L 19486221 19486612 CAATGAGGACACGCTTCTG 58 19486124 19486143 ACATCTCCAGATACGGTTCG 59 NA Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 3 1 1 76 3L 19530153 19530171 TAACTCAACATGCCGTCCT 59 19530273 19530291 GAAGGCATATCGAGGATGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 3 4 4 81 3L 19635043 19635061 GTTTGCAAACCTGCATCCA 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 1 2 2 80 3L 19650050 19650204 CTGGATCAGAATCTGTTCAATGG 59 19649992 19650010 CATGGATTCGTGCGATGTG 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 3 5 5 80 3L 19795361 19795442 GGCATGTATTTGTGGTACGAG 59 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0273280 2 1 2 84 3L 20347432 20347450 ATACCTTCTGCGTGGATCC 59 20347492 20348415 CGTAGGTGTATCTTAAGTTTGTCTG 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 1 3 5 94 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505478 20505632 GATCACTGGTAGCTTTCCCT 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 1 3 3 80 3L 20989472 20989493 TTTCTAACATTCGAGGAAGAGG 58 20989354 20989431 GTCCATATGAGTGTCCCAG 57 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 1 5 5 110 3L 21192059 21192082 GATGGTAGACATATCTACAACCTG 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 3 2 3 80 3L 21565367 21565387 ATATGCTGCAACATGAGACTC 58 21565429 21565503 GTTGGAAGTCTCTGGTTGC 58 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 3 2 2 90 3L 21605208 21605226 ACCATAGCCGAAGTACAGC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 2 3 3 120 3L 21719351 21719369 AATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 3 2 2 113 3L 21959322 21959341 CAATTGTCCGCTTGGATGAG 59 21959413 21960243 CGTCGAAGAAGATGTTAGTTTCC 59 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078494 2 1 3 99 3L 22263003 22264017 CAGTATTCACATCTGAATCGCC 59 22264658 22264676 CGTCTAGGTCAACGTCCTC 59 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 3 1 1 70 3L 22279933 22279951 GCTCCTCAGGCATAATGAC 58 22279816 22279838 GGTCTACAAGATCTTCATTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 2 2 2 80 3L 23087936 23088015 GAGCTGATAGGCTTCAAACTG 59 23087876 23087896 GTTGACCAATACGAACTCGAG 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0078964 2 1 2 94 3R 23273 23465 ATCAGAATGGCTCCCTGAC 59 23523 23541 GACGTCGTTGTAGGAGTCC 59 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 3 3 3 147 3R 95683 95701 ACAGTAACGGCATGACTCC 59 95495 95573 CTAGCGTTCATAACCACTGC 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0300936 3 1 2 81 3R 134168 134352 AGTTGTGGTATTTGCTGTGC 59 134395 134414 TGGTCTGAGTAGGTTGAGGA 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 2 3 4 80 3R 162127 162205 CTGGCCCAGACTAGTATCC 58 162065 162087 CAGGTCAAGATATTGTAATCGGG 59 NA Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 2 2 2 106 3R 992798 992886 ACAATCGGAACACGATTGG 58 992956 992974 CAACTGCATAGAAGCTGCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078813 1 1 19 150 3R 1122346 1123042 CAATGGAGACATACTCGAGG 57 1122215 1122233 ATTGATCTTGAGGAAGCGC 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 2 4 19 134 3R 1129895 1138719 CAAGAACAGGTCACGTAGG 57 1125242 1125260 GAGTCCAAGTCGAATGGAG 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 1 4 4 133 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551 3 1 2 148 3R 3346299 3346903 AAGAAGATATGATGAAGACCGC 58 3346110 3346129 TTTGGGAATGAAAGGTGTGC 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 3 2 4 80 3R 3848353 3848373 GCAAGAAACTAATCATCGCAC 58 3847658 3848183 CTATTGGGTTGCAGATGCT 57 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 3 2 2 80 3R 5071306 5071385 AGTTCCAATATGGGCAGCA 59 5071244 5071265 AAACACCTTGACCACTATTTGC 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 2 2 2 76 3R 5121441 5121459 GTTAGTGAACTGTCGACCG 58 5121249 5121268 CAATACGTTTGTGTCTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 3 2 2 129 3R 5228663 5228682 CCTTAACATTCTCCAACGCA 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0082064 1 2 4 80 3R 5347456 5347537 TCGCAGACTCTTGACAAGG 59 5347581 5347599 CTCTAGCTTCTCGGCATCC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 1 7 8 88 3R 6417176 6419285 AGTCGACTCACTGATGGTG 59 6411626 6411647 AGAAGTTATCGCATAACTCGTG 58 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0302571 2 1 4 103 3R 6589661 6589842 CAAATGCATACAGGCCAGTC 59 6589907 6589926 ATCGATGGGCTAACCATCTG 59 NA Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 3 2 2 277 3R 6706821 6707298 GGAGCATGATACTTAAATGCCA 59 6706565 6706583 GATCTTTAGCACGTCCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 3 4 4 83 3R 7264083 7264160 CCAGAGTATCCTCAAGGAGG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100461 1 1 4 216 3R 7388966 7388984 CTACGTGTATCCGCATGAC 58 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 2 2 2 88 3R 7650662 7663896 TCATTTGAGGCTTCAACAACC 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 3 1 1 69 3R 8252635 8252654 TAAATGTGGACTTTACGGCT 57 8252789 8252810 GGAACATTTAGAGCAGAAAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 1 3 3 174 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 2 1 1 138 3R 8822323 8822341 TCGAGTACTACAGTGTGGA 57 8822500 8822518 AGGTCTGATGTAACTCGCT 58 NA DesignNoJunction Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 1 3 8 92 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 3 3 3 99 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142581 10142671 CAAGGGAACTCCTATTGTGC 58 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082988 3 1 3 122 3R 10568205 10568223 GAACTTTAGCTCGCTACCG 58 10568308 10613792 TCGAAGCCTTCATTCTTGTG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 88 3R 10634007 10634092 ACGTTAAGGTGTATCTACTGC 57 10633939 10633957 GTCGAAGATGGGATTCAGC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083106 3 1 2 178 3R 11231021 11231112 CATTTACGATCCTGGCTGC 59 11230861 11230882 CTCGATCGTAACTGGTAATCCA 59 NA Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 1 3 3 90 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616532 11616551 TGTAGCTTCTCACTGTTGCT 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0300195 2 1 2 80 3R 12202039 12202057 CGCAGTACTTCACGTACCA 59 12201785 12201996 TGGTGAGAATGATATGGCCA 58 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411 1 1 2 81 3R 13058999 13059021 CGATCTCTATCAGGAGTACAAGG 59 13058614 13058958 TGATGACAGCGTCACTCTG 59 NA Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 1 2 2 102 3R 13224493 13224749 GTGATGAAGGCATCAAGCG 59 13224409 13224431 CTGTACAGATAAAGTTCCGTGAG 59 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 1 2 4 149 3R 13308945 13309027 AAATGTGAATGAACCCGCA 58 13308814 13308833 TTATTCAGATCGATGCGTCC 58 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 3 5 5 114 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132725 14133184 GGATACAGGATGGGACTGG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 2 5 5 83 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396868 16396886 GTTGTCTATCTCCCGAGCC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 3 2 9 81 3R 16794198 16798904 GTCAACGAAAGGTTGATTTCG 58 16798945 16798965 TGACGAAGTACACAAAGAAGC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084077 3 1 22 81 3R 17177604 17200795 CACAGAGGCTCAAGGTACC 59 17177541 17177560 ATGTCTGTCGATTACCAGCT 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067 1 1 22 80 3R 17200833 17200851 CAGTCCCAGAACTACAGTG 57 17181269 17200791 TTCACCTAAATCTTGAGCCTC 57 NA Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0084169 3 1 2 103 3R 17801769 17821254 TGAAATATCCCTAGAACGCGT 59 17821316 17821337 GTTGCTCCTCGATATTCAAGTG 59 NA Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 1 2 2 113 3R 18189835 18189928 CTATCAGCTATCAGATTAAGAGCCT 59 18189999 18190017 CCACCATCAAATTGACGCC 59 NA Nonspecific Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515,FBtr0299516 2 2 2 80 3R 18239119 18239142 ATGATGATACTCACTACGATGGAG 59 18239175 18239261 CATTGTATCGATAGTTACGTCTTGG 59 NA Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112609 1 1 2 116 3R 18283187 18285569 GACATTCCCTCAATCGCAC 59 18285649 18285667 GTACTGAATGCCGAAGGTG 58 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0084260 3 1 3 142 3R 18340764 18340782 CGATAGTTGCATCACTCCG 58 18340887 18342354 GAAACAGACTCTTGAGGGTC 58 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 2 5 5 101 3R 19824626 19824644 ATAAGGAGCGTGATCTCGA 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084591 3 1 4 86 3R 19869976 19869994 ATGCAGACGCAATACATGC 59 19869857 19869927 TTGTATGCAAGGGACTCCTC 59 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622 3 1 3 80 3R 20209178 20209876 ATATTCCGACTGGATGAGCA 58 20209117 20209135 ATGGCTGTGCATGATTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 1 3 18 80 3R 20521838 20528850 CGATGACTTAGTACTCAATCGC 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100629 2 1 18 104 3R 20526444 20527823 GTTGTCAAATGAACACCATCCT 59 20528743 20528764 TCTCTGTCACGAGTGATATCAC 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 3 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089982 2 1 6 96 3R 21174049 21177846 GTGCTTAGAGTGCAATGACTC 59 21173973 21173991 CTCTGCTTGGAACTTGTCC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 3 4 7 93 3R 21575099 21580074 GTTTATAGAGGCCACTTGCTC 58 21575026 21575044 ACAATCGCTCTCCTGATCG 59 NA Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 2 2 2 80 3R 22301120 22301203 CCCAAGGATTAATGCTTCGAC 59 22301060 22301079 TCTTGTTCTCCAACTGACCC 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302096 2 1 10 110 3R 22402352 22404454 CTTATCAGTGAGGTTGTGCTG 59 22404526 22404544 GAATATGCCAGGCTCTCGA 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 2 2 10 81 3R 22423775 22423795 GAGACCCAGGATGATAAAGAG 57 22423836 22424309 GCTTCTCAGCATTAATCATGG 57 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 2 3 9 95 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 1 2 2 121 3R 22702878 22703271 CACTACAGAAACTTTGTCGTGG 59 22702778 22702796 TAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 1 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809929 22810007 TTAAAGATTTGGCTCTCGCTC 58 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 1 2 3 186 3R 22886860 22887128 CAATCCAACAAGGAGTGCC 59 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137,FBtr0085138 1 2 12 80 3R 22892379 22892397 ATCTTTGCAGAGGACGGAC 59 22892190 22892336 GGGAAGACAAAGGTATCCGA 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 2 5 5 80 3R 23392252 23392335 CCTTGGCAGTATCATCAACG 59 23392191 23392211 AGTGGCAATAGGACCTTAACC 59 NA Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 3 2 2 89 3R 23779656 23779732 TTATACCAGTACAAGAAGCACC 58 23779588 23779606 ATCATTCTTGGATTCCCGC 58 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 1 2 4 80 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350957 24350975 GTGTCGTAGTACCAGCTGG 59 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 3 2 3 114 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652795 24652813 GCTATCCTTGACGAAGCAC 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 1 7 13 119 3R 24726634 24726652 AAATACCGCTACAGGGACG 59 24726735 24745222 CTTTGCTGTCTTAGCCTGC 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 1 2 10 80 3R 24962359 24962377 TGCATTCCCGTAATGTTGC 59 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 2 4 5 86 3R 25297564 25298887 CTGCAGAACTTACGACCCT 59 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 3 2 2 93 3R 25570535 25570613 GGAAGAAGCTTGCTTAAGGTG 59 25570462 25570482 CGGAGTAGCTAAGATTCTGGT 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 3 2 3 171 3R 25574573 25574592 TGCTCGGTGTTATAACACTC 57 25574346 25574364 TGTTCTTCACCGACTTCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 3 1 1 71 3R 25631445 25631463 AAGAGGAGCTATCCGAGCT 59 25631333 25631351 CTTCTGTGCTTAGAGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085555,FBtr0300600 1 2 5 84 3R 25853224 25853242 AGTGGCGATAGTAATCCGA 58 25853290 25856495 TAGACAAGGCCTTTGATGC 57 NA InUTR Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 2 4 5 82 3R 25857056 25857153 GCCATCTACAGATTCTTGCG 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 1 2 13 81 3R 26421340 26421452 CCAAACGCAGATTAGGCAG 59 26421277 26421295 ATGACAATGTCCGAGGTGG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 2 3 6 80 3R 27554133 27554154 CCTCGAAACGATCAAAGAACTC 59 27554193 27558653 TAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 2 2 3 80 3R 27663680 27663703 TCATCTGTATCAATCAGTAGTGGG 59 27663741 27665612 AATTGATAGGGCTGTTGCAC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0112864 2 1 22 111 3R 27747384 27784764 GAGTTAAGGTAAGGATCGACG 58 27707532 27707550 TTGTTATTGTCGGAAGCGG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250 2 1 4 154 3R 5377302 5377321 TATCTGCTGGTGACGAAGTG 59 5375407 5375426 GGGAAACACTTGATGATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 1 2 2 90 4 279987 280082 GATGATCAGAATCCTCGCTC 58 280133 280153 GGTCTTCCATAGTAACGTTCC 58 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 2 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 2 2 6 98 4 350954 363555 AAACACAAGTAATAGGCGGC 59 350033 350051 GGAATGCGTTTACCACTCG 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 3 2 6 91 4 352622 363559 TTGCAAACACAATTGCGTG 58 352549 352569 CGTAAGCTATGTAAGCTGTGC 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089993 1 1 4 189 4 580915 581005 TCTCAGGATCAAGGTTCCTC 58 581350 581368 GACTTCGTCTACCATCAGC 57 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 3 2 4 108 4 585199 585218 ATCTCAAATCGCTTTACCGG 58 585286 586054 CGGTAAATCTCCTTTAAACCCT 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 1 4 4 80 4 714052 714072 ATACCAACGATGAGGAGTACG 59 713455 714012 CATGAGGTTGAATTTCCTCGG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 3 6 6 101 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974432 974452 ACTGAAGTAGGAGTAAATGCC 57 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 3 2 2 87 4 984849 984867 TCTTCCCACCAGATAGTGG 58 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 2 4 4 104 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449555 3449573 CTTGATACTGATCTCCCGC 57 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 2 2 3 80 X 31080 31099 CCATATTACGCACCATTTCG 57 31142 32454 CCGAAACTAAGTTCTTGCG 57 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 1 2 4 61 X 227605 227625 GATCAGGAAGCTATCCATCAC 58 211928 211946 ATCACCATGTCGCTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273443 1 1 4 115 X 312536 322080 CATTGTACATGTGGCAAGTC 57 211892 211911 TTTAGTACAGTGATTGGCGA 57 NA InUTR Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 3 4 4 113 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522615 522633 ATCCTTGGACACCTTCAGC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070126 3 1 8 86 X 550512 551140 ATCATCGTAAGGAAAGCCCA 59 551189 551207 TTGGCGATCTGGATATCCG 59 NA InUTR Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 2 5 6 87 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640607 640627 TCAGTATGTGATAGCTGACCG 59 NA Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 2 1 1 217 X 1374104 1374122 ACTCCTCGACGATAACCTC 58 1375090 1375108 TTGAATGCCGTCATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 br FBgn0000210 FBtr0070266 3 1 9 88 X 1531147 1531165 CAATATCGATCCCTCAGCG 58 1531361 1537112 CACTTGTGATGGCTTGAGG 58 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362 3 1 2 86 X 1783449 1783468 ATCAGCAGATCATAGTGTGC 57 1783319 1783400 TGGTAAAGGTCTGCTTGTC 57 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 2 3 3 96 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800184 1800204 ACAGCAGATAAAGGTACTTGC 58 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 3 2 3 99 X 1924317 1924336 GTCCAAAGACAATCCTCTGG 58 1923949 1924258 GTTGATCAAATCATCTGGATCC 57 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 77 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378 3 1 3 99 X 1989339 1989357 ACTACATGGAGAATGGCGA 58 1989420 2002421 TGAAACCATCTTTCCGTGG 58 NA Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428 2 1 2 144 X 2054276 2054428 GACACGATCTGCGAAACTG 59 2054150 2054168 TGTAGGTAAGGTCGAAGCG 59 NA Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 1 2 2 80 X 2160701 2160867 CGCAGTACAAGCAAGAAGG 59 2160639 2160659 GTCTTGTCTCTGACTTTGACG 59 NA Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 1 2 2 91 X 2268795 2268813 TATCTACTCCACGTCGGAG 57 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463 3 1 3 167 X 2277625 2278280 CCATTTAAACTCAGTTCCCGT 58 2275927 2275946 TGCACTAACTCATTCAGTGG 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 2 4 8 80 X 2386427 2386445 AGTAATGATCGCAGACCGA 58 2384862 2386384 TCCAACGTCGTTATTCTCCT 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 1 12 12 80 X 3228355 3228597 GTCGCTTAAGTTCAAACGCA 59 3228639 3228658 TCGGAAATCTGATTTCCCGA 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301823 3 1 7 91 X 3593510 3593728 GCCGACAAAGTTTGTCTGG 59 3593780 3593801 CCTGCATCGAATAGAATTGTGG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 2 4 4 153 X 4598142 4598235 CAACAACTACGGAATGGGC 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 1 4 4 80 X 4619217 4620278 CGACAGTTTCGGTTACATCTC 59 4620320 4620338 TTGAGCGGATAGCGTATCG 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589 3 4 5 81 X 5123366 5123386 GGATCATTCCTGAATCTGACC 58 5123429 5127484 GATCCAGCAGCTGTTTGAG 58 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 1 4 6 123 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 2 2 2 138 X 6586547 6586565 GATCTATGGCGATGAGGGT 58 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 1 3 6 153 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 2 2 2 80 X 6868809 6868827 ACGTGTTCATCTGGTTCTG 57 6868669 6868766 TAAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 1 4 21 110 X 6981688 6986743 TTTAAGATGGCGAGTGGTG 57 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0300836 2 1 2 123 X 7609090 7609108 GGATAACGGAGAGTGAGGG 59 7608506 7608524 CTGTCCTTCATTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 1 3 3 80 X 7852240 7852318 GTACGCCAACTAGAGGAGG 59 7852178 7852200 GGCTAGAGTCTTGTACTTATCGA 59 NA Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 1 2 2 104 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997746 7997831 GAATCCTGCTTGTAATCCGG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375 2 2 7 124 X 8117880 8117899 GTCCGTGAACCAAGATAACG 59 8118075 8121916 CATTCCCATTGAGCTGTGG 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 2 2 6 81 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442549 8445793 GGTAAATTGTCCTGTATCGCC 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 3 4 6 82 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442550 8444127 CTTCATTCATGCCTGTATCGC 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302663 3 3 6 93 X 8918737 8918755 TGGATACCCTAGACTCCGG 59 8918809 8919208 CGCTCTTGACTTTCCAAATAGG 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 3 4 6 117 X 9005030 9005126 CGAGCATGGATTTAATCCAGC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 2 3 3 106 X 9048444 9048462 ATTTCAAGACCGATCTGCG 58 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 1 2 3 169 X 10986856 10986874 CCATTTCCACCTGAGACAG 57 10987124 10987142 GCGAAAGGTGTATTCTCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 1 7 15 107 X 11275918 11275936 TTGGATGACTCGAAGAGCA 58 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 2 7 15 108 X 11275917 11275936 ATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0073488 3 2 15 81 X 11277075 11277093 ATAATGTGAGTGCCCAAGC 58 11277137 11281815 ATGCGCTGATTCAAGATCTC 58 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073567 3 1 2 81 X 11763305 11763323 TGAAGCCCATACGAAAGGA 58 11763368 11763528 AAGTGGAACTTCACCCTGG 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 3 4 4 98 X 11910744 11910819 GTTAATCCCAACACTGGCA 58 11910880 11910899 GTACAGGATGTCCAAGTTGG 58 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299532 1 1 2 80 X 12425101 12425119 TATTCCGGTCTGGAATGGT 58 12423641 12425057 ATCACAGATGGCAATCTCG 57 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 1 2 6 89 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534863 12542578 GCCGTTGATCTGATCTGAG 58 NA Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 1 2 2 218 X 12661317 12661335 ATCGTGTCGTTCAACTCGA 59 12663853 12663961 GATGTTGAACATGCCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 1 2 2 80 X 12837476 12837560 TATTTCTGGTCTATCGAAGGGTG 59 12837600 12837618 TTCAACTCCTGGATGGCTC 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 3 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 1 3 10 80 X 13489081 13489099 TCCAAGTATGAGCGACGTG 59 13488924 13489040 ATAGACCGTATTATAGCCACCC 59 NA Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073944 2 1 2 107 X 14485108 14485360 TAACAGAGGACATAATGTGCCA 59 14485022 14485040 CCTGATGAGTCGGTCTCTG 59 NA Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943 3 1 2 177 X 14485111 14496503 ACGCCAATGGACATAATGTG 59 14484953 14484971 CTCTCGAGGTGAACAACGT 59 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 2 3 3 125 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281649 16281728 GATGCCTTGGTGTAGAAGC 58 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121,FBtr0111023 3 2 4 80 X 16380928 16383030 GAACTACACAGATCACAAGGAC 58 16380869 16380889 ATGAAGCTGTGCATAAAGTCG 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0074357,FBtr0301354,FBtr0301353 1 3 4 93 X 16654995 16655013 TGTCAGGCTGGATTCAGTG 59 16652610 16654370 AGTAGGTTTGTCCTTGCCA 58 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 2 3 3 60 X 17031947 17032021 AAACTGTGCCCAATCTTCG 58 17031905 17031923 AGAGACTATTGCTGGCCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 baz FBgn0000163 FBtr0111000 1 1 2 90 X 17086988 17087008 GAACGACATCTTCAACCATCG 59 17087060 17087355 ATCGCCTCCACTAATCTGG 59 NA Drosophila melanogaster 61 CG10597 FBgn0030832 FBtr0074398 2 1 2 98 X 17125090 17125246 CGAAGCAAATTGATGCATCAC 59 17125012 17125035 CCTCGATTTCTTACCTTCATTCTG 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 3 2 6 175 X 17156845 17156863 AGTATGATGAATCTGGGCG 57 17157001 17163972 GTATTGGCGCAAATATCCAC 57 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 2 2 6 175 X 17156846 17156864 GTATGATGAATCTGGGCGG 58 17157003 17163973 CGTATTGGCGCAAATATCC 57 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 2 4 4 294 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198373 17198391 AGCCATTTGAAGTGCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0074491 1 1 3 95 X 17461877 17461895 TTCTCCTCCTGCATGAAGC 59 17461725 17461821 CATAGGCACATTAGGTATGGGT 59 NA Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 3 2 2 83 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492356 17492376 AGTTCTGTATTGTCATCGCCT 59 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 1 2 6 80 X 17784698 17790570 TTCACCCAGGCATATAGCA 58 17790614 17790632 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 2 2 6 68 X 17785912 17785930 AATACGATAGCATCGGGCT 58 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 1 2 6 80 X 17785900 17785922 CAAGTCGAGATCAATACGATAGC 59 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 3 3 3 81 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027153 18027172 CGTACGTGTACATGAGAGTC 58 NA Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 3 2 2 81 X 18055280 18055301 AAGTTGAAACAGGATACCATCG 58 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598 3 1 3 85 X 18460581 18460599 CCCAGTACGCTTATCAGTG 57 18460645 18460737 AGTCATCATATTAAGGCTACCG 57 NA Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074732 3 1 2 74 X 19492110 19492200 ACGGGAGTATTACGATACGT 58 19492234 19492482 CCTTTGGCATAAACATTCTGGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 2 1 1 80 X 19600118 19600137 CATACCCAGAAACGATCCTC 57 19600242 19600260 TATTCGGCATGGTCAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074811,FBtr0074810 3 2 2 150 X 19637535 19637553 ATAACGTAACGTAGCCGCA 59 19636865 19636883 GATCCCGCTGATAGTAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0300210 3 1 2 82 X 20338727 20338746 CAGTTTACTGGGACTCAGCA 59 20338791 20339585 GTCTGGAGGGAACTCTACG 58 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569 1 3 5 80 X 20663560 20663640 ACATACAAGAGACATTCCCGA 59 20663500 20663518 ATAAACGCATCGACCACTG 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 2 2 9 97 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499694 21499713 ATAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 1 2 5 147 X 21886355 21887250 TGGGCAATAAATATGTCGAGC 58 21887359 21887377 ATCAGGGTGTCTCTGATGG 58 NA Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0302542 3 1 3 106 XHet 64293 66135 AGGACATCGATGAGTTCCT 57 64205 64226 CAAATTCGTAGCTCATACTCGT 58 NA InUTR Drosophila melanogaster 61 tRNA:K2:42Ad FBgn0011890 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-11 FBgn0046832 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 2 4 4 89 XHet 12050 12365 GGATGATAACGATAATCGGAGAC 58 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-1135c FBgn0083010 FBtr0113573 3 1 1 86 X 17040353 17040377 GCATAACTCTTAATGGACTCATAGG 59 17040291 17040309 TTAAGTTCCAGGAGAGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1232 FBgn0082997 FBtr0113561 1 1 1 66 X 6637821 6637839 TGCGCGAACATTGTTTCTC 59 6637773 6637794 GTGCATTTCATTGAGTTACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR32785 FBgn0052785 FBtr0070603 1 1 1 60 X 3713733 3713754 GTTCCATGGTGTAATGGTTAGC 59 3713774 3713793 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 stg1 FBgn0064123 FBtr0091649 2 1 1 60 X 20977747 20979133 GCAATACCCTATACGGTCAC 58 20979155 20979174 CTAGAAATACACCAGCAGCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 2 2 2 81 X 20932575 20946400 AATCGAAGCGGTCTACCTG 59 20946445 20946463 CTTCATGCAGTTGAGCACC 59 NA Drosophila melanogaster 61 CG1695 FBgn0031116 FBtr0077308 3 1 1 113 X 20312304 20312433 CATCATGCCAGATTTGGCC 59 20312507 20312528 AAGTAAACGAGTCGATAGAGCT 59 NA Drosophila melanogaster 61 Obp19c FBgn0031111 FBtr0077326 2 1 1 82 X 20289403 20289487 GATCAAGTTGATGGACGCC 59 20289339 20289357 TCTTGTTGTCCTGGGTCAC 59 NA Nonspecific Drosophila melanogaster 61 CG1504 FBgn0031100 FBtr0077338 2 1 1 60 X 20181815 20181833 AAGATCGACTCGATCGAGG 58 20181773 20181792 ATTTCAGGTGCTTTATGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sdic1 FBgn0067861 FBtr0089604 1 1 1 288 X 20068893 20068978 TCTGGTCGCTAAAGGACAC 59 20068623 20068641 TAGATCTCGTCACCCTGGT 59 NA DesignRelaxed Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 3 2 2 170 X 20067043 20067413 ATGGAATACAAACCCGTGC 58 20066891 20066909 GTAAACCGCCTTGATCGTC 59 NA InUTR Drosophila melanogaster 61 CG17003 FBgn0031082 FBtr0070035 2 1 1 60 X 19895255 19895273 AACGATGCAAATTCCGGAC 59 19895213 19895232 AGATCGATGTACCTACCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074811,FBtr0074810 1 2 2 80 X 19637732 19638306 GTAACAACAAAGGCGAATCC 57 19637671 19637689 TTTAGTGGCGATTTGTGCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14215 FBgn0031052 FBtr0074746 2 1 1 80 X 19548335 19548490 GCCACATTCTCTAAGATTGCC 59 19548532 19548550 GTCGTTAAGCAAAGCTCCG 59 NA Drosophila melanogaster 61 CG14212 FBgn0031045 FBtr0074742 1 1 1 88 X 19520379 19520397 TAGTTGCAACGATCTGTGC 58 19520449 19520467 TCATCTTACCGTGCAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733,FBtr0074734 3 2 2 82 X 19504642 19504732 GACCAGAAGCTATTGGTGC 58 19504777 19504796 AGGAACTCCCGATTGTACTC 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074714 2 1 8 86 X 19390806 19400519 CTCGATTCGTAAACGCAGC 59 19400566 19400587 CTTCTGATGATGCTCCTTTCAC 59 NA InUTR Drosophila melanogaster 61 Nat1 FBgn0031020 FBtr0074711 2 1 1 96 X 19376333 19376351 AAGGGTCGCATCTTTAAGC 58 19376410 19376495 AATTGATGTAGCGATCTGCC 58 NA Drosophila melanogaster 61 CG8051 FBgn0031012 FBtr0074683 3 1 1 81 X 19197559 19197677 TTAACATTCTAGTGACGTTCGC 59 19197499 19197518 CTGGAGATTCCTAGACCAGC 59 NA Drosophila melanogaster 61 CG32536 FBgn0052536 FBtr0074686 3 1 1 216 X 19169553 19170519 CTTCTTCAGTGAGCTGACG 58 19169295 19169313 CAGAATGTGCTTGGTCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15882 FBgn0030983 FBtr0074703 1 1 1 60 X 19018199 19018217 GAATGATGTCGACATTGCC 57 19018157 19018177 TTCCTTCGAAACAGATTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 1 2 2 84 X 18374510 18374585 GAATGTGACCAATCGTGCC 59 18374444 18374462 AAAGGATGCATTGCACTCG 59 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 1 3 3 89 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 Her FBgn0030899 FBtr0074590 3 1 1 86 X 18099004 18099023 TTAAGGACCTGCTTCAGGAG 59 18098809 18098827 GAACTGCCAATTCCAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 2 1 7 159 X 18007407 18007490 AGAAACTCAGGTTGCTGCT 59 18006671 18006692 TGCTTGATCAGAGATTTGAGTG 58 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508,FBtr0112999 1 2 2 80 X 17939324 17939347 GGTTGAACTACGATCACTTTAGTG 59 17939385 17939651 GCAGGATATTGGCATTTGCT 59 NA Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074293 2 1 2 133 X 16480553 16480571 AAGCGCAATGTCAATGTCC 59 16462286 16462304 TCACTGCTTGCTATTCCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gpi1 FBgn0086448 FBtr0074231 3 1 1 80 X 16254530 16254553 GCCTTACTAGTGGACTTAATATCC 58 16254590 16254665 CACATTGTAGAGGACTTTGGT 58 NA Drosophila melanogaster 61 CG9915 FBgn0030738 FBtr0112992 3 1 1 281 X 16205455 16205529 AATCTGATGACGACGGACC 59 16205133 16205154 GATCGATCAGATCATCGTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9914 FBgn0030737 FBtr0074240 1 1 1 169 X 16201881 16201899 CCAACACCATCCTCTCCAG 59 16201488 16201506 CTTCTTCACCCATTCCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 1 2 2 80 X 15810713 15810826 GTGATTCTAAATGGACTTGGC 57 15810867 15810886 CTTGGTATCCCAATCTGTCC 57 NA Drosophila melanogaster 61 Aats-arg FBgn0027093 FBtr0074178 3 1 1 80 X 15737020 15737102 GGAATCCAAGAAGCGATTCG 59 15736959 15736979 ACACCTTTCTGCAATGAAACC 59 NA Drosophila melanogaster 61 CG8105 FBgn0030661 FBtr0074048 2 1 1 128 X 15483059 15483141 TGAGTCCCACATCCTACAC 58 15483233 15483251 GCAGATTCTGCTCCATGAC 58 NA Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074079 2 1 2 111 X 15341857 15341939 CTATGTCTGCTGGTTCCGA 59 15341764 15341782 CTGCACAATCGAGTACAGC 59 NA Drosophila melanogaster 61 PPYR1 FBgn0030623 FBtr0074023 1 1 1 60 X 15138712 15138733 CAAGATTACTTTGACCACTCCA 58 15138673 15138691 CTTGATGTCCTTCACCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18157 FBgn0030563 FBtr0073919 2 1 1 60 X 14209338 14209356 CTTGAATGCGGACGATGAG 59 14209296 14209316 ATTCTTCAACGGTAACATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fbxl4 FBgn0030555 FBtr0073923 1 1 1 80 X 14129743 14129762 TGAACTCCTGCAAGTTTCTC 58 14129630 14129700 GCAGGCTCAACTCTATCAG 57 NA Drosophila melanogaster 61 Ste:CG33242 FBgn0053242 FBtr0300091 1 1 1 110 X 13947324 13947342 TCTGATACACAGCTGGACG 59 13947172 13947250 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 mus101 FBgn0002878 FBtr0073817 3 1 1 60 X 13618371 13618390 TCGATGTGAAGCAATTACCC 58 13618413 13618431 CTTTCCAGGAACAGTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11816 FBgn0030495 FBtr0073785 2 1 1 99 X 13447285 13447452 GGAGTACAAATTGGTGATGAGC 59 13447207 13447225 ATTGTAGCCCTCCTGAACG 59 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 3 3 3 85 X 13221559 13221577 TTCTCATGCACGATCTGCT 59 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 Mur11Da FBgn0052644 FBtr0300212 2 1 1 99 X 12862153 12862270 TCAGTGGACAAGAGTTATTCG 57 12862329 12862349 CGGTGATTGAAATAGTAGCCA 58 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073455 2 1 2 298 X 11250239 11250257 TTTCCCTGGCTTAATCCCG 59 11250585 11250603 AGTCGTCGGCTATTTCCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15200 FBgn0030278 FBtr0073445 2 1 1 60 X 11077103 11077121 TTCCTTCTGGAACGGACAG 59 11077145 11077163 TATGGCATCACCCATTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2202 FBgn0030240 FBtr0073380 2 1 1 89 X 10745596 10745615 GATGGAGCCAACTTTACACC 59 10745667 10745748 CATGAGATGCGCCATAACG 59 NA Drosophila melanogaster 61 CG2111 FBgn0030223 FBtr0071492 1 1 1 81 X 10554370 10554446 GCAGAACATACGCAATTATTGC 59 10554485 10554506 AGTGGACAGACATTCAATTAGC 58 NA Drosophila melanogaster 61 CG2898 FBgn0030195 FBtr0071445 2 1 1 60 X 10269618 10269636 CATCCGTCAACAGTCTACC 57 10269660 10269678 CGTTATTACAGCACAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15314 FBgn0030172 FBtr0071417 1 1 1 79 X 9942098 9942116 ATTATCAACTCGCCGACGT 59 9942159 9942177 TATTTGGAGGTCGTCGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0071415 1 1 2 142 X 9905016 9905034 ATAAGGAGCAGGGCTACTG 58 9905137 9905215 AATGACCATAACAGAGTTTCCC 58 NA Drosophila melanogaster 61 CG1468 FBgn0030157 FBtr0071388 2 1 1 113 X 9772628 9772646 ACGTCTACTACCGAAAGCG 59 9772723 9772864 CTACATCTCCACACTCCGG 59 NA Drosophila melanogaster 61 CG3004 FBgn0030142 FBtr0071368 3 1 1 81 X 9499847 9499866 GACCACACCATTAAGGTGTG 58 9499729 9499803 CATTCACTTGCGAGGTCTC 58 NA Drosophila melanogaster 61 CG34026 FBgn0054026 FBtr0100081 3 1 1 101 X 9427966 9427986 TGCAGATGATTACCAATTGGC 59 9428049 9428128 TTTAGGTTGTCCGACTGCT 59 NA Drosophila melanogaster 61 CG12121 FBgn0030109 FBtr0071334 1 1 1 80 X 9125701 9125721 GAGGAATCACCTAAATCCCAG 57 9125579 9125662 CTTAACACGAACTTTAAGCTCC 57 NA Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071340 1 1 2 146 X 9090344 9090365 CGTCTCTACTTTCAAATAGGCA 58 9090143 9090238 TCATATGCTTCTTGGATGGC 58 NA InUTR Drosophila melanogaster 61 CG15365 FBgn0030077 FBtr0071357 2 1 1 92 X 8950363 8950489 CAATGAGAAAGACAAGGAGGTG 59 8950292 8950310 AGCTTCAGTTGACACTCCC 59 NA Drosophila melanogaster 61 CG42593 FBgn0260970 FBtr0301748 3 1 1 80 X 7834444 7834535 ATCAGGATTACAAGGAACACCT 59 7834576 7834594 CACGGGACATTTCCAACAC 59 NA Drosophila melanogaster 61 hdm FBgn0029977 FBtr0071133 1 1 1 81 X 7813088 7813106 AGTGCTGTATGGGATGGTC 59 7812922 7813043 TTGTTGACAGGCAATGCAC 59 NA Drosophila melanogaster 61 CG4615 FBgn0029935 FBtr0071020 2 1 1 116 X 6993680 6993769 CTACCAGCAGGTCTTCCAC 59 6993582 6993601 ATCATACCGTGGAAGTGGTG 59 NA Drosophila melanogaster 61 CG4557 FBgn0029912 FBtr0070994 3 1 1 120 X 6739097 6739115 GCATTGTGATAATCGCCAG 57 6739198 6739285 TTGGTGGAGTCATTCAAGTG 58 NA Drosophila melanogaster 61 mab-21 FBgn0029003 FBtr0070890 3 1 1 136 X 5906189 5906207 CTATCCAAGGAGTGCATCG 57 5903154 5903172 GTCTTCAGAATGCTCAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32756 FBgn0052756 FBtr0070860 2 1 1 60 X 5840154 5840172 TTTCCTCAAGTGGGAATGG 57 5840194 5840280 CATTTGGCTATACAACTGTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 XRCC1 FBgn0026751 FBtr0070763 3 1 1 80 X 5225434 5225452 CACAGCGATTCAATACCGT 58 5225496 5225574 CGATCGGGATTCTGTATGC 58 NA Drosophila melanogaster 61 CG15472 FBgn0029724 FBtr0070736 3 1 1 60 X 4663815 4663835 TCTGGGAGTTCTTCTTTACGG 59 4663775 4663793 TCGTTCTCCGGGTAATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 1 2 2 101 X 4570357 4570375 AAGCACTACAGTCCTGTGG 59 4568640 4570292 GTTGTTGTACGCTCTGCAG 59 NA Drosophila melanogaster 61 CG3568 FBgn0029710 FBtr0070676 2 1 1 110 X 4438202 4438280 TTTGGGCGAATATGCTAATCAG 59 4438348 4438369 GATTGGCTCCGTTCATATAGTG 59 NA Drosophila melanogaster 61 CG15572 FBgn0029702 FBtr0070647 2 1 1 60 X 4163772 4163793 GAGGATAAGAAGGATAACGAGG 57 4163814 4163832 TCAACATGGAAGAAGACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 1 1 1 76 X 3982322 3982342 ATGATGCGACTTAAGTCAGAC 58 3982380 3983879 CTCAATGGAGAAGCCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32786 FBgn0052786 FBtr0070614 2 1 1 61 X 3835160 3835178 ATGACAACAACGAACAGGC 59 3835203 3835274 CTCATCGTTTCCACTCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32789 FBgn0260484 FBtr0070600 2 1 1 191 X 3693391 3693409 TTCGTGGAGAAGTTTGGTG 58 3693644 3693879 GATCACACCCTCCATGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33221 FBgn0053221 FBtr0070636 1 1 1 60 X 3691759 3691779 GTATTTAGCAGACACAACGGG 59 3691719 3691737 AAACTGAGCAACGTCTGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571,FBtr0070572 3 3 3 60 X 3409295 3409316 GTCGGACTACTCAAAGTTTCTG 59 3409337 3409355 AACTTTAGGCAGAAGTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10801 FBgn0029660 FBtr0070526 2 1 1 82 X 3355971 3356090 ATTACCGGAGATTTGCTCCT 58 3356135 3356153 TTCGATATTCCGGCTGTCC 59 NA Drosophila melanogaster 61 CG14422 FBgn0029645 FBtr0070555 3 1 1 162 X 2837515 2837533 ATCTTCTACGGAGCTCTGC 59 2837794 2837813 ACATAAGCTGCTGTAAGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 2 3 3 88 X 2679094 2679112 ACAAGATGACCTTGAAGCG 58 2678712 2679044 CAGGATTATCTGCAAATAGCG 57 NA Drosophila melanogaster 61 CG2662 FBgn0024993 FBtr0070478 2 1 1 80 X 2592945 2592963 TTGTTCCGTATCGGTTTCG 58 2593006 2593090 ACCTGTTTGGGTTTCTTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 2 2 2 66 X 1795034 1795103 TAGAAGGCACACTCCTGAC 58 1794986 1795006 ATTATGACTAGTCCTCCCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14818 FBgn0026088 FBtr0070364 2 1 1 87 X 1773374 1773453 ACCTCCAAGAGATGGAGGA 59 1773305 1773323 ATAATGTCGTCTGTGCGCT 59 NA Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 2 1 1 271 X 1374000 1374018 CTCCAACGATGAGGACTCC 59 1374253 1375058 CTTCCGTTGTTCGTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14778 FBgn0029580 FBtr0070254 1 1 1 85 X 1364120 1364198 GATGGGTCAAGATTTCCAGC 59 1364246 1364264 GTACGAGATCGTCTCCACC 59 NA Drosophila melanogaster 61 CG11384 FBgn0040363 FBtr0070251 2 1 1 60 X 1069157 1069177 CTTATCGAGTGGTTTGAGCTG 59 1069117 1069136 ACATATAGGCGTAGATCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070168,FBtr0070167 3 2 3 145 X 829695 829713 AAATCACGCTGCAAGTCAC 59 830442 830460 TCTGGATCACAAACTCGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 3 2 2 81 X 818648 818788 CGGACAACACAGTCAATATCC 59 818587 818606 TAGTAGATGTAGCGCAGCAG 59 NA Drosophila melanogaster 61 ase FBgn0000137 FBtr0070075 1 1 1 60 X 355900 355921 GCAATACATCAGAATACCAGGA 58 355942 355960 GCCCAATAAGTCAGTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40947 FBgn0085540 FBtr0302352 1 1 1 60 U 8131588 8131607 TCCTGAATCTGGTGTTCGAC 59 8131547 8131565 ATGCCGTACTCCTCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41562 FBgn0085693 FBtr0114142 3 1 1 91 U 5467329 5467347 CAAGCACATGACCTTGACC 59 5467401 5467493 GATGCTTACTTGACTGCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 1 2 2 80 4 984839 984860 ACCAGATAGTGGGTCATAAGAC 59 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972,FBtr0089971 3 2 2 85 4 653265 653284 GAATTACATTACCTGGCGCT 58 653329 653963 GATCCACACCTCAGAATTAGTC 58 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 3 3 3 111 4 231099 231188 TCTGATAGGAACAGCTGGT 57 231260 231281 CTATCGAGTTACTATCACGGAC 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305a FBgn0082976 FBtr0113588 3 1 1 60 3R 24427491 24427509 ATTAAAGCGTCGGCTAAGC 58 24427533 24427551 TGTTACACTGAATAGGCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 3 3 3 84 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043629 27043648 CTCAATGGTCGCAAGTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15546 FBgn0039807 FBtr0085718 3 1 1 60 3R 26701180 26701200 AAGGATACTGAAGCAAACGTC 58 26701140 26701159 GACTCGACTTTCCAGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dj-1beta FBgn0039802 FBtr0085703 2 1 1 136 3R 26633376 26633466 GTGAATAACTATAGCTATGTGGACG 59 26633560 26633578 TCCTGGACTTTCTCCTTGC 59 NA Drosophila melanogaster 61 CG2267 FBgn0039792 FBtr0085672 2 1 1 81 3R 26454491 26454509 CAATATTGGAGGTGGCGAG 58 26454374 26454447 CTTCCAGTCAGTCATCACTG 58 NA Drosophila melanogaster 61 CG34041 FBgn0054041 FBtr0302521 1 1 1 80 3R 26334888 26334953 AATTGACGAAGCCCTTATCG 58 26334995 26335014 ACTGGACTAGATGCTATGGC 59 NA Drosophila melanogaster 61 Anp FBgn0000094 FBtr0085611 1 1 1 110 3R 26035715 26035733 CTTTGTGGTCCTTGTCGTC 58 26035869 26035887 GCAGCATTGTGTATTGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746 2 1 2 189 3R 25999044 25999125 CTCATGGATATCGCCAACG 58 25998873 25998891 ATTTGTCACCGTCGATGAG 58 NA Drosophila melanogaster 61 Cog7 FBgn0051040 FBtr0085509 1 1 1 108 3R 25758179 25758258 CAATGATCTAAAGGGAGTCTGTG 59 25758093 25758111 GAAGTCCTCCACTTGGGTC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 1 4 6 80 3R 25723356 25727912 CGGAAGGAAATGAACGGAC 58 25727953 25727974 CTCTTGGATCGATTCGTTAAGC 59 NA Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085468 1 1 2 97 3R 25464820 25465961 CCAAATCGCAGAGATTCGC 59 25464741 25464759 TATGTAGGTCTGCTCGCAG 59 NA Drosophila melanogaster 61 CG2321 FBgn0039663 FBtr0085436 3 1 1 124 3R 25313966 25314037 CAACTAGATCTTTCTCTGCCG 58 25313862 25313880 GAGTCGTTGGCATAGTGGA 59 NA Drosophila melanogaster 61 CG14507 FBgn0039655 FBtr0113305 3 1 1 113 3R 25053034 25053052 GACCAGTCTCATGGTATCG 57 25052650 25052957 CGAGTGTCCCTATGATCCT 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299747,FBtr0299753,FBtr0299742,FBtr0301396,FBtr0299749,FBtr0299743,FBtr0299746,FBtr0299751,FBtr0299744 2 13 13 80 3R 24745227 24745248 TCATTCAAGATGATGCTGATGG 59 24745285 24745964 GTGTGGCCATGATCTTATATCTG 59 NA Drosophila melanogaster 61 Gr98b FBgn0046887 FBtr0085186 3 1 1 81 3R 23369024 23369042 TGACCATCCTTCACATGGT 58 23369084 23369171 ACTAAGAACCGTTCATACTGAC 58 NA Drosophila melanogaster 61 CG14260 FBgn0039504 FBtr0085157 3 1 1 154 3R 23091557 23091575 GACTGCTACATCGACAAGC 58 23091741 23091759 GAGTTGTCCATGAGCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085084,FBtr0085085 2 2 2 98 3R 22777568 22777586 AACATTGAGCTCATGGACC 57 22777133 22777506 GCAAACGAACTTAACGTCG 58 NA Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095 2 1 2 95 3R 22692369 22692509 GAGCTGTCTATCCTGTCACTC 59 22692294 22692312 AAATTCCGCTCGAAATGCC 59 NA InUTR Drosophila melanogaster 61 CG34291 FBgn0085320 FBtr0112487 1 1 1 82 3R 22251127 22251145 AGGAGGGTAACAAGTGCAC 59 22251063 22251081 CAGATTGACGCTTGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084994 2 1 6 102 3R 22087130 22087148 GTTAACCGCTCTCCTCCAG 59 22083752 22087065 TCGAGTGTAGTTCGAACTGG 59 NA InUTR Drosophila melanogaster 61 CG14551 FBgn0039408 FBtr0084971 2 1 1 130 3R 21887695 21887713 TCAACAATCTCTGGCTGGA 58 21887271 21887289 ATAGATAAGTGGTCCCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Dak1 FBgn0028833 FBtr0084976,FBtr0299798 1 2 2 60 3R 21880923 21880942 CAGCAATAGGTTCATCACCA 58 21880882 21880902 GCTCATGATTCCGATATTGTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31104 FBgn0051104 FBtr0084825 2 1 1 84 3R 21111738 21111758 GATTTGAAATTGGCCTTCGAC 58 21111801 21111877 CCTTTAGGAAGTATGGTTGCTC 58 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 3 2 2 81 3R 20707547 20707638 GAAATAAGCAGGTGCAGCA 58 20707484 20707502 AAGTCGACTAGCACTTGGG 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 2 3 3 80 3R 20677648 20677719 CTGTTCCTCAACCTACTCCG 59 20677758 20677780 CTGCTAAGAAGAAATTCCAGGTC 59 NA Drosophila melanogaster 61 Dms FBgn0011581 FBtr0084607 1 1 1 115 3R 20167395 20168560 CTCATCAGCATGTCCTTCG 58 20168639 20168657 ATGCCAGACTGGCATAGAG 59 NA InUTR Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0300475 3 1 2 135 3R 19932655 19932673 GTGGTTGATACGACTACGC 58 19927760 19932558 GCTTGGATTCGGATATTTCGT 58 NA Drosophila melanogaster 61 CG31142 FBgn0047114 FBtr0084492 2 1 1 138 3R 19755127 19755248 TGGCAAAGATAAGCTATGCA 57 19755346 19755367 CTTATGGTTTCATAGAAGGCAC 57 NA Drosophila melanogaster 61 CG10251 FBgn0043005 FBtr0113347 2 1 1 85 3R 19524337 19524418 TGCTAACCGTAATTGTGCC 58 19524270 19524288 CTCCAGACTCAGCACTACC 59 NA Drosophila melanogaster 61 beat-IV FBgn0039089 FBtr0084433 2 1 1 81 3R 19399758 19399776 GTTCTACCGATACGTGCCA 59 19399820 19400036 CGAAAGCTCCTCAATGACTC 58 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485,FBtr0084256 1 2 2 119 3R 18304659 18304677 AAGTGTAGCCAGAATGCGT 59 18304758 18304835 GGCAATCGATTCATCATAGCA 59 NA Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 2 2 2 175 3R 18205912 18205987 CGATTCTGAATGGAAGACAGAC 59 18206122 18206141 ATGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 CG15498 FBgn0038892 FBtr0084122 3 1 1 111 3R 17393986 17394063 GTCCCATAAGAATTGTGGCC 59 17393894 17393912 TGGTATGGTCTTGCCTTCG 59 NA Drosophila melanogaster 61 lbl FBgn0008651 FBtr0084092 3 1 2 211 3R 17258987 17259005 AACTTTGACGAAGAGCAGG 58 17236494 17236800 AACCAAGTGATGACCTGTG 57 NA DesignRelaxed Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 82 3R 17202595 17202614 ATTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258,FBtr0084014 1 2 3 80 3R 16956053 16956073 ACCAAACATTATGCACTGCAG 59 16956115 16956212 TACAACTTCGCATCGGGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 1 2 2 80 3R 16727881 16727899 TTGGCTTCATCCTAACGAG 57 16727943 16728161 TCTCATAGACGAGACCCAC 57 NA Drosophila melanogaster 61 CG10830 FBgn0038839 FBtr0083986 3 1 1 69 3R 16722517 16722535 CATCACCATCGGTTACCGT 59 16722466 16722484 CTTCCGGAACTTAACGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotA FBgn0028396 FBtr0083971 2 1 1 82 3R 16696814 16696918 GCTCTTATGTGCTTTGCAC 57 16696964 16696982 CTAAGGTTGTCAGCCTCAC 57 NA Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0083993,FBtr0110823 2 2 2 64 3R 16647076 16647158 CAGCAATACCAATACGAACAGG 59 16647033 16647051 TGCTGATATTGGACCGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123,FBtr0083795 3 2 2 159 3R 15626212 15653384 GTGAATTCACAATTCTCCAGC 57 15623208 15623226 TGAAGACCCATGTTCTCGT 58 NA Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083728 2 1 2 120 3R 14920795 14921136 AATATCTGTGCAGAATGGCC 58 14921219 14921237 TCCGACTTGGTCTTGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34284 FBgn0085313 FBtr0112480 1 1 1 82 3R 14728601 14728620 GCAGTGCTGATAGCTTTCTG 59 14728462 14728480 TCAATTGACTGTTGCACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rh2 FBgn0003248 FBtr0083697 1 1 1 126 3R 14726197 14726216 TCATTTGCTACTTCGGACTC 57 14726305 14726405 TACTTGGGATGGCTAATGC 57 NA Drosophila melanogaster 61 Cpsf73 FBgn0261065 FBtr0083690 3 1 1 88 3R 14487595 14487613 GTGGGAAGCAAACTCTCAG 58 14487464 14487544 ATATCCGTGTATTTGCCCAG 57 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 2 5 6 80 3R 14229547 14229625 GATGAGTTCCTCATTGCCG 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 1 4 7 112 3R 13997412 14001059 TCCGCTAAACGAGAAGACC 59 14001135 14001153 TGAACTTGAGGTCGCTGAG 59 NA Drosophila melanogaster 61 htl FBgn0010389 FBtr0083548 3 1 3 80 3R 13874285 13878234 CACTTTGTGAGGTGTTGCA 58 13874223 13874243 TCCATAGATCATTCGATGGCT 58 NA InUTR Drosophila melanogaster 61 pxt FBgn0038538 FBtr0083508 3 1 1 89 3R 13547547 13547626 CCATTCCAGTGTTGATGGT 57 13547677 13547697 GGATTGAACATCACATCTGGT 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 3 3 3 110 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636025 12636043 CTGGAAGCGAGTGTAGGTC 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083347 2 2 6 83 3R 12550978 12550997 CGGCATATCAACAGACATGG 59 12484783 12536291 AGACCATTTGTACCTAGCCAG 59 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 2 2 2 73 3R 12260779 12260857 TACGACAACCAACATCGAG 57 12260894 12260912 AGTTGATGGGATCGTATGC 57 NA DesignNoJunction Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 3 2 2 170 3R 11865107 11865125 AGTTGCACGGTGTTAACAG 58 11865258 11865345 GTTTGAGATCATGCTCCTCC 58 NA Drosophila melanogaster 61 dpr9 FBgn0038282 FBtr0089376 3 1 1 88 3R 10892379 10892397 CCTTCTCCAAGAACGTCAC 58 10889056 10892328 AAGCAACATCGTCTTATTGC 57 NA Drosophila melanogaster 61 CG14855 FBgn0038260 FBtr0082991 2 1 1 115 3R 10622597 10622685 AATACAGAGCTAAACTGGGTC 57 10622762 10622780 ATTCGATCACCAAGCAGAC 57 NA Drosophila melanogaster 61 HtrA2 FBgn0038233 FBtr0082987 1 1 1 97 3R 10336611 10336629 TACAGGTGAGGCTATCCGA 59 10336464 10336550 ATTGTTCACCTGTATGCGC 58 NA Drosophila melanogaster 61 CG9722 FBgn0038209 FBtr0082906 1 1 1 60 3R 9978779 9978801 CAAGCATAGGTACTCCATTAGTC 58 9978741 9978762 CATGTAAATATTTAGGGCAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9922 FBgn0038196 FBtr0082870 3 1 1 177 3R 9861380 9861398 AACGTGTGACGGATTATGC 58 9860987 9861171 AGCAGCTCGTTCATAATCAG 58 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 2 5 5 136 3R 9476211 9476540 ACAAGGGTGACTTTGAGCA 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 CG14377 FBgn0038148 FBtr0082756 3 1 1 126 3R 9223599 9223617 TCATCTGTTTGACCCTGTG 57 9223707 9223725 GAGTAGGTGGTAACCGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 3 2 2 82 3R 9093474 9093560 GATATGAGCGTTCGATCCGA 59 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 CG42573 FBgn0260793 FBtr0301436 2 1 1 119 3R 8957179 8957197 TTCCTGGAGCCTAAAGGAG 58 8954279 8957098 CAATTAATTGCCTTGAGCCAG 58 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 1 2 2 80 3R 8901963 8901986 GAAGACCCTGTATCAGTATATCCA 59 8902025 8902131 TGTCCTTTGTACAGCAGGA 58 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290273 2 1 3 80 3R 8793088 8793183 GATCGAAATACCAGAAACGGT 58 8793028 8793049 CCATATGTTTGAGTTTCTCCGA 58 NA InUTR Drosophila melanogaster 61 CG6359 FBgn0038065 FBtr0082641 2 1 1 131 3R 8454697 8454953 GGATAGCAAGATTGTGGTGC 59 8455047 8455065 TTGATGAAGGCCTCCAGTC 59 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 1 1 1 74 3R 8049058 8049163 TTCCGCAAGGTTATGTTGC 59 8049201 8049219 TTCAGTTGGTTCCGTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10005 FBgn0037972 FBtr0082507 3 1 1 173 3R 7801292 7801310 TAGAACCATACACCTGGGC 58 7801027 7801158 GCTAATTTCCTGTACTCTGTGG 58 NA InUTR Drosophila melanogaster 61 mthl5 FBgn0037960 FBtr0082515 1 1 1 80 3R 7711252 7712316 TCAATGAAACGGACTACTTCCA 59 7711193 7711214 TGACGAATTTGAACTTAACGGG 59 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082473 1 1 2 145 3R 7645365 7645449 AACATGTTGAGCATCACGG 58 7645558 7645576 AAGTACTTCTCGTAGCGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300580,FBtr0300581 2 2 2 60 3R 7452224 7452243 AAACGGTCATCTAGTTCGTC 57 7452123 7452201 TTTCTTGCAGCTTAGCTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 2 2 2 87 3R 7414840 7414858 GCATAAGTTCACGCACCTG 59 7414717 7414792 ATGAACCATAAGATCTTGCCTG 58 NA Drosophila melanogaster 61 CG6790 FBgn0037915 FBtr0082460 1 1 1 88 3R 7403612 7403692 TTATTTCGGCTCCCATGGT 59 7403542 7403560 TTTCGGTCACGTGTTTCAC 59 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100464 2 1 4 189 3R 7386919 7390171 GCTGATCACCCTAATTCCC 57 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14708 FBgn0037910 FBtr0082409 2 1 1 60 3R 7379960 7379979 CGCGTAAATTGAAGTTTGCC 59 7380002 7380020 TAGAGACTCGACAGCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6764 FBgn0037899 FBtr0082403 1 1 1 92 3R 7257195 7257213 AAATGCGCATTCAAACGTG 58 7257051 7257139 ACTTGAAGACCTTGCAGTC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6723 FBgn0037895 FBtr0082405 1 1 1 99 3R 7242616 7242696 ATGGAAATAGCGCTTTGGT 57 7242535 7242553 TAGGTAATGGCTCCTGAGG 57 NA Drosophila melanogaster 61 Ranbp9 FBgn0037894 FBtr0082386 1 1 1 80 3R 7240355 7240435 CATGGTTAAATTCGATGCTGAG 58 7240473 7240494 TATTTCAGGAATACAGCGATGG 58 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196,FBtr0273197,FBtr0273195 2 3 3 84 3R 7203837 7203855 CAAGATGTACTTCCCGGAC 57 7203901 7217260 GTAGAATTCTCGGAAGTTCGA 57 NA Drosophila melanogaster 61 CG10703 FBgn0037881 FBtr0082366 2 1 1 146 3R 7054324 7054342 ATCGAAATCACGACACTGC 58 7054128 7054214 CTTGCAACGTTCGAGTCTG 59 NA Drosophila melanogaster 61 CheA86a FBgn0261291 FBtr0091686 2 1 1 61 3R 6970746 6970831 GGAATACCCAAGTTATTGTTGC 58 6970706 6970724 GTCACCGACACAAAGATCG 59 NA DesignRelaxed Drosophila melanogaster 61 Fdh FBgn0011768 FBtr0082290 2 1 1 95 3R 6698045 6698063 TCCAGTCGTTCTCCATTCG 59 6697899 6697986 TGTGATAACCTTGCCCTCG 59 NA InUTR Drosophila melanogaster 61 Mcm5 FBgn0017577 FBtr0082279 1 1 1 80 3R 6615636 6615654 TCTACACTTCGGGCAAAGG 59 6615696 6615774 TGACAAAGTTACGCGTTTGAG 59 NA Drosophila melanogaster 61 tomboy20 FBgn0037828 FBtr0082316 3 1 1 60 3R 6561328 6561346 GAGACCCTGATCACAAACG 58 6561286 6561306 GTATCGCGTTGATTAGATGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 3 1 1 118 3R 6132958 6132976 CCATACGACCATCGAACGA 59 6133058 6133231 AAGATGCAGAAGCCATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Npc2c FBgn0037783 FBtr0082176 3 1 1 95 3R 5886201 5886219 GCAAATCGACGATTGTGAC 57 5886278 5886410 TTCATGGTATTGCGAGTGG 57 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0112576,FBtr0112577 1 2 5 92 3R 5808010 5808028 TTCCGATGCGTCTATCGAG 59 5808083 5812379 GGAGTCCTTTCCCAAATGTG 58 NA Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213 2 1 2 91 3R 5608122 5608140 ATGGGCGTAGGAGATACTG 58 5608191 5608272 GTACTCTGTAAGATAGTCGAAGG 57 NA Drosophila melanogaster 61 alphaTub85E FBgn0003886 FBtr0082087 2 1 1 127 3R 5558517 5558879 TTGATCATCATGAGGGAATGC 58 5558410 5558428 TTATCGGAGGGCATATGGC 59 NA InUTR Drosophila melanogaster 61 hb FBgn0001180 FBtr0081951 1 1 2 141 3R 4520258 4520279 GCAGCACCAATAATATACTTGC 58 4519855 4519873 CTGTCGTCTCCCAGTTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0290324,FBtr0081784 2 2 2 80 3R 3828158 3828285 ACGTATACGTGCTCATTTCCT 59 3828327 3828345 AGTGGGCACTATTCTCTGG 58 NA Drosophila melanogaster 61 Dpck FBgn0037469 FBtr0081638 1 1 1 80 3R 2908044 2908062 ACCATCAGCAAAGTGTTCG 58 2908106 2908209 ACCTGGTTCCACAATCTCC 59 NA Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 2 1 1 163 3R 2904129 2904561 CTTCATTCAAGCGTGGTGG 59 2903984 2904005 CATGTCGTTGATGTATGAGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1979 FBgn0026563 FBtr0081628 2 1 1 81 3R 2883463 2883481 AAGACGATGATGACTGCGA 59 2883522 2884150 GGAATTATAGAGAACGAGAGCTG 58 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 1 3 3 80 3R 2667000 2667019 GCAATGGAAAGAAGAACCCG 59 2651394 2666959 CATTGGCATTCACAGTACTCG 59 NA Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 2 1 1 128 3R 1936187 1936697 TTCCTGATCTGCAGTCAGG 59 1936077 1936095 AGATGAATACCGTTCCAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0078619 3 1 2 80 3R 1919998 1920016 ACAGTGTTCAAGATTGGCG 58 1919384 1919954 GTAGTAGTCCTCACACCCG 58 NA Drosophila melanogaster 61 ECSIT FBgn0028436 FBtr0078647 3 1 1 60 3R 1683264 1683283 CTGAATTAGATGAGCGGCAG 58 1683305 1683324 AAGAAGGGTACTTCGATGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 3 2 2 86 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748535 748678 GAACAAATACCTGGTGTACTCC 58 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 1 5 5 84 3R 452847 452870 CGATTGACTGGTATAAAGATAGCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 Fip1 FBgn0037255 FBtr0078928 2 1 1 80 3R 312604 312681 GAAAGATCAGCTGAGAAAGGAC 59 312721 312740 ATATCGTACCACCTGGTGTG 59 NA Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946,FBtr0301244 2 2 2 82 3R 251600 251618 AATGTAAAGGCCGATCCCT 58 251470 251555 AGTTGTTCCGGCTTATTCTC 58 NA Drosophila melanogaster 61 CR32385 FBgn0047205 FBtr0076899 2 1 1 85 3L 6970039 6970057 ATGTATAAGGTCGCTCGCT 58 6970101 6970286 GAGTAAGAACTCGGATATCAACAC 59 NA Drosophila melanogaster 61 Eip63F-2 FBgn0004911 FBtr0073162 3 1 1 60 3L 3935240 3935262 CAACTTAAGTTAGTTATCGGCGG 59 3935281 3935300 ATTAAGACCCGGTTAAGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40053 FBgn0058053 FBtr0111154 1 1 1 109 3L 24004412 24004430 TGCGTTGTCCCTAGTTCTG 59 24004249 24004339 GCACTGAAACCACATTCCG 59 NA InUTR Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 3 3 3 81 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885715 22885734 TGTATGCTAACAGGGTTCCG 59 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 2 3 3 81 3L 22885585 22885672 AATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 2 1 2 103 3L 22858908 22858981 TCTCACAGAACTATGAGGTCC 58 22859043 22860503 CGATTTGTTCTTGGTTTGATCC 58 NA Drosophila melanogaster 61 CG7442 FBgn0037140 FBtr0078471 3 1 1 86 3L 21931277 21931297 CTGAGAAACAGTCTGCTTAGC 59 21931345 21931428 ATACTTGGCCAGAAGAGGC 59 NA Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089580 1 1 2 60 3L 21827897 21827918 TACAACAACTTCGTCAAATCGG 59 21828573 21828594 CGTTGTTGTGCTTCTTAAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 2 3 3 80 3L 20989472 20989492 TTCTAACATTCGAGGAAGAGG 57 20989353 20989430 TGTCCATATGAGTGTCCCA 57 NA Drosophila melanogaster 61 CG33912 FBgn0053912 FBtr0091916 3 1 1 157 3L 20748660 20748730 TCACAGAGGTTTATTCCCTAGTG 59 20748525 20748549 TTTGGATATAGGTAGCTTAAGGAGG 59 NA Drosophila melanogaster 61 CG5078 FBgn0037005 FBtr0078208 3 1 1 60 3L 20500161 20500180 ACGGATGTTGAAACTCAAGG 58 20500202 20500221 TACACAATCCCGACATTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 2 2 2 80 3L 20439849 20439867 GAGGTCAGAACAATGCCTG 58 20439911 20439989 CGTTGATAAACTGACCGCC 59 NA Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 2 2 2 83 3L 20311906 20311983 TTTCTGAACATCACCACTTCC 58 20312026 20312046 GTTGTTCTTGATGGGATACCC 58 NA Drosophila melanogaster 61 gogo FBgn0052227 FBtr0074848 3 1 1 80 3L 20263599 20263618 TACTATCGGTGACCGAATCC 58 20263456 20263557 AATAGCAACCATTCGTCAGG 58 NA Drosophila melanogaster 61 CG14185 FBgn0036936 FBtr0074818 2 1 1 90 3L 20099532 20099550 GACACTGGACGAGCTACTG 59 20099670 20099689 GACTGTGTAAGAGATCACGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14186 FBgn0036935 FBtr0074870 3 1 1 83 3L 20094090 20094336 CCGACTTTAATCGCAATGG 57 20094025 20094044 ATATGTTCGAGATGAGCAGC 58 NA Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 2 2 2 139 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997628 19997646 CGGCATTGGTCTGATTAGC 59 NA Drosophila melanogaster 61 RhoGDI FBgn0036921 FBtr0074896 2 1 1 109 3L 19924379 19924398 AAGGTGTTCAGTACAAGGTG 57 19924467 19925092 CATCTTGTCAACATTAACACCC 58 NA Drosophila melanogaster 61 rept FBgn0040075 FBtr0074988 2 1 1 60 3L 19249612 19249630 GCACTAACTATCGCAGTCC 58 19249653 19249672 ATGATGATCATGCGATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rept FBgn0040075 FBtr0074988 1 1 1 60 3L 19249611 19249629 GGCACTAACTATCGCAGTC 58 19249653 19249671 TGATGATCATGCGATCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10424 FBgn0036848 FBtr0075033 2 1 1 80 3L 19090456 19090474 CATCCAGTGCTAGACTGTG 57 19090316 19090412 AGGTCCAATAACAACGACG 57 NA Drosophila melanogaster 61 CSN1b FBgn0027057 FBtr0075074 3 1 1 276 3L 18897889 18897907 AAATAGAAGCAGGATGCCC 57 18897559 18897578 GTTGTAGGTGGTTTGAACGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Chmp1 FBgn0036805 FBtr0075092 3 1 1 203 3L 18676982 18677000 TGTCTACGAGTTCCATGGA 57 18676726 18676744 TGAGGTAGTTAACCGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Met75Cb FBgn0028415 FBtr0075116 1 1 1 60 3L 18462664 18462685 ATGGTTTCTTGCTAGTCTTCCT 59 18462625 18462643 GTTGCTATCTGTGCATCCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 1 2 2 80 3L 17885509 17885528 GTGACGACCAACTTCATCAG 59 17885374 17885468 GCCAAAGATCATCAGTATGGC 59 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 3 2 2 139 3L 17503507 17503528 CGGTTACTGTGATAATAACTGC 57 17503628 17503710 CCATGGCCTTATCTTTGGG 58 NA Drosophila melanogaster 61 CG13728 FBgn0036716 FBtr0075238 1 1 1 91 3L 17375414 17375635 CCTGGTGTACACAATAATGTCTC 59 17375345 17375363 CGTTCAGAGATTGCTGCTG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 3 3 10 87 3L 16922174 16922198 CTATGAGGATGTTAACGATAGTGTG 59 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323,FBtr0075322 1 2 2 210 3L 16767352 16767370 GAACAGAAATCTCGCCCAG 58 16767607 16767625 TCATGTTAGCGATTGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 spd-2 FBgn0027500 FBtr0075363 3 1 1 141 3L 16587092 16587172 GGTGTCCAATTCTGTCTTGG 58 16586970 16586988 TTCTGGTTCCAATAGCGGT 59 NA Drosophila melanogaster 61 CG13042 FBgn0036602 FBtr0075433 2 1 1 60 3L 16301229 16301247 ATCATCCAACCGATTGTGG 57 16301187 16301205 AAGTCTTGATGATGGGAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34247 FBgn0085276 FBtr0112441 3 1 1 219 3L 16254589 16254675 TGAAGCTGCTGATCTTTGC 58 16254388 16254406 TAGTCGCTGCGATATTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG32155 FBgn0052155 FBtr0075459 1 1 1 86 3L 16228355 16228435 ATAAATGGAGTCTTGTTGCCC 58 16228483 16228501 CAAGTGGATGAGGTGTTCG 58 NA Drosophila melanogaster 61 CG33688 FBgn0053688 FBtr0091668 1 1 1 96 3L 16192716 16192736 CTTAAAGGATCCACGACAGTC 58 16192793 16192873 GACAACGTCCTTATATGGGC 58 NA Drosophila melanogaster 61 SsRbeta FBgn0011016 FBtr0075453 3 1 1 75 3L 16123356 16123374 CTACAAGGCTGTCGAGGAG 59 16123634 16123653 GTTGACAATTCCACCCTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 1 2 2 90 3L 16029720 16029741 CGAAATTTCAGCGAAATACTGC 59 16029792 16029885 TGTTCGATTCTCTGTCCGG 59 NA Drosophila melanogaster 61 Arf72A FBgn0000115 FBtr0075517 1 1 1 135 3L 15976570 15976588 CTCTACAGACTGCAGGTGG 59 15976681 15976973 GCCAATAAGGTCTAATACTTGTCTG 59 NA Drosophila melanogaster 61 pgant8 FBgn0036529 FBtr0075578 3 1 1 92 3L 15678620 15678731 AATTTCAAGGAACTACCGCC 58 15678784 15678804 GGAATCACTGTTAAATGTGGC 57 NA Drosophila melanogaster 61 mrn FBgn0261109 FBtr0075595 1 1 1 223 3L 15573356 15573374 TACTGTTCGTGGATCAGCC 59 15573096 15573114 GTTGGTCATAGGCCAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Toll-6 FBgn0036494 FBtr0075614 3 1 1 60 3L 15331904 15331922 GCGAGAACATGATTACCGT 58 15331945 15331964 CCATAGAGATTTCCCAGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13460 FBgn0036471 FBtr0114510 3 1 1 60 3L 15054490 15054508 TGTCCAACAACATCTTGCC 58 15054448 15054468 GATCCATAGGATCCATAGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 2 1 1 125 3L 14887315 14887335 AGATCTTTACCAAGTATCGCC 57 14887087 14887230 AACTCTGTCGTTTGGTTACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 1 2 2 61 3L 14786349 14786845 ATCATGAGCGATGAGGGTC 59 14786870 14786888 TCCAGTGTATAACCACGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9384 FBgn0036446 FBtr0075690 1 1 1 102 3L 14756204 14756311 CACTTGGCCATGTCATGTG 59 14756865 14756886 TCATCCTCATTCCTCCTATGAC 59 NA InUTR Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 3 2 2 104 3L 14555004 14555026 GCTGAGATCATATCAACACTCTC 58 14555088 14555160 TTTCGCTTCCTCAAATGTCTC 59 NA Drosophila melanogaster 61 snky FBgn0086916 FBtr0075827 2 1 1 97 3L 13169014 13169038 CCACTTAGTCGTAGAATTACTTCAG 59 13169090 13169183 CACCACTGATATTGAATCGGAC 59 NA Drosophila melanogaster 61 CG34428 FBgn0085457 FBtr0112729 2 1 1 81 3L 13055064 13055143 CTCGCGTCATGTTCATTGG 59 13055188 13055206 TTTAGGACATAGCCGGTGG 59 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089321 2 1 3 80 3L 12492581 12494277 AGGAACCTACAATTCGAAGGA 58 12492521 12492543 GTATCTATATGACGATAGCCCAC 58 NA Drosophila melanogaster 61 CG10660 FBgn0036288 FBtr0075976 3 1 1 84 3L 12481711 12481729 GGAAGAAGTCGTCGGAGAG 59 12481310 12481666 GTGACGGAACCTATATTTCTGC 59 NA Drosophila melanogaster 61 CG4328 FBgn0036274 FBtr0301071 3 1 1 84 3L 12285039 12285058 CAGTATGTGGTCAAACAGGG 58 12284918 12284996 CATAGAAATCGTATCCCTGTAGC 58 NA Drosophila melanogaster 61 CG5642 FBgn0036258 FBtr0076022 2 1 1 80 3L 12138340 12139065 AACCAACTCGGATTACTACGA 59 12138280 12138298 GCGTAGTAGTTCCTCTCGT 58 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 3 4 4 80 3L 11993786 11993864 CAAGTTTAACCTGAGCGAGG 59 11993725 11993745 TGCTTCTTGAACTGAATTCCG 59 NA Drosophila melanogaster 61 CG11570 FBgn0036230 FBtr0076065 1 1 1 60 3L 11950201 11950219 CCACTGCCTACCTATCCAC 59 11950159 11950179 TGGGATCATAAGGTATCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc68D FBgn0036203 FBtr0076119 2 1 1 91 3L 11765161 11765239 GCTAGTCGTAAGAGTCCTATGG 59 11765091 11765110 CTCTGGATCCAAACGATTGC 59 NA Drosophila melanogaster 61 mtTFB1 FBgn0261381 FBtr0302272 1 1 1 82 3L 11702517 11702535 GAAGTCGTTGCACAACAGG 59 11702644 11702662 GAATTGTGGGCATTGGAGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32071 FBgn0052071 FBtr0076231 3 1 1 104 3L 11096906 11096924 TATCCCTGGTCATCTTGGC 58 11096820 11096839 AAGTGGATGAGCTACTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir67c FBgn0052058 FBtr0076293 3 1 1 60 3L 10425746 10425766 ACATGGATTACCGTATGTGGA 59 10425706 10425725 ACCAGATTCAAAGATTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935,FBtr0076370 3 2 2 157 3L 9828526 9828923 CTAGTGGAGAAACTCCGCA 59 9828331 9828349 TCAAACTCGCGATAGTGGG 59 NA Drosophila melanogaster 61 Ilp3 FBgn0044050 FBtr0076373 3 1 1 83 3L 9794899 9794989 CCAAGAGAACTTTGGACCC 58 9794834 9794855 TATCACTCAACAGTCTTTCCAG 57 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 3 3 3 81 3L 9721525 9721618 GAAGAGAAGATTTACGCTTCACTC 59 9721657 9721676 CACATAGGTGAATCCGTCCT 59 NA Drosophila melanogaster 61 CG34426 FBgn0085455 FBtr0112727 3 1 1 81 3L 8796300 8796320 GAAGACACCTATTGCCAAGAG 58 8796360 8796446 AGTAGATGTAGCTAGTGCACAC 59 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 3 2 2 94 3L 8669372 8669391 CCAACATGACCAACGTTCTG 59 8669448 8670489 CATGATGGGCTTGTTCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Arp66B FBgn0011744 FBtr0076737 3 1 1 110 3L 8108435 8108516 TCCATCAAGTATCCGGTGC 59 8108343 8108361 GTAGTGATCCTCAGGCTCG 59 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 3 2 2 80 3L 8082713 8082790 AGTAATACGACTACTAGCTTGC 57 8082654 8082672 ACTCTTGATGCCAATGTCG 58 NA Drosophila melanogaster 61 CG8038 FBgn0035831 FBtr0076763 3 1 1 60 3L 7971479 7971498 ACCAAGCAGATGAAGTACGA 59 7971438 7971456 GTACATAGCCCTTCCACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7492 FBgn0035807 FBtr0076821 2 1 1 133 3L 7646663 7646682 CCAGTTTCGGTATCTAGTGC 58 7646489 7646567 AATGTACTTCACCCGTTGC 58 NA Drosophila melanogaster 61 Cyp4d8 FBgn0015033 FBtr0076832 2 1 1 80 3L 7487057 7487136 TCAAATACACCCATTCCGTG 58 7486996 7487016 GATGTACACCAAAGATTCCGA 58 NA Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 2 2 2 147 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327859 7327878 GAGAAGTTGCCGTAGATGTG 58 NA InUTR Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 1 2 2 110 3L 7315586 7315662 GTTGAAAGAATCCGTCAAGG 57 7315495 7315513 TTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 CG15829 FBgn0035743 FBtr0076913 3 1 1 91 3L 7122048 7122140 CAACATGCCCACCTTTGAG 59 7122195 7122213 AGTAGCCGTAGAACTCGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 D19B FBgn0022699 FBtr0077017 1 1 1 109 3L 6177054 6177072 ACTTGCTACCCTTCCAGTG 59 6176903 6176921 ATGCATAGCCGATGTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Lcp65Af FBgn0020639 FBtr0077057 3 1 1 107 3L 6129816 6129835 GTTCCTGATTGTCTTCGTCG 59 6129670 6129749 GTCTCGTAGCCATAGTTAAAGC 59 NA Drosophila melanogaster 61 Jon65Aiii FBgn0035665 FBtr0077041 3 1 1 61 3L 6044099 6044117 AACACCTGGGTTCTCACTG 59 6044200 6044219 TAGTAAATGGTCACAGCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076,FBtr0077075,FBtr0077074 3 3 3 204 3L 5924805 5924823 GCCGATCATTTGGTCATCC 59 5924560 5924579 TGAATGTGCAGTAGTTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 lin-28 FBgn0035626 FBtr0077090 1 1 1 93 3L 5649478 5649496 TGCAAATGGTTCAACGTGG 59 5649553 5649720 ACATCTGGATGACGCTCTG 59 NA Drosophila melanogaster 61 CG4611 FBgn0035591 FBtr0077165 1 1 1 94 3L 5131379 5131453 CCATTGATGCCAGACATCC 58 5131511 5131529 CTGCTCCTCGTAGTACAGG 59 NA Drosophila melanogaster 61 CG15022 FBgn0035547 FBtr0073333 3 1 1 91 3L 4460171 4460253 AAGGAAATGAAACCCATGCTG 59 4460100 4460118 TAACCTCCTCCGTACAGGT 59 NA InUTR Drosophila melanogaster 61 CG1316 FBgn0035526 FBtr0073233 1 1 1 80 3L 4285762 4285857 AAATCAAGGTCATGGAGGC 58 4285901 4285919 CTCAGTTCCGTCTCAATCG 58 NA Drosophila melanogaster 61 mas FBgn0011653 FBtr0073260 3 1 1 81 3L 4164574 4164653 ATTCCAGCCAAACATATGAGC 59 4164513 4164531 ACGTACTGGAACTCTTGGC 59 NA Drosophila melanogaster 61 CG12766 FBgn0035476 FBtr0073172 1 1 1 80 3L 3939527 3939549 CCTTTCTCCTATAAATATCGCGG 59 3939350 3939490 ATCAATGTCTACAAGTTCCACC 58 NA Drosophila melanogaster 61 Eip63F-1 FBgn0004910 FBtr0073174 2 1 1 82 3L 3913906 3913924 ATGAGGACAGCAAGGACAG 59 3913765 3913862 ATCGAATACTCTAAATGCGGC 58 NA Drosophila melanogaster 61 CG1120 FBgn0035462 FBtr0073148 1 1 1 80 3L 3806941 3806962 CAATACGAGGCTTATCTACTGG 58 3807003 3807074 ATTGGTGGCTATAGCACTG 57 NA Drosophila melanogaster 61 CG10357 FBgn0035453 FBtr0300062 3 1 1 80 3L 3615613 3615708 CTGAGAAATGCCTATACTGCT 58 3615748 3615768 GGGATAATCTAGATTGGCCAC 58 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 1 4 4 80 3L 3365682 3365700 GCGCAAGATATCCTTCCAC 58 3365744 3365821 CTCGACTGTTGCTTCATGG 58 NA Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 3 2 2 155 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324490 3324510 TAGGGTCGGTAGTACTGAGAG 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107 1 1 2 88 3L 3198855 3199000 GCTGAAAGTGAGATTGTGCT 58 3198786 3198804 TATTTGCTGGCCTTCTCGT 59 NA InUTR Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123,FBtr0073122 3 2 2 81 3L 3113975 3114051 GATACTCATCCTTGGGCTACTC 59 3113915 3113933 GTAGCGGCATCCTCTACTG 59 NA Drosophila melanogaster 61 CG12093 FBgn0035372 FBtr0073015 2 1 1 86 3L 2773294 2773406 ATGGCAAGAGCAATCTTGC 59 2773226 2773247 AGCTGTGATTACTACTGATGCA 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 3 2 2 80 3L 2389944 2389965 TGTTCAGAGGAATGGATTACCA 59 2389825 2389905 TGGCTTGATAGTAGGTCTGTC 59 NA Nonspecific Drosophila melanogaster 61 CG5691 FBgn0035297 FBtr0072854 2 1 1 80 3L 1962338 1962422 TCTGGCCCAGCTAATACTC 58 1962276 1962294 CCCAGTTTATCGGTGAGGA 58 NA Drosophila melanogaster 61 CG1887 FBgn0035290 FBtr0273261 2 1 1 92 3L 1894384 1894402 CTTAAAGTGACACGTGCCA 58 1894252 1894328 CTCAGAGATGCCCTCTTCC 59 NA Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072832 1 1 2 122 3L 1857293 1857311 AAGATGTTCCCGGACATCG 59 1857395 1857476 CAGTTTCTCGTTCTGGTTGTC 59 NA Drosophila melanogaster 61 CG13936 FBgn0035282 FBtr0300713 3 1 1 123 3L 1851961 1852059 ACCAGTTGAAGTACCAGCA 58 1851856 1851874 AAGTCATCGTAGTCCACGG 59 NA Drosophila melanogaster 61 mRpL46 FBgn0035272 FBtr0072776 3 1 1 62 3L 1777725 1777744 CAAGCATGAACGTGAGATCG 59 1777769 1777787 AAGTCCACCTGGATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13920 FBgn0025712 FBtr0072761 3 1 1 87 3L 1650774 1650793 ATACCCTCGAAATGGTACCG 59 1650839 1650921 TGACCTTATGATAGGGAATCAGC 59 NA Drosophila melanogaster 61 CG12003 FBgn0035234 FBtr0072744 3 1 1 97 3L 1565542 1565564 GGATTAAAGCGATGAGAAGATCG 60 1566225 1566243 GATTATCGTGGCTCCATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 rho FBgn0004635 FBtr0072694 3 1 1 180 3L 1465815 1466502 TCATTGAGATTGCCATCTTCG 58 1466644 1466662 ATATTGAAGCCCAGGTGGA 58 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 3 2 2 83 3L 1435040 1435059 CTACTTGAAAGTGGTGTGCC 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 Klp61F FBgn0004378 FBtr0072733 2 1 1 84 3L 1244992 1245204 CCTGGGAAGATGACTCTGAC 59 1244927 1244945 TACTCCACCTCCATCATGC 58 NA Drosophila melanogaster 61 CG9194 FBgn0035192 FBtr0072651 3 1 1 83 3L 1236711 1236729 CGTGGTTTCCTATTGCGTG 59 1236775 1236853 TGTATGTCTCGCTTCACCTC 59 NA Drosophila melanogaster 61 bab2 FBgn0025525 FBtr0072639 3 1 1 106 3L 1143427 1143446 CATCCGTAGCGTCATTAAGG 58 1142912 1143360 CGATATAGGTACCATGACCCT 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 1 6 6 80 3L 998875 998894 CCGAATACATAGTCAGTGCC 58 998722 998833 AGTTACTCAGATCCAGACGA 57 NA Drosophila melanogaster 61 MED30 FBgn0035149 FBtr0072558 2 1 1 60 3L 653280 653298 TCTACGAGAAGTGCAACGA 58 653238 653256 TAGGGAATCAGACTCTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13893 FBgn0035146 FBtr0072562 2 1 1 86 3L 600857 600876 CACGACGATTACTTCTTGGT 58 600656 600737 TTTCAAACTAGCTCTCAGCA 57 NA Drosophila melanogaster 61 CG34263 FBgn0085292 FBtr0112458 2 1 1 82 3L 265753 265771 ATCGTCGACAAATGAGCAC 58 265633 265707 GTTTCCAATCCTTTCCCGT 58 NA Drosophila melanogaster 61 mRpL17 FBgn0035122 FBtr0072503 3 1 1 139 3L 264921 264939 CTGAAGAATGTCGATGGCC 58 265042 265122 TTGGAAATGAGCAGTTCGG 58 NA Nonspecific Drosophila melanogaster 61 Tudor-SN FBgn0035121 FBtr0072519 2 1 1 81 3L 259904 260319 AACAAGGAGACACTTCCGA 58 259841 259859 CATACTCCGTAGCGTAGGG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-A2589c FBgn0086025 FBtr0114301 3 1 1 72 2R 17219092 17219113 AAACTGTCACTGATAGTTGGAC 58 17219145 17219164 CAAATGCGAACATCCTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841a FBgn0086669 FBtr0091766 1 1 1 60 2R 17214614 17214635 TGTAAGCTTGCTAGAATAAGGG 58 17214656 17214674 TGGGCTGAAGATAGTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A2589a FBgn0086023 FBtr0114299 2 1 1 85 2R 17212741 17212761 TCATACTGAGTGCCTAAATCG 57 17212808 17212826 TATCAGACAAATGCCTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33429 FBgn0053429 FBtr0086421 1 1 1 60 2R 15625685 15625703 ATACATCGGTTCTCGTCCG 59 15625643 15625661 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30370 FBgn0063356 FBtr0088797 1 1 1 80 2R 4152685 4152816 GGGTATGATTGACAACGCC 59 4152854 4152878 GAATATAGTTCCTCAGAGTCATTCC 58 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 3 2 2 92 2R 20828708 20828726 TGAATTCCCTGGACAACCT 58 20828567 20828652 ATGGAACGGTTCCTTCTCC 59 NA Drosophila melanogaster 61 NaCP60E FBgn0085434 FBtr0112670 2 1 1 80 2R 20792844 20792865 CAATCTGATGTTGGCTGTAGTG 59 20792902 20792979 AAGAGATCCTTCTTACGTTCCTC 59 NA Drosophila melanogaster 61 SerT FBgn0010414 FBtr0072362 1 1 1 121 2R 20294900 20294975 GAGTTCTTTGAGCGAAAGGT 58 20294798 20294816 AGGGAGAAGTAGACCAGGA 58 NA Drosophila melanogaster 61 CG3121 FBgn0034957 FBtr0072161 2 1 1 80 2R 19905272 19905292 ACATTGGCTATGAGTTGAACG 59 19905332 19905434 GATGATCGAACAAGTTGTCCC 59 NA Drosophila melanogaster 61 PHDP FBgn0025334 FBtr0072224 2 1 1 81 2R 19771319 19771340 CCCACTACCCAGATATCTACAC 59 19770991 19771277 TGGAACCAGACCTGAACTC 59 NA Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 2 2 2 127 2R 19767765 19767784 AGTCAGCATGTGATACCCAC 59 19767874 19767968 GAAGATTCCCAGGCTCTGG 59 NA Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072100 2 1 2 60 2R 19572548 19572566 GAGCACGGATATGTCTCCC 59 19572444 19572524 GGTTGACATCACTTGGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 1 2 2 80 2R 19571124 19571143 CTCAACAACTGCGATTTCGA 59 19571186 19571267 AACGGAGTAACCGAACTCG 59 NA Drosophila melanogaster 61 levy FBgn0034877 FBtr0072061 2 1 1 221 2R 19435824 19435842 TCTAAACCACGCAATTCGC 59 19436178 19436196 AGGTAGTCGTACTTGACGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG5357 FBgn0034862 FBtr0072017 2 1 1 60 2R 19344566 19344584 TGGAGAGCTCATTCGTGAC 59 19344606 19344626 GCCTGTTTGACACCAATATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111,FBtr0072024 1 2 2 101 2R 19310032 19310050 CTACTCGTGGTCATGTCCC 59 19309786 19309967 CAGCAGCGTATCATTCAGC 59 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071954,FBtr0071955 3 2 3 88 2R 18947708 18947726 CTCCACCGTGGTCATAAGG 59 18947778 18947854 CAATGTACTGTCCCACCGT 59 NA Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071857 1 1 2 80 2R 18496124 18496198 GTAAGTTGGTGCAATTGAAGC 58 18496240 18496258 GATCATTCTCCAACTGCGT 57 NA InUTR Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0071838,FBtr0112820 2 3 3 79 2R 18428465 18430835 GGCATCTCATAAACCGGAG 58 18428404 18428422 CGAAAGTGGTTCTTTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 ppk12 FBgn0034730 FBtr0071830 1 1 1 80 2R 18316679 18316815 GAGTTCTTGTCAAACGTCGG 59 18316856 18316876 GAAGTATAGGATCTCGGCCAG 59 NA Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840 2 1 2 95 2R 18313877 18313897 TATACATGTGGGTCATCCACG 59 18313744 18313820 ACTCCATAAGCCAGAGCAG 59 NA Drosophila melanogaster 61 CG11291 FBgn0034713 FBtr0071773 3 1 1 118 2R 18099583 18099601 TACAACGCAAGCCTATCGT 59 18099680 18099755 GTCTGATTTAAGCGAGTTTCCA 59 NA Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928 2 1 2 103 2R 18001830 18001849 TTCTCCACATATGATCGGGA 58 18001915 18001995 TTAAGGTTGCTGTCCAGAC 57 NA Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 2 2 2 80 2R 17709904 17709988 GCAATCGTGAGATCTTCCC 58 17709842 17709861 GATCCGATTCACAACTGGAG 58 NA Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666 2 1 2 98 2R 17557771 17557789 AATACAACGCACGCTTTCC 59 17558057 17558076 GTGAGATGATAACAGGCACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071685 1 1 2 114 2R 17538919 17539021 AACATCCGGGTACAGAAGG 59 17538823 17538841 CATGTTGAACAGTGCGTCC 59 NA Drosophila melanogaster 61 CG30287 FBgn0050287 FBtr0071695 1 1 1 146 2R 17425350 17425368 CCAGCGGACTTATTCTCCA 59 17425108 17425179 CAAACGCACTGTCAATTGAC 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 2 6 6 80 2R 17299910 17367603 AAGATCAGAAATCGGTGAAACC 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 cv-2 FBgn0000395 FBtr0071610 3 1 1 86 2R 17246680 17251212 GAATGCCAGAACGGATTCG 59 17246612 17246633 GCAAGTTCCATTCGACTTATCC 59 NA Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 3 2 2 111 2R 17012649 17012670 GTTTATCAACCTGGCGAATCTC 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 2 1 1 282 2R 16947946 16947964 CTCAAGTTTCCGTCGAACC 58 16947625 16947700 TTCCTTTATCCTTGCTGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 2 2 2 91 2R 16861134 16861425 CTTTATGGCCGCTTTACCG 59 16861061 16861080 GTGTCTCCGTAATCAGTCGA 59 NA Drosophila melanogaster 61 CG18065 FBgn0034519 FBtr0100677 3 1 1 80 2R 16439322 16439410 GCAAATAATTTGGGTTCTGTGG 58 16439204 16439222 GTTCTTCAGGGTTTGGTGC 59 NA Nonspecific Drosophila melanogaster 61 CG18067 FBgn0034512 FBtr0086216 3 1 1 76 2R 16422093 16422172 TAGCGCTGCGAATATACAG 57 16422211 16422230 CTCCGTTTGATAGGAAGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9143 FBgn0034496 FBtr0086304 3 1 1 115 2R 16164987 16165008 TCTACTCAAGGTTCTCAATTCG 58 16164835 16164911 CATTTCGCTTCTGCATGTG 58 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319,FBtr0086318,FBtr0086317 2 3 3 88 2R 16143063 16143140 TCACTCAGGGAAATTGAATTGG 59 16142996 16143017 CAGGAGTGTATGTAGAAACCCA 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 2 3 3 81 2R 15554183 15554202 ATCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 CG11018 FBgn0034464 FBtr0086472 1 1 1 71 2R 15550055 15550073 GGTATGCAATCCTCCAAGG 58 15550161 15550179 CAACGACTCCTTGTACCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10081 FBgn0034441 FBtr0086524 2 1 1 80 2R 15274606 15274689 GAATACGGAAACCTTATTGGTCTG 59 15274726 15274746 ATCGATGCGATCATACTTGGT 59 NA Drosophila melanogaster 61 CG9416 FBgn0034438 FBtr0086555 3 1 1 80 2R 15256837 15256923 CTGGAGAATCCATCGAAATACG 59 15256778 15256800 CTCCGGATAATAGACAAAGAACC 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290311,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 2 12 12 97 2R 15059778 15059864 CTGATATGCTCATCACCTTTGAC 59 15059921 15059939 CTTGTAGTGGGAGGTCTCC 58 NA Drosophila melanogaster 61 CG10927 FBgn0034360 FBtr0086705 3 1 1 60 2R 14501399 14501419 TGAAGACTACAAAGACCTGAC 57 14501440 14501459 GTCCACTTCTTTGCATTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17669 FBgn0034352 FBtr0086722 2 1 1 60 2R 14341581 14341600 ATCCCGAGTCCTTTAACCTG 59 14341540 14341558 GCATTTCCGTAGAGGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 3 3 8 97 2R 14311984 14312387 AGCACTGTATACCAACGCA 59 14312448 14312466 AGTTTCGACGAAATGCCAC 59 NA Drosophila melanogaster 61 olf186-M FBgn0015522 FBtr0086799 3 1 1 60 2R 13735410 13735428 GGCCATACTCATCAACCTG 58 13735452 13735470 TATCCGCGACAGCATATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086796 2 1 5 73 2R 13738941 13738959 CCCTTCCTCACAGAACCAG 59 13742672 13742693 CGACGACGTATATTCAAATTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086797,FBtr0086795 1 2 5 145 2R 13738942 13738960 CCTTCCTCACAGAACCAGG 59 13745250 13745268 CTGGATGCCTTTAGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 rhi FBgn0004400 FBtr0086897 3 1 1 89 2R 13519520 13519538 GGAAGCGTATCCATTGCAG 59 13516243 13519469 TTGTACAAACCCGGTACTAGG 59 NA InUTR Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 2 2 2 83 2R 13405924 13406004 CTACACCAAGTATAACAAGTTGTCC 59 13406043 13406063 TTGAAAGGTTCTGAAGCATCC 58 NA Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 2 2 2 80 2R 13403018 13403094 ATGCGGTTTCTATCCTAAACAC 58 13403135 13403153 TGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 Sip1 FBgn0010620 FBtr0086909 3 1 1 119 2R 13282523 13291406 GTTTAAGCGAAGTCAAGATGTC 58 13291486 13291504 CATAGCCATCGAAATCGGG 58 NA InUTR Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 2 2 2 115 2R 12976596 12976615 CTACTTCAGTGATTGCCCTG 58 12976441 12976518 CAGGTGGATACCAGATGGA 58 NA Drosophila melanogaster 61 CG30459 FBgn0050459 FBtr0087015 3 1 1 148 2R 12921029 12921047 CGTTCTGAACGTTATGGCG 59 12920834 12920919 TGATGTTTCGTTAAGTCGTCC 58 NA Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 3 3 3 94 2R 12905298 12905579 TGCCTTAACCAGAATCCGG 59 12905222 12905240 ATGGAGAGCACGAATTGGT 59 NA Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 1 2 2 129 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885786 12885806 CTTCCATATCTGTAGCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0113379,FBtr0087112,FBtr0113381,FBtr0087113 3 5 5 80 2R 12566690 12566710 GTACTACTATCATCGCATCGG 58 12566565 12566648 TTGAGATCGTTACGGAGCT 58 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 2 3 4 61 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304339 12304357 ATCAATCCCATGATGCCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087145 2 1 5 110 2R 12224345 12224366 GCCCTGGACCATTAATATTAGC 59 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 1 2 2 80 2R 12034718 12034736 CTGTAGTGCCATCATTGCA 58 12034592 12034675 ATGGAAAGGTGGATAAGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG8414 FBgn0034073 FBtr0087255 1 1 1 109 2R 11987134 11987210 GTTTGGGAATAGGTGTGGT 57 11987043 11987061 GCCGAGGATAAGACAATCC 57 NA Drosophila melanogaster 61 Cyp4aa1 FBgn0034053 FBtr0114558 2 1 1 93 2R 11832862 11832880 GTTCTCCTCTCGCTGAGAC 59 11832937 11833022 CACATCTGCGCATCAAGTC 59 NA Drosophila melanogaster 61 Cyp4aa1 FBgn0034053 FBtr0114558 1 1 1 93 2R 11833307 11833325 TACGAGAATCTGGATGCCG 59 11833379 11833460 AAACGGCCTCATTTAGTATGTC 58 NA Drosophila melanogaster 61 CG33461 FBgn0053461 FBtr0302528 3 1 1 81 2R 11583438 11583458 ATACGATCCCAAGGACTTCTC 59 11583496 11583581 GGGTTGGATATGATATGTGTACTC 58 NA Drosophila melanogaster 61 CG8180 FBgn0034021 FBtr0087359 2 1 1 82 2R 11361244 11361402 GCTTGAAGATCGGTGATGAG 58 11361181 11361199 GTTGCTGTACGGACAATGG 59 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 1 2 2 80 2R 11109920 11110009 ACGCTTTCAAGACATTGCT 58 11110053 11110071 ACTTTCAGCGACTCTACGT 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110998,FBtr0110999,FBtr0110997,FBtr0110995,FBtr0087426 2 6 6 80 2R 10835448 10835468 CTTGCTCTATGAGATGTTGGC 59 10835331 10835406 TCCTCAGTGTTCTGATCGG 58 NA Drosophila melanogaster 61 Ciao1 FBgn0033972 FBtr0087460 3 1 1 60 2R 10741617 10741638 TTCGTATCTTTAAGGAGAGCAG 57 10741578 10741596 GTTATCTGCTCGAACGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10202 FBgn0033969 FBtr0087464 3 1 1 239 2R 10706417 10706507 AACCAAATCCGGAAGAGGG 59 10706196 10706215 TTATGCAATTGGTCACTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG30480 FBgn0050480 FBtr0087478 1 1 1 60 2R 10564875 10564895 GCCTACAGGTTATATTCCCAG 57 10564835 10564856 GACATTCTCGACAATAGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12861 FBgn0033953 FBtr0087481 3 1 1 60 2R 10552416 10552435 TGCGAGTGCTATATGATACC 57 10552375 10552396 GTCTATTCGGATAGCATTTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12861 FBgn0033953 FBtr0087481 2 1 1 60 2R 10552416 10552436 GTGCGAGTGCTATATGATACC 58 10552376 10552397 TCTATTCGGATAGCATTTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10139 FBgn0033951 FBtr0087433 3 1 1 78 2R 10533020 10533040 ACCAAGAAGCATATGAAGCAC 59 10533137 10533155 CGGATGACCTGTTTAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087484 3 1 2 81 2R 10527950 10528060 AGAGAAGGACAACTTAGACCAG 59 10527890 10527913 GTCAAAGATCTCATAAATCTCCCG 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089618,FBtr0089615,FBtr0089621 1 7 7 98 2R 10490079 10490097 TCGCTACGACCGTAATCTC 59 10489938 10490017 GAAGTTCGACGTAGTTGCG 59 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257,FBtr0089258 1 2 2 80 2R 10389331 10389410 AACTAGAGGTGTATGGTTCTGG 59 10389272 10389290 TTAGACTGTCGCACACCTC 59 NA Drosophila melanogaster 61 CG6337 FBgn0033873 FBtr0087646 2 1 1 81 2R 9722517 9722536 TAACCATCGACAGTGGATGG 59 9722335 9722476 GTCTTGTTGAAATTGTCCTCGT 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 2 4 4 112 2R 9717360 9718064 CTGCATACAAGTGACCACTG 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 cbc FBgn0033842 FBtr0087701 3 1 1 99 2R 9371544 9371562 TAATCCATCATGTGCTGGC 58 9371395 9371481 ATATCCACTTCGGTTACGC 57 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299741,FBtr0299740 2 2 6 107 2R 9152885 9152970 CATATACAAGCAATCCACTTGC 58 9153038 9153056 CCTTCACGAACTCACTCCT 59 NA InUTR Drosophila melanogaster 61 CG4663 FBgn0033812 FBtr0087761 2 1 1 158 2R 9116917 9116935 CTGGACTCCACATTCTTCG 58 9116722 9116798 CAGCCAATAGAGAATCTTTCTG 57 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 2 3 3 68 2R 8810273 8810292 TATGCTCTGCAAACGTTCTG 59 8810391 8810409 ATACTTGAACCAACGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8778 FBgn0033761 FBtr0087880 1 1 1 85 2R 8539594 8539612 GAGCGGATTTGAAAGAGCG 59 8539464 8539482 AATGGCAATAAGCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33632 FBgn0053632 FBtr0091609 3 1 1 85 2R 8409953 8409971 TCCCAATCCGATTGCTCTG 59 8410015 8410090 CAAGATCATGGTTATAAGGACAGG 59 NA Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087933 1 1 2 174 2R 8341397 8341415 GAAGTGAAGCTATCGGTGC 58 8341553 8351856 AGGTGGCACTATCAGTTGG 59 NA Drosophila melanogaster 61 128up FBgn0010339 FBtr0087976 2 1 1 85 2R 7926100 7926186 GCCAAGGAATTTAAATATGCGC 59 7926232 7926250 TCGTTGAGAACGTGTTCGA 59 NA Drosophila melanogaster 61 cuff FBgn0260932 FBtr0088034 1 1 1 115 2R 7774348 7774436 ACAACATTGAATGGGTCTGC 59 7774514 7774532 TTGACCCACCACTTAAGGG 59 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071,FBtr0113072 3 2 2 80 2R 7771346 7771364 TTAGTGTTCCCGGATTTCG 57 7771227 7771304 CTGATTTGTTTGTACGCACTG 58 NA Drosophila melanogaster 61 epsilonTry FBgn0010425 FBtr0088160 3 1 1 60 2R 7233020 7233039 CTGGAGATCATCGATGTGTC 58 7232979 7232998 TGATCTTCTTTCCGTATCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or47a FBgn0026386 FBtr0088111 2 1 1 197 2R 7138917 7138936 GAGAACCTGAAGACGGAGAG 59 7139095 7139185 GCGAACAATCGATGAGAAGG 59 NA Drosophila melanogaster 61 CG12325 FBgn0033557 FBtr0088227 2 1 1 80 2R 6712698 6712774 TGATGTCAACAGATACCGC 57 6712816 6712836 GAGTAATCCACAGCTACACAG 58 NA Drosophila melanogaster 61 CG12340 FBgn0027499 FBtr0088253 3 1 1 81 2R 6689154 6689751 AGTTCCTACTACCTCGACCT 59 6689092 6689111 ACTTTAGTTGTGCACTTCGG 58 NA Drosophila melanogaster 61 trsn FBgn0033528 FBtr0088306 2 1 1 80 2R 6367095 6367176 GCAGTACTACAGATACTCCG 57 6367034 6367053 TCCAGGTAAATAACCAAGGC 57 NA Drosophila melanogaster 61 CG12897 FBgn0033517 FBtr0088317 1 1 1 176 2R 6300371 6300389 TTCGGGATCGATACACCTG 59 6300083 6300101 TGATCCAGAAGATGCCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12913 FBgn0033500 FBtr0088335 1 1 1 80 2R 6141712 6141732 CGACGTGGACATTATGTTCAC 59 6141771 6141852 GGGTAGTAGACCTTCTTTCCAG 59 NA Drosophila melanogaster 61 CG2292 FBgn0033479 FBtr0088431 3 1 1 122 2R 5953208 5953226 CATGGAATGACGGATTCGG 58 5953046 5953064 CATAAATGTTCGCCCTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 hebe FBgn0033448 FBtr0113061 1 1 4 90 2R 5717352 5721021 AATTATAGAGCGAACGACGGA 59 5717282 5717300 GTTGTTGATTGTCTCGGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1690 FBgn0033442 FBtr0088496 2 1 1 150 2R 5645242 5645328 AGAACAAGGAGACCCAGAC 58 5645110 5645128 CACGATACGCTGTGATTCG 59 NA Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 3 2 2 131 2R 5473113 5473131 GAAGAGAATACGCGACGAG 58 5473285 5473303 CCAATAACGTCGTAGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1809 FBgn0033423 FBtr0088520 3 1 1 85 2R 5450836 5450855 CTTACCTCCGAGGATGACAC 59 5450901 5450989 TGGTCACGATAAGGATAACCA 58 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0299846,FBtr0301766,FBtr0300527 1 5 5 80 2R 5361638 5361656 TTACGCTGCTAAATCGCCT 59 5361700 5361779 CAGTGTTGTCGGTTGTGAG 59 NA Drosophila melanogaster 61 alc FBgn0260972 FBtr0088624 1 1 1 86 2R 5023207 5023284 GATACACCGCTATCGTGTG 58 5023139 5023157 ATCCTTGATAGACAGGGCG 59 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290279 3 1 2 207 2R 4837398 4837419 CTCCTAGCATCAAATCTAAGGG 58 4836308 4836326 TAAGGCTGAACGAGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 gcl FBgn0005695 FBtr0088710 1 1 1 80 2R 4615272 4615362 CAGGAGGATTGTAGTCCTCAG 59 4615404 4615422 CTCAAGCAACATACGTCCG 59 NA Drosophila melanogaster 61 CG8738 FBgn0033321 FBtr0088705 3 1 1 118 2R 4584620 4585165 GCGATCAGATAGAGGAGGG 58 4585247 4585265 ATTGTTGTAGCCATCCAGC 58 NA Drosophila melanogaster 61 CG33087 FBgn0053087 FBtr0088791 2 1 1 82 2R 4110983 4111001 ACTTGCTGAAGGGCTATCG 59 4111043 4111132 GGCGCAAGGATTACTTATATTCC 59 NA Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876 1 1 2 191 2R 3849379 3849397 TCGATAGACAACTGAGGCG 59 3849146 3849164 ATGAACCATTTCGCCAGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 3 1 1 70 2R 3836024 3841425 GCAGTTTAAAGAGTTCCAGGA 58 3835974 3835993 ACTTTGGGTCTATTTCGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8728 FBgn0033235 FBtr0088882 2 1 1 80 2R 3825204 3825278 GGATTAGTAAAGGAACAATGCG 57 3825145 3825165 AAATCCGAGAATTACATGGGC 58 NA Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0113374 3 1 2 105 2R 3818097 3818176 CGTTTGAAGAGGTTAAATGCC 58 3818012 3818030 TAATCTTTGGTGTACCGCG 58 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 3 2 2 120 2R 3803019 3803416 AGGGTTTATAGGCTCCGAC 58 3802917 3802936 CCTCTTCGTCACTATTCACG 58 NA Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 2 2 2 118 2R 3718955 3719035 CTACCAAGTGGAGTACGCC 59 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18853 FBgn0042173 FBtr0089426 2 1 1 298 2R 3717029 3717109 CAAGGTCAGAGCAATTATACCA 58 3717368 3717386 TAGTGCTCGTTGTAGAAGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG1550 FBgn0033225 FBtr0088899 1 1 1 60 2R 3698330 3698349 GGCTTACTACCAAACGAGAG 58 3698289 3698307 CCAGGGCTTGATAATCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 2 3 3 144 2R 3479247 3479265 AGGATCCTTGTGAGCTGTC 59 3479371 3479455 GCAGCTAAATGTTGTTTCACC 58 NA Drosophila melanogaster 61 CG1603 FBgn0033185 FBtr0088979 2 1 1 98 2R 3403397 3403480 ATAGCAAGGATATCCAGTACGAG 59 3403321 3403339 GAAGTTCCAAAGAGCTGCC 59 NA Drosophila melanogaster 61 p47 FBgn0033179 FBtr0088997 3 1 1 148 2R 3352767 3352846 TTCATACAAACTGCACGCC 59 3352637 3352656 GTTAGTTACTTGAGGCGCTG 59 NA InUTR Drosophila melanogaster 61 Tsp42Ed FBgn0029507 FBtr0086181 2 1 1 82 2R 2897545 2897620 GACTGCTGTTGAGCTTGTG 59 2897481 2897499 AGTAGTTCTGGCGTCTCTG 58 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0301713 1 1 3 80 2R 2880551 2880632 GCTCCAAGTGGTAAATTATCCA 58 2880670 2880691 TCCAGGAAGTTACATAAGTCCT 58 NA InUTR Drosophila melanogaster 61 CG8343 FBgn0040502 FBtr0085988 1 1 1 60 2R 2067467 2067486 GCTCGTAAGCATTACATCCG 59 2067507 2067527 GTAGTTGAAGAGGAAGTTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12551 FBgn0033045 FBtr0086048 1 1 1 80 2R 1808547 1808565 CCTATGTGACGACCTCGTC 59 1808609 1808627 ACTCATAGACGAATGCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 2 2 5 113 2R 1492008 1492095 AAGTTTGAGTACGCATTCTGTC 59 1491860 1491879 ATAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 3 3 3 80 2R 1195092 1195110 ATCCGAATTCAACAGGCAG 58 1195154 1203788 CCAACTCGAGTAAACCGAC 58 NA Drosophila melanogaster 61 His-Psi:CR33805 FBgn0053805 FBtr0091809 1 1 1 60 2L 21429075 21429097 CTAGAATTATTCCGCGTCATCTG 59 21429116 21429135 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508,FBtr0081511,FBtr0081509,FBtr0081510 2 4 4 92 2L 21297474 21297492 AAGAACCTTCGACAGAAGC 57 21297545 21297620 CGTGAAGATTGCAGTAAATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470,FBtr0081471 1 2 2 81 2L 21159139 21159157 GACAAATGGTGACGGTGTC 59 21159276 21159294 TACTGATGCAGTCGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 RPA2 FBgn0032906 FBtr0081438 3 1 1 88 2L 20925323 20925341 GAGCAATGTTTCCGAGGAG 58 20925164 20925273 CCAGAATGTTGGTCAACTCAG 59 NA Drosophila melanogaster 61 Phlpp FBgn0032749 FBtr0081149 3 1 1 88 2L 19061892 19061973 TGTTAGAGCTCATTCTCAGCA 59 19062023 19062041 GGCTGCACGATCAATATCC 58 NA Drosophila melanogaster 61 CG10376 FBgn0032702 FBtr0081128 3 1 1 60 2L 18702668 18702688 CAGTTCCGGATTAAGCTACTC 58 18702628 18702646 CAAAGCACAGATCCTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 1 2 2 80 2L 18679096 18679115 CACGATAAGCGAGGTTAAGG 58 18679153 18682279 GGGTTCTTAACATTACTATCCTCC 58 NA Drosophila melanogaster 61 CG10178 FBgn0032684 FBtr0081068 1 1 1 80 2L 18512371 18512453 AGGGATCAATTGAAGGACCTC 59 18512493 18512513 TACGGTGAGCATTAATCAGGA 59 NA Drosophila melanogaster 61 CG5783 FBgn0032670 FBtr0081049 2 1 1 80 2L 18156554 18156629 CAAGCTGAAAGTCGAACCTC 59 18156671 18156690 CACTCTGCGTTAACCAATGG 60 NA Drosophila melanogaster 61 CG17681 FBgn0032668 FBtr0081038 1 1 1 96 2L 18154005 18154023 TGAAGCTCATCCAGATGCT 58 18154083 18154154 CTTTGCAGTCTCAAGCACC 59 NA Drosophila melanogaster 61 CG6639 FBgn0032638 FBtr0081004 2 1 1 84 2L 17455645 17455737 GTTCTACGAAAGCCTGGAG 58 17455579 17455600 GTGCATTTATTCCGTTTACTCC 58 NA Drosophila melanogaster 61 CG5050 FBgn0032637 FBtr0080981 3 1 1 88 2L 17453647 17453665 TCTCTTGTCAACTCGGTCC 59 17453717 17453894 AGCTCATTGTACTCCTGCA 58 NA Drosophila melanogaster 61 CG13278 FBgn0032602 FBtr0080933 2 1 1 80 2L 16758783 16758804 AAAGGCCTTTAATCAACCAGAG 59 16758667 16758746 CGCTCTTCAATCATCGATATCAG 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 1 4 4 88 2L 16696754 16697511 TATGTTTAGGTGCAAGGGCA 59 16697562 16697580 ATGCCTTCTGTAGCACCTC 59 NA Drosophila melanogaster 61 CG13244 FBgn0032577 FBtr0080792 3 1 1 100 2L 15916999 15917126 AGTTTGCACGAGTTCTTGG 59 15917189 15917208 ATAGTGACAGTGCAGTAGGC 60 NA Drosophila melanogaster 61 l(2)35Df FBgn0001986 FBtr0080760 1 1 1 71 2L 15753407 15753425 AAGGAGGACAACTTCACCA 58 15753513 15753531 TTTCTGATCTCCCTTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3975 FBgn0027559 FBtr0080713 2 1 1 60 2L 15256129 15256148 AGGCCTACATCAAAGAGCAG 59 15256088 15256110 CCATGGACTAGAAATCTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(H) FBgn0004837 FBtr0080700 2 1 1 93 2L 15042230 15042313 GAATGGCTTTGGGTACGTC 58 15042369 15042388 TATACGTGAAGGTCAGACCG 59 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 2 2 2 81 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164180 14164201 TTCTCCAGTGTATCAGAATCCA 58 NA Drosophila melanogaster 61 CG15293 FBgn0028526 FBtr0080603 1 1 1 182 2L 14109137 14109209 CTTCTGAAGCTGAAGGGAG 57 14108973 14108993 CTCATAGGTCAAAGTGGTGAC 58 NA Drosophila melanogaster 61 CG7916 FBgn0028534 FBtr0080549 3 1 1 104 2L 13847072 13847091 CTACACCAATGCTGATCTCC 58 13847213 13847231 TTGATCTCCATGCCTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CAH1 FBgn0027844 FBtr0080539 1 1 1 186 2L 13803944 13803962 GGATACACCGAAGAGAACG 57 13808958 13809043 AGCAATAGCCAGGATTGAC 57 NA Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 2 2 2 84 2L 13794621 13794909 CATATCAGCTGCCTACAATGAG 59 13794950 13794972 GGAGTAGTCGTTTCCATTAAGTG 59 NA Drosophila melanogaster 61 CG16815 FBgn0032491 FBtr0273448 2 1 1 60 2L 13230002 13230020 GAACAGCCGATCTTCAAGC 59 13230043 13230062 CATTATCCAACCAAGGTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31849 FBgn0051849 FBtr0080490 3 1 1 60 2L 13181645 13181663 TATACGCTACTACGCTGCT 58 13181603 13181622 AGTGACTGTAGGCCATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 1 1 1 112 2L 13071858 13073281 GTTCGTATGTGTAATGGTTGG 57 13071766 13071786 GGACGAAGATAATGATACCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5780 FBgn0032446 FBtr0300273 2 1 1 99 2L 12694370 12694389 ATACCAACGGATGACATTCC 57 12694235 12694308 GTGAGGTGCCAATAGTTGG 58 NA Drosophila melanogaster 61 Elf FBgn0020443 FBtr0080369 3 1 1 81 2L 12439158 12439178 CAAATCAATTATCTGTGCGGG 58 12439221 12439304 GATGAGGGCCTTAACTGTG 57 NA Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 3 1 1 169 2L 12356592 12356663 CATATGTCCCGGAATTGCC 58 12356796 12356814 GTTTAGGTAGTCATCGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343 1 1 2 109 2L 12173030 12173049 TGAATCCAATTGAAACGCGA 58 12173121 12173222 TTTGATCGCCCAATTGCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 1 2 2 93 2L 11369001 11369736 ATTTATGGGTCTGCATCCG 57 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 CG14926 FBgn0032360 FBtr0080251 1 1 1 80 2L 11343037 11343111 AACTACTCACAGATGGGAAGG 59 11342977 11342995 GGTGTTCGCTTGACTTGAG 59 NA Drosophila melanogaster 61 Dpy-30L1 FBgn0032293 FBtr0080112 1 1 1 63 2L 10733158 10733176 TAAAGCATAGCAACGGGTG 58 10733203 10733221 TAGGAGTTGTTGTCCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34160 FBgn0250826 FBtr0112351 3 1 1 110 2L 10579913 10580006 CAACAAGGCATCCTCTTCC 58 10580076 10580098 CGGCACAATAATCGTCTATAGAG 59 NA Drosophila melanogaster 61 CG7456 FBgn0032258 FBtr0080038 2 1 1 80 2L 10487182 10487251 GCCTACAGGTACATGTGGA 58 10487120 10487141 TCTTCATGATCTTCTCATAGCG 57 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 2 2 2 87 2L 10365120 10365138 GGTCTATCCCGAAGAACCT 58 10365188 10365281 GGCTTCAACGACATTTACTC 57 NA Drosophila melanogaster 61 CG5367 FBgn0032228 FBtr0080055 1 1 1 81 2L 10355858 10355956 GCTGATATGAGCACAGATGG 58 10355796 10355814 CCATATTATCCGCGCTGTC 58 NA Drosophila melanogaster 61 RnrL FBgn0011703 FBtr0080059 2 1 1 86 2L 10327440 10327694 TTGATCCTGTTACTATCACCCTG 59 10327376 10327394 TTTCTGCTGCCAAGTTGTC 59 NA Drosophila melanogaster 61 CG34043 FBgn0054043 FBtr0300408 1 1 1 89 2L 10280114 10280133 AGAATACAGAGATTGCGGAC 57 10279678 10280063 ATTCCTCCACTATTTCTGCG 57 NA Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 2 2 2 80 2L 10225002 10225021 GCGTATTTCATCTAAGGTGC 57 10224876 10224965 CTCCTAACATAGTATACCTATCACC 57 NA Drosophila melanogaster 61 CG31875 FBgn0051875 FBtr0079973 2 1 1 60 2L 9996322 9996341 CAAGATGACAAGGCTGTTCG 59 9996281 9996302 CCTCGATATCATAGAGACTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12438 FBgn0032065 FBtr0079732 1 1 1 60 2L 8752951 8752970 CTACATCAGCTTCGAGTACC 58 8752993 8753011 ATAGAGCACTATGGCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lmg FBgn0250903 FBtr0112743,FBtr0079695 1 2 2 60 2L 8528094 8528112 GCAACCGTTGAACAAACAG 58 8528052 8528071 TTAATGCACGTTGAACTTCC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13097 FBgn0032051 FBtr0079697 3 1 1 73 2L 8512857 8512875 ACAATCACCAAGAATCGCA 57 8512696 8512715 TTTGAGGACTTCAGAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 D12 FBgn0027490 FBtr0079707 3 1 1 67 2L 8436305 8436325 GCAAAGATCTACCTGAACCAC 59 8436201 8436219 GTATGACGGATGGAGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 D12 FBgn0027490 FBtr0079707 1 1 1 66 2L 8436305 8436325 GCAAAGATCTACCTGAACCAC 59 8436202 8436220 TATGACGGATGGAGGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 grk FBgn0001137 FBtr0079708 3 1 1 81 2L 8431927 8431945 CAGTCTTCCATTCCTGCCT 59 8431729 8431885 TAGATGTAGTCACCATTCCAGC 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664,FBtr0079667 1 2 4 68 2L 8429454 8430290 AACAACAAGGTGGATCTCG 57 8430322 8430340 CTGTGTTGTAACGTCTGCC 59 NA DesignRelaxed Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 2 2 2 80 2L 8367719 8367805 CAGGATGATCAGGACTCTGTC 59 8367847 8367865 TACATCATCCTGAGGCAGC 59 NA Drosophila melanogaster 61 CG7840 FBgn0032014 FBtr0079598 3 1 1 60 2L 8306532 8306552 GGATTTGGCGATTGATCTTCC 59 8306573 8306592 GTTAGCAGAGCATTGATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trf FBgn0010287 FBtr0079542 1 1 1 129 2L 8073006 8073024 GGACAGGGATAATGTGGCT 59 8073112 8073206 CACGATATTCTGCAATCGTATCTC 59 NA Drosophila melanogaster 61 Wwox FBgn0031972 FBtr0079550 3 1 1 100 2L 8003460 8003541 ATTAAGCAGAGTGTTAGCCAC 58 8003380 8003398 TGGAATGTGGTCTCCAGAC 59 NA Drosophila melanogaster 61 CG7211 FBgn0031941 FBtr0079481 2 1 1 202 2L 7747382 7747402 TGAGTCAATTGATTGCCAAGG 59 7747619 7747637 TCCGGACTTCTTTAGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Gas41 FBgn0031873 FBtr0079364 2 1 1 95 2L 6949527 6949604 CCATGACACTGACTTTGAGG 58 6949451 6949472 TCCTTAAGTGTAACAATCTCCC 57 NA Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 2 1 1 70 2L 6558589 6558954 TCTGCGAAGAGGATCAGAC 58 6558988 6559006 GCACTCACAACGTTTCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42369 FBgn0259715 FBtr0299968 3 1 1 60 2L 6396919 6396937 AACGACTACCTGGATCGTC 58 6396877 6396897 TCATCTCTTCGGTGTAGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9486 FBgn0031791 FBtr0079243 1 1 1 60 2L 6256177 6256198 ACAAGATACACAAGTTTCTGGC 59 6256216 6256237 CCGTAGTGCTTGAAGATATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34180 FBgn0085209 FBtr0300048 2 1 1 82 2L 6060607 6060681 GCCAAGGAATATCAGTTCATCC 59 6060724 6060742 CATATGCTTAAGGGACCGC 59 NA Drosophila melanogaster 61 Ucp4C FBgn0031757 FBtr0079172 3 1 1 60 2L 5968717 5968737 GATCCTTGGAAATCGAAGAGG 58 5968759 5968777 GTTAGTGGATCAGCGACGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111,FBtr0079110 1 2 3 60 2L 5668878 5668957 ATCAGTCAACATGATGCGC 59 5668981 5668999 GATCTTTGCAGTACGCTGC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31646 FBgn0051646 FBtr0079114 3 1 1 82 2L 5635705 5635723 CTATCTCTGCATCGCCTCC 59 5634774 5635659 AAATCATGGGCGGAAAGTG 58 NA Drosophila melanogaster 61 CG14020 FBgn0031707 FBtr0079094 3 1 1 60 2L 5518441 5518459 ACGCAACATCAAGACTCAG 58 5518481 5518501 ATTTCCGTTGGTAGAGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 1 4 5 108 2L 5277015 5277033 AGTTATCCGTCACGGACTC 58 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 TpnC25D FBgn0031692 FBtr0079063 1 1 1 133 2L 5218740 5218758 TTACATCACCACCTCAACG 57 5218852 5218935 CCATGAATTCATCAAAGTCCAC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 110 2L 4994864 4994882 CTTGTCGCTCCTAACCCTC 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 Gmd FBgn0031661 FBtr0079049 1 1 1 128 2L 4976855 4976873 GAAGCAACGTCCTGAAAGC 59 4976642 4976763 AAATAGGAGCCATCCTGGC 59 NA Drosophila melanogaster 61 dp FBgn0053196 FBtr0290006 3 1 1 80 2L 4506204 4506222 CCTGTCCACCAGGATACTC 58 4506082 4506160 CAAGCTTAACGGGTGTTGG 59 NA Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0110812 3 1 2 102 2L 4456454 4456472 AGAGTGAGGAGAACTGCTG 58 4456060 4456389 TATATCCTCTCCGTGTCCAG 57 NA InUTR Drosophila melanogaster 61 CG3652 FBgn0031600 FBtr0077460 2 1 1 94 2L 4393423 4393510 TACGAGATTGGGACCTTTGG 59 4393348 4393366 GTTGTCAGACATGCTGTCG 59 NA Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 1 2 2 73 2L 3545743 3545761 ATCACCTATTCGTGCGAGG 59 3545798 3546739 TGACTACATCTGTGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 3 10 10 81 2L 3502697 3502715 CGATTATGTCGCCAATGGA 58 3502546 3502652 TTCATGTTGATGAGGCTGC 58 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638,FBtr0112641,FBtr0112639 3 3 3 80 2L 3363352 3363370 GTGTTAATGCAGGCATTCC 57 3363179 3363309 TGTGATCATCGACAGTTCTG 57 NA Drosophila melanogaster 61 alpha4GT1 FBgn0031491 FBtr0077670 2 1 1 81 2L 3022959 3023044 ATGTGGCGTACATAGAATCTC 57 3022898 3022917 CGAGGATGATGAACATCCTG 58 NA InUTR Drosophila melanogaster 61 CG3597 FBgn0031417 FBtr0077792 1 1 1 80 2L 2370654 2370677 CTAGTAACCGGACTAGAGAATCTG 59 2370506 2370620 CCAGTAATTGGACAGCTTAATCTC 59 NA Drosophila melanogaster 61 CG17237 FBgn0031410 FBtr0077801 3 1 1 60 2L 2288776 2288795 ATACGGATAAGTCCGGTTGG 59 2288735 2288753 CCGGTCTTGGTTAGAATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15356 FBgn0031377 FBtr0077869 2 1 1 110 2L 1976800 1976917 CAATAGCATAATTGAGCTGCAC 58 1976711 1976729 GTCTCTGGCGATATGTTGC 58 NA Drosophila melanogaster 61 frtz FBgn0086698 FBtr0077911 1 1 1 88 2L 1712078 1712153 GTGGTGCCAGAAATTCCTC 58 1712008 1712026 GGATTTGTCAGATGTCGCG 59 NA Drosophila melanogaster 61 robo3 FBgn0041097 FBtr0077921 1 1 1 92 2L 1287040 1287169 TTGGAAGATGTTCCGGAGG 59 1287225 1287243 TGGTTGTGGAGGTAACCAC 59 NA Drosophila melanogaster 61 CR32660 FBgn0052660 FBtr0073592 3 1 1 81 X 11814605 11814697 AAAGTAGGGATGATGACAACTG 58 11814545 11814564 GGGTACATGGATTTGACAGC 59 NA Drosophila melanogaster 61 tsg FBgn0003865 FBtr0073582 3 1 1 60 X 11882344 11882367 CCTCAATTATGGAATCAACGAGAG 59 11882307 11882325 CAGTTGGTCCTGATCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32006 FBgn0052006 FBtr0089170 1 1 1 85 4 173540 173620 CCAACACTCCCATTTCTGC 59 173669 173687 TGAATTTGAAGCCAGCACG 59 NA Drosophila melanogaster 61 snoRNA:Or-CD8 FBgn0086061 FBtr0114337 3 1 1 61 3R 25688374 25688392 CTGCAATTGTGCTCTCGAG 59 25688414 25688435 TCAGTAGTCCGAACATAAAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33328 FBgn0053328 FBtr0082858 1 1 1 60 3R 9464689 9464709 ACCAGTAGAGCCACTATATCC 58 9464649 9464669 CTGATTGATTGCTTTGTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7903 FBgn0039730 FBtr0085608 1 1 1 80 3R 25820790 25820879 TGAATACTACCGCCAAGGT 58 25820728 25820747 CATAGTTGGTGAACAGTCGA 57 NA Drosophila melanogaster 61 CG7598 FBgn0039689 FBtr0085473 1 1 1 83 3R 25563168 25563186 AACTCGGATCACACCAAGG 59 25563230 25563309 CTTAAAGGATTTCCGCACTCTC 59 NA Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 2 2 2 84 3R 25058454 25058472 TGATATTTCTGTGCCGGTG 57 25058518 25058593 GCAGGAATTCTGTATGTAGGT 57 NA Drosophila melanogaster 61 CG31415 FBgn0051415 FBtr0082127 2 1 1 81 3R 5569294 5569312 CAATACTCCAACCAGCAGC 58 5569357 5569801 ACATGTTGAGCCTTCAACG 58 NA InUTR Drosophila melanogaster 61 Obp85a FBgn0037589 FBtr0081849 2 1 1 132 3R 4246076 4246294 CCATGTTCCTAACACGTCC 58 4245905 4245923 AAGTTGCACTCCTCAATGC 58 NA Drosophila melanogaster 61 sowi FBgn0037460 FBtr0081701 2 1 1 80 3R 2452859 2452967 TGAACTTAAGGCGGATATGAC 58 2452799 2452820 TAGTCCTCGTAGGAAATGACTC 58 NA Drosophila melanogaster 61 CG7011 FBgn0036489 FBtr0075645 3 1 1 167 3L 15155930 15156097 AATGCTACTCACTGCTGCA 59 15155781 15155799 ATTCACTTCCAGGTGACCC 59 NA Drosophila melanogaster 61 CG17153 FBgn0036248 FBtr0075992 2 1 1 87 3L 12111649 12111667 AAGTGCCATGTGGACTACC 59 12111715 12111797 CCAACGAATCGTCTAGTTTAGG 59 NA Drosophila melanogaster 61 CG32061 FBgn0052061 FBtr0076285 1 1 1 60 3L 10457111 10457129 CTATCCCTCCGTGAATCGT 58 10457147 10457171 CATCCAGTGATTGTATTTATAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6462 FBgn0035663 FBtr0077039 1 1 1 60 3L 6030647 6030665 AGGAGTTACAAGTCACGCA 59 6030686 6030707 CCTCCAAATCCCAAGTAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0110858,FBtr0089864,FBtr0110856 1 4 4 90 3L 2137390 2137408 GATCAACAACCAGAGCGTC 58 2136049 2137336 CTCGAGCAGCTCTATGGTC 59 NA Drosophila melanogaster 61 CG42497 FBgn0260223 FBtr0300626 1 1 1 60 2R 17578503 17578592 GAATCGCTGTCTGTTGGAC 58 17578461 17578479 TTTGACAGCACAAATGCGT 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087903,FBtr0087902,FBtr0301874 1 3 3 60 2R 8226254 8226273 GAAGTACAAGACCAATGCGG 59 8226293 8226314 CTTCATACACTGCGTAATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 1 2 3 62 2L 19581865 19582014 CCAAACAATCGACATGGAGG 59 19581822 19581840 GAAAGCGTGGTGAAAGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13134 FBgn0032182 FBtr0079968 2 1 1 61 2L 10097798 10097816 TCACTTCGACGAGAATCCT 58 10097026 10097044 CTGATTGCGGCTGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083,FBtr0078084 2 2 2 60 2L 477917 477937 GTCTCTTCTAGTAGCCAAGAC 57 477877 477896 AAGAGGAACTACAGCAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scp2 FBgn0020907 FBtr0083361 1 1 1 95 3R 12401112 12402658 ACAACGATGGACAGGTCAG 59 12401035 12401053 TGTAGGCATTCTGCCAGTC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578,FBtr0100581,FBtr0100580,FBtr0100577,FBtr0100579,FBtr0100582,FBtr0089442,FBtr0089441 2 8 8 80 X 167417 167514 GACAAACAGAAGATCAGCTGG 59 167357 167375 CAGATCCTCCCTTCCATGG 59 NA Drosophila melanogaster 61 CG40813 FBgn0085521 FBtr0113934 2 1 1 63 U 3136523 3136541 GAAATCTTGGGCGAGTACG 58 3136567 3136659 GATGCTTACTTGACTGCGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2053 FBgn0039887 FBtr0085873 1 1 1 83 3R 27865003 27865021 GAGAGCGCTTCTCTAGAGC 59 27865067 27865136 CATGGCATCATCACAAACCT 59 NA Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073299 1 1 2 114 3L 4435077 4435180 TCTGTACATTCAGACCCGC 59 4435258 4435276 ATCCATCAGAATGCCCACC 59 NA Drosophila melanogaster 61 CG18635 FBgn0034279 FBtr0089557 2 1 1 80 2R 13656736 13656804 CAATTACGAGACCTCTGCT 57 13656674 13656693 TGATAACTGGTGGTTATGGC 57 NA Drosophila melanogaster 61 CG42358 FBgn0259704 FBtr0299957 2 1 1 154 3R 14986379 14986460 CCTTGAACCTAACACCCGA 59 14986243 14986264 GATCTTAATTTGCAAACCCTGC 58 NA Drosophila melanogaster 61 CG10102 FBgn0033927 FBtr0087559 1 1 1 128 2R 10249281 10249450 GTTAGACGAGCACAGTTTGTG 59 10249173 10249195 TGGAAGAAGTCCATGTAGATCTG 59 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 1 4 4 122 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877015 9877037 CCACTGATTTAGCATCTTCATCC 59 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 1 1 1 85 2L 10704074 10704150 CATAATGAAGACAGCTGTGGA 58 10704197 10704215 CTAGAGATTGATCGGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718,FBtr0077719 1 2 2 113 2L 2770393 2770472 ATGATAAATGCGTTGCCTTCC 59 2770547 2770565 GATCGGCATCTCCATCCTC 59 NA Nonspecific Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175,FBtr0290032,FBtr0087173,FBtr0290031,FBtr0087176 3 5 5 81 2R 12214366 12214384 TTTGGTCAAGAAGGAGCAC 58 12214241 12214321 ATTAGCCATGACCTTGGGT 58 NA Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111190,FBtr0111189 3 2 2 60 X 22363897 22363918 CATTCTTATCAATAACGCCGGA 59 22363858 22363877 GTCTACCGACATAGTCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17601 FBgn0031197 FBtr0077361 2 1 1 60 X 21949333 21949352 TAAACCACCTGAAGTCTGTG 57 21949375 21949393 TTACGATCCCACTGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 CG15460 FBgn0031104 FBtr0302241 3 1 1 82 X 20261515 20261533 CTAACAGAAGTCCTTCGCG 58 20261395 20261469 CTTTACGTCCAGCATGAGC 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 2 4 4 80 X 19237156 19237177 CTAACACTCATGCAGATTATCG 57 19236862 19236943 GTTCCATTCCAATTTGAGCC 57 NA Drosophila melanogaster 61 CG32547 FBgn0052547 FBtr0290002 1 1 1 89 X 18340185 18340203 TACCTGATGTTCGTGTGGG 59 18340005 18340132 CTCCTGTTCATCTCTGGGC 59 NA Drosophila melanogaster 61 Tsf1 FBgn0022355 FBtr0074559 1 1 1 80 X 18284138 18284221 GTGTATTTCAACGACAAAGCC 58 18284261 18284281 GAGATCTGTGTAGATCTGCTC 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112878,FBtr0074554 3 4 9 121 X 18269410 18269884 TACAACACCAACAACAGCG 59 18269969 18269987 AGGCACTTGATGTACTCCT 58 NA Nonspecific Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 3 2 2 80 X 16545984 16546007 CTATGTACTATTCCACTCGTTGTG 59 16546045 16546126 TCGCCGTATGGTAATTTGAC 58 NA Nonspecific Drosophila melanogaster 61 CG33177 FBgn0053177 FBtr0073962 2 1 1 85 X 14975768 14975786 GATTTACGCCTGAGTCGGA 59 14975976 14975994 TCTAGGTCGTTGCGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12398 FBgn0030596 FBtr0073976 3 1 1 163 X 14807144 14807218 AGATATAGATTTCCTTCGCCAC 57 14807002 14807022 TATCCTTTGTTGGCACTACAG 58 NA Drosophila melanogaster 61 nmdyn-D6 FBgn0030573 FBtr0073933 1 1 1 114 X 14477976 14478070 TTATGAACAGCGGACCCAG 59 14478148 14478166 TTGGGATCACTGTACACGG 59 NA Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073696,FBtr0073695 1 2 2 242 X 12796457 12796475 GGTTCAGTACGAGGGTACG 59 12795769 12795787 TCGTACAGGCTGCAATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9806 FBgn0030222 FBtr0071506 3 1 1 81 X 10520263 10520282 TCTTTGGAAAGCCGTATCCT 59 10520145 10520220 CCTAAATGCTCGTGACTCTG 58 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 3 1 1 190 X 1562776 1562857 CTACAAGATGACAAGCGGC 59 1562604 1562622 CAGTGTTAAGCACAGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG40992 FBgn0085550 FBtr0302343 3 1 1 60 U 5052226 5052246 TAACGGAGTTTGTTACATCCC 58 5052186 5052206 CGAGATAATGTCAAGCAATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114112,FBtr0114111 1 3 4 83 U 1352855 1362606 GCAACAAACGATATGCTCAG 58 1362649 1362670 CCTCATATCCGTCTATTTCCAG 58 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 3 3 3 80 4 939580 939599 ATACTTGGCATGTGCAAACC 59 939393 939539 AAAGTTTAGACAGGCCTTCCA 59 NA Drosophila melanogaster 61 CG2219 FBgn0039889 FBtr0089153 1 1 1 91 4 199495 199570 TATACACGTTGCACTGATGG 58 199423 199441 GCGGTACGCATTAATTCCA 58 NA Drosophila melanogaster 61 ci FBgn0004859 FBtr0089178 3 1 1 81 4 71987 72010 CACATATCCAGATAACAACATCCC 59 71873 71950 AAGTTCTTCAACGAGAATGCTG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-3091a FBgn0082979 FBtr0113579 1 1 1 70 3R 1422493 1422513 TCTGGTACGTAATTGCAAGAG 58 1422443 1422461 ACGTTGTTCAGTGAATGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13978 FBgn0039518 FBtr0085182 3 1 1 251 3R 23290749 23290819 GAATAATGAAGGAGCACATGG 57 23291032 23291050 ACCGCTTGATACTCATCAC 57 NA DesignRelaxed Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0113296,FBtr0085147 2 3 3 80 3R 22889052 22889073 ACATTAACCATGGCTTCTTTGG 59 22887272 22889011 TGAGGTTACCTGGTGTCTG 58 NA Drosophila melanogaster 61 ms(3)K81 FBgn0002838 FBtr0085063 3 1 1 62 3R 22702051 22702069 AGTCCAATTCTTCCGACGA 58 22702095 22702113 AACTCAGATTCGAGCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hex-t2 FBgn0042710 FBtr0085011 1 1 1 80 3R 22276942 22276960 GGACTCTCCAAGGGTATCC 58 22277003 22277110 AAGACTCACCACATTCTTGC 58 NA Drosophila melanogaster 61 Apc2 FBgn0026598 FBtr0084552 3 1 1 84 3R 19990521 19990602 AACTGCTACAGGTTCTTGC 58 19990648 19990668 CCCAGCTCGTTAAAGATAGTC 58 NA Drosophila melanogaster 61 lbl FBgn0008651 FBtr0300061 2 1 2 81 3R 17259036 17259054 ATCAAGTGGAGACACTCCC 58 17252812 17258993 CTTTGATGTACTGACCTGCTC 58 NA Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 1 2 2 100 3R 17101292 17101368 AGATCACGAGCATCAGTCC 59 17101210 17101228 TATATCCTCCGATCGCAGC 58 NA Drosophila melanogaster 61 CG7044 FBgn0038854 FBtr0084035 1 1 1 82 3R 16926852 16926936 GAGCTTGATATAGTAAACAGAGCAG 59 16926794 16926815 CGTATGCCACCTAACTTAATCG 59 NA Drosophila melanogaster 61 CG3822 FBgn0038837 FBtr0083987 1 1 1 80 3R 16687386 16687463 CTTTCTTTAGGGACTCAAAGATCTC 59 16687330 16687349 CTGTAAAGACGGAAGGACGA 59 NA Drosophila melanogaster 61 mun FBgn0261342 FBtr0302264 3 1 1 102 3R 16213335 16215692 CGAGTGCAGATTAAAGTTGGA 58 16213253 16213271 AATCATGGCTGTTCGACAC 58 NA Drosophila melanogaster 61 pxt FBgn0038538 FBtr0083508 2 1 1 85 3R 13547546 13547625 GCCATTCCAGTGTTGATGG 59 13547668 13547692 GAACATCACATCTGGTATATTGACC 59 NA Drosophila melanogaster 61 Mur89F FBgn0038492 FBtr0083413 2 1 1 123 3R 12979699 12979717 CTACCAAGACAAGTCCTGC 57 12979518 12979614 GCTGATTTGAACCACATTCTG 58 NA Drosophila melanogaster 61 Rpb7 FBgn0051155 FBtr0083137 2 1 1 87 3R 11048734 11048810 TTTACCACATATCGCTGGAG 57 11048666 11048684 TAGAGTTTCTGCTTCACGG 57 NA Drosophila melanogaster 61 CG9925 FBgn0038191 FBtr0082876 2 1 1 81 3R 9787986 9788005 CTAGTGATGTTTCCGTTGGC 59 9787859 9787944 TCCTTACTCAATATCTCGCCC 59 NA Drosophila melanogaster 61 CG31517 FBgn0047199 FBtr0082864 1 1 1 121 3R 9774629 9774648 ACATTGTCAAATGCCATCAG 57 9774816 9774834 ATTTAACGTTGTCCTGCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5538 FBgn0038052 FBtr0082631 3 1 1 90 3R 8273751 8273769 ATCCTGGTAGACCACATCG 58 8273889 8273907 ATCTTGCTGACCGATTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG5538 FBgn0038052 FBtr0082631 1 1 1 89 3R 8273751 8273769 ATCCTGGTAGACCACATCG 58 8273888 8273906 TCTTGCTGACCGATTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 GstD3 FBgn0010039 FBtr0082570 3 1 1 60 3R 8199060 8199078 ATATTCAGAAGCAGGCGGT 59 8199101 8199120 GGATACATCAACGCCATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spt3 FBgn0037981 FBtr0082537 3 1 1 60 3R 7843624 7843642 GATTATTCCGCGCAGATCG 59 7843665 7843684 TTGAACTCCAGGTATTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fau FBgn0020439 FBtr0082309 1 1 4 89 3R 6598880 6602913 TCCTACGCAGTTACGTACC 58 6598809 6598829 GATGATGACAAGCGATGTAGG 59 NA Drosophila melanogaster 61 CG3940 FBgn0037788 FBtr0082179 2 1 1 80 3R 5938521 5943336 CCCTCTCCTTAATAGTCTGCT 58 5943378 5943396 CCTGGTTGTTGTCCAAGTC 58 NA Drosophila melanogaster 61 CG12951 FBgn0037677 FBtr0082058 1 1 1 92 3R 5155981 5155999 GTAACTACGGTTGGTCAGG 57 5155717 5155925 TAGGGATACCACGAAAGGA 57 NA Drosophila melanogaster 61 CG11986 FBgn0037656 FBtr0081967 3 1 1 86 3R 4841234 4841303 ACCTGTCTAACTCTAGACCCT 59 4841351 4841369 CTCTTTGAAATCCGGCTCC 58 NA Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081589 1 1 2 159 3R 3187290 3187412 CTATAATAATGAGCACCGCCA 58 3187151 3187171 CTAGTGCAAGTGTAGCAACTC 59 NA Drosophila melanogaster 61 Osi15 FBgn0037424 FBtr0078607 1 1 1 85 3R 2128615 2128633 TTCATCTCGCTGAAGGCTC 59 2128740 2128758 TTCTTGGCCAACAGATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 2 5 5 86 3R 1684299 1684375 TCTTCTTCCAAGCCAAGGT 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0078785 3 1 2 158 3R 1181842 1182158 AACGAAGATGATGAACCAACG 59 1182278 1182296 TAGCATGGTATGCCTGTCG 59 NA Drosophila melanogaster 61 CG1115 FBgn0037299 FBtr0078777 2 1 1 70 3R 1052691 1053054 TCTGCAGCAGAATCCTCTC 59 1053085 1053106 GCAATTAACCCACTGTAATCAG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG1126 FBgn0037280 FBtr0078872 3 1 1 84 3R 642077 642095 ATCGAAGGAAACCAACAGC 58 642143 642219 GGTTCTTGTGCAGTTGAGG 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 2 2 2 80 3R 231257 231329 GACGTACAACTAAGTCTGAGG 57 231371 231389 CAGCCTCTGGTAACTTACG 57 NA Drosophila melanogaster 61 CG14448 FBgn0037191 FBtr0078534 3 1 1 60 3L 22781937 22781955 CTACCACCAATACCCTGGA 58 22781979 22781997 CCACTCGCGTGTATAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7177 FBgn0037098 FBtr0078381 2 1 1 80 3L 21539391 21539668 CACAGACACAAGAGATAACCA 57 21539331 21539349 CTGCAGTGGGAGTATTCTG 57 NA Drosophila melanogaster 61 CG10565 FBgn0037051 FBtr0078323 2 1 1 90 3L 21127997 21128473 GAGATACTGGGCACATCCA 58 21127925 21127945 TATCGATGTCGTTCTGTGAGG 59 NA Drosophila melanogaster 61 CG5955 FBgn0036997 FBtr0078197 1 1 1 81 3L 20461490 20461508 TGGACTGGACTTCAGATGC 59 20461553 20462076 CACAGCGTAATCTGTGGTG 58 NA Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 1 1 1 77 3L 19910138 19910156 CTGCTCCGATCACTACGAG 59 19910196 19910284 TCCTTATCCTTGCCCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074943 2 1 3 236 3L 19594871 19594889 AGATGCATGCCAGATTTGC 59 19595153 19595172 GCGTATACTTACTCGGTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Shal FBgn0005564 FBtr0074973 2 1 2 83 3L 19565173 19565403 GGAGAAGACAACGATGTAGC 58 19565109 19565128 GCTTTCCTAATGAGCTCGTG 59 NA InUTR Drosophila melanogaster 61 CG14095 FBgn0036870 FBtr0074987 1 1 1 193 3L 19457700 19457789 TGTTCAAATACGCCGTTGTC 59 19457526 19457544 AACTTGGGCAATCACTGGA 59 NA Nonspecific Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075042 2 1 4 110 3L 18988585 18988603 AAGAAGCAGAATGTCGGTG 58 18985788 18985806 CCATAGGTGATGGAGGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 gk FBgn0020300 FBtr0075126 2 1 1 97 3L 18133108 18136608 GACATAACTGAAGAGCACGA 57 18136668 18136686 TTGGTCTTCAGACTAGCCC 58 NA Drosophila melanogaster 61 CG13071 FBgn0036585 FBtr0075461 2 1 1 81 3L 16254917 16255662 AATCGGATGGTCTGATGCA 59 16255707 16255725 GAATGCTCAGGTTTCCCTG 58 NA Drosophila melanogaster 61 CG33689 FBgn0053689 FBtr0091669 2 1 1 130 3L 16193689 16193709 ATTGACTACACCTTCGATGGA 59 16193801 16193872 ACAATGATGTCGTGGTCGT 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075450,FBtr0075449,FBtr0075451,FBtr0075448,FBtr0114589 2 6 6 126 3L 16111387 16111405 ACACCACGATATCGAAGCA 59 16111495 16111620 ATTTGCACAATGTTCGCCT 59 NA Drosophila melanogaster 61 CG12713 FBgn0036536 FBtr0075506 1 1 1 156 3L 15825879 15825965 TCTCAAAGCCTACGAGGAG 58 15826085 15826103 AAGAAGCTGTGAGATGTGC 58 NA Drosophila melanogaster 61 CG34244 FBgn0085273 FBtr0112438 2 1 1 104 3L 14228641 14228719 CCTTCTGGCTTACATCGCT 59 14228555 14228573 GTCACATCCGCATAAACCC 59 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075763 1 1 3 163 3L 13968924 13968942 CCGCCCGTATATGTTAGCT 59 13969137 13969155 TAGAAGCTCTTCCGTTCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 1 2 2 80 3L 13437169 13437316 AGTAGGAAAGTTGTAGAGACGA 58 13437356 13437375 CGAATTGACTACGCCTTCAC 59 NA Drosophila melanogaster 61 CG4069 FBgn0036301 FBtr0075965 1 1 1 107 3L 12530132 12530217 CTGGGAGAAGCAAATATAGCTG 59 12530046 12530064 ATTGGATCGTGGAGTTGGT 59 NA Drosophila melanogaster 61 Pcaf FBgn0020388 FBtr0075969 1 1 1 80 3L 12515083 12515103 ACGATAGTGCTACTCTCATGC 59 12514961 12515042 TCTGACTGCGAATTACAGCT 59 NA Drosophila melanogaster 61 CG10426 FBgn0036273 FBtr0076007 1 1 1 83 3L 12273951 12274030 CAGGAACCGATGCAATTCC 59 12274077 12274095 GGTTATTCAAGCGTCGACG 59 NA Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0302135 3 1 2 171 3L 11816657 11816767 GAGAGCCTTGTTGAAGCAC 59 11816902 11816920 ATCATAGGACTTGGCCAGC 59 NA InUTR Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 3 1 2 60 3L 11246059 11246819 AGATTGGACCAGCAGACTG 59 11246843 11246861 CTTCTTGGACATCAGGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 pall FBgn0036005 FBtr0076471 2 1 1 84 3L 9480578 9480596 GATCATTATGGCCCATGCC 58 9480443 9480530 TAGAATGTGGTTCCTGCGT 59 NA Drosophila melanogaster 61 CG4447 FBgn0035980 FBtr0076444 1 1 1 60 3L 9357984 9358004 GAGTGGCATGAACCTTAATCC 59 9358024 9358044 CTTTGGGATGGGTATGAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Klp67A FBgn0004379 FBtr0076499 1 1 1 92 3L 9359647 9359668 CGACAGGGTATTCGATATAGAC 57 9359509 9359597 CAGTTGTATCCATTTAACACCG 57 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076525,FBtr0076528 2 4 5 98 3L 9083426 9083445 CAAGGAATGCATACCACCAG 59 9083506 9083581 TATTGAACGGGAGCCTGAC 59 NA Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 2 2 2 80 3L 8301052 8301199 TGCAAGTGACTCAACTTTACG 59 8300992 8301012 ACTTCTCCACAATGTTCTGTG 58 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 2 2 2 73 3L 8115215 8115288 AATACTACAGTGGCGAGCT 58 8115325 8115343 GTAATTGGAGGCCTCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076946 3 1 2 96 3L 6906622 6906871 TATATGTTGGGCTAGCTGGAC 59 6906546 6906564 AACTGGTCACTATTCCCGC 59 NA InUTR Drosophila melanogaster 61 Cpr65Ax1 FBgn0086900 FBtr0112465 2 1 1 87 3L 6140849 6140937 TCATATGCAGTTGAAACCAGC 59 6140782 6140800 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13295 FBgn0035674 FBtr0077065 1 1 1 94 3L 6068061 6068140 GAACCAAGATCTGACAACGG 59 6067986 6068004 TCTCGTTGGTGTTCCTCTG 59 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077075 2 1 3 137 3L 5925732 5925750 GAAGCGACCCTGAAATTGG 59 5925553 5925631 TAGATGGTGTTGCTGGGTC 59 NA InUTR Drosophila melanogaster 61 Txl FBgn0035631 FBtr0077098 1 1 1 80 3L 5759806 5759883 CAGGATCTAAGCCTGGCTC 59 5759925 5759945 TTGCACATTCTGGAACTTGAC 59 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 3 3 3 80 3L 5753885 5753963 AGAAATCACTTTGGACCAGGA 59 5754002 5754023 TAGCTCAGTTTGTCTATTGGGA 59 NA Drosophila melanogaster 61 Klp64D FBgn0004380 FBtr0077157 3 1 1 60 3L 5351424 5351444 ATCGGAACTCCAAGTTAACTC 57 5351384 5351402 ACGGTCTTGGAGTTACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073300,FBtr0073299 3 2 2 207 3L 4429402 4429420 TCAAGACGGAAAGTTCGGA 59 4429654 4429672 GGATTTGCAGGAAGACTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11582 FBgn0035525 FBtr0300579 1 1 1 60 3L 4283170 4283189 GCTACAGGTGGTTTCATGAC 59 4283129 4283150 CCGTAATTCATGCAAAGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14984 FBgn0035480 FBtr0290224 3 1 1 106 3L 3951475 3951759 AATCGAAGAGTCTCGTCACC 59 3951388 3951407 TATATCCGATACCGTGGAGC 58 NA Drosophila melanogaster 61 Sc2 FBgn0035471 FBtr0073159 1 1 1 206 3L 3904204 3904222 CTATGTGTCCTACCACGTG 57 3904612 3904692 GAAACCAAGTCGAACAGCT 58 NA DesignRelaxed Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073179 3 1 3 127 3L 3901914 3901938 CCAATATTCGTAGAGGGTTAATAGG 58 3901729 3901747 TTCCGGTCAAAGTCTTCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10862 FBgn0035455 FBtr0073139 1 1 1 91 3L 3654321 3654446 TTTCGACACCGACAATGGA 59 3654248 3654270 TCCTTCAGTATCCTCAGAATCTG 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 2 4 4 178 2R 20981954 20981974 TGGTAAGGAGTTTGGAAAGGA 59 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 2 3 3 81 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962846 20962923 TTTATGGAACTCGTGCTTGC 59 NA Drosophila melanogaster 61 CG42383 FBgn0259729 FBtr0299995 3 1 1 60 2R 20312502 20312520 TGAGCACCTTCATGAAACG 58 20312460 20312478 GAGCTCAGATACTGACGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072105 2 1 4 135 2R 19496193 19496944 GAGATTCGTTGCTGTAAGGT 58 19496077 19496095 GAAAGAGGTCCGTCTTCAC 57 NA Drosophila melanogaster 61 CG30185 FBgn0050185 FBtr0072060 1 1 1 81 2R 19432061 19432154 CATCTACGATCTTGTGAAATCCC 59 19432195 19432213 CTGGAGGTGATCGAACCAG 59 NA Drosophila melanogaster 61 RpS16 FBgn0034743 FBtr0071855 3 1 1 184 2R 18494087 18494105 AGATTGAACCCAAGGTCCT 58 18494545 18495270 CTCATCGACGTATTTCTGGT 57 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 3 2 2 84 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361779 18361797 CGTACACTTTGGGCATCTG 58 NA Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 1 2 2 81 2R 17585805 17585908 ACTGAAGGATAAGACCGAGTG 59 17585744 17585762 GGCCTCGTACTCCTTTACC 59 NA Drosophila melanogaster 61 CG3295 FBgn0034573 FBtr0071547 2 1 1 60 2R 16903782 16903803 CGAACTGTCGTTCATATTCCTC 59 16903743 16903761 GGAGTTCTTGCTAATGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lrt FBgn0034540 FBtr0302284 3 1 1 82 2R 16547299 16547318 GTAAAGTGGTCAATGGCCAG 59 16547363 16547439 AAATCGATAGCTCTCGCCT 58 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 3 2 2 170 2R 16150046 16150124 ATTCAGCTACAGGCCATGG 59 16149894 16149913 CTTCATCGTCACATTGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0086584,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 2 6 6 89 2R 15048400 15048491 AGAATAAGGTCACCACCTCTG 59 15048542 15048560 AGCTTCGTCCTATGGTTCC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 1 5 5 80 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844990 14845239 CTAAGACTCTTGTACCTGATGTG 58 NA Drosophila melanogaster 61 veil FBgn0034225 FBtr0086926 3 1 1 89 2R 13367692 13367710 TATACCGGAACTGCTTGGT 58 13367762 13367845 GCCCAGAGAAATAGCATCTG 58 NA Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 3 1 1 126 2R 12979978 12980054 GCAAGTTCTCTACTCCAGGG 59 12980143 12980161 TCACCAGTAACGGGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 2 1 1 72 2R 12760755 12760773 ATCACTTGGGATCAGTGGG 59 12760808 12760896 AAGAACTATCCGTCAATGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8441 FBgn0034086 FBtr0087247 2 1 1 101 2R 12073249 12073329 CATGAAGAATCCGGATAAGCC 59 12073168 12073186 CTGCTTCCCATCACATTCC 58 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 2 3 3 82 2R 11881891 11881974 TTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 Pms2 FBgn0011660 FBtr0087388 1 1 1 80 2R 11257125 11257144 AAAGACAAGACGCAAGTCTC 58 11257002 11257085 AAGATCATAAGCCTCAGACTCC 59 NA Drosophila melanogaster 61 CG8323 FBgn0033903 FBtr0087521 3 1 1 86 2R 10053018 10053099 TCAATTCCTTCCGGCTCAG 59 10053149 10053167 CCATTCCGTAGGACACCTC 59 NA Drosophila melanogaster 61 CG6357 FBgn0033875 FBtr0087638 2 1 1 91 2R 9728397 9728415 TTCGTAAGGAAGAAGCCAC 57 9728467 9728546 AAAGTCAATCAGGAACTTCTCC 58 NA Drosophila melanogaster 61 arr FBgn0000119 FBtr0087702 3 1 1 86 2R 9342731 9342810 CATTAACAAGCTCTGCATCTC 57 9342665 9342686 CAGATATCCGAGGATTCATCAG 58 NA Drosophila melanogaster 61 mRpL18 FBgn0026741 FBtr0087852 3 1 1 60 2R 8644510 8644528 CCTTCAAGGAACCCTCTCG 59 8644550 8644570 TTCTCATGCCTCTTCTCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944,FBtr0087945 3 2 2 80 2R 8396260 8396280 GGTTCTAAGGCATCTGTTCAG 58 8396134 8396220 TGTCAACTGTTGATTCACGTC 59 NA Drosophila melanogaster 61 CG30051 FBgn0050051 FBtr0114521 2 1 1 131 2R 8323827 8323845 TCGATTGGAAGGATCCCTG 58 8323940 8324033 AGTAGACTGCCAGCAACAG 59 NA Drosophila melanogaster 61 CG8858 FBgn0033698 FBtr0088008 1 1 1 80 2R 8084045 8084065 CGAAGATACGGAGGATAATGC 58 8083932 8084004 TTGGATTCACTTCTCTTGGC 58 NA Drosophila melanogaster 61 lambdaTry FBgn0043470 FBtr0088121 2 1 1 60 2R 7224447 7224466 ATATACCGAAGCTCGATGGA 58 7224488 7224507 GGATATTGGGTGATGTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7745 FBgn0033616 FBtr0088119 3 1 1 95 2R 7195545 7195563 AAGTACGAGACGAAGGACG 59 7195680 7195698 TTCGCGTAGGTACTTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 1 1 1 82 2R 5708184 5708260 AGCTTCTTGGTTTAGTGCC 58 5708305 5708324 GGAATAGGGTAACTTCGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30338 FBgn0050338 FBtr0088533 2 1 1 195 2R 5481651 5486092 GACCAATTGACAAGCCATGG 59 5486250 5486268 TAGAAGGCTAGTAGCGGGT 59 NA InUTR Drosophila melanogaster 61 CG8193 FBgn0033367 FBtr0088663 1 1 1 107 2R 4930922 4930998 GAGTGCTGTATGGTGACCT 59 4930833 4930851 TGGACACATCACCCATCAC 59 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 3 2 2 80 2R 4284854 4285130 CTCCCTCAAACGCTATGGA 59 4284792 4284811 TTTATGGTCACCGTGAGGAG 59 NA Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 3 2 2 60 2R 3679897 3679916 TCTCCGTTGTGGATCTTACC 59 3679856 3679876 GCCTTGATTTCGTCATAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088937 1 1 3 110 2R 3609618 3609636 ATGACGTCGATTGACCTGG 59 3607489 3609544 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917,FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 3 6 6 93 2R 3527474 3527492 GGAATCCGTGCTTAGTGAC 58 3527547 3527632 GGATCCAATATCATCCTCGGA 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 1 3 3 81 2R 3390023 3390042 CGACAATCAACCGTGTATCG 59 3390086 3390157 CTTTGGCATTCGACACTCC 59 NA Drosophila melanogaster 61 Tsp42Eg FBgn0033128 FBtr0089024 3 1 1 129 2R 2919297 2919317 CAAATTCGAGCACTTCAACAC 58 2919405 2919840 AACAACGAACACCTTAGATGTG 59 NA Drosophila melanogaster 61 CG40282 FBgn0039979 FBtr0111272 3 1 1 108 2R 618661 619010 AATTCAAATCTGCTGGCCA 58 618571 618590 TGATTTCCTTGACCATGGAC 57 NA Nonspecific Drosophila melanogaster 61 CG1428 FBgn0032967 FBtr0085929 3 1 1 60 2L 21907069 21907087 AGCTGGTTCAGACATTCTC 57 21907111 21907129 TTCCATCTTGAAGCTGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33809 FBgn0053809 FBtr0091813 1 1 1 60 2L 21435580 21435598 CGCTCAGGACTTTAAGACG 58 21435622 21435640 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081165,FBtr0081164 3 3 3 176 2L 19123219 19123237 ATCTACACCATTCTCGGCC 59 19122758 19122777 AATAAAGCCGAACTGCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42305 FBgn0259201 FBtr0299687,FBtr0299686 1 2 2 60 2L 18813142 18813319 AGTCTATCTAAACACCTGTCTTCC 59 18813337 18813356 AATTGCCGCAGTTACTAGTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15160 FBgn0032688 FBtr0081070 1 1 1 85 2L 18593338 18593356 GATGAAGGTATCATGGCCC 57 18593405 18593488 GATGACGAGCTAGCATTGG 58 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300002 1 1 4 83 2L 16559936 16597220 TTTATCGAGGTGAGTGCAC 57 16597267 16597285 TCAAAGGCCAAATAACCGT 57 NA Nonspecific Drosophila melanogaster 61 CG4168 FBgn0028888 FBtr0080716 3 1 1 85 2L 15171529 15172144 CCGGTTTGAGTTCATGCAC 59 15171462 15171480 CCTGGAAGGTCTCATCGTC 59 NA Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0080674,FBtr0100163 3 2 2 112 2L 14810804 14810882 AACATGCCGATAATAGCCA 57 14810956 14810976 GATTTCTTTCGACCTAGACCA 57 NA InUTR Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 2 1 8 141 2L 12482619 12482639 TGTATCCAAGTATTTCGGGCA 59 12458213 12477122 TTGACCAGATCCATTGCCT 59 NA Drosophila melanogaster 61 CG14069 FBgn0032315 FBtr0080175 2 1 1 60 2L 10910427 10910445 GCTCAAATAGCACTGGAGC 59 10910385 10910403 GAAGCGAACGACAATAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17104 FBgn0040496 FBtr0080105 1 1 1 80 2L 10678794 10678911 AGGAAACTACAGAACTGCCA 59 10678954 10678972 GAGCTGTTTCAGTGGTCTC 58 NA Drosophila melanogaster 61 CG4592 FBgn0032162 FBtr0079879 1 1 1 89 2L 9922203 9922278 CAATCAATGGACACTCACCTG 59 9922325 9922347 GTATACCGATAAAGAGATTCGGC 59 NA Drosophila melanogaster 61 Bka FBgn0010520 FBtr0079874 3 1 1 115 2L 9895361 9895442 GGGAATTACAGCTTACAATGGG 59 9895518 9895536 AATCTGATCCTTAAGCCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 3 3 3 80 2L 9338453 9338473 TTTGGTCTCATCAATCACCAG 58 9338513 9338599 TAAGTAATGGCTCTGGTAGCA 58 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817,FBtr0079818 3 2 2 141 2L 9251869 9251952 GTGGCTCAAGTAATGCCAG 58 9251746 9251764 GGTTAAGGGTGTCCTCGTC 59 NA Drosophila melanogaster 61 CG7830 FBgn0032015 FBtr0079613 3 1 1 80 2L 8307065 8307161 TCGTCATGTTCCTGAATGC 58 8307003 8307021 TCTTGTTGTGAGCCTTTGG 58 NA Drosophila melanogaster 61 CG7149 FBgn0031948 FBtr0079496 3 1 1 80 2L 7788446 7788464 AGCAGTATAGACACGAGCT 57 7788323 7788404 CCATTTGGGAACAAACTTCAC 58 NA Drosophila melanogaster 61 Ent2 FBgn0026585 FBtr0079290 2 1 1 60 2L 6563386 6563404 GGCCATCTACTACTTCGTG 57 6563428 6563446 AAAGTACGTGTCGAAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 psd FBgn0086265 FBtr0079238 1 1 1 60 2L 5963884 5963902 CTATTTCCCACAGCCAGTC 57 5963842 5963863 CATAGTTGTTCTGACCACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7239 FBgn0031740 FBtr0079139 2 1 1 265 2L 5802457 5802475 AGCAGGACTTAGGCATGTG 59 5802703 5802781 TTTGACTTGCCTGAACTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 3 5 5 88 2L 5155461 5155480 GTTTCTGTGAGAAGACCCTG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 2 3 3 91 2L 3017840 3017862 CGGATTATTTATACCACCTGGAC 58 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 3 4 4 60 2L 2768914 2768934 AAATCAGTACTGCCTCAACGA 59 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15393 FBgn0031429 FBtr0077784 2 1 1 155 2L 2489971 2489989 AGCTGACAGACAACCAGTC 59 2489834 2489852 CTAATTGCTGGGTGCTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4267 FBgn0031405 FBtr0077751 2 1 1 82 2L 2242931 2243566 ACGTCATCAAACAAGGATAGTC 58 2243607 2243627 GGTATGCGTTCTTAACCTTCC 59 NA Drosophila melanogaster 61 CG31679 FBgn0051679 FBtr0077809 2 1 1 104 2L 2237966 2238052 CAAGTTATATCCGATGTTATCCACC 59 2237886 2237905 GGTGATAATACCAGCTCCCT 58 NA Drosophila melanogaster 61 CG13949 FBgn0031288 FBtr0078017 3 1 1 190 2L 855567 855587 GATCAACGACAAATACATGGC 58 855802 855877 TTTCCAGAGCCTTCAAGGT 58 NA Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 1 1 1 60 2L 272504 272570 CATATGCGACAAGAAGGGC 59 272462 272485 GGAGCAATTACGACATATCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 2 2 2 123 2L 156338 156430 TCCTTGAATCGGGAGTGAG 58 156514 156535 CCAGAAGAAAGCAATAACTCCC 59 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415,FBtr0078163,FBtr0078164 2 3 4 80 2L 28067 28086 CGAGTGGACTGACTACAGTC 59 27482 28026 AAGCTGTGAGAAACTGTATGC 59 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 2 2 3 80 2L 232088 232299 GCATCATACTTCTTTACTGCCT 58 232029 232048 TCGGTGTTATCAAGTCCCAG 59 NA Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 2 2 2 81 2L 1152224 1152242 GTGGAGATCGTCAACTCCA 59 1152100 1152183 GTAAAGCCAACTCGGTATAATCG 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 2 5 6 196 2L 1726645 1727654 AAGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA InUTR Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 2 2 2 85 2L 1855724 1855745 GTCCCATTGAATTGCATAATGC 59 1855791 1856441 ACAAATGGTGACCACAACG 59 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 3 3 3 80 2L 2040349 2040429 TCACAGTGCTGATTACACC 57 2040473 2040491 CAAGCATGGCATCTTTACG 57 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 2 4 4 98 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492328 2492346 ACGCGATCGTAGATAAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 2 2 2 97 2L 2718916 2719013 ATCATTATGCTGACTTCCTGG 57 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 3 2 2 83 2L 2810574 2810592 GATCAGCAGAAGGACTCCA 58 2810637 2811162 CTTCATCCACTCATCTTGCAC 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077606 3 1 3 116 2L 3292714 3292732 CACGGAGAGGTCCTTTACG 59 3292564 3292634 CACACTTCCAGGGATACCG 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 1 4 11 179 2L 3626210 3634250 ATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504 3 1 3 139 2L 3869793 3869881 TCCCTACAATGATCAAACGT 57 3869983 3870001 TAACCGTAACTCTTTGGGC 57 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 2 5 6 91 2L 4307446 4307566 TACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077381 3 1 2 93 2L 4795868 4795886 CTCCAAGGTCGCTACTACG 59 4795943 4796077 GTGTTAAGGACAAACCGCA 58 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 1 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 1 6 6 61 2L 5042504 5042522 CAACGTGGAGTTCGATCAC 59 5041807 5041825 AGTCGAATTCCTGAGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 2 5 8 93 2L 5069211 5070107 GCGCGTAAGACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026,FBtr0111024 2 2 2 106 2L 5077705 5077784 AACTTCCGATGGTACCGAG 59 5077617 5077635 TCGATGGAGAACAGACCAC 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0091705 3 2 5 80 2L 5110957 5110976 CATGGCGTCCATCAATTACG 59 5111019 5117592 ACACGTTCTTGCTCCTCTC 59 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 3 3 3 81 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 2 1 2 106 2L 5765981 5766000 ATCAGTGCTCTATTGTGCGT 59 5763302 5763320 TAAGAGTCGCACTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 3 4 4 112 2L 5984932 5985036 TACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 2 2 3 81 2L 6110156 6110174 GATTAGTACGCGACTCGGT 59 6110219 6113042 GATCTTCTTGACACCGCTG 58 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251 3 1 2 138 2L 6343932 6344168 TGAATGGAAGGTCTTTGGCT 59 6344269 6344347 GATGTTGGCATCATCGTCG 59 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 3 2 2 88 2L 6640925 6645982 TTGGAAGCAAGTATACCTCGT 59 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 2 5 5 82 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791313 6791526 TACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 2 5 5 82 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791313 6791526 TACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 3 5 5 133 2L 6924281 6924301 GTTATCATGTACGACCAGGAG 58 6924396 6924698 TTCTTGATTTCGACCTGCT 57 NA Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 1 2 2 82 2L 7391786 7391868 CCAGTAAAGAATACGCACTGG 59 7391724 7391742 CAAGCTGACCATTCGATCG 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0100158 1 1 4 194 2L 7649075 7649315 CAAATTGGCCAGATTCTGGAG 59 7648833 7648851 CTTCTTTACCGCTTGCAGC 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079513 2 1 5 107 2L 7698544 7698738 TCCTTACAACACTGAATTTCCC 58 7698458 7698478 GGGAAATTAGCTATAGCAGGC 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079514 3 1 5 82 2L 7698768 7698788 CGTTATCCTGGTCAAACATCC 59 7698076 7698727 TCGTACGAAATCGAATCTTCAG 58 NA Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 1 2 2 60 2L 7817639 7817737 ACCTGTATAGATTGTCAGGACTC 59 7817755 7817775 ATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 1 4 5 86 2L 9272530 9272551 CGCATTAAAGAAGCAAATCGAG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 3 4 4 80 2L 9519063 9519152 AAATACGTTCCTGGACTGTG 58 9519195 9519213 CGTAAACGATCGCAAAGAG 57 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 3 3 3 80 2L 9911768 9912139 CACTTTGACACAATGGCCA 59 9911706 9911724 CTCCCTTAGGTATCGCACG 59 NA Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 1 3 3 80 2L 10774660 10774754 TACGACAATTGTCCAATTCTCG 59 10774601 10774619 TTTCGCCGTGGTAGTAGTC 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 2 3 5 81 2L 10990711 10990729 ATGTGGACAATAGTCCGGA 58 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 2 3 5 81 2L 10990711 10990729 ATGTGGACAATAGTCCGGA 58 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 1 2 2 80 2L 11003231 11003521 CATGATCAAGGGAGTCACG 58 11003169 11003187 GAGGTGACACAGTTGATGG 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300115 2 1 4 104 2L 11162334 11162352 GAAAGGGATCTCGAGTGGG 59 11160323 11162267 GTAAGAGGTTCCTCCTTGGT 58 NA Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 2 1 1 60 2L 11695187 11695206 ACCTGACTAGGAACGTTGAG 59 11695314 11695333 CTGTCGAATCCCAAGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 1 4 4 117 2L 12352776 12358051 CCAAATCGCAACCAAAGTC 57 12358129 12358150 CCACGAACATCTTGATATTGTC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 3 2 17 137 2L 12726994 12727012 AAGCTTTCCAAATCGGCTC 58 12727111 12728592 GATACCCTGTAACAACTTGGC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 2 2 17 143 2L 12736123 12736141 TTATGCATTGTCCCTCCGA 58 12736248 12737968 TAGCCAGAACCTGAAATGC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090023,FBtr0090026,FBtr0090022,FBtr0090029,FBtr0090025,FBtr0090014,FBtr0090024 2 8 17 92 2L 12724261 12724279 GTGACAAGGAGATTGCGAC 58 12724333 12724774 CTAATGAAACCAGGAACGGTG 59 NA Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 3 2 2 60 2L 13164196 13164326 CCTTCGATACGACCTGTCC 59 13164154 13164173 TTCTTGTCGTCCCTTATGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 1 3 9 80 2L 13274310 13274331 GAGCGTATCATACCGATAACTC 58 13274372 13276260 GGAGACTCCATTACCACCA 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 2 3 9 80 2L 13274314 13274337 GTATCATACCGATAACTCTAGAGC 58 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 2 2 2 80 2L 13300858 13300937 GTTACATGAGTATTTCGACTGGG 59 13300976 13300995 CAGGAGACCAGAGTGATGAG 59 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301495 1 2 4 152 2L 14636153 14688477 GAATGCAATAGGGCATCGC 59 14611857 14611875 ATCAACCGAGTACGTCAGC 59 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 1 5 5 159 2L 14977341 14977359 ATGAAGGCTTTGACAGGTG 58 14977069 14977218 TAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080714 3 1 2 120 2L 15246262 15246280 ACCAGGTGTGAACGTAGTC 59 15241508 15246178 ACAATGATCCCGGACTTCG 59 NA Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752 1 1 2 107 2L 15552866 15554520 TTTAGCAGCCAAATACCCA 57 15554591 15554609 ATTTGGTTGTCTCTTGCCA 57 NA InUTR Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752 2 1 2 108 2L 15552865 15554520 ATTTAGCAGCCAAATACCCA 57 15554591 15554609 ATTTGGTTGTCTCTTGCCA 57 NA InUTR Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 3 4 5 161 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737811 15737831 ATCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 1 4 5 80 2L 15760339 15760416 CGATCCGGATTACAGAACC 57 15760277 15760295 GGATAGTTGGCTCCATAGC 57 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 2 2 3 96 2L 16044330 16044351 GGATCGACAGAAATTGGAACAG 59 16044466 16044802 CGTAGTGTTCATGATGTCATGG 59 NA Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 1 2 2 80 2L 16247175 16247261 GATTAGAGATAAACGACGCGG 59 16247115 16247133 TTTAGTCTCGCCTTTGGCT 59 NA Nonspecific Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 1 2 2 80 2L 17158737 17161865 GAGTCAACATCGATCTGCG 58 17161908 17161927 GATAAAGTCCGGAACTCTGG 57 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 3 4 12 95 2L 17717904 17717922 CTCCCTTCAATCCCAACGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081213 3 1 6 80 2L 19411587 19411605 TATCATCGTCGTTCCACAG 57 19410632 19411545 CTAATAGAGCATCCAGACGTC 57 NA Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 3 2 2 80 2L 19419107 19419125 AACTTCTCCTGCTGTTCCT 58 19419165 19419318 TCTCTAGGTTATATCGGTTACCC 58 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241 3 1 2 159 2L 19487939 19487959 AGAACCTAAATGAAGTGGCCT 59 19488080 19488194 TTGAGGCTCTCGGATTGAC 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 2 5 6 80 2L 19511368 19511440 CCCTGGTCTACAAGAATGC 57 19511306 19511327 GGATGCAGTTAAAGAAGATCTC 57 NA Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 3 2 2 107 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527940 19528094 ATAAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 1 2 2 103 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054950 20054968 CGGAATTTCGTACTGCTGC 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081353,FBtr0081352 2 2 5 158 2L 20334699 20334720 ACGATACCAAAGAACTAGAGCA 59 20336394 20336472 CACCTGCTTCATTGTTCAGG 59 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081390 3 1 2 81 2L 20677480 20677556 AACGATAGCTAAAGCATTCCC 58 20677597 20677617 CAACTGAACATTGTTGTCGTC 58 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081504 2 1 3 102 2L 21138022 21138721 TCTTGATCAGGGAATGCGT 59 21137938 21137956 TAATTGGCCTCTCGTCAGC 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 2 5 5 90 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184210 21184286 CACGATGAACCAACTTTAACTC 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 1 13 13 80 2L 21289504 21289524 TTATACAGCCCAGTCTTGGTC 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085901 1 1 4 87 2L 21719636 21725078 AAGACGATTTGCTATGGCC 58 21725129 21725147 TCAATGCCGAACTTAAGCG 58 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 1 3 3 80 2L 21759352 21760485 GAGCTGGAAGAAACTTCATCC 59 21760525 21760545 CTTCATCGCATCAAATTCGGA 59 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 2 3 4 98 2L 22141682 22141701 TGATTGTAAGCCTAGATCGC 57 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 1 1 1 107 2L 22443181 22443205 GCGACGTATATCAAGAACTTATACC 59 22443329 22443347 TTTGGCAGGAACTGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269 2 1 2 121 2R 126656 130279 ATGATATTGAGGAGCCTCCT 57 126554 126572 AGTAGTTGCCAAATTCCGT 57 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 1 3 3 80 2R 1213437 1213458 TAGAACTGCAACCAAATTTCCC 59 1213499 1213580 CAGCTTCTTTAACCTGCCC 58 NA Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 3 2 2 93 2R 1249045 1249114 GTGACGAAGATGGTAATGAGG 58 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 3 2 2 170 2R 1846871 1846955 CTTCATCGGAGCAGAACTG 58 1847088 1847107 AATATCAGGAGGCAGGTCAC 59 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 3 4 4 79 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515389 2515407 GGTACCAGACTTAGCAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 1 4 4 69 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515399 2515417 TTAGCAGTGCCATAAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 3 2 2 89 2R 2699508 2699526 CGACCATGAGAACTGTGAG 58 2699578 2700294 ATTATCGTTTGCACATTGGG 57 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 2 11 11 89 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764847 2764865 GAACATCCTTGACATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 1 5 11 135 2R 2764827 2764845 CCGATCAGGCTGAATTTGG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 2 2 2 70 2R 2771955 2772031 TTAGAGAAGCTGGGCATCC 59 2772065 2772083 GACTTATCGGCGAACAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111071 3 2 59 80 2R 3225051 3225069 GGGAAAGTATAGTTGCCGG 58 3219876 3225011 CTGGGAGGTACATTAACTATGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082 3 1 59 81 2R 3247224 3247242 GTGAGGATTAGGCAGGAGG 59 3236470 3247182 ACTTGTACCATCTATACACCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111061 2 1 59 81 2R 3244151 3249237 GATTGGTCATCACAGAACCT 57 3244089 3244109 GCTTGTCTGATATTCACACCA 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 2 3 59 80 2R 3236477 3244494 CCCATGCCAGTTTATAGATGG 58 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911,FBtr0088912 2 2 3 80 2R 3481682 3481766 TATATGCTGACTTCAGGATCAC 57 3481807 3481825 GGTATTTCAGCTCGTGAGG 58 NA Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 2 2 2 98 2R 3860604 3860624 TATCTGGAGGACAACGATTCG 59 3860681 3860761 ATATAGAACCTGCAACTCCTCG 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 1 3 4 130 2R 3872487 3872505 GGGTGATGAGATCGACGAG 59 3870502 3872393 ACATACTCGGCCTTAACCG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 3 4 9 149 2R 4562375 4563993 CAAATGGACAGCTTCTGGG 58 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718 1 1 3 89 2R 4607274 4607367 CAACTATCAGAACTTCGATATGGG 59 4607208 4607226 TTTCCCTTGATGGTTCCGT 59 NA Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 3 1 1 110 2R 5287500 5287518 CGTTCTGGGCGTATTTCTG 59 5287329 5287347 TCTGTTAGCGGAAACATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 3 3 3 102 2R 5475199 5475287 CCAAGGGTATCAGGTCCAC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 2 2 2 81 2R 5491677 5491759 TCGTTCAGGAATATTCGCC 57 5491804 5491822 AATGTGACCCATTCGTGTG 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112901 1 1 5 80 2R 5884716 5885219 CAAGCTAGCATTCCTAGACAC 58 5884656 5884675 ATCACGATATTGCGCTTGAG 58 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 1 2 2 80 2R 5966680 5969022 CACTAACGATCTGGCAGAC 58 5969066 5969084 GGAGATTATCGACGACTCG 57 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993943 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444 3 1 4 192 2R 6038524 6038542 CTTCAAGCACAACACGTCC 59 6036935 6038371 TTGTACTACCTCCAGATTCTCC 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 1 10 17 80 2R 6182434 6182453 CAGGTCATTCGTCTGTTTCC 59 6182814 6183256 GTTCTAGATTCCCGTTAAAGATGTC 59 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 3 2 2 85 2R 6206429 6206447 GATACGAACTGAGCGAGGA 59 6206496 6206577 ATCGCAGGGAATCAGATCG 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 1 2 4 80 2R 6731013 6735972 TCCATTGTACTCAAGGCGG 59 6730951 6730969 ACCCAAATCCTCGTCAGAG 59 NA Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0113065 1 1 2 82 2R 6792309 6792327 GAATCATCGGCTATTGGCG 59 6792368 6792560 CAGAGGATAAATTTCATCCTGTGG 59 NA Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088200,FBtr0088199 3 2 2 82 2R 6797463 6797481 AATGTTCGCTTTGAGCGAG 59 6797607 6797625 TCATTTCCTCGGTGATCGT 58 NA DesignNoJunction Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 1 2 4 113 2R 7784184 7784205 GGAGTCTGGATAGTTAGCTACC 59 7784029 7784111 ACGACAAATCTCGATTGCAC 59 NA Drosophila melanogaster 61 CG13175 FBgn0033693 FBtr0100143 3 1 1 60 2R 8071041 8071063 CTAAGCATTCGGGAGTTTATGAG 59 8071144 8071162 GAACGGCTGTTAGATCCAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 2 1 1 60 2R 8317039 8317057 TCTGCAGAGAACTCTCAGC 59 8316941 8316960 CTGTGAAGCGTTTGAATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 2 3 12 92 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305323 9306499 AACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 3 2 2 81 2R 9391977 9391996 CTTTACGCGTTACTCAGTGG 59 9392038 9392115 GTCTTCTTTAACCGTCGTCTG 59 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 1 2 2 102 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459376 9459396 TTCCTAATGCGATTATCAGCC 58 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089258 2 1 2 84 2R 10389957 10390044 TGCCTACAAGTTTACCCGA 58 10389891 10389915 CACTCTGATTGAGATAGATTACAGC 59 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257 3 1 2 89 2R 10390203 10390221 ATACAATTCCTGCACGGCT 59 10389958 10390153 CGGGTAAACCTTTATTCTTCCC 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302294 1 2 4 80 2R 10752555 10752688 AGGGAAAGTCTGACAAATCCA 59 10752495 10752516 AATCGTCGTTGACTTTAAGCTC 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 3 3 5 171 2R 10797870 10797888 GTAAAGCGACGCAAGTCTC 59 10793447 10797735 CAATGCAGGAATCTGCCAC 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 1 8 13 82 2R 11835563 11835581 CTAACAAACCTCCGCTTGC 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 3 8 13 90 2R 11835571 11835589 ATCCGCTGCTAACAAACCT 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 3 2 5 89 2R 12442680 12442698 ATATTGAGAAACGCTGGCG 58 12442745 12443120 CATTAGAGGTAGTTGTTTCTGAAGG 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 1 3 5 80 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 3 3 5 82 2R 12442915 12442934 CATCAGTCGCAGTTGTAGTC 58 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 2 3 3 80 2R 12454485 12455296 CGAATTGGAGAAGATCCAGC 58 12455338 12455357 AGTAGAATCTTCCCGAACCA 58 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 2 3 3 80 2R 12509259 12509278 ACAATCAATATGCTGGGCAC 59 12509319 12509407 GGATACATGGATTAGTGCGTC 58 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 3 3 4 148 2R 12747151 12747173 GCGGATATGTCAAAGAGATTCTG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 1 2 3 168 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752379 12752397 ACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0087048 1 2 3 80 2R 12818774 12819977 CATCGATTCGGACTCACCA 59 12820021 12820039 CCACAATGATCGCAGAACG 59 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 3 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 2 2 6 100 2R 12896438 12897014 ATCATTGTGAGACCGAGGA 58 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273341,FBtr0087009 3 2 9 164 2R 12959348 12959484 AATCTGAAGACCAAGAGATCC 57 12957235 12957254 GAAGGGATCGTATTTGTCCC 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 2 7 9 80 2R 12959277 12959296 GAGATGACAACACCCAAACC 59 12958995 12959238 GACTTGAGCTTGAGTGTTATCAC 59 NA Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 1 3 3 81 2R 13563331 13563423 CGAAATCCAGGCCATTAGTC 58 13563269 13563287 GGCATTCACAGAGGTTGTG 59 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 2 5 5 81 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042923 14042942 TTAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086690 1 1 8 107 2R 14311151 14311169 TCTCCAAACCGTATCTGGC 59 14311238 14311649 ACAGGTTGGCTGTATTATCGA 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 3 3 4 103 2R 14522433 14523655 TTGATCAGACCAATGTGTATGC 59 14522351 14522369 CAATTCATCTTCGCTGGGT 58 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631 3 1 2 113 2R 14713177 14713533 AATCCAATCATTCCGGCGA 59 14713082 14713101 GTACCTCTTCATTGGGTCCC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0100174 2 1 6 126 2R 15047423 15047441 GGTGAACTCACAGATTCCG 58 15047531 15047693 TTGCTGATACTGAGAGGGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 3 5 12 170 2R 15062802 15063699 GCAATTCACTTGGACCACG 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 1 10 10 80 2R 15298013 15298105 CAACAAGAGTCACTTTGTCC 57 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 3 10 10 80 2R 15298142 15298160 ACAAGGTGGATATGCAAGG 57 15298007 15298099 AATGGAGGACAAAGTGACTC 57 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 1 2 3 89 2R 15316015 15316036 ATTCGAGTGTTCTCAGAAACTC 58 15316778 15316854 TCCTGGCGTAATCGTATCG 59 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 1 1 2 69 2R 15671499 15671519 GCTACATTCGCATTGACTCTG 59 15671385 15671403 TGTCTATGTTGGCTTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 1 2 2 80 2R 16518233 16518254 ATTATGGAGCGCTTCATAAAGG 59 16517756 16518192 ACCCAGATAGACGATCAGC 58 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 1 3 3 136 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181862 ACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207 1 1 6 167 2R 17286000 17286402 TAACTCAATCGCGACAACC 58 17285851 17285869 GACTCCGTATCCAGATCCT 57 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207 2 1 6 168 2R 17286000 17286402 TAACTCAATCGCGACAACC 58 17285850 17285868 GGACTCCGTATCCAGATCC 58 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 3 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801 3 1 2 114 2R 17960545 17960564 CCTACTACACCTTCCGTGTG 59 17960380 17960468 TCAATATCGGTACCCACCG 59 NA Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071858 3 1 2 100 2R 18509794 18515311 AACGGACGACAGTTACAGG 59 18515375 18515393 TCACAACGAGGGAGTACTG 58 NA Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859 2 1 2 88 2R 18516053 18516387 CTCGCACCAGTACAATCAC 58 18517085 18517104 CAGTGAGATCTTGGGAAAGC 58 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273314 3 1 5 116 2R 18595919 18596192 TACATTGTGGATAGGGCCG 59 18596272 18596290 CTGTCCCATTACCTCCTCG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 2 10 13 138 2R 18814848 18814866 TGGCTACCGTTCTACTACG 58 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 2 8 13 141 2R 18813126 18814633 GGCTTATAATATTGTTCTGCGG 57 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 3 2 2 128 2R 19767765 19767783 AGTCAGCATGTGATACCCA 58 19767875 19767969 AGAAGATTCCCAGGCTCTG 58 NA InUTR Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 1 1 2 100 2R 19953829 19954094 TCCCAGAATGCAATCTGGG 59 19953664 19953685 CGTCATTGAACAAGTTACTGCA 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 2 3 6 122 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281024 20281822 CGTTGCTGTAGTTGTCTCG 59 NA Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 1 2 2 113 2R 20557266 20557284 ATTTGTTCGAACCGACTCC 58 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0072411 3 1 2 179 2R 20828953 20829780 AAGCAAAGAAAGTCTCCTCC 57 20828793 20828811 GGAAGGGAATGTTGTAGCG 58 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 1 4 4 177 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 3 3 4 89 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510695 10510715 ATAAACAGAAAGTGGCACAGG 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299982,FBtr0299984 1 2 10 150 3L 300968 300986 CTGAAAGTACGGATGTGGC 58 301100 301172 ATCATAGGTGCTACTGCCG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299982,FBtr0299984 2 2 10 151 3L 300968 300986 CTGAAAGTACGGATGTGGC 58 301100 301173 TATCATAGGTGCTACTGCCG 59 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072703 2 1 3 81 3L 1528070 1529119 AAAGATCATCATAGGCGTCGA 59 1528009 1528027 CTTGTCCGGGAAGTAGTCC 59 NA Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813,FBtr0072814 2 2 2 95 3L 1639045 1639063 ACGTCTTCAAGCACAATGC 59 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793 3 1 2 88 3L 1761963 1762134 TCAGCATTGTGATCCTTGC 58 1761893 1761911 TATCTTAGCCACCGTCTCC 58 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072964 2 1 4 82 3L 2503198 2503216 AAGGGAACAAATGGAACCA 57 2500454 2503153 TAGGGATACGTGGGATTCTC 58 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 1 2 2 80 3L 2961808 2961826 TCCGACTCTCCTATACGGT 58 2961867 2961947 GGACAATTGTCCAGATTCTGAG 59 NA Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 2 2 2 154 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324491 3324510 AGGGTCGGTAGTACTGAGAG 59 NA Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 1 1 1 162 3L 4115327 4115346 CTGAACTCGGTGGTTATCTG 58 4115022 4115040 TGTTCGATCCGTACTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 2 2 4 155 3L 4290904 4290922 ACTTTGGTCAAATCCTGCC 58 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370 2 1 2 89 3L 4811658 4812902 CAAGATCACCGATGATGTTCG 59 4811589 4811607 ATACTGGCGCGATTAACCT 59 NA Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 1 1 1 109 3L 5227732 5227750 CAACCGTATGAGAGGAGGA 58 5227871 5227889 GTTTATCCAGTCGCACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 1 6 6 69 3L 5765429 5765447 AACGGCTAGAGGATATGGG 58 5765537 5765555 GAGAATTGCTTTGTGGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 mp FBgn0260660 FBtr0301110 1 1 11 133 3L 7012988 7043672 CTAGGATTCAGCTACGCGT 59 7043769 7043787 GAGGAATGCCTTGAAGGTG 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552 3 1 9 116 3L 7158112 7158132 GTCAAACCACGGTCATATTCG 59 7157941 7158036 GACTTTGCTTGTGTCTGTAGC 59 NA Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 1 2 2 83 3L 7352943 7353032 AATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0301611 2 2 3 92 3L 7375356 7375374 ATGACCAGGGAGTTGATGC 59 7375428 7375500 AATGATCGAGAATGCTTGGTG 59 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 3 2 2 81 3L 7750857 7750941 CTGTAATGATATCGACGAGTGC 59 7750980 7751001 GCATATGAATTCACCAGGAAGG 59 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 2 2 2 68 3L 8115190 8115208 TACCTGGATATGTGCTCCT 57 8115295 8115313 GAATATGGTCAGCACTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 1 2 2 75 3L 8177587 8177606 GTCTACTAATGGGCATGCTC 58 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 3 3 3 80 3L 8269588 8269930 AAACAATGGAGGACGTTCC 58 8269971 8269992 AGGTGATATAGATCGAAGTGGA 58 NA Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 2 2 2 80 3L 8301052 8301199 TGCAAGTGACTCAACTTTACG 59 8300992 8301012 ACTTCTCCACAATGTTCTGTG 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675 3 1 5 133 3L 8346683 8346701 AAGAACAGCCCAGTACCTC 59 8346516 8346588 CAAGTGGGACTCACAAATAGC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 3 3 13 166 3L 8627806 8627827 CATGACAGTATCATGAAGCAGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 3 5 5 83 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986076 8986096 TTGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 1 2 2 120 3L 9011175 9011908 CATACCAGATCCGTTTCCG 58 9011073 9011091 CTGCTTCCATAGATCGTCG 57 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 1 5 5 124 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 3 2 3 152 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574672 9574691 GATTGAGCAACTCGATGTCC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 3 3 4 174 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856553 9856572 AATGATCTCATAGACGGCTC 57 NA Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 2 1 1 84 3L 10458463 10458481 GGGTCAACTCTCGATTCCC 59 10459301 10459321 GGTAAGACTAAACCAAACCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 2 3 3 86 3L 11152077 11152408 TACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 3 3 3 229 3L 11166958 11166976 TGAAGTATCTGCTCTTCGC 57 11167239 11167654 AACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 3 3 3 60 3L 11622555 11622573 ACAGTGGACTATCGCACTC 59 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 1 5 5 115 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076053 1 1 5 116 3L 12021967 12054088 GGAAAGTGATCTCCAGTCCA 59 12021870 12021888 CAGGTGTCGATCAGTTTCC 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076053 2 1 5 117 3L 12021969 12054089 CGGAAAGTGATCTCCAGTC 57 12021870 12021888 CAGGTGTCGATCAGTTTCC 58 NA Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 3 1 1 83 3L 12130342 12130361 TGGATACAGACGTTCATCCA 58 12130461 12130482 AGGTGCAAATGTCTGATTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 2 4 6 119 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205759 12205777 GGACAAGATCGTAACTGGG 57 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 3 3 3 90 3L 12788109 12788128 GATTACAAATCCGCCCATCG 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 3 4 4 80 3L 12801569 12803316 TAAGATGGGCATTCGTCCA 58 12803360 12803378 CCGATGGGATTAAGCTGTG 58 NA Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 2 2 2 96 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002072 13002092 GGTTTCGCTAAATCCAGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 3 4 4 100 3L 13884420 13884438 AGCTACCACTACAGCAACG 59 13884043 13884356 TCCCGATAAATCTGGTGGG 58 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127 1 2 4 157 3L 13876428 13879190 GTGATTTGCCGGAATACGG 59 13867040 13867058 TTTATCGCCCAGCAATGTG 58 NA Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 1 3 3 112 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033094 14033177 GGCTTGTTAAAGACCTGCTC 59 NA Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743 3 1 2 89 3L 14310357 14310375 AGTCGCACTTATTCCACCT 58 14310425 14359856 GGATGTCACCTTCAACTTTAGC 59 NA Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 2 2 2 80 3L 14932884 14932962 AACTCCAATGGGTCCATGG 59 14933006 14933024 AGTAGAGCAGTTCTCCGGA 59 NA Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 3 2 2 92 3L 15010306 15010382 CAAGTCAGTGGAGATTTGGG 58 15010233 15010251 TGCGGCAAATAGTTCAAGG 58 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 2 1 3 96 3L 15516678 15516698 AGATATAGAAGCCGATACGCC 59 15515671 15516626 GTTAAATGGTCTATCTGAATGTGGG 60 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 1 2 2 85 3L 15673901 15673979 AATCAAGGAACCTGAAACGC 59 15674027 15674045 ATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037 1 1 5 108 3L 15851242 15852920 GTAACACAGCGTCTTCCAG 58 15845304 15845322 ATGCCACAATTTCGTTCGG 59 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 3 4 4 91 3L 15964326 15964404 TACCATTCTAGGTCGAGGC 58 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 1 3 10 84 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 2 3 5 83 3L 16983964 16984118 GTGAGCACATTCGTAGATGAC 59 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 3 2 2 98 3L 17393990 17394009 ATCGTGTTATCAGGACGACC 59 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 1 2 2 82 3L 17423270 17423288 CGAGATATCGCCCTTCCAG 59 17423149 17423225 TCATGTCATGACGTCTTGGA 59 NA Nonspecific Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 1 2 7 110 3L 17527654 17531772 AACAGTGATAACGACTCTGG 57 17531914 17531932 GATTCTGACATACGGGTCG 57 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075007 1 1 12 93 3L 19300191 19300431 ATTTGCACGCATTTCAACTC 58 19300117 19300135 TTGTGTCCTCCCAACTACC 59 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 2 2 2 116 3L 19598218 19598236 TAGACATGATCCGCAGTGG 59 19598065 19598141 TTGTGTAGCACATAAGATCCTG 58 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 2 4 4 110 3L 19620620 19620639 GGTGTACGAGGATAAGTTGC 58 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 1 2 2 60 3L 20420593 20420614 GGATAATTATCCAACTTGTGCG 58 20420502 20420573 GCTGGCAATCAATGTTTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 2 3 5 95 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505479 20505633 AGATCACTGGTAGCTTTCCC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 1 2 18 172 3L 20812560 20825954 GGAACGCGAAGAACAAGTC 59 20826086 20826108 CCACCTTCTTAACATAGTTGGTG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317 3 1 2 80 3L 21191191 21195855 ACTACTACAACTACGTAGCGC 59 21191131 21191150 ACTTCGCTTAGGGTGTACTG 59 NA InUTR Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 1 5 5 110 3L 21192059 21192082 GATGGTAGACATATCTACAACCTG 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 2 2 2 125 3L 21276339 21276359 ATTTCCATGATGGTCATCTCC 57 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421 1 1 3 96 3L 21521991 21522071 TTTAAGGTGACGAGGTTTCG 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 1 3 3 80 3L 22284253 22284339 CTTACCAATTGGTATGTTCGAC 57 22284378 22284398 GTCAAGTGATTGAATGCACTG 58 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536 3 1 2 112 3L 22727829 22728019 TTCATGGAAACGTTCTGCG 59 22727735 22727756 GTTATTCTCGGGTAGAGTCTCC 59 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0113437 3 1 5 145 3L 22753327 22770215 ACAATGTGGATCAGACGGG 59 22770324 22770342 ACGATACTTGGCCTCTGTC 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 2 4 4 116 3L 23560302 23561655 TACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113343 3 1 21 195 3R 111914 120843 TAAAGTTCACCGCTTCTGC 58 121000 121301 CTTGATGTTGTACTTATCGCG 57 NA Nonspecific Drosophila melanogaster 61 cpx FBgn0041605 FBtr0300790 2 1 21 172 3R 114889 120852 ACAAAGAAGCGCTGTAGGA 59 120988 121006 TATCGCGAATGTCTTGCCT 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0300936 2 1 2 80 3R 134169 134353 GTTGTGGTATTTGCTGTGCA 59 134395 134414 TGGTCTGAGTAGGTTGAGGA 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 2 4 4 80 3R 534707 534725 TCGAGGATAAGATCCGGGA 59 534768 534897 GTTTCAGTTCCTCTTGCGAG 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 3 4 4 80 3R 534701 534721 AGTCCATCGAGGATAAGATCC 58 534763 534891 GTTCCTCTTGCGAGAAGTG 58 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 3 2 3 81 3R 1008597 1009507 GTGTGCTAGATATCGAGCGT 59 1008535 1008555 CAGGAACATGGTTAGCTTGTG 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 2 4 4 80 3R 1401030 1401048 GCATTCTGTGCAAAGAGCT 59 1401086 1401170 CTGAGTCATTCAACTGATAAAGTCC 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 1 4 4 80 3R 1400703 1400973 GATCCTAAGGTATGCTGCGA 59 1401016 1401034 AATGCCGATCTCCTCAGAC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0301946 2 1 9 81 3R 1827454 1827801 TTTATAGCACCAAGAAGACGTG 58 1827394 1827412 ATGGATGTAGTCCTCGCTG 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276,FBtr0089277 2 2 4 136 3R 2552944 2565280 ACAATCAGGGTGATAACTCC 57 2537545 2537563 TATCTCGATCCTCCTTGGG 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 1 4 11 91 3R 2724251 2734255 GTCAGTTTGAACGCAAACG 58 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 3 2 2 81 3R 2909299 2909421 TGCATGCTAGGTATTCAGCA 59 2909237 2909255 GGATCCTGTACCACCATCG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 3 8 9 91 3R 2926913 2926936 GAAGATCAGCTATGAGAAACAGAC 59 2925231 2926863 TCAGATCAAGCGTTCTGCT 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612 2 2 9 80 3R 2946847 2947004 CTCGAAGACTTGCTATATTTGC 57 2946788 2946808 GATTTGTTGCACTGCATACAG 58 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0091512 3 1 2 82 3R 2973455 2973473 GTGGACAACACAGATGGGA 59 2972806 2973411 TAGATGGGTACAATAGAGCCG 58 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 1 2 2 94 3R 3077084 3077102 ACCACTTCAGCTCCTAGAG 58 3076953 3077026 AAGACATTGGTCATCGACG 58 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 1 2 2 80 3R 3612901 3612981 TAACTCTGTTTCACAGGTTCC 58 3612841 3612859 GTTAGAGGATCCGATCGGA 58 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 1 3 5 179 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 3 3 3 106 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723663 TATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 3 2 2 80 3R 3804722 3804740 TGCTACTCTCCGGATTCCT 59 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 2 2 3 95 3R 4068184 4068202 GATCGTATCGCTTAAGGGC 58 4068005 4068127 CTACTGCTAGGTTGAATCTGC 58 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081846 3 1 3 91 3R 4184115 4184200 TAAGGCTGAAGTAGTCCAGG 58 4184254 4184272 CAATCTTCTCAGTCGGCTC 58 NA Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 2 2 2 80 3R 4865745 4865765 GAGACAGCCAGATTATCTTCG 58 4865804 4865900 TCTTACCGGATCCATATTTGAG 57 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 1 3 5 124 3R 5057888 5057906 TATGTCTACATGGGTGGCC 58 5044472 5057800 GTGGATGTGGTAATCGCTG 58 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052,FBtr0082054 2 2 4 102 3R 5195422 5196744 CGGCCAGTATATCGCTCTC 59 5195338 5195358 CCATCGTTATTCAGCAATCGA 59 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 2 3 3 84 3R 5590341 5590415 AACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114583,FBtr0112577 2 2 5 196 3R 5755445 5756100 AAAGGAACCCATTGAGCTG 58 5756260 5769213 GTTTCCGGGAATTGTGCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 2 2 3 83 3R 6049760 6049887 TGGAGCACTTTATAGAGGCA 58 6049696 6049714 CGAATTCCGGGTAATGCAG 59 NA Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 3 2 2 119 3R 6522460 6522480 GCGCAATATCAAAGATTCCTG 58 6523384 6523402 GCCCTCTAGACTTGTAAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0082301,FBtr0300078 1 2 3 80 3R 6638915 6639198 GATGACGATCAGATCGTGGA 59 6638854 6638877 ATCCTCACAGAATATGGTATCCAG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 1 7 7 97 3R 6692601 6692619 TACGGTGAACAAGGAGGAG 58 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113219 3 1 3 115 3R 7029405 7029425 CCCGTAACGATATCAATCTCG 58 7029500 7032640 AAATGAACCCATTCTCACCAG 58 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 1 4 4 82 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 3 4 4 83 3R 7264083 7264160 CCAGAGTATCCTCAAGGAGG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 1 4 4 82 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 2 2 3 80 3R 7866654 7866732 TAGGTCGTCTTAGGAAAGGT 57 7866773 7866793 TATCTACTCTGTGAGTCTCGT 57 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 1 5 5 73 3R 8270798 8270816 TACCTCATGGTCACCTCTG 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0290335,FBtr0301943,FBtr0290334 2 3 4 84 3R 8344791 8344902 CTGGCGCATCTTTAAGGAG 58 8344725 8344743 CATGTGGACGCTGTTAAGG 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 1 2 2 81 3R 9514942 9514960 ATCGTAGAGTTCTCGCCTC 58 9515005 9515098 TCAGTAGCATACGCTCCAC 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 1 3 5 80 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522056 9522557 TCGTAGTTTGTATCTATCCGGA 58 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 2 2 5 114 3R 9522482 9522559 TTTCCGGATAGCTTTCACCA 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083027 1 1 3 121 3R 11015007 11015097 CAAGCTGAACAGCAGTCTG 59 11015182 11015200 TGCTAGCCTGTACCATGTG 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 3 5 6 124 3R 11024865 11024946 TACAGAGCAACTTGGACGT 59 11025032 11025052 GGTAAACGCATCGATAAAGGT 58 NA Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 3 2 2 80 3R 11056750 11056768 CCTTATACACCGCCAAAGG 58 11056810 11056896 AGTTTGTAATGGAGGTTTCGG 58 NA Nonspecific Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 3 2 2 60 3R 11092809 11092830 AAATCGACAAGCCCAATTACAG 59 11092770 11092789 AGGACCAGAACATTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 1 7 13 125 3R 11122321 11122339 AAATTCTTGAGAACCGCGC 59 11122428 11125014 CCAATTTACGGGCAACCTC 59 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 2 2 2 68 3R 11170611 11170629 CTTCATTGTGGTGTTGCAG 57 11170496 11170516 AAGTTTCGCAGTAAGAACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 1 2 2 91 3R 11249454 11249474 AGGTGAATGTCAAGTATGAGG 57 11249257 11249401 GTCCAGGTTCTTCTCTGTG 57 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 2 2 8 89 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782598 TAAATGCCAGAGCATCTTCG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 3 5 8 105 3R 11780833 11780853 GAATTACTTCTACCGCGTCTC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 2 1 1 60 3R 12307828 12307847 GCTCTTTATGACAGAGTGGG 58 12307731 12307749 CCGAATCCCTAGTTGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083350 1 1 6 104 3R 12536320 12558454 TATCGCAGGTAAGAGATACTCAG 59 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 1 3 4 80 3R 13301993 13302198 GCTATTACAACACGGAAGATGAG 59 13301935 13301953 TCTTTGAGTGTCCTGCCTG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 3 4 4 87 3R 14810829 14834235 TCACAGTTCCTGAAAGCGA 59 14834286 14834304 GTAAAGAGCTCCTGCTGGA 59 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0100549,FBtr0083749,FBtr0100548 1 3 4 84 3R 14985382 14985401 TCCATTCATCAACTTTCGGA 57 14982254 14985338 GGCAGCTATTCTGTAAATATCG 57 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301379 2 1 7 108 3R 15590037 15590055 CCTATACGAAGGCCATCGA 58 15590126 15590284 TATGTGGTTACTGATCGGGA 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 1 4 7 96 3R 15600341 15600359 ATATCGCGGATCACCTTCC 59 15600416 15600650 CTTAGAAGGTCTCATCCTCCTC 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302672 2 1 8 138 3R 16144744 16145299 ATAAGGCAACTGCTGATGC 58 16145401 16145419 GCCAGCACTATAACTGCAG 58 NA Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 3 2 2 80 3R 16435960 16435978 GAGTCTCAACTTCCGGGAG 59 16436020 16436126 ACATCTAGAGACATGGGACTG 58 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 1 3 3 80 3R 16562580 16562598 AAGTTCCCTAGATGGGAGG 57 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 2 5 8 87 3R 16624123 16631681 GTGAATACGTAGTCGGTAAACG 59 16631729 16631747 CCTATTAAACCGCTCGGGT 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255,FBtr0083959 1 2 8 86 3R 16628266 16631682 TTTACCAGTAGTCGGTAAACGT 59 16631729 16631747 CCTATTAAACCGCTCGGGT 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 2 3 3 82 3R 16678288 16678431 TTTGTTACAACAGGGAGGCA 59 16678225 16678243 CGATAACCACGATCCACCA 59 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 3 2 2 80 3R 16732087 16732106 GTTTCGCCAACTGTCTATGG 59 16732149 16732231 GAGTGGAGTAAGCCTTGGG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089515 3 1 9 114 3R 16792234 16792252 AACATTCCCGAAATCTCGC 58 16792330 16796617 AAATGGCCGGAATCATGTC 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 3 3 4 175 3R 16881621 16881701 AGTTTGTTAATGGACTGGGC 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0114361 2 1 22 143 3R 17180046 17200792 AGAGGCTCAAGCATTTCAC 58 17179921 17179941 CGCTCCTTGTAATAATTTCGG 57 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 2 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 2 3 3 81 3R 17447412 17448546 ATTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 2 2 3 101 3R 18372500 18372519 AGTACGACGATGAGTTGGTC 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 3 2 3 132 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542763 18542939 GGTAATGCATTTGGATACTGC 57 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 1 3 4 139 3R 19432760 19433254 CTGCTAGACTTCCACAATGG 58 19432640 19432658 ATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 2 3 4 140 3R 19432760 19433254 CTGCTAGACTTCCACAATGG 58 19432639 19432658 TATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 2 3 5 109 3R 19839345 19856230 CAATTGCATCCCAAGACTCTG 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 1 4 7 191 3R 19985468 19985486 CACAGGCGTCATAAATCGC 59 19985038 19985210 GTTATACGGGTAATGGGTAATGTG 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084556 2 1 4 192 3R 20047466 20048077 GGTCAAAGAGGTTAATATGTCGG 59 20048290 20048308 CTTTACCTCGTCCTCGGTG 59 NA Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 2 1 1 86 3R 20219025 20219044 CAAGGATACCATTAAGCGGC 59 20219154 20219172 GAACGACCATTGAAACCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696 1 1 2 161 3R 20618823 20618841 AGACGTCACCTATACCACC 58 20618966 20620054 TGACATTCACGTTGCAGAG 58 NA Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 3 2 2 80 3R 20749880 20749899 AGAGTCCTATTGAGGTTGCC 59 20749941 20750012 GCCGGTTATTGACATTGGTC 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 3 2 3 145 3R 20864228 20864384 GGAAACACAGCTAAATCGGTC 59 20864001 20864019 TTGAACGGCGGATATTGGA 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641 1 1 3 197 3R 21818959 21818977 GATTTGCTGGTCCCTTCAC 58 21819196 21820297 TTCATGCAGCTTTATCCGTG 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100 2 4 10 110 3R 22402355 22404452 ATCAGTGAGGAGGTTGTGC 59 22404526 22404544 GAATATGCCAGGCTCTCGA 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 2 2 3 119 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687903 22687922 GAGTTTACATTCCGTGGTGG 59 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882 1 1 2 177 3R 22750976 22761692 CAACGAAGCCATCATATCCT 57 22761831 22761850 TGGCGATGATAATGAAGCAG 58 NA Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085085 2 1 2 80 3R 22777614 22778737 AAGGATAACGCGGTACTCC 59 22777552 22777573 TGATAGAGGATATCCTGGTCCA 59 NA Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 2 1 1 60 3R 22825490 22825511 AACTAGGACGGATGTATTACGA 58 22825592 22825611 GGACGCATCAGACATATCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 1 2 3 84 3R 23058250 23058268 ACACGATAGTCTCACTGCG 59 23057911 23058202 TCTTCACATTCCTGCAGCT 59 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 2 3 3 82 3R 23081102 23081183 CATTATGCCTGTTAACATCACG 58 23081226 23081244 CAGGCACTTGTATGGTGAG 58 NA Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 3 1 1 60 3R 23305497 23305518 AAGGATCTAAAGTACCTCGACC 59 23305593 23305616 GTACAATGGTATAATGGCGTAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611 3 1 2 82 3R 23795435 23795454 TCTCTACGACATCTGCTTCC 59 23794904 23795390 ACATTGTGACGGAGACGAG 59 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 3 3 3 109 3R 24168518 24168607 ACGAGATACCAGAGGTATCG 58 24168679 24168697 ATCTTTGCCTCGATCACGA 59 NA InUTR Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 2 5 6 83 3R 24639656 24639675 TTACTGCTACGGATATTGGC 57 24639720 24640880 CGCTCAAACACCTTATAGCA 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085444 1 1 5 83 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423186 25430240 TCCATTGCCTTCACATGGT 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 1 4 4 165 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597 2 1 2 126 3R 25907930 25907948 CCGCTACAGATTTCTGGGA 59 25908036 25945863 CGGAATCGTCATCCTTATGAC 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 3 3 3 237 3R 25959301 25959319 CCAGAAGATCAAGGACTGG 57 25959021 25959039 CAGGAAGCCATCTATGTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 3 1 1 130 3R 26247246 26247265 GGAATGAAGGAGACAGGAGG 59 26247026 26247045 GACAAGTCGCTGTAATTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 2 5 5 82 3R 26289004 26289024 ATCTGCTCTATGACATCTCCA 58 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 2 2 2 81 3R 26332227 26332250 CTCATTCAGTGGACTTATTCACTG 59 26332289 26332361 CCAGCGATGTATTGTGATGG 59 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681,FBtr0085683 2 3 3 150 3R 26351986 26352004 GGACTTCTACGGTCTGCTC 59 26345477 26348959 CTTGGCCTCCTTTAACTGC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 3 2 13 82 3R 26421341 26421453 TCCAAACGCAGATTAGGCA 59 26421277 26421295 ATGACAATGTCCGAGGTGG 59 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085717 1 1 2 104 3R 26704770 26704869 CCCTATATTTGTGAAGTGTGCA 58 26704687 26704705 GAGTGGTGCAATGTTCGTG 59 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773 1 1 3 152 3R 27044762 27044842 CTTGATACAATAGCCGTGCG 59 27043631 27043649 CAATGGTCGCAAGTACTGC 59 NA InUTR Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 2 2 2 96 3R 27079869 27079887 GAGCCGAGTTACTTGTGGA 59 27079736 27079810 ATCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 3 2 2 80 3R 27386438 27386456 TGGATTCGGTTTACCAGGA 58 27386500 27386584 AAGAGTGGCATCTGTAGGG 58 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085815 1 1 2 144 3R 27438275 27438293 AAGGACGAATACTCAGCGG 59 27438399 27438617 CATCGCCAACATATTCAGAGG 59 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 3 2 4 98 3R 12571212 12571232 ACCAATATGCTTCGGTAATCG 58 12570413 12570433 CCAATGGGAAGTGATAATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 1 2 3 60 3R 17123342 17123362 ATAACTGGTGTTTATCAGCGG 58 17123384 17123402 CAATAGAAGCGACAGGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 3 1 1 60 3R 15212528 15212546 GTCATTGGTTCTCTGGTGC 58 15212651 15212671 CTGAGGTAGGAAGTAAACGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 1 1 1 82 3R 21094667 21094687 CAGAGAAATGGACATGTACCA 57 21094733 21094751 CTGCAAACATCTTTCGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 2 2 2 91 4 279986 280081 AGATGATCAGAATCCTCGCT 58 280133 280153 GGTCTTCCATAGTAACGTTCC 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 2 2 6 90 4 352620 363557 GCAAACACAATTGCGTGTG 59 352548 352568 GCGTAAGCTATGTAAGCTGTG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 1 2 9 98 4 1065789 1065810 CACTACTCTTGAAGACGATGAC 58 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 1 2 9 98 4 1065789 1065810 CACTACTCTTGAAGACGATGAC 58 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300379 2 1 9 84 4 1059053 1060646 CTCTTCAGCAGCTAGACGA 58 1058987 1059006 GTATCCATCAAAGTCGCCAC 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 3 5 8 94 4 1128885 1128905 CGATACGTCTATGCTTTACGA 57 1128961 1129108 AACCTGTTCCAATGGAAGG 57 NA Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 3 2 2 83 4 1140619 1140637 GCTCGCCTAGACTTATGTG 57 1139635 1140572 GTGCTTTGTCTTAAGGGCT 58 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 1 4 4 121 U 1092307 1092326 CCAGATCTAAGTTGCGATCC 58 1092152 1092226 TAAAGAGAATTCACTGCTCGAC 58 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 3 4 4 122 U 1092306 1092326 CCAGATCTAAGTTGCGATCCT 59 1092151 1092226 GTAAAGAGAATTCACTGCTCGAC 59 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 1 2 3 80 X 31081 31100 CATATTACGCACCATTTCGC 58 31143 32455 GCCGAAACTAAGTTCTTGC 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0290017 1 2 8 172 X 395000 396028 CTTGTTTGGAAGGCAACTG 57 396162 396182 GCTAACGATCCAATTTACCAG 57 NA Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929 1 1 2 80 X 477101 487692 ATGTCTACGACTTATTCGATGC 58 487731 487751 CCTCCAAATTCAAGATGTCCG 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 3 2 4 87 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516381 516475 AAGAAGCTCCCTGATATGCT 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 3 5 6 87 X 640137 640556 CAAAGAAGCGAGACGACTC 58 640606 640625 AGTATGTGATAGCTGACCGT 58 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968 1 2 3 80 X 1127840 1127858 CGGACAGTGATGTTTACCT 57 1120306 1120887 TGACCAGACTTTGCAACTC 58 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 2 4 5 88 X 1787492 1787510 CATATGAGGGCCTGTACGG 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 3 2 3 81 X 1821880 1821898 GAACCTTCGTCATCAACGA 57 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 1 3 3 87 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678712 2679045 CAGGATTATCTGCAAATAGCGG 59 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 2 4 4 178 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816600 2816618 GTTGAATCCAGGTCCACCT 59 NA Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070907 3 1 2 64 X 6246486 6246504 TTTCCGCACGGAAATTGTC 59 6252951 6252970 GATCATGCGAACATAGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 2 3 6 154 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680836 6681393 GACACGAAACTGTAGCTGAC 59 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0071042 1 1 2 80 X 6735553 6735571 TTTGCCTGGAGGATCTGAG 59 6734457 6735509 GGTCGATGCATCCTTTGTG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 1 4 21 110 X 6981688 6986743 TTTAAGATGGCGAGTGGTG 57 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071095,FBtr0071094 1 2 2 123 X 7828194 7828212 ATGTCACTGATCTGTCCGG 59 7828299 7828376 TTCTCAGCCACATCCTGAG 59 NA Nonspecific Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 2 2 2 80 X 8977448 8977466 GCCTCATTTACGAGGACGA 59 8977506 8977586 ATGTGTAAGTTCCTAGGTTCTCC 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 2 3 5 93 X 8994610 8994630 AAGGGCGAGATAAATTTCCTC 58 8992438 8994557 TGTCCTGATCTAGATGGATGC 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112753 1 1 3 80 X 9227646 9230966 TACAGTAAGCTATCGCCCG 59 9227584 9227602 TTCACAGTCCTGACTCTGG 58 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 2 2 3 84 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859793 9859880 CAATGTCTAGGAATCGAGATGC 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 1 2 3 95 X 10639931 10639949 AAGAGTACCACCGGATTCG 59 10640006 10640118 GAGAAAGTCGTTGTAGGTGAG 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112813 2 1 15 81 X 11296750 11296768 CTACAGGGTGGAGTTACCC 58 11296812 11299317 CTCCTCGGAAGGATAGTCAG 58 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 2 4 4 140 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698360 11698378 GTCAACTGATTCTTGGCGG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 1 2 10 87 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848304 11856054 ATTGAGTTCGAATCGTGCC 58 NA Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 2 2 2 129 X 11885108 11885126 AATCGATCGACACAAGGAC 57 11884926 11885015 GATCTTGTCGCCAGATGAG 58 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 1 3 3 80 X 12604746 12604845 GCATTCGGATGTTAGTGAATCC 59 12604687 12604706 ATAGCTGACGTTGCATTTCC 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 83 X 13268113 13268132 CATTCAACCGTTAGACGTCC 59 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 1 2 2 80 X 13580652 13580672 GCGGACATTAATCCTATTGGT 58 13580526 13580612 CAGGTTGAATTTATCCTTGGC 57 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 3 3 3 80 X 14143264 14143282 CGTGAAGCTAACCGAAGAG 58 14143326 14143421 AGGCATCCCTTCATATGCT 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 3 2 8 122 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820887 14824780 CCCAATATGGCTCTCAAATGTC 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 2 4 4 108 X 15229292 15229393 ATTCCAGAATGCTGTCAACAG 59 15229463 15229481 CTCGTAGTGCTCCTTGTCC 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 1 2 2 80 X 15686482 15686563 TTCTTGAAGAACAAGGCATCAC 59 15686604 15686622 TCTGAACTTCTCGAGCTCC 58 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 3 5 5 166 X 15688455 15688538 AGATCCACGTAACAAAGTTCC 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 1 5 5 167 X 15688455 15688539 AAGATCCACGTAACAAAGTTCC 59 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 3 4 9 119 X 15714518 15714536 CAAGTCAGTTCGCACATCC 59 15717249 15717335 ATCATAGAAATCTTGGGACGTG 58 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 3 3 3 83 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965135 15965154 GTGCTTGCGATAGTTGATGG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 1 6 9 185 X 16270362 16270692 CAGTGGTATCTGAATGGCG 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 2 5 5 109 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276866 16276946 ACAAAGTTGTGCAAGTCCT 57 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 1 3 3 83 X 16310693 16310711 GAAGAGTCCAAGCAGTACG 58 16310758 16310836 TATATCCAGCCGTAGAGCA 57 NA Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 1 2 2 97 X 16483581 16483673 ATGAGATAGATCAGGCGCT 58 16483502 16483522 GAACGTTGTCGTAATGAACTG 58 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 3 2 2 114 X 16554496 16554581 CAGTTTCAAGCACAAGATGGA 59 16554657 16554675 ATTAACTCCGTGTTCGGCA 59 NA Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 2 2 2 105 X 16721787 16721805 CATCTGCGGTTATGTCACG 59 16721630 16721719 GGAGTTGATATGTGGCATGG 58 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0074413 3 2 3 94 X 16867147 16867166 CACGTCTACAAGACGATGGA 59 16867009 16867090 ATGTCGCTGAGGAACAGAC 59 NA Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 2 1 1 71 X 17107050 17107069 TCTTTGTCGCAATGATACCA 57 17107276 17107295 GACCATGTATACAGGGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 2 2 2 82 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492355 17492375 GTTCTGTATTGTCATCGCCTC 59 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 2 3 8 98 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824461 17824628 AAATGTTGACCTAGTGCACC 58 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 2 7 9 72 X 18267444 18267465 CGTACAATAAGATCTTCACCGA 58 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 1 1 2 78 X 18642098 18642116 TTCATGGGAGAAGATTGCC 57 18641945 18641963 TCGATCAACGTAGTAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 3 2 2 107 X 20127882 20127900 CAGAGCCTGTGTTCTTCGA 59 20127050 20127812 CATAGCCACCATTGATCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 1 2 3 80 X 20543398 20547860 GATTTAAAGACATCGCAAGTCC 58 20543339 20543359 CTTCCAGGAATATTCCGAAGC 58 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 3 3 3 84 X 20804407 20804427 CCAATTTGAGAATGGTCAGGA 58 20804253 20804272 CAAATAACCGTTGGCAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 3 5 5 80 X 21228145 21228163 AGGAGAGCTACAATGTGGT 58 21228206 21228294 TGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 1 5 8 82 X 21247629 21247647 TAATACGCGCCTATCTCGT 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 2 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524 2 1 5 101 X 21907202 21907448 TGTCAATGGAAGGGTTCGA 59 21907513 21907531 AATAGCAACTCTCCAGGCG 59 NA Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337 2 1 2 109 X 375535 375642 AGGAGTAGATTGTCTGCCC 58 375444 375463 GATAGCATCTGATCAGGCTG 58 NA Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 2 1 1 152 XHet 62088 62108 CGGGACTATAACATGCAATCC 59 62545 62563 TCGTGGACTTTGACTACGG 59 NA DesignNoJunction Drosophila melanogaster 61 snmRNA:430:CR33734 FBgn0053734 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:35Bd FBgn0028882 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-305 FBgn0067700 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-310 FBgn0067694 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32200 FBgn0052200 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V4:89BC FBgn0012011 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG10597 FBgn0030832 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135c FBgn0083010 FBtr0113573 2 1 1 62 X 17040397 17040415 CCTCAATGCCAGTTGATGG 58 17040353 17040377 CCTATGAGTCCATTAAGAGTTATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903,FBtr0111134 1 2 2 60 X 22414669 22414688 TGAATATTTGGGACACGGCT 59 22414628 22414647 CGATAGTAGATGGGTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 1 4 4 98 X 21313519 21313538 GATTAGGAACGGGAACTGGT 59 21312773 21313461 CGGTAAGATCAATGCAGTTACC 59 NA Drosophila melanogaster 61 CG1801 FBgn0031171 FBtr0300938 3 1 1 80 X 21179298 21179319 GCCATGGATTCTATCTAGAGGT 59 21179166 21179260 CATCCTTACGCAAATTCTCCTC 59 NA Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 3 1 1 81 X 21027661 21028076 GAACGATTAACGCTCCTCTG 58 21027599 21027617 TAGTAGGCTCCATTGTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15456 FBgn0040650 FBtr0077323 1 1 1 97 X 20297934 20298009 AGTGGAGGTGGAATACTGC 59 20297855 20297873 AGGATATGTCCAAGTCGGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Bap FBgn0010380 FBtr0074789 1 1 1 80 X 19625114 19625419 ATTTGAAAGTACGCAGCTAGG 58 19625461 19625479 AAGATCTCGCCCTTCTTGG 59 NA InUTR Drosophila melanogaster 61 CG12788 FBgn0031041 FBtr0100291 3 1 1 60 X 19512468 19512486 CTAGCTAAACGCAACTTGC 57 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074720 1 1 8 155 X 19400258 19400521 TTGTAGCTACCTCCAGCAG 58 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA InUTR Drosophila melanogaster 61 CG32533 FBgn0052533 FBtr0074786 1 1 1 90 X 19370372 19370458 GTTGCTCTGTTACCAGTCG 58 19370300 19370318 GAAGAGCAATAGCGTCTGG 58 NA Drosophila melanogaster 61 CG8010 FBgn0031008 FBtr0074688 3 1 1 225 X 19161279 19161364 GAGAAGTATTACAGGCACCG 58 19161073 19161091 GGAGCTCTTGATCCTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 3 3 3 90 X 18316518 18317538 GCATTCAAGGTTATCCTCTCC 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508,FBtr0112999 2 2 2 100 X 17940255 17940341 TGGTTACCTTGCAATTGCC 59 17940405 17940423 ATCGGCTAGCTCCATTTCC 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0300976,FBtr0300979,FBtr0300975,FBtr0089800,FBtr0300977 2 6 6 91 X 17794326 17794655 GACTCGTTGAATTTCGCCC 59 17794710 17794728 TTGATGATCGGCTGTAGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 unc-4 FBgn0024184 FBtr0074460 1 1 1 212 X 17663630 17663648 GGATCTAATGAGGATGGCG 57 17670305 17670463 ATTCTGGAACCATACCGCA 59 NA DesignRelaxed Drosophila melanogaster 61 xmas-1 FBgn0016080 FBtr0074405 2 1 1 83 X 17046954 17047151 GAGATGCCAGATGGTTTGG 58 17046889 17046908 GGCATTCGTACCTTATTGCT 58 NA Drosophila melanogaster 61 CG13010 FBgn0030770 FBtr0074373 2 1 1 135 X 16572621 16572639 GATAATGCGGAGCAACCTC 58 16572504 16572522 TGCTCATGCCAAAGTATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 1 3 3 124 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 U2af50 FBgn0005411 FBtr0074234 1 1 1 80 X 16251444 16251531 CTGAATGACGATCAGGTTAAGG 59 16251385 16251403 AGTAGCGGCATCCTTAACC 59 NA Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 3 2 2 195 X 15837144 15837162 ATCTAAGGCCACCTCTACG 58 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 AlkB FBgn0065035 FBtr0074168 2 1 1 89 X 15753251 15753271 CGATGATTGTGTAGTCAAGGG 58 15753131 15753150 TGTAGGCTTTCTACATTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 3 3 3 99 X 15744651 15744669 GTAACCTTAGGAGCACTGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 1 2 2 112 X 15743034 15743176 GGAATTACCTACATCCAATACTCC 58 15742945 15742963 GTGAACTTCACATGGCTCG 59 NA Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074201 1 1 2 98 X 15638917 15638935 AACATCAGTACGCTGTGGT 59 15638448 15638857 GGAGGTTTCCTTAACAACAGC 59 NA Drosophila melanogaster 61 CG15646 FBgn0030665 FBtr0074062 3 1 1 158 X 15563279 15563297 AACTCGTATCTGGCCAAGG 59 15563139 15563157 CACTCCGATCGACTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sog FBgn0003463 FBtr0074063 3 1 1 130 X 15507294 15507312 ATGCGATGATCCCATCTCG 59 15501831 15502018 CAGCGTAATGTTTCATGTTGC 59 NA Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021 2 1 2 65 X 15165877 15166028 TATATTCAGATATCCCGAACCG 57 15165833 15165851 AAGAGGTGGACGGATTCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026,FBtr0112984 3 2 2 82 X 15039445 15039463 CGAGATGATAGGACGAGCT 58 15039308 15039399 ACTCCACAATCTCACAACG 57 NA Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 1 2 2 80 X 14892104 14892124 GAACGAGTGATGGACTATGTC 58 14892161 14893908 CGGACAATAGTTTAGTACCTTCTC 58 NA Drosophila melanogaster 61 mRpS25 FBgn0030572 FBtr0073945 1 1 1 60 X 14476800 14476818 ACATATGGTGCTCATCACG 57 14476695 14476713 GGATCTGCGGTATGTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 mRNA-capping-enzyme FBgn0030556 FBtr0073922 3 1 1 84 X 14136466 14136484 ACTTTCACGACAAGATGCC 58 14136336 14136418 CCCAGTTTCACCTTTAGCG 58 NA Drosophila melanogaster 61 CG32603 FBgn0052603 FBtr0073894 1 1 1 98 X 14078622 14078745 CAGCAACATGAAATTCTTCGC 59 14078805 14078823 GATTTGGGAGGCAGGTAGG 59 NA InUTR Drosophila melanogaster 61 CG11071 FBgn0030532 FBtr0073829 2 1 1 68 X 13751051 13751069 CCAGAATTCTCAGCCTGCT 59 13750779 13751019 GTAGTCCACGTGTCCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 l(1)dd4 FBgn0001612 FBtr0073841 1 1 1 80 X 13636400 13636418 AGAGAAATCTGCGAGGAGC 59 13636264 13636359 GATTTGAGAGGCACTAGATTCC 58 NA Drosophila melanogaster 61 CG32635 FBgn0052635 FBtr0073780 3 1 1 82 X 13390166 13390185 CAAGAATGAGCTGTACAGCC 59 13390230 13393839 CCTTTGGCGCTGTTATCAC 59 NA Drosophila melanogaster 61 CG4332 FBgn0030456 FBtr0073726 3 1 1 98 X 13049934 13049954 CTACCAAGGATATTGACGAGG 57 13050014 13050111 CGAAGAGCATATGGATGCT 57 NA Drosophila melanogaster 61 CG4351 FBgn0030448 FBtr0073746 2 1 1 81 X 12992407 12992478 TACTCCAAGCACCATCTGG 59 12992344 12992362 TACTCCCATTGGCAATCCG 59 NA Drosophila melanogaster 61 CG2200 FBgn0030447 FBtr0073721 1 1 1 118 X 12988697 12988815 TCTTCAAGAGTGCCAATGTG 58 12988896 12988914 TCCCTCCACATTGAATCCC 59 NA Drosophila melanogaster 61 CG2543 FBgn0030407 FBtr0073655 3 1 1 88 X 12508806 12508824 ATTACATCTGGACGGAGCT 58 12508876 12508960 TTGGATTGACACTGTCTCG 57 NA Drosophila melanogaster 61 CG15729 FBgn0030399 FBtr0073664 2 1 1 150 X 12459170 12459189 AATCCCTTAGCCAACATGTC 58 12458716 12459058 CCCGAGGAAGACATATTGTC 57 NA Drosophila melanogaster 61 CG15731 FBgn0030390 FBtr0073670 3 1 1 128 X 12351534 12351729 CCAGCAATGAAGATCTTTGTG 57 12351426 12351444 GTGGATCACCTGGATGGTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 1 3 3 80 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346755 12346775 ATTAGCATTTCGTAGAGCAGC 58 NA Drosophila melanogaster 61 CG32652 FBgn0052652 FBtr0073671 3 1 1 91 X 12305614 12305689 CAAGCTAGGATAGTTGAAATGG 57 12305544 12305562 AAGCGCAACATTTGTATCC 57 NA Drosophila melanogaster 61 CG12721 FBgn0030373 FBtr0073637 3 1 1 60 X 11966650 11966668 CGATGTGCCAAACCTAACG 59 11966608 11966626 CCATCTAGATTGCAGGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9360 FBgn0030332 FBtr0073613 3 1 1 88 X 11658000 11658018 CATCGAAGTACGCAGTCAC 58 11657848 11657950 ACTGATGCTCGTAATCTTGGT 59 NA Drosophila melanogaster 61 inaF-A FBgn0085351 FBtr0112524 1 1 1 146 X 11627704 11627723 ATTCATCTCAAGTTTCCCGT 57 11621345 11621363 TTCCGATGAGTTCAGGAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1756 FBgn0030303 FBtr0073502 2 1 1 81 X 11369553 11369627 ATTTGGTGCCAAAGAAACCC 59 11369671 11369689 ATGATGGTCGATGTCAGGG 59 NA Drosophila melanogaster 61 l(1)10Bb FBgn0001491 FBtr0073460 2 1 1 83 X 11219151 11219169 TGATCGAACCAACTCTCGA 58 11219005 11219023 ATTCCGTAATGCGTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1908 FBgn0030274 FBtr0073440 2 1 1 195 X 11045981 11045999 ACTCGAAGAGGACGTACAC 58 11046158 11046286 TACATCGCTTCGGTTTCCA 59 NA Drosophila melanogaster 61 sev FBgn0003366 FBtr0073393 2 1 1 92 X 10972708 10972729 GGTTTAACTTAGCCGATTACGA 58 10972571 10972657 CAAATCGGAACCTGTATTGTG 57 NA Drosophila melanogaster 61 CG1582 FBgn0030246 FBtr0073403 2 1 1 83 X 10789600 10789686 ACTAACAGGTGTGGAGCAG 59 10789535 10789553 ATGTTTGGATAGAGGGCGG 59 NA Drosophila melanogaster 61 CG2186 FBgn0030243 FBtr0073381 1 1 1 85 X 10751961 10752333 GACATTAACGATGACCTGCTC 59 10752380 10752398 AGCAACTCATCCTCATCGG 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 2 2 10 81 X 10692592 10692667 TCTCTACGAATAAGGGTGAACTC 59 10692533 10692553 CGTCCAATCAAATTGTTGTGG 58 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 2 3 3 85 X 10641029 10641047 CAACTCCGTCTACCAGGTG 59 10641096 10641527 GTGTTACCACATTGCCACC 59 NA Drosophila melanogaster 61 CG32687 FBgn0052687 FBtr0071458 3 1 1 120 X 10377581 10379751 ATGCAAAGTCTGCATGTGC 59 10377479 10377500 GCAGAATCTCGATCAGATTGTC 59 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 1 2 2 108 X 9873643 9873812 CATACTTTCTGAGGCTCATGAC 59 9873556 9873574 GAGTTCCGAAGAGTTGGGT 59 NA Drosophila melanogaster 61 CG15250 FBgn0030165 FBtr0071428 2 1 1 79 X 9861075 9861096 GGTCACCAATATCTCAAAGTCG 59 9860857 9860875 TAAAGAAGAGCACGAAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 3 2 2 185 X 9823082 9823214 AACTCTTCGCTGTTCTTCG 58 9822915 9822933 TCCGGTCCAGTATTTCACC 59 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367,FBtr0071366 3 2 2 133 X 9501593 9501672 TCCGTGCCAAGATCATCTC 59 9501478 9501496 GAGGTCATTGTGATGCGTC 59 NA Drosophila melanogaster 61 CG32708 FBgn0052708 FBtr0071286 3 1 1 64 X 8980337 8980433 CAGAGAAGCTGTCAAGTGC 58 8980458 8980479 GGTGAAGTGGATATTATAACGC 57 NA DesignRelaxed Drosophila melanogaster 61 Gbeta5 FBgn0030011 FBtr0071189 3 1 1 60 X 8045308 8045328 CAAGGAGAGCATCATCTTTGG 59 8045268 8045288 CAGTAATCTTCCACTGACCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10959 FBgn0030010 FBtr0071157 2 1 1 81 X 8043454 8043472 ATCCGCAAGACTATCAACC 57 8043585 8043603 TTGTAGTCCTTTGGTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 3 2 2 106 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997744 7997829 CGGAATCCTGCTTGTAATCC 58 NA Drosophila melanogaster 61 dpr14 FBgn0029974 FBtr0071134 3 1 1 82 X 7800330 7800348 CCTCCTATATCACCTGGCG 59 7800199 7800284 CATGTCCGTCTTGACACTG 58 NA Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 3 2 2 83 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632463 7632483 CGAGAGGGTGTAATCACTACC 59 NA Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 1 2 2 81 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632462 7632481 AGAGGGTGTAATCACTACCG 58 NA Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 2 2 2 80 X 7582353 7582433 GCATGTGCTTTCTACACCA 58 7582291 7582309 GCATAATAAGTTCCCGGCA 58 NA Drosophila melanogaster 61 CG42246 FBgn0259098 FBtr0299508 1 1 1 122 X 7305736 7305817 TCCAAATGACACTTGCACTG 59 7305633 7305655 TCGTATCTCTGGTATAACCAGTC 59 NA Drosophila melanogaster 61 unc-119 FBgn0025549 FBtr0071066 1 1 1 111 X 7183621 7183640 GCCTGCTAAAGACGTTTGAC 59 7183288 7183547 ATCTCAGCAACTAGGTCGG 58 NA Drosophila melanogaster 61 CG1677 FBgn0029941 FBtr0089712 1 1 1 95 X 7175917 7175935 GTCGGGATCAAGAGAAACG 58 7175767 7175858 GTTGATTGTTCAGCTGGCT 58 NA Drosophila melanogaster 61 COQ7 FBgn0029502 FBtr0070963 3 1 1 185 X 6665398 6666272 TAGCAATGAATGGAATGCTGAG 59 6666415 6666436 CATGATCGACGCGTATAATCTC 59 NA InUTR Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 Spat FBgn0014031 FBtr0070913 3 1 1 80 X 6424399 6424417 TGAACACGATTAAGGTGCC 58 6424459 6424547 TAATCTCAACGCTGTACTTGC 58 NA Drosophila melanogaster 61 CG33669 FBgn0053669 FBtr0302419 3 1 1 68 X 6294000 6294077 TTGACTACTCCGAAGCGAG 59 6293950 6293968 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 PpV FBgn0003139 FBtr0070921 3 1 1 109 X 6266761 6266779 AGCTATGCGAGATGGTCTG 59 6266582 6266688 CTCCAGGTCGTAGAACTGG 59 NA Drosophila melanogaster 61 Spx FBgn0015818 FBtr0070894 1 1 1 95 X 6149976 6150068 AGATGCCACCATCTATGCC 59 6150127 6150203 TGTACGTTCACCACTGGTC 59 NA Drosophila melanogaster 61 CG14446 FBgn0029850 FBtr0070876 2 1 1 82 X 6122148 6122171 GTTTACATATCCGATTTCCGTCTC 59 6122208 6122291 GACTGCTTGTTGTGTAGATAGTG 59 NA Drosophila melanogaster 61 Grip FBgn0029830 FBtr0070865 1 1 1 81 X 5876619 5876795 TCGATAATGTCTCACTGATTGG 58 5876837 5876855 GTGTAGCCGGAAACATGAC 58 NA Drosophila melanogaster 61 CG16721 FBgn0029820 FBtr0070821 3 1 1 93 X 5775270 5775289 AGAATTTGCGCAACATGGAG 59 5775345 5775427 CCCTCCAAACTATCCGAGG 59 NA Drosophila melanogaster 61 CG15773 FBgn0029795 FBtr0070806 1 1 1 172 X 5627734 5627951 TTCCTGCGAGCAAGATACC 59 5628087 5628105 AACGGTAACAGCTACGGAC 59 NA Drosophila melanogaster 61 CG16756 FBgn0029765 FBtr0070776 3 1 1 97 X 5321714 5321850 CTCTCGAATTGGATTTGTTTGC 58 5321908 5321926 TGGAACAGCCCATAGTTCC 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 1 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 CG6927 FBgn0029733 FBtr0070721 3 1 1 84 X 4801373 4801391 ACCTGAGAAACTCGCTCTG 59 4801493 4801511 ATGTCCTTCTCCGTGAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299602,FBtr0299601 1 2 2 60 X 4676688 4676709 CCCAATATCTGCAACTGTAGTC 59 4676649 4676668 CGGTGATCGAATGTCTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tip60 FBgn0026080 FBtr0070668 1 1 1 168 X 4010568 4010642 CTATGTGGACTTCAACAAGCG 59 4010420 4010438 TGATGTAGGCCGAGAAACG 59 NA Nonspecific Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 3 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290005 1 1 2 116 X 3453210 3453229 CTCATCATTCGAGTATCGGG 57 3453308 3463861 ATTTATCGAAGGCGTCCTC 57 NA InUTR Drosophila melanogaster 61 Gas8 FBgn0029667 FBtr0070589 1 1 1 132 X 3386463 3386556 GAGAAACTGCTAGAGCAGC 58 3386349 3386369 CCTCTACCTCGAACATTTGTG 58 NA Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0113325 3 1 2 187 X 2784837 2784855 CTATCCACCTGTCCACCTG 59 2787342 2787361 GTAGCGATAGAAGGTCATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Csat FBgn0024994 FBtr0273276,FBtr0070501 3 2 2 143 X 2597412 2597432 AATACGCTGAAGTACATCAGC 58 2596777 2596796 GATCAGTTTGGCGAACTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Csat FBgn0024994 FBtr0273276,FBtr0070501 1 2 2 142 X 2597412 2597432 AATACGCTGAAGTACATCAGC 58 2596778 2596796 ATCAGTTTGGCGAACTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Bzd FBgn0011566 FBtr0070447 2 1 1 96 X 2502129 2502214 TCTCATGTCCCATTACGCC 59 2502051 2502069 ACTCTCGGCCATCATATCG 59 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440 3 1 2 109 X 2486373 2489771 GCGATTATGAAATGTCTGACCA 59 2489841 2489859 TCCTCTTCAGCTGTTGGTG 59 NA InUTR Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302447 1 1 4 81 X 2475136 2477033 CCGTTTCAAGATCTTCTTTACC 57 2477074 2477093 TGCAATCATCTTGTACTCCA 57 NA InUTR Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 1 2 2 105 X 2342607 2342625 GGGACAAGATCGTCAAGGA 59 2342694 2342833 TACTGTTTGCGGAGTCTGG 59 NA Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300878,FBtr0300879 3 3 3 203 X 2278537 2278893 TGTACATGTGATTCGCTGTC 58 2278353 2278371 AATCGCTGATCGAAGTACG 57 NA DesignRelaxed Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 2 2 2 80 X 2160700 2160866 GCAGTACAAGCAAGAAGGA 57 2160638 2160658 AGTCTTGTCTCTGACTTTGAC 57 NA Drosophila melanogaster 61 bcn92 FBgn0013432 FBtr0070431 2 1 1 185 X 2043363 2043442 AACTTCAGAATGTACGCTGC 59 2042820 2042843 GGTCTTCTTGTTCTCTATAACCAG 58 NA Drosophila melanogaster 61 moody FBgn0025631 FBtr0070341 3 1 1 82 X 1941137 1941155 CAACCTGTTGACCGTAGTG 58 1941006 1941096 CAATACAGAGGCTGATGATAAAGG 59 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 1 3 3 86 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862013 1870613 CTGGCATGTCACATTCACC 59 NA InUTR Drosophila melanogaster 61 CG3587 FBgn0023521 FBtr0070321 2 1 1 143 X 1835081 1835166 ACTTATAATGCACCGCTGG 58 1835273 1835291 CTTCACGGGATTTCTGCTC 58 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 2 3 3 96 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800184 1800204 ACAGCAGATAAAGGTACTTGC 58 NA Drosophila melanogaster 61 CG14806 FBgn0029594 FBtr0070313 1 1 1 120 X 1774644 1774721 TTTCCAGTTCAGCCTACCG 59 1774805 1774823 ATAGTCGCACTTCACCGTC 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 1 3 3 80 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 1 2 4 180 X 516160 516242 CCAGGTGGAGATTATATCAAGAG 58 516382 516487 AGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 CR40959 FBgn0085777 FBtr0114228 1 1 1 60 U 5913931 5913949 ATGTAAGTTGAGCCGTACC 57 5913970 5913991 CCATTTAAGAAGCTAGTGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42414 FBgn0259845 FBtr0300136 1 1 1 60 U 6754416 6754435 ACTTAAATCGCCCAAGTCAC 58 6754375 6754393 CGAGGAGGATGACTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40629 FBgn0085505 FBtr0302349 3 1 1 60 U 2572633 2572653 CGATGAGGATAAGTGTTACGG 58 2572672 2572693 ACTTTAGGCGCATATCAATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111046,FBtr0111045 3 2 3 60 4 996136 996158 CCACTTTAAGATTCCTGTAGTGG 58 996175 996196 TTACTTACAGATGGAGAAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 3 1 1 81 4 488299 488377 TTGCATGTGTTGGGTATATGTC 59 488417 488437 GGTCAGATCAATGTTGATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Actbeta FBgn0024913 FBtr0089209 3 1 1 87 4 1099253 1099273 GGAGCAAATAAACCACATCAC 57 1099133 1099206 CCTTATCTATTCCCTTCTCCG 57 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 1 4 4 80 4 738484 738502 TGACTGACAGCCCTAACAG 59 738544 739908 TAATGGTACTGACTGAGGGAC 58 NA Drosophila melanogaster 61 CG11360 FBgn0039920 FBtr0089091 1 1 1 76 4 701737 701756 GTAGCAGAAATAGTGGGCAG 58 705237 705258 GGTGTCTTAATGTAAGTGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462,FBtr0113463 2 2 3 80 4 270465 270487 GGGATTCTGGAAACTATACATGC 59 270353 270426 GCTGCTCACCAGTTAATACG 59 NA Drosophila melanogaster 61 CG31204 FBgn0051204 FBtr0085814 1 1 1 60 3R 27218462 27218481 GAGTTCTTTACGAGCTTGCC 59 27218421 27218439 AGCAATCGTTCATCAGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9717 FBgn0039789 FBtr0085679 2 1 1 85 3R 26410848 26410866 CATCGGCATCAATGTGGTC 59 26410590 26410799 TCAGACCAGTAGTTGTCGC 59 NA Drosophila melanogaster 61 CG34155 FBgn0083991 FBtr0111047 1 1 1 143 3R 26382662 26385709 AGCATAAATTGCTGGTACCAC 59 26382539 26382557 ACTCCAGATGTCATGGCTC 59 NA InUTR Drosophila melanogaster 61 CG9698 FBgn0039784 FBtr0085657 3 1 1 92 3R 26340929 26341001 CTTCAACAGGCGAGAAACC 59 26341057 26341075 CATCAATGGCTCCTTCGAG 58 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085692,FBtr0085694,FBtr0085693 1 4 4 80 3R 26274283 26274371 GACAATCTAGTTTCGGTAACTGAG 59 26274226 26274244 CATGTTGTTCAGCAGCGAG 59 NA Drosophila melanogaster 61 CG15535 FBgn0039764 FBtr0085629 1 1 1 77 3R 26249334 26249355 CCAAATAAACCGGAAATTCGGA 59 26249278 26249296 TCTAACTTTCTCCCGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 2 2 2 80 3R 25948595 25948614 TTGGGTCTGGATTATCTGGT 58 25948475 25948553 TACAACTAATGGCTTCGGTG 58 NA Drosophila melanogaster 61 ocn FBgn0041102 FBtr0085599 3 1 1 81 3R 25863210 25863228 TGATGATTCACATGCACGG 58 25863093 25863165 AAGATTTCCTCGTGGTCCT 58 NA Drosophila melanogaster 61 CG42558 FBgn0260760 FBtr0301257 2 1 1 60 3R 25759804 25759971 GGCAATTTAATGCCAGCGA 59 25759993 25760013 ATCCTAAACTGATCGTCGAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7789 FBgn0039698 FBtr0085483 2 1 1 198 3R 25629391 25629473 AGTATACACAGGGACACGT 57 25629635 25629653 GTTATGATGAACTGGCCGG 58 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 2 2 2 128 3R 25323834 25323855 GGGCCTGCTTAAGTTTATACAG 59 25323943 25324030 ACAATGATCTTGCAGTTGCC 59 NA Drosophila melanogaster 61 CG14062 FBgn0039592 FBtr0100373 3 1 1 80 3R 24468038 24468126 AGCCCTTCTATATCACCCG 58 24467976 24467995 CCGTATAGCTAGCTTCATCC 57 NA Drosophila melanogaster 61 CG4815 FBgn0039568 FBtr0085260 1 1 1 60 3R 23815865 23815883 TTGAGGAGCAAGTACATCG 57 23815823 23815842 TATCCCTTGGATGCAGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31053 FBgn0051053 FBtr0085268 3 1 1 60 3R 23753852 23753871 GAATCCACTGCAACAAATGC 58 23753811 23753830 ATGTGGAAGATCAACGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12885 FBgn0039523 FBtr0085185 1 1 1 60 3R 23356799 23357017 ATGATGAAGCTGCAATACCA 57 23357039 23357058 ATCGCAATGTTTGATTCTGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6295 FBgn0039471 FBtr0085077 2 1 1 67 3R 22832732 22832750 GATGAAACTGTTCCTGGCC 58 22832617 22832635 CATTCACACGAACCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 1 3 3 81 3R 22545020 22545096 GTTTCTTCATGCTCCGCAC 59 22545141 22545159 TCGTAGTTGATGGCTCCAC 59 NA Drosophila melanogaster 61 Mst57Dc FBgn0011670 FBtr0084916 3 1 1 60 3R 21655250 21655269 GCCAATAGTTAAGTCCAGGA 57 21655209 21655230 CGCGCTAACATATTGATTACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11854 FBgn0039299 FBtr0084811 3 1 1 93 3R 21068290 21068308 AGTCAGAGGACCCTACTCG 59 21068363 21068445 TACCTTTGTTCTAGTGAGGCG 59 NA Drosophila melanogaster 61 Osbp FBgn0020626 FBtr0084801 1 1 1 94 3R 20761858 20761984 ACGTTCAAATCAATCCCTTGG 59 20761784 20761802 GTTGTTCACCGTTGTGGTC 59 NA Drosophila melanogaster 61 CG31381 FBgn0043799 FBtr0084711 3 1 1 60 3R 20704022 20704043 GAACTAAAGTTAGTCACTCGCC 59 20704061 20704082 ATCGATTGTTGATCCACTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp95EF FBgn0002863 FBtr0084561 1 1 1 62 3R 20054704 20054723 GGATATCAACATGGCCTCAG 58 20054810 20054828 AGGGATAGAGCTACAACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 6 6 80 3R 20025044 20025063 CTAAGACTATGTCCGAGCTG 57 20024922 20025002 TGATCAGCGTAAACTTGGAC 58 NA Drosophila melanogaster 61 CG10252 FBgn0039104 FBtr0084475 1 1 1 80 3R 19521636 19521654 ACAAGTTGACTCGCTATGG 57 19521514 19521592 TGCTTCGCTTATCGATGAC 58 NA Drosophila melanogaster 61 CG4434 FBgn0039071 FBtr0084382 1 1 1 81 3R 19114369 19114391 CATCCGAGCTTATTATCGAACTG 59 19114249 19114333 CATATGTTCGGTAGTTGACTATCG 59 NA Drosophila melanogaster 61 Takl2 FBgn0039015 FBtr0302204 2 1 1 80 3R 18558618 18558637 TTGTGGACCTATCCCAATCG 59 18558491 18558580 GTTTATTTCCTTGTAGAACCTCGG 59 NA Drosophila melanogaster 61 CG33093 FBgn0053093 FBtr0084287 2 1 1 80 3R 18356837 18356857 GAGCACTCTTCATAAACTGCG 59 18356720 18356798 TCACTACTCTATGTTGCAAAGC 58 NA Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0084138 1 1 2 80 3R 17699904 17699924 TACCGTTATGGGATACTACGA 57 17699966 17700050 GCATTGCTATTCGCATCAC 57 NA Drosophila melanogaster 61 CheB93a FBgn0038888 FBtr0084089 2 1 1 112 3R 17233328 17233349 TGGATTTATCCAACTTCAGTCG 58 17233421 17233499 GCTAACATCAATCTCGACGA 57 NA Drosophila melanogaster 61 CG5798 FBgn0038862 FBtr0084016 3 1 1 80 3R 16962660 16962741 ATTTGAGGTACGTTGTGGG 57 16962785 16962803 GGATGGTGAGGAATTCGTG 58 NA Drosophila melanogaster 61 CG17282 FBgn0038857 FBtr0084033 1 1 1 60 3R 16943865 16943884 ATGTAATCTACCACACGCAG 57 16943824 16943842 TAGATGCTCTTCTCGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7056 FBgn0038852 FBtr0084037 2 1 1 92 3R 16903112 16905928 ATGGACTGCGAAGGATTCC 59 16903038 16903059 GAAGTTCGACATGTAGAAGCTG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 3 9 9 105 3R 16799059 16799235 GTCAAGAATGGACCTACCG 57 16799304 16799322 TTGCAGATGATCAGATCGG 57 NA Drosophila melanogaster 61 Takl1 FBgn0046689 FBtr0083996 1 1 1 117 3R 16597970 16597988 ATGGAGTACCTGGAGGAGG 59 16597818 16597889 AGTATGCTAAGGCCTTGGC 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 2 3 3 82 3R 16562578 16562596 CCAAGTTCCCTAGATGGGA 58 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 CG4686 FBgn0038739 FBtr0083816 2 1 1 166 3R 15690865 15690883 TCTTTATGGGCGCCTACTG 59 15691012 15692147 CAAAGTGCCAGTGAATACGG 59 NA Drosophila melanogaster 61 CG6255 FBgn0038708 FBtr0083769 2 1 1 60 3R 15288365 15288386 ATCTTTATACCACCTCCATCCG 59 15288326 15288346 CAATTTCACTCTCGATAGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 3 2 2 143 3R 15137653 15137672 GCGATCTCAACTACTACGGA 59 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 CG14302 FBgn0038647 FBtr0083673 2 1 1 136 3R 14558427 14558521 CATGAAATTCTTCAACCTGCTG 58 14558618 14558636 TGCTAGTCGTACCATCGAC 59 NA InUTR Drosophila melanogaster 61 CG34283 FBgn0085312 FBtr0112479 3 1 1 166 3R 14548189 14548207 TTGAGGAGCACCTAGTCTG 58 14547984 14548062 GATATGATTCTCCATTTCGGCA 58 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 1 1 1 62 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192723 14192806 AAACACGCTGAGATGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG18598 FBgn0038589 FBtr0083569 3 1 1 125 3R 14076887 14076907 GAGAAGCTCAAAGGTTTGGAC 59 14076994 14077077 CTTTAGCAGGGACTCCTCG 59 NA Drosophila melanogaster 61 CG14314 FBgn0038581 FBtr0083560 3 1 1 109 3R 14042506 14042524 GGAACTGCTCAAGTTCCAG 58 14042594 14042677 GAAGATCCTCCATTATGAGCAG 58 NA Drosophila melanogaster 61 CG14318 FBgn0038544 FBtr0083530 2 1 1 162 3R 13609574 13609664 AATCATTGGCGATCAGCAG 58 13609430 13609448 CATTGATCGTTCGCCTGTC 59 NA Drosophila melanogaster 61 CG7606 FBgn0040565 FBtr0300628 2 1 1 159 3R 13422301 13422319 TAATCATCCTGGTTGCCCT 58 13422442 13422460 GAGGAAGGACATCGACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5860 FBgn0038506 FBtr0083438 2 1 1 60 3R 13235691 13235711 TCCTGATGGAAGAAACTTCAC 58 13235733 13235751 CGATAGATAGCCAACCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 1 1 1 128 3R 12978105 12978123 CGATGGCTCTGCTAAAGGA 59 12978215 12978289 TGACTCCATTCATGCTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sxe2 FBgn0038398 FBtr0083225 2 1 1 117 3R 11911736 11911755 GCGGTACGATCTTTATACGC 59 11911835 11911919 AATGGAGACCCTAACTGGC 59 NA Drosophila melanogaster 61 CG10264 FBgn0038394 FBtr0083222 3 1 1 75 3R 11869428 11869447 TACTCGCGAAATTGTCAACG 59 11869698 11869716 ATTAGAGCGTTTGCACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34276 FBgn0085305 FBtr0112471 2 1 1 80 3R 11752014 11752104 GAGTTATTCGATCAAACGCAG 57 11752146 11752164 TTGTAGAACCAATTGCGCA 58 NA Drosophila melanogaster 61 spn-E FBgn0003483 FBtr0083183 1 1 1 80 3R 11667959 11668044 GGTCGATTACTTGCATCGT 58 11668085 11668106 CAGACATATTTCGAATGCACTC 58 NA Drosophila melanogaster 61 alpha-Man-IIb FBgn0026616 FBtr0083179 3 1 1 146 3R 11647095 11647115 CAACTTCAAGCGAAACATAGC 58 11647223 11647300 TCCAACTGTATATCGCCCG 59 NA Drosophila melanogaster 61 CG9589 FBgn0038361 FBtr0083173 3 1 1 60 3R 11614890 11614908 ACGATTGTGTTCTTCGGAC 58 11614930 11614950 TGTAGTTCCCAAAGAACTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4525 FBgn0038358 FBtr0083170 1 1 1 80 3R 11602484 11602564 ATTGGGATCGAAAGAGCAC 57 11602607 11602626 ATAGTGTCACACTCTGTTGC 58 NA Drosophila melanogaster 61 CG14871 FBgn0038343 FBtr0300174 2 1 1 156 3R 11311034 11311053 TAAGACAACGATGCATTGGC 59 11310781 11310853 GTTAAAGCAGCATGTGCGA 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083078,FBtr0083080 1 2 3 113 3R 11136006 11138125 TGTTTGAAACGCTAAGTGCT 58 11138201 11138219 CTTCTCAAGCTTCATCGCT 58 NA InUTR Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083134 3 1 2 166 3R 11055102 11055120 TTCCAAATTTCCGCACGTG 59 11054890 11054972 CTGTGGTGTTGTCGTTGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17304 FBgn0038267 FBtr0083012 2 1 1 65 3R 10685075 10685094 AAATGATCATCGAGGTGCTC 58 10685029 10685049 ACATCATTCTAGTGGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 1 2 2 82 3R 10485960 10485979 ATATCCAAGGAGTTTGGAGC 57 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG9649 FBgn0038211 FBtr0082902 1 1 1 83 3R 10041782 10041800 CACGAACAGTACAATCCCA 57 10041650 10041737 GTAATCGCCAATATCAACGTG 57 NA Drosophila melanogaster 61 CG14356 FBgn0038207 FBtr0082908 1 1 1 188 3R 9957729 9957747 AACGTCTGTGATACTCCGT 58 9956906 9956924 CAGTAGGAAGCCGATTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12402 FBgn0038202 FBtr0082914 3 1 1 84 3R 9931787 9931871 ATTTGCCAATACCAGACAAGAC 59 9931724 9931742 CTCCATATCCCATCAGGCC 59 NA Drosophila melanogaster 61 CG9602 FBgn0038175 FBtr0082838 3 1 1 130 3R 9543757 9543841 AAATTCCATCCAGTGACATGTC 59 9543648 9543668 CCATTTGAAGATGTCGGAGTC 59 NA InUTR Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 3 3 3 98 3R 9485362 9486071 TGGTGAAGAGATCACCGAG 58 9485282 9485301 TTCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 3 1 1 77 3R 9089614 9089693 AAACTAGATGCCCTACGCTC 59 9089556 9089574 CTTTGTCTTGGGTCGAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8476 FBgn0038127 FBtr0082781 3 1 1 60 3R 9045845 9045863 AATCTCCGCAAGAATCCAC 57 9045803 9045822 TGATACTGTGACCAAACCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300071,FBtr0300072 2 2 2 80 3R 8869504 8869526 CGTAAACACTATCGCTACTACCT 59 8869562 8869653 CGTATAAACACCTGGAAGTTCAC 59 NA Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 3 2 2 96 3R 8681900 8681973 GTTCGCCACGTTTGATGAG 59 8681730 8681750 AATATTCAAACGACTCTGCGG 59 NA Drosophila melanogaster 61 mus308 FBgn0002905 FBtr0082662 1 1 1 80 3R 8532938 8533011 TCAATATGTGCCAGACATTCG 58 8532878 8532896 CGTAGCTGCTATAACCACG 58 NA Drosophila melanogaster 61 desat2 FBgn0043043 FBtr0082592 1 1 1 80 3R 8263089 8263178 TACGACAAGACCATGAATCCT 59 8263220 8263238 GTGATGGTAGTTGTGCCAC 58 NA Drosophila melanogaster 61 Pp1-87B FBgn0004103 FBtr0082595 1 1 1 127 3R 8250235 8250347 AATGATGCATGAAACCCGG 58 8250126 8250144 AAACTGCAGTCATCTGCTG 58 NA InUTR Drosophila melanogaster 61 pps FBgn0082831 FBtr0301631 3 1 1 94 3R 8239994 8240077 TTGGGAACATCATGGAGGA 58 8240135 8240153 TTCGTCTTCCTCTTGGTCC 59 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 1 2 2 80 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617678 7617697 AGTCTACGGGAATGAAGTCC 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082457 3 1 6 64 3R 7417024 7417235 CTAAAGATCCGAGAGGGCA 58 7416978 7416997 GAATACTCGTTGGCTACGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5214 FBgn0037891 FBtr0082358 1 1 1 84 3R 7072040 7072058 CATCATCAATCCGCCACAG 59 7072104 7072188 TATCTTGACCTCTCCCTTGAC 58 NA Drosophila melanogaster 61 CG14692 FBgn0037836 FBtr0302798 2 1 1 80 3R 6621448 6621467 TGAAGCTCTGTTCGATTCAG 58 6621322 6621406 ATGTCCAGAGACTGTACGAG 58 NA Drosophila melanogaster 61 TfIIFbeta FBgn0010421 FBtr0082310 1 1 1 119 3R 6592970 6592989 CTAAAGCTGGAGTCCATACG 57 6592805 6592890 CTCCCGATATTCAATGTTGTG 57 NA Nonspecific Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198,FBtr0082196,FBtr0301386,FBtr0082197 1 6 6 114 3R 5931595 5931613 CTGTGAATTGGGTCGTCTG 58 5931434 5931517 ATCCTTCTGGGCTTCTTCG 59 NA Drosophila melanogaster 61 Npc2e FBgn0051410 FBtr0273369 3 1 1 84 3R 5879518 5879536 TTAAGGATTGCGAGGAACC 57 5879584 5879660 TTGTTGTTATTGCCCAGGA 57 NA Nonspecific Drosophila melanogaster 61 CG12419 FBgn0037769 FBtr0082148 1 1 1 60 3R 5807742 5807761 CACCATCATGCACACTATGG 59 5807784 5807802 GTAGCCCTCGTAGTCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS29 FBgn0037752 FBtr0082136 2 1 1 71 3R 5604378 5604396 TATGGCCTTAACATCTGCC 57 5604430 5604507 TTAGTCCAGCTTCTTGAAGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS29 FBgn0037752 FBtr0082136 3 1 1 171 3R 5603856 5603874 CATGGGTTTCGCTACTCTC 58 5604430 5604507 TTAGTCCAGCTTCTTGAAGC 57 NA InUTR Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 3 2 2 84 3R 5597065 5597086 AACGCATTGCTATTATTGGAGG 59 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 CG16817 FBgn0037728 FBtr0082082 3 1 1 100 3R 5504359 5504450 CATCGAACACAAAGTTACGGA 59 5504512 5504530 CCTCGTGGAGGAAGTTCAG 59 NA Drosophila melanogaster 61 CG8358 FBgn0037727 FBtr0082081 2 1 1 108 3R 5502288 5502306 TTCGATCCCAAACTGAAGG 57 5502375 5502455 TGAAGTTGTTAGCCATGTAGAG 58 NA Drosophila melanogaster 61 alpha-Man-II FBgn0011740 FBtr0082031 1 1 1 80 3R 5242203 5242319 CATACACAGAAGCTGGATGTG 59 5242361 5242379 ATTCTGCAGGAAAGTCAGC 58 NA Drosophila melanogaster 61 hb FBgn0001180 FBtr0081950 3 1 2 82 3R 4523072 4523090 TTTCCAAATTCTCCCGCAG 58 4519855 4519873 CTGTCGTCTCCCAGTTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 p FBgn0086679 FBtr0081887 3 1 1 155 3R 4489275 4489376 AATCGCATCAAGTACACCTG 58 4489139 4489157 ATTTGCCGATATGCTGAGG 58 NA Drosophila melanogaster 61 CG9601 FBgn0037578 FBtr0081854 3 1 1 60 3R 4168778 4168798 TATGACAAGGAGAAAGCTGAG 57 4168738 4168756 TCTCGGATTTCTCTGACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807,FBtr0100368 3 2 2 83 3R 4063877 4063896 GCATACCTCCAATGGAAGTC 58 4063746 4063833 CTTGACATTTCGACCTTTCTG 57 NA Drosophila melanogaster 61 CG7910 FBgn0037547 FBtr0081790 1 1 1 85 3R 3914739 3914757 GATTCAACGGCCTTATGGC 59 3914803 3914879 AAGCAATTGATTCAGATGGCTC 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741,FBtr0081743 2 4 4 81 3R 3588273 3588363 GGAAGTAGGTCACCTAACTACC 59 3588402 3588423 GTTGCAAATGTCATCTATGCAG 58 NA Drosophila melanogaster 61 CG31146 FBgn0051146 FBtr0081541 2 1 1 80 3R 3501115 3501136 TATTGCGCTTCTATATGCAGAG 58 3501176 3512166 TGTCCTGGTATTTCTTCAGC 57 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551,FBtr0081550 1 2 2 80 3R 3346282 3346300 GCCTGGAGTAACTCCATCC 59 3346158 3346241 CATAAGCTTTACCTCTGGAACC 58 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 1 2 2 94 3R 3077084 3077102 ACCACTTCAGCTCCTAGAG 58 3076953 3077026 AAGACATTGGTCATCGACG 58 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 3 2 3 94 3R 2888146 2888167 GAAGGATCTGAATCTTGTGCAG 59 2888222 2888306 CACAAGTACCTTCCTGGCA 59 NA Drosophila melanogaster 61 Sodh-1 FBgn0024289 FBtr0081627 3 1 1 82 3R 2879312 2879595 CTTTAATGGCTGCTCAAGC 57 2879640 2879659 CTCTTTAGCTACATCGAGGC 58 NA Drosophila melanogaster 61 CG1315 FBgn0026565 FBtr0081699 2 1 1 80 3R 2468968 2469598 ACCGGATCTGAAGATCATCG 59 2468907 2468925 TAGGCAATGAGGTCCTGTC 58 NA Drosophila melanogaster 61 CG10286 FBgn0037439 FBtr0081717 1 1 1 60 3R 2195727 2195748 TAGCGGAGATTATAACCAACCT 58 2195767 2195787 CTATCTGTATCCCAGTTGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31556 FBgn0051556 FBtr0078612 3 1 1 153 3R 2134651 2134950 TACGACACAAGTTGGAATTGC 59 2134518 2134538 AACCACTACAGAGTCATCGAC 59 NA Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 3 2 2 94 3R 2037880 2037899 CATTCGAGTACTCCGAGGAG 59 2037956 2038123 GGACTTGATGAAGCGTTCG 59 NA Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 3 2 2 99 3R 1662757 1662831 TTTAATTGGTATCGCAACGGG 59 1662891 1662910 GAACAATGTGCCTAGACTGC 59 NA Drosophila melanogaster 61 elm FBgn0037358 FBtr0078732 3 1 1 159 3R 1480380 1480399 CAAATCCAGGAGGAGACTGG 59 1479339 1479357 AATGAACTATCCGCTCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12170 FBgn0037356 FBtr0078709 3 1 1 60 3R 1464151 1464169 GCCCTCCATCAACATTGAG 58 1464193 1464211 ATCAGTAGCTTTCGTGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rev7 FBgn0037345 FBtr0078699 2 1 1 60 3R 1414848 1414866 GCACAAGAACTTCTTCGCC 59 1414885 1414908 CCTTCTGATACACTATTAGCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hdac3 FBgn0025825 FBtr0078767 3 1 1 125 3R 1299892 1299911 AATGAAGATCTACAGGCCGT 58 1299655 1299742 GTATAGGCCACGGAATTGC 58 NA Drosophila melanogaster 61 CG2016 FBgn0250839 FBtr0078847 2 1 1 113 3R 783153 783230 GGAGTACGAGGGAGTTAAGG 59 783059 783077 TCCTTCACGTTGAAGTCCA 58 NA Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 2 2 2 80 3R 776120 776202 TAACATCCATACAGTCACTGC 57 776060 776079 TTTCTTTATACAGCTGGGCG 58 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 1 2 2 85 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748534 748677 AACAAATACCTGGTGTACTCCT 59 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 2 2 2 82 3R 240299 240317 AGGTGGAACTGCTATCGTC 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0300936,FBtr0078903 1 2 2 80 3R 133769 133996 TACGCACAAGAAATCTTTGGG 59 134038 134056 GTATCCACATTCCCGGAGG 59 NA Drosophila melanogaster 61 abs FBgn0015331 FBtr0078967 1 1 1 60 3R 60071 60092 GGTTGAGTACGTTAAGCAAGAG 59 60113 60131 GGTCTTCTGTAGGCAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U12:73B FBgn0041721 FBtr0075315 2 1 1 63 3L 16646870 16646891 TGCCTCAAACTAATGAGTAAGG 58 16646915 16646933 GAAGCCAATACTGCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg7 FBgn0083121 FBtr0300232 3 1 1 161 3L 1667231 1667249 GTAGAGCGAGGATGAACGT 59 1667032 1667109 TAAAGACAGCCAATTTAGAGCG 59 NA Drosophila melanogaster 61 CG14453 FBgn0037179 FBtr0078519 2 1 1 64 3L 22687293 22687311 GCTCCTCGGATAGTACCAG 58 22687339 22687357 AGTTGTGTCGGAGGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14459 FBgn0037171 FBtr0113185 2 1 1 102 3L 22576177 22576195 TCTCCAACTCATCGTCCTC 58 22575184 22576114 ACACAGAGACCGTTATTATGAG 57 NA Drosophila melanogaster 61 CG7148 FBgn0046301 FBtr0078448 2 1 1 97 3L 21823958 21823976 TTCAAGCAGAAGACGGGAG 59 21823822 21823900 CTCTTTAGGTTCGCTCTATCCA 59 NA Drosophila melanogaster 61 CG7370 FBgn0037133 FBtr0078436 3 1 1 178 3L 21763051 21763072 GCAATTAATGCTCAGAAACTCG 58 21763307 21763326 TTAAGTGTTGACTTGGGCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7370 FBgn0037133 FBtr0078436 1 1 1 177 3L 21763051 21763072 GCAATTAATGCTCAGAAACTCG 58 21763307 21763325 TAAGTGTTGACTTGGGCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450 1 1 2 87 3L 21753191 21753209 GGAGAGGAGTTACGTGACG 59 21741293 21753146 GGAATTTAACTTCCAGATCTACCAC 59 NA Drosophila melanogaster 61 CG33291 FBgn0053291 FBtr0078427 3 1 1 102 3L 21658723 21658741 TTCCAGCTAGAGGGATTGC 59 21658807 21658887 CGTTATAGACCTTGGCGTG 58 NA Drosophila melanogaster 61 CG12972 FBgn0037076 FBtr0078403 2 1 1 80 3L 21339167 21339799 ACACCAAAGGGATCAAATCC 58 21339106 21339125 CATAGTAACGGATTACGGCA 57 NA Drosophila melanogaster 61 CG10585 FBgn0037044 FBtr0078287 3 1 1 89 3L 21021992 21022189 ATCTGGTGCACAATAGCGT 59 21022242 21022260 TGTTGCCAAACGACATGTC 59 NA Drosophila melanogaster 61 CG32432 FBgn0052432 FBtr0078268 3 1 1 82 3L 20840719 20840737 TCTCGGAGAGCTATGTGTC 58 20840602 20840676 ATCCAGTGGTCTTAATACTGTG 57 NA Drosophila melanogaster 61 CG3698 FBgn0037023 FBtr0078273 1 1 1 60 3L 20791047 20791065 GTCCCACAAATCATCGCAG 59 20791005 20791023 TAAACGGGCTAGAAAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3947 FBgn0037019 FBtr0078278 1 1 1 80 3L 20771077 20771157 CCTACTTTATAGCAGGTCGCA 59 20771017 20771036 AGAACACCAGCATGTTTGAC 59 NA Drosophila melanogaster 61 CG6480 FBgn0036964 FBtr0074847 3 1 1 86 3L 20289495 20289514 AGAAGGATGGAATGGTCACG 59 20289369 20289446 GAGCCATTCGTTGTTCCTC 58 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0301126,FBtr0300813,FBtr0074830 2 3 3 70 3L 20236278 20236296 AAAGGAGGAACTCCGACAG 59 20236330 20236348 ATATGGACTCGCCAATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ac76E FBgn0004852 FBtr0074897 3 1 1 80 3L 19967860 19967879 ACAGATTTCCTCTGGAAGGC 59 19967919 19967998 CAGCAGAATCTTGTTAATGCCA 59 NA Drosophila melanogaster 61 Cpr76Bc FBgn0036880 FBtr0113180 2 1 1 115 3L 19516469 19519132 CCGCATTATGAGCATCAGG 58 19519211 19519229 CTGTAGTGACCCTTGACCC 59 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075044,FBtr0075043,FBtr0075042,FBtr0075045 1 4 4 60 3L 18984521 18984539 CATATTCCCAACGCTGGTG 59 18984479 18984497 CACATCAATGCCCAGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3893 FBgn0036826 FBtr0075075 2 1 1 61 3L 18894430 18894448 CCCATTTGATACCAGAGCC 58 18894319 18894337 AATGTTTCGATCCTCGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6865 FBgn0036817 FBtr0075060 2 1 1 113 3L 18857686 18858017 ACGATATAGCCCTCCTGGA 59 18858094 18858112 CTGTTCCGTACTCCTGCTC 59 NA Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075056 3 1 2 92 3L 18814349 18814424 TATGGCCTCCATTGACGAG 59 18814480 18814498 TTGTTCAGTTGGCGATACG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32201 FBgn0052201 FBtr0300051 3 1 1 86 3L 18603731 18603805 CAAATACGGCTCTACAACATCTG 59 18603849 18603869 TTATCCAGCTCCTCTTGACTG 59 NA Drosophila melanogaster 61 CG18231 FBgn0036796 FBtr0300052 2 1 1 80 3L 18601498 18601573 TCATATTCGGCATGATCAAGTC 58 18601612 18601632 CCTTATTCAGAGCTTCGTAGG 58 NA Drosophila melanogaster 61 CG7460 FBgn0036749 FBtr0075187 2 1 1 60 3L 17734490 17734508 AGGGTCACTTGGAGTACTG 58 17734531 17734550 CCCTTGTCCTTCCAATTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6052 FBgn0036747 FBtr0075195 1 1 1 212 3L 17717446 17717470 GCTCAAAGAGGAATATAATGGACTG 59 17716835 17717276 CACGAGCAGGAGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585 1 1 2 124 3L 17039670 17040458 GATGAGGACAAGTCCGGTC 59 17040545 17040564 TTATCGTACAAACGGAACGC 59 NA Drosophila melanogaster 61 sinah FBgn0259794 FBtr0301683 2 1 1 60 3L 16853339 16853357 GTCGAACTGTTCTCTGAGG 57 16853380 16853399 CCTCCACCTTCCTAATGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32161 FBgn0052161 FBtr0075331 3 1 1 60 3L 16839987 16840006 GGATCTGACACTTCAAGGCT 59 16840028 16840047 GGAATTGGACATGTCTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13025 FBgn0036660 FBtr0075346 1 1 1 80 3L 16771360 16771381 CGAGGTGGAGTTTATATCTACG 58 16771240 16771320 AGGACTTAAGTTCACTTCGG 57 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 1 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG13056 FBgn0040794 FBtr0075376 2 1 1 173 3L 16326441 16326533 CAGAGAATGTACTTATCCTTTGCTC 59 16326664 16326682 AACGATGGTGGAACTCTGG 59 NA Drosophila melanogaster 61 CG13059 FBgn0036607 FBtr0075371 2 1 1 109 3L 16316831 16316914 ATGTTCAAATTCGTCGCCT 58 16316987 16317005 GCAGTCTTGGCAAGAATCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG4950 FBgn0036587 FBtr0290260 1 1 1 60 3L 16260754 16260773 CTGAGTGTGAATGCCTTCTG 59 16260713 16260734 GATTGCCCGTTAGATAAATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13051 FBgn0040799 FBtr0112771 3 1 1 193 3L 16258124 16258142 CATCTTCGCTCTGTTTGCC 59 16257949 16257967 CATAGGGAGCAGTGTAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13051 FBgn0040799 FBtr0112771 1 1 1 192 3L 16258123 16258141 ATCTTCGCTCTGTTTGCCT 59 16257949 16257967 CATAGGGAGCAGTGTAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32154 FBgn0052154 FBtr0075460 2 1 1 170 3L 16231023 16231643 GTGGTTCCCATTTGGATCG 58 16231776 16231795 CAATTGGTAGATGAGCTCGG 58 NA Drosophila melanogaster 61 CG12486 FBgn0036541 FBtr0075533 3 1 1 60 3L 15849167 15849186 CCCACTGAGCATATCTACGA 58 15849126 15849145 CTTTCGTACTTGTGACACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eig71Ek FBgn0014851 FBtr0075575 1 1 1 99 3L 15654389 15654470 GCTGTTGGTTCTTTGTATCCT 58 15654528 15654549 GGATGTAAATCGTTGACAATCG 58 NA Drosophila melanogaster 61 CG16979 FBgn0036512 FBtr0075563 2 1 1 171 3L 15569704 15569722 ACATTTACTCGGGTGGGTG 59 15569915 15569934 GGAGTAAGGTACCTTCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33259 FBgn0036495 FBtr0075615 1 1 1 60 3L 15401030 15401051 TCAGTAAATGGAACTCAAACGG 59 15401070 15401090 CTTTGGTATCACACGTTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7011 FBgn0036489 FBtr0075645 1 1 1 140 3L 15154372 15154395 CCCATATACACGAATCAATTCTCC 59 15154190 15154273 GCCAAATGAGCTGTGTCTC 59 NA Drosophila melanogaster 61 Ocho FBgn0040296 FBtr0299779 3 1 1 60 3L 14968669 14968688 CCGTCATCGTTTACAATGAG 57 14968711 14968729 TAATCCTCCTGGTCGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13473 FBgn0036442 FBtr0075689 3 1 1 61 3L 14722123 14722146 GTCCTTAAGATTGACGTTGATGAG 59 14722165 14722184 ATGCTGTTGACTTCGTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps36 FBgn0086785 FBtr0075818 3 1 1 131 3L 13505342 13505361 AATCCTACCTCATGAGCCTG 59 13505172 13505248 CACCTTGCTCCTCGATAGG 59 NA Drosophila melanogaster 61 CG32117 FBgn0052117 FBtr0075905 3 1 1 62 3L 12896739 12896760 CAAATTCGATTGATTTCGGACC 58 12896698 12896716 CTCCGACTCGTGATGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42588 FBgn0260965 FBtr0301717 1 1 1 80 3L 12814836 12814855 GATAAGAACAATTGGCAGCG 57 12814896 12814973 CGTGATATTCTTGGGTGTCTC 58 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 2 3 3 89 3L 12788110 12788128 ATTACAAATCCGCCCATCG 58 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG32100 FBgn0052100 FBtr0076006 3 1 1 105 3L 12260743 12260869 TGGATGAGGTCAAAGACACC 59 12260937 12260955 GTGTTCGCTATGACCTCCA 59 NA Drosophila melanogaster 61 CG11529 FBgn0036264 FBtr0076005 1 1 1 60 3L 12191725 12191743 ATATTCCCGGAGGCTTCAC 59 12191767 12191785 CCAATCTTGCTCTCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5642 FBgn0036258 FBtr0076022 1 1 1 80 3L 12138341 12139066 CAACCAACTCGGATTACTACG 58 12138281 12138302 CGTAGTAGTTCCTCTCGTACTC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 1 3 6 102 3L 11811258 11811276 CATTCTACTGCGTGCAGAG 58 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG14130 FBgn0036210 FBtr0076031 3 1 1 134 3L 11809143 11809227 TGTGGATAGCACGAGATACTG 59 11809323 11809341 GAATTCGGATCCGTTGCAG 59 NA Drosophila melanogaster 61 CG32087 FBgn0052087 FBtr0076117 2 1 1 60 3L 11725367 11725387 CCAGTGAAATAGATCGCTTGG 59 11725408 11725427 ACCAGAGACTTCCATTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 2 3 3 80 3L 11622535 11622553 GAATGTGACGTTCAAGACG 57 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139,FBtr0076138 1 2 2 80 3L 11614516 11614597 CTAGAGGAGGCTAAGATCAAGG 59 11614457 11614479 CTGAACCTGGTATCGAATAAGGA 59 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076175 1 1 2 108 3L 11438604 11438679 TGGCGACGATGGATTATCC 59 11438749 11438769 TGCACATACAAGTCTCCTGAG 59 NA Drosophila melanogaster 61 Ir68a FBgn0036150 FBtr0076185 3 1 1 80 3L 11228366 11228384 TGCTAATTGGGAGTTGGGA 58 11228207 11228325 AAAGAGGTTCCGAATAAGTTGC 59 NA Drosophila melanogaster 61 can FBgn0011569 FBtr0076299 2 1 1 99 3L 10260042 10260137 CATCTAGTGATGAAGTGTACGT 57 10259964 10259985 GGTTTATCCTTGTTATCCTCCA 57 NA Drosophila melanogaster 61 Ilp5 FBgn0044048 FBtr0076371 3 1 1 83 3L 9816861 9816879 CCTTGATGGACATGCTGAG 58 9816725 9816814 AATCGAATAGGCCCAAGGT 58 NA Drosophila melanogaster 61 CG8329 FBgn0036022 FBtr0076387 1 1 1 60 3L 9631533 9631554 AATAACTTCTTTCGCCATCCAG 59 9631575 9631593 GAATGAGTCCGATGTCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 2 3 3 123 3L 9624228 9624300 ACAAGTTCACAGGAGATGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG5653 FBgn0035943 FBtr0076559 3 1 1 60 3L 8959160 8959179 TGAGATCCAACAAGGAGGTG 59 8959119 8959137 ACAGCAATGTCGTGAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 3 3 3 81 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923490 AAGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG6776 FBgn0035904 FBtr0076622 3 1 1 80 3L 8512068 8512616 ACATTTGGCCAAAGGTTCC 59 8512660 8512678 TAGGGACAGAACCTCATGG 58 NA Drosophila melanogaster 61 CG6745 FBgn0035901 FBtr0076620 2 1 1 87 3L 8504068 8504086 TTACGTGACCTTCCTGGTG 59 8504136 8504214 CGATGGTCGTAAGTTCAGTC 58 NA Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 3 2 2 60 3L 8398932 8398954 GCTATCCGAAGTTTAACTATGCC 59 8398972 8398992 GCTCCCAGATTCTGTAGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7207 FBgn0027569 FBtr0076717 1 1 1 80 3L 8282318 8282339 CTATAAATCCGAATCGGAGTCG 58 8281310 8282277 GACTCATGGGCCTTAATGG 58 NA Drosophila melanogaster 61 CG13676 FBgn0035844 FBtr0076732 2 1 1 80 3L 8138571 8138589 AGATCCACTTCAAGTGCGA 59 8138224 8138528 CGCAATGGTGATAGATCTGG 58 NA Drosophila melanogaster 61 Arp66B FBgn0011744 FBtr0076737 1 1 1 80 3L 8108435 8108516 TCCATCAAGTATCCGGTGC 59 8108373 8108391 CTTAAAGACGCACTGCTCC 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 CG33278 FBgn0053278 FBtr0076857 2 1 1 60 3L 7444730 7444750 CTGTTAAACCATCTTTGGCTC 57 7444772 7444790 GTAGTCTTGCCGATTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8563 FBgn0035777 FBtr0076852 2 1 1 81 3L 7387361 7387848 ACACAACGGATCGTTTCTG 58 7387891 7387911 AAGTTACGATTGATGTCCACG 58 NA Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833,FBtr0113151 3 2 2 60 3L 7227965 7227985 GAATTCATGGGACATCGACAG 59 7228004 7228025 ACTTCAAAGACCCACTATTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833 2 1 2 107 3L 7228389 7228537 ATATTGTACTCAGTCCCGGC 59 7228607 7228625 GAGGACAGGCACTGTACAG 59 NA Drosophila melanogaster 61 CG17742 FBgn0035746 FBtr0076922 2 1 1 62 3L 7154513 7154531 CAACGCCAACAACATTCAC 58 7154469 7154489 CGAATAATCCGATTTCTCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10479 FBgn0035656 FBtr0077070 3 1 1 152 3L 5962037 5962057 GAAATGGATAAACAGGAACCG 57 5961685 5961925 GAGAAGGTCCTCATCATAGTC 57 NA Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 2 2 2 194 3L 5927082 5927164 ACAAGATAAAGGGCTTCACCA 59 5926908 5926926 TCAGCGAGCCATACATCTC 59 NA Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 1 2 2 80 3L 5556488 5556603 TCGTTCATAAGGTTCCCGT 58 5556426 5556444 TGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 2 2 2 90 3L 5138226 5138303 CCACAAAGGGTTATGCGAC 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 CG32237 FBgn0052237 FBtr0073356 3 1 1 78 3L 4852426 4852447 CATAGATTCCATCGTCAAAGCA 59 4852293 4852311 GGCAATAAAGATGCAGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 1 3 3 149 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552225 4552246 CGTCTACCCAGAAGTATTTGGA 59 NA Drosophila melanogaster 61 CG11349 FBgn0035550 FBtr0073305 3 1 1 60 3L 4474784 4474802 GCGTTCAGTCCTTATACCC 57 4474826 4474844 CAGAAATCCTAGCTGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160,FBtr0073161 1 2 2 110 3L 3905503 3905524 GATTACCGTGTTGATATTGCTC 57 3905666 3905685 AATGAGCTTGAATACCAGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14958 FBgn0035413 FBtr0073039 3 1 1 150 3L 3190002 3190126 ATTACTCGGTTTGATTGCCT 57 3190238 3190257 GAAGGTTTGGTTGGTATTCG 57 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072957,FBtr0072960,FBtr0072959,FBtr0072956 3 5 5 81 3L 2556715 2556799 CAATAGAGATACGTTCCGTTGAG 59 2556656 2556675 CAAAGGAATTTCAAGCGCTG 58 NA Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072871 2 1 2 144 3L 2197387 2197467 GTTATCTGGCGATAGTCAGC 58 2197574 2197592 AGGATGATCAGGTTGGTGG 59 NA InUTR Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072833 1 1 2 131 3L 1857282 1857303 CCGACTTTAAGAAGATGTTCCC 59 1857395 1857522 TGATGAGGCTCTGGTTGTC 59 NA Drosophila melanogaster 61 CG13933 FBgn0035270 FBtr0072792 2 1 1 80 3L 1773471 1773491 CCCATTATGGTTCTGCTAGTG 58 1773358 1773431 CAGATAGCAGACCTTCATGGA 59 NA Drosophila melanogaster 61 l(3)02640 FBgn0010786 FBtr0072679 2 1 1 80 3L 1335948 1335970 CTCTGATTCAGACCAAACATGTC 60 1336010 1337282 TCGACATGGTGTGGATCTC 59 NA Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072725 3 1 2 262 3L 1322692 1322760 TTGGTTTGGTTATCCTGCAG 58 1322449 1322472 CTCTGGTGGATAATAGTAATGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660,FBtr0072659 3 3 3 104 3L 1269166 1272974 TTCTTCAAGGCAAACTGGT 57 1273042 1273060 GTGCTTCTCCAGTCTATCG 57 NA Drosophila melanogaster 61 CG32334 FBgn0052334 FBtr0113434 1 1 1 62 3L 1112054 1112072 ATGTTGCCGCAAATGATGG 59 1110405 1112030 CTATAATGCCACATCCTCGTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0100851,FBtr0072493 3 2 6 120 3L 216998 217018 CGCTAGTTATCCTGATTTGGA 57 217100 217228 ACACGCATTATGTTCAGGA 57 NA InUTR Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 2 2 2 88 3L 197405 197425 CGAACGAAATGGTATTCTGTG 57 197279 197355 TAGCCATTGTCCTGATGGA 58 NA Drosophila melanogaster 61 Ir51a FBgn0033997 FBtr0087364 1 1 1 60 2R 11093161 11093181 GATTTACAACCCATCCCTGAG 58 11093201 11093221 AAAGCCCAGAATACTAAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30220 FBgn0050220 FBtr0086332 1 1 1 60 2R 15616400 15616420 TGTCTAGTGGTTAGGATACCC 58 15616442 15616460 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 3 3 3 105 2R 20920194 20924125 CTCAATGCCGCTATTCAGC 59 20924189 20924212 GGCTCATCAGTTGATTTATAAGGG 59 NA Drosophila melanogaster 61 bs FBgn0004101 FBtr0072271 1 1 2 80 2R 20263225 20263243 CATACCGCAGAAGATGCTG 58 20263287 20263365 ACATACTGGTTGCCATCCT 58 NA Drosophila melanogaster 61 Zfrp8 FBgn0021875 FBtr0072253 2 1 1 120 2R 20021701 20021719 TTCCTGGCTCAGCTATACG 59 20021802 20021878 GGACTGTGAAATTGCTTGCA 59 NA Drosophila melanogaster 61 CG13566 FBgn0034942 FBtr0072206 2 1 1 80 2R 19849568 19849586 AAACTATGGCACCTGTGAG 57 19849452 19849528 GTGAAGAATATCAGTAGTCCCTC 58 NA Drosophila melanogaster 61 gbb FBgn0024234 FBtr0072127 1 1 1 66 2R 19739427 19739445 GATCATGCACAGAGTGCTG 59 19739475 19739493 CAGGAACTCGAGGATCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF6 FBgn0034915 FBtr0072235 3 1 1 60 2R 19737300 19737320 GAAGATTTATCGTGTGGAGGA 57 19737260 19737278 ATCATTGCAGGCGATAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nxt1 FBgn0028411 FBtr0072241 1 1 1 187 2R 19699394 19699469 TGGACAGCGATTTGAAAGC 59 19699155 19699174 CTCCTGAAAGTAGCTCTCGA 58 NA Drosophila melanogaster 61 CG42241 FBgn0250870 FBtr0290304 1 1 1 60 2R 19560592 19560610 ATGACGATAGCATTCGCAG 58 19560634 19560652 AAACCCACATCCAAATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 3 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific Drosophila melanogaster 61 CG30416 FBgn0050416 FBtr0300955 2 1 1 86 2R 19209575 19209674 GAAGATACAAGTTCGACAGATCTC 59 19209512 19209530 GTCAGATTCGGAATGCCCT 59 NA Drosophila melanogaster 61 CG13531 FBgn0034786 FBtr0071910 1 1 1 80 2R 18735870 18735958 CATTTAAGCGTACCTCAAGC 57 18735809 18735827 TTGAGACAAGATGGCTTCG 57 NA Drosophila melanogaster 61 CG30274 FBgn0050274 FBtr0071888 3 1 1 94 2R 18712763 18713013 TGAAATATTCGTTCCCGACG 58 18713070 18713088 TAATGACGCTAAAGCAGCG 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301377 1 2 8 88 2R 18609274 18609395 TATGCAGCCAAGGTCTACG 59 18609204 18609222 TCCACGAGGAATGTGACAG 59 NA Drosophila melanogaster 61 Obp58b FBgn0034768 FBtr0071871 3 1 1 83 2R 18592248 18592450 ATATCACTGCGCTTGAATGG 58 18592496 18592514 ATGGTGGATGTTCTCCTCG 59 NA Drosophila melanogaster 61 Cyp6d2 FBgn0034756 FBtr0071928 3 1 1 80 2R 18541287 18541309 CTCTACGTCTAGGGATGAATCTC 59 18541156 18541249 ATTAGCTTAGCAATCGGTGGA 59 NA Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071939 3 1 2 68 2R 18500859 18500877 GATGCCATGGAGTTTGCTG 59 18498884 18500828 CCGCCAGAGATTAGAAACTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34208 FBgn0085237 FBtr0112401 2 1 1 62 2R 18220667 18220688 TTAGTTTGTTCCTGGTATTCGG 58 18220711 18220729 CTAGGGCTAAAGTGCCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PpN58A FBgn0025573 FBtr0071734 3 1 1 60 2R 17769601 17769620 CAGTCCATCGAAACATTGAC 57 17769560 17769578 AGAACTTGGTCGGATACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppcdc FBgn0050290 FBtr0071672 3 1 1 88 2R 17579806 17579824 TAGATCTAGGCAAGTGGGC 58 17579876 17579951 ATTATCGCAAATCCCGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071690 3 1 2 279 2R 17494112 17494193 TTACTACATGCTGCAGGGT 58 17493577 17493595 CTAAATCAGGACGCAGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 EfSec FBgn0034627 FBtr0071608 2 1 1 80 2R 17273333 17273411 CACTATTATAGGAGGTGCCCAG 59 17273274 17273292 GCTGTTTGGGTTTGTTTGC 59 NA Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 2 2 2 106 2R 17209251 17209326 ATACAGAAAGGGTCATACGGA 58 17209165 17209183 GAATAACCAAAGCCACGCA 59 NA Drosophila melanogaster 61 CG30391 FBgn0050391 FBtr0071621 2 1 1 60 2R 17153128 17153149 AGTGCTACATGAAGCTATTGGA 59 17153089 17153110 ATGTTGTGCAGAAAGTATTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 1 2 2 102 2R 17012643 17012661 CCTGGCGAATCTCATAGCT 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 CG9394 FBgn0034588 FBtr0071567 2 1 1 60 2R 17006857 17006876 CCTCATGTTCCATGTGAACC 59 17006897 17006917 ATAAACTTCCACCAGATAGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17999 FBgn0034552 FBtr0071561 2 1 1 80 2R 16736474 16736632 CTCTGTAACTGCAAGAATCCG 59 16736414 16736433 TCCCGATATCCAGTAGAGGG 59 NA Drosophila melanogaster 61 sktl FBgn0016984 FBtr0071563 2 1 1 94 2R 16717886 16719296 ATTTCTGTAGAGCGGAAATCC 58 16717812 16717831 GCTGATCCTTTAGCCTATCC 57 NA InUTR Drosophila melanogaster 61 CG16742 FBgn0034529 FBtr0086227 3 1 1 93 2R 16511667 16511736 CACTCAACAACCGTATTCCG 59 16511791 16511810 CATACTTGTGTTCCTGCCAC 59 NA Drosophila melanogaster 61 Obp57d FBgn0043536 FBtr0299804 3 1 1 76 2R 16436564 16436582 AGACTTGTACCGCATCTGG 59 16436440 16436458 CACGGATCGTTAGAATCGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG16894 FBgn0034483 FBtr0086324 2 1 1 60 2R 16099482 16099503 TGAATACATCAAACGAGTCCAG 58 16099443 16099464 TCGGTCGTAGATAAGATTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15120 FBgn0034454 FBtr0086463 3 1 1 121 2R 15387186 15387206 GACGAAACATCCCTACAAGAC 58 15387289 15387417 TGCTCAATGCGTTCTTCAG 58 NA Drosophila melanogaster 61 CG11906 FBgn0034425 FBtr0086563 3 1 1 89 2R 15169797 15169881 GGAGTATGATCTTTACCTACTGGA 59 15169731 15169749 GTCTGGTAGCCACAGTCAG 59 NA Drosophila melanogaster 61 CG15098 FBgn0034398 FBtr0086629 3 1 1 98 2R 14721619 14721829 CAGGTACCGTTAAGGAACG 58 14721539 14721558 CCAGCATTGCAATATTGGTG 58 NA Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528 1 1 2 139 2R 14567573 14567647 TACCAACGAGATGGCTACG 59 14567452 14567470 TGGTTCCAAGGCTGATCAG 59 NA Drosophila melanogaster 61 Prp19 FBgn0261119 FBtr0086723 2 1 1 138 2R 14337087 14337105 CGTTAAGCTGTGGGATCTG 58 14335107 14336985 CAGGTAAACCCTGACATCG 58 NA Drosophila melanogaster 61 CG5773 FBgn0034290 FBtr0086813 3 1 1 141 2R 13931085 13931103 GACATTCAACATGGAAGGC 57 13930870 13930890 GAAACCATCGTCAGAGATCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14492 FBgn0034283 FBtr0086818 2 1 1 91 2R 13781782 13781800 CTACCTGCTCCCTAATTGG 57 13781648 13781666 TAATATCATCGCTGCTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 olf186-M FBgn0015522 FBtr0086799 1 1 1 60 2R 13735640 13735662 GATTCGAGGTCAATCATCATAGG 59 13735679 13735700 TATTGTATGCTGGGCTTAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 swi2 FBgn0034262 FBtr0086889 1 1 1 80 2R 13580286 13582523 TTAATAAGGCTGAGCCGTG 57 13580224 13580242 CTCGGTGGTTATGGTAGTG 57 NA Drosophila melanogaster 61 CG42561 FBgn0260763 FBtr0301265 1 1 1 81 2R 13572533 13572551 ACTATCGTTCCGCAAATCC 58 13572596 13572673 CCGGATGTTCGATTCTGAG 58 NA Drosophila melanogaster 61 CG17287 FBgn0034202 FBtr0087000 2 1 1 60 2R 13045088 13045106 GCTTTGAAGTTACTGCCCT 58 13045046 13045070 CATACCAAGTACTGAAGAATGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11400 FBgn0034198 FBtr0086985 1 1 1 60 2R 13022175 13022193 GATCATACGGAAGCCACCA 59 13022216 13022235 CAATCCTTGGCCCAATAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6426 FBgn0034162 FBtr0087042 1 1 1 127 2R 12758830 12758848 CAACCAGACACGTTACTGC 59 12758939 12759027 AATTGGCATACGCATCCTC 58 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087124,FBtr0087123 1 2 2 67 2R 12458148 12458166 ATCATTGGCGTCTACAACG 58 12457858 12457876 TAGTGACCGATCATCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0113086 3 1 2 78 2R 12422579 12422597 TTAGAGTTACGTGGCTCGG 59 12422704 12422723 ACATGTTCTTGTACGAAGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302795,FBtr0302788,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 3 7 13 80 2R 11873029 11873047 GACCTATCCGTCAAAGTGG 57 11872861 11872989 GTACCAGGTTAGCTTAAGATCTG 58 NA Drosophila melanogaster 61 Poxn FBgn0003130 FBtr0087311 2 1 1 194 2R 11715573 11717683 CAGCAAGACCAAGCAAGTG 59 11715397 11715415 ATCTCATCGGTCCACAGAC 58 NA Drosophila melanogaster 61 CG8207 FBgn0034035 FBtr0087342 3 1 1 80 2R 11566008 11566093 CAACATCAGGTACCTTCAGGA 59 11565948 11565967 CCAGCTCTAATCTGATCCCG 59 NA Drosophila melanogaster 61 CG8187 FBgn0034027 FBtr0087355 3 1 1 96 2R 11428031 11428049 TTTCAGACACAAACTGGGC 58 11427900 11427975 GTACTCCAGTCATATTGAGATCC 58 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 3 4 4 146 2R 10757800 10758425 GTCGAAACATAGCAACTGC 57 10757672 10757690 CTTGACAGATACTCCTCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sec61beta FBgn0010638 FBtr0087498 3 1 1 60 2R 10506665 10506746 GGTATCAAAGTTGGTCCCG 58 10506770 10506788 AGACGGAAGCGATGAAGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10104 FBgn0033933 FBtr0087486 2 1 1 60 2R 10279104 10279125 AAATGGATTCAGCAGTTATCCG 59 10279143 10279164 ATAATCACTTCACATCCCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 1 4 4 97 2R 10059940 10059958 CTACTGGGTCACGTTTGGA 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087746 2 1 2 60 2R 9144490 9144510 AGAAGAAACAACTACGGAGCA 59 9144532 9144630 AAGCATCGTATCCTCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33138 FBgn0053138 FBtr0087732 1 1 1 96 2R 9060138 9060156 TACGGACTTCACTTCCAGC 59 9060216 9060295 GCCAGTTGTTGAAGTCACC 59 NA Drosophila melanogaster 61 Nrk FBgn0020391 FBtr0087728 3 1 1 108 2R 9048806 9048884 CATGTGTCCGGATTATGTGG 58 9048953 9048973 GAAACCTATTCCAGCCAAGAG 58 NA Drosophila melanogaster 61 CG3955 FBgn0033793 FBtr0087780 3 1 1 150 2R 9016008 9016095 TTCATCTGCATGGTCAAGC 58 9015876 9015894 TGCAGGAATAGAGCTTGGT 58 NA Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 3 2 2 87 2R 8811821 8811839 ACATGCAAGACCATCTGGA 59 8811964 8811982 CCGAAATAGACGTTGACCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087832,FBtr0087830,FBtr0087836,FBtr0087835 3 8 8 114 2R 8503907 8504050 CTGCTACTACTGGGCACTG 59 8504127 8504146 AAACCAGCTTGATGTACCCA 59 NA Drosophila melanogaster 61 CG13151 FBgn0033750 FBtr0087939 1 1 1 60 2R 8403835 8403853 CCAATGCAGTGGTAAGCAG 59 8403874 8403895 CAGATCAGTTGTTCTACATCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8501 FBgn0033724 FBtr0087915 1 1 1 60 2R 8271781 8271802 AATTCAGGAAGTCATTCGACAC 59 8271823 8271841 GGGCCAATAAGATCAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13160 FBgn0033720 FBtr0087911 1 1 1 80 2R 8262310 8262382 TCTTCGTGGAACTTTCTAAGG 57 8262423 8262442 GACTGACATAGTGTCCAGAG 57 NA Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 1 1 1 76 2R 8079342 8079361 CGCATGTGGATTTCATAGTG 57 8079400 8079479 AAACCTTTCATCGCGATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30039 FBgn0050039 FBtr0088023 2 1 1 80 2R 7939156 7939176 ACACGTTCTAACGATAAGTCG 58 7939044 7939114 TTTCTACACTTGGAAGCGG 57 NA InUTR Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025,FBtr0088024 1 3 3 85 2R 7914602 7914620 GCTGGTCTTCTTCAACGAG 58 7914479 7914555 GCGTGCAATTATCTAGTTTGC 58 NA Drosophila melanogaster 61 CG13198 FBgn0033640 FBtr0088072 2 1 1 81 2R 7542790 7542811 CGAACGATTCATCTTTGATGCT 59 7542852 7543135 CACCGTCATGTGATTCTCCT 59 NA Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088152 1 1 2 94 2R 7265746 7266039 TAACGACATGCGAATCTCC 57 7265670 7265688 CTCGACCTTCGACAAAGTG 58 NA Drosophila melanogaster 61 lambdaTry FBgn0043470 FBtr0088121 3 1 1 60 2R 7224447 7224466 ATATACCGAAGCTCGATGGA 58 7224487 7224507 GGATATTGGGTGATGTTCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0088211,FBtr0300862 3 2 2 65 2R 6828023 6828041 AATTTGGGTGCGAAGTAGC 58 6827908 6827929 GATCGGGATTCTTCTTAAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 3 2 2 105 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860096 ACTATCTCTGACGATCTGCT 57 NA DesignRelaxed Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088443,FBtr0088447,FBtr0088445,FBtr0088446 3 5 5 90 2R 5806136 5806225 TATGCAGATCAACGACAGAG 57 5806065 5806084 CAAAGGAATAGCTCGTGAGG 58 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0300920,FBtr0088381,FBtr0300919 3 4 4 85 2R 5782983 5783064 TTATCGAGCAAACTGAAGATCG 59 5783109 5783128 GTTACTGGGCAGTTGATTCC 59 NA Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0088491,FBtr0289980 2 2 2 83 2R 5711209 5711227 TCAGCTAGACGAACTGGTG 59 5711088 5711164 TTGAGGCGATTCATCTTTAGC 58 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 1 3 3 80 2R 5468498 5468577 ATCTACTACGAGGGTTCGG 58 5468619 5468639 ATGATCTCCGAAATAGAGCAC 57 NA Drosophila melanogaster 61 wun2 FBgn0041087 FBtr0088506 3 1 1 80 2R 5304286 5304366 CTTGCCTCTTACTGTGATGC 59 5304409 5304427 GTGCTCTTCGGAAATGGAC 58 NA Drosophila melanogaster 61 CG8243 FBgn0033349 FBtr0088652 1 1 1 75 2R 4810589 4810607 CAACAAGTACTGCGTGGAC 59 4810798 4810816 GATGCAGAGAAACATGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 gcl FBgn0005695 FBtr0088710 3 1 1 80 2R 4615275 4615364 GAGGATTGTAGTCCTCAGCA 58 4615407 4615425 AGGCTCAAGCAACATACGT 59 NA Drosophila melanogaster 61 Cyp4e2 FBgn0014469 FBtr0088745 3 1 1 81 2R 4334032 4334116 GGAGAAAGACTATGTTATAGATGGG 58 4334153 4334173 GTTATAACCCAGCATCACGAG 59 NA Drosophila melanogaster 61 CG14756 FBgn0033275 FBtr0088804 3 1 1 69 2R 4092793 4092811 TGAACTGCAGGACCTTGAG 59 4092742 4092760 TGAGAGGTCGATTTCCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30378 FBgn0050378 FBtr0088854 1 1 1 60 2R 3838200 3838223 CAGTTCAAGGACTTTCTATACGTG 59 3838242 3838260 ACACCAGACTGTTCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 1 1 1 109 2R 3561475 3561553 TAGGTGCCAACCAGAAGAG 59 3561384 3561402 CTTAAGGCGTTCATGTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2137 FBgn0033190 FBtr0088907 3 1 1 60 2R 3425286 3425304 TCTTAACTCCCAGATGGGC 58 3425328 3425346 AATGGGAATGCTCATCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 2 1 1 61 2R 3379385 3379467 GGATGTGAATTTGCCAGCC 59 3379342 3379360 GAAAGTTGTCCCTCAGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Eg FBgn0033128 FBtr0089024 1 1 1 126 2R 2919300 2919318 ATTCGAGCACTTCAACACG 58 2919405 2919840 AACAACGAACACCTTAGATGTG 59 NA Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 3 2 2 99 2R 2652231 2653048 GCCAATTACTTCCACTGCG 59 2652150 2652169 TTTGCATGAACTGGATCACG 59 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 3 4 4 82 2R 706847 706866 TAACCCGTCTGTTGGAAGAG 59 706726 706805 AGAGGTAATCTTCTTCCCACAC 59 NA Drosophila melanogaster 61 Ir40a FBgn0259683 FBtr0301086 2 1 1 80 2L 22189966 22196263 GCCTCAATAATGTCTTGATGCA 59 22189907 22189926 GGTACTGCTTTGCGTATTCG 59 NA Drosophila melanogaster 61 CG31703 FBgn0051703 FBtr0085946 2 1 1 61 2L 22102919 22102986 ATACCACGGGATTGGTTCC 59 22102876 22102896 CCAAGGGCTATTGAACTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11630 FBgn0032964 FBtr0085909 3 1 1 60 2L 21782661 21782680 GTAACAATCGTCGTCTGGTC 58 21782620 21782641 TTAGGTAAGTTCTGGAGAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dtr FBgn0023090 FBtr0081516 1 1 1 84 2L 21363432 21363507 GCGAAAGCATTAACTGTACCA 59 21363553 21363571 GAATCGCTAGACCTCAGCA 59 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 1 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 3 2 3 88 2L 19166348 19168105 AAGCAGTAAAGCTGTTACTCCT 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 l(2)37Ce FBgn0086446 FBtr0081157 2 1 1 133 2L 19132352 19132370 TCCTTCTCACCTTCGTGAG 59 19132534 19132552 GACGAGAAGGTGATGTCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 2 2 2 125 2L 19047032 19047155 CCTATTCCACTGAAGACGAG 57 19047241 19047261 GTATTGCCCGATCCATATCAG 58 NA Drosophila melanogaster 61 CG10639 FBgn0032729 FBtr0081186 3 1 1 138 2L 18974027 18974045 AAGAGAAATGGCTCAGGTG 57 18973450 18973925 ATCATAATCTCCGCAGCTC 57 NA InUTR Drosophila melanogaster 61 CG17597 FBgn0032715 FBtr0081121 2 1 1 101 2L 18830450 18830549 CATGACCAAGTTTGAGAAGCC 59 18830369 18830387 AACTTGATTCCCGCATCCT 59 NA Drosophila melanogaster 61 CG10333 FBgn0032690 FBtr0081072 3 1 1 89 2L 18607052 18607070 TAGGGAGAAGGAAAGACGC 59 18607185 18607204 TTATCCCTAGGCCTTTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 kon FBgn0032683 FBtr0300341 2 1 1 82 2L 18491684 18491765 GGATAAAGTTAGATATCGGGTGC 59 18491624 18491645 AATACGCAGATGGATAAATCCG 58 NA Drosophila melanogaster 61 kon FBgn0032683 FBtr0300341 1 1 1 81 2L 18491684 18491765 GGATAAAGTTAGATATCGGGTGC 59 18491625 18491645 ATACGCAGATGGATAAATCCG 58 NA Drosophila melanogaster 61 CG15152 FBgn0032665 FBtr0081034 1 1 1 60 2L 18114695 18114714 GAGACTAAGGCTGGAACCTC 59 18114737 18114755 CGCTGGTAAAGTCAACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17328 FBgn0028895 FBtr0080829 2 1 1 80 2L 16300409 16300427 AATGTTGATGCAATGCGCT 59 16300525 16300545 CGGTAAATACAGTTGTTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7653 FBgn0028935 FBtr0080812 2 1 1 80 2L 15879397 15879417 TAACCATGGGTCATCATAAGC 57 15879279 15879355 CCTGTATTTCACGGTTGGG 58 NA Drosophila melanogaster 61 CG31822 FBgn0051822 FBtr0080813 3 1 1 78 2L 15836986 15837004 AGAGCGACAAGTTCAAGGA 59 15836832 15836850 CATAGTTGACGATGCCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 3 5 5 81 2L 14984076 14984210 GTCTAGTCATATTAATCACTCGCC 59 14984018 14984036 GAGAAGGCTTTGTATGGCG 59 NA Drosophila melanogaster 61 CG3491 FBgn0028887 FBtr0080675 2 1 1 95 2L 14928412 14928493 GGACAAAGTGGAGAAGATTACC 58 14928546 14928567 GTGTTTGTGGATTCATCTTCGT 59 NA Drosophila melanogaster 61 CG4218 FBgn0250844 FBtr0080662 1 1 1 92 2L 14548709 14548727 TCACCAAGGGTTCCAAGAG 59 14548239 14548653 GAAGATCGCCAAACTCCTG 58 NA Drosophila melanogaster 61 noc FBgn0005771 FBtr0080643 1 1 1 86 2L 14491302 14491320 TCAACCGGATTATCTGGCC 59 14491672 14491690 ATTTGGGAGCAAGTCTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 bgm FBgn0027348 FBtr0080590 3 1 1 80 2L 14015967 14015986 AATTATGGCGACTATCCTGC 57 14016026 14016144 CTGCTCATATTGTTTGTAGGTG 57 NA Drosophila melanogaster 61 Orc5 FBgn0015271 FBtr0080543 2 1 1 102 2L 13831069 13831087 CGATTGTTCGTCAAGCACC 60 13831206 13831224 ATTTGGGTCCCAAAGTGGT 60 NA DesignNoJunction Drosophila melanogaster 61 CG31814 FBgn0051814 FBtr0080580 1 1 1 80 2L 13690127 13690146 ATTCACCACAACGTGATCTC 58 13689996 13690086 CTTGATGTGTAAGTACCACGA 57 NA Drosophila melanogaster 61 CG15479 FBgn0032493 FBtr0080481 2 1 1 60 2L 13234358 13234376 TCCTCAAGCGTTTCCTACC 59 13234316 13234334 AGATGTCTTGGATGGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31849 FBgn0051849 FBtr0080490 1 1 1 60 2L 13181562 13181580 GTGTGGTGTCCAAATGCAG 59 13181520 13181538 GTAGACCGTTCCACTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 3 3 3 82 2L 13171658 13171751 AATACTCAGTCGGTCAAATCG 58 13171596 13171614 TTTAGCTCCAGCTTGATGC 58 NA Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 1 1 1 168 2L 12356592 12356663 CATATGTCCCGGAATTGCC 58 12356795 12356813 TTTAGGTAGTCATCGCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290240 1 1 2 116 2L 12207895 12207916 GTTTGCCGATTGTAAATAGGTG 58 12208048 12208069 GCGTTGAAGAAGAGAACTTCTC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0080346,FBtr0300567 2 5 5 119 2L 12298742 12298824 TTAAAGTGACCCTGAGCCA 58 12298907 12298925 GATTGGCCTGAATTTGCTG 57 NA Drosophila melanogaster 61 CG31860 FBgn0051860 FBtr0080340 1 1 1 90 2L 12165511 12165529 GTCTGAACTACGGATGGCA 59 12165583 12165808 ATGTACACGAGGATGCCTG 59 NA Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0080329,FBtr0110911 2 2 2 60 2L 12096756 12096774 TTTATGCGCACAATTACGG 57 12096795 12096816 ACACTCAGGCTTTGAATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp33A2 FBgn0259963 FBtr0300309 1 1 1 60 2L 11837783 11837801 AACGCGTTGAATCCAAAGG 60 11837822 11837843 AGCACCATCCTCTATAGTTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hgo FBgn0040211 FBtr0080201 3 1 1 90 2L 11137622 11137640 TCCCATTGGTGCTAATGGT 59 11137691 11137777 TACCTGGAAGTCCTTTACATCC 59 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 2 2 2 80 2L 11008776 11008796 GTGTATGCGAAATGGTAACGT 59 11008838 11008921 GCGATGTCCAGCTTATCCT 59 NA Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 2 2 2 80 2L 11003231 11003522 ACATGATCAAGGGAGTCACG 59 11003170 11003188 AGGTGACACAGTTGATGGG 59 NA Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 2 3 3 117 2L 10774659 10774752 CGACAATTGTCCAATTCTCGA 59 10774562 10774580 GTTCCAGTTGAATCCAGCC 58 NA Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 1 2 2 80 2L 10745705 10745795 TCTTCGATCCACCAAACGA 59 10745643 10745667 GAGATCTTCTTATGTCATCTGTGTC 59 NA Drosophila melanogaster 61 CG17105 FBgn0032280 FBtr0080106 1 1 1 70 2L 10681056 10681074 TATGCACTCTGCGCTATCC 59 10681108 10681126 AAGCCACCGTGTATACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7329 FBgn0032271 FBtr0080131 3 1 1 96 2L 10630938 10630956 TATACGCTCGATGGATCCG 58 10630795 10630883 GTAGTTGTATCGTATTCAGGTGAG 58 NA Drosophila melanogaster 61 CG6138 FBgn0032268 FBtr0080098 2 1 1 61 2L 10567838 10567857 ACCTGTTCACTTGGTATGGA 58 10567881 10567899 TAGTTTCACTGTCCGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5056 FBgn0032231 FBtr0080003 1 1 1 60 2L 10366932 10366950 TCGTATCGTCAAGAGTGTG 57 10366973 10366992 TGGATCGAATCCGTTATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5390 FBgn0032213 FBtr0080064 3 1 1 80 2L 10304763 10304839 AGTAGCATTGTTGTGAGAGC 58 10304702 10304722 CTTGACATATCGGTCTTCGTG 59 NA Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 2 1 1 62 2L 9938492 9938569 GGTACGACGAGAAGGATCTG 59 9938449 9938468 GCACCTGATAATTCAGGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 gcm FBgn0014179 FBtr0079855 1 1 1 80 2L 9581113 9581209 ACAGTGTCCCAATAGAAATTGC 59 9581054 9581072 AAGTGGGTCACTGGATAGC 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 3 3 3 81 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575367 9575385 CTTCACAAAGTCGGTGTCC 58 NA Drosophila melanogaster 61 Aldh FBgn0012036 FBtr0079806 1 1 1 124 2L 9389970 9390051 GCATTCAAGTTGGGATCTCC 59 9390247 9390265 TTGTCAAGGGTCTCCAGAC 59 NA Drosophila melanogaster 61 CG32985 FBgn0052985 FBtr0079757 1 1 1 86 2L 8963275 8963359 TGGGCTACAATAAGGTCGC 60 8963409 8963427 TTTGAGTCTCTGCCGACTC 60 NA Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0113029 3 1 2 83 2L 8958881 8958899 TACTCAATGCCGGATTTGC 58 8955525 8955546 CAGTATCACAATCATCAGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14274 FBgn0032023 FBtr0079604 1 1 1 80 2L 8338602 8338622 CTGCGATTCCAGTGATAATCC 59 8338663 8340200 TTGTCCAAAGTGCATTCCTC 59 NA Drosophila melanogaster 61 CG14277 FBgn0032008 FBtr0079595 3 1 1 111 2L 8242726 8242797 TTGCAATGGCTACAAAGCC 59 8242869 8242890 CAGTTCACACTTCTTGTTTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0301187 1 1 2 80 2L 8213248 8213344 AGACGATCTCAATATCCTTCG 57 8213386 8213404 ACTGTACGGACAATAAGCC 57 NA Drosophila melanogaster 61 Trf FBgn0010287 FBtr0079542 3 1 1 157 2L 8072978 8072997 TTCACTTTAAAGTCGCGGAC 58 8073112 8073206 CACGATATTCTGCAATCGTATCTC 59 NA Drosophila melanogaster 61 CG33121 FBgn0053121 FBtr0079557 1 1 1 60 2L 7889783 7889803 AGACGGAACTAGTTGAATCCC 59 7889690 7889711 GAGGTATTGCTGAAGATAAGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG7179 FBgn0020880 FBtr0301151 1 1 1 60 2L 7777803 7777821 CTGCTGGGATTATGTGGTG 58 7777761 7777782 GAACTGTATGTGAAACTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15818 FBgn0031910 FBtr0079442 3 1 1 60 2L 7411009 7411027 GGATCCCTGATAGAAGCCC 59 7411047 7411069 TGGGAGGATCTGATAATAGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNP70K FBgn0016978 FBtr0079355 1 1 1 194 2L 6971496 6971596 TGTTTAAGACGAGGAACTTCAG 58 6971323 6971341 AAATCGGCCATGAACTTGG 58 NA InUTR Drosophila melanogaster 61 CG3430 FBgn0031875 FBtr0079350 1 1 1 96 2L 6958207 6958225 AATTCTGGAGCTGCTACTG 57 6958282 6958361 TGTCTCATAATCCTTCTTTGGG 58 NA Drosophila melanogaster 61 CG32829 FBgn0052829 FBtr0079370 2 1 1 60 2L 6916016 6916039 GGTCACAAGGAATTAGAATACCAC 59 6915979 6916000 TCTTCTCCTTGATGTACTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sec61alpha FBgn0086357 FBtr0079266 2 1 1 104 2L 6479052 6480042 GAGCGCAAGATCCAATTCAG 59 6478967 6478986 GTCTGAGCTCATGATACCGA 59 NA Drosophila melanogaster 61 CG16947 FBgn0031816 FBtr0079271 2 1 1 80 2L 6460476 6460570 CGTGAGATTTGGTAAGTACACC 59 6460417 6460437 CATCCATGACAATGGTACTGC 59 NA Drosophila melanogaster 61 CG9140 FBgn0031771 FBtr0079216 1 1 1 80 2L 6061110 6061194 ATGACTCGATTTGTTAAGGGTG 58 6061051 6061071 GTGTCCCTCAATTTGTTTGGA 59 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 2 1 1 62 2L 6021110 6021128 GAGCATCAACGATGTGACC 59 6021154 6021224 AAAGTTTGCTCGTACTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079173 1 1 2 111 2L 5970469 5970488 GCCCTGACTTCCATTTACAG 58 5970631 5970649 AGTCATAGCAGCTGACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Acp26Aa FBgn0002855 FBtr0079155 2 1 1 255 2L 5893863 5893883 CACTTCTTCGAAATGAACCAG 57 5893572 5893592 GCGGCAAATCAGAAATATCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079120 1 1 3 80 2L 5580898 5580979 GGCTACACAAGAAGAGCAC 58 5580836 5580857 AATAGTTCATGGTCGATAAGGG 57 NA InUTR Drosophila melanogaster 61 CG14024 FBgn0031697 FBtr0079082 1 1 1 91 2L 5313321 5313402 CAACAATCTCGTCTGGTGC 59 5313071 5313091 GATACTTCACATCGTAGCCAG 58 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 3 4 4 214 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221194 5221212 CACGATCAGCATAAACACG 57 NA DesignRelaxed Drosophila melanogaster 61 CG14034 FBgn0250847 FBtr0110802 3 1 1 80 2L 5215638 5215721 CGGACCCATTAATAAGATGGAG 58 5215579 5215597 GGTGACGAAATAGACTCGG 57 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 1 2 3 91 2L 5071021 5071111 TTTCCGGCGTAATACTGCT 59 5071234 5071253 GATTCCAACCTTCTTGGTGC 59 NA InUTR Drosophila melanogaster 61 Tfb5 FBgn0259719 FBtr0301130 3 1 1 81 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010603 5010623 GGATAATGAATTTGCGTCCCA 59 NA Nonspecific Drosophila melanogaster 61 CG15439 FBgn0031606 FBtr0077455 2 1 1 129 2L 4450354 4450782 CCAATTAATGTTCCTGCCGA 58 4450244 4450264 AGCCAGATAGGTTAATCACGA 58 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077484,FBtr0077485 2 2 2 111 2L 4187745 4187766 GGCAACATTTGTTATTGTGAGC 59 4187444 4187462 CGAGGATTTGATCCTTGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ed FBgn0000547 FBtr0077465 1 1 1 80 2L 4107790 4113627 TCGATCAGCATTTAGATTCACC 58 4113668 4113686 CGTCCTGTTCCAAATGCTC 59 NA Drosophila melanogaster 61 CG42464 FBgn0259954 FBtr0300300 3 1 1 187 2L 3699544 3699628 GAATCAGCAGATGAAATCTGTC 57 3699775 3699794 CAGAGATCTTCGCAAATTGC 57 NA Drosophila melanogaster 61 CG8851 FBgn0031546 FBtr0077526 3 1 1 81 2L 3521294 3521373 ATCAACACCTCACAGGATCAG 59 3521415 3521434 TATCTCCAGAGTCCCTGTCC 59 NA Drosophila melanogaster 61 CG33282 FBgn0053282 FBtr0113458 1 1 1 80 2L 3329337 3329430 CTGTTTCCAGTAAAGATTCGC 57 3329472 3329490 CTTCAGGGTTCCAAAGACG 58 NA Drosophila melanogaster 61 CG15403 FBgn0031504 FBtr0077661 2 1 1 60 2L 3129070 3129089 GGCATTCAAGGAGTATGGAG 58 3129110 3129130 AGAAATGACGGAAATGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17259 FBgn0031497 FBtr0077667 3 1 1 60 2L 3036156 3036174 AGCAGTTCGTACTGACCTC 59 3036114 3036134 ATCATCTCGTCCATCATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bem46 FBgn0025109 FBtr0077643 1 1 1 82 2L 2988376 2988452 CATCCTGCTGATATTCTACTATGC 59 2988493 2988511 TGGGTATGTAAATGCGGGA 59 NA Drosophila melanogaster 61 gammaTub23C FBgn0260639 FBtr0077641 2 1 1 94 2L 2973283 2973301 ACGACGACCACTACATACC 58 2973356 2973437 ATTGTAGAGCTTGGAGTAGACC 59 NA Drosophila melanogaster 61 CG3597 FBgn0031417 FBtr0077792 2 1 1 81 2L 2370665 2370683 GTGGCTCTAGTAACCGGAC 59 2370511 2370622 AATTGGACAGCTTAATCTCGC 59 NA Drosophila melanogaster 61 CG16995 FBgn0031412 FBtr0077758 3 1 1 80 2L 2308030 2308148 AGCGCTCAACAATTTGAGC 59 2308191 2308210 CAAAGTCAAGGGTTGAGCAC 59 NA Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0077866 2 1 2 81 2L 1991819 1991839 CATCAAGGACGCTGATAAGTG 59 1991620 1991778 TGCACTATCACGTTTCATCTC 58 NA Drosophila melanogaster 61 lea FBgn0002543 FBtr0077941 2 1 1 80 2L 1387006 1387120 TTCATCAATCAGCGCTATCC 58 1386945 1386964 GCCCAGGAGTATTATGAACC 57 NA Drosophila melanogaster 61 CR41508 FBgn0085791 FBtr0114244 3 1 1 80 YHet 320321 320341 TACGAAACTGGAACAGAAACC 58 320190 320282 AGCTCTTGATCATCCTTTACTG 58 NA Nonspecific Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 3 3 3 81 X 7852240 7852318 GTACGCCAACTAGAGGAGG 59 7852177 7852199 AGGCTAGAGTCTTGTACTTATCG 59 NA Drosophila melanogaster 61 CG15036 FBgn0040922 FBtr0071060 1 1 1 60 X 7318826 7318844 TGAGGCAATCCATAAAGCA 57 7318784 7318802 CCAAGGCTTAAACACTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Orct2 FBgn0086365 FBtr0084598 1 1 1 60 3R 20099548 20099567 AGTGATTCGCTCTTCATGCT 59 20099590 20099608 CGCTCAGTTGACCAAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP93B FBgn0038853 FBtr0084036 2 1 1 80 3R 16910191 16910272 ACTATCAGAGCATGTACTCCT 57 16910131 16910149 CCTACTTCATCCACATCCG 57 NA Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 3 1 1 113 3R 12308909 12308986 TTGAAACGTCTCTTCAATGAGC 59 12308817 12308835 AATCTCTTCCGGTAGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Nep2 FBgn0027570 FBtr0078891 1 1 1 80 3R 549287 549306 TAGCATGGACTACATCATCG 57 549092 549246 GACTGGTCCAGATCTATAAGC 57 NA Drosophila melanogaster 61 CG14109 FBgn0036364 FBtr0075850 1 1 1 96 3L 13434304 13434322 CTTCTCCTCAGGAACCCAG 59 13434729 13434747 TCTGTTGGAAGCAGCTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 1 3 4 80 2R 18955643 18958139 GCTCCAAATAGTGCCATGG 59 18958182 18958201 GTACAGGGTCATGTTCTTGG 58 NA Drosophila melanogaster 61 lox2 FBgn0034660 FBtr0071745 2 1 1 80 2R 17677613 17677631 TTGGAGGACAGTAACTGCC 59 17677496 17677573 GTTAATGGAAATGCCCTGATCTC 59 NA Drosophila melanogaster 61 CG15225 FBgn0034551 FBtr0071513 2 1 1 60 2R 16680478 16680498 TCTGTCAATCAGTTCAAAGCG 59 16680519 16680538 GGAAGAGTACCAGTTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080396,FBtr0080395 1 2 2 88 2L 12696303 12696321 AAAGGATCAGAGCAACCTG 57 12696373 12697478 TTCCATCGAAGATCTGCAC 57 NA Drosophila melanogaster 61 CG18301 FBgn0032265 FBtr0080094 1 1 1 80 2L 10532504 10532583 GTTCCTTAGGATACATGTTGTACG 59 10532619 10532640 GGCGTTTCGTATAGGTATTACC 59 NA Drosophila melanogaster 61 IP3K1 FBgn0032147 FBtr0079869 1 1 1 98 2L 9786715 9786733 GAGTCTACAGAGATCGGGC 59 9786795 9787160 TCTAGGGCATTAATGGCCA 58 NA Drosophila melanogaster 61 Spn7 FBgn0083141 FBtr0079470 1 1 1 81 2L 7583030 7583102 GGCAACAGGTGTTCTTACTC 58 7583143 7583164 CGGATGATCAGCTATAAACTCC 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 3 4 4 85 2L 7499871 7499889 TCAGTGTGAACACGAAGCT 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 CG15641 FBgn0030643 FBtr0074035 1 1 1 60 X 15362095 15362113 CTGTACGTCTTCAATCGCC 58 15362137 15362155 AGCAATTACCGTTGACGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 1 3 3 119 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649216 AGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 scu FBgn0021765 FBtr0074511 1 1 1 194 X 17985413 17985992 CAATGATCAAGAACGCCGT 58 17986150 17986168 CATCCTTCTCGGAGGTCAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15676 FBgn0034651 FBtr0071668 1 1 1 60 2R 17559506 17559527 CAATCCTGACAAGGAAGTTCAC 59 17559547 17559566 CACCCATCTGAATACTCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsm11 FBgn0033450 FBtr0088485 2 1 1 60 2R 5726618 5726637 TATTCTACCTCCTGAGCGAC 58 5726577 5726597 CTTTCTGCTACTAGTGGTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 3 5 5 133 2L 6924281 6924301 GTTATCATGTACGACCAGGAG 58 6924396 6924698 TTCTTGATTTCGACCTGCT 57 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290203 3 1 3 195 X 13152215 13152426 TACTACGACGGTGATTCGC 59 13152038 13152059 GCGCAATATTTGCATCTTTAGC 59 NA InUTR Drosophila melanogaster 61 CG1970 FBgn0039909 FBtr0089105 1 1 1 80 4 589786 589807 AATTCTATGAGCGAGTTTCTGG 58 589670 589748 CAAGAGGCATATCCAATGACAC 59 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787,FBtr0083872 1 2 2 80 3R 16124721 16124815 GGAAGAATCTATCTCAAAGCAAGTC 60 16124852 16124871 TAATGTGCTGTCCATTGCTG 59 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 1 2 3 80 3R 7642966 7642985 TTGTTCAGTTCGAAAGCCAG 59 7642469 7642924 TCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 Ir84a FBgn0037501 FBtr0081531 3 1 1 171 3R 3233942 3233961 CAGCTTAACGGATAAGTGGG 58 3234095 3234173 AAAGTGGATGTTCTGGGTG 57 NA Drosophila melanogaster 61 CG13564 FBgn0034973 FBtr0072246 2 1 1 107 2R 19968684 19968702 GTCACCTTGTTCTTCACGC 59 19968773 19968791 CTACTGTTGATTCCAGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 1 2 2 80 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 181007 181026 GCTGAAGCCTCTACAAATCC 58 NA Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0300075 2 1 2 60 3R 17700031 17700051 TCAATTCCAGATAGCAATGCC 58 17700072 17700091 ATTGATAGTGGATAACGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1192c FBgn0082999 FBtr0113564 1 1 1 62 X 17038248 17038269 CCAATCTAATTCTGCATAGTGG 57 17038207 17038225 TGGTGATTGTTCTGGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 r-cup FBgn0031142 FBtr0077269 3 1 1 72 X 20895719 20895827 AATGATATCAAGCGCCTGC 58 20895665 20895684 GTCGATTCGTCTTGATGACC 58 NA DesignRelaxed Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461,FBtr0070034 3 5 5 81 X 19905405 19905497 CCATAGACAGATACATCGCTG 58 19905344 19905362 AGTATCGTAAGGCAAACGC 58 NA Drosophila melanogaster 61 CG14218 FBgn0031031 FBtr0074770 1 1 1 80 X 19474952 19475036 ACCTACTGATACCTTCTTTAGGTC 59 19474895 19474914 TCAACTAAGTCTCCGCTGTC 59 NA Drosophila melanogaster 61 CG7326 FBgn0030970 FBtr0074653 1 1 1 60 X 18756513 18756531 GAACGAGGATCAACACGAC 58 18756471 18756491 GCTCATTTGATCCGTAAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9672 FBgn0030777 FBtr0074361 1 1 1 189 X 16600779 16600797 TGGAGAAGATGCCGTTCTC 59 16600517 16600535 GAGATCCACCGATCCTACG 59 NA DesignNoJunction Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 2 4 4 80 X 15975870 15975889 CAAATGAACTTTCCGTGTGG 58 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089701,FBtr0089702 2 2 2 60 X 15471334 15471354 ACAACATTGGTATTCGATGCC 59 15471294 15471312 GCTGGATGGATGTAGGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15198 FBgn0030283 FBtr0073447 3 1 1 93 X 11142657 11142675 ATATAGCACCGTCGAGGTC 58 11142732 11142750 GGTGTTGTTGGAAGACGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32667 FBgn0052667 FBtr0073474 2 1 1 171 X 11034102 11034120 TCAGTTCAAGACCGGAGAG 58 11033883 11033901 GTTGAACTTGGGACAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2145 FBgn0030251 FBtr0073387 3 1 1 81 X 10821662 10821750 CACTTTCATTTGTCAGATGCCT 59 10821792 10821810 TCTTGGTTGTCGTCTCCAC 59 NA Drosophila melanogaster 61 CG12640 FBgn0030202 FBtr0071464 1 1 1 99 X 10326590 10326608 TTGGAGGTGACTTCTGCTG 59 10326509 10326527 GATCATGAAACTCCTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0071409,FBtr0112969 3 3 3 94 X 9859486 9859629 GAAATGCGAGTTCCAGCAG 59 9859684 9859705 CTCCTTGACACTAGCTATTTCG 58 NA Drosophila melanogaster 61 Pdp FBgn0029958 FBtr0071076 3 1 1 85 X 7627515 7628064 GAGTCCATACGATGTTAACCT 57 7627450 7627468 TTTCATAGCTGCGGATGAC 58 NA Drosophila melanogaster 61 CG14443 FBgn0029880 FBtr0070949 3 1 1 60 X 6529675 6529694 GTAGAACGCCTTATGAAGGA 57 6529717 6529735 CCTTACCGGGAATATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6789 FBgn0029745 FBtr0070741 1 1 1 60 X 5026110 5026131 TGATAATCAGCTCCATATCCAC 57 5026152 5026170 AATATCCAGCTCAACGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 3 2 2 108 X 4793474 4797986 TGACCACAATTGGCTATGGA 59 4798057 4798075 CTGCTCAGGTAGACCAAGG 59 NA Drosophila melanogaster 61 CG9904 FBgn0040336 FBtr0070442 1 1 1 100 X 2515338 2515422 CATAGTGGCCATTAGCACC 58 2515486 2515504 TGATTTGCACGCTATGCAG 59 NA Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0100272 2 1 2 60 X 2499703 2499722 CGAAACGATTGATTACGCAC 58 2499742 2499763 ATTAGTTTGACAAAGTCCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 2 3 3 104 X 2038239 2038324 GTTCAAGTTCCTGAACTCCC 58 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 CG14630 FBgn0014903 FBtr0070175 2 1 1 60 X 925770 925789 CCGCTGAATATACCAGTGTC 58 925811 925830 TGATCTCCAACTGTTTCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 3 1 1 167 X 822360 822434 GAAATACTCAAGCTGGCGC 59 822627 822647 GTCGTTGAGGATTAGGTACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CR41609 FBgn0085819 FBtr0114277 1 1 1 118 U 4571102 4571120 AAGCGTTGGAATGTTCACC 59 4571202 4571220 GTACTACGCAGGAATGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42433 FBgn0259864 FBtr0300161 2 1 1 60 U 8681110 8681131 GCAATTAAACAGATTCCACCAC 58 8681071 8681090 CAAGTATTTAGGGCAGAGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40551 FBgn0085496 FBtr0302523 1 1 1 80 U 2792370 2792394 GATATACCTATCTCTGTACAAGCTG 58 2792430 2792510 GGAAATAAATACACTGCCGTG 57 NA Drosophila melanogaster 61 CG40204 FBgn0058204 FBtr0302255 1 1 1 62 U 497482 497502 ACTATCACAAGATCCTGTCGA 58 497526 497544 TTCACAACGCTGTGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 1 1 1 65 3R 21095372 21095390 TATTCGCGTCGTATTCCGA 59 21095417 21095492 AGCATAGAAAGATCTAGCCCT 58 NA DesignNoJunction Drosophila melanogaster 61 sip3 FBgn0039875 FBtr0085842 2 1 1 84 3R 27598755 27598827 GGTGGACTTTATGGAGCGT 59 27598875 27598893 TAGGATGCCTAGCACTGTG 58 NA Drosophila melanogaster 61 PH4alphaEFB FBgn0039776 FBtr0085650 2 1 1 82 3R 26310466 26310964 CTATTCTATATGAGTGATGTGGAGC 58 26311003 26311022 GTTCCCTTCTTGGGAAACAG 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 2 3 3 146 3R 25959158 25959237 GATCAGGCTCAAGAGGTCC 59 25959030 25959049 ATCTATGTCGGGCTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7568 FBgn0039673 FBtr0113306 1 1 1 80 3R 25426481 25426558 CTACTATCCGCCAGGACTG 59 25426419 25426440 AGGTCAAGTAGATCGAAGTGAC 59 NA Drosophila melanogaster 61 CG14521 FBgn0039617 FBtr0085347 2 1 1 83 3R 24752552 24752627 CATGAAAGTGGAGTCCTATAATGG 59 24752492 24752510 GCTATACACAAGTAGGCGC 58 NA Drosophila melanogaster 61 CG12516 FBgn0039577 FBtr0301672 3 1 1 60 3R 24129987 24130005 CGATGTCAATTGTGCCCTG 59 24129945 24129965 ATCTAAGGCAAAGGGATCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 2 2 2 81 3R 23455226 23455303 AGATCGGATGTTATCCTGGTC 59 23455346 23455364 ACACAAAGATGATGCCCGA 59 NA Drosophila melanogaster 61 CG13978 FBgn0039518 FBtr0085182 1 1 1 249 3R 23290751 23290820 ATAATGAAGGAGCACATGGT 57 23291032 23291050 ACCGCTTGATACTCATCAC 57 NA DesignRelaxed Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 1 12 12 80 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891688 22891709 TGCTTGCAGATTGGATTATAGC 59 NA Drosophila melanogaster 61 CG6296 FBgn0039470 FBtr0085078 1 1 1 93 3R 22830868 22830889 GAATCCTAGTACAGGACAACAG 58 22830743 22830817 GTGAATGGTGATTCTAGTTGGA 58 NA Drosophila melanogaster 61 CG4960 FBgn0039371 FBtr0084919 1 1 1 60 3R 21612873 21612891 CATTAACCGATCACTGCGC 59 21612831 21612849 TTCCAGGCTATCAAAGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL27 FBgn0039359 FBtr0084932 3 1 1 60 3R 21509980 21510001 TGAACTACAATCATCTGATGCC 58 21509941 21509960 AGCTTCTCAAAGCTGATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 1 3 3 80 3R 20699676 20699836 GGATGCTAAATACGTATGGGT 57 20699616 20699636 AAGTTGTCCAGTGGAATAAGG 58 NA Drosophila melanogaster 61 CG6028 FBgn0038924 FBtr0084186 2 1 1 93 3R 17850764 17850869 CTGCATTGGTCTGAACTACC 58 17850690 17850709 CAGGGCATTGTTAAACTTGC 58 NA Drosophila melanogaster 61 CG6028 FBgn0038924 FBtr0084186 1 1 1 92 3R 17850764 17850869 CTGCATTGGTCTGAACTACC 58 17850691 17850710 AGGGCATTGTTAAACTTGCT 58 NA Drosophila melanogaster 61 CG14298 FBgn0038654 FBtr0083695 1 1 1 105 3R 14701566 14701584 CATCCTCCTGACACAGACC 59 14701651 14702473 GCAGTTGAAATTGTTCAGCTC 58 NA Drosophila melanogaster 61 TwdlW FBgn0038487 FBtr0083415 1 1 1 88 3R 12967936 12968027 TATTTGTGACGGTTCTGATGG 58 12967868 12967886 GATGCGGTAGTTGTAACCC 58 NA Drosophila melanogaster 61 GckIII FBgn0086736 FBtr0083399 3 1 1 60 3R 12913300 12913319 ACCTGAAGTCTGTGTTCGAG 59 12913340 12913360 ATAAATAGGTCGCTCACTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4009 FBgn0038469 FBtr0083430 3 1 1 71 3R 12860535 12860553 CTTTAGATACGCCCACACC 58 12860417 12860439 GTTCTATTAGATCTCCGATTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16941 FBgn0038464 FBtr0083374 2 1 1 94 3R 12825427 12825446 CCCATTGCCAATCTGAAGAC 59 12825295 12825374 CTGTCTTTGAAGAACATTCCCTC 59 NA Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083157 1 1 2 115 3R 11334278 11334398 TAACCTAACGCAACTCTCCG 59 11334182 11334202 GCGAGAGTATGTCATTCTCGA 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 1 3 3 80 3R 11013241 11013259 GAACTGAAGTTGGCACTGG 59 11013300 11013383 CATCTCCTCATCCAACAATCTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 Aos1 FBgn0029512 FBtr0082593 1 1 1 80 3R 8259274 8259359 AATCTCAGAAACGCCTTCG 58 8259212 8259232 TGATGTTCTTGGTTATCTCGG 57 NA Drosophila melanogaster 61 CG12256 FBgn0038002 FBtr0082621 1 1 1 82 3R 8051231 8051311 CCTGTAATGGCGATTCTGG 58 8051167 8051185 AGTTCCATAGGAGACGACG 58 NA Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583 1 1 2 105 3R 5594551 5594655 GTACTATGAAGGGCTTCCTCC 59 5594722 5594740 GTTGATTAGGGCGCAAGTG 59 NA Drosophila melanogaster 61 hyd FBgn0002431 FBtr0082090 3 1 1 80 3R 5545339 5545458 CATCGTCGAATCTGGATAACTC 58 5545280 5545298 GCTCAGAAGGAGACTCCAC 59 NA Drosophila melanogaster 61 CG8199 FBgn0037709 FBtr0082067 1 1 1 80 3R 5381654 5381734 CACCTGAAAGTGATTGAAGGA 58 5381774 5381794 GAAATTGGCGTAATCTTCCGA 59 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 3 2 2 97 3R 5320656 5320736 GTGGAGGAGAATCCTCACAC 59 5320796 5320814 CTTGTATCGACCTCCTCCG 59 NA Drosophila melanogaster 61 RpL13A FBgn0037351 FBtr0078705 1 1 1 142 3R 1450228 1450615 GGTTTAACGAACAGGACCG 58 1450721 1450739 TAGAAGTGTCCCGAGAGGT 59 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 3 2 2 83 3R 240300 240318 GAGGTGGAACTGCTATCGT 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 Cont FBgn0037240 FBtr0078917 3 1 1 80 3R 211708 211783 GCCACAGGTTGAAGTATTGG 59 211824 211844 CCCAATTCCTTGTAGTACGTG 58 NA Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 1 1 1 75 3L 20447043 20447252 GCCTTGATCTCCCTTAAAGGA 59 20447286 20447307 CACTGGTTCAGTCAAATTTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058,FBtr0300057 1 2 2 81 3L 21567997 21568332 CTGGACTTGCTGAAGAAACTG 59 21568371 21568393 CCTTAGCTCCATTTGAATACACC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074854 1 1 3 105 3L 20213226 20213247 GTCTATCAAGTGAATTTGTCCC 57 20212745 20213163 CAGATCCTCATATTGATTGCTG 57 NA InUTR Drosophila melanogaster 61 CG42655 FBgn0261507 FBtr0302432 3 1 1 117 3L 19946696 19946715 TTGGATGCACAGTTATAGCT 57 19946498 19946567 AGAAGATTAAACCAGTCCGAC 57 NA Drosophila melanogaster 61 CG14101 FBgn0036905 FBtr0074950 1 1 1 60 3L 19754397 19754416 ACAATGTACCCACTAACCTC 57 19754439 19754457 GTTACCATCACCGTTCGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075043 2 1 4 63 3L 18985822 18991115 ATCATGTCCGACCAGTGTG 59 18985777 18985795 CGTTTCCGGTTCCATAGGT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RpL26 FBgn0036825 FBtr0075066 1 1 1 206 3L 18892177 18892195 TCTTTGCCATCCCTAACCG 59 18892531 18892549 CATTGTACTTCTGGCGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32186 FBgn0052186 FBtr0075172 3 1 1 80 3L 17788549 17788720 GAGTCAAGGTTCTCATCTGC 58 17788488 17788508 CCAGTATTAGTCTCCACAGCT 59 NA Drosophila melanogaster 61 CG9951 FBgn0036671 FBtr0075337 1 1 1 60 3L 16857592 16857613 GCAGGATACATGAATTCATCGG 59 16857631 16857652 AGAACTTTGTAGATATCCGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 1 2 7 102 3L 16069728 16070085 GAGAAGAGTGAAGGATATGAAAGTG 59 16070145 16070163 TGCTGGAGCTCTTTGACTC 59 NA Drosophila melanogaster 61 CG32148 FBgn0047338 FBtr0075630 3 1 1 77 3L 15016817 15016898 GCTTTAAGAAGTCCGAACCA 58 15016938 15016956 CATCTTTGCAAGGATCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10749 FBgn0036328 FBtr0075871 2 1 1 60 3L 12966573 12966593 GGAAAGGAAGGCTCTAAATGG 58 12966615 12966633 GATGCCCTTTGCGATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32113 FBgn0052113 FBtr0273390 1 1 1 80 3L 12751453 12751472 TCCTCGTAGATGCCATTCAG 59 12751512 12751744 AACTATCCATTCCAACATGACG 58 NA Drosophila melanogaster 61 thoc6 FBgn0036263 FBtr0076019 2 1 1 110 3L 12185674 12185694 AGCAAGATTGAGATGTATGGG 57 12185515 12185602 CTCGGTTTCCCTTTATGCC 58 NA InUTR Drosophila melanogaster 61 CG34241 FBgn0250825 FBtr0112435 2 1 1 216 3L 12121218 12121292 CAAATCAGCCCATCCTGAC 58 12121467 12121490 CCATTGCGTAGATAAACACTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7248 FBgn0036229 FBtr0076043 3 1 1 188 3L 11947194 11947214 CCAAGACTTTGTGACATTCAC 57 11947451 11947469 AGCCAAAGAATAAACGGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5964 FBgn0036206 FBtr0076085 3 1 1 85 3L 11784921 11784940 CAACTATGAGCAGGAGATCG 58 11784790 11784808 TCTCTACGACGGACAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32064 FBgn0052064 FBtr0076288 2 1 1 60 3L 10484825 10484844 GGACTATGAAGGTTGGACCC 59 10484866 10484885 CCTGCGAGCTAAATTCTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 1 3 3 122 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 3 1 1 61 3L 9207867 9207950 AGAGTTGTTGGTTGGTGTG 58 9207974 9207993 TAACCTGCCCAGTAGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6576 FBgn0035924 FBtr0076576 1 1 1 60 3L 8749982 8750004 GATGAGTTTACGAAATCCGATCC 59 8750024 8750042 TCAAATCAGTAGTTGGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp19 FBgn0000358 FBtr0076573 1 1 1 94 3L 8723014 8723121 AAGTTCGCTACTCTGGCAG 59 8723179 8723197 TAAGATCGCTGTCCGTAGC 59 NA Drosophila melanogaster 61 Jon66Cii FBgn0035887 FBtr0076666 3 1 1 69 3L 8386463 8386481 CTGTCTACTTCGGAGCCAC 59 8386412 8386432 ATAAAGTTACCGTTGCCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx1 FBgn0052383 FBtr0300363 2 1 1 81 3L 7431795 7431813 TCCTTCGGTACACATACGC 59 7431662 7431753 CGTACATCCTTGTTAGAATCCC 58 NA InUTR Drosophila melanogaster 61 CG13293 FBgn0035677 FBtr0077050 1 1 1 83 3L 6082557 6082636 ATTCCAGGCTGATGTCCAG 59 6082683 6082701 TTGCAGATGTAGCAGAGGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0114646 1 3 8 81 3L 5661230 5661800 CCATCTATTGAGTTCGTTCAGG 59 5661842 5661860 TTGTTGCCATTTGACGGTG 59 NA Drosophila melanogaster 61 Gr64a FBgn0045479 FBtr0073194 3 1 1 82 3L 4027951 4027971 CCAGTCTCATTCTACTTTCGT 58 4028013 4028083 CCAACGTAGTTTGTTGAAGAC 58 NA Drosophila melanogaster 61 Hsp83 FBgn0001233 FBtr0073040 2 1 1 83 3L 3193360 3194512 CATACAAGATGCCAGAAGAAGC 59 3194553 3194574 AGAATGTGTTGATGATCAGGGA 59 NA InUTR Drosophila melanogaster 61 CG12082 FBgn0035402 FBtr0073114 3 1 1 148 3L 3147614 3147632 CTATCCGGATCCAGAGCTG 59 3147423 3147442 GGTTATCTGCGTACTTCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072872 1 1 2 107 3L 2197472 2197490 AATCGTCGTCCGTTGAGAG 59 2197622 2197640 ATGATGCAGAAGAGCTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813 2 1 2 98 3L 1638853 1639058 TTCAAGCACAATGCTTGGG 59 1638773 1638791 CGCTTCCATCTTTGAGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ir62a FBgn0053971 FBtr0100014 3 1 1 60 3L 1530480 1530501 AGTAAATGGCTCTTCATTGCTG 59 1530441 1530462 CTTGCCCTTTACAATCAGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Psf1 FBgn0035194 FBtr0072731 1 1 1 60 3L 1247243 1247262 GCTTGCCCATTGATCTAACC 59 1247202 1247220 CGCACCTCGATGTAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13890 FBgn0035169 FBtr0072587 2 1 1 80 3L 851644 851662 ACGACTTGTCCCAATCCTC 59 851705 851783 GAACCATGGCCTTGAAAGTC 60 NA Drosophila melanogaster 61 5SrRNA:CR33403 FBgn0053403 FBtr0086395 1 1 1 60 2R 15635276 15635294 ATACATCGGTTCTCGTCCG 59 15635234 15635252 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30429 FBgn0050429 FBtr0072450 3 1 1 97 2R 21134448 21134467 ATCCAGTGGTACAACGATGG 59 21134527 21134603 TACCGGTTTCCATTAGCGT 59 NA Drosophila melanogaster 61 Cyp9c1 FBgn0015040 FBtr0072321 1 1 1 88 2R 20519473 20519549 ATTGATGAAGGCACTTCGG 58 20519601 20519619 TTCGATACTTCATGGCACC 57 NA Drosophila melanogaster 61 CG42360 FBgn0259742 FBtr0299959 2 1 1 83 2R 20497407 20497426 AGGAGAGGCGAGTAATAAGC 59 20497472 20497550 GAGTTGCCATGAGCAAAGG 59 NA Drosophila melanogaster 61 CG42383 FBgn0259729 FBtr0299995 1 1 1 60 2R 20311666 20311684 CTCTATCAGTATGCACGCC 57 20311624 20311642 TCATCAGGACAAAGCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3906 FBgn0034871 FBtr0072121 1 1 1 118 2R 19399189 19399207 GAGGTGCACAACTATGTGG 58 19398998 19399107 TCGCGCTTGTTAATGTTGG 59 NA Drosophila melanogaster 61 CG34424 FBgn0085453 FBtr0112725 2 1 1 85 2R 19247386 19247406 TGACCAAGTGGAACATAAAGC 58 19247517 19247535 AATGAAGAGATCGATGCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854 3 1 2 60 2R 19246244 19246263 TTTACACTGCGACGATTCAG 58 19246283 19246369 ACATCTTCAAGTGCTGAATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30192 FBgn0050192 FBtr0071967 1 1 1 85 2R 19026225 19026243 GATGAGACTGTGGCTCCTC 59 19026289 19026376 GTCATCTGATCTAAATGCTCGC 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 2 2 2 81 2R 18706463 18706938 GACAACGAAGATTTCTCGGTG 59 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849,FBtr0071852,FBtr0071851 2 3 4 131 2R 18188500 18195722 CTTATAGAAGATAAGACGCCAAGAG 59 18188393 18188412 CAACCACAATGAGGAACAGG 59 NA InUTR Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 2 3 3 80 2R 18025743 18039164 ATCAACCACTCACGATTCTG 58 18050415 18050434 AGAGACGCATACTATGTTGG 57 NA InUTR Drosophila melanogaster 61 CG30152 FBgn0034543 FBtr0086236 1 1 1 80 2R 16559168 16559255 CAGGAAACCATCTACGATCTG 58 16559297 16559315 GTAGACAACGTTGAGGTCC 57 NA Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 1 2 2 85 2R 16506650 16506668 CTGATGTCGCTGGAATCCA 59 16506716 16506795 ACAAAGCCATCTTGACAAGC 59 NA Drosophila melanogaster 61 CG10476 FBgn0034426 FBtr0086562 1 1 1 70 2R 15172266 15172288 GAGGTATCTTGGTCATACTTTCC 58 15172218 15172236 GATGAACAGACGGAGTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 3 2 2 60 2R 14547707 14547728 AGTCATTACGGAGAAGTTTGTC 58 14547598 14547619 CAATTTAAGCTCCTCGATTTCC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG30114 FBgn0050114 FBtr0086753 2 1 1 69 2R 14095518 14095537 ATAATATTCGCAACCGCTGC 59 14095569 14095587 ATCAGCAGACTGTCCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 adp FBgn0000057 FBtr0086744 1 1 1 216 2R 14040037 14040058 CAAATGTCTGGCTATAAATCCC 57 14040298 14040319 GCCATTGAACGTAAGATAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 CG33626 FBgn0053626 FBtr0290008 3 1 1 85 2R 8297614 8297694 TATACCGAAGCCAAGAGGC 59 8297740 8297761 ATTTGGCATGTCATCTGATCAG 59 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 1 4 4 80 2R 8191681 8191699 CAATAAAGCAGCATGCCGA 59 8191549 8191640 TCTCCCTTAGATCGCTTATCTG 59 NA Drosophila melanogaster 61 Sr-CII FBgn0020377 FBtr0088004 3 1 1 80 2R 8097650 8097781 AACAGCTTTAGGTCGAATTCC 58 8097590 8097610 GATGGTGATTGTGTTCTCCAG 59 NA Drosophila melanogaster 61 CG7686 FBgn0027525 FBtr0088245 1 1 1 69 2R 6726084 6726164 CAATCCAATAATGGTTAAGGGC 57 6726036 6726054 CACCAAATGGAAGGTGACC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13741 FBgn0033374 FBtr0088632 1 1 1 80 2R 4981928 4982014 GAGTCATTCTGTCTTTGGATGAG 59 4981870 4981890 CATTACTCGAGTATCGTGGTG 58 NA Drosophila melanogaster 61 CG8693 FBgn0033294 FBtr0088748 2 1 1 82 2R 4347505 4347609 AACTGGGTGATCGGTAACC 59 4347654 4347673 AGCAGGATGTTGAAGAGGTC 59 NA Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 3 1 1 92 2R 3954902 3954920 TTTCCCGTGTATGATCCCG 59 3954779 3954848 ATGCGGTGAATAATATGAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30495 FBgn0050495 FBtr0088920 1 1 1 80 2R 3545115 3545133 CTCCAATGTCTTCTCACGG 58 3545174 3545253 TGCTCTTTCTTGAAGTTCTCTG 58 NA Drosophila melanogaster 61 CG17994 FBgn0033072 FBtr0086001 2 1 1 101 2R 2096350 2096368 AAATTCCTCAGGATCGTCG 57 2095779 2095797 CGACGATGGAAAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)k14505 FBgn0021856 FBtr0081482 1 1 1 113 2L 21261706 21261781 TCTTCCAGTACGATGACGA 57 21261858 21261876 TGTTCATGGTCTTCTGCAG 57 NA Drosophila melanogaster 61 CG33511 FBgn0053511 FBtr0091451 2 1 1 82 2L 21081262 21081358 GGCAGCCCTTAAGTTTGAC 59 21081198 21081217 CGTAACCAGGTTGAATCTCG 58 NA Drosophila melanogaster 61 CG15475 FBgn0032867 FBtr0081381 1 1 1 60 2L 20615226 20615244 CCAGAACATCAATCGCACC 59 20615266 20615286 CAGATCAAAGGCGAACTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31798 FBgn0051798 FBtr0081200 3 1 1 80 2L 19395005 19395083 AATAGCCGAAATTGGCAGG 58 19395124 19395145 ATCTCCATTAGAAAGTAGGCAC 57 NA Drosophila melanogaster 61 CG31792 FBgn0051792 FBtr0081137 2 1 1 92 2L 18998785 18998806 GGACACCTTTATTCAGTTTACC 57 18998859 18998931 GCGATTCCAATCTCTTGGT 57 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 3 5 5 150 2L 18320722 18383413 TCTTAACAGATGCACTCACCT 59 18383525 18383543 TTGAGTACCTTCTGCTCGC 59 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 1 2 2 133 2L 16800513 16800611 TTCTATGACCGTCTTTGGAG 57 16800707 16800725 ATTACTCCAGGCACATTCG 57 NA Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 1 1 1 61 2L 16366513 16366534 CACAATGTGGAAATTCGAAACG 59 16366554 16366638 TTATCTTTCAGTGTCCTCACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31780 FBgn0051780 FBtr0080758 2 1 1 60 2L 15696226 15696246 CTAGGATGTGTTTCAACTGCG 59 15696263 15696516 GTCTAGGCTCCTTGATTATTAGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502,FBtr0112943 3 3 3 80 2L 15650697 15650779 TTCGCGTAACAATGTTACCG 59 15650636 15650659 CTATTGTACTCACAATACACCCAG 59 NA Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 3 1 1 62 2L 15616050 15616124 TGATGAAGAACATCGTAACCAC 58 15616009 15616027 AGGCATGAAATGGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 Acyp FBgn0025115 FBtr0080555 2 1 1 60 2L 13912435 13912453 GAGTTCAGTTCTCAGCGTG 58 13912475 13912495 CGGGCTTGATATGAAAGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 3 1 1 60 2L 11935225 11935320 AAGATAATACGCCTACTTCGC 58 11935342 11935360 TAGAAAGGAACTGGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Dnz1 FBgn0027453 FBtr0080181 2 1 1 150 2L 10855447 10855662 TTGCGAATGATTCACTCGG 58 10855315 10855333 GATTTGGACGATAGGTGCC 58 NA Drosophila melanogaster 61 CG34183 FBgn0085212 FBtr0112376 3 1 1 179 2L 9890644 9890721 AGCAGTTGAGACAACAACTG 58 9890426 9890445 TGTTTATTTCCCGCTCATCC 58 NA Drosophila melanogaster 61 CG13120 FBgn0032142 FBtr0079923 1 1 1 80 2L 9765556 9765632 TTGGGTTGTTCTGCTAAATCG 59 9765496 9765520 AGGATCTCTATGTAACTGACTATGC 59 NA Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 3 2 2 90 2L 7475791 7475811 TTTCAACGGTTGTGAACTGAC 60 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 60 NA Drosophila melanogaster 61 Spn27A FBgn0028990 FBtr0079321 2 1 1 60 2L 6672974 6672995 GATATAGATACCTTTGTGCCCT 57 6672935 6672953 GTAGATGCCATGAGAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31698 FBgn0051698 FBtr0077612 1 1 1 80 2L 3173531 3173551 TCTACTTCGTATGCAAGTCAG 57 3173404 3173489 AAAGAAGACGGGCATATCC 57 NA Drosophila melanogaster 61 CG17265 FBgn0031488 FBtr0077646 2 1 1 88 2L 3014565 3014651 CGTACCAGAACAAACTACGTC 59 3014701 3014719 CAAGTAGAGGCAGAGCTCC 59 NA Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 2 1 1 212 2L 2767929 2768069 GAAATTTGTTATCTCAGCTGGC 58 2767738 2767759 CGCTGTTGTGGTAAATAATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL48 FBgn0031357 FBtr0077882 1 1 1 102 2L 1710685 1710856 GGATTACCTGGAGTCCCTC 58 1710922 1710940 AAACCTCTGGTAGCTCTCC 58 NA Drosophila melanogaster 61 CG5565 FBgn0031335 FBtr0077944 1 1 1 96 2L 1355618 1355710 CCTTGATAGATAGCGAAGGCA 59 1355542 1355560 ATATGCTGCGTCTGATCGA 59 NA Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 1 2 2 81 2L 1052489 1052580 ACCTATCCCAAAGAGATTACCA 58 1052429 1052447 AGTTGAACCACGAGGTCTC 59 NA Drosophila melanogaster 61 Pph13 FBgn0023489 FBtr0078070 1 1 1 84 2L 578021 578160 AGCGGAGATACAGAACCAC 59 578208 578226 AACACGTCCGGATAGTGTG 60 NA Drosophila melanogaster 61 Ipk2 FBgn0031267 FBtr0078074 1 1 1 60 2L 573292 573313 ATCGACTTTGCTCATGTTTACC 59 573253 573272 CGAACATGTAGTTCTCGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BBS8 FBgn0031255 FBtr0078058 2 1 1 80 2L 424756 424836 AAATGGCGTTGATGTACTACC 59 424878 424896 AACACAGCGCTATATTGCA 58 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078136 3 1 3 89 2L 284960 285443 TCCTGGATGCGATAATTCAG 57 284890 284908 GAGGTTTCTTGGGTGTCAG 58 NA Drosophila melanogaster 61 CG11490 FBgn0031233 FBtr0078125 3 1 1 103 2L 207624 207721 CGGGAAACATCCTCTTCAC 58 207787 207806 ATATTCCACCAAGGAAAGGG 57 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0100309,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 8 8 80 2L 117755 117836 GTAGACTGAGCTTAGTGAATGC 59 117696 117715 CAATGCCGTAAATGGAAAGC 58 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416,FBtr0113415,FBtr0078163,FBtr0078164 3 4 4 82 2L 27108 27126 TCCAACCCTAGTGATGCAG 59 26956 27064 AATGGTGCTCTGTTTGTAGTG 58 NA Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300690 1 1 2 60 2L 8570 8668 CACAGGATGATAAATCGACGG 59 8687 8708 TCTTCGGTAGTTATGTGTAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415,FBtr0078163,FBtr0078164 3 3 4 81 2L 28069 28087 ACGAGTGGACTGACTACAG 58 27482 28026 AAGCTGTGAGAAACTGTATGC 59 NA Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 3 1 1 232 2L 87033 87051 CGCATCGGAATTATCAGCA 58 84077 84095 AACCTACGACTTTGAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089428 1 1 10 91 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111108 111915 AATCGAAACCTGGTCACCA 59 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 3 2 3 192 2L 132073 132091 TGTGCTCACAAGACTTCCA 59 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 3 4 5 118 2L 344388 344406 AAAGATTAAGATCGCCGGC 58 344486 344571 GCGGAGAAAGACAATTAAGAC 57 NA Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 1 2 2 81 2L 1052489 1052580 ACCTATCCCAAAGAGATTACCA 58 1052429 1052447 AGTTGAACCACGAGGTCTC 59 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 1 3 3 80 2L 1180919 1181008 GAAATACGATACTCCCGATGTG 58 1181048 1181067 TAGAGTCCTGTAACGTGGTC 58 NA Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 1 2 2 80 2L 2136631 2136735 CCAAGACCTACCAGAACCA 58 2136779 2136797 GATCCGACGAGAATTTGCC 59 NA Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 1 2 2 70 2L 2226059 2226078 TGATTCTCATGATGCAGCAC 58 2225951 2225969 CCCATGACCCTTAATGACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692 3 1 2 136 2L 2837359 2837379 ACTACGATTGGTTCCTCAAGG 59 2836170 2837204 ATGCAGAAGCACATTGTATCG 59 NA Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 2 2 2 155 2L 2850268 2850343 CACATGAAGGATCGAGCCA 59 2850131 2850149 GTGATCCTGTCCCATCTGG 59 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 2 2 2 116 2L 2975183 2975204 GTTAATGAAGACACATGCTCCT 58 2975017 2975036 CCGTTGTCATGTCATTTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 1 1 1 154 2L 3578929 3578947 CATCCACGAAAGAACGCAC 59 3578647 3578665 ACTGACAGAATCCCTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 2 11 11 80 2L 3626041 3626060 TTCAGACCATCATGATGCGA 59 3624660 3625999 CTTTGAAGATGGGCACACTC 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 1 4 4 80 2L 3780518 3780538 CCCTATTCCTGTGATATCTGC 57 3780577 3781922 CTCCTTGGAGTGAATATACCTG 57 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504 2 1 3 137 2L 3869790 3869880 CAATCCCTACAATGATCAAACG 57 3869978 3869996 GTAACTCTTTGGGCCACAG 58 NA Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 1 1 1 222 2L 4227729 4227747 TTTGGTTGCACGTTTCCTC 59 4228193 4228213 CTTCTGAATGTTGTAGTCGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 1 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343807 4343825 AGTAGAAGGCCTTCAAGGA 57 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 2 3 3 105 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034972 5035074 TCCAATAAGACCTTGACGTCC 59 NA Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 1 2 2 172 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051410 5051428 TGGGTATTGATCTGGCCAG 59 NA Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 2 2 2 173 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051409 5051427 GTGGGTATTGATCTGGCCA 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 2 2 8 93 2L 5068386 5070108 AACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 3 2 2 89 2L 5324781 5324799 TCAGTCAGTGCAATTCGAG 57 5324648 5324731 GTCTCGTTTACATTATCCTTGG 57 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 3 4 4 95 2L 5976673 5976693 GTACATTTACCTTTCCGGCAC 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 3 2 2 81 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469925 6469944 CATTCCCTTGGGATGATCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 1 3 3 101 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 1 3 3 80 2L 6721236 6721257 ACTTATGCAACAGGAACTTGAG 59 6721121 6721195 AACTTTGCAAGCGTTTGGT 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 1 5 5 131 2L 6924280 6924300 GGTTATCATGTACGACCAGGA 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 1 2 3 80 2L 7059191 7060979 AGGAGGAGAAATCCAAGAACTC 59 7061018 7061038 GATTGAGAATCTTCTCGCCAC 59 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469 3 1 2 113 2L 7385135 7385272 ACGTGCAGTTGAGTAAACG 58 7384982 7385058 CAGAACGTTTGTGACCGTC 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079458 1 1 5 118 2L 7455749 7461586 TTCACAAGGTGTTGAAGAACC 59 7455651 7455671 GGTTACAATGGTGTACATGGA 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 3 4 5 88 2L 7682044 7682122 GACATATCTTCAAGATGGAACAGG 59 7682166 7682187 GAGGATTTGCTGATTATCCTGG 59 NA Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 1 2 2 112 2L 7735203 7735334 AACTACGACGTCGATTTCG 58 7735109 7735127 TAGGACAGTCCATGTCCAG 58 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493 1 1 2 82 2L 7799364 7799382 ATGTGGACTCCGATCTCTG 58 7798615 7799318 CTGGATTAACGGTTTGCCA 58 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935 3 1 2 93 2L 8213268 8213340 AATTCCAGAGCCTGGATCC 59 8213397 8213415 ACGGCAAAGTTACTGTACG 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 1 3 9 91 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226523 8226541 AATCCAGGGTGAAGTTGGT 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 3 2 9 104 2L 8227138 8227677 CTTTATTGCAACCGGATTGGA 59 8227054 8227072 GTAACAGTGAGGACCTCGT 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 2 4 4 80 2L 9154694 9154714 CATGACAGGACCCATTAAACG 59 9154755 9156506 ACAAAGTATCGCTCCTTCCA 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 3 3 4 182 2L 9519249 9519269 TCATACTGGGTCATCTTTGTG 57 9519472 9519730 AATCGGTGATTCTCTGCTG 57 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 1 2 3 90 2L 9553927 9554007 TTCTGATGAACCTCAAGATGC 58 9553857 9553875 ATGGTGGATCTTATGCTGC 57 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0079842 1 1 3 139 2L 9617488 9617506 GATCTGCCTGATAGGTGGG 59 9617603 9621162 GCCGGAAATTCATACTATCTAATCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0100236,FBtr0079916,FBtr0079914 3 4 6 104 2L 9825640 9825658 CCTGGAGGTTAAGTTCGGA 58 9815899 9819291 TAGTCGTTCCACTCCAACG 59 NA Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 2 2 2 88 2L 10152773 10152791 GCCTCATCTATGTCCGTCC 59 10152843 10152967 TATGAGATTGCGTGTGCCT 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 7 7 84 2L 10259083 10259102 TGTTGATATGTGGCTCAAGG 58 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 1 2 2 80 2L 10440045 10440068 CCTTCATAGATGTTACTCCAAAGG 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 1 2 3 80 2L 10581364 10581435 TTCTTTCGCAAGCACACTC 59 10581302 10581320 AACCGTTCCTTGAGTTGTG 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 2 2 2 82 2L 10839575 10839595 CCACATGATTGAATGGTTCCT 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 1 1 1 60 2L 10860878 10860896 CCTATCAGAACGGACATGC 58 10860986 10861004 GTGGGTTGAGTCAAATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 2 4 4 75 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965844 10965862 CTAAATCGCTAACGCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 1 3 3 151 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262 2 1 4 137 2L 11797737 11798679 ACTTCATCTGCAAAGTTCCC 58 11797619 11797637 TGAGCGTAGAGGTAACCAG 58 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 3 3 5 83 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271637 12271656 CTGTGTATGGGACTATTCGG 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 2 3 17 88 2L 12731058 12737971 ATCTTTATGGTTCTGGCTACCA 59 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 3 2 2 72 2L 13668754 13668772 CATATTCCGTCCGGAACTG 58 13668866 13668884 CACATAGTCCTCCACAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 3 2 2 92 2L 13903705 13903790 ATCTTTACAGATCCCTCTACACC 59 13903635 13903653 CGATTTCGTGCTGGAACAG 59 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 1 2 3 80 2L 14846490 14846806 TCGGAATGGTACTTTGTTAAGG 58 14846431 14846449 CAACTCCCAGTTTGGTAGG 57 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 2 5 5 81 2L 14984074 14984208 CTAGTCATATTAATCACTCGCCTG 59 14984016 14984035 GTGAGAAGGCTTTGTATGGC 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 3 3 9 112 2L 15261796 15261815 AAATCTACGACGAATCCTCG 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823 3 1 2 85 2L 16239552 16239574 CCCTGCTATAAGCTCAATATGAG 58 16239617 16239826 GTGTACAGTTCCTCATCTTCG 58 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 3 2 2 82 2L 16505876 16505896 ACGATACGAAATCCTATCGCA 59 16505937 16506017 TAGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080906 1 2 16 80 2L 16774846 16775218 GAGATCTTCGAGTACAACGG 57 16775258 16775279 GATATGGTTAAAGAACTGCTGC 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080977 2 1 10 141 2L 17394473 17398601 GATCAATTCGGCTTATACAGATCTC 59 17398700 17398855 ATAAGATGCGCGACTTCCA 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 2 4 5 107 2L 17439291 17441812 CAATGGACTCAGATCCAGC 58 17439202 17439220 GGTCATTCTGCAATTGCTG 57 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 3 4 12 88 2L 17715907 17716689 GGTTGTTATCCACGTGACC 58 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 3 2 6 137 2L 19410631 19419876 GCCAGGATATGCTCTATTAGC 58 19410514 19410532 TAACCTGGAGTGTTGTCCA 58 NA Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 3 2 2 106 2L 19417458 19417476 AAATGCTGAAGCTTACGGT 57 19417545 19417633 ACCAAACGTATTTCCTTCGT 57 NA InUTR Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107 3 3 6 92 2L 19510636 19510654 CTATCCGGGAACCACTCTG 59 19510129 19510581 GTGTAGTTCTTGTGCGTGTG 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081352 3 2 5 172 2L 20345252 20345535 CCTGGAATCCTACGACCTG 59 20345906 20345924 CAGGACTTCTCTTAGGCGT 58 NA Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 3 2 2 81 2L 20432659 20432677 GGTCACCGAGGAGATACTC 58 20432720 20441067 GGTGTGAAGAATTTGCATGTG 58 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 1 5 5 88 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184212 21184288 CGATGAACCAACTTTAACTCAG 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 2 13 13 80 2L 21289506 21289525 TTTATACAGCCCAGTCTTGG 57 21289388 21289464 TGTGGTTGGAATCAAGTCTG 58 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085902 2 1 4 160 2L 21717651 21717671 GACCTAATAGCCACGTTAACG 59 21719634 21720131 CGGTTCAACATCGTCTTCC 59 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959 3 1 4 89 2L 21720472 21725077 CAATCTCCAGTTGCTATGGC 59 21725129 21725147 TCAATGCCGAACTTAAGCG 58 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 1 3 3 80 2L 21742826 21742844 TGAGGATGTGCTTAAGGCT 58 21742687 21742783 CACAGAAATTGTCTGAGGGC 59 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 3 3 3 81 2L 21742572 21742590 CACGGACACATGCTATGTG 59 21742266 21742530 GGGTTTGTCTTTAACAGATGGA 58 NA Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 3 2 2 133 2L 22240052 22240072 ATTATAGTCGTTGCCTCTGGA 58 22240217 22240235 AGTGGAATAGTAGGCCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958 1 1 3 90 2L 22354958 22363438 GAATTATCCTGAATGCTGGCC 59 22363490 22363508 CTGTTGATAAGGCACGGGA 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 2 5 5 80 2R 19472 19550 GTAATCACTTCAGTTGAGGTGG 59 19586 19609 GTCTAAATCAAGGAGATCGTACTG 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 2 5 5 71 2R 1491749 1491768 ATCAAGTTCGCTCCCTAGAG 59 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 2 2 5 113 2R 1492008 1492095 AAGTTTGAGTACGCATTCTGTC 59 1491860 1491879 ATAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 2 4 4 80 2R 1662571 1662645 TGCATCTCGTTACAGACTCC 59 1662510 1662531 TATATCTTGGGCTGGATACGAG 59 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 2 2 2 169 2R 1846871 1846955 CTTCATCGGAGCAGAACTG 58 1847088 1847106 ATATCAGGAGGCAGGTCAC 58 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 2 4 4 78 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515390 2515408 GTACCAGACTTAGCAGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 2 1 1 71 2R 2923895 2923913 GTTGCTTGTCATCGGAGAG 58 2924004 2924023 CTTTGGTTCTTTACGCTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 1 2 2 159 2R 3012689 3012928 GCGATGAGATCATCTTCTCG 58 3013050 3013068 AACATTGTGTCGAAGCAGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111099 2 1 59 80 2R 3237334 3237354 GAGATATCCACTAGTTTCGCC 58 3236462 3237295 TTCGATGAACTTGTACCATCTG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 3 2 59 82 2R 3247642 3247660 ATTCTCCGGGTGTATCTGG 58 3236472 3247599 TTGTACCATCTAAAGAAGGGCA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111054 3 1 59 94 2R 3249289 3249308 ATACAAGAGCTACCAGTGCC 59 3240862 3249234 AAATAGGCTCTGTGATGACCA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 2 3 59 83 2R 3247002 3247020 CACCTTAAGGGAAAGAGCA 57 3236471 3246958 CTTGTACCATCTAAAGAAAGGC 57 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 2 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911 1 1 3 93 2R 3478918 3479017 GTGGGATCCCAAGGAAGAG 59 3479074 3479092 GACCGTCGTTGATTTCTGC 59 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 1 2 3 83 2R 3592977 3592995 CGATGTTCCAGAAAGGCTG 58 3592854 3592933 TCCACTTTACTGTTTAGACCGT 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 1 3 3 101 2R 5475200 5475289 CAAGGGTATCAGGTCCACTC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 3 3 3 102 2R 5475199 5475287 CCAAGGGTATCAGGTCCAC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0088391 1 1 4 91 2R 5876801 5877986 TCCAAGGGTGAAGATCTGG 58 5878041 5878059 GAGTTGTCGTCATTCTGCG 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 3 3 5 85 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884050 5884069 CTCGTAGTCGTCAATGTTGC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 1 2 10 81 2R 5994287 5994975 TCACTTAGCTAAACAGGCGT 59 5995018 5995037 GAGTGTCGAGTCCTTGTAGG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993536 5993555 TGGCCCTTAACTTCTCAGTC 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 2 4 4 80 2R 6041101 6041325 CGCACATAGACAGGAACTG 58 6041039 6041061 CACATATAGACCAGGAATGATGC 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 1 2 2 110 2R 6628679 6628756 GTTTGGATGATGACTTCCTGC 59 6628589 6628607 AGATCCCAATCACTTGGGC 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 1 4 4 80 2R 7101695 7101780 GAAAGTAGTGATACGGATGAGTC 58 7101817 7101838 CGTCATTGATAACGAGAGTAGG 58 NA Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 2 2 2 72 2R 7157767 7159891 TCTTAAGTGGGCTCTGGTG 59 7157713 7157733 GGGCAGGTATTTGTTATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 3 2 2 73 2R 7157768 7159892 CTCTTAAGTGGGCTCTGGT 58 7157713 7157732 GGGCAGGTATTTGTTATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 1 3 3 80 2R 7174158 7174231 AGGAAATTATGGACTCACCTG 57 7174098 7174118 TTATGATGCGGGATTCATCTG 58 NA Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 2 2 2 179 2R 7263253 7263271 CACCCGATGTGATTACCCT 59 7263414 7263754 GATAGCTGTCCGATTTGCC 58 NA Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 1 2 2 89 2R 7564736 7564754 CTTTCCACGATCATCGTGG 58 7564806 7564881 CAGAAGAATCTTTCTGCCCA 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 3 2 2 143 2R 8516957 8517040 GGAGCAGTTGAATAATTTCCAC 58 8516835 8516855 TTGATCTTTGCCGATACATCG 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 3 3 6 124 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548586 8548604 AGAAGAGGGTTAGCACCAG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 3 3 6 80 2R 8766204 8766564 ATACCAAGATCCCAACCAGC 59 8766143 8766161 CCCTGAGGTGGATATCCAC 59 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801 3 1 2 81 2R 8832634 8832654 TGACTTTCAGCTTAAGGAAGG 58 8832508 8832593 TCTGGTTGAGTATCTGAACAG 57 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100453 1 1 3 142 2R 9842366 9842440 AGGAATTCCTCTTCCTGCTC 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582,FBtr0087584,FBtr0087583 3 3 3 81 2R 10037783 10037801 TAAGCGAAAGATGGACGGT 59 10037313 10037738 CTGGGCATCATTGTGAGGA 59 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257 2 1 2 88 2R 10389958 10390153 GGGAAGAATAAAGGTTTACCCG 59 10389891 10389915 CACTCTGATTGAGATAGATTACAGC 59 NA Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 1 2 2 80 2R 10558085 10558164 CGGATAAGAACACCCAGCA 59 10558204 10558226 GAACTCTAGAAATCCTATCGGGT 59 NA Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 2 2 2 121 2R 11068204 11076267 CCAACGACAAGGATCTGTG 58 11076349 11076370 CTTGGTTATCTCCTGAATGTCC 58 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 1 5 5 80 2R 11211645 11211717 GCCTGATGCAATGAAACCC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113083 1 1 5 62 2R 11443479 11443497 TTACAGGCCTAGATCGGAG 58 11449322 11449341 TGTGCGTTGAATACATTACG 57 NA DesignNoJunction Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352 3 1 2 81 2R 11455696 11455714 GGCCAACATGGGAATAACC 58 11455207 11455340 CCTCAGGTAGCCCTTTGAG 59 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 2 4 4 80 2R 11748024 11748113 CCCATGTGGTTAACAATGCC 59 11747963 11747983 TCAGGGATTTGATCTGATCCG 59 NA Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 1 1 1 60 2R 11879612 11879633 GAATACATCCTGAGCACATTCC 59 11879520 11879541 AGAATACATCAACGCACTTACC 58 NA DesignNoJunction Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258 1 1 3 171 2R 11973119 11974447 GAATCGCCAAAGGAAGGAG 58 11972892 11972910 CCATGTAGTCGGTGGAGAC 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 3 4 4 92 2R 12416663 12416686 CACTGATCTGTATAATACTTCGGC 59 12416735 12416873 AAGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 1 3 4 80 2R 12415123 12415141 ATGTGATCAACTTGGAGCC 57 12415185 12416062 TCTTGCAGTCGAAGATCTG 57 NA Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 3 1 1 69 2R 12760786 12760804 GATTGACCATACCTGGCGA 59 12760906 12760924 CAATACGGATCATTGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 1 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 2 4 4 127 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020604 14021380 AAACTTTGGCCATCCTTGG 58 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 3 2 4 106 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528687 14528971 TCAATCTTGTATCAGCACCC 57 NA Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 1 2 2 80 2R 14686294 14686595 GATTTCTTTAATTCCGAGCGCT 59 14686235 14686255 GTAGCCAAAGAAGAAACTGGC 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 3 2 2 80 2R 14745202 14745222 CATTGAAGGAACCTTATCGGG 58 14744893 14745164 TTAGATCCTCAATAACCTCTGGC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 2 5 5 84 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844995 14845243 ACTGCTAAGACTCTTGTACCTG 59 NA Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504 3 1 2 85 2R 15105662 15105680 GAGCGATCTTCTAGTCCCG 59 15108277 15110753 AAGGTCGCTCTTAGCTTCAG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 3 2 4 81 2R 15196583 15196601 TTTGGACAAGTCGCTTACG 58 15196009 15196538 CACGAAGATCACTGTGGAG 58 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 2 3 3 91 2R 15280207 15280225 GACTATTGTGAGCGCTGAG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 1 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 1 11 19 81 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 1 2 2 75 2R 16150150 16150168 AGGATCTGCTCAATGAGGC 59 16150033 16150051 ACATGGGAGTTGTCCATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100496 1 1 2 80 2R 16439322 16439410 GCAAATAATTTGGGTTCTGTGG 58 16439263 16439283 CAAGGGATTAAAGTCTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 2 4 15 149 2R 16908813 16910578 AGCAAACTGGTTGTTACGG 58 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 1 6 15 93 2R 16907282 16907300 GAATGCCACGAAGAAGGAC 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 2 6 15 94 2R 16907281 16907299 TGAATGCCACGAAGAAGGA 59 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 1 8 15 86 2R 16911249 16911490 CAAGCGAACATTCCAAATTGG 59 16911538 16911556 AAATCTGGGACTCATGGGC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207 3 1 6 169 2R 17286000 17286403 TTAACTCAATCGCGACAACC 59 17285850 17285868 GGACTCCGTATCCAGATCC 58 NA Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 3 3 3 80 2R 18025744 18039164 TCAACCACTCACGATTCTG 57 18050415 18050435 AAGAGACGCATACTATGTTGG 58 NA InUTR Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 3 3 3 81 2R 18113470 18113489 GCTATACTACACGTTGGGAG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273314 1 1 5 112 2R 18595831 18595851 GGAAACCTTCGATGATTTGGA 58 18595925 18596198 TATCTTCGGCCCTATCCAC 58 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299572 3 1 3 80 2R 18646901 18647277 GCTTTCTCGATCTAGGACC 57 18646839 18646858 AAGTGAAGAAACCTTGTTGC 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 2 3 3 62 2R 19587831 19587849 AGGCGGAGCTCTTTAAGAG 59 19587730 19587754 CTTCGTAGAATGATATGATGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 2 2 3 133 2R 19648482 19648500 TATCTGGAACGCAATCGAG 57 19647296 19648387 ATATCGAGTTTGGTTATGGCC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166 3 1 2 152 2R 19921942 19922216 GAGTACGTGTTTAGAGCGAG 58 19922330 19922349 GTGCTTTCTCAACTTCTCGA 58 NA InUTR Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 1 4 4 86 2R 19941661 19941740 CGAACAATCTATTGGACTATGACAG 59 19941599 19941617 TGTAGAGTCGCAGACTTCG 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 3 2 2 90 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299762 20299780 GAAGGGCAGAACGATTGAC 58 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 3 2 4 81 2R 20443081 20443813 CACCGATTATGCAAGAAAGAC 57 20443853 20443874 TTTCCTCTTCGGGTATTAACAG 58 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 1 2 3 81 2R 20484230 20484301 AGGAGAAGACTCTGGACGA 59 20484346 20484364 ATAAGGATCAATCCGGCGA 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072435 3 1 3 90 2R 20660795 20660813 TACTCTTACCGCCACACTG 59 20660515 20660742 ATTGTGGCTAACTTGAGCCT 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 2 2 3 82 3L 201052 201181 AGAACCTAAGAGGCCTTCTC 58 201221 201244 CAGAATTAGGTCCTCAAGAAAGAG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299982,FBtr0299984 2 2 10 151 3L 300968 300986 CTGAAAGTACGGATGTGGC 58 301100 301173 TATCATAGGTGCTACTGCCG 59 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573 3 1 2 147 3L 335094 335112 TATCTCGTACTTCGTGGGC 59 333631 334983 ACTCGAGCATCTGTTTGTG 58 NA Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604 2 1 2 93 3L 710234 710317 AGCATATTTCCCGGTTATTTGC 59 710162 710180 CGAAGATTTGACTCCGCTG 59 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 1 4 4 110 3L 1551790 1551871 TATGTGGACGAGATCGTCC 58 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123,FBtr0072807,FBtr0072806,FBtr0100219 3 4 5 64 3L 1664552 1664570 CAAGTGCCTGGAATTGGAG 58 1663996 1664014 GCGACTTAATTTCCTCCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 1 2 4 107 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878550 1881139 CATTAAAGGCCTCGAATCCTC 58 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127 2 1 2 60 3L 2283235 2297481 TACCAGTGATTGATGTAGCAG 57 2297502 2297521 CCAACACTCAAATATGCAGG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 1 4 4 80 3L 2498021 2498106 CTGGAAGATGTGAAGATAAACACC 59 2498143 2498163 TGAGATCCAGCGATTTACTCC 59 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 4 5 117 3L 2604269 2607702 TAACCATCAGAAACAACGTGG 58 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 2 2 2 106 3L 2783377 2783395 CTTGGAGAAGCGAATGTCC 58 2783465 2783746 TCTTGCGACATAGAGGGTG 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 3 2 2 80 3L 2961807 2961826 ATCCGACTCTCCTATACGGT 59 2961866 2961946 GACAATTGTCCAGATTCTGAGC 59 NA Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 1 2 2 80 3L 3043322 3043343 ATTGTGAAGCTATCATTGTCCC 58 3043383 3043453 GCATACAAAGGTGAAGTCCA 58 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988,FBtr0072987 1 2 4 106 3L 3052765 3052783 CTTTCATACTCGCCCTGGA 59 3052853 3052948 GTTCAGTAGCTCCACAGCA 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 3 5 5 82 3L 3312394 3312525 CCATATTAGGTGCCGTAACC 58 3312570 3312588 AGTGGATACCCTCGTTGTG 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 3 5 5 82 3L 3312394 3312525 CCATATTAGGTGCCGTAACC 58 3312570 3312588 AGTGGATACCCTCGTTGTG 59 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073066 2 1 3 189 3L 3326704 3327870 ACCATGCAAATCGACATGTC 59 3328021 3328040 TTAGATCCGTCAGCTTCTCG 59 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 3 2 2 98 3L 3376027 3376103 TGAGATAGATTCGCTTGTTGG 58 3376163 3376181 TTCATTTCGGTCAACAGCG 59 NA Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 2 1 1 60 3L 3805829 3805849 CACAAAGGACATTAAAGCTCC 57 3804733 3804751 TTGTATCAAACGTGGTCGC 58 NA DesignNoJunction Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0112845,FBtr0073152,FBtr0112844 3 4 4 142 3L 3829728 3829746 CTTCCGTTGCCACAATCTC 59 3829851 3831729 CATGTTGCCTCGTCTATTGC 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 3 3 6 97 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095861 4095980 GACTGGTAGTATTCCTTCATCGA 59 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 2 3 3 62 3L 4262984 4263002 AATGAATCCCTTGATCGGG 57 4263028 4263046 CAGGACCTTCCAATCATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 1 2 2 83 3L 4291805 4291887 GAAGGGAGAACATATTTCTGATGAG 59 4291746 4291764 ATTAGGAAGCCCACAAGCA 59 NA Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 1 1 1 114 3L 4622736 4622754 ATGTGGATCGCATTCTGGT 59 4623309 4623327 TTAGCCAGCAAACAATGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 3 4 10 83 3L 5538088 5538107 CGAACCGTCAGTACTATTCG 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 6 6 92 3L 6584021 6584039 TGTGAATCCTCCCAAACGT 59 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 2 6 9 159 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157832 7157852 GGAATCTTATCGTTGTTCTGC 57 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782 2 1 7 154 3L 7811314 7818693 TACTTGAACGGCAAATCCAC 58 7811179 7811197 TTGAGGTCGGCATCATAGG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817 2 1 5 104 3L 7902328 7902347 CCTATTTCACATATGCCGCC 59 7900421 7902263 GCGTTGTTATGGACATCTCTG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076771 1 2 5 147 3L 7900432 7904534 CAATCGAAGTGCGAGATGTC 59 7900304 7900322 CTCCGAGAATGTCCAGACC 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 3 3 9 138 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350938 8350957 CAAATGATGCGGGTCATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 2 5 13 118 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630553 8630571 TTCCTGGGATCGTACTGGA 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290105 3 1 5 81 3L 8927558 8927577 CGATGGCATGATCATGAGTG 59 8927400 8927515 GTTACAAGCCTGGTAAACGG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 2 5 5 82 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986077 8986096 TGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 3 5 5 81 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408555 9410758 GGCATGAATTATCTCGGCC 58 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 2 4 4 80 3L 9463472 9463490 GACGTTTACGCTCTTCTGC 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076427 1 1 2 132 3L 9492179 9492274 TTAACATAGTGGACAGCGG 57 9490255 9490273 AAGTCATTTCCAGCCAAGG 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 3 2 3 141 3L 9721700 9721819 ACCCTGGACTTTATTAGATCAC 57 9721919 9721939 GATAAAGTTGAAGCGAGTGAG 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 2 3 4 172 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856555 9856573 TGATCTCATAGACGGCTCG 58 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 1 1 1 118 3L 10883137 10883155 AAGCCAGCAAAGATGTTCC 58 10883394 10883412 ATGTCGGAACCGATCTTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 3 3 3 229 3L 11166958 11166976 TGAAGTATCTGCTCTTCGC 57 11167239 11167654 AACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999 2 1 2 80 3L 12144436 12144456 GAGTACACCATTAGCTATGGC 58 12144496 12145285 CTTGAACATCTTGACATTGCC 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422 3 1 7 106 3L 14503014 14504016 CCCTAACAAACGGAAACCT 57 14502926 14502947 GTCAGCAATCTTATCATCAGTC 57 NA Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 1 2 2 102 3L 14532077 14532095 CTACAAGGGTCTGGTTCCC 59 14532159 14532662 CACCACATACTTGTAGAGCAG 58 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0075715 2 1 3 90 3L 14623289 14623634 CAGATCTGTATGAGGGCGG 59 14623217 14623237 TGACCAGAATCGTCATCTGAG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 bmm FBgn0036449 FBtr0300190 3 1 2 91 3L 14770500 14770519 AAGGCTCTGTCGAAGATCAC 59 14770075 14770449 GATGAAGAAGTCTGATTCGACG 59 NA Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 1 2 2 80 3L 14933333 14933351 CTCTACGTCTTTGGCATGG 58 14933393 14933474 TATGTAGCTACCTCCGTTCAG 58 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 1 2 4 114 3L 15301839 15301858 CCGATTGTTCCTGCTATCAG 58 15301932 15302038 CAAGAAATACGGGTATACCCAC 58 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 1 4 4 141 3L 15505711 15505729 TCTGTACCACGATGAGGAG 58 15505834 15505911 ATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075566 3 1 2 160 3L 15576972 15577395 ATCATCATGCGACGATACG 58 15577517 15577537 CCTTTAATCCACCATTCTGGA 57 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100035 1 1 5 89 3L 15861721 15861739 AGTCCAGTTCGGATAAGGA 57 15860711 15861668 TCAGAGTGCCATTTACAGG 57 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 2 4 4 89 3L 15964324 15964402 CCATTCTAGGTCGAGGCTC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112852 3 1 7 153 3L 16058390 16058411 GTACATTCAACAACACCCACTC 59 16058520 16059131 GTCGGTTTCCTGTAATACATTGAG 59 NA Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 3 2 2 81 3L 16087580 16087599 TTATCCGTTCCTAGACAGCA 58 16087643 16087719 AGTTTCATTCCGCTTTGGT 58 NA Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 1 2 2 136 3L 16100796 16100817 CTGTCTCCGTTAAGATTACCCT 59 16100615 16100699 CAAATCAGCCAAAGCACGT 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 2 3 6 88 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109335 16110657 TGTTGGTCATAGAAGCTGCA 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 1 2 7 114 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953719 16953737 CATCTTCGTTAGCACGACG 59 NA Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 1 2 2 80 3L 17044545 17044969 CCTCAACCTGCAAATCGAG 58 17045011 17045031 ACCAGAATGCTCCTTAATTGC 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 1 4 4 80 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391566 17391587 GAATGGAGTTAGAAAGGTCAGC 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075149 1 1 4 80 3L 17991571 17991591 TCAAGTCCTACCCAGTTATGG 59 17986085 17991532 TGCCATCGAATTCTATGTTGAG 59 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 2 1 1 152 3L 18286560 18286579 CGAAGGAATCGAAGAAATGC 57 18286363 18286382 TTGTTAATATGCACCTCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 2 4 4 80 3L 18823421 18823439 TTGTGATGTACTTCACCCG 57 18823041 18823379 TAGAGTTACGAATGTCCTTGG 57 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 3 2 2 88 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259704 GAATGTACGACCGTGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 pip FBgn0003089 FBtr0075009 1 1 12 114 3L 19296135 19296225 ACGATCAGGACTGTTTACCT 58 19296040 19296064 GTTAGAGTTATATTGGTCTCTTCCC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075009 2 1 12 115 3L 19296135 19296225 ACGATCAGGACTGTTTACCT 58 19296039 19296063 GGTTAGAGTTATATTGGTCTCTTCC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075006,FBtr0075013 3 2 12 119 3L 19302780 19302854 AGTGGCCTACTACTTGGGA 59 19302679 19302698 AACTCGATCTCGTTGGTGAG 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 1 6 6 143 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684743 19684913 ATCCTCATCGACAGAGCAG 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 1 3 3 80 3L 19809756 19809833 AAGGAGATTAAGCACCTCGT 58 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302716 2 1 5 189 3L 20183912 20183930 CCTTCATCCATGATCAGGC 58 20151752 20183760 AGACTCTTCGATTTCAGCTG 57 NA Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 2 2 2 93 3L 20181854 20182104 CTGAAGCTGATCATCAATCTGG 59 20182158 20182176 CGTTTAAGTTCCACGTGCC 59 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0078222,FBtr0300452 2 2 2 90 3L 20465771 20465789 AAGAGATGTCGCTACGACG 59 20464207 20464227 CCTGCGTTCCAATTATTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 3 5 5 127 3L 21191818 21191988 AACATATGAGGGAGCACGG 59 21191709 21191727 TATGTCCACGCTATCCTCG 58 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 3 3 3 121 3L 21719351 21719370 AAATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 2 3 5 132 3L 21914315 21914334 ATGATCCGGATCTCCAACTG 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 2 4 4 88 3L 22709292 22709406 GTCAGTAAGGATCCAAACCC 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 2 5 5 85 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776575 22776594 GGTGCTCGTTCATTTGATCC 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 3 4 4 116 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561733 23561751 GAACAGAGTCAATGGGAGG 57 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 1 2 2 80 3R 240297 240315 GTGGAACTGCTATCGTCGT 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089952 2 1 10 107 3R 571642 571661 AATCCATCTCGAACCCACTC 59 570378 571572 ACGGACTCAGTTGGTTCAG 59 NA Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 2 2 2 120 3R 1062886 1062962 ATGATGACATGAGCAGCGT 59 1062784 1062802 CTGTACTGGCTTTGACCCT 59 NA Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 1 2 2 94 3R 1476894 1476980 AGTTGATTCGTCTGTGCCA 59 1477038 1477056 GAATTGCGGGAATAGGCTG 59 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 2 3 3 80 3R 1535944 1536019 GTCTTACTCCTGCATTGCG 59 1536063 1536081 TTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 2 1 1 63 3R 2167826 2167844 TAATACACATCGGACCGCA 58 2168071 2168089 CAATGTGCTGCTAAATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674 1 1 3 80 3R 2317190 2317209 AGATCCACCGGATATCTTCG 58 2317252 2318345 TTGACCGAATCCGTTTGTG 58 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 2 4 4 113 3R 4547247 4547265 ACTCAAGCCATCTCCATGG 59 4547408 4547426 GAGTCGAATGTCTCCTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 1 1 1 60 3R 4621855 4621876 CCAGATGTACGAAATGATGAGG 59 4621947 4621968 GTGATACTTCTCCAAATAGGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 3 3 4 72 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520883 5520901 CCGATAGAACTCCGACCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 2 3 3 84 3R 5590341 5590415 AACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 2 4 4 85 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525809 6525956 CGTTCAGATCGTTTATCTTATCGAG 59 NA Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 2 2 2 108 3R 6522445 6522463 GAAACAATTATGTCGGCGC 58 6523358 6523376 CCTGTTTGCGAATCTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 3 2 2 148 3R 7043275 7043351 TGAGACATGAAAGGGAGGC 59 7043518 7043537 GGAAGAGTTGATGTGCTGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 1 1 1 77 3R 7498790 7498808 CAGCCACGAGATTAATGGA 57 7498952 7498970 GAACAGTGAACGGTTAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 2 3 3 95 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595739 7595757 GGTGTGACGAGTAGTCCAC 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 1 2 6 113 3R 7628402 7631764 CGATACTCTTATGTATGGTCGC 58 7628310 7628330 TTCCTTTGCTTATCTTCCTGC 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 2 2 6 114 3R 7628402 7631764 CGATACTCTTATGTATGGTCGC 58 7628309 7628330 ATTCCTTTGCTTATCTTCCTGC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 3 4 4 76 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646919 7646937 GCTTATTGGTCCCTCTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 3 1 1 62 3R 8049041 8049061 GCGTTCTTCAGAGATTCTTCC 59 8049172 8049190 GGTCTACGATTGGCTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 1 2 2 80 3R 8180556 8180649 TGGATATAGCATCCCTTGGAC 59 8180496 8180516 CAATAGGCTGGTCATTTACCC 58 NA Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 3 2 2 97 3R 9058558 9058694 TGCTAAGACGGGAAATCCC 59 9058479 9058497 CGATCTTATCGTCGGTGCT 59 NA Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 2 2 2 149 3R 9193746 9193764 CAATACGGACAGCTTTGGC 59 9193875 9193985 GCATTATTGTAGTTGCGTCGT 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 1 4 6 134 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9203264 9203282 CTCAACCAGTTCTTCCACG 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0114374 1 1 4 80 3R 9257438 9257459 ATTTAGAAATGCAACGAGCTCC 59 9257064 9257398 TTGATAGTCACCCTGAGCTG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 2 3 8 93 3R 9488692 9488711 ATCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 2 3 5 80 3R 9582738 9582911 CATGATGTGCAGAATCGCC 59 9582953 9582973 CTGCTTCAAGTAGTCCAAACG 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 2 2 3 144 3R 10116535 10124524 ATTCGCAGTTTCAAGAGATCG 59 10124629 10124648 ATGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 1 2 2 90 3R 10132389 10132407 ATTTGGGTACACAGGTGGT 58 10132260 10132335 ATGTGAATGTTCAGCGTGG 58 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 2 2 3 80 3R 10225503 10233887 GCTATTTAGCAGAAATCGAAGC 58 10225444 10225463 CGTACATCTGTGCATATTGC 57 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 1 2 3 111 3R 10418462 10418480 ATTCTTGCAACGAGACCCA 59 10418554 10418734 GATTTGCTACTTGTTGGCGA 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 88 3R 10634007 10634092 ACGTTAAGGTGTATCTACTGC 57 10633939 10633957 GTCGAAGATGGGATTCAGC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 1 2 10 94 3R 11002129 11004015 CTACAGCCGAACAAAGAAGG 59 11001984 11002004 CCCTCAAGTAGAGACCATAGC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 3 2 13 133 3R 11127357 11127375 AGAGGAGACCTTTGAGACG 58 11128938 11129374 TGAGCAGGTCATCTTCGAG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 3 3 13 146 3R 11121255 11125838 AAATACGAAGAGGTGGCCA 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 3 2 2 82 3R 11151701 11151721 GCCCAAAGTATTGTAAATGCC 58 11151562 11151658 TTTACACGGTGAATCTCCAG 57 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112668 1 1 3 94 3R 11192307 11192393 CCATAAACGTTGAGCAACTG 57 11192232 11192250 CTCAGTGAGCTGTCTTTCC 57 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 3 2 2 80 3R 11229202 11229223 CTCAGCATGGTGTTTATATTGC 58 11229087 11229163 ATAGTACGTGGATTCATGCTG 58 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 3 1 1 205 3R 11309962 11309980 AATCGATGCACCTGAGTCC 59 11310217 11310235 CTGCGATTCGCTAATCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 3 1 1 89 3R 11672783 11672801 CATCTCGAAACTGGAGCAG 58 11672918 11672936 TAGCCCTCAGTAGTGAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 3 5 8 105 3R 11780833 11780853 GAATTACTTCTACCGCGTCTC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253 3 1 2 88 3R 11998230 12000036 TTTGTCTTCCAGCTAACGG 57 12000088 12000106 GTGTGCAACAGATCTAGGT 57 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 3 4 4 81 3R 12474342 12474429 GGTAGACATTAAACGCTATGCC 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853,FBtr0302852,FBtr0300053 1 3 4 80 3R 13044703 13044724 CTTCAAGGAATAGCCTTCTCCT 59 13044590 13044663 TCCCAAGTACTCGTATGCAG 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 2 3 4 91 3R 13044801 13044890 ATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 3 3 3 84 3R 13953370 13956130 CATTACTGGTTCCATCGAATCC 59 13956175 13956193 ACTGCAATGTGACAACACG 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083566 1 1 4 83 3R 14073861 14073945 ATGCAGGCAGAAGTAGACC 59 14073992 14074010 TTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 3 5 6 81 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 1 2 3 80 3R 15229770 15229790 CGTATCAACAAGCCTGAAGAC 59 15229831 15230032 GCGTAAAGCTTTGTGTAGGG 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 2 2 3 116 3R 15677633 15677757 CCCTGGAGAACTATGTAAACG 58 15677833 15677853 AGTTATCGTAGTTGATCACCC 57 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 2 2 5 149 3R 15842346 15842364 CATTAAGGAGCGAACGGGA 59 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 2 2 2 60 3R 15870476 15870708 TTATTTCTGCTGGGTGGTG 57 15870732 15870750 TGTTCAAACCAGTTTCCCT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089485,FBtr0089487,FBtr0089484 3 3 5 91 3R 16365050 16365133 CAAAGCGTCAAGATCCTGTG 59 16364978 16365001 TGTTCCACTAGTAGATCCATTCTC 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 1 3 5 80 3R 16367271 16367416 CGAAGACAGGATAATGTCCG 58 16367210 16367229 TCTTCGTTGAACTTTAGGGC 58 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 1 4 4 126 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 3 3 3 82 3R 16562582 16562600 GTTCCCTAGATGGGAGGGA 59 16562643 16562719 AGCACAGCATTGACATTATGAG 59 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 3 2 2 80 3R 16751813 16751896 GACAATGTGGAGATCCATAAGG 58 16751934 16751955 GTCCTCCTTGTACATGATAACC 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 1 3 4 172 3R 16881620 16881699 TTTGTTAATGGACTGGGCA 57 16881403 16881422 ACAAGGTAGAGGTTGAACAG 57 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 2 2 2 81 3R 16955074 16955160 CTTTGCATGCATGTATTGCG 59 16955012 16955032 AATGCCTGGGTATTAACAGTG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084024 3 1 16 81 3R 17031763 17033350 CAAGATTAGCTTGCCTGTCG 59 17036514 17036533 GAAGATCTGTGAGTCGTCCT 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084076 2 1 22 81 3R 17180411 17200794 ACAGAGGCTCAAGGATGTG 59 17180348 17180367 TTTGATGATTCGCTCCTGTG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084068 3 1 22 127 3R 17182684 17200793 CAGAGGCTCAAGTATGCGA 59 17182575 17182593 GTTTCGCACGTAGTTGTGG 59 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0084125 3 1 2 81 3R 17568320 17568339 CAAGATGTTTCATCACGCCT 59 17568378 17568476 CACGCTATAACGATATTTCTCCAG 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 1 3 3 80 3R 18338653 18338819 GTCGACAGATACTACGCCA 59 18338862 18338881 CAATAGCATGATGAACACGC 58 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302187 2 1 5 191 3R 18431113 18431131 CAAGATGCTGGCTGATCAG 58 18431286 18432561 ACATCGAACCATCTGTTCG 58 NA Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 1 2 2 80 3R 18902693 18907083 ACGAGGAGTTGGACAACTG 59 18902631 18902650 ATGAGTAGGTCCTGTTGTCG 59 NA Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 2 2 2 161 3R 18955121 18958731 CAAGTCAGATTCGTCGATCAG 59 18954980 18954998 ATCACTTCGCTGTAGACGG 59 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 3 2 2 89 3R 19821615 19821634 GCTATTTAAGTCGCGTCTGC 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 1 1 1 61 3R 19874123 19874141 CTTTACAGTCGGATTGCGG 59 19874221 19874242 TTGCTGACTAAGTAGTATTCCC 57 NA DesignNoJunction Drosophila melanogaster 61 cav FBgn0026257 FBtr0084556 1 1 4 191 3R 20047467 20048078 GTCAAAGAGGTTAATATGTCGGG 59 20048290 20048308 CTTTACCTCGTCCTCGGTG 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 3 4 6 120 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079743 20079761 CACAGGACGTGTTGATAGC 58 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0084602 2 1 2 101 3R 20116721 20116740 ATATGACCTTCGTAAAGCCG 57 20116865 20117242 CAATGGCAACTGTGTTGTC 57 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 3 3 18 82 3R 20521108 20521126 GACGCTGATCAAGAAATGC 57 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 1 2 3 95 3R 20677423 20677568 GAGCAACTATTGCTCAAGGAG 59 20677625 20677643 TCTGATGGGTGCCATTCAG 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 1 3 3 83 3R 20863985 20864006 GTTCAACTTCAAGGAGAATTGC 58 20862430 20863944 CTATATGAATCATGGTTGGCGT 58 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 2 3 3 80 3R 20869765 20869841 CTTTCCGGAGTGTAAATGGTC 59 20869705 20869725 TTGACTAGATCGATGACGGTG 59 NA Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 2 2 2 134 3R 21085147 21085227 TCTCACAGACCTACCAATCC 58 21085323 21085342 CATAGCACACGATGTACCAG 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0084893 1 1 4 80 3R 21449118 21449210 GTAAACAATCGCTAATTCGCG 58 21449058 21449079 GATGCTTTAGATTTGACTTGGG 57 NA Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 2 3 3 85 3R 21511213 21511297 ACTATTTGGATCACCCAGC 57 21511146 21511164 ATTCATGACGTAGCTGAGG 57 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139 3 1 5 80 3R 21735838 21735856 TTTCGGGAGCTATTTCGTG 58 21735897 21742832 TTTCGAAGTACTCATAGGTGGA 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 1 5 5 82 3R 21871476 21871494 GTGAGAAGTATCGCACACG 58 21871538 21872266 TTCATCCTCTTGCAGTTTCTC 58 NA Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 3 2 2 80 3R 22303150 22303169 ATTACTGCAAGATCGAGTGG 57 22303008 22303107 ATAAACGCTTGAGCACAGG 58 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 3 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809930 22810007 TTAAAGATTTGGCTCTCGCT 57 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 1 5 6 82 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639719 24640880 CGCTCAAACACCTTATAGCAG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299753 1 1 13 80 3R 24727253 24745225 GATTATCTAACAGCAAAGCCC 57 24745267 24745285 GTGATGGAGAATGTCTCCG 57 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 3 4 13 136 3R 24714129 24714147 CGCTAACGCAACTCTTGAG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089747 3 1 2 62 3R 25999319 25999337 TCTTCTCTGTGTTCTCCCA 57 25999116 25999134 CATCCATGAGTTGGAAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960 2 1 4 80 3R 27006809 27006827 GAGATCAACGTCGTGAGTG 58 27004474 27006766 CCTCATGTCGTAGACATTCG 58 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 1 2 4 97 3R 12571211 12571231 CCAATATGCTTCGGTAATCGT 58 12570413 12570433 CCAATGGGAAGTGATAATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 2 3 3 80 4 87361 87480 TACGGACAAGTACAGGTCG 58 87299 87319 TACCCATCTACAGTCTTTGCT 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0112657 2 1 10 127 4 113787 113805 TTTAAAGAGCGCCTATGCG 58 113895 115063 TTTGCTTCCAGGTTCATGTG 59 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 1 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 2 7 7 108 4 471122 471820 ATCGTGATCTTAAGCCGGA 58 471890 471910 GCCATAATTCCAGAATCCTCC 58 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 1 3 3 80 4 499215 499234 TAACAAACTCCCAAGTAGCC 57 498700 499174 GCTTCGTATACTGTACATCCT 57 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100395,FBtr0100396 1 2 4 80 4 728289 731554 ATGATGAATGTCACAGTGGAG 58 731596 731614 TTTGCCGTGTTGAATCTGG 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 3 4 5 112 4 1037084 1037102 GGATTGCGACACAATTGGA 58 1036235 1037014 CTGTTCTCCACTCTAAATCTAAGTC 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 3 4 8 87 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129796 1129814 TACAATGTGTTCTTGCCCG 58 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089195 1 1 3 199 4 1152575 1154509 TAATCCGAAGGCAACCTCG 59 1154671 1154690 ATGTCATTGTCGATCCACCT 59 NA Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 2 2 2 80 4 1224346 1224365 AGCTCGTTACAGTCTACCTC 58 1224406 1224999 GAATGATGGTAGCTCAGAGAC 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 3 5 5 81 4 1230676 1230694 CCAAGTAGCTCAAGTGGCT 59 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 2 1 1 197 4 488183 488204 TGTTCTAGTCGAGTATTCACAC 57 488416 488437 GGTCAGATCAATGTTGATGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 2 2 4 80 U 1352553 1352571 CAAATTCGTGGTACGACGT 58 1352614 1352685 TTGAATAACCGTCCAACCTC 57 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 3 4 4 105 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449556 3449574 GCTTGATACTGATCTCCCG 57 NA Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 2 2 2 88 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 180999 181017 TACTGGAAGCTGAAGCCTC 59 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 3 4 4 97 X 423509 423527 AATCTCTTGGAGTTCGCCA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 1 4 4 80 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 2 3 3 95 X 1376772 1376790 CGTCAACATCCTCAACCTG 58 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815 1 1 2 83 X 1571089 1571177 ACTATACGAGATTCGCCCTG 59 1571025 1571043 GATATTTGCGTGGTGACGG 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 1 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643805 CATAATTATCGCTTGTCCGGA 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 78 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962427 1962445 ACTTGGACTGGTAGGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 1 1 1 103 X 2221590 2221608 GAGGTCATGTAAGCTGCTG 58 2221846 2221864 TCACCGGTTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 2 1 1 104 X 2221589 2221607 TGAGGTCATGTAAGCTGCT 58 2221846 2221864 TCACCGGTTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091965,FBtr0070451 3 3 8 80 X 2385221 2385242 GATACGTTCAAATCGCATACGA 59 2384860 2385183 GATCCAACGTCGTTATCTAGTC 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 3 7 12 81 X 3215179 3215197 ATATCGCTCCGATTCGGAC 59 3215239 3219969 TTCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 1 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific Drosophila melanogaster 61 cib FBgn0026084 FBtr0070641,FBtr0070639 3 2 3 97 X 4004036 4004195 TAAGGAAGCCATCGAGCAG 59 4004256 4004274 TCTCATTGGTCTCGGTGTG 59 NA Nonspecific Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 2 4 4 153 X 4598142 4598235 CAACAACTACGGAATGGGC 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0299588 1 1 5 100 X 5138074 5140564 ATTGCCAAAGAGCGTTGAC 59 5140626 5140646 CATCGATTAGAATCTCGCTGG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 3 5 7 103 X 5277589 5277610 CTCTAATGACAATATGTCCGGG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 2 2 2 118 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567274 5567292 CATCACAATGTAGACGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 1 3 3 98 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616641 6616659 CATGAAGCTCAGCATGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 2 3 3 119 X 6649036 6649054 GTGATGAACAACATTGGCG 58 6649136 6649215 GAGAATAGAACTGATGCCGT 57 NA Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 2 3 3 119 X 6649036 6649054 GTGATGAACAACATTGGCG 58 6649136 6649215 GAGAATAGAACTGATGCCGT 57 NA Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 3 2 2 161 X 6905758 6905776 GATCAATTGGACAGTGGGC 58 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 2 2 2 105 X 7126724 7126743 CCAGCGGATCTAGGATACAC 59 7126810 7126960 GTGGTATTGTCGTTCTCGTC 58 NA Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0300836 3 1 2 124 X 7609091 7609109 GGGATAACGGAGAGTGAGG 59 7608506 7608524 CTGTCCTTCATTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168 2 1 3 173 X 8137928 8137947 CTATGAACTTGACGGGACAG 58 8138083 8140135 CGTAGGATCCTCCTTTGGT 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 2 2 6 93 X 8917820 8918117 TGGATTCAGCCCTATACTGG 58 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 3 1 1 82 X 9001227 9001245 ACTACTGCGTGGTAATCCT 58 9001358 9001376 GTTACGCGTAAACGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071294 2 2 6 116 X 9003012 9005127 AATCGCAGATTTAATCCAGCC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 2 1 1 64 X 9103492 9103510 AAGAAGAGCTTCACCTGCA 59 9101085 9101104 GAGATGAAGGCACCTTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071409 2 1 3 141 X 9859799 9859882 CGATTGTAGCCTAGACATTGAG 58 9859984 9860002 AACAAAGAACGGTTCCACG 59 NA Drosophila melanogaster 61 CG2972 FBgn0030177 FBtr0071430 3 1 1 152 X 9977331 9977349 CTTTATAAACGCCGTGCCC 59 9977524 9977542 TTAATGCTCTCCGGACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073489,FBtr0073485 2 4 15 112 X 11284561 11289280 CAATCTGGATTCGGTGAATGG 59 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 3 4 4 164 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444962 11445074 AGCTTCAATCCATCTTCTATGC 58 NA Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 1 2 2 80 X 11616429 11616572 GGAGCGATTTAAGATCGCC 58 11616616 11616634 TCCGTACGCTCTACAACTG 59 NA Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 3 2 2 83 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924719 11924737 CTGCTCAAATGGAATGCCT 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 3 6 7 118 X 12168166 12168184 TGGCAATTGCCAGATAAGC 58 12168265 12170555 CTATGTGAAACCTGGATGGC 58 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 2 2 3 80 X 12329314 12329332 ACAGAAGACCAGCAATTCG 58 12329375 12330062 CTCTGTTTGTAGCGTGTCTC 58 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558 2 1 2 102 X 12358561 12358579 ATATCCAGCGATCTGAGCG 59 12358645 12359292 CAAAGGAGACGCGTTTGAG 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 2 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 2 3 10 80 X 13488930 13489045 TTCGAGGGTGGCTATAATACG 59 13488870 13488888 GCGCTGAGTGAATCTTTCC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 1 2 5 80 X 13544087 13546918 ATACCTGTATCAAGATCGCGG 59 13546960 13546978 CGAGGACGCCGATATTAGG 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 2 2 5 80 X 13544085 13546916 CGATACCTGTATCAAGATCGC 58 13546958 13546976 AGGACGCCGATATTAGGTC 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303 3 1 4 80 X 13702513 13702832 AAATACAGATACCAGCTCCCA 58 13702872 13702892 GTGGGTAGAATTGCTAATGGT 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073951,FBtr0073949 2 5 8 80 X 14820836 14820854 TTGGAAAGAGCGTCAAGGA 59 14820897 14824788 TAAGCGTTCCCAATATGGCT 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 2 2 8 99 X 14818434 14819687 CAAGATCATGAAGTCATCTTCG 57 14820828 14820846 GCTCTTTCCAAGGAATTGC 57 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 3 4 4 81 X 15230530 15230550 CTGATCATCGACTACGATGTG 58 15230592 15230664 TGGAGAAGTAAACCACCCTG 59 NA Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 1 2 2 109 X 15411715 15413956 CGATACAGGTTCACCCTCTC 59 15411625 15411643 AAGGAGCTAGAGATTGGGC 58 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 2 5 5 165 X 15688454 15688537 GATCCACGTAACAAAGTTCCA 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 2 5 9 133 X 15714507 15714525 GAACCAGGAAGCAAGTCAG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074111 1 1 6 85 X 15754282 15754303 GTGTAAGTAACGTATTGTCGTC 57 15754346 15755184 CTGCAGAAAGTTCATAGATCAG 57 NA InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215 3 1 5 101 X 16175214 16175233 ATATTTGTTGAGGAGGCCGA 59 16175294 16175480 TACCCTGATCTTAAACTCGACG 59 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 3 2 2 143 X 16605606 16605698 AGTTTCGGTTCTCTGGACC 59 16605805 16605823 GAACCTTACAGAATCGCGG 58 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 2 4 4 294 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198373 17198391 AGCCATTTGAAGTGCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 1 2 2 142 X 17314084 17314102 ATGGTGAACTTCCATCACG 57 17313900 17313979 CCATGTAGTTTGAAGAAGCG 57 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 1 3 4 112 X 17743835 17743950 CTTGAACAAGTCCCTGGAC 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 1 3 4 112 X 17743835 17743950 CTTGAACAAGTCCCTGGAC 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 2 3 4 176 X 17767426 17771465 ATAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 1 3 8 97 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824462 17824629 AATGTTGACCTAGTGCACCA 59 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 3 3 8 99 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824460 17824628 CAAATGTTGACCTAGTGCACC 59 NA Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 2 2 2 81 X 17990414 17990432 CTGCGCGAAATCAAGAGTC 59 17990475 17990557 CGGTTAACAACCACTGATTGG 59 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 3 3 3 108 X 18461161 18461553 GACTACTTGAGATTGTTTGGC 57 18461621 18461641 ACTCCAAGTGATAGACATTGG 57 NA Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 3 2 2 80 X 18550297 18550368 CGCATGTTCATGATCTTCG 57 18550235 18550253 GGTGAAGATGAAGGTGGAG 57 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 3 6 6 154 X 19417821 19417839 GCACAAACACGATCTGGAG 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 3 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 2 3 3 80 X 19795513 19795912 CGTATATGGAATATCCACCGC 58 19795952 19795972 CAATATGAGGCCCAGTATGGA 59 NA Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839 1 1 3 85 X 19793929 19793947 GTCTTTCACGTTCCTGCAG 59 19793994 19794657 GATAGTAACCTCTTCCCAGCA 59 NA Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 2 1 1 215 X 20044243 20044264 TCTATAGAGATCCGGTCTACAC 57 20044801 20044819 GATTGTCCTTGCACTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 3 1 1 65 X 20911412 20911432 GTGGTCAAGTTTCTCGAACTG 59 20911142 20911161 GTTGAAGCTGTAGAAGTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337 1 1 2 109 X 375535 375644 GTAGGAGTAGATTGTCTGCCC 59 375446 375464 TAGCATCTGATCAGGCTGC 59 NA Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113717,FBtr0302542 1 2 3 80 XHet 71078 71099 CATTATTAGCGTCAGGATATGC 57 69218 71037 TAGTATCGTCGGATCTGGG 57 NA Nonspecific Drosophila melanogaster 61 snoRNA:Me28S-C2645c FBgn0082936 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-2b-1 FBgn0046824 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG13235 FBgn0040766 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Eb FBgn0011893 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30155 FBgn0050155 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31578 FBgn0051578 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135c FBgn0083010 FBtr0113573 1 1 1 61 X 17040396 17040414 CTCAATGCCAGTTGATGGT 58 17040353 17040377 CCTATGAGTCCATTAAGAGTTATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1854b FBgn0083041 FBtr0113569 1 1 1 62 X 17039684 17039702 ATCCTTACAGGGTTGTGGT 58 17039640 17039661 AAGAGGAATAGCTAATCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 1 1 1 66 X 21192844 21192947 CTACTTCCTGGACGTGGTC 59 21192796 21192814 GTAAATCTCCATGCTGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14581 FBgn0040645 FBtr0077186 2 1 1 60 X 21126485 21126504 CGATATTCAAACGATCGCAC 57 21126525 21126545 TCTGGTTATCACCATTTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077275,FBtr0077273 3 2 3 63 X 20804407 20804427 CCAATTTGAGAATGGTCAGGA 58 20804274 20804382 TTTCAGAATGCCCAACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 l(1)19Ec FBgn0001560 FBtr0299922 1 1 1 60 X 20753098 20753121 CATAGTAATCGGAATAATCGACCG 59 20753061 20753080 CCAGATCATCCTTATGCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32506 FBgn0052506 FBtr0300211 3 1 1 81 X 20335195 20335214 ATATGGATGCCCTACAGCAG 59 20335257 20335831 AGGAGTTCGCTACTGTAGAC 58 NA Drosophila melanogaster 61 CG12655 FBgn0031080 FBtr0070036 3 1 1 243 X 19853353 19853372 TCATTGTTATCGGATTGGCA 57 19852729 19852747 GTACCGCTCACGTAGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074815 3 1 3 75 X 19635234 19638315 CGTACTCTCGTAACAACAAAGTC 59 19635181 19635199 CTGTCTGACGATTTGTCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 2 1 1 222 X 19573363 19575882 CATCAACGGAACAGCAGTG 59 19573159 19573177 GTTGGTCGGATGATAGACG 57 NA DesignNoJunction Drosophila melanogaster 61 Sec61gamma FBgn0031049 FBtr0074745 3 1 1 187 X 19537482 19537903 CTGAATTAAAGCGGAGAATCCC 59 19538051 19538069 GATGAAGCCCATGATGCAG 59 NA InUTR Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 3 2 2 70 X 19512302 19512320 TGGATAATCTCAGCCAGCG 59 19512188 19512206 GAACTTGGTAACGCACCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 out FBgn0259834 FBtr0074682 3 1 1 92 X 19205651 19205735 CAATTCTTGGTATCTTGACGGA 58 19205580 19205600 CTAACCAAAGGAGTAAAGCCA 58 NA Drosophila melanogaster 61 CG42450 FBgn0259927 FBtr0300218 1 1 1 84 X 18715494 18715631 CATATGCGTTTATGGGATACGA 58 18715676 18715694 TTAGCAATGTTGAGGGCCT 59 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 2 2 4 232 X 18691377 18691395 TCTAAACCAACGTTAGCCG 57 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616,FBtr0301545 3 2 2 100 X 18534440 18541237 ACTGTAGTGTAACGGTGCA 59 18534358 18534377 GTACTTCTCCTTGCCCAGAG 59 NA Drosophila melanogaster 61 Arp8 FBgn0030877 FBtr0074544 3 1 1 116 X 17754683 17754769 AAAGCAAACGATGCAACGA 59 17754585 17754603 ATAATCTTTGGCGCCTCCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 2 4 4 102 X 17743515 17743535 TTCATAATCATCTGGCTGGTG 58 17743365 17743451 ACTTGTAGACCAGCCTAGG 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 2 7 7 60 X 16579563 16579581 TGATATCCACGCACATGCA 59 16579425 16579443 AAGTTCTCGTAGTGCACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9906 FBgn0030755 FBtr0074299 1 1 1 60 X 16418721 16418742 CAATGACAAGACACCCTATACC 58 16418682 16418700 TTTCAAATTGTTGCCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34015 FBgn0054015 FBtr0100070 2 1 1 115 X 16341988 16342074 CGATTCTTTGGTGCAGCTC 59 16341891 16341909 GCTTCACCGTGATAAACGG 59 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 2 3 3 125 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281649 16281728 GATGCCTTGGTGTAGAAGC 58 NA Drosophila melanogaster 61 CG9917 FBgn0030740 FBtr0074237 2 1 1 60 X 16216134 16216152 TTCCATCAAGTGTGGACCC 59 16216092 16216110 TTTGTAGAGCGAATCGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9917 FBgn0030740 FBtr0074237 1 1 1 60 X 16216683 16216701 CAGGAGATACAGGAAGCGT 58 16216641 16216660 TGCAGTACTTGTTGAAGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 2 5 5 80 X 15749870 15749890 CTATAATCGCGTTGGAATGGA 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG8119 FBgn0030664 FBtr0074051 1 1 1 60 X 15556636 15556656 AAGTATCCGACCAACAATCTG 58 15556678 15556696 ATGGACGAAGTGCAATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0112985 2 1 2 152 X 15075223 15075241 GATATGACAGTGGGTCTGG 57 15075355 15075452 TAAAGAATCCGTCGTAGTCAG 57 NA Drosophila melanogaster 61 CG32598 FBgn0052598 FBtr0073918 1 1 1 128 X 14211092 14211111 TTCATTTGCAAAGCACAGAG 57 14210929 14210947 ATTTCTCTTGTGCTTGCGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL38 FBgn0030552 FBtr0073902 1 1 1 89 X 14121097 14121115 CACTTACTGGACCCTGGTG 59 14121167 14121241 GGTATGTTGGCAATGAACCA 58 NA Drosophila melanogaster 61 CG11068 FBgn0030536 FBtr0073854 1 1 1 156 X 13849699 13849786 ATACGATTCGCAACGTCAC 58 13849906 13849924 CTTGTAGGACTCCAGGGTG 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 2 3 10 121 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488910 13488930 TCTAAGGTTTCCGCATAGACC 59 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202 3 1 3 223 X 13152251 13152398 CGCTAACTTTCTTTCGATGC 58 13152047 13152066 TTGCATCTTTAGCATGTCCA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33651 FBgn0053651 FBtr0091628 1 1 1 60 X 12785771 12785789 CAGACGACCTTAAGGAGGG 59 12785729 12785748 AAATGTGGTTTGCTCCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 1 2 2 218 X 12661317 12661335 ATCGTGTCGTTCAACTCGA 59 12663853 12663961 GATGTTGAACATGCCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1924 FBgn0030377 FBtr0073634 2 1 1 60 X 12070978 12070996 GAATGGAAGTTCAAGGCGG 59 12070936 12070959 CAGTGTTAGATTCCTTAGTCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10362 FBgn0030358 FBtr0073590 1 1 1 80 X 11823534 11823756 TAACGCTTAGGGTCAAACAG 58 11823473 11823491 AACTAATTGACCAGTGCGT 57 NA Drosophila melanogaster 61 PGRP-SA FBgn0030310 FBtr0073509 2 1 1 85 X 11456304 11456383 TTAGTTACAACTTCCTGATCGG 58 11456429 11456447 GTATCCATAGGTGTGGGCA 58 NA Drosophila melanogaster 61 CG1749 FBgn0030305 FBtr0073505 2 1 1 124 X 11377875 11377893 CATCGTCAAGGACTACGAG 57 11378090 11378110 AGTCGAAGAGTATCAGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497,FBtr0073498 3 2 2 60 X 11338678 11338699 ACTTTGTGATGTACTCCTTCCT 59 11338716 11338738 TCTATATCGATGTCGGCTATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497,FBtr0073498 1 2 2 60 X 11338242 11338262 ATCCTACTGAATCCGAAATCC 57 11338284 11338302 CCACCTGTTTCTGGAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1394 FBgn0030277 FBtr0073467 3 1 1 61 X 11064510 11064528 TTCGTACTGGAATGGCCAG 59 11064467 11064485 GCATGAAGTCACCCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299514 3 1 2 87 X 11001882 11001900 GGTCGTCATGGAGTACCTG 59 11001950 11002027 GTCGAAAGGACCAAACTCTG 58 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 3 2 2 151 X 10983473 10983559 ATTCCTTATCGACCCTCGG 58 10983674 10983692 CTATCCTCCCAGAGTTGCA 58 NA Drosophila melanogaster 61 CG32676 FBgn0052676 FBtr0071503 2 1 1 81 X 10611422 10620968 TGGAAACTGGTTTATTGGCTC 58 10611361 10611379 TCATTAACCTGTGCGTCGT 59 NA Drosophila melanogaster 61 CG15307 FBgn0030192 FBtr0071442 3 1 1 80 X 10238023 10238042 AGGCGTAACTACGATATGCA 59 10238084 10240895 CGACGATCGGTAATTAAGCC 59 NA Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 1 2 2 154 X 9823329 9823347 CTTCAGCGGTGATCATGTC 58 9823079 9823212 CATCGAAGAACAGCGAAGAG 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 2 3 3 80 X 9566936 9566955 GTTTACACCTGCAACCACTG 59 9566813 9566897 GATACACAGATCGAAGTCATCAC 59 NA Drosophila melanogaster 61 BCL7-like FBgn0026149 FBtr0071358 3 1 1 80 X 9251289 9251606 TCTAACACCTGTTTCTCCGTC 59 9251647 9251666 GTTCGAGTCCTCAGAGAAGG 59 NA Drosophila melanogaster 61 CG7065 FBgn0030091 FBtr0071299 2 1 1 114 X 9038972 9040050 CCTTCAAAGGTACCAACGA 57 9040128 9040146 AAAGCATTGGCCAATTTGG 57 NA Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 3 1 1 67 X 9001544 9001562 TGATTCCAACGACAGGGAG 59 9001590 9001729 GTTCGTTCTTGATCATCTTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071352,FBtr0071351,FBtr0114596,FBtr0114594 1 5 5 119 X 8996256 8996535 CAATCATGGTGAACCCGAG 58 8996155 8996173 ACATGGATGACACTAGCCG 59 NA Drosophila melanogaster 61 Sptr FBgn0014032 FBtr0071241 3 1 1 60 X 8357887 8357907 CCAAAGTTGGTGGTTAATCTC 57 8357847 8357866 GTGCCATCGAGGATATAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071129 1 1 2 80 X 7839972 7839991 GAGGATCGATCTTCCAACAC 58 7837243 7839931 AATTTGATCGGTAGACACCTC 57 NA Drosophila melanogaster 61 Ir7b FBgn0029965 FBtr0071149 1 1 1 95 X 7760240 7760261 TCTAAATTTCACTGTGGGTCTC 58 7760113 7760184 TGGCCAAAGATCTCATCGA 58 NA Drosophila melanogaster 61 CG12155 FBgn0029957 FBtr0071071 1 1 1 80 X 7623395 7623704 CAGCAGATAGGAAACAAGTACAC 59 7623744 7623762 ACGGTACTGGTGGAAAGTG 59 NA Drosophila melanogaster 61 CG1958 FBgn0029940 FBtr0071046 2 1 1 60 X 7161249 7161271 CAGTTAATCGAATGGTTGAGGAG 59 7161291 7161309 CCCTTGGTCAAGTGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0071005 3 2 3 153 X 6894182 6894202 ATCTACAAGGAGGTGATCTCG 58 6896822 6896843 GTCTTATCATCGTCTTAACCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4095 FBgn0029890 FBtr0070955 1 1 1 97 X 6576445 6576546 ACACCAACGAGGTGATCAG 59 6576606 6576625 CGACTTGTTCACATGATCGT 58 NA DesignRelaxed Drosophila melanogaster 61 PpV FBgn0003139 FBtr0070921 2 1 1 93 X 6266745 6266763 CTGCGATATCCTCCTGGAG 59 6266582 6266688 CTCCAGGTCGTAGAACTGG 59 NA Drosophila melanogaster 61 CG42240 FBgn0250869 FBtr0290308 1 1 1 60 X 6225563 6225584 GAAGTTTCATTTGCGTTTGGTC 59 6225605 6225623 CTTACCGCTATCCTTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vanin-like FBgn0040069 FBtr0070879 2 1 1 80 X 6094737 6094755 TGCAAGATAGTTTGCTGCC 58 6094612 6094695 CTTGGACATAGCTATCTTCCG 58 NA Drosophila melanogaster 61 CG4666 FBgn0029838 FBtr0070887 3 1 1 103 X 5971008 5971379 GACTGCAAATTGGGAATCCA 58 5970924 5970944 GGATGAAGTAGTTGACATCCC 58 NA InUTR Drosophila melanogaster 61 CG3108 FBgn0029807 FBtr0070833 1 1 1 128 X 5673281 5673375 CAAATATGATGGCCAACTGTG 58 5673173 5673191 TTGTCGATCAGAACGATCC 57 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 2 2 2 101 X 5567068 5567086 AGAAGGAACTCACCAAGCA 58 5567151 5567251 GGATCTTGGAGAGCTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG6903 FBgn0029737 FBtr0070723 2 1 1 80 X 4813557 4813575 TGAGTTCGGCATATTCGCT 59 4813619 4813942 AGAGCGACGAGACATTGTC 59 NA Drosophila melanogaster 61 CG4041 FBgn0029736 FBtr0300998 1 1 1 82 X 4810513 4810585 CAATGAAGAGTTGGCCTTCC 59 4810450 4810468 CCGCCGAATTATCCTTGAG 58 NA Drosophila melanogaster 61 mRpL30 FBgn0029718 FBtr0070682 1 1 1 103 X 4542117 4542215 TACTATCCCAGGACTCCCG 59 4542282 4542300 TTCTCCCAGTAGGGATTGC 58 NA Drosophila melanogaster 61 CG12684 FBgn0029717 FBtr0070697 3 1 1 69 X 4465668 4465688 CGGATTCGGAACTTAATTCAC 57 4465567 4465585 ATGCTATCGCTAGAGGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12693 FBgn0029705 FBtr0070654 3 1 1 110 X 4221737 4221756 GAACGATCAAATGTCGGTGG 59 4221583 4221665 CGGTACCTTATCTCCAGGTG 59 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 1 2 2 80 X 3791669 3795149 TGAGTCTCGATGATGACTACG 59 3791609 3791633 GATCAATAATCTCCAAATCCGTCTC 59 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 2 1 1 165 X 3783560 3783726 CTCTTTGGATTTGCCGCTG 59 3783853 3783873 AACTAAAGCCACCGTAATCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3598 FBgn0025645 FBtr0070552 2 1 1 64 X 2831550 2831570 GAAGCAGATGATGGTTAACCG 59 2831596 2831614 TCTCGATAATGCCATCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 3 3 3 81 X 2243028 2243046 GTAAGCTCTTGTCCCTCGT 59 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 Mct1 FBgn0023549 FBtr0070393 2 1 1 80 X 2092962 2093859 TGATACACATAGTTACCGATGG 57 2093900 2093918 TGCCCTCGTTGAAATAGTC 57 NA Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 3 2 2 120 X 1814951 1814969 GACAACGTACTAGTGGCCA 59 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 CG14812 FBgn0026090 FBtr0070372 2 1 1 98 X 1752662 1752680 CATCGGAATGGCCATTTCC 59 1752428 1752601 ATGACACAGCGTTTGTTTCC 59 NA Drosophila melanogaster 61 CG14631 FBgn0029552 FBtr0070172 3 1 1 81 X 906281 906299 CTCTCGACATCGGAAACCT 59 906344 906362 TATTCATCCGGTCACCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3713 FBgn0040343 FBtr0070195 3 1 1 60 X 741107 741125 CTTCTTGGTGGATCTGCTG 58 741065 741085 TGGGAATTCCATCATACAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070129 2 1 8 91 X 550760 551139 CGTTTGTTATCTTTGAAAGCCC 58 551190 551209 ACTTGGCGATCTGGATATCC 59 NA InUTR Drosophila melanogaster 61 Cyp4g1 FBgn0010019 FBtr0070099 2 1 1 60 X 362979 362998 CAACAAGTACGGAGAAACCA 58 362938 362957 GGTTAGAAACACCAACAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40508 FBgn0085740 FBtr0114190 1 1 1 62 U 9602785 9602803 CTGTTCTACGACAGAGGGT 58 9602829 9602847 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42430 FBgn0259861 FBtr0300158 3 1 1 60 U 8078800 8078820 GACGATGACTTCTTTGAAGTC 57 8078760 8078778 TTTGTTGCCAGTTCACTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR40820 FBgn0085523 FBtr0302336 1 1 1 86 U 7044693 7044711 GATACACAGCCATGTTCGG 58 7044625 7044643 CTTACCGTGAGTCGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42413 FBgn0259844 FBtr0300142 2 1 1 67 U 6604894 6604913 CAACTACTTTCAGGACACGT 57 6604846 6604864 AGGATCACTTCCAGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40530 FBgn0085494 FBtr0302228 1 1 1 93 U 8029859 8029934 TATTCTGCGCAACCATTGG 58 8029784 8029802 CAGAGTGCATTCTGTGCTC 58 NA Drosophila melanogaster 61 CG41527 FBgn0085670 FBtr0302258 3 1 1 64 U 3398178 3398198 CTACAAATCGTAGACCATGCT 58 3398218 3398242 CTCTATTGAGTAATATTGCCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40378 FBgn0058378 FBtr0302337 2 1 1 80 U 72384 72404 CGTGTACAGATAAACGACTCC 58 72443 72738 ATCTAAATATCCGGAAAGGCTC 57 NA Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 2 1 1 80 4 488300 488377 TGCATGTGTTGGGTATATGTC 58 488416 488437 GGTCAGATCAATGTTGATGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 1 1 1 80 4 488300 488377 TGCATGTGTTGGGTATATGTC 58 488417 488437 GGTCAGATCAATGTTGATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 mir-34 FBgn0064158 FBtr0082178 2 1 1 60 3R 5926683 5926701 GGTTAGCTGGTTGTGTAGC 58 5926725 5926743 GCAGTGAAGATAGTGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 1 2 2 162 3R 12677052 12677070 TTCCTATCGCCACTCACTG 59 12677196 12681548 ATGGATGTCCTTGGTCCAG 59 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 1 2 4 80 3R 12570417 12571157 AAGCACATTATCACTTCCCA 57 12570356 12570374 GAACCACAAGTACAGCACC 58 NA DesignNoJunction Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 1 2 2 112 3R 26877547 26877565 TTTAATGGTTACGCGCTCC 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 5-HT7 FBgn0004573 FBtr0085746 1 1 1 89 3R 26841948 26841968 AAACGACTTCGAGAAGAAAGC 59 26797651 26797669 TATGTGATTGTCGTCGGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pka-C2 FBgn0000274 FBtr0085727 1 1 1 80 3R 26521699 26521717 GCCCTCATACTTTACGTCC 57 26521575 26521657 GAGTTTCCTAAACGCTTTGAG 57 NA Drosophila melanogaster 61 PH4alphaPV FBgn0051015 FBtr0085670 1 1 1 80 3R 26473917 26474026 CAGACCGTAAGAAGGAGCA 59 26473855 26473876 ATTGGATAAGTACTCCTCCGTG 59 NA Drosophila melanogaster 61 CG9743 FBgn0039756 FBtr0085571 1 1 1 83 3R 26022751 26022826 TACGACAAGAACCTCATGTCC 59 26022688 26022706 AACGTGGTGGTAATTGTGC 59 NA Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 3 2 2 83 3R 26021215 26021233 GAACTGCTCAAGGATGTGG 58 26021088 26021171 GTACAGCAGGACATAGAATCTC 58 NA Drosophila melanogaster 61 CG31031 FBgn0051031 FBtr0085566 2 1 1 95 3R 25888995 25889013 TTCTACAATGGCCCTGCTC 59 25889072 25889090 GTACGGATGGTACCTTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34298 FBgn0085327 FBtr0112494 2 1 1 76 3R 25825858 25825937 TCCAATGTGAGCAACATGC 59 25825977 25825995 GCCAGTTTGTTATCCACCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11899 FBgn0014427 FBtr0085390 3 1 1 104 3R 25026280 25026384 CCGAAGAGGTACTGAAAGAG 57 25026451 25026469 GGATCTTGGCATAGTTGCT 57 NA Drosophila melanogaster 61 yemalpha FBgn0005596 FBtr0085415 1 1 1 119 3R 24947496 24947514 TATGGCAACTCCTATGCCA 58 24947327 24947413 GATTTCGTCGTAGGCTTCC 58 NA Drosophila melanogaster 61 CG1951 FBgn0039623 FBtr0085342 1 1 1 101 3R 24853844 24854092 ATCTGTTCTCATTGGGCGT 59 24854157 24854175 GATCATTTGCGTAGCGACG 59 NA Drosophila melanogaster 61 Gfat2 FBgn0039580 FBtr0085297 2 1 1 136 3R 24163696 24163716 ACATTAGGACTGTCCTCAAGC 59 24163378 24163598 CTCCTTGACTTTCAGTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 2 1 2 99 3R 23484261 23484339 TGGTGAGAGCTTGGATGAC 59 23483825 23484199 CTGGACGAACTGAGAGTAGG 59 NA Drosophila melanogaster 61 CG5611 FBgn0039531 FBtr0085199 2 1 1 94 3R 23460813 23460895 CAAGAACTCTGAAATAAAGGGC 57 23460740 23460758 TTTCGATCTCGATTTCGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34293 FBgn0085322 FBtr0112489 2 1 1 83 3R 22991079 22991161 GCTGATCAATGGATTCTTTCTG 57 22991017 22991035 AGGGTTTGCATGTAGTTGG 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084994 3 1 6 105 3R 22087130 22087148 GTTAACCGCTCTCCTCCAG 59 22083749 22087064 GATTCGAGTGTAGTTCGAACTG 59 NA InUTR Drosophila melanogaster 61 CG5886 FBgn0039379 FBtr0084907 2 1 1 181 3R 21677872 21677893 CATAAAGTCCGTAAAGAACGAG 57 21678034 21678160 GCAGCTTTAACTTCTTGGTC 57 NA Drosophila melanogaster 61 CG33494 FBgn0053494 FBtr0089607 2 1 1 116 3R 21320010 21320028 CTTATGGTCGACAGCAAGC 59 21319776 21319797 GGATTGTCTGAGTTTCTTATCG 57 NA DesignNoJunction Drosophila melanogaster 61 MED28 FBgn0039337 FBtr0084836 1 1 1 60 3R 21302924 21302944 GGACAAACAAGGAGGAAATCG 59 21302964 21302984 ACGTCTATGAAGCGATTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 danr FBgn0039283 FBtr0084780 3 1 1 60 3R 20964303 20964321 TACAGTCCAGCCGATTACC 58 20964345 20964363 CCACAAGGCTAAGCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204 1 1 2 102 3R 20925093 20925111 GTTCAAAGCACCCGAATCC 59 20925177 20925676 GAATTTGAGGCACCATCGT 58 NA InUTR Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0084715 2 1 2 99 3R 20745296 20745654 GCCATAAACGAGTTCACCC 58 20745717 20745735 AGTTCTTCTCGTACAGCCG 59 NA Drosophila melanogaster 61 CG7006 FBgn0039233 FBtr0084704 3 1 1 210 3R 20676480 20676550 ACCTGTCCAAATACATTGGC 58 20676722 20676741 GCCGTGATATGGAACTTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7006 FBgn0039233 FBtr0084704 2 1 1 209 3R 20676481 20676551 CCTGTCCAAATACATTGGCA 58 20676722 20676741 GCCGTGATATGGAACTTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089915 2 1 2 175 3R 20483112 20483132 TGATATGGAATTGGACACTGC 58 20484126 20484231 ATCGGCTTTATATTGCCGG 58 NA InUTR Drosophila melanogaster 61 Wsck FBgn0046685 FBtr0084669 3 1 1 87 3R 20454380 20454451 TCAGTCTCGGATTGGTGAG 58 20454311 20454330 TCTAGGGATGTCACATGCTG 59 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324,FBtr0273323 2 2 2 81 3R 20179237 20179351 AACCATATCTGACGATGTCTG 57 20179391 20179412 CGATACAGATCGATTAAACACC 57 NA Drosophila melanogaster 61 kal-1 FBgn0039155 FBtr0084549 1 1 1 81 3R 19972391 19972409 GTGGGTTTCCGGTTAAACC 59 19972451 19972533 GTTCATAGACCTTCTCCTTGTG 58 NA Drosophila melanogaster 61 sec10 FBgn0027103 FBtr0084547 3 1 1 81 3R 19962226 19962245 AAGACGAACATCATTGTCCA 57 19962286 19962365 AGTACTTGGGTGTATTACTCAC 57 NA Drosophila melanogaster 61 Rab7 FBgn0015795 FBtr0084503 2 1 1 97 3R 19819896 19819978 CAATGCAGATCTGGGACAC 58 19820039 19820057 CACATCGTAGACAAGCACG 59 NA Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 2 2 2 93 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594240 19594258 TTGTACTTGGTGGGATCGT 58 NA Drosophila melanogaster 61 CG6688 FBgn0039038 FBtr0084343 1 1 1 92 3R 18838523 18839646 CGTTCTGGAGGTAAATGGC 58 18839702 18839720 AGAATTGTGACGCAGTCCT 59 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 3 2 2 147 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828596 18828615 GTGAACAGTTTGTCCGACAG 59 NA Drosophila melanogaster 61 Irp-1A FBgn0024958 FBtr0084327 2 1 1 80 3R 18548928 18548947 GTATTTGAAGGCCACTCGAC 59 18548804 18548886 TCCAAAGTTACAGACTCCGT 58 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 3 2 2 106 3R 18523290 18523368 TCACCAAAGCTCAATTGGC 59 18523437 18523456 CAGTCTCTGCATAACATGCT 58 NA Drosophila melanogaster 61 CG31161 FBgn0051161 FBtr0084271 1 1 1 80 3R 18443460 18443482 CGAGATATGCAGAACTACTACGA 59 18443519 18443610 CTGATTACAACGGCACTTAAGG 59 NA Drosophila melanogaster 61 CG33099 FBgn0053099 FBtr0084288 3 1 1 80 3R 18355810 18355828 AACTCCACAAGGCTTTCAC 58 18355697 18355769 AAACAGCTTTGATCTTGTCCTC 59 NA Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084290 3 1 2 131 3R 18317068 18317151 CTCGAAGTCTTAAATCGCGG 59 18316719 18316737 TTCGATATGGACAGAGCGG 59 NA InUTR Drosophila melanogaster 61 CG5382 FBgn0038950 FBtr0084237 1 1 1 124 3R 18191359 18191441 ATCCAAAGTGCATTGTGCAG 59 18191187 18191272 AACATGGTAGCAGACGAGG 59 NA Nonspecific Drosophila melanogaster 61 CG5386 FBgn0038945 FBtr0084240 2 1 1 89 3R 18167911 18167929 CAAATTGGCTCGTTCTGCT 59 18167749 18167858 TGTTGTGGTGCTTTGTCAG 58 NA Drosophila melanogaster 61 CG34377 FBgn0085406 FBtr0112610 2 1 1 82 3R 18137784 18137868 TACAGAGACTAAAGACACAGAAGG 59 18137725 18137744 CTTGTTCCGGTCATGAATGG 59 NA Drosophila melanogaster 61 CG34377 FBgn0085406 FBtr0112610 1 1 1 80 3R 18137790 18137874 AGACCATACAGAGACTAAAGACAC 59 18137733 18137752 GGTCATGAATGGCCATTTCC 59 NA Drosophila melanogaster 61 bap FBgn0004862 FBtr0084087 3 1 1 255 3R 17215146 17215164 CTTTGGACATGAGACGCTG 58 17215503 17215522 CAGATCTTCACCTGGGTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4424 FBgn0038765 FBtr0083841 3 1 1 82 3R 15853459 15853540 GAATTCAGATAAGGGCAACGG 59 15853397 15853415 GGCCAGAGTTAGAAATGCC 58 NA Drosophila melanogaster 61 CG4733 FBgn0038744 FBtr0301117 1 1 1 80 3R 15723366 15723478 TGCTGGAGATGATCAGTCTG 59 15723521 15723539 CGTAGAAGTGCTCGTAGCT 59 NA Drosophila melanogaster 61 Arc42 FBgn0038742 FBtr0083817 3 1 1 66 3R 15703604 15703622 AATCAGTACTCACCCGCTC 59 15703738 15703757 AATGAGGCAATTTGACGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11447 FBgn0038737 FBtr0083815 3 1 1 62 3R 15687506 15687524 GATCCGTACGTGGAGAAGG 59 15687548 15687568 CAGTAATTTGAAGGCACTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123,FBtr0083795 1 2 2 158 3R 15626211 15653383 TGAATTCACAATTCTCCAGCG 59 15623208 15623226 TGAAGACCCATGTTCTCGT 58 NA Drosophila melanogaster 61 CG15025 FBgn0038709 FBtr0083768 3 1 1 116 3R 15316150 15316304 AAATCTAAGCCTTCTGTATCCG 58 15316055 15316073 TACTCTGGGATTCAAGGCC 58 NA Drosophila melanogaster 61 CG3734 FBgn0038700 FBtr0083755 1 1 1 80 3R 15215340 15215421 GCCACTATTATTCCAGAGCA 57 15215464 15215482 GGAAGCTCTCATTTCAGCA 57 NA Drosophila melanogaster 61 CG5217 FBgn0038694 FBtr0083741 1 1 1 81 3R 15073559 15073577 ACAAGGACCTGGGAAAGTC 59 15073385 15073520 GAAGGATCTTGAACATCCTTATTGG 60 NA Drosophila melanogaster 61 Cyp12a5 FBgn0038680 FBtr0083730 3 1 1 87 3R 14959527 14959548 CGAGAAACTACTGAAGGTTGAC 59 14959595 14959666 GGTGCTCGAAGTAGTATCCA 59 NA Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083689,FBtr0083688 1 2 2 90 3R 14503207 14503225 AAGGTGAAACATGCAGGAG 58 14503001 14503089 CAGATGATCCTGGATTACCTG 57 NA InUTR Drosophila melanogaster 61 CG31230 FBgn0051230 FBtr0083666 2 1 1 60 3R 14497510 14497531 TGAAGATGAACAGAAATCGTGG 59 14497552 14497570 AAGGAGAATACGAGCTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31229 FBgn0051229 FBtr0083663 1 1 1 83 3R 14494468 14494486 AAGAATTTCGCGCTCATCG 59 14494602 14494620 ATTCTTCCAGTCCGTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 3 2 2 82 3R 14234395 14234413 GGAGAACCTCAATCTGGAC 57 14234153 14234352 CGTAGATGAATTGATTGAGCAC 58 NA Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 2 2 2 81 3R 14234395 14234413 GGAGAACCTCAATCTGGAC 57 14234154 14234353 GTAGATGAATTGATTGAGCACG 58 NA Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358 2 1 2 139 3R 14114262 14114280 GATTGCAACACGTATTGCC 58 14114076 14114094 ATATGGTGTCCGTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7168 FBgn0038586 FBtr0083608 2 1 1 107 3R 14051544 14051632 AGGGATACGCTGAAGTACAG 59 14051378 14051397 GAGTTAAGCGCAGAGATGAC 58 NA InUTR Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 1 1 7 167 3R 13834720 13835676 CACTCACTGGACATTTGGG 58 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 CG12347 FBgn0038558 FBtr0083519 1 1 1 60 3R 13732408 13732428 GGAATATCTTCATGACCACCT 57 13732447 13732468 CTGAATCCTGCAAAGTATTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14327 FBgn0038526 FBtr0083465 1 1 1 103 3R 13439673 13439691 AAGACCTGTGTTGTTTCGA 57 13440099 13440118 AAGGAAACAAATTCCGAGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 3 2 2 84 3R 13361550 13361568 TGGCTAAGGGTTTCCTAGC 59 13361797 13361815 TGCAGGGAGAGCTTATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18622 FBgn0038460 FBtr0083377 2 1 1 96 3R 12809814 12810308 AGAATGACTGGATCAGTGCA 59 12809737 12809755 CTTTCGACTCCGGAGAGTC 59 NA InUTR Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083348 1 1 6 104 3R 12484784 12558454 TATCGCAGGTACAAATGGTC 57 12484699 12484718 CGGGTCAGATAATGATTCGT 57 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 3 4 4 81 3R 12474342 12474429 GGTAGACATTAAACGCTATGCC 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 CG10340 FBgn0022344 FBtr0083358 3 1 1 108 3R 12439834 12439852 CATCAAAGATGGGCAGAGC 59 12439688 12439706 ATCAGTGAGCTTCTTGTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14903 FBgn0038446 FBtr0083303 2 1 1 60 3R 12399282 12399300 GGCCTACTTGAACGATCTG 58 12399108 12399258 ACTCTCATCTTTGGCCTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083312,FBtr0083313 1 2 2 162 3R 12276740 12276764 GTAGTCTTTGTAGTATGTACAACCG 59 12272770 12272788 AGCGATGCGATATGGATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sulf1 FBgn0040271 FBtr0083273 3 1 1 96 3R 12137442 12137536 TAACCTGACCATTGATCGC 57 12137364 12137385 CTTCAACTGATCTAAAGCATCG 57 NA Drosophila melanogaster 61 Rbf2 FBgn0038390 FBtr0083213 3 1 1 60 3R 11793025 11793044 CCTTCGAAAGTTCTACGGAC 58 11793064 11793085 GCAAAGACTCTTACACAGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4520 FBgn0038355 FBtr0083167 3 1 1 80 3R 11570788 11570899 TCAAGACGATACTATGTACACC 57 11570939 11570958 TACAGTATGTTCAGGTTGGC 57 NA Drosophila melanogaster 61 CG31461 FBgn0051461 FBtr0083166 3 1 1 66 3R 11546565 11546583 AAACAGAAGCCTGAAGTCC 57 11546610 11546631 GCTCGTACACGAATAATTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083055 1 1 6 95 3R 11068898 11070095 GTTGAGTGAATGTCTAAAGCTCC 59 11070150 11070168 GATGATCTCGACCTTGCCA 59 NA InUTR Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082931 3 1 2 96 3R 10152841 10152984 ACCAATTTGTTCACGGTCG 59 10153043 10153062 CATCTGCCGAACTTGATCAG 59 NA InUTR Drosophila melanogaster 61 CG34044 FBgn0054044 FBtr0100099 2 1 1 69 3R 9538976 9539043 TTGCATACCTCACTTTGATGC 59 9538927 9538945 GATGTTGCTCTTCCTGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9757 FBgn0003060 FBtr0082860 1 1 1 111 3R 9438114 9438132 TGCCGGTGATTAGTAGCAG 59 9438021 9438039 CCACAGGATCATATGTGGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG14377 FBgn0038148 FBtr0082756 1 1 1 124 3R 9223601 9223619 ATCTGTTTGACCCTGTGCA 59 9223707 9223725 GAGTAGGTGGTAACCGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8138 FBgn0038122 FBtr0082732 2 1 1 81 3R 9007301 9007319 CTTCAAGGGAACCGATCCA 59 9007360 9007438 GATAATGGTCGATATCTCCTGCT 59 NA Drosophila melanogaster 61 CG6234 FBgn0038071 FBtr0082648 3 1 1 87 3R 8476863 8476939 AAATTAAGCTTGCGGTCCA 58 8476990 8477008 TCCAAGCGATCTTCATCGA 58 NA Drosophila melanogaster 61 CG5608 FBgn0038058 FBtr0082680 1 1 1 80 3R 8289838 8289860 GTATGCTAGTGGCATATTTACGG 59 8289728 8289798 GCGCACTCTTTAATGCTCC 59 NA Drosophila melanogaster 61 GstD8 FBgn0010044 FBtr0082575 3 1 1 60 3R 8206266 8206287 ACTTCGATATAGCCCAGTATCC 59 8206307 8206326 GTCACTTCCTTGGCATTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 1 3 3 81 3R 7936166 7936184 CTGGTTGGTATACGCAGCT 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 CG31358 FBgn0051358 FBtr0082554 1 1 1 80 3R 7857084 7857159 TGGGTCGTATTAGGAGTTGC 59 7857023 7857044 GAATGTCCACCGTATTAAACGA 58 NA Nonspecific Drosophila melanogaster 61 CG3532 FBgn0037979 FBtr0113224 2 1 1 110 3R 7839880 7839898 ATGAACGACATGCTCAAGG 58 7839969 7840053 CGTAAGGAACTTTAAGAAGACG 57 NA Drosophila melanogaster 61 Tk FBgn0037976 FBtr0082488 2 1 1 90 3R 7821153 7821171 CCGGTCAATTCCTTTGTGG 59 7820878 7821102 TCAAGTCATAGGAATCGGAGAG 59 NA Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 2 1 1 102 3R 7718483 7718554 TTTGACGAGATCATTCGCC 58 7718399 7718418 TTTCATAGGCCTCCATTGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18764 FBgn0042205 FBtr0082417 2 1 1 101 3R 7453682 7453701 CCAACGAATCATTCACCAGG 59 7453765 7453856 GTGTGAGTCCTTTCGTGGA 59 NA Drosophila melanogaster 61 Ugt86Di FBgn0040251 FBtr0082378 1 1 1 80 3R 6978743 6978965 CACAGATATGGTTGGTTCCC 58 6978682 6978700 TACAGCGACATGTGATCGT 59 NA Drosophila melanogaster 61 Ugt86Dd FBgn0040256 FBtr0113321 2 1 1 96 3R 6953856 6953876 AGGTGACCGTTATTAATGCCT 59 6953719 6953798 CTCATCATCTCGTCTGCGA 59 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 2 2 2 80 3R 6565218 6566919 GACCAAGCACTATTACAATGGA 58 6565159 6565178 GCCATAGAAGTGGGATATCG 57 NA Drosophila melanogaster 61 Cyp12e1 FBgn0037817 FBtr0301283 3 1 1 103 3R 6261646 6261664 TTTGGAAACTAGCCTGCTG 58 6261730 6261807 TTACAAGAGTAGGATCCGCT 58 NA Drosophila melanogaster 61 CG33630 FBgn0053630 FBtr0091607 3 1 1 100 3R 5888440 5888526 GTCCAAAGAAAGCAGTAGTAGC 59 5888586 5888605 GAAGTGGGATCGATCTTCGT 59 NA Drosophila melanogaster 61 Gr85a FBgn0045473 FBtr0082216 3 1 1 86 3R 5821534 5821554 ACAACAGGATCATTAGTGGAG 57 5821416 5821487 CCATTCGATACTTCGTTCCA 57 NA Drosophila melanogaster 61 by FBgn0000244 FBtr0302382,FBtr0082119,FBtr0301093 3 3 3 60 3R 5358348 5358369 ATAGTTCTAGCAATAATGGCGG 58 5358309 5358327 CTCGTTAGACGTGTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 by FBgn0000244 FBtr0302382,FBtr0082119,FBtr0301093 1 3 3 60 3R 5358058 5358076 CAGAGGCAATACTACCCGA 58 5358016 5358037 TTCCATTGCTATCGTTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 by FBgn0000244 FBtr0082119 2 1 3 283 3R 5356697 5356715 CGAGTCTGACAAGAAGACC 57 5354651 5354670 ATAATTCCGCATGATTCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42511 FBgn0260237 FBtr0300646 1 1 1 87 3R 5232775 5232853 ATTCCCAACCGCATTATGG 58 5232903 5232922 AGATATTGAAGCCGTTCGAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 2 2 2 80 3R 5081310 5081395 GATATCTAGAGCTTCGTTACGG 58 5081434 5081454 CATTAAGACCCACGGATAGTG 58 NA Drosophila melanogaster 61 CG16735 FBgn0037666 FBtr0081975 3 1 1 87 3R 5079758 5079776 AGGCACACTTATTCATCCG 57 5079824 5079893 CACCCTTATCTCTTGAGATGTG 58 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 1 2 2 80 3R 5071307 5071386 CAGTTCCAATATGGGCAGC 59 5071245 5071265 AACACCTTGACCACTATTTGC 59 NA Drosophila melanogaster 61 CG18005 FBgn0037660 FBtr0081995 3 1 1 126 3R 4889160 4889178 ACGGAGAAGAACGAGAAGG 59 4888987 4889007 ATTTGTAATCGGGTTCATCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 2 1 1 227 3R 4169504 4169577 AACTGTTTCTCTTTGCGCC 59 4169768 4169786 GTTATCCATACTGCCGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Or85a FBgn0037576 FBtr0081836 2 1 1 81 3R 4148575 4148593 TCACAATGTTCAGCAGTCG 58 4148635 4148710 CTTGGCCATCTTTATATTGGTG 57 NA Drosophila melanogaster 61 CD98hc FBgn0037533 FBtr0081824 1 1 1 80 3R 3800904 3800922 CTGCATCCTACATGCATGG 58 3800571 3800861 GGTTTCCAGACTTGATCCTG 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741,FBtr0081743 1 4 4 80 3R 3588275 3588364 AAGTAGGTCACCTAACTACCG 58 3588404 3588424 GGTTGCAAATGTCATCTATGC 58 NA Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 1 2 2 80 3R 2897684 2897703 CCATACTGCAGCATATTCGC 59 2897569 2897641 CTTGCAGGACCAAATCGTG 59 NA Drosophila melanogaster 61 Ccp84Ae FBgn0004779 FBtr0081694 2 1 1 136 3R 2517286 2517423 GGCAGCAAAGATTGTTATCG 57 2517169 2517187 GATCAACCTCCTCCAACTC 57 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081673,FBtr0081672 3 3 3 93 3R 2319013 2319031 TTAACCAGATCCCTGGACG 58 2319088 2319278 ACTCGTCCATATTTGCAGC 58 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081673,FBtr0081672 2 3 3 92 3R 2319013 2319031 TTAACCAGATCCCTGGACG 58 2319087 2319277 CTCGTCCATATTTGCAGCA 58 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 1 1 1 90 3R 2045633 2045942 AGATGATGTACCAGTTCCCG 59 2045562 2045580 ATTTCCGGCGATATTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1076 FBgn0037402 FBtr0078585 1 1 1 80 3R 1948563 1948661 GGTCGTGGAAAGAGTTATCG 58 1948703 1948722 ACTCTTCGATCTGCTTAGGG 59 NA Drosophila melanogaster 61 CG1075 FBgn0037397 FBtr0078583 3 1 1 61 3R 1854280 1854298 CTACTTTAAGCTGGCTCGA 57 1854425 1854445 GTTTCGCAATACTAGTCATGG 57 NA DesignNoJunction Drosophila melanogaster 61 Madm FBgn0027497 FBtr0078722 2 1 1 98 3R 1569807 1569825 TGATCTGCTCTTTCACCCA 58 1570739 1570757 GAGAACATAGTGCGGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 RpII18 FBgn0003275 FBtr0078787 2 1 1 177 3R 1197609 1197627 ATGGATGATGCGGACTACG 59 1197829 1197848 TGTACTTTGTGGTAATGCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 3 2 2 134 3R 1183002 1183093 TAGAAGCTTCCGAACTGATCC 59 1182888 1182907 TTTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0078785 2 1 2 157 3R 1181843 1182158 ACGAAGATGATGAACCAACG 58 1182278 1182296 TAGCATGGTATGCCTGTCG 59 NA Drosophila melanogaster 61 snRNA:U11 FBgn0083987 FBtr0111039 1 1 1 60 3L 3893144 3893162 CTTTGCATATCCAGTGCGT 58 3893102 3893120 AGCAATCCACAATGTGCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip63F-2 FBgn0004911 FBtr0073162 1 1 1 60 3L 3934772 3934792 TTTCCATCAAGATCGCTTCAG 59 3934814 3934832 CAGTCCAATTCCGGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11370 FBgn0037181 FBtr0078522 3 1 1 111 3L 22705671 22705689 ATATGCAGTATGTCCAGCC 57 22705764 22705847 TGATTGCAATCCTTCAGGT 57 NA Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089579 3 1 2 113 3L 21827827 21827845 CAATGAGAAGACCGCTCAG 58 21827919 21828181 AAGTCATTCTTCTGTTGCTCTC 58 NA Drosophila melanogaster 61 CG7202 FBgn0037086 FBtr0078393 2 1 1 99 3L 21485278 21485686 TTATACACAGAGCGTCCTGG 59 21485198 21485216 CAAACTGGTAGGTGCTGTC 58 NA Drosophila melanogaster 61 sa FBgn0002842 FBtr0078401 2 1 1 80 3L 21399728 21399747 CATCCAAGAACTGTGAGGTG 58 21399604 21399686 CAATCTCACGGAATTTGCCA 59 NA Drosophila melanogaster 61 CG7632 FBgn0037071 FBtr0078339 2 1 1 94 3L 21298056 21298077 GTTGCCAAATGTAAGAAACTCC 58 21298191 21298209 CCCATGGAACTGGTATGCT 59 NA DesignNoJunction Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 2 3 3 98 3L 21265895 21265916 AGGTAACTCAGTTCTACACAGC 59 21265763 21265836 AAACTTTGAGTCCGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456,FBtr0112455 1 2 2 101 3L 21190184 21190205 CAGTTGTTGAATTTGCAGAGAC 58 21190265 21190285 GCTGGATTTCTTGGTGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42337 FBgn0259239 FBtr0299857 1 1 1 80 3L 21179488 21181895 ATATTACCGATGACATAAGCGC 58 21179429 21179447 CAACTTGCGATGAAGTGGG 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 3 5 5 147 3L 20381809 20381827 CAAGCTGGTCTACTTCGAG 57 20381938 20383024 ATTGTCCATCTGTAGGTGC 57 NA Drosophila melanogaster 61 CG5498 FBgn0027565 FBtr0078238 1 1 1 85 3L 20376029 20376117 GAATCATGAACGTCGCAGTC 59 20375963 20375981 GAACAACGCCACTGTTCTG 59 NA Drosophila melanogaster 61 CG6996 FBgn0036950 FBtr0302721 3 1 1 117 3L 20200720 20200977 TCGAGATGGACACAAAGCT 59 20201058 20201076 ATCTTGGTTCCGTTGACCA 59 NA InUTR Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 3 3 3 97 3L 19992458 19992476 AACATAGCTCCGAAAGGAC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 2 2 2 143 3L 19811639 19811657 AACAGGTTGACTCCTCCAC 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 1 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 825-Oak FBgn0052208 FBtr0273406 3 1 1 88 3L 19465196 19465273 TCAAATACGCTGTCGTCGT 59 19465126 19465144 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 CG3808 FBgn0036838 FBtr0075041 3 1 1 74 3L 18993415 18993434 GTTGAAGTGAAGAACATGGG 57 18993304 18993325 GTCAAATTTGAGGGTGTTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Or74a FBgn0036709 FBtr0075247 3 1 1 80 3L 17321265 17321394 GGCATTTACGAATCCCTGG 58 17321203 17321223 ATTCCTAGTGCCAGTAACTCC 59 NA Drosophila melanogaster 61 CG13023 FBgn0036677 FBtr0075307 2 1 1 105 3L 16917958 16918032 ATTGAAGCAACAATCCGCC 59 16917871 16917889 AATCTTGGTCTGTGGCTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0075350,FBtr0100145 2 2 2 64 3L 16674040 16674348 AATTTACACAGGTGGCCGA 59 16673994 16674014 CGATATGTGCTTCGTGTTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 1 2 2 80 3L 16558053 16558143 CTTACTACCAGTTCCGCCA 59 16557991 16558009 GGGATCCAAACAGACCCTC 59 NA Drosophila melanogaster 61 CG13058 FBgn0036610 FBtr0075372 2 1 1 208 3L 16321973 16322079 CATCACGGTTGTTTGCCTC 59 16322248 16322269 CCTGGTGATGATTAACAATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 DNApol-delta FBgn0012066 FBtr0075522 2 1 1 101 3L 15980702 15980774 CAAGAAGCCCAGGAATCCT 59 15980619 15980637 CCCATTAGCAGAGTCTGGT 58 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0100035,FBtr0301510,FBtr0100036 2 5 5 80 3L 15860408 15860428 CATCATACCAATGCATTTCGC 58 15858923 15860368 GATAAGATCAGGTGACGTCTC 57 NA Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075534,FBtr0075535 2 2 2 117 3L 15834216 15836651 ATCTAAAGTGCCAATTAGCCAG 58 15834120 15834138 CAATAGCGATGGACAGCTG 58 NA InUTR Drosophila melanogaster 61 Eig71Eh FBgn0014848 FBtr0075583 3 1 1 131 3L 15652398 15652420 GCATCCAAAGACTTAATGATCCC 59 15652220 15652308 GATTCGGAGAAGCTATCGCT 59 NA Drosophila melanogaster 61 Eig71Ed FBgn0004591 FBtr0075572 2 1 1 80 3L 15645932 15645952 ACTAAGACTCGGAACAATTGG 58 15645994 15646088 TCGATTAGAACCCAAGCAG 57 NA Drosophila melanogaster 61 CG6498 FBgn0036511 FBtr0075562 2 1 1 131 3L 15563027 15563118 ATTTATCGTCTCAGTGCTCG 57 15563212 15563230 AATGCTGTTTGAGGTGCTC 58 NA Drosophila melanogaster 61 CG6876 FBgn0036487 FBtr0075642 3 1 1 71 3L 15153497 15153515 GAAGGAACGATATGCGCTG 59 15153550 15153627 TCCTCTTCGATGTCTCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 2 2 2 90 3L 15128051 15128069 ATCATCTGCGAATGAGCAG 58 15127562 15127997 GAACTGAGAACCACTTCGT 57 NA Drosophila melanogaster 61 CG13463 FBgn0036470 FBtr0075631 1 1 1 60 3L 15048279 15048298 GAGATTTCCCAGAGTGACGA 59 15048321 15048339 CAGTTTGATCCTCCTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9384 FBgn0036446 FBtr0075690 2 1 1 165 3L 14755484 14756158 TCTGCAAACAAGTACCCAC 58 14756865 14756885 CATCCTCATTCCTCCTATGAC 57 NA InUTR Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075723 3 1 2 192 3L 14540570 14543645 CAATTAACGCTACAATGACGAG 58 14540399 14540417 CATTCGCTCCAGGTAACTC 58 NA InUTR Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749 1 1 2 80 3L 14090899 14090977 AGGGTATTGACCGCATGTC 59 14090837 14090857 GAGGCTGACGAATATTCTGGA 59 NA Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 3 2 2 61 3L 14045127 14045145 TCTCTAATACCCACACGCC 58 14045170 14045188 GATCTCCTGACCCAGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 26-29-p FBgn0250848 FBtr0075766 2 1 1 95 3L 13988869 13988968 CTCCGGTGAAAGATCAATCTG 58 13989025 13989043 GATTGCCGCCATTCTTCAG 59 NA Drosophila melanogaster 61 ssp2 FBgn0036389 FBtr0075759 3 1 1 111 3L 13964105 13964123 CTGCCAAGACCTAGTTTGG 58 13964198 13964277 ATACAGCGGAGTCATCCTC 58 NA Drosophila melanogaster 61 CG17154 FBgn0036246 FBtr0075990 2 1 1 60 3L 12082067 12082085 CAAGTTCGTCAAGGTCCAC 58 12082107 12082127 GTAATCCTGACTAAGATCCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 3 2 2 89 3L 12064089 12064172 GTGGCAAGGTGATATACTCCA 59 12064020 12064038 ACGATGTCCAATTGTCCCT 59 NA Drosophila melanogaster 61 CG32079 FBgn0052079 FBtr0300188 1 1 1 80 3L 11019708 11019774 GTTGGAGTGATCCTTTCCC 57 11019815 11019836 ACCTTGATTTAGAACTCCACAG 58 NA Drosophila melanogaster 61 CG14153 FBgn0036094 FBtr0076259 2 1 1 60 3L 10636690 10636774 GCTATGTGCACTTATGCCC 59 10636797 10636816 TGATGCATACTGAGCTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14151 FBgn0036089 FBtr0076280 2 1 1 103 3L 10621376 10621454 GTATTTGCCAGGCATGGTC 59 10621291 10621310 TTTCGCCTATAGATACCCGC 59 NA Drosophila melanogaster 61 Cdk8 FBgn0015618 FBtr0076369 2 1 1 116 3L 9831658 9831678 CAGATAGAGCGTACGAAAGTG 58 9831500 9831580 TTCTTTGCCATCGCTTGTC 59 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 1 2 2 81 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677485 9677505 AAGAGATACGAGACACTCTCG 58 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435,FBtr0110843 1 3 3 80 3L 9625378 9625398 AGAAGTGGGATGAAATTTCCG 58 9625256 9625339 ATACTATAAAGGCTTCTGTGCG 58 NA Drosophila melanogaster 61 Hsp22 FBgn0001223 FBtr0100558 1 1 2 80 3L 9366407 9366494 TCAGGGATACAGCAATGTGG 59 9366535 9366555 GACGTTTATCGTCAAAGTCCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5644 FBgn0035948 FBtr0076556 2 1 1 91 3L 8971374 8971461 CTAGTGATGAAGAAACTTGCAC 57 8971304 8971322 AGATGATCAGCATGGAAGG 57 NA Drosophila melanogaster 61 CG13313 FBgn0035941 FBtr0076512 3 1 1 87 3L 8952220 8952238 GGCGAATGATACCCTCCTC 59 8952286 8952914 TGTATAGAAAGGAAACCAGCGA 59 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 2 3 4 111 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942279 8942297 CAGTTCCTGACGATGTAGG 57 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 3 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727350 TGGACAAGTTCTTGACTTCGA 59 NA Drosophila melanogaster 61 Cp18 FBgn0000357 FBtr0076571 2 1 1 159 3L 8719942 8720134 AGTTCATGTGCATCTGCCT 59 8720257 8720275 TATCCACCACCGTATGAGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 2 1 1 148 3L 8409880 8409954 AAATGCTCAATTGCGGTCC 59 8409750 8409768 GTCATTTCGCTTCGAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32368 FBgn0052368 FBtr0076749 2 1 1 62 3L 7908627 7908646 AATCCGACAAGGAGAAGAGG 59 7908671 7908689 TCCTCATTTCGTGCTCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Srp19 FBgn0015298 FBtr0076879 2 1 1 116 3L 7340875 7340966 ATATGGAGCGATGGATTTGC 58 7340778 7340802 GAATCTCAATATAGCTGGGATTGTC 59 NA Drosophila melanogaster 61 CG14829 FBgn0035751 FBtr0273403 1 1 1 85 3L 7230609 7230693 CGTTCTACTCACACCTGGT 59 7230542 7230560 CTAGGCAATCGATTCCAGC 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 1 2 2 86 3L 7117435 7117511 GTTATGTCCACTGTCTGCA 57 7117367 7117385 ATACAGCAAGTGGTCATCC 57 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906 2 2 4 132 3L 7060053 7060658 ACAACTATGCAACGCATGC 59 7060751 7060772 CAGATTGCCGGAATATTATCCG 59 NA InUTR Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 2 3 3 80 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609816 6609835 CGCTTTGAAGATGTCCAGTG 59 NA Drosophila melanogaster 61 CG10144 FBgn0035704 FBtr0076986 2 1 1 81 3L 6488243 6488261 ATCTCTGCTGGAATCGGAG 59 6488113 6488201 ATCATCAAGATCTTCGAAGTCC 58 NA Drosophila melanogaster 61 D19A FBgn0022935 FBtr0077016 2 1 1 211 3L 6181317 6181335 TCAGATGACTCCGAAGACG 58 6181063 6181144 GTAGTGAAACCTTTCTTGCAG 57 NA DesignRelaxed Drosophila melanogaster 61 Cpr65Ay FBgn0085300 FBtr0112466 3 1 1 175 3L 6151585 6151663 TGAAATTGCTAAGCCAAGTG 57 6151373 6151391 GGGATCCTGAACTGTTTCC 57 NA Drosophila melanogaster 61 Lcp65Ag1 FBgn0020638 FBtr0077058 3 1 1 80 3L 6128128 6128208 AGCTTCAAATACGACTGGGA 59 6128067 6128086 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 CG13708 FBgn0035577 FBtr0073358 3 1 1 126 3L 4832350 4832368 AGCACAACCTGATCAACAC 58 4832165 4832261 CCGTTGCTATATTCACCCAG 58 NA Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 1 2 2 93 3L 4402148 4402235 GCATGAAACCTATTTGCTCC 57 4402291 4402309 AAACGTCCTGTGAAACCAG 58 NA Drosophila melanogaster 61 CG32251 FBgn0052251 FBtr0073286 3 1 1 80 3L 4318128 4318149 CACTATTTCTGTGAAGTCAGCG 59 4318186 4318270 CTCTTTCGATTCTCATGTTCCTC 59 NA Drosophila melanogaster 61 Rop FBgn0004574 FBtr0073263 3 1 1 60 3L 4137088 4137106 ATTGGGAGGTCCTTGTTGG 59 4137046 4137066 AAATCGCTGAGGAAGATTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RfC4 FBgn0260985 FBtr0073264 3 1 1 132 3L 4135756 4135828 TATTATTGCTGGTCCTCCTGG 59 4135644 4135662 GACCACATCGATTCCTCGT 59 NA Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 2 1 1 83 3L 4115626 4122156 AATTAACTCCAAGTACAGCGAG 58 4115564 4115582 GATGTGTTGATGGGCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG16985 FBgn0035355 FBtr0072929 3 1 1 162 3L 2599822 2599906 TATGTCGAAAGGATCCCATCC 59 2600030 2600048 CTTTCCATCGGACTTACGC 58 NA Drosophila melanogaster 61 CG8993 FBgn0035334 FBtr0072889 2 1 1 70 3L 2372443 2372461 GATTGTGGACTTCTTCGCA 58 2372557 2372575 CCACAATACTCTCGATGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15879 FBgn0035309 FBtr0072916 3 1 1 159 3L 2168774 2168963 CTAAGCGATTTCAAGGAGGT 57 2168634 2168652 CTATGTAGTCGGGAAGCAG 57 NA Drosophila melanogaster 61 Cht2 FBgn0022702 FBtr0072795 2 1 1 97 3L 1753507 1753526 TCATGTGCTACGACTACCAC 59 1753302 1753448 GGAGAATTTCACACTCAGCG 59 NA Drosophila melanogaster 61 CG7967 FBgn0035251 FBtr0072809 3 1 1 90 3L 1652749 1652770 GAAGTCCATCCAACACTTTCTG 59 1652619 1652699 CTGGAGAGCATAGAGTCTCG 59 NA Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 2 2 2 68 3L 1603343 1603361 CAAATAGACTCGCAACCGC 59 1603393 1603469 TGTGGTTCCTATCGAGGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9173 FBgn0035218 FBtr0072720 3 1 1 60 3L 1422542 1422563 ACCATGAGGTTAATCTACCCAG 59 1422503 1422521 CATTCGCAGATGAGGAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32320 FBgn0052320 FBtr0300067 1 1 1 80 3L 1401140 1401161 CAGGAGAGCAACAATAAATGTG 58 1401202 1401280 ATTTCCCGAAGAGTTCCCA 58 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 3 2 2 81 3L 1285038 1285058 ATCTTCCAGATACTCTACCGC 58 1285100 1287940 GACTGTCAACTAGCAGATGG 58 NA Drosophila melanogaster 61 CG13889 FBgn0035168 FBtr0072586 1 1 1 80 3L 847603 847622 TTATCCCTGAAACAGACGCA 59 847663 847740 TGAATGCTGGAGGAATTTGTG 59 NA Drosophila melanogaster 61 CG7028 FBgn0027587 FBtr0072528 1 1 1 85 3L 209076 209158 CGGAACAACGAAATAATGCAC 58 209011 209029 AAACGATCCTCTGGATCGG 59 NA Drosophila melanogaster 61 CG13876 FBgn0035109 FBtr0072484 1 1 1 83 3L 206256 206274 CTGTTCTGCTACAGTTGGC 59 206378 206396 TAGTGATCAGACGAAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-2949 FBgn0082981 FBtr0113494 2 1 1 63 2R 4982894 4982913 TGCAAATCGAGTTCTACTGG 58 4982936 4982957 GCGCATCACAAATTAATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30201 FBgn0050201 FBtr0071983 1 1 1 62 2R 18959592 18959611 GAGTGGTTAAGGAGATGGAC 57 18959549 18959567 GACAGGACTTGAACCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0072408 1 1 3 174 2R 20849261 20852103 GACAAGTCGAAACTGCCTG 59 20849003 20849021 GATGATGTCAGTGCTGTCG 58 NA Drosophila melanogaster 61 Lcp9 FBgn0025578 FBtr0072430 3 1 1 89 2R 20667813 20667888 AGTTTGTGATCGTTCTTGCC 59 20667743 20667761 GCAAGTTAACCTCGGAGTC 58 NA Drosophila melanogaster 61 CG3608 FBgn0035039 FBtr0072320 3 1 1 81 2R 20500738 20500757 CAATCTCTGGCTGAGTATCC 57 20500801 20500882 CAGATCGCCCTTAATTCCC 58 NA Drosophila melanogaster 61 uri FBgn0035025 FBtr0072308 3 1 1 80 2R 20454948 20455019 GATCCCAGAAGTCAGTTCTC 57 20455060 20455080 ATTACTGGTCGGAGTTATGGA 58 NA Drosophila melanogaster 61 CG11414 FBgn0035024 FBtr0072307 2 1 1 81 2R 20450420 20450438 AGGTGGAGATCACTTTGGG 59 20450482 20450558 TCGTCATTCCTGGTTCTCAC 59 NA Drosophila melanogaster 61 CG4563 FBgn0035006 FBtr0072355 2 1 1 83 2R 20340302 20340387 GTGATTCAGATCACCGACG 58 20340237 20340255 AAAGAATAGGGCAATCCGG 57 NA Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072367 3 1 2 98 2R 20269369 20270772 TGATTTAGGATGCACCTCGA 58 20269290 20269308 ACATCCGACAGGAGAATGC 59 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276,FBtr0300874 1 3 3 96 2R 20090087 20090265 CAATAGCGGCAAATTCCAG 57 20090009 20090027 ATTGGCCAACTGATACGAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697,FBtr0299696 1 2 2 133 2R 19962578 19962725 CAGAGTACCTCCGAGACAC 58 19962822 19962840 TGGAATTTGTAGCCTCCGG 59 NA InUTR Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 2 2 2 94 2R 19792043 19792062 TATGTTTGGCTTCAGCTTCG 59 19792119 19792194 TATCGCACGTGTCTATGCT 59 NA Drosophila melanogaster 61 CG4882 FBgn0025336 FBtr0072225 2 1 1 151 2R 19769761 19769779 CGGAATTCAACAAGGTGGC 59 19769574 19769648 CTTCTGTTTCCTGAGCTTGAG 59 NA Drosophila melanogaster 61 CG34105 FBgn0083941 FBtr0110784 1 1 1 60 2R 19637178 19637196 GTCCAGCAATAGCACTACG 58 19637136 19637154 CGAAGTGGAAGAAGAGCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr59d FBgn0041236 FBtr0071976 1 1 1 60 2R 18991680 18991699 GGTCTGGATCATCGATTGGA 59 18991583 18991601 GATTCCGCACCAAGTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13538 FBgn0034820 FBtr0071966 1 1 1 60 2R 18975033 18975051 ATTGCGAGATTAAAGGCGG 58 18975075 18975093 CACTTGCGGTAGCTATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42640 FBgn0261363 FBtr0302290 2 1 1 129 2R 18954179 18954197 AGCTGCAGAACTTCTTGTG 58 18954289 18954370 GTCTGGTCAACCTTATCCTC 57 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 1 8 8 176 2R 18612190 18612208 AAGTCATACGATGCCAGCA 59 18611659 18612050 AAATCTTGCACTGCCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34446 FBgn0085475 FBtr0112750 3 1 1 104 2R 18535186 18535204 CTTATTGCAGGACCAAGGC 58 18535100 18535118 GGTATACGCCCAGGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0071797,FBtr0300693 1 2 2 120 2R 17979697 17979715 AGGTGGAGTACACCAAGAG 58 17979513 17979531 AATCCTCCCGTGTACTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Gr58b FBgn0041238 FBtr0071732 2 1 1 107 2R 17866102 17866178 AAGATGCAAAGGGAGTTGGA 59 17866014 17866032 ATAACTAAGGCAAGCGGGT 59 NA Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 1 2 2 80 2R 17709905 17709989 TGCAATCGTGAGATCTTCC 57 17709843 17709861 ATCCGATTCACAACTGGAG 57 NA Drosophila melanogaster 61 CG10496 FBgn0034631 FBtr0071701 2 1 1 165 2R 17389046 17389141 TCGAAGAAATCCACATGCC 58 17388899 17388917 ATGCTGCGCAGATTATCTG 58 NA InUTR Drosophila melanogaster 61 CG9394 FBgn0034588 FBtr0071567 1 1 1 60 2R 17006858 17006877 CTCATGTTCCATGTGAACCT 57 17006897 17006918 CATAAACTTCCACCAGATAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9235 FBgn0034560 FBtr0071517 1 1 1 60 2R 16797304 16797323 GCTCGCTAGAAGACATATCC 57 16797345 16797364 GCCAGGATGAATTTGAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr FBgn0040726 FBtr0086238 2 1 1 94 2R 16633396 16633515 ATTCTGGTACAAAGGCAGC 58 16633573 16633591 CAGTCCAATCATCCTCGAC 57 NA Drosophila melanogaster 61 CG30152 FBgn0034543 FBtr0086236 3 1 1 80 2R 16559171 16559259 GAAACCATCTACGATCTGTTGC 59 16559299 16559318 CTCGTAGACAACGTTGAGGT 59 NA Drosophila melanogaster 61 CG16741 FBgn0042198 FBtr0086289 3 1 1 60 2R 16234779 16234799 GGAGAAGATTAACGATCAGGT 57 16234820 16234839 AGTTAAATCGTCGTCCTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8517 FBgn0034472 FBtr0086329 2 1 1 92 2R 15601833 15601851 TTGTGGACTTTCATGCCAG 58 15601968 15601986 ATCTCACTCGACCTTCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9975 FBgn0034435 FBtr0086518 2 1 1 80 2R 15231206 15231295 GTGTTCTATGACGATTCGCG 59 15231337 15231356 GCAATTGTAGGTGGAGTTGG 59 NA Drosophila melanogaster 61 CG15082 FBgn0034397 FBtr0086617 3 1 1 89 2R 14718797 14719687 TATTTGCAGGTCCACTACGA 58 14719739 14719757 GAATTTGACGGTCACGAGC 59 NA Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 1 2 2 84 2R 14058152 14058230 GAAATAAGGGTTGCCGTCG 59 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 HLH54F FBgn0022740 FBtr0089547 1 1 1 178 2R 13645147 13645601 GTTCTCAAAGCTCCCAACC 58 13645743 13645761 CTGCTTGATGTAGAGCGTG 58 NA Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 3 1 1 148 2R 13405584 13405606 CTCAATGGATGAGGATATAACCG 58 13405399 13405476 AACGCTCTACACCAAATCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 1 1 2 111 2R 13345283 13345301 GATTGGAGAGCCCAATCAG 58 13345376 13349515 TGTCGACGTCGATTTACCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10764 FBgn0034221 FBtr0086919 2 1 1 80 2R 13341116 13341137 GGTGGCACAATTATACATATGC 58 13341436 13341546 CAACCTCACGTATAGATCATATCC 58 NA Drosophila melanogaster 61 Lhr FBgn0034217 FBtr0086917 1 1 1 60 2R 13319241 13319259 AAAGCTACTCGAAAGCTGG 57 13319283 13319301 ATTCGTCGTATTCGCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bap55 FBgn0025716 FBtr0086960 2 1 1 90 2R 13318057 13318154 GCCAAATAATGCTGACCAG 57 13317985 13318005 TTTCATATAGGTCTGCACCTC 57 NA Drosophila melanogaster 61 CG30101 FBgn0050101 FBtr0086963 2 1 1 81 2R 13296484 13296644 AGGTTGAGGTGGAGAAACC 59 13296421 13296441 TAAGGAACCTTCTTCTCGACG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298 2 1 7 80 2R 13249536 13249554 ATTCCAGTTTATCAGCCCG 57 13249596 13250267 GAGAAGACTATCGCATGAGAC 58 NA Drosophila melanogaster 61 CG15605 FBgn0034196 FBtr0087002 2 1 1 60 2R 13014419 13014439 GAGTTGTAAAGAGGGACAAGG 58 13014379 13014398 CTAAAGTATCGAGCCGTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100250,FBtr0100252 2 2 4 88 2R 12884559 12884577 CCGTGTTACCATGACTCGA 59 12884222 12884507 GTGTTGTAGCATTGCCGAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG9010 FBgn0034173 FBtr0087067 2 1 1 60 2R 12846656 12846675 TCAGTTGGTACGATAACGAG 57 12846615 12846635 GCATAGAGAACTAGGTCAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fen1 FBgn0025832 FBtr0087075 2 1 1 76 2R 12742771 12742789 CGCGAAAGTGAGATGAAGC 59 12742651 12742669 ATGAGGAACTGGTACAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087024 2 1 2 236 2R 12669535 12669681 GGAAGGAAGCAAATTGTGGA 58 12669879 12669898 GGAATATCCACTAGGTCCCA 58 NA DesignRelaxed Drosophila melanogaster 61 Acp53C14b FBgn0034153 FBtr0087081 2 1 1 79 2R 12636895 12636916 TCAAGTCCATATTTCTGCTCAG 58 12636781 12636800 TTCACTTATAGTGGCCTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34458 FBgn0085487 FBtr0112764 3 1 1 61 2R 12559651 12559669 TTATTGGTGGCCAGTTTGC 59 12559694 12559712 ATTTAGCTGGAGGGACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15705 FBgn0034104 FBtr0087137 1 1 1 104 2R 12168711 12168731 AAAGTGTCACATTCAAGACGG 59 12168797 12169030 TCTTCAGCTGCTCATCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-cys FBgn0027091 FBtr0087234 3 1 1 80 2R 12030851 12030869 CGGCAATAATGTAACGTGG 57 12030910 12030998 GAAATGTAAGATCTAGCATGCC 57 NA Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297 3 1 2 127 2R 11822077 11822312 GAATAGCAAGAAGCGCCAC 59 11821968 11821986 AAAGAAACCATTGGCGACC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112832,FBtr0112831,FBtr0087302,FBtr0087303 2 5 5 80 2R 11772896 11772917 CTGGACAATAACCAAATCACCT 58 11772063 11772857 GTTGTTCAGCGTGAGTATCTC 59 NA Drosophila melanogaster 61 Ranbp11 FBgn0053139 FBtr0087278 1 1 1 63 2R 11572391 11572409 CCTCTACAGCGTGATCGAG 59 11573738 11573756 TTCGATGAGGTAGACGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777,FBtr0113082,FBtr0087337,FBtr0113083 1 4 5 139 2R 11443519 11449340 GATCGTAATGTATTCAACGCAC 58 11449440 11449458 TCGTAGCTGGGTAAATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 Ir52d FBgn0050464 FBtr0273344 3 1 1 60 2R 11394511 11394530 ACAACAACTTCCATCAGGTC 58 11394550 11394571 TAGTTCCTTTCCTGAAATAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30472 FBgn0050472 FBtr0087360 2 1 1 92 2R 11310940 11311016 TCCATCATTGACTCTGGAGG 58 11310867 11310890 GTGTATGAGTTACACTCATCTTGC 59 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 2 3 3 80 2R 11204639 11204718 CAAAGTGGGATAGGCTCAC 57 11204762 11204780 CGTATTCCTGAGTTTGCCA 57 NA Drosophila melanogaster 61 Ir51b FBgn0050081 FBtr0087365 2 1 1 60 2R 11095547 11095566 CAAACGCTGCTTACAATGTG 58 11095589 11095607 TCCCGTGTAGAGATGAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 2 4 4 110 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026097 11026115 CTGGATTACATTGGCCTGG 58 NA Drosophila melanogaster 61 U3-55K FBgn0053505 FBtr0091445 1 1 1 80 2R 10747000 10747020 CAAAGATAGCATTGAGTGCGT 59 10746883 10746960 CATAAACCGATTGCTCCATCC 59 NA Drosophila melanogaster 61 CG33469 FBgn0053469 FBtr0087504 1 1 1 60 2R 10493520 10493541 GGTGGTACATTTATTATGGCCT 58 10493481 10493501 TTTCGAATCCTTTCCAGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10104 FBgn0033933 FBtr0087486 1 1 1 60 2R 10279201 10279225 CCAGGCTATACTTATCAATGAATCC 59 10279240 10279261 TAGAAACTGTCCAAAGGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34444 FBgn0085473 FBtr0112748 3 1 1 92 2R 10257481 10257559 ATCGGTTCGAATTGCATGG 59 10257613 10257633 CATTGAGATCTCCCAATTGGT 58 NA Drosophila melanogaster 61 CG8613 FBgn0033924 FBtr0087546 1 1 1 80 2R 10242239 10242320 CAAGGAAGACCACGATGGA 59 10242362 10242382 TCATAATAGTGGGCCAGTAGG 58 NA Drosophila melanogaster 61 CG8531 FBgn0033918 FBtr0087538 1 1 1 90 2R 10144854 10144929 TTCTGGGTCTTAAGGGTGG 58 10144983 10145001 GGTATGACACCTTGGTCAC 57 NA Drosophila melanogaster 61 pea FBgn0086895 FBtr0087518 2 1 1 217 2R 10043921 10043995 CAATCAAGCGGAAGGTGAC 59 10044176 10044194 AGATTGCCTTCTGAATGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG16935 FBgn0033883 FBtr0087622 1 1 1 100 2R 9748784 9749141 CATTCAGGGTAAATACCCGG 58 9748703 9748722 CAAAGCCTTTGACTTTGTCG 58 NA Drosophila melanogaster 61 fas FBgn0000633 FBtr0087625 3 1 1 86 2R 9606711 9613059 AGTGTGCGATTTGATTCGG 58 9613109 9613127 CTTGTTGGGATTGTGCGAG 59 NA Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 3 2 2 81 2R 9038329 9038403 CAACGAACGGATCCAAGTG 59 9038266 9038285 CGCTTCCTTAAGGAACTCCA 59 NA Drosophila melanogaster 61 Psc FBgn0005624 FBtr0087798 1 1 1 85 2R 8862096 8864836 AGTGTCTGCACTCCTTCTG 59 8862029 8862047 GTTGATGACCATCTCGCAG 58 NA Drosophila melanogaster 61 Dgkepsilon FBgn0020930 FBtr0087853 1 1 1 81 2R 8646779 8646797 TTTCCACATTGCCCAACTG 59 8646839 8646915 CTTGACTTGTAGCCTTATTTGC 58 NA Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 2 2 2 80 2R 8588060 8588139 GATGTATGAACTAAGTCTACTCCC 58 8588178 8588196 CTCAGCTCGTAGATCTCCT 57 NA Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 2 2 2 80 2R 8516768 8516843 AAAGATCAAAGAGGAACTGGC 58 8516708 8516728 CCAGAAGAGATCATGCTTTCG 59 NA Drosophila melanogaster 61 CG33964 FBgn0053964 FBtr0100005 3 1 1 103 2R 8070988 8071006 AAGAGCAAACAAGAACGCC 59 8071073 8071152 TAGATCCACCTCATGGCAC 58 NA Nonspecific Drosophila melanogaster 61 skpB FBgn0026176 FBtr0088020 3 1 1 212 2R 8027415 8027491 AGAGATGCCCATCATTCGG 59 8027221 8027239 GTAACCACAGGATCGTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pds5 FBgn0260012 FBtr0087974 1 1 1 80 2R 7919489 7919570 ACTGAGAGGAAATTGCAAGAC 58 7919610 7919630 CACAGTCTTGAGATATTCCCG 58 NA Drosophila melanogaster 61 CG13183 FBgn0033667 FBtr0088054 2 1 1 83 2R 7793766 7793857 AAAGCTCTTCAGGGATCAC 57 7793701 7793720 AAGACAATTATCTTGGCCCA 57 NA Drosophila melanogaster 61 CG13202 FBgn0033623 FBtr0088157 3 1 1 101 2R 7243880 7243898 TCTATGAACTGCGCAACGA 59 7243736 7243754 TCACTGGACGAAGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Fpps FBgn0025373 FBtr0088170 2 1 1 80 2R 7194453 7194774 GACTAGCAGAACCTTATCGAC 58 7194393 7194412 CGACTCTCATCTTTCGACAC 58 NA Drosophila melanogaster 61 dare FBgn0015582 FBtr0088176 2 1 1 80 2R 7179487 7179562 GATGCTTTGAAGACTACGGA 57 7179426 7179444 AACCAAATGGACTCGTTCC 58 NA Drosophila melanogaster 61 CG18335 FBgn0033610 FBtr0088177 3 1 1 91 2R 7178420 7178438 AATGGACCACGCTATAACG 57 7178284 7178302 CATAAGTTCGACCCACTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0088211,FBtr0300862 1 2 2 64 2R 6828023 6828041 AATTTGGGTGCGAAGTAGC 58 6827909 6827929 ATCGGGATTCTTCTTAAGGAC 57 NA DesignNoJunction Drosophila melanogaster 61 Hdc FBgn0005619 FBtr0088333 2 1 1 85 2R 6131344 6131678 ATCTCAAGGAAACCAAGGAG 57 6131726 6131744 GTTTACCACCTTAGGCGAG 58 NA Drosophila melanogaster 61 CG15863 FBgn0033467 FBtr0088441 2 1 1 107 2R 5848353 5848371 CACGCGATGGAAGATTACC 58 5847203 5848285 ACAGATTTGGTTTACCAGAACG 59 NA InUTR Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088493 1 1 2 61 2R 5700164 5707357 AGCTCGATTTCAGCTTCCT 59 5700121 5700139 TTCTTGCTGAAGAGGTTGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10459 FBgn0033440 FBtr0088468 1 1 1 60 2R 5595824 5595845 CCTTCAAATACGACTACGACAC 59 5595860 5595884 GATGGTTCCTGAGATACATAAAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 3 2 2 80 2R 5047800 5048139 GTTTCCATGATAGGATTCTCGG 58 5047741 5047761 GGGATTGACCACATAGTAGCT 59 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290278,FBtr0290279 2 2 2 256 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838055 4838073 CACTCCAGACACTCGTCTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG30349 FBgn0050349 FBtr0088650 3 1 1 90 2R 4795394 4795466 AGGGAAAGATTTCTCGAACG 58 4795519 4795537 ACAGTGTATAGGTGGCCAG 58 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088646 2 1 5 90 2R 4788953 4788971 ATTCGTCAACTTTGCTCGA 57 4789025 4789657 GGATCTTAATGGCTGGCAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 2 2 2 80 2R 4496830 4496850 GTGGTACTTTGAGAGGATGGA 59 4496890 4496970 TCATTGGAAATCTTGGCTTCC 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 2 4 4 80 2R 4367409 4367429 TTGTTATTTGCACGGTCTACG 59 4366972 4367369 TGGTGAATCCAATATGCTTCG 58 NA Drosophila melanogaster 61 Cyp4e2 FBgn0014469 FBtr0088745 2 1 1 80 2R 4333754 4333774 GATACTACCACTTCTGGAGTG 57 4333814 4333894 CTCCTTAAATAGTTTGCGCTG 57 NA Drosophila melanogaster 61 CG11635 FBgn0033283 FBtr0088739 2 1 1 61 2R 4246364 4246382 TCAAATGACTTGTGCTGCG 59 4246407 4246425 TACAGCTCGTCGAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34430 FBgn0085459 FBtr0112731 2 1 1 81 2R 3831038 3831058 CCTATGAATTCGACATAGCCG 58 3831097 3831179 GCCATCTGTAGGATTAATATGCC 59 NA Drosophila melanogaster 61 CG1598 FBgn0033191 FBtr0088955 3 1 1 91 2R 3426908 3426990 ACTTGCAGTTCTAGCCTAGC 59 3426836 3426854 GCATCCGATATGTTGTGCG 59 NA Drosophila melanogaster 61 Cyp9b2 FBgn0015039 FBtr0089055 3 1 1 96 2R 3019314 3019396 CGTCAACACAAACTGGTGG 59 3019236 3019255 CAAAGTCCTTTACGCAGACC 59 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 2 1 1 289 2R 2894137 2895248 GATCGTTGGCATCCTACTG 58 2895564 2895582 GATTGGACATATCGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9455 FBgn0033113 FBtr0086162 3 1 1 80 2R 2770128 2770217 GCAGGTACTTAATCAGCTGG 58 2770259 2770278 CCACTTTGCGAGGTAAAGAG 59 NA Drosophila melanogaster 61 CG17266 FBgn0033089 FBtr0086144 2 1 1 80 2R 2563156 2563174 CAGTCCCAACTGAGAAGCT 59 2563028 2563114 TATCATTCGTCCGATTTCCGT 59 NA Drosophila melanogaster 61 CG11211 FBgn0033067 FBtr0086005 1 1 1 80 2R 2068756 2068825 CGTCAACAGGAAAGAACGG 59 2068694 2068713 CAGAAATAGCTCCGATCCAC 58 NA Drosophila melanogaster 61 dpr12 FBgn0085414 FBtr0300553 1 1 1 80 2R 1746003 1746022 TGACGCACATATTTAGGTCG 58 1746061 1746148 CTTAGGTCAGGAAGATATGTCTC 57 NA Drosophila melanogaster 61 CG10465 FBgn0033017 FBtr0086094 3 1 1 89 2R 1228012 1228079 ACTGATTCGGAAGGATGGA 58 1227941 1227960 TAATGGAACAGTGCCATCTC 57 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0086083 1 1 3 104 2R 1182467 1182485 ATGAGTCTTACACCAGCCG 59 1182553 1182629 GACGATTGCCTTTACGTCC 59 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 2 2 3 117 2R 1182467 1182485 ATGAGTCTTACACCAGCCG 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 CR31700 FBgn0051700 FBtr0301969 1 1 1 60 2L 22067103 22067121 GGTTGGGAACCAATCTACG 58 22067143 22067163 TTGGAAGCGTTGTCATTAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4:39B FBgn0003930 FBtr0081489 2 1 1 100 2L 21215150 21215168 AGTGGCAATACCGTAACCA 59 21215068 21215086 GTGGACGGTATTTCACGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33987 FBgn0053987 FBtr0100032 1 1 1 60 2L 22019824 22019844 TTCAACACGAAACTGTCACAC 59 22019863 22019884 CGTTCACTGAATAAATTCCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mtp FBgn0032904 FBtr0081439 2 1 1 84 2L 20920335 20920354 GGGCTTTGTTCAAATCGGAG 59 20920211 20920288 AGGACTGTCGTAAGACCCT 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 3 2 2 125 2L 20760822 20763497 GATTATGTGGCACTTGAAAGG 57 20763584 20763602 CATTGGTACACCTTGTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 3 2 2 89 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729654 20729884 TTCGTCGTTATCCAGTTCCT 58 NA Drosophila melanogaster 61 CG15477 FBgn0032865 FBtr0081380 2 1 1 78 2L 20544654 20544672 CTAATTTGGTGGGACTGCC 58 20544714 20544732 GGACACATCACTAGGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10466 FBgn0032822 FBtr0081291 1 1 1 80 2L 19792441 19792517 GAAAGTCCAAGGGCTTCTG 58 19792561 19792579 TGATGCCATTCAGGTTGTC 58 NA Drosophila melanogaster 61 CG10262 FBgn0032813 FBtr0081262 3 1 1 84 2L 19583866 19583884 TCGTCGATGCACTAAAGGA 58 19583666 19583685 GAGTTGTCCATCGATTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31697 FBgn0051697 FBtr0081250 1 1 1 60 2L 19535932 19535951 GTCTTTCCTCACGAGAACGA 60 19535974 19535992 AGCGTTTGAGTTTGTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 2 2 2 80 2L 19186184 19186263 GCTATAAAGAGAAGGCAAACGA 58 19186303 19186322 ACTCGAATATCCAGGACGTG 59 NA Drosophila melanogaster 61 hk FBgn0001202 FBtr0081180 2 1 1 104 2L 19033335 19033353 TATAGCTTGCTGGAGTGGT 58 19033194 19033268 GAACTGGTTAAGAGCCTGAG 58 NA Drosophila melanogaster 61 Tango6 FBgn0032728 FBtr0081133 2 1 1 83 2L 18971346 18971364 CCTATCAGAGACGGCTCAC 59 18971411 18971489 CAAAGAGGACCCAACTCCT 59 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 1 2 2 103 2L 18862252 18862270 GTATTAGGGACAAGCGACC 57 18862106 18862185 ATTGTAGCAGGTTCTGAGC 57 NA Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021,FBtr0081022 2 2 3 112 2L 17969448 17969466 GCATGAATCCCGAGTACAG 58 17971895 17971913 CATGATGAACTTGTGGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15147 FBgn0032654 FBtr0080988 2 1 1 60 2L 17626054 17626073 TCCAGCTAAGGATCAACGAC 59 17626013 17626032 GCAATAGCAACCTCAAAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5131 FBgn0032644 FBtr0080984 2 1 1 151 2L 17485089 17485109 GCAATAACGACATGGACTTCC 59 17485222 17485313 CTTGACGCAGTTCTGATGC 59 NA Drosophila melanogaster 61 CG32832 FBgn0052832 FBtr0080960 1 1 1 104 2L 16878865 16879024 TTAAATGGTCCTTGGTGCTG 58 16878780 16878798 AAATTAAGCCCGTGACTGC 58 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940,FBtr0080942 3 3 3 86 2L 16724284 16724302 GATGCCATCATCCTTTCCG 58 16724156 16724234 GAGTTGTTCCAAGACGTGC 59 NA Drosophila melanogaster 61 CG31823 FBgn0051823 FBtr0080810 3 1 1 185 2L 15899210 15899308 CCAGCGAATCAAATAGTTACCA 58 15899046 15899064 CAGCATCCCTTCAATCCGA 59 NA Drosophila melanogaster 61 CG33310 FBgn0053310 FBtr0080698 1 1 1 60 2L 15028868 15028889 TTTGATCCTAGAAACAGCACAG 58 15028908 15028928 CCAGAAGAGCCATTATACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463,FBtr0114462 1 2 3 106 2L 14274843 14274863 CGAAAGAATCAAGTTGGTTGC 58 14274929 14277321 TGAATTCCACTGAGATTGGTC 58 NA InUTR Drosophila melanogaster 61 adat FBgn0028658 FBtr0080573 2 1 1 134 2L 13810518 13810594 TCCCAGAAGAATTAAGGCCC 59 13810403 13810427 CCAACTCTAGAAATGTAAGGAACAG 59 NA Drosophila melanogaster 61 p38b FBgn0024846 FBtr0080534 2 1 1 169 2L 13780760 13780880 GAGATCAATGTTGAGGCCG 58 13781013 13781031 AGCTTGTAGAATTTGGCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10859 FBgn0032520 FBtr0080522 1 1 1 80 2L 13396799 13396884 TCATGATGTCGATGTTTGAACG 59 13396740 13396762 GCTTCTTCAACTTGATCTCTTCC 59 NA Drosophila melanogaster 61 betaCop FBgn0025724 FBtr0080469 3 1 1 80 2L 13380047 13380065 AGCCAGCAATGTCTATGGA 58 13380108 13380189 TCTTTAGATTGACCTGCTGC 58 NA Drosophila melanogaster 61 Nnp-1 FBgn0022069 FBtr0080473 1 1 1 60 2L 13365041 13365059 TTTAACAGCAAGAGACGCA 57 13364999 13365020 TCTGGTAAGTCTCAAAGATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15480 FBgn0032489 FBtr0080482 1 1 1 60 2L 13225180 13225200 CCTTCGAACATGGATTACCAC 59 13225140 13225159 ACTTCTTGTGGGTGTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9426 FBgn0032485 FBtr0080484 2 1 1 80 2L 13217719 13217739 AGGGTCTCATTTACATTGTCG 58 13217600 13217678 TTGTCACTGGATTGAAGCTG 58 NA Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 3 2 2 60 2L 13164196 13164326 CCTTCGATACGACCTGTCC 59 13164154 13164173 TTCTTGTCGTCCCTTATGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG15483 FBgn0032457 FBtr0080402 2 1 1 134 2L 12761222 12761240 GTCAATATGGGACGCAACG 59 12760993 12761124 AATTCCAATCACTTGGCGG 58 NA Drosophila melanogaster 61 Rab6 FBgn0015797 FBtr0080361 3 1 1 60 2L 12108551 12108570 TGATACCCTCGTACATACGC 59 12108510 12108530 GTGTTGGTGATATCGTAAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 crol FBgn0020309 FBtr0080260,FBtr0080263,FBtr0080261 1 3 4 138 2L 11797737 11797845 AGTGAAACCGATCATAATTCCC 58 11797620 11797638 GAGCGTAGAGGTAACCAGG 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 1 3 4 81 2L 11799399 11800169 TACTTTGGCATACAGGCGA 59 11799336 11799354 TGGTTAAGCAAGTGCTCCT 59 NA Drosophila melanogaster 61 CG14931 FBgn0032374 FBtr0300370 1 1 1 86 2L 11788698 11788717 AATTAGCAAGTGTCGTGCAG 59 11788766 11788849 AATCAGACTCGCTCTCGTG 59 NA Drosophila melanogaster 61 CG14926 FBgn0032360 FBtr0080251 2 1 1 124 2L 11343036 11343108 TACTCACAGATGGGAAGGG 58 11342930 11342948 TTATTCTGGTGCGATCCCA 58 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 3 4 4 104 2L 11258903 11258988 GGAGAATACATTCGGCATGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 3 3 3 168 2L 10976155 10976262 GACTTGTGAACAGGCTCCT 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG12517 FBgn0032311 FBtr0080144 2 1 1 70 2L 10870277 10870295 TCATCTGTATCGAACGCTC 57 10870327 10870347 GTAAATCCCATTATCCGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17139 FBgn0260454 FBtr0100836 2 1 1 60 2L 10844747 10844823 AGAAGTCGGACTGAAATTTGAG 58 10844708 10844728 AATGCGCTGGAATATTGATCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17118 FBgn0032291 FBtr0080111 1 1 1 81 2L 10730366 10730443 ACAACTGGTCTTCCTATACCA 58 10730486 10730504 ATTATCTCGAGCACCAGGG 59 NA Drosophila melanogaster 61 ppk10 FBgn0065110 FBtr0100097 2 1 1 82 2L 10451065 10451084 CTGATTATGCCTACGATGGT 57 10450940 10451020 CGTGGTATCTTGCTCTAGG 57 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 3 1 1 149 2L 10426576 10426597 CACTCGATTTATTCTTCATGCC 58 10426079 10426097 CCCGATAATTCAGGTGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ip259 FBgn0025366 FBtr0080017 3 1 1 191 2L 10408373 10408743 GTTGCCGAAGCAAGATCTG 59 10408897 10408916 AAAGAGTTTGGCCTTGATGC 59 NA InUTR Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 2 2 2 80 2L 10383735 10383754 AATATGCGACGAACTTGACC 58 10383795 10383880 AAGGTGGAAATACATTGTCGC 59 NA Drosophila melanogaster 61 CG5727 FBgn0032193 FBtr0079958 1 1 1 80 2L 10210271 10210291 ATCGGACGTTCCAATCTATCC 59 10210154 10210231 TTCCTCTGAGTGTACTTCCTG 58 NA Drosophila melanogaster 61 Cpr31A FBgn0053302 FBtr0079936 3 1 1 75 2L 10054305 10054323 CTTCATCCTCGAGCAAACC 58 10054362 10054874 AAACAGTCAGGAGTTTGCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cpr31A FBgn0053302 FBtr0079936 1 1 1 105 2L 10054274 10054292 AAAGTCATCGCAACCTGTG 58 10054361 10054873 AACAGTCAGGAGTTTGCCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4598 FBgn0032160 FBtr0079877 1 1 1 80 2L 9919100 9919179 TTGACTTCGTCTAGCTCCA 58 9919223 9919241 GCGAATCCTGTCCTTATCC 57 NA Drosophila melanogaster 61 CG13120 FBgn0032142 FBtr0079923 2 1 1 80 2L 9766555 9766624 TATTCCCAATTTCTGACCAAGC 59 9766496 9766517 GGAATTCGATTCAAAGACAACC 58 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 1 2 2 86 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571744 9571850 TGATTATCCCTGTTGCGGT 59 NA Drosophila melanogaster 61 Cpr30B FBgn0032125 FBtr0079831 3 1 1 232 2L 9542958 9543049 AGTTACCTATTTGTTGTGCCTG 59 9543242 9543260 GATCATCCGCCTTGTACTG 58 NA DesignNoJunction Drosophila melanogaster 61 scat FBgn0011232 FBtr0079809 2 1 1 115 2L 9431890 9432287 CGACTTCGTCAATCACCTG 58 9432366 9432384 GATCTGAGACTCCGTCCAG 59 NA Drosophila melanogaster 61 CG34441 FBgn0085470 FBtr0112745,FBtr0112744 1 2 2 60 2L 8527338 8527357 AGCCTTGCCTAAGATGACAG 59 8527297 8527315 CCTGGAATTCACAACTCCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13096 FBgn0032050 FBtr0079698 3 1 1 148 2L 8510541 8510560 TTTGTCAGGACAGGCTACTG 59 8510064 8510082 TTGACAACTGCCTGAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mur29B FBgn0051901 FBtr0079607 1 1 1 80 2L 8354736 8354756 TAAGCACTTCAACTTCTTCCC 58 8354798 8354889 CACGGTTTAACTCTCCGTC 58 NA Drosophila melanogaster 61 Trf FBgn0010287 FBtr0079542 2 1 1 155 2L 8072980 8072998 CACTTTAAAGTCGCGGACG 59 8073112 8073206 CACGATATTCTGCAATCGTATCTC 59 NA Drosophila melanogaster 61 Spn28D FBgn0031973 FBtr0079549 2 1 1 91 2L 8005550 8006439 GACTACAGACGGGTGATCG 59 8005477 8005498 TTGATATTGTATCGTGCTGTCG 59 NA Drosophila melanogaster 61 CG13793 FBgn0031935 FBtr0302518 1 1 1 81 2L 7719032 7719050 ATCCATTCCTACATGGGCC 59 7718909 7718990 AACCCATGCCTTTAAATAGAGG 58 NA Drosophila melanogaster 61 iHog FBgn0031872 FBtr0079365 2 1 1 144 2L 6948539 6948557 TTATTAACTGCGCAAACGC 57 6948344 6948362 AAACCGGAATTGCTTCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10158 FBgn0031871 FBtr0079366 2 1 1 149 2L 6945161 6945179 GAAGCTGTTACGCTAGGGA 59 6944966 6944984 TTATAATCTGGCCCACGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 1 2 2 80 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469926 6469944 ATTCCCTTGGGATGATCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 3 2 2 80 2L 6447229 6447309 GTCAACGAGTATCTTGGAACC 58 6447169 6447187 GACCGAAGTGCTGAAATCG 59 NA Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079208,FBtr0079207 2 2 2 139 2L 6154021 6154658 GAAATTTAATACCAGCTCGGAC 57 6153903 6153922 GGTGGACAAATTTGTTAGGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Arc-p20 FBgn0031781 FBtr0079200 3 1 1 95 2L 6125671 6125689 GATCGACAAGGAGATCAGC 57 6125748 6125834 GTTGCCTTCACCTAGAACC 58 NA InUTR Drosophila melanogaster 61 Arc-p20 FBgn0031781 FBtr0079200 2 1 1 95 2L 6125670 6125689 AGATCGACAAGGAGATCAGC 59 6125747 6125833 TTGCCTTCACCTAGAACCG 59 NA InUTR Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 3 3 3 185 2L 6049339 6049424 AAGAAACAAGATGCTCGGC 58 6049573 6049591 CTCGATCCGAAGTATCCGT 58 NA Drosophila melanogaster 61 CG3036 FBgn0031645 FBtr0077391 1 1 1 113 2L 4902299 4902317 CATCATCTGTCACGGACTG 58 4902393 4902477 GACGAGAACAAACCATTCTG 57 NA Drosophila melanogaster 61 mRpS2 FBgn0031639 FBtr0077408 3 1 1 266 2L 4850278 4850353 AATCGTTTGCCAACCTACC 58 4850030 4850048 GATGACCTAATCGACTGCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11929 FBgn0031620 FBtr0077377 2 1 1 140 2L 4682861 4682881 TGACAGCACAGCAAATTAGAC 59 4683038 4684523 CCATGGAAGCATCAGTGGA 59 NA Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077463 3 1 2 147 2L 4382639 4382710 AAACAAACGACTAGGGCGA 59 4382510 4382528 TTGGTCCCTTATGCTTGGT 59 NA InUTR Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0077507 3 1 2 104 2L 4007888 4008751 CACTACTACATTTGTACCATGCG 59 4008815 4008833 ATCATGCGACGACATTTGC 59 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 3 4 4 81 2L 3780567 3781913 TGAGGGATCACAGGTATATTCAC 59 3781953 3781972 GTTCTCGATTGGCAGAATCC 59 NA Drosophila melanogaster 61 CG16704 FBgn0031558 FBtr0077550 1 1 1 120 2L 3692498 3692516 CTCATCTGCTGTCTTGTGG 58 3692281 3692299 TATCTGGGCGATAGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 1 2 2 83 2L 3473693 3473776 AACTACAATTGGCTGCCTC 58 3473821 3473841 CGAAATAGTATCCACCATGGG 58 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608,FBtr0077609 1 2 2 80 2L 3276463 3276541 TGATAACGGGCATGATCCT 58 3276401 3276419 TGTCCAGATCCATCGAGTG 58 NA Drosophila melanogaster 61 CG9867 FBgn0031421 FBtr0077767 1 1 1 85 2L 2382289 2382359 CACCCATAATCCAAGGCTG 58 2382408 2382426 CTTGTAGGGAATCTGCAGG 57 NA Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 2 2 2 116 2L 2309692 2310136 GATTTCCTCAACGATTACAGCA 59 2309597 2309615 ATTATCATCCCGCCGATGG 59 NA Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 1 1 1 65 2L 1501855 1501933 GGATGTTCCTGTGGAAACC 58 1501808 1501826 CGTTTGGTCAACGTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42329 FBgn0259229 FBtr0299796 2 1 1 82 2L 1229175 1229260 ACTACGACGCTATTCTCCG 59 1229306 1229324 CACCTCAACACAAAGGTGC 59 NA Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 1 2 2 169 X 11005434 11005515 ACGAGGATCAGAAACTCGG 59 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 CG3630 FBgn0023540 FBtr0070385 2 1 1 81 X 2062228 2062246 GACGTATCGCATGAACTGG 58 2064846 2064864 CCTGGTTGTTGAACATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442,FBtr0273443 2 2 4 80 X 211950 312518 GTTTATTCGACGAATTTCCGG 58 211890 211910 ACTTTAGTACAGTGATTGGCG 58 NA InUTR Drosophila melanogaster 61 wts FBgn0011739 FBtr0085720 1 1 1 80 3R 26617794 26617813 ACTGGCCAGATTCTACATCG 59 26617670 26617754 TTGATGTCTCTGTGAATGAAGC 59 NA Drosophila melanogaster 61 CG34273 FBgn0085302 FBtr0112468 1 1 1 60 3R 10342922 10342942 TCGTCCTCTTCATCTAGTTCG 59 10342964 10342982 ACTTCAGATTGCTGAGACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081931 2 1 2 87 3R 4646091 4646112 TAGACGGTGGTGTACATAAGAG 59 4644977 4646043 GTGCTGATCAGACAAAGGC 59 NA InUTR Drosophila melanogaster 61 hd FBgn0086695 FBtr0078802 1 1 1 101 3R 1200100 1200179 CAGATGACTTCATCAAACTGC 57 1200019 1200037 CATCCACTTGGTGTCTTGG 58 NA Drosophila melanogaster 61 CG7369 FBgn0037188 FBtr0078530 2 1 1 81 3L 22740185 22740264 AGACTGAAGAAGACGTGGG 59 22740307 22740327 TGAAGTTCGATGTTGGATCCA 59 NA Drosophila melanogaster 61 CG7692 FBgn0036714 FBtr0075215 2 1 1 142 3L 17346707 17346725 CAACTGGTCGTACGTTCTG 58 17346829 17346904 GGAAAGCAACTTCTTCTCCTG 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 1 3 3 82 3L 8181670 8182394 GACTGGATGGGTTACTCGT 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 1 2 2 80 3L 570189 570272 TTCTGGAGCAGGTATTGACTG 59 570314 570332 TGATGTTCTCGGGCTTCAG 59 NA Drosophila melanogaster 61 CR42646 FBgn0261429 FBtr0302350 2 1 1 150 2R 1253052 1253129 ACTCCGCTCATTTGGACTC 59 1253242 1253261 GAACTGTTCCTAGGATCCGG 59 NA Drosophila melanogaster 61 CG10321 FBgn0034643 FBtr0071660 3 1 1 243 2R 17522472 17522889 ATAAATACAGCGCAGCCTC 58 17523096 17523114 GTCTTGAAGGCGTGATTCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33137 FBgn0053137 FBtr0087733 2 1 1 99 2R 9062699 9062905 ATGACAAGCGCTTATGCTG 59 9062967 9062986 GTTTGTAGACGATGTTGGGT 58 NA InUTR Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047 3 1 2 80 2R 7869380 7869398 TCTAAAGCACATTAGCCGC 58 7869251 7869338 GTCGTGGTAATGAAGGTATCG 58 NA Drosophila melanogaster 61 CG32986 FBgn0052986 FBtr0079734 3 1 1 60 2L 8863494 8863515 TTGGTGTACTTCACGTTATTGG 59 8863536 8863554 CCTGAGCATGGTAAACGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pgk FBgn0250906 FBtr0077739 2 1 1 93 2L 2748357 2748377 CCTTCAATAAGCTGAGCATCG 59 2748220 2748238 ATCTTGCCCTCCTTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Or22b FBgn0026397 FBtr0077874 2 1 1 80 2L 1523522 1523681 ATATTGGACTATGTCGACGC 58 1523721 1523742 CAGTACAATACCGATCAAGAGG 59 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 3 3 3 87 2L 862622 862640 AAGATTGTGCTGGTCACCT 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG4749 FBgn0031308 FBtr0077959 2 1 1 60 2L 1148154 1148172 AGGATCGGGTAAAGGACAG 59 1148195 1148214 ATTTCATGACGTGATTTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3862 FBgn0031286 FBtr0078038 2 1 1 60 2L 825375 825396 CCTTGACGTGATCATTTATCCT 58 825336 825355 GTCTGTTTCTCCCTGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077849 3 1 2 119 2L 2191941 2191959 GACCTATGTGAATGAGCGC 58 2190775 2191858 ACATCGGGAACTTTCAGGA 58 NA Drosophila melanogaster 61 CG33671 FBgn0061359 FBtr0091650 1 1 1 60 2R 8522857 8522875 CGTGGTCTATCATCGTCCC 59 8522815 8522834 AAATCTCAGAGTAGTGCCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16972 FBgn0032481 FBtr0080488 2 1 1 92 2L 13202402 13202555 TCGAGATCAACGACTCACC 59 13202328 13202346 CGAACTGGTCAACATTGCC 59 NA Drosophila melanogaster 61 CG31955 FBgn0051955 FBtr0077540 1 1 1 80 2L 3712544 3712565 GTGTTTATGAATACAGTGAGCC 57 3712433 3712505 GCTGGTGGAGTATATTGTAGG 57 NA Drosophila melanogaster 61 Him FBgn0030900 FBtr0074549 1 1 1 92 X 18103821 18103839 ATTTCTAGCCGAGAATGCG 58 18104288 18104308 TCCTGATCGTTATCCTGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 Orct2 FBgn0086365 FBtr0084598 2 1 1 60 3R 20099485 20099504 TACCTCAATAGTGCGGTGAC 59 20099527 20099545 TAGCTGCCATGAAATCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6885 FBgn0036810 FBtr0075053 1 1 1 60 3L 18738242 18738261 AACGCAACAGAAGTCATTGG 59 18738282 18738302 AAAGTTGTGCTAAATCGGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED19 FBgn0036761 FBtr0075160 3 1 1 96 3L 17838900 17838918 GTGGAAAGGAGCTTCTTCC 58 17837963 17837985 GTGACATATGTGGTACGATACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7372 FBgn0036522 FBtr0075570 3 1 1 117 3L 15614595 15614613 GCAGTTGGACAAGAGTGAG 58 15614694 15614770 ATTGGTGGGTTCCTCTGTC 59 NA Drosophila melanogaster 61 ste14 FBgn0036336 FBtr0075876 3 1 1 120 3L 13012048 13012066 GCAGTTCAAGAGATACGGA 57 13012150 13012296 ATTCTGGACCAAGTGAGTG 57 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072923 2 1 3 153 3L 2490481 2490993 GAAGAAAGAGTGATGTGATGTC 57 2491106 2491125 CATGCTCGCTTTGTTATCAC 58 NA InUTR Drosophila melanogaster 61 CG12914 FBgn0033499 FBtr0088334 1 1 1 105 2R 6136356 6136458 CGAGCGTGTTTGTCATAGTC 59 6136526 6136544 TTGAGGTAGTACAGCTGGC 59 NA Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 2 2 2 80 2R 16391212 16391293 TGGTCTCCATACAGAGTCTC 58 16391336 16391354 CCTGGCTGATGTTATTGCT 57 NA Drosophila melanogaster 61 Amy-p FBgn0000079 FBtr0087004 3 1 1 91 2R 13007775 13007796 GAACTTCCATCTGGAATTACCA 58 13007705 13007723 TAGTTGGTGTCGAATTGGG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG15313 FBgn0030173 FBtr0071418 3 1 1 75 X 9943867 9943941 AAGCCGTCAATTGATCCCA 59 9943980 9943998 ACCGGATGTGGTTGTAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30466 FBgn0050466 FBtr0087339 3 1 1 84 2R 11460249 11460324 TCATGTCTAATGAGGATCCCA 58 11460370 11460388 TTTGGATGCTTCATGTGCA 58 NA Drosophila melanogaster 61 NfI FBgn0042696 FBtr0089141 3 1 1 80 4 296249 296270 CTTTAAGAGGCTGTATGATCGA 57 294527 296210 AAGGGTGAAATTCATCCTGTC 58 NA Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 2 2 2 153 3R 20954241 20954259 AAACAACGGAAGAAACGCC 59 20954374 20954465 TCTTGAGCATCCTTTACTGCT 59 NA Drosophila melanogaster 61 CR34311 FBgn0085340 FBtr0112509 3 1 1 148 X 20254908 20254926 ATAAGTCTGCCCAGACTGC 59 20254722 20254798 CTTTGAGTTCAGTATTCCGCG 59 NA Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337,FBtr0070095 2 2 2 197 X 375435 375453 AGATGCTATCAGGAGTGCG 59 375193 375278 GATAGTTCAACGAGTGACAAGAG 59 NA Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070635 1 1 2 82 X 3756107 3756125 GAGGCTACATTCTTGCCAC 58 3755973 3756064 GCTAATTTCACGAGAAGTTTCC 58 NA Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 1 2 2 81 X 22386913 22387149 CACCATCAAATTTCAACCACC 58 22386852 22386870 AAGTTCACGATTCTTGGGC 58 NA Nonspecific Drosophila melanogaster 61 NPC1b FBgn0031140 FBtr0077239 3 1 1 81 X 20807146 20807320 TCAGACATATTTCACCCACGA 59 20807357 20807381 GACTTCCTTTAGGAAGTTATACTCG 59 NA Drosophila melanogaster 61 CG9570 FBgn0031085 FBtr0070002 1 1 1 65 X 19946057 19946075 ATCCTGATGAAGTGCAGCT 59 19946104 19946122 GTTAGCAATCAGTGGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14231 FBgn0031060 FBtr0074814 1 1 1 125 X 19595669 19595687 CTATGTCCTGGGCATCGAG 59 19595507 19595580 ATAATGCCTCCATAGCGGG 59 NA Nonspecific Drosophila melanogaster 61 CG14227 FBgn0031058 FBtr0300350 3 1 1 84 X 19582289 19582377 GTGCAGTATTCAGACTTCGTG 59 19582225 19582243 AGACGGTCAACTGGAATCG 59 NA Drosophila melanogaster 61 Mur18B FBgn0030999 FBtr0074672 1 1 1 128 X 19107404 19107422 AAGCTATCCACAGTCCTGC 59 19107584 19107602 ATCATCGCTCCATAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 2 4 4 80 X 16602454 16602473 ATTCTGCCCACAATGAATCC 58 16602514 16602593 GGCATTATATCTTCCTTGGCC 59 NA Drosophila melanogaster 61 Or13a FBgn0030715 FBtr0074133 1 1 1 80 X 15870532 15870551 AACAGCCTGTAAGGATTACG 57 15870591 15870683 TTATCGAGGTACTTAGAATGGC 57 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074106 1 1 6 80 X 15754269 15755416 AAGTTAACACTGCGTAACACAG 59 15755457 15755475 ATGATCACGCTTGCATACG 58 NA InUTR Drosophila melanogaster 61 CG7872 FBgn0030658 FBtr0074046 3 1 1 60 X 15473151 15473170 ACGATACTCTCGTTCATCGT 58 15473193 15473211 GCTTCATTACCGTGTAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7872 FBgn0030658 FBtr0074046 2 1 1 60 X 15473357 15473375 GGCAGAACAGGAAGAGGAG 59 15473399 15473417 GTACGCCTTGTATCGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9030 FBgn0030599 FBtr0073971 2 1 1 82 X 14848370 14848389 AACAGGACTATAGGCAACGG 59 14847735 14848330 GGTTTAGACATAGAAAGGACACAG 59 NA Drosophila melanogaster 61 CG1463 FBgn0030406 FBtr0073657 1 1 1 126 X 12505494 12505564 TAAGACCAGAACTATGCGC 57 12505386 12505406 GAGCTCCTTCTTATGGATCTG 57 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 3 2 2 112 X 12416749 12417558 CAATTCAGACTCCTCGGCT 59 12416655 12416673 GTTGTGAAGCACTCTGGAC 58 NA Drosophila melanogaster 61 Chrac-16 FBgn0043001 FBtr0073642 3 1 1 62 X 11911629 11911649 CAAGAATCTGGAGTTTCTGCT 58 11911587 11911605 TCCTGGAACTGGTGTACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Chrac-16 FBgn0043001 FBtr0073642 2 1 1 61 X 11911628 11911648 AAGAATCTGGAGTTTCTGCTG 58 11911587 11911605 TCCTGGAACTGGTGTACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 t FBgn0086367 FBtr0071335 3 1 1 84 X 9112673 9112691 GACCGCAAGAATGAGTCTC 58 9112549 9112628 GAATGCGATCGAATTGATTGAC 58 NA Drosophila melanogaster 61 CG11294 FBgn0030058 FBtr0071224 2 1 1 82 X 8587339 8587357 ACTATCCCGACGTCTTCCT 59 8586765 8587293 ATTCTGGAACCACACCTGG 59 NA Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 3 2 2 277 X 8375952 8375971 GAGATCGACCTACATTTGGG 57 8376437 8376455 GAATGTTCTGGTCGGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 nAcRalpha-7E FBgn0015519 FBtr0289988 1 1 1 80 X 8177182 8179058 GAGCACAAGGGTGAAAGAG 58 8177120 8177139 ACGGCTATTGTGAAGATCCA 59 NA Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 2 2 2 118 X 7235525 7235615 TACTTGTTTAAGGCTGTGGAC 58 7235695 7235713 ATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 CG33668 FBgn0053668 FBtr0302418 3 1 1 68 X 6313334 6313411 TTGACTACTCCGAAGCGAG 59 6313284 6313302 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0070823 3 1 4 222 X 5796022 5796042 CGGTTTATTCCAGTCATTCCT 58 5796819 5796837 ACAATCGATGGGAAGACGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4194 FBgn0025627 FBtr0070328 2 1 1 62 X 1962670 1962689 TGTTTGCTTATGATCCTGGG 58 1962714 1962732 CAGTTCCTGAGGATTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 3 2 2 96 X 1758265 1758283 ATATTCAAGCAACAGCGGT 57 1758125 1758208 CGCAGAGGTTTAGTAAATATGC 57 NA Drosophila melanogaster 61 CG3704 FBgn0040346 FBtr0070188 1 1 1 142 X 834106 834192 TGAACAAGATCGACCTAAAGGA 59 833985 834003 GTAGAAGGTGTCCAGGGTG 59 NA Drosophila melanogaster 61 CG13369 FBgn0025640 FBtr0070115 1 1 1 80 X 518363 518443 CATTGGCAACATAGAGCAC 57 518487 518505 CCCAGAGTTATGATCACCG 57 NA Drosophila melanogaster 61 CR40668 FBgn0085764 FBtr0114214 2 1 1 79 U 9469954 9469973 ACGAGCACATATTGTTTCCC 58 9470014 9470033 TTAGATCCGTAACTTCGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40685 FBgn0085767 FBtr0114217 1 1 1 60 U 9461034 9461052 TGAAGAACGCAGCAAACTG 59 9460992 9461012 AATGTCGATGTTCATGTGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 3 4 4 110 4 1210218 1210237 GAACCGATTTGAGAACGGTG 59 1210307 1210519 GCTTTGCTTATTCCAGATTCGA 59 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0089793,FBtr0301341 2 3 3 80 4 763165 763420 CTGTTGTGGAAGACTCGAC 58 763462 763482 CTCCCTTGTAGAACTTGAACG 58 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085841 3 1 4 136 3R 27574766 27574940 GAATATCAGAAACGCACTCCC 59 27575038 27575056 GTTCCTCGAGTGCTAGACC 59 NA Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 3 3 3 80 3R 27502874 27502962 ACGCTTTAATATTCCTTTGCCC 59 27503002 27503021 GGTACTTGCTTCTGATGCTG 59 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085744 2 1 3 149 3R 26886213 26886232 ATTGTGGCAGAATCAATCCA 57 26884336 26886101 GTATTCGAAGGGTTCGTGG 58 NA InUTR Drosophila melanogaster 61 CG15543 FBgn0039799 FBtr0085700 3 1 1 60 3R 26569388 26569406 TCTAAGCTCCTACCTCAGC 57 26569430 26569448 GAAACAAGGTGACGCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31013 FBgn0051013 FBtr0085671 3 1 1 81 3R 26471301 26471372 ATAATTCGCAGTCAACTCCT 57 26471239 26471257 GCGGATTGGACAAATAGGA 57 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746 1 1 2 186 3R 25999043 25999124 TCATGGATATCGCCAACGA 59 25998875 25998893 TTGTCACCGTCGATGAGAC 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 2 5 5 81 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871275 25871293 GGGCATCAGATACTGTCCC 59 NA Drosophila melanogaster 61 CG7911 FBgn0039735 FBtr0085606 1 1 1 103 3R 25830095 25830113 GGAGTACATCGTCCACTCG 59 25829864 25830028 TTATGTTCGTCTCCGCCTG 59 NA Drosophila melanogaster 61 CG31202 FBgn0051202 FBtr0085510 2 1 1 60 3R 25755623 25755643 TCCGTTTATGAACTGACATCC 58 25755583 25755602 CGGTGAGGGAATATAGAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14526 FBgn0027578 FBtr0301945 2 1 1 60 3R 24710900 24710921 AACATCCTGATAGAGAACACCA 59 24710939 24710960 AAATGTAGAAGGGTTGTAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0113296,FBtr0085147 1 3 3 80 3R 22885910 22885991 AAAGTGCATGAGTTCAAGGAG 58 22885850 22885872 GGTGATGTAGACAATGTCATCTG 59 NA Drosophila melanogaster 61 Mst57Da FBgn0011668 FBtr0084914 2 1 1 89 3R 21657583 21657603 CCGATATGAAGTTCCTAGCTC 57 21657514 21657535 CGTTGTGATTTGTATTCTGGCT 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 HdacX FBgn0051119 FBtr0084734 2 1 1 115 3R 20681660 20681734 ACATTCACAAGCTCCTGTG 58 20681563 20681584 TGACTTTAGGTATTCCCTTGTG 57 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056,FBtr0290057 2 4 4 81 3R 19440925 19441935 CCAATACAGCATGTTGTGCA 59 19440863 19440884 TTAAGGCCTTGATATCGTTTGG 58 NA Drosophila melanogaster 61 CG31156 FBgn0051156 FBtr0084277 1 1 1 80 3R 18435193 18436454 GTTGTGGAAAGTATTGTCGGAG 59 18435134 18435156 CTGCTTGATGCTAGCTATAAAGG 59 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 3 2 2 82 3R 16955074 16955160 CTTTGCATGCATGTATTGCG 59 16955011 16955032 CAATGCCTGGGTATTAACAGTG 59 NA Drosophila melanogaster 61 Pros28.1A FBgn0017557 FBtr0083928 3 1 1 60 3R 16574331 16574354 CGGTATATCGTGTCTAATAGGAGG 59 16574294 16574313 GGTATGAAAGAGACGTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 3 4 4 87 3R 14810829 14834235 TCACAGTTCCTGAAAGCGA 59 14834286 14834304 GTAAAGAGCTCCTGCTGGA 59 NA Drosophila melanogaster 61 CG14303 FBgn0038633 FBtr0083659 2 1 1 80 3R 14472103 14472229 TCCCGACGGTTATGTTCTC 59 14472270 14472291 GGGAGGACAAATAATTGATCCC 59 NA Drosophila melanogaster 61 CG7146 FBgn0038593 FBtr0083601 3 1 1 83 3R 14098801 14098876 TATTGAGCTGACGCAAATCTC 58 14098738 14098757 TCTTTCGCATAGAGCATGTG 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 2 3 3 108 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636027 12636045 GGAAGCGAGTGTAGGTCTG 59 NA Drosophila melanogaster 61 mRpL9 FBgn0038319 FBtr0083084 1 1 1 65 3R 11156508 11156526 TTTGCTTAAATCGGCCACC 59 11156612 11156630 TATTTGCGCTTCAGGACGA 59 NA DesignNoJunction Drosophila melanogaster 61 Set FBgn0014879 FBtr0083062 2 1 1 141 3R 11090548 11090572 CAGTATTATCTGGTACCTGATATCG 58 11090668 11090752 TTTACTTGTCATCCTCATCCTC 57 NA Drosophila melanogaster 61 CG12402 FBgn0038202 FBtr0082914 1 1 1 80 3R 9931906 9931925 CGCCTCAGTTTGGATAACTG 59 9931782 9931866 TCTCAGTCTTGTCTGGTATTGG 59 NA Drosophila melanogaster 61 CG14372 FBgn0038156 FBtr0100458 3 1 1 88 3R 9286160 9286752 ATCACGGTTTCGCATACAC 58 9286803 9286822 GCATTTACGGCGAATATCAC 57 NA Drosophila melanogaster 61 mthl12 FBgn0045442 FBtr0082746 2 1 1 80 3R 9179837 9179855 TAAGGGAACAGTTTCAGCC 57 9179898 9179974 GTATGGATCCGTCCTTTAGG 57 NA Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082721,FBtr0082720 2 2 2 62 3R 8822946 8822966 AGATGTCCAAGGGAAAGACAG 59 8822904 8822922 AGCTCTGGTAGCACATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 1 3 3 80 3R 8795400 8795423 TGACGAGGATATAAAGACCTACTC 59 8795253 8795362 CTGCTGCCATACTTCTTCTC 58 NA Drosophila melanogaster 61 GstD2 FBgn0010038 FBtr0082569 1 1 1 60 3R 8198220 8198240 AGTTAGTGAGTTCGACTTCAG 57 8198262 8198280 CTTGGCATTGTCGTACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3942 FBgn0038008 FBtr0082561 3 1 1 60 3R 8080715 8080733 AATTAAGGCAGGGAACCAG 57 8080755 8080775 GACACATAGATTGGTCACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14694 FBgn0037845 FBtr0082298 2 1 1 80 3R 6685004 6685022 GAATCCTGGCTCAGATGGT 59 6684879 6684960 CAACTTGAGAGGTGACGGT 59 NA Drosophila melanogaster 61 Teh1 FBgn0037766 FBtr0082151 2 1 1 128 3R 5690791 5690809 ATAACGGTCATCTCGTCCA 58 5654508 5690702 CGAAGTATCACTGAGATTCTCG 58 NA Drosophila melanogaster 61 Dh FBgn0012344 FBtr0082080,FBtr0112870 1 2 2 121 3R 5469412 5472752 AACTCACAGGATGACTTTCTG 58 5472835 5472853 TTCTCCTTCATTTGCCTGC 58 NA Drosophila melanogaster 61 CG9836 FBgn0037637 FBtr0081930 1 1 1 87 3R 4648787 4648997 AGAGCTCTGTGAGTGATTGG 59 4648719 4648743 CCAGCTATCCTTTAGTATCAATGAC 59 NA InUTR Drosophila melanogaster 61 CG7900 FBgn0037548 FBtr0113204 1 1 1 80 3R 3919986 3920004 CAATTAGGAGTCGCCTGCT 59 3920048 3925761 ACTCCACCGATGTTAGCTG 59 NA Drosophila melanogaster 61 alpha-Est5 FBgn0261393 FBtr0081547 1 1 1 80 3R 3361937 3362019 ATGTCAAAGGAAAGCCTGG 58 3361875 3361895 GTAAAGACTAAGGCGTTTGAC 57 NA Drosophila melanogaster 61 CG32468 FBgn0052468 FBtr0081592 2 1 1 88 3R 3140509 3140527 TTTCCATAGTCGGGCAGTG 59 3139401 3140459 TACATGTTGTATACTTCGCGC 59 NA Drosophila melanogaster 61 CG14668 FBgn0037320 FBtr0078801 2 1 1 61 3R 1212788 1212806 CAATCCTCTCGAGAACGAC 57 1212745 1212763 TATCATGCTCGTTCTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 2 1 1 143 3L 22463769 22463790 CAATTAGATTGCCGTTAAGGTG 58 22463894 22464984 AGACAAGAGCCAGAAACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Csas FBgn0052220 FBtr0074911 1 1 1 105 3L 19981431 19981508 GCTAAGAGATCACATTATCTGCG 59 19981348 19981367 TATCACCCTGCCAATCTTGG 59 NA Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075057,FBtr0075056 1 2 2 61 3L 18814760 18814778 TGTGACTCCCGATGAAGAG 58 18814801 18814821 GCACATTGTCTGAATCTTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 1 1 1 76 3L 17799120 17799138 GAACTCAACCTACTGCACC 58 17798938 17799081 TTCAGGAATGTTAGCTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 frc FBgn0042641 FBtr0299820 3 1 2 60 3L 17423146 17423223 CAAGACGTCATGACATGATCG 59 17423106 17423125 GTCCATAGAGCATCCTCTCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG13731 FBgn0036717 FBtr0075237 3 1 1 89 3L 17382786 17382928 GAGATCTTCGAGTTCAACCG 58 17382716 17382734 GGATCAGGCCTAAATGCAG 58 NA Drosophila melanogaster 61 CG9669 FBgn0036667 FBtr0075339 3 1 1 91 3L 16837945 16838020 TTATGGACGTAATGCAGCG 58 16837872 16837890 GAAGAAGGTTCCGATGACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17177 FBgn0036440 FBtr0075710 1 1 1 80 3L 14692396 14692778 GATAATTCACCGGCGACAG 58 14692334 14692354 GTAGATCCAGTGAACTCACCT 59 NA Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 1 1 1 63 3L 12183344 12183413 TGGAACTGTACACGGTGAC 59 12183439 12183458 CATTTCCACATCTCGTACGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG6163 FBgn0036155 FBtr0076181 3 1 1 100 3L 11357012 11357720 ATGTGCCGACAGTTAAGCT 59 11356930 11356950 GGTGTTGAATCGATCCTTGTG 59 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 2 2 2 100 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094450 11094471 GGAACTCCAGGCAAATATAACC 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 1 4 5 92 3L 10568435 10568453 CATTCGCTAACAGCAACGA 59 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076525,FBtr0076528 3 4 5 99 3L 9083425 9083443 CCAAGGAATGCATACCACC 58 9083506 9083581 TATTGAACGGGAGCCTGAC 59 NA Drosophila melanogaster 61 CG32371 FBgn0052371 FBtr0076788 3 1 1 60 3L 7761045 7761063 GGTCAAGGGACGATACCAG 59 7761003 7761022 ATCGAAGAACTTGCGAAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32374 FBgn0052374 FBtr0076828 3 1 1 60 3L 7534213 7534231 ATCTGTGGATTCTGGTGGT 58 7534171 7534192 TTGTCTACATAGTAGCCACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sras FBgn0029121 FBtr0077083 2 1 1 102 3L 5557274 5557295 AGGCTGTTGTTATACCATACAG 58 5557356 5557435 TAGTCCAGATCGAAGTAGGAG 58 NA Drosophila melanogaster 61 Aats-leu FBgn0027085 FBtr0073348 1 1 1 83 3L 4826035 4826109 GGAATGATAATCCAGAGCTAACC 59 4826152 4826170 TGAACTGTCCTCCACTGAG 59 NA Drosophila melanogaster 61 fd64A FBgn0004895 FBtr0073192 1 1 1 94 3L 4020567 4020585 TCGAACAGGGAAACTACCG 59 4020640 4020717 ATTTGAATCCTTTCCCGATTCC 59 NA Drosophila melanogaster 61 Drs FBgn0010381 FBtr0073073 2 1 1 202 3L 3369630 3369648 CAAGTACTTGTTCGCCCTC 58 3369814 3369832 TTTAGCATCCTTCGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 2 3 3 110 3L 3168165 3168184 CACATGATCTGTCCATCGTG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG1231 FBgn0035134 FBtr0072546 3 1 1 60 3L 356919 356937 GTGCAATCTGGACCTTACC 58 356959 356979 GTGCTTCCGACCTAAATAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 1 2 2 80 3L 205419 205437 AGTGAATACGGTCAACGAG 57 203609 205378 GTGATTATTTCCTCAACCTTCC 57 NA Drosophila melanogaster 61 snoRNA:Me28S-G2596 FBgn0086026 FBtr0114302 1 1 1 60 2R 17222896 17222915 GATGAAGAAGACGATGACGA 57 17222932 17222956 CAGTATCAATATCAACCATTCCCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841b FBgn0083018 FBtr0113520 1 1 1 88 2R 17217783 17217801 CAAATGCACTCTGTGTCAC 57 17217851 17217871 TGCATGGATAAGTCACATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 3 5 5 81 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770667 AAGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 CG13577 FBgn0034998 FBtr0300366 3 1 1 60 2R 20155875 20155894 GAGGCTGATGAGTACTTCCA 58 20155834 20155856 CTGATGGTAAACAGAATCTTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0072177 2 1 2 146 2R 19951089 19952267 AAATCGAGGTGGACAGCTC 59 19952374 19952516 CCTGAAATGTTTGATGGTTCGT 59 NA Drosophila melanogaster 61 CG13545 FBgn0034828 FBtr0071972 3 1 1 162 2R 19045543 19045620 TTAGCTTTGGCCCTATTAATCC 58 19045402 19045420 GAGTAGGTGGTCACAGGAG 58 NA Drosophila melanogaster 61 Gr59c FBgn0041235 FBtr0071977 3 1 1 82 2R 18990272 18990290 GAACTATTCCGAGTGCTGG 58 18990145 18990226 TGGAAGTTCTCAAAGGCTG 57 NA Drosophila melanogaster 61 l(2)06496 FBgn0010622 FBtr0071985 3 1 1 60 2R 18949650 18949668 GCTAAAGGGCATAACGCAG 59 18949608 18949626 CTCCTCGATAAGTTCGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qkr58E-1 FBgn0022986 FBtr0071843 1 1 1 93 2R 18301782 18301925 TAAAGACGCACAGATCACG 58 18301707 18301725 GAGTGCTTTGATGTTTGGG 57 NA Drosophila melanogaster 61 CG13438 FBgn0034545 FBtr0086237 3 1 1 63 2R 16580428 16580447 CTTTACTGTCGGCCTAGAGG 59 16580550 16580568 TCTCAGTTCCCTTCCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086342 3 1 2 160 2R 15671384 15671470 CGCAAGCCAACATAGACAG 59 15671242 15671260 GACCAGAATGCACTGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7137 FBgn0034422 FBtr0086505 1 1 1 60 2R 15115734 15115753 TGAACGAGTTCTTCCTGGAG 59 15115776 15115794 GCGATATAGACAGTGCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 1 2 2 80 2R 14745200 14745219 TGAAGGAACCTTATCGGGAG 58 14744890 14745162 CGATTAGATCCTCAATAACCTCTG 58 NA Drosophila melanogaster 61 CG33724 FBgn0053724 FBtr0091722 1 1 1 73 2R 14527732 14527750 ATCCTGTGGACAGTGTCAG 59 14527852 14527871 TTTACGGCATCTATCGACTC 57 NA DesignNoJunction Drosophila melanogaster 61 GstE4 FBgn0063496 FBtr0086672 2 1 1 60 2R 14291204 14291226 TAGAGACCTTTCTCGATGATCAC 59 14291245 14291264 AAATCGGCTATGGTCAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10911 FBgn0034295 FBtr0086808 1 1 1 71 2R 13941149 13941168 CGGCCATAGATTACTTCCAG 58 13940801 13940819 CGGAGATGGTGAACATGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 3 1 1 72 2R 12760754 12760772 GATCACTTGGGATCAGTGG 57 12760808 12760895 AGAACTATCCGTCAATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Nup62 FBgn0034118 FBtr0087150 3 1 1 60 2R 12233069 12233093 GGAGATAATAGACAACTTGAACGAG 59 12233109 12233129 TATGATGGGATCAGTGGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087148 1 1 5 96 2R 12226693 12226960 CGTCCAATTTAGCTCAGGA 57 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087610,FBtr0114493 3 2 5 172 2R 9847610 9847837 GTAACACTGCTGAGCTCTC 58 9847456 9847474 ACTCTGGGTCATGTAGACC 58 NA InUTR Drosophila melanogaster 61 CG17050 FBgn0033831 FBtr0087719 3 1 1 87 2R 9277944 9278037 TGTTTCAGGCTTTGGATCG 58 9277875 9277897 GCAGAGGTATACAATTCTTCGAC 59 NA Drosophila melanogaster 61 CG33775 FBgn0053775 FBtr0091776 1 1 1 82 2R 8452229 8452248 TTTACTTGGAAGAGGTCGTG 57 8452095 8452187 CCCAATTAATCCAACAGTTCTC 57 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 1 4 4 130 2R 8228645 8228732 ATTGCATATCCGTCAAGGG 57 8228533 8228551 ATTTGTGAGGGCTATGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898,FBtr0087897 1 2 2 82 2R 8216835 8216853 ATTTGCGTGGTCTAAACGG 58 8216896 8216981 GATCTCTTCGTTCTTGATTGCA 59 NA Drosophila melanogaster 61 CG34233 FBgn0085262 FBtr0112427 1 1 1 60 2R 8170374 8170394 TTATGACTCTGCCAACATTCG 58 8171378 8171396 CGCCATCGTAAATGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 3 2 2 75 2R 8142448 8142468 TCTATCTGATGAAGGTCGAGG 58 8142504 8142579 TCAATTTCGTTCTGAATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 SmD3 FBgn0023167 FBtr0087986 1 1 1 254 2R 8056594 8056612 TATACTGCCCGACATGCTG 59 8057359 8057377 GTAGGCAGTTCCTACAGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sprt FBgn0082585 FBtr0088146 2 1 1 80 2R 7278623 7278642 AAGTGTGGTTAGTGAACCGA 59 7274558 7278582 GGATTGAGAATGGTCATGGAG 58 NA Drosophila melanogaster 61 ix FBgn0001276 FBtr0088154 3 1 1 60 2R 7247147 7247165 CATGGAGACCTTTATGCCG 58 7247105 7247123 CGTGTTCAAGTAAGTGGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mat1 FBgn0024956 FBtr0088255 1 1 1 60 2R 6626964 6626984 ACTACAATAAACGTGAGGAGG 57 6626924 6626946 TCCTCCAGATAGTCATTGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30354 FBgn0050354 FBtr0088702 1 1 1 89 2R 4564768 4564844 ATTTCGAACCTAAGGAATGGC 58 4564895 4564913 TGCGGATCAACTAACTCCT 58 NA InUTR Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 3 1 1 63 2R 4337448 4337531 CGATGTGATCATCTATTCACGA 58 4337406 4337429 CAGGTTGAGAACGATTACATAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088813 3 1 4 230 2R 4035880 4036813 TATCAGTAACAGGATCAAGAGC 57 4035671 4035689 TATTGCTAATGTGGCTGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 2 2 2 80 2R 4014617 4014635 TTCATCGATGCAGCATGGA 59 4014500 4014576 CAGACTAATGTCCTTCAAGCTG 59 NA Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 3 2 2 84 2R 3695076 3695094 ACAAATGCTACTCCTGCGA 59 3695142 3695223 GACTTCCAGCACTGAATCG 58 NA Drosophila melanogaster 61 CG30499 FBgn0050499 FBtr0088954 3 1 1 96 2R 3452740 3452816 CAACAAGATCAAGACGGCC 59 3452662 3452680 GTAGAGATTGACACCGGCA 59 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 2 3 3 87 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2751999 2752017 CATCAGACCAATACCACGC 58 NA Drosophila melanogaster 61 CG34173 FBgn0085202 FBtr0112364 1 1 1 68 2L 22054098 22054172 TTCAAGATGTTTCGCACACTG 59 22054050 22054068 ACGGACCTCATCTTTGGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262,FBtr0085931 1 2 2 60 2L 22016459 22016479 GTTGGATCTTATGGAGGAGAG 57 22016501 22016519 ATCTAGGGTTTCCTGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33866 FBgn0053866 FBtr0091870 1 1 1 60 2L 21541434 21541452 CGCTCAGGACTTTAAGACG 58 21541476 21541494 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33895 FBgn0053895 FBtr0091899 1 1 1 60 2L 21469100 21469118 CGTAATTCGTGATGCCGTG 59 21469058 21469077 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33898 FBgn0053898 FBtr0091902 1 1 1 60 2L 21462812 21462831 AGAAGAACATCACCAAGACC 57 21462771 21462789 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10337 FBgn0032805 FBtr0081276 2 1 1 100 2L 19546269 19546287 ATCAAGACATGGCAGAAGC 58 19546121 19546205 GCACAACCGATTATACCGT 58 NA Drosophila melanogaster 61 CG10195 FBgn0032787 FBtr0081286 1 1 1 80 2L 19483471 19483489 GAACGACCATGTTCTTGCC 59 19483345 19483429 GAACATAGAAGTCATCGCCAG 59 NA Drosophila melanogaster 61 CG15173 FBgn0032744 FBtr0081178 1 1 1 80 2L 19044077 19044167 TTGACAAAGAATTGGTTCGGG 59 19044017 19044036 GAAGGCCTCCTTAAAGAGGT 59 NA Drosophila melanogaster 61 CG5755 FBgn0032664 FBtr0081033 3 1 1 60 2L 18097891 18097911 TGCTGGTATATTGAATCGTCC 58 18097931 18097951 GAGGGAATCGAAATTGTAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5050 FBgn0032637 FBtr0080981 2 1 1 87 2L 17453646 17453665 ATCTCTTGTCAACTCGGTCC 59 17453714 17453892 CTCATTGTACTCCTGCAAGC 59 NA Drosophila melanogaster 61 Vm34Ca FBgn0003983 FBtr0080521 1 1 1 177 2L 13411500 13411518 ATAAGATGCTCGGCTCCTC 59 13411341 13411360 CTGAACAGGTAGTTCTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31704 FBgn0051704 FBtr0080273 1 1 1 60 2L 11840795 11840815 GTGTCCTCGAAACTATGATCC 58 11840834 11840855 ACACTGGTTACTATAGGTCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppt2 FBgn0032358 FBtr0080212 1 1 1 80 2L 11280694 11280715 CGATCAGGTTAGGGATTATCTC 58 11280756 11280836 CCTCCTTGTGAGTATCCCA 58 NA Drosophila melanogaster 61 CG16743 FBgn0032322 FBtr0080147 1 1 1 60 2L 10972848 10972872 GCTATCCTTCATATCTCTACAATCC 58 10972890 10972908 CCTCCCATTTGAGGATACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672,FBtr0290007 2 2 2 80 2L 10925503 10961099 AGTCAAATCGTTGTCTCATCTC 58 10925444 10925463 TCGTTATCAATGCTCGATGG 58 NA Drosophila melanogaster 61 ial FBgn0024227 FBtr0080180 1 1 1 80 2L 10857783 10857856 CATACGGACAGCCATACGA 59 10857721 10857739 AGACACGTCCAAATTTGCC 59 NA Drosophila melanogaster 61 CG17633 FBgn0032144 FBtr0079868 3 1 1 60 2L 9769970 9769988 TCATTGAGGGACTGAAGGG 58 9770011 9770030 TATTGGGAGTAGGCATGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zf30C FBgn0022720 FBtr0079865 2 1 1 109 2L 9761492 9761576 ACCGCTGGTATTCTCAAGAC 60 9761648 9761666 AAGTGCGACTTGTATTGCG 59 NA Drosophila melanogaster 61 CG33723 FBgn0053723 FBtr0091721 3 1 1 97 2L 9440163 9440253 CCACTCCTGTCCATATAATAACG 58 9440088 9440106 CACCTTCCGGATAAGGGAG 59 NA Drosophila melanogaster 61 CG13110 FBgn0032111 FBtr0079805 3 1 1 60 2L 9350846 9350867 TCTATCCGATCGACTATCACTC 58 9350888 9350906 TTAATGTGATCGCAGTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rost FBgn0011705 FBtr0079782 1 1 1 80 2L 8986524 8986611 GGGAACAGATGAATTTGGC 57 8986462 8986480 ACAAAGGTCACCATACAGC 57 NA Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 3 2 2 86 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935750 8935897 GATTACGCCAAAGAACTGGA 58 NA Drosophila melanogaster 61 CG32987 FBgn0052987 FBtr0079735 3 1 1 60 2L 8863953 8863972 CCTTATCGGAATTACGGTGG 58 8863995 8864013 CTGCAGGTGAATATGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cort FBgn0000351 FBtr0079320 3 1 1 80 2L 6675693 6675772 AGAAACTATCCAGTTCTGGACC 59 6675634 6675652 CTTGAAGAACAGCTTGCGG 59 NA Drosophila melanogaster 61 retm FBgn0031814 FBtr0079272 3 1 1 112 2L 6451702 6451720 CAAGTTCCTGTTCTACGGC 58 6451005 6451626 GAATCATGGTCTTGCACGG 59 NA Drosophila melanogaster 61 ifc FBgn0001941 FBtr0079179 2 1 1 94 2L 5986813 5986831 ATCTTGGGCTTCATCTGCA 59 5986889 5987630 TCATCACCTTGGTAACGGT 58 NA Drosophila melanogaster 61 CG8965 FBgn0031745 FBtr0079158 2 1 1 90 2L 5861169 5861259 CTAAGACGCCTCAAGATGC 58 5861097 5861115 AGATGGTCTTCACTCCAGC 59 NA Drosophila melanogaster 61 CG15440 FBgn0031607 FBtr0077454 1 1 1 141 2L 4454433 4454452 GATAAATGCTTGACGGCCAG 59 4454250 4454329 TCATGTAGGACTCCAGGCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG9867 FBgn0031421 FBtr0077767 3 1 1 87 2L 2382286 2382358 ATACACCCATAATCCAAGGCT 59 2382407 2382425 TTGTAGGGAATCTGCAGGC 59 NA Drosophila melanogaster 61 CG34016 FBgn0054016 FBtr0100071 3 1 1 157 2L 1099802 1099823 GGAAACAAGTGGTCAGATTGTC 59 1099940 1102162 AACAAATACACTGCGTGCTC 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 1 4 4 80 2L 872013 872035 CAATCGCCTCAAGATAAACTCAG 59 872075 872220 AGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 CG4164 FBgn0031256 FBtr0078060 2 1 1 215 2L 454089 454107 CAAGCACCTTGATGGACAC 59 454344 454363 TTGATGGAGGATTGGTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11885 FBgn0031253 FBtr0078089 2 1 1 60 2L 421314 421332 GATTCGACAGGCAGTTCTC 58 421272 421290 CAGTGGAACACTATCTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3345 FBgn0031240 FBtr0078127 2 1 1 92 2L 269378 269465 ATCGGACAGGACTTCAAGAG 59 269520 269538 TAGGTTGGAGTCGTGTAGC 58 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 2 6 6 80 2L 14976 14996 ATTATGTGCCTTATGGACCTG 57 14858 14937 CAATTACATCGTTGGATCTTCG 58 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 2 3 3 81 2L 74975 74994 ATAAGTTTCACGGTGACTGG 58 75091 75115 CTCGAGAGTCATTGTTATAAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 2 4 4 80 2L 123790 123872 TATTACGATCCTATCATTCCCG 57 123731 123750 TAGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 1 2 2 80 2L 139951 140129 ATAATGTTTCGTTACGGGCC 58 139890 139908 CACTGAATCGTACTGTGCC 58 NA Nonspecific Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 1 2 2 80 2L 1117493 1117511 TCAGCAGCCAATATGTCGA 59 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA InUTR Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 1 2 4 80 2L 2490782 2490801 ACTAAACTCGTCTCACAGGG 59 2490667 2490739 CACCGGAAGATTATGTCGC 58 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 2 4 4 81 2L 2738607 2738692 TATTGAGATATCCCGCCGA 57 2738737 2738755 GCAAGGTAATAGGTTCGCA 57 NA Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 2 2 2 83 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025880 3025900 TGAGTCGTTCTGAAGTAGAGC 59 NA Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 2 2 2 80 2L 3865420 3865503 CGCATCATCAAGAACACCA 58 3865546 3865565 CGATCGAATGGTCCTAAACC 58 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077485 2 1 2 160 2L 4187639 4187657 CTGCGCATATGATACGTGC 59 4187430 4187448 TTTGTTCAAACGCTCGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 5 5 107 2L 4468744 4468762 GGAAGACTGTCGAAGAACG 58 4468590 4468673 TACCCAGATGGCAAAGAGG 59 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 1 1 3 78 2L 4880294 4880313 ACATTTAACGACTCACACGG 58 4879138 4879156 CAGATAGTCCTTCACGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079010 1 1 2 137 2L 5055490 5055508 GACTTCAAGACCGATCTGC 58 5055699 5055717 CTTGGGCATAATGGTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 3 2 8 95 2L 5068384 5070107 AGAACATACGCACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 2 2 2 120 2L 6067222 6067293 GTACTTGAGAAGCTGGTGC 58 6067377 6067395 CAAAGCCCTGTTCCAACTG 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 3 3 3 88 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095144 6095249 GGTAGAGCGGATTCATATTTGG 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335 1 1 2 68 2L 6535870 6535888 ATGCCATACAACTACGCTG 58 6532944 6535838 ACGTTTAACCTTTGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386,FBtr0290295 1 2 3 86 2L 6768558 6768576 GTGTTTATGACCCAGCGTG 59 6768432 6768508 CATTCCCATGACACCTGGA 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 1 4 4 80 2L 7403301 7403319 CTGAGAAACAAGTGGCACC 59 7403357 7403561 GACTTTCAGAAATTAGATACCCAGG 59 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 2 4 4 80 2L 7404149 7404233 GAAGATGCCATGAGAGTGC 58 7404274 7404295 ATCCGCATAAGTTTGAATCTGG 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079514 1 1 5 81 2L 7698767 7698787 GTTATCCTGGTCAAACATCCG 59 7698076 7698727 TCGTACGAAATCGAATCTTCAG 58 NA Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 2 2 2 113 2L 7735203 7735334 AACTACGACGTCGATTTCG 58 7735108 7735126 GTAGGACAGTCCATGTCCA 58 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 3 2 3 129 2L 7805160 7805178 GTCAGGATGACACAAACGG 58 7804905 7805068 ATTCCTGTTCGCTATTGCTG 58 NA Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 1 2 2 90 2L 8372746 8372891 TATTATGGACCCACGGTGG 58 8372945 8372963 TCTTGCCCAAATCCAAGTG 58 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079678 2 1 3 138 2L 8487674 8487755 CATTTCTGTACCACGCCTC 58 8487856 8487875 CTGCTGAATGATCTTCTGGT 57 NA Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 3 2 2 92 2L 8996808 8996826 ACCTACATCAAGAGTGCCG 59 8996671 8996755 CAGTGCCATATTCTTCGATGTG 59 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 3 3 3 81 2L 10848458 10848553 CTCAGTCTGGAAACAAGAACG 59 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080576 2 1 2 97 2L 13779657 13779676 AAACAATACAACCTGCACCA 58 13776143 13777775 ATGAGGCTAGTTTGCTGAC 57 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301495 2 2 4 153 2L 14636154 14688478 GGAATGCAATAGGGCATCG 59 14611857 14611875 ATCAACCGAGTACGTCAGC 59 NA Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 3 3 3 80 2L 16665272 16665351 ACGACAAGTGGTCTCACTG 59 16665210 16665231 AACCGGACAAATATTCTTGCTC 59 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 1 1 1 82 2L 16730163 16730182 TGAAGTCCAAGAATTGGGTC 57 16730280 16730299 GTACAATCGAGGACTTTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080906 1 1 16 87 2L 16777367 16777385 GTGTGCTTGAAGGTATCCG 58 16777436 16777645 GCCAGAATCATGTAACGCA 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 3 2 10 98 2L 17402404 17402422 GGAGAAGCTGATGGTGGAG 59 17402482 17404077 GCTTCGATCAGTATTTGCTCG 59 NA Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 2 1 1 60 2L 17532019 17532040 AACTTCTTTACAGGATCAGCGA 59 17531915 17531933 AGTTCTTCGGACAACAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090 1 1 3 130 2L 18443065 18443162 GATAAATAAGCAGCCGCCA 58 18442953 18442971 TTGATTGCCTTGTCCTTGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 1 2 3 62 2L 19581865 19582014 CCAAACAATCGACATGGAGG 59 19581822 19581840 GAAAGCGTGGTGAAAGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800 3 1 2 83 2L 19643364 19644273 ATCTCACACGTAAATCCGC 58 19644319 19644338 ACAATAGAAGCTAGCAACGC 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301718 1 1 4 86 2L 19929345 19950418 GTCAACCAATGTAAGTTCACAC 58 19950465 19950483 ATTTGGCTAATGGTGGCAC 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 1 2 5 183 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339314 20339332 CATATTCGATGGGAGTGCG 58 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 3 5 5 83 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355881 GATAAGCAAATCCTCGTGCG 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 1 6 9 92 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882384 20882402 GTATGTTCTTCACGTCGCG 59 NA Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 3 2 2 80 2L 21158236 21158316 TGAATGAGATTAGGGTTCCCT 58 21158176 21158196 TGGTGGTATTTACGTAACCTG 57 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 2 5 5 90 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184210 21184286 CACGATGAACCAACTTTAACTC 58 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 2 4 4 89 2L 21255234 21255252 GAACTTCGGTCAAGTCGGA 59 21255303 21255547 CCATGATTTCCTGCAGTAGTG 59 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512 2 1 3 89 2L 21312193 21318132 GACCTGAAAGATGAAGAATGTC 57 21318181 21318200 ATTAATGTTCGGCTGAAAGC 57 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 1 3 4 97 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 1 1 1 68 2L 1789358 1789381 GAGAATATGGACAAGGATCTTGAG 58 1789255 1789273 AAATCTACGATGGCTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113,FBtr0111114 3 2 2 60 2R 487559 487582 GACTGCTATCTTATGATTCTCCAG 58 494274 494295 AAATTACGTAAAGCACCACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 1 5 5 80 2R 580803 580821 CAAGGTTTGGTTCACCCTG 59 580662 580760 TCGATGAGCAGACTCTATCC 58 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 1 2 4 82 2R 1334202 1334226 CTACTAAGGATACAATTGCAGTACC 59 1334266 1334346 GAATAGCCAGAAGCCAGGA 59 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 2 3 4 96 2R 1414859 1414877 GACATCCTAATGGCTACGC 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 2 3 3 83 2R 1864960 1865499 CCTGCATGTTATTCTTATGTCG 57 1864898 1864916 GGTACTTCCAATACGGGAC 57 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 1 4 4 82 2R 1925630 1925649 AGATGGGCTTCAAACTCTCC 59 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 3 4 4 79 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515389 2515407 GGTACCAGACTTAGCAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 1 2 2 60 2R 2555723 2555744 TCGGACAAATCAAAGGAATCAC 59 2555817 2555835 TGTACAGATGACAGGGTCG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 1 2 2 96 2R 2561686 2561774 ATTCGCAGTGACGAGTCTC 59 2561834 2561852 ATAGGCAAAGGCGTAGTCC 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 2 5 11 142 2R 2764834 2764852 ATGTTCTCCGATCAGGCTG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 3 5 11 143 2R 2764835 2764853 GATGTTCTCCGATCAGGCT 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 1 3 3 80 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922201 TAGAATCTTATGCGGTCGC 57 NA Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 3 1 1 71 2R 2923895 2923913 GTTGCTTGTCATCGGAGAG 58 2924005 2924023 CTTTGGTTCTTTACGCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 pk FBgn0003090 FBtr0089044 2 1 3 114 2R 3081432 3081450 TGAAGCCGTTTAAGGATGC 58 3081527 3096493 CTGATGGGCTCATTTGACTC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111049 1 1 59 90 2R 3243942 3249237 GATTGGTCATCACAGAGCC 58 3243870 3243888 GAGCTATTGGATTTGGCCA 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 3 3 59 86 2R 3247004 3247023 AAGCACCTTAAGGGAAAGAG 57 3236471 3246958 CTTGTACCATCTAAAGAAAGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 1 2 59 80 2R 3225659 3235366 GTGCAAGTCATGGTTCCAC 59 3225597 3225615 GACCGAAACAGAGTCCTCC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 2 2 59 96 2R 3236476 3245111 CAATGCCGTTCTTTAGATGGT 59 3236400 3236418 AGAGTACCAGAGACCTGCT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 3 3 59 83 2R 3247002 3247020 CACCTTAAGGGAAAGAGCA 57 3236471 3246958 CTTGTACCATCTAAAGAAAGGC 57 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 2 8 8 138 2R 3287483 3287504 GCCTCATACAGTTTATAAGGGA 57 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 1 2 2 80 2R 3331901 3331920 ACTGTGAGGAGAAGATTCCG 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 3 2 2 80 2R 3331901 3331920 ACTGTGAGGAGAAGATTCCG 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 1 1 1 95 2R 3379451 3379469 CAGGATGTGAATTTGCCAG 57 3379310 3379328 ATTGGACAGGTTATTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 3 2 2 80 2R 3383083 3383102 ATTTGCTGGACCTGTATCCA 59 3382958 3383041 GTGGAGTGAATCTTTCCGTC 58 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0088830 2 1 2 111 2R 3677996 3678074 CTTGAGGGAATTATCCTACGC 58 3678147 3678165 AGTTGCATTGGGAGTATGG 57 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112579 2 1 4 80 2R 3733371 3734275 ATCGGCAAATACTTTCTCCA 57 3733310 3733329 AATTAGCTCGGAGTATTCGC 58 NA Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 2 2 2 181 2R 4020284 4020455 GCGTCAAATAAAGGTAATGTCG 58 4020662 4020680 AAGGAGCGTAGTAATTGGC 57 NA Drosophila melanogaster 61 sns FBgn0024189 FBtr0088635 3 1 2 85 2R 4720301 4720319 TGTTCTCGGTGATGTCCTG 59 4720366 4722467 CAGTTCAAGTCCTTTGGTCTC 58 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 2 3 3 92 2R 4799447 4799529 AGAAGAATGCTCCTGTTATCC 57 4799375 4799393 ACTGATCGTAGGGAAGGAG 57 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 3 3 3 107 2R 5021179 5021197 CTCGATGTACGCCTACCTG 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 2 1 1 110 2R 5287500 5287518 CGTTCTGGGCGTATTTCTG 59 5287329 5287348 TCTGTTAGCGGAAACATCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 3 3 3 84 2R 5323911 5323932 CATTTCAAACAAATTGGCCTCG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 3 1 1 96 2R 5708156 5708176 GCATATGCCTGTATTTCAGTG 57 5708292 5708310 TCGGTGTTTAGATCAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 2 3 3 81 2R 6019888 6019909 CCAGAGCTACGAAATAAAGCTG 59 6019949 6020269 GATCTTGATCACGCTCTTCAG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301965 3 1 17 81 2R 6187704 6187722 GGCAATCAGAAGTCCAAGG 58 6187764 6192113 GATTGGGAGACTCTTTAAAGGT 57 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349 1 1 2 138 2R 6206586 6206604 AAACTGTCACATCAACGCC 59 6206703 6206784 GATATCGGGTCTAATTGCACAG 59 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 1 2 3 80 2R 6343081 6343099 CTTATTCGGAAGTACCGGG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 1 2 4 83 2R 6358246 6358955 GTATCGGACGGATATGACGA 59 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 1 2 26 115 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408770 6419549 TCGTACTTCAGGTCTTGGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 3 4 4 109 2R 6730659 6730677 GAACGTCATCGTCTTTCCC 58 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0114570,FBtr0088196 3 3 3 61 2R 7117374 7117455 CTGGGATCCTGCTCTTTCC 59 7117331 7117352 CATTGGATAGATTCTCCGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 2 2 2 83 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512588 8512785 GTTCTCCGTATCTGTAGCAC 57 NA Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 1 2 2 87 2R 8529479 8529553 TTTCGCCAAGCAATTTGTG 58 8529410 8529431 GAAGGATGTCGCAATAAATACG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 2 3 6 80 2R 8766205 8766566 CAATACCAAGATCCCAACCAG 58 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 3 2 2 91 2R 8811821 8811839 ACATGCAAGACCATCTGGA 59 8811964 8811982 CCGAAATAGACGTTGACCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 2 5 12 80 2R 9310225 9326126 GTCTCCTGAATACCTATGACG 57 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 2 5 5 150 2R 9426600 9426618 AGTCAGCCGTCTTAGAGGA 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100452 1 2 3 142 2R 9842149 9842439 GGGAATTCCTCTTCCTGCT 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087605 2 1 4 110 2R 9876011 9876032 GAAGCAAGTCATAACAGATGTG 57 9874961 9875881 ATTGAGTATCCATCACCCGT 58 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523 2 1 2 80 2R 10056598 10056899 AACTCGGTCAGGCTAAGTG 59 10056940 10056961 ATAGAAGGATATGGAGCCATCC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 3 3 8 81 2R 10064189 10065380 CAAGAACTGTGACATACTTCCTG 59 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 3 4 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184215 TATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 2 2 2 80 2R 10557359 10557377 GCAGTTTCAATACTGGCGT 58 10557421 10557498 CGTAATACCACCAAGGACG 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 2 2 6 80 2R 10834799 10835160 TGGATTGGGAATTGATAGCTC 57 10834739 10834758 TTGTCACATAGGGATCTCCC 58 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 1 3 3 97 2R 10860180 10860198 TAAGAATCCGCATCATCGG 57 10860259 10864760 ATTCCTCTATGGATCCCGG 58 NA Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 1 2 2 80 2R 11035856 11035926 ATAGATATAGGCTGCGGCTC 59 11035969 11035987 TTCCAAAGCCAACATGTGC 59 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087402 3 1 2 82 2R 11098560 11099089 CAAGAAACCTATCAACGATGCT 59 11098499 11098521 CAGATGATGCTATATCACGATCC 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 3 5 7 95 2R 11551928 11552826 TGGAATTTGCTCCATAGACGA 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 3 2 5 80 2R 11773649 11773671 CTAACTGACAATCAGATCCACAC 59 11773149 11773609 GTTGTTTAGGCGTAGTCGC 59 NA Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 1 2 2 80 2R 12229398 12229418 CAGCTCCTCTAATTATGTCCA 57 12229277 12229356 CAATAACCGCACGATTCTG 57 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 1 3 5 80 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 1 3 6 197 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678299 12678317 TCGGATCAAGTTCCAGGTG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 1 7 9 87 2R 12959347 12959484 AATCTGAAGACCAAGAGATCCC 59 12959281 12959299 TGGGTGTTGTCATCTCACC 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 3 2 4 87 2R 13619770 13619836 CGAACTATTGGTCGCTTGG 59 13619886 13619905 CAAGCTCATCACGAACAGTG 59 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 3 2 4 132 2R 13755953 13755972 CTTCAAGATGTTGCCATCGT 59 13755051 13755796 ATCTTCGTCGGAAACTCCC 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 1 2 2 86 2R 14182694 14182768 GAAACGATGGTTGAGGCAC 59 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 2 3 4 88 2R 14524313 14524400 GGAAACTGCTGAAACTTCTACC 59 14524246 14524266 TTTCATCGTTTGCCTGTTCTG 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 1 2 3 196 2R 14892379 14893302 TAGCATCAAGGTACAGCGG 59 14893462 14893480 GTTCTTCAAGTACCGTGCC 58 NA Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 3 2 2 83 2R 14996379 14996397 AGGATCCAGACTATCTGCA 57 14996444 14996531 AACAGGTGGCAAATACCTG 58 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 1 3 3 80 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010727 15010809 TGGCCACTAATTCAAAGTACG 58 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 1 4 5 94 2R 15024321 15024463 TCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 1 8 12 80 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064237 15064455 AAATGACGTTAGTTCCATGGAG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 3 7 10 81 2R 15296039 15296060 GAGGATAGAAGATCCACTCCAG 59 15295915 15296001 GTCCTTAATTAGTTGCTGGACAC 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 2 7 10 80 2R 15296095 15297142 CCCAAGAAGATTACAAAGTGGG 59 15296036 15296058 AAACTGGAGTGGATCTTCTATCC 59 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536,FBtr0086539 2 2 4 193 2R 15338964 15338982 GTTCACATCCAAGCTGGTC 58 15336054 15336072 GAAGATCTGGCCGAAAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 2 2 2 80 2R 16193969 16193988 TTCGGTATCAGTACCTGGGA 59 16193845 16193930 GTTTATAAAGTGCCACTCGATCC 59 NA Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245 2 1 2 83 2R 16552567 16554438 CACCTGGTGAATACAAATTTCG 58 16552505 16552524 TTTCACATTGCCCATCATCG 59 NA Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 1 2 2 102 2R 17012643 17012661 CCTGGCGAATCTCATAGCT 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 2 3 3 115 2R 17068988 17069007 AAATGTTCTCCATGTGCGAG 59 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 2 6 6 80 2R 17299910 17367603 AAGATCAGAAATCGGTGAAACC 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 1 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 2 3 3 80 2R 18113468 18113488 CTATACTACACGTTGGGAGTG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 1 1 1 96 2R 18545711 18545729 TACTGACCACCGTGAAGTC 59 18546436 18546454 TAAGGTAGGCATACGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 1 8 8 101 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 3 2 2 82 2R 18706462 18706936 GGACAACGAAGATTTCTCGG 59 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 1 2 2 80 2R 18798377 18798395 CGATCGACCTGTACTGGAC 59 18798438 18798513 TGATAAGACTGGGCTGTGAC 59 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 2 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301259 3 1 4 106 2R 19487469 19487580 CCTATCAAACGGATACAATGCT 58 19487384 19487402 CTCAGAACACGGAACTCAC 58 NA InUTR Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 2 3 3 80 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619489 19619573 CATCGTTGTACAATCCGTCC 59 NA Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 3 2 2 81 2R 19908217 19908295 GAAATATCTCTGCACAAGACGA 58 19908157 19908176 TACTTATTGTGGCCACATGG 58 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 3 2 6 102 2R 20819470 20819490 CCATGTACATTGAGTCGTGTG 59 20819315 20819409 ATGTACATTAGCTTCAGCTGGA 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 2 4 4 96 3L 177449 177469 CGAGAACAATGGCATTATCCA 58 177320 177392 GAACGGTTGTGCTAAGATGG 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 2 4 4 80 3L 345202 345223 CTACGTCTATTCGAATTGCACC 59 345085 345162 GCGAAGAGATCATCACAACC 59 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 3 2 2 81 3L 571003 571086 CGATTTCCACACTGTGCAG 59 571129 571149 GATCGTGAACGTCATGTTCTC 59 NA Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 1 2 2 159 3L 838474 838492 AAACTTGATCTGCACCCAG 58 838614 839258 CTTGTTGAGCTCGATGAGAG 58 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 2 2 3 103 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1269142 1269160 CGAGGTAGTAGCGCTTCTC 59 NA Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 2 1 2 87 3L 1330923 1330941 CTAAAGGTTGTCTCCGCCT 59 1331307 1331325 AGGAATCCAGTCCCAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 3 2 4 116 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346346 1346364 ATTCACATCCCGATAGCGA 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 2 5 5 99 3L 1635217 1635235 GATGATCATCATGGGCGTG 58 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 2 2 2 80 3L 1644054 1644073 GCGCTTCTGGATACTTACAG 58 1643937 1644014 AGTTTAAAGACCACCATACCTC 57 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 1 2 5 85 3L 1656737 1656755 TGAAGTCTGGTATAGCGGC 59 1655701 1656688 GACTAGAGGTTCGCTACCC 59 NA Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 2 2 2 136 3L 1821294 1821312 CAACACAGGACCCATAGCA 59 1821411 1821817 GCAACACGTAGACATAGGGA 59 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 3 2 2 113 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965413 1965432 AGATATTGACGCACCAACTC 58 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127,FBtr0072886 3 2 2 60 3L 2299244 2299264 CCTTCTTTCTGCAATGTTACC 57 2299773 2299793 TTAATAAGCGCCAAGATGTCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 4 5 117 3L 2604269 2607702 TAACCATCAGAAACAACGTGG 58 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988,FBtr0072987 3 2 4 106 3L 3052765 3052783 CTTTCATACTCGCCCTGGA 59 3052853 3052948 GTTCAGTAGCTCCACAGCA 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 3 5 5 82 3L 3312394 3312525 CCATATTAGGTGCCGTAACC 58 3312570 3312588 AGTGGATACCCTCGTTGTG 59 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 3 3 3 170 3L 3328026 3328045 AGCTGACGGATCTAAAGGAG 59 3328178 3328263 CATTCACATCGACCTTGGC 59 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 2 2 2 80 3L 3812401 3812479 TTGTGCTCATTGGTTTACTCG 59 3812520 3812539 ACGGAGTCACTATCAACTGG 59 NA Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 1 2 2 80 3L 4035082 4035168 ATCCTAAAGAGTATGCAGGCC 59 4035210 4035228 GCGACCAAGTAGGTAGACC 59 NA Nonspecific Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 1 2 2 80 3L 4241696 4241914 AGGAAACGTACTCCATGCT 58 4241957 4241976 GGGTTACCAGTTTCTTGCAG 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 3 4 6 239 3L 4418264 4418283 CAGGCGATGTAATTGAGGTC 58 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 2 2 5 181 3L 5160148 5161353 AAATGTAAAGGTTACGGCTTCG 59 5156996 5157014 AGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 3 2 2 80 3L 5429399 5429627 GAGAACTCCTATCGTGCCC 59 5429670 5429689 CGAGATGCATCGATAGTTGC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 3 3 10 82 3L 5535644 5535664 TAATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112714,FBtr0112709 3 4 8 200 3L 5724550 5724568 CAAGGATTTGTACTCGCCG 59 5724732 5727579 GATTTCCGCGTTTCTTGCT 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 1 2 6 133 3L 5763026 5764728 TGGACATGACAATAACGGC 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0110885 2 1 2 97 3L 7729959 7731443 CACATGAATTCTGTGCTGCA 59 7729881 7729899 GGATCGTTGAAGACAGCCT 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0076768,FBtr0300413 2 3 4 86 3L 7921071 7921089 CTGACCTTCACCAACAAGC 59 7919924 7921023 CATGTCGTTATCGTTTATGCG 58 NA Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 1 2 2 97 3L 8048535 8048991 CATTGAACTTGTTGAGAGCCC 59 8048458 8048476 CCGAGGAGCTAATGGAGTG 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 3 5 5 125 3L 8097908 8097988 GTCTTCTCAAGGTGCATCTG 58 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 3 1 1 62 3L 8322376 8322394 CTATTTCGTGCATGAGCCA 58 8322465 8322489 GGATCATTAATCTCATAGCCAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076673 3 1 9 251 3L 8351812 8353443 CACCTGATTCTCCAGTCGT 59 8350929 8350947 ATGGAGTCCCAAATGATGC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 3 1 1 95 3L 8409711 8409732 CGCCAAGACTTATAACAATGAG 57 8409576 8409594 GAATTGAGATCCGTGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 3 2 2 83 3L 8966610 8966630 CCTCGTATTTGGATGTTAAGC 57 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076528 1 3 5 80 3L 9080821 9080842 CTCTAGTTATGATCGCACTGAC 58 9080880 9080961 GATTGACGGTTGTCATTAGAGG 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 1 2 4 97 3L 9346898 9346919 ATTGGACTGGAACAAGATTCAG 58 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0100386,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 8 8 117 3L 9825858 9825877 AGATTTGAAATGGCCACCAC 59 9825956 9826036 TGTGTAGTCCCGGTTAACTC 59 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 1 3 3 80 3L 10214542 10214561 GCATCAATTTCCCACTGGAC 59 10214220 10214501 AGAACATGGCATCTATGAGGA 58 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076289 2 1 5 192 3L 10580767 10580787 GATCCAAATCTACGCTTCCAG 58 10582609 10583230 AGGTTTCTACACCAGCCAC 59 NA Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 2 2 2 96 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626525 10626544 GATAAGCACATTAGCCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 2 4 4 115 3L 10865273 10865291 ATCAGCACAGTCCAGTTCC 59 10865369 10865455 CATTTCTTCGCTGTTGTCCA 59 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076205 1 1 3 80 3L 11065496 11065665 AGAAACAGCATGCAGATGC 59 11065706 11065727 TTGAAGTATGATATGCGTGGTG 59 NA Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 2 2 2 139 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087227 11087300 GCAAAGTGTTCAACCTCCT 58 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161 2 1 2 105 3L 11094310 11094384 CATGAAATCCGGATAGCGG 58 11094223 11094241 TCAGCTGGTTCCATTTGTG 58 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 3 3 5 128 3L 11219782 11219802 TACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139 3 1 2 81 3L 11614363 11614381 CTGACACCTGAGGAAATCG 58 11613752 11614318 GGTGACCGTATTGGTTGAG 58 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076138 1 1 2 80 3L 11617286 11617370 ATTTATGTGGTGTCAGAAGGAG 58 11617227 11617246 AGCCCAATTACTGGAATCTC 57 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0302137 2 1 3 67 3L 11815332 11815350 GGCTTTGTTTGTAGCCGAG 59 11815151 11815171 GAGAGTTTCTCTTTGCCTCTC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 3 2 3 87 3L 12493366 12493387 CTACACTGATTCCAAGCTACTG 58 12493241 12493324 GCCAATATCGATCAAGTATCTTAGG 59 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 1 3 3 88 3L 12788111 12788129 TTACAAATCCGCCCATCGT 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934 2 1 3 122 3L 12844714 12844732 AATGGCTATCCAGGTGGAC 59 12844816 12845357 GGTACAGTAGTTTGTTCCAGG 58 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302488 1 1 2 80 3L 13455062 13455080 GTGGGAACCTTCATTCACC 58 13455205 13455320 GCTGAACAGTTTGAGATTCTG 57 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 1 3 5 80 3L 13474165 13474183 CATGGACAACATGTTCCCG 59 13474227 13474323 AAACCAAAGTGTGAGTCGC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 1 2 6 80 3L 14219486 14223279 GATAATCTCAATGAGCAACTGG 57 14223318 14223338 CCGATCCTCAGCTATATTCTG 57 NA Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 3 3 3 81 3L 14981279 14981297 ACAATCCCTCATCGTTTGG 57 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 2 2 6 142 3L 16108919 16110653 CAGAGTCCATCGTCTATGACC 59 16110757 16110775 GTAATCTGCGGCAGTTGTG 59 NA Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 3 2 2 86 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913033 18913111 TACGATCTTGCGCTTATCCA 59 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 2 2 3 82 3L 19488009 19489659 CTGCATGTGGTATTCCGAC 58 19487945 19487969 GGATAGTAGGTCTCATTTACATAGG 58 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 1 4 4 80 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 1 3 6 80 3L 19685466 19686092 AGGTGTACAGATGTACCAAGTC 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 3 3 3 93 3L 19790274 19790292 GTACGATCTGAGCGACTCC 59 19790346 19790436 TCGATATTGCTTAATGACGTGG 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301604,FBtr0301606,FBtr0301607 2 4 5 111 3L 19794614 19794632 CATTTGGAGATCTCTGCGA 57 19794704 19794782 CAAGATGTTAGGTTGATCTTGG 57 NA InUTR Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 1 2 3 110 3L 19881568 19881648 TGAAGCCGAATAACGACGA 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038 3 1 4 145 3L 21061267 21061820 AATTGGCGAAAGCTTTCCC 59 21061926 21061947 GATTCTGCAGGTAAACATAGCC 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0273212,FBtr0273213 3 2 4 145 3L 21207345 21207367 GCAAATCCTACAAATAGTCCAGG 59 21207472 21208486 AGTGCTGACGATGTCTGTC 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 3 3 3 63 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265936 21265954 CCAGTACCGATCGTTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 2 3 3 80 3L 21414616 21417562 TACATCAAGGTGGAGAGTGTC 59 21414556 21414574 CTGGACACGAATCTTGTGG 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 2 2 3 80 3L 21565366 21565387 TATATGCTGCAACATGAGACTC 58 21565428 21565502 TTGGAAGTCTCTGGTTGCT 58 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 1 2 2 112 3L 21675715 21675790 TACAAGAAGCTCGTTCAGCA 59 21675863 21675883 CCTAATTGGCACAAATTCGGT 59 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 3 3 3 80 3L 21830924 21830942 GACCATGAAACTGGTGCAC 59 21830809 21830881 CACTTGACGAAATCCTCGTC 59 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 1 1 1 69 3L 22279933 22279951 GCTCCTCAGGCATAATGAC 58 22279817 22279838 GTCTACAAGATCTTCATTGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 2 1 1 71 3L 22639475 22639496 TGTCTCCATCATATTTGTCCAC 58 22639614 22639632 TACGTCGGACTGAAATTGG 57 NA DesignNoJunction Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 2 5 5 85 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776575 22776594 GGTGCTCGTTCATTTGATCC 59 NA Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 3 1 1 60 3L 20446593 20446616 GGAGACACTTAGAAATATTCTGGG 58 20447018 20447038 TTAGATTGTATCCCAGGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0100617 3 1 4 111 3R 151198 151425 CAACGTATAATTGCCCTTGAG 57 151498 151516 ATGATAGCGTTATGTCCGC 57 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078942 3 1 4 119 3R 272156 272175 TTGTATTTAGCGCATGGCTG 59 270275 271896 CATGAACCATTCTCCGGGA 59 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 1 2 3 80 3R 464125 464277 GTAAGCCTACAGGCAAACC 58 464063 464084 TGGTGGACATATACTGATCCAG 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 3 3 3 80 3R 1092685 1092703 AGGCGATAAGATCAAGTGG 57 1092745 1092853 ACAGAGTCAATCTGATTGGTC 57 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 3 3 3 80 3R 1536524 1536545 ATCACCTAGAAATGCTTAACCG 58 1536583 1536671 CAATCGAAGATTGAGCAAACTG 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 3 4 4 134 3R 1643901 1643980 GTCAACATGGACACAACGA 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 2 1 1 77 3R 2125196 2125214 GTGGAGTCACCTTCCAGAG 59 2125721 2125739 CATAGACATCCTGCTCGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 1 2 2 80 3R 2283141 2283223 TCATACAGCAATCTGAACGAC 58 2283265 2283283 GTAGGCCATGTTGAGTTCG 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 1 7 11 118 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734452 2734604 CTGATGGACCTCTGTCACG 59 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 1 3 3 82 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723621 3723639 TACTGGGCTTCGATCATGG 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 1 3 3 80 3R 4068558 4068650 CAATAGCCGAGATCAAACACTG 59 4068499 4068520 CTTGACGATGCAAGAGAATCTG 59 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 2 1 1 70 3R 4116238 4116257 CTCTGGGAGTACTTGCTCTG 59 4116125 4116145 CATCTTTGTTTCATAGCCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 3 2 2 132 3R 4445732 4446035 TACTCCAAGAATCACGCCT 58 4446131 4446149 CGGTCAGGCAATATGTCAG 58 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 1 3 3 98 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564347 4564366 GTATCCAACTTGAGAACGGG 58 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133 3 1 2 178 3R 5081299 5081320 TGGTTTCGGCAGATATCTAGAG 59 5081523 5081597 GAATGTCCTTGGAGTCGCT 59 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082055 3 1 2 182 3R 5158554 5158573 AAGTCCGTCCATGAAGACTG 59 5158334 5158409 ATCCAGAATTCCAGCTGCT 59 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026 2 1 2 81 3R 5191411 5191485 CTCCTTGTCCGAAATCCAC 58 5191525 5191548 CTGCCTGTATATTGTAGGAAATCC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 1 5 9 80 3R 5834567 5835034 TCTACGAAGGTTCAAACCG 57 5834505 5834523 GTCGGTGGATATCTCAGTG 57 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 3 5 9 80 3R 5835091 5835469 AACAAAGAGTCGTGCATCG 58 5835029 5835047 CGTAGATCGTACCCAGGTG 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 3 2 8 96 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359647 6359667 AAGACTGAGGAATACAATCGC 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 2 2 6 120 3R 7628395 7636087 TGATGTATGGTCGCTATACCA 58 7628047 7628314 CCCAGCAGTTCCTTATTCCT 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 2 2 6 120 3R 7628395 7636087 TGATGTATGGTCGCTATACCA 58 7628047 7628314 CCCAGCAGTTCCTTATTCCT 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 2 3 15 193 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814461 7814480 GATTGCTGGAAGAAGATGGC 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 3 3 15 194 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814460 7814479 CGATTGCTGGAAGAAGATGG 59 NA Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 3 2 2 96 3R 8236067 8236188 ATTGTCGCAAGTGTGATCG 58 8236248 8236266 TATGTGAAGTACGCGTGGT 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 2 5 5 74 3R 8270797 8270816 CTACCTCATGGTCACCTCTG 59 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 1 3 3 91 3R 8825930 8826123 TGCTGACATACATTCTGGAC 57 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744 3 2 3 80 3R 9135611 9135630 CGCTTGTAGATCGGATTACG 58 9135671 9135881 TGGAAATGATTGATCTGGAGC 58 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082773 3 2 3 93 3R 9158532 9159623 ATTTAGCACATGCTTCCACTC 59 9158459 9158477 TGTTTACCTGGCATCCTGG 59 NA InUTR Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 136 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210484 9210502 TTAACTCGATGTGCACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082856 1 1 4 86 3R 9462244 9468035 ATGACTACGGTTATGGCGG 59 9462176 9462194 TTTAGTAGGGCTGATGCCG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 2 5 5 136 3R 9476211 9476540 ACAAGGGTGACTTTGAGCA 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283,FBtr0301351 2 2 2 191 3R 10030136 10030430 TGGCATCTTCCTATCGGTG 59 10017581 10029983 ATCCAATATCCCAGCAAATCG 58 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 1 2 3 80 3R 10225507 10233891 GATCGCTATTTAGCAGAAATCG 57 10225448 10225466 CATCTGTGCATATTGCGGA 58 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 3 2 2 95 3R 11865261 11865347 GGAGCATGATCTCAAACCC 58 11865406 11865424 AAGGTGCTACTACTGCTGG 59 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476 2 1 2 115 3R 11995750 11995824 TTACCTCTTAACAAGATCGAGGG 59 11995899 11995917 TCTGTCTTCTGACGCACAG 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347,FBtr0083349 2 2 6 84 3R 12558424 12558442 GTGTCCTGAAGATCCGACC 59 12484785 12536293 ACCATTTGTACCTAGCCAGTC 59 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 2 3 3 81 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894758 AATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 1 2 5 140 3R 12920462 12923769 ACACATCAAGCTGAAGTCAG 58 12920341 12920361 TTCTCCGTTGTATTTGACCAC 58 NA Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 3 2 2 81 3R 13837363 13837384 TGTTGTTAACTCACTACAGCAC 59 13837424 13837826 CTGCTGTTGGTCTCTAAAGAG 58 NA Nonspecific Drosophila melanogaster 61 Muc91C FBgn0038642 FBtr0083687 3 1 1 60 3R 14518346 14518364 GGTGGCTTTGTCTTTAGGT 57 14518081 14518099 AATGCGAACTACACTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 2 4 4 96 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981434 14981452 GTCAAGCACCTTGTTCACG 59 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 3 2 2 87 3R 15477479 15477499 GGCTATTCAGTAGCATTAGCA 58 15477548 15477678 ATTCCTGTCCTATAGCGCA 58 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256 3 1 2 100 3R 15705941 15705960 CCTATCACTACGGCGTTAGG 59 15706023 15706613 ACACGAGAGCTTGAGACTG 59 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 3 2 2 104 3R 15725672 15725690 AGGTGGACCTTACGTTCAC 59 15725521 15725607 GCAGTTGTTCCATTATAGAGCG 59 NA Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 2 2 2 80 3R 16114816 16114835 ATATACGGATGTGTTGCACC 58 16114878 16114964 GCATCCAGCGTAATATCCG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 1 5 8 142 3R 16146164 16147206 AACGATCACGATTTGGACG 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 2 5 5 117 3R 16396361 16396821 GATGTCGACAGGTAAATCCTC 58 16396900 16396918 GACTCCACGCTGTTAATGC 59 NA InUTR Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 3 3 3 113 3R 16526402 16526420 AAGTTGAGGAGTGTGACGA 58 16526045 16526328 TATCCAAACCTTGAAGACTTCC 58 NA Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 1 1 1 94 3R 16569362 16569382 CAGATGCTCAATATGCAAAGC 58 16569231 16569249 CGAATCTTGCCCTCAAACC 59 NA DesignNoJunction Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 1 4 9 111 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 2 3 4 174 3R 16881620 16881700 GTTTGTTAATGGACTGGGCA 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 3 2 2 80 3R 16965293 16965423 TATTTACAGGTGAGGCCAAGG 59 16965463 16965483 CAGCTATCAGCGATAAATGGG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 1 5 5 80 3R 17349341 17349361 GTGTCATAGGCAATGAATGCT 59 17349403 17349484 GTCTCTTGTAGCGTGTTCC 58 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263 3 1 3 98 3R 17693193 17693212 ATGACCTCTCCAAACAGACC 59 17693036 17693132 TAGTCTCTGGTCCCTGGTC 59 NA Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 1 1 1 64 3R 17694776 17694794 CCAATCCCGATATGGAGGA 58 17694674 17694694 CATTTCCACTTGATCCTTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 1 2 3 80 3R 17957953 17958383 TGCCTGACCAATCTATTTGAG 58 17958425 17958443 GGTTATCTCACGCAGATCC 57 NA Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 1 2 2 80 3R 18113613 18113631 CGCGTAGAGGTCTTATCGT 59 18113675 18115212 GATCATGAGATCTGGCGTG 58 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 3 4 4 148 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446567 18446654 GAGTAGTTCATCTTGGTGCTC 58 NA Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 1 2 2 120 3R 18955125 18958733 GTCAAGTCAGATTCGTCGA 57 18955023 18955042 AAACACGATCTCCGATAGAG 57 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 3 4 4 82 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 3 3 5 139 3R 19838947 19839031 AGAGATGGCAATAGACTGGT 58 19838827 19838846 TCGATGATCATGTCCATCGA 58 NA Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 3 2 2 144 3R 19864976 19865327 AGAACGAAGGTCACAAAGAG 57 19865434 19865452 TTTGTCTGCATCTTGTCGT 57 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084591 2 1 4 85 3R 19869976 19869994 ATGCAGACGCAATACATGC 59 19869858 19869927 TGTATGCAAGGGACTCCTC 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 1 4 4 99 3R 19870978 19871168 GAAATCAAGGTCAACTGGGC 59 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 1 4 4 116 3R 20048096 20048116 TCCTGAGAAAGTATCTAGCCG 58 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 2 4 4 117 3R 20048095 20048116 TTCCTGAGAAAGTATCTAGCCG 59 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 2 3 18 81 3R 20521109 20521127 ACGCTGATCAAGAAATGCA 58 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 3 2 2 61 3R 20683123 20683144 AATGTAAAGTGCGGTGAAAGAC 59 20683023 20683103 CATGTAATGGCATTGCATGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 3 3 3 80 3R 20699677 20699837 CGGATGCTAAATACGTATGGG 58 20699617 20699637 AGTTGTCCAGTGGAATAAGGA 58 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 1 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 3 5 6 88 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180028 21181956 GTGATTTGTGCCATATAGCGA 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 3 4 4 80 3R 21448136 21448154 CGATCAATATTCAGCCGGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384,FBtr0113388,FBtr0113385,FBtr0084927 3 5 7 143 3R 21548246 21548265 CAACTACTGCGATGAGAAGC 59 21539668 21548140 TGGCTGCAAGTTGATTCTG 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 2 2 7 115 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535132 21535150 TCTTCTCATCCGATCCGTC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 2 3 7 81 3R 21577832 21577853 TTGGTGTTTACTCTTCGTTAGC 59 21575101 21577792 GCAAGTGGCCTCATTTATAGC 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 2 3 5 90 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711698 AAGAACATGATGAGCAGTGAG 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 3 5 5 125 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 2 3 3 82 3R 23758111 23758191 CTGCATCTATGCCGAAAGC 59 23758237 23758255 AAACCTCGATCACAGACCA 58 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 2 3 3 80 3R 23765355 23765434 CCATTACCTTCGAAGGTACTG 58 23765474 23765494 CCTCGATGGAAAGAATTTGGA 58 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085354 2 1 3 108 3R 24652885 24653014 AACTGAAGACACTCAACACC 58 24652796 24652815 CTATCCTTGACGAAGCACAC 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 1 4 13 134 3R 24714131 24714149 CTAACGCAACTCTTGAGCG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 1 2 4 89 3R 24941220 24941300 CAAGAAGGGTATTGAGGCTG 58 24941352 24941370 TGGGTCTTTCGTACAGAGG 58 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 1 2 2 115 3R 25323847 25323865 TTTATACAGCGCCAGGGTC 59 25323943 25324030 ACAATGATCTTGCAGTTGCC 59 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 3 3 3 77 3R 26214988 26215009 CCAAGGATGATGAATATTGCCA 59 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085681 2 1 3 91 3R 26345393 26345411 GAGCTACAAACAGTGGCTG 58 26344286 26345340 AGTGCATGGACTCTTTATCCA 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 3 5 5 82 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427004 27427022 GCTCGTACCACATCTTCAG 58 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085841 3 1 4 137 3R 27574765 27574939 GGAATATCAGAAACGCACTCC 59 27575038 27575056 GTTCCTCGAGTGCTAGACC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 2 4 8 80 4 162686 162706 AATATCCTCTACGCCATTAGC 57 162747 162838 AGATGAACCCAACAAGTCAC 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 3 6 6 80 4 369759 369846 TATCACAGGTGCTAATCATCCA 59 369700 369719 TACACCATAGCCACTGATCC 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236 2 1 4 104 4 725813 725831 CAACTGCTATAGGCACCGT 59 725897 731560 GATTTACTCCACTGTGACCCT 59 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100396 3 1 4 98 4 725810 725828 CTCCAACTGCTATAGGCAC 57 725890 728126 TCACATTGTCCTTGTGAGC 58 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 3 2 2 81 4 822725 823031 AAAGTCATGGGAGAGTGTGG 59 822663 822684 TTTACTGAGTCACGACTCACTC 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 2 6 7 81 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080447 1081041 GTCTGCTTGATGGAACCTG 58 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0114112 3 1 4 84 U 1352559 1352577 CGTGGTACGACGTATTGGT 59 1352624 1352743 TGTAATCCGCCCAATCTACC 59 NA Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 3 2 2 99 U 1911187 1911209 GTTAAATGGATCGACCGTAATCC 59 1911267 1937081 CCATGAAGCACTTTGGAGTC 59 NA Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979,FBtr0299977,FBtr0299978 1 3 3 60 X 149245 149263 ATTTGAGCAATCCTGCCCT 59 149287 149305 GTCATAAGTACGCTTGCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 3 3 3 99 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242176 242194 GCTACTGATGTGGCATCTG 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 2 6 8 85 X 398749 398768 TCAAGAAGCAGTTCAATGGG 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 1 2 2 89 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505986 506004 AGTATTGGTTCCCTGTCCG 59 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114559 2 1 3 80 X 528645 528664 CTCTTAAGTTGACCCGGGAG 59 528508 528604 GCGACAGAAATTTATTCCGGT 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 1 3 8 60 X 550407 550425 GTCACTATAGCCGTTTCGT 57 551147 551166 AGATTGCAACTTGATGCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 1 3 3 154 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654820 654839 GATTATGCGATCCTGACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 2 3 3 106 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237881 1237899 AGCCCAAGTTCTCGTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 3 3 3 82 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270782 1270803 CACAATATAGTCGAACAGCTCC 59 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 3 2 3 84 X 1365309 1365329 CTTTAAGGACTTCGTGTACCC 58 1365375 1365452 AACGTAATACTCGTGCGAG 57 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 3 5 6 163 X 1383725 1383743 AGAAGGTCATGGACAAGCA 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 2 1 1 173 X 1587254 1587272 TCACGTCTCGTGAGTTTCC 59 1587470 1587488 AGTCATGGGATCCTTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 1 2 3 80 X 1821881 1821899 AACCTTCGTCATCAACGAG 57 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 1 3 3 80 X 2003620 2003768 CAACATATTGCCATACGACCA 58 2003810 2003828 GCATTGATGTACTCGGCTC 58 NA Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463 2 1 3 167 X 2277627 2278281 GCCATTTAAACTCAGTTCCC 57 2275928 2275947 GCACTAACTCATTCAGTGGA 57 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 1 4 8 80 X 2384863 2386386 CAAGGAGAATAACGACGTTGG 59 2384803 2384821 ATACATTCGCCGTTCATGC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 3 4 8 80 X 2384863 2386386 CAAGGAGAATAACGACGTTGG 59 2384803 2384821 ATACATTCGCCGTTCATGC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0112811 1 1 8 88 X 2385410 2385428 ATATGTTTGCGAGGCTGTG 58 2384864 2385358 CAACGTCGTTATAGCGCTC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0070451 3 1 8 83 X 2416441 2417448 TGAATCTAGTGATATCGAGGAAGAG 59 2416382 2416400 CTGGAGTCATCGCTACCAG 59 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 3 4 4 180 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816602 2816620 TGGTTGAATCCAGGTCCAC 59 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 1 2 2 60 X 3465471 3465491 AAACAGACCGAATTCATAGGC 58 3465581 3465600 ATCCCATAAGACCTCCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 1 4 6 117 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848233 4848252 GTCATTAAATCCGCGTCCAG 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 2 4 6 118 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848235 4848253 GGTCATTAAATCCGCGTCC 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 2 3 4 80 X 5214528 5214600 AAATAATGGGCTATCCGGG 57 5214466 5214485 CACCATTGTATTCGCTTTCC 57 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 1 5 7 96 X 5277596 5277614 GACAATATGTCCGGGAACG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300466 2 1 3 86 X 5527488 5527911 CATATCAGGAAGCACCCGT 59 5527420 5527438 GCGTCAGATCACTATGGGT 59 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083 1 1 2 99 X 5601443 5601461 CACGATAATCGCCAACTGG 59 5601523 5601598 ACCAACTTTCTTGCAGATGC 59 NA Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 3 2 2 61 X 6484256 6484276 CACTAGCCCATATCATCTTGC 58 6484361 6484382 GCTGCCTTGATTCATATTATCC 57 NA DesignNoJunction Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300838,FBtr0300841,FBtr0100209,FBtr0100212,FBtr0300842,FBtr0100203,FBtr0100211 1 7 21 82 X 6980001 6981654 CCGGAATGTCACGTTATGC 59 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Nonspecific Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 3 2 3 167 X 7764352 7764370 GTTACGGAACAAGCTACGG 58 7764005 7764221 GCTTCGGGTTTATTGTCCT 57 NA Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 1 1 1 60 X 7966165 7966186 TGAAATAAGCGAGATAGACGAG 58 7966062 7966081 CTGATCATTCGATGACCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071112 3 1 3 142 X 7987885 7987903 ACAATAACACCACCCACGA 59 7984134 7984153 CATTCGTCAACTCTCACTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 2 3 3 60 X 8466511 8466529 AGCTGTAGCTCCAATTGTC 57 8466318 8466337 CACCTTGTTCAGTTCATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 1 2 2 92 X 8985203 8985454 CACAGCGTATTGAGAATGCC 59 8985509 8985527 AATCGACCTTGATGCTGCT 59 NA Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 1 2 2 113 X 9182502 9182520 AACGATGAGAATTGCTGCG 59 9182597 9187949 GAAGCTCTTCCCTCTTCCG 59 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0273354 2 1 2 96 X 9647339 9647592 TAACATCACAGCTAGTCGC 57 9647652 9647670 GGATGACTGTGATCCAGAG 57 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 2 4 4 136 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672354 10672372 GAAGAGTCCAAAGACACCG 58 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 1 2 2 81 X 10674283 10674301 AACTTGGCCAACGTAATCC 58 10674144 10674241 CGAGGAATACCGATTTGTACAC 59 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 1 2 2 115 X 10943063 10943081 TTACTGCCACAGATGTCCC 59 10943160 10943233 ATGATGAGTCCTCGCAGAC 59 NA InUTR Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 1 2 4 80 X 11329462 11329480 CGAATCTGGATGATTCGGA 57 11328832 11329418 TTATTGGCGTGGGATACTC 57 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 2 6 6 151 X 11688899 11688918 AAGTGCATTGACGTGTACAC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 3 6 6 174 X 11688876 11688897 CAATGGTTAAGACCTATTGCCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299532 2 1 2 80 X 12425101 12425120 CTATTCCGGTCTGGAATGGT 59 12423642 12425058 TCACAGATGGCAATCTCGA 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 2 2 6 91 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534865 12542580 CTGCCGTTGATCTGATCTG 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 2 2 6 91 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534865 12542580 CTGCCGTTGATCTGATCTG 58 NA Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 3 2 2 60 X 13200967 13200986 ATCGATCCAAGAAGGTAGGC 59 13201006 13201027 TCTAGTTTGAGATTTCCCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443 1 1 2 113 X 13479983 13480001 AATGGGTTGGCCAAATACC 58 13480078 13483963 GGCCTTTAACATAGTCCGG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301923,FBtr0301922 2 2 10 81 X 13493483 13494113 GAAGAGTACACCTCCGAGG 58 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 1 2 5 80 X 13544087 13546918 ATACCTGTATCAAGATCGCGG 59 13546960 13546978 CGAGGACGCCGATATTAGG 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073825 1 2 4 114 X 13700592 13700610 ATATCAGGCAATCTGGGCC 59 13700688 13702411 AGACACGACCTTCTTGAGG 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 1 4 9 103 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717401 15717419 CGGAATTCCAGTTTCGTCC 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301 3 1 9 116 X 16270192 16270284 CCACCTACAAATCGATTTCGT 58 16270362 16270692 CGCCATTCAGATACCACTG 58 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 1 2 2 80 X 16554496 16554581 CAGTTTCAAGCACAAGATGGA 59 16554623 16554641 CCCATGGAAGCGTATAGCT 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352 2 1 4 130 X 16651141 16654374 GTATTGGCAAGGTATGGCC 58 16651029 16651047 CATCGAAATCACCGGTGAC 59 NA Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096 3 1 2 81 X 16843603 16845030 GATGACAATAACCTGCTTCGA 58 16845073 16845091 CCTTGAACGTAATCCGCTC 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 2 5 6 117 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 1 2 6 174 X 17156846 17156864 GTATGATGAATCTGGGCGG 58 17157001 17163972 GTATTGGCGCAAATATCCAC 57 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598 2 1 3 84 X 18460582 18460600 CCAGTACGCTTATCAGTGG 57 18460645 18460737 AGTCATCATATTAAGGCTACCG 57 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 1 2 4 96 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040092 19040110 GAGAATCGTTGACTGCTGC 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 1 3 4 80 X 19234581 19234602 CTTACAGTCTTCCTCAACATGG 58 19228544 19234543 ATTGAAATAAGTTCCGAGCAGC 59 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 2 2 2 73 X 19506173 19506191 ATCTGTGTCCCGAAACCAG 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 1 2 2 100 X 20066407 20066425 GAGTACAAGGTGCTCTCCG 59 20066243 20066343 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569 3 3 5 80 X 20663681 20663702 CTGATCACATTCTCGATTGCTG 59 20663562 20663644 GGGAATGTCTCTTGTATGTACAC 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 2 3 3 60 X 21003758 21003776 ATTCCCATTGGAAGGAGGC 59 21003852 21003870 GTTACGAATGCGTTGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0299591 2 1 3 81 X 21004488 21004852 AATGCCCACTAAATACTGCA 57 21004896 21004914 CTTGATGGTGTTCCAGGTG 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 3 5 8 84 X 21247627 21247645 GCTAATACGCGCCTATCTC 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 3 5 5 97 X 21473853 21474023 TAATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349 2 1 5 91 X 21867279 21867297 CAGCAACACATACACCAGC 59 21867352 21868012 TCTCGCCAACGTACTATCG 59 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 3 3 5 138 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887886 21887904 CAATCGGCGATGTTTGAGG 59 NA InUTR Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113726 3 1 5 80 XHet 75300 75318 CAGACCTAGAGGCCAACAG 59 69219 75257 AGTATCGTCGGATTTGTCGA 59 NA InUTR Drosophila melanogaster 61 mir-263a FBgn0067722 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:57BCb FBgn0011872 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-307 FBgn0067697 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-308 FBgn0067696 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32362 FBgn0052362 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31577 FBgn0051577 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41508 FBgn0085791 FBtr0114244 2 1 1 65 YHet 320310 320331 GAACAGAAACCATTTGACATGG 58 320195 320287 TTGATCATCCTTTACTGCTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 kl-2 FBgn0001313 FBtr0300022 2 1 1 100 YHet 82961 82982 GACGTGTTAGCAATATTCTTCG 58 83039 122072 GATGGGCATATCTTCTATTACCG 58 NA Drosophila melanogaster 61 CR32496 FBgn0052496 FBtr0074499 3 1 1 87 X 17793236 17793254 AGGACAACGATGCCTATCG 59 17793305 17793401 CCATTGAGCATGCTCTTGG 59 NA Nonspecific Drosophila melanogaster 61 CG41106 FBgn0069938 FBtr0111194 3 1 1 196 X 22347661 22347680 GTCTCATCCTACTTCCACGG 59 22347839 22347919 AAGCGCTAATTAACTCGCG 59 NA InUTR Drosophila melanogaster 61 S6kII FBgn0011285 FBtr0077360 3 1 1 102 X 21934326 21934697 CTCTGCGATTTGGGTTTCG 59 21934761 21934781 GTCTCTTTAGAACCTCGGGAG 59 NA Drosophila melanogaster 61 Sep1 FBgn0011710 FBtr0077198 3 1 1 117 X 21230623 21230641 GAGTTCACCCTAATGGTGG 57 21230721 21230806 TTTGTTTCTCTATGGCGTCC 58 NA Drosophila melanogaster 61 tty FBgn0015558 FBtr0077224 3 1 1 93 X 21207504 21207816 GAGATCTACCTGGAGAGCC 58 21207429 21207449 GGGTCATGAGATAGAAGAGCA 59 NA Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 3 1 1 68 X 21192844 21192947 CTACTTCCTGGACGTGGTC 59 21192794 21192812 CCGTAAATCTCCATGCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15618 FBgn0031077 FBtr0289978 2 1 1 80 X 19755464 19755555 GGAGTCAACCTTAAATCTCAGC 59 19755405 19755425 ATTTCACGTGTCATCAGATCG 58 NA Drosophila melanogaster 61 skpE FBgn0031074 FBtr0074806 1 1 1 60 X 19717973 19717992 TGATCTTTCCGACGGAAGTC 59 19717932 19717951 TCCAACATGGTCTTGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 e(y)3 FBgn0087008 FBtr0074762 3 1 1 105 X 19524175 19524281 CTTCAACAAGTCCCGTAAGG 58 19524089 19524107 CTCTAGGCGTGTACAGGTG 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074715 2 1 8 95 X 19390735 19390753 TTCTGTATTCATCGGGTGC 57 19390812 19400528 GTTCCTTCTGCGTTTACGA 58 NA InUTR Drosophila melanogaster 61 CG12204 FBgn0031022 FBtr0074783 2 1 1 69 X 19388097 19388115 TTTGATGATCTGCAGGCAG 58 19388046 19388064 TGTGCTTTAGAACGTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8010 FBgn0031008 FBtr0074688 1 1 1 223 X 19161278 19161362 GAAGTATTACAGGCACCGC 58 19161073 19161091 GGAGCTCTTGATCCTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7884 FBgn0031001 FBtr0074674 1 1 1 102 X 19115093 19126312 TCAGTAATGGCTCTCCAACG 59 19126377 19126395 CCGATCTTACCGAGACCTG 59 NA Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074631 3 1 2 125 X 18669636 18669654 CAATTGGTGGAGAGCAAGC 59 18674794 18674812 GAACTTGAATACCGCCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 2 2 2 92 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584937 18584955 TGTAGGTCATCCCGAACTG 58 NA Drosophila melanogaster 61 CG15048 FBgn0030935 FBtr0299567 3 1 1 73 X 18415012 18415031 CAACATCGAGCTTAATCCCG 59 18415064 18415208 CTCGACTCTTAACCTTGAAACC 59 NA DesignRelaxed Drosophila melanogaster 61 Rad51D FBgn0030931 FBtr0074592 1 1 1 60 X 18394688 18394706 AATGTCCATGTATCGCCAC 58 18394730 18394748 ATCCTTGCAGAGCTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 betaCop FBgn0008635 FBtr0074576 3 1 1 82 X 18275999 18276087 CAACATGTACGCCAAGTCC 59 18275935 18275953 TCGAATCGGGATCATCGAC 59 NA Drosophila melanogaster 61 dik FBgn0030891 FBtr0074510 1 1 1 60 X 17980249 17980267 AGCTGGAACAGATGCTCTC 59 17980290 17980309 TCATACTCCGCTTTCAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 2 2 2 80 X 17974380 17974456 TCACAGTCCGAACTATGCC 59 17974318 17974337 TAGCAAGAGGACACAATCGA 58 NA Drosophila melanogaster 61 CG6867 FBgn0030887 FBtr0089574 3 1 1 80 X 17922031 17922120 TGACTGTGGAACTCTACTCC 58 17922163 17922181 CGGAGATTAAACGCTGCTC 59 NA Drosophila melanogaster 61 CG8211 FBgn0030858 FBtr0074480 1 1 1 81 X 17549867 17549885 CATGTGCGTGGATATGCTG 59 17549480 17549824 GAGGAAGGCTATCAGATCCTC 59 NA Drosophila melanogaster 61 B-H1 FBgn0011758 FBtr0074430 3 1 1 100 X 17295639 17295658 AGTACCTTAGCGTTCAGGAG 59 17295721 17295873 CTTCCATTTGGTTCTGCGG 59 NA Drosophila melanogaster 61 CG13000 FBgn0030807 FBtr0074416 1 1 1 60 X 16842439 16842460 TCTCTGAATTCTACCAATCCTC 57 16842400 16842419 TGCAGCAGTATATGGATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4789 FBgn0030792 FBtr0074333 1 1 1 137 X 16695495 16695513 TTCTCTTCGACATGGAGGA 57 16695614 16695698 CACACTTGTCGGCTATTCC 58 NA Drosophila melanogaster 61 TwdlY FBgn0052570 FBtr0074326 3 1 1 72 X 16629697 16629716 TATCAGGAGGACAACAATGC 57 16629751 16629769 AGCTACCATCGGGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gpi1 FBgn0086448 FBtr0074231 2 1 1 80 X 16254531 16254554 CCTTACTAGTGGACTTAATATCCG 58 16254591 16254666 CCACATTGTAGAGGACTTTGG 58 NA Drosophila melanogaster 61 CG8928 FBgn0030711 FBtr0074132 3 1 1 80 X 15839291 15839312 GCTACCTTGTGTACTTGAACAG 59 15839353 15839439 TCACAGCATGATTTGAGGC 58 NA Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 2 2 2 94 X 15821906 15821990 CAGGCAAGATCGGAAAGAG 58 15822045 15822066 AGATGGTATAGGACTCATTCGA 58 NA Drosophila melanogaster 61 CG8134 FBgn0030671 FBtr0074054 1 1 1 94 X 15598430 15598634 GCTTCTTCAAACGCTTTGC 58 15598692 15598710 ATACTGCTGTATGCCCGAC 59 NA Drosophila melanogaster 61 CG15643 FBgn0030654 FBtr0074072 3 1 1 63 X 15465609 15465627 CATCTACGGATTCGGACAC 57 15465486 15465505 ATACTCGTCATAGTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075 2 1 2 95 X 15365289 15365416 GCTTAAGTGACTGGTCGGA 59 15365212 15365230 CCATTTCCAAGAGGCTTCG 58 NA Drosophila melanogaster 61 CG18210 FBgn0030636 FBtr0074081 3 1 1 81 X 15334555 15334573 AAAGGATGAAGGACTGCTG 57 15314735 15315622 TTTATGCTGCGTAGCTGTC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 1 2 2 107 X 15200611 15204427 ATCTGGAGAACATGGAGGG 58 15204496 15204516 CAAAGTAGGGAATGTCTTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 1 2 2 126 X 14127233 14127251 ACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 CG11584 FBgn0030541 FBtr0073893 3 1 1 174 X 14075125 14075236 GTGAAGATGAAACCCTTTGCA 59 14075372 14075390 GGATTTGCGACTGGATGTG 59 NA InUTR Drosophila melanogaster 61 Yp3 FBgn0004047 FBtr0073821 2 1 1 83 X 13654210 13654228 GACTACGACTACACCAGCA 58 13654273 13654365 GTCAATGATGATCAAATCGCC 58 NA Drosophila melanogaster 61 Lig4 FBgn0030506 FBtr0073847 3 1 1 80 X 13560303 13560322 GCAGGGATCAAGATATCAGC 58 13560180 13560263 ATCAGCCCTTTGATGTAATCAG 58 NA Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073763 2 1 2 159 X 13223921 13223939 GAACGAACAAGAGGAAGCC 58 13225219 13225237 TCGCTCAACTTGATGTCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 1 4 4 175 X 13098181 13100760 CAAATAGAAGTGCCCGGTG 58 13098024 13098042 TTGTTAATGCGCAACAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32650 FBgn0052650 FBtr0073698 3 1 1 60 X 12791988 12792008 GAGGCCTACAAGAAGATACTC 57 12791948 12791967 GCTTGATCTCTGCATACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 2 2 2 219 X 12661316 12661334 CATCGTGTCGTTCAACTCG 59 12663853 12663961 GATGTTGAACATGCCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1806 FBgn0030360 FBtr0073574 2 1 1 80 X 11903137 11903157 TTGCCGTTTGGATACTAATCC 58 11903199 11903283 CCAATAGCAGCGACAATCC 59 NA Drosophila melanogaster 61 m FBgn0002577 FBtr0073555 1 1 1 80 X 11660923 11661022 ATTTCCGTGGTGACAATGTG 59 11661065 11661083 CAATTCCACTAACAGGCGG 58 NA Drosophila melanogaster 61 Or10a FBgn0030298 FBtr0073548 3 1 1 81 X 11310816 11310913 CACCCTTCAATATGACTATGCC 59 11310756 11310780 CCCGTATAGGCAATAAATATGTAGG 59 NA Drosophila melanogaster 61 Tim8 FBgn0027359 FBtr0073482 1 1 1 90 X 11262583 11262601 GAACCTTTCCGGCAATGAC 59 11262654 11262751 GTTGAACTCGTGTATCTGCG 59 NA Drosophila melanogaster 61 CG2186 FBgn0030243 FBtr0073381 3 1 1 198 X 10752398 10752481 TACTCTCGGACGAAGAGCT 59 10752640 10752661 CTTAAAGTTGGTGCTACCTCTG 59 NA Drosophila melanogaster 61 CG17841 FBgn0028480 FBtr0071444 3 1 1 102 X 10276536 10276626 CTCTCAAGGTCTTTCTACCG 57 10276691 10276709 CCATTTATAAGGGCGGTGG 58 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071413 1 1 4 164 X 9893324 9895895 CATCACCAAGCAAATCGAC 57 9896022 9896041 CTCTTAGAGCTCTCATCGTC 57 NA Drosophila melanogaster 61 CG12057 FBgn0030098 FBtr0071304 3 1 1 96 X 9086058 9086076 AAATTGCCTCCGATGTGAG 58 9086135 9086154 GAGTTCTTGTACGAGTTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662,FBtr0302663 3 6 6 91 X 8915675 8915767 GGCGATGTTCAAGTGAATCC 59 8915819 8915839 TCCTTGTCATAGTGGTACTGC 59 NA Drosophila melanogaster 61 CG12111 FBgn0030050 FBtr0071232 2 1 1 86 X 8464765 8464851 CTATAATGGCATTCCATCGGA 57 8464699 8464717 ACCTTATTCATGGGCTCGA 58 NA Drosophila melanogaster 61 CG12116 FBgn0030041 FBtr0071240 1 1 1 60 X 8362502 8362522 TGATGGATAATTTCATGGCGG 58 8362462 8362481 TGAAGGATTATGGAACGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 1 2 2 108 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328886 8328904 ATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 CG10555 FBgn0030034 FBtr0071174 1 1 1 122 X 8294598 8294616 ATCCCGTCTATCGGAATGC 59 8294702 8294996 TAGGACGCTGTTGATTGGG 59 NA Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 2 2 2 282 X 8143669 8143747 CTGAAGAAGCCGAACTGGA 59 8143405 8143423 TGTTCACGTAGATGCCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Ir7g FBgn0029968 FBtr0071088 2 1 1 104 X 7779948 7780023 CTACAGAAGCTGGTCCAGG 59 7780091 7780109 CGAGTAATGCGGAAACACG 59 NA Drosophila melanogaster 61 Ir7f FBgn0259188 FBtr0299672 3 1 1 118 X 7777632 7777703 CTATCAGGGTTTGCTGGAC 57 7777532 7777550 TCAATTGAAGCTCCTTGGG 57 NA DesignRelaxed Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0071005 1 2 3 136 X 6894185 6894203 TACAAGGAGGTGATCTCGG 58 6896811 6896829 TTAACCCAATTTCGGCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 3 2 2 141 X 6571897 6572033 ATGGCTGGCTGGAATAAGG 59 6571774 6571794 GATAATCTCCGTAGCCCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 vanin-like FBgn0040069 FBtr0070879 3 1 1 80 X 6094736 6094754 GCAAGATAGTTTGCTGCCC 59 6094611 6094695 TCTTGGACATAGCTATCTTCCG 59 NA Drosophila melanogaster 61 CG15766 FBgn0029813 FBtr0070832 2 1 1 68 X 5709297 5709315 TATCCGTCGACTGTACCAG 58 5709247 5709265 TGTTGATGAGCTGGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083,FBtr0301084 2 2 2 128 X 5601329 5601415 CCTTCTTCGATAAGAATAATCCCTG 59 5601501 5601519 CGATGCACATGTTGTTCGT 59 NA Drosophila melanogaster 61 CG32762 FBgn0052762 FBtr0070791 2 1 1 293 X 5394688 5394706 GTTGGCCAATAGTTGCCAG 59 5394316 5394334 ATTGTAATGTCTGGCCACC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL33 FBgn0040907 FBtr0070655 1 1 1 82 X 4216016 4216037 CAGTGGACATCAGTTTAATGCT 59 4215892 4215974 CCTGTTGAATGTACGGATCG 58 NA Drosophila melanogaster 61 CG15572 FBgn0029702 FBtr0070647 1 1 1 60 X 4163665 4163683 CCCTAACGCATACCAAGTC 58 4163707 4163725 TCCTCCTTATCCTTCTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng1 FBgn0002933 FBtr0070523 3 1 1 274 X 3136533 3136551 GATGATCCACGAGTCGGAG 59 3136789 3136807 TTCATTCATCGGATCTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 2 12 12 80 X 3228354 3228595 CGTCGCTTAAGTTCAAACG 57 3228639 3228657 CGGAAATCTGATTTCCCGA 57 NA Drosophila melanogaster 61 CG2701 FBgn0024973 FBtr0070498 2 1 1 85 X 2613915 2613933 CTGGAGGAATGGACCTTCG 59 2613789 2613867 TAGGACCAGAATTCGTGCTG 59 NA Drosophila melanogaster 61 CG2650 FBgn0000092 FBtr0070504 2 1 1 185 X 2587677 2587779 CTCCGAAGGATTTCCATCG 58 2587510 2587528 TTTATCGACTCCGAGTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8636 FBgn0029629 FBtr0070446 1 1 1 90 X 2504327 2504345 AAATCCGCTTAACTCGTGG 58 2504192 2504210 TTTGATCGTTTCAACGCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 gt FBgn0001150 FBtr0070460 3 1 1 148 X 2322755 2322851 TCTTCGATCTCAAGACTGATCG 59 2322628 2322646 GTAGGCCGTGTACAGATCC 59 NA Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 3 2 2 92 X 2167973 2168068 ATTTGTATAGGAAACGCTTCCC 58 2167902 2167920 AGAATTCATCGGTGTCGCT 59 NA Drosophila melanogaster 61 CG3457 FBgn0024984 FBtr0070392 1 1 1 60 X 2082265 2082283 GGAGATACTGAGACCCTCG 58 2082307 2082325 GGAATTAGTGGTGCCAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3630 FBgn0023540 FBtr0070385 1 1 1 80 X 2062228 2062246 GACGTATCGCATGAACTGG 58 2064845 2064863 CTGGTTGTTGAACATGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4025 FBgn0025624 FBtr0070375 1 1 1 95 X 1971286 1971304 CCACGGTTCCCTACATCAG 59 1971362 1971493 TAATTCCAAGCAGAACGCTG 59 NA Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0070356 3 1 2 142 X 1795298 1795477 CAGGTCATGGCTTCAAATCTG 59 1795176 1795195 TGAATACAAGACCACCAGCT 59 NA Drosophila melanogaster 61 CG14787 FBgn0027793 FBtr0070298 3 1 1 72 X 1355426 1355444 AATAGGAGTAGGCGTACCG 58 1355372 1355390 CATGGATGTACTGCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Suv4-20 FBgn0025639 FBtr0070151 1 1 1 92 X 547468 547486 ATCCAGCGCATATACGAGG 59 547263 547412 TCGGACGATATGATCGTGG 59 NA Drosophila melanogaster 61 CR41544 FBgn0085799 FBtr0114253 1 1 1 60 U 9578253 9578272 ATGTAGGTAAGGGAAGTCGG 58 9578294 9578313 TTCAGAGCCAATCCTTATCC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40571 FBgn0085746 FBtr0114196 1 1 1 62 U 8365655 8365673 CTGTTCTACGACAGAGGGT 58 8365699 8365717 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40641 FBgn0085760 FBtr0114210 1 1 1 60 U 8006204 8006224 CTGAAGATTGAGATAGTCGGG 57 8006246 8006264 AGAACGAGCACATAAACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40611 FBgn0085755 FBtr0114205 1 1 1 74 U 7445344 7445362 ATACCCGCTTTGAGGACAG 59 7445288 7445306 CTTCGAACAATGCGAGGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42419 FBgn0259850 FBtr0300147 1 1 1 152 U 7175850 7175868 CAGTGCGTTAATATGGCCA 58 7175980 7176002 CCAGGTGATTACCACTATTAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42413 FBgn0259844 FBtr0300142 3 1 1 68 U 6604894 6604913 CAACTACTTTCAGGACACGT 57 6604845 6604863 CAGGATCACTTCCAGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220,FBtr0089221 2 2 2 60 4 1050927 1050948 CCAATTACCGAAGATGATTTCC 57 1050888 1050907 AGCTTCCAAGAATTTCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 bip2 FBgn0026262 FBtr0089110 2 1 1 83 4 483732 483754 GTTCATAGATTATCCTGGACCAG 58 483118 483692 GAATCAGTAACAGGAGAATCCT 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1275 FBgn0086663 FBtr0091602 1 1 1 60 3R 5604129 5604149 GGTTGAGTACGGAAATACGTG 59 5604169 5604189 TTGGCCACCCTTAATTAAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31032 FBgn0051032 FBtr0085524 2 1 1 80 3R 25685367 25685440 CCGGCCTATAAGGTTTCCT 58 25685305 25685323 AGCGTTCTACCCTACTCCT 59 NA Drosophila melanogaster 61 Or85e FBgn0026399 FBtr0081896 1 1 1 105 3R 4460652 4460825 TAAATGGCCTGAGTTCGCT 59 4460565 4460583 AATCTCAGCAGATCCGTCG 59 NA Drosophila melanogaster 61 tre-1 FBgn0085056 FBtr0113492 3 1 1 60 3R 12591922 12591944 GACATAAAGAACACAGGTATGGC 59 12591884 12591902 TTTGTGTAACCGTGTGACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1635 FBgn0039854 FBtr0085796 1 1 1 80 3R 27414944 27414963 ATATGTGACCTATCTGGGCA 58 27415006 27415083 TTATGACAGCACCAAGCAG 58 NA Drosophila melanogaster 61 CG12063 FBgn0039851 FBtr0085790 2 1 1 104 3R 27328401 27328693 ATAACAGGGTACGTGCTATCG 59 27328759 27328777 GCAAGATTCATTGGCCTGG 59 NA Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0113312 2 1 2 105 3R 27052705 27052723 TCACCCTGACCAATCTTCC 59 27052790 27054428 TAAGAGGTTTCTGTTGCAGTG 58 NA Drosophila melanogaster 61 chp FBgn0000313 FBtr0085778 2 1 1 80 3R 27032426 27032500 AATTCGCTGATGAACACGAC 59 27032365 27032384 GATCCAGTTGTAGCTGAGGT 59 NA Drosophila melanogaster 61 bnk FBgn0004389 FBtr0085754 1 1 1 60 3R 27019568 27019586 CTTTGAGTCGGGTTTCAGC 59 27019610 27019628 TATGAAGCGGTTGTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi23 FBgn0039771 FBtr0085696 2 1 1 80 3R 26270014 26270097 ATTAATGGCTTAAAGAGGGTGG 58 26269955 26269977 GTAACCTCCTAAATGTTCTCCAG 58 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746,FBtr0089747 3 2 2 62 3R 25999319 25999338 GTCTTCTCTGTGTTCTCCCA 59 25999117 25999294 ATCCATGAGTTGGAAGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 3 2 3 170 3R 25574573 25574592 TGCTCGGTGTTATAACACTC 57 25574347 25574365 GTTCTTCACCGACTTCAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1972 FBgn0039691 FBtr0085476 3 1 1 88 3R 25572452 25572525 TGCCAAAGGCATTATGCAG 59 25572577 25572595 GCAGGAACTTCATCTTCCC 58 NA Drosophila melanogaster 61 CG1972 FBgn0039691 FBtr0085476 2 1 1 81 3R 25571394 25571491 ACTTCCACCTGGATCACTG 59 25571536 25571554 GGATGCGTCATGTAGATGG 58 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 2 2 2 92 3R 25570535 25570612 GAAGAAGCTTGCTTAAGGTG 57 25570462 25570481 CGGAGTAGCTAAGATTCTGG 57 NA Drosophila melanogaster 61 CG14515 FBgn0039648 FBtr0085389 1 1 1 63 3R 25023777 25024812 AAGTCTACTTCACGGGCAC 59 25024839 25024857 TTGTTCACAATGTCGCTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14521 FBgn0039617 FBtr0085347 3 1 1 84 3R 24752559 24752630 GCTCATGAAAGTGGAGTCCT 59 24752494 24752512 TATACACAAGTAGGCGCCC 59 NA Drosophila melanogaster 61 CG14523 FBgn0039612 FBtr0085349 1 1 1 60 3R 24704571 24704592 GACGAGGGAACAACTACTAGAG 59 24704532 24704552 GGCATATCCATTGATCACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14061 FBgn0039598 FBtr0085313 2 1 1 60 3R 24582930 24582951 GAATTAGCATTCGATGATCCTC 57 24582891 24582911 CAATGGAATTCTTGACTTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14061 FBgn0039598 FBtr0085313 1 1 1 60 3R 24583609 24583632 CGGAGATTCGATTTGATATACGAG 59 24583572 24583590 CCACGCCAGTCAATATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12259 FBgn0039557 FBtr0085270 2 1 1 60 3R 23746104 23746122 GAATGGGTAATGCAGCAGG 59 23746062 23746081 AGTAGCTGAACGTGATGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5590 FBgn0039537 FBtr0085215 2 1 1 60 3R 23504379 23504400 CTGTCTTCCAGTTCAACATCAG 59 23504421 23504439 TTCTTCAGGTCCAGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34006 FBgn0054006 FBtr0100061 3 1 1 87 3R 23045015 23045033 AAGGCTCGAGGAATCTTGG 59 23043886 23044967 CGCTCATAAATGAAACCTTTCG 58 NA Nonspecific Drosophila melanogaster 61 BM-40-SPARC FBgn0026562 FBtr0085094 2 1 1 60 3R 22695947 22695966 CATCGATGAGAACGAAGAGG 58 22695844 22695927 ATCCTTGATCTTGTTCTTCTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6403 FBgn0039453 FBtr0085044 1 1 1 176 3R 22561814 22561974 CACCATGCTGAAAGCACTC 59 22561656 22561674 CATTCGTCGGCTATCACCT 59 NA InUTR Drosophila melanogaster 61 CG6503 FBgn0040606 FBtr0085025 2 1 1 64 3R 22250590 22250608 CATTGAGCGTCCTGTTCAC 59 22250544 22250562 ACTTGTTGATGTTCAGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31324 FBgn0051324 FBtr0084985 3 1 1 135 3R 21933057 21950167 GCGTCTGGTGTGAATACAC 59 21950266 21950284 GATGCTGATGAAATGGCGG 59 NA InUTR Drosophila melanogaster 61 m1 FBgn0002578 FBtr0084957 2 1 1 69 3R 21840729 21840747 CGAAAGGAATAGCGTGCAG 59 21840842 21840860 ATTCTCGACGAACTCGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10420 FBgn0039296 FBtr0084870 1 1 1 97 3R 21061052 21061070 GATGCTTACAAGTGGCAGC 59 21060910 21060991 AATAGCTTGACCTTCCGCA 59 NA Drosophila melanogaster 61 CG31103 FBgn0051103 FBtr0113389 2 1 1 80 3R 21045315 21045333 GCAGTGCGAATTTGAAACC 58 21045374 21045462 TAGGTCGATAGGAAGATACCTG 58 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 2 3 3 97 3R 20924347 20924365 GCTGTGATACTCCATTCGC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 OstStt3 FBgn0011336 FBtr0084786 3 1 1 80 3R 20893572 20893647 ACAGTCAAGATGGATCCCG 59 20893510 20893528 CATCATCGGCAGTGTTCTG 59 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558,FBtr0112559 1 2 2 80 3R 20889039 20889118 CAATCAAATCTTGACAAACGCC 59 20889157 20889177 AAAGCAGTCCATCATTGTCTG 59 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 3 1 1 152 3R 20630071 20630089 CATGTCTGTTCAACGAGCC 59 20629879 20629955 TTAGTGCAGCAATTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622,FBtr0084621,FBtr0113280 2 3 3 85 3R 20210141 20210160 CAGAAGAAGGATAATGCCGT 57 20209977 20210093 AAGCCATGTCCATCCAGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17782 FBgn0039195 FBtr0084624 2 1 1 82 3R 20196736 20196930 GTATCTGGACAAACGAGGTC 58 20196673 20196691 CATGCTCCGTCGATTTCTG 59 NA Drosophila melanogaster 61 CG6182 FBgn0039158 FBtr0084551 1 1 1 81 3R 19988340 19988358 AAGGACATAAGGTCCTCGA 57 19988403 19988477 CGTCAAGATCCTTTACCGT 57 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0084579,FBtr0084578,FBtr0100518,FBtr0100519,FBtr0100516,FBtr0100520 1 7 7 96 3R 19985254 19985383 ACTCTAGTCGATATGGAAAGCT 58 19985030 19985048 TAGGGTCCGTTATACGGGT 59 NA Drosophila melanogaster 61 CG10694 FBgn0039147 FBtr0084542 1 1 1 60 3R 19933621 19933639 CCTCAGGAGGTTGTTTCAG 57 19933663 19933681 GATCACTTGTCTGTACGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg6 FBgn0010709 FBtr0084590 2 1 1 100 3R 19876177 19876254 GAGTTATCTTTGCCCATCTACG 59 19876098 19876116 GAGTCCGTAAGCCTGTAGG 59 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 1 2 2 107 3R 19760641 19760755 TAAGCGCTATTTGATGCCG 58 19760825 19760844 ACGTGCACAGTATTCAAACG 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 2 2 2 134 3R 19655747 19655912 GGCATTAAGGGTCAAATCTACG 59 19656007 19656025 AATGATGTAGCCATCGGGA 58 NA Drosophila melanogaster 61 CG6763 FBgn0039069 FBtr0084378 1 1 1 90 3R 19111281 19111299 CTTCTCCATCAACGGACAG 58 19111419 19111437 ATCGTAGTCGGAGAAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 3 2 2 80 3R 19057610 19057629 TTTCCAGTCACCTATGTGAC 57 19057480 19057569 CACATTGAAGGTTACATCCAC 57 NA Drosophila melanogaster 61 CG33107 FBgn0053107 FBtr0084279 3 1 1 81 3R 18410266 18410284 TGTCCTTTCTCCGGAAGTC 59 18410147 18410221 CGATTCAGCAACTGTTTGC 58 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 1 3 3 82 3R 18370410 18370491 TAATTCTGATGGGCCTCCT 57 18370346 18370364 AAACTTTCCAGGGAACCAG 57 NA Drosophila melanogaster 61 CG33099 FBgn0053099 FBtr0084288 2 1 1 80 3R 18355700 18355771 CAGAGGACAAGATCAAAGCTG 59 18355640 18355660 GTCTGTAACGATCCTGAACCT 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252 3 1 3 81 3R 18288243 18288321 CACTGTCCATATAGCGCAC 58 18288366 18288384 GTAAACTCGCGAGATCAGC 58 NA InUTR Drosophila melanogaster 61 lsn FBgn0260940 FBtr0084135 1 1 1 76 3R 17691670 17691751 ATCAAGGATTTGGGCTGGA 59 17691791 17691809 ATCCAACAGAGACCTTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6353 FBgn0038893 FBtr0084116 3 1 1 96 3R 17487929 17488448 GATGTTCAAATCCACGGATGG 59 17487853 17487871 ACACGTAATCCAGTTCGGT 59 NA Drosophila melanogaster 61 CheB93b FBgn0051438 FBtr0084090 3 1 1 124 3R 17235002 17235020 GAGTTGGCTGATCTTTCCC 58 17235108 17235188 ATGTTTACTTCAACCGCGA 57 NA Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 1 1 1 270 3R 17206666 17207113 AAGGATAACAGCCAGGTGAC 59 17207346 17207364 ATTTGTAGCGCCGATTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 2 2 2 80 3R 16479491 16479512 GCCCAATATAGCAACTATACCG 58 16479270 16479451 GTCTGCGATATTCTCACCCT 59 NA Drosophila melanogaster 61 MtnD FBgn0053192 FBtr0083902 2 1 1 143 3R 16360755 16360839 GTGGAACAAACTGCCAGTG 59 16360946 16360964 GATGAGCTCGAGATGGGTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 trem FBgn0038767 FBtr0083840 2 1 1 83 3R 15856840 15856858 GCTCCACGACATATTCAGC 58 15856721 15856793 TCTAGGCTGACTGGAATGC 59 NA Drosophila melanogaster 61 CG4424 FBgn0038765 FBtr0083841 2 1 1 81 3R 15853460 15853540 GAATTCAGATAAGGGCAACG 57 15853398 15853416 GCCAGAGTTAGAAATGCCT 57 NA Drosophila melanogaster 61 psidin FBgn0243511 FBtr0083829 1 1 1 80 3R 15851374 15851457 GCCAGTTTAGAGATGCTATCG 58 15851497 15851517 CTTGGTCTTTGAGCTTACCTG 59 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 1 2 2 80 3R 15708429 15708449 TATGATCCTGGAGATGACTGC 59 15708487 15708575 TCGTACTCGTACTCGATATTAGC 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492,FBtr0083805,FBtr0083806 3 3 3 80 3R 15463905 15463997 GGAGTATCTCTTTGACATCCG 58 15463845 15463865 CGATCTAGGATGAACTCAACG 58 NA Drosophila melanogaster 61 Cpr92A FBgn0038714 FBtr0083811 3 1 1 73 3R 15424203 15424555 TGCTGAAGATTTCCCTGCT 59 15424148 15424166 ATAGTATGGTCCGGGTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG3739 FBgn0038702 FBtr0083757 2 1 1 80 3R 15219556 15219639 CCTATAACTCCTCTGTCCACTG 59 15219677 15219698 AATCACGTTAATCACATCAGCC 59 NA Drosophila melanogaster 61 mRpL55 FBgn0038678 FBtr0083754 2 1 1 94 3R 14920297 14920374 AGATTATCAAGCTTCCCTTGGA 59 14920224 14920242 GATCTTGACCTTCTTGCGC 59 NA Drosophila melanogaster 61 CG14292 FBgn0038658 FBtr0083725 2 1 1 66 3R 14731301 14731319 GCAATTGTTCTACTGGCGG 59 14731178 14731196 TTCCAACAGTAGCTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775,FBtr0083684 3 2 2 80 3R 14562186 14562267 CATCAAGTAGCAATGAATCCAC 57 14562127 14562145 ATCCCTTACGCATATGGCT 58 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775,FBtr0083684 1 2 2 80 3R 14562185 14562265 TCAAGTAGCAATGAATCCACC 58 14562125 14562143 GGATCCCTTACGCATATGG 57 NA Drosophila melanogaster 61 CG31230 FBgn0051230 FBtr0083666 1 1 1 60 3R 14497532 14497551 GGATCGTTGGAGAAAGATGG 58 14497573 14497592 CTCGGCTTTGTCAATCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31224 FBgn0051224 FBtr0083691 1 1 1 95 3R 14478940 14479022 GAGTGAGTCGGTTTATGGG 57 14478863 14478881 GCCGGATAATAGTCCTGTC 57 NA Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 3 2 2 170 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115415 14115491 AACCAATTCGTTCTCCTGC 58 NA Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358 1 1 2 138 3R 14114261 14114279 ATTGCAACACGTATTGCCA 58 14114076 14114094 ATATGGTGTCCGTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31251 FBgn0051251 FBtr0083484 1 1 1 103 3R 13509944 13509962 CATCCTCGAGGGAAACCTG 59 13509800 13509879 AGAGCTCCTTTGCTTTATCGT 59 NA Drosophila melanogaster 61 CG10340 FBgn0022344 FBtr0083358 1 1 1 107 3R 12439834 12439852 CATCAAAGATGGGCAGAGC 59 12439689 12439707 TCAGTGAGCTTCTTGTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pbp45 FBgn0038371 FBtr0083190 2 1 1 60 3R 11665106 11665126 GAATATCTTTGACGACTGCTG 57 11665066 11665085 GCCATCATTAACCAATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31392 FBgn0051392 FBtr0083088 1 1 1 80 3R 11174098 11174117 GCAGTATTACCACCTCACCT 59 11174160 11174237 CTGGTAGCAAATCTGCGTC 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129 2 1 3 203 3R 11087616 11088283 TCACAATCAAGCTGGAACG 58 11087431 11087449 TGCGTCTATCTACACTGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG6752 FBgn0038296 FBtr0083029 1 1 1 80 3R 11019519 11019537 CTAGGTTGGGATCAGCTCG 59 11019385 11019478 GCGTAGTATCCACTTCATTGAC 59 NA Drosophila melanogaster 61 twf FBgn0038206 FBtr0082891 1 1 1 110 3R 9948437 9948455 TCTCACCAAACGGGTATCC 59 9948587 9948707 ACTAAGCTGCTCATTCTCGA 59 NA Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 1 1 1 105 3R 8822346 8822423 AATGTTGTCTACACATCCGTG 58 8822490 8822508 TAACTCGCTCCGTGATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 mbo FBgn0026207 FBtr0082668 2 1 1 60 3R 8503781 8503799 GGAAAGCTTCACCATGCTC 59 8503739 8503759 CCTCATTGAAAGAATGCTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14741 FBgn0037989 FBtr0300351 3 1 1 80 3R 7897156 7897174 AATACAGGATTCGCTCTGG 57 7897032 7897113 GTCCAGGAATTTGTTCTCCA 57 NA Drosophila melanogaster 61 Ect3 FBgn0260746 FBtr0082487 2 1 1 86 3R 7827075 7827093 CTACTTCCGTGCTCATCCA 59 7827143 7827217 TCCACATAGGTTGTCACCG 59 NA Drosophila melanogaster 61 Tango9 FBgn0260744 FBtr0082508 1 1 1 80 3R 7799940 7800042 ATCGTCGTGGAGTTATATCCG 59 7799880 7799899 GCAATAGCATGCTAACAGGG 59 NA Drosophila melanogaster 61 CG31389 FBgn0051389 FBtr0082419 1 1 1 68 3R 7467652 7467670 TATTGCCCAACGGTTAGAC 57 7467701 7467720 GCAGATTTAGTTTCAAGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ninaG FBgn0037896 FBtr0082404 1 1 1 92 3R 7245310 7245474 GGTAGATGCTAGTGTACTACCC 59 7245239 7245257 TTCAGAATCCAAGAGGCGG 59 NA Drosophila melanogaster 61 Ugt35a FBgn0026315 FBtr0082374 2 1 1 134 3R 6997999 6998084 AAATAATGGCGGCATTTGG 57 6997883 6997903 TCAGTAAATCCTTTACAGCCG 58 NA Drosophila melanogaster 61 Tsp86D FBgn0037848 FBtr0082288 3 1 1 116 3R 6695300 6695375 GGATTGGAGCAAGAACGAG 58 6695455 6695473 ATGATGTTCACTAGGCCGG 59 NA Drosophila melanogaster 61 CG34304 FBgn0085333 FBtr0112500 2 1 1 241 3R 6482297 6484118 GCCTTTAATATAATTCCCGCG 57 6484321 6484339 GTTTCACCTGAGACACTGC 58 NA DesignRelaxed Drosophila melanogaster 61 cwo FBgn0259938 FBtr0082246 3 1 1 106 3R 6215148 6222426 CAAGTATGAGAGCGAAGCAG 58 6222494 6222513 CATATTCAGCATCGTCCTCG 58 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215 3 1 2 81 3R 5826084 5826312 GGATTATACTTTAATGGGTAGGCAC 59 5826027 5826045 CATCCAATGAAGCACGACG 59 NA InUTR Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213,FBtr0113212 2 2 2 134 3R 5606165 5606187 CTACAACAACTACTTCATCCACC 59 5607460 5607478 CGAAACTCCAGAAGTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Snap24 FBgn0028401 FBtr0082163 3 1 1 73 3R 5588321 5588340 AAGAACTTGAGTGGCATGGA 59 5588267 5588285 TCGTCCTTGATGTTCACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12948 FBgn0037739 FBtr0082167 2 1 1 173 3R 5572704 5572781 TTCCAATGCCGCATTAAGC 59 5572549 5572570 ATTTAAATGTACGGCTACGTCG 59 NA Drosophila melanogaster 61 CG18542 FBgn0037731 FBtr0082084 1 1 1 87 3R 5511901 5511977 AGTTGATGAGGACCAAACCA 59 5512027 5512045 TAGCTAGCTTCCTTCGGTG 58 NA Nonspecific Drosophila melanogaster 61 AP-47 FBgn0024833 FBtr0082114 3 1 1 100 3R 5384083 5384160 TGAACACGCATGTCAAACC 59 5384001 5384019 CTTGAACTGAGACTTCGCC 58 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 2 2 4 109 3R 5180480 5180498 GGAACGTGAATCTAACCCA 57 5180569 5180659 TTCTAAGCGAGTCCTTATAGC 57 NA Drosophila melanogaster 61 CG8112 FBgn0037612 FBtr0081904 1 1 1 95 3R 4539480 4539873 CTGAAACCGCACAGTTCTC 59 4539932 4539950 CGAAGTCGACACGAAACAG 59 NA Drosophila melanogaster 61 mRpL19 FBgn0037608 FBtr0081901 2 1 1 119 3R 4499960 4500030 TACAAGCGGATTGTGACCT 59 4500113 4500131 GATTGTCTTCCGGTTCACC 58 NA Drosophila melanogaster 61 PQBP-1 FBgn0250829 FBtr0301971 3 1 1 85 3R 4205094 4214315 GGCAATGAAGTTGAAGGTCAG 59 4205029 4205047 GATCTTGGCTCGACTTCGA 59 NA Drosophila melanogaster 61 Arf84F FBgn0004908 FBtr0081838 1 1 1 80 3R 4167321 4167341 TAGTTCTCTGCAACAAACAGG 58 4167377 4167459 TGATATCCTCTAGGTGTAGTATCTC 58 NA Drosophila melanogaster 61 Ctr1B FBgn0062412 FBtr0081835 2 1 1 112 3R 4143507 4144166 ATGATCATGGTGTTCCACG 57 4144242 4144260 AAGGACACCAGGAAGATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mtg FBgn0260386 FBtr0300601 2 1 1 86 3R 4085351 4085369 CACCTACAAGCTTCTCCTG 57 4085418 4085508 ATACGTGGAATACCATGCAG 57 NA Drosophila melanogaster 61 CG9667 FBgn0037550 FBtr0081815 3 1 1 142 3R 3951657 3951736 ATACAGAATGCTGGCTTGG 57 3951533 3951551 AACATCTTGGGACCATAGC 57 NA Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 2 1 1 105 3R 3737337 3737432 GTTGCGTAAATCAGCAGCA 59 3737250 3737268 GTTCCACCTGTTGTTGCTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 alpha-Est1 FBgn0015568 FBtr0081544 3 1 1 90 3R 3373498 3373516 TTCAATTATAGGGTGGGCG 57 3372812 3372830 TCACTTGGTCCTTGAGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Ubc84D FBgn0017456 FBtr0081552 3 1 1 61 3R 3344909 3344927 CGCATCGAAATCAACTTCC 57 3344866 3344888 GTCTTGAATAGGATCTTTGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 1 2 2 95 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322511 3322529 CTGTAACATTCCCGTGAGG 58 NA Drosophila melanogaster 61 CG42656 FBgn0261508 FBtr0302437 3 1 1 103 3R 3318954 3318972 CTGGACAAGTCGAAATGGA 57 3318813 3318831 GGAAGGAACATCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mst84Dd FBgn0004175 FBtr0081588 1 1 1 63 3R 3189137 3189155 AAACGAAATGGCCTTCAGC 59 3189092 3189111 GTTTGGTTGCTTATTCGGGA 58 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184,FBtr0081572,FBtr0302183 1 3 3 80 3R 3016482 3016502 AATCTCAGCTCCTTTCTGGAC 59 3016877 3017121 CATATCGTAACCCATTCTGCC 59 NA Drosophila melanogaster 61 CG10055 FBgn0037482 FBtr0081605 2 1 1 88 3R 3011923 3012036 GCTGTACAAATTCCACAGC 57 3011853 3011872 GGTAGTGATTCTCTGTCGTG 57 NA Drosophila melanogaster 61 CG18048 FBgn0037435 FBtr0081712 3 1 1 60 3R 2172090 2172111 AAGCTAGAGAAGATTCCTTCCA 58 2172130 2172150 ACGGTATGTTTGTGATCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpn5 FBgn0028690 FBtr0078629 2 1 1 80 3R 1616698 1616716 TCAAGGATAGCACCAAGCA 59 1616757 1616840 CAATGATGCGAATGTTATGCTC 58 NA Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 3 2 2 95 3R 1476894 1476980 AGTTGATTCGTCTGTGCCA 59 1477039 1477057 TGAATTGCGGGAATAGGCT 59 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 3 2 2 82 3R 1395125 1395144 AATCGTCGCTATGCATACAG 58 1395187 1395310 GATCTTGGTGAAGGTGTTCTC 58 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078755,FBtr0078757 1 4 4 86 3R 1385032 1385110 TCCTCTAAAGACTGGCTCCT 59 1384965 1384983 AAGGGTTCGCTTTCAAAGC 59 NA Drosophila melanogaster 61 Hdac3 FBgn0025825 FBtr0078767 1 1 1 124 3R 1299892 1299910 ATGAAGATCTACAGGCCGT 58 1299655 1299742 GTATAGGCCACGGAATTGC 58 NA Drosophila melanogaster 61 Hus1-like FBgn0026417 FBtr0078876 3 1 1 64 3R 634985 637713 GGTTGAAAGTTCTTTGCTGAC 58 634941 634959 TTCATGTACAGCGGATCCT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Nep2 FBgn0027570 FBtr0078891 2 1 1 80 3R 546430 546716 AGAGAACAGTATTCAATTCCCG 58 546371 546391 CCAAAGTTCATGTACTTCGGA 58 NA Drosophila melanogaster 61 CG13239 FBgn0037197 FBtr0078548 2 1 1 60 3L 22854152 22854171 CAAAGACAGTTTCTGTGCCA 59 22854194 22854212 GGAGTTACCGGTAATGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11523 FBgn0037156 FBtr0078511 1 1 1 60 3L 22259535 22259555 GCTGAGATTTGCATCTCATCC 59 22259495 22259515 GGATGTTCAGGTAAATTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ddx1 FBgn0015075 FBtr0078492 2 1 1 99 3L 22256590 22256662 CATTCGAAGAGTTTGGCGT 58 22256778 22256796 ATCAGAGGAATGGCCTCAG 58 NA Drosophila melanogaster 61 RpLP0 FBgn0000100 FBtr0078481 1 1 1 90 3L 22069434 22069526 AGGTTGTGGAACTGTTCGA 59 22069580 22069598 CTGGTACGGATGTTCTGCA 59 NA Drosophila melanogaster 61 CG14573 FBgn0037125 FBtr0078433 3 1 1 73 3L 21727736 21727755 TTTACTATGTGGGTGCCCAG 59 21727791 21727809 CTACCAGCCTAGTTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7181 FBgn0037097 FBtr0078382 1 1 1 220 3L 21532496 21532515 AGCATTCTAACCTTACAGCA 57 21532219 21532237 GAATGAACAAGGATGCAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3288 FBgn0037030 FBtr0078262 2 1 1 112 3L 20829519 20829537 GGGAATACCTGGACAGCTC 59 20829612 20829695 TATACGCATCACCGAAGAGG 59 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0300452 1 1 2 134 3L 20466278 20466701 TTCTTTAGCAACTGCTGCG 59 20466162 20466181 GTACTGTACGAAATCGTGCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 3 1 1 103 3L 20402754 20403380 TCGACATCGCTCTATTGGG 59 20402669 20402689 GGATAATATGATCCCGGGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 DNApol-alpha60 FBgn0259676 FBtr0078241 3 1 1 60 3L 20353453 20353472 AGATTATCAAGGATGTGGCG 57 20353412 20353432 TCCATGTTCTTATACGGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179,FBtr0273280 1 2 2 84 3L 20349367 20349449 GTCGACTTTACACTGTGGC 58 20349496 20349515 GCTTTAAGAGGCGAGTAACC 58 NA Drosophila melanogaster 61 CG42263 FBgn0259148 FBtr0302430 1 1 1 80 3L 19948286 19948359 TTAGTGACGTTGGGAATCG 57 19948224 19948242 GAATTCATCTGGATGCGCT 58 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 2 5 5 80 3L 19795876 19795894 ATAAGCTCATTTGGACGGG 57 19795938 19796013 AACCAAGAAGAACTGGGTC 57 NA Drosophila melanogaster 61 CG14102 FBgn0036906 FBtr0074928 3 1 1 138 3L 19793615 19793836 TGCACAGCTAGATCAATTGC 59 19793496 19793515 GAAATTGAGAAGCAGTCGCT 59 NA Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 2 2 2 60 3L 19612347 19612365 GTTCGAACTCACGTTCGAG 59 19612386 19612407 GATCATCTTCCACTCTAGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 1 1 1 78 3L 19121728 19121814 ATGACTATAGATGTGGGCGA 58 19121669 19121687 TGTCCTTGACTACGAACAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3797 FBgn0036842 FBtr0075037 1 1 1 164 3L 19055233 19055251 GTGATGGAAAGGTTCACCC 58 19055020 19055105 ATAGTAGAAGGCCAAGCCT 57 NA Drosophila melanogaster 61 CG34256 FBgn0085285 FBtr0302318 1 1 1 84 3L 18982310 18982578 ACTTTGAAGAGCTGGATCTG 57 18982245 18982263 GGTAAGGAACAATGCAGCT 58 NA Drosophila melanogaster 61 Cyp12c1 FBgn0036806 FBtr0075091 2 1 1 103 3L 18679021 18679039 GAACCCGTCATCCACTACC 59 18678759 18678778 ACGGCACTTCTATTCTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34254 FBgn0085283 FBtr0112448 3 1 1 117 3L 18673527 18673547 ACTATTATCTGGCAGACTGAC 57 18673626 18673697 CAAGGACTAGATGGCACTC 57 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 1 3 3 80 3L 17873599 17873689 TCCTATAAATACGGGAATGCAG 57 17873729 17873748 GCCATGGTAGTCTCATTGAG 58 NA Drosophila melanogaster 61 Grd FBgn0001134 FBtr0075139 3 1 1 89 3L 17830729 17830846 AAACAAATCATCCGTCGGA 57 17830899 17830917 GACCGTACACCTGAATCAG 57 NA Drosophila melanogaster 61 CG32186 FBgn0052186 FBtr0075172 2 1 1 80 3L 17788549 17788720 GAGTCAAGGTTCTCATCTGC 58 17788488 17788507 CCAGTATTAGTCTCCACAGC 57 NA Drosophila melanogaster 61 CG32182 FBgn0052182 FBtr0075188 2 1 1 60 3L 17751860 17751880 CTTGTATGATTACCGCCTGTG 59 17751902 17751920 GTCAATAGACGGAGTCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3764 FBgn0036684 FBtr0075297 1 1 1 80 3L 16992892 16992910 AAGATTCCGTCGAAGTCAC 57 16992639 16992848 TCGATTGTGCTTATAGCCG 57 NA Drosophila melanogaster 61 CG13027 FBgn0036681 FBtr0113177 2 1 1 81 3L 16937689 16937767 ACAAGTTGGTTAATGAGGCC 58 16937811 16937829 GAGTCATCGTTCGGATCGA 59 NA Drosophila melanogaster 61 CG13023 FBgn0036677 FBtr0075307 3 1 1 102 3L 16919073 16920342 ACTGAAACAATGTTCCTCCTC 58 16918991 16919009 TCACAATCACGATGTGCTG 58 NA InUTR Drosophila melanogaster 61 CG13028 FBgn0036676 FBtr0075261 1 1 1 60 3L 16916619 16916638 CAATCAGAGTGGCAGTAACC 58 16916661 16916679 CAGAGCCTGAAGAACTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32159 FBgn0052159 FBtr0075409 3 1 1 80 3L 16419917 16419935 TCAGCAAGTTTGTAACGCC 59 16419744 16419875 GGATCACGATATCTGGATGGA 59 NA Drosophila melanogaster 61 CG13038 FBgn0040795 FBtr0075429 2 1 1 60 3L 16320843 16320861 CCATAGTCAACCCATTGGG 57 16320674 16320819 CTAAGGCCAGAAGCAACAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13040 FBgn0036608 FBtr0075431 1 1 1 159 3L 16318781 16318866 GTTCCGCTTCATTGCTATCTG 59 16318642 16318660 GTACTGGGTGAAGCTCTGG 59 NA Drosophila melanogaster 61 CG13063 FBgn0036601 FBtr0075366 1 1 1 71 3L 16299751 16299833 TCAAATTGGTGGTGTTGTCTG 59 16299863 16299884 GAGGAGACTCATAAAGATGACC 57 NA DesignRelaxed Drosophila melanogaster 61 CG32154 FBgn0052154 FBtr0075460 1 1 1 168 3L 16231023 16231643 GTGGTTCCCATTTGGATCG 58 16231775 16231793 ATTGGTAGATGAGCTCGGC 59 NA Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 1 2 2 153 3L 16126325 16126398 CAAAGGGCAAAGAGACTGC 59 16126513 16126533 CAATTTGGTTCTGTGCATCCA 59 NA Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 1 2 2 80 3L 16087581 16087599 TATCCGTTCCTAGACAGCA 57 16087643 16087719 AGTTTCATTCCGCTTTGGT 58 NA Drosophila melanogaster 61 CG13075 FBgn0036563 FBtr0301031 1 1 1 141 3L 16077652 16077725 TCCGAATTTCTTGGATTGGA 57 16077828 16077847 TAGGATTGGTACTAGGCTCG 58 NA Drosophila melanogaster 61 dbo FBgn0040230 FBtr0075505 1 1 1 81 3L 15822970 15823128 GATCCCAGACACAACAAATGG 59 15823169 15823189 AGTTATTGAACACAGCACAGC 59 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543,FBtr0075541,FBtr0075542 2 3 3 120 3L 15809126 15809144 AAGATAACGGGTCTGCTGG 59 15806715 15809043 AAAGAATGGCAAAGAAGGCG 59 NA Drosophila melanogaster 61 Eig71Ek FBgn0014851 FBtr0075575 3 1 1 123 3L 15654388 15654469 TGCTGTTGGTTCTTTGTATCC 58 15654549 15654572 GTCTCATCAAATCGTCCTATTCTG 59 NA Drosophila melanogaster 61 CG7841 FBgn0036502 FBtr0075604 2 1 1 61 3L 15499243 15499342 CGTTACATAAATGACTCCTGGA 58 15499203 15499221 GATGAGCTCGAGTCGTAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7276 FBgn0036499 FBtr0075546 1 1 1 60 3L 15491421 15491439 CGATCCGAGGTAATGTCCC 59 15491463 15491481 TATCCTCATTCCCAGGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 1 1 1 79 3L 15490374 15490460 GTTACGTTGAGCTCTCCGT 59 15490502 15490521 TTGAAGTACCTTGAGAGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG18649 FBgn0036469 FBtr0075663 1 1 1 60 3L 15047006 15047024 CGACGACTTAGATGAGCCT 59 15046964 15046985 TTCGGAATCATCATTGTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12310 FBgn0036467 FBtr0075665 1 1 1 60 3L 15043740 15043758 CGATGAGGATTCGACTAGC 57 15043698 15043716 AGATTCCTCCGCATCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13477 FBgn0036438 FBtr0075685 2 1 1 60 3L 14684690 14684711 TCTGAACCGAATCATTAATCGC 59 14684732 14684750 CCTCTTCATCTGGACCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075723 2 1 2 191 3L 14540570 14543645 CAATTAACGCTACAATGACGAG 58 14540400 14540418 ATTCGCTCCAGGTAACTCC 59 NA InUTR Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 1 2 2 112 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075456 14075478 GTACTCCGTATCTTGGATATCCC 59 NA Drosophila melanogaster 61 CG8745 FBgn0036381 FBtr0075801 3 1 1 100 3L 13855090 13855108 CTTCGTCAATTCCGGATCC 58 13854888 13855026 CATGATAGGCATGGTCGAG 57 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 1 2 2 80 3L 13432678 13432760 CTAAGTCGGACTGTCAGATCC 59 13432618 13432638 TTCCTACAGTAGTAACGGGTG 59 NA Drosophila melanogaster 61 CG10154 FBgn0036361 FBtr0075854 3 1 1 100 3L 13429170 13429331 TTAACTGCACGATTGATGCT 58 13429089 13429108 GAAGTGAGTTCCCATAAGGG 57 NA Drosophila melanogaster 61 Klc FBgn0010235 FBtr0075951 3 1 1 80 3L 12740048 12740067 ACAATTGCTAACGTCAAACG 57 12739920 12740005 TTCGCATTCTTCTCCTCAG 57 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 2 2 2 105 3L 12698330 12698349 ATCTGAAGGAGAACCTGGTG 59 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 sti FBgn0002466 FBtr0075970 3 1 1 80 3L 12506918 12506995 CAGTATGCCTTTCAGGATAACG 59 12506859 12506878 TGACATCAAGCTGAGAAGGT 59 NA Drosophila melanogaster 61 l(3)neo18 FBgn0011455 FBtr0076023 3 1 1 103 3L 12130869 12130946 CCAGATTCGACTCCTTGAG 57 12130784 12130802 AAATCCTGTGGTACTTGGC 57 NA Drosophila melanogaster 61 CG5645 FBgn0036254 FBtr0076024 1 1 1 88 3L 12127977 12128056 TAGAAGAGATCTTGCTGGCC 59 12127908 12127926 CTCTACGTGTTCCGGTCTG 59 NA Drosophila melanogaster 61 CG17154 FBgn0036246 FBtr0075990 3 1 1 60 3L 12082044 12082064 GCCAAGCTAACGATATACGTG 59 12082086 12082104 GTATGCCCAATAGCTTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076134 1 1 2 135 3L 11641408 11641501 GCTTTAATAGTAGTTACTGCGC 57 11641235 11641253 TCTCGTGCTTCAATGTGAG 57 NA InUTR Drosophila melanogaster 61 Muc68Ca FBgn0036181 FBtr0076140 1 1 1 60 3L 11612437 11612455 CAATCCACCACCTCATCTG 57 11612395 11612413 TGTTACCGCCATTTGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33271 FBgn0053271 FBtr0076150 3 1 1 197 3L 11570468 11570486 CTTCCTCTGCCAGTACCAC 59 11570289 11570308 CAATCACGATGGTCTTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33490 FBgn0053490 FBtr0089526 1 1 1 80 3L 11567119 11567200 AATCGCAGATACTCAAAGCC 58 11567058 11567079 CATCTTGATACCTGAAGGATCG 58 NA Drosophila melanogaster 61 CG7512 FBgn0036168 FBtr0302797 2 1 1 80 3L 11511466 11511555 AAGCAGGATAGATCCCACAG 59 11511598 11511616 ACATAATCACACTTGCGGC 58 NA Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 3 2 2 80 3L 11195966 11196052 AGACTTGGAAGAGACAAACC 57 11195905 11195923 AGAAACTGGTCGAAGAAGG 57 NA Drosophila melanogaster 61 Fad2 FBgn0029172 FBtr0076196 1 1 1 60 3L 11016720 11016738 CTAAGCAATCGGAAGACCA 57 11016760 11016780 GCACTATATTGACCCATACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32068 FBgn0052068 FBtr0113421 2 1 1 81 3L 10656661 10656762 ACTTTAAGATCAATGCGGACG 59 10656805 10656823 TCATCGTAGGTGTAGCCAC 58 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349 3 1 5 233 3L 9965485 9966199 ATTAAACAGCCAGGCTGGT 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32052 FBgn0044328 FBtr0273387 2 1 1 82 3L 9798477 9799013 CAGGAAACGGTATACATCGT 57 9799058 9799076 AAAGTCAACTGGTTGTGCT 57 NA Drosophila melanogaster 61 alphaTub67C FBgn0087040 FBtr0076393 3 1 1 193 3L 9674512 9675016 AAATGCGCGAAGTAGTCTC 58 9675172 9675191 GAAGAAGGTCCTAGCATCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076459 2 1 5 62 3L 9423884 9423902 ACTACAGCATCTACGGCAG 59 9423928 9427505 CATCCGAACTCTGTTGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491,FBtr0301773,FBtr0089490,FBtr0089492,FBtr0300290 3 5 6 116 3L 9336131 9336149 TCGATAATCGGGACAAGTG 57 9336229 9338017 GATCTTCGTGTTTGGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5644 FBgn0035948 FBtr0076556 1 1 1 82 3L 8972495 8972514 GTGAAGCGTGTAACCATCTC 59 8971724 8972450 TTCACAATGACCGTGACGA 59 NA Drosophila melanogaster 61 CG5653 FBgn0035943 FBtr0076559 1 1 1 60 3L 8958491 8958512 GCTGGAAGAGGATCTGATAGAG 59 8958452 8958470 GGTTATACCCTCCACCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arr2 FBgn0000121 FBtr0076599 3 1 1 123 3L 8640897 8640916 GCCTGTGGTATTGTCATCTC 58 8640731 8640812 TCTTCTCAATGGTTCCAGGT 58 NA Drosophila melanogaster 61 fan FBgn0028379 FBtr0076683 3 1 1 60 3L 8102629 8102650 GAAGCGTCATAAGTTCCTTCTC 59 8102670 8102689 CTGCACATCGCTTATGTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 2 4 4 85 3L 7504534 7504620 GACAATGAGCTCACCATCC 58 7504669 7504687 TGGTAGATGATACGCTGGT 57 NA Drosophila melanogaster 61 CG8562 FBgn0035779 FBtr0076854 1 1 1 80 3L 7391414 7391433 TCTCTGGGTTTGTTAGTCCT 58 7391476 7391579 CTCATAGATGCGGTAACCC 57 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301107,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106,FBtr0301958,FBtr0301110,FBtr0301108 3 11 11 95 3L 7043784 7044348 CCTCTCATCCAGGGTACAG 58 7044407 7044425 GAGTTGAAGAGCACATCGC 59 NA Drosophila melanogaster 61 CG9948 FBgn0035721 FBtr0076896 1 1 1 87 3L 6949419 6949438 TCTGGACTCTCGAACTACGA 59 6949488 6949562 AGAAGTCCACATCACAGCC 59 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 3 4 4 80 3L 6685396 6685485 CTTCGTAATAACCGGTCTTACAG 59 6685338 6685359 TATTCCGAGAAGTTTAGACCCA 58 NA Drosophila melanogaster 61 zpg FBgn0024177 FBtr0076983 1 1 1 80 3L 6598774 6598794 CTATGTGAGCGACAATGTGAC 59 6598658 6598735 ACTACCTTACTAACCGCATCTG 59 NA Drosophila melanogaster 61 Lcp65Aa FBgn0020645 FBtr0076995 3 1 1 96 3L 6144436 6144454 AAATCCATCCTTGTGCTCG 58 6144514 6144532 CATTGACATCGGACACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13295 FBgn0035674 FBtr0077065 2 1 1 96 3L 6068061 6068140 GAACCAAGATCTGACAACGG 59 6067984 6068002 GTTCTCGTTGGTGTTCCTC 58 NA Drosophila melanogaster 61 Jon65Aiv FBgn0250815 FBtr0077040 3 1 1 221 3L 6032544 6032639 TACCGATGGAGTTCAGTCC 58 6032824 6032842 AAGGTCGAGTAGGAGTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 Eaf6 FBgn0035624 FBtr0077126 2 1 1 89 3L 5601109 5601194 AAACATCGGAACAACTGGC 59 5601038 5601056 TGATGTTTCCGCACAACTG 59 NA Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 1 1 1 107 3L 5227732 5227750 CAACCGTATGAGAGGAGGA 58 5227821 5227887 TTATCCAGTCGCACCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15212 FBgn0040842 FBtr0077163 2 1 1 91 3L 5124706 5124863 GAAGTACCTAGCTCTGACCA 58 5124916 5124935 TATTATCGCCGATCAGGGAC 59 NA Drosophila melanogaster 61 CG13704 FBgn0035583 FBtr0073353 2 1 1 90 3L 4900353 4900425 ATACTTCACTGGCCTTGCT 59 4900479 4900497 GATGAAGTAGAGGGCTCCA 58 NA Drosophila melanogaster 61 CG32250 FBgn0052250 FBtr0073287 3 1 1 79 3L 4319219 4319241 CACTTTCTATCCACTGGATACAG 58 4320158 4320176 TCACTTGCCTTGTACTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33764 FBgn0053764 FBtr0091765 2 1 1 98 3L 4267160 4267244 TTAGCAAAGTAAAGGTGCGT 58 4267081 4267099 ATGTTAGGAATCTGCACGC 58 NA Drosophila melanogaster 61 CG11586 FBgn0035520 FBtr0073243 2 1 1 109 3L 4262306 4262324 AACGAGTACGAGAAGCTGG 59 4262156 4262174 AGGTCCACCTTATAGTCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15011 FBgn0035518 FBtr0073244 1 1 1 80 3L 4258377 4258399 GTGTGGTAAATCTAGTCCTAGGT 59 4258258 4258339 GCTAGAAGTTCCTTGCAAGTC 59 NA Drosophila melanogaster 61 Teh4 FBgn0035504 FBtr0301645 1 1 1 80 3L 4175923 4176021 CAGTGCTACTATAACAAGGACTC 58 4175865 4175884 TAGAAGCTCCCTGTAAACCT 57 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156,FBtr0073155 2 2 2 130 3L 3860364 3860382 TATGGTTCCAGAACTCGCG 59 3860751 3860900 ATAGAGGATTCATGAGTCGGG 58 NA InUTR Drosophila melanogaster 61 CG32846 FBgn0052846 FBtr0073009 3 1 1 87 3L 2951312 2951333 GCCTGTGGAAATATCTTATCGA 58 2951183 2951264 CCATACCAGAAGCATTGGG 58 NA Drosophila melanogaster 61 CG12187 FBgn0035367 FBtr0072945 2 1 1 101 3L 2673138 2673157 TCTTCGATGAGAACCTACCG 59 2672885 2673074 TTTCGGGTTCCGCTATGAG 59 NA Drosophila melanogaster 61 CG12182 FBgn0028504 FBtr0072955 2 1 1 82 3L 2597247 2597267 ACGAGATGCTAGGTATACCTG 58 2597134 2597204 GAGGGAGATCTCCACAAAGG 59 NA Drosophila melanogaster 61 CG32295 FBgn0260480 FBtr0072962 3 1 1 60 3L 2526054 2526074 GTATGATCGATTTGATGGAGC 57 2526014 2526032 TTATCCGGAATCGGTTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072921 3 1 3 265 3L 2488909 2488927 ATGCATTATTACCCGCTGC 58 2491126 2491144 CGTATTCCGTGTAGTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 1 4 4 80 3L 2498021 2498106 CTGGAAGATGTGAAGATAAACACC 59 2498143 2498163 TGAGATCCAGCGATTTACTCC 59 NA Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 2 2 2 60 3L 2299265 2299774 TAAAGCTGAGTGACCTTATGG 57 2299796 2299814 AGGATGAAGTTGATGCTCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42355 FBgn0259701 FBtr0299954 2 1 1 116 3L 2037954 2037972 TACAAGAAGCATCATGCCG 58 2037799 2037876 GGTTTCTTTAGGTCTCACCTC 58 NA Drosophila melanogaster 61 CG12003 FBgn0035234 FBtr0072744 1 1 1 96 3L 1565542 1565564 GGATTAAAGCGATGAGAAGATCG 60 1566224 1566242 ATTATCGTGGCTCCATGCA 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 2 1 2 155 3L 1330961 1331294 AAAGCTCAACGTTGAGTCG 58 1331410 1331431 ACGTACTTAATAATGTCGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660,FBtr0072659 2 3 3 104 3L 1269165 1272974 CTTCTTCAAGGCAAACTGGT 58 1273041 1273059 TGCTTCTCCAGTCTATCGT 57 NA Drosophila melanogaster 61 LysB FBgn0004425 FBtr0072628 1 1 1 160 3L 1207653 1207671 TCTCCTACAATGAGTGCGG 59 1207795 1207813 GAAGCAGTCATCGATGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysX FBgn0004431 FBtr0072637 2 1 1 61 3L 1194998 1195016 GATGTGAGTTGCAACGCTC 59 1194955 1194974 TTTAGGGCACATCTTACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 2 2 2 84 3L 594776 594794 TACATACGATCGGTGTCCA 57 594842 594930 TTCCTTGGAGGTTGAAGTC 57 NA Drosophila melanogaster 61 CG42377 FBgn0259744 FBtr0299980 1 1 1 80 3L 278322 278411 CAAAGTTAAGACCAAAGACCG 57 278452 278471 CTTATGTCCTCTGTGTAGGC 57 NA Drosophila melanogaster 61 miple2 FBgn0029002 FBtr0072506 1 1 1 89 3L 274227 274598 AGAAGTGCAAGAAAGGCTG 58 274649 274669 CTGGTTCCAACTTATCCTCTC 57 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 3 3 3 148 3L 224170 224977 ACTACGAAGTGAAGTCGCA 59 225089 225107 TTTCGCATAGATGGTGGCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299865 1 1 6 191 3L 171868 172078 AGTAATCACACCACAGCGA 59 172233 172251 TAGGTCTCAAACTCGCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Psi18S-841b FBgn0083018 FBtr0113520 3 1 1 90 2R 17217781 17217799 TGCAAATGCACTCTGTGTC 59 17217851 17217871 TGCATGGATAAGTCACATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:U29:54Eb FBgn0063384 FBtr0086846 1 1 1 60 2R 13587731 13587752 TGATGAAACATTTACCCAGCTC 59 13587770 13587791 CGTTGGATATGGAACAGTTCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30082 FBgn0050082 FBtr0087321 1 1 1 80 2R 11573196 11573273 CATTTGTTAACGGTTCGCC 58 11573134 11573154 ATACGTCGGAATACAGAACTC 57 NA Drosophila melanogaster 61 5SrRNA:CR33375 FBgn0053375 FBtr0086367 1 1 1 60 2R 15645592 15645610 ATACATCGGTTCTCGTCCG 59 15645550 15645568 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33680 FBgn0053680 FBtr0091660 3 1 1 102 2R 21137247 21137265 CCATTAGAACCGTTGTCCT 57 21137102 21137181 TCCCTGTATAGTTCCCTCC 57 NA Drosophila melanogaster 61 CG3770 FBgn0035085 FBtr0072393 3 1 1 83 2R 20833847 20833921 GTAGCATAGGAGTTTCATTCTACTG 59 20833959 20833980 ACTCTGCCTTTAGGCTTATACC 59 NA Drosophila melanogaster 61 key FBgn0041205 FBtr0072428 1 1 1 80 2R 20673810 20673829 GCGTATCTGAGAAACAGTCC 58 20673606 20673770 ACTCAAACGAGTGATTTAGCTG 59 NA Drosophila melanogaster 61 CG4781 FBgn0035043 FBtr0072335 2 1 1 60 2R 20529127 20529146 GGGATCTATACACCGGACTC 58 20529086 20529104 CAAGCGTCCAGTCTTAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4781 FBgn0035043 FBtr0072335 1 1 1 60 2R 20529505 20529525 AGCTACAAGGACTACAAGGTG 59 20529465 20529483 GGGAGTCGATGTACAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 2 2 2 194 2R 20487184 20487202 ATCCAGCTGAGTACAACCC 59 20486889 20486907 GGAACACGTACTTGTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 1 2 2 193 2R 20487184 20487202 ATCCAGCTGAGTACAACCC 59 20486890 20486908 GAACACGTACTTGTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ir60e FBgn0035019 FBtr0273359 3 1 1 60 2R 20418321 20418339 CTCTACAGCTACCTACCGT 57 20418279 20418298 ACTCGGACACATTTGATAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir60d FBgn0259187 FBtr0302288 3 1 1 60 2R 20408407 20408425 TTCCACAAGTCCCTTCTCC 59 20408446 20408467 AGTAATAGTACAGTCCGGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3483 FBgn0035005 FBtr0072293 1 1 1 60 2R 20333087 20333105 GCGGAAACTGAATAGCCTG 59 20333129 20333147 AGCAAACAGACGATAAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15874 FBgn0035004 FBtr0072356 2 1 1 62 2R 20320109 20320127 ACCCTCCATGTTATCAGGT 57 20320065 20320083 CTGGCCAAAGGTTCAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072368 1 1 2 80 2R 20270758 20270778 GCCTTCTGATTTAGGGTATGC 58 20269365 20270716 TTCATCGAGGTGCATCTGG 59 NA Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697,FBtr0299696 2 2 2 134 2R 19962578 19962725 CAGAGTACCTCCGAGACAC 58 19962823 19962841 GTGGAATTTGTAGCCTCCG 58 NA InUTR Drosophila melanogaster 61 CG3173 FBgn0034964 FBtr0072168 2 1 1 98 2R 19927935 19928010 GAGTTGCAGATAATAACCATGG 57 19928067 19928087 AGTTTCCTCAGTGATAACAGC 58 NA Drosophila melanogaster 61 CG4324 FBgn0034956 FBtr0072197 1 1 1 82 2R 19904165 19904245 GTGTCTATAAATCCGGATGATACC 58 19904106 19904124 GACAGCTTGACGTGAAACC 59 NA Drosophila melanogaster 61 CG30178 FBgn0050178 FBtr0072159 3 1 1 62 2R 19874305 19874323 GGGTAAGACGTACCATCCG 59 19874349 19874367 TTAGGATCAACCACCAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fzr2 FBgn0034937 FBtr0072146 2 1 1 60 2R 19838601 19838619 TCGCCCGTACAAGATACTC 59 19838640 19838661 AATAAGGTTCAGGTAGAAGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2970 FBgn0034936 FBtr0072145 1 1 1 80 2R 19837429 19837509 CATTGATCCGTACAAAGCCTC 59 19837551 19837569 GATCTCATCGTCGTCTGGG 59 NA Drosophila melanogaster 61 CG5339 FBgn0034925 FBtr0072220 2 1 1 83 2R 19785292 19785312 TTCATACTGTCCGAGGAACAG 59 19785172 19785248 CAACGTGACAGGTTCTTGAC 59 NA Drosophila melanogaster 61 PHDP FBgn0025334 FBtr0072224 3 1 1 94 2R 19771619 19771638 GTCGAGCTTATTGTTCTCCA 57 19771449 19771563 ACTTCAAATGGAAGTCCGTG 58 NA Drosophila melanogaster 61 CG30177 FBgn0050177 FBtr0072122 2 1 1 60 2R 19689186 19689207 ACATTTACTATGGAACCCTGCT 59 19689228 19689246 TGGTCATGTCCAATAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5428 FBgn0034887 FBtr0114541 1 1 1 80 2R 19570147 19570225 AGGAGTTCAGGTTCGTTCG 59 19570266 19570287 GATCGAATTCCCGTATGATGTC 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 2 5 5 81 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484835 19484916 CGAGTACATGCCTTCATGC 59 NA Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044 1 1 2 111 2R 19206711 19206729 ATTTGATTCGGGCTTCCAG 58 19206521 19206539 CAACTTGGTGGTCAATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13544 FBgn0034826 FBtr0071973 2 1 1 80 2R 19027279 19027353 AAGAACTCAAACTGCATGTCG 59 19027219 19027239 CGTCTTAACCCTTCCATTGTG 59 NA Drosophila melanogaster 61 CG9877 FBgn0034819 FBtr0071980 2 1 1 84 2R 18973716 18973734 GCTGCTATCGTGTTTGTCG 59 18973650 18973668 AGCCACCATATCCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0300176 2 1 3 77 2R 18945923 18945941 GATAGTCCGTTGGTGGAGG 59 18945981 18946078 AAAGAACACAACCTTGTGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0113365,FBtr0071921 3 2 2 100 2R 18591799 18591817 CATGGAGGAAGAGACGAGG 59 18591647 18591666 TAGCCATATTGAGTCGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG13516 FBgn0040658 FBtr0100554 2 1 1 94 2R 18557549 18557658 GTTTGGTCGGATTCTGCTG 59 18557715 18557734 GAAGGTGTTACACTTGCGAC 59 NA Drosophila melanogaster 61 CG30269 FBgn0050269 FBtr0071867 1 1 1 90 2R 18555813 18556165 CTGTTCCAGTTGTACTGCTG 58 18556218 18556236 AATAACGATCGCACATGCC 59 NA Drosophila melanogaster 61 CG4250 FBgn0034761 FBtr0071865 1 1 1 94 2R 18551368 18551500 TGATATTGCAGGCTCCACC 59 18551558 18551576 GAACTCCACCTTCGTCTCC 59 NA Drosophila melanogaster 61 ppk12 FBgn0034730 FBtr0071830 3 1 1 80 2R 18316617 18316635 ACGTTTATTTCCGGGAGTC 57 18316679 18316814 CGACGTTTGACAAGAACTC 57 NA Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112520 2 1 2 128 2R 18218158 18218179 CCAGAAATAGGATAGGAAAGGC 58 18218268 18219689 TTGTAGTTCAAAGCAGCCC 58 NA InUTR Drosophila melanogaster 61 CG9304 FBgn0034674 FBtr0071726 2 1 1 81 2R 17862183 17862204 GGGATGGATAATTCTGATGTCC 58 17862246 17862317 GACTTCCGTCCTATCCCAG 59 NA Drosophila melanogaster 61 CG4372 FBgn0034665 FBtr0071738 3 1 1 60 2R 17726144 17726167 CCAAGAAGACAGAGATTCAATCAC 59 17726107 17726128 AAATTGGCATCCGTATAGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 3 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG33225 FBgn0053225 FBtr0300405 3 1 1 93 2R 17478421 17478440 ATTATCCATGGCCAATTCGG 58 17478495 17478570 TGACGTAGTCTGAGATCGAC 58 NA Drosophila melanogaster 61 CG10440 FBgn0034636 FBtr0071692 3 1 1 84 2R 17449353 17449371 AGACTTCTGATTGCCGAGG 59 17449085 17449305 GCTTAATCATCGGCTCCAC 58 NA Drosophila melanogaster 61 CG10795 FBgn0034626 FBtr0071609 2 1 1 151 2R 17271527 17271546 AAATCGATCCCAAGACACAG 58 17271330 17271413 GTGATAGCCATTCGTCCAC 58 NA Drosophila melanogaster 61 CG33655 FBgn0250824 FBtr0300632 2 1 1 77 2R 17207399 17207417 GATCTAACATGCGAGGCAG 58 17207279 17207299 TGCTTTCGATTTACCATCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9752 FBgn0034614 FBtr0071616 2 1 1 69 2R 17182794 17182812 CTTTGTGTTGGACACCCTG 59 17182687 17182707 GCCATCGACCTTATATTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG30390 FBgn0050390 FBtr0071617 3 1 1 126 2R 17180763 17180836 AACAGATTCAGGATCGCCT 58 17180655 17180674 TTAACCTTCTGATTGGTGGC 58 NA Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 1 2 2 80 2R 17103409 17103491 CTTCTACTGTGATCAGCACCT 59 17103349 17103370 GTAATCGATTGGAAGTGCAGAC 59 NA Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 1 1 1 60 2R 16948710 16948788 AAATCAAACCGGATTCGGA 57 16948811 16948830 ACTATGCCTTCCGTATTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 grau FBgn0001133 FBtr0071548 3 1 1 91 2R 16898310 16898393 AGTACATCAAATGCAAGGACTG 59 16898240 16898258 CTCCTCGTCTGGAACATGG 59 NA Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0071519 3 1 2 227 2R 16831644 16832349 CTCTGGTCGTTGACAATGG 58 16832539 16832558 CCATATCATCCCAGTTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13436 FBgn0034532 FBtr0086229 2 1 1 80 2R 16525006 16525084 CGGAGCTTATATTTCCGCAC 59 16525126 16525145 ACTCAACAATGTGGTTCAGG 58 NA Drosophila melanogaster 61 Mgat1 FBgn0034521 FBtr0086259 1 1 1 80 2R 16447789 16447868 AACCTGATTAGAATCGAAGGTC 58 16447730 16447748 ACCCAGCATCTTAGTTGTC 57 NA Drosophila melanogaster 61 CG9975 FBgn0034435 FBtr0086518 1 1 1 80 2R 15231205 15231294 GGTGTTCTATGACGATTCGC 59 15231336 15231355 CAATTGTAGGTGGAGTTGGC 59 NA Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504,FBtr0086503 3 2 2 80 2R 15104011 15104253 CATAACCGCAATCGAACTGG 59 15104295 15104314 TTCGACATCAGGAATAGGGC 59 NA Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086581,FBtr0086580 2 2 2 105 2R 15024950 15024969 AATCGCATTAATTGCTCCAG 57 15025037 15025336 AGAAGCATGATGACCACTC 57 NA InUTR Drosophila melanogaster 61 CG17821 FBgn0034383 FBtr0086642 3 1 1 128 2R 14631983 14632006 CCATGTTGATCTACAACTTCTGTC 59 14631810 14631828 CTGGATGATCCGAGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17821 FBgn0034383 FBtr0086642 1 1 1 123 2R 14632192 14632210 GATTTATTCCGAGGGCTGC 58 14632037 14632055 TCATGAAATCGGGTCCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS28 FBgn0034361 FBtr0301637 1 1 1 80 2R 14502097 14502177 TAATTGATCTGGACAACGCC 58 14502036 14502057 AGTCTATGTAGAGATCATCGCC 59 NA Drosophila melanogaster 61 CG16836 FBgn0040735 FBtr0086666 2 1 1 80 2R 14276655 14276739 GGCAGCTGTTAATGCTACG 59 14276783 14276801 CCCGGATCATTATCAGGCT 59 NA Drosophila melanogaster 61 dpr13 FBgn0034286 FBtr0300215 3 1 1 80 2R 13865172 13865192 CTTCTGGTATCACGATAACCG 58 13865039 13865130 GATTGAAAGTCCGGTTCCG 58 NA Drosophila melanogaster 61 CG5009 FBgn0027572 FBtr0089548 1 1 1 80 2R 13649722 13649741 CAAAGCCTGCATCATAGGAG 58 13649782 13649856 AGCAGAGCATTGTAAGTATCC 58 NA Drosophila melanogaster 61 Ir54a FBgn0034272 FBtr0086865 2 1 1 60 2R 13632913 13632933 CTTGAGGAATGGAAGGAACAC 59 13632952 13632973 CAAATTCCAATACAGTCGGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inaC FBgn0004784 FBtr0087047 1 1 1 80 2R 12788661 12788679 TCTTCCGGAATGTGGACTG 59 12788720 12788802 CCTTGCGATGTTTAATCATTGG 58 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147 2 1 5 81 2R 12225862 12225882 TCACAAATCCACAAAGTTCCG 59 12225922 12226968 CTATTTAATCCTGAGCTCTGCG 59 NA InUTR Drosophila melanogaster 61 CG9068 FBgn0034106 FBtr0087138 3 1 1 80 2R 12173669 12173690 GCTACTACAGTCATGTAGTGGA 59 12173731 12173813 ATTCCGCAGACATTTCGTC 58 NA Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231 2 1 2 191 2R 12025934 12026281 AAACTTCCAGCTATCCACGA 59 12027880 12027898 ATGCTGATTTCCGTCTTGC 58 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 1 5 5 96 2R 11826473 11826549 GAACGCTGATATTGGTGGC 59 11826395 11826413 CTGGTAGATCTGAGGACGC 59 NA Drosophila melanogaster 61 CG33463 FBgn0053463 FBtr0087301 2 1 1 85 2R 11783722 11783794 AATGCTAAGGTTAATGGAGCAC 59 11783658 11783676 AGCTTGCAACAATCCACTG 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 1 3 3 95 2R 11587254 11587278 CTTTCCTTATATCGAAAGATCTCGC 59 11587114 11587206 CTCGAGGAATCTAACATATTGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8180 FBgn0034021 FBtr0087359 3 1 1 102 2R 11363521 11363539 GACAACTGACTCCTCGGAG 59 11361602 11363458 CGAGCTAAATATGTTCAGAGGG 58 NA Drosophila melanogaster 61 CG33467 FBgn0053467 FBtr0089861 3 1 1 133 2R 10943416 10943490 AACCCAACAATTCGAGTGC 59 10943301 10943319 CAAACCATGACGGCATAGG 59 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 2 3 3 104 2R 10865420 10865744 CTCATTAAGGTTCGCCAGC 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0289934 1 1 4 81 2R 10641389 10641470 AGAGACACATGACATCAATGAG 58 10641329 10641347 CGATTGTGTTGGATCTCGT 58 NA Drosophila melanogaster 61 CG17386 FBgn0033936 FBtr0087488 3 1 1 60 2R 10308988 10309006 GATGAATCGTCGGAAGAGG 57 10309028 10309048 CTATGATGTGATTGTCCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 3 3 3 159 2R 10116657 10116675 TCTTCGGTATCTGCATTGC 58 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 CG30484 FBgn0050484 FBtr0087639 3 1 1 60 2R 9735594 9735615 ACAAGTAATTCGTTCTGGATGG 58 9735634 9735654 GATTCTCATAAAGCGAAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13337 FBgn0033863 FBtr0087626 3 1 1 60 2R 9553716 9553734 TGTGGCTGCCATAGAAGAC 59 9553758 9553776 CACCATCTTACGGCATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4688 FBgn0033817 FBtr0087744 2 1 1 76 2R 9127903 9127922 TATCATGGAGCGTTACCTGG 59 9128053 9128071 TCACGATGGATAAGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4679 FBgn0033816 FBtr0087759 1 1 1 80 2R 9126556 9126576 TATGCCATGTCAAAGGAATCG 58 9126442 9126516 CTCTTGGTGCATAAACAGCTC 59 NA Drosophila melanogaster 61 CG4676 FBgn0033815 FBtr0087743 2 1 1 80 2R 9123746 9123817 ACACTAGTATCCGCAAGGAG 59 9123860 9123878 GACAATCCTGGCAAGAGTG 58 NA Drosophila melanogaster 61 CG33798 FBgn0053798 FBtr0091802 2 1 1 81 2R 8881825 8881846 CGTTACTAAGTTCATCTTCGGT 58 8881883 8881977 CATAATTATGTCATGGTCGTAGGG 59 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087800 1 1 3 104 2R 8837581 8839685 CACAATGGCCTACAAGTGG 58 8837495 8837513 CTGCCCACGTATATCATGG 57 NA InUTR Drosophila melanogaster 61 CG30053 FBgn0050053 FBtr0087873 3 1 1 88 2R 8576934 8577009 GAAGGTTTGGAGGGAATAGG 57 8576865 8576883 ATAATCACTGGTTGCCCAC 57 NA Drosophila melanogaster 61 CG33632 FBgn0053632 FBtr0091609 1 1 1 80 2R 8410020 8410093 CCTTATAACCATGATCTTGTGC 57 8410133 8410152 CGGAAAGGGTAGTATTTCGG 58 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942,FBtr0087943 1 2 2 80 2R 8399929 8400013 GCGTGACGTGAATCAACAG 59 8399867 8399888 GGATCGATTGTCTGGATTTCTG 59 NA Nonspecific Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087933 2 1 2 175 2R 8341396 8341414 CGAAGTGAAGCTATCGGTG 58 8341553 8351856 AGGTGGCACTATCAGTTGG 59 NA Drosophila melanogaster 61 Cpr49Ah FBgn0033731 FBtr0087924 3 1 1 108 2R 8301570 8301810 AAAGTGCTCATACTTCTTGTGC 59 8301879 8301897 GATCTGGTTTGTCATCGCG 59 NA Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 3 1 1 77 2R 8079341 8079361 CCGCATGTGGATTTCATAGTG 59 8079400 8079479 AAACCTTTCATCGCGATGG 58 NA DesignNoJunction Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 1 2 2 228 2R 7413964 7413982 AATGGAGTCCTCGGATGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG30026 FBgn0050026 FBtr0300922 1 1 1 105 2R 7296448 7296466 CCGTTTCTTCCACAAACCC 59 7296308 7296382 CAACCCACTCCATAACAATCAC 59 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 1 4 4 80 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269385 7269466 ACCGTGATCAACCTTATCG 57 NA Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0300862 3 1 2 86 2R 6829104 6829201 CGAATGGGTATTTCTGATCATCTG 59 6829041 6829059 AAGACTATGGGACTGGCAC 59 NA InUTR Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 1 4 4 105 2R 6730655 6730673 GTCATCGTCTTTCCCATGC 59 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 CG12935 FBgn0033547 FBtr0088221 3 1 1 99 2R 6697686 6697769 CTTTCTGATAGGATATGGCATACTG 59 6697826 6697844 AAAGGAAACGCTCTGACCA 59 NA Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088356 1 1 2 80 2R 6242936 6243016 GATCTTCTTAGTCGAGTCGG 57 6242875 6242896 TAAACACTGAGCTATGTCAGAG 57 NA InUTR Drosophila melanogaster 61 CG12907 FBgn0250840 FBtr0088351 1 1 1 71 2R 6241505 6241526 CAAGTGCATTATATGGCATACC 57 6241625 6241645 CCAGTTAAATATCCCATCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL42 FBgn0033480 FBtr0088403 2 1 1 61 2R 5954525 5954543 GGTTAAGGAATCGGCTCTG 58 5954568 5954586 CCACTTCTGGATGTTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34220 FBgn0085249 FBtr0112413 2 1 1 86 2R 5930865 5930940 TCGATGAATCTGTCAAGCCT 59 5930798 5930816 GGGCCTGTTTATTCTGTGG 58 NA InUTR Drosophila melanogaster 61 Lsm11 FBgn0033450 FBtr0088485 1 1 1 60 2R 5726624 5726645 GCTGTAGATATTCTACCTCCTG 57 5726585 5726604 TACTAGTGGTAGGCATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 prel FBgn0033413 FBtr0300293 2 1 1 85 2R 5311890 5311910 TAATTGGTGCCAATCACACTG 59 5311957 5312053 TGTCCCTGATCTTTGCGAG 59 NA InUTR Drosophila melanogaster 61 CG34350 FBgn0085379 FBtr0112560 3 1 1 81 2R 4885423 4888896 AGCACAGTTCCAATCTGGT 59 4885360 4885379 GAACATACAGATGCCAGAGC 58 NA Drosophila melanogaster 61 CG13745 FBgn0033354 FBtr0088675 1 1 1 80 2R 4823088 4823108 GACCAAGCACTACATATCGAG 58 4822969 4823049 CGTAGCAGAAGTTCAAATTTGG 58 NA Drosophila melanogaster 61 Cyp4e1 FBgn0015034 FBtr0088746 2 1 1 124 2R 4336526 4336546 CACGTTTCAGGAGATATCCAC 58 4336629 4336704 TGTCACCATCAATTACGTAGTC 58 NA Drosophila melanogaster 61 boly FBgn0050362 FBtr0088769 1 1 1 60 2R 4253436 4253454 AAATTCATCGACGGAGCCT 59 4253394 4253412 CCTTTGGAGCAAACCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2291 FBgn0033279 FBtr0088802 3 1 1 60 2R 4148558 4148577 GAAGAAGATCGACGAAGTCC 58 4148517 4148537 ATGATGGTACTCTGGATTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 drosha FBgn0026722 FBtr0088850 2 1 1 92 2R 3823912 3823994 CAAGAGTCCAACAATGCCC 59 3824050 3824068 TTCGGAGAAGAGGTTGAGC 59 NA Drosophila melanogaster 61 CG30496 FBgn0050496 FBtr0088926 1 1 1 60 2R 3588770 3588790 CATTACAAGGCGTACAAGGAG 59 3588810 3588830 TTAGTTCATCATCCGAAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn43Aa FBgn0024294 FBtr0089041 2 1 1 95 2R 3036191 3036392 TTGCATAAGATGGGAATCAGTG 58 3036448 3036466 CACCTTTGTGATCCGAGTG 58 NA Drosophila melanogaster 61 CG33914 FBgn0053914 FBtr0091918 3 1 1 93 2R 2925045 2925123 CTAACAGAGTTGCATGGAGTC 58 2924972 2924990 TAACCGCACAGTACTCCAC 59 NA Drosophila melanogaster 61 CG15909 FBgn0033090 FBtr0086122 1 1 1 80 2R 2570746 2570827 GCGATTTGTTCTATGGTATGTC 57 2570868 2570886 GCTGTGAGTCTTGACTTGG 58 NA Drosophila melanogaster 61 CG7881 FBgn0033048 FBtr0086033 2 1 1 82 2R 1849516 1849534 ATAGTGAATGGCATTGGCA 57 1849199 1849470 CTTCGTGAGTCCGATTCAG 58 NA Drosophila melanogaster 61 dpr12 FBgn0085414 FBtr0300553 3 1 1 80 2R 1745079 1745963 TTCGAAAGGCGACAATATGG 58 1746004 1746024 ATCGACCTAAATATGTGCGTC 58 NA Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 2 2 2 92 2R 1249044 1249113 TGACGAAGATGGTAATGAGGA 58 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 2 1 1 64 2L 1789271 1789353 GTATATCAGACTTTGCCTTGTACTG 59 1789231 1789250 AAATAGTCCGCAGTGAAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15219 FBgn0040519 FBtr0085944 1 1 1 94 2L 22105056 22105123 GGGCTTTACTCTCCAATGGA 59 22104981 22104999 TAAGCTTGACCTTCTGGGC 59 NA Drosophila melanogaster 61 CG42597 FBgn0260996 FBtr0301799 3 1 1 60 2L 22064776 22064794 ATTACAAATCGACCGGCCA 59 22064734 22064755 GTGTGATGATTCTCCAAGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11634 FBgn0032968 FBtr0085930 2 1 1 60 2L 21917027 21917047 TTTGGAACGAAACGCTAACTG 59 21917069 21917087 AAATAGGACGAGCTGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085907 1 1 2 85 2L 21832187 21833384 AATTATAAAGCTCTGCCCACAG 58 21833430 21833448 GAGTTTGAGTCGTGTGACG 58 NA InUTR Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 2 13 13 80 2L 21289506 21289525 TTTATACAGCCCAGTCTTGG 57 21289388 21289464 TGTGGTTGGAATCAAGTCTG 58 NA Drosophila melanogaster 61 Mtp FBgn0032904 FBtr0081439 1 1 1 82 2L 20920333 20920352 GCTTTGTTCAAATCGGAGCT 59 20920211 20920288 AGGACTGTCGTAAGACCCT 59 NA Drosophila melanogaster 61 Spn3 FBgn0028986 FBtr0081450 2 1 1 104 2L 20837900 20837973 TGAAGTATTTGTGCCTGCT 57 20837814 20837833 TAATGAGATTCTTGTCGGCA 57 NA Drosophila melanogaster 61 CG34007 FBgn0054007 FBtr0100062 3 1 1 106 2L 20495229 20495306 CAAATACGTGCTGCCTACAG 59 20495375 20495393 AAGCAGGCAACATAAGGGA 59 NA Drosophila melanogaster 61 CG40174 FBgn0058174 FBtr0100564 2 1 1 128 2L 20258194 20258212 AGAAGAACATGAGACCCGC 59 20257980 20258102 CAAACGATGGCGAAATCCT 58 NA Drosophila melanogaster 61 CG40341 FBgn0259996 FBtr0302056 3 1 1 196 2L 20248239 20248258 CAACAGACAAGAACAACGAC 57 20248416 20248515 AAAGTCAGTAAGCGACTTGG 58 NA Drosophila melanogaster 61 Taf13 FBgn0032847 FBtr0081340 1 1 1 80 2L 20093243 20093333 GAGATCAAGTATGTGGGCAC 58 20093182 20093202 TTGGCTTATACCTGGATTTGG 58 NA InUTR Drosophila melanogaster 61 CG10730 FBgn0032843 FBtr0081346 1 1 1 80 2L 20071696 20071835 CAATGCCTATAATCAGCTAAGAAGG 59 20071640 20071659 CTGGTGATCATGTAGTCGGT 59 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081328,FBtr0081329 2 3 3 92 2L 20063605 20063682 TTTACTTGCCTGAGTGGCA 59 20063738 20063756 GTGTCCATACGCGAATCTG 58 NA Drosophila melanogaster 61 Hf FBgn0014000 FBtr0081306 1 1 1 180 2L 19967503 19967584 TTATCTGTCTGGCTCTGGC 59 19967341 19967359 AAGTACTGCCGATCGATGG 59 NA Drosophila melanogaster 61 CG13958 FBgn0032825 FBtr0081295 1 1 1 60 2L 19828092 19828116 GCCAGAAGTAATATACGATAACGAG 59 19828128 19828152 AGTCTCTATGATAATAGTCTCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 2 2 2 80 2L 19729961 19729979 TACTGGACGTCTTCCAGAC 58 19730021 19730109 AGAAGTGGTATTGATCCTCGG 59 NA Drosophila melanogaster 61 Top3alpha FBgn0040268 FBtr0081246 3 1 1 101 2L 19499001 19499019 ATGGAAGCTGCCAAATTCC 58 19499082 19499154 TGTGCAGAACCTTAATCTTCC 58 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 3 2 4 80 2L 19387915 19387933 TATAACTGGTCTGGCCACG 59 19387761 19387872 TGGATGCGAATATCGTTGTC 58 NA Drosophila melanogaster 61 robl37BC FBgn0028569 FBtr0081139 3 1 1 264 2L 19011009 19011027 CTGTGCAGATGACCTTCGA 59 19011254 19011273 ATCAGAATGATCGTGTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp36DE FBgn0011559 FBtr0081054 3 1 1 80 2L 18358857 18358877 TATTTGGAGTAAACCCACAGC 58 18358738 18358817 GAATCACTTGTGAAGACTCGG 59 NA Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 2 2 2 100 2L 17479236 17479256 TGTATTGAGTATGCACAGGGA 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0080922 2 1 2 259 2L 16870996 16877514 TGAAGCTGACATCCTAAAGG 57 16877733 16877754 GCAGAGTATCCTTATGGAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0302189,FBtr0080922 1 2 2 258 2L 16870997 16877515 GAAGCTGACATCCTAAAGGA 57 16877733 16877754 GCAGAGTATCCTTATGGAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13272 FBgn0086673 FBtr0080914 2 1 1 142 2L 16811806 16811824 ACTTTGGAGACGATTGGCA 59 16813530 16813548 TAGTCGTAGGTGGGATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17996 FBgn0032595 FBtr0080937 1 1 1 66 2L 16730942 16730960 ATGAGCCTTGAACAACAGC 58 16730841 16730912 TATCATTTGGATCGCCCAG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5869 FBgn0028894 FBtr0080851 1 1 1 80 2L 16302312 16302331 AAATGGTCCATGACGATCAG 58 16302196 16302270 GCAATTCGATCTGGCTATCC 59 NA Drosophila melanogaster 61 EndoGI FBgn0028515 FBtr0080824 2 1 1 88 2L 16258172 16258261 TAGCACAGAACGATTACACCA 59 16258311 16258329 GATTTCGTCTACCTGCACG 58 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 1 3 3 82 2L 15958577 15958709 GACTCGAGCATATGTCTGG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 GABA-B-R1 FBgn0260446 FBtr0080697 3 1 1 80 2L 15025513 15025624 AATCTAATTGTGCTCTGCTACG 59 15025665 15025683 ATGGGTGCGGAATAGAGTG 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 2 5 5 80 2L 14323471 14323547 CAGAAGCGATCGATGTTTCC 59 14323590 14323608 TACTCAAACCGTAGGAGGC 58 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 2 5 5 80 2L 14195780 14195800 AATGTCATACACATGCTCGAC 58 14189221 14195741 GTACAGGTTCAAGCTCATTAGC 59 NA Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 2 1 1 191 2L 14043091 14043110 CATAATGAGCGTAAGGTGGC 59 14040821 14042937 ATCCTTGGCACGACTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 3 2 2 87 2L 13794621 13794909 CATATCAGCTGCCTACAATGAG 59 13794957 13794975 CGAGGAGTAGTCGTTTCCA 58 NA Drosophila melanogaster 61 CG33644 FBgn0053644 FBtr0091621 2 1 1 112 2L 13532346 13532364 AAGTTGATTGCCGATGAGC 59 13532512 13532533 GGTATAACCTTTGGATTGATGG 57 NA DesignNoJunction Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 2 1 1 70 2L 13436779 13437925 TGACTAACTTGTCGAGCAC 57 13437959 13437977 CGAGTTCTTGTTCAGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7099 FBgn0032517 FBtr0080499 1 1 1 80 2L 13387658 13387678 CCTGGATTAATGCCATCTACG 59 13387718 13387796 CCAGAAGATCCCAGAGATAGG 59 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 1 4 4 83 2L 13209527 13209545 TCAGTTCTTGCCGACTACC 59 13209589 13209670 GCCACATAAACAATCTTATCGC 58 NA Drosophila melanogaster 61 Tor FBgn0021796 FBtr0080422 3 1 1 92 2L 13011610 13011628 AGATCTCGAACTGGCAGTG 59 13011681 13011776 GAAGTAATCACCTGAAGGTTGG 59 NA Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 1 1 1 60 2L 12427508 12427527 AGAACTACTCCCTGAACAGC 59 12427386 12427485 ACGTATATGGTCAGCTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG6405 FBgn0032428 FBtr0080366 2 1 1 85 2L 12425214 12425232 CTGAAGAGCTTCACCAACG 58 12425279 12425353 TCGTTGACAATCTTGTGTTCC 59 NA Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343,FBtr0080342 2 2 2 228 2L 12173088 12173108 TATATCCTATTCGCCATCGTG 57 12173376 12173394 GAAAGTAGCGCCATTCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6785 FBgn0032399 FBtr0080307 2 1 1 81 2L 12042378 12042396 CTCCAGTCGCTACTCATCC 59 12042223 12042334 GGATAAGGCGATCTGCTAGG 59 NA Drosophila melanogaster 61 Cry FBgn0005664 FBtr0080281 1 1 1 85 2L 11944236 11944998 TGAAACGGACATACTTGTTGC 59 11945043 11945063 GTTAAGATCGATTGGACGCAG 59 NA Drosophila melanogaster 61 Csl4 FBgn0032346 FBtr0080226 2 1 1 151 2L 11123435 11123453 TGAGACTGTAGTCTGCCTG 58 11123248 11123320 CCACCTGGCATTTATCACC 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169 2 1 4 84 2L 10969008 10969026 CACCCTATAACCACCTGCC 59 10968877 10968965 GGACTGTTGATATAGTGTTGAAGC 59 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301005,FBtr0301006 1 3 3 80 2L 10581309 10581327 GCATGAACACAACTCAAGG 57 10581192 10581267 GCAGCCAGTATTTCATATCAG 57 NA Drosophila melanogaster 61 Trim9 FBgn0051721 FBtr0080096 2 1 1 80 2L 10622768 10622788 CCACCAAATCACTCTTTCGTC 59 10622826 10623139 GCAGTAGACTTCCCTAAATTCAC 59 NA Drosophila melanogaster 61 Trim9 FBgn0051721 FBtr0080096 1 1 1 80 2L 10622768 10622787 CCACCAAATCACTCTTTCGT 58 10622826 10623139 GCAGTAGACTTCCCTAAATTCAC 59 NA Drosophila melanogaster 61 RnrL FBgn0011703 FBtr0080059 1 1 1 86 2L 10327441 10327694 TTGATCCTGTTACTATCACCCT 58 10327376 10327394 TTTCTGCTGCCAAGTTGTC 59 NA Drosophila melanogaster 61 CG4968 FBgn0032214 FBtr0079987 2 1 1 80 2L 10307486 10307569 ACGAAACGTTCATGGAAGTC 59 10307612 10307630 TGTGCAACTCATCTTGGAC 58 NA Drosophila melanogaster 61 Hand FBgn0032209 FBtr0080073 1 1 1 80 2L 10295262 10295280 CCTTGACGTGCGAATACTC 58 10295051 10295219 TTTCGGAGTGTTTCATGTCG 58 NA Drosophila melanogaster 61 CG4957 FBgn0032205 FBtr0079985 1 1 1 80 2L 10269483 10269504 CCAATGATGCTATAGAGTTGGG 59 10269543 10269625 GACTGCATAGGAAATTGACGG 60 NA Drosophila melanogaster 61 CG31710 FBgn0051710 FBtr0079849 1 1 1 60 2L 9703278 9703298 AGAATCAGTGCAATGAACAGC 59 9703149 9703167 GACTGGGCTTTATCTCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 scat FBgn0011232 FBtr0079809 1 1 1 114 2L 9431891 9432288 GACTTCGTCAATCACCTGC 58 9432366 9432384 GATCTGAGACTCCGTCCAG 59 NA Drosophila melanogaster 61 PrBP FBgn0032059 FBtr0079750 2 1 1 60 2L 8685391 8685409 CCAGTTTCTACGACAACGA 57 8685349 8685368 TAAATGTAGTACAGGCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9287 FBgn0032057 FBtr0079753 2 1 1 82 2L 8677655 8677676 TGACCCACGATTTCTTTAATCG 59 8677448 8677612 GCCAGCAACATCGATTAGC 59 NA Drosophila melanogaster 61 U26 FBgn0027780 FBtr0089673 3 1 1 80 2L 8447964 8447986 GGCACATTGTTCTATAGTGAGAG 59 8447855 8447926 TCTGGTGATTAAACCCAAGCT 59 NA Drosophila melanogaster 61 CG13385 FBgn0032039 FBtr0079660 2 1 1 60 2L 8397039 8397058 CAGCATAAACCAACCTCCAC 59 8397080 8397099 GGGCATAATACGGTCTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 3 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 1 2 2 80 2L 7988311 7988400 GGTATTACCTTGTATGAGAATGTCC 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 CG7191 FBgn0031945 FBtr0079485 3 1 1 178 2L 7771595 7773076 TCCCGGCGATGAATTACTC 59 7773218 7773236 TGAGCAAAGCGGATTTGTC 59 NA Drosophila melanogaster 61 Gr28a FBgn0041247 FBtr0079463 2 1 1 90 2L 7453312 7453548 TTAAACGAAATCCTGCAGGA 57 7453241 7453259 TGTGATTGACAACCGAGTG 58 NA Drosophila melanogaster 61 xl6 FBgn0028554 FBtr0079368 2 1 1 189 2L 6919682 6919700 AAAGTATGCTAGGTCCGGC 59 6915388 6919529 GAATGAGTTGCTTCTGCGT 58 NA Drosophila melanogaster 61 Fbw5 FBgn0031773 FBtr0079215 3 1 1 80 2L 6065357 6065375 CAAGTGCTGCATGTAAGCT 58 6065242 6065318 GTTCCAGATTATCACATATCCGTC 59 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 1 2 2 62 2L 5892729 5892808 CTCCTGCATTTGCCTTTGG 59 5892685 5892709 GAACTAGACTGAACGCTTATAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9029 FBgn0031746 FBtr0079143 2 1 1 243 2L 5886052 5886135 TGTGGCAACATTTGTGGTG 59 5886341 5886360 GTCTTGCTTATTGGCTTCCA 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4230 FBgn0031683 FBtr0079019 1 1 1 82 2L 5097578 5097598 GGCTTTGAGAGCAAGATTCTG 59 5097642 5097718 GCATAGATCTCGCCATCCA 59 NA Drosophila melanogaster 61 CG42523 FBgn0260428 FBtr0300851 1 1 1 60 2L 4763452 4763470 ACCCAAACGATTGTCAGTC 58 4763491 4763512 CAAATGGTGCAAGTTTATCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bsg25A FBgn0000227 FBtr0077423 3 1 1 80 2L 4684303 4684379 AGCACAATGATTAACCGCC 58 4684241 4684260 AGACAACTGAACTGTCTCGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG3513 FBgn0031559 FBtr0077549 2 1 1 164 2L 3693144 3693162 TATATCGGCTTTGTCGCCA 59 3692937 3692955 GGAGGCATCATAGGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 odd FBgn0002985 FBtr0077557 1 1 1 278 2L 3606086 3606293 AGAACAAGACTTTGCTGAAGAG 59 3605829 3605847 ACTGGATACTGCTGTGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2774 FBgn0031534 FBtr0077517 1 1 1 85 2L 3450281 3450368 GCCTACAAGGTAACGACCA 59 3450417 3450435 CCAAGGAAATCGCTGAAGC 59 NA Drosophila melanogaster 61 CG33281 FBgn0053281 FBtr0077584 2 1 1 93 2L 3326282 3326303 AATAATGCCGCAGAAGATAAGG 59 3326357 3326442 AACCGGCATCAACTTTACG 58 NA Drosophila melanogaster 61 gammaTub23C FBgn0260639 FBtr0077641 1 1 1 93 2L 2973284 2973302 CGACGACCACTACATACCC 59 2973356 2973437 ATTGTAGAGCTTGGAGTAGACC 59 NA Drosophila melanogaster 61 CG18558 FBgn0031469 FBtr0273251 2 1 1 116 2L 2843695 2843765 ATAATCATAGCTGGGAGAGCT 58 2843599 2843617 TTAGGTGGCCATAAGGACG 59 NA Drosophila melanogaster 61 CG9961 FBgn0031451 FBtr0077740 1 1 1 150 2L 2744880 2744898 CCAAAGAGCTCAAACTCGA 57 2744694 2744769 GGGTACATTAAAGTCCACTCTC 58 NA Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 3 1 1 116 2L 2695978 2696055 CAAACCCTTCTACTGCTTGG 58 2695881 2695899 CGATAGACGAACAAGGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG16995 FBgn0031412 FBtr0077758 2 1 1 80 2L 2308029 2308147 GAGCGCTCAACAATTTGAG 57 2308191 2308209 AAAGTCAAGGGTTGAGCAC 58 NA Drosophila melanogaster 61 CG33124 FBgn0053124 FBtr0300181 2 1 1 80 2L 2208657 2208678 AAGATGAACGAGTATCTGATGG 57 2208538 2208618 CGAAATGAAACTCGCTATCAG 57 NA Drosophila melanogaster 61 CG11723 FBgn0031391 FBtr0077852 1 1 1 82 2L 2146804 2146894 AGCAGGATGTCTCGATCTG 59 2146740 2146758 TTTCTGCTGTATCTTGCGC 58 NA Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0100503,FBtr0077866 2 2 2 98 2L 1992112 1992130 TACTTCTGCTTGGCCTCTC 59 1991979 1992003 CCTTCTTCCTATGAACATTGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 2 2 2 85 2L 1855724 1855745 GTCCCATTGAATTGCATAATGC 59 1855791 1856441 ACAAATGGTGACCACAACG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-1192d FBgn0082998 FBtr0113563 1 1 1 78 X 17038031 17038052 GGACCAGATTAATTTCCATCCT 58 17037974 17037993 CCTTTACGTTTCTCATGTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 3 2 2 81 X 20947145 20947169 GATACTAAAGAAGAGTGTGGATGTG 59 20947207 20948008 TAAAGGAACATGCTCGTCCT 59 NA Drosophila melanogaster 61 sog FBgn0003463 FBtr0074063 2 1 1 126 X 15507290 15507308 GATGATCCCATCTCGTTGC 58 15501831 15502018 CAGCGTAATGTTTCATGTTGC 59 NA Drosophila melanogaster 61 C901 FBgn0021742 FBtr0073400 2 1 1 81 X 10860495 10860513 GCCTATAGACGCAACTTCG 58 10860366 10860450 GTGATTTCTCACAGGCTCG 58 NA Drosophila melanogaster 61 CG32727 FBgn0052727 FBtr0071056 2 1 1 104 X 7301527 7301604 GCTTTCAGAAACGGATGTC 57 7301672 7301690 TTCGATCCGGATGTTTAGC 57 NA Drosophila melanogaster 61 CG5265 FBgn0038486 FBtr0083407 2 1 1 60 3R 12965408 12965427 ATACCGAGAAGGTTTACCGA 58 12965447 12965468 TAACCACCACATAATCAGAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst87F FBgn0002862 FBtr0082884 2 1 1 199 3R 9653356 9653374 TATTTGTCCTTTCGGCCTG 57 9653085 9653103 GACATTCGGTCCATAGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 1 2 2 82 3R 5121254 5121408 GAAATTTGGGAGACACAAACG 58 5121192 5121210 AACAGGATGACGGAGTAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 1 2 2 80 3R 1369137 1369156 CACGTCTAATCGAGTTGTGG 58 1369006 1369096 TTCCAATAAAGCCCGTATCTG 58 NA Drosophila melanogaster 61 CG10688 FBgn0036300 FBtr0075961 2 1 1 60 3L 12528207 12528225 CGAGTACGACATTGAGCAC 58 12528249 12528267 AAACTCCTGCTTCAGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13532 FBgn0034788 FBtr0071899 3 1 1 105 2R 18760892 18760989 TCTGTCATGTTTGACACCCA 59 18761057 18761075 GATCTCTAGGAATGCGGGT 58 NA Drosophila melanogaster 61 CG18537 FBgn0034323 FBtr0086759 2 1 1 117 2R 14183719 14183800 GAGGAGACAATGGTGGAGG 59 14183879 14183899 AGTAGGAGTTGAGGTAGTCGT 59 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0086822,FBtr0113091,FBtr0086823 3 4 4 83 2R 13755981 13756003 CTACTCAAGTGGATAATTACCGC 59 13755858 13755939 CGTCGTTGCAATCAAATCCA 59 NA Drosophila melanogaster 61 CG34228 FBgn0085257 FBtr0112421 1 1 1 100 2R 7539486 7539504 GTTTACATCACGTTGCCCA 58 7539566 7539654 TGTATGGATGGACTGTATGGG 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 1 2 2 80 2R 5051522 5051600 TTCGATCTTACAGGATGATTGC 58 5051463 5051482 ATGCATAACCAGAACCAAGG 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088837 3 1 4 205 2R 3700676 3700694 CATGGATGACATAGCCAGC 58 3700944 3700964 CTGATGGTCCAGATCTTATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 1 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific Drosophila melanogaster 61 CG15429 FBgn0031596 FBtr0077428 3 1 1 88 2L 4353122 4353140 GCTGGGTGATCATACACAG 58 4353192 4353264 CAAATAGTCCAGTGTGCGA 57 NA Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 3 1 1 282 2L 3469211 3469230 TATTCTTCACCGGTTCAGCA 59 3468896 3468967 TTCTCAAAGAACTGTCCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Ir21a FBgn0031209 FBtr0113008 2 1 1 96 2L 23062 23081 ATAGCATTCGTAACGTTGCC 59 22927 23003 CACCATTGTTCAGGGTTCC 58 NA Drosophila melanogaster 61 Ir21a FBgn0031209 FBtr0113008 1 1 1 95 2L 23062 23080 TAGCATTCGTAACGTTGCC 58 22927 23003 CACCATTGTTCAGGGTTCC 58 NA Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078474 3 1 2 86 3L 21944189 21944264 GATGAAGGTAATGTACCCTGTG 58 21944311 21944329 GGGAAAGATCTCGGAGGTG 59 NA Drosophila melanogaster 61 CG17580 FBgn0040755 FBtr0087857 3 1 1 266 2R 8694364 8694382 GTACTTCACCCTCAAGTCG 57 8694667 8694685 AGGCAAATGTAGACTGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302147,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 2 9 9 80 2L 8224523 8224604 TAGTGATATCAGATCTGCCCG 59 8224463 8224481 ACAGACCGATCAGGATGAG 58 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079538 1 1 4 108 2L 8030938 8030956 ATATGCGAACACCAGTGTG 58 8031028 8032070 TACGCTATATCCTGCACCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG11816 FBgn0030495 FBtr0073785 1 1 1 98 X 13447284 13447451 GAGTACAAATTGGTGATGAGCA 59 13447207 13447225 ATTGTAGCCCTCCTGAACG 59 NA Drosophila melanogaster 61 CG42590 FBgn0260967 FBtr0301744 2 1 1 60 3L 8062219 8062240 AGCTTACACAGGAAATTCTCCA 59 8062180 8062201 AAGAAATACGGCTTCTTCTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586,FBtr0112890,FBtr0075028 1 3 4 255 3L 19153738 19153756 AACCAGATAGCAGCAAAGC 58 19139356 19139374 GGATCAGGACCTTCAGTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221 3 1 2 76 X 5578111 5578129 ATTATCGCGATACGGAGCC 59 5578238 5578258 GATATTGGCCATTTGGTAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42305 FBgn0259201 FBtr0299687,FBtr0299686 2 2 2 60 2L 18813142 18813319 AGTCTATCTAAACACCTGTCTTCC 59 18813337 18813356 AATTGCCGCAGTTACTAGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13228 FBgn0033588 FBtr0088106 1 1 1 62 2R 7121719 7121737 AAACAGTTCCCGTTGTGTC 58 7121763 7121781 GTATCGTCTGTATGACGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RnpS1 FBgn0037707 FBtr0082066 3 1 1 278 3R 5377880 5377901 CGTTTAACAAATCGGCAATACG 59 5378484 5378502 GATGATGAGGAGCTCGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717,FBtr0089715,FBtr0089716 1 3 3 145 3R 19117369 19117450 GATCCTGATGAGGTGGCTC 59 19117242 19117262 ACAAAGCGGTAGACATATCGT 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-3342 FBgn0086667 FBtr0091788 2 1 1 118 X 5418436 5418454 GACAAATCATACGTGCCCA 58 5418336 5418354 ATTGTTTCTCGTCCTTGGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 swaPsi FBgn0016974 FBtr0070923 3 1 1 271 X 6256363 6256381 CCAGTATAGGCTGAGTCGC 59 6256057 6256128 CATGATGTTCGCCACTACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG34401 FBgn0085430 FBtr0112653 1 1 1 80 X 18772011 18772091 GCAGTCTATCAAGCGATCG 58 18772135 18772153 CATTTGGAGTTGCTCTGCA 58 NA Drosophila melanogaster 61 CG7322 FBgn0030968 FBtr0074654 3 1 1 115 X 18750458 18751111 ATTTCGACACCCACTTCGA 59 18750361 18750379 GGATGACGCTATCGAGGAC 59 NA Drosophila melanogaster 61 wgn FBgn0030941 FBtr0074617 2 1 1 76 X 18522834 18522852 ATCGACTGGGTTGTCTTGG 59 18522710 18522728 TCGAAGTGCTCATACTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6470 FBgn0030933 FBtr0074621 3 1 1 141 X 18407848 18408378 GTTGCAATCTATTGCTATCTCCTC 59 18407730 18407748 CCTTCATCATGATCGGGCT 59 NA Drosophila melanogaster 61 unc-4 FBgn0024184 FBtr0074460 3 1 1 213 X 17663629 17663648 AGGATCTAATGAGGATGGCG 59 17670305 17670463 ATTCTGGAACCATACCGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 3 2 2 108 X 15691391 15691477 TCCACCTGCTGATATTAGAAGG 59 15691304 15691322 CACTATTGGAACGAGCAGC 59 NA Drosophila melanogaster 61 CG11162 FBgn0030509 FBtr0073811 1 1 1 86 X 13571587 13571605 TCGATGAGCGATCATACGG 59 13571653 13571743 GTAGTTGAACTTGGCATGGTG 59 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 3 3 3 83 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604677 12604696 GCTATTGGTCATAGCTGACG 58 NA Drosophila melanogaster 61 wisp FBgn0260780 FBtr0073573 1 1 1 80 X 11792385 11792692 CAACTTTACGCCCAAATGGA 59 11792734 11792753 GTTGATGTCGTGATACTGCG 59 NA Drosophila melanogaster 61 CG12662 FBgn0030074 FBtr0071264 2 1 1 60 X 8877858 8877877 TACGTAATGAATCGCATCCA 57 8877817 8877838 GATGGTACATGAACTTCAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10920 FBgn0029963 FBtr0071150 3 1 1 60 X 7747444 7747465 CGTAGTGGTTATAACACATCCC 58 7747405 7747423 CACAAACTGGGCTATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2059 FBgn0029942 FBtr0071047 2 1 1 81 X 7181120 7181211 GTTTCCCGAAAGGTGTACG 58 7181255 7181274 TCATCGCTTTGGAATTGTGG 59 NA Drosophila melanogaster 61 Pat1 FBgn0029878 FBtr0070945 3 1 1 117 X 6489265 6489357 ATTGATATAAGCCTGCGTCTG 58 6489433 6489454 GCGCATACTTCAAATACTTCTC 58 NA Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070841 3 1 2 137 X 5640824 5640842 TTGCGAGTATTGGGTGGAG 59 5637846 5637867 CACCAGGAAGAGTATGATTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14811 FBgn0029590 FBtr0070373 2 1 1 60 X 1715817 1715835 TTCTCCCAAGCTTGTAACC 57 1715775 1715794 TGATAGAAATACGACGAGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14785 FBgn0027795 FBtr0070231 3 1 1 123 X 1349969 1350063 AGATCGAGATATTCCTTTCCGT 59 1349867 1349885 GTGCACAAGTACCAAGTCG 59 NA Drosophila melanogaster 61 Su(Ste):CR42442 FBgn0259873 FBtr0300170 3 1 1 124 U 9728471 9728489 CATCTTCTTACGCAGCTGC 59 9728365 9728383 ACCGAAAGCATAGGGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42416 FBgn0259847 FBtr0300144 2 1 1 82 U 6868947 6868965 CTTAAATCGCCCAAGTCCT 57 6869011 6869029 TTGACTTCGTAATGCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41087 FBgn0069947 FBtr0301119 3 1 1 91 U 2089795 2089813 TCCACGTTCACCATAATGG 57 2089668 2089740 AATCGTCGTCCGATTTCTG 58 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 2 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi18S-1377c FBgn0083049 FBtr0113596 3 1 1 74 3R 26033161 26033180 CCGTTCTTGTGTTATTCGCT 59 26033106 26033124 ATTCGTTGCTTCAGTTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1377c FBgn0083049 FBtr0113596 1 1 1 60 3R 26033103 26033122 AAACTGAAGCAACGAATCAC 57 26033062 26033080 GTAATGATGCAGTCCTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3405b FBgn0082959 FBtr0113589 2 1 1 65 3R 24427669 24427689 CCCAGCCCATATTATATCGTG 58 24427713 24427734 GTGCCTTATACTCTTTCATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3571 FBgn0082954 FBtr0113580 2 1 1 60 3R 1423382 1423402 TAGAGTAAGAAAGTTCGACGG 57 1423342 1423360 CCAAATGAAGCGAAAGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 2 1 1 66 3R 21095371 21095389 GTATTCGCGTCGTATTCCG 59 21095417 21095492 AGCATAGAAAGATCTAGCCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG3669 FBgn0039838 FBtr0113313 2 1 1 84 3R 27085023 27085041 TGGAGATATCGATGAGGCG 58 27085088 27085397 GCGATTGGGATTCTTTACGA 58 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684,FBtr0110860 3 2 2 99 3R 26339292 26339311 GGAAAGGTCCTCAAACAGAG 58 26339153 26339233 TCTTCATTTCTCCTTTCGAACC 58 NA Drosophila melanogaster 61 Jon99Fii FBgn0039777 FBtr0085690 1 1 1 100 3R 26313003 26313021 TTTGCATCAACACCAACGG 59 26312921 26312939 GAAGGAGGTTACTCCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS28a FBgn0039739 FBtr0085601 1 1 1 88 3R 25848278 25848296 GTGGTCGAGATCCTTGGAC 59 25848208 25848226 ATAATCTGGCGGCTTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 3 1 1 154 3R 25631563 25631581 CTTATCGAGACGGAGTCCT 58 25631368 25631447 TTCTCATGTATTGCTTGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2014 FBgn0039669 FBtr0085440 2 1 1 68 3R 25342132 25342151 TAATGTACGGAATCCTGCAG 57 25342182 25342200 TCCTGTACCACATCTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31445 FBgn0051445 FBtr0085401 3 1 1 83 3R 25067286 25067365 GTCATTTAAACGCTACATGCAG 58 25067224 25067245 GTCATCAAACTAAAGGTGTCGT 59 NA Drosophila melanogaster 61 Klp98A FBgn0004387 FBtr0085211 1 1 1 80 3R 23376350 23376372 CGAGATTTCTCTGAGTATGTAGC 58 23376189 23376313 GATCTTCATTCCCATCTCATCC 58 NA Drosophila melanogaster 61 CG14551 FBgn0039408 FBtr0084971 3 1 1 130 3R 21887694 21887713 TCAACAATCTCTGGCTGGAG 59 21887271 21887289 ATAGATAAGTGGTCCCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4960 FBgn0039371 FBtr0084919 2 1 1 60 3R 21612463 21612481 ACTTCCTGAAGCTTCACGA 59 21612421 21612439 TAGTCGTCCTTTGGCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4956 FBgn0039370 FBtr0084920 2 1 1 60 3R 21603823 21603842 TTATGGGCCTACTTCATCCG 59 21603782 21603802 AACAGCAATCCAATCAGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps33B FBgn0039335 FBtr0084835 1 1 1 88 3R 21299440 21299515 TCCTGGCTGAAGTTGAAGG 59 21299567 21299585 TAGATGTGCACCTGATCGG 59 NA Drosophila melanogaster 61 CG13654 FBgn0039290 FBtr0084805 2 1 1 80 3R 21038188 21038264 AGAGTGGTCGATGGTATGTG 59 21038306 21038325 TAACGCTCTCCATGATGGAC 59 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 3 3 3 80 3R 20699677 20699837 CGGATGCTAAATACGTATGGG 58 20699617 20699637 AGTTGTCCAGTGGAATAAGGA 58 NA Drosophila melanogaster 61 CG13622 FBgn0039202 FBtr0289971 3 1 1 60 3R 20348796 20348815 GGTATTGACACCTCGAACAC 58 20348755 20348773 CGTAAAGGCGACGATTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ccap FBgn0039007 FBtr0084333 2 1 1 94 3R 18526877 18527098 TGGCAAATCACAAGCTAAGTG 59 18526750 18526768 ATACGTACGCTTTCGTCCA 59 NA Drosophila melanogaster 61 CG5346 FBgn0038981 FBtr0084289 2 1 1 80 3R 18347502 18347764 GATGAGAAGCTCAAGACTGC 58 18347441 18347459 ACGGATATAGTGCTGTCGG 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 3 3 3 71 3R 18288993 18289067 AAGTCGTATTTGTCGGGCA 59 18289102 18289120 TCCCTTAGACTCCATCACG 58 NA DesignNoJunction Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787,FBtr0083872 3 2 2 82 3R 16125059 16125077 CAAGTCACCGATGAAAGGT 57 16125120 16125197 TGAGCACACTGTTATTCATCTC 58 NA Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083860 2 1 3 84 3R 15689905 15690007 TCGTGAGCAGTCGAATCAG 59 15689839 15689858 TATTGCGACTATAGTCGCGA 58 NA InUTR Drosophila melanogaster 61 CG3581 FBgn0038697 FBtr0083775 2 1 1 60 3R 15200232 15200252 TCTAACCAGATGGCAAATTCC 58 15200192 15200210 CTCGTAGAACTCCCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14324 FBgn0038527 FBtr0083500 1 1 1 133 3R 13444490 13444509 CCAATAGAGAACATGAGGCA 57 13444321 13444341 ACAAAGTTGTTGTAGACAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14327 FBgn0038526 FBtr0083465 3 1 1 121 3R 13439673 13439691 AAGACCTGTGTTGTTTCGA 57 13440115 13440136 CGTTTCATCCAGGTTAATAAGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5265 FBgn0038486 FBtr0083407 3 1 1 60 3R 12964956 12964974 AATCCGATCAGCCAAACCT 59 12964995 12965016 CGGTTGAGGATTTCTTCAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5404 FBgn0038354 FBtr0083165 3 1 1 80 3R 11531790 11531810 CATTGAAGAGTCGAATATGGC 57 11531848 11531924 CGGTCCAATAACTCTAGTAAGAG 58 NA Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093,FBtr0083092 3 2 2 60 3R 11187669 11187688 GATCATGAAACACGATCGCC 59 11187711 11187729 CTCGATGGTAATGTCACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42404 FBgn0259823 FBtr0300117 3 1 1 99 3R 11077978 11077996 TTCTGGTGAATCGCCTGAG 59 11078059 11078138 GCTATGTAGCCAATGCTGC 59 NA Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082932 2 1 2 96 3R 10152896 10152983 CCAGGAATCTTTCACGGTC 58 10153043 10153061 ATCTGCCGAACTTGATCAG 57 NA InUTR Drosophila melanogaster 61 CG33109 FBgn0053109 FBtr0082900 1 1 1 60 3R 10046761 10046779 CTTCGATTGCGTAGTTGTG 57 10046719 10046740 AGTCCAAGTTAAACCGAATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15887 FBgn0038132 FBtr0082776 2 1 1 78 3R 9114361 9114379 CATGTGATTTGGTGCTGGG 59 9114005 9114319 AAAGTACGACTTTCCGCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 1 2 2 80 3R 8681484 8681563 GAAACCTGGATGGAAAGATAACC 59 8681426 8681447 ACATATCGTTGTCAATTGAGGC 59 NA Drosophila melanogaster 61 CG6188 FBgn0038074 FBtr0082651 3 1 1 80 3R 8501094 8501115 CTTATCGATCATCGCAACTACG 59 8501150 8501466 GTGACTCGTATTATAGTAGATGCTC 58 NA Drosophila melanogaster 61 trbd FBgn0037734 FBtr0082091 2 1 1 82 3R 5535041 5535122 AGGACATCTTCCGTCTGAG 58 5534977 5534995 CGACATTACGGCTACTTCG 58 NA Drosophila melanogaster 61 CG34117 FBgn0083953 FBtr0110817 1 1 1 166 3R 5225750 5225768 GTTGAGAACAGCTGTTCGG 59 5225546 5225564 AACTTCTTGTATTGCGCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11755 FBgn0037611 FBtr0081903 1 1 1 60 3R 4504194 4504215 TTGCTCTAGGAGTCATATACCC 58 4504236 4504254 GGTGGTTGGAAAGGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42286 FBgn0259182 FBtr0299666 2 1 1 94 3R 4192157 4192485 CGTATGAAATCGAGTTCCCAG 59 4192083 4192101 TAGTGCTCGTGGAACTCAC 59 NA Drosophila melanogaster 61 CG1075 FBgn0037397 FBtr0078583 1 1 1 60 3R 1854285 1854304 TTAAGCTGGCTCGAAATTGC 59 1854429 1854449 ACCAGTTTCGCAATACTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1427 FBgn0037347 FBtr0273377 3 1 1 80 3R 1427573 1427643 GTATAGCCTGCAAACTCGTG 59 1427684 1427704 GTGCCTCTAGTAAGTCTCCAG 59 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 2 3 3 89 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210504 1210522 TATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 Tim17b1 FBgn0037310 FBtr0078784 2 1 1 86 3R 1126159 1126177 CTTCCGGAAGAAGGAGGAC 59 1126225 1126436 GAGGTTAGTCCAGTTCTAGCA 59 NA Drosophila melanogaster 61 corto FBgn0010313 FBtr0078844 2 1 1 168 3R 911308 911326 AGAAGGACTACAGCATCCC 58 911158 911176 TGCATGTTGTTCACGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hus1-like FBgn0026417 FBtr0078876 1 1 1 93 3R 634985 637713 GGTTGAAAGTTCTTTGCTGAC 58 634912 634930 TTAAAGTGGCCACAATGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1074 FBgn0037250 FBtr0078925 3 1 1 81 3R 261157 261234 TGCATAATAACAGATCCTCCCT 58 261276 261294 TAGTGTTGGCCTTTACGCT 59 NA Drosophila melanogaster 61 TwdlG FBgn0037225 FBtr0078982 2 1 1 80 3R 74727 74921 CCATTCAAGCTCAATATGACCA 58 74668 74686 CAATCACGGATGTAACGGG 58 NA Drosophila melanogaster 61 CG11370 FBgn0037181 FBtr0078522 1 1 1 109 3L 22705672 22705690 TATGCAGTATGTCCAGCCC 59 22705761 22705846 GATTGCAATCCTTCAGGTAGG 58 NA Drosophila melanogaster 61 olf413 FBgn0037153 FBtr0301492 2 1 1 82 3L 22222201 22222219 GGCATCAACATATTCGCGG 59 22222264 22222376 TCCTCGGTTTGTCGTATCTG 59 NA Drosophila melanogaster 61 CG12972 FBgn0037076 FBtr0078403 3 1 1 80 3L 21339166 21339798 CACCAAAGGGATCAAATCCC 58 21339105 21339125 TCATAGTAACGGATTACGGCA 59 NA Drosophila melanogaster 61 CG11037 FBgn0037038 FBtr0078334 3 1 1 83 3L 20953861 20953881 GTGACAGTGCCAATTATTCAC 57 20953722 20953742 AGCACATATCATACTGTCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11396 FBgn0037022 FBtr0078276 1 1 1 80 3L 20779924 20780001 GATTAAGGGAGATAAACTCCGC 58 20779865 20779883 GAAAGTCGTTCTTGGCCAC 59 NA Drosophila melanogaster 61 trc FBgn0003744 FBtr0074922 3 1 1 95 3L 19825928 19825949 TTAAAGAAGTCGCATCGAACAG 59 19825797 19825872 CTTGGAGTCCATCGGACTG 59 NA Drosophila melanogaster 61 CG3808 FBgn0036838 FBtr0075041 2 1 1 73 3L 18993414 18993433 TTGAAGTGAAGAACATGGGA 57 18993304 18993325 GTCAAATTTGAGGGTGTTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32189 FBgn0052189 FBtr0075163 2 1 1 198 3L 17828094 17828112 ACAACTGATTCGTCCACCA 59 17827914 17827932 ATCTGGTGTTTCAGTTGGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG13724 FBgn0036707 FBtr0075214 3 1 1 60 3L 17316890 17316910 CGCACGATTATCCATATCCTC 58 17316931 17316950 AATGCTGTGGGTATAGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13046 FBgn0036595 FBtr0289963 2 1 1 84 3L 16281333 16281416 CCCAATTTGACTTGTGTATGGA 59 16281270 16281290 CTATCGAGTAATCCAGGTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34248 FBgn0085277 FBtr0112442 3 1 1 248 3L 16263854 16263872 ATTTCAGGTGGTGCTCCTC 59 16263624 16263642 GGAATGGAGTTGCTGTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7650 FBgn0036519 FBtr0075591 2 1 1 63 3L 15602619 15602637 CTCAGCGATGACTTCTTCG 58 15602574 15602592 CCACTATAATGCCGTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13465 FBgn0040809 FBtr0075674 1 1 1 60 3L 14937265 14937284 GTCTTCAAGAACTCCAAGCC 58 14937224 14937244 TGCAAGAGTAGATGATGTTGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6650 FBgn0036402 FBtr0075769 2 1 1 80 3L 14025986 14026063 CATGTCTAGAAAGCTGCGG 58 14026106 14026125 AGATGGATGTCATCGTTTGG 58 NA Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 1 2 2 88 3L 13035389 13035407 CACCAAGATCGTCATGCAG 59 13035458 13035550 TGATGACATCCATGTAGCCA 58 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913,FBtr0075914 2 2 2 80 3L 12732908 12732929 CTGCAATTGAATCTCTTAAGCG 58 12732970 12733044 CTGTGGCCAGTAGTTTCTC 57 NA Drosophila melanogaster 61 viaf FBgn0036237 FBtr0076062 3 1 1 144 3L 11986248 11986266 CTGGTCATGAGTCACTTCG 58 11985953 11986141 GTATCTTCGTTTGGGTCCTG 58 NA InUTR Drosophila melanogaster 61 byn FBgn0011723 FBtr0076039 2 1 1 80 3L 11924612 11925105 GGCATGGCTAAAGTCTGAC 58 11925148 11925167 GAAACATTGCCACTGAGTCC 59 NA Drosophila melanogaster 61 CG33490 FBgn0053490 FBtr0089526 3 1 1 80 3L 11567119 11567202 TTAATCGCAGATACTCAAAGCC 59 11567060 11567080 TCTTGATACCTGAAGGATCGA 58 NA Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 3 2 2 81 3L 11556186 11556409 GCGTCCAAGATAAAGATTAAGG 57 11556450 11556469 CCAAATAGGGAGATCCTCCT 58 NA Drosophila melanogaster 61 Sgs3 FBgn0003373 FBtr0076096 3 1 1 211 3L 11505337 11505355 GAAGCTGACCATTGCTACC 58 11505603 11505621 TAGATGTCGTGCATGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33700 FBgn0053700 FBtr0301069 2 1 1 102 3L 9507484 9507569 CTCCTGTCCATATGATCACGA 59 9507402 9507423 CACTCTTATCATGTAATCGCCA 58 NA Drosophila melanogaster 61 CG7927 FBgn0027549 FBtr0076684 3 1 1 132 3L 8105696 8105716 AAATGCTCAGCTACAAGAAGG 58 8105809 8106125 CTGCAAACCAGCTTCTTCTC 59 NA Drosophila melanogaster 61 CG34030 FBgn0054030 FBtr0100085 3 1 1 82 3L 7067987 7068007 GCCATATTCCTTCTCATTCGA 58 7067836 7067945 TGACAGTAAGCTACAATGGAG 57 NA Drosophila melanogaster 61 CG10226 FBgn0035695 FBtr0077012 3 1 1 80 3L 6232423 6232441 AAGAACTCTGGGTCAGGGA 59 6231870 6232383 GAGGCATTTGTGAGTATCTTTCC 59 NA Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302,FBtr0290123 1 2 2 186 3L 4446614 4446632 ATTGCTCGTTTGCTTCTGC 59 4447281 4447299 ATCAATGTACTCCGGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073342 2 1 3 166 3L 4299482 4299500 CTTTATCGGCACTCGAACG 59 4298761 4299352 GGTGTGGCGTGTTTAACAG 59 NA InUTR Drosophila melanogaster 61 CG10357 FBgn0035453 FBtr0300062 2 1 1 80 3L 3615612 3615708 TCTGAGAAATGCCTATACTGCT 59 3615746 3615767 GGATAATCTAGATTGGCCACAG 59 NA Drosophila melanogaster 61 5SrRNA:CR33418 FBgn0053418 FBtr0086410 1 1 1 60 2R 15629736 15629754 ATACATCGGTTCTCGTCCG 59 15629694 15629712 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS17 FBgn0034986 FBtr0072277 3 1 1 95 2R 20061856 20061875 CTCCTACTAATGGGCCAGTG 59 20061716 20061803 GTACATATTCAGGTTCTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Dcp-1 FBgn0010501 FBtr0072062 1 1 1 89 2R 19440346 19440364 CATACACGCCGACTTTCTC 58 19440477 19440495 GATTGCATGTACCAGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 NtR FBgn0029147 FBtr0071762 1 1 1 80 2R 18016975 18017059 TATTTGCCGTTGATTGCCTG 59 18017100 18017120 GAGAATGAGGGAACTCCTACG 59 NA Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 3 2 2 81 2R 17009342 17009360 GTTGCCATGAACACGAGTC 59 17009404 17009520 CCTCTATGAGATCAGCCTCC 58 NA Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086580 3 1 2 83 2R 15026844 15027206 CTAACTGGTCTGGTGGGTC 59 15027252 15027271 AAAGATCAACGGTAGGACCA 58 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 1 3 3 80 2R 14882582 14882600 AATGTCACCCTACAACGGT 59 14882641 14884407 CATAATTTGACCTGATGTGGGA 58 NA Drosophila melanogaster 61 CG5482 FBgn0034368 FBtr0086661 2 1 1 81 2R 14518061 14518142 AAAGGAAGAATATTGGAGGGCA 59 14518001 14518019 TTTCGGGTTCGAGAGTAGC 59 NA Drosophila melanogaster 61 CG5226 FBgn0034355 FBtr0086698 3 1 1 80 2R 14409881 14409900 TCTTGGTGTCTTCAGTGGTC 59 14409941 14410034 GCTCAATCATACCCAAATCGG 59 NA Nonspecific Drosophila melanogaster 61 CG17287 FBgn0034202 FBtr0087000 1 1 1 60 2R 13045621 13045643 GGCTTCCTGCTCTAATAATTCTG 59 13045583 13045604 TGGTAAACAAATACGTGGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8311 FBgn0034141 FBtr0087121 2 1 1 93 2R 12475169 12475187 TCGGGAATTCTAGCTGTCG 59 12475002 12475112 GGGATCGGGAAGATCTTCC 59 NA Drosophila melanogaster 61 CG33458 FBgn0053458 FBtr0087085 3 1 1 86 2R 12374727 12374745 CCACTATACAGAACAGCCC 57 12374794 12374863 AATCGGACGTATGCTATCTG 57 NA Drosophila melanogaster 61 CG10257 FBgn0033985 FBtr0087408 2 1 1 108 2R 10830584 10830711 TCAATGGCAAGATGTACCG 57 10831289 10831307 AGTTTGAACATCCAGTCGC 58 NA Drosophila melanogaster 61 Cyp6a21 FBgn0033981 FBtr0087456 1 1 1 119 2R 10773367 10773385 ACATTCAGAACCGGGTGAG 59 10773213 10773285 GAAGGGTTTCCGATACAACC 58 NA DesignRelaxed Drosophila melanogaster 61 Sin1 FBgn0033935 FBtr0087487 1 1 1 60 2R 10300204 10300223 TTACAATATCCCGACGTTCC 57 10300244 10300264 CCTCTGTCATATACAAAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6197 FBgn0033859 FBtr0087623 2 1 1 80 2R 9483295 9483313 GTTTGCTGAGTTGGAAACG 57 9483357 9483438 GGATCACAAACCTGTGAGC 58 NA Drosophila melanogaster 61 CG13157 FBgn0033732 FBtr0087925 2 1 1 90 2R 8304370 8304672 GGCAGATGCTATTGATGCC 59 8304725 8304744 GGAATAGGCAGGATTCTGGT 59 NA Drosophila melanogaster 61 Tapdelta FBgn0021795 FBtr0088153 3 1 1 203 2R 7258211 7258288 ACAAGTACCAGGTGAGCTG 59 7258026 7258044 AAAGCTCAGCCTTGATCCA 59 NA DesignRelaxed Drosophila melanogaster 61 Tapdelta FBgn0021795 FBtr0088153 2 1 1 203 2R 7258212 7258289 AACAAGTACCAGGTGAGCT 58 7258027 7258045 AAGCTCAGCCTTGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 san FBgn0024188 FBtr0088126 1 1 1 80 2R 7248321 7248467 ACAGACAACATGACTAGGAGC 59 7248507 7248527 GGTGTTGAGCTTCTTTAGCTG 59 NA InUTR Drosophila melanogaster 61 CG7637 FBgn0033548 FBtr0088252 3 1 1 84 2R 6698256 6698339 TACACCCTGAAGAAACGCA 59 6698190 6698208 GGGAGTACTTATCCTCCGG 58 NA Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 3 2 2 60 2R 6044693 6044711 AAGTTTAGCGAGCTACGCA 59 6044651 6044669 ACTCCAGACTTTCCCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 3 2 4 174 2R 5015037 5015055 ATTGACGATCGCCTAACGA 59 5013562 5013695 CCTCCTTAACCGATTTGACG 58 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 3 3 3 80 2R 3858088 3858108 AACAAGTGGCTACATATGGGA 59 3857971 3858049 GTAGATGACCATATGCGTATCC 58 NA Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088934 1 1 3 84 2R 3629416 3629522 GTAGACTATTTGCGGGACAC 58 3629351 3629369 GTCGATCTGGTAGACGTCC 59 NA InUTR Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 1 3 3 135 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111291 2 1 2 103 2R 560474 560493 AATCTTTGTAACAGCAGCGA 58 560554 560628 CTTCTGGTATCACTGATAAGAGAC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640a FBgn0083026 FBtr0113540 1 1 1 60 2L 20418523 20418544 TTGGGAGACAAAGTTTACATGC 60 20418564 20418583 TATCGGAGCGTTGTAGACAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-U1230 FBgn0086031 FBtr0114307 1 1 1 60 2L 865474 865493 ATTCCAATGCTGATCCAAGC 59 865433 865451 CATGGCCGCAATTATTCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33904 FBgn0053904 FBtr0091908 1 1 1 60 2L 21438650 21438669 AGAAGAACATCACCAAGACC 57 21438609 21438627 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0081476,FBtr0110895 2 2 2 80 2L 21210043 21210115 GACATTCTGCCGAAAGCTG 59 21210154 21210177 GTAGGAATTCAGCATCATTAGAGC 59 NA Drosophila melanogaster 61 CG31988 FBgn0051988 FBtr0081490 3 1 1 93 2L 21202486 21202510 GAGAAGAGTACGATAACGAATTCAG 59 21202256 21202436 GGCTTCTCGATTGGTAATGG 58 NA InUTR Drosophila melanogaster 61 CG13079 FBgn0032808 FBtr0081255 2 1 1 81 2L 19558126 19558148 CCTATAGAACCCATAAGGTGGAC 59 19558184 19559107 GTGTCCTCTTTAATCTTAGTAGCG 59 NA Drosophila melanogaster 61 LSm7 FBgn0261068 FBtr0080934 2 1 1 60 2L 16742961 16742979 GCAACAATGACGGTAAGGA 58 16742919 16742938 AAGTACTTGGAGAGGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703,FBtr0080702 2 2 2 80 2L 15091216 15091302 AGAAACTTAAAGAGCAACTGGC 59 15091341 15091361 AATAGGGAATCGCAGACTCTC 59 NA Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0080674,FBtr0100163 1 2 2 107 2L 14810804 14810882 AACATGCCGATAATAGCCA 57 14810953 14810971 CTTTCGACCTAGACCATGG 57 NA InUTR Drosophila melanogaster 61 CG16879 FBgn0028904 FBtr0080596 3 1 1 80 2L 14105299 14105318 ATCTACAATGTGCACATGGA 57 14105360 14105478 TTCAGTGATAATGCGGTAGG 57 NA Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 3 2 2 81 2L 13971669 13971747 CCGATTGCTATCAGAAGTGC 59 13971789 13971809 TCATGGTAGGTATATCCCGGA 59 NA Drosophila melanogaster 61 CG31848 FBgn0051848 FBtr0080479 3 1 1 60 2L 13265440 13265461 CTTAGTTGTGCTGTTACTTCGG 59 13265401 13265419 GCATCAGGATAATGGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31848 FBgn0051848 FBtr0080479 1 1 1 60 2L 13265477 13265495 AGTCATCGCCTATGAGGGA 59 13265435 13265454 CAGATCCGAAGTAACAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271,FBtr0080272 3 2 2 60 2L 11586261 11586282 AACTTTCTCCAGGATTTCTCCA 59 11586222 11586241 CCTGCTGAATACTTTCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16743 FBgn0032322 FBtr0080147 2 1 1 60 2L 10972786 10972806 GCACAAGTACAATTATCCTGC 57 10972827 10972846 TCCCATTTCTTGATACGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6443 FBgn0032290 FBtr0080110 2 1 1 116 2L 10729296 10729377 AAAGCCAGAGCAGAAAGAC 58 10729457 10729475 GAATAGAGCCTACCCATGC 57 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 3 2 2 83 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492701 10492794 CTAATGGACGTCAACTCCCT 59 NA Drosophila melanogaster 61 sop FBgn0004867 FBtr0079905 1 1 1 60 2L 9896944 9896964 GCAAGATCAAGTCTTTGGAGG 59 9896904 9896923 ATCTCGAACTCTTTGATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bka FBgn0010520 FBtr0079874 2 1 1 114 2L 9895362 9895443 GGAATTACAGCTTACAATGGGA 58 9895518 9895536 AATCTGATCCTTAAGCCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fy FBgn0001084 FBtr0079712 1 1 1 80 2L 8401884 8401902 TGCCCATATGGATGAGCTG 59 8401763 8401840 GCAAGGAATCTCATTGCGT 58 NA Drosophila melanogaster 61 CG7214 FBgn0031940 FBtr0079499 1 1 1 286 2L 7744624 7744759 AACAACATGAAGTTCGCCG 59 7744356 7744374 AGGTTGATTCCGGGAACAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 1 3 5 80 2L 7687853 7687871 GCCAATTACTCTCGTCGTC 58 7687915 7687983 CTTATCGGAGTCCAATGGC 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 3 4 5 88 2L 7682044 7682122 GACATATCTTCAAGATGGAACAGG 59 7682166 7682187 GAGGATTTGCTGATTATCCTGG 59 NA Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079445,FBtr0079444 2 2 2 84 2L 7429092 7429172 CCAAGTGGATAAGCTGCTG 58 7429219 7429238 GAAGTCGTTTACAGAGACGC 59 NA Drosophila melanogaster 61 CG5181 FBgn0031909 FBtr0079467 2 1 1 108 2L 7409505 7409586 TGAGGAACTTCAAGGTGGG 59 7409415 7409434 TAGCCCTTTGTCAGTCTGAC 59 NA Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 1 1 1 139 2L 6960470 6960547 CTTGCACTTACAGCAAAGC 57 6960650 6960668 AATTGGTTGATCAGCTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 Gas41 FBgn0031873 FBtr0079364 3 1 1 96 2L 6949528 6949605 CCCATGACACTGACTTTGAG 58 6949451 6949472 TCCTTAAGTGTAACAATCTCCC 57 NA Drosophila melanogaster 61 Ugt37b1 FBgn0026755 FBtr0079242 1 1 1 109 2L 6225754 6225829 ATCTACAGGGAGATCTATGGC 58 6225900 6225918 ATGGGTCCTTCGCTAATCC 59 NA Drosophila melanogaster 61 CG7251 FBgn0031723 FBtr0079117 1 1 1 80 2L 5587906 5587981 AGGGAATTAAGGTGGACCG 59 5587844 5587865 GCTTCTCTAGTAATTGCTGCTG 59 NA Drosophila melanogaster 61 CG12512 FBgn0031703 FBtr0079077 3 1 1 293 2L 5342244 5342262 TACGGCGATTAGAAGACCC 59 5340982 5341987 CATCGAGGTGGAAATGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 1 3 3 103 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034971 5035072 CAATAAGACCTTGACGTCCG 58 NA Drosophila melanogaster 61 CG14043 FBgn0031659 FBtr0078995 2 1 1 60 2L 4972072 4972093 CTACATCTACACAGAGGAGCAG 60 4972112 4972132 TAGTTCCAGACAACGATTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 3 2 2 153 2L 4837524 4837611 GGCGATAAAGAACATCACCC 59 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 CG3225 FBgn0031631 FBtr0077416 2 1 1 122 2L 4815846 4815925 AATGATAGGTGTGAAACGATGC 59 4815745 4815763 TGATGTTTCAGGGACGAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 1 1 1 70 2L 3693706 3693794 GAAATCTGTGGATTACCCGC 59 3693655 3693673 GCATCATAAGACCAGCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34049 FBgn0054049 FBtr0302372 3 1 1 109 2L 2264559 2264578 CGATTACTTAAAGCCAGGCT 58 2264407 2264487 AAATGGAGGAAACATCGCA 57 NA Drosophila melanogaster 61 CG7289 FBgn0031379 FBtr0077815 1 1 1 132 2L 1982484 1982551 CTCCAGAACAGAAGGATCCC 59 1982646 1982664 GTGAAATCGCGTTCACCAG 59 NA Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 2 1 1 133 2L 1165063 1165139 ACAAGGTCTCACTGAAGGG 59 1165235 1165254 TAGTTCGAAGACCGTAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Tango14 FBgn0031312 FBtr0077961 3 1 1 157 2L 1159324 1159342 GATCTCTGTCGATCCACCA 58 1159463 1159769 CTGATTTGATGGAGCTGCA 58 NA Drosophila melanogaster 61 CG2789 FBgn0031263 FBtr0078066 2 1 1 235 2L 559818 559836 CAACCTTAAGTTCCCGTCC 58 560035 560112 CTATGTCAATAAGGCCGCC 58 NA DesignRelaxed Drosophila melanogaster 61 ex FBgn0004583 FBtr0078059 2 1 1 80 2L 446520 446538 CCGTATGTAAACAGACGGC 58 446580 446658 AATTGGCTTAGAGGGTATTGG 57 NA Drosophila melanogaster 61 ebi FBgn0023444 FBtr0078055 1 1 1 106 2L 416697 416793 CTCTGGACTGGAATTGCGA 59 416861 416881 GTGTTGTCCCAAAGTAGAAGC 59 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078135 3 1 3 87 2L 284958 286315 ATTTGTGCGATAATTCAGGC 57 284890 284908 GAGGTTTCTTGGGTGTCAG 58 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 1 2 2 122 2L 156339 156431 CCTTGAATCGGGAGTGAGG 59 156514 156535 CCAGAAGAAAGCAATAACTCCC 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 2 2 3 80 2L 199735 200131 GCCAGTCTGAATGATTCTACG 59 200171 200191 ACCTCGCATTAAATGATGCTG 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 3 4 4 80 2L 872015 872035 ATCGCCTCAAGATAAACTCAG 58 872076 872222 CTAGAATGCGTACACCTTCG 58 NA Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 2 2 2 80 2L 1161974 1161992 CCCATCAATGGGATCTTCG 58 1161855 1161930 GTACTTCTCCTCTTGCGTG 58 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 3 5 5 81 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938581 CTTGATCCATCCAAGTTGGC 59 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 2 3 3 85 2L 2229506 2229527 GAGGCACTTAAACACATTAAGG 57 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 1 2 5 100 2L 2452406 2455066 AAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 1 2 4 150 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741232 2741250 TTGGTGAAGGTGAACTCCA 58 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 2 2 4 151 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741233 2741251 GTTGGTGAAGGTGAACTCC 58 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 1 2 3 92 2L 2994987 2995005 GCCCATGAGATGATCAAGC 58 2995060 2995444 GATGTTCGTCTGAAGGATCG 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 3 3 6 128 2L 3098023 3098041 GCAATCTGAGCATATCGCC 59 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 2 3 3 82 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336331 3336350 ATAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 3 3 3 83 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336330 3336350 AATAATAGGCGGATAGTCGGT 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 1 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 2 1 1 101 2L 3670473 3670492 ATTTCTTGCACTAGCTCACG 58 3670326 3670344 GGTGCAAACGTGTATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 1 1 1 76 2L 3693816 3693834 TTTCATCGCTCTTGCAAGC 59 3693689 3693707 AATTACCATTAGCGGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0290255 1 2 3 80 2L 3869045 3869121 ATGATCAACAGTTTGGATGGC 59 3869161 3869181 AAAGCCATCGATGTACTTGAG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 1 4 9 80 2L 3884509 3886994 CAATGAATCAGGAGTCACAGG 58 3884449 3884468 ACAGTTGATTGCGTTTCCAG 59 NA Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 3 1 1 223 2L 4227728 4227746 ATTTGGTTGCACGTTTCCT 58 4228193 4228213 CTTCTGAATGTTGTAGTCGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 3 4 4 80 2L 4343685 4343764 CATTCTGACCTTTCCCACC 58 4343807 4343826 AAGTAGAAGGCCTTCAAGGA 58 NA Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 3 2 2 82 2L 4651674 4651768 CCAAGCAGAACTGCTTCTG 59 4651813 4651832 CCAAGGATACTTGTTGGAGC 58 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 1 4 4 62 2L 4904915 4904939 CTCCATCTTATCCATAGTTTACTCC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983 1 1 2 148 2L 5039893 5039911 AACCTACAGGATCGCTGTC 59 5040023 5040133 TCCAGCTGATTCACCTGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 3 5 8 97 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070167 5070186 GAAGATAGCGCTCTTGAGGA 59 NA Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 2 2 2 102 2L 5547903 5547981 GTGCCGACAGATACTTCGT 59 5548046 5548065 TGAAAGGATACCTTGCCCTG 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 2 3 3 106 2L 5946241 5946324 TCACCTGAAGATCCCATGC 59 5946393 5946412 CATACTTCTTGTCCGTGCAG 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 3 3 3 106 2L 5947158 5947244 GGTCTGGAGGACAAATTCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079196 3 1 3 150 2L 6101782 6121777 CACTGTTGATACTGAAGCCAC 59 6121889 6121907 AATCTCCTCGACGCTAACG 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 1 3 6 120 2L 6691067 6691085 CACGATACCGTGAATGGAG 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 2 4 4 80 2L 7404149 7404233 GAAGATGCCATGAGAGTGC 58 7404274 7404295 ATCCGCATAAGTTTGAATCTGG 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462 3 1 5 120 2L 7455749 7455832 CTTAACGAGGTGTTGAAGAACC 59 7455650 7455671 TGGTTACAATGGTGTACATGGA 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 3 4 4 80 2L 7649008 7649026 GAGGACTTAGTCCTTTGCG 58 7648878 7648967 CGGCTTAATTGTACTGAAACAG 58 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 2 2 3 82 2L 7986006 7986025 TAAGCTCGACTTCAAGTCGA 58 7986070 7986151 GATACGTGGTAGGGTTCGG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 2 4 4 80 2L 8187028 8187046 CTCTGATGTTCCTCTGCGA 59 8187090 8187176 TTTCCGTTTGCTGAGTTCC 58 NA Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 3 2 2 86 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935750 8935897 GATTACGCCAAAGAACTGGA 58 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817 1 1 2 174 2L 9252329 9252643 ATGACGAAGAGGACAGCAG 59 9252173 9252194 GAGTGCAATATGTTGAGATCCC 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 2 4 5 88 2L 9272528 9272549 GACGCATTAAAGAAGCAAATCG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079916 2 1 6 119 2L 9798300 9806458 CTGTTCCTCTTATAGGCACCT 59 9798201 9798219 GTGGCATCTCGTGAATGTC 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 7 7 83 2L 10259082 10259102 TGTTGATATGTGGCTCAAGGA 59 10258906 10259037 ATCATGGTACCGGTTCTGC 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 2 5 6 100 2L 10399597 10399615 AATGCATCAGGGAAAGCAC 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080030 2 1 2 80 2L 10459266 10459388 AATGTTAAAGAGCGCATCGA 58 10459429 10459449 GACAATGATATTGTTGGTGCG 58 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 3 3 3 80 2L 10512982 10513000 GCTGGTCTACATCTACACC 57 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0301005 2 1 3 83 2L 10581347 10581433 CTTTCGCAAGGCCATTGAG 59 10581282 10581300 GATCCTTCGAGCATTCCCT 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300114 1 1 4 91 2L 11163927 11165571 CACACCTGATTCCATGGGA 59 11163854 11163874 CCTGTTTCTTGAAGAATGGCT 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 1 2 8 89 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458199 12458217 TCATGAGATGCGACTTGAC 57 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 3 1 2 98 2L 12673617 12673635 AATGGTCGACATTGTCGTC 58 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 3 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068916 14068939 GGACGTTCTAGTGTATTATAGGGA 59 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496 2 2 4 103 2L 14601207 14601226 CTATCGAGATCTCGATGGGC 59 14600867 14601142 CCTTCAGACCTTGGTAGCTC 59 NA Drosophila melanogaster 61 CG31775 FBgn0028537 FBtr0301739,FBtr0080691 1 2 2 79 2L 14737635 14737720 TGATCCTCTTCATTGCCCT 58 14737574 14737592 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 3 1 1 60 2L 14871563 14871584 GACTATCTATCACTACAAGCCG 58 14871458 14871477 ATAAACCTTTATCCAGCCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 2 4 5 160 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737812 15737831 TCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 2 3 4 80 2L 16692113 16696593 TCGATCGAATAGAACCAGACG 59 16696635 16696653 AATTGAGTCCGGACAGGAG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 3 4 5 107 2L 17439290 17441811 AATGGACTCAGATCCAGCG 59 17439201 17439220 TGGTCATTCTGCAATTGCTG 59 NA Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 3 2 2 80 2L 18535124 18535201 AACTCCTTCCAGATTAAAGCCT 59 18535065 18535086 CTGATCAAAGTGATGATGCTCC 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0081223 2 1 3 81 2L 19385355 19385792 ATTTCCAACAAAGCCACTACAG 59 19385295 19385314 CTATAACCTCCACCGTAGCC 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0299519 1 1 6 118 2L 19515016 19515034 GATCACCTACAACTGCGGA 59 19514845 19514934 CATTTGCGCTATCCGAGAC 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268,FBtr0081267 1 2 7 86 2L 19577188 19577207 AAACGAAGAGCTAAATCCCA 57 19569162 19569183 GGGTTTCTCTACATAGGTATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 3 2 2 80 2L 19729579 19729600 GCTATCAGTATTATGTCGTGGA 57 19729639 19729729 CATCCGTGACCTTAAATTCAC 57 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389 3 1 2 105 2L 20677479 20677585 GAACGATAGATCAGCCAATATTCC 59 20677648 20677667 GAAACATTGGGAGGGAACAC 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081484 2 1 3 147 2L 21275799 21281142 CATGCTAGGAATCCCAGCT 59 21281253 21281271 GATTGACCCGTGTCTCCTC 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111247,FBtr0111245 2 2 6 131 2L 22741818 22741957 AAATTGGTTGAGACGGCAG 58 22742102 22742175 TTCAATGTATTCACCCGCC 58 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 2 4 5 82 2R 2503183 2503201 GGAGCTGGAAGCTATCTCC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 3 3 3 136 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554688 2554706 TGGTGTTGAGCATGTTGTC 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301422 2 1 7 104 2R 2622407 2625476 CGTTCTGTTCTACAAACAGCA 59 2622323 2622341 ATCTTCACAAACCCGATGC 58 NA Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 2 1 1 60 2R 2704054 2704072 CGGATTTCTAGGCAAGTCG 58 2704148 2704168 CTCTAGGGTGAATCCAGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 3 5 11 143 2R 2764835 2764853 GATGTTCTCCGATCAGGCT 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111068 1 1 59 92 2R 3244970 3244988 TGAGATTAACTACGCCCGG 59 3236472 3244914 TTGTACCATCGGAAGGCAG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111098 2 2 59 89 2R 3219876 3221902 AAAGTGAAGGTACCTCCCAG 59 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111053,FBtr0111056 2 2 59 80 2R 3219877 3226157 TGATTGTGAATGTACCTCCCA 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111063,FBtr0089016,FBtr0111061,FBtr0111065,FBtr0111101,FBtr0111071,FBtr0089019,FBtr0111074,FBtr0089018 2 10 59 87 2R 3219872 3229220 AGTTAATGTACCTCCCAGATGG 59 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111078 3 1 59 81 2R 3246156 3246174 GATTTCCCAGGGAATCGGA 59 3236465 3246114 GATGAACTTGTACCATCTGTGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 2 3 59 80 2R 3236477 3246963 CCACAGCCTTTCTTTAGATGG 59 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0113050 2 1 2 120 2R 3677974 3677994 CCTACCTCATCATATTCGCCA 59 3678134 3678208 TTGTGCCTCTCCTTGATGG 59 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 2 3 3 116 2R 3690701 3691031 ATATTTCCGAGACTTCATCGC 58 3690605 3690623 CCATCACATTGTCCAGCAC 59 NA Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 2 2 2 83 2R 3694699 3695088 CATCCCAGATACAAATGCTACTC 59 3695131 3695149 CTGAATCGCATTCTGGCAG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0300954 2 1 2 82 2R 4004718 4004736 CTGGAATCTGCCAAACGAG 58 4004510 4004672 TTGGACTAGAACTGGAGCG 59 NA Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 2 1 1 137 2R 4482354 4482372 CAACATGTTCTGCAAGCTG 57 4482028 4482046 CGCGCATTATCACAGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301191 3 2 3 97 2R 4900591 4900609 TTACAACGAGGTGATCCCG 59 4898910 4900530 ACTGCGGTATCAAGTCCAG 59 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0088665 3 1 2 85 2R 4909288 4909306 CAGTCTGCAGGATCTGGAC 59 4908980 4909241 TTGTGATGTCGACTTTCTCCT 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 3 2 4 89 2R 5013708 5014931 AGGACAAGACTAATCCGGC 59 5013523 5013543 TCTTGAATCCCTTATAGGCGG 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512 3 1 3 95 2R 5074633 5075638 AAACAGACTTGGAGGTTTGAG 58 5074558 5074576 CAGAAAGGTGACCATGCAG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 2 3 10 82 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 2 2 2 80 2R 5709942 5710025 CGCAGTACATCTTTAGCAAGG 59 5709882 5709903 GAAGTTCGAACTCAGATTCCAG 59 NA Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0289980 2 1 2 81 2R 5714554 5714916 GCGATCGAGGGTACTAAGAG 59 5714492 5714510 AACGACTGGTGTACTTGGG 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 1 2 4 139 2R 6359166 6359186 ACAAGTGTTTCACTGTCTGTG 59 6358239 6358721 ACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 3 2 26 118 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408767 6419548 TAGTCGTACTTCAGGTCTTGG 59 NA Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 2 2 2 109 2R 7327828 7328587 CGGTTAAGATTCTCATCGATCAG 59 7328656 7328674 GAGTCCCAGGAAGAACTCG 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 1 4 4 80 2R 7786100 7786120 AGCCATTAACCACAATAAGCC 59 7785971 7786059 CCACTGCTTATCCTGTTGAG 58 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0087917,FBtr0087916 1 2 3 88 2R 8276584 8276771 GATCACTCTTACCTGACTGAG 57 8276821 8276839 TAGAATCCCTTGGCATGTG 57 NA Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 2 1 1 71 2R 8282206 8282224 ATCATATCCCTCGACACCT 57 8282317 8282335 AGTTTGTCGTATAACCGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 3 2 2 81 2R 8309523 8309597 GTGCTAGATGATGCAACCT 57 8309460 8309480 TATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 3 1 1 61 2R 8317039 8317058 TTCTGCAGAGAACTCTCAGC 59 8316941 8316960 CTGTGAAGCGTTTGAATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 3 2 2 80 2R 8447315 8447401 GAGTGTACTATTCCGAGAACGA 59 8447442 8447460 GCAACTCGGTAAGAACTGC 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087889 1 1 4 144 2R 8466749 8466767 AGTATGTAGAGCGGTTGGC 59 8466046 8466641 TTGGTATTGACCTCGGCAG 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 1 6 6 153 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 2 4 6 141 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151378 9151396 TTCTCAATGGTGTTCGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 1 5 12 83 2R 9303457 9306504 AACCGCGATCTTCATTCAC 58 9303392 9303410 GATCCGTTTCGACTCTCGT 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0087703 2 5 6 82 2R 9327821 9327905 AGTCAGAGGAATCTACATCACC 59 9327760 9327778 ATCTACCTTGGCACAGTCG 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 3 5 5 82 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436390 9436472 ATACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110998,FBtr0110995 3 2 6 127 2R 10836922 10838202 CGGAGCATCGTTATTTCCC 58 10836442 10836460 GGAAGATGTGTCCGTTGAC 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 2 4 4 80 2R 11344304 11350806 TGATATCGAGGAAGAAACGTC 57 11350848 11350866 CTCTTGAGGAGCATCAGTG 57 NA Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 2 2 2 80 2R 11400205 11400223 GCTGGACTACTATGTTCGC 58 11400267 11401265 CGAATCAAACCCAATCGGT 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302795,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 3 5 13 90 2R 11848682 11848827 CCAATTCGAGACACATATTCTC 57 11848613 11848631 TGATCCATTGGATTTCGGG 57 NA Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 3 2 2 81 2R 11914689 11914709 GTGATCACCTTCAACATCCAC 59 11914550 11914649 GTTTAAGTTGTTCAACTGTGGC 59 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219 2 2 3 158 2R 12000325 12000344 ATGACGACGAATTTGAGTCC 58 12000463 12002285 GCTTTATTTGTGATGCCAACC 58 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 3 2 5 145 2R 12020009 12020027 TTCCTTCATGCTCTCCACG 59 12020136 12020940 AGTTGAACGCAACATCGTC 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 2 5 5 82 2R 12093318 12093420 TGAAGTGAAGAAGGCATATCGA 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0100001 1 1 2 160 2R 12307850 12307868 CAATGCGCTATATGTGGGC 59 12310251 12310537 GATTTCGGCATTCCACCTC 59 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 1 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 2 3 3 80 2R 12454485 12455296 CGAATTGGAGAAGATCCAGC 58 12455338 12455357 AGTAGAATCTTCCCGAACCA 58 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 2 3 3 102 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471727 12471745 GATCCGAAAGATCCTGCTC 57 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 3 3 3 80 2R 12508881 12508900 CTACTGATACGACCGAAACG 58 12508942 12509025 CAGTGATTCGAAGAGTGGTG 58 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 1 3 5 148 2R 12562740 12565923 GAAATCAGTACTGGATGCTCAG 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 3 3 6 133 2R 12897657 12897676 TGACAAGCTGTCCTACATCG 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 3 2 2 90 2R 12909214 12909232 CAGGATGTACATCGAGCAG 57 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 3 2 3 130 2R 12922399 12922420 GCAGGAGAAACTAAATCTGGAG 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603 1 1 8 104 2R 13409397 13411015 AACTTCCAGAGATTCGGGAC 59 13408409 13408433 GCTGGTTGTTTATAGAGTTTAGGAC 59 NA Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 1 1 1 60 2R 13613205 13613223 AATCCATGGAGGAGTGTCG 59 13613103 13613123 TTCAGATGCTCAATTGTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 2 3 7 96 2R 13714746 13714765 AGGATCAGAATCAGGATCGC 59 13714819 13714908 ATGTGAGGTCTGTAGATAGATCTG 59 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 3 4 4 80 2R 14363666 14363685 GGCTATGTTGGTTAAGTGGT 57 14363163 14363625 ACGTTCATAAGGCGATAATCC 58 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 1 4 4 80 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529503 14529522 ATCATGGTATTTAGCTCGCC 57 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631 2 1 2 100 2R 14712066 14712218 ATGTTCAACGACGACATGC 59 14711984 14712002 CCGGTGTAGGTGTAATCGA 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 3 8 12 80 2R 15064179 15064197 TTAGTCACAAGCAGTGCCA 59 15064238 15064456 GAAATGACGTTAGTTCCATGGA 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 1 3 19 89 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 2 5 19 97 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361463 15362042 CGATCCACTGTTTGTCTCTG 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232,FBtr0301609 2 3 6 112 2R 15461820 15488394 TCACAGTTGATGTCTTGCAC 58 15461727 15461747 CGCATCCAGATTATCGAACTC 59 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318 1 1 3 93 2R 16144127 16144207 GGGTCCAACAAATCATCACTC 59 16144054 16144072 GTCGATCCAATCGCATCTG 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 2 2 15 82 2R 16908770 16908788 CTTCGGATCACAGAACCAC 58 16909015 16910578 CCGTAACAATTGTCTGATGCT 59 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 1 3 3 80 2R 17059016 17059036 TAAATGTTACGGACTCACTGC 58 17059077 17059148 TCAAAGTACTGGCAAATGGG 58 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 2 3 3 137 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181863 TACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 3 2 8 128 2R 17187892 17191402 CCTGGCTATAACATAAATCGCT 58 17191491 17191509 GATGGTAAGATGTCGGCTG 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 3 2 8 135 2R 17185984 17191400 GCCAGCCAGAACATAAATCG 59 17191495 17191516 GATCATCGATGGTAAGATGTCG 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 1 4 5 175 2R 17202260 17202341 ATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 1 2 2 86 2R 17424146 17424165 ACATATCCGAGAGTCCTTGG 58 17424024 17424102 GGATGAATCGATGATTTACGAGAG 59 NA Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071691 1 1 2 137 2R 17494083 17494101 ATCCCAATGACCGACAGTG 59 17493857 17493982 TTGATCGGAGTTCGTAGCA 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776 3 1 2 166 2R 18158445 18168184 GGAAGAAGCCAAATCACTTCC 59 18168312 18168330 TCTGAACAATCTCGCTCCA 58 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0113107 2 1 4 80 2R 18226349 18226369 CCTCGAAGAACATAATACGGC 59 18225401 18226311 GACAGTAAATAAGGTATCGTGCG 59 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0112820 3 2 3 70 2R 18430847 18430871 GACATATCTCATCCTAAAGGATCAG 58 18428449 18428468 GATAAGATCGCTCCGACTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 1 3 3 80 2R 19279307 19279325 CATTCCCAAGGACTCCGAG 59 19279178 19279266 TACAATTTGTTGATGGACACCG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072239 2 1 2 108 2R 19703116 19705583 GTGTCGAAAGAGATGACGA 57 19703026 19703044 TTCCTGGAGCTATAGCTGG 58 NA Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 3 2 2 117 2R 19868163 19868181 CGGCCATGAAATGACACTG 59 19868261 19871078 ATGTTTCTTGGTTCGAGTCG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 2 3 3 81 2R 20308344 20308878 CTTATGAGCGGAACTATACATTGG 59 20308286 20308304 GTAGAGGTCAGTTGCTGGG 59 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700 1 2 3 90 2R 20303187 20303426 CTTGAACAGTGATCGCACG 59 20303115 20303133 ATACATGGGACTCTTCGGC 59 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 1 2 4 80 2R 20443081 20443813 CACCGATTATGCAAGAAAGAC 57 20443853 20443873 TTCCTCTTCGGGTATTAACAG 57 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867 2 1 2 132 2R 20464512 20464531 GCGAATAACATGACGAAACC 58 20464625 20464689 GAAGAGTCAACCGACTTGTG 58 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 1 3 6 80 2R 20818298 20818316 GTGGCTCTGTTTCATTGGT 58 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 1 3 6 80 2R 20818298 20818316 GTGGCTCTGTTTCATTGGT 58 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 2 3 4 87 2R 10510501 10510703 GCAATTAAGACCTGTGCCA 58 10510924 10510943 GGATTAAGCATCTGGGTCAC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 2 9 9 80 3L 143206 143522 TTTGTCCATACGCCAAATCG 59 143564 143583 GTTCTCAATAGCTTCCGACC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 1 5 9 89 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136024 136042 AACATTCTGCAATGCGGTG 59 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 3 2 2 84 3L 594777 594795 ACATACGATCGGTGTCCAG 59 594842 594931 GTTCCTTGGAGGTTGAAGTC 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 1 6 6 80 3L 998875 998894 CCGAATACATAGTCAGTGCC 58 998722 998833 AGTTACTCAGATCCAGACGA 57 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 2 2 2 82 3L 1435039 1435058 TACTTGAAAGTGGTGTGCCT 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 3 2 2 80 3L 1557834 1557852 AAGCAGCCTCAATCCTCTC 59 1557698 1557793 GCTGTTGGTATGTAACTCACTG 59 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 3 5 5 99 3L 1743821 1743909 GAACTTGACAAACGGAGCTC 59 1743971 1743989 GAGCAGAACAGGATCCCAG 59 NA Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 1 2 2 80 3L 1749646 1749727 TGGATAAGGAAGGAGTGCG 59 1749771 1749789 TCAGGCAGGAATAGAGGGA 59 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 2 2 2 80 3L 2094850 2094934 CTTGCAAGAAACTCCCTACC 58 2094789 2094809 CCATTTGGGTTAGAGCATCTG 59 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072849 3 1 2 80 3L 2046158 2046293 CCGTATTTGAACGTCCTGG 58 2046096 2046114 CAGGAGTATGAATCGGCTG 57 NA Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 3 2 2 80 3L 2299262 2299769 ACCTAAAGCTGAGTGACCT 57 2299813 2299831 GGCTCATCGAACAGTACAG 58 NA Nonspecific Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 1 2 2 210 3L 2587883 2588095 TTGTCAAGGACATCATCCAC 57 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776 1 2 4 166 3L 2941470 2941490 TTATAAGAATCAGATGCGCCG 58 2941618 2947888 AGAGATTGTGGCCTGTGTC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 1 6 13 117 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593415 3593433 TCATCTCCTCGCGAATGTC 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186,FBtr0073187 1 2 5 88 3L 3718982 3721546 TTAGACTATGCAGGCAGCA 58 3718912 3718930 TTCGCGTATCACAAATGGC 59 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258 2 1 2 94 3L 4180797 4180815 TCAGCTATTGGTACTGCCC 59 4179578 4180741 CAGAAGTTTGTCTTCCTTGGT 58 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 1 5 5 80 3L 4505303 4505415 ACTAAAGTTTGAACAGGTTCGC 59 4505244 4505263 AGATTTGCGATGTCGAACAC 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 1 5 5 80 3L 4505303 4505415 ACTAAAGTTTGAACAGGTTCGC 59 4505244 4505263 AGATTTGCGATGTCGAACAC 59 NA Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 1 2 2 95 3L 4538172 4538264 CTATGTGAAATATCCCAAGGTGG 59 4538319 4538337 AACTTGATGCTCAGTCCGA 59 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 2 2 2 81 3L 5810734 5811006 CCTCACCAGTTCACTTTCC 58 5810671 5810689 CAGGTGCCATTATGGAAGC 59 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 2 3 3 80 3L 6190639 6190719 GCATCAGATGATACAGAAGATTCTG 59 6190756 6190775 AATTGCTCCACAAATCGACG 59 NA Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 2 1 1 69 3L 6325574 6325592 ATTCATGTTCGAGGGAACG 58 6325246 6325264 GGACACGATGATCAGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 3 2 3 98 3L 6741027 6741048 TGAACTCCAATGGAAATCTCCA 59 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 1 2 2 153 3L 7772024 7772042 AAGCCTGAGTACAGAGCAG 59 7771828 7771909 AATGTCCACCTTTAGTTGCTG 58 NA Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 3 2 2 120 3L 8048535 8048989 TTGAACTTGTTGAGAGCCC 58 8048433 8048451 TTTATGGACAGCACATCGC 58 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 1 2 2 80 3L 8082712 8082789 GTAATACGACTACTAGCTTGCC 58 8082653 8082672 AACTCTTGATGCCAATGTCG 59 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 3 2 2 68 3L 8115189 8115207 GTACCTGGATATGTGCTCC 57 8115294 8115312 AATATGGTCAGCACTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 3 5 13 84 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627739 8627757 CAAGTAGGACTCTGTCGTG 57 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0076565 3 2 5 123 3L 8927237 8927519 ATGGCCGTTTACCAGTCTC 59 8927132 8927153 ATCGTCCCAGTAGTACATTAGC 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 1 2 4 108 3L 8960517 8960535 GACGGTGAAGAACATCTCG 58 8960607 8960689 GACCCGACTGTTCTTTGAC 58 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 3 2 4 109 3L 8960517 8960535 GACGGTGAAGAACATCTCG 58 8960605 8960675 AGGATTCAGAGTTCTTTGACTC 57 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535 2 1 3 96 3L 9144596 9144677 CAAACAGTGATGGGACCCT 59 9144518 9144537 CATTCACCGTATTCTCCAGC 58 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 1 2 4 98 3L 9346894 9346914 ACTGGAACAAGATTCAGAAGC 58 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 3 2 4 103 3L 9346898 9346919 ATTGGACTGGAACAAGATTCAG 58 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 3 2 3 141 3L 9721700 9721819 ACCCTGGACTTTATTAGATCAC 57 9721919 9721939 GATAAAGTTGAAGCGAGTGAG 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 1 3 3 101 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 1 1 1 60 3L 10458490 10458508 GTCCACTGTTTCGACTTGC 59 10459303 10459324 ATCGGTAAGACTAAACCAAACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 1 2 2 136 3L 10631790 10632322 CCTAACATTGGTCGTCCTG 58 10632422 10632440 GCTTGAGTATCAGCTTCCC 58 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076264 1 1 3 80 3L 10681686 10681798 AGCTCTTTAGAGGACTTGGT 58 10681840 10681859 CCATGGCCATTTGGTAAGAG 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 2 3 4 119 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032753 11032771 ATTGTAGTTGCCATCCTCG 57 NA Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 1 1 1 60 3L 12130365 12130384 GTTTCTGAAACTCGATGCCA 58 12130461 12130482 AGGTGCAAATGTCTGATTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 ara FBgn0015904 FBtr0075908 3 1 2 182 3L 12579339 12579357 CCAGAATCCCTACCAGAGC 59 12582728 12587276 ACAAGCAATCCTCCGTAGG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 3 1 1 68 3L 14887232 14887252 CTTATAAAGCCAAGCCTTCGT 58 14887061 14887079 CTCTTCGCATCCATATCGT 57 NA DesignNoJunction Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0301510,FBtr0100036 2 4 5 133 3L 15861150 15861671 CCGCCTGTAAATGATGAAGAC 59 15860674 15860692 GATGCTAAGCTCAGGAGCA 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 3 2 7 104 3L 16068850 16069333 GTCGGAGTTCTTATGGCAG 58 16069400 16069419 CATATCGATCGCTTGTGGAG 58 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 1 3 3 80 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665573 16665591 GCAATGGGAATGTCATCGT 58 NA Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 1 1 1 81 3L 16719216 16719236 CTTACCCTCATCATGAAGAGC 58 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 1 3 5 81 3L 16983966 16984120 GAGCACATTCGTAGATGACTC 58 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 3 2 2 84 3L 17045161 17045180 AGTTCATACTCACCGTGTCG 59 17045227 17045831 AAGCTAATGTCAGCCTGGG 59 NA Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 1 2 2 116 3L 17233851 17233869 GATATGATGGGTGGAGGCC 59 17233699 17233771 GGCAACATCCTTGAAACCC 59 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185 2 1 2 80 3L 17723430 17740792 ACTACGATACAGAATTGCAACG 59 17740830 17740851 ATTCGTGTTAGCCATATTGTCG 59 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 2 3 3 83 3L 17873846 17873865 GATCGTCACTTGGGATACCT 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 1 4 4 80 3L 18824238 18824261 GGAGTACTGTAATCTACACAAACG 59 18824117 18824199 CCAAAGTGTAATCTGCGGG 58 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 3 4 4 80 3L 18824236 18824260 GAGTACTGTAATCTACACAAACGTC 59 18824116 18824198 GCCAAAGTGTAATCTGCGG 59 NA Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 3 2 2 60 3L 19612347 19612365 GTTCGAACTCACGTTCGAG 59 19612385 19612407 GATCATCTTCCACTCTAGATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 1 4 4 109 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 2 4 4 110 3L 19620620 19620639 GGTGTACGAGGATAAGTTGC 58 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 3 3 3 80 3L 19719797 19719815 TCACTGGCGATCTCAAGAC 59 19719595 19719756 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089594 2 1 3 80 3L 19810792 19810867 CACTCTAGCAATATAATGGCCG 59 19810733 19810754 CCATAGCTGGTAAATTTCTGGA 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302713,FBtr0302716 2 3 5 152 3L 20149087 20151587 CCAATGTGGTATCCAGTTCC 58 20148881 20148899 GTGTAAAGCTGAGGTTCCG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 1 2 3 128 3L 20998177 20998195 ATAAACCGCCACAGGACTC 59 20995287 20998085 TTCCCAGATGTTTGGTGCA 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0301602 1 1 4 112 3L 21041880 21061820 AACGAGATTTACTGCTTTCCC 58 21061894 21061912 CTATCTGTGCAGGTGGAGG 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 3 2 2 73 3L 21807934 21807953 CATTTACATGTGAAGGCTGC 57 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914 3 1 2 91 3L 22268526 22271929 CATTCGTCAGTCTATCGGAG 57 22271982 22272001 GTCTGAAACGTAAAGACTGC 57 NA Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 2 1 2 80 3L 22859044 22860504 GATCAAACCAAGAACAAATCGC 59 22860541 22860563 TCAGTCGTCTAGTATCTTCTTGG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946 3 1 2 156 3R 252617 252635 TCTGAGCCGATATTCTGGT 57 252356 252447 GAAAGTCGTTGTAAATCAGCAG 58 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112567 2 1 2 80 3R 320707 320725 GATGAACACCTTCTGGCTG 58 320258 320664 GACTCATCCAAGCCAATAGG 58 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 1 2 2 85 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748534 748677 AACAAATACCTGGTGTACTCCT 59 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 2 3 3 89 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210504 1210522 TATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0113409 3 1 3 203 3R 1312414 1312432 CTGGAGGCTATCCAGATGC 59 1312598 1313567 CATAAAGAAACCTTGTGGCG 57 NA DesignRelaxed Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 1 2 2 89 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418643 1418662 ACTGATTCTTGGTGACCTCG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 1 3 12 91 3R 1586674 1587376 TTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 3 4 4 134 3R 1643901 1643980 GTCAACATGGACACAACGA 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682 1 1 2 92 3R 2467549 2467632 GCGACGCTAACATAAATGCT 59 2467681 2467705 GAGGAACATTATCCGTGTATAATCC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 3 6 11 80 3R 2724255 2734247 GGTAAGTGTCAAGAACGCA 58 2724193 2724214 GAAGTGAAACTCCTTCTCTAGC 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300493 2 1 9 109 3R 2927811 2937692 GCCACCAATTCAACGTACC 59 2927720 2927738 CAGTTACCGCAATGGATGC 59 NA Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 3 1 1 284 3R 4169502 4169521 GAAACTGTTTCTCTTTGCGC 58 4169823 4169841 ATACATCGCCACCTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 1 2 2 72 3R 4171069 4171087 CTGTTCTTAGGGCGAAAGC 58 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 2 2 2 156 3R 4174325 4174344 CCAGCAAGTCCTAGAAATCG 58 4174517 4174535 ATCCAACTCCTGTCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986 1 1 2 174 3R 5066799 5066881 CTTTCAACTATGGTGCCCG 58 5066643 5066661 ATCAGCAGATCCGTGATGG 59 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986 3 1 2 176 3R 5066801 5066883 GGCTTTCAACTATGGTGCC 59 5066643 5066661 ATCAGCAGATCCGTGATGG 59 NA Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 1 1 1 122 3R 5878494 5878512 ATGTAGAGCGCCTTCTGTG 59 5878333 5878351 GATAGAGTTTAAGGCGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300078 3 1 3 123 3R 6639314 6639987 TCAGAGCAGCAACCTACTG 59 6639209 6639228 AAGTAGTCCAGTGCCTTGAG 59 NA Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 2 2 2 282 3R 7041669 7041687 CTAAGAAGGACGCGAAGTC 58 7041337 7041423 TTGATCAGACCCTTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 1 2 6 89 3R 7419479 7429872 AAAGAAGAGGGTGCTGAGG 59 7419408 7419426 CGATTCTTCACGTTCCTGG 58 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 3 2 3 80 3R 7642965 7642983 GTTCAGTTCGAAAGCCAGG 59 7642467 7642924 TATCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 1 2 2 80 3R 8812087 8812107 ATTCACAAGAACACATGGCTC 59 8812148 8812225 GGAGCACTCAGATTTCTTGG 58 NA Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300072 3 1 2 83 3R 8869546 8869564 GGAGCATATTGTCGCAGTG 59 8869680 8869943 TGCTCTTCCTATGGATGCT 58 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657 1 1 2 188 3R 9090849 9090867 GATCCTACACGAGGACTCC 58 9091019 9091477 TTGATTTCGTTGTCGGCTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 3 2 2 91 3R 9513947 9514078 ATATGTCAGGTGCAAGGCA 59 9514133 9514151 TCCGACATGTCCTCAAACC 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 3 3 5 93 3R 9582301 9582319 AATCATCAGCAGTTCCGGA 59 9582374 9582621 CATCCAAGTTCCTGATCTGAC 58 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112631 1 1 3 100 3R 10230784 10230802 GTTCTTCAGGAGCTTCTCG 58 10225504 10230722 CTTCGATTTCTGCAATCTTGC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 2 3 7 96 3R 10651024 10651043 CTCTGTTTCCGAGGATTCTG 58 10650886 10650965 TTTCTTTGTGGGCTGAGTG 58 NA Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 3 2 2 80 3R 10717531 10717550 TCAACACATGCTACAAGGAC 58 10717593 10717685 TGAAGAGCATATCCTCGCA 58 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112668 2 1 3 104 3R 11192307 11192393 CCATAAACGTTGAGCAACTG 57 11192222 11192240 CTGTGTTGCTCTCAGTGAG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 2 5 8 102 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216,FBtr0083215,FBtr0100595 3 3 3 80 3R 11827977 11827996 GTTCATTGGTGACCAATTGC 58 11828036 11828140 GTGGTTTCATATCGTCATTGAC 57 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110973,FBtr0110974,FBtr0083229,FBtr0083231 2 4 6 96 3R 11916204 11916224 CAGAGCTTGATATTCATGGGC 59 11915531 11916147 TATTATAGGCACCAGCTGCC 59 NA Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 1 2 2 80 3R 12852569 12852587 TCCATCGGTGCTGAATGAG 59 12852629 12852711 GACAGTAGATCCAAACGACCT 59 NA Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 3 2 2 166 3R 12959026 12959045 TGCAGAACCAAGATGATGTG 58 12959174 12959257 ATACACATCCGGATAGCCA 58 NA Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 2 1 1 202 3R 14046277 14046295 CTCCAGAGTTCGACATTCC 57 14045907 14045928 GGAAAGATTCACACTAATAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 3 2 2 125 3R 14100747 14100765 GAGGACCAACAGGAGTACG 59 14100854 14107424 AATCCACACCTTCTTGCGA 59 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 3 2 5 131 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750905 14750923 TCAATCAGATCCTCCTCGG 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0083765 3 1 8 155 3R 15307985 15308003 CGAGATGAAGACCACCCTG 59 15308368 15310775 GTCATAATGCGACTCACGAC 59 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 2 2 2 86 3R 15477480 15477504 GCTATTCAGTAGCATTAGCAATAGG 59 15477547 15477678 ATTCCTGTCCTATAGCGCAC 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 3 2 3 117 3R 15677633 15677757 CCCTGGAGAACTATGTAAACG 58 15677833 15677854 AAGTTATCGTAGTTGATCACCC 58 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0083872 3 1 2 149 3R 16122211 16124113 AGATCTTAGAGCTGCCCAC 58 16124225 16124244 ATGGCGAAGAACATCTTCTG 58 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 3 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 1 3 3 106 3R 16526040 16526323 TCTTCAAGGTTTGGATATTCGG 58 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 3 3 3 113 3R 16526402 16526420 AAGTTGAGGAGTGTGACGA 58 16526045 16526328 TATCCAAACCTTGAAGACTTCC 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 1 2 9 80 3R 16794198 16798905 GTCAACGAAAGGTTGATTTCGA 59 16798944 16798964 GACGAAGTACACAAAGAAGCC 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517 1 1 4 60 3R 16894727 16896003 GAGTCCTGGATCAAGGAGG 58 16896027 16896045 CCGTAAGAGTGACCAGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084062 2 1 22 81 3R 17190711 17200796 ACACAGAGGCTCAAGATGG 59 17190648 17190670 CTATCAGTTACTGGTTTCCTTGG 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 2 2 5 182 3R 17351005 17351023 ATCCATCGTTACGACCAGG 59 17351167 17351263 CGCGCCAAATAATAAGAAAGG 58 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0299852 2 1 2 81 3R 17594573 17594591 AGGAGAATCCTGACTTGGT 57 17594636 17594740 TCCCGACCAACTTTATACG 57 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 2 4 6 90 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615473 17616439 GCACGAATATAAGCACCGG 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 1 2 6 104 3R 17643797 17643881 GGTTATCGTTTGAAGCACC 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077 3 1 2 107 3R 17701345 17702307 TATCCATAATGAGCGCCCA 58 17702378 17702396 GAGATAGCGTATTGACGGC 58 NA Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 1 2 2 134 3R 17844428 17844509 GGGCTACGGATAACTACGG 59 17843785 17843803 AGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 3 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 1 2 2 80 3R 18274274 18274292 TAGTGCTGGCTATCTGCAG 59 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 1 4 4 146 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 3 2 2 92 3R 19519809 19519828 GAAGATGTCGATTCGCTGTC 59 19519575 19519754 CAGACCAATCGACTGTTCC 58 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 3 2 2 90 3R 19770504 19770746 ACACCCAAATTACTAAACGGC 59 19770434 19770455 GCAGCTTATTGTTGTATCTGCA 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 5 6 80 3R 20045866 20045947 AGAGATTACTGGCTGCGTC 59 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 1 4 6 91 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 3 2 2 110 3R 20358516 20358594 CCAACCGATGCTAACATTATACC 59 20358664 20358682 GATAATGGCTGGTCGAAGC 58 NA InUTR Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 1 3 18 98 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527818 GGTGTTCATCTAAGTCATCGA 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 1 3 18 80 3R 20521838 20528850 CGATGACTTAGTACTCAATCGC 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 3 2 2 162 3R 21053857 21056365 GTTTAATAAAGCTACTCTGGGCG 59 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302096 1 1 10 109 3R 22402352 22404454 CTTATCAGTGAGGTTGTGCTG 59 22404525 22404543 AATATGCCAGGCTCTCGAG 59 NA Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 1 2 2 93 3R 23212947 23214186 GAATGATCAGGCGACATCTG 58 23212873 23212891 TTGATATTCACGTCCCGGT 58 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 3 5 5 81 3R 23392371 23392392 CTTGCGATTCATTTACGAAACG 59 23392247 23392331 GAATCCGTTGATGATACTGCC 59 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 3 5 5 149 3R 23529755 23529774 GATCCGATGTACACCAAGAG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 2 5 5 127 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529568 23529643 TAATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085308 2 1 3 190 3R 24501400 24515945 AGTGCCATTATTTCCACAGAC 58 24516097 24516115 TTCAGGTTGTTCAGCACCT 59 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0085308 1 2 3 96 3R 24518606 24518624 CTACAAGTGCATCAGCCTG 58 24518681 24518867 GATGTTGTTACTGAAGTTCACG 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 3 5 6 83 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639721 24640881 GCGCTCAAACACCTTATAGC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 2 2 4 86 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698012 24698248 GTCAACTTCAACCTGCAGG 59 NA Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 1 1 1 146 3R 24943578 24943596 ACTAATCGGCATCGAGACC 59 24943768 24943786 ATGGTAGACTGCTGGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 1 5 10 116 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 1 3 3 86 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975351 24975369 TTGAAGTTCTCGTCCAGCT 59 NA Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 2 2 2 85 3R 25065066 25065140 ACCGGCAAAGATGATTTCC 58 25064999 25065017 GAATAGGCGACCAGGTAGG 59 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 2 2 2 100 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628321 25628340 GATTCATCGAGTGCTTCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 3 4 5 82 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653706 25653804 GTGTTCGTTTGTAAACGTGG 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 1 4 6 80 3R 25723356 25727912 CGGAAGGAAATGAACGGAC 58 25727953 25727974 CTCTTGGATCGATTCGTTAAGC 59 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 3 2 2 81 3R 25777672 25777690 GGGAGAATCTGACATCCCG 59 25777545 25777630 ATCGATTTCTGGGTATCATTGC 59 NA Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 2 2 2 131 3R 25817723 25817812 TATTTGAGCTGCACAGTCCT 59 25817611 25817629 CAGGTATGTCCAGAGGCAG 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 2 5 5 81 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871275 25871293 GGGCATCAGATACTGTCCC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 8 13 154 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419562 26420548 AGTAGAGTTTCTGGTCGGT 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 1 4 13 196 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 1 4 13 196 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 1 2 2 112 3R 26877547 26877565 TTTAATGGTTACGCGCTCC 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046 2 1 2 81 3R 27186210 27186230 TACGAATGGTAGTGGATCTGG 59 27186270 27186404 CGTGCTTTGATAGTAAAGTCCC 59 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 1 2 2 80 3R 27215546 27215564 CGATGTTGTACCTCACCGT 59 27215608 27215683 CCACACCGATACTCAACCA 59 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 2 3 3 80 3R 27398816 27398834 TCCAAGTTGGTCAACAAGC 58 27398876 27398993 CTTACAGGCAATGCGTATCAG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 3 3 6 80 3R 27554134 27554155 CTCGAAACGATCAAAGAACTCC 59 27554193 27558654 TTAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342 1 1 4 89 3R 12570423 12579407 GCGTTGAGCACATTATCAC 57 12570352 12570370 GGTGGAACCACAAGTACAG 58 NA Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 3 1 1 64 3R 26038647 26038668 TGTTTGCTTTCATCATCCTGAC 59 26038693 26038711 TATATCCGTCAGCCAACCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 1 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261449 263095 CATCATTCCCTTGAGATCCA 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 1 5 6 198 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 2 2 5 145 4 886674 886692 CTTGTTCGATCGGAACTGC 59 886489 886566 CAGGACGAGAGTTATTGCCA 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 3 6 6 101 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974432 974452 ACTGAAGTAGGAGTAAATGCC 57 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301335 1 1 2 80 4 992713 992734 AAATGGCTTCTATATCTGTGGC 58 986256 992673 CGGAGCTTACGTGATTTGAC 59 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 1 4 4 121 U 1092307 1092326 CCAGATCTAAGTTGCGATCC 58 1092152 1092226 TAAAGAGAATTCACTGCTCGAC 58 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 3 4 4 122 U 1092306 1092326 CCAGATCTAAGTTGCGATCCT 59 1092151 1092226 GTAAAGAGAATTCACTGCTCGAC 59 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 3 2 4 81 U 1352553 1352571 CAAATTCGTGGTACGACGT 58 1352614 1352686 TTTGAATAACCGTCCAACCTC 58 NA Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 2 2 2 80 X 94983 95065 CCTGAAGACACTCCCTATGG 59 95106 95126 GATGATCTTAAAGCTGGTGCG 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0290017 2 2 8 174 X 394999 396028 ACTTGTTTGGAAGGCAACTG 59 396162 396183 TGCTAACGATCCAATTTACCAG 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 85 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398965 TAATCGCCCTCAGATAGCTC 58 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 2 3 3 156 X 927433 935032 ATATGAGTATCCTCCGAGCAC 59 935150 935168 CGTTTCGCACATTGTAGGG 59 NA InUTR Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070176 1 1 3 99 X 935428 936304 GATTGACAGATACGATGTGCG 59 936365 936383 CTCGGCACTCAAGTACTCC 59 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 3 3 3 95 X 1376771 1376789 GTCAACATCCTCAACCTGG 58 1376502 1376712 GATGACGAAGATGTCCGAG 57 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 1 2 6 171 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387283 1395835 GTGCTTAGAATTGCCGTCG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070266 2 1 9 88 X 1531147 1531166 CAATATCGATCCCTCAGCGT 59 1531361 1537112 CACTTGTGATGGCTTGAGG 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344 1 1 3 80 X 1922769 1924256 ATCCAGATGATCTCCAGAATACAG 59 1922712 1922732 TGAAGCAGTGATAGTACGAGG 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458 3 1 3 186 X 2341620 2341697 TCAGAATTCGAGCATGGTG 57 2341452 2341470 GATATTGTCGCTGGTCGTC 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 96 X 2567052 2567070 TTCTTCGATGAGCTACGCA 59 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 1 4 4 80 X 2816307 2816325 TGAGTCCCTTGGAAAGACC 59 2816369 2816460 CTCCACCGAATTCTCCTCC 59 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 3 2 2 260 X 3685572 3685591 TATCAAGAAGATTGTGCCCG 58 3685814 3685832 TCTTCTTCACCGCACTCTG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 1 2 2 101 X 4570357 4570375 AAGCACTACAGTCCTGTGG 59 4568640 4570292 GTTGTTGTACGCTCTGCAG 59 NA Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 2 2 2 80 X 6575397 6575479 GGCTATTGTCTGATGGCAG 58 6575523 6575541 TCTTGGCAATATTCTCGCG 58 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 3 2 2 80 X 6735770 6735869 TCCTTCAATGGTATCAAGTGTC 58 6735711 6735730 TAGGCACATGACTAAATGGC 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 1 4 21 110 X 6981688 6986743 TTTAAGATGGCGAGTGGTG 57 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613 1 1 3 174 X 7555006 7555024 CTGAATGTGCTCAGTCCGA 59 7555162 7556153 GGTTGGTTTCTTCGCTGAG 59 NA Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 1 1 1 169 X 7769568 7769586 GAGGCAGAAGCATTCATGG 59 7769815 7769833 TAGATTCACCTCGCCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 1 6 6 115 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 1 2 2 239 X 8143399 8143417 ATCTACGTGAACACGGAGG 59 8143119 8143197 GGATTTGCTAATAGTGCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 2 4 4 80 X 8458342 8458361 GAGATCTTTGGCTCCTTTCG 58 8458402 8458530 CTTCTCCCACAAACCTAACAC 58 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 1 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466339 ACCTTGTTCAGTTCATTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 1 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466339 ACCTTGTTCAGTTCATTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 1 4 6 92 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 2 3 5 93 X 8994610 8994630 AAGGGCGAGATAAATTTCCTC 58 8992438 8994557 TGTCCTGATCTAGATGGATGC 59 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0071429 2 1 2 85 X 9858452 9858471 AGCTTAATGAGCTACAGGGA 58 9858315 9858404 CAATGGGCGAAGTAACCTG 58 NA Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 2 1 1 60 X 10220789 10220810 GGCAATGTGATTAAATTGTCCG 59 10220895 10220913 CTTTGACACTGTTCACGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390 2 1 2 80 X 10942619 10942982 AGAACTTTCTCCTTAGATATCGGG 59 10943019 10943039 TCTGGCACAAGGAATATTTGG 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073486 3 1 15 137 X 11284560 11288260 TCAATCTGGATTCGCTCCA 58 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 1 4 15 93 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299368 11299386 TCCCAGAATAATCACCGGG 58 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 1 2 2 88 X 11349145 11349163 GCCGCAAACTATTAATCCG 57 11349215 11349323 CCAGGAGGTCATTTACGTC 57 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0073522 1 3 4 156 X 11567285 11567303 GTATATGCCATGCGCAAGG 59 11567485 11567772 CTTGTTGGCCTTCATAGCC 58 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 3 3 5 198 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607536 11607554 TACTCGAACTGTTTGGTGC 58 NA InUTR Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568 3 1 2 81 X 11763310 11763329 CCCATACGAAAGGAGATCCT 58 11763370 11763500 TATCATGAGGAGTGAGTCTCCT 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 2 4 4 70 X 13100773 13100791 CTCCGATTTCGACGATGAC 58 13098160 13098178 CTGTGTTCAAATCGCGACC 59 NA DesignNoJunction Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 1 1 1 104 X 13509709 13509730 AGTACTTGAGCAAGATGTACAG 58 13509370 13509388 TGCTCAGTCCCAGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 3 4 4 80 X 13696194 13696279 TCTCAAGAGCTTGGTTATCCT 58 13696321 13696339 GCAGTGGTGTAGTAATGCC 58 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 2 3 3 80 X 14142420 14142579 GAATTCCTAGCACATAACTATCCC 59 14142617 14142636 GTAAAGGCAATCCAAAGGCA 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 1 3 3 80 X 15276621 15276641 CTCTCCATGAACAACATACCC 58 15276371 15276581 ACTATGAAAGCTGGGAAACTC 58 NA Nonspecific Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0289961 1 1 2 186 X 15569824 15570402 TACTTAAGTGCCTCACCCA 57 15570552 15570570 TTCCTCTTGAGTTTGCCAC 58 NA InUTR Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 1 5 9 129 X 15714511 15714529 CAGGAAGCAAGTCAGTTCG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0074102,FBtr0113440 1 2 2 86 X 15730228 15730322 TCTTAATCTATGAGGGCATGAC 57 15730369 15730387 AAGACTACCGCAAATCTGC 58 NA InUTR Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299949,FBtr0299951,FBtr0299950 3 3 3 81 X 15989516 15989534 GATTTAAGGCCGAGCAGTC 58 15989389 15989407 CATCTGCCTGAGGATCCTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 2 9 9 80 X 16273082 16273101 CCATTTGGTTATGCATGAGC 57 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 3 9 9 80 X 16273082 16273102 CCATTTGGTTATGCATGAGCA 59 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 3 2 2 80 X 16545984 16546007 CTATGTACTATTCCACTCGTTGTG 59 16546045 16546126 TCGCCGTATGGTAATTTGAC 58 NA Nonspecific Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 2 2 2 80 X 16576146 16576245 CTCCACGATATCCTGTATCTCG 59 16576087 16576105 GTAGTTCCGGATGTCCTCG 59 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 3 4 4 80 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198159 17198177 GATCTTCATCGAAGGCAGC 58 NA Nonspecific Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970 3 1 6 81 X 17784634 17784654 GATCAAAGTGGACGAGTTCAC 59 17784695 17791229 AGTACGAATCTGGGTGAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074580 1 1 2 117 X 18209705 18209723 TTCTTGGAGCGACTACAGC 59 18209361 18209624 TGGAGGTAGAAATGCGACC 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074554 3 1 9 67 X 18266497 18266515 AACTGTCGAGTGTCAGGTG 59 18266546 18267081 TATCACGGACTGCACATCC 59 NA DesignRelaxed Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 2 2 4 113 X 19040168 19044854 AGGAGGACATGATTGTGCC 59 19040073 19040091 AGACGCTCTTATAGCGCTG 59 NA Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 3 1 1 81 X 19072087 19072105 GATGACGATGCAGTTCGTC 59 19071947 19071965 TCAGCTCGGTAAGATCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 1 2 2 60 X 19173016 19173036 GTCTACCTATTTGAGCTGGGA 59 19171980 19171998 CTCCAATGGCGATAATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302859,FBtr0302861,FBtr0302860 1 3 6 172 X 19418033 19418052 AATCCATAGCCAGTTTGGTC 58 19418186 19419220 GGCGATTATCTTGTCATCGT 58 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 3 4 5 80 X 19905586 19920747 CTACTTTCTGGTAAATGGAGCC 58 19905527 19905548 GTAGAGCATATCACATCCATGG 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 2 2 8 84 X 21251053 21251071 GAAGTCCAGCTTCTACGGA 58 21251119 21251693 GCCAAAGGATCTTAGCCTC 58 NA Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 2 1 1 71 X 21847966 21847984 TGGCTTTACATGGACAGCT 59 21848372 21848393 GGCAATAACTCGATAGTCTAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 1 5 5 101 X 21868784 21868863 GATACTCCACGAATTTGCCA 58 21868927 21868945 CGATGTTTGGTCGAGAACG 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 2 3 5 95 X 21860082 21864240 TACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 snmRNA:430:CR33729 FBgn0053729 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:22Fb FBgn0012017 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:35Bb FBgn0028911 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Ae FBgn0011935 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30212 FBgn0050212 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30209 FBgn0050209 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-137 FBgn0082181 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M2:83F FBgn0011919 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:D FBgn0013691 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:N FBgn0013701 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Ppr-Y FBgn0046697 FBtr0113889 2 1 1 80 YHet 192005 192023 AAGACACAATTGCGACTCG 58 192063 206139 GATGTCGTTCCACTTCATTACTG 59 NA Drosophila melanogaster 61 kl-3 FBgn0001314 FBtr0113756 3 1 1 89 YHet 63545 63563 TTGGAATCCCGCATTTAGG 57 63615 63784 TCTTCTAATTCTTTCGCGCA 58 NA Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073514 1 1 2 137 X 11473146 11473709 TCGAGCGTTTAGGTAGCTC 59 11473809 11473828 CGGAAATCGTTACTCTTGCT 58 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100650,FBtr0077353,FBtr0100652,FBtr0100651,FBtr0077352 2 5 5 186 X 21884787 21884805 AGTGGCTCTAGTTCCATGG 58 21885019 21885037 TTCTCCTACTGGCCATGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14613 FBgn0031188 FBtr0077367 2 1 1 80 X 21873120 21873200 ACTACCTGTCAAAGAGTGGC 59 21873059 21873080 GCACCTTCTCAATGATGTTCTC 59 NA Drosophila melanogaster 61 CG14615 FBgn0031184 FBtr0077369 1 1 1 76 X 21850382 21850401 CCTGGATCTTTCAGAACGAC 58 21849930 21849948 ACCTAGTCCTCTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11566 FBgn0031159 FBtr0100609 2 1 1 98 X 20981364 20981498 TCTATGTGGTGGGAGACCA 59 20981560 20981578 GATTCGAGTTCAGTCTGCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1314 FBgn0031134 FBtr0077286 3 1 1 60 X 20739371 20739393 AGTTCACCATTCTAGAGGATGAG 59 20739333 20739352 CCCTCATTAGGATTAGGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17068 FBgn0031098 FBtr0077341 2 1 1 60 X 20120079 20120099 CTGGTATCCCATGTACTCCTG 59 20120039 20120057 GAACATGAACTTCACGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12788 FBgn0031041 FBtr0100291 2 1 1 60 X 19512468 19512486 CTAGCTAAACGCAACTTGC 57 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14220 FBgn0031036 FBtr0074768 1 1 1 80 X 19495538 19495655 TAGCGAAGAAGACACGGAC 59 19495476 19495494 TTGGAGGTCCCATTCATGG 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 1 4 4 80 X 19236629 19236777 GTACTGATGTACAACAGTGCC 59 19236569 19236587 ACAGCTCCCATTATTGCGA 59 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 2 2 2 127 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092799 19093310 GTATAATGTTGTAGACGCGGC 59 NA Drosophila melanogaster 61 CG15882 FBgn0030983 FBtr0074703 3 1 1 60 X 19018198 19018216 AATGATGTCGACATTGCCG 59 19018156 19018177 CTTCCTTCGAAACAGATTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 3 2 2 101 X 18734582 18734673 ATCATGAAATCAACCGTGAGG 58 18734736 18734754 GTAGTAGTTCGCCTCGTCC 59 NA Drosophila melanogaster 61 Ing3 FBgn0030945 FBtr0074614 1 1 1 90 X 18546958 18546976 TCTGGAGATGATCGAGCAC 59 18546810 18546904 GTCCATGTTGTTCTGGACG 58 NA Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074585 2 1 2 60 X 18153218 18153239 GGGTAGGTCCAAGATAAATCTG 58 18153179 18153199 GATTGCAGTACTGCTACTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 2 3 3 80 X 18027216 18027296 CATGTCATGGATTGAGGTGC 59 18027155 18027176 TACGTGTACATGAGAGTCTGAC 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 1 5 6 85 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173825 17173843 CTTCTTGGCCATCATCTGG 58 NA Drosophila melanogaster 61 CG5070 FBgn0030824 FBtr0074389 3 1 1 60 X 17097258 17097276 GTAGTTGCGATGGTTTCCC 58 17097298 17097318 GAAGATTAAGCTTGCCAAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9125 FBgn0030793 FBtr0074352 3 1 1 107 X 16696669 16696687 GAGGCAGAGGAGTTCATGG 59 16696493 16696599 TTTGAAGTCAACTGGCTCCT 59 NA Nonspecific Drosophila melanogaster 61 mRpL22 FBgn0030786 FBtr0074330 3 1 1 90 X 16678367 16678460 CCAGAAATGCTTATGTCTGCC 59 16678512 16678530 GACATTCCGCGAACAAAGG 59 NA Drosophila melanogaster 61 CG15865 FBgn0015336 FBtr0074375 2 1 1 192 X 16558029 16558048 CCAATTGCTTCTGGGTATCC 58 16557727 16557874 TGGACTCTTCGAAGATGGC 59 NA Drosophila melanogaster 61 TH1 FBgn0010416 FBtr0074305 1 1 1 97 X 16283898 16283987 TTGCATCAAATATCCTGTGGTG 59 16283822 16283840 GACAGCTGTCTGTGGAGAG 59 NA Drosophila melanogaster 61 CG8959 FBgn0030691 FBtr0074192 2 1 1 124 X 15676030 15676689 TTAGCTCGAGAGTTCGAAGG 59 15675925 15675943 TTGTTTCCAGTGTTCAGCG 59 NA Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 1 1 1 65 X 15660250 15660343 AGATAATCGCATAGTGTCCG 57 15660204 15660222 TTCAGTATGACCTGCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Tcp-1zeta FBgn0027329 FBtr0074086 1 1 1 83 X 15640867 15640885 ATCAATATCAGTGCCGCCA 59 15640929 15641350 AGAAACCAACATCTTAACGGTG 59 NA Drosophila melanogaster 61 Actr13E FBgn0011741 FBtr0074203 2 1 1 60 X 15630466 15630485 GCTAATCTCTTATCGCCACC 58 15630425 15630449 CTTGATCTGGTTAACTACATGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gce FBgn0030627 FBtr0074004 2 1 1 88 X 15210005 15210165 ATGATATCATTCTGACTGGCTG 58 15210212 15210232 TTTGTACTCCAGTGTATTGGC 58 NA Drosophila melanogaster 61 Tango2 FBgn0030503 FBtr0073807 3 1 1 80 X 13512426 13512639 TCGAAATTGGATCTGCATCC 58 13512682 13512700 CGTTCTGGAAATCCTCCAG 57 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 1 2 2 245 X 13502356 13502442 AACTAGCACAAACCATGCA 58 13502648 13502669 TCTGGAATGTAACTGAGATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG15747 FBgn0030474 FBtr0073766 1 1 1 60 X 13233287 13233308 AACAACATAGATGCCGATTCTG 59 13233329 13233347 TCTCGTCTTCTTCATCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15717 FBgn0030451 FBtr0073723 2 1 1 207 X 13023169 13023187 GGATCACCAGCTACATGGT 59 13023475 13023493 CTCTCCTGGAGTAGCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12714 FBgn0040862 FBtr0073744 3 1 1 208 X 13005846 13005866 CCTTTACAGCTTTGAATCGCA 59 13005438 13005677 TTTCTTCATCGGCTTCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12715 FBgn0030443 FBtr0073750 1 1 1 69 X 12949184 12949202 ATATCACAGCCAGCATCCC 59 12948758 12948776 TATCGATTCCTGGATGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32643 FBgn0052643 FBtr0073716 2 1 1 60 X 12878796 12878814 GCACTTCCTCTACGTAGTC 57 12878838 12878856 CCCGTAGTAACGTATGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3775 FBgn0030425 FBtr0073690 2 1 1 60 X 12696700 12696721 CGAATTGCGATTACATGATGAC 58 12696741 12696760 CTGTTCCAGGCAATGATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 3 2 5 87 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483125 12483144 CGAATCACTAACTGGTGTGC 59 NA Drosophila melanogaster 61 CG2577 FBgn0030384 FBtr0073643 3 1 1 60 X 12267996 12268016 AGATCTCGGTAAGCATTGAGG 59 12268036 12268056 AAGTACATTGTGAACTCGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1492 FBgn0030361 FBtr0073579 3 1 1 73 X 11904716 11904735 AGTTTCAGTGACAAGCTCCA 59 11904591 11904609 TAAAGATGACACCTGTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Or10a FBgn0030298 FBtr0073548 1 1 1 80 X 11310565 11310643 CCCTACACTGATCACTTGGA 58 11310504 11310525 GTGCCTAATGATTACTGATCGC 59 NA Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 1 2 2 80 X 11040019 11040038 GATATCAAGGATCGCAAGGT 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 CG15203 FBgn0030261 FBtr0073392 2 1 1 85 X 10960950 10961814 ATACTTATCGAGGGTTGCGG 59 10961862 10961880 CATTCCGGAAAGGGTTCAC 58 NA Drosophila melanogaster 61 Rab9Fa FBgn0052671 FBtr0073402 1 1 1 60 X 10844898 10844919 TTTCTCGGATAACCAATTCACC 58 10844859 10844877 CTCCCTTCTATCCAAGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15209 FBgn0030237 FBtr0073378 1 1 1 60 X 10736606 10736624 CTAACCTACACGGAGCTGG 59 10736648 10736666 CATTGCGATTCTGGGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab9Db FBgn0030221 FBtr0071507 2 1 1 132 X 10517082 10517101 CAATTCACCGAAAGACACCG 59 10516969 10516987 TCAGCAATTTGAAGCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2889 FBgn0030206 FBtr0071450 2 1 1 80 X 10369103 10369122 TCTTTGAGACGGACGATACG 59 10369165 10369244 CTGGTAGGATCTCCAGCTG 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071468,FBtr0302373 1 2 3 60 X 10268305 10268326 AACAATCATCCTTTAGATCGCC 59 10268266 10268284 TTTACCTCCGCAATTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12641 FBgn0030193 FBtr0071443 3 1 1 194 X 10241456 10241474 CAAATCGCATTCCCTGGAC 59 10241631 10241650 CTCTGTAGACACTGTCGGAG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG15306 FBgn0030191 FBtr0071471 3 1 1 84 X 10225511 10225585 ACTTTCTTTGGCTTGTAGACAC 59 10225448 10225466 CGAATTATGCGTGACGGTC 59 NA InUTR Drosophila melanogaster 61 CG32691 FBgn0052691 FBtr0071435 2 1 1 61 X 10058724 10058742 CCCTCATCCTGATTCTGGT 58 10058766 10058785 CAATCACGACTGCAGATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071392,FBtr0071391 1 2 2 79 X 9778566 9778584 GATTGGTCCTGCTTATGGC 58 9778627 9778645 CTTGAATTCGCTGTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42569 FBgn0260771 FBtr0301275 2 1 1 80 X 9138111 9138129 AATTCTACTTCGGTGACGC 58 9138170 9138251 CCAATGGTACATATGGATCCTG 58 NA Drosophila melanogaster 61 Ir8a FBgn0052704 FBtr0071333 1 1 1 80 X 9128909 9128928 TTCACATTGAATCCTCGTGC 59 9128778 9128867 ACGTTGCATCGTAAATCCAC 59 NA Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0071284 2 1 2 92 X 8975101 8975208 AGGGATGGTAGAAAGGTTTCAG 59 8975261 8975279 ATGGCAACTCCATGGTCTC 59 NA InUTR Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300001,FBtr0300000 2 2 2 119 X 8946311 8946329 ATTCGTTCCATGCTGACCT 59 8946411 8946491 ACGGGTGATATGAATGTGCT 59 NA Drosophila melanogaster 61 Sptr FBgn0014032 FBtr0071241 1 1 1 60 X 8357954 8357976 TACTACCACTCCAATGTCTTCTC 59 8357916 8357934 TGAAGACGCGCATAAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smox FBgn0025800 FBtr0071192 3 1 1 83 X 8034940 8035677 CCGTTACAGATCAGAAGTGC 58 8034876 8034894 AATACTGGAACGGGACTGG 59 NA InUTR Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 1 6 6 115 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140,FBtr0300899,FBtr0071141,FBtr0300900 2 4 4 116 X 7787304 7787322 ACTGGATAAGCGAGCACTG 59 7787206 7787224 TATAGGGCACTCTTGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 3 1 1 127 X 7769709 7769823 AAATGATGGTCGATGGCGA 59 7769914 7769932 CCCACTCGGAACTACAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir7a FBgn0029961 FBtr0071075 2 1 1 60 X 7659995 7660013 TATGCACATGAGTTCCCAG 57 7660037 7660055 AATGACAGTAAACGGCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 2 2 2 82 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632462 7632482 GAGAGGGTGTAATCACTACCG 59 NA Drosophila melanogaster 61 Rab39 FBgn0029959 FBtr0071072 2 1 1 146 X 7629357 7629803 AAATTCGCCGAGTTATCCG 58 7629913 7629931 CCGGTAGTAGGACTTGGTG 59 NA Drosophila melanogaster 61 CG32727 FBgn0052727 FBtr0071056 1 1 1 103 X 7301442 7301460 TTTAGATCGCCCAACAGCA 59 7301526 7301604 GACATCCGTTTCTGAAAGCA 58 NA Drosophila melanogaster 61 CG3781 FBgn0029853 FBtr0070895 3 1 1 60 X 6155843 6155861 AGTTCCTCGAGTTTCTGGC 59 6155885 6155903 TCCAACACGAGGAATAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rux FBgn0003302 FBtr0070889 2 1 1 105 X 5931001 5931110 AAGAACATAAGGAGACGCCT 58 5930915 5930934 TAGAAGCTGAGGATGCAGTC 59 NA Drosophila melanogaster 61 CG6048 FBgn0029827 FBtr0070863 2 1 1 111 X 5846976 5847251 CCATTGCTTTGTGGATCAG 57 5847326 5847344 GAATGTTAGCGTGTTGGTG 57 NA Drosophila melanogaster 61 CG3033 FBgn0029818 FBtr0070830 2 1 1 106 X 5765451 5765469 ATTCTACCAGTTCCCGGAG 58 5765294 5765382 TGCCATAAATCACGGAATCG 58 NA Drosophila melanogaster 61 CG4064 FBgn0029808 FBtr0070812 3 1 1 123 X 5679020 5679040 CTGGTGAGGGTAAAGAGAAGG 59 5679125 5679209 TTGGACGCCACTATCAGAG 59 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300464 3 1 3 85 X 5536964 5536982 ATCCGAATCCAACCAGGTC 59 5536008 5536026 CTAGTGGAGTACGCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3309 FBgn0029756 FBtr0070798 3 1 1 160 X 5222335 5222353 ACTTCACCATTCACGACAG 57 5222134 5222212 CATGTTCTTCTGGTTGTCCA 58 NA Drosophila melanogaster 61 TrxT FBgn0029752 FBtr0070755 2 1 1 121 X 5205732 5205886 ATTAAAGTCATGGTGTACCCAG 58 5205632 5205650 ATTATCTTGCAAGGTCCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 2 2 3 81 X 3408481 3409291 GTGGAAACTTGGTGTCGAG 58 3409336 3409354 ACTTTAGGCAGAAGTGCCA 59 NA InUTR Drosophila melanogaster 61 CG4116 FBgn0029649 FBtr0070561 1 1 1 60 X 2961288 2961308 TTCAAACACCGGTATCAACTC 58 2961248 2961268 CAGCATATCCTGCTTATTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 1 3 3 87 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678712 2679045 CAGGATTATCTGCAAATAGCGG 59 NA Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 3 2 2 80 X 2629130 2629222 CAGGGATATACTGGATCCGTC 59 2629070 2629088 ATTTCCTGGAACTTGTGCC 58 NA Drosophila melanogaster 61 CG13760 FBgn0040375 FBtr0300707 3 1 1 86 X 2478555 2478573 GACACTATGTGGTGCTCTG 58 2478420 2478505 GACAAATGTGGCCATCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32797 FBgn0052797 FBtr0070461 1 1 1 60 X 2319242 2319261 CTCGATGATTTCGAAACGCA 59 2319201 2319220 CAGCATCAGTGAGGTAACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3071 FBgn0023527 FBtr0070398 3 1 1 106 X 2156928 2156948 GATGCAGAACTCCTTTCTTCC 59 2157016 2157102 GTAGTTCTGGTTTCGCCAG 58 NA InUTR Drosophila melanogaster 61 CG4045 FBgn0025629 FBtr0070331 1 1 1 167 X 1969644 1969712 AGCTTCGACTATCCTGCTC 59 1969495 1969513 GATTTCCATGCCGATGGAC 59 NA Drosophila melanogaster 61 mei-38 FBgn0260986 FBtr0070258 3 1 1 88 X 1371276 1371294 ATCAACGTGGGTGACTACC 59 1371433 1371451 TTAACATTGCTGAGGCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 png FBgn0000826 FBtr0070234 3 1 1 60 X 1250745 1250764 TACCAGACATCTTCCACCTC 58 1250704 1250725 CTGAAGTAATGCTTGTAGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3699 FBgn0040349 FBtr0070186 2 1 1 61 X 840815 840833 TCCAAGGCAAGTTTCACCA 59 840772 840790 GTCAGATTGTGCTTGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0070138 2 1 2 282 X 664208 664226 AACAGAAACCCTGGAGTGG 59 664472 675518 GTTTGGCAATCTGGAGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13361 FBgn0029532 FBtr0070149 1 1 1 85 X 646258 646355 AAATTCACGCTACAAGGGAC 58 646192 646214 CGTTCTCTATGTACTTGGATGTG 59 NA Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947,FBtr0070076 3 2 2 266 X 371707 371725 GAAGCCATTGGTACAAGGC 59 371952 372054 CGATTACCAAATAAAGTCACGC 58 NA DesignRelaxed Drosophila melanogaster 61 pcl FBgn0011822 FBtr0070100 3 1 1 60 X 330621 330640 CTTCCATTAGCACCTTTGCC 59 330580 330602 GGAGCTATAATCAGAGATGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200,FBtr0112920,FBtr0112919 2 3 3 83 X 30944 31033 TTCCTTCAGCAAGGAATTGAG 58 31078 31096 AATGGTGCGTAATATGGGC 58 NA Drosophila melanogaster 61 Kif3C FBgn0039925 FBtr0089196 1 1 1 80 4 1186044 1186062 TTCATCTTTGGTGGATGGC 58 1186106 1186186 CCTAAGGAATCCTGGAGCA 58 NA Drosophila melanogaster 61 Arf102F FBgn0013749 FBtr0089192 2 1 1 80 4 1145315 1145402 ACAGAACATGCTCCAGGAG 59 1145446 1145464 ATTGCATTCGGTAGGTCCT 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305c FBgn0082974 FBtr0113593 2 1 1 60 3R 24429097 24429116 AGTACCCTGACACCTAACTG 58 24429136 24429157 GCGTTTAATAAGCTAACTGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 2 1 1 64 3R 26038648 26038668 GTTTGCTTTCATCATCCTGAC 57 26038694 26038751 TTATATCCGTCAGCCAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301176 3 1 4 135 3R 5377492 5377510 CTCTTTGTCAGGTCGAACC 58 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 1 1 2 60 3R 27887233 27892069 ATCTCAAGCTCCTCTACAGC 59 27887192 27887215 GCATGAGTGTATAATAGAAGGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 salt FBgn0039872 FBtr0300915 2 1 1 99 3R 27579419 27579579 GCTACGAGTATCTTGAGTTGC 59 27579340 27579358 AACATGTACACGGGAAGCA 59 NA Drosophila melanogaster 61 salt FBgn0039872 FBtr0300915 1 1 1 95 3R 27579419 27579579 GCTACGAGTATCTTGAGTTGC 59 27579344 27579362 TGTACACGGGAAGCATCAG 59 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 1 4 4 114 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567645 TTGAGCACAATCACCTGAG 57 NA Drosophila melanogaster 61 CG31005 FBgn0051005 FBtr0085769 3 1 1 90 3R 27066774 27066795 GGCTGGTGATTACATCTTATCG 59 27064198 27066724 GGTCAAGATCTGACTCAGCA 59 NA Drosophila melanogaster 61 CG31007 FBgn0051007 FBtr0085747 1 1 1 60 3R 26817779 26817797 CAACAGGAGGGATCCTTGG 59 26817737 26817755 CCACTAGTTGAGGTTTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 3 2 2 160 3R 26705207 26705226 CAACTGACCTACAACATCCC 58 26704955 26705084 TTGTTGGTGGACTTTGAGG 57 NA Drosophila melanogaster 61 tll FBgn0003720 FBtr0085709 2 1 1 60 3R 26678301 26678321 GGATCAGAAATACAACAGCGT 58 26678342 26678482 ATGGTATAGAATGCGACTCG 57 NA DesignRelaxed Drosophila melanogaster 61 CG34299 FBgn0085328 FBtr0112495 2 1 1 88 3R 26075494 26075514 AAAGGAATCCAGGCAAATCTC 58 26075623 26075992 CTAAATTGGATTTGCGTTTGGG 59 NA DesignRelaxed Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085583 2 1 3 98 3R 25959807 25959981 AACTTCGAGTTCTACGCCA 59 25959727 25959746 GTTCATCTTCCAGTTGCCTC 59 NA InUTR Drosophila melanogaster 61 Sry-alpha FBgn0003510 FBtr0085557 1 1 1 60 3R 25868171 25868189 CGTCAATTACTCGGGACTC 57 25868211 25868231 GATCAGAATGAGGTCCTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trp FBgn0003861 FBtr0085513 2 1 1 80 3R 25744444 25744556 GAATACACGGAGATGCGTC 58 25744382 25744400 CTCGAGTTCCATGGATGTG 58 NA Drosophila melanogaster 61 Kul FBgn0039688 FBtr0085460 2 1 1 71 3R 25555261 25555341 ACTTTGGATCACCACACGA 59 25555373 25555394 GGGCAAACATAATGAAGTTACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7593 FBgn0039687 FBtr0085461 3 1 1 81 3R 25550157 25550234 GACTGTGTCCTGTATTGTTACG 59 25550097 25550118 AAGTGCTCATGATGAACTTTCC 59 NA Drosophila melanogaster 61 Obp99c FBgn0039682 FBtr0085463 1 1 1 72 3R 25512417 25512435 ATCTGATCGTAGCTCTGGC 59 25511894 25511912 ATCTCCTCACCAGTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14515 FBgn0039648 FBtr0085389 2 1 1 93 3R 25023777 25024812 AAGTCTACTTCACGGGCAC 59 25024868 25024887 AATTTCAGTTATGGCCGCTC 59 NA InUTR Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 2 2 2 87 3R 24970860 24970878 AGTTTCCACCACGGTAGTG 59 24970929 24971007 CTGTGAGCCCATGTAGGTC 59 NA Drosophila melanogaster 61 Sirt7 FBgn0039631 FBtr0085364 1 1 1 92 3R 24881950 24881968 CAGTCTTACATAACGCGGG 58 24882024 24882262 TATCATCGAGACCCTTCGC 59 NA Drosophila melanogaster 61 CG14519 FBgn0039619 FBtr0085340 1 1 1 124 3R 24817030 24817048 TTAATTGGTACAGTGCGCC 58 24817135 24817154 TGTTGCAGATATAGCTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inx3 FBgn0028373 FBtr0085350 3 1 1 81 3R 24680718 24680736 CCAGAAACACGACACTCTC 58 24680593 24680674 GATAAACCAGAACCACAGGA 57 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352,FBtr0085354 1 3 3 80 3R 24652716 24652734 CACGAGATCTACGATGGCA 59 24652582 24652672 TCCCACATGACCATCACTG 59 NA Drosophila melanogaster 61 wdn FBgn0005642 FBtr0085356 1 1 1 87 3R 24635845 24635863 GAAGCACCTAAAGACGCAC 59 24635716 24635794 GCTTCCCAATTTGAGGCAC 59 NA Drosophila melanogaster 61 CG12558 FBgn0039599 FBtr0085311 3 1 1 60 3R 24616245 24616264 TGCAGCTTAGTCAGCTAGTC 59 24616284 24616305 GAAGATCCGTAAACTGATCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 2 2 2 61 3R 24409375 24409393 GAGAACGGGTGCTATTTGC 59 24409332 24409351 CTAATGGCCTCCTTCTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98b FBgn0039582 FBtr0085288 2 1 1 117 3R 24178408 24178426 CTGTTTCATTACGGCTGGC 59 24178507 24178577 CCCAGGGATATACACTGGG 58 NA Drosophila melanogaster 61 CG4884 FBgn0039565 FBtr0085264 2 1 1 143 3R 23783459 23783539 ATGGCGAGAAACAAAGTGG 58 23783282 23783301 ATGGGAAGGATTCGATTGAC 57 NA Drosophila melanogaster 61 RpL4 FBgn0003279 FBtr0085248 1 1 1 80 3R 23749394 23749412 AAGGTCCAGAAGACCAAGC 59 23749455 23749873 CGACTTGTACACCTTCTGGA 59 NA Drosophila melanogaster 61 CG3348 FBgn0040609 FBtr0085172 2 1 1 172 3R 23117851 23117871 CTAACGACCAAGAAATAGCAC 57 23117567 23117585 AGTAATTCCGGAACATGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 bigmax FBgn0039509 FBtr0085173 3 1 1 113 3R 23113582 23113604 GGATCATTAAGAACGGCTATGAG 59 23113426 23113509 CCATAATGGCCTGGAACAC 58 NA Drosophila melanogaster 61 CG5882 FBgn0039490 FBtr0085109 3 1 1 80 3R 22945074 22945152 AAGCTACTGGATGAAACTTCC 58 22945192 22945212 CATCGTAGAAAGTTCCTTGGT 58 NA Drosophila melanogaster 61 NepYr FBgn0004842 FBtr0085100 1 1 1 95 3R 22883115 22883133 AGCACTTCCTCTCAATCGA 58 22883192 22883387 CACGATAATGGGTTCGCTC 58 NA Drosophila melanogaster 61 TwdlN FBgn0039441 FBtr0085031 3 1 1 95 3R 22458105 22458123 CTACACCGCTAACGAGGAG 59 22458182 22458200 CCCTTGATGAAGACGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlJ FBgn0039440 FBtr0114538 3 1 1 63 3R 22455835 22455853 CACCCAGTGAATCCTTTGG 58 22455880 22455898 GATTGAGATCCTTCCAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 1 2 2 80 3R 22095527 22095679 GGAGTCAACTTAGTGCCCA 59 22095722 22095741 TTTATCAGACTCGAGCAGGG 59 NA Drosophila melanogaster 61 CG31089 FBgn0051089 FBtr0084942 3 1 1 80 3R 21729345 21729427 GTGTGAATATGACTGCTATGCC 59 21729466 21729486 GTAGGTAGTGCAACATTTGGT 58 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 1 2 2 80 3R 21098641 21098716 AGATCCTTCTATGCTGCCT 57 21098760 21098778 ATCCATTGATGCCTCTTCC 57 NA Nonspecific Drosophila melanogaster 61 CG13641 FBgn0039239 FBtr0084729 3 1 1 60 3R 20690129 20690149 GCAGCAAATGACTACTATCCA 58 20690089 20690107 GAGAGTAGTATCCAGGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13641 FBgn0039239 FBtr0084729 2 1 1 60 3R 20690127 20690148 CAGCAAATGACTACTATCCACC 59 20690088 20690107 TGAGAGTAGTATCCAGGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696,FBtr0084697 2 2 2 112 3R 20620063 20620082 CGGCATGATAGAACATCGAG 58 20620154 20620326 GATGGAAATCTGTAGCAGTACG 59 NA Drosophila melanogaster 61 CG6607 FBgn0039204 FBtr0084644 2 1 1 126 3R 20354395 20354479 CTGACGTCATTGATTGACGAC 59 20354567 20354585 CCTTCCTGAGTCGCTTCTC 59 NA Drosophila melanogaster 61 Pp1alpha-96A FBgn0003134 FBtr0084642 1 1 1 84 3R 20344840 20344858 CAAGATCAAGTACGCGGAG 58 20344905 20345327 GTCATAGAACCCGTAGATGC 58 NA Drosophila melanogaster 61 CG6204 FBgn0039165 FBtr0084555 1 1 1 80 3R 20020753 20020834 CTAAAGGAGGATTGCCTAAGTG 58 20020875 20020893 GAACATGATCAGTGGTCGG 58 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 2 2 3 94 3R 19977633 19977653 GCATCGGAATGGAGTAATAGC 59 19977483 19977580 GTATTGATTCTCTGTTCCACGC 59 NA InUTR Drosophila melanogaster 61 CG18428 FBgn0039149 FBtr0084543 1 1 1 80 3R 19935245 19935263 CACCAACACCAATACAGCC 59 19935304 19935392 TGCTATTCATCAGTGCTATTGG 58 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084539 1 1 2 131 3R 19880163 19880328 TTTACGTAATATTGCCAGGCTC 59 19880418 19880438 GATTTGTCCGGTTTCCTTCAG 59 NA InUTR Drosophila melanogaster 61 Nup98 FBgn0039120 FBtr0084460 3 1 1 81 3R 19602592 19602668 GCACATTATGAGGAGACATCG 59 19602531 19602551 TGACAGGCATTTCAAACTTCG 59 NA Drosophila melanogaster 61 CG31515 FBgn0051515 FBtr0084429 3 1 1 60 3R 19214188 19214207 CTATTATGCCGATGACGGTG 58 19214147 19214168 TTAGTAATCGTCCTCTTCATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088,FBtr0084388 2 2 2 80 3R 19076818 19076900 TTCCCGAAATAGCTTTGCC 58 19076756 19076777 CAATGAAATCGTAGTCCACCTC 59 NA Drosophila melanogaster 61 CG17625 FBgn0039002 FBtr0084301 3 1 1 60 3R 18512938 18512958 GAAACACCTGTTCCATATTCG 57 18512980 18512998 AAGAGTCCCGAGTTGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084291,FBtr0084290 2 2 2 63 3R 18315647 18315665 TCATCAAGGGCACTAAGGC 59 18315539 18315558 TAGAAGTCATTGGGACCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13850 FBgn0038961 FBtr0084231 3 1 1 83 3R 18235356 18235442 GGGATTTGGATATCTTGGAATCAC 59 18235296 18235316 AATAGGCACTGAGATCTTGGG 59 NA Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 1 2 2 174 3R 18205912 18205987 CGATTCTGAATGGAAGACAGAC 59 18206122 18206140 TGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 CG13862 FBgn0038942 FBtr0084204 1 1 1 75 3R 18157796 18157893 TTTGTGGTGATGATGCTCG 58 18157932 18157950 GCTGGTCATAAAGGTAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264,FBtr0084184 1 2 2 80 3R 17855919 17855939 GCATGTATGTGCTCTATCTGG 58 17855793 17855877 AGCGCATATCAAAGTACGG 58 NA Drosophila melanogaster 61 CG6678 FBgn0038917 FBtr0084148 3 1 1 112 3R 17714886 17714904 ACCTGTCCTATGTGGATGC 59 17714979 17731658 AGCCGTACACTTCAAATGGA 59 NA Drosophila melanogaster 61 CG17819 FBgn0038915 FBtr0084152 3 1 1 80 3R 17710672 17710691 ATATCGCCTAACTGGTCGAG 59 17710554 17710633 CAATTTACGATCTCCTGAACACC 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 1 5 5 80 3R 17349341 17349361 GTGTCATAGGCAATGAATGCT 59 17349403 17349484 GTCTCTTGTAGCGTGTTCC 58 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 1 2 2 81 3R 17231539 17231557 TGTCTTCATCTGGGATCCA 57 17231600 17231709 CAACCAAATCCTTGAAGACAG 57 NA Drosophila melanogaster 61 CG17298 FBgn0038879 FBtr0084056 2 1 1 245 3R 17109001 17109317 TCAAAGTACTGTTCGTGCTC 58 17109587 17109605 CTGGAACCAATGGAACCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 2 2 2 102 3R 17101292 17101368 AGATCACGAGCATCAGTCC 59 17101208 17101226 GCTATATCCTCCGATCGCA 58 NA Drosophila melanogaster 61 CG17282 FBgn0038857 FBtr0084033 2 1 1 60 3R 16943921 16943945 CTCTTTATTCAGATACAGACCAACC 59 16943885 16943903 GCTCATAGCGTTTCTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppan FBgn0010770 FBtr0084012 3 1 1 84 3R 16942281 16942299 ATCTTCAACAAGGCCTCCA 59 16942346 16942427 ACTGGTGAACCTTGAAAGTC 58 NA Drosophila melanogaster 61 sec15 FBgn0038856 FBtr0084034 3 1 1 103 3R 16933466 16933549 ATCCTTGAAGGCAACAACAC 59 16933382 16933400 CCCTGGTAGTACAGATTGC 57 NA DesignRelaxed Drosophila melanogaster 61 dmrt93B FBgn0038851 FBtr0084007 2 1 1 80 3R 16901986 16902004 ATGTTGACCACTATGCCAC 57 16902047 16902331 TTTGCTCTGGTACTGATCTG 57 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0083944 1 1 2 93 3R 16418209 16418294 GACTACACCAAGTTCGCCT 59 16418134 16418155 TCCAGTTTATCTAGAGCCTCTG 58 NA InUTR Drosophila melanogaster 61 MtnB FBgn0002869 FBtr0083890 3 1 1 82 3R 16329157 16329236 GTGGAACAAACTGCCAGTG 59 16329093 16329111 ATTCTTGCAAACGCACTGG 59 NA Nonspecific Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0083828,FBtr0273258,FBtr0273259,FBtr0083827 2 5 5 92 3R 15842656 15842674 TGATGAAGCACTTACGCTG 58 15842730 15842809 ATGAGGACGTCAAAGTCCT 58 NA Drosophila melanogaster 61 CG42508 FBgn0260234 FBtr0300643 3 1 1 242 3R 15740804 15740822 CTATCTTCGCACTCCGGAG 59 15740512 15740530 ATCAAGAATAGGCCCTGCA 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42508 FBgn0260234 FBtr0300643 1 1 1 80 3R 15740854 15740872 CAGAAGGTGGACGAGAAGG 59 15740724 15740811 CATTTCAAATGCCTCCGGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12378 FBgn0038748 FBtr0083853 1 1 1 60 3R 15739078 15739101 GATTTATGGTGGCCTACTAAAGAC 59 15739041 15739059 TCACGCGATATCCATAACG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 ninaE FBgn0002940 FBtr0083857 1 1 1 105 3R 15712535 15712553 AAGTTCGAGGGCCTTACAC 59 15712380 15712468 GATATTTCGGATGGCTGATGC 59 NA Drosophila melanogaster 61 CG11659 FBgn0038731 FBtr0083797 3 1 1 80 3R 15602169 15602250 AGGCAACTATCATCTGACCA 58 15602108 15602126 ATGGTGGTAAGCAAACCAG 58 NA Nonspecific Drosophila melanogaster 61 CG17752 FBgn0038718 FBtr0083779 2 1 1 80 3R 15437838 15437857 CTGTTGATCAGCTTCCTCCT 59 15437900 15437976 TTGTGGTAGTTGCTTGTGC 59 NA Drosophila melanogaster 61 CG31475 FBgn0051475 FBtr0083735 2 1 1 118 3R 15026320 15026340 GCTACTGAACTATGTGAACCC 58 15026418 15026509 GATCAGTCATCTCTTTGAGGG 58 NA Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083728 1 1 2 119 3R 14920796 14921136 ATATCTGTGCAGAATGGCC 57 14921219 14921237 TCCGACTTGGTCTTGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083727 2 1 2 130 3R 14920732 14921129 CGTACTCAAAGTTATCTGTGCAG 59 14921219 14921237 TCCGACTTGGTCTTGAAGG 59 NA InUTR Drosophila melanogaster 61 Prp18 FBgn0027784 FBtr0083717 1 1 1 60 3R 14856252 14856273 GTCATTTACACGCAGACTAAGG 59 14856213 14856232 TGTGATGCTTTAACTTGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 moi FBgn0261019 FBtr0299938 1 1 1 80 3R 14081524 14081603 TGTTTGCCAAAGAAGTACTCC 58 14081645 14081663 TTCGACGACTTTGTCATGG 58 NA Nonspecific Drosophila melanogaster 61 CG7175 FBgn0038584 FBtr0083609 1 1 1 108 3R 14049039 14049057 GAAGGAGGATCTCAAGCCA 58 14048897 14048968 ACGATAGGAACTACCCAGAG 58 NA Drosophila melanogaster 61 CG10326 FBgn0038453 FBtr0083336 2 1 1 80 3R 12470095 12470279 AGTCCACAGTGTTTGTAATCG 58 12470318 12470339 GCAGTAGATTGTTAATGATGGC 57 NA Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 2 2 2 60 3R 12398522 12398542 CAGAACTTTACAACGCTACAC 57 12398563 12398582 CCAGAAACTCCAAGGTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sra FBgn0086370 FBtr0083255 3 1 1 272 3R 12012940 12012958 CAACAACGGTGGAGAAGAG 58 12021924 12021943 CTGTTCTGTGTCGACTTCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4221 FBgn0038385 FBtr0083201 2 1 1 91 3R 11757604 11757695 CATACAAGTCACAGATGCGG 59 11757749 11757767 CTGTGATGTTCAGGCAGTC 58 NA Drosophila melanogaster 61 Pbp45 FBgn0038371 FBtr0083190 3 1 1 60 3R 11665105 11665126 GAATATCTTTGACGACTGCTGG 59 11665066 11665085 GCCATCATTAACCAATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5302 FBgn0038351 FBtr0083149 1 1 1 80 3R 11463092 11463275 TGATCACGAATCAGTAGCTC 57 11463312 11463336 CTATAGGTACAGTAACTATCGTGAC 58 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129,FBtr0083130 1 2 3 60 3R 11089033 11089051 CAGATCGGTGTGAACAGGA 59 11088431 11089011 GTTTAGAGACGTCCAAGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 82 3R 11002133 11002151 AGCTAACTACGACGCAGAG 59 11001999 11002088 CATAGCGAGATGGGTACCTG 59 NA Drosophila melanogaster 61 CG6934 FBgn0038289 FBtr0083039 1 1 1 99 3R 10937904 10957340 TGTTGTGAGAGCGAATGTG 58 10937823 10937841 ATGTTGCTGTTGTGTTTGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 VhaPPA1-1 FBgn0028662 FBtr0083005 2 1 1 91 3R 10729735 10729755 TGTACGTCATGTGATTGTGGA 59 10729605 10729683 GTTCACTGTCGAATTGCAGG 59 NA InUTR Drosophila melanogaster 61 CG7026 FBgn0038276 FBtr0290022 3 1 1 60 3R 10725442 10725462 TTCGTCAAGATCCTCATTGTG 58 10725402 10725420 CAATCAGGCCAAACAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7262 FBgn0038274 FBtr0083008 3 1 1 84 3R 10722232 10722250 GCGGAGTCTTTGATACCAC 58 10722104 10722186 AAGAGTCCACTGTTAACATCG 58 NA Drosophila melanogaster 61 RpII15 FBgn0004855 FBtr0082925 3 1 1 156 3R 10134841 10134914 AAAGCCAATAGCCATGACG 58 10135034 10135052 GTAATCGCAATTCCGGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3259 FBgn0038221 FBtr0082924 2 1 1 159 3R 10128967 10128985 AGTCCGTCACCAGTTAAGC 59 10129108 10129191 ATGGAGGAACCATTTCCGG 59 NA Drosophila melanogaster 61 CG42500 FBgn0260226 FBtr0300627 2 1 1 149 3R 9978178 9978196 GTTCCTGTAGGACACGGAG 59 9978047 9978066 GCCAGAATGACCATGAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tal-3A FBgn0259732 FBtr0299999 1 1 1 112 3R 9639392 9639410 ACTGAAGTTGGAGCAAGCA 59 9639486 9639504 CTTAGTAGGTGCCAGTGGG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG15888 FBgn0038131 FBtr0100257 3 1 1 126 3R 9111205 9111707 CAAGAAGGCACCCAAATCC 59 9111097 9111116 GTAGGTCTCCACACTTCCAC 59 NA Drosophila melanogaster 61 CG8630 FBgn0038130 FBtr0082737 1 1 1 108 3R 9109262 9109280 AACTACCACCACGTCTTCC 59 9109352 9109427 AGGCTTGTCCGATCTTAGC 59 NA Drosophila melanogaster 61 CG14380 FBgn0038124 FBtr0300768 3 1 1 81 3R 9014343 9014361 TATTGCTATTCCTCACGGC 57 9014472 9014490 TCATAACTGACGTGGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 timeout FBgn0038118 FBtr0082712 3 1 1 81 3R 8914896 8914914 CTACAAAGCAGCCTTTGCC 59 8914957 8918467 CGCAAATGCTATTTCCAAAGC 59 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 1 2 3 80 3R 8855691 8855709 GCGACAACACTTTCTACGA 58 8854595 8855648 TGATAAGGCTCTCATTGCAC 58 NA Drosophila melanogaster 61 CG5724 FBgn0038082 FBtr0082657 3 1 1 124 3R 8566068 8566155 TTGTACAAGGAATTGTTCGGTG 59 8566240 8566258 GGAACATTTGGTCGGATGG 58 NA Drosophila melanogaster 61 trus FBgn0038055 FBtr0082634 2 1 1 132 3R 8283606 8283683 GCTGTTGAGATATTCGCGG 59 8283779 8283797 CAGCTTGGGAATCAGTGTG 58 NA Drosophila melanogaster 61 CG10005 FBgn0037972 FBtr0082507 2 1 1 72 3R 7802751 7802769 CAATTTGCTGTTGGCTGTG 58 7802204 7802716 TTGTTCCCAGATTTCTTGGT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0301023,FBtr0082528,FBtr0300622,FBtr0082526,FBtr0113391 2 6 6 80 3R 7626741 7626890 GGAAAGGAAGGTCCTTTCG 58 7626679 7626699 TATGCCTTGGAATGATGTGAC 58 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 3 2 2 82 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617676 7617697 ATAGTCTACGGGAATGAAGTCC 59 NA Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 3 1 1 158 3R 7497205 7498299 AATGCCAATTATGTGCGGG 59 7498419 7498439 CTCAATTCCGTTCTCACTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14709 FBgn0025701 FBtr0302027 1 1 1 80 3R 7397466 7397486 TTCACTACCTGTGGATAGCTC 59 7397525 7398008 ACATGGATGATATGCCAATCTC 58 NA Drosophila melanogaster 61 CG6764 FBgn0037899 FBtr0082403 2 1 1 92 3R 7257195 7257213 AAATGCGCATTCAAACGTG 58 7257051 7257139 ACTTGAAGACCTTGCAGTC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18643 FBgn0037898 FBtr0300901 2 1 1 97 3R 7255981 7256068 TGTTGAGTATCTTGTCCGGA 58 7256126 7256146 GCAGTTCTAGGTTCAGATCCT 59 NA Drosophila melanogaster 61 Irbp FBgn0011774 FBtr0082385 2 1 1 80 3R 7236525 7236789 GTCAAGAGCTATCGAACTGG 58 7236831 7236850 TTCAACTTACGATCGGACAG 57 NA Drosophila melanogaster 61 CG14701 FBgn0037883 FBtr0082353 2 1 1 80 3R 7057830 7057919 GATTTCAGATCTCCAAGGAGG 58 7057960 7057979 TGACCTTGATGACTAGGGAG 58 NA Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 1 2 2 148 3R 7043275 7043351 TGAGACATGAAAGGGAGGC 59 7043518 7043537 GGAAGAGTTGATGTGCTGAG 58 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082277,FBtr0082276,FBtr0082275 2 4 4 74 3R 6610338 6610356 TATAGGGAGTGGGACTTGG 57 6610394 6610412 TTCTATCTCGTGCTTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31272 FBgn0051272 FBtr0082312 3 1 1 81 3R 6582678 6582760 AAACGCATGATGACTTACGG 59 6582616 6582635 GTGTCATTAGACTGCTCACG 58 NA Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 1 2 2 126 3R 6162872 6162954 AAAGAAAGAGCATCTTGCCAG 59 6163042 6163060 CTTGGACGATTTCGCTGTG 59 NA Drosophila melanogaster 61 CG12807 FBgn0037772 FBtr0082171 3 1 1 80 3R 5825425 5825446 CCATCATTCCAGATTTCAAGCT 59 5825561 5825633 CGAATACGTCGCAGATTCC 58 NA Drosophila melanogaster 61 CG8507 FBgn0037756 FBtr0082140 2 1 1 80 3R 5617714 5617732 CATGAGCAGCTACGATCTG 58 5617775 5617856 TCGTGGAATTTCTTGTAGGG 57 NA Drosophila melanogaster 61 MtnA FBgn0002868 FBtr0082158 2 1 1 273 3R 5610027 5610047 GCAACTAAAGGCCTAAATAGC 57 5609510 5609529 GACATTTATTGCAGGGTGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8273 FBgn0037716 FBtr0082072 3 1 1 111 3R 5405793 5405811 GTCTTAGTGCCATTCGACG 58 5405945 5405963 GGCAGATGCTTTGAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9836 FBgn0037637 FBtr0081930 2 1 1 88 3R 4648787 4648998 TAGAGCTCTGTGAGTGATTGG 59 4648719 4648743 CCAGCTATCCTTTAGTATCAATGAC 59 NA InUTR Drosophila melanogaster 61 CG8236 FBgn0037626 FBtr0081916 3 1 1 131 3R 4596300 4596393 GAACAAGCCACATATGGCC 59 4596488 4596506 TTTAACCACGGACGATCCT 58 NA Drosophila melanogaster 61 p FBgn0086679 FBtr0081887 1 1 1 118 3R 4489275 4489375 ATCGCATCAAGTACACCTG 57 4489175 4489195 CTTGTTTGGTATCAAGAGCAG 57 NA Drosophila melanogaster 61 CG11753 FBgn0037603 FBtr0081879 3 1 1 92 3R 4478926 4478944 CTTCACCCTTGGCCTACTC 59 4478997 4479088 ATGTGGATCTCATGGTATTCGA 59 NA Drosophila melanogaster 61 Obp85a FBgn0037589 FBtr0081849 3 1 1 134 3R 4246077 4246296 TTCCATGTTCCTAACACGTC 58 4245905 4245923 AAGTTGCACTCCTCAATGC 58 NA Drosophila melanogaster 61 CG2781 FBgn0037534 FBtr0081823 2 1 1 80 3R 3809808 3810526 CGTACATCGTAAAGGTACTCG 58 3809748 3809768 TGTAGACGATCAAGACTTTGC 58 NA Drosophila melanogaster 61 ftz FBgn0001077 FBtr0081625 1 1 1 83 3R 2690790 2690808 TCATCGAATTGTGACAGCC 58 2690855 2691020 TCTTTGCAATCTGATGCCA 57 NA Drosophila melanogaster 61 Ccp84Ag FBgn0004777 FBtr0081689 3 1 1 144 3R 2512463 2512483 ATTCGGTATCTAGAGCAACCC 59 2512803 2512822 GATCGTACTCCTCAACCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Spase18-21 FBgn0026567 FBtr0081687 2 1 1 227 3R 2484111 2484129 CATACCCATTGTACACCGC 58 2484895 2484974 AGAATGGCCCACTTAACCT 58 NA DesignRelaxed Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 3 2 2 119 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161730 2161750 CGGATATAGTTCTCAATGGCG 58 NA Drosophila melanogaster 61 Osi17 FBgn0037427 FBtr0078610 3 1 1 158 3R 2147713 2149540 CAACTTTCGCCTGAAATAGCA 59 2149736 2149754 GGGACTGTAGAACGGATCG 59 NA Drosophila melanogaster 61 CG15589 FBgn0037409 FBtr0078591 2 1 1 82 3R 2032046 2032699 TCAACTCAGCAGGGAACTG 59 2032742 2032763 CTCGCATGTACTTGAAGAATCG 59 NA Drosophila melanogaster 61 NPFR1 FBgn0037408 FBtr0078590 1 1 1 90 3R 2018054 2018072 ACCCTGGTTGTTATAGCCG 59 2018125 2018206 AAAGTAGGTCCGATATGGCC 59 NA Drosophila melanogaster 61 CG1077 FBgn0037405 FBtr0078587 3 1 1 80 3R 1993437 1993611 GAATGGCCCTCTATATGACG 57 1993653 1993672 ACTGGCTGATATCTTGAGCT 58 NA Drosophila melanogaster 61 CG2023 FBgn0037383 FBtr0078666 3 1 1 84 3R 1650016 1650090 TAATACACGACATCCTGAACAG 58 1649953 1649971 ATAGCAGACAGTTTGGAGC 57 NA Drosophila melanogaster 61 Rpn5 FBgn0028690 FBtr0078629 3 1 1 81 3R 1616690 1616710 CGAGATGTTCAAGGATAGCAC 59 1616749 1616833 GCGAATGTTATGCTCTATCAGAC 59 NA Drosophila melanogaster 61 CG2091 FBgn0037372 FBtr0078678 2 1 1 110 3R 1579957 1580036 CCAGGATTTGTGCAGTGTG 59 1579865 1579884 TAGAGATCAGGAGTCTCCCG 59 NA Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 1 2 2 80 3R 1560929 1560947 CAAACGCCTGAAGCTATCC 59 1560806 1560886 TACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789,FBtr0301640 1 2 2 109 3R 1202652 1202670 ATATGTTGTTCCGTTCGCA 57 1202791 1202809 ATCCTTGGCGCTATAGGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mms19 FBgn0037301 FBtr0078778 3 1 1 99 3R 1061438 1061570 TCAGCATACCATGCAAGTG 58 1061632 1061651 AGTAACATCGACTTTGTGGG 58 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 2 2 2 85 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748535 748677 AACAAATACCTGGTGTACTCC 57 NA Drosophila melanogaster 61 CG1126 FBgn0037280 FBtr0078872 2 1 1 83 3R 642542 642560 TTTCACCGACGTATCTGGG 59 642603 642685 CGCTGATAAAGGTGATATACGTC 59 NA Drosophila melanogaster 61 Syt14 FBgn0261086 FBtr0078957 1 1 1 69 3R 142823 143388 CAACAACGATGACGAACCC 59 142772 142790 AACCAGTAGGTCATCCGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17454 FBgn0039977 FBtr0299868 3 1 1 111 3L 23708252 23709007 CTACAATTGCAACAAGTGGAG 57 23709077 23709098 GTATCAAATCACGAGTAAGGGT 58 NA Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552 2 1 2 80 3L 22865434 22865543 CCTTAAAGTGAATTCTGCTGCA 59 22865583 22865602 TTCACCCTGTAAGTGGTGAC 59 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0100184,FBtr0078581 3 3 3 105 3L 22791956 22791974 GTACAAGTGTGGTCAGTGC 58 22791546 22791564 GTTGGGCATAGGACAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11523 FBgn0037156 FBtr0078511 3 1 1 60 3L 22259534 22259554 CTGAGATTTGCATCTCATCCA 58 22259494 22259514 CGGATGTTCAGGTAAATTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15374 FBgn0037152 FBtr0078483 1 1 1 60 3L 22158543 22158563 CTAACGATGTAACCGCTACAC 59 22158584 22158603 GAAGGATTTCTGGATACGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078473,FBtr0078474 1 2 2 97 3L 21943417 21943435 CTACTTGCTGCTTTGCCTG 59 21943496 21943569 TTGTGATGTTGCACCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421,FBtr0089797 1 2 3 161 3L 21522058 21522076 GCGACTTTAAGGTGACGAG 58 21521789 21521875 GTCATGAACATGTAATCTCCCA 58 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089461 2 1 3 205 3L 21169619 21171205 TTGCAAATAGTTGCCGCAG 59 21171372 21171392 AACCGTCAATAAGGAATCCCA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33287 FBgn0053287 FBtr0290073 3 1 1 80 3L 20962903 20962922 ATCTATGGCGCATGGATCTC 59 20962785 20962864 CGACAATCATTAGTGGTACTTCC 59 NA Drosophila melanogaster 61 CG10588 FBgn0037037 FBtr0078284 2 1 1 60 3L 20950562 20950580 TGGATCAAACTCACCTGGA 58 20950604 20950622 AGTGGAGCCTTCATTAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spc105R FBgn0037025 FBtr0078255 3 1 1 81 3L 20798951 20799034 GTGCAAGCTAAGAACAGAAGAG 59 20799074 20799094 TTCGGTTAGCAAACGTTTGAG 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078253 3 1 3 100 3L 20791865 20791888 CAGTTTATCTAGCCGAAAGTACAG 59 20791947 20792248 TTTGCACTCGGAAGTAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078252 1 1 3 138 3L 20791787 20791805 CGAGCATAGCAGATTTGGA 57 20792331 20792349 ATAGTTATCCTGCAGGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113183 2 1 2 122 3L 20709989 20710007 GCAACCACGTGGTAAATGG 59 20708770 20709903 ATATGCGGCAACATTTGCA 59 NA Drosophila melanogaster 61 CG32226 FBgn0052226 FBtr0074846 1 1 1 81 3L 20291356 20291374 GATGTCGTCTTAGCAGCAG 58 20291235 20291311 TCATCCAATACCTGCAGGG 59 NA Drosophila melanogaster 61 CG32228 FBgn0052228 FBtr0074836 1 1 1 60 3L 20261126 20261150 GCATGATCGATAATACAGATACGTC 59 20261166 20261186 AAATCGCTATCGGGTATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074855 1 1 3 114 3L 20212750 20213204 GATGGGAGCAATCAATATGAGG 59 20212657 20212675 GTATCCATAGCCCGACCAC 59 NA InUTR Drosophila melanogaster 61 Oat FBgn0022774 FBtr0074961 1 1 1 84 3L 19640644 19640718 TAACCAGAAGTTCGATGCC 57 19640578 19640596 AATAATGTCGCCATGGGTG 58 NA Drosophila melanogaster 61 CG9300 FBgn0036886 FBtr0074938 2 1 1 85 3L 19546274 19546292 TTAAGCGGGAAGAGGTTCG 59 19546338 19546439 TTTATCAGACCAAATGGTCAGC 59 NA Drosophila melanogaster 61 CG32204 FBgn0052204 FBtr0113429 2 1 1 80 3L 18923741 18923760 GTACTGATATACTCGTGGCG 57 18923240 18923700 TATTTGCACACCGTAGTAGAC 57 NA Drosophila melanogaster 61 CG6841 FBgn0036828 FBtr0075068 3 1 1 80 3L 18900206 18900228 GTTAAGGCTGTCATTGGAATAGG 59 18900268 18900367 CTTTGCGCAGAATTCAGCA 59 NA Drosophila melanogaster 61 CG34255 FBgn0085284 FBtr0112449 3 1 1 107 3L 18863645 18863717 CTTCAGCGGAAACTAATCGA 58 18863787 18863805 TTGATCAGTGGTTACGAGC 57 NA Drosophila melanogaster 61 Cat FBgn0000261 FBtr0075058 3 1 1 103 3L 18820345 18820461 ACTACTTTGCTGAGGTGGAG 59 18820527 18820545 GTAGGAGAACAGACGACCA 58 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 1 2 2 85 3L 18747722 18748242 GAAATTGTGCTTCGATTCTGG 58 18747593 18747611 CACGAATCATCGGTGAGAC 58 NA Drosophila melanogaster 61 CG13698 FBgn0036773 FBtr0075137 3 1 1 90 3L 18083167 18083185 CTCATCCAGGGAGAAGGTG 59 18083030 18083114 TATGATGGCCAGTACACCTC 59 NA Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 3 2 2 85 3L 17847363 17847451 AATACGCAATTGGCTCTGC 59 17847296 17847314 CAGGAAACTGCTCATCGGA 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 1 2 3 178 3L 17636817 17637999 TTGCAACACCGTAAAGGTC 58 17636657 17636675 AAGGCGACATGTTCATACC 57 NA InUTR Drosophila melanogaster 61 CG9715 FBgn0036668 FBtr0075330 3 1 1 85 3L 16838602 16838680 TGAGTGATCTTGAGGAGATGG 59 16838727 16838745 GAATCCATCGCTGTAGTGG 58 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 2 3 3 80 3L 16665633 16666164 GACGGAGGCATTATTCTGGA 59 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 CG13065 FBgn0036590 FBtr0075468 2 1 1 156 3L 16270559 16270577 ACGAGTTCAACTTGCAACC 59 16270766 16270784 GTGTCCATAGGAGATGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4950 FBgn0036587 FBtr0290260 3 1 1 60 3L 16259959 16259979 TCAGAAATTGGGAGTATCGAG 57 16259919 16259943 GATGAGTAGATGATGTAGATAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34246 FBgn0085275 FBtr0112440 1 1 1 84 3L 16226641 16226659 CCAGTTGCAGACCATTGTG 59 16226767 16226785 GAGGGAACTCCAGTCTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33688 FBgn0053688 FBtr0091668 3 1 1 97 3L 16192717 16192736 TTAAAGGATCCACGACAGTC 57 16192794 16192875 ATGACAACGTCCTTATATGGG 57 NA Drosophila melanogaster 61 Pgm FBgn0003076 FBtr0075492 3 1 1 126 3L 16119538 16119556 CAGATCCTGTCGACAAGTC 57 16119364 16119448 TCAATGTACAAGCGAACGG 58 NA Drosophila melanogaster 61 CG17027 FBgn0036553 FBtr0075516 3 1 1 90 3L 15974043 15974293 AATGCTAGACGACTTGTTGC 59 15974345 15974364 TGTCCTCAATGTAGAAGGCA 58 NA Drosophila melanogaster 61 CG42570 FBgn0260776 FBtr0301333 2 1 1 81 3L 15711965 15711985 TGGTTAGAGACATCTACACCA 58 15712026 15712102 TTGTTCCATCACCATCAAGAC 58 NA Drosophila melanogaster 61 Eig71Ea FBgn0004588 FBtr0075587 3 1 1 61 3L 15642347 15642428 TAAATTGCTTGGGTTGGCA 58 15642304 15642322 CATACCAGCCCTCATAGCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7427 FBgn0036510 FBtr0075561 1 1 1 166 3L 15556819 15557370 GCAGTGCAATGAACAAACTG 58 15557495 15557517 GTAATAGTACTCCGGATTCTGGA 59 NA InUTR Drosophila melanogaster 61 Best3 FBgn0036492 FBtr0075618 1 1 1 80 3L 15294928 15294998 CTATACACAGGTCGTCACCC 59 15294867 15294886 ATATCCCGATCGATCCACTG 59 NA Drosophila melanogaster 61 CG5114 FBgn0036460 FBtr0075624 2 1 1 85 3L 14977145 14977164 TATCCATCTGGGACTATGCC 58 14977209 14977320 CCATTTGATCCTTATGACAGCA 58 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075762 2 1 3 148 3L 13967866 13969025 ACGATCTTTGATGCCAAGC 58 13969137 13969155 TAGAAGCTCTTCCGTTCGC 59 NA Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751,FBtr0075752 3 2 2 60 3L 13837535 13837553 TGTGGGATGAGAAGTTCCT 57 13837575 13837595 GTCCATAGCCCTGTAATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34243 FBgn0085272 FBtr0112437 3 1 1 121 3L 13776625 13779978 GAACATATTGCCAGTTGCG 57 13776522 13776541 CCTGCTATAGACTGCTTGTC 57 NA DesignRelaxed Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075815 3 1 2 89 3L 13644663 13644683 ATCCATTAATACCACCAGCCA 59 13595565 13631623 GATCTAAATGCTCGCTGCG 59 NA Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075810,FBtr0075811 3 2 2 136 3L 13494307 13494395 CTCTACAGATATGGCGATGTG 58 13494493 13494511 GCTTAGGTGTACCACTTGG 57 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487,FBtr0302488 2 2 2 80 3L 13455581 13455600 TTGACTTTCGTGAAGTGCAG 59 13455643 13455980 AGTGATTTAGCAAGTGGCG 58 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 1 2 2 104 3L 12698331 12698349 TCTGAAGGAGAACCTGGTG 58 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 caup FBgn0015919 FBtr0075909 1 1 1 80 3L 12610321 12610341 ATCCCTCTAACGAACAGAACC 59 12610383 12610703 CGTAGGGATTGCTCAGAGG 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983,FBtr0075982,FBtr0075984 1 3 3 116 3L 12398027 12398112 TGTACTTGCAGGTACAAACAC 58 12397931 12397952 CAATCTTCAACACATTGATGCC 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 3 5 5 101 3L 12021869 12021887 GAAACTGATCGACACCTGC 58 12020252 12021805 CCATCAACATCTTTCAGCGA 58 NA Drosophila melanogaster 61 CG33500 FBgn0053500 FBtr0076094 1 1 1 78 3L 11501776 11501794 ATTCAGGTTGCGTCATCTG 58 11501836 11501854 TTGATGCTGCAGTAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 As FBgn0061469 FBtr0076186 3 1 1 83 3L 11200913 11200931 CCAGCTAATCGTGGAGGAG 59 11200782 11200869 GCATTGAACCACATATTGTTGG 58 NA Drosophila melanogaster 61 klu FBgn0013469 FBtr0076247 1 1 1 82 3L 10978168 10989342 CGTCTAAATCAAAGAGTCCCA 57 10978106 10978124 CTGGCCACAAGATATCCAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34001 FBgn0054001 FBtr0300947 1 1 1 100 3L 10627291 10627380 GCCAACCTATTCTCATCATTGG 59 10627441 10627459 TCCCTCATTGGTCTTGGAC 59 NA Drosophila melanogaster 61 CG42535 FBgn0260643 FBtr0300948 1 1 1 122 3L 10623811 10623832 GTTCAAGCAATGATTCTTCTGG 58 10623592 10623667 TGGCTTGCGCTTATAAAGG 58 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 2 1 2 160 3L 10405985 10406063 CTCCAATACGATTCGTGGC 58 10406187 10406205 CATGTGAGTGAGAAGCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ilp3 FBgn0044050 FBtr0076373 2 1 1 82 3L 9794899 9794989 CCAAGAGAACTTTGGACCC 58 9794835 9794855 ATCACTCAACAGTCTTTCCAG 58 NA Drosophila melanogaster 61 CG33703 FBgn0053703 FBtr0091691 2 1 1 103 3L 9505615 9505633 CTTGTAAAGTGGTTCGCAG 57 9505477 9505549 AACACCAAGGTTAAGAACGA 57 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698,FBtr0076500,FBtr0076501 2 4 4 91 3L 9346922 9346998 CATTCAGGAAGAGGGTCCC 59 9346849 9346867 TGGGCGACTTAAGATTCGA 58 NA Drosophila melanogaster 61 CG4942 FBgn0035960 FBtr0076524 1 1 1 166 3L 9066618 9066636 TCTGACCATTTACCAGCAC 57 9066766 9066841 ACTGCTTCTTGATCGAACG 58 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076545 2 1 6 69 3L 9043448 9050650 TTGCAAAGCAAACAAGACAC 58 9043398 9043416 ACTTGGCATAACCCTCCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 3 5 5 83 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986076 8986096 TTGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140,FBtr0076514,FBtr0076513 2 4 4 159 3L 8960297 8960386 GGTCAGAAATACACGCACC 58 8960509 8960527 TCTTCACCGTCCAGAAGTC 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137,FBtr0301913,FBtr0290105,FBtr0076565 2 5 5 84 3L 8928153 8928171 ATCATCGGGAACTACACCA 58 8928030 8928105 TTGCTGTAAATCTGCCTGC 58 NA Drosophila melanogaster 61 CG32022 FBgn0052022 FBtr0076597 1 1 1 80 3L 8713994 8714069 AGGAACTACCTCAAAGTGTCG 59 8713934 8713952 ATCGTCCAGTTCTGTCTGC 59 NA Drosophila melanogaster 61 CG6638 FBgn0035911 FBtr0076651 1 1 1 80 3L 8568931 8568952 AGTCGCCTTCAATTTCTTTCAG 59 8568816 8568893 CGCATGTCCTTGAAATTATCCA 59 NA Drosophila melanogaster 61 exo70 FBgn0035892 FBtr0076612 1 1 1 80 3L 8408696 8408714 CGAGAAGGCATCAAACGTG 59 8408755 8408831 ATGCACTCCAGAGTAAATTTCG 59 NA Drosophila melanogaster 61 Cpr66Cb FBgn0035875 FBtr0076601 1 1 1 114 3L 8330823 8330841 AATCGAACGCATCTCACTG 58 8330918 8331020 GGGAGGAGCATAGTAATCCA 58 NA Drosophila melanogaster 61 CG13674 FBgn0035858 FBtr0076719 3 1 1 255 3L 8211935 8212018 CATGAAATTCCTCGCCGTC 59 8211698 8211716 CACTGGAGCGGTATAAGCA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 1 2 2 72 3L 8115215 8115288 AATACTACAGTGGCGAGCT 58 8115324 8115342 TAATTGGAGGCCTCATGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205,FBtr0110885 3 2 2 108 3L 7726863 7726885 GGGTACAGTTCAATATGTTCCTC 59 7726716 7726795 TTGAGTTGAATGCCCTCCT 59 NA Drosophila melanogaster 61 CG12262 FBgn0035811 FBtr0076808 3 1 1 253 3L 7712546 7713166 TTCCTCAACAAGCTTGCTG 58 7713383 7713401 ATGTGGTTGTTCATCAGGC 58 NA DesignRelaxed Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 3 2 2 85 3L 7352943 7353034 ATAATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 CG8602 FBgn0035763 FBtr0076884 2 1 1 60 3L 7320047 7320066 CGCGGTAATCTCAACATGAC 59 7320006 7320024 GATAATTCTCGGCGCTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0076918 2 1 2 135 3L 7151488 7151506 ATTCGAAAGGCCAACATGG 58 7151605 7151687 GAACTGGAACTCCATCGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 3 2 2 96 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124306 7124327 CTTGAAGAGACCGTAGAATTCC 58 NA InUTR Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 2 2 2 80 3L 7061622 7061640 GTATGTGGTTCTCGACGTG 58 7061496 7061580 TACATCAGGAACATCATCACC 57 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950,FBtr0076951 3 3 3 82 3L 6739712 6739731 TATCTCCTCAAGACGTGTGC 59 6739575 6739667 TTGAAGCCGGTATGTTCGT 59 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 1 2 2 80 3L 6708857 6708875 AGTTCTCGCAGGAGATTGG 59 6708456 6708814 TGAACCAGTATACCGTGGAC 59 NA Drosophila melanogaster 61 CG10469 FBgn0035678 FBtr0077064 3 1 1 99 3L 6085878 6085958 GTCTAATCTCTGGAAAGTGCTG 58 6085800 6085818 CTTCTTGTGGACGATGGTG 58 NA Drosophila melanogaster 61 lin-28 FBgn0035626 FBtr0077090 2 1 1 147 3L 5649720 5649738 TCAGGTTTCCGATCACTGG 59 5649849 5649936 GAGTCCGGCGATTTATTCG 58 NA Drosophila melanogaster 61 sinu FBgn0010894 FBtr0300070 1 1 2 198 3L 5554083 5554101 ATATGTGCTTCTCGGTGCT 59 5553728 5553921 TTTCCTCTTGGTTGGGTGG 59 NA Drosophila melanogaster 61 Srp54k FBgn0010747 FBtr0077169 3 1 1 81 3L 5146852 5146960 CTGATAGATAAGGTAAACGAGCTG 59 5147000 5147018 GGATGGTGAAATGACCGTG 58 NA Drosophila melanogaster 61 axo FBgn0261546 FBtr0302646 2 1 1 80 3L 4643720 4644057 TTAATGTCAGCATGATTCCCG 58 4643660 4643678 CATCGTACACGAATCTCGG 58 NA Drosophila melanogaster 61 CG15022 FBgn0035547 FBtr0073333 1 1 1 90 3L 4460171 4460252 AGGAAATGAAACCCATGCTG 58 4460100 4460118 TAACCTCCTCCGTACAGGT 59 NA InUTR Drosophila melanogaster 61 CG1332 FBgn0035514 FBtr0073224 2 1 1 80 3L 4217524 4217542 ATTACACCAGTGACGTGCT 59 4217583 4217666 TAGGATTTATGCATCCAATGGG 58 NA Drosophila melanogaster 61 mas FBgn0011653 FBtr0073260 1 1 1 80 3L 4164574 4164651 TCCAGCCAAACATATGAGC 57 4164512 4164530 GACGTACTGGAACTCTTGG 57 NA Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 1 2 2 87 3L 4154450 4155248 CTTGAATCGGGAAGCTGTC 58 4154381 4154399 TTCCGACAGATCAAATGGC 58 NA Drosophila melanogaster 61 CG32263 FBgn0052263 FBtr0073183 2 1 1 60 3L 3810413 3810431 GGTGTTCGTCAATGTAGCC 58 3810371 3810394 CCCGTACTTTATATGAGAAAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33160 FBgn0053160 FBtr0073102 3 1 1 60 3L 3206004 3206025 CAAGACCCTCAATATGGATGTG 59 3205965 3205985 ATTGGCTCCAATCATATCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42525 FBgn0260430 FBtr0300854 1 1 1 80 3L 3189237 3189355 CACAACGGATATAGTAACAGATTCG 59 3189181 3189201 GAATCGGTAGTTTCAGCTGTG 59 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 1 3 3 80 3L 3119960 3120042 CTTGATCAATTAACCCACGC 57 3119899 3119920 CATTTCTGCCAAGGAATTACTC 57 NA Drosophila melanogaster 61 CG32846 FBgn0052846 FBtr0073009 1 1 1 86 3L 2951309 2951332 CCTGTGGAAATATCTTATCGAAGC 59 2951183 2951265 CCATACCAGAAGCATTGGGA 59 NA Drosophila melanogaster 61 Aats-pro FBgn0027082 FBtr0072948 2 1 1 95 3L 2651277 2651356 TTCCTCATGAGTCCAACCC 59 2651200 2651218 TTGGAAGAGTCTCAAGGGC 59 NA Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 2 1 1 75 3L 2595971 2596046 AAATCCTGTTGTGGAGAGGG 59 2596084 2596102 TAGCTTCTTGTCCTCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 oxt FBgn0015360 FBtr0072904 3 1 1 164 3L 2261603 2261722 AATAGCCAAGTTCACCGCT 59 2261457 2261478 TCCACATGGATGTAGTAAACGT 59 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 1 2 2 94 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341782 1341800 ACCTTCTCGATTAGTGCCG 59 NA Drosophila melanogaster 61 l(3)02640 FBgn0010786 FBtr0072679 3 1 1 88 3L 1337533 1337614 CGTGATTGGAACCTCATCTC 58 1337664 1337683 TTAGATTTCCACGGATGTCG 57 NA Drosophila melanogaster 61 Gr61a FBgn0035167 FBtr0072585 1 1 1 90 3L 842104 842173 CAAGAATATCGTGGGTTTGGT 58 842225 842243 CATTATGTGCGACCAGGAG 58 NA Drosophila melanogaster 61 Cypl FBgn0035141 FBtr0072564 1 1 1 81 3L 542819 542837 GATCCCAACAATGCTGGTG 59 542664 542774 TGATTTCTCCCATGCTCGT 59 NA Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 2 2 2 162 3L 317402 317473 TGAGCCAGAACGAATCCTG 59 317599 317617 TCTCTACTTCGGTTTGCGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 1 2 2 82 3L 268393 268411 GGAGAAGTATGGGAGGAGG 58 268457 268578 TATCGACAAGACAGACCGT 58 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864,FBtr0301889,FBtr0072474 1 3 6 99 3L 168760 168778 AAACTCAAATTCGGGAGGG 57 168841 172069 TGTGATTACCTTTGTCGGC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-176 FBgn0086659 FBtr0091917 2 1 1 65 2R 19727559 19727579 CTATTTGGCCGGATTAATGTG 57 19727514 19727533 CCTTACTCTGCCTTCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33374 FBgn0053374 FBtr0086366 1 1 1 60 2R 15645961 15645979 ATACATCGGTTCTCGTCCG 59 15645919 15645937 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33401 FBgn0053401 FBtr0086393 1 1 1 60 2R 15636004 15636022 ATACATCGGTTCTCGTCCG 59 15635962 15635980 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33440 FBgn0053440 FBtr0086432 1 1 1 60 2R 15621636 15621654 ATACATCGGTTCTCGTCCG 59 15621594 15621612 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30201 FBgn0050201 FBtr0071983 3 1 1 63 2R 18959593 18959612 CGAGTGGTTAAGGAGATGGA 59 18959549 18959567 GACAGGACTTGAACCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Peb FBgn0004181 FBtr0072454 3 1 1 135 2R 21064129 21064209 CGACAATTGATACTCGTCCT 57 21064013 21064031 CTAAGTAACGTAGAGGCGC 57 NA Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 3 2 2 86 2R 20569796 20569814 TTCATAGTCGTAGGCACCC 58 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 CG3608 FBgn0035039 FBtr0072320 1 1 1 80 2R 20500739 20500758 AATCTCTGGCTGAGTATCCT 57 20500801 20500882 CAGATCGCCCTTAATTCCC 58 NA Drosophila melanogaster 61 CG4681 FBgn0069913 FBtr0301624 3 1 1 73 2R 20466566 20466584 CTGAAGAAGCAGGTCACCA 59 20466427 20466446 TGATCCTCTTCCAGAATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 3 4 4 91 2R 20419982 20420000 AATCCGAAACCATGTCCGA 59 20420052 20420129 TTGTCGTATGAAGTTGATGAGG 58 NA InUTR Drosophila melanogaster 61 Brca2 FBgn0050169 FBtr0072302 2 1 1 89 2R 20414491 20414509 AGAACTTGAGGGATGACCT 57 20414562 20414640 TAGTTCCTGGACCTTCCTG 58 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 1 2 3 93 2R 20090333 20093344 CATTGGATCGTAGCATCTTGC 59 20090260 20090278 CTATTGATGAGCTGCCCGA 59 NA Drosophila melanogaster 61 gammaSnap FBgn0028552 FBtr0072187 2 1 1 80 2R 19935378 19935463 GGTCAAACTAAGGAGGTACG 57 19935317 19935335 CCGTAAGATTCCGTTTGCT 58 NA Drosophila melanogaster 61 CG11300 FBgn0034901 FBtr0072090 1 1 1 76 2R 19639867 19639888 CAACCAGAGTAATCAGAATGGA 58 19639925 19639943 ACAATAGACGACGGTGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 1 2 2 87 2R 19132119 19132187 ATGACCGCATTTACTGCTG 58 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 CG13545 FBgn0034828 FBtr0071972 1 1 1 160 2R 19045542 19045618 AGCTTTGGCCCTATTAATCCA 59 19045402 19045420 GAGTAGGTGGTCACAGGAG 58 NA Drosophila melanogaster 61 CG9876 FBgn0034821 FBtr0071979 3 1 1 100 2R 18978477 18978495 TGGAGAAGGTCTTCGAACG 59 18978215 18978414 AAACCAGACCTGAACTCTGG 59 NA Drosophila melanogaster 61 CG3788 FBgn0034800 FBtr0071995 3 1 1 80 2R 18820690 18820708 CATACTCTACCACCTGGGC 59 18820557 18820647 CCCATGCATACAAACCTCAC 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301377 3 2 8 90 2R 18605689 18605707 GACCATCAAGTACGGAGGA 58 18605546 18605635 ATAAACGCGGACCTTACTG 57 NA Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071939 2 1 2 67 2R 18500859 18500877 GATGCCATGGAGTTTGCTG 59 18498885 18500829 CGCCAGAGATTAGAAACTGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 2 4 5 148 2R 17956166 17956252 GGAGATAATTGAATTCCCAGCAG 59 17956360 17956378 TGTCCACAGTCTTCTGCTG 59 NA Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 3 2 2 80 2R 17709902 17709987 CAATCGTGAGATCTTCCCTG 58 17709841 17709859 GGATCCGATTCACAACTGG 58 NA Drosophila melanogaster 61 CG9394 FBgn0034588 FBtr0071567 3 1 1 60 2R 17007004 17007023 GTCCATCGACCTTATTTCGC 59 17007044 17007064 GTACTCAATACGCAGTTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397,FBtr0273396 1 2 2 80 2R 16875162 16875243 CCATAATGAAAGGCTTCTGTG 57 16875102 16875120 GACTCTCGAGATTGTTGGC 58 NA Drosophila melanogaster 61 CG13442 FBgn0034546 FBtr0086240 2 1 1 83 2R 16616808 16617429 TAATCCCGAACAACTCGTG 57 16616743 16616761 CTAATCCAACACTCCAGGC 57 NA Drosophila melanogaster 61 Obp57a FBgn0043535 FBtr0086294 1 1 1 113 2R 16392728 16392798 CAAGCTAAGGAAAGCCAACC 59 16392869 16392892 GGTATCGTCAAACTTCTCATACTC 59 NA Drosophila melanogaster 61 Obp56d FBgn0034470 FBtr0086477 2 1 1 83 2R 15591258 15591277 TCCAACAACATCTCTACCGA 58 15591124 15591212 GATAGTTGCAGCTCAGCAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG9416 FBgn0034438 FBtr0086555 1 1 1 80 2R 15256385 15256468 ACTAAAGAGCATGGTTTACCC 58 15256325 15256346 GGTGATAATGGTCAAGATCAGG 58 NA Drosophila melanogaster 61 CG15116 FBgn0034415 FBtr0086596 2 1 1 84 2R 14943260 14943279 ATACGTTTGGGAATCCAGTG 58 14943142 14943213 GTAAGTCCGCATTTGGAGG 58 NA Drosophila melanogaster 61 CG15082 FBgn0034397 FBtr0086617 2 1 1 89 2R 14718798 14719687 ATTTGCAGGTCCACTACGA 59 14719740 14719758 GGAATTTGACGGTCACGAG 59 NA Drosophila melanogaster 61 GstE1 FBgn0034335 FBtr0086669 1 1 1 60 2R 14285944 14285965 GCTCTGGAATTGTACTCTATGG 58 14285985 14286004 GTAAGTTTGACGGTCCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10916 FBgn0034312 FBtr0086749 3 1 1 60 2R 14061969 14061987 CTTTACCAGGGTATCCTGC 57 14062010 14062029 GGATGTACATGACCTTGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 thr FBgn0003701 FBtr0086825 3 1 1 82 2R 13751944 13752020 AACAAATGTGAGCCCTCAC 58 13751880 13751899 GACCCAAACACTTCATGGTC 59 NA Drosophila melanogaster 61 mthl3 FBgn0028956 FBtr0086955 3 1 1 87 2R 13336829 13336847 CTTCAATTGGTCACAGGGC 59 13336698 13336780 ACCCTTAATCCGTTCCTTCAG 59 NA Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 1 1 1 67 2R 13306529 13306610 GGTGGAGAACTTAAGAAACTTCC 59 13306484 13306502 CATGCAAGGCCATGAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9640 FBgn0034182 FBtr0086972 2 1 1 246 2R 12933620 12933638 ATTGCCAGTATTCTGCGAG 58 12933848 12933923 CGGTCCTTAAATGAGCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Alk FBgn0040505 FBtr0087118 3 1 1 82 2R 12519815 12519833 ACAACTACTGGGATGTCCG 59 12519685 12519773 GGTGGTTAACTCAAGATAGTTGG 59 NA Drosophila melanogaster 61 CG4927 FBgn0034139 FBtr0100547 3 1 1 81 2R 12459849 12459868 TATTGGCCTCAGGAGATTCG 59 12459984 12460002 CACAATGAAGGGAGTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30094 FBgn0050094 FBtr0087233 1 1 1 107 2R 12029788 12029865 TTTCAATGGCAGACGATCC 58 12029934 12029954 TGTTTGTCCCATAGTCAACTC 58 NA InUTR Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219,FBtr0300575 2 3 3 80 2R 11999422 11999496 CTGGAGGATCTGGACACTC 58 11999539 11999558 CTCATCTCGATGTTCGTCCA 59 NA Drosophila melanogaster 61 mRpL34 FBgn0083983 FBtr0111011 2 1 1 112 2R 11986507 11986588 GGAATGCTCCAAAGGACCT 59 11986664 11986682 AAATGGCAGCGTACTTTCG 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0302163,FBtr0301313,FBtr0100388,FBtr0100387,FBtr0087315 3 6 7 82 2R 11669325 11669344 ACAGCGATGAATCTATTGCG 58 11668569 11669280 CTTCTTGAAGTTGACGCCG 59 NA Drosophila melanogaster 61 dup FBgn0000996 FBtr0087387 1 1 1 80 2R 11265923 11267076 GGAGGTGCTTATAAGCCCT 58 11265861 11265880 ATAAGCTCATGTTTGTCCGG 58 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087403,FBtr0087402 3 2 2 106 2R 11100180 11100199 AATAAATTCTGCGAGTGGCT 58 11100042 11100114 GTCACATCCGAATAAATTCCCA 58 NA Drosophila melanogaster 61 Cyp6a23 FBgn0033978 FBtr0087452 1 1 1 115 2R 10764346 10764364 TCAGGATCAACTTAGGGCG 59 10764443 10764526 GAAGGGTTTCCATGACGAC 58 NA Drosophila melanogaster 61 SMC2 FBgn0027783 FBtr0087461 1 1 1 80 2R 10739569 10739590 TGTAAACAATCCCAACTTCCTG 59 10739448 10739529 ATTGACAGAACCTCCTTGGG 59 NA Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 3 2 2 143 2R 10638486 10638657 GAAAGCTGGCTATTACCTATTCG 59 10638365 10638383 CCTGCACAATCACATCCTC 58 NA Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 2 2 2 80 2R 10557359 10557377 GCAGTTTCAATACTGGCGT 58 10557421 10557498 CGTAATACCACCAAGGACG 58 NA Drosophila melanogaster 61 Mdr50 FBgn0010241 FBtr0087537 1 1 1 80 2R 10139352 10139372 ACTGATCAGGAGATCATCTCG 58 10139414 10139494 CGTATCATAACCCAAGGGC 58 NA Drosophila melanogaster 61 IM10 FBgn0033835 FBtr0087654 1 1 2 80 2R 9295383 9295402 GCACTGTCACAATCGATAGG 58 9295444 9295519 TGAAACCGTTTCAGTAGTGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13325 FBgn0033792 FBtr0087722 1 1 1 80 2R 9012886 9012904 TGGCACATGTTCTTCATGG 58 9012945 9013020 GTTAAGCATCATTCCGTAATCC 57 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 3 2 4 116 2R 8739084 8742604 GGATGTGATTGAAGCAATCAG 57 8738988 8739006 CCACGGGTCAGAAATACAG 58 NA Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 3 2 2 101 2R 8668884 8671858 CTGAACCAACTCAGGGAGG 59 8671923 8671941 GATCTCGGAGATCGTCTGC 59 NA Drosophila melanogaster 61 CG13151 FBgn0033750 FBtr0087939 2 1 1 60 2R 8403720 8403741 ATCAATTGCAGATCCTACTACG 58 8403762 8403780 CGCAGAATGTCTCATCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8525 FBgn0033735 FBtr0087927 3 1 1 150 2R 8313253 8313324 AAACCCTGCCCTATGATCC 59 8313435 8313456 GTAAGATCTGTCAGCATCAGAG 58 NA Drosophila melanogaster 61 CG13169 FBgn0033704 FBtr0087997 3 1 1 90 2R 8129155 8130055 CGGAAGTGATATTGAAATGCG 58 8130107 8130125 TTTCTGACTGCTTTGAGCA 57 NA Drosophila melanogaster 61 RnrS FBgn0011704 FBtr0088046 1 1 1 152 2R 7871807 7872333 GTACAAGAAGGCTGAGGCT 59 7871673 7871691 TTCTCGTTTACGATGCCGT 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 1 4 4 80 2R 7786100 7786120 AGCCATTAACCACAATAAGCC 59 7785971 7786059 CCACTGCTTATCCTGTTGAG 58 NA Drosophila melanogaster 61 CG13198 FBgn0033640 FBtr0088072 1 1 1 80 2R 7542790 7542810 CGAACGATTCATCTTTGATGC 58 7542852 7543134 ACCGTCATGTGATTCTCCT 58 NA Drosophila melanogaster 61 CG30026 FBgn0050026 FBtr0300922 2 1 1 106 2R 7296449 7296467 CCCGTTTCTTCCACAAACC 59 7296308 7296382 CAACCCACTCCATAACAATCAC 59 NA Drosophila melanogaster 61 CG13217 FBgn0033590 FBtr0088194 1 1 1 66 2R 7124092 7124110 AAGTTCCTTGCCCTGAGTC 59 7124044 7124062 AATCCACAGGTATGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224 2 1 2 128 2R 6707496 6707582 CTCTACAAGAGCTTTAAGAATGGC 59 6707669 6707687 GCCAGATTGCACATAAGCC 59 NA InUTR Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088357 3 1 2 87 2R 6242781 6243013 CTTCTTAGACAGCGATTCCAG 58 6242714 6242732 CTCGGTACGCTTACAACAG 58 NA InUTR Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088330 1 1 2 85 2R 6027684 6027702 ACTTTGCAAGCCGATTTCG 59 6027749 6027861 CGTCAGATAACACAGCAATGG 59 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 3 2 2 107 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009867 6009885 GGGTGTCAATTTCCACCTG 58 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388 2 1 2 80 2R 5858913 5858988 CAAATATTGCGAAGAAGCTGC 59 5859030 5859048 CTACAAGTGTCCTCATCGC 58 NA Drosophila melanogaster 61 Uba1 FBgn0023143 FBtr0088499 3 1 1 84 2R 5577416 5577498 GATTCCATCAAGAAAGCTCTG 57 5577352 5577371 GATCCTCCCAATAAAGACGG 57 NA Drosophila melanogaster 61 CG30340 FBgn0050340 FBtr0088535 3 1 1 89 2R 5488018 5488038 TGCTTATCTGCTACATAGCCA 59 5487890 5487908 TATAGCTCACTGTCAGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243,FBtr0088529 2 2 2 60 2R 5477216 5477236 ATGCTATGGGATTCGAATCAG 58 5477258 5477276 TGTAACCACATGTCCTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 3 1 2 86 2R 5476751 5476822 CTGACTTCGGCGTTTAGTG 59 5476872 5476890 GTTAATGACCATGGGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33199 FBgn0053199 FBtr0088688 3 1 1 155 2R 4836445 4838227 GTTTAACCTTCGGTCAGGC 58 4836308 4836326 TAAGGCTGAACGAGGACAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Jon44E FBgn0001285 FBtr0088704 3 1 1 64 2R 4579425 4579443 ATCGCTACAACAGCTACTC 57 4579471 4579489 GTTGTTGTCTGTCAGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14757 FBgn0033274 FBtr0088805 2 1 1 80 2R 4060865 4060994 CCAACTACGGTTGACAATGG 59 4060804 4060823 GGAGAGTCCTTCATGTTGGA 59 NA Drosophila melanogaster 61 Pbp49 FBgn0260398 FBtr0300659 2 1 2 70 2R 4018672 4018773 CATTTCTAACAAGGGCCCA 57 4018620 4018638 CTCGTACTCCGAATCGGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 1 2 2 80 2R 3942533 3943252 TATACCTATCAAACAGGAGCCC 59 3942474 3942492 GTATCGCTGCTTGGATCAC 58 NA Drosophila melanogaster 61 CG30493 FBgn0050493 FBtr0088925 3 1 1 141 2R 3589990 3590008 TCCCTACAAGACGCATTGG 59 3590112 3590190 GTACCAACCGAAATCCACAG 59 NA Drosophila melanogaster 61 CG12826 FBgn0033207 FBtr0088943 1 1 1 92 2R 3558424 3558505 GGATCTTAAGCAATTGTACTCG 57 3558353 3558371 TCCAAGTCGTAGTAGGTGG 58 NA Drosophila melanogaster 61 Tsp42Eq FBgn0033138 FBtr0089060 3 1 1 84 2R 2950523 2950542 CAACGAGACCATTTACGACG 59 2950275 2950478 GCAGCAGTGATACTTGATCTC 59 NA Drosophila melanogaster 61 CG12842 FBgn0033131 FBtr0089029 1 1 1 82 2R 2926749 2926953 ATTGGAGGCTTATGGCCTC 59 2926999 2927017 TTATTGGCCTCACTCAGGG 59 NA Drosophila melanogaster 61 CheB42c FBgn0066292 FBtr0086191 2 1 1 80 2R 2832494 2832516 GGTTTAAGTACTGGACCAAACAC 59 2832366 2832454 TTATAACGGTACCACGCGT 59 NA Drosophila melanogaster 61 Tdc2 FBgn0050446 FBtr0086142 2 1 1 89 2R 2573280 2574178 GTAACCAAGTCAAGCTGGG 58 2573209 2573227 CGGACTCGTTGATTATGCT 57 NA Drosophila melanogaster 61 geminin FBgn0033081 FBtr0086147 2 1 1 60 2R 2543643 2543661 AGAGACAGACCCTGAAACC 58 2543601 2543619 GAACCAGTGAGGTTCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 3 3 3 82 2R 1864960 1865499 CCTGCATGTTATTCTTATGTCG 57 1864899 1864918 GTACTTCCAATACGGGACAG 57 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 1 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662530 TTATATCTTGGGCTGGATACGA 58 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081 1 1 3 77 2R 1032363 1035724 AACGATTTATCGCTGTTGGG 59 1035762 1035782 TGATGAGTTCAGAATGTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 2 5 5 80 2R 580449 580530 AATTAGAGGTTATGCGAGTCGT 59 580390 580412 GTAGTGCGAAGAAGTGTATACAG 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 1 5 5 80 2R 580803 580821 CAAGGTTTGGTTCACCCTG 59 580662 580760 TCGATGAGCAGACTCTATCC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2648 FBgn0065055 FBtr0091677 2 1 1 84 2L 8042255 8042273 AACTGTTGTTGCACTGGTG 59 8042189 8042207 GATTGTCTGAAGTTGCCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-C437 FBgn0086032 FBtr0114308 3 1 1 96 2L 4085907 4085928 AATTCCATAACGGATACCTGTC 58 4085985 4086003 GTTCAGTTGTCGCTGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33317 FBgn0053317 FBtr0089856 2 1 1 129 2L 20901288 20901346 TAATTGCCGAGACTGGTCG 59 20901439 20901457 TTGTTACGATAGCGCACCT 59 NA Drosophila melanogaster 61 His2A:CG33841 FBgn0053841 FBtr0091845 1 1 1 60 2L 21498746 21498768 CTAGAATTATTCCGCGTCATCTG 59 21498787 21498806 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 E2f2 FBgn0024371 FBtr0081501 1 1 1 80 2L 21154977 21155117 AGCGTAATCATTACGAGCTG 58 21154916 21154934 TCTTTCCTTGGTTCGTCAC 57 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089945,FBtr0089946 3 3 3 110 2L 20790042 20790132 CATTCCACATACCAGTCGC 58 20789950 20789968 TCCAGGAACTCGTTGTTCC 59 NA Drosophila melanogaster 61 Fs(2)Ket FBgn0000986 FBtr0081392 3 1 1 80 2L 20737438 20737527 ATTTGCGATATAATTCCCGAGG 58 20737567 20737586 CTTTAGGCTCTTCACGAAGC 59 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 3 3 3 181 2L 20687404 20687422 GATCGATGACACCAAGCTG 58 20687058 20687259 CATGGCGTTCTGTGATCAG 59 NA Drosophila melanogaster 61 Victoria FBgn0053117 FBtr0081309 1 1 1 92 2L 19913381 19913456 CAAATCAGCTGCCTTCTCG 59 19913307 19913325 TATTTCTCGGGACTTGGCC 59 NA Drosophila melanogaster 61 CG13958 FBgn0032825 FBtr0081295 3 1 1 60 2L 19827901 19827923 AAGCTAAGGAATCTACCAGTGAG 59 19827943 19827961 AGTAGTTCTCCATGTGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10628 FBgn0032818 FBtr0081323 2 1 1 94 2L 19757883 19757961 CAGCTTATCCCTTTACCACCA 59 19757809 19757827 GATCAGACCGGGAAGATCG 59 NA Drosophila melanogaster 61 CG10366 FBgn0032814 FBtr0081259 1 1 1 85 2L 19584478 19584496 CTCAAGAACGAGGATTCCG 58 19584543 19584640 CCTCGAGTTATATTCACCCAG 57 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 3 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569184 GGGTTTCTCTACATAGGTATGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10337 FBgn0032805 FBtr0081276 3 1 1 100 2L 19546268 19546286 TCAAGACATGGCAGAAGCT 59 19546120 19546205 AGCACAACCGATTATACCGT 59 NA Drosophila melanogaster 61 Hs2st FBgn0024230 FBtr0081288 2 1 1 84 2L 19444549 19444568 CTGATCCTGATAGCCCTGTG 59 19444419 19444502 GCTTGAAGGCATGTTCCAG 59 NA Drosophila melanogaster 61 CG17350 FBgn0032772 FBtr0081199 3 1 1 91 2L 19382122 19382208 CAAACGAAAGAGTCCAAGGAG 59 19382261 19382279 ATTTCGAACGTGATGTCCG 59 NA Drosophila melanogaster 61 CG17350 FBgn0032772 FBtr0081199 1 1 1 90 2L 19382123 19382208 AAACGAAAGAGTCCAAGGAG 58 19382261 19382279 ATTTCGAACGTGATGTCCG 59 NA Drosophila melanogaster 61 CG17349 FBgn0032771 FBtr0081198 2 1 1 96 2L 19370650 19370669 ACTAAGACAAACGAACGTGC 59 19370728 19370811 GAACTTCACGTACTGGCAC 59 NA Drosophila melanogaster 61 CG10750 FBgn0032769 FBtr0081196 1 1 1 84 2L 19301274 19301292 TCTACAACCTGGACAAGGA 57 19301340 19301412 CTGGGAACAATGTCTCGAC 58 NA Drosophila melanogaster 61 Aats-asn FBgn0086443 FBtr0081162 2 1 1 86 2L 19131682 19131811 CTGAGTTAACCTTGGGTGC 58 19131614 19131632 TCTTGAAGGGCTTGGACTC 59 NA Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 1 1 1 136 2L 18615745 18615763 CAGTGTTCAAATGGAGCCC 59 18615502 18615645 TTTGGAACATTCGACGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 amos FBgn0003270 FBtr0081081 2 1 1 60 2L 18596604 18596623 CAAGGTACTGGAACAAGCAG 58 18596563 18596581 GACATGGAAGTGGACAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 3 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128062 18128145 CTTATCCTTGTGCATCTGGT 57 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 2 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128061 18128145 CTTATCCTTGTGCATCTGGTG 59 NA Drosophila melanogaster 61 CG31804 FBgn0051804 FBtr0080967 1 1 1 60 2L 17363799 17363818 CGAAAGCTAGTCAAGACCTG 58 17363841 17363859 CTTTGCTTCTGTGGTTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42556 FBgn0260758 FBtr0301255 3 1 1 60 2L 16890514 16890533 TTTCTTCGTTGGATCAGCCT 60 16890556 16890574 ACCAAAGTCTGTTCATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5869 FBgn0028894 FBtr0080851 3 1 1 81 2L 16302570 16302588 AAGCAACGAAGTTCTGGAG 58 16302441 16302528 GTCGACTTTCAATATCAAAGCC 58 NA Drosophila melanogaster 61 CG18518 FBgn0028900 FBtr0080814 3 1 1 60 2L 15835559 15835580 CAAACAATTCAGCCGATAAGGA 59 15835520 15835541 GTGATTGATAGAGACTCTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wek FBgn0001990 FBtr0080764 2 1 1 82 2L 15768154 15768172 TGTATACAAAGTGCGCGAG 58 15768030 15768108 GTTCCTCGAGGGTCATCTC 59 NA Drosophila melanogaster 61 CG11865 FBgn0028947 FBtr0080753 1 1 1 60 2L 15617185 15617203 GTCTACAGTTATGCCGGAG 57 15617294 15617315 CCATTGCACTTTCAATACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 nimC3 FBgn0001967 FBtr0290243 3 1 1 61 2L 14020112 14020130 CTCGTCCTGATGACGATCC 59 14020069 14020087 CAATGACCGTTGGTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimB1 FBgn0027929 FBtr0080585 3 1 1 67 2L 13964688 13964706 CTTCCGAGGATACGAGGTC 59 13964736 13964813 CGTATTTGCCGCAGAATCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 2 2 2 69 2L 13668754 13668772 CATATTCCGTCCGGAACTG 58 13668805 13668881 ATAGTCCTCCACAGTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15638 FBgn0028943 FBtr0080516 2 1 1 147 2L 13535535 13535553 TTTACGTCCAACCAGGAGG 59 13535406 13535424 CATCCACATTCAACCGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9306 FBgn0032511 FBtr0080472 3 1 1 174 2L 13370846 13370864 TTAGAGTCGTGGTACGACC 58 13370553 13370630 CACTGTTGGCAAAGTTTCG 58 NA Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477,FBtr0302306 2 2 2 60 2L 13306359 13306377 TATCTATTGCCCGAATGCC 57 13306317 13306338 CAACGAATATGAACCAAGTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15482 FBgn0032483 FBtr0080487 3 1 1 60 2L 13210894 13210914 TTAGATGTTTGGCAGCAATCG 59 13210854 13210875 ATATACTTGCCTCGCTAATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 3 3 3 247 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976948 GAGTACTTGGACAGAGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 3 2 2 80 2L 12914446 12914467 CAAGTCAATCATCAATGACCGA 59 12914505 12914636 AGGGTGAGTTTAAGTTAATGCC 59 NA Drosophila melanogaster 61 CG5776 FBgn0032450 FBtr0080407 1 1 1 80 2L 12704038 12704057 TGGTTAGGATTGTATGGCCC 59 12703919 12703997 TGCAATGGAGTTTGAAATCCC 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 2 1 8 119 2L 12498562 12498580 CTCAATAATGATCGCGGCT 58 12458212 12477121 CTTGACCAGATCCATTGCC 58 NA Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899,FBtr0089898 2 2 2 200 2L 12432482 12432500 CGATCATACTCCCGTTCCC 59 12432196 12432319 GAGTCATATCTCGCACTCCC 59 NA InUTR Drosophila melanogaster 61 CG31763 FBgn0051763 FBtr0080356 1 1 1 60 2L 12374055 12374074 CGATAACGGCAACGTATTGG 59 12374094 12374115 TTACCTGGAACTAAATATGGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18789 FBgn0042127 FBtr0080315 1 1 1 61 2L 11995169 11995245 GTTAAGCAATATCTCAAAGCCG 58 11995129 11995147 GACAAAGGCCACATCTTGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 cana FBgn0040233 FBtr0091678 3 1 1 80 2L 11277188 11277264 GTGCCAAAGAAATCCAGCA 59 11277308 11277326 CTGCTTACGGTTCTCATCG 58 NA Nonspecific Drosophila melanogaster 61 CG16854 FBgn0032338 FBtr0080194 3 1 1 60 2L 11089193 11089213 GACAATACGTTTCCCAATCTC 57 11089233 11089253 GATTCAGTTCCTGATCATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0113035 3 1 2 118 2L 11018329 11018347 GCAGGATATGTACCAGGGA 58 11018496 11018515 AAAGAGCTGTGTTATTCGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Samuel FBgn0032330 FBtr0080161 2 1 1 82 2L 11029046 11029065 TTAACTCCTGGTCTGTGGAC 59 11014641 11029001 ATCACGAAACGACTGAACG 58 NA Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080137 2 1 2 145 2L 10790357 10790435 TAGGAACTATGGACCTGGAC 58 10790540 10790561 CTTTATCCACCTTATAAGCAGC 57 NA Drosophila melanogaster 61 Nup107 FBgn0027868 FBtr0080121 3 1 1 211 2L 10733952 10733970 ACAAGGCGTATCTGTCTGG 59 10733695 10733778 GAGTTCGATGGTTTGCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Lip2 FBgn0024740 FBtr0080123 3 1 1 94 2L 10706150 10706168 GCGCCATCAAAGTAATGCT 59 10705870 10706092 CCAGTCCATCGTAGTCCAC 59 NA Drosophila melanogaster 61 CG31717 FBgn0051717 FBtr0079977 2 1 1 92 2L 10250818 10250905 TATGAGGACGTCATCACCAG 59 10250960 10250978 AACGACAGATTGGAGACGG 59 NA InUTR Drosophila melanogaster 61 CG5734 FBgn0032191 FBtr0079960 3 1 1 60 2L 10205774 10205794 CAGCTGGCCTTTGAATATCTG 59 10205734 10205755 CACTGTTAATAGTGATCCAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199,FBtr0079842,FBtr0079841 1 3 3 90 2L 9621336 9621356 CATATTCCACGATTGCACTGG 59 9621405 9621487 AGGGCATACCAAATCGATAGAG 59 NA Drosophila melanogaster 61 CG13108 FBgn0032100 FBtr0079773 3 1 1 81 2L 9164830 9165025 CTTTACCTCCAGTTCTGTATATTCC 59 9165062 9165082 ATCCAAGCAGTTGACTTTGAC 59 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 1 3 3 80 2L 8938686 8938704 TTCATTCTGATCGCAGTGG 57 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 CG13088 FBgn0032047 FBtr0079681 3 1 1 80 2L 8490118 8490136 AAGTTCTGCTAAGTCGCAG 58 8490177 8490253 AATCCCGTAGAACTTTACTAGG 57 NA Drosophila melanogaster 61 Chrac-14 FBgn0043002 FBtr0100267 2 1 2 62 2L 8440883 8440901 TCTCTTCGAGCCAAAGGAG 59 8440925 8441037 TCTTTGATAATCTCCTCCGGA 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 3 2 2 105 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332387 8332405 GTACTGGTTGTCCCTCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7806 FBgn0032018 FBtr0079600 3 1 1 84 2L 8315079 8315160 CTGAAGAAAGTCATGTTTGCCA 59 8315205 8315223 TGGTGTCCGAAGAGAATCG 59 NA Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079633 2 1 2 124 2L 8212779 8212797 TCGTTTCATGGGCATTACG 58 8212599 8212617 GATCGGAGGCAGTCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 2 2 2 107 2L 8210627 8210645 AAGGGCTATCCCGAAACTG 59 8210462 8210556 GGCTGACTTCTCCTCATCC 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185,FBtr0300184,FBtr0079531 3 3 3 135 2L 7985761 7985844 CGAAACCAGTGGCATTGAC 59 7985941 7985961 CTGGTTGAGAAATTCCGACAG 59 NA Drosophila melanogaster 61 lectin-28C FBgn0040099 FBtr0079527 2 1 1 60 2L 7857401 7857421 GTCAGAACTTAAGATGGAGGG 57 7857438 7857461 CGTTATACTAGTCAATGCTTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 1 2 2 60 2L 7817639 7817737 ACCTGTATAGATTGTCAGGACTC 59 7817755 7817775 ATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13793 FBgn0031935 FBtr0302518 3 1 1 82 2L 7719033 7719051 CATCCATTCCTACATGGGC 58 7718909 7718990 AACCCATGCCTTTAAATAGAGG 58 NA Drosophila melanogaster 61 CG4496 FBgn0031894 FBtr0079419 2 1 1 144 2L 7186939 7186960 GGTCGAGGAGATTAGTAAAGAG 57 7186751 7186834 GGGAATGGTCTTTCACCTG 58 NA Drosophila melanogaster 61 Pvf2 FBgn0031888 FBtr0079423 3 1 1 154 2L 7083308 7083328 CGTATCTCATCCGATTGATCC 58 7074345 7083192 ATAGTCATCGCTCCCATCG 59 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079399,FBtr0079398 2 3 3 123 2L 7051531 7051549 GAAACCGATCTCAAGGCCT 59 7051635 7051768 TGGGAGTGTCAGTATCTGTG 58 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251,FBtr0079250 2 2 2 80 2L 6344882 6344903 GAGTATTGTACTGACGAGAAGG 58 6344941 6345047 CTGGTATTTCTCCTTTCCTTCG 58 NA Drosophila melanogaster 61 CG13984 FBgn0260452 FBtr0079247 2 1 1 60 2L 6309099 6309117 GGGAGTATGGGTATGACCG 59 6309139 6309159 CTCACAAGCCAATCACTAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9162 FBgn0031778 FBtr0089943 2 1 1 93 2L 6078629 6078698 CCGTATACATTACTAAACTACAGGC 59 6078746 6078767 CGAATAAGAGTTCAGAGGACTG 58 NA InUTR Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 3 2 2 89 2L 6024380 6024453 GGAGGGCTATGTAGTGGTG 59 6024309 6024327 ATCAGACGGATGAAGTGCT 58 NA Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079131 2 1 2 84 2L 5445157 5445175 AAAGCCATAAACCGCACAC 59 5439273 5445110 ACAACTGTCGTGTAGTCTCC 59 NA Drosophila melanogaster 61 CG14022 FBgn0031700 FBtr0079080 1 1 1 82 2L 5328369 5328578 ATGTACAAGGCCTGAATCTC 57 5328306 5328324 TTTGCTGTTCTTCACCCAG 58 NA Drosophila melanogaster 61 cype FBgn0015031 FBtr0079072 1 1 1 62 2L 5327630 5327648 ATTCTGGTCAACGATCCCA 58 5327674 5327759 GTTGGCATCGTACTTCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4230 FBgn0031683 FBtr0079019 3 1 1 82 2L 5098026 5098103 AACTATCAGGGTCCCAAGC 59 5098149 5098167 TTGGTGGTCTCATAGCTGC 59 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 1 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 2 2 2 60 2L 5039691 5039709 TCTACAAGGATGGCAAGTG 57 5039733 5039819 GGCTCATCAATCTGATCCA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079051 2 1 2 119 2L 4971138 4971157 AGATCTGCGACATCAATGTC 58 4970769 4971059 CACCCTTAATCATATTCTTGGC 57 NA Drosophila melanogaster 61 CG34125 FBgn0083961 FBtr0110839 3 1 1 63 2L 4965785 4965804 CTTACGACTATCGCCATTCC 58 4965889 4965907 TCTTCATACGTTGGCGGAG 60 NA DesignNoJunction Drosophila melanogaster 61 jet FBgn0031652 FBtr0110896 1 1 2 166 2L 4948900 4948918 TATCTCCGACTATGGCGTG 58 4948414 4948432 GGTGATGTTGCACAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 3 4 4 103 2L 4845328 4845346 GTAATTCGGGCAAGTTCCC 58 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 CG42523 FBgn0260428 FBtr0300851 3 1 1 60 2L 4763454 4763473 CCAAACGATTGTCAGTCCTC 59 4763493 4763514 GTCAAATGGTGCAAGTTTATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34351 FBgn0085380 FBtr0112561 1 1 1 80 2L 4717790 4717809 TGTTCCTACGTGAACTTGTG 58 4717851 4719813 CTCGGTTCTCATAATAGCCG 58 NA Drosophila melanogaster 61 mRpL27 FBgn0053002 FBtr0077451 2 1 1 175 2L 4459368 4459386 GAATAAGAAGGGCCATGCG 59 4459153 4459171 CATAAACCTTGCCGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31958 FBgn0051958 FBtr0077495 3 1 1 64 2L 3786137 3786155 GAGATGATACGCGAGTACG 57 3786183 3786201 ATGTTGTTGGACTCCTCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 2 1 1 75 2L 3509846 3509864 CTTCGTCCCATATTTGCGG 59 3509722 3509808 TTACCATATGTGCAATGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 2 2 2 165 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466926 3466944 GACAATCTCGTTGTCGACC 58 NA Drosophila melanogaster 61 sec5 FBgn0031537 FBtr0077519 3 1 1 91 2L 3458120 3458138 GAACATCCGAGACAAGCTG 58 3458191 3458265 CGCTAATGGAGTTCTCTATGG 58 NA Drosophila melanogaster 61 Sfp23F FBgn0259949 FBtr0300295 3 1 1 207 2L 3387652 3387670 ATTTGGCTGTGTTTCAGCT 58 3387395 3387415 GCCATAAGACTACTCTTTGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GABPI FBgn0031495 FBtr0077652 3 1 1 81 2L 3030936 3031008 AGTTTGCACAAGACTTGTCAC 59 3031051 3031069 CAGTCTATCCTGGAAGGCG 59 NA Drosophila melanogaster 61 p16-ARC FBgn0031437 FBtr0077694 3 1 1 107 2L 2580570 2580650 CAGAATGTGAAGGACCACG 58 2580720 2580739 TATTAGGTCGTTCTGGTCCA 57 NA Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077788,FBtr0077787 2 2 2 60 2L 2415909 2415928 GAATTCGACTGCTCTTTGCT 59 2415868 2415886 GGAGAAGCCAATCACTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17237 FBgn0031410 FBtr0077801 1 1 1 60 2L 2288674 2288693 GTAGGATCAACAAAGACGGC 59 2288633 2288656 CCATAGATAATGTCTTGAACCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17234 FBgn0042187 FBtr0077753 1 1 1 60 2L 2253764 2253782 CCAGTGCATTCTTCGTCAG 59 2253803 2253824 GAGGCAATAGCATTTAAGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr3 FBgn0053516 FBtr0300671 1 1 1 80 2L 2065664 2065682 ATAGCGGCATCTACGAGTG 59 2062291 2065623 GGGAGATTTCGATGATGTTCAG 59 NA Drosophila melanogaster 61 CG15353 FBgn0040718 FBtr0077863 2 1 1 103 2L 2007043 2007142 TGAAGCTGGTACTCCTCCT 59 2006958 2006976 GTAGACAAACTGTGGCACC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 1 1 1 61 2L 1883777 1883795 CTGTTGAATGTCCTTGCGG 59 1883184 1883755 TTCAAGATGGATTCAAGTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17650 FBgn0031365 FBtr0077901 1 1 1 116 2L 1759008 1759032 CGTTTATAATGACTATCCCATGGAG 59 1758642 1758935 GCTTCGAATTGTTGTTCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15446 FBgn0031155 FBtr0300353 3 1 1 119 X 20972941 20973057 CTACGAAGCTGCTAGAATTATCC 59 20972844 20972862 ATTTGGCGATACGAAACGG 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 2 2 2 97 X 5808426 5808621 GGCAAGAGGTACTACGGTG 59 5808347 5808365 CACTTCTCATCGTCCAGGT 59 NA Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 2 2 2 81 X 4551096 4551186 TCAAGCTGAATACCGAATTGAG 58 4551228 4551246 GAATCATCCTCCGAATCGC 58 NA Drosophila melanogaster 61 CG5959 FBgn0039387 FBtr0084940 3 1 1 93 3R 21724994 21725079 TTGCGCAATATTCAGGAGC 59 21725134 21725154 CAGGAATTTGCACAGTATCCT 58 NA Drosophila melanogaster 61 Gr93b FBgn0045470 FBtr0290236 2 1 1 78 3R 17668463 17668482 GATAGCCAGAGTTACCACCA 58 17668347 17668365 CCAAAGGAAACACTCGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr92F FBgn0038819 FBtr0083919 3 1 1 194 3R 16495457 16496868 AGCCATTCTTTATTGCCGC 59 16497025 16497044 CATCCACGTAGGAGTAGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083688 2 1 2 81 3R 14502546 14502622 GAGCTCATAGAATCCCGTC 57 14502483 14502501 CATCGTACAGGATTTCGGT 57 NA Drosophila melanogaster 61 CG7587 FBgn0038523 FBtr0083460 2 1 1 154 3R 13420470 13420488 CAAGTGCTTCCTTGGATGG 58 13420604 13420681 AGCTGATATAGGGTTTGTTGC 58 NA Drosophila melanogaster 61 CG14332 FBgn0038509 FBtr0083446 1 1 1 60 3R 13247829 13247847 GGATCGTATTTGTCGTCGG 58 13247787 13247805 TAGCTCCAGACTGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4009 FBgn0038469 FBtr0083430 2 1 1 70 3R 12860534 12860552 TTTAGATACGCCCACACCC 59 12860417 12860439 GTTCTATTAGATCTCCGATTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32855 FBgn0052855 FBtr0083234 2 1 1 60 3R 11906040 11906059 TGCTTCAAAGCTTTGACCAG 59 11905999 11906023 GCTAATATAATTCCCTCCAAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS9 FBgn0037529 FBtr0081766 2 1 1 87 3R 3728020 3728038 GAGTTCCAGATCGGAAAGC 58 3727893 3727970 ATATCGCCTCGTCTATGTCC 59 NA Drosophila melanogaster 61 CG1142 FBgn0037504 FBtr0081559 2 1 1 83 3R 3299032 3299051 AATCCAGGACTAGAACAGGC 59 3298555 3298986 CTTTGAGCGTTCAGCTCTG 59 NA Drosophila melanogaster 61 TMS1 FBgn0028399 FBtr0075389 1 1 1 80 3L 16407063 16407144 TATCTACTTCACCACCAGTACTG 59 16407180 16407202 CTAATCGCCAGACAGAATATGAG 59 NA Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 1 2 2 95 3L 4538172 4538264 CTATGTGAAATATCCCAAGGTGG 59 4538319 4538337 AACTTGATGCTCAGTCCGA 59 NA Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 1 2 2 93 2R 19873906 19874867 ATTCCCAGATCGTATACGCT 58 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 3 2 2 94 2R 19792044 19792062 ATGTTTGGCTTCAGCTTCG 59 19792119 19792195 ATATCGCACGTGTCTATGCT 59 NA Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 1 2 2 86 2R 13300527 13300545 ATTGGAATTTGCACGCCAG 59 13300653 13300671 CTTCTCCACAGTACTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 krimp FBgn0034098 FBtr0087189 2 1 1 153 2R 12126623 12126641 GCAGTTCTTGGCTTTCGTC 59 12126417 12126435 GAGCTCTAGCTAGCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33462 FBgn0053462 FBtr0087284 1 1 1 80 2R 11584871 11584956 GGTGGAGTACTTAAATCACATACG 59 11584995 11585013 CAGGTGAGCTGGTCTATCG 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 2 3 3 80 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251531 10251549 TGAGGTTGTACTTGAGGCC 59 NA Drosophila melanogaster 61 l(2)k10201 FBgn0016970 FBtr0088505 1 1 1 60 2R 5286984 5287004 AAGGATCACTGCATCATAACG 58 5287025 5287044 TCTTGCTATGATCAAAGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 3 2 8 86 2L 12536279 12536297 AATGCAGAGTCCGAGACTG 59 12458212 12477121 CTTGACCAGATCCATTGCC 58 NA Drosophila melanogaster 61 CG7309 FBgn0032314 FBtr0301184 3 1 1 80 2L 10908541 10908612 AACTCCAGTACTGATTTGCC 57 10908480 10908501 CCTCTGGCCATTAAATTTAGGA 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301005,FBtr0301006 2 3 3 80 2L 10581308 10581327 GCATGAACACAACTCAAGGA 58 10581192 10581269 GCAGCCAGTATTTCATATCAGTC 59 NA Drosophila melanogaster 61 cl FBgn0000318 FBtr0079095 2 1 1 225 2L 5520414 5520432 ACAACGTCAAGGGATACGA 58 5520694 5521147 AAATCCTTCCAGTATGCCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG4267 FBgn0031405 FBtr0077751 1 1 1 81 2L 2242931 2243566 ACGTCATCAAACAAGGATAGTC 58 2243606 2243626 GTATGCGTTCTTAACCTTCCT 58 NA Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 3 2 2 259 2L 542544 542564 ACTTATACCTTTAGCGAGCAC 58 542226 542244 GTGTAATAGCAATGCCGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11912 FBgn0031248 FBtr0078099 2 1 1 60 2L 318790 318809 TTTCCGCAGTAAGTCTTCCT 59 318749 318768 CCGTACAGATATCCATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL10 FBgn0031231 FBtr0078124 1 1 1 142 2L 203881 204003 GATACAAAGAAGCCTTTCCCTG 59 204106 204124 GATATTTCGGCTGCGTGAC 59 NA Drosophila melanogaster 61 CG31607 FBgn0051607 FBtr0079579 1 1 1 128 2L 8154039 8154166 AGAAGAGGATCAGGTTATTCCT 58 8154255 8154273 CAATGTGGATGATCTCGCC 58 NA Drosophila melanogaster 61 CG4318 FBgn0030455 FBtr0301690 3 1 1 60 X 13048638 13048660 GGTCAGTGAGATGAATTATGAGG 58 13048600 13048620 CTCAATCAGTTCAACATCGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 2 3 3 162 2R 3106662 3107969 CATGATAACGAGGTTCGTTACTG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 1 7 9 138 X 18267245 18267336 AAATCCCTCCAACCTTTCC 57 18267438 18267456 ATCTTATTGTACGACGGCC 57 NA DesignNoJunction Drosophila melanogaster 61 PGRP-SB2 FBgn0043577 FBtr0075320 2 1 1 111 3L 16719909 16719928 GATGGTCGAATCTACGAGGG 59 16720000 16720080 GTAATCCAGTCTGGAAGTTGC 59 NA Drosophila melanogaster 61 tai FBgn0041092 FBtr0079794 2 1 1 80 2L 9241541 9241616 CTGCTCAAGCTACTAAACGA 57 9241657 9241677 GGAGTTGTTCATAGAACCTGG 58 NA Drosophila melanogaster 61 CG13043 FBgn0036600 FBtr0075434 1 1 1 87 3L 16298665 16298683 ATGTTGTCGAGGATGTCGT 59 16298596 16298614 TAGGAGGTGTGAACCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 3 2 2 82 3L 13507889 13507968 AGGACAATTGCCGAAAGTG 58 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 pxt FBgn0038538 FBtr0083508 1 1 1 82 3R 13547546 13547625 GCCATTCCAGTGTTGATGG 59 13547666 13547689 CATCACATCTGGTATATTGACCAC 59 NA Drosophila melanogaster 61 CR32657 FBgn0052657 FBtr0073625 2 1 1 111 X 11981447 11981465 TTTATAGCTCCGGCAACAC 57 11981598 11981616 GATGCAAGCTACTCGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG9576 FBgn0031091 FBtr0070027 3 1 1 242 X 20056466 20056576 AACTGCTTGTACCTCAGCT 59 20056242 20056260 GAACGAGTTGTACGTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12200 FBgn0031018 FBtr0074710 1 1 1 60 X 19369439 19369457 GATCTCCAAGTTCCAAGCG 58 19369481 19369499 CAACTGACGGTAGAAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Him FBgn0030900 FBtr0074549 2 1 1 93 X 18103820 18103839 GATTTCTAGCCGAGAATGCG 59 18104288 18104308 TCCTGATCGTTATCCTGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32557 FBgn0052557 FBtr0074466 1 1 1 164 X 17748760 17749266 ACCTCCAGTCCAAATTCCG 59 17748614 17748632 ACACCTCGATGTTCATCCC 59 NA Drosophila melanogaster 61 l(1)G0136 FBgn0026666 FBtr0074084 2 1 1 106 X 15628445 15628463 AAGGCCGGAAGTTAATCCC 59 15628633 15629143 CTTTAGGCCAACCATGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0073996,FBtr0112985 3 2 2 60 X 15074906 15074925 CAAGGAGATCGACTACATGC 58 15074946 15074966 GTAGATGCCAATTCCGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL37a FBgn0030616 FBtr0074027 1 1 1 119 X 15033097 15033115 CAATAAGACGCACACCCTG 58 15032931 15033014 TTCACGGACCAGTTGTAGG 59 NA Drosophila melanogaster 61 Ste:CG33244 FBgn0053244 FBtr0300093 1 1 1 110 X 13944786 13944804 TCTGATACACAGCTGGACG 59 13944634 13944712 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 m FBgn0002577 FBtr0073555 2 1 1 80 X 11660924 11661022 TTTCCGTGGTGACAATGTG 58 11661066 11661084 ACAATTCCACTAACAGGCG 58 NA Drosophila melanogaster 61 CG9806 FBgn0030222 FBtr0071506 1 1 1 80 X 10520263 10520281 CTTTGGAAAGCCGTATCCT 57 10520145 10520220 CCTAAATGCTCGTGACTCTG 58 NA Drosophila melanogaster 61 CG32695 FBgn0052695 FBtr0071398 2 1 1 84 X 9767823 9767841 GGAATGCTCCTTGATGTGC 59 9767694 9767775 TTTAGACACGCCTTCTGCA 59 NA Drosophila melanogaster 61 Ppt1 FBgn0030057 FBtr0071225 2 1 1 80 X 8583041 8583060 CAATACTACACCACTGGGCA 59 8582921 8582998 CTTGTCCAGTCCCAGATCC 59 NA Drosophila melanogaster 61 CG3040 FBgn0029925 FBtr0071038 3 1 1 60 X 6866534 6866552 TCTCGATGGCTACGATGTC 59 6866492 6866513 CTAGAACATCTTCTTCCTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dx FBgn0000524 FBtr0070914 1 1 1 139 X 6431034 6431121 TGTTTACGACATTGCATCGG 59 6431223 6431241 CAATCTTGAGGAAGCGCAG 59 NA Drosophila melanogaster 61 CG3033 FBgn0029818 FBtr0070830 3 1 1 114 X 5765290 5765380 ATTCCGTGATTTATGGCAACTG 59 5765197 5765215 AGGTAATCTGCGTAGTCGC 59 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070793 3 1 2 194 X 5389801 5389888 CAGACTTGCTGGATAATGAAAGAG 59 5389630 5389649 GTACTTGAAGACGAAAGGCG 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589,FBtr0290088 2 5 5 80 X 5118230 5118249 TCCTCACCTCAATGAAGGTC 59 5118290 5118398 TCATATACCACTTTCGTGGCT 59 NA Drosophila melanogaster 61 CG3081 FBgn0025613 FBtr0070693 3 1 1 69 X 4534805 4534823 CGGGCAAGGATCTAATCTC 57 4534754 4534773 GATACGGATACGGGATCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14265 FBgn0040393 FBtr0070541 2 1 1 100 X 3130633 3130651 TGATCTGTGCCCTGTACAG 59 3130551 3130569 GGTTGTCGAAGTGCTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4116 FBgn0029649 FBtr0070561 2 1 1 60 X 2961288 2961307 TCAAACACCGGTATCAACTC 58 2961247 2961267 CCAGCATATCCTGCTTATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14421 FBgn0029644 FBtr0070554 3 1 1 79 X 2835654 2835672 ACTTCCAGATCTTCGGTCG 59 2835714 2835733 TAACAGATCGGTCAGCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0070546 2 1 2 116 X 2787182 2787262 ACATGAACTGAGTGGTTCG 57 2787341 2787360 TAGCGATAGAAGGTCATCCT 57 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0112811,FBtr0091965,FBtr0091966,FBtr0091962,FBtr0070451,FBtr0091963,FBtr0091964 3 8 8 80 X 2378543 2378665 AATGCGTTGGAGCAATAGTC 59 2378482 2378503 CCTTGGACTTCAACATTCTCTG 59 NA Drosophila melanogaster 61 CG14054 FBgn0029596 FBtr0070338 2 1 1 109 X 1960052 1960071 GAATACTGTACCGACTGGGA 58 1959909 1959980 CAGATTTATCCAGCGCCAG 58 NA Drosophila melanogaster 61 CG32815 FBgn0052815 FBtr0070166 1 1 1 72 X 827299 827317 GAGGATACGCAGCTACCAG 59 827493 827511 TTTCTTCCCTGGACCTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18273 FBgn0029525 FBtr0070094 2 1 1 82 X 379111 379134 CTTTGTTCTATACAGGGATCTCAG 58 378990 379076 GCATAAGATCTATTAGTAGCTCCAG 58 NA Drosophila melanogaster 61 Su(Ste):CR42440 FBgn0259871 FBtr0300169 1 1 1 82 U 9697117 9697135 ATACATCAGTTCGGAGCGT 58 9697053 9697071 AGGAGATATTCGGACACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42408 FBgn0259839 FBtr0300139 1 1 1 60 U 6161976 6161995 GCAATTAAACAGATTCCGCA 57 6161935 6161955 TGAGGTGTATTAGTAGGTGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302581,FBtr0114112,FBtr0114111 3 3 4 183 U 1243009 1243027 TAGCGTTAGTGGTACCTCG 58 1243171 1317231 GTTCAGCAATTGTTGTTCTCTG 58 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 1 3 3 76 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 2 5 5 81 3R 26212315 26213203 CCTATGGAGATTTCAAGTGCTC 59 26212255 26212273 CCCTTTATGCAGGCATCCT 59 NA Drosophila melanogaster 61 Jon99Ciii FBgn0003357 FBtr0085502 2 1 1 132 3R 25748098 25748116 CAAGGTGCCTTACATCGTG 58 25748212 25748230 GTTGATGGTCACTCCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531,FBtr0085532 1 2 2 60 3R 25643315 25643335 TTCCGTACATAGTGTCCATCC 59 25643275 25643293 TTTATTATGGAGCCGCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0110908,FBtr0085437 1 4 4 80 3R 25143607 25143625 CACTTCATATTCCGGCACG 59 25143221 25143563 TTCCAAACGGTTCTTTGGC 59 NA Drosophila melanogaster 61 CG14508 FBgn0039651 FBtr0085406 3 1 1 270 3R 25029765 25029783 GCCATCAAAGGAGGAAGTC 58 25029332 25029350 GCGATTTCCAGTAAAGCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0301306,FBtr0085308 1 3 3 80 3R 24520578 24520596 CTCCTTCTATCCCACCCTG 58 24520637 24520717 AGTGATATGTATCTCAGCACCA 58 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125,FBtr0085126,FBtr0085124 2 3 3 80 3R 23058588 23058665 GCATCTAAACGCCACTGTG 59 23058526 23058546 AAATCCTCTTTCATCAGGGCA 59 NA Drosophila melanogaster 61 CG34292 FBgn0085321 FBtr0112488 1 1 1 60 3R 22888481 22888500 GCCTTTAAATGGCTAGCCAC 59 22888520 22888541 AGTACCCATCGTAAATTGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmdelta FBgn0002734 FBtr0084954 1 1 1 60 3R 21823769 21823789 CACATATTCTCTACGGTTCCC 58 21823811 21823829 ATTGCTTCATCAGGTGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHKov2 FBgn0039328 FBtr0084849 2 1 1 82 3R 21156190 21156208 TTGTATGCCCTTCCTGGAG 59 21156076 21156150 GTTGAGATGTATAGTCGCTTATGAG 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113349 2 1 5 110 3R 21149461 21151162 ATCAAGCTTGTTGCTCAGG 58 21149369 21149390 CACTAGGTTATCATGGTACACC 58 NA Drosophila melanogaster 61 cdc16 FBgn0025781 FBtr0084377 2 1 1 80 3R 19107617 19107638 AATCCATATACTGCTTTGAGGC 58 19107677 19107751 GCATTAGCTCAAACTCTTCCC 59 NA Drosophila melanogaster 61 CG4721 FBgn0039024 FBtr0084317 3 1 1 60 3R 18590492 18590513 CACGGACTTATTCTGAACATGG 59 18590453 18590471 TCCACTGGAGAACACTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 3 4 4 148 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446567 18446654 GAGTAGTTCATCTTGGTGCTC 58 NA Drosophila melanogaster 61 CG5376 FBgn0038977 FBtr0084292 1 1 1 81 3R 18313860 18313944 CAGATATTCAAGGATCTTAAGTCCG 59 18313803 18313822 GCTATTTCTTGGCTTCTGCC 59 NA Drosophila melanogaster 61 CG13857 FBgn0038958 FBtr0084234 2 1 1 81 3R 18219774 18219795 TCGTTAGCATTTCGATTAGGAC 58 18219233 18219734 TTACCCATTTGATAGCTGGTC 57 NA InUTR Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0301007 3 1 2 113 3R 17704028 17704052 CTGTTATCCCTATATGAAGTACCAC 58 17703784 17703957 AAGAGCATTGGTAAGCCCA 59 NA Drosophila melanogaster 61 CG3337 FBgn0038871 FBtr0084107 2 1 1 107 3R 17049041 17049059 AGAACGTTCTCAGCTTCCT 58 17048890 17048908 TTAGAGCACCACAATGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084024,FBtr0301585,FBtr0112916,FBtr0084019,FBtr0301587,FBtr0084020,FBtr0110939,FBtr0084021,FBtr0110937,FBtr0112915,FBtr0301586,FBtr0084018,FBtr0110938,FBtr0084022,FBtr0301589 2 16 16 119 3R 17037304 17037480 GATGTGATTAATCTCGCCGC 59 17037562 17037580 CGATTCGTCCAGATTGCAC 59 NA Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083861,FBtr0083860,FBtr0302327 3 3 3 60 3R 15688814 15688835 CAATTCATGTGGGCAATAAGAC 58 15688775 15688794 TGAAGTTCCACCTTGTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 1 4 4 80 3R 15444448 15444530 CATGAACACAGAGCTTAACTG 57 15444388 15444407 ACGGAGCCAATAAAGAACAG 58 NA Drosophila melanogaster 61 CG7695 FBgn0038631 FBtr0083694 3 1 1 92 3R 14442876 14442894 GCAGATCTTCCAGGAGGAG 59 14442737 14442824 GAAATAAATGAGTACGGCCTCTC 59 NA Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083397 3 1 2 113 3R 12905977 12905996 ATTTGTTTGTATCGGCGTCG 59 12906071 12908397 GTTGCACGATCTCTTGTAGC 59 NA InUTR Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 1 2 2 94 3R 12006910 12010690 TAATTGCGCTCGTTTGCAG 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 CG3303 FBgn0038381 FBtr0083200 2 1 1 81 3R 11735001 11735079 TGGTACACAAGGATATTGTGAG 58 11735121 11735139 CTGGAGTAGGGAGTGAACC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 2 7 7 88 3R 10634008 10634095 CCTACGTTAAGGTGTATCTACTG 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 CG31517 FBgn0047199 FBtr0082864 2 1 1 144 3R 9774642 9774660 CCATCAGAAATCGCTGGAC 58 9774851 9774870 GCATCTTTGGTCATCTCGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GstD2 FBgn0010038 FBtr0082569 2 1 1 60 3R 8198214 8198235 GTTCGAAGTTAGTGAGTTCGAC 59 8198256 8198274 ATTGTCGTACCACCTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 2 3 3 102 3R 7792838 7792919 CAGATGCAATCCCTGAATGC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 CG14709 FBgn0025701 FBtr0302027 3 1 1 80 3R 7399516 7399536 CTTCATGGTCTTCCTATGCCT 59 7399578 7399663 TTCTTGTCCACCCAGTACG 59 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196,FBtr0273197,FBtr0273195 3 3 3 84 3R 7203836 7203854 TCAAGATGTACTTCCCGGA 57 7203900 7217259 TAGAATTCTCGGAAGTTCGAG 57 NA Drosophila melanogaster 61 CG33191 FBgn0053191 FBtr0081941 2 1 1 60 3R 4604714 4604732 TTGAAGAACCGTTGGTGGA 59 4604672 4604693 GCATAGATTATCAAGTGCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 3 2 2 87 3R 3745514 3745592 TGTCAGGTGAATATGCCGA 58 3745445 3745463 ACCAGCTGATCGATCTGTG 59 NA Drosophila melanogaster 61 CG10050 FBgn0037492 FBtr0081577 3 1 1 80 3R 3075668 3075748 CGAGAAATGCAAACGACCC 59 3075792 3075810 ACAATCTGTGAGGACACCG 59 NA Nonspecific Drosophila melanogaster 61 CG14606 FBgn0037485 FBtr0081603 2 1 1 80 3R 3040800 3040818 CCTGCATTGCTTCACTAGG 58 3040643 3040756 CAATGGAGCGGATCTTAGC 58 NA Drosophila melanogaster 61 CG14610 FBgn0037477 FBtr0081609 1 1 1 60 3R 2969555 2969573 GAATGTCTCAGTGAGGTGG 57 2969513 2969533 GGGTCTCTGTGATAGATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1077 FBgn0037405 FBtr0078587 1 1 1 80 3R 1993435 1993610 ATGAATGGCCCTCTATATGAC 57 1993652 1993670 TGGCTGATATCTTGAGCTG 57 NA Drosophila melanogaster 61 Sym FBgn0037371 FBtr0078723 3 1 1 82 3R 1567432 1567514 CGTAGAGCAAGTTTGTAAAGTG 58 1567371 1567389 CCGAGTTATCCCTAAGCAG 57 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 3 2 2 67 3R 214103 214188 ACTTCCTAAATGAGTCCACC 57 214218 214236 CAGCTCAAGGCTTATGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 tRNA:E4:62Ad FBgn0011854 FBtr0072690 1 1 1 60 3L 1401448 1401469 TGTCTAGTGGTTAGGATATCCG 58 1401490 1401508 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111147 3 1 3 111 3L 24530401 24530504 TAGGAGTAACGGCGTTACTG 59 24530576 24530596 CGACGGATCAATGTTTGACTC 59 NA InUTR Drosophila melanogaster 61 fln FBgn0005633 FBtr0074910 2 1 1 94 3L 19983179 19983259 CGGAATATCAGTGGCAGTG 58 19983103 19983124 TTATAAGTTCTTATCGAGGCCG 57 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917,FBtr0074916 3 2 2 80 3L 19914205 19914223 CCTGGACGAATTCCTGGAG 59 19914078 19914162 TGGTAGAGTCTGTTGTGACC 59 NA Drosophila melanogaster 61 Chd3 FBgn0023395 FBtr0074998 1 1 1 60 3L 19441008 19441027 TCTAAACCAGGCTATCGCTC 59 19441047 19441068 TCTTTGACGTCCCTTATTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3819 FBgn0036833 FBtr0075048 3 1 1 126 3L 18915150 18915168 TTCAGTGGCCTCTTCTTGG 59 18914785 18915062 TAATTGAACAACCAGCTGCTC 59 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 2 4 4 80 3L 18823421 18823439 TTGTGATGTACTTCACCCG 57 18823041 18823379 TAGAGTTACGAATGTCCTTGG 57 NA Drosophila melanogaster 61 CG42393 FBgn0259739 FBtr0300044 2 1 1 89 3L 18036132 18036153 CATCCTTTACTCGATGGATGTG 59 18036203 18036296 CCCTTTGAGTTCAGGTGGA 59 NA Drosophila melanogaster 61 CG7510 FBgn0036741 FBtr0075182 1 1 1 80 3L 17622322 17622395 GGCGCAAGTTATGGTATGG 59 17622437 17622457 CACAAATATGCTTGGTTTCGG 58 NA Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 1 2 2 81 3L 16652382 16652400 GTGTTCTACTACTGCGGCA 59 16644625 16652337 GCAATTGGAATCTAGGCCG 59 NA Drosophila melanogaster 61 CG15715 FBgn0036538 FBtr0075536 1 1 1 86 3L 15829939 15829957 AAGCAACAAGGACACAGTG 58 15829340 15829889 CATTTGCGACTTGCAAACG 59 NA Nonspecific Drosophila melanogaster 61 obst-G FBgn0036228 FBtr0076066 2 1 1 60 3L 11946338 11946359 TACTTCAAGAAAGTACTCTGGC 57 11946244 11946263 CATAAGGACGTCTTGAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 3 2 2 62 3L 11641278 11641355 AGAAGACCTGCGAAGTTCC 59 11641234 11641253 ATCTCGTGCTTCAATGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 3 2 2 103 3L 11143173 11143247 AAATGTGTTGTGGCAAGAC 57 11143088 11143106 CTTGTTGGAGGACAAAGGT 57 NA Drosophila melanogaster 61 CG34001 FBgn0054001 FBtr0300947 2 1 1 101 3L 10627291 10627380 GCCAACCTATTCTCATCATTGG 59 10627442 10627460 CTCCCTCATTGGTCTTGGA 58 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323,FBtr0113322,FBtr0113324,FBtr0076460,FBtr0076459 2 5 5 187 3L 9429058 9429076 TACGAATGTGAGGTGTCCG 59 9429334 9429353 TCTTCCGGACATTTGTAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 1 1 1 140 3L 9129757 9129869 GAAAGGAACTGCTCCAGGA 59 9129635 9129656 GGGCATTCGTATAATACTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Jon66Ci FBgn0035886 FBtr0076608 3 1 1 71 3L 8384852 8384870 CATCATCTCCAACGAGTGG 58 8384905 8384923 CCGAAGTAGACAGTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uba2 FBgn0029113 FBtr0076734 3 1 1 95 3L 8120385 8120461 GTGTAACATCTACTGATTATGGCG 59 8120313 8120333 GATTTACATGATTCCTGGCGG 59 NA Drosophila melanogaster 61 vvl FBgn0086680 FBtr0300260 3 1 2 121 3L 6785085 6785103 ATCCGCATCACGATATGCA 59 6785188 6785284 CTGCTGGCTTAGATGATGC 58 NA DesignRelaxed Drosophila melanogaster 61 Cpr65Ax1 FBgn0086900 FBtr0112465 3 1 1 87 3L 6140849 6140937 TCATATGCAGTTGAAACCAGC 59 6140782 6140800 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG32250 FBgn0052250 FBtr0073287 1 1 1 76 3L 4319231 4319249 ACTGGATACAGTGCGTTCC 59 4320167 4320185 TCTCCTTGATCACTTGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG32260 FBgn0052260 FBtr0073214 3 1 1 80 3L 4143690 4143710 ATCGGTTCGGATATGATGGTC 59 4143751 4143983 TTGACAGGATTGAGGTCTCC 59 NA Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160,FBtr0073161 2 2 2 111 3L 3905503 3905524 GATTACCGTGTTGATATTGCTC 57 3905666 3905686 GAATGAGCTTGAATACCAGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 1 2 2 122 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237555 3237573 ACAGAACTCGAGCACTTCC 59 NA Drosophila melanogaster 61 CG32319 FBgn0052319 FBtr0072714 3 1 1 60 3L 1471768 1471786 CTTTCCGAACCGTACTCCA 59 1471726 1471747 ATAGATCTGGCCAATTGTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 1 2 2 80 3L 1035391 1035410 CAGGATCATTCGTGAATCGG 59 1035452 1035569 TACTGCCATCCCTTCATCAC 60 NA Drosophila melanogaster 61 5SrRNA:CR33411 FBgn0053411 FBtr0086403 1 1 1 60 2R 15632319 15632337 ATACATCGGTTCTCGTCCG 59 15632277 15632295 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 3 1 1 156 2R 10178006 10178025 AGGCTGAATCAGAGATACGG 59 10177833 10177887 TTTGCCTTTAGTTGGTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13563 FBgn0034966 FBtr0113117 1 1 1 84 2R 19943405 19943487 TCGAAGAGGAGCATCTTCAG 59 19943534 19943552 AGTCAACGGTGGAAGTAGC 59 NA Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112,FBtr0072114 3 2 2 205 2R 19435018 19435037 TACTTTCTCATCTCGGCCTG 59 19433334 19433352 TGGAAGCTGTGTATCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13559 FBgn0034870 FBtr0072057 2 1 1 60 2R 19390960 19390982 TACCTCATCACTCATGATCTGTC 59 19391002 19391020 GATCTTTGTGGTCGTCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30417 FBgn0050417 FBtr0072041 3 1 1 60 2R 19214373 19214391 AGCTGGAGTTCGACATCTG 59 19214331 19214349 AAATAATCACGGATGCCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112520 3 1 2 129 2R 18218159 18218180 CAGAAATAGGATAGGAAAGGCC 58 18218269 18219691 TCTTGTAGTTCAAAGCAGCC 58 NA InUTR Drosophila melanogaster 61 CG18735 FBgn0042098 FBtr0071744 3 1 1 60 2R 17686279 17686299 GTAAATGGCTTCTACCATCGT 58 17686239 17686260 TATCCTGACGATTATGCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15658 FBgn0034602 FBtr0071583 3 1 1 115 2R 17085563 17085581 AAACTAGCTCGTTTCAGCG 58 17085660 17085743 ATCAATTTCCTGGAGCGAG 57 NA Drosophila melanogaster 61 CG34199 FBgn0085228 FBtr0112392 1 1 1 80 2R 16175136 16175213 TGACAAAGTTGCTTCTACTGC 59 16175255 16175273 AAGGTGCTATACGTCCACC 59 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0086699 1 1 2 105 2R 14415258 14415276 AACAGGTGACAGAATGCTG 58 14420216 14420234 AATGGAGAGGAAGCGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086688,FBtr0086684,FBtr0086687,FBtr0086689,FBtr0086686 1 5 8 191 2R 14309051 14311643 GGAGGACCATAATACAGCCA 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 1 2 2 80 2R 13679579 13679598 GATATCCGCTCTTTGCTTCC 58 13679638 13679722 TTTGCAGCAGGTCATTATAGAC 58 NA Drosophila melanogaster 61 CG6796 FBgn0034177 FBtr0087057 3 1 1 99 2R 12889614 12889693 TTTGGCCATACAGGGATGG 59 12889756 12889774 GACCACCTGGAACCTACTG 59 NA Drosophila melanogaster 61 CG30321 FBgn0050321 FBtr0087286 1 1 1 70 2R 11680952 11680971 CGCATAGCACAGGATAACAC 59 11681004 11681022 TCCAGTTTCAGGTCCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 3 2 2 81 2R 11400205 11400223 GCTGGACTACTATGTTCGC 58 11400268 11401266 ACGAATCAAACCCAATCGG 58 NA Drosophila melanogaster 61 CG10153 FBgn0033962 FBtr0087470 1 1 1 91 2R 10645043 10645118 CAAACAAGACTCCACGATCTG 59 10644972 10644990 TTTGTTTCTCGCTTGGAGC 59 NA Drosophila melanogaster 61 conv FBgn0261269 FBtr0087540 1 1 1 80 2R 10160895 10160914 GAAGTGCCTTTGGTAAGCTG 59 10160955 10161044 AAGCTCGCTTGCTTATATCCT 59 NA Drosophila melanogaster 61 beta4GalNAcTA FBgn0027538 FBtr0087539 1 1 1 80 2R 10147581 10147601 ATCTTTACAACTGTCCACGTC 58 10147642 10147718 TTGATCGATAAGGCAACCTG 58 NA Drosophila melanogaster 61 CG13337 FBgn0033863 FBtr0087626 2 1 1 60 2R 9553228 9553249 AGATGCAAGGAATCAGAAACTC 58 9553265 9553288 CTTCTAAGAGCTTTGTGGTATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Psc FBgn0005624 FBtr0087798 2 1 1 86 2R 8862096 8864836 AGTGTCTGCACTCCTTCTG 59 8862028 8862046 TGTTGATGACCATCTCGCA 59 NA Drosophila melanogaster 61 CG8646 FBgn0033763 FBtr0301237 3 1 1 88 2R 8545051 8545069 CGTTACTATGTGGCACCCA 59 8545119 8545195 ACTGTATGTTGCATTCCTGTG 59 NA Drosophila melanogaster 61 CG30334 FBgn0050334 FBtr0087949 3 1 1 92 2R 8328754 8328773 AACGAAGCAATTGTTGGAGG 59 8328631 8328701 CATGTTAGCTGGATTCTGGAC 58 NA InUTR Drosophila melanogaster 61 CG30039 FBgn0050039 FBtr0088023 1 1 1 80 2R 7939156 7939177 CACACGTTCTAACGATAAGTCG 59 7939045 7939115 TTCTACACTTGGAAGCGGA 58 NA InUTR Drosophila melanogaster 61 Buffy FBgn0040491 FBtr0088077 2 1 1 104 2R 7575232 7575326 CATTTCTCAGGGTCGTTGC 59 7575394 7575412 AGTATGCTACGTATGCGCT 59 NA Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 2 2 2 80 2R 5709942 5710025 CGCAGTACATCTTTAGCAAGG 59 5709882 5709903 GAAGTTCGAACTCAGATTCCAG 59 NA Drosophila melanogaster 61 dap FBgn0010316 FBtr0088469 2 1 1 131 2R 5600953 5600977 GGATAATGAATCTTGTTACGACTCC 59 5601064 5602431 CGCTCCTTCATGAATTCTGTG 59 NA Drosophila melanogaster 61 CG8701 FBgn0033287 FBtr0088740 2 1 1 62 2R 4259408 4259426 GATGTTCCAAGCTCCTGTG 58 4259452 4259470 CTTCCGTGGATTTCCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nec FBgn0002930 FBtr0089052 3 1 1 106 2R 3044372 3044390 CAAGTTGATGGATCAGCCG 59 3044218 3044302 CGAACTTGGCATAGGAAGC 59 NA Drosophila melanogaster 61 CG34215 FBgn0085244 FBtr0112408 3 1 1 83 2R 2718991 2719063 ATCCAATCATGTGGTGCCT 59 2718926 2718944 GCAATCAGGGTAATCTGCG 59 NA Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111291 1 1 2 102 2R 560475 560493 ATCTTTGTAACAGCAGCGA 57 560554 560628 CTTCTGGTATCACTGATAAGAGAC 58 NA Drosophila melanogaster 61 CR42546 FBgn0260719 FBtr0301172 3 1 1 69 2L 21589852 21589871 TAAACTTCAACAGCAGGCTG 58 21589802 21589820 CTTGTTCGTTGTCTGGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33834 FBgn0053834 FBtr0091838 1 1 1 60 2L 21486661 21486679 GATTCTGCAGTTGCAACGT 59 21486703 21486721 TCTTCTCAACTGTCGCTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0081476,FBtr0110895 3 2 2 80 2L 21207407 21207481 CTATGAGACTGACAAGGAGCT 59 21207521 21207541 TTTACTGTGGTTGGATTGCTG 59 NA Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 3 2 2 130 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781807 20781825 GGTACTTATCCTTGGTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31683 FBgn0051683 FBtr0081365 2 1 1 60 2L 20449310 20449396 TCGCCAGTGATATTCGTACC 59 20449269 20449288 GCTTATTTAGCCGAGCATCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13965 FBgn0032834 FBtr0081308 3 1 1 84 2L 19962205 19962285 AACTGAAGCTGATTGGAATCG 59 19962141 19962159 GACGCTGGAGATGATTCAG 58 NA Drosophila melanogaster 61 CG13084 FBgn0032788 FBtr0081240 3 1 1 64 2L 19485869 19485887 GTGGAGCATCAAGGAGGAG 59 19485974 19485992 CATAGGCGGTAGCTTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34167 FBgn0085196 FBtr0112358 3 1 1 62 2L 16003102 16003120 TTTGTGCCGAACAAATGCA 59 16003058 16003076 GTATTAGTACAGCGGGCCA 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG31827 FBgn0051827 FBtr0080759 3 1 1 91 2L 15705245 15705266 GCTTGGACACTAATAGTAGCAC 59 15705317 15705436 CCATATCCGCACTTTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 1 2 2 82 2L 13351382 13351466 CATTATCGGGTTTGTGAATTCG 58 13351321 13351340 TTCACATACTTTGTGGTCGT 57 NA Drosophila melanogaster 61 CG31715 FBgn0051715 FBtr0079996 3 1 1 131 2L 10341918 10342158 GGAGCAGACATAAATAGAAAGGAC 59 10342303 10342321 GCCATCTGGAGTAGAACCA 58 NA Drosophila melanogaster 61 CG4747 FBgn0043456 FBtr0079930 2 1 1 80 2L 10006577 10006918 GCCAAGGATCTCGTATTTGG 58 10006959 10006979 TGTAGACATTTCAACGTAGGC 58 NA Drosophila melanogaster 61 sop FBgn0004867 FBtr0079905 2 1 1 60 2L 9896942 9896963 CAAGATCAAGTCTTTGGAGGAG 58 9896903 9896923 GATCTCGAACTCTTTGATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17906 FBgn0032086 FBtr0079762 3 1 1 174 2L 8994722 8994741 TATTTACCTGCACTTACGGG 57 8995015 8995098 TCTGGCATGGTTAATGATAGAG 57 NA Drosophila melanogaster 61 CG7781 FBgn0032021 FBtr0079609 2 1 1 60 2L 8324984 8325005 CATCTATGTGATTAGTGCGCTG 59 8322934 8324965 CTTGATGGCATATCCTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 1 2 2 106 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026628 8026646 CTTGGACGTGAATTTGGCT 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0114488,FBtr0079312,FBtr0079314 3 5 6 95 2L 6701751 6701769 ATCACTCTCACTCGATCCA 57 6700488 6700562 CGACGAGGTCTAATGTGTC 57 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 3 2 2 97 2L 6291178 6291255 TGGCAAAGGTTACGAATGG 58 6291313 6291334 CACTTAAATTCCGAACTGTCTC 57 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 1 2 2 86 2L 6097244 6097319 CCCAAAGACGTACAATCCC 58 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 Vm26Aa FBgn0003979 FBtr0079239 2 1 1 89 2L 5960079 5960097 CTCCGTAAGTCTGCCTACG 59 5960008 5960027 GCTGAACAGGTAGTTCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cl FBgn0000318 FBtr0079095 3 1 1 225 2L 5520413 5520431 CACAACGTCAAGGGATACG 58 5520693 5521146 AATCCTTCCAGTATGCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG42463 FBgn0259953 FBtr0302203 3 1 1 124 2L 3668982 3669061 AAAGGAACCCATATGCAGGT 59 3668877 3668895 TTACCTTACAGGCCATCGC 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077606,FBtr0077605 2 3 3 89 2L 3292104 3292186 GTCCAGAGATATGTTTGCTGTC 59 3292036 3292055 CCACCTATCTGCCAGTAGAC 59 NA Drosophila melanogaster 61 CG9870 FBgn0031422 FBtr0077768 1 1 1 100 2L 2383958 2383977 CTTCATACTGGGATTCACGA 57 2384037 2384111 GAAGGAATAGCAAACCTATTGC 57 NA Drosophila melanogaster 61 CG15385 FBgn0031397 FBtr0077845 2 1 1 80 2L 2211710 2211783 TTGGTCAACAGGTATCGCA 59 2211648 2211668 CACCTTGTTCCAGTACATGTG 59 NA Drosophila melanogaster 61 CG17648 FBgn0031364 FBtr0077887 3 1 1 62 2L 1752651 1752670 ATAAGCAGGAGTACGCTCTG 59 1752695 1752713 GGGTCATGATGTCCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pi3K21B FBgn0020622 FBtr0078132 3 1 1 104 2L 299904 302029 GGACAAGTACATTGAGCGC 59 302095 302115 ACTGTCTCATAAAGTTGCTGC 59 NA Drosophila melanogaster 61 CG11601 FBgn0031244 FBtr0078137 3 1 1 147 2L 282767 282785 ATCGGTGAGGGACTATGTG 58 282490 282656 CACGTGATTCAACCAGCTG 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 1 4 4 80 2L 124010 124094 GGGATTGGACTCTTATGTATCTG 58 123952 123972 CAATGTCATAGTAGAGTGCCC 58 NA Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 1 2 2 80 2L 357476 357494 ACCTACCTCGTGTTCTACC 58 357183 357433 CTTCCAGTAATCTTCCGCAG 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 1 2 3 80 2L 1179515 1179867 AGTTAACCCAGGGAGTCCT 59 1179911 1179929 AAGTCCAGTCTGAGATGCG 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 3 3 6 125 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500035 1500123 GGATATGTTGACTTGAGTGGC 59 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 2 3 3 80 2L 2040347 2040429 GTTCACAGTGCTGATTACACC 59 2040471 2040489 AGCATGGCATCTTTACGGA 59 NA Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 2 2 2 125 2L 2158565 2158583 CTCAAGCTGGAGAATGGCT 59 2158396 2158478 GCGAATGAGTGGATAACAGTC 59 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 2 1 1 60 2L 2287697 2287715 GCTGAATCCCAACGATAGG 58 2287593 2287612 ATAGTTAAGCCAGGCATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 1 4 4 98 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492328 2492346 ACGCGATCGTAGATAAGGA 58 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 3 4 4 246 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492123 2492141 GTCCAAATTCTCGTCGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 1 1 1 70 2L 2869356 2869374 GAACACAGGCATCAATGGA 58 2869236 2869254 CAGCAGCATTCACAAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 2 4 4 223 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882297 2882315 ATTATCCGCGAAGGAGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 2 3 7 117 2L 2961988 2962284 ATATCACTGATGAACATGCTGC 59 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 2 3 3 91 2L 3017840 3017862 CGGATTATTTATACCACCTGGAC 58 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 3 1 1 120 2L 3388408 3388430 CAAGTACTCCTGCTGAATAAGAC 59 3388248 3388269 CGATATTTAACTCCGCAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 1 2 2 93 2L 3716219 3716241 GGATACCATCAAGCTGTTAAAGG 59 3716294 3716397 CACACTTTGCTTGACCTCC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 2 8 9 85 2L 3879058 3884044 AGTTCGAAGGTCAAATGCT 57 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 2 5 6 91 2L 4307446 4307566 TACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 2 11 11 97 2L 4994704 4994794 CCCTTTAAGGATTACCTGGAG 57 4994627 4994648 GAGATGAAGCCATTGATATGTG 57 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 1 3 3 103 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034971 5035072 CAATAAGACCTTGACGTCCG 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 2 5 8 93 2L 5069211 5070107 GCGCGTAAGACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 1 2 2 92 2L 5331186 5331270 GTATCCAGATAACAAGCTGCTG 59 5331115 5331133 ACCAGGATGGAATTGGAGC 59 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0300012 3 1 3 136 2L 5360392 5362002 CTACTTCAGTGACGGACCC 59 5362102 5362120 ATTTGAAGAGCACCTCGGT 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 2 2 4 80 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718593 5718665 AGCATAGTTCTGTATGCGC 58 NA Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 2 2 2 80 2L 6725248 6725785 AATAATACCAGGCTTCTCCTCG 59 6725826 6725844 CTTCACAACGGTCATACGC 59 NA Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 1 2 2 81 2L 6862437 6862456 GTGGCTACCTAATATCGCTG 58 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 3 5 5 133 2L 6924281 6924301 GTTATCATGTACGACCAGGAG 58 6924396 6924698 TTCTTGATTTCGACCTGCT 57 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079359 2 1 5 162 2L 6963548 6963646 TTGTTAGAGAAACACTTGCCG 59 6963406 6963424 CGCCGAGATTAACAGTCCT 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511 1 1 5 85 2L 7697150 7698737 CCTTACAACACTGAAAGACGA 58 7697085 7697103 GATCCAGCAACTGTTACGC 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0079492 2 1 3 129 2L 7805161 7805179 CGTCAGGATGACACAAACG 59 7804909 7805068 CTGTTCGCTGCTATTGCTG 59 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079536 1 1 4 121 2L 8031301 8032072 TGTGAAAGGATATAGCGTAGG 57 8032155 8032173 CTCTCCTGATCCTCTCCTG 58 NA InUTR Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 1 2 3 129 2L 8482614 8482632 GGGACTATTACCGCGATCC 59 8482724 8483142 GATGAAGATGCATGGATCGG 59 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 3 3 3 83 2L 8564222 8564243 TACTTACAGTCCTCGTGATTGG 59 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0112846 3 1 4 144 2L 8690242 8698858 CACATTATGGAATCGGAGAGC 59 8690118 8690136 TCTGGTTGCTACTGTTGCT 59 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 3 3 3 81 2L 8928732 8928996 TAAAGCGAGCAGATCTTCC 57 8929040 8929059 GGAGTTGCCTTAGGTTTCTC 58 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 2 3 4 84 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519739 TAGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079912,FBtr0079915 1 2 6 80 2L 9815906 9825310 CGTGGTTAAATTTGGAGTGGA 58 9815846 9815866 TGATTCGTAGATCCTTGACCC 59 NA Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 3 1 1 161 2L 9937711 9937729 GACAGTCAGTACTCCGAGC 59 9937421 9937439 GGCTTCCTCTTCGATTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 3 2 3 183 2L 10322826 10323682 AATGATAAGGATCCCTACCGG 58 10323895 10323913 GATCATCGGTTTGCAGGTG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 1 5 6 80 2L 10399673 10399772 ACAGGTATTGTAAATGTCGCG 59 10399813 10399832 ACTTGAACCATTTGTACCCG 58 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 2 1 1 87 2L 10704073 10704092 GCATAATGAAGACAGCTGTG 57 10704198 10704216 ACTAGAGATTGATCGGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 3 3 3 175 2L 10774660 10774752 CGACAATTGTCCAATTCTCG 57 10774504 10774524 CTTTGTTGTCATCGGTTATGC 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 2 5 5 80 2L 10993661 10993749 AGACCGGAATGAGTATGTGG 59 10993790 10993810 TCATCCTCGGCTATGATAAGG 59 NA Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 3 3 3 154 2L 11524691 11524710 TGGAGCCACCTATTATCCAC 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262 1 1 4 136 2L 11797737 11798679 ACTTCATCTGCAAAGTTCCC 58 11797620 11797638 GAGCGTAGAGGTAACCAGG 59 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572 3 1 3 105 2L 11987772 11987790 CAAGAAGCACAAGGAGCAC 59 11987502 11987706 AAAGGAGAAACTATCCGAGTCC 59 NA Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 2 2 2 113 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051539 12051558 CACATTATCGGCCATCTTGC 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080344,FBtr0080346,FBtr0300567 2 4 5 80 2L 12278911 12282525 CTAAATGGGATGTACCATCCC 58 12298571 12298590 CATACCCACAAAGAGTTTGC 57 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642 2 1 2 118 2L 12614103 12614121 TAAGGTCCTGGAACTGACC 58 12614200 12622983 GACTGATATCATTTGGGTCCTG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 2 2 17 143 2L 12736123 12736141 TTATGCATTGTCCCTCCGA 58 12736248 12737968 TAGCCAGAACCTGAAATGC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 1 3 17 87 2L 12731059 12737971 TCTTTATGGTTCTGGCTACCA 58 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 2 4 4 83 2L 13209771 13209789 GTGAACTCCTACAAGGGCA 59 13209836 13209919 ATTGACAAACTTGCAGGCC 59 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440 2 1 4 102 2L 13208770 13209503 GAAAGAAGATTCGGCAGCC 59 13209569 13209587 GGGATTCGGTGACTTTCCA 59 NA Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 2 1 1 255 2L 13457651 13457669 CATCGGATGATGTTGCCTG 59 13459936 13459954 GGATCAGAGCCTCGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 1 2 2 70 2L 13668755 13668773 ATATTCCGTCCGGAACTGG 59 13668864 13668883 ACATAGTCCTCCACAGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 1 2 2 80 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164181 14164202 TCTCCAGTGTATCAGAATCCAG 59 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636 3 1 3 80 2L 14389443 14391081 GGTGTATATGTGAAAGCCACC 59 14389383 14389404 TAGTGCCTCCAATGATAAATGG 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 3 2 3 81 2L 14846481 14846797 TACTTTGTTAAGGAAGTGCTGC 59 14846421 14846439 GTCCAATGACCAACTCCCA 59 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 2 4 4 82 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065385 15065404 CATCAATAGCCTCCTTGACC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 3 4 4 80 2L 15266640 15266658 GATCGTAAGCACGAGATCG 58 15266509 15266598 TGATACTAGCAAGTTGTGAGC 58 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878 3 1 7 82 2L 16475402 16481533 ACCAGAAAGTTCCAGACCG 59 16475338 16475357 GATGCTGCGATAGATGAGTG 58 NA Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 1 2 2 174 2L 16744378 16744700 GCGTACAGTAATGCTACCA 57 16744836 16744856 GTGGATGCATAATCTTTGTGG 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 2 5 5 150 2L 18320723 18383413 CTTAACAGATGCACTCACCT 57 18383526 18383544 GTTGAGTACCTTCTGCTCG 58 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 3 3 3 107 2L 18963251 18963269 GGAATCCGTTCGAAGAGGA 59 18963107 18963181 CTGTGATGCTTCCTTGACTG 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081232,FBtr0081230,FBtr0081229 3 4 4 126 2L 19183415 19183433 TTAGGATACCCTGAACGCT 57 19183254 19183272 GTACACAGCAGAGTTCCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0081318 3 1 3 84 2L 19779327 19779411 AAGACCTGTGCACAGTACC 59 19779261 19779279 ATGCAGCTTGATCTGACCA 59 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 3 2 3 82 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779317 19779404 CACCGTTGTTGGTATGCAC 59 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0081304 3 1 2 105 2L 19970592 19970610 CACACTCAGTGTCAAGGTC 58 19970226 19970523 GTTGTAGTTGGTGACCTGG 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 1 6 9 92 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882384 20882402 GTATGTTCTTCACGTCGCG 59 NA Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 3 1 1 61 2L 21164665 21164683 GGCCTTTCTCTGCATTCTG 58 21164767 21164785 GAACGTGATTCAGCATGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081509 2 1 4 86 2L 21292855 21292879 CATGAGTAACCGTGTTACTATTCAG 59 21297327 21297346 ATTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 3 2 6 194 2L 22737571 22741956 TATACGAGATTGAGACGGCA 58 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 2 2 3 96 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648242 20648434 GGGTTTCAGCATTATAAGTGTG 57 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 2 1 1 64 2R 674645 674663 GGAGGAGATCGAAACCCAC 59 674537 674555 GCGCTGAATAGTCTACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 3 2 4 92 2R 1328568 1334051 CGATGAAGTTCAACAACCCA 58 1334106 1334124 GAAGAATCAGGAGAACGGC 58 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 3 4 4 86 2R 1925633 1925653 ATTGAGATGGGCTTCAAACTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 1 2 2 85 2R 1962622 1962640 AAATAAGAGCGTCAACGCA 58 1962492 1962573 CATTATCGCTGTCACCCAC 58 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 1 3 3 135 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 1 2 2 60 2R 2555723 2555744 TCGGACAAATCAAAGGAATCAC 59 2555817 2555835 TGTACAGATGACAGGGTCG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301421 2 1 7 131 2R 2625569 2625587 AGGAGTGCTCGATTTCCTC 59 2613523 2625477 TCTTCTTTGTAGAACAGAACGG 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0086136,FBtr0301420 2 3 7 80 2R 2620750 2625473 TCTGTTCTACGACAAAGACCA 59 2620690 2620708 TTCTGATCGCACTCATCGT 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0300285 1 1 5 90 2R 2640927 2640945 GATCTCCATCTGATGCACC 57 2640999 2642215 TGGATACTGCAGTTGAAGC 57 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131 1 1 5 118 2R 2641936 2642220 GAAGCCCATATCCAAGGTG 58 2642302 2642320 TGTTGACCGAATTGCTCAC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 3 5 11 143 2R 2764835 2764853 GATGTTCTCCGATCAGGCT 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 1 3 6 83 2R 2814317 2816022 ACTTTGACGACTATGCCAC 57 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111067 3 1 59 94 2R 3249289 3249308 ATACAAGAGCTACCAGTGCC 59 3240519 3249232 AGATGGGCTCTGTGATGAC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111097 1 1 59 80 2R 3219878 3233785 TAGCTGTCAATGTACCTCCC 58 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082,FBtr0111057,FBtr0111059,FBtr0111083 1 4 59 88 2R 3219876 3230845 AAGTCAACGTACCTCCCAG 59 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111061 1 1 59 80 2R 3244150 3249236 ATTGGTCATCACAGAACCTG 57 3244089 3244109 GCTTGTCTGATATTCACACCA 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 1 8 8 83 2R 3287431 3287449 ATCTACGACAAGGAGACGG 58 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 3 5 8 109 2R 3355323 3356624 CACTATGCCGTTGATGTGC 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 3 2 2 119 2R 3715846 3715926 TCTACCAAGTGGAGTACGC 58 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 2 2 2 60 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720240 3720258 GAAAGTGTGCGTAGTCCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 3 2 2 84 2R 3991723 3991742 AAATTCACAAACTCGTTGCG 58 3991600 3991678 CGTATTTAGCAATAAGCTCGG 57 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 3 9 9 80 2R 4568219 4568302 CATGGACTACCGTGATATGAC 58 4568343 4568362 TCTTCCCAGTTGACTAGACG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 1 9 9 80 2R 4566363 4566440 AGTTGCTCATTGCATCACC 58 4566484 4566502 AGCAGCGTCTTAAACTTGG 58 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 3 4 4 120 2R 4642429 4644854 CGAACCAAAGACTATCGATATCTC 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 3 4 4 120 2R 4642429 4644854 CGAACCAAAGACTATCGATATCTC 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 1 4 5 94 2R 4788974 4788992 TTAGCCCGTAGAGTTCGAG 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 1 3 3 91 2R 4799446 4799529 AGAAGAATGCTCCTGTTATCCT 59 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512 2 1 3 93 2R 5074632 5075636 ACAGACTTGGAGGTTTGAGG 59 5074558 5074576 CAGAAAGGTGACCATGCAG 58 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 1 2 4 174 2R 5118142 5119261 ATTTCAGTGAATGTGGGATGG 58 5117988 5118006 CCTCCGAGTAGTTGGTCAG 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 1 3 3 80 2R 5323910 5323928 TCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 1 1 1 60 2R 5341141 5341159 TACTCGTGTCCCTTCAAGG 58 5341048 5341070 CCAACTCGAAGTCTTTACATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0088492 1 1 2 80 2R 5708987 5709006 TTCAGACAATCCTAAGGCTC 57 5708869 5708947 CAATTGACACATGAATCTCCAG 57 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 3 2 4 80 2R 5782125 5782146 CCTAAGCGATGAAAGTTGTCTG 59 5782186 5782260 ATTGGTCTGTTCTCTTCGGT 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088447 3 2 5 102 2R 5805514 5805532 ATCTTAGCGTACTGAGCCA 58 5805024 5805448 TACTTATCGTGCCCTGGAG 58 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088445 3 2 5 120 2R 5807023 5807041 GATCTTACGGCGACAACCT 59 5806555 5806943 CCCGATGGATAAATTATCAGGGA 60 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 1 4 4 101 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880558 5880576 GTAAAGATCATCGTCGCCG 58 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993595 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438 2 1 4 90 2R 6120801 6120900 CAAGTGAAAGTGCCCAGAG 58 6120729 6120747 CGATATACGTTGGACCACC 57 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088363 3 2 4 153 2R 6138088 6138398 TCATCATCGTTCTGGTGTC 57 6137953 6137971 GTACACGTACACAAACGTG 57 NA InUTR Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 2 16 17 81 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193032 6193050 AAGTTGTATTTGGCACGGG 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 3 3 17 104 2R 6180370 6180858 GATCAGAACATTCGAACGCTC 59 6180924 6180942 ACTTCATTGGGCCTGTAGG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 1 3 17 99 2R 6180856 6180874 CTCTTCGTCCAACTCGGAG 59 6180932 6181137 GACTTTGTAGATGACTTCATTGGG 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 2 2 3 126 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322251 6322272 CTCTTCAGTCATTAGGTTCTCC 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 2 3 3 80 2R 6338169 6338261 GGAAACTCTACGAATGCGA 57 6338107 6338126 ACGTGGTAACCATTGATGAC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 1 3 3 91 2R 6527407 6527426 CAATCATACAAGTTGTGCGT 57 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 1 3 3 131 2R 7108118 7108443 ACACTATCAGCATCGTTGAG 57 7108536 7108555 GGTTCAGGCTCATCTTATCC 57 NA Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 2 2 2 91 2R 7294171 7294189 GAGGAGCTCTTAGTGGAGC 59 7294243 7294317 ACCACAGTTCTCATGAAGCA 59 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 1 2 2 175 2R 7300282 7300300 TTGATCCCTCCCTGAACTG 58 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 2 2 2 104 2R 7540580 7565722 TTCAAGTTATGGATTCCTGCC 58 7540496 7540514 GAAAGGAGTGGTTGCACTC 58 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074 2 1 2 151 2R 7559787 7560224 TTTGTACCTTCTCCCAGGTC 59 7560338 7560558 CCAAGAACCAGCATCTTGG 58 NA Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 3 2 2 90 2R 7564736 7564754 CTTTCCACGATCATCGTGG 58 7564807 7564882 ACAGAAGAATCTTTCTGCCC 57 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088043 2 1 2 101 2R 7876824 7876899 CGCTTTCTGATATACTCAACGA 58 7876961 7876979 CGGATCGTACTCCATCCAG 59 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0087917,FBtr0087916 3 2 3 89 2R 8276584 8276771 GATCACTCTTACCTGACTGAG 57 8276821 8276840 ATAGAATCCCTTGGCATGTG 57 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087947 3 1 2 113 2R 8378198 8378839 TACGAAAGCCTACGCTATCTC 59 8378105 8378123 TTGGTTCCAGTAGAGCACC 59 NA Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 2 2 2 80 2R 8516768 8516843 AAAGATCAAAGAGGAACTGGC 58 8516708 8516728 CCAGAAGAGATCATGCTTTCG 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018 3 1 8 175 2R 8560835 8561719 GATAATCAGCCATCGCGAG 58 8560678 8560699 CTTTCTTCAAGTTGTCCATCAG 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0301490 1 1 8 162 2R 8559168 8559186 ATGAGGCAGAGAACTTCGG 59 8558976 8559044 GAACCTGGACTTGAACTTGAG 58 NA Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 1 2 2 80 2R 9094784 9094802 ACCAAATGGACAGATCCCT 58 9094844 9094920 CCTTGGTATTACGATCTTCGG 58 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0087669 1 1 2 102 2R 9394291 9397307 AAATTTGGATTCCCTAGACGAC 58 9397370 9397388 TTCGATTTCCATGTGCTGG 58 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 1 2 3 80 2R 9406088 9406109 ACTCTGCTTTATGTATGCTCCA 59 9405631 9406052 CCATAGATCAAAGACTTCTTCTCG 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 1 5 5 81 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 2 3 8 102 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065442 10065460 CTTTAGGTTGGGTGCTTCG 58 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 2 2 2 93 2R 10636930 10636949 CCATAATGTGGTAGGTCAGG 57 10637004 10637087 ATGACCAGCATTGTTGTAGG 58 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0112809,FBtr0087465,FBtr0112810 1 3 4 80 2R 10663088 10663109 AGGTGACGCTATCCTATAAGAG 58 10662961 10663047 GTTCGTTGAGAGCTGAGAC 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110999 3 1 6 114 2R 10836922 10837075 AACTAGCCTGCCTATTTCCC 59 10836456 10836474 TTGACGCGATACAACTTGC 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 1 5 5 80 2R 11211645 11211717 GCCTGATGCAATGAAACCC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 1 2 2 80 2R 11407475 11407494 TGCAATAATCTGAGCAACGA 58 11407358 11407433 GTTAACGCGATCGAAATCTG 57 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777 2 1 5 138 2R 11447099 11447118 ATATACCGCCGTATTTGGTG 58 11447219 11449329 ACATTACGATCATGTCGGC 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556 1 1 3 80 2R 11588665 11588685 TACGAGCTTGCAATTAGTTGC 59 11587509 11588626 AATTCTTGTTACTTCGGACAGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 1 8 13 82 2R 11835563 11835581 CTAACAAACCTCCGCTTGC 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 3 4 13 80 2R 11846819 11847310 CACCTCGTACTTCAGAGATCC 59 11846759 11846777 AACGAGATGTGAGTGGGTC 59 NA Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 1 2 2 80 2R 11912812 11912895 GAGTCCATCAGATTAGTTGCTC 58 11912753 11912772 CACTCGGATCTTTGAAGTCC 58 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0300575 2 1 3 81 2R 12001319 12001337 AGATTGACGATTGCCACTG 58 12001381 12001551 CCTCGGAATATTCATCGTCC 58 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 2 2 5 114 2R 12216143 12216163 ACACATAGATCGTCTCCAGTG 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 3 3 5 99 2R 12247645 12247753 CAAATGTTTGTCGAGAAGCAC 58 12247814 12247832 AGATCCTGGCAAGAAACGA 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626 3 1 6 148 2R 12901493 12903178 TTTATGTATTTGCGGCCGTC 59 12901364 12901383 GATATGGTGTGATTGTCGGG 58 NA Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 2 3 3 80 2R 12905300 12905583 ACATTGCCTTAACCAGAATCC 58 12905240 12905258 TTGTTCTCCATGCCATCGA 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0301482 3 1 7 148 2R 13163434 13163452 CTGCAATTGGAGGTCTGTC 58 13163561 13193505 CCATTGAAACTTACCTTGATGC 58 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 1 3 4 84 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 2 2 2 80 2R 13403018 13403094 ATGCGGTTTCTATCCTAAACAC 58 13403135 13403153 TGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 2 2 8 81 2R 13408429 13411602 CTCGAATCTAACCGGTCCT 58 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 1 3 8 82 2R 13408423 13410365 TCTGTGCGGTCCTAAACTC 59 13408359 13408378 AAACACAGTATTCAACGGCA 58 NA Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 3 1 1 89 2R 13934918 13934936 GTGCAGTGTGCTAATCCTC 58 13934783 13934801 AAATACTGGTCGAGGGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 2 2 2 89 2R 14182691 14182765 GAGGAAACGATGGTTGAGG 58 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 2 2 8 96 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312528 14313478 AACTCAACGCTTTAACGTTCTC 59 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 2 4 4 144 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646370 14646453 CGAAATTGCTTAAACCCTGCT 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633 3 1 2 172 2R 14697678 14698840 CTTTGAGGATGAAGACTCCG 58 14697459 14697480 TCTTCTCCGACCAATTATACTC 57 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 3 1 1 89 2R 14857641 14857661 CAGGGAGCAAATTATCTACGA 57 14857506 14857524 TCCAGCTTTGTACTGTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 2 4 5 95 2R 15024322 15024463 TCGACCAGAACGATAAGGA 57 15024245 15024263 GAAGGCATTTAACGCATGG 57 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 1 2 4 81 2R 15196009 15196085 CCAATGAGGTGATCTTCGTG 58 15195947 15195966 AGACCCTTCAATAGACCCTG 58 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 2 2 2 80 2R 15266798 15266816 AAGTACGCGCATAGATGAG 57 15266859 15266941 GCAGCAATGTTATCTTTGGC 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 2 10 10 80 2R 15298012 15298105 CAACAAGAGTCACTTTGTCCT 58 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 3 4 19 85 2R 15370532 15370551 GATGCCCGATCAGATAATGC 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301505,FBtr0086450,FBtr0086455,FBtr0301506,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0100392 3 8 19 105 2R 15361450 15361469 AACGTTATTCCTGCAGAGAC 58 15365203 15366258 CTCTGGTTTGACCAGAGTG 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 1 5 19 96 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 3 2 2 170 2R 16150142 16150160 CTCAATGAGGCAACCTTCG 58 16149930 16149948 CAGAATCTTGGCCATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 3 2 2 104 2R 16502088 16502106 TTCTTCCATTCCGGTTGCT 59 16500968 16502023 GCAATAGACCTCTTTGTCATCC 59 NA Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 2 1 1 82 2R 16757934 16757952 ACTGTCTGAAGATCTGCGG 59 16758062 16758080 AGCATGAATGACTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 3 2 2 92 2R 16861135 16861426 TCTTTATGGCCGCTTTACC 57 16861061 16861079 GTGTCTCCGTAATCAGTCG 57 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 1 6 15 93 2R 16907282 16907300 GAATGCCACGAAGAAGGAC 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 2 2 2 99 2R 17107085 17107186 CATTGTCAAATTCCTCGTTGAG 58 17107007 17107026 GGACAGATTATTGCAGCTGG 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680 3 1 2 60 2R 17557261 17557279 CATACAAGCCTGTCTGACC 57 17557158 17557176 CTCAAGGACATCCAAGCAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 1 2 2 81 2R 17585805 17585908 ACTGAAGGATAAGACCGAGTG 59 17585744 17585762 GGCCTCGTACTCCTTTACC 59 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 1 2 2 80 2R 18703125 18703200 ACCATCACATTCAGATATCTCC 57 18703241 18703259 TTGCTACTCAGTTCGTCTG 57 NA Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 1 2 2 83 2R 18782169 18782187 TTGTCTGCTGTCCCATACC 59 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302771 2 1 13 90 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817840 18817924 TCTCTTCCAGCAACTGCTC 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 2 4 4 60 2R 19487892 19487970 TCCTGCTAAACGTCAATTCAC 59 19487852 19487870 GTTAAGTTCCTCGCCTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 1 2 2 133 2R 19576225 19576468 GGATGTAAACACATTCAACGAG 58 19576561 19576580 TGTAGAACATGTTCGATCCC 57 NA Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 2 2 2 80 2R 19908839 19908914 CAGAAGATCGAGGAGGTGTC 59 19908778 19908796 CAGGTAGGACGAAGTCTCG 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072189 2 1 2 92 2R 19924562 19924580 ACAAGTACATGCAGTCTCG 57 19924428 19924509 TGAATAGTTCCCTAACGTTCAC 58 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299700 2 1 3 84 2R 20304113 20304210 AGCCCAAGTTACGTAGTACC 59 20304048 20304066 GAATTTACGCTGAGCACGG 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 2 3 6 80 2R 20817806 20817880 TGCACATGAAGATCCAACG 58 20817744 20817768 ACTTAAGGAGGTAGTAGAAGAACAG 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 1 4 4 177 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 1 4 4 93 3L 177318 177390 ATCTTAGCACAACCGTTCAC 58 177244 177262 GATCAAGGGACACTCTGCA 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571 3 1 4 133 3L 344209 344227 AATCCAACCAAACTTGGGC 59 343640 344114 TTTAGGATGGTTCCTCTCCTG 59 NA Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 3 2 2 80 3L 368937 369018 TGAACTATGTGATCAGCAACC 58 368877 368895 TAATGCTATCCGGACTGGG 58 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 3 1 2 247 3L 711823 711841 TACCTTTCTCTTACGCCGT 58 711535 711554 CGATATCTGTCATTCCCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0072662 1 1 2 80 3L 1290466 1290540 GCTGTTAGGTGCCATTGAG 58 1290583 1290602 ATCTGGGAGTTTATGCTCGG 59 NA Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 1 2 2 80 3L 1603334 1603355 GTAGAGAAACAAATAGACTCGC 57 1603396 1603472 CGTTGTGGTTCCTATCGAG 58 NA Nonspecific Drosophila melanogaster 61 metl FBgn0035247 FBtr0072814 2 1 2 93 3L 1638910 1638928 GTGTTCGAGTTTAACGCCT 58 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 3 2 2 84 3L 1749646 1749727 TGGATAAGGAAGGAGTGCG 59 1749774 1749793 GCTCTCAGGCAGGAATAGAG 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0301465 1 1 3 91 3L 1945570 1945662 TCAAAGTTGCATCAGCGAC 59 1945497 1945515 ATTGGGACTTACAGGCGAC 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302679 2 1 12 175 3L 2465570 2465983 CCAGATGGATTCCTAGTCAGAG 59 2466117 2466137 GGCTGAAGAAGCTTGTATAGG 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 3 3 3 80 3L 3227695 3227783 TACTTCTCCAGGGAGAACCT 59 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 2 5 5 66 3L 3300762 3300780 TAGTACCACCGATCTGGAC 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 2 5 5 82 3L 3310690 3310776 CATTCCTGTCTGTGAAGATGTC 59 3310818 3310837 CAAAGCACCCAAGACTTCTG 59 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073072 1 2 4 164 3L 3366082 3366101 GCCAGGAGAATCTAGTTGTG 58 3366300 3366452 GCGGATTATCCGATTGTCTG 59 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302565 1 1 3 132 3L 4195133 4195153 GGTTCATGTGGAAATTGTCCC 59 4195381 4195852 CATACCATTGCGCTGTGAG 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301096 1 1 4 80 3L 4564538 4577926 TACGTAGACTTGATACACAAGC 58 4578773 4578792 ATGTTGATGCCTTATCGCTG 58 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 1 2 2 89 3L 5138225 5138302 CACAAAGGGTTATGCGACC 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599 2 1 5 121 3L 5160148 5161352 AATGTAAAGGTTACGGCTTCG 59 5160047 5160065 ATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112711 1 1 8 96 3L 5735136 5735220 GAGACCCTCCTATGCTCAG 58 5735280 5735298 GTGACAGTCTACACAACCG 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112714,FBtr0112709 3 4 8 159 3L 5724590 5724608 ACCTCCTTTGTGGATCCTG 59 5724731 5727578 ATTTCCGCGTTTCTTGCTC 59 NA Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 2 2 2 67 3L 5788652 5788671 CAGGATTTGTCCAAACAGCA 59 5788199 5788217 AGATTCTCGTACGTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 3 2 2 195 3L 5927082 5927165 TACAAGATAAAGGGCTTCACCA 59 5926908 5926926 TCAGCGAGCCATACATCTC 59 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 2 2 2 93 3L 6173207 6173290 TGAGTGCAAGGTTTGTGGA 59 6173132 6173151 CTCAATAGCACGAAGCACAC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 5 6 107 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555512 6583716 ACATAGATGTCTTCTCCCGT 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106 3 6 11 159 3L 7042047 7043665 CTTCTCAATACGCCAACGC 59 7043785 7044352 GATTCTGTACCCTGGATGAGAG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 1 9 9 80 3L 7176524 7176542 ATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 3 6 9 124 3L 7157973 7158040 GTTTGCTACAGACACATGCT 58 7157868 7157886 ATGGTGGCATAATACCGCT 59 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691,FBtr0299693 1 3 3 140 3L 7322409 7322427 ATCGATTTGCCTATGCCCT 59 7322596 7322614 AGAGTCCTTTCCTATCGCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 2 2 2 150 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328865 7328883 CTAGCGATCTCTTGACCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 3 4 5 229 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0301611 1 2 3 89 3L 7375356 7375374 ATGACCAGGGAGTTGATGC 59 7375427 7375497 GATCGAGAATGCTTGGTGC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0076811 3 1 2 86 3L 7753745 7754669 TCCTTTGATAAGCCAACGC 58 7754719 7754737 CAGAAGACAGGTGTTCCTG 57 NA Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 1 2 2 106 3L 8172114 8172135 CTGACAGCCATTTACATTAGGA 58 8171966 8172048 TGTAGGTAAGTCTGGCTGTC 58 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 1 3 3 80 3L 8270065 8270540 AGCTGTACGAAACCGATCC 59 8270584 8270602 AGTTGGTGTATTTGCGCAG 59 NA Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076615 1 1 2 162 3L 8420493 8422148 ACGACACTGAGGACATTGG 59 8422274 8422292 TAGAGATCGTTCTGCACGG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 2 3 13 177 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631265 TACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 2 5 13 118 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630553 8630571 TTCCTGGGATCGTACTGGA 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 3 5 13 141 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630575 8630594 GAATGGCTCTGTAGGTTTCG 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302584 2 1 5 111 3L 8790225 8790246 ATGAGATACTGGAATCTCTGGT 58 8790318 8790799 CTGCGCTTCAATGATTTGC 58 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 1 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 2 2 4 99 3L 9346894 9346915 GACTGGAACAAGATTCAGAAGC 59 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428 1 1 2 104 3L 9490532 9490727 ATTGGCAATCCGAATGCAG 59 9490446 9490465 CGATCGTCTGTACACAACTG 58 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 3 2 2 117 3L 9723646 9723664 AGTACTACAGCGGTCTGTC 58 9723837 9723855 TCCTTCCACTCAGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303 3 1 3 80 3L 10216051 10216072 CAATGAGACTAAATAAGTCGGC 57 10215175 10216011 TTCCGGTAGGTATACTCCTG 57 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076301 3 1 3 128 3L 10218061 10218079 GGATTCCAGCCAAATGCTC 59 10217329 10217971 CATAAACCCGTAATTCGTGGG 59 NA Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 2 2 2 137 3L 10631790 10632322 CCTAACATTGGTCGTCCTG 58 10632423 10632441 GGCTTGAGTATCAGCTTCC 58 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 1 4 4 114 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865344 10865362 GCTTGATATCCGGATTGGG 58 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 2 3 4 119 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032753 11032771 ATTGTAGTTGCCATCCTCG 57 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 3 2 2 101 3L 11438751 11438769 CAGGAGACTTGTATGTGCA 57 11438897 11438915 CCTGATTCAGAACCACCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 2 4 4 99 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600360 11600378 CATTGTAGTGTGATCCGCG 59 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300726,FBtr0300097 2 2 3 83 3L 11684343 11684425 GAGCAGCAATATAAATAGTGTCCTC 59 11684284 11684305 TTTCCATTGTGAGAAGATTGGG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 2 5 5 116 3L 11694671 11694689 ACTACATATGCGCCTTCCT 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 3 4 4 82 3L 11780327 11780347 TGGAAACAATGGTCATTCCTC 58 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 2 3 4 80 3L 11769480 11769501 TCGTTTACACATTCTTTCACCC 59 11769359 11769441 GCTTCACCTCCTTTATCTTCG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 2 3 6 104 3L 11811260 11811278 GACATTCTACTGCGTGCAG 59 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075 3 1 2 122 3L 11825337 11825982 GGGAAAGTTCAGGTCTTCC 57 11825233 11825251 CTCATACACGGAGAAGGTC 57 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 1 2 2 63 3L 12193845 12193863 CAAGCAGAACACCAATGCA 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 3 2 3 83 3L 12838945 12840160 AATTAGCCACGGAACTTCGA 59 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 3 3 3 114 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033097 14033179 CCGGCTTGTTAAAGACCTG 58 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 2 2 3 91 3L 15104079 15104197 GGTTCAAGTTGTCCCACAC 59 15104252 15104270 CCTGTGGCTTTGAAGATCC 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 2 2 4 107 3L 16404181 16404199 ATCTGTACCAGTTCTCGCG 59 16400450 16404114 GATCGACATTCTCGTATTTCAGG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 1 3 10 84 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075186 3 1 2 85 3L 17723367 17723385 TATCGACCGAAGCTCTGTG 59 17723433 17731749 AGCAACTCAACCTGTATCGT 59 NA Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 1 2 2 80 3L 18865209 18865281 GCAACATGAATGAGGTGGA 58 18865147 18865165 GCTTACAGCGGAGATTCAC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075010 2 1 12 80 3L 19295087 19295105 GCATTAAAGATCCGGAGGG 58 19294963 19295043 AGTCGAAGGGTAGACACTC 58 NA Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 3 1 1 92 3L 19910148 19910166 CACTACGAGACGTCCAGTG 59 19910288 19910309 TTCCTTCTCTTTCTCCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 3 2 2 97 3L 20305626 20305644 ATCAAATCTCGCGTATGCC 58 20305704 20305790 TGAGAAGTTTAGCTGCACAG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078307,FBtr0078306 1 2 3 85 3L 21224137 21224155 ATTTGTGCCCTGCAAAGTC 59 21224203 21224278 GAAAGAATCCCTTGCAACCC 59 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 1 3 3 80 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 2 3 3 85 3L 23741800 23741875 CATATGTCAACAGCCAGACAG 59 23741916 23741940 GTTCCTTCATTACATTGAGTAGAGC 60 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0301772,FBtr0300789,FBtr0301768 1 3 21 165 3R 110120 113803 CCGTTAAAGATGCTGCAGG 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912 3 1 2 105 3R 189510 189948 TTTGCGAGGAGCTAAAGCT 59 190015 190035 GCAAAGAACACTCCTATCACC 59 NA Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946 1 1 2 155 3R 252616 252634 CTGAGCCGATATTCTGGTC 57 252356 252447 GAAAGTCGTTGTAAATCAGCAG 58 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 2 3 5 123 3R 454060 455857 CCTAATGGACAGACTGGCC 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 3 2 2 80 3R 776119 776202 TAACATCCATACAGTCACTGCT 59 776060 776079 TTTCTTTATACAGCTGGGCG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078818 2 1 19 83 3R 1120590 1121371 CAAAGACCGCTATTGTTTGTC 58 1120527 1120545 CCACTGTCTACGGTAACGT 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 2 3 3 121 3R 1314884 1314902 AAACCAAGGACTTGGTGTC 57 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 2 3 4 96 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385832 1385850 TACCCTGGTAAATGCGCTC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 2 5 5 117 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216706 2216724 TGGAACTGGTGATTCTGCA 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 3 5 5 125 3R 2217058 2217076 GATCCAATGCACCAAGGAG 58 2216805 2216890 TCAAAGACAGCCTTGATGC 58 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081673 2 1 3 188 3R 2313034 2315355 AAAGTCGGCCAAATTGGAC 59 2315949 2315967 TTTAGCCTATCGCACTCGT 58 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 1 3 3 80 3R 2667000 2667019 GCAATGGAAAGAAGAACCCG 59 2651394 2666959 CATTGGCATTCACAGTACTCG 59 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 3 2 3 94 3R 2888146 2888167 GAAGGATCTGAATCTTGTGCAG 59 2888222 2888306 CACAAGTACCTTCCTGGCA 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600 2 2 3 82 3R 3045192 3045269 TCCACCATGATACTGTGCA 58 3045128 3045146 GAGATGAGAGTGGGCAGAG 59 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113345 3 1 2 82 3R 3613168 3613252 GAAATTAGCCCTGAAATGGC 57 3613105 3613125 GATGAGGGACAATTGATTGGA 58 NA Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 3 1 1 93 3R 3638248 3638266 GAATTCGGAATGCTAAGCG 57 3638538 3638556 CGTGACCAACTCTTGTACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 1 2 3 81 3R 4068010 4068133 CAAGAAGCAGATTCAACCTAGC 59 4067950 4067968 CACACTGTGCTCGATTTCG 59 NA Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 3 2 2 156 3R 4174326 4174345 CAGCAAGTCCTAGAAATCGA 57 4174518 4174536 GATCCAACTCCTGTCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 1 2 2 60 3R 4576503 4576523 GGAGTGATGTATTTACTGGCG 59 4576397 4576417 TGAAGTGAATGATCATGAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 2 4 8 80 3R 4661221 4664122 GAGTCTAAGCCAGTAGAATCC 57 4661161 4661179 GGGACTTGATGCATACGAG 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 3 3 5 153 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044343 5044361 GACCAGGTGTGATCCTTCC 59 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 1 2 2 80 3R 5071307 5071386 CAGTTCCAATATGGGCAGC 59 5071245 5071265 AACACCTTGACCACTATTTGC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 2 5 14 96 3R 5258550 5269739 ATTTCAGTTCCGGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082041 2 1 3 80 3R 5284481 5286001 ATAGCCAAGCCAATACTCTACTC 59 5284423 5284443 TATCTCCTTCAGGTTCATCGC 59 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0082064,FBtr0082065 3 2 4 80 3R 5348544 5348564 ACTGGCACGAATAATCTTACC 58 5348605 5349934 AATGCCAGAGACTTGATTGC 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 3 2 4 100 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515508 5515528 ATAGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 1 2 2 82 3R 5597064 5597084 CGCATTGCTATTATTGGAGGA 58 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082208 1 1 9 80 3R 5841639 5844229 CCGCCAATATTAGTTCCAAGG 59 5841579 5841597 CGGTTTGCTTACAGAAGCG 59 NA Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 2 1 1 93 3R 6533585 6533603 CAAATGTCCGAGTTGCCAC 59 6533439 6533457 CACTCATGCATCCTTCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 1 2 2 80 3R 6839138 6845395 GTTGTTTACGGAGGCTCTC 58 6845439 6845457 TGTGTAATCGACAACGCTG 58 NA Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808 3 1 2 136 3R 6871148 6871167 CAATGCGAAATTCTCACGTC 58 6871263 6872117 GTTTATATTCGCCATCAACCTC 57 NA Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 1 2 2 148 3R 7043275 7043351 TGAGACATGAAAGGGAGGC 59 7043518 7043537 GGAAGAGTTGATGTGCTGAG 58 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 2 3 5 86 3R 7048442 7049127 ACAAGAACTGGTACAAGAGCA 59 7049175 7049193 TCTCGATGCTCTTCTTGCC 59 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 2 4 4 83 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264018 7264036 GTCTAGCTTCATGGAGGCA 59 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 1 3 3 94 3R 7279013 7279183 GATTGGAGAACCGAACTGC 58 7278937 7278955 TAGGCAGGGTCAATGTAGC 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 3 2 6 116 3R 7628403 7631767 CATCGATACTCTTATGTATGGTCG 58 7628310 7628330 TTCCTTTGCTTATCTTCCTGC 58 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 2 2 3 80 3R 7642966 7642984 TGTTCAGTTCGAAAGCCAG 58 7642468 7642924 ATCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 3 2 3 80 3R 7866655 7866732 AGGTCGTCTTAGGAAAGGT 57 7866773 7866794 ATATCTACTCTGTGAGTCTCGT 57 NA Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 2 2 2 99 3R 8210529 8210937 CTCACGGACTACTATTTCCC 57 8210999 8211017 AGATTGTGTTTAGCCAGCC 58 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 1 5 5 73 3R 8270798 8270816 TACCTCATGGTCACCTCTG 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 2 5 5 74 3R 8270797 8270816 CTACCTCATGGTCACCTCTG 59 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 1 1 1 60 3R 8467267 8467285 GGACTCTATGCCTCATCGG 59 8466968 8466986 GGTAGGCTAAGGAGTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 1 2 2 163 3R 8545129 8545147 TCTTGGACAAGCGCTACTC 59 8540714 8540734 CATGTACTTGTCCAGATCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 sim FBgn0004666 FBtr0082710 2 1 2 102 3R 8898260 8898391 AGCAGATTGCATGATATAGCC 58 8898454 8898473 CCAATTCACAGAATTCCGTG 57 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 1 3 3 94 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536294 9536312 CACTATCGACCTCCACGTC 59 NA Nonspecific Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 2 2 5 150 3R 9582374 9582912 GTCAGATCAGGAATCGCCT 59 9583026 9583044 TTGACCATGTTGTCCACCA 59 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 3 2 3 81 3R 10225507 10233891 GATCGCTATTTAGCAGAAATCG 57 10225447 10225465 ACATCTGTGCATATTGCGG 58 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 2 3 3 119 3R 10616866 10616885 TTACAGTAGTGCCTCGACTG 59 10616967 10619175 GTGGCTTGTATCTTGCCAC 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 2 7 13 147 3R 11122419 11125005 AAATACGATGAGGTTGCCC 57 11126515 11126533 AGACTTCCAGGGACTTCAG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 3 5 8 105 3R 11780833 11780853 GAATTACTTCTACCGCGTCTC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331 1 1 9 87 3R 12122989 12123007 GCGAAGACTGTTTCAAGAC 57 12123056 12123187 CTATGTCTCCATTGTCTTCCC 58 NA Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 2 1 1 68 3R 12149301 12149322 CTTTACCCGCATCAATAAACAG 58 12149408 12149429 ATGCCACCATAGATGAATAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 2 2 2 60 3R 12576907 12576926 ACTATTGGGTATGTGGTGTC 57 12576866 12576884 TATCGAAGGATGTTTCGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 3 3 4 92 3R 13044801 13044891 TATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 3 1 1 203 3R 14046276 14046294 TCCAGAGTTCGACATTCCA 58 14045905 14045928 GAGGAAAGATTCACACTAATAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 1 5 5 80 3R 14131624 14132351 GCAGCTCACTGAATATCCC 58 14131562 14131580 GAATACGGAGCACCATCAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0301284 3 1 14 176 3R 14261500 14288997 AATAAGCAGGTACAACACTGAC 58 14261273 14261291 GACAGGATGGTCTGGTGAG 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083764,FBtr0110919 2 4 8 80 3R 15310650 15310765 ACTCCGATAGTGATACGAGTC 58 15310807 15310825 ATGATTCCAGGACCTTGCT 58 NA Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 3 2 2 85 3R 16326280 16326615 GAGGCGCAACTATAAGCAC 59 16326213 16326231 TCGAGGAGCCATTGAAGAG 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 1 5 5 115 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396900 16396918 GACTCCACGCTGTTAATGC 59 NA InUTR Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 2 2 2 70 3R 16417403 16417421 CTTCCACAACTTCACCAGC 59 16417287 16417307 TCGTAAAGGACATGATGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 1 3 16 93 3R 17010984 17011004 TTGATGTGCAATCCTTACCAG 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 2 3 16 94 3R 17010983 17011003 CTTGATGTGCAATCCTTACCA 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067 2 1 22 81 3R 17200835 17200854 CAACAGTCCCAGAACTACAG 58 17181271 17200793 CACCTAAATCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 1 4 6 89 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615474 17616441 CACGAATATAAGCACCGGAG 58 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485 1 1 2 184 3R 18299470 18303810 GGGTATGTTATCCGAAACGA 57 18304015 18304035 CCAGACTCTTGACAATATCCA 57 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 2 2 6 174 3R 19093390 19093551 TTACGTGTGAATTTGCTGTCTG 59 19093237 19093257 GCTCGTAGTTCCTGTTTAGGT 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 2 2 4 174 3R 19453174 19457217 AGAGCCAAAGCTATCGACC 59 19453018 19453036 ACGTCGATATCAGCAGTCG 59 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 3 3 3 80 3R 19574387 19574471 CCGACATTATCATCAAATGGC 57 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 1 3 3 81 3R 19591779 19591860 ACATACCCAGAAACCTGGC 59 19591904 19591923 GAGATTGTGATGATGCGGTG 59 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 2 3 3 86 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688921 19691289 CAAGTAACCATTGTAGCCGAG 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089497 1 1 3 94 3R 19762361 19763156 ACCATCTGCTTGAATCCGT 59 19762285 19762303 CTTCTGGAACGACTCGGAG 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 2 2 3 164 3R 19762736 19763157 TACCATCTGCTTGCCTCAG 59 19762255 19762273 GATATCCTTCTCGGAGGCG 59 NA Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 2 2 2 80 3R 19822359 19822382 CGATTGAGTTTAGATGAGAAGGTG 59 19822420 19822499 CTGATCAAAGGCGTGAAGAC 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 3 5 5 101 3R 19824625 19824644 ATAAGGAGCGTGATCTCGAG 59 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 5 6 81 3R 20045367 20045387 TGAACATCTACAACGAACCGA 59 20025658 20045326 GGTGGATTCACGGTAAATGAC 59 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084621 1 1 3 80 3R 20209176 20209259 GTATTTACACTGGATGAGCACG 59 20209117 20209135 ATGGCTGTGCATGATTTGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0301581,FBtr0100637 2 4 18 110 3R 20508114 20512919 GGGCGAAGACATATTGTGG 58 20512993 20513011 AAAGACCACTTCGACATCG 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100623,FBtr0100629,FBtr0100633,FBtr0084683,FBtr0100638,FBtr0100635,FBtr0084685,FBtr0084684,FBtr0100627,FBtr0100631,FBtr0100636,FBtr0100634,FBtr0100622,FBtr0100637 1 15 18 124 3R 20505299 20512928 GACATATTGTGGTATGCGGTC 59 20513014 20515056 ATCGGGTGGTTTACGATGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100633 2 1 18 112 3R 20523982 20528754 ACAATGGAGGGTGATATCACTC 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084700 3 1 3 80 3R 20644564 20645463 CGATAAAGAGAAATCGACAGC 57 20645505 20645523 GATCCCGATTTACTGCCAG 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 1 1 1 60 3R 21104511 21104532 TCAGTTTAAATTGGAGGTGGAG 58 21104410 21104429 CACCACTACCGTAGAATGCA 59 NA DesignNoJunction Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 1 2 7 149 3R 21539672 21544127 CGGATTGGAATCAACTTGCA 59 21539357 21539375 ATCAAGGAGGAACACAGGC 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100 2 4 10 110 3R 22402355 22404452 ATCAGTGAGGAGGTTGTGC 59 22404526 22404544 GAATATGCCAGGCTCTCGA 59 NA Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 2 1 1 77 3R 22460622 22460643 CACATTGGTTATATCATGCTGG 57 22460736 22460754 ATACTGGTAGCCCAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134 2 1 2 80 3R 22796052 22796377 TTCCGTTTCACATTGTGCA 58 22796421 22796439 GAAGGCACAGGATCTTCTC 57 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 1 5 5 124 3R 23101498 23102023 ACATGACGGTATTTGGGCT 59 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA InUTR Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 3 1 1 88 3R 23515657 23515675 CTCTGACGGCTATCAAGCA 59 23516275 23516293 CTTCATGAAGCCCATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 1 5 5 126 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 1 4 4 80 3R 24146990 24147104 TATGAAACAGGTCAACTGTACG 58 24146931 24146949 CACCTCCAACTTCTCACCA 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324 3 1 6 191 3R 24638554 24638692 AGATAGAGGATGACGCTGG 58 24638847 24638865 CATGTTGTGAGCTGGAGTC 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085378 1 1 10 92 3R 24956914 24956936 GTCACACTAGATTCATAGTTCGG 58 24956988 24957860 CATCGGGATTGAGCAAGTG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0110981 2 1 5 83 3R 25245685 25250157 TTATTATCGAAACGCGGGAG 58 25250202 25250221 GATATGACGTCGCATTTGTC 57 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 1 5 6 205 3R 25705384 25705403 GCAGTTACTCTGACTAGCTG 57 25723060 25723078 TTGTTGAAGCCGATGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551 2 1 2 80 3R 25827419 25827555 TCTCCTGGAGGTCTTCTCC 59 25827598 25827617 CCTTCGAACTTGAGATCGGT 59 NA Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551 3 1 2 81 3R 25827418 25827554 ATCTCCTGGAGGTCTTCTC 57 25827599 25827617 CCTTCGAACTTGAGATCGG 58 NA Drosophila melanogaster 61 CG7950 FBgn0260468 FBtr0085564 2 1 2 64 3R 25882743 25882847 CTGGACGTGAAGATATAATTCACG 59 25882870 25882888 GTCACGGAGTCTGGATCAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 1 2 2 81 3R 26332231 26332251 TTCAGTGGACTTATTCACTGC 58 26332293 26332365 CCATCCAGCGATGTATTGTG 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 3 6 12 140 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397643 26397663 CCAGTATGGTTATCTCCTCGG 59 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 2 2 4 80 3R 26742432 26749147 AGAAACTCAGAATTTGGGCC 58 26749187 26749208 TATCCAAACTATTTGCTACGGC 59 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 1 4 4 107 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 3 6 6 85 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554169 27554187 TCTTCATGATGGCTCACCA 58 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 3 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 3 3 3 111 4 231099 231188 TCTGATAGGAACAGCTGGT 57 231260 231281 CTATCGAGTTACTATCACGGAC 57 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 3 4 4 83 4 596940 597612 TTAACGGAAACGATGACCAC 58 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 1 2 9 140 4 1059052 1060648 TGCTCTTCAGCTAGACGAC 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0290017 1 2 8 172 X 395000 396028 CTTGTTTGGAAGGCAACTG 57 396162 396182 GCTAACGATCCAATTTACCAG 57 NA Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 3 1 1 130 X 1056324 1056343 TATTCGGATATTCGCAGTGC 58 1054060 1054078 CATTGTTGTTCGCACAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070318,FBtr0070320 1 2 3 93 X 1822530 1822548 CTCTATCCGACGGATGAGG 58 1822600 1823043 GAATATCAATCTGGTCCATGTCAC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 77 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 2 2 3 97 X 2234993 2235012 GTTGGTCAAACATGTGACCC 59 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528,FBtr0070457 3 2 3 135 X 2341621 2344711 AGTTTAAGGCGAGCATGGT 59 2341504 2341522 AACATGCGATACTGCACCT 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0112811 2 1 8 90 X 2385412 2385430 ACATATGTTTGCGAGGCTG 58 2384864 2385358 CAACGTCGTTATAGCGCTC 59 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 3 2 2 60 X 3464391 3464409 CCCAGGTTTATGTACCGGA 58 3464716 3464736 CCTCTGGCAGACTTATATTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 1 3 3 140 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770518 3770538 CGGTATCATCAGAATAGCCCA 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 2 4 6 118 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848235 4848253 GGTCATTAAATCCGCGTCC 59 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 2 4 4 80 X 5317775 5317861 CGGAGAAGAATTCATCTTACCTG 59 5317901 5317919 GTACCCTTGATCATCGGCA 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070844 3 1 2 107 X 5611458 5611477 AATTCGATATCCATGCCCTC 57 5608837 5611388 GTCGGCTATAATCTCCTCG 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0301324,FBtr0112704 2 3 6 84 X 6481125 6482106 GCAGGAATATGAGAACGTCC 58 6482153 6482171 GAAATGGTGTATCAGCGCA 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 3 4 21 82 X 6986733 6986757 CGTCCTACTATAACTTTAAGATGGC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 2 3 3 81 X 8333722 8333742 AAAGAAATGCTTTCCCGAGAG 59 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 3 3 5 94 X 8994611 8994631 CAAGGGCGAGATAAATTTCCT 58 8992438 8994557 TGTCCTGATCTAGATGGATGC 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 2 3 3 80 X 9232367 9232386 ACCTGTAAGTTCTATCGCCC 59 9232241 9232326 ACAGTGATGATCGAAGGTCTC 59 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071366 3 1 2 191 X 9502315 9502761 TGTCCAAGAATGAGCTAAAGC 58 9502144 9502162 GTGAACGTTTCAGCTCCTG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 2 2 2 150 X 10983473 10983559 ATTCCTTATCGACCCTCGG 58 10983673 10983691 TATCCTCCCAGAGTTGCAG 58 NA Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 3 2 2 172 X 11005431 11005513 CCAACGAGGATCAGAAACTC 58 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 1 7 15 107 X 11275918 11275936 TTGGATGACTCGAAGAGCA 58 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073486 1 1 15 133 X 11284564 11288265 TCTGGATTCGCTCCATAAGG 59 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 1 4 15 93 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299368 11299386 TCCCAGAATAATCACCGGG 58 NA Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 3 2 2 82 X 11684958 11684976 CATCCACAGAGGAACTTCC 57 11685019 11685105 GTTCATCGTTATATGCTGATCC 57 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 2 6 7 81 X 12168211 12168229 ATTCCCGTTGCGTAATTCC 58 12168271 12170563 GCGTTTATCTATGTGAAACCTG 57 NA Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 1 1 1 70 X 12271382 12271400 AGACTACCTGGGAGTACAC 57 12271221 12271239 AAAGATGAAGACCTGGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 3 2 3 80 X 12331010 12344326 CAAATGCGAAGAATGTGACG 58 12344369 12344387 AGTTTCTGATTGACACCGC 58 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 3 4 4 82 X 12550118 12550137 CTGAACTATTGTCGTAGCCT 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301299,FBtr0301298 2 3 3 82 X 13159985 13160085 GATCGTCGATTGGGATGTG 58 13159921 13159945 GTATGGAAAGATATAGAATGTCGGG 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 83 X 13268113 13268132 CATTCAACCGTTAGACGTCC 59 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 83 X 13268113 13268132 CATTCAACCGTTAGACGTCC 59 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 2 5 10 106 X 13493487 13494114 TGAAGAGTACACCAGCTCC 58 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073906 1 1 3 108 X 14150124 14150526 AGATCTCAAAGACGGACCC 58 14150598 14150616 AGGTCGTTTGTAGTGGGTG 59 NA Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009 3 1 2 119 X 14894752 14894770 TCTCCAAATTTCGTCGCAC 58 14894853 14896157 TGGCTGGTAGCTTAGTTCG 59 NA Drosophila melanogaster 61 CG6294 FBgn0030640 FBtr0074034 3 1 1 83 X 15358421 15358439 CTATCCTGCGATTCCTCCT 58 15359791 15359809 TTGGTTCCGTATCCAATGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 2 3 3 187 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377388 15377406 ACATCGGCTTTGTCTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 1 5 5 167 X 15688455 15688539 AAGATCCACGTAACAAAGTTCC 59 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074109 3 1 6 91 X 15754279 15754300 TGCGTGTAAGTAACGTATTGTC 59 15754346 15755199 GTGTATTTCAGACCTCATAGATCAG 59 NA InUTR Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 2 4 4 85 X 15769163 15769181 GCTAGATTTAGGCGATGGC 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161 3 1 3 94 X 15831777 15833079 AAGAGCATAAGTTCCATGGGA 59 15831703 15831721 CCAAAGCGATCCTGAACAC 59 NA Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 2 2 2 80 X 16161737 16161816 ACACAAGTTCCACTTTACGAG 58 16161677 16161697 AGGTTCTCCTGTATAGTTGGC 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 3 3 4 92 X 16190156 16190353 CCCTAGTTGCGATTCTACAG 57 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121 1 1 4 80 X 16377760 16377778 AATTCACGATACACGGCGA 59 16377129 16377716 AGTTGCCAATCATCGTTGC 59 NA Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 1 1 1 60 X 16506699 16506717 CAAGCAATGCTTGAAGGCT 59 16507573 16507591 GATGTCGCGATGAATGACG 59 NA DesignNoJunction Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 2 2 2 113 X 16554497 16554582 AGTTTCAAGCACAAGATGGAG 58 16554657 16554675 ATTAACTCCGTGTTCGGCA 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 3 5 5 90 X 16718725 16718743 GAAGGGATACCATGTGTCG 57 16718794 16718964 CAAATAGATTTGGTACTGCTCG 57 NA Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 3 2 2 107 X 16721788 16721807 ATCATCTGCGGTTATGTCAC 58 16721630 16721719 GGAGTTGATATGTGGCATGG 58 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302833 1 1 5 117 X 17635043 17640617 TCATTCGGATACGTCCTATGAG 59 17640695 17640713 GAAGTTGGTGAAACGCGAG 59 NA Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 3 2 2 86 X 17990414 17990432 CTGCGCGAAATCAAGAGTC 59 17990480 17990562 CAGATCGGTTAACAACCACTG 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 3 3 7 93 X 18003567 18003585 GCGAAGAGTATTACGAGCG 58 18000954 18003511 AGATCGTTGATCTCCCAGTC 59 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616 1 1 2 95 X 18532347 18532365 AGGAGTTCCAGACGAATGG 59 18531811 18532291 TGTATTTATCTCGCTTGTTGCC 59 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 2 5 5 80 X 19457157 19457177 CATCTCCAAGTACCAAATGCT 58 19457035 19457116 TCCTTCCAAATCTTGCACAG 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 1 4 13 133 X 20105880 20105899 TCTACACAAAGCAGACCCAG 59 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 1 2 2 80 X 20385202 20385384 AAGCTTTACATCTCTGGTGG 57 20385427 20385445 CCAGACTTCCGTCTTTGTG 58 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 2 2 4 116 X 20990664 20990688 GCTCTAATAATGATATCCTCCAAGC 59 20990877 20991013 CTTTCAGCTCCAGTTTGGTC 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 3 5 5 80 X 21227988 21228077 CTATCTGACCAAGGGCTGG 59 21228119 21228139 TCACATTTCACATGGATCCAC 58 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 3 5 5 102 X 21868783 21868863 AGATACTCCACGAATTTGCCA 59 21868927 21868945 CGATGTTTGGTCGAGAACG 59 NA Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 1 1 1 77 X 21941597 21941615 AAATCCGAGTGGAACGAGG 59 21940518 21940538 GAGATCTGGGTGTTTATGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 3 2 2 170 X 22246595 22246613 TTATGTGGCCAGACTTGGG 59 22230962 22230981 CACCATTCTCTGGACATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG40172 FBgn0058172 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33739 FBgn0053739 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31896 FBgn0051896 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Ae FBgn0011891 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Ed FBgn0011895 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me5.8S-G74 FBgn0086066 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A2634a FBgn0082946 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A774b FBgn0086078 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-G1358b FBgn0086054 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U3344b FBgn0086048 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:K FBgn0013697 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U3:9B FBgn0065046 FBtr0091641 2 1 1 110 X 10242243 10242261 AGTTGAATCGTTCTGTCCG 57 10242335 10242353 CTATCCGTTCAAACCGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1232 FBgn0082997 FBtr0113561 3 1 1 71 X 6637773 6637794 GTGGTAACTCAATGAAATGCAC 58 6637723 6637741 AAATTCTGCACGGATTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34334 FBgn0085363 FBtr0112536 1 1 1 60 X 22275627 22275645 CCAGCTCCCATAACAATCC 58 22275669 22275687 GGAATTGGTACCGGAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32857 FBgn0052857 FBtr0070052 3 1 1 103 X 21488280 21488298 GAGAGCTTGAAGTTCCTGC 58 21487144 21488213 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 CG33502 FBgn0053502 FBtr0070055 3 1 1 103 X 21482188 21482206 GAGAGCTTGAAGTTCCTGC 58 21481052 21482121 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 Ir20a FBgn0031181 FBtr0077213 3 1 1 60 X 21349505 21349524 TGATCCTCTACTCCTTCCGA 59 21349464 21349484 ACTGAAATCCAACGCATTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stg1 FBgn0064123 FBtr0091649 3 1 1 80 X 20979254 20979345 CATTGTTAGTGGTCTAGTGATGC 59 20979382 20979403 CTTAACTTCGATCCGATTTCCG 59 NA Nonspecific Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274 1 1 3 83 X 20804399 20804417 AATGGTCAGGATGCTGAGG 59 20804277 20804352 CAGAATGCCCAACTTCTGC 59 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 3 2 2 71 X 19564759 19564839 TGTCTGCCGTACATGAAGG 59 19564874 19564892 GTACTCATTGAGGGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12237 FBgn0031048 FBtr0074761 3 1 1 63 X 19536354 19536373 ATCATCAGTGACTCGAACAG 57 19536310 19536328 AATCGGCCAAGTTATGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 2 2 2 199 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18802347 18802365 AGAAGTAGCGCGAGATGTC 59 NA Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 1 2 2 107 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18801838 18801856 GTGTCCACCTGACCATACC 59 NA Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 2 2 2 100 X 18734583 18734674 TCATGAAATCAACCGTGAGGA 59 18734736 18734754 GTAGTAGTTCGCCTCGTCC 59 NA Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 2 2 2 132 X 18201378 18201396 CAACTGGATCGACTATCGC 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 CG15057 FBgn0030908 FBtr0074582 3 1 1 69 X 18166931 18166949 GATACTGGTGCTGGATGGT 59 18166880 18166898 CAGTCGAACCGGATTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 3 5 6 117 X 17173693 17173777 TGGACCAGATCTACTTGCAG 59 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 CG9947 FBgn0030752 FBtr0074301 2 1 1 83 X 16334743 16334761 GAGTATCTGGAGGCCAACC 59 16334434 16334699 GTATACCACACCATTGAAGTCC 58 NA Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151 1 1 2 251 X 15880704 15880773 TAGCAGGATCAACATGCTG 57 15880471 15880489 TTGAGCAGATCGTCCAGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 1 6 6 239 X 15755525 15755616 CCACCATCTAACAAGAGCG 58 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15601 FBgn0030673 FBtr0074055 3 1 1 75 X 15605453 15605471 CTTTCTACGCTCCGTTTCC 58 15605562 15605580 CGTCGTTAATTGAGCACTG 57 NA DesignNoJunction Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 1 2 2 80 X 15293122 15293257 CAGGGCCTAATGGTATACGA 58 15293061 15293085 CGCTATCATATCGAAGATAAAGTCG 59 NA Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 2 2 2 108 X 15200611 15204427 ATCTGGAGAACATGGAGGG 58 15204497 15204517 TCAAAGTAGGGAATGTCTTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp4s3 FBgn0030615 FBtr0074028 2 1 1 80 X 15009430 15009517 AGGCTGTTCAATCTATTTGCC 59 15009370 15009391 TGTGCTTAAAGAACACGTTGAG 59 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967 2 1 3 101 X 14966671 14967381 AAATGACATGCCAGTTCCC 58 14966588 14966606 ACATTTCGATAGACGCGAC 58 NA Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 3 2 4 263 X 14726731 14726749 GAATTGTGGCGACCAAGTG 59 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Clic FBgn0030529 FBtr0073835 1 1 1 80 X 13708912 13715971 AATTGATCATAAAGGCCTCGAC 59 13708853 13708874 ATAGGTCCATGAAGTACTCCTG 58 NA Drosophila melanogaster 61 Yp3 FBgn0004047 FBtr0073821 3 1 1 83 X 13654211 13654229 ACTACGACTACACCAGCAG 58 13654274 13654366 GGTCAATGATGATCAAATCGC 58 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 3 2 2 248 X 13502356 13502442 AACTAGCACAAACCATGCA 58 13502648 13502672 GATTCTGGAATGTAACTGAGATCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 1 2 2 80 X 13314322 13314405 GCAAGAAGGTCAAGAGTTCC 58 13314445 13314466 TTATCTCAAAGCGGAACTTCTC 58 NA Drosophila melanogaster 61 CG15719 FBgn0030440 FBtr0300371 2 1 1 80 X 12898406 12898477 TGATGGTTGAGAGCGAGAC 59 12898344 12898364 CAATGCCGATATTGGATCTCC 59 NA Drosophila melanogaster 61 CG1492 FBgn0030361 FBtr0073579 1 1 1 72 X 11904716 11904734 GTTTCAGTGACAAGCTCCA 58 11904591 11904609 TAAAGATGACACCTGTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1806 FBgn0030360 FBtr0073574 1 1 1 80 X 11903136 11903157 CTTGCCGTTTGGATACTAATCC 59 11903197 11903282 CAATAGCAGCGACAATCCAC 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451,FBtr0114452 1 2 2 83 X 11773136 11773155 GCATCCCTATAAACGTCCCA 59 11773011 11773095 GTGATAATGTTCTGGTAGATGACG 59 NA Drosophila melanogaster 61 CG10352 FBgn0030348 FBtr0073599 2 1 1 81 X 11769957 11770039 AGGGTGAAATCATAGGACCTG 59 11769896 11769914 GGTTTGCCCAAGGTTATGG 59 NA Drosophila melanogaster 61 CG11697 FBgn0030313 FBtr0073511 1 1 1 60 X 11466883 11466901 TTCTATCCAGCATTCGCGT 59 11466922 11466943 GATCATTGACGCTACAATTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1749 FBgn0030305 FBtr0073505 3 1 1 132 X 11377867 11377885 CGGATGAACATCGTCAAGG 58 11378090 11378110 AGTCGAAGAGTATCAGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1657 FBgn0030286 FBtr0073448 3 1 1 97 X 11227171 11227265 CATCATCAACTGCATCTCGA 58 11227325 11227343 CTACGTATATGAGCACGGG 57 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 3 2 2 112 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359180 10359198 CCGTAGTTCTTGTGATGCG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633,FBtr0300516,FBtr0300513,FBtr0300514,FBtr0300512,FBtr0299632,FBtr0300511,FBtr0300515 3 8 8 87 X 10172044 10172132 GCCTTTAGATTCAGCGAAGC 59 10171976 10171994 AGCTCTCGAAAGTCTCTGG 58 NA Drosophila melanogaster 61 CG9686 FBgn0030158 FBtr0071389 1 1 1 62 X 9774292 9774310 GATCGCTTCGATGACTTCC 58 9774336 9774354 ATCCTTGCTCATCTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 c12.2 FBgn0040234 FBtr0071321 1 1 1 80 X 9217685 9217703 TCATGTCCAGGAGAAACCC 59 9217745 9217818 CCATCGTAACCATTGAACCTG 59 NA Drosophila melanogaster 61 ric8a FBgn0028292 FBtr0071317 3 1 1 87 X 9150403 9150487 ACACAAAGAATGCGGATCTG 59 9150537 9150555 AATATGCCGAAGATGGCCA 59 NA Drosophila melanogaster 61 CG12116 FBgn0030041 FBtr0071240 2 1 1 60 X 8362501 8362521 GATGGATAATTTCATGGCGGA 58 8362461 8362481 GTGAAGGATTATGGAACGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1632 FBgn0030027 FBtr0071170 2 1 1 80 X 8163823 8163841 GAATGTGTCCATTGCGACC 59 8163885 8165986 GAATACTCCTCTTGCGTGC 58 NA Drosophila melanogaster 61 GIIIspla2 FBgn0030013 FBtr0071159 3 1 1 88 X 8052407 8052604 CTAAGAGACCTAGTTGGCCC 59 8052654 8052673 CGGTATGTTTGGTTAGCTCC 58 NA InUTR Drosophila melanogaster 61 CG42593 FBgn0260970 FBtr0301748 2 1 1 80 X 7844750 7844770 CATATTAGCGGATCCCATTGC 59 7844808 7844908 CACGTAAAGTAATCCTGATCGAG 59 NA Drosophila melanogaster 61 CG10778 FBgn0029980 FBtr0071131 1 1 1 186 X 7826320 7826580 TGATGTGGCAGTTAAGCAC 58 7826152 7826170 CGTTCGCTGTAGAAGTCAG 58 NA Drosophila melanogaster 61 CheA7a FBgn0029948 FBtr0071055 1 1 1 96 X 7272420 7272533 AGCAGAAGATTGTTCTCATGG 58 7272591 7272609 ATGAACTGACAGAACGGCT 59 NA Drosophila melanogaster 61 CG15034 FBgn0029946 FBtr0071064 3 1 1 65 X 7241065 7241083 ACGACCTTCAATTCAAGCT 57 7241018 7241039 GTTTCTTCAGAAGACGAATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12796 FBgn0029909 FBtr0070973 2 1 1 80 X 6726266 6726285 CCATGTTGACTCTGATCTCG 58 6726135 6726227 GGGTCATGTATCTTCTATAGTGC 58 NA Drosophila melanogaster 61 swa FBgn0003655 FBtr0070922 3 1 1 123 X 6259451 6259469 CAGACTTTGATGCGGATGG 59 6259165 6259365 TTATGATCATCGCCATCGAC 58 NA Nonspecific Drosophila melanogaster 61 Ubi-p5E FBgn0086558 FBtr0070933 3 1 1 83 X 6172525 6172543 TTGTGAAGACCCTCACTGG 59 6172460 6172479 CCTGGATCTTTGCCTTAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15767 FBgn0029809 FBtr0070813 3 1 1 60 X 5684164 5684183 CTTAAGGTGTCCCAGTACGA 58 5684203 5684224 GTTAAACACCTCATTCTCACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852 3 1 3 259 X 5559943 5559962 ACCTCTAGTAACGTAACCGA 57 5559502 5559721 AACGGTAATCGGGAATCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 2 2 3 80 X 5559771 5559789 TGGAGGACTTTCTCCTGTC 58 5559649 5559728 TTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 Mcm3 FBgn0024332 FBtr0070762 1 1 1 83 X 5219676 5219768 CAGCGAGGAGAAGAAGGAC 59 5219815 5219833 ATCTTCTCGTGACGCTGAC 59 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0070729 2 1 5 133 X 4824086 4830054 GTATTTAAGCACAAATGCAGCC 59 4823974 4823994 ACGGTGTTCACTGTTATTGTG 59 NA InUTR Drosophila melanogaster 61 CG15472 FBgn0029724 FBtr0070736 1 1 1 60 X 4663497 4663517 TAACGATCTAAAGACGACCAC 57 4663457 4663480 CAAGATATCGGAGTCCATAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12691 FBgn0029701 FBtr0070646 1 1 1 60 X 4160359 4160377 AGATCACAGTAAGCCTCCA 57 4160401 4160419 CGATAGTTCTTCACTCGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15570 FBgn0029697 FBtr0070645 2 1 1 80 X 4113691 4113709 CGTTGGAGCTAATCTCCCA 59 4113752 4113838 ACATCAGAGGACTGGTTGAG 59 NA Drosophila melanogaster 61 CG32790 FBgn0052790 FBtr0070621 3 1 1 60 X 3972951 3972971 AAACAGTACACGATTCTCCAG 58 3972993 3973011 CCTGCATAACAGATGCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gas8 FBgn0029667 FBtr0070589 2 1 1 135 X 3386464 3386559 AATGAGAAACTGCTAGAGCAG 58 3386349 3386369 CCTCTACCTCGAACATTTGTG 58 NA Drosophila melanogaster 61 CG14419 FBgn0029639 FBtr0070564 1 1 1 60 X 2779748 2779766 TCGTCTACAACCACTACGA 57 2779706 2779724 TTGTGGACTCTGACTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx4 FBgn0024980 FBtr0070494 3 1 1 125 X 2636016 2636603 ACTCAATCCGTACACGGAG 59 2635843 2635861 TGAAGCTCATCCATCTCGT 58 NA Drosophila melanogaster 61 CG3191 FBgn0023525 FBtr0070417 2 1 1 82 X 2145124 2145242 CACCTTTGACTACGCAGAC 58 2145060 2145078 ACTCCCGAAAGCAGTACAG 59 NA Drosophila melanogaster 61 Cyp4d2 FBgn0011576 FBtr0070387 3 1 1 84 X 2072238 2072257 GTAATTAAGGAGTCGCTGCG 59 2072304 2072378 GCTTGCCACGTATTTCCAC 59 NA Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 3 2 2 118 X 1948465 1948546 AACCCATGGAAAGAACCCT 58 1948623 1948646 GGTAAATAGAGGATGCATTTGAGG 59 NA Drosophila melanogaster 61 CG42527 FBgn0260432 FBtr0300856 2 1 1 157 X 1896378 1896502 ATACCAGAGATCCAGGCTG 58 1896623 1896641 GTATCAGGACCAGGTGGTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42527 FBgn0260432 FBtr0300856 1 1 1 158 X 1896377 1896502 CATACCAGAGATCCAGGCTG 59 1896623 1896641 GTATCAGGACCAGGTGGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14810 FBgn0029589 FBtr0070374 2 1 1 82 X 1714144 1714226 CATCCATTTCGAAGAACAAGAG 57 1714083 1714102 TTTCATCCCATTGGACTTGG 58 NA Drosophila melanogaster 61 CG11403 FBgn0026876 FBtr0070245 3 1 1 96 X 1131807 1131825 TTTGCTCATAGAGGCAGTG 57 1131671 1131689 GCAGGAAGCAAACTACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11382 FBgn0040367 FBtr0070205 2 1 1 60 X 1104678 1104698 TAAGTACGCACCATCTACCAG 59 1104720 1104738 GGTCTTGTGTTCATTCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 1 2 2 163 X 787631 787649 GGAACTCGACTACCACGAC 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG13369 FBgn0025640 FBtr0070115 2 1 1 80 X 518364 518444 ATTGGCAACATAGAGCACG 58 518488 518506 GCCCAGAGTTATGATCACC 57 NA Drosophila melanogaster 61 sc FBgn0004170 FBtr0070073 1 1 1 60 X 290446 290467 ATCAGTATCATCTCTATCGCCT 58 290483 290506 CTGGGATTGGTCTACATTATATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41591 FBgn0085808 FBtr0114262 2 1 1 109 U 7776176 7776195 ACAGTAGCGTAAACTAGCTG 57 7776086 7776104 CTCTGTCAAAGTACAGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40962 FBgn0085778 FBtr0114229 1 1 1 60 U 3652333 3652356 CAAGTATAGTTCACCATCTTTCGG 59 3652372 3652393 TCTAACTGGAACGTACCTTGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42437 FBgn0259868 FBtr0300165 1 1 1 60 U 9323373 9323391 AGCAGAAATGTTTGTCCGA 57 9323413 9323433 GCCATATCAACGATCAATCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42434 FBgn0259865 FBtr0300162 3 1 1 64 U 8685376 8685394 CTCCGAATACAGTCCTGGT 58 8685330 8685349 TTAAGTGGCATAGGGACTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42430 FBgn0259861 FBtr0300158 2 1 1 60 U 8078106 8078125 CTTTCGGTTGTACCAGAAGG 58 8078065 8078084 ATTCTTTGGTGAGGACTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42422 FBgn0259853 FBtr0300151 1 1 1 89 U 7568437 7568456 GCTTGTTCTACGACGATGAG 58 7568367 7568385 TTCGGTGCCTATCATTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR40820 FBgn0085523 FBtr0302336 3 1 1 87 U 7044694 7044712 TGATACACAGCCATGTTCG 58 7044625 7044643 CTTACCGTGAGTCGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 2 1 1 73 U 7799097 7799178 TACGGGAAGCCATGATTACTC 59 7799213 7799231 AAACGGTACCAAGTGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 mGluRA FBgn0019985 FBtr0089184 2 1 1 80 4 965212 966854 TGGAAATTCCTATGAGGTGC 57 966894 966915 TAAAGACATACAAGAGCCACTG 58 NA Drosophila melanogaster 61 CG1970 FBgn0039909 FBtr0089105 3 1 1 80 4 591277 591297 TTGATTCCTGGACTTTCACAC 58 591147 591236 CGTCTCCTGAGAAGTTAACG 58 NA Drosophila melanogaster 61 bip2 FBgn0026262 FBtr0089110 3 1 1 84 4 483733 483754 GTTCATAGATTATCCTGGACCA 57 483117 483691 AGAATCAGTAACAGGAGAATCC 57 NA Drosophila melanogaster 61 snoRNA:Me18S-G1189 FBgn0086058 FBtr0114334 2 1 1 60 3R 10197449 10197467 CCCTAATGATGCTGGACTG 57 10197407 10197428 TTCAAGATCTCAAGAGCAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 2 1 1 223 3R 27594040 27594117 ATGGCCCATCCAATTAATGG 58 27594303 27594321 GACATAGACACCGGACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 RNaseMRP:RNA FBgn0065098 FBtr0091662 1 1 1 60 3R 19556131 19556149 CGGTTTGAGTCTTCCATGC 59 19556089 19556109 AGTTGAGTTACCAGGAACTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11550 FBgn0039864 FBtr0085867 3 1 1 80 3R 27504560 27505066 TGTCATGAAGCTCTATTGCA 57 27504499 27504519 TCGATTACAATAACGTGTCCC 58 NA Drosophila melanogaster 61 kek6 FBgn0039862 FBtr0085821 1 1 1 270 3R 27484690 27484889 AGTCTGCTGGATTCTGCTG 59 27485123 27485141 CACCTCGGACTTCTTGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31002 FBgn0051002 FBtr0085813 3 1 1 105 3R 27220669 27220752 CTTTAATGAGGTCCTTAGGATTGC 59 27220587 27220607 GTTATTCAGCACTGTCTTCGT 58 NA Drosophila melanogaster 61 CG2267 FBgn0039792 FBtr0085672 3 1 1 81 3R 26454493 26454511 AACAATATTGGAGGTGGCG 58 26454376 26454448 TCCAGTCAGTCATCACTGG 58 NA Drosophila melanogaster 61 Osi23 FBgn0039771 FBtr0085696 1 1 1 80 3R 26270014 26270096 TTAATGGCTTAAAGAGGGTGG 58 26269954 26269975 AGTAACCTCCTAAATGTTCTCC 57 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 3 3 3 77 3R 26214988 26215009 CCAAGGATGATGAATATTGCCA 59 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CecB FBgn0000278 FBtr0085640 2 1 1 130 3R 26039362 26039380 CTGGTTGGCTTAGGAAGCT 59 26039192 26039210 TTGATTTCAACCTCGAGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531 2 1 2 95 3R 25642999 25643071 CTAGAAAGGTAAAGGCCATTCC 58 25642925 25642947 GACCATTCATGGACTTAAATCCC 59 NA Drosophila melanogaster 61 dmrt99B FBgn0039683 FBtr0085454 2 1 1 122 3R 25519547 25521280 GATGAGAGTCCTGTGTCCA 58 25521366 25521384 GGTCAGATTGAACAGTCCG 58 NA Drosophila melanogaster 61 Spase12 FBgn0040623 FBtr0085435 3 1 1 105 3R 25316610 25316628 GTTCTTCGGAATTGTGGGC 59 25316467 25316541 AATGGTGATCAGCGAGGAG 59 NA Nonspecific Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085424,FBtr0085422,FBtr0110981 3 5 5 81 3R 25300557 25301994 CGGAGTCAAGGATTATACAACTG 59 25302033 25302053 AGGTTGTAGTCATTATGCGAC 58 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085424,FBtr0085422,FBtr0110981 2 5 5 80 3R 25309109 25309200 CATTGTGGATAGATATGGTGGC 59 25309241 25309259 CTGCAGTACTCCATCTCGA 58 NA Drosophila melanogaster 61 CG31050 FBgn0051050 FBtr0085317 1 1 1 60 3R 24476144 24476162 CGTCGAGTACTGGAAACCT 59 24476044 24476120 TTGACTTGCGAAGACATGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 1 2 2 80 3R 23536244 23536339 TTATACAGGAGAGCGAGGC 58 23536380 23536401 TGCGCAGATAATACTTGATGAG 58 NA Drosophila melanogaster 61 CG17991 FBgn0039498 FBtr0085121 1 1 1 60 3R 23067621 23067640 AGTCTTTCAATGATGTGCCT 57 23067663 23067681 CAGAAGGGTATGGTTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34293 FBgn0085322 FBtr0112489 3 1 1 84 3R 22991079 22991161 GCTGATCAATGGATTCTTTCTG 57 22991016 22991035 TAGGGTTTGCATGTAGTTGG 57 NA Drosophila melanogaster 61 CG17191 FBgn0039473 FBtr0085152 3 1 1 82 3R 22845348 22845420 GTTGGCAACAGTAAGTGCT 58 22845284 22845302 AACTGCCGTCTATCTGAGG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100337,FBtr0100335,FBtr0100340,FBtr0100339,FBtr0085093,FBtr0100336,FBtr0100334,FBtr0085092 3 9 9 97 3R 22701115 22701274 GAGGAAGATGACATATGCGA 57 22701037 22701055 CCGTAGAACAACTTCAGGT 57 NA Drosophila melanogaster 61 TwdlD FBgn0039444 FBtr0085035 3 1 1 61 3R 22465809 22465892 ATCGTCCTCTGTCTGTTGG 59 22465917 22465935 GGTTGGTAGTTGTAGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 TwdlK FBgn0039439 FBtr0085053 3 1 1 64 3R 22453829 22453847 GGTCAGTACGATCAGTTGG 57 22453783 22453801 TTCAGGGTAGAGGCAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 3 3 3 84 3R 22293797 22293873 GCGATGATAGCGACTATGC 58 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG14543 FBgn0039404 FBtr0084968 1 1 1 86 3R 21882430 21882451 GAGAAGATCTTCAATCACTGGC 59 21882498 21882580 TTCTATGGCCACCTGTTGG 59 NA Drosophila melanogaster 61 CG4730 FBgn0039355 FBtr0084934 2 1 1 80 3R 21503177 21503257 CGTAACAAACTACGCATGCA 59 21503116 21503136 AAACTTTCGCATTTCCTCCAG 59 NA Drosophila melanogaster 61 Aats-gln FBgn0027090 FBtr0084866 1 1 1 60 3R 21089955 21089974 AACGCTTTGGGTATCTACTG 57 21089914 21089932 CGTAGTTCATGTTCAGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dan FBgn0039286 FBtr0084803 1 1 1 200 3R 21011079 21011097 TATCACCGAATTTCTCCCG 57 21015717 21015735 GATGGCATGGATCTTGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 3 3 3 84 3R 20864033 20864155 GATGAAGTCTCTGGCAATGAC 59 20863969 20863987 TGTTCCATGGAGTGTTGCA 59 NA Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089439 3 1 2 235 3R 20743223 20743440 AAGGACGAAGATGGTCGTG 59 20743006 20743026 CAGATTTGAAAGGGATCCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11069 FBgn0039244 FBtr0084712 1 1 1 80 3R 20721486 20721510 GTGGAGTATCTTAATATCAGTGAGG 58 20721548 20721621 CAGCAATAGCATGACAGGA 57 NA Drosophila melanogaster 61 CG33658 FBgn0053658 FBtr0091637 1 1 1 86 3R 20666497 20666515 AAGTCCAATGTAGTCGCCA 59 20666378 20666447 AATGTCGTGGTTGTACGGA 59 NA Drosophila melanogaster 61 Ppox FBgn0020018 FBtr0084664 1 1 1 60 3R 20486792 20486810 AGGATGGACTATTTGCCGA 58 20486750 20486768 CACTTCTCCTTTACCGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 3 1 1 90 3R 19874145 19874221 AAACAAACCTGCAACCAGG 59 19874275 19874293 AGAACGCAGTGAACATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 TfIIA-S FBgn0013347 FBtr0084526 2 1 1 74 3R 19716545 19716619 ACGAGCTGATTCAGTACGG 59 19716489 19716508 TGATGCTCTTGTCGAATTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31414 FBgn0051414 FBtr0113405 1 1 1 81 3R 19531812 19531893 CTATCACCTCAAATTTCTCGAACTC 60 19531932 19531950 GTTTAACGGCTCATTGCCA 59 NA Drosophila melanogaster 61 SPE FBgn0039102 FBtr0084440 1 1 1 80 3R 19513284 19513303 GATGTATGCTCCCAATTCCG 58 19513343 19513424 TAGTCGGTGTAGCTAACAATCC 59 NA Drosophila melanogaster 61 CG10157 FBgn0039099 FBtr0084435 2 1 1 81 3R 19505327 19505346 CATTCTGAGGAAGTACGGCA 59 19505384 19505466 GTTATAAACGTTATCCAGAGCTACG 59 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 2 2 2 80 3R 19057608 19057627 TCCAGTCACCTATGTGACAG 58 19057478 19057567 GGCACATTGAAGGTTACATCC 59 NA Drosophila melanogaster 61 CG13829 FBgn0039059 FBtr0084400 1 1 1 60 3R 18986939 18986960 GAACAATGCTGAACTTGTTTCC 59 18986848 18986867 TCGTTCGACGAGATATTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17111 FBgn0039048 FBtr0084355 2 1 1 80 3R 18889780 18889798 AGCGAGGTAAAGGAGAACC 59 18889660 18889739 AGCAGATATGAACGTTCTTTGG 59 NA Drosophila melanogaster 61 sav FBgn0053193 FBtr0084356 2 1 1 117 3R 18885700 18886106 ATCAGCCAACTAGCTCTCC 58 18885601 18885619 TACGAATCGCTGGAGTAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 HP1c FBgn0039019 FBtr0084309 3 1 1 60 3R 18571804 18571822 GAAGGATCCGCAAATGCTG 59 18571846 18571864 AATGTGACGGGAGTAAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 2 2 2 81 3R 18274273 18274291 ATAGTGCTGGCTATCTGCA 58 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218,FBtr0301029 2 3 3 80 3R 18208156 18208177 TATCGGAGATCATAAACACTCG 57 18208216 18208294 TTACAGCGATCAGGTTATTGG 58 NA Drosophila melanogaster 61 Ir94b FBgn0051424 FBtr0084249 1 1 1 60 3R 17942491 17942512 GACAAACTGCTAATCTATCGCC 59 17942452 17942472 TTTCGATTCGCTTAAAGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 3 2 2 60 3R 17854854 17854941 GTGATGTCTGGTTCAATGCTC 59 17854963 17854981 CCCATGTCTGCATTGTAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Cchl FBgn0038925 FBtr0084185 1 1 1 90 3R 17852198 17852216 AAGGCCAAGGACTTCAGTC 59 17852069 17852087 AGCGATCGACTATCCAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7922 FBgn0038889 FBtr0084109 3 1 1 171 3R 17308412 17308430 GGAAAGACCTTCATTGCGG 59 17308565 17308711 GAAGTTGGCCTGTTAGCTG 58 NA Drosophila melanogaster 61 CG5871 FBgn0038870 FBtr0084050 1 1 1 80 3R 17047402 17047421 CTATGTTAAGTGGCTGGCTC 58 17047462 17047541 TTGCTAAACCATGTGTAGCTG 59 NA Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 1 2 2 80 3R 16434820 16434841 CGTTTCGATACTCTCCAATGTC 59 16434881 16434964 GTGAAGTCCTTGGTGTTCTC 58 NA Drosophila melanogaster 61 Surf6 FBgn0038746 FBtr0083854 3 1 1 68 3R 15730386 15730404 TCTATCAGCGAGTCTTGGA 57 15730282 15730356 TCTCCTCATCTTCTTGTTTGG 57 NA DesignRelaxed Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 2 2 2 87 3R 14967735 14967823 AATACAAGCACAAGCTGGTC 58 14967667 14967685 AGCTCGTAGGAATCTGTGG 58 NA Drosophila melanogaster 61 CG31231 FBgn0051231 FBtr0083662 1 1 1 92 3R 14492641 14492659 ATCTTCGCAACCAGATCAG 57 14492712 14492801 GCTCGAATTTCATCACTTTCTC 58 NA Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 1 1 1 176 3R 14322981 14323592 CAAGGATCAATGGCAGTGC 59 14322823 14322841 AATTCATAACGCAGCCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 3 2 2 94 3R 14197166 14197470 CTGAACACAATTCTGGATTCCC 59 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 CG34035 FBgn0054035 FBtr0100090 3 1 1 81 3R 13238975 13239055 CCAGATTATGAGTTGACCATCAC 59 13239095 13239114 TGGGTTGATAAACTGCAGGA 59 NA Drosophila melanogaster 61 CG34053 FBgn0054053 FBtr0113472 3 1 1 93 3R 13230412 13230430 AATGGGAATACCGGAGGTC 58 13230280 13230355 GTTCGTTGACATAGGCCTG 58 NA Drosophila melanogaster 61 CG31268 FBgn0051268 FBtr0083390 1 1 1 92 3R 12857938 12857956 ATTTCCGGGACCAATTGGT 59 12858011 12858095 TCATTGCTGCCTTGTTTCTG 59 NA Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110962 2 1 2 186 3R 12298435 12298453 CTACAGCATCCTCCTCGTG 59 12299206 12299224 TGTCCGGATAGATCTGGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 1 2 2 91 3R 12256832 12256850 GATGGGAAGGATCTTTGGC 58 12256905 12257013 TGTACAGAGACACAGTGGG 58 NA Drosophila melanogaster 61 CG5903 FBgn0038400 FBtr0083281 2 1 1 232 3R 11972263 11972281 GCAACGATGGGAATCATGG 59 11971986 11972004 TATCCAGACTGCACCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Hmt-1 FBgn0038376 FBtr0083188 2 1 1 80 3R 11681651 11681733 ATCGCAAGAAGTTGGTTGAC 59 11681590 11681609 ACAATGCCACATAGATCAGC 58 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 1 2 2 66 3R 11170641 11170659 TAAGGTCGACATAGCGGTG 59 11170528 11170611 AATGGAGTAGGCAACGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4338 FBgn0038313 FBtr0083066 3 1 1 60 3R 11101354 11101372 GGCAAAGGAAAGAAGGGTG 59 11101393 11101414 CACAATTGTGATTCGCTTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tefu FBgn0045035 FBtr0110874 2 1 1 80 3R 11064095 11064169 GAAGGCTAACTGAAAGGGAG 58 11064034 11064054 GTCTGATAAGATCACGCACTG 59 NA Drosophila melanogaster 61 CycC FBgn0004597 FBtr0083010 3 1 1 85 3R 10715119 10715199 CTTACCAGATCGCTATAGCCT 59 10715054 10715074 ATTCAATTCTGCGAACCACTG 59 NA Drosophila melanogaster 61 CG14852 FBgn0038242 FBtr0082957 1 1 1 89 3R 10391760 10391778 CACAACGCCTACTGATGGA 59 10391831 10391849 GTGTTGCTTCCATCAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082932 1 1 2 95 3R 10152898 10152985 AGGAATCTTTCACGGTCGG 59 10153043 10153062 CATCTGCCGAACTTGATCAG 59 NA InUTR Drosophila melanogaster 61 CG14355 FBgn0038208 FBtr0082907 1 1 1 85 3R 9976930 9977029 ATGTGCATTGCTGATGAGC 59 9976863 9976887 CCCATTACGAACATAATATCCTGTG 59 NA Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 3 2 2 93 3R 9945943 9946018 TCATTGAGAAGGTGGTAGCC 59 9945869 9945887 TTCTTGAGCACGTACAGCA 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0082846,FBtr0112939,FBtr0082847,FBtr0112938 1 5 5 80 3R 9523861 9523881 CTGAGCTCAAACACCTTAACG 59 9523749 9523819 ATTATCGTGCAGCGTAAGC 58 NA Drosophila melanogaster 61 CG8476 FBgn0038127 FBtr0082781 1 1 1 60 3R 9045846 9045864 AAATCTCCGCAAGAATCCA 57 9045804 9045822 GATACTGTGACCAAACCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11656 FBgn0038109 FBtr0082698 3 1 1 131 3R 8835795 8835893 ATTATCTCAAGAGGCTGCTG 57 8835986 8836005 TTCTTCTTGGAACTCCTCGA 58 NA Drosophila melanogaster 61 CG17404 FBgn0038001 FBtr0302311 1 1 1 80 3R 8050704 8050725 GGGTCTAACTGAACAACTACTG 58 8050582 8050664 CTGGGTTGACGAGAATTCAG 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 2 3 3 83 3R 7778413 7778432 GATGAAGATGAGCGTCAAGC 59 7778477 7778557 TATGCGAGCTTTCAACTCCT 59 NA Drosophila melanogaster 61 Fer3 FBgn0037937 FBtr0082435 3 1 1 72 3R 7519832 7519850 ATACCAAGAGCTCATCGCC 59 7519712 7519731 CAAAGGAGTTACTTGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5281 FBgn0037902 FBtr0082391 3 1 1 213 3R 7261590 7261608 TTTCCGGAATCTCCATTCG 57 7261785 7261864 CAAAGTTTCAGCATCCTGC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14695 FBgn0037850 FBtr0082335 3 1 1 60 3R 6704806 6704825 CAAGTGGATAAGTCTGCTCG 58 6704765 6704783 TCCGAACAATATACGACCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14689 FBgn0037826 FBtr0082317 2 1 1 60 3R 6536377 6536397 CTATCTCAGTCAGTATCGCCT 58 6536337 6536356 CTCTCCCTTCAGAATCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12818 FBgn0037809 FBtr0082230 1 1 1 158 3R 6157512 6157588 AATTTGCTGAAAGCGAGGC 59 6157710 6157728 TAGTGGTCTTCACTCTCGC 58 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090033,FBtr0090032 1 4 4 80 3R 6117705 6117723 CACAAGCACAAGATCTGCC 59 6117765 6117846 ATCAGCAATCTTAGCATTGCC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 3 9 9 81 3R 5845282 5845303 AGTTTATTCCCGAACTCAAGGA 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 CG9459 FBgn0037764 FBtr0082153 1 1 1 60 3R 5643876 5643896 GTGCAAATCGCATACAATGTC 59 5643769 5643787 CAGGACCAAGCATGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213 3 1 2 91 3R 5608122 5608140 ATGGGCGTAGGAGATACTG 58 5608190 5608272 GTACTCTGTAAGATAGTCGAAGGA 59 NA Drosophila melanogaster 61 CG34117 FBgn0083953 FBtr0110817 2 1 1 226 3R 5225750 5225768 GTTGAGAACAGCTGTTCGG 59 5225486 5225504 GTTTGACCCAGGAAAGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16733 FBgn0037665 FBtr0081974 3 1 1 61 3R 5077905 5077923 ATCGATCATCACGAGACGG 59 5078092 5078110 AGATTGCGAACCAGATCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG16733 FBgn0037665 FBtr0081974 2 1 1 60 3R 5077897 5077917 TGTTTAGCATCGATCATCACG 59 5078083 5078101 ACCAGATCCACGGTATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 2 3 3 96 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064805 5064823 GTTCAGGTTGACGGATCCA 59 NA Drosophila melanogaster 61 Ada FBgn0037661 FBtr0081971 2 1 1 60 3R 4891301 4891321 TCGTGATCGATGCAATTAAGG 59 4891340 4891361 AGTAGCTTGACTGTTATCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081932 1 1 2 150 3R 4645735 4645753 ACGCTTGTCGAAATATCGA 57 4644939 4644958 TCTTCGCTGATTTAACTGCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tcp-1eta FBgn0037632 FBtr0081918 2 1 1 112 3R 4628713 4628804 TCAACCTCTTCCAAGGCTG 59 4628878 4628898 GATCATAATTGCGTCGTGGAG 59 NA Drosophila melanogaster 61 CG8236 FBgn0037626 FBtr0081916 2 1 1 109 3R 4595633 4595653 AGGACATCTACATCAGAGACG 58 4595724 4595805 AATTTCAAGGAGCACGTGG 58 NA Drosophila melanogaster 61 CG8223 FBgn0037624 FBtr0081915 2 1 1 80 3R 4578770 4578788 TGAGGTTCAGACTGAGCTG 59 4578829 4578912 AGTGCTTTCTCATAATCTTCGC 59 NA Drosophila melanogaster 61 CG8159 FBgn0037619 FBtr0301194 2 1 1 92 3R 4553686 4553764 CTGTTCAGATGTGAGCTGTG 59 4553816 4553837 CTCCAAGTTGTGCTTATGAGTG 59 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543,FBtr0300544 1 3 3 80 3R 4544078 4545529 GAGGACTTTCAACAAGGCTG 59 4545572 4545590 CAGTAGATAGGAGACGCCC 58 NA InUTR Drosophila melanogaster 61 Cenp-C FBgn0086697 FBtr0089973 3 1 1 81 3R 4393445 4393534 AAATACTACCGGTATTCGGAG 57 4393577 4393595 CTTGCTAGGATCCATGGTG 57 NA Drosophila melanogaster 61 Or85d FBgn0037594 FBtr0081872 2 1 1 88 3R 4379494 4379515 GATTATTAAGAGGGCCCAACAG 59 4379564 4379643 GTTGCAAGAGATCCGACAC 58 NA Drosophila melanogaster 61 CG9684 FBgn0037583 FBtr0081853 2 1 1 83 3R 4187678 4187699 CAGTAATCGTTGCTATATTCGC 57 4187390 4187637 GCTATGGTATTAACCTTCTTGC 57 NA Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0302178,FBtr0300896 1 2 2 60 3R 4046638 4046657 CGCTAAACCTTACCAATGTG 57 4046677 4046698 ACTAAACTGCTAAGACTACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7918 FBgn0037546 FBtr0081789 3 1 1 80 3R 3908805 3908823 TGGACAGGAATATTCGGCA 58 3908866 3908953 TCGAAACGGTTCCTATTAGC 57 NA Drosophila melanogaster 61 CG11035 FBgn0037544 FBtr0081816 2 1 1 60 3R 3858441 3858459 CAGGAACCAAGGAAGTGAG 57 3858399 3858420 CTCATAAGCCTGATTGATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CD98hc FBgn0037533 FBtr0081824 2 1 1 80 3R 3800908 3800926 AAGACTGCATCCTACATGC 57 3800575 3800864 TCCAGACTTGATCCTGGAG 58 NA Drosophila melanogaster 61 alpha-Est5 FBgn0261393 FBtr0081547 3 1 1 84 3R 3361245 3361462 TTGTTTGGGATTCCTATCGCT 59 3361181 3361200 CTTGAGAGCTAGCACTTGGT 59 NA Drosophila melanogaster 61 CG10032 FBgn0037493 FBtr0081579 1 1 1 77 3R 3097871 3097889 AACAGGAGGTGATGGTCTG 59 3098035 3098053 CAGACAACCGTAAACTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2656 FBgn0037478 FBtr0081568 2 1 1 123 3R 2971292 2976781 TGAGGATTTCAGTTTGGTGAG 58 2976866 2976884 CTTAACGTTCACGTCTGCA 58 NA Drosophila melanogaster 61 e(y)2b FBgn0040670 FBtr0081562 1 1 1 88 3R 2920109 2920196 CAAATAGTCCCGCAAGCTC 59 2920248 2920266 CACTACTTATCGAGGGCGG 59 NA InUTR Drosophila melanogaster 61 CG1105 FBgn0037465 FBtr0081645 3 1 1 91 3R 2890484 2890610 TCCTAATATACCGCCACCG 58 2890411 2890429 CGATCATCTGCGTATGCTC 58 NA Drosophila melanogaster 61 dj FBgn0019828 FBtr0089741 2 1 2 60 3R 2885193 2885292 TCCTTGAGAACTTTAAGGAAGG 57 2885313 2885331 GCGGATCGTGAATAGAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34297 FBgn0085326 FBtr0112493 3 1 1 82 3R 2573014 2573099 TGTTTCATCAAATCGGGCA 58 2572950 2572968 CTCAGGTTCTTCTCGTCCA 58 NA Drosophila melanogaster 61 CG15177 FBgn0037461 FBtr0081700 2 1 1 103 3R 2454625 2454644 ATACCAAGTACGTGAGTCCC 59 2454486 2454562 GGTGTCATAAACTTCAAAGGCA 59 NA Drosophila melanogaster 61 CG33324 FBgn0053324 FBtr0081727 2 1 1 116 3R 2272033 2272195 AGTGTATCACGATGTTATTGCC 59 2272272 2272290 CTTCGCCTGGTCTTATCCA 59 NA DesignRelaxed Drosophila melanogaster 61 TfIIFalpha FBgn0010282 FBtr0081719 1 1 1 136 3R 2207320 2207415 AGTGAAGACGAACCAGATCC 59 2207514 2207532 TCCTTGTCCGACTCATCAG 58 NA Drosophila melanogaster 61 Osi12 FBgn0037419 FBtr0078602 3 1 1 133 3R 2104892 2107120 GACTAGAGGAAGGTCGTGG 58 2107216 2107235 GATAATCAGTGCCTTGCCTG 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 1 5 5 85 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 CG1347 FBgn0037363 FBtr0078716 2 1 1 88 3R 1502275 1503001 ATGAGAAGCTCTGCCTACG 59 1503053 1503071 AAGGCGATAGATCGGTGAC 59 NA Drosophila melanogaster 61 CG18271 FBgn0037263 FBtr0301296 3 1 1 99 3R 467720 469273 GAACTCCTACGACCCACAG 59 469336 469354 CAAGCTCTGACTGCATAGC 58 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078942,FBtr0078939 3 3 4 81 3R 272537 273434 ACTCACATAGTGACTCGAGG 58 272475 272493 ACATATGTGAGGCAAACGG 58 NA Drosophila melanogaster 61 hkb FBgn0261434 FBtr0078951 2 1 1 140 3R 171666 171684 AGTTAAAGGCGCTCAACAG 58 171479 171497 TCACGTCGCACTTAAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14644 FBgn0250821 FBtr0078981 3 1 1 91 3R 78084 78102 AAGGAGTACCTCTCCAACC 58 77956 78029 ATCTCCTTGATCTCGACCC 58 NA Drosophila melanogaster 61 TwdlF FBgn0037224 FBtr0078975 3 1 1 101 3R 72795 72874 GTTGTTCTAATGTGCCTGGTG 59 72937 72955 CAGAGGACGAAGATTGCCA 59 NA Drosophila melanogaster 61 pncr011:3L FBgn0083068 FBtr0091958 1 1 1 101 3L 11090148 11091196 GGACGTTTACGACGTTCTC 58 11091261 11091279 TTCTTCTGCATTTCCGTCC 58 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 2 2 2 144 3L 22056139 22056786 AAGGTTGCATACAGGTCTG 57 22056892 22056912 TCCTCAATGAACTGGTTAACC 58 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 3 2 2 69 3L 21807940 21809379 CATGTGAAGGCTGCAAGTC 59 21809412 21809430 TGCTTACATCCTGCAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 1 2 2 67 3L 21807940 21809379 CATGTGAAGGCTGCAAGTC 59 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr78E FBgn0037114 FBtr0078463 1 1 1 138 3L 21659967 21660053 TTTAAGATTCTCATCGTCGCC 58 21659849 21659867 TGTACGATCCATCCTCGTG 59 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 2 2 2 87 3L 21605211 21605229 ATAGCCGAAGTACAGCGTC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 pzg FBgn0259785 FBtr0078336 2 1 1 137 3L 21280139 21280157 TCCACGTAAACTCCTGCAG 59 21280317 21280336 TTATAGTCACACGAGGTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Ilk FBgn0028427 FBtr0078305 1 1 1 80 3L 21210241 21210674 CAACAATTTGGGAGACGACC 59 21210717 21210735 AGAGTCTCCACAAGCTTGG 59 NA Drosophila melanogaster 61 CG11037 FBgn0037038 FBtr0078334 2 1 1 83 3L 20953861 20953881 GTGACAGTGCCAATTATTCAC 57 20953722 20953741 AGCACATATCATACTGTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10588 FBgn0037037 FBtr0078284 1 1 1 60 3L 20953015 20953036 CAAACATCAAATTCAACAGCCC 59 20953051 20953075 CGTCTAATAAGTCACTCAAAGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fng FBgn0011591 FBtr0078267 3 1 1 82 3L 20936715 20936734 CGACGAAGAACTATCACGAC 58 20929803 20936670 GAAGAACCAGGTCTGATCG 57 NA Drosophila melanogaster 61 CG11399 FBgn0037021 FBtr0078277 3 1 1 105 3L 20775761 20775781 GTTCCTTCCAAGTAAACCCTC 58 20775611 20775695 ACAATAAAGCTCAGAGGCTC 57 NA Drosophila melanogaster 61 CG4289 FBgn0037020 FBtr0078251 3 1 1 92 3L 20772136 20772213 AATCGCTGATAACCACTGC 58 20772269 20772287 CTTTGGACCGTAGGAACTG 57 NA Drosophila melanogaster 61 CG6020 FBgn0037001 FBtr0078201 1 1 1 99 3L 20489163 20489263 AGAGGATCGCTAGGATTGC 59 20489326 20489344 CCCTTGACGTACAGATCCT 58 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074851,FBtr0074850 3 2 3 124 3L 20228121 20228139 GATCTCGTGAACGATTGGC 59 20227955 20228033 TTCCAAGAGGCGTACTTCG 59 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 1 2 2 83 3L 20221373 20221391 GTTTCACGATCTCCATGCC 59 20221438 20221528 AGGTACACATCGCTAGGTC 58 NA Drosophila melanogaster 61 Ir76b FBgn0036937 FBtr0074869 2 1 1 80 3L 20103997 20104086 TAAACAGCAGTACGGTGGA 58 20103935 20103955 TTGTGGAGTAGTAGACGAAGC 59 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 1 3 3 80 3L 19992279 19992404 AAGAGCATCTTCATATGGTACC 57 19992220 19992240 AATCATGCAGGAGTTCTTCTC 58 NA Drosophila melanogaster 61 CG42655 FBgn0261507 FBtr0302432 2 1 1 117 3L 19946697 19946718 GAATTGGATGCACAGTTATAGC 57 19946501 19946568 AGATTAAACCAGTCCGACG 57 NA Drosophila melanogaster 61 CG32206 FBgn0052206 FBtr0089796 2 1 1 81 3L 19338802 19340984 TGTTCATGAACAAACCCATCAG 59 19338742 19338760 ATCTCGAGCCACGTAAAGG 59 NA Drosophila melanogaster 61 CG3893 FBgn0036826 FBtr0075075 1 1 1 60 3L 18894429 18894447 CCATTTGATACCAGAGCCC 58 18894319 18894337 AATGTTTCGATCCTCGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 RpL26 FBgn0036825 FBtr0075066 2 1 1 207 3L 18892176 18892194 CTCTTTGCCATCCCTAACC 57 18892531 18892549 CATTGTACTTCTGGCGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpS26 FBgn0036774 FBtr0075121 2 1 1 60 3L 18099945 18099964 CTCATGAGGCTACACAACCA 59 18100083 18100101 CCCTTAGAAACTGACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 3 3 3 87 3L 17873842 17873860 CTTCGATCGTCACTTGGGA 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0302510 3 1 3 80 3L 17467923 17468031 ATTACGGCAAAGGTTCAAGTC 59 17468073 17468091 TGGACAGAAGCTAAGTGCA 59 NA InUTR Drosophila melanogaster 61 Rh4 FBgn0003250 FBtr0075338 1 1 1 70 3L 16854986 16855004 GTTCTGGGATCGATTCGTG 58 16846292 16846313 CAAAGTTGTCCGAAAGATAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 nudC FBgn0021768 FBtr0075328 2 1 1 87 3L 16802381 16802399 GTAAGCTGATGCCGAATGC 59 16802450 16812017 GGAATCTTGAGCTCCACCT 59 NA Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 3 1 1 79 3L 16719154 16719234 TACCCTCATCATGAAGAGCC 59 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mo25 FBgn0017572 FBtr0075358 1 1 1 60 3L 16607331 16607349 CAACTTCCATACGGATCGC 58 16607289 16607308 GATCAGATAGGCCTTCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32165 FBgn0042178 FBtr0075312 3 1 1 150 3L 16589997 16590015 CTTCGATTCGGGTTCAGGT 59 16590127 16590203 TAATCATCGTCACCTTCCTCG 59 NA Drosophila melanogaster 61 Cpr72Ea FBgn0036617 FBtr0075382 3 1 1 60 3L 16356079 16356099 GTCGCTAGAATTTAGTCCCAG 58 16356121 16356139 GTGATGCTCAACATGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33795 FBgn0053795 FBtr0091799 1 1 1 106 3L 16164346 16164427 GAGATTAAGTCAGTATTCTGTCACC 59 16164264 16164282 GATTGACAGCCTTCAAGCG 59 NA Drosophila melanogaster 61 CG17029 FBgn0036551 FBtr0075514 2 1 1 80 3L 15970585 15970603 TATTCTCCGCCTACAAGGG 58 15970647 15971064 CTTGCTTGATCGTCGTCAC 59 NA Drosophila melanogaster 61 CG17032 FBgn0036547 FBtr0075511 2 1 1 118 3L 15952475 15952797 ATGATTTGCCTTCCAAGGG 58 15952878 15952897 GGATATTTGATCCAGGACCG 57 NA Drosophila melanogaster 61 CG7579 FBgn0036528 FBtr0075581 2 1 1 80 3L 15676328 15676346 TACAATGCCTGGCTATCAG 57 15676212 15676286 GTTGATCTTGAGACATTGTGG 57 NA Drosophila melanogaster 61 CG7804 FBgn0036496 FBtr0075617 2 1 1 192 3L 15466736 15466817 GTGTGAATCGAATTCACATCAG 58 15466565 15466583 GCTAGATTCCGGAAACTGC 58 NA InUTR Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075633,FBtr0075632 3 2 2 60 3L 15090443 15090461 GGATGAGATTGCCATACCC 57 15090485 15090503 ATGCGGTTCCTTTAGAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13473 FBgn0036442 FBtr0075689 2 1 1 60 3L 14722119 14722139 GTTGGTCCTTAAGATTGACGT 58 14722160 14722179 GTTGACTTCGTACTGAACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075680,FBtr0075679 2 2 2 84 3L 14660500 14660578 GAAGAAGGTCCTCAATGTGC 59 14660625 14660643 ATATCCCTTGCAAGCACCA 59 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 1 2 2 83 3L 14583157 14583175 CAAACCAAGTATCTGGCCG 58 14577189 14583110 GAACCAGACCTTAACCTGC 58 NA Drosophila melanogaster 61 CG10713 FBgn0036360 FBtr0075855 1 1 1 101 3L 13427911 13427929 CATCAACGTGCCAATAGGC 59 13424050 13427846 AAATGTAAGTTGCGCTGCA 59 NA InUTR Drosophila melanogaster 61 CG14105 FBgn0036359 FBtr0075857 3 1 1 102 3L 13419261 13419282 AGGTGTCCTTTATCGTAAACTG 58 13419125 13419198 TTCCACCAACTGTTCTCTG 57 NA Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 2 2 2 108 3L 13407233 13407440 TATATTGCATCTGGTGACGC 58 13407511 13407529 TATCCTTGATGGGTCCTGC 58 NA Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075865 3 1 2 80 3L 13380813 13380831 CGATCTCGCTGTTCATGTG 59 13380696 13380769 ACTCTGTCGGATAACCCTC 58 NA Drosophila melanogaster 61 CG14110 FBgn0036352 FBtr0075844 2 1 1 104 3L 13377965 13378036 CTGAGTGCAGTTGTTCTCAC 59 13378103 13378121 TTTACGGGAACGAGACTCC 59 NA Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 3 1 1 61 3L 13003068 13003086 TACGGAGCAGGAATTGGTG 59 13002953 13003043 TTAATGCCTCTTGGAGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 3 3 3 90 3L 12788109 12788128 GATTACAAATCCGCCCATCG 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG10627 FBgn0036298 FBtr0075967 3 1 1 104 3L 12520976 12520994 GTGGTGGCGAAATACAAGC 59 12520821 12520910 ATTATCGGTGTCCTCTTTGGT 59 NA Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 2 1 1 170 3L 11822660 11822734 GCTCGACCTAGAAATGCTG 58 11822868 11822886 TTAAGATCCGAGTCCACCA 57 NA DesignNoJunction Drosophila melanogaster 61 chrb FBgn0036165 FBtr0076093 1 1 1 100 3L 11487746 11487764 GATCATCCGGATGTCGGAG 59 11487828 11487959 AGTATGCAATGCGCTTGAC 59 NA Nonspecific Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076169,FBtr0076168 3 2 2 60 3L 11247416 11247435 GTTCATGAAGAGTTTGGCCC 59 11247455 11247476 ATTCTTGGTGATCGTATACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6463 FBgn0047038 FBtr0076276 3 1 1 81 3L 10686961 10687109 GATCATTAAGGCGTCCACAG 58 10686899 10686917 CTTGCCATACAGAGCACTC 58 NA Drosophila melanogaster 61 Ir67b FBgn0036083 FBtr0076294 1 1 1 60 3L 10424811 10424829 AGATGAACACCTGGATCGT 58 10424769 10424789 GTGATGATATTCCCACAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6749 FBgn0036040 FBtr0076410 2 1 1 80 3L 9725534 9726048 AACTGATACAGTTGGACGTG 58 9725473 9725491 AGCTCAATCTATTCCCGCT 58 NA Drosophila melanogaster 61 CG6749 FBgn0036040 FBtr0076410 1 1 1 80 3L 9725537 9726053 CAATCAACTGATACAGTTGGAC 57 9725478 9725497 AATCTATTCCCGCTTAGCTG 57 NA Drosophila melanogaster 61 Or67b FBgn0036019 FBtr0076420 3 1 1 80 3L 9622090 9622171 GAAATACTGTCGATTAACTCGC 57 9622031 9622050 TCCATAATAAAGGCGACGAG 57 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113322 1 1 5 80 3L 9424369 9424389 ACTGGAAACAGCATCTCTAGG 59 9424429 9427014 GTACTCATCCACATAGCTCGT 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 1 4 5 108 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586649 8586667 GTAAGTCGATGTCCATGGG 57 NA Drosophila melanogaster 61 Gr66a FBgn0035870 FBtr0300280 3 1 1 133 3L 8299940 8299958 GGAGAAATCCCGTAATGGC 58 8299764 8299843 CGAAAGTCAAGGTGCTCTG 58 NA Drosophila melanogaster 61 Sbp2 FBgn0087039 FBtr0076707 2 1 1 126 3L 8297670 8297688 GAATGCTATTCCGCTGGAG 58 8297775 8297857 GTCACAATAGCTTCTAAATCGC 58 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076697 1 1 2 153 3L 8195960 8196043 TGAAATTCATCGCCGTCTG 58 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA Nonspecific Drosophila melanogaster 61 RNaseX25 FBgn0010406 FBtr0076752 1 1 1 80 3L 7963778 7963796 CAGCGGTTTCTATTCGTGG 59 7963838 7964057 CGAATACGATATGTCGCTGAG 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 1 7 7 93 3L 7811234 7811252 AATGTTGAGGCGCAAACAG 59 7810753 7811178 GGTCGGCATATTGTGTTACC 59 NA Drosophila melanogaster 61 PGRP-SD FBgn0035806 FBtr0076807 3 1 1 60 3L 7644755 7644775 GTGGAGGGCTATAAGTTACTG 57 7644797 7644815 CTTCTCCAGGACTCTTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850,FBtr0301611 3 3 3 81 3L 7375097 7375319 ATCCGAGTAAAGAAGTATCTGGAG 59 7375359 7375377 TTTGCATCAACTCCCTGGT 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850,FBtr0301611 2 3 3 80 3L 7375098 7375319 TCCGAGTAAAGAAGTATCTGGAG 59 7375359 7375377 TTTGCATCAACTCCCTGGT 59 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690,FBtr0076839 2 2 2 60 3L 7323294 7323316 CGTCATAAACTGCAGAAGTATGG 59 7323330 7323413 CCAGAGATTTATAATCTTCCTTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 zpg FBgn0024177 FBtr0076983 2 1 1 81 3L 6598776 6598795 CCTATGTGAGCGACAATGTG 59 6598658 6598735 ACTACCTTACTAACCGCATCTG 59 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 2 3 3 80 3L 6190639 6190719 GCATCAGATGATACAGAAGATTCTG 59 6190756 6190775 AATTGCTCCACAAATCGACG 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 1 6 6 60 3L 5765472 5765548 GAAGGTATCTGCCACAAAGC 59 5765569 5765589 CTGTATACAAAGCGTGATTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Sse FBgn0035627 FBtr0077125 2 1 1 81 3L 5653887 5653961 GTAGTCGATGAGCGTCTAGAC 59 5653826 5653844 AATGCAGTGATTTGACGCG 59 NA Drosophila melanogaster 61 spo FBgn0003486 FBtr0077130 1 1 1 60 3L 5584355 5584375 ACACGATTATCTTCATGCTGG 58 5584315 5584333 ACTAGATTTCCAACCGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Srp54k FBgn0010747 FBtr0077169 2 1 1 80 3L 5146852 5146960 CTGATAGATAAGGTAAACGAGCTG 59 5146999 5147017 GATGGTGAAATGACCGTGC 59 NA Drosophila melanogaster 61 CG7509 FBgn0035575 FBtr0073362 2 1 1 80 3L 4804632 4804711 ATGGTCAACATAGATCTTTCGC 59 4804573 4804593 CTCTTTAAGCACGGTTAGTCC 58 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 3 3 3 150 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552226 4552247 TCGTCTACCCAGAAGTATTTGG 59 NA Drosophila melanogaster 61 CG32241 FBgn0052241 FBtr0073330 3 1 1 113 3L 4466462 4466791 CAAACCAAGCAGAAATTCCTG 58 4466369 4466388 CGCATAGTGGTATCCATCCT 59 NA Drosophila melanogaster 61 CG33764 FBgn0053764 FBtr0091765 1 1 1 97 3L 4267160 4267243 TAGCAAAGTAAAGGTGCGT 57 4267081 4267099 ATGTTAGGAATCTGCACGC 58 NA Drosophila melanogaster 61 pav FBgn0011692 FBtr0073227 2 1 1 84 3L 4244296 4244380 GGACTATGATGAGAATATGCAAGTG 59 4244422 4244440 TTGCTTCATAGGAGTCGCC 59 NA Drosophila melanogaster 61 CG14969 FBgn0035440 FBtr0073082 2 1 1 80 3L 3333917 3333993 GCAGGACAATATGAACCGG 58 3333855 3333874 AAATTGGTCAGCTTCACCTC 58 NA Drosophila melanogaster 61 CG9970 FBgn0035380 FBtr0073010 1 1 1 60 3L 2916370 2916389 TACCCACGGTTAAGATGGAC 59 2916329 2916347 GTCTTCCACAAGAGTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 3 2 2 107 3L 2783377 2783395 CTTGGAGAAGCGAATGTCC 58 2783466 2783747 TTCTTGCGACATAGAGGGT 58 NA Drosophila melanogaster 61 CG2034 FBgn0015359 FBtr0072877 2 1 1 152 3L 2257795 2257886 CGTAATAGATGAGCTAAATCGGG 59 2257998 2258016 TACTTGTCGATCAGTGCCT 58 NA Drosophila melanogaster 61 CG15878 FBgn0035316 FBtr0072911 3 1 1 60 3L 2211707 2211725 ATGATCGGATGCTTCACAC 58 2211665 2211686 GATTCATCAACCAGAAAGTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 R FBgn0004636 FBtr0072867 1 1 1 195 3L 1861666 1862068 AAGCATAGTGTGCTCTCGG 59 1861489 1861508 CTTTGTGCCGTGTAAGTGAC 59 NA InUTR Drosophila melanogaster 61 CG12020 FBgn0035273 FBtr0072778 1 1 1 89 3L 1798303 1798321 CAACAAGAAGGTGGAGCAG 58 1798433 1798456 GTGATATGCTTCATATGTGGAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 2 2 2 80 3L 1749639 1749721 GACCGAGTGGATAAGGAAGG 59 1749762 1749782 GGAATAGAGGGATCCATGGAC 59 NA Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 1 2 2 140 3L 1307716 1307734 AGATCCCTTTGCAGGACAC 59 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072642 2 1 2 68 3L 1040331 1040349 AATGATGGAGAACTCGCAC 57 1040208 1040299 TACTGGTAGCTGTCTGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 2 3 3 114 3L 679819 679906 AGAATTTAGCGACCTGGCA 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 CG3402 FBgn0035148 FBtr0072559 3 1 1 83 3L 652265 652453 CACGGATTATGGCATCTATGTG 59 652203 652221 AGGATCTTGTCGTGGATCC 58 NA Drosophila melanogaster 61 CG34269 FBgn0085298 FBtr0112464 3 1 1 60 3L 528823 528843 CATGTGGAATCGAATGGACAG 59 528865 528883 TGCCATCATAGCCAGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 1 3 3 83 3L 201358 201448 GTATTGTCAGACCGTGCAC 59 201495 201513 TTCATCACCTGTTTGGCCA 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864,FBtr0301889,FBtr0072474 2 3 6 112 3L 168747 168765 CGGTATCGTCCTCAAACTC 57 168841 172069 TGTGATTACCTTTGTCGGC 58 NA Drosophila melanogaster 61 snoRNA:Or-CD1 FBgn0086027 FBtr0114303 3 1 1 66 2R 18084853 18084871 GACGATTGGGTTCGATCTC 58 18084805 18084825 GTCGTAACATATTGGTTGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33438 FBgn0053438 FBtr0086430 1 1 1 60 2R 15622371 15622389 ATACATCGGTTCTCGTCCG 59 15622329 15622347 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34214 FBgn0085243 FBtr0112407 2 1 1 80 2R 20553347 20553429 TCCTTACATAAATCCTCTGTACCC 59 20553290 20553309 CGCACTTGGATAATCGATCC 59 NA Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 3 2 2 81 2R 20447024 20447042 GGAGGCCGAGAAGATACTG 59 20446639 20446980 GAAATGCCAAGTGTCGACTG 59 NA Drosophila melanogaster 61 Ir60e FBgn0035019 FBtr0273359 1 1 1 60 2R 20418424 20418443 TAGTGTTCCTGAGCAATGAG 57 20418383 20418401 AAGCAGTAGGTGTAGAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ssl FBgn0015300 FBtr0072351 3 1 1 80 2R 20387170 20387191 GCATATGTTCTTTATGCAGCTG 58 20387051 20387129 TGGAAGCCATAGATACGGG 58 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 1 2 2 84 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299756 20299774 CAGAACGATTGACCTCACC 58 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 3 2 2 106 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183365 20183441 GCTGGAAAGCCTTTAGGTC 58 NA Drosophila melanogaster 61 CG13577 FBgn0034998 FBtr0300366 1 1 1 60 2R 20156276 20156294 TGCCTTCTCTGCTACTCTC 58 20156234 20156256 GCTCTCATATTATTCCAAGTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0100585 3 1 2 61 2R 19951054 19951072 GTACGATCCCACCATCGAG 59 19951094 19951115 GCCCATACAATGTACATACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL39 FBgn0023170 FBtr0072185 1 1 1 81 2R 19949771 19949789 GGCTAAGAAGCTGAAGCAG 58 19949503 19949729 CTTAGCGTTGTAACGAATAGTG 57 NA Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 1 1 1 77 2R 18964558 18964631 CAGCATTGAGCTCAAGCAC 59 18964499 18964518 CTATTGTCCTCCACCAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30187 FBgn0050187 FBtr0301927 1 1 1 80 2R 18805923 18805999 CAAGACGTCCAATCAGTGAG 58 18805862 18805881 CACTACTGCTGTTATGACGT 57 NA Drosophila melanogaster 61 Obp58c FBgn0034769 FBtr0071920 3 1 1 294 2R 18594059 18594133 CCTGATTTGGTTTGCTGGT 58 18593783 18593804 CCTTTCAGTGAACAAACTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG30269 FBgn0050269 FBtr0071867 3 1 1 91 2R 18555813 18556164 CTGTTCCAGTTGTACTGCT 57 18556219 18556237 AAATAACGATCGCACATGC 57 NA Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071940 2 1 2 81 2R 18499317 18499384 TCATCATGACTGCCTCCAG 59 18499254 18499273 TGAAATTTGCGAACCAGCTC 59 NA Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 2 2 2 86 2R 18079226 18079244 ACTTCCCAGGTCCTTACTG 58 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 CG6758 FBgn0034704 FBtr0071767 1 1 1 80 2R 18064198 18064218 ATTTAGCTCTAAGGTGTCGTG 57 18064260 18064335 CCATTCGAAAGGGATCCTC 57 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071718 3 1 2 80 2R 17691064 17691130 TTGGACAATTTGCAGGTCG 59 17691174 17691192 GCGTCTTTGGTATTCCTCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 1 3 3 82 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608822 17609371 CGATGATACCTCGGAAACCT 59 NA Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666 1 1 2 96 2R 17557771 17557789 AATACAACGCACGCTTTCC 59 17558056 17558074 GAGATGATAACAGGCACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 2 2 2 285 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556708 17556726 TTCCATGCCTTAGCTTAGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 1 2 2 80 2R 17375565 17375584 CACCACCAATGTGTTCAAGG 59 17375331 17375526 TTCTTTAGATACTCGCTGACCTC 59 NA Drosophila melanogaster 61 Acox57D-d FBgn0034629 FBtr0071607 3 1 1 136 2R 17277603 17277623 TCAACCATGAGTACATGTCCC 59 17277721 17277800 GAATAGTCCTCCAGGCCAG 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 1 3 3 80 2R 17172237 17172255 TCTATCAGATGTGAGCGGA 57 17172298 17172373 TGATACATCAGCAGAATGGG 57 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0089602 2 1 3 174 2R 17099824 17099843 GTGAAGACCGTTTACGATCC 58 17099980 17100065 TGATGGTCACTTCCTCCTC 58 NA Drosophila melanogaster 61 shg FBgn0003391 FBtr0071546 1 1 1 100 2R 16943409 16943427 CATCGAGGACATCAACGAC 58 16942183 16942201 TGATAGTCATCACCACCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13438 FBgn0034545 FBtr0086237 2 1 1 63 2R 16580421 16580439 TAGCAAGCTTTACTGTCGG 57 16580543 16580561 TCCCTTCCTGTCAATGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 2 2 2 94 2R 16231426 16231450 CACACTGAAGATCAATAATGAGGAC 60 16231500 16231578 CCTTTCTAATACGATTGCGGG 59 NA Drosophila melanogaster 61 CG10474 FBgn0034427 FBtr0086561 1 1 1 60 2R 15173424 15173442 CTGCCTATGCGGATAACGA 59 15173382 15173402 ATAAGGATGTCTCCATCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14505 FBgn0034327 FBtr0110803 3 1 1 81 2R 14191142 14191162 TGTATGGCGAGAAATATGGCT 59 14191004 14191104 CAATCAAGTCATTTACCTCAGGAC 59 NA InUTR Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 2 2 2 67 2R 14055634 14055721 AGCGTTTCAAATCCTTCGT 58 14055752 14055770 CTTCTTCACTCCCTCCAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17680 FBgn0062440 FBtr0086781 2 1 1 74 2R 14035350 14035368 CACTTCCCATTAGCCTTGC 58 14035294 14035313 GCAGGATCCTTAGGTTATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 3 1 1 65 2R 13936051 13936125 GGCTAAGTTACAGTTGGCG 58 13936154 13936172 AGGATTAAAGCCTGCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 olf186-M FBgn0015522 FBtr0086799 2 1 1 60 2R 13735641 13735662 ATTCGAGGTCAATCATCATAGG 57 13735679 13735701 CTATTGTATGCTGGGCTTAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14488 FBgn0034278 FBtr0089558 3 1 1 84 2R 13655156 13655175 CTAACGGAATCTCAAGCGAG 58 13655038 13655057 ATAGAAACTGTTCCATGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG42649 FBgn0261501 FBtr0302392 2 1 1 62 2R 13486972 13486990 GATATACACCGAGGCTCCA 58 13486928 13486947 CCTACTTCTTCCAACGAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18467 FBgn0034218 FBtr0086918 3 1 1 81 2R 13329054 13329072 ATCGGATGATGAGCTTCCA 58 13329114 13329190 TCTTGATATCCCTCTGTAACCA 58 NA Drosophila melanogaster 61 CG6421 FBgn0025827 FBtr0087043 2 1 1 71 2R 12759880 12759955 GGTCATGTGCTGGATAAGC 58 12759990 12760008 ATTGCAACCACTAATGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087025 2 1 2 140 2R 12669056 12669680 CTGACTACGATAACGATATTGTGG 59 12669779 12669797 CATCGGCACCAAGATTCTG 59 NA Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0087092,FBtr0113086 3 2 2 60 2R 12423833 12423851 GATCCGCTACTCTATGCCC 59 12423874 12423893 CAGTTCCGATATCGATGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tun FBgn0034046 FBtr0087287 1 1 1 80 2R 11740263 11740281 TTTCACAAGTACGTGACGG 58 11740320 11740405 GGGTATGACTCTAAAGAATCTGTG 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 2 4 4 80 2R 11344304 11350806 TGATATCGAGGAAGAAACGTC 57 11350848 11350866 CTCTTGAGGAGCATCAGTG 57 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087403,FBtr0087402 2 2 2 105 2R 11100179 11100198 ATAAATTCTGCGAGTGGCTG 58 11100042 11100114 GTCACATCCGAATAAATTCCCA 58 NA Drosophila melanogaster 61 pcs FBgn0033988 FBtr0301507 2 1 1 94 2R 10877279 10877297 TAGACCCTACTACGAGGCA 58 10877353 10877436 CATGGATTTCATTAGCTCGCT 58 NA Drosophila melanogaster 61 CG30479 FBgn0050479 FBtr0087479 3 1 1 243 2R 10562433 10562452 AATGTCGGCATCAATATCGG 58 10562209 10562228 GTCAGAGAATAGTGCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087484 1 1 2 80 2R 10527950 10528061 TAGAGAAGGACAACTTAGACCAG 59 10527892 10527914 CAAAGATCTCATAAATCTCCCGG 59 NA Drosophila melanogaster 61 CG30197 FBgn0050197 FBtr0087494 2 1 1 165 2R 10401805 10401823 AAGGTTCAGAACTGTACGC 57 10401952 10402317 TAGCTCCAGAGTTCTTGCT 58 NA Drosophila melanogaster 61 Oaz FBgn0033939 FBtr0113081 1 1 1 80 2R 10349546 10349567 TAAGAAACTGCATACCAACGAG 58 10349607 10349702 ATCTTCAAGTGGTCACTCCT 58 NA Drosophila melanogaster 61 CG8394 FBgn0033911 FBtr0087577 1 1 1 80 2R 10087924 10087945 GTATAGGAACGAGTACCAGAGC 59 10087793 10087883 CTACCTTGCCTAAAGCCGT 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0112795,FBtr0112796,FBtr0290035,FBtr0087528,FBtr0087527,FBtr0290034,FBtr0087529 3 8 8 99 2R 10063957 10063975 ATGTCAAAGGCCTTACAGC 58 10064035 10064125 GTGATAACTCTTTGTGTTCCAG 57 NA Drosophila melanogaster 61 Aats-phe FBgn0020766 FBtr0087594 3 1 1 81 2R 9857094 9857183 ATATGGTGGAGCAGATCAGTC 59 9857225 9857244 TAAACAATGCGGAAGCACAC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100452,FBtr0100453 1 3 3 81 2R 9842482 9842500 CAAGCCAGAAATCGTCTGC 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13343 FBgn0033882 FBtr0087585 1 1 1 60 2R 9746957 9746975 GTTGGATCAATGGCATGCT 58 9746999 9747017 GTATCTATGGTGCCGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12464 FBgn0033861 FBtr0087652 2 1 1 60 2R 9496441 9496460 AACTTTGAACACAACTGCCT 58 9496400 9496418 AATCCGATAGGTGGATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13332 FBgn0033851 FBtr0087674 2 1 1 72 2R 9413130 9413148 CTACAGCGGGATCATCCAG 59 9413184 9413202 ATTTAGCTGACGTTCCAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13330 FBgn0033848 FBtr0087671 1 1 1 199 2R 9402848 9402932 GTATATCGAATCCTTCGCGT 57 9403094 9403112 GCTGAATCTGGGATTGTGG 58 NA Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670,FBtr0301389 1 2 2 60 2R 9396199 9396217 GGGCTATAACAAGGTGCTG 58 9396239 9396259 CAGAATCTGGTGGAACATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699,FBtr0087700 3 2 2 91 2R 9379392 9381771 CCCTGATATTAATCTGTTATAGCCC 58 9379325 9379345 CTGGTAGATGAACAAACCCAG 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 1 8 8 91 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560466 8560484 CGAAACTCGTAAAGTCGGG 58 NA Drosophila melanogaster 61 CG8594 FBgn0033755 FBtr0087826 2 1 1 80 2R 8460382 8460495 CCTTCCTCTACAATTCTGTTAAGG 59 8460532 8460552 AGTAAAGGTAGGGAATCAGCA 58 NA Drosophila melanogaster 61 Cpr49Ab FBgn0050042 FBtr0087914 3 1 1 104 2R 8266446 8266464 CAATCTTCCCAAGGGACGT 59 8266528 8266602 GTTTCCCAAAGATAGTGATAGCC 59 NA Drosophila melanogaster 61 CG18343 FBgn0033683 FBtr0087982 1 1 1 60 2R 8026596 8026614 CTTCGTCATCCGATTGCTG 59 8026633 8026656 GGAATAGCTAACAGATGTGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Ed FBgn0033601 FBtr0088188 3 1 1 111 2R 7149176 7149291 TCGCATTGCTATTGATCTTGAC 59 7149086 7149104 CTAAGTTGTTCGGTCACCG 58 NA Drosophila melanogaster 61 CG9080 FBgn0033593 FBtr0088191 1 1 1 68 2R 7129533 7129551 GATGGCACTGGAGTTAGGG 59 7129483 7129501 TCCACAGCAATATCCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13217 FBgn0033590 FBtr0088194 3 1 1 68 2R 7124094 7124112 TGAAGTTCCTTGCCCTGAG 59 7124044 7124062 AATCCACAGGTATGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13230 FBgn0040764 FBtr0088204 2 1 1 96 2R 7042472 7042491 ATCTGTCTGGTCCTTGTCAG 59 7042547 7042648 TGTAAGCGTCGATTATCTTCTG 58 NA Drosophila melanogaster 61 CG33475 FBgn0053475 FBtr0088318 3 1 1 60 2R 6298439 6298458 TTCCACGGTATTTAGATGCC 57 6298398 6298416 TCTGACACTGTTGCTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 1 3 3 80 2R 6019888 6019908 CCAGAGCTACGAAATAAAGCT 58 6019949 6020268 ATCTTGATCACGCTCTTCAG 57 NA Drosophila melanogaster 61 Mmp2 FBgn0033438 FBtr0088501 3 1 1 105 2R 5503002 5554881 TCTTACGTGGAGCATGGTC 59 5502915 5502933 GAATGTCAGCTTCGAGTGG 58 NA Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 1 2 2 130 2R 5473113 5473131 GAAGAGAATACGCGACGAG 58 5473284 5473302 CAATAACGTCGTAGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 2 2 2 81 2R 5320556 5320643 TCATCTATCTAAAGGCTCTGTCC 59 5320684 5320702 GCGCGATAGAACTTTGAGC 59 NA Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 2 1 1 60 2R 5283295 5283314 AAGTGCCTCAAGGTATTGTC 57 5283200 5283272 CTTCCAGCCCGGATATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 sns FBgn0024189 FBtr0111043,FBtr0088635 2 2 2 81 2R 4711316 4711453 CATGGCCTATAGAACCTCTGG 59 4711496 4711514 GAATCGCGCCTTGTTATCG 59 NA Drosophila melanogaster 61 CG8735 FBgn0033309 FBtr0088730 3 1 1 118 2R 4485342 4485627 GATGACTCTGATAAAGAGCCA 57 4485244 4485263 ATTGTCTCAGTCTCCATTGC 58 NA Drosophila melanogaster 61 CG11669 FBgn0033296 FBtr0088757 2 1 1 90 2R 4357647 4357665 AACTGAGGAAATCGTCGCT 59 4357351 4357594 GAGATGTAACGCTTCACCAC 59 NA Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 3 2 2 86 2R 4351004 4351022 TTCTACCTGCACCAGTTCG 59 4351070 4351147 TCTCAAGACGTTACTCATGGT 58 NA Drosophila melanogaster 61 spaw FBgn0050365 FBtr0088773 3 1 1 60 2R 4247564 4247583 TTGATTCCGAACTAACGAGG 57 4247523 4247541 GCTTCCATCTCGTGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088811 3 1 4 123 2R 4035888 4043567 CCTAGCAGATCAGTAACAGGA 58 4035785 4035804 GCATGATTGACTGGGATTGG 59 NA InUTR Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876 3 1 2 192 2R 3849379 3849397 TCGATAGACAACTGAGGCG 59 3849145 3849164 AATGAACCATTTCGCCAGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30380 FBgn0050380 FBtr0088881 2 1 1 89 2R 3827040 3827058 CGTAACTGCGCTATTGCTC 59 3826969 3826987 TCATTGGGATCGTAGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088837 1 1 4 164 2R 3700676 3700694 CATGGATGACATAGCCAGC 58 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34216 FBgn0085245 FBtr0112409 2 1 1 88 2R 3591413 3591760 TTCCCTTTATGCAAAGCCAC 59 3591344 3591362 GGAGGAACTCCAGATGGAG 58 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837,FBtr0112838,FBtr0088938 3 3 3 80 2R 3596046 3596065 AATGCCACCTACATAATCCG 57 3595833 3596004 AAAGTTGTCATCAGACAGGT 57 NA Drosophila melanogaster 61 CG12107 FBgn0033209 FBtr0088924 1 1 1 132 2R 3562316 3562404 CTGGGCCTCGTACTATTCG 59 3562500 3562518 CAAACGACGTCATGAACCC 59 NA Drosophila melanogaster 61 CG2065 FBgn0033204 FBtr0088922 3 1 1 99 2R 3551794 3551870 GCTGCTGGATTCAAGAAAGAG 59 3551931 3551949 TTTCGAAGCCATCCTTGGT 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 3 3 3 145 2R 3479245 3479263 GAAGGATCCTTGTGAGCTG 57 3479369 3479454 CAGCTAAATGTTGTTTCACCTC 58 NA Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 2 2 2 80 2R 3382961 3383045 AGGAGACGGAAAGATTCACTC 59 3382901 3382919 ACTCGGATTCGCTTTCCTC 59 NA Drosophila melanogaster 61 CG30502 FBgn0050502 FBtr0300959 1 1 1 80 2R 3334678 3336934 GATAGTATGGAGCACCTAGTG 57 3334618 3334636 CCACTCATCGTAGCAATCC 58 NA Drosophila melanogaster 61 CG11112 FBgn0033164 FBtr0113047 1 1 1 106 2R 3288300 3288382 TTGTACGATCGCTTTGGTG 58 3288449 3288470 TTATGACCTTATCCTCGAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30385 FBgn0050385 FBtr0089047 3 1 1 60 2R 3070103 3070124 GTGTAATAGTCGTGACATTCGG 59 3070145 3070163 TAGCAAGTTTGCCAGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12828 FBgn0033145 FBtr0112770 2 1 1 85 2R 3036963 3036987 CTACTTGGAAATAGAATACTGCTCC 59 3036846 3036923 CGTTTACCACTAGGAACAAGTG 59 NA Drosophila melanogaster 61 Tsp42Er FBgn0033139 FBtr0089036 3 1 1 80 2R 2953003 2953193 GAGTACCAGACACAGTACCA 58 2953232 2953254 GCTACTTGGAACAGTTATGTAGG 59 NA Drosophila melanogaster 61 Tsp42El FBgn0033134 FBtr0089032 1 1 1 80 2R 2933508 2934789 CCTTATGGGCGATACTCGG 59 2934833 2934851 CGATGGCATATGCATCTGG 58 NA Drosophila melanogaster 61 Tsp42Ek FBgn0033133 FBtr0089031 3 1 1 83 2R 2931844 2931863 GTGAGAACTTTGTGGTGCTC 59 2931906 2931983 CGGCAATCATCATTAGAATGGT 59 NA Drosophila melanogaster 61 CG30160 FBgn0050160 FBtr0086178 2 1 1 61 2R 2893149 2893167 GTGGGATGAGAACAATGCC 58 2893192 2893282 AAGAGAAGGCCAACTGGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6u1 FBgn0033121 FBtr0086185 2 1 1 151 2R 2860416 2860434 TTCTGCCTCTACGAGTTGG 59 2860225 2860301 CGAAGCGTTTCATTGAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 ZIP1 FBgn0033096 FBtr0086139 3 1 1 196 2R 2604076 2604172 AAATTCTTTCTGACGAAGCGG 59 2603900 2603921 TGCGTTGGATAAGATTTCTGAG 58 NA InUTR Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0086115 3 1 3 183 2R 2556719 2556844 ATTGAAACAAGTGGAGGACAC 58 2557046 2557064 CATACGGCACGAACTTGTG 59 NA Drosophila melanogaster 61 CG14589 FBgn0033063 FBtr0085978 3 1 1 101 2R 2025679 2025697 GATTGCCGATCCGAATTCG 59 2025760 2025832 TAGATCATGCCTTGCAATTCG 59 NA Drosophila melanogaster 61 Act42A FBgn0000043 FBtr0086029 3 1 1 89 2R 1903101 1903122 AGCGGATAACTAGAAACTACTC 57 1902879 1902897 TAAAGCTGCAACCTCTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113,FBtr0111114 1 2 2 63 2R 494766 494785 CCAATTACGACAAACATCCC 57 494809 495867 TCTCCTTTAGATGACGATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Me28S-A2486 FBgn0086033 FBtr0114309 3 1 1 97 2L 5437713 5437731 TTTATCGCGGCATTGTGTC 59 5437634 5437653 ATCGTCAGATCGTCTGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42647 FBgn0261430 FBtr0302351 3 1 1 86 2L 22441003 22462336 AAAGGAAGGCATTTCGGAC 58 22440935 22440953 TAATGACCATCACCTCCGG 58 NA Nonspecific Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959,FBtr0085901,FBtr0085902,FBtr0301000 3 4 4 94 2L 21713227 21713246 CCATGCATCTAATGAACGGA 58 21713303 21716337 GTCCTTGATGTAGGTGGGA 58 NA Drosophila melanogaster 61 His2B:CG33870 FBgn0053870 FBtr0091874 1 1 1 60 2L 21532941 21532960 AGAAGAACATCACCAAGACC 57 21532900 21532918 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33843 FBgn0053843 FBtr0091847 1 1 1 60 2L 21501848 21501867 AGTTGAGAAGAAAGTGGTCC 57 21501890 21501908 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34136 FBgn0083972 FBtr0110944 3 1 1 82 2L 21097208 21097226 CTGTCGTTTCCCTACTGTG 58 21097270 21098595 CAATTGTTGGTGCTCATTCAC 59 NA Drosophila melanogaster 61 CG14397 FBgn0032914 FBtr0300444 2 1 1 83 2L 21094630 21094713 AGGAGGTGGTTTATGACCG 59 21094758 21094778 GTGGTATCAAACCAGCATGAG 59 NA Drosophila melanogaster 61 CG33322 FBgn0053322 FBtr0081455 2 1 1 99 2L 20814673 20814691 AGTTGAGGAGTTCCATGTG 57 20814522 20814610 TTTAGAAACTCGTGCAGCT 57 NA Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0302224 1 1 2 91 2L 20451265 20451347 GTTGTGTAATAGGCAACTACTACAG 59 20451393 20451414 CTACTTGGGATTCAGTTTCAGG 58 NA Nonspecific Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 1 2 2 80 2L 20432659 20432677 GGTCACCGAGGAGATACTC 58 20432718 20441066 GTGTGAAGAATTTGCATGTGAC 59 NA Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 3 2 2 121 2L 20060345 20060422 GCAACTTCAAGATGGCTGG 59 20060242 20060260 CGTAAGAGTTCGTGCACTC 58 NA Drosophila melanogaster 61 CG13965 FBgn0032834 FBtr0081308 1 1 1 81 2L 19962204 19962282 TGAAGCTGATTGGAATCGC 58 19962141 19962159 GACGCTGGAGATGATTCAG 58 NA Drosophila melanogaster 61 CG33116 FBgn0053116 FBtr0081249 1 1 1 83 2L 19534854 19534872 CAATGTCATGGAGGCAGTG 59 19534918 19534990 TGCGCATAAGAGTTGTAGAC 58 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 2 3 3 84 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457304 AATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 CG31797 FBgn0051797 FBtr0081227 2 1 1 60 2L 19259919 19259938 GAAAGTCTGTCCACCTTGTC 58 19259878 19259898 ATCCATGAAGTGACAGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 2 1 1 61 2L 18956464 18956485 ATTAGTACTGGACAACTTTCCG 58 18956318 18956442 TTTCATCCATGCACTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0273194 3 1 2 185 2L 18689702 18689786 CTGTGAATGTTTCGGCCAC 59 18689935 18689953 CCACTATCTGGGCATCCTG 59 NA InUTR Drosophila melanogaster 61 CG34171 FBgn0085200 FBtr0112362 2 1 1 80 2L 18379110 18379128 TGTTCTTGGCAATTCCTCG 58 18379172 18379252 AATCTTTGCCTTCGTACCC 57 NA Drosophila melanogaster 61 CG42634 FBgn0261357 FBtr0302275 1 1 1 60 2L 18008096 18008114 ATGCATCAGGCATTTCTGG 58 18008138 18008156 TGCCGGATACATCGATCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sytalpha FBgn0261089 FBtr0080987 2 1 1 80 2L 17601833 17601922 TGTATAGAAGTCATTCTCAGCC 57 17601960 17601981 CAAGACTCACATGCAAATTACC 58 NA Drosophila melanogaster 61 Dhc36C FBgn0013810 FBtr0080985 1 1 1 80 2L 17506725 17506886 CGTGGATAAGATTTGGAAAGAG 57 17506927 17506945 ATCTTGTCGATTTGCACCA 57 NA Drosophila melanogaster 61 Gr36c FBgn0045485 FBtr0080964 2 1 1 82 2L 17181351 17181375 CTACTGGGAAATGCTACAAATACTC 60 17181414 17181489 GGTTCTCAAAGGCTTCTTCG 59 NA Drosophila melanogaster 61 ChLD3 FBgn0032598 FBtr0080892 2 1 1 81 2L 16741825 16741844 ACCATTTGGCCTGTATTTCC 58 16741886 16741964 CAGATCGTCGAGGAATTTCAG 59 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 3 1 1 80 2L 16730216 16730292 CTTATCTACAAGCAAAGTCCTCG 59 16730330 16730350 ATAGTGATCCGTATCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34167 FBgn0085196 FBtr0112358 1 1 1 63 2L 16003164 16003182 CCTGCATGAAATGCACCTG 59 16003119 16003137 AAATAGAAAGGTGGCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sna FBgn0003448 FBtr0080739 3 1 1 63 2L 15478048 15478066 CATTGTCTTCGTGGAGGAG 58 15478003 15478021 CTGTGAGTCCTTGGTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 1 5 9 92 2L 15263392 15263411 TTTCCCTAGAGACACTGACC 58 15263116 15263337 TGCTCTCGGACATCTTCTC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300933,FBtr0300934,FBtr0300935 3 5 9 80 2L 15258830 15258849 TAGCTACTCCGATTTCAGCG 59 15258697 15258791 CGGGATAGATCACAATTCTTCTG 59 NA Drosophila melanogaster 61 l(2)35Bg FBgn0001977 FBtr0080725 3 1 1 124 2L 15037975 15038063 CTGTGGAAATTGTTATCTCGG 57 15037871 15037892 GTTAAATGTCGGATTTCAGGAG 57 NA Drosophila melanogaster 61 l(2)35Bg FBgn0001977 FBtr0080725 1 1 1 122 2L 15037974 15038061 GTGGAAATTGTTATCTCGGC 57 15037871 15037892 GTTAAATGTCGGATTTCAGGAG 57 NA Drosophila melanogaster 61 CG3491 FBgn0028887 FBtr0080675 3 1 1 96 2L 14928412 14928493 GGACAAAGTGGAGAAGATTACC 58 14928547 14928568 AGTGTTTGTGGATTCATCTTCG 59 NA Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 3 2 2 92 2L 13903705 13903790 ATCTTTACAGATCCCTCTACACC 59 13903635 13903653 CGATTTCGTGCTGGAACAG 59 NA Drosophila melanogaster 61 RpII33 FBgn0026373 FBtr0080544 1 1 1 60 2L 13833970 13833989 GTGTGCTTCGAGTATGATCC 59 13834010 13834030 CATCAGGTTTGGGATACAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33642 FBgn0053642 FBtr0091619 1 1 1 97 2L 13530288 13530307 AAACATCTCACCGAAATGGT 58 13530364 13530445 GTTGAAGTTCGTTCTTAGAGGA 58 NA Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 1 2 2 82 2L 13387100 13387184 TTTAGACGGATTGGAAAGTCTG 58 13387039 13387057 CTGTTTGTGCTCGATCGTC 59 NA Drosophila melanogaster 61 CG6523 FBgn0032509 FBtr0080465 2 1 1 91 2L 13366986 13367007 TGATGATATTCATGAAGGGCGA 59 13367059 13367140 GTACGGCAAGTTGGTTTCG 59 NA Drosophila melanogaster 61 CG9932 FBgn0032469 FBtr0089956 2 1 1 88 2L 13027741 13027823 CAAGTGTAACTTCGGGCAC 59 13027671 13027690 AGTTGGACTTCGGATAGCTG 59 NA Drosophila melanogaster 61 CG15484 FBgn0032452 FBtr0080406 3 1 1 60 2L 12707424 12707446 CTATGAACTGAGGAAGAAAGAGG 58 12707386 12707406 AAGCTCATAGGTATGAATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Patsas FBgn0029137 FBtr0080362 2 1 1 81 2L 12101434 12101507 CACATGCACTTCGATCCTG 59 12101371 12101389 CCGCAAGTAAGGATAACGC 59 NA Drosophila melanogaster 61 CG6734 FBgn0032395 FBtr0080312 1 1 1 140 2L 12014920 12015001 TACCAGCTCAAACCTCCAC 59 12014798 12014816 AAGTTTGGTGATGGTGCTG 58 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 2 1 2 80 2L 11790102 11790182 TATCAAGAAGCTACTGCTCCC 59 11790277 11790299 GGAACAGTCATCATCTTGATCAC 59 NA Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 1 2 2 80 2L 11511226 11511245 TCAACGGTGTATGATGAGGA 58 11510837 11511185 CACATACCTTAGAGTCTCTGC 57 NA Drosophila melanogaster 61 Reps FBgn0032341 FBtr0080230 3 1 1 81 2L 11106006 11106079 GACCGTGATTGAGATCACC 58 11105943 11105962 CAGGCATGAGTAGAACTGTG 58 NA Drosophila melanogaster 61 CG14072 FBgn0032318 FBtr0080145 3 1 1 81 2L 10937392 10937411 GTCTACAATATGCGGTCGAG 58 10937454 10937531 AATTCCGAGAGTTGAGACAC 57 NA Drosophila melanogaster 61 CG17086 FBgn0032310 FBtr0080142 2 1 1 133 2L 10852874 10853116 TATGCCGCTCAGAGTTCTG 59 10853213 10853231 CGATATTAACGCGATCCGC 59 NA Drosophila melanogaster 61 CG18561 FBgn0032301 FBtr0080190 1 1 1 60 2L 10792416 10792436 TGGCTCCATAAACACAAAGAC 58 10792376 10792394 CTTAAGCAGCCTCTTTCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pie FBgn0005683 FBtr0080046 2 1 1 61 2L 10422557 10422575 CGAATGGATGATTGTACGC 57 10422447 10422532 AATGCGTTGAGAGTAGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5846 FBgn0032171 FBtr0079891 1 1 1 60 2L 9956587 9956607 GGCTCCAGATTTGATTAGTCC 58 9956547 9956565 GACGATCTCGTTATGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 und FBgn0025117 FBtr0079866 3 1 1 111 2L 9764614 9764634 TCGCAACTTAAATGGACACTC 59 9764827 9764846 GGCGTAGAATTCATCCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4438 FBgn0032115 FBtr0079813 1 1 1 143 2L 9397897 9397915 TTTCTACGGCTCTTTGCAG 58 9397712 9397730 CGACCCTTGTAGCTAAGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13097 FBgn0032051 FBtr0079697 2 1 1 73 2L 8512857 8512876 GACAATCACCAAGAATCGCA 59 8512697 8512715 TTGAGGACTTCAGAGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079678,FBtr0079679 1 3 3 91 2L 8484071 8484089 ATCTGATCCACTTGTCGGG 59 8484144 8484818 CACGTTCGTAAAGTACCGC 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664 3 1 4 184 2L 8428059 8428329 CAAATTGAGGCCAGCAGTG 59 8428477 8428495 ATGGAAACGGGAACTTCGA 59 NA Drosophila melanogaster 61 CG13392 FBgn0032033 FBtr0079720 2 1 1 123 2L 8382516 8382600 AATAGGCGAAGTATGGTCGT 59 8382412 8382430 CAATCGACCATGTCCTCCA 59 NA Drosophila melanogaster 61 CSN8 FBgn0261437 FBtr0079646 2 1 1 80 2L 8365318 8365399 GGATCTTCTAAATAAGCAACGC 58 8365437 8365458 AGTAGATTGTGCTGGTAAATGG 59 NA Drosophila melanogaster 61 CG8349 FBgn0032003 FBtr0079594 1 1 1 251 2L 8216330 8216407 GTTCTGTGCTGTTGGTGAG 59 8216622 8216640 TGATAGGCTACCACAGCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8460 FBgn0031996 FBtr0079586 1 1 1 81 2L 8197551 8197635 GGCTATGTGACTCCATGGA 59 8197680 8197698 AAACCGGCGAGATAATGTC 58 NA Drosophila melanogaster 61 RpL36A FBgn0031980 FBtr0079546 1 1 1 141 2L 8042118 8042450 TCAGGAAGAAGGCCAAGAC 59 8041995 8042013 TGGATCATCTGTCCCTTGC 59 NA Nonspecific Drosophila melanogaster 61 baf FBgn0031977 FBtr0079535 1 1 1 80 2L 8029722 8029823 GGATTCGATATGGCCTACAC 58 8029864 8029884 CTTCATCCAGTCCTTGAACAG 58 NA Drosophila melanogaster 61 CG33121 FBgn0053121 FBtr0079557 2 1 1 60 2L 7889783 7889803 AGACGGAACTAGTTGAATCCC 59 7889690 7889712 GAGGTATTGCTGAAGATAAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7164 FBgn0031946 FBtr0079487 2 1 1 82 2L 7781842 7781920 ACCATGAAGTCGGTACGAG 59 7781966 7781984 ACTGGTACTGGATTCGGAG 58 NA Drosophila melanogaster 61 Cyp4d21 FBgn0031925 FBtr0079471 3 1 1 89 2L 7606645 7606664 TTACTGACAAGGTCATTCGC 58 7606715 7606794 CATCGTCTCCCATTATCAGC 58 NA Drosophila melanogaster 61 CG6055 FBgn0031918 FBtr0079449 2 1 1 283 2L 7466671 7471556 GCTATCCAAATATGTCTGTGCT 58 7471800 7471818 AAAGTCATTCTCCTGTGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Wnt10 FBgn0031903 FBtr0079435 2 1 1 83 2L 7369572 7369972 ACAAACTTGGCTCTATGGCT 59 7370018 7370036 CAGAGCTCCACTTGATCCT 58 NA Drosophila melanogaster 61 CG10158 FBgn0031871 FBtr0079366 1 1 1 148 2L 6945160 6945178 AAGCTGTTACGCTAGGGAC 59 6944966 6944984 TTATAATCTGGCCCACGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 1 3 3 80 2L 6713220 6713375 CATTCCACAGGCCTTTCTC 58 6713158 6713176 AACGAGTTGAAGATGACGC 58 NA Drosophila melanogaster 61 retm FBgn0031814 FBtr0079272 1 1 1 80 2L 6453047 6455542 TGATGAAGGCCTATGAGCG 59 6452985 6453005 ACTCGTCCTTAATGACCTCAC 59 NA Drosophila melanogaster 61 CG9523 FBgn0031812 FBtr0079257 2 1 1 94 2L 6425659 6425737 CATCCTGTCAACTATGCAGC 59 6425794 6425812 TTCATCAGCAGACGTGAGG 59 NA Drosophila melanogaster 61 WDR79 FBgn0031782 FBtr0079210 2 1 1 74 2L 6127549 6127623 CGATATGGACGAATCGGTC 58 6127493 6127511 CTCACGTTGTGATTCAGCA 58 NA DesignRelaxed Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079196,FBtr0079197 2 3 3 99 2L 6121936 6122016 GTCGCATTTCTCTAGAAGCC 58 6122075 6122096 AACTCATTGGTGATCTCATCCT 59 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218 3 1 4 113 2L 6047769 6047906 AGTAAAGGCTCAGCTCAGC 59 6047674 6047692 TATGTGCTCCGATGTCCAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Gal FBgn0001089 FBtr0079230 3 1 1 80 2L 6004845 6005017 CAATGCACTAAGGACAATTCTG 58 6004786 6004804 GTGAACCCAAAGTTTGTGC 58 NA Drosophila melanogaster 61 CG14000 FBgn0031749 FBtr0079153 1 1 1 60 2L 5909211 5909230 CAGGGCTCTAGCTATTCTCG 59 5909170 5909190 TTGGCTTATGGACCAATTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6907 FBgn0031711 FBtr0079096 1 1 1 60 2L 5524848 5524867 CTGATGGAACAGATGGACTC 57 5524889 5524908 TATCGTCCCACAAGGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5828 FBgn0031682 FBtr0079018 2 1 1 60 2L 5094330 5094349 TAATGTGCCAGTCAACAAGG 58 5094369 5094390 GTTTAGCTTGAGAAGCTCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3244 FBgn0031629 FBtr0077417 3 1 1 161 2L 4799866 4801824 AAGCAAAGATGAAAGTCACCC 59 4797618 4797636 GGTAGGAGAACTCCTTGGG 58 NA InUTR Drosophila melanogaster 61 Sfp24Bb FBgn0259952 FBtr0300297 2 1 1 80 2L 3669576 3669653 ACAGTCGGAAGTCAAATGC 58 3669514 3669538 CTCGAATAGCTATACCCTATAATCC 58 NA Drosophila melanogaster 61 CG8853 FBgn0031550 FBtr0077529 2 1 1 95 2L 3531115 3531134 ACTCGGAAAGGATATGGAGC 59 3531192 3531264 ACTGGGACATCAATCTCCC 58 NA Drosophila melanogaster 61 CG8851 FBgn0031546 FBtr0077526 2 1 1 80 2L 3521296 3521373 CAACACCTCACAGGATCAG 57 3521416 3521435 ATATCTCCAGAGTCCCTGTC 57 NA Drosophila melanogaster 61 CG9662 FBgn0031529 FBtr0077594 3 1 1 84 2L 3376537 3376556 AGATTCAGCATTCCAATGCC 59 3376412 3376491 ATATGATACCGCCTGTCACC 59 NA Drosophila melanogaster 61 CG33282 FBgn0053282 FBtr0113458 3 1 1 80 2L 3328292 3328367 GGCCATATGCGTGTATCTG 58 3328411 3328429 ATCAACACAGGAATCTCGC 57 NA Drosophila melanogaster 61 CG34393 FBgn0085422 FBtr0112637 2 1 1 81 2L 3189488 3189991 CCTCGATAAGCAGAAGAAGTG 58 3189427 3189445 GTTGCACGTCTTCTTTGGA 58 NA Drosophila melanogaster 61 Cpr23B FBgn0031467 FBtr0077618 2 1 1 78 2L 2838463 2838481 AACGATTTGAGATGGCAGC 59 2838594 2838612 TAGTTGTACTCCGCTTGGC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or23a FBgn0026395 FBtr0077698 2 1 1 80 2L 2654793 2654812 CAAGACTCTGGAGGAGAACG 60 2654850 2654924 GTCACATCGAGTAATCTATACAGC 59 NA Drosophila melanogaster 61 CG3227 FBgn0031434 FBtr0077746 2 1 1 73 2L 2576555 2576638 ACCAATATCAGCGCATAGTC 58 2576501 2576519 CAGAAACAAGGGCTTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp309a2 FBgn0041337 FBtr0077748 2 1 1 81 2L 2571701 2571719 ATGGCATCGGAGAAGAGTC 59 2565556 2571659 GTCGAAGGGATTCATAGATCAC 58 NA Drosophila melanogaster 61 CG3528 FBgn0031430 FBtr0077781 2 1 1 112 2L 2517591 2517662 AAGCAAATTTCGACCGTCG 59 2517497 2517516 GTAGAGTTCTCGAATCGCGA 59 NA Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 1 2 2 80 2L 2136631 2136735 CCAAGACCTACCAGAACCA 58 2136779 2136797 GATCCGACGAGAATTTGCC 59 NA Drosophila melanogaster 61 CG4259 FBgn0031389 FBtr0077854 2 1 1 96 2L 2129061 2129144 AACTACAATCAGATACGACGTG 58 2128986 2129004 GAAACAGCCAATCCCTCTG 58 NA Drosophila melanogaster 61 CG31661 FBgn0051661 FBtr0077932 2 1 1 60 2L 1497489 1497512 CCCTGATAAATTCCTACGATACCA 60 1497530 1497549 AATGATTGATCTCCGACCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 3 6 6 154 X 19417822 19417840 CACAAACACGATCTGGAGC 59 19417957 19418036 GATTTGTCTGGCAGCATCTG 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074715 3 1 8 95 X 19390736 19390754 TCTGTATTCATCGGGTGCA 58 19390813 19400529 TGTTCCTTCTGCGTTTACG 58 NA InUTR Drosophila melanogaster 61 Rtc1 FBgn0020909 FBtr0073820 2 1 1 114 X 13652012 13652030 AAGATGTCGGGTAATTCGC 58 13652108 13652192 GTGTATCCTCCGACTCCTC 58 NA Drosophila melanogaster 61 CG4766 FBgn0027546 FBtr0070891 1 1 1 80 X 5893529 5894040 GAGTGCAATGGCAGATTCG 59 5893467 5893488 ACCCATTTGATTCAGATACAGC 58 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070793 1 1 2 191 X 5389801 5389886 GACTTGCTGGATAATGAAAGAG 57 5389631 5389649 TACTTGAAGACGAAAGGCG 57 NA Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 2 2 2 107 X 4793478 4797990 CACAATTGGCTATGGAAACG 57 4798060 4798078 GTACTGCTCAGGTAGACCA 58 NA Drosophila melanogaster 61 CG11077 FBgn0039930 FBtr0089222 1 1 1 60 4 1049488 1049509 ATATTGGTCCGCAACTATATGC 58 1049449 1049468 GCACGAATCTGAAGTTTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL32 FBgn0039835 FBtr0085759 3 1 1 81 3R 27079013 27079088 TCTTTGTCCCTTCTGCTACC 59 27079131 27079150 ATCTAGACCGAGTGTCTCCT 59 NA Drosophila melanogaster 61 CG18528 FBgn0039189 FBtr0084628 3 1 1 137 3R 20185278 20185614 GAATACGAGCCAAAGGCTC 58 20185159 20185177 CTGAAACTCGCAGGAATCC 58 NA Drosophila melanogaster 61 NP15.6 FBgn0027785 FBtr0083712 3 1 1 61 3R 14853271 14853289 GAAGGATGAGACCATCACG 57 14853314 14853332 GACTCGGATTGGCAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9631 FBgn0027563 FBtr0082898 2 1 1 183 3R 10051835 10051997 AAATGAGGAGTATGATGCCC 57 10051671 10051689 GTCCGAATCTATTCTGGGC 57 NA Drosophila melanogaster 61 CG4674 FBgn0037856 FBtr0082325 1 1 1 90 3R 6720765 6720783 TATAGCCAACTGCCATCCA 58 6720837 6720912 CTTCGTATGAAGGTGGCAG 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082308 3 1 4 95 3R 6599737 6602913 TCCTACGCAGTTACGACTC 58 6599660 6599680 CTTCGAGGTGTACGAGTAGTC 59 NA Drosophila melanogaster 61 CG13311 FBgn0035929 FBtr0076589 1 1 1 81 3L 8795130 8795208 AAGAAACCTATGCCTCATTGTG 59 8795070 8795088 ATTGTTGGCTTGGCAACTG 59 NA Drosophila melanogaster 61 CG8564 FBgn0035776 FBtr0076869 3 1 1 84 3L 7379778 7379860 ACTCTCGCACCAAGAATCC 59 7379712 7379730 TTTCGGTTGCAATCAGTGC 59 NA Drosophila melanogaster 61 CG10103 FBgn0035715 FBtr0076949 2 1 1 80 3L 6749372 6749394 GAAGGAAATAGCCGACTATTTGG 59 6749250 6749334 TAGTCCTCCCTAATGATGTGC 59 NA Drosophila melanogaster 61 CG12082 FBgn0035402 FBtr0073114 2 1 1 147 3L 3147614 3147632 CTATCCGGATCCAGAGCTG 59 3147424 3147443 GTTATCTGCGTACTTCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30096 FBgn0050096 FBtr0289994 2 1 1 88 2R 12209405 12209496 ACGACAGGAATATACGAATTCC 58 12209284 12209302 AAATGGTTTCCCTGCTTCC 58 NA InUTR Drosophila melanogaster 61 CG13177 FBgn0040759 FBtr0112772 3 1 1 82 2R 8051418 8051500 CCTATAGAGGACAAGAAACCC 57 8051544 8051562 GATGGAGCTGCATAGTAGC 57 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 1 4 4 83 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG8292 FBgn0032004 FBtr0079632 3 1 1 86 2L 8217614 8217695 GTGTGGCAGTATAACGATCC 58 8217547 8217565 GGAACCCTCCTCAAATGGT 59 NA Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300460 3 1 2 152 2L 7257569 7257587 GTGAGAAAGTGAGGTTCGA 57 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13995 FBgn0031770 FBtr0079187 3 1 1 90 2L 6057496 6057578 ACTACGTACAGGTCATGCC 59 6057632 6057650 AATCGCGGATGCTTTACTG 58 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 1 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 1 2 5 154 2L 836168 836560 TCTACAATGCAGTGGCTCC 59 836032 836051 TGATACTGCGGGAACTTGAG 59 NA Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077963 2 1 2 60 2L 1166957 1166975 CAGCAACTTTCATCCCGAC 59 1166997 1167017 TTGGGTAACGTTATAGTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ing3 FBgn0030945 FBtr0074614 3 1 1 91 X 18546959 18546977 ATCTGGAGATGATCGAGCA 58 18546810 18546904 GTCCATGTTGTTCTGGACG 58 NA Drosophila melanogaster 61 CG10909 FBgn0038090 FBtr0082685 2 1 1 60 3R 8736112 8736133 GCTCTGATGCTAAATGCTAGAC 59 8736073 8736093 GTAAATAGGCCACGAAGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 3 2 2 80 3L 4287618 4287698 GTTAAGAATTGGCTTGCTAGC 58 4287740 4287758 GAAACTGAACTTGGTGCCA 59 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173,FBtr0081304 1 2 2 100 2L 19971472 19971490 CAGAGCCATTATCGAGGAG 57 19971302 19971408 GATAGTGTTGCTGGACCTG 57 NA Drosophila melanogaster 61 CG18304 FBgn0031869 FBtr0079367 1 1 1 80 2L 6934900 6935003 GAGCTCAAGGAACAATTACAGAG 59 6934842 6934861 CTGTTGCTCATAGCGAAGTC 59 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 2 3 3 80 X 17462411 17462429 ACCAATTTACACGGAGCAC 58 17462281 17462367 CCGGTCTTAACGTCTTCAG 58 NA Drosophila melanogaster 61 dgt6 FBgn0039638 FBtr0085414 2 1 1 80 3R 24954596 24954683 GACAGAACAATCAATGACTCAC 57 24954537 24954555 ATGCGAGACATTGAATGCA 58 NA Drosophila melanogaster 61 Pdf FBgn0023178 FBtr0085024 2 1 1 72 3R 22281566 22281584 ATCCTCGAGAACTCCTTGG 58 22281512 22281533 TCAACAAGGAGTTGATTAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rgn FBgn0261258 FBtr0078346 2 1 1 194 3L 21404665 21412712 GTCTTAACCAATAGCCCGTC 58 21412866 21412887 GATAAATACTTGACAGCACCAC 57 NA InUTR Drosophila melanogaster 61 Z600 FBgn0004052 FBtr0075549 2 1 1 61 3L 15502387 15502406 GAAAGTTCCAAACCGAACTC 57 15502428 15502448 GTAAGTGTACATGCGATTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 3 3 3 80 2R 13461205 13461294 TGTCGGAAACATACGATTACC 58 13461335 13461354 AGTGATGCAACAGACAACTC 58 NA Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0300872,FBtr0073513 3 2 2 126 X 11471082 11471102 GAGCTAATTGAGAAACACCTG 57 11471256 11471274 GTTTCTTCATCACCATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 1 2 2 80 3R 2909299 2909421 TGCATGCTAGGTATTCAGCA 59 2909238 2909256 GATCCTGTACCACCATCGG 59 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684,FBtr0113683,FBtr0113682 3 3 3 83 XHet 22994 23088 ATTTACTCAACCGACCAAACTG 59 23131 23150 TATGTGAGCGACGCTATAGC 59 NA Drosophila melanogaster 61 Pros45 FBgn0020369 FBtr0077189 3 1 1 111 X 21187215 21187297 CGAATCGGATGGAAATCGAG 59 21187371 21187389 AAATTCTGGTGCTTCTCGG 58 NA Drosophila melanogaster 61 Alr FBgn0031068 FBtr0074794 3 1 1 283 X 19643159 19643177 TTCATCATGTCTGCCGAGG 59 19643503 19643521 GAAATTCCCAGCCTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG12231 FBgn0031026 FBtr0074779 3 1 1 60 X 19425594 19425612 GACAGGGAGATCAGTACCG 59 19425552 19425572 CGTAGATGTTCAGCATTACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 3 1 1 73 X 18660465 18667263 CTCTTTCAGTTCTCGCAAGC 59 18660411 18660429 TAGCGCTCACAGGATATGG 59 NA DesignNoJunction Drosophila melanogaster 61 scu FBgn0021765 FBtr0074511 3 1 1 228 X 17985412 17985991 ACAATGATCAAGAACGCCG 58 17986183 17986201 ACTTATCCTTGGCCGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6867 FBgn0030887 FBtr0089574 1 1 1 80 X 17919988 17920077 CTATAACAGACATCCAAGTGCC 59 17920118 17920136 CGGTGCAGCTCAAATTCAG 59 NA Drosophila melanogaster 61 CG5010 FBgn0260747 FBtr0074387 3 1 1 259 X 17043121 17043139 AATTCTTGCGTGAAACCGA 58 17044012 17044030 CCATCTGCTGGAACATCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0073996,FBtr0112985 2 2 2 60 X 15074905 15074925 TCAAGGAGATCGACTACATGC 59 15074946 15074965 TAGATGCCAATTCCGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0073996,FBtr0112985 1 2 2 60 X 15074909 15074927 GGAGATCGACTACATGCCC 59 15074951 15074969 CTCGTAGATGCCAATTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 1 2 2 94 X 14087772 14088051 GAATTGGACTGCGACTACC 58 14088109 14088127 TTGCACATTAGTTCCGCTG 58 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 2 4 4 80 X 13698246 13698330 AATCAGTACCAGGAGGAGC 58 13698371 13698392 GTGCAGAGTTAAAGCTATCGAG 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 1 4 4 80 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607081 TATGTTGTGCTTGCGTGAG 58 NA Drosophila melanogaster 61 CG15201 FBgn0030272 FBtr0073439 1 1 1 158 X 11038402 11038420 TCTCAAGTATCTGCCGCTG 59 11038673 11038691 GTGAAGCGATCCTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 1 3 3 98 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616641 6616659 CATGAAGCTCAGCATGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 3 2 2 153 X 5964445 5964465 TCCTACGAGGATTGGTATGAC 58 5964222 5964330 ACGGATTCTCAGATCTGCC 59 NA Drosophila melanogaster 61 CG15765 FBgn0029814 FBtr0070817 1 1 1 115 X 5730178 5730770 TTTATGTGGTCGAACTCGC 58 5730849 5730867 CAGCGGTAATCTCGAATGG 58 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 2 4 4 80 X 5317775 5317861 CGGAGAAGAATTCATCTTACCTG 59 5317901 5317919 GTACCCTTGATCATCGGCA 59 NA Drosophila melanogaster 61 CG4198 FBgn0029753 FBtr0070750 2 1 1 60 X 5208142 5208160 CCTACCAGGTGTCCATAGC 59 5208250 5208268 TCCGTGTATTCATGCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Bzd FBgn0011566 FBtr0070447 1 1 1 95 X 2502129 2502214 TCTCATGTCCCATTACGCC 59 2502052 2502070 CTCTCGGCCATCATATCGG 59 NA Drosophila melanogaster 61 CG3703 FBgn0040348 FBtr0070187 3 1 1 197 X 836819 837342 GGACTCAATTCCCATTTGC 57 836640 836658 TTAGATGTTGCGGAAGTGC 58 NA DesignRelaxed Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 2 2 8 84 X 550805 551138 ATAACCTGCAAGAGAAAGCC 58 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 3 2 2 99 4 1194714 1194794 GACAATACAGACTCGACTGG 57 1194634 1194652 TACAACCCTTATGTGGGCA 58 NA Drosophila melanogaster 61 CG31999 FBgn0051999 FBtr0089144 1 1 1 80 4 240821 240841 ATTCCATTTCTACGAATCGGC 58 240646 240782 CATTTGTATCTATGCAGGCACC 59 NA Drosophila melanogaster 61 CR31541 FBgn0037309 FBtr0078783 2 1 1 60 3R 1094816 1094835 ACTTTGCTGTTAACTCGACC 58 1094857 1094876 TGACCGAAGTTGTAGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir100a FBgn0039879 FBtr0085846 1 1 1 60 3R 27627395 27627415 AAATGGAGAATATAGTGGCGG 58 27627436 27627455 AAAGATGATGTCCACCTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15517 FBgn0039718 FBtr0085515 2 1 1 82 3R 25729266 25729346 AATAGTACCGTCTGCCTCAC 59 25729203 25729223 ACCGAATTTCCATCCATTGTG 59 NA Drosophila melanogaster 61 CG42592 FBgn0260969 FBtr0301747 1 1 1 60 3R 25661937 25661957 CTTCTTATCAAGCGGTTTGCA 59 25661897 25661916 CTTACCGATATTCCGAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2321 FBgn0039663 FBtr0085436 2 1 1 123 3R 25313965 25314036 AACTAGATCTTTCTCTGCCGA 58 25313862 25313880 GAGTCGTTGGCATAGTGGA 59 NA Drosophila melanogaster 61 dgt6 FBgn0039638 FBtr0085414 3 1 1 81 3R 24954596 24954683 GACAGAACAATCAATGACTCAC 57 24954536 24954555 TATGCGAGACATTGAATGCA 58 NA Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 3 2 2 62 3R 24409532 24409552 GATCTGTTTCCGTTCTACAGG 58 24409490 24409508 CAGCGAATGTCGAATGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18437 FBgn0039536 FBtr0273246 1 1 1 80 3R 23496652 23496726 CCAGAAAGGTTTATGGCGA 57 23496770 23496788 TGGAGGTGATGATAGTGGG 58 NA Drosophila melanogaster 61 CG31065 FBgn0051065 FBtr0113383 2 1 1 84 3R 22990098 22990116 CTATGGCCATGAGCATGTG 58 22990164 22990237 TAGCACAGTACACTCCACC 58 NA Drosophila melanogaster 61 CG6066 FBgn0039488 FBtr0085131 1 1 1 60 3R 22941725 22941745 GGTGAAGGGTTCTTACATAGG 57 22941685 22941703 CTTGTGCTTTCTCTTGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 2 1 1 76 3R 22460651 22460724 GTTTCTTACGTTGTTGGCC 57 22460763 22460782 TCACAGGTCCTCCATAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 3 2 2 92 3R 21305993 21306115 CAGAGAATATTACTGCATGATCCAG 59 21305925 21305943 TTGGTGATTGGGTTGACGA 59 NA Drosophila melanogaster 61 CG11920 FBgn0039274 FBtr0084769 2 1 1 64 3R 20900827 20900845 CTGAAATACGCGGATGAGG 58 20901366 20901385 CATCCGGCATAGTGATACTC 57 NA DesignNoJunction Drosophila melanogaster 61 Esp FBgn0013953 FBtr0084703 3 1 1 81 3R 20674114 20674132 GCATCACAGTTGGTCTCAC 58 20674177 20674265 TACAAGCCATAGGCTACGG 59 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 1 4 4 81 3R 19816489 19816507 ATTAACTTCCGCCGAGGAC 59 19816364 19816444 ATGTGCTGTGTTCTGACGA 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 2 2 2 160 3R 19779096 19779181 GGAATAACGTTGTCCGCTG 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 1 3 3 80 3R 19574387 19574472 CCGACATTATCATCAAATGGCT 59 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0112485 2 1 2 101 3R 19333180 19334827 CAGGATAGCCAATCAAGCC 58 19332916 19332934 CTTCTTTAAGCACGCCGAG 59 NA Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 2 1 1 61 3R 16407094 16407169 CAGTTCCTACGAGGAGCAC 59 16407051 16407069 TTAGATCTCCTAAGGCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10887 FBgn0038773 FBtr0083864 1 1 1 94 3R 15940787 15940861 ATTCAATAGGAGGAGCCCG 59 15940919 15940937 AATGTGAACGGCTTTGGTG 59 NA Drosophila melanogaster 61 CG14867 FBgn0038333 FBtr0083095 3 1 1 147 3R 11206920 11206938 CGATGCACCATCATCAGTC 58 11207049 11207234 ATTTGTGCCAGGGTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 3 2 2 120 3R 10399020 10399040 TTGCCAAAGATTCTTCTGGTC 58 10398848 10398938 CATAGGACGCACTTGAAGG 58 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744,FBtr0082742 2 3 3 90 3R 9136958 9136978 GCAGTACTTATAAGCTCACCC 58 9137030 9137134 CAACGGTAGTTGAAGGACG 58 NA Drosophila melanogaster 61 pic FBgn0260962 FBtr0082709 2 1 1 81 3R 8881938 8881959 CGATGGAGATCTAATTGAGAGC 58 8882001 8882081 CAGTGTCAACTCCAATCCC 58 NA Drosophila melanogaster 61 Hsc70-2 FBgn0001217 FBtr0082707 1 1 1 133 3R 8870798 8870816 ATGTGGCATTCAACGAGAC 58 8871367 8871387 CTCCTGTATCTTCTTGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 3 1 1 72 3R 8463102 8463122 CGCCTTTATGTTCATATTGGC 58 8463153 8463281 GAGTTGAAGAAAGTGCTTTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 GstD6 FBgn0010042 FBtr0082573 2 1 1 60 3R 8203433 8203452 CAGATGGTATAAGAACGCCC 58 8203474 8203493 AATTCTTGCCAAGTTCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD3 FBgn0010039 FBtr0082570 1 1 1 60 3R 8198926 8198946 CGATTTCATCAAGATCAACCC 57 8198967 8198986 GGTGAAACCATTGTCTACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL37 FBgn0261380 FBtr0302273 3 1 1 81 3R 6608747 6608823 GCTAAGAACTTGTATCCTTTGC 57 6608687 6608707 CTTGGTGTTTGTTAAACACCG 58 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 2 3 3 84 3R 5590341 5590415 AACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 CG33654 FBgn0053654 FBtr0091633 3 1 1 141 3R 5408793 5408811 AGTTCACCAACCTCCAGTG 59 5408578 5408689 CTGTAGCCGTTAAATCGTGG 59 NA Drosophila melanogaster 61 CG33189 FBgn0053189 FBtr0081940 2 1 1 60 3R 4605995 4606015 ATCAGAACAAGTCGAAGAGCA 59 4605955 4605975 CACACTTCATCCTTGTTGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8043 FBgn0037610 FBtr0081902 3 1 1 102 3R 4502676 4502695 AAATCAGTTCCTTGCTCGAC 58 4502759 4502843 CTATTCATGCTTGTGCTGGA 58 NA InUTR Drosophila melanogaster 61 CG2993 FBgn0037521 FBtr0081771 3 1 1 82 3R 3632486 3632645 ATATACCCATGATGCCGCC 59 3632422 3632442 GTTGGTCAAGAACTCAGTGTC 59 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0112841 2 1 2 67 3R 3190259 3190340 CTTCTAAAGACCACTTCTCGA 57 3190212 3190230 AGTAATATCCGCAGCACGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600,FBtr0081601 3 3 3 80 3R 3044630 3044726 GTATCTGATAATAGCGTTCGTG 57 3044571 3044590 CACAAATCCCACTGTTATGC 57 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600,FBtr0081601 2 3 3 80 3R 3044628 3044724 ATCTGATAATAGCGTTCGTGGA 59 3044569 3044590 AACACAAATCCCACTGTTATGC 59 NA Drosophila melanogaster 61 alphaTub84B FBgn0003884 FBtr0081639 1 1 1 119 3R 2912465 2912975 TGCGTGAATGTATCTCTATCCA 59 2913055 2913073 TCTTGTCAGACGGCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 1 1 1 162 3R 2904129 2904561 CTTCATTCAAGCGTGGTGG 59 2903985 2904005 ATGTCGTTGATGTATGAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17919 FBgn0037433 FBtr0081711 2 1 1 134 3R 2169964 2170264 TGTTAAAGGTCACGTACAGC 58 2170361 2170379 GATCCGTCATAATGAGCGT 57 NA Drosophila melanogaster 61 NPFR1 FBgn0037408 FBtr0078590 3 1 1 94 3R 2018050 2018070 CAACACCCTGGTTGTTATAGC 59 2018125 2018206 AAAGTAGGTCCGATATGGCC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0300911,FBtr0078674,FBtr0300906,FBtr0078675,FBtr0300910,FBtr0300907,FBtr0078672 1 8 12 151 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1586623 1586641 GAAGACGCTTCTGGTACTC 57 NA Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 1 2 2 80 3L 23087935 23088013 GCTGATAGGCTTCAAACTGG 59 23087874 23087893 GGGTTGACCAATACGAACTC 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 3 5 5 119 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776610 22776628 AATACGCTCACGTTGTTGG 58 NA Drosophila melanogaster 61 croc FBgn0014143 FBtr0078395 1 1 1 60 3L 21467818 21467836 AGCAATCTGAGCCACTACC 59 21467776 21467794 CGTACTTGATGCCGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 3 2 2 87 3L 20835436 20835507 AACATGTTAGAGCCGTGCT 59 20835557 20835576 TATGGCAACTACAGTGGAGC 59 NA Drosophila melanogaster 61 CG13813 FBgn0036956 FBtr0074827 3 1 1 97 3L 20225582 20225666 CTCTATAGACATGAGCCTAATTCTG 58 20225721 20225739 TGGACTATGTCCAGTACCG 58 NA Drosophila melanogaster 61 CG3902 FBgn0036824 FBtr0075076 3 1 1 159 3L 18891262 18891283 CATTCAAGATGATGAACAGCCT 59 18887925 18891052 AGTTTGGCAACAGTCTCCT 59 NA InUTR Drosophila melanogaster 61 CG5589 FBgn0036754 FBtr0075170 3 1 1 106 3L 17796346 17796364 TACATTCATCGGATCGGCA 59 17796197 17796276 ATTATAAGCGCGATGCCTC 58 NA Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 3 2 2 98 3L 17393990 17394009 ATCGTGTTATCAGGACGACC 59 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12486 FBgn0036541 FBtr0075533 1 1 1 60 3L 15849163 15849184 CACTGAGCATATCTACGAAGAG 58 15849124 15849144 TACTTTCGTACTTGTGACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Msh6 FBgn0036486 FBtr0075646 3 1 1 85 3L 15150122 15150207 GCCAGTATTGTTCCTTAATGAG 57 15150058 15150076 CCTTAAGGATTCCACCCAG 57 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 2 2 3 93 3L 15104004 15104022 CAACAACATAACCACCGGA 58 15104079 15104197 GTGTGGGACAACTTGAACC 59 NA Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 2 2 2 113 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075457 14075479 AGTACTCCGTATCTTGGATATCC 58 NA Drosophila melanogaster 61 CG17300 FBgn0036345 FBtr0075892 1 1 1 80 3L 13080164 13080263 TTCTCGAGATTAGCCTTACGTC 59 13080105 13080123 CCTACTTAGTCCTTGGGCG 59 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076175 2 1 2 151 3L 11438604 11438679 TGGCGACGATGGATTATCC 59 11438857 11438875 TTCCAAGTTCAGAGCCTCG 59 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 2 3 3 86 3L 11152077 11152408 TACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 CG18179 FBgn0036023 FBtr0076388 2 1 1 60 3L 9632723 9632744 GTGACAACTTTATCAGCCATCC 59 9632765 9632783 ATCAGACCGATGTCACGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5068 FBgn0035951 FBtr0076519 3 1 1 84 3L 8980425 8980443 TCGATATGCGAGGTCATGG 59 8980490 8980846 AAGTCACCGATGTCCTTAGC 59 NA Drosophila melanogaster 61 CG6765 FBgn0035903 FBtr0076621 1 1 1 84 3L 8510350 8510428 GTGTTCCACATCCTTTGATACG 59 8510473 8510491 GTTGAACATGGCCAACTCG 59 NA Drosophila melanogaster 61 CG42660 FBgn0261536 FBtr0302558 3 1 1 80 3L 7458707 7458780 TTGCCGCAGGATTTAATGG 58 7458823 7458842 GCATAACATGATGGTGACCC 59 NA Nonspecific Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 3 5 5 133 3L 7365497 7365515 GCGAGAATCAGCTAAGGGA 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 unc-13-4A FBgn0035756 FBtr0290001 3 1 1 80 3L 7262827 7262845 TGGTCATTGAACTACTGCC 57 7262642 7262785 GGTTAAGAGTACGCTTATGCA 58 NA Drosophila melanogaster 61 CG5568 FBgn0035641 FBtr0077025 3 1 1 146 3L 5864858 5864934 CTGCCCAGATTTCAGTTACAG 59 5865042 5865060 TCAAGTGAGTGGTCAACCT 58 NA Drosophila melanogaster 61 CG32271 FBgn0052271 FBtr0073105 3 1 1 60 3L 3202674 3202693 CCAAAGTGTCCACCATTGAG 59 3202633 3202651 ACCTTGATCAGATCGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 FucTD FBgn0035217 FBtr0072693 3 1 1 127 3L 1417275 1417294 GCTGTGTACTTGGTCTACGA 59 1417384 1417458 TAGTGACTGCAGTCATCGG 59 NA Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597 3 1 2 99 3L 831382 831404 CTAAAGTACTTCGATACAGTGCC 59 831232 831329 GATATAGATAGTGGTTGCCAAACTC 59 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 1 3 3 80 3L 185060 185138 ACATCTTTCAGTACGCTGG 57 185180 185200 CCACCAATTTAGGAGCTAGAC 58 NA Drosophila melanogaster 61 5SrRNA:CR33431 FBgn0053431 FBtr0086423 1 1 1 60 2R 15624954 15624972 ATACATCGGTTCTCGTCCG 59 15624912 15624930 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 IFa FBgn0053527 FBtr0091490 3 1 1 60 2R 20465318 20465337 CCAGAACGACAGCAAATAGG 59 20465277 20465296 GCTCGAGATCAGTTCTTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072143,FBtr0072142,FBtr0301411 3 4 4 82 2R 19832407 19832486 CATTCAGGATTATGCATCTAGTCC 59 19832522 19832545 CCTTGTCTTTCCATAGTTCTTCTG 59 NA Drosophila melanogaster 61 CG13558 FBgn0034869 FBtr0072056 1 1 1 60 2R 19387313 19387331 TGGTGGAGAATCCCTTCAC 59 19387355 19387373 ATATGGTACTGGCGCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34372 FBgn0085401 FBtr0273218 2 1 1 80 2R 19354782 19361614 CAGTATCTCAAGTCCTTTCATCTC 58 19361653 19361671 CTCGTATTTCACAGCCAGC 59 NA Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072026,FBtr0072025 3 2 2 97 2R 19300607 19300625 ACAAGTACAAGTCCGTCCA 58 19300309 19300546 AATGGGAATATCGAGGGCC 59 NA Drosophila melanogaster 61 CG3788 FBgn0034800 FBtr0071995 2 1 1 80 2R 18820693 18820713 CCTGACATACTCTACCACCTG 59 18820562 18820653 GCATACAAACCTCACATCACC 59 NA Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071747,FBtr0071746 3 2 2 168 2R 17606590 17606610 CAATTCCGTTGAATCGGACTC 59 17605058 17605076 CTGGCGTCTCAGATACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 1 2 2 80 2R 17557087 17557108 GTGGAATCGATTTGGAGAAGAC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 LSm1 FBgn0261067 FBtr0071628 2 1 1 121 2R 17057739 17057819 TACTGGGCGAAATAGACCG 59 17057636 17057654 TACTAGGCGGTGTTTCTCC 58 NA Drosophila melanogaster 61 IM4 FBgn0040653 FBtr0071559 3 1 1 115 2R 16756720 16756738 CTTCTCTTGGCCATGTTCG 58 16756564 16756587 GTTCTCTAATCCTAACCAGTACGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5190 FBgn0034351 FBtr0086696 1 1 1 60 2R 14339743 14339762 TCACTTACAACCCAGATGAC 57 14339783 14339803 TCGTTGTTCATAGTGTCTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fj FBgn0000658 FBtr0086754 1 1 1 60 2R 14122055 14122073 CTTCCATCTGGAGCAGGAC 59 14122095 14122115 GGTGTCCAATTTCTTCACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 1 1 1 83 2R 13454602 13454624 GCTATTCTTAGTGCCGAATATCC 59 13454483 13454559 TAGATTGATGAGCGCACCT 58 NA DesignNoJunction Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 1 2 2 122 2R 12473800 12473818 AAGATCCTCAGCTCTGTGG 58 12473904 12473922 CATCGAGGAGAGCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 3 2 2 138 2R 12083327 12083345 CACAATGCGCTACTTTCCA 58 12083148 12083226 CCTGTACATCGTGACATCCA 59 NA Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 2 2 3 80 2R 11269850 11269868 ACCAGGAGCTTATGGAGGA 59 11269909 11270919 CATGGTAGCGATCATGAAACAG 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 2 5 5 80 2R 10790221 10790300 CCGACAGTAATGGCAACAC 59 10790159 10790181 TAGAATCCAGCAGTATGGATACC 59 NA Drosophila melanogaster 61 Aats-phe FBgn0020766 FBtr0087594 1 1 1 80 2R 9857095 9857183 TATGGTGGAGCAGATCAGTC 59 9857225 9857244 TAAACAATGCGGAAGCACAC 59 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 3 3 3 138 2R 9849830 9854266 CATACGTTCAAGCTGGAGC 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 1 2 2 80 2R 8258089 8258181 GAAATGACGAAGGACGATGG 59 8258219 8258242 ACTTAGATGACTCATATAGTGCCC 59 NA Drosophila melanogaster 61 CG30049 FBgn0050049 FBtr0087906 3 1 1 80 2R 8243986 8244004 AGGAGAATCCTCTACAGGC 57 8244046 8244115 CCAAATTGATAACTGCCTTGC 58 NA Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088042 2 1 2 89 2R 7860470 7860488 AAGTGTTTGGTGGACATGC 59 7860539 7862874 ACTAGCTTGTTTATCAGCAGC 58 NA Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 1 2 2 80 2R 5709901 5709921 GTGGACCTGATCATATTCCTG 58 5709778 5709859 AGATTCAGCATCGTAAGCC 57 NA Drosophila melanogaster 61 CG12926 FBgn0033437 FBtr0088502 3 1 1 91 2R 5496231 5496249 ACTTTGTAAATGCGCCCTC 58 5496097 5496179 GTGTATATGAAACCGTTTCCGA 58 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 1 1 1 60 2R 5341175 5341194 GATATGCCTACCTAAGGCCA 58 5341083 5341154 TCAATTACCTTGAAGGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 2 3 3 81 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619837 4619857 AACTTCGAGATGAAGAAGTCG 58 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 2 2 2 117 2R 4278942 4279017 GTATAAACAGGCTGAATGCCTC 59 4279095 4279113 GGACCAGGTGAATCATCCC 59 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088812 1 1 4 123 2R 4035890 4043927 AGCACGAGAATCAGTAACAG 57 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 CG30495 FBgn0050495 FBtr0088920 3 1 1 81 2R 3544735 3544754 GTTTCTGCAAAGCATAGCAC 58 3544798 3544929 CTGCATATACAGCCTCACG 58 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 2 1 1 202 2R 3167670 3167751 AACCCACTGCTTCAGAGTC 59 3168061 3168079 AATGGTAGTGTGCTTGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17002 FBgn0033122 FBtr0086170 3 1 1 104 2R 2874431 2875153 CCAGCAGAAACACGATGAC 59 2875312 2875331 GTCTGGTAGAAGACCGTTCC 59 NA Drosophila melanogaster 61 sced FBgn0013732 FBtr0086110 3 1 1 60 2R 2545944 2545963 AAACTCAATCTGCTGGACAC 58 2545986 2546004 TGCTCGACTCATGGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-525a FBgn0083038 FBtr0113539 1 1 1 60 2L 20418384 20418404 CTGTTGTGTCTCAAATGTTCC 57 20418425 20418444 TTGATTATTCAGGATGCCGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U5:23D FBgn0003934 FBtr0077658 1 1 1 70 2L 3048705 3048725 CTGGTTTCTCTTCAATTGTCG 57 3048757 3048775 TAGAGTGTTCCTCTCCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir40a FBgn0259683 FBtr0301086 1 1 1 80 2L 22213466 22213560 GGTCGTACCTTTCGGTCTC 59 22213404 22213423 GCTGTTAAACTCCTCGTCCT 59 NA Drosophila melanogaster 61 His3:CG33851 FBgn0053851 FBtr0091855 1 1 1 60 2L 21515343 21515361 CGCTCAGGACTTTAAGACG 58 21515385 21515403 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33880 FBgn0053880 FBtr0091884 1 1 1 60 2L 21508323 21508342 AGAAGAACATCACCAAGACC 57 21508282 21508300 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470 2 1 2 80 2L 21158888 21159012 CAGTTCCGATCAGACATGC 58 21159056 21159074 GACGGTGGTTCTATTTGCG 59 NA InUTR Drosophila melanogaster 61 CG31680 FBgn0051680 FBtr0081383 1 1 1 121 2L 20640185 20640277 GGGCTTTGTTCTAAGTGAATCC 60 20640357 20640377 CTATCCACTGGTAGAACTCGG 60 NA Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081264 2 1 3 135 2L 19581894 19582015 GCCAAACAACTATCTCGCT 58 19581777 19581795 TTGTGGTTCCACTTAAGGC 58 NA Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 3 2 3 186 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123380 19123398 ATGAAGAAGTGGGTACCCT 57 NA InUTR Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 3 2 2 175 2L 16744377 16744700 AGCGTACAGTAATGCTACCA 59 16744835 16744856 GTGGATGCATAATCTTTGTGGT 59 NA Drosophila melanogaster 61 Pgant35A FBgn0001970 FBtr0080629 2 1 1 60 2L 14360552 14360571 CACCATGTTGAAGAACTCAC 57 14360590 14360612 GTAATCCTTGTACTGATCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16820 FBgn0032495 FBtr0080452 3 1 1 171 2L 13249380 13249398 TGCAAGTGAACAGTGTTGC 59 13249533 13249616 GCCTTGATGTTGTCGATGG 59 NA Drosophila melanogaster 61 CG16974 FBgn0032479 FBtr0080489 1 1 1 81 2L 13186382 13186400 GCTGGAGAACCTTCCTAGC 59 13186251 13186338 GTAGCAGTCTATGTCCTCGG 59 NA Drosophila melanogaster 61 CG16978 FBgn0040972 FBtr0080495 2 1 1 111 2L 13144458 13144478 ATGAGCGACATATTTGCAGAC 59 13143759 13143777 GTTGGGCGGTACTAGAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 A16 FBgn0028965 FBtr0080427 3 1 1 89 2L 13020292 13020311 AACGACGAGGACTTCTTCAG 59 13019918 13020240 GAATTCAACCTTTCCCGCC 59 NA Drosophila melanogaster 61 CG6766 FBgn0032398 FBtr0080308 1 1 1 80 2L 12040315 12040333 AGTACGACTGCCTGATTCC 59 12040191 12040274 GAGTAATTGGAGACAACTCTGG 58 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 3 1 2 107 2L 11790005 11790077 TGTCCCAATCAAAGGTTCCT 59 11790203 11790380 CCAAATCCATAACAGAAGACTCG 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 2 2 5 171 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278897 11278918 GCTGTGACTTGAATACTTGAGG 59 NA Drosophila melanogaster 61 Samuel FBgn0032330 FBtr0080161 1 1 1 81 2L 11029046 11029064 TAACTCCTGGTCTGTGGAC 58 11014641 11029001 ATCACGAAACGACTGAACG 58 NA Drosophila melanogaster 61 CG16743 FBgn0032322 FBtr0080147 3 1 1 60 2L 10972783 10972804 GGAGCACAAGTACAATTATCCT 58 10972821 10972843 CATTTCTTGATACGGAGGATAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14069 FBgn0032315 FBtr0080175 1 1 1 60 2L 10910330 10910348 GATGTGCCACCATTCTGAG 58 10910288 10910309 TGAATCTCGAGTAGCATTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 1 2 2 87 2L 10152774 10152792 CCTCATCTATGTCCGTCCC 59 10152843 10152967 TATGAGATTGCGTGTGCCT 59 NA Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 1 2 2 97 2L 9962388 9962406 TGCTACTCAACGTACTGGT 58 9962051 9962328 GAGGAAATTCTGAAGCAGGG 58 NA Drosophila melanogaster 61 CG3841 FBgn0032131 FBtr0079836 2 1 1 152 2L 9590668 9590748 AATGCAAATGTGCACTTGG 57 9590861 9590882 GATTTCCGTAGTATTGTCACCT 58 NA Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301128 3 1 2 75 2L 8028167 8028651 GTTGGATGGTTGGCATTCG 59 8028110 8028128 TTGGGCATGTAGATCCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7102 FBgn0031961 FBtr0079559 1 1 1 80 2L 7884706 7884725 AGTGCGTTAAGACTAATGCC 58 7884572 7884665 CCAAGCAGAAATAGTCTGAGG 58 NA Drosophila melanogaster 61 CG14535 FBgn0031955 FBtr0079564 1 1 1 118 2L 7847887 7847906 TGCACATCCTCTATCAGCTC 59 7847648 7847809 GCTGATCAAATTGTTGTCTTGC 59 NA Drosophila melanogaster 61 CG13794 FBgn0031936 FBtr0079507 3 1 1 88 2L 7721176 7721195 TTGGATCATTTCCTTCGGAC 58 7720966 7721128 CAATGCCTTCATTGTAGTAGTG 57 NA Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 2 2 2 89 2L 7475792 7475811 TTCAACGGTTGTGAACTGAC 59 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 60 NA Drosophila melanogaster 61 CG17375 FBgn0031861 FBtr0300821 2 1 1 80 2L 6805349 6805442 ACTTATTCTTGGTATGTGCGAC 58 6805290 6805311 CCTTATTTGCGTTTCATCTTCG 58 NA Drosophila melanogaster 61 CG12512 FBgn0031703 FBtr0079077 2 1 1 87 2L 5342038 5342056 GATGAACAGCAAGCTGCAG 59 5340982 5341987 CATCGAGGTGGAAATGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14036 FBgn0031677 FBtr0079029 1 1 1 60 2L 5054908 5054926 CCCTTACGACAAATCGCAC 59 5054866 5054886 GCACTTAATTAAGTGCTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 1 2 2 172 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051410 5051428 TGGGTATTGATCTGGCCAG 59 NA Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0077507 1 1 2 90 2L 4007831 4007849 TGTGGTTGTTCCCACTCAG 59 4007903 4008762 ATGGTAGCATTCGCATGGT 59 NA Drosophila melanogaster 61 CG15418 FBgn0031554 FBtr0077556 3 1 1 80 2L 3621313 3621396 GATAATAGCCTGCAGACAGC 58 3621252 3621270 CCGGTCTTCTTGTTGTAGG 57 NA Nonspecific Drosophila melanogaster 61 CG31952 FBgn0051952 FBtr0077591 3 1 1 74 2L 3417262 3417281 CAATTGCTGTCAGGGATTCG 59 3417318 3417336 CTTTGTCCTTAGCTGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2975 FBgn0031468 FBtr0077619 1 1 1 82 2L 2842028 2842046 CCCACTTCACTGGTATCCC 59 2842090 2842172 AGCAGTCACTGGAGTTATCTG 59 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 2 2 5 101 2L 2452405 2455066 TAAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 CG15357 FBgn0040719 FBtr0077871 2 1 1 60 2L 1945422 1945440 CTTCGCATTACTCCTGCTC 58 1945380 1945400 ATGGTTATATCTTCTGGCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango14 FBgn0031312 FBtr0077961 2 1 1 157 2L 1159324 1159342 GATCTCTGTCGATCCACCA 58 1159462 1159769 CTGATTTGATGGAGCTGCAG 59 NA Drosophila melanogaster 61 Nnf1b FBgn0051658 FBtr0078008 3 1 1 83 2L 811134 811155 CATGCACAACTTGAATCTAAGC 59 811199 811272 TTGGCCATAGCAATCTCGA 59 NA Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0078079 1 1 2 181 2L 551311 551330 TATCGACAGGTTTCCCAAGG 59 548210 551167 GGTACGGATTTGGTTCGTC 58 NA Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0112854 3 1 2 256 2L 548207 549032 TTCAATGATCCGTACCAGC 57 547892 547987 TAGTAGTACCTGAGTGCCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG13692 FBgn0031254 FBtr0078057 3 1 1 80 2L 422119 422142 CCTCTAATCTCTGTCAGATTTCAG 59 422180 422253 TAGTATTATGCTGCAGACGC 58 NA Drosophila melanogaster 61 CG31921 FBgn0051921 FBtr0078096 2 1 1 60 2L 332052 332071 CCTCTGATATCGGGACTCTG 58 332011 332030 TGTCGCATTAACTCGTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11592 FBgn0025686 FBtr0078134 1 1 1 60 2L 287488 287506 ATGGAGACTGGTGATCTGG 58 287446 287464 TGATTTCCGTAAGCTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3345 FBgn0031240 FBtr0078127 3 1 1 92 2L 269379 269465 TCGGACAGGACTTCAAGAG 58 269520 269539 TTAGGTTGGAGTCGTGTAGC 59 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0078101 1 1 3 81 2L 72925 72943 TTCCTTCGGATTGCATCAG 57 74913 74931 ACAGCATCTGCATATTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 3 4 4 80 2L 872015 872035 ATCGCCTCAAGATAAACTCAG 58 872076 872222 CTAGAATGCGTACACCTTCG 58 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 3 5 6 197 2L 1726645 1727655 AAAGTACTTGTGACAGCAACG 59 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 3 5 6 197 2L 1726645 1727655 AAAGTACTTGTGACAGCAACG 59 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 1 4 4 60 2L 2769206 2769224 CTACCCGCAAATCTTCGTG 59 2769164 2769182 TGCCATTATCAGGGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 3 4 4 224 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882296 2882314 GATTATCCGCGAAGGAGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 1 2 2 73 2L 3545743 3545761 ATCACCTATTCGTGCGAGG 59 3545798 3546739 TGACTACATCTGTGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 2 5 6 91 2L 4307446 4307566 TACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 2 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343806 4343825 AGTAGAAGGCCTTCAAGGAG 58 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 2 2 2 81 2L 4399592 4399670 GGAGAACAAGGTTAACGCG 59 4399714 4399733 TTAGAAGGGCGAATTCATGC 58 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 1 4 4 62 2L 4904915 4904939 CTCCATCTTATCCATAGTTTACTCC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 1 4 5 108 2L 5277015 5277033 AGTTATCCGTCACGGACTC 58 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 1 2 5 86 2L 5277992 5278010 CTTTGGCCAGTTCAAGGAG 58 5277171 5277943 AGTGAACGCTCAATGAAACC 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 1 4 4 91 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719354 5719372 CATACCGAATGGCATCCAG 58 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 2 2 2 100 2L 6033999 6034021 CACGGAATGGATTATATGGTGTC 59 6033866 6033939 AGAAAGCTAGCTCCCTTGG 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 3 2 3 82 2L 6110156 6110174 GATTAGTACGCGACTCGGT 59 6110220 6113043 AGATCTTCTTGACACCGCT 58 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327,FBtr0273250 2 2 4 80 2L 6680519 6680961 TATCAAGTGCACAGTGATGTG 58 6680459 6680479 CAAGTTCGTATCTGTTCCACC 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 2 3 3 98 2L 6722213 6722231 CAGACCTCCCAGAAGTTCG 59 6722078 6722154 CTCTACGAACTTGGTCAATTCC 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 3 2 3 82 2L 7059191 7060979 AGGAGGAGAAATCCAAGAACTC 59 7061021 7061040 CGGATTGAGAATCTTCTCGC 58 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 1 2 2 80 2L 7379581 7379601 CAGTTTCATTGGCGATATCCT 58 7379643 7379719 TACTTGGCATGGAACTCCT 58 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 3 2 2 96 2L 7388044 7388062 CAATTCGGAAGAGCTACGC 59 7386640 7387986 CCAAGTTTCCACCAATCTGTC 59 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469 2 1 2 112 2L 7385134 7385271 CGTGCAGTTGAGTAAACGG 59 7384982 7385058 CAGAACGTTTGTGACCGTC 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079461 2 1 5 112 2L 7456824 7456842 CAATTGTGGCGTTCTACGT 58 7455753 7456752 CTTCAACACCTGATTCAGTACAG 59 NA Drosophila melanogaster 61 CG6055 FBgn0031918 FBtr0079449 3 1 1 277 2L 7466558 7466576 TAAGTGAATCGTTGCGTGC 59 7471681 7471699 AGAAGTACGAGTGGGACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 3 2 2 135 2L 7800619 7800639 ACTATTGGAGATAGAGGCCCT 59 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300332 1 3 4 150 2L 8175383 8176576 AATCAGCGCTTGAGTTTGG 59 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300332 1 3 4 150 2L 8175383 8176576 AATCAGCGCTTGAGTTTGG 59 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0301338 1 2 9 100 2L 8223337 8223835 GAACTGCACCGAAATTCGG 59 8223255 8223273 GTATCCATCTGACGGTCGT 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 1 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 2 3 3 62 2L 8440883 8440901 TCTCTTCGAGCCAAAGGAG 59 8440925 8441037 TCTTTGATAATCTCCTCCGGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 3 3 3 81 2L 8938685 8938704 ATTCATTCTGATCGCAGTGG 58 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 2 2 2 99 2L 9613533 9615312 AAGATAAGGCCGATCTCGA 58 9615375 9615393 GAGATCATCTTGCAGGGTC 57 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199 2 1 3 81 2L 9617774 9617795 AAGATAGAAGAGCAAACGACCA 59 9617831 9621159 GGAAATTCATACTATGGATTCTGGG 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 3 2 2 136 2L 9940471 9940490 TAACCGCAGAACAGACTCTG 59 9940648 9940667 GAGTTCCTTTGCATTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 4 7 80 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256495 10257402 ATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 1 5 5 80 2L 10297752 10297773 AATCGAGGTAGAAGACGAATCC 59 10297595 10297713 CAAGTAAATAAGCGTACGCCA 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 3 5 6 101 2L 10399596 10399614 AAATGCATCAGGGAAAGCA 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672 1 1 2 80 2L 10923193 10923212 GCATCTACGAATGCCAAGTG 59 10919382 10923153 TAAACTGAGGCTCGACTATGAC 59 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0080203 1 3 4 137 2L 11237095 11237113 CAGCATCCACTCACAAGGA 59 11237213 11237367 CAGTTCGTGTTTCGGATTGG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 3 2 17 137 2L 12727106 12729938 ATTTGGCCAAGTGCTATCC 58 12730038 12730057 AATGGCGTTGTATCGAACAG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 1 2 17 112 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727109 12729195 GTACGAGGTAACTTGGCCA 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 3 2 17 143 2L 12736124 12736142 TATGCATTGTCCCTCCGAG 59 12736248 12737969 GTAGCCAGAACCTGAAATGC 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 2 3 3 83 2L 15958577 15958710 GACTCGAGCATATGTCTGGA 59 15958755 15958774 TTTGTAGCAAGCATTAGCGT 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080846,FBtr0080847 3 4 4 199 2L 16314849 16322968 ACTACGATGGAGAACGCTG 59 16314607 16314625 TTCCAGGTTCAGCTTCTCG 59 NA DesignRelaxed Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 2 3 3 80 2L 16665211 16665231 GAGCAAGAATATTTGTCCGGT 58 16665100 16665173 CGCTTAAGGGTCTTATCATTCAG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 2 5 16 80 2L 16769277 16770465 CTAAGCTCATCTACACCTACTCC 59 16770505 16770523 AACGGTTGGTATACACGGG 59 NA Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 3 1 1 90 2L 17182553 17182572 CTGCTATCTTGGATAGCTGC 58 17183058 17183076 GAAGGAGGTTCTTTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 1 2 10 80 2L 17402473 17404069 GAACATCAACGAGCAAATACTG 58 17404108 17404128 AGATCGGATACCTTTATGCTG 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 3 2 10 98 2L 17402404 17402422 GGAGAAGCTGATGGTGGAG 59 17402482 17404077 GCTTCGATCAGTATTTGCTCG 59 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 3 4 4 81 2L 17418040 17418059 TCAAACAGATGGCCATAGCT 59 17417633 17417999 AGTTTCAGCTCCACATTAACAC 59 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 2 3 4 80 2L 17415383 17417583 TACCCGAATCCAGAACTCC 58 17415321 17415339 CATGAGACTGCGCTTTAGG 58 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012 1 1 2 87 2L 17810926 17812077 GCGAGAATCGACGAATATTCG 59 17810859 17810877 GTAAATGACACCGGTGGTG 58 NA Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 2 2 2 81 2L 18133015 18133033 CTATGATGTTCCGAGAGCC 57 18132599 18132971 ACATCGATTTCCATTCTGCA 58 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231 2 1 4 124 2L 19183327 19183395 AATCGTAAATCATGTGCTGC 57 19183222 19183241 AAATGAGCACTGGATGTAGG 57 NA InUTR Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 2 2 4 196 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387582 19387600 AACCGATAGATCCGGAAGC 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107 3 3 6 92 2L 19510636 19510654 CTATCCGGGAACCACTCTG 59 19510129 19510581 GTGTAGTTCTTGTGCGTGTG 59 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 1 2 3 80 2L 19779320 19779407 CCTGTGCATACCAACAACG 59 19779258 19779277 CACATGCAGCTTGATCTGAC 59 NA Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 2 2 2 88 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729655 20729884 TCGTCGTTATCCAGTTCCT 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 2 4 9 130 2L 20876958 20876976 ATCTGCCCACTAGTCAGTC 58 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 1 1 1 60 2L 21164665 21164683 GGCCTTTCTCTGCATTCTG 58 21164766 21164784 AACGTGATTCAGCATGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081509 3 1 4 87 2L 21292855 21292879 CATGAGTAACCGTGTTACTATTCAG 59 21297328 21297347 CATTCTATCCAACCCAGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 2 5 5 80 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617419 21617498 ATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 2 5 5 80 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617419 21617498 ATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 2 3 3 110 2L 22473764 22473782 AGCATGATCACTGAAGACC 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 His-Psi:CR33867 FBgn0053867 FBtr0091871 2 1 1 60 2L 21539228 21539246 CGTAATTCGTGATGCCGTG 59 21539186 21539205 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111268 3 1 2 130 2R 130194 130273 TTGAGGAGAAATTCGAGCG 58 130082 130103 GCCGATTGATATTTCTTCATGC 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 2 4 4 82 2R 705343 705361 CTATATGCTGTCTGCGGGA 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467 2 1 2 80 2R 1082459 1082482 CAGGGATCGATTTAGTAGAAACTC 58 1081198 1082422 TATGTGATCCCATTCCTTGGA 58 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 2 2 2 87 2R 1952497 1952515 AGTCCTACCCTGTGTTCAC 58 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 3 3 3 99 2R 2884360 2884441 CATGTCCATGACGTACTCG 58 2884503 2884522 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111099 3 1 59 80 2R 3237335 3237355 AGAGATATCCACTAGTTTCGC 57 3236463 3237295 TCGATGAACTTGTACCATCTG 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 1 3 59 81 2R 3241438 3249237 GATTGGTCATCACAGAGCC 58 3241375 3241394 ATGGACTCCACAATATTGGG 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111077 2 1 59 80 2R 3246365 3246383 CATAGACGTAGAGCTGGCC 59 3236472 3246322 TTGTACCATCTGAAGGACGG 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 2 1 1 94 2R 3399777 3399797 CACACTTTGCTCCTTTAACCA 59 3399637 3399657 GCATGTCTGCTGCTTATACAG 59 NA DesignNoJunction Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832 3 1 2 193 2R 3694089 3694580 ACAATAATGCCAGAGCCGA 59 3695103 3695122 AAACTCATAGGGATCCCGAC 59 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 1 4 4 83 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 2 4 4 85 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806336 3806416 TCGATAAGAACCTCTTCGCA 59 NA Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 2 1 1 61 2R 3828676 3828695 TATACGCATGGGATTCGTCC 59 3828770 3828788 ACGTGAACAGTAATTGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 1 1 1 90 2R 3954878 3954896 CTTTCCAATCTGGATGCGA 57 3954757 3954775 TATTCGACCTTCTGGCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 2 1 1 91 2R 3954879 3954897 GCTTTCCAATCTGGATGCG 59 3954757 3954775 TATTCGACCTTCTGGCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42516 FBgn0260390 FBtr0300661 3 1 2 91 2R 4018776 4018794 AAGAAGAGGAATGTGCACG 58 4018620 4018638 CTCGTACTCCGAATCGGAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055 3 1 2 156 2R 4026650 4026668 GACAAGGAGCCCTTCTACG 59 4025177 4026450 TGCTGCAGTATGAGGACTG 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325 1 1 4 159 2R 4381682 4408636 CAGTCGACTTTATTAAAGCGCA 59 4381544 4381563 AGGATGTGACAAGTGGACAG 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 1 2 3 97 2R 4505959 4506035 CAGTTACGTTCGCAATACAG 57 4506095 4506113 AGATCACCTTGCTGTTCAG 57 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088642 2 1 2 117 2R 4783044 4783063 CAAAGACGACATCGATAGCA 58 4783141 4783470 GTTATCTTGCGTATGGGTCAG 59 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 1 1 1 78 2R 4793148 4793166 CCACAATTGTGGCCTTCAG 59 4793024 4793042 AAGTTGTCGGTAGCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658 2 1 3 84 2R 4842282 4842300 TATATGTGAAACGGACGGC 57 4842348 4842473 GTGCAGACATCTGTAGCTG 58 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273384 3 1 2 142 2R 4858553 4858944 ACGGTCGGAAGATTCAGTG 59 4858429 4858449 CTTGTTCTTGGTGAATAGGCC 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 3 3 12 159 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007269 AAACATTACCACCGGATTGC 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 3 3 12 159 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007269 AAACATTACCACCGGATTGC 59 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 3 1 1 65 2R 5341147 5341165 AAGAACTACTCGTGTCCCT 57 5341049 5341070 CAACTCGAAGTCTTTACATTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112673 2 1 4 101 2R 5457797 5457815 CTTTAACTCGAGCAGCGAC 59 5457651 5457732 GTATCGCATGAGTGATGCA 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112673 3 1 4 102 2R 5457797 5457815 CTTTAACTCGAGCAGCGAC 59 5457650 5457731 TGTATCGCATGAGTGATGC 58 NA Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467,FBtr0302051 1 2 2 84 2R 5594446 5594539 CTTTAAAGATCACATACGACCC 57 5594584 5594602 CATGTAGGATTGTCCCAGC 58 NA Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 2 3 3 83 2R 5649052 5649133 GATATACGTTGCGGTTGTGAG 59 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 1 2 2 80 2R 5786778 5786866 GCACATGAAGGTGATGTGG 59 5786716 5786737 CACCTATAGAGCATGTAGAGGA 58 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088447 1 1 5 100 2R 5807023 5807041 GATCTTACGGCGACAACCT 59 5806343 5806959 CAAATGGTGGGCTGAATCC 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0113062 1 1 5 83 2R 5948860 5949614 TTTCACAACCTGCTCAACTC 58 5949660 5949678 GACCGACTGATCCATCCAG 59 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 2 3 3 106 2R 5982044 5982062 TACCATCGAACCGGAATCC 59 5982132 5982211 GTCTCGAGTCTTCTGCCAG 59 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088409 2 1 3 130 2R 5978290 5979265 ACGACTGGGATGAAGATGG 59 5979359 5979377 CAAGCCCAAGTTGTGATCC 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943 3 1 3 128 2R 6021509 6022783 TACAGTCCCGAATACGGGA 59 6022875 6022893 AGCTCGTTCCGTATCTGAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301965 1 1 17 80 2R 6187704 6187722 GGCAATCAGAAGTCCAAGG 58 6187763 6192112 ATTGGGAGACTCTTTAAAGGTC 57 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 1 2 3 80 2R 6343081 6343099 CTTATTCGGAAGTACCGGG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089346 1 1 26 80 2R 6389914 6389933 GATTCGAGTCCGTAATTGGC 59 6389725 6389873 ATATGTAAGACTGAGGGCTCG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089356 3 1 26 185 2R 6414474 6414584 TCTTCATCGTGCAGAAATGC 59 6414308 6414326 CATGTGACGCCTCAAAGTG 59 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284 2 1 3 162 2R 6527873 6527891 GTCCTTGGATGACCTGGAG 59 6528078 6528180 TTTCTTGTAATCGTCCTCAGCT 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 3 5 5 106 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624496 6624578 CCGATGAAGGTCACCTCTG 59 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 3 4 4 105 2R 7269386 7269467 CCGATAAGGTTGATCACGG 58 7269299 7269317 TCCGTGTATGTAACGTCGA 58 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 1 3 3 121 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 1 6 6 153 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 1 3 6 83 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548627 8548645 GACAGGATGACGATCAGCA 59 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 2 4 4 135 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641197 8641218 CTTATCCATGTTCACCTTACCT 57 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 2 4 4 135 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641197 8641218 CTTATCCATGTTCACCTTACCT 57 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 2 6 6 80 2R 8765630 8765648 TCTTGGGTCTGTTTACAGC 57 8765510 8765586 CCATGAGAACCTCTTTCGG 57 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0100656 2 1 6 81 2R 9331983 9332001 CTGGCCATCAAGAATTCCG 59 9330651 9331938 AAACCGGAAATGGGTTGGA 59 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672,FBtr0087673 3 2 2 264 2R 9409618 9409831 ACTGAGAGGCAACTACCAG 58 9410059 9410077 TTCCATGTTATAGGTGCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087679 1 1 2 100 2R 9461358 9461376 CAACGATCCCAACGATGTG 59 9460020 9461294 CCAGAAAGCTCTGCATCAG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 2 9 15 137 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 1 2 2 93 2R 10639146 10639229 GGCATTGAGGTTCAATTGTG 58 10639072 10639090 CAATCAGACGAGCTTCCAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 2 2 13 102 2R 11856645 11856664 TCGAAACTAGCTGTCTTGTG 58 11854017 11856583 TCACGTAGATGGTAGTACTCTC 58 NA Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 3 2 2 80 2R 12034718 12034736 CTGTAGTGCCATCATTGCA 58 12034592 12034675 ATGGAAAGGTGGATAAGTGC 58 NA Nonspecific Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 3 3 3 103 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471728 12471746 AGATCCGAAAGATCCTGCT 58 NA Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 1 1 1 81 2R 12665988 12666006 CAATGTGCGACGTTAACGA 59 12666106 12666124 ATGTTACCCAGACCAAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 1 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 3 3 4 148 2R 12747151 12747173 GCGGATATGTCAAAGAGATTCTG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100250,FBtr0100252 1 2 4 88 2R 12884559 12884577 CCGTGTTACCATGACTCGA 59 12884222 12884507 GTGTTGTAGCATTGCCGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336 1 1 2 80 2R 12991128 12991146 ATTAGCGCAGATCAGTCCA 58 12991188 12993118 CGTAGAACGATAGTTTCTGGG 58 NA Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 1 2 2 86 2R 13300527 13300545 ATTGGAATTTGCACGCCAG 59 13300653 13300671 CTTCTCCACAGTACTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 3 3 7 97 2R 13715433 13715451 TCTAACGGTGGATTTGCCA 59 13715508 13715851 CCGTATAATCAAAGGACTGTTGG 59 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 1 2 4 81 2R 13755839 13755857 AGGAGGTGCAATCTGATGG 59 13755049 13755795 TCATCTTCGTCGGAAACTCC 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 1 2 2 80 2R 13987097 13987187 CGAAGATAAGCATGCATAAACG 58 13987228 13987246 GGGACTCATTTGGATCGTC 58 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092 1 1 2 90 2R 13984490 13984556 AACGTAAGACCCATGCCTC 59 13984606 13984628 GTCTGTGGTCCATTATATTTGGG 59 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 3 5 5 108 2R 14043478 14043496 GATGTCGTCGGATCAACAG 58 14042988 14043409 GAGTGTTACATCTGTGAAGCTC 59 NA Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 2 2 2 85 2R 14058153 14058231 GGAAATAAGGGTTGCCGTC 58 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 1 3 6 80 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169010 14169145 ATGTAATACCGTCTCAGCTCC 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0301149 2 1 8 191 2R 14311505 14311646 CAAAGGAGATAATACAGCCAACC 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 1 2 2 125 2R 14547589 14547607 GCTTAAATTGTCGGTGGCC 59 14547427 14547503 TAAATTGAGCTTAAAGGCAGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 1 1 1 94 2R 14552700 14552719 ACATTGCATCCATTAAGGCA 58 14552568 14552588 GCCATGATAGATTAAAGCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 3 3 3 81 2R 14882582 14882600 AATGTCACCCTACAACGGT 59 14882642 14884408 CCATAATTTGACCTGATGTGGG 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 2 2 3 197 2R 14892378 14893301 CTAGCATCAAGGTACAGCG 58 14893462 14893480 GTTCTTCAAGTACCGTGCC 58 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 1 3 3 89 2R 15280206 15280224 ACTATTGTGAGCGCTGAGG 59 15280075 15280156 GCTGAAATCGTATTCATCCTCG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 3 7 10 81 2R 15296039 15296060 GAGGATAGAAGATCCACTCCAG 59 15295915 15296001 GTCCTTAATTAGTTGCTGGACAC 59 NA Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 2 2 2 66 2R 16151893 16151912 GATGTCGATCTTACCAAGCG 58 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 2 3 5 87 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212014 TTGTTTAGGGAGCTAGCCA 58 NA Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 1 1 1 89 2R 16768359 16768377 CATTGAGAAGATGCCCGAG 58 16768554 16768572 AAGGATAAATTGCCCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 3 8 15 89 2R 16911179 16911197 GAGTTAACAGCCAGTTGCG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 2 4 4 173 2R 18294822 18294971 ATTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0112820 1 2 3 69 2R 18430847 18430871 GACATATCTCATCCTAAAGGATCAG 58 18428450 18428468 ATAAGATCGCTCCGACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775 3 1 13 81 2R 18818619 18818637 GAAGCACTCATTGAGTCCC 58 18818681 18819048 ATGGATTTGTCCTGACTTGC 58 NA Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 2 1 1 132 2R 18964887 18964905 ATCTGCACAAGATTCGAGC 58 18964707 18964725 CAGGGATATTCCCACAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 3 2 2 89 2R 19132120 19132189 AGATGACCGCATTTACTGCT 59 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 1 2 2 127 2R 19272684 19272706 CCTATTCTCAAATCCATGGATGG 59 19272459 19272532 CCAAGCGTACTCTCATGTG 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 2 2 4 80 2R 19797347 19799208 TCGTACGATGACTCAGGTG 58 19799247 19799270 GTCGTACAGATATAGATTTGGGTC 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 3 2 4 148 2R 19833771 19833965 ATACCAAACGCCAATCGAC 58 19834154 19834175 TGAAATGTGGATAGCAGTAGTG 58 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 2 2 2 80 2R 19937806 19937894 GATCCCAATGACATGATTACTTCC 59 19937927 19937951 CCACTTGTGATAGTAGTTATTCTGC 59 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 1 4 4 86 2R 19941661 19941740 CGAACAATCTATTGGACTATGACAG 59 19941599 19941617 TGTAGAGTCGCAGACTTCG 59 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312,FBtr0072313 3 3 3 118 2R 20479588 20479609 ATGCTGATCACCATTAAAGACG 59 20479687 20479764 ACATGATCTCTGTACTCGCT 58 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 3 4 4 81 2R 20552130 20552148 GCTAAATCTATCGTCGGCG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 2 2 2 125 2R 20557254 20557274 CGATGGAGTCCTATTTGTTCG 59 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072434 2 2 3 99 2R 20660803 20660824 AGTGAACTGGATACTCTTACCG 59 20660309 20660743 TCTTGGTCACTTGAGCCTG 59 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 3 3 3 80 2R 20721182 20721203 CACCCTCACATTATCTACCTCC 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 3 4 4 178 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979237 20981813 AGACCAAACATATGTGGCG 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 2 3 4 87 2R 10510501 10510703 GCAATTAAGACCTGTGCCA 58 10510924 10510943 GGATTAAGCATCTGGGTCAC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 1 9 9 80 3L 143207 143522 TTGTCCATACGCCAAATCG 58 143565 143584 TGTTCTCAATAGCTTCCGAC 57 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 2 5 9 119 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 3 2 2 80 3L 709020 709097 AAAGATGAGATCAAGGAGACTG 57 708899 708917 CACATCGTCTTGACTGGTC 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 2 4 6 80 3L 982228 982246 CCTGCATCTCTATGGTCTG 57 982288 983865 TCGATCATTTCCTTGATCAGG 58 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 3 2 2 91 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196955 GTCATCGTTGGGAATTAAGGAG 59 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 1 2 2 80 3L 1285039 1285058 TCTTCCAGATACTCTACCGC 58 1285100 1287940 GACTGTCAACTAGCAGATGG 58 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 2 3 3 81 3L 1572447 1572531 CTGCTACGAAGCCTTTGTC 58 1572574 1572594 CTCCGACATAATATTGCCCTC 58 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 1 4 4 70 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 4 5 117 3L 2604269 2607702 TAACCATCAGAAACAACGTGG 58 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 1 2 2 89 3L 3372838 3372977 CGAGAGTGGTAAATTTGCAGG 59 3372769 3372787 ATACTAGGCGGCAATACCC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 1 7 13 127 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0073359 2 1 2 89 3L 4811656 4812064 AACATAACCGATGATGTTCGAG 59 4811588 4811606 CATACTGGCGCGATTAACC 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 2 2 5 181 3L 5160148 5161353 AAATGTAAAGGTTACGGCTTCG 59 5156996 5157014 AGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926 2 1 2 81 3L 7118299 7118434 TTTACACCAGCAAGGTGCT 59 7118236 7118257 TGGAAGTGAATCTTGTACTCGT 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299551,FBtr0299549 1 2 9 106 3L 7156267 7156859 TAAGCACAGCATCATCTACCA 59 7156181 7156199 GATGATACCTGGAGCGACC 59 NA Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 1 2 2 149 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328866 7328884 TAGCGATCTCTTGACCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0301611 2 2 3 89 3L 7375356 7375374 ATGACCAGGGAGTTGATGC 59 7375427 7375497 GATCGAGAATGCTTGGTGC 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 1 2 3 82 3L 7460745 7460830 CGAAATACGCATTTATGCCA 57 7460875 7460893 GGTACTGTTGTGCAAACAG 57 NA Nonspecific Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 1 3 4 91 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851 2 1 3 101 3L 7626705 7628792 CCAACTATGTCACCTCATGG 58 7628856 7628874 GTTCCTGAGTCCTCAACTG 57 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598 2 1 5 103 3L 8067832 8067850 TGCAACCGTTGAACAAACC 59 8067915 8086168 AGTCTGTCATCTTGACAGTGG 59 NA Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 1 2 2 97 3L 8126880 8126957 TACCAGAGTCAATAGCAAACC 57 8126803 8126821 TAAGCTCCAACAGATTGGC 57 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 3 1 2 227 3L 8195745 8195763 GCAACAACGTCTTCAACTG 57 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 1 2 4 108 3L 8960517 8960535 GACGGTGAAGAACATCTCG 58 8960607 8960689 GACCCGACTGTTCTTTGAC 58 NA Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 2 2 2 121 3L 9011176 9011909 GCATACCAGATCCGTTTCC 58 9011073 9011091 CTGCTTCCATAGATCGTCG 57 NA Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 2 1 1 136 3L 9129858 9129876 GAACTGCGAAAGGAACTGC 59 9129646 9129664 TAATACTTGGCAGCCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 2 2 2 82 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677484 9677505 GAAGAGATACGAGACACTCTCG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 7 8 100 3L 9817650 9817671 GAAGTCGACGATCAAATAACGA 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 2 4 5 135 3L 10567562 10567580 ATCATCTTCAACGAACGCG 59 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 2 4 4 115 3L 10865273 10865291 ATCAGCACAGTCCAGTTCC 59 10865369 10865455 CATTTCTTCGCTGTTGTCCA 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 1 2 5 121 3L 11219890 11222219 ACCTTTCGAAAGTGTGCTG 58 11222303 11222322 CATACTCGGAGGATTCACCA 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 2 4 4 80 3L 11520327 11520346 TGATCTCAAAGCCCTAGTGG 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070 1 1 2 95 3L 11883615 11883633 GCATAAATGTCCTGCGGAG 59 11881956 11883556 TAATCTCCGCGACACTTCC 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983 1 1 3 126 3L 12398255 12401223 ATATGATGGGACGGTACCTC 58 12398148 12398166 GAAACTGCTCCAGCTATGC 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 3 3 3 104 3L 12843424 12843609 GGAGAGTACATACTGCTCCA 58 12843675 12843694 GGAGGTGAGATAAATCCTGC 57 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 2 2 2 60 3L 13437396 13437476 ATTAAGCGAGATGAGCGAC 57 13437500 13437518 TTCCAAGACGCTGTGTAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 2 4 4 100 3L 13884420 13884439 TAGCTACCACTACAGCAACG 59 13884044 13884357 CCCGATAAATCTGGTGGGT 59 NA Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 1 2 2 80 3L 13954141 13954164 CCGTTTACATACAACTTAAGTCCC 59 13954201 13954290 ATATGTCGGAGTTGAGTCCTG 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 3 2 6 195 3L 14193538 14193847 CACCTCAAGATGATGACGA 57 14206248 14206266 TCGCTGTACATGTCTTCTG 57 NA Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743 1 1 2 87 3L 14310426 14359857 CTAAAGTTGAAGGTGACATCCT 58 14359905 14359923 AGTGGAAGGATCAGGAACG 59 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 1 2 2 83 3L 14583157 14583175 CAAACCAAGTATCTGGCCG 58 14577189 14583110 GAACCAGACCTTAACCTGC 58 NA Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299848 3 1 2 96 3L 15041899 15041917 ACTACCTTCTGCGTAAGCG 59 15012037 15041840 ATAGCCACCTCCTTCATCTG 59 NA Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 2 2 2 163 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113896 15113914 TACAGGCGATAGCAGATGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 3 4 4 106 3L 15486641 15486659 TTTCCTGGCACCACTAAGG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 2 4 4 81 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593967 15594347 CCAAAGAATGTTGCAATGCG 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 1 3 4 83 3L 15815227 15815245 ACTGTATCCTCGAAGCGTC 59 15815103 15815182 GCTGACAATCTTCTCATTGCT 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037 2 1 5 109 3L 15851242 15852920 GTAACACAGCGTCTTCCAG 58 15845303 15845321 CATGCCACAATTTCGTTCG 58 NA Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 3 3 4 81 3L 16376955 16377037 GCTTTACTCCCAACTTATCTTCG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414 3 1 2 157 3L 16390172 16390190 AGGACTCTTTGGTAAGCCC 59 16389676 16390054 TAGCAATGATAATTTGCTGGGC 59 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 3 2 2 81 3L 16571601 16571686 GCTACTACAAGTACATTAACACGG 59 16571543 16571563 CAATTGTTTACCAGGTGTGCA 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 3 4 12 133 3L 16890156 16890175 ACAGATCTCTTACCAGCTGC 59 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 3 4 12 133 3L 16890156 16890175 ACAGATCTCTTACCAGCTGC 59 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 3 4 12 131 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291 2 1 2 98 3L 17014737 17014808 GAGTACACTCTCGGCACTG 59 17014657 17014676 CAACTTGTCGATCTTGTCCG 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075234 1 1 4 175 3L 17394931 17399518 AGAAATGACACGAAATGCTCG 59 17394776 17394794 ATCTCCAGCAGAACCATGG 59 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 1 3 3 132 3L 17468581 17468599 TCGTCACCTACAAGCTGTC 59 17468751 17468769 AGGTATCCCACGATGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 2 3 3 133 3L 17468580 17468599 ATCGTCACCTACAAGCTGTC 59 17468751 17468769 AGGTATCCCACGATGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 1 3 3 80 3L 17873599 17873689 TCCTATAAATACGGGAATGCAG 57 17873729 17873748 GCCATGGTAGTCTCATTGAG 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 2 3 3 185 3L 18874334 18875420 AGGGTCCAGAACAAATACAC 57 18874070 18874186 AGTTGATCCACTGGTAGGG 58 NA Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 2 2 2 85 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913034 18913111 ACGATCTTGCGCTTATCCA 59 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 3 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 3 2 2 81 3L 19799485 19799505 GTCAAGTGAACAGTGAAAGCA 59 19799548 19799623 CGTATGCTTTCTTGCCTGG 59 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074850 2 1 3 158 3L 20233090 20233110 GCCGAACATGATATCGAACAC 59 20232703 20232972 TGCTTAATCTGCACTTTGTCG 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 1 3 4 104 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254039 20254057 GGTTCTGGAAGATCTGCCA 59 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179 1 1 2 131 3L 20347969 20347989 CAGGTGATCCATTACTCTGTG 58 20348082 20348417 TTCGTAGGTGTATGTGCTG 57 NA Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 1 1 1 101 3L 20403363 20403381 TTCGACATCGCTCTATTGG 57 20402672 20402690 TAATATGATCCCGGGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 2 3 3 80 3L 20989472 20989492 TTCTAACATTCGAGGAAGAGG 57 20989353 20989430 TGTCCATATGAGTGTCCCA 57 NA Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317 2 1 2 80 3L 21191192 21195856 CACTACTACAACTACGTAGCG 58 21191132 21191150 CTTCGCTTAGGGTGTACTG 57 NA InUTR Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 3 4 4 177 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200638 TCAACTGATTCTCCAGATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 3 3 3 127 3L 21612252 21612331 TTTCAGAAACAGCCGACCA 59 21612422 21612440 CATGGACAGTAATTGGCCG 59 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 3 3 3 81 3L 22281967 22281986 AGAACGTACTGCAGAAATGG 58 22282029 22282112 AACGTGTATTTGGGCTTTCC 59 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 1 3 3 142 3L 22870964 22871044 TATAAGAGCTGCACAGGAGG 59 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 3 2 3 247 3L 23093412 23093430 AATACTTTGGCAAGCCAGC 59 23095403 23095423 ATAGTCCCAATATTCATCCGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 1 1 1 90 3L 23119447 23119468 CATGCAAATTACCTGAGTTGTG 58 23119835 23119853 ACATTACCGTCACTCTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113337 2 1 21 187 3R 117787 120852 TTTCATTGGCGCTGTAGGA 59 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 3 2 2 91 3R 163947 163967 GGTGAATTCAACTTCGGACTC 59 164017 164778 ACAAAGGTATACACATCAACCG 58 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 2 2 2 80 3R 231256 231328 AGACGTACAACTAAGTCTGAG 57 231370 231388 AGCCTCTGGTAACTTACGA 57 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0273376 2 1 4 119 3R 536084 536623 GCTACTACGTTGGTTGTCG 58 536706 536724 TTCCATTGAGGCCATCTCC 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078866 2 1 4 167 3R 535916 535936 ACTATAGCCAGGTAAATGGCA 59 536064 536346 AGCCCAGATCTAATTCGTCG 59 NA Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 3 1 1 70 3R 758290 758312 CCCACCAATATCAAGTTCAAGAG 59 758480 758499 CCTACGCTCTGATATCACCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0078785 1 1 2 157 3R 1181843 1182158 ACGAAGATGATGAACCAACG 58 1182278 1182296 TAGCATGGTATGCCTGTCG 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 1 3 3 121 3R 1314884 1314902 AAACCAAGGACTTGGTGTC 57 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078686 3 1 2 95 3R 1356979 1357000 TTCTAAGACTTACGAAGACGCT 59 1357054 1357390 CACCTTCGGAATCAATATCCG 59 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091 2 1 3 82 3R 1513079 1522755 GAGCTACACGAAGTTGTCTG 58 1522800 1522818 GATGACTGAACTGCAGCTC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 1 3 12 91 3R 1586674 1587376 TTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 1 3 12 80 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586624 1586642 AAGACGCTTCTGGTACTCG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 2 2 3 81 3R 2888222 2888306 TGCCAGGAAGGTACTTGTG 59 2888351 2888369 GCTTCTCCAGGTCTTCCAG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 1 8 9 80 3R 2926906 2926926 TATGAGAAACAGACGACACGA 59 2925232 2926864 CAGATCAAGCGTTCTGCTG 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 2 3 5 180 3R 3697535 3697553 GTATACAGATGGACGCCGA 59 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 2 2 3 95 3R 4068184 4068202 GATCGTATCGCTTAAGGGC 58 4068005 4068127 CTACTGCTAGGTTGAATCTGC 58 NA Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 1 2 2 155 3R 4174326 4174345 CAGCAAGTCCTAGAAATCGA 57 4174517 4174535 ATCCAACTCCTGTCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 1 2 4 95 3R 4766833 4766853 AATCTGTATGACCTGTTCGTC 57 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 3 3 3 82 3R 5161907 5161925 TGTTCTCGCTTATCATGGC 58 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051 2 2 4 100 3R 5195422 5198486 GAACAGCAGATATCGCTCTC 58 5195341 5195361 TCGTTATTCAGCAATCGAACC 59 NA Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 1 2 2 107 3R 6522446 6522464 AAACAATTATGTCGGCGCA 58 6523358 6523376 CCTGTTTGCGAATCTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 2 1 1 113 3R 7000917 7000935 ATACAAGCACTGCATGCAC 59 7000591 7000609 TTATTGTTCGCTGAAGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 3 5 5 127 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048082 7048293 CTTGTTGATCTTGGAGCCA 57 NA Drosophila melanogaster 61 CG6764 FBgn0037899 FBtr0082403 3 1 1 64 3R 7257134 7257152 ATTCGTGCGAAATGACTGC 59 7257018 7257037 GCTTAAAGGCCTTGTGACAC 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 1 3 3 94 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595740 7595758 GTGTGACGAGTAGTCCACC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 3 4 4 76 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646919 7646937 GCTTATTGGTCCCTCTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 2 3 3 62 3R 7777164 7777183 ACCGTAAACGATGTCAATGG 58 7777208 7777456 CACCACAAGCATCAGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 Men FBgn0002719 FBtr0082661 1 1 2 85 3R 8546368 8546386 GTACTCGATCCTACGACGC 59 8545712 8545730 GACTCTGCGAATTGTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Men FBgn0002719 FBtr0082661 3 1 2 86 3R 8546369 8546387 TGTACTCGATCCTACGACG 58 8545712 8545730 GACTCTGCGAATTGTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082856 3 1 4 88 3R 9462244 9468037 ATATGACTACGGTTATGGCGG 59 9462176 9462194 TTTAGTAGGGCTGATGCCG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 2 5 5 136 3R 9476211 9476540 ACAAGGGTGACTTTGAGCA 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 1 3 5 80 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522056 9522557 TCGTAGTTTGTATCTATCCGGA 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 1 3 5 80 3R 9582734 9582909 TATCCATGATGTGCAGAATCG 58 9582950 9582969 TTCAAGTAGTCCAAACGCTG 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632 1 1 5 131 3R 9796819 9797002 TACAAGAGCCAAGATTGCC 57 9796706 9796724 TATTAACTTCCGGCAAGGG 57 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 2 2 5 81 3R 9892808 9892826 GTGGATGGTCCAGAATGTG 58 9892870 9905082 GTGACGTATGGAGTTCTTCC 58 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 1 2 4 89 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055586 11055604 AAAGATTGCCTTGTACGCC 58 NA Nonspecific Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 1 7 13 125 3R 11122321 11122339 AAATTCTTGAGAACCGCGC 59 11122428 11125014 CCAATTTACGGGCAACCTC 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 1 3 3 89 3R 11928091 11928112 AGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253 1 1 2 80 3R 11998227 12000035 ATGTTTGTCTTCCAGCTAACG 59 12000075 12000095 ATCTAGGTTCTCCATGTTCCC 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 2 4 6 80 3R 12458425 12458445 GGAGTAGTCCATCTGATCCAC 59 12458487 12461282 GTTCTCAGCATTCTCCTGC 58 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 2 3 3 108 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901810 12901828 TAAACCTCTCGCTCCTCCT 59 NA Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 1 1 1 71 3R 13508808 13508826 TATAGCCTGACGTCATCGC 59 13508920 13508938 CAGAACAATCGACTGAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 1 4 4 80 3R 13678336 13678354 ATCTGGTACGGAGTGATGC 59 13678397 13678747 CAAAGAGCATCCCAAGAACC 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083566 3 1 4 84 3R 14073861 14073945 ATGCAGGCAGAAGTAGACC 59 14073992 14074011 ATTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 2 2 2 80 3R 14112829 14112848 AGAAACTTAGCTACGGACCG 59 14112707 14112725 GAAAGGTGCCATCGTTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 1 3 3 80 3R 15070461 15070480 CTCTTCTACTACTGGCCAGC 59 15070340 15070422 CACTAGGTCATTGGTTAGTTTGG 59 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256 2 1 2 99 3R 15705942 15705961 CTATCACTACGGCGTTAGGG 59 15706023 15706613 ACACGAGAGCTTGAGACTG 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 1 2 5 148 3R 15842347 15842365 ATTAAGGAGCGAACGGGAC 59 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 3 2 2 70 3R 16417402 16417420 TTCCACAACTTCACCAGCA 59 16417286 16417307 CTCGTAAAGGACATGATGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 1 4 9 111 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 2 2 9 81 3R 16794198 16798905 GTCAACGAAAGGTTGATTTCGA 59 16798945 16798965 TGACGAAGTACACAAAGAAGC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084078 3 1 22 92 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17196356 17200793 AAATCAAACCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 3 3 3 84 3R 17449362 17449568 GGGATTATTTCAAACGCCCT 58 17449297 17449315 ATATTCAGGCTGGGACTGC 59 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0299852 1 1 2 80 3R 17594575 17594595 GAGAATCCTGACTTGGTTCAG 58 17594636 17594741 GTCCCGACCAACTTTATACG 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0084184 2 1 2 89 3R 17856415 17856439 CAAGTATCCAATCTATGATTGGTCC 59 17856293 17856368 GGGAAGAAGGGATTGTCGT 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 2 5 5 60 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18184313 18184331 GTCGAATGTAGTGAAGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 3 2 3 187 3R 18878911 18879088 ACAAAGAAAGCACTGATTCCG 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 3 2 2 129 3R 19198715 19198787 AAATGAACCTTTGCACACCA 58 19198879 19198897 TCGATAGCCAGGATCACAG 58 NA InUTR Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 1 1 1 99 3R 19229342 19229360 ACTTCTACGGCACTCAGAC 59 19229208 19229229 CATTGTTATCCATGTCATAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 1 2 2 149 3R 20446822 20448648 TAAGTTCCACGGAGCTCAC 59 20448761 20448779 AAAGGTGTCTCCTCGATGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 3 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527819 TGGTGTTCATCTAAGTCATCGA 59 NA Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 3 2 2 83 3R 20607106 20607179 GATGACTTCGCTAACGTGG 58 20607226 20607244 AAACAGATCGATGTCGTGC 58 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 1 2 3 95 3R 20677423 20677568 GAGCAACTATTGCTCAAGGAG 59 20677625 20677643 TCTGATGGGTGCCATTCAG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 3 3 3 85 3R 21511212 21511298 AACTATTTGGATCACCCAGCT 59 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 2 3 5 90 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711698 AAGAACATGATGAGCAGTGAG 58 NA Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 3 2 2 80 3R 22095467 22095486 ATCAACCACATAAGGGAGGT 58 22095528 22095681 TTTGGGCACTAAGTTGACTC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 1 10 10 80 3R 22393078 22393208 ATTACACAGAAGGGATACTCCG 59 22393249 22393267 AAGATTTCACTGGCCTGCT 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 2 10 10 91 3R 22400427 22400445 TTTCATATCCCGCATCACG 58 22400500 22400588 TATCGTTGCCGTTAATCGC 58 NA Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 2 2 2 122 3R 22702880 22703272 GCACTACAGAAACTTTGTCGT 59 22702778 22702796 TAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 3 2 12 96 3R 22892108 22892126 TAAAGAGCACAATCCCTGC 57 22891940 22892048 GAATCGCTCGTCTGAAAGG 58 NA Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 2 2 2 110 3R 23094416 23094503 TTTCTGGCACCACATTTCTG 59 23094325 23094343 TTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 2 5 5 124 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102110 23102128 GATTTCTTCAGCACTCCGT 57 NA InUTR Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 3 4 4 196 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463958 23463977 CATTTCGAGGTGACGTTCTC 59 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 2 4 4 190 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463952 23463971 GAGGTGACGTTCTCAAAGGA 59 NA Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 1 1 2 94 3R 23484258 23484276 TGAGAGCTTGGATGACGAG 59 23483827 23484200 GGACGAACTGAGAGTAGGG 58 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 1 5 5 126 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 2 3 3 80 3R 23765355 23765434 CCATTACCTTCGAAGGTACTG 58 23765474 23765494 CCTCGATGGAAAGAATTTGGA 58 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 3 3 3 81 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765496 ATCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324 1 1 6 105 3R 24638553 24638691 CAGATAGAGGATGACGCTG 57 24638760 24638778 TGACATTGTCACTCTCGTC 57 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 3 2 2 135 3R 25323834 25323855 GGGCCTGCTTAAGTTTATACAG 59 25323949 25324037 GCCCATAACAATGATCTTGCA 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 1 3 4 80 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327143 25327161 TGGCCGTCATTAGATCCAG 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 1 4 5 81 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 2 2 2 96 3R 25826679 25826757 GTGCATATGGATCACGATAGC 59 25826815 25826833 ACATGGTCATGGTACCGTC 59 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 3 2 2 81 3R 25844464 25844482 TTCAGACGCATCCTAACGA 58 25844344 25844419 GTGATCAGAGCTTGCTCCT 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 1 4 5 81 3R 25857057 25857154 CCATCTACAGATTCTTGCGC 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 3 2 2 84 3R 26004019 26004037 AAGATGTTCCGAAACGTGC 59 26004085 26004169 GGATCTGGTACTCTCCAGG 58 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 2 2 3 136 3R 26134962 26183983 CAAGTCAAGATTGAGGACGAG 58 26184081 26184099 TAGCGATCGAATACGAGCA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0113483 3 1 12 81 3R 26398781 26399969 CAACATCGACAGAATCTTCCG 59 26400012 26400030 CTCAATCTCCATGTTGCCC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 3 6 12 140 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397643 26397663 CCAGTATGGTTATCTCCTCGG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 1 5 13 98 3R 26419560 26419842 ACGCCTAGAAACTCTACTCC 58 26419481 26419499 GACCTTGACAATGTGCTCC 58 NA Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 2 2 2 230 3R 26520393 26520480 GGATTTGCCAAGAAAGTGGA 58 26520182 26520203 ATAACTGGGCATCTTATAGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 2 2 2 62 3R 27421798 27421816 TCAACTCCTACCTGAAGGG 58 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 2 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 2 1 1 63 3R 26038648 26038668 GTTTGCTTTCATCATCCTGAC 57 26038693 26038711 TATATCCGTCAGCCAACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 3 2 2 96 4 330248 330328 GTATTGCAGCAGATTGGTCAG 59 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089128 1 1 2 198 4 399187 399360 GCGTACACATACATCGAAGG 58 398815 399026 AAACTGGGATGAGGCTGAG 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 2 6 7 82 4 470583 470875 AAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 3 2 3 105 4 660290 660309 TAATCCTATCGAGAACGCAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 3 2 3 105 4 660290 660309 TAATCCTATCGAGAACGCAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 3 9 9 80 4 1068498 1068518 CCAGGATATCTGTCTCCTGAG 58 1068345 1068457 AAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 2 4 4 87 X 423499 423517 AGTTCGCCAAGAACTTGGA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0070191 2 1 2 80 X 818944 819019 TGAAGGCAATATAGGAACCAC 57 818884 818905 CTAATGTCGCAGAAATCTTTGC 58 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 1 3 3 93 X 1376770 1376788 TCAACATCCTCAACCTGGG 59 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 1 5 6 91 X 1383539 1383557 ACCATCATCTCAAGGAGCG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070262 1 1 9 86 X 1531148 1531166 AATATCGATCCCTCAGCGT 58 1531360 1536928 CGTCAGTTTACCTTGAGGG 57 NA Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 3 1 1 174 X 1587254 1587272 TCACGTCTCGTGAGTTTCC 59 1587471 1587489 AAGTCATGGGATCCTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0302028 2 1 4 80 X 1643846 1643960 CTCTGGATACTCAAGGAGGG 58 1643785 1643805 CATAATTATCGCTTGTCCGGA 58 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 1 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643805 CATAATTATCGCTTGTCCGGA 58 NA Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 3 2 2 112 X 1754005 1754097 GCTGACCATTAACTGCTGG 58 1753911 1753929 GAATGACAATGGCCACGTC 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 1 2 3 80 X 2235010 2235028 CCCGCGAGAATATTGATGC 59 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 3 2 3 98 X 2234992 2235011 AGTTGGTCAAACATGTGACC 58 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 3 3 3 69 X 3603910 3603929 GTTTCCTTTGCGTCTTCTCC 59 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100 3 1 2 103 X 3799925 3800250 AACTGGCAGTCGTAGTCTG 59 3799840 3799858 GGGTGTACGTGTAATCCGA 59 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 2 4 4 82 X 4972206 4972224 CATTCATCATTCGACCGGA 57 4972051 4972161 GCGAAATAACACCTGTTTGC 58 NA Nonspecific Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809 3 1 2 101 X 5650177 5650195 CTTTGACCTGGACAACACG 59 5651915 5651935 TCTTTGCTGAACTGGTATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 2 4 6 124 X 6456387 6470831 ATAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 1 6 7 172 X 8131041 8131059 TCAGTCGTTCCAGCATCAG 59 8131194 8131275 ATAAAGGATATCCCGCCTCG 59 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 1 2 3 102 X 8381363 8381381 AAACGGAGATGTACACGTG 57 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 2 2 6 83 X 8478889 8478907 CATCATCTACTGCTACGGC 57 8478954 8479858 GATTCCTCGAGCGAAACTG 58 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 1 4 6 116 X 9005031 9005127 GAGCATGGATTTAATCCAGCC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 1 1 1 64 X 9103493 9103511 GAAGAAGAGCTTCACCTGC 58 9101086 9101104 AGATGAAGGCACCTTTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 3 1 1 99 X 9503645 9503663 GAGAAATCAGGAGGTGGCA 59 9503794 9503812 TTCCCTGGTCTCCTTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 1 3 3 80 X 9955175 9955259 AGCACGATAGTTCAGACTGG 59 9955114 9955134 CGCAAAGCATACGTAGATTCC 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300512 1 1 8 120 X 10180571 10180591 CCTTGTCCTCAATTGTATCCG 58 10173214 10180490 TGTTCCATCATCTTGACGAC 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 3 7 15 109 X 11275916 11275936 TATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 1 4 15 93 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299368 11299386 TCCCAGAATAATCACCGGG 58 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 2 2 2 89 X 11349144 11349162 CGCCGCAAACTATTAATCC 57 11349215 11349323 CCAGGAGGTCATTTACGTC 57 NA Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 2 2 2 80 X 11616427 11616571 GAGGAGCGATTTAAGATCGC 59 11616614 11616632 CGTACGCTCTACAACTGTG 58 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114452 3 1 2 87 X 11777191 11777212 ACGTCTGTTAAGAACTAGTAGC 57 11775927 11777146 TCTGTATGTCCTTGATTTCCAC 58 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 2 4 4 98 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910898 TACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 1 2 2 120 X 12370016 12370191 TCAATATGATCAGAGGTGGCA 59 12370273 12370291 ATTACACTCTCGCCGATCG 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 3 2 5 89 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483122 12483141 GGACGAATCACTAACTGGTG 58 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 1 4 4 81 X 12550119 12550138 TGAACTATTGTCGTAGCCTG 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 3 2 2 219 X 12661317 12661335 ATCGTGTCGTTCAACTCGA 59 12663854 12663962 AGATGTTGAACATGCCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 2 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 2 2 5 80 X 13544085 13546916 CGATACCTGTATCAAGATCGC 58 13546958 13546976 AGGACGCCGATATTAGGTC 58 NA Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943 1 1 2 149 X 14485111 14496503 ACGCCAATGGACATAATGTG 59 14484981 14484999 TTGAGCCATTCCTCTCCAG 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 1 2 8 96 X 14818434 14819687 CAAGATCATGAAGTCATCTTCG 57 14820825 14820843 CTTTCCAAGGAATTGCTCG 57 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 2 2 5 90 X 15265709 15266193 CGTCAGAATGGTGATATCTTCG 59 15265640 15265658 CTTGGTGCTTCTGGATGTC 58 NA Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 1 3 3 151 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377352 15377370 CTCTTTCTCGTTCCTTGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 1 2 2 80 X 15601087 15601170 ATTAATCAGGTGGCTGAGGA 58 15601026 15601044 CTTGTAGTCCAGAATGCCG 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 3 2 2 80 X 15686611 15686630 GAGAAGTTCAGACTGCAAGC 59 15686672 15686755 CTTCGAAGATGCTTCTACCG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 2 5 9 133 X 15714507 15714525 GAACCAGGAAGCAAGTCAG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 3 3 3 80 X 15859156 15859174 CACTTTCATCGCACATCGT 58 15859023 15859115 AAGAAGTTGTGAATTGAGCTCC 59 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 3 3 3 149 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888312 15888393 TTGGTGTAATGGGTCTCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 1 2 2 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074369 2 1 7 285 X 16588401 16588668 AGCACTAGATAAGCATGTTGTC 58 16588137 16588155 CATCGTGCTTATGACGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 1 2 2 80 X 16778987 16779005 AAGTCCCAAGAGATCCTGC 59 16779047 16779126 TTTATTGTCGTCGATGAGCAG 58 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 2 2 2 81 X 16778984 16779004 CTAAAGTCCCAAGAGATCCTG 57 16779047 16779124 TATTGTCGTCGATGAGCAG 57 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 2 3 4 80 X 17022884 17022904 AGCACAAAGATCTTTGACAGC 59 17022946 17023196 AATGACCTGATGACCCTGC 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 1 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 2 5 6 117 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836 2 1 5 125 X 17629184 17629202 GATGAACACCGATGTGGAG 58 17629291 17630243 GACTTGTACTCACTCCTGC 57 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 2 3 4 113 X 17743836 17743951 ACTTGAACAAGTCCCTGGA 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 3 3 4 114 X 17743837 17743952 GACTTGAACAAGTCCCTGG 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089657,FBtr0089662,FBtr0089663 3 4 8 109 X 17847372 17870394 GATGGTTACGGGTCTTTGC 58 17847281 17847300 TCATGATCGTGAGGAATGGG 59 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 3 3 8 99 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824460 17824628 CAAATGTTGACCTAGTGCACC 59 NA Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 2 2 2 81 X 17992535 17992626 CAAGCTGTGAATGATATACCTACAC 59 17992478 17992496 GACGTTCCAGCTGAAAGTC 58 NA Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 2 2 2 132 X 18201378 18201396 CAACTGGATCGACTATCGC 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074571 2 1 6 80 X 18286940 18298033 GAGAACTTGGTCACAGAGTG 58 18286879 18286898 TGTAGTCCATATCGAAGCCA 58 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 1 2 4 112 X 19040166 19044852 GAGGACATGATTGTGCCAG 58 19040072 19040090 GAGACGCTCTTATAGCGCT 59 NA Drosophila melanogaster 61 pcm FBgn0020261 FBtr0074784 1 1 2 156 X 19380364 19380448 TTGAAATTAAGCCGGCTGC 59 19380158 19380178 GGCAGTATGTATTCCAAGTCG 59 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 2 4 4 80 X 19465725 19465818 CTAGGTTTCAGCACTTTATCTCTG 59 19465668 19465688 CATTGAACCAGACAGACTTCC 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089405 2 1 13 98 X 20105914 20105932 AGGCTACGAACATTCCACC 59 20101677 20105853 CATCAAATGCAAGCACATCG 58 NA Nonspecific Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 2 2 2 139 X 20293017 20293099 AATTACTGCTATCGCTGCG 58 20292896 20292914 AGAAAGTAGTCCGCCTGAG 58 NA Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 3 2 2 174 X 20540299 20540319 GTCGAAATTCGACAGATTCCG 59 20540455 20541712 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 2 5 5 80 X 20644230 20644249 ACGCTAATATACAGGGTGGT 58 20643791 20644187 ACGCACTAACCTAAATCGC 58 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0113007 2 1 2 88 X 20907654 20908644 GAAGACTACAGACCGACGA 58 20908696 20908714 GTGCTGCACAAAGAAACTG 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827 3 1 3 83 X 21004475 21004493 CAGAGATCGATGCAATGCC 59 21004616 21004855 GTTTGCAGTATTTAGTTGGCCT 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 3 4 4 111 X 21313528 21313547 GATTGGTGGGATTAGGAACG 58 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 3 5 5 97 X 21473853 21474023 TAATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 1 5 5 80 X 21473852 21474021 ATCTATGGTCATGGAGCGC 59 21473790 21473808 CGACGTTTGAATGTCCACC 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299522,FBtr0299523 2 3 5 91 X 21900448 21904482 AGAACCGGATAGCCAAGTC 59 21904536 21904555 CAATACTGTGTCTTTGGCGA 58 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684 3 1 3 163 XHet 23168 25000 TGGTTATGTGATGAACACGC 59 25123 25144 AATTCTGCCGGATATTTGATGG 59 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 1 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 Sfp33A4 FBgn0261056 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:22BCa FBgn0011859 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-6-1 FBgn0046819 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31242 FBgn0051242 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:D:96A FBgn0011845 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32546 FBgn0052546 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-303 FBgn0067702 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113717,FBtr0302542 2 2 3 68 XHet 71069 71087 CAGGATATGCGCAGTTTCG 59 69218 71037 TAGTATCGTCGGATCTGGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684,FBtr0113683,FBtr0113682 1 3 3 80 XHet 22990 23083 GCATATTTACTCAACCGACCA 58 23125 23143 GCGACGCTATAGCTATGAG 57 NA Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 1 3 3 94 X 11985772 11985853 AAGACTGAGAAACGCACAC 58 11985911 11985929 TCCTCTTGTCCAATGGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 3 3 5 138 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887886 21887904 CAATCGGCGATGTTTGAGG 59 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274 3 1 3 94 X 20804408 20804428 CCCAATTTGAGAATGGTCAGG 59 20804277 20804352 CAGAATGCCCAACTTCTGC 59 NA Drosophila melanogaster 61 CG15459 FBgn0031108 FBtr0077329 2 1 1 190 X 20284592 20284610 GGAGCTATAGGCAGAACAC 57 20284251 20284270 GTACACGATGAACAACAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33498 FBgn0053498 FBtr0089611 2 1 1 62 X 20096955 20096973 CATCAAGCACGAGATGTCC 58 20096829 20096929 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33498 FBgn0053498 FBtr0089611 1 1 1 100 X 20096993 20097011 GAGTACAAGGAGCTCTCCG 59 20096829 20096929 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG33487 FBgn0053487 FBtr0089464 1 1 1 100 X 20089133 20089151 GAGTACAAGGAGCTCTCCG 59 20088969 20089069 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG14218 FBgn0031031 FBtr0074770 2 1 1 80 X 19474954 19475038 CAACCTACTGATACCTTCTTTAGG 58 19474897 19474916 AACTAAGTCTCCGCTGTCTG 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074720 2 1 8 156 X 19400257 19400520 ATTGTAGCTACCTCCAGCA 58 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA InUTR Drosophila melanogaster 61 CG12200 FBgn0031018 FBtr0074710 3 1 1 60 X 19369436 19369456 CAAGATCTCCAAGTTCCAAGC 59 19369478 19369496 CTGACGGTAGAAACCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hs3st-B FBgn0031005 FBtr0074676 1 1 1 80 X 19143293 19143312 GGTCTACTTCTCCTACAGCT 58 19143354 19143788 AGATTGCGTAAGTTGCTCTG 58 NA Drosophila melanogaster 61 CG7889 FBgn0031003 FBtr0074675 3 1 1 108 X 19137817 19137836 CTATCCGGTGAACAAGATGG 58 19137972 19137990 ATAGCACTGGTTCATCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659 2 1 4 222 X 18690536 18690557 GACAGGCAATTTCAATTCAGAG 58 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6696 FBgn0030947 FBtr0074611 2 1 1 127 X 18555700 18555771 CAAGACTTCAACGCCAACC 59 18555591 18555609 TAGTTGCCCTTGATGAGCA 59 NA Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074584 1 1 2 80 X 18153250 18153269 CAGAATGGGTTGTGAAATGG 57 18153126 18153207 ACGAGATTGTTCTTTCGGG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 3 8 8 84 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844724 17844743 GAATGATGGCGATTATGTCG 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0300976,FBtr0300979,FBtr0300975,FBtr0089800,FBtr0300977 1 6 6 91 X 17794326 17794655 GACTCGTTGAATTTCGCCC 59 17794710 17794728 TTGATGATCGGCTGTAGGG 59 NA Nonspecific Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 2 4 6 87 X 17165361 17165379 ATCACGGAGCCAAATTGTC 58 17165430 17165531 ACATTCAGGCACTCAACCT 59 NA Drosophila melanogaster 61 CG12995 FBgn0030826 FBtr0074402 3 1 1 76 X 17103958 17103978 TGAAACTGATGATCCTTCTGG 57 17103902 17103921 ATTGGAGGACACATCATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302377,FBtr0302376,FBtr0074386 3 4 4 76 X 17028864 17028884 ACTCTGATAAATCGGAGAGGA 57 17028987 17029007 CAGATGATCCAGATACACCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4955 FBgn0030814 FBtr0074382 1 1 1 60 X 16976651 16976671 TACCTTCCTATTGGAGGTCCT 59 16976763 16976783 AAATGTTATCGTGCAGATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4880 FBgn0030803 FBtr0074342 3 1 1 104 X 16781434 16781664 CACCAATGAGGCAATCGTC 59 16781731 16781750 AGTGTATTCACGTTCTCGGG 59 NA Drosophila melanogaster 61 CG15865 FBgn0015336 FBtr0074375 3 1 1 197 X 16558034 16558053 CTGAACCAATTGCTTCTGGG 59 16557727 16557874 TGGACTCTTCGAAGATGGC 59 NA Drosophila melanogaster 61 CG9902 FBgn0030757 FBtr0074296 1 1 1 80 X 16439093 16439113 CATGATAAAGCAGAGAAAGCC 57 16438946 16439053 GTCTTCCGAAACTTCATACCA 58 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280,FBtr0074279 1 2 3 87 X 16344525 16345316 GATAGTAGAGATCGGCCGG 58 16345367 16345385 GATCCCGATCCTGGTTACG 59 NA Drosophila melanogaster 61 disco-r FBgn0042650 FBtr0074251 2 1 1 126 X 16015084 16015310 ATACTGGAGGTTGGCATCC 59 16014976 16014994 GCGGCATGCTATCAATCTC 59 NA Drosophila melanogaster 61 disco-r FBgn0042650 FBtr0074251 1 1 1 124 X 16015084 16015310 ATACTGGAGGTTGGCATCC 59 16014978 16014998 GGCATGCTATCAATCTCATCG 59 NA Drosophila melanogaster 61 CG8928 FBgn0030711 FBtr0074132 1 1 1 80 X 15839294 15839313 ACCTTGTGTACTTGAACAGC 58 15839355 15839442 GCATCACAGCATGATTTGAG 57 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112 3 1 2 74 X 15762244 15762262 ATCACAGTCGATTCCTTGC 57 15762371 15762392 TCCATTGATACCAATCTTCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 CG8117 FBgn0030663 FBtr0074050 2 1 1 61 X 15538637 15538655 TTCAGGACTCGATCAATGC 57 15538680 15538698 GAACTGATCCGTCTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9213 FBgn0030655 FBtr0074071 2 1 1 80 X 15467257 15467330 TTAAGCAAATGTTCGAGCGG 59 15467196 15467214 TGTGCTTGGACACAATGTC 58 NA Nonspecific Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 3 3 3 209 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377410 15377428 CTCCTATGACTCTGCTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG6227 FBgn0030631 FBtr0074011 3 1 1 127 X 15241252 15241270 ACTTCTATGTCGAGGTGCC 59 15241360 15241520 CTGTGCCCAAGTCTTAATGG 59 NA Drosophila melanogaster 61 dob FBgn0030607 FBtr0073961 3 1 1 61 X 14961655 14961673 TTCATTCCCGGACTGTCTG 59 14961926 14961946 CCATCCATATAGCGAACTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5548 FBgn0030605 FBtr0073960 1 1 1 178 X 14958008 14958092 ACAATTTACGATGGGCAACG 59 14958233 14958251 AGTAGTCGCGGAATTCCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 dpr8 FBgn0052600 FBtr0073913 2 1 1 81 X 14347057 14347078 CATCAATCTGACTTGCATTGTG 58 14347118 14348102 ATTTATGATCTCGCGGTTGTG 59 NA Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 3 1 1 99 X 13650529 13650617 TGAACATATCATCAAGTGCCC 58 13650450 13650469 CTTGGCATCACTTTCCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr12A FBgn0030494 FBtr0073784 3 1 1 90 X 13438038 13438058 TACTATGCCTATCGGATGACC 58 13438110 13438535 GCGTGATCGACTGATTCTG 58 NA Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 1 2 2 102 X 12670825 12670913 AAACTGTACCAGGAACGCA 59 12670741 12670759 GCATTATGGTGGACATGGC 59 NA Drosophila melanogaster 61 CG15730 FBgn0030395 FBtr0073667 3 1 1 60 X 12388631 12388652 ATGTCAGATCCAGTTCAAATCC 58 12388592 12388610 GCCATTACTTCGTCCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15927 FBgn0030389 FBtr0073647 2 1 1 60 X 12349070 12349089 CGATCATCGCGTTACATTGG 59 12349111 12349130 GTTGCTTAACCTTTGGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 1 1 1 70 X 12271382 12271401 GAGACTACCTGGGAGTACAC 58 12271222 12271349 AAGATGAAGACCTGGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11356 FBgn0030375 FBtr0073635 1 1 1 80 X 11997078 11997219 GATGTAAATATGCAGGTTTGGC 58 11997019 11997039 ACGATGTCTATGAACTTGAGC 58 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0100305,FBtr0073584,FBtr0073587,FBtr0073586,FBtr0100304,FBtr0073588,FBtr0100303,FBtr0073585,FBtr0100302 3 10 10 80 X 11833143 11833735 TCCAAGAGGTTCATGGTCAG 59 11833082 11833100 CTGCGAGACAAATGACCAC 59 NA Drosophila melanogaster 61 CG10352 FBgn0030348 FBtr0073599 3 1 1 81 X 11769958 11770040 AAGGGTGAAATCATAGGACCT 58 11769897 11769915 GTTTGCCCAAGGTTATGGG 59 NA Drosophila melanogaster 61 inaF-D FBgn0260812 FBtr0301267 2 1 1 179 X 11622703 11622721 GTCCTTTGCGTTTCACTGG 59 11621318 11621336 GTGCTTGTAGAACTGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 nod FBgn0002948 FBtr0073516 3 1 1 181 X 11475066 11475150 ACGGAAAGTCGTTAATAGTGG 58 11475293 11475311 CATTGAGTAGCTCTTGCCC 58 NA Drosophila melanogaster 61 CG32667 FBgn0052667 FBtr0073474 3 1 1 172 X 11034102 11034121 ATCAGTTCAAGACCGGAGAG 59 11033883 11033901 GTTGAACTTGGGACAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073406 3 1 3 86 X 10769331 10769349 AGTTTATGCGGCAGATCGA 59 10769193 10769283 TCGAGAAGTTGAACTTCTCCT 58 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 2 2 2 82 X 10674283 10674302 CAACTTGGCCAACGTAATCC 59 10674144 10674241 CGAGGAATACCGATTTGTACAC 59 NA Drosophila melanogaster 61 CG32681 FBgn0052681 FBtr0071466 2 1 1 60 X 10271624 10271642 GTACCAAGCACCTTGTCAC 58 10271582 10271601 ATCAACCTGATCTTCCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS28b FBgn0030136 FBtr0071360 3 1 1 107 X 9448856 9448874 TATCCGAAACGTGAAGGGA 58 9448945 9449030 GTCTTCTCGAGTTTGGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34026 FBgn0054026 FBtr0100081 2 1 1 101 X 9427967 9427986 GCAGATGATTACCAATTGGC 57 9428050 9428129 ATTTAGGTTGTCCGACTGC 57 NA Drosophila melanogaster 61 Zpr1 FBgn0030096 FBtr0071342 3 1 1 115 X 9055408 9055429 CAATAGTTTCATCGAGAATCCC 57 9055200 9055218 CGTGATTCTGCTCGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9034 FBgn0040931 FBtr0071343 3 1 1 147 X 9053866 9053943 TTTGTGTACCAAGATGTCCG 58 9053738 9053756 ATAGTAGTTGGCCACTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2004 FBgn0030060 FBtr0071281 2 1 1 120 X 8607725 8607743 CTAAGAAGCCCTTCGTGGA 59 8607430 8607642 TAGTCTTGACGTACAGGTGC 59 NA Drosophila melanogaster 61 Hexo2 FBgn0041629 FBtr0071249 3 1 1 183 X 8605974 8605993 ATTGTGTCCACGAAGAATGC 59 8606138 8606227 AGATTCGGGATTCCAGTGAG 59 NA Drosophila melanogaster 61 Tbh FBgn0010329 FBtr0089999 2 1 1 80 X 7916782 7916858 GATTTGCGACTCCATGAGG 58 7916902 7916920 GAACTGGTGATCCTCCAGG 59 NA Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071136,FBtr0071135 2 2 2 124 X 7794913 7794932 GATATCCTCGGTGACGAGTG 59 7794295 7794313 CCCTTCTTCAGGAGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11369 FBgn0029951 FBtr0071067 1 1 1 60 X 7469892 7469912 CCCAGATTAAAGCCACATCAC 59 7469933 7469952 TACCACGGAAAGTTTACCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32733 FBgn0052733 FBtr0071001 1 1 1 60 X 6846781 6846799 GTTACCTCACTGATGCTGG 57 6846823 6846841 CAGATCCAGCCTGATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3198 FBgn0029887 FBtr0070991 3 1 1 121 X 6567590 6567681 GAGGATCCGGAGTTCTGTC 59 6567487 6567505 TAGAGATGTCGGGCTTCCT 59 NA Drosophila melanogaster 61 CG33669 FBgn0053669 FBtr0302419 1 1 1 80 X 6294003 6294082 GATTCTTGACTACTCCGAAGC 58 6293943 6293962 TTCTTAGAACGGGAAAGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34435 FBgn0085464 FBtr0112736 2 1 1 85 X 5508288 5508306 CAATGAATGTGACCAGGCG 59 5508162 5508180 CATCCGTCATCCGTATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2941 FBgn0029686 FBtr0070613 1 1 1 172 X 3830965 3831036 CTGGAGTGGAAACGATGAG 58 3831172 3831190 ACTGGATATCATCGTGTGC 57 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290005 2 1 2 117 X 3453210 3453230 CTCATCATTCGAGTATCGGGT 59 3453308 3463862 CATTTATCGAAGGCGTCCTC 58 NA InUTR Drosophila melanogaster 61 CG17959 FBgn0029647 FBtr0070557 2 1 1 60 X 2841514 2841532 GATATAGCGGTGTCCGGAG 59 2841552 2841574 GGTATTAGGTAGTACTCCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 1 1 1 249 X 2627203 2627281 CATTTGCGGCAAACAACTG 59 2627494 2627512 CTGTAGGGAGGGATTGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8310 FBgn0040377 FBtr0070450 1 1 1 218 X 2473970 2474043 GGCAAGATCATTGAGACCA 57 2473770 2473788 CAACTCATAGGTGTCCACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32801 FBgn0052801 FBtr0070355 2 1 1 63 X 1796688 1796707 TAGATCTAACCGGCACATCC 59 1796485 1796662 TAGCGGATGAACTTGGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14806 FBgn0029594 FBtr0070313 2 1 1 121 X 1774644 1774721 TTTCCAGTTCAGCCTACCG 59 1774805 1774824 TATAGTCGCACTTCACCGTC 59 NA Drosophila melanogaster 61 CG14795 FBgn0025393 FBtr0070285 3 1 1 88 X 1406507 1406525 CAAGCTGCGTAAACAGGTG 59 1406382 1406455 GCGTCTTCACTGTGATCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14780 FBgn0025383 FBtr0070257 3 1 1 136 X 1366842 1366922 CTGTACAACAATCAGAGAAAGC 57 1367019 1367037 CTGAAGGTGTGCATGTAGG 58 NA Drosophila melanogaster 61 O-fut2 FBgn0027791 FBtr0070296 1 1 1 60 X 1358892 1358910 ACATGACCACAGTGTTCCT 58 1358850 1358869 TCCTTTAGTTCCATCAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3021 FBgn0040337 FBtr0070173 2 1 1 92 X 921570 921680 CATACAGGAGTACATCACTTCCA 59 921732 921750 GTCCATTGATGGATGCCCT 59 NA Drosophila melanogaster 61 CG14635 FBgn0029535 FBtr0070142 3 1 1 62 X 738871 738890 TGTGCTCTAGTTTAAGCGAC 58 738915 738933 AATCCGTGTCGGAATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13358 FBgn0026874 FBtr0290198 1 1 1 74 X 698029 698118 CTTCCGTCCCAGATTTGGT 59 697973 697991 ATGATTTGGGAAGAGGGCA 59 NA DesignRelaxed Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 1 2 4 180 X 516160 516242 CCAGGTGGAGATTATATCAAGAG 58 516381 516475 AAGAAGCTCCCTGATATGCT 58 NA Drosophila melanogaster 61 CG3156 FBgn0023536 FBtr0070079 2 1 1 80 X 383448 383528 CTTTGGATTGACTGGCTTCTG 59 383566 383588 GAGTCTTGTAATACCAAGGTTCC 58 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578,FBtr0100581,FBtr0100580,FBtr0100577,FBtr0100579,FBtr0100582,FBtr0089442,FBtr0089441 3 8 8 81 X 167418 167516 ATGACAAACAGAAGATCAGCTG 59 167358 167376 AGATCCTCCCTTCCATGGT 59 NA Drosophila melanogaster 61 CR41609 FBgn0085819 FBtr0114277 3 1 1 176 U 4571205 4571223 CATTCCTGCGTAGTACGAG 57 4571361 4571381 GGTTTAGAAGGCATACAATGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR41533 FBgn0085673 FBtr0302348 2 1 1 62 U 7761380 7761400 TTTCTGTGAACGAGTGAACTG 58 7761338 7761356 CCATCTGGACCAACCTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 3 7 7 86 4 1078308 1078329 CAGGACAAGAAGAAACGATCAG 59 1078183 1078261 GTAAGAGCCCACAGTCCTC 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 2 6 6 100 4 974715 974733 AGAAATCCGGTGGTCACAG 59 974513 974653 TGCGAATGCAATTCTTGAGAG 59 NA Drosophila melanogaster 61 CG11231 FBgn0039939 FBtr0089242 2 1 1 60 4 820288 820306 TGCTTGTCATCGAATCGTC 58 820330 820348 GTGTTCCAGAACATCGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zfh2 FBgn0004607 FBtr0089070 1 1 1 80 4 551652 551671 GACGCCGATGTTAAGTACTG 58 551708 551794 CTTCCTGAAACTTCTCTTTCTACTG 59 NA Drosophila melanogaster 61 Or85e FBgn0026399 FBtr0081896 3 1 1 189 3R 4460652 4460825 TAAATGGCCTGAGTTCGCT 59 4460481 4460499 AGAATGAAGCGATGCAAGC 59 NA Drosophila melanogaster 61 snRNA:U1:82Eb FBgn0004183 FBtr0078851 2 1 1 60 3R 773853 773871 AACTAGTTCTAGTTGCGCC 57 773811 773832 GTAAGTATGCTTTGCTTAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mod FBgn0002780 FBtr0085874 1 1 1 80 3R 27879207 27879227 AGTAAAGGTTGGCAAGATTCC 58 27879267 27879354 TGGAGATACTCGTTTGGTAGG 59 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085851 1 2 3 96 3R 27636788 27636806 TCAGACGAATCCCTACAGC 58 27636651 27636731 CTTAACATAGCCCTTAATGGCA 58 NA Drosophila melanogaster 61 CG1890 FBgn0039869 FBtr0085836 3 1 1 88 3R 27569552 27569626 AAGAGAAGACTGCAGAAGGA 58 27569673 27569695 GCCTTCTTATACGAATCTGTCTC 58 NA Drosophila melanogaster 61 CG1890 FBgn0039869 FBtr0085836 1 1 1 87 3R 27569552 27569626 AAGAGAAGACTGCAGAAGGA 58 27569672 27569694 CCTTCTTATACGAATCTGTCTCG 58 NA Drosophila melanogaster 61 CG34046 FBgn0054046 FBtr0100101 2 1 1 60 3R 27535056 27535074 AAGCAAGGCTCATACACTG 57 27535095 27535186 ACTTGTAACTCCATAAGCTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742,FBtr0085743,FBtr0085744 1 3 3 91 3R 26884319 26884337 ACAAAGCCATAAGCGACTG 58 26883635 26884264 GATTTGCGTTGCCTTTCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33773 FBgn0053773 FBtr0091774 3 1 1 99 3R 26861295 26861316 GAGAACTGCAACTTAAAGTCCA 59 26861373 26861463 TGAAATTTACCTTCATCCTCGG 58 NA Drosophila melanogaster 61 PH4alphaMP FBgn0026190 FBtr0085689 2 1 1 80 3R 26318055 26318133 TTTACTACCTAGCTGATGTAGAGG 59 26317998 26318017 TTCCTCTTTCTGGAGTCACC 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 1 5 5 81 3R 26289005 26289024 TCTGCTCTATGACATCTCCA 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 2 4 4 166 3R 25617433 25617517 ACCGATACTTCAAGTGCCC 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG7582 FBgn0039681 FBtr0085464 1 1 1 109 3R 25506931 25506949 AAGGATCCTCAAGGAGAGC 58 25506778 25506859 CGACGGTATTCCTTCTTGAG 58 NA Drosophila melanogaster 61 CG1907 FBgn0039674 FBtr0085447 1 1 1 110 3R 25445364 25445454 CTAGACTTGGTCAAGACCCG 59 25445527 25445545 CAGAGGTCCTTCCTTGCTC 59 NA Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085433 2 1 2 81 3R 25318463 25319180 GATATCGATAAACATACTCCTGCG 59 25318405 25318423 GTAGAGTAGGGACAGGGCT 59 NA InUTR Drosophila melanogaster 61 CG1523 FBgn0039601 FBtr0085355 1 1 1 60 3R 24644523 24644541 AGATCTGTGCGGATTCAGG 59 24644355 24644375 GATATACTGTTCGCCCAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085195 3 1 2 191 3R 23484414 23484433 GCTACGAGGACTTCATTGAG 58 23483669 23484200 CGAGGAATGGAGAGTAGGG 58 NA Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 1 1 1 60 3R 23410081 23410357 CTCGCAAGGAAGAATGGTG 58 23410381 23410399 CTTGATCAGGTCCAACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14260 FBgn0039504 FBtr0085157 1 1 1 152 3R 23091559 23091577 CTGCTACATCGACAAGCTG 58 23091741 23091759 GAGTTGTCCATGAGCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6051 FBgn0039492 FBtr0113297 2 1 1 183 3R 22976131 22976149 GGACACGTTTAAACGCTGG 59 22954291 22954371 CACTTTGTCCTGATTCTGCC 59 NA Drosophila melanogaster 61 CG5491 FBgn0039459 FBtr0085061 2 1 1 62 3R 22690003 22690021 GATCCTCTAAGTCCACGGC 59 22690047 22690065 TGTTGTGCTTCTCCATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995 1 1 6 259 3R 22083752 22085532 CAAGTGTAGAACTACACTCGA 57 22083513 22083531 ACTCCAGAGATGTTCTCGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139,FBtr0290138,FBtr0290141,FBtr0290140,FBtr0290137 1 5 5 184 3R 21733746 21733767 GCTTCTATTTCGGCTTTATCGA 59 21733912 21735764 GATTCCAGACACGAAGCTG 58 NA Drosophila melanogaster 61 CG5053 FBgn0039352 FBtr0084898 2 1 1 89 3R 21489962 21490042 GACCAATAGGCAAACTGTGG 59 21490094 21490112 GTGTCAGTGTTGTGCAGAG 59 NA Drosophila melanogaster 61 CG11913 FBgn0039331 FBtr0273265 1 1 1 101 3R 21184208 21184279 CATCAAACAAAGAAGATTGCCC 58 21184341 21184359 TGTCATAGGGCTCGTATGG 58 NA Drosophila melanogaster 61 CG11889 FBgn0039308 FBtr0100614 2 1 1 61 3R 21098601 21098619 TGTTCCGAGCCTATTCGTC 59 21098644 21098719 CGAAGGCAGCATAGAAGGA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 2 3 3 84 3R 20863985 20864006 GTTCAACTTCAAGGAGAATTGC 58 20862429 20863943 TCTATATGAATCATGGTTGGCG 58 NA Drosophila melanogaster 61 CG42539 FBgn0260656 FBtr0301215 1 1 1 90 3R 20735204 20735223 CCGAGATCTCATACTATGCC 57 20735275 20736512 AATACTCCAGTTTCGTCGTG 58 NA Drosophila melanogaster 61 CycB3 FBgn0015625 FBtr0084728 1 1 1 60 3R 20695188 20695206 GAAACGTTCGAGCTGAACC 59 20695146 20695168 GATACAGATCGACGATCTTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 3 2 2 172 3R 20445819 20445903 TCCATCAACAGTGGAAATGC 58 20446181 20446199 CCGAGACTATGGTCGATGG 59 NA Drosophila melanogaster 61 CG13622 FBgn0039202 FBtr0289971 2 1 1 60 3R 20348697 20348715 GTCAGGGTCAGGTTTACAG 57 20348655 20348673 TTGGGATACTGAACTGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18669 FBgn0040599 FBtr0113329 2 1 1 86 3R 20193155 20193173 AAGATGGATTCCTGGGTCG 59 20192822 20193108 ATGACGTGATTTGACTCATCAG 58 NA Drosophila melanogaster 61 CG5728 FBgn0039182 FBtr0084632 3 1 1 116 3R 20154806 20154880 CCAAATCAAGAGCACATCCC 59 20154709 20154729 TCGTTTGGGATAGGAAGTGAC 59 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084539 2 1 2 170 3R 19880168 19880331 GTAATATTGCCAGGCTCCTC 58 19880464 19880482 AATTCCTGACTAACCACGC 57 NA InUTR Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084596,FBtr0084595 3 2 2 176 3R 19862536 19862666 TGGAAGAACAGGAGCTCAC 59 19862378 19862396 TCTGTATCACGGCCTTCAC 59 NA Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445,FBtr0084472 1 2 2 80 3R 19542148 19542230 TGCTACAGGAATCCAGTACC 58 19542087 19542105 GATAATCGGACTGGCAGCT 59 NA Drosophila melanogaster 61 CG10184 FBgn0039094 FBtr0084481 2 1 1 120 3R 19429612 19430543 ACTGGCAATTATGGTTCACTG 59 19429447 19429465 AGTGGCTAATTGGACTCCG 59 NA Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0112485 1 1 2 100 3R 19333179 19334826 AGGATAGCCAATCAAGCCA 58 19332916 19332934 CTTCTTTAAGCACGCCGAG 59 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 2 3 3 121 3R 19008674 19008692 GCAGACACGTTTCAGTTCG 59 19008777 19009178 TGGTGAAGATGTCCTGCAG 59 NA Drosophila melanogaster 61 CG13829 FBgn0039059 FBtr0084400 2 1 1 60 3R 18986939 18986960 GAACAATGCTGAACTTGTTTCC 59 18986848 18986866 TCGTTCGACGAGATATTCG 57 NA DesignNoJunction Drosophila melanogaster 61 Rassf FBgn0039055 FBtr0084407 1 1 1 80 3R 18941120 18941139 AGTTGTGCTGAGAAGACCTC 59 18940998 18941077 AGCTTGGTACGAGAACGAC 59 NA Drosophila melanogaster 61 CG6738 FBgn0039053 FBtr0084353 1 1 1 85 3R 18925918 18925990 AGCGTATACGATGGATTCTC 57 18926038 18926056 CTTAACTCCGGCTGTATCG 57 NA Drosophila melanogaster 61 CG6015 FBgn0038927 FBtr0084183 1 1 1 80 3R 17858474 17858555 AGAAGATCATTTGTTGGGACAC 59 17858415 17858433 TGATGGTGCTCACAGATCC 59 NA Drosophila melanogaster 61 CG31353 FBgn0051353 FBtr0084191 3 1 1 70 3R 17804573 17804592 CTAGGCTAGAGAACTGTGGC 59 17804522 17804542 GTACCTGCAGCTAAAGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lbe FBgn0011278 FBtr0084091 1 1 1 80 3R 17270856 17270874 GTCAAACGGAGACACTCCT 59 17268110 17270814 AAGTGGGATTTATCTTGCGAC 58 NA Drosophila melanogaster 61 CG5745 FBgn0038855 FBtr0084008 3 1 1 81 3R 16929825 16929843 AACTACATCTTTGCCCAGC 58 16929888 16930316 GTAAGTTCACGTCAATGCG 57 NA Drosophila melanogaster 61 CG31223 FBgn0051223 FBtr0083965 2 1 1 90 3R 16656927 16657004 AAAGTGTCACTTCTGTCGC 58 16657058 16657076 CTTGGACTTGTAGCATCCC 57 NA InUTR Drosophila melanogaster 61 Takl1 FBgn0046689 FBtr0083996 2 1 1 119 3R 16597972 16597990 TGATGGAGTACCTGGAGGA 59 16597818 16597889 AGTATGCTAAGGCCTTGGC 59 NA Drosophila melanogaster 61 CG4335 FBgn0038795 FBtr0083894 2 1 1 88 3R 16233408 16233429 CGATGTCTTAGATCTACCAGCT 59 16233282 16233359 TGTGAGCATCACTCCACTG 59 NA Drosophila melanogaster 61 CG34118 FBgn0083954 FBtr0110821 1 1 1 82 3R 16309751 16309771 CAACATAGCAGAACTCGACTG 59 16307343 16309707 CACAGTTCACATGGCTAGC 58 NA InUTR Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0302327 3 1 3 144 3R 15689903 15690054 AAAGCAAGTCGAATCAGCG 59 15689777 15689797 GGATACGGATTGATGAAGCTC 58 NA InUTR Drosophila melanogaster 61 CG6026 FBgn0038676 FBtr0273301 2 1 1 164 3R 14867812 14867895 AACCATTGAAATTCCCTGCC 59 14868017 14868040 GGTTGTACTCGTTATAGAAGTTGG 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 1 4 4 86 3R 14810830 14834236 CACAGTTCCTGAAAGCGAC 59 14834286 14834304 GTAAAGAGCTCCTGCTGGA 59 NA Drosophila melanogaster 61 CG14297 FBgn0038655 FBtr0083696 2 1 1 83 3R 14724287 14724366 TTTGTCGTCAGTTCACCGT 59 14724412 14724431 GGAGCAGTTCTTTGAACACG 59 NA Drosophila melanogaster 61 CG7715 FBgn0038646 FBtr0083685 1 1 1 100 3R 14554043 14554137 GATGAAAGTATTCGCATTGTGC 59 14553964 14553982 AGCGGATACTGATCTCACC 58 NA InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0290209 2 1 5 80 3R 14411687 14412011 TTCATTCAATAGGTGGCACAC 59 14412052 14412071 CTTCGGATCTCTTTCTTGGG 58 NA InUTR Drosophila melanogaster 61 CG18599 FBgn0038592 FBtr0083571 2 1 1 163 3R 14096185 14096322 AAACTCAAGTCGGATTCTCAC 58 14096446 14096465 TCCGTTAACTTTAGGGTGTG 57 NA Drosophila melanogaster 61 CG14317 FBgn0038566 FBtr0083541 1 1 1 60 3R 13908108 13908129 GAGCAACAAATATGTTCAGGTC 58 13908149 13908168 ACCATCCTCCTGATATTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100378 2 1 7 88 3R 13793473 13793491 GAGAATCAGATGGCTCTGG 57 13793543 13793561 CTGTCACTCACCTCTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sll FBgn0038524 FBtr0083462 1 1 1 80 3R 13433389 13433660 CATTTGCTACAGAGCATCCT 58 13433701 13433721 AGATAAACAATTGTCCGACCG 58 NA Drosophila melanogaster 61 CG17475 FBgn0038481 FBtr0083417 3 1 1 60 3R 12955308 12955332 CAACGTGTACTATTATCTGGAATGG 59 12955272 12955290 ACAGTTGCTACATGGTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17475 FBgn0038481 FBtr0083417 2 1 1 60 3R 12955813 12955833 CTGCGTATATGGCTATAACCC 58 12955773 12955791 TTCGTACTCCACAGTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 1 2 2 85 3R 12819315 12819333 ACTTTAATCCTGGACCGCA 59 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 sxe2 FBgn0038398 FBtr0083225 3 1 1 117 3R 11911738 11911757 GGTACGATCTTTATACGCCC 58 11911836 11911921 TGAATGGAGACCCTAACTGG 58 NA Drosophila melanogaster 61 CG5013 FBgn0038396 FBtr0083223 2 1 1 190 3R 11875629 11875698 AATACCTGAGCTGCTTCAG 57 11875851 11875870 TGCAGTTGTCAGTAAGTACC 57 NA Drosophila melanogaster 61 blp FBgn0038387 FBtr0083203 3 1 1 164 3R 11759645 11759730 AATTTACCTGAAGGACGCC 57 11759856 11759876 CATGACGGTTTCTTGTATTCC 57 NA InUTR Drosophila melanogaster 61 CG3303 FBgn0038381 FBtr0083200 3 1 1 81 3R 11735291 11735373 GAAATGGGAAAGCACAACCA 59 11735417 11735435 CAAAGAAGCCGTTGACTGG 59 NA Drosophila melanogaster 61 CG18516 FBgn0038350 FBtr0083150 1 1 1 80 3R 11375260 11375279 GCAACGGTGACTATTTACCA 58 11375139 11375218 TGTATTCATACCCTGACCCA 57 NA Drosophila melanogaster 61 h-cup FBgn0038334 FBtr0083107 3 1 1 60 3R 11207942 11207964 TACAGCATAGATAGCTTCCTCTC 59 11207904 11207922 ACTCCGAATCATCCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6136 FBgn0038332 FBtr0083108 3 1 1 60 3R 11197510 11197529 AGAGAAATGTCCAACCACGA 59 11197469 11197487 AAGCCGATCGTATGGAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14868 FBgn0038330 FBtr0083109 2 1 1 82 3R 11194556 11194635 AGTACAAGACAATGTTGGATGC 59 11194495 11194516 TAGAATGGTGTCCTCATTTGTG 58 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 1 1 1 183 3R 11158531 11158735 GGTTTGAACATGAAGCCTGAG 59 11158368 11158386 TGCTGAAGTTCAGGTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083058 2 1 6 104 3R 11068885 11070086 CAGTCTACTTTCGGTTGAATGTC 59 11070150 11070168 GATGATCTCGACCTTGCCA 59 NA InUTR Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083135,FBtr0083134 2 2 2 60 3R 11054139 11054158 ATCCTATCCATCTTCGCCTC 58 11054098 11054116 CCGAGTTATCTATGCCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb7 FBgn0051155 FBtr0083137 3 1 1 90 3R 11048357 11048432 CGCATCATTCTATTCCCGC 59 11048285 11048303 CCGGAGATAACCACATCCT 58 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 2 3 3 80 3R 11013236 11013254 CGGTTGAACTGAAGTTGGC 59 11013296 11013378 CCTCATCCAACAATCTCATGG 58 NA Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 2 2 2 69 3R 10485973 10485991 TTGGAGCCAAATTACGAGC 58 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cyp313a1 FBgn0038236 FBtr0082954 2 1 1 98 3R 10347635 10347728 GCTTCGAATCGCTCATATCTC 59 10347785 10347806 CTCGTAACTTATCATAACCGCA 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 3 5 5 81 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796280 9796298 CTCACCCATTTCTTCCCGA 59 NA Drosophila melanogaster 61 CG9926 FBgn0038190 FBtr0082877 1 1 1 60 3R 9776311 9776330 TGTGGAGCTAAATTCACTGG 57 9776270 9776289 CTCTGAATCCTTCTCATGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9312 FBgn0038179 FBtr0082825 2 1 1 80 3R 9591685 9591703 ATAAGCACCCAGAGTCTGC 59 9591830 9591849 TAAATCGTCACTGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Adgf-C FBgn0038173 FBtr0082821 3 1 1 92 3R 9534286 9534360 AGAGACCAATTGGTTTGGTG 58 9534415 9534433 GCCAGAGCATAACCATGAC 58 NA Drosophila melanogaster 61 CG9796 FBgn0038149 FBtr0082760 2 1 1 80 3R 9224682 9224807 TCTGTTCAATGAGCAATTCGAC 59 9224623 9224643 GATACGTATTGGCAGATGGTG 59 NA Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 1 2 2 92 3R 9193803 9193821 AGGAATCGTTGGAACTCCG 59 9193875 9193985 GCATTATTGTAGTTGCGTCGT 59 NA Drosophila melanogaster 61 CG11668 FBgn0038113 FBtr0082705 3 1 1 170 3R 8865320 8865403 CAAACCAAGTTCGCTGGAC 59 8865536 8865555 CTGGCATGTGTCCATATTGC 59 NA Drosophila melanogaster 61 yellow-f FBgn0041710 FBtr0082723 2 1 1 80 3R 8818238 8818259 CTGTCTATAGAACCTCAGTGGA 58 8818113 8818198 GGCGATTATTGGGAAACTCC 59 NA Drosophila melanogaster 61 Arp87C FBgn0011745 FBtr0082652 1 1 1 84 3R 8519471 8519558 TCTCAAGATCAGGATCGCTG 59 8519605 8519623 GAAAGTATCGAGCGAGGCT 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 3 2 3 160 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213644 8213715 GAAGAGCGAGAAGACTTCCT 59 NA Drosophila melanogaster 61 Ugt86Dh FBgn0040252 FBtr0082340 3 1 1 93 3R 7001503 7001521 CATAGAGGGTGTCCATCAC 57 7001926 7001946 CCATTTGGTTAAATCGGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Sodh-2 FBgn0022359 FBtr0082324 2 1 1 92 3R 6703536 6703613 ACTGCAATGATTATTCCGCC 59 6703668 6703686 TCTCCGTGATGTCGTAGTG 58 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 1 1 1 101 3R 6586245 6586326 GATTGACGATATCAGTCTGCT 57 6586164 6586182 TGCATTTCCATCATGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090033,FBtr0090032 2 4 4 82 3R 6117703 6117722 GTCACAAGCACAAGATCTGC 59 6117765 6117846 ATCAGCAATCTTAGCATTGCC 59 NA Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 1 1 1 102 3R 5878494 5878512 ATGTAGAGCGCCTTCTGTG 59 5878353 5878428 CATGTATCCTCACTGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Art4 FBgn0037770 FBtr0082150 2 1 1 89 3R 5809712 5809788 TCACGCAATTCTTCAAGCA 58 5809641 5809660 CGGATGCATAAGTCCATGAG 58 NA Drosophila melanogaster 61 Ras85D FBgn0003205 FBtr0082122 3 1 1 89 3R 5337711 5337887 CAAGTGGTTATCGATGGAGAG 58 5337642 5337661 CATATACTGATCCCGCATGG 58 NA Drosophila melanogaster 61 Task7 FBgn0037690 FBtr0082045 2 1 1 81 3R 5237543 5237624 GGGAATTCCTACAGACCGT 58 5237480 5237498 ACGATTTCCATCACACGGA 59 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 1 2 2 121 3R 5192793 5192813 CAGTGGCTATCCTAAGATTGG 58 5192895 5192978 CACCACAACTTTCTTTCCCT 58 NA Drosophila melanogaster 61 CG9731 FBgn0037640 FBtr0081929 2 1 1 60 3R 4687774 4687795 GCTTCAAGAAGGTGAGATACAG 58 4687735 4687753 TTTGAGGGCATTTGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9839 FBgn0037633 FBtr0081934 1 1 1 81 3R 4630962 4630980 GAGAGTGATTCCGACGAGG 59 4630834 4630919 AGTCATCCATATCGTCCTGAC 59 NA Drosophila melanogaster 61 CG13318 FBgn0037627 FBtr0081942 3 1 1 92 3R 4597896 4597978 GGAGGATATCCCACTGTTCC 59 4597823 4597841 ACCACACTGATAGCTTCCC 59 NA Drosophila melanogaster 61 CG18744 FBgn0042101 FBtr0114516 3 1 1 111 3R 3624048 3624365 AATCAAAGCAATATGCCTGGAG 59 3623958 3623977 CAAACTCTGAACCACCACTG 59 NA Drosophila melanogaster 61 Dpck FBgn0037469 FBtr0081638 2 1 1 80 3R 2908045 2908063 CCATCAGCAAAGTGTTCGA 58 2908107 2908210 GACCTGGTTCCACAATCTC 57 NA Drosophila melanogaster 61 lab FBgn0002522 FBtr0081696 2 1 1 90 3R 2502911 2502930 CAAAGTCGCCAAATCATTCC 58 2488696 2502858 GGTAGTTTCGGTGCTTGAG 58 NA Drosophila melanogaster 61 Hr83 FBgn0037436 FBtr0081713 3 1 1 61 3R 2175552 2175572 ACTCAACTTTATGGAGTCCCT 58 2176028 2176046 CATACTCCGCATTGATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Osi18 FBgn0037428 FBtr0078611 1 1 1 77 3R 2156477 2156495 TCAGGGAGGATTAGTTCCC 57 2156828 2156846 AGAAGGAAGGGCAGAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 2 2 2 135 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671325 1671344 GAAGAAGTACGGACTCTCGG 59 NA Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 3 1 1 98 3R 1560061 1560079 CTTCAGACGCATGTACCTG 58 1560141 1560228 TGTTCCGATAGCTTCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 1 2 2 94 3R 1476894 1476980 AGTTGATTCGTCTGTGCCA 59 1477038 1477056 GAATTGCGGGAATAGGCTG 59 NA Drosophila melanogaster 61 CG12170 FBgn0037356 FBtr0078709 1 1 1 60 3R 1463817 1463837 CCATTCTAGCTGAGATTCTGG 58 1463859 1463877 GGCGACGTTATGTGATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14671 FBgn0037340 FBtr0078754 1 1 1 93 3R 1390054 1390137 ATTGGTTCTCGGTACTGCC 59 1389979 1389997 TGCAGATTAGTGCTCTCGG 59 NA Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 1 2 2 80 3R 1375368 1375386 CGGAAACATAATGGCCCAC 59 1374902 1375327 TTGTAAACACCAATGACTCTGG 59 NA Drosophila melanogaster 61 Nmdar1 FBgn0010399 FBtr0078763 1 1 1 80 3R 1341986 1342004 CCTCGACGTACAACATTGG 58 1341853 1341944 AGTTGAGGTGCTTTATTGTGG 58 NA Drosophila melanogaster 61 mRpL44 FBgn0037330 FBtr0078768 2 1 1 65 3R 1296248 1296266 CTCGTGTCAAGCTCTTGGA 59 1296149 1296167 AAACCCATCGCTTGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 1 2 2 80 3R 776120 776203 TTAACATCCATACAGTCACTGC 58 776061 776079 TTCTTTATACAGCTGGGCG 57 NA Drosophila melanogaster 61 Nep2 FBgn0027570 FBtr0078891 3 1 1 80 3R 549285 549306 TAGCATGGACTACATCATCGAC 59 549092 549247 GACTGGTCCAGATCTATAAGCC 59 NA Drosophila melanogaster 61 TwdlF FBgn0037224 FBtr0078975 2 1 1 100 3R 72798 72875 GTTCTAATGTGCCTGGTGG 58 72939 72957 GTCAGAGGACGAAGATTGC 58 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 1 2 2 80 3R 24424 24442 ATGCATATTCGCTGCTTCC 58 24483 24561 CAATAGCTCGACAGCATATAGG 58 NA Drosophila melanogaster 61 CG12460 FBgn0040045 FBtr0302384 1 1 1 81 3L 24527465 24527762 ATTCAAATGCGGCACTTCC 59 24527807 24527825 ATGTTGGCGTTCTGATTCG 58 NA Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0078518 3 1 2 142 3L 22680799 22680819 ACTAATCTAAACACCACGCTG 58 22680923 22681048 ATGAAGTAGGAGCCCTTGG 58 NA Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 2 2 2 111 3L 21959323 21959341 AATTGTCCGCTTGGATGAG 58 21959413 21960242 GTCGAAGAAGATGTTAGTTTCC 57 NA Drosophila melanogaster 61 CG32448 FBgn0052448 FBtr0290247 1 1 1 108 3L 21821252 21821270 GATGAGCGAAGGAAAGCAG 59 21821096 21821180 AATCTTGTTCGGCTTGGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33290 FBgn0053290 FBtr0078370 1 1 1 60 3L 21535860 21535878 CAGATAACAGCCGACTTCC 58 21535900 21535920 TTCAATCTATTCACCCAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pros54 FBgn0015283 FBtr0078368 3 1 1 82 3L 21530409 21530427 CATCAATCTGGTCTGCCTG 58 21530473 21530551 CTTCAACGGTGTTGGACAG 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 Pc FBgn0003042 FBtr0078405 3 1 1 126 3L 21310930 21310948 AGTCGATCTAGTGTACGCG 59 21310508 21310526 GATGTTTACCTCCGGTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304,FBtr0273212,FBtr0273213 3 3 4 85 3L 21205481 21205895 GACACTTGGAAATGTCTTCACC 59 21205941 21205959 GGTCTCCTGAATGGTGGAG 59 NA Drosophila melanogaster 61 CG33286 FBgn0053286 FBtr0113459 2 1 1 80 3L 20964098 20964173 AACATCGGCAACTTTACGG 58 20964036 20964056 AGAATCCTTATTTCGCACCTC 58 NA Drosophila melanogaster 61 CG33287 FBgn0053287 FBtr0290073 1 1 1 80 3L 20962318 20962341 CAATACAAGAAGTTCCTGAGTACC 59 20962196 20962282 ACACTCCCTAAGATTAACCTCC 59 NA Drosophila melanogaster 61 CG10588 FBgn0037037 FBtr0078284 3 1 1 60 3L 20952691 20952712 AAACATCGAGCAGATTATGTGG 59 20952733 20952751 GTTCAGCCATTCGAGACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32432 FBgn0052432 FBtr0078268 1 1 1 80 3L 20840718 20840736 CTCGGAGAGCTATGTGTCC 59 20840603 20840677 TCCAGTGGTCTTAATACTGTGG 59 NA Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 1 2 2 82 3L 20835436 20835507 AACATGTTAGAGCCGTGCT 59 20835553 20835571 CAACTACAGTGGAGCTCCA 59 NA Drosophila melanogaster 61 mTerf3 FBgn0037008 FBtr0078215 2 1 1 120 3L 20512988 20513065 TCTTGATGATTCCTCCGGA 57 20512886 20512904 AGTCTAAATTCGCGTGAGG 57 NA Drosophila melanogaster 61 RhoBTB FBgn0036980 FBtr0078185 2 1 1 85 3L 20371678 20371696 CGCTATCTCAGCTCCTCTC 59 20371745 20371826 TGATCGCTCGAGTACATCC 59 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074853 3 1 3 118 3L 20212750 20213452 GATGCAAGCAATCAATATGAGG 58 20212653 20212671 CGATGTATCCATAGCCCGA 58 NA InUTR Drosophila melanogaster 61 CG7328 FBgn0036942 FBtr0074864 3 1 1 60 3L 20132710 20132730 AAAGCCTGTCTTCATTTGTCC 59 20132670 20132690 TCCATTAGCATCCATAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32221 FBgn0052221 FBtr0301008 1 1 1 80 3L 19828328 19828346 CCATTGGGATACACCTTCC 57 19828387 19828471 ACTGACGTACTTCTTGTAACTC 57 NA Drosophila melanogaster 61 CG9452 FBgn0036877 FBtr0074978 2 1 1 85 3L 19495720 19496437 GGACATGTGACTAACTCAGGA 59 19495655 19495674 TAAGGACCCATAAACTCGCC 59 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044,FBtr0290043 1 3 3 114 3L 19486753 19487450 CTACAGTCCCGATTCGGTC 59 19486657 19486675 ATTCCACTCCATGTCGGTG 59 NA Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0075063 1 1 2 67 3L 18862716 18862734 CTACTGTCCCTACTGCACG 59 18862825 18862843 CTATTATGGTGGCGTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32201 FBgn0052201 FBtr0300051 1 1 1 80 3L 18603068 18603086 TTTCACTGCTAAGACGCAC 58 18603128 18603345 TCTGATTTCCTTCTCCAATGG 57 NA Drosophila melanogaster 61 CG13699 FBgn0036781 FBtr0075134 2 1 1 86 3L 18150171 18151128 ATAACCAATTTCCTCGCTGGA 59 18150105 18150123 CTCTCCACCACTCAAACCA 59 NA Drosophila melanogaster 61 cln3 FBgn0036756 FBtr0075167 2 1 1 97 3L 17803101 17803121 GCTCTTCTATATCAAGCACCT 57 17802967 17803043 AAACCAGTTCGAACAATCCT 57 NA Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 2 2 2 185 3L 17670666 17676048 GAGTTTCAGAGTGTGCCAG 58 17676195 17676215 TTTGTTGACCTCATAGCACTG 58 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 2 2 4 163 3L 17558813 17567900 GCGATATTACACCGAAATTCC 57 17558670 17558689 TTTGCTCCGTCTTTATGTGG 58 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222 3 1 3 175 3L 17467927 17468005 CGGCAAAGTTTAAAGATCCG 57 17468142 17468161 AACATACCAAGCAGTTAGGC 58 NA InUTR Drosophila melanogaster 61 CG13727 FBgn0036711 FBtr0075243 2 1 1 85 3L 17334034 17334053 GGTGGGAATATACACGATCG 58 17333839 17333857 GGTTGACTGTCATAGGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 3 3 12 161 3L 16895016 16895038 GAGGAAATCGAACTAGAAAGACC 59 16895158 16895237 TTCTTTGTCCAACTGCTCCT 59 NA Drosophila melanogaster 61 PGRP-SB2 FBgn0043577 FBtr0075320 3 1 1 112 3L 16719908 16719927 GGATGGTCGAATCTACGAGG 59 16720000 16720080 GTAATCCAGTCTGGAAGTTGC 59 NA Drosophila melanogaster 61 Syx8 FBgn0036643 FBtr0075365 2 1 1 83 3L 16579477 16579551 GGACCAGAACAATATCCTTGAC 58 16579415 16579433 CCAATGCTCTGTGTTTCCC 59 NA Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653,FBtr0300654 1 2 2 80 3L 16513217 16513235 GCAAACATTATCGACGCCT 59 16511683 16513173 CTCGCATCCTGTATCTGGT 59 NA Drosophila melanogaster 61 CG5389 FBgn0036568 FBtr0075446 3 1 1 84 3L 16091023 16091104 AAATGGCTACAGCATGTGC 59 16091149 16091170 ACAGGATTACCAAGATAGTTGC 58 NA Drosophila melanogaster 61 CG42570 FBgn0260776 FBtr0301333 3 1 1 81 3L 15711733 15711806 ACCTTTACGATTCTACTGTTCG 58 15711848 15711866 AGTCGTTCAATCGCATCTC 58 NA Drosophila melanogaster 61 Eig71Ea FBgn0004588 FBtr0075587 2 1 1 60 3L 15642349 15642432 AAGCTAAATTGCTTGGGTTGG 59 15642309 15642327 CAGCCCTCATAGCAATGTC 58 NA DesignRelaxed Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299850 3 1 2 97 3L 15640344 15640363 TTAAATCAGGCGGAACAAGG 58 15607089 15607107 ATCTCGATCGTGGGATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 1 4 4 141 3L 15505711 15505729 TCTGTACCACGATGAGGAG 58 15505834 15505911 ATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 CG12310 FBgn0036467 FBtr0075665 2 1 1 60 3L 15043739 15043758 CGATGAGGATTCGACTAGCA 59 15043698 15043716 AGATTCCTCCGCATCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075686 3 1 2 93 3L 14698842 14698860 TCCAATGTTATGGGCTACG 57 14698916 14699046 TTGGATATTGATCCAGGTCG 57 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 2 3 3 81 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621437 14621458 ATCGTTGTTTATCATCTGCAGG 59 NA Drosophila melanogaster 61 CG13738 FBgn0036390 FBtr0075790 1 1 1 60 3L 13966336 13966354 CAGGTGGTCTACTGTTCCT 58 13966294 13966312 TTCTCACGGTGTTCGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075816 3 1 2 80 3L 13631654 13657527 CAAGTTACTATGAACCGTGCT 58 13577349 13577367 ACCAAATTTGACGAAAGCG 57 NA Drosophila melanogaster 61 CG10116 FBgn0036367 FBtr0075824 3 1 1 97 3L 13450043 13450117 CCAACAGTCGTAACTATTCCC 58 13449966 13449984 ATATTGCTGTCCTGCTGCT 59 NA Drosophila melanogaster 61 SNCF FBgn0036349 FBtr0075840 1 1 1 60 3L 13371939 13371957 TTTCCTATCTCCGGCTGTC 58 13371981 13371999 TTCTTGGCGATTAGTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075901 1 1 2 83 3L 12959915 12959933 TATGCCAGTGGTCTAGTGG 58 12957721 12959870 TTTGCCACTAGCTAAAGTGAC 58 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 1 3 3 132 3L 12820166 12820184 ATCCTGTTCGTCTATGCCG 59 12819718 12820072 CTTTGGAAACCAAGTAGGTGG 59 NA Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 1 1 1 91 3L 12768757 12768777 GATTAGTCCTACACAAAGCCA 57 12768632 12768704 CTCTTCCTTCGTTCTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 3 2 3 87 3L 12493366 12493387 CTACACTGATTCCAAGCTACTG 58 12493241 12493324 GCCAATATCGATCAAGTATCTTAGG 59 NA Drosophila melanogaster 61 CG10616 FBgn0036286 FBtr0075956 2 1 1 82 3L 12465224 12465242 ATCAACTCACAGGCATTGG 58 12465287 12465656 ACAAAGATTCCGATGACGTC 58 NA Drosophila melanogaster 61 RhoGAP68F FBgn0036257 FBtr0075997 2 1 1 85 3L 12134439 12134457 TTGATGATACCGAGCTGCT 58 12134569 12134644 AAGTTCTGGATCTTCGGCC 59 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 2 5 5 101 3L 12021870 12021888 GGAAACTGATCGACACCTG 58 12020253 12021806 CATCAACATCTTTCAGCGAG 57 NA Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075,FBtr0076076 2 2 2 80 3L 11821206 11821297 CATGACGCTGTATATTTCCGAG 59 11821147 11821166 GCGGATGACATAAGTGATGG 58 NA Drosophila melanogaster 61 PCID2 FBgn0036184 FBtr0076102 3 1 1 60 3L 11619874 11619893 CTGAAGGACGAGAATTGGTG 58 11619916 11619934 AGTACCTTAGATCCAGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6083 FBgn0036183 FBtr0076137 3 1 1 90 3L 11618777 11618797 TGACTGCGCTCATATCTATGG 59 11618643 11618726 GAGTTCATCTCGTGTGACCA 59 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 2 4 4 99 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600360 11600378 CATTGTAGTGTGATCCGCG 59 NA Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 1 2 2 81 3L 11513444 11513462 CAGTCAATTCACAGCGGAG 58 11513300 11513400 GAGCACAACATATCTGGCTC 58 NA Nonspecific Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076169,FBtr0076168 2 2 2 60 3L 11247414 11247433 CAGTTCATGAAGAGTTTGGC 57 11247454 11247474 TCTTGGTGATCGTATACTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Alg10 FBgn0052076 FBtr0076217 3 1 1 82 3L 11158264 11158284 ATGTAATCGACGAGGAGTTCC 59 11158326 11158403 TGTTATCTTGGGATCCCACAC 59 NA Drosophila melanogaster 61 Elo68alpha FBgn0052072 FBtr0076232 1 1 1 80 3L 11095628 11095731 ACGAAATGCGTCTTACAAAGG 59 11095568 11095586 GGATGAAGAAAGCCGTGTC 58 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 2 3 3 80 3L 11064071 11064156 CAGGTGCTGAGAAAGAATTCG 59 11064195 11064216 GCGTTCGGTTAGAGAAATTCTC 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420,FBtr0113418 1 2 5 99 3L 10580773 10580946 AATCTACGCTTCCAGGCAG 59 10582468 10582486 ACAGCGGAGTCTTTAGCAG 59 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 1 3 3 80 3L 9721525 9721616 GAAGAGAAGATTTACGCTTCAC 57 9721657 9721675 ACATAGGTGAATCCGTCCT 57 NA Drosophila melanogaster 61 CG18178 FBgn0036035 FBtr0076412 1 1 1 60 3L 9711854 9711872 ATACAATCAAACCGCAGCC 58 9711812 9711831 TTGGTGTGGATCTTCTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14177 FBgn0036013 FBtr0076378 3 1 1 60 3L 9591217 9591235 GTGCTTACGATTTGGCCTG 59 9591258 9591277 CTCGGATATAGCCATTCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4080 FBgn0035983 FBtr0076494 1 1 1 90 3L 9383888 9391614 AATGTCAGATTCGGTTCGG 58 9383816 9383834 GATTCTGCGGATCACTCTC 57 NA Drosophila melanogaster 61 CG42509 FBgn0260235 FBtr0300644 1 1 1 80 3L 9259597 9259618 CAAATACTCATCCAACATGTGC 58 9259659 9260111 GTCCATGACCAAACCACTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13315 FBgn0040827 FBtr0076530 2 1 1 71 3L 9090234 9090252 AACAAGCTGCAGAACTTCG 59 9090287 9090305 GCTGCGATCATAGTTCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076564 3 1 4 80 3L 8937611 8937928 GTTAATTTCATTTGCGGTGGC 59 8937551 8937570 CTGTTGTTGATGCTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 CG13309 FBgn0035933 FBtr0076582 1 1 1 91 3L 8804027 8804117 TGCAGGCAATATGTGAACTG 59 8804167 8804189 GAGGTACTATCGAAGTAGGTGAG 59 NA Drosophila melanogaster 61 CG13306 FBgn0040828 FBtr0076592 1 1 1 168 3L 8742806 8742824 AAGAACTGCCGTAAATGCG 59 8742599 8742617 TCAGGTAAACGACCGTCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Jon66Ci FBgn0035886 FBtr0076608 1 1 1 70 3L 8384853 8384871 ATCATCTCCAACGAGTGGG 59 8384905 8384923 CCGAAGTAGACAGTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7083 FBgn0035877 FBtr0076604 1 1 1 60 3L 8334149 8334168 TATATTCGCAACGCGAACTG 59 8334254 8334272 ACGATCTCCAGATCTAGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7185 FBgn0035872 FBtr0076710 3 1 1 65 3L 8308209 8308227 TGGTCTTGGATCTGTACGC 59 8307767 8308180 CAAATTCGTCCTGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302841,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112693,FBtr0302840,FBtr0112702,FBtr0302843,FBtr0112698 2 11 15 60 3L 7649296 7649488 GAATATTTGGCTAGACAAGGCG 59 7649257 7649278 CGTCCAGAGATTCCTTTATTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8560 FBgn0035781 FBtr0076868 1 1 1 80 3L 7396978 7396998 GAAACTATTTGCTGTGGTGCT 59 7396701 7396938 ATGTCGTAGATCTTGTAGCCA 58 NA Drosophila melanogaster 61 CG8563 FBgn0035777 FBtr0076852 3 1 1 82 3L 7387361 7387848 ACACAACGGATCGTTTCTG 58 7387891 7387912 AAAGTTACGATTGATGTCCACG 59 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 2 2 2 80 3L 6708856 6708874 GTTCTCGCAGGAGATTGGA 59 6708455 6708813 GTGAACCAGTATACCGTGGA 59 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 2 4 4 80 3L 6685395 6685482 CGTAATAACCGGTCTTACAGC 59 6685335 6685356 CGGTATTCCGAGAAGTTTAGAC 58 NA Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 1 2 2 61 3L 5788242 5788665 TTGTCCAAACAGCATTGCC 59 5788199 5788217 AGATTCTCGTACGTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10674 FBgn0035592 FBtr0077181 3 1 1 141 3L 5129100 5129186 ATGATGAAGCTCAAGTGGTG 58 5128978 5128996 GGAGGTAGGACATCACCAC 59 NA Drosophila melanogaster 61 CG32235 FBgn0047330 FBtr0073355 2 1 1 171 3L 4860199 4860283 GCAATTAATTGTGGACAACGC 59 4860048 4860067 ATACGGGAACCTGAATCCTG 59 NA InUTR Drosophila melanogaster 61 CG11349 FBgn0035550 FBtr0073305 2 1 1 60 3L 4473436 4473456 ATCACTATGACAAGAAGCCAG 57 4473477 4473496 GGCTTGCTATGCTTGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11345 FBgn0035546 FBtr0073334 2 1 1 61 3L 4458027 4458110 GAAAGTCCTTATGCTGGCTG 59 4457985 4458003 ACAAATGCGAGACATCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr64Ac FBgn0035512 FBtr0073252 3 1 1 210 3L 4212794 4212874 CATGATTGCCCAGACTCTG 58 4212602 4212620 GACCTTGGGAGCATAGGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cpr64Aa FBgn0035510 FBtr0073254 3 1 1 86 3L 4208554 4208899 ATGTTCATGATGGCTCCAC 57 4208486 4208504 CAATCAGTGAATAGGCGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1299 FBgn0035501 FBtr0073215 2 1 1 83 3L 4151548 4151629 CAGGATCTGCAATTTGTACG 57 4151673 4151693 CCTTGCTATGTTAATGTCCAC 57 NA Drosophila melanogaster 61 Akh FBgn0004552 FBtr0073213 3 1 1 122 3L 4141645 4141733 CCAGTGTCAATTGACCTTCTC 59 4141817 4141835 ATCTCGAGCAGCATTTCGT 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267,FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 1 6 6 111 3L 4126918 4126996 TCTCGAGGAGATTAACAAACTC 57 4126828 4126846 GGTGGACATAAGGTTTGCA 58 NA Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 1 1 1 82 3L 4115626 4122156 AATTAACTCCAAGTACAGCGAG 58 4115565 4115583 ATGTGTTGATGGGCTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 wit FBgn0024179 FBtr0073279 1 1 1 83 3L 4066268 4066354 CGGAACAGGGAATAAATATCATAGC 59 4066209 4066227 TAAGTCCCGTAGTGTCGGA 59 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073168 1 1 3 74 3L 3959966 3959986 GATAGTATTCAGCCCATGGAC 58 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073135,FBtr0110924,FBtr0073131,FBtr0073134,FBtr0110923,FBtr0110920,FBtr0110925,FBtr0302598,FBtr0073133,FBtr0110921 2 13 13 105 3L 3552857 3578301 CAGATTAACAATTTCCCGCGA 59 3578368 3578386 TTTGTTACCGTGGTTGTGG 58 NA Drosophila melanogaster 61 CG14971 FBgn0035449 FBtr0073143 2 1 1 146 3L 3469318 3469398 GTAATTGGAATCGAAGGTGCC 59 3469192 3469210 GAGCACCAAGAATTCGCTG 59 NA Drosophila melanogaster 61 CG34265 FBgn0085294 FBtr0112460 1 1 1 154 3L 3268517 3268535 TTTCACTGCTGCTCATTGC 59 3268715 3268738 CGTATACGTGCTGTAATAGTAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14958 FBgn0035413 FBtr0073039 2 1 1 149 3L 3190003 3190126 TTACTCGGTTTGATTGCCT 57 3190238 3190257 GAAGGTTTGGTTGGTATTCG 57 NA Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 1 2 2 210 3L 2587883 2588095 TTGTCAAGGACATCATCCAC 57 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072960,FBtr0072959 2 3 5 80 3L 2565617 2566218 ATAACTTCAAGCCATCGTTACC 58 2564713 2564733 CGCCCAATTCACTTAATTGTG 58 NA Drosophila melanogaster 61 Cpr62Bc FBgn0035281 FBtr0072869 2 1 1 117 3L 1841180 1841771 TCGATTACCATGCCTACCC 59 1841081 1841100 GAGTAGGATCCCTTGACGAC 59 NA Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 1 2 2 127 3L 1253219 1253309 CGAGTTCGATAGAGAATGCC 58 1253399 1253417 TCTTCTCCTGGATGAAGCG 59 NA Nonspecific Drosophila melanogaster 61 CG32334 FBgn0052334 FBtr0113434 2 1 1 204 3L 1112234 1112252 TTCTGATTCCGACGCTACC 59 1112048 1112066 TTGTAGCCATCATTTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cypl FBgn0035141 FBtr0072564 3 1 1 83 3L 542819 542837 GATCCCAACAATGCTGGTG 59 542662 542772 GGTGATTTCTCCCATGCTC 58 NA Drosophila melanogaster 61 CG13885 FBgn0260471 FBtr0100297 1 1 1 152 3L 391608 391627 CTATACACTCGCATCACCAC 58 390988 391496 GCACTTCATAACTGTAGTAGGG 58 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573,FBtr0072572 2 2 2 94 3L 335992 336010 TCGGACATGTTCTACACCA 58 335845 335935 GAGAACATCATGGCATACGA 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3316c FBgn0082970 FBtr0113519 1 1 1 60 2R 17217704 17217725 TCTACAATAGCTTGGGATTCAG 57 17217744 17217764 GGATGTTTACAATCTGAACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2949 FBgn0082981 FBtr0113494 3 1 1 64 2R 4982893 4982913 CTGCAAATCGAGTTCTACTGG 59 4982936 4982957 GCGCATCACAAATTAATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a14 FBgn0033302 FBtr0302331 1 1 1 80 2R 4452268 4452343 CAAGTGCTGTCGGAAACTC 59 4452206 4452230 GGGAATTTGGTAGTCTTTAGTAGTC 59 NA Drosophila melanogaster 61 5SrRNA:CR33369 FBgn0053369 FBtr0086361 1 1 1 60 2R 15647814 15647832 ATACATCGGTTCTCGTCCG 59 15647772 15647790 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp60F FBgn0259968 FBtr0300313 3 1 1 70 2R 21060174 21060192 TCTCAGAAGCTTTGCTACC 57 21060070 21060089 GGATGGACAGAATAAGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG15861 FBgn0035084 FBtr0072410 3 1 1 89 2R 20831281 20831356 ATCTGTGATCACAACTGCG 58 20831210 20831229 GTTGTGAGCATAATGGTGCT 59 NA Drosophila melanogaster 61 CG16936 FBgn0027590 FBtr0072436 1 1 1 83 2R 20655054 20655072 TTATGCCACCCTAAGTCCC 58 20654932 20655009 TTAATTGGCCGTAGTTCAAGG 58 NA Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 1 2 2 113 2R 20557266 20557284 ATTTGTTCGAACCGACTCC 58 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 Pros28.1B FBgn0017556 FBtr0072350 3 1 1 80 2R 20389126 20389328 GAGTACATAACCCGATACATAGC 58 20389068 20389087 ACAGGACAATCCAAATGGAC 58 NA Drosophila melanogaster 61 tsr FBgn0011726 FBtr0072188 1 1 1 97 2R 19932405 19932423 GAGTACATGCACCAGTGTC 58 19932263 19932344 TTCTTCTTGACCTTGGCAG 57 NA Drosophila melanogaster 61 Nxt1 FBgn0028411 FBtr0072241 2 1 1 69 2R 19699394 19699469 TGGACAGCGATTTGAAAGC 59 19699343 19699361 TAGTACAGGCGTGTGAAGG 59 NA DesignRelaxed Drosophila melanogaster 61 mRpL43 FBgn0034893 FBtr0072084 2 1 1 81 2R 19585981 19586000 AAGAGAATCCCGGGATTGTG 59 19586044 19586127 TCGCCGTTCAAGTACTCTC 59 NA Drosophila melanogaster 61 Klp59D FBgn0034827 FBtr0071968 3 1 1 60 2R 19030794 19030812 GTGCCAAGATTACGTGCAG 59 19030836 19030854 AGCAAGAGATCGAACACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071954,FBtr0071955 1 2 3 86 2R 18946809 18946886 GATACTGTAGCCCTCTTTGC 58 18946933 18946953 AAAGATGTCTCCGATGTTCAG 58 NA Drosophila melanogaster 61 CG32833 FBgn0052833 FBtr0071990 1 1 1 60 2R 18872148 18872167 CTTTAGCGATGGGATCACCT 59 18872107 18872127 CCTTTCGTTATAATGCCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 2 2 2 60 2R 18782192 18782211 GATCACCAGAATCTGAAGCC 58 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34446 FBgn0085475 FBtr0112750 1 1 1 103 2R 18535186 18535204 CTTATTGCAGGACCAAGGC 58 18535101 18535119 GTATACGCCCAGGTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GlcT-1 FBgn0067102 FBtr0071755 3 1 1 60 2R 17964228 17964249 AGATCAATAACATCCATCCAGG 57 17964267 17964288 TCTGAGATCATCACAAAGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 3 3 3 87 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608828 17609376 ATAGGCGATGATACCTCGG 58 NA Drosophila melanogaster 61 CG15674 FBgn0034642 FBtr0071659 2 1 1 67 2R 17519970 17520478 AAACGAGAAGGCAAACCTC 58 17520509 17520527 TATCTCGCCTGATTGTGGT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33655 FBgn0250824 FBtr0300632 3 1 1 78 2R 17207399 17207417 GATCTAACATGCGAGGCAG 58 17207278 17207299 TTGCTTTCGATTTACCATCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34203 FBgn0085232 FBtr0112396 2 1 1 149 2R 17169142 17169160 TCAGCAAAGAACAAGTCGA 57 17168952 17168971 TGATGTGAAACGATCTTGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9993 FBgn0034553 FBtr0071560 2 1 1 100 2R 16739277 16739295 AACACCACCTATCTCACCG 59 16739137 16739213 ATATAGGCCGTGGTTTCCG 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 3 2 2 93 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198932 16198951 ACTGATCAGACTAATCCGGC 59 NA InUTR Drosophila melanogaster 61 CG16898 FBgn0034480 FBtr0086325 2 1 1 80 2R 15891381 15891459 ATTCATGTGTCTGTTAGCCC 58 15891320 15891338 ACACTTGAGAAGTCTGAGC 57 NA Drosophila melanogaster 61 CG10822 FBgn0034478 FBtr0086339 1 1 1 136 2R 15838970 15839041 CAGAGACAGATCCAAAGCGA 59 15839140 15839158 CTCCTGACGATCCATCGAG 59 NA Drosophila melanogaster 61 CG30127 FBgn0050127 FBtr0086556 2 1 1 104 2R 15215767 15215785 CACCACCATTAACACGTCC 58 15215555 15215699 GAGTTGTCACCCATGTCCA 59 NA Drosophila melanogaster 61 Tab2 FBgn0086358 FBtr0086516 2 1 1 113 2R 15190279 15190297 TCAACATCCTGACTGAGCC 59 15190374 15190455 CCTGCGGTTCATTTAAGCA 58 NA Drosophila melanogaster 61 CG15083 FBgn0034399 FBtr0086618 2 1 1 127 2R 14722901 14722919 AAATCGATCTGACGGTGGA 58 14723008 14723795 AAAGGTAAGAACGTTTGGAGC 59 NA Drosophila melanogaster 61 CG30121 FBgn0050121 FBtr0086644 1 1 1 84 2R 14628761 14628779 TGATAGGACAAACCGGAGG 58 14628466 14628716 TCCATGTTTAGTGAATTTCCGG 59 NA InUTR Drosophila melanogaster 61 edl FBgn0023214 FBtr0086652 3 1 1 61 2R 14555884 14560459 TCGATCAAGAACTCAAACGT 57 14555842 14555861 TTGGTATAGCTCGATTCCAC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 1 6 6 129 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175124 14175142 ATATTCCACTCGTCCTCGT 57 NA Drosophila melanogaster 61 nopo FBgn0034314 FBtr0086750 2 1 1 106 2R 14068249 14068267 TATGCGCCGAATTGTTTGG 59 14068336 14068414 ACAGGTCTTTGATCGATCGA 59 NA Drosophila melanogaster 61 CG10912 FBgn0034296 FBtr0086807 2 1 1 99 2R 13944224 13944244 CAATTCCACCTTCGAATCCTG 59 13944053 13944163 ATATGTCGGACCCTCAGTG 58 NA Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 3 1 1 193 2R 13934663 13934681 CCACTTCCTATCAGGCCTG 59 13934307 13934506 AGATACATCACTCTCGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 2 1 1 152 2R 13479663 13479682 GAAACAGAGAAGCCCATCAG 58 13479466 13479548 GAGAGCTTGAGCAACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 1 2 2 60 2R 13390421 13390440 AAATCGTACTCTTCTGCCTG 57 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 robl FBgn0024196 FBtr0086920 3 1 1 81 2R 13344207 13344296 GGTCAACAATGAAGGTATTCCG 59 13344338 13344356 CAGCTGACTCATTAGGCCA 59 NA Drosophila melanogaster 61 Alk FBgn0040505 FBtr0087118 1 1 1 80 2R 12519813 12519831 AACTACTGGGATGTCCGAC 58 12519685 12519773 GGTGGTTAACTCAAGATAGTTGG 59 NA Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 3 2 2 80 2R 12008555 12008575 CCCGAATACTTTATGGACTCC 58 12008616 12008701 CGTCGATAGGAATCCAAAGG 58 NA Drosophila melanogaster 61 CG8370 FBgn0034060 FBtr0087203 2 1 1 81 2R 11889934 11889952 CATGAATGCGACACTCACG 59 11889992 11890068 GCTGCTGTATATCTCAAGTATCTG 59 NA Drosophila melanogaster 61 CG8320 FBgn0034059 FBtr0087202 1 1 1 96 2R 11880352 11880370 ACTTTCTACCGGAACATGG 57 11880430 11880507 TGTGCATAAACACTGAGGT 57 NA Drosophila melanogaster 61 Vha36 FBgn0022097 FBtr0087335 2 1 1 60 2R 11429587 11429607 GACTTTGGCCTACATCATCTC 58 11429628 11429647 CAGTCGGTAGAACTCCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 unc-5 FBgn0034013 FBtr0087382 1 1 1 80 2R 11245725 11245743 CAACTATAGCTGCAGTGCG 59 11245787 11246093 CCACCGTTGACATAAACGA 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833,FBtr0113485 2 6 6 80 2R 11154786 11154804 AGTGGAGACCATGTCTCAG 58 11154465 11154742 AACTCGATGTTCTGAACGG 57 NA Drosophila melanogaster 61 Cyp6a19 FBgn0033979 FBtr0087453 2 1 1 81 2R 10766321 10766342 GGAAAGGTACAATGGTAAACTG 57 10766381 10766456 CCTTAGCGATTCATTGATAACC 57 NA Drosophila melanogaster 61 CG10153 FBgn0033962 FBtr0087470 3 1 1 98 2R 10645182 10645200 GGTTTCCCAGAGCATTGTG 59 10645047 10645120 TCGTGGAGTCTTGTTTGCA 59 NA Drosophila melanogaster 61 CG13350 FBgn0033890 FBtr0087606 1 1 1 60 2R 9869156 9869174 GTGCTAACCATACCAGGAC 57 9869114 9869132 CAACCATTAGGCTGTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6701 FBgn0033889 FBtr0087607 1 1 1 83 2R 9861905 9862103 CAAGCGAAAGAACCATGCA 59 9861840 9861858 TCATTCCCGAGGTTAAGCA 58 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 1 2 2 102 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459376 9459396 TTCCTAATGCGATTATCAGCC 58 NA Drosophila melanogaster 61 Roe1 FBgn0014877 FBtr0087675 2 1 1 126 2R 9442173 9442536 TGCCCAAGGATAAGCTCAG 59 9442626 9442644 TGGTTGATGGGATCCAGTG 59 NA Drosophila melanogaster 61 CG4744 FBgn0033834 FBtr0087717 1 1 1 103 2R 9283157 9283175 GTCTCCAAAGAAGCCACAC 58 9282999 9283017 ATTTCAATCCGAGGTCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG30058 FBgn0050058 FBtr0087767 1 1 1 80 2R 9098390 9098409 TTCGTGTGCATTAAATTGGG 57 9098188 9098350 CAAGCAGACTGCAATAATTAGG 57 NA Nonspecific Drosophila melanogaster 61 CG13326 FBgn0033794 FBtr0087779 2 1 1 81 2R 9018353 9018426 CCAGCTTCTAATGCGTTCC 59 9018290 9018308 AGCCTCGTCGATTAGAGTG 59 NA Drosophila melanogaster 61 CG13169 FBgn0033704 FBtr0087997 1 1 1 87 2R 8129155 8130056 CGGAAGTGATATTGAAATGCGT 59 8130104 8130122 CTGACTGCTTTGAGCATCG 59 NA Drosophila melanogaster 61 CG13171 FBgn0033701 FBtr0087995 3 1 1 60 2R 8101762 8101780 CCAACTGAAGGGACTTTCG 58 8101804 8101822 CTCGTACGAGTCGTACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Drep-1 FBgn0024732 FBtr0087978 3 1 1 83 2R 7935624 7935642 TGAGGAGTACTTTCGCACC 59 7935688 7935990 TAGTGAGTGGGATCGATCCA 59 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 2 2 2 80 2R 7837686 7843102 CTATACAAGGAGCACATTCAGG 58 7843143 7843161 GAAGACGATCACTTTGGCC 58 NA Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 1 2 2 103 2R 7540579 7565721 TCAAGTTATGGATTCCTGCCT 59 7540496 7540514 GAAAGGAGTGGTTGCACTC 58 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 3 2 2 175 2R 7300282 7300300 TTGATCCCTCCCTGAACTG 58 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA DesignRelaxed Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 2 2 2 81 2R 7219882 7219954 AGATCAAGACATCCGTGCT 58 7219999 7220017 TCCATTGCAGCGTTATCTG 58 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 3 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 CG7637 FBgn0033548 FBtr0088252 2 1 1 84 2R 6698257 6698340 TTACACCCTGAAGAAACGC 58 6698191 6698209 GGAGTACTTATCCTCCGGT 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299830 3 1 17 75 2R 6172253 6172271 AGACGAGCATCGTGAAGAC 59 6172918 6172936 GATTCGGAATCTGTGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG12209 FBgn0033498 FBtr0088364 3 1 1 80 2R 6134835 6134853 TACATGGTGACCATAGCCT 57 6134717 6134796 GGTCATACTTATGTCCGATATCAG 58 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088420 3 1 3 134 2R 5998030 5998049 TTGTACATCCAGTCAAGCCT 59 5999072 6000131 TGAAGTAGACCTTGCAGCC 59 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 2 2 2 118 2R 5937146 5937272 AGAGAATCTTCCCTTCGGG 58 5937354 5937372 ACTTCTTGAGCAGTTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 2 4 4 101 2R 5880408 5880493 CGGACAGAACTTCAGATTCC 58 5880557 5880575 TAAAGATCATCGTCGCCGT 59 NA Drosophila melanogaster 61 eve FBgn0000606 FBtr0088390 2 1 1 161 2R 5867050 5867140 CGCCAAATGAATGCCTATCC 59 5867264 5867282 GACGGGACACGTAGTTCTC 59 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 1 2 2 80 2R 5320558 5320644 ATCTATCTAAAGGCTCTGTCCG 59 5320685 5320703 GGCGCGATAGAACTTTGAG 59 NA Drosophila melanogaster 61 CG8801 FBgn0028473 FBtr0088554 3 1 1 141 2R 5285615 5285702 CATTTGGTGGACAATGTGG 57 5285492 5285510 GATACGTCAGATTGGAGGC 57 NA Drosophila melanogaster 61 Rme-8 FBgn0015477 FBtr0088618 2 1 1 80 2R 5056409 5056429 CTGTTCAATCTGCTCTCAGTG 59 5056289 5056367 ACTCACGCAGAACTCAGAC 59 NA Drosophila melanogaster 61 Prp38 FBgn0050342 FBtr0088582 2 1 1 60 2R 5032061 5032081 CATGGATGAGTACATTGACGA 58 5032103 5032121 GGGCAGTATAATGTCGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8237 FBgn0033350 FBtr0088653 1 1 1 60 2R 4813720 4813743 CTGTTCAACATAGAGTTCGATGAG 59 4813762 4813780 AGAGGTCTTCTTGGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088646 1 1 5 120 2R 4788921 4788941 CACATCACTAGTTTGGGTGTG 59 4789023 4789655 ATCTTAATGGCTGGCAGCT 59 NA InUTR Drosophila melanogaster 61 CG30350 FBgn0050350 FBtr0088636 3 1 1 60 2R 4714987 4715006 TTACCGTGGTCAATGGATCC 59 4715028 4715047 CATATCTTGCTGCCCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LvpD FBgn0002569 FBtr0088747 2 1 1 100 2R 4342565 4342583 AACTTAAGAGCAGTTCCGC 58 4342645 4342726 CTTGTTTGTGCGAATGATCTG 58 NA Drosophila melanogaster 61 Pbp49 FBgn0260398 FBtr0300659 1 1 2 80 2R 4018672 4018774 ACATTTCTAACAAGGGCCCA 59 4018611 4018629 CTCTGTGTCCTCGTACTCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1946 FBgn0033216 FBtr0088929 2 1 1 83 2R 3602549 3602569 CGTCATTCTTCACCTATACCT 57 3602614 3603052 ACATTTCGCCGTAGTACAG 57 NA Drosophila melanogaster 61 CG12042 FBgn0033206 FBtr0088944 2 1 1 60 2R 3554979 3555000 TAAACAATGCGCAAGAGAAGAG 59 3554940 3554958 ATAAACACCCTGGAGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpt1 FBgn0028687 FBtr0088947 3 1 1 60 2R 3541270 3541289 GGACAAGGAGATCAAGTCCC 59 3541229 3541250 CTGCCCATAAGTCTTTAGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boca FBgn0004132 FBtr0088953 2 1 1 92 2R 3453844 3454027 TCAATGGGAGGAAGATGAAGAG 59 3453773 3453791 CTGTCCAGATTGCTCAGGT 59 NA Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 3 1 1 61 2R 3379386 3379468 AGGATGTGAATTTGCCAGC 58 3379343 3379361 AAAGTTGTCCCTCAGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11145 FBgn0033168 FBtr0089004 1 1 1 80 2R 3315584 3315664 GTATCTCCTTCGACTATATGCG 58 3315525 3315544 AAGTAGGGATCGAAGGACTC 58 NA Drosophila melanogaster 61 Cyp9b2 FBgn0015039 FBtr0089055 2 1 1 95 2R 3019315 3019397 TCGTCAACACAAACTGGTG 58 3019238 3019256 AAGTCCTTTACGCAGACCT 58 NA Drosophila melanogaster 61 CG3420 FBgn0033100 FBtr0086135 3 1 1 196 2R 2644590 2644608 CAATGAGCCCATTTGAGCT 58 2644350 2644430 AACTGTAGCATGCCTTGAG 57 NA InUTR Drosophila melanogaster 61 CG9430 FBgn0033097 FBtr0086138 2 1 1 60 2R 2606403 2606421 GATCATGATGGCCCATACC 57 2606361 2606379 GATCGAGAAGACGAGGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6w1 FBgn0033065 FBtr0085987 2 1 1 80 2R 2061658 2061801 GTATCCTCTAATGGTGAAGATTGG 58 2061839 2061858 TTCACTTGGACTTCCGTACC 59 NA Drosophila melanogaster 61 CR33987 FBgn0053987 FBtr0100032 2 1 1 60 2L 22019435 22019455 CTCGACCTACGACTAAATTGC 59 22019477 22019495 TCGAGGTCTGTTAATTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9323 FBgn0032883 FBtr0081459 1 1 1 86 2L 20755421 20755496 CAACTACAAATTTCTGGCATCG 58 20755356 20755374 ATAATGGCCCTCAGTAGGG 58 NA Drosophila melanogaster 61 ns4 FBgn0032882 FBtr0081409 1 1 1 127 2L 20753102 20753187 ACTTTAAGGAATACGTGGACGA 59 20753275 20753293 GATGTCCGAGAACTCCAGG 59 NA Drosophila melanogaster 61 Arc-p34 FBgn0032859 FBtr0081358 1 1 1 80 2L 20420404 20420501 AAAGTTCGGATCAGCATATCG 58 20420541 20420561 ATATTCACGCTTCAGCAACTC 59 NA Drosophila melanogaster 61 CG10651 FBgn0032853 FBtr0081378 1 1 1 239 2L 20134271 20134339 AATCAGCAGGAACTGTCCA 59 20134050 20134071 GTGGCAAAGATTCTTGTATTGC 58 NA DesignRelaxed Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 1 2 2 80 2L 20060345 20060422 GCAACTTCAAGATGGCTGG 59 20060283 20060302 CGTCCAAGTAGATGGAGTCC 59 NA Drosophila melanogaster 61 scw FBgn0005590 FBtr0081261 1 1 1 60 2L 19699761 19699779 GACATCATCGACCTGACCA 59 19699719 19699738 TCTAATGACATCCGCACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Side FBgn0032741 FBtr0081141 2 1 1 68 2L 19029054 19029072 GGACATCCTGGAGCTAACC 60 19029104 19029310 TTGTTAACCGTGGGATCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 3 4 4 109 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856750 18856771 AACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 CG33120 FBgn0053120 FBtr0081118 3 1 1 94 2L 18844479 18844501 GGTGTACATACTATAGTGCAGCT 59 18844338 18844425 TCCTGCCAGAAACTTTCCA 59 NA InUTR Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0273194 1 1 2 169 2L 18689702 18689786 CTGTGAATGTTTCGGCCAC 60 18689919 18689937 CTGGCTACCAGGTTCTACG 60 NA InUTR Drosophila melanogaster 61 CG31790 FBgn0051790 FBtr0081076 2 1 1 90 2L 18667669 18667687 CTTAATGCCCTGAAGGAGC 58 18667537 18667617 CGCGCATAGAATTTATTAGCG 58 NA Drosophila melanogaster 61 CG31802 FBgn0051802 FBtr0081058 1 1 1 60 2L 18209035 18209053 CAAACTGCCGACCTTTGAC 59 18208993 18209014 ATCGAAGGCTTTCTTAATGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42400 FBgn0259819 FBtr0300108 3 1 1 80 2L 18193057 18200633 TATCAGCACAGTTCTGGGC 59 18192995 18193013 CGATCTGCTCCAGAGTCAG 59 NA Drosophila melanogaster 61 Dhc36C FBgn0013810 FBtr0080985 2 1 1 80 2L 17508158 17508235 CGATAACCTCAAGGCTCTC 57 17508279 17508297 GAGTACAGCTCAATCTCCG 57 NA Drosophila melanogaster 61 CG5110 FBgn0032642 FBtr0080983 1 1 1 60 2L 17481347 17481368 TCAAGAAGTATTTAGACGGCCT 59 17481463 17481485 GTAATCTGAATAACGTACAGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 pkaap FBgn0040079 FBtr0080826 2 1 1 82 2L 16290138 16290158 TTCGCTGACTTTCTAAAGTCG 59 16290199 16290289 GGATGAGTGGTGGAATTATCTC 58 NA Drosophila melanogaster 61 beat-Ic FBgn0028644 FBtr0080801 2 1 1 181 2L 16034309 16034583 AAATGGAGGTGGTTGAGCT 59 16037153 16037173 CGTCTGGTAGGTCTTTATGTG 58 NA Drosophila melanogaster 61 vas FBgn0003970 FBtr0080701 1 1 1 80 2L 15073366 15073385 CTTGCTCTGATGTGAAGCAG 59 15073424 15073504 GCTCGGAAAGGATTTCTATTAGC 59 NA Drosophila melanogaster 61 CG42587 FBgn0260955 FBtr0301742 2 1 1 153 2L 14745168 14745186 GATGGACCTTAAGTGCTGC 58 14744946 14744964 AAGTTAGTTCACTGCTCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080529 2 1 2 84 2L 13708887 13708960 GGATTGAAGGTTTACGACTGG 59 13709006 13709024 ACTCATACATGGTGGCCTC 59 NA Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080530 3 1 2 112 2L 13708888 13708983 GATTGAAGCATCCAATATCCG 57 13709057 13709075 CATCATAGTAGACGACGCC 57 NA InUTR Drosophila melanogaster 61 CG31847 FBgn0051847 FBtr0301009 3 1 1 117 2L 13497430 13497512 TCTCATAGGATTGGGCCTG 58 13497593 13497611 TGCATCAATCTTGTTGCCG 59 NA Drosophila melanogaster 61 CG16957 FBgn0032519 FBtr0080523 3 1 1 60 2L 13396013 13396031 AAACACCCATCGATGTCAC 58 13395971 13395990 AATCCCAACTTGAGGAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15482 FBgn0032483 FBtr0080487 1 1 1 60 2L 13211683 13211701 GAATCGAAAGCGTCAGGAG 58 13211641 13211662 GTACAGCAAATCTTGCATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Edem2 FBgn0032480 FBtr0080438 2 1 1 83 2L 13194888 13194906 TGAGTTCGTCTTCACGACC 59 13194953 13195145 GTCTGGCGAAAGCTAAACG 59 NA Drosophila melanogaster 61 CG17036 FBgn0032449 FBtr0080408 2 1 1 80 2L 12699822 12699840 TTCCTACTCCAATCCCGTC 58 12699696 12699781 TAGGAGATCACTTGAACTTGAC 57 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 1 1 8 140 2L 12482619 12482639 TGTATCCAAGTATTTCGGGCA 59 12458214 12477123 TGACCAGATCCATTGCCTG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 3 1 8 83 2L 12516484 12516502 CGGATACCGTTATCAGCAG 57 12458211 12477120 ACTTGACCAGATCCATTGC 57 NA Drosophila melanogaster 61 CG5435 FBgn0032431 FBtr0080387 1 1 1 88 2L 12430337 12430355 AATCATTTCGGGTGTTGCG 59 12430183 12430285 TTTACAACCGCCTATGCGA 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 3 4 4 123 2L 12385729 12389196 GGAGCTATAAAGGCCCTCC 59 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 Rab6 FBgn0015797 FBtr0080361 2 1 1 60 2L 12108697 12108715 ATTACGCGCTTCATGTACG 58 12108655 12108673 AATCAATTCCGATCGTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab6 FBgn0015797 FBtr0080361 1 1 1 60 2L 12108696 12108714 TTACGCGCTTCATGTACGA 59 12108654 12108673 AAATCAATTCCGATCGTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0080329,FBtr0110911 1 2 2 60 2L 12096755 12096774 GTTTATGCGCACAATTACGG 58 12096795 12096815 CACTCAGGCTTTGAATATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6712 FBgn0032408 FBtr0080364 3 1 1 60 2L 12095891 12095910 CAACTGGACGATTTCAGCTC 59 12095850 12095868 AAGTGATCAGCACCTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0080234 2 1 2 101 2L 11076856 11076936 ACAGACCCACCAGTTACAG 59 11076773 11076791 GCCGGTATCTAACTTGACG 58 NA Drosophila melanogaster 61 CG18666 FBgn0040967 FBtr0080160 1 1 1 60 2L 11034895 11034913 ATGATTCCAGTGACGACGA 58 11034934 11034955 GTAGGATCGGAATACTGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14072 FBgn0032318 FBtr0080145 1 1 1 80 2L 10937388 10937408 GATGGTCTACAATATGCGGTC 58 10937449 10937526 CGAGAGTTGAGACACATTCG 58 NA Drosophila melanogaster 61 Porin2 FBgn0069354 FBtr0080184 1 1 1 86 2L 10846630 10846648 GTGAGATTATGCACCGGGA 59 10846496 10846580 CATCCGCCTCATTTGATCC 58 NA Drosophila melanogaster 61 Lrr47 FBgn0010398 FBtr0080092 2 1 1 85 2L 10517923 10517941 AGTGAAGCTGAGCTTCGAG 59 10517990 10518069 CCGAGGGAATCTTGGTCAG 59 NA Drosophila melanogaster 61 CG5337 FBgn0032249 FBtr0080043 1 1 1 86 2L 10433910 10433930 GATAATCCCAATACCGAGGTC 57 10433770 10433863 ACTCATACCCTGGGAATAGG 58 NA Drosophila melanogaster 61 RpS27A FBgn0003942 FBtr0080016 2 1 1 111 2L 10410039 10410249 GAAATACTACAAGGTTGACGAG 57 10410321 10410339 GTAGTGACGATCTTCGTGG 58 NA Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 1 2 2 88 2L 10343347 10343423 ATAATACTACCGTCAAACGCG 58 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 2 4 4 127 2L 10248910 10249108 CAAGGAATAGTATGCGCCG 58 10248801 10248822 AGCTTCATTAGCTTGAATTCCC 59 NA Drosophila melanogaster 61 CG31755 FBgn0051755 FBtr0079972 1 1 1 88 2L 9999164 9999182 GCTGGAAGAACTAAGTGCG 58 9999028 9999112 TCAACCGATTAGGGCTCTG 59 NA Drosophila melanogaster 61 CG17633 FBgn0032144 FBtr0079868 1 1 1 60 2L 9769671 9769690 CGCCACCTTTATCATCAACC 59 9769711 9769731 GGCCAATTCCTTGATGTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pelo FBgn0011207 FBtr0079847 1 1 1 80 2L 9702053 9702071 AGAAACATGTCCTCCAAGC 58 9702114 9706650 CGTCTTGGCATCTAAAGAGG 59 NA Drosophila melanogaster 61 CG34182 FBgn0085211 FBtr0112375 1 1 1 60 2L 9437057 9437075 CAAGATGCAATTCATGCGG 58 9437097 9437117 GAAATCCACGATATCTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Peritrophin-15a FBgn0040959 FBtr0079713 3 1 1 93 2L 8396053 8396071 AATTGCACCATGAAGTCCG 58 8395907 8395925 TGTCAGAATTGGGATCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13392 FBgn0032033 FBtr0079720 3 1 1 124 2L 8382516 8382600 AATAGGCGAAGTATGGTCGT 59 8382411 8382429 ACAATCGACCATGTCCTCC 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 3 6 6 86 2L 8262337 8262357 CAACGGAACTCTATTGGATGC 59 8262206 8262289 AAGTGGGAGTTGTCCTTGG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302147,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 1 9 9 80 2L 8225507 8225685 ATCAGAACTTTAGCTTGCCG 58 8225376 8225394 GTTCCACACTCAGCTTTCC 58 NA Drosophila melanogaster 61 Mcr FBgn0020240 FBtr0079543 2 1 1 81 2L 8079815 8079833 GGATTTGACAATCCCGTCG 59 8079657 8079771 AGTTTGATTGACGCGATAGC 59 NA Drosophila melanogaster 61 Rack1 FBgn0020618 FBtr0079565 1 1 1 92 2L 7827119 7827137 CATTGGCCACAATGGATGG 59 7826966 7827063 ACGATCAGGGTCTTGTCAC 59 NA Nonspecific Drosophila melanogaster 61 CG7211 FBgn0031941 FBtr0079481 1 1 1 105 2L 7747382 7747402 TGAGTCAATTGATTGCCAAGG 59 7747522 7747540 GGTGATAGCTCCACCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 3 3 3 108 2L 7057578 7057596 ATCGAGCTGTCTTTGACGA 59 7057668 7057875 TGTCATTTCCACCTGTCGT 59 NA Drosophila melanogaster 61 neuroligin FBgn0031866 FBtr0079344 1 1 1 80 2L 6901406 6901425 TGAAGAACCAATCGGAAGAC 58 6901468 6902258 CATCGGTGTTACGTCTCTG 58 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 2 3 3 83 2L 6325594 6325724 AGCATGGATAGTCTTACCGTG 59 6325769 6325787 TTCCACATCTTCCTCGCTG 59 NA Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 1 2 2 83 2L 6072603 6072621 ATAGATTCCGCGCTATGGG 59 6072666 6072743 CTGTTGTGAGGTAAAGATGGG 58 NA Drosophila melanogaster 61 CG34180 FBgn0085209 FBtr0300048 3 1 1 83 2L 6060607 6060681 GCCAAGGAATATCAGTTCATCC 59 6060725 6060743 GCATATGCTTAAGGGACCG 59 NA Drosophila melanogaster 61 dsf FBgn0015381 FBtr0079145 3 1 1 281 2L 5937207 5937225 TCTGGTGTAGGTTCCACCT 59 5937470 5937584 CTTCCAGGATTCCTGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 2 3 3 80 2L 5769936 5770024 AAGGCACCCAGAGTATTTCC 59 5769875 5769894 CTGTAGCTCTGTCTTGTCGT 59 NA Drosophila melanogaster 61 CG6907 FBgn0031711 FBtr0079096 3 1 1 60 2L 5524847 5524867 TCTGATGGAACAGATGGACTC 59 5524889 5524907 ATCGTCCCACAAGGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 1 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Jon25Biii FBgn0031653 FBtr0079056 3 1 1 60 2L 4950668 4950688 AAGGTCTTCGTAAAGGACCTG 59 4950628 4950646 ATCCGTTGGTGATACGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15631 FBgn0031626 FBtr0077419 1 1 1 105 2L 4734384 4734402 AGTCAGAACTCGAACCAGC 59 4734246 4734318 TATTGTATTCCGGATCTGAGCT 59 NA Drosophila melanogaster 61 HP6 FBgn0031613 FBtr0077444 3 1 1 61 2L 4577825 4577843 GTCGGACAATGGGTATGAG 57 4577782 4577800 ACTAGGCATTTCGTGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp24F FBgn0259958 FBtr0300304 1 1 1 80 2L 4441918 4441990 CTAGAAATGTTGCCGGAGC 59 4441856 4441876 TGAGATAGTAACTGTTCCCGA 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 1 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343807 4343825 AGTAGAAGGCCTTCAAGGA 57 NA Drosophila melanogaster 61 CG31957 FBgn0051957 FBtr0077514 3 1 1 94 2L 3871861 3872182 ACGTTCCTTGTTTCGATGC 59 3871785 3871803 TTATCGCCCTCCTCAATCG 59 NA Drosophila melanogaster 61 CG31772 FBgn0051772 FBtr0077489 1 1 1 80 2L 3766035 3766583 ACAGCTTCCAATTAATAGCGTC 59 3766622 3766642 AGAGCATCAGTTTCAAGACCT 59 NA Drosophila melanogaster 61 CG15418 FBgn0031554 FBtr0077556 1 1 1 80 2L 3621313 3621396 GATAATAGCCTGCAGACAGC 58 3621252 3621270 CCGGTCTTCTTGTTGTAGG 57 NA Nonspecific Drosophila melanogaster 61 CG17593 FBgn0031544 FBtr0077525 2 1 1 104 2L 3515270 3515731 ACTTCCAGGATGAGGAAGAG 58 3515795 3515816 GAGGGATGTTTGGTATGTTCAG 59 NA Drosophila melanogaster 61 CG33123 FBgn0053123 FBtr0077562 2 1 1 80 2L 3512829 3512912 TATCTGAAGAGTTTCTATGACGGAG 60 3512773 3512792 CAGATCCTTCTTCACGTCCT 59 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 3 3 3 83 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336330 3336350 AATAATAGGCGGATAGTCGGT 58 NA Drosophila melanogaster 61 CG17260 FBgn0031498 FBtr0077653 1 1 1 60 2L 3038303 3038324 GTCCCATATGTGATAGTACCGT 59 3038343 3038363 TTGTCATCCGTTTCTATGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 1 2 2 81 2L 2309693 2310136 GATTTCCTCAACGATTACAGC 57 2309632 2309650 GATCGAACTCCACGATGTC 58 NA Drosophila melanogaster 61 CG17234 FBgn0042187 FBtr0077753 2 1 1 60 2L 2253465 2253483 CACAAGCAAAGTTCAACCC 57 2253505 2253525 GGCAATCGATCTAGGATAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7261 FBgn0027509 FBtr0077829 2 1 1 117 2L 2150787 2150862 GAATCTCTTATCAAGTATGCCTCC 59 2150936 2150956 CGTTTAGTAGATGCTCCTCGA 59 NA Drosophila melanogaster 61 Nplp4 FBgn0040717 FBtr0077817 2 1 1 164 2L 2008532 2008681 GTTCAAGCTGCTGGTTGTC 59 2008808 2008827 TAGTATCCTCCGGAGTAGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077867 2 1 3 60 2L 1987611 1987629 TTTGTTGATCAGCAACCGA 58 1986090 1987588 GGAGAACCATGTTGATTTGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG33128 FBgn0053128 FBtr0077930 3 1 1 60 2L 1494596 1494615 AACTTCTCCATCCAGTACGG 59 1494638 1494656 TCACCGTATCTATGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pon FBgn0025739 FBtr0070681 3 1 1 109 X 4530939 4531152 AATCCATATGAGGTCGTCCG 59 4531224 4531242 ATCTCGAAGGGATTGAGCG 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611,FBtr0085261 1 2 2 81 3R 23798693 23798711 ATCTCGAAGATTCGCGAGG 59 23795537 23798648 CAGTGTCGGATACCTTGGG 59 NA Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 3 2 2 185 3R 20874275 20874293 AATCTCAACTGCTACGCGA 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 CG13836 FBgn0039060 FBtr0084370 1 1 1 60 3R 18995835 18995854 GATAAATCGGAACTGGTGGG 58 18995877 18995895 TATCCTTCTCATCGGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 2 2 2 80 3R 18901407 18901427 ACAAGATGCGCAACTATAACG 59 18901115 18901367 ATGGATAGGCATTCAAGTTGC 59 NA Drosophila melanogaster 61 CG4725 FBgn0039022 FBtr0084319 3 1 1 60 3R 18585779 18585798 CGAGATGGGAAATCACTTGG 58 18585738 18585758 GTACTGACTCTCCAGGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ninaE FBgn0002940 FBtr0083857 2 1 1 107 3R 15712535 15712553 AAGTTCGAGGGCCTTACAC 59 15712378 15712464 GCGATATTTCGGATGGCTG 59 NA Drosophila melanogaster 61 ald FBgn0000063 FBtr0083478 3 1 1 86 3R 13499121 13499139 ATGAGTGCAATCACCACAC 58 13499189 13499307 CTTGGCCATATGAACCAGC 59 NA Drosophila melanogaster 61 Gr85a FBgn0045473 FBtr0082216 1 1 1 80 3R 5821529 5821548 GGATCATTAGTGGAGGTGAC 57 5821416 5821487 CCATTCGATACTTCGTTCCA 57 NA Drosophila melanogaster 61 dj FBgn0019828 FBtr0089741 3 1 2 61 3R 2885194 2885293 CCTTGAGAACTTTAAGGAAGGG 58 2885315 2885333 TTGCGGATCGTGAATAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6865 FBgn0036817 FBtr0075060 3 1 1 114 3L 18857685 18858016 CACGATATAGCCCTCCTGG 59 18858094 18858112 CTGTTCCGTACTCCTGCTC 59 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566,FBtr0100567,FBtr0075111 3 3 3 80 3L 18594289 18594371 GGGACTTGGTCACTATTTCGA 59 18594229 18594251 GTCAGCATATAAGTGTGATTGGG 59 NA Nonspecific Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 1 2 2 80 3L 16621685 16621778 GGAGCATCAGTTTGAGATACG 59 16621625 16621644 GGGTAACGAAGACTTTCCCA 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 2 4 4 80 3L 11030771 11030789 TTTGGCTTCCTGAAGTACG 57 11030643 11030727 GGATTGGGCCAACTTATCC 58 NA Drosophila melanogaster 61 CG4250 FBgn0034761 FBtr0071865 3 1 1 135 2R 18551367 18551499 GTGATATTGCAGGCTCCAC 58 18551598 18551616 AGATGAGTAGGGCCAACAG 58 NA Drosophila melanogaster 61 CG11041 FBgn0034481 FBtr0300692 2 1 1 92 2R 16034137 16034155 AAATGGACGAAATGTGGCC 59 16034208 16034290 CTTACAGATAGACCATGAGCTG 58 NA Drosophila melanogaster 61 Hs3st-A FBgn0053147 FBtr0086608 3 1 1 81 2R 14633670 14633688 ATACCACCAGAGACAGCAG 58 14633731 14635565 CGGTAGCCATAGGATATCCAG 59 NA Drosophila melanogaster 61 Nedd8 FBgn0032725 FBtr0081192 3 1 1 196 2L 18951529 18951708 TCAAAGTGAAGACCCTGACC 59 18951292 18951310 GTGAAGAACGGATCCACCT 59 NA Drosophila melanogaster 61 CG13283 FBgn0032613 FBtr0080928 1 1 1 60 2L 16836063 16836084 TATCAACTTCATACCACTCGCT 59 16836024 16836044 AATCTCTTCTGGACAACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17906 FBgn0032086 FBtr0079762 2 1 1 174 2L 8994721 8994741 CTATTTACCTGCACTTACGGG 58 8995014 8995097 CTGGCATGGTTAATGATAGAGC 59 NA Drosophila melanogaster 61 nop5 FBgn0026196 FBtr0079369 3 1 1 76 2L 6917351 6917369 GCCAAGTTCGAGAAGTACC 58 6917115 6917134 TTCACGTTCAAGGTGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 3 2 2 60 2L 5039691 5039709 TCTACAAGGATGGCAAGTG 57 5039733 5039819 GGCTCATCAATCTGATCCA 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 2 2 5 184 2L 835541 835715 TCTTTACGTGGAGTGCTCC 59 835375 835393 CTGAACATTGCCACTGGTG 59 NA Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0112854 1 1 2 254 2L 548205 549030 CAATGATCCGTACCAGCTG 58 547892 547987 TAGTAGTACCTGAGTGCCC 57 NA DesignRelaxed Drosophila melanogaster 61 ds FBgn0000497 FBtr0078045 2 1 1 81 2L 644483 644503 CAGATCGTCGATGTGAATGAC 59 644300 644442 CTCCAAGTTCAGTAGCTTCAC 58 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 3 3 3 63 3L 4262982 4263002 CAAATGAATCCCTTGATCGGG 59 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9603 FBgn0040529 FBtr0081855 1 1 1 100 3R 4166490 4166649 ATGAACCTGTCGAGAGCTG 59 4166408 4166428 ATCTCGAAGTATCCCTTCTCG 58 NA Drosophila melanogaster 61 RpL37b FBgn0034822 FBtr0071978 2 1 1 117 2R 18987790 18987808 AGAAATCGAAGTGCTCCCA 59 18987691 18987709 TTCTTGAGGTACCGCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 2 2 2 77 2L 10766269 10766402 ACTGTAATCCAGCCGATCC 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 sala FBgn0003313 FBtr0080237 3 1 1 88 2L 11486214 11486305 AACTACTGATTGCTCTGTTTGC 59 11486354 11486372 TTGCCCTCCATATCCTCCT 59 NA Drosophila melanogaster 61 CG9454 FBgn0033112 FBtr0300358 1 1 1 75 2R 2767405 2767424 AGATTCCTAGCTTTACAGCC 57 2767291 2767309 AATATTCGGTTCATGCCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG3430 FBgn0031875 FBtr0079350 3 1 1 100 2L 6958203 6958221 ATCAAATTCTGGAGCTGCT 57 6958282 6958361 TGTCTCATAATCCTTCTTTGGG 58 NA Drosophila melanogaster 61 vkg FBgn0016075 FBtr0079036 3 1 1 83 2L 5013430 5013511 TACAGTTACTTCATGAGCACC 57 5013367 5013385 GAACTCCTCCAAGCAAGAG 57 NA Drosophila melanogaster 61 Ste:CG33240 FBgn0053240 FBtr0300089 1 1 1 110 X 13949863 13949881 TCTGATACACAGCTGGACG 59 13949711 13949789 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31102 FBgn0051102 FBtr0084862 1 1 1 87 3R 21120544 21120826 GTTGAAAGATGGATTCTCACAG 57 21120478 21120496 GGTATTCACGAATCCACCA 57 NA Drosophila melanogaster 61 CG6432 FBgn0039184 FBtr0084606 3 1 1 83 3R 20164946 20165028 CTACGACGTCAAGATCCTG 57 20165075 20165093 GGCAGTGGTAGCTTAAGAG 57 NA Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 2 1 1 60 3R 13508835 13508915 CATTATTTGATCGTCAACTGGC 58 13508936 13508954 CCACATCGATTTGCCACAG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0302135 2 1 2 102 3L 11816657 11816767 GAGAGCCTTGTTGAAGCAC 59 11816832 11816851 CATGAAGTCGACGTTGTTGG 59 NA InUTR Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072957,FBtr0072960,FBtr0072959,FBtr0072956 1 5 5 80 3L 2557073 2557153 ATCTATCTTCCCAAGCATACTC 57 2557014 2557032 CAGTTGCATGCCATTTGAG 58 NA Drosophila melanogaster 61 Art6 FBgn0038189 FBtr0082878 2 1 1 115 3R 9771191 9771211 CAATCAGAAGGAGAATGTGGT 58 9771038 9771114 ACAGAGCATTTCCCATCCA 59 NA Drosophila melanogaster 61 kl-5 FBgn0001315 FBtr0113891 2 1 1 80 YHet 30452 30525 TATGATTGACCCTCAACTTCAG 58 30564 30584 TGCGAAAGTCTAAGTACTACC 57 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807,FBtr0300806 1 2 2 86 XHet 57051 57073 CCTCTTTGTTCTTAATCTTCCCG 59 57119 57600 TCCTCGTCGTTAAGATGCT 58 NA Drosophila melanogaster 61 tRNA:S4:12Ee FBgn0011977 FBtr0073872 1 1 1 60 X 13997446 13997464 AGTGGTTAAGGCGTCTGAC 59 13997404 13997422 GTAGGATTCGAACCTACGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4768 FBgn0030790 FBtr0074332 3 1 1 93 X 16686760 16688332 GTACAGAGAACGCTCATCG 58 16688388 16688407 GTAGAGTGTTGTCACAGTGC 58 NA Drosophila melanogaster 61 CG9777 FBgn0030764 FBtr0074287 1 1 1 71 X 16525850 16525868 GCATGGAAAGAAGTTCCCA 58 16525733 16525751 GGAAGTATCCATCACAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33246 FBgn0053246 FBtr0300095 2 1 1 110 X 13942248 13942266 TCTGATACACAGCTGGACG 59 13942096 13942174 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG4330 FBgn0030452 FBtr0073724 1 1 1 173 X 13025867 13025886 CCTCCTGTTACTACGATCCA 58 13026982 13027000 AAATGTGACGCGTCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1789 FBgn0030063 FBtr0071251 1 1 1 100 X 8615095 8615115 TTAAAGCATGATGACGAGGAG 58 8615301 8615319 TTCTTCAGCTCGTTGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 Nek2 FBgn0029970 FBtr0071142 3 1 1 60 X 7785278 7785299 TGTGCAATACTACCATCATCTG 58 7785239 7785260 CTCCATAACAATGTACACCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14434 FBgn0029915 FBtr0071040 1 1 1 60 X 6746500 6746518 CGCAGTTAATCGAGCAGAG 58 6746458 6746476 AATTTAAGCCGTCCACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht11 FBgn0029913 FBtr0071041 2 1 1 97 X 6742653 6742673 ATCAATTACACGGTTCAGTGG 58 6742511 6742597 TTAACCAACGTAAATGAGTGGC 59 NA Drosophila melanogaster 61 Mcm6 FBgn0025815 FBtr0070952 2 1 1 60 X 6568776 6568794 ATCTATCCGTTCCTTTGCC 57 6568818 6568836 TCTTCAGTCCAATCCGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16756 FBgn0029765 FBtr0070776 1 1 1 94 X 5321714 5321850 CTCTCGAATTGGATTTGTTTGC 58 5321905 5321923 AACAGCCCATAGTTCCGAG 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301950,FBtr0301953,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 3 7 7 95 X 5272542 5272668 TGTCTACACAAAGGCATCG 57 5272723 5272745 GCATGGTAAGCTACTATAAGTCC 58 NA Drosophila melanogaster 61 SIP3 FBgn0061196 FBtr0070727 3 1 1 60 X 4854882 4854902 ATCGAGTACCAGATGATGAGG 58 4854842 4854862 CATGGCAGTATTTCCATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHOp24 FBgn0029709 FBtr0070675 1 1 1 111 X 4435570 4435943 CAGGAGTACATGCATGTGC 59 4436018 4436036 CTGTCATCAGGACCAGGAC 59 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 3 3 3 172 X 3770263 3770353 GGGTCAGCAGAAGAAACTG 58 3770547 3770568 ACATGGTGAAGATATGGAAGAC 58 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487,FBtr0070591 1 3 3 61 X 3372652 3372670 GTGGATACCAATTGTGGCG 59 3372548 3372566 GATCCGAGTCTTCCACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp3A FBgn0040334 FBtr0070445 3 1 1 89 X 2512906 2512924 TAATTCGGGCTACCAGGAC 58 2512728 2512747 CAACAACTGTATGGCACTCC 59 NA DesignNoJunction Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 CG32808 FBgn0052808 FBtr0070295 3 1 1 155 X 1363271 1363290 TTTGAGCAAGTTTGTCCAGC 59 1363073 1363091 GTATCGCTGAACACTTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CR40528 FBgn0085741 FBtr0114191 1 1 1 62 U 9894631 9894649 CTGTTCTACGACAGAGGGT 58 9894675 9894693 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42407 FBgn0259838 FBtr0300135 3 1 1 279 U 5759239 5759258 TCCTCACCAAAGAATATCGG 57 5758979 5758999 GAATGAGAGCTTGAAATGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98P FBgn0067407 FBtr0085225 1 1 1 129 3R 23670874 23670892 CGCTACTTTGAGTATGGCA 57 23671098 23671119 GCTCAGAAATGTTCAGTTTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 3 3 3 80 3R 27398867 27398982 GTTTGCATGCTGATACGCA 59 27399026 27399044 CAAGGGTGAATCGGAAAGC 59 NA Drosophila melanogaster 61 Jon99Fii FBgn0039777 FBtr0085690 3 1 1 101 3R 26313003 26313021 TTTGCATCAACACCAACGG 59 26312920 26312938 CGAAGGAGGTTACTCCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 2 2 2 97 3R 25873356 25873437 ACGCATTCAGGTATGTGGT 59 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 CG5107 FBgn0039342 FBtr0084879 2 1 1 80 3R 21330937 21330955 AAATGAAAGCCATCACCGT 58 21330999 21331077 ATTCTATTGCATTGGCCCG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Trf4-2 FBgn0039251 FBtr0084718 3 1 1 60 3R 20751839 20751858 TTCAACGAGGTCTACAACTC 57 20751881 20751899 TGATCACCATTAGCGTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp68 FBgn0001230 FBtr0084589 1 1 1 60 3R 19881834 19881852 CAAGAGCCAGATCCATGAC 58 19881792 19881811 CTGAACCTTGGGAATACGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10300 FBgn0039107 FBtr0084445 3 1 1 103 3R 19538179 19538266 GCCTTTCAAGTTCGTGGTC 59 19538333 19538351 CTGCCTGATAGCCATTGGT 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 2 9 9 105 3R 16799060 16799236 TCAAGAATGGACCTACCGC 59 16799304 16799323 CTTGCAGATGATCAGATCGG 58 NA Drosophila melanogaster 61 CG4362 FBgn0038784 FBtr0083900 3 1 1 82 3R 16132291 16132309 TCTTACCTGCTCTCACTGC 59 16132160 16132179 CTCCGTTTCCGGAATTATCG 58 NA DesignNoJunction Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123,FBtr0083795 2 2 2 159 3R 15626211 15653383 TGAATTCACAATTCTCCAGCG 59 15623207 15623226 CTGAAGACCCATGTTCTCGT 59 NA Drosophila melanogaster 61 CG14303 FBgn0038633 FBtr0083659 1 1 1 80 3R 14472102 14472229 TTCCCGACGGTTATGTTCTC 59 14472268 14472290 GGAGGACAAATAATTGATCCCAG 59 NA Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083607,FBtr0083606 1 2 2 122 3R 14067614 14067694 CACCTCGATTGTCTTCCCA 59 14067510 14067528 AGTTGGAGACTCTTGTGGC 59 NA Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 3 2 2 108 3R 12030246 12030624 CAACTACAAATATGAGAACGGC 57 12030159 12030179 TCCCTTCTTCAAGTATTCCAG 57 NA Drosophila melanogaster 61 CG3505 FBgn0038250 FBtr0082966 3 1 1 95 3R 10483465 10483483 TGCTATCCGGCAATCTCAG 59 10483540 10483997 TACTAGGACAGCATACCTGGA 59 NA Drosophila melanogaster 61 CG33109 FBgn0053109 FBtr0082900 2 1 1 60 3R 10047159 10047178 GATCCAGAAAGGCTAAACGA 57 10047118 10047136 TTTGCAGGTCGTTAGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Bbb FBgn0051354 FBtr0082636 2 1 1 93 3R 8329026 8329044 AATCTCAAGGATGAGCGCA 59 8329101 8329119 CGAACAGAGATCCCTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5270 FBgn0037897 FBtr0082387 3 1 1 80 3R 7254516 7254535 GTTCTTGGACAAGTGTGAGC 59 7254575 7254657 TCTAGTCGAATCTGCTTCAGAG 59 NA Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 1 2 2 80 3R 5998356 5998375 CTCTTCCTGATCATGTTGCT 57 5998142 5998315 CTCGATGATCTCTGTATTGGC 58 NA Drosophila melanogaster 61 bel FBgn0000171 FBtr0081888 1 1 1 81 3R 4484103 4485696 CTAGAGCAGCAAGTTGCTG 58 4484040 4484058 TAGTGGAAGTCTTGCTGGT 58 NA Drosophila melanogaster 61 Cyp313b1 FBgn0037601 FBtr0081893 2 1 1 81 3R 4470117 4470201 TTATAGAACAGCTTCTCGAACC 58 4470057 4470075 ATCTCCATTTCGGATCGCT 59 NA Drosophila melanogaster 61 CG14463 FBgn0037535 FBtr0081783 1 1 1 118 3R 3826126 3826144 ACTCCAAATGGAGACGGTG 59 3826223 3826326 GCATGTACTTTACGTCCAAGTC 59 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081637,FBtr0081636,FBtr0081635 3 3 3 60 3R 2902727 2902745 CAATATCTTCTCGGAGCCC 57 2902769 2902787 CTGTTGGTTGTACTTGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0112922 1 1 2 80 3R 1919997 1920015 CAGTGTTCAAGATTGGCGA 58 1915402 1919953 CATAGTAATCCTCGCACCC 57 NA Drosophila melanogaster 61 elm FBgn0037358 FBtr0078732 1 1 1 60 3R 1480380 1480398 AAATCCAGGAGGAGACTGG 58 1479437 1479455 GTGAAGCGCGAGTAAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1115 FBgn0037299 FBtr0078777 3 1 1 87 3R 1052619 1052637 CCATCCAGACCGTACTGAG 59 1052688 1053051 AGGATTCTGCTGCAGACTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14453 FBgn0037179 FBtr0078519 1 1 1 63 3L 22687294 22687312 CTCCTCGGATAGTACCAGC 58 22687339 22687357 AGTTGTGTCGGAGGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33768 FBgn0053768 FBtr0091769 2 1 1 97 3L 22640292 22640311 AATATTCGTATCGCAGGCAG 58 22640429 22640447 CAGACGTCACGTTTAGGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG33768 FBgn0053768 FBtr0091769 1 1 1 96 3L 22640292 22640311 AATATTCGTATCGCAGGCAG 58 22640428 22640446 AGACGTCACGTTTAGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14570 FBgn0037122 FBtr0078457 1 1 1 60 3L 21723443 21723463 AATTGAAGGCAGTCATCTGAG 58 21723403 21723423 CTGTCTTTGCAGAAACCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3618 FBgn0037028 FBtr0078271 3 1 1 60 3L 20809016 20809037 TAGATGTCAAAGCGTGTTTGAG 59 20808879 20808898 CAATAATTCGGAGTGCAGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5932 FBgn0036996 FBtr0078196 3 1 1 67 3L 20454603 20454736 TTAATGCCAATGCGAGCTC 59 20454766 20454785 CTGGTTGCTAGAGGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7430 FBgn0036762 FBtr0075140 1 1 1 87 3L 17842041 17842059 CATTAACGAGGCTGTGCTG 59 17842110 17842191 CTCGGAACATGTTGGATGC 59 NA Drosophila melanogaster 61 frc FBgn0042641 FBtr0299820 2 1 2 61 3L 17423153 17423229 TGAATCCAAGACGTCATGAC 58 17423111 17423129 TAGAGCATCCTCTCCAGTC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13724 FBgn0036707 FBtr0075214 2 1 1 60 3L 17316890 17316909 CGCACGATTATCCATATCCT 57 17316931 17316950 AATGCTGTGGGTATAGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TMS1 FBgn0028399 FBtr0075389 2 1 1 81 3L 16408041 16408124 TGACCAACTGGTACAAACCT 59 16408168 16408186 CTGGAGACGATCTTGACCC 59 NA Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 1 2 2 86 3L 16372426 16372444 TGCACTACTTGGTCACCTC 59 16372298 16372378 TGAGGCTATAGAATCCTCCCA 59 NA Drosophila melanogaster 61 CG4925 FBgn0036614 FBtr0075428 1 1 1 80 3L 16343983 16344002 AATGGGTCACTTGGAATCCA 59 16343863 16343940 CGTTCTACAACCGCTTTGG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0112850,FBtr0301472 2 3 7 80 3L 16070898 16073865 GAAGAGCTCAAGCAACTCG 59 16073907 16073927 AATTACTCTAATCAACGCGGC 59 NA Drosophila melanogaster 61 Arf72A FBgn0000115 FBtr0075517 3 1 1 136 3L 15976570 15976588 CTCTACAGACTGCAGGTGG 59 15976683 15976974 CGCCAATAAGGTCTAATACTTGTC 59 NA Drosophila melanogaster 61 CG13449 FBgn0036520 FBtr0075590 2 1 1 91 3L 15604639 15604658 GTTTCCTTACCGATGAAGCT 58 15604506 15604588 AGCTCTATTGAGATATCGACCA 58 NA Drosophila melanogaster 61 CG33262 FBgn0053262 FBtr0302393 1 1 1 80 3L 13129433 13129454 CATCTCAAGATGTACACTCCAG 58 13129495 13129570 CAGCAATAAACTGGTGCCT 58 NA Drosophila melanogaster 61 CG11262 FBgn0036329 FBtr0075872 1 1 1 60 3L 12988361 12988379 GCACCAATCTAGCATTCCC 58 12988403 12988421 CAAGTAGTTCGGTTCAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-G FBgn0036228 FBtr0076066 1 1 1 60 3L 11946338 11946360 GTACTTCAAGAAAGTACTCTGGC 59 11946245 11946263 ATAAGGACGTCTTGAACGC 58 NA DesignNoJunction Drosophila melanogaster 61 Sod FBgn0003462 FBtr0076229 3 1 1 259 3L 11105944 11106687 TCTTCGAACAGGAGAGCAG 59 11105703 11105721 CGTAATCTTGGAGTCGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 2 2 2 139 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087227 11087300 GCAAAGTGTTCAACCTCCT 58 NA Drosophila melanogaster 61 dpr6 FBgn0040823 FBtr0076353 1 1 1 167 3L 9997189 10026289 ATTGTGATGAGCGACATGAC 58 10026419 10026437 GAAGTAGGGCTCCATCCAC 59 NA Drosophila melanogaster 61 CG34382 FBgn0085411 FBtr0112620 3 1 1 96 3L 9875636 9875654 CCCTATCAACTGCCATTGC 59 9875714 9875793 GAATCACTTGGTAGGGCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG14177 FBgn0036013 FBtr0076378 2 1 1 60 3L 9591216 9591234 AGTGCTTACGATTTGGCCT 59 9591258 9591276 TCGGATATAGCCATTCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32351 FBgn0052351 FBtr0076639 1 1 1 84 3L 8614289 8614364 GGTTACCGGTCAATATTCGTG 59 8614410 8614428 TTCACCATGTCTCCAGGAC 59 NA Drosophila melanogaster 61 CG7550 FBgn0035839 FBtr0076736 1 1 1 60 3L 8117149 8117167 CGAGGAACCCAAATTGGTC 58 8117107 8117128 TCTCTTTCTAGGAGTCAATGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exex FBgn0041156 FBtr0076751 3 1 1 99 3L 7943440 7943458 AGGAGGACATCCCTACCAG 59 7943519 7943674 ATTATGACCCATGGGTATCGG 59 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 2 2 2 97 3L 7774094 7774115 GAAGTTCTTCTTAAACTGAGCC 57 7773960 7774036 CTTAAGTAGTGGGCCTTGG 57 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 1 2 2 82 3L 7774079 7774100 CTGAGCCATTATCAAAGTTCTC 57 7773960 7774036 CTTAAGTAGTGGGCCTTGG 57 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851,FBtr0089849,FBtr0089850 2 3 3 92 3L 7628898 7628984 ATAGCCATGAAACACTTGGC 59 7629037 7629057 GGACTTTAGATTATTGGCGCT 58 NA Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597,FBtr0072598 2 2 2 173 3L 828022 828040 GAGCTCGTATTATCCGGTC 57 827688 827885 TTGCTGGCATCTTAGAAGG 57 NA InUTR Drosophila melanogaster 61 snoRNA:Me18S-G393 FBgn0086030 FBtr0114306 1 1 1 79 2R 20516232 20516250 TAATGTGGCTCCCTTTCCT 58 20516171 20516190 AACACTTATGATGTCCTGCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33386 FBgn0053386 FBtr0086378 1 1 1 60 2R 15641526 15641544 ATACATCGGTTCTCGTCCG 59 15641484 15641502 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3770 FBgn0035085 FBtr0072393 2 1 1 81 2R 20833847 20833921 GTAGCATAGGAGTTTCATTCTACTG 59 20833958 20833978 TCTGCCTTTAGGCTTATACCG 59 NA Drosophila melanogaster 61 CG32834 FBgn0052834 FBtr0071991 2 1 1 89 2R 18871032 18871050 GTTGGATTGCCGAGAACAC 59 18870863 18870980 GGTACTGGGTACGGTAAGTG 59 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 3 2 2 81 2R 18703125 18703200 ACCATCACATTCAGATATCTCC 57 18703241 18703260 TTTGCTACTCAGTTCGTCTG 58 NA Drosophila melanogaster 61 Obp59a FBgn0034766 FBtr0071870 2 1 1 138 2R 18590571 18590673 AGGAGATGAATATGGTGGATGG 59 18590772 18590790 CTCTCCAGATAGCGGAAGC 59 NA Drosophila melanogaster 61 gom FBgn0029084 FBtr0071766 1 1 1 91 2R 18028019 18028037 AGAACAGCCGCTATAACCT 58 18028092 18028159 TAGACAGAGGACACCTGAC 57 NA Drosophila melanogaster 61 CG10306 FBgn0034654 FBtr0071670 2 1 1 61 2R 17572951 17573036 GCTACAACCCAGATCATCTG 58 17573059 17573078 GTTGTTCTTAGCCTGATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 pirk FBgn0034647 FBtr0071682 1 1 1 60 2R 17549274 17549292 AGACAACCATCTACGCCAG 59 17549232 17549250 TTCTCAATGCGGTACTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112645 3 1 2 80 2R 16987557 16987727 GATCACAACTATAGGTTACGGC 58 16987768 16987786 CCGATGATGGCATAGACGA 59 NA Drosophila melanogaster 61 CG15227 FBgn0034554 FBtr0071514 3 1 1 60 2R 16754213 16754232 AGCCAGGATCATCGATTGAG 59 16754253 16754273 CCGAATGGTTGAAGTAGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13436 FBgn0034532 FBtr0086229 1 1 1 80 2R 16525006 16525083 CGGAGCTTATATTTCCGCA 57 16525126 16525145 ACTCAACAATGTGGTTCAGG 58 NA Drosophila melanogaster 61 CG9864 FBgn0034490 FBtr0086320 2 1 1 95 2R 16136032 16136052 TGTACGGCATCATTAACTGTG 58 16135892 16135976 ACTGATCGATTGTGTTCTCG 58 NA Drosophila melanogaster 61 CG11208 FBgn0034488 FBtr0086322 2 1 1 86 2R 16130605 16130687 TTACCCAAATCACACCACCA 59 16130538 16130556 AGAAGTAGCCCTTCATGCC 59 NA Drosophila melanogaster 61 CG9416 FBgn0034438 FBtr0086555 2 1 1 80 2R 15256385 15256469 CACTAAAGAGCATGGTTTACCC 59 15256326 15256347 GTGATAATGGTCAAGATCAGGC 59 NA Drosophila melanogaster 61 CG5482 FBgn0034368 FBtr0086661 1 1 1 80 2R 14518061 14518141 AAGGAAGAATATTGGAGGGCA 59 14518001 14518019 TTTCGGGTTCGAGAGTAGC 59 NA Drosophila melanogaster 61 CG30114 FBgn0050114 FBtr0086753 3 1 1 69 2R 14095519 14095537 TAATATTCGCAACCGCTGC 59 14095569 14095588 AATCAGCAGACTGTCCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5721 FBgn0034315 FBtr0086771 3 1 1 103 2R 14071387 14071407 AAGAGACCATCAAGCAATTCG 59 14071249 14071267 CGTTTCGTTGATGACAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 proPO-A1 FBgn0261362 FBtr0302291 1 1 1 80 2R 13776210 13776306 GATACGTTGAAGATTCTTCTGGC 59 13776152 13776170 CCTCAATCATGTTGCCCAG 58 NA Drosophila melanogaster 61 CG34194 FBgn0085223 FBtr0112387 2 1 1 87 2R 13432117 13432337 TCTTCCTCAATGTCCTCCTC 58 13432387 13432405 AAGACGGTGACACAATAGC 57 NA Drosophila melanogaster 61 CG9010 FBgn0034173 FBtr0087067 3 1 1 60 2R 12846656 12846675 TCAGTTGGTACGATAACGAG 57 12846615 12846636 GCATAGAGAACTAGGTCAAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051 1 1 2 80 2R 12843175 12843255 GCTGTGAGACCTAGAAATCTG 58 12843296 12843315 GTACCAGGAGGACGATAAGG 59 NA InUTR Drosophila melanogaster 61 CG34189 FBgn0085218 FBtr0112382 2 1 1 60 2R 12642021 12642041 TTCAATTCCCTCTGCTTTCTG 58 12642062 12642081 CAGTTGTCATGACCGAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vha14 FBgn0010426 FBtr0087341 3 1 1 62 2R 11567291 11567309 TTAAGCGGGACGATATCGA 58 11567247 11567265 CATGACGAATAAGCTCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 2 1 1 87 2R 11181047 11182510 GACCATCATCAACTATTCCGC 59 11180980 11180998 CTGGACATGGTTCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30480 FBgn0050480 FBtr0087478 2 1 1 60 2R 10564561 10564581 ATATAGATGCCGATTCTCCCT 58 10564521 10564539 ATGGACTCATCAGTAGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 3 2 2 80 2R 8447315 8447401 GAGTGTACTATTCCGAGAACGA 59 8447442 8447460 GCAACTCGGTAAGAACTGC 59 NA Drosophila melanogaster 61 Cpr49Ag FBgn0033730 FBtr0087922 1 1 1 126 2R 8295524 8295625 CTTCAACAGCAGCTATGAGAC 59 8295713 8295731 TACAAGCTCCTCGTGTTCG 59 NA Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088331 1 1 2 98 2R 6029335 6029353 GTCCTTCTCATGATGCAGC 58 6029413 6029494 GTTGACGATAGAACCAAAGGC 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562,FBtr0088561 2 3 3 80 2R 4967861 4967881 TTATGTACTGCTGCATCTGTG 58 4967920 4967994 CACTCATAGTTGGTTATGTCGT 58 NA Drosophila melanogaster 61 Dmn FBgn0021825 FBtr0088641 3 1 1 184 2R 4779484 4779588 TACCGGGAATAGCTTATGACC 59 4779734 4779752 ATCCGTGAAGTCCACACTC 59 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 1 2 2 80 2R 4285170 4285189 AACTCCATCTTCCTCACCTG 59 4284851 4285128 TACTCCATAGCGTTTGAGGG 59 NA Drosophila melanogaster 61 CG1602 FBgn0033186 FBtr0088960 1 1 1 80 2R 3405876 3405952 ACCCACATACAAGTTTCATCC 58 3405816 3405835 GGGTGTTCCTTGTAGATCTC 57 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089744,FBtr0089743 3 3 3 120 2R 3389126 3389144 ACTGGAGAAGTCACGTGTG 59 3389226 3389311 GAATTTGTCCTGGTGATCCAG 59 NA Drosophila melanogaster 61 CG14471 FBgn0033049 FBtr0085970 2 1 1 60 2R 1885597 1885617 AACACCTATATCCTGATGCCC 59 1885638 1885657 TCACTACACCTGCTTGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31703 FBgn0051703 FBtr0085946 3 1 1 81 2L 22102919 22102986 ATACCACGGGATTGGTTCC 59 22102856 22102877 TAGCCTTTCATTATCTCGTCCC 59 NA Nonspecific Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 2 2 2 80 2L 21660049 21660127 TGCACCAATTGTACATCTACC 58 21660167 21660187 GATTACCGTAGAACGATTCCG 58 NA Drosophila melanogaster 61 His3:CG33848 FBgn0053848 FBtr0091852 1 1 1 60 2L 21510299 21510317 CGCTCAGGACTTTAAGACG 58 21510341 21510359 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33901 FBgn0053901 FBtr0091905 1 1 1 60 2L 21453934 21453952 CGTAATTCGTGATGCCGTG 59 21453892 21453911 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG31611 FBgn0051611 FBtr0085926 1 1 1 60 2L 21424737 21424755 CGTAATTCGTGATGCCGTG 59 21424695 21424714 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9318 FBgn0032880 FBtr0081393 2 1 1 82 2L 20733974 20733992 CTTCTATCTGCCCGGACTG 59 20733001 20733930 ACAACAAGATTTCCGACTTGC 59 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 2 2 2 135 2L 20660381 20660462 GTTCTTCGATGTGGACACC 58 20660264 20660282 CAAATCCGGCGTATAGGTG 58 NA Drosophila melanogaster 61 CG31683 FBgn0051683 FBtr0081365 1 1 1 81 2L 20448395 20448413 CTTCGATCCACCGAATGTG 58 20448267 20448353 CGATTTCTTGTACTGCAGTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG12617 FBgn0040996 FBtr0081351 1 1 1 93 2L 20294780 20294890 CATCTTTGGGAGCAACATGAG 59 20294945 20294963 ATAGTTCCGACCCATGGAC 58 NA InUTR Drosophila melanogaster 61 CG41073 FBgn0259997 FBtr0100266 3 1 1 84 2L 20231626 20231758 GCTGGATTTAGCGTAGTCC 58 20231560 20231578 TTTCTCGGCATTCCTTTGG 58 NA Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081264 1 1 3 89 2L 19581889 19582014 CCAAACAACTATCTCGCTATCTC 59 19581822 19581840 GAAAGCGTGGTGAAAGTGG 59 NA Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 3 1 1 81 2L 17531621 17531711 ATATAGGGAATCCTCGGCG 58 17531558 17531577 GAACAGTTCTAGGGTACGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17329 FBgn0028896 FBtr0080827 3 1 1 60 2L 16291464 16291483 GCATCTGAATACTCAGCGTC 59 16291506 16291524 ATACTGCAGCATCTTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42680 FBgn0261566 FBtr0302802 2 1 1 60 2L 14588088 14588107 TTTGGTAATGTCCCACAGTG 58 14588047 14588066 TTGGATAGCTACCTCCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 2 2 2 80 2L 13829396 13829414 CCGAGACATACACCTTTGG 58 13829265 13829352 ATAAGGCAATCTGGGTTCG 57 NA Drosophila melanogaster 61 CG33645 FBgn0053645 FBtr0091622 1 1 1 192 2L 13533028 13533046 GATATTACCGTGCATGCCG 59 13533257 13533275 TCTGTGGTGGAGTTAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG16848 FBgn0032522 FBtr0080501 3 1 1 60 2L 13412849 13412867 GAGCGGTTTACGTGAAGTC 59 13412889 13412909 CAATCATCCACGAACTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220,FBtr0080497 2 3 3 83 2L 13382774 13382901 ACCGCGATTCAAACATACAC 59 13382947 13382965 GAGCCGTGGAAATTCTCCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6108 FBgn0032498 FBtr0080459 1 1 1 60 2L 13279487 13279508 ATACAACTCAGAACCTTCTCAG 57 13279528 13279547 GTTATCCTCATCCTGTTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6746 FBgn0032394 FBtr0080313 1 1 1 60 2L 12001998 12002020 GGTCAACTACTACATATTGCAGG 59 12001960 12001978 ATACTCCCACAACGTCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 2 2 2 80 2L 10999568 10999587 AGGCCATAATGATCATTCCC 57 10999440 10999525 CCCTCAACGTCCTAAAGTC 57 NA Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 2 2 2 82 2L 10440043 10440064 GCCCTTCATAGATGTTACTCCA 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG9515 FBgn0032077 FBtr0079791 3 1 1 80 2L 8942553 8942573 GACGTATACTTTGGCGATCTG 59 8942437 8942512 AGCACCAGCTTTATCTAGGG 59 NA Nonspecific Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 1 3 3 80 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929038 8929057 AGTTGCCTTAGGTTTCTCGA 59 NA Drosophila melanogaster 61 CG32988 FBgn0052988 FBtr0079736 3 1 1 60 2L 8865458 8865479 CAATGATATGCGGTATCTCCTG 58 8865498 8865518 CATGAATGCGATCAGGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9289 FBgn0032058 FBtr0079751 3 1 1 92 2L 8682025 8682112 GGCTGATCGATCTTTGCAG 59 8681951 8681970 GGTAAGTGCTATTGGGAAGC 58 NA Drosophila melanogaster 61 CG9287 FBgn0032057 FBtr0079753 1 1 1 81 2L 8677654 8677675 GACCCACGATTTCTTTAATCGT 59 8677448 8677612 GCCAGCAACATCGATTAGC 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 2 4 4 120 2L 8536961 8536979 CATACAACCGACATCGGTG 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Acp29AB FBgn0015583 FBtr0079716 2 1 1 60 2L 8393156 8393177 TATGGAACCTTTGGGATCTCAG 59 8393117 8393135 AATGTAGCCTTTCCGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7627 FBgn0032026 FBtr0079608 1 1 1 80 2L 8360510 8360957 GCACAAATCTGAGACTCTGG 58 8360449 8360468 AAATTGGGCTTTCCTTTGGT 58 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079538 2 1 4 63 2L 8030983 8031001 TATAGACTCGCAGAGCGAG 58 8031028 8032070 TACGCTATATCCTGCACCG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Spn28D FBgn0031973 FBtr0079549 3 1 1 110 2L 8006514 8006532 ATGAGATCCAATCGACGGG 59 8005551 8006440 GATCACCCGTCTGTAGTCG 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331,FBtr0079492 2 3 3 82 2L 7806708 7806729 AAAGATAGTTCACTACACCTCC 57 7806514 7806668 GGTAGATTATTGCATACGAACC 57 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079377,FBtr0079376 3 2 3 108 2L 6802649 6802720 TTGACCAAATAGACGCTCG 58 6802496 6802514 AAGTGGTGTACATGATGCC 57 NA InUTR Drosophila melanogaster 61 CG12511 FBgn0031729 FBtr0079113 2 1 1 61 2L 5678957 5678976 TGCTCAAGACATTCTCACAG 58 5679000 5679018 TTCTCTGACCTCTAGCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31952 FBgn0051952 FBtr0077591 2 1 1 74 2L 3417263 3417281 AATTGCTGTCAGGGATTCG 58 3417319 3417337 ACTTTGTCCTTAGCTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr22b FBgn0045500 FBtr0100188 1 1 1 83 2L 1792310 1792328 ACGAAACCGCGATAATCCT 59 1792194 1792264 AAGCGAACTCGTTAACACTC 58 NA Drosophila melanogaster 61 CG31937 FBgn0031360 FBtr0077884 1 1 1 60 2L 1730197 1730215 AAATTGGTGCTAAGTGCCC 59 1730239 1730257 CTAGGCATTCCTCTTGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 2 1 1 110 2L 1705022 1705040 GAGTTTAAGATCGGCCCTG 58 1705114 1705417 GTCCATCTGCATTTCCGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4764 FBgn0031310 FBtr0077960 3 1 1 60 2L 1151349 1151368 TACGTGTACCAACTGATCGG 59 1151389 1151409 AGATCTTCTTGTACTCGATGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078,FBtr0078077 2 2 2 81 2L 555564 555582 GTATATTGAGAGCTCCGGC 57 555438 555520 TATCTTTACCTGCGAGAACC 57 NA Drosophila melanogaster 61 al FBgn0000061 FBtr0078053 3 1 1 139 2L 384812 384830 TATCGCACAACCTTCACCA 59 385738 386318 TGAAACCAAACCTGAATGCG 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050,FBtr0078049 1 5 5 80 2L 345086 345105 GGAGAACGGATGAACTTCAG 58 345148 345227 GAATTTGACGAGCCTTGGA 58 NA Drosophila melanogaster 61 CG11490 FBgn0031233 FBtr0078125 1 1 1 101 2L 207624 207721 CGGGAAACATCCTCTTCAC 58 207786 207804 ATTCCACCAAGGAAAGGGA 58 NA Drosophila melanogaster 61 CG13694 FBgn0031219 FBtr0078160 1 1 1 60 2L 116053 116071 TTGTGGAGGAATGGAGCTG 59 116011 116034 TAGTTATAGCTTCCCAAGTCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415 2 1 4 92 2L 38597 38618 CGATGGTATTATTCACCAAGCT 58 38080 38545 TCTTGAGAACTATAGGCGGT 58 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 1 2 2 115 2L 450530 450673 TAGAGGATGGCCTTACCCT 59 450433 450451 TATGTCCTCGGGATTCGTC 58 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 2 2 2 116 2L 450531 450674 GTAGAGGATGGCCTTACCC 59 450433 450451 TATGTCCTCGGGATTCGTC 58 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 2 3 5 91 2L 849927 849945 AACATGACCATCGGATCCT 58 837334 837355 GCCATCGATATGGATTTCACTC 59 NA DesignNoJunction Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 3 2 2 89 2L 1052391 1052410 CGCTCTACACAATCATGCTG 59 1052256 1052339 TCTGCAAGATCTCCAGCTC 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 3 6 6 127 2L 1500033 1500122 CCACTCAAGTCAACATATCCAG 58 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0110883 2 1 5 94 2L 1938541 1938559 ATATCGGACCTCAGTCTGG 58 1938617 1938880 GTGTCATGGGAGTCAACTG 58 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830 2 1 2 92 2L 2152101 2152119 AGAAGGCTATTGGGTCCAG 58 2152259 2152671 AGCAAAGCCCATTTGATAGAG 58 NA Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 2 2 2 70 2L 2226059 2226078 TGATTCTCATGATGCAGCAC 58 2225951 2225970 CCCATGACCCTTAATGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 1 2 4 80 2L 2490782 2490801 ACTAAACTCGTCTCACAGGG 59 2490667 2490739 CACCGGAAGATTATGTCGC 58 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 3 4 4 60 2L 2768914 2768934 AAATCAGTACTGCCTCAACGA 59 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 1 2 2 116 2L 2975184 2975204 GTTAATGAAGACACATGCTCC 57 2975017 2975036 CCGTTGTCATGTCATTTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 2 3 3 164 2L 3870399 3870417 CAACAACCTGAACTGCCAG 59 3870542 3870630 CCGAGTTGTTCGATATACTCCT 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290079 1 1 9 134 2L 3879753 3879773 AGAAATTAGCCTACGCATCCA 59 3879055 3879657 ATTAGCATTTGACGCTGGC 59 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 3 5 6 92 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307621 4307640 TGATGTAGCACTGAACAACG 58 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 3 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 2 3 3 80 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533811 AGTCTGGGTGTTACTATGGT 57 NA Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 1 2 2 83 2L 6072603 6072621 ATAGATTCCGCGCTATGGG 59 6072666 6072743 CTGTTGTGAGGTAAAGATGGG 58 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079250 1 1 2 94 2L 6342342 6342737 TCCATACAACCCACCACAG 59 6342795 6342813 TAGAAGACGACCAGACTGC 58 NA Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 2 1 1 89 2L 6745191 6745215 GAGGCCATTATCAATGAATATGAGG 59 6745071 6745091 CTGATTGATTTCCAACAGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336 3 1 2 99 2L 6774876 6775838 ATATCGAACAAGCTGACCCT 58 6775967 6775988 TGGTATAATCAATGCTCTCGTC 58 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378 2 1 3 103 2L 6802029 6802047 GTACCCATGTAAGTCCGGT 58 6801894 6801962 GATGCTGTGACGTTCTACG 58 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 1 4 4 84 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079512 1 1 5 95 2L 7697533 7698732 CAACACTGAATTCCCAATTGC 58 7697458 7697479 TGATTAGGATGTGAAGCTATCG 57 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 2 3 6 85 2L 8284180 8284199 ATTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 2 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 3 2 4 94 2L 8428060 8430291 AAATTGAGGTGGATCTCGC 57 8430349 8430367 TTATTCGCATGTAACGGGC 58 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 3 4 4 120 2L 8536961 8536979 CATACAACCGACATCGGTG 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0079691 1 1 3 98 2L 8663100 8663118 GACAACTTCGGAACACTGC 59 8663241 8665454 GTTTACAGCCTTCTTGACGC 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 1 4 5 86 2L 9272530 9272551 CGCATTAAAGAAGCAAATCGAG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 2 2 3 90 2L 9553927 9554008 TTTCTGATGAACCTCAAGATGC 59 9553858 9553876 TGGTGGATCTTATGCTGCC 59 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 1 2 2 86 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571744 9571850 TGATTATCCCTGTTGCGGT 59 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079843 1 1 2 171 2L 9643297 9643403 TAAAGTGATGCAGACCCTGG 59 9643531 9643555 GGTCTCTAGAAGATTGATAATCTGC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079912,FBtr0079915 3 2 6 80 2L 9815903 9825308 TGGTTAAATTTGGAGTGGAACG 59 9815844 9815864 CGTGATTCGTAGATCCTTGAC 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 1 3 9 81 2L 9905922 9905940 ACGTACCTGGCAATCAGAC 59 9905068 9905880 AGACTGTAGTTTAGCTTGGGAG 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 1 3 3 84 2L 10324301 10324388 ATATTCCAGGCTTTGCCAG 57 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 3 4 4 76 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965843 10965861 GCTAAATCGCTAACGCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 2 2 2 94 2L 11369000 11369736 GATTTATGGGTCTGCATCCG 58 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 5 6 103 2L 11835160 11835179 CTCGAATATGTCGTTCACCG 58 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 1 2 2 80 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053025 12053045 GTTGACCAGAACATAGATGCT 58 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0300567 1 4 5 140 2L 12299269 12299287 TGACCGTCCAGAATCTAGC 58 12299391 12304460 GATTCGGATCGGACCAGAG 59 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0080594,FBtr0300594 1 2 3 89 2L 14076835 14076853 AAGATCGACATCACGTGGT 59 14076905 14077131 TAAATCCAGCTGGAATCCGT 59 NA Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080702 2 1 2 80 2L 15093613 15093631 CGATCCCTGAGATACCACC 59 15093672 15094143 GTAGCTTGTCGCTCATATTCAG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300935 1 1 9 92 2L 15259278 15261725 TGGAAATTAACACAGGCAACAG 59 15259207 15259225 GTAGATCCGACTCGGTCTG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 3 3 9 112 2L 15261796 15261815 AAATCTACGACGAATCCTCG 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 3 2 2 80 2L 15906996 15908082 CGAAATCGATGTCGAGACTG 58 15906935 15906955 AATTTGCCCGATATTGAGGTG 59 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080918 1 1 4 81 2L 16817451 16820121 AGCCAAACAAGACCATCAC 58 16820166 16820184 TTCTTGGTCGGTTGTTCTG 58 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 1 2 2 80 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488500 AGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 1 5 6 80 2L 19511728 19511805 ATTTATGATGGAGGCTACCG 57 19511667 19511685 GTTAGTGGAGAGTTCGCAG 58 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 1 5 7 114 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569163 19569185 GGTTTCTCTACATAGGTATGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17472 FBgn0032868 FBtr0081382 2 1 1 60 2L 20634582 20634602 CTTAGTATTGGCGAATCTGGG 58 20634692 20634713 CCTTTCGTGTTCATCATATTCC 57 NA DesignNoJunction Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 3 2 2 130 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781807 20781825 GGTACTTATCCTTGGTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 2 5 5 80 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617419 21617498 ATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0301000 2 1 4 152 2L 21719623 21719642 AGCAGCATTATGGAAGACGA 59 21720471 21725094 TTTAAAGCGCTGGAGATTGC 59 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 2 3 3 80 2L 22365255 22365276 CAGTTATACTCGAGATTCCTCC 57 22365314 22365387 AATGGGACATCCTTTAGAAGTC 57 NA Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 1 3 3 148 2L 22427789 22428360 CGTGCTGATGATCTTGAGG 58 22427659 22427677 TTAGTCTTCCGTTGCTCGT 59 NA Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 1 2 2 60 2L 22690631 22690649 ATCTTGTGCTATCAGCACG 58 22690589 22690607 AAGAACTCCCAATGCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bft FBgn0041606 FBtr0080320 1 1 2 80 2L 11960347 11960408 GAGTGTGATTACGCCTCCA 59 11960285 11960306 CATCGATGGCATTAGATAGCAG 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 3 5 5 80 2R 19469 19547 TGTGTAATCACTTCAGTTGAGG 58 19585 19606 TAAATCAAGGAGATCGTACTGC 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 3 3 4 97 2R 1414858 1414876 GGACATCCTAATGGCTACG 57 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 1 5 5 70 2R 1491749 1491767 TCAAGTTCGCTCCCTAGAG 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 1 11 11 88 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 1 2 2 84 2R 2886624 2886642 TTCGTAGTGGCCTTCTTCG 59 2886754 2886772 GAATCAGCATGCAGATGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111079 2 1 59 80 2R 3236477 3245737 CCAGTACCCATTAACAGATGG 58 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476 2 1 8 128 2R 3357328 3357348 CCTGCTACATTGACAAATCTG 57 3357009 3357238 TCGTAGTTACCTCCTTGGA 57 NA Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 2 1 1 60 2R 3561779 3561799 ATAACAAAGATCTGCTTGGCC 59 3561677 3561695 TAAGAGCAATGCTTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0088830 3 1 2 112 2R 3677995 3678073 ACTTGAGGGAATTATCCTACG 57 3678147 3678165 AGTTGCATTGGGAGTATGG 57 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883 2 1 2 88 2R 3819348 3819424 CCATCTAACAGTAGCAATTTACCAG 60 3819284 3819302 TGACGTGGGATCTTGTTCC 59 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883 3 1 2 103 2R 3819348 3819424 CCATCTAACAGTAGCAATTTACCAG 60 3819269 3819287 GAGACCTGAGAGGCATGAC 59 NA Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 3 2 2 120 2R 3850890 3850966 GGAATATAGACCACGCGGT 59 3851049 3851068 GTAGGGATCAATCGGAGGTC 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325,FBtr0273327 2 2 4 112 2R 4376853 4380733 TATCAAAGGGTCCATCAGCA 58 4376760 4376779 GTATGGATGTGACCGAGGAG 59 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787 2 1 2 80 2R 4468412 4468542 TGCAAGGGAATAACAACCG 58 4468350 4468370 CATCCATGGGATAACCAAGTC 58 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 3 2 2 108 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957125 4961589 AGATATCGTTGAGTCGCTGAG 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 2 2 3 147 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967850 4967871 GCAGTACATAAATCGAGATCCT 57 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 1 3 3 115 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 2 4 5 111 2R 5423495 5423513 AGAGTTGGAGAAGGTCAGG 58 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 3 2 2 223 2R 5703110 5703128 TATTTGCGCAGGATCAACG 59 5703367 5703385 CTGATGTACTGGAAGCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088420 1 1 3 99 2R 5997536 5997554 AAACACCTCCGATTAGGCA 59 5997663 5997745 GTATTTCCTGAAATATCTCGAGGAC 59 NA Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 3 2 2 60 2R 6044693 6044711 AAGTTTAGCGAGCTACGCA 59 6044651 6044669 ACTCCAGACTTTCCCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273274,FBtr0088362 1 2 4 62 2R 6137327 6138396 ATCATCGTTCTGGTGTCCG 59 6137283 6137301 CTTGTTTCCTCCACCACTG 58 NA DesignRelaxed Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088363 1 2 4 147 2R 6138087 6138397 CATCATCGTTCTGGTGTCG 58 6137958 6137978 CGTACACAAACGTGTTAAACG 58 NA InUTR Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 1 2 26 94 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6393564 6419549 GCGTAATACTCAGATCTTGGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 1 2 2 80 2R 7294481 7294501 AAGCCCTTGGATTATTTCCTC 58 7294543 7294621 CTTGGGCAGACTGATTAGC 58 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0113074 2 1 6 122 2R 8337709 8337727 CCATTTCGCACATGGTCAG 59 8338097 8338433 CGATGTGTCGGAATTCCAG 58 NA Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 3 1 1 61 2R 8433560 8433581 TCTTGTCCTTACAACGTAAGTG 58 8433655 8433676 GTCAAGACAAAGTCCTTTACCA 58 NA DesignNoJunction Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 2 2 2 81 2R 9037179 9037266 AGTTCGCAGAATTACAATCACG 59 9037119 9037140 GGAGAGGTGTTTGTTCAATGTC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 1 5 12 80 2R 9310224 9326126 GTCTCCTGAATACCTATGACGA 59 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 3 3 8 105 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065445 10065463 CAACTTTAGGTTGGGTGCT 58 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 2 3 4 84 2R 10661506 10662485 ATTCCACGTCAAGGGTCAG 59 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087413 3 1 2 87 2R 10927478 10927497 CAGAACAAATCTCAGAGCGA 58 10927547 10927652 GAACATCCGCCTTGTAGAC 58 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 2 3 3 80 2R 11204639 11204718 CAAAGTGGGATAGGCTCAC 57 11204762 11204780 CGTATTCCTGAGTTTGCCA 57 NA Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 2 2 2 80 2R 11407473 11407493 GCAATAATCTGAGCAACGAGG 59 11407357 11407433 AGTTAACGCGATCGAAATCTG 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 2 3 7 92 2R 11545902 11546128 CCTCACAAGCCATGTATCC 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 1 5 7 80 2R 11555162 11555180 AGCTGATTCTACCCATTGC 57 11553477 11555118 GCAGATAGGCATCGAACTC 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 1 4 7 161 2R 11669313 11669331 TATTGCGGAAACACTCTCG 58 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302795,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 2 5 13 89 2R 11848682 11848827 CCAATTCGAGACACATATTCTC 57 11848614 11848632 GATCCATTGGATTTCGGGA 57 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 2 3 3 60 2R 12306463 12306536 CAAGTGCAATAAGGCCTTGG 59 12306422 12306440 TCCATGGATACACAAACGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 3 3 5 82 2R 12442915 12442934 CATCAGTCGCAGTTGTAGTC 58 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 1 3 5 148 2R 12562740 12565923 GAAATCAGTACTGGATGCTCAG 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0087048 3 2 3 90 2R 12818704 12818722 TTTGCTCCTATGTGGTGCA 59 12818776 12819979 TTTGGTGAGTCCGAATCGA 59 NA Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 1 1 1 103 2R 12893929 12893947 GACCAGTTGAATCTGCTCC 58 12894295 12894313 TCATTAGTGCCTTCCACGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 2 2 2 80 2R 13378859 13378937 CCGGATGCTATATCCTTGGG 59 13378980 13378998 AAAGGTGACCTCGTTGAGG 59 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900 3 1 2 92 2R 13474891 13475045 CGATGCAGGAATCTATCATGAC 59 13474820 13474839 TCAGATTTAGCTGCTTGTCG 58 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840 2 1 3 102 2R 13574429 13574766 AATCCTCACCGAAAGGGAG 59 13574832 13574850 TGGATGGAAGTAGAGCACC 58 NA Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 1 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 3 2 2 90 2R 13668853 13668871 ATTCACACCTGACGGTCAG 59 13668720 13668738 AGTTGATCGATGAGGGCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 1 3 6 80 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169010 14169145 ATGTAATACCGTCTCAGCTCC 59 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 3 1 2 248 2R 14419950 14419973 CGGTAGATGTAGGTAGAGTATCTG 59 14420377 14420396 CAGAGGAATGATGGTTCCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 1 2 4 104 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528689 14528973 AATCTTGTATCAGCACCCAG 57 NA Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689 2 1 2 167 2R 14548099 14548177 ATCGATAAACCAGCAACGG 58 14547950 14547969 TGAATTGAACGATTCCACGT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086506 1 1 4 110 2R 15124469 15124487 AAAGGTGGCTAGGAAGAGC 59 15124561 15124843 TGTCGCATCAACTTCTCCT 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 2 7 10 80 2R 15296095 15297142 CCCAAGAAGATTACAAAGTGGG 59 15296036 15296058 AAACTGGAGTGGATCTTCTATCC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 3 5 19 97 2R 15361384 15361402 ACAAGTGGCATCATTCCAC 58 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 1 3 3 80 2R 15554183 15554201 TCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 3 1 2 70 2R 15671499 15671519 GCTACATTCGCATTGACTCTG 59 15671384 15671403 CTGTCTATGTTGGCTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 2 3 3 80 2R 16217662 16217744 ACCTGAAGGACTATATCAAGTGG 59 16217781 16217802 AGTACTCATAGTAGCGTTCCTG 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 1 2 8 111 2R 17187801 17187819 CTCCAACCAGAGTCCTTCC 59 17187891 17191401 GCGATTTATGTTATAGCCAGGA 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071851 2 1 4 178 2R 18195750 18198597 TAGTGTACTATCTGGCCAGAG 58 18188394 18188412 AACCACAATGAGGAACAGG 57 NA InUTR Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0112820 2 2 3 70 2R 18430847 18430871 GACATATCTCATCCTAAAGGATCAG 58 18428449 18428467 GATAAGATCGCTCCGACTC 57 NA DesignNoJunction Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 3 8 8 102 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611606 18611625 AATGACACGTTGATCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 3 8 13 141 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814812 18814832 CGTGAATGTTTCTATGCAGGT 59 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 1 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111 2 1 2 182 2R 19310077 19313372 ACAAACGAGATAATCATCACCG 59 19309753 19309771 GTACAGCACCATGTTCTGC 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 4 5 115 2R 19455915 19484433 GGTCAACAAACAGTATTCGG 57 19484508 19484591 GTGTCATTTCCGTCTTTATGTC 57 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089503 1 1 3 232 2R 19595996 19596161 CAGTAAGCAAGCAACGAGC 59 19596355 19596375 GAACATGGACTTGATCTTGCT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 2 2 4 117 2R 19833770 19833965 AATACCAAACGCCAATCGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 1 2 4 116 2R 19833770 19833964 AATACCAAACGCCAATCGA 57 19834124 19834142 CGCTAGCGGTAGATATACG 57 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 1 4 4 80 2R 19941161 19941181 TCTATTCAACCCAAAGGATCG 57 19940975 19941061 GCAAACCCTTCTTTAATCAAGC 58 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 3 2 2 97 2R 20008261 20008279 TGCATCAACGAATCGTTGG 59 20008340 20008428 GACAACCGAGTGTTCTCCT 59 NA InUTR Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 3 3 6 123 2R 20281909 20281928 GTTAAGCCAGGACATAGTCG 58 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 2 3 6 122 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281024 20281822 CGTTGCTGTAGTTGTCTCG 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 2 3 6 80 2R 20817806 20817880 TGCACATGAAGATCCAACG 58 20817744 20817768 ACTTAAGGAGGTAGTAGAAGAACAG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 2 3 3 81 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962846 20962923 TTTATGGAACTCGTGCTTGC 59 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 3 3 3 80 3L 185059 185138 AACATCTTTCAGTACGCTGG 58 185179 185199 CACCAATTTAGGAGCTAGACC 58 NA Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072524 2 1 2 80 3L 222205 222277 TTTCCTGGAACTAATGACCG 57 222144 222162 GTATTCTCTACGCTCCCGA 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 3 5 5 86 3L 245466 245936 GAAGGAAAGGGTACGAGTC 57 245398 245419 GCATATCATCCTCATTATCGGA 57 NA Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 2 2 2 82 3L 268392 268411 AGGAGAAGTATGGGAGGAGG 59 268456 268577 ATCGACAAGACAGACCGTC 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 2 4 4 80 3L 345202 345223 CTACGTCTATTCGAATTGCACC 59 345085 345162 GCGAAGAGATCATCACAACC 59 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 3 3 3 115 3L 679820 679907 AAGAATTTAGCGACCTGGC 58 679723 679743 CGTTTCAACCATTTAGCTACC 57 NA InUTR Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604 1 1 2 92 3L 710234 710317 AGCATATTTCCCGGTTATTTGC 59 710163 710182 GAAGATTTGACTCCGCTGTG 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 2 4 6 80 3L 982228 982246 CCTGCATCTCTATGGTCTG 57 982288 983865 TCGATCATTTCCTTGATCAGG 58 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0072662 3 1 2 82 3L 1293720 1293806 GTGAACATGGGAATGTGGT 58 1293852 1293870 ATATCGGTGGTATCTCGCA 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 3 3 3 80 3L 1539121 1539208 GAATCTGTATAGATGTCTTCCTCGA 59 1539241 1539264 ACCTCGTAGAGTATGTTGTATACG 59 NA Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798 1 1 2 80 3L 1723633 1723651 AGCACGGTAGATGCATCTC 59 1718088 1723592 ATCTGCAAATTATATCGCAGGC 59 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072779 3 1 3 87 3L 1798942 1799017 CCAAACGGCACATTTAGGAC 59 1799067 1799085 CTCTATCCCACTTCCGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 2 2 4 108 3L 1881208 1881227 TATTTGCTCATCTTCACGGC 58 1878550 1881139 CATTAAAGGCCTCGAATCCTC 58 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072844 2 1 2 150 3L 1964601 1965084 TCCATCAAGGCTATTGCGT 59 1965198 1965216 TCATCTTCTCCGGAATGCC 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072963 3 1 4 91 3L 2500455 2501081 CAACGAAGACACGTATCCCT 59 2500383 2500401 AGATGATGCCGATCTTGGG 59 NA Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 2 2 2 80 3L 3039188 3039210 CAAGTTACTCCAAGAACTGACTG 59 3039247 3039336 ATGTGAAAGACCGTATAGTCCA 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115 1 1 5 103 3L 3131198 3142839 AGTGTCTTCACGAGTTCCG 59 3131113 3131131 ATTATGGGCATCGTCAGCA 59 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 3 1 1 60 3L 3471947 3471966 TTCATCCTATTTGGAGCCGT 59 3471836 3471856 AATGCTTCAGGACTATGGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0290290 2 1 2 81 3L 3613867 3614078 CTAGATGAGCTTAAAGATATCTCGC 59 3614114 3614135 TAAATGTACCTATTCCCGAGCT 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073188 2 1 5 87 3L 3723868 3742012 GGTCAAGAGGAGTTTAGAACCA 59 3723802 3723820 GTTGGGCGTGGATATTGTG 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267,FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 3 6 6 111 3L 4126918 4126996 TCTCGAGGAGATTAACAAACTC 57 4126828 4126846 GGTGGACATAAGGTTTGCA 58 NA Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 1 3 3 101 3L 4369887 4369911 GTATACACCTTCATGTGGATATCAG 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 2 3 3 149 3L 4551932 4552115 TCATATCGTTCCAAATGGCG 58 4552224 4552245 GTCTACCCAGAAGTATTTGGAC 58 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 3 3 3 95 3L 5338823 5338841 ACTTATCCGGATTGGGTGC 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 1 3 10 80 3L 5535644 5535662 ATGAGGGAACCTACACGAG 58 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 3 3 3 80 3L 5753885 5753963 AGAAATCACTTTGGACCAGGA 59 5754002 5754023 TAGCTCAGTTTGTCTATTGGGA 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 6 6 89 3L 6584024 6584042 GAATCCTCCCAAACGTGAC 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 5 6 105 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583714 ATAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 3 4 4 80 3L 6685396 6685485 CTTCGTAATAACCGGTCTTACAG 59 6685338 6685359 TATTCCGAGAAGTTTAGACCCA 58 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076951 2 1 3 111 3L 6740079 6740210 ACGATGAAGATTTCTCCCGT 59 6739987 6740005 AATCTGTAGGGCACCAGAC 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552,FBtr0299551 3 2 9 131 3L 7156964 7157356 CATAATATCTCCAAGAATCGGAGG 58 7156856 7156874 CTTAATCTTGCCCTCGTGC 59 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0076839 2 1 2 60 3L 7324282 7324303 TGATGAACCTTCTCAGATAACC 57 7324323 7324402 AACAGTCTTTACTTCGTCGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 1 12 15 93 3L 7699007 7699083 TGAACCAGAGGAGATTGCC 59 7698932 7698951 TACGACGGCAAAGTACTGAG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 1 4 15 119 3L 7654600 7655092 ATCTCATCGCAGAAACAGG 57 7654499 7654517 CATTGGTTACTACCGTCGG 58 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817 1 1 5 103 3L 7902327 7902346 CTATTTCACATATGCCGCCG 59 7900421 7902263 GCGTTGTTATGGACATCTCTG 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 1 2 2 80 3L 8301245 8301263 GTTAGCGTCATCAACACCA 58 8301056 8301201 AAGTTGAGTCACTTGCACG 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 1 3 9 95 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 1 2 2 84 3L 8397257 8397277 GCATAGAGAAGGAGATGAGGG 59 8397141 8397211 ATGTCGCTCTCCTTCAGTG 59 NA Nonspecific Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076615 2 1 2 163 3L 8420493 8422148 ACGACACTGAGGACATTGG 59 8422274 8422293 ATAGAGATCGTTCTGCACGG 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0300426 1 1 5 121 3L 8581816 8581834 TTTCTCACGTCGAAGACGA 59 8581916 8582048 GTCAAATAGGTTAGAGCCTCTC 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300208 2 1 2 85 3L 8889435 8889960 GCTTTGAATACCATGGTAACAC 58 8889371 8889389 GAGTTCCACTTCATCTGCA 57 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 3 4 7 80 3L 8904170 8904189 CCATGAACATCTGCAATGGA 58 8904060 8904130 AGAGAAGGAGTTCCATTAAACG 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0301137,FBtr0301913 2 2 5 116 3L 8927399 8927513 GTTTACCAGAAGGCTTGTAACC 59 8927214 8927232 ATCTTCCTGACGTTTGGCA 59 NA Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 3 1 1 62 3L 9207842 9207861 TGGTCAGGAATTTCCATTGG 58 9207948 9207969 CCAATAATACAGCCCGATACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 1 2 2 124 3L 9405082 9406320 GCACTATTTGCTGTACCCA 57 9406408 9406499 AAGTTGAATCTGCAGAGGG 57 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 3 5 5 81 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408555 9410758 GGCATGAATTATCTCGGCC 58 NA Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 2 1 1 110 3L 9420361 9420379 GATGCGTTGAGGTCAAGAC 58 9420515 9420533 CAGCAGACTTTAAACCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 3 2 2 298 3L 9851661 9851680 CTCATCTTACGCTACATGGT 57 9851108 9851126 TTGTCACAATGCCAACTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 3 2 2 80 3L 9887378 9887457 TTGATTTGCCCATGATCCG 58 9887316 9887334 CATTGGGATGATAGCTCCG 57 NA Nonspecific Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076358 2 1 3 122 3L 9889728 9889819 TCTACACCAAAGGCAATGGA 59 9889625 9889643 GACATACCCGACAGGTGAC 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 3 4 5 138 3L 10567559 10567579 GAAATCATCTTCAACGAACGC 58 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 3 2 2 97 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626526 10626545 GGATAAGCACATTAGCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 2 4 4 80 3L 11520328 11520347 CTGATCTCAAAGCCCTAGTG 57 11518762 11520285 CAAATAGAGCGAGGGTGTG 58 NA Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 2 2 2 81 3L 11556187 11556412 CGTCCAAGATAAAGATTAAGGACG 59 11556451 11556470 GCCAAATAGGGAGATCCTCC 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 1 3 3 91 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 3 4 4 80 3L 11993786 11993864 CAAGTTTAACCTGAGCGAGG 59 11993725 11993745 TGCTTCTTGAACTGAATTCCG 59 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 1 3 4 88 3L 11992086 11993380 TGCGTGAGATGTTCTTCGA 59 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 2 3 4 89 3L 11992087 11993381 ATGCGTGAGATGTTCTTCG 58 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076056,FBtr0076057 3 4 5 194 3L 12021962 12048295 AGATCTCCAGTCCATCCGA 59 12020252 12021805 CCATCAACATCTTTCAGCGA 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 1 3 5 133 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005708 12005727 GATTGCTCACGTTCTTCCTC 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 3 6 6 86 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208827 12208845 GTTTGTCCTTTGACCAGGA 57 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167 2 1 3 189 3L 12471220 12472820 GAAACTCAGAGTGGCTATGTG 58 12471051 12471069 GGTGTTGATTGAGCGATCG 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 2 3 4 88 3L 12558038 12558056 TAATTACCAGGAGCTGGCC 59 12534465 12538505 AGTGTAGAGCGGTATAGCC 58 NA Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 1 2 2 83 3L 14555087 14555158 AGAGACATTTGAGGAAGCGA 59 14555204 14555222 AAATTGATGCATGCCACGG 59 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 2 3 3 81 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621437 14621458 ATCGTTGTTTATCATCTGCAGG 59 NA InUTR Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0113171 2 1 2 97 3L 14985707 14987693 AACTTTGAGGGTCTTGAGCA 59 14987753 14987771 TATCCCTGAGGTCGATGCT 59 NA Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0113171 3 1 2 98 3L 14985707 14987693 AACTTTGAGGGTCTTGAGCA 59 14987754 14987772 GTATCCCTGAGGTCGATGC 59 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 1 2 4 94 3L 15301925 15304066 GATGATTGTGGGACTTTCCA 57 15304123 15304141 ATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 2 1 1 74 3L 15520846 15520864 CCTATTGGCTACGCATTCG 58 15520561 15520579 GAGGTAGCCAGGTAACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 3 1 1 74 3L 15520845 15520863 CTATTGGCTACGCATTCGA 57 15520560 15520578 AGAGGTAGCCAGGTAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 1 2 2 80 3L 16382907 16382926 ATGAATCACAGATCGAACCG 58 16382967 16383045 CTTGGTAGGACTGTCTATTGG 57 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 3 3 3 81 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 3 3 10 87 3L 16922174 16922198 CTATGAGGATGTTAACGATAGTGTG 59 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 1 2 4 91 3L 17591982 17592000 TTATCGACGATGCACTGCT 59 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 1 2 2 137 3L 18106215 18106233 GCTTACTGCAATAAGCGTG 57 18112924 18112942 AGATCAGGGTGATCCTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566 2 1 3 61 3L 18608865 18608884 GTAACTAGACTGCGCTTCTC 58 18594546 18608843 GCACTCCAATTTCTAATGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13380 FBgn0036799 FBtr0100555 3 1 1 60 3L 18609834 18609852 CCCAGATTTGTGATCTGCA 57 18609511 18609530 AATGGACAATTGCGAAAGTC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 3 1 1 61 3L 18599384 18599402 CAACAGCTGTAGCCAAACG 59 18599491 18599512 AATGGTCTCATTAGTCAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 3 4 4 81 3L 19635043 19635061 GTTTGCAAACCTGCATCCA 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 2 3 3 60 3L 19716991 19717012 ATAAAGGGTTATTCTGGCAACG 59 19716891 19716973 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301607 1 1 5 92 3L 19792718 19794557 ACTGTGAGACCTTCATAGCA 58 19794611 19794630 GCAGAGATCTCCAAATGGAG 58 NA Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 3 2 2 149 3L 20021395 20021413 TAAGATTGTACTCGCAGCG 57 20021150 20021224 AGAGCTTCATTTGAGCAGTG 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 2 2 5 124 3L 20146360 20146378 CCAAGATGGGCATTATCGG 58 20145396 20146274 AGTATTGTTAGTGTGGCTGTG 58 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 2 3 3 80 3L 20426897 20426918 GGTGTTCATTAAATACCTGCCT 58 20426958 20427049 AGGACAGCAATAAGATCCCA 58 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 3 3 5 94 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505478 20505632 GATCACTGGTAGCTTTCCCT 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 1 4 4 177 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200638 TCAACTGATTCTCCAGATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 1 2 2 91 3L 22672790 22672870 ATAAGCAGCTGGAGGACAG 59 22672925 22672943 GATGGTCTGGGTGATGACC 59 NA Nonspecific Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0113191 2 1 3 84 3R 96066 103175 AAATAGTTGCTTGCACGGC 59 96000 96019 TTAACAAGGAATTGCTGCCC 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0078903 3 1 2 80 3R 134142 134352 AAGTGCTTATTTGCTGTGC 57 134396 134414 TGGTCTGAGTAGGTTGAGG 58 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 3 3 4 107 3R 151087 151105 TCTGACCAGATCAATCCGG 58 151175 151429 ATTTCTCAAGGGTACGGAGG 59 NA Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 3 2 2 81 3R 190216 190296 CGTTATATCATGCTTTGAGTCC 57 190337 190356 CAGCTCCGTATTGAAATGGA 58 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078866 1 1 4 152 3R 535932 535950 TGGCAACAACATCTACCAG 57 536066 536347 CAGCCCAGATCTAATTCGT 57 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299709 3 1 3 80 3R 1008598 1011101 CTCTACGAAAGATATCGAGCG 58 1008538 1008557 GAACATGGTTAGCTTGTGGG 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 3 3 3 122 3R 1314883 1314902 GAAACCAAGGACTTGGTGTC 59 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 3 2 2 83 3R 1369008 1369097 CCAGATACGGGCTTTATTGG 58 1368944 1368964 CGTACCTAGGAATCCTTTCAC 58 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 2 2 2 81 3R 1395125 1395144 AATCGTCGCTATGCATACAG 58 1395187 1395309 ATCTTGGTGAAGGTGTTCTC 57 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078733 1 1 3 83 3R 1469939 1469957 CTGAAGAAGACCTGGCTCC 59 1469489 1469892 ATCCAGGGCAGCTATTGAG 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600 3 1 2 115 3R 2091005 2091025 GCCAAGTAACAAACTATTGGC 58 2091102 2091998 CAAACACAAAGCAGTCCAC 57 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 3 4 4 91 3R 2184950 2184968 TGTCCTCAGCATTTCAGGA 58 2185021 2185112 GAAGGGATGCTTTAGCAAGTC 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 3 2 2 99 3R 2198947 2199033 GTGGAATTTGACCAAGAACTCC 59 2198869 2198887 AATGGTCTTCTGGACGGTG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 3 4 11 88 3R 2735065 2735083 GATCAAATGTCCGGTCACC 58 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 2 1 1 110 3R 2905012 2905033 GACTTTGGTCCGATAAAGAAGG 59 2904689 2904707 TTTAATGGCCTTCAAGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612 1 2 9 80 3R 2947050 2947068 TGCGATTTGGGAATGTGAC 58 2946852 2947009 TATAGCAAGTCTTCGAGTACCG 59 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 1 2 2 88 3R 2972718 2972742 GGCCTTGGATATACAATATCAACTC 59 2972593 2972673 TTTGCGGATTCATCTTCGAG 58 NA Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 2 1 1 93 3R 3638248 3638267 GAATTCGGAATGCTAAGCGG 59 3638538 3638556 CGTGACCAACTCTTGTACC 58 NA DesignNoJunction Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 2 3 3 105 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723662 ATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0081908 1 2 4 60 3R 4547247 4547265 ACTCAAGCCATCTCCATGG 59 4547351 4547371 TAGACATTGAACGTCCAAACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0081908 3 2 4 61 3R 4547247 4547265 ACTCAAGCCATCTCCATGG 59 4547351 4547372 CTAGACATTGAACGTCCAAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089784 1 1 8 91 3R 4656717 4657871 AACATGAGCGAAATGGAGC 58 4656644 4656662 ATATGATGCCCTTGGGACG 59 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 1 3 5 124 3R 5057888 5057906 TATGTCTACATGGGTGGCC 58 5044472 5057800 GTGGATGTGGTAATCGCTG 58 NA Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 1 2 2 125 3R 5228660 5228678 AACATTCTCCAACGCATGG 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 1 2 14 81 3R 5262774 5262792 CAGGATCCTCAGAAGCTGG 59 5262835 5269747 AACAAACTGACTCACAGAAGC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 2 2 14 96 3R 5260134 5269741 GCTTTGTTCGAGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 3 2 2 77 3R 5826675 5826696 CATAATGAACAACGTTATGGCC 58 5826561 5826579 TCACTGGTCCACTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 1 2 6 104 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930640 5930658 ATTTGCAATGCTCTCCACG 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 1 2 8 84 3R 5955358 5960548 GCCAGCAAGTAATGGAGAG 58 5955292 5955310 TATGATGTCTGCATCCGTG 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090033 3 1 4 154 3R 6120030 6122463 CATACAACCAGCTTCACCG 58 6122581 6122599 GGATTCGCGGCTTAATGTC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 3 7 8 89 3R 6428521 6428542 ACGAGGATATTGCAATGTTCAG 59 6417172 6419281 CTTGCACCATCAGTGAGTC 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 3 1 4 83 3R 6597891 6597909 TCCTATCTGAAGAGGCTGC 58 6597686 6597844 GGAGAAGGTGGTAAAGGGT 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 3 3 7 110 3R 6689535 6692258 CATACCAGAACGTATACGCAC 59 6689445 6689463 GAATTGATGCAGTAGCGCT 58 NA Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 1 2 2 124 3R 7041511 7041529 AAGCTGTACAAGGAAGTGC 58 7041337 7041423 TTGATCAGACCCTTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 3 2 2 105 3R 7059034 7059132 GAGAATCGCATTAAAGTGATGC 58 7058950 7058968 ACTGCTTCAGAGTGCTCTC 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 1 2 6 80 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628404 7629450 GACCATACATATAGTAGAACGCC 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 3 2 3 122 3R 7777491 7777509 CGAACGAAGAGATTGCAGC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 1 5 15 147 3R 7815047 7817812 AGTCCTCAGATAACTCCAGC 58 7814509 7814937 ATGGTGTCCACATTGAACG 58 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 3 3 3 92 3R 9157365 9157631 TTGTTATGCTCAGGAATGCC 58 9157292 9157310 AACGCTCTCCAATATGCAG 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283,FBtr0301351 3 2 2 192 3R 10030137 10030431 TTGGCATCTTCCTATCGGT 58 10017581 10029983 ATCCAATATCCCAGCAAATCG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 2 2 6 192 3R 11025424 11026417 GAGGATGAGTTACTGCGCA 59 11026570 11026591 TGTTATTGAGATGATTGCGCTG 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 1 2 6 184 3R 11025424 11026417 GAGGATGAGTTACTGCGCA 59 11026565 11026583 AGATGATTGCGCTGTTTCC 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 2 2 6 192 3R 11025424 11026417 GAGGATGAGTTACTGCGCA 59 11026570 11026591 TGTTATTGAGATGATTGCGCTG 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 1 2 3 84 3R 11084154 11084239 CATTGGCGTTTGATTGGCT 59 11084088 11084107 TCTACTTCTTTGCCACCTGG 59 NA Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 1 2 2 92 3R 11092082 11092163 GTGCCCTTAAGTCTTTCCTG 58 11092218 11092236 CAATGGAAACGATCAGGCC 59 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 1 2 2 145 3R 11143153 11143227 TCGAGTGGATTACCTGGAG 58 11143336 11143354 GGCTGTTGATGTAGTAGCA 57 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 3 2 2 153 3R 11189028 11189107 ATGCTACAGGCGAAATCCA 59 11188893 11188911 ATCCTGGAAGTGAACTGGG 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 3 4 4 97 3R 11217378 11217396 CATGTTCGACTACGACCCA 59 11217454 11218025 CACCAAATACCTTGATCGTGTC 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 4 5 195 3R 11723421 11723505 GAGCTAAGTGGAAATGCTCG 59 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 3 3 3 81 3R 11740155 11740174 TGGATAAACTGACCAACGAG 57 11737878 11740113 GCAGATATTTCCTCTTTGTGC 57 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 2 2 2 95 3R 11865261 11865348 GGAGCATGATCTCAAACCCT 59 11865406 11865424 AAGGTGCTACTACTGCTGG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 2 2 9 80 3R 12121527 12122391 GATAGCTATACAATTACTCCACCG 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 1 2 2 80 3R 12306994 12307015 CAATTTAATCGTGGCAGTTTGC 59 12307054 12307124 TTCAGCTCAGATTTAATGCGC 59 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 2 4 4 80 3R 12474342 12474428 GGTAGACATTAAACGCTATGC 57 12474470 12474488 ATCACGCCCTTAAGAACAC 57 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351 2 1 6 103 3R 12551014 12558455 CTATCGCAGGTAAGATAAGATCTG 58 12536291 12536309 GTCTGGTAGAAGTGAGCCC 59 NA Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 1 2 2 80 3R 13555397 13555892 CACCGTGGACATTATACGA 57 13555934 13555954 AGAATATTATGAGGTGGCAGG 57 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0083765 2 1 8 102 3R 15308360 15310766 TTGCAATTGTCGTGAGTCG 59 15310832 15310850 TTTGAGTCATCCACCGGAG 59 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 1 4 4 80 3R 15444448 15444530 CATGAACACAGAGCTTAACTG 57 15444388 15444407 ACGGAGCCAATAAAGAACAG 58 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 2 2 2 103 3R 15725672 15725690 AGGTGGACCTTACGTTCAC 59 15725522 15725608 CAGTTGTTCCATTATAGAGCGC 59 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083842 1 1 2 89 3R 15846069 15846087 TACTCTGCTTGTCCAACGG 59 15845469 15846019 CGAAGTTGCTTTCGTTTAATGC 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 1 1 2 85 3R 16406032 16406119 CGTTCAAGCGATATGATGGC 59 16406167 16406185 CAGGCACATGTAGGTCTCC 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 2 3 3 82 3R 16562578 16562596 CCAAGTTCCCTAGATGGGA 58 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 1 2 2 80 3R 16751814 16751897 ACAATGTGGAGATCCATAAGGT 59 16751934 16751956 AGTCCTCCTTGTACATGATAACC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 3 4 9 114 3R 16792914 16798905 GTGAACTCAAGGTTGATTTCGA 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089515 2 1 9 86 3R 16796691 16798904 GAACCGCAGGTTGATTTCG 59 16798953 16798972 GCCATGATGACGAAGTACAC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0300191 2 1 9 87 3R 16792327 16792536 ACTGACATGATTCCTGCCA 59 16792587 16792605 TATCGATCTCCGGATTGCG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 3 3 16 94 3R 17010983 17011004 CTTGATGTGCAATCCTTACCAG 59 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 2 3 3 94 3R 17109863 17109881 TGATGTGCAAGTTTGTGCC 59 17106316 17109805 GATGGCAATGAACCTGTCC 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 3 2 3 169 3R 17105829 17105847 CAGGAGGAGTTCGAGATCC 59 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 3 2 3 169 3R 17105829 17105847 CAGGAGGAGTTCGAGATCC 59 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084073 2 1 22 80 3R 17198798 17200795 CACAGAGGCTCAAGATACG 57 17198736 17198755 TAGATGTAGTTGCGGAACAC 57 NA Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 2 2 2 135 3R 17844428 17844509 GGGCTACGGATAACTACGG 59 17843784 17843803 AAGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515 1 1 2 80 3R 18239936 18239954 ACAACGGCTACAGATCTCC 59 18239997 18243847 GGGAGGCATCATATTGTCCA 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302187 3 1 5 192 3R 18431113 18431131 CAAGATGCTGGCTGATCAG 58 18431286 18432562 GACATCGAACCATCTGTTCG 59 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 3 3 3 80 3R 18539679 18539697 ATCACATTGGATGGAGAGC 57 18539554 18539635 TACCTCGAGGATCGTATCC 57 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 2 4 4 80 3R 18614228 18614310 ATAGTTTCTATGCGGATCCCAG 59 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0084631,FBtr0084630 2 2 4 166 3R 20173307 20173396 CTACAATCAAGCTCTCAAACG 57 20173161 20173180 CATAAGAGGACTGCGAAGAC 58 NA Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 3 2 2 81 3R 20378683 20378702 AAGAAAGACGAGAACCTGGG 59 20380118 20380196 AGGTGAGCCAACTATCCAC 59 NA Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 2 2 2 80 3R 20749880 20749899 AGAGTCCTATTGAGGTTGCC 59 20749942 20750012 GCCGGTTATTGACATTGGT 58 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 2 5 5 61 3R 21451885 21452079 CCAACCTGCTCAAGAAGTG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 2 5 5 61 3R 21451885 21452079 CCAACCTGCTCAAGAAGTG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 1 2 7 113 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535134 21535152 TTCTCATCCGATCCGTCAC 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 3 4 5 132 3R 21870339 21871200 GATCATTGGGCAACAGATCC 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 2 5 5 80 3R 22809871 22809890 CCCAGTATGCCTATGGAAGG 59 22809931 22810009 ACTTAAAGATTTGGCTCTCGC 59 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 3 2 2 83 3R 22938385 22938403 AAATAGTGATGCGGTCACC 57 22938590 22938608 TCCTTGGACTGCTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 3 4 4 196 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463958 23463977 CATTTCGAGGTGACGTTCTC 59 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0085261 1 1 2 101 3R 23795149 23795167 ATCTGCTATCAGAGCTTGC 57 23794902 23795085 GGACATTGTGACGTTAATGC 57 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299743,FBtr0299751 2 2 13 80 3R 24736890 24745223 CTTCATCGAGACAGCAAAGC 59 24745266 24745284 TGATGGAGAATGTCTCCGG 58 NA Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 2 1 1 76 3R 24858163 24858183 CCTGTCTTATATCCTAGCACC 57 24858047 24858065 AGCGTTCCATTCAGATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 2 3 4 80 3R 25327202 25327436 TTGGACCATCAGACTAATCCA 58 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 2 4 6 80 3R 25723359 25727915 AAGGAAATGAACGGACTGC 58 25727958 25727977 GAACTCTTGGATCGATTCGT 57 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 2 5 5 81 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871275 25871293 GGGCATCAGATACTGTCCC 59 NA Drosophila melanogaster 61 CG7950 FBgn0260468 FBtr0085564 1 1 2 82 3R 25882743 25882847 CTGGACGTGAAGATATAATTCACG 59 25882888 25882906 AAGAATACGGGCGTCAGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 1 2 3 135 3R 26134963 26183984 AAGTCAAGATTGAGGACGAGG 59 26184080 26184099 TAGCGATCGAATACGAGCAG 59 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 2 3 3 77 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215048 26215434 TTACAAATGGAGTTGGCCG 58 NA DesignRelaxed Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 3 10 12 116 3R 26398690 26398708 ACCTGGTGGAGAAGAACTC 58 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 2 6 12 139 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397642 26397662 CAGTATGGTTATCTCCTCGGG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 8 13 153 3R 26420665 26420683 GATTGTAGCTCGCAATCCG 59 26419562 26420549 AGTAGAGTTTCTGGTCGGTG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 3 2 13 82 3R 26421341 26421453 TCCAAACGCAGATTAGGCA 59 26421277 26421295 ATGACAATGTCCGAGGTGG 59 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 3 1 1 72 3R 26517442 26517460 AAATCATGCTCGCTCTGGA 59 26517585 26517603 TGCTGGAACAAACTTCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085717 3 1 2 131 3R 26704771 26704869 CCCTATATTTGTGAAGTGTGC 57 26704660 26704678 CTTCACCATGTTGTTCAGC 57 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201 3 1 2 110 3R 26925991 26926074 CCCTACAGAATGATCTTCATGG 58 26925902 26925921 GAGACTCTGTACAAACGCAG 58 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 1 3 3 80 3R 27400375 27400394 AGCTACCCTACAACGATCTG 59 27400435 27400531 CAAAGGTGGCTATGGAATTGG 59 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 3 2 3 83 3R 27637149 27637169 CAATATCCACAGTACAGCTGC 59 27637031 27637104 CGAGGGCAGATTATTGCTC 58 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 2 2 3 80 3R 27663680 27663703 TCATCTGTATCAATCAGTAGTGGG 59 27663741 27665612 AATTGATAGGGCTGTTGCAC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 2 8 8 167 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 3 7 7 109 4 471122 471820 ATCGTGATCTTAAGCCGGA 58 471891 471911 AGCCATAATTCCAGAATCCTC 57 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 2 6 7 82 4 470583 470875 AAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 2 4 6 108 4 640794 640889 TGCTCAACAGATATCCAGGT 58 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 3 4 6 109 4 640793 640889 ATGCTCAACAGATATCCAGGT 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091631 2 2 3 81 4 1265749 1265771 GATCTGATGGAGTCTTCAATAGC 58 1265812 1266148 CAGCGTTAATCCCTTTGCT 58 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 3 2 3 81 X 31080 31099 CCATATTACGCACCATTTCG 57 31143 32455 GCCGAAACTAAGTTCTTGC 57 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 1 3 3 80 X 528198 528219 AGTTGCTAATCATACAAGCCTG 58 528071 528160 TGGTCACGTCTATCCTAAAGAG 59 NA InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 1 2 8 83 X 550806 551138 TAACCTGCAAGAGAAAGCC 57 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070240 2 1 3 80 X 1189959 1190397 TGCGATTGTACTCTACAGTC 57 1189898 1189918 CTGCAATATCTCTGTGTTTGC 58 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0300429 3 1 9 95 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1548442 1548460 AGAGCTGGCATGAGAAGAG 59 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089814 1 1 2 185 X 1575670 1575688 TTCCTCAAAGAAGAGCCCG 59 1574133 1575442 CCAGTTAAACTTGTCGGGC 59 NA Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 2 2 2 94 X 1758267 1758287 AGGAATATTCAAGCAACAGCG 59 1758131 1758217 GGTTTAGTAAATATGCTGAAGTCCC 60 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070509 1 1 12 83 X 3140154 3140172 ATCACTCATCCGCAACCTC 59 3140216 3140336 AAGAGGTACCGGCAATATACTC 59 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 1 3 3 140 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770518 3770538 CGGTATCATCAGAATAGCCCA 59 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 3 2 5 84 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247640 4247988 ATCTAGCCAGATCTTGGCT 57 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 1 3 5 83 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 2 2 2 81 X 4551096 4551186 TCAAGCTGAATACCGAATTGAG 58 4551228 4551246 GAATCATCCTCCGAATCGC 58 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 2 4 4 90 X 5215913 5215931 CTAGAGCGCTCGTATCAGG 59 5215760 5215862 CATTCAGTTTGAATGCGATTCC 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 2 3 4 80 X 5214528 5214600 AAATAATGGGCTATCCGGG 57 5214466 5214485 CACCATTGTATTCGCTTTCC 57 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 3 4 4 80 X 5317036 5317157 TTAGAACACTACCAGACACCT 58 5317199 5317217 CTCATAGCACCAGATGTCG 57 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465 1 1 3 80 X 5527491 5527781 CCAAGTTTCTGGAAGCACC 59 5527429 5527447 CACTATGGGTTGTCTTGCG 58 NA Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 1 2 2 89 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492628 6492716 ACCAAACATCGTGAAGCTC 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 2 5 6 106 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 1 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 2 2 2 60 X 6964931 6964950 AATCCCTCAGATACTTCCGC 59 6965440 6965459 TCGAATTCCGGTACGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 sdt FBgn0243505 FBtr0100376 3 1 7 81 X 8085955 8085975 TGAGATACTCGAGGTCAATGG 59 8086016 8086145 TTTGATGCAGTCGTGTATGTG 59 NA Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 2 2 2 282 X 8143669 8143747 CTGAAGAAGCCGAACTGGA 59 8143405 8143423 TGTTCACGTAGATGCCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 3 1 1 268 X 8377621 8377640 GTTGCTGCGAATAAAGTTGC 59 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 3 3 3 107 X 9048444 9048463 GATTTCAAGACCGATCTGCG 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 3 2 2 116 X 9182500 9182519 GAAACGATGAGAATTGCTGC 58 9182598 9187950 TGAAGCTCTTCCCTCTTCC 58 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112753 3 1 3 83 X 9227647 9230968 TTTACAGTAAGCTATCGCCC 57 9227583 9227601 GTTCACAGTCCTGACTCTG 57 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381 1 1 2 105 X 9623896 9624345 AAACAACTATCAGTGAGCCTG 58 9624412 9624430 ACTTGGGTTTAGGGTTCGA 58 NA InUTR Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 1 2 4 82 X 9893265 9893283 TCATTGATAGCCGATCGCA 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585 1 2 4 80 X 10120043 10120556 TACTGAGTTCGGATAATGCCC 59 10120598 10120616 TCTTCCACGACGAGATCAG 58 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 2 4 4 136 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672354 10672372 GAAGAGTCCAAAGACACCG 58 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 3 2 2 150 X 10842532 10842550 AATCCAGAGTGCAGTCACC 59 10842664 10854646 CTTCGATTGTGACTTGCGG 59 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 3 2 2 117 X 10943061 10943080 ACTTACTGCCACAGATGTCC 59 10943160 10943233 ATGATGAGTCCTCGCAGAC 59 NA InUTR Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 2 3 4 97 X 11049247 11055098 AAAGGAGAACCTATGGTCGG 59 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 1 4 15 93 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299368 11299386 TCCCAGAATAATCACCGGG 58 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 1 2 3 80 X 11592562 11592580 CTAGTCGTTGATCCTTCGC 58 11592623 11594665 ACCCATTAACACCATTTGGT 57 NA Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 3 2 2 129 X 11885108 11885128 GTAATCGATCGACACAAGGAC 59 11884928 11885017 TCTTGTCGCCAGATGAGTG 59 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 3 2 2 95 X 11888948 11889037 CAAACCTATAAGATTGGAGCACTG 59 11888876 11888894 TTGTCCACTATCCGTGCAG 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 2 4 4 98 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910898 TACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 2 4 4 98 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910898 TACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 3 4 4 98 X 11910744 11910819 GTTAATCCCAACACTGGCA 58 11910880 11910899 GTACAGGATGTCCAAGTTGG 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 3 5 7 81 X 12090584 12090604 TACAAGCTGAAGTACGAGGAG 59 12090642 12091227 GAATATAATCCTTCTGCAGCTGAC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 2 6 7 81 X 12168211 12168229 ATTCCCGTTGCGTAATTCC 58 12168271 12170563 GCGTTTATCTATGTGAAACCTG 57 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 2 6 6 84 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545582 TATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 3 3 3 83 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604677 12604696 GCTATTGGTCATAGCTGACG 58 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 2 2 3 80 X 13170573 13176210 TACCAATACACGATCTGCCA 58 13170512 13170530 AGTCCAATGTCAGAGTGGC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451 1 1 5 155 X 13549921 13549939 AGAACATCCTGAAACCGGT 59 13550058 13552149 CCTAAATTGCTTGGGCGTG 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535 1 1 8 103 X 13664830 13665171 GCAGACATGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 3 2 2 107 X 14117987 14118071 CAGAACAATTACAGTTCGACCT 58 14118139 14118157 CTGTTGCGTCATGATGTCC 59 NA Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 1 2 2 82 X 14925029 14925047 TCTCAAGCGGATCAAGGAG 59 14925092 14925220 CGATGCGGAGATTTATTCCA 58 NA Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0112984 3 1 2 124 X 15036854 15036872 ATGTGGTACAGCGTACTGG 59 15036023 15036769 GTTCGGTTTATATGGGAGTTGC 59 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 2 3 3 98 X 15744650 15744668 TAACCTTAGGAGCACTGGG 58 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 3 2 12 82 X 15793036 15793054 TCCTGGAAAGCATCCTTCC 59 15793100 15793487 TCTTGTCCTTCCTCATCGC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074159 3 1 3 136 X 15831778 15832802 GCAATGAATTTAGTTCCATGGG 58 15831663 15831682 ATCATCTAGCTGACGATGCA 59 NA Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 1 2 2 63 X 16182294 16182312 TTTGTTTCTCGGCATGCTG 59 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 2 6 9 187 X 16270360 16270691 AACAGTGGTATCTGAATGGC 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 3 6 9 188 X 16270359 16270691 GAACAGTGGTATCTGAATGGC 59 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121,FBtr0111023 2 2 4 80 X 16380929 16383031 AGAACTACACAGATCACAAGGA 59 16380870 16380889 TGAAGCTGTGCATAAAGTCG 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 3 4 4 80 X 16649791 16649880 CTGAAAGTCAGCACTGTGG 58 16649729 16649750 ATTGGTGTTCGAGATAAAGACC 58 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074385,FBtr0290020,FBtr0074384 1 3 3 242 X 16997709 16997886 TGATGACATTTGGCGTTGC 59 16998092 16998110 ACTCCTTGACGATCTCCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477 3 1 2 93 X 17578211 17578229 CAAGAGGGTCATATCGCAC 58 17571525 17578155 GTTCACGTAGGTCTGATCTG 57 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302833 2 1 5 118 X 17635042 17640617 ATCATTCGGATACGTCCTATGAG 59 17640695 17640713 GAAGTTGGTGAAACGCGAG 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302835,FBtr0302837 1 2 5 80 X 17615640 17630243 GTGAACTAGGTGAGTACAAGTC 58 17630282 17630302 CTTCATTCAGCGATGTATCGT 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 3 2 7 80 X 18004586 18004604 AACGCGTATACAGTTTGGA 57 18000952 18004543 TGAGATCGTTGATCTCTTGG 57 NA Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 3 2 2 133 X 18201379 18201397 GCAACTGGATCGACTATCG 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 3 1 1 81 X 18553392 18553410 TGCATTCCACCAATGAGGA 59 18553514 18553532 GATTCATCGCAGCTATCCC 58 NA DesignNoJunction Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 2 4 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 1 2 2 106 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412948 TAGTGCCATCCATGACCTC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 1 5 8 82 X 21247629 21247647 TAATACGCGCCTATCTCGT 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 1 2 5 147 X 21886355 21887250 TGGGCAATAAATATGTCGAGC 58 21887359 21887377 ATCAGGGTGTCTCTGATGG 58 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 1 4 4 88 XHet 12051 12367 GATGATAACGATAATCGGAGACAC 59 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 tRNA:CR30229 FBgn0050229 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30198 FBgn0050198 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G2703b FBgn0082930 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-3 FBgn0046822 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:MeU2-A31 FBgn0086076 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:92Bb FBgn0012004 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-iab-4-5p FBgn0082170 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:MeU2-C28 FBgn0065057 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41507 FBgn0085790 FBtr0114243 1 1 1 80 YHet 313038 313058 TACGAAACTGGAACAGAAACC 58 312907 312999 AGCTCTTGATCATCCTTTACTG 58 NA Nonspecific Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 1 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 1 5 5 80 X 21228145 21228163 AGGAGAGCTACAATGTGGT 58 21228206 21228294 TGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0299591 3 2 3 80 X 21004909 21004927 ATCAAGCCGATTATCCAGG 57 21004969 21005056 GGCATTACTAAACTTCACCAC 57 NA Drosophila melanogaster 61 CG11666 FBgn0040648 FBtr0077240 1 1 1 60 X 20855775 20855795 CAGGATGTGGATAAGGATCTC 57 20855817 20855835 CATGGTTGTACTGCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 2 2 2 114 X 20539511 20540146 GCAGCAATTGTGTTTCTATGG 58 20540222 20540240 GACTGTTGTCTCTACTGCC 57 NA Drosophila melanogaster 61 CG42578 FBgn0260868 FBtr0301566 2 1 1 102 X 20317459 20317477 GCCAACTGGAAACAACGAG 59 20317543 20317561 GCTGATGTGTTCTTCCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15458 FBgn0040651 FBtr0077328 2 1 1 83 X 20285077 20285096 TTCAACGAAGCCTTCAACAG 59 20284951 20284969 GTAGACGAGTCCCAACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0004 FBgn0027334 FBtr0077298 3 1 1 80 X 20263136 20263154 CTAGCCGATAGCAAGATCC 57 20263198 20263216 GAGGATTAGGTTGCAGACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1504 FBgn0031100 FBtr0077338 3 1 1 60 X 20181814 20181832 AGATCGACTCGATCGAGGA 59 20181772 20181792 AATTTCAGGTGCTTTATGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14229 FBgn0031059 FBtr0074753 2 1 1 212 X 19588889 19588971 TGAAGACAAGAAAGCGCAG 58 19588695 19588713 GGTTGTATTCGTATCCGGC 58 NA DesignRelaxed Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082,FBtr0074784 2 2 2 92 X 19382706 19382779 GATTCAAGTCAGCATCATGGT 58 19382634 19382652 AAGGTGCTCAGATAGTCCC 58 NA Drosophila melanogaster 61 phm FBgn0004959 FBtr0074603 1 1 1 80 X 18580367 18580472 GGTGGATTTGGCATCATCTG 59 18580515 18580533 CAAGGCCTTTAGCCAATCG 59 NA Drosophila melanogaster 61 CG6481 FBgn0030936 FBtr0074620 1 1 1 60 X 18416332 18416350 CACATCCTACAATCGCTGG 58 18416290 18416309 GGTTCAGATAACGATCCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32547 FBgn0052547 FBtr0290002 3 1 1 92 X 18340187 18340206 ACCTACCTGATGTTCGTGTG 59 18340005 18340132 CTCCTGTTCATCTCTGGGC 59 NA Drosophila melanogaster 61 CG6398 FBgn0030870 FBtr0074462 3 1 1 82 X 17734952 17735032 TGATGCCAGTTTACTCGCA 59 17735076 17735096 GTAAGGTCCTGGGTAGATCTG 59 NA Drosophila melanogaster 61 OdsH FBgn0026058 FBtr0074461 3 1 1 85 X 17705864 17705883 AGGGAAGTCACTATCCTGAC 58 17705930 17707351 GAACCAAACCGCTATACGAC 59 NA Drosophila melanogaster 61 CG12990 FBgn0030859 FBtr0074479 3 1 1 95 X 17563795 17563815 GCCATCTACCTATTGAATCCG 58 17563650 17563739 AGCCAGCATTATCATCATGG 58 NA Drosophila melanogaster 61 CG12994 FBgn0040877 FBtr0074438 2 1 1 86 X 17317029 17317115 CTACTACAATGGACGCTCCT 59 17316962 17316981 ATCAGGAGCACTATGGTCAC 59 NA Drosophila melanogaster 61 CG12994 FBgn0040877 FBtr0074438 1 1 1 85 X 17317029 17317115 CTACTACAATGGACGCTCCT 59 17316963 17316981 TCAGGAGCACTATGGTCAC 58 NA Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539 1 1 2 60 X 17116191 17116209 CAGAAGAACGGAGGAGGTG 59 17116559 17116577 ATGCCATGGAACACAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32572 FBgn0052572 FBtr0074324 3 1 1 135 X 16620479 16620497 CCAGATCCACTGATCCCTG 59 16620596 16620672 AACTTGCTAGCCACTTTGG 58 NA Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 2 3 3 104 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802263 15802281 TTGCGTACTGATTTGCTCG 59 NA Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 3 2 2 80 X 15350444 15350463 CTGCTATTCTACAATGCCGT 58 15350324 15350404 CTTGGTTACGTGATCGTATAGG 58 NA Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0073920,FBtr0112982 1 2 2 68 X 14182785 14182808 GCTTCATCGATAGATATCATCCAC 59 14182586 14182607 CCGAAACAAGTAATGTGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 3 2 2 88 X 13304292 13304384 TCTGCTAAAGGTGATCTGGT 58 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG12723 FBgn0030459 FBtr0073738 3 1 1 131 X 13085129 13085147 CGTACAGCGTCAACTATCC 58 13084951 13084969 AGGTCTGCACATAAGTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4351 FBgn0030448 FBtr0073746 1 1 1 80 X 12991857 12991876 CTGTTTGTGGAACAGTACGA 58 12991734 12991816 CAGTCGGTACATGAAGATCAG 58 NA Drosophila melanogaster 61 CG15739 FBgn0030347 FBtr0073569 2 1 1 188 X 11768211 11768229 CATCAAGTTCGAGGGACTC 57 11768502 11768520 GTCAGATTGAAGTCCACGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG15741 FBgn0030338 FBtr0073606 1 1 1 60 X 11732019 11732038 ATTCCTCTGCGTACTGATCC 59 11731978 11731999 AGTAGATGAAGTTGAACTAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 X11Lbeta FBgn0052677 FBtr0071493 3 1 1 84 X 10598701 10598800 CTCGATCGGAGTCTTCCAC 59 10598847 10598866 ATTGTTGGGCTTTCGATGTG 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071468,FBtr0071467,FBtr0302373 3 3 3 60 X 10266128 10266149 AAAGAGGGAACAACCAAATCAG 59 10266089 10266108 GGAACTCACTTACTTCTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 3 3 3 85 X 9148003 9148021 CAGCAATCCAATGGTCTGC 59 9148070 9148161 AAGCCAGTGAGCAGATCAG 59 NA Drosophila melanogaster 61 CG15370 FBgn0030107 FBtr0071310 2 1 1 60 X 9120015 9120035 ACCATCATCACACTCATACTC 57 9120057 9120075 CCATAATCGTCGTCCACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7267 FBgn0030079 FBtr0071354 2 1 1 107 X 8965982 8966000 TGCTATACGAGACGGTTGG 59 8965823 8965911 TGAGCACATGACCGATCAG 59 NA Drosophila melanogaster 61 CG1885 FBgn0030066 FBtr0071268 2 1 1 63 X 8793959 8793979 AGTTTCGGCTTCAAGAATCTC 58 8793916 8793937 CGGCATATTTATCCGGATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1789 FBgn0030063 FBtr0071251 2 1 1 188 X 8615066 8615084 ACATGGAGTTGGACATGGG 59 8615357 8615378 TGTTCTTCAGCTGAATCTTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 3 1 2 130 X 8353355 8353373 CAGATGGATGCATCCAGTG 58 8353189 8353262 AATTGTGTAGCCATCCAGGA 59 NA Drosophila melanogaster 61 CG2129 FBgn0030008 FBtr0071155 2 1 1 60 X 8040092 8040111 GATGAAGAGCTTTGTGTTCG 57 8040132 8040152 GTTCTCGAAGTGAATGTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smox FBgn0025800 FBtr0071192 1 1 1 80 X 8035722 8035740 GAAGTTGAAAGAGCAGGCG 59 8034942 8035681 ACTTCTGATCTGTAACGGTACC 59 NA InUTR Drosophila melanogaster 61 CG1571 FBgn0029993 FBtr0071106 3 1 1 99 X 7971645 7971664 ACTCACATCATGACACTGGA 58 7971789 7971807 GTTTACACCGCACGATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Smg1 FBgn0052743 FBtr0070972 1 1 1 80 X 6728147 6728165 GATTCGGATGTCAAGCGAC 59 6728209 6728292 CAGCTCAGTCTTGTTGGTG 58 NA Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 3 2 2 80 X 6160488 6160507 TACAAGGACCTCATATGGCC 59 6153745 6160445 CGATATCCAGAAACGCTCC 58 NA Drosophila melanogaster 61 CG4078 FBgn0029798 FBtr0070807 1 1 1 80 X 5644997 5645103 GACTCAAATGTCTCGAGTATCG 58 5645142 5645162 CTTGTGAATCTTCACCAGACC 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 2 4 4 90 X 5215913 5215931 CTAGAGCGCTCGTATCAGG 59 5215760 5215862 CATTCAGTTTGAATGCGATTCC 59 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949,FBtr0070728,FBtr0112950,FBtr0070729,FBtr0112948 3 5 5 75 X 4823413 4823431 AGGTAGTAAGCGTCACTGG 58 4823291 4823309 CTTCTGTTTGGCCATGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 3 4 4 92 X 4619144 4619163 TCCAGCACTATGACTATCCC 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 2 3 3 130 X 4554209 4554299 CACAGATCGTGGTGATATCCA 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 CG6428 FBgn0029689 FBtr0070625 3 1 1 81 X 3861482 3861500 AATATACACCGCTGCTGGA 58 3861360 3861439 TCGTACGATTGCTGAATATCG 58 NA Drosophila melanogaster 61 CG42499 FBgn0260225 FBtr0300629 3 1 1 217 X 3688073 3688093 CAGAATGTCATTCCTGGTCAG 58 3688272 3688290 CCGTGAATCTGATTGTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3598 FBgn0025645 FBtr0070552 1 1 1 60 X 2831299 2831317 CTGTCAATTCCCAAGGGTC 58 2831341 2831359 CGACAATTTCGAAGCCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 1 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 2 3 3 103 X 2236290 2236308 GAAACACAATCGTCCCAGG 58 2236375 2236461 CCTCCGCCAGAATATTCCA 59 NA Drosophila melanogaster 61 Pgd FBgn0004654 FBtr0070384 2 1 1 95 X 2039435 2039528 GAAACATGAGCGGACAAGC 59 2039587 2039605 ACACCACGAATCCCTTCTC 59 NA InUTR Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 3 1 1 216 X 1374105 1374123 CTCCTCGACGATAACCTCG 59 1375090 1375108 TTGAATGCCGTCATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14780 FBgn0025383 FBtr0070257 1 1 1 93 X 1366765 1366783 ACAACAACTTTGGAAGCGG 59 1366838 1366917 CTCTGATTGTTGTACAGGCAG 59 NA Drosophila melanogaster 61 CG11448 FBgn0024985 FBtr0070225 1 1 1 122 X 1288078 1288098 GCTCTTTCGGATACTCAAGTG 58 1288182 1288265 GATATTGAGGTGCTCCAGC 58 NA Drosophila melanogaster 61 CG3708 FBgn0040345 FBtr0070190 2 1 1 60 X 823427 823445 GGAGAGCCTAATGGATGTG 57 823385 823406 CTGAAAGATGACCATGTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14635 FBgn0029535 FBtr0070142 2 1 1 60 X 739164 739184 TTTGGCAGATCTTTCCAAGAC 58 739206 739224 ACTGGTCGGGAATATTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0070122 2 1 2 88 X 541547 541649 GAGGTGAAGAAGTGGAACG 58 541766 541784 AAGTCCATGATGTGGTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107,FBtr0070108 3 2 2 153 X 139494 139513 TGAATCTCACGGACTTCCAC 59 139295 139313 TCTTCCAGTTTGCTTTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CR41379 FBgn0085784 FBtr0114236 2 1 1 62 U 1397572 1397590 CTGTACTGAAGAGCATGCG 58 1397528 1397546 GTGCGGACCAATAGTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42436 FBgn0259867 FBtr0300164 1 1 1 148 U 8893543 8893561 AAACAAAGCGCTTGAACTG 57 8893673 8893691 CTTGACTTCGAAATGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42417 FBgn0259848 FBtr0300145 3 1 1 87 U 6871168 6871187 CCTCCGAATATAGTCCTGGT 58 6871237 6871255 GCATCAAGGCATTCTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40375 FBgn0085733 FBtr0114182 2 1 1 82 U 1362092 1362185 CTTAGCCACATATTAACAGGAAGTC 59 1362034 1362055 CCTTTGATACGCTAGTTTCAGC 59 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 3 3 3 96 4 1150102 1150200 GTTTACAACATTCGACTTGGAG 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 2 4 4 80 4 714052 714071 TACCAACGATGAGGAGTACG 59 713454 714011 ACATGAGGTTGAATTTCCTCG 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 3 6 6 80 4 369759 369846 TATCACAGGTGCTAATCATCCA 59 369700 369719 TACACCATAGCCACTGATCC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2562 FBgn0082986 FBtr0113585 1 1 1 60 3R 16648653 16648673 GAATCTGATATCGTGGTTGGG 58 16648693 16648713 CTGGGCAAATCATTGATACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3186 FBgn0086662 FBtr0091697 3 1 1 60 3R 1423821 1423839 ACTTGTTCAACTTGCAGCT 58 1423779 1423800 CCAAGAGTCAGTATACCAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlU FBgn0037223 FBtr0113190 3 1 1 120 3R 70196 70216 TCGACCAAATGTAATCTTCGG 58 70295 70370 GCTTAGAATTAGAAAGATGCGC 58 NA Drosophila melanogaster 61 RNaseP:RNA FBgn0046696 FBtr0085775 2 1 1 60 3R 27043254 27043272 CATTTCCCAGCAGGAAACC 59 27043212 27043230 CTGGTAGCAGGATTTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 krz FBgn0040206 FBtr0085877 3 1 1 80 3R 27875581 27876998 CTTTGTGGGTGAGAACGTG 59 27875519 27875537 GGTGCGTACATGACTTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG11333 FBgn0039850 FBtr0085789 3 1 1 143 3R 27289196 27289271 CTACTAAACTGCTGGCAGC 58 27289376 27289396 GCATAGAGAACATGGTCTTGG 58 NA Drosophila melanogaster 61 CG15555 FBgn0039839 FBtr0085764 2 1 1 103 3R 27092036 27092056 ATGTATCCCATTTGGAAGGTG 58 27092121 27092202 TTGCCACTTAGATTGTGGG 57 NA Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750,FBtr0085749 2 2 2 60 3R 26789597 26789617 CGGAAGGGATCAGTATAATCG 57 26789557 26789577 CTGGTTGTAATTGTAGTTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr100A FBgn0039805 FBtr0085710 1 1 1 110 3R 26693397 26693640 TTCAGATTTCTTGCACTGACC 58 26693712 26693730 ATCTCCGGACAGATAACGC 59 NA Drosophila melanogaster 61 tll FBgn0003720 FBtr0085709 1 1 1 60 3R 26678301 26678320 GGATCAGAAATACAACAGCG 57 26678342 26678482 ATGGTATAGAATGCGACTCG 57 NA DesignRelaxed Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721 3 1 2 127 3R 26571772 26571790 ATGAGCTTCGACTTTACGC 58 26571582 26571681 ATGGTGTATGGATTGCAGG 57 NA DesignRelaxed Drosophila melanogaster 61 PH4alphaPV FBgn0051015 FBtr0085670 2 1 1 80 3R 26473667 26473685 TTCAAAGCACCTATGGCCT 59 26473544 26473626 CAGTGAGACTCACATTGTACTG 58 NA Drosophila melanogaster 61 CG9682 FBgn0039760 FBtr0085617 3 1 1 101 3R 26077254 26077272 GACATCAAGTGTCCCAGGA 59 26077393 26077494 GCTTACTGACAGATTTCTTACTGG 59 NA Drosophila melanogaster 61 sas-6 FBgn0039731 FBtr0085546 1 1 1 172 3R 25821103 25821121 GAGCGAGGATAGCTACTCC 58 25821257 25821334 TTAATCGGAGTTGCAGCAG 58 NA Drosophila melanogaster 61 yata FBgn0260990 FBtr0085477 1 1 1 80 3R 25576568 25576589 ATTCTTCCACAGCTGATAACAG 58 25576629 25576711 TTTGCCCAGCTTAAACATGG 59 NA Drosophila melanogaster 61 dmrt99B FBgn0039683 FBtr0085454 1 1 1 121 3R 25519547 25521280 GATGAGAGTCCTGTGTCCA 58 25521365 25521383 GTCAGATTGAACAGTCCGG 58 NA Drosophila melanogaster 61 Obp99a FBgn0039678 FBtr0085450 1 1 1 98 3R 25497403 25497425 GGAGGAATACATACATAGGTGGA 59 25497551 25497569 TCTTCACCACATAGTCGGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Cul-5 FBgn0039632 FBtr0085417 2 1 1 80 3R 24886017 24886094 GTCGTGGAAAGCTGAATCTC 59 24885956 24885976 GCACAATGGATTGATTGTCCT 59 NA Drosophila melanogaster 61 CG12259 FBgn0039557 FBtr0085270 3 1 1 60 3R 23746104 23746122 GAATGGGTAATGCAGCAGG 59 23746062 23746080 AGTAGCTGAACGTGATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 2 3 3 125 3R 23512757 23512777 AATGACACCCAATTTGTCGAG 59 23512282 23512672 TTGCCGAATCTTACAATCCTG 58 NA Drosophila melanogaster 61 Klp98A FBgn0004387 FBtr0085211 2 1 1 80 3R 23376426 23376613 GAACAATGAGAAGGTTCAGATCG 59 23376368 23376388 TCTCGTTTCTTAGAGTCGAGC 59 NA Drosophila melanogaster 61 DNApol-alpha73 FBgn0005696 FBtr0114543 3 1 1 60 3R 23066101 23066120 TTACGGACAGTACGGATCTC 58 23066142 23066161 TCCTTGAGGTACTTGAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 2 2 2 81 3R 22984546 22984564 GCGGAGCTATGATATCCGA 58 22984663 22984741 CGGATCTCATAAAGATCGTTCTG 59 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0085082 1 1 3 101 3R 22788170 22788894 TTCAGCTTCACTGAGGTCC 59 22788087 22788105 ATAATCGTGCGGAAAGACG 58 NA Drosophila melanogaster 61 CG18472 FBgn0039463 FBtr0085068 2 1 1 94 3R 22773825 22773843 TGAAACCGGATAGCAAGCT 59 22773901 22773979 AGTCCAATCCAGAATGGGC 59 NA Drosophila melanogaster 61 CG14246 FBgn0040608 FBtr0100441 1 1 1 89 3R 22553425 22555495 TCAAAGGGAGAGCCATGTC 59 22555548 22555566 AGAAATGCCGGTAGCTCTG 59 NA InUTR Drosophila melanogaster 61 m6 FBgn0002632 FBtr0084959 2 1 1 106 3R 21858777 21858795 TCAGCGATACGATAGCCTG 59 21858865 21858883 TCTCCAAGCAGATGACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17197 FBgn0039367 FBtr0290204 2 1 1 65 3R 21600211 21600229 ACCGTTAAGAGTCCTCTGC 59 21600086 21600182 TGAATGATGCTGAACACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG5039 FBgn0039356 FBtr0084900 3 1 1 162 3R 21504731 21504749 TGGGATTGCCTAAAGAGCA 59 21504875 21504948 CGTTATTCGCTCCATCCTG 58 NA Drosophila melanogaster 61 CG11851 FBgn0039293 FBtr0084808 2 1 1 170 3R 21048524 21048599 ATATTATTTGGCTCCTGGCAC 58 21048731 21048749 GAAAGCGCTCTTCCTTGTG 59 NA Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 3 2 2 94 3R 20890643 20890661 CCGAATAATACCTGGAGGC 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084701,FBtr0084702 2 2 2 97 3R 20665203 20665344 GCAGTGGAGCTAATCTTCAG 58 20665404 20665422 GAAATGCTTTCGCATGTGG 58 NA Drosophila melanogaster 61 CG5805 FBgn0039223 FBtr0084743 2 1 1 96 3R 20611625 20611702 CTATCAGGACGAACTGTTCC 57 20611548 20611566 TATTGTCGTTGTGAAGCCA 57 NA Drosophila melanogaster 61 CG13631 FBgn0040600 FBtr0084693 3 1 1 125 3R 20595282 20595300 CAACTACGTCTCGTACACC 57 20595389 20595407 GTACCGAACATCACCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 CG18528 FBgn0039189 FBtr0084628 1 1 1 135 3R 20185278 20185614 GAATACGAGCCAAAGGCTC 58 20185161 20185179 GAAACTCGCAGGAATCCTC 58 NA Drosophila melanogaster 61 CG6182 FBgn0039158 FBtr0084551 3 1 1 83 3R 19988338 19988358 TTAAGGACATAAGGTCCTCGA 58 19988403 19988477 CGTCAAGATCCTTTACCGT 57 NA Drosophila melanogaster 61 p38c FBgn0046322 FBtr0084582 3 1 1 60 3R 19975188 19975211 CTGATTAACATAATGGGTACTCCG 59 19975151 19975169 AACGTTCCATGCTTATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx1A FBgn0013343 FBtr0084588 2 1 1 60 3R 19929343 19929363 AGATCATGATACTGATCTGCC 57 19929303 19929321 CTGCTAACATATGAGGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tbp-1 FBgn0028684 FBtr0084452 3 1 1 166 3R 19578937 19579022 AAGATCAAGGTCAACAAGACAC 59 19579149 19579167 AGGAAATACGCCTGTCGAG 59 NA Drosophila melanogaster 61 CG10252 FBgn0039104 FBtr0084475 3 1 1 81 3R 19521636 19521655 GACAAGTTGACTCGCTATGG 58 19521514 19521592 TGCTTCGCTTATCGATGAC 58 NA Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0112485 3 1 2 135 3R 19333179 19334826 AGGATAGCCAATCAAGCCA 58 19332881 19332899 AGTGGACATCGTGAATCCC 59 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 3 3 3 116 3R 19008675 19008693 CAGACACGTTTCAGTTCGC 59 19008772 19009174 GAAGATGTCCTGCAGATAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13829 FBgn0039059 FBtr0084400 3 1 1 60 3R 18986939 18986958 ACAATGCTGAACTTGTTTCC 57 18986846 18986866 ATTCGTTCGACGAGATATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 HP1c FBgn0039019 FBtr0084309 2 1 1 60 3R 18571804 18571822 GAAGGATCCGCAAATGCTG 59 18571845 18571864 AATGTGACGGGAGTAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7045 FBgn0038978 FBtr0084258 3 1 1 60 3R 18317922 18317943 TCCTCAAATACTAACCAATGCC 58 18317964 18317982 TCATCGAGTCATCCATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13850 FBgn0038961 FBtr0084231 2 1 1 82 3R 18235356 18235442 GGGATTTGGATATCTTGGAATCAC 59 18235297 18235316 ATAGGCACTGAGATCTTGGG 59 NA Drosophila melanogaster 61 CG5379 FBgn0038956 FBtr0084235 1 1 1 147 3R 18212708 18212795 TTTAAGGTTGTTCGATCGGG 58 18212580 18212598 CCCTGTCAAGAGATCCCAG 59 NA Drosophila melanogaster 61 PSR FBgn0038948 FBtr0084239 2 1 1 60 3R 18187861 18187879 TTCACCGATAACCTGGAGC 59 18187819 18187837 GTTCGATGAACTCCGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 1 2 2 216 3R 17861730 17861811 GGATGAGGATGACGACTTAGAG 59 17861988 17862006 ATCATCTTCACTCCCGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5892 FBgn0038873 FBtr0084052 2 1 1 81 3R 17068577 17068595 ATCTTCAGTGCTATGCGGA 58 17068638 17068716 GAGTCAATCATTCTGTAGGCC 58 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258,FBtr0084014 2 2 3 67 3R 16956066 16956084 CACTGCAGCTTATCAACCA 58 16956115 16956212 TACAACTTCGCATCGGGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 TotB FBgn0038838 FBtr0083973 1 1 1 92 3R 16699715 16699794 TCTTTGATCTGTTTCGCACTG 59 16699848 16699866 TTCAGCAACCCTACGACTG 59 NA Drosophila melanogaster 61 CG15695 FBgn0038832 FBtr0083967 3 1 1 82 3R 16668746 16668816 ATAAGTACAAGCTGGGTCCT 58 16668861 16668879 GCAATAGGTGATCATGGCA 58 NA Drosophila melanogaster 61 CG16953 FBgn0038809 FBtr0300803 3 1 1 80 3R 16411005 16411138 TCTTCTGCAGACAGTTACCT 58 16410944 16410963 GACACATTGATGGTGGATCC 58 NA Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083836 2 1 2 95 3R 15885348 15885368 TCGTATATTCCATAGTCGCCT 58 15883081 15885291 GTTCGAGCGTCATGTTCTC 59 NA Drosophila melanogaster 61 Surf6 FBgn0038746 FBtr0083854 1 1 1 121 3R 15730439 15730457 CAACAAGGATCAGAAGCCG 58 15730282 15730357 TCTCCTCATCTTCTTGTTTGGA 59 NA Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634 3 1 2 83 3R 14424566 14424648 AACTTAAGGTTGCAAACTCTCG 59 14424689 14424710 AGCGCTAGAATTGTATTTGGAC 59 NA InUTR Drosophila melanogaster 61 CG14306 FBgn0038628 FBtr0113245 3 1 1 101 3R 14416863 14416881 GTTTGTGGCGTCCAATCTG 59 14416943 14417574 GGACGATGATTGTCTTCTTCAG 59 NA Drosophila melanogaster 61 CG7993 FBgn0038585 FBtr0083562 2 1 1 80 3R 14049771 14049790 GCTGGTTAAAGTGCTGAACC 59 14049830 14049919 TTCTTCATGGTCAAGAACTCCA 59 NA Drosophila melanogaster 61 CG17802 FBgn0038549 FBtr0083526 1 1 1 107 3R 13629369 13629587 GTAACTTCCACTGTGAGGTC 58 13629281 13629299 TAGCACTCATTGCGATCAG 57 NA Drosophila melanogaster 61 Hmx FBgn0085448 FBtr0273220 2 1 1 87 3R 13385844 13385862 ACTTATCACTCCGATCCCG 58 13385910 13391191 CGATATGAAACCCAATCTGGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 2 1 1 130 3R 12978105 12978123 CGATGGCTCTGCTAAAGGA 59 12978216 12978291 GTTGACTCCATTCATGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16941 FBgn0038464 FBtr0083374 3 1 1 106 3R 12827744 12827886 GCCGGAAGTTAGAAATATCGT 58 12827658 12827677 TAAACTTTGGATTGCCCAGC 59 NA Drosophila melanogaster 61 Actn3 FBgn0015008 FBtr0083380 2 1 1 81 3R 12803268 12803287 TTTGCGGAAAGTCAAGAGTC 58 12803151 12803227 GCTTAATGTACCGAGTACATCG 59 NA Drosophila melanogaster 61 CG14909 FBgn0038458 FBtr0083366 3 1 1 60 3R 12801008 12801026 GGTGTCCTACCGATACGAG 59 12801049 12801068 TACAGCCGTTAGGATCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14906 FBgn0015351 FBtr0112880 1 1 1 60 3R 12476740 12476761 ATTTAAGCTCAAGTCCGAACTG 59 12476701 12476719 CTCAATGCCTTTGTCCGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10324 FBgn0038454 FBtr0083356 2 1 1 88 3R 12471797 12471815 CAAAGAGGCGTTCAACGAG 59 12471654 12471747 CGTATTTGGCAGTGTTTATGC 58 NA Drosophila melanogaster 61 nonA-l FBgn0015520 FBtr0083335 3 1 1 60 3R 12466071 12466090 AACAGTTTGAACTCTTCGCC 59 12466112 12466131 TCTTATTGGTCGAATTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6126 FBgn0038407 FBtr0083278 3 1 1 116 3R 12025000 12025018 ACCTACCAAGCGTACTGTG 59 12024840 12024859 TAGATCACTTGGAGCCACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14877 FBgn0038380 FBtr0083249 3 1 1 81 3R 11715363 11715481 CGATTATTCCTTGGCTGCA 58 11715300 11715320 GGAACCTCCAACTGATATGAG 58 NA Drosophila melanogaster 61 CG4576 FBgn0038366 FBtr0083180 3 1 1 90 3R 11654103 11654249 CAAGTGGAAGATGATGCGT 58 11654303 11654321 GCAGATCCACTAAGCTACC 57 NA Drosophila melanogaster 61 CG9590 FBgn0038360 FBtr0083172 1 1 1 87 3R 11613472 11613549 CATAGCCAATCACTGGACG 58 11613600 11613618 GCTCTTAGCATAGGCTTGC 58 NA Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162 3 1 2 121 3R 11497895 11504868 CAATGCCGATCTTGGATGC 59 11504953 11510792 TTTCCAAACGAACAGCGAC 59 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152,FBtr0083153 1 2 2 118 3R 11366594 11367044 TGCGAAATAATGGCACACTG 59 11366495 11366513 ATTGTCGTAGACGAGGACG 59 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 1 3 3 91 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191419 11191502 CAGATTAATTTGCTCGTTGCTC 58 NA Drosophila melanogaster 61 ea FBgn0000533 FBtr0083083 1 1 1 86 3R 11155263 11155284 GATGGCTCTAATTGAATACACC 57 11155393 11155413 GTGATCACATATCTTGTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060,FBtr0083057,FBtr0083059,FBtr0083056,FBtr0083058,FBtr0083055 2 6 6 60 3R 11070946 11070965 GAGGGTACCGACTTCTACAC 59 11070988 11071006 GATCAGCGTTCAACTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7265 FBgn0038272 FBtr0083009 3 1 1 62 3R 10719447 10719465 AGCGTAGATTGGATTCGCA 59 10719350 10719369 ATAGTCGTCTGGGAATTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Cys FBgn0004629 FBtr0082980 2 1 1 123 3R 10395075 10395153 AGCTACAAGGCAATCAATGTG 59 10394972 10394990 GAGTCCAGATCTTCACGGT 58 NA Drosophila melanogaster 61 CG8087 FBgn0038241 FBtr0082983 2 1 1 75 3R 10390386 10390404 GATGCATTGACTGCACCAC 59 10390329 10390348 GTTGTACTGGTTGTATCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0112629 1 1 2 85 3R 10246554 10246573 CACTTATTGTGGATGAGCCC 58 10246621 10246708 CTCCTTGCTCATGTCTCCA 59 NA Drosophila melanogaster 61 Ipp FBgn0016672 FBtr0082865 1 1 1 110 3R 9785127 9785429 GATCCAATTGACGCTACCG 58 9785503 9785521 GTAGACGCCAATTAGCACG 59 NA Drosophila melanogaster 61 E5 FBgn0008646 FBtr0082880 3 1 1 219 3R 9699056 9699074 GTATCCATGGTTGCTCAGC 58 9693748 9694330 AACCTTAACCTGCGTTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 3 2 2 91 3R 9513947 9514078 ATATGTCAGGTGCAAGGCA 59 9514133 9514151 TCCGACATGTCCTCAAACC 59 NA Drosophila melanogaster 61 CG9269 FBgn0038161 FBtr0082794 1 1 1 60 3R 9442052 9442070 GGGCGGATATTATGGTCGT 59 9442090 9442112 GGCCGGATATCCAATATTATAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lip3 FBgn0023495 FBtr0082771 1 1 1 81 3R 9196563 9196581 CTCCTTATGCCGACATGTG 58 9196423 9196518 TCAAGGAGTTCGTAGTCCA 57 NA Drosophila melanogaster 61 CG11668 FBgn0038113 FBtr0082705 1 1 1 157 3R 8865320 8865403 CAAACCAAGTTCGCTGGAC 59 8865523 8865542 ATATTGCCGGAGTAGTCTCC 58 NA Drosophila melanogaster 61 CG8031 FBgn0038110 FBtr0082719 2 1 1 101 3R 8834856 8834933 ATGGAGGACTACAAGGATCAG 58 8834775 8834793 CAGATACGAGGACAGCAGG 59 NA Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082720 2 1 2 97 3R 8823042 8823175 TACAAGGTGCAGGACATCC 59 8822963 8822982 ATCTTTAGGTCGGTTCGGAC 59 NA Drosophila melanogaster 61 CG14391 FBgn0038078 FBtr0082663 1 1 1 60 3R 8520427 8520445 CAGTACTGGGACGTTTCGA 59 8520385 8520406 GCACGAATTTACGAATCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6234 FBgn0038071 FBtr0082648 2 1 1 80 3R 8476859 8476937 CATGAAATTAAGCTTGCGGTC 58 8476976 8476997 TTCATCGATTGTCTTTGACTCC 58 NA Drosophila melanogaster 61 lig3 FBgn0038035 FBtr0082600 1 1 1 80 3R 8224926 8225009 ACCTAGAGAAGCTTAGAACGC 59 8224866 8224886 GAGTATCGAGACAGCTTTGGA 59 NA Drosophila melanogaster 61 CG31358 FBgn0051358 FBtr0082554 3 1 1 80 3R 7857084 7857159 TGGGTCGTATTAGGAGTTGC 59 7857023 7857044 GAATGTCCACCGTATTAAACGA 58 NA Nonspecific Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 3 2 2 101 3R 7834942 7835022 TCCATGATGAGATCTCGCG 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 CG3397 FBgn0037975 FBtr0082504 3 1 1 97 3R 7809870 7809890 ATATGTTCGACTATACGGCTG 57 7809738 7809813 GTCATGAACCTGTAGTACGTC 58 NA Drosophila melanogaster 61 CG3397 FBgn0037975 FBtr0082504 1 1 1 95 3R 7809870 7809888 ATGTTCGACTATACGGCTG 57 7809738 7809812 GTCATGAACCTGTAGTACGT 57 NA Drosophila melanogaster 61 aur FBgn0000147 FBtr0082483 1 1 1 110 3R 7789113 7789195 CTATTGGGAAAGAAGCCCA 57 7789269 7789287 TATGGAATTGGAGCCTCCT 57 NA Drosophila melanogaster 61 Cad87A FBgn0037963 FBtr0082513 2 1 1 80 3R 7725212 7725761 CTTCTTGTCATACAAGGCCAC 59 7725152 7725172 GCATCAGTTACAGAAATCCGT 58 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082473 2 1 2 241 3R 7645124 7645288 GCGACAGTTATAAACGTGTC 57 7645558 7645576 AAGTACTTCTCGTAGCGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18764 FBgn0042205 FBtr0082417 1 1 1 100 3R 7453683 7453702 CAACGAATCATTCACCAGGG 59 7453765 7453856 GTGTGAGTCCTTTCGTGGA 59 NA Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 3 2 2 132 3R 7409665 7409685 GGCCTACTCGATATACAATCC 57 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100323 3 1 3 110 3R 7390245 7390263 AAGAGCATCATCACCCTGG 59 7386919 7390172 GGGAATTAGGGTGATCAGCT 59 NA Nonspecific Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196,FBtr0273197,FBtr0273195 1 3 3 83 3R 7203837 7203855 CAAGATGTACTTCCCGGAC 57 7203900 7217259 TAGAATTCTCGGAAGTTCGAG 57 NA Drosophila melanogaster 61 KP78a FBgn0026064 FBtr0301426 2 1 1 60 3R 7175366 7175384 GTTCCTGGTCCTGAATCCC 59 7175324 7175343 CCACTTATCCGACATCACAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17187 FBgn0037882 FBtr0082365 1 1 1 65 3R 7057343 7057361 AATGAGATACGCAAGGCGT 59 7057296 7057314 ATTGTCCGGATTCTTGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6621 FBgn0037855 FBtr0082329 1 1 1 83 3R 6718286 6718369 CCATAAAGGCCGTGATCCT 59 6718221 6718239 CATTCTGGACAAAGCTGCG 59 NA Drosophila melanogaster 61 CG4674 FBgn0037856 FBtr0082325 3 1 1 91 3R 6720765 6720783 TATAGCCAACTGCCATCCA 58 6720838 6720913 TCTTCGTATGAAGGTGGCA 58 NA Drosophila melanogaster 61 CG34107 FBgn0083943 FBtr0110787 3 1 1 82 3R 6050760 6050778 AAGCCTGTCGTAAGGACTG 59 6050822 6050910 TAACCTTTGAAGCTGTAGGGA 58 NA Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 1 2 3 82 3R 6049760 6049887 TGGAGCACTTTATAGAGGCA 58 6049697 6049715 GAATTCCGGGTAATGCAGC 59 NA Drosophila melanogaster 61 CG33783 FBgn0053783 FBtr0091784 1 1 1 88 3R 5892631 5892649 AATTAAAGGTCCTGGGTCG 57 5892701 5892897 TAGAATGCACGTCGAACTG 58 NA Drosophila melanogaster 61 CG3925 FBgn0037780 FBtr0082174 3 1 1 87 3R 5875389 5875475 AAGTGAAGATGATTCCGATCTG 58 5875523 5875541 CGAGACCATCATGTCTACG 57 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 2 9 9 80 3R 5845281 5845302 GTTTATTCCCGAACTCAAGGAG 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 CG34409 FBgn0085438 FBtr0112676 2 1 1 80 3R 5569378 5569461 CACTAATGGCACTTTCACAC 57 5569317 5569336 CCAATTTGTCCTATCAGCCT 57 NA Drosophila melanogaster 61 CG9396 FBgn0037714 FBtr0082111 2 1 1 81 3R 5397001 5397019 GACTTATCAAGGCCTGCGA 59 5396880 5396957 AATATGGTCTTGGGTCCTGC 59 NA Drosophila melanogaster 61 Or85f FBgn0037685 FBtr0082028 1 1 1 80 3R 5224935 5225005 CAAGTTCTCGACTTGAGCG 59 5225046 5225067 CCTCTTGTACGCTATAGAAGCA 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 1 2 2 80 3R 5080964 5080982 ATCTGCCAAAGCTCTACGA 58 5081024 5081096 GCTTGAATCTTAGCTCTTCGT 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081994,FBtr0081990,FBtr0081993 1 5 5 126 3R 4897393 4897487 TCAGCATGTGCTTGAACAC 59 4897285 4897305 ATGGGTAACACATTTCTCCAC 58 NA Drosophila melanogaster 61 CG9797 FBgn0037621 FBtr0081947 1 1 1 107 3R 4556329 4556404 AATTTGGCTGCGAACTCTG 59 4556240 4556258 GGCCACAGTACTTACATGC 58 NA Drosophila melanogaster 61 Ctr1B FBgn0062412 FBtr0081835 3 1 1 114 3R 4143505 4144166 CTATGATCATGGTGTTCCACG 59 4144242 4144260 AAGGACACCAGGAAGATGG 59 NA Nonspecific Drosophila melanogaster 61 Sgt1 FBgn0260939 FBtr0081862 1 1 1 60 3R 4130795 4130813 AGACCAAGGTGGTCATCAC 59 4130753 4130773 TCCACAGCATAGTTCTTATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7918 FBgn0037546 FBtr0081789 1 1 1 80 3R 3908805 3908823 TGGACAGGAATATTCGGCA 58 3908865 3908953 TCGAAACGGTTCCTATTAGCA 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 1 4 4 80 3R 3848721 3848741 TCCTGAACGAAGACATAACCA 59 3848600 3848679 GGACAGATGCCAAGTTGAC 58 NA Drosophila melanogaster 61 CG11052 FBgn0040524 FBtr0081821 1 1 1 80 3R 3834618 3834637 GAGTAACATCGGACAGAAGC 58 3834503 3834575 GAAATGAAACGCCTTGCAC 58 NA Drosophila melanogaster 61 CG1287 FBgn0037506 FBtr0081554 3 1 1 60 3R 3327570 3327588 ACCGAGTATCTACGACCAC 58 3327528 3327546 GGCATGAATACGATCCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wa-cup FBgn0037502 FBtr0301649 1 1 1 86 3R 3247080 3247163 CCGTCTCAATGTGTTAAATGAG 57 3247210 3247228 ATCATGCGATTGATCAGGC 58 NA Drosophila melanogaster 61 CG42651 FBgn0261503 FBtr0302395 2 1 1 154 3R 2638292 2638310 TGAACAGTGACACTTGGCA 59 2636116 2636134 GTGAATCGGTAACGACGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ccp84Ab FBgn0004782 FBtr0081692 3 1 1 193 3R 2528442 2528537 CCTTCAAGTTTGTCTTCGCC 59 2528268 2528286 GTAGGAGAAGCGGTACTGG 59 NA Nonspecific Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 2 2 2 80 3R 2482608 2482881 GTTTCGGATAAGGGCTATGG 58 2482547 2482565 CTTGCCCATCTTGAGATCG 58 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 2 1 1 91 3R 2045634 2045943 AAGATGATGTACCAGTTCCC 57 2045562 2045580 ATTTCCGGCGATATTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 1 2 2 121 3R 1605224 1605528 CACATATCAAATTAGCCTGCTG 57 1605610 1605628 AGATATCCAGGTGGTCCAG 57 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0300911,FBtr0078674,FBtr0300913,FBtr0300910,FBtr0300907,FBtr0078672 3 7 12 105 3R 1588464 1602681 TGGAGCGGAAATACAATATCAG 58 1588296 1588314 TGAACCGTTATGAACACGG 58 NA Drosophila melanogaster 61 MED27 FBgn0037359 FBtr0078712 1 1 1 80 3R 1481353 1481371 GGCGCTCCTACAATTACTG 58 1481413 1481493 TATCTATGTGGTCTGGATCGT 57 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 3 3 3 123 3R 1314882 1314900 GGAAACCAAGGACTTGGTG 58 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 RpL35A FBgn0037328 FBtr0078769 2 1 1 184 3R 1291673 1291692 TATGTCTACAAGGCCGAGAC 59 1291440 1291526 GATGGGTACAGCATGATGC 58 NA Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789 1 1 2 79 3R 1202657 1202738 TTGTTCCGTTCGCAAAGTG 59 1202781 1202799 CTATAGGACTGCACCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31530 FBgn0051530 FBtr0078882 1 1 1 114 3R 583352 583370 AGTACGACTTGGTCTGCTC 59 578908 583277 GGACTGAAATATTTCAGCAGCT 59 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568,FBtr0112567 2 2 2 105 3R 363604 363622 TTGATTTGACGCATGTGCA 59 360238 363535 CCGCTTAAGTCCACATCAC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1837a FBgn0086660 FBtr0091629 2 1 1 60 3L 5757427 5757448 TCTCAACACTTGCAAAGATCAG 59 5757388 5757407 TCCTGAATAATAGGCCAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32205 FBgn0052205 FBtr0075000 1 1 1 160 3L 19416412 19416486 TTAAATCCGACGTCCTTGTC 58 19416271 19416289 TAACCTGATAACTGGCAGC 57 NA Drosophila melanogaster 61 nvd FBgn0259697 FBtr0113473 2 1 1 80 3L 24394285 24394363 AAGTCTCATGTTCGAACGC 58 24394403 24394425 GCATCTTCCTTAGCTAAGATTGG 59 NA Drosophila melanogaster 61 CG41452 FBgn0084015 FBtr0111175 2 1 1 135 3L 23019162 23019180 CTCGGGATAGTCAACGGAG 59 23019278 23019417 TTGTAGGTTACACTTCCGCT 59 NA Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552,FBtr0078553 3 2 2 60 3L 22866468 22866488 AAACAGGTTAAGGTCTTGTCC 58 22866510 22866528 CTGCCTGTTCAAATAGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32453 FBgn0052453 FBtr0078521 1 1 1 61 3L 22690364 22690382 TCTACTTCTCAGCGTGCTC 59 22690407 22690425 TAGATGTGCTGCTACTGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0078518 1 1 2 134 3L 22680807 22680825 AAACACCACGCTGAATGTC 59 22680923 22681048 ATGAAGTAGGAGCCCTTGG 58 NA Drosophila melanogaster 61 CG6914 FBgn0037172 FBtr0078515 2 1 1 103 3L 22599678 22599696 CTAGTGGTCCTACCCAGAG 57 22599763 22599781 CATCTTCTTGTGCTCCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 laza FBgn0037163 FBtr0078508 3 1 1 60 3L 22453597 22453617 CATACGGTATCCCTACAAGGA 58 22453557 22453575 GAGCATCATGAGCAGTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0111017,FBtr0078468,FBtr0301364,FBtr0078470 3 5 5 104 3L 21900931 21900949 AATAACACGAGCAGCAGTG 58 21901014 21907890 AATACTACCAACCTCCTTTCCT 58 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421 2 1 3 96 3L 21521991 21522071 TTTAAGGTGACGAGGTTTCG 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 1 4 4 80 3L 21488570 21488707 AGACATTGATGTTCGCTACC 58 21488509 21488530 GAATATCTGGCGAATAGCTACC 58 NA Drosophila melanogaster 61 CG33288 FBgn0053288 FBtr0301013 1 1 1 82 3L 21425831 21425849 AGATGCTAAGGGATTCGTG 57 21425895 21425974 GCAGTTCATCTTCGATCCT 57 NA Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 3 2 2 135 3L 21297182 21297399 CAAAGACAACGTCGTTACTG 57 21297066 21297085 GATCACTGCCGGTAATAGTG 58 NA InUTR Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 1 3 5 94 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505478 20505632 GATCACTGGTAGCTTTCCCT 59 NA Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 1 1 1 100 3L 20402754 20403380 TCGACATCGCTCTATTGGG 59 20402672 20402690 TAATATGATCCCGGGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 trbl FBgn0028978 FBtr0078235 1 1 1 109 3L 20393602 20393620 CACCAGATCTGTCAGACTG 57 20390561 20393529 TACTGCAGTTTCGTTCTGG 57 NA Drosophila melanogaster 61 CG5665 FBgn0036977 FBtr0078182 1 1 1 87 3L 20352065 20352083 ACCGTAAACGAATCCTCGG 59 20352134 20352204 CAGCCGCATCTACAATCAC 59 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074851,FBtr0074850 2 2 3 119 3L 20228693 20228712 GCCATGCTCATGAATTCCAG 59 20228526 20228611 ATCATCGCTGTCTTCCTCC 59 NA Drosophila melanogaster 61 CG9376 FBgn0036893 FBtr0074946 3 1 1 63 3L 19606112 19606130 GAAACCGGACTTTGTGACC 59 19606155 19606175 CAGTGCATTGTACTTGAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074942 3 1 3 291 3L 19594925 19594944 GAATCGAAACGGAGTCACTG 59 19595873 19595891 CTTCTCAGCTTGAAACGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9452 FBgn0036877 FBtr0074978 3 1 1 86 3L 19495721 19496437 GGACATGTGACTAACTCAGG 57 19495654 19495673 ATAAGGACCCATAAACTCGC 57 NA Drosophila melanogaster 61 CG32207 FBgn0052207 FBtr0074983 3 1 1 128 3L 19470944 19471018 ATGTTTAAATCCGACGTCCT 57 19470835 19470853 GTAGGCCATTAGTACAGCC 57 NA Drosophila melanogaster 61 CG32198 FBgn0052198 FBtr0075099 2 1 1 60 3L 18520144 18520163 TTTGCTCTTGATGATCCCAC 58 18520186 18520204 GCGAAGTTGGAGATGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 grim FBgn0015946 FBtr0075130 1 1 1 60 3L 18296954 18296972 ATCGATGACCATGTCGGAG 59 18296912 18296930 AGCGTAGCAGAAGATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7330 FBgn0036780 FBtr0075127 3 1 1 80 3L 18142291 18142309 TAATCGTGCTATCCGTCCG 59 18142350 18143794 TGCGAGATCTATATGTACTGGG 59 NA Drosophila melanogaster 61 CG32193 FBgn0052193 FBtr0075145 3 1 1 195 3L 17954849 17954867 TATGGTATCGGATTTGCCC 57 17957924 17957943 CGAATGTTTCAAACTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151,FBtr0075148,FBtr0075150,FBtr0075149 3 4 4 135 3L 17948142 17948326 AGCAGCAGATCGGAATACTC 59 17948026 17948044 TCTAGCTTTCTGTAGCGGG 58 NA Drosophila melanogaster 61 CG32182 FBgn0052182 FBtr0075188 1 1 1 60 3L 17751476 17751494 GGGAGCAGCAATTAAACCT 58 17751513 17751536 CCTAAGTGATCCAATATTTGAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mip FBgn0036713 FBtr0075241 1 1 1 97 3L 17339143 17342487 ATAGTCAGCTATGGCTCACAC 59 17339066 17339084 CACTGGCCACCAAATTACC 59 NA InUTR Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 1 2 2 80 3L 17044545 17044969 CCTCAACCTGCAAATCGAG 58 17045011 17045031 ACCAGAATGCTCCTTAATTGC 59 NA Drosophila melanogaster 61 Fit2 FBgn0036688 FBtr0075275 3 1 1 60 3L 17018094 17018114 GTGGTTAATCTATGCAAGCAG 57 17018136 17018154 GTTTGCACAGGGACAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 1 4 4 80 3L 17008138 17008158 GATACCTTCAAGACCAAGTGC 59 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 sina FBgn0003410 FBtr0075332 2 1 2 143 3L 16847495 16847513 CGTAAAGGCTGACTGACTG 58 16847620 16849409 CTTGTGCTTCTGTATGGCA 58 NA InUTR Drosophila melanogaster 61 sina FBgn0003410 FBtr0075333 1 1 2 163 3L 16849047 16849065 GTGGGCACAATAGTTTGGA 58 16849504 16849522 GACATTGGAAGGGTTCTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TSG101 FBgn0036666 FBtr0075329 2 1 1 81 3L 16836406 16836425 GTTACCTTCGGAGATCATCC 57 16836468 16836618 GCATATAAGAGTTCGTGGGA 57 NA Drosophila melanogaster 61 st FBgn0003515 FBtr0075391 2 1 1 80 3L 16493261 16493341 CAGAATATAACCTGCTTTCAGGAG 59 16493379 16493398 GAAGCTGTACTTGTCCAGGA 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 2 3 3 65 3L 16485800 16485818 ATTGCCATGCTATTGGCTG 59 16485591 16485772 AATGATTGTCGTATCCCTCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 1 3 4 80 3L 16376953 16377036 CTTTACTCCCAACTTATCTTCGTG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0110866 2 1 2 93 3L 16336506 16336524 GATCGGATCACTTTCCCAC 58 16336581 16336906 CATAATAGGCACGCTGCTC 58 NA Drosophila melanogaster 61 CG33061 FBgn0053061 FBtr0113448 1 1 1 82 3L 16323171 16323189 AACCTGCTCTTGGGTAGTC 59 16323234 16323358 ATGCAGTACCAGATCAACGA 59 NA Drosophila melanogaster 61 CG5235 FBgn0036565 FBtr0075497 1 1 1 107 3L 16082941 16082960 CTACGATGTCCTAGATGGCA 58 16082798 16082871 AACGTATCAGCGGAGAGTG 59 NA Drosophila melanogaster 61 Taspase1 FBgn0036564 FBtr0075498 3 1 1 192 3L 16079614 16079632 TTCACAAGACGTTCAAGCA 57 16079370 16079458 GAATGCACAAACTTTGGCA 57 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075501 3 1 3 122 3L 16033159 16035518 TGATCGACACTGTTTCGAC 57 16033055 16033074 CATAAGACGGAAGATCAGCT 57 NA InUTR Drosophila melanogaster 61 dbo FBgn0040230 FBtr0075505 3 1 1 85 3L 15822963 15823119 GCGATATGATCCCAGACAC 57 15823168 15823186 TATTGAACACAGCACAGCC 58 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543 3 1 3 99 3L 15806416 15806436 TTATTCTGTGCTTTGGACTGG 58 15805333 15806358 ATATGCTTGTTCTTGCCTAACG 59 NA Drosophila melanogaster 61 Eig71Ei FBgn0014849 FBtr0075574 3 1 1 88 3L 15653062 15653080 TTAACGACTACTGTCGCCG 59 15653131 15653211 GCGCACAGTAGATAAACAGG 59 NA Drosophila melanogaster 61 CG7427 FBgn0036510 FBtr0075561 3 1 1 172 3L 15556819 15557370 GCAGTGCAATGAACAAACTG 58 15557504 15557523 CTCCCGGTAATAGTACTCCG 58 NA InUTR Drosophila melanogaster 61 gdl-ORF39 FBgn0028377 FBtr0091756 2 1 1 78 3L 15502666 15502684 GATTGTGGTCACACTGCTG 59 15502726 15502744 CTCCAATTTCGCCTCTTCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13458 FBgn0036479 FBtr0075637 3 1 1 93 3L 15107517 15107535 TGTCGAGTCATCCGATGAG 59 15107591 15107931 CTTGCAGAAATTGCACAGTG 58 NA Drosophila melanogaster 61 Rpn12R FBgn0036465 FBtr0075669 1 1 1 60 3L 15035154 15035176 TTTGGAGAACTACTACATGGAGG 59 15035116 15035136 CATAGATTTCTTGGCTTGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Brd FBgn0000216 FBtr0075621 2 1 1 83 3L 14965980 14965998 CTGAAGAACCACTCCATGC 58 14966045 14966063 TTCCAATTGCTCGTTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 2 3 3 80 3L 14739678 14739696 GCCAATGATGAAGCCAAGG 59 14739736 14739818 GTAAATGGAGTCATAGTAAGCCC 58 NA Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075763 3 1 3 167 3L 13968924 13968942 CCGCCCGTATATGTTAGCT 59 13969141 13969159 CGGATAGAAGCTCTTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32109 FBgn0052109 FBtr0075918 3 1 1 80 3L 12739018 12739093 CACAAGACACCTCCTTTATCG 58 12739135 12739153 AGGTTAGCAGAAAGCCCAG 59 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 1 5 5 80 3L 12001905 12001987 AAACTGAATGAACTTGACGC 57 12001844 12001864 GTAGTATCCTTCGTAGCTGTG 57 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 1 2 2 80 3L 11999276 11999598 AGAACTTTGAACAGATGCTCTC 58 11999639 11999657 TGGCTACATTTCCAAGCAC 58 NA Drosophila melanogaster 61 Muc68E FBgn0053265 FBtr0076063 2 1 1 60 3L 11961320 11961342 GGACAAGTTTCTACAAGTACCAC 59 11961282 11961303 AAGATGGAATTGGACTACTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6053 FBgn0036195 FBtr0301326 1 1 1 80 3L 11690659 11690737 CCTACTAACAGCCATGTTCG 58 11690598 11690616 ACTTTCAGCTTGCTTTCCC 58 NA Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 3 2 2 141 3L 11688023 11688041 AAGCCACTTAGTCCTGGAG 58 11687836 11687920 ACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076134 2 1 2 136 3L 11641408 11641501 GCTTTAATAGTAGTTACTGCGC 57 11641234 11641253 ATCTCGTGCTTCAATGTGAG 58 NA InUTR Drosophila melanogaster 61 CG6149 FBgn0036158 FBtr0300274 3 1 1 60 3L 11427925 11427949 CTCGGATTCATTTACTATCTCTTCG 59 11427889 11427907 TAGATCGCTGCCACAAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11726 FBgn0036156 FBtr0076172 2 1 1 60 3L 11388197 11388217 GATCCGTTCTCTAACCATTCC 58 11388238 11388257 TTCCACATACGCAAATCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7573 FBgn0036153 FBtr0076171 3 1 1 213 3L 11304957 11304975 AATCAGATCGGCATGAGTG 57 11305152 11305243 GTTTATCCTTGGAGGCCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG34012 FBgn0054012 FBtr0100067 1 1 1 96 3L 11102163 11102257 TGCTAGTGCCTATGATTAACAC 58 11102088 11102106 TCCATGAAGAGCATCTCGG 59 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 3 3 3 80 3L 10889923 10889942 CGACAAGGATGGATTTAGGC 58 10889708 10889882 GAGGTTACCAAGAGTACCTCC 59 NA Drosophila melanogaster 61 CG6409 FBgn0036106 FBtr0076273 1 1 1 81 3L 10874948 10875116 GAAGTCGGTTATTATTCTCTTAGCC 59 10874891 10874910 CTCCTCAGAGGTAGACTCCT 59 NA Drosophila melanogaster 61 CG42535 FBgn0260643 FBtr0300948 2 1 1 124 3L 10623543 10623563 CCATAGTCGGCTTTATAACCG 58 10623382 10623459 GGCGCTTTCAACAAATATTCC 58 NA Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 3 1 1 60 3L 10145183 10145253 CAATATGATGTTCGATGAGAGC 57 10145272 10145292 GAAATAGGCCATGTTCACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 1 1 1 114 3L 9962428 9962955 TAGCAAGCTCCGGAATGAG 59 9963033 9963051 GCCCAATATGGCACTATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Or67a FBgn0036009 FBtr0076375 1 1 1 80 3L 9524083 9524163 AGAGGTTAATAGATGCTAGCG 57 9524205 9524223 TCTTGAATCGTTTGTCGGA 57 NA Drosophila melanogaster 61 CG3529 FBgn0035995 FBtr0076461 2 1 1 90 3L 9442913 9443129 GTGGTAAGTAAATCGACGAAAGAG 59 9443341 9443359 TGGTCAGCTCCTCAATTCC 59 NA Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 2 2 2 121 3L 9011176 9011909 GCATACCAGATCCGTTTCC 58 9011073 9011091 CTGCTTCCATAGATCGTCG 57 NA Drosophila melanogaster 61 GNBP3 FBgn0040321 FBtr0076510 3 1 1 60 3L 8949198 8949219 CAGGTACTGGAAATAACTCCGA 59 8949238 8949258 CATTCGAGGGTGTAATTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13309 FBgn0035933 FBtr0076582 2 1 1 92 3L 8804027 8804117 TGCAGGCAATATGTGAACTG 59 8804169 8804190 GGAGGTACTATCGAAGTAGGTG 59 NA Drosophila melanogaster 61 CG6576 FBgn0035924 FBtr0076576 3 1 1 60 3L 8749983 8750004 ATGAGTTTACGAAATCCGATCC 58 8750024 8750043 GTCAAATCAGTAGTTGGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp16 FBgn0000356 FBtr0076574 2 1 1 133 3L 8725297 8725317 GAATTCCCTCAACCGTTATGG 59 8725411 8725564 TCTTGAAGACTGGATCGACC 59 NA Drosophila melanogaster 61 SrpRbeta FBgn0011509 FBtr0076598 2 1 1 88 3L 8712804 8712823 ATATAAACACCGTGCCAAGG 58 8712678 8712753 TGTACAGAAAGTCTGCCAC 57 NA Drosophila melanogaster 61 CG33057 FBgn0053057 FBtr0076678 1 1 1 60 3L 8397982 8398002 AGAATATTACCCATGTGAGCC 57 8397942 8397962 CAATGTCTGTAATAGGTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr66Cb FBgn0035875 FBtr0076601 2 1 1 115 3L 8330822 8330841 AAATCGAACGCATCTCACTG 59 8330918 8331020 GGGAGGAGCATAGTAATCCA 58 NA Drosophila melanogaster 61 RNaseX25 FBgn0010406 FBtr0076752 2 1 1 80 3L 7963777 7963795 CCAGCGGTTTCTATTCGTG 59 7963837 7964056 GAATACGATATGTCGCTGAGG 58 NA Drosophila melanogaster 61 CG32365 FBgn0052365 FBtr0076746 1 1 1 167 3L 7863000 7863018 CACCGCCAACATGATACAC 59 7863149 7883152 AAGATGTTGGCATCCTGCT 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 3 13 15 85 3L 7703370 7703458 GCTTCTCGATAATGACCATAATCC 59 7703308 7703329 TTTGGTTACCATAATGGGAAGC 59 NA Drosophila melanogaster 61 CG8596 FBgn0035767 FBtr0076881 2 1 1 80 3L 7336700 7336776 CTCAACAAGCTAGATCCCGA 59 7336639 7336658 GAAGATCATTTGTCCCAGCG 59 NA Drosophila melanogaster 61 CG10064 FBgn0035724 FBtr0076937 2 1 1 80 3L 6959185 6959206 GGATATCAACTATCTCGACACC 58 6959063 6959145 GTCATGCGTTTAATGTCCCA 59 NA Drosophila melanogaster 61 CG32394 FBgn0052394 FBtr0076955 2 1 1 80 3L 6730504 6730522 TTCAGCGAATTCCGTAACG 58 6730376 6730463 CTCAGTGTATTCATTGTTGTGC 58 NA Drosophila melanogaster 61 Glu-RI FBgn0004619 FBtr0076982 3 1 1 80 3L 6617729 6617748 CTGGCCGGAATTTAGTTCAG 59 6617789 6619533 TCGAAGATTGCACCTAATGGT 59 NA Drosophila melanogaster 61 Or65b FBgn0041624 FBtr0077005 1 1 1 95 3L 6318737 6318758 TTTATAAGGTCGGATGGAAGAC 57 6318814 6318886 AGGCCATTGCTTTCATCTG 58 NA Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 2 1 1 130 3L 6027392 6027462 GCTCATTGCACCAAAGGAG 59 6027280 6027298 AAAGTAGCCGCATTGTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Sse FBgn0035627 FBtr0077125 3 1 1 81 3L 5653887 5653960 TAGTCGATGAGCGTCTAGAC 58 5653825 5653843 CAATGCAGTGATTTGACGC 58 NA Drosophila melanogaster 61 Tie FBgn0014073 FBtr0073323 2 1 1 87 3L 4512234 4512252 TGCAGTACCACATGTTCAC 58 4511534 4512183 TACGGTGTTGATCCCAGAG 58 NA Drosophila melanogaster 61 CG13721 FBgn0035554 FBtr0073328 2 1 1 82 3L 4497269 4497422 CAGTTACTACGGAATTGGTTATCC 59 4497210 4497230 AGAAGTAGTGTCCATAGTGCC 59 NA Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073341 1 1 3 93 3L 4298762 4307367 CTGACTAAAGACGCCACAC 58 4298687 4298705 TTTGGATTTCGCTACTCGG 58 NA InUTR Drosophila melanogaster 61 Dpy-30L2 FBgn0035491 FBtr0073281 1 1 1 82 3L 4047445 4047600 AAATAAAGCCCAACAATGCC 57 4047382 4047400 GAGTTGGAGTCGTTCTTGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 3 2 2 174 3L 3908526 3909017 AGAACTACGATGATGAGCCC 59 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 CG33159 FBgn0053159 FBtr0073104 3 1 1 60 3L 3204330 3204349 ATTTCGGAAGTTCCGTACCT 59 3204289 3204310 ATCCTCCACAGATAAAGTAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scramb2 FBgn0035390 FBtr0073005 1 1 1 147 3L 3045121 3045730 ACTTCAAGGTATTGAGCGC 58 3044992 3045010 AATATGAGCGCCTTCATGC 58 NA Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 2 2 2 80 3L 3039188 3039210 CAAGTTACTCCAAGAACTGACTG 59 3039247 3039336 ATGTGAAAGACCGTATAGTCCA 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 1 2 2 80 3L 2961808 2961826 TCCGACTCTCCTATACGGT 58 2961867 2961947 GGACAATTGTCCAGATTCTGAG 59 NA Drosophila melanogaster 61 CG9970 FBgn0035380 FBtr0073010 2 1 1 60 3L 2915332 2915350 TTGGTGGGTCTATCACGTC 59 2915290 2915309 CTGGTATGGGAAGTCAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 2 2 2 106 3L 2783377 2783395 CTTGGAGAAGCGAATGTCC 58 2783465 2783746 TCTTGCGACATAGAGGGTG 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 1 4 4 80 3L 2499739 2499759 AGCCTCATCACAAATAAGTGC 59 2499612 2499697 CACAGCCATAACCTCATCG 58 NA Drosophila melanogaster 61 CG9004 FBgn0035336 FBtr0072890 3 1 1 80 3L 2374607 2374627 ATGAAGACCTAACTGGAGAGG 59 2374666 2374740 TGTCCTCTTTAATCTTAGGTGC 58 NA Drosophila melanogaster 61 CG15820 FBgn0035312 FBtr0072913 3 1 1 111 3L 2174215 2174233 GGCAAAGATCAGAAACGGT 58 2173967 2174140 ATACTGCAGGCGTTTATGC 58 NA InUTR Drosophila melanogaster 61 CG13924 FBgn0035286 FBtr0300120 1 1 1 60 3L 1871071 1871089 CCACTCTATCCTCTGCCTC 58 1871112 1871131 ATCTTGTAGTTCATCCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2021 FBgn0035271 FBtr0072791 1 1 1 60 3L 1777279 1777297 GTCTCCATCATTACGGCAG 58 1777237 1777255 TCTGGTCGAATCCCTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 3 2 2 84 3L 1749646 1749727 TGGATAAGGAAGGAGTGCG 59 1749774 1749793 GCTCTCAGGCAGGAATAGAG 59 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 3 3 3 80 3L 1539121 1539208 GAATCTGTATAGATGTCTTCCTCGA 60 1539241 1539264 ACCTCGTAGAGTATGTTGTATACG 60 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705,FBtr0072704,FBtr0072703 2 3 3 80 3L 1527485 1527504 TTCAACTGGAACCACATGGA 59 1527367 1527442 CCAGTACTTCAGGCTCTCC 59 NA Drosophila melanogaster 61 CG17180 FBgn0035140 FBtr0072550 1 1 1 89 3L 541882 541900 GTGCCAGTACCAATTGCTG 59 541953 542028 TTGATCTGCCTTATGCGCT 59 NA Drosophila melanogaster 61 mRpL17 FBgn0035122 FBtr0072503 2 1 1 60 3L 265000 265019 TTGAACTGTTCTACAACCGT 57 265042 265122 TTGGAAATGAGCAGTTCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34453 FBgn0085482 FBtr0299518 1 1 1 80 3L 232898 232919 AGCAAGAAATGGTACAGAATGG 59 232782 232859 CAATGGTAGAGCTTGAAGTGG 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072492,FBtr0072493,FBtr0072490,FBtr0100224 1 6 6 63 3L 217666 217684 CTGTTTCCATTCATGCCCG 59 217711 217729 GTTCACGTTATCACTGCCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352,FBtr0273353,FBtr0273351 1 3 3 80 3L 146639 146658 GGTCTTAATCTCACCTTCGC 58 146701 146784 AGTCACAATGCACCTTACG 58 NA Drosophila melanogaster 61 snoRNA:Me28S-G1083a FBgn0082935 FBtr0113531 1 1 1 60 2R 20072372 20072391 ATGAGCAATAACTTTCGCCC 59 20072412 20072432 CAATCTCGCATTCAACATGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 NaCP60E FBgn0085434 FBtr0112670 3 1 1 80 2R 20799688 20799787 CCGATTACTGAGGTTAACGAC 58 20799826 20799847 GTGGTCGAAAGTGATCTTAGAG 58 NA Drosophila melanogaster 61 CG30161 FBgn0050161 FBtr0072333 2 1 1 60 2R 20551292 20551313 AGATGGGACACTTACTAACGAG 59 20551253 20551272 CAAGGCATGCGGTATAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42360 FBgn0259742 FBtr0299959 1 1 1 80 2R 20497410 20497428 AGAGGCGAGTAATAAGCCG 59 20497472 20497550 GAGTTGCCATGAGCAAAGG 59 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867,FBtr0089868 1 2 2 80 2R 20462596 20462678 CATGCAGTATGATATGTCACGG 59 20462718 20462737 CTGCCATCCTGCATATAACC 58 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 2 1 2 83 2R 19954084 19954103 ATGGAATGATCCCAGAATGC 58 19953690 19953792 TTATCCTCAATCTGGAGGGA 57 NA Drosophila melanogaster 61 CG34213 FBgn0085242 FBtr0112406 1 1 1 81 2R 19854979 19855051 GAATTCAGATGAGGGAACCC 58 19854917 19854938 GAACTGGAAACTAAATCCAGCT 58 NA Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 1 2 2 80 2R 19520718 19520737 CCCTACTATGGACTGTAGCG 59 19520779 19529772 TCACCATGTGACAAATCGTC 58 NA Drosophila melanogaster 61 Pi3K59F FBgn0015277 FBtr0072064 2 1 1 80 2R 19448155 19448248 GCAAATCAAGGTAGGGACG 58 19448291 19448310 AATCTCAGGATCGGATCCTC 58 NA Drosophila melanogaster 61 vir FBgn0003977 FBtr0072037 1 1 1 87 2R 19249332 19249350 TAACCTGACAAGCGTGGAG 59 19249207 19249281 GAAAGTGAAGTCGTGCTCC 58 NA Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044 2 1 2 112 2R 19206712 19206730 CATTTGATTCGGGCTTCCA 58 19206521 19206539 CAACTTGGTGGTCAATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302775,FBtr0302769,FBtr0302774,FBtr0302771,FBtr0302768,FBtr0302772,FBtr0302770 2 8 13 80 2R 18817587 18817727 GCGATTTCAACTACAACATTCG 59 18817768 18817786 GACTGAGACCACTCACAGG 59 NA Drosophila melanogaster 61 CG3501 FBgn0034791 FBtr0071907 3 1 1 91 2R 18769953 18769971 ACCAGTGCCTGTATGTCAC 59 18769399 18769419 GTAGCCTGCGATTACTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30268 FBgn0050268 FBtr0273311 3 1 1 80 2R 18601503 18601597 GCACATCTACGAGGAACTC 57 18601639 18601659 GGCAAATCGAAAGATATCTCC 57 NA Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840 3 1 2 97 2R 18313878 18313899 CATATACATGTGGGTCATCCAC 58 18313744 18313820 ACTCCATAAGCCAGAGCAG 59 NA Drosophila melanogaster 61 qkr58E-2 FBgn0022985 FBtr0071828 1 1 1 102 2R 18303859 18303940 CTAATTGACGAAGCTCTGGAG 58 18304004 18304022 TTTGGGACAGCTTGATGGT 59 NA Drosophila melanogaster 61 Rtf1 FBgn0034722 FBtr0071820 3 1 1 80 2R 18265087 18265162 TCCGCTACCAGTCAATACG 59 18265206 18265224 AGATTCAGCGAACGTTTGG 58 NA Drosophila melanogaster 61 CG15674 FBgn0034642 FBtr0071659 3 1 1 110 2R 17519970 17520478 AAACGAGAAGGCAAACCTC 58 17520552 17520570 CTTCCAGTCAGTTCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 3 2 2 107 2R 17209251 17209327 TATACAGAAAGGGTCATACGGA 58 17209165 17209183 GAATAACCAAAGCCACGCA 59 NA Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 3 2 2 91 2R 17103409 17103489 TCTACTGTGATCAGCACCT 57 17103336 17103355 CAGGATTTCCTCGGTAATCG 58 NA Drosophila melanogaster 61 CG4286 FBgn0034601 FBtr0071627 2 1 1 98 2R 17065771 17065789 CATGTGCTACCAAGACACC 58 17065629 17065709 GCTTGGTTAGCTCTTCGAG 58 NA Drosophila melanogaster 61 CG9344 FBgn0034564 FBtr0071520 2 1 1 133 2R 16864739 16864828 TTGACTATCGAGGTGTGCT 58 16864925 16864943 GTAGAGGACATTGTTGCCG 58 NA Drosophila melanogaster 61 CG13437 FBgn0034541 FBtr0086235 2 1 1 175 2R 16549614 16549635 CGAGGATCACTATATGAACCAC 58 16549771 16549846 GAGGAGGTGCATTGATCAC 58 NA Drosophila melanogaster 61 DMAP1 FBgn0034537 FBtr0086232 3 1 1 80 2R 16532861 16532940 GAGTTTAAAGTTGATCCCGCT 58 16532979 16533000 CAATACCATATCGGAACGAAGC 59 NA Drosophila melanogaster 61 DMAP1 FBgn0034537 FBtr0086232 1 1 1 80 2R 16532858 16532938 CAGGAGTTTAAAGTTGATCCCG 59 16532977 16532997 TACCATATCGGAACGAAGCTC 59 NA Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 3 2 2 84 2R 16518245 16518263 AACGATCGCATTATGGAGC 58 16517761 16518201 GATAGACGATCAGCAATAGAACC 59 NA Drosophila melanogaster 61 Obp57a FBgn0043535 FBtr0086294 2 1 1 69 2R 16392676 16392695 GTTCAACACTAGACTTGCCA 58 16392727 16392796 TTGGCTTTCCTTAGCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG16739 FBgn0034505 FBtr0086286 3 1 1 130 2R 16229945 16230025 ATTGTCAAAGTGGAGCTGC 58 16230119 16230137 TTAAGATCGCCATTACCGC 58 NA Nonspecific Drosophila melanogaster 61 CG16868 FBgn0034498 FBtr0086302 1 1 1 80 2R 16172461 16172482 AGAGCGATATTTGAGTGATACG 58 16172346 16172423 GTGATGGAGACAAGAACATCTC 58 NA Drosophila melanogaster 61 CG9864 FBgn0034490 FBtr0086320 1 1 1 94 2R 16136032 16136052 TGTACGGCATCATTAACTGTG 58 16135893 16135977 CTGATCGATTGTGTTCTCGT 58 NA Drosophila melanogaster 61 ppk6 FBgn0034489 FBtr0086321 2 1 1 80 2R 16133518 16133538 GTCTATTTGGCCAAACAAGTG 58 16133405 16133479 ACCCAAATCCGATAATAGTCCT 58 NA Drosophila melanogaster 61 Obp56i FBgn0043532 FBtr0086337 1 1 1 80 2R 15755672 15755749 ACATGTTTCGTACAAGCAGG 58 15755791 15755810 ACGATTCGCAACATCTTGTG 59 NA Drosophila melanogaster 61 Obp56h FBgn0034475 FBtr0086335 1 1 1 83 2R 15703127 15703203 ATGGGACAGTGTAATCCGG 59 15703250 15703268 CTCCTTGAGATCAGCCTCG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0100392,FBtr0086451,FBtr0086457,FBtr0086454 1 18 19 83 2R 15358256 15358279 CCATCAAGATAATTGACAAGACCC 59 15358315 15358398 CCAGCATCTTCATTATTCTAACCTC 59 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 3 2 2 80 2R 15265128 15265146 GAGGAGAATCCTCTGCAGG 59 15265188 15265282 CAAGTTGATGAGAGCTTTGCA 59 NA Drosophila melanogaster 61 CG18609 FBgn0034382 FBtr0086643 2 1 1 158 2R 14630986 14631063 CATACCTCAAGCGGATCCT 59 14630846 14630865 TTGTAGACCTTCAAGACCGT 58 NA Drosophila melanogaster 61 sec6 FBgn0034367 FBtr0086709 3 1 1 123 2R 14513802 14513890 GAAGGACTTTCTAGCTATCTTGAC 58 14513972 14513990 GATCCGGATGGGACATCAG 59 NA Drosophila melanogaster 61 CG30115 FBgn0050115 FBtr0300421 2 1 1 85 2R 14446959 14447038 TCATCAAGGGATACCTGCAG 59 14446893 14446913 CTCTTCAATGTTGGCGAAGAG 59 NA Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 3 2 2 91 2R 14182689 14182764 ATGAGGAAACGATGGTTGAG 58 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA InUTR Drosophila melanogaster 61 pen-2 FBgn0053198 FBtr0089842 2 1 1 166 2R 14165178 14165265 ACTTCTTTGCTGGCTTTGC 59 14165467 14165487 GGCAGTTAGTACTATCAGCCA 59 NA Drosophila melanogaster 61 CG34196 FBgn0085225 FBtr0112389 1 1 1 60 2R 13997588 13997608 CATGGACTATGACACCTTGGA 59 13997629 13997648 AAAGGCTCGAAATAAGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PpY-55A FBgn0003140 FBtr0086817 1 1 1 60 2R 13843723 13843744 TTATTTCTCGGTGACTATGTGG 58 13843684 13843703 ATAGCAGGCAAATTGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dcr-2 FBgn0034246 FBtr0086904 2 1 1 81 2R 13466230 13466317 CTAAGAGACACAATTTACAGCG 57 13466170 13466190 GTACTTTACACGCTTTGAAGG 57 NA Drosophila melanogaster 61 CG14482 FBgn0034245 FBtr0086905 2 1 1 84 2R 13460017 13460164 AGTTCCTTCATCCGATCTGG 59 13459952 13459970 GTAGGACCAGCTTCCAGTC 59 NA Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 1 2 2 80 2R 13403020 13403095 GCGGTTTCTATCCTAAACACC 59 13403135 13403155 TATGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 3 1 1 86 2R 13306732 13306916 GGTCTGGATGAGTCTATGAAGG 59 13306667 13306685 GTATGGCCGTATGTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17290 FBgn0034201 FBtr0086989 3 1 1 92 2R 13042220 13042238 TTGAGCGCAGTCTAAACAC 58 13042388 13042406 AGAAAGCTCCGAGACATCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Amy-d FBgn0000078 FBtr0086983 2 1 1 200 2R 13013535 13013553 GGCAGCAATCAGATCTCCT 59 13013717 13013735 AATGTAGATGGAAGCCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087054 2 1 2 117 2R 12845594 12845615 CACCAATATTGCGATATGTACG 57 12845693 12845779 TTAGCTGTTTGGATGCCTC 57 NA Drosophila melanogaster 61 CG34460 FBgn0085489 FBtr0112766 2 1 1 80 2R 12714425 12714443 TAGCCTGTTTGATCACGTG 57 12714486 12714561 ATTTGCATCCGTTCTTTCCT 58 NA Drosophila melanogaster 61 CG15919 FBgn0040743 FBtr0087032 1 1 1 149 2R 12680224 12680245 GATGCTGACAGTAATATTGGTC 57 12680446 12680464 CAGTACTTTACCCAGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33459 FBgn0053459 FBtr0089859 2 1 1 87 2R 12375706 12375725 AGTCTCAACACCATGGATGG 59 12375775 12375873 GGTAAGCACGAATTCGCTC 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 3 2 5 112 2R 12249021 12249227 TCGAGAAGTACTACTGCGAG 58 12249302 12249320 GTACTTGCAGAGGAACTCG 58 NA Drosophila melanogaster 61 Rrp42 FBgn0034065 FBtr0087206 3 1 1 143 2R 11903002 11903075 GACATCCTGATTCTGGAGTG 57 11903179 11903199 ATTGTCCGATATGATGAGGTC 57 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 2 4 4 80 2R 11748024 11748113 CCCATGTGGTTAACAATGCC 59 11747963 11747983 TCAGGGATTTGATCTGATCCG 59 NA Drosophila melanogaster 61 CG33465 FBgn0053465 FBtr0301048 2 1 1 83 2R 11707457 11707475 TCTGGCGTGCTTATTACGA 59 11707265 11707359 GGTTTCCACCTTCATTACTAAAGG 59 NA Drosophila melanogaster 61 CG33465 FBgn0053465 FBtr0301048 1 1 1 81 2R 11707087 11707162 GTGCCAAACTCAGATCTTGTC 59 11707026 11707049 CATCCACAAGTGTAGTTAACATCC 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 3 3 3 89 2R 11587253 11587274 CCTTATATCGAAAGATCTCGCA 58 11587116 11587206 CGAGGAATCTAACATATTGCTG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8192 FBgn0034030 FBtr0087354 1 1 1 88 2R 11433019 11433037 GAGGAAGAAGTGGAGGAGC 59 11432885 11432971 GCATAGTATCCAGAGTTTCTGTC 58 NA Drosophila melanogaster 61 CG8152 FBgn0034008 FBtr0087392 1 1 1 60 2R 11197938 11197958 TGTGAAATCTGTAAGAGGGAC 57 11197898 11197919 CTGTGGATGTTTGATGAATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp51a FBgn0043530 FBtr0087420 1 1 1 149 2R 10912202 10912290 GCTTTATTCGAATCTGAAGCGA 59 10912074 10912092 TGTTACCACACCATTGGCA 59 NA Drosophila melanogaster 61 Lap1 FBgn0033984 FBtr0087407 3 1 1 80 2R 10824327 10824558 GAATTTACCGAGTTGCCCG 59 10824599 10824620 ACGACGTATTTGATTGAAGTCG 59 NA Drosophila melanogaster 61 CG12858 FBgn0033958 FBtr0087476 1 1 1 112 2R 10631361 10631379 ATGAACTACGGCATTGAGC 58 10631205 10631289 TCTGGATATAGATTGGGATCCAC 59 NA Drosophila melanogaster 61 CG12868 FBgn0033945 FBtr0301735 1 1 1 100 2R 10492605 10492686 CTGATAAGAACACGGAAGGAG 58 10492525 10492543 GAGTTTGGGTGTTTCAGCT 58 NA Drosophila melanogaster 61 CG17389 FBgn0033938 FBtr0087490 1 1 1 80 2R 10336972 10336990 CAGTCTCAGCGGAGATGAG 59 10337034 10337299 AGCTTGGTGTTGATTGCTG 59 NA Drosophila melanogaster 61 CG17386 FBgn0033936 FBtr0087488 1 1 1 60 2R 10310292 10310311 TTCGCCTATATCTTCTGCTG 57 10310333 10310352 ACTGCTTATACCAGACACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17385 FBgn0033934 FBtr0087517 1 1 1 65 2R 10298881 10298899 AGAATTCGACGAGACGGTG 59 10298776 10298852 TTGCTTCTGAAGGTTCGGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG8613 FBgn0033924 FBtr0087546 2 1 1 80 2R 10242235 10242316 GACTCAAGGAAGACCACGA 59 10242360 10242378 AATAGTGGGCCAGTAGGAC 58 NA Drosophila melanogaster 61 mRpS16 FBgn0033907 FBtr0087578 3 1 1 92 2R 10060805 10060888 ATTGTCGTCATGGAGAGGC 59 10060731 10060750 TCGTTCGTTGTAATCGTTGG 59 NA Drosophila melanogaster 61 CG6337 FBgn0033873 FBtr0087646 1 1 1 80 2R 9722517 9722535 AACCATCGACAGTGGATGG 59 9722335 9722476 GTCTTGTTGAAATTGTCCTCGT 59 NA Drosophila melanogaster 61 cid FBgn0040477 FBtr0087667 2 1 1 60 2R 9373744 9373762 GTGCGAGATGTACTTGACG 58 9373786 9373804 ATTGCGATGCTTGGTTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AQP FBgn0033807 FBtr0300286,FBtr0087766 1 2 2 125 2R 9101354 9101372 AAATTGCCCGTGTGATCAG 58 9100933 9101265 TGTCGGCCACAATAATGAG 57 NA Nonspecific Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0289995 1 1 2 101 2R 8736273 8736355 ATTATGGCTTGTGGCAGTG 58 8736190 8736208 CTTAGCCACGGTATTCCGA 59 NA InUTR Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 1 2 2 81 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512586 8512783 TCTCCGTATCTGTAGCACAC 59 NA Drosophila melanogaster 61 Cyp301a1 FBgn0033753 FBtr0087824 1 1 1 80 2R 8455032 8455053 CCAGTTTGGTCAAGTACAAGAG 59 8455094 8455166 GCTCTCCATGTACTCCGAC 59 NA Drosophila melanogaster 61 CG13169 FBgn0033704 FBtr0087997 2 1 1 88 2R 8129154 8130054 GCGGAAGTGATATTGAAATGC 58 8130104 8130122 CTGACTGCTTTGAGCATCG 59 NA Drosophila melanogaster 61 CG13175 FBgn0033693 FBtr0100143 1 1 1 103 2R 8070988 8071006 AAGAGCAAACAAGAACGCC 59 8071073 8071152 TAGATCCACCTCATGGCAC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Pimet FBgn0033686 FBtr0087984 2 1 1 99 2R 8039028 8039138 CAATTGAACTAATCGAGCACGT 59 8039198 8039216 GGTGTGCTGAAGACTACCA 59 NA Drosophila melanogaster 61 Sln FBgn0033657 FBtr0088032 1 1 1 101 2R 7737361 7737480 ACTCACAGGTATTGGAGGT 57 7737545 7737563 GAAACGCAGATTCCATTGG 57 NA Drosophila melanogaster 61 CG13193 FBgn0033650 FBtr0088029 1 1 1 113 2R 7656041 7656539 ATTCGGACCAACTCTTCGA 58 7656616 7656634 ATGTCCAGGTTCAGCTCAC 59 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074,FBtr0088073 1 2 2 90 2R 7561254 7561272 TCTCTGCACGATCATTGTG 58 7561325 7561403 TAGAAGAATCTTTCTGCCCG 57 NA Drosophila melanogaster 61 CG9062 FBgn0033607 FBtr0088181 3 1 1 80 2R 7169387 7169476 CGTCATCTTTAGTGAAGTGGG 58 7169327 7169345 AGGGTACTTTCGCTATCGC 59 NA Drosophila melanogaster 61 Vhl FBgn0041174 FBtr0088115 2 1 1 61 2R 7167492 7167510 TGGATCTGTACTGGGTGTG 58 7167535 7167553 GAAGGGCTTGAGGGTAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Eg FBgn0086519 FBtr0088183 2 1 1 157 2R 7165821 7165909 GAAGTTCTTCATTGCTTTCGC 58 7165684 7165702 CGTTAAGGTCACCCTTCTG 57 NA Drosophila melanogaster 61 CG7712 FBgn0033570 FBtr0088238 2 1 1 83 2R 6785086 6785180 TTCCCTACATCGTCATGGA 57 6785021 6785039 GATGCTTGACGAACTCCTC 58 NA Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 2 2 2 112 2R 6628680 6628758 CAGTTTGGATGATGACTTCCTG 59 6628589 6628607 AGATCCCAATCACTTGGGC 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 1 4 4 80 2R 6041760 6041971 CTTCTACCATGTGATGGTATTCC 58 6041702 6041722 TCTTCGTACTCCTTGATGGTG 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 2 3 3 81 2R 6019888 6019909 CCAGAGCTACGAAATAAAGCTG 59 6019949 6020269 GATCTTGATCACGCTCTTCAG 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088422,FBtr0088421,FBtr0088420 1 3 3 124 2R 6000450 6000525 ACATCGTTGGATTGGTTGG 58 6000613 6000631 GGAGTAGGCTGTACTGGAG 58 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 3 2 2 112 2R 5175029 5175047 TACCGATGGACTCAGAACC 58 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 Cyp4p2 FBgn0033395 FBtr0088591 3 1 1 80 2R 5125196 5125214 TAGTGCCCATGATCAAGGG 59 5125255 5125356 GAGTAAATACCTGGTCAGTGTC 58 NA Drosophila melanogaster 61 unpg FBgn0015561 FBtr0088586 2 1 1 80 2R 5083602 5083620 CCTGCAGTGACATTAGCCT 59 5083664 5086596 TGGTATAGGCTCCATTGCG 59 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 2 3 3 92 2R 4799447 4799529 AGAAGAATGCTCCTGTTATCC 57 4799375 4799393 ACTGATCGTAGGGAAGGAG 57 NA Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 2 2 2 60 2R 4126449 4126470 GGTGCATCTATTTAAGAAGCAG 57 4126488 4126509 GTAGATCTTGATCTTGTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876 2 1 2 192 2R 3849380 3849398 CTCGATAGACAACTGAGGC 57 3849146 3849164 ATGAACCATTTCGCCAGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 1 2 2 84 2R 3846784 3846862 CAAGCATAGAGTGTTGACCT 57 3846719 3846737 AGAGGCATCAATGCTTTCC 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088836 3 1 4 165 2R 3700211 3700229 AACTCTCGACTTTCGACGG 59 3700906 3700924 CGATATCCACGAAGAAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1941 FBgn0033214 FBtr0088927 2 1 1 80 2R 3598083 3598102 GGCCTTCCTAATCCTATCCT 58 3598145 3598214 AGGCTTCCATAGAACAGCA 58 NA Drosophila melanogaster 61 Gr43b FBgn0033202 FBtr0088945 1 1 1 80 2R 3547058 3547078 TTCAGGGCTTGTATATGAGGA 58 3546928 3547016 TTATCAACGAGGTGTGCTC 57 NA Drosophila melanogaster 61 CG30499 FBgn0050499 FBtr0088954 1 1 1 95 2R 3452739 3452815 AACAAGATCAAGACGGCCT 59 3452662 3452680 GTAGAGATTGACACCGGCA 59 NA Drosophila melanogaster 61 CG12164 FBgn0033158 FBtr0088963 1 1 1 80 2R 3199000 3199446 AGTCTGTTGCTACTCAGCG 59 3199490 3199508 CTTCTTCCACACTCCCTCG 59 NA Drosophila melanogaster 61 CG33140 FBgn0053140 FBtr0089046 1 1 1 60 2R 3066916 3066935 AGAAATCGTCAGGAACTCCA 58 3066955 3066976 TCTACACCATTAACCCGTAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a2 FBgn0000473 FBtr0086133 1 1 1 104 2R 2667756 2667843 CATCTCAGAAACCCTGAGG 57 2667670 2667688 CCCTTCTCAATCACAAGCT 57 NA Drosophila melanogaster 61 CG33919 FBgn0053919 FBtr0091923 3 1 1 83 2R 2511642 2511661 CGTATGGCGTGATAATGTGG 59 2511516 2511596 GAGCTATAAGATGGCCCGA 58 NA Drosophila melanogaster 61 Cyp6w1 FBgn0033065 FBtr0085987 3 1 1 81 2R 2061662 2061802 CCTCTAATGGTGAAGATTGGA 57 2061844 2061863 GATCCTTCACTTGGACTTCC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-525g FBgn0083032 FBtr0113549 1 1 1 60 2L 20419970 20419989 TTTGTGTCTCTAATGCTCCG 58 20420011 20420030 GTAGGATCAAACAGGATGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-525f FBgn0083033 FBtr0113548 3 1 1 60 2L 20419777 20419796 GAGGTAAAGTGGCATTCTCG 59 20419817 20419837 TGATTTGGGAGTGTTTGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 1 2 2 80 2L 22842664 22842684 AGGACATATTACATTGCCGGA 59 22842549 22842625 CGAACACAAATGGAATGTTCTG 58 NA Nonspecific Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 1 3 3 113 2L 21627750 21627852 TGACTCAACAGATGCTCCC 59 21627655 21627673 GCCTCATCAAGCTTAGCCT 59 NA Drosophila melanogaster 61 His2B:CG33868 FBgn0053868 FBtr0091872 1 1 1 60 2L 21537985 21538004 AGAAGAACATCACCAAGACC 57 21537944 21537962 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399,FBtr0081401 1 2 2 60 2L 20680492 20680512 TAGTGGTGCGGATTATAAGGA 58 20680452 20680470 GCTAGAGTTGGGATTGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fok FBgn0020303 FBtr0081342 3 1 1 76 2L 20084611 20084629 GAGTCCACCACTTCCTCAC 59 20082991 20083009 TCGGACTTTATCTGCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10631 FBgn0032817 FBtr0081324 1 1 1 86 2L 19754190 19754208 AATTCAGCGAATTCAGCGA 58 19754064 19754140 AACTGCTAGTGGTCCTTCC 59 NA Drosophila melanogaster 61 CG10366 FBgn0032814 FBtr0081259 3 1 1 86 2L 19584478 19584496 CTCAAGAACGAGGATTCCG 58 19584544 19584641 ACCTCGAGTTATATTCACCCA 58 NA Drosophila melanogaster 61 CG10268 FBgn0032811 FBtr0081266 1 1 1 60 2L 19580065 19580085 GATTACATATCCGAGAGGCTG 57 19579922 19579941 AGATTCGAACGATACACGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10132 FBgn0032798 FBtr0081247 1 1 1 80 2L 19524105 19524124 GTAACTATGAGGCAGCAGTC 58 19524164 19524249 TGAGAGTGACCTTAAACTTTCC 58 NA Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 3 2 2 100 2L 19506353 19507500 CAGCACTGGAGGTATTTCGA 59 19506272 19506290 TGATGATCTCCGTTGCCAG 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081214 3 1 6 167 2L 19404136 19404154 GAGGAGGGATTCCATGAGC 59 19403705 19404005 CTTCTTGCAATCCCTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31798 FBgn0051798 FBtr0081200 1 1 1 80 2L 19395001 19395082 TACTAATAGCCGAAATTGGCAG 58 19395122 19395141 CCATTAGAAAGTAGGCACGC 59 NA Drosophila melanogaster 61 CG10650 FBgn0046302 FBtr0081183 1 1 1 84 2L 18995010 18995609 TAACGCAGGAACTCTAACTC 57 18994945 18994963 ATTGTCTTCCTTGCAGGTC 57 NA Drosophila melanogaster 61 CG10176 FBgn0032682 FBtr0300674 2 1 1 105 2L 18486107 18486125 GCTATGTTGCAACGGAGAG 59 18486191 18486635 GTCTTGTAAGCTGAACATTCCT 58 NA Drosophila melanogaster 61 CG6012 FBgn0032615 FBtr0080923 3 1 1 125 2L 16860593 16860681 CCATACTTGTAAACAACGTTGG 58 16860489 16860507 GGAAGAAGATGCGAGACAG 58 NA Drosophila melanogaster 61 CG6012 FBgn0032615 FBtr0080923 1 1 1 123 2L 16860593 16860681 CCATACTTGTAAACAACGTTGG 58 16860491 16860509 AAGAAGATGCGAGACAGCT 59 NA Drosophila melanogaster 61 Cyt-b5-r FBgn0000406 FBtr0080932 1 1 1 80 2L 16789890 16790230 AAGAAGAGTGATCTCATTCACC 58 16789831 16789849 AAGGCTGTTGTATTTGGCA 58 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 3 3 3 92 2L 16451848 16451867 GATCAAGGATTTGAGTGCCG 59 16451921 16452206 GCATCATAGTACCAGCTGGA 59 NA Drosophila melanogaster 61 CG4455 FBgn0028506 FBtr0080836 1 1 1 163 2L 16353102 16353120 GCAGTTCGTACCTGTTGTG 59 16353325 16353343 GATTCCGGGTCGACTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 fzy FBgn0001086 FBtr0080833 1 1 1 85 2L 16311405 16311519 ACTTTCTGGTGAACAAAGACTC 59 16311565 16311583 GACATTGCTCTCGTTGCTG 60 NA Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 2 2 2 94 2L 16310058 16310078 ATACTTTGTACCGGAACATGC 58 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 twe FBgn0002673 FBtr0080855 2 1 1 85 2L 16261498 16261602 AAATAGATCAGGATGGCGAG 57 16261432 16261450 AAATTCTCCTGACCACACG 57 NA InUTR Drosophila melanogaster 61 CG31820 FBgn0051820 FBtr0080807 3 1 1 91 2L 16006178 16006197 ACTCAAGCATTTCTCTTGCC 58 16006055 16006073 GGGCATAGGATACCGATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10839 FBgn0028858 FBtr0080800 2 1 1 60 2L 15979943 15979965 TAATATGATCAAGGACTGGACGG 59 15979985 15980003 CTCGCTGAGATTTGGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ku80 FBgn0041627 FBtr0080763 2 1 1 83 2L 15770543 15770616 GCAACTACCTTGAGAGTCG 58 15770478 15770498 GTTGAACTTCTCGTAGTCCTG 58 NA Drosophila melanogaster 61 Mst35Ba FBgn0013300 FBtr0080682 1 1 1 89 2L 14879243 14879261 AGAAAGGATCGATACCGCC 59 14879123 14879142 CCTATCTCAGTATTGCTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18636 FBgn0032551 FBtr0080688 2 1 1 86 2L 14783923 14783997 GTACAGAGACAACATCAGGC 58 14783856 14783874 GTAGCAGTGAGCAAATCGA 58 NA Drosophila melanogaster 61 CG42587 FBgn0260955 FBtr0301742 3 1 1 153 2L 14745169 14745187 CGATGGACCTTAAGTGCTG 58 14744947 14744965 AGTTAGTTCACTGCTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42681 FBgn0261567 FBtr0302803 1 1 1 60 2L 14744445 14744519 TGTTTCAGCTTGTACTAGTCAG 58 14744540 14744558 GATCCTAAGTTGCTGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463 3 1 3 183 2L 14274925 14277316 TCTTGACCAATCTCAGTGGA 58 14277523 14277541 ACGTTATCCTTTAGCTGCG 58 NA InUTR Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 3 2 2 81 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164180 14164202 TTCTCCAGTGTATCAGAATCCAG 59 NA Drosophila melanogaster 61 Cyp28a5 FBgn0028940 FBtr0080587 3 1 1 102 2L 13978019 13978037 CGGTGACAAACAAGGTGTG 59 13978103 13978208 AAGCAGAGACTCATGTGCT 59 NA Drosophila melanogaster 61 nimB1 FBgn0027929 FBtr0080585 1 1 1 169 2L 13964586 13964604 AGGATATCGCTACGACGTG 59 13964736 13964813 CGTATTTGCCGCAGAATCTC 59 NA Drosophila melanogaster 61 CG16886 FBgn0028938 FBtr0080560 2 1 1 93 2L 13922451 13922533 CCCGTTAAGGTTCATGTGC 59 13922376 13922394 TTTCGACTGGATAGGGAGC 58 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 3 2 2 163 2L 13668324 13668342 TGTCAACGGGTCGTATACG 59 13668805 13668881 ATAGTCCTCCACAGTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33643 FBgn0053643 FBtr0091620 1 1 1 115 2L 13531345 13531363 GATTAGATGCCTGCCTCCT 59 13531440 13531512 GTTGAAGTTCGCTTTCAGAGG 59 NA Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514,FBtr0080513 1 2 2 106 2L 13535018 13546920 CCTCTTAAAGGCTGCATGG 58 13534930 13534948 GGAACAACAGCCAAATGCT 59 NA InUTR Drosophila melanogaster 61 CG31851 FBgn0051851 FBtr0080454 2 1 1 60 2L 13258080 13258101 TGGGATATGTGAAATATCGCTG 58 13258121 13258140 ATTTCGTATCCATGGTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9932 FBgn0032469 FBtr0089956 3 1 1 89 2L 13027741 13027823 CAAGTGTAACTTCGGGCAC 59 13027670 13027689 GAGTTGGACTTCGGATAGCT 59 NA Drosophila melanogaster 61 A16 FBgn0028965 FBtr0080427 1 1 1 88 2L 13020292 13020310 ACGACGAGGACTTCTTCAG 59 13019918 13020240 GAATTCAACCTTTCCCGCC 59 NA Drosophila melanogaster 61 Oatp33Ea FBgn0032433 FBtr0080384 1 1 1 80 2L 12444214 12444235 TACATGTACTTCATCGTCACTC 57 12444042 12444175 GCTTAGAATTATGCCTGTCGT 58 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0100125 1 1 4 116 2L 12404116 12404454 GTAAAGAGGTGCCATCATTACTC 59 12404022 12404040 TTCCATCATTTGCTGCAGC 59 NA InUTR Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 2 1 1 169 2L 12356591 12356662 ACATATGTCCCGGAATTGC 58 12356795 12356813 TTTAGGTAGTCATCGCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 2 2 2 82 2L 12131335 12131355 CCTACTGACCTATATGCTGCT 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 Nup160 FBgn0260937 FBtr0080199 2 1 1 80 2L 11126836 11126910 TCAATAAGATGCTTTGGCCG 59 11126950 11126971 GAACAATGATGTGATGACAGGT 59 NA Drosophila melanogaster 61 CG17086 FBgn0032310 FBtr0080142 3 1 1 134 2L 10852874 10853116 TATGCCGCTCAGAGTTCTG 59 10853214 10853232 GCGATATTAACGCGATCCG 59 NA Drosophila melanogaster 61 CG5322 FBgn0032253 FBtr0080042 2 1 1 81 2L 10454847 10454961 CTTATCAAGTACGTCAACGATCG 59 10454788 10454810 CATAAAGATAACACGAGGGTGTG 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 3 2 3 227 2L 10426913 10426933 TGTTTATGCCGACATTCTGAC 59 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5381 FBgn0032218 FBtr0080060 1 1 1 80 2L 10319557 10319634 CGCGATCTAAACGATAATTCC 57 10319497 10319517 CCTATCAATATCTTGCAGGGA 57 NA Drosophila melanogaster 61 CG4972 FBgn0032217 FBtr0079988 2 1 1 80 2L 10315063 10315352 ACAACATTATGGAAGCCGC 59 10315393 10315414 ACACAGTGTCTTGAAGTATTCC 58 NA Drosophila melanogaster 61 CG5604 FBgn0032208 FBtr0080074 1 1 1 80 2L 10288491 10288574 TAGATAACGAGGATGACGGT 57 10288430 10288449 ATTCCTCCTGTGTCTTACAC 57 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079951 1 1 2 87 2L 10232585 10232603 GCATTGGACAAATTCTGGG 57 10232654 10233769 TAACGCCATCGATCTTCTG 57 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079950 3 1 2 151 2L 10222922 10222940 ATTGTTGGTGCCTTTGCTG 60 10223052 10223154 CAAAGTCATCTTGTCTGTTGCT 60 NA InUTR Drosophila melanogaster 61 CG4747 FBgn0043456 FBtr0079930 3 1 1 81 2L 10007331 10007421 GTTAGCACTTGCTGATCGG 59 10007463 10007484 CATGGGTGATTTCATTGAAGTC 58 NA Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 1 1 1 159 2L 9937709 9937727 CAGTCAGTACTCCGAGCAG 59 9937421 9937439 GGCTTCCTCTTCGATTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34366 FBgn0085395 FBtr0112591 3 1 1 100 2L 9381757 9384654 CCTCAACTATTACAGAACTGGA 57 9381678 9381696 CCTGATTTGAGTCGAGTCC 57 NA Drosophila melanogaster 61 CG13102 FBgn0032088 FBtr0079766 1 1 1 80 2L 9012551 9012636 GTACAACTGGAATAACGATGTG 57 9012677 9012695 TTAAGTGCTAAGCTGCAGG 57 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 2 2 2 82 2L 8979079 8980061 TTGTCAAGTCTCAGTGGCA 59 8979015 8979033 GACCACAAAGAACATGGCC 59 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 2 3 3 80 2L 8939010 8939121 GACTTCATGCAATCTATGCTAGAG 59 8939160 8939178 GTTCACATTGGCGGATAGG 58 NA Drosophila melanogaster 61 SoxN FBgn0029123 FBtr0079733 3 1 1 60 2L 8826997 8827015 GGCCAACAAGAACCAACAG 59 8827037 8827057 AACCATGAACGCATTCATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 3 2 2 80 2L 8367722 8367807 GATGATCAGGACTCTGTCCG 59 8367848 8367868 CTCTACATCATCCTGAGGCAG 59 NA Drosophila melanogaster 61 CG7840 FBgn0032014 FBtr0079598 2 1 1 60 2L 8306185 8306203 CAATCTGTCGCACTATGCC 59 8306224 8306245 TAGTAAAGCTATAACGGCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8460 FBgn0031996 FBtr0079586 3 1 1 95 2L 8197482 8197502 GATATCGTGAGCAATCATCGC 59 8197559 8197643 ATGCGAGTTCCATGGAGTC 59 NA Drosophila melanogaster 61 CG7025 FBgn0031930 FBtr0079515 2 1 1 80 2L 7691363 7691440 CTGCGGGCATTCTTTATCC 59 7691301 7691323 TGGTATACGATATCTCCACTCCT 59 NA Drosophila melanogaster 61 CG6055 FBgn0031918 FBtr0079449 3 1 1 184 2L 7466651 7471536 GTCGTTCGTTTCAATCTAAAGC 58 7471681 7471699 AGAAGTACGAGTGGGACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462,FBtr0079461,FBtr0079460,FBtr0079459,FBtr0079458 3 5 5 112 2L 7455128 7455210 GTATTTCACGATCAGCGGG 58 7455034 7455053 TGAAGGTCTCACAGCAAGAG 59 NA Drosophila melanogaster 61 Wnt4 FBgn0010453 FBtr0089291 3 1 1 90 2L 7257254 7275372 AAGGCCTTTACAACGAACAC 59 7257183 7257201 ATGTATCTGCAGGGTCCAC 59 NA Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079429,FBtr0079430 2 2 2 64 2L 7026745 7026764 AGGATGTGTTAGACAACTGG 57 7026612 7026633 CTTTGTTTGCAGAGTCATAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13775 FBgn0031874 FBtr0079363 3 1 1 82 2L 6956213 6956632 GAATTGAATCTGCACGAAACAG 58 6956152 6956170 GCCAACTTCTCATCACAGC 59 NA Drosophila melanogaster 61 CG13771 FBgn0031844 FBtr0079323 3 1 1 111 2L 6663208 6663227 TCCTGGAAACAGATGCTCTG 59 6663052 6663134 AGATGGCAGATCCACACTG 59 NA Drosophila melanogaster 61 CG11043 FBgn0031831 FBtr0079289 3 1 1 233 2L 6559704 6559778 AAAGTCAGCGCTAATTGCG 59 6559975 6559993 CCCTCGTCCTTCTCAATCC 59 NA DesignRelaxed Drosophila melanogaster 61 DLP FBgn0031820 FBtr0079260 2 1 1 93 2L 6486034 6486054 ACGATGTGCTTCAAATACTGG 59 6486109 6486187 TTAAAGGCATCGTAGGCGA 59 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 1 3 3 83 2L 6325528 6325546 GAGGAGATTGACCTCTCCG 59 6325590 6325721 GGTAAGACTATCCATGCTCTCC 59 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 2 3 3 116 2L 6044340 6044436 ACATTCCAGGTTACAAACAGC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 1 1 1 62 2L 6021148 6021218 GTTATCCCGAGTACGAGCA 59 6021244 6021262 GATTCAGCAGCTTGTGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31913 FBgn0051913 FBtr0079138 1 1 1 60 2L 5784641 5784660 AATGGAAGATAAGGAGCAGG 57 5784681 5784701 AGGATTGTTCTGAATACTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 2 2 2 80 2L 5735108 5735127 CAGGAACCAATCTTTGGCAG 59 5734811 5735068 GAAGAAGACCATGGTCATTACC 58 NA Drosophila melanogaster 61 CG11030 FBgn0031736 FBtr0079135 2 1 1 92 2L 5759279 5759299 CAAGCCCGTTTATTACGATGG 59 5759353 5759437 ATGGAAGACGTAATGGCCC 59 NA Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 2 3 3 83 2L 5539760 5539780 ACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 CG4230 FBgn0031683 FBtr0079019 2 1 1 82 2L 5097213 5097541 GAACGACAAGGATGATGGC 59 5097584 5097605 ACTTCTTCAGAATCTTGCTCTC 58 NA Drosophila melanogaster 61 CG5828 FBgn0031682 FBtr0079018 1 1 1 60 2L 5094329 5094349 GTAATGTGCCAGTCAACAAGG 59 5094369 5094389 TTTAGCTTGAGAAGCTCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon25Bii FBgn0031654 FBtr0079055 1 1 1 60 2L 4952536 4952554 GGACTCCCAGATCATCACC 59 4952494 4952512 GGTGATCACATCGGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14044 FBgn0031650 FBtr0078990 2 1 1 80 2L 4943740 4943813 ACGGATAATAGATCCCAAGC 57 4943856 4943874 TCTAGGGATATCGTGGAGG 57 NA Drosophila melanogaster 61 CG11926 FBgn0031640 FBtr0077387 1 1 1 87 2L 4851546 4851618 TAGTAGTGCCAAGGTGTCC 58 4851669 4851687 TTGCGATCGTATCGTTGTG 58 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077382,FBtr0077381 2 2 2 85 2L 4795560 4795849 CACAAACGAACGATCTGCA 59 4795896 4795916 TGGAGAACTCCACGTTTAGTC 59 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071,FBtr0077434 1 2 2 80 2L 4401280 4401358 TTCCGAGGACCTTCAACTC 59 4401402 4401420 GACTTGTCGTGGATGTCGA 59 NA Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077464,FBtr0077463 3 2 2 60 2L 4382271 4382291 GCAAATAACGACGTGATCCTC 59 4382231 4382252 GATCCTCAAGAATTACCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0290244,FBtr0112925 2 3 3 60 2L 4379820 4379838 GGGAGAGTACGATGCTCTG 59 4379861 4379880 GAACAGTGTGAAGGTGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or24a FBgn0026394 FBtr0289965 3 1 1 86 2L 4165064 4165082 ATGTGGTCTACACTTGTGC 57 4164941 4165015 CTAGATTGGAACACGCTTCC 58 NA Drosophila melanogaster 61 CG42467 FBgn0259957 FBtr0300303 2 1 1 81 2L 3701366 3701436 TAGAGATTATTCGGAGAAGTGC 58 3701476 3701496 ATCATAAGTGTATCCATGGGC 58 NA Drosophila melanogaster 61 CG15412 FBgn0031528 FBtr0113018 2 1 1 115 2L 3374121 3374144 GTTCACCGACGATGATATTATGAG 59 3373918 3373996 CCATTAATAACTCCACAGACTGC 59 NA Drosophila melanogaster 61 okr FBgn0002989 FBtr0077673 1 1 1 100 2L 2991053 2991132 AAACCAAAGGATCTCAATCCAG 58 2990974 2990992 ATGAGAACCACCTTGTCGT 59 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 1 2 2 132 2L 2975263 2975281 TAGAGGTCACTCCTGAAGC 58 2975078 2975167 TCCATGAATCCCGTTACCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cpr23B FBgn0031467 FBtr0077618 3 1 1 266 2L 2838464 2838482 ACGATTTGAGATGGCAGCT 59 2838783 2838801 AGATTGGAGGCCTGAACAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Taf10 FBgn0028398 FBtr0077717 3 1 1 237 2L 2768060 2768079 TAGACTCGCCACTAATGCAG 59 2768338 2768356 TCCGAGATGAACTTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9961 FBgn0031451 FBtr0077740 3 1 1 152 2L 2744881 2744900 TACCAAAGAGCTCAAACTCG 58 2744694 2744769 GGGTACATTAAAGTCCACTCTC 58 NA Drosophila melanogaster 61 CG9883 FBgn0031435 FBtr0077693 1 1 1 60 2L 2578407 2578426 AAATCCAGAAGAGTCAGCAC 57 2578447 2578467 TTTAGCATGGAAGTGAGACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12674 FBgn0031388 FBtr0077827 3 1 1 111 2L 2080112 2080214 GGATGAAGCGCACAATCAG 59 2080287 2080307 GCAGTACTCCTGGATATTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 c-cup FBgn0031367 FBtr0077894 3 1 1 86 2L 1832362 1832439 CAAATGTTTCCTGCAAAGCTG 59 1832296 1832314 AAAGGAGACTAACGCCTGG 59 NA Drosophila melanogaster 61 CG31664 FBgn0051664 FBtr0077895 2 1 1 80 2L 1825123 1825193 AATAACAGGGTCGTGGTGG 59 1825061 1825081 CAGAAGTTCACCTTCTTGGAC 58 NA Drosophila melanogaster 61 Ranbp21 FBgn0031051 FBtr0074759 3 1 1 108 X 19545510 19545528 CATTGGTCACAGACAACGC 59 19545335 19545438 GCTAGCTAGCGTCTACCTC 59 NA InUTR Drosophila melanogaster 61 inaF-D FBgn0260812 FBtr0301267 3 1 1 180 X 11622704 11622722 TGTCCTTTGCGTTTCACTG 59 11621318 11621336 GTGCTTGTAGAACTGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32778 FBgn0052778 FBtr0070622 2 1 1 80 X 3978728 3978833 GATCCCAGTGGTTACTCACC 59 3978876 3978894 GTAACCGTGGTATCCAGCA 59 NA Drosophila melanogaster 61 CG2681 FBgn0024997 FBtr0070480 2 1 1 85 X 2603644 2603663 CATCCTTCTGTGCAAGAGTG 59 2603711 2604362 TGAAGGGTTCCTTGCAGAG 59 NA Drosophila melanogaster 61 CG17752 FBgn0038718 FBtr0083779 1 1 1 80 3R 15437840 15437858 GTTGATCAGCTTCCTCCTC 57 15437901 15437978 GTTTGTGGTAGTTGCTTGTG 57 NA Drosophila melanogaster 61 CG8043 FBgn0037610 FBtr0081902 1 1 1 101 3R 4502677 4502695 AATCAGTTCCTTGCTCGAC 57 4502759 4502843 CTATTCATGCTTGTGCTGGA 58 NA InUTR Drosophila melanogaster 61 CG7181 FBgn0037097 FBtr0078382 2 1 1 221 3L 21532496 21532517 GAAGCATTCTAACCTTACAGCA 58 21532220 21532238 AATGAACAAGGATGCAGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14079 FBgn0036849 FBtr0075027 1 1 1 60 3L 19091288 19091306 AGTTAGATCTGCAGCTCCA 58 19091388 19091406 TATCCGTGTGAACAAAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 1 4 4 80 3L 18824238 18824261 GGAGTACTGTAATCTACACAAACG 59 18824117 18824199 CCAAAGTGTAATCTGCGGG 58 NA Drosophila melanogaster 61 CG32409 FBgn0052409 FBtr0077030 2 1 1 116 3L 5893150 5893225 CCATGGATAAATGGGTGCC 58 5893305 5893323 TCTTCTGGAACATGTCCGT 58 NA Drosophila melanogaster 61 CG14977 FBgn0035469 FBtr0073158 1 1 1 80 3L 3897079 3897153 ATCTCACAGAGACCATCGA 57 3897196 3897215 AGTAGTGATGCTCGTAATCG 57 NA Drosophila melanogaster 61 CG33965 FBgn0053965 FBtr0100006 3 1 1 81 3L 1233638 1233711 ATCAAGGAGAGGGTTTCCG 59 1233753 1233774 CGTACTCCTCAGGAAGATAGTG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302775,FBtr0302769,FBtr0302774,FBtr0302771,FBtr0302768,FBtr0302772,FBtr0302770 1 8 13 80 2R 18817588 18817728 CGATTTCAACTACAACATTCGC 59 18817769 18817787 CGACTGAGACCACTCACAG 59 NA Drosophila melanogaster 61 Nup75 FBgn0034310 FBtr0086775 1 1 1 80 2R 14053260 14053341 TCAGAACAACATCGATCTTCC 58 14053200 14053219 ATATTGTGGGACGTCATCAG 57 NA Drosophila melanogaster 61 aft FBgn0026309 FBtr0089549 1 1 1 80 2R 13674237 13674310 AAGGATGAGATTAAATGGCGC 59 13674349 13674370 GCTGATCATCTGGTTTATAGCA 58 NA Drosophila melanogaster 61 Khc FBgn0001308 FBtr0087184 3 1 1 81 2R 12157151 12157308 GCTGTGACAAACATGAACGA 59 12157089 12157107 GGTTCTCCAGGTTCTCCTG 59 NA Drosophila melanogaster 61 dgt5 FBgn0033740 FBtr0087948 1 1 1 80 2R 8355184 8355202 GAACCAACAGCTTACGGAG 58 8355059 8355143 CTGATGGTTTGAATGTTCTTGG 58 NA Drosophila melanogaster 61 CG13223 FBgn0033599 FBtr0088113 2 1 1 80 2R 7145167 7145245 CATAGCCTACATAATAGTTCGAGG 58 7145282 7145302 ACAGGAATCATTAGGATCAGC 57 NA Drosophila melanogaster 61 PGRP-SC1b FBgn0033327 FBtr0088708 1 1 1 60 2R 4601490 4601508 CACTCACATCTGGAACGAG 58 4601532 4601550 TCAGGAACCACTCTAACCA 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12107 FBgn0033209 FBtr0088924 3 1 1 149 2R 3562157 3562237 AGGACAAGGAAGAGTTCCTG 59 3562419 3562437 CGTACAGGTAGACGATCCC 59 NA Drosophila melanogaster 61 CG10750 FBgn0032769 FBtr0081196 3 1 1 85 2L 19301276 19301294 TACAACCTGGACAAGGAGC 59 19301342 19301415 TAGCTGGGAACAATGTCTCG 59 NA Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 1 2 2 80 2L 17191092 17193536 TGATTGTTGCGTATCTTCCG 58 17191031 17191051 GAACATAGTCTCCGATTTGGT 57 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 3 4 4 103 2L 1085276 1085294 GTGCATCGGGACATAAAGG 58 1085127 1085210 TGATTGGCACCATTGATGAG 58 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 2 3 3 128 2L 75001 75078 CTCTGTAAACTGCGAGAGG 57 75168 75188 CAAATGTCCTGTACTTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 1 5 5 81 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071373 3 1 2 83 X 9404690 9444477 CGCAGTCAAAGAGTAAGCA 58 9404625 9404643 GTGCTCAAGTTGAAGACGG 59 NA InUTR Drosophila melanogaster 61 snoRNA:Psi28S-3316c FBgn0082970 FBtr0113519 3 1 1 66 2R 17217698 17217719 GCAATATCTACAATAGCTTGGG 57 17217744 17217764 GGATGTTTACAATCTGAACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3476 FBgn0031881 FBtr0079389 3 1 1 80 2L 7027912 7027992 ATTGGACACAATAAAGGTCCG 59 7028031 7028052 TCTATGACTCCCTTGTATCTCG 59 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888,FBtr0301073 1 2 2 80 3R 25697035 25697056 CATACAGAGCATGACATCACTG 59 25697093 25697183 CGATCTATGCTTATAGCAGATGG 58 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 1 2 2 248 2L 6528791 6528809 TCAACGAGATCGAGGAGTG 58 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 2 3 4 92 X 5794983 5795002 GAGACACCAAACCGAAAGAC 59 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 2 1 2 66 3R 27892097 27892115 AGGAGTACACGTTGGATCC 58 27887232 27892067 AGCTGTAGAGGAGCTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807,FBtr0300806 3 2 2 91 XHet 57117 57599 CAAGCATCTTAACGACGAGG 59 57653 57671 AGAATTGCATCCAACCGGA 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2179 FBgn0086666 FBtr0091922 1 1 1 60 X 658081 658099 TGCCCTCCAAGTTAACCAG 59 658039 658060 TGGAGTGAACTCACTATAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 run FBgn0003300 FBtr0077279 3 1 1 94 X 20566420 20566850 GTAAGCAAAGCTATGGCTATCC 59 20566904 20566923 ATAGCCGTAGGTCATGTACG 59 NA Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 2 2 2 107 X 20127881 20127899 AGAGCCTGTGTTCTTCGAC 59 20127049 20127811 CCATAGCCACCATTGATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 2 3 3 114 X 19508312 19508330 GTTTCCTCTACTGCAACGG 58 19508408 19508485 ATGAATGCGTCAATGGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 por FBgn0004957 FBtr0074577 2 1 1 60 X 18272897 18272915 TCCTGGTCATGTACTGGGA 59 18272855 18272874 ATCATGCCCACAAAGTAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3415 FBgn0030731 FBtr0074209 2 1 1 84 X 16166186 16166204 CTCTTCAACGAGCTGAAGC 59 16166248 16166566 TATAGCTACCATTATCCTCGCAG 59 NA Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 1 2 2 194 X 15837145 15837163 TCTAAGGCCACCTCTACGA 59 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074014 3 1 3 117 X 15276720 15277890 GGAGAGCCTAATGCAAAGAC 58 15276622 15276642 GGTATGTTGTTCATGGAGAGG 58 NA InUTR Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 1 1 2 131 X 14771780 14771798 AAAGAGAACAACAGTCGGC 58 14771335 14771582 TACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 Ste:CG33239 FBgn0053239 FBtr0300088 1 1 1 110 X 13951132 13951150 TCTGATACACAGCTGGACG 59 13950980 13951058 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 3 2 2 87 X 10300656 10300678 CCTACAAGATCAAATATCCGGAG 58 10300724 10300804 TCGTAGAAGCCGTAAATCCT 58 NA Drosophila melanogaster 61 CG12644 FBgn0040940 FBtr0071434 1 1 1 60 X 10052986 10053004 GGGAAAGGATCTGCAACAG 58 10053026 10053046 TCCGTCATCATCTTCAATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34450 FBgn0085479 FBtr0112756 2 1 1 62 X 9223972 9223990 AACTATTGCTGAGACAGCC 57 9223928 9223946 AAGACTCCCTTTCGATCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fh FBgn0030092 FBtr0071348 3 1 1 113 X 9042770 9042788 CTACTTCGAGGAGCTGACG 59 9042606 9042624 TTGATCACATAGGTGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 oc FBgn0004102 FBtr0300106 1 1 1 82 X 8527989 8534405 ATCTAGAGTACAGGTGTGGT 57 8527926 8527944 TCAAGCTATTCGACTGCTG 57 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091675 1 1 3 86 X 6766877 6766895 GAACAACCATAGTGGTGGC 58 6766945 6771955 GCTAGTGACATGTGGTTGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 2 2 2 138 X 6586547 6586565 GATCTATGGCGATGAGGGT 58 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 CG4064 FBgn0029808 FBtr0070812 1 1 1 93 X 5679050 5679068 TCATCCAGGATCTGCAACG 59 5679125 5679209 TTGGACGCCACTATCAGAG 59 NA Drosophila melanogaster 61 CG34336 FBgn0085365 FBtr0112538 1 1 1 65 X 3763082 3763564 AACGGTTTCGAAACGAACG 59 3763035 3763054 AGTATTCCAGCTTGTAGCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3939 FBgn0040396 FBtr0070508 3 1 1 73 X 3069634 3069654 TACTTCTACGGCGAGAAAGAC 59 3069689 3069982 ATGATAGTTTCCTCGGCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4061 FBgn0025630 FBtr0070330 1 1 1 93 X 1966684 1966702 TTATTGCGGTTGCCATGAC 59 1967167 1967185 CGTGTCCAAAGTAGGAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 elav FBgn0260400 FBtr0070091 2 1 3 176 X 415558 415579 GAGAACTTAGCAATTAGTTCGC 57 413206 413224 GCACTCTGCATTAGCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 2 8 8 86 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396250 396334 CACTCATTGTGAGCCAAGG 58 NA Drosophila melanogaster 61 CR40679 FBgn0085766 FBtr0114216 3 1 1 60 U 9999489 9999510 GTTTAGATGGAGTTTACCACCC 58 9999531 9999549 TCCAAAGAGTCAGTGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42444 FBgn0259875 FBtr0300172 2 1 1 60 U 9819260 9819279 GCAATTAAACAGATTCCGCA 57 9819300 9819320 TGAGGTGTATTAGTAGGTGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42432 FBgn0259863 FBtr0300160 2 1 1 66 U 8667581 8667599 TTTCGTTTGCACCAGATGC 59 8667533 8667552 ATTCATTGGTGAGGACTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 1 9 9 80 4 1068496 1068515 GGATATCTGTCTCCTGAGGT 57 1068342 1068456 GTAAAGAATAACTCCACATGCC 57 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 2 3 3 80 4 939206 939224 GTGGACCCAGAAACAAAGG 58 939090 939164 CAGTTCTCGAATGCATACCTC 59 NA Drosophila melanogaster 61 CG33978 FBgn0053978 FBtr0100021 3 1 1 85 4 185017 185103 TGTCACTTTCTCAAAGACTCC 58 184952 184971 ACTGTCCTCGATCAATTGTG 58 NA Drosophila melanogaster 61 CR33328 FBgn0053328 FBtr0082858 2 1 1 60 3R 9464696 9464714 ACAACACCAGTAGAGCCAC 59 9464654 9464674 TGATTGCTTTGTTCGGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15550 FBgn0039811 FBtr0085751 3 1 1 60 3R 26762707 26762726 TTTCACTGGAATCCATACCC 57 26762666 26762684 CAAGTGATCAGGACTACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 3 5 5 97 3R 26212310 26213195 GATTTCAAGTGCTCCCTGG 58 26212231 26212249 TCCTCCTGGATCTGATTGC 58 NA Drosophila melanogaster 61 CG4980 FBgn0039558 FBtr0085269 2 1 1 151 3R 23747949 23747968 CTGCCCTACATAGATCACGG 59 23747750 23747768 ATCAGCGGAGTCTCAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5003 FBgn0039554 FBtr0085272 3 1 1 80 3R 23741263 23741340 ATCTAGAGGATCTCAGTATTGAGGA 59 23741207 23741226 GCAAGGAAGGTAACTTCGAC 59 NA Drosophila melanogaster 61 CG4907 FBgn0039010 FBtr0084330 1 1 1 150 3R 18535615 18535691 ATGGGATAAGTCTGCACGG 59 18535483 18535502 TCCAGCTGGTATAATGGCAG 59 NA Drosophila melanogaster 61 CG5326 FBgn0038983 FBtr0084285 2 1 1 105 3R 18358618 18358699 CTGCAGATTGTCCAATTCCT 58 18358532 18358550 CATTGAAGGTCAGGAGTGC 58 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 1 3 3 80 3R 18338653 18338819 GTCGACAGATACTACGCCA 59 18338862 18338881 CAATAGCATGATGAACACGC 58 NA Drosophila melanogaster 61 CG5892 FBgn0038873 FBtr0084052 1 1 1 81 3R 17070123 17070210 AATTACTCTTTGATCAGCGGC 59 17070253 17070271 CCCGGTTGTGGGTATAGTG 59 NA Drosophila melanogaster 61 CG4000 FBgn0038820 FBtr0083935 2 1 1 62 3R 16502093 16502178 AGAGCCAAATGCGATTCAC 58 16502049 16502067 GGGTTAAGGCAAATGGCAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 2 2 2 80 3R 16326651 16326670 CTGCAGATCTGATCAACGTC 58 16326273 16326610 CTATGGCGTGCTTATAGTTGC 59 NA Drosophila melanogaster 61 CG14301 FBgn0038632 FBtr0290199 3 1 1 260 3R 14466611 14466631 AGTGCAAGTGTTAAGAGAACG 59 14456619 14466391 GAACTGTTTCATGGCAATCAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7142 FBgn0038595 FBtr0083600 2 1 1 60 3R 14104371 14104392 GAGGGATATGGAACTTTGTACG 58 14104332 14104351 GATAATTGGGTACCGCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14689 FBgn0037826 FBtr0082317 1 1 1 60 3R 6536378 6536397 CTATCTCAGTCAGTATCGCC 57 6536337 6536356 CTCTCCCTTCAGAATCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0301345,FBtr0082256 1 6 8 80 3R 6340056 6346802 CATTTAACGCATCCCTACCC 58 6339995 6340016 ATTCACTTGCAGTATCGTTAGG 58 NA Drosophila melanogaster 61 CG8436 FBgn0037670 FBtr0081977 3 1 1 80 3R 5085049 5085359 GCTCCTAGGATAAAGATCCAG 57 5085401 5085419 AATGATCTCCTTGCCTTCG 57 NA Drosophila melanogaster 61 CG8420 FBgn0037664 FBtr0081973 2 1 1 86 3R 5076630 5076648 TTCATTAGCACGGAAACCG 58 5076698 5076949 GACTGGATATTTGGCCTCG 58 NA Drosophila melanogaster 61 alpha-Est4 FBgn0015572 FBtr0081546 3 1 1 82 3R 3364196 3364273 GACGACTACAACGAAGATGC 59 3364133 3364155 TCGTCATATAGGGACTTAAGCAG 59 NA Drosophila melanogaster 61 Osi18 FBgn0037428 FBtr0078611 3 1 1 79 3R 2156475 2156494 ACTCAGGGAGGATTAGTTCC 58 2156828 2156846 AGAAGGAAGGGCAGAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 noi FBgn0014366 FBtr0078751 3 1 1 60 3R 1416497 1416518 CGAGTACCGCATATACATAGAG 57 1416458 1416477 GATTCGGAGGATGAAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 1 2 3 225 3L 23093412 23093430 AATACTTTGGCAAGCCAGC 59 23095383 23095401 TTGTGCGCATTGACATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 3 3 3 144 3L 22870965 22871046 ATTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078581 2 1 3 104 3L 22789580 22790218 AGGCAAATTTCGCAAATTCG 58 22789495 22789518 GTATAAGTTGGAGGATTGATACGC 59 NA InUTR Drosophila melanogaster 61 CG12377 FBgn0037168 FBtr0078545 1 1 1 93 3L 22496849 22497082 GTTCCCAATCCAATGCCAG 59 22496774 22496792 TTGTATGCTGAGGAGGACG 59 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 1 4 4 177 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200638 TCAACTGATTCTCCAGATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 3 2 2 83 3L 16652384 16652402 GGGTGTTCTACTACTGCGG 59 16644625 16652337 GCAATTGGAATCTAGGCCG 59 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 1 4 4 79 3L 16398478 16398496 AGCAGGAGAAATCAAACGA 57 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32155 FBgn0052155 FBtr0075459 3 1 1 97 3L 16228075 16228316 GTAGTGCCGATTTGGATCG 58 16228437 16228455 TTAAACCAAGTGGCTCCAC 58 NA Drosophila melanogaster 61 comm FBgn0010105 FBtr0075579 3 1 1 120 3L 15720881 15720901 ATTATCTGTGGATCGGAGTGG 59 15716356 15720800 GCACGTATGTCCTTATTGCA 58 NA Drosophila melanogaster 61 CG7804 FBgn0036496 FBtr0075617 1 1 1 191 3L 15466736 15466817 GTGTGAATCGAATTCACATCAG 58 15466566 15466584 CTAGATTCCGGAAACTGCG 58 NA InUTR Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070,FBtr0302207 3 2 2 60 3L 11881361 11881382 CATCCACGGACCATAATATCTG 58 11881322 11881342 AGTTGCACTCCATCTCTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7339 FBgn0036188 FBtr0076107 1 1 1 96 3L 11641964 11641982 GGACAATGTGAGGATTGCG 59 11642041 11642117 AAGAAGGACCTTATTGGCCA 59 NA Drosophila melanogaster 61 CG11714 FBgn0036170 FBtr0076156 2 1 1 93 3L 11515597 11515666 GAGTATCTGGCCCATTCGA 59 11515522 11515540 AAATGTGCAATCCGTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 3 1 1 85 3L 11114489 11114665 TTATTCCTAGGATTCCGGTGC 59 11114712 11114730 CAGACAGTGAATGCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 1 2 2 138 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087228 11087302 CAAAGTGTTCAACCTCCTCC 58 NA Drosophila melanogaster 61 RpS17 FBgn0005533 FBtr0076479 1 1 1 92 3L 9422332 9422350 GACTTCCACACCAACAAGC 59 9422199 9422276 CAAATGGGTGACATAGCCG 59 NA Drosophila melanogaster 61 CG3982 FBgn0035988 FBtr0076485 3 1 1 102 3L 9409435 9409454 TCAACCAGATGCACAAATGC 59 9409285 9409374 CTGAGAGGGATATCCATTCAGAG 59 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 1 3 3 80 3L 8977956 8977976 TTCAACTCAGAAATCTCGAGG 57 8977751 8977915 TCTTTGGAAGCTCGATTCTG 58 NA Drosophila melanogaster 61 CG13312 FBgn0035931 FBtr0076587 2 1 1 63 3L 8799876 8799894 CAACGACACCCAGATATGC 58 8799489 8799508 ATCGCTATACGAACAGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Arr2 FBgn0000121 FBtr0076599 2 1 1 122 3L 8640897 8640916 GCCTGTGGTATTGTCATCTC 58 8640732 8640813 CTTCTCAATGGTTCCAGGTG 58 NA Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273349 3 1 2 146 3L 8639334 8639352 CTTGGGCTTGGATTACCAG 58 8638980 8639226 CTCCTGCAATCTTCATATCGA 57 NA Drosophila melanogaster 61 CG13681 FBgn0035832 FBtr0076679 1 1 1 60 3L 8064934 8064952 AATCTCACCACGCTGAGAG 59 8064974 8064994 CCAGGCGCATATTTATTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp316a1 FBgn0035790 FBtr0076790 1 1 1 80 3L 7486132 7486153 GAAACTATGCGTCTTTACCCAC 59 7486192 7486287 GGGAAGTTCTGCATTGTATGG 59 NA Drosophila melanogaster 61 Cpr65Ay FBgn0085300 FBtr0112466 2 1 1 81 3L 6151442 6151519 GAAGCTTCATTTCGGATTTCAC 58 6151382 6151401 AACTGTTTCCGGCTTTACTG 58 NA Drosophila melanogaster 61 CG10591 FBgn0035621 FBtr0077128 2 1 1 90 3L 5592753 5592774 GAAATCCGAAGTACATCATGAG 57 5592623 5592641 CATTTCACCAACGAAGCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32249 FBgn0052249 FBtr0073303 1 1 1 187 3L 4469069 4470101 TTTCTTTCTGGCTTGGCTC 58 4470252 4470270 TAAACGGGAACCACTTGTG 58 NA Drosophila melanogaster 61 Sc2 FBgn0035471 FBtr0073159 3 1 1 207 3L 3904204 3904222 CTATGTGTCCTACCACGTG 57 3904613 3904693 AGAAACCAAGTCGAACAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG14961 FBgn0035439 FBtr0073069 1 1 1 121 3L 3330546 3330564 GAGTCCTCATAGTGGCCAG 59 3330649 3330723 ATGACTCGTAGACCGTCTC 58 NA Drosophila melanogaster 61 CG11815 FBgn0035299 FBtr0072852 3 1 1 61 3L 1970836 1970860 GGCTATCATCGATTCTCATTTATGG 60 1970799 1970817 CGTTCGTCTCGTAACTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12025 FBgn0035285 FBtr0072834 2 1 1 87 3L 1865847 1865865 ATATCCACGCCCATGAGAG 59 1865914 1867157 CATACTTGTTGTAGCCCTTGG 59 NA Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072833 3 1 2 133 3L 1857280 1857302 GACCGACTTTAAGAAGATGTTCC 59 1857395 1857522 TGATGAGGCTCTGGTTGTC 59 NA Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 3 2 2 81 3L 1834921 1834940 TTCGTTATCCTTTCGTTGGC 59 1834674 1834882 TTGGATGATCATAGTAATCCAGGG 60 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 2 2 2 145 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341731 1341749 ACCTTAGTCTTCTTGGCGG 59 NA Drosophila melanogaster 61 CR30068 FBgn0047303 FBtr0087541 1 1 1 132 2R 10164024 10164796 ATTACCAGAACGACTGGCA 59 10164892 10164910 GTGTTTGCTTTCGTGTCCT 59 NA Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 2 1 1 116 2R 6151281 6151299 GATCTCGGTCCCAAGATCG 59 6151120 6151204 TTTAGATTTCCATGGGTGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 3 3 6 90 2R 20818308 20818326 CAACTTCAACGTGGCTCTG 59 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 CG3611 FBgn0035069 FBtr0072377 1 1 1 60 2R 20686641 20686659 GGACATAGTGACCACGGAG 59 20686683 20686701 CCTTTCCATGGCATGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 3 2 2 134 2R 20557245 20557263 GTACTCCACCGATGGAGTC 59 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 nord FBgn0050418 FBtr0072263 1 1 1 89 2R 20140570 20140657 GAAAGGAGCAAGTTTGATTTCC 58 20140707 20140725 GTTGGTGAAGATCATCCGC 59 NA Drosophila melanogaster 61 CG30172 FBgn0050172 FBtr0072193 1 1 1 133 2R 19918360 19918504 TTCAACTCAAAGCTGCCCT 59 19918245 19918263 TAGAAGCATGGCCCATACG 59 NA Drosophila melanogaster 61 CG5597 FBgn0034920 FBtr0072131 1 1 1 80 2R 19775854 19775872 GACGATCCACAATGAGACG 58 19775913 19776012 TCGTTGGATATTATCGTGATGG 58 NA Drosophila melanogaster 61 CG30409 FBgn0050409 FBtr0072004 1 1 1 107 2R 19242484 19242560 CTACCAAAGTGTGGATTTCGA 58 19242629 19242647 AACAGAGCTGTTAGTTGCG 58 NA InUTR Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044,FBtr0072043 3 2 2 64 2R 19206238 19206256 CACTACGACCATCGTTTCG 58 19206192 19206210 AAGTCATTGGATCTCCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 2 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 2 2 2 124 2R 14547588 14547606 CTTAAATTGTCGGTGGCCA 58 14547427 14547503 TAAATTGAGCTTAAAGGCAGCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG5189 FBgn0034350 FBtr0299805 2 1 2 60 2R 14336335 14336359 CAAGGGTCTATTAAATGACTTCGAG 59 14336374 14336450 TAGCTTGATATTCAGCTTGTCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 GstE7 FBgn0063493 FBtr0086675 3 1 1 60 2R 14294823 14294842 GGTAAGCAAACGATGATTCC 57 14294860 14294883 GGAAGTCATAGACCTCAATAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nopo FBgn0034314 FBtr0086750 3 1 1 110 2R 14068249 14068267 TATGCGCCGAATTGTTTGG 59 14068340 14068418 GAGGACAGGTCTTTGATCGA 59 NA Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 1 2 2 80 2R 12945284 12945302 AGCTGGAAGGAGTCAATGG 59 12945342 12945426 GTTGGGTGACATATAAGAGATGC 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 2 9 13 81 2R 11836642 11836723 CATTTGCTACGTGCTACTCTC 59 11836581 11836603 CGCTCTAGTTATATTCGAGAAGG 58 NA Drosophila melanogaster 61 unc-5 FBgn0034013 FBtr0087382 3 1 1 81 2R 11245724 11245742 CCAACTATAGCTGCAGTGC 58 11245787 11246093 CCACCGTTGACATAAACGA 58 NA Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393 1 1 2 148 2R 11185420 11185495 GGATCATGAAGCAGTGGGA 59 11185290 11185312 GATACCTTCTATCAGTTTGTGGG 58 NA Drosophila melanogaster 61 Prosap FBgn0040752 FBtr0087601 1 1 1 80 2R 9954071 9954765 CAGTATTGTGACAGACAAATCCC 59 9954013 9954031 GAATCCGAGTTCGTTCCCA 59 NA Drosophila melanogaster 61 Ser8 FBgn0019928 FBtr0087664 2 1 1 60 2R 9322001 9322019 AACCTATGGTGGCGTTCTC 59 9322042 9322061 GGAGTTGTATGCCTCATGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 3 2 2 80 2R 9114420 9114496 CCAAATACGTAGAAGCCTACG 58 9114537 9114556 CGTTGAACTCATTGTCCTCG 59 NA Drosophila melanogaster 61 CG15870 FBgn0033798 FBtr0300670 3 1 1 88 2R 9051122 9051140 AGGATATGGCGGATATGGC 59 9051052 9051070 GATAGGGTACGGGAAGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0087938 3 1 2 89 2R 8386157 8386180 GGCAGTATGTGCTATTTACTTCTC 59 8386228 8387471 AGTCTCGTAGCATCTCCCA 59 NA InUTR Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087958 1 1 4 163 2R 8229273 8231976 CTCTGTGTAGCAATAACACATGG 59 8229132 8229150 ATGTAACCACCAATGGCCT 59 NA InUTR Drosophila melanogaster 61 CG13170 FBgn0033703 FBtr0087996 1 1 1 67 2R 8127945 8127963 TGTTTGTCCTGTCATTCGC 58 8127994 8128012 TAACTTGGGTGTGGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071,FBtr0113072 1 2 2 80 2R 7763893 7763977 GATCAACAGATTCAACGCCA 59 7763832 7763850 CTCCAAGTTGCCATAGCTG 58 NA Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 3 2 2 90 2R 7564736 7564754 CTTTCCACGATCATCGTGG 58 7564807 7564882 ACAGAAGAATCTTTCTGCCC 57 NA Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088357 2 1 2 87 2R 6242782 6243013 CTTCTTAGACAGCGATTCCA 57 6242714 6242732 CTCGGTACGCTTACAACAG 58 NA InUTR Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 3 2 2 82 2R 5966672 5969016 CATTCTCGCACTAACGATCTG 59 5969060 5969078 TATCGACGACTCGCTTCAG 59 NA Drosophila melanogaster 61 CG8788 FBgn0028955 FBtr0088581 3 1 1 86 2R 5027792 5028949 CTTCTACATCATGTGGCGC 59 5028998 5029017 ACTTTAGACACGGATCAGGA 58 NA InUTR Drosophila melanogaster 61 CG9447 FBgn0033110 FBtr0300359 2 1 1 81 2R 2762344 2762422 CTAATGGATCGACGACAGC 58 2762281 2762300 CTGAGTTATACGGCTCAACC 58 NA Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 2 2 2 109 2R 1907039 1907116 GAACGATATGCCAAAGAAGGAG 59 1907186 1907204 CAATCGCGTTCCACTTTCC 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 snRNA:U3:22A FBgn0003926 FBtr0077928 3 1 1 61 2L 1432715 1432733 CATCGACGGGTATCATCCT 58 1432758 1432776 TGCAAATCATGCAAACACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33833 FBgn0053833 FBtr0091837 1 1 1 60 2L 21484962 21484980 CGCTCAGGACTTTAAGACG 58 21485004 21485022 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33906 FBgn0053906 FBtr0091910 1 1 1 60 2L 21433602 21433621 AGAAGAACATCACCAAGACC 57 21433561 21433579 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0301928 3 1 2 199 2L 21199952 21200217 GACAAACCCACAGTTACCA 57 21199771 21199789 TTGTTGCACACTGGTTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 1 7 7 80 2L 21120172 21120285 CTGCCATAGGCATCATCTG 58 21120328 21120347 AAATGGGTTCTATGACACGC 58 NA Drosophila melanogaster 61 CG31675 FBgn0051675 FBtr0081429 2 1 1 112 2L 20868099 20868117 CAATCACCAGCGAGAAAGG 58 20868193 20868364 CTTGATGGCGTAAGCTGAG 58 NA InUTR Drosophila melanogaster 61 Pomp FBgn0032884 FBtr0081414 1 1 1 147 2L 20787981 20787999 GAACTACAACGAGCACCAG 58 20788110 20788415 GTCCATGAAGTTGCTGGAC 58 NA Nonspecific Drosophila melanogaster 61 CG41072 FBgn0259999 FBtr0100401 1 1 1 98 2L 20257866 20259436 TAAAGCCAACTTTCCCTTCAC 58 20259494 20259514 CACTCTAGCAAACGATAACGA 58 NA Drosophila melanogaster 61 CG31741 FBgn0051741 FBtr0081032 3 1 1 82 2L 18084682 18084832 CACTTTCCTACTTTGACAGCTG 59 18084870 18084893 CGATTGAGAGTAAAGTTCATGACC 59 NA Drosophila melanogaster 61 CG15142 FBgn0032645 FBtr0080995 1 1 1 85 2L 17498432 17498450 TTGCAAATAATGTCGGCGG 59 17498310 17498386 TCATCGAGACCTATAGATGTGC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442,FBtr0290265,FBtr0080977 2 10 10 138 2L 17400817 17400900 CATTGGAGGCAAGAATGGA 57 17401002 17401020 CTCATCCAATTCCACACCG 58 NA Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 3 2 2 147 2L 16247174 16247260 ATTAGAGATAAACGACGCGGA 59 16247047 16247070 GTGGGAATATACATATGGTGTTGG 59 NA InUTR Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 3 2 2 80 2L 15906996 15908082 CGAAATCGATGTCGAGACTG 58 15906935 15906955 AATTTGCCCGATATTGAGGTG 59 NA Drosophila melanogaster 61 wor FBgn0001983 FBtr0080740 3 1 1 91 2L 15425406 15425425 TAAACTCAAGTACAGCCGCT 59 15425272 15425355 GTCCTTCATCATGACTTAGGTG 58 NA Drosophila melanogaster 61 Ance-3 FBgn0032536 FBtr0100327 2 1 1 80 2L 13916498 13916517 CTACAGACAACTGATGCTGC 59 13916558 13916634 AGCAGGCGATTATACCTATCC 59 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 1 3 3 83 2L 13897288 13897306 CAAGAGATGTGCGAACTCC 58 13897353 13897435 TTGCGCCATTCCATATGAG 58 NA Drosophila melanogaster 61 Prosalpha6T FBgn0032492 FBtr0080448 3 1 1 60 2L 13232315 13232333 GTGGGTATGTCTATCGCAG 57 13232357 13232375 TCCTCATGTACTGGCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5458 FBgn0032478 FBtr0080437 3 1 1 86 2L 13183655 13183840 AATATAGGCCTCTACATAGGCG 59 13183887 13183905 ATACTGATCTCCGTTGGGC 59 NA Drosophila melanogaster 61 Sfp33A3 FBgn0259964 FBtr0300310 3 1 1 92 2L 11840045 11840068 CTCCAAGACCTATAACAACTACTG 59 11840118 11840137 CTTTCATTGCACTGTTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek2 FBgn0015400 FBtr0080252 3 1 1 60 2L 11622180 11622198 CGTTTCAGGACTACAGCTC 58 11622220 11622240 AACTCCCTGATAGGATTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6508 FBgn0032303 FBtr0080139 2 1 1 60 2L 10819620 10819639 CATCGATGAACCAGGTTCAG 58 10819662 10819680 TGCCATTCCAATTATGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 3 2 2 81 2L 10013571 10013643 CGAAGGAAAGATCACATCCA 57 10013509 10013528 GCTAATGCATCATCCTTTGC 58 NA Drosophila melanogaster 61 CG31755 FBgn0051755 FBtr0079972 3 1 1 90 2L 9999165 9999184 GAGCTGGAAGAACTAAGTGC 58 9999028 9999112 TCAACCGATTAGGGCTCTG 59 NA Drosophila melanogaster 61 CG42366 FBgn0259712 FBtr0299965 2 1 1 80 2L 9926995 9927075 ATTCTCTTCCAGGTCCTAACTG 59 9927116 9927134 CAAGTTCTCCGGTTTCAGG 58 NA Drosophila melanogaster 61 CG13795 FBgn0031937 FBtr0300709 1 1 1 80 2L 7725975 7725996 TTTGGATTAGCCTTGAAGTTGG 59 7725650 7725935 CGGCAGTATTCCAAGAATGC 59 NA Drosophila melanogaster 61 Pbprp5 FBgn0011283 FBtr0079455 1 1 1 60 2L 7497295 7497313 TCATTCTGGTGGCAATCGT 59 7497253 7497271 TCCTTCTCGTCAAAGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34380 FBgn0085409 FBtr0112617 2 1 1 80 2L 6190683 6192758 GGCATTTGATATCGCCACG 59 6192802 6192820 GAGCTCGCTGTGATTTGAG 59 NA Drosophila melanogaster 61 CG34180 FBgn0085209 FBtr0300048 1 1 1 81 2L 6060607 6060681 GCCAAGGAATATCAGTTCATCC 59 6060723 6060741 ATATGCTTAAGGGACCGCC 60 NA Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079132,FBtr0079131 3 2 2 277 2L 5436994 5437012 GGAATTACTCCTCGTGCAC 58 5436680 5436698 ATCAGAATATCCAGCTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 1 2 8 125 2L 5068210 5068296 ATTTCTCGAGCGGATCAGG 59 5068382 5070105 ATAAATGGTGCGTATGTTCTCC 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 1 6 6 130 2L 5041823 5042495 CATCGGCAACACGAAAGAG 59 5041711 5041729 CTTTCAACTCATGCCGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 slp1 FBgn0003430 FBtr0077499 2 1 1 60 2L 3826473 3826492 CATATTCTCGCCGATGATGG 58 3826515 3826533 GTATCCGTAGCTGGAAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230,FBtr0077645,FBtr0077644 1 3 3 80 2L 2996426 2996512 GTAAGCTTAGGTCCCTTTCTC 57 2996554 2996572 GTGGAGATTGACGTACAGC 58 NA Drosophila melanogaster 61 Taf10 FBgn0028398 FBtr0077717 1 1 1 156 2L 2768141 2768159 AATCGGAGATGGATGAGCT 58 2768338 2768356 TCCGAGATGAACTTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15394 FBgn0250835 FBtr0113016 2 1 1 108 2L 2592137 2592156 CTAGCAAACAGGTTGCTCTC 59 2592227 2592304 GTCTTTGCCCTGGGATAGG 59 NA Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 2 2 2 80 2L 1161974 1161992 CCCATCAATGGGATCTTCG 58 1161855 1161930 GTACTTCTCCTCTTGCGTG 58 NA Drosophila melanogaster 61 CG34016 FBgn0054016 FBtr0100071 2 1 1 156 2L 1099803 1099823 GAAACAAGTGGTCAGATTGTC 57 1099941 1102162 AACAAATACACTGCGTGCT 58 NA Drosophila melanogaster 61 CG2789 FBgn0031263 FBtr0078066 1 1 1 234 2L 559819 559837 AACCTTAAGTTCCCGTCCT 58 560035 560112 CTATGTCAATAAGGCCGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13692 FBgn0031254 FBtr0078057 1 1 1 80 2L 422122 422144 CTAATCTCTGTCAGATTTCAGCC 59 422181 422256 TCTTAGTATTATGCTGCAGACG 58 NA Drosophila melanogaster 61 smo FBgn0003444 FBtr0078129 2 1 1 146 2L 277856 277943 AACATTATGATGTTCCTGGAGG 58 278049 278068 ATTGAGAGTCCCATTGATGG 57 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078119 1 1 2 83 2L 156544 156745 GGCAAATCTACATCTGGCA 57 156792 156810 GAGCTTCCATAACAGCACC 58 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 1 3 3 82 2L 215083 215104 GTGATCAATAAACAGACAGGCA 59 214931 215040 TTCTCCGTAAGCCATTGCA 59 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 3 2 3 80 2L 229225 229244 CAATCTGTGCTTTGTCACCC 59 228273 229184 TCTTCGTTTATCGGCAAACTC 59 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 1 3 3 60 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823638 823656 ATCAGCCGATCTCTTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 2 1 2 188 2L 1038374 1038392 GAACGACAACGATGTGGTC 59 1038613 1038634 TGTCATTCTTGTAGAACAAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 2 1 1 127 2L 1755474 1755494 CACGACGATGAAGAGTTAGAG 58 1755305 1755325 GTGATGATCATTTGAAAGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 3 2 2 97 2L 2718916 2719014 ATCATTATGCTGACTTCCTGGA 59 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 1 4 4 80 2L 2738720 2738740 CAACAACTGGTACAAATTGCG 59 2738780 2738885 ACCGTCGAGAAGATGATATGG 59 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641 1 1 3 103 2L 3362708 3363006 GAGGAGAGGCATGAATCAG 57 3362623 3362642 CTTGAATGCTGTCATTGTCC 57 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641 3 1 3 125 2L 3363095 3363113 ATTGAGAAGAACACGTGGG 57 3362708 3363006 CTGATTCATGCCTCTCCTC 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077396 2 1 6 153 2L 4932038 4932058 TTATGATAACGGACCACACTC 57 4912770 4931923 GTTACTTCGCATTTGCTGC 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 3 6 6 104 2L 4909615 4909687 CATTCTATGGGTTTCCGCT 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 2 6 6 103 2L 4909614 4909686 ATTCTATGGGTTTCCGCTG 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 2 2 2 83 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892689 5892710 TAGACTGAACGCTTATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 3 3 6 122 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690127 6690983 ACTAGAATGTTGCCTGAGGG 59 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 1 3 3 80 2L 6713220 6713375 CATTCCACAGGCCTTTCTC 58 6713158 6713176 AACGAGTTGAAGATGACGC 58 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 2 3 3 80 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713839 6714565 AACAGTATGCTGTACACGGT 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0110778 2 1 3 140 2L 6720833 6721121 TGAGTGAGGTGAATGAGGC 59 6720711 6720729 GAAGCTCTTGGAGCAAAGC 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 2 5 5 82 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791313 6791526 TACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0100158 2 1 4 139 2L 7649065 7649307 CCAGATTCTGGAGATATTAGGTC 57 7648880 7648969 GCTTAATTGTACTGAAACAGGG 57 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 1 2 2 80 2L 7712223 7712308 CCGATGAATTCTTCCACTTGG 59 7712347 7712368 TTAATTGTTCCCATACCATGCC 59 NA Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 3 2 2 114 2L 7735203 7735335 GAACTACGACGTCGATTTCG 59 7735108 7735126 GTAGGACAGTCCATGTCCA 58 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 2 4 5 60 2L 7896744 7975196 AAAGAAAGGCGGAAATGCT 58 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 2 2 9 92 2L 8226598 8227679 CGCTTTATTGAAGACGGCA 58 8226524 8226542 ATCCAGGGTGAAGTTGGTG 59 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 1 2 4 91 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245142 8245161 GTAATCGTATAAGCCGGAGC 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0100236,FBtr0079916,FBtr0079914 2 4 6 100 2L 9825641 9825659 CCCTGGAGGTTAAGTTCGG 59 9815904 9819296 GTTCCACTCCAACGAAAGC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079916 3 1 6 120 2L 9798302 9806459 GCTGTTCCTCTTATAGGCAC 58 9798201 9798219 GTGGCATCTCGTGAATGTC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 2 2 2 81 2L 10229120 10229197 AGAAGCTATACTCGAACACG 57 10229058 10229076 TTTGTTATCTGGCTCAGGG 57 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 3 3 3 80 2L 10464362 10464380 TCCATGTTCAAGAGCACCA 59 10464238 10464319 ATCGCTATGATGAACAACGG 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300115 1 1 4 102 2L 11162334 11162352 GAAAGGGATCTCGAGTGGG 59 11160325 11162268 AAGAGGTTCCTCCTTGGTC 58 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 3 4 4 103 2L 11258904 11258989 GAGAATACATTCGGCATGGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 2 1 1 77 2L 11935188 11935207 ACTCATCGAAGGTATCCAGG 58 11935321 11935340 TGGCTAAGATGTAAAGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 2 2 2 80 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053025 12053046 GTTGACCAGAACATAGATGCTC 59 NA Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080332 1 1 3 91 2L 12104039 12104492 CACAGCTACGCAACTTTGG 59 12104547 12104700 AAGGGACTGAGTTCCTTGC 59 NA Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 1 3 3 169 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105115 12105187 GTTGGTGGAGATACCCTCG 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 3 4 4 123 2L 12385729 12389196 GGAGCTATAAAGGCCCTCC 59 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394 3 1 2 60 2L 12693623 12693642 TTTGGCGAAGACATAACACG 59 12693728 12693746 GAGCTTCTGTGAACTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 1 2 17 92 2L 12737606 12737964 GTGTGCATTCGAGGTTCTG 59 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 2 3 17 88 2L 12731058 12737971 ATCTTTATGGTTCTGGCTACCA 59 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0113039,FBtr0089910,FBtr0113040 1 4 9 108 2L 13261685 13271306 AGTTCTGGGTATGGACAGC 59 13271378 13271396 AGGTGAAGGGCTTCTTGTC 59 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 1 2 2 80 2L 13985571 13985646 CCGCAAATGCATAATCTCAG 57 13985510 13985531 CTCTTCGTTGAAGTTAATAGCC 57 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 3 5 5 80 2L 14189225 14195743 GAGCTAATGAGCTTGAACCT 57 14189164 14189182 GAAGCGTCGTATGAGACTC 57 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 1 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 3 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703 3 1 2 86 2L 15093612 15093630 ACGATCCCTGAGATACCAC 58 15093680 15094693 GCTATTTCCGAGTTCGCTC 58 NA Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 1 1 1 64 2L 17411573 17411591 AAACTGGACGATTGTCGTC 58 17412795 17412813 TTTGTCCAGAAAGCAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 3 3 4 80 2L 17417620 17417639 TGAAACTAGTGAGACCCTCG 58 17415377 17417579 TGGTTAGGAGTTCTGGATTCG 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 1 4 12 83 2L 17717888 17717910 CCAACGATCTGGAATACTTTGAG 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 3 4 12 114 2L 17717920 17717941 ATAGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 3 4 12 88 2L 17715907 17716689 GGTTGTTATCCACGTGACC 58 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 3 2 5 195 2L 18387306 18388391 CACAAACGAAACTCAAATCGAC 59 18388547 18388565 ATCTTCATCGTGATGGCGT 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 1 4 4 103 2L 18827251 18827520 AGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 3 2 6 137 2L 19410631 19419876 GCCAGGATATGCTCTATTAGC 58 19410514 19410532 TAACCTGGAGTGTTGTCCA 58 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 2 2 3 80 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779319 19779406 CCGTTGTTGGTATGCACAG 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301719 2 1 4 126 2L 19856250 19857679 TATGCCGAGATCTACACCG 58 19857769 19857787 TAACCGCCTCGATAACCTC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 1 4 9 127 2L 20876951 20876969 CACTAGTCAGTCGCAGGTC 59 20874420 20875087 ACAGCGTGAACAGAAATTGTC 59 NA Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 1 2 2 90 2L 20930076 20930153 CCTTAGAAGAGGTGCACCTC 59 20930005 20930023 ACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463 2 1 2 80 2L 21080466 21080484 TCCTATTCAGTGGCTGTGC 59 21080525 21080609 TAGGTATCAGCAGAATGAGTCC 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503 1 1 3 80 2L 21138354 21138724 ATCTCTTGATCAGGAGACGAC 59 21138294 21138312 TGGTAAACCTGCTCCTGTG 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 2 3 4 83 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257177 TGTAAGCTTGCAAGCTCTG 58 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 1 3 4 82 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257158 21257176 GTAAGCTTGCAAGCTCTGC 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 2 4 4 80 2L 21388772 21388791 CTTTGCCAGATCATATGCCA 58 21388832 21388923 CTACATTTGTTTCATTGGGCC 58 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 2 2 5 98 2L 21618103 21618506 TCAATAGCAATGCCACCCT 59 21618023 21618041 AACTCTCCGGAGTAACCAC 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 1 2 6 193 2L 22737572 22741956 ATACGAGATTGAGACGGCA 58 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 2 4 4 82 2R 705343 705361 CTATATGCTGTCTGCGGGA 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 3 4 4 80 2R 1435359 1435379 CGGACACAATGAATCTTTACG 57 1435418 1435502 GCATAACATACATGTGCATCAG 58 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 1 3 3 161 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 3 3 5 123 2R 2641933 2642214 AGTGAAGCCCACAGTATCC 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 3 2 2 113 2R 2717456 2717476 TCTTGGGATTATAAGGAGCGA 58 2717551 2720150 TACTCAAAGGGCAAAGCCT 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 3 3 3 145 2R 3479245 3479263 GAAGGATCCTTGTGAGCTG 57 3479369 3479454 CAGCTAAATGTTGTTTCACCTC 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 3 2 6 144 2R 3517706 3517724 TACATCTGCCTCATGGAGC 59 3517830 3521737 TCTTATTGGCTAGTTTGCCCA 59 NA Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 1 1 1 61 2R 3828676 3828694 TATACGCATGGGATTCGTC 57 3828770 3828788 ACGTGAACAGTAATTGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668 3 1 2 94 2R 4014492 4014511 GACATTAGTCTGCTCACCTC 57 4014363 4014435 AACCGAAAGGCTTTGAGTC 58 NA Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 1 2 2 92 2R 4020213 4020233 GCATACATTGAGTTTGGTTCC 57 4020284 4020455 CGACATTACCTTTATTTGACGC 58 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 2 3 3 86 2R 4508172 4508246 GTTACGAAGCCTTCCATTCG 59 4508295 4508313 AGTAGCAGTTCACCTTGGG 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 2 2 4 145 2R 4757940 4758093 CGATGGACACAATGTGACC 58 4759739 4759757 CGTCCATCAGGAGTTCTCC 59 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088642 1 1 2 116 2R 4783044 4783063 CAAAGACGACATCGATAGCA 58 4783141 4783469 TTATCTTGCGTATGGGTCAG 57 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 2 5 5 80 2R 5066160 5066178 GTTGGTTTGAGACATCCGC 59 5066037 5066122 CGTTGATGAGTATCTTATTCACGAG 59 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595 1 1 2 80 2R 5175401 5175480 TAAGCAGGATATTTCCGACCA 59 5175519 5175540 ACTCGAACCTTTAGAGGATGAC 59 NA Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 1 2 2 80 2R 5709901 5709921 GTGGACCTGATCATATTCCTG 58 5709778 5709859 AGATTCAGCATCGTAAGCC 57 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088421 3 1 3 106 2R 6000579 6000598 CACTACATCGCATCATCGAG 58 6000666 6001640 GGCTAAGTAACCGCAATGAC 59 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 1 2 2 80 2R 6208550 6208632 GATCCCTACAGGGAGAAACTG 59 6208674 6208692 AGTTCCGTCCAGGTTAGAC 58 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290090 3 1 2 90 2R 6221201 6221219 TATCCGTATCCGCAATCGT 58 6219864 6221149 TTTCGCTAGGCACAAATAGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 2 2 26 117 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408768 6419548 AGTCGTACTTCAGGTCTTGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 1 5 12 88 2R 6449616 6449635 ACATTATCTTCACCGACCTG 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0113356 1 1 4 80 2R 6731235 6735969 ATTGTACTCAAGTCTCGTCTG 57 6731175 6731194 ACCCAGTTTCATCTTGAAGG 57 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0114570,FBtr0088196 1 3 3 98 2R 7117374 7117455 CTGGGATCCTGCTCTTTCC 59 7117294 7117313 GATTCAAGCAAGGCCTTCAG 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 1 5 5 80 2R 7202397 7202415 GATCCCGATATCCCACTGG 59 7202222 7202357 GATACCGATCATAATCATCAGGG 58 NA Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 3 2 2 228 2R 7413964 7413982 AATGGAGTCCTCGGATGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 3 4 4 80 2R 7531789 7531809 ATTAATTTGCACTCGTGCTCC 59 7531670 7531750 GATCTCCATGAGATTTGGACAG 58 NA Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 1 2 2 87 2R 8034896 8034914 GAAGAGGAGAACCAGGAGG 58 8034689 8034845 TATCCGATTCATCCTCGCC 59 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936 1 1 2 156 2R 8373447 8373465 TCCTTAACTCAGAGGTGCG 59 8373804 8374099 GATGTCAGTCGTAGACTTTCG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 1 3 6 80 2R 8766206 8766566 CAATACCAAGATCCCAACCA 57 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 3 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114539 9114557 CCGTTGAACTCATTGTCCT 57 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 3 12 12 89 2R 9306577 9306659 TGCAAACTCGTACATAATACCG 59 9306509 9306527 CATCACTTCGGAGATGTCG 58 NA Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087700 1 1 2 80 2R 9378987 9379008 GCTCAGTTCTCAATTATAGCCA 58 9377367 9378948 CACGATTGGTATCTTGGTGAG 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 2 5 5 150 2R 9426600 9426618 AGTCAGCCGTCTTAGAGGA 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 3 3 5 75 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 1 3 4 80 2R 10641389 10641506 ATGATCACGAGAAAGCAATGAG 59 10641330 10641350 GATTGTGTTGGATCTCGTTGG 59 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 1 1 2 139 2R 10659038 10659058 CAATACGACCAATTTGTGGAC 57 10659316 10659334 TCTTGGCCTTGGTAATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560 3 1 4 88 2R 10753229 10754997 TAGAGAAACGAACACCAGC 57 10753159 10753177 CGATACATTACCCTGCGAG 57 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 1 4 4 107 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026094 11026112 GATTACATTGGCCTGGGTG 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 3 4 4 80 2R 11344302 11350806 GTTGATATCGAGGAAGAAACGTC 59 11350846 11350864 CTTGAGGAGCATCAGTGGT 59 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112590 1 1 4 95 2R 11304326 11306863 GCCTTCCAAAGGTTCTTCG 59 11306922 11306940 CTAAGGGAACCACCTCGTG 59 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112590 3 1 4 155 2R 11304328 11306865 CTTCCAAAGGTTCTTCGGT 57 11306983 11307002 AACTGCTGTGACTGTAATCC 57 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 2 8 13 90 2R 11835571 11835589 ATCCGCTGCTAACAAACCT 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 2 1 1 76 2R 12979977 12979996 AGCAAGTTCTCTACTCCAGG 58 12980092 12980110 GACATAATCCGGGCAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 3 1 1 77 2R 12979976 12979995 CAGCAAGTTCTCTACTCCAG 57 12980092 12980110 GACATAATCCGGGCAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 3 3 4 85 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311216 13311234 GCAAGCCATTGCTTAGGTC 59 NA Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 2 2 2 80 2R 13320625 13320706 AATCCGAAGAGATCTAGAACCA 58 13320566 13320586 ATTGGACGATGTAGACTCCTG 59 NA Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 3 2 2 155 2R 13394199 13394218 GAATCCGATTTCGATTCCCA 58 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 1 2 2 60 2R 13390421 13390440 AAATCGTACTCTTCTGCCTG 57 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 1 3 3 80 2R 13461764 13461847 AAGAGAACGAGCTTATCTTCC 57 13461887 13461907 TCTTTGAGCACTTGAGAAAGG 58 NA Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 2 1 1 72 2R 13557812 13557830 GGTCTATCAGGAGTGCGTC 59 13557924 13557942 GTACTCAGATCCGACCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 3 3 3 92 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563332 13563424 ACTAATGGCCTGGATTTCGT 59 NA Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 2 1 1 136 2R 14049263 14049283 GAGAAGGATCTGAAGAAGCTG 58 14049457 14049475 AGATCCTCCGATCGTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656 3 1 3 177 2R 14547641 14547659 CTTAAACGAAGGCCACGTC 59 14547427 14547503 TAAATTGAGCTTAAAGGCAGCC 59 NA InUTR Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 1 3 3 80 2R 14882582 14882600 AATGTCACCCTACAACGGT 59 14882641 14884407 CATAATTTGACCTGATGTGGGA 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 2 11 19 82 2R 15360675 15360953 GAAACTTTGCGTGTTGGAC 58 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318,FBtr0086317 3 2 3 85 2R 16143302 16143398 CCCTACAGAATGAGAAACCCT 59 16143237 16143255 AATCAACTTGTCGTCCAGC 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775,FBtr0112776 3 3 4 82 2R 16358011 16358034 GATGAGGATGAGTTCCTAAATCTG 58 16358075 16359055 AACGAGAGGTCTTCTTGCT 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 2 2 4 154 2R 16361412 16361433 GGTAAATGTTATGATGGACGAC 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 1 2 15 80 2R 16908772 16908790 TCGGATCACAGAACCACAG 59 16909015 16910578 CCGTAACAATTGTCTGATGCT 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 3 3 3 80 2R 17172236 17172255 ATCTATCAGATGTGAGCGGA 58 17172297 17172372 GATACATCAGCAGAATGGGC 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 1 8 8 80 2R 17194539 17194558 GCATCACGATCAGTTCATGG 59 17194600 17194687 AGTTTGGGTCGCAATTTCTC 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 2 2 8 126 2R 17186892 17191400 GTGGGAGTGAGAACATAAATCG 59 17191487 17191505 GTAAGATGTCGGCTGTCCA 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 1 2 8 124 2R 17186894 17191401 GGGAGTGAGAACATAAATCGC 59 17191487 17191505 GTAAGATGTCGGCTGTCCA 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 3 2 4 85 2R 17222089 17224945 AGTAATCAGGTCTGGATATCGC 59 17225052 17225070 TCGTTATCGTTGTCTTGCG 58 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315 2 1 5 90 2R 18598036 18598057 AACTGGTCATCATTGGATTCAG 58 18598108 18598174 ACGAAACGAATCCGTTCCT 59 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 2 4 4 138 2R 18693054 18693179 CACTAAAGTTACAGTCAAGTCCAG 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 1 2 2 80 2R 18706464 18706938 ACAACGAAGATTTCTCGGTG 58 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 3 4 13 85 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817835 18817922 TCTTCCAGCAACTCATTGC 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 3 2 4 148 2R 19833771 19833965 ATACCAAACGCCAATCGAC 58 19834154 19834175 TGAAATGTGGATAGCAGTAGTG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 3 2 2 106 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183365 20183441 GCTGGAAAGCCTTTAGGTC 58 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312,FBtr0072313 2 3 3 117 2R 20479589 20479609 TGCTGATCACCATTAAAGACG 58 20479686 20479764 ACATGATCTCTGTACTCGCTC 59 NA Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 3 2 2 100 2R 20579933 20580205 CTTCATTGACACGCACGAC 59 20579851 20579869 AATTCACCACACGGATCGT 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 2 2 6 90 2R 20819715 20819787 GAAGCGATTCATGATCCGC 59 20819643 20819661 CGACTTAAAGAACCAGGCG 59 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 3 2 2 92 2R 20828708 20828726 TGAATTCCCTGGACAACCT 58 20828567 20828652 ATGGAACGGTTCCTTCTCC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 1 2 8 80 2R 20887588 20887609 CAATTTCTAGCCTATGTGGCAG 59 20885212 20885811 CGAGAAGTTAATGAGCACGG 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 2 4 4 178 2R 20981954 20981974 TGGTAAGGAGTTTGGAAAGGA 59 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 3 1 1 62 2R 7754867 7754885 TTGAGTCTGAGGTCGTACG 58 7754984 7755004 CCTCAGAACAAACTTGTTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072464 3 1 9 91 3L 129880 135470 TCTATCAAGATCAACGGTACAC 57 135522 135540 GATGCTACCGTGATTACGG 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 3 3 5 112 3L 234494 234575 GCCAATGGATCTCAAACGG 59 234400 234421 GGTTATAGTAACGGCAGTTGTC 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 3 4 4 80 3L 344411 344429 GGACATTCAGAACTTTGCG 57 344284 344369 CGTAGGAAGAAGGTGTAAGTC 57 NA Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 2 2 2 110 3L 987333 987351 GAACTACGGCACCAATCTG 58 987425 988752 GAACGAACAATCCTTCCGT 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 2 4 4 111 3L 1551789 1551871 CTATGTGGACGAGATCGTCC 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 3 2 4 108 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878549 1881137 ACATTAAAGGCCTCGAATCC 58 NA Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 1 2 2 104 3L 2662262 2662333 ATCTACGTGCCATGTCTGG 59 2662401 2662419 TATTCCGATGATTCCGGGC 59 NA Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123 2 1 2 88 3L 3112558 3112640 TTTGCTCGAGGAAATTCCC 58 3112488 3112506 GGATCGAAAGGTGGTTACG 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073188 1 1 5 80 3L 3723869 3742012 GGTCAAGAGGAGTTTAGAACC 58 3723809 3723827 GTGGATATTGTGCCATTGC 57 NA Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 3 2 2 123 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191881 4192204 CTTGCTCAAGTTTCCTTGC 57 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 2 4 4 64 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775806 5775824 ACCATATGCCATGACCCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 2 3 3 80 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609816 6609835 CGCTTTGAAGATGTCCAGTG 59 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957 3 1 2 83 3L 6710489 6710507 TGAGAGCGTTGAACAGGAG 59 6710040 6710443 AGACCGTAATCGTTCTTGGT 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106 2 6 11 159 3L 7042047 7043665 CTTCTCAATACGCCAACGC 59 7043785 7044352 GATTCTGTACCCTGGATGAGAG 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301109 2 1 11 80 3L 7012987 7027610 GCTAGGATTCAGGATGATGG 57 7027749 7027767 ATTCGCTTCCGTTGAATCC 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 3 6 9 159 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157832 7157852 GGAATCTTATCGTTGTTCTGC 57 NA Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 3 2 2 80 3L 7344759 7344778 AAGTTGACGGCTATATTGGG 57 7344819 7344906 GTTCTCCGTGTACTCTTTCAG 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 3 3 4 92 3L 7506484 7506632 TCGAAATGGATCACGACCA 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 3 2 15 86 3L 7655388 7656366 TGAAATTGATCCGGTTGCA 58 7655320 7655339 TCACTCTCGTCTTCAGTCTG 58 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 3 3 3 80 3L 7759493 7759571 ATGAAGAGCTAAGGCAAACG 58 7759432 7759451 GCAACCATATCCACTGTTGG 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 3 2 2 80 3L 8343180 8343259 CTCCTTCATATGCCTGAGGAG 59 8343300 8343319 TTTGTAGAGATCACGGAGCC 59 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 2 2 4 80 3L 8463411 8463433 AATATGCTTATACCTAGGGAGCC 59 8463470 8463542 GGCCTGTAAATACTGTAGTTGG 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076629 2 1 5 97 3L 8576858 8579081 GCAATTATGTGTCGCTACCT 58 8579141 8579159 ATCCTCTAGCTGGGAATCG 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209 2 1 2 83 3L 8889678 8889696 GAACAGATTGAGGCCAAGC 59 8889436 8889632 TGTTACCATGGTGTTCACCA 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273291,FBtr0273290,FBtr0273286 3 6 7 82 3L 8899798 8899926 AGGACCTGATGGTAATCCG 58 8899734 8899755 CACCTGCAGATAGATAATAGGC 58 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 3 3 4 111 3L 8942372 8942767 GTTACCAAAGGCCAACAGTG 59 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0076526 2 1 5 93 3L 9069977 9069995 TTCGACGCTTTCTTGTCCT 59 9070051 9077595 CGGTGTACAATGATTCCAGC 59 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 3 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089492 1 1 6 80 3L 9338096 9338116 TAACTTTAACCTTCCTGCTGG 58 9338156 9339699 GATCATTCGTTTGGTTCAACG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 1 5 5 80 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408556 9410759 GCATGAATTATCTCGGCCA 58 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 1 4 4 80 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463531 9463673 CATCCTTCGTGTAGATTTCCG 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 2 4 4 80 3L 9463472 9463490 GACGTTTACGCTCTTCTGC 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0301858 1 1 3 155 3L 9730319 9730337 TCTCATCGAGCAACTGGAG 59 9729084 9730039 AATTGTAGTCTGGACAAACCC 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 7 8 100 3L 9817650 9817671 GAAGTCGACGATCAAATAACGA 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076312 3 1 2 104 3L 10092788 10092806 ACTTATTTGGCCGAACTCC 57 10091119 10092720 CAAACTTATCGTTCGCCGA 58 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 1 2 3 118 3L 10681693 10681792 TAGAGCTTTGGGACAAGGA 57 10681874 10682037 TATTGTTGAAGGCTGCCAC 58 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 3 3 3 99 3L 11051886 11051904 TGGAATGACTATGTGGCCA 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 2 4 4 80 3L 11520327 11520346 TGATCTCAAAGCCCTAGTGG 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 1 3 6 102 3L 11811258 11811276 CATTCTACTGCGTGCAGAG 58 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0301135,FBtr0076079,FBtr0076078,FBtr0110869,FBtr0110868,FBtr0302136 3 6 6 97 3L 11811405 11811423 ATTGGCCAGGGAAGTTCTC 59 11811260 11811278 CTGCACGCAGTAGAATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 2 2 3 80 3L 12406595 12406613 AGGATCGATATCCACGACC 58 12405542 12406552 CTGCTGAAGGAATTTCTCCG 59 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913 1 1 2 138 3L 12731792 12731878 AGATTCTTTGAGCAGGGCA 59 12731978 12731998 CTTATGTCGGTTCTTGTAGGC 58 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354 1 1 2 170 3L 12747711 12747788 CTAAGCTTGCAGAATGTTCTG 57 12747236 12747254 CAAGATCACCAAAGCTGCT 58 NA Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 2 1 1 69 3L 12768690 12768708 ATCACAGCAGAACGAAGGA 59 12768585 12768603 TTCAGTGCTGCTCATACGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 3 2 2 118 3L 13501536 13501555 CATTACGAATAACTCCGGCG 59 13501634 13502158 CTATTTGAGCAATGGGAAGGG 59 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 2 4 4 84 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901998 13902016 CAACACTTCTCGCAGAGTC 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422,FBtr0273427 3 2 7 80 3L 14500764 14500782 AAGGTACGAAGGATGTTCG 57 14410284 14500721 GGGTACCAAGATCTGATTCG 57 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 3 3 3 80 3L 14620526 14620544 GCTATGTGACCTTTGGAGC 58 14620588 14620666 GCCATGGAGTCAAATCACC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075703 3 1 9 137 3L 14753769 14753790 AGTTCGTCTATCGGTAATTGTC 58 14750420 14753672 CTTTCTCGAAATTGCCTGTG 57 NA InUTR Drosophila melanogaster 61 bmm FBgn0036449 FBtr0300190 2 1 2 90 3L 14770500 14770518 AGGCTCTGTCGAAGATCAC 59 14770075 14770449 GATGAAGAAGTCTGATTCGACG 59 NA Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 1 1 1 73 3L 15520845 15520863 CTATTGGCTACGCATTCGA 57 15520561 15520579 GAGGTAGCCAGGTAACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075566 1 1 2 121 3L 15576972 15577395 ATCATCATGCGACGATACG 58 15577480 15577498 AAGTCTTGCCACAAACACC 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075569 3 1 4 90 3L 15598299 15598317 GGTCTACTAAGACCACCGC 59 15598371 15599767 TGTTGCCAACCGAATTGAC 59 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075576 1 1 2 108 3L 15671630 15672919 GAAGGACCAGATCTGAGCA 58 15672989 15673009 CGATTTCCCAAGATGGAACAC 59 NA Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 3 1 1 76 3L 16475782 16475800 GCATCCTCTACCAAGTGGG 59 16465418 16465438 ATCGATCTTGGAACAAACTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 2 1 1 83 3L 16719216 16719238 TACTTACCCTCATCATGAAGAGC 59 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 3 5 7 81 3L 16952971 16954604 TCAGGAGCTACCAGATTCG 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 3 3 3 80 3L 17035131 17035212 GAACAAGCTCTGCTAAAGCA 58 17035070 17035088 CGGATGTTGCATGTAGTGG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 2 3 4 144 3L 17071247 17071266 GTGGTAGACAAAGTTTGCGA 58 17067480 17070734 TGATGTTATCGTATGCAGAACG 59 NA Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 2 2 2 84 3L 17847366 17847454 TCGAATACGCAATTGGCTC 58 17847300 17847318 AAACTGCTCATCGGATTGC 58 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242 1 1 2 82 3L 18480285 18480524 ACATTTATCTTTCTGGCCGTC 58 18480223 18480241 AAGGCGTACAGTATTGGGT 58 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 1 2 4 142 3L 18668068 18668327 CCATACCAGATGAGCCTGG 59 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 1 3 3 85 3L 19252662 19253226 CCATTCTGGCAGGTTATCC 58 19252595 19252614 AAAGAACATGTGATGCACTG 57 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 3 3 3 85 3L 19252660 19253224 ATTCTGGCAGGTTATCCGG 59 19252593 19252612 GCAAAGAACATGTGATGCAC 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 3 3 6 116 3L 19685465 19686090 GTGTACAGATGTACCAAGTCG 58 19685369 19685387 TTTCTCGTCGCAATTGGTC 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302712 3 2 5 171 3L 20150312 20151587 CCAATGTGACTGAGAAGGG 57 20150159 20150177 GTCGTGGTTTCATCGAGAG 58 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 2 5 5 145 3L 20381816 20381834 GTCTACTTCGAGCCCAAGG 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304 2 1 4 81 3L 21208198 21208679 AACCGATTCACTGAAAGCC 58 21208724 21208742 AGGTCCTTGAGTGATCTGC 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 2 3 3 81 3L 21257019 21257037 AATGAGGCGACATTGACAC 58 21257079 21257158 TGACAAAGTCAGAATCGTAGAG 58 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 1 2 3 170 3L 22262797 22262815 TACTTCGTGGTCACTTCAC 57 22263010 22264666 AACGTCCTCATTCAGATGTG 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0078565 3 1 2 82 3L 23017256 23022942 GCGCCAGGATAAATTACACG 59 23022982 23023005 GAAATGGTAGATTCTCATACTCGC 59 NA Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 2 2 2 90 3L 23332715 23332734 GATGTCACTTGGAATCGCAC 59 23334563 23334581 AATAATCCCTCACAGGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 1 4 4 115 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952 1 1 4 83 3R 163060 165102 GATACCACGACCAGAAAGC 58 162995 163013 GTGCGATGACTTCGTAGTG 58 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 3 5 5 84 3R 452847 452870 CGATTGACTGGTATAAAGATAGCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 10 10 91 3R 561270 561374 GATCTGCATGTGAAATACGAG 57 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078601 2 1 2 116 3R 2091005 2091026 GCCAAGTAACAAACTATTGGCA 59 2091103 2092140 TCAGAGCCTAGACAGTCCA 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 2 4 4 81 3R 2182250 2182268 GTGGTTCGACAACACTACC 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735 2 1 2 116 3R 2190440 2190736 AGAAAGAGCAGCCACTAGC 59 2190342 2190361 GGAATAGACCGTCGAGAGTG 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 1 4 4 83 3R 2212398 2212480 TGACGATGAGAACGCTCTG 59 2212526 2212545 CGATCAAAGGGATTGATGCG 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 3 4 4 88 3R 2211841 2211860 CAACAAGTACGACACCTGTG 59 2211910 2212066 TGTGATAGGGATGTGAGCAG 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081672 3 2 3 83 3R 2308885 2315357 CTTACTACGATACTGAATTGGACAG 59 2315398 2315416 TATTAATGGTGCGCAGCCT 59 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081684 3 2 4 143 3R 2480254 2480272 GAAGACGAGAACAATGCGG 59 2480377 2480941 CATGGATTCATCTGCCATCTG 59 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081685 1 2 4 119 3R 2480796 2480942 GCAGCAAGATGAATCCATGG 59 2481024 2481042 AAGTTGGTGAAAGCACCCT 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276 1 1 4 89 3R 2565312 2565331 AGTATCCCTGGATGAAGGAG 58 2537658 2552945 CTGGAACGAATTCAGTAATGG 57 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 1 2 2 79 3R 2579786 2579807 CCTTCCGAGGTTAAATACAGTG 58 2579664 2579682 TTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0113200,FBtr0081612,FBtr0081614,FBtr0300493 3 5 9 185 3R 2924199 2924288 AGCACTTTGACATTGCCTC 58 2924032 2924050 CTTACTTACCATGCGCCTC 58 NA Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 2 1 1 241 3R 3737418 3737436 AACCGTTGCGTAAATCAGC 59 3737118 3737136 CAATGTCCATTTGGGTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 2 2 3 199 3R 3785499 3785519 ATCTCAGTTTCCGTCAATCGA 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 1 2 3 80 3R 4542277 4542622 AAGCAGTGGAAGAGTCCAG 59 4542666 4542684 GTGTTTCGGCTTCTCTACG 58 NA InUTR Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986 2 1 2 175 3R 5066800 5066882 GCTTTCAACTATGGTGCCC 59 5066643 5066661 ATCAGCAGATCCGTGATGG 59 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 1 3 3 81 3R 5161906 5161925 CTGTTCTCGCTTATCATGGC 59 5161969 5162217 TCCTCTCGTATTCCTTGCG 59 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 2 3 3 81 3R 5161908 5161926 GTTCTCGCTTATCATGGCG 59 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 2 3 3 96 3R 5284386 5284404 ATCAGCCTGATCAAATCCG 57 5284247 5284327 TGTGTCCATCAATCTGTAGG 57 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 3 3 3 91 3R 5399132 5399150 TGTACAACGGGATGATTGG 57 5398995 5399078 GAATATCGTCTTGGGACCAG 57 NA Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 3 2 2 81 3R 6030866 6030884 CCTTCGCAAATCGGATACC 58 6030696 6030822 TTCGGATGTAGCCTTGTAGG 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 1 2 8 92 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359651 6359669 CTGAGGAATACAATCGCCG 58 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0302571 3 1 4 104 3R 6589659 6589840 TTCAAATGCATACAGGCCAG 59 6589907 6589925 TCGATGGGCTAACCATCTG 59 NA Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808 2 1 2 134 3R 6871150 6871168 ATGCGAAATTCTCACGTCC 58 6871263 6872117 GTTTATATTCGCCATCAACCTC 57 NA Drosophila melanogaster 61 KP78a FBgn0026064 FBtr0301426 1 1 1 100 3R 7178776 7178796 GAGTGGATTAACGCTAATTCG 57 7176846 7176864 ATTCGGTTTCCTTCGTCAG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 1 2 3 80 3R 7866598 7866617 CATGTGTTGTTGCCTAACCA 59 7866658 7866737 CGAAGACCTTTCCTAAGACGA 59 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 1 1 1 60 3R 8049043 8049063 GTTCTTCAGAGATTCTTCCGC 59 8049172 8049190 GGTCTACGATTGGCTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 2 5 5 82 3R 8845522 8845623 GAAATACACGAGAAGGTCCTC 58 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889 3 1 2 187 3R 9916528 9916546 TAGCTTCCAAGAGCTACGC 59 9917115 9917540 TTCGATTTGGATTTCGGGC 58 NA InUTR Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 2 5 5 80 3R 10090933 10090955 GATAACCTTGTAGTTGATGCCAC 59 10090815 10090894 CGAATAGCAATTCGGCTCAC 59 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 2 3 3 98 3R 10142500 10142518 GCCGTTTGATGAAGGTCAC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 2 3 3 91 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551642 10551772 CAGATGTTGATCGTCTCATTGG 59 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 1 2 3 80 3R 11240682 11240830 GCCGTAGTAATTACCCTCCA 59 11240873 11240891 CTGTTATCAACGGCTGACC 58 NA Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 2 1 1 87 3R 11659805 11659826 GAAATGGACAATGATGAACAGG 58 11659638 11659656 CGTATATTGCGGGCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 2 1 1 89 3R 11672784 11672802 ATCTCGAAACTGGAGCAGG 59 11672919 11672937 GTAGCCCTCAGTAGTGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 1 5 5 111 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377352 12377370 GAAGCGGATACATTGACGC 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 3 2 2 81 3R 13557696 13557719 CTGGATTTACTCGATGCTTATGTC 59 13557759 13557845 CATCGGAAGGCAAATGCTC 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 3 3 7 83 3R 13995812 13997262 AGCAGTTTGGCTAACAAACTC 59 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 2 5 5 104 3R 14751506 14751633 GAATGATGATCGGTTCGAGG 58 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301693 1 1 3 80 3R 15061294 15062559 GAACCCAGATGGTCATATCC 57 15061233 15061253 AGTTCTGTGATTCTCGAAAGG 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 3 4 7 98 3R 15600337 15600355 TGTTATATCGCGGATCACC 57 15600416 15600648 TAGAAGGTCTCATCCTCCTC 57 NA Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 1 2 2 80 3R 16965291 16965420 GGTATTTACAGGTGAGGCCA 59 16965461 16965481 GCTATCAGCGATAAATGGGTC 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 1 3 16 93 3R 17010984 17011004 TTGATGTGCAATCCTTACCAG 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 2 2 2 126 3R 18313105 18313241 GTTCGAGCAGGAGATTACCA 59 18313330 18313348 CAGGATCTGACGGTTCTCC 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 3 5 5 80 3R 18430299 18430377 CAGCAGCTTTAAGAAGACTCC 59 18430417 18430437 AAATACAGCACAAGATCACGC 59 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 3 2 3 104 3R 19350705 19351229 AGATCTCTGCGGAAAGAGC 59 19350619 19350638 ACTATAGTAGCCTCCTCGCT 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 1 2 4 173 3R 19453174 19457217 AGAGCCAAAGCTATCGACC 59 19453019 19453037 CGTCGATATCAGCAGTCGA 59 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 1 4 4 80 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556384 19556402 GTTATTCTGTAGGCGCAGC 59 NA Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 3 2 2 110 3R 19585009 19585091 CTCATGATGAAGAACGGATGG 58 19585163 19585181 GTAGAATAACCGGAGGGCA 58 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 2 3 3 104 3R 19631552 19631570 CCATATTGCCGGACATAGC 58 19627948 19631484 ATCAGAGCGTCAAGACCTG 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 3 4 7 193 3R 19985468 19985486 CACAGGCGTCATAAATCGC 59 19985036 19985204 CCGTTATACGGGTAATGGGT 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 3 4 7 114 3R 19985036 19985205 TACCCATTACCCGTATAACGG 59 19984884 19984902 TTTCGATACAGCTTGAGCG 58 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 3 4 4 111 3R 20172701 20172813 CAGAACTACAACTCGACGG 58 20172608 20172626 CGGTAGCATTGTAGTCCAC 58 NA Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 1 2 2 88 3R 20358517 20358594 CAACCGATGCTAACATTATACC 57 20358642 20358661 CATTTCTTCCATTGCATCGT 57 NA InUTR Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111012 2 1 2 105 3R 20417049 20417067 GTCGTAGCAGCGATAATGC 59 20417133 20441783 TCGCGATTTATATTGAGCATCC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0100637 3 3 18 140 3R 20508114 20512919 GGGCGAAGACATATTGTGG 58 20515047 20515065 AAGTTCCAAATCGGGTGGT 59 NA Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084686,FBtr0084687 3 2 2 105 3R 20541279 20541297 AAGTACGAGAAGCCCACTG 59 20541476 20541494 GTACCGTGTAAATGGGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089983 1 1 6 97 3R 21182015 21182033 CAATGGCCCTTCATGTCTG 58 21181791 21181954 AGAGCATGGCCCATATAGC 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 3 2 5 146 3R 21711422 21711441 ATGCTGCTGATAGTCTACGG 59 21711547 21711618 CGCTGTGAAATACAGATTTGGT 59 NA Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084977 1 1 2 80 3R 21877630 21877708 AAGGAGATATCACATCTCGAGTC 59 21877572 21877591 CATGGTGGCCAGAATATTGC 59 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 1 3 3 85 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 1 3 3 80 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765495 TCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0085287 2 2 3 114 3R 24166356 24166374 GTGTGATATTCCACCGGGT 59 24166452 24167103 AAGCTCTCATCCTCGAACG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085298 2 1 6 100 3R 24425714 24426439 AGCAAGATGACTTTCCTCAG 57 24426502 24426520 CTTTAGGTTCTCGTCGGTG 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 3 5 10 180 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24961001 24961025 CTGGAAGAAGATTATAAACACGGAC 60 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085443 3 1 5 104 3R 25423028 25423046 GACATCGAAGGTCTTCCAC 58 25423186 25423506 TGCATACAGTTCACATGGT 57 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301745 2 1 2 140 3R 25662427 25662449 GATACCTCAACTTTATGACCGAG 58 25662549 25662623 TCGTCGATGGTTTCTTGCT 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 2 4 6 80 3R 25723359 25727915 AAGGAAATGAACGGACTGC 58 25727958 25727977 GAACTCTTGGATCGATTCGT 57 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 2 4 5 82 3R 25857056 25857153 GCCATCTACAGATTCTTGCG 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG7950 FBgn0260468 FBtr0085564 3 1 2 76 3R 25882731 25882751 GGTTACCAATATCTGGACGTG 58 25882870 25882888 GTCACGGAGTCTGGATCAC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 1 2 2 81 3R 26021094 26021180 GTTTCAGAAGAGATTCTATGTCCTG 59 26021037 26021055 CCCAAAGTACTGGAACGGA 59 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 3 3 3 77 3R 26214988 26215009 CCAAGGATGATGAATATTGCCA 59 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 1 6 12 139 3R 26359221 26397540 ATCACTGAGACTTCTGCCA 58 26397642 26397661 AGTATGGTTATCTCCTCGGG 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960 1 1 4 80 3R 27004474 27006766 CGAATGTCTACGACATGAGG 58 27004413 27004431 CAGGGAATCAGGATGAGCA 59 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 3 3 4 81 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 3 5 5 82 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427004 27427022 GCTCGTACCACATCTTCAG 58 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 2 4 4 114 3R 27567455 27567473 CAACGTGAAGAACGTGTCC 59 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342 3 1 4 90 3R 12579456 12579480 CACTCCAGGATACCAAATATTACAC 59 12570424 12579408 TGATAATGTGCTCAACGCG 59 NA Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 3 2 2 163 3R 12677052 12677070 TTCCTATCGCCACTCACTG 59 12677196 12681549 TATGGATGTCCTTGGTCCAG 58 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089114 2 1 3 169 4 231301 232283 TGATCAAATCGTTTACCGCA 58 232415 232492 AATCATCTTGATCGCTGCC 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300556 1 1 6 134 4 350044 363557 GCAAACACAAATACGAGTGGT 59 349930 349948 GAAGACGTTTCCGAAAGGC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 3 6 7 83 4 470582 470875 TAAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0089793,FBtr0301341 2 3 3 80 4 757663 758372 AGAAACTAAGGAGGAGAAGCA 58 758413 758432 CGAATCACTTCGATCTTGGG 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 1 6 6 100 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974433 974453 CTGAAGTAGGAGTAAATGCCA 57 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 3 2 5 140 4 1042977 1042997 TTCTGCACTCTGCATTTACTC 58 1040631 1042878 GTTTGCAGTTTCGTTAGAACAC 59 NA Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 1 2 2 64 4 1052526 1052544 TACGTGCTGCATCTAAAGC 58 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 1 2 2 81 4 1137189 1137210 TCATATTCCCTTCTGCATACCA 59 1137071 1137147 GTGACCCTTCAGCTTTGTG 59 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 3 2 4 195 4 1207177 1207198 TCTTTCGGAAATGGATTACCCT 59 1208237 1208379 CCTTCTCAGGTATTGTAGATCGA 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100582 1 1 8 80 X 167261 167281 GAGCTTTCAAATCCTCCTACC 58 165894 167222 CTCGATAACAATCAGATTGCTG 57 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 2 4 8 80 X 165640 166467 CAGCGATGTTGATTACACCA 58 165579 165599 TTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 1 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070126 2 1 8 85 X 550513 551140 TCATCGTAAGGAAAGCCCA 58 551189 551207 TTGGCGATCTGGATATCCG 59 NA InUTR Drosophila melanogaster 61 sdk FBgn0021764 FBtr0070131 2 1 6 94 X 640329 640562 ATTTGTTTACGACTCACGCTG 59 640618 640636 TGGAGGGCATCAGTATGTG 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 2 5 6 87 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640607 640627 TCAGTATGTGATAGCTGACCG 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 1 5 6 86 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640606 640626 CAGTATGTGATAGCTGACCGT 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070176 3 1 3 101 X 935426 936303 AAGATTGACAGATACGATGTGC 59 936365 936383 CTCGGCACTCAAGTACTCC 59 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 3 1 1 193 X 1562842 1562860 CGCCTACAAGATGACAAGC 59 1562604 1562622 CAGTGTTAAGCACAGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 2 4 5 88 X 1787492 1787510 CATATGAGGGCCTGTACGG 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 2 2 3 97 X 1924315 1924334 CCAAAGACAATCCTCTGGAG 58 1923949 1924258 GTTGATCAAATCATCTGGATCC 57 NA Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 1 1 2 124 X 2101597 2101615 GATGACCAAGCACTTTGCC 59 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 1 1 1 60 X 2842144 2842162 AGTGGGAGTACTAGCTGGA 59 2842255 2842273 ACGACCAATTCCTGATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 tlk FBgn0086899 FBtr0112680 2 1 8 86 X 3641434 3643084 ACTTGTGTCCTCATCAATTCAG 58 3656533 3656552 AATGTTGTTGATAGCTGGGC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 3 4 4 98 X 3846169 3846187 CTGAGAGTCTGGACTTGCT 58 3846246 3846812 GTGTGATTTGATCCTTCAAGTG 58 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 1 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015955 4016107 TCTAGCTGTCGAGTAGTCGT 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 3 3 3 86 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037707 4037725 TTACCTCGCACATTACCAC 57 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 1 2 5 83 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247639 4247987 TCTAGCCAGATCTTGGCTG 58 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 2 3 3 130 X 4554209 4554299 CACAGATCGTGGTGATATCCA 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 2 6 6 80 X 4847072 4847093 ATCAAGGTGCAGTTGATTATCG 59 4847134 4847209 CGATTCGCAGTTCCTTGAG 59 NA Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 2 2 2 80 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997042 5997061 ATTCCGCCGTAATTCAAGGA 59 NA Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 2 2 2 60 X 6484257 6484277 ACTAGCCCATATCATCTTGCA 59 6484361 6484382 GCTGCCTTGATTCATATTATCC 57 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 3 4 21 82 X 6986733 6986757 CGTCCTACTATAACTTTAAGATGGC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 3 1 2 118 X 8353409 8354810 ACATCAGTTGTGGCATGAC 58 8353309 8353327 CAGGCTCAATGGATCTGTG 58 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 3 3 3 81 X 9232369 9232388 TCACCTGTAAGTTCTATCGC 57 9232242 9232326 CAGTGATGATCGAAGGTCTC 57 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 1 2 4 80 X 10120393 10120556 TGACCACCTATGATAATGCCC 59 10120598 10120616 TCTTCCACGACGAGATCAG 58 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 2 2 2 82 X 10674283 10674302 CAACTTGGCCAACGTAATCC 59 10674144 10674241 CGAGGAATACCGATTTGTACAC 59 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 3 2 2 150 X 10842532 10842550 AATCCAGAGTGCAGTCACC 59 10842664 10854646 CTTCGATTGTGACTTGCGG 59 NA Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 1 2 2 80 X 11040019 11040038 GATATCAAGGATCGCAAGGT 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 2 4 15 137 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299407 11299430 GGATACTCTGATATAAGGTCATCG 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0073488 2 2 15 81 X 11277074 11277093 AATAATGTGAGTGCCCAAGC 59 11277137 11281814 TGCGCTGATTCAAGATCTC 58 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073567 1 1 2 80 X 11763310 11763330 CCCATACGAAAGGAGATCCTC 59 11763370 11763532 TTGAAAGTGGAACTTCACCCT 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114452 1 1 2 86 X 11777190 11777211 CGTCTGTTAAGAACTAGTAGCA 57 11775927 11777146 TCTGTATGTCCTTGATTTCCAC 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 2 5 7 80 X 12090590 12090609 CTGAAGTACGAGGAGAAGGG 59 12090647 12091232 GCTGAGAATATAATCCTTCTGCAG 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 3 4 4 75 X 13100773 13100791 CTCCGATTTCGACGATGAC 58 13098155 13098173 AACGGCTGTGTTCAAATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 2 2 2 80 X 13582343 13582362 GATACTGCAGTCCATTCTGG 58 13582186 13582300 CTGTAGCCACAAACTTCCA 57 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 2 2 2 126 X 14127233 14127251 ACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0073993 1 1 2 90 X 14989268 14991682 CTAAACTCCTTGAGACTTCCC 57 14991734 14991752 AACTAATCGTTCCTTGGGC 57 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0073993 2 1 2 91 X 14989267 14991681 CCTAAACTCCTTGAGACTTCC 57 14991734 14991752 AACTAATCGTTCCTTGGGC 57 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 1 3 3 83 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 3 1 1 61 X 15627746 15627764 ATACACTGCAGTAAGCCAG 57 15627546 15627564 AGAGGAATGCTATTCGTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 2 5 5 165 X 15688454 15688537 GATCCACGTAACAAAGTTCCA 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 3 5 9 135 X 15714505 15714523 GAGAACCAGGAAGCAAGTC 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 3 4 4 87 X 15769161 15769180 CAGCTAGATTTAGGCGATGG 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 2 5 5 83 X 16178783 16179061 CGACTACGTAGGCTATGCA 59 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 2 6 9 187 X 16270360 16270691 AACAGTGGTATCTGAATGGC 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 1 1 1 67 X 17102641 17102660 TAGTACGTGGTCATGCTGTG 59 17102751 17102769 GATGTGTATGGGTGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 3 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0074491 2 1 3 96 X 17461877 17461895 TTCTCCTCCTGCATGAAGC 59 17461724 17461820 ACATAGGCACATTAGGTATGGG 59 NA Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 2 1 1 61 X 17484483 17484501 GGAGGACACTGTGAAACAG 58 17484583 17484601 ATGGATTCCTTCGATTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0112999 1 1 2 80 X 17938906 17938927 GTTTCTCAAACAACATCTGGAC 58 17938963 17939065 CCAGGTCTATCAATTTCCATATCC 59 NA Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 2 1 1 72 X 18660269 18660287 ATTGATACCCACCAGTCGA 58 18660153 18660171 GAAGAGCTCGTATCCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 2 2 4 232 X 18691377 18691395 TCTAAACCAACGTTAGCCG 57 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089397 3 1 13 198 X 20101685 20104511 CTACGGATTATTATGTGCTTGC 57 20101130 20101527 TCGTTGACCTCCTTCTTCAC 59 NA DesignRelaxed Drosophila melanogaster 61 sw FBgn0003654 FBtr0089398 3 1 13 81 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101660 20104507 TTCGTCGTCTCCATAATAATCC 57 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 2 2 8 84 X 21251053 21251071 GAAGTCCAGCTTCTACGGA 58 21251119 21251693 GCCAAAGGATCTTAGCCTC 58 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 3 2 5 148 X 21886355 21887250 TGGGCAATAAATATGTCGAGC 58 21887359 21887378 GATCAGGGTGTCTCTGATGG 59 NA Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 3 1 1 120 X 21941651 21941669 GACATCAACCTACTGCCCT 59 21940529 21940547 GTTTATGCTCCGGATCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300634 1 1 2 60 X 7793168 7793188 CGTCTGTGTATTCTTATGTGC 57 7792929 7792950 GAGTGTATCTTCTTCAGGAGAC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 1 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 tRNA:CR31631 FBgn0051631 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C3420a FBgn0083988 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:660 FBgn0065059 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-281bS FBgn0067710 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32456 FBgn0052456 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-U1356b FBgn0082948 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31215 FBgn0051215 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:G FBgn0013694 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:T FBgn0013707 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 kl-2 FBgn0001313 FBtr0300022 3 1 1 101 YHet 82961 82982 GACGTGTTAGCAATATTCTTCG 58 83040 122073 CGATGGGCATATCTTCTATTACC 58 NA Drosophila melanogaster 61 CR32660 FBgn0052660 FBtr0073592 2 1 1 80 X 11814605 11814697 AAAGTAGGGATGATGACAACTG 58 11814546 11814565 GGTACATGGATTTGACAGCT 58 NA Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077359 2 1 2 162 X 21942404 21942600 GGATATTTATCGTTTCGGTCGG 59 21942785 21942803 ACATAGCCGCTAGCTTCTC 59 NA InUTR Drosophila melanogaster 61 CG10918 FBgn0031178 FBtr0077218 1 1 1 60 X 21299821 21299839 CAGCTCCACTGATAGCTCC 59 21299779 21299797 ATCGGTAGAGCTATCGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074816 1 1 3 96 X 19635196 19638307 CGTAACAACAAAGCAGCGA 59 19635118 19635136 TTCTGGTTAGGGAACCGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14215 FBgn0031052 FBtr0074746 3 1 1 81 X 19548334 19548489 CGCCACATTCTCTAAGATTGC 59 19548532 19548550 GTCGTTAAGCAAAGCTCCG 59 NA Drosophila melanogaster 61 CG14212 FBgn0031045 FBtr0074742 3 1 1 91 X 19520376 19520396 CGATAGTTGCAACGATCTGTG 59 19520449 19520467 TCATCTTACCGTGCAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 1 2 2 80 X 19177437 19177456 CGTACCACAATCAAGAAGCG 59 19177213 19177396 TTGCTCAGCCATAATTGAACG 59 NA Drosophila melanogaster 61 CG32536 FBgn0052536 FBtr0074686 1 1 1 166 X 19169553 19170519 CTTCTTCAGTGAGCTGACG 58 19169345 19169363 TATCATCCACCCAGTCCTC 57 NA Drosophila melanogaster 61 CG33253 FBgn0030992 FBtr0074668 2 1 1 124 X 19080126 19080144 CACCAGGAATCTGTCCGAG 59 19080231 19080321 ATACGTCCTTGATCTCCACG 59 NA Drosophila melanogaster 61 CG34329 FBgn0085358 FBtr0112531 3 1 1 67 X 18944765 18944783 TCACTGGAAACTATGGCGA 58 18944812 18944832 GGTGCTTATCAAGTTGATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7058 FBgn0030961 FBtr0301153 2 1 1 80 X 18702490 18702574 GATACGACTCAAGAAGTTTGTGG 59 18702612 18702632 GGATTGATGCACTGTATGACC 59 NA Drosophila melanogaster 61 CG15043 FBgn0030929 FBtr0074626 3 1 1 169 X 18387988 18388006 ATATCCATGTCTTTGCCGC 58 18387764 18387783 TGGGAATTCGTAAGTGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300205 2 1 9 80 X 18266413 18266433 CCAACTGCAACATACAATACC 57 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 2 1 7 178 X 18007407 18007490 AGAAACTCAGGTTGCTGCT 59 18006028 18006050 CAGTATCTTACTGTGGTAGTCCT 58 NA Drosophila melanogaster 61 Ucp4A FBgn0030872 FBtr0074464 3 1 1 130 X 17739671 17739689 TTACATCGTTTCCGTGGTG 58 17739780 17740725 GGTATTGCATATTGGACTTTCC 57 NA Drosophila melanogaster 61 CG12432 FBgn0030843 FBtr0074433 2 1 1 111 X 17428187 17428209 TGGAGACATCACCATATCATCTC 59 17428041 17428116 TCATGATGCAGGTGGACAG 59 NA Drosophila melanogaster 61 B-H2 FBgn0004854 FBtr0074429 2 1 1 254 X 17215116 17216701 GAATCGCAGAACCAAATGGA 59 17216918 17216936 TGATACATGCGGTACGAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443,FBtr0074441,FBtr0074442 1 3 3 82 X 17182011 17182029 CATCCAGGATTGGACAAGC 58 17181555 17181966 CAATTGCGGTAGGTCTTCTC 58 NA Drosophila melanogaster 61 CG13012 FBgn0030769 FBtr0290216 2 1 1 119 X 16563465 16564098 AGGACTCGATTACCAAGGTG 59 16563365 16563383 ATACCATGGACACGAGGAC 58 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 3 2 2 114 X 16554496 16554581 CAGTTTCAAGCACAAGATGGA 59 16554657 16554675 ATTAACTCCGTGTTCGGCA 59 NA Drosophila melanogaster 61 rok FBgn0026181 FBtr0074286 3 1 1 84 X 16520823 16520907 TACGAATGCAAGAGATGCC 58 16520757 16520775 CGTGATTGAGCTTACAGGG 58 NA Drosophila melanogaster 61 CG34015 FBgn0054015 FBtr0100070 3 1 1 117 X 16341988 16342074 CGATTCTTTGGTGCAGCTC 59 16341889 16341908 ATGCTTCACCGTGATAAACG 59 NA Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 3 1 1 66 X 15660250 15660343 AGATAATCGCATAGTGTCCG 57 15660203 15660221 CTTCAGTATGACCTGCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17209 FBgn0030687 FBtr0300811 1 1 1 80 X 15662004 15662092 TCAAATTGGATGTTCGGAACC 59 15662133 15662152 CGATACACTTCTCGTAGCGT 59 NA Drosophila melanogaster 61 CG9072 FBgn0030614 FBtr0074029 1 1 1 60 X 14989853 14989872 CAACTGATTGTCTATCGGGC 58 14989812 14989834 GATCATAGTGATCCTTCTGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 1 2 2 82 X 14925029 14925047 TCTCAAGCGGATCAAGGAG 59 14925092 14925220 CGATGCGGAGATTTATTCCA 58 NA Drosophila melanogaster 61 CG9518 FBgn0030590 FBtr0073983 2 1 1 184 X 14760497 14765029 GAATCGCAATTGGCCTACG 59 14760331 14760352 GCTTCTTTGAACAAGAATTCCG 58 NA InUTR Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943,FBtr0073944 3 2 2 82 X 14484958 14484976 GAACCACGTTGTTCACCTC 59 14482756 14484291 TTCCAGACCCTATCATAGTTCC 58 NA Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 1 2 2 80 X 13608753 13608860 TGTCAGATTACTCAAGCGAC 57 13608902 13608921 GATCGGATGTCGTTATCGAG 58 NA Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443,FBtr0073803 1 2 2 80 X 13471639 13471657 CATGCCTCTTCAAGGTGGA 59 13471695 13474109 GATTGTCATCTGTGAGGTATTTCTC 59 NA Drosophila melanogaster 61 CG12725 FBgn0030483 FBtr0073788 1 1 1 60 X 13296721 13296744 CGTAAGATGCAAGTTCTAGTTCAG 59 13296684 13296703 GATCCACATCGTAAACCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt12 FBgn0261085 FBtr0073767 2 1 1 80 X 13259457 13259475 GAATCTCAAGCTGGACGGT 59 13259515 13259618 ATCAGGTAGACCTTAACGAAGAC 59 NA Drosophila melanogaster 61 CG15743 FBgn0030465 FBtr0073755 3 1 1 89 X 13180833 13180851 ACAGATACCGGATGTGACC 58 13180903 13180998 TATAGCTCCTCGGTGAACTC 58 NA Drosophila melanogaster 61 CG2200 FBgn0030447 FBtr0073721 2 1 1 119 X 12988697 12988815 TCTTCAAGAGTGCCAATGTG 58 12988897 12988915 GTCCCTCCACATTGAATCC 57 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 1 4 4 97 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910897 ACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 gd FBgn0000808 FBtr0073583 1 1 1 80 X 11880504 11880522 CCCGACTTTAACAGTCAGC 58 11880320 11880462 GGTGTTAAATCGAACTTCGTC 57 NA Drosophila melanogaster 61 CG10352 FBgn0030348 FBtr0073599 1 1 1 80 X 11769957 11770039 AGGGTGAAATCATAGGACCTG 59 11769897 11769915 GTTTGCCCAAGGTTATGGG 59 NA Drosophila melanogaster 61 CG1578 FBgn0030336 FBtr0073607 3 1 1 80 X 11704491 11704578 ACGATCGATTCGATTATGAGG 57 11704431 11704449 TCTCGTAATTCCATCGTCG 57 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 3 6 6 174 X 11688876 11688897 CAATGGTTAAGACCTATTGCCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299514 2 1 2 86 X 11001883 11001901 GTCGTCATGGAGTACCTGG 59 11001950 11002027 GTCGAAAGGACCAAACTCTG 58 NA Drosophila melanogaster 61 CG32669 FBgn0052669 FBtr0073412 3 1 1 60 X 10738686 10738706 AATCTGTCGTATGTGTTGTCC 58 10738646 10738667 GATAGAAGACCGGAATGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 1 4 4 116 X 10676325 10676422 GTACAAGCAGGTCTTCCTG 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Yp1 FBgn0004045 FBtr0071419 1 1 1 80 X 9948098 9948117 TCGACGATTTCACCATTGAG 58 9948160 9948255 ACAGGTGGTAGACTTGCTG 59 NA Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0112971 2 1 2 96 X 9905138 9905218 GGAAACTCTATGGTCATTGGC 59 9905276 9905294 GGAGGGCAGATTGAATGTG 58 NA Drosophila melanogaster 61 BCL7-like FBgn0026149 FBtr0071358 2 1 1 80 X 9251289 9251605 TCTAACACCTGTTTCTCCGT 58 9251647 9251666 GTTCGAGTCCTCAGAGAAGG 59 NA Drosophila melanogaster 61 CG17446 FBgn0030121 FBtr0071327 1 1 1 80 X 9166630 9166710 CAGGTTCATGATAGGCTGC 58 9166568 9166586 TGTTTAGCCTCCTTCTCGG 59 NA Drosophila melanogaster 61 CG32703 FBgn0052703 FBtr0071329 2 1 1 80 X 9158480 9158500 CATGCTGACTGATTATGTTGC 58 9158347 9158438 ATTCCCTTGGTGTAGTTGC 57 NA Drosophila melanogaster 61 org-1 FBgn0021767 FBtr0071244 2 1 1 82 X 8345439 8345457 GGATGAAGCAGATCGTGTC 58 8345278 8345396 GGAGTTCAGAATGATATGTCCA 57 NA Drosophila melanogaster 61 CG10761 FBgn0030015 FBtr0071187 2 1 1 60 X 8055827 8055848 GAGAACAAGTTATTGAGCATCC 57 8055788 8055806 CCAATCCCTTGATGGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1575 FBgn0029999 FBtr0071151 3 1 1 60 X 8012860 8012882 GATAGTCAGTCACTTGGATAAGC 58 8012902 8012920 GAACTTCTCTTGGCCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071130 2 1 2 80 X 7838003 7838023 CTCAATCACTACGAATGGTCG 59 7837873 7837961 AAAGGTGTCCTTGTAGGCA 58 NA Drosophila melanogaster 61 Pdp FBgn0029958 FBtr0071076 2 1 1 84 X 7627515 7628065 TGAGTCCATACGATGTTAACCT 59 7627452 7627470 TCATAGCTGCGGATGACTC 59 NA Drosophila melanogaster 61 Hira FBgn0022786 FBtr0071070 1 1 1 80 X 7618800 7618886 CATGGAGTTGAGACATTCGG 58 7618928 7618947 GCCTCGCATAACTTGATCTG 59 NA Drosophila melanogaster 61 CG14427 FBgn0029931 FBtr0071010 1 1 1 60 X 6935205 6935224 GGATAATGCTCAGATGCCTC 58 6935244 6935265 CGTGGATTGCAGATAGTTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3032 FBgn0029928 FBtr0071032 2 1 1 60 X 6906847 6906866 AAATTCATCTGCGAGCAGTG 59 6906806 6906826 GGTGGTATTTAAGATTCGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14440 FBgn0029894 FBtr0070987 2 1 1 72 X 6592179 6592201 GAGTATCTCAGCTATGAGAGTCC 59 6592129 6592148 TGTTGTACTCTAAGAGGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 2 2 2 80 X 6575397 6575479 GGCTATTGTCTGATGGCAG 58 6575523 6575541 TCTTGGCAATATTCTCGCG 58 NA Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 3 2 2 90 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492628 6492717 GACCAAACATCGTGAAGCTC 59 NA Drosophila melanogaster 61 CG42340 FBgn0259242 FBtr0299863 2 1 1 89 X 6378094 6378112 GTCGATAACGGAGGACCTG 59 6377946 6378043 AGCAAAGTGTCCTGAAATAGC 59 NA Drosophila melanogaster 61 swa FBgn0003655 FBtr0070922 1 1 1 123 X 6259451 6259469 CAGACTTTGATGCGGATGG 59 6259165 6259365 TTATGATCATCGCCATCGAC 58 NA Nonspecific Drosophila melanogaster 61 CG15896 FBgn0029858 FBtr0070898 2 1 1 114 X 6186687 6186771 CTTGACCAGCAATCTGTCG 58 6186849 6186867 CAGATGAAAGGCGTGACTG 58 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953,FBtr0089393 3 2 2 80 X 6025983 6026234 GTCTGTAATGAGGAGGCCA 58 6025921 6025944 GGTATAGTACTGGTTCCAATTGAC 59 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 3 2 2 102 X 5567067 5567085 AAGAAGGAACTCACCAAGC 57 5567151 5567251 GGATCTTGGAGAGCTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 3 3 3 82 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309885 5309905 AAATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 Cdk7 FBgn0015617 FBtr0070756 1 1 1 91 X 5202922 5202940 AGGCTCCTAAACGATGCTG 59 5202778 5202867 AAACTGTGGCAAACTGACC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 brn FBgn0000221 FBtr0070638 2 1 1 60 X 3999003 3999021 GCGATCAGTTCAATCGCAG 59 3999044 3999063 GCCGAAACATAGTAGTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6414 FBgn0029690 FBtr0070624 2 1 1 80 X 3863805 3863826 CGAAAGCTTCTACTTCAAGTCG 59 3863660 3863765 CATCCATCCGAGATCAGGTC 59 NA Drosophila melanogaster 61 fd3F FBgn0061173 FBtr0070602 2 1 1 80 X 3698284 3698302 ACGGAGCTCATCGAATACG 59 3698343 3703464 GAAACGATCGGATATCCATTGG 59 NA Drosophila melanogaster 61 rst FBgn0003285 FBtr0070562 3 1 1 103 X 2849648 2849666 ATGTGACTCGCAAGTTCCA 59 2849224 2849583 ACTGGGAGCATAGCTTATGTC 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 3 3 3 124 X 2609204 2609222 CTTCCTTCACTCGTCCGAG 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458,FBtr0114528,FBtr0070457 1 3 3 127 X 2340769 2340790 CCAGAACTCCTTATATCCACTG 57 2340599 2340681 GTTTGTTCTCATCCTCCGG 58 NA Drosophila melanogaster 61 pcx FBgn0003048 FBtr0070395 3 1 1 80 X 2119888 2119960 GCCTACCTGTACTTTCCGA 58 2119998 2120022 CTTTACCATCAGTATGGTTAAGCTC 59 NA Drosophila melanogaster 61 CG14787 FBgn0027793 FBtr0070298 2 1 1 72 X 1355426 1355445 GAATAGGAGTAGGCGTACCG 59 1355373 1355391 ATGGATGTACTGCTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14625 FBgn0040358 FBtr0070202 2 1 1 80 X 1094814 1094832 GACGATCGTGGTTACTCCA 59 1094874 1094974 GCCAAAGCTGTAATCTTTGCT 59 NA Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 1 1 1 177 X 1054165 1056336 ATATTCGCAGTGCGTTAGC 58 1054006 1054024 GCTGGGTAACATCAGTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3706 FBgn0040342 FBtr0070189 2 1 1 60 X 826121 826139 CGAAGAGCTATGACGTGGT 59 826079 826098 ACCATTAGTTTCTGGCCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sec22 FBgn0260855 FBtr0070141 2 1 1 85 X 700766 701014 ACCTATTCCACTACCTAATCGAG 59 701059 701077 GTAATTGAAGGCCAGTCGC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070124,FBtr0070127 1 2 8 62 X 550608 550626 CCATCTGTGGTAGAGTCGG 59 551146 551164 ATTGCAACTTGATGCTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13367 FBgn0025634 FBtr0070121 3 1 1 142 X 539815 539833 TGTACTACGCCCAGATACG 58 539939 540033 CTCATCGGGTCCGATTAGG 59 NA Drosophila melanogaster 61 CG13365 FBgn0029529 FBtr0070160 2 1 1 109 X 514978 514996 CTACGGCTACAAGACGGAG 59 514887 514906 TGTGGAATCCAGAGAACCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 1 2 2 89 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505986 506004 AGTATTGGTTCCCTGTCCG 59 NA Drosophila melanogaster 61 CG12470 FBgn0040371 FBtr0070069 3 1 1 162 X 201913 202130 GTTTAGCTAGTTGACGTCAGG 58 202254 202272 TTGCCCTTCTTTCCTTTGC 59 NA InUTR Drosophila melanogaster 61 CG13377 FBgn0261446 FBtr0070106 2 1 1 136 X 152855 152937 CAGTGGCACAAACCATGTC 59 152737 152756 ACTTAGAAGCGCATATCGCT 59 NA Drosophila melanogaster 61 CR40560 FBgn0085743 FBtr0114193 2 1 1 73 U 3558115 3558133 TTCAACTTTCCCTCACGGT 59 3558060 3558081 GGTGGTAAATTCCATCTAAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42420 FBgn0259851 FBtr0300149 2 1 1 60 U 7243564 7243583 CCCACCAACTACTTTCAGGA 59 7243523 7243541 AGTGCTGGCTGAAGTACTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40188 FBgn0058188 FBtr0302217 1 1 1 95 U 2232706 2232865 TTAGAGCTGGGAACGTCAC 59 2232924 2232942 ACGACGAGATATAGCGCAG 59 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 1 1 3 60 4 996136 996158 CCACTTTAAGATTCCTGTAGTGG 58 996176 997399 TTTACACAAGATGGAGAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 1 2 2 80 4 822725 823031 AAAGTCATGGGAGAGTGTGG 59 822664 822684 TTACTGAGTCACGACTCACTC 59 NA Drosophila melanogaster 61 CG31997 FBgn0051997 FBtr0089154 3 1 1 82 4 175702 175721 AAAGTCGTGGGACCTTACTC 59 175578 175658 CGAGTTCGAATAGCTTTGCA 59 NA Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085823 1 1 3 253 3R 27501092 27501187 ACGATCCAAAGGGTATACCC 59 27501403 27501421 TACCATGTTGGATCGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31204 FBgn0051204 FBtr0085814 3 1 1 60 3R 27218417 27218437 CCTGATGAACGATTGCTTGAG 59 27218377 27218396 AACCACTACAGGAGTAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spn-F FBgn0086362 FBtr0085760 2 1 1 127 3R 27081681 27081768 AAATCGCATAGCACTCAAGC 59 27081855 27081876 GTTGGCTCTCATAGTTCTTCAG 58 NA Drosophila melanogaster 61 CG11317 FBgn0039816 FBtr0085741 2 1 1 91 3R 26917834 26917855 TCAACATCGAAGGAGATTAACG 58 26917483 26917783 GTGAGTGATTCGTCGTAGTC 58 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 1 2 2 80 3R 25777671 25777689 GGAGAATCTGACATCCCGG 59 25777545 25777630 ATCGATTTCTGGGTATCATTGC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 3 4 6 80 3R 25723353 25727909 CTGCGGAAGGAAATGAACG 59 25727951 25727971 TTGGATCGATTCGTTAAGCAC 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 1 4 5 81 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 CG7582 FBgn0039681 FBtr0085464 3 1 1 142 3R 25506958 25506982 GTTACTATTGTCCTATACTTCTCGC 59 25506778 25506859 CGACGGTATTCCTTCTTGAG 58 NA Drosophila melanogaster 61 CG7568 FBgn0039673 FBtr0113306 3 1 1 83 3R 25426481 25426558 CTACTATCCGCCAGGACTG 59 25426416 25426438 TCTAGGTCAAGTAGATCGAAGTG 59 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 1 3 3 80 3R 25073569 25073652 TCTTACCAAATGGATCTCGGT 59 25073509 25073527 AAATCGGGCTCATCAAAGC 58 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 1 3 3 108 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046232 25046250 GAACTTGAAGTTGTCGGCC 59 NA Drosophila melanogaster 61 CG14512 FBgn0039639 FBtr0085413 3 1 1 60 3R 24964146 24964164 AAAGCTCTACAGAACCGGA 58 24964104 24964122 ATGGTTGCGAATTTCCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14518 FBgn0039621 FBtr0085341 3 1 1 121 3R 24850741 24850815 GCCTTATCAATGTGATGCTG 57 24850899 24850917 GGCAAACCTTATTCCTGCT 58 NA Drosophila melanogaster 61 CG34295 FBgn0085324 FBtr0112491 2 1 1 60 3R 24615718 24615740 CTATCGCTGTGGATAATGTAGTC 58 24615757 24615778 AAGTGAAGAATGCTAAGCTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303,FBtr0301302 1 2 2 80 3R 24334756 24334774 GAGGGACCTGATTAGGGTG 58 24334818 24334891 TTTGCGATGTCGTTATCGG 58 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 2 3 3 94 3R 24168448 24168466 CAGGATGATGACGAGGACC 59 24168520 24168612 TTGTTCGATACCTCTGGTATCTC 59 NA Drosophila melanogaster 61 CG5639 FBgn0039527 FBtr0085202 3 1 1 82 3R 23416028 23416046 CGTATGCCAGGAGTTTCCA 59 23415901 23415987 GTGGTCATTCTTAAATCCGTACTC 59 NA Drosophila melanogaster 61 CG5402 FBgn0039521 FBtr0085213 3 1 1 157 3R 23328433 23328453 GGTTAAAGTAGCTGTTGACGT 58 23328044 23328062 GCGATGGCAAACTAGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34006 FBgn0054006 FBtr0100061 2 1 1 87 3R 23045015 23045033 AAGGCTCGAGGAATCTTGG 59 23043886 23044967 CGCTCATAAATGAAACCTTTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17192 FBgn0039472 FBtr0085153 3 1 1 86 3R 22843900 22843976 TATTAGTAGCGGGTAATGCCC 59 22843834 22843852 GAAATGTGCCATCCTCCTG 58 NA Drosophila melanogaster 61 CG14245 FBgn0039452 FBtr0100553 3 1 1 109 3R 22554523 22554541 GCTACTCCTCCTTCTGCAG 59 22554614 22554632 CTTCAGGTAGAAGTGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlK FBgn0039439 FBtr0085053 2 1 1 63 3R 22453828 22453846 GTCAGTACGATCAGTTGGG 57 22453783 22453801 TTCAGGGTAGAGGCAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlB FBgn0039436 FBtr0085057 1 1 1 125 3R 22449123 22449211 CATTCATTGTCCTGTGTTTGG 58 22449018 22449036 ATCCACCACTGATAGAGCC 58 NA Drosophila melanogaster 61 TwdlP FBgn0039435 FBtr0085058 1 1 1 60 3R 22446893 22446912 AGTTAGCTATAGTGCCGCTC 59 22446852 22446872 GGCATAGAAGCTGTAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14239 FBgn0039424 FBtr0113295 2 1 1 80 3R 22228772 22228790 ACAAGAATTGCACGGATGC 59 22228603 22228728 AGCAGTTTGCTCCATACCA 59 NA Drosophila melanogaster 61 CG6036 FBgn0039421 FBtr0085027 1 1 1 60 3R 22170327 22170346 AATATGACACTGCTCCTCCT 58 22170286 22170306 TAACTGCATCCATATCGACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vps2 FBgn0039402 FBtr0084967 2 1 1 99 3R 21878862 21878880 AGTTCATGCTGATGAAGGC 58 21878943 21879021 TTCGTGACACCTTTCATGG 58 NA Drosophila melanogaster 61 m2 FBgn0002592 FBtr0084981 3 1 1 68 3R 21842949 21842967 CTACTGAAAGTGGGTGGCA 59 21842899 21842917 GAGATCCACGTTGTTGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11859 FBgn0039306 FBtr0084816 1 1 1 90 3R 21091829 21091906 AAAGAAATATGATGGCTACCGC 59 21091957 21091975 AAAGGAACTGACCGATCCC 59 NA Drosophila melanogaster 61 CG11852 FBgn0039297 FBtr0084809 1 1 1 183 3R 21063494 21063569 GAATTTCCCTCCCGAACTG 58 21063716 21063734 TAGATTCAGGGAGCCAGTG 58 NA Drosophila melanogaster 61 CG31109 FBgn0051109 FBtr0084791 2 1 1 86 3R 20879885 20880085 CAATTACAATATCTCCGACTGATCC 59 20879823 20879841 TCAGGAGCGAGTAATGCTG 59 NA Drosophila melanogaster 61 Osbp FBgn0020626 FBtr0084801 2 1 1 95 3R 20761858 20761985 TACGTTCAAATCAATCCCTTGG 59 20761784 20761802 GTTGTTCACCGTTGTGGTC 59 NA Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 3 2 2 81 3R 20459020 20459038 ATACGTTCGCCAACTTCTG 58 20459081 20459163 CCGCTATATCTAATGTAGGCC 57 NA Drosophila melanogaster 61 Syx18 FBgn0039212 FBtr0084670 3 1 1 79 3R 20450216 20450234 TAGACATTGCCCAACTGCA 59 20449836 20449855 GGCACTAACTATCCTGTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Golgin84 FBgn0039188 FBtr0084629 3 1 1 116 3R 20182201 20182275 AGCACAGATGATGTCAAAGC 59 20182104 20182122 CCGAATACCCATGGAGTCC 59 NA Drosophila melanogaster 61 CHORD FBgn0029503 FBtr0084554 3 1 1 81 3R 20013074 20013093 GTCAACCTGGTATTTCCCGA 59 20013134 20013213 CATTGCTCACATTCACAATTCC 58 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084537,FBtr0084536,FBtr0084538 1 3 3 60 3R 19878788 19878806 ATTCTTCTCCTACACCGCC 59 19878829 19878848 ATCCATGTAGATTTCGACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab7 FBgn0015795 FBtr0084503 1 1 1 81 3R 19819831 19819849 ATACAAAGCCACGATCGGA 59 19819894 19819976 GTCCCAGATCTGCATTGTG 58 NA Drosophila melanogaster 61 CG18754 FBgn0042106 FBtr0084439 1 1 1 80 3R 19510359 19510380 CGAGAATGCAGAGCTTAATGAG 59 19510420 19510914 AGCACATAGCGAATCAAGGA 59 NA Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 2 2 2 276 3R 19382197 19382216 CTCCTCCTACTATCCACCAC 58 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368,FBtr0084369 2 3 3 84 3R 18947821 18947839 ATGACTCCACGCATCACTC 59 18947886 18947966 TCTTCCCAGTGGATTCTACG 59 NA Drosophila melanogaster 61 Gr94a FBgn0041225 FBtr0084346 1 1 1 60 3R 18878185 18878205 ATGTCCTTGTCCATGATTCTG 58 18878227 18878245 AGAAACCCACCGTTATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 2 3 3 80 3R 18876581 18876602 TTTGCTTCTCCAATGATGTGAG 59 18876458 18876540 CGTTATTGGCCGTCAAAGG 59 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0302855,FBtr0084300 1 2 2 80 3R 18503493 18503513 CGGTGTTAAGCAATAATCGCT 59 18503554 18503633 TGTCCACAGAGAACTGAGAG 58 NA Drosophila melanogaster 61 CG31161 FBgn0051161 FBtr0084271 3 1 1 94 3R 18443666 18443685 AAATGGAGATCGATGTGCTG 58 18443741 18443814 GGCCTTCATCATAATCTGCT 57 NA Drosophila melanogaster 61 CG7077 FBgn0038946 FBtr0084205 3 1 1 81 3R 18178182 18178260 AACTCATTGAGGCACTCAG 57 18178304 18178323 TGCTCTTCATCATTGAGGTC 57 NA Drosophila melanogaster 61 CG13408 FBgn0038929 FBtr0084179 1 1 1 80 3R 17907606 17907625 AGAATAATGTGGAGGGAGCT 58 17907668 17907985 TGTGCCTCAGATAGTCACG 59 NA Drosophila melanogaster 61 CG6015 FBgn0038927 FBtr0084183 2 1 1 80 3R 17859135 17859153 GTCTAAGCGACATAAGCGC 59 17859008 17859091 TACGCATCCTTGATGTGCA 59 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 1 2 2 60 3R 17840974 17840995 ACAGCTATCTATCGCTGTACAG 59 17841016 17841107 TTCTTCGGCTTAACCAACG 58 NA DesignNoJunction Drosophila melanogaster 61 Rh3 FBgn0003249 FBtr0083876 1 1 1 60 3R 15907273 15907292 CCATCACCATATGCTTCCTG 58 15907232 15907250 ATCAGCGACATAACTCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0302327 2 1 3 143 3R 15689903 15690054 AAAGCAAGTCGAATCAGCG 59 15689778 15689798 GATACGGATTGATGAAGCTCC 58 NA InUTR Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 3 4 4 134 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981396 14981415 ATAACAGGGTTCTCGGACTC 59 NA Drosophila melanogaster 61 CG14286 FBgn0038673 FBtr0083710 1 1 1 60 3R 14850204 14850225 GCAAATCAAATTCACACCTACG 58 14850243 14850264 CGACTTCTTTACAAAGCTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083688 1 1 2 80 3R 14502538 14502619 CTCATAGAATCCCGTCAAATTGAG 59 14502481 14502499 GGCATCGTACAGGATTTCG 58 NA Drosophila melanogaster 61 tatl FBgn0260241 FBtr0299939 1 1 1 80 3R 14081524 14081603 TGTTTGCCAAAGAAGTACTCC 58 14081645 14081663 TTCGACGACTTTGTCATGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 2 1 1 85 3R 14046383 14046402 TAATCGACTGTCCGGATGTG 59 14046513 14046531 AAAGTAGTCGCTTTGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 TyrRII FBgn0038541 FBtr0083512 3 1 1 82 3R 13566757 13566775 GACATTTGGATCTCGCTGG 58 13566821 13567441 GCGAGATACCTGTCCAGAC 59 NA Drosophila melanogaster 61 AttD FBgn0038530 FBtr0083470 1 1 1 99 3R 13451118 13451136 GATCTTGCCAATGCTCGAG 59 13451199 13451294 CATGACCATTGGCGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG14332 FBgn0038509 FBtr0083446 3 1 1 60 3R 13247744 13247762 GAATAACCCGTGGCTACTC 57 13247702 13247723 GATCCATATCCAGAGATGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33333 FBgn0053333 FBtr0083441 3 1 1 60 3R 13243320 13243338 GCAGTCATTTCGCAAGGAC 59 13243362 13243380 CTTGACCGTAAGCAGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411 3 1 2 149 3R 13059256 13064632 AAGTATTCCTTTCACGGAGGA 58 13059127 13059145 TTGCCATTACCATTCCCGT 59 NA Drosophila melanogaster 61 CG31269 FBgn0051269 FBtr0113401 3 1 1 76 3R 12953522 12953540 AATGGTTACCTGGTGGGAC 59 12953718 12953737 TAAACACTGGCATGAACGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 2 3 3 108 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901810 12901828 TAAACCTCTCGCTCCTCCT 59 NA Drosophila melanogaster 61 mRpS11 FBgn0038474 FBtr0089894 3 1 1 109 3R 12898897 12898969 ATCACAAAGGAGTCCTCCG 59 12899041 12899060 TCCACTAATGGTAACCGCTG 59 NA Drosophila melanogaster 61 CG3995 FBgn0038472 FBtr0083428 3 1 1 96 3R 12868325 12868399 GGAGAAGGGCCTTAAAGGA 58 12868247 12868265 GACGAAGTAAGACTGGTGC 58 NA Drosophila melanogaster 61 CG3534 FBgn0038463 FBtr0083370 1 1 1 93 3R 12824614 12824632 AATCCTTGTCACAGGAGGC 59 12824687 12824766 TCCTTCATCCTGGATATGGAC 58 NA Drosophila melanogaster 61 MESK4 FBgn0043069 FBtr0083367 2 1 1 65 3R 12815123 12815143 CGTAAACCTGGACATAAACAC 57 12815167 12815252 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110962 1 1 2 185 3R 12298435 12298453 CTACAGCATCCTCCTCGTG 59 12299205 12299223 GTCCGGATAGATCTGGTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 3 2 2 93 3R 12256832 12256850 GATGGGAAGGATCTTTGGC 58 12256906 12257015 GTTGTACAGAGACACAGTGG 58 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 2 2 2 129 3R 12209799 12209821 CATAAGGATAAGGAGGATAACGG 58 12205508 12209710 ATCCATTTAGGGCCTGGAG 58 NA Drosophila melanogaster 61 Sulf1 FBgn0040271 FBtr0083273 1 1 1 87 3R 12137951 12137969 TTCATTGGAGCAAACGCAG 59 12137821 12137900 AGAGTCTGCATGGTTCTCG 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 5 5 82 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723137 11723282 TTTCAGTTGGTTGTAAGACTCC 58 NA Drosophila melanogaster 61 CG9590 FBgn0038360 FBtr0083172 2 1 1 89 3R 11613470 11613548 GACATAGCCAATCACTGGAC 58 11613600 11613618 GCTCTTAGCATAGGCTTGC 58 NA Drosophila melanogaster 61 CG5073 FBgn0038331 FBtr0083094 2 1 1 80 3R 11198227 11198246 GGCCGATCTGAATGTTAACC 59 11198289 11198365 CGGTATTCATTGAGGTCCG 58 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 3 1 1 184 3R 11158533 11158736 GGGTTTGAACATGAAGCCTG 59 11158368 11158386 TGCTGAAGTTCAGGTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 MRG15 FBgn0027378 FBtr0083125 1 1 1 176 3R 11103270 11103346 TAATAAGAAAGGCAGCGCC 58 11103112 11103130 TTAGTAGTCGTGGTGCCAG 59 NA Drosophila melanogaster 61 VhaPPA1-1 FBgn0028662 FBtr0083005 1 1 1 90 3R 10729735 10729754 GTACGTCATGTGATTGTGGA 58 10729605 10729682 GTTCACTGTCGAATTGCAG 57 NA InUTR Drosophila melanogaster 61 CG14860 FBgn0038273 FBtr0289976 1 1 1 165 3R 10720665 10720685 TGGTTGGATAATATTGCGGAC 58 10720872 10720890 TTGGCTTACTGACCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7362 FBgn0038258 FBtr0083015 3 1 1 212 3R 10577777 10577796 GTCCTGCGATATTGTACTCG 58 10575270 10577605 CTAGTACTGAAAGTGTATGCCT 57 NA DesignRelaxed Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 1 3 3 111 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451940 10452025 CAAGGAATACCTTTAGCACACC 59 NA Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082932 3 1 2 96 3R 10152897 10152984 CAGGAATCTTTCACGGTCG 58 10153043 10153062 CATCTGCCGAACTTGATCAG 59 NA InUTR Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 1 3 3 85 3R 10126664 10126683 AAATGCATGAACGACTTCCT 58 10126731 10126958 CTGACCAGGTCCTTAGAGC 59 NA Drosophila melanogaster 61 CG9918 FBgn0038201 FBtr0100131 2 1 1 85 3R 9926578 9926596 GGGCACTAACCAATTCCAG 58 9926422 9926530 CGTCGGATTCTGCATTATCG 59 NA Drosophila melanogaster 61 Cyp6d5 FBgn0038194 FBtr0089766 1 1 1 119 3R 9856499 9856608 TATACTCGAGACTGCTCGC 58 9856688 9856709 GAGATTATGATGGGAGTACCCT 58 NA Drosophila melanogaster 61 CG7966 FBgn0038115 FBtr0082715 2 1 1 80 3R 8876109 8876190 AATAAATGGCGACGAGGCT 59 8876047 8876069 CCATTTGTAGAAGTTGAGACGAC 59 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290274,FBtr0290273,FBtr0082730 3 3 3 81 3R 8785056 8785074 GGATAACTTGCATGCCGTC 59 8784929 8784947 AAGGGTGTGAATGTCATCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33929 FBgn0053929 FBtr0091933 1 1 1 100 3R 8720014 8720035 CGAACATATAAATACGCGTCCT 58 8719863 8719955 GCAACTGGATATCCTTTCCAG 58 NA Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 1 2 2 80 3R 8378964 8379504 CCTTTCTTCCTGTGGTACAC 58 8378903 8378921 CCAGAAGAGGATTGAGACG 57 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 3 5 5 62 3R 8271981 8272000 AAGGGAGTCGATCTATCCGA 59 8272019 8272104 GTAGTATTTCTTCTGGAACATGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pp1-87B FBgn0004103 FBtr0082595 3 1 1 127 3R 8250235 8250347 AATGATGCATGAAACCCGG 58 8250126 8250144 AAACTGCAGTCATCTGCTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 2 2 2 90 3R 8235153 8236006 CATCCCAAGGATCCCAAGG 59 8236060 8236078 ACTTGCGACAATGATGGGA 59 NA Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 2 2 2 180 3R 8175698 8175928 AAGCTAGCCAACCAAATCC 58 8175536 8175555 CTTTAACGTATCCACTGCCA 58 NA Drosophila melanogaster 61 Cyp313a3 FBgn0038007 FBtr0082617 2 1 1 89 3R 8064465 8064483 GTGCCTAAATAGGAGCTCG 57 8064339 8064413 TCAACCCATTTAGATGCCTC 57 NA Drosophila melanogaster 61 sad FBgn0003312 FBtr0082475 2 1 1 84 3R 7703236 7703254 CATTCCAAGGGTGAAGGGA 59 7703301 7703796 GTACTTATGAAGGTGCGTGG 58 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 1 4 4 80 3R 7614293 7614374 TACTCAACAGGTAACTTCACC 57 7614415 7614434 GTAGGTGTGGAACAAATGGT 58 NA Drosophila melanogaster 61 CG14710 FBgn0037920 FBtr0299566 1 1 1 82 3R 7445994 7446012 AATGATCTGCCTGTTTGGG 58 7446058 7446134 ATTGGCGAACCCTAATCCT 58 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 1 2 2 86 3R 7414839 7414857 CATAAGTTCACGCACCTGC 59 7414717 7414792 ATGAACCATAAGATCTTGCCTG 58 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100321,FBtr0100320 3 2 3 205 3R 7390325 7390343 CCTCCACCTTCAAGACCTC 59 7390070 7390088 CTTAACGTTGCCGATGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4565 FBgn0037841 FBtr0113216 2 1 1 60 3R 6679217 6679237 CTTTCATTATGGCGGAGAAGG 59 6679259 6679277 ACAGAGGCAAGTCTTTCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cad86C FBgn0261053 FBtr0301933 2 1 1 80 3R 6671487 6671574 GTTCGCATCAAGCATAACC 57 6671616 6671636 GTCGTTGATCAGATTAGTCCT 57 NA Drosophila melanogaster 61 nerfin-2 FBgn0041105 FBtr0082177 3 1 1 86 3R 5898613 5898762 TTTCGACGTCAAGCTTACC 58 5898811 5898830 CTGGGACTTGAAGAAATCCA 57 NA Drosophila melanogaster 61 CG34302 FBgn0085331 FBtr0301078 1 1 1 60 3R 5650463 5650584 AATATCTAACCTCAAGCGAAGC 58 5650424 5650442 GCCCTTCCTTCCAATTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12948 FBgn0037739 FBtr0082167 1 1 1 172 3R 5572704 5572781 TTCCAATGCCGCATTAAGC 59 5572550 5572570 TTTAAATGTACGGCTACGTCG 58 NA Drosophila melanogaster 61 CG16899 FBgn0037735 FBtr0113209 1 1 1 93 3R 5554319 5554393 AATCGACAGGAAGGACGTG 59 5554244 5554263 ATTTGTTTGTCGGATGGGTC 58 NA Drosophila melanogaster 61 CG8149 FBgn0037700 FBtr0082061 1 1 1 148 3R 5330383 5330403 ATCACTAACTAACTGTACGGG 57 5330567 5330585 TATTTCCATTCACGGCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051,FBtr0082052,FBtr0082054 2 4 4 83 3R 5194234 5194252 GGGAGATCTTCTCCAAGGG 58 5194106 5194189 TACGATATCCCGTATCGATGC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091945 2 1 4 161 3R 5182385 5182577 AGCATCAATGGTATAGCCG 57 5182701 5182720 CAGCGCTGTTATTAATGCAG 58 NA Drosophila melanogaster 61 CG8112 FBgn0037612 FBtr0081904 2 1 1 148 3R 4539480 4539873 CTGAAACCGCACAGTTCTC 59 4539985 4540003 TCGAGCAACAGGATACACG 59 NA Drosophila melanogaster 61 CG33325 FBgn0053325 FBtr0081952 2 1 1 76 3R 4506028 4506046 CTGGAACGATCGGATTCCA 59 4505502 4505520 TACATTGCATCGGTCTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Atg13 FBgn0261108 FBtr0081843 2 1 1 60 3R 4176959 4176977 GCCAATAAAGAGCCTGCTG 59 4176998 4177019 CTCTGAATGGTGACGATATGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091719 2 1 2 96 3R 4069897 4069920 ATACAGATACGTATCCTTGTAGGG 59 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 3 2 3 200 3R 3785500 3785520 GATCTCAGTTTCCGTCAATCG 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG2641 FBgn0037518 FBtr0081745 1 1 1 80 3R 3619974 3619994 TTTACTACAGTGGTGAGACGG 59 3620032 3620603 GAATGTATACCTCGTTCACAGAC 59 NA Drosophila melanogaster 61 CG10919 FBgn0037514 FBtr0081739 3 1 1 82 3R 3584230 3584249 AAACCGTATTCGATGACGAC 58 3584293 3584364 CAGACAACGTATCTGAAGGG 58 NA Drosophila melanogaster 61 alpha-Est4 FBgn0015572 FBtr0081546 2 1 1 81 3R 3364196 3364273 GACGACTACAACGAAGATGC 59 3364134 3364155 CGTCATATAGGGACTTAAGCAG 58 NA Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539,FBtr0081538 3 2 2 60 3R 3357605 3357623 ATCTACGACATCTGTCGCC 59 3357644 3357665 GATTCAGGTTAGTGTAAGTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32468 FBgn0052468 FBtr0081592 3 1 1 144 3R 3140567 3140585 CTCTAATCAGCGTCAGCAG 58 3139403 3140459 CATGTTGTATACTTCGCGC 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 2 6 11 80 3R 2724256 2734249 TTGGTAAGTGTCAAGAACGC 58 2724195 2724216 AGTGAAACTCCTTCTCTAGCTC 59 NA Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 1 2 2 80 3R 2283141 2283223 TCATACAGCAATCTGAACGAC 58 2283265 2283283 GTAGGCCATGTTGAGTTCG 58 NA Drosophila melanogaster 61 CG9727 FBgn0037445 FBtr0081730 1 1 1 182 3R 2280174 2280192 GAGGTGACTCTGAGTGCTG 59 2279955 2280029 TCAAAGGTCCAATGTCTGCT 59 NA Drosophila melanogaster 61 CG1024 FBgn0027514 FBtr0290212 2 1 1 82 3R 2205788 2205809 GGTTTACATATGTCCGGAATGC 59 2205664 2205748 GATAGTCGTGTTTCGTGTTCAG 59 NA Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0078619 2 1 2 80 3R 1919994 1920013 GTGTTCAAGATTGGCGACAG 59 1919381 1919951 GCCGTAGTAGTCCTCACAC 59 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 1 4 4 133 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 Spec2 FBgn0044823 FBtr0078739 3 1 1 127 3R 1443368 1444215 ATACACTCGCTACATGCCT 58 1443259 1443277 AAGGTATGTCTGCTGCTCC 59 NA InUTR Drosophila melanogaster 61 Pcmt FBgn0086768 FBtr0078758 2 1 1 80 3R 1378763 1379007 CAGTACATGCAACAGTACGA 58 1378702 1378720 GAGAGGGACGTACATTACG 57 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687,FBtr0078686 3 2 2 80 3R 1362361 1362443 CTGCCCAAATAGAGATTGTTCG 59 1362482 1362502 TCAGGTATTCACAGATCTCGG 59 NA Drosophila melanogaster 61 CG12589 FBgn0040684 FBtr0078843 2 1 1 63 3R 963160 963178 GTCGCAGGCATAGATATGG 58 963115 963133 TCTCCAATTCTCCGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42574 FBgn0260794 FBtr0301437 2 1 1 86 3R 614710 614728 AGATGACTAAGGCCAAGGC 59 614579 614660 ATGGCAAATCCAACATGCG 59 NA Drosophila melanogaster 61 pncr009:3L FBgn0062928 FBtr0091951 3 1 1 85 3L 19480821 19480840 AGAAGGTGGACTAAATGCGA 59 19480330 19480777 GCATATTGGACTAATCTACCCAC 58 NA Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620 2 1 2 90 3L 22980812 22980830 TGGCATTGGTAAAGACCAC 58 22980881 22980968 GTTGTAATGATTGACTTGGACC 57 NA Drosophila melanogaster 61 CG6914 FBgn0037172 FBtr0078515 3 1 1 104 3L 22599678 22599696 CTAGTGGTCCTACCCAGAG 57 22599764 22599782 GCATCTTCTTGTGCTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7442 FBgn0037140 FBtr0078471 1 1 1 80 3L 21930280 21930300 GGGAACCATAAACAACTTGGG 59 21930340 21930420 GAGAAACTCCGTCCATATCGA 59 NA Drosophila melanogaster 61 CG32448 FBgn0052448 FBtr0290247 2 1 1 108 3L 21821252 21821270 GATGAGCGAAGGAAAGCAG 59 21821096 21821180 AATCTTGTTCGGCTTGGTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14564 FBgn0037131 FBtr0078435 3 1 1 76 3L 21750490 21750508 AACCCTGGAGAATACCGAG 58 21750548 21750566 ATTCCAAATCCGCTACCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14574 FBgn0037104 FBtr0078467 1 1 1 60 3L 21574212 21574230 TTACTCCTCGTGAGAGGAG 57 21574170 21574188 TCCAGGTCGTACATGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5932 FBgn0036996 FBtr0078196 2 1 1 67 3L 20454602 20454735 GTTAATGCCAATGCGAGCT 59 20454766 20454784 TGGTTGCTAGAGGATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13247 FBgn0036979 FBtr0078184 2 1 1 96 3L 20364297 20364320 CTTACTATTGGAAGTTGGAGAACG 59 20364374 20364462 AGGGACTTGCCTTTAAAGCT 59 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0074830 1 1 3 126 3L 20235767 20235902 GAGAGCACATAGCCATGGA 59 20235992 20236010 GATCCACCCGTAATCTCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hale FBgn0036924 FBtr0074912 2 1 1 107 3L 19978587 19978664 AGGGTCTGAGCATTGACTG 59 19978498 19978516 CCAAGCCACCATTGAACTG 59 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 1 2 2 80 3L 19650050 19650204 CTGGATCAGAATCTGTTCAATGG 59 19649992 19650010 CATGGATTCGTGCGATGTG 59 NA Drosophila melanogaster 61 Oat FBgn0022774 FBtr0074961 3 1 1 111 3L 19640644 19640719 TTAACCAGAAGTTCGATGCC 58 19640552 19640570 TTGATGACCAGTGGAGGAG 58 NA Drosophila melanogaster 61 825-Oak FBgn0052208 FBtr0273406 2 1 1 88 3L 19465196 19465273 TCAAATACGCTGTCGTCGT 59 19465126 19465144 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 2 2 2 80 3L 19290533 19290623 CCACCATGAATTTGATCACGA 59 19290665 19290683 ACTAGCTCCTGATTGAGGG 58 NA Drosophila melanogaster 61 CG10424 FBgn0036848 FBtr0075033 3 1 1 91 3L 19090469 19090487 CGATCTTATCGTGCATCCA 57 19090318 19090414 GTCCAATAACAACGACGTG 57 NA Drosophila melanogaster 61 CG18234 FBgn0036794 FBtr0300049 2 1 1 82 3L 18598263 18598282 CATAGAATGCAGCCTAACCA 57 18598327 18598406 AACCATTTGACGAGTGTCC 58 NA Drosophila melanogaster 61 CG7497 FBgn0036742 FBtr0300284 2 1 1 136 3L 17629624 17629802 ATCTACCACAAGCACATTACCT 59 17629899 17629917 TTAAGCTGGTCCGGATTGG 59 NA Drosophila melanogaster 61 CG13731 FBgn0036717 FBtr0075237 1 1 1 86 3L 17382784 17382925 ATCTTCGAGTTCAACCGGT 59 17382716 17382734 GGATCAGGCCTAAATGCAG 58 NA Drosophila melanogaster 61 CG7692 FBgn0036714 FBtr0075215 1 1 1 142 3L 17346707 17346725 CAACTGGTCGTACGTTCTG 58 17346830 17346904 GGAAAGCAACTTCTTCTCCT 57 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113427,FBtr0075285 3 2 4 98 3L 17160139 17160157 TAAGGTACTCACCCAAGGC 58 17122058 17158017 GTTCTCGTCACCATCTTGG 58 NA Drosophila melanogaster 61 CG7730 FBgn0036689 FBtr0089584 1 1 1 80 3L 17021743 17021761 TAAATGGTGCCTCAATGGT 57 17021805 17021881 GGTCATCTCCATGTTTCGA 57 NA Drosophila melanogaster 61 CG4229 FBgn0036639 FBtr0075392 2 1 1 76 3L 16549957 16549976 AAGACGCAAATCGTAAACCC 59 16550202 16550220 GAGAGGGTAAGGACACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5018 FBgn0036578 FBtr0075484 1 1 1 60 3L 16221606 16221627 CGTATAGTAAATCGAGCAAGTG 57 16221497 16221515 CATAGCTCAATGACGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33795 FBgn0053795 FBtr0091799 3 1 1 107 3L 16164346 16164427 GAGATTAAGTCAGTATTCTGTCACC 59 16164263 16164281 CGATTGACAGCCTTCAAGC 59 NA Drosophila melanogaster 61 CG42538 FBgn0260646 FBtr0301002 1 1 1 182 3L 16027694 16027772 GTCGTCCAGTCTTTCAGCT 59 16027917 16027936 TGCAATCTTCCACTTTGCAG 59 NA Drosophila melanogaster 61 Eig71Ed FBgn0004591 FBtr0075572 3 1 1 80 3L 15645933 15645953 CTAAGACTCGGAACAATTGGC 59 15645994 15646089 GTCGATTAGAACCCAAGCAG 58 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0075592 2 1 3 105 3L 15580170 15580189 CATATCGCTGCTCAATGAGC 59 15579674 15580107 GATGTTTGGATACTCATTGTCCTG 59 NA Drosophila melanogaster 61 CG5114 FBgn0036460 FBtr0075624 3 1 1 85 3L 14977146 14977164 ATCCATCTGGGACTATGCC 58 14977210 14977321 ACCATTTGATCCTTATGACAGC 58 NA Drosophila melanogaster 61 CG3349 FBgn0036459 FBtr0075623 1 1 1 60 3L 14975280 14975299 AAATCGCTTCGCTACAACAG 59 14975322 14975340 TGTTCAGTATTCTCCGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749,FBtr0075750 3 2 2 60 3L 14090844 14090865 GGATATCGTCCAGAATATTCGT 57 14090805 14090827 CACATCTAGATTGATGAGCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 3 2 2 92 3L 13994647 13994668 ATCGGTTACTGTACAGGTATCC 59 13994517 13994595 CATAGGGATTGCGCTTTCTG 59 NA Drosophila melanogaster 61 CG13738 FBgn0036390 FBtr0075790 2 1 1 60 3L 13966335 13966354 CAGGTGGTCTACTGTTCCTG 59 13966294 13966312 TTCTCACGGTGTTCGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751 2 1 2 227 3L 13837016 13837131 TGATATGTGGCTTGCTGCT 59 13837319 13837340 TGGTTAGAAAGCAATAGGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 2 2 2 81 3L 13507890 13507969 GGACAATTGCCGAAAGTGG 59 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 CG10116 FBgn0036367 FBtr0075824 1 1 1 82 3L 13450163 13450181 AAATGCACAGCCAATCGAG 59 13450045 13450122 GAATAGTTACGACTGTTGGATCTG 59 NA Drosophila melanogaster 61 CG10713 FBgn0036360 FBtr0075855 3 1 1 103 3L 13427912 13427930 ACATCAACGTGCCAATAGG 58 13424049 13427845 GAAATGTAAGTTGCGCTGC 58 NA InUTR Drosophila melanogaster 61 CG34428 FBgn0085457 FBtr0112729 1 1 1 80 3L 13055543 13055619 ATTGCACATATTACTCACACCC 58 13055657 13055678 TTCTCCGCATAGTAATACTCGT 59 NA Drosophila melanogaster 61 CG10754 FBgn0036314 FBtr0075944 2 1 1 60 3L 12806876 12806894 CGATCTGAACAAGGATCCG 58 12806834 12806852 GAGTTTGCACTCGTAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32110 FBgn0052110 FBtr0075931 1 1 1 60 3L 12802413 12802431 TCAGCAGCGAATTGATTCC 58 12802453 12802473 TTAGATAGTTCCATCAGCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10657 FBgn0036289 FBtr0075975 3 1 1 80 3L 12485847 12485932 GTTCGATCCGTACAAGTTCAC 59 12485787 12485805 TCCTCATCATCCAGCAGTG 59 NA Drosophila melanogaster 61 Rpt4R FBgn0036224 FBtr0076040 3 1 1 85 3L 11935812 11935904 TTTCTTGAAGGTCGTTTCCTC 58 11935951 11935969 GGGCGTATGCAAACATCTC 59 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0302137,FBtr0110780,FBtr0076080 3 3 3 60 3L 11813970 11813988 TGGATGACTTACGTAGCCT 57 11813928 11813949 TCAGCTATAATTCCACTTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32085 FBgn0052085 FBtr0076133 2 1 1 91 3L 11667432 11667450 CATCCAAGCATGTCCACTC 58 11661697 11667377 AAACAAACTCTGCAGGTGG 58 NA Drosophila melanogaster 61 CG32085 FBgn0052085 FBtr0076133 1 1 1 80 3L 11647203 11661304 GTTAATATCGTGCACTCCCTG 59 11647143 11647161 CTCCACTCCATCATCCGTC 59 NA Drosophila melanogaster 61 l(3)01239 FBgn0010741 FBtr0076238 2 1 1 67 3L 11067239 11067260 GGTCAACAGTTTAAATACGCTC 58 11067089 11067109 CCTCCAGAGTTTCTATCACAG 57 NA DesignNoJunction Drosophila melanogaster 61 l(3)01239 FBgn0010741 FBtr0076238 1 1 1 66 3L 11067238 11067259 GTCAACAGTTTAAATACGCTCG 58 11067089 11067109 CCTCCAGAGTTTCTATCACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6310 FBgn0036121 FBtr0076239 3 1 1 82 3L 11062394 11062476 TCTATTGCCTACAATCACTGAG 57 11062333 11062353 CTGATACTGGATGTTCTCCTG 57 NA Drosophila melanogaster 61 CG18628 FBgn0036091 FBtr0076256 3 1 1 205 3L 10632896 10632916 ACCATGAAGTTCCTACTCGTG 59 10633146 10633164 AATGGAGATGTCTAGCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32055 FBgn0052055 FBtr0076304 3 1 1 162 3L 10212775 10212796 CTGATAGCAGTCATAGAACCCA 59 10212578 10212654 GGTGACACCATTGAAAGTCTC 59 NA Drosophila melanogaster 61 Hsp67Ba FBgn0001227 FBtr0076495 2 1 1 60 3L 9371559 9371578 AATCAGAGTCCATGGAAGTG 57 9371518 9371536 GGTTCATCCACATTGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4484 FBgn0035968 FBtr0076503 1 1 1 111 3L 9196869 9197212 AATGAAGTGGTTCGGAACC 58 9196776 9196794 GCTGAATACCAAGACTCCC 57 NA Drosophila melanogaster 61 CG13315 FBgn0040827 FBtr0076530 3 1 1 72 3L 9090234 9090252 AACAAGCTGCAGAACTTCG 59 9090288 9090306 AGCTGCGATCATAGTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 1 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964100 8964119 GACAAGTTCCTGAATTTGCG 58 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 1 3 4 110 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 3 2 5 81 3L 8574886 8574904 GCAAATAGGGCAATTCCCA 58 8574949 8579082 CAGGTAGCGACACAATCAC 58 NA Drosophila melanogaster 61 CG33278 FBgn0053278 FBtr0076857 3 1 1 60 3L 7444689 7444708 CGATGTTAAGAACGAGGAGC 58 7444728 7444749 AGCCAAAGATGGTTTAACAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8596 FBgn0035767 FBtr0076881 3 1 1 80 3L 7336816 7336836 TTTACGATGTTTCTGATGGCG 59 7336699 7336776 ATCGGGATCTAGCTTGTTGAG 59 NA Drosophila melanogaster 61 CG32388 FBgn0250849 FBtr0076933 3 1 1 107 3L 6977516 6977534 CAAATCGCCGAAGGATTCG 59 6977364 6977447 GAAGTGGGAACAACAGTTCTG 59 NA Drosophila melanogaster 61 CG8519 FBgn0035711 FBtr0076942 3 1 1 82 3L 6701570 6701648 ATGTCCCAAGGCTGAAGAC 59 6701690 6701712 TTATCGAGTAGACCAGCAATAGG 59 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 3 2 2 95 3L 6600093 6600112 CCACCAACAGGATATTCAGC 58 6600167 6600244 TGAGAGGAATCTTGGCTATCTC 59 NA Drosophila melanogaster 61 Cpr65Az FBgn0035686 FBtr0076996 2 1 1 111 3L 6154201 6154219 CAATGGAGGATCTTCGGGA 58 6154288 6154368 GTACTCGTACATATAAGAACCATCG 59 NA Drosophila melanogaster 61 Lcp65Ae FBgn0020640 FBtr0077056 3 1 1 143 3L 6131003 6131081 TTCAGTGGTCCTTCGAGAC 59 6130878 6130897 AGTTGACTTCGTAGGTCTGG 59 NA Drosophila melanogaster 61 CG6619 FBgn0035676 FBtr0077049 1 1 1 82 3L 6072374 6072452 TGAGGAAGGTGGATCTCCA 59 6072498 6072516 GTGTACCCTCTCCAGTTCG 59 NA Drosophila melanogaster 61 CG10478 FBgn0035657 FBtr0077069 1 1 1 146 3L 6003671 6003759 CAAATTTAATTGCGAAGGCTGG 59 6003546 6003568 CGTGTCTTATGATATAGTCACGG 58 NA Drosophila melanogaster 61 CG10635 FBgn0035603 FBtr0077154 3 1 1 194 3L 5360870 5361013 AAGTGTTCCAGAACCACGA 59 5360694 5360712 CCAGGAACGGTATGTCCTC 59 NA Drosophila melanogaster 61 CG10635 FBgn0035603 FBtr0077154 2 1 1 193 3L 5360866 5361009 GTTCCAGAACCACGATGAC 58 5360691 5360709 CAACCAGGAACGGTATGTC 58 NA Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 2 1 1 108 3L 5227732 5227750 CAACCGTATGAGAGGAGGA 58 5227821 5227888 TTTATCCAGTCGCACCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-ala-m FBgn0028962 FBtr0077168 3 1 1 86 3L 5141763 5141841 TCTGATCAATCGCGTTATCTG 58 5141888 5141907 GTGATGTCATTCTGCTCCAG 58 NA Drosophila melanogaster 61 CG13705 FBgn0035582 FBtr0073352 1 1 1 100 3L 4896884 4896902 CTAGCAGACATCGTCTTGG 57 4897037 4897055 GTAATCCGTGGCAATGGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7509 FBgn0035575 FBtr0073362 3 1 1 80 3L 4804631 4804709 GGTCAACATAGATCTTTCGCG 59 4804571 4804592 AACTCTTTAAGCACGGTTAGTC 58 NA Drosophila melanogaster 61 CG32238 FBgn0052238 FBtr0073344 2 1 1 60 3L 4649575 4649596 GATACTAGTGTTACGGAACTGG 58 4649616 4649635 TCTGCACACTCACATTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15023 FBgn0035548 FBtr0290225 2 1 1 60 3L 4461047 4461067 CAAACCAGTACCCACTTACCT 59 4461007 4461025 GGTTGTGGTGGTAGTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 3 1 1 163 3L 4292741 4292850 GTTGTTAACATAACCTTCGTGC 58 4292974 4292992 TTGAAGATCAGGTGGCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1299 FBgn0035501 FBtr0073215 3 1 1 85 3L 4151620 4151638 AATTTGTACGTTTGGGCGA 58 4151687 4151770 ATGGGATACGTACCTTGCT 58 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 2 1 1 68 3L 3471959 3471978 GTCCGCTTCAATTTCATCCT 58 3471840 3471928 CTTCAGGACTATGGGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9977 FBgn0035371 FBtr0073016 2 1 1 181 3L 2770488 2771282 ATCTACTCCACGCAGAACG 59 2770325 2770343 TTTAGCATCAAGTGCGTGG 58 NA Drosophila melanogaster 61 osm-1 FBgn0035317 FBtr0072873 1 1 1 95 3L 2230535 2230610 TCTATGACAGTATGGGTCGTC 58 2230667 2230685 GTCCATTCGGACTACAAGC 58 NA Drosophila melanogaster 61 CG42355 FBgn0259701 FBtr0299954 3 1 1 117 3L 2037954 2037973 TTACAAGAAGCATCATGCCG 59 2037799 2037876 GGTTTCTTTAGGTCTCACCTC 58 NA Drosophila melanogaster 61 HBS1 FBgn0042712 FBtr0072866 1 1 1 60 3L 1864618 1864637 GAGATCCTCAACGAAGAGAC 57 1864577 1864597 GCGCTTTCATCTTATTCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13930 FBgn0035256 FBtr0072803 2 1 1 112 3L 1670677 1670751 CACCTTCAAATTCACCCACTG 59 1670585 1670603 GCTTGTACTGAAAGTGCGG 59 NA Drosophila melanogaster 61 CG12084 FBgn0043458 FBtr0072711 3 1 1 80 3L 1491910 1491995 AATCTGACACAGGTTTATCCC 57 1491850 1491870 GATTAGCTCGTTGAGGATCTG 58 NA Drosophila melanogaster 61 CG9129 FBgn0035196 FBtr0072653 2 1 1 60 3L 1251223 1251242 TCGATAGGGTGAAGAAGGAG 58 1251265 1251283 GACTCGACGTTACTCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysE FBgn0004428 FBtr0072630 2 1 1 190 3L 1212950 1212968 AAATGAAGGCCTTCATCGT 57 1213122 1213140 GTAGTTCTCAGGACCCACC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 3 6 6 80 3L 998727 998837 GACATCGTCTGGATCTGAG 57 998665 998685 TGATCTCCTTGATGAGTAGCT 58 NA Drosophila melanogaster 61 CG13897 FBgn0035160 FBtr0072601 2 1 1 123 3L 738721 738995 AATGGATGTTGAGCTTTGCC 59 738617 738635 ATATGACCACTGGTGACCC 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 2 10 10 80 3L 302294 302370 TGTGATGGTTACCTGCCAG 59 302411 302432 TATGTTGGAGAAGATAAGCCGA 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864,FBtr0301889,FBtr0072474 3 3 6 115 3L 168747 168765 CGGTATCGTCCTCAAACTC 57 168843 172072 TGGTGTGATTACCTTTGTCG 58 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352,FBtr0273353,FBtr0273351 2 3 3 80 3L 146640 146659 GTCTTAATCTCACCTTCGCG 58 146701 146785 AAGTCACAATGCACCTTACG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-176 FBgn0086659 FBtr0091917 3 1 1 66 2R 19727559 19727580 TCTATTTGGCCGGATTAATGTG 59 19727514 19727532 CCTTACTCTGCCTTCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-CD2 FBgn0086603 FBtr0091613 1 1 1 60 2R 4984571 4984590 CATATAAAGGTCAAGCGCTG 57 4984613 4984631 ACAAGACGCTCTATCTCCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33433 FBgn0053433 FBtr0086425 1 1 1 60 2R 15624216 15624234 ATACATCGGTTCTCGTCCG 59 15624174 15624192 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0110899 2 1 2 92 2R 21072172 21072240 TTCACACTCTTGGCATCCA 59 21072098 21072116 GCACGATCTGTTTCAAGCA 59 NA Drosophila melanogaster 61 PebII FBgn0011694 FBtr0072455 1 1 1 75 2R 21061698 21061719 GTTCAGTTTACAGCATGATTCG 58 21061589 21061607 GAACAAAGAGCGCTACCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 3 2 2 163 2R 20422602 20422675 CATCGATTCAGGACACCAC 58 20422457 20422475 TAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 Adk2 FBgn0022708 FBtr0072163 2 1 1 96 2R 19912575 19912593 GATCGACTCCAACCTGGAC 59 19912652 19912734 CAATGTGTCGAGCTTCTCAG 59 NA Drosophila melanogaster 61 CG3803 FBgn0034938 FBtr0072208 2 1 1 80 2R 19841388 19841412 CAATCTCATAAAGCTAGTAGTACCC 58 19841251 19841353 ATCACTGGGATTTCCTTTATCG 58 NA Drosophila melanogaster 61 ken FBgn0011236 FBtr0072129 3 1 1 91 2R 19762610 19762684 TTGATAAGGAACCTGCTGG 57 19762738 19762757 AGGAACTTAAAGTAGGTGGC 57 NA Drosophila melanogaster 61 Ssrp FBgn0010278 FBtr0072242 3 1 1 229 2R 19694882 19694900 CGACTCGGATGAAGAGTCC 59 19694611 19694690 TGGAGGGTTTCTTTGTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG5539 FBgn0034907 FBtr0072123 2 1 1 60 2R 19692533 19692553 CTATAAGACTCTGAACAGCGG 58 19692574 19692593 AACTATCCAGTATTTGGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 3 2 2 122 2R 19574387 19574560 GAAGCTGTACGATGTTCGC 59 19574646 19574664 TCTGATCCGAGTAGCTTCG 58 NA Drosophila melanogaster 61 CG5398 FBgn0034882 FBtr0072071 3 1 1 178 2R 19490659 19490677 AACCGATGGACACTCTGTC 59 19490818 19490901 AGTTAGTTGAATCCCTGCGA 59 NA Drosophila melanogaster 61 CG3502 FBgn0046253 FBtr0273227 2 1 1 80 2R 19233237 19233326 GGTGTCAGGATCATGATAGTC 57 19233177 19233196 CCACCAAATAGGTTGAGGTC 58 NA Drosophila melanogaster 61 CG13544 FBgn0034826 FBtr0071973 3 1 1 80 2R 19027280 19027354 CAAGAACTCAAACTGCATGTC 58 19027220 19027240 GTCTTAACCCTTCCATTGTGG 59 NA Drosophila melanogaster 61 CG9897 FBgn0034807 FBtr0071989 3 1 1 120 2R 18873519 18873540 CTTTGACAATAACTTGGCTCTC 57 18873365 18873439 GCTAATCCTATTGGCTCGAG 58 NA Drosophila melanogaster 61 Nup214 FBgn0010660 FBtr0071996 1 1 1 80 2R 18809966 18809984 CTTAATGAGGCCTATGCCA 57 18809847 18809924 CATTAAACGCGTAATCTCTGG 57 NA Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 3 2 2 83 2R 18782169 18782187 TTGTCTGCTGTCCCATACC 59 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG11362 FBgn0034737 FBtr0071836 1 1 1 145 2R 18449931 18450010 TTTCTTGGGAATCACACTCG 58 18450116 18450136 AATGCGGAATACTCTGAAGAC 58 NA Drosophila melanogaster 61 mRpS29 FBgn0034727 FBtr0071842 3 1 1 60 2R 18306753 18306771 ACACGGACAAGGAATTCCA 59 18306711 18306729 TTGTTGATCCAGTGTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11275 FBgn0034706 FBtr0071769 1 1 1 133 2R 18067474 18067492 GGAATTTGTCACAGTGCCA 58 18068873 18068891 GTGGAACACGCAATCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34206 FBgn0085235 FBtr0112399 1 1 1 60 2R 18051725 18051743 CTTTGCACGGGAATTGAGG 59 18051683 18051705 GAGATCATTGTTCCACTGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34205 FBgn0085234 FBtr0112398 3 1 1 81 2R 18018692 18018710 CACGTCCACTTACAGTTGC 59 18018464 18018651 GGTAAGGATCAGAAGTTTCATGC 59 NA Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 2 1 1 60 2R 18010963 18011042 ATAGAAGAGCCAACAAGCC 57 18011063 18011084 TCATCAAACACTAATTCCGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30281 FBgn0050281 FBtr0071760 3 1 1 82 2R 18002741 18002838 GGCAGTCATGAGACAATTAACC 59 18002879 18002899 CCCGGAACTTCAATAACATGG 59 NA Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0071797,FBtr0300693 2 2 2 121 2R 17979697 17979716 AAGGTGGAGTACACCAAGAG 59 17979513 17979531 AATCCTCCCGTGTACTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666,FBtr0071667 2 2 2 62 2R 17558177 17558195 TATCGTATCCGAGAAACGC 57 17558221 17558239 CTGATGTCGGGTATGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rae1 FBgn0034646 FBtr0071683 2 1 1 84 2R 17547085 17547103 TTAAGACGTGCCACATGGT 59 17546970 17547038 GTGTCCCAGAACTTTAGGGT 59 NA Drosophila melanogaster 61 mago FBgn0002736 FBtr0071569 1 1 1 149 2R 17016322 17016340 AAGAACGACACCATGATCC 57 17016453 17016529 GATCTCCAGTTCCTGTCGA 58 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397,FBtr0273396 3 2 2 80 2R 16878321 16878394 ATGGCTTCTCATTTGGATTCTC 58 16878262 16878283 CTTGTTAATCTCATCCAAGGCC 59 NA Drosophila melanogaster 61 CG11110 FBgn0034535 FBtr0086231 3 1 1 194 2R 16529356 16529374 CTTTGGCAAGTCCTTGCTG 59 16529596 16529615 ATGAGCGATATTATGTCGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11192 FBgn0034507 FBtr0290122 3 1 1 61 2R 16242049 16242067 TGAAGTTGGAGTGTCTCCG 59 16242006 16242024 ACTGATTCGACTCCACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 1 2 2 65 2R 16151894 16151912 ATGTCGATCTTACCAAGCG 57 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086537 2 1 4 103 2R 15336243 15336841 CCAGACATGTTTCTGGGAG 57 15336158 15336176 AGTACACATTGATGCGCTC 58 NA Drosophila melanogaster 61 Spt5 FBgn0040273 FBtr0086531 1 1 1 80 2R 15327623 15327702 GATATGGTGCAACTGGATTCC 59 15327743 15327762 ATTCATGCCCAAGACATGGA 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0086584,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 1 6 6 88 2R 15048400 15048491 AGAATAAGGTCACCACCTCTG 59 15048541 15048559 GCTTCGTCCTATGGTTCCA 59 NA Drosophila melanogaster 61 Jheh1 FBgn0010053 FBtr0086625 2 1 1 109 2R 14742284 14742361 TTATCCGGATAAGACCATTGCT 59 14742196 14742220 GGTAATTCGTATTGAATCCGTACTC 59 NA Drosophila melanogaster 61 Hs3st-A FBgn0053147 FBtr0086608 2 1 1 81 2R 14633670 14633688 ATACCACCAGAGACAGCAG 58 14633732 14635565 CGGTAGCCATAGGATATCCA 58 NA Drosophila melanogaster 61 CG5327 FBgn0034363 FBtr0086707 2 1 1 89 2R 14503859 14503956 GCGTTAGGGATTGCAACAG 59 14504009 14504027 TCTCAAACATGTGCTGGGA 59 NA Drosophila melanogaster 61 CG10914 FBgn0034307 FBtr0086745 3 1 1 60 2R 14046628 14046646 AGGCGATGTCTATCTGGTG 59 14046670 14046688 CAGAATGTTGAACAGCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34386 FBgn0085415 FBtr0112627 2 1 1 80 2R 13978159 13980063 CATCAACCAAAGGTCAGCC 59 13980103 13980125 GGTAACTCATTGTTGGTGTACTC 59 NA Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 1 2 2 80 2R 13378860 13378937 CGGATGCTATATCCTTGGG 57 13378981 13378999 GAAAGGTGACCTCGTTGAG 58 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 2 2 2 91 2R 12951503 12951762 TTCTATTCGGACCACCAGG 58 12951817 12951835 GAGTATACGGCTTTGTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG15614 FBgn0034168 FBtr0087050 1 1 1 97 2R 12833851 12833869 TAGCCTTCCGGAAATGGAC 59 12833929 12834036 CATTTGGTGCTGATATCGCT 58 NA Drosophila melanogaster 61 CG4439 FBgn0034132 FBtr0087087 1 1 1 80 2R 12378859 12378880 CTACACTGGGATTATTCAGGTG 58 12378921 12379018 CACTCTTGCATCTCACCTG 58 NA Drosophila melanogaster 61 CG30098 FBgn0050098 FBtr0087168 2 1 1 114 2R 12242600 12242621 CGAATAAGAGTAATTGGTGGTC 57 12242445 12242525 TTAGAACAAAGCGGTAGGC 57 NA Drosophila melanogaster 61 CG7755 FBgn0034105 FBtr0087182 2 1 1 60 2R 12169893 12169913 GACATCCAGTTAATCGGTCAG 58 12169853 12169872 CGGGTGAATATTCCAGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15701 FBgn0034095 FBtr0087131 2 1 1 151 2R 12120372 12120479 AGGAAGTTCAGTACGCCTC 59 12120593 12120612 ATAGCTCCTCAGATCACAGC 59 NA Drosophila melanogaster 61 CG8405 FBgn0034071 FBtr0087210 1 1 1 80 2R 11936847 11936866 GCTGGAGTACAATGTGTCTG 58 11936909 11937004 ATGGCTTCCATTCCTACGA 58 NA Drosophila melanogaster 61 CG33463 FBgn0053463 FBtr0087301 1 1 1 84 2R 11783722 11783793 ATGCTAAGGTTAATGGAGCAC 58 11783658 11783676 AGCTTGCAACAATCCACTG 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 1 7 7 124 2R 11550671 11550750 TTATCAATGCACAGGGCCA 59 11550565 11550584 GTACCGATACTTCTTGCCGA 59 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 3 2 2 81 2R 11109919 11110008 GACGCTTTCAAGACATTGC 58 11110053 11110071 ACTTTCAGCGACTCTACGT 58 NA Drosophila melanogaster 61 CG7639 FBgn0033989 FBtr0087424 1 1 1 80 2R 10876490 10876509 GGGCCAATGATCTACAACTG 58 10876368 10876447 TGAAAGACATTTCAGGCCG 58 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 2 3 4 99 2R 10756534 10757571 GAATATTACATCAGCCAGGTGG 59 10756456 10756474 ACAATTGGACGTAGCTGCT 59 NA Drosophila melanogaster 61 CG10153 FBgn0033962 FBtr0087470 2 1 1 97 2R 10645181 10645199 GTTTCCCAGAGCATTGTGG 59 10645047 10645120 TCGTGGAGTCTTGTTTGCA 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 1 3 4 80 2R 10641389 10641506 ATGATCACGAGAAAGCAATGAG 59 10641330 10641350 GATTGTGTTGGATCTCGTTGG 59 NA Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087483 3 1 2 61 2R 10527994 10528015 TTCCAAGTGCATAAATCTGTCG 59 10527954 10527975 TCTAAGCTAATGAGGAGGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 2 2 2 80 2R 10395746 10395764 CATATCCAGGATGTCGTCC 57 10395808 10395899 CTGGCCGATATCATTTCCA 57 NA Drosophila melanogaster 61 Oaz FBgn0033939 FBtr0113081 3 1 1 80 2R 10349547 10349567 AAGAAACTGCATACCAACGAG 59 10349607 10349703 GATCTTCAAGTGGTCACTCCT 59 NA Drosophila melanogaster 61 CG30482 FBgn0050482 FBtr0087602 3 1 1 60 2R 9888342 9892326 AAACAGATGTCGTCGTTGC 59 9888300 9888318 TACAGCGTACATCGCTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13350 FBgn0033890 FBtr0087606 3 1 1 60 2R 9868812 9868832 GAGAAACGTCAGATAGTCCAG 58 9868772 9868791 GATTGGTCATGGGATAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16935 FBgn0033883 FBtr0087622 2 1 1 176 2R 9748784 9749141 CATTCAGGGTAAATACCCGG 58 9748627 9748645 TGATCCTCCTTGTAGACGG 58 NA Drosophila melanogaster 61 CG30485 FBgn0050485 FBtr0087640 3 1 1 60 2R 9738415 9738433 CAAGGGCACAAACTATGGA 57 9738456 9738475 CTTCTCACTACTGGTCACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34235 FBgn0085264 FBtr0300636 3 1 1 80 2R 9099618 9099639 GTTCGGCGTACTTATAATTGGA 58 9099504 9099577 TTCCGTCTTATCCATGGCA 58 NA Nonspecific Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 2 3 3 90 2R 9056874 9056894 AGGCCATTGTCTATTCCTACG 59 9056944 9057020 GCCTCATCCACAAAGATAAGG 58 NA Drosophila melanogaster 61 CG13323 FBgn0033788 FBtr0087797 3 1 1 68 2R 8934563 8934581 CTACTGGAACGTGAACGTG 58 8934513 8934531 TTGTCGTAGACGATCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bic FBgn0000181 FBtr0087782 2 1 2 220 2R 8757769 8757787 CATTTGACTACGACTGGGC 58 8758041 8758061 GAATTGTGTTTACCGACAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dgkepsilon FBgn0020930 FBtr0087853 2 1 1 82 2R 8646836 8646912 CAAGCAAATAAGGCTACAAGTC 58 8646955 8646973 GAATATCCGCTGGACTCTG 57 NA Drosophila melanogaster 61 CG13154 FBgn0033736 FBtr0087953 1 1 1 170 2R 8315279 8315297 AACGTTCAGAGCTATGGGA 58 8315066 8315086 TTCTCTAAACGCTCTATGGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cpr49Ae FBgn0033728 FBtr0087920 3 1 1 90 2R 8291006 8291682 AACTATGCCTATGAGACGGC 59 8291735 8291753 TGATCACGTCACTGGAGTC 59 NA Drosophila melanogaster 61 Cpr49Ae FBgn0033728 FBtr0087920 2 1 1 90 2R 8291004 8291681 ACAACTATGCCTATGAGACGG 59 8291733 8291751 ATCACGTCACTGGAGTCTG 59 NA Drosophila melanogaster 61 Cpr49Ad FBgn0033726 FBtr0087955 3 1 1 80 2R 8279075 8279154 TTTGAAGCTGTTCTCCTGC 58 8279013 8279034 AGATAGGGATTGTATTGAGGCT 58 NA Drosophila melanogaster 61 CG30203 FBgn0050203 FBtr0273303 1 1 1 87 2R 8199347 8199365 CAATTGTACGTGGCTGGAG 58 8199413 8199481 ATCTGAGGACATATACGATGGT 58 NA Drosophila melanogaster 61 CG34231 FBgn0085260 FBtr0112424 2 1 1 80 2R 7873602 7873621 CAAACGTCTGGAATACTGCA 58 7873661 7873781 GCAACTGTATAAACCTTGACAG 57 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 3 2 2 68 2R 7869874 7869956 GTACACAAGCGTAGTGCTG 59 7869824 7869842 CAGGTAGTCAGCTATGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30037 FBgn0050037 FBtr0088049 1 1 1 113 2R 7867882 7867902 TTATCCTAGCAGTGTTCTTGG 57 7867731 7867749 AATCGGCTACACTTCTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 1 2 2 80 2R 7837687 7843103 TATACAAGGAGCACATTCAGGA 59 7843144 7843162 CGAAGACGATCACTTTGGC 59 NA Drosophila melanogaster 61 CG13189 FBgn0033665 FBtr0088038 1 1 1 60 2R 7787680 7787698 TTGTACGGAGTATACGCCT 57 7787722 7787740 CGAAGATCGATCCCAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088036 1 1 2 73 2R 7779891 7781085 GTGTAATCATCCAACATGGGC 59 7781120 7781138 TTACCGGAATCGACGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 deltaTry FBgn0010358 FBtr0088124 1 1 1 60 2R 7243134 7243152 GTCCTCCTTCAAGAACCAC 57 7243176 7243194 GATGGCAATGTCGTTGACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 3 2 2 81 2R 7220174 7220299 TCATCTACTAGCGGAACCG 58 7220344 7220362 TTTGTACTTGGCAATGGCG 59 NA Drosophila melanogaster 61 Cpr47Ed FBgn0033601 FBtr0088188 2 1 1 110 2R 7149176 7149291 TCGCATTGCTATTGATCTTGAC 59 7149087 7149105 TAAGTTGTTCGGTCACCGA 59 NA Drosophila melanogaster 61 CG34223 FBgn0085252 FBtr0112416 3 1 1 81 2R 7123446 7123525 CCACCTCAAAGTTCAGTTCC 58 7123566 7123587 GAAGACGACTAAAGACAAGACG 59 NA Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088199 2 1 2 69 2R 6797462 6797481 AAATGTTCGCTTTGAGCGAG 59 6797578 6797596 TCATCAGCCACGGTTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34222 FBgn0250822 FBtr0112415 1 1 1 80 2R 6207869 6207961 TCAATTAAACGGGATGCGTC 59 6207808 6207828 CATTTCTGTCTAAGTCCTCCG 58 NA InUTR Drosophila melanogaster 61 CG12913 FBgn0033500 FBtr0088335 2 1 1 88 2R 6141453 6141471 GATTGGAGCAAGCTAGGAG 57 6141523 6141655 TAAAGCTTTGGCCCTACTG 57 NA Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675 3 1 2 65 2R 5974531 5974552 GTTAGAGTGTAATTTGCCTCTG 57 5974441 5974461 CAACAATAAACTGAGTGGCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1599 FBgn0033452 FBtr0089394 3 1 1 111 2R 5729057 5729078 GACGAGCTTAAAGACATTATGG 57 5728845 5728922 ATGCAACGGAATTATTGCTC 57 NA Drosophila melanogaster 61 CG1665 FBgn0033451 FBtr0088478 2 1 1 114 2R 5728363 5728454 AAACGCTCAGAAGCTATCG 58 5728532 5728550 TTGTCCTCCACATACACGA 58 NA Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 1 2 2 80 2R 5491678 5491760 CGTTCAGGAATATTCGCCA 58 5491804 5491822 AATGTGACCCATTCGTGTG 58 NA Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 1 1 2 64 2R 5476751 5476822 CTGACTTCGGCGTTTAGTG 59 5476850 5476868 TCACCCGTCGTCTTATTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42600 FBgn0261016 FBtr0301879 1 1 1 80 2R 5481259 5481903 GCACCAGTAGCAACTTCTC 58 5481197 5481215 CACTTATAGCGTGAGAGCC 57 NA Drosophila melanogaster 61 wun2 FBgn0041087 FBtr0088506 2 1 1 80 2R 5304231 5304250 ATCCATATCGAGACTCCACC 58 5304291 5304372 CCACAAGCATCACAGTAAGAG 59 NA Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 1 1 1 60 2R 5283350 5283434 AGAGAATCAGTATGTCCACGA 58 5283310 5283328 CACTTCATGCCCGATAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rme-8 FBgn0015477 FBtr0088618 1 1 1 80 2R 5060970 5061048 AGTAAAGGATCCGATTGAACTC 58 5060911 5060932 GTCATTTGGTCATCATTTACGC 58 NA Drosophila melanogaster 61 alc FBgn0260972 FBtr0088624 3 1 1 89 2R 5023207 5023284 GATACACCGCTATCGTGTG 58 5023136 5023154 GCCATCCTTGATAGACAGG 57 NA Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 1 2 2 80 2R 5002676 5002752 GACGAATTACTTGTTCGAGTCG 59 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 Dbp45A FBgn0010220 FBtr0088564 2 1 1 153 2R 4976934 4977018 ACCAAATGGAAGCTTTGTATCG 59 4977132 4977150 AACCTCGCACTGTCTACAG 59 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643,FBtr0088642 3 2 2 85 2R 4782909 4782933 CGCTACATCTGGTACTTTATTAAGG 59 4782976 4783052 TCGTCTTTGTTGTAGCCCA 59 NA Drosophila melanogaster 61 whip FBgn0250827 FBtr0112411 3 1 1 60 2R 4250193 4250214 TGAACTTCTCTAGAAATCACGC 58 4250154 4250172 TTCCAATCTTCAAGGCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14755 FBgn0033282 FBtr0088738 2 1 1 72 2R 4235800 4235818 GTGAGTCGAACAGCATTGC 59 4235854 4235872 TTTGACCACTATCGCTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2183 FBgn0033273 FBtr0088789 2 1 1 82 2R 4055558 4055576 ACCTTTGCAAATACGGACC 58 4055622 4055703 GCGTTTCACCTTATCCGAG 58 NA Drosophila melanogaster 61 Vps28 FBgn0021814 FBtr0088825 3 1 1 75 2R 3967257 3967276 ATACCTGGTGCAGTACAAGG 59 3967201 3967219 CTTAACGAACGTCTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883,FBtr0088884 2 2 2 144 2R 3818907 3818925 CAACTCCATAACGCTGTGG 58 3818721 3818801 CACATAGTTCCATTTCACGGT 58 NA Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 3 2 2 85 2R 3721686 3721705 TTAGTGTGGAGTACCATGTG 57 3721751 3721828 AAGACTTCCATCTGATCTGTG 57 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 1 3 3 143 2R 3479247 3479265 AGGATCCTTGTGAGCTGTC 59 3479369 3479454 CAGCTAAATGTTGTTTCACCTC 58 NA Drosophila melanogaster 61 Corin FBgn0033192 FBtr0088909 3 1 1 81 2R 3448109 3448127 CGTGAGGAATCTGCATCCT 59 3448171 3448252 GTACGTGGATTTGGGATCCT 59 NA Drosophila melanogaster 61 CG2144 FBgn0033187 FBtr0088904 3 1 1 81 2R 3408331 3408349 TGATCTGCTCTCCGAATCC 59 3408394 3408464 AAGGGATGTCGATGTGGTC 59 NA Drosophila melanogaster 61 Gadd45 FBgn0033153 FBtr0089049 2 1 1 155 2R 3137204 3137222 CGAGAACGACATCTACGTG 58 3137340 3137359 TAGTCGACTAGCTGGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 1 3 3 159 2R 3106665 3107971 GATAACGAGGTTCGTTACTGTC 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 ubl FBgn0022224 FBtr0086211 3 1 1 107 2R 2697784 2697802 AAGAAACTAATCGCGGCAC 58 2697630 2697718 GTGAATTTCATAGTCAGATAGGCG 59 NA Drosophila melanogaster 61 Cyp6a2 FBgn0000473 FBtr0086133 3 1 1 106 2R 2667757 2667845 GTCATCTCAGAAACCCTGAG 57 2667670 2667688 CCCTTCTCAATCACAAGCT 57 NA Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 2 2 2 97 2R 2561685 2561774 TATTCGCAGTGACGAGTCTC 59 2561834 2561852 ATAGGCAAAGGCGTAGTCC 59 NA Drosophila melanogaster 61 Bap170 FBgn0042085 FBtr0086107 2 1 1 90 2R 2525434 2525455 TTTCATCAGGAGAATCATGCAC 59 2525505 2525694 GAATGTTGCTCCATCGTACG 59 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 2 4 4 142 2R 2515179 2515259 CCATCAAAGTACTCACTATACAGG 58 2515060 2515078 AACAGTCTAGGCTGCTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15233 FBgn0033076 FBtr0086155 2 1 1 86 2R 2488434 2488452 TTGTCTTGCTCTTGATGCC 58 2488121 2488247 CGATGTAACCCTTTAGGTCC 57 NA Drosophila melanogaster 61 CG34200 FBgn0085229 FBtr0112393 1 1 1 113 2R 1645322 1645425 GTTTCAATGGATGCTGGTC 57 1645502 1645520 TAGTACTCTTAGGCTGGCC 57 NA InUTR Drosophila melanogaster 61 CG17337 FBgn0259979 FBtr0086038 1 1 1 93 2R 1586851 1586933 GAGTACAAGAAAGACATTGGTG 57 1586987 1587005 CAGAAAGACTGGGATAGCG 57 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 2 2 2 112 2R 1394204 1394273 ATTGAGAATCCTTAGGAACGC 58 1394112 1394132 GTGGTTCTAATTTCTGACCCA 58 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 1 2 3 85 2R 1182499 1182517 AAGTGTTCGCGTCCTAGAC 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 CR9337 FBgn0032898 FBtr0081448 1 1 1 82 2L 20863077 20863219 GAAATCCTGACGAAGTCGG 58 20863013 20863034 CCTAGGTATGTAGATGACTGGG 59 NA Drosophila melanogaster 61 CR33315 FBgn0053315 FBtr0081172 3 1 1 60 2L 19075278 19075296 CTACGACGTATTCCACCAG 57 19075236 19075255 AACCCATCAAGGTTTCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 3 2 2 80 2L 16840568 16841352 ACCTAAGCCAGATGACGTC 59 16841395 16841414 GGTTACCCATCAAAGTGCTC 59 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 2 3 3 95 2L 22959942 22959962 AATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 3 2 2 102 2L 22168194 22168212 ATGCCTCTCAATCAGGGTG 59 22168057 22168131 ATATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 CG31702 FBgn0051702 FBtr0085934 2 1 1 61 2L 22072544 22072611 ATACCACGGGATTGGTTCC 59 22072634 22072654 CCAAGGGCTATTGAACTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1428 FBgn0032967 FBtr0085929 1 1 1 60 2L 21906437 21906458 ACAGAGTGGTTTGAAAGAAAGG 59 21906476 21906497 TGTTCACAAAGACTACTTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999,FBtr0085908 2 2 2 66 2L 21773018 21773037 TATCAGTGTGGGACATGTGG 59 21766132 21766155 GGCTAATCTCATGAAGTTTAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 His2B:CG33882 FBgn0053882 FBtr0091886 1 1 1 60 2L 21503278 21503297 AGAAGAACATCACCAAGACC 57 21503237 21503255 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39b FBgn0041245 FBtr0081522 1 1 1 133 2L 21368923 21368941 CAGCAGGTTCTGGTAGAGG 59 21368177 21368827 CCAATCAAGACACTCTGTCG 58 NA Drosophila melanogaster 61 CG31627 FBgn0051627 FBtr0300424 3 1 1 158 2L 21173700 21173719 ATAAAGTTGAGATGGAGCGC 59 21173837 21173914 GCTTAAGATGCATTGGAATCTC 58 NA Drosophila melanogaster 61 CG10949 FBgn0032858 FBtr0081367 1 1 1 80 2L 20416211 20416229 TCTCCAAGAACCTAGCAGC 59 20416092 20416167 TGTAGCAAAGTTCCTCCGA 58 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 1 2 3 85 2L 19166351 19168110 CAGTAAAGCTGTTACTCCTAAAGG 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 CG17344 FBgn0032755 FBtr0081152 1 1 1 273 2L 19102055 19102073 AAGGACACCAATTTCGGTC 58 19102369 19102391 CCATCTCAATCGGATAAACTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL13 FBgn0032720 FBtr0089318 1 1 1 295 2L 18858454 18858961 CACCCAATGAATGACTGCG 59 18858177 18858195 CGGATTTGATTCGTGACGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG10343 FBgn0032703 FBtr0081098 3 1 1 81 2L 18703592 18703612 GCGTTGCAGTCAATATACGAG 60 18703652 18703740 CCTCTTCGCCATATTTGTACTG 59 NA Drosophila melanogaster 61 CG10338 FBgn0032700 FBtr0081096 2 1 1 81 2L 18697684 18697705 TCAGCTTAAGGAGAAATACTGG 57 18697747 18697834 GATTAGCCAACCCTCTTGC 58 NA Drosophila melanogaster 61 CG18563 FBgn0032639 FBtr0300902 2 1 1 145 2L 17457935 17457953 GTCCCTATGGAGAAGTGCT 58 17457684 17457766 GTAGAAGATGATGCAGACTCAG 58 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 3 4 4 81 2L 17418040 17418059 TCAAACAGATGGCCATAGCT 59 17417633 17417999 AGTTTCAGCTCCACATTAACAC 59 NA Drosophila melanogaster 61 CG15140 FBgn0032631 FBtr0302408 3 1 1 98 2L 17286557 17286679 CTACTTCAGGTGAAACCCTG 58 17286740 17286758 TATTCATTCCATTGGGCCG 58 NA Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 3 1 1 102 2L 17182588 17183039 AAAGTACTCCCAACCGGAG 59 17183102 17183123 GATATCCTGGTGGACATTACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12620 FBgn0032626 FBtr0080953 1 1 1 60 2L 17088024 17088042 TGAGTTCTCAACGGTCGAG 59 17088066 17088084 CGATGACTCTGTGAACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 1 2 2 82 2L 16844728 16844746 CCAGGGTATCAACCTGGTG 59 16844605 16844685 CTTTGTACTGGCTCTCAATCTC 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080846,FBtr0080847 1 4 4 199 2L 16314849 16322968 ACTACGATGGAGAACGCTG 59 16314607 16314625 TTCCAGGTTCAGCTTCTCG 59 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823,FBtr0080822 2 2 2 82 2L 16238089 16238166 CAAAGATGATCTGAACTGTGGTC 59 16238208 16238226 AGATGAGCAGGTTCACCAG 59 NA Drosophila melanogaster 61 CG15267 FBgn0028862 FBtr0080707 2 1 1 83 2L 15251280 15251354 TTTGAAATAGCCTGGTTGGA 57 15251400 15251418 TTCCGATTCGAAGATGAGC 57 NA Drosophila melanogaster 61 Sfp35C FBgn0259965 FBtr0300311 2 1 1 205 2L 15201974 15202047 AGTTATTCTGGCCTGTATGCT 59 15201730 15201748 TCTCACAGAACCCAGACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15269 FBgn0028878 FBtr0080704 2 1 1 131 2L 15110512 15112096 TCTGAAACTCTGCAGGCTC 59 15112191 15112209 AAACTCCTTGGTTCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 l(2)35Bg FBgn0001977 FBtr0080725 2 1 1 123 2L 15037974 15038062 TGTGGAAATTGTTATCTCGGC 59 15037871 15037893 GTTAAATGTCGGATTTCAGGAGG 59 NA Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080693 3 1 2 145 2L 15005860 15005966 ATACGTAGAGACGGCTTCG 59 15006075 15006093 AATATCTTCCCGTCCGGAC 59 NA Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080693 2 1 2 95 2L 15005859 15005966 AATACGTAGAGACGGCTTCG 59 15006024 15006042 TCTGTACGATCACCTTGCC 59 NA Drosophila melanogaster 61 CG33090 FBgn0028916 FBtr0080624 3 1 1 81 2L 14334505 14334524 AAAGAGGATCCAGAATGTGC 58 14334568 14341322 GTAGTAGGCCGCATATCTG 57 NA Drosophila melanogaster 61 adat FBgn0028658 FBtr0080573 1 1 1 133 2L 13810517 13810593 CCCAGAAGAATTAAGGCCCT 59 13810403 13810427 CCAACTCTAGAAATGTAAGGAACAG 59 NA Drosophila melanogaster 61 CG31847 FBgn0051847 FBtr0301009 1 1 1 116 2L 13497430 13497512 TCTCATAGGATTGGGCCTG 58 13497592 13497610 GCATCAATCTTGTTGCCGT 59 NA Drosophila melanogaster 61 spict FBgn0032451 FBtr0080397 3 1 1 99 2L 12705083 12705599 CTTCTGACAATGGGTGTGG 58 12705662 12705680 AGATGATAACACTCAGCGC 57 NA Drosophila melanogaster 61 CG5435 FBgn0032431 FBtr0080387 3 1 1 91 2L 12430338 12430356 AAATCATTTCGGGTGTTGC 57 12430181 12430283 TCTTTACAACCGCCTATGC 57 NA Drosophila melanogaster 61 Cry FBgn0005664 FBtr0080281 3 1 1 159 2L 11944236 11944998 TGAAACGGACATACTTGTTGC 59 11945117 11945137 TTATCATCTCGGTTCAAAGCG 58 NA Drosophila melanogaster 61 CG14937 FBgn0032377 FBtr0080264 2 1 1 105 2L 11793936 11794033 CGATACAGAACCCACTGCA 59 11793849 11793869 CAACCTGCTAATCTGGAACTG 59 NA Drosophila melanogaster 61 CG14070 FBgn0032313 FBtr0080177 3 1 1 96 2L 10901261 10901279 GATAGACGAGGGCTTGGAG 59 10901127 10901146 CAGATAGGCAAACAGTTTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17118 FBgn0032291 FBtr0080111 2 1 1 82 2L 10730366 10730443 ACAACTGGTCTTCCTATACCA 58 10730487 10730505 CATTATCTCGAGCACCAGG 58 NA Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 3 2 2 129 2L 10383794 10383877 GGCGACAATGTATTTCCAC 57 10384031 10384051 TGTCGGACAATATCAGTTCAG 57 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 2 3 3 81 2L 9957835 9957854 GAGATTCTCAGGGAGCAGAC 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 1 2 2 85 2L 9940568 9940649 ACTAAACTCAACAGAAATGGCC 59 9940695 9940713 CCTTGGATTCTTCTCCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 1 1 1 61 2L 9938492 9938569 GGTACGACGAGAAGGATCTG 59 9938450 9938470 CACCTGATAATTCAGGGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 2 1 1 161 2L 9937711 9937729 GACAGTCAGTACTCCGAGC 59 9937421 9937439 GGCTTCCTCTTCGATTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13121 FBgn0032145 FBtr0079922 1 1 1 109 2L 9770966 9770984 GAGGAGTCCTACTATCGGC 58 9770597 9770895 CAGATAGCTTTGGCATATCGA 58 NA Drosophila melanogaster 61 Fbp2 FBgn0000640 FBtr0079808 1 1 1 80 2L 9427187 9427208 ATTGATGTGATGATCAATGGCG 59 9427248 9427327 CATGCCAGTCAGATTCATGC 59 NA Drosophila melanogaster 61 Try29F FBgn0015316 FBtr0301665 1 1 1 60 2L 8998817 8998835 TTTAATCGCTCAGGGTTGG 57 8998858 8998877 GAGTATCGCAGATCCTTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 2 3 3 81 2L 8944285 8944303 ACCATCTGATTCCATCGCA 59 8944157 8944240 CAGTCAAGTCCCTCATCCG 59 NA Drosophila melanogaster 61 Acer FBgn0016122 FBtr0079685 2 1 1 80 2L 8522952 8523448 CATCTCAGTTGAATGGTCACC 59 8523490 8523508 CCAGTTGTCGCTCAAAGTC 59 NA Drosophila melanogaster 61 CG8419 FBgn0031999 FBtr0079589 1 1 1 80 2L 8208387 8208459 CTTGATTTGGAGAAACGCAC 58 8208502 8208520 TACATCAGCACCAATCTCG 57 NA Drosophila melanogaster 61 CG7102 FBgn0031961 FBtr0079559 2 1 1 80 2L 7884705 7884724 GTGCGTTAAGACTAATGCCT 58 7884571 7884664 TCCAAGCAGAAATAGTCTGAG 57 NA Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 2 2 2 121 2L 7823093 7823467 GAGGATAGGTTTATTATCGAGGAG 58 7823547 7823565 TTCTTCACCAGCACATCCT 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462,FBtr0079461,FBtr0079460,FBtr0079459,FBtr0079458 2 5 5 112 2L 7455129 7455211 TGTATTTCACGATCAGCGG 58 7455035 7455053 GAAGGTCTCACAGCAAGAG 57 NA Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 3 2 2 146 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312951 7312969 CTTGTGGAGATCTCGACTG 57 NA Drosophila melanogaster 61 CG13773 FBgn0042092 FBtr0079372 3 1 1 185 2L 6907124 6907241 AGCTCCAAAGAACAAATCCA 57 6906958 6906976 GTCTTTGTAGTGTCACCGT 57 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 1 3 3 80 2L 6770387 6770405 CATCGAATTCTCCAGCCAG 58 6770261 6770346 AGTTTGTTATCTGGTGTCTTGG 58 NA Drosophila melanogaster 61 CG9500 FBgn0031804 FBtr0079280 1 1 1 84 2L 6357383 6357457 GCACTTACAGTAATCTATTCGGC 59 6357321 6357339 CAAGAATGCCAGACGATGC 59 NA Drosophila melanogaster 61 CG9222 FBgn0031784 FBtr0079201 2 1 1 114 2L 6131674 6131751 CGAGACCAGTCATAGGGTG 59 6131827 6131847 CTTGAATAGCGTACGTGACTG 59 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 1 3 3 80 2L 5769935 5770022 GGCACCCAGAGTATTTCCA 59 5769873 5769892 TCCTGTAGCTCTGTCTTGTC 58 NA Drosophila melanogaster 61 CG11030 FBgn0031736 FBtr0079135 1 1 1 91 2L 5759281 5759299 AGCCCGTTTATTACGATGG 57 5759354 5759438 CATGGAAGACGTAATGGCC 58 NA Drosophila melanogaster 61 GluRIIB FBgn0020429 FBtr0089577 1 1 1 80 2L 5560523 5560656 AGGAGTTCCCACCTTATTCG 59 5560696 5560717 GAATTCCTGCATCTTGATACCA 59 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 3 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 1 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG15635 FBgn0031617 FBtr0300354 2 1 1 60 2L 4643961 4643981 AGGAATATACCCTCCATCCAC 59 4644002 4644021 TCCACCTTGACTTAGTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089268,FBtr0089271,FBtr0301863 1 6 6 121 2L 4295614 4299078 TATTCCAGAAGACGCCGTG 59 4299163 4299181 TCACCTTCTTGTCCCACTG 59 NA Drosophila melanogaster 61 Art2 FBgn0031592 FBtr0077476 2 1 1 82 2L 4279135 4279154 TGTTGAAGGATTCAGTCCGA 59 4279014 4279090 ATCCAGGACAGTCTTGTGC 59 NA Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 1 1 1 102 2L 4227733 4228013 GTTGCACGTTTCCTCTGTG 59 4228079 4228097 TCTCGATGGTGTCAGAAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ed FBgn0000547 FBtr0077465 2 1 1 81 2L 4074701 4079510 TTCCGGCTATAGACTCGAC 58 4079553 4079573 ATTGTCACGGTTATAGGACAC 57 NA Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 2 1 1 282 2L 3469212 3469230 TATTCTTCACCGGTTCAGC 57 3468896 3468967 TTCTCAAAGAACTGTCCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3285 FBgn0031522 FBtr0077586 1 1 1 80 2L 3330993 3331011 TTCGCCAATCCGAATTGTC 58 3331053 3331134 GAAGGTAGCTATGTTCAGCAG 58 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608,FBtr0077609 2 2 2 80 2L 3276462 3276541 TGATAACGGGCATGATCCTC 59 3276401 3276419 TGTCCAGATCCATCGAGTG 58 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 1 3 3 91 2L 3017841 3017862 CGGATTATTTATACCACCTGGA 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 aph-1 FBgn0031458 FBtr0077716 2 1 1 89 2L 2766629 2766647 CATCCTGGCCTATGTCTCC 59 2766700 2766777 CCGGGACCACTCATATCAG 59 NA Drosophila melanogaster 61 CG15390 FBgn0031419 FBtr0077764 1 1 1 60 2L 2374809 2374887 CTTACATCACATAAGGCACTTGG 60 2374904 2374925 GATGTGAATTTGTTCAAGCTGC 60 NA DesignNoJunction Drosophila melanogaster 61 CG31679 FBgn0051679 FBtr0077809 3 1 1 106 2L 2237966 2238052 CAAGTTATATCCGATGTTATCCACC 59 2237884 2237903 TCGGTGATAATACCAGCTCC 59 NA Drosophila melanogaster 61 CG15382 FBgn0031393 FBtr0077832 3 1 1 60 2L 2156105 2156124 CCAAATCCGAGACTTCAGTG 58 2156147 2156165 ATTGGAGTCCTCGTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 3 3 3 70 2L 1985521 1985539 AACCGATACCGCTACTACG 59 1985400 1985489 TTCTTCAGATCCTCGATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077915 3 1 2 126 2L 1613141 1613159 CGGTTACTTTCAAGTGGCG 59 1612978 1613052 ATCACACGTTGATCATCAGC 58 NA Drosophila melanogaster 61 CG31935 FBgn0051935 FBtr0077916 3 1 1 82 2L 1595532 1595609 CTCAAACTAGCTGACATTCTAAGC 59 1595473 1595491 CAGAGATCGCTGAGAAGCT 59 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 1 1 2 241 2L 1344515 1344588 ACCTTTGCGCAGATAAACAG 59 1344792 1344810 ATAGGATCCGAAGTTGCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33922 FBgn0053922 FBtr0091926 3 1 1 136 2L 1343756 1343774 ACGTAACCGTAGATGGCTG 59 1343578 1343661 CTTATCCAGAATGATATCGTGGTC 59 NA Drosophila melanogaster 61 robo3 FBgn0041097 FBtr0077921 2 1 1 93 2L 1287040 1287169 TTGGAAGATGTTCCGGAGG 59 1287226 1287244 TTGGTTGTGGAGGTAACCA 58 NA Drosophila melanogaster 61 Tgt FBgn0031321 FBtr0077971 2 1 1 114 2L 1184242 1184328 TGATGACCCTAAGGCACAG 59 1184406 1184424 AGAATCTGGCAGTTCAGCT 59 NA Drosophila melanogaster 61 CG14443 FBgn0029880 FBtr0070949 1 1 1 60 X 6529441 6529462 ATTGATCGCATGATTGATGTGG 59 6529482 6529501 GTAGACGGCATAGTAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pat1 FBgn0029878 FBtr0070945 2 1 1 116 X 6489266 6489357 TTGATATAAGCCTGCGTCTG 57 6489433 6489454 GCGCATACTTCAAATACTTCTC 58 NA Drosophila melanogaster 61 CG3703 FBgn0040348 FBtr0070187 2 1 1 84 X 836819 837342 GGACTCAATTCCCATTTGC 57 836753 836771 TGTCTGCTGAGTAGTACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG31998 FBgn0051998 FBtr0089145 1 1 1 80 4 222109 222129 ATTCACATGATAGGGATCGTC 57 221992 222069 TCTTTAACAGGTTGGGAATCG 58 NA Drosophila melanogaster 61 BG642167 FBgn0250831 FBtr0110770 1 1 1 71 3R 21632230 21632248 TTCCTTTCAGCATCAGGCA 59 21632414 21632434 GAATCCGTATCATCCTTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33341 FBgn0053341 FBtr0084613 1 1 1 80 3R 20194684 20194702 AATCGCAACATTACCACGG 58 20194743 20194822 CAATGCCAATCAATGAACTGAG 58 NA Drosophila melanogaster 61 Rim FBgn0053547 FBtr0301555 2 1 1 80 3R 13715496 13716197 GACACCTCCTATCTCTTACGTG 59 13715437 13715456 CGGCGGTGATAAATGATCTG 59 NA Drosophila melanogaster 61 mus308 FBgn0002905 FBtr0082662 2 1 1 80 3R 8532938 8533011 TCAATATGTGCCAGACATTCG 58 8532878 8532897 CGTAGCTGCTATAACCACGA 59 NA Drosophila melanogaster 61 CG31389 FBgn0051389 FBtr0082419 3 1 1 69 3R 7467651 7467670 TTATTGCCCAACGGTTAGAC 58 7467701 7467720 GCAGATTTAGTTTCAAGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 3 2 2 82 3L 19904553 19904574 AAGATAAGCATACGCCAAACAG 59 19904616 19904689 GGTTTCAAGGGCTCATTTGG 59 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 1 2 3 91 3L 15104079 15104197 GGTTCAAGTTGTCCCACAC 59 15104252 15104270 CCTGTGGCTTTGAAGATCC 58 NA Drosophila melanogaster 61 CG6372 FBgn0035915 FBtr0076638 1 1 1 84 3L 8611591 8611668 GATTGCCTGTCAATATCCGAG 59 8611714 8611732 TTGACCATGTCACCTGGTC 59 NA Drosophila melanogaster 61 Eaf6 FBgn0035624 FBtr0077126 3 1 1 89 3L 5600777 5600918 GCTATATGCAATCCTGAGCG 59 5600707 5600730 GGTGTTCTGATTGATTGAGATCTG 59 NA Drosophila melanogaster 61 CG3803 FBgn0034938 FBtr0072208 3 1 1 80 2R 19840904 19840985 CCAGAGTACAAGCTAAAGAATGTG 59 19840847 19840866 CATCCTGTGCATGTACTCCA 59 NA Drosophila melanogaster 61 CG11170 FBgn0034705 FBtr0071786 3 1 1 60 2R 18065418 18065436 TTCAATCCAATGCAGGACG 58 18065376 18065394 ACACGCAAACCTTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15065 FBgn0040734 FBtr0086667 1 1 1 62 2R 14277496 14277514 GAAGTGGATGTCCTTGGTC 57 14277540 14277624 TTTAACGGAGAAGCCACTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Tango8 FBgn0040737 FBtr0086763 1 1 1 64 2R 14199327 14199345 ATGGCAATAACTGCAGCAG 58 14199371 14199391 GCACAGCAATACTTGTTTAGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG5859 FBgn0025830 FBtr0087036 1 1 1 80 2R 12741181 12741199 CTCTGCTGGAGTTCATCGT 59 12741242 12741329 TGCCCATCATAGAAATCGCT 59 NA Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 3 2 2 228 2R 7413964 7413982 AATGGAGTCCTCGGATGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 1 1 1 135 2R 4482146 4482371 AACATGTTCTGCAAGCTGC 59 4482029 4482047 GCGCATTATCACAGATGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30380 FBgn0050380 FBtr0088881 3 1 1 90 2R 3827040 3827058 CGTAACTGCGCTATTGCTC 59 3826968 3826987 ATCATTGGGATCGTAGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TepIV FBgn0041180 FBtr0081254 3 1 1 81 2L 19552892 19552966 TTGTGAAGGCCAAGTTCAC 58 19553008 19553029 AATTCCGGTTCTTGATGATCTG 58 NA Drosophila melanogaster 61 Dhc36C FBgn0013810 FBtr0080985 3 1 1 80 2L 17506726 17506887 GTGGATAAGATTTGGAAAGAGC 57 17506928 17506946 CATCTTGTCGATTTGCACC 57 NA Drosophila melanogaster 61 CG13386 FBgn0032040 FBtr0079661 2 1 1 95 2L 8399364 8399456 CAGTGTGGGTCCTTATGGA 58 8399515 8399533 TACTCGTAGGGATACGGGT 58 NA Drosophila melanogaster 61 CG13693 FBgn0031235 FBtr0078126 1 1 1 71 2L 233146 233226 AAAGAAATGCCATGACCGA 57 233261 233279 TTTCCTCACTTCGAAAGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11454 FBgn0031224 FBtr0078116 3 1 1 60 2L 143400 143419 AGCAAATGTATAGTGGTGCG 58 143437 143460 CTGTAACCATCTATGTTCGTTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 2 3 3 80 3L 19809755 19809832 AGGAGATTAAGCACCTCGTC 59 19809694 19809713 GAAAGTTGCCATCCAGTTCG 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 1 4 5 81 2R 2503184 2503202 GAGCTGGAAGCTATCTCCA 58 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 vas FBgn0003970 FBtr0080701 3 1 1 83 2L 15068863 15072348 CGAGGATGGTGATGAACGT 59 15072395 15072413 CGTTCCTCCCGATCTAGTC 59 NA Drosophila melanogaster 61 CG15841 FBgn0046212 FBtr0100526 1 1 1 87 2L 11591447 11591465 ATCAGCACTTCTCAAGGCT 59 11591378 11591396 TGTTGCCATGTTAAGACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RSG7 FBgn0024941 FBtr0074350 1 1 1 80 X 16736540 16736624 ACCTTCTACAGATTCCAGACG 59 16736480 16736498 AAGGTAGACGGCATAGTCC 58 NA Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0089908 1 1 2 82 2L 12713576 12713657 CCAACTACGTTTCTTCGCA 58 12713512 12713530 CACATAGCCATACTTGCGG 58 NA Drosophila melanogaster 61 Fcp3C FBgn0000644 FBtr0070542 1 1 1 80 X 3067747 3067770 GGAATTGGATCATATGTTTCCCTG 60 3067618 3067710 TGTTGTACGATCGTCTCTAGG 59 NA Drosophila melanogaster 61 CG9461 FBgn0037760 FBtr0082155 3 1 1 85 3R 5632296 5632314 CAGTCCGATTATGCGAGAG 57 5632128 5632248 TCTCAAAGTAGCCCATTCCA 58 NA Drosophila melanogaster 61 CG15747 FBgn0030474 FBtr0073766 2 1 1 60 X 13233288 13233308 ACAACATAGATGCCGATTCTG 58 13233329 13233348 TTCTCGTCTTCTTCATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 3 4 4 87 3L 13903644 13903662 AGAGCACGAGAAGAATGCA 59 13903307 13903593 ATCTGAGTCATTGCTGGCT 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 1 3 13 89 3R 11120956 11121154 ATGAGAGCGAACGGATACG 59 11121207 11121225 CTTGCGCTAACTGGTTCTC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2179 FBgn0086666 FBtr0091922 3 1 1 61 X 658019 658037 TTTGCGATAAACTGCCAGC 59 657976 657997 GTTGTTCCAGAAGTTGTTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111189 2 1 2 110 X 22363681 22363699 GGAACTCAACATGTACCCG 58 22363286 22363607 GGACTAATGCTCGTGACCT 59 NA Drosophila melanogaster 61 CG1503 FBgn0031157 FBtr0077260 1 1 1 68 X 20976666 20976684 AAACAGTTCATCCTGGTGC 58 20976346 20976364 AATCACCAGTAGGGACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 3 2 2 107 X 20127882 20127900 CAGAGCCTGTGTTCTTCGA 59 20127050 20127812 CATAGCCACCATTGATCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 1 2 2 209 X 16692991 16693233 GATCAACATGCGGATAACGA 58 16692801 16692819 GTCCATTCGGATCCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9672 FBgn0030777 FBtr0074361 2 1 1 258 X 16600839 16600857 TGGACTAATCCTTGTGGCC 59 16600508 16600526 GCCATTGTAGAGATCCACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG42512 FBgn0260238 FBtr0300651 1 1 1 80 X 16545984 16546007 CTATGTACTATTCCACTCGTTGTG 59 16546045 16546126 TCGCCGTATGGTAATTTGAC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG9784 FBgn0030761 FBtr0074289 3 1 1 60 X 16492127 16492148 GATTTCCGGATAACATATCCCT 57 16492088 16492106 TTATCCACCGTCACATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 3 3 3 199 X 16258648 16259240 GAACTGTTGCGTCAAGAGC 59 16259403 16259421 ATGAACAGTGTCTCCTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG8958 FBgn0030725 FBtr0074207 2 1 1 80 X 15978039 15978115 ATATCTAGCCCTGTCTAGTTGTG 59 15978153 15978173 TTCAACATATGTGGCTTCAGG 58 NA Drosophila melanogaster 61 CG3775 FBgn0030425 FBtr0073690 1 1 1 60 X 12697457 12697475 GATACCGAGGGACTACGAC 58 12697498 12697517 AATTTGTAGCTCCACTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15735 FBgn0030364 FBtr0073621 1 1 1 80 X 11913910 11913931 CTAAGAATGCTGATGTCAGTCC 59 11913971 11914055 AGGAGACTTCATTGTACCCG 59 NA Drosophila melanogaster 61 p24-1 FBgn0030341 FBtr0073604 3 1 1 72 X 11746493 11746514 GGCGATATCGATAGCATATCAC 58 11746361 11746460 TTATTCTTCCAGCAGCCTC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11697 FBgn0030313 FBtr0073511 3 1 1 60 X 11466991 11467012 TTTGATTATTTCACAGCGGGTC 59 11467032 11467051 GCACCTTGAACTCACTTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir10a FBgn0083979 FBtr0113487 1 1 1 66 X 11204525 11204543 TTTCACCATGCTACTGCAG 58 11203600 11203618 GTAGCTTCCATTCGCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 3 4 4 83 X 9674913 9675199 GAATGCCCATGATATTGAGGC 59 9675244 9675262 TTGTCCGAAAGGTTCACCA 59 NA Drosophila melanogaster 61 CG4198 FBgn0029753 FBtr0070750 3 1 1 61 X 5208143 5208161 CTACCAGGTGTCCATAGCG 59 5208252 5208270 TGTCCGTGTATTCATGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290005 3 1 2 118 X 3453209 3453228 GCTCATCATTCGAGTATCGG 58 3453308 3463862 CATTTATCGAAGGCGTCCTC 58 NA InUTR Drosophila melanogaster 61 CG14265 FBgn0040393 FBtr0070541 3 1 1 107 X 3130641 3130659 AGTCGTACTGATCTGTGCC 59 3130552 3130570 GTTGTCGAAGTGCTTGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2701 FBgn0024973 FBtr0070498 3 1 1 86 X 2612902 2612920 CTTCGTTGTGGACTACCAG 57 2612772 2612855 TCGTAGTTCTTGATATTTGGGC 58 NA Drosophila melanogaster 61 CG14054 FBgn0029596 FBtr0070338 1 1 1 104 X 1960048 1960066 CTGTACCGACTGGGATGTC 59 1959909 1959980 CAGATTTATCCAGCGCCAG 58 NA Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 2 2 2 112 X 1814943 1814961 ACTAGTGGCCATAAACGCA 59 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 CG5254 FBgn0040383 FBtr0070134 1 1 1 87 X 650464 650482 GCAACCACTCGATGTAGTC 58 650533 651849 ATTGTAGTGCACCTCACCA 59 NA Drosophila melanogaster 61 Su(Ste):CR42440 FBgn0259871 FBtr0300169 2 1 1 82 U 9697116 9697134 TACATCAGTTCGGAGCGTG 59 9697052 9697071 CAGGAGATATTCGGACACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42429 FBgn0259860 FBtr0300157 1 1 1 102 U 8043087 8043105 GAGCCCGTAGGTAACTAGG 58 8043171 8043189 CAATTGATCCAAGCTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 3 4 4 106 U 1179112 1179131 GCCATTAATAACGCAATGGA 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377b FBgn0083050 FBtr0113597 1 1 1 60 3R 26033271 26033291 AATTAATGCGGCTATCACTCC 58 26033231 26033250 AAAGTAATGCAGTAGCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 1 4 4 60 3R 26750244 26750262 GAAGAGATCGCCATGTGGA 59 26750285 26754872 GATTCTTGAACCACACCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9702 FBgn0039787 FBtr0085664 2 1 1 80 3R 26405685 26405704 TGTGGGACTAACCGTTATCC 59 26405745 26406078 GATCCATACAGGCCATACTCC 59 NA Drosophila melanogaster 61 CG7928 FBgn0039740 FBtr0085600 1 1 1 60 3R 25861844 25861863 ACCATGAGTGACTTTGACGA 59 25861803 25861824 CGCCATCGGATATTATGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmdelta FBgn0002734 FBtr0084954 3 1 1 60 3R 21823840 21823859 GCTCAAGGACATGAAACAGG 59 21823880 21823900 TAGATTAACTGGTTCTTCGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SMC1 FBgn0040283 FBtr0084541 1 1 1 80 3R 19886020 19886106 GACACTGTATTCAGATCTTGAAGG 59 19886142 19886163 GAGGCTTAACTTGCAGATAGTC 59 NA Drosophila melanogaster 61 Hsp68 FBgn0001230 FBtr0084589 2 1 1 60 3R 19882510 19882528 TAAGCGTGGAGTTCAAGGG 59 19882468 19882487 ACCATCGAGCTAATCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5933 FBgn0039139 FBtr0084532 2 1 1 92 3R 19858403 19858492 CAAGAGAAAGTTGGAAGTCGAC 59 19858545 19858563 AGGCTTGTGGACTCTTTCC 59 NA Drosophila melanogaster 61 CG10225 FBgn0039110 FBtr0084468 2 1 1 125 3R 19578285 19578432 AATAATGAAGCGTCAGTCGA 57 19578179 19578197 GGAACTATTGTTGGAGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 2 4 4 147 3R 18446765 18446783 AAGAAGTCCACTAGCAGCA 58 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 2 2 2 89 3R 17911579 17911966 GTTGCTACGACTGTAATCCAC 59 17911510 17911528 CGTTGTATCCACCTCCTCC 59 NA Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 2 1 1 94 3R 16569362 16569383 TCAGATGCTCAATATGCAAAGC 59 16569232 16569307 GAATCTTGCCCTCAAACCC 58 NA DesignNoJunction Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 1 2 2 80 3R 15681155 15681173 CCAACATACTCTCCCACGA 58 15681031 15681112 CAGCAAGGATAATTCGGCTG 59 NA Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083699,FBtr0083698 3 2 2 63 3R 14733236 14733254 CCAATACGTATCCGCAACC 58 14733280 14733299 AGCTTCTTCCCATAAGTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14302 FBgn0038647 FBtr0083673 3 1 1 137 3R 14558427 14558521 CATGAAATTCTTCAACCTGCTG 58 14558619 14558637 GTGCTAGTCGTACCATCGA 59 NA InUTR Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 3 3 6 87 3R 14079505 14079583 AGATTGGAGATCTGCCTGG 58 14079436 14079454 AAATACGACTGCGGAACCA 59 NA Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 3 2 2 81 3R 13837363 13837384 TGTTGTTAACTCACTACAGCAC 59 13837424 13837826 CTGCTGTTGGTCTCTAAAGAG 58 NA Nonspecific Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 3 2 3 111 3R 13219465 13219546 GTGAAGAAGATGGATCCTAGC 58 13219302 13219322 CGCAAAGGTAGAAATTGTGAG 58 NA Drosophila melanogaster 61 CG17562 FBgn0038449 FBtr0083329 3 1 1 83 3R 12442647 12442727 CATTAAGCGTTTAAAGCTGCTC 59 12442771 12442789 CTTACCAACGACCACAGTG 58 NA Drosophila melanogaster 61 sxe2 FBgn0038398 FBtr0083225 1 1 1 116 3R 11911737 11911756 CGGTACGATCTTTATACGCC 58 11911835 11911919 AATGGAGACCCTAACTGGC 59 NA Drosophila melanogaster 61 CG6966 FBgn0038286 FBtr0113236 2 1 1 99 3R 10908911 10908929 TACCACCAGGACGAATTCC 59 10908613 10908848 CACCTCAAAGTCTGCTCCA 59 NA Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 2 2 2 135 3R 8539855 8539929 ATAGCCGTGGTGTCATCAC 59 8539738 8539756 CCAATCAGGACATTGGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Hsp70Bb FBgn0013278 FBtr0082637 2 1 1 71 3R 8333115 8333133 ATTGGGCACATTCGATCTG 58 8333165 8333186 TCGAAGGTTACTTCTATCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Bbb FBgn0051354 FBtr0082636 3 1 1 93 3R 8329025 8329043 GAATCTCAAGGATGAGCGC 58 8329100 8329118 GAACAGAGATCCCTCGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10535 FBgn0037926 FBtr0082420 2 1 1 85 3R 7478491 7478588 TTACACAGGTGCTCTCGTC 59 7478637 7478655 AGAAGGAAGTGACGTCCTC 58 NA Drosophila melanogaster 61 CG6723 FBgn0037895 FBtr0082405 3 1 1 100 3R 7242615 7242696 ATGGAAATAGCGCTTTGGTG 59 7242534 7242553 GTAGGTAATGGCTCCTGAGG 59 NA Drosophila melanogaster 61 CG31386 FBgn0051386 FBtr0082359 2 1 1 80 3R 7120961 7131274 CTTATCCTGATATTACGGAGCC 58 7113222 7113241 GTTAAGCACGAGCTAAATGC 58 NA InUTR Drosophila melanogaster 61 CG31386 FBgn0051386 FBtr0082359 1 1 1 80 3R 7120960 7131274 CTTATCCTGATATTACGGAGCCT 59 7113222 7113242 GTTAAGCACGAGCTAAATGCA 59 NA InUTR Drosophila melanogaster 61 CG12950 FBgn0037736 FBtr0082170 2 1 1 80 3R 5563112 5563133 AGATGTCTACTTTGATTGCCTG 58 5562987 5563074 GATAAAGGTTGTTCGTTGTGAC 58 NA Drosophila melanogaster 61 CG9667 FBgn0037550 FBtr0081815 1 1 1 141 3R 3951657 3951737 GATACAGAATGCTGGCTTGG 59 3951535 3951553 CATCTTGGGACCATAGCGT 59 NA Drosophila melanogaster 61 CG10928 FBgn0040522 FBtr0081746 2 1 1 60 3R 3635306 3635464 GGCAATCACTTATGGAAATTGC 59 3635484 3635503 GAGCGAGTTAAATCGAATCG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3288 FBgn0037030 FBtr0078262 1 1 1 111 3L 20829519 20829537 GGGAATACCTGGACAGCTC 59 20829612 20829694 ATACGCATCACCGAAGAGG 59 NA Drosophila melanogaster 61 CG33912 FBgn0053912 FBtr0091916 1 1 1 149 3L 20748639 20748657 ATTTGCAAACGTTCAGTGC 58 20748440 20748529 CCAAACCGTATCTTAACTTTGG 57 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0302113,FBtr0074851 3 2 3 254 3L 20233188 20233206 TGCCTCGAACTATTACGGG 59 20231000 20232971 TTCACCTCCTCCACTTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG17147 FBgn0260393 FBtr0074824 2 1 1 87 3L 20216991 20217399 GACTCCTAACCTCAAACTTGG 58 20217448 20217466 CTCGTATTCACCGACACTC 57 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222 2 1 3 174 3L 17467927 17468005 CGGCAAAGTTTAAAGATCCG 57 17468142 17468160 ACATACCAAGCAGTTAGGC 57 NA InUTR Drosophila melanogaster 61 CG32176 FBgn0052176 FBtr0075218 2 1 1 121 3L 17427321 17427340 TCTGGAGGAGTTACTCTGCT 59 17427421 17427502 AGATGTGTTCTTCTTTGTGCTC 59 NA Drosophila melanogaster 61 CG13031 FBgn0036655 FBtr0075319 3 1 1 91 3L 16717993 16718067 GCAGCAAATGTTGATTCTCG 58 16718121 16718139 TAGAGGCCGAAGGAAACAG 59 NA Nonspecific Drosophila melanogaster 61 CG32163 FBgn0052163 FBtr0075310 1 1 1 60 3L 16580555 16580574 AAGTAACCACACCCTAACTG 57 16580596 16580615 TCTTTCCTGCGAATTTAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13062 FBgn0036603 FBtr0075368 1 1 1 109 3L 16307571 16307713 CAGTTGAAAGTAGTGTCGCT 58 16307785 16307803 TGGTGTGGATAGTAAGGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG13070 FBgn0036586 FBtr0075462 1 1 1 60 3L 16257111 16257131 TAGCATCAGTTTCAGCAAGAG 58 16257153 16257171 TTAACCCTTAGTCCAGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075485 3 1 2 61 3L 16206365 16206383 GTGATACGGTCCAAACAGC 58 16206322 16206340 GACTGTTGGATGTTGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 2 2 2 81 3L 16118876 16118962 CAGTTACTGGATAAAGAAATCCTGG 59 16118999 16119019 AACGAGCAATGCGTATAAAGG 59 NA Drosophila melanogaster 61 CG33986 FBgn0053986 FBtr0100031 2 1 1 60 3L 15517952 15517971 GATCCCATAGAGACTCCTCC 58 15517911 15517930 CCATGTTATTCGGATCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3868 FBgn0036422 FBtr0075729 3 1 1 63 3L 14394395 14394414 CTAATGCTGATCTGGTTCCC 58 14394055 14394369 TGATTGGCAGCCTTATCCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG3868 FBgn0036422 FBtr0075729 2 1 1 62 3L 14394395 14394414 CTAATGCTGATCTGGTTCCC 58 14394056 14394370 GATTGGCAGCCTTATCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 1 2 2 60 3L 13000410 13000434 GGGAGGAATATTTGATACCTTTGTG 60 13000450 13000470 GTACGGAATTCTTGTGTTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42588 FBgn0260965 FBtr0301717 2 1 1 80 3L 12815758 12815834 GGAATGAATTCGTGCAACG 58 12815876 12815896 TTTCAGGGATCTTCGAATAGC 58 NA Drosophila melanogaster 61 CG32113 FBgn0052113 FBtr0273390 3 1 1 80 3L 12749182 12749512 AGACATATCTAAGGTCCAGCG 59 12749549 12749572 CTGTATTGTCGAACTTCCTTAACC 59 NA Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 2 2 2 82 3L 12363092 12363110 GATGACGGAGGACTCACTC 59 12362376 12363048 GCGTAAACTCTCAATTTGCAG 58 NA Drosophila melanogaster 61 CG5718 FBgn0036222 FBtr0076069 3 1 1 60 3L 11916127 11916146 ACCTAGTTGAGACGCTAGAG 58 11916086 11916104 GCTGTAATGATGTGCACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PCID2 FBgn0036184 FBtr0076102 1 1 1 60 3L 11619873 11619891 GCTGAAGGACGAGAATTGG 58 11619915 11619933 GTACCTTAGATCCAGGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11714 FBgn0036170 FBtr0076156 1 1 1 93 3L 11515597 11515666 GAGTATCTGGCCCATTCGA 59 11515522 11515540 AAATGTGCAATCCGTGTGG 59 NA Nonspecific Drosophila melanogaster 61 CG7512 FBgn0036168 FBtr0302797 1 1 1 80 3L 11511468 11511557 GCAGGATAGATCCCACAGAG 59 11511599 11511618 ACACATAATCACACTTGCGG 59 NA Drosophila melanogaster 61 CG7600 FBgn0064766 FBtr0076165 2 1 1 112 3L 11205854 11205929 TATCACAGGCTATGGACCG 58 11206005 11206023 CAGAGTGCAGGATGTTCAC 58 NA Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 3 2 2 82 3L 11075551 11075634 GGACTTCAGAATATACCTTGTCG 58 11075491 11075509 AAATGGCATGTGCCATAGG 58 NA Drosophila melanogaster 61 CG11811 FBgn0036099 FBtr0076265 2 1 1 60 3L 10684863 10684884 CCACAAGATCATCAATAACGTG 57 10684904 10684923 GACAAAGTTGCGGAATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6674 FBgn0036063 FBtr0076354 2 1 1 144 3L 9964693 9964772 GATTACCAGGTAAACCCGC 58 9964567 9964585 GAGATTCGTTATCGACGCC 58 NA Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935,FBtr0076370 2 2 2 144 3L 9829027 9829045 TGATGCAGACCTTCCATCC 59 9828522 9828919 GCTATGCGGAGTTTCTCCA 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076543 3 1 6 159 3L 9055561 9057576 TCGATGAAATACGCAAACGT 58 9055421 9055439 GGAGCAGGTGGTACTACAG 59 NA Nonspecific Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817,FBtr0076772,FBtr0076773,FBtr0076774,FBtr0076771 2 5 5 80 3L 7895286 7895306 CATTTACAATTACGCGATGCG 59 7895152 7895244 TTGACCAGCTTTGTCAGCT 59 NA Drosophila melanogaster 61 CG16998 FBgn0035795 FBtr0076829 3 1 1 60 3L 7532557 7532577 GGGAGGAAATATTCAGGTGGT 59 7532517 7532541 GGTTCGTGGAAGTATATTAAGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10075 FBgn0035722 FBtr0076939 1 1 1 139 3L 6950559 6950577 GTTTGGCTACTCCTGATGC 58 6950371 6950456 GAAGGATTGTGAGCTCCCA 59 NA Drosophila melanogaster 61 CG8549 FBgn0035714 FBtr0076943 2 1 1 60 3L 6746312 6746330 AAGGTTCTTTCGTGGAGGA 58 6746434 6746452 TATGGGTTTGCAGGACCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18418 FBgn0035568 FBtr0073366 3 1 1 60 3L 4689741 4689759 TGCCGGACTATTGAGACAG 59 4689699 4689717 CTCCATCTGGTAAACACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302566,FBtr0302564,FBtr0302565 2 3 3 60 3L 4195909 4195927 GAGTGCCAATAATCTGCGC 59 4195951 4195969 CAGCACAATGACCATCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dpy-30L2 FBgn0035491 FBtr0073281 3 1 1 135 3L 4047634 4047653 GCAGTTAGAACTCTGTTCGA 57 4047382 4047400 GAGTTGGAGTCGTTCTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34259 FBgn0085288 FBtr0300030 2 1 1 108 3L 2027954 2028030 CTGGACTTGATGATCCTAACTG 58 2028099 2028117 CTGCCTCAAGTATGAGCAC 58 NA Drosophila melanogaster 61 5SrRNA:CR33448 FBgn0053448 FBtr0086440 1 1 1 60 2R 15618642 15618660 ATACATCGGTTCTCGTCCG 59 15618600 15618618 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 2 2 2 80 2R 19908839 19908914 CAGAAGATCGAGGAGGTGTC 59 19908778 19908796 CAGGTAGGACGAAGTCTCG 59 NA Drosophila melanogaster 61 CG13558 FBgn0034869 FBtr0072056 3 1 1 60 2R 19387632 19387650 CTTCAAGCAGCACTTCTGG 59 19387674 19387692 CTGCATCACTCGAATGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30265 FBgn0050265 FBtr0071891 1 1 1 80 2R 18720518 18720536 ACTGAATGTGGGAGTAGCC 59 18720578 18720659 AGAGTCCAATCGTATTCTGGA 58 NA Drosophila melanogaster 61 insc FBgn0011674 FBtr0071562 2 1 1 90 2R 16710759 16710777 TCCATCATGTCCAACGAGG 59 16710258 16710708 CGATTTGCTCGTAGAGAAAGAC 59 NA Drosophila melanogaster 61 CG15125 FBgn0034463 FBtr0086471 2 1 1 97 2R 15546239 15546257 CGGAGACTTCTGTAGGGAC 58 15546316 15546425 TTGACGGGTACTTAAATCCCA 59 NA Drosophila melanogaster 61 CG6362 FBgn0028740 FBtr0089556 2 1 1 94 2R 13659985 13660003 GGTCGTGGTCTTATGGAGG 59 13659750 13659927 TCGGCATCAAAGCAATTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10931 FBgn0034274 FBtr0089545 2 1 1 60 2R 13636708 13636729 AAAGTTTAGTTCGAATGGCGAG 59 13636750 13636768 GAGCTTAAGCAGCCTATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18432 FBgn0034238 FBtr0086943 1 1 1 81 2R 13428254 13428274 TCTCCAGATATCCATCAACGA 58 13428315 13428393 CTCGTAGAGCCATATGTTGAG 58 NA Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112691 3 1 2 80 2R 12842208 12842229 TCTAATACGTGAGGATTTGCAC 58 12842084 12842169 TCATCATCGGAATGAAAGTCC 58 NA Drosophila melanogaster 61 fidipidine FBgn0025519 FBtr0087185 3 1 1 82 2R 12150736 12150756 GTGGAGGACCAATTGAATACC 58 12150618 12150692 TCGAGGAGCTTTGGATCTG 59 NA Drosophila melanogaster 61 CG15708 FBgn0034099 FBtr0087188 2 1 1 199 2R 12129114 12129136 CTCTCGAAGATTAGCAAGATGAC 59 12128881 12128899 GAGTTCTCCAATGGACGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8187 FBgn0034027 FBtr0087355 2 1 1 81 2R 11428011 11428030 GTCTGGAGCTCAAGAATGTC 58 11427896 11427971 CCATGTACTCCAGTCATATTGAG 58 NA Drosophila melanogaster 61 Cyp6a23 FBgn0033978 FBtr0087452 3 1 1 120 2R 10764341 10764363 GATATTCAGGATCAACTTAGGGC 58 10764443 10764526 GAAGGGTTTCCATGACGAC 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 2 5 5 150 2R 9426600 9426618 AGTCAGCCGTCTTAGAGGA 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG30065 FBgn0050065 FBtr0087663 2 1 1 102 2R 9320793 9320811 ACTCGGAAACTTTGACCAG 57 9320937 9320955 GCCTAGTGCTTTGTAAAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8771 FBgn0033766 FBtr0302596 2 1 1 80 2R 8572003 8572083 GACAAGGCAACTATGTCAAGAG 59 8571944 8571963 TGAGTTTGTGCTGACTTTCG 59 NA Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 1 2 2 80 2R 8516770 8516845 GCAAAGATCAAAGAGGAACTG 57 8516710 8516729 AGAAGAGATCATGCTTTCGT 57 NA Drosophila melanogaster 61 Ak6 FBgn0033754 FBtr0087891 3 1 1 80 2R 8457111 8457200 ACATACTAATAACCGGAACTCC 57 8457052 8457071 GCCACTCAAACTTTAGTTCG 57 NA Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0301195,FBtr0087899 3 2 2 223 2R 8222844 8222862 ATAAGCCCAAGCAAACAGC 59 8223102 8223122 TGGATATGCTAAATCAGGGTC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8860 FBgn0033691 FBtr0088011 2 1 1 160 2R 8067270 8067288 TTGTCAAATTCGCCGAACC 59 8067128 8067147 AATCAGCTTGACGAAGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112426,FBtr0112425 3 2 2 63 2R 8052822 8052843 TGATAGTCTGAAACATGGTGGT 59 8052780 8052798 CTTTCGCTCAGAGTGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 1 2 2 200 2R 8041073 8041157 CTCTGGTTAAGCACACCGA 59 8041498 8041516 TCTCCGTCTCGTAGGAGAC 59 NA Drosophila melanogaster 61 Adam FBgn0027619 FBtr0088387 2 1 1 200 2R 5857700 5857782 CTATGCGTGAATCTGAGCG 58 5858009 5858029 GTCATAGTCTTCGGTGAAGTC 58 NA Drosophila melanogaster 61 Lcp4 FBgn0002535 FBtr0088744 3 1 1 87 2R 4325204 4325280 TTCAAGATCCTGCTTGTCTG 57 4325330 4325348 CTTGGACATCGTTGACCAG 58 NA Nonspecific Drosophila melanogaster 61 U2A FBgn0033210 FBtr0088941 3 1 1 60 2R 3563631 3563652 AGATTCCACAAATCGAGAACCT 59 3563592 3563614 GACAAGTCGATGGTATCAAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088906 1 1 2 83 2R 3422526 3422544 AAACGTAACTTCGCTCGAG 58 3422588 3422845 ACCGGGATGAGATTTAATTTGG 58 NA Drosophila melanogaster 61 Orc1 FBgn0022772 FBtr0088959 3 1 1 86 2R 3410769 3410850 TGCTGATGGGTAAAGTCAC 57 3410701 3410719 TAACGATCTCTTGCAGCTG 57 NA Drosophila melanogaster 61 Cyp9b1 FBgn0015038 FBtr0089056 1 1 1 91 2R 3015872 3015890 GAGCGATTTAGCGAAAGGC 59 3015703 3015817 TAGCGATTTCCAATGCAGC 59 NA Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262 2 1 2 109 2L 22015389 22015463 GTCAAGATCCGAGCAATCG 58 22015533 22015554 CATGTAGTGTGACTTTGAGAGC 59 NA InUTR Drosophila melanogaster 61 His2A:CG33820 FBgn0053820 FBtr0091824 1 1 1 60 2L 21463333 21463355 CTAGAATTATTCCGCGTCATCTG 59 21463374 21463393 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33807 FBgn0053807 FBtr0091811 1 1 1 60 2L 21432178 21432197 AGTTGAGAAGAAAGTGGTCC 57 21432220 21432238 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0110945,FBtr0081498 2 2 2 62 2L 21166945 21167023 GAAGGAGTAGATATACAAATGCGAC 59 21166907 21166928 AATCCTCTCCAGTTCATTTGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG17570 FBgn0260000 FBtr0081375 3 1 1 64 2L 20264224 20264242 AAGGACGAGGGCAATATCC 59 20264178 20264197 AAGTTCGCACTGATTTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40463 FBgn0058463 FBtr0100162 2 1 1 60 2L 20226475 20226496 CTGTGATCACGAATAGTTTCAG 57 20226516 20226535 ACTAAACTTAGCACGCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080777,FBtr0080775 2 5 5 85 2L 15729491 15729575 CATTTAGTCGGGAGATGGC 58 15729424 15729442 GAAGAATGGCTCCATCCAG 58 NA Drosophila melanogaster 61 CG16865 FBgn0028919 FBtr0080540 3 1 1 82 2L 13811692 13811710 TCAGGAGGAGTACAACGAG 58 13811756 13811834 GGGTGCAATCCAGAATCAG 58 NA Drosophila melanogaster 61 Vm34Ca FBgn0003983 FBtr0080521 2 1 1 178 2L 13411500 13411518 ATAAGATGCTCGGCTCCTC 59 13411340 13411359 GCTGAACAGGTAGTTCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15480 FBgn0032489 FBtr0080482 3 1 1 60 2L 13225182 13225202 CACCTTCGAACATGGATTACC 59 13225142 13225161 TTCTTGTGGGTGTAGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17036 FBgn0032449 FBtr0080408 1 1 1 80 2L 12699824 12699842 AGTTCCTACTCCAATCCCG 58 12699698 12699782 GGAGATCACTTGAACTTGACC 58 NA Drosophila melanogaster 61 CG34164 FBgn0085193 FBtr0112355 2 1 1 60 2L 12056425 12056509 TCAGACAAATATGCGGTGC 58 12056533 12056551 GATGCTTTAGCACCGACAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG6746 FBgn0032394 FBtr0080313 3 1 1 60 2L 12001997 12002018 TCAACTACTACATATTGCAGGG 57 12001958 12001977 GTATACTCCCACAACGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6488 FBgn0032361 FBtr0080248 1 1 1 80 2L 11497783 11497801 AGTTCTTTAAGACCGCTGC 58 11497663 11497740 GTCGCTGATCTTATTGTGCA 58 NA Drosophila melanogaster 61 YL-1 FBgn0032321 FBtr0080146 2 1 1 80 2L 10970813 10970831 TTTCGGATCAGGAAGAGGC 59 10970872 10970969 CAGGCTTGGTTTCCTTATAAGC 59 NA Drosophila melanogaster 61 Lip4 FBgn0032264 FBtr0080093 1 1 1 80 2L 10529736 10530086 CACACTTGAATACCTACAGTCTG 59 10530125 10530144 TGTATCCATCATCCGTCTCC 58 NA Drosophila melanogaster 61 Npc1a FBgn0024320 FBtr0079957 3 1 1 81 2L 10218274 10218294 AAGAAACGCTGTGGATTTCTG 59 10218154 10218234 TCTTATTAAGGAGCTCCACCTG 59 NA Drosophila melanogaster 61 CG3759 FBgn0032116 FBtr0079807 2 1 1 80 2L 9420808 9420832 GATAACAGTACTCTTAACAGCACTG 59 9420866 9423302 GTATTATCATCTGCTGATTCGCC 59 NA Drosophila melanogaster 61 CG32983 FBgn0052983 FBtr0079737 1 1 1 60 2L 8866537 8866561 CTGATCTACCTTAACTCATTTACCC 59 8866576 8866597 CAATCGTATTAGAGAACACGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp5 FBgn0011283 FBtr0079455 2 1 1 60 2L 7497294 7497312 CATTCTGGTGGCAATCGTC 59 7497252 7497270 CTCCTTCTCGTCAAAGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11319 FBgn0031835 FBtr0089641 1 1 1 80 2L 6577087 6577393 GATTGGCTGTACGAAGAGGA 59 6577026 6577044 GGCATACAGCATCAGTTGG 59 NA Drosophila melanogaster 61 CG3756 FBgn0031657 FBtr0078994 1 1 1 112 2L 4969124 4969142 GAGGAGTATCGGGTGAAGC 59 4969218 4969296 TCTTCGTCGTTTCTGACGA 59 NA Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0110812 2 1 2 101 2L 4456454 4456472 AGAGTGAGGAGAACTGCTG 58 4456061 4456389 ATATCCTCTCCGTGTCCAG 58 NA InUTR Drosophila melanogaster 61 CG15393 FBgn0031429 FBtr0077784 3 1 1 192 2L 2489979 2489997 TGATGGACAGCTGACAGAC 59 2489805 2489825 GATCCATTCATAGTTGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077963 1 1 2 60 2L 1166959 1166977 GCAACTTTCATCCCGACAC 59 1166998 1167019 TGTTGGGTAACGTTATAGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14339 FBgn0031301 FBtr0077954 1 1 1 80 2L 1112432 1112511 GTACGCCAAGATAGAGCCA 59 1112555 1112573 ACGGAGTCATAGTCGATGG 59 NA Drosophila melanogaster 61 CG3639 FBgn0031282 FBtr0078010 2 1 1 63 2L 816168 816186 TGATTTACCCGGCACTGAG 59 816211 816231 CATAGTTTAAAGTCCAGGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3544 FBgn0031279 FBtr0078007 1 1 1 60 2L 785308 785328 GAATGACTTTCTCATGCTCAG 57 785347 785368 TTTCTTTAGAGGCATCACTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11555 FBgn0086856 FBtr0078128 1 1 1 60 2L 274587 274607 ATCCTTATCGAAAGAAGGGAC 57 274628 274647 TCATTATGTGGCCCTTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31974 FBgn0051974 FBtr0300987 3 1 1 80 2L 141441 141460 TACAACGCCTTCATTCAGAC 58 141325 141401 TACCTCTTCGAGAAACAATTCG 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 2 3 10 95 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111110 112702 CAAACATGATACCCTGGTCAC 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 1 2 3 80 2L 199735 200131 GCCAGTCTGAATGATTCTACG 59 200172 200191 ACCTCGCATTAAATGATGCT 58 NA Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 3 2 2 288 2L 542544 542564 ACTTATACCTTTAGCGAGCAC 58 542226 542244 GTGTAATAGCAATGCCGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 2 1 1 101 2L 860338 860356 AAAGGTCCTAACGGAGGTC 58 860775 860793 TTCACATTGTCCGTGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 3 2 2 80 2L 1014709 1014790 ATCACATCTATGAGGTTCACCT 58 1014650 1014671 GGTTCTTCAGGTAGAAAGAACG 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 1 6 6 126 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 2 4 4 81 2L 1694369 1694387 CATGTACAAAGGCGAGGTC 58 1694432 1694555 ACCTTTGACCTGCAAACTC 58 NA Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 3 1 1 111 2L 1705025 1705043 TTTAAGATCGGCCCTGCTC 59 1705402 1705421 CACAGTCCATCTGCATTTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 3 3 3 90 2L 2229501 2229520 TCGATGAGGCACTTAAACAC 58 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 2 3 3 108 2L 2866730 2866820 CTGGAAGACCAAGGTTCCA 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 2 9 10 124 2L 3502123 3502430 CTGCTTTCCAATGCGAAGG 59 3502017 3502037 TCGTAGGTGAGAATAGTGTCG 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 1 5 11 178 2L 3626210 3626348 AAGCAGAGAAGGATGGACG 59 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 CG2816 FBgn0031564 FBtr0300299 3 1 1 97 2L 3703776 3703794 TTGATTCCGCACCATTCAG 58 3703907 3703926 GCATAGCTCTCAACGTATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 2 3 3 83 2L 3722007 3722360 ATGCAGCCAAGACTATTGG 57 3722407 3722425 TATCGGGATGGGTCTTCAG 58 NA Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301 1 1 2 105 2L 3916856 3916874 GACAGCTATCAAGTGCTGC 59 3915088 3916787 CAAGTGGTCCTGACTCTCC 59 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0077481 2 1 6 113 2L 4190818 4193321 CGATGTTAAGAGGAGTGGC 58 4190723 4190741 GAAAGATAGGCCAGATCCC 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 1 5 6 80 2L 4192682 4192703 ACCTTAAAGACAACAACCACAG 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 3 1 1 72 2L 4826527 4826547 ACCGATAATTCTCCATTTCCC 57 4826641 4826660 AAATATGCCTAGCGTTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 1 2 2 82 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872352 4872512 AGAAATTGTCGTTCCCGGA 59 NA Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 1 2 2 80 2L 4933956 4934027 CGAGCTCAAGCAGAAATACC 59 4933895 4933916 CAAACAATGACGAAGAGTAGGG 59 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 1 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 3 2 2 80 2L 5735109 5735127 CAGGAACCAATCTTTGGCA 58 5734811 5735068 GAAGAAGACCATGGTCATTACC 58 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079151,FBtr0079152 2 2 2 124 2L 5923611 5923629 TACACGGAAGTCCGTTCAG 59 5923446 5923464 TTGCTGTTGCTGTAGAAGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 1 3 3 115 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 2 2 2 80 2L 6652431 6652503 GCTCATTAGAAAGGGATCTGG 58 6652545 6652563 GACCGTTAAGGACTTCGGA 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0079431 1 1 2 110 2L 7016519 7016537 CTCAAGCTACTATGCCTGC 58 7016365 7016448 CTATGTGAGTCAATGAAACTGC 57 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299537 3 1 3 142 2L 7234991 7237700 GAATGATTTCGAGGTGACTCC 58 7234869 7234887 CCTTCCACTCGATCTCGTC 59 NA Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 3 2 2 83 2L 7392131 7392149 TTTACACCTGCCAAACCAC 58 7392010 7392087 CATCTAGTTCTTGTAGCTGACC 58 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 2 4 4 80 2L 7444381 7444468 TCATTATCGATATGGAAGGGCT 59 7444509 7444527 TGTAATCCAGCAACATGGC 58 NA Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 3 2 2 90 2L 7475791 7475811 TTTCAACGGTTGTGAACTGAC 59 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 1 4 5 60 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079536 3 1 4 122 2L 8031300 8032072 CTGTGAAAGGATATAGCGTAGG 58 8032155 8032173 CTCTCCTGATCCTCTCCTG 58 NA InUTR Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 3 2 2 85 2L 8199957 8199975 TAAATCGACTGGGCATCGA 58 8200022 8200110 TATAGTGGCCAGCATAAAGCT 59 NA Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717 3 1 2 183 2L 8389265 8390108 TACTTAGCTCCCAATATGCG 57 8389101 8389119 GAACTCCTTCCTCGAATGG 57 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 1 4 5 80 2L 9535893 9535999 ACCACTATATCGATCACTCCC 58 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 3 2 2 88 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571746 9571852 CCTGATTATCCCTGTTGCG 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 7 7 83 2L 10259082 10259101 GTTGATATGTGGCTCAAGGA 57 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 2 6 6 80 2L 10398150 10398168 GTGCCCTTTGTGTATGGAG 58 10398210 10398289 AATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 2 4 4 80 2L 10414647 10414788 GTTGCTGTCAGAATCCGAC 58 10414832 10414850 CTCTCCAAGAGTGACGGTC 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 2 2 3 231 2L 10426914 10426933 GTTTATGCCGACATTCTGAC 57 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 1 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0080101 1 1 2 86 2L 10646544 10646626 CGCAGCTACAGGAAATTGG 59 10646674 10646694 GCGCAACTATCTGATCTTGTG 59 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 3 1 1 88 2L 10704072 10704092 GGCATAATGAAGACAGCTGTG 59 10704198 10704216 ACTAGAGATTGATCGGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 1 3 3 151 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 2 2 8 165 2L 12536412 12536430 GACCTTGACCGATGAACAG 58 12477157 12536283 TCCAGATGCACTTTCAGTC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 2 2 17 126 2L 12727003 12727021 AAATCGGCTCGAATCTGTG 58 12727111 12737410 AATGACGTGAAACCTTGGC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 3 2 17 137 2L 12726994 12727012 AAGCTTTCCAAATCGGCTC 58 12727111 12728592 GATACCCTGTAACAACTTGGC 59 NA Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 3 2 2 81 2L 13829396 13829414 CCGAGACATACACCTTTGG 58 13829264 13829352 GATAAGGCAATCTGGGTTCG 58 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080547 2 1 3 139 2L 13879585 13879603 GACTCCACAACGATTCTCC 58 13879704 13891317 GACTGTTCACAAACGAATCTG 57 NA Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 2 2 2 80 2L 13908723 13908741 CAATGTGGAGTTGCCTCTG 58 13908785 13908870 ATGGACAGCATGTTGTGGA 59 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0080610 3 1 2 97 2L 13990980 13991001 CAAATTGAAACGATTGAGCCTG 59 13990579 13990922 CATTCAGCTGTAGGCTGGT 59 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 2 5 5 70 2L 14616430 14616515 ATCTGAAGAACCTGGTGATCC 59 14616547 14616565 ATTGATTGCCTTCAGCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752 3 1 2 113 2L 15552776 15552794 TACTTGACTTGGGCCAGAG 59 15552869 15554525 GTTTATGGGTATTTGGCTGCT 59 NA InUTR Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 1 3 3 83 2L 16045892 16045910 GGATCCGAGAAGGAATCGG 59 16045955 16046035 GATTTGGCTCGCAATACTCTC 59 NA Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 1 2 2 96 2L 17479234 17479252 TTGAGTATGCACAGGGAGC 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 2 4 12 113 2L 17717920 17717940 TAGTATACAGCCTGACTGCTC 58 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 1 2 4 105 2L 18474947 18475164 TGCAGGATAGGATGAATTCCA 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 1 3 3 175 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117968 19117988 GGAAGTAGGCATGAAACTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800 2 1 2 82 2L 19643363 19644273 TATCTCACACGTAAATCCGC 57 19644318 19644336 AATAGAAGCTAGCAACGCC 58 NA Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 3 2 2 81 2L 20074332 20074787 CGGACACAACTATACAGTTGAG 58 20074272 20074290 CAGCTCGGTGATGTTTAGC 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 3 5 5 83 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355881 GATAAGCAAATCCTCGTGCG 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0299912 1 1 7 121 2L 21124607 21125357 AGAAATAGCCGAGGAGTGC 59 21126161 21126179 TATTGGCACGATCCGAGTC 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 3 5 5 80 2R 19469 19547 TGTGTAATCACTTCAGTTGAGG 58 19585 19606 TAAATCAAGGAGATCGTACTGC 58 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111300 1 2 5 98 2R 18622 18694 CCTCACAGATATGCATTAAGCC 59 18753 18771 CTGATTCCTCAAAGCAGCC 58 NA Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 3 1 1 77 2R 1541379 1541398 TGTATGGTCAAATGGAGTGG 57 1541490 1541508 TTTAAGATGTACGGGTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086116 1 2 3 139 2R 2556822 2556840 TATCCTGTTGCAGTGGAGG 59 2557000 2557018 GTACATGTCCTGCATGGAG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301423 2 1 7 104 2R 2611518 2612081 AAGAGGATGATGCGGATGG 59 2611432 2611453 TGGTCTTAACGAATGTTATGCC 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086137,FBtr0301423 2 2 7 106 2R 2625506 2625526 GTCAATGCCAAGATATTGCAG 58 2622407 2625007 TGCTGTTTGTCCATAACCC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 3 2 11 110 2R 2764805 2764824 AAATGCTACAAAGTCCGGAG 58 2764020 2764732 TCATAAACATACCCGTGGC 57 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 1 5 11 135 2R 2764827 2764845 CCGATCAGGCTGAATTTGG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 2 2 2 77 2R 2811097 2811115 GAAAGTCATCGTTACCGCC 59 2811156 2811394 TAGATGCGCTCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 3 2 2 91 2R 2864779 2864799 CTTCCCATGCTCGAAATACAC 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 1 1 1 76 2R 3167616 3167634 CTGCTCTCGAGCATAAAGG 58 3167737 3167755 ACTGGACTCTGAAGCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111075 1 1 59 80 2R 3250878 3250898 TCACATAGACATAACCGACTG 57 3249354 3250839 AATACCAGGTACTTTCCATCAG 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111071 2 2 59 81 2R 3225052 3225070 CGGGAAAGTATAGTTGCCG 58 3219876 3225011 CTGGGAGGTACATTAACTATGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111072,FBtr0111058 1 2 59 80 2R 3246777 3246797 GTGAAGGTCAAGAGATTGCTG 59 3236471 3246740 CTTGTACCATCTAGATATTGGCTG 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 3 2 3 67 2R 3330822 3330840 ATTATCGAGTCCCACGGAG 58 3330871 3330956 CACTTGAGGATGGGAAACC 58 NA DesignRelaxed Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0300481,FBtr0300480 3 3 8 93 2R 3362871 3362952 AATAAATGCAGGAGATCGGC 58 3361299 3361318 CGGTTGTGATGTGAAGATCC 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 2 3 3 144 2R 3479247 3479265 AGGATCCTTGTGAGCTGTC 59 3479371 3479455 GCAGCTAAATGTTGTTTCACC 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088935 1 1 3 83 2R 3616575 3616593 AATAGCATATCGGAGCGCA 59 3616452 3616528 AGTGCGGCATTCTTTAACC 58 NA Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 2 2 2 84 2R 3846784 3846863 TCAAGCATAGAGTGTTGACCT 59 3846720 3846738 GAGGCATCAATGCTTTCCG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325,FBtr0273327 3 2 4 111 2R 4376853 4380733 TATCAAAGGGTCCATCAGCA 58 4376761 4376779 TATGGATGTGACCGAGGAG 58 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 3 3 3 86 2R 4508173 4508247 TTACGAAGCCTTCCATTCGT 59 4508295 4508314 TAGTAGCAGTTCACCTTGGG 59 NA Drosophila melanogaster 61 sns FBgn0024189 FBtr0088635 1 1 2 83 2R 4720301 4720319 TGTTCTCGGTGATGTCCTG 59 4720365 4722465 GTTCAAGTCCTTTGGTCTCC 58 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658 3 1 3 84 2R 4842282 4842301 TATATGTGAAACGGACGGCT 59 4842348 4842473 GTGCAGACATCTGTAGCTG 58 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501 1 1 2 186 2R 4961787 4961805 TACAAGACCAATCCTGGCC 59 4961954 4962353 TCTTGCGCTCTAACTTACGT 59 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 2 2 2 116 2R 5095793 5095811 TGTTTGTGACCTTCGAGGA 58 5095963 5095981 CCAGGTACAGATAAGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0301511,FBtr0088603 3 3 10 113 2R 5146430 5146448 AAGGACAGGTGATCCAAGG 59 5143205 5146355 GTGGTATAACCTCCTGATCCA 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 2 3 10 81 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 3 3 3 84 2R 5323911 5323932 CATTTCAAACAAATTGGCCTCG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0301766 1 3 5 93 2R 5362693 5363607 AATGGACTTTGCCCTTTGG 58 5363664 5363739 GGCTTCGTTCTTGATTCGT 58 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299930 3 1 2 86 2R 5605398 5606568 CTCCTCCAGAGTTTGTTCG 57 5605330 5605351 TCCGGAAGATCTTCAATATCTC 57 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405 2 1 2 98 2R 5970822 5970917 GTCCGCAAAGGTGAATCTC 58 5970979 5970997 CATACTTCCTTGGTGACGC 58 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 2 2 2 106 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009868 6009886 GGTGTCAATTTCCACCTGG 58 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366 1 2 4 140 2R 6097602 6119537 CCATGACAGCTCAAATTGAG 57 6097481 6097499 GACACTGGTAGTTGACCAC 57 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088362 3 2 4 86 2R 6138638 6139441 CAACAACGAGAACAACAATGC 59 6138572 6138590 TTCACACGCATAATCCCGA 59 NA Nonspecific Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 3 16 17 82 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193033 6193051 GAAGTTGTATTTGGCACGG 57 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 2 2 4 84 2R 6358247 6358956 TGTATCGGACGGATATGACG 59 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 3 2 4 141 2R 6359168 6359188 TGACAAGTGTTTCACTGTCTG 58 6358239 6358721 ACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 3 2 26 95 2R 6419606 6419624 CATATGCAACATGGCAGCA 59 6393564 6419549 GCGTAATACTCAGATCTTGGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 3 5 12 89 2R 6449615 6449635 GACATTATCTTCACCGACCTG 58 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 1 5 12 88 2R 6449616 6449635 ACATTATCTTCACCGACCTG 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 1 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198 3 1 2 83 2R 6792307 6792325 TGGAATCATCGGCTATTGG 57 6792371 6792511 TGGGAAAGGATTTCATCCTG 57 NA Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 3 3 3 80 2R 7174167 7174241 GCATCAATGCAGGAAATTATGG 58 7174108 7174128 GGATTCATCTGTTAAGGCAGC 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 2 2 5 170 2R 7198801 7198821 GATAAATCCGATGCGTAGCAC 59 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 3 2 2 81 2R 7220174 7220299 TCATCTACTAGCGGAACCG 58 7220344 7220362 TTTGTACTTGGCAATGGCG 59 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 2 2 2 80 2R 7837686 7843102 CTATACAAGGAGCACATTCAGG 58 7843143 7843161 GAAGACGATCACTTTGGCC 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 2 6 6 154 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547877 8547966 GCTTGTTCTCACTGCTCAC 59 NA Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 3 2 2 101 2R 8668884 8671858 CTGAACCAACTCAGGGAGG 59 8671923 8671941 GATCTCGGAGATCGTCTGC 59 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 3 3 6 80 2R 8766204 8766564 ATACCAAGATCCCAACCAGC 59 8766143 8766161 CCCTGAGGTGGATATCCAC 59 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 2 2 2 95 2R 8825967 8826077 GATCGGTTTCACAAAGCCG 59 8826135 8826154 CGTCATGGAATCACTGTCCT 59 NA Drosophila melanogaster 61 AQP FBgn0033807 FBtr0087766 3 1 2 137 2R 9100462 9100540 CTAGTCGTGGCAGTTTACG 58 9100343 9100361 GACAATGATGTGCTCCAGG 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 3 5 12 80 2R 9310223 9326125 TCTCCTGAATACCTATGACGAG 58 9310164 9310184 AGGTTTATGATACGCCTCTCC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 1 5 12 80 2R 9310224 9326126 GTCTCCTGAATACCTATGACGA 59 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087700 2 1 2 80 2R 9378989 9379010 AGGCTCAGTTCTCAATTATAGC 58 9377369 9378949 CGATTGGTATCTTGGTGAGC 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 3 10 15 150 2R 9752989 9753575 AACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0301593,FBtr0301592,FBtr0301591 1 3 15 196 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758835 9759180 CCCTTAAAGCTTTGACGCC 59 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 1 4 4 122 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877015 9877037 CCACTGATTTAGCATCTTCATCC 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574 3 1 2 100 2R 10122020 10122039 GGATAAGTTGTCGGAATGGC 59 10121839 10121960 CATCTTTGGTTTCGACAATCTG 58 NA Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 2 2 2 80 2R 10151027 10151105 CTATACTCTGGCCCACTCC 58 10150965 10150984 TTGTTAATGGTGCGATTGCT 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 2 3 6 81 2R 10849115 10849136 GAATATCTCATACGAGGAGCTG 58 10848994 10849075 CCATTTGATGGTAAATGGCTG 58 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087403 2 1 2 104 2R 11099163 11099239 CTGTATCAGGTGGCAACCA 59 11099077 11099095 CTAACGTTTCTTGAGGCGC 59 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 2 2 2 94 2R 11743552 11743576 CTATAACGCCTTAAAGGATAAGGTG 59 11743627 11743963 CATATCCACCGCAAAGTGTG 59 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289 1 1 2 91 2R 11744058 11744136 GAGTAAGCCAGGCAATGTC 58 11744191 11744209 GGAGACGATCAAACACTGG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 3 2 13 102 2R 11856643 11856663 CGAAACTAGCTGTCTTGTGAC 59 11854016 11856583 GTCACGTAGATGGTAGTACTCTC 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089589 3 1 5 142 2R 12020009 12020027 TTCCTTCATGCTCTCCACG 59 12020133 12023542 ACCACCACATATCGTCCTG 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 3 5 5 83 2R 12093319 12093421 GTGAAGTGAAGAAGGCATATCG 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 1 2 2 83 2R 12153288 12153306 AACTCTATCAGGATGCCGT 58 12153351 12153431 GCATTACAACTGTCAGTTTCG 58 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 3 3 4 148 2R 12747151 12747173 GCGGATATGTCAAAGAGATTCTG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 3 7 9 81 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958997 12959240 CTTGAGCTTGAGTGTTATCACTG 59 NA Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 1 1 1 75 2R 12979978 12979996 GCAAGTTCTCTACTCCAGG 57 12980092 12980110 GACATAATCCGGGCAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110965,FBtr0086782 3 2 4 116 2R 14019050 14019068 CAAGCATCTGAGGAAGAGG 57 14018880 14018970 GTGGAGTTCGTCAACTGAG 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 1 3 8 80 2R 14311923 14311941 CATCACCGTCTGGAAGGAG 59 14311985 14312388 GTGCGTTGGTATACAGTGC 59 NA Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 2 3 3 60 2R 14546455 14546476 GTATCGATACGCTTTAGTCAGG 58 14546353 14546439 GAAAGTGCCTTGTATAAAGAGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 1 1 1 88 2R 14857642 14857662 CCAGGGAGCAAATTATCTACG 58 14857508 14857526 CAGCTTTGTACTGTGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0300482 1 1 3 80 2R 14913435 14913453 ACATTATTGCCAGGAAGCG 58 14911876 14913391 TGGTGCGATAGTCAGTCTC 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 1 5 6 80 2R 15048910 15048989 CCATTCTCAAGGTCAATGGC 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 1 7 10 80 2R 15295681 15295699 CGTCACAGACGATGAACTC 58 15295551 15295639 GTGTCGGTATATTCACCATGC 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 3 4 6 129 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319634 15319652 AACTGGAGTTCGAGCAGTC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 3 11 19 82 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361018 ATTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301505,FBtr0086450,FBtr0086455,FBtr0301506,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0100392 1 8 19 104 2R 15361451 15361469 ACGTTATTCCTGCAGAGAC 57 15365203 15366258 CTCTGGTTTGACCAGAGTG 57 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319 2 1 3 80 2R 16143737 16143957 ACAAACATCGGCTAAAGATCG 59 16143677 16143695 GATACAACGCGATCACTGC 59 NA Drosophila melanogaster 61 CG18067 FBgn0034512 FBtr0086216 3 1 1 67 2R 16422051 16422069 TTGGATTCTACTGGGCCTG 59 16422159 16422179 CATTTCGCTGTATATTCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 1 4 15 147 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 1 7 15 109 2R 16910991 16911009 CCAATGGACATGCAAGCAG 59 16911080 16911489 CAATTTGGACGTCAGTTCCTG 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 1 3 3 80 2R 17172237 17172255 TCTATCAGATGTGAGCGGA 57 17172298 17172373 TGATACATCAGCAGAATGGG 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 2 5 5 97 2R 17204978 17204996 CCTGTTGACGGAGATTTCG 58 17205055 17205131 GGCGATCAGAAATGTAATCCA 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 3 4 5 180 2R 17202255 17202336 CCGGTATCTGGAAAGACCC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 Tim10 FBgn0027360 FBtr0071677 2 1 2 81 2R 17578525 17578546 CACTTAGCTTTACTACATGGTG 57 17578465 17578483 ACAGCACAAATGCGTAGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 3 3 3 80 2R 18025744 18039164 TCAACCACTCACGATTCTG 57 18050415 18050435 AAGAGACGCATACTATGTTGG 58 NA InUTR Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 2 3 13 84 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817834 18819048 ATGGATTTGTCCTCATTGCG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 3 2 2 122 2R 19574387 19574560 GAAGCTGTACGATGTTCGC 59 19574646 19574664 TCTGATCCGAGTAGCTTCG 58 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 1 1 2 91 2R 19954749 19954767 AAATCTACGCAGTGGGAGG 59 19953827 19954694 AGCCCAGATTCATTCTGCT 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 2 2 2 80 2R 20447023 20447041 GAGGCCGAGAAGATACTGG 59 20446639 20446980 GAAATGCCAAGTGTCGACTG 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413 2 1 6 93 2R 20821644 20821662 ACCTACTCAAAGCGTCTGG 59 20817482 20821587 CAGCTGGAGTTACGATGCT 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 3 3 3 105 2R 20920194 20924125 CTCAATGCCGCTATTCAGC 59 20924189 20924212 GGCTCATCAGTTGATTTATAAGGG 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 1 5 9 89 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136024 136042 AACATTCTGCAATGCGGTG 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 2 2 6 82 3L 161362 167487 CATCAAATCGAAACTTTACGCC 59 167529 167548 TATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 2 4 4 80 3L 345202 345223 CTACGTCTATTCGAATTGCACC 59 345085 345162 GCGAAGAGATCATCACAACC 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 2 2 4 126 3L 452934 452954 GCGATCTTCTATTTCAAGCAC 57 451762 452846 ATTTCAGTATGTCGCCTCC 57 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 3 6 6 80 3L 998727 998837 GACATCGTCTGGATCTGAG 57 998665 998685 TGATCTCCTTGATGAGTAGCT 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 3 6 6 80 3L 998727 998837 GACATCGTCTGGATCTGAG 57 998665 998685 TGATCTCCTTGATGAGTAGCT 58 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 2 2 4 111 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346351 1346369 CATCCCGATAGCGATTCAG 58 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 2 5 5 99 3L 1635217 1635235 GATGATCATCATGGGCGTG 58 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072784 2 1 2 80 3L 1822028 1822047 GCAAATACAATGCGAAGACC 58 1822089 1822403 ACTGCTGCAAATAGTTCCAG 58 NA Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 2 2 2 121 3L 2373059 2373138 TGTAACATTGCCCAGGGAG 59 2372956 2372974 CCAGAAATCTGCGGAAACC 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 3 3 3 80 3L 3150146 3150226 ACTTTCAGGCTTTGTTCACC 59 3150267 3150287 TCTTTAGGTCATCGTACTGCA 59 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 3 2 2 80 3L 3179413 3179956 ATTTCTTGGCTGGAATCATGTC 59 3179995 3180015 GTGAATTATGTGGCCATCCAG 59 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 2 1 1 60 3L 3471947 3471966 TTCATCCTATTTGGAGCCGT 59 3471836 3471855 AATGCTTCAGGACTATGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 1 6 13 117 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593415 3593433 TCATCTCCTCGCGAATGTC 59 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0112845 3 1 4 81 3L 3834620 3836032 GCAGACGGTTCCATTTACC 58 3836077 3836095 ACTGGTATTGATTGCCCGA 59 NA Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073198 1 1 2 84 3L 4032071 4032090 AGCCATTTGTCTGTTCATGG 58 4032135 4032202 TTATCAGAACATGCCCAATGG 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 2 3 6 96 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095862 4095981 ACTGGTAGTATTCCTTCATCGAG 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 2 6 6 80 3L 4098072 4098091 AAATCTTCCGAGTCTCAGGA 58 4097790 4098029 ACGATCGAACGATAGTTGG 57 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 3 3 3 63 3L 4262982 4263002 CAAATGAATCCCTTGATCGGG 59 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 1 2 5 80 3L 4503454 4503539 AAATGCAGTAATCCCGTCG 58 4503392 4503411 ATGATAGTTGTACACCTGCG 57 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0112634 2 1 2 80 3L 5426260 5426279 GGCTACTATATGTGCCAGGT 59 5426322 5426404 AATATTTGGTGGCACGACC 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 2 3 10 81 3L 5535644 5535663 AATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091475 1 1 4 105 3L 5918409 5918505 CTGGGTACTAAATGCTGCT 57 5918571 5918592 GTTAATGTACTGGTTGATGTCC 57 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355 1 1 2 112 3L 6118570 6118589 AGGACGTTATGAGACAAGCT 58 6118413 6118495 GATGTTGTGTTGACTCGCT 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 3 6 11 81 3L 7005317 7005335 GCATTGGCAATGATTTGCA 58 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 1 2 2 80 3L 7061622 7061640 GTATGTGGTTCTCGACGTG 58 7061496 7061581 TACATCAGGAACATCATCACCA 59 NA Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 1 2 2 94 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124305 7124325 TGAAGAGACCGTAGAATTCCA 58 NA InUTR Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 2 5 5 99 3L 7333783 7333801 CAGAGATCGCATGTACGGT 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850 2 2 3 133 3L 7375822 7375895 GCAAAGAAAGTAGCTAAACCG 58 7376047 7376066 TTACGGTGATCTTTGGAACG 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 3 5 5 195 3L 8349036 8349117 TACTGCCTATAGAAGCTCGC 59 8348860 8348878 GAACTGGATATGCTCGCAG 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 2 4 5 180 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347120 8347138 CTTGTGAGAGTACCAGCGA 59 NA Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 3 2 2 103 3L 8418952 8419513 TTCGGTAACAGCACATTGG 58 8419580 8419598 ATAGTGGTCTTTAGGGCCA 57 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076629 3 1 5 98 3L 8576858 8579081 GCAATTATGTGTCGCTACCT 58 8579141 8579160 TATCCTCTAGCTGGGAATCG 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 2 2 5 80 3L 8574885 8574903 AGCAAATAGGGCAATTCCC 58 8574947 8579080 GGTAGCGACACAATCACTG 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 2 3 13 177 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631265 TACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 3 5 13 141 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630575 8630594 GAATGGCTCTGTAGGTTTCG 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302085 3 2 5 99 3L 8790237 8790255 AATCTCTGGTTAAGACCGC 57 8790318 8791230 GTGCGACGTAATGATTTGC 58 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 3 3 3 81 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923490 AAGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 2 1 1 91 3L 9347870 9347888 GATTATGGTTGCTCAGGCG 59 9348003 9348022 CATACAGGGATTCCGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 1 2 3 150 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574671 9574689 TTGAGCAACTCGATGTCCT 59 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 3 2 3 152 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574672 9574691 GATTGAGCAACTCGATGTCC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 3 4 12 115 3L 9774994 9775719 CTACCTGGGTAATTTGTCTGG 58 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 3 3 8 184 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824112 TATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 2 3 4 172 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856555 9856573 TGATCTCATAGACGGCTCG 58 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076352,FBtr0076350,FBtr0076348 1 3 5 252 3L 9966070 9966088 TGTTAGTATCGTCGCAGCA 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420 3 1 5 115 3L 10580735 10580754 ATGATCCCTTCTTAGCAGCC 59 10580985 10582464 AGCAGTGGCATTTAATATGGC 59 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 2 2 3 118 3L 10681693 10681793 TAGAGCTTTGGGACAAGGAC 59 10681874 10682037 TATTGTTGAAGGCTGCCAC 58 NA Drosophila melanogaster 61 Cpr67Fa2 FBgn0036109 FBtr0076192 3 1 1 83 3L 10884859 10884877 TCAGCCAATATGTTCCGCT 59 10885162 10885180 AGCTTCCTGGTTGTAGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 1 4 4 80 3L 11030771 11030790 CTTTGGCTTCCTGAAGTACG 59 11030644 11030729 GATTGGGCCAACTTATCCTC 58 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 1 3 3 96 3L 11051889 11051907 AATGACTATGTGGCCAAGC 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 3 2 2 80 3L 11195966 11196052 AGACTTGGAAGAGACAAACC 57 11195905 11195923 AGAAACTGGTCGAAGAAGG 57 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 2 4 4 81 3L 11780326 11780346 GGAAACAATGGTCATTCCTCG 59 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 3 3 4 89 3L 12558039 12558057 CTAATTACCAGGAGCTGGC 57 12534465 12538505 AGTGTAGAGCGGTATAGCC 58 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 2 3 5 141 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474447 ACCATCTGGGATATACTGGC 58 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290126 1 1 4 80 3L 13879286 13879305 GAGAACGCGATCCTTATAGC 58 13877884 13879182 AATCATCAGCAGTTACCGG 57 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 2 4 4 84 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901998 13902016 CAACACTTCTCGCAGAGTC 58 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 3 3 3 81 3L 14621498 14621575 GATGGAAGCTTAGGAGATGG 57 14621436 14621457 GATCGTTGTTTATCATCTGCAG 58 NA InUTR Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699 1 1 2 98 3L 14770509 14770528 AGATCTACGAAGGCTCTGTC 58 14770333 14770450 TTACTTGTACTGATTCGACGC 58 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565 3 1 2 121 3L 15577187 15577396 CTGCTAAAGGACGATACGG 57 15577481 15577499 AAAGTCTTGCCACAAACAC 57 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 3 2 6 157 3L 16108782 16108800 TGCTCAATTCAATGCTGCC 59 16108919 16110653 GGTCATAGACGATGGACTCTG 59 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 1 2 2 80 3L 16621685 16621778 GGAGCATCAGTTTGAGATACG 59 16621625 16621644 GGGTAACGAAGACTTTCCCA 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 1 5 7 80 3L 16952972 16954605 CAGGAGCTACCAGATTCGA 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 3 2 2 82 3L 17423270 17423288 CGAGATATCGCCCTTCCAG 59 17423149 17423225 TCATGTCATGACGTCTTGGA 59 NA Nonspecific Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 3 2 7 111 3L 17527654 17531772 AACAGTGATAACGACTCTGG 57 17531915 17531933 CGATTCTGACATACGGGTC 57 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0075111 3 1 3 118 3L 18595035 18595053 GAGTCGCAGTTGTCATTGC 59 18594769 18594959 CCTAGATCTTTCTTTAATAGTCGCC 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095,FBtr0075096 2 3 4 98 3L 18667331 18667351 TCACACCAGAAACTCTTTCAG 58 18667189 18667271 GGTTGGAGCATCAGATAGG 57 NA Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 3 1 1 81 3L 18716323 18716343 CTCGGCATTAAAGATTGTTCG 58 18716207 18716225 GTTGCTTGCGACTGTACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pip FBgn0003089 FBtr0075010 3 1 12 80 3L 19295087 19295106 AGCATTAAAGATCCGGAGGG 59 19294964 19295044 GTCGAAGGGTAGACACTCC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075007 3 1 12 127 3L 19300191 19300431 ATTTGCACGCATTTCAACTC 58 19300083 19300103 GGTATGTAGGCTTCTAACACG 58 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089594 1 1 3 80 3L 19810785 19810859 CAATATAATGGCCGATGTGGA 58 19810725 19810743 CCTTCGATCCATAGCTGGT 59 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074916 3 1 2 122 3L 19912610 19913261 CTCCAAAGATGTGGAGCAG 58 19912506 19912524 CCATTCATAACTCCCACGG 58 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 2 3 3 95 3L 19992456 19992474 CATAGCTCCGAAAGGACTC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 1 2 2 94 3L 20478512 20478596 TCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 1 3 3 80 3L 21257017 21257035 TCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 3 4 4 80 3L 21488575 21488712 AACGCAGACATTGATGTTCG 59 21488514 21488532 TCTGGCGAATAGCTACCAC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 1 3 3 119 3L 21719350 21719368 ATCATTCGCCCTCAAGGAG 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 2 3 3 80 3L 21832003 21832172 CGACTTTATACGAATGAATGCC 58 21831944 21831964 TTCGTGACCTTTATGTTCTCG 58 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 2 3 5 132 3L 21914315 21914334 ATGATCCGGATCTCCAACTG 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 1 5 5 84 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776574 22776593 GTGCTCGTTCATTTGATCCA 59 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0100184,FBtr0078581 3 3 3 113 3L 22791964 22791982 GAGAAGCCGTACAAGTGTG 58 22791546 22791564 GTTGGGCATAGGACAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 1 3 3 142 3L 22870964 22871044 TATAAGAGCTGCACAGGAGG 59 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 3 5 5 132 3R 66124 66142 TACGAGCAAGAGGACTTGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 3 2 2 89 3R 225227 225245 AACTTCCTGTGGGTTCCAC 59 225096 225176 AATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 3 2 4 81 3R 271102 271124 GTTGGCTAACTGGACATTATAGC 59 270274 271062 GCATGAACCATCCTTAACGT 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 135 3R 1119084 1119798 GAAAGTATTCTCAAGACGTTCCTC 59 1118972 1118990 GTCCATGGAGACCATGGAG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 135 3R 1119084 1119798 GAAAGTATTCTCAAGACGTTCCTC 59 1118972 1118990 GTCCATGGAGACCATGGAG 59 NA Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 2 1 1 93 3R 1560107 1560125 CTGGAACCTCAGTCCTTCG 59 1560248 1560269 GATCAGGTCGGAATTTAATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 2 2 2 194 3R 1561044 1561062 ATCTGGATGAGTTCGACCG 59 1560807 1560886 ACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 2 1 1 69 3R 2045357 2045375 GATCAAACGTGAGGACTCG 58 2044285 2044304 CACGTAGTTGTAGATCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 3 5 5 125 3R 2217058 2217076 GATCCAATGCACCAAGGAG 58 2216805 2216890 TCAAAGACAGCCTTGATGC 58 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 2 2 2 81 3R 3745625 3745646 GCTCTGGTGAAATTAACAACTG 58 3745505 3745586 CTTTCATTGTCGGCATATTCAC 58 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 1 4 4 80 3R 3848721 3848741 TCCTGAACGAAGACATAACCA 59 3848600 3848679 GGACAGATGCCAAGTTGAC 58 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081921 2 1 2 81 3R 4650604 4650688 TGACACGGATCATCCTAAGC 59 4650729 4650750 GTTGGACTTCTTAAAGATCCCG 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089784 2 1 8 128 3R 4656717 4657871 AACATGAGCGAAATGGAGC 58 4656607 4656625 CTCGTGTGGATAACGAGGA 58 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 2 4 4 93 3R 4871946 4872261 CATGAACTTGAACCAGGTGC 59 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 1 2 2 60 3R 5091840 5091861 TTAATAACCTGGAATTCGTGGG 58 5091743 5091762 TGGATGCGAATGATGTTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082041 3 1 3 83 3R 5284486 5286003 CCATAGCCAAGCCAATACTC 58 5284422 5284442 GTATCTCCTTCAGGTTCATCG 58 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 2 5 9 80 3R 5834565 5835033 CTACGAAGGTTCAAACCGAG 58 5834504 5834523 AGTCGGTGGATATCTCAGTG 58 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118 1 1 2 94 3R 6516215 6517080 CAGTCCTCAGTCGAAGCTC 59 6517138 6517156 ATTGGACCACGATGCTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314 3 1 2 99 3R 6579826 6579844 ATAACATCACGGTAGCTGG 57 6579571 6579764 AGGAACACCTTCAGTATGTG 57 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 2 6 7 181 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692405 6692539 GTTGTAGCAACCTGTGAAGG 59 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113219 1 1 3 82 3R 7029445 7029463 TGCAACTGGAATGGGAGAG 59 7029505 7032647 CCGAGTTAAATGAACCCATTCTC 59 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113218 1 1 3 82 3R 7031326 7031344 ATTAAGCGAGCCAACAAGG 58 7031389 7032639 AATGAACCCATTCTGGTCAG 57 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 2 4 4 83 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264018 7264036 GTCTAGCTTCATGGAGGCA 59 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 3 4 4 83 3R 7264083 7264160 CCAGAGTATCCTCAAGGAGG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082556 3 1 2 80 3R 7836016 7836034 TATTCGGCGAGAGTTTCCC 59 7835856 7835975 GATCTTCAACCTTTAGGGTGAC 58 NA Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 2 2 2 128 3R 8229470 8229490 CCCAAGTACTTTGAGAACCCT 59 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 2 1 1 68 3R 8252636 8252654 AAATGTGGACTTTACGGCT 57 8252790 8252810 GGAACATTTAGAGCAGAAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 3 6 6 80 3R 9204502 9204739 TGCCCTACATCTACAATCCT 58 9204441 9204460 GGTCCAGTTCACTTACATCG 58 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 135 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 2 3 5 80 3R 9582738 9582911 CATGATGTGCAGAATCGCC 59 9582953 9582973 CTGCTTCAAGTAGTCCAAACG 59 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 3 2 5 81 3R 9892802 9892820 TTACGAGTGGATGGTCCAG 58 9892864 9905076 TATGGAGTTCTTCCATCCGG 59 NA Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 3 2 2 93 3R 9945943 9946018 TCATTGAGAAGGTGGTAGCC 59 9945869 9945887 TTCTTGAGCACGTACAGCA 59 NA Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 2 2 2 99 3R 10132889 10132908 AGAACCTGGAGAAGATCGAG 58 10132743 10132827 ATGTGACCCAGATGGAAGG 59 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 1 3 3 89 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551644 10551774 GATGTTGATCGTCTCATTGGTC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 2 2 3 81 3R 11240682 11240830 GCCGTAGTAATTACCCTCCA 59 11240874 11240892 GCTGTTATCAACGGCTGAC 59 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 1 2 3 80 3R 11240682 11240830 GCCGTAGTAATTACCCTCCA 59 11240873 11240891 CTGTTATCAACGGCTGACC 58 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083153 3 1 2 112 3R 11366292 11366379 CTTATAAGATCTTGCCCAGAGC 58 11366201 11366219 GAAACATATGCGTGCGGAG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 1 2 8 88 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782597 AAATGCCAGAGCATCTTCG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 1 5 8 101 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 3 3 3 90 3R 11928092 11928112 GCTCCGGAAGTATTAGATGAC 58 11928164 11928245 GACGACCACAGATCATCTC 57 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 2 4 6 80 3R 12458425 12458445 GGAGTAGTCCATCTGATCCAC 59 12458487 12461282 GTTCTCAGCATTCTCCTGC 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347,FBtr0083349 1 2 6 83 3R 12558425 12558443 AGTGTCCTGAAGATCCGAC 58 12484787 12536295 CATTTGTACCTAGCCAGTCTG 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 2 2 4 149 3R 13308944 13309026 AATGTGAATGAACCCGCAC 59 13308813 13308833 GTTATTCAGATCGATGCGTCC 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089772 1 1 4 80 3R 13692946 13692964 AGGAGGACATCTATTGGCC 58 13693007 13694216 CTCGTATGGTCGTAACTTCG 58 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 3 3 6 87 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079435 14079453 CAAATACGACTGCGGAACC 59 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 2 3 6 87 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079435 14079453 CAAATACGACTGCGGAACC 59 NA Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582 3 1 3 168 3R 14205076 14205943 TTCACCGAGACAAAGATGGA 59 14204669 14204687 TCGTCTCCTTGACGATCTC 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 3 4 4 134 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981396 14981415 ATAACAGGGTTCTCGGACTC 59 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 2 4 4 81 3R 15444447 15444530 CATGAACACAGAGCTTAACTGG 59 15444387 15444407 CACGGAGCCAATAAAGAACAG 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492 2 1 3 81 3R 15464464 15464633 CCATGAAGGAGTCGTTATGC 58 15464402 15464422 TTATTGGTCAAGTAATGGGCC 58 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 1 2 2 85 3R 15477480 15477504 GCTATTCAGTAGCATTAGCAATAGG 59 15477547 15477677 TTCCTGTCCTATAGCGCAC 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 2 2 8 80 3R 16576466 16580695 GCTATGCTCATTCGATGGG 58 16580738 16580757 CGTCCGATAGTCGATAATGG 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084024 1 1 16 80 3R 17031764 17033350 AAGATTAGCTTGCCTGTCG 57 17036515 17036533 GAAGATCTGTGAGTCGTCC 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 2 22 22 81 3R 17202595 17202613 TTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084077 1 1 22 80 3R 17177602 17200793 CAGAGGCTCAAGGTACCTC 59 17177540 17177559 CATGTCTGTCGATTACCAGC 58 NA Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 2 1 1 61 3R 17206624 17206642 TCCCTAAGGAGCATCTACG 58 17207095 17207113 GTCACCTGGCTGTTATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 3 2 5 182 3R 17351005 17351023 ATCCATCGTTACGACCAGG 59 17351166 17351263 CGCGCCAAATAATAAGAAAGGA 59 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 2 2 2 87 3R 17566287 17566306 TCTACACGGCTATTATGGCA 58 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 3 2 6 106 3R 17643799 17643883 TCGGTTATCGTTTGAAGCA 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300008 2 1 3 81 3R 17957057 17958390 CGAATCAAATTTGAGGAGATGC 58 17958431 17958450 TCAATTCGGTTATCTCACGC 58 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 3 4 4 148 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446567 18446654 GAGTAGTTCATCTTGGTGCTC 58 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 3 4 4 80 3R 18614231 18614310 GTTTCTATGCGGATCCCAG 58 18614353 18614372 CTATGTCCTCCAGATTGCTG 57 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 1 2 3 80 3R 19350706 19351232 GTAAGATCTCTGCGGAAAGAG 58 19350646 19350666 TCGATACTTCTGATAGCGACC 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 1 2 2 133 3R 19655747 19655912 GGCATTAAGGGTCAAATCTACG 59 19656006 19656024 ATGATGTAGCCATCGGGAC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 5 6 80 3R 20045866 20045947 AGAGATTACTGGCTGCGTC 59 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 5 6 81 3R 20045867 20045948 TAGAGATTACTGGCTGCGT 58 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084615 1 1 2 80 3R 20195899 20196025 TATTATGATCCCGAGGATATGC 57 20196065 20196084 ACTGAAACCATCAAAGTGCT 58 NA Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 2 2 2 80 3R 20378365 20378626 ACTATTGGTGTGAGGCTACTG 59 20378668 20378686 TCTTGGAATCGTCCGAGTC 59 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 3 2 2 172 3R 20445819 20445903 TCCATCAACAGTGGAAATGC 58 20446181 20446199 CCGAGACTATGGTCGATGG 59 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084709 1 1 2 119 3R 20691280 20691298 TTATCCTGGCCTTGGTCAG 59 20691381 20691459 GGAATCTGGTGACCTCTGG 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 3 3 3 80 3R 20869766 20869841 CTTTCCGGAGTGTAAATGGT 57 20869705 20869724 TTGACTAGATCGATGACGGT 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 2 5 6 88 3R 21182007 21182025 CTTCATGTCTGTGCACACC 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 1 3 3 84 3R 21511212 21511297 ACTATTTGGATCACCCAGCT 58 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 1 4 7 85 3R 21580125 21580143 CATTCGATTCGTTTGCGAC 58 21575103 21580078 AAGTGGCCTCTATAAACTTGC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 2 4 7 85 3R 21580124 21580142 ATTCGATTCGTTTGCGACG 59 21575102 21580078 CAAGTGGCCTCTATAAACTTGC 59 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100012 3 1 2 82 3R 22175888 22181333 CGCATATGATCGGTCTACTG 58 22181377 22181396 GTCGGCATTATACTGCTGAC 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 3 4 9 162 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699586 22699604 TCTAGCGGCGATATTTGCT 59 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882 2 1 2 177 3R 22750976 22761692 CAACGAAGCCATCATATCCT 57 22761832 22761850 TGGCGATGATAATGAAGCA 57 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0085143,FBtr0112834,FBtr0085139 3 4 12 83 3R 22892899 22892917 AGGCCAAGGAGTATGAACG 59 22892378 22892855 TGTCCGTCCTATTAAAGAGGAC 59 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 1 5 5 126 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839 3 1 4 81 3R 24351015 24351600 GCTTAAAGCTAAGGACATCTGTG 59 24350956 24350974 AGTGTCGTAGTACCAGCTG 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 3 3 6 161 3R 24637863 24638121 TATGGAAAGTCCAGGTCGC 59 24638463 24638482 TCCTCTTCCTGAACCATGAC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 2 4 4 87 3R 24698368 24698446 TCTACAAGGCTCTAACTGCC 59 24698300 24698318 AGGAAGGTCAGAATCGAGC 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299743,FBtr0299751 1 2 13 80 3R 24736891 24745223 TTCATCGAGACAGCAAAGC 58 24745267 24745285 GTGATGGAGAATGTCTCCG 57 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 1 9 10 184 3R 24957540 24957858 TCCGAGATCTCAATCCCGA 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 3 2 2 86 3R 25065066 25065141 TACCGGCAAAGATGATTTCC 58 25064999 25065017 GAATAGGCGACCAGGTAGG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 1 3 5 103 3R 25309373 25309391 ATTTGAACCTGCTGAAGCG 59 25309458 25309689 TAGAGGAGCGACATTGCTG 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 1 3 4 80 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327143 25327161 TGGCCGTCATTAGATCCAG 59 NA Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 3 2 2 80 3R 25948594 25948613 TGGGTCTGGATTATCTGGTG 58 25948474 25948553 CTACAACTAATGGCTTCGGTG 59 NA Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 1 2 2 80 3R 26005220 26005306 GAAACAGCAAGCCAAATAATCC 58 26005344 26005365 AAAGTATCGGATTAACCTTGCG 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 3 3 4 88 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032364 26032382 ACATTCAGGTAGTTGTCGG 57 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 3 5 5 83 3R 26289003 26289023 CATCTGCTCTATGACATCTCC 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684 1 1 2 80 3R 26339730 26339749 CTCCTTCATTCGTCACATGC 59 26339617 26339689 TTCAACTCATCACGAATCACG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 2 2 13 82 3R 26421340 26421452 CCAAACGCAGATTAGGCAG 59 26421276 26421294 GATGACAATGTCCGAGGTG 58 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 1 2 4 87 3R 26643856 26643874 GTGGAAAGGAGAAATCCGC 58 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 3 4 4 117 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650761 26650779 CCTGAAAGCATCTTGCTGG 59 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085717 2 1 2 130 3R 26704770 26704869 CCCTATATTTGTGAAGTGTGCA 58 26704661 26704679 TTCACCATGTTGTTCAGCC 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 1 4 4 107 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 1 5 5 80 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427006 27427024 TCGTACCACATCTTCAGGC 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 1 5 5 80 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427006 27427024 TCGTACCACATCTTCAGGC 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 3 6 6 85 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554169 27554187 TCTTCATGATGGCTCACCA 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 2 6 7 82 4 470583 470875 AAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 3 3 3 80 4 499214 499233 AACAAACTCCCAAGTAGCCA 59 498699 499174 AGCTTCGTATACTGTACATCCT 58 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 3 3 6 92 4 637969 638983 ATTTAAACGTGACGACGCC 59 639033 639057 CGAATTCCCTTATAGCTTGATTAGG 59 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 3 3 3 87 4 663173 663196 GGATATCGGATTGTATAGTCACCA 59 663046 663128 TGGCTCTGACTCAAGAATGG 59 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600 2 1 2 80 4 844178 844196 TGAGAAGGAGCATTCCGAC 59 823943 844135 TCGTAATGAGCCTGACTGAG 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 1 2 5 144 4 886674 886692 CTTGTTCGATCGGAACTGC 59 886490 886566 AGGACGAGAGTTATTGCCA 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 1 2 6 97 4 978508 978642 ATTAGTGCCAGGTACTCGA 57 978429 978447 GTCTGCAATTCAAGTCGTG 57 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 3 2 6 99 4 978508 978643 GATTAGTGCCAGGTACTCGA 59 978428 978446 CGTCTGCAATTCAAGTCGT 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 3 2 9 142 4 1059054 1060650 AGTGCTCTTCAGCTAGACG 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 3 6 7 121 4 1081128 1081146 AAAGTTGCGAAGCTAGTCG 58 1080449 1081043 CTGCTTGATGGAACCTGAG 58 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 3 2 4 195 4 1207177 1207198 TCTTTCGGAAATGGATTACCCT 59 1208237 1208379 CCTTCTCAGGTATTGTAGATCGA 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 3 2 8 81 X 165640 167227 GGCAACAGCAATTACACCA 59 165577 165599 TATTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 1 8 8 85 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396249 396333 ACTCATTGTGAGCCAAGGA 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 1 2 4 87 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516382 516487 AGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 3 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 1 4 4 80 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 1 3 3 104 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237879 1237897 CCCAAGTTCTCGTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 arm FBgn0000117 FBtr0089990 1 1 5 89 X 1788603 1788621 ATAGAGCTGACCAACTCGC 59 1786144 1788554 TATCATATCCTGTAGATCGGGAC 58 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 2 3 3 87 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862014 1870614 CCTGGCATGTCACATTCAC 59 NA Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 1 2 2 105 X 2342607 2342625 GGGACAAGATCGTCAAGGA 59 2342694 2342833 TACTGTTTGCGGAGTCTGG 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 3 2 2 99 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024845 3024864 GGAAATCCATTGACCACAGC 59 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 2 3 3 69 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602942 3603880 GATTTGTTCTCTGAATTCCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 3 3 3 83 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372230 4372249 CTTCAGGATGTCATTGGCTC 58 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 1 4 6 117 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848233 4848252 GTCATTAAATCCGCGTCCAG 59 NA Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 2 2 2 146 X 5512503 5512608 AAGCCGGAATTGTACAAACTG 59 5512377 5512395 GTACTCGGAGCCGTATAGC 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070844 2 1 2 105 X 5611457 5611475 TTCGATATCCATGCCCTCG 59 5608837 5611389 GTCGGCTATAATCTCCTCGT 58 NA Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070870 3 1 2 172 X 5956895 5957119 AGATGACTCACGTCTTGGC 59 5957255 5957273 GGTAGGTGGACATGGTCAC 59 NA Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 1 2 2 80 X 6160489 6160508 CTACAAGGACCTCATATGGC 57 6153746 6160446 GATATCCAGAAACGCTCCA 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0301324,FBtr0112704 1 3 6 83 X 6481125 6482106 GCAGGAATATGAGAACGTCC 58 6482152 6482170 AAATGGTGTATCAGCGCAC 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 2 5 6 106 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 1 2 2 72 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002262 7002280 GATTGCCTACGAAACAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 2 2 2 82 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632462 7632482 GAGAGGGTGTAATCACTACCG 59 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 3 3 3 81 X 7852240 7852318 GTACGCCAACTAGAGGAGG 59 7852177 7852199 AGGCTAGAGTCTTGTACTTATCG 59 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071119 3 1 6 119 X 7938029 7938047 TAAATGTGGTAATGGGCGG 57 7937755 7937948 CCAGCATATTGGACATTTGTG 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 1 6 6 115 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 1 3 3 80 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236 1 1 3 80 X 8381660 8381680 TTGATTGCTGGAACGATATGC 59 8381017 8381624 CATACGGGACCTTAAAGTTATAGTC 59 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 3 4 4 81 X 8459190 8459423 GATACTGGGTCGAATCATTCAC 59 8459463 8459483 CACCAGATGTTCGAAGTTCTC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 2 4 6 88 X 8478536 8478554 TACTCGGAGATCCAGTCGA 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 CG32710 FBgn0052710 FBtr0071252 1 1 1 147 X 8713924 8713942 AAACAGCAGCAACTACAGC 59 8714662 8714680 AGCACTTTGTTGCGTAACC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 3 2 2 185 X 9823082 9823214 AACTCTTCGCTGTTCTTCG 58 9822915 9822933 TCCGGTCCAGTATTTCACC 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 2 2 2 83 X 11040023 11040041 GTCGATATCAAGGATCGCA 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 3 2 3 81 X 11592562 11592580 CTAGTCGTTGATCCTTCGC 58 11592624 11594666 CACCCATTAACACCATTTGG 57 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 2 4 10 85 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 2 2 10 90 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848298 11856053 ACGTTGATTGAGTTCGAATCC 59 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 1 3 3 135 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466537 12466555 CTTCACCTTGACCTCCTCG 59 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748 2 1 3 85 X 12979685 12979705 AAAGTAGATGTGCCCAATTGG 59 12978595 12979638 TTAGGTAACCTCTGGAGCG 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 82 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 1 3 10 80 X 13489081 13489099 TCCAAGTATGAGCGACGTG 59 13488924 13489040 ATAGACCGTATTATAGCCACCC 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 3 4 4 81 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 2 2 2 133 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100683 14100701 TATTGATACGCAGCTCCCA 58 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 2 4 4 106 X 14642087 14642674 CATTCGAGCCAATGGTCAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 1 5 9 129 X 15714511 15714529 CAGGAAGCAAGTCAGTTCG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951 2 1 3 65 X 15998875 15998893 TTGTTGTTAAGTGCGCGTC 59 15997078 15998849 CCAGTCAGACTAAACAAACGTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 3 3 3 106 X 16256034 16256052 AATAATCGCGCTGGAAACC 59 16257425 16257443 TTAGCAAGTGCATTAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298 2 2 4 80 X 16380926 16381924 ATTATCATGATCACAAGGACCG 58 16380867 16380888 TCATGAAGCTGTGCATAAAGTC 59 NA Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 2 2 2 98 X 16483582 16483674 GATGAGATAGATCAGGCGC 57 16483502 16483522 GAACGTTGTCGTAATGAACTG 58 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 1 3 3 97 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388 3 1 2 156 X 17087054 17087935 GCAACACCAGATTAGTCGC 59 17088055 17088073 GTAACTGCTCATGGGACGA 59 NA Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 2 2 2 142 X 17314082 17314100 GGTGAACTTCCATCACGAC 58 17313898 17313978 AGCCATGTAGTTTGAAGAAGC 59 NA Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 1 1 1 60 X 17484483 17484501 GGAGGACACTGTGAAACAG 58 17484582 17484600 TGGATTCCTTCGATTGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302834 2 1 5 121 X 17615640 17640617 GTGAACTAGATACGTCCTATGAG 57 17640698 17640716 AAAGAAGTTGGTGAAACGC 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 3 7 9 73 X 18267443 18267464 TCGTACAATAAGATCTTCACCG 58 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074571 1 1 6 80 X 18286940 18298032 AGAACTTGGTCACAGAGTG 57 18286878 18286897 GTGTAGTCCATATCGAAGCC 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 1 3 6 161 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286879 18286898 TGTAGTCCATATCGAAGCCA 58 NA Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0113004 2 1 2 82 X 18800156 18801539 CACTATTATCAGTCGCCCAG 58 18801584 18801602 ATCGAGTAGTGCAGGACTC 58 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290275 3 1 2 112 X 19020877 19020895 ACCGATACGAGATGCTGTG 59 19020487 19020801 AAAGAGGTAGGTGTCGTCG 59 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0113316 2 1 3 93 X 19159262 19159280 TACATCTACAGCGAGGACG 58 19159336 19163303 TATTGTCGGTGGTAACCTCG 59 NA Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 3 2 2 60 X 19173018 19173038 CAGTCTACCTATTTGAGCTGG 58 19171982 19172000 CCAATGGCGATAATGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 2 4 4 80 X 19465725 19465818 CTAGGTTTCAGCACTTTATCTCTG 59 19465668 19465688 CATTGAACCAGACAGACTTCC 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733 1 1 2 184 X 19499544 19499565 AGGCTAACAAGAGGAATATCCC 59 19499710 19504426 GTTTGTCGTTGAGCTGGTG 59 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 1 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 CG12788 FBgn0031041 FBtr0100291 3 1 1 70 X 19512302 19512320 TGGATAATCTCAGCCAGCG 59 19512188 19512206 GAACTTGGTAACGCACCTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407 2 2 13 92 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20104508 20105411 GTAGCATGAGCTTTACGTGG 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089402 1 1 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101678 20103195 ATCAAATGCAAGCACTGTG 57 NA Nonspecific Drosophila melanogaster 61 sw FBgn0003654 FBtr0089402 2 1 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101678 20103195 ATCAAATGCAAGCACTGTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407,FBtr0089401,FBtr0089404 1 4 13 133 X 20101657 20103200 GAATTCACAGACGACGAAGAG 59 20101544 20101562 ATCTCGAGTGGTGTGATGG 59 NA Nonspecific Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 1 3 3 83 X 20804407 20804427 CCAATTTGAGAATGGTCAGGA 58 20804254 20804272 AAATAACCGTTGGCAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 2 2 2 60 X 21241700 21241718 AAGAGACATCGCGGTATCG 59 21241742 21241830 TTGTAATGGCACGGTTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 3 8 8 144 X 21253984 21254063 ACGATTGTAAAGGCTGCTG 58 21254168 21254189 GGTACGTATTAAAGACAATGGC 57 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 2 5 8 83 X 21247628 21247646 CTAATACGCGCCTATCTCG 57 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 2 5 5 96 X 21473853 21474022 AATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 3 2 5 148 X 21886355 21887250 TGGGCAATAAATATGTCGAGC 58 21887359 21887378 GATCAGGGTGTCTCTGATGG 59 NA Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 1 2 2 169 X 22246595 22246613 TTATGTGGCCAGACTTGGG 59 22230963 22230982 ACCATTCTCTGGACATTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snmRNA:765 FBgn0065083 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31892 FBgn0051892 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:L2:44EF FBgn0011906 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30254 FBgn0050254 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:49Fb FBgn0011882 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C788a FBgn0086063 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-276aS FBgn0067717 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:85Aa FBgn0012024 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300652 2 1 2 147 X 7792951 7795285 CAATATGAAGGCCGTTTGC 57 7792822 7792842 GATTCTTCTTGAGAACGACCA 58 NA Drosophila melanogaster 61 CR33963 FBgn0053963 FBtr0100004 1 1 1 60 X 12553621 12553641 TGTTTCTCGTGTATCTTGTGG 58 12553661 12553681 GGGAATGTAAGTTGACCACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903 3 1 2 216 X 22414890 22414908 TTAATTTCAAGGCGGTGCT 58 22414631 22414649 TAGTAGATGGGTCCCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0077353 3 1 5 81 X 21887459 21888900 ATTGCTTCAACAGAACAGCT 58 21888944 21888962 TAGAAAGCTCCGCAATGTC 58 NA InUTR Drosophila melanogaster 61 CG15450 FBgn0031132 FBtr0077280 1 1 1 80 X 20693245 20693263 CAACATACAATCAGGCGGA 57 20693304 20695331 GTTGAATTAACATGGCTAGCTG 58 NA InUTR Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 3 2 2 80 X 20385200 20385384 ATAAGCTTTACATCTCTGGTGG 58 20385425 20385443 AGACTTCCGTCTTTGTGTC 57 NA Drosophila melanogaster 61 Sdic2 FBgn0053497 FBtr0089610 2 1 1 60 X 20076814 20076832 CCTCTTCCTAACCTCGTCC 58 20076705 20076791 CTTTGTGTCCTTTAGCGACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Muc18B FBgn0031000 FBtr0074673 1 1 1 60 X 19110200 19110221 AATCAGAAACTACTGATGCTCC 58 19110239 19110260 GTAATGGGAGCATCAGTATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14193 FBgn0030994 FBtr0074670 2 1 1 60 X 19084412 19084431 AGAAGGAGAACGATCAGCAG 59 19084452 19084472 TCCTTGGATTCATCCTTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7406 FBgn0030980 FBtr0074664 3 1 1 160 X 18971827 18971907 ACCGACAACAATATGAAGGT 57 18972030 18972048 CTGATGACCTTGACGATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42302 FBgn0259198 FBtr0299682 2 1 1 68 X 18619512 18619530 TATGTATCGCTATGCCGGA 58 18619462 18619480 GATCCATACAGTTGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15056 FBgn0030918 FBtr0074560 1 1 1 80 X 18309564 18309655 TCGTTCAGCGTAATTAGCC 58 18309697 18309717 AAAGCTAATGCGAGACTTCAG 58 NA Drosophila melanogaster 61 CG6788 FBgn0030880 FBtr0074495 3 1 1 87 X 17783081 17783099 AGGACAACGATGCCTATCG 59 17783150 17783246 CCATTGAGCATGCTCTTGG 59 NA Nonspecific Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510,FBtr0300509,FBtr0300508,FBtr0299619 3 4 4 83 X 17764201 17764297 TACTACATCGTTAAGCTCAAGC 58 17764139 17764159 GTACAGGTTGTATGAGAGCAG 58 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 3 2 2 205 X 17521139 17521160 CAACAAGATCTTAATCCACAGC 57 17519674 17520973 AAGTGTTGTTTCTCCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 2 1 1 63 X 17102639 17102658 TTTAGTACGTGGTCATGCTG 58 17102684 17102763 TATGGGTGGTCCATAAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 1 1 1 61 X 17102641 17102660 TAGTACGTGGTCATGCTGTG 59 17102684 17102763 TATGGGTGGTCCATAAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34326 FBgn0085355 FBtr0112528 3 1 1 60 X 16926438 16926457 GTGAGTACCACGAATTGGGA 59 16926397 16926418 GTTGATGGTAGATGGTACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 crl FBgn0015374 FBtr0074283 1 1 1 159 X 16488064 16488147 GCGGAATACAAACAGTTAACAC 58 16488350 16488368 AGTCGGTCGGAAAGATGAG 59 NA Drosophila melanogaster 61 CG9903 FBgn0030756 FBtr0074297 3 1 1 97 X 16433850 16433868 CACTGTCCGTCGTACTCAG 59 16433699 16433789 GGCAGCTACAAGAATCTGC 59 NA Drosophila melanogaster 61 CG4301 FBgn0030747 FBtr0074272 2 1 1 87 X 16306192 16306277 GGGACTTTATATTCACCTTGGA 57 16306325 16306343 TAGACCATGCCCAAATTGG 57 NA Drosophila melanogaster 61 tay FBgn0260938 FBtr0074167 2 1 1 80 X 15778403 15778491 ATACGAGGATCTTGAGTTTGC 58 15778343 15778361 CAAGTTAGCTCGTCCAGTG 58 NA Drosophila melanogaster 61 CG33172 FBgn0053172 FBtr0074092 1 1 1 80 X 15665098 15665205 TAACACTGCATAGAGATCGCT 59 15665247 15665265 CTATATGCAGCTGGTGGGT 59 NA Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 1 2 2 80 X 15601087 15601170 ATTAATCAGGTGGCTGAGGA 58 15601026 15601044 CTTGTAGTCCAGAATGCCG 58 NA Drosophila melanogaster 61 CG15646 FBgn0030665 FBtr0074062 2 1 1 156 X 15563277 15563295 CTCGTATCTGGCCAAGGAG 59 15563139 15563157 CACTCCGATCGACTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sog FBgn0003463 FBtr0074063 1 1 1 81 X 15507295 15507315 CAAATGCGATGATCCCATCTC 59 15502050 15507253 CAAGGCTACATCCGTATCGT 59 NA Drosophila melanogaster 61 CG9203 FBgn0030646 FBtr0074074 3 1 1 86 X 15369314 15369332 CTTGTTCGCTCTGAACCTG 58 15369184 15369264 TAGTCCCTGTCATTGCTGG 59 NA Drosophila melanogaster 61 RpL37a FBgn0030616 FBtr0074027 3 1 1 121 X 15033099 15033117 CACAATAAGACGCACACCC 59 15032931 15033014 TTCACGGACCAGTTGTAGG 59 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983,FBtr0073993 3 2 2 96 X 15003794 15003890 AGGAGTACAATCCCAAGACG 59 15005123 15005141 TAGGAGAATACGCACAGCA 58 NA Drosophila melanogaster 61 CG9522 FBgn0030587 FBtr0073986 3 1 1 153 X 14742525 14742689 ATTCTTCAGCGATGTTCCC 57 14742390 14742410 CACCTGATGCACTATGTTCTC 58 NA Drosophila melanogaster 61 dpr8 FBgn0052600 FBtr0073913 3 1 1 91 X 14338553 14347012 CATTGTTGAACCCGTCACC 59 14347064 14347085 CGAATTTCACAATGCAAGTCAG 59 NA Drosophila melanogaster 61 CG32633 FBgn0052633 FBtr0073800 3 1 1 219 X 13455748 13456014 CAGACCACAGATGGATGCA 59 13456197 13456215 TAGTTGTAGCCGGAAAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tim9a FBgn0030480 FBtr0073775 3 1 1 92 X 13279621 13279704 ATTCCGAGGAGAAGTGCTC 59 13279758 13279778 CAATAACCTGGAACTCCTGGA 59 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301299,FBtr0301298 1 3 3 80 X 13165568 13165586 ATCAACTCGTTTCAGGAGC 57 13164667 13165526 CACCGCAAATTGATACTTGTG 58 NA Drosophila melanogaster 61 Mur11Da FBgn0052644 FBtr0300212 1 1 1 98 X 12862154 12862271 CAGTGGACAAGAGTTATTCGA 57 12862329 12862349 CGGTGATTGAAATAGTAGCCA 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 1 6 6 83 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545581 ATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 CG2574 FBgn0030386 FBtr0073644 2 1 1 96 X 12303387 12303405 ATATACCACTGCAACGTGG 57 12303465 12303552 AAAGTAGAACCTTGGCCAC 57 NA Drosophila melanogaster 61 CG32655 FBgn0052655 FBtr0073633 2 1 1 85 X 12129253 12129271 AAGTCTCGTTGTTCCAGCA 59 12129120 12129140 ACTCGTCTAACATGTCCTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Usp7 FBgn0030366 FBtr0073641 3 1 1 81 X 11919199 11919218 AAGCTGCAGTTCTTCATGTG 59 11919081 11919156 TGATGGTGCCCTTAAATGTG 58 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 2 4 4 98 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910898 TACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568,FBtr0073567 3 2 2 109 X 11763678 11763777 CGGTACATAAGTCGCTCTG 57 11763850 11763868 GTTCTGCAATGTCATTCCG 57 NA Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 1 2 2 80 X 11616429 11616572 GGAGCGATTTAAGATCGCC 58 11616616 11616634 TCCGTACGCTCTACAACTG 59 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073527,FBtr0073526 2 2 2 89 X 11581656 11583239 CAAAGAGTCTTCGTTCCGC 59 11583292 11583310 GGATCCTCGATGGTCATCG 59 NA Drosophila melanogaster 61 CG11699 FBgn0030311 FBtr0073510 1 1 1 111 X 11465132 11465210 AGCCAAGGATTTCCAGGAG 59 11465285 11465303 CATGAGGTCCGTGAGACTC 59 NA Drosophila melanogaster 61 Tim8 FBgn0027359 FBtr0073482 3 1 1 93 X 11262583 11262601 GAACCTTTCCGGCAATGAC 59 11262656 11262754 CTCGTTGAACTCGTGTATCTG 58 NA Drosophila melanogaster 61 CG15199 FBgn0030270 FBtr0073473 2 1 1 177 X 11035192 11035848 ACCAGAACTCATGACGAGAG 59 11035034 11035052 AAGCTAGGGACATCCAAGC 59 NA InUTR Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073430 3 1 3 159 X 10986740 10986820 ACTCGTATTTCGCTTCGTC 58 10986941 10986961 GAGTGCAAGTTAGGAAATCGA 58 NA InUTR Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 2 2 3 167 X 10986858 10986993 ATTTCCACCTGAGACAGCT 58 10987124 10987142 GCGAAAGGTGTATTCTCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32683 FBgn0052683 FBtr0071463 2 1 1 103 X 10307860 10314877 TCCGTAAAGTACGGGTCTG 58 10307775 10307793 CGGCGGTGTTACATTATCC 58 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089804 2 1 2 125 X 10135761 10136879 GAGGAGTTCAGTCGTTCGA 59 10135654 10135673 CACATTCGAGATACGCAACC 59 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089805 2 1 2 124 X 10135762 10136853 TCTTGATTTCGGTCGTTCG 58 10135656 10135674 CATTCGAGATACGCAACCC 58 NA Drosophila melanogaster 61 Ipod FBgn0030187 FBtr0071484 1 1 1 111 X 10126245 10126334 AAATGAAGGTCTTCATCTGCC 58 10126154 10126172 GTGGTCTTGCTACCTCCTC 59 NA InUTR Drosophila melanogaster 61 CG15368 FBgn0030104 FBtr0071308 3 1 1 60 X 9110314 9110332 TGCAATTTCGACTATCGCC 58 9110356 9110374 CAACGACGGGATTATCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071339 2 1 2 80 X 9090161 9090238 GCCATCCAAGATTCTACGC 58 9090099 9090117 AGATGGTACCCAATACGCG 59 NA InUTR Drosophila melanogaster 61 CG1885 FBgn0030066 FBtr0071268 3 1 1 64 X 8793959 8793980 GAGTTTCGGCTTCAAGAATCTC 59 8793916 8793937 CGGCATATTTATCCGGATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0020 FBgn0027330 FBtr0071280 3 1 1 80 X 8612196 8612216 GACTACTATGCAAGGAAGCAC 58 8612076 8612157 CACTTCCTCGATACCTTTACCA 59 NA Drosophila melanogaster 61 Cp7Fb FBgn0014465 FBtr0071201 2 1 1 89 X 8368221 8368381 AGTCAACAAAGCGGATTGC 59 8368434 8368452 GGTGAAGCTACGTACCTGG 59 NA Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081,FBtr0071248 3 2 2 81 X 8302348 8302429 GGACTTCATGAACCCAGGT 59 8302285 8302305 TCTTAGAAGTCATCTGCACGT 59 NA InUTR Drosophila melanogaster 61 Traf6 FBgn0026318 FBtr0071188 3 1 1 61 X 8050228 8050249 ATGCCAACAATCAAGTGTACTC 59 8050188 8050206 ACAGAACTTGTAGCCATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2263 FBgn0030007 FBtr0071190 3 1 1 60 X 8038161 8038181 GAGAACGTGAATGTAATCGCC 59 8038121 8038139 CGTACTTGATCATGGTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071136,FBtr0071135 3 2 2 146 X 7794936 7794954 TATGGGACAGGTTGTGGAG 58 7794295 7794313 CCCTTCTTCAGGAGCAGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 1 2 2 80 X 7581776 7581865 CGCCATATAGCTTTAGTTCCT 57 7581716 7581736 CATAGATCTCTTTAACGGGCA 57 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071069 2 2 3 181 X 7526815 7539817 CTCATTCAGAATTCCGCGC 59 7539962 7539980 CTCGATGTCGTTTGTTGCT 58 NA InUTR Drosophila melanogaster 61 CG34337 FBgn0085366 FBtr0112539 2 1 1 129 X 7311350 7311368 TTTATGGGTCAGAGCTGCT 58 7311460 7311549 GTCTAAAGCCGGTAGTAGCT 59 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 2 2 2 198 X 6964963 6965450 AAAGAGGTGGACTACGTACC 58 6965609 6965629 CATAGACAATGATCACCACCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG14431 FBgn0029922 FBtr0071002 1 1 1 60 X 6854379 6856213 CATTTACAAAGGGAACTGCTG 57 6856235 6856253 AGCCCTTTGAATCCTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG3342 FBgn0029874 FBtr0070918 2 1 1 85 X 6421702 6421794 AAGTTGCGAAGTGAATCGG 58 6421635 6421653 AAGCTGGATGATTCGTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 rux FBgn0003302 FBtr0070889 1 1 1 104 X 5931001 5931110 AAGAACATAAGGAGACGCCT 58 5930916 5930934 AGAAGCTGAGGATGCAGTC 59 NA Drosophila melanogaster 61 CG3726 FBgn0029824 FBtr0070858 3 1 1 145 X 5835115 5835202 TAAGCATCCTTACAGTGGCA 59 5835364 5835382 TCTGCAAGTAGGGATTGGT 58 NA Drosophila melanogaster 61 Rab-RP4 FBgn0015794 FBtr0070849 2 1 1 80 X 5565163 5565181 TCTTCATCGAGACCTCAGC 58 5565037 5565119 CGGAGGAGACGATCTTCTC 59 NA Drosophila melanogaster 61 CG32762 FBgn0052762 FBtr0070791 3 1 1 169 X 5395179 5395197 AATGCACAGCCAACAACTG 59 5394957 5394976 AAACTCTGGGACTTGTCTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15785 FBgn0040913 FBtr0070747 3 1 1 140 X 5199969 5199987 GTGCGAGATCAATTGCCTG 59 5200169 5200190 TCATAGTTGAGACACTTGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15786 FBgn0029749 FBtr0070746 1 1 1 88 X 5196019 5196037 ATGGACCTACTATACGGCC 58 5196089 5196168 AATTGCGGAATGTCTCTGC 58 NA Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 2 2 2 176 X 4528057 4528078 ATCTAGGAATCGATTTGCTGTG 58 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG12685 FBgn0040910 FBtr0070673 2 1 1 103 X 4409689 4409707 ATATGGGATGTGCGATGCA 59 4409773 4410064 GACACAGCACATGACAATCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15579 FBgn0040906 FBtr0070657 2 1 1 77 X 4205674 4205692 CGTATTCCATCGTCCACTC 57 4205615 4205633 ACCTCGTCAACAGTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 2 2 2 98 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024844 3024863 GAAATCCATTGACCACAGCC 59 NA Drosophila melanogaster 61 CG14419 FBgn0029639 FBtr0070564 2 1 1 60 X 2779747 2779766 TCGTCTACAACCACTACGAC 59 2779706 2779724 TTGTGGACTCTGACTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070503,FBtr0070502 1 2 2 175 X 2589951 2590028 TCTAGTTGGCGGAACTGAG 59 2589794 2589812 TATATTGGGCGAAGCCGAG 59 NA Drosophila melanogaster 61 CG2652 FBgn0025838 FBtr0070505 3 1 1 64 X 2576418 2576436 GTATTTGCGAGGAGATGCT 57 2576372 2576390 ATTCTGTCTCATCATGGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302448 3 1 4 113 X 2476755 2476774 AATAGTGAAAGTGCAGTGGG 58 2476848 2477050 CCGAATTGTATGTGGGTACTC 58 NA InUTR Drosophila melanogaster 61 CG8310 FBgn0040377 FBtr0070450 3 1 1 82 X 2473970 2474043 GGCAAGATCATTGAGACCA 57 2473906 2473924 GTCGTAAACTTGACCTCGG 58 NA Nonspecific Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 1 3 3 80 X 2003620 2003768 CAACATATTGCCATACGACCA 58 2003810 2003828 GCATTGATGTACTCGGCTC 58 NA Drosophila melanogaster 61 Mur2B FBgn0025390 FBtr0070284 1 1 1 80 X 1451794 1451957 GTTCGATTACAATAATCGCTGC 58 1451735 1451755 CAGACATAGTAGTACTGCTGC 58 NA Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070237 3 1 2 61 X 1240149 1240223 GCGATCAGTATTGCATCACTG 59 1240108 1240129 CATTTCACCGAACATGTAAAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 fs(1)N FBgn0004650 FBtr0070207 3 1 1 81 X 1218827 1218904 GTTACATGTAGAGGGACCGG 59 1218945 1218966 ATAGTCTCCTGGAAAGCTTAGG 59 NA Drosophila melanogaster 61 CG34320 FBgn0085349 FBtr0112522 1 1 1 94 X 1057966 1057984 TTGGACAGCTACGATGGTG 59 1057786 1057908 CAAGAAGGCATTTGCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG11663 FBgn0029539 FBtr0070164 2 1 1 161 X 788543 788649 AATCCTACACTATGGCAAATCC 58 788770 788789 TTATCTGGGTTTGCATCTGC 58 NA InUTR Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0070138 3 1 2 283 X 664208 664226 AACAGAAACCCTGGAGTGG 59 664473 675519 AGTTTGGCAATCTGGAGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 ac FBgn0000022 FBtr0070072 3 1 1 60 X 264198 264218 CTCTGTTATCCGGAGAAATGC 58 264240 264258 GAAGCCATTGTTGACCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40572 FBgn0085747 FBtr0114197 2 1 1 176 U 8735313 8735332 GTGGTCATATGATTCTGGCA 57 8735471 8735489 CTGTCGTAGAACAGCTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40546 FBgn0085742 FBtr0114192 3 1 1 95 U 5728174 5728194 TCGTCATCAATTTAGTGACGC 59 5728251 5728269 ACGAGGTGATTGGCTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40801 FBgn0085520 FBtr0113933 2 1 1 72 U 2929776 2929870 TTTCAATTCATCGTTGAGGGC 59 2929724 2929742 GATCGTACACCTGCTTGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG41087 FBgn0069947 FBtr0301119 2 1 1 91 U 2089794 2089812 CCACGTTCACCATAATGGC 59 2089667 2089740 CAATCGTCGTCCGATTTCTG 59 NA Drosophila melanogaster 61 CG11152 FBgn0039937 FBtr0089251 1 1 1 94 4 859684 864925 GATAAATCGTCGAATTGGATGG 57 859611 859629 AGCACATATGTCAGAGTGC 57 NA InUTR Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 3 4 4 80 4 714052 714070 ACCAACGATGAGGAGTACG 59 713453 714011 AACATGAGGTTGAATTTCCTCG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377a FBgn0086665 FBtr0091751 1 1 1 60 3R 26033523 26033541 AATGGCAGCTTATCACTCC 57 26033481 26033501 GGAAAGTAATGCAGTAACCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:K5:84ABb FBgn0026164 FBtr0081623 1 1 1 60 3R 2647518 2647536 TAGCTCAGTCGGTAGAGCA 59 2647560 2647578 GAACAGGGACTTGAACCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4atac:83A FBgn0052861 FBtr0078791 1 1 1 87 3R 1216917 1216935 CCCAACTTTACCGTAACCA 57 1216985 1217004 CCACGATTCAATCTTGAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek6 FBgn0039862 FBtr0085821 3 1 1 280 3R 27484689 27484888 CAGTCTGCTGGATTCTGCT 59 27485132 27485150 TATGTACTGCACCTCGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31204 FBgn0051204 FBtr0085814 2 1 1 60 3R 27218462 27218480 AGTTCTTTACGAGCTTGCC 58 27218420 27218438 AAGCAATCGTTCATCAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15544 FBgn0039804 FBtr0085708 1 1 1 80 3R 26665683 26665703 AACAACGTCAGCATTCATCAC 59 26665741 26666178 ACTTGACTAGATCTCTATTGGGC 59 NA Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085702 1 1 2 110 3R 26609359 26609669 CTTCGTTCGAGAAGACCTG 58 26609743 26609761 ACTTAAACTTCCGCAGCAG 58 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681 2 2 3 150 3R 26345475 26348958 CAGTTAAAGGAGGCCAAGGA 59 26344271 26344289 TCTTGGGTGTTACCCAGTG 59 NA Drosophila melanogaster 61 CG2218 FBgn0039767 FBtr0085627 3 1 1 192 3R 26252529 26252868 GGGAGCTAATGATCTTCCC 57 26252355 26252373 ATGAGGAACTTCTCGATGC 57 NA Nonspecific Drosophila melanogaster 61 CG15536 FBgn0039766 FBtr0085628 3 1 1 60 3R 26250352 26250370 CTCTCAAGAAGCGATCTCC 57 26250310 26250328 CCAGATAGCGTAGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ocn FBgn0041102 FBtr0085599 1 1 1 80 3R 25863209 25863227 GATGATTCACATGCACGGT 58 25863093 25863165 AAGATTTCCTCGTGGTCCT 58 NA Drosophila melanogaster 61 dgt1 FBgn0039710 FBtr0085527 1 1 1 80 3R 25682290 25682376 GATGATCCTTTGAAACACGCT 59 25682230 25682249 CTGAAGCTTGATCAGCTTCG 59 NA Drosophila melanogaster 61 ca FBgn0000247 FBtr0085484 2 1 1 80 3R 25635474 25635492 CAGTACTGCCATCAATGCC 59 25635533 25635625 TTATTAAAGCGATCTTCGTCGG 59 NA Drosophila melanogaster 61 CG7567 FBgn0039670 FBtr0085472 2 1 1 117 3R 25413411 25413429 CATTGTGGACTTCGTGCTC 59 25413214 25413233 ATGGATCTTGATCTGGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367,FBtr0085369,FBtr0085366 3 4 4 82 3R 24939159 24939721 CGGTGCTTACAAGGTTTCC 59 24939767 24939785 AGCCCATCTCTGTGATTGG 59 NA Drosophila melanogaster 61 CG11842 FBgn0039629 FBtr0085362 3 1 1 88 3R 24878511 24878580 ATATAGCCAGGACGTGCAC 59 24878631 24878650 GATAATCGGAGCGTTCTCGA 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 2 4 4 87 3R 24698368 24698446 TCTACAAGGCTCTAACTGCC 59 24698300 24698318 AGGAAGGTCAGAATCGAGC 59 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 2 2 2 82 3R 24692180 24692198 GACCTGCACAGTCAATCTC 58 24692241 24692323 GCAGCTTGTAAATGTATCTCAG 57 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352,FBtr0085354 2 3 3 82 3R 24652718 24652736 AGCACGAGATCTACGATGG 59 24652582 24652672 TCCCACATGACCATCACTG 59 NA Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 1 2 2 60 3R 24409375 24409393 GAGAACGGGTGCTATTTGC 59 24409333 24409352 TAATGGCCTCCTTCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-VI FBgn0039584 FBtr0085289 3 1 1 84 3R 24287906 24289441 GAGTTATTGCTCAGTGCTCAC 59 24289487 24289505 ACAATGTCGCTGCATTTCC 59 NA Drosophila melanogaster 61 Gp93 FBgn0039562 FBtr0085254 3 1 1 84 3R 23776244 23776263 GCAAGGTTCTCGATATGCTG 59 23776308 23776661 CCCAATTTGATGTTGGTGGAG 59 NA Drosophila melanogaster 61 CG42534 FBgn0260487 FBtr0300898 2 1 1 85 3R 23187090 23187172 GTCTTCAGATAAAGATGGCCTC 58 23187218 23187236 ACAGGCCTATCAAGGTGTC 59 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 1 3 3 80 3R 23081101 23081182 GCATTATGCCTGTTAACATCAC 58 23081223 23081241 GCACTTGTATGGTGAGCAC 59 NA Drosophila melanogaster 61 CG5500 FBgn0039461 FBtr0085064 1 1 1 137 3R 22705551 22705818 ACATAGAGATACCTCCCGAG 57 22705918 22705936 TCTTGCTCAGCACAATCTC 57 NA Drosophila melanogaster 61 CG14543 FBgn0039404 FBtr0084968 3 1 1 89 3R 21882427 21882450 GTAGAGAAGATCTTCAATCACTGG 58 21882498 21882580 TTCTATGGCCACCTGTTGG 59 NA Drosophila melanogaster 61 boss FBgn0000206 FBtr0084949 3 1 1 97 3R 21792193 21792272 TCGGAACAGAGTGTTTACG 57 21792333 21792351 GGTAACGTGGGAATCTCAC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084894 3 1 2 174 3R 21434507 21434594 GTTAAGAAAGAATCTGGTACCG 57 21418512 21418531 GGTAAAGAACACATCGTCCT 57 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 3 2 2 80 3R 21098641 21098716 AGATCCTTCTATGCTGCCT 57 21098760 21098778 ATCCATTGATGCCTCTTCC 57 NA Nonspecific Drosophila melanogaster 61 bam FBgn0000158 FBtr0084869 3 1 1 91 3R 21069704 21069784 CGGACAAGTTCCATACTCAG 58 21069632 21069652 GTTAAATACGTGCACACTGAG 57 NA Drosophila melanogaster 61 CG31103 FBgn0051103 FBtr0113389 1 1 1 80 3R 21045369 21045459 TGTTACAGGTATCTTCCTATCGAC 59 21045495 21045516 CCATAGAGTAAGACCCTTCGAC 59 NA Drosophila melanogaster 61 CG7016 FBgn0039238 FBtr0084707 1 1 1 60 3R 20689445 20689466 CAGATAATGAGTCTAGCACCAC 58 20689487 20689505 GTCGTTGGAAAGATGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 1 4 4 88 3R 20172700 20172812 AGAACTACAACTCGACGGG 59 20172630 20172648 AGTCGAGCCATACTGTTGG 59 NA Drosophila melanogaster 61 CG5715 FBgn0039180 FBtr0084634 3 1 1 120 3R 20119723 20119741 TTTACCAGCCAGGAATTGG 57 20119565 20119583 ACTTTCCGCTACCAATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10301 FBgn0039106 FBtr0114504 2 1 1 81 3R 19536108 19536132 CTATTTCCGGAGATCATGAATAACC 59 19536170 19536255 CCGGATAGAGACAAACTCCC 59 NA Drosophila melanogaster 61 CG31148 FBgn0051148 FBtr0084441 2 1 1 96 3R 19526428 19526498 GTATCAGCAATTGGTGGCC 59 19526558 19526576 AATCACAATAGTCCGCCGT 59 NA Drosophila melanogaster 61 CG16723 FBgn0039092 FBtr0084484 3 1 1 81 3R 19420548 19420569 GTTTAAATGGATGGTTCTGGAC 57 19420348 19420508 GTATGATCCAGACACTGACAC 58 NA Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 3 2 2 127 3R 19079152 19079170 CAGACAGTTATGGACGTCG 58 19079261 19079337 GAATAGATCTTGGTGCGCA 58 NA Drosophila melanogaster 61 CG6733 FBgn0039052 FBtr0084352 2 1 1 80 3R 18923559 18923637 GATGTTGACTATACTGCCTGTG 59 18923675 18923696 AGGATAAACCACTTCAACAGGA 59 NA Drosophila melanogaster 61 CG6688 FBgn0039038 FBtr0084343 2 1 1 93 3R 18838522 18839645 GCGTTCTGGAGGTAAATGG 58 18839702 18839720 AGAATTGTGACGCAGTCCT 59 NA Drosophila melanogaster 61 CG31156 FBgn0051156 FBtr0084277 3 1 1 80 3R 18436492 18436511 GGAGGACAACTACAGAATCC 57 18435191 18436451 TTCTCCGACAATACTTTCCAC 58 NA Drosophila melanogaster 61 CG5377 FBgn0038974 FBtr0084293 2 1 1 60 3R 18293597 18293618 TGGCTCAGATTTGAACATTGTG 59 18293558 18293576 CGGCATCAGGAGTAGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 1 2 2 80 3R 17604913 17605281 TCTATAGGAATCTGAGTGGCC 58 17604853 17604872 ACTCCATGTGAAAGTCTCCA 58 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 3 3 3 84 3R 17449362 17449568 GGGATTATTTCAAACGCCCT 58 17449297 17449315 ATATTCAGGCTGGGACTGC 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 1 4 4 85 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 CG5793 FBgn0038858 FBtr0084013 1 1 1 80 3R 16953768 16953854 CAATTACATGGACGTTGTGCT 59 16953895 16953914 TACGAAGATGTGGGCTTGAG 59 NA Drosophila melanogaster 61 TotA FBgn0028396 FBtr0083971 3 1 1 83 3R 16696812 16696917 CTGCTCTTATGTGCTTTGCA 59 16696963 16696981 TAAGGTTGTCAGCCTCACG 59 NA Drosophila melanogaster 61 Fancd2 FBgn0038827 FBtr0083995 3 1 1 80 3R 16637641 16637661 GTAACTTGTTAAAGCTGGGCA 59 16637526 16637600 ACAGTATCCGTAAGTCCTCG 58 NA Drosophila melanogaster 61 Lrrk FBgn0038816 FBtr0112788 2 1 1 80 3R 16466451 16466527 TATGGCTTCACAAGATTACGC 58 16466569 16466587 CCTGTCTGCCAAAGATTCC 58 NA Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0113252,FBtr0083899 1 2 2 60 3R 16152600 16152619 ATCAATCACATCAAGACGCA 58 16152485 16152503 AGTTCAACAGGGAAGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 trem FBgn0038767 FBtr0083840 3 1 1 84 3R 15855707 15855787 CATCATAGAATTCACACTAAGGAGC 59 15855647 15855665 GGAACTTCAGGTTGTCCGA 59 NA Drosophila melanogaster 61 CG4854 FBgn0038766 FBtr0083830 1 1 1 83 3R 15854486 15854504 CAATGTCTACTCAGAGCGC 58 15854551 15854634 TGACAGATTTCGCATTCGT 57 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 2 3 3 81 3R 15676018 15676036 TGTTTCGCAACCTAAGGGA 59 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 CG5250 FBgn0038691 FBtr0083743 1 1 1 60 3R 15054561 15054579 GAACGGTGAAACGATACGG 59 15054519 15054537 TCGTCTATGTTACAGCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083727 1 1 2 130 3R 14920732 14921128 CGTACTCAAAGTTATCTGTGCA 58 14921219 14921237 TCCGACTTGGTCTTGAAGG 59 NA InUTR Drosophila melanogaster 61 gatA FBgn0260779 FBtr0083718 3 1 1 89 3R 14853898 14853917 CCTTAACAAGGATCACTGGC 58 14852918 14853849 CCAATTGCTGCATAACAAAGAC 59 NA Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083665 2 1 2 199 3R 14495410 14496834 ACTAACGACTATCCACGGC 59 14496996 14497015 CAGGCGTACTGAATTTCGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0083638 1 1 5 80 3R 14410301 14412011 AGAATCGTAGGTGGCACAC 59 14412053 14412073 TCCTTCGGATCTCTTTCTTGG 59 NA InUTR Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 1 5 6 80 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229686 ACATCGCGTATCTTGACAC 58 NA Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 3 2 2 80 3R 13216264 13216282 CTATGAGCTTGGTCGTACC 57 13202973 13216221 ATGTATAAACACGGGTCCAG 57 NA Drosophila melanogaster 61 CG31419 FBgn0051419 FBtr0083433 3 1 1 61 3R 13110929 13110949 CGAAAGAATTACATCCTGCCG 59 13110972 13110990 TCATATGGGCGACACTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31419 FBgn0051419 FBtr0083433 1 1 1 60 3R 13110930 13110950 GAAAGAATTACATCCTGCCGG 59 13110972 13110990 TCATATGGGCGACACTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Patr-1 FBgn0028470 FBtr0083392 2 1 1 80 3R 12869403 12869591 ATCTACCGGACGAAGATGG 58 12869635 12869653 CGGATCCAAAGGTTTCGTC 58 NA Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 3 2 2 60 3R 12398523 12398543 AGAACTTTACAACGCTACACC 58 12398563 12398583 TCCAGAAACTCCAAGGTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110963 3 1 2 70 3R 12298720 12298738 AGTGAAACTTAACCACGGG 57 12299097 12299117 ACACTCTCATACAGCATTCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CSN5 FBgn0027053 FBtr0083292 3 1 1 106 3R 12296146 12296220 AGAGGACAACACAATGATTGTC 59 12296287 12296305 TGTAGGCGGTCATGTACTC 58 NA Drosophila melanogaster 61 CG10405 FBgn0038431 FBtr0110773 3 1 1 95 3R 12280893 12281215 TCACCGAAGCAATGTTCTG 58 12281347 12281365 TTCCGATAAGGGTTCCCTG 58 NA Drosophila melanogaster 61 CG17929 FBgn0038415 FBtr0273219 1 1 1 82 3R 12151458 12151536 CCTGTGCAGTGTTCTTTCTG 59 12151581 12151599 CGTGGTGTTTAAGGTCTGG 58 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480,FBtr0301479 1 2 2 80 3R 11878489 11878508 AGGTAACGCTAAAGGAGCTG 59 11878548 11878624 GGGACTTTAGATATCTGGAGGG 59 NA Drosophila melanogaster 61 CG10407 FBgn0038395 FBtr0083237 3 1 1 80 3R 11871567 11871591 GAGTAGTACTACATATAGACTGGAC 57 11871379 11871532 ATACCTTAAGAAAGGATGGCAG 58 NA Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 2 2 2 80 3R 11798317 11798426 TGCAAGAAGTATTTGGCCC 58 11798255 11798275 ATACTGCAGGAAGTGAATGAG 57 NA Drosophila melanogaster 61 spn-E FBgn0003483 FBtr0083183 2 1 1 80 3R 11667698 11667719 GTTCAAAGTGAGGTGTACAAGG 59 11667758 11667834 TGCACTCGGATTCATTATGTG 58 NA Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093 1 1 2 86 3R 11188187 11188205 TAAATTCGCTAGGCAGTGG 57 11188254 11188323 TTAGACTGATGTAACCGCTG 57 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 3 2 2 82 3R 11151701 11151721 GCCCAAAGTATTGTAAATGCC 58 11151562 11151658 TTTACACGGTGAATCTCCAG 57 NA Drosophila melanogaster 61 CG6276 FBgn0038316 FBtr0083123 1 1 1 164 3R 11145684 11145702 GAACGCTGGATAAGTCAGC 58 11145477 11145557 AGTTTAAAGACCTCCTCCGT 58 NA InUTR Drosophila melanogaster 61 CG31344 FBgn0051344 FBtr0083136 1 1 1 95 3R 11050101 11050473 TATTCAGGCGTGGTCAGAG 59 11050024 11050042 TGGATGGAATAGCCAGCAC 59 NA Drosophila melanogaster 61 CG6654 FBgn0038301 FBtr0083139 1 1 1 80 3R 11038034 11038052 ACTTAGCAAGCACATGGTG 58 11037917 11037993 AGCATGGTGAATACTTTCTGAC 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 3 6 6 81 3R 11027854 11027872 TTCACAATGACGTTCCTGG 58 11027917 11027997 CGTAAACGTCCTTGCTAGC 59 NA Drosophila melanogaster 61 CG33332 FBgn0067629 FBtr0082999 1 1 1 104 3R 10714399 10714417 AGAGGAGTCCCTAGTGGAG 59 10714545 10714563 AAAGGTCTTCGTTCTGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7886 FBgn0038248 FBtr0082976 3 1 1 81 3R 10455251 10455349 ATCCACAAACCAACATTGATCC 59 10455191 10455211 AAGCGAGTATAGATCACTGGC 59 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 2 3 3 112 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452026 TCAAGGAATACCTTTAGCACAC 58 NA Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082931 1 1 2 95 3R 10152842 10152985 CCAATTTGTTCACGGTCGG 59 10153043 10153062 CATCTGCCGAACTTGATCAG 59 NA InUTR Drosophila melanogaster 61 CG9631 FBgn0027563 FBtr0082898 1 1 1 182 3R 10051835 10051997 AAATGAGGAGTATGATGCCC 57 10051672 10051690 TCCGAATCTATTCTGGGCA 58 NA Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 3 2 2 80 3R 9536989 9537007 CAAGTTGCTGATTCTCGGG 58 9536736 9536949 GCTTCACCAATGTCATAATAGGG 59 NA Nonspecific Drosophila melanogaster 61 Adgf-C FBgn0038173 FBtr0082821 2 1 1 80 3R 9534093 9534163 CAAGAAGTTGCACCAAGCA 59 9534206 9534225 TAGAGTGGCTTTCCCTTGTC 59 NA Drosophila melanogaster 61 yellow-e FBgn0041711 FBtr0082757 3 1 1 60 3R 9236528 9236546 GTGTGGTTTACTTCCAGCC 58 9236109 9236127 AGGACATTCTTATGCACGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14375 FBgn0038147 FBtr0082762 3 1 1 83 3R 9215469 9215778 AAATCATGGTTTAACCGACCTC 59 9215407 9215426 ATTCAATTCGGCGGAATTGG 59 NA Drosophila melanogaster 61 CG8449 FBgn0038129 FBtr0082778 1 1 1 80 3R 9095548 9095819 TGGATGGATACTTGGAGAATAGTC 59 9095491 9095511 TTCGCGCTATCTTGATTACAG 58 NA Drosophila melanogaster 61 CG14383 FBgn0038102 FBtr0082724 2 1 1 60 3R 8814014 8814037 CTACTGCTCCTTCATAAACAACTC 59 8813977 8813996 GCCACGTAAATGGATAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100525,FBtr0100524 3 2 2 65 3R 8220803 8220821 TAGGCATCTTTCGACCAGC 59 8220660 8220678 CATCAACCCATCCTTGCAC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 GstD8 FBgn0010044 FBtr0082575 1 1 1 60 3R 8205992 8206010 GATGACTCGCTGTATCCCA 59 8206033 8206052 AGTAGAGCCTCTGATTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 3 2 2 180 3R 8175695 8175925 CTAGCCAACCAAATCCCAG 58 8175533 8175552 CGGCTTTAACGTATCCACTG 59 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082562 2 2 3 60 3R 8126313 8126331 CAAGCTGCTTCTCAGACTG 58 8126352 8126621 CAATTGCTCAATGACTTGTGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Ugt86Dh FBgn0040252 FBtr0082340 2 1 1 84 3R 7001530 7001548 GCCCAAATTGGATATGCTG 57 7001946 7001964 CAAGAATTGAGCCTCCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4089 FBgn0037838 FBtr0082281 1 1 1 89 3R 6642584 6642603 GTACAAGATGCTGCAACAGG 59 6642655 6642731 CTCATTGGATCGCGAATGG 59 NA Drosophila melanogaster 61 CG3999 FBgn0037801 FBtr0082225 2 1 1 84 3R 6077682 6077903 ACCTCTGAATGAGCACGAG 59 6077951 6077969 ACCCATTCCGATGTAGGAG 58 NA Drosophila melanogaster 61 knk FBgn0001321 FBtr0082194 3 1 1 80 3R 5949761 5949851 AGCGAGGATACCTTGATCC 58 5949699 5949721 CAAAGATAGTCTTATCTCCTGGC 58 NA Drosophila melanogaster 61 CG8534 FBgn0037761 FBtr0082143 3 1 1 90 3R 5638671 5638689 AGAAAGCCCTACGATCTCC 58 5638743 5638964 AGTGAAGACCCGCTATCAG 58 NA Drosophila melanogaster 61 CG9461 FBgn0037760 FBtr0082155 2 1 1 84 3R 5632296 5632314 CAGTCCGATTATGCGAGAG 57 5632129 5632248 CTCAAAGTAGCCCATTCCA 57 NA Drosophila melanogaster 61 CG12950 FBgn0037736 FBtr0082170 1 1 1 80 3R 5563915 5564013 CAAGTAATTGGAGGCTATCCC 58 5563855 5563875 CAAATGAGACAATTCGCATGG 58 NA Drosophila melanogaster 61 alphaTub85E FBgn0003886 FBtr0082087 3 1 1 128 3R 5558517 5558880 TTTGATCATCATGAGGGAATGC 59 5558410 5558428 TTATCGGAGGGCATATGGC 59 NA InUTR Drosophila melanogaster 61 CG16899 FBgn0037735 FBtr0113209 2 1 1 93 3R 5554320 5554394 AAATCGACAGGAAGGACGT 59 5554245 5554263 TTTGTTTGTCGGATGGGTC 58 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 1 3 4 217 3R 5521238 5521319 CAAATCGGAGGCTTCTGTG 58 5521039 5521061 GGTAGTTTGTGATTAGCAGTAGG 59 NA DesignRelaxed Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082095,FBtr0082094,FBtr0082097 2 4 4 60 3R 5513481 5514267 CTTCAGCTCCGACTTCTCC 59 5513439 5513457 GCTCAAATCTGTGCTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9492 FBgn0037726 FBtr0082100 3 1 1 80 3R 5493922 5494762 GATCAAGTCCTGCAACCAC 58 5493860 5493880 ATTACCGCATAGACGTAGTCC 59 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922,FBtr0081921 3 2 2 80 3R 4652241 4652265 AATAGCTATGATGAGCTCTACTACG 59 4652303 4652375 ATAGCGAAGAACCATGGCA 59 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 1 3 3 98 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564347 4564366 GTATCCAACTTGAGAACGGG 58 NA Drosophila melanogaster 61 Or85b FBgn0037590 FBtr0081900 1 1 1 80 3R 4336171 4336190 CCTCTTCCTTGTCTCTTCGA 58 4336058 4336128 AATCCGTAGCTAGCATCGG 59 NA Drosophila melanogaster 61 CG7900 FBgn0037548 FBtr0113204 2 1 1 82 3R 3919984 3920002 ACCAATTAGGAGTCGCCTG 59 3920048 3925761 ACTCCACCGATGTTAGCTG 59 NA Drosophila melanogaster 61 CG10092 FBgn0037526 FBtr0081752 3 1 1 123 3R 3714210 3714291 AAACATAAGTGCCACTACCAG 58 3714376 3714394 GAACTCGTGATCTCGTTGC 59 NA Drosophila melanogaster 61 CG18747 FBgn0042104 FBtr0273255 3 1 1 111 3R 3608532 3609022 CAAGGAGGTTCAAGCTGTG 58 3608439 3608458 TGATAGATAATCCTCCCGGC 58 NA Drosophila melanogaster 61 alpha-Est10 FBgn0015569 FBtr0289953 1 1 1 80 3R 3313941 3314036 GTATGTCAAAGATCTGCAGCC 59 3313881 3313899 GCTTCGCCAACTTGATAGC 59 NA Drosophila melanogaster 61 CG42650 FBgn0261502 FBtr0302394 2 1 1 105 3R 3217600 3217620 GTCAGGTATAACAACCAGCTG 58 3217681 3217757 GAGTAGTGTAAGACATCACTTTCAC 59 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 2 2 2 80 3R 2579786 2579807 CCTTCCGAGGTTAAATACAGTG 58 2579663 2579682 ATTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 3 1 1 128 3R 1936187 1936697 TTCCTGATCTGCAGTCAGG 59 1936077 1936096 AGATGAATACCGTTCCAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Gasp FBgn0026077 FBtr0112922 3 1 2 80 3R 1919996 1920014 AGTGTTCAAGATTGGCGAC 58 1915401 1919952 CCATAGTAATCCTCGCACC 57 NA Drosophila melanogaster 61 CG11373 FBgn0040679 FBtr0078657 2 1 1 94 3R 1786578 1786596 ATCCTCATCCAATCCCACC 58 1786218 1786522 TCTTCCAAATCCTATCGTGTG 57 NA Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 1 1 1 97 3R 1560061 1560079 CTTCAGACGCATGTACCTG 58 1560140 1560227 GTTCCGATAGCTTCTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 katanin-60 FBgn0040208 FBtr0078827 2 1 1 80 3R 1056340 1056725 AGTGGAGCATGATCAACCA 59 1056278 1056296 GCGAGATGTCTTGTAGGGT 59 NA Drosophila melanogaster 61 laf FBgn0020280 FBtr0078852 1 1 1 80 3R 704136 704207 TTAGAAATGTCCCGTCATGGT 59 704076 704094 TCCCGATTCAGAATCGTCC 59 NA InUTR Drosophila melanogaster 61 CG34112 FBgn0086608 FBtr0110805 2 1 1 126 3R 219649 219667 CAACTTCTCCATCTCCCGA 58 219482 219561 ATATGGGCTCTTCTCGAAGTC 59 NA Drosophila melanogaster 61 CG9791 FBgn0037232 FBtr0273009 3 1 1 80 3R 138753 138771 AATGATCCCGCCAATAGCT 59 138815 138895 GATTCGACGAATGCTCAGG 58 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 2 3 3 147 3R 95684 95702 GACAGTAACGGCATGACTC 58 95496 95573 TAGCGTTCATAACCACTGC 58 NA Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 1 2 2 80 3R 47701 47790 GTGTAAAGGCGGATCTCTG 58 47834 47852 TAGAAGATGCGCAGAACAC 58 NA Drosophila melanogaster 61 CR18217 FBgn0036646 FBtr0301925 1 1 1 93 3L 16595715 16595733 AATGGACAGAAGCAGTGGA 59 16595581 16595661 CCGAAGACTCTTTAGATTGTCC 58 NA Drosophila melanogaster 61 CR33701 FBgn0053701 FBtr0091689 2 1 1 60 3L 9506838 9506860 CTAGTTTCGAACTCAACTTGTCC 59 9506800 9506821 AAGAGATAAAGTCGGTATCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip63F-2 FBgn0004911 FBtr0073162 2 1 1 60 3L 3935239 3935260 GCAACTTAAGTTAGTTATCGGC 57 3935281 3935299 TTAAGACCCGGTTAAGTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070044 3 1 3 208 3L 23092786 23092804 TCCGTAACCACGTACACTG 59 23095374 23095392 TTGACATCTGTGTACACGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14450 FBgn0037184 FBtr0078537 2 1 1 97 3L 22720565 22720640 GATAGCCAACTACGACATAACC 58 22720489 22720507 CATACAGGATGTCGCTGAG 57 NA Drosophila melanogaster 61 CG14561 FBgn0037149 FBtr0078480 3 1 1 61 3L 22059654 22059672 ATAAAGCTTCCAGCTCGGG 59 22059697 22059715 GATGAGATTTGCACGTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14568 FBgn0037124 FBtr0078455 2 1 1 70 3L 21726527 21726545 ACAAGTTCATCTGCTCCCT 58 21726475 21726493 GAATCTGGTAGGCTCTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 2 1 1 113 3L 21628644 21628718 AACCTGCTTCACAATGCAG 59 21628795 21628813 ATCGATCTGTTCCCAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 SAK FBgn0026371 FBtr0078387 1 1 1 80 3L 21506447 21506548 AATAGCTACTGAGCTCTCCC 58 21506386 21506404 TGCATGCTCGGAATAACAG 58 NA Drosophila melanogaster 61 Pc FBgn0003042 FBtr0078405 2 1 1 126 3L 21310931 21310949 CAGTCGATCTAGTGTACGC 57 21310509 21310527 ATGTTTACCTCCGGTTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5847 FBgn0036985 FBtr0078191 2 1 1 96 3L 20410601 20410619 GTAGTGGCATGATGGTCGA 59 20410678 20410757 TTCACGTAGTTGCACTTTGG 59 NA Drosophila melanogaster 61 trbl FBgn0028978 FBtr0078235 2 1 1 111 3L 20393604 20393622 TCCACCAGATCTGTCAGAC 58 20390561 20393529 TACTGCAGTTTCGTTCTGG 57 NA Drosophila melanogaster 61 CG5585 FBgn0036973 FBtr0078242 2 1 1 80 3L 20340761 20340779 TGCCAAGATTATTTCGGCC 58 20340645 20340720 GAAGCTGAAAGTAACTTGTGAC 58 NA Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 2 2 2 94 3L 19990061 19990141 CTAGCAAGTTTGCAGAGCA 58 19990199 19990217 TGTGACACTTAGTGCACAC 58 NA Drosophila melanogaster 61 CG9279 FBgn0036882 FBtr0074976 3 1 1 81 3L 19535272 19535408 AGCTTCCAAAGAATCCAGTG 58 19535210 19535229 GGAGACAAGGTTACTTCTCC 57 NA Drosophila melanogaster 61 CG32212 FBgn0052212 FBtr0074932 1 1 1 100 3L 19481055 19481132 TGTTCAAATACGCCGTCCT 59 19481196 19481214 GTAAGCCAGAGGACCAGTG 59 NA Nonspecific Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075028 2 1 4 142 3L 19153780 19163565 GTGACAATCAATCCTGGGC 58 19139511 19139530 GTGTTTCCTTCCAGACACAG 58 NA InUTR Drosophila melanogaster 61 CG11637 FBgn0036822 FBtr0075065 3 1 1 80 3L 18885730 18885850 TAGCTGAAGGCCTAATGGA 57 18885891 18885912 CCTTGTCGTTATAGGTGATCAG 58 NA Drosophila melanogaster 61 CG18234 FBgn0036794 FBtr0300049 3 1 1 82 3L 18597499 18597577 ATCCCACGTTTATCATAACACC 58 18597620 18597638 GTGACAGCTGAGATGTTGG 58 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 3 2 2 199 3L 18033743 18033761 TTACGTATGTCCTCGCAGG 59 18034086 18034107 TTGAGAATATCCAACTCTGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32193 FBgn0052193 FBtr0075145 2 1 1 195 3L 17954848 17954867 ATATGGTATCGGATTTGCCC 57 17957923 17957942 GAATGTTTCAAACTGCTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG7441 FBgn0036763 FBtr0075141 1 1 1 80 3L 17843620 17843639 TCTAAAGGATGTCCCTCTGG 58 17843680 17843888 ACATGAGTGGACTTGTAAAGC 58 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 1 2 4 162 3L 17558813 17567900 GCGATATTACACCGAAATTCC 57 17558671 17558689 TTGCTCCGTCTTTATGTGG 57 NA Drosophila melanogaster 61 qjt FBgn0036730 FBtr0075223 2 1 1 166 3L 17472339 17472415 AACCTAATTTCAGGCTAGCCT 59 17472543 17472561 CATCGCTGAAATCGGACAC 59 NA InUTR Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 3 2 2 89 3L 17037746 17037822 GATTACTTTGATCGGAGATGTACG 59 17037680 17037701 TGCTTGACTATGAACTTGTTGC 59 NA Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 2 2 2 86 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774824 16774842 CTTCTCATACTTGGGCGGA 59 NA Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323,FBtr0075322 3 2 2 211 3L 16767352 16767370 GAACAGAAATCTCGCCCAG 58 16767608 16767626 ATCATGTTAGCGATTGGCA 57 NA DesignNoJunction Drosophila melanogaster 61 mRpS34 FBgn0260460 FBtr0075379 3 1 1 60 3L 16341659 16341677 ACTGGTATCGGAGGAAACG 59 16341700 16341719 GGTCAGTTTGTAGTGGACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13039 FBgn0036609 FBtr0075430 1 1 1 60 3L 16319707 16319725 TCAGATGCAATCCAACGAG 57 16319665 16319685 GGATTCCTCATGGTATTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5027 FBgn0036579 FBtr0075457 2 1 1 111 3L 16222732 16222807 AAGGAGTTCAAGGTTCGTG 57 16222881 16222900 TCCTTAAGGCATAATCCACC 57 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 3 2 2 60 3L 16016999 16017018 AAATGGATTAAGCCACAGCA 58 16022392 16022410 GACTGAACGTGGCTAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5830 FBgn0036556 FBtr0075521 2 1 1 91 3L 15988160 15988246 CCAGACAATGCAGTTCCTG 58 15988087 15988107 TTGCTAAGCTTCTCAAAGAGC 59 NA Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0273189 3 1 2 81 3L 15948346 15948370 CATATACCTTCTTACGTTCCTAACC 59 15948409 15948500 TGGCATCCCTTAGCTTACG 59 NA InUTR Drosophila melanogaster 61 Eig71Ej FBgn0014850 FBtr0075582 3 1 1 66 3L 15653889 15653907 TAAGGCGTTGTGATATGCA 57 15653777 15653795 ACATTCTCGCAATCCAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0075592 3 1 3 107 3L 15580171 15580191 GTCATATCGCTGCTCAATGAG 59 15579674 15580107 GATGTTTGGATACTCATTGTCCTG 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 1 1 3 101 3L 15516656 15516674 GTCCAATGATGGCTTTGAC 57 15515585 15515662 TCCAGTATGGTGACAAATCTC 57 NA Drosophila melanogaster 61 CG7275 FBgn0036500 FBtr0075547 3 1 1 97 3L 15492986 15493063 GAGGATTGCAACCTTTATACCT 58 15493120 15493139 GAGTAGTCAACATCGGTGAC 58 NA Drosophila melanogaster 61 Tollo FBgn0029114 FBtr0075607 1 1 1 60 3L 15230738 15230758 GTCCCAGAACAAGCTAAAGTC 59 15230778 15230798 CTGAAGCTGACTATTCCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 3 1 1 125 3L 14887314 14887334 GATCTTTACCAAGTATCGCCA 58 14887086 14887230 AAACTCTGTCGTTTGGTTACAC 59 NA DesignNoJunction Drosophila melanogaster 61 gnu FBgn0001120 FBtr0075697 1 1 1 123 3L 14796262 14796339 CTATAGAGATCCCGCATCCC 59 14796158 14796176 AAAGAGTCCGTATCTCGCG 59 NA Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699,FBtr0300190 1 2 2 80 3L 14771374 14771454 AAGAAGCACAGAAAGGACG 58 14771312 14771332 GGCTTGTTCGATATAGTCCTG 58 NA Drosophila melanogaster 61 Sox21b FBgn0042630 FBtr0075747 3 1 1 135 3L 14109453 14111555 GTTAAGAGCGGGCATAACG 59 14106673 14106691 GAACTTGTCCATCTGACCG 58 NA Drosophila melanogaster 61 CG8745 FBgn0036381 FBtr0075801 2 1 1 99 3L 13855090 13855108 CTTCGTCAATTCCGGATCC 58 13854889 13855028 ATGATAGGCATGGTCGAGAG 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075823 2 1 4 82 3L 13462163 13462247 CACATGGGAAAGGTCTTGC 59 13462099 13462120 ATCTTGAATCTTTCCAGCTGAG 58 NA Drosophila melanogaster 61 CG14120 FBgn0036321 FBtr0075868 1 1 1 60 3L 12880915 12880936 GAGGATTATGTGATCTGTGAGG 58 12880957 12880975 CTTTGTCCCAGTCCAACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 2 4 4 80 3L 12805256 12805274 ACAAGGAGAACGCAAATCC 58 12805315 12805395 GTGTGGGCTTATACGTATTGAG 59 NA Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 3 2 2 80 3L 12781722 12790795 CCTGGTCATGGAGTATTGCA 59 12781661 12781680 CTAACGGTATCCTCGCTGAG 59 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 3 2 3 104 3L 12743828 12744414 ACTCGTCGACAGATTCATCC 59 12744481 12744499 CCAGGACCTCTTGCTTCTC 59 NA Drosophila melanogaster 61 CG9760 FBgn0036259 FBtr0273438 2 1 1 84 3L 12151411 12152259 CTCTTCTTCACGGTAACCGA 59 12151346 12151364 CTTTCTTTGGCGTGACCAC 59 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 2 2 2 80 3L 11999278 11999599 AACTTTGAACAGATGCTCTCG 59 11999639 11999659 AATGGCTACATTTCCAAGCAC 59 NA Drosophila melanogaster 61 CG6947 FBgn0036233 FBtr0076045 3 1 1 81 3L 11971695 11971719 GGATAGTGGTGCTTATATTCAATCG 59 11971758 11971843 GTTTCCGGAGAATGTGCAG 59 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 1 4 4 80 3L 11780325 11780345 GAAACAATGGTCATTCCTCGG 59 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 Muc68D FBgn0036203 FBtr0076119 1 1 1 89 3L 11765161 11765239 GCTAGTCGTAAGAGTCCTATGG 59 11765093 11765111 CTGGATCCAAACGATTGCC 59 NA Drosophila melanogaster 61 CG32086 FBgn0052086 FBtr0076147 1 1 1 104 3L 11576536 11576619 TTAACCGCAGATATGCCCA 59 11576450 11576468 CACCTTCCTCCAGACATCG 59 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784,FBtr0301967 1 5 5 81 3L 11109448 11109535 ACAATACACAGGATCTGTTCCA 59 11109388 11109406 AGCTGGGCATAGCTATACG 59 NA Drosophila melanogaster 61 alphaTub67C FBgn0087040 FBtr0076393 1 1 1 189 3L 9674512 9675016 AAATGCGCGAAGTAGTCTC 58 9675169 9675187 AAGGTCCTAGCATCGTTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3306 FBgn0036016 FBtr0076380 3 1 1 60 3L 9594755 9594773 ATCCAGATACGTTGGTCCC 58 9594794 9594815 ATAAATGTAGACACCCATCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uch-L3 FBgn0011327 FBtr0076472 2 1 1 108 3L 9469788 9469886 TTATTCGCGAATTCGGATGC 59 9469699 9469719 TTGAACAGGAAGATCAGACCA 59 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113322 2 1 5 95 3L 9424350 9424368 CTGTGATAACGACCAGGGA 58 9424426 9427010 TCATCCACATAGCTCGTCTC 59 NA Drosophila melanogaster 61 Hsp67Ba FBgn0001227 FBtr0076495 1 1 1 60 3L 9372129 9372147 GAATGTGAAGCAGTTCGCC 59 9372087 9372106 CACGATGCAGTTATCGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42509 FBgn0260235 FBtr0300644 3 1 1 200 3L 9278140 9278395 GTATCTCAATTGCGCATCGT 59 9278558 9278576 ATCTTCTCCGTCTCTTGGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Cp18 FBgn0000357 FBtr0076571 1 1 1 160 3L 8719941 8720133 AAGTTCATGTGCATCTGCC 58 8720257 8720275 TATCCACCACCGTATGAGG 58 NA Nonspecific Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089566,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089562,FBtr0301155 3 8 13 90 3L 8630658 8630677 AGACTAAGGTCTATCAGCCC 58 8631287 8631377 GTGTTTACCACATTGTACGG 57 NA Drosophila melanogaster 61 CG5989 FBgn0017429 FBtr0076649 1 1 1 80 3L 8596057 8596077 GATGTCAAAGACATATTCGCC 57 8595936 8596018 AAGGTTGACTAGGTTTCTAACG 58 NA Drosophila melanogaster 61 CG6915 FBgn0035898 FBtr0076658 1 1 1 90 3L 8467838 8467916 TCTAGCCTTGTTCGACACC 59 8467766 8467784 TTCTGCCAGAGACTCACAG 59 NA Drosophila melanogaster 61 CG33057 FBgn0053057 FBtr0076678 2 1 1 60 3L 8397981 8398002 AGAATATTACCCATGTGAGCCA 59 8397942 8397962 CAATGTCTGTAATAGGTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7120 FBgn0035888 FBtr0300279 2 1 1 85 3L 8393714 8393732 TCTTATCAGAGCCATGCCC 59 8393778 8393858 TGTCGTCCACCTTATTATAGCC 59 NA Drosophila melanogaster 61 CG7375 FBgn0035853 FBtr0076722 1 1 1 96 3L 8189972 8190249 TATTCTTGGAACCCAATCCC 57 8189895 8189915 GCCTTCTTTACATTGTTCTCG 57 NA Drosophila melanogaster 61 MED24 FBgn0035851 FBtr0076694 3 1 1 80 3L 8186309 8186330 GTGGAGATGTATACAATCTGGC 58 8186368 8186447 AGTTAAGAACCAACGGATTAGC 58 NA Drosophila melanogaster 61 CG42445 FBgn0259916 FBtr0300199 3 1 1 144 3L 8148674 8151872 ATGGATGAATAATGCGAAAGCC 59 8148551 8148569 CTCAATGGTCAGCCATTGG 58 NA InUTR Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0300412,FBtr0076768,FBtr0300413 3 4 4 83 3L 7921492 7921576 TCGATCAGACTTGACTCTACG 59 7921429 7921447 TACGTACGGCTCAATGTCC 59 NA Drosophila melanogaster 61 sphinx2 FBgn0052382 FBtr0300362 2 1 1 60 3L 7433079 7433099 AAAGCATGTATCCGGAGTAGG 59 7432979 7433000 GCTCCAGCTGCATAATTATACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17742 FBgn0035746 FBtr0076922 1 1 1 61 3L 7154512 7154530 AACGCCAACAACATTCACC 59 7154469 7154489 CGAATAATCCGATTTCTCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 2 2 2 70 3L 7125770 7126229 TTTCCGAGCAATTCAACGC 59 7126263 7126281 GAACTCGTCATCACTGGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG14910 FBgn0035700 FBtr0076965 2 1 1 63 3L 6454911 6454930 GCATTGGCTATAATCCGCTC 59 6454956 6454974 AAGGTGTCCACTTCGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7386 FBgn0035691 FBtr0076999 1 1 1 86 3L 6184148 6184166 GAAAGACGTTCGGGAAAGC 59 6184215 6184292 TGTCACAAACCTTGCATTCG 59 NA Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077124,FBtr0077123 1 2 2 60 3L 5744200 5744219 ATCGAGCATGATCTGTTCGT 59 5744159 5744178 TCATCTTCTTGATGCATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077123 2 1 2 85 3L 5744694 5744960 TCGCTTACATTTAAGCTGAGAG 58 5744630 5744648 TCTTGATCTCATCGTCGCT 58 NA InUTR Drosophila melanogaster 61 Blimp-1 FBgn0035625 FBtr0077089 2 1 1 82 3L 5637720 5637842 GCCAAATGTTAAGACTGAAGG 57 5637886 5637904 TTGGAATGCCTTCGAATGG 58 NA Drosophila melanogaster 61 sinu FBgn0010894 FBtr0300070 3 1 2 63 3L 5553947 5553966 TACTGTGTTAACCCTGGTGG 59 5553728 5553921 TTTCCTCTTGGTTGGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1273 FBgn0035522 FBtr0073231 3 1 1 94 3L 4274011 4274029 GGCTGCATTTATCGTCCTG 59 4274087 4274168 CCATGACAGGATCCTCCAG 59 NA Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 2 2 2 80 3L 4241162 4241243 CTCAATTATGGAAAGATACCTGGC 59 4241282 4241300 CTTGGGCGAGTAGATGGAG 59 NA Drosophila melanogaster 61 Gr64b FBgn0045478 FBtr0073195 3 1 1 82 3L 4029936 4030007 CTTGGTCCATAGAGGTTCAG 57 4030052 4030070 GAGGTAGAAGAATCCGCTG 57 NA Drosophila melanogaster 61 Gr64a FBgn0045479 FBtr0073194 1 1 1 80 3L 4027953 4027974 AGTCTCATTCTACTTTCGTGTG 58 4028013 4028083 CCAACGTAGTTTGTTGAAGAC 58 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073168 3 1 3 75 3L 3959966 3959986 GATAGTATTCAGCCCATGGAC 58 3959843 3959861 AAATCACCTTGCCATCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Acp63F FBgn0015585 FBtr0073182 3 1 1 80 3L 3816143 3816162 TGGTCCAAATCCAAGTTACC 57 3816028 3816103 GGAATTAGTTCGATGAATCCTG 57 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 3 1 1 219 3L 3159214 3159290 TAAGAAGGCGGATAAGCCC 59 3159013 3159031 AACCAGGTTGGTAAACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717,FBtr0300715,FBtr0300714 2 4 4 173 3L 1876984 1877008 GCGGAGGATCAATTATATCTAATCG 59 1876769 1876859 CTCGAAGTCGTATTTGTAATACTCG 59 NA Drosophila melanogaster 61 CG33966 FBgn0053966 FBtr0100007 3 1 1 97 3L 1234461 1234544 ATATTCCGATTGGGCACCA 59 1234605 1234623 TTGCTGGGATCATAGCAGG 59 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573,FBtr0072572 3 2 2 95 3L 335992 336011 ATCGGACATGTTCTACACCA 58 335845 335935 GAGAACATCATGGCATACGA 57 NA Drosophila melanogaster 61 CG34140 FBgn0083976 FBtr0110975 1 1 1 82 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183628 183647 AAAGTTCGAAAGTCGTGGAC 58 NA Nonspecific Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 3 4 4 126 3L 177071 177155 CCTCACTGAGACCATCGAG 59 176963 176981 GTAAAGCTCGTTGTGCCAC 59 NA Drosophila melanogaster 61 5SrRNA:CR33439 FBgn0053439 FBtr0086431 1 1 1 60 2R 15621995 15622013 ATACATCGGTTCTCGTCCG 59 15621953 15621971 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30249 FBgn0050249 FBtr0087963 1 1 1 60 2R 8221477 8221495 TCGTCTAGTGGTTAGGACC 57 8221435 8221453 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 gsb-n FBgn0001147 FBtr0072461 2 1 1 93 2R 20928728 20928863 CCATCAAGACTATTCCAAGCTG 59 20928656 20928674 GTCGCTGAGGTGTAGTGAG 59 NA Drosophila melanogaster 61 Cyp9c1 FBgn0015040 FBtr0072321 3 1 1 90 2R 20519472 20519549 AATTGATGAAGGCACTTCGG 59 20519601 20519620 TTTCGATACTTCATGGCACC 58 NA Drosophila melanogaster 61 CG15874 FBgn0035004 FBtr0072356 1 1 1 60 2R 20320106 20320125 CCTCCATGTTATCAGGTGGA 58 20320065 20320083 CTGGCCAAAGGTTCAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 1 2 2 80 2R 19885415 19885498 GGAGAGTCATTACCAATACGGA 59 19885356 19885374 TACTCTCGCAATCTCACCG 59 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 2 3 3 246 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596356 19596376 TGAACATGGACTTGATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)not FBgn0011297 FBtr0072095 3 1 1 78 2R 19596954 19596973 CACCAACTACAGTCTGTTGC 59 19594245 19594265 GAGAGCCGAGTAGATGTACAC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr59b FBgn0045482 FBtr0071965 1 1 1 60 2R 18970644 18970662 TGGAGTGAAGTTCGTTGGA 58 18970746 18970767 TCGTACTATTCGCATAGATCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Fib FBgn0003062 FBtr0071982 3 1 1 128 2R 18961158 18961557 TCTCCGTTGAGACCAATGG 59 18961048 18961066 GGTAGAGAACCTTCGAGCC 59 NA Drosophila melanogaster 61 CG42566 FBgn0260768 FBtr0301270 3 1 1 81 2R 18550361 18550449 CTTACCTTCCTTTGGCCCT 59 18550494 18550512 GTTGCAAGATGGACAGTGG 59 NA Drosophila melanogaster 61 CG34446 FBgn0085475 FBtr0112750 2 1 1 104 2R 18535187 18535205 CCTTATTGCAGGACCAAGG 58 18535101 18535119 GTATACGCCCAGGTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3927 FBgn0034739 FBtr0071853 1 1 1 80 2R 18483173 18483191 CCATCAGGAATAGGGCTCC 59 18483234 18483380 CCTCCATATAGGCGACTTCG 59 NA Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840,FBtr0071841 3 2 2 62 2R 18314193 18314213 GCATGATGATTGACACAAGTG 58 18314096 18314115 AATTCAACTGATCCGATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 qkr58E-1 FBgn0022986 FBtr0071843 2 1 1 94 2R 18301782 18301925 TAAAGACGCACAGATCACG 58 18301706 18301724 CGAGTGCTTTGATGTTTGG 57 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 3 4 4 80 2R 18215620 18215706 GATAAATTCCTTCTGGAGAAACTGG 59 18215742 18215762 GTGGAAGATCATCTTCTCGGT 59 NA Drosophila melanogaster 61 CG6613 FBgn0034694 FBtr0071758 1 1 1 95 2R 17990877 17990955 AAGAGTTTGGAGGTCCTGG 59 17991014 17991032 CAGGAAGGAGTCCTTCAGC 59 NA Drosophila melanogaster 61 CG42381 FBgn0259727 FBtr0299989 1 1 1 80 2R 17557187 17557268 GTCTGACCAAGAATCACTACC 58 17557127 17557145 TGTGCCACTTTAAACAGCA 58 NA Nonspecific Drosophila melanogaster 61 CG10080 FBgn0034641 FBtr0071658 3 1 1 81 2R 17514581 17514665 GCTGTACAATGTCATTTCCG 57 17514707 17514727 GTCTTCGTTGAAATCAGAGTC 57 NA Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071700 1 1 2 107 2R 17406363 17406442 CCTTATGAATCTGGGAAATGC 57 17406276 17406296 ATGATTTCCAGAAAGGTCTCC 57 NA Drosophila melanogaster 61 cv-2 FBgn0000395 FBtr0071610 1 1 1 85 2R 17246680 17251212 GAATGCCAGAACGGATTCG 59 17246613 17246634 CAAGTTCCATTCGACTTATCCA 58 NA Drosophila melanogaster 61 Pros29 FBgn0261394 FBtr0071522 3 1 1 154 2R 16882805 16882960 CCTGAACGACAACATGGTC 58 16883078 16883096 GTTTGATGTCGCAGAGGTG 59 NA Drosophila melanogaster 61 18w FBgn0004364 FBtr0086309 3 1 1 60 2R 16002225 16002243 GCCCACGATATCTACTGCT 59 16002267 16002285 GGTTGCCAATCAGTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33454 FBgn0053454 FBtr0086565 2 1 1 87 2R 15138673 15138752 TTCTTGCCCGTATGGTACG 59 15138604 15138626 GCGTGATAAATAATCTCCAGAGG 59 NA Drosophila melanogaster 61 CG5493 FBgn0034364 FBtr0086713 3 1 1 81 2R 14504759 14504777 GAGATCGATAGCCGAGAGC 59 14504619 14504718 CCAGATTGTCATTTATGTAGGCC 59 NA Drosophila melanogaster 61 Rgk2 FBgn0085419 FBtr0112633 3 1 1 112 2R 14433672 14433766 TTATCACATCACAGGAGGGC 59 14433841 14433859 CTTCAATATGCCGACGAGC 59 NA Drosophila melanogaster 61 CG5226 FBgn0034355 FBtr0086698 1 1 1 80 2R 14409881 14409900 TCTTGGTGTCTTCAGTGGTC 59 14409941 14410034 GCTCAATCATACCCAAATCGG 59 NA Nonspecific Drosophila melanogaster 61 GstE7 FBgn0063493 FBtr0086675 1 1 1 60 2R 14295038 14295056 AAAGCTGCCCTACTACGAG 59 14295077 14295098 GATGAAGGACTCAAATGTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18539 FBgn0034325 FBtr0086761 3 1 1 113 2R 14185878 14185899 AGAGTCTCTTGAAGATCACCAC 59 14185973 14186057 CTGCCTCCACCATAGTGTC 59 NA Drosophila melanogaster 61 CG5084 FBgn0034288 FBtr0086804 1 1 1 108 2R 13906784 13906802 CAACCAGATCCGTCTCCAG 59 13906873 13906952 CTTGTCGAAAGTGGACACAG 59 NA Drosophila melanogaster 61 CG6370 FBgn0034277 FBtr0089559 1 1 1 80 2R 13652665 13652685 GATTCCTCTTTGTCCAACTCC 58 13652546 13652624 AGGCTTGACTTCCTTATCCT 58 NA Drosophila melanogaster 61 CG10934 FBgn0034263 FBtr0086859 1 1 1 60 2R 13610345 13610364 GATAATGGTCACTCATGCCC 58 13610386 13610405 ATAGTATCTGTACGTCCGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 3 3 3 92 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563332 13563424 ACTAATGGCCTGGATTTCGT 59 NA Drosophila melanogaster 61 CG42239 FBgn0250868 FBtr0290307 3 1 1 90 2R 13460457 13460476 CACATTCGAGCTGTTTGTCC 59 13460525 13460616 CTTGAAGTTCTTCATATCGCCAG 59 NA Drosophila melanogaster 61 CG14480 FBgn0034242 FBtr0086827 2 1 1 131 2R 13452707 13452726 TTTCTGGAATTGGTCGATGC 59 13452817 13452901 TTGCAGTTTCTTGTCTACACTC 59 NA Drosophila melanogaster 61 CG34193 FBgn0085222 FBtr0112386 1 1 1 60 2R 13397548 13397566 CAGGTGGGACATGGATCTG 59 13397655 13397675 CCCAATTCTTCGTCATAGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 3 2 2 60 2R 13390421 13390440 AAATCGTACTCTTCTGCCTG 57 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6522 FBgn0034223 FBtr0086954 1 1 1 96 2R 13354508 13354588 CTGGCAAGAATTCCACTCG 58 13354430 13354448 TCCTTTCCTGCACGATCTG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994 3 1 7 81 2R 13248647 13249495 CTATGACAACTTCCAATTCTCTGG 59 13249534 13249553 GGGCTGATAAACTGGAATGC 59 NA Drosophila melanogaster 61 Ugt37c1 FBgn0026754 FBtr0087076 3 1 1 60 2R 12731168 12731189 TACAGGGATCGACCTTTAACTC 59 12731129 12731147 TCAGAACGTAATCCACCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 3 4 4 92 2R 12416663 12416686 CACTGATCTGTATAATACTTCGGC 59 12416735 12416873 AAGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 CG33458 FBgn0053458 FBtr0087085 2 1 1 85 2R 12374728 12374747 CACTATACAGAACAGCCCAC 58 12374794 12374863 AATCGGACGTATGCTATCTG 57 NA Drosophila melanogaster 61 Atg9 FBgn0034110 FBtr0087141 3 1 1 60 2R 12182738 12182757 AACAGCATATGTGCATCGAC 59 12182778 12182798 AGAACTCGGTGATAGATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777,FBtr0113082,FBtr0087337,FBtr0113083 3 4 5 140 2R 11443519 11449340 GATCGTAATGTATTCAACGCAC 58 11449441 11449459 GTCGTAGCTGGGTAAATCC 57 NA DesignNoJunction Drosophila melanogaster 61 Ercc1 FBgn0028434 FBtr0087448 3 1 1 202 2R 10741047 10741124 ATCCACACCAGAAGCTACTC 59 10741289 10741307 CTATTTGCTGAGGAACGGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 3 3 4 181 2R 10641644 10641662 CTGCTGTGGGTAAATCGAC 58 10641385 10641501 GATTCTCATTGCTTTCTCGTG 57 NA Drosophila melanogaster 61 CG33468 FBgn0053468 FBtr0087503 3 1 1 120 2R 10494356 10494442 CTCCCAATAGTGCATATCCC 57 10494255 10494273 CCAAAGTACTCCACTTCGG 57 NA Drosophila melanogaster 61 L FBgn0001332 FBtr0087492 2 1 1 80 2R 10369285 10382664 TCTTTAAGCACGCCTATGG 57 10382708 10382726 GGGTGAGACCATACAACAG 57 NA Drosophila melanogaster 61 mRpS16 FBgn0033907 FBtr0087578 1 1 1 86 2R 10060805 10060888 ATTGTCGTCATGGAGAGGC 59 10060737 10060755 GTTGTAATCGTTGGGCAGG 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 1 12 12 85 2R 9306901 9306985 GCAACCTCGTTTATACTTACGT 58 9306837 9306855 CAGATGGGTAAGCCAGGTC 59 NA Drosophila melanogaster 61 CG33138 FBgn0053138 FBtr0087732 3 1 1 98 2R 9060136 9060155 ACTACGGACTTCACTTCCAG 59 9060216 9060295 GCCAGTTGTTGAAGTCACC 59 NA Drosophila melanogaster 61 bic FBgn0000181 FBtr0087783,FBtr0087782 2 2 2 60 2R 8758037 8758056 AAGAAGCTGTCGGTAAACAC 58 8758076 8758097 CATCGTTCTTGATGATGTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13165 FBgn0033707 FBtr0087892 3 1 1 83 2R 8184836 8185029 GTTGTACAGGTACCTGCCA 59 8185075 8185094 TACATCTTGTCGCCCTTCTG 59 NA Drosophila melanogaster 61 Cyp6g2 FBgn0033696 FBtr0088009 2 1 1 208 2R 8076770 8076790 AAGATGATCGAGTCACTGGAG 59 8076531 8076600 GGTTGAGGAAAGTACTGGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG33964 FBgn0053964 FBtr0100005 2 1 1 103 2R 8070988 8071006 AAGAGCAAACAAGAACGCC 59 8071073 8071152 TAGATCCACCTCATGGCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34231 FBgn0085260 FBtr0112424 3 1 1 81 2R 7873601 7873620 ACAAACGTCTGGAATACTGC 58 7873661 7873781 GCAACTGTATAAACCTTGACAG 57 NA Drosophila melanogaster 61 Damm FBgn0033659 FBtr0088061 1 1 1 120 2R 7753093 7753111 ATACAAACCTTGTGCGAGG 58 7752913 7753010 GAACTTGTTTCGAACCTGTC 57 NA Drosophila melanogaster 61 CG34230 FBgn0085259 FBtr0112423 2 1 1 125 2R 7749185 7749203 TACCTCTCAGTTTCCTGCC 58 7749290 7749366 AAAGTACAAGCCTAGAAGGGA 58 NA Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065,FBtr0088066 1 2 2 60 2R 7676065 7676085 ATATAGCGGTAATGGGTTCCT 58 7676025 7676043 TGACCCACATTCCATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7763 FBgn0040503 FBtr0088135 3 1 1 60 2R 7302607 7302625 CTACTGGATCGACGTGACC 59 7302649 7302667 TCCTTTGGTCACAGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 1 3 3 80 2R 7174158 7174231 AGGAAATTATGGACTCACCTG 57 7174098 7174118 TTATGATGCGGGATTCATCTG 58 NA Drosophila melanogaster 61 CG13216 FBgn0033591 FBtr0088193 3 1 1 60 2R 7125825 7125843 TTAGCCCGGGTCTATATCC 57 7125783 7125802 GGATACAATCCTGGATTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9084 FBgn0033582 FBtr0088197 2 1 1 80 2R 7106630 7106649 CACTTTGCAATACGACAGTG 57 7105869 7106592 CTGATATGGGAGTCATAAACTCTC 58 NA Drosophila melanogaster 61 CG9084 FBgn0033582 FBtr0088197 1 1 1 80 2R 7105763 7105782 CACTTTCCGGATACGATTGC 59 7105642 7105721 CTGTTAGGGCATCGTTAAGC 59 NA Drosophila melanogaster 61 CG30490 FBgn0050490 FBtr0088209 2 1 1 65 2R 7006864 7006884 ATGCTCAGGATCTAGGAAACG 59 7004529 7006838 ATATTATTCCCGCTTGCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12309 FBgn0033542 FBtr0088215 2 1 1 60 2R 6613179 6613198 CCACTTCAATTTGGGAACAC 57 6613219 6613239 TGTCGTAACCGTATACTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12895 FBgn0033523 FBtr0088314 1 1 1 120 2R 6324753 6324833 CAATTTATAGTATCTACGGTAGGCC 58 6324657 6324677 CATCGTAGTCCACAATTTCCC 59 NA Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088410 2 1 2 179 2R 5984068 5984086 AATGGATCCGTCTGGACAG 59 5984636 5984759 AATGACGTCAATCAGTGGGT 59 NA InUTR Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088429 1 1 2 94 2R 5955811 5955885 GAATTGTCTATCGCGCACG 59 5955735 5955754 ACTAATTGGCAGACCATCCT 58 NA Drosophila melanogaster 61 CG34220 FBgn0085249 FBtr0112413 3 1 1 86 2R 5930866 5930940 TCGATGAATCTGTCAAGCC 57 5930798 5930816 GGGCCTGTTTATTCTGTGG 58 NA InUTR Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 1 2 2 80 2R 5915136 5915219 GAACCTCAAAGTGAGAGCTG 58 5915261 5915280 ATAAACACCTGTTTCCCGAC 58 NA Drosophila melanogaster 61 CG1665 FBgn0033451 FBtr0088478 1 1 1 80 2R 5728310 5728331 TACCAACATTAATGCGAAGACC 59 5728370 5728463 TTGAACAAGCGATAGCTTCTG 59 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0088475 2 1 2 213 2R 5701198 5702740 GGCTAAGGAATGTATCACCC 57 5703108 5703126 TTGATCCTGCGCAAATAGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 3 3 3 84 2R 5649051 5649131 TGATATACGTTGCGGTTGTG 58 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 1 2 2 82 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185029 5185780 CTGATATGGCAGCCTTTATGAC 59 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 1 2 2 106 2R 5175035 5175053 TGGACTCAGAACCACTGTC 59 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766 3 1 2 76 2R 4257373 4257446 AATTTGATCGGAGCATGCC 59 4257315 4257333 ATTCTTGGACCAATCGACC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11635 FBgn0033283 FBtr0088739 1 1 1 60 2R 4246365 4246383 CAAATGACTTGTGCTGCGA 59 4246407 4246425 TACAGCTCGTCGAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055,FBtr0088815 1 2 2 80 2R 4027799 4027819 AAATACTACACCTGGATGGCT 59 4027646 4027758 AATGGCATCATGGGTTAGTG 58 NA Drosophila melanogaster 61 CG42516 FBgn0260390 FBtr0300661 2 1 2 70 2R 4018672 4018773 CATTTCTAACAAGGGCCCA 57 4018620 4018638 CTCGTACTCCGAATCGGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11210 FBgn0033259 FBtr0088781 2 1 1 91 2R 3987899 3987917 ATACGTAAGGAACGCCGAG 59 3987968 3988048 CTGGTTTAACCATGAGAGTATCC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 Hey FBgn0027788 FBtr0088869 1 1 1 192 2R 3884915 3885346 CAAGGAACAAATCTCGCCC 59 3884741 3884759 GGTCAGCTGAAGGATTTCG 58 NA Drosophila melanogaster 61 phr FBgn0003082 FBtr0088839,FBtr0088838 2 2 2 215 2R 3714183 3714201 GAGGACAACACAAAGCCTC 58 3714440 3714460 ACAGGTCGTCATAAGTGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 phr FBgn0003082 FBtr0088838 2 1 2 172 2R 3713043 3713115 TCAAGATTGTTCTTCCGCT 57 3713250 3713269 GTAATCCGGCTTAGAAACCA 57 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 1 3 3 186 2R 3414692 3414710 CAACGTGGACATCACAGTG 59 3414457 3414475 CAGACTCCTGGAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12164 FBgn0033158 FBtr0088963 3 1 1 103 2R 3199609 3199691 AAGTCAAGGTTCCCGTCTG 59 3199758 3199776 CTTAACCTCCTTCCAGGCA 59 NA Drosophila melanogaster 61 sced FBgn0013732 FBtr0086110 1 1 1 60 2R 2546198 2546216 TGTTCCGCAGAGTAATCAG 57 2546239 2546258 GTATCCCGTAAGGTCTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34211 FBgn0085240 FBtr0112404 2 1 1 60 2R 1934747 1934766 TCTACCTGGTCCTTGTTTCC 59 1934789 1934807 AAGGTGGACTCTACAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 2 1 1 63 2R 674683 674704 GCAAAGCTTCTATGATAGATGG 57 674579 674660 TTAAGTGGGTTTCGATCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 2 2 2 106 2R 358353 358371 CAGTCTTGGCTGATGTCAG 58 346013 358283 ACTTCTAACACTCGGGTCG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2648 FBgn0065055 FBtr0091677 1 1 1 148 2L 8042319 8042337 GAACTAAATCGCTGCGCTC 59 8042189 8042207 GATTGTCTGAAGTTGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR15280 FBgn0028867 FBtr0100604 3 1 1 90 2L 14782951 14782969 TATAACTCCAGTCCGTGGA 57 14782819 14782898 TCAGTACCAGTCTGTTTGTG 57 NA Drosophila melanogaster 61 snmRNA:158 FBgn0065104 FBtr0091750 2 1 1 60 2L 5206232 5206251 CAAGAAGGATCACTCTACCC 57 5206273 5206292 TATCCCATCTAACCCTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111258 2 1 4 86 2L 22431076 22432692 TTTAAAGCAATGGTACCGGT 57 22432741 22432759 CAACCTGTATTTCGCAGGT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8679 FBgn0032934 FBtr0081488 2 1 1 60 2L 21217638 21217656 CCCTGTTCCATCAGTACGA 58 21217596 21217618 TCCTGACTAATAGCATCATCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9253 FBgn0032919 FBtr0081468 3 1 1 111 2L 21143496 21143576 AAGATCTCGGTCTCAATGAGG 59 21143649 21143667 ACATCCTTGCCCTGTAAGG 59 NA Drosophila melanogaster 61 CG33322 FBgn0053322 FBtr0081455 1 1 1 81 2L 20815307 20815433 CTTCATGGAGCTTCTTAAGGAC 58 20815247 20815265 GTGTTCGGCCATTATGGTC 59 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 3 2 2 236 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813641 20813659 GATTTACGTACTGCCGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081316 1 1 2 81 2L 19794633 19794655 TCTACGATCTATATGTTCCCGAG 58 19793394 19794597 GGAATCACACTTAAGTAGTTGTCG 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0299519,FBtr0302107,FBtr0299520,FBtr0081281 1 6 6 82 2L 19515103 19515181 TATCCAATGCGAACCTCGA 58 19515039 19515057 ATCCGTACGTGTAGCACTC 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081229 1 2 4 161 2L 19183450 19183519 GGCCAAATTCCACTTAGCTG 59 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 amd FBgn0000075 FBtr0081153 3 1 2 110 2L 19110341 19110420 TACGTGAGAGGGATGTCCT 59 19110494 19110512 CCAGATCCTTGAGGACCTC 59 NA Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 3 2 2 87 2L 19009005 19009023 CAAGCAGACCTTGAAGACC 58 19008531 19008954 GATCTCGGACTTCCTCAGG 59 NA Drosophila melanogaster 61 CG31792 FBgn0051792 FBtr0081137 3 1 1 92 2L 18998786 18998807 GACACCTTTATTCAGTTTACCC 57 18998860 18998932 AGCGATTCCAATCTCTTGG 57 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 3 2 2 104 2L 18862251 18862269 TATTAGGGACAAGCGACCC 58 18862104 18862184 GCATTGTAGCAGGTTCTGAG 59 NA Drosophila melanogaster 61 CG17321 FBgn0032719 FBtr0081110 3 1 1 92 2L 18853657 18853675 CTCATCACGTGTCTCATGC 58 18853729 18853811 CAGGTACATCCACGTATTCAC 58 NA Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 1 2 2 81 2L 18712241 18712259 GCGTGATCTATGCCAAGAC 58 18712100 18712196 CGATAACAGATCACCGCCT 59 NA Drosophila melanogaster 61 CG10383 FBgn0032699 FBtr0089628 3 1 1 96 2L 18693037 18693055 GAACTTCACGTGATGCTGG 59 18692899 18692979 GAATGTCCTCAATGGGATCCT 59 NA Drosophila melanogaster 61 CG10414 FBgn0032691 FBtr0081079 2 1 1 88 2L 18611388 18611406 GATCATGCCCAGGATAACC 57 18611252 18611336 ATGTAGGGAATTGTTCGCG 58 NA Drosophila melanogaster 61 CG31788 FBgn0051788 FBtr0081056 1 1 1 151 2L 18257754 18257834 TTGAGTCTTTCGATTGGACCT 59 18257623 18257643 AATGAAAGCATCATCCTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15153 FBgn0032663 FBtr0081045 1 1 1 80 2L 18091253 18091477 CGAGATAAGCTACAAGATCACG 58 18091194 18091212 CAATCGGTGTCATAGGCAG 58 NA Drosophila melanogaster 61 CG31741 FBgn0051741 FBtr0081032 1 1 1 80 2L 18084679 18084829 CCACACTTTCCTACTTTGACAG 59 18084866 18084888 GAGAGTAAAGTTCATGACCTTGC 60 NA Drosophila melanogaster 61 Sytalpha FBgn0261089 FBtr0080987 1 1 1 80 2L 17601831 17601922 CTTGTATAGAAGTCATTCTCAGCC 59 17601959 17601979 AGACTCACATGCAAATTACCC 58 NA Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 3 1 1 62 2L 16336230 16336309 GGAGATCCCATAGACAAGCA 59 16336187 16336208 CACGGAATGAATCTTCATTACC 57 NA DesignNoJunction Drosophila melanogaster 61 fzy FBgn0001086 FBtr0080833 2 1 1 87 2L 16311403 16311517 ACACTTTCTGGTGAACAAAGAC 59 16311565 16311583 GACATTGCTCTCGTTGCTG 60 NA Drosophila melanogaster 61 CG4892 FBgn0028884 FBtr0080816 1 1 1 60 2L 16134147 16134165 AGGTGACTTCAATCGACGG 59 16134187 16134207 CATCTTGGATGGAACCTTACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31823 FBgn0051823 FBtr0080810 2 1 1 182 2L 15899210 15899308 CCAGCGAATCAAATAGTTACCA 58 15899049 15899068 CATCCCTTCAATCCGAATGG 58 NA Drosophila melanogaster 61 CG31824 FBgn0051824 FBtr0080789 2 1 1 102 2L 15886712 15886730 CTGTCAACTGATGCAACCC 59 15886793 15887914 TTGCTTGTATCTTTCCCAAGTG 59 NA Drosophila melanogaster 61 CG18482 FBgn0028891 FBtr0080741 2 1 1 82 2L 15403664 15403682 GTCAAACGAGCAAATTGCA 57 15402377 15403621 GTTGCTAACAGGTAGTAAACAG 57 NA Drosophila melanogaster 61 HDC02577 FBgn0250834 FBtr0080673 1 1 1 112 2L 14802900 14802920 CTCACAAACGATCCCAAAGAG 59 14803045 14803063 ATACTTCCTGTCGTCCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 3 2 2 80 2L 14617628 14618076 GACCAAGAATATAGCGAAACTGG 59 14618115 14618134 GGCTTTATCGACTGCAACTG 59 NA Nonspecific Drosophila melanogaster 61 CG15283 FBgn0028844 FBtr0300837 1 1 1 60 2L 14450837 14450856 TTAGATCCTGTCGAGCTCTG 58 14450796 14450816 GCAAGAGAACATCGTCTTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31769 FBgn0051769 FBtr0080602 1 1 1 96 2L 14110566 14110641 TCAATTACGGATGGGAGCA 58 14110488 14110506 TACGACTGTTTCAAGCACG 58 NA Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 2 2 2 91 2L 13903705 13903790 ATCTTTACAGATCCCTCTACACC 59 13903636 13903654 GATTTCGTGCTGGAACAGC 59 NA Drosophila melanogaster 61 CG33307 FBgn0053307 FBtr0080565 2 1 1 80 2L 13841023 13841104 TTCGAAGAGTTCAAGGACTCTC 59 13840964 13840986 GAGTGTCTTATATTGCAAGTCGG 59 NA Drosophila melanogaster 61 b FBgn0000153 FBtr0080542 3 1 1 123 2L 13822063 13822081 GTGATGGCATCTTCTGTCC 58 13822701 13822719 AAGATAATCAGCGGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31845 FBgn0051845 FBtr0080533 2 1 1 89 2L 13777755 13777773 AGTTCAGTCCACTCACCTG 59 13777825 13777906 ACAGCATTCCTTCTGTTTGC 59 NA InUTR Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080577,FBtr0080576 1 2 2 80 2L 13775517 13775535 CGTCATCACAAACGTGGTG 59 13775391 13775474 CAAGGATTCCAGATGACCGT 59 NA Drosophila melanogaster 61 Vm34Ca FBgn0003983 FBtr0080521 3 1 1 178 2L 13411501 13411519 GATAAGATGCTCGGCTCCT 59 13411341 13411360 CTGAACAGGTAGTTCTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16820 FBgn0032495 FBtr0080452 1 1 1 97 2L 13249666 13249684 CGTCTCAGTTTACATCGCC 58 13249745 13249821 ATCATGGCATTCAGGTTGC 58 NA Drosophila melanogaster 61 Pk34A FBgn0028410 FBtr0080432 1 1 1 121 2L 13158819 13158840 TGCCTTGCTAGATTTATTGGAG 59 13158983 13159001 ATGATGAGTGGAACTTGGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ACXB FBgn0040509 FBtr0080414 3 1 1 89 2L 12920285 12920376 CATCCGAATTGGAACAGGTG 59 12920425 12920446 CAAACGTGGTCATTATAAAGGC 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 1 1 8 87 2L 12458207 12460590 AAGATCTGGTCAAGTCGCA 59 12458138 12458156 ATCTTGTCCATCAGCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290239,FBtr0290240 3 2 2 60 2L 12209585 12209605 GAATCTACAAGCTGATGACGG 59 12209626 12209645 TTACTTTGCCAGTCCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 2 3 3 170 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105116 12105188 CGTTGGTGGAGATACCCTC 59 NA Drosophila melanogaster 61 esc FBgn0000588 FBtr0080325 2 1 1 192 2L 11828898 11828978 CAAATACGACACCCACGTG 59 11828360 11828742 TACTTCATCGGGATCCGGA 59 NA Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0301761 2 1 2 80 2L 11076969 11076990 AGGCAATCTATCCCAATATTCC 57 11076845 11076929 TCAAATAGGCGCTGTAAGTG 58 NA Drosophila melanogaster 61 CG12517 FBgn0032311 FBtr0080144 3 1 1 70 2L 10870278 10870296 CATCTGTATCGAACGCTCG 58 10870328 10870348 CGTAAATCCCATTATCCGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17134 FBgn0032304 FBtr0080140 2 1 1 60 2L 10821373 10821396 TTATCTCCTTCTATCTCAAGCGAC 60 10821415 10821433 CCCAGGATCAGTTCTCCAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5188 FBgn0032247 FBtr0080024 3 1 1 89 2L 10428921 10428996 AAGTTAAGGGAGATACTGGCA 59 10429047 10429065 GTTTCTTGATCTCCTCGGG 58 NA Drosophila melanogaster 61 CG31715 FBgn0051715 FBtr0079996 1 1 1 84 2L 10341857 10341876 TCCAGTACACTATGCAGCAG 59 10341918 10342158 GTCCTTTCTATTTATGTCTGCTCC 59 NA Drosophila melanogaster 61 CG5037 FBgn0032222 FBtr0079992 1 1 1 80 2L 10332611 10332629 GACGTCACGAACTACTGGT 60 10332670 10332755 TTCATGAAACTTGTACGCAAGG 60 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 1 3 3 84 2L 10324301 10324388 ATATTCCAGGCTTTGCCAG 57 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 1 3 3 80 2L 10275742 10275762 TTTCCTAGCATATCGCAACTC 58 10275615 10275700 TGCTGATATAAGACGCCGA 58 NA Drosophila melanogaster 61 Pros35 FBgn0250843 FBtr0079948 1 1 1 87 2L 10222065 10222083 TGAAATCATCCGTCACGGA 59 10222133 10222210 AGTGATGTCATACTGACCGG 59 NA Drosophila melanogaster 61 CG5727 FBgn0032193 FBtr0079958 2 1 1 114 2L 10210156 10210232 TCAGGAAGTACACTCAGAGG 58 10210061 10210081 CTGTAACGATTCTTCCATCCT 57 NA Drosophila melanogaster 61 bib FBgn0000180 FBtr0079929 3 1 1 93 2L 9987718 9992264 TGCTTTATGGCGTAACTGTG 59 9992320 9992338 ACACCGAATCTTTCCCAGG 59 NA Drosophila melanogaster 61 CG13130 FBgn0040965 FBtr0079974 1 1 1 271 2L 9984507 9984525 AGTGGTGGATAAGCAACCC 59 9984014 9984032 ATTCTCATCGTCGCAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 3 1 1 162 2L 9937712 9937730 CGACAGTCAGTACTCCGAG 59 9937421 9937439 GGCTTCCTCTTCGATTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33723 FBgn0053723 FBtr0091721 1 1 1 96 2L 9440527 9440548 GCACTCTGAAATCGATAAATCG 58 9440389 9440470 AATCCAAAGTTGACCCGTG 58 NA Drosophila melanogaster 61 CG32985 FBgn0052985 FBtr0079757 3 1 1 89 2L 8963274 8963358 ATGGGCTACAATAAGGTCG 57 8963411 8963429 AATTTGAGTCTCTGCCGAC 58 NA Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 3 2 2 87 2L 8712295 8712397 TTTCGCAGCAAGAATACCT 57 8712226 8712244 TTATCCAATACGGGCAGAC 57 NA Drosophila melanogaster 61 Trs23 FBgn0260861 FBtr0079730 2 1 1 109 2L 8686484 8686561 GAATAAATGTGGGCCATGTCC 59 8686632 8686650 ATAGTTCTCCGGTGCATCC 59 NA Drosophila melanogaster 61 CG31897 FBgn0051897 FBtr0079673 2 1 1 60 2L 8443790 8443809 AAATGCGACTTAGGAAGCAC 59 8443832 8443850 GACTCGTCTTCAATCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31898 FBgn0051898 FBtr0079662 2 1 1 60 2L 8401055 8401075 AGCTATACCGAATCTTCTCCA 58 8401095 8401115 GATACTGCCTAGGACTTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 3 1 1 119 2L 8302035 8302053 ACGATAAACTGGAGGTGGC 59 8301878 8301955 TTCTGAAGAAACTCCTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079633 3 1 2 125 2L 8212779 8212798 CTCGTTTCATGGGCATTACG 59 8212599 8212617 GATCGGAGGCAGTCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 1 4 4 80 2L 8187028 8187046 CTCTGATGTTCCTCTGCGA 59 8187090 8187176 TTTCCGTTTGCTGAGTTCC 58 NA Drosophila melanogaster 61 CG34010 FBgn0054010 FBtr0100065 3 1 1 80 2L 8009951 8009970 TATGGAGAACAATCTCGCTG 57 8009836 8009911 CTACCATGAGGAGATCTTAGAC 57 NA Drosophila melanogaster 61 spz3 FBgn0031959 FBtr0079561 1 1 1 80 2L 7876158 7878222 GAAGGCCAAGAGAATGATAAGTC 59 7876100 7876121 GTTCTTCAAGTAAATCGGTCCC 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 2 4 4 80 2L 7649009 7649029 GTTGAGGACTTAGTCCTTTGC 59 7648881 7648972 CTTAATTGTACTGAAACAGGGACC 59 NA Drosophila melanogaster 61 Wnt6 FBgn0031902 FBtr0079434 1 1 1 246 2L 7343048 7351188 ATCTTAATGCGCGATTCCC 58 7351398 7351416 TGGGATGTTGATCCTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4496 FBgn0031894 FBtr0079419 3 1 1 145 2L 7186938 7186960 GGTCGAGGAGATTAGTAAAGAGG 59 7186750 7186834 AGGGAATGGTCTTTCACCTG 59 NA Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079430 3 1 2 146 2L 7027016 7027208 GTGTGGCTATCAAAGCAGG 58 7026888 7026908 CTGATACATGATTCCTTCGCA 58 NA InUTR Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0079353 2 1 2 81 2L 7013511 7013530 AATCTGTTCAAAGGATCCGT 57 7013571 7013662 GGAAGCATTCCATATAAACCTC 57 NA Drosophila melanogaster 61 CG9547 FBgn0031824 FBtr0079263 1 1 1 142 2L 6493999 6494017 AGAAGCAACGCTATTTGCC 59 6493757 6493777 GTTCAGGATGTATGTCTTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9140 FBgn0031771 FBtr0079216 3 1 1 88 2L 6061241 6061260 TATAAGCATGAGAGCTGTGG 57 6061109 6061192 TCACCCTTAACAAATCGAGTC 58 NA Drosophila melanogaster 61 CG9117 FBgn0031766 FBtr0079222 3 1 1 60 2L 6037476 6037494 CACGACCTCTACATGGACC 59 6037434 6037452 AATCTAGGGCCAGTTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bchs FBgn0043362 FBtr0079144 3 1 1 80 2L 5915305 5915323 CCATACAACATCTGCCCAC 59 5915365 5915454 ATTCAAGAAGCTGGAAACCTG 59 NA Drosophila melanogaster 61 bchs FBgn0043362 FBtr0079144 2 1 1 80 2L 5915356 5915445 TAAACATACCAGGTTTCCAGC 58 5915484 5915505 CGGTGATTAGGAAGTACAACTC 59 NA Drosophila melanogaster 61 CG11034 FBgn0031741 FBtr0079140 1 1 1 80 2L 5808614 5808632 ATGTCCACTACCAGCACTC 59 5808676 5808754 CGGTGTAGGTCTGTTCCTC 59 NA Drosophila melanogaster 61 CG14006 FBgn0031733 FBtr0079167 1 1 1 60 2L 5727923 5727943 CTCCTACTTGCTGATTCTCAC 58 5727883 5727901 CATAAGGCAGGTCATCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34011 FBgn0054011 FBtr0100066 3 1 1 107 2L 5717123 5717142 CCAACGGAACAACTTTCCTG 59 5717211 5717337 CCTTGGAATAATGTTCCGCC 59 NA Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079046 2 1 2 271 2L 4981395 4981415 GTGTGAATATCGTTGTTTCGC 58 4981091 4981110 GTAATATTTGGCCTCGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 1 1 1 61 2L 4968473 4968491 ACTGCCCGGATATTTGTCC 59 4968367 4968448 TTCAACTTCATCGACGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11927 FBgn0031638 FBtr0077386 1 1 1 60 2L 4848144 4848164 ACTATCCTCCGATGAATCGAC 59 4848185 4848204 CCAAAGCCCATGTTCATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0290244,FBtr0112925 3 3 3 60 2L 4379823 4379841 AGAGTACGATGCTCTGCTC 59 4379865 4379883 TTCGAACAGTGTGAAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16857 FBgn0028482 FBtr0077425 2 1 1 117 2L 4330948 4331034 GCTTTCAAACGCTACCCTC 59 4331115 4331133 GTGAGATTCCAGGGAGCTC 59 NA Drosophila melanogaster 61 CG3702 FBgn0031590 FBtr0077477 1 1 1 181 2L 4226865 4226883 GAAAGCAGGCGAAGATCAG 59 4226623 4226641 AGTAGATGATCAGGGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 lectin-24A FBgn0040104 FBtr0077539 2 1 1 60 2L 3717570 3717590 GAGTATGTTGCTATCCACCAG 58 3717530 3717551 CTTCGTTCGCTAATATTTCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16712 FBgn0031561 FBtr0077546 1 1 1 99 2L 3696460 3696540 TCAAGGATCCTATCTGTGGAC 58 3696381 3696401 TTGGTTTCGGGATGATAACTG 58 NA Drosophila melanogaster 61 CG33123 FBgn0053123 FBtr0077562 1 1 1 80 2L 3512831 3512911 ATCTGAAGAGTTTCTATGACGG 57 3512772 3512790 GCAGATCCTTCTTCACGTC 58 NA Drosophila melanogaster 61 CG8838 FBgn0031526 FBtr0077588 2 1 1 60 2L 3358228 3358246 GTTCCACTCAGTTGAAGCG 59 3358268 3358288 TCCTTAGCTGTAGATTCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3123 FBgn0031465 FBtr0077723 3 1 1 60 2L 2824615 2824637 GGGCTGTTTATCTACAGAAAGAG 59 2824577 2824596 GTCGCATGTAAATATCGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9961 FBgn0031451 FBtr0077740 2 1 1 151 2L 2744881 2744899 ACCAAAGAGCTCAAACTCG 58 2744694 2744769 GGGTACATTAAAGTCCACTCTC 58 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 1 3 4 147 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740641 2740659 TCTCCTTGGTGAACACCTC 59 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 3 1 1 61 2L 2287605 2287687 TTCAAAGTCACATCGAATGCC 59 2287564 2287582 CCTATCCTGCCGGTATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925,FBtr0077924 2 2 2 60 2L 1344826 1344847 CGCCACTTCATCTATTTCTACC 59 1344867 1344886 TTTAACCGCTCTTGAAGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4887 FBgn0031318 FBtr0077966 1 1 1 80 2L 1175452 1175471 TTGTCGACTCGATGAATGTG 58 1175514 1175587 TAATGGCCACAACTCTGTC 57 NA Drosophila melanogaster 61 CG15027 FBgn0030611 FBtr0073965 1 1 1 60 X 14979286 14979304 CCTGAAACTCGACCTAGTC 57 14979244 14979264 TTTCTTAGACTGCTCCTTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 3 1 1 184 X 14139326 14139663 TTTCTGGTGCTCTTCCTGG 59 14139875 14139894 TTCTTTAGCGTCACCTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073407 3 1 3 80 X 10766061 10771456 CCTTTGGAGACAATCTTCGTG 59 10766001 10766020 GCGAGAATTTAACCACCGAG 59 NA Drosophila melanogaster 61 CG11448 FBgn0024985 FBtr0070225 2 1 1 122 X 1288078 1288098 GCTCTTTCGGATACTCAAGTG 58 1288181 1288265 GATATTGAGGTGCTCCAGCT 59 NA Drosophila melanogaster 61 CG13377 FBgn0261446 FBtr0070106 3 1 1 137 X 152855 152937 CAGTGGCACAAACCATGTC 59 152736 152755 GACTTAGAAGCGCATATCGC 59 NA Drosophila melanogaster 61 CG15696 FBgn0038833 FBtr0083968 2 1 1 85 3R 16673246 16673266 GAAGATCTGGTTCCAGAATCG 58 16673313 16673331 TCGATGAGAAGGTGGAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6013 FBgn0038675 FBtr0083714 2 1 1 146 3R 14857611 14857629 ATCGAGGCGATAAACGAGG 59 14857737 14857820 GTCATTTACACTGAGCACCAC 59 NA Drosophila melanogaster 61 CG7379 FBgn0038546 FBtr0083529 1 1 1 94 3R 13622722 13622740 AAATGCCAATGCCAGTACG 59 13622585 13622667 CAAAGGAGATCTGATTGCAGAC 59 NA Drosophila melanogaster 61 CG6194 FBgn0038325 FBtr0083115 3 1 1 112 3R 11181222 11181240 CAGTCCCTTCTCCATCCAC 59 11181061 11181147 GCTCTAAGGCGTGTTTAAGC 59 NA Drosophila melanogaster 61 CG13250 FBgn0037013 FBtr0078211 3 1 1 88 3L 20527557 20527575 AAAGCCGAATCCTGAATGC 58 20527626 20528288 ATAGTTGACATTCGCCAGGA 59 NA Drosophila melanogaster 61 a10 FBgn0011293 FBtr0075290 2 1 1 102 3L 17016489 17016559 TGTTGAAGGAGATCCTGCC 59 17016405 17016423 TTGTCGATGAGATGACGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34427 FBgn0085456 FBtr0112728 2 1 1 90 3L 8798601 8798619 TAACTCCTGCCCAGATGTG 59 8798673 8798757 CAACTAATGTAGCGCTGGC 59 NA Drosophila melanogaster 61 Ppat-Dpck FBgn0035632 FBtr0077120 2 1 1 95 3L 5761227 5761312 CCATGACGAAGGGAAAGAC 58 5761150 5761169 GCGTATCATCTATGTCCACC 58 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 1 2 2 60 2R 17974258 17974276 CAAGAATGCCAATCCCGAG 59 17974054 17974234 GCTATTCAGCTCAAGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42365 FBgn0259711 FBtr0299964 1 1 1 60 2R 17554839 17554860 AAGTTCACAGATGTACAGTGGA 59 17554881 17554899 GTCCGACCATGTCAGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30058 FBgn0050058 FBtr0087767 2 1 1 60 2R 9098736 9098756 TGGTTGATTGGATCTTTGCAG 59 9098631 9098715 CCGTAATCCATGAAATCCGT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30487 FBgn0050487 FBtr0087802 1 1 1 60 2R 8825322 8825341 CTACCTGACCTGTCAATGTG 58 8825281 8825299 TTGAGTCGGAGCTTCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 3 4 4 131 2R 8228645 8228733 GATTGCATATCCGTCAAGGG 58 8228533 8228551 ATTTGTGAGGGCTATGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 3 2 2 116 2R 8186726 8186747 GTCTACTATATGGCTGGATGGA 58 8186569 8186649 CAGTCCGAATTTACTGCCA 57 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 3 4 4 80 2R 6041027 6041047 CTATATGTGGGAGAAGGACGT 58 6040909 6040985 GTGCAGAGTGTGATCACAC 58 NA Drosophila melanogaster 61 CG1888 FBgn0033421 FBtr0088547 1 1 1 82 2R 5433795 5434242 CTCACCTGCAAGATGAAGC 58 5433731 5433749 AAAGTTTCGCAGCAACTCG 59 NA Drosophila melanogaster 61 Ance-4 FBgn0033366 FBtr0088664 3 1 1 94 2R 4927988 4928070 TATTCCGTATGGCCATCCA 58 4927912 4927932 CATGTCCACAGTATCGTTGAG 58 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 CG10651 FBgn0032853 FBtr0081378 3 1 1 239 2L 20134271 20134339 AATCAGCAGGAACTGTCCA 59 20134050 20134071 GTGGCAAAGATTCTTGTATTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Sos FBgn0001965 FBtr0080541 1 1 1 80 2L 13815704 13815786 GAATTTATTCGCGAGGATTCG 58 13815827 13815846 GTCGAAGAGGAATACCTTGC 59 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 1 2 2 124 2L 7800630 7800721 TAGAGGCCCTTGGAAATGG 59 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4680 FBgn0036627 FBtr0075388 2 1 1 60 3L 16388488 16388508 ATCAATAGAAAGCTCACGCAC 59 16388530 16388548 TGATGCGCTCTATGTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940,FBtr0300779,FBtr0300780,FBtr0088939 3 4 5 167 2R 3565904 3566090 GGTCTAAACAGAATGGAACTCC 58 3565758 3565780 GCTCTGGTTTAATACTGTCATCG 59 NA Drosophila melanogaster 61 Eig71Ee FBgn0004592 FBtr0075585 3 1 1 80 3L 15649001 15649072 GGTCTGCTTAGTGGTAAGC 58 15648939 15648959 AACGCTTTCTCAATTACCTCC 58 NA Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 2 2 2 80 2L 2134954 2135044 CAACCTCAAGTTCTTCAACGA 58 2135085 2135104 AGGACACGTGAGATGTTCTC 59 NA Drosophila melanogaster 61 CG31873 FBgn0260750 FBtr0079986 2 1 1 82 2L 10270148 10270166 AAGAAATGCACGTTCGGAG 58 10270210 10270291 CGCATATGTTGTTCAATCTCG 58 NA Drosophila melanogaster 61 mRpL55 FBgn0038678 FBtr0083754 1 1 1 94 3R 14920297 14920373 GATTATCAAGCTTCCCTTGGA 57 14920223 14920241 TGATCTTGACCTTCTTGCG 57 NA Drosophila melanogaster 61 CG32500 FBgn0052500 FBtr0077374 3 1 1 103 X 21494388 21494406 GAGAGCTTGAAGTTCCTGC 58 21493236 21494321 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461,FBtr0070034 2 5 5 81 X 19905403 19905496 CATAGACAGATACATCGCTGTG 58 19905343 19905362 CAGTATCGTAAGGCAAACGC 59 NA Drosophila melanogaster 61 Nep3 FBgn0031081 FBtr0070000 1 1 1 93 X 19859149 19859240 GGATATTCCTGCAATCAATGGA 58 19859294 19859312 ACTGGTTCATCTGCTCCAG 59 NA Drosophila melanogaster 61 CG7101 FBgn0030963 FBtr0074639 3 1 1 193 X 18724999 18725017 GCCACGTTTCTTTACCGTC 59 18725174 18725271 TCATCAACCTGGCTGTCTG 59 NA Drosophila melanogaster 61 CG15048 FBgn0030935 FBtr0299567 1 1 1 60 X 18415059 18415203 CAGTGGGTTTCAAGGTTAAGAG 59 18415224 18415242 AAACGTTTGAGTACCTCCG 57 NA DesignRelaxed Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 1 2 2 80 X 16778987 16779005 AAGTCCCAAGAGATCCTGC 59 16779047 16779126 TTTATTGTCGTCGATGAGCAG 58 NA Drosophila melanogaster 61 CG9609 FBgn0030787 FBtr0074356 3 1 1 131 X 16680528 16680607 CACAGGGATTAAGAAGCACG 59 16680416 16680434 CACTTCACCGTCTTCTTGG 58 NA Drosophila melanogaster 61 CG1461 FBgn0030558 FBtr0073908 3 1 1 108 X 14155869 14155888 CAAGCTATCCCTTAACACGC 59 14155959 14157493 TGTGGGATCACCAATGGAC 59 NA Drosophila melanogaster 61 CG11581 FBgn0030540 FBtr0073892 3 1 1 60 X 14071568 14071586 TTCCCATCACAAGGAGGTG 59 14071610 14071628 CTCCTAGGAAACCATTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ste:CG33236 FBgn0053236 FBtr0300085 1 1 1 110 X 13954939 13954957 TCTGATACACAGCTGGACG 59 13954787 13954865 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ste:CG33244 FBgn0053244 FBtr0300093 3 1 1 110 X 13944786 13944804 TCTGATACACAGCTGGACG 59 13944634 13944712 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Tango2 FBgn0030503 FBtr0073807 2 1 1 80 X 13512427 13512640 CGAAATTGGATCTGCATCCC 59 13512683 13512701 CCGTTCTGGAAATCCTCCA 59 NA Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 3 2 2 80 X 12688609 12700942 CGACACCTTCAATAACATTCG 57 12688549 12688568 GTGAGGATTTCATTGTGACG 57 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 1 4 4 80 X 11055737 11055819 GTTGTGGTCACAAAGACGG 59 11055861 11055881 CTGGATGAAGTCAAAGTGCTC 59 NA Drosophila melanogaster 61 Gip FBgn0011770 FBtr0071472 2 1 1 60 X 10223383 10223401 CCGATAGCCTTAGAGCCAG 59 10223341 10223360 ACGGCGTACTTGTTAATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1468 FBgn0030157 FBtr0071388 1 1 1 112 X 9772628 9772646 ACGTCTACTACCGAAAGCG 59 9772722 9772863 TACATCTCCACACTCCGGA 59 NA Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071263 1 1 2 183 X 8867403 8867695 AGACCACGAGCATCAATCC 59 8867238 8867256 CAGAAATATTCGCCCACCG 59 NA Drosophila melanogaster 61 CG2004 FBgn0030060 FBtr0071281 1 1 1 119 X 8607724 8607742 TAAGAAGCCCTTCGTGGAG 59 8607430 8607642 TAGTCTTGACGTACAGGTGC 59 NA Drosophila melanogaster 61 CG15465 FBgn0029746 FBtr0070742 1 1 1 100 X 5059530 5068949 AACCAAGGATAAACCTCTAGAC 57 5069010 5069028 TTCCCTCATTTGGCTTCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 1 1 1 60 X 4275987 4277076 CCAAGAAGATCCAAGCATCC 58 4277098 4277117 TCCTCTAAGTCCTGCATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 ng3 FBgn0010295 FBtr0070539 2 1 1 60 X 3135855 3135875 GAGGACGTATCACTATACACG 57 3135815 3135836 CCTATAGATATGTCGTATCCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gt FBgn0001150 FBtr0070460 1 1 1 140 X 2322750 2322843 CTCAAGACTGATCGCAAGC 59 2322628 2322646 GTAGGCCGTGTACAGATCC 59 NA Drosophila melanogaster 61 l(1)G0144 FBgn0027296 FBtr0070414 3 1 1 165 X 2155438 2155506 ATTTCAAAGTGCCGATGCT 58 2155291 2155309 CATAAACTTCTCCGTGCGT 58 NA Drosophila melanogaster 61 Or2a FBgn0023523 FBtr0070397 1 1 1 134 X 2141285 2141303 ACTGGATAGAACAGCTGCC 59 2141401 2141489 TGAACCTCATGACCTGCTC 59 NA Drosophila melanogaster 61 msta FBgn0053548 FBtr0070421 1 1 2 126 X 2106928 2106950 GGAATGACTAAGCACTTCATCTG 59 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 1 1 1 104 X 1587254 1587272 TCACGTCTCGTGAGTTTCC 59 1587340 1587419 AATCGAGTGTTGTCCACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293 3 1 2 60 X 1368822 1370301 ATCCGGTGAACAGTTCCTC 59 1368780 1368800 GTAGAGGAGACAGGTCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070236 3 1 2 91 X 1240146 1242266 CATGAGTAACCTCACTGGCT 59 1240074 1240093 GAATGGTAAAGGTCAACGGC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 2 3 8 60 X 550406 550424 GGTCACTATAGCCGTTTCG 58 551147 551165 GATTGCAACTTGATGCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13376 FBgn0029518 FBtr0100649 1 1 1 79 X 160685 160703 GAGAGTGGGTCATCTGGTG 59 160624 160642 GAAGACCATCCACCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40621 FBgn0085757 FBtr0114207 2 1 1 150 U 9411854 9411875 TGAAATAAGACCTCTGTTCTGC 58 9411986 9412004 ATCTTTGGCAATGCTTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 1 2 2 64 4 1052526 1052544 TACGTGCTGCATCTAAAGC 58 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi18S-1377e FBgn0083047 FBtr0113594 3 1 1 61 3R 26032799 26032818 TTCTGGACGTTGTTCAAGTC 58 26032757 26032778 GTGATTCGTTGCATTACTTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2135 FBgn0039874 FBtr0085858 3 1 1 81 3R 27595668 27595687 ATAGGTTCGGAAAGCCTGTC 59 27595552 27595626 CAAATAAAGGCGGGAAGTGAG 59 NA Drosophila melanogaster 61 Npc2g FBgn0039800 FBtr0085723 3 1 1 63 3R 26570592 26570610 AAACAGACCTACACCACCC 59 26570547 26570565 GGATGGTGTACGGACTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 3 2 2 85 3R 25991688 25991764 ACATTGAAGTGGTGAGTCTC 57 25991622 25991640 GTAGGTATTCACGGCTTCG 58 NA Drosophila melanogaster 61 CG11873 FBgn0039633 FBtr0085365 1 1 1 80 3R 24929908 24929926 TCTGAAGCCGGATTACGTG 59 24929968 24930049 TCATGCATGCAATGATACCTG 59 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0301306,FBtr0085308 2 3 3 80 3R 24520581 24520599 CTTCTATCCCACCCTGCTG 59 24520639 24520720 CACAGTGATATGTATCTCAGCAC 59 NA Drosophila melanogaster 61 CG31063 FBgn0051063 FBtr0085127 3 1 1 115 3R 23053652 23053798 GGTCTACAGATCTGGAGTTGG 59 23053557 23053575 CCTCGATGATCTCGTCGTC 59 NA Drosophila melanogaster 61 CG31104 FBgn0051104 FBtr0084825 1 1 1 80 3R 21111788 21111863 GAAAGTCATCAATGAGCAACC 57 21111904 21111923 GGATCAGTATCGATTGTGGG 58 NA Drosophila melanogaster 61 CG34290 FBgn0085319 FBtr0299531 1 1 1 80 3R 20114895 20115023 CTTCCAACCATCCAACTTTCG 59 20114835 20114853 AAGCCATTGCCGAAATCAC 59 NA Drosophila melanogaster 61 Or94b FBgn0039034 FBtr0084342 3 1 1 185 3R 18815943 18815961 TGAGTTGACCTTTCATGCC 58 18816109 18816250 GCATTGTTGATGGTCTTCAC 57 NA Drosophila melanogaster 61 btn FBgn0014949 FBtr0084278 1 1 1 60 3R 18412236 18412257 GACTGCAGCTATGTATATGACC 58 18412197 18412220 CTAGTTTATTGTAATCCGCGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13407 FBgn0038931 FBtr0084181 2 1 1 86 3R 17929217 17929802 AATTATGCTCAAACGCAGC 57 17929852 17929870 GTGTCCTTGGTGGTAATGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rab1 FBgn0016700 FBtr0084104 2 1 1 82 3R 17093453 17094506 GTGAATCCGGAATACGATTATCTC 59 17093394 17093413 AATCGCAACAGAAGACAGGA 59 NA Drosophila melanogaster 61 Cortactin FBgn0025865 FBtr0084039 3 1 1 96 3R 16889216 16889234 AATTTGGAGTGCAGTCCGA 59 16889047 16889160 TTGGAGTAATCCTTCTGAGACTC 59 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 3 2 2 68 3R 16676606 16676624 GGACTAGAGACCATCGAGG 58 16676656 16676761 CAGTTGGTTCTTGACTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083837 2 1 2 94 3R 15883079 15883164 AAACATGACGCTCGAACAG 58 15883003 15883021 TCATGTCGCACTTCAAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14326 FBgn0038528 FBtr0083467 1 1 1 128 3R 13444863 13444946 GATTAGCTGTTCGCTGCTG 59 13445036 13445056 ATACGATTGTCTACTTGCCCA 59 NA Drosophila melanogaster 61 Cad89D FBgn0038439 FBtr0301702 3 1 1 81 3R 12316385 12316404 ACTCATCACCAATCTCACCA 58 12316239 12316345 GTTGATCTCTTCTATGACAGGTC 58 NA Drosophila melanogaster 61 CG31287 FBgn0051287 FBtr0083256 3 1 1 132 3R 12029662 12029740 CCGTAAATTTGGTAACCAAGCT 59 12029831 12029851 GCATGTTCGTTATAAAGCTGC 58 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253,FBtr0113241 2 2 2 81 3R 12005607 12005685 CACCATAGCCAAGTGTCTC 57 12005727 12005748 TCGAACTATTGTGGGATATTGC 58 NA Drosophila melanogaster 61 CG4338 FBgn0038313 FBtr0083066 2 1 1 60 3R 11102009 11102027 AGGTGCAGAATGAGTACCT 58 11102049 11102069 CGAAGATCCCTAGGCTTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 3 2 2 160 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098564 11098582 GGTTGTTGACAGACCTCCA 59 NA Drosophila melanogaster 61 CheA87a FBgn0038142 FBtr0082749 3 1 1 99 3R 9195609 9195683 CAATGATTGGACGGTTGTG 57 9195746 9195764 CATAAAGTCGCAAAGCTGC 58 NA Drosophila melanogaster 61 CG11686 FBgn0040551 FBtr0082735 3 1 1 97 3R 9086132 9087338 GTCTACTTGCTGAAATCGCTC 59 9087397 9087415 AGACGAACCAGAAGACCAG 59 NA InUTR Drosophila melanogaster 61 Su(fu) FBgn0005355 FBtr0082665 2 1 1 60 3R 8516445 8516463 ACATGGATCGCCAGATGAG 59 8516403 8516421 TCCTGTAGGTTTAGCAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 2 2 2 142 3R 8509987 8510006 CTATTTCAAGCGGTACCTGG 58 8509805 8509882 AAACGAGGCTCATTATCCG 57 NA Drosophila melanogaster 61 Hsp70Bc FBgn0013279 FBtr0082638 1 1 1 108 3R 8336661 8336679 AGAGCTACGTGTTCAACGT 59 8336749 8336769 CATCGAATAGTTTCGTTGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Bb FBgn0013278 FBtr0082637 3 1 1 72 3R 8333114 8333133 CATTGGGCACATTCGATCTG 59 8333165 8333186 TCGAAGGTTACTTCTATCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6830 FBgn0037934 FBtr0082439 3 1 1 110 3R 7508185 7508264 TTCTTGGAGGTCAGCACTG 59 7508093 7508113 GTCAATATTTAGCCAGTCCGG 58 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113220,FBtr0113218,FBtr0113219 3 3 3 87 3R 7032968 7033090 CTATCACAAACTCTCGGGC 58 7033141 7033159 CAATCAGGTACTTGCGGTG 58 NA Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 2 2 2 80 3R 6030866 6030884 CCTTCGCAAATCGGATACC 58 6030697 6030822 TCGGATGTAGCCTTGTAGG 58 NA Drosophila melanogaster 61 Rlb1 FBgn0014022 FBtr0082062 2 1 1 141 3R 5339111 5339188 GGTGATATCCAACAAGAAGGT 57 5339291 5339309 TGTGTTCTTGCGTAAACGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34301 FBgn0085330 FBtr0112497 3 1 1 116 3R 4599197 4599215 TACCTAAGCTCCATGGCAG 58 4599295 4599382 ATTTGGTTTCTGGGCTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11052 FBgn0040524 FBtr0081821 3 1 1 107 3R 3834643 3834664 GAATTTCGAACACAGAGTTCCA 59 3834503 3834575 GAAATGAAACGCCTTGCAC 58 NA Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081747 2 1 2 90 3R 3636381 3636463 CCTTGAATAATGAAGTTGCTGC 58 3636579 3636599 CACAGTACTTCAGACGAAGTG 58 NA InUTR Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081581,FBtr0081580 1 2 2 252 3R 3112027 3112045 CTTATCCACGGACGGACTC 59 3112397 3112415 ATCGCTGAGACATCCTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789,FBtr0301640 3 2 2 110 3R 1202652 1202670 ATATGTTGTTCCGTTCGCA 57 1202791 1202810 TATCCTTGGCGCTATAGGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 2 1 1 60 3R 758294 758454 CCAATATCAAGTTCAAGAGCCC 59 758475 758493 CTCTGATATCACCGCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 2 2 2 151 3R 359083 359101 AGAATGAGGCGTTCCTAGC 59 359277 359295 AAGGCTAAGGGAAGATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0078988 2 1 2 109 3R 31498 40876 TAAAGAAATCGTCCGCCAC 58 31407 31426 GCGCGATAAGGATATACAGC 58 NA InUTR Drosophila melanogaster 61 CG34260 FBgn0085289 FBtr0112454 1 1 1 80 3L 20708173 20708191 AAGTGCGACTGAAATTGCT 58 20708235 20710051 CTTGTGGTGCTATCTGCAC 58 NA Drosophila melanogaster 61 CG5577 FBgn0036759 FBtr0075162 1 1 1 174 3L 17833079 17833152 CTTATGATTGGTGACTGCCTC 58 17832925 17832943 AAATGTTCAGCAGATCGCC 58 NA Drosophila melanogaster 61 Ir75b FBgn0261402 FBtr0302293 3 1 1 81 3L 17813139 17813225 TTTGCACTGCTCACTTTCG 59 17813076 17813094 ATCCGAGTGTAGTGGTTGG 59 NA Drosophila melanogaster 61 Rpn12 FBgn0028693 FBtr0075308 1 1 1 60 3L 16576521 16576539 GGTCTGAATCTGCTGTACC 57 16576563 16576581 CCAGTTCCGTGTGAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13047 FBgn0036594 FBtr0289964 3 1 1 97 3L 16278468 16278489 CTCAAGTGCTTTAGACAAACCC 59 16278314 16278332 CTACAACTCCTGGTTTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32152 FBgn0052152 FBtr0075489 2 1 1 60 3L 16136268 16136289 CTTTCAATCTGTCATCCATCAC 57 16136229 16136247 GAGTACCAGGATTGTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 1 2 2 116 3L 16104976 16105110 TAGGACAGCTAATCGCACC 59 16104878 16104896 TAGGTGGCATTGGTTACCG 59 NA InUTR Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0301473,FBtr0112851,FBtr0301472 3 5 7 81 3L 16063960 16063979 CACAGACGGTTATTCAGAGG 58 16064021 16064219 GGATCCAGTTCATCCATATCG 58 NA Drosophila melanogaster 61 mex1 FBgn0004228 FBtr0075602 1 1 1 124 3L 15511424 15511442 GAATGCCTCAAATGTCCCG 59 15511039 15511059 GTGAAGTAGACAATCAAGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)70Da FBgn0013563 FBtr0075777 3 1 1 80 3L 14067609 14067686 TATCGCATAAGCAAGACCCA 59 14067729 14067747 CAGGCAGTACGAGTTTGTG 58 NA Drosophila melanogaster 61 CG13484 FBgn0036406 FBtr0075780 3 1 1 67 3L 14045953 14045972 CAAACGTTGGCTTCTACGAG 59 14045905 14045928 GGATTTGTTCTGGTAGAAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075864 2 1 2 192 3L 13380693 13380778 AGTGACTTTGAGGAGTCCC 58 13380519 13380537 AGAAGAACACCACCAAGCT 59 NA Drosophila melanogaster 61 CG10748 FBgn0036327 FBtr0075900 3 1 1 60 3L 12964655 12964673 CGCAACTTTCGTGAACTCC 59 12964613 12964632 GCACTCGATTAGACCATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ent3 FBgn0036319 FBtr0075935 1 1 1 114 3L 12848010 12848032 TCTACATACTCTTCAGCTACCTG 59 12848106 12848298 TCAATCTCCTGCTCATCCG 59 NA Drosophila melanogaster 61 Pcaf FBgn0020388 FBtr0075969 3 1 1 81 3L 12515798 12515817 GAAACAAGAGGACCAGTGTG 58 12515682 12515755 AAATTCTCACTGCTTGGACG 58 NA Drosophila melanogaster 61 CG32054 FBgn0052054 FBtr0076314 1 1 1 80 3L 10087064 10087154 CCAAGAAGTATGTCTTGATCTTCAG 59 10087008 10087028 CGCCACTATTCTTTGTACTGG 59 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 2 3 3 64 3L 9127983 9128098 ACAATTATTGGGTTGGCAGC 59 9128125 9128143 CACCACAATGCTAACGTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 3 1 1 68 3L 6156737 6156755 TTGGTTCTCCTTATGGGCA 58 6156785 6156933 ACACATGTAGCGACTATTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10590 FBgn0035622 FBtr0077127 2 1 1 92 3L 5596719 5596798 ACAATCACAAGTACAATGACCG 59 5596648 5596666 AGAAGTACGCGTACGTCTC 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 1 4 4 80 3L 4580096 4580114 CTGCATTGACTCCTATGCC 58 4580156 4586596 CTATCCTTTGTGAGAACCTCC 57 NA Drosophila melanogaster 61 CG10866 FBgn0035475 FBtr0073173 2 1 1 88 3L 3937385 3937462 TTATTTGGAGGATGCCACC 57 3937315 3937333 TGCACATGTAGAACAGCAG 58 NA Drosophila melanogaster 61 CG14962 FBgn0035407 FBtr0073112 3 1 1 89 3L 3166201 3166222 TACAGAGCAACCTTCTTATCGA 59 3166043 3166151 AAACGCTGCATACGTACAC 59 NA InUTR Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072995,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072992,FBtr0072996,FBtr0073001,FBtr0113131 2 15 15 80 3L 3087426 3087509 AATATGCATCAGCAGGACG 58 3087553 3087571 TTGCACGGATTGAAGACAG 58 NA Drosophila melanogaster 61 Sk2 FBgn0052484 FBtr0072984 3 1 1 127 3L 3048049 3048067 TAGTCAATGGACTGCTGCA 59 3048155 3048655 GTATGGTTCGTTGTAACAATGG 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 5 5 121 3L 2629234 2629252 GAGTGCAGTCCGTCTACTG 59 2611994 2629150 ACGCAAATCTAGCGTTTGTG 59 NA Drosophila melanogaster 61 CG1139 FBgn0035300 FBtr0072845 2 1 1 100 3L 1973624 1973642 GCTTGTATGTTCTGCTCGG 59 1973706 1973781 CTGAGCGGGTATTTCAGAC 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072643 2 1 2 60 3L 1099133 1099151 GACTTGGAGATCAAGCCAG 57 1079663 1099111 AGGAACTTACCCTTTCTTCCT 58 NA DesignRelaxed Drosophila melanogaster 61 5SrRNA:CR33414 FBgn0053414 FBtr0086406 1 1 1 60 2R 15631228 15631246 ATACATCGGTTCTCGTCCG 59 15631186 15631204 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30421 FBgn0050421 FBtr0072369 2 1 1 81 2R 20632351 20638830 GTTAATGTCGTGTCGGAGGA 59 20638874 20638892 AGCATCCGGTGTAGAATGG 59 NA Drosophila melanogaster 61 nvy FBgn0005636 FBtr0072267 1 1 1 90 2R 20176862 20176973 CAGTGACACAGGTGAAACG 59 20177027 20177045 TCCTGCGTCATGATCTCAG 59 NA Drosophila melanogaster 61 CG13565 FBgn0034935 FBtr0072209 3 1 1 82 2R 19834850 19835146 ATAGTGAGATTGATTTCGGCTG 58 19834789 19834809 GAGTACTTCGTCTTGAACTCC 58 NA Drosophila melanogaster 61 Nap1 FBgn0015268 FBtr0072219 3 1 1 81 2R 19794235 19794738 AACCGAAGTGAGATCAGCA 59 19794172 19794190 CGATTTCGTTGCAGGACTC 59 NA InUTR Drosophila melanogaster 61 CG13560 FBgn0034899 FBtr0072088 2 1 1 67 2R 19635402 19635420 GTACGGGATCAACCACCTC 59 19635451 19635469 AGGAGACGGATTAGTCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 2 4 4 60 2R 19487892 19487970 TCCTGCTAAACGTCAATTCAC 59 19487852 19487870 GTTAAGTTCCTCGCCTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 2 3 3 80 2R 19279311 19279329 TCGTCATTCCCAAGGACTC 59 19279182 19279267 ATTTGTTGATGGACACCGG 58 NA Drosophila melanogaster 61 otp FBgn0015524 FBtr0290289 3 1 2 97 2R 16773851 16773870 CTGAACAGTGGCCTAAACTC 58 16772861 16773791 ATCATGGAGTCGCCTAGAG 58 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631 2 1 2 98 2R 14712064 14712216 GTTCAACGACGACATGCTG 59 14711984 14712002 CCGGTGTAGGTGTAATCGA 58 NA Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 1 3 3 80 2R 14546264 14546282 TTAGCTTGGTGTCCAACAG 57 14546143 14546220 TCGGAATGAGTTTGCAGTC 58 NA Nonspecific Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711,FBtr0086712 2 2 2 82 2R 14511285 14511434 CATGGATCCAGCCAAACTC 58 14511221 14511240 GATTGAGATCGGGAACAAGG 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 2 5 5 81 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042923 14042942 TTAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 3 1 1 83 2R 13613262 13613280 GAAAGTGCAAACTGGTTCG 57 13613137 13613215 AAATTGCACGACACTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603,FBtr0300604,FBtr0086949 1 3 8 81 2R 13408423 13409344 CGCTTCAGGTCCTAAACTC 58 13408360 13408378 AACACAGTATTCAACGGCA 57 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 3 3 3 80 2R 12508881 12508900 CTACTGATACGACCGAAACG 58 12508942 12509025 CAGTGATTCGAAGAGTGGTG 58 NA Drosophila melanogaster 61 Poxn FBgn0003130 FBtr0087311 1 1 1 188 2R 11717950 11718543 GCATACAGGTCAAGCTGGA 59 11717711 11717729 CCCGTCTCATAGAAGCGAG 59 NA Drosophila melanogaster 61 CG8180 FBgn0034021 FBtr0087359 1 1 1 81 2R 11361243 11361401 CTTGAAGATCGGTGATGAGC 58 11361181 11361199 GTTGCTGTACGGACAATGG 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087610,FBtr0114493 1 2 5 170 2R 9847610 9847837 GTAACACTGCTGAGCTCTC 58 9847458 9847476 TCTGGGTCATGTAGACCAG 58 NA InUTR Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114494 3 2 5 119 2R 9847775 9847796 ATTGGGAATTGACGATTCACTG 59 9847559 9847577 CTGGAACTACCCAGTCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451 3 1 3 65 2R 9842101 9842120 GCAGTGAAGTATTCACACCA 58 9842148 9842438 GCAGGAAGAGGAATTCCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30053 FBgn0050053 FBtr0087873 1 1 1 87 2R 8577060 8577078 CAAAGTGTCCAAGAGCAGG 58 8576935 8577011 CTATTCCCTCCAAACCTTCAC 58 NA Drosophila melanogaster 61 spt4 FBgn0028683 FBtr0087840 1 1 1 80 2R 8521466 8521552 AAAGATTGTCCCGCTTTACTC 58 8521591 8521612 TCATGTCACGTAAGGTAGACTG 59 NA Drosophila melanogaster 61 CG8569 FBgn0033752 FBtr0087940 2 1 1 109 2R 8406758 8406776 TTCAGCCATCCGTATTTGG 57 8406849 8406932 ATAAACTGGCTGCTTCTGC 58 NA Drosophila melanogaster 61 CG8888 FBgn0033679 FBtr0088022 1 1 1 83 2R 7964796 7966810 ATAACAATATGCGCCGTGC 59 7964731 7964749 GAATCTCGTGCGACTTCTG 58 NA Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 3 2 2 153 2R 7943884 7949026 CCTTCAAGATCAAGGACATCAC 59 7949140 7949158 TACTCCTCATCGTCGACCT 59 NA Drosophila melanogaster 61 CG8964 FBgn0033674 FBtr0088027 3 1 1 130 2R 7911659 7911765 ATGGATGAGGGAAACCCAG 59 7911547 7911565 TTTGACCCTGGCTATTGGA 58 NA Drosophila melanogaster 61 thetaTry FBgn0011555 FBtr0088162 3 1 1 60 2R 7229704 7229724 AGGTCTATGTCAACATTGTGG 58 7229664 7229684 TCTCCGTACTTGTACTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Eg FBgn0086519 FBtr0088183 1 1 1 156 2R 7165821 7165908 AAGTTCTTCATTGCTTTCGC 57 7165684 7165702 CGTTAAGGTCACCCTTCTG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 CG12909 FBgn0033507 FBtr0088348 3 1 1 61 2R 6197982 6198002 GAGTTGGATGGACATCATTCG 59 6198022 6198043 CGGCTGGAGTTAAATTGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088410 1 1 2 178 2R 5984068 5984086 AATGGATCCGTCTGGACAG 59 5984636 5984758 ATGACGTCAATCAGTGGGT 59 NA InUTR Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243,FBtr0088529 3 2 2 60 2R 5477789 5477809 CCTTTATGGTTAGCAGTCCAG 58 5477831 5477849 CATTTGACCGTTTCCAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8235 FBgn0033351 FBtr0088676 2 1 1 64 2R 4815383 4815458 CATTGAAGCCGAGATTTCCG 59 4815338 4815356 TGATCAGCTCCTGCTTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8701 FBgn0033287 FBtr0088740 3 1 1 63 2R 4259242 4259261 CTGCCCTAGAATCAAGATGC 58 4259287 4259305 TCTAACGACGTGGCAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1845 FBgn0033155 FBtr0089021 3 1 1 62 2R 3164277 3164295 CTTTGGATACCGGAAGTGC 58 3164167 3164254 CTCAATTGAATCTATTGGCTCC 57 NA DesignRelaxed Drosophila melanogaster 61 His2A:CG33823 FBgn0053823 FBtr0091827 1 1 1 60 2L 21468376 21468398 CTAGAATTATTCCGCGTCATCTG 59 21468417 21468436 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33896 FBgn0053896 FBtr0091900 1 1 1 60 2L 21467855 21467874 AGAAGAACATCACCAAGACC 57 21467814 21467832 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17472 FBgn0032868 FBtr0081382 1 1 1 60 2L 20634560 20634580 GCGGAATGAAGATAATAGCAC 57 20634601 20634691 TTACTACTAAGGGCAAAGCC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG12508 FBgn0040995 FBtr0081305 1 1 1 60 2L 19969884 19969902 GACCTCGACTTCGATCTCC 59 19969842 19969860 CTTGGGAAAGCCATGTCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 amd FBgn0000075 FBtr0081153 1 1 2 109 2L 19110341 19110420 TACGTGAGAGGGATGTCCT 59 19110493 19110511 CAGATCCTTGAGGACCTCG 59 NA Drosophila melanogaster 61 CG31784 FBgn0051784 FBtr0302499 3 1 1 82 2L 17124157 17124175 TGTTCAGCATCGTTTGCAG 59 17124031 17124051 TATATTCAAGGACACGGAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 2 4 4 85 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825419 CAATTATTTCCATGGCTAGACCC 59 NA Drosophila melanogaster 61 CG5861 FBgn0015338 FBtr0080850 2 1 1 102 2L 16306613 16306703 CTTCTTTGCGGAGATTCTTCG 59 16306531 16306549 TATGAGCTTTGAGTGGCCC 59 NA Drosophila melanogaster 61 CG13245 FBgn0045827 FBtr0080802 3 1 1 91 2L 16004995 16005014 CAACCTTAAACGTTCACCGG 59 16005140 16005158 GATTATTGCAGGCCAGGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18478 FBgn0028517 FBtr0080757 2 1 1 67 2L 15670315 15670433 TTGAAGAGCTAAAGTGCGG 58 15670461 15670482 CCCTTCGGTAACATTAAATTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0080467 3 1 2 82 2L 13369308 13369391 CAAAGATTAAAGTGAGCAACCC 58 13369432 13369452 AATTGCTCGAATCGTGTATGG 59 NA InUTR Drosophila melanogaster 61 CG14931 FBgn0032374 FBtr0300370 3 1 1 89 2L 11788695 11788714 CCGAATTAGCAAGTGTCGTG 59 11788766 11788849 AATCAGACTCGCTCTCGTG 59 NA Drosophila melanogaster 61 YL-1 FBgn0032321 FBtr0080146 3 1 1 81 2L 10970811 10970829 CGTTTCGGATCAGGAAGAG 58 10970872 10970968 AGGCTTGGTTTCCTTATAAGC 58 NA Drosophila melanogaster 61 CG13136 FBgn0032186 FBtr0079965 2 1 1 60 2L 10137019 10137037 GTGTGGATAATCGATGCGT 58 10136977 10136995 CCACAATGGACACATTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31636 FBgn0051636 FBtr0079324 2 1 1 93 2L 6657368 6657446 TCGTAAGAATGGGAGTACTCC 58 6657295 6657313 CTCGTATCGTAGGAACCGG 59 NA Drosophila melanogaster 61 CG34345 FBgn0085374 FBtr0112553 3 1 1 80 2L 6624752 6624834 GACATTCTTGTTCTACATGACCG 60 6624872 6624892 TTTGGCTGAATAGCAAGTTGG 60 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 3 2 2 195 2L 6008257 6008275 CCACACCTGTATTGCTCCT 59 6008022 6008098 GACATGGAACTCGGTTCGA 59 NA Drosophila melanogaster 61 CG31918 FBgn0031678 FBtr0079028 3 1 1 60 2L 5057097 5057115 TATTTGATGCCATACGCCA 57 5057055 5057073 GGCAGCTTAAGAACGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14043 FBgn0031659 FBtr0078995 1 1 1 60 2L 4972072 4972092 CTACATCTACACAGAGGAGCA 59 4972112 4972132 TAGTTCCAGACAACGATTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 2 2 2 80 2L 3865420 3865503 CGCATCATCAAGAACACCA 58 3865546 3865565 CGATCGAATGGTCCTAAACC 58 NA Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 3 2 2 84 2L 3473693 3473776 AACTACAATTGGCTGCCTC 58 3473822 3473842 GCGAAATAGTATCCACCATGG 59 NA Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 1 2 2 80 2L 1161973 1161991 CCATCAATGGGATCTTCGG 58 1161854 1161929 TGTACTTCTCCTCTTGCGT 58 NA Drosophila melanogaster 61 dbe FBgn0020305 FBtr0078030 2 1 1 60 2L 869231 869249 TCCTTACAAGGGCCTTCAG 59 869189 869207 GTGCACATTGTTCATGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BBS8 FBgn0031255 FBtr0078058 3 1 1 80 2L 424699 424718 TCAATGTGGAATCTTTGGCC 59 424761 424839 TCCGGTAGTACATCAACGC 60 NA Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 1 2 2 68 2L 8088 8108 GTCAAGAAAGTCAGTGAAACC 57 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 2 6 6 80 2L 14976 14996 ATTATGTGCCTTATGGACCTG 57 14858 14937 CAATTACATCGTTGGATCTTCG 58 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 1 5 5 109 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0078002,FBtr0078001 1 2 3 86 2L 759541 759691 GGGCAAGAAACGATATTATCGA 58 759738 759756 GATCATCGACCACGAATCG 58 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 2 3 3 60 2L 823530 823553 GATATGAAGGTCTACATGATGGAG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 2 4 4 80 2L 872014 872035 AATCGCCTCAAGATAAACTCAG 58 872075 872221 TAGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 1 2 2 87 2L 952065 952083 AAGGAGACGGCTATTACGG 59 952134 952265 GTAGACGTTGCTTGTCCAC 58 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 1 4 4 85 2L 1085132 1085214 CCAACTCATCAATGGTGCC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 2 2 2 80 2L 1359514 1359533 AGTCGACGGATTTCATAGAG 57 1359404 1359472 TTACAGTACCAGTTTGGGTG 57 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926 2 1 2 98 2L 1368392 1368410 GGACACCGAGATTTACCTG 57 1368472 1368540 GTTGGATCCGGATTGAACC 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 1 3 6 123 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500037 1500124 ATATGTTGACTTGAGTGGCG 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 3 3 6 125 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500035 1500123 GGATATGTTGACTTGAGTGGC 59 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068 2 1 3 126 2L 2010196 2010215 CTATTGATTTGGTCCTCGCA 58 2010303 2026776 AGGAGATTCCTTTATCGCGA 58 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077726 3 1 4 80 2L 2793377 2793397 AGATGGAAAGGGTAAGAAGGG 59 2793260 2793335 TCAGGCTGAACTTTCTCCT 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 1 7 7 80 2L 2963125 2963239 CTGTTAAGGTGATTCGTGATCTG 59 2963278 2963297 CAGCCTCTTCGTAATTCGTC 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 3 5 6 82 2L 3071761 3080665 TTCATGTCCAAAGAGCTGG 57 3071697 3071715 GTCTTCTCTAGCGTTCCCT 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 3 1 1 168 2L 3578863 3578881 GAGGCAGGATCATCTGAGG 59 3578567 3578585 GTTGAAGGAGCGATTGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079038 3 1 11 137 2L 4994987 5008191 ATACGGATTGGTGGAATCC 57 4994868 4994886 GTTAGGAGCGACAAGTAGG 57 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004,FBtr0079005 2 2 2 60 2L 5039691 5039709 TCTACAAGGATGGCAAGTG 57 5039733 5039819 GGCTCATCAATCTGATCCA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 1 3 3 80 2L 5356384 5356632 CGGACAATCAAGATCGCAC 59 5356676 5356694 ACTTGTCGGCCAGTATCTC 59 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 2 4 4 93 2L 5973670 5976624 GAAGACAACACAAGCCGTG 59 5973595 5973619 CAGATAATCTCCAAGTTTCTCTACC 59 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218 3 1 4 133 2L 6047908 6047926 ATCTCTAGCAGCACAGCAC 59 6047674 6047692 TATGTGCTCCGATGTCCAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 2 3 6 81 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688666 6688684 CGAGGATCTGTCTAGGCAG 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 1 5 5 81 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 1 5 5 131 2L 6924280 6924300 GGTTATCATGTACGACCAGGA 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 2 3 3 125 2L 7032325 7032343 CCAGCTAGTGATAGAGCCC 59 7032085 7032104 CAGGAACTTGTAGTCCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 3 2 2 80 2L 7380995 7381074 TTGATTATGGATCGCGTTTCG 59 7381112 7381134 GTAATGAGCCACGGATATTTCAG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 3 3 6 85 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284053 8284131 GAACGGATAACCATCCGGT 59 NA Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 2 2 2 168 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332449 8332468 GAAATTGATCACCGTCTTGC 57 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079687 1 2 4 91 2L 8537386 8537404 GAATCCATTCGCCGAATCG 59 8537459 8540471 ATCAGTGGCATCTCCTTCC 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 3 4 4 120 2L 8536961 8536979 CATACAACCGACATCGGTG 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 3 2 2 80 2L 8940304 8940322 AGACGATTCAGGTCAAGCA 59 8940185 8940260 CCAGATAGTAGGCCCAGTC 58 NA Nonspecific Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 2 4 4 80 2L 9517894 9518002 AGCTCATAAGGTTAACAGCAC 58 9518041 9518062 TGTCATTCTCCATATCAGTCAG 57 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079843 3 1 2 174 2L 9643294 9643402 ATATAAAGTGATGCAGACCCTG 58 9643531 9643555 GGTCTCTAGAAGATTGATAATCTGC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 2 3 3 80 2L 10465371 10465951 CCAATATAGTTCACAGACACGA 58 10465312 10465332 CAACTACAATGTCCTCATCCA 57 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 10 10 150 2L 10826067 10831329 GATTCTTTCCTGCTCGAAGG 58 10825824 10825958 GGTAGATGATGTACGCTTTATCG 59 NA InUTR Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 3 1 1 169 2L 11016283 11016301 GAGCAGTCAGGAGAACCAG 59 11016499 11016518 TTCTTCCAAAGTCCCTCGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0080196 3 1 2 95 2L 11092642 11092661 GGACCCTATTTGTTCCTTCG 58 11092716 11092792 GTGACCAGTTCTATTTCATTGG 57 NA Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 1 2 2 83 2L 12093842 12093860 AAGCATCCCGAAATTGCAC 59 12093907 12094008 AATCCTGGAGAGCACTGTC 59 NA InUTR Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343,FBtr0080342 3 2 2 222 2L 12173089 12173108 ATATCCTATTCGCCATCGTG 57 12173376 12173394 GAAAGTAGCGCCATTCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642,FBtr0112643 1 2 2 190 2L 12623012 12625465 ATCGAATGCTTCCGATTGC 59 12625619 12625637 ACTGATGGTGGTTCAGGTG 59 NA Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 1 1 1 119 2L 13073311 13073329 GTCTGCTATCGTGCAACAC 59 13071807 13071825 AACTACGTCCATCCACGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080441,FBtr0080439 3 3 4 81 2L 13204263 13208120 GCGATGGATGCTATGATATGG 58 13208160 13208181 ACAATTACCTTATCGCCAAGAG 58 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 2 5 5 80 2L 13634168 13634249 GTTCACCTACAGAGATTTCACTG 59 13634289 13634307 CAAATTCCACCAGAGGCTC 58 NA Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080576 1 1 2 96 2L 13779657 13779675 AACAATACAACCTGCACCA 57 13776143 13777775 ATGAGGCTAGTTTGCTGAC 57 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 3 1 2 104 2L 13783029 13783052 GGGAGGTAAACTTTAGGTATATCG 58 13782897 13782915 TCTTGGTGCGGTAGTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627 1 1 3 124 2L 14357270 14357357 ATGTCCCAACATGACTGCA 59 14357444 14357528 TGGCCATGAATTTCTTCTCG 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 2 2 3 80 2L 14846481 14846797 TACTTTGTTAAGGAAGTGCTGC 59 14846422 14846440 TCCAATGACCAACTCCCAG 59 NA Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 1 1 1 60 2L 14871561 14871579 TCTATCACTACAAGCCGGA 57 14871453 14871473 GCCCAATAAACCTTTATCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703 1 1 2 84 2L 15093614 15093632 GATCCCTGAGATACCACCG 59 15093680 15094693 GCTATTTCCGAGTTCGCTC 58 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 3 4 5 161 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737811 15737831 ATCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080906 3 1 16 88 2L 16777366 16777384 GGTGTGCTTGAAGGTATCC 58 16777436 16777645 GCCAGAATCATGTAACGCA 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 2 2 2 80 2L 18010979 18010999 AATGAGTATTACGGAGACTCG 57 18010851 18010937 GCTGGAATACTCCAACAGG 57 NA Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 3 2 2 127 2L 19047035 19047157 ATTCCACTGAAGACGAGGC 59 19047247 19047266 TGAAAGTATTGCCCGATCCA 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 3 2 3 125 2L 19385700 19386089 GAGATTTCCAACAAAGTTTGGG 58 19385290 19385308 TACCGCTATAACCTCCACC 58 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 1 2 4 80 2L 19387759 19387869 AACGATATTCGCATCCAGC 58 19387697 19387715 TCCTCTGTACCGATTCTGG 58 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 1 2 2 60 2L 19418373 19418391 TCGGCTACGACAAGTACAC 59 19418477 19418495 TCAACGGTCAAGTTGTACG 58 NA DesignNoJunction Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 2 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569183 GGGTTTCTCTACATAGGTATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 3 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569184 GGGTTTCTCTACATAGGTATGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 3 2 2 91 2L 20930076 20930153 CCTTAGAAGAGGTGCACCTC 59 20930004 20930023 TACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 2 7 7 80 2L 21119887 21119906 ATACACGTGAACGAGATCCT 58 21119949 21120074 GTGGTACATCACAACCGTG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 3 13 13 81 2L 21289505 21289525 TTTATACAGCCCAGTCTTGGT 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0081526 3 1 13 98 2L 21287939 21287959 TCATCAAATTCACCTTCCGTC 58 21287714 21287879 CAAACTCAAGGGCGATGTG 59 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 2 2 3 96 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648242 20648434 GGGTTTCAGCATTATAAGTGTG 57 NA Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 1 2 2 80 2R 345593 345669 CCCACACCTATGAATACTCCA 59 345533 345551 ATAAGTCAACCGGGACCTC 58 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 2 5 5 80 2R 580449 580530 AATTAGAGGTTATGCGAGTCGT 59 580390 580412 GTAGTGCGAAGAAGTGTATACAG 59 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 1 4 4 81 2R 706847 706865 AACCCGTCTGTTGGAAGAG 59 706726 706805 AGAGGTAATCTTCTTCCCACAC 59 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 1 3 3 102 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 3 2 5 114 2R 1492010 1492097 CAAAGTTTGAGTACGCATTCTG 58 1491861 1491879 TAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 3 2 2 100 2R 1566991 1567071 CGTAAATGGTCTTCCGGTG 58 1566909 1566927 TCTTGACTCCAGTCAGCTG 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 1 4 4 82 2R 1925630 1925649 AGATGGGCTTCAAACTCTCC 59 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131 2 1 5 118 2R 2641935 2642220 TGAAGCCCATATCCAAGGTG 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 3 1 1 165 2R 2895354 2895372 CTCATCTTCGTGGTGTCCT 59 2895564 2895582 GATTGGACATATCGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 3 3 3 82 2R 2921961 2922139 TTATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 2 3 3 162 2R 3106662 3107969 CATGATAACGAGGTTCGTTACTG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 2 3 59 81 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241374 3241394 CATGGACTCCACAATATTGGG 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 2 5 8 108 2R 3355322 3356623 ACTATGCCGTTGATGTGCT 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911,FBtr0088912 3 2 3 80 2R 3481270 3481403 ATATCTCCTTCTTGCAACCCA 59 3481442 3481463 GGACGAATACTGTTCTCAACTC 58 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300780 3 1 5 127 2R 3565600 3565620 AATCAGCAACGAAATCCTCAG 59 3565230 3565514 CTAATGTCTCCTCGAATAGCGT 59 NA Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 3 2 2 82 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720262 3720280 GTCCGGATCACTCCTATGG 59 NA Nonspecific Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 3 2 3 138 2R 4619311 4619677 ATTCAATATGCAGTCCGGG 57 4619191 4619209 CAGCGGCTTTAGTACACTG 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 2 5 5 80 2R 5066160 5066178 GTTGGTTTGAGACATCCGC 59 5066037 5066122 CGTTGATGAGTATCTTATTCACGAG 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 1 3 3 101 2R 5475200 5475289 CAAGGGTATCAGGTCCACTC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299930 1 1 2 84 2R 5605398 5606568 CTCCTCCAGAGTTTGTTCG 57 5605332 5605353 CGGAAGATCTTCAATATCTCCC 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 1 4 4 101 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880558 5880576 GTAAAGATCATCGTCGCCG 58 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 3 2 10 82 2R 5994292 5994979 TAGCTAAACAGGCGTTCGA 59 5995024 5995043 CATGATGAGTGTCGAGTCCT 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088421 1 1 3 104 2R 6000580 6000599 ACTACATCGCATCATCGAGG 59 6000665 6001639 GCTAAGTAACCGCAATGACG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 2 10 17 82 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182824 6183261 CGATTGTTCTAGATTCCCGT 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089365 2 1 26 116 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6375918 6419549 ATCCACGGTAATCACTTGGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089356 2 1 26 183 2R 6414473 6414582 TTCATCGTGCAGAAATGCC 59 6414308 6414326 CATGTGACGCCTCAAAGTG 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 2 2 4 81 2R 6731012 6735971 CCATTGTACTCAAGGCGGA 59 6730949 6730967 AGACCCAAATCCTCGTCAG 59 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 3 2 3 81 2R 6773587 6773606 CTATTGAGTCCGGAATGCAC 58 6773647 6773726 CATTGGGATAACACTTAGAGGG 58 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 1 2 2 92 2R 7344227 7344316 TGTTTACCTACCGACTCGAC 59 7344371 7344389 TTAGCATCCGAACAAGCAC 58 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 2 4 4 80 2R 7531791 7531810 CATTAATTTGCACTCGTGCT 57 7531671 7531750 ATCTCCATGAGATTTGGACAG 57 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 2 3 3 123 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855268 7855344 CACTTGGAATGAAGGATCCG 58 NA Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 1 2 2 90 2R 7943884 7949026 CCTTCAAGATCAAGGACATCAC 59 7949077 7949095 AATTTCAGCGACACCTTCG 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089668 2 2 4 91 2R 8191120 8191138 ATTGTTGCGAGCCAATCAG 59 8190980 8191071 GCCCTAATGTTATTGAATATAGGGC 59 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 2 4 4 102 2R 8229049 8229067 AGTGTTCCACCGATCACAG 59 8228907 8228926 ATGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 1 3 6 83 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548627 8548645 GACAGGATGACGATCAGCA 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 2 2 2 90 2R 9040862 9040941 CAAGATAAAGACCAACATGGAC 57 9040793 9040811 TAATACAGCCAGCTTTGCC 58 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 2 3 3 80 2R 9407577 9407595 GTCCATGCAACAAGGATGG 59 9407451 9407536 GGTAATAGGTCTCGTTCTCCTC 59 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 3 2 3 82 2R 9406088 9406109 ACTCTGCTTTATGTATGCTCCA 59 9405629 9406051 GTCCATAGATCAAAGACTTCTTCTC 59 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 3 5 5 150 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426351 9426485 GCGGCCATCTTTAAAGGTC 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 2 5 5 82 2R 9436513 9436532 TTATGGTGACTCCCATCTGC 59 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 3 2 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179875 10181607 TCTGCAGAATATAGACCTCCTC 58 NA Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 3 2 2 81 2R 10395746 10395765 CATATCCAGGATGTCGTCCA 59 10395809 10395900 CCTGGCCGATATCATTTCC 58 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370 3 1 2 164 2R 11140508 11141561 CCCAATGGCATCATTGTGG 59 11141689 11141707 GTACTCACTATAGGGCGCA 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302790,FBtr0302791 3 5 13 102 2R 11838966 11840355 TCACTTAACATGACGTTGGAG 58 11838884 11838902 TCACCTGCAGACAGATCTC 58 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 2 2 5 100 2R 12021097 12021115 TCAACAGCAATTCGGTTGG 59 12021177 12023540 CACCACATACAGCAGTATGTC 58 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 3 3 3 82 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541076 12541164 CTAAGCCCGAATAGAACTTATCG 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 1 3 6 197 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678299 12678317 TCGGATCAAGTTCCAGGTG 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 2 3 6 198 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678300 12678318 CTCGGATCAAGTTCCAGGT 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 3 2 6 100 2R 12896437 12897014 ATCATTGTGAGACCGAGGAG 59 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 3 2 2 80 2R 12945342 12945424 GCATCTCTTATATGTCACCCA 57 12945462 12945484 GATCCTCAGGATACATTGTAGTG 58 NA Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 3 1 1 93 2R 13306950 13306968 CTACATCAACATCGCCGAG 58 13306712 13306732 GGAGAACTCGTACAAATACCC 58 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 3 2 2 102 2R 13477350 13477421 TGGAGAAGAATCTCACCCA 57 13477266 13477285 AAATTCAGTGGTTTGTCGTG 57 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900 2 1 2 90 2R 13474891 13475045 CGATGCAGGAATCTATCATGAC 59 13474822 13474840 AGATTTAGCTGCTTGTCGC 58 NA Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 1 1 1 71 2R 13557812 13557830 GGTCTATCAGGAGTGCGTC 59 13557923 13557941 TACTCAGATCCGACCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 3 1 1 79 2R 13613213 13613233 TCGTACTCTGAATCCATGGAG 59 13613094 13613112 ATCTGCAGCTTCAGATGCT 59 NA DesignNoJunction Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 2 3 3 92 2R 14007593 14007612 AGCAACAGTACGAGTAACAC 58 14007460 14007540 GAAGTTGACCTCAAAGTCCAG 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 2 2 2 80 2R 14073871 14073945 GACGTCTGATTAAGGAATACGTG 59 14073813 14073831 CCACCAGAATCGCAATACC 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 1 4 4 142 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646372 14646455 AAATTGCTTAAACCCTGCTCC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0114623 2 1 6 193 2R 15043696 15043714 AACACTATCGACACAGCAG 57 15043870 15046255 CGATAATACTCTGCTCAGCA 57 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 1 3 3 80 2R 15314635 15314715 GGCAGTATGGTAAATGGGT 57 15314759 15314777 TGGAGTGCATGTACATCAG 57 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086495 3 1 6 82 2R 15434003 15434022 GCAACCCTAACATCTACCGA 59 15425703 15433959 CAATAGCGGTGGTTCATTGG 59 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775,FBtr0112776 1 3 4 80 2R 16358014 16358035 GAGGATGAGTTCCTAAATCTGG 58 16358076 16359056 CAACGAGAGGTCTTCTTGC 58 NA Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 2 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220 3 3 5 85 2R 16493285 16493304 GAACGATCGTATCATCACCA 57 16493352 16493962 CATTCTCGTGTACGCTCTG 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 3 2 15 82 2R 16908770 16908788 CTTCGGATCACAGAACCAC 58 16909016 16910578 CCGTAACAATTGTCTGATGC 57 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 2 8 15 87 2R 16911181 16911199 GTTAACAGCCAGTTGCGAG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 3 8 8 102 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611606 18611625 AATGACACGTTGATCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573 1 1 3 81 2R 18664572 18664590 ACCATTTCTCCTATGGCGG 59 18646892 18664530 CCAAACTTTGGTCCTAGATCTG 58 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 3 2 2 81 2R 18706463 18706938 GACAACGAAGATTTCTCGGTG 59 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 1 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 3 2 2 103 2R 19571834 19571905 AAATGCACCCATTCGTGAG 58 19571971 19571990 CGCAAGAACCTCTTGTATCC 58 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0100330 2 1 3 83 2R 19644990 19645008 GATGGTCGTTGTACACCAC 58 19644062 19644945 GCTGCTGGTTACATTGTAGAC 59 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 1 3 3 100 2R 19948509 19948685 GAAGAACATCAAGCACAGTGG 59 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 2 3 3 101 2R 19948508 19948684 AGAAGAACATCAAGCACAGTG 58 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 3 2 2 99 2R 20024114 20024137 CATCCAGTTATCAGTTTCTAGAGG 58 20023980 20024056 ATAAAGAAGTTCAGCGCCG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 1 2 3 93 2R 20090333 20093344 CATTGGATCGTAGCATCTTGC 59 20090260 20090278 CTATTGATGAGCTGCCCGA 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 1 2 3 80 3L 147874 147949 GTATATGAAGCTTACTAGCTTGCG 59 147988 148006 GTTGTGGCCATGAAACAGG 59 NA Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 3 2 2 89 3L 197527 197597 AGCTAGAGGTTCGTTGCTG 59 197456 197475 CGCAGATGACATTCTCATCG 59 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 3 3 3 249 3L 224169 224977 AACTACGAAGTGAAGTCGCA 59 225772 225792 CGACGTAGTTTCTTGTTTGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 1 3 5 100 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235422 235440 TATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 2 10 10 80 3L 302294 302370 TGTGATGGTTACCTGCCAG 59 302411 302432 TATGTTGGAGAAGATAAGCCGA 59 NA Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 2 1 1 60 3L 841054 841073 GGAAGATATACGCCATAGCC 57 840962 840982 CTAGTGCTCTCCAAGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072659 2 1 3 103 3L 1262019 1269076 ACGAAGTCGATAATGATTGCC 59 1269141 1269159 GAGGTAGTAGCGCTTCTCC 59 NA Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 1 3 3 101 3L 1621165 1621183 TGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 3 5 5 99 3L 1743821 1743909 GAACTTGACAAACGGAGCTC 59 1743971 1743989 GAGCAGAACAGGATCCCAG 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072856 1 1 3 110 3L 1945586 1945663 GTCAAAGTTGCATCAGATTCGA 59 1945497 1945515 ATTGGGACTTACAGGCGAC 59 NA Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 2 2 2 60 3L 2299265 2299774 TAAAGCTGAGTGACCTTATGG 57 2299796 2299814 AGGATGAAGTTGATGCTCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 msn FBgn0010909 FBtr0072960 1 1 5 92 3L 2558032 2563832 TTGATCATGAAGCGCAAGC 59 2557958 2557976 GACATTGACGTGCGATTCC 59 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 2 5 5 86 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131026 3131120 TGGTTGAGAGTCGATATTATGGG 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 1 4 13 80 3L 3516816 3552793 AATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 3 7 13 128 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593424 3593444 CGAATGGTACTTCATCTCCTC 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 2 3 4 109 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833661 3836031 GTAAATGGAACCACTGCTGG 59 NA Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 2 1 1 74 3L 4003933 4003951 TGGAGGAACCCTACATGAC 58 4004160 4004178 AATTTGTGGCAGCTAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 1 2 6 84 3L 4129782 4130399 GTATCGTAAGGAAGATAGCGT 57 4129718 4129736 TATTGTCGGCATAAGGTCC 57 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0300621 3 1 2 95 3L 4180797 4180815 TCAGCTATTGGTACTGCCC 59 4180345 4180741 AGTTAACGATCTCTTCCTTGGT 59 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 2 3 3 62 3L 4262984 4263002 AATGAATCCCTTGATCGGG 57 4263028 4263046 CAGGACCTTCCAATCATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 2 3 3 103 3L 4369893 4369913 CGGTATACACCTTCATGTGGA 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0300031 1 1 2 80 3L 5500545 5500563 GAAGTGTGCCGAGAATCTG 58 5499379 5500502 GTTGACATTACTATGGGCGG 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 3 4 8 95 3L 5733292 5739571 CTGATGAAGGACCTAGGGTC 59 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 3 1 1 70 3L 6325574 6325593 CATTCATGTTCGAGGGAACG 59 6325246 6325264 GGACACGATGATCAGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 5 6 105 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583714 ATAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 1 4 4 80 3L 6683421 6683501 CTTCTTTGGATTAGGCAAAGG 57 6683361 6683379 GACCAGAACTCCAGTTTCG 58 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299691 2 1 3 60 3L 7324284 7324305 ATGAACCTTCTCAGATAACCAC 58 7324326 7324409 CGTTGGAAACAGTCTTCGT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 1 11 15 80 3L 7693413 7693498 AACTGTACAAGGAAGTCATCCA 59 7693354 7693374 TAGCTTCGAATGGTTCTACCT 58 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 1 1 1 60 3L 7888448 7888468 AAGATTGGATGCGATTACTCC 58 7888547 7888565 CTTCATCCTCCCACATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0076768,FBtr0300413 1 3 4 86 3L 7921071 7921089 CTGACCTTCACCAACAAGC 59 7919924 7921023 CATGTCGTTATCGTTTATGCG 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598 3 1 5 104 3L 8067833 8067851 GCAACCGTTGAACAAACCT 59 8067916 8086170 GAAGTCTGTCATCTTGACAGTG 59 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 2 2 2 76 3L 8177588 8177606 GTCTACTAATGGGCATGCT 57 8177474 8177492 ATTCCTTCGGTACTTCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153 1 1 2 103 3L 8344385 8344403 ATAATGGTAGTGGCGGACC 59 8344470 8344875 CTTGTACTCCTGATTGCCG 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 1 4 5 179 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347121 8347139 TTGTGAGAGTACCAGCGAC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 1 5 13 115 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630550 8630568 CTGGGATCGTACTGGACAG 59 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 1 3 3 80 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 1 2 2 60 3L 9404830 9404921 GATTGCTATCCGAGACGCT 59 9404945 9404963 TCCTCAACAATCCACTCCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 1 2 3 150 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574671 9574689 TTGAGCAACTCGATGTCCT 59 NA Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 2 2 2 297 3L 9851662 9851681 GCTCATCTTACGCTACATGG 58 9851110 9851128 GTCACAATGCCAACTCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076358 1 1 3 121 3L 9889727 9889818 CTACACCAAAGGCAATGGAG 59 9889625 9889643 GACATACCCGACAGGTGAC 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 2 3 5 127 3L 11219783 11219802 ACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 3 2 2 64 3L 11641365 11641383 ACAAATATAGCGACGCCGA 59 11641260 11641278 GAAGTCGTTTGTCCACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 1 4 4 80 3L 11780325 11780345 GAAACAATGGTCATTCCTCGG 59 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076056,FBtr0076057 3 4 5 194 3L 12021962 12048295 AGATCTCCAGTCCATCCGA 59 12020252 12021805 CCATCAACATCTTTCAGCGA 58 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 2 3 5 141 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474447 ACCATCTGGGATATACTGGC 58 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075788 2 1 2 144 3L 13972299 13972457 AAACCAGGAGTATCCTCCC 58 13972173 13972191 GTATCCATTCGAAGTGCCT 57 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 2 4 4 142 3L 15505710 15505729 TTCTGTACCACGATGAGGAG 59 15505834 15505911 ATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 1 2 4 107 3L 16404181 16404200 TATCTGTACCAGTTCTCGCG 59 16400451 16404114 ATCGACATTCTCGTATTTCAGG 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 1 4 4 79 3L 16398478 16398496 AGCAGGAGAAATCAAACGA 57 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 2 4 4 80 3L 16398478 16398497 GAGCAGGAGAAATCAAACGA 58 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 1 2 2 80 3L 16710876 16710894 CCTCTTTCCGGAGGATAGC 59 16710938 16711137 TTCTGTTGCGGATTTCCTG 58 NA Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 3 1 1 85 3L 16719217 16719240 GTTACTTACCCTCATCATGAAGAG 58 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 2 4 12 133 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890271 16890494 CTTGATGTAGGCTATGTCCAG 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 2 4 12 133 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890271 16890494 CTTGATGTAGGCTATGTCCAG 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302781,FBtr0302779 2 2 12 80 3L 16859981 16859999 ACCAAGGAACTCATGAGTG 57 16860041 16877033 TCTTATAATGGCACCCTTCTC 57 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 1 5 7 80 3L 16952972 16954605 CAGGAGCTACCAGATTCGA 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 1 2 5 80 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978437 16984130 GTAGTGGTCTGAGTCATCCT 58 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 1 4 4 80 3L 17008138 17008158 GATACCTTCAAGACCAAGTGC 59 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075245 2 1 2 143 3L 17332197 17332273 TTTACACGGACTAATTGCTCG 58 17332074 17332092 GTCGAAGAGGAGTAGCGAC 59 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 3 2 2 89 3L 17363245 17363327 TCACAGAGAATGCTGTTACTG 58 17363176 17363194 AAGTAATGGTTCCGGATGG 57 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0089387 1 1 2 100 3L 18480841 18480859 AGAAGAAGCGCTCTCACAG 59 18480333 18480565 CAAAGCCACCTGTGAAATCC 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 2 2 4 143 3L 18668069 18668328 TCCATACCAGATGAGCCTG 58 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075013 2 1 12 176 3L 19311969 19311987 CAAACTGAACAGTCGCCTC 59 19303883 19306261 TTATATCCGACCTTCTGGCC 59 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 1 2 3 81 3L 19488009 19489659 CTGCATGTGGTATTCCGAC 58 19487946 19487970 GATAGTAGGTCTCATTTACATAGGG 58 NA Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 2 1 1 76 3L 19530152 19530170 GTAACTCAACATGCCGTCC 58 19530272 19530290 AAGGCATATCGAGGATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 1 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 2 2 2 148 3L 20021395 20021413 TAAGATTGTACTCGCAGCG 57 20021151 20021224 GAGCTTCATTTGAGCAGTG 57 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 2 3 4 104 3L 20253578 20253970 GATGAGAACGCTATCCGAG 57 20254038 20254056 GTTCTGGAAGATCTGCCAG 57 NA Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 1 2 2 80 3L 20296378 20296396 ATGGATCATGGTCAACCGA 58 20296440 20300943 TCTGATATGGCGTCTGCTG 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616 2 1 4 89 3L 20958849 20959240 GAGCTGGATAAGGCTACCC 59 20958778 20958796 AGATTGTCGCAAAGCACAC 59 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 2 5 5 111 3L 21192061 21192083 GGATGGTAGACATATCTACAACC 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 1 3 3 171 3L 21428975 21428993 AGACCTTCCGTCAATCGTC 59 21429191 21429209 TGCTTCTTGCAGATGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 1 1 1 71 3L 21628842 21628860 AGTTCCTCACAGCTGTTCC 59 21629112 21629130 AGTGTTCCGTGTTGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 3 3 3 121 3L 21719351 21719370 AAATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078494 3 1 3 99 3L 22263005 22264018 GTATTCACATCTGAATCGCCC 59 22264660 22264678 GTCGTCTAGGTCAACGTCC 59 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 1 5 5 84 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776574 22776593 GTGCTCGTTCATTTGATCCA 59 NA Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 1 2 2 60 3L 22857207 22857225 TCTTTCTGGTGCTGTTCGT 59 22857247 22857267 TGACTACATTAGGCCAAGACC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 3 4 4 176 3R 206341 206431 ATACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 3 2 2 80 3R 231257 231329 GACGTACAACTAAGTCTGAGG 57 231371 231389 CAGCCTCTGGTAACTTACG 57 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 1 2 4 80 3R 271101 271122 TGGCTAACTGGACATTATAGCT 59 270273 271061 GGCATGAACCATCCTTAACG 59 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 3 2 3 80 3R 464124 464276 TAAGCCTACAGGCAAACCA 59 464062 464083 GTGGTGGACATATACTGATCCA 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 3 2 2 84 3R 1233859 1233877 GATACCTAGGATACGCGCT 58 1233432 1233812 TCCATGACGGATGAACTCTC 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 1 3 4 80 3R 1388740 1388758 CCCAGAAACCAACTGTCTC 58 1388608 1388698 GGTGTTGATCTCAACTTTGGT 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 1 2 12 92 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587158 1587375 ACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 3 3 12 82 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 2 3 12 81 3R 1586683 1587378 AATTCGGACATGTTATGGAGC 58 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 1 4 11 85 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734446 2735015 ATGGTTCTGATGGACCTGC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 3 7 11 120 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734450 2734603 TTCTGATGGACCTCTGTCAC 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0113200,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 1 9 9 84 3R 2924195 2924284 CTTTGACATTGCCTCGCTG 59 2924129 2924147 TATCAGGCTGGTCACATGC 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612 3 2 9 81 3R 2947046 2947065 GATTTGGGAATGTGACCACC 59 2946848 2947008 CAAATATAGCAAGTCTTCGAGTACC 59 NA Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 3 1 1 72 3R 3244767 3244787 TATACGTGCTCTTATGGAGGC 59 3245115 3245133 TTCATCGCTGACATCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0081822 3 1 2 80 3R 3832604 3832628 GGACTATGTGGACTTATATTTGGTG 59 3832488 3832567 TCCTTGTCGAGCTTAAAGCT 59 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0300544 2 1 3 88 3R 4542211 4542230 TTAGACAGTAACGGTGGAGC 59 4542280 4542631 TGATACCTGCTCTTCCACTG 59 NA InUTR Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 1 2 2 80 3R 4600741 4600759 ATTGGGTAACACCGCTCTC 59 4600615 4600703 CCATCCAAGTAAATCTCATATCCTG 59 NA Nonspecific Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 2 2 2 81 3R 4761392 4761661 GAGCATCAAGAGTGAATATCGA 58 4761703 4761721 AATGGTCAGCAGGAAATCC 57 NA Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 3 2 2 81 3R 4761331 4761351 ATATAGATAGTGAGGTGCGCG 59 4761391 4761660 CGATATTCACTCTTGATGCTCG 59 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 3 2 4 149 3R 4766777 4766795 TCAAGAAGGTTGGTCTGGG 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 3 2 2 76 3R 5121440 5121458 TTAGTGAACTGTCGACCGT 58 5121248 5121266 GCAATACGTTTGTGTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 1 2 14 81 3R 5262774 5262792 CAGGATCCTCAGAAGCTGG 59 5262835 5269747 AACAAACTGACTCACAGAAGC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 3 5 14 97 3R 5258549 5269739 CATTTCAGTTCCGGTGAGTC 59 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 3 3 3 91 3R 5399132 5399150 TGTACAACGGGATGATTGG 57 5398995 5399078 GAATATCGTCTTGGGACCAG 57 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 3 3 4 72 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520883 5520901 CCGATAGAACTCCGACCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 3 2 3 83 3R 6049760 6049888 CTGGAGCACTTTATAGAGGCA 59 6049697 6049715 GAATTCCGGGTAATGCAGC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 2 3 8 106 3R 6359726 6387644 TACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 3 5 5 127 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048082 7048293 CTTGTTGATCTTGGAGCCA 57 NA Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 2 2 2 81 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361494 7361512 AGGTGAGATTGATGTCGCT 58 NA Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 2 1 1 78 3R 7498790 7498808 CAGCCACGAGATTAATGGA 57 7498953 7498971 AGAACAGTGAACGGTTAGC 57 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 2 5 15 148 3R 7815047 7817812 AGTCCTCAGATAACTCCAGC 58 7814508 7814937 GATGGTGTCCACATTGAACG 59 NA Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 2 2 2 80 3R 8180558 8180651 TTTGGATATAGCATCCCTTGG 57 8180498 8180517 ATAGGCTGGTCATTTACCCA 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0114374 3 1 4 178 3R 9257602 9257620 GATCTATTGGCAAGGCGTC 58 9257066 9257400 GATAGTCACCCTGAGCTGAC 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 3 5 5 138 3R 9476209 9476539 CAACAAGGGTGACTTTGAGC 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 3 3 8 93 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488768 9491187 AATCCTTGAGATCCTGCCA 58 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300589 1 1 8 83 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488758 9491185 TCCTTGAGATCTAACGCGG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 1 8 8 81 3R 9487885 9487905 ATTCGAAGACTATCGTGATGC 58 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 2 3 3 86 3R 10126664 10126683 AAATGCATGAACGACTTCCT 58 10126732 10126959 GCTGACCAGGTCCTTAGAG 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0110961 2 1 3 102 3R 11015639 11015732 AGTCATGGTCATAGTCATGCA 59 11015796 11015814 ACTGATGGGTTATTCCGCC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 3 6 6 81 3R 11027854 11027872 TTCACAATGACGTTCCTGG 58 11027917 11027997 CGTAAACGTCCTTGCTAGC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 2 5 6 87 3R 11024794 11024813 CACATTCGGCACAATTTGTG 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129 2 1 3 204 3R 11087616 11088283 TCACAATCAAGCTGGAACG 58 11087430 11087448 GTGCGTCTATCTACACTGG 57 NA DesignRelaxed Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957 3 1 13 100 3R 11126777 11126795 CAACACCCGTCTAAAGGAG 57 11128938 11132074 CGATTAGGTCGTCTTCGAG 57 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083153 1 1 2 96 3R 11366292 11366379 CTTATAAGATCTTGCCCAGAGC 58 11366217 11366235 GAGTGGACAATCCTGTGCT 59 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 2 3 3 80 3R 11740153 11740173 GGATAAACTGACCAACGAGTG 59 11737878 11740114 GCAGATATTTCCTCTTTGTGCT 59 NA Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 1 2 2 106 3R 12030245 12030623 AACTACAAATATGAGAACGGCG 59 12030160 12030180 CCCTTCTTCAAGTATTCCAGC 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083334 1 1 6 80 3R 12458429 12458447 TAGTCCATCTGATCCACCG 58 12458488 12461268 CGTTCATAAACTTGAACGACTG 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347 1 1 6 87 3R 12558424 12558442 GTGTCCTGAAGATCCGACC 59 12536321 12550986 TGAGTATCTCTTACCCATGTCTG 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853 1 1 4 80 3R 13044912 13044936 TAGATGAGTATCTTATGGGTTCTCG 59 13044800 13044874 TACCCGATACAAAGCTGCC 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853 3 1 4 80 3R 13044911 13044934 GATGAGTATCTTATGGGTTCTCGA 59 13044798 13044873 GTTACCCGATACAAAGCTGC 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100377 3 1 7 135 3R 13832726 13832810 GCCTATGAGGGCTATGAAGG 59 13833035 13833056 GCATATTTACCTGCAGATCCTG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 3 3 14 92 3R 14340833 14340852 GGAACATCGAAACGGATGTG 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0301284 2 1 14 107 3R 14340833 14340852 GGAACATCGAAACGGATGTG 59 14261499 14288993 GGTCAGTGTTGTACCTGCT 59 NA Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 3 2 2 94 3R 14509013 14509032 GCTTCTGTCCTATGTTGCAG 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 1 5 5 80 3R 14587368 14587390 GTTTGTATCCAGGGAACTATCTC 58 14586863 14587330 AAAGTTGAGACGTCCATTGTC 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 2 2 5 95 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750866 14750887 AAGTCAAGAATATCCGTCTCAG 57 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 3 4 4 87 3R 15443470 15443562 TTCAAGAGCATGGTGATCAC 58 15443402 15443420 GCGAGAACATGATGAAGGG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 3 5 8 145 3R 16146161 16147204 TTCAACGATCACGATTTGGA 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 1 5 8 86 3R 16624124 16631682 TGAATACGTAGTCGGTAAACGT 59 16631729 16631747 CCTATTAAACCGCTCGGGT 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113255,FBtr0083959 3 3 8 179 3R 16625853 16625871 ATGATTACCCGAACGGTGG 59 16626014 16628021 GACCAACTCCCATAAGGCT 59 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 3 2 2 68 3R 16676606 16676624 GGACTAGAGACCATCGAGG 58 16676656 16676761 CAGTTGGTTCTTGACTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0300191 1 1 9 80 3R 16792266 16792285 CATCCTCTGCGATATACCAC 57 16792328 16792537 ATGGCAGGAATCATGTCAG 57 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 3 4 9 114 3R 16792914 16798905 GTGAACTCAAGGTTGATTTCGA 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 1 2 2 80 3R 16955074 16955159 TTTGCATGCATGTATTGCG 58 16955012 16955032 AATGCCTGGGTATTAACAGTG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 2 5 16 164 3R 17004777 17004798 CTTATGAACTCCATGAAGGTGG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 2 2 3 168 3R 17105828 17105846 AGGAGGAGTTCGAGATCCT 59 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 1 1 1 60 3R 17206625 17206643 CCCTAAGGAGCATCTACGG 59 17207095 17207113 GTCACCTGGCTGTTATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 3 2 2 81 3R 17604913 17605281 TCTATAGGAATCTGAGTGGCC 58 17604852 17604871 AACTCCATGTGAAAGTCTCC 57 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 1 4 6 89 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615474 17616441 CACGAATATAAGCACCGGAG 58 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263 2 1 3 98 3R 17693193 17693211 TGACCTCTCCAAACAGACC 59 17693035 17693131 TTAGTCTCTGGTCCCTGGT 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 1 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 2 2 2 85 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198002 18198020 TTCTTCTTTCCGACCTGCA 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 2 5 5 80 3R 18430300 18430377 AGCAGCTTTAAGAAGACTCC 57 18430418 18430438 CAAATACAGCACAAGATCACG 58 NA Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 3 2 2 82 3R 18902693 18907083 ACGAGGAGTTGGACAACTG 59 18902629 18902649 TGATGAGTAGGTCCTGTTGTC 59 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0084368,FBtr0084369 3 2 3 95 3R 18949028 18949046 CTGCATACGACCTCTCCTC 59 18949105 18949178 GTGTCAATCGGAGTAGCGT 59 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390 3 1 2 195 3R 19062429 19062894 GTGCATTTCTATCCGGTGG 58 19059869 19059887 GTTTCGTAACCGGATACCG 58 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0084388 1 1 2 80 3R 19076367 19076387 ACATCTCTAACAACCACAACC 58 19076248 19076325 GTGCTCATTGTTCTGACCT 57 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0301491,FBtr0084385,FBtr0084384,FBtr0100227 1 4 6 119 3R 19094008 19094115 CTTTAGTCAGCGACAGCAG 58 19093907 19093925 AACTGGTGTAACCTTGCTG 58 NA Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 3 3 3 87 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590550 ATTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 3 4 4 100 3R 19870979 19871169 GGAAATCAAGGTCAACTGGG 58 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273323 2 1 2 158 3R 20175810 20175828 GTGCTAATGCAGTCATCGG 59 20175947 20176459 TTTGTGTCAGTTCTTCGATCAG 59 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111012 1 1 2 104 3R 20417049 20417067 GTCGTAGCAGCGATAATGC 59 20417132 20441782 CGCGATTTATATTGAGCATCCA 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 2 2 2 61 3R 21098601 21098619 TGTTCCGAGCCTATTCGTC 59 21098644 21098719 CGAAGGCAGCATAGAAGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 1 4 4 80 3R 21448136 21448154 CGATCAATATTCAGCCGGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 2 3 7 81 3R 21577832 21577853 TTGGTGTTTACTCTTCGTTAGC 59 21575101 21577792 GCAAGTGGCCTCATTTATAGC 59 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 2 2 2 111 3R 21694500 21695268 GAGGGATCAGGTTGATCGT 58 21695343 21695361 CGATCGAGTTACCAAGTCG 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 3 4 10 116 3R 22416343 22416361 ACGATAATGACGACAGCGA 59 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 3 4 10 113 3R 22416346 22416364 ATAATGACGACAGCGACCA 59 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134 3 1 2 80 3R 22796053 22796378 TCCGTTTCACATTGTGCAC 59 22796421 22796440 AGAAGGCACAGGATCTTCTC 59 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0113296 3 1 3 90 3R 22887047 22887128 CAATCCAAGTTTCGTCGGA 58 22886975 22886996 TGACTATGATTGCTATCAGCAG 58 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 3 3 3 80 3R 23081101 23081182 GCATTATGCCTGTTAACATCAC 58 23081223 23081241 GCACTTGTATGGTGAGCAC 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582 1 2 3 95 3R 23869490 23901409 GCTGCACAAACAATTCCAC 58 23901468 23901486 GAGATTTCGCCGAATGGTG 59 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 1 1 1 79 3R 24108437 24108455 ATGGCACTGGTCTTATTGC 58 24108557 24108576 CAGCTTGCTGATGTTATCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303 2 1 2 93 3R 24313704 24313722 CAGATGCCGAGGTAGAAGG 59 24313778 24314483 AATTTGCTTCGTCTGGATCG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 3 6 6 86 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428547 24428565 GTTGGTCATTCTGCTTGGG 59 NA Nonspecific Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 1 3 6 147 3R 24637863 24638121 TATGGAAAGTCCAGGTCGC 59 24638450 24638468 CATGACCACTTGCTCTTCG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 3 4 13 136 3R 24714129 24714147 CGCTAACGCAACTCTTGAG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516 2 1 2 131 3R 24867952 24870097 GAGTTTATCTGTCTGCACGT 58 24870250 24870268 TTCACATTGAACCTCTGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 1 2 4 83 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940206 24940226 GTGGACTTTCAATTATGAGGC 57 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 2 2 4 90 3R 24941220 24941300 CAAGAAGGGTATTGAGGCTG 58 24941353 24941371 GTGGGTCTTTCGTACAGAG 57 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110908 2 1 4 80 3R 25142278 25142296 CCCTGTACTTCGTGTACCT 58 25142078 25142234 CGAATGAGTCCTCTTTGGC 58 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110908 3 1 4 80 3R 25142277 25142295 CCTGTACTTCGTGTACCTG 57 25142077 25142233 ACGAATGAGTCCTCTTTGG 57 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301746 1 1 2 85 3R 25662483 25662501 GACATGGTGCATTATGCGG 59 25662550 25662648 TACTGTGCTGGACTCTTGC 59 NA Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 2 2 2 129 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763338 25763358 ATGTATTCATCCGTGTTCCTG 58 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290050 1 1 2 188 3R 25996398 25996731 TAATGAGTGGAGCTGATGC 57 25996228 25996246 TATTGGAGTAGTCCACGGG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 3 4 5 135 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211856 26211874 GTTGTAGGGCTTGTTCTCG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 1 4 5 81 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211910 26211928 CTTGATCTCCAGGTCGAGG 59 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 3 4 5 135 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211856 26211874 GTTGTAGGGCTTGTTCTCG 58 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 2 2 2 91 3R 26317438 26317456 AATCTTCATCGATCCCTGC 57 26317511 26317597 ATCCAGATGTTGCCAATCC 57 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 3 2 2 160 3R 26705207 26705226 CAACTGACCTACAACATCCC 58 26704955 26705084 TTGTTGGTGGACTTTGAGG 57 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0113314 3 1 4 118 3R 27229895 27230065 CTTCAGTTCTGGCAGAATACC 58 27229797 27229815 AATCTTTGTGGAAGAGCGG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342 2 1 4 89 3R 12579456 12579480 CACTCCAGGATACCAAATATTACAC 59 12570425 12579409 GATAATGTGCTCAACGCGT 59 NA Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 3 1 1 83 3R 21094666 21094687 TCAGAGAAATGGACATGTACCA 59 21094733 21094751 CTGCAAACATCTTTCGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129 1 1 2 175 4 399150 399352 ATACATCGAAGCAGCATGC 58 398800 398820 CTGATTGAGCTCGCTAAACTG 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 2 4 4 80 4 714052 714071 TACCAACGATGAGGAGTACG 59 713454 714011 ACATGAGGTTGAATTTCCTCG 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 2 4 5 108 4 1036233 1037010 TAGATTTAGAGTGGAGAACAGGC 59 1036147 1036166 TAGTGCTGCAAAGTGTTGAG 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0089328,FBtr0301563 1 2 8 134 4 1128953 1131407 CAATCGGACCTTCCATTGG 58 1131503 1131922 AGGACGAATTTATCAAGCCAC 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 2 4 8 85 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129794 1129812 CAATGTGTTCTTGCCCGAC 59 NA Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 3 2 2 99 4 1194714 1194794 GACAATACAGACTCGACTGG 57 1194634 1194652 TACAACCCTTATGTGGGCA 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 1 5 5 80 4 1230675 1230693 CAAGTAGCTCAAGTGGCTG 58 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 3 2 4 81 U 1352553 1352571 CAAATTCGTGGTACGACGT 58 1352614 1352686 TTTGAATAACCGTCCAACCTC 58 NA Drosophila melanogaster 61 cin FBgn0000316 FBtr0070065 3 1 2 89 X 149785 149803 GTATCGTCAGTGGTTGCAG 58 149853 149930 CCAACATGTGTCGCTAATAGTC 59 NA InUTR Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070135 1 1 3 124 X 653711 653798 GGGTTTCGTCTTGTCTCCA 59 653886 653904 TCAGCAACAAGGCAAACAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 3 4 5 90 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786136 1787442 TGGTAGAGTATCATATCCTTGCTG 59 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 1 3 3 95 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800185 1800205 CAGCAGATAAAGGTACTTGCT 58 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 78 X 1965424 1965442 CAAGGAGTACAAGACCACG 57 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 78 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962427 1962445 ACTTGGACTGGTAGGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 3 12 12 80 X 3228356 3228597 TCGCTTAAGTTCAAACGCA 58 3228640 3228659 TTCGGAAATCTGATTTCCCG 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 2 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 2 3 3 172 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770547 3770570 GAACATGGTGAAGATATGGAAGAC 59 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 3 3 3 172 X 3770263 3770353 GGGTCAGCAGAAGAAACTG 58 3770547 3770568 ACATGGTGAAGATATGGAAGAC 58 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 3 1 1 155 X 3783470 3783488 AAGTTTGGACCGGAAGGAG 59 3783755 3783773 GTTGTCGCTGTCATAGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 2 2 2 84 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515241 4515259 GTAGCGGCAGTTAAAGGGA 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 1 4 6 117 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848233 4848252 GTCATTAAATCCGCGTCCAG 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 3 5 5 114 X 4962726 4962744 CAATCTCTGCGAGAAGAGC 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 1 2 2 116 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962704 5963098 TTTGGGCTTCTGAATAAAGGTG 59 NA InUTR Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070907 2 1 2 63 X 6246486 6246504 TTTCCGCACGGAAATTGTC 59 6252951 6252969 ATCATGCGAACATAGGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944 1 1 2 136 X 6483745 6483763 AAGTCACCTACAGGAGAGC 58 6483863 6484081 TTAGGTGGATGTAGCCCAC 58 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 3 4 4 75 X 6637145 6637163 TTACTCACGCGAGTCAGAC 59 6636287 6637106 GTTCTTGAAGTGCACACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 1 2 2 82 X 6662298 6662318 TCAAGATGTGGACATGATCGT 59 6662362 6662448 CCAATTTAGGCGCCTTCAG 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 1 3 6 105 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 3 2 2 60 X 6964929 6964949 GAAATCCCTCAGATACTTCCG 58 6965439 6965457 GAATTCCGGTACGTAGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0300836 1 1 2 122 X 7609089 7609107 GATAACGGAGAGTGAGGGA 57 7608506 7608524 CTGTCCTTCATTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 3 1 1 60 X 7966164 7966184 AAATAAGCGAGATAGACGAGG 57 7966060 7966078 CGCTGATCATTCGATGACC 58 NA DesignNoJunction Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236 3 1 3 130 X 8381712 8381730 CTACAAAGTGGCCAAGTCC 58 8381017 8381624 CATACGGGACCTTAAAGTTATAGTC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 1 4 6 83 X 8478541 8478559 GGAGATCCAGTCGATCGAG 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 1 3 3 80 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148064 9148155 GTGAGCAGATCAGAGTCCA 58 NA Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 1 2 2 60 X 9481077 9481095 GCCATACTCAATGACACCA 57 9481119 9481137 TGCAGTTGTGATTCTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 3 3 4 89 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674564 TTCAAATAGGCAGGAACCAC 58 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 2 3 4 96 X 10393679 10404376 AGGAAGGGACCTTCATAGTG 58 10393602 10393621 TAATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0273444 2 1 2 144 X 10504473 10504492 AACTACCTGGAGATGCATCG 59 10502861 10504366 CTTCAGCCATATCGCTGTG 58 NA Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 1 2 2 80 X 10774599 10775517 CAAAGTGAAGCCTGTGTACAC 59 10774539 10774557 TACATGCTCAGATCCGGAC 59 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 3 2 2 151 X 10983473 10983559 ATTCCTTATCGACCCTCGG 58 10983674 10983692 CTATCCTCCCAGAGTTGCA 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 3 4 15 123 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299398 11299416 AAGGTCATCGTTGATGCGA 59 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0073522 2 3 4 158 X 11567285 11567303 GTATATGCCATGCGCAAGG 59 11567486 11567774 CACTTGTTGGCCTTCATAGC 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0112848 2 1 4 92 X 13094934 13096788 TCTTTATTGGCGCAGATGAG 58 13094861 13094879 CTGATTATTCCCGACTCCG 57 NA Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 2 2 2 80 X 13114116 13114135 AAGGAGGATCAATGGATGGG 59 13113903 13114073 GCAGACGATTACCTTTCCG 58 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 3 3 3 85 X 13221559 13221577 TTCTCATGCACGATCTGCT 59 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 1 2 10 80 X 13490774 13494115 ATGAAGAGTACACAGGAGAGG 58 13490714 13490732 TCAGCTGATCATCGAGGTC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 3 2 8 122 X 14819703 14820802 TATCATAACGACGAGGCCG 59 14820885 14820906 CAATATGGCTCTCAAATGTCCT 58 NA Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 3 2 2 84 X 15651250 15651353 ATATCTATACGACGTTCGAGC 57 15651397 15651417 TGAACTTCTTTAGCATGAGGG 58 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 1 5 5 167 X 15688455 15688539 AAGATCCACGTAACAAAGTTCC 59 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 1 4 9 103 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717401 15717419 CGGAATTCCAGTTTCGTCC 58 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 3 5 5 81 X 15749871 15749891 TCTATAATCGCGTTGGAATGG 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 2 3 3 81 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965137 15965155 GCTTGCGATAGTTGATGGC 59 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 3 3 3 104 X 16532323 16532445 GTCTTCTTGAAGAAGACTGGC 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 2 2 2 99 X 17320860 17320879 CTCTAACCCGTCTCTGTGAG 59 17320940 17321461 ACAAAGCGGTATAGTCTGGG 59 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 2 3 3 86 X 18095257 18095335 AGATGGTAGGACAACAGCC 59 18095384 18095403 GGTTCTTGTCCATCTGATCG 58 NA Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 1 1 1 71 X 18660268 18660286 TTGATACCCACCAGTCGAC 59 18660153 18660171 GAAGAGCTCGTATCCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 2 3 4 85 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228548 19234544 AAATAAGTTCCGAGCAGCG 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 2 6 6 153 X 19417822 19417840 CACAAACACGATCTGGAGC 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074815,FBtr0074816 1 2 3 123 X 19638347 19638365 TATAGCTATCGCCAGGCTC 58 19635183 19635201 GTCTGACGATTTGTCGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 1 1 1 89 X 20045017 20045035 TACAATGGCGACCCATACC 59 20048259 20048277 CTCGCACTTGGTGTTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 3 2 13 96 X 20105915 20105933 CAGGCTACGAACATTCCAC 58 20103227 20105857 GATTGTATTCATCATCGCCGT 59 NA Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 1 2 2 139 X 20293017 20293100 CAATTACTGCTATCGCTGCG 59 20292897 20292915 GAAAGTAGTCCGCCTGAGG 59 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 2 4 4 93 X 20989791 20989905 TAATAGAGATGGAGGATCAGAATGG 59 20989956 20989974 GCCTTCTCACAGAATCCCA 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0299591 1 1 3 80 X 21004487 21004852 CAATGCCCACTAAATACTGCA 59 21004894 21004912 TGATGGTGTTCCAGGTGAG 59 NA Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 3 2 2 80 X 21195589 21195745 CGCTTCCAGTATTCGATCG 58 21195788 21195807 ACCTTAACGTTCTCTAAGCG 57 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 1 5 5 80 X 21473852 21474021 ATCTATGGTCATGGAGCGC 59 21473790 21473808 CGACGTTTGAATGTCCACC 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 2 3 5 95 X 21860082 21864240 TACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 snmRNA:430:CR33742 FBgn0053742 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-1 FBgn0046834 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG15126 FBgn0040729 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:184 FBgn0065102 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30235 FBgn0050235 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR33538 FBgn0053538 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-3316d FBgn0082969 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-281aS FBgn0067711 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S7:64D FBgn0011986 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32363 FBgn0052363 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135a FBgn0083012 FBtr0113575 1 1 1 64 X 17040730 17040748 TCATGGGTAGAATGGGCAC 59 17040684 17040705 TGATATCTTCAAGCACTAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1192b FBgn0083000 FBtr0113565 2 1 1 60 X 17038381 17038402 ACCAGATCAAACTCCAAATCTC 58 17038342 17038363 CATAGGACAGTTAAGTGGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077358 2 1 2 84 X 21930348 21930369 CAATCTTATTTCGCACCAAGAG 58 21930414 21930592 CTTAGTGCCATTCACCTGG 58 NA Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0077310,FBtr0300210 3 2 2 124 X 20340473 20340552 ATCGAACAGACACGAATGG 58 20340640 20340658 TTGTAGACGAACTCGTGGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1504 FBgn0031100 FBtr0077338 1 1 1 60 X 20182117 20182135 TTCTGCTGACCAACAATCC 58 20182075 20182093 TTGGTCAGGCTAGAGAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sdic4 FBgn0053499 FBtr0089612 1 1 1 80 X 20095849 20095936 GTATTCTACTTTGAGCGGCG 59 20095788 20095807 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 2 1 1 89 X 20045017 20045035 TACAATGGCGACCCATACC 59 20048259 20048277 CTCGCACTTGGTGTTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 1 3 3 80 X 19795512 19795911 CCGTATATGGAATATCCACCG 58 19795952 19795971 AATATGAGGCCCAGTATGGA 58 NA Drosophila melanogaster 61 skpE FBgn0031074 FBtr0074806 2 1 1 60 X 19717973 19717991 GATCTTTCCGACGGAAGTC 58 19717931 19717951 ATCCAACATGGTCTTGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074807 3 1 2 281 X 19676907 19676925 AAGTCCAACGAAGAAGTGC 58 19676299 19676317 CTCGGTCTTAATGCTCGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14232 FBgn0031061 FBtr0074813 1 1 1 87 X 19597496 19597514 CGAGGAGGGTTACAAGGAG 59 19597222 19597445 AGCGTACAGCTTAAACTGC 58 NA Drosophila melanogaster 61 Ubqn FBgn0031057 FBtr0074750 3 1 1 135 X 19578099 19578119 CGAAGTTGACGAAGATTCTGG 59 19578559 19578577 GTTGTGCATCTGAAGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 2 2 8 70 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19392909 19400529 TGTTCCTTCTGCTGACAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12204 FBgn0031022 FBtr0074783 3 1 1 75 X 19387625 19387643 TTAAGGAGCACAAGGACCG 59 19387568 19387586 TGCTGGTACCAATCTCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12203 FBgn0031021 FBtr0074712 3 1 1 93 X 19386968 19386986 CTGGCAAATCGAGTTCGAC 59 19387102 19387120 CTGCACGTTCATGTTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7349 FBgn0030975 FBtr0074648 2 1 1 138 X 18789919 18789994 TCATTGATTCCAGGGACGAG 59 18790095 18790113 TGAATGATGGCTCTAGCCG 59 NA Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074631 1 1 2 104 X 18669636 18669654 CAATTGGTGGAGAGCAAGC 59 18674773 18674791 GGTGTCTGTCAGATCGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593,FBtr0074594 2 2 2 93 X 18413274 18413354 TAAGTTGGATAAGTCGCCCT 58 18413410 18413428 GTACTCGCCAATTCGATCC 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 1 1 7 158 X 18007406 18007489 GAAACTCAGGTTGCTGCTG 59 18006671 18006692 TGCTTGATCAGAGATTTGAGTG 58 NA Drosophila melanogaster 61 Arp8 FBgn0030877 FBtr0074544 2 1 1 300 X 17754683 17754769 AAAGCAAACGATGCAACGA 59 17754401 17754419 CTCGAACTCCACCATCAGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 1 1 1 60 X 17484484 17484559 GAGGACACTGTGAAACAGC 58 17484583 17484601 ATGGATTCCTTCGATTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8664 FBgn0030836 FBtr0074445 2 1 1 159 X 17176703 17176721 AGTACTCAACGTCTGCCTC 59 17176324 17176342 GAACTCATCCTCCATTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 1 4 6 86 X 17165361 17165379 ATCACGGAGCCAAATTGTC 58 17165429 17165530 CATTCAGGCACTCAACCTG 58 NA Drosophila melanogaster 61 CG13001 FBgn0030806 FBtr0074417 1 1 1 66 X 16836288 16836306 GTGTACGAGGAGTACCTGG 58 16836240 16836258 TTAGTCCGAGATAGTCGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sap30 FBgn0030788 FBtr0074331 3 1 1 60 X 16682325 16682344 CACTTCAAGGTCCAAACGAG 59 16682366 16682609 TCATAATTGTATCCGCCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 1 7 7 60 X 16579562 16579580 GATATCCACGCACATGCAG 59 16579424 16579442 GAAGTTCTCGTAGTGCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 2 5 5 109 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276866 16276946 ACAAAGTTGTGCAAGTCCT 57 NA Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 3 2 2 80 X 16161737 16161817 AACACAAGTTCCACTTTACGAG 59 16161678 16161698 GGTTCTCCTGTATAGTTGGCA 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG11679 FBgn0030678 FBtr0074202 2 1 1 60 X 15632134 15632155 GAATGGCAAGTTCTTTGTTACC 58 15632095 15632117 GGAGAAGGTGTACTTATACAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089702 1 1 2 96 X 15471792 15471856 GAAATGGCAGAAGTCGTGTC 59 15471715 15471735 TCATTCGGATGAGATTCTCGG 59 NA Drosophila melanogaster 61 CG12608 FBgn0030630 FBtr0074018 2 1 1 87 X 15237682 15237701 CTTCATTCTTGCACACGAGG 59 15237520 15237632 TTTGATTTCACCAGCGCTG 59 NA Drosophila melanogaster 61 CG9030 FBgn0030599 FBtr0073971 1 1 1 81 X 14848370 14848388 ACAGGACTATAGGCAACGG 58 14847735 14848330 GGTTTAGACATAGAAAGGACACAG 59 NA Drosophila melanogaster 61 CG14406 FBgn0030595 FBtr0073977 2 1 1 84 X 14804714 14804732 GCAACTGAAACGGGAACTG 59 14804342 14804668 CACTTAGATCCGATGGATCGT 59 NA Drosophila melanogaster 61 CG9519 FBgn0030589 FBtr0073984 2 1 1 60 X 14749578 14749599 GGCGAATATCTACAATGAGACC 58 14749539 14749561 CTTAATGGGATACAGATACGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRNA-capping-enzyme FBgn0030556 FBtr0073922 1 1 1 83 X 14136466 14136484 ACTTTCACGACAAGATGCC 58 14136337 14136419 CCAGTTTCACCTTTAGCGT 58 NA Drosophila melanogaster 61 CG11584 FBgn0030541 FBtr0073893 2 1 1 134 X 14075125 14075236 GTGAAGATGAAACCCTTTGCA 59 14075332 14075350 CAATTGCTGGAAGCTCTGC 59 NA InUTR Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 2 2 2 153 X 13890549 13892140 GTTACGATCTCAACGAGAAGG 58 13892255 13892273 GGAATGGCATTGATCCCAG 58 NA InUTR Drosophila melanogaster 61 CG11063 FBgn0030530 FBtr0073834 3 1 1 82 X 13721665 13721683 GCAAGATCGAAGAGCTCAC 58 13721532 13721622 GTGACAAATGCCAAAGTATTCG 58 NA Drosophila melanogaster 61 CG10996 FBgn0030525 FBtr0073836 2 1 1 60 X 13691615 13691635 GGACATCTTTGGTATTGCGAC 59 13691575 13691593 GTAGCGACGAATCACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10993 FBgn0030524 FBtr0073837 2 1 1 102 X 13684732 13684809 AAGCTGTCAAGAAAGCCTC 58 13684648 13684666 GCTTGTAGTTGAGCAGTGG 58 NA DesignRelaxed Drosophila melanogaster 61 REG FBgn0029133 FBtr0073730 1 1 1 134 X 13106868 13106886 GTGGATGTCATCGTCTCTG 57 13106982 13107199 AAGTAGATTGGAATCCTCCAC 57 NA Drosophila melanogaster 61 rad FBgn0261379 FBtr0302269 1 1 1 80 X 12928192 12928281 ACGTCTGTCGTTATCGTGG 59 12928325 12928343 TTGTTTCCACGGTCATGGT 59 NA Drosophila melanogaster 61 CG4661 FBgn0030429 FBtr0073699 1 1 1 60 X 12750039 12750058 ACTAATGGCTCAAAGGACTC 57 12749998 12750016 CAATCGTGTCTTGATCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 3 2 2 219 X 12661317 12661335 ATCGTGTCGTTCAACTCGA 59 12663854 12663962 AGATGTTGAACATGCCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12717 FBgn0030420 FBtr0073704 1 1 1 60 X 12656701 12656721 CTGCTAGTTCTCATGACAACC 58 12656661 12656679 GTGGAGTTGTGACTTCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11085 FBgn0030408 FBtr0073656 1 1 1 151 X 12510775 12513695 AGATTCGGAACTGGAGCTC 59 12513810 12513828 ACTCCACACTGGATTCGTC 59 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445,FBtr0113444 1 2 2 81 X 12498605 12498686 TTTCATTCAGCGGGTTTGC 59 12498731 12498749 ACTCGCAAATGAGACACGA 59 NA Drosophila melanogaster 61 CG15735 FBgn0030364 FBtr0073621 3 1 1 80 X 11913911 11913931 TAAGAATGCTGATGTCAGTCC 57 11913972 11914056 CAGGAGACTTCATTGTACCC 57 NA Drosophila melanogaster 61 CG15741 FBgn0030338 FBtr0073606 3 1 1 60 X 11731823 11731841 CCACTACAACGACAGTTGC 59 11731781 11731799 GATGATGAACTGGACGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kmn1 FBgn0027259 FBtr0073541 2 1 1 127 X 11466324 11466342 TCTATCGAGCGGTGATCTC 58 11466157 11466234 GATCCCAGATATCGTCCAGG 59 NA Drosophila melanogaster 61 CG11699 FBgn0030311 FBtr0073510 3 1 1 113 X 11465132 11465210 AGCCAAGGATTTCCAGGAG 59 11465287 11465305 TTCATGAGGTCCGTGAGAC 59 NA Drosophila melanogaster 61 PGRP-SA FBgn0030310 FBtr0073509 3 1 1 86 X 11456304 11456383 TTAGTTACAACTTCCTGATCGG 58 11456430 11456448 TGTATCCATAGGTGTGGGC 58 NA Drosophila melanogaster 61 CG2157 FBgn0030244 FBtr0073382 3 1 1 116 X 10764129 10764226 TGGATTAGATGGTGCTGCA 59 10764305 10764324 CTAAGTCCCGATCCATAGCC 59 NA Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0071415 2 1 2 144 X 9905015 9905034 GATAAGGAGCAGGGCTACTG 59 9905137 9905216 CAATGACCATAACAGAGTTTCCC 59 NA Drosophila melanogaster 61 CG15247 FBgn0030156 FBtr0071397 2 1 1 83 X 9768867 9768885 GGAATACAAGCCAACGCAG 59 9768730 9768753 CTGCTCGATATACACAATTATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071374,FBtr0071373 1 2 2 98 X 9401287 9404202 TATCCTTCAGTGGCAGTCG 59 9401207 9401225 CATCCATGATGTCCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 Obp8a FBgn0030103 FBtr0071307 3 1 1 209 X 9108940 9108958 ATCACAGATCGGTTTGCTC 57 9109358 9109376 AGATAGTGACGCACATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7246 FBgn0030081 FBtr0071353 3 1 1 88 X 8974950 8974968 ATAGCTGAGATGCAGGAGC 59 8974823 8974900 ACGATTTCTCTGACCTGATCC 59 NA Drosophila melanogaster 61 Lim1 FBgn0026411 FBtr0071279 1 1 1 87 X 8681699 8681720 TGGACGACAATAAGTTCATCTG 58 8662966 8681652 ATTAATGAATCGCTCAGCGA 57 NA Drosophila melanogaster 61 CG12081 FBgn0030053 FBtr0071218 1 1 1 60 X 8483620 8483639 TCGTCGATGAGATCAACGAG 59 8483660 8483680 TCCATGGTGTCCAGATTAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0071215,FBtr0300751,FBtr0071214,FBtr0300750,FBtr0071216 3 6 6 81 X 8481544 8481626 ACTGATCAGCAATAGCAAGGA 59 8481669 8481687 GTTCACCGGGAAGTAGGTC 59 NA Drosophila melanogaster 61 CG1402 FBgn0029962 FBtr0300019 1 1 1 80 X 7731509 7732739 TGTTGTATAGAGGATTCTCCAC 57 7732780 7732798 AGGTGATGTAGTGATCCGT 57 NA Drosophila melanogaster 61 brk FBgn0024250 FBtr0071048 2 1 1 60 X 7204396 7204415 AACTACAGCCTCAATCTCCA 58 7204435 7204456 GTTGCATGTACATCAGATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4586 FBgn0029924 FBtr0071003 1 1 1 112 X 6864998 6865124 CATTGCCACCAGGTATTCC 58 6865197 6865218 CAATTTGCGGTAGAATCTTTGC 59 NA Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 3 2 2 84 X 6715183 6715256 ATTCCAGCCTACCATTCCA 58 6715304 6715322 CATACCACTGATTCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 l(1)G0148 FBgn0028360 FBtr0070950 1 1 1 85 X 6549440 6549458 ATTCAATGGAGCTGCAGTC 58 6549507 6549594 CATTGATGGCTTCTTCGCT 58 NA Nonspecific Drosophila melanogaster 61 swa FBgn0003655 FBtr0070922 2 1 1 60 X 6259384 6259403 GTCGTGATCAGGAGGATGAG 59 6259162 6259363 AGTTTATGATCATCGCCATCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3446 FBgn0029868 FBtr0070924 3 1 1 88 X 6244262 6244334 TATTCGAGCGAGGAGTCAC 59 6244192 6244210 TATCTTCTTGTAGCCGCCC 59 NA InUTR Drosophila melanogaster 61 Rpt4 FBgn0028685 FBtr0070929 1 1 1 82 X 6184795 6184879 GGATAAATTCATTGTGAAGGCC 58 6184734 6184752 ACTTCAGCTTGGCTTTGTC 58 NA Drosophila melanogaster 61 CG3149 FBgn0027564 FBtr0070846 1 1 1 108 X 5587321 5587410 GCATCGTCTGTTATTGGTACC 59 5587233 5587251 AGATCTCGATGAGCCAACG 59 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852,FBtr0070850,FBtr0070851 2 3 3 89 X 5559773 5559791 GCTGGAGGACTTTCTCCTG 59 5559501 5559519 GAACGGTAATCGGGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301950,FBtr0301953,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 2 7 7 95 X 5272542 5272669 TGTCTACACAAAGGCATCGT 59 5272722 5272745 GCATGGTAAGCTACTATAAGTCCT 60 NA Drosophila melanogaster 61 CG17764 FBgn0029751 FBtr0070757 1 1 1 60 X 5200922 5200940 CGTGCGGGATTTAGTTAGC 59 5200880 5200898 ATCATCCTCGCTATCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112950 1 1 5 105 X 4826656 4826677 AGTTGTTCTCCTCAACTAACCT 59 4825759 4826593 AAAGGACAACTCAGATAAACCG 58 NA InUTR Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070704 1 1 4 80 X 4582048 4585674 GCATCCCTACATCGTTACC 57 4585717 4585736 GTGCTTACAACTTCACTGGA 58 NA InUTR Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 2 2 2 84 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515241 4515259 GTAGCGGCAGTTAAAGGGA 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 2 3 3 82 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037711 4037731 CTCGCACATTACCACATAGTC 59 NA Drosophila melanogaster 61 Parg FBgn0023216 FBtr0070585 3 1 1 137 X 3564608 3564696 CTTTAACAGGCTTTACCAATCG 58 3564492 3564510 CGACGAACAAAGGTTACCA 58 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 2 3 3 82 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360595 3360614 TATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 CG14417 FBgn0040353 FBtr0070566 1 1 1 60 X 2769910 2769928 TCCCTTTGGTACCCATCAC 59 2769868 2769887 ATGCGAAGATTCATTGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dwg FBgn0000520 FBtr0070487 1 1 1 131 X 2622175 2622193 AGAGTCAGACTCATAGCCC 57 2622288 2622587 CTTCATCCAAATTGGCGAC 57 NA Drosophila melanogaster 61 CG2685 FBgn0024998 FBtr0070499 1 1 1 80 X 2607295 2607379 AATGCGACTCTATCACAATGAC 59 2607236 2607255 AGGCGCTTCTTCTCATACTC 59 NA Drosophila melanogaster 61 CG17776 FBgn0040899 FBtr0070390 3 1 1 73 X 2079010 2079028 CCGATTAACACCAACACGC 59 2079065 2079083 TACAGGGTGACTCCAATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344,FBtr0070345,FBtr0070343 1 3 3 80 X 1921370 1921388 AGCCTTTGAGTCTGACCTG 59 1920934 1921327 TCCAGAGTGTTAAGCTCCTG 59 NA Drosophila melanogaster 61 CG3857 FBgn0023520 FBtr0070349 1 1 1 60 X 1833018 1833037 ATTGCGTCTGATAAACGCTG 59 1832977 1832998 TACATAGCCTTTGCAATGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 futsch FBgn0259108 FBtr0300225,FBtr0112628 3 2 2 101 X 1327223 1327298 ATTCATTGATTACCTCGCGC 59 1327362 1327380 AACGTTGGATGGGTAAAGC 58 NA Drosophila melanogaster 61 CG11382 FBgn0040367 FBtr0070205 3 1 1 60 X 1104230 1104248 CTTCATCTTCGGCTGAGAC 58 1104272 1104290 AAACTTAGGCCAGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32815 FBgn0052815 FBtr0070166 2 1 1 74 X 827297 827315 CAGAGGATACGCAGCTACC 59 827493 827511 TTTCTTCCCTGGACCTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Rbf FBgn0015799 FBtr0070146 1 1 1 80 X 694341 694421 TGCAAGATGAGCATCTACGA 59 694280 694298 GTTGACAAACTCCTGAGGC 58 NA Drosophila melanogaster 61 l(1)sc FBgn0002561 FBtr0070074 1 1 1 60 X 304163 304181 AAACTGTGGTAAACTCGCT 57 304203 304223 ACCTTGGATAACTTCTTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41379 FBgn0085784 FBtr0114236 3 1 1 62 U 1397533 1397551 AGGCCCTCAACTATTGGTC 59 1397489 1397507 AGATGTACTCCGCTAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40712 FBgn0085768 FBtr0114218 1 1 1 60 U 9400700 9400718 CAATTGGAGGGCAAGTCTG 58 9400740 9400760 AATATACGCTATTGGAGCTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40968 FBgn0085546 FBtr0302238 1 1 1 60 U 6307298 6307321 CTACAATCGAGATAATGCTAGGAC 58 6307340 6307358 CTTTGAGCTTATCCAGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111046,FBtr0111045 1 2 3 60 4 996177 996199 CCTTCTCCATCTGTAAGTAAGTG 58 996216 996237 TACATACTTACATACTCACCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33797 FBgn0053797 FBtr0091801 1 1 1 60 4 864322 864343 GGTTGGTTTAATGGTCAAACAG 58 864361 864382 GTTGATGCGAAGATAATTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2126 FBgn0039876 FBtr0085857 1 1 1 80 3R 27601515 27601537 GATTTACTCGGCTCTTTACTTCC 59 27601403 27601479 GGAAAGGAGTAATAGATCAACCC 58 NA Drosophila melanogaster 61 sip3 FBgn0039875 FBtr0085842 3 1 1 85 3R 27598509 27598584 CTGCTAAGCAAGATCTTCCTG 58 27598631 27598649 GTCTCCGTAAGGGCATACC 59 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 3 2 2 81 3R 27214821 27214897 ACATATGCGAAACTGCTGG 58 27214941 27214960 TAAAGTATTGCGTGTTGCCG 59 NA Drosophila melanogaster 61 CG15561 FBgn0039829 FBtr0085776 3 1 1 60 3R 27041251 27041269 CCTACGACAACTTCCTGCA 59 27041209 27041227 GAGGTCTCAACCTCTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15547 FBgn0039809 FBtr0085715 1 1 1 90 3R 26708637 26708712 TCCCAACTATATTCACGAGCC 59 26708567 26708585 GTAGATCTCCTCGAGCAGC 59 NA Drosophila melanogaster 61 PH4alphaSG1 FBgn0051014 FBtr0085686 1 1 1 85 3R 26329651 26329669 CAATCTGCACAGTTCCACC 59 26329530 26329605 CATTGCAAATCCACTTTGATCC 58 NA Drosophila melanogaster 61 CG15514 FBgn0039712 FBtr0085523 1 1 1 60 3R 25686353 25686444 TCACCTTGAAGAAGAGGTCAC 59 25686313 25686332 CACAACGTACTCGTAGAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7593 FBgn0039687 FBtr0085461 2 1 1 80 3R 25550157 25550234 GACTGTGTCCTGTATTGTTACG 59 25550098 25550118 AGTGCTCATGATGAACTTTCC 58 NA Drosophila melanogaster 61 CG18110 FBgn0039677 FBtr0085449 3 1 1 80 3R 25496362 25496380 GTACTTCCAGGAGGAGACC 58 25496420 25496500 CCTCCATAGGAAACCATTAAGTC 58 NA Drosophila melanogaster 61 CG18110 FBgn0039677 FBtr0085449 2 1 1 80 3R 25496419 25496499 CGACTTAATGGTTTCCTATGGAG 59 25496539 25496557 TCCAAGAGTTCGTTGATGC 58 NA Drosophila melanogaster 61 CG2321 FBgn0039663 FBtr0085436 1 1 1 112 3R 25313965 25314036 AACTAGATCTTTCTCTGCCGA 58 25313873 25313891 ATAGTGGATCAGGGCATCG 59 NA Drosophila melanogaster 61 Slbp FBgn0041186 FBtr0085409 1 1 1 163 3R 24978771 24978789 GCATCCTCCATTTCGATCG 58 24978565 24978583 GACTCCAGATTACCGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 ligatin FBgn0041588 FBtr0085410 2 1 1 171 3R 24977153 24977171 CTGTACACCCTGTGGATCG 59 24976942 24977018 GGTTTACGGCCATCAACTG 59 NA Drosophila melanogaster 61 CG11842 FBgn0039629 FBtr0085362 1 1 1 87 3R 24878511 24878580 ATATAGCCAGGACGTGCAC 59 24878631 24878649 ATAATCGGAGCGTTCTCGA 58 NA Drosophila melanogaster 61 CG1443 FBgn0039620 FBtr0085345 3 1 1 95 3R 24820389 24820407 CACCTTCACCAAAGTCCTG 58 24819957 24820331 TAAGTGGTGATCACAATGCC 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 3 4 4 98 3R 24150590 24151219 CAACCACTGTTGATGCCAG 59 24150350 24150368 CAACGTTGCTAAAGTCGCT 59 NA Drosophila melanogaster 61 Or98a FBgn0039551 FBtr0085226 1 1 1 80 3R 23672839 23672920 AATATTAAGGTGGCTAAGCTGG 58 23672959 23672979 GTTCTTTGTCAATCTGTCAGC 57 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 2 4 4 190 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463952 23463971 GAGGTGACGTTCTCAAAGGA 59 NA Drosophila melanogaster 61 DNApol-alpha73 FBgn0005696 FBtr0114543 2 1 1 60 3R 23066100 23066120 TTTACGGACAGTACGGATCTC 59 23066142 23066160 CCTTGAGGTACTTGAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14258 FBgn0039482 FBtr0085103 3 1 1 85 3R 22918911 22918929 AAGTTGCCAAGTTCCTGAG 58 22918977 22919067 TAGGAAGTCGGGTTTCTCTG 58 NA Drosophila melanogaster 61 TwdlC FBgn0039469 FBtr0085075 2 1 1 180 3R 22820778 22821011 TTTGCCACTCAATGCTCAC 59 22821155 22821173 GTCATCGTAGGCATTCAGG 58 NA Drosophila melanogaster 61 CG6503 FBgn0040606 FBtr0085025 3 1 1 64 3R 22250590 22250608 CATTGAGCGTCCTGTTCAC 59 22250544 22250563 ACTTGTTGATGTTCAGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34130 FBgn0083966 FBtr0110871 2 1 1 60 3R 22014969 22014988 ATCAGCTTTGTGGTATCGTC 58 22014928 22014948 ATCCCTGGTAAATTGGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6142 FBgn0039415 FBtr0084987 3 1 1 82 3R 21961842 21961863 CAGGGACCATATACAATTCCAG 58 21961903 21961983 GGATAGTCCTTTGCAAATTTGG 58 NA Drosophila melanogaster 61 m1 FBgn0002578 FBtr0084957 1 1 1 68 3R 21840730 21840748 GAAAGGAATAGCGTGCAGG 59 21840842 21840860 ATTCTCGACGAACTCGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34024 FBgn0054024 FBtr0100079 2 1 1 74 3R 21756463 21756481 CAGTGCTCGCTAGTTTGTG 59 21757152 21757175 TGATGTCTATGGACATTAGGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0084909,FBtr0300819,FBtr0084910,FBtr0084911 1 5 5 85 3R 21711734 21712038 GCACAGCGATTATAGCCAC 59 21712087 21712105 CTTTCCATCTGTGCATGGC 59 NA Drosophila melanogaster 61 CG5112 FBgn0039341 FBtr0084878 3 1 1 60 3R 21318280 21318298 AACATTTCGAGGCAGTGAG 58 21318321 21318340 AGCTTGGTATAGGGCAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11902 FBgn0028647 FBtr0300735 3 1 1 80 3R 21161571 21161589 TTGGAACTTAAGTGGCAGC 58 21161632 21161705 TTCCACTTGATCTTCATCGC 58 NA Drosophila melanogaster 61 CG31097 FBgn0051097 FBtr0290052 1 1 1 106 3R 21122398 21122418 CTCATCGACTTCTTGAGAGTC 58 21122253 21122332 GCAAAGAATGCAGAGAAAGTG 58 NA Drosophila melanogaster 61 CG10513 FBgn0039311 FBtr0114505 2 1 1 95 3R 21101771 21101855 ATTCTTTGCTGTCACAGTCG 58 21101695 21101714 TCGTCATCCTTCATCAAAGC 58 NA Drosophila melanogaster 61 CG42503 FBgn0260229 FBtr0300637 2 1 1 60 3R 20951585 20951604 AAATAGACTGCTGCAACTGG 58 20951485 20951563 TTCACGTTTGGTGAAGTGTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 1 2 2 97 3R 20874424 20874442 CAATACAGTCCCGAAGCCT 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 2 2 2 142 3R 20691553 20691738 TTACCAAAGTGCAGGTGCT 59 20691844 20691862 CAGGATAGGCACCAGTTCC 59 NA Drosophila melanogaster 61 CG5789 FBgn0039207 FBtr0089906 3 1 1 81 3R 20367133 20367152 GCCTTAATACGGATGACCTG 58 20366965 20367090 AACCATTGATCCTCCAAACG 58 NA Drosophila melanogaster 61 CG18669 FBgn0040599 FBtr0113329 1 1 1 85 3R 20193155 20193173 AAGATGGATTCCTGGGTCG 59 20192823 20193108 TGACGTGATTTGACTCATCAG 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 1 4 4 116 3R 20048096 20048116 TCCTGAGAAAGTATCTAGCCG 58 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 sec10 FBgn0027103 FBtr0084547 2 1 1 81 3R 19960654 19960733 GAGGAGTTTGAACAGGAACC 58 19960775 19960795 TGTTCTGGAGTTCATTGTTGG 58 NA Drosophila melanogaster 61 CG13822 FBgn0039098 FBtr0084434 2 1 1 101 3R 19503801 19503820 GAACCACGGCAGAAATACTG 59 19503880 19503975 CGTAAGGATCAAAGTCATTCTCG 59 NA Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0290252,FBtr0112485 1 2 2 60 3R 19332951 19332970 ATATCCGCACCACATATCCT 58 19332910 19332931 CAAATACTTCTTTAAGCACGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATPsyn-Cf6 FBgn0016119 FBtr0084432 1 1 1 60 3R 19181359 19181377 GCGAGTACAAGCAGAAGAG 58 19181253 19181271 CGCTCAATATCGGGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 1 2 2 126 3R 19079153 19079171 AGACAGTTATGGACGTCGT 58 19079261 19079337 GAATAGATCTTGGTGCGCA 58 NA Drosophila melanogaster 61 CG17110 FBgn0039050 FBtr0084350 3 1 1 100 3R 18920428 18920446 GATTTCACGCTGAAGTGCC 59 18920504 18920583 GTGATCAAACCTAGTTCATCTAGTC 59 NA Drosophila melanogaster 61 CG7031 FBgn0039027 FBtr0084313 1 1 1 122 3R 18630088 18630509 TTAATTTGCAGATGCCGCT 58 18630592 18630613 CCATATTGTGATACAATGGCTG 57 NA Drosophila melanogaster 61 Cyp6d4 FBgn0039006 FBtr0084304 1 1 1 82 3R 18524994 18525012 ATTCAGCTGAGGAATACCG 57 18525056 18525136 TTAATATGACCATCGGGTGTC 57 NA Drosophila melanogaster 61 CG5791 FBgn0040582 FBtr0084180 1 1 1 175 3R 17913074 17913161 TCTGACTTGTCCCAATCCG 59 17913300 17913318 ATCTGCCATTGACGATGGT 59 NA Drosophila melanogaster 61 CG6015 FBgn0038927 FBtr0084183 3 1 1 81 3R 17858471 17858550 ATCATTTGTTGGGACACTCG 58 17858409 17858427 CAAAGGTGATGGTGCTCAC 59 NA Drosophila melanogaster 61 Gr93a FBgn0041229 FBtr0084133 1 1 1 110 3R 17659392 17659410 GTGTGCGGATTATACGGTG 58 17659482 17659563 CCGAGAAATGTTTCAACACTC 57 NA Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 3 1 1 178 3R 17357664 17357761 GATGAAGGTGTGGAAACGA 57 17357357 17357379 CCAGACAATTATGGATTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5697 FBgn0038846 FBtr0084001 3 1 1 161 3R 16842141 16842233 AACTGCTGACTATTCCTACG 57 16842357 16842375 CAGACACTGTCGGAATAGG 57 NA Drosophila melanogaster 61 TotZ FBgn0044809 FBtr0083974 2 1 1 139 3R 16703503 16703577 CGACTAAGCTTTGTTCTGGC 59 16703679 16703697 ATATCCACCTGGGTGTTGG 59 NA Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 2 2 2 89 3R 16333759 16333777 CTATTTGCTGGATCCCACG 58 16333615 16333708 TGATTAACGGCAAATCCAGAC 59 NA Drosophila melanogaster 61 CG10881 FBgn0038796 FBtr0083885 2 1 1 60 3R 16234149 16234170 TGACGGAGTATAAGTTCAACGA 59 16234191 16234209 ATCTTGAAGGTTCGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 3 2 5 151 3R 15842344 15842362 GACATTAAGGAGCGAACGG 58 15842474 15842563 CAAGAGATTGCCTATTCATCCT 58 NA InUTR Drosophila melanogaster 61 CG42508 FBgn0260234 FBtr0300643 2 1 1 60 3R 15740830 15740849 CAAGGATCTAAATTCCGGCT 57 15740721 15740808 CATCATTTCAAATGCCTCCG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 2 3 3 80 3R 15071132 15071289 TCTCAAACTCTACTAACTGTCC 57 15071073 15071091 AGTGGGATCTTCAAGAGGA 57 NA Drosophila melanogaster 61 CG11703 FBgn0038690 FBtr0083744 2 1 1 60 3R 15053685 15053703 AAATTGTTCGGACGCACAG 59 15053643 15053663 ATAGTACCAGGTAGAAGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rh2 FBgn0003248 FBtr0083697 3 1 1 129 3R 14726194 14726213 TTGTCATTTGCTACTTCGGA 57 14726305 14726405 TACTTGGGATGGCTAATGC 57 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0289999,FBtr0083625 2 2 6 135 3R 14225620 14225638 GTATCCAGCGATCCAACCA 59 14225797 14225815 TTGGACAGATCCTGATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14315 FBgn0038568 FBtr0083547 3 1 1 60 3R 13984925 13984946 GTGTTATCTATCTGCTGCACTG 59 13984965 13984985 GAATCGTCATTCGACAGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7606 FBgn0040565 FBtr0300628 3 1 1 159 3R 13422301 13422320 TAATCATCCTGGTTGCCCTG 59 13422442 13422460 GAGGAAGGACATCGACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089895 2 1 3 89 3R 13219600 13219618 ACCCTAAGATGCAAGGAGG 58 13219314 13219549 AATTGTGAGCTTCTTCACCTG 58 NA Drosophila melanogaster 61 CG34278 FBgn0085307 FBtr0112473 1 1 1 60 3R 12946296 12946315 TGATTCAACTACGGAACAGG 57 12946338 12946356 CAAGGGAGCTAGGGTAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Patr-1 FBgn0028470 FBtr0083392 1 1 1 80 3R 12872448 12872469 CTCCTAGTGAGCATTTCATCTG 58 12872510 12872584 AAGGATTCCAAAGCGACTG 58 NA Drosophila melanogaster 61 CG17565 FBgn0038424 FBtr0083286 3 1 1 60 3R 12259202 12259283 CCAGTTTCTAAGCAACTGCC 59 12259306 12259324 ATACTGTCCAGGTCCTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG10264 FBgn0038394 FBtr0083222 2 1 1 74 3R 11869438 11869456 ATTGTCAACGACAAGCTGC 59 11869707 11869725 CTCGTTCGGATTAGAGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9593 FBgn0038365 FBtr0083178 2 1 1 132 3R 11627925 11628175 TGGCCAACATGAGCTAGTC 59 11628271 11628289 AGGTACTTGCACAACTGCA 59 NA Drosophila melanogaster 61 CG31446 FBgn0051446 FBtr0083163 1 1 1 80 3R 11518930 11518951 CAGAGTAATGATTATGTGGCCC 59 11518990 11519068 CCACCAAATTCCAGAGAACAG 59 NA Drosophila melanogaster 61 h-cup FBgn0038334 FBtr0083107 1 1 1 60 3R 11207940 11207960 GCATAGATAGCTTCCTCTCCT 58 11207900 11207918 GAGCACTCCGAATCATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6499 FBgn0038309 FBtr0113238 3 1 1 91 3R 11073839 11073912 CACCAGCTCCATCTATTCC 57 11073766 11073784 TAATGGACACTAGGGAGCC 58 NA Drosophila melanogaster 61 CG6752 FBgn0038296 FBtr0083029 3 1 1 87 3R 11018725 11018803 TACGAACTTTGACGACTGCT 59 11018657 11018675 TCCAGCAGAATAGGCAGTG 59 NA Drosophila melanogaster 61 CG6912 FBgn0038290 FBtr0083038 2 1 1 122 3R 10962463 10962482 GATATCAGGATGTCAACGGC 58 10962103 10962201 TAAGAAAGTATCCAGGCCCG 59 NA Drosophila melanogaster 61 soti FBgn0038225 FBtr0082940 2 1 1 60 3R 10206879 10206899 GCGAGTACTTTGCAAATTACC 58 10206839 10206860 ATACCATTCGGGTAGTTCTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14355 FBgn0038208 FBtr0082907 3 1 1 87 3R 9976930 9977029 ATGTGCATTGCTGATGAGC 59 9976861 9976885 CACCCATTACGAACATAATATCCTG 59 NA Drosophila melanogaster 61 CG9312 FBgn0038179 FBtr0082825 1 1 1 79 3R 9591685 9591703 ATAAGCACCCAGAGTCTGC 59 9591830 9591848 AAATCGTCACTGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17025 FBgn0040554 FBtr0082792 2 1 1 81 3R 9284262 9291443 CACCAGAAAGCTAAATGACTG 57 9284201 9284220 GTACAAGATGTCCTGGTTCC 58 NA InUTR Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 113 3R 9210298 9210407 TTTGGAGGACTTTGATCCCA 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8630 FBgn0038130 FBtr0082737 3 1 1 110 3R 9109262 9109280 AACTACCACCACGTCTTCC 59 9109352 9109429 ATAGGCTTGTCCGATCTTAGC 59 NA Drosophila melanogaster 61 Paip2 FBgn0038100 FBtr0082693 1 1 1 109 3R 8809505 8809523 TTTACGTAGTGGACGACGA 58 8809596 8809677 TTGCAGTTCGTTCTTGTCG 59 NA Drosophila melanogaster 61 CG31347 FBgn0051347 FBtr0082664 1 1 1 60 3R 8517965 8517983 ATGTGGAGTCTATTCCCGT 57 8517923 8517941 CTGTCGAAGTCCATTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630 1 1 5 191 3R 8269848 8270528 GGTGTAATCCAGTTGATGCA 58 8270682 8270700 ATGTCCTTGACAAGACCAC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17202 FBgn0038043 FBtr0082587 2 1 1 89 3R 8248585 8248665 CCTTTAAGCCCATTGACCC 58 8248717 8248736 GTATGAAGAGCTTGGTCAGC 58 NA Drosophila melanogaster 61 CG4702 FBgn0037992 FBtr0082550 3 1 1 81 3R 7949093 7949195 TATCTCCATGGGTCTTCGC 59 7949030 7949048 ACCGTTGTCGACCTTATCG 59 NA Drosophila melanogaster 61 aur FBgn0000147 FBtr0082483 2 1 1 111 3R 7789113 7789195 CTATTGGGAAAGAAGCCCA 57 7789270 7789288 CTATGGAATTGGAGCCTCC 57 NA Drosophila melanogaster 61 CG18764 FBgn0042205 FBtr0082417 3 1 1 102 3R 7453765 7453856 TCCACGAAAGGACTCACAC 59 7453921 7453940 GTATGGATTAGTTCGTGCCG 58 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 3 2 2 87 3R 7414839 7414857 CATAAGTTCACGCACCTGC 59 7414716 7414792 GATGAACCATAAGATCTTGCCTG 59 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 3 3 3 190 3R 7279014 7279184 AGATTGGAGAACCGAACTG 57 7278842 7278860 TTATGTGGGTAAAGTGCGG 57 NA Drosophila melanogaster 61 CG4706 FBgn0037862 FBtr0082336 3 1 1 60 3R 6964338 6964359 CAAGGATGTAAAGATGGGAGAG 58 6964377 6964398 GGTGAAGTTGCGATTATACGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sodh-2 FBgn0022359 FBtr0082324 3 1 1 93 3R 6703535 6703613 TACTGCAATGATTATTCCGCC 58 6703668 6703686 TCTCCGTGATGTCGTAGTG 58 NA Drosophila melanogaster 61 Sodh-2 FBgn0022359 FBtr0082324 1 1 1 90 3R 6703538 6703614 TGCAATGATTATTCCGCCG 59 6703668 6703686 TCTCCGTGATGTCGTAGTG 58 NA Drosophila melanogaster 61 CG31272 FBgn0051272 FBtr0082312 2 1 1 80 3R 6582678 6582759 AACGCATGATGACTTACGG 58 6582616 6582635 GTGTCATTAGACTGCTCACG 58 NA Drosophila melanogaster 61 CG6254 FBgn0037794 FBtr0082184 3 1 1 94 3R 5985597 5985615 GGATCACAAACTTGTGCAC 57 5985458 5985542 CTAAATGGATCTTTAACCTCGC 57 NA Drosophila melanogaster 61 CG12945 FBgn0037755 FBtr0113214 1 1 1 80 3R 5616085 5616105 TTCAATTGTACTAGGAGGCGT 59 5615971 5616049 CTATCGATGTCTAATTCTCTGTTGC 59 NA Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583,FBtr0082134 3 2 2 82 3R 5593799 5593818 GTTCTGTTCACTTCGTCGTG 59 5594645 5594663 CATTGAATGGAGGAAGCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8412 FBgn0037743 FBtr0082130 1 1 1 80 3R 5583080 5583099 TCACTATTACGCAGTTCCAC 57 5583142 5583226 CAAAGAGCACTATCGGCAG 58 NA Drosophila melanogaster 61 eca FBgn0069242 FBtr0082098 1 1 1 82 3R 5511015 5511033 CCACATATCGGAGACGGAG 59 5510889 5510975 GCTCTACCTTGTAGTTAACAATCAC 59 NA Drosophila melanogaster 61 AP-47 FBgn0024833 FBtr0082114 2 1 1 99 3R 5384083 5384160 TGAACACGCATGTCAAACC 59 5384002 5384020 TTGAACTGAGACTTCGCCT 59 NA Drosophila melanogaster 61 Ras85D FBgn0003205 FBtr0082122 1 1 1 88 3R 5337713 5337888 GCAAGTGGTTATCGATGGAG 58 5337644 5337662 TATACTGATCCCGCATGGC 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 1 3 3 95 3R 5284385 5284403 TCAGCCTGATCAAATCCGG 59 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091946 1 1 2 173 3R 5181418 5182158 TAAATAAGCACAAGCGACAGC 59 5182293 5182311 CTTATGTTGCTGCTTCCGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081994,FBtr0081990,FBtr0081993 3 5 5 127 3R 4897393 4897487 TCAGCATGTGCTTGAACAC 59 4897284 4897305 CATGGGTAACACATTTCTCCAC 59 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 CG9839 FBgn0037633 FBtr0081934 3 1 1 84 3R 4630962 4630980 GAGAGTGATTCCGACGAGG 59 4630831 4630916 CGTAGTCATCCATATCGTCCT 59 NA Drosophila melanogaster 61 CG7994 FBgn0037599 FBtr0081875 1 1 1 105 3R 4417558 4417576 ATCACCGATCTCATGGTCG 59 4417645 4418102 ACTCTTCCACTCTGTTCCG 59 NA Drosophila melanogaster 61 Or85c FBgn0037591 FBtr0081899 1 1 1 80 3R 4337834 4337853 TTCCTGTTCTCGTCCTTGTC 59 4337714 4337791 CGATAAGCTAGAGCTCGCA 59 NA Drosophila melanogaster 61 Or85b FBgn0037590 FBtr0081900 3 1 1 83 3R 4335968 4335987 ATAGCTAGATCGCAGAAGGT 58 4335847 4335925 TTGAAGCAGATCTGTCATAGTG 58 NA Drosophila melanogaster 61 mRpL1 FBgn0037566 FBtr0081832 2 1 1 80 3R 4127779 4127858 CAAGGGAAATAATGAAGTCCTGG 59 4127893 4127916 GTAATATCCTTAATGAGCTCCACG 59 NA Drosophila melanogaster 61 CG10092 FBgn0037526 FBtr0081752 2 1 1 121 3R 3714212 3714293 ACATAAGTGCCACTACCAGAG 59 3714376 3714394 GAACTCGTGATCTCGTTGC 59 NA Drosophila melanogaster 61 CG14607 FBgn0037488 FBtr0081575 3 1 1 101 3R 3068388 3068457 CAAGTCCAGGCTCAAAGTG 58 3068522 3068540 TGTTGGATATGGTGCAGGT 59 NA Drosophila melanogaster 61 e(y)2b FBgn0040670 FBtr0081562 3 1 1 111 3R 2920109 2920196 CAAATAGTCCCGCAAGCTC 59 2920271 2920289 TAAGGATGGAACCGATGGG 58 NA InUTR Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081686,FBtr0081685,FBtr0081684 1 4 4 80 3R 2473633 2473708 AATCTACCGATTCAAAGGATGC 59 2473748 2473767 CCACATTCTGGTACTTGGAC 58 NA Drosophila melanogaster 61 CG15185 FBgn0037449 FBtr0081675 1 1 1 60 3R 2353717 2353740 CGTCTGATACTATTAGCCATTCAC 59 2353758 2353777 TAACAGATTACGCCTGTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 2 2 2 118 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161728 2161749 GGATATAGTTCTCAATGGCGTC 58 NA Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604 2 1 2 139 3R 2114160 2114178 TGAGAAGCGTGATTAGCGA 59 2114919 2114937 TTGAAAGCGACCTTGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1075 FBgn0037397 FBtr0078583 2 1 1 60 3R 1854286 1854304 TAAGCTGGCTCGAAATTGC 58 1854429 1854450 TACCAGTTTCGCAATACTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pbprp3 FBgn0011281 FBtr0078656 2 1 1 130 3R 1798843 1798940 TGACGAGAACTATCCACCG 58 1798304 1798322 TCTCGTCCTCGTGAATCTC 58 NA Drosophila melanogaster 61 CG14676 FBgn0037388 FBtr0078645 2 1 1 60 3R 1673645 1673667 ACAATCTAACCACCTACTACGAG 59 1673686 1673705 CCATCCTTGGCCTTTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2023 FBgn0037383 FBtr0078666 1 1 1 80 3R 1650135 1650154 GATGCGTTTACATTACAGGC 57 1650021 1650094 CAGGATGTCGTGTATTATTGC 57 NA Drosophila melanogaster 61 CG12170 FBgn0037356 FBtr0078709 2 1 1 60 3R 1464156 1464174 CCATCAACATTGAGCACCT 58 1464197 1464216 GACCAATCAGTAGCTTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 1 2 2 108 3R 1294737 1294810 TAGTTCGGTCTACTGGTGG 58 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1172 FBgn0037321 FBtr0078792 3 1 1 99 3R 1220441 1221255 TCCCAATGGCTACCTTACAG 59 1221312 1221335 CTCCTCCTTTACGATATTTATGGG 58 NA Drosophila melanogaster 61 Prosbeta2R2 FBgn0037296 FBtr0078831 2 1 1 78 3R 1045114 1045132 GAAATACCCAGACCGATCG 57 1044660 1045073 TAGTTGTTTGTTGCGCAGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14651 FBgn0037254 FBtr0299947 2 1 1 60 3R 307543 307564 CAGTTTATCCTTAAGATGCCCA 58 307583 307603 ATTCCTTGAGGTTGATGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt14 FBgn0261086 FBtr0078957 3 1 1 69 3R 142823 143388 CAACAACGATGACGAACCC 59 142772 142790 AACCAGTAGGTCATCCGAC 58 NA DesignRelaxed Drosophila melanogaster 61 Or82a FBgn0041621 FBtr0078977 2 1 1 80 3R 83835 83913 AAGGCTGAGAGTCTACAAGTC 59 83953 83973 CAAAGATGTACGTGTCTTGGG 59 NA Drosophila melanogaster 61 abs FBgn0015331 FBtr0078967 3 1 1 60 3R 60052 60071 CAATGAACGTCACCCAACAG 59 60092 60112 AGCAAATATACCACCTTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr014:3L FBgn0046272 FBtr0091955 2 1 1 210 3L 14028017 14028035 AGCTTAAGCATTGCTTGGA 57 14027825 14027844 ACTATTGCAATCTGCTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr008:3L FBgn0047000 FBtr0091957 2 1 1 106 3L 6213767 6213847 GTATCTAGTTGGCTGCGTG 58 6213917 6213935 GGGACCTCTAGCTAACCTC 58 NA Drosophila melanogaster 61 CG12460 FBgn0040045 FBtr0302384 2 1 1 137 3L 24527955 24527977 GGAAATTAGGGAAATGATCCAGG 59 24528074 24528195 CCAGAAATGCTTCGCAAGG 59 NA Drosophila melanogaster 61 CG40298 FBgn0058298 FBtr0111169 3 1 1 60 3L 23720685 23720705 ATGTGTATTCCGTAACGAAGC 58 23720727 23720745 ATGCGAAACTCAAGTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRalpha-80B FBgn0037212 FBtr0300118 3 1 1 80 3L 23232108 23255818 TGGGTTTAAGGTTGATCTGAG 57 23255859 23255878 AATTCAGATAGGTCCACACC 57 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078581 3 1 3 105 3L 22789579 22790217 GGCAAATTTCGCAAATTCGA 58 22789493 22789517 GAGTATAAGTTGGAGGATTGATACG 59 NA InUTR Drosophila melanogaster 61 Trxr-2 FBgn0037170 FBtr0078514 1 1 1 60 3L 22544363 22544381 CTCATCGAGGACCTCAACC 59 22544403 22544423 CCACAATCTTGTCGTCATGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509,FBtr0112842 2 2 2 110 3L 22333732 22400000 GAAGACAAGGCTTCCTCCT 59 22333640 22333661 GATTGTTAACGGTTAAACGACC 58 NA Drosophila melanogaster 61 CG10584 FBgn0037045 FBtr0078327 1 1 1 60 3L 21024260 21024278 GTCGAAGTTCCGTTTCGTC 59 21024218 21024238 GTCTTTATCCGTCCTAATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34260 FBgn0085289 FBtr0112454 3 1 1 81 3L 20708172 20708190 CAAGTGCGACTGAAATTGC 58 20708235 20710051 CTTGTGGTGCTATCTGCAC 58 NA Drosophila melanogaster 61 Ide FBgn0001247 FBtr0273273 3 1 1 80 3L 20366414 20366434 AATGAGTACTTGTACGATGCG 58 20366292 20366372 AATGGTGAAATCGATGCCG 59 NA Drosophila melanogaster 61 CG32228 FBgn0052228 FBtr0074836 3 1 1 60 3L 20260933 20260954 GAGCACTCAGATGATAATGAGG 58 20260975 20260993 CCGCTGAGTAGATACTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074851,FBtr0074850 1 2 3 119 3L 20228694 20228712 GCCATGCTCATGAATTCCA 58 20228526 20228611 ATCATCGCTGTCTTCCTCC 59 NA Drosophila melanogaster 61 fln FBgn0005633 FBtr0074910 1 1 1 93 3L 19983177 19983258 GGAATATCAGTGGCAGTGAC 58 19983103 19983124 TTATAAGTTCTTATCGAGGCCG 57 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302334 3 1 6 157 3L 19685466 19685828 GCTCGAGAATGTACCAAGTC 58 19685022 19685040 TCATCCGTCTTCAGGATGG 58 NA InUTR Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044,FBtr0290043 2 3 3 115 3L 19486753 19487450 CTACAGTCCCGATTCGGTC 59 19486656 19486675 TATTCCACTCCATGTCGGTG 59 NA Drosophila melanogaster 61 CG14077 FBgn0036830 FBtr0299821 3 1 1 82 3L 18902993 18903089 GAATATGAGGATCGAACACTTTCC 59 18902934 18902952 GATCCATTTGGTTGTCGCC 59 NA InUTR Drosophila melanogaster 61 bora FBgn0259791 FBtr0075108 1 1 1 92 3L 18616142 18616160 TTACACCTGCCACTGATCG 59 18616274 18616292 GACCTCGTCAATGTTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 rpr FBgn0011706 FBtr0075120 1 1 1 60 3L 18391230 18391248 TCACAGTGGAGATTCCTGG 58 18391188 18391206 GACATGAAGTGTACTGGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7430 FBgn0036762 FBtr0075140 2 1 1 88 3L 17842040 17842058 TCATTAACGAGGCTGTGCT 59 17842110 17842191 CTCGGAACATGTTGGATGC 59 NA Drosophila melanogaster 61 Grd FBgn0001134 FBtr0075139 2 1 1 88 3L 17830730 17830847 AACAAATCATCCGTCGGAG 58 17830899 17830917 GACCGTACACCTGAATCAG 57 NA Drosophila melanogaster 61 CG13026 FBgn0036656 FBtr0299542 2 1 1 78 3L 16719154 16719233 ACCCTCATCATGAAGAGCC 59 16719094 16719112 CAAAGCTGGCATGAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9692 FBgn0036654 FBtr0075317 1 1 1 62 3L 16698119 16698137 GAAATCCCAGTACACCCGA 59 16698226 16698244 GGCTCTAGTGCTGTAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4229 FBgn0036639 FBtr0075392 3 1 1 77 3L 16549956 16549975 CAAGACGCAAATCGTAAACC 58 16550202 16550220 GAGAGGGTAAGGACACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 3 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 comm2 FBgn0041160 FBtr0075580 3 1 1 187 3L 15692459 15692477 CAATCGGGTGATTCTGGAC 58 15691549 15692309 CATTGTTGCGATAATTGCGT 58 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 2 1 3 127 3L 15516168 15516186 CATTTGCAAGACCTGAGGG 58 15515672 15516079 TTAAATGGTCTGTCCAGAGCT 59 NA Drosophila melanogaster 61 CG33259 FBgn0036495 FBtr0075615 2 1 1 60 3L 15400959 15400979 GGGAAACATTCACTCTTGTGG 59 15400999 15401019 TTCTCAGCAAAGCACTTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta2 FBgn0023174 FBtr0075629 3 1 1 134 3L 14993472 14993757 AACATATACTGCTGTGGAGCT 59 14993852 14993871 CTTCAACATCGTATTGGCGG 59 NA Drosophila melanogaster 61 Prosbeta2 FBgn0023174 FBtr0075629 1 1 1 133 3L 14993472 14993757 AACATATACTGCTGTGGAGCT 59 14993852 14993870 TTCAACATCGTATTGGCGG 58 NA Drosophila melanogaster 61 Brd FBgn0000216 FBtr0075621 1 1 1 80 3L 14965980 14965998 CTGAAGAACCACTCCATGC 58 14966042 14966060 CAATTGCTCGTTCTGGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 1 2 2 89 3L 13501638 13502161 TCCCATTGCTCAAATAGTCG 58 13502213 13502231 GCGATACCTATACCACCAC 57 NA Drosophila melanogaster 61 CG10133 FBgn0036366 FBtr0075825 3 1 1 60 3L 13442734 13442752 TACCGCGAGGAATTTACCC 59 13442692 13442715 ATGTAGAACTGACCACTATCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10191 FBgn0036354 FBtr0075863 2 1 1 75 3L 13382108 13382126 GACAAATTTGCTACCGGTG 57 13381984 13382002 GCGAAGCATCATAGGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10191 FBgn0036354 FBtr0075863 1 1 1 74 3L 13382107 13382125 ACAAATTTGCTACCGGTGG 58 13381984 13382002 GCGAAGCATCATAGGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 SNCF FBgn0036349 FBtr0075840 2 1 1 85 3L 13371894 13371912 AACTCTTCTTGTACCGCCA 59 13371961 13371979 GGTAAGCACTATCTTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17300 FBgn0036345 FBtr0075892 2 1 1 80 3L 13080162 13080259 CGAGATTAGCCTTACGTCCT 59 13080101 13080120 GGAGCCTACTTAGTCCTTGG 59 NA Drosophila melanogaster 61 SRm160 FBgn0036340 FBtr0075883 1 1 1 91 3L 13031676 13031694 TTTCAGCGATCCAATTCGC 59 13031749 13031837 TTGTTGAAGCGTCTTGGAG 58 NA Drosophila melanogaster 61 MICAL-like FBgn0036333 FBtr0075898 2 1 1 60 3L 13008079 13008099 GCCATAATACACCACTTTCGG 59 13008039 13008059 TATCGTCTGCTTTAAGTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075901 3 1 2 107 3L 12959939 12959957 CTGGACTTAGCATCTGCCT 59 12957721 12959870 TTTGCCACTAGCTAAAGTGAC 58 NA Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 2 1 1 92 3L 12768758 12768778 CGATTAGTCCTACACAAAGCC 58 12768632 12768704 CTCTTCCTTCGTTCTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Tsf2 FBgn0036299 FBtr0075966 2 1 1 80 3L 12525862 12525948 AACTCCGATAAACTTTGTACGC 59 12525803 12525822 GTAGCCGAAGTAGGGATCTG 59 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 1 2 3 80 3L 12493241 12493324 CCTAAGATACTTGATCGATATTGGC 59 12493185 12493208 ATATCCAGATTCTCTACGAGATGG 59 NA Drosophila melanogaster 61 l(3)j2D3 FBgn0011335 FBtr0075991 1 1 1 80 3L 12110258 12110352 CGCGAAAGTATAGAATAGAAGC 57 12110390 12110411 CTTGAAGCTTATGAAAGTGCTC 58 NA Drosophila melanogaster 61 CG14127 FBgn0036219 FBtr0076037 2 1 1 84 3L 11875045 11875144 CAACAGGAAGCTCGTATGC 59 11875191 11875210 CTTCTTTCGAATGTGCTCCG 59 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 3 4 4 93 3L 11873251 11873329 GCATCACAGTGTGATAATTCCA 59 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 CG32091 FBgn0052091 FBtr0076106 2 1 1 81 3L 11633283 11633760 GATTTCGGGTTTCAGACGC 59 11633803 11633823 GTCGTCCTGAGTGATATAGCA 59 NA Drosophila melanogaster 61 CG33270 FBgn0053270 FBtr0076149 3 1 1 60 3L 11571437 11571455 AAGAGGAAGTGCAAGAACC 57 11571395 11571413 TCCTGTGGGTCACAATCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6140 FBgn0036162 FBtr0076177 1 1 1 62 3L 11457202 11457220 GATCGCATCCAATGTGCTC 59 11457103 11457121 CAGTTGAAGCTGATGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32073 FBgn0052073 FBtr0076230 3 1 1 90 3L 11100386 11100404 CGTTGATTGCACCACATCC 59 11100314 11100333 AGATCCACTGCTACTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 2 3 3 97 3L 11051888 11051907 GAATGACTATGTGGCCAAGC 59 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 1 4 4 114 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865344 10865362 GCTTGATATCCGGATTGGG 58 NA Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 3 2 2 139 3L 10631787 10632319 CACCCTAACATTGGTCGTC 58 10632422 10632440 GCTTGAGTATCAGCTTCCC 58 NA Drosophila melanogaster 61 Or67d FBgn0036080 FBtr0076297 3 1 1 80 3L 10266623 10266768 ACGAGGATATCTATAGAGAATACGG 59 10266806 10266824 TCCATGTAATGCGGATTCG 58 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 3 2 4 178 3L 9707710 9708848 TTTGTGCGAAGAAGCAGTG 59 9708990 9709008 TCTTCTCAGTCGATGTGGT 58 NA DesignRelaxed Drosophila melanogaster 61 SH3PX1 FBgn0040475 FBtr0076413 2 1 1 129 3L 9705243 9706042 CAACATATCCGTGTCACGTC 59 9705133 9705151 GAATTGCTCCTCATAGCGG 58 NA Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076396 2 1 2 224 3L 9701357 9701375 CTACGCTCCAGTAAAGCCT 59 9701563 9701650 TTGTTTGGGATTGCTTCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 3 2 2 83 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677483 9677504 AGAAGAGATACGAGACACTCTC 58 NA Drosophila melanogaster 61 CG16717 FBgn0036028 FBtr0076392 3 1 1 108 3L 9672496 9672514 AAACAATCAGAAGTCGGCG 58 9673018 9673037 CTGGCTAAGTGGATGTACTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3335 FBgn0036018 FBtr0076383 1 1 1 100 3L 9617465 9617536 CCAAGCATATCACCGAAGAC 58 9617599 9617617 TTGCCGAAACTTTCCATCG 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 2 3 6 85 3L 9338852 9338937 GAATCGAGGGAAGTCTGCT 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 Srp68 FBgn0035947 FBtr0076517 3 1 1 92 3L 8969418 8969437 CGGCGTACAATATCTACTGG 58 8969492 8969568 TTGAGCTTAGCCTGTTCCA 59 NA Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273348,FBtr0273349 2 2 2 132 3L 8638385 8638866 GGAAACCAAGTACTTTCATGAC 57 8638274 8638292 CTTGTAACGATTCGTGCCT 58 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 2 2 2 81 3L 8430189 8430208 ACGATGTGGAAGGTAATGTC 57 8430061 8430148 CCTAGATTACCTCTTTGGTTCG 58 NA Drosophila melanogaster 61 CG8111 FBgn0035825 FBtr0076770 2 1 1 88 3L 7907091 7907170 TTCGTCTGCTGTTTGTACG 58 7907021 7907040 AAATGCGATGAGTAGGTTGC 59 NA Drosophila melanogaster 61 sec63 FBgn0035771 FBtr0076847 1 1 1 80 3L 7356801 7356821 GAGATCCAGCTGAAGTTTACC 58 7356861 7356963 CAAATACGAGTCCGATCTCAG 58 NA Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0076940 2 1 2 105 3L 6944443 6944461 GATCCAATAACACCGGCAC 59 6944292 6944374 GGATTGATGGTCTGGTTGG 58 NA Drosophila melanogaster 61 CG32398 FBgn0052398 FBtr0076988 3 1 1 66 3L 6362005 6362023 CATAGAAATGCCGACCTGG 58 6361957 6361976 CATAGATTGGGAGCCGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32409 FBgn0052409 FBtr0077030 1 1 1 112 3L 5892840 5892918 GAATTGAGGGACAACAAAGAGG 59 5892991 5893009 ACAATGCTCTCGTCTACCC 59 NA Drosophila melanogaster 61 Pole2 FBgn0035644 FBtr0077081 1 1 1 125 3L 5889710 5889785 GTGTGCTCAAGGTTGATGG 59 5889603 5889621 GTCCGGCTGAGTACTTCAG 59 NA Drosophila melanogaster 61 CHMP2B FBgn0035589 FBtr0077166 1 1 1 60 3L 5133368 5133386 AGATCTCCGGCAAGATGTC 59 5133410 5133428 CCACTCGTCTCAAAGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 axo FBgn0261546 FBtr0302646 3 1 1 80 3L 4643720 4644056 TAATGTCAGCATGATTCCCG 58 4643659 4643677 TCATCGTACACGAATCTCG 57 NA Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302 3 1 2 139 3L 4447460 4447478 AGCAGCAGATTGTCCAGAG 59 4447577 4447909 GATGGTTTCGTTATAGACTGGAC 59 NA Drosophila melanogaster 61 Fie FBgn0026592 FBtr0073157 1 1 1 80 3L 3894047 3894067 GTCTACGCACCATGAATAAGC 59 3894109 3894181 AACGATAGGGTATGGCTCC 58 NA Drosophila melanogaster 61 dro6 FBgn0052268 FBtr0073080 3 1 1 62 3L 3336304 3336322 TGATGATGGTCATCCTGGG 58 3336260 3336279 CTCTGTACCTTCCGGAAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 1 1 1 91 3L 3318588 3318708 TAGCCATGGTCTCTAAGGC 58 3318515 3318533 GAAGGCGTGATACGAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14967 FBgn0035420 FBtr0302302 3 1 1 80 3L 3218482 3218556 GGATTCTCGGTGCAAATCG 59 3218420 3218440 ATAAATGGAGAGCAGCTTGGT 59 NA Drosophila melanogaster 61 CG14957 FBgn0035412 FBtr0073038 2 1 1 111 3L 3187595 3187676 TTGTATCACTGCTCCTGGT 58 3187748 3187769 GATTTATCCACATTCTGACACG 57 NA Drosophila melanogaster 61 rasp FBgn0024194 FBtr0073029 2 1 1 60 3L 3162798 3162817 GGATCTTACGAGATACAGCC 57 3162839 3162858 CAGACAGGGAAAGTACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16753 FBgn0035393 FBtr0072990 1 1 1 60 3L 3055354 3055372 CGTAAGAAACGCAAGGAGG 59 3055393 3055414 TTAGATCTCCGACAACTTTGGT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn FBgn0010905 FBtr0072961 2 1 1 87 3L 2512850 2512870 GCAGGCTTAGAGAAACTAGGA 59 2512722 2512801 GATCGTTGACCTGAATGCG 59 NA Drosophila melanogaster 61 CG13806 FBgn0035325 FBtr0072879 2 1 1 189 3L 2266520 2266610 CTAGTGAGCGTGTTACTGC 58 2266763 2266781 ATTCCACGGGAATGTTCAC 58 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 3 2 2 113 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965413 1965432 AGATATTGACGCACCAACTC 58 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 1 2 2 80 3L 1873975 1874052 TGTCAAGGAAGTTACATACCG 57 1873915 1873934 GCATTGTTTAGATTTGCGGA 57 NA Drosophila melanogaster 61 cue FBgn0011204 FBtr0072706 2 1 1 90 3L 1504451 1504469 ACTCCACGGAGATATGCTC 58 1504312 1504397 TCCTCACAGATGCTGTGAC 59 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 3 3 3 74 3L 1299143 1299161 ACTGTCTACGGCTTCATGG 59 1299199 1299335 GCTCTTGTAGCTGACTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG9129 FBgn0035196 FBtr0072653 1 1 1 60 3L 1250896 1250916 AGAAACGCTCTAATCTTGCTG 59 1250937 1250956 AGATCGTCCACCATGAACTC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysX FBgn0004431 FBtr0072637 3 1 1 62 3L 1194998 1195016 GATGTGAGTTGCAACGCTC 59 1194954 1194973 CTTTAGGGCACATCTTACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trh FBgn0035187 FBtr0072638 2 1 1 92 3L 1191110 1191187 CAAGGAGCAAATGAGAGCT 57 1191036 1191054 TTCGACAGGACTTCAACAC 57 NA Drosophila melanogaster 61 snoRNA:Me28S-G1083b FBgn0082934 FBtr0113532 1 1 1 60 2R 20072618 20072637 GATGAGCATTAACTTTCGCC 57 20072658 20072678 CAATCTCGCATTCAACAAGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347b FBgn0083053 FBtr0113514 3 1 1 77 2R 14030549 14030570 ACGACTAAGATTCATAGTTGCC 58 14030607 14030626 TGTTATGCAGATGGTATGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33426 FBgn0053426 FBtr0086418 1 1 1 60 2R 15626793 15626811 ATACATCGGTTCTCGTCCG 59 15626751 15626769 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:H:48F FBgn0011878 FBtr0087900 1 1 1 60 2R 8223930 8223948 TCGTCTAGTGGTTAGGACC 57 8223972 8223990 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 2 2 2 148 2R 20856570 20856655 CTAACACAAACTCGCGTCAG 59 20856441 20856459 CTTACGCTTTCCGAATCCG 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0100299 2 1 3 155 2R 20758659 20758677 CATCAAACAGAACGCCCAG 59 20758847 20758867 AGCAAGTGTATACTGGATGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Eap FBgn0035063 FBtr0072374 2 1 1 60 2R 20668848 20668866 TCGAAACCACAAAGGACGA 59 20668890 20668908 ATAGACTTGACCGTGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4806 FBgn0260456 FBtr0072332 2 1 1 200 2R 20554636 20554714 TTGAATCGGTTTGTTTCCCG 59 20554455 20554473 ATGCGTGTCGAAGGATAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4707 FBgn0035036 FBtr0072338 2 1 1 80 2R 20493020 20493040 AGTATCATGACGTTTCCAAGC 58 20492897 20492980 CCGTAGGAATCTTCTTGTTGC 59 NA Drosophila melanogaster 61 CG3483 FBgn0035005 FBtr0072293 3 1 1 60 2R 20333340 20333360 CAAGAGGTAATCTGTGCTGTG 59 20333382 20333400 CCTTGAACTCATCGTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 2 6 6 81 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287801 20287822 CAGATTTCTGTTGATGAAAGCG 58 NA Drosophila melanogaster 61 bs FBgn0004101 FBtr0072271 3 1 2 193 2R 20235799 20235817 ACGTGTACACATTTGCCAC 59 20235974 20262946 TCGGTCATCTTTCGAGTCC 59 NA Drosophila melanogaster 61 CG3173 FBgn0034964 FBtr0072168 3 1 1 117 2R 19927935 19928010 GAGTTGCAGATAATAACCATGG 57 19928087 19928106 GCTGAGTGATTAGAATCGCA 58 NA Drosophila melanogaster 61 CG3860 FBgn0034951 FBtr0072201 1 1 1 80 2R 19880497 19880516 TCACTTGACATTCCCGACTC 59 19880367 19880456 CGTAAACTGGTAGTACTCGCT 59 NA Drosophila melanogaster 61 CG16787 FBgn0034940 FBtr0072207 3 1 1 60 2R 19844311 19844329 ACTACGTCAAACAGATCGC 58 19844269 19844288 TTCACGTAGGCGTACTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fzr2 FBgn0034937 FBtr0072146 3 1 1 60 2R 19838359 19838377 AGCTCTGTGTACTCATGCC 59 19838400 19838419 CCAAGGAAGTGATGTTCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 2 2 2 63 2R 19777599 19777617 CTACACGTTCAACTCGTCG 58 19777554 19777572 TATGAAGAAGGCTCCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bgcn FBgn0004581 FBtr0072232 2 1 1 85 2R 19741947 19742026 CATGTTCTCGGGACATCCA 59 19741880 19741898 TAAAGACGTTCACGTTGCG 59 NA Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072014 2 1 4 109 2R 19274342 19274540 GTGCCACAGACTTTGAAGAG 59 19274611 19274630 GCTGATGTTTCTTGTGTCGT 59 NA Drosophila melanogaster 61 CG3124 FBgn0034840 FBtr0072046 3 1 1 179 2R 19170824 19170842 AGTCAGCCTATGCAGAGTC 58 19170587 19170682 TATCGATGGTGCGTTTAGAC 57 NA Drosophila melanogaster 61 CG42640 FBgn0261363 FBtr0302290 3 1 1 130 2R 18954179 18954197 AGCTGCAGAACTTCTTGTG 58 18954291 18954371 CGTCTGGTCAACCTTATCC 57 NA Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 2 1 1 65 2R 18825682 18826030 GGGAGTGTTCCTTCCTCAC 59 18826059 18826077 TGATGATTGCAGCCAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0113365,FBtr0071921 1 2 2 99 2R 18591799 18591817 CATGGAGGAAGAGACGAGG 59 18591648 18591666 AGCCATATTGAGTCGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 2 2 2 83 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361780 18361798 GTACACTTTGGGCATCTGC 59 NA Drosophila melanogaster 61 CG10496 FBgn0034631 FBtr0071701 3 1 1 199 2R 17389045 17389140 CGAAGAAATCCACATGCCG 59 17388864 17388882 AGCCGGGATAAGAGAAGTG 58 NA InUTR Drosophila melanogaster 61 CG30391 FBgn0050391 FBtr0071621 1 1 1 60 2R 17153487 17153506 GCTACAAGATCACCATGCAG 59 17153446 17153467 TCGATATCATAGATCTGCGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4302 FBgn0027073 FBtr0071625 1 1 1 86 2R 17101863 17101939 GCCAGAAATTAAGGAGATGACC 59 17101798 17101816 ACATTGACCATTCGCAGGA 59 NA Drosophila melanogaster 61 CG9350 FBgn0034576 FBtr0071530 2 1 1 106 2R 16912654 16912852 AAATTTCGGCAGCAAACCA 59 16912922 16912940 GATACCGCGTACTTGTTGG 58 NA InUTR Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 3 1 1 113 2R 16768653 16769708 ATGATTTCGATCAGGACGG 57 16769785 16769803 TTACCTTGTCGGCAATCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33786 FBgn0061361 FBtr0091787 2 1 1 62 2R 16531121 16531139 ATATCGAAGATCAGGCGCA 59 16531002 16531095 GTGATCCACCTCCTTGAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Nnf1a FBgn0034523 FBtr0086257 2 1 1 82 2R 16474221 16474316 AAGAAATGGAACGTGAACACTG 59 16474160 16474178 AATTCCACGCTGAAGTCCA 59 NA Drosophila melanogaster 61 CG13424 FBgn0034520 FBtr0086218 2 1 1 94 2R 16445656 16445674 GGAAACGGAGTTCGAAAGG 58 16445730 16445906 AGATCTTGATCTGCGTTTCTG 58 NA Drosophila melanogaster 61 CG9864 FBgn0034490 FBtr0086320 3 1 1 96 2R 16136032 16136053 CTGTACGGCATCATTAACTGTG 59 16135892 16135977 ACTGATCGATTGTGTTCTCGT 59 NA Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 3 1 1 60 2R 15586699 15586779 TAAGCGAACTAGTAGCGGG 59 15586657 15586676 TGTTGAATTTGCTTGTAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Oseg6 FBgn0034452 FBtr0086501 1 1 1 80 2R 15375303 15375321 AACTGGGCAATCATTTGCT 58 15375187 15375262 GAATGATATGTTCGGGAAACTG 57 NA Drosophila melanogaster 61 CG10051 FBgn0034437 FBtr0086521 1 1 1 80 2R 15254196 15254278 AGAATGGAAAGACTCTGCTC 57 15254321 15254339 TTAGACAGCTGGGTAAGGT 57 NA Drosophila melanogaster 61 FK506-bp2 FBgn0013954 FBtr0086515 3 1 1 117 2R 15177695 15177713 TGGGCGTACAAGTAGTTCC 59 15177954 15178033 GACGAATCGAACTTGGTGC 59 NA Drosophila melanogaster 61 GstE2 FBgn0063498 FBtr0086670 2 1 1 60 2R 14287108 14287128 ACTTGGACTACGAATACAAGG 57 14287147 14287168 AACGCATCCTTAAAGTGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 1 4 4 126 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020605 14021381 AACTTTGGCCATCCTTGGT 59 NA Drosophila melanogaster 61 PpY-55A FBgn0003140 FBtr0086817 3 1 1 60 2R 13843273 13843292 CTTCGACTTGCAACTTATGG 57 13843232 13843252 AAAGAACTCGTATCCATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 proPO-A1 FBgn0261362 FBtr0302291 3 1 1 86 2R 13775643 13775661 GGATGAGCGTAATCAGGCT 59 13775418 13775593 CCAGGCACCAAATCAACTG 59 NA Drosophila melanogaster 61 CG30106 FBgn0050106 FBtr0086893 1 1 1 98 2R 13538597 13538671 TAACCTGAAGCATCTCGGC 59 13538517 13538535 AACAGGACCATGGACTTGG 59 NA Drosophila melanogaster 61 CG14483 FBgn0034248 FBtr0086902 1 1 1 60 2R 13473491 13473509 GCATGTACATGGCCTTTCC 59 13473449 13473467 TCAAAGTATTCCGGCTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18467 FBgn0034218 FBtr0086918 1 1 1 80 2R 13329054 13329072 ATCGGATGATGAGCTTCCA 58 13329113 13329189 CTTGATATCCCTCTGTAACCAG 57 NA Drosophila melanogaster 61 Acp54A1 FBgn0083936 FBtr0110768 2 1 1 60 2R 13021037 13021055 AACCGACATTCCTGTTCGA 59 13021079 13021097 AGTCAAATGCCAAGCACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Arp53D FBgn0011743 FBtr0087023 3 1 1 60 2R 12661942 12661960 TAGTAATTCACACCACGCC 57 12661983 12662002 TCCAGCCTTACATACTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5348 FBgn0034156 FBtr0087022 2 1 1 86 2R 12654676 12654757 CAATGTTTACTATAGTCCTGCTCTG 59 12654800 12654819 AATGCCATCAGGGTAACTCC 59 NA Drosophila melanogaster 61 CG42392 FBgn0259738 FBtr0300043 3 1 1 60 2R 12653057 12653075 AACAATTCTGGTGCTGTCC 58 12653015 12653033 GCTATCCAACATGGATCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 2 4 4 92 2R 12416662 12416685 GCACTGATCTGTATAATACTTCGG 59 12416735 12416872 AGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 CG15710 FBgn0034120 FBtr0087169 2 1 1 60 2R 12235604 12235623 CCATCAATGAATCGCACCTG 59 12235563 12235581 GATACTCCAGATCCGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30321 FBgn0050321 FBtr0087286 2 1 1 71 2R 11680952 11680971 CGCATAGCACAGGATAACAC 59 11681004 11681023 TTCCAGTTTCAGGTCCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30089 FBgn0050089 FBtr0087285 1 1 1 80 2R 11620408 11620426 CTAACGGCTAATGTTCCCG 58 11620470 11622610 GAATGGATCGCAATTCTGC 57 NA Drosophila melanogaster 61 CG8192 FBgn0034030 FBtr0087354 2 1 1 89 2R 11433020 11433038 GGAGGAAGAAGTGGAGGAG 58 11432885 11432971 GCATAGTATCCAGAGTTTCTGTC 58 NA Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087385 1 1 3 83 2R 11270797 11270921 GATCATTGATCGCTACCATGTC 59 11270965 11270983 ATTGCTTGCAAATCCCAGC 59 NA Drosophila melanogaster 61 dup FBgn0000996 FBtr0087387 2 1 1 81 2R 11265923 11267076 GGAGGTGCTTATAAGCCCT 58 11265860 11265880 CATAAGCTCATGTTTGTCCGG 59 NA Drosophila melanogaster 61 Dro FBgn0010388 FBtr0087436 2 1 1 86 2R 10633638 10633656 GGATCACCTGACTCAAGCT 59 10633706 10633724 TGATCGGATGACTTCTCCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087557 2 1 2 81 2R 10258229 10258304 CATTCAAGCAAGTTGCCGT 59 10258166 10258186 AACTTTCGCTTGGATCAATCG 59 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 1 5 5 149 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG4679 FBgn0033816 FBtr0087759 2 1 1 111 2R 9126589 9126607 GATACCCATGTCCAATGCG 58 9126442 9126516 CTCTTGGTGCATAAACAGCTC 59 NA Drosophila melanogaster 61 CG30053 FBgn0050053 FBtr0087873 2 1 1 88 2R 8577061 8577079 TCAAAGTGTCCAAGAGCAG 57 8576935 8577011 CTATTCCCTCCAAACCTTCAC 58 NA Drosophila melanogaster 61 CG17760 FBgn0033756 FBtr0110824 2 1 1 81 2R 8514601 8514619 ATTCATGGCCATACAGTCG 57 8514663 8514750 GGCAAGTTTACTATGCTCCT 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087832,FBtr0087830,FBtr0087836,FBtr0087835 2 8 8 113 2R 8503907 8504050 CTGCTACTACTGGGCACTG 59 8504127 8504145 AACCAGCTTGATGTACCCA 59 NA Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 1 2 2 80 2R 8447316 8447401 AGTGTACTATTCCGAGAACGA 58 8447443 8447461 CGCAACTCGGTAAGAACTG 59 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917,FBtr0087916 1 3 3 90 2R 8275437 8275818 AAGTATAGGTCGCTATCATCAC 57 8275869 8275887 GGGATAGGGAATGTGATGG 57 NA Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987,FBtr0087988 2 2 2 168 2R 8064066 8064084 CAACCACCTGTTGCTTCAG 59 8064216 8064293 TGTTCCGAATGCCATTTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Prp8 FBgn0033688 FBtr0088016 1 1 1 80 2R 8047806 8047883 CGGAAATGCTTTCCATTTGTG 59 8047746 8047767 TTTAGCCGATACTGAACATGAG 58 NA Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 1 2 2 80 2R 7327362 7327483 GGTCTCAATGAGCTCAAATCC 59 7327522 7327543 ATTGAGGATCAAATTGCCAAGG 59 NA Drosophila melanogaster 61 epsilonTry FBgn0010425 FBtr0088160 2 1 1 60 2R 7233018 7233036 GAGATCATCGATGTGTCGC 58 7232976 7232997 CCTTGATCTTCTTTCCGTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13215 FBgn0033592 FBtr0088192 3 1 1 60 2R 7127462 7127481 GGTTTAAGCCTGATCCAAGC 59 7127421 7127440 AAACGAATCCTGGATTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0088196 3 2 3 118 2R 7116999 7117017 CAGAAGGACTTCTACCCGC 59 7116522 7116918 GTACTCTGTGCTCCTGTCAG 59 NA Drosophila melanogaster 61 StIP FBgn0033540 FBtr0088212 2 1 1 80 2R 6533465 6533536 ATGGATCCAAAGTTTCAAGGC 59 6533578 6533596 CCTCACAGTGTTTACTCGC 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG1381 FBgn0033485 FBtr0088425 1 1 1 80 2R 5986697 5986717 GAATCGTGTTATGCAGATTGG 57 5986577 5986656 AATCGCTTGGATAGCTTGTG 58 NA Drosophila melanogaster 61 CG18446 FBgn0033458 FBtr0088376 3 1 1 185 2R 5760508 5760527 AAAGGAGATATGGAGCACAC 57 5760672 5760755 CATAGATCCGGATTGAAGTAGG 58 NA Drosophila melanogaster 61 CG18446 FBgn0033458 FBtr0088376 2 1 1 183 2R 5760510 5760528 AGGAGATATGGAGCACACG 59 5760672 5760755 CATAGATCCGGATTGAAGTAGG 58 NA Drosophila melanogaster 61 CG30010 FBgn0050010 FBtr0088374 3 1 1 80 2R 5751457 5751529 CATGAGGGAATGCTCTTCCT 59 5751569 5751590 GAACTTGAGGAAATCCTTCTCC 58 NA InUTR Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088494 3 1 2 67 2R 5700261 5700279 AGTTAGCATTCAGAGGGCC 59 5700153 5700233 GAAGTTCTTCAAGGAAGTTTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG30339 FBgn0050339 FBtr0088534 1 1 1 80 2R 5490112 5490130 TTATGCCTGAGCTCTTCGG 59 5489988 5490070 GCAATCGAACATAGGTTCCAG 59 NA Drosophila melanogaster 61 Or45b FBgn0033422 FBtr0088519 2 1 1 80 2R 5447865 5447945 AATAAGAGATCCCTCGCTTAGG 59 5447984 5448004 TCTATCTCATTGTGGCGATCC 59 NA Drosophila melanogaster 61 prel FBgn0033413 FBtr0300293 3 1 1 105 2R 5311870 5311888 CTGAATCAACGTGTGCCAG 59 5311957 5312053 TGTCCCTGATCTTTGCGAG 59 NA InUTR Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 2 2 2 107 2R 5175034 5175053 ATGGACTCAGAACCACTGTC 59 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 2 3 3 106 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021270 5021359 CGATTATCGGTCGCTTGAC 58 NA Drosophila melanogaster 61 lin FBgn0002552 FBtr0088651 2 1 1 143 2R 4802504 4802581 GGTTTGTAGACCATTTGCAGG 59 4802686 4802704 CTGTTCGTTTGATGCGGAG 59 NA InUTR Drosophila melanogaster 61 CG8272 FBgn0033337 FBtr0088686 1 1 1 60 2R 4778760 4778779 TAGATACGATGATCTGCCGC 59 4778588 4778606 CGAGTAGCCGAGATAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42615 FBgn0261267 FBtr0302222 3 1 1 60 2R 4625023 4625041 CCCTGTCCAATCTGTATCC 57 4625065 4625083 TGCCAGAGTAGGAATGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766,FBtr0088765 1 2 2 60 2R 4257225 4257243 CTACAGCAGTCAGTCTTCC 57 4257183 4257201 CGATACCTGATCGCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mlh1 FBgn0011659 FBtr0088790 2 1 1 98 2R 4058583 4058601 GTTCATCAACCAGCGACTG 59 4058719 4058738 TATACGAAAGGATGGTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34431 FBgn0085460 FBtr0112732 1 1 1 60 2R 3833366 3833387 CAACACGATTCAACATATCCTG 57 3833407 3833426 TGGTTCTGATTCTCTTTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088933 2 1 3 77 2R 3629422 3645554 TCGTACAATGCAAAGTGCG 59 3629363 3629381 GACGTCCATTCTGTTGCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779,FBtr0088939 3 3 5 81 2R 3575701 3575719 GACGGAGAATCGTGTTCTG 58 3574330 3574415 ATGGCATTCGATCTTGGTG 58 NA Drosophila melanogaster 61 CG1603 FBgn0033185 FBtr0088979 1 1 1 98 2R 3403398 3403480 ATAGCAAGGATATCCAGTACGA 58 3403321 3403339 GAAGTTCCAAAGAGCTGCC 59 NA Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 3 2 2 80 2R 3383083 3383102 ATTTGCTGGACCTGTATCCA 59 3382958 3383041 GTGGAGTGAATCTTTCCGTC 58 NA Drosophila melanogaster 61 CG1701 FBgn0033167 FBtr0113049 1 1 1 60 2R 3296501 3296519 TCGTGGAAGACGAGTTGTC 59 3296459 3296480 ATTTCCCGTTCCTTATACTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 1 2 2 80 2R 3278702 3278722 AGTTACTCGTCGTAGATGCTG 59 3278580 3278660 CGGATGCAAACGATGTCAG 59 NA Drosophila melanogaster 61 pgant3 FBgn0027558 FBtr0089061 3 1 1 80 2R 2945931 2945950 ACCACTTCGAATGTAATGCT 57 2945813 2945891 TATTTGCTGAGTATCCATGTCG 58 NA Drosophila melanogaster 61 lbm FBgn0016032 FBtr0089033 3 1 1 81 2R 2939110 2939190 GCCTTCGAGTTAATCTGCT 57 2939235 2939253 ACTAGAACTCCATCCGTCG 58 NA Drosophila melanogaster 61 CG12842 FBgn0033131 FBtr0089029 2 1 1 83 2R 2926749 2926953 ATTGGAGGCTTATGGCCTC 59 2926999 2927018 ATTATTGGCCTCACTCAGGG 59 NA Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 1 2 2 61 2R 2886861 2886879 GTGGGATGAGAACAATGCC 58 2886904 2886994 AAGAGAAGGCCAACTGGAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG9430 FBgn0033097 FBtr0086138 3 1 1 60 2R 2606402 2606420 ATCATGATGGCCCATACCC 59 2606360 2606378 CGATCGAGAAGACGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3270 FBgn0033093 FBtr0086123 3 1 1 130 2R 2581043 2581062 AGTCCTGATAATAGGTGGCG 59 2581155 2581482 TAGATGCGCTGGTGTAACC 59 NA Drosophila melanogaster 61 Tsp42A FBgn0033042 FBtr0086045 3 1 1 60 2R 1683050 1683068 GTCGGAGTGATCTTTCTGC 58 1683092 1683110 GAAACATGACCGCCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4:39B FBgn0003930 FBtr0081489 1 1 1 99 2L 21215150 21215168 AGTGGCAATACCGTAACCA 59 21215069 21215087 TGGACGGTATTTCACGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 3 3 3 96 2L 22959942 22959963 TAATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111249,FBtr0111247,FBtr0111245,FBtr0111246 2 6 6 135 2L 22742091 22742164 ATAATGATCATGGCGGGTG 57 22742263 22742281 CATTCTCAACGTAGGTGGC 58 NA Drosophila melanogaster 61 CG40006 FBgn0058006 FBtr0111230 1 1 1 80 2L 22536609 22568670 TTTGTCATTCAACCGGAATCC 59 22536549 22536567 GCTCAGGTCCTTAAAGTGC 58 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 2 3 3 110 2L 22473764 22473782 AGCATGATCACTGAAGACC 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 3 2 2 145 2L 22239990 22240008 CCCAGGTGAAGTTAATGGC 58 22240183 22240201 GCAATCCTACTCGCTTTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 2 2 2 102 2L 22168195 22168213 AATGCCTCTCAATCAGGGT 58 22168058 22168131 TATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602,FBtr0081483,FBtr0081484 3 3 3 81 2L 21281325 21281401 GAATCCGCAGAAACCTCAG 58 21281444 21281464 TTGATTTAACCTCATGTCCGC 59 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404 1 1 2 137 2L 20645740 20645758 TTTACACTCGACGGACGAC 59 20645349 20645422 TTTCAAACGGTACCTGCCA 59 NA InUTR Drosophila melanogaster 61 CG10949 FBgn0032858 FBtr0081367 2 1 1 81 2L 20416213 20416231 AGTCTCCAAGAACCTAGCA 57 20416093 20416168 GTAGCAAAGTTCCTCCGAC 58 NA Drosophila melanogaster 61 Rpn3 FBgn0261396 FBtr0302289 1 1 1 94 2L 19052196 19052214 GGGTAGCCTCGAAAGAGTC 59 19052333 19052351 AAGATTCCGGAAGACGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Tango6 FBgn0032728 FBtr0081133 3 1 1 85 2L 18971343 18971361 GTACCTATCAGAGACGGCT 58 18971410 18971488 AAAGAGGACCCAACTCCTG 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 1 2 2 84 2L 18837176 18837194 TAAAGGCGGGAGTTCTTGG 59 18837040 18837129 CAATAGTTGCGAACCACCTG 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 1 4 4 103 2L 18827251 18827520 AGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG10338 FBgn0032700 FBtr0081096 3 1 1 82 2L 18697687 18697707 GCTTAAGGAGAAATACTGGGA 57 18697751 18697838 GATGGATTAGCCAACCCTC 57 NA Drosophila melanogaster 61 MESR3 FBgn0032694 FBtr0081073 1 1 1 161 2L 18631766 18649607 ACCGGAAACTTAAACCCGA 59 18660313 18660331 ATGGAGAATCAGCTCGTCC 59 NA InUTR Drosophila melanogaster 61 CG31789 FBgn0051789 FBtr0081071 1 1 1 60 2L 18606093 18606112 GTCTCATCAGTTTCCCACTG 58 18606196 18606215 ATGCTAATGTACCGAATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG31785 FBgn0051785 FBtr0300025 3 1 1 85 2L 18125158 18125180 CTCACTTACGAAATAGGACTGAC 58 18124997 18125116 TGATGATGCCTGTAGTGATAGG 59 NA Drosophila melanogaster 61 Arr1 FBgn0000120 FBtr0081030 1 1 1 80 2L 18078425 18078443 CGAACAACATGATCACGCT 58 18078486 18078924 TGATTCCATCAATGGGTTCC 58 NA Drosophila melanogaster 61 CG6412 FBgn0032646 FBtr0080994 1 1 1 113 2L 17500120 17500138 ATTTCGTAGCCAGGAACGA 59 17499920 17500043 CAAAGCCAAGCTTCCACAG 59 NA Drosophila melanogaster 61 CG5050 FBgn0032637 FBtr0080981 1 1 1 86 2L 17453647 17453665 TCTCTTGTCAACTCGGTCC 59 17453714 17453892 CTCATTGTACTCCTGCAAGC 59 NA Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 2 1 1 102 2L 17182587 17183039 TAAAGTACTCCCAACCGGAG 58 17183102 17183122 ATATCCTGGTGGACATTACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Ugt36Ba FBgn0040262 FBtr0080909 3 1 1 60 2L 16795179 16795198 TTAAGGTCCTGTCCGAACTG 59 16795221 16795239 GTGTTCTCCAAATCCTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ChLD3 FBgn0032598 FBtr0080892 1 1 1 80 2L 16741826 16741845 CCATTTGGCCTGTATTTCCA 59 16741886 16741964 CAGATCGTCGAGGAATTTCAG 59 NA Drosophila melanogaster 61 Cyt-c-p FBgn0000409 FBtr0080889 1 1 1 80 2L 16719969 16722019 TGTTCAATTCGAGTCCGTG 58 16722063 16722081 CCCTTCTCAACATCACCAG 57 NA InUTR Drosophila melanogaster 61 mRpL4 FBgn0001995 FBtr0080843 3 1 1 106 2L 16328483 16328503 GATAATGTGGACATACCCACC 58 16328335 16328416 GGGAACATATGGTCTTCGTC 58 NA Drosophila melanogaster 61 CG34168 FBgn0085197 FBtr0112359 2 1 1 78 2L 16135192 16135213 ACGACTACCAAATTTCTAGGAC 58 16135068 16135086 GCACATTCCTGGATTGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 2 5 5 84 2L 15759354 15759428 TATTCGCCGAAGACTGGTG 59 15759288 15759306 AGGCTCCACGAATGAACTC 59 NA Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 1 2 2 93 2L 15117483 15117563 AAGGATAGGTGCTGGTTCC 59 15117620 15117638 AAGCATTGTTACTGGGCAC 58 NA Drosophila melanogaster 61 CG15269 FBgn0028878 FBtr0080704 1 1 1 131 2L 15110512 15112096 TCTGAAACTCTGCAGGCTC 59 15112191 15112209 AAACTCCTTGGTTCCTCGG 59 NA Drosophila melanogaster 61 yellow-c FBgn0041713 FBtr0080699 1 1 1 80 2L 15036922 15036940 AGATACTTTACTGCGCCGT 59 15036983 15037061 GCATCCACAACAATATTCGC 58 NA Nonspecific Drosophila melanogaster 61 CG18420 FBgn0028866 FBtr0080687 3 1 1 80 2L 14796075 14796161 ATACCACAATCGTTGTTCGT 58 14796014 14796033 AGGTCCTATTCACTTGATGC 57 NA Drosophila melanogaster 61 CG16865 FBgn0028919 FBtr0080540 1 1 1 80 2L 13811694 13811712 AGGAGGAGTACAACGAGGA 59 13811756 13811834 GGGTGCAATCCAGAATCAG 58 NA Drosophila melanogaster 61 CG15638 FBgn0028943 FBtr0080516 3 1 1 72 2L 13535399 13535417 TGAATGTGGATGCTGAGTG 57 13535345 13535366 CACCTAAACCGAATGATTATGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 1 2 2 169 2L 13308294 13308423 TTTACCTATGCCAGTGGCA 59 13308143 13308161 GGTCAGGTAGATCCACCAC 59 NA Drosophila melanogaster 61 CG5945 FBgn0032494 FBtr0080450 2 1 1 91 2L 13240701 13240771 GTAACGCTCTTGGATGTGG 58 13240826 13240844 TCGATATTCTTGAGGCGGA 58 NA Drosophila melanogaster 61 CG16972 FBgn0032481 FBtr0080488 1 1 1 91 2L 13202402 13202555 TCGAGATCAACGACTCACC 59 13202329 13202347 GAACTGGTCAACATTGCCA 58 NA Drosophila melanogaster 61 spict FBgn0032451 FBtr0080397 2 1 1 99 2L 12705082 12705598 CCTTCTGACAATGGGTGTG 58 12705661 12705679 GATGATAACACTCAGCGCG 59 NA Drosophila melanogaster 61 CG5780 FBgn0032446 FBtr0300273 3 1 1 100 2L 12694370 12694390 CATACCAACGGATGACATTCC 59 12694235 12694308 GTGAGGTGCCAATAGTTGG 58 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 3 1 2 99 2L 12673616 12673635 AAATGGTCGACATTGTCGTC 59 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642 3 1 2 80 2L 12614200 12622983 CAGGACCCAAATGATATCAGTC 58 12625458 12625477 GTTGTTATCATCGCAATCGG 57 NA Drosophila melanogaster 61 CG17024 FBgn0032437 FBtr0080371 1 1 1 83 2L 12454485 12454591 GGTAATCCTATGTGTTCTGTTTAGC 60 12454629 12454650 AGATTATTAATCACCGCCTCGA 59 NA Drosophila melanogaster 61 CG17217 FBgn0032419 FBtr0080341 2 1 1 82 2L 12170881 12170961 GGATCTATATCGCAAATGGTATGG 59 12171002 12171020 GTTCATCCTCGGAATTGCC 59 NA Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0110911 1 1 2 98 2L 12096637 12096707 GCCTTTAATTATGCCCAATTGG 58 12096763 12096784 CAAATTACTGCCGTAATTGTGC 59 NA Drosophila melanogaster 61 CG6770 FBgn0032400 FBtr0080306 2 1 1 60 2L 12045944 12045962 ACTTCGATGAGTACGAGCA 58 12045902 12045921 CTGTGTCCAGAGAAGATGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 esc FBgn0000588 FBtr0080325 3 1 1 193 2L 11828898 11828978 CAAATACGACACCCACGTG 59 11828359 11828741 ATACTTCATCGGGATCCGG 58 NA Drosophila melanogaster 61 CG6201 FBgn0032343 FBtr0080229 3 1 1 86 2L 11112426 11112506 TAACCACCAGATAGCACGAC 59 11112359 11112377 TTATACCCACGAAGGTCCG 58 NA Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0113035 1 1 2 117 2L 11018329 11018347 GCAGGATATGTACCAGGGA 58 11018496 11018514 AAGAGCTGTGTTATTCGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0080136,FBtr0290229 3 2 2 62 2L 10771182 10771200 CAACCAGCGCATCAATCTC 59 10771225 10771244 TTGTTTATCACCTCGGAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7299 FBgn0032282 FBtr0080130 1 1 1 60 2L 10684263 10684281 CAAATGCTGAGAGTGAGGG 58 10684221 10684239 TCCTTCTGGAAACCAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5355 FBgn0032242 FBtr0080047 1 1 1 80 2L 10411479 10411497 GACCATGTCTGCTTTACGG 58 10411350 10411436 CGATGAACATAAGCCCAGAG 58 NA Drosophila melanogaster 61 Ir31a FBgn0051718 FBtr0080015 3 1 1 95 2L 10406430 10406511 CAAGTGTTATCGACAAGGAGG 58 10406568 10406586 TTATGAATGCAGCCACTCC 57 NA Drosophila melanogaster 61 da FBgn0000413 FBtr0080008 2 1 1 82 2L 10388514 10390059 CAGTGGATATTAGGATCTATTGCTG 59 10390099 10390117 AAGCAGTTCTGGAACACCT 59 NA InUTR Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 2 2 2 84 2L 10351770 10351788 AGACCCACTATCCAGATGC 58 10350767 10351722 TGAAACCAAACCTGCACTC 58 NA Drosophila melanogaster 61 obst-B FBgn0027600 FBtr0079934 2 1 1 87 2L 10037272 10038229 CAAGCTACAAACACCTCAGC 59 10038278 10038297 GAACTTATCGCAGATGCCTG 59 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 2 2 3 117 2L 9685192 9696199 TACATCAGCCATTTCCCTCC 59 9685094 9685114 CGGATTTCAAATCGTCTTCCA 59 NA InUTR Drosophila melanogaster 61 CG3769 FBgn0032119 FBtr0079810 2 1 1 76 2L 9435662 9435680 CACAACGACTCCCAAAGAG 58 9435830 9435849 ACTTATTAATGGCCGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 FucTB FBgn0032117 FBtr0079811 2 1 1 80 2L 9430065 9430085 GATGAAACATCTTCCGATCGA 58 9429572 9430025 AAGTAATCCTTCTGCAAGCTC 58 NA Drosophila melanogaster 61 Rbsn-5 FBgn0261064 FBtr0079581 3 1 1 84 2L 8161354 8161373 AACGAAATAACATGGCAGCT 58 8161420 8161503 TGAAGATCAGACCCTTGGG 58 NA Drosophila melanogaster 61 CG8673 FBgn0031986 FBtr0079575 2 1 1 135 2L 8124614 8124635 CAAATTTCAGGAAACAGCAGTG 59 8124731 8124816 CTAGCCCGTCATCATGGAG 60 NA Drosophila melanogaster 61 CG6739 FBgn0031926 FBtr0079472 2 1 1 102 2L 7615879 7615899 AAGTGGTAACATCCCTAGGAG 58 7615960 7616130 GGACAATCAATTTGCTTATCGC 59 NA Drosophila melanogaster 61 CG4567 FBgn0243517 FBtr0079413 2 1 1 100 2L 7220815 7220833 ATCATCACCGGAACTGAGG 59 7220669 7220752 GTACTCGATCTCAGCTCTCC 59 NA Drosophila melanogaster 61 CG11221 FBgn0031855 FBtr0079303 1 1 1 255 2L 6743021 6753949 GCACTATCGAGAAACGCTC 58 6754168 6754186 ATGAGATGGATCTGTCCGC 59 NA DesignRelaxed Drosophila melanogaster 61 Tig FBgn0011722 FBtr0079275 1 1 1 85 2L 6422509 6423135 TAAGAACTCGCATCACAGGA 58 6422443 6422461 GATAGGTCTCGTAGCCCTG 58 NA InUTR Drosophila melanogaster 61 CG42369 FBgn0259715 FBtr0299968 1 1 1 60 2L 6396785 6396803 CCTGGACACGGATATGGAG 59 6396743 6396762 GACTCGGTTCAGAAAGACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9507 FBgn0031808 FBtr0079255 3 1 1 60 2L 6381674 6381692 AGATGCGACTCTACTACCG 58 6381713 6381734 AGGTACTTCTTGAGGTTGTACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 1 2 2 119 2L 6067223 6067294 TACTTGAGAAGCTGGTGCC 59 6067377 6067395 CAAAGCCCTGTTCCAACTG 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 1 4 4 91 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719354 5719372 CATACCGAATGGCATCCAG 58 NA Drosophila melanogaster 61 CG8680 FBgn0031684 FBtr0079025 2 1 1 81 2L 5099784 5099802 GAACGAGTTGTCTTCTGCG 59 5099658 5099739 GATTTCCGGGTTTGTCCAG 58 NA Drosophila melanogaster 61 CG15435 FBgn0031608 FBtr0077441 3 1 1 97 2L 4460071 4460089 AACGAGTTTCTCAACTGGC 58 4460220 4460238 CATATGTTGCGTGGCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Dim1 FBgn0031601 FBtr0077435 2 1 1 80 2L 4403344 4403363 ATATGCTCCCTCATTTGCAC 58 4403403 4403523 AACGTATTACAACTACTCGGTC 58 NA Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0289933,FBtr0077507 2 2 2 60 2L 4007713 4007733 TCAATATCAACCTCAAGTGCG 58 4007752 4007773 TTTGCATAGTACAGGACTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 3 2 2 167 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466927 3466946 TTGACAATCTCGTTGTCGAC 58 NA Drosophila melanogaster 61 CG8837 FBgn0031520 FBtr0077583 2 1 1 88 2L 3322748 3322827 ATGATAGAGGCATTCAATGCG 59 3322877 3322895 ACGAATATTGAGGCTCCGG 59 NA Drosophila melanogaster 61 Drp1 FBgn0026479 FBtr0077744 1 1 1 117 2L 2582258 2582276 ATCGTGAGTCCAGTGAAGC 59 2582095 2582180 ATTTGATCAGGTGTTCGATGAC 59 NA Drosophila melanogaster 61 CG15386 FBgn0040715 FBtr0077842 2 1 1 185 2L 2216948 2217020 GAATCGAGAGTTTCGTCAGC 59 2216782 2216806 GGACTTAAAGTAGGGATTACTAAGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 3 2 2 126 2L 2159241 2159325 TGAGCCCAATACAAATGGC 58 2159133 2159152 GTCGACGATCTTGAAGACTC 58 NA Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0100503,FBtr0077866 3 2 2 99 2L 1992114 1992132 TGTACTTCTGCTTGGCCTC 59 1991980 1992004 CTTCTTCCTATGAACATTGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr22a FBgn0045501 FBtr0077897 2 1 1 81 2L 1793821 1793906 CGCAGAGTAACAGAATTCACC 59 1793760 1793784 CATAGTTTATATCGAGCAATCCCAG 59 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010 3 1 2 157 2L 1586779 1586860 GCAGTTTACTGACCTTGGG 58 1585158 1585177 ATAGTATCCCATGATGCCCG 59 NA Drosophila melanogaster 61 haf FBgn0261509 FBtr0077875 3 1 1 85 2L 1601904 1602331 GACTTGCAGGTTACATCGC 59 1602379 1602398 TGAATGGAGTAGAAGCCTCG 59 NA Drosophila melanogaster 61 Or22b FBgn0026397 FBtr0077874 1 1 1 80 2L 1523521 1523681 GATATTGGACTATGTCGACGC 59 1523720 1523741 AGTACAATACCGATCAAGAGGA 59 NA Drosophila melanogaster 61 CG5011 FBgn0040723 FBtr0077973 2 1 1 60 2L 1200996 1201014 AACCTCCTCACGGAAACAG 59 1201038 1201056 TATGGATACGGACCATGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ranbp16 FBgn0053180 FBtr0074162 2 1 1 82 X 15823612 15823698 TATTACCGATCGTTGAAGGAC 57 15823550 15823568 AGATCATCGAACCATTGCG 58 NA Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 3 2 2 120 X 12671248 12677129 CTTTACAGCTGCACTCGAG 58 12671146 12671164 TGGTTCGGAGTGATAGCAG 59 NA Drosophila melanogaster 61 CG34024 FBgn0054024 FBtr0100079 3 1 1 74 3R 21756463 21756481 CAGTGCTCGCTAGTTTGTG 59 21757154 21757175 TGATGTCTATGGACATTAGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6195 FBgn0038723 FBtr0083803 1 1 1 81 3R 15472848 15472947 GATTCTGAGAAAGGGCGTC 58 15472785 15472803 CAGGGCATACTTGAACTGC 58 NA Drosophila melanogaster 61 CG5302 FBgn0038351 FBtr0083149 2 1 1 80 3R 11463376 11463396 TTACAATCCAATGACGATGGC 59 11463433 11463512 GGCCTTATATTATCTGTGTACTGC 59 NA Drosophila melanogaster 61 CG12594 FBgn0037941 FBtr0082429 2 1 1 80 3R 7556028 7556109 GTCACATTAAGGGCTAAGAACG 59 7556147 7556168 CAGATAAAGATTGTGAGTGGCG 59 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 1 2 3 91 3R 3761545 3761565 CTGATGCCACTCATGTATGTG 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 1 2 2 112 3L 21675715 21675790 TACAAGAAGCTCGTTCAGCA 59 21675863 21675883 CCTAATTGGCACAAATTCGGT 59 NA Drosophila melanogaster 61 CG11253 FBgn0036338 FBtr0075894 1 1 1 98 3L 13018102 13018120 GATACGGACCATACTTGCG 58 13017965 13018040 CTTGAGCTGACAATCACGG 58 NA Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 2 2 2 117 3L 10640226 10652484 ACGAGATACAGATCTATCGGG 58 10640129 10640147 TTCAGCTTGTTCACCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7457 FBgn0035812 FBtr0076814 2 1 1 80 3L 7719116 7719197 AACGATTACCTGAAGATTGCG 59 7719056 7719074 ATGAACACGTCCCAAAGTG 58 NA Drosophila melanogaster 61 CG32488 FBgn0052488 FBtr0073008 2 1 1 199 3L 3015473 3015491 TTTAGATGCCGCCTATCCC 59 3015228 3015311 TATCCGTCTGCAGTGTATCG 59 NA Drosophila melanogaster 61 CG42304 FBgn0259200 FBtr0299684 3 1 1 80 3L 2653598 2653617 AACACAATCACCTTGTCCCT 59 2653655 2653738 GTCTGGTGTGGTTACATATTTCTG 59 NA Nonspecific Drosophila melanogaster 61 CG1246 FBgn0035360 FBtr0072938 2 1 1 84 3L 2649198 2649270 ATACAACGTCCATGAAAGATGC 59 2649314 2649333 GGCTCCATTAGAGTCCAGAC 59 NA Drosophila melanogaster 61 CG4049 FBgn0034976 FBtr0072285 2 1 1 113 2R 19998432 19998453 CCGATCAATAGTATCGAAACGT 58 19998274 19998358 GTCGTAGAAGCTTGGACTC 57 NA Drosophila melanogaster 61 CG3045 FBgn0034703 FBtr0071787 2 1 1 80 2R 18061065 18061143 CATACAAATTCAGGCTACGAC 57 18061005 18061024 CATTATGCAACGGATTTGGT 57 NA Drosophila melanogaster 61 GstE10 FBgn0063499 FBtr0086726 1 1 1 60 2R 14284371 14284389 CGCATTGCCCTTCTATGAG 58 14284329 14284348 AATCTTATCGGCCAACAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5770 FBgn0034291 FBtr0086812 1 1 1 107 2R 13932205 13932223 AAGACCTATCAGTCCGACG 58 13932053 13932134 ATTATCAGCAGCATTCGCG 59 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081160 1 1 3 87 2L 19167698 19168104 TTGGAAGGAGCTGTTACTCC 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 CG17344 FBgn0032755 FBtr0081152 2 1 1 274 2L 19102054 19102072 CAAGGACACCAATTTCGGT 58 19102369 19102391 CCATCTCAATCGGATAAACTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 glu FBgn0015391 FBtr0080935 1 1 1 85 2L 16734394 16734412 CTCCGCTGTACTTCATGGA 59 16734259 16734349 CGTACGTTCCTTGATATAGTGAC 58 NA Drosophila melanogaster 61 Or22c FBgn0026396 FBtr0077826 1 1 1 80 2L 2055041 2055059 ACCGCTGATTATGGGTCTC 59 2055099 2055335 GAGGGCAGTATGATATTAAAGGG 59 NA Drosophila melanogaster 61 CG11911 FBgn0031249 FBtr0078098 1 1 1 60 2L 320798 320817 TTTCATCTTCAACGAGTGGG 58 320757 320775 CTCATGGACTTGTTCACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17078 FBgn0086855 FBtr0300804 1 1 1 80 2L 275245 275331 GTGGCTCTAGTCAATTCACC 58 275184 275202 CTGGCCTTCAATGTAGACC 57 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 3 2 3 81 2L 4879192 4880392 CTCGCATACATACAGGAGAG 57 4879130 4879148 TGCTTGGTCAGATAGTCCT 57 NA Nonspecific Drosophila melanogaster 61 CG7432 FBgn0038727 FBtr0301213 3 1 1 81 3R 15496150 15496168 CGATATGATTCCCACTGGG 57 15496211 15496292 TATAGACACCTGGATATCCCG 58 NA Drosophila melanogaster 61 Pvf2 FBgn0031888 FBtr0079423 1 1 1 150 2L 7083306 7083324 TCTCATCCGATTGATCCGC 59 7074345 7083192 ATAGTCATCGCTCCCATCG 59 NA Drosophila melanogaster 61 CG3557 FBgn0031423 FBtr0077790 1 1 1 100 2L 2385444 2385518 TGTCGAATGAAGGATCAGCT 59 2385363 2385381 AGATGGATAAGCCGAGCTG 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085597 3 1 3 92 3R 25865120 25865208 AAATTTGCCGGACTACGAC 58 25865046 25865064 CTTGAAGATGCCCTCTGGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 m4 FBgn0002629 FBtr0084980 2 1 1 78 3R 21849921 21849941 AAATTGAGGACTACGACTTCG 58 21849863 21849881 CAGAAGAATGTGCCGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9467 FBgn0037758 FBtr0082156 2 1 1 85 3R 5626398 5626416 GTCAACCTCAATGTGGGTG 58 5626253 5626271 AGAAGAGCCGTGAAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302546 1 1 5 215 3L 7361073 7361170 TGTTAAAGGTGAAGAAGCGC 59 7360877 7360895 AATCACCGCAGTACTCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 1 3 3 80 3L 310167 310285 ATGATTCTGGCATCATCTGTG 58 310107 310126 AATCAAGCGACTCATGTGAG 58 NA Drosophila melanogaster 61 CG6026 FBgn0038676 FBtr0273301 3 1 1 166 3R 14867810 14867894 ACAACCATTGAAATTCCCTGC 59 14868017 14868040 GGTTGTACTCGTTATAGAAGTTGG 59 NA Drosophila melanogaster 61 Cyp6g1 FBgn0025454 FBtr0087992 2 1 1 80 2R 8074397 8074483 TTATGCAGGAGATTGGAAAGGA 59 8074522 8074542 TCTCCGTAATGAAACTCCCAG 59 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807,FBtr0300806 2 2 2 88 XHet 57050 57071 GCCTCTTTGTTCTTAATCTTCC 57 57120 57601 GTCCTCGTCGTTAAGATGC 58 NA Drosophila melanogaster 61 swaPsi FBgn0016974 FBtr0070923 1 1 1 268 X 6256360 6256378 GTATAGGCTGAGTCGCCAG 59 6256057 6256128 CATGATGTTCGCCACTACC 58 NA DesignRelaxed Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 3 2 2 81 X 22386913 22387149 CACCATCAAATTTCAACCACC 58 22386852 22386870 AAGTTCACGATTCTTGGGC 58 NA Nonspecific Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0077310,FBtr0300210 1 2 2 98 X 20340473 20340552 ATCGAACAGACACGAATGG 58 20340614 20340632 GTAGTACGGATTGCAGCTC 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074714 1 1 8 81 X 19390806 19400519 CTCGATTCGTAAACGCAGC 59 19400562 19400582 GATGATGCTCCTTTCACTTCG 59 NA InUTR Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388,FBtr0111000 1 2 2 80 X 17085682 17085701 GCAGATGCACTTAATGACTG 57 17085744 17085829 GGTAGTGTTGGAGACATCG 57 NA Drosophila melanogaster 61 mthl1 FBgn0030766 FBtr0074314 3 1 1 79 X 16537472 16537490 GATGAGGTACCGGAGAAGG 59 16537530 16541810 CTCAGTTGTGTTTAGCAAATGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9915 FBgn0030738 FBtr0112992 1 1 1 109 X 16205455 16205529 AATCTGATGACGACGGACC 59 16205364 16205385 GTCTTGTGATTTCTCTTTGCCT 59 NA Drosophila melanogaster 61 CG1368 FBgn0030539 FBtr0073891 3 1 1 170 X 14068862 14069023 GAAATTCCTTATTGCCTTCGC 58 14069155 14069173 ACATACGACTGCTGGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33247 FBgn0053247 FBtr0300096 2 1 1 110 X 13941009 13941027 TCTGATACACAGCTGGACG 59 13940857 13940935 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0070990 1 1 2 84 X 6572630 6572648 AGACGCAAACTTCCAATGG 58 6572222 6572582 AACGGTCTGCATTATTGCA 58 NA InUTR Drosophila melanogaster 61 mab-21 FBgn0029003 FBtr0070890 1 1 1 134 X 5906189 5906207 CTATCCAAGGAGTGCATCG 57 5903156 5903174 CTTCAGAATGCTCAGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6067 FBgn0029828 FBtr0070864 3 1 1 154 X 5849897 5851093 AATGCAAACGACCTACACC 58 5851211 5851229 GTTCCAAGGTCAACAGTCG 58 NA Drosophila melanogaster 61 mRpL30 FBgn0029718 FBtr0070682 2 1 1 104 X 4542117 4542215 TACTATCCCAGGACTCCCG 59 4542282 4542301 ATTCTCCCAGTAGGGATTGC 59 NA Drosophila melanogaster 61 CG15577 FBgn0040904 FBtr0070660 1 1 1 60 X 4170763 4170781 GGAGTTCTATCGCCAAGTG 58 4170721 4170741 TTTCAGAATGCCGTATTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 2 3 3 172 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770547 3770570 GAACATGGTGAAGATATGGAAGAC 59 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 1 3 3 140 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770518 3770538 CGGTATCATCAGAATAGCCCA 59 NA Drosophila melanogaster 61 ng2 FBgn0010294 FBtr0070540 2 1 1 81 X 3134302 3134320 AGAGGCCAAAGAAGGTCAG 59 3134239 3134257 GATCTGCGGTTTCTACTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 elav FBgn0260400 FBtr0114366 3 1 3 92 X 417083 417101 TTGAGTTGACTCCAACCGA 58 413266 417029 ATAAAGTCCAATTTCGCTCGG 59 NA InUTR Drosophila melanogaster 61 ase FBgn0000137 FBtr0070075 2 1 1 60 X 356295 356316 GATTCAAGAAGGAATTCAGCGA 59 356337 356355 CCAGCGGTTGTATTGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 3 4 4 105 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449556 3449574 GCTTGATACTGATCTCCCG 57 NA Drosophila melanogaster 61 CR40621 FBgn0085757 FBtr0114207 1 1 1 149 U 9411855 9411876 GAAATAAGACCTCTGTTCTGCT 58 9411986 9412004 ATCTTTGGCAATGCTTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42432 FBgn0259863 FBtr0300160 3 1 1 67 U 8667581 8667599 TTTCGTTTGCACCAGATGC 59 8667532 8667552 TATTCATTGGTGAGGACTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42432 FBgn0259863 FBtr0300160 1 1 1 64 U 8667581 8667599 TTTCGTTTGCACCAGATGC 59 8667535 8667553 TCATTGGTGAGGACTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42427 FBgn0259858 FBtr0300155 1 1 1 60 U 7861869 7861887 GTTTGATTTCCCATGCGGT 59 7861910 7861929 TTACGGGCGAAATCAATCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40936 FBgn0085539 FBtr0302345 2 1 1 166 U 8041282 8041361 GCGATCTGAAATAGAACGCA 58 8041488 8041508 GCCAGTTAGTGTCATTAAGCT 58 NA Drosophila melanogaster 61 CR32011 FBgn0052011 FBtr0089182 3 1 1 113 4 30381 30561 CATTCGTTAAGAAGGGTGACAG 59 30289 30309 GGCTGGTAATATTGCATTGGG 59 NA Drosophila melanogaster 61 CG32021 FBgn0052021 FBtr0089244 3 1 1 91 4 929764 929783 TGTCCAAGATCACGAAAGTG 58 928538 929712 TCTACCAAAGACCCTAAACCT 58 NA InUTR Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 2 2 2 81 4 822726 823031 AAAGTCATGGGAGAGTGTG 57 822663 822682 TTTACTGAGTCACGACTCAC 57 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 1 4 4 80 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383623 383641 GTAGAACTGTGCAACGAGC 59 NA Drosophila melanogaster 61 CR31339 FBgn0051339 FBtr0083867 2 1 1 60 3R 16020117 16020135 TACAAGTCCTGGCAAGCTC 59 16020157 16020177 GATTACATAGCAGCTCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Brd8 FBgn0039654 FBtr0085394 3 1 1 60 3R 25050674 25050694 TGACTCCAACGACAATATACC 57 25050716 25050734 ACCACGATCCTTACTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6059 FBgn0039491 FBtr0085130 3 1 1 83 3R 22949694 22949781 CAATCTCTAACAAGGACCTCCA 59 22949632 22949650 TCTGGTGGTCCTTAAGCTC 58 NA Drosophila melanogaster 61 CG14545 FBgn0040602 FBtr0084913 3 1 1 189 3R 21676845 21676863 TTTCCCTCGACTTCTGGAG 58 21676605 21676624 CAAATCGATGATCAAACGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10560 FBgn0039325 FBtr0084852 2 1 1 82 3R 21144645 21144669 CTTCTGAACTACTCTAAGAAACTGC 59 21144524 21144605 CAAATGAAGGCCCATCCAC 59 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0111008,FBtr0084603 1 2 2 80 3R 20135391 20135412 CTGCGAGATCAACATTAATGAG 57 20135452 20135536 GTATAGGTTCCAATCCCGTC 57 NA Drosophila melanogaster 61 CG16710 FBgn0039101 FBtr0084438 1 1 1 80 3R 19508288 19508498 CTGGCTGAGTCTGAATATCC 57 19508541 19508559 AAAGGGCAAGAGTGATGTG 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 TotC FBgn0044812 FBtr0083972 1 1 1 80 3R 16698761 16698844 CCTCCATTTCTCTACTATGCC 57 16698886 16698904 CAGATTCCCTTTCCTCGTC 57 NA Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 3 2 2 80 3R 16435960 16435978 GAGTCTCAACTTCCGGGAG 59 16436020 16436126 ACATCTAGAGACATGGGACTG 58 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083638 3 1 5 104 3R 14410296 14412006 CAACGAGAATCGTAGGTGG 58 14412071 14412092 ACATCCAAAGATTCCTGTATCC 58 NA InUTR Drosophila melanogaster 61 CG14312 FBgn0038596 FBtr0083599 1 1 1 174 3R 14109069 14109144 GTCGACAGGAACCTCTGAC 59 14108913 14108931 GTTTCCATCGATGATGCCC 59 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 2 3 3 82 3R 13953368 13956126 CCCATTACTGGTTCCATCGA 59 13956171 13956189 CAATGTGACAACACGGGAC 59 NA Drosophila melanogaster 61 CG7794 FBgn0038565 FBtr0083540 2 1 1 95 3R 13849670 13849689 CGTTCCTCACGTTCTTTGAG 59 13849744 13849823 GGATTTCATCTATCACTGTGGG 58 NA Drosophila melanogaster 61 CG4221 FBgn0038385 FBtr0083201 3 1 1 92 3R 11757605 11757695 ATACAAGTCACAGATGCGG 57 11757751 11757769 ATCTGTGATGTTCAGGCAG 57 NA Drosophila melanogaster 61 Aos1 FBgn0029512 FBtr0082593 3 1 1 98 3R 8258911 8258929 GCGTCAAGTTCATAGCCAC 59 8258775 8258853 CCTTGTGCTTAATAACATCCTCG 59 NA Drosophila melanogaster 61 CG14739 FBgn0037987 FBtr0082553 2 1 1 203 3R 7874914 7874932 GGTTAGAGTAGGCGGTAGG 58 7874670 7874688 TGTTCACCAGCAATTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082535,FBtr0082534 1 2 2 80 3R 7581386 7581469 GTTATTGACACCAGTTGGCAG 59 7581326 7581345 TCGTAATAGTGTGCCTCACC 59 NA Drosophila melanogaster 61 CG6834 FBgn0037935 FBtr0082438 2 1 1 84 3R 7511672 7511744 CAACTGAAAGATCACACTTCCA 59 7511609 7511628 TAACGTCCGTAAAGTTGTCG 58 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082277,FBtr0082276,FBtr0082275 3 4 4 74 3R 6610337 6610356 ATATAGGGAGTGGGACTTGG 58 6610393 6610411 TCTATCTCGTGCTTGGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12811 FBgn0037779 FBtr0082204 3 1 1 170 3R 5874173 5874191 AAATCGCCTTTGTTGAGGA 57 5873477 5873566 GGTAATACAGTGTGGCTGG 57 NA Drosophila melanogaster 61 CG16790 FBgn0037713 FBtr0082112 1 1 1 93 3R 5395404 5395423 CAGATCGATGAATTCTCCCG 58 5395269 5395287 CATTCGTGTAGATCCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 2 1 1 75 3R 5380877 5380895 CTGCTGTCCAAGAAACTGG 58 5380759 5380780 GGCACTCATAGAGACAATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207,FBtr0082064,FBtr0082065 3 4 4 82 3R 5347630 5347648 AAGGCTTTGTTGGACAAGC 59 5347694 5347775 ATCTCTTGAAAGCGCTTGC 59 NA Drosophila melanogaster 61 RhoL FBgn0014380 FBtr0082124 1 1 1 90 3R 5323662 5323680 TCGGGACTACAATCTGACC 58 5323513 5323608 GAAGCAGTTGGTACTGGGA 59 NA Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 2 2 2 60 3R 4600715 4600734 CAATGGCAATTGGAGGACTG 59 4600610 4600695 AATGCCCATCCAAGTAAATCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 tex FBgn0037569 FBtr0081861 1 1 1 81 3R 4134258 4134276 TTGGAAGACCTGAAGTCGT 58 4134140 4134214 AGACCGAGTGAACCTTAGAC 58 NA Drosophila melanogaster 61 CG15864 FBgn0040528 FBtr0300372 2 1 1 260 3R 4075476 4075495 ACTACATGTTGCACTACGAC 58 4075833 4075908 TCGTGAGCACGTATTTGGA 59 NA DesignRelaxed Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081617 3 1 2 237 3R 2942400 2942418 TTCCAGTTCAGTACTCGGC 59 2941368 2941387 CTTGAAGCAGTTCTTGTGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10991 FBgn0037389 FBtr0078646 1 1 1 122 3R 1674783 1675005 AACAGCGTCAGCATAAGTC 58 1675091 1675109 GTAATAGGACACTGCGTCG 58 NA Drosophila melanogaster 61 CG31548 FBgn0051548 FBtr0078736 3 1 1 62 3R 1462216 1462234 CATCGAGACGACTAGCCTG 59 1462172 1462190 TAGATTGCCCTCAGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 3 3 3 90 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210503 1210522 ATATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 laf FBgn0020280 FBtr0078852 2 1 1 80 3R 704141 704213 CTCTGATTAGAAATGTCCCGTC 58 704082 704100 TTCAGAATCGTCCAGGTCC 59 NA InUTR Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 2 3 3 123 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464551 464749 TTGCAACAGATCTTCTACGTG 58 NA Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450 2 1 2 117 3L 21753606 21754066 AACCTTGGGAAGCAATCAC 58 21753507 21753525 GATATTCATGCCCTGCAGC 59 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 3 2 2 110 3L 21513429 21513511 TTACGGACAGGTTTACAAGG 57 21513584 21513602 TCACGAACAGCTGTAATGG 57 NA Drosophila melanogaster 61 Cpr78Cc FBgn0037069 FBtr0078338 1 1 1 126 3L 21293725 21293813 TTAAGCTATCGCTCTGCCT 58 21293903 21293921 TATTGGTAGTTGCCCTCGG 59 NA Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0078333 1 1 2 80 3L 20955088 20955107 AGAAACTATTGCGTACGGTG 58 20954874 20955045 TTAAATGAACCGTCGGCAG 58 NA Drosophila melanogaster 61 CG17122 FBgn0036962 FBtr0074849 1 1 1 60 3L 20268015 20268036 GACTTGGAGTCGAAATACAAGG 59 20267976 20267996 TAAGCAGCTTTATTTCGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-F FBgn0036947 FBtr0074860 3 1 1 107 3L 20194652 20194670 GCATTGAGCATCTGCTTCC 59 20194436 20194581 TCCCAAGCAGATATGGCTG 59 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 1 3 3 81 3L 19789421 19789441 GCCACTATGACAGTAATGACG 59 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 3 2 2 82 3L 19272149 19272168 CGTGCTGGTAATGTTTATCG 57 19272211 19272501 TTCGCTGGTAATTATCCTCTG 57 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 1 4 4 101 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667496 18667514 ATATGGAGTTCGCCTTCCT 58 NA Drosophila melanogaster 61 CG5147 FBgn0036775 FBtr0075136 2 1 1 80 3L 18101618 18101689 ACACTTAAGGACACTTTGGC 58 18101557 18101576 AGGTTCCTCTAAACTGGCTG 59 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 1 2 2 128 3L 17503756 17503774 CCTGTCCCATCATCTACGG 59 17503862 17504022 CCGTGATTCCTAGGAAATATTGC 59 NA Drosophila melanogaster 61 CG13033 FBgn0036638 FBtr0075400 1 1 1 116 3L 16538386 16538641 CAAAGATGCAAGGATTCAAGGA 59 16538291 16538309 CTGGAGGCAGATACTCCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 2 1 3 101 3L 15516655 15516673 TCCAATGATGGCTTTGACG 58 15515584 15515662 ATCCAGTATGGTGACAAATCTC 58 NA Drosophila melanogaster 61 CG6878 FBgn0036488 FBtr0075643 1 1 1 80 3L 15155167 15155186 GCTTCATCATCGGATTCTGC 59 15155229 15155370 CGCGTAGTCCGTATCTGAG 59 NA Drosophila melanogaster 61 CG6650 FBgn0036402 FBtr0075769 1 1 1 80 3L 14025985 14026062 ACATGTCTAGAAAGCTGCG 58 14026105 14026124 GATGGATGTCATCGTTTGGA 58 NA Drosophila melanogaster 61 CG14118 FBgn0036323 FBtr0075870 3 1 1 64 3L 12885953 12886435 TCATCAAGGTTCTCCCTGC 59 12886463 12886481 GCTGCACTTTATCCAAACG 57 NA DesignRelaxed Drosophila melanogaster 61 CG32111 FBgn0052111 FBtr0075910 3 1 1 81 3L 12626975 12626996 TGAATTAACCGACTATACCCGA 58 12627038 12635157 GATTTGTAGAACCGGCCAC 58 NA InUTR Drosophila melanogaster 61 CG6910 FBgn0036262 FBtr0290130 2 1 1 92 3L 12179143 12179226 AGAATCCTTGCGGAGAACC 59 12179279 12179300 GAATTTGGAGGGATTCTTGTCC 59 NA Drosophila melanogaster 61 CG14137 FBgn0036178 FBtr0076144 1 1 1 60 3L 11592982 11593000 AAACAAAGATGCTGCGCTC 59 11592940 11592958 GCCTGATTTCGTCGATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607,FBtr0301858,FBtr0299606 3 3 3 102 3L 9732061 9732079 TATGACAAGTCCTTCCGCA 58 9731363 9731995 GATTGAGCGTTTCCGTCTC 59 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428,FBtr0076427 1 2 2 86 3L 9490275 9490293 AAAGTCGGATACCGAGCAG 59 9490140 9490227 TCATTATCGGTTGTTGGATGC 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 1 4 4 80 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463531 9463673 CATCCTTCGTGTAGATTTCCG 59 NA Drosophila melanogaster 61 CG4483 FBgn0035970 FBtr0076502 2 1 1 60 3L 9229191 9229211 CGATGGTTGATCAGATATGGA 57 9229151 9229169 GGTTTGTTTGGGTCAAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32026 FBgn0052026 FBtr0076584 1 1 1 60 3L 8831642 8831661 TGCGGACAAGATAGAGAAGG 59 8831680 8831702 CATGGTGCGAATATTATCATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34427 FBgn0085456 FBtr0112728 3 1 1 92 3L 8798601 8798619 TAACTCCTGCCCAGATGTG 59 8798674 8798759 AACAACTAATGTAGCGCTGG 58 NA Drosophila melanogaster 61 CG8543 FBgn0035787 FBtr0076863 2 1 1 60 3L 7463017 7463037 TGATCACCAAGTCCTTCTACG 59 7462977 7462995 GAGTACACGGTCTTAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr65Ax2 FBgn0042118 FBtr0077022 1 1 1 87 3L 6143720 6143808 TCATATGCAGTTGAAACCAGC 59 6143653 6143671 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG6619 FBgn0035676 FBtr0077049 3 1 1 85 3L 6072371 6072450 GTGTGAGGAAGGTGGATCTC 59 6072498 6072516 GTGTACCCTCTCCAGTTCG 59 NA Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 3 2 2 211 3L 2587882 2588095 GTTGTCAAGGACATCATCCAC 59 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12025 FBgn0035285 FBtr0072834 3 1 1 87 3L 1865845 1865863 TGATATCCACGCCCATGAG 59 1865913 1867155 TACTTGTTGTAGCCCTTGGG 59 NA Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072725 1 1 2 261 3L 1322692 1322759 TGGTTTGGTTATCCTGCAG 57 1322449 1322472 CTCTGGTGGATAATAGTAATGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9119 FBgn0035189 FBtr0072635 1 1 1 80 3L 1204276 1204563 TGCAGAACGTTATACAGGGT 59 1204215 1204233 CCTTCAGATCCGGACAAGG 59 NA Drosophila melanogaster 61 Reg-2 FBgn0016715 FBtr0072561 1 1 1 112 3L 606428 606446 CTCCAATTCCGAACCACTC 58 606277 606352 ATCTTGTACCAGTTGGCCT 58 NA Drosophila melanogaster 61 Tudor-SN FBgn0035121 FBtr0072519 1 1 1 80 3L 259903 260318 ACAAGGAGACACTTCCGAC 59 259841 259859 CATACTCCGTAGCGTAGGG 59 NA Drosophila melanogaster 61 CG7028 FBgn0027587 FBtr0072528 3 1 1 90 3L 209364 209458 AATTTCGATTCACCCAACAC 57 209293 209311 AATAACCTTCAGCGTCGTC 58 NA Drosophila melanogaster 61 5SrRNA:CR33378 FBgn0053378 FBtr0086370 1 1 1 60 2R 15644478 15644496 ATACATCGGTTCTCGTCCG 59 15644436 15644454 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33389 FBgn0053389 FBtr0086381 1 1 1 60 2R 15640415 15640433 ATACATCGGTTCTCGTCCG 59 15640373 15640391 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33394 FBgn0053394 FBtr0086386 1 1 1 60 2R 15638588 15638606 ATACATCGGTTCTCGTCCG 59 15638546 15638564 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 1 2 2 188 2R 18299367 18299386 CGAGGAACTATTTGAGGCTG 58 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA Drosophila melanogaster 61 CG3045 FBgn0034703 FBtr0071787 3 1 1 80 2R 18061602 18061682 GATACTATCGAATCCAACTTGTTCC 59 18061546 18061565 GCGGTGATAATTGGAAGTGG 59 NA Drosophila melanogaster 61 gom FBgn0029084 FBtr0071766 3 1 1 92 2R 18028019 18028037 AGAACAGCCGCTATAACCT 58 18028092 18028160 TTAGACAGAGGACACCTGAC 58 NA Drosophila melanogaster 61 pirk FBgn0034647 FBtr0071682 3 1 1 60 2R 17549117 17549139 GACTCAAGATCCAGAACAATAGC 59 17549079 17549098 TAGATCCTTCCGTCGTTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 1 3 3 80 2R 17059016 17059036 TAAATGTTACGGACTCACTGC 58 17059077 17059148 TCAAAGTACTGGCAAATGGG 58 NA Drosophila melanogaster 61 CG30154 FBgn0050154 FBtr0086215 1 1 1 111 2R 16420937 16420955 TCTGCTTCGTCGTTCTCAG 59 16421099 16421117 TTGTCGGTGGACTCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15107 FBgn0041702 FBtr0086600 2 1 1 101 2R 14859263 14859348 AGATTATCTACGAAGTCGCGG 59 14859182 14859200 AAATGCGTTTCAGCTGCTC 59 NA Drosophila melanogaster 61 Ote FBgn0003022 FBtr0086768 2 1 1 60 2R 14163598 14163618 GACACTGATTCCAAGGAAGAC 58 14163558 14163576 GCAAACGAGCTAGATTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6568 FBgn0034210 FBtr0086964 3 1 1 80 2R 13294429 13294447 AACAAAGATGACTGGAGCC 57 13294294 13294385 TTGAGAACGGGATATCCCA 57 NA Drosophila melanogaster 61 JhI-26 FBgn0028424 FBtr0087139 2 1 1 88 2R 12178248 12178442 TTTCCTAAGTCGCGGTGAG 59 12178492 12178512 CCAAACTCATGAGGAAACTGG 59 NA Drosophila melanogaster 61 CG7786 FBgn0034096 FBtr0087190 1 1 1 60 2R 12122234 12122252 GCCTTCGAGTATATCGCAC 58 12122192 12122210 CCATCAGCGGAAATTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 1 5 5 82 2R 12093319 12093420 TGAAGTGAAGAAGGCATATCG 58 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 CG33462 FBgn0053462 FBtr0087284 2 1 1 81 2R 11584506 11584528 GCTCTGGCACTCTAATTAATCAC 59 11584623 11584717 AGGCGAACGGTTATTAGCA 59 NA Drosophila melanogaster 61 CG8155 FBgn0034009 FBtr0087391 2 1 1 90 2R 11209382 11209489 AAAGTGAAGAAATGCGAACCC 59 11209312 11209330 GGGAGTACAACACCTCCAG 59 NA Drosophila melanogaster 61 Cpr50Cb FBgn0033869 FBtr0087630 2 1 1 111 2R 9682702 9691140 GTCCTGCTTAGCTTATCCCT 59 9691214 9691232 GTTCCGAGTAGTCGTAGCC 59 NA Drosophila melanogaster 61 CG17739 FBgn0033710 FBtr0087893 3 1 1 80 2R 8194902 8194923 TGGATGATAACTATGTGCTGTC 58 8194961 8195075 CACTGAGGCTAACATTATACCT 57 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 3 2 2 87 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877124 7877144 GCTGATTTACGATACCGATGG 59 NA Drosophila melanogaster 61 ix FBgn0001276 FBtr0088154 2 1 1 60 2R 7247418 7247437 AACATTTCCAGGGTGAAGAG 57 7247377 7247395 GGATGGTGAGGAACATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11778 FBgn0033371 FBtr0300173 1 1 1 83 2R 4972032 4972050 CAGACATCACCAGGGTAGC 59 4972097 4972175 TAAGAATCCCTGCAAGCGA 59 NA Drosophila melanogaster 61 lin FBgn0002552 FBtr0088651 1 1 1 142 2R 4802505 4802582 GTTTGTAGACCATTTGCAGGA 58 4802686 4802704 CTGTTCGTTTGATGCGGAG 59 NA InUTR Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649 3 3 5 157 2R 4789010 4789833 ACATATAAGCCGGAGCTGG 59 4789950 4789972 GATGTACTTCATCATCTTAGCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30354 FBgn0050354 FBtr0088702 2 1 1 90 2R 4564767 4564844 TATTTCGAACCTAAGGAATGGC 58 4564895 4564913 TGCGGATCAACTAACTCCT 58 NA InUTR Drosophila melanogaster 61 CSN7 FBgn0028836 FBtr0088742 2 1 1 91 2R 4315222 4315241 CCAATTGCATCGAAATGCAG 58 4315292 4315506 ATTGATGAGATCTTGTTCCACG 58 NA Drosophila melanogaster 61 CG8701 FBgn0033287 FBtr0088740 1 1 1 61 2R 4259244 4259262 GCCCTAGAATCAAGATGCC 58 4259287 4259305 TCTAACGACGTGGCAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34211 FBgn0085240 FBtr0112404 1 1 1 60 2R 1934795 1934814 TAGAGTCCACCTTGCTTCTG 59 1934834 1934855 GTCTTAAAGGGACAAATCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111258 3 1 4 72 2L 22431077 22432692 TTAAAGCAATGGTACCGGT 57 22432726 22432746 GCAGGTACTATTCTTCCACTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 His3:CG33806 FBgn0053806 FBtr0091810 1 1 1 60 2L 21430536 21430554 CGCTCAGGACTTTAAGACG 58 21430578 21430596 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9253 FBgn0032919 FBtr0081468 1 1 1 80 2L 21143496 21143576 AAGATCTCGGTCTCAATGAGG 59 21143618 21143636 CCTCACGTTGGATCTTCGA 59 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 3 2 2 137 2L 20660382 20660465 CAAGTTCTTCGATGTGGACAC 59 20660265 20660283 AAATCCGGCGTATAGGTGG 59 NA Drosophila melanogaster 61 CG2493 FBgn0032864 FBtr0081363 3 1 1 60 2L 20463222 20463240 TGGACCATTTCAGCTTCCT 59 20463180 20463199 GAGTCGTTGTACAAGTACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdc23 FBgn0032863 FBtr0081362 3 1 1 125 2L 20461036 20461114 CTAGACTCAGAGGATCGCA 58 20461202 20461221 GGAACTGGTATCTGCATTCG 58 NA Drosophila melanogaster 61 CG41073 FBgn0259997 FBtr0100266 2 1 1 83 2L 20231624 20231757 CTGGATTTAGCGTAGTCCAC 58 20231560 20231578 TTTCTCGGCATTCCTTTGG 58 NA Drosophila melanogaster 61 CG10137 FBgn0032800 FBtr0081248 3 1 1 89 2L 19528928 19529098 CACACCAGTATCTTATACCTGAG 58 19529147 19529165 CAAAGTACTGCGAGGATGG 58 NA Drosophila melanogaster 61 BicD FBgn0000183 FBtr0081002 3 1 1 81 2L 17463873 17463996 ACCTTACAGGGTGAACGTG 59 17463810 17463829 TGTGGTACATAGACTCACGG 59 NA Drosophila melanogaster 61 CG4580 FBgn0032585 FBtr0080865 2 1 1 182 2L 16489424 16489444 CAGTACTACCAAGACTTGCAG 58 16489588 16489659 AAAGAATGGCTGAGGTGGA 59 NA Drosophila melanogaster 61 CG17328 FBgn0028895 FBtr0080829 3 1 1 101 2L 16300388 16300406 CTTTGCTATGATGCCCTCC 58 16300525 16300545 CGGTAAATACAGTTGTTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4935 FBgn0028897 FBtr0080825 2 1 1 90 2L 16263173 16263273 TCGCATAAGTGATAATGGCG 58 16263326 16263344 ATACATGTCCCGTCGTCTG 59 NA Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271 3 1 2 151 2L 11586621 11586703 GCATAGATAATCAAGAGCAACCTC 59 11586493 11586512 CGAGTCCAACAACTGTTCAG 59 NA InUTR Drosophila melanogaster 61 grk FBgn0001137 FBtr0079708 1 1 1 80 2L 8431926 8431944 AGTCTTCCATTCCTGCCTC 59 8431729 8431885 TAGATGTAGTCACCATTCCAGC 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 2 4 5 81 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682044 7682122 CCTGTTCCATCTTGAAGATATGTC 59 NA Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 3 2 2 80 2L 7447294 7447517 TCATGCACAAGGAAATGGC 59 7447232 7447251 CCAGACTGAGATCAATTGGC 58 NA Drosophila melanogaster 61 CG18304 FBgn0031869 FBtr0079367 2 1 1 80 2L 6934897 6934998 CAAGGAACAATTACAGAGCAC 57 6934837 6934855 TTCACCTGTTGCTCATAGC 57 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 3 2 2 80 2L 6652431 6652504 GCTCATTAGAAAGGGATCTGGA 59 6652545 6652563 GACCGTTAAGGACTTCGGA 59 NA Drosophila melanogaster 61 CG9550 FBgn0031826 FBtr0079286 1 1 1 80 2L 6497656 6497674 CCATTCATCAACATGGCGG 60 6497715 6497798 GTTCAGATTTAGGTCTTTGCGT 59 NA Drosophila melanogaster 61 CG9531 FBgn0031817 FBtr0079270 2 1 1 80 2L 6466867 6466888 ATTTGATCATCTCCAATCCTCC 58 6466754 6466826 GGTTCTCATACACCACGAC 58 NA Drosophila melanogaster 61 CG8891 FBgn0031663 FBtr0079048 3 1 1 80 2L 4978702 4978788 GGGACTTTGGATGGGATCC 59 4978640 4978658 TGTTCTTCTCGGACTTGGG 59 NA Nonspecific Drosophila melanogaster 61 CG14044 FBgn0031650 FBtr0078990 3 1 1 80 2L 4943679 4943697 TACTACTTAGAGCAGCCGC 59 4943739 4943813 GCTTGGGATCTATTATCCGTC 58 NA Drosophila melanogaster 61 CG31955 FBgn0051955 FBtr0077540 2 1 1 80 2L 3712434 3712506 GCCTACAATATACTCCACCAG 57 3712374 3712392 CGGATGTATCTGCGTTCTC 58 NA Drosophila melanogaster 61 CG4726 FBgn0031307 FBtr0077958 2 1 1 90 2L 1143401 1145452 ATATTGGGCAAACTCGTGC 58 1145506 1145524 TGAGATTCACCTTCAGGCC 59 NA Drosophila melanogaster 61 CG14339 FBgn0031301 FBtr0077954 3 1 1 81 2L 1112437 1112519 CCAAGATAGAGCCAAACTATCC 58 1112560 1112579 AGGTCAACGGAGTCATAGTC 59 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0301087,FBtr0077951 1 2 2 60 2L 1037704 1037725 ACAAGATCAAGAAGCTGATGAG 58 1037746 1037764 GGCAGACTGAACACATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4375 FBgn0031295 FBtr0077997 1 1 1 60 2L 1026474 1026492 GGAACACAGTGAAGTCGAG 58 1026432 1026451 TCCGTTGGTAGTCTTGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 1 1 1 64 2L 860409 860781 AAATTTCGCTGGACCTCAC 58 860809 860827 CTTCAGGAACACCGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0112854 2 1 2 255 2L 548206 549031 TCAATGATCCGTACCAGCT 58 547892 547987 TAGTAGTACCTGAGTGCCC 57 NA DesignRelaxed Drosophila melanogaster 61 MED15 FBgn0027592 FBtr0078062 3 1 1 84 2L 475103 475123 GCTGGAGACTCTACTTAAGTG 57 475168 475241 TGAGGATTTACCAAACTGCT 57 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733 3 1 3 192 2L 74558 74906 GGAGGTTTGAATGAGGCCT 59 75121 75139 GTGGATTAATGTGGAGCGC 59 NA Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 2 2 2 68 2L 139677 139748 TTTAAAGAGTTCCGGCTGG 57 139627 139645 CGTCATAAAGATTGCGTGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 2 2 3 80 2L 199735 200131 GCCAGTCTGAATGATTCTACG 59 200171 200191 ACCTCGCATTAAATGATGCTG 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078049 1 1 5 131 2L 344479 344583 AACAAGAGTCTCGAGCCTG 59 344678 344696 AGTTCTGCCATCCAGACTG 59 NA Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918,FBtr0114554 3 2 2 60 2L 1517873 1517891 GAACATCCGGCAGTATGAC 58 1517831 1517854 CTTGAAGTTTATCTCCTGGTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 2 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938561 1938580 TTGATCCATCCAAGTTGGCT 59 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 3 5 5 81 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938581 CTTGATCCATCCAAGTTGGC 59 NA Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 2 2 2 80 2L 2143971 2143990 AGAGCTAAACCAGGAGTTCG 59 2143840 2143929 TTGAAGCAGCCTATAAGGGA 58 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077831 3 1 2 154 2L 2152457 2152674 TTTAAAGTGGGCTTTGCTGAC 59 2152790 2152808 GTGGTCTCCTTTCGTTTGC 59 NA Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 2 2 2 85 2L 2368137 2368155 GACTCTTTGCTAGTGGCTC 58 2368204 2368324 GGAAGTGATCTGAGTGCTG 58 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 2 4 4 60 2L 2768915 2768934 AAATCAGTACTGCCTCAACG 58 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 2 4 4 224 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882296 2882314 GATTATCCGCGAAGGAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 3 3 3 83 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336330 3336350 AATAATAGGCGGATAGTCGGT 58 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 1 3 3 81 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336332 3336350 TAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 2 2 2 94 2L 3807047 3807142 ATGGAAACTAGTGTTGCTGG 58 3807199 3807217 TGGTCGTACATGAGATGGG 58 NA Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 1 2 2 80 2L 3865417 3865501 TTCCGCATCATCAAGAACAC 59 3865544 3865562 TCGAATGGTCCTAAACCCG 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 2 4 9 80 2L 3884509 3886993 AATGAATCAGGAGTCACAGG 57 3884448 3884466 AACAGTTGATTGCGTTTCC 57 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 1 5 6 90 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 3 5 6 92 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307621 4307640 TGATGTAGCACTGAACAACG 58 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 1 2 2 81 2L 4399591 4399669 AGGAGAACAAGGTTAACGC 57 4399714 4399732 TAGAAGGGCGAATTCATGC 58 NA Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079010 3 1 2 138 2L 5055490 5055508 GACTTCAAGACCGATCTGC 58 5055700 5055718 CCTTGGGCATAATGGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0091705 2 2 5 80 2L 5141877 5142007 AATGACAGGATCATTGGGC 57 5142051 5142069 ATGGCATCCATGAGTTCAG 57 NA Drosophila melanogaster 61 CG9029 FBgn0031746 FBtr0079143 3 1 1 264 2L 5886123 5886141 AACATTTGTGGTGCTCCAC 59 5886369 5886387 AGTTTCTAGGAGCGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 3 2 2 84 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892688 5892710 CTAGACTGAACGCTTATAAAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0079224 1 1 2 93 2L 6032919 6033332 GAAATGGCTGTGAGCACAC 59 6032844 6032862 CGCTCGATGATTGGTATGC 59 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 1 2 2 95 2L 6273043 6273061 GATTTGGAATGGGCACAGC 59 6273120 6278690 GTTTGCAGGTTCCGATTGG 59 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 2 2 2 81 2L 6457105 6457351 TTCTTACAGGTCCCTATTATCGG 59 6457392 6457410 TCAACAGTTGGAGCGTAGG 59 NA Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 3 2 2 97 2L 6674206 6674225 ACTGAAACTAGTGGAACCAC 57 6674356 6674375 AGTCGATCCAATACCGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 3 3 3 92 2L 6770400 6770418 CGGACTACGAGATCATCGA 58 6770262 6770347 GTTTGTTATCTGGTGTCTTGGT 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299539 3 1 3 82 2L 7227156 7227174 TCCTGGACGACATAATGCC 59 7225845 7227111 ATGATGATTGTCCTCAGCGT 59 NA Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 1 2 2 80 2L 7823090 7823465 ATGGAGGATAGGTTTATTATCGAGG 59 7823503 7823521 GCCATGACCGTCAAATACG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 1 2 9 91 2L 8226594 8227677 CTTTATTGAAGACGGCAAACC 58 8226523 8226541 AATCCAGGGTGAAGTTGGT 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 2 3 6 85 2L 8284180 8284199 ATTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 1 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 2 3 3 62 2L 8440883 8440901 TCTCTTCGAGCCAAAGGAG 59 8440925 8441037 TCTTTGATAATCTCCTCCGGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0112846 1 1 4 142 2L 8690241 8698856 CATTATGGAATCGGAGAGCC 58 8690118 8690136 TCTGGTTGCTACTGTTGCT 59 NA Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 3 2 2 95 2L 9055329 9055347 GAATGCTTCACAGAGGCAC 59 9055153 9055272 GGCTTCCACTTTGTACTTGTG 59 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771 2 1 4 116 2L 9162696 9163300 CTTAAGTTTCGAGAGCGGG 58 9163380 9163398 GAGTCCACCATTATTCCGG 57 NA Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 3 2 2 81 2L 9611430 9611448 AGCAAGGTTCTTAAGCGTC 58 9611493 9611570 TGCCACAGGCATTATACTG 57 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 2 3 3 80 2L 9911765 9912136 TTTGACACAATGGCCATCC 58 9911703 9911722 GTTCTCCCTTAGGTATCGCA 59 NA Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 2 1 1 95 2L 9938625 9938643 TTCTCCCAAGGGACATGTG 59 9938490 9938508 ATCAGATCCTTCTCGTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 2 5 5 80 2L 10296849 10296947 GTTTCTAAAGCTAAGCTCGGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 2 8 10 80 2L 10806032 10806052 AGCTACAGAAGGATCAAATCC 57 10805731 10805990 CCTGCACATATGTCTTCGG 58 NA Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 1 2 2 116 2L 10843819 10843840 GTTCACCAACAATGATCTTCTC 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 2 4 4 101 2L 11258906 11258990 GAATACATTCGGCATGGGC 59 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 3 1 2 92 2L 11790071 11790089 GGTTCCTCATATTGTGGGC 58 11790202 11790378 AAATCCATAACAGAAGACTCGC 58 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089573 1 1 3 89 2L 11987378 11987704 ACTCGGATAGTTCCGACTG 58 11987307 11987325 GATTGGACGATTCTCTGGC 58 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0080286 1 1 2 84 2L 11991444 11991462 TTATGAGTGCGAGAGGAGC 59 11991509 11991583 TTCATCGGTATCTGGGTCTG 59 NA Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 2 2 2 85 2L 13354152 13354170 AGATCAGGCATGAGCTTCC 59 13353818 13354104 TCGTCGATCATGAAGACCTC 59 NA Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 1 1 1 254 2L 13457651 13457669 CATCGGATGATGTTGCCTG 59 13459935 13459953 GATCAGAGCCTCGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 3 2 4 97 2L 14639763 14688477 GAATGCAATAGGCGAACCT 58 14636101 14636119 CTAAAGTCCCAATCTGGCG 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 1 2 3 80 2L 14846490 14846806 TCGGAATGGTACTTTGTTAAGG 58 14846431 14846449 CAACTCCCAGTTTGGTAGG 57 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 2 3 4 80 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313385 16313403 AACTGTCATGGGATTGCCA 59 NA Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 2 3 3 80 2L 16665272 16665351 ACGACAAGTGGTCTCACTG 59 16665210 16665231 AACCGGACAAATATTCTTGCTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 1 4 16 103 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 2 3 16 80 2L 16779140 16779159 AGAAATGCACGAAGGTTCTG 58 16779199 16780559 GGAAGAACACCTTTGTGTTACC 59 NA Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0080922 2 1 2 80 2L 16870940 16870961 GGAAGAAGTGAAAGAAGGAGTG 59 16877499 16877519 GGTTTCCTTTAGGATGTCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 2 2 2 83 2L 18712239 18712257 GTGATCTATGCCAAGACCG 58 18712096 18712192 GTCGCGATAACAGATCACC 58 NA Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 1 2 2 106 2L 19056065 19056262 AGCACGATAGTGTCAACGA 59 19056330 19056350 CTTGACTCGATGATTGTGTCC 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081213 2 1 6 80 2L 19410631 19411544 ACGTCTGGATGCTCTATTAGC 59 19410571 19410589 ACAGTTCCATATTGCGGCT 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268 2 1 7 61 2L 19577188 19577207 AAACGAAGAGCTAAATCCCA 57 19571728 19571746 TTGGCTCTTCTCGTTTCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sick FBgn0260966 FBtr0301718 3 1 4 88 2L 19929343 19950416 CTGTCAACCAATGTAAGTTCAC 58 19950465 19950483 ATTTGGCTAATGGTGGCAC 58 NA Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 2 2 2 104 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054951 20054969 CCGGAATTTCGTACTGCTG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085914,FBtr0085915 3 3 5 88 2L 21671385 21672301 AAGTCGCAAGAACATGTCC 58 21671315 21671333 CTTCGTTGAAGCTTCCCTC 58 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 3 3 3 92 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759241 AAAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 2 3 3 83 2L 22820431 22820454 CAAAGGATATTGTGGTAGCTAGTC 59 22820493 22831522 TTGCCTCCTCAAATTTACTGTG 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 3 5 5 80 2R 19469 19547 TGTGTAATCACTTCAGTTGAGG 58 19585 19606 TAAATCAAGGAGATCGTACTGC 58 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 1 5 5 80 2R 19474 19550 AATCACTTCAGTTGAGGTGG 57 19590 19611 CAGTCTAAATCAAGGAGATCGT 57 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 3 3 5 171 2R 614798 614818 TCACAAATTCTTGACGTCAGC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089753 1 1 6 136 2R 1009143 1009285 ATGTCTATGTATAAGGGTGGTCG 59 1009029 1009047 AGACGTTCAAACTCCCTCG 59 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 2 2 4 91 2R 1328568 1334051 CGATGAAGTTCAACAACCCA 58 1334105 1334123 AAGAATCAGGAGAACGGCC 59 NA Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 2 2 2 99 2R 2655059 2655638 ATTGCGCAAACCTTCTCAC 59 2654978 2654996 TATGCTGGTCGACAAGTGG 59 NA Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 2 2 2 88 2R 2699511 2699529 CCATGAGAACTGTGAGCAC 58 2699578 2700296 CTATTATCGTTTGCACATTGGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111085 2 1 59 80 2R 3237931 3237949 TATATTCGCCCAGTGGGTC 59 3236471 3237888 CTTGTACCATCTCATAGCGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111079 3 1 59 93 2R 3236477 3245737 CCAGTACCCATTAACAGATGG 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111060 3 1 59 83 2R 3226959 3226979 CTGGAAAGTATAGTTGTCGGG 58 3219874 3226914 ATCTGGGAGGTACGTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 3 3 59 82 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241373 3241393 CCATGGACTCCACAATATTGG 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 2 5 5 80 2R 3371066 3371168 TGGACTTTATGTGGGATATCG 57 3371006 3371024 AAGTGCGATCTTTCTCGTC 58 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911 2 1 3 95 2R 3478918 3479017 GTGGGATCCCAAGGAAGAG 59 3479075 3479094 CTGACCGTCGTTGATTTCTG 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 3 2 3 103 2R 4505872 4505891 TCTGGTGCGAATTGTATTCG 58 4505957 4506032 TATTGCGAACGTAACTGCG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 1 4 4 105 2R 4645019 4645095 CCAAGGAGCTCAATGTATCC 58 4645163 4645181 AAGAAGCGCAGATTCTTGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 2 5 5 80 2R 5066160 5066178 GTTGGTTTGAGACATCCGC 59 5066037 5066122 CGTTGATGAGTATCTTATTCACGAG 59 NA Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 2 1 1 61 2R 5283452 5283470 AAATGGACAGCACATTGGG 58 5283345 5283369 CATATTCGTGGACATACTGATTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 3 2 2 98 2R 5474093 5474165 GGATATCGCTGCACAACTC 58 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 2 1 1 130 2R 5704950 5704968 AAAGTGCTTCTATGTGGGC 58 5705193 5705211 ACGTCACGTAGTGTACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 3 2 2 82 2R 5772394 5772475 TACGGCAGGTCTATTCTTACG 59 5772332 5772352 GCATAGTATCCAGACTGTGGA 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088446 3 2 5 194 2R 5806556 5806960 CGGATTCAGTTTATCCATCGG 59 5806267 5806285 CAATTGTGGGCGGTATGAC 59 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 2 2 2 81 2R 5970986 5971085 CAAGGAAGTATGGGCTACCA 59 5971129 5971147 GCGTTTGAAAGTGTCCCTG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993595 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089361 3 1 26 95 2R 6419606 6419624 CATATGCAACATGGCAGCA 59 6380076 6419549 GGATCGGATAGATGTCTTGGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 3 2 26 118 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408767 6419548 TAGTCGTACTTCAGGTCTTGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089348 2 1 26 94 2R 6403147 6403347 CATATCAGATATGAATGTGGTGGAC 59 6403077 6403095 TCAAGGTGTCGCTTTAGGT 59 NA Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 3 2 2 112 2R 6628680 6628757 AGTTTGGATGATGACTTCCTG 58 6628588 6628606 AAGATCCCAATCACTTGGG 57 NA Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 3 2 2 92 2R 7294170 7294188 CGAGGAGCTCTTAGTGGAG 59 7294243 7294317 ACCACAGTTCTCATGAAGCA 59 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089668 3 2 4 92 2R 8191120 8191138 ATTGTTGCGAGCCAATCAG 59 8190979 8191070 GGCCCTAATGTTATTGAATATAGGG 59 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909 1 1 2 82 2R 8255913 8256260 AATGAAGGCAAGTCTGGAC 57 8256305 8256324 GGGAAATAACCTTGTAGCGA 57 NA Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 3 1 1 64 2R 8264451 8264470 TACCTCAAGAATCCAGGCAC 59 8264604 8264622 GAGGTGTACGAGAAGGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 2 3 6 85 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548625 8548643 TGGACAGGATGACGATCAG 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0087879,FBtr0087877,FBtr0087875 2 6 8 182 2R 8558844 8559069 CGGATGAGGAAATCTGCAG 58 8558680 8558698 CTTATAGTCCCGGCTTGGT 58 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644 1 1 2 136 2R 8622497 8622515 ACATACAGATCTCGCAGGG 59 8622614 8634122 GCATTGGCTCTTATCACAGC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 2 5 12 80 2R 9310225 9326126 GTCTCCTGAATACCTATGACG 57 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087679 3 1 2 137 2R 9460026 9461300 TTCAAACTGATGCAGAGCT 57 9459907 9459925 GATCTTCGCGTCATATTGC 57 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 2 4 4 112 2R 9717360 9718064 CTGCATACAAGTGACCACTG 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 2 2 2 116 2R 9741672 9741690 CTAAGATCTTCGCTAGCCG 57 9741378 9741396 CGGTCTTGATGTACTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 2 3 15 80 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769988 9770009 GTAACCCATTTCAACAGATCGT 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087573 2 1 2 80 2R 10121837 10122207 ATCGAAGTTGCCAAAGATGAC 59 10121777 10121797 CTTCTTACGACTCTCATCGGA 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 2 3 4 80 2R 10641389 10641505 TGATCACGAGAAAGCAATGAG 58 10641329 10641347 CGATTGTGTTGGATCTCGT 58 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 1 5 5 80 2R 10790219 10790299 CGACAGTAATGGCAACACAG 59 10790158 10790181 TTAGAATCCAGCAGTATGGATACC 60 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 1 2 2 80 2R 11109920 11110009 ACGCTTTCAAGACATTGCT 58 11110053 11110071 ACTTTCAGCGACTCTACGT 58 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087369 2 1 2 102 2R 11136980 11141560 CCAGACCAGCATCATTGTG 58 11141626 11141644 GTTTGTCAGGGAGCATCTG 58 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777 1 1 5 137 2R 11447100 11447118 TATACCGCCGTATTTGGTG 57 11447219 11449329 ACATTACGATCATGTCGGC 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 2 5 7 94 2R 11551927 11552825 GGAATTTGCTCCATAGACGAC 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 2 4 4 80 2R 11748024 11748113 CCCATGTGGTTAACAATGCC 59 11747963 11747983 TCAGGGATTTGATCTGATCCG 59 NA Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 1 2 2 98 2R 11900046 11900064 TAGTGCGTTACCTCTTGGA 58 11900184 11900202 GTTTCAAGAAGGCAGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 3 2 5 80 2R 12020078 12020099 ACCTTCCTTCATCTATCTAGGC 58 12020138 12020351 CCAAACTTGTACGAGATGTCG 59 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 3 3 3 103 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471728 12471746 AGATCCGAAAGATCCTGCT 58 NA Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 1 2 2 122 2R 12473800 12473818 AAGATCCTCAGCTCTGTGG 58 12473904 12473922 CATCGAGGAGAGCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 2 3 3 80 2R 12541203 12541223 CACATTGATTACGACGTACAG 57 12541077 12541164 TAAGCCCGAATAGAACTTATCG 57 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 2 2 5 82 2R 12566524 12566546 GTATCTGGACAACATTTATCCCG 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 2 2 3 169 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752378 12752397 TACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 1 2 2 60 2R 12951490 12951511 CAGGGACCATACATTCTATTCG 58 12951773 12951791 CCTCCACAATGGTAGTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 1 3 3 81 2R 13563331 13563423 CGAAATCCAGGCCATTAGTC 58 13563269 13563287 GGCATTCACAGAGGTTGTG 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 1 2 4 80 2R 13619710 13619730 TAAGTACATCGACATGTTCCC 57 13619769 13619859 CGGATATAGTCCAATAGTTCGT 57 NA Nonspecific Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 1 3 7 97 2R 13715433 13715451 TCTAACGGTGGATTTGCCA 59 13715508 13715851 CCGTATAATCAAAGGACTGTTGG 59 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 2 2 4 82 2R 13755839 13755857 AGGAGGTGCAATCTGATGG 59 13755048 13755794 GTCATCTTCGTCGGAAACTC 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 2 2 8 96 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312528 14313478 AACTCAACGCTTTAACGTTCTC 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086690 2 1 8 120 2R 14311137 14311156 CACGTTCATAGACTTCTCCA 57 14311238 14311648 CAGGTTGGCTGTATTATCGA 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0301148 3 1 8 163 2R 14309051 14311643 GGAGGACCTTTATAATACAGCCA 59 14311840 14311858 TGATCTCTTCCTCAACGCG 59 NA Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086712 1 1 2 84 2R 14512322 14512342 CTCCATTACTGGACACTACAC 57 14512202 14512277 CTTTGCCATTCTGTTGTAGG 57 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923 1 3 4 158 2R 14520828 14520846 GTACGTACAGTCAACACCA 57 14520624 14520707 CATAACCTGTCTGCATTTGG 57 NA Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970 2 1 2 108 2R 14656383 14656401 GTAGTCCACCGGAATTGAG 57 14656751 14656952 TCACTCAGTCCATTCTTGTC 57 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631 1 1 2 98 2R 14712064 14712216 GTTCAACGACGACATGCTG 59 14711984 14712002 CCGGTGTAGGTGTAATCGA 58 NA Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 1 2 2 80 2R 14865374 14865395 CGCCAATTCGCTATATTCTCTG 59 14865433 14865529 GGATTGAGACGGAAATATTCGG 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 3 5 6 82 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0301882,FBtr0114605 3 2 6 134 2R 15319735 15319817 AGAATTGCTAAGATCCTGCTC 58 15319621 15319639 GTCATAGGTCGAGAACTGG 57 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 1 4 6 90 2R 15319744 15319818 AAGAATTGCTACGGCAGAG 57 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 3 2 3 97 2R 16215632 16215845 CATAACAGATCCCTCATTACCC 58 16215901 16215921 TCTTGTCCCAATAATCGTTGG 58 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 2 2 3 97 2R 16215631 16215844 GCATAACAGATCCCTCATTACC 58 16215900 16215920 CTTGTCCCAATAATCGTTGGT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 1 4 15 147 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 3 4 15 149 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910961 16910979 TTGTCTAGTGGTTGCTCCC 59 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 2 3 3 80 2R 17059014 17059035 GGTAAATGTTACGGACTCACTG 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 2 5 5 200 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546236 TTATCTCCGTGTTCCTCGTG 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 3 2 2 74 2R 17557067 17557085 TATCTACCAGACGCATCCA 57 17556955 17556973 GCCTATACTGCGGTATGGA 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928,FBtr0300929 2 2 2 98 2R 18001247 18001265 GTTTGGAAACTTGGAGGCT 58 18001377 18001396 GTGTTTAGAGTGCCATTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 1 2 2 100 2R 18183292 18183367 ACGACGCATACGAGATCTC 59 18183431 18183449 CATCTTCGTAGGAGGGCAG 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849,FBtr0071852,FBtr0071851 3 3 4 129 2R 18188500 18195722 CTTATAGAAGATAAGACGCCAAGAG 59 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 3 4 4 173 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295107 18295125 ACTTTGTTCGGCAGTACCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 3 1 1 69 2R 18535711 18535729 AACTAAACCGCATTGTGGG 58 18535600 18535621 GGCACATAGTAATTAAAGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 1 8 13 140 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 2 2 2 114 2R 19574386 19574559 GGAAGCTGTACGATGTTCG 58 19574637 19574655 AGTAGCTTCGCTTCGAGAG 59 NA Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 2 2 2 60 2R 19791749 19791834 CTGTCGCTTATTGAAAGACTCAG 59 19791851 19791872 TGTAGTCTATGCATATCACGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 3 1 3 110 2R 19858072 19858092 ACAGTTTCCTGTACAGGAGTG 59 19858220 19858241 CGTGTTTGGTATTACTTGTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 1 2 2 162 2R 20422601 20422674 ATCGATTCAGGACACCACC 59 20422457 20422475 TAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 3 1 1 62 2R 20556264 20556285 CTGAGAATATACAAGAGCTCGG 58 20556167 20556185 TCCAATGGGTAGTTGGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 2 5 5 81 2R 20770530 20770606 CTTCCTGCAAGTGATAACGA 58 20770649 20770668 AAAGTTCACTAGGATAGGCG 57 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 1 7 8 116 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878692 20878710 CATCCTGGACCGATGAGTC 59 NA Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 2 1 1 130 2R 10177916 10177934 AACTGGAATCTGGTTTCCC 57 10177768 10177789 CCGTGAACGTGAATAATATCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 1 3 4 86 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510694 10510712 AACAGAAAGTGGCACAGGT 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 2 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 2 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 2 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 2 5 6 82 3L 352341 352362 GTATCTCGAGTTATCCGAAAGG 58 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 3 4 6 80 3L 982229 982248 CTGCATCTCTATGGTCTGGG 59 982288 983866 GTCGATCATTTCCTTGATCAGG 59 NA Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 1 2 2 80 3L 1557837 1557855 AAGAAGCAGCCTCAATCCT 59 1557701 1557796 GTTGGTATGTAACTCACTGGAC 58 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 3 5 5 100 3L 1635218 1635236 TGATGATCATCATGGGCGT 59 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL23A FBgn0026372 FBtr0072805 2 1 1 264 3L 1668597 1668615 AAAGCCAACCGAGAAATCC 58 1667977 1667995 CTTCTTGGCATCCTTGCTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072772 3 1 2 83 3L 1748359 1748435 TCAGTGCTATTTCGTGTCAC 58 1748481 1748499 CAGAACTAGCGGATGAGGA 58 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072779 1 1 3 130 3L 1798834 1798855 CATTTGGCATTCCATTTCAGAG 58 1798946 1799020 TTTGTCCTAAATGTGCCGT 57 NA InUTR Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 3 2 2 121 3L 2373060 2373139 ATGTAACATTGCCCAGGGA 59 2372957 2372975 CAGAAATCTGCGGAAACCG 59 NA Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 3 2 2 211 3L 2587882 2588095 GTTGTCAAGGACATCATCCAC 59 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 2 2 2 106 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183796 3183947 TTATCCAGCAAATCCCGCT 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 1 4 13 80 3L 3516816 3552793 AATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0113135,FBtr0073266 2 2 6 186 3L 4133819 4134469 TCGACTAATCCAGAAGTGGA 57 4132204 4133558 CTTTGGACGCTTGAGAGTC 58 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 3 4 4 95 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289165 4289258 GTAAACCAAGTCATCCGAGC 59 NA InUTR Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 2 1 1 67 3L 4487525 4487543 AGAGCTACTTTACTGCGGC 59 4487419 4487437 ATACCCATCGGTGAAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301097 1 1 4 87 3L 4563896 4578765 ATACGTAGACTTGCGGACG 59 4578816 4578834 TTATCACAAGAGCCACGGA 58 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 2 3 3 94 3L 5338822 5338840 CTTATCCGGATTGGGTGCA 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 2 2 8 80 3L 5669985 5670004 AATTGTTCAACAGGCTTCCA 58 5670046 5697041 CGATCATCGTCCGAAATCTC 58 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 3 2 2 106 3L 5798501 5798579 CTGAGATCCTATGGTCGGTC 59 5798648 5798666 AAATTCAAACCGATCCGCC 59 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299616 3 1 2 113 3L 5796513 5797327 TAAAGAAGTAGTCGAGCGC 57 5797403 5797422 ATGGGATGAACATACTGCAG 57 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 1 3 3 82 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088583 AAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299551,FBtr0299549 1 2 9 106 3L 7156267 7156859 TAAGCACAGCATCATCTACCA 59 7156181 7156199 GATGATACCTGGAGCGACC 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598 1 1 5 102 3L 8067833 8067851 GCAACCGTTGAACAAACCT 59 8067915 8086168 AGTCTGTCATCTTGACAGTGG 59 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 2 2 2 80 3L 8082830 8082850 GCTAAGGTCCATGTGTTTGTG 59 8082714 8082794 CAAGCTAGTAGTCGTATTACTTCCT 60 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 3 2 2 68 3L 8115189 8115207 GTACCTGGATATGTGCTCC 57 8115294 8115312 AATATGGTCAGCACTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153 2 1 2 104 3L 8344384 8344402 GATAATGGTAGTGGCGGAC 57 8344470 8344875 CTTGTACTCCTGATTGCCG 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675 1 1 5 131 3L 8346683 8346701 AAGAACAGCCCAGTACCTC 59 8346518 8346589 AGTGGGACTCACAAATAGCC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 2 3 13 177 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631265 TACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273291,FBtr0273290,FBtr0273286 2 6 7 82 3L 8899798 8899927 GAGGACCTGATGGTAATCCG 59 8899735 8899756 ACCTGCAGATAGATAATAGGCG 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 2 4 7 80 3L 8904067 8904136 AGATCGCGTTTAATGGAACTC 58 8904007 8904031 CAACATAGATCATAGGATTGACAGG 59 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076460 1 1 5 118 3L 9423835 9423853 CTCGAACCGAAATTGGAGG 58 9423934 9428973 TTTAAAGCTGTAGTCGCCTG 58 NA InUTR Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 2 2 2 90 3L 9723674 9723692 CATGGCCATCATTGCTGTC 59 9723837 9723856 CTCCTTCCACTCAGATTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 3 3 4 174 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856553 9856572 AATGATCTCATAGACGGCTC 57 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 1 2 2 80 3L 9886557 9886630 ACATGCGATACAAGAAATGGC 59 9886497 9886516 CCAGATTGTTATCGGATGCC 58 NA Nonspecific Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 1 3 3 172 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687662 10687681 CACAGTATCTCTGTCCACAG 57 NA Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 3 2 2 160 3L 10877957 10877978 GCGTGCAGTAACTTTATATCGT 59 10877744 10877837 TTCATGTTGTCCCAGGACTC 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 3 2 5 122 3L 11219889 11222219 TACCTTTCGAAAGTGTGCTG 58 11222303 11222322 CATACTCGGAGGATTCACCA 59 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 1 4 4 80 3L 11600291 11600309 GGATACAAGCCCGAGATCC 59 11600169 11600250 ATCTTCAAACATGGTCTGTTCG 59 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913 3 1 2 139 3L 12731791 12731877 GAGATTCTTTGAGCAGGGC 58 12731978 12731998 CTTATGTCGGTTCTTGTAGGC 58 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354,FBtr0075950 2 2 2 200 3L 12746676 12746694 AGTGTTTCCTGTGCTAGTG 57 12746434 12746513 TTAACCATGTCTTCACACGT 57 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354,FBtr0075950 3 2 2 123 3L 12746599 12746617 TTTCATCTCTTTCGCGGGA 59 12746434 12746513 TTAACCATGTCTTCACACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 2 4 4 80 3L 12805256 12805274 ACAAGGAGAACGCAAATCC 58 12805315 12805395 GTGTGGGCTTATACGTATTGAG 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 2 3 3 103 3L 12843424 12843609 GGAGAGTACATACTGCTCCA 58 12843674 12843693 GAGGTGAGATAAATCCTGCC 57 NA Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 3 1 1 152 3L 13003078 13003096 ATGAACGATTTACGGAGCA 57 13002872 13002891 GTTTCCGGTTTGTAAAGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 2 5 5 120 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475544 CTGAATGCATTTGATAGCCTCC 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 1 3 5 80 3L 13474165 13474183 CATGGACAACATGTTCCCG 59 13474227 13474323 AAACCAAAGTGTGAGTCGC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100042,FBtr0100039,FBtr0100040 1 3 6 80 3L 14206286 14223279 CATGACTACGATTATAGGCTGG 58 14223318 14223338 CCGATCCTCAGCTATATTCTG 57 NA Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075679 2 1 2 171 3L 14658168 14660374 AAACTACATGCGATGCGTC 59 14660509 14660586 ATTCAGTCGCACATTGAGG 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 3 2 2 248 3L 14744378 14744396 GGCCATCAGATCATAGGCA 59 14742619 14742637 GCTCAATTGAGTTGCTGCT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 2 3 4 80 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505317 15505337 TTTGGTGACATTCACATCGTG 59 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 3 3 4 81 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 1 3 5 80 3L 15857119 15857138 TATATTGGTGACGTCGTCCT 58 15853117 15857076 GTTGTCACGCCTATCATCG 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 1 2 4 107 3L 16404181 16404200 TATCTGTACCAGTTCTCGCG 59 16400451 16404114 ATCGACATTCTCGTATTTCAGG 58 NA Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 2 2 2 98 3L 16567987 16568005 AGAAAGCACCGAAATCGTC 58 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 3 2 4 87 3L 16785598 16785616 AGAATGCCGGATTACCCTG 59 16784779 16785548 TGAACAATCACACGTGATCG 59 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 2 2 2 208 3L 18033742 18033760 TTTACGTATGTCCTCGCAG 57 18034086 18034106 TGAGAATATCCAACTCTGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 3 2 2 137 3L 18106214 18106233 TGCTTACTGCAATAAGCGTG 59 18112923 18112941 GATCAGGGTGATCCTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0074994 3 1 2 96 3L 19269802 19272148 GTCTGCTGACTTCATTCGC 59 19272207 19272496 TGGTAATTATCCTCTGCGCA 59 NA Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 2 1 1 102 3L 20403363 20403382 CTTCGACATCGCTCTATTGG 58 20402672 20402690 TAATATGATCCCGGGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 2 2 2 116 3L 21188722 21188881 CGGATGTGAGTGATACCGT 59 21188624 21188642 GATGCGGCATAAACTGACG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078303 1 1 4 82 3L 21208142 21208160 TCCAACTCCTCATCCATCG 58 21208206 21208484 TGCTGACGATGTTTCAGTG 58 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 1 2 2 80 3L 22062291 22062490 ATTGCTTTGTGTTAGGCGAC 59 22062230 22062250 GTTGATCCAGGATTCCATTGC 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0078496 2 1 2 80 3L 22274820 22274838 GTCGCTCATTGACAACAGC 59 22274879 22275678 TCAGTAAAGTGATGGTAGTCGT 59 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 3 3 3 84 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718717 TATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 3 2 2 60 3L 22857208 22857226 CTTTCTGGTGCTGTTCGTC 59 22857248 22857268 ATGACTACATTAGGCCAAGAC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 1 3 3 84 3L 23741153 23741252 CTGGACAGAACGAATATTGTG 57 23741295 23741316 GGCACATTTCCGAATATTAAGG 57 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 3 2 3 113 3L 23734176 23739299 ATTGGACAGGGATCCTACG 58 23739376 23739394 CATAAGACCAGCTTGACGC 59 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 2 3 3 147 3R 95684 95702 GACAGTAACGGCATGACTC 58 95496 95573 TAGCGTTCATAACCACTGC 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 10 10 80 3R 562838 562911 AAATGAAGTAACGAGGTCCGA 59 562778 562796 ATACGCTTGATCAGAGCCT 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 6 10 106 3R 570265 570283 TAAGCCAGAAGACGACCTC 58 569896 570198 TCAGTTGAGTATCCATATCGGT 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 1 4 19 132 3R 1129894 1138718 AAGAACAGGTCACGTAGGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 2 4 19 134 3R 1129895 1138719 CAAGAACAGGTCACGTAGG 57 1125242 1125260 GAGTCCAAGTCGAATGGAG 57 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078764 3 1 2 160 3R 1324582 1327767 GCTAACAAAGGAGAGTCTGC 58 1319154 1319173 ATCCTAGCTTGATGTGTCCG 59 NA Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 1 2 2 80 3R 1375368 1375386 CGGAAACATAATGGCCCAC 59 1374902 1375327 TTGTAAACACCAATGACTCTGG 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 3 1 1 63 3R 2167825 2167843 GTAATACACATCGGACCGC 58 2168070 2168088 AATGTGCTGCTAAATGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 1 4 4 80 3R 2182251 2182269 TGGTTCGACAACACTACCA 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 3 4 11 97 3R 2724257 2734261 TGCGAAGTCAGTTTGAACG 59 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494 1 1 9 80 3R 2922064 2922083 TGACGGTTTAAGTAGCACCT 59 2921555 2922023 CTTAGTTGGGACTGATGATGC 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741 3 3 4 159 3R 3588102 3588184 TGAGTACGTGGATAACAGGG 59 3588374 3588393 CTTGCTGGTATCGTATTCCC 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 2 3 4 89 3R 3586916 3586934 CAACACGCAAAGTAGTTGG 57 3586987 3587737 TCCTACAACTTCCTTGTGC 57 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 2 3 3 105 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723662 ATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 3 3 3 106 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723663 TATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 1 2 4 80 3R 4612642 4618841 TCAAGTTACACCTGAGATAACC 57 4612583 4612601 TCGAGCGCTGATTTATGTG 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 2 4 4 93 3R 4871946 4872261 CATGAACTTGAACCAGGTGC 59 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 2 2 2 100 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226567 5226585 CTGGTAAACCAGACGACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207 1 2 4 80 3R 5348545 5348566 CTGGCACGAATAATCTTACCAC 59 5348604 5349269 GTTGTGTCTGATCTTGATTGCT 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 2 4 4 81 3R 5592946 5592966 CCCTTCTATGATCACATGTGC 58 5592831 5592903 GACCGATCATGTTGTGCAG 59 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 2 2 4 80 3R 6589613 6589633 CTGTTGCTAATCGATTCAGGG 59 6589671 6589891 CTGGCGTTGATCTTCTAAATCTG 59 NA Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 2 2 2 80 3R 6819262 6819280 TATGCCTGATCATGGGAGC 59 6819324 6837750 GCAGGATTTCACCATCTGG 58 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196 3 1 3 169 3R 7202843 7202861 GGACTACAAGACCTGCCTG 59 7202994 7203742 AGGATTCGCAATGTTTGGC 59 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100462 2 1 4 267 3R 7387975 7387993 CATCGCCACTTCACTTCAC 59 7386731 7386749 CATACTCGGTGGGATAGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082470 1 2 4 80 3R 7614037 7614173 CATGATGATCGAGAGTTTATCCC 59 7614212 7614231 GTGTTAACCACAAGTGGGTC 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 3 2 6 81 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628403 7629449 CGACCATACATATAGTAGAACGC 58 NA Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041 1 1 2 80 3R 7717450 7717470 ATATGTATTTGGCAGGGTCTC 57 7717510 7717598 CTCAACTTCAAAGGTCTAAGC 57 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 3 3 3 63 3R 7777163 7777183 TACCGTAAACGATGTCAATGG 58 7777208 7777456 CACCACAAGCATCAGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 3 3 3 102 3R 7792838 7792919 CAGATGCAATCCCTGAATGC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272 1 1 2 80 3R 7797685 7797703 CATGGTTAAGACGCGACTG 59 7797744 7797820 TAAGGCAATAGAGTTATGCTGG 58 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082542 1 1 3 104 3R 7922731 7932873 TGGGATACAAGTAGTCACCTG 59 7932939 7932957 GTCGTAAGCTGTCCCTCAG 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 3 5 5 75 3R 8270796 8270814 CCTACCTCATGGTCACCTC 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 3 2 2 80 3R 9125276 9125296 GATGAAGGATAAGCTTGTGGG 58 9125336 9125490 TTCGTCGTAGAAATGGTTCTG 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 1 4 6 134 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9203264 9203282 CTCAACCAGTTCTTCCACG 58 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 1 3 8 92 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 3 3 8 93 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488768 9491187 AATCCTTGAGATCCTGCCA 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 2 2 5 81 3R 9892808 9892826 GTGGATGGTCCAGAATGTG 58 9892870 9905082 GTGACGTATGGAGTTCTTCC 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 1 5 5 80 3R 10090935 10090956 CGATAACCTTGTAGTTGATGCC 59 10090816 10090896 GAATAGCAATTCGGCTCACAG 59 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 2 3 3 112 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452026 TCAAGGAATACCTTTAGCACAC 58 NA Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 1 2 2 83 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707624 10707643 CGATCGATGATTTCCGTGAG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 2 7 13 147 3R 11122419 11125005 AAATACGATGAGGTTGCCC 57 11126515 11126533 AGACTTCCAGGGACTTCAG 58 NA Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 3 1 1 111 3R 11165418 11165436 ACAAGTCTGGGATTGAGCC 59 11165232 11165250 TGGACACGGCATAGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14867 FBgn0038333 FBtr0083095 2 1 1 61 3R 11207232 11207250 AATACGCAATCTGAGCGGT 59 11207275 11207293 TCGACTGCAGATTCTCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 3 4 4 80 3R 11217397 11217416 TCCACGATGAGTCCAAATCC 59 11217456 11218027 ATCACCAAATACCTTGATCGTG 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 4 5 196 3R 11723423 11723506 GGAGCTAAGTGGAAATGCT 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083215,FBtr0100595 2 2 3 191 3R 11827112 11827475 CCAATTCGAGACGCTTGAG 59 11827630 11827901 GCTTGCGTTTCTGAATGGT 59 NA Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 3 2 2 108 3R 12030246 12030624 CAACTACAAATATGAGAACGGC 57 12030159 12030179 TCCCTTCTTCAAGTATTCCAG 57 NA Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 2 1 1 146 3R 12303248 12303268 TCATGCGATTCATCTAGTGGA 59 12304553 12304571 CTCTCGTACAGCATTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333 1 1 6 84 3R 12460097 12461279 CGTTCAAGGAGAATGCTGAG 59 12461326 12461344 ATGTCGTCCAGAACTGCTC 59 NA Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 3 1 1 121 3R 12978126 12978144 TCTACAAGGGCGACAATCC 59 12978284 12978303 TGAGGATCAGTGGTTGACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 1 3 4 91 3R 13044801 13044890 ATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 1 5 5 80 3R 14587368 14587390 GTTTGTATCCAGGGAACTATCTC 58 14586863 14587330 AAAGTTGAGACGTCCATTGTC 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 1 5 5 103 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 2 4 4 81 3R 15444447 15444530 CATGAACACAGAGCTTAACTGG 59 15444387 15444407 CACGGAGCCAATAAAGAACAG 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487,FBtr0100457,FBtr0089484 3 5 5 80 3R 16366166 16366255 CATAATGTCAGAGATCCAGTCG 58 16366107 16366126 GATGATTGACCGGATAGGCT 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 2 2 4 119 3R 16894631 16894649 AAGGACAAGACGCTGATCC 59 16894732 16896454 GAGGTCGTCCTTGATCCAG 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 1 5 5 86 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894893 17894911 TAATCTTGCAGCCGGTCTC 59 NA Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 2 2 2 88 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128542 18128561 AATACACAATGATGGGCAGG 58 NA Drosophila melanogaster 61 CG34131 FBgn0083967 FBtr0110878 3 1 1 60 3R 18188644 18188665 ATAATGATAAGCCAAGTCGGAC 58 18188745 18188764 GATGGTCTAGAATGCGAAGC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 1 2 2 84 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198001 18198019 TCTTCTTTCCGACCTGCAG 59 NA Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 1 2 2 174 3R 18205912 18205987 CGATTCTGAATGGAAGACAGAC 59 18206122 18206140 TGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 1 2 3 99 3R 18372499 18372517 TACGACGATGAGTTGGTCG 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 3 4 4 80 3R 18614231 18614310 GTTTCTATGCGGATCCCAG 58 18614353 18614372 CTATGTCCTCCAGATTGCTG 57 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 3 3 3 116 3R 19008675 19008693 CAGACACGTTTCAGTTCGC 59 19008772 19009174 GAAGATGTCCTGCAGATAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 3 4 5 81 3R 19802105 19802127 CAAATCGGATAAATCGGAGAAGG 59 19802162 19802242 GAACACCTTGATCATCTCTATATCC 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 2 4 4 70 3R 19815428 19815506 ATTGGAGCAGACAACTGGA 59 19815376 19815394 GTTGACGGGAACAAGTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0100518,FBtr0100519,FBtr0100516 3 4 7 123 3R 19982893 19982993 GTTTATATCGTGTCGCCCG 58 19982788 19982808 ATTGTCAGAAGGAACTGTCTG 58 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 5 6 81 3R 20045867 20045948 TAGAGATTACTGGCTGCGT 58 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 2 2 2 86 3R 20196180 20196198 GCCATCTGTGATAGCAAGC 59 20196244 20196327 GGTTGGTAGTGTAAACACAAGTC 59 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084615 3 1 2 80 3R 20195902 20196026 TATGATCCCGAGGATATGCG 59 20196066 20196087 CTTACTGAAACCATCAAAGTGC 58 NA Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 1 2 2 80 3R 20340085 20340103 CTGTATGTGCCATCTGAGC 58 20339966 20340044 CAGAGTTACTTCATAGTTGCCA 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 2 2 3 144 3R 20864227 20864382 AAACACAGCTAAATCGGTCG 59 20864000 20864018 GTTGAACGGCGGATATTGG 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 1 5 6 87 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 3 1 2 81 3R 21419246 21419321 CGAAGTACCTCAAGTTCATGAG 58 21419186 21419204 GCTGTGTCACCTTGATTGG 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 2 3 5 90 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711698 AAGAACATGATGAGCAGTGAG 58 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085039 3 1 3 145 3R 22543736 22544055 AAGTGGGAGAACTCCTCAG 58 22544163 22544182 TTGGGATCTAGTATTCCGGG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 1 3 9 94 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699634 22699652 CATTGGATACGCCAACAGC 59 NA Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 3 1 1 191 3R 22851771 22851789 GCAATCTTTGCTCTAGCCG 59 22851528 22851546 GTAGAAGTTCACGGGAACG 58 NA DesignNoJunction Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 3 12 12 161 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273192 3 1 2 113 3R 23143037 23143170 GTGTGCAGGAGTTTATTCGT 58 23142943 23142961 TTATTCTCATCGCCTCCCG 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112583 2 2 3 188 3R 23909326 23909344 ATCAGCAGGGATACATGGG 59 23910334 23911142 AGAGTAGAGGATAAACCTGGG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299744 2 1 13 116 3R 24720769 24726550 CGACGTGTGAGTATAATTTCG 57 24726628 24726646 TGTAGCGGTATTTGTGCTG 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 3 9 10 187 3R 24957537 24957856 AGTTCCGAGATCTCAATCCC 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 2 5 10 117 3R 24959139 24960776 ATTTGAAGCTTGGCTTCGT 58 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 1 3 3 80 3R 25073569 25073652 TCTTACCAAATGGATCTCGGT 59 25073509 25073527 AAATCGGGCTCATCAAAGC 58 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 2 4 4 166 3R 25617433 25617517 ACCGATACTTCAAGTGCCC 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 1 2 2 80 3R 25648468 25648553 TGTGACAGGATACGTCTTCTC 59 25648595 25648613 TCCAAGCAATCAGTGAGCA 59 NA Drosophila melanogaster 61 Takr99D FBgn0004622 FBtr0301656,FBtr0085507 1 2 2 80 3R 25777671 25777689 GGAGAATCTGACATCCCGG 59 25777545 25777630 ATCGATTTCTGGGTATCATTGC 59 NA Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 2 2 2 83 3R 26004019 26004037 AAGATGTTCCGAAACGTGC 59 26004084 26004168 GATCTGGTACTCTCCAGGC 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085693 3 1 4 80 3R 26275673 26279160 ATAAGGATGAGTCTCCGTCG 58 26275612 26275630 GGATGGATGCGTACTTCAG 58 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 1 2 2 80 3R 26709833 26709912 CAAGTACTACAAGATCTGCTCTG 58 26709775 26709794 TCAATATAGGGTCGTTTGGC 57 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960 3 1 4 83 3R 27006811 27006829 TGGAGATCAACGTCGTGAG 59 27004473 27006766 TCCTCATGTCGTAGACATTCG 59 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 3 4 4 115 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 3 2 3 80 3R 27663681 27663703 CATCTGTATCAATCAGTAGTGGG 58 27663742 27665613 CAATTGATAGGGCTGTTGCA 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 1 4 4 82 4 596941 597612 TAACGGAAACGATGACCAC 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246 1 1 3 80 4 906428 906448 AATATTGACAGTATGCCGGAC 58 904259 906386 GGCCATTGTCTTGAGAACC 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 1 2 5 80 4 1040635 1042881 CATGTGTTCTAACGAAACTGC 58 1040575 1040594 GGGTTTCTCCTCCTAAAGGT 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0089328,FBtr0301563 3 2 8 136 4 1128953 1131407 CAATCGGACCTTCCATTGG 58 1131504 1131924 GTAGGACGAATTTATCAAGCCA 58 NA Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 3 2 2 80 4 1224349 1224368 TCGTTACAGTCTACCTCAGC 59 1224410 1225002 GTCGAATGATGGTAGCTCAG 58 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 2 4 4 100 U 1179118 1179137 AATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578 2 1 8 117 X 166467 166485 CATCGAGCCAATTACGCTC 59 165634 165840 TTTGCGTGGTGTAATGTGG 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578 3 1 8 120 X 166470 166488 CTGCATCGAGCCAATTACG 59 165634 165840 TTTGCGTGGTGTAATGTGG 59 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 2 4 4 87 X 423499 423517 AGTTCGCCAAGAACTTGGA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 3 1 1 86 X 925022 925040 CACCAAGGCTATCATGCAC 59 925148 925167 GTATTCACTCCGGGAATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070240 3 1 3 81 X 1189966 1190403 GCATGCTGCGATTGTACTC 59 1189903 1189924 ATATCTCTGTGTTTGCACTGTG 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515 1 1 2 97 X 1347844 1347917 ACAATGCTCTGATAACCCAG 57 1347977 1347995 ATAGAGAAGGGTGCAGTCC 58 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 3 2 6 173 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387281 1395833 GTGTGCTTAGAATTGCCGT 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0070451 1 1 8 81 X 2416441 2417448 TGAATCTAGTGATATCGAGGAAGAG 59 2416384 2416402 GGAGTCATCGCTACCAGAG 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070481 3 2 3 109 X 2608387 2608405 GATTTCCTTACCTCCACGC 58 2608478 2608553 GAACCAGGACCTATGTCCC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 3 12 12 80 X 3228356 3228597 TCGCTTAAGTTCAAACGCA 58 3228640 3228659 TTCGGAAATCTGATTTCCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 2 12 12 80 X 3228354 3228595 CGTCGCTTAAGTTCAAACG 57 3228639 3228657 CGGAAATCTGATTTCCCGA 57 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 1 4 12 121 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 2 2 2 60 X 3465470 3465490 CAAACAGACCGAATTCATAGG 57 3465581 3465599 TCCCATAAGACCTCCAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608 3 1 3 94 X 3771414 3771432 CTGCAGAAACTCACCATGG 58 3771489 3773056 ATCAATGGGTAAGTGTGCTC 58 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 2 3 3 130 X 4554209 4554299 CACAGATCGTGGTGATATCCA 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 2 2 2 97 X 5808426 5808621 GGCAAGAGGTACTACGGTG 59 5808347 5808365 CACTTCTCATCGTCCAGGT 59 NA Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869 1 1 2 131 X 5956056 5956074 CAGCGAATGTTCAGGAACG 59 5956169 5956884 CTGAGTGCGGAACTTTGAC 59 NA Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 3 2 2 84 X 6574457 6574475 CTATACGACGACCACTTCC 57 6574523 6574610 TGCTGATCACCTCATTCAC 57 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 3 3 6 154 X 6681509 6681529 GGATGAGAATAGTCAGTGCTC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 3 3 6 106 X 6680839 6681140 CAAACGAATCGGGTTTCGT 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 1 5 6 105 X 6701674 6702857 CAATTATTCCACGTTTGGGTC 57 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 2 2 2 68 X 6716155 6716236 TGCCAAGAAACAAAGTCCG 59 6716268 6716286 AAGACGAAGGAGGAACAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 2 2 2 141 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 3 2 2 74 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002260 7002279 CTGATTGCCTACGAAACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 3 2 2 80 X 7582478 7582496 ATTGATCAGTGCCGGTACC 59 7582354 7582434 GGTGTAGAAAGCACATGCG 59 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 2 6 6 116 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944208 7944226 CTCGAACTGCTATCACTCG 57 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 1 4 5 80 X 8404726 8406392 TCAATGGAAACGATCCCGA 59 8406434 8406454 TCGTGATGATTGAGCTTAGTG 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 2 4 5 80 X 8404724 8406391 TTTCAATGGAAACGATCCCG 59 8406430 8406452 GTGATGATTGAGCTTAGTGAACC 59 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 3 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466338 ACCTTGTTCAGTTCATTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300000 2 1 2 82 X 8944960 8945079 AAGGATGAGGGACAGAACG 59 8945124 8945143 ACAAAGATGAGCTCCTTGCT 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 3 2 2 80 X 9468297 9468394 GGATGGACCTGGAGTATTACG 59 9468237 9468257 ACAGGCAGATATTCGATCTCG 59 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405 1 1 6 107 X 9544594 9544612 ATAAGGACAGGCAGGAGGA 59 9538388 9544523 ATTGTTTCACAGCCTTGGC 59 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 2 3 3 87 X 9955305 9955323 CAATGTGAGCATACCGTGC 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 3 2 2 218 X 10017033 10017051 CGTCCAGGAAAGTTCATCG 58 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 spri FBgn0085443 FBtr0112689 1 1 4 101 X 10413798 10416843 AAAGCAAGAACAAGTGAACCC 59 10413717 10413735 ATTATTGTTGCCCGTGTGG 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 3 2 10 88 X 10692589 10692661 CGAATAAGGGTGAACTCTCC 57 10692520 10692538 CTTGCCAATGATTCGTCCA 58 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390 3 1 2 80 X 10942620 10942982 GAACTTTCTCCTTAGATATCGGG 58 10943019 10943040 ATCTGGCACAAGGAATATTTGG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 1 5 5 132 X 11029017 11029035 CAAGGACATGCTCATCGTG 59 11027710 11028925 GGCTGTGTATTTGTATACCATGG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073499 3 1 2 86 X 11351723 11351741 CGGCAACGACATACTACTC 58 11351790 11352274 GAAAGTTGGGTTCGGATAGC 59 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 3 2 3 82 X 11494345 11498350 GAGATATTTGACAAGCACGAC 57 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073526 1 1 2 80 X 11583562 11587583 GGAATTTACCGTTGGGCTC 58 11587627 11587645 CCAGCTGGAATAGGTTGTC 57 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 3 3 5 198 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607536 11607554 TACTCGAACTGTTTGGTGC 58 NA InUTR Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0073591 3 1 2 114 X 11818277 11818295 ATATAGCGAGAATCGGCGG 59 11816397 11818202 CTTGAAAGATCCAGTTTGTGGT 59 NA Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 1 2 2 97 X 11885076 11885096 CTATGGATTCTTCTCAAGCGC 59 11884928 11885017 TCTTGTCGCCAGATGAGTG 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 1 4 4 97 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910897 ACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 1 2 2 81 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924721 11924739 GCTCAAATGGAATGCCTGG 59 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558 3 1 2 103 X 12358560 12358579 TATATCCAGCGATCTGAGCG 59 12358645 12359292 CAAAGGAGACGCGTTTGAG 59 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 1 4 4 81 X 12550119 12550138 TGAACTATTGTCGTAGCCTG 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 1 5 5 116 X 13230405 13231548 AACAAATCCAGCCATGGTG 58 13230307 13230325 ATGATCACCTTGGAGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 3 2 2 81 X 13314322 13314405 GCAAGAAGGTCAAGAGTTCC 58 13314445 13314467 CTTATCTCAAAGCGGAACTTCTC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 1 4 4 104 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0112984 1 1 2 93 X 15036823 15036841 ATGATCAGAAGCTGGGTCG 59 15036023 15036769 GTTCGGTTTATATGGGAGTTGC 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0074008 2 3 4 123 X 15232717 15232735 TACTTGGCGGAGAACAAGG 59 15232954 15233674 CTCCGCTGTCTAGTGATCG 59 NA Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 2 2 2 110 X 15411715 15413956 CGATACAGGTTCACCCTCTC 59 15411624 15411643 AAAGGAGCTAGAGATTGGGC 59 NA Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 1 2 2 104 X 15691534 15691554 GGATTTCACATGTCTTTCGGT 59 15691385 15691472 GTGTAGCCTTCTAATATCAGCAG 58 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299949 2 1 3 88 X 15989713 15990567 ATTTAAAGACGACGGAGCA 57 15989643 15989661 CTCACTTAAATTGGGCCCG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215 2 1 5 101 X 16175214 16175232 ATATTTGTTGAGGAGGCCG 57 16175295 16175480 TACCCTGATCTTAAACTCGAC 57 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 3 2 2 124 X 16534126 16534144 GAACAACATCGGCATGGTG 59 16533958 16533976 AAGACTAAGCACTACGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 2 7 7 60 X 16579563 16579581 TGATATCCACGCACATGCA 59 16579425 16579443 AAGTTCTCGTAGTGCACGT 59 NA DesignNoJunction Drosophila melanogaster 61 if FBgn0001250 FBtr0074357,FBtr0301354,FBtr0301353 1 3 4 93 X 16654995 16655013 TGTCAGGCTGGATTCAGTG 59 16652610 16654370 AGTAGGTTTGTCCTTGCCA 58 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 2 3 3 86 X 18095257 18095335 AGATGGTAGGACAACAGCC 59 18095384 18095403 GGTTCTTGTCCATCTGATCG 58 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074580 2 1 2 118 X 18209361 18209624 GGTCGCATTTCTACCTCCA 59 18209261 18209279 ATCAGGCTCAATCCTCGAG 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 2 3 9 85 X 18267160 18267178 ATGCAGAAGGTGGTCTACG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862 3 1 6 80 X 19418187 19422684 CGATGACAAGAAGAATAGGCA 58 19422726 19422744 TTGGAAAGCACATCATCCA 57 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 3 5 5 81 X 19457156 19457177 CATCTCCAAGTACCAAATGCTC 59 19457034 19457116 TTCCTTCCAAATCTTGCACAG 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089642 2 1 2 104 X 20299146 20299164 GTAGACTGTGGATCGCCTC 59 20299004 20299080 GAAACTTAATGTCGGGATCGC 59 NA Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 2 1 1 60 X 21194164 21194182 CATGTTCAATCGCCAAGTG 57 21193154 21193175 GAAGAGTTCGTATTTAACCGGT 58 NA DesignNoJunction Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 3 5 8 84 X 21247627 21247645 GCTAATACGCGCCTATCTC 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CR11386 FBgn0260447 FBtr0299927 1 1 1 60 X 7791978 7791998 CGTCTGTGTATTCTTATGTGC 57 7791739 7791760 GAGTGTATCTTCTTCAGGAGAC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113682 3 1 3 81 XHet 14995 20030 GCCCAACGGTAATGAATGG 59 20075 20093 AGTACAGTTACGGGCATCG 59 NA Drosophila melanogaster 61 tRNA:CR31946 FBgn0051946 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S7:23Ea FBgn0011984 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:L:35C FBgn0028889 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30326 FBgn0050326 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C3227a FBgn0082940 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A2564 FBgn0065066 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR42201 FBgn0085831 FBtr0114289 2 1 1 65 YHet 307220 307238 AACCGTCATCTATGGAAGC 57 307173 307191 ATTCCTGCACCGAATACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr004:X FBgn0047095 FBtr0091949 2 1 1 92 X 19068651 19068669 TCTGAAGAGTCCCACTTCC 58 19065306 19068598 AATTATCGAGGGTATCTTGGTG 57 NA Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073514 2 1 2 143 X 11473146 11473709 TCGAGCGTTTAGGTAGCTC 59 11473814 11473834 ACTATGCGGAAATCGTTACTC 58 NA Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 2 1 1 144 X 21940540 21941578 GGCAAGTTCTTTCGGATCC 58 21940414 21940432 CAGTCCACTAGCTTCTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 waw FBgn0024182 FBtr0100536 1 1 1 88 X 21234551 21234569 ATCTTCCACCGTCACAAGG 59 21234620 21234697 GATCGCGAAACTTCATTGGA 59 NA Nonspecific Drosophila melanogaster 61 CG1494 FBgn0031169 FBtr0077187 3 1 1 81 X 21160757 21160933 CGTTATGCTATACGGTTACATATCG 59 21160972 21160990 GCTCGCCATTAAATACGCA 59 NA Drosophila melanogaster 61 unc FBgn0003950 FBtr0077259 1 1 1 80 X 20984101 20984122 AATGCTTTCACATTCCAAGGAG 59 20983979 20984060 TTGAGTAGCAGGAGCTTGG 59 NA Drosophila melanogaster 61 Ser6 FBgn0011834 FBtr0077272 2 1 1 60 X 20833973 20833993 GCAGTACAACACCCTAAAGTC 59 20833933 20833951 TCCGAAATCGATCAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32506 FBgn0052506 FBtr0300211 1 1 1 80 X 20335196 20335214 TATGGATGCCCTACAGCAG 59 20335257 20335831 AGGAGTTCGCTACTGTAGAC 58 NA Drosophila melanogaster 61 Obp19b FBgn0031110 FBtr0077302 2 1 1 157 X 20287814 20287832 AACCTTCTGCTAGCAGTGG 59 20287953 20288036 ATCTCGACGATGTTCTCCC 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089398,FBtr0089405,FBtr0089406,FBtr0089399,FBtr0089407,FBtr0089403,FBtr0089409,FBtr0089402,FBtr0089408,FBtr0089401,FBtr0089397,FBtr0089404 2 13 13 60 X 20100247 20100265 CCTCTTCCTAACCTCGTCC 58 20100138 20100224 CTTTGTGTCCTTTAGCGACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074807 1 1 2 60 X 19676920 19676938 GAAGCAGAAGTCCAAGTCC 58 19676533 19676899 GTATTTGTATTATCTGCGCCTC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14221 FBgn0031042 FBtr0290086 1 1 1 84 X 19513565 19513583 TTAACGGTGACAATCCGCT 59 19513416 19513518 TTGTCGGTAGGAACATACGG 59 NA Drosophila melanogaster 61 CG14196 FBgn0031002 FBtr0074691 3 1 1 60 X 19131963 19131983 GCCTTCTGTGAAACCTTTCTC 59 19131765 19131941 TGCCAAAGCCAAACAACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7453 FBgn0030991 FBtr0074666 1 1 1 60 X 19075041 19075062 CTTACTGGAAGTAATCTTGCCG 59 19075083 19075101 CGGTAACAATGGGTACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6961 FBgn0030959 FBtr0074660 1 1 1 105 X 18681944 18682025 CGACAGAAAGTTCAATGCGA 59 18681858 18681876 CTTTGCCGGCATATCAGAG 58 NA Drosophila melanogaster 61 CG15042 FBgn0030937 FBtr0074619 1 1 1 60 X 18421126 18421147 TACATAAACATCCTAGAGGGCA 58 18421087 18421107 TGATATCGCTTCGTAGTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 2 2 2 85 X 18374511 18374586 TGAATGTGACCAATCGTGC 58 18374444 18374462 AAAGGATGCATTGCACTCG 59 NA Drosophila melanogaster 61 CG7135 FBgn0030895 FBtr0074515 2 1 1 84 X 17998606 17998788 CAGGTGAAGATTATTGACTTCCAG 59 17998831 17998849 GTTCCAAGCTGGTGTTCAG 59 NA Drosophila melanogaster 61 CG32494 FBgn0052494 FBtr0074506 1 1 1 223 X 17894294 17894476 TGGGTATGGCAACATCAGG 59 17894663 17894681 TTACTGCCTAGTCGTTCGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG6847 FBgn0030884 FBtr0074505 1 1 1 110 X 17816095 17816115 GATCTTCAACTCCTTCAACGA 58 17816185 17816264 TCGTCTTTCTCGGATATTTCG 58 NA Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 3 2 2 143 X 17314084 17314102 ATGGTGAACTTCCATCACG 57 17313899 17313978 GCCATGTAGTTTGAAGAAGC 57 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 2 5 6 117 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 CG16700 FBgn0030816 FBtr0074383 2 1 1 82 X 16989590 16990330 CCTACAAGCTATCTGGAGACC 59 16990374 16990392 TTGAAGGCATCTCCCATGG 59 NA Drosophila melanogaster 61 CG8945 FBgn0030815 FBtr0074411 1 1 1 80 X 16978009 16978128 GGTCCAAGTCTCAGAGGTC 59 16977947 16977966 CTCGTAGTTTAGAGTGCCCT 59 NA Drosophila melanogaster 61 CG13010 FBgn0030770 FBtr0074373 1 1 1 134 X 16572621 16572639 GATAATGCGGAGCAACCTC 58 16572505 16572523 GCTCATGCCAAAGTATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp2B-14D FBgn0011826 FBtr0074294 1 1 1 60 X 16453037 16453055 AAATCATCCAGGACGGAGC 59 16452995 16453015 GCCTCAATATCGATCATCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9903 FBgn0030756 FBtr0074297 2 1 1 96 X 16433850 16433868 CACTGTCCGTCGTACTCAG 59 16433700 16433790 GCAGCTACAAGAATCTGCC 59 NA Drosophila melanogaster 61 CG3560 FBgn0030733 FBtr0074216 3 1 1 93 X 16180634 16180715 TCAACCAATACGGTCTGCA 59 16180772 16180790 TCATCGTACAGCTTCCTGG 59 NA Nonspecific Drosophila melanogaster 61 Pros28.1 FBgn0004066 FBtr0074210 3 1 1 125 X 16170852 16170937 ATAACCAGATTCATTGCCCAG 58 16171024 16171042 CTCAGTCTGGAACAGATGC 58 NA Drosophila melanogaster 61 CG3415 FBgn0030731 FBtr0074209 3 1 1 85 X 16166186 16166204 CTCTTCAACGAGCTGAAGC 59 16166248 16166567 ATATAGCTACCATTATCCTCGCAG 59 NA Drosophila melanogaster 61 CG8565 FBgn0030697 FBtr0074103 2 1 1 81 X 15733461 15733479 TTCGGACCGAGATCAAGAC 59 15733523 15733598 TTGGTCATCTTGGAGCTAGG 59 NA Drosophila melanogaster 61 CG5548 FBgn0030605 FBtr0073960 2 1 1 287 X 14958009 14958092 CAATTTACGATGGGCAACG 57 14958343 14958361 GTAGTCCTCGTACTCGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 na FBgn0002917 FBtr0112815 1 1 1 80 X 14168824 14169177 TTGCTAGTGGCTATTATCATGG 58 14169216 14169236 TATATCCGCATACGAAAGCAG 58 NA Drosophila melanogaster 61 Bap60 FBgn0025463 FBtr0073741 3 1 1 84 X 13052003 13052021 TTCTTCCTAAGCTTCGCCA 59 13051877 13051956 CGGTCATCAGCTTCAAATCC 59 NA Drosophila melanogaster 61 CG4395 FBgn0030437 FBtr0073753 2 1 1 84 X 12846394 12846414 GTGCACTACTTTATGTTGGTC 57 12846087 12846348 TGACAAAGACCACAACGAG 58 NA Drosophila melanogaster 61 ade5 FBgn0020513 FBtr0073705 1 1 1 186 X 12653941 12654392 AACAGCATCCATAGAGGGC 59 12653773 12653791 ACCGTTGGTGGTATTGGAG 59 NA Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073686 2 1 2 97 X 12638895 12638913 TTTCCTCAAGCCGGTACTC 59 12638973 12640911 TGTCAACATCCTGAATGCTG 58 NA Drosophila melanogaster 61 CG1463 FBgn0030406 FBtr0073657 3 1 1 128 X 12505495 12505566 ACTAAGACCAGAACTATGCG 57 12505386 12505406 GAGCTCCTTCTTATGGATCTG 57 NA Drosophila melanogaster 61 Cyp318a1 FBgn0030369 FBtr0073623 3 1 1 87 X 11927455 11927473 ACGAATCTTCATGGACAGG 57 11927521 11927943 TAATGGTCAAACAGGATACCTC 57 NA Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0302182,FBtr0073591 3 2 2 87 X 11816184 11816271 CCATCACAGATCTTAATCTGTCAC 59 11816120 11816139 ATATTCAGCTTGGTTAGCGC 58 NA Drosophila melanogaster 61 CG15739 FBgn0030347 FBtr0073569 1 1 1 187 X 11768211 11768229 CATCAAGTTCGAGGGACTC 57 11768501 11768519 TCAGATTGAAGTCCACGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32663 FBgn0052663 FBtr0073563 3 1 1 98 X 11720413 11720431 GAGATCATTACGCACGCTG 59 11720493 11720585 GTGGTTCAGATTGGAACCG 58 NA Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073503 1 1 2 106 X 11373132 11373150 GAACTCGCGTAATGTGGTG 59 11373217 11375566 TCGCAGTCTCCAATAGAATCTC 59 NA Drosophila melanogaster 61 sev FBgn0003366 FBtr0073393 1 1 1 91 X 10972707 10972728 GTTTAACTTAGCCGATTACGAC 57 10972571 10972657 CAAATCGGAACCTGTATTGTG 57 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073407 2 1 3 80 X 10766063 10771458 GTCCTTTGGAGACAATCTTCG 59 10766003 10766022 GAGAATTTAACCACCGAGGC 59 NA Drosophila melanogaster 61 sbr FBgn0003321 FBtr0073411 1 1 1 80 X 10728726 10728929 CAAACTGGTTAAGTTGGACGG 59 10728666 10728684 GTTTCGAGAAGACGTCCCT 59 NA Drosophila melanogaster 61 CG32676 FBgn0052676 FBtr0071503 3 1 1 82 X 10611422 10620968 TGGAAACTGGTTTATTGGCTC 58 10611360 10611378 ATCATTAACCTGTGCGTCG 58 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089805 3 1 2 124 X 10135761 10136852 CTTGATTTCGGTCGTTCGA 58 10135655 10135673 ACATTCGAGATACGCAACC 58 NA Drosophila melanogaster 61 CG15308 FBgn0040941 FBtr0300073 1 1 1 192 X 10112399 10113113 ACATGAAGTTCTTCATCGCC 58 10112226 10112244 GACTCGACCACATTGACAC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071413 2 1 4 164 X 9893325 9895896 ATCACCAAGCAAATCGACG 58 9896023 9896042 GCTCTTAGAGCTCTCATCGT 59 NA Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071391 2 1 2 86 X 9778821 9778840 AAATTCCAGTGGCCTATGAC 58 9778889 9778976 AAATCCCTCATGGGATCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 85 X 9524046 9524066 GCCGTCGGATTATATTAATGC 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG3004 FBgn0030142 FBtr0071368 2 1 1 80 X 9499847 9499865 ACCACACCATTAAGGTGTG 57 9499729 9499803 CATTCACTTGCGAGGTCTC 58 NA Drosophila melanogaster 61 CG7267 FBgn0030079 FBtr0071354 1 1 1 106 X 8965981 8965999 GCTATACGAGACGGTTGGT 59 8965823 8965911 TGAGCACATGACCGATCAG 59 NA Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300001,FBtr0300000 1 2 2 117 X 8946142 8946160 GGTCAAGACGGATCTGGAG 59 8946241 8946319 GGAACGAATGTGGTACAGC 58 NA Drosophila melanogaster 61 CG11294 FBgn0030058 FBtr0071224 1 1 1 81 X 8587338 8587356 CTATCCCGACGTCTTCCTG 59 8586765 8587293 ATTCTGGAACCACACCTGG 59 NA Drosophila melanogaster 61 CG1387 FBgn0030033 FBtr0071173 2 1 1 93 X 8281594 8281686 GGGTAGATATGAAGAAGACTTAGG 57 8281737 8281756 ATTAACATCCCAATCGCCTG 58 NA Drosophila melanogaster 61 CG15343 FBgn0030029 FBtr0071178 1 1 1 92 X 8166786 8166809 GATTAACTACGATGATCTCAAGGC 59 8166646 8166735 CAAGCGGTATAGCTTGCTG 59 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 2 3 3 94 X 8140691 8140709 GTCGAGTATGGCATCACCA 59 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 sni FBgn0030026 FBtr0071183 2 1 1 60 X 8137003 8137021 ATCTATTTACCACCTGCCG 57 8136267 8136286 TTCTTGGCTAGATCCTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 slpr FBgn0030018 FBtr0071184 3 1 1 86 X 8070106 8070124 AAATCGTTGTGGTCCTGTC 58 8069978 8070056 AGACACCGACCTTATCTCC 58 NA Drosophila melanogaster 61 CG2260 FBgn0030000 FBtr0071194 2 1 1 128 X 8013314 8013395 AGCGAAAGGAGTTTATTGCC 59 8013205 8013223 TGAAACGATCCAGAACGGA 59 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 1 3 3 80 X 7852240 7852318 GTACGCCAACTAGAGGAGG 59 7852178 7852200 GGCTAGAGTCTTGTACTTATCGA 59 NA Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140,FBtr0300899,FBtr0071141,FBtr0300900 1 4 4 99 X 7787304 7787322 ACTGGATAAGCGAGCACTG 59 7787223 7787241 CCGGAACATGGTCATACGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42340 FBgn0259242 FBtr0299863 3 1 1 93 X 6378100 6378118 TTTGTGGTCGATAACGGAG 57 6377948 6378045 CAAAGTGTCCTGAAATAGCTG 57 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 3 4 4 95 X 5215913 5215931 CTAGAGCGCTCGTATCAGG 59 5215755 5215857 CAGATCATTCAGTTTGAATGCG 58 NA Drosophila melanogaster 61 CG4041 FBgn0029736 FBtr0300998 3 1 1 87 X 4810513 4810585 CAATGAAGAGTTGGCCTTCC 59 4810445 4810463 GATCACCGCCGAATTATCC 58 NA Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0302037 1 1 2 98 X 4698793 4698815 CGAGTGCTGAATAATAGTAGTGC 59 4697638 4698735 TTGGAAATTGGATCCTGCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 HLH4C FBgn0011277 FBtr0070691 3 1 1 151 X 4540465 4541347 TAACTGCTCATTCAGCAGC 58 4540332 4540351 CAGATAGTAGCGACTAAGCG 57 NA InUTR Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 3 2 2 85 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515242 4515260 AGTAGCGGCAGTTAAAGGG 59 NA Drosophila melanogaster 61 CG11444 FBgn0029715 FBtr0070698 2 1 1 61 X 4447982 4448000 TTCGTCAACCACAAAGGTC 58 4447939 4447957 GATTCCTGTTGCAGTTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 2 1 1 61 X 4275989 4277077 AAGAAGATCCAAGCATCCC 57 4277102 4277120 GTGTCCTCTAAGTCCTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 GlcAT-I FBgn0066114 FBtr0070644 2 1 1 80 X 4025459 4025478 CACGTTACCCACGATTTACG 59 4025519 4025602 AGGTGAGATAGTCTGGTTAGC 58 NA Drosophila melanogaster 61 CG6414 FBgn0029690 FBtr0070624 3 1 1 121 X 3863849 3863867 CATCATGACGATTCCGTGC 59 3863660 3863765 CATCCATCCGAGATCAGGTC 59 NA Drosophila melanogaster 61 CG32779 FBgn0052779 FBtr0070601 3 1 1 156 X 3697168 3697186 GAATGTCAGTCCTGGTCAG 57 3697305 3697324 CCACGAGAGGTTCTTATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ilp7 FBgn0044046 FBtr0070577 1 1 1 81 X 3562416 3562434 AGGCTTGGATCAAGAAGAC 57 3562601 3562619 CTTCGCAGAAACATGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 N FBgn0004647 FBtr0070507 2 1 1 82 X 3063650 3063762 ATTGCATCAAGAATGCGCA 59 3063805 3063826 CGAGTAGGCATAATTATCCAGC 58 NA Drosophila melanogaster 61 CG3598 FBgn0025645 FBtr0070552 3 1 1 65 X 2831550 2831570 GAAGCAGATGATGGTTAACCG 59 2831596 2831615 ATCTCGATAATGCCATCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gt FBgn0001150 FBtr0070460 2 1 1 145 X 2322754 2322848 TCGATCTCAAGACTGATCGC 59 2322628 2322646 GTAGGCCGTGTACAGATCC 59 NA Drosophila melanogaster 61 CG3071 FBgn0023527 FBtr0070398 1 1 1 96 X 2156938 2156957 TCCTTTCTTCCACTGAACAC 57 2157016 2157102 GTAGTTCTGGTTTCGCCAG 58 NA Nonspecific Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 3 1 2 97 X 2101644 2101662 TACACCAAGATCCTCTGGG 58 2100495 2101584 TCAGTATTGTCGTGACACCT 58 NA DesignNoJunction Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0301515 1 1 2 80 X 2025749 2030506 GAGTGACTAGCGGACACAG 59 2025687 2025706 AATCGCTGATGCTGAAATCC 59 NA InUTR Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454,FBtr0070308 1 2 2 110 X 1760521 1760607 AGCAAAGGGCTATATGTTCC 57 1760680 1760698 CTTTGTGAGATTGGCTCGT 58 NA Drosophila melanogaster 61 CG3795 FBgn0025378 FBtr0070278 2 1 1 109 X 1603620 1603638 ATCTCAGTCTGGGTGATGC 59 1603464 1603547 TGGTCCGAACTGAATGACC 59 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815,FBtr0089814 3 2 2 80 X 1578775 1579694 ACAAGGTGTCGATGGATGG 59 1578713 1578731 ACTGGCTGTAGTATGGCTC 58 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 2 1 1 190 X 1562775 1562856 TACAAGATGACAAGCGGCA 59 1562603 1562621 ACAGTGTTAAGCACAGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 ns3 FBgn0028274 FBtr0070297 3 1 1 91 X 1356602 1356688 GCTTATGGATACAATCGCGG 59 1356530 1356551 CCATTGACGTAGTCTTTAAGCA 58 NA Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070168,FBtr0070167 1 2 3 141 X 829695 829713 AAATCACGCTGCAAGTCAC 59 830438 830456 GATCACAAACTCGTGGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 3 3 3 269 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654936 654954 TGTTGGAAGAGGGAACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070129 3 1 8 175 X 550760 551139 CGTTTGTTATCTTTGAAAGCCC 58 551275 551293 AATTCACATTGGGCAACGG 59 NA InUTR Drosophila melanogaster 61 CG13369 FBgn0025640 FBtr0070115 3 1 1 80 X 518362 518443 ACATTGGCAACATAGAGCAC 59 518485 518504 CCAGAGTTATGATCACCGTG 58 NA Drosophila melanogaster 61 ase FBgn0000137 FBtr0070075 3 1 1 60 X 355598 355618 AGCAAGAAGCTATCCAAAGTG 58 355635 355658 CCAAACTTCTTATGTACTCTACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pcl FBgn0011822 FBtr0070100 1 1 1 60 X 330949 330970 CGATACAAAGTCAGACATTCGG 59 330910 330930 GCATCTACGAAATTTGTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 y FBgn0004034 FBtr0070071 2 1 1 90 X 250885 250903 CTCTACCTGTTGGAGTCGA 58 253656 253674 ATATAGGTCAGAGTGGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CR40596 FBgn0085753 FBtr0114203 3 1 1 60 U 10047486 10047506 ACTGAAGTAGAGAAGGGTGTC 58 10047527 10047546 GCCTTGAACTGACTAACTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40572 FBgn0085747 FBtr0114197 1 1 1 175 U 8735313 8735332 GTGGTCATATGATTCTGGCA 57 8735470 8735488 TGTCGTAGAACAGCTAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40947 FBgn0085540 FBtr0302352 3 1 1 60 U 8131589 8131607 TCCTGAATCTGGTGTTCGA 58 8131547 8131565 ATGCCGTACTCCTCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42411 FBgn0259842 FBtr0300141 1 1 1 125 U 6390254 6390273 AATGTTCTAGGGATGACGTG 57 6390361 6390379 TAGTAGGTGATAGCTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp1-Y1 FBgn0261399 FBtr0302342 1 1 1 60 U 8549877 8549898 GACGAGCATACACTTACTACGA 59 8549916 8549937 TCCATAATAGCGATTGATAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32010 FBgn0052010 FBtr0089181 1 1 1 82 4 34123 41608 GCTGTTTGCTAAGGATATTCCA 58 34062 34080 CGCTTATTTGTGGAAGCCT 58 NA Nonspecific Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 2 4 4 83 4 596940 597611 TTAACGGAAACGATGACCA 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 3 7 7 86 4 470935 471007 ATGGAGTTGGTTACTGGTG 57 471054 471075 TCTTATAAGATGAGAAGCGTCC 57 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 1 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 1 2 2 94 4 330250 330328 ATTGCAGCAGATTGGTCAG 58 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 1 3 3 107 4 231104 231195 TAGGAACAGCTGGTACTTTGG 59 231261 231282 GCTATCGAGTTACTATCACGGA 59 NA Drosophila melanogaster 61 plexB FBgn0025740 FBtr0089179 1 1 1 238 4 61908 63554 GAAGCATTCGACAAGGAGC 59 61688 61706 TAAATCATCAAGTCGGCGG 58 NA DesignRelaxed Drosophila melanogaster 61 alpha-Est4aPsi FBgn0027934 FBtr0090038 3 1 1 116 3R 3353503 3353606 TCGATCATTTCGATGCTAACTG 59 3353683 3353701 ACTCTGGTCGGGATTTGTC 59 NA Drosophila melanogaster 61 snRNA:U6:96Aa FBgn0004188 FBtr0084650 1 1 1 61 3R 20381853 20381871 GAGAAGATTAGCATGGCCC 58 20381896 20381914 AAATGTGGAACGCTTCACG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U1:95Cc FBgn0004187 FBtr0084487 1 1 1 75 3R 19652076 19652094 TTAACCGTGATCACGAAGG 57 19652133 19652151 ATCGCAGAGGTCAACTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31044 FBgn0051044 FBtr0085391 2 1 1 60 3R 25041039 25041057 TGGGAAAGATTCATTGCGT 57 25041079 25041099 TTCTCTGCTTCTTATCAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 3 5 5 85 3R 27426319 27426409 AGCAGTACATGAGGATTCCTG 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 CG12063 FBgn0039851 FBtr0085790 3 1 1 105 3R 27328401 27328693 ATAACAGGGTACGTGCTATCG 59 27328760 27328778 TGCAAGATTCATTGGCCTG 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 3 4 4 108 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230067 27230141 TCATGTTACGTCCATTGCT 57 NA Drosophila melanogaster 61 CG18673 FBgn0040629 FBtr0113330 2 1 1 80 3R 27089285 27089359 TACGTACAATGGATCTCTGACC 59 27089400 27089418 GGATAGTCCAGAACGTCGG 59 NA Drosophila melanogaster 61 Gycbeta100B FBgn0013973 FBtr0085753 2 1 1 80 3R 26980441 26980462 AATGCTGAATGAACTCTACACG 59 26980501 26980662 ACTGTTTCAACCTTGTACACG 59 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 3 4 4 117 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650761 26650779 CCTGAAAGCATCTTGCTGG 59 NA Drosophila melanogaster 61 CG11313 FBgn0039798 FBtr0300700 1 1 1 80 3R 26556221 26556303 GCAAAGGAGATGTAGTCTCTG 58 26556161 26556179 GTAGGCACCTTCCATTGAG 57 NA Drosophila melanogaster 61 CG2267 FBgn0039792 FBtr0085672 1 1 1 80 3R 26454492 26454510 ACAATATTGGAGGTGGCGA 59 26454376 26454448 TCCAGTCAGTCATCACTGG 58 NA Drosophila melanogaster 61 CG31019 FBgn0051019 FBtr0085665 2 1 1 80 3R 26424351 26424432 CAACGAAGATGGCTATTACCG 59 26424473 26424492 GGCAGGATGTTAATGAAGCG 59 NA Drosophila melanogaster 61 CG9717 FBgn0039789 FBtr0085679 1 1 1 80 3R 26410841 26410861 GCATCAATGTGGTCTTCATCC 59 26410590 26410799 TCAGACCAGTAGTTGTCGC 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 3 3 4 88 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032364 26032382 ACATTCAGGTAGTTGTCGG 57 NA Drosophila melanogaster 61 CG1983 FBgn0039751 FBtr0085574 3 1 1 84 3R 26003230 26003248 GGAATTCGACGTCAAAGCC 59 26003100 26003182 AGCTTGAACTTCTTTGGGC 58 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 3 3 3 81 3R 25864677 25864801 GTCTACGGATACTCGCAGG 59 25864614 25864632 TGTAGTCCGGGTATTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Nlp FBgn0016685 FBtr0085552 1 1 1 90 3R 25830770 25831022 ATTCTACGGAGTCACTTTGAC 57 25831074 25831092 TTTGATGACCAGCTTCTGG 57 NA Drosophila melanogaster 61 CG14529 FBgn0039609 FBtr0085328 2 1 1 60 3R 24699159 24699179 ACTCTACTGGGTGTCTATGTG 58 24699200 24699219 ACTGTAGGCGTTTAATCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564,FBtr0300606,FBtr0300607 1 3 3 83 3R 23973960 24027894 CAACTCCAAGCCAGAACAG 58 24027940 24027959 GTGAATGCATCTTTCAGCTG 57 NA Drosophila melanogaster 61 CG5527 FBgn0039564 FBtr0085255 3 1 1 60 3R 23781869 23781887 TCAACAGGCTCTACATGGC 59 23781974 23781993 ATGTCAGAGATCTCCGAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 1 2 2 121 3R 22702878 22703271 CACTACAGAAACTTTGTCGTGG 59 22702778 22702796 TAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 2 3 3 81 3R 22544516 22544534 GTACTACTTCGCAGTGGAC 57 22544575 22544652 GGACCAATCCTTATGCATATAGG 58 NA Drosophila melanogaster 61 amon FBgn0023179 FBtr0085048 3 1 1 111 3R 22526452 22526541 TCAATGAGGGTCGAAATGG 57 22526359 22526377 GAAATGGTCCACATGGAGG 58 NA Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 3 2 2 82 3R 21882158 21882176 AAATCGATGTCAGCGATGG 58 21882034 21882112 TTCCAGAACCTTCTGAGCT 58 NA Nonspecific Drosophila melanogaster 61 CG14546 FBgn0039395 FBtr0084984 3 1 1 93 3R 21747767 21747786 GACTGTCGAAGGACCTACAG 59 21747595 21747613 AAGCTCGCTTCACTCTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31091 FBgn0051091 FBtr0084941 2 1 1 90 3R 21727250 21727334 AGAACTAATTCGACCGCCT 58 21727388 21727406 GATGCTCCTGCATGTAGTG 58 NA Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 1 3 3 84 3R 21511212 21511297 ACTATTTGGATCACCCAGCT 58 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 CG31437 FBgn0051437 FBtr0084834 2 1 1 103 3R 21209455 21209546 AATATTGGTGATCTTGGGCC 58 21209610 21209630 CCTCGACATCTATATCCAAGC 57 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986,FBtr0089983 3 6 6 80 3R 21182169 21182188 AGAGACGAGGAGACATTCAG 58 21182054 21182126 TGTCATGTATCCTAGGCGT 57 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113350 3 1 5 60 3R 21149599 21151174 TTGTTTAAGATGTGCGTAGTCG 59 21149560 21149579 AAGAATCACCGTGATTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 1 3 3 91 3R 21133344 21133422 TACTGCTGAAGGATGGCAG 59 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG31098 FBgn0051098 FBtr0084863 3 1 1 80 3R 21117675 21117758 GTGGTCACATTGGACTTTCAG 59 21117615 21117634 GTTCAAGGATCCGTAGAGGA 58 NA Drosophila melanogaster 61 CG13653 FBgn0039288 FBtr0084804 2 1 1 161 3R 21021344 21021362 TCTCTACATCAAGAGCGCG 59 21021553 21021573 AGAATGAATCGATTGAGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 beta4GalT7 FBgn0039258 FBtr0084755 2 1 1 145 3R 20849864 20849952 ACATTCAGCCATATTCACAACC 59 20850058 20850076 ATGAGCATCTCATGCACCT 59 NA Drosophila melanogaster 61 CG11069 FBgn0039244 FBtr0084712 3 1 1 80 3R 20721266 20721285 CAATCCTGCACCTTTGTTCC 59 20721322 20721425 CTTCAGATAGCCACTCAATATAGTG 59 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 1 1 1 128 3R 20630045 20630065 CTCAGATCTATAAGGACGCCA 58 20629879 20629955 TTAGTGCAGCAATTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ppox FBgn0020018 FBtr0084664 3 1 1 60 3R 20486865 20486883 GAACAGAAGTACGGAGGAG 57 20486823 20486842 TCTTGTTCTTCTCAAAGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17784 FBgn0039192 FBtr0084626 2 1 1 80 3R 20190111 20190186 GCATGGAGCAACTAGATGG 58 20190049 20190067 TCTGAAAGGGTTTCTGCGA 59 NA Drosophila melanogaster 61 CG31133 FBgn0051133 FBtr0084583 3 1 1 60 3R 19973427 19973446 GAGACTTTGTCTCTAAGCGA 57 19973386 19973407 AAGAAATCATAGTGCTTCTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kal-1 FBgn0039155 FBtr0084549 2 1 1 85 3R 19972007 19972091 AGCTCCTACGTTAAGGATACAC 59 19972137 19972155 GATATGGCCTGCACTTGGA 59 NA Drosophila melanogaster 61 Rab7 FBgn0015795 FBtr0084503 3 1 1 99 3R 19819896 19819978 CAATGCAGATCTGGGACAC 58 19820040 19820059 GTCACATCGTAGACAAGCAC 59 NA Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0084521 1 1 2 180 3R 19754127 19754261 ACAGGTTGAATAGGGAAACCT 59 19753967 19753985 TTGCTAATCCGTTTCACGC 59 NA InUTR Drosophila melanogaster 61 CG10221 FBgn0028475 FBtr0084467 3 1 1 80 3R 19582858 19582932 AGACCAAATAGAAGCTCAAACC 58 19582799 19582817 ATGGCTACTCGCTTATCCG 59 NA Drosophila melanogaster 61 Ir94f FBgn0051225 FBtr0290293 3 1 1 60 3R 19307742 19307760 CTCTGATAACTCAACGGCT 57 19307783 19307802 GCGTCTTAGATAGTGAGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 3 1 1 60 3R 19228918 19228937 ATCAGCTACTTAAGGTCGTG 57 19228957 19229528 CTGTAGACAATCAAAGACTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 wda FBgn0039067 FBtr0084387 1 1 1 80 3R 19082260 19082278 GTCAAGTGCTCTGAGGAGG 59 19082121 19082221 GTATTCGTTGTAGGAGTTATCAGC 59 NA Drosophila melanogaster 61 CG17111 FBgn0039048 FBtr0084355 1 1 1 80 3R 18889528 18889546 CAGTGTGGATAGCTCAGAG 57 18889404 18889484 TGTGGGAACATGTGTTCTG 58 NA Drosophila melanogaster 61 CG7023 FBgn0039025 FBtr0084311 1 1 1 295 3R 18592407 18592425 AATCATCACCAGACAACGG 57 18600706 18600724 ACAGATCGGAGCCAATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4771 FBgn0039018 FBtr0084323 1 1 1 80 3R 18569509 18569591 TACAAAGAGGACTGTCTTCCA 58 18569449 18569470 GATGAATGTGTTGTCCATTACC 57 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 1 3 3 92 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380607 18380627 CAGAACAAACGCCAGATAGAC 59 NA Drosophila melanogaster 61 CG33093 FBgn0053093 FBtr0084287 1 1 1 80 3R 18356839 18356860 CAGGAGCACTCTTCATAAACTG 59 18356723 18356800 CTACTCTATGTTGCAAAGCGT 58 NA Drosophila melanogaster 61 CG17843 FBgn0038919 FBtr0084150 2 1 1 60 3R 17740249 17740270 CAGTATCTTACACCATCTTCGG 58 17740290 17740309 GGAAGTCTCCAATAGTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7009 FBgn0038861 FBtr0084029 2 1 1 127 3R 16959363 16959436 TTGCTAGAAGGTCTCACCC 58 16959254 16959272 ACGGCGATGATCTTTACCT 58 NA Drosophila melanogaster 61 CG31207 FBgn0051207 FBtr0084044 1 1 1 80 3R 16872102 16872122 GAGTATCGCAATAATAAGCGC 57 16871978 16872060 TAGCCAGAATACCCATCGG 58 NA Drosophila melanogaster 61 RpS20 FBgn0019936 FBtr0083964 1 1 1 81 3R 16648604 16648863 TCGCTTCCAGATGAGAATCC 59 16648902 16648925 GTTGATGGAGGTAATCTTCTTGAC 59 NA Drosophila melanogaster 61 GluRIIE FBgn0051201 FBtr0110837 2 1 1 80 3R 16471506 16471580 TGGTCCCAAAGCTTTATCCA 59 16471445 16471463 GCGGTGTAGGAAGATACCA 58 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 3 3 3 86 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045630 16045648 GATGAAGCTCCGGTATCAG 57 NA Drosophila melanogaster 61 CG6300 FBgn0038730 FBtr0083798 1 1 1 136 3R 15598688 15598764 TTACTGCCCAGATCTCTGC 59 15598570 15598588 ATTCCTGCCTATGATGCCC 59 NA Drosophila melanogaster 61 CG34286 FBgn0085315 FBtr0112482 2 1 1 82 3R 15541509 15541529 GATCCTGCTTGTTGTAATCGT 58 15541391 15541468 TTTCCAGATGAATCTGTTTCGG 59 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 1 2 2 85 3R 15477480 15477504 GCTATTCAGTAGCATTAGCAATAGG 59 15477547 15477677 TTCCTGTCCTATAGCGCAC 59 NA Drosophila melanogaster 61 CG6195 FBgn0038723 FBtr0083803 3 1 1 82 3R 15472848 15472947 GATTCTGAGAAAGGGCGTC 58 15472784 15472802 CCAGGGCATACTTGAACTG 58 NA Drosophila melanogaster 61 CG31404 FBgn0051404 FBtr0083774 2 1 1 60 3R 15201057 15201075 TTCGCAAAGATAACGCTCC 58 15201015 15201035 GAGTAGGTGAATATACCCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5250 FBgn0038691 FBtr0083743 2 1 1 60 3R 15054298 15054317 GGACATTCAGTTCGACTACC 58 15054257 15054275 GGAGGTGAAGAGCTCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6005 FBgn0038672 FBtr0083719 1 1 1 83 3R 14849156 14849237 AGGATTGGTTCTACTTTCCGT 59 14849093 14849111 TATCCTGCCATTGCTTGGT 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0290210 1 1 5 89 3R 14411780 14412009 CTTTAATCCGAGGTGGCAC 58 14412061 14412080 TCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 3 1 1 200 3R 14209940 14210046 CATTTGGATGGACGCAACC 59 14209758 14209776 CATCTCCCATAGTTTGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 3 1 1 85 3R 14046384 14046402 AATCGACTGTCCGGATGTG 59 14046513 14046532 GAAAGTAGTCGCTTTGGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14317 FBgn0038566 FBtr0083541 3 1 1 60 3R 13907316 13907334 CTTGACGGTAATGTTGCCC 59 13907355 13907376 TAAGCCAGATAGATTCATGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17806 FBgn0038548 FBtr0083527 2 1 1 70 3R 13627736 13627754 CTCTCAAGGACCACATCGT 59 13627628 13627646 GAAGAACGTTTGGCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31249 FBgn0051249 FBtr0083483 1 1 1 89 3R 13512651 13512669 AAACTCGAGGTACTGGGTC 58 13512522 13512540 CTCCAACCAGAGGACTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7523 FBgn0038533 FBtr0083490 1 1 1 80 3R 13496058 13496140 GGGTCATCACATATCTCTTCG 58 13495998 13496016 GGTGAAAGTCGTGATAGCC 58 NA Drosophila melanogaster 61 CG14325 FBgn0038531 FBtr0289974 2 1 1 80 3R 13453577 13453595 TGCGGCGTACATAAATCAG 58 13453639 13453815 AGCGGAATGTGATCATTCG 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083347 3 2 6 83 3R 12550978 12550997 CGGCATATCAACAGACATGG 59 12484783 12536290 AGACCATTTGTACCTAGCCA 58 NA Drosophila melanogaster 61 bor FBgn0040237 FBtr0083276 2 1 1 94 3R 12087641 12087724 CATAAGCAGAAGATGGCCTG 58 12087566 12087584 TTTGCAGTTAGGGTGAGGG 59 NA Drosophila melanogaster 61 Bin1 FBgn0024491 FBtr0083279 2 1 1 66 3R 12012469 12012489 TGGAATCTATGATTGTGGAGG 57 12012350 12012441 ATAGGACAGGTCTTCTCGC 58 NA DesignRelaxed Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 1 2 2 80 3R 11798315 11798425 GCAAGAAGTATTTGGCCCAC 59 11798254 11798275 CATACTGCAGGAAGTGAATGAG 59 NA Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0083240 2 1 2 94 3R 11789257 11789329 TATCAATCGCTAGCCATGGA 58 11789182 11789200 TTGGTTAGTGCTTGCATGG 58 NA InUTR Drosophila melanogaster 61 rec FBgn0003227 FBtr0083193 1 1 1 122 3R 11656164 11656182 AATCCGGTCCTAAACGAGG 59 11650577 11656078 TATCGCAAGAAGTTGCCCT 59 NA Drosophila melanogaster 61 CG31296 FBgn0051296 FBtr0083155 3 1 1 100 3R 11357137 11357158 ATTTCATTCCCTTTGGATGCAG 59 11357003 11357076 GACGCTGAATTTCGATGGG 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083079 3 1 3 118 3R 11137899 11138125 GAATATCTTAGGACCAACTGCT 57 11138203 11138222 ATCCTTCTCAAGCTTCATCG 57 NA InUTR Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 2 2 2 80 3R 11040077 11040155 AACGATACTGATCAGGCGA 58 11040199 11040217 CTCGACGAAGAAGTACCGT 59 NA Drosophila melanogaster 61 CG4203 FBgn0038300 FBtr0083048 1 1 1 74 3R 11036386 11036404 CTACTACGTCCAGGGACTG 58 11036500 11036518 AGAGTTTCACGCAGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 3 3 3 80 3R 11013460 11013551 TTGATACCTGTGAGATGTTCGA 59 11013592 11013610 TAATGCGGCTGCAAATCTC 59 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 2 3 3 83 3R 10970037 10970055 GAGTTCCAGAACTTGCACG 59 10969533 10969990 ATCAAAGTCAATGTGGCCG 58 NA Drosophila melanogaster 61 CG3987 FBgn0038292 FBtr0083026 3 1 1 108 3R 10965775 10966069 CATTCAATGCTGAAACTGGG 57 10966136 10966158 GAGGAGTATGTACCACTATTGTG 58 NA Drosophila melanogaster 61 CG14852 FBgn0038242 FBtr0082957 3 1 1 122 3R 10392055 10392073 AACAACAAGCGGAACAACC 59 10392157 10392177 TCTGCTTAGCCTGTTATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31533 FBgn0051533 FBtr0082905 1 1 1 60 3R 9982798 9982816 ATTGCGTCAAAGTCTGGAG 58 9982756 9982775 AGTTGATCCCTGGTAAACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Orc2 FBgn0015270 FBtr0082866 3 1 1 183 3R 9791129 9791148 TTCAATACGCCCAAGAAACG 59 9791294 9791380 TGGCAATCTGCTTCTTGAC 58 NA Drosophila melanogaster 61 Ipp FBgn0016672 FBtr0082865 3 1 1 111 3R 9785126 9785428 CGATCCAATTGACGCTACC 58 9785503 9785521 GTAGACGCCAATTAGCACG 59 NA Drosophila melanogaster 61 Nsf2 FBgn0013998 FBtr0082883 3 1 1 94 3R 9663592 9663610 ATGAGAGCGATCAAATGCC 58 9663416 9663536 TCCACATATTTGACCTCCTCC 59 NA Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 3 2 2 80 3R 9600884 9600961 AAATCACGAGGATGAAGACC 57 9601002 9601022 TTTACTTTGCCATCTCCATCC 58 NA Drosophila melanogaster 61 CG9602 FBgn0038175 FBtr0082838 2 1 1 129 3R 9543757 9543841 AAATTCCATCCAGTGACATGTC 59 9543649 9543669 CATTTGAAGATGTCGGAGTCG 59 NA InUTR Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0082846,FBtr0112939,FBtr0082847,FBtr0112938 2 5 5 83 3R 9523866 9523884 GACCTGAGCTCAAACACCT 59 9523749 9523819 ATTATCGTGCAGCGTAAGC 58 NA Drosophila melanogaster 61 CG14367 FBgn0038170 FBtr0082819 3 1 1 82 3R 9519870 9519943 GTCCTTAGTCTTCGATCCCA 58 9519985 9520006 CCAGATTCTTGTATTCCTCGTG 59 NA Drosophila melanogaster 61 CG9759 FBgn0038160 FBtr0082861 3 1 1 71 3R 9434792 9434811 CTCTGGCGGATGTAAATCAG 58 9434740 9434758 ATCCAAATTGTCTGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8449 FBgn0038129 FBtr0082778 2 1 1 81 3R 9095548 9095819 TGGATGGATACTTGGAGAATAGTC 59 9095490 9095511 CTTCGCGCTATCTTGATTACAG 59 NA Drosophila melanogaster 61 yellow-f2 FBgn0038105 FBtr0082722 2 1 1 81 3R 8820201 8820219 GTCTACAGAACCTCCGTGG 59 8820030 8820159 GTTGGCGGTTATTTGGATACTC 59 NA Drosophila melanogaster 61 Cyp304a1 FBgn0038095 FBtr0082691 2 1 1 215 3R 8790892 8790910 CTATATCCGGCAGTTCTGC 57 8791088 8791173 AATGGTGTCCTTGGGTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 Spc25 FBgn0087021 FBtr0082690 3 1 1 132 3R 8787671 8787755 CAACAGCAATTTGTTGGATGTC 59 8787844 8787866 TCGATCAAGTTCCTCTATGAAGG 59 NA Drosophila melanogaster 61 CG17404 FBgn0038001 FBtr0302311 2 1 1 130 3R 8050583 8050665 ACTGAATTCTCGTCAACCCA 59 8050472 8050490 AGAAGTGCATCTGACCACC 59 NA Drosophila melanogaster 61 CG14721 FBgn0037942 FBtr0082430 2 1 1 177 3R 7562000 7562018 AATGTCTTCCTGTTGAGCG 58 7562157 7562236 GCTGTGCATGATATAGGTTCC 59 NA Drosophila melanogaster 61 Ugt86Dc FBgn0040257 FBtr0082337 1 1 1 82 3R 6980612 6980923 TGATGGGCGTTTACAAAGC 59 6980966 6980987 GCCCATTAAACTGATTCTTGGA 59 NA Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201 3 1 2 265 3R 6675694 6675712 AAACGGGAACAACATGTGC 59 6677204 6677284 CGCTGTGTACTAATCATGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31272 FBgn0051272 FBtr0082312 1 1 1 80 3R 6582678 6582760 AAACGCATGATGACTTACGG 59 6582617 6582636 TGTCATTAGACTGCTCACGG 59 NA Drosophila melanogaster 61 Rrp46 FBgn0037815 FBtr0082248 2 1 1 130 3R 6239491 6239567 ATCGTGGCAGTATTGATGC 58 6239661 6239679 ATCTAGCACATACTCGCCC 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 1 4 4 80 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592836 5592909 ATCATGTTGTGCAGATGCTC 59 NA Drosophila melanogaster 61 CG16908 FBgn0037741 FBtr0082166 1 1 1 83 3R 5577331 5577349 TAAACCGATGCTTCACCCT 59 5577209 5577286 GTATCACATCACTAAGGCTGC 58 NA Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082075 3 1 2 198 3R 5417892 5433638 CAACAATTAACACCAGGCCC 59 5447343 5447361 ATCACAACCCTCGGAATCG 59 NA InUTR Drosophila melanogaster 61 CG9773 FBgn0037609 FBtr0081953 3 1 1 81 3R 4501232 4501307 CTGGGATACAATTGCATTCCC 59 4501171 4501194 CCAGAAACAGTAGAAAGATGATGG 59 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 1 3 3 138 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499227 TGCCGAACATATCGATGAG 57 NA Drosophila melanogaster 61 CG11737 FBgn0037592 FBtr0081869 3 1 1 80 3R 4346624 4346644 GAATATTGGAACCCAAGAGCC 59 4346685 4346764 TAAACTTGCTCAGTCGATCG 58 NA Drosophila melanogaster 61 Atg13 FBgn0261108 FBtr0081843 1 1 1 60 3R 4176956 4176974 ATCGCCAATAAAGAGCCTG 58 4176997 4177016 TGAATGGTGACGATATGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18749 FBgn0042182 FBtr0100545 2 1 1 60 3R 4072107 4072181 GAGAATAATGCTTTAGGGCAC 57 4072202 4072221 AGGTTGGTAGCATCTTTCTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 nxf4 FBgn0051501 FBtr0081583 3 1 1 60 3R 3172667 3172689 GGAGTATCTATGGATGGTATCGG 59 3172706 3172727 TTGAATGTTAACCGACGATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dpck FBgn0037469 FBtr0081638 3 1 1 81 3R 2908044 2908062 ACCATCAGCAAAGTGTTCG 58 2908107 2908210 GACCTGGTTCCACAATCTC 57 NA Drosophila melanogaster 61 Osi7 FBgn0037414 FBtr0078597 2 1 1 65 3R 2075264 2075282 CAGCTTCCTGAACTCACAC 58 2075310 2075329 CTAACAGCCTGCACAATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1076 FBgn0037402 FBtr0078585 3 1 1 81 3R 1948564 1948662 GTCGTGGAAAGAGTTATCGC 59 1948704 1948724 ACACTCTTCGATCTGCTTAGG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300909,FBtr0300911,FBtr0300908,FBtr0078674,FBtr0300906,FBtr0300913,FBtr0078675,FBtr0300910,FBtr0078676,FBtr0300907,FBtr0078672 1 12 12 62 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587387 1587405 ATCAGAAAGCTCTCAGCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0078837 1 1 2 206 3R 733644 733667 GGATAAGCTTAATGATGTACCAGC 59 733832 733978 TTCATCAGCTTGGTCACGT 59 NA DesignRelaxed Drosophila melanogaster 61 pncr008:3L FBgn0047000 FBtr0091957 1 1 1 105 3L 6213767 6213847 GTATCTAGTTGGCTGCGTG 58 6213916 6213934 GGACCTCTAGCTAACCTCC 58 NA Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 1 2 2 89 3L 23332716 23332734 ATGTCACTTGGAATCGCAC 58 23334563 23334581 AATAATCCCTCACAGGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 alpha-Cat FBgn0010215 FBtr0070038 2 1 1 80 3L 23323184 23323813 ATTAGACGACTTTGACGAAGGA 59 23323125 23323143 CGCTCTTCGAGCAATTGAC 59 NA Drosophila melanogaster 61 CG14454 FBgn0037177 FBtr0078542 3 1 1 295 3L 22685522 22685540 ACATCTACATCCTCGACGG 58 22685245 22685263 CCCACTTATCCCTGAAGCT 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33772 FBgn0053772 FBtr0300027 3 1 1 118 3L 22645110 22645170 ACTGTATCTCATCGTTGGCA 59 22645011 22645035 AGTCCCTAACATAAACACTAGAGTC 59 NA Drosophila melanogaster 61 RpLP0 FBgn0000100 FBtr0078481 3 1 1 127 3L 22069433 22069526 AAGGTTGTGGAACTGTTCGA 59 22069616 22069634 TTCTTGCCCATAAGCACGA 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0111017,FBtr0078468,FBtr0301364,FBtr0078470 2 5 5 103 3L 21900931 21900949 AATAACACGAGCAGCAGTG 58 21901014 21907889 ATACTACCAACCTCCTTTCCT 58 NA Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 1 2 2 80 3L 21819505 21819584 TTAGCAATGGGTTCAAGGTG 58 21819627 21819645 CCAACAATTCCTGACCCTG 58 NA Drosophila melanogaster 61 CG32444 FBgn0043783 FBtr0078424 2 1 1 105 3L 21630404 21631259 AATATCCAGGACAAATTCCAGC 58 21631323 21631343 ATACGTGCCGAAATATCACTC 58 NA Drosophila melanogaster 61 VhaM9.7-2 FBgn0028663 FBtr0078369 3 1 1 157 3L 21533135 21533153 CTTCATTGGCATCATCTGC 57 21533412 21533430 CGTTCATGCTTAGTTTGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7529 FBgn0037090 FBtr0078354 2 1 1 80 3L 21496398 21496416 TTGCTCTTTAAGCCTCAGG 57 21496459 21496536 GATGTTCGTAGTGAGATCGA 57 NA Drosophila melanogaster 61 croc FBgn0014143 FBtr0078395 3 1 1 60 3L 21468444 21468464 CTATCCCTACCACTTGAACGA 59 21468404 21468422 ATGATGCATCTGACTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33287 FBgn0053287 FBtr0290073 2 1 1 80 3L 20962322 20962345 GGATCAATACAAGAAGTTCCTGAG 59 20962200 20962285 TCCCTAAGATTAACCTCCTCG 58 NA Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 3 2 2 100 3L 20783889 20783908 TCATATCCAATCTCACAGCC 57 20783742 20783826 CATGCACTGGATCTGATCC 58 NA Drosophila melanogaster 61 CG4825 FBgn0037010 FBtr0078214 3 1 1 90 3L 20516792 20516810 CATCTTTGAGATGCCACCG 59 20516653 20516741 GTAATATTGCCTAACCGAAGGC 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 2 3 5 95 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505479 20505633 AGATCACTGGTAGCTTTCCC 59 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0300813 2 1 3 135 3L 20234198 20235896 TGGGTTAATAGAGCACATAGC 57 20235993 20236011 AGATCCACCCGTAATCTCC 58 NA InUTR Drosophila melanogaster 61 CG7290 FBgn0036949 FBtr0074858 2 1 1 164 3L 20199021 20199112 AGAAGCAAATAATGGGTGGAC 58 20198877 20198895 GGTAGTAGGTCGAGCAGTC 59 NA InUTR Drosophila melanogaster 61 Tom20 FBgn0036928 FBtr0074903 1 1 1 143 3L 19994340 19994358 TCTACTTCGACAAGAAGCG 57 19994526 19994960 GAAGGAAATATCTTTCGATGGC 57 NA Drosophila melanogaster 61 CG33255 FBgn0053255 FBtr0074997 2 1 1 125 3L 19417906 19417925 GAACTACAATGGAATCGCCG 59 19418010 19418409 TTTGGAATGAGAAGAACTAGCG 58 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 3 3 3 85 3L 19252660 19253224 ATTCTGGCAGGTTATCCGG 59 19252593 19252612 GCAAAGAACATGTGATGCAC 58 NA Drosophila melanogaster 61 CG14074 FBgn0036818 FBtr0075061 3 1 1 60 3L 18860061 18860079 CCTCCTCTCCTATAAGCGA 57 18860103 18860121 GATTTGTCCACCTCTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18811 FBgn0042134 FBtr0075098 1 1 1 121 3L 18664679 18664697 AAATACGATGCTGTCCTGG 57 18664521 18664594 TTTGCCAGGTTATCCTTGC 58 NA Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 3 2 2 118 3L 18106214 18106233 TGCTTACTGCAATAAGCGTG 59 18112923 18112941 GATCAGGGTGATCCTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7402 FBgn0036768 FBtr0075143 3 1 1 81 3L 17883324 17883418 TTACGCTGGTATGATTTCCA 57 17883459 17883480 GTTATTCAGCATGCCATTATCC 58 NA Drosophila melanogaster 61 CG5567 FBgn0036760 FBtr0075161 1 1 1 91 3L 17836431 17836452 CCAATCTCCTGGAATTATCCTC 58 17835644 17836379 GATCCAAAGGACACCATCG 58 NA Drosophila melanogaster 61 CG5577 FBgn0036759 FBtr0075162 3 1 1 90 3L 17833079 17833151 TTATGATTGGTGACTGCCTC 57 17833008 17833026 TTATTGTAACGACCCGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG7630 FBgn0040793 FBtr0075217 1 1 1 137 3L 17419056 17419074 CTCCACCATGAACGATCTG 58 17419173 17419252 CCAGAAGATTTCACGAATCCA 58 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075267,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075269,FBtr0075268 2 7 7 80 3L 16956841 16956859 GAGACCCTCATCCACATCG 59 16956900 16956979 CAATAGACCCTTGTGAATCACG 59 NA Drosophila melanogaster 61 Rh4 FBgn0003250 FBtr0075338 3 1 1 72 3L 16854988 16855006 CAGTTCTGGGATCGATTCG 58 16846292 16846313 CAAAGTTGTCCGAAAGATAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 3 3 3 81 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 l(3)73Ah FBgn0002283 FBtr0075311 1 1 1 80 3L 16582568 16582588 ATAACGCATCTCAAGAAGCTG 58 16582628 16582766 GTTGCACAGTATGTCGATCTC 59 NA Drosophila melanogaster 61 CG13062 FBgn0036603 FBtr0075368 2 1 1 110 3L 16307570 16307712 TCAGTTGAAAGTAGTGTCGC 58 16307785 16307803 TGGTGTGGATAGTAAGGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG5222 FBgn0036570 FBtr0075495 2 1 1 152 3L 16098582 16098662 TGCGATTGTATTGTCTCAGC 58 16098449 16098468 GATTGGACCACTTCAGTGAC 58 NA Drosophila melanogaster 61 mib1 FBgn0036558 FBtr0075520 1 1 1 121 3L 16000123 16000141 GAATCTGTCAGCAGCTGGA 59 15999961 16000040 CAGGACACATAGTCTGTTCCT 59 NA Drosophila melanogaster 61 comm FBgn0010105 FBtr0075579 1 1 1 118 3L 15720881 15720899 TATCTGTGGATCGGAGTGG 58 15716356 15720800 GCACGTATGTCCTTATTGCA 58 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 2 2 3 80 3L 15580157 15580176 AATGAGCCGAACACATTCTC 58 15579692 15580114 GTCCTTACCCTGTGAGTCC 59 NA Drosophila melanogaster 61 CG6888 FBgn0036490 FBtr0075644 1 1 1 60 3L 15201035 15201056 CTCAATATTAACCAAGTGGCTC 57 15201077 15201095 GATAACCACCGGATACCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 3 2 2 91 3L 15128052 15128070 AATCATCTGCGAATGAGCA 57 15127562 15127997 GAACTGAGAACCACTTCGT 57 NA Drosophila melanogaster 61 ind FBgn0025776 FBtr0075668 3 1 1 60 3L 15036392 15036410 TGAACCTCAAGGAAAGCGT 59 15036350 15036368 CAGTGGTGAGCTATTCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 3 3 3 81 3L 14981279 14981297 ACAATCCCTCATCGTTTGG 57 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 mop FBgn0036448 FBtr0075700 1 1 1 80 3L 14764772 14764858 TGGATTCGATTCACCTATCGT 59 14764712 14764730 TCATTGCCCTCTATCGCAG 59 NA Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075687 2 1 2 60 3L 14698866 14698886 AAGTGTTGTGAATTGCTCCTG 59 14698908 14698926 CATCCAGGTCGTTGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4613 FBgn0036427 FBtr0075725 3 1 1 105 3L 14513251 14513269 TACAGGTCCATGATCGTGG 58 14513093 14513111 GATCCCTGACGATCAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 1 7 7 80 3L 14407794 14407882 GGCTAAGGAAATTACGATCCA 58 14407734 14407755 ATTCGATCACCCTTCTTTAGAC 58 NA Drosophila melanogaster 61 CG17359 FBgn0036396 FBtr0075787 3 1 1 60 3L 13992022 13992043 GAGCCATCAGTACTTTGAACAG 59 13991983 13992005 ATACTCTATATCGTCCAGCTCCT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nplp2 FBgn0040813 FBtr0075839 2 1 1 97 3L 13349867 13349887 CTGCCCAAGAATTTCTTACCA 58 13349945 13350119 CTTGAAGAGACCCTCAACCT 59 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 2 3 3 81 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231801 13244264 GCCGGTATAATCCTTATTTAAGTGG 59 NA InUTR Drosophila melanogaster 61 CG14115 FBgn0036343 FBtr0075893 2 1 1 94 3L 13054326 13054402 ATCCTTTGGTCTACTGGCT 58 13054250 13054268 GCAGTGCATAGTTGGACTC 58 NA Drosophila melanogaster 61 CG32110 FBgn0052110 FBtr0075931 3 1 1 60 3L 12802394 12802416 GTGATCGAGGACATAAGAATCAG 58 12802433 12802454 GATCATGGTGTTCTTTGGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17153 FBgn0036248 FBtr0075992 1 1 1 86 3L 12111649 12111667 AAGTGCCATGTGGACTACC 59 12111714 12111796 CAACGAATCGTCTAGTTTAGGG 59 NA Drosophila melanogaster 61 CG14125 FBgn0036232 FBtr0076044 1 1 1 140 3L 11968019 11968104 GCAATGAAGTTGGTCTGGA 58 11968208 11968226 ATCCCAGGGATCATCAGTG 58 NA InUTR Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0076032 2 1 2 141 3L 11816324 11816342 GTATGAGGGCGTCAATGGA 59 11816447 11816767 GTGCTTCAACTTGACGGTG 59 NA Drosophila melanogaster 61 Gr68a FBgn0041231 FBtr0076118 1 1 1 60 3L 11745420 11745441 TCAAACAGGATCTTCAGTTCAC 58 11745459 11745480 AAGAGTGTTGAGTTGTCTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TfIIEalpha FBgn0015828 FBtr0076108 1 1 1 95 3L 11676422 11676441 TATGAAGGGTATGCGAGTGG 59 11676498 11676585 TCGACATCAGGAATCTTGGA 58 NA Drosophila melanogaster 61 CG32091 FBgn0052091 FBtr0076106 3 1 1 82 3L 11633283 11633760 GATTTCGGGTTTCAGACGC 59 11633804 11633824 GGTCGTCCTGAGTGATATAGC 59 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139,FBtr0076138 3 2 2 80 3L 11614516 11614597 CTAGAGGAGGCTAAGATCAAGG 59 11614457 11614478 CTGAACCTGGTATCGAATAAGG 58 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 3 2 2 76 3L 11438775 11438857 AAGATACTTTCTGCAGTCCC 57 11438896 11438914 CTGATTCAGAACCACCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6168 FBgn0036154 FBtr0076182 1 1 1 60 3L 11313885 11313905 GGATGTAGAGATGAACGTGGA 59 11313845 11313863 CATTCGCAGAACTAGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7949 FBgn0036107 FBtr0076270 3 1 1 99 3L 10876111 10876130 AAGGAAAGGGTATTAACCGC 58 10876241 10876265 CCGGGTCATTAATATTTCTGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32065 FBgn0052065 FBtr0076284 3 1 1 193 3L 10438608 10438626 GAGCTGAGAAGTGAAACCA 57 10439994 10440466 CTTGTCTCTTGGCGAACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG18179 FBgn0036023 FBtr0076388 1 1 1 60 3L 9632724 9632744 TGACAACTTTATCAGCCATCC 58 9632766 9632784 GATCAGACCGATGTCACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3408 FBgn0036008 FBtr0076426 3 1 1 115 3L 9501407 9501425 TTTGCGGTACTTAGACCTG 57 9501224 9501330 AGATGCTGACTGTATTCTTGG 57 NA Drosophila melanogaster 61 Uch-L3 FBgn0011327 FBtr0076472 1 1 1 107 3L 9469788 9469885 TATTCGCGAATTCGGATGC 58 9469699 9469719 TTGAACAGGAAGATCAGACCA 59 NA Drosophila melanogaster 61 Cpr67B FBgn0035985 FBtr0076455 3 1 1 214 3L 9397992 9398010 AAGTGCTACATCTTGGCTG 57 9398555 9398574 ATCACACGACCCATGTAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5660 FBgn0035942 FBtr0076560 1 1 1 175 3L 8957551 8957640 CCTTAAAGATGCGGCTAATGAG 59 8957397 8957417 GATTCCCGGTTACATTTGGTG 59 NA Drosophila melanogaster 61 Cp16 FBgn0000356 FBtr0076574 3 1 1 134 3L 8725307 8725325 AACCGTTATGGATGGGAGC 59 8725419 8725575 GTATTGGCTCTTCTTGAAGACTG 59 NA Drosophila melanogaster 61 se FBgn0086348 FBtr0076623 1 1 1 60 3L 8514310 8514331 TATAACTACGATCAGAGTCGCT 58 8514409 8514427 CTCGTTTCATGCGTTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13674 FBgn0035858 FBtr0076719 1 1 1 80 3L 8211938 8212022 TCAACATGAAATTCCTCGCC 59 8211877 8211895 CCAGAGGAGCCACAATACC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8012 FBgn0040832 FBtr0076699 2 1 1 183 3L 8208624 8208711 TCTTGATGTTCGCATTGTGG 59 8208857 8208875 CCATAAACCGGTGCATACG 59 NA Drosophila melanogaster 61 CG33276 FBgn0053276 FBtr0114530 3 1 1 84 3L 7633161 7633240 TTCAAGGAGATACTGTGCGA 58 7633040 7633058 AGCTCGTAGTCCAGTTCAC 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 2 2 3 60 3L 7460744 7460829 GCGAAATACGCATTTATGCC 58 7460852 7460870 GTCAGCATCATCTGCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 3 1 1 69 3L 6325574 6325592 ATTCATGTTCGAGGGAACG 58 6325246 6325264 GGACACGATGATCAGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8219 FBgn0035693 FBtr0077003 3 1 1 89 3L 6195697 6195715 CTCATAGAGCCACTGGTGG 59 6195768 6195840 CGATGATTGGCGAACTTCG 59 NA Drosophila melanogaster 61 Acp65Aa FBgn0020765 FBtr0077021 1 1 1 92 3L 6145673 6145775 TGAAATTGATGCTAGTCGTTGG 59 6145602 6145623 ATTCGTACTCAAGAACTTCCAC 58 NA Drosophila melanogaster 61 mthl2 FBgn0035623 FBtr0077088 1 1 1 80 3L 5598899 5598919 TTCGGATACCTGTTCCTACTC 58 5598959 5599039 AAAGTATCCCAAGAAACCTGC 58 NA Drosophila melanogaster 61 CG17030 FBgn0035584 FBtr0073374 1 1 1 60 3L 4980436 4980455 AATGGAGATCGACTTTCCAC 57 4980395 4980415 CGTGTTTATATGGATGCGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13707 FBgn0035578 FBtr0073357 1 1 1 66 3L 4838436 4838740 GAGCTTAGTGCTCGAATCC 58 4838388 4838406 GTGGTCGTCGTTGAATTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Gef64C FBgn0035574 FBtr0073345 2 1 1 146 3L 4792480 4792498 GTGGAATCACGACGAAGTG 59 4792608 4793934 TAATTGGCACTTGGCTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11350 FBgn0035552 FBtr0073307 1 1 1 72 3L 4482846 4482931 GAAATTCTTCTTGTTCTGCGC 58 4482965 4482983 GTACTGGCTAGATGGCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073341 2 1 3 95 3L 4298764 4307369 AACTGACTAAAGACGCCAC 57 4298687 4298705 TTTGGATTTCGCTACTCGG 58 NA InUTR Drosophila melanogaster 61 pav FBgn0011692 FBtr0073227 3 1 1 85 3L 4243630 4243648 TACTCGGTGTTTGTCACCT 58 4243695 4243773 TGCAAAGTCTTCTGTATACCC 57 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 2 6 6 80 3L 4098072 4098091 AAATCTTCCGAGTCTCAGGA 58 4097790 4098029 ACGATCGAACGATAGTTGG 57 NA Drosophila melanogaster 61 Rdh FBgn0064227 FBtr0073154 1 1 1 93 3L 3825573 3825591 ATTGTCATCCGTACCAGCA 59 3825648 3825666 TAGTTGCTAGTTGCTGCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32263 FBgn0052263 FBtr0073183 3 1 1 60 3L 3810494 3810514 CTCTACACATGGATGTTGGAC 58 3810454 3810475 AGCGGAAGTTAAGATATTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12029 FBgn0035454 FBtr0113134 1 1 1 106 3L 3646480 3646500 CAGTACGCATCTCAATTGGTC 59 3646568 3646752 TTGGTGTGGAAGGACTGAC 59 NA Drosophila melanogaster 61 CG12093 FBgn0035372 FBtr0073015 3 1 1 87 3L 2773294 2773406 ATGGCAAGAGCAATCTTGC 59 2773225 2773246 AAGCTGTGATTACTACTGATGC 58 NA Drosophila melanogaster 61 CG13810 FBgn0035313 FBtr0072870 2 1 1 82 3L 2186041 2186127 TCCGGATTTGTTGGTCCTC 59 2186173 2186191 TGTCGTACACATAAGCCGA 58 NA Drosophila melanogaster 61 CG42357 FBgn0259703 FBtr0299956 1 1 1 80 3L 2020865 2020884 TTTCTGGACGAAATCTGCTG 58 2020749 2020824 AGAGATTCCGGAAAGAAACAG 58 NA Drosophila melanogaster 61 CG13933 FBgn0035270 FBtr0072792 1 1 1 80 3L 1773522 1773594 GCTTATCAAGGAGAATGGAGAC 58 1773463 1773483 ATTAATGGCACTAGCAGAACC 58 NA Drosophila melanogaster 61 CG18173 FBgn0035265 FBtr0072796 2 1 1 62 3L 1736901 1736973 TGGGATTCGGTTTGTTGGT 59 1736857 1736875 CATAGTCGGAGATGCCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG17249 FBgn0035249 FBtr0072810 2 1 1 60 3L 1647023 1647043 GTAGAGGAGAAAGACGATGAG 57 1646983 1647004 GTTTCTCTATTTCTACGGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072726 1 1 2 175 3L 1322440 1322548 GACCATTGAGGATCAGCAG 58 1322283 1322306 CATTGTAGTAGGGATTGTAGTAGG 58 NA Drosophila melanogaster 61 CG13895 FBgn0035158 FBtr0072605 1 1 1 104 3L 707611 707899 GTACTCTGACAATGATGACACC 58 707528 707546 ATGTCGTACTGTCGGATGG 59 NA Drosophila melanogaster 61 CG13894 FBgn0035157 FBtr0072606 2 1 1 172 3L 694982 698872 AAACACTGGATATTCCAGTGGA 59 694831 694849 CAAGCATCCGATGATGCAG 59 NA InUTR Drosophila melanogaster 61 CG3371 FBgn0035153 FBtr0072610 1 1 1 275 3L 685136 685154 ACAAACAATGCGGATACGC 59 684543 684561 TTGATGCGATTGTCGAAGG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 1 2 2 83 3L 596198 596216 TTGCTAAACGACTGGTCGA 59 596260 596337 GGAAAGACGTTTATTTAGCAGC 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 1 4 4 80 3L 345202 345223 CTACGTCTATTCGAATTGCACC 59 345085 345162 GCGAAGAGATCATCACAACC 59 NA Drosophila melanogaster 61 mthl9 FBgn0035131 FBtr0072574 3 1 1 80 3L 330587 330605 ATCTACGAACTGCCACCAG 59 330466 330545 GCTAAAGGCATAGAAATGCGT 59 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 3 3 3 81 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307565 307583 TTTCGCAGCTCAAATTGCT 59 NA Drosophila melanogaster 61 CG32845 FBgn0052845 FBtr0072518 1 1 1 60 3L 272707 272728 CTGAAAGATGGCGAACTATCTG 59 272668 272688 GCAACAAGATGTGATAACCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841d FBgn0083016 FBtr0113524 2 1 1 60 2R 17218438 17218456 ACTAGCTTCGTGTGATGAC 57 17218479 17218498 ATGGATAAGACGCATCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3829 FBgn0035091 FBtr0072396 1 1 1 80 2R 20876132 20876207 ACACCATTCTGGAGAACCT 58 20876250 20876269 TGTCGTACTTAGGATCAGGG 58 NA Drosophila melanogaster 61 CG3492 FBgn0035007 FBtr0072294 1 1 1 61 2R 20360925 20360943 AAGGAGTTCCACAAGGGAG 59 20360968 20360986 TTGTACCGCTTTGACTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bs FBgn0004101 FBtr0290089 2 1 2 261 2R 20232189 20235744 ATGAAGAAGGCCTACGAGC 59 20235968 20235987 TTACTTTCGAGTCCTCGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 alpha-catenin-related FBgn0029105 FBtr0072148 2 1 1 88 2R 19845735 19845868 CTGTTAACAATCAACGCTTTCG 59 19845917 19845935 AATGTTCAGCAGGTGACCT 59 NA Drosophila melanogaster 61 CG30177 FBgn0050177 FBtr0072122 1 1 1 60 2R 19689672 19689692 GCCCTATGATGATTCATTCCC 58 19689711 19689732 CGGTTAAATTTGTCCAGTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 2 2 2 114 2R 19574386 19574559 GGAAGCTGTACGATGTTCG 58 19574637 19574655 AGTAGCTTCGCTTCGAGAG 59 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072031,FBtr0072030 3 2 2 107 2R 19273700 19273718 AAGAACCAATGGATCTGGC 57 19273540 19273558 CCATGCCTTCTTGTTCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3493 FBgn0034854 FBtr0072036 3 1 1 96 2R 19259826 19259847 GAACTTCCTCATACTCGAACAG 58 19259685 19259769 GTGTTGCATGGATACCAGG 58 NA Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044 3 1 2 112 2R 19206711 19206730 CATTTGATTCGGGCTTCCAG 59 19206521 19206539 CAACTTGGTGGTCAATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL22-like FBgn0034837 FBtr0072049 1 1 1 105 2R 19135237 19135308 TCTTTGGAGAATGAGTTCCC 57 19135151 19135169 TACAGGAGTCACCTTAGCC 58 NA InUTR Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 3 1 1 100 2R 18964558 18964631 CAGCATTGAGCTCAAGCAC 59 18964476 18964496 CACTGCTTACAATGGATCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071894 1 1 2 81 2R 18729645 18729744 CTGATAAGCACAATCGCGG 59 18729789 18729807 ATGAATACCACGTTGCCCA 59 NA Drosophila melanogaster 61 CG2852 FBgn0034753 FBtr0071933 2 1 1 158 2R 18533526 18533544 TTTGACATCACCATTGGCG 59 18533000 18533018 GAAGTCCTTGATGATGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071856 2 1 2 107 2R 18496116 18496199 CGGTTCTGCAATTGAAGCA 59 18496270 18496288 CTTGCTGTAGGCACTTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG11275 FBgn0034706 FBtr0071769 2 1 1 164 2R 18067443 18067461 GTTACGATTCTCGCGTGTG 59 18068873 18068891 GTGGAACACGCAATCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GlcT-1 FBgn0067102 FBtr0071755 1 1 1 60 2R 17964229 17964250 GATCAATAACATCCATCCAGGT 58 17964268 17964289 GTCTGAGATCATCACAAAGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071684 2 1 2 60 2R 17539012 17539030 TATACCGCAAACATCCGGT 59 17538970 17538988 TATTAGTGTGCTCCGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 2 2 2 187 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471452 17471473 GTTTGAGGGAGAGGTCATAGAG 59 NA Drosophila melanogaster 61 EfSec FBgn0034627 FBtr0071608 3 1 1 185 2R 17273333 17273410 ACTATTATAGGAGGTGCCCAG 58 17273168 17273186 TAGCTTCTCCAGCTTGGAC 59 NA Drosophila melanogaster 61 Magi FBgn0034590 FBtr0071636 3 1 1 81 2R 17017801 17017880 CTCGACAATAGGGAAACTAATACC 58 17017743 17017761 TACTGCCACTATGCGATCG 59 NA Drosophila melanogaster 61 CG13437 FBgn0034541 FBtr0086235 3 1 1 176 2R 16549613 16549633 GCGAGGATCACTATATGAACC 58 16549771 16549846 GAGGAGGTGCATTGATCAC 58 NA Drosophila melanogaster 61 CG13437 FBgn0034541 FBtr0086235 1 1 1 145 2R 16549644 16549662 AAACACGGAGAATCTGCAG 58 16549771 16549846 GAGGAGGTGCATTGATCAC 58 NA Drosophila melanogaster 61 CG11110 FBgn0034535 FBtr0086231 2 1 1 193 2R 16529355 16529373 TCTTTGGCAAGTCCTTGCT 59 16529595 16529613 GAGCGATATTATGTCGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 2 2 2 80 2R 16193969 16193988 TTCGGTATCAGTACCTGGGA 59 16193845 16193930 GTTTATAAAGTGCCACTCGATCC 59 NA Drosophila melanogaster 61 Ir56b FBgn0034456 FBtr0086465 3 1 1 120 2R 15396393 15396411 GCATCGTTATCCACGACTC 58 15396546 15396564 AAGAACAACCAGGCATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11007 FBgn0034455 FBtr0086464 2 1 1 62 2R 15390750 15390768 CTCCTGGCCATATCGTACC 59 15390794 15390812 AATAAATAGGCGGGTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18607 FBgn0034429 FBtr0086514 3 1 1 60 2R 15177200 15177220 CATCTATTCCATCGACTACGC 58 15177242 15177260 CGGTGTGAAGATCACTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 imd FBgn0013983 FBtr0086725 1 1 1 80 2R 14298300 14298318 ATGTCGGAAGGACAGATCG 59 14297821 14298258 CAACAGCTGGTATATCACCTC 58 NA Drosophila melanogaster 61 CG10914 FBgn0034307 FBtr0086745 2 1 1 60 2R 14047227 14047246 CAAGGAAACACTTTGACTGG 57 14047269 14047287 ATGATGGGAAGATGCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17680 FBgn0062440 FBtr0086781 3 1 1 75 2R 14035350 14035368 CACTTCCCATTAGCCTTGC 58 14035293 14035313 TGCAGGATCCTTAGGTTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 3 4 4 128 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020603 14021380 GAAACTTTGGCCATCCTTGG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994 1 1 7 80 2R 13248647 13249495 CTATGACAACTTCCAATTCTCTGG 59 13249533 13249552 GGCTGATAAACTGGAATGCC 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628,FBtr0114625 2 6 6 85 2R 12899045 12899128 GAGCAAATCGGTTCAACGG 59 12898978 12898998 AAGTTAATGCGATTCTGCGAC 59 NA Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 3 1 1 188 2R 12894008 12894307 TTAAGTTCGTGGAAGGCAC 58 12894459 12894477 TGTAGTTGAATGTCGCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051,FBtr0087052 1 2 2 60 2R 12843261 12843282 ACAGAGAAAGTGACTAAACTGG 58 12843303 12843321 CCAATTGTACCAGGAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 1 2 2 72 2R 12837575 12837657 GAATCCTTTCTCCTGTAGAGAC 57 12837524 12837543 GTTTCCGTATATTCTCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG5859 FBgn0025830 FBtr0087036 2 1 1 80 2R 12741182 12741200 TCTGCTGGAGTTCATCGTC 59 12741243 12741330 GTGCCCATCATAGAAATCGC 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 1 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 CG8060 FBgn0034113 FBtr0087178 2 1 1 81 2R 12206971 12207037 CCACATTGATCAAGCTTCCT 58 12206909 12206929 TCCTCGTTGTAAATTACCGTG 58 NA Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 3 2 2 84 2R 12153287 12153306 AAACTCTATCAGGATGCCGT 58 12153350 12153431 GCATTACAACTGTCAGTTTCGT 59 NA Drosophila melanogaster 61 CG30095 FBgn0050095 FBtr0087224 2 1 1 80 2R 12011136 12011156 AGCGGTATTCATCTCATCTCC 59 12011196 12011603 AAAGCATATGATGTAGGGCAC 58 NA Drosophila melanogaster 61 CG8414 FBgn0034073 FBtr0087255 3 1 1 111 2R 11987282 11987300 CCAGCAAGAATTACTCGCG 59 11987131 11987207 CGAACCACACCTATTCCCA 59 NA Drosophila melanogaster 61 CG33464 FBgn0053464 FBtr0087305 2 1 1 64 2R 11759747 11759765 AACCGAAGATTCCTCCTCG 59 11759701 11759719 TACTGTCCTCGGTATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30083 FBgn0050083 FBtr0300381 3 1 1 111 2R 11599758 11599837 TCAAATACTTGCCGTTCGTC 59 11599666 11599689 GCCTATATCGTTACTATAACTGCC 58 NA Drosophila melanogaster 61 CG12857 FBgn0033963 FBtr0087469 2 1 1 100 2R 10646917 10646995 TTTACCAATCCCAAGCTTAGTG 58 10646838 10646858 CTATGCATTTCGAGATCCTCC 58 NA Drosophila melanogaster 61 CG12860 FBgn0033954 FBtr0087480 3 1 1 65 2R 10553762 10553780 CATACCCTACAAGCCAGAG 57 10553715 10553733 TTGTCATCCAAACGTACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 conv FBgn0261269 FBtr0087540 3 1 1 80 2R 10159222 10159300 CTAGGATTCGGCATTCTAGG 57 10159341 10159361 AAATAGATCCTTGGGTAGCTG 57 NA Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 1 2 2 80 2R 10151028 10151106 CCTATACTCTGGCCCACTC 58 10150966 10150984 TGTTAATGGTGCGATTGCT 58 NA Drosophila melanogaster 61 Mdr50 FBgn0010241 FBtr0087537 2 1 1 80 2R 10139353 10139373 CTGATCAGGAGATCATCTCGG 59 10139414 10139495 TCGTATCATAACCCAAGGGC 59 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 2 4 4 97 2R 10060020 10060099 TGCTGAAGTGTGCTTTCCT 59 10060160 10060178 TTTCAGGAAGTAGGGTCGC 59 NA Drosophila melanogaster 61 pea FBgn0086895 FBtr0087518 1 1 1 210 2R 10043921 10043995 CAATCAAGCGGAAGGTGAC 59 10044169 10044187 CTTCTGAATGCGCACAGAG 59 NA DesignRelaxed Drosophila melanogaster 61 fas FBgn0000633 FBtr0087625 2 1 1 85 2R 9606712 9613060 GTGTGCGATTTGATTCGGT 59 9613109 9613127 CTTGTTGGGATTGTGCGAG 59 NA Drosophila melanogaster 61 CG12464 FBgn0033861 FBtr0087652 3 1 1 60 2R 9496441 9496459 ACTTTGAACACAACTGCCT 57 9496399 9496417 CAATCCGATAGGTGGATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 1 2 2 80 2R 9391976 9391995 ACTTTACGCGTTACTCAGTG 58 9392037 9392113 CTTCTTTAACCGTCGTCTGC 59 NA Drosophila melanogaster 61 CG34312 FBgn0085341 FBtr0112510 3 1 1 80 2R 9097614 9097633 TTCATTTATGTTTGCGTCGC 58 9097450 9097573 GTAAATGGCTACACCAAATCC 57 NA Nonspecific Drosophila melanogaster 61 Psc FBgn0005624 FBtr0087798 3 1 1 88 2R 8862096 8864836 AGTGTCTGCACTCCTTCTG 59 8862026 8862045 GTTGTTGATGACCATCTCGC 59 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 1 3 3 67 2R 8810274 8810292 ATGCTCTGCAAACGTTCTG 59 8810391 8810409 ATACTTGAACCAACGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17580 FBgn0040755 FBtr0087857 1 1 1 265 2R 8694365 8694383 TACTTCACCCTCAAGTCGG 58 8694667 8694685 AGGCAAATGTAGACTGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12374 FBgn0033774 FBtr0087854 2 1 1 87 2R 8649742 8649762 CACTTCCGTATCTATCAGCTG 58 8649811 8649900 GGAAGTGCACAGAGATGTG 58 NA Drosophila melanogaster 61 CG13151 FBgn0033750 FBtr0087939 3 1 1 61 2R 8403835 8403853 CCAATGCAGTGGTAAGCAG 59 8403875 8403896 GCAGATCAGTTGTTCTACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13160 FBgn0033720 FBtr0087911 2 1 1 80 2R 8261764 8261845 ACTTCATGCAAGTGCATCG 59 8261887 8261907 CCAGATGGAAGTAGTAGCCAG 59 NA Drosophila melanogaster 61 CG13183 FBgn0033667 FBtr0088054 1 1 1 82 2R 7793766 7793857 AAAGCTCTTCAGGGATCAC 57 7793702 7793721 AGACAATTATCTTGGCCCAG 57 NA Drosophila melanogaster 61 Sobp FBgn0033654 FBtr0088064 1 1 1 61 2R 7717930 7725408 AGATAAAGGAATTCGCGCAC 59 7717888 7717906 ACCCTCGAATCCATACCAG 58 NA DesignRelaxed Drosophila melanogaster 61 betaTry FBgn0010357 FBtr0088122 1 1 1 60 2R 7234353 7234371 TGTCAACGTGAACATCGTC 58 7234395 7234413 GTTTCCGTAGCCATAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fpps FBgn0025373 FBtr0088170 3 1 1 80 2R 7194455 7194777 GAAGACTAGCAGAACCTTATCG 58 7194396 7194414 CTCTCATCTTTCGACACCG 58 NA Drosophila melanogaster 61 CG30033 FBgn0050033 FBtr0088117 3 1 1 86 2R 7180079 7180097 CAGCTTGTGTCTCTTGGTG 58 7180147 7180224 GTGAAGTATGCTCCCACCT 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299830 2 1 17 74 2R 6172253 6172271 AGACGAGCATCGTGAAGAC 59 6172917 6172935 ATTCGGAATCTGTGGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1371 FBgn0033482 FBtr0088428 1 1 1 80 2R 5962842 5962981 GTGGAGATCAAACTGCTGAC 59 5962781 5962803 CAGGAAGTAATATCCGTTAGAGG 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0112902,FBtr0112901,FBtr0088437,FBtr0088439 2 5 5 87 2R 5885978 5885996 TCTTGAAGTCGGCCTTCAG 59 5885841 5885927 CGTTCGTAGTTCTGCAAGG 59 NA Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467,FBtr0302051 1 2 2 84 2R 5594446 5594539 CTTTAAAGATCACATACGACCC 57 5594584 5594602 CATGTAGGATTGTCCCAGC 58 NA Drosophila melanogaster 61 Rad51C FBgn0033389 FBtr0301527 2 1 1 83 2R 5053416 5053434 GGAATTGTCTCTGTTGCCA 58 5053480 5053558 TTGTCCAACTCTTCGATTCC 58 NA Drosophila melanogaster 61 CG13747 FBgn0033364 FBtr0088660 3 1 1 62 2R 4905717 4905802 GCTACTGATCAATTTGTTGACC 58 4905825 4905843 ATGTTGATCAGCGACAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13748 FBgn0033355 FBtr0088656 2 1 1 79 2R 4827989 4828007 AAAGAGTACGTTGGAGTGG 57 4828050 4828068 TAGAGGTCCATGGGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8586 FBgn0033320 FBtr0088725 2 1 1 161 2R 4582747 4583229 TAGCACATAGTTTCCCACCA 58 4582605 4582623 AATCATCCGAGTCTTCGCA 59 NA InUTR Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 2 1 1 60 2R 4337447 4337531 CGATGTGATCATCTATTCACGAC 59 4337409 4337433 GTTGAGAACGATTACATAGAGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088814 2 1 4 123 2R 4035889 4036441 CTCAGTAGGATCAGTAACAGG 57 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 slv FBgn0025469 FBtr0088824 2 1 1 121 2R 3968630 3968648 TGATACGGGCGAAGAACTC 59 3968456 3968550 GTTGGGAATCTGGATAAATGAGTC 59 NA Drosophila melanogaster 61 CG14762 FBgn0033250 FBtr0088867 3 1 1 80 2R 3898587 3898684 TATCACCGATAACCCGCTG 59 3898525 3898543 TCGTCCTTGTTCTTCAGGT 58 NA Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 2 2 2 118 2R 3715845 3715925 CTACCAAGTGGAGTACGCC 59 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CanB2 FBgn0015614 FBtr0088930 1 1 1 61 2R 3674029 3674744 GAAATGTGTTCCAATTTCGACG 59 3674766 3674784 AGTTTCCGGAAACGTTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 1 3 3 98 2R 2884361 2884442 ATGTCCATGACGTACTCGA 58 2884503 2884522 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 CheB42c FBgn0066292 FBtr0086191 1 1 1 80 2R 2832494 2832515 GTTTAAGTACTGGACCAAACAC 57 2832365 2832453 ATTATAACGGTACCACGCG 57 NA Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 1 2 2 80 2R 2811097 2811115 GAAAGTCATCGTTACCGCC 59 2811159 2811397 GTGTAGATGCGCTCATCCT 59 NA Drosophila melanogaster 61 CG9430 FBgn0033097 FBtr0086138 1 1 1 60 2R 2606181 2606199 TTTACTCTCGTCGATGGTG 57 2606139 2606159 ATGCTTACTTGCTATCTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7849 FBgn0033060 FBtr0085977 3 1 1 109 2R 1964779 1964798 CTATCCGACCACCTTCTGTC 59 1964870 1964937 ATCCCAAAGAGCAGGACTC 59 NA Drosophila melanogaster 61 CG7856 FBgn0033056 FBtr0086024 1 1 1 60 2R 1946195 1946213 CTGACTACCGAACAGACAC 57 1946153 1946171 GCCAAATTGCATGTCACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gp210 FBgn0033039 FBtr0086044 2 1 1 80 2R 1659477 1659575 CAAGACGATACATTTGGTGACTC 59 1659615 1659633 CGACAAAGCATTCGATGGG 59 NA Drosophila melanogaster 61 CG30441 FBgn0050441 FBtr0299872 1 1 1 132 2R 1239540 1239558 CCAAACCTTTCCAGTAGCA 57 1239426 1239445 CCTTATCGACATCTTTGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His-Psi:CR33802 FBgn0053802 FBtr0091806 1 1 1 60 2L 21418954 21418975 TAGAATTATTCCGCGTCATCTG 58 21418995 21419014 CAGCTTGTTTAACTCCTCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 2 2 2 65 2L 22842560 22842636 GTGTGAAAGTTCAGAACATTCC 58 22842516 22842534 TTTGACGTTGAGTTCGCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 2 3 3 80 2L 22818638 22820175 CATTGTGGATCCAATCTCGA 57 22820218 22820236 ACAACCAATTGCTTTGCAG 57 NA Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111259 1 1 4 166 2L 22431287 22432689 GTGCATGCTTTGAGGTACC 59 22432816 22432837 AGTGAATTGACTTCCAAGACTG 58 NA InUTR Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 2 2 2 144 2L 22239991 22240009 CCAGGTGAAGTTAATGGCG 58 22240183 22240201 GCAATCCTACTCGCTTTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 3 3 3 81 2L 21742572 21742590 CACGGACACATGCTATGTG 59 21742266 21742530 GGGTTTGTCTTTAACAGATGGA 58 NA Drosophila melanogaster 61 CG8678 FBgn0032935 FBtr0081487 1 1 1 98 2L 21213158 21213232 GCAATGTCTGATTCTGCCA 58 21213078 21213096 GGTAATTGCCACTGGAGGA 59 NA Drosophila melanogaster 61 CG31680 FBgn0051680 FBtr0081383 2 1 1 122 2L 20640182 20640272 TCTGGGCTTTGTTCTAAGTG 58 20640357 20640375 ATCCACTGGTAGAACTCGG 59 NA Drosophila melanogaster 61 CG2493 FBgn0032864 FBtr0081363 1 1 1 60 2L 20462665 20462684 GAAACTCTTCGAGACTCTGG 57 20462624 20462643 GAATGCATCCGATATCTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0081361 3 1 2 127 2L 20451264 20451373 TGTTGTGTAATAGGTGGCCA 59 20451463 20451481 GAGTAGTCTACGGCCACTG 59 NA Drosophila melanogaster 61 CG18806 FBgn0042129 FBtr0081307 1 1 1 60 2L 19966028 19966049 TGTCGTTCAGCTATTCATACAG 58 19965989 19966009 GTTTCTTTCCAGGATCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 2 3 3 89 2L 19733220 19733238 CAAACGTTTCCGAACTCCT 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 CG15168 FBgn0032732 FBtr0081135 3 1 1 114 2L 18987820 18987838 TAATTGCCGGATTTGCCAG 58 18987980 18988067 TGCAGGATAATGTCCAATGG 58 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 2 2 2 87 2L 18836577 18836595 GATGATCGAGGATCGGACC 59 18836434 18836527 TTTCAGTATGCCAACTGCTG 58 NA Drosophila melanogaster 61 CG7180 FBgn0032673 FBtr0081061 2 1 1 60 2L 18183966 18183985 CCGAACACCATCAAACTGAG 59 18183925 18183946 GCTTTATCCTTTCAAACGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31804 FBgn0051804 FBtr0080967 3 1 1 60 2L 17363798 17363818 TCGAAAGCTAGTCAAGACCTG 59 17363840 17363858 TTTGCTTCTGTGGTTTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 1 1 1 102 2L 17182587 17183038 TAAAGTACTCCCAACCGGA 57 17183102 17183122 ATATCCTGGTGGACATTACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0302189 2 1 2 67 2L 16876201 16876219 GTCATTTCGACCATGTCCA 57 16876248 16877514 CCTTTAGGATGTCAGCTTCTC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31739 FBgn0051739 FBtr0080919 1 1 1 80 2L 16827881 16828061 CTTTCAACATGGGTGGTCC 58 16828104 16828123 TCATATTGAAGTTGCTGGCC 58 NA Drosophila melanogaster 61 CG13280 FBgn0032609 FBtr0080931 2 1 1 80 2L 16803196 16803283 TGTCCAAATGTCGATGTAGTG 58 16803136 16803154 GTCGTGGTTCAACATCAGG 58 NA Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080772,FBtr0080771 3 2 2 231 2L 15750842 15750860 CAAACAGTGGCTGAAGGAC 59 15750559 15750578 GTACTTGAAGTAGTAGGCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0100163 2 1 2 81 2L 14812301 14812321 GAAGTGAACCACTATAGGCAG 58 14812362 14813399 CACCTATGTATATTCGCCGAG 58 NA Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559,FBtr0080558 1 2 2 210 2L 13934640 13934659 ATACAAGCCCATCTTGATCG 57 13933648 13933666 GATGGTCCGTATCCGTAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acyp FBgn0025115 FBtr0080555 1 1 1 60 2L 13912482 13912500 TCATATCAAGCCCGATCCG 59 13912524 13912542 GGAACTACTGCCCAATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 3 1 2 299 2L 13782945 13783014 CTAAATGCGCTGGTCAAGG 59 13782664 13782682 CTCTCGGCTTATATCGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9302 FBgn0032514 FBtr0080470 2 1 1 80 2L 13376972 13377053 TGTTCTATGCACCCTGGTG 59 13376910 13376928 GATCATCCTGTAAGGCCGT 59 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 2 3 3 81 2L 13171658 13171751 AATACTCAGTCGGTCAAATCG 58 13171597 13171615 TTAGCTCCAGCTTGATGCT 59 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 2 3 3 247 2L 12976592 12976610 CTACAAGGTCGACGATGTC 57 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5525 FBgn0032444 FBtr0080411 1 1 1 80 2L 12690664 12690684 GTCAGTATTTCGTCGATCACC 59 12690541 12690625 ACTGAAGGTGTTGACAATATCG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 2 1 8 116 2L 12458207 12460590 AAGATCTGGTCAAGTCGCA 59 12458109 12458127 GAATGCTGTTCTCGAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6712 FBgn0032408 FBtr0080364 2 1 1 60 2L 12095686 12095705 TGATCGTTAACGAAGATCGC 58 12095645 12095664 CCATTGGGCAGATGAATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 2 3 3 81 2L 12037204 12037222 AACTTTCCATCTGCTGTGC 58 12037051 12037161 GGGATCAGCATAGTCATTAGC 58 NA Drosophila melanogaster 61 Vm32E FBgn0014076 FBtr0080216 1 1 1 73 2L 11171348 11171366 AATTTCACCAGCGCATTGG 59 11171293 11171311 TTGACCCTGGATTCCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 1 1 1 147 2L 11016283 11016301 GAGCAGTCAGGAGAACCAG 59 11016412 11016496 AACCTGTGGTCAGATCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14071 FBgn0032312 FBtr0080178 2 1 1 60 2L 10888487 10888508 CTCGGTAGCATTATCAACAAGC 59 10888448 10888467 CCGCATCCAGGTAAATAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17086 FBgn0032310 FBtr0080142 1 1 1 127 2L 10853664 10853682 GTTCTTCACCTGCCAATGC 59 10853773 10853845 TAGTGTCCGGTTCTGTTGG 59 NA Drosophila melanogaster 61 CG17085 FBgn0032309 FBtr0080141 2 1 1 60 2L 10851591 10851609 GAGAGTGCCAGGTCTTCTC 59 10851633 10851651 CCATCATCGCTCACATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7300 FBgn0032286 FBtr0080125 3 1 1 60 2L 10695901 10695919 AGCTGCATCTATTGGTGTC 57 10695859 10695878 TCCCTTAGAAGCGGAATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trim9 FBgn0051721 FBtr0080096 3 1 1 80 2L 10620111 10620129 ACAGACGCGAATATCTGCT 59 10620170 10620320 AATTCGATTGTTGGTCCTTGAG 59 NA Drosophila melanogaster 61 Lip4 FBgn0032264 FBtr0080093 3 1 1 81 2L 10529737 10530086 ACACTTGAATACCTACAGTCTG 57 10530126 10530146 GATGTATCCATCATCCGTCTC 57 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021,FBtr0080022 2 3 3 60 2L 10427353 10427372 GGTGATGAAGGTGTTGTTCC 59 10427392 10427413 CTTCACGTACATCAAATACACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdc2 FBgn0004106 FBtr0080051 3 1 1 115 2L 10386116 10386135 TATGGCGTGGTGTATAAGGG 59 10385635 10386039 GAAATTTCTCTGATCGCGGT 58 NA Drosophila melanogaster 61 CG4968 FBgn0032214 FBtr0079987 1 1 1 80 2L 10307055 10307076 TTACCCATAATGATGGCAATCG 59 10307117 10307209 GAGTTGTGTCGCTGATCTC 58 NA Drosophila melanogaster 61 CG34043 FBgn0054043 FBtr0300408 3 1 1 90 2L 10280114 10280133 AGAATACAGAGATTGCGGAC 57 10279677 10280063 AATTCCTCCACTATTTCTGCG 58 NA Drosophila melanogaster 61 trk FBgn0003751 FBtr0080078 2 1 1 60 2L 10271763 10271781 CTCGTCGAAGATCAACTGG 58 10271721 10271739 CGAACGGATATAGCGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31873 FBgn0260750 FBtr0079986 1 1 1 80 2L 10270144 10270163 TTGGAAGAAATGCACGTTCG 59 10270203 10270285 TGTTGTTCAATCTCGATGTGAG 59 NA Drosophila melanogaster 61 CG5731 FBgn0032192 FBtr0079959 2 1 1 80 2L 10207543 10207562 ACTCCATCGGATATTTCGGT 58 10207419 10207501 TTCGTAAAGGTCCTCCACTC 59 NA Drosophila melanogaster 61 CG5924 FBgn0032154 FBtr0079911 3 1 1 99 2L 9892457 9892645 GAACATTGAAACGCATTGCG 59 9892377 9892397 AAAGATGAGCTCTTTGAAGCG 59 NA Drosophila melanogaster 61 CG17855 FBgn0032124 FBtr0079830 2 1 1 81 2L 9541568 9541646 CCCATAGCCTCATACAAACTG 58 9541689 9541707 ATTGTTCTTTGACAGCGGG 58 NA Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 2 1 1 97 2L 8376550 8376634 AAGAGGCGCAGTACTTCTC 59 8376471 8376489 TTCATTGCACCATAGCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8668 FBgn0031988 FBtr0079576 1 1 1 95 2L 8132115 8132135 CATACCCACTTCCAATTTGCA 59 8132192 8132610 ATATCCGATGGATTGCCCG 59 NA Drosophila melanogaster 61 CG8683 FBgn0031985 FBtr0301229 2 1 1 80 2L 8120743 8120762 GAAGCCATTACCTACCTGGT 59 8120572 8120703 TGTTTGTAGTTCCATGTTCTCC 58 NA Drosophila melanogaster 61 CG14532 FBgn0031966 FBtr0079555 1 1 1 60 2L 7899538 7899557 GTCTTATGTCCATGTCCGTC 58 7899497 7899517 CGCTTGACGATAAGATCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6055 FBgn0031918 FBtr0079449 1 1 1 283 2L 7466671 7471555 GCTATCCAAATATGTCTGTGC 57 7471800 7471818 AAAGTCATTCTCCTGTGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 2 4 4 80 2L 7444381 7444468 TCATTATCGATATGGAAGGGCT 59 7444509 7444527 TGTAATCCAGCAACATGGC 58 NA Drosophila melanogaster 61 CG15818 FBgn0031910 FBtr0079442 2 1 1 60 2L 7411306 7411324 ATCGAAGGCAATCAGACAG 57 7411348 7411366 TTTCCGTCCTCTTCTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300460 1 1 2 91 2L 7257630 7257708 GATTCTTGACAACAAGGTGC 57 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 TTLL3A FBgn0031854 FBtr0079305 2 1 1 98 2L 6737651 6737669 GAGATCAACTCCAGTCCGG 59 6737520 6737591 GCGATCGATAACAACCTTGAC 59 NA Drosophila melanogaster 61 osm-6 FBgn0031829 FBtr0079333 1 1 1 86 2L 6556351 6556425 CAATGATGTGGAGCTGAGC 59 6556283 6556301 ATCGAATCGATCAGGCAGG 59 NA Nonspecific Drosophila melanogaster 61 CG9550 FBgn0031826 FBtr0079286 3 1 1 81 2L 6497655 6497673 CCCATTCATCAACATGGCG 60 6497715 6497798 GTTCAGATTTAGGTCTTTGCGT 59 NA Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 2 2 2 80 2L 6445909 6445931 GAAGGATATGGACACAATTCTGC 59 6445787 6445872 TTAAGTAGATTGAGCGGATCCA 59 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 1 2 2 135 2L 6051897 6051915 AAGACTCCAGGTCAGATGC 59 6052010 6052089 CATATCGGTACTTCTCTTCTGTG 58 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 3 4 4 95 2L 5976673 5976693 GTACATTTACCTTTCCGGCAC 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 sip1 FBgn0024191 FBtr0079134 3 1 1 87 2L 5721167 5721186 TAACGGACTACGATCTGGAC 58 5721235 5721305 GCCCAAATACCGTAGATCTG 58 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118,FBtr0079120,FBtr0079119 2 3 3 85 2L 5580997 5581015 TAAATCGTCCCTGACGACG 59 5580870 5580888 TGACTTTGCCCAGAAATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079105 1 1 2 70 2L 5554256 5554274 TATGGCACTTCTAGAGCGC 59 5554352 5554373 CGATGGTCTATGAGTAAATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp28d2 FBgn0031688 FBtr0079061 2 1 1 85 2L 5207896 5207914 GTTCGTGTTAACTGGCGAC 60 5207963 5208038 GATAAACGGCCTTGACTCG 59 NA Drosophila melanogaster 61 CG34124 FBgn0083960 FBtr0110838 1 1 1 80 2L 4964236 4964309 TGGACCAGATTGAATGCCT 59 4964350 4964371 CGAACTCGTAATTGATTTGCAG 59 NA Drosophila melanogaster 61 Sgs1 FBgn0003372 FBtr0077393 2 1 1 115 2L 4937414 4937432 AATAGCTCCACTGCAAGGA 58 4937576 4937594 TGCATACTATCCCAGTCGT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 1 6 6 103 2L 4909614 4909686 ATTCTATGGGTTTCCGCTG 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 CG15625 FBgn0031644 FBtr0077390 3 1 1 81 2L 4890298 4890319 TTCGATATTCGAATGGGATGAC 59 4890359 4890440 CCGGAAAGTGTTCATGTACTG 59 NA Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 1 2 2 151 2L 4837521 4837609 CGATAAAGAACATCACCCTGG 58 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 CG31776 FBgn0051776 FBtr0077522 1 1 1 80 2L 3470612 3470632 AGACTTCTATGCCGAACTCTC 59 3470673 3470745 CGTTTCCGGCAACTTATAGG 59 NA Drosophila melanogaster 61 CG17259 FBgn0031497 FBtr0077667 1 1 1 60 2L 3035807 3035825 GGAGACCCATCAGACAGAG 58 3035765 3035785 CGGCATGTACTTCTTCAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2975 FBgn0031468 FBtr0077619 2 1 1 96 2L 2842011 2842029 CGCTTCATTCCTTTCTCCC 58 2842088 2842169 AGTCACTGGAGTTATCTGGG 58 NA Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 2 2 2 82 2L 2810574 2810592 GATCAGCAGAAGGACTCCA 58 2810637 2811161 TTCATCCACTCATCTTGCAC 58 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 Nplp4 FBgn0040717 FBtr0077817 1 1 1 164 2L 2008532 2008681 GTTCAAGCTGCTGGTTGTC 59 2008808 2008827 TAGTATCCTCCGGAGTAGGC 59 NA Nonspecific Drosophila melanogaster 61 CG31664 FBgn0051664 FBtr0077895 3 1 1 81 2L 1825124 1825194 AAATAACAGGGTCGTGGTG 57 1825061 1825080 CAGAAGTTCACCTTCTTGGA 57 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 3 4 4 82 2L 1695513 1695531 AATCGGAGCGAAACAATGG 58 1695575 1695657 GGCTCCGTTATCTGTAGACTC 59 NA Drosophila melanogaster 61 a5 FBgn0011294 FBtr0077922 1 1 1 80 2L 1329261 1329282 GATAATGAAGGAAATGGAGGTG 57 1329322 1329398 GTGTTGTCGTACTTGATCCT 58 NA Drosophila melanogaster 61 CG31922 FBgn0051922 FBtr0077965 2 1 1 81 2L 1170349 1170422 TGAAGCGTTACGAGGATCC 60 1170465 1170485 CAGTAACTGCCAAAGTATCGC 60 NA Drosophila melanogaster 61 CG8128 FBgn0030668 FBtr0074053 3 1 1 81 X 15592706 15592796 AAGAGCATACTCGTCCTCC 58 15592841 15592859 TGTTACTCCGGCAAATCGA 59 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 2 4 4 81 X 12550120 12550139 GAACTATTGTCGTAGCCTGC 58 12550183 12550382 CGTTCTGAACAGTATGCGG 59 NA Drosophila melanogaster 61 dy FBgn0004511 FBtr0073612 2 1 1 60 X 11666762 11666780 TACCAGCACAATATGCCAC 57 11666609 11666738 GGTGATTGTTTCGCATGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2124 FBgn0030217 FBtr0071491 2 1 1 130 X 10491961 10491979 TGGTCACAGTGGTTATCGT 58 10492072 10492357 CCAATAGATCACCAGTGGCT 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 3 2 2 135 3R 25323834 25323855 GGGCCTGCTTAAGTTTATACAG 59 25323949 25324037 GCCCATAACAATGATCTTGCA 59 NA Drosophila melanogaster 61 E(spl) FBgn0000591 FBtr0084961 2 1 1 72 3R 21866398 21866416 GCGTCTACAAGAACTTGCA 58 21866452 21866470 CAGTCCATCGAGTTCTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13646 FBgn0039255 FBtr0084751 3 1 1 122 3R 20774539 20774559 CCTTCTATGTGATGCTCATCC 58 20774642 20774797 GTTTGAAGGAGAGGGATTCC 58 NA Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 1 1 1 124 3R 14231131 14231212 CCCATCAAGATTGTCAGGG 57 14231300 14231318 TAGTTGTCGTTCAGGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 3 2 2 98 3R 14113251 14113327 AAAGCTGTCCTATCAACCGA 59 14113172 14113190 GTGGTCATCGCATACATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14867 FBgn0038333 FBtr0083095 2 1 1 147 3R 11206921 11206939 GATGCACCATCATCAGTCG 58 11207050 11207235 TATTTGTGCCAGGGTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8436 FBgn0037670 FBtr0081977 2 1 1 80 3R 5085048 5085359 GGCTCCTAGGATAAAGATCCAG 59 5085400 5085418 ATGATCTCCTTGCCTTCGT 58 NA Drosophila melanogaster 61 Poxm FBgn0003129 FBtr0111026 2 1 1 240 3R 4158852 4158871 CTTCAATCAATTGCCATCGG 57 4146429 4146447 TAGTATGGAGCCCGTTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Psi18S-1397 FBgn0083044 FBtr0113606 3 1 1 66 3L 5756022 5756041 TTGCCAGAACAAATTCCAGG 59 5755975 5755993 ATGTTCAGACAGAGGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ugt FBgn0014075 FBtr0075064 2 1 1 98 3L 18866271 18866473 CGAATATGATACCGAGTCGC 58 18866534 18866552 GATACCACCAGCCTAAGCA 59 NA Drosophila melanogaster 61 Msh6 FBgn0036486 FBtr0075646 2 1 1 84 3L 15150122 15150207 GCCAGTATTGTTCCTTAATGAG 57 15150059 15150077 CTTAAGGATTCCACCCAGC 57 NA Drosophila melanogaster 61 CG13474 FBgn0036439 FBtr0075711 3 1 1 60 3L 14690018 14690037 TTCAACTGAGCAATAGCGAG 58 14689977 14689999 GAGTCACAACTTCCTATAGACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010,FBtr0076009 1 2 2 80 3L 12266641 12266662 CCAGAAGATTCAAATCATGCAC 58 12266126 12266601 TCGGATTCAGCAATGTTCTG 58 NA Drosophila melanogaster 61 CG5644 FBgn0035948 FBtr0076556 3 1 1 92 3L 8971374 8971461 CTAGTGATGAAGAAACTTGCAC 57 8971303 8971322 AAGATGATCAGCATGGAAGG 57 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 2 2 2 80 3L 4861669 4861747 GGAGAAGATATCTCACATGCAG 58 4861788 4861806 TCCAAATCGTATCGGTGGA 58 NA Drosophila melanogaster 61 CG13912 FBgn0035186 FBtr0072625 1 1 1 130 3L 1189809 1189895 TGTCACATACTGTGAGGGTC 59 1189988 1190006 ATCGTATTCCGGCTTGAGG 60 NA Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 3 2 2 82 2R 20011160 20011178 CATCATAAGCGATCGCGTG 59 20011037 20011114 AGTGGCAGAACTTGATGGA 59 NA Drosophila melanogaster 61 CG18540 FBgn0034326 FBtr0086762 2 1 1 102 2R 14187044 14187063 ATGAATCTGCGAATTGAGCG 59 14187128 14187207 TACGCATCTCGACCATCAC 59 NA Drosophila melanogaster 61 CG1688 FBgn0027589 FBtr0088495 1 1 1 89 2R 5660106 5660124 GCTAACAGTGAGACGAGCT 59 5659926 5660053 TTGACAGGCATCTCCTTCC 59 NA Drosophila melanogaster 61 CG31800 FBgn0051800 FBtr0081179 2 1 1 97 2L 19033921 19033997 TCACCGGAAGAATGGAGTC 59 19033842 19033862 TCCTTAATCTTGTCCAGTGGG 59 NA Drosophila melanogaster 61 CG4497 FBgn0031895 FBtr0079418 1 1 1 83 2L 7192046 7192505 ATATTCACGGAAAGTCGCG 58 7191981 7191999 GTCAAAGGTTCCGGAATCG 58 NA Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 2 2 2 152 2L 4837523 4837610 GCGATAAAGAACATCACCCT 58 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 Drp1 FBgn0026479 FBtr0077744 2 1 1 117 2L 2582102 2582184 CGATGTCATCGAACACCTG 58 2582003 2582022 CTGCAAGTTGTCCTTAACGT 58 NA Drosophila melanogaster 61 CG15824 FBgn0031292 FBtr0078029 2 1 1 86 2L 884831 884915 CAAGGAATACTACAGTGAGTACTC 58 884768 884787 ACCCTAAAGCACTTGTTGTG 58 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 3 3 3 87 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831774 831793 CAGTACATGTTCTGCTCCAC 58 NA Drosophila melanogaster 61 CG11835 FBgn0031264 FBtr0078076 3 1 1 60 2L 562609 562627 GAAGCAGTCAGCGAAAGTG 59 562567 562588 CTGTTTCTCTTTGGGATTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1389a FBgn0083046 FBtr0113525 3 1 1 64 2R 17221519 17221540 CCTTTGGAAAGTAGACTTTCAG 57 17221565 17221583 GAGTGATACAATCGTGGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 2 2 2 80 2L 6652431 6652503 GCTCATTAGAAAGGGATCTGG 58 6652545 6652563 GACCGTTAAGGACTTCGGA 59 NA Drosophila melanogaster 61 CG11190 FBgn0030035 FBtr0071175 1 1 1 95 X 8300893 8300911 TAGTGGTTCGTCCATTGTC 57 8300608 8300836 GGGTGTGGTAAAGATTATCCT 57 NA Drosophila melanogaster 61 CG33702 FBgn0053702 FBtr0091690 1 1 1 80 3L 9506046 9506140 TCGTGTCCATATACAGAGAAGG 59 9505987 9506008 AAAGGATAACAGATCCTTCAGC 58 NA Drosophila melanogaster 61 CG5873 FBgn0038511 FBtr0083442 2 1 1 80 3R 13267089 13269471 AATTGGCCCGAACATATGG 58 13269515 13269533 GAATCAGCGTCTTTGAGGT 57 NA Drosophila melanogaster 61 CG6770 FBgn0032400 FBtr0080306 1 1 1 60 2L 12045946 12045964 CCACTTCGATGAGTACGAG 57 12045904 12045922 GTGTCCAGAGAAGATGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633,FBtr0300516,FBtr0300513,FBtr0300514,FBtr0300512,FBtr0299632,FBtr0300511,FBtr0300515 2 8 8 85 X 10172044 10172132 GCCTTTAGATTCAGCGAAGC 59 10171978 10171996 CTCTCGAAAGTCTCTGGCC 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 3 10 10 97 3R 22380649 22380960 ATACGCTAGGAAACTGCGA 58 22381020 22381039 GTTCAACTTGGTCATTTGGC 58 NA Drosophila melanogaster 61 CG10535 FBgn0037926 FBtr0082420 1 1 1 84 3R 7480175 7480194 AAAGAGGTGGACCTACTGTC 58 7480241 7480327 GGAATGTCTTGCCAGTCCT 59 NA Drosophila melanogaster 61 CG8005 FBgn0035854 FBtr0076695 2 1 1 80 3L 8191567 8191645 GGGAAATTAACAGAATGCTGG 57 8191686 8191705 TGAAGTCGTCTGTTTCATGG 58 NA Drosophila melanogaster 61 Cda4 FBgn0052499 FBtr0077362 2 1 1 80 X 21990351 21990369 CACTAACTGGTTCCAGACC 57 21986113 21990307 TAGACGTCAGGTAGTTCGA 57 NA Drosophila melanogaster 61 HERC2 FBgn0031107 FBtr0301344 1 1 1 119 X 20282101 20282188 GAGTTCACGAATCAGGAGC 58 20282271 20282289 ATTCTTCTCGAGCACTTGC 58 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 1 2 2 115 X 17568968 17569359 TTACCTGATGACCAGGGAG 58 17568871 17568889 TACCAGTACCTCCAGTTGC 58 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 3 2 2 80 X 17497494 17497737 GAACAAAGAGGGTCTCTTGG 58 17497780 17497798 AGTTGAGTGGATCCAAGGT 58 NA Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 1 2 2 80 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492354 17492373 TCTGTATTGTCATCGCCTCC 59 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 3 2 2 80 X 15686611 15686630 GAGAAGTTCAGACTGCAAGC 59 15686672 15686755 CTTCGAAGATGCTTCTACCG 58 NA Drosophila melanogaster 61 CG6324 FBgn0030647 FBtr0074037 2 1 1 84 X 15374495 15374513 TCGGAGATGCAAGAGATGG 59 15374560 15374676 CCTCTCCAGACTGATTCTCG 59 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 3 2 3 113 X 14474871 14475007 GATCACCGATTCGACATGC 59 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA InUTR Drosophila melanogaster 61 Ste:CG33237 FBgn0053237 FBtr0300086 3 1 1 110 X 13953671 13953689 TCTGATACACAGCTGGACG 59 13953519 13953597 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 hep FBgn0010303 FBtr0073749,FBtr0073747 2 2 3 133 X 12974591 12974679 GCACCGAAGATACGTTTCG 59 12974476 12974494 TACGGTAGATGCGTCTCTG 58 NA Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 2 2 2 81 X 11805153 11805173 AGATCATCACGATAGTCTGCC 59 11805037 11805110 ATCGGGTTCAGGATTGGAG 59 NA Drosophila melanogaster 61 CG11756 FBgn0030290 FBtr0073450 1 1 1 60 X 11242685 11242703 GGTCCTTTGAATGCCAGTC 58 11242724 11242745 CATCGTCAGAGATGGAATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ykt6 FBgn0260858 FBtr0071093 3 1 1 114 X 7814728 7814746 TGAGCATCTTTCACAAGGG 57 7814823 7814931 GAAGCGAAAGTCATGAACTC 57 NA Drosophila melanogaster 61 CG15375 FBgn0029694 FBtr0070637 1 1 1 88 X 3995735 3995831 CTTCTTCATTTCGTCAAGGTC 57 3995881 3995899 ATGTAGTTCGAATCGAGCC 57 NA Drosophila melanogaster 61 CG34336 FBgn0085365 FBtr0112538 3 1 1 60 X 3763695 3763714 GAGCAGCTCTGAATTCAGTC 58 3763598 3763616 TCGATCATCCCTATCACGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG10801 FBgn0029660 FBtr0070526 3 1 1 117 X 3355972 3356090 TTACCGGAGATTTGCTCCT 58 3356171 3356189 CGAAGTCCCTTAACATGCG 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 2 3 3 115 X 938608 938686 GCAATCTGGATAAGGCTCC 58 938765 938783 AGCAGCATTCGAACTAGTC 57 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 2 4 4 104 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449555 3449573 CTTGATACTGATCTCCCGC 57 NA Drosophila melanogaster 61 CR40668 FBgn0085764 FBtr0114214 1 1 1 78 U 9469954 9469973 ACGAGCACATATTGTTTCCC 58 9470014 9470032 TAGATCCGTAACTTCGGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41423 FBgn0085644 FBtr0114088 3 1 1 108 U 2928106 2928509 AAAGGATCCTCACGATTGC 57 2928581 2928599 TGAGCGGGCATATTATCCT 58 NA Drosophila melanogaster 61 CG40245 FBgn0058245 FBtr0302520 3 1 1 61 U 688309 688330 ACTTGAGAAACTTTACTCGTCG 58 688269 688288 ATTCATCGATGCCAACATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 1 3 3 80 4 938362 938962 GCATACTGTTAAAGCCCAGTC 59 938302 938320 GTTTGCTGCTCACTTCCAC 59 NA Drosophila melanogaster 61 CR18228 FBgn0037560 FBtr0300631 2 1 1 113 3R 4087592 4087610 CAGAGTACTGGCCATTACG 57 4087296 4087320 CTCAGAATAGTGTATCTGCAAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 1 2 2 80 3R 27386439 27386457 GGATTCGGTTTACCAGGAC 57 27386500 27386585 TAAGAGTGGCATCTGTAGGG 58 NA Drosophila melanogaster 61 Bub3 FBgn0025457 FBtr0085465 3 1 1 110 3R 25500919 25500937 TCTTCTTGGGACGGAACAC 59 25500774 25500846 GTGCACTATGTCCATGAAGG 58 NA Drosophila melanogaster 61 CG14507 FBgn0039655 FBtr0113305 1 1 1 80 3R 25052655 25052962 GGAGCAGGATCATAGGGAC 59 25052593 25052612 TGGAACTCCAGACGAATCTC 59 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 3 2 2 82 3R 24671711 24678607 AATACGGAGTTGCCATCCA 59 24678653 24678671 CACAATGTCCACGGAATCG 59 NA Drosophila melanogaster 61 Cpr97Ea FBgn0039480 FBtr0085136 1 1 1 80 3R 22909738 22909758 TGGATGAAACTCTCAAGGAGG 59 22909615 22909699 GTTGAACACGATAGGGTTTCTG 59 NA Drosophila melanogaster 61 Gr97a FBgn0041224 FBtr0085081 1 1 1 85 3R 22791094 22791169 TAACCAAACCCTCACCAGG 59 22791027 22791045 TCACCACTTGCTTGAAACG 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 1 3 3 95 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 Tsp96F FBgn0027865 FBtr0084912 1 1 1 80 3R 21702439 21706747 TTTATTCTGGCTCATCGGAC 57 21702378 21702398 GTCATCGACAGCATAAATGTG 57 NA Drosophila melanogaster 61 CG4960 FBgn0039371 FBtr0084919 3 1 1 60 3R 21612498 21612520 ATGGTTCTACCCTTATCTACCAC 59 21612460 21612478 GGATCGTGAAGCTTCAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10425 FBgn0039304 FBtr0084867 1 1 1 100 3R 21087198 21087280 TTAAGGATGCCCTGAAGGG 59 21087116 21087134 GAAGAAGCCATCCCAAGGA 59 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 3 2 2 90 3R 19770504 19770746 ACACCCAAATTACTAAACGGC 59 19770434 19770455 GCAGCTTATTGTTGTATCTGCA 59 NA Drosophila melanogaster 61 CG10170 FBgn0039085 FBtr0084420 1 1 1 89 3R 19360244 19360262 ATCACACCAGTTGGAATGC 58 19360114 19360191 CTCGATCATTTCCTGGACG 58 NA Drosophila melanogaster 61 CG13841 FBgn0040588 FBtr0084316 2 1 1 80 3R 18593147 18593234 GAATTTCACATCAGGGAAGCC 59 18593087 18593105 TTCCTCGTCAGATTCCTCG 58 NA Drosophila melanogaster 61 BG4 FBgn0038928 FBtr0084176 2 1 1 60 3R 17860639 17860657 CAGAATGCTCAGCCATCAG 58 17860681 17860699 TTTGGATTGCTGTTGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5555 FBgn0038686 FBtr0083746 1 1 1 80 3R 15005244 15005265 TGCAGAGATTAAACACATCCAG 58 15005118 15005203 TCATTCGAGCGGAATTCCA 59 NA Drosophila melanogaster 61 CG7587 FBgn0038523 FBtr0083460 3 1 1 198 3R 13420425 13420443 TCTAATTCCGGTCACCGAG 58 13420603 13420680 GCTGATATAGGGTTTGTTGCA 58 NA Drosophila melanogaster 61 CG5866 FBgn0038508 FBtr0083440 3 1 1 60 3R 13241753 13241773 CATCATCAGTTGTCTGAATCG 57 13241795 13241813 CATGATAGTGGTGCTGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31265 FBgn0051265 FBtr0083402 2 1 1 60 3R 12954273 12954291 GATCTACTACACCGCCGAG 59 12954313 12954333 GTTATGCATGTAAGGCTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0301716 1 1 2 93 3R 11789256 11789332 CACTATCAATCGCCATGGAC 58 11789182 11789200 TTGGTTAGTGCTTGCATGG 58 NA InUTR Drosophila melanogaster 61 CG5399 FBgn0038353 FBtr0083164 2 1 1 69 3R 11521894 11521985 GTCACTCAGTTGGATTGCC 58 11522018 11522036 GGAAGCCAGATATCAGGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG4203 FBgn0038300 FBtr0083048 3 1 1 77 3R 11036383 11036401 CTTCTACTACGTCCAGGGA 57 11036500 11036518 AGAGTTTCACGCAGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0302146,FBtr0083033,FBtr0302142,FBtr0083030,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 10 10 88 3R 11004006 11004024 CGATCATCACTACAGCCGA 59 11001999 11002088 CATAGCGAGATGGGTACCTG 59 NA Drosophila melanogaster 61 CG9288 FBgn0260464 FBtr0082829 2 1 1 60 3R 9605881 9605905 ACCAGATATTACTACTTCAAGGGAG 59 9605923 9605941 TGCGATTGGAGTGGTAGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10909 FBgn0038090 FBtr0082685 3 1 1 60 3R 8736106 8736128 GATGCTAAATGCTAGACACTTCC 59 8736068 8736087 CGAATGTAAATAGGCCACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100524 2 1 2 262 3R 8221541 8221629 ATTACTCGGCAAAGTGGTC 57 8221297 8221315 AACTTCAAACACCTGCAGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14739 FBgn0037987 FBtr0082553 3 1 1 203 3R 7874913 7874931 GTTAGAGTAGGCGGTAGGT 57 7874669 7874687 GTGTTCACCAGCAATTGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14722 FBgn0037943 FBtr0082431 2 1 1 73 3R 7567862 7567883 GGACTTGCAATATTATGCACAC 58 7567990 7568010 GTCCAGATCATCTAGTTCGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Art1 FBgn0037834 FBtr0082304 2 1 1 80 3R 6613242 6613262 GATTGAGGAGATTGAGCTTCC 58 6613095 6613200 TAGAACAGGCAGTAACCCA 57 NA Drosophila melanogaster 61 CG8273 FBgn0037716 FBtr0082072 1 1 1 109 3R 5405793 5405811 GTCTTAGTGCCATTCGACG 58 5405943 5405961 CAGATGCTTTGAGTTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31462 FBgn0051462 FBtr0081851 2 1 1 60 3R 4213518 4213539 TTAGCCTTAAGACTAGATCCGT 58 4213479 4213498 CTGTCTCCCATCTGATTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10919 FBgn0037514 FBtr0081739 2 1 1 82 3R 3584232 3584250 ACCGTATTCGATGACGACC 59 3584294 3584366 TCCAGACAACGTATCTGAAGG 59 NA Drosophila melanogaster 61 CG31482 FBgn0051482 FBtr0081679 1 1 1 85 3R 2427063 2427142 CTCTATGTTTGTTGGTGTTGGT 59 2427188 2427206 ACTTCCATGCTTCTCCCTC 59 NA Drosophila melanogaster 61 katanin-60 FBgn0040208 FBtr0078827 1 1 1 80 3R 1056339 1056724 GTGGAGCATGATCAACCAG 58 1056277 1056295 AGCGAGATGTCTTGTAGGG 58 NA Drosophila melanogaster 61 CG11137 FBgn0037199 FBtr0078577 2 1 1 88 3L 22861067 22861085 GAACCAGAGTGAAGTGGTG 58 22860945 22861018 TCATGGGAATGTTCTTAAGAGG 58 NA Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 1 1 1 96 3L 21628661 21628735 AGCCCACCTGTACTTTCTG 59 21628795 21628813 ATCGATCTGTTCCCAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5656 FBgn0037083 FBtr0078396 2 1 1 86 3L 21436825 21436948 TGTCCAAGACTTATTGCGTC 58 21436758 21436776 GATAGTTCGCCTTGATCCC 57 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078348 2 1 3 138 3L 21426793 21428134 AATGGAAAGGCACTAGCAG 57 21428236 21428254 AATAGTGGAGGGAGACTGC 58 NA InUTR Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 3 2 2 96 3L 20478512 20478598 TATCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 CG14187 FBgn0036938 FBtr0074868 3 1 1 113 3L 20105761 20105871 TTCTTGTTGGTTTCACAGCT 58 20105667 20105685 ATAATCCACAGGTCGTCCA 58 NA Drosophila melanogaster 61 CG14088 FBgn0036858 FBtr0075016 2 1 1 60 3L 19263305 19263323 TATGGACTCACGGATGCAG 59 19263263 19263287 CCATGTAGTTCCATTGAAATAGTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32204 FBgn0052204 FBtr0113429 1 1 1 80 3L 18923742 18923761 CGTACTGATATACTCGTGGC 57 18923241 18923700 ATTTGCACACCGTAGTAGAC 58 NA Drosophila melanogaster 61 CG16775 FBgn0036767 FBtr0290228 3 1 1 60 3L 17879376 17879394 AAAGAACGCCGTATCTGTG 58 17879334 17879353 GACACGACAGATGAAGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 2 1 1 77 3L 17799121 17799139 GGAACTCAACCTACTGCAC 58 17798938 17799081 TTCAGGAATGTTAGCTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32176 FBgn0052176 FBtr0075218 1 1 1 94 3L 17427531 17427549 CATCGGAGGTCAGGAATCC 59 17429474 17429627 TCATTTGACCACCCGACTC 59 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075500 1 1 3 104 3L 16033154 16039592 CCGTCAAGTTTCGACTTCAG 59 16033069 16033087 TCAGCTACAACAGATGCCA 59 NA InUTR Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 2 2 2 103 3L 14532076 14532094 TCTACAAGGGTCTGGTTCC 58 14532159 14532662 CACCACATACTTGTAGAGCAG 58 NA Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075755 3 1 2 60 3L 13875273 13875745 CTAACTCAAATAAGAAGCGACCG 59 13875762 13875783 TGTTTGATCTCCGTCAAATAGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33263 FBgn0053263 FBtr0075859 2 1 1 60 3L 13416904 13416922 CTGATTACGCCTCTACAGG 57 13416862 13416882 GTTGTTGTAGAATCAGCTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 2 2 2 96 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002072 13002092 GGTTTCGCTAAATCCAGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10627 FBgn0036298 FBtr0075967 2 1 1 102 3L 12520976 12520994 GTGGTGGCGAAATACAAGC 59 12520823 12520911 TATCGGTGTCCTCTTTGGTG 59 NA Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 3 1 1 65 3L 12183342 12183411 TTTGGAACTGTACACGGTG 58 12183439 12183458 CATTTCCACATCTCGTACGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG34241 FBgn0250825 FBtr0112435 3 1 1 218 3L 12121216 12121290 TTCAAATCAGCCCATCCTG 57 12121467 12121490 CCATTGCGTAGATAAACACTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 Ir68b FBgn0036250 FBtr0076026 1 1 1 60 3L 12120284 12120303 TAGACTGCCCGTAATCACAC 59 12120243 12120263 CGTTCGTCTAAATGGTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300726,FBtr0300097 2 3 3 91 3L 11683405 11684009 GCTGAATGATATGATGAGCGA 58 11683334 11683352 CTTTGGTGCGCTGATAGAC 59 NA Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 2 2 2 106 3L 10635606 10635624 CATCTGCTCAAGTGCTGTG 59 10635692 10635814 CGCGTTAAGAACATCATCTCC 59 NA Drosophila melanogaster 61 Ilp1 FBgn0044051 FBtr0076328 2 1 1 73 3L 9791663 9791681 GGAAACCACAAACTCTGCG 59 9791718 9791736 AGCGTATTAAAGCCATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33696 FBgn0053696 FBtr0091684 3 1 1 95 3L 9638577 9643454 GGAATACAAAGAACAACTGGC 57 9643511 9643529 GTACAGGTGTTCAGAACGG 58 NA Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 1 1 1 64 3L 9420423 9420503 CGAGAGTGCATCAATCGAG 58 9420531 9420549 GTTAATCTCCGCTTGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32364 FBgn0052364 FBtr0076720 3 1 1 116 3L 8203498 8203519 GGTGAAGTTTACATTATGCGCT 59 8203348 8203423 CATTGGCAGATATTGCATTGC 59 NA Drosophila melanogaster 61 CG13675 FBgn0035845 FBtr0300119 3 1 1 115 3L 8154635 8157327 TCAATGGGCAAATCGATGG 58 8154538 8154556 TGTGTCCGCATAGTAACCC 59 NA DesignRelaxed Drosophila melanogaster 61 Cdc27 FBgn0012058 FBtr0076890 3 1 1 61 3L 7241635 7241654 ACTACGACTTCAAGGATGCC 59 7241524 7241611 GTCGCTCTCCACTTCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 3 7 10 107 3L 5534353 5534442 GCTATAACGGTATTAACGATGGTC 59 5534269 5534288 CAACAACGTGGACATATGGG 59 NA Drosophila melanogaster 61 CG13717 FBgn0035562 FBtr0073320 2 1 1 61 3L 4629880 4629901 CGAATCCAATTAGTTACTTGGG 57 4629840 4629858 GATGCTGGTGCGATTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12035 FBgn0035263 FBtr0072766 1 1 1 60 3L 1725317 1725337 AACGACACCTTTCTCTTTCTC 58 1725359 1725377 GGCTGAGAAGGAATAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 3 3 3 81 3L 1573237 1573258 TACCAGAACTTCTTCATCTGCA 59 1573300 1573555 GTGCGTAGACCTGATAGGG 59 NA Drosophila melanogaster 61 CG9129 FBgn0035196 FBtr0072653 3 1 1 60 3L 1250895 1250915 GAGAAACGCTCTAATCTTGCT 59 1250937 1250955 GATCGTCCACCATGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33405 FBgn0053405 FBtr0086397 1 1 1 60 2R 15634542 15634560 ATACATCGGTTCTCGTCCG 59 15634500 15634518 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33420 FBgn0053420 FBtr0086412 1 1 1 60 2R 15629005 15629023 ATACATCGGTTCTCGTCCG 59 15628963 15628981 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30068 FBgn0047303 FBtr0087541 3 1 1 132 2R 10164024 10164796 ATTACCAGAACGACTGGCA 59 10164892 10164910 GTGTTTGCTTTCGTGTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 2 3 3 81 2R 20308344 20308878 CTTATGAGCGGAACTATACATTGG 59 20308286 20308304 GTAGAGGTCAGTTGCTGGG 59 NA Drosophila melanogaster 61 CG13575 FBgn0034996 FBtr0072264 1 1 1 153 2R 20143122 20143140 ACCCTCTATGTGAACAGCC 59 20143257 20143330 CACCAATTGTCCAGAGCTG 58 NA Drosophila melanogaster 61 Adk2 FBgn0022708 FBtr0072163 1 1 1 80 2R 19912877 19912959 CAATGACGGACGATGTCAC 59 19913003 19913021 CTTCCAGTCGCTTCTTCAG 58 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153 1 1 3 80 2R 19858141 19858159 AGCTGGCAGTAAAGTACCT 58 19858203 19858291 GGTTTCATGGGTTGTTTGG 57 NA InUTR Drosophila melanogaster 61 CG30278 FBgn0050278 FBtr0071780 3 1 1 80 2R 18105488 18105558 GCATCTGAATGAGTGGACC 58 18105426 18105447 ACTATGGTGTTATTGTCCAGGA 59 NA Drosophila melanogaster 61 comr FBgn0034667 FBtr0071735 2 1 1 60 2R 17752673 17752694 CATAGAAGAAACGACCGAAACC 59 17752634 17752653 GTCATCATCCAGGTCATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hbn FBgn0008636 FBtr0071556 3 1 1 80 2R 16845886 16846054 AAAGTTCGAAGATCTCGCAC 58 16845825 16845843 GGGATACTGGGTCTTCTCG 59 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 2 2 2 102 2R 13477485 13477505 GTAATAGTCCCACAGAGACAC 57 13477350 13477421 TGGGTGAGATTCTTCTCCA 57 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982,FBtr0086981 3 2 2 80 2R 13000902 13000985 GGTTGCAGACATATCAAACCC 59 13001027 13001045 TGGTCAGTCTTTGGATGGG 59 NA Drosophila melanogaster 61 CG6435 FBgn0034165 FBtr0087045 1 1 1 92 2R 12761376 12761749 GTTCCAGCTATGAGGTGCA 59 12761805 12761823 AAATTGCGGATGCATTGCA 59 NA Drosophila melanogaster 61 Ef1beta FBgn0028737 FBtr0087041 2 1 1 81 2R 12755888 12756006 CATCAGCGGATATACTCCCA 58 12756050 12756068 GTTCACATTGTCGGCAGAG 59 NA Drosophila melanogaster 61 CG34459 FBgn0085488 FBtr0112765 2 1 1 110 2R 12713108 12713127 CGAATACGTGGAGTATTGGC 58 12713257 12713276 GATCATTCTCTTGTGCTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Cng FBgn0014462 FBtr0087187 1 1 1 89 2R 12135409 12135744 GTCGCATTACAGATGGCTG 59 12135338 12135356 TTGATCTCCCAGAAGACCG 58 NA Drosophila melanogaster 61 Vha14 FBgn0010426 FBtr0087341 2 1 1 62 2R 11567316 11567334 CTGGAGGACTGTTTCAAGC 58 11567272 11567293 CTGGTTGATTAGAATGATGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087565 3 1 2 164 2R 10157671 10158057 GCACAAGCAAACCTATAAAGC 58 10157527 10157546 CTTTAGATCTGCGAAGCGTG 59 NA InUTR Drosophila melanogaster 61 fas FBgn0000633 FBtr0087625 1 1 1 84 2R 9606713 9613061 TGTGCGATTTGATTCGGTG 59 9613109 9613127 CTTGTTGGGATTGTGCGAG 59 NA Drosophila melanogaster 61 mRpL18 FBgn0026741 FBtr0087852 1 1 1 60 2R 8644507 8644525 TGTCCTTCAAGGAACCCTC 59 8644549 8644567 TCATGCCTCTTCTCATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 3 2 2 92 2R 8321900 8321984 TTCACAAGATCTTGCCAAGG 58 8321827 8321845 ATTTCTTGGTTTCCAGGCC 58 NA Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082 3 1 2 144 2R 7578239 7578325 CAGCGAAGCTCCAATAACC 59 7578022 7578040 TCAGGGTGATCGGATTGAG 58 NA InUTR Drosophila melanogaster 61 Cpr47Ee FBgn0033602 FBtr0088114 2 1 1 125 2R 7153159 7153177 ACTCAATCTGGATGGAAGC 57 7153266 7153629 GATCCCTGAATCACCTGTG 57 NA Drosophila melanogaster 61 CG13228 FBgn0033588 FBtr0088106 3 1 1 63 2R 7121719 7121737 AAACAGTTCCCGTTGTGTC 58 7121764 7121782 GGTATCGTCTGTATGACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 2 1 1 96 2R 6199254 6199418 AATGCATGATTTCTGCTGC 57 6199176 6199194 TTCATCCGTCTCGTATGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 2 1 1 60 2R 3828675 3828693 CTATACGCATGGGATTCGT 57 3828717 3828786 GTGAACAGTAATTGGGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 2 2 3 96 2L 20648001 20648197 GGTTTCCACACTTATAATGCAG 57 20648425 20648443 GAGAAATTCGGGTTTCAGC 57 NA Drosophila melanogaster 61 His2B:CG33886 FBgn0053886 FBtr0091890 1 1 1 60 2L 21493180 21493199 AGAAGAACATCACCAAGACC 57 21493139 21493157 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0110945 3 1 2 208 2L 21166944 21167020 GGAGTAGATATACAAATGCGACG 59 21166422 21166445 GGAATTTCGTAGTACTTATTCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0110945,FBtr0081498 1 2 2 61 2L 21166945 21167023 GAAGGAGTAGATATACAAATGCGAC 59 21166908 21166928 ATCCTCTCCAGTTCATTTGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290305 2 1 2 64 2L 21051802 21051820 ATACGCGACCAATTGACGA 59 20967729 21051776 CTAATTATGGACGATGCTCGT 58 NA DesignRelaxed Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389,FBtr0081390 2 2 2 84 2L 20678068 20678086 AAAGCGACTTTGATGGAGC 58 20678131 20678212 GTCCATTGATCGTTAAGTTCGT 59 NA Drosophila melanogaster 61 CG2608 FBgn0032870 FBtr0081384 1 1 1 140 2L 20645900 20645918 AAACAAGCTGATCAACCGC 59 20646105 20646123 GCGTTGAGTATTGAGTCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081370 2 1 2 96 2L 20387588 20399219 TTGTGAATGGAAAGGGCAG 58 20387510 20387529 TCTGTACTAAAGCTGCTGAC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300003 2 1 4 97 2L 16559933 16652749 AAGTTTATCGAGGTCCCGC 59 16652810 16652828 GTTCTCGTTGACGTACTGC 59 NA Nonspecific Drosophila melanogaster 61 CG7631 FBgn0028945 FBtr0080754 3 1 1 80 2L 15628884 15628968 GATATCTGAGGAGTTTGATGCTC 59 15629005 15629026 CGAATACAAGACGAATACTCGA 58 NA Drosophila melanogaster 61 CG9254 FBgn0028513 FBtr0080512 2 1 1 60 2L 13596868 13596886 TACACCATGCGGATATGTC 57 13596826 13596847 TATAATTCCTCTTCACCACCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Drep-4 FBgn0028406 FBtr0080478 2 1 1 107 2L 13285775 13285793 CTTCTGATGGCTTCGAGGT 59 13285632 13285707 AATCGGCATCTGTTGTAATGAC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299782,FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 6 6 92 2L 11818480 11818604 TCAAGAACCTGGACGACTG 59 11818406 11818424 TGAAGAGCTCATAGGCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091683 1 1 5 208 2L 11278251 11278269 TTTGTCTCACTCCTGCGAG 59 11278601 11278619 ATTATGGACGAGTGCAGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Art8 FBgn0032329 FBtr0080162 2 1 1 102 2L 11010889 11010963 AAACTTGGAGATCCACGAG 57 11010805 11010825 TACGATCTTGTCCTTGAACAG 57 NA Drosophila melanogaster 61 lectin-33A FBgn0040096 FBtr0113317 2 1 1 116 2L 11002194 11002267 GTATCTTTGCAGGAGGCCA 59 11002345 11002365 CTTTAGGAACGTGGTTGTGAG 59 NA Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 3 3 3 118 2L 8674261 8674279 CCTCTAGGCTTCCTACCCA 59 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 CG14538 FBgn0031943 FBtr0079484 2 1 1 60 2L 7756727 7756745 GAGTGCTCCCATCATTGTC 58 7756769 7756787 ATCACTGCTCTGGAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 2 5 5 132 2L 6924279 6924299 TGGTTATCATGTACGACCAGG 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Vm26Aa FBgn0003979 FBtr0079239 1 1 1 88 2L 5960079 5960097 CTCCGTAAGTCTGCCTACG 59 5960009 5960028 CTGAACAGGTAGTTCTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111,FBtr0079110 3 2 3 61 2L 5668877 5668957 TATCAGTCAACATGATGCGC 59 5668981 5668999 GATCTTTGCAGTACGCTGC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15434 FBgn0040705 FBtr0077440 3 1 1 98 2L 4454737 4454755 TACTCTGTTCCGATTGGCC 59 4454817 4454896 ACGTATTCCCTGACTCCCT 59 NA Nonspecific Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 2 2 2 94 2L 3807048 3807142 TGGAAACTAGTGTTGCTGG 57 3807200 3807218 CTGGTCGTACATGAGATGG 57 NA Drosophila melanogaster 61 Thor FBgn0261560 FBtr0077524 1 1 1 88 2L 3478684 3478702 CATCTCGGATCCGATCCAG 59 3478754 3479196 TAAGTTTGGTGCCTCCAGG 59 NA Drosophila melanogaster 61 Cwc25 FBgn0031452 FBtr0077712 1 1 1 163 2L 2745203 2745277 GTGGCGGAGATCTAAATCTG 58 2745402 2745421 CAATCGCCTTAGTTCCTCTC 58 NA Drosophila melanogaster 61 CG34314 FBgn0085343 FBtr0112512 2 1 1 60 2L 2574466 2574484 GCGGCTCCATCAATTTCTG 59 2574424 2574445 TTTCTTAAGGATCTTCTCGGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3609 FBgn0031418 FBtr0077791 1 1 1 110 2L 2372913 2372931 ACCTTGACCTACAGTGGTG 59 2372762 2372841 GTCAATCAGGGTAACTTGTCC 58 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 1 2 2 87 2L 952065 952083 AAGGAGACGGCTATTACGG 59 952134 952265 GTAGACGTTGCTTGTCCAC 58 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 1 3 3 83 2L 862618 862636 TTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 2 2 2 82 2L 592324 592342 CACACTACCCAGATGTGGT 59 584434 592279 CTTGAACCACACCTCAACTC 58 NA Drosophila melanogaster 61 CG2813 FBgn0031268 FBtr0078069 3 1 1 80 2L 575074 575148 GCAACTACTTTGTCATTAGTGG 57 575189 575207 GTCCTAATAGTGCGGTGAG 57 NA Drosophila melanogaster 61 Nle FBgn0021874 FBtr0078075 3 1 1 107 2L 567019 567096 TTTGAGCACTGAGGAATTGC 59 566931 566951 AGATAGAGGGTGTTGTCATCC 59 NA Drosophila melanogaster 61 RpLP1 FBgn0002593 FBtr0078056 2 1 1 110 2L 420049 420067 TCAGTGATTAGCCACAGCA 59 420141 420304 TGATCTTCTCACCGGTGAC 59 NA InUTR Drosophila melanogaster 61 dbr FBgn0067779 FBtr0078100 3 1 1 99 2L 67933 67952 TTGTTACCGCCAAGTAGAGG 59 68009 68093 ATTCTTAGGCAGTGTACTAAGGAG 59 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415 3 1 4 92 2L 38076 38542 GCCTATAGTTCTCAAGAACGC 59 38004 38022 CTCGCTCTTTAGCTGACGT 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 2 3 8 103 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119986 120006 CTGATTTGGGAGGTTGTACTG 58 NA InUTR Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 2 2 5 184 2L 835541 835715 TCTTTACGTGGAGTGCTCC 59 835375 835393 CTGAACATTGCCACTGGTG 59 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 1 3 3 84 2L 1985976 1985994 CTATCGCGATGACAACACC 58 1985848 1985866 CTTGTCCAGACTACGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 2 2 2 80 2L 2134954 2135044 CAACCTCAAGTTCTTCAACGA 58 2135085 2135104 AGGACACGTGAGATGTTCTC 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 2 4 4 80 2L 2495480 2495582 TTCGCAATGAGGTTCAAATCC 59 2495624 2495642 AGCACATGACCTGGTACTG 59 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 1 3 3 107 2L 2866731 2866821 TGGAAGACCAAGGTTCCAG 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 2 1 1 71 2L 2869357 2869375 CGAACACAGGCATCAATGG 59 2869236 2869254 CAGCAGCATTCACAAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 1 7 7 80 2L 2963125 2963239 CTGTTAAGGTGATTCGTGATCTG 59 2963278 2963297 CAGCCTCTTCGTAATTCGTC 58 NA Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 1 2 2 80 2L 3463758 3463777 GCCGCTAAATAATTTGCAGC 58 3463645 3463717 ATATTGAAGCCCTGGTACTCG 59 NA Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 3 2 2 94 2L 3807048 3807142 TGGAAACTAGTGTTGCTGG 57 3807200 3807218 CTGGTCGTACATGAGATGG 57 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 2 8 9 85 2L 3879058 3884044 AGTTCGAAGGTCAAATGCT 57 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 CG15440 FBgn0031607 FBtr0077454 3 1 1 149 2L 4454330 4454348 TTGTCAACTGTGGATGGGA 58 4454138 4454156 AAGTTGACGAAGCAGTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 4 5 112 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473872 4473890 CCTGTGGTTGCATGTAGAG 58 NA Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 3 2 2 153 2L 4837524 4837611 GGCGATAAAGAACATCACCC 59 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 3 6 6 104 2L 4909615 4909687 CATTCTATGGGTTTCCGCT 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 1 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 3 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 3 2 5 100 2L 5277169 5277941 TTTCATTGAGCGTTCACTGG 59 5277088 5277106 CGAGTTTGGGTGAAACCTC 58 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 3 4 4 95 2L 5976673 5976693 GTACATTTACCTTTCCGGCAC 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 1 3 3 101 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 1 3 6 120 2L 6691067 6691085 CACGATACCGTGAATGGAG 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 2 3 6 121 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 1 2 3 104 2L 7041152 7051378 CTATTTCCTTCTATGCGGCA 57 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299537 2 1 3 141 2L 7234990 7237697 TGATTTCGAGGTGACTCCG 59 7234867 7234885 CTCCTTCCACTCGATCTCG 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 1 4 4 80 2L 7729222 7729243 GATGAGTTGCAACAATAGTTGG 58 7729109 7729185 GGATCAACTCTATAGTCATCGAC 58 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 3 4 4 81 2L 7727745 7727837 CTGTGTCTGTTTCAACTAACCT 58 7727685 7727703 GAATCAAGCCCTGACTCAC 58 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079536 2 1 4 121 2L 8031301 8032073 TGTGAAAGGATATAGCGTAGGA 58 8032155 8032173 CTCTCCTGATCCTCTCCTG 58 NA InUTR Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079539 2 1 4 135 2L 8031452 8031471 CAGCTGGACACTTAGAAGAG 57 8031569 8032071 CTACGCTATATCCCAGCTG 57 NA InUTR Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079687 1 2 4 91 2L 8537386 8537404 GAATCCATTCGCCGAATCG 59 8537459 8540471 ATCAGTGGCATCTCCTTCC 59 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 1 3 3 80 2L 9338507 9338591 CAAGATTGCTACCAGAGCC 58 9338634 9338653 GTGGTCACCAGACATATTCC 58 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 2 3 3 80 2L 9338454 9338473 TTGGTCTCATCAATCACCAG 57 9338514 9338600 GTAAGTAATGGCTCTGGTAGC 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079912,FBtr0079914,FBtr0079915 1 4 6 96 2L 9802415 9806444 GGAGTTACAATTCTTCTATCGCTC 59 9798297 9802360 AGTAGGTGCCTAACAAGGG 58 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 1 3 4 90 2L 10248580 10248600 CGACAGAATGTCCTATTTGCT 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 2 4 4 80 2L 10414647 10414788 GTTGCTGTCAGAATCCGAC 58 10414832 10414850 CTCTCCAAGAGTGACGGTC 59 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 1 1 1 149 2L 10426576 10426597 CACTCGATTTATTCTTCATGCC 58 10426079 10426097 CCCGATAATTCAGGTGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031 1 1 2 96 2L 10459266 10459665 AATGTTAAAGAGCGCGTGG 59 10459725 10459743 AATCCTCACCCATGGTCAG 59 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 2 4 4 103 2L 11258904 11258989 GAGAATACATTCGGCATGGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 CG34164 FBgn0085193 FBtr0112355 3 1 1 74 2L 12057123 12057141 AAATGAGTTTCTGTGCGCC 59 12057246 12057264 TTGTACGAGACGGATACCT 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 3 2 17 94 2L 12736803 12737966 AAGTATTCCGGGTTCTGGC 59 12738023 12738042 GAAGTAGTACAGGAAGGCGA 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 3 3 17 90 2L 12731059 12737970 TCTTTATGGTTCTGGCTACC 57 12738023 12738041 AAGTAGTACAGGAAGGCGA 57 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981 3 2 3 115 2L 13173937 13174452 GAAAGATGGCATGGCTGTC 59 13173840 13173859 ACGAATATAGTTCGCCTCGG 59 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080441 1 1 4 117 2L 13208767 13209480 CGAGAAAGAAGGTTCTTCGA 57 13209558 13209578 TGACTTTCCATCACTGAACTG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0113040 3 1 9 196 2L 13275049 13275593 AGAATCGTCTCAGCGATCC 59 13275753 13275771 ACTATTCCTTGCCTGCTGG 59 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 2 2 2 71 2L 13668754 13668772 CATATTCCGTCCGGAACTG 58 13668864 13668883 ACATAGTCCTCCACAGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 3 2 2 87 2L 13794621 13794909 CATATCAGCTGCCTACAATGAG 59 13794957 13794975 CGAGGAGTAGTCGTTTCCA 58 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302731 1 1 5 84 2L 14287775 14287793 ACGGACACTCAAACTCCTG 59 14287841 14288161 CAACGCTCACAACGATCTC 59 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 1 2 3 80 2L 14391996 14392246 ATCCTATTATCCACCCGTTGG 59 14391936 14391955 TAACCTGCAACGGAATTGTG 59 NA Drosophila melanogaster 61 CG42586 FBgn0260954 FBtr0301740,FBtr0301741 2 2 2 60 2L 14741600 14741619 GTGGATTTGGTGATCAGCAG 59 14741559 14741577 AATCCACCTCCGAATCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 3 4 4 83 2L 15065452 15066951 GTTCCGATAGAACTGGTGTG 58 15065388 15065406 CAATAGCCTCCTTGACCGA 59 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 2 2 3 112 2L 15714208 15714226 ACATTGGAGCTGCTTTGTG 59 15708026 15714132 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 3 4 5 161 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737811 15737831 ATCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 1 4 5 80 2L 15760339 15760416 CGATCCGGATTACAGAACC 57 15760277 15760295 GGATAGTTGGCTCCATAGC 57 NA Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 1 2 2 80 2L 15906995 15908081 GAAATCGATGTCGAGACTGC 59 15906934 15906955 AAATTTGCCCGATATTGAGGTG 59 NA Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 2 2 2 80 2L 15906995 15908080 AAATCGATGTCGAGACTGC 58 15906933 15906953 CAAATTTGCCCGATATTGAGG 58 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 2 3 3 84 2L 16045891 16045909 GGGATCCGAGAAGGAATCG 59 16045955 16046035 GATTTGGCTCGCAATACTCTC 59 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 3 2 3 97 2L 16044331 16044351 GATCGACAGAAATTGGAACAG 57 16044470 16044804 TCCGTAGTGTTCATGATGTC 57 NA Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 1 3 3 80 2L 16665211 16665231 GAGCAAGAATATTTGTCCGGT 58 16665100 16665173 CGCTTAAGGGTCTTATCATTCAG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080906 2 2 16 90 2L 16774849 16775220 ATCTTCGAGTACAACGGCT 58 16775272 16775292 CCATGACGAACATGATATGGT 58 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012 3 1 2 98 2L 17810926 17812077 GCGAGAATCGACGAATATTCG 59 17810848 17810867 GGACTTGCCACGTAAATGAC 59 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 3 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128062 18128145 CTTATCCTTGTGCATCTGGT 57 NA Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 1 1 1 188 2L 18615745 18615763 CAGTGTTCAAATGGAGCCC 59 18615450 18615470 TCATCGTGATCAATGATGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 2 4 4 104 2L 18827250 18827520 TAGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 3 2 3 96 2L 18965178 18965271 TGATGAATGCGAGATTGCA 57 18965100 18965120 TGACAATAGTGCAATCGAGAG 58 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107 1 3 6 92 2L 19510636 19510654 CTATCCGGGAACCACTCTG 59 19510129 19510581 GTGTAGTTCTTGTGCGTGTG 59 NA Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 1 2 2 80 2L 19729960 19729979 GTACTGGACGTCTTCCAGAC 59 19730020 19730108 GAAGTGGTATTGATCCTCGGT 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301718 2 1 4 87 2L 19929345 19950418 GTCAACCAATGTAAGTTCACAC 58 19950466 19950484 CATTTGGCTAATGGTGGCA 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 1 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 3 5 5 86 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666299 21666317 ATGCGAAGCATTTCGTTGG 59 NA Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 1 2 2 132 2L 22240053 22240072 TTATAGTCGTTGCCTCTGGA 58 22240217 22240235 AGTGGAATAGTAGGCCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 3 4 6 103 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737574 22741714 AAAGCCAGTTGACTCTCGT 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 2 4 6 104 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737575 22741715 GAAAGCCAGTTGACTCTCG 58 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111268 2 1 2 87 2R 130194 130274 ATTGAGGAGAAATTCGAGCG 58 130126 130147 GTGACAACATATCATGCATCTC 57 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 3 5 5 74 2R 1491753 1491771 ATGATCAAGTTCGCTCCCT 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 3 3 3 162 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968906 1969244 TCCAAAGGCAATTCTCTGC 58 NA Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 1 1 1 83 2R 2090813 2090831 CTCTGCAAGCAAGTAAGCC 59 2091529 2091547 AGCTGTCTTGGAAGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 1 4 5 81 2R 2503184 2503202 GAGCTGGAAGCTATCTCCA 58 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 1 2 2 81 2R 2650391 2650411 GTGAACTTCGAGAAGATGCAC 59 2650271 2650348 GCTCTAGTCCCAGACTCCT 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 2 11 11 89 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764847 2764865 GAACATCCTTGACATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577 1 1 6 111 2R 2822790 2822935 TTTCGCAGTTTGTAACGCC 59 2822591 2822609 GTCTGGTTCGTTGCATTCG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 3 3 6 96 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814241 2814259 CTTCGCGTTGAGATTCTCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 1 3 59 81 2R 3241438 3249237 GATTGGTCATCACAGAGCC 58 3241375 3241394 ATGGACTCCACAATATTGGG 57 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 1 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0088996,FBtr0300481 3 3 8 95 2R 3355990 3356013 CCAACTCGAATAAGCTAGTTAAGG 59 3355323 3355936 GCACATCAACTCCACAGTG 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089743 3 1 3 176 2R 3390368 3390387 GAATCGTGACACAGTCTCCA 59 3390526 3390687 TCATTCCCTTGCTGTTTGC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0113382 2 1 6 92 2R 3520824 3520842 CAACTATGAGTACTGGGCG 57 3520898 3521729 GCTAGTTTGAGATGCTGCT 57 NA Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 1 2 2 83 2R 3695077 3695095 CAAATGCTACTCCTGCGAG 58 3695142 3695223 GACTTCCAGCACTGAATCG 58 NA Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832 1 1 2 190 2R 3694089 3694580 ACAATAATGCCAGAGCCGA 59 3695101 3695119 CTCATAGGGATCCCGACAG 58 NA Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 3 1 1 72 2R 3841408 3841428 CCAGCAGTTTAAAGAGTTCCA 58 3835975 3835994 CTTTGGGTCTATTTCGAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325,FBtr0273327 3 2 4 112 2R 4376854 4380734 TTATCAAAGGGTCCATCAGC 57 4376761 4376779 TATGGATGTGACCGAGGAG 58 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 1 2 3 136 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967842 4967860 ATCGAGATCCTCACCAGTC 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 3 4 12 80 2R 5003947 5004693 CAAGTACAAGGAATGTGAGCA 58 5004733 5004753 GAGATGTTCAGAAACGACAGG 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 2 2 2 80 2R 5051522 5051599 TCGATCTTACAGGATGATTGC 58 5051462 5051482 TATGCATAACCAGAACCAAGG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088605 1 1 10 189 2R 5143773 5143791 TGATTGTGCCAACCTTCCA 59 5143530 5143620 AGACTAATACGGGCAGCAG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0302602 1 3 10 116 2R 5146430 5146448 AAGGACAGGTGATCCAAGG 59 5143531 5146350 GACTAATACGGGCCTCCTG 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444 3 1 5 98 2R 5805514 5805532 ATCTTAGCGTACTGAGCCA 58 5804409 5805453 TAATGAAGTCTGGAGTGGGT 58 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 1 2 3 80 2R 5919133 5919153 CTTGTCTACTGCCTGTATGTG 58 5918913 5919091 ATTTAGCTGTCCTGCACCT 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993884 5993903 TGGCCCTTAACTTCTCAGTC 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0112799 3 1 4 105 2R 6097602 6124512 ACCATCAGAGCTCAAATTGAG 58 6097517 6097535 GAAAGAATCCCTTGCAGCC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 2 4 17 107 2R 6181258 6181375 CTGAGATCGGAGGTCAAGG 59 6181661 6181680 ACACTTGTAGCGAATCACGA 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 3 2 3 126 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322250 6322272 CTCTTCAGTCATTAGGTTCTCCT 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 3 2 3 126 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322250 6322272 CTCTTCAGTCATTAGGTTCTCCT 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 3 2 26 95 2R 6419606 6419624 CATATGCAACATGGCAGCA 59 6393564 6419549 GCGTAATACTCAGATCTTGGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569 2 1 3 156 2R 7115743 7115761 AAGACGATGCCTACTGGTG 59 7115329 7115623 TCAAAGTCGTCGTTCTGCT 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 1 2 5 169 2R 7198801 7198820 ATAAATCCGATGCGTAGCAC 58 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 1 2 2 83 2R 8575267 8575285 GTAGCTTTACAGAGGGCAG 57 8575390 8575408 AGTAGCGAAATCCCAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 3 3 3 103 2R 8822745 8822765 ACAATAGACAGTATCCGGGTG 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 1 2 2 93 2R 8825966 8826076 GGATCGGTTTCACAAAGCC 59 8826132 8826151 CATGGAATCACTGTCCTTGG 58 NA Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 1 2 2 80 2R 9037179 9037266 AGTTCGCAGAATTACAATCACG 59 9037120 9037141 GAGAGGTGTTTGTTCAATGTCC 59 NA Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 1 1 1 70 2R 9280195 9280214 CTATTTATCGGAGGTTCGGG 57 9280058 9280076 GTTTCTTCCTCTCATGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705 3 1 6 81 2R 9331010 9331029 TAGCCCTCAAGATCATCCTC 58 9330623 9330966 TCTCGATTGGCCCTAAGAG 58 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0087669 2 1 2 103 2R 9394290 9397306 GAAATTTGGATTCCCTAGACGA 58 9397370 9397388 TTCGATTTCCATGTGCTGG 58 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087593 2 1 3 151 2R 9848758 9849731 GAGGGCACAATTGATTCCAG 59 9854263 9854281 GATAGTTCTTGCGGTGCTC 58 NA Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 2 2 3 103 2R 9928272 9943273 CCATGGTATTCAGGTGTCG 58 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451 2 1 4 82 2R 10058942 10059798 TTTACCTCGGCATAGGTGC 59 10059841 10059862 AATGATGTTGCACAGTAGTTGG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 3 3 8 81 2R 10064189 10065380 CAAGAACTGTGACATACTTCCTG 59 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 3 3 8 81 2R 10064189 10065380 CAAGAACTGTGACATACTTCCTG 59 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574 1 1 2 80 2R 10121837 10121958 GATTGTCGAAACCAAAGATGAC 58 10121778 10121797 TTCTTACGACTCTCATCGGA 58 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257 1 1 2 80 2R 10389960 10390155 CCGGGAAGAATAAAGGTTTACC 59 10389901 10389925 GAGATAGATTACAGCATTGACTGTC 59 NA Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 1 2 2 80 2R 10395747 10395765 ATATCCAGGATGTCGTCCA 57 10395809 10395900 CCTGGCCGATATCATTTCC 58 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 2 3 4 84 2R 10661506 10662485 ATTCCACGTCAAGGGTCAG 59 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 1 3 5 122 2R 10793452 10797740 TTGATGTGGCAGATTCCTG 57 10793348 10793366 TTTCATATTGGACCTCCGC 57 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 2 5 7 94 2R 11551927 11552825 GGAATTTGCTCCATAGACGAC 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 3 5 7 80 2R 11555162 11555180 AGCTGATTCTACCCATTGC 57 11553477 11555118 GCAGATAGGCATCGAACTC 58 NA Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 2 1 1 60 2R 11879610 11879628 CATCCTGAGCACATTCCGA 59 11879515 11879534 GCCGTAGAATACATCAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601,FBtr0301867 2 4 4 60 2R 12303571 12303590 GACACCGTATTTCTCTTCGT 57 12303530 12303548 CCAGCATATTGGCGATACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 2 3 4 80 2R 12415122 12415141 GATGTGATCAACTTGGAGCC 59 12415183 12416061 CTTGCAGTCGAAGATCTGAC 58 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 1 3 3 80 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541078 12541164 AAGCCCGAATAGAACTTATCG 58 NA Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 3 2 2 84 2R 13406193 13406269 GGTGAAACTTCGAATGTCGG 59 13406315 13406334 AATCATTTCCGGACCAACAC 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 1 3 8 82 2R 13408423 13410365 TCTGTGCGGTCCTAAACTC 59 13408359 13408378 AAACACAGTATTCAACGGCA 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 3 3 8 82 2R 13408429 13410372 TAATGAATCTGTGCGGTCCT 59 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 1 3 8 82 2R 13408423 13410365 TCTGTGCGGTCCTAAACTC 59 13408359 13408378 AAACACAGTATTCAACGGCA 58 NA Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 3 2 2 81 2R 13494101 13494122 GAAACCAGAGCTACTTGATCAC 59 13493971 13494061 ATAAACTTCGTTGAGCTGTGC 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110965,FBtr0086782 2 2 4 115 2R 14019049 14019067 AAGCATCTGAGGAAGAGGG 58 14018880 14018970 GTGGAGTTCGTCAACTGAG 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 2 5 5 81 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042923 14042942 TTAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 1 6 6 129 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175124 14175142 ATATTCCACTCGTCCTCGT 57 NA Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689 1 1 2 167 2R 14548099 14548177 ATCGATAAACCAGCAACGG 58 14547950 14547969 TGAATTGAACGATTCCACGT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944 1 1 4 80 2R 14645588 14645606 GAAATCTTCGCCAGGACAC 58 14645473 14645544 AGACAGAATACTGCAGCGG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086506 2 1 4 111 2R 15124469 15124487 AAAGGTGGCTAGGAAGAGC 59 15124562 15124844 CTGTCGCATCAACTTCTCC 58 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 3 4 6 129 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319634 15319652 AACTGGAGTTCGAGCAGTC 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 2 4 6 91 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 2 3 19 90 2R 15361464 15365132 AGAGACAAATCTGTTCGATCG 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086474 3 1 2 86 2R 15558793 15558876 TTTCTCAGGAAATCAGCCC 57 15558926 15558944 GATAGATTCACCTGGCCTG 57 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 1 3 5 84 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212011 TTTAGGGAGCTAGCCATCTC 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 1 2 4 153 2R 16361413 16361434 GTAAATGTTATGATGGACGACG 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220 2 3 5 82 2R 16493288 16493308 CGATCGTATCATCACCATCTC 58 16493352 16493962 CATTCTCGTGTACGCTCTG 58 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 3 4 4 91 2R 16557770 16557788 GCGATAAAGTTGAGCTGCC 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 2 7 15 120 2R 16910980 16910999 GCAGAACCTATCCAATGGAC 58 16911081 16911489 CAATTTGGACGTCAGTTCCT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 2 8 15 87 2R 16911181 16911199 GTTAACAGCCAGTTGCGAG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 2 2 2 103 2R 17012644 17012662 ACCTGGCGAATCTCATAGC 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071653 3 1 2 93 2R 17410740 17442346 TATGAAAGTCTGCATCGGCA 59 17442401 17442420 ACAGTTCGTGTACCGATCTC 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 1 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 2 4 4 138 2R 18693054 18693179 CACTAAAGTTACAGTCAAGTCCAG 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110 1 1 2 88 2R 18696448 18698944 CAATGGCATTGAGCTGGAC 59 18698996 18699014 CTTCCGGAGATCGTGATCC 59 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290095 2 1 3 121 2R 18764859 18765272 GATACCCTCCCTGGATCTC 58 18765708 18765726 GAATAGCCTTGGAAAGGCT 57 NA Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 2 2 2 60 2R 18782192 18782211 GATCACCAGAATCTGAAGCC 58 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 3 1 1 64 2R 18825640 18825658 ACGCCAGAGATCTGAATGG 59 18826016 18826034 CTTCGTGAGGAAGGAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 1 2 13 83 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564628 19564646 GACTGTAGAGTCCCTCACG 58 NA Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 1 2 2 80 2R 19580314 19580392 AGGTGCCCAATAATACTTCCA 59 19580254 19580274 CAACCAAACTGTAATCTGCGT 59 NA Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 3 3 3 63 2R 19587831 19587850 AAGGCGGAGCTCTTTAAGAG 59 19587730 19587754 CTTCGTAGAATGATATGATGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 2 2 2 63 2R 19777599 19777617 CTACACGTTCAACTCGTCG 58 19777554 19777572 TATGAAGAAGGCTCCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 1 2 2 84 2R 20009282 20009300 CATCACCTGCAAGATGTCC 58 20009346 20009441 GTGCTCGTTATCATCGTAGTC 58 NA InUTR Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 2 4 4 60 2R 20420050 20420125 CGCCTCATCAACTTCATACG 59 20420147 20420166 CATCGTAACACTCGTTGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pof FBgn0035047 FBtr0072327,FBtr0072328 3 2 2 134 2R 20557245 20557263 GTACTCCACCGATGGAGTC 59 20557361 20557433 CAGTGTCGGGTTTCTTGTC 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 3 3 3 81 2R 20721185 20721205 CCTCACATTATCTACCTCCCG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 1 5 5 80 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770666 AGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301851 3 1 5 195 2R 20771011 20771029 AGCCCACCTATAACATGGC 59 20771246 20774755 ATATGCTTCAATCTGTCGTCCT 59 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 2 3 3 86 2R 20853554 20853637 TTAGCCGATATGTTCGACGA 59 20853487 20853505 GTCGATCATGTTCAGCTCG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302573,FBtr0302575 2 2 8 98 2R 20887609 20887627 AACACCAAGAAGGTCATCC 57 20885451 20885811 ATGACTACTAATGAGCACGG 57 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 3 3 3 99 2R 20963061 20963135 AACAATCGCGCAATCTCTG 59 20962980 20962998 CAGTCGCTATCCAAGTCCT 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 2 3 4 87 2R 10510501 10510703 GCAATTAAGACCTGTGCCA 58 10510924 10510943 GGATTAAGCATCTGGGTCAC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 3 5 9 120 3L 135828 135970 AGTATCTGACAAACGGCCA 59 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 2 2 3 82 3L 201052 201181 AGAACCTAAGAGGCCTTCTC 58 201221 201244 CAGAATTAGGTCCTCAAGAAAGAG 59 NA Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072526 2 1 2 125 3L 212541 212619 CGAAGAAATCATAAAGCAGCG 58 212371 212454 ATGATGGGATTGCTGTCCA 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 3 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072524 3 1 2 80 3L 222323 222341 TTAAGGAAACCCTGACCGA 58 222208 222281 TCATTAGTTCCAGGAAACAGC 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565,FBtr0110818 2 3 4 80 3L 444287 444305 TCGGAGAACTATTCCGAGG 58 444135 444245 GATGAAATTGCGATAGTCGTC 57 NA Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 3 2 2 187 3L 838617 839260 TCATCGAGCTCAACAAGCT 59 839411 839429 ATCATCCTTGTTTCCGCCT 59 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 2 6 6 80 3L 998874 998893 CGAATACATAGTCAGTGCCC 58 998721 998833 AAGTTACTCAGATCCAGACGA 58 NA Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 1 2 2 80 3L 1035391 1035410 CAGGATCATTCGTGAATCGG 58 1035452 1035569 TACTGCCATCCCTTCATCAC 59 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 1 2 2 90 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196954 TCATCGTTGGGAATTAAGGAG 57 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 3 3 3 116 3L 1299156 1299174 TCATGGATGATCTGAGCCC 59 1299372 1299390 TGTCATCCAAGTCCTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072704 2 1 3 113 3L 1525383 1525650 GCTGCAAAGCATCAATGTG 58 1525288 1525306 TCGTCCTGATCATCTCTGG 58 NA Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 2 2 2 195 3L 1624585 1624678 TTGTAATAGGCATGTTTCCCTG 58 1624411 1624429 AGTTGCAGTCCACAGTAGG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 3 4 4 80 3L 2498023 2498107 GGAAGATGTGAAGATAAACACCG 59 2498144 2498165 TCTGAGATCCAGCGATTTACTC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072994 1 1 15 86 3L 3078044 3083751 TATACGGCTGCTATGGATCC 59 3083797 3084816 CTGTCGATTCATATAAGTGGCG 59 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 2 3 3 80 3L 3120509 3120530 GGCTCATTATTGGATGGTTCTC 59 3120392 3120468 TAGCAAACGGCAATGAACG 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 2 6 13 129 3L 3578466 3593333 ATTGCAGATATGGAGACTGG 57 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153 1 1 4 145 3L 3832412 3832430 AGAATCTCGGTGGAAGCTC 59 3832539 3832615 TGATTGATGAAAGACGCGC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 3 2 6 86 3L 4129784 4130401 TCGTATCGTAAGGAAGATAGC 57 4129718 4129736 TATTGTCGGCATAAGGTCC 57 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 2 3 3 99 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 2 4 6 239 3L 4418264 4418282 CAGGCGATGTAATTGAGGT 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273233 2 1 10 94 3L 5532468 5532486 TACACAAGAAACGCGAAGC 59 5532350 5532410 CAGGGTCTTCACCTCTTCG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 1 4 10 82 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 3 6 6 79 3L 5765428 5765447 GAACGGCTAGAGGATATGGG 59 5765546 5765564 CGCTCCAAAGAGAATTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552,FBtr0299551 2 2 9 130 3L 7156964 7157356 CATAATATCTCCAAGAATCGGAGG 58 7156857 7156875 TTAATCTTGCCCTCGTGCT 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 3 2 3 82 3L 7460745 7460830 CGAAATACGCATTTATGCCA 57 7460875 7460893 GGTACTGTTGTGCAAACAG 57 NA Nonspecific Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 2 3 4 92 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506689 7506707 GTCACTGGCACATAGACAC 58 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 2 3 3 87 3L 7558076 7558156 TAGCTGCCTCGATATCGAC 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 2 4 15 157 3L 7654600 7655093 GATCTCATCGCAGAAACAGG 58 7654462 7654480 TTTGGTGTGGGTGTATCGT 59 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0110885 1 1 2 96 3L 7729958 7731442 ACATGAATTCTGTGCTGCAG 59 7729881 7729899 GGATCGTTGAAGACAGCCT 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0076768,FBtr0300413 3 3 4 98 3L 7921083 7921101 CTCAATGGTGGACTGACCT 59 7919924 7921023 CATGTCGTTATCGTTTATGCG 58 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112601 2 1 5 137 3L 8072733 8086173 CATTATCAGATGACAGACTTCTCG 59 8086269 8086287 AGTTAGGGTGCTTATGGCG 59 NA Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 1 2 2 80 3L 8372408 8372963 GTTTGTCATCCCAGCTCCT 59 8373007 8373025 CCAGACAACTGCTATTGGC 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 3 4 5 115 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586655 8586674 CTAAGCGGTAAGTCGATGTC 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156 1 1 13 107 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8631260 8631278 ATACTGGCGCTGATACTGG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 1 4 5 161 3L 8770403 8775651 AATGCACCACAAAGCATCG 59 8778117 8778135 ATTTAACTGCGTTCGCACC 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137 1 2 5 80 3L 8929865 8930047 GATGAACTTTAGGAAAGTATCCGG 59 8929808 8929832 GACAATGTGGATATGATACTTGGAC 59 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 3 5 5 126 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100465 9100727 GTGGGTACATTCATTGGCAC 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076427 2 1 2 132 3L 9492178 9492273 TAACATAGTGGACAGCGGG 59 9490254 9490273 AAAGTCATTTCCAGCCAAGG 58 NA Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 2 3 3 123 3L 9624228 9624300 ACAAGTTCACAGGAGATGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 2 2 3 140 3L 9721699 9721819 CACCCTGGACTTTATTAGATCAC 58 9721918 9721937 TAAAGTTGAAGCGAGTGAGC 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 3 2 4 95 3L 9894108 9894450 TTCGCTTAAGAATCCCGAG 57 9894509 9894527 TTTCTTAACATGTCGGCCA 57 NA Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 3 2 2 139 3L 10631787 10632319 CACCCTAACATTGGTCGTC 58 10632422 10632440 GCTTGAGTATCAGCTTCCC 58 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 3 1 1 111 3L 10883144 10883320 CAAAGATGTTCCGCTACCTG 59 10883394 10883412 ATGTCGGAACCGATCTTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076205 2 1 3 80 3L 11065497 11065666 GAAACAGCATGCAGATGCT 59 11065707 11065728 CTTGAAGTATGATATGCGTGGT 58 NA Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 2 3 3 80 3L 11622535 11622553 GAATGTGACGTTCAAGACG 57 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 2 4 4 93 3L 11873251 11873328 GCATCACAGTGTGATAATTCC 57 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 2 5 5 193 3L 12021961 12048294 GATCTCCAGTCCATCCGAC 59 12020252 12021806 CCATCAACATCTTTCAGCGAG 59 NA Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 3 2 2 89 3L 12064089 12064172 GTGGCAAGGTGATATACTCCA 59 12064020 12064038 ACGATGTCCAATTGTCCCT 59 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010 2 1 2 81 3L 12266715 12267115 TTCCCATCGTCAGATGAGC 59 12266652 12266670 GAATCTTCTGGAAGGGCGA 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 3 3 3 80 3L 12468728 12468749 AGAGTGATGAAGAGCTATACAC 57 12468611 12468689 CTTGGGTAACCTTAACAATGC 57 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 1 3 3 80 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487 1 1 2 127 3L 13455002 13455022 GTATTAGCAAGAGGATCCGTG 58 13455111 13455313 AGTTTGAGATTGGGCAACG 58 NA Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 1 2 2 80 3L 13507891 13507970 GACAATTGCCGAAAGTGGT 59 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 1 2 2 90 3L 13994647 13994667 TCGGTTACTGTACAGGTATCC 58 13994518 13994595 ATAGGGATTGCGCTTTCTG 58 NA Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 2 2 2 103 3L 14532076 14532094 TCTACAAGGGTCTGGTTCC 58 14532159 14532662 CACCACATACTTGTAGAGCAG 58 NA Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 3 2 2 103 3L 14532076 14532094 TCTACAAGGGTCTGGTTCC 58 14532160 14532662 CACCACATACTTGTAGAGCA 57 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 3 3 3 80 3L 14737473 14737492 GTCAACTATATGCCAAGCGA 58 14737534 14737640 CCATGATGGACGTATTCTCC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 3 4 4 88 3L 15593708 15593797 CAAGTTCAAGGTCTCTACGA 57 15593848 15593866 AGTACTCATAGTTGTCGCG 57 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 3 3 4 84 3L 15815227 15815246 TACTGTATCCTCGAAGCGTC 59 15815103 15815182 GCTGACAATCTTCTCATTGCT 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575 2 1 7 120 3L 16056828 16056994 GAAAGCGAAGCTGAGAACG 59 16057076 16057096 TATTAGTGGGACTATCGCTGG 58 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 3 5 7 81 3L 16952971 16954604 TCAGGAGCTACCAGATTCG 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 2 2 2 89 3L 17363245 17363328 GTCACAGAGAATGCTGTTACTG 59 17363177 17363195 AGTAATGGTTCCGGATGGG 59 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 1 4 4 80 3L 18824238 18824261 GGAGTACTGTAATCTACACAAACG 59 18824117 18824199 CCAAAGTGTAATCTGCGGG 58 NA Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 1 2 2 80 3L 19603759 19603778 TTTAGGAGCATCCCTTTCCG 59 19603640 19603719 TGTAGACGTTCTGGGATATCTG 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 2 2 4 80 3L 20769143 20769286 GGATCTTTAAGGAATTGGGAACTC 59 20769325 20769343 ACAACATGTTCTTCACGGC 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0078289 2 1 4 115 3L 21028385 21061819 GTCGATCTCGATGATAACTTTCC 59 21061894 21061912 CTATCTGTGCAGGTGGAGG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304 1 1 4 80 3L 21208198 21208679 AACCGATTCACTGAAAGCC 58 21208723 21208741 GGTCCTTGAGTGATCTGCT 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413 3 1 3 112 3L 21266784 21272588 ATAGCCTACTACTGGGAGGG 59 21266691 21266709 ATGCCATGATCCTTCAGCA 59 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 3 2 3 80 3L 21565367 21565387 ATATGCTGCAACATGAGACTC 58 21565429 21565503 GTTGGAAGTCTCTGGTTGC 58 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 2 3 3 82 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612187 21612210 CTGGATGAATCCATCTTTGTACTC 59 NA Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 1 1 1 102 3L 22680160 22680178 TAAGGAGGTCATCCGAAGC 58 22680011 22680029 AATGCTCGTGAGGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078561 1 1 2 81 3L 22939030 22939379 GATAAAGAAATTGGTTCGGCG 58 22939420 22939440 GTCCCAGAGAATTGGATTGTC 58 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 1 2 3 225 3L 23093412 23093430 AATACTTTGGCAAGCCAGC 59 23095383 23095401 TTGTGCGCATTGACATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687 1 1 2 80 3R 67413 67487 AAGGAAGTGGAACTGACGG 59 67351 67369 TGCGAAGGCTATCGTAGTG 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 1 4 4 175 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 2 2 2 88 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216887 216906 ATTGGCCGTACAATAATGCT 58 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 1 4 4 80 3R 534706 534724 ATCGAGGATAAGATCCGGG 58 534768 534896 TTTCAGTTCCTCTTGCGAG 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 1 13 19 122 3R 1121451 1121469 GATGAAGACAAGAAGGCCG 58 1120562 1121365 CTCATCTTCCGAGGATCGG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 1 4 19 132 3R 1129894 1138718 AAGAACAGGTCACGTAGGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 2 4 19 134 3R 1129895 1138719 CAAGAACAGGTCACGTAGG 57 1125242 1125260 GAGTCCAAGTCGAATGGAG 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 3 4 19 134 3R 1129895 1138720 TCAAGAACAGGTCACGTAGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078764 2 1 2 160 3R 1324581 1327766 CTAACAAAGGAGAGTCTGCC 58 1319153 1319172 CATCCTAGCTTGATGTGTCC 58 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733 3 2 3 118 3R 1472925 1474227 GAGTCGGAGACTATGTTTACGT 59 1472828 1472847 GTAGAAGCACATGACCTTCG 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 1 3 3 80 3R 1535945 1536020 TCTTACTCCTGCATTGCGA 59 1536063 1536082 ATTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 1 3 12 80 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586624 1586642 AAGACGCTTCTGGTACTCG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 3 3 12 93 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586600 1586620 GTTCTTGCTGTTTAGGGATCG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 3 2 12 89 3R 1586673 1587369 ATAACTGGCAAATCGTGGG 58 1586602 1586620 TCTTGCTGTTTAGGGATCG 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 3 2 4 83 3R 2479834 2480202 CTGGATGAAGATCTCCAATGC 58 2480247 2480265 GTTCTCGTCTTCGGAGACC 59 NA Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 1 1 1 124 3R 2886665 2886685 GGTCCTACCATCTAAATGCAC 58 2886823 2886844 CTTGATCACATGAATCACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081612 3 1 9 156 3R 2947472 2949643 CAACAAACAAGTTACAAGCTCC 58 2947337 2947357 CACCATCTCCTTCATATCGTC 58 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 2 2 4 179 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118150 3120143 CAGAAAGTGACCTTTCTGCAG 59 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300685 2 1 2 102 3R 3745200 3745219 TTTGTACTCCGGTCTGAACC 59 3744991 3745137 ATACAGGGTCTTCAGACTGTC 59 NA Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 1 1 1 229 3R 4169502 4169521 GAAACTGTTTCTCTTTGCGC 58 4169768 4169786 GTTATCCATACTGCCGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 1 2 2 60 3R 4476034 4476213 TTTGTTTGCAACCGGATCC 59 4475992 4476013 ATTATTCAGGCTTAGCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876 3 2 4 80 3R 4612642 4616245 CGAAGGGATGTCAAGATAACC 58 4612582 4612601 CTCGAGCGCTGATTTATGTG 59 NA Nonspecific Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112822 2 1 8 128 3R 4659861 4659880 GAATGCGTCCCGTAATATCG 59 4659452 4659707 TGATAGCGTCTGTATTTGCC 58 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 1 2 4 94 3R 4766832 4766853 GAATCTGTATGACCTGTTCGTC 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 2 2 4 109 3R 5180480 5180498 GGAACGTGAATCTAACCCA 57 5180569 5180659 TTCTAAGCGAGTCCTTATAGC 57 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 3 3 3 96 3R 5284386 5284404 ATCAGCCTGATCAAATCCG 57 5284247 5284327 TGTGTCCATCAATCTGTAGG 57 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 2 3 3 90 3R 5399132 5399151 CTGTACAACGGGATGATTGG 58 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 Dh FBgn0012344 FBtr0112870 3 1 2 171 3R 5466103 5466121 CTTCAGCACCTTCCTTTGC 59 5466252 5469225 GGCTTTCATCATTGGAGTATAGC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 3 3 4 72 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520883 5520901 CCGATAGAACTCCGACCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 3 2 6 171 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930491 5930509 TCTTCTCCTGACGCAACTG 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 3 3 6 133 3R 5930725 5930801 TTCGAATCAAGATCGCTGG 58 5930610 5930630 CGACAGATGATACTCCAACAG 58 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 3 5 5 90 3R 6041343 6042795 TGGATGAGATATCCGAGCT 57 6042847 6042867 GCGCTTATGATATACTCTCGT 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 1 3 4 83 3R 6121773 6122463 GTGGCTGAAATCTTCACCG 59 6122510 6122528 TTCAGGGTAATCGAAGCCG 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 3 3 4 86 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122530 ATTTCAGGGTAATCGAAGCC 58 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118 2 1 2 60 3R 6517164 6518078 CAAATTGGAACCGAACCAC 57 6518099 6518120 CTGGCTAATGTTCTTATTTGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 1 2 4 80 3R 6589612 6589632 ACTGTTGCTAATCGATTCAGG 58 6589671 6589890 TGGCGTTGATCTTCTAAATCTG 58 NA Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 2 2 2 100 3R 7059034 7059132 GAGAATCGCATTAAAGTGATGC 58 7058955 7058973 TTCAGAGTGCTCTCCAGTG 59 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 3 3 3 75 3R 7504709 7504729 CATATCTGGTGGTAGCAAGTC 58 7504583 7504672 TTTGGTAAGCATGGGAGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 3 2 6 121 3R 7628396 7636088 CTGATGTATGGTCGCTATACC 57 7628047 7628313 CCCAGCAGTTCCTTATTCC 57 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 3 5 15 149 3R 7815047 7817813 GAGTCCTCAGATAACTCCAGC 59 7814508 7814937 GATGGTGTCCACATTGAACG 59 NA Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 1 2 2 84 3R 8668033 8668331 GAATGCAAACTCTGGCTCG 59 8667967 8667985 TAGTAGAATTGCCGCCAGG 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 136 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210484 9210502 TTAACTCGATGTGCACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082856,FBtr0082855 1 3 4 105 3R 9468919 9471482 GACGACAGGAAACTGTTTGTC 59 9468769 9468789 TCTTGACATTGATGCTCTCGA 59 NA Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 1 2 2 119 3R 10399020 10399040 TTGCCAAAGATTCTTCTGGTC 58 10398849 10398939 ATAGGACGCACTTGAAGGG 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 3 2 2 93 3R 11092082 11092163 GTGCCCTTAAGTCTTTCCTG 58 11092219 11092237 CCAATGGAAACGATCAGGC 59 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152 1 1 2 82 3R 11366255 11366465 GACGTATCTCGGCTTCCTC 59 11366191 11366211 GAATGTTGCCGAAACATATGC 59 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 1 1 1 100 3R 11849429 11849447 ATCCGAATCAGACCTGGTC 58 11849839 11849857 GTCTGGTTTCGATTGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 3 5 5 123 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377363 12377382 TTTATGACTGTGGAAGCGGA 59 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 1 4 4 80 3R 12474343 12474430 GTAGACATTAAACGCTATGCCA 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 2 2 2 166 3R 12959026 12959045 TGCAGAACCAAGATGATGTG 58 12959173 12959257 ATACACATCCGGATAGCCAC 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853,FBtr0302852,FBtr0300053 1 3 4 80 3R 13044703 13044724 CTTCAAGGAATAGCCTTCTCCT 59 13044590 13044663 TCCCAAGTACTCGTATGCAG 59 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 2 4 4 107 3R 13533849 13533867 CTCAATATTCGCCGTACCC 58 13533696 13533778 GATTCGGTTCGGGATACTG 57 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100377 1 1 7 134 3R 13832727 13832811 CCTATGAGGGCTATGAAGGA 58 13833036 13833056 GCATATTTACCTGCAGATCCT 58 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 2 3 6 86 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079436 14079454 AAATACGACTGCGGAACCA 59 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 2 5 5 113 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132726 14133185 GATACAGGATGGGACTGGC 59 NA Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 1 2 2 88 3R 14197162 14197464 ACAATTCTGGATTCCCTGGA 58 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 2 2 2 81 3R 14234395 14234413 GGAGAACCTCAATCTGGAC 57 14234154 14234353 GTAGATGAATTGATTGAGCACG 58 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400 2 1 2 98 3R 15476813 15476994 CGAATTCTGACTGCTATCCG 58 15477053 15477073 CATACTCCCTCATCAAAGTCC 58 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 1 2 2 80 3R 15725645 15725663 CTGTGAAGTCGATAGCCCA 59 15725518 15725605 GCAGCAGTTGTTCCATTATAGAG 59 NA Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 3 2 2 98 3R 16334752 16334880 GCAACATTGTATTTGGTACTGG 58 16334675 16334694 GGACGAACAGGAACATTTCC 59 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 2 2 2 61 3R 16564040 16564324 GGCTCCAGAAACTATCCCA 58 16563997 16564015 CTTCTGTATCCACCACGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083960 3 1 8 154 3R 16618132 16618150 ACGAGGACGAACTGATTCC 59 16618267 16620869 ATCATTTAGCTGTCGCACTG 58 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 2 5 8 87 3R 16624123 16631681 GTGAATACGTAGTCGGTAAACG 59 16631729 16631747 CCTATTAAACCGCTCGGGT 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 1 2 5 154 3R 17351033 17351051 CAAAGGCGATACCAAGCTG 59 17351166 17351263 CGCGCCAAATAATAAGAAAGGA 59 NA Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407 1 1 2 80 3R 17564347 17564432 AATGTTGGTGAACCCTGCT 59 17564285 17564304 TTAGGTGACACATCTGTGCA 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874 3 1 2 94 3R 17786622 17821252 TATTGTGGCCCTAGAACGC 59 17821309 17821328 CGATATTCAAGTGGCTGCAC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 3 5 5 89 3R 17888572 17894845 CATCCAGATTTCAACTTTGTCG 58 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 3 2 2 89 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128543 18128562 GAATACACAATGATGGGCAG 57 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 1 5 5 80 3R 18430301 18430378 GCAGCTTTAAGAAGACTCCC 58 18430419 18430439 GCAAATACAGCACAAGATCAC 58 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 3 2 2 106 3R 18523290 18523368 TCACCAAAGCTCAATTGGC 59 18523437 18523456 CAGTCTCTGCATAACATGCT 58 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 2 2 3 131 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542764 18542941 GTAATGCATTTGGATACTGCCA 59 NA Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 1 2 2 87 3R 19382009 19382027 ATTTCTGTTTGCAGCCGAG 59 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 3 4 4 82 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 2 3 3 86 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688921 19691289 CAAGTAACCATTGTAGCCGAG 59 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 1 2 2 80 3R 19723176 19723195 CACAACTACCTGTAGTCCAC 57 19723055 19723136 GATACACATTGTACCATATCGC 57 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 3 5 5 81 3R 19798242 19798343 TTATAAAGAATCCCGTTGCCC 58 19798386 19798404 AATCGCTTACGGCAAACTG 59 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 2 4 4 70 3R 19815428 19815506 ATTGGAGCAGACAACTGGA 59 19815376 19815394 GTTGACGGGAACAAGTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 2 3 5 109 3R 19839345 19856230 CAATTGCATCCCAAGACTCTG 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 5 6 80 3R 20045866 20045947 AGAGATTACTGGCTGCGTC 59 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 3 4 6 120 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079743 20079761 CACAGGACGTGTTGATAGC 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 2 2 3 102 3R 20476304 20476382 CCAGGCTACCATATCCCAG 59 20476446 20476466 CTCCTTGTCCTTGCTAAACTG 59 NA Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 1 2 2 81 3R 20607107 20607180 ATGACTTCGCTAACGTGGT 59 20607225 20607243 AACAGATCGATGTCGTGCA 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 3 2 3 155 3R 20677422 20677566 GGAGCAACTATTGCTCAAGG 59 20677730 20677754 CTCGACGTTTATTAGATGTAGTACG 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 2 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 2 1 1 60 3R 21104511 21104532 TCAGTTTAAATTGGAGGTGGAG 58 21104410 21104428 CACCACTACCGTAGAATGC 58 NA DesignNoJunction Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113384,FBtr0084928,FBtr0084927 2 3 7 93 3R 21532075 21532093 ATTAACGAGCGGAGTCCTC 59 21527375 21532020 TTGTTTCAAGATCTTCGACGC 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 1 4 7 85 3R 21580125 21580143 CATTCGATTCGTTTGCGAC 58 21575103 21580078 AAGTGGCCTCTATAAACTTGC 58 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 1 3 5 88 3R 21711544 21711628 GGAACCAACGGATAAATTCG 57 21711678 21711697 AGAACATGATGAGCAGTGAG 57 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290140 3 1 5 87 3R 21740144 21740165 CGTAGAAGGCTGTGATTATGAG 58 21740212 21740290 ACTGAGCGATCCAGATTCAG 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 1 4 10 113 3R 22416346 22416364 ATAATGACGACAGCGACCA 59 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 2 1 1 88 3R 23515658 23515676 TCTGACGGCTATCAAGCAG 59 23516276 23516294 CCTTCATGAAGCCCATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112583 3 2 3 189 3R 23909325 23909344 TATCAGCAGGGATACATGGG 58 23910334 23911142 AGAGTAGAGGATAAACCTGGG 58 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085298 1 1 6 100 3R 24425713 24426439 GAGCAAGATGACTTTCCTCAG 58 24426501 24426519 TTTAGGTTCTCGTCGGTGG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 3 2 13 80 3R 24728519 24745224 CGACTATCTAACAGCAAAGCC 59 24745266 24745284 TGATGGAGAATGTCTCCGG 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 1 5 10 116 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 2 3 4 113 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 1 3 5 83 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423185 25423894 CGTTGGACTTTCACATGGTC 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 3 3 5 112 3R 25423020 25423038 ACAGAGACGACATCGAAGG 59 25423186 25423894 CGTTGGACTTTCACATGGT 58 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475 2 1 2 135 3R 25566131 25566297 TGCAACTTACGGAGGAGAC 59 25566396 25566414 AGAGGACGCACTTTCATCC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085497 2 1 6 92 3R 25722869 25722889 CTAGATGGTCATGTGATTGGT 57 25722941 25723031 CGAGTTTCCAAGTTTAGTTCC 57 NA Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0085505 2 1 2 80 3R 25771020 25771095 TCAACCAAGAATTGCTCGG 58 25771136 25771157 TGTATCACAGTTATGCTTAGCC 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 1 3 3 226 3R 25959291 25959309 AAGGACTGGAAGAACGTGG 59 25959022 25959040 AGGAAGCCATCTATGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 3 3 4 88 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032364 26032382 ACATTCAGGTAGTTGTCGG 57 NA Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 2 1 1 129 3R 26247245 26247263 AATGAAGGAGACAGGAGGC 59 26247025 26247044 GGACAAGTCGCTGTAATTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 1 4 4 107 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 1 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 1 8 8 166 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158059 TAAACCAATTGCTTGCAGC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 3 7 7 93 4 258102 258120 GAGCTCGACTTACACAGTC 57 258177 260949 TAGCGGATTCTTTACTGGC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 2 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 1 2 2 94 4 330250 330328 ATTGCAGCAGATTGGTCAG 58 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 3 2 6 99 4 350956 363557 GCAAACACAAGTAATAGGCG 57 350034 350052 GAATGCGTTTACCACTCGT 58 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 1 4 4 80 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383623 383641 GTAGAACTGTGCAACGAGC 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 2 3 5 116 4 886473 886570 CACTTGGCAATAACCGCTC 59 886375 886395 GGTATATCGGATGATAGGCCG 59 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0112904 3 1 3 118 4 948105 948123 AATATCGTTGGCGTTAGCG 58 947274 948024 CCCGTTGATACATACTCTGC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 2 9 9 80 4 1068496 1068516 AGGATATCTGTCTCCTGAGGT 59 1068343 1068457 TAAAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089194 3 1 3 109 4 1153191 1154510 TATCCTAGGGCAACCTCGA 59 1154580 1154601 CGTTCAACTGTTAGAAATGCAG 58 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091631 1 2 3 80 4 1265750 1265771 ATCTGATGGAGTCTTCAATAGC 57 1265812 1266148 CAGCGTTAATCCCTTTGCT 58 NA Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 1 2 2 80 X 818648 818788 CGGACAACACAGTCAATATCC 59 818588 818606 AGTAGATGTAGCGCAGCAG 59 NA InUTR Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 3 2 2 82 X 1776706 1776782 TTGGCGAGATCTAAGATCCAG 59 1776644 1776667 CCAATGTACTCGATTATCATGGTG 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089990 2 1 5 90 X 1788604 1788622 CATAGAGCTGACCAACTCG 57 1786144 1788554 TATCATATCCTGTAGATCGGGAC 58 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 2 3 3 96 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800184 1800204 ACAGCAGATAAAGGTACTTGC 58 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528 2 1 3 103 X 2340217 2340451 CCGATAAGAGTCCAATGTTCC 58 2340134 2340152 TAGATCTCTGGCCATGCAG 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 3 4 12 122 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215083 TACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 3 3 3 69 X 3603910 3603929 GTTTCCTTTGCGTCTTCTCC 59 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 2 3 3 172 X 3770265 3770355 GTCAGCAGAAGAAACTGCC 59 3770547 3770570 GAACATGGTGAAGATATGGAAGAC 59 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 3 3 3 82 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309885 5309905 AAATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0300771 2 1 2 82 X 6980001 6981654 CCGGAATGTCACGTTATGC 59 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572,FBtr0300771 3 2 2 213 X 6978632 6978652 CATTCAACATGATGCACAGAG 58 6973208 6973226 TGCTGGTGGTAAAGTAGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ct FBgn0004198 FBtr0071069 3 1 3 96 X 7526359 7526805 CCAATTGATTGGTAATACTCCCAC 59 7539842 7539862 GATAGCTGCTCTTTGAGTGTG 59 NA InUTR Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 2 2 2 80 X 7582353 7582433 GCATGTGCTTTCTACACCA 58 7582291 7582309 GCATAATAAGTTCCCGGCA 58 NA Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 3 2 2 83 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632463 7632483 CGAGAGGGTGTAATCACTACC 59 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 1 3 3 90 X 7991393 7991476 AATCATCAGGATTATTTGGGCG 59 7991324 7991342 TGACCATGTCCACCAAGAC 59 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236 2 1 3 129 X 8381711 8381729 TACAAAGTGGCCAAGTCCA 59 8381017 8381624 CATACGGGACCTTAAAGTTATAGTC 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352 1 1 5 80 X 8992439 8993361 CCCACTATATGCTAGATCAGGAC 59 8992381 8992402 CATTGATGTAGCCCGATTTGAG 59 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 1 2 2 95 X 9091370 9091388 AAGGATGTGATCGGAGCAG 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 3 3 4 96 X 10393679 10404377 GAGGAAGGGACCTTCATAGTG 59 10393603 10393621 AATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 1 2 2 63 X 10500508 10500527 CCGTTGGCAATATGATTGAC 57 10500165 10500183 TTTATGTGGTTGTCGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 1 2 2 87 X 10806371 10806552 ACATACACAGTCCCAAATACCA 59 10806600 10806618 AGACTGCTGTCCTTGTAGC 59 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073526 3 1 2 198 X 11583563 11587584 GAATTTACCGTTGGGCTCC 58 11587746 11587764 GTTGAACATCAACCGGCTG 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 3 5 7 81 X 12090584 12090604 TACAAGCTGAAGTACGAGGAG 59 12090642 12091227 GAATATAATCCTTCTGCAGCTGAC 59 NA Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 1 1 1 104 X 13055017 13055037 TCCCTGGATGTGATTTATGAC 57 13055159 13055177 GATATTAGCATGCGCTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 2 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 2 7 10 122 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488364 13488382 CTCGTTCGAGTCCTTGGAG 59 NA Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 2 1 1 105 X 13509709 13509731 CAGTACTTGAGCAAGATGTACAG 59 13509370 13509388 TGCTCAGTCCCAGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451,FBtr0301449,FBtr0112980 3 3 5 83 X 13539829 13543422 GTAATTTCGGCATGAGAATGAC 58 13543466 13543484 TCGATGGTATGCGAAATCC 57 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 2 3 3 85 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219667 15219691 CTCTTGTAGTTCTAGTTTCTTCAGC 59 NA Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059 2 1 2 96 X 15597282 15597300 ACTATGTGATCTCCGGCTG 59 15597108 15597222 TGTTTGCAATGCGTTTGGT 59 NA Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074089 2 1 2 81 X 15650534 15650614 TTTGCAACCTAAGCTTTGCT 59 15650657 15650676 CGTTGGATCTTCCTTCAGTG 58 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 3 3 3 99 X 15744651 15744669 GTAACCTTAGGAGCACTGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074111 3 1 6 87 X 15754280 15754300 GCGTGTAAGTAACGTATTGTC 57 15754346 15755184 CTGCAGAAAGTTCATAGATCAG 57 NA InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 1 2 3 80 X 16323423 16324657 AAATCCCTAACAGTCTATCCAC 57 16324695 16324716 CTTCATCTGATAGTCGTCATCC 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 3 2 3 80 X 16323430 16324662 TAACAGTCTATCCACTGCCT 57 16324701 16324723 CTATGGACTTCATCTGATAGTCG 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 1 2 6 174 X 17156846 17156864 GTATGATGAATCTGGGCGG 58 17157001 17163972 GTATTGGCGCAAATATCCAC 57 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 2 3 3 80 X 17462411 17462429 ACCAATTTACACGGAGCAC 58 17462281 17462367 CCGGTCTTAACGTCTTCAG 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 1 3 3 80 X 17469922 17469940 CGTTCAGTTTGGGTTCGAG 59 17469786 17469878 ATTATCGGAATGGGCTTGC 58 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510 2 1 4 175 X 17767420 17768448 CTATTATACTATGTCCGCTTATGGG 58 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300976 3 1 6 80 X 17796054 17796073 GCAAGTCGAGATCAATACGA 57 17796113 17796651 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089657,FBtr0089662,FBtr0089663 2 4 8 108 X 17847372 17870394 GATGGTTACGGGTCTTTGC 58 17847282 17847300 CATGATCGTGAGGAATGGG 58 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 3 3 8 99 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824460 17824628 CAAATGTTGACCTAGTGCACC 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 2 3 9 85 X 18267160 18267178 ATGCAGAAGGTGGTCTACG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 3 2 2 88 X 19019674 19020053 TACAATCCGAGATCGTGCA 58 19019604 19019623 TAGTCGTACACGTACAGCTG 59 NA InUTR Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290275 1 1 2 84 X 19020849 19020867 CAAAGAGGCCTTTGTCCAC 59 19020487 19020801 AAAGAGGTAGGTGTCGTCG 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 1 2 4 96 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040092 19040110 GAGAATCGTTGACTGCTGC 59 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 2 2 2 80 X 19413854 19413944 AACATTATGCGCATGTCCG 59 19413792 19413811 TTCGAACTGGATTTCTGGGA 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302864 2 1 6 81 X 19418178 19422673 GTCTGATAACGATGACAAGATACAG 59 19422711 19422730 ATCCACATTGATGGTTTCGC 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862 1 1 6 80 X 19418186 19422683 ACGATGACAAGAAGAATAGGC 58 19422725 19422743 TGGAAAGCACATCATCCAC 58 NA Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 2 2 2 144 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461956 19461974 ATTTCAACGTTGTCGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074817,FBtr0074815,FBtr0074816 3 3 3 154 X 19638347 19638365 TATAGCTATCGCCAGGCTC 58 19635118 19635136 TTCTGGTTAGGGAACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089399 2 1 13 80 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101658 20104508 TCTTCGTCGTCATAATAATCCG 58 NA Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 3 1 1 193 X 20606912 20606931 GAACAAAGTCAAGGCTTCAC 57 20606675 20606694 TAAGCAGGATCAGTGTCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624,FBtr0077267 2 2 2 166 X 20902638 20902656 GAAGCTTATCGGATGGCAG 58 20902438 20902456 TCGACAGATCTACCTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 1 2 2 80 X 21195591 21195747 CTTCCAGTATTCGATCGGG 57 21195789 21195809 ACACCTTAACGTTCTCTAAGC 58 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 1 3 5 94 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 3 1 1 167 X 6174522 6174541 AATGTGAAGGTGTATCGCGA 59 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:CR31603 FBgn0051603 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:35Ba FBgn0011862 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A934 FBgn0086036 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-2b-2 FBgn0046823 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:SeC FBgn0011987 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-G1952 FBgn0082950 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD11c FBgn0086070 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-U1356c FBgn0082947 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:85Ae FBgn0012028 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:85Ab FBgn0012025 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:90Cb FBgn0011945 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:W FBgn0013709 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 2 1 1 61 XHet 62217 62558 GTTCGCCGTAGTCAAAGTC 59 62583 62601 CGTCTCTGGTCAAGATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-3436a FBgn0086668 FBtr0091752 3 1 1 85 X 6636804 6636822 ACAACTGCTGACGATACGT 59 6636737 6636759 GTAGAGACTAGCTCATTGAAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42346 FBgn0259677 FBtr0299928 2 1 1 80 X 22281553 22281894 AGACTGGAGGAGAATCCAC 58 22281938 22281956 CGACCATTTACGGTGATCC 58 NA Drosophila melanogaster 61 CG42346 FBgn0259677 FBtr0299928 1 1 1 80 X 22281552 22281894 AAGACTGGAGGAGAATCCAC 58 22281937 22281955 GACCATTTACGGTGATCCC 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299525,FBtr0299522,FBtr0299523,FBtr0299526 2 5 5 80 X 21898313 21898332 ATTTCGGTGCATGTATCCAG 58 21898374 21898508 GAGTGCAATCTTAGCAAACC 57 NA Drosophila melanogaster 61 lcs FBgn0028583 FBtr0077220 1 1 1 60 X 21267981 21267999 CACATCCACGACAACTGAG 58 21267939 21267957 TGTAGTGGACGAAGCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tty FBgn0015558 FBtr0077224 1 1 1 91 X 21207502 21207814 GATCTACCTGGAGAGCCTG 58 21207429 21207449 GGGTCATGAGATAGAAGAGCA 59 NA Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 1 2 2 80 X 21195591 21195747 CTTCCAGTATTCGATCGGG 57 21195789 21195809 ACACCTTAACGTTCTCTAAGC 58 NA Drosophila melanogaster 61 CG33714 FBgn0064117 FBtr0091704 1 1 2 109 X 21190250 21190269 GTATTTACGCAACGCAACTG 58 21190078 21190096 ACTGTCCACGGTAGATTGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0077241,FBtr0113007 1 2 2 105 X 20906738 20907434 ATTTCTATAGCGCTACCGAC 57 20907567 20907588 GTAATCTTCTGAAAGCTCAGAC 57 NA Drosophila melanogaster 61 CG11666 FBgn0040648 FBtr0077240 3 1 1 60 X 20855776 20855796 AGGATGTGGATAAGGATCTCG 58 20855818 20855836 TCATGGTTGTACTGCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sdic1 FBgn0067861 FBtr0089604 3 1 1 290 X 20068893 20068978 TCTGGTCGCTAAAGGACAC 59 20068621 20068639 CCTAGATCTCGTCACCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9581 FBgn0031093 FBtr0070026 1 1 1 86 X 20063441 20063516 TTGTCACATGCTCGTTCTG 58 20063373 20063391 TAGAAGTCCGAGTTCTGGC 58 NA Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 3 1 1 215 X 20044243 20044264 TCTATAGAGATCCGGTCTACAC 57 20044801 20044819 GATTGTCCTTGCACTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33253 FBgn0030992 FBtr0074668 3 1 1 128 X 19080126 19080144 CACCAGGAATCTGTCCGAG 59 19080234 19080325 AAGGATACGTCCTTGATCTCC 59 NA Drosophila melanogaster 61 upd2 FBgn0030904 FBtr0300182 3 1 1 128 X 18136200 18136224 GATGAGCGAATACCAAGATATAACC 59 18135898 18136115 CAAGTCTTTAGCTTCACCGC 59 NA Drosophila melanogaster 61 upd2 FBgn0030904 FBtr0300182 2 1 1 126 X 18136200 18136224 GATGAGCGAATACCAAGATATAACC 59 18135900 18136116 AGTCTTTAGCTTCACCGCA 59 NA Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299577,FBtr0299578 2 2 2 60 X 16917162 16917182 CGAGATATTGGATGACCTCAC 58 16917203 16917222 TGTAATTGCGATGAAGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9609 FBgn0030787 FBtr0074356 1 1 1 129 X 16680527 16680605 CAGGGATTAAGAAGCACGC 59 16680416 16680434 CACTTCACCGTCTTCTTGG 58 NA Drosophila melanogaster 61 Twdlalpha FBgn0052574 FBtr0074329 2 1 1 132 X 16637874 16637975 AATTCAGGCCGAATACGAC 58 16638071 16638089 GTAGTTAGAGCTGCCAGAG 57 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 3 2 2 143 X 16605606 16605698 AGTTTCGGTTCTCTGGACC 59 16605805 16605823 GAACCTTACAGAATCGCGG 58 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281,FBtr0074279 2 2 3 90 X 16342747 16343911 GTTATGAACACGCTAGAAGCG 59 16343963 16343981 AAATTGCCGACAAATGCGA 59 NA Drosophila melanogaster 61 CalpC FBgn0260450 FBtr0074226 1 1 1 85 X 16220692 16220786 TAACTACAGACTCTCCAGCCT 59 16220833 16220851 TCGAGAACGTGTCCTTCAG 59 NA Drosophila melanogaster 61 dpr18 FBgn0030723 FBtr0074206 2 1 1 80 X 15959723 15960411 CAAGTTCTATACACGACATCCG 59 15960452 15960470 TAATGAACGATTCTCGCCG 58 NA Drosophila melanogaster 61 Aats-arg FBgn0027093 FBtr0074178 2 1 1 80 X 15737936 15737954 GACGTCGATCTTGTTCAGC 59 15737811 15737895 CTCAGCAATGGACTTCTTTAGG 59 NA Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 3 2 2 108 X 15200610 15204426 CATCTGGAGAACATGGAGG 57 15204496 15204516 CAAAGTAGGGAATGTCTTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110969 2 1 3 197 X 14968147 14968165 GTCGTCAAGTTCAAGGCAG 59 14966999 14967989 AACATTATCTTCCTCGACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 2 2 4 99 X 14726895 14726913 AAATCCAGAGACAACAGCC 57 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 3 2 2 134 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100682 14100701 TTATTGATACGCAGCTCCCA 59 NA Drosophila melanogaster 61 Ste:CG33236 FBgn0053236 FBtr0300085 3 1 1 110 X 13954939 13954957 TCTGATACACAGCTGGACG 59 13954787 13954865 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ste:CG33241 FBgn0053241 FBtr0300090 1 1 1 110 X 13948594 13948612 TCTGATACACAGCTGGACG 59 13948442 13948520 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Clic FBgn0030529 FBtr0073835 3 1 1 80 X 13708914 13715973 AGAATTGATCATAAAGGCCTCG 58 13708855 13708874 AGGTCCATGAAGTACTCCTG 58 NA Drosophila melanogaster 61 CG11134 FBgn0030518 FBtr0073818 2 1 1 101 X 13632395 13632479 GAGCATTAAGTACAACGATGAG 57 13632541 13632559 TCCTTGCCGGTTATATCCT 57 NA Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 3 2 2 80 X 13608755 13608862 TCAGATTACTCAAGCGACGA 59 13608904 13608923 CAGATCGGATGTCGTTATCG 58 NA Drosophila melanogaster 61 CG32641 FBgn0052641 FBtr0073729 1 1 1 60 X 13078522 13078541 AACTTGTTGAACTTCGTGTG 57 13078613 13078635 CCAGGATCATATAGTAGTCCTCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32645 FBgn0052645 FBtr0073725 3 1 1 89 X 13045863 13045882 ACCATGGATCACATCACCTG 59 13045934 13046135 GAGCATGCACATCTCATCG 59 NA Drosophila melanogaster 61 mRpL49 FBgn0030433 FBtr0073691 1 1 1 163 X 12801267 12801349 AGCTAAGCCAGCTTACCAG 59 12801476 12801494 TACTGTCTTCGCTGGTAGC 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 3 4 4 98 X 11910744 11910819 GTTAATCCCAACACTGGCA 58 11910880 11910899 GTACAGGATGTCCAAGTTGG 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 inaF-D FBgn0260812 FBtr0301267 1 1 1 136 X 11622660 11622678 ACATCTTCATCTGGGACCC 58 11621318 11621336 GTGCTTGTAGAACTGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 FucT6 FBgn0030327 FBtr0073620 2 1 1 80 X 11601668 11601751 ATTGTTGGCGTTCATGTCC 59 11601606 11601628 ATAGGTCATATACTCCTCCACAC 58 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732,FBtr0073547,FBtr0300733 1 4 4 80 X 11329630 11329649 TCAAATTCACCGAGCAAAGC 59 11329502 11329588 GCATTTCCGAGTTCTTGGTC 59 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 3 2 2 151 X 10842532 10842550 AATCCAGAGTGCAGTCACC 59 10842665 10854647 CCTTCGATTGTGACTTGCG 59 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 3 2 2 109 X 10674143 10674237 ACAAATCGGTATTCCTCGG 57 10674052 10674070 AACGAAGCACAGAGATGTG 58 NA Drosophila melanogaster 61 CG32679 FBgn0052679 FBtr0071469 1 1 1 80 X 10260860 10260878 TGGAGGACTATCAGATGCG 58 10260743 10260761 AACCCACTCGGTTATTTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0071487 1 1 2 135 X 10101698 10102018 GTCACAAGAAAGAGGACCA 57 10101581 10101600 GTAGATAGGCCTGAAACGTC 57 NA InUTR Drosophila melanogaster 61 CG2972 FBgn0030177 FBtr0071430 3 1 1 131 X 9977352 9977429 GAATGAATACGCGGAGCAG 59 9977524 9977542 TTAATGCTCTCCGGACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10970 FBgn0030078 FBtr0071356 1 1 1 70 X 8963948 8963966 TCGGAGGAGAAGTTCAAGG 58 8963896 8963916 AGGATGAGCTTCTTAAAGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppt1 FBgn0030057 FBtr0071225 3 1 1 81 X 8583042 8583061 TCAATACTACACCACTGGGC 59 8582921 8582998 CTTGTCCAGTCCCAGATCC 59 NA Drosophila melanogaster 61 nAcRalpha-7E FBgn0015519 FBtr0289988 3 1 1 80 X 8180252 8180363 TCAGCGAGATGATCAAATCCT 59 8180192 8180210 GCGGTGGTATTTGATCCCT 59 NA Drosophila melanogaster 61 CG15336 FBgn0030009 FBtr0301688 1 1 1 60 X 8042079 8042098 ATAATCGGCGACTTATGTGC 58 8042120 8042139 TGCAGATTCCAATAGATGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS14b FBgn0004404 FBtr0071096 1 1 1 126 X 7829360 7829378 TCCATGTCACGGATCTGTC 59 7829468 7829545 TTCTCAGCCACATCCTGAG 59 NA Nonspecific Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300900 2 1 4 96 X 7787510 7787628 TTTATTACACCTATGGGCAGTG 58 7787435 7787453 CGTAAATCGATCCGACTGC 58 NA InUTR Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 2 1 1 126 X 7769709 7769823 AAATGATGGTCGATGGCGA 59 7769913 7769931 CCACTCGGAACTACAAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299793,FBtr0299795,FBtr0299794,FBtr0300526,FBtr0299791 1 6 6 80 X 6678710 6678728 CATTGAGCAGCATCGTCAC 59 6678579 6678668 GGCATAATGTTCATGGTCTGG 59 NA Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870 1 1 2 153 X 6170458 6170476 GAATCCCTGGTGGATGAGG 59 6169193 6170268 CATGACGGCAGCTAATTGG 59 NA Drosophila melanogaster 61 sqh FBgn0003514 FBtr0070877 1 1 1 93 X 6117680 6117698 GAGGAGAATATGGGCGTCC 59 6117532 6117623 ACATCTCGTCCACATCCTC 58 NA Drosophila melanogaster 61 Btd FBgn0029848 FBtr0070878 3 1 1 182 X 6113109 6113280 CAGTTCGCATCAGCTTTCC 59 6112945 6112965 CTATTGAGTATGTGCTCGGGA 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 1 2 2 94 X 5808679 5808697 TGAGAACTTCACCTCGGTG 59 5808426 5808621 CACCGTAGTACCTCTTGCC 59 NA Drosophila melanogaster 61 CG11436 FBgn0029713 FBtr0070699 3 1 1 60 X 4445761 4445779 GCAATCATTGGGTTCTTCG 57 4445719 4445738 ATGTGGAATGGAGAGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL33 FBgn0040907 FBtr0070655 3 1 1 85 X 4216017 4216037 CAGTGGACATCAGTTTAATGC 57 4215889 4215971 TTTCCTGTTGAATGTACGGA 57 NA Drosophila melanogaster 61 lva FBgn0029688 FBtr0070626 2 1 1 80 X 3858651 3858669 CGACGATCACGAATATGGC 59 3858520 3858609 GCGGATACATTCTGTAACGAG 59 NA Drosophila melanogaster 61 CG16782 FBgn0029659 FBtr0070531 1 1 1 146 X 3354061 3354080 GCGTATCAAGCTAGATTGCT 58 3353864 3353883 GAGAACAACATTGAGCACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sgs4 FBgn0003374 FBtr0070524 2 1 1 63 X 3144803 3144822 TTTGAAGGACCTGCTAACAC 58 3144848 3144866 CTTGCACGAAGCTTGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 3 4 4 180 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816602 2816620 TGGTTGAATCCAGGTCCAC 59 NA Drosophila melanogaster 61 CG2709 FBgn0024977 FBtr0070486 2 1 1 205 X 2621216 2621235 CTACATTAAGGCGGAAGTCG 58 2621467 2621485 TGAAGCTGGTGATTTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0070441 3 1 2 125 X 2499676 2499755 AAGTGCTCAGGACTTTGTC 57 2499843 2499862 TCATTGATGTAGGTGTGCAG 58 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440 2 1 2 109 X 2486374 2489773 CGATTATGAAATGTCTGACCAGG 59 2489842 2489860 TTCCTCTTCAGCTGTTGGT 58 NA InUTR Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 3 2 2 106 X 2342606 2342624 TGGGACAAGATCGTCAAGG 59 2342694 2342833 TACTGTTTGCGGAGTCTGG 59 NA Drosophila melanogaster 61 mRpL14 FBgn0040389 FBtr0070405 2 1 1 60 X 2238397 2238417 ATTTGGGAAAGAAAGCGATGG 59 2238357 2238377 TTGTTGTAGACATGGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3621 FBgn0025839 FBtr0070386 2 1 1 128 X 2066705 2066723 TTTAATCCAGCGCATTCGG 59 2066915 2066933 GAGAGTAGATGCGATGGAC 57 NA DesignNoJunction Drosophila melanogaster 61 Hr4 FBgn0023546 FBtr0100515 3 1 1 88 X 1896113 1896131 GATCACCATCATGTTCCGG 58 1896180 1896276 GTTCCACTTCTTTGTTTAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 3 2 2 67 X 1795034 1795103 TAGAAGGCACACTCCTGAC 58 1794985 1795005 CATTATGACTAGTCCTCCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 1 1 1 80 X 925026 925103 AAGGCTATCATGCACATGG 58 925147 925165 ATTCACTCCGGGAATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 mus81 FBgn0040347 FBtr0070170 3 1 1 60 X 835392 835410 CGAGACTGTTCCATTCTGC 58 835434 835452 GTTCCTCGTCGATTAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11663 FBgn0029539 FBtr0070164 1 1 1 160 X 788543 788649 AATCCTACACTATGGCAAATCC 58 788770 788788 TATCTGGGTTTGCATCTGC 57 NA InUTR Drosophila melanogaster 61 tw FBgn0086368 FBtr0070139 1 1 1 80 X 679035 679128 AAGAGGCCAATTGGAACTG 58 679172 679190 CGGTGACCTTATAGAAGCG 57 NA Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0112928 2 1 2 89 X 672169 672187 GATGACGTTTCCATCGTGG 59 672240 675523 CACCAGTTTGGCAATCTGG 59 NA Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070092 2 1 2 83 X 387426 387444 CTAGTGCGATTGATCGGAG 57 386602 386621 GATGAAGAGCTTGGTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947,FBtr0070076 1 2 2 260 X 371713 371731 ATTGGTACAAGGCCAGGAG 59 371952 372054 CGATTACCAAATAAAGTCACGC 58 NA DesignRelaxed Drosophila melanogaster 61 Cyp4g1 FBgn0010019 FBtr0070099 1 1 1 60 X 362456 362477 TGAACATCATCTTGGGTATGAC 58 362417 362437 TCTTGGAAGTTCTCCTTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40948 FBgn0085541 FBtr0302240 1 1 1 60 U 8664463 8664485 GATACTAGACACATGGAACAAGG 58 8664425 8664446 CTCCGATGTCTTGAATAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SteXh:CG42398 FBgn0259817 FBtr0300105 2 1 1 110 U 6622022 6622040 TCTGATACACAGCTGGACG 59 6622114 6622192 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG40992 FBgn0085550 FBtr0302343 2 1 1 60 U 5052389 5052408 TACTTACACGAGTTCGACTG 57 5052348 5052366 CCTTGAATTTGTCGAAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gpa2 FBgn0261386 FBtr0113763 1 1 1 60 U 2295932 2295951 CAACTGCTGGTGCTTATCTG 59 2295891 2295913 CCTTTCCCATTGAGTTACTATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32010 FBgn0052010 FBtr0089181 2 1 1 60 4 45006 45026 TATACAAGTGTGACGTGTTGG 58 44889 44987 GATCCTGAGAAACTGCAATCAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33978 FBgn0053978 FBtr0100021 1 1 1 83 4 185015 185101 TCACTTTCTCAAAGACTCCAG 57 184952 184971 ACTGTCCTCGATCAATTGTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 lox FBgn0039848 FBtr0085810 1 1 1 100 3R 27284645 27284663 CTGATGGACAGTGAATGCC 58 27284508 27284526 ACATCGGTGTAGGTGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 bnk FBgn0004389 FBtr0085754 3 1 1 60 3R 27019569 27019587 TTTGAGTCGGGTTTCAGCA 59 27019610 27019629 CTATGAAGCGGTTGTTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33920 FBgn0053920 FBtr0091924 2 1 1 82 3R 26870379 26870397 AACCCGATAGCCAGTTACC 59 26870258 26870333 ACGAGATCGTGATCGTAGG 58 NA Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750 1 1 2 220 3R 26789701 26789719 GACTCTTTCTTGCCTGCTG 58 26789403 26789517 CATGATGGTGAGTGTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15544 FBgn0039804 FBtr0085708 3 1 1 81 3R 26665684 26665703 ACAACGTCAGCATTCATCAC 59 26665742 26666180 ACACTTGACTAGATCTCTATTGGG 59 NA Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085701 3 1 2 212 3R 26599451 26599719 AGTATCAGTCCCTCAGCGA 59 26599895 26599913 TGTTGTTCATGGACTGGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG34300 FBgn0085329 FBtr0112496 1 1 1 122 3R 26132331 26132349 GAACCTGGCTCAAATCCTG 58 26132138 26132246 CTAACAGACGACCATCTTCG 58 NA Drosophila melanogaster 61 Cad99C FBgn0039709 FBtr0085488 2 1 1 85 3R 25678841 25678924 CGTTCACAAGGTCAAAGCC 59 25678967 25678991 GGATGAGTATAACAAGTGATATGGC 59 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 2 2 2 100 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628321 25628340 GATTCATCGAGTGCTTCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 1 1 1 182 3R 24973600 24973688 AAGACGTCTTTGTGAAGCC 58 24973436 24973454 GTCCAATGAACAGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14529 FBgn0039609 FBtr0085328 3 1 1 60 3R 24699160 24699180 CTCTACTGGGTGTCTATGTGG 59 24699200 24699220 AACTGTAGGCGTTTAATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4884 FBgn0039565 FBtr0085264 3 1 1 143 3R 23783458 23783538 TGGCGAGAAACAAAGTGGA 59 23783281 23783301 GATGGGAAGGATTCGATTGAC 58 NA Drosophila melanogaster 61 CG5527 FBgn0039564 FBtr0085255 2 1 1 60 3R 23781868 23781886 TTCAACAGGCTCTACATGG 57 23781974 23781992 TGTCAGAGATCTCCGAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12259 FBgn0039557 FBtr0085270 1 1 1 60 3R 23746105 23746123 AGAATGGGTAATGCAGCAG 57 23746063 23746081 GTAGCTGAACGTGATGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS22 FBgn0039555 FBtr0085247 1 1 1 60 3R 23743101 23743120 CTCCAAGTTCGTATTCACGG 58 23743143 23743161 GATTACCTTGCGTTCCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5003 FBgn0039554 FBtr0085272 1 1 1 80 3R 23741264 23741341 GATCTAGAGGATCTCAGTATTGAGG 59 23741208 23741228 CAAGGAAGGTAACTTCGACAG 58 NA Drosophila melanogaster 61 dsd FBgn0039528 FBtr0301390 3 1 1 183 3R 23428663 23428749 CTCGGATAGCGATGAGGTG 59 23428170 23428188 GAAGCCCTCGTAACAGGAG 59 NA Drosophila melanogaster 61 CG5402 FBgn0039521 FBtr0085213 1 1 1 156 3R 23328433 23328453 GGTTAAAGTAGCTGTTGACGT 58 23328045 23328064 CGATGGCAAACTAGACTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 2 2 2 81 3R 22796475 22796493 TCCCTAAGTCGCATCATGG 59 22796534 22796615 GTAAGAAGTATCTGACACCTTCG 58 NA Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095 1 1 2 94 3R 22692369 22692508 AGCTGTCTATCCTGTCACTC 58 22692294 22692312 AAATTCCGCTCGAAATGCC 59 NA InUTR Drosophila melanogaster 61 TwdlQ FBgn0039448 FBtr0085049 3 1 1 231 3R 22519067 22519242 CGAGGATTTCTGTTACTCTTACTC 58 22518859 22518878 ACTCCTTGCTGAACTCATCC 59 NA DesignRelaxed Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641,FBtr0084953,FBtr0084952 2 3 3 80 3R 21810724 21810744 AAGGTTTGCCTGAATTTGTCC 59 21810783 21810865 GTATATGTGAGCCAACCTTAGC 59 NA Drosophila melanogaster 61 Mst57Dc FBgn0011670 FBtr0084916 1 1 1 60 3R 21655342 21655360 TGGGATCTAACGGTGTGAC 59 21655300 21655318 TGCATATTTCTTTCGGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084884,FBtr0084885 3 2 2 60 3R 21444520 21444540 TGTCTATTGAAGAAGCACCCA 59 21444562 21444580 TCCACGTTGATGTCTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 2 2 2 133 3R 21425812 21425830 CCCTCATATCACAGAACCC 57 21425927 21426004 GTAGGGTGCATATCTGACG 57 NA Drosophila melanogaster 61 CG10553 FBgn0039324 FBtr0084853 2 1 1 97 3R 21142518 21142595 GTGGATGGTCGTTCATCTG 58 21142439 21142457 GTCGTCATCACCAAGAACC 58 NA Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 3 2 2 84 3R 20771732 20771751 TTTGGTAGTTATCACCCGGG 59 20771795 20771874 AATGTTGCTCTGATACTTGGTC 58 NA Drosophila melanogaster 61 CG31381 FBgn0043799 FBtr0084711 2 1 1 60 3R 20704206 20704224 AGGCTTGCGAGATACTACC 59 20704248 20704266 TCCTCATCCAAATCCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 niki FBgn0045980 FBtr0084737 1 1 1 95 3R 20649804 20649879 GAACAAAGGGTACTCCTATGAG 58 20649730 20649748 ATGGACACATTGCTGTAGG 57 NA Drosophila melanogaster 61 CG34150 FBgn0083986 FBtr0301004 3 1 1 128 3R 20640182 20640200 CGTAATGAAAGCAGCGAGG 59 20640347 20640433 CGTGATCCTTAGTTCATAAACACC 59 NA Drosophila melanogaster 61 tld FBgn0003719 FBtr0084691 1 1 1 80 3R 20577194 20577264 GAGATTCGAGGTGGTATGTG 57 20577304 20577325 TAGTCCATAGGATAGTTGGGAG 58 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0084659 2 1 3 96 3R 20477269 20477288 CTTCAGTTCCATTGTGACCG 59 20477347 20477595 TTGGAGAGGGAAGACTCCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666,FBtr0084667 2 3 3 80 3R 20468071 20468142 TGCTACGAGTACGAACTGG 59 20468009 20468033 CTCCTTTATAAAGCTGTAGTAGTGG 59 NA Drosophila melanogaster 61 CG33339 FBgn0053339 FBtr0084610 1 1 1 114 3R 20188585 20188665 AATTGTGCTGACAGTTCCC 58 20188739 20188761 GAAGTCTAGAACATTGTAGGGAC 58 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530,FBtr0084602 1 2 2 80 3R 20116547 20116567 GAGAACTGTTCCACATGAAGC 59 20116607 20116684 CATTGATATCACGTGGCACTC 59 NA Drosophila melanogaster 61 CG6178 FBgn0039156 FBtr0084550 1 1 1 109 3R 19979390 19979409 AGGACGTGTCTCTTATTGTG 57 19979481 19979555 AGTGGGTTGGATTTGTGAG 57 NA Drosophila melanogaster 61 CG5463 FBgn0039153 FBtr0084584 2 1 1 80 3R 19954334 19954416 GGAGGATTGCTCCATTAAGG 58 19954273 19954292 GCTGCCTGGAGATTTATCAG 58 NA Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 1 1 1 88 3R 19874145 19874221 AAACAAACCTGCAACCAGG 59 19874273 19874291 AACGCAGTGAACATCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 ATPsyn-Cf6 FBgn0016119 FBtr0084432 2 1 1 165 3R 19181357 19181375 GAGTACAAGCAGAAGAGCG 58 19181146 19181164 GATCGACCTTAACATCGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7023 FBgn0039025 FBtr0084311 3 1 1 298 3R 18592426 18592445 CCATCAAGGAAACTTCACAC 57 18600728 18600746 AAGTAGTGCTCATTCGGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6985 FBgn0039017 FBtr0084308 3 1 1 87 3R 18568398 18568417 GTTCTATGGGCATATGGGTG 58 18568464 18568544 CGCTAGATTATTAGATGCGGTC 59 NA Drosophila melanogaster 61 CG33721 FBgn0053721 FBtr0091718 2 1 1 80 3R 18157291 18157373 AAATGTCCCTATGATCACGAC 58 18157413 18157433 TGGAAGGATGTTGGTAAAGTG 58 NA Drosophila melanogaster 61 Ir94c FBgn0051423 FBtr0084248 2 1 1 119 3R 17945107 17945530 CTGGATTGGAAGCAAGAACC 59 17945007 17945025 TGGCAGTATTCATCCCGAC 59 NA Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 2 2 2 111 3R 17854854 17854941 GTGATGTCTGGTTCAATGCTC 59 17855014 17855032 TAGATGCCCTGGTTGATGC 59 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263,FBtr0084155 1 2 3 104 3R 17693455 17693538 ATTCTCAGCAACTTTGTGCT 58 17693370 17693391 GCGGTTCTCATTTAGAATTTCG 58 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162,FBtr0301327 3 6 6 80 3R 17612578 17612665 AGAACATAGCAGATTACGACG 58 17612518 17612537 AGAAGTGACCGTATAGCTGG 59 NA Drosophila melanogaster 61 slou FBgn0002941 FBtr0084123 2 1 1 136 3R 17380363 17380381 GGATCCGAACAAGTTCACG 59 17375453 17380264 AATCCTGGGCAGACATATCC 59 NA Drosophila melanogaster 61 slou FBgn0002941 FBtr0084123 1 1 1 135 3R 17380362 17380380 GATCCGAACAAGTTCACGG 59 17375453 17380264 AATCCTGGGCAGACATATCC 59 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 3 2 2 95 3R 17231524 17231542 GTGTTCACCCAGAACTGTC 58 17231598 17231708 AACCAAATCCTTGAAGACAGAG 58 NA Drosophila melanogaster 61 AP-2sigma FBgn0043012 FBtr0084103 2 1 1 111 3R 17095401 17095479 CAACTTTGTGGAGTTCCGC 59 17095308 17095326 AATGGCCTCCAGATAGCAC 59 NA Drosophila melanogaster 61 CG10830 FBgn0038839 FBtr0083986 2 1 1 69 3R 16722516 16722534 ATCACCATCGGTTACCGTG 59 16722465 16722483 GCTTCCGGAACTTAACGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31205 FBgn0051205 FBtr0300451 3 1 1 92 3R 16557427 16557505 TTTACATCCAACAATCCAAGCC 59 16557557 16557576 GGCTCCGCAATGATATTGTC 59 NA Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 3 2 2 83 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401268 16401287 GATAAGATTTCCGTGACGCA 58 NA Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 1 2 2 80 3R 16326653 16326671 CCTGCAGATCTGATCAACG 58 16326274 16326610 TATGGCGTGCTTATAGTTGC 58 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 3 2 2 80 3R 15708481 15708568 GATGACGCTAATATCGAGTACG 58 15708608 15708627 GGTGCCATAAGTACCTTTGC 59 NA Drosophila melanogaster 61 Naam FBgn0051216 FBtr0083786 1 1 1 80 3R 15522365 15523039 AGCAAGGACACGAGATACTG 59 15523080 15523100 AGTCCAATGAGTAGAAGACGG 59 NA Drosophila melanogaster 61 Vha13 FBgn0026753 FBtr0083804 2 1 1 166 3R 15470066 15470084 GTGATTCTGTCGCACTTGC 59 15469551 15469936 CTTGCCTTGCGTTTACGAG 59 NA InUTR Drosophila melanogaster 61 CG42613 FBgn0261262 FBtr0302093 1 1 1 80 3R 14773667 14773688 AGTTTGCACGCTCTATATTTCC 59 14773727 14795158 CGAATGTCTGATCACACTCTG 58 NA Drosophila melanogaster 61 CG7691 FBgn0038626 FBtr0083631 2 1 1 84 3R 14386742 14386838 TCGGATAGGTCCAATCTGC 59 14386885 14386904 AATACTTGCCACACTGTCCA 59 NA Drosophila melanogaster 61 CG18598 FBgn0038589 FBtr0083569 2 1 1 106 3R 14076906 14076924 ACAACTACAAGGCCTGGTC 59 14076994 14077077 CTTTAGCAGGGACTCCTCG 59 NA Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083607,FBtr0083606 3 2 2 123 3R 14067614 14067694 CACCTCGATTGTCTTCCCA 59 14067509 14067528 TAGTTGGAGACTCTTGTGGC 59 NA Drosophila melanogaster 61 CG7175 FBgn0038584 FBtr0083609 2 1 1 109 3R 14049039 14049057 GAAGGAGGATCTCAAGCCA 58 14048896 14048968 AACGATAGGAACTACCCAGAG 58 NA Drosophila melanogaster 61 CG31249 FBgn0051249 FBtr0083483 2 1 1 90 3R 13512652 13512670 GAAACTCGAGGTACTGGGT 58 13512522 13512540 CTCCAACCAGAGGACTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33333 FBgn0053333 FBtr0083441 2 1 1 60 3R 13243326 13243345 ATTTCGCAAGGACAACAGTC 59 13243368 13243386 CTTGGTCTTGACCGTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31419 FBgn0051419 FBtr0083433 2 1 1 60 3R 13110932 13110950 AAGAATTACATCCTGCCGG 57 13110974 13110992 TCTCATATGGGCGACACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5285 FBgn0038490 FBtr0083409 3 1 1 118 3R 12976580 12976598 TATATGCATCCCAGCTGCA 59 12976680 12976759 AAAGGGAATTCCGGTTTGG 58 NA Drosophila melanogaster 61 mRpS11 FBgn0038474 FBtr0089894 2 1 1 109 3R 12898897 12898969 ATCACAAAGGAGTCCTCCG 59 12899042 12899060 TCCACTAATGGTAACCGCT 58 NA Drosophila melanogaster 61 CG16941 FBgn0038464 FBtr0083374 1 1 1 93 3R 12825427 12825446 CCCATTGCCAATCTGAAGAC 59 12825296 12825374 TGTCTTTGAAGAACATTCCCTC 58 NA Drosophila melanogaster 61 CG3678 FBgn0038461 FBtr0083376 2 1 1 60 3R 12816556 12816639 AAATACGATACACAATGGGTGG 58 12816517 12816535 TGCGAATAGTAAGTGCGAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14905 FBgn0038452 FBtr0083357 1 1 1 80 3R 12449044 12449135 AGATGAAATAGAGCGCCAG 57 12448982 12449002 GCATTTAGATAGTCAAGTGCC 57 NA Drosophila melanogaster 61 Scp2 FBgn0020907 FBtr0083361 3 1 1 112 3R 12401112 12402658 ACAACGATGGACAGGTCAG 59 12401018 12401040 GTCGAACATGAAGTTCATGTAGG 59 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 3 2 2 153 3R 11189028 11189107 ATGCTACAGGCGAAATCCA 59 11188893 11188911 ATCCTGGAAGTGAACTGGG 59 NA Drosophila melanogaster 61 CG3610 FBgn0038266 FBtr0082994 1 1 1 60 3R 10671511 10671531 GATCTAATGGCCCAGATTACC 58 10671548 10671571 CAGCTATTCGATGATCTTGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14855 FBgn0038260 FBtr0082991 3 1 1 116 3R 10622596 10622685 GAATACAGAGCTAAACTGGGTC 58 10622762 10622780 ATTCGATCACCAAGCAGAC 57 NA Drosophila melanogaster 61 CG31533 FBgn0051533 FBtr0082905 2 1 1 60 3R 9980767 9980785 TCCAGTAGCCCACAATCAC 59 9980725 9980744 CATATACCGATCTCCTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621,FBtr0112624,FBtr0290011,FBtr0112623 3 5 5 91 3R 9585498 9585579 ATCGAAATAACACCAACTGGAG 58 9585631 9585649 AGAACGAACGACATCAGGA 58 NA Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 1 2 2 81 3R 9514942 9514960 ATCGTAGAGTTCTCGCCTC 58 9515005 9515098 TCAGTAGCATACGCTCCAC 59 NA Drosophila melanogaster 61 CG14374 FBgn0040553 FBtr0082761 3 1 1 148 3R 9222801 9222819 CATCTGCTTGACCCTTTGC 59 9222671 9222689 CGTAGGTGGAGTATGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300071,FBtr0300072 1 2 2 80 3R 8869503 8869525 TCGTAAACACTATCGCTACTACC 59 8869560 8869652 GTATAAACACCTGGAAGTTCACTG 59 NA Drosophila melanogaster 61 CG11668 FBgn0038113 FBtr0082705 2 1 1 159 3R 8865318 8865401 GACAAACCAAGTTCGCTGG 59 8865523 8865542 ATATTGCCGGAGTAGTCTCC 58 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0113229 1 2 3 168 3R 8855868 8855953 TTTGCAGAGATTCTTCGCC 58 8855718 8855736 ATGCTGTTTCTCTTGTCCG 58 NA InUTR Drosophila melanogaster 61 CG14383 FBgn0038102 FBtr0082724 3 1 1 60 3R 8813858 8813879 AAGTTTGAATGAGGAGGAACAG 58 8813819 8813839 ATTGGCCTCCACTATATTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14384 FBgn0038097 FBtr0082731 1 1 1 191 3R 8792187 8792282 TTAAACATTACCAGGTCCGC 58 8792015 8792033 CACTTCTTGGCGAATCTGG 58 NA Drosophila melanogaster 61 Cyp304a1 FBgn0038095 FBtr0082691 1 1 1 214 3R 8790893 8790911 TATATCCGGCAGTTCTGCG 59 8791088 8791173 AATGGTGTCCTTGGGTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31345 FBgn0051345 FBtr0082689 1 1 1 87 3R 8637489 8637680 GTTCTCCAGATTCGACACAG 58 8637361 8637381 ACGCGAATTATTCATAGGAGG 58 NA Drosophila melanogaster 61 CG18549 FBgn0038053 FBtr0082632 2 1 1 106 3R 8280439 8280457 TCTACCTGTTCTTCTCGCT 57 8280525 8280616 CATGAAGGCTGTATAGGTCAG 58 NA Drosophila melanogaster 61 CG18549 FBgn0038053 FBtr0082632 1 1 1 106 3R 8280438 8280458 ATCTACCTGTTCTTCTCGCTC 59 8280523 8280615 ATGAAGGCTGTATAGGTCAGTG 59 NA Drosophila melanogaster 61 desat2 FBgn0043043 FBtr0082592 2 1 1 81 3R 8263088 8263177 ATACGACAAGACCATGAATCC 58 8263220 8263238 GTGATGGTAGTTGTGCCAC 58 NA Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 3 2 2 80 3R 8180556 8180650 TTGGATATAGCATCCCTTGGAC 59 8180497 8180517 AATAGGCTGGTCATTTACCCA 59 NA Drosophila melanogaster 61 CG4702 FBgn0037992 FBtr0082550 1 1 1 80 3R 7949093 7949195 TATCTCCATGGGTCTTCGC 59 7949031 7949049 CCGTTGTCGACCTTATCGA 59 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100323 2 1 3 298 3R 7390433 7392657 AGTACATGAAGGAGCTGGG 58 7386919 7390172 GGGAATTAGGGTGATCAGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 2 7 7 98 3R 6692601 6692620 TTACGGTGAACAAGGAGGAG 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 tomboy20 FBgn0037828 FBtr0082316 2 1 1 60 3R 6561328 6561346 GAGACCCTGATCACAAACG 58 6561286 6561307 GTATCGCGTTGATTAGATGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 1 2 2 104 3R 5988995 5989013 TCCTGTCTAATGCAGCCAC 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 2 3 5 82 3R 5701879 5701897 CGATGTCGTCAAACACGAC 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 CG9459 FBgn0037764 FBtr0082153 2 1 1 67 3R 5643887 5643906 CTACAACATCGTGCAAATCG 58 5643772 5643790 GACCAAGCATGAAGTGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8417 FBgn0037744 FBtr0082131 1 1 1 110 3R 5586106 5586124 GGAAAGCGTTAAGTTGTGC 57 5586198 5586269 TCGTTGGATTTCAGTTCGT 57 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 3 3 4 219 3R 5521238 5521319 CAAATCGGAGGCTTCTGTG 58 5521037 5521056 ACGGTAGTTTGTGATTAGCA 57 NA DesignRelaxed Drosophila melanogaster 61 Crc FBgn0005585 FBtr0082103 2 1 1 97 3R 5456238 5456258 TGGATCTACAGCAAACATCCT 59 5455893 5456179 GTCTGAATGCCTTTGTCGG 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117,FBtr0082118 1 3 3 82 3R 5367294 5367414 GGAACTTGAATAACCACTTTGG 57 5367233 5367252 GTTGTACGAAGAACCCTCAG 58 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091945 3 1 4 162 3R 5182385 5182577 AGCATCAATGGTATAGCCG 57 5182703 5182721 GCAGCGCTGTTATTAATGC 58 NA Drosophila melanogaster 61 CG11977 FBgn0037650 FBtr0300742 1 1 1 80 3R 4823473 4823491 GGGCCATACTGTATTCCGA 59 4823534 4823615 TAATCGGGTGGCTTTACTGG 59 NA Drosophila melanogaster 61 Cenp-C FBgn0086697 FBtr0089973 2 1 1 80 3R 4393442 4393532 ACTAAATACTACCGGTATTCGG 57 4393573 4393591 CTAGGATCCATGGTGTGAC 57 NA Drosophila melanogaster 61 CG11737 FBgn0037592 FBtr0081869 1 1 1 80 3R 4346261 4346336 TTCTCTATAAGTCGGTGTCCTG 59 4346377 4346395 TTAACGACGCTGGAATTGC 59 NA Drosophila melanogaster 61 Atg13 FBgn0261108 FBtr0081843 3 1 1 60 3R 4176358 4176376 ACAGGATCTACGTGGACAG 58 4176400 4176418 TTTACGTGCTTGTGACCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or85a FBgn0037576 FBtr0081836 3 1 1 84 3R 4148572 4148592 CATTCACAATGTTCAGCAGTC 58 4148635 4148710 CTTGGCCATCTTTATATTGGTG 57 NA Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 1 2 2 82 3R 4060875 4060893 TAAGCCAATATCCGTGCGT 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA Drosophila melanogaster 61 Gie FBgn0037551 FBtr0081794 2 1 1 80 3R 3954084 3954102 GTGCTGGGCAATAAACGAG 59 3954141 3954230 CTGTATGCTCGATAGATTCATTCG 59 NA Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571,FBtr0081570 3 2 2 153 3R 3001102 3003935 ACAACAAGAGCTATAAGCACG 58 3004050 3004068 TCCAGACAGTTGGGATTGG 59 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081635 2 1 3 80 3R 2900624 2900642 TTCCGCATCTCTTATTCGC 58 2900685 2902620 TTTCAGTGACTTGGAAGGAC 57 NA InUTR Drosophila melanogaster 61 Ccp84Aa FBgn0004783 FBtr0081691 3 1 1 84 3R 2529806 2529824 ATCATTCAGCCATCAGCAC 58 2529871 2529945 CGAAGACAAACTTGAATGCC 58 NA InUTR Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 2 2 2 89 3R 2199081 2199099 AACGTCTGAGCGAATCCTC 59 2198945 2199031 AAGGAGTTCTTGGTCAAATTCC 59 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 1 2 2 81 3R 1493659 1493739 TTCGAAGGATATGTTCAGTTCG 58 1493599 1493617 TTCGGACCAACTTATTGCC 58 NA Drosophila melanogaster 61 RpL13A FBgn0037351 FBtr0078705 3 1 1 153 3R 1450229 1450616 GTTTAACGAACAGGACCGT 58 1450730 1450751 ATCTTGTTCCTGTAGAAGTGTC 57 NA Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0113194 1 1 2 137 3R 1448402 1449507 CACCTTATAAGATGCCCGAC 58 1448284 1448302 GATTTGGGTCATCGAGCTG 58 NA InUTR Drosophila melanogaster 61 CG14671 FBgn0037340 FBtr0078754 2 1 1 94 3R 1390055 1390138 CATTGGTTCTCGGTACTGC 58 1389979 1389997 TGCAGATTAGTGCTCTCGG 59 NA Drosophila melanogaster 61 mRpL44 FBgn0037330 FBtr0078768 3 1 1 137 3R 1296279 1296297 TCATTCTTACGCAGTGCTG 58 1296108 1296126 TAGTTTCTTCTGCCGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31530 FBgn0051530 FBtr0078882 2 1 1 115 3R 583353 583371 CAGTACGACTTGGTCTGCT 59 578908 583277 GGACTGAAATATTTCAGCAGCT 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 10 10 80 3R 562838 562911 AAATGAAGTAACGAGGTCCGA 59 562778 562796 ATACGCTTGATCAGAGCCT 58 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 2 2 2 91 3R 163946 163965 GGGTGAATTCAACTTCGGAC 59 164016 164777 CAAAGGTATACACATCAACCGA 58 NA Drosophila melanogaster 61 snoRNA:U49:66Da FBgn0060292 FBtr0076634 1 1 1 60 3L 8594591 8594611 GTCTTCTTGATAGGAAGTGCC 58 8594630 8594651 GCTTTCAGAGGGTTAAACTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17454 FBgn0039977 FBtr0299868 2 1 1 109 3L 23708255 23709008 CAATTGCAACAAGTGGAGG 57 23709078 23709099 TGTATCAAATCACGAGTAAGGG 58 NA Drosophila melanogaster 61 CG32350 FBgn0052350 FBtr0070046 3 1 1 60 3L 23142733 23142754 ATGATTCAATGTTGGTTGTGGG 59 23142694 23142712 CTTCCCTCAGGAGTGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 laza FBgn0037163 FBtr0078508 2 1 1 60 3L 22453596 22453617 CATACGGTATCCCTACAAGGAC 59 22453557 22453575 GAGCATCATGAGCAGTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 laza FBgn0037163 FBtr0078508 1 1 1 60 3L 22453604 22453622 CTGAGCATACGGTATCCCT 58 22453562 22453580 TCATGAGCAGTAGCATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 3 1 1 150 3L 22253461 22253729 GAACAGGTCCCAAACACCT 59 22253329 22253348 GCAGTATTGGAAGCCATACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10510 FBgn0037059 FBtr0078310 3 1 1 81 3L 21201947 21201965 AGATGGATCGCGAGATCAC 59 21201829 21201902 TGCTTCTCCATTTGCTTGG 58 NA Drosophila melanogaster 61 Mst77F FBgn0086915 FBtr0078270 2 1 1 104 3L 20810624 20810705 TATTCTGCGGAACCATTGGA 59 20810539 20810558 GCCACTTATTTCAGAGTGCA 58 NA Drosophila melanogaster 61 CG4186 FBgn0040634 FBtr0078246 2 1 1 179 3L 20762776 20762847 CTGCCTAAAGGAACAGGAG 57 20763046 20763064 CCATCGCGTTCTTCTAAGG 58 NA Drosophila melanogaster 61 CG5932 FBgn0036996 FBtr0078196 1 1 1 66 3L 20454603 20454736 TTAATGCCAATGCGAGCTC 59 20454766 20454784 TGGTTGCTAGAGGATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5585 FBgn0036973 FBtr0078242 1 1 1 80 3L 20340762 20340782 CATTGCCAAGATTATTTCGGC 58 20340648 20340722 GCTGAAAGTAACTTGTGACCA 58 NA Drosophila melanogaster 61 CG14183 FBgn0036931 FBtr0074907 2 1 1 80 3L 20019233 20019251 GAATGGGTTACTGAGGAGC 57 20019123 20019192 ATACTCAACCCTCATGTATTCG 57 NA Drosophila melanogaster 61 kto FBgn0001324 FBtr0074884 3 1 1 80 3L 19836590 19836673 GAACATGCAGTCAAATCGCA 59 19836716 19836734 CGTTGTCGTAGCATCTGTG 59 NA Drosophila melanogaster 61 Cpr76Bc FBgn0036880 FBtr0113180 3 1 1 116 3L 19516468 19519131 CCCGCATTATGAGCATCAG 58 19519211 19519229 CTGTAGTGACCCTTGACCC 59 NA Drosophila melanogaster 61 CG3797 FBgn0036842 FBtr0075037 3 1 1 165 3L 19055233 19055251 GTGATGGAAAGGTTCACCC 58 19055019 19055105 CATAGTAGAAGGCCAAGCCT 59 NA Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075056 2 1 2 63 3L 18814300 18814319 CAATTGGCTTCATGTTTCGT 57 18814345 18814420 TCAATGGAGGCCATACTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG32201 FBgn0052201 FBtr0300051 2 1 1 81 3L 18603068 18603086 TTTCACTGCTAAGACGCAC 58 18603128 18603346 CTCTGATTTCCTTCTCCAATGG 58 NA Drosophila melanogaster 61 CG13700 FBgn0036785 FBtr0299605 2 1 1 80 3L 18293980 18294000 ACTTACTTCTGAGGCAGATCC 59 18293860 18293940 ATGCGAAACTCTGAGTAACGA 59 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 1 1 1 93 3L 18286583 18286601 AGGGAAAGGACTTTCTGGG 59 18286444 18286527 ATCTGCAAATGCTTGATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Cyp312a1 FBgn0036778 FBtr0075135 1 1 1 85 3L 18123725 18123745 GTATAAAGGAAACTCTGCGGA 57 18123600 18123681 GAAGAAGTCATTGATTGTGCAG 58 NA Drosophila melanogaster 61 Ir75b FBgn0261402 FBtr0302293 1 1 1 80 3L 17811380 17811467 CCGAACTCATCAAACTAAGTGAG 59 17811322 17811340 TTGTCTCCATCCAAGACCG 59 NA Drosophila melanogaster 61 st FBgn0003515 FBtr0075391 1 1 1 80 3L 16493204 16493223 CTCTCATGGATGCTGTATGC 58 16493261 16493341 CTCCTGAAAGCAGGTTATATTCTG 59 NA Drosophila melanogaster 61 CG13064 FBgn0040796 FBtr0089378 3 1 1 72 3L 16273791 16273809 ACCTCTCACGAAGATTGCC 59 16273845 16273863 AGGAACATGTTCGTAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5161 FBgn0036573 FBtr0075491 3 1 1 103 3L 16124525 16124603 AACTAAGGAAAGAGGACCACAG 59 16124443 16124461 TTTCAGCTGCATATTGGCC 58 NA Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0075509 2 1 2 80 3L 15948346 15948370 CATATACCTTCTTACGTTCCTAACC 59 15948406 15948504 ATAATGGCATCCCTTAGGTGG 59 NA Drosophila melanogaster 61 CG7579 FBgn0036528 FBtr0075581 1 1 1 80 3L 15676221 15676296 CTATAGGGATCCACAATGTCTC 57 15676162 15676183 TGTTGGATGGCTATAACTATGC 58 NA Drosophila melanogaster 61 CG33985 FBgn0053985 FBtr0100030 3 1 1 93 3L 15519358 15519376 GCACTTCCCATGAGTTGTG 59 15519221 15519301 AAGTCATGGCCAAACACCT 59 NA Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 1 2 2 80 3L 15127565 15128000 CCAACGAAGTGGTTCTCAG 58 15127503 15127521 AAATTGATGATGTCGGCGT 58 NA Drosophila melanogaster 61 CG13460 FBgn0036471 FBtr0114510 1 1 1 60 3L 15054490 15054508 TGTCCAACAACATCTTGCC 58 15054448 15054469 GATCCATAGGATCCATAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13461 FBgn0036468 FBtr0075664 3 1 1 60 3L 15045380 15045401 AGTCAAGATTCTGGAAATGTGG 58 15045341 15045359 CCTCCTGATTATCCTCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ocho FBgn0040296 FBtr0299779 1 1 1 60 3L 14968675 14968694 TCGTTTACAATGAGAACGGA 57 14968715 14968735 ACATAGTAATCCTCCTGGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NHP2 FBgn0029148 FBtr0075698 1 1 1 60 3L 14794962 14794985 ATGGACTTAAGGATGTACAGACTC 59 14794865 14794943 GCAAAGATGCAAATGCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13472 FBgn0036450 FBtr0075691 1 1 1 82 3L 14782306 14782431 ATGGAAGGTATTATGAGGCTG 57 14782475 14782493 CTCATGGTTTCCATAGCCC 58 NA Drosophila melanogaster 61 CG33260 FBgn0053260 FBtr0302436 2 1 1 92 3L 14754813 14754891 CGTGGATGATTACATGGAACTG 59 14754742 14754762 GATTGATTAGGACTCCAGCCT 59 NA Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075724 2 1 2 82 3L 14543149 14543168 ATATTCAGTCACAGTCCACC 57 14540571 14543105 TCGTCATTGTAGTTCAACGA 57 NA Drosophila melanogaster 61 CG4613 FBgn0036427 FBtr0075725 1 1 1 65 3L 14514395 14514413 TTTCGCGTTAATCGCTGTG 59 14513780 14513801 GAAATTTGGATTCGATGTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34244 FBgn0085273 FBtr0112438 1 1 1 103 3L 14228641 14228719 CCTTCTGGCTTACATCGCT 59 14228556 14228574 TCACATCCGCATAAACCCT 59 NA Drosophila melanogaster 61 CG10752 FBgn0036325 FBtr0075903 2 1 1 110 3L 12947013 12947031 AAGATGGATATCGACGGCG 59 12946733 12946757 CTCATAGTTTGATATTAGCCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ent3 FBgn0036319 FBtr0075935 3 1 1 115 3L 12848009 12848031 CTCTACATACTCTTCAGCTACCT 58 12848106 12848298 TCAATCTCCTGCTCATCCG 59 NA Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0112436,FBtr0300028 1 2 2 85 3L 12527191 12527209 TTCGTTGGATTCGTGTCCT 59 12527257 12527276 TTCTCAGTGTTAACCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5642 FBgn0036258 FBtr0076022 3 1 1 81 3L 12138341 12139066 CAACCAACTCGGATTACTACG 58 12138280 12138298 GCGTAGTAGTTCCTCTCGT 58 NA Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 2 2 2 80 3L 12064091 12064174 TTGTGGCAAGGTGATATACTC 57 12064031 12064049 TTGTCCCTTAGCAACTGAC 57 NA Drosophila melanogaster 61 CG7252 FBgn0036226 FBtr0076041 3 1 1 62 3L 11940816 11940834 GGAAGAATGCGACCAATCG 59 11940920 11940938 AAGACCTCCGATAAGCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 1 1 2 60 3L 11246055 11246817 ATAAAGATTGGACCAGCAGAC 58 11246839 11246857 TTGGACATCAGGTCCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr67Fb FBgn0036110 FBtr0076193 1 1 1 128 3L 10887302 10887384 CGCGCTAATCATTTCCCTG 59 10887476 10887494 TTGGACGTTCCGTATTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 3 1 2 160 3L 10405984 10406062 CCTCCAATACGATTCGTGG 58 10406186 10406204 ATGTGAGTGAGAAGCGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349 1 1 5 104 3L 9965485 9966199 ATTAAACAGCCAGGCTGGT 59 9966267 9966285 AAGTGGTTGCTGATCCTCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ilp5 FBgn0044048 FBtr0076371 2 1 1 82 3L 9816860 9816878 CTTGATGGACATGCTGAGG 58 9816725 9816814 AATCGAATAGGCCCAAGGT 58 NA Drosophila melanogaster 61 SH3PX1 FBgn0040475 FBtr0076413 1 1 1 128 3L 9705243 9706041 AACATATCCGTGTCACGTC 57 9705133 9705151 GAATTGCTCCTCATAGCGG 58 NA Drosophila melanogaster 61 CG16719 FBgn0036029 FBtr0076394 3 1 1 60 3L 9678907 9678925 GAGTACGAACACTATGCCA 57 9678946 9678967 AATTGATGTAGCGTGACTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4080 FBgn0035983 FBtr0076494 3 1 1 96 3L 9383210 9383388 CCTAATAGACTGGCCCTTCTG 59 9383134 9383153 AAGATATGCCTTGCACTGGA 59 NA Drosophila melanogaster 61 Hsp22 FBgn0001223 FBtr0100558 2 1 2 60 3L 9366370 9366389 GAAATCGAGTCTTGGAAGCA 58 9366411 9366498 ATCACCACATTGCTGTATCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 3 2 6 101 3L 9043448 9044237 GGAGATGGCAAACAAGACAC 59 9043366 9043384 CTTCAACAGCGACTTGGAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Doc1 FBgn0028789 FBtr0076522 2 1 1 93 3L 9034647 9034665 CCATGCAAGAGCTAATGGA 57 9034722 9035142 GGAAAGGGATCTGGAATCC 57 NA Drosophila melanogaster 61 Doc3 FBgn0035954 FBtr0076521 3 1 1 99 3L 8999389 8999478 CTTATCAGAATGACCGCATAACC 59 8999535 8999555 TTGATCTTCCGTTTGCATCTC 59 NA Drosophila melanogaster 61 CG13310 FBgn0035928 FBtr0076590 2 1 1 80 3L 8792919 8792939 AGGATCAGTTGCTCATATCGG 59 8792656 8792880 CGTCAATGTACATGTGATCTCC 59 NA Drosophila melanogaster 61 RpL14 FBgn0017579 FBtr0076633 1 1 1 102 3L 8594430 8594448 TACAAACTGGTCGCATTGC 59 8594512 8594764 GGACCATCTACCAGAACTCTG 59 NA Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 2 1 1 71 3L 8592864 8592946 GTCTGGTCATCTATTGCCG 58 8592811 8592829 GTATTGAACCATCTCGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 2 5 5 195 3L 8349036 8349116 ACTGCCTATAGAAGCTCGC 59 8348859 8348877 AGAACTGGATATGCTCGCA 58 NA Drosophila melanogaster 61 CG7201 FBgn0035865 FBtr0076716 3 1 1 113 3L 8284573 8284591 CACTTCGCTGACATTCGTG 59 8284410 8284498 AGTTTGTCGAAGTCAATGGTG 59 NA Drosophila melanogaster 61 CG7201 FBgn0035865 FBtr0076716 2 1 1 111 3L 8284573 8284591 CACTTCGCTGACATTCGTG 59 8284412 8284500 TTTGTCGAAGTCAATGGTGAC 59 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 3 2 2 111 3L 7315585 7315662 GTTGAAAGAATCCGTCAAGGA 58 7315494 7315513 ATTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 CG14830 FBgn0035755 FBtr0076888 1 1 1 83 3L 7244836 7244854 CTATGACCAGGCTGGTGAC 59 7244710 7244789 CTGTAGCGACTGATCTCGG 59 NA Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0273402 3 1 2 60 3L 7151615 7151634 GTAAACGACGACACAGAGGA 59 7151654 7151675 GAAGATGAGCTAGTGTGATGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 melt FBgn0023001 FBtr0100141,FBtr0302044 2 2 2 80 3L 7134393 7134470 CAGTCAACGGAAATAGCGAG 59 7134512 7134531 TCCTGCTGGTATTATCGCTG 59 NA Drosophila melanogaster 61 CG17744 FBgn0035730 FBtr0076932 3 1 1 113 3L 7019528 7019617 GCCTTCACAGATATGAATGGTC 59 7019436 7019454 CTTTGCAACGGAATAGGCA 58 NA Drosophila melanogaster 61 bin FBgn0045759 FBtr0076900 1 1 1 80 3L 6984896 6984914 TGCGATCAAGGAATCACCA 59 6984954 6985790 CGAAAGAATTCGTAGCTCTTCTG 59 NA Drosophila melanogaster 61 Cpr65Az FBgn0035686 FBtr0076996 3 1 1 113 3L 6154202 6154220 AATGGAGGATCTTCGGGAG 58 6154292 6154371 CTCGTACTCGTACATATAAGAACC 58 NA Drosophila melanogaster 61 Jon65Aiii FBgn0035665 FBtr0077041 1 1 1 60 3L 6044099 6044117 AACACCTGGGTTCTCACTG 59 6044200 6044218 AGTAAATGGTCACAGCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Jon65Aiv FBgn0250815 FBtr0077040 2 1 1 221 3L 6032543 6032638 GTACCGATGGAGTTCAGTC 57 6032823 6032841 AGGTCGAGTAGGAGTTGGA 59 NA DesignRelaxed Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 1 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 1 2 3 188 3L 5566920 5568048 AATCATCAGGCCTACAAGC 57 5566750 5566769 AGTCTCAAGCATTAGCTCCT 58 NA Drosophila melanogaster 61 CG4769 FBgn0035600 FBtr0077144 3 1 1 82 3L 5355021 5355039 AGGGTCAGTACTTCAACCC 58 5355085 5355217 CTCGTACTCGATGACCTCG 59 NA Drosophila melanogaster 61 CG15020 FBgn0035543 FBtr0073298 1 1 1 80 3L 4424894 4424978 AGTTCAACATATCGAAGCTGAG 59 4425017 4425037 AGTAATCCACTAAAGGAGCCA 59 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 1 4 4 93 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289164 4289256 AAACCAAGTCATCCGAGCT 59 NA InUTR Drosophila melanogaster 61 CG18675 FBgn0040696 FBtr0073218 1 1 1 165 3L 4174624 4174644 GCTAATGAGCGACTATTTGGG 59 4174830 4192200 CTCAAGTTTCTTGAGTTCCTCC 59 NA Drosophila melanogaster 61 CG14990 FBgn0035496 FBtr0073208 2 1 1 80 3L 4093304 4093388 AAATGAAGGAGGAGCACCT 58 4093432 4093450 CCGCAAACTTGATTTGGGT 59 NA Nonspecific Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 3 1 1 78 3L 4089197 4090039 GTGTAAAGAGCTCTGCGGA 59 4090081 4090099 CTCCGGTCTCAGGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 1 3 3 80 3L 4075935 4076811 TTTCAAGGAGGATGGCCTG 59 4075873 4075892 ATGTCATACTGCTTGTCGGT 59 NA Drosophila melanogaster 61 CG12766 FBgn0035476 FBtr0073172 3 1 1 81 3L 3939529 3939551 GGCCTTTCTCCTATAAATATCGC 59 3939351 3939491 TCAATGTCTACAAGTTCCACCT 59 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 3 2 2 80 3L 3812402 3812479 TGTGCTCATTGGTTTACTCG 59 3812520 3812540 TACGGAGTCACTATCAACTGG 59 NA Drosophila melanogaster 61 CG32262 FBgn0052262 FBtr0073184 3 1 1 60 3L 3809496 3809516 TTACATGCTGGATTGGATGAC 58 3809456 3809477 GTCTAAATAGCGAAAGTTCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12017 FBgn0035429 FBtr0073052 3 1 1 84 3L 3289113 3289131 CATAGCCCTGATTGGTCTG 57 3289177 3290311 GTATACAACCTTAGATGGCGG 58 NA Drosophila melanogaster 61 CG17737 FBgn0035423 FBtr0073044 2 1 1 80 3L 3223856 3223874 AAGACGCTAACCACTGTCC 60 3223918 3224322 TGCGAATTCCTTCTTGCAG 59 NA Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 3 2 2 101 3L 3185486 3185504 GATTCGATATTTGGCGGCC 59 3185568 3185643 GATGGAACTCCGTCATAGCA 59 NA Drosophila melanogaster 61 FR FBgn0035385 FBtr0072980 3 1 1 104 3L 3002288 3008540 TTCCCAAGCTTAAAGTGTCG 58 3008605 3008625 AGGTCGGATACTTATTGTTGC 58 NA InUTR Drosophila melanogaster 61 CG12182 FBgn0028504 FBtr0072955 3 1 1 83 3L 2599062 2599280 CAAGATGTCGGGAAATATTATCTGG 59 2599003 2599024 GTTTACAAAGTCGTGTACCGAG 59 NA Drosophila melanogaster 61 ecd FBgn0000543 FBtr0072903 3 1 1 89 3L 2265517 2265535 CTGAACGAGGAGACAAACC 58 2265373 2265391 GATGTTGTCGCCATAGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2034 FBgn0015359 FBtr0072877 1 1 1 151 3L 2257795 2257886 CGTAATAGATGAGCTAAATCGGG 59 2257997 2258015 ACTTGTCGATCAGTGCCTC 59 NA Drosophila melanogaster 61 CG15878 FBgn0035316 FBtr0072911 1 1 1 60 3L 2211709 2211728 GACATGATCGGATGCTTCAC 59 2211668 2211688 TCATCAACCAGAAAGTCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ru FBgn0003295 FBtr0072681 2 1 1 83 3L 1384768 1384786 ACATCATGAAGGGTCTGCC 60 1384832 1386222 AACACGAGAACCTCAAGGAG 60 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 3 2 2 92 3L 1196582 1196601 TTTGAGCCACATACGATTGC 59 1196653 1196955 GTCATCGTTGGGAATTAAGGAG 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 3 4 4 80 3L 345205 345225 TGCTACGTCTATTCGAATTGC 59 345087 345165 GAAGAGATCATCACAACCGTC 58 NA Drosophila melanogaster 61 Lsp1gamma FBgn0002564 FBtr0072463 2 1 1 80 3L 66650 66669 GATGAGCCTCTAATGTTCGA 57 66711 66795 ATCGAAGGTCTCGTATTGAG 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3316a FBgn0082972 FBtr0113516 3 1 1 60 2R 17214311 17214329 CGAAGCTCAGTTGCAAGTG 59 17214349 17214371 GTAGTCAGCGTTATGGATATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30506 FBgn0050506 FBtr0088145 1 1 1 60 2R 7287326 7287344 CTCTTTAGCTCAGTGGCAG 58 7287284 7287302 TGAGGATTGAACTCACGAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 2 1 1 105 2R 17521017 17521035 TAAATGGGCTTACGTTCGC 58 17520832 17520948 ATGGTTCGGTTGATGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 1 3 4 91 2R 10510485 10510503 TTCATTTGTTGGAAGCGCA 59 10510740 10510931 TGGGTCACATCATCTTAGGAC 59 NA Drosophila melanogaster 61 CG3776 FBgn0035088 FBtr0072395 1 1 1 80 2R 20857655 20857674 ATTCGACCCTACTTCGACAG 59 20857717 20857787 TGAGGATACTACCTGCAGC 58 NA Drosophila melanogaster 61 Orc4 FBgn0023181 FBtr0072425 3 1 1 97 2R 20684553 20684633 AAAGACAACGCTCATCAACTC 59 20684476 20684494 TGTGCAGATTACCGTCCAG 59 NA Drosophila melanogaster 61 ETH FBgn0028738 FBtr0072426 3 1 1 118 2R 20682882 20682903 GGATTCTTCCTAAAGATCACCA 57 20682727 20682803 GTAACAGAGCTGTGCTCAC 58 NA Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 2 2 2 85 2R 20569795 20569813 TCATAGTCGTAGGCACCCT 59 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 CG42361 FBgn0259707 FBtr0299960 2 1 1 132 2R 20495486 20495504 CCAATCCCAACATTGTGCT 58 20495600 20495676 TTTGCATGGTCATCCTCGA 59 NA Drosophila melanogaster 61 CG13590 FBgn0035012 FBtr0072353 1 1 1 110 2R 20381349 20381426 TATCTAAGCTGCGGAGAGG 58 20381257 20381275 TCGAGAATAGGCCTTCAGG 58 NA Drosophila melanogaster 61 SerT FBgn0010414 FBtr0072362 3 1 1 122 2R 20294900 20294974 AGTTCTTTGAGCGAAAGGT 57 20294796 20294814 ACAGGGAGAAGTAGACCAG 57 NA Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072367 2 1 2 97 2R 20269369 20270772 TGATTTAGGATGCACCTCGA 58 20269291 20269309 CATCCGACAGGAGAATGCT 59 NA Drosophila melanogaster 61 RpL39 FBgn0023170 FBtr0072185 3 1 1 87 2R 19949777 19949795 GAAGCTGGCTAAGAAGCTG 58 19949503 19949729 CTTAGCGTTGTAACGAATAGTG 57 NA Drosophila melanogaster 61 CG3825 FBgn0034948 FBtr0072204 2 1 1 94 2R 19863737 19863755 GTTTACAGCATGCGGTGAG 59 19863601 19863681 TGAAACGAACCTTCTTGACAG 58 NA Drosophila melanogaster 61 wibg FBgn0034918 FBtr0072233 1 1 1 116 2R 19743992 19744010 ATCCAAGACACTGGAGGAC 58 19743894 19743912 CTGCTCTCGATCTGTTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072100 3 1 2 61 2R 19572550 19572568 ACGAGCACGGATATGTCTC 59 19572445 19572525 GTTGACATCACTTGGCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG17662 FBgn0034884 FBtr0072106 2 1 1 97 2R 19493489 19493561 TGGTATTTCGGGTCTCTTCAC 59 19493412 19493430 AGTAGATCCAGTGGTGTGC 59 NA Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072013 2 1 4 181 2R 19274136 19274541 GAATCGTAAGACTTTGAAGAGC 57 19274683 19274701 TCTGGTCACGAGTCTTCTC 58 NA InUTR Drosophila melanogaster 61 yellow-d2 FBgn0034856 FBtr0072012 2 1 1 99 2R 19268965 19269037 GTCTACTACAAGCATGGCG 58 19269100 19269118 TTTCGTTTGTGACGTAGGC 58 NA Drosophila melanogaster 61 CG3493 FBgn0034854 FBtr0072036 2 1 1 96 2R 19259826 19259846 AACTTCCTCATACTCGAACAG 57 19259684 19259768 TGTGTTGCATGGATACCAG 57 NA Drosophila melanogaster 61 CG30416 FBgn0050416 FBtr0300955 3 1 1 86 2R 19209575 19209672 AGATACAAGTTCGACAGATCTC 57 19209510 19209528 ATGTCAGATTCGGAATGCC 58 NA Drosophila melanogaster 61 RpL22-like FBgn0034837 FBtr0072049 2 1 1 105 2R 19135236 19135308 TCTTTGGAGAATGAGTTCCCA 59 19135151 19135169 TACAGGAGTCACCTTAGCC 58 NA InUTR Drosophila melanogaster 61 CG3700 FBgn0034796 FBtr0071904,FBtr0299812 1 2 2 83 2R 18782169 18782187 TTGTCTGCTGTCCCATACC 59 18782234 18782317 ATTGCTTGCACTGCTTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG3501 FBgn0034791 FBtr0071907 2 1 1 90 2R 18769953 18769971 ACCAGTGCCTGTATGTCAC 59 18769400 18769420 TAGCCTGCGATTACTAATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 qkr58E-3 FBgn0022984 FBtr0290254 1 1 1 130 2R 18298122 18298199 GCCTACAGATCTGTCTTCGA 59 18297869 18297887 TACTCATAGGCCACCTCCT 59 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 1 3 3 80 2R 18113471 18113490 CGCTATACTACACGTTGGGA 59 18112904 18113430 ATGAAAGACTCAACAAAGCCG 59 NA Drosophila melanogaster 61 CG34205 FBgn0085234 FBtr0112398 2 1 1 80 2R 18018691 18018709 ACGTCCACTTACAGTTGCA 59 18018464 18018651 GGTAAGGATCAGAAGTTTCATGC 59 NA Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 2 2 2 165 2R 18013848 18013868 TCTCAGAGGTACTGAACTCAC 58 18013648 18013721 TTTAAGGCTTTCTGCTCGC 58 NA Drosophila melanogaster 61 CG42496 FBgn0260222 FBtr0300625 1 1 1 88 2R 17579806 17579824 TAGATCTAGGCAAGTGGGC 58 17579876 17579951 ATTATCGCAAATCCCGGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG17974 FBgn0034624 FBtr0071611 3 1 1 81 2R 17236920 17236938 TCTGGTTCAACGAGTTCGA 59 17236798 17236878 TGACCGTAGTCCTCAAATATGG 59 NA Drosophila melanogaster 61 CG30390 FBgn0050390 FBtr0071617 2 1 1 97 2R 17180766 17180839 CCCAACAGATTCAGGATCG 58 17180687 17180705 CACCAGACTAGCAATGGAG 57 NA Drosophila melanogaster 61 CG9350 FBgn0034576 FBtr0071530 1 1 1 105 2R 16912654 16912852 AAATTTCGGCAGCAAACCA 59 16912921 16912939 ATACCGCGTACTTGTTGGT 59 NA InUTR Drosophila melanogaster 61 CG11110 FBgn0034535 FBtr0086231 1 1 1 192 2R 16529356 16529374 CTTTGGCAAGTCCTTGCTG 59 16529595 16529613 GAGCGATATTATGTCGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Obp57e FBgn0050145 FBtr0086265 3 1 1 86 2R 16435662 16435748 AATGTTCTCGCTAACACTTCAG 59 16435597 16435616 ATTCTCCATCACTTGGTGGG 59 NA Drosophila melanogaster 61 MED8 FBgn0034503 FBtr0086297 2 1 1 60 2R 16214111 16214131 CTTGAGCTAGAGTACGAGACC 59 16214071 16214092 AGATAATGGCAAAGTTGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9090 FBgn0034497 FBtr0086303 3 1 1 92 2R 16167937 16168500 ACTTTGAAGCACTTCTCTAAGG 58 16167866 16167884 AGTTGACGCTAGTGAATGG 57 NA InUTR Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 3 2 2 67 2R 16151892 16151911 CGATGTCGATCTTACCAAGC 58 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp56f FBgn0043533 FBtr0086328 1 1 1 162 2R 15600951 15600969 ATCTCTGCTATCTGGCTCC 58 15601149 15601167 TCACTTCCAGTAAGCAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086537 1 1 4 102 2R 15336244 15336842 CCCAGACATGTTTCTGGGA 59 15336160 15336178 TACACATTGATGCGCTCCA 59 NA Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086581,FBtr0086580 3 2 2 171 2R 15024882 15024900 CTGTTCATCTCTGGCTGTC 58 15025035 15025334 AAGCATGATGACCACTCAC 57 NA InUTR Drosophila melanogaster 61 CG15107 FBgn0041702 FBtr0086600 3 1 1 101 2R 14859262 14859347 GATTATCTACGAAGTCGCGGA 59 14859181 14859199 GAAATGCGTTTCAGCTGCT 59 NA Drosophila melanogaster 61 CG15082 FBgn0034397 FBtr0086617 1 1 1 88 2R 14718798 14719687 ATTTGCAGGTCCACTACGA 59 14719739 14719757 GAATTTGACGGTCACGAGC 59 NA Drosophila melanogaster 61 CG15080 FBgn0034391 FBtr0086613 1 1 1 80 2R 14680751 14680824 CAATCTGAAGCCAGAGAAATCC 59 14680865 14680883 GTTTCAGTGGTCGACTCCT 59 NA Drosophila melanogaster 61 CG33998 FBgn0053998 FBtr0100053 2 1 1 70 2R 14626163 14626182 TCGTGACCAGAGAATTTGTG 58 14626275 14626296 ATCCGTGATCACAATTTGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18604 FBgn0034378 FBtr0086606 3 1 1 88 2R 14590175 14590286 GATCAGTTTGCCAGGTTCG 59 14590337 14590356 GAGGAACTTCGATGTCATGG 58 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 1 4 4 80 2R 14350182 14350257 GGACACAAGTCGAAGATCC 58 14350120 14350138 CGCTCGTGTATCATCACAG 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 GstE9 FBgn0063491 FBtr0086677 1 1 1 60 2R 14296674 14296695 CTTCAGTATGAGTATAGGCTGG 57 14296716 14296734 TGAACTCCTTCGTCTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idgf5 FBgn0064237 FBtr0086668 1 1 1 101 2R 14281871 14281889 TGCCACACTTCTCGAAGAG 59 14281951 14282038 ACATCAATAAAGAGTTCCGCTG 59 NA Drosophila melanogaster 61 CG18107 FBgn0034330 FBtr0086663 3 1 1 80 2R 14272189 14272271 TTTGGCCAATGCTATTCCG 58 14272314 14272333 CCACGAACATTGCAATTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086785,FBtr0086786 3 2 2 111 2R 13992672 13992690 AGTTCGATCTACGGCACAC 59 13992434 13992601 GCGTAATAACCTTCATGTCTTCC 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 2 2 2 95 2R 13987029 13987047 CATGGTGAAGGGTCAGGAG 59 13987105 13987193 CGCTTACGTTTATGCATGCT 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 1 2 2 80 2R 13987097 13987187 CGAAGATAAGCATGCATAAACG 58 13987228 13987246 GGGACTCATTTGGATCGTC 58 NA Drosophila melanogaster 61 HLH54F FBgn0022740 FBtr0089547 3 1 1 178 2R 13645147 13645601 GTTCTCAAAGCTCCCAACC 58 13645743 13645761 CTGCTTGATGTAGAGCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG34194 FBgn0085223 FBtr0112387 3 1 1 87 2R 13432116 13432336 GTCTTCCTCAATGTCCTCCT 58 13432386 13432404 AGACGGTGACACAATAGCC 59 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087124,FBtr0087123 2 2 2 68 2R 12458148 12458166 ATCATTGGCGTCTACAACG 58 12457857 12457875 GTAGTGACCGATCATCTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 3 2 2 89 2R 12229045 12229063 AGGATCTGTACGATGCCAG 59 12228915 12228993 AGAAAGTTACGCCATTGGGA 59 NA Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299971 1 1 2 124 2R 12179210 12179283 AATTCAGCTTTAAGCGCGG 59 12179371 12179389 AGTCCAGATTGGACTTGCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 CG30088 FBgn0050088 FBtr0273296 1 1 1 80 2R 11578971 11579052 ATGAGGCCGTATCTAAAGGTG 59 11579094 11579112 GGGAGAACAAGATCCACCC 59 NA Drosophila melanogaster 61 eIF2B-gamma FBgn0034029 FBtr0087336 1 1 1 80 2R 11430951 11431030 GTTATCGATTATCTACGAAGGAAGG 59 11431065 11431086 GTGCTGCTTCTTTATCAAATGC 59 NA Drosophila melanogaster 61 CG30471 FBgn0050471 FBtr0087333 2 1 1 135 2R 11423917 11424003 GTCTTCTTTACCATCAGTGGC 59 11424100 11424118 TCAGGTAGCGATGGAACAG 59 NA Drosophila melanogaster 61 CG12964 FBgn0034022 FBtr0273307 1 1 1 107 2R 11377132 11377150 ATCTGTATCCCGAAGTGGC 59 11376846 11377064 GATATTGAGCAACTGCACTCTG 59 NA Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393,FBtr0087394 1 2 2 60 2R 11184880 11184899 AAACTTTACTGTCTCAGCGG 58 11184839 11184857 TGGACATCTCTTCCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112616 1 1 3 86 2R 10229754 10236910 AACTTTCGATCGAATTCCAAGG 59 10236957 10236975 GTATATGCCATGGTCGGGA 59 NA Drosophila melanogaster 61 tum FBgn0086356 FBtr0087641 1 1 1 80 2R 9744968 9744986 ACTGATGAGGAACCACACC 59 9744837 9744924 AACCGTATGCGTTTCTGAC 58 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 1 2 2 115 2R 9741671 9741689 TAAGATCTTCGCTAGCCGC 59 9741378 9741396 CGGTCTTGATGTACTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087747 3 1 2 60 2R 9144602 9144620 CAATCTGCATATGACCGGG 58 9144644 9144662 GGCGTCTTCGTCTAGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34235 FBgn0085264 FBtr0300636 1 1 1 80 2R 9099618 9099639 GTTCGGCGTACTTATAATTGGA 58 9099504 9099577 TTCCGTCTTATCCATGGCA 58 NA Nonspecific Drosophila melanogaster 61 CG34315 FBgn0085344 FBtr0300287 1 1 1 80 2R 9093546 9093567 TCTTCAGCTTCCTTATATGGAC 57 9093415 9093505 CCAAAGTAAGATCCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG3790 FBgn0033778 FBtr0087815 3 1 1 80 2R 8760659 8760739 CATGATCAATCATATGGGTCAGC 59 8760601 8760621 GCAAATCCTCCCAAGATTAGC 59 NA Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0289995 2 1 2 102 2R 8736273 8736356 AATTATGGCTTGTGGCAGTG 59 8736190 8736208 CTTAGCCACGGTATTCCGA 59 NA InUTR Drosophila melanogaster 61 ox FBgn0011227 FBtr0087861 3 1 1 134 2R 8644904 8644922 TACAACACCCTGTTCAAGC 58 8644722 8644806 GTCCTTCCAGAGTTTGCCT 59 NA DesignRelaxed Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 1 4 4 80 2R 8469433 8469802 AATTTACAGAACGGAGGACGA 59 8469373 8469391 TTCTCCAGCACTCGAATCG 59 NA Drosophila melanogaster 61 Cyp301a1 FBgn0033753 FBtr0087824 3 1 1 81 2R 8455035 8455055 GTTTGGTCAAGTACAAGAGTG 57 8455098 8455170 CAAGGCTCTCCATGTACTC 57 NA Drosophila melanogaster 61 CG13160 FBgn0033720 FBtr0087911 3 1 1 80 2R 8262319 8262390 AACTTTCTAAGGACGATGGC 58 8262430 8262451 TATCATGTGGACTGACATAGTG 57 NA Drosophila melanogaster 61 Cyp6g1 FBgn0025454 FBtr0087992 1 1 1 80 2R 8074397 8074482 TTATGCAGGAGATTGGAAAGG 58 8074523 8074542 TCTCCGTAATGAAACTCCCA 58 NA Drosophila melanogaster 61 CG13186 FBgn0033680 FBtr0087981 2 1 1 60 2R 7968963 7968981 AACATTCTTCACGCAACGG 59 7969004 7969023 TCCGTTTCGATTCTTCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 1 2 2 67 2R 7869874 7869956 GTACACAAGCGTAGTGCTG 59 7869825 7869843 AGGTAGTCAGCTATGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088035 2 1 2 97 2R 7779676 7781067 CAGCTTATTCGAGACCATAGTG 58 7781125 7781143 TCGACTTACCGGAATCGAC 59 NA InUTR Drosophila melanogaster 61 CG13196 FBgn0033645 FBtr0088084 3 1 1 85 2R 7572773 7572852 AATGATGTACAAGCTCGCAG 58 7572707 7572725 TTTCTCAGCAACTCCACGT 59 NA Drosophila melanogaster 61 CG7763 FBgn0040503 FBtr0088135 2 1 1 60 2R 7302613 7302631 GATCGACGTGACCAATCAG 58 7302654 7302673 CTTCGATCCTTTGGTCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Ec FBgn0033600 FBtr0088189 3 1 1 112 2R 7147199 7147344 ATGTGCAAGATCCTTCCTC 57 7147105 7147124 TTGATGATCTCGGACTTCAG 57 NA InUTR Drosophila melanogaster 61 Cpr47Ea FBgn0033597 FBtr0088190 3 1 1 133 2R 7140325 7140343 CAGTTTCATTCAGGCGCAG 59 7139939 7140233 TTGTCTCGTAGTTGTACTGATAGG 59 NA Drosophila melanogaster 61 CG13226 FBgn0033594 FBtr0088108 3 1 1 60 2R 7132016 7132034 ATCGGACTCATACTACGGC 58 7132058 7132076 GTATCCATAGTTGGGCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7222 FBgn0033551 FBtr0088223 3 1 1 81 2R 6701651 6701670 GGTAATGAAGAGCTACTGCC 58 6701712 6701800 CGTTGATCCAGTACATATCGT 57 NA Drosophila melanogaster 61 CG11777 FBgn0033527 FBtr0088273 1 1 1 89 2R 6356363 6356381 GAGATCCTACGAACACCGG 59 6356431 6356715 GATCAGTGTGCTTAATGGTCTC 59 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088362 2 2 4 85 2R 6138638 6139440 AACAACGAGAACAACAATGC 57 6138572 6138590 TTCACACGCATAATCCCGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11866 FBgn0033486 FBtr0088423 1 1 1 80 2R 6007482 6007560 TACAACTAAGCGACCCACG 59 6007604 6007622 ACCATATGGTTCTGAGGCG 59 NA Drosophila melanogaster 61 CG1371 FBgn0033482 FBtr0088428 2 1 1 112 2R 5962137 5962308 AGAAAGGACAATCTTTAGTGCC 58 5962046 5962064 CGATTTGTCCAACTGGGAG 58 NA Drosophila melanogaster 61 CG12133 FBgn0033469 FBtr0088386 2 1 1 80 2R 5855255 5855276 CTACACGAGAAATGGAAGACAC 59 5855312 5855399 CTGATCTGAAGAGTGTATTTCACC 59 NA Drosophila melanogaster 61 l(2)03659 FBgn0010549 FBtr0302504 2 1 1 80 2R 5282558 5282578 TTCCACAACTTGGTCAATCAG 58 5282617 5282702 GGAGGATTCAAATGTCTCTTGG 59 NA Drosophila melanogaster 61 CG30343 FBgn0050343 FBtr0088594 2 1 1 154 2R 5139743 5139762 GACTTCACAACTGTAAGCCC 58 5139879 5139897 TAGTTGGGTTGGAATTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13751 FBgn0033340 FBtr0088644 3 1 1 253 2R 4787746 4787769 TACTTTATCGAGTGTACCCTACAC 59 4787981 4787999 CAGGAGCGATTTGAGAAGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 PGRP-SC1a FBgn0043576 FBtr0088707 1 1 1 60 2R 4597472 4597490 CAGAGCGTCCAGAACTACC 59 4597514 4597532 GGAAGTTGTAGCCGATGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30360 FBgn0050360 FBtr0273322 1 1 1 81 2R 4353750 4353771 CGGGATTCGTGAAGATAATCAG 59 4353813 4353909 TCGTGATTTCCCATCACCC 59 NA Drosophila melanogaster 61 CG42516 FBgn0260390 FBtr0300661 3 1 2 70 2R 4018672 4018773 CATTTCTAACAAGGGCCCA 57 4018620 4018638 CTCGTACTCCGAATCGGAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14763 FBgn0033243 FBtr0088875 2 1 1 80 2R 3854504 3854578 CGACAACTACGACAGATATCG 58 3854444 3854462 TTGACCATGGAGTAGAGGC 58 NA Drosophila melanogaster 61 CG1850 FBgn0033154 FBtr0089022 1 1 1 60 2R 3147543 3147563 CAACCTATCCAGGAAACTCCA 59 3147503 3147521 TGAACTGCTTCAGATGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42El FBgn0033134 FBtr0089032 2 1 1 80 2R 2933509 2934790 CTTATGGGCGATACTCGGT 59 2934834 2934852 CCGATGGCATATGCATCTG 58 NA Drosophila melanogaster 61 Tsp42Ej FBgn0033132 FBtr0089030 3 1 1 174 2R 2928036 2929080 CATTCTCATTGTGACGTGCA 59 2929211 2929235 GTATATGGAATACTTGTACGACACC 59 NA Drosophila melanogaster 61 Bap170 FBgn0042085 FBtr0086107 1 1 1 89 2R 2525435 2525455 TTCATCAGGAGAATCATGCAC 58 2525505 2525694 GAATGTTGCTCCATCGTACG 59 NA Drosophila melanogaster 61 CG7861 FBgn0033055 FBtr0085974 3 1 1 83 2R 1931529 1931604 CCCATTTGGAATGAGGCTG 58 1931648 1931669 CTTTAAGTGCGGAGTCTTACTC 58 NA Drosophila melanogaster 61 CG10465 FBgn0033017 FBtr0086094 1 1 1 88 2R 1228012 1228079 ACTGATTCGGAAGGATGGA 58 1227942 1227960 AATGGAACAGTGCCATCTC 57 NA Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 1 1 1 63 2L 1789271 1789353 GTATATCAGACTTTGCCTTGTACTG 59 1789232 1789250 AATAGTCCGCAGTGAAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 snRNA:U4:38AB FBgn0003931 FBtr0081292 1 1 1 69 2L 19810774 19810792 CTGAGGTGCGATTATTGCT 58 19810825 19810843 TGGACGGTATTTCACGTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31808 FBgn0062978 FBtr0080943 2 1 1 89 2L 16715833 16715851 GGCCTACCTAGCTGAATCC 59 16705781 16715780 ACGCACAAGCGTAATATGC 59 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 2 3 3 81 2L 21741846 21741866 CATTGCTTTGAGTTGTTTGCG 59 21741726 21741803 CCTCTACCACTTTGCCCTC 59 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959,FBtr0085901,FBtr0085902,FBtr0301000 1 4 4 92 2L 21701104 21701123 GATGTTCCATACGATGGCAC 59 21701178 21701779 ATGTGCAGGATGTCCTCTG 59 NA Drosophila melanogaster 61 His2A:CG33853 FBgn0053853 FBtr0091857 1 1 1 60 2L 21518933 21518955 CTAGAATTATTCCGCGTCATCTG 59 21518974 21518993 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dimm FBgn0023091 FBtr0081514 3 1 1 101 2L 21339192 21339212 AATTACAACACAGACGGACAC 58 21339273 21339357 ATTGCTTAGCTGTGAAGTTCG 59 NA Drosophila melanogaster 61 CG14401 FBgn0032900 FBtr0081430 2 1 1 103 2L 20870747 20870836 GTACCATGAGGGAATGCCA 59 20870903 20870921 CAGGATCTGGTCCATCGTC 59 NA Drosophila melanogaster 61 CG9319 FBgn0032881 FBtr0081460 3 1 1 114 2L 20752113 20752134 GAAGATTCTAACCGACTTTGGG 59 20751947 20751965 CGGGTTCTTCAGATCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 2 2 2 88 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729655 20729884 TCGTCGTTATCCAGTTCCT 58 NA Drosophila melanogaster 61 CG9316 FBgn0032878 FBtr0081396 3 1 1 102 2L 20725803 20725876 ATGGTTGCTATACAGGCCA 58 20725719 20725737 AGCGGAATTCCAAACTCCA 59 NA Drosophila melanogaster 61 CG40169 FBgn0259995 FBtr0100178 2 1 1 107 2L 20238694 20243219 GAAGAGCAGTGGTTCTTGC 59 20243289 20243308 ACTTTCACTCATCAGTCCGA 58 NA Drosophila melanogaster 61 CG10721 FBgn0032846 FBtr0081333 3 1 1 60 2L 20092536 20092557 ACCTGTGACTTTATTGTTTCCG 59 20092578 20092596 AATCACACGTGTAGTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TepIV FBgn0041180 FBtr0081254 2 1 1 81 2L 19553899 19553980 CCCAGACTACAATATTCAAGGA 57 19554019 19554040 GAATACATGACTATCATGTGCC 57 NA Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 2 2 2 106 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527941 19528094 TAAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211,FBtr0081213,FBtr0081212,FBtr0081210 2 5 6 80 2L 19409457 19409475 GTGCATCAGGCCTATACGT 59 19404674 19409414 GTTGCTAACCTTGAAGTCGG 59 NA Drosophila melanogaster 61 gammaTub37C FBgn0010097 FBtr0081228 1 1 1 90 2L 19185395 19185413 CAACCATTACATACCGCGG 59 19185215 19185343 GTTGTACAACTTGGAGTACGG 59 NA Drosophila melanogaster 61 CG10470 FBgn0032746 FBtr0081146 1 1 1 130 2L 19049119 19049140 TGTCAATAGTGCTATCGATGAG 58 19049231 19049300 CACCCATGTAAGACCTTCG 58 NA InUTR Drosophila melanogaster 61 ssp3 FBgn0032723 FBtr0081193 2 1 1 81 2L 18940623 18940701 AACCGTAGTGGAATCCTGC 59 18940560 18940579 TATGGTCTTGGAGAACTCGC 59 NA Drosophila melanogaster 61 CG10383 FBgn0032699 FBtr0089628 2 1 1 96 2L 18693038 18693056 GGAACTTCACGTGATGCTG 59 18692900 18692979 AATGTCCTCAATGGGATCCT 58 NA Drosophila melanogaster 61 CG31790 FBgn0051790 FBtr0081076 1 1 1 89 2L 18667669 18667687 CTTAATGCCCTGAAGGAGC 58 18667538 18667618 GCGCATAGAATTTATTAGCGC 58 NA Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090,FBtr0081089 3 2 3 284 2L 18443194 18443212 TTTCCCGAAACGTGAACAC 59 18442846 18442864 AGTGGAGCTTCGCATAGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31788 FBgn0051788 FBtr0081056 2 1 1 241 2L 18257755 18257834 TTGAGTCTTTCGATTGGACC 58 18257533 18257553 CATGTGTATTCTTGTCAGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 1 5 5 80 2L 17442578 17442665 GATACGCCATATCGTCCTC 57 17442516 17442536 GTTGATCTCCAGTGTACAGAC 58 NA Drosophila melanogaster 61 CG31803 FBgn0051803 FBtr0081010 3 1 1 82 2L 17412179 17412253 CCTACGTTAAGCTGGACCC 59 17412115 17412135 CTTAAGCTTGACCACTTCAGG 59 NA Drosophila melanogaster 61 Rpb11 FBgn0032634 FBtr0081011 2 1 1 86 2L 17410024 17410099 CATGATCCGCAACCAACTG 59 17409956 17409974 ATGACGAACTTGTGCTCCA 59 NA Drosophila melanogaster 61 Cyt-c-d FBgn0086907 FBtr0080888 1 1 1 207 2L 16716194 16716212 AGAGCGAGAAGAACTGTCC 59 16719288 16719309 CCTTCTTTATATTGGCATCGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 2 7 7 111 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467651 16467669 CTTGTAGTATGCCGTCGGT 59 NA Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 1 2 2 80 2L 16247175 16247261 GATTAGAGATAAACGACGCGG 59 16247115 16247133 TTTAGTCTCGCCTTTGGCT 59 NA Nonspecific Drosophila melanogaster 61 CG4891 FBgn0028520 FBtr0080815 1 1 1 60 2L 16095333 16095353 CTCTATGTGGTGAGTCCTGAG 59 16095375 16095393 ACTCGGTTAGTGATGGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31821 FBgn0051821 FBtr0080809 3 1 1 106 2L 15901343 15901414 ATTAATACAATCCCGCGCC 58 15901255 15901273 TTGATCAGAGCCAATGTGG 57 NA Drosophila melanogaster 61 CG18109 FBgn0028901 FBtr0080786 2 1 1 119 2L 15784160 15784245 CTTGTTAACGAGTAACTGATATCGG 60 15784322 15784340 TCGGTATTGCCATCCTCTC 59 NA InUTR Drosophila melanogaster 61 CG15267 FBgn0028862 FBtr0080707 1 1 1 80 2L 15250878 15251016 GTCTATATGCGGAATCCTACG 58 15251055 15251076 GCTTAATCAATGGCAAGTACTC 57 NA Drosophila melanogaster 61 CG15282 FBgn0028855 FBtr0080656 3 1 1 134 2L 14712677 14712695 GCAACATCGAAGCATCCTC 59 14712862 14712882 CATATCCGAATTGAGGAAGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15282 FBgn0028855 FBtr0080656 1 1 1 132 2L 14712677 14712695 GCAACATCGAAGCATCCTC 59 14712862 14712880 TATCCGAATTGAGGAAGCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15286 FBgn0028531 FBtr0080625 1 1 1 60 2L 14339124 14339144 CGTAATGTCATTGTGGAAGAG 57 14339165 14339184 CATTGATGGTGAATGGAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimB4 FBgn0028542 FBtr0080617 1 1 1 91 2L 13968826 13968905 TTGCTATATGACCTGCGAG 57 13968753 13968772 AGGTCGTCGTATTCTTATCG 57 NA Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559 2 1 2 76 2L 13933402 13933420 TCAAGCAGATCGTGAAGGT 59 13932953 13932971 GACTTCACTTCTCGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 b FBgn0000153 FBtr0080542 1 1 1 109 2L 13822961 13822979 TACAACATGTGGATGCACG 58 13823116 13823134 TTCCAAGTGACCGAATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16865 FBgn0028919 FBtr0080540 2 1 1 81 2L 13811693 13811711 CAGGAGGAGTACAACGAGG 59 13811756 13811834 GGGTGCAATCCAGAATCAG 58 NA Drosophila melanogaster 61 t-cup FBgn0051858 FBtr0080381 3 1 1 60 2L 12497153 12497173 GACTGTTTCGAAATTACTGGC 58 12497113 12497133 CAGATTCAATTTGATTGGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080342 3 1 2 146 2L 12173004 12173022 ACTGCTATTTACACGCCCA 59 12173210 12173228 CCAACATTTGATCGCCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31860 FBgn0051860 FBtr0080340 3 1 1 144 2L 12165457 12165478 CGTTTCTCATTTCGATTTCTGC 59 12165583 12165808 ATGTACACGAGGATGCCTG 59 NA Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239,FBtr0080240 3 2 2 84 2L 11518877 11518895 GAAGATCGAGAGGCTGGAG 59 11518943 11519018 TTCCGTTACAAAGCGAAGG 58 NA Nonspecific Drosophila melanogaster 61 CG6488 FBgn0032361 FBtr0080248 3 1 1 80 2L 11497781 11497799 TTCTTTAAGACCGCTGCAG 58 11497661 11497739 AAGTCGCTGATCTTATTGTGC 59 NA Drosophila melanogaster 61 Ppt2 FBgn0032358 FBtr0080212 2 1 1 81 2L 11280693 11280715 TCGATCAGGTTAGGGATTATCTC 59 11280755 11280836 CCTCCTTGTGAGTATCCCAG 59 NA Drosophila melanogaster 61 Csl4 FBgn0032346 FBtr0080226 3 1 1 151 2L 11123435 11123454 ATGAGACTGTAGTCTGCCTG 59 11123249 11123321 CACCTGGCATTTATCACCC 58 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 2 3 3 80 2L 10848457 10848551 CAGTCTGGAAACAAGAACGG 59 10848396 10848417 ATCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0080136,FBtr0290229 2 2 2 61 2L 10771182 10771200 CAACCAGCGCATCAATCTC 59 10771225 10771243 TGTTTATCACCTCGGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18301 FBgn0032265 FBtr0080094 2 1 1 80 2L 10532449 10532467 CTGGTCCACGGACTAATGG 60 10532506 10532585 CTCGTACAACATGTATCCTAAGGA 60 NA Drosophila melanogaster 61 CG31755 FBgn0051755 FBtr0079972 2 1 1 89 2L 9999164 9999182 GCTGGAAGAACTAAGTGCG 58 9999027 9999112 ATCAACCGATTAGGGCTCTG 59 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 1 3 3 80 2L 9957836 9957854 AGATTCTCAGGGAGCAGAC 58 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 ppk16 FBgn0065108 FBtr0100832 1 1 1 80 2L 9771415 9771498 CAACATTCAACAATGCCACAG 59 9771355 9771373 TGTCCGTTCGATATCTGGT 58 NA Drosophila melanogaster 61 CG4364 FBgn0032138 FBtr0079848 1 1 1 107 2L 9710712 9710793 CGTGACTACAAGATCTTTGCC 59 9710625 9710645 GTGATCGAGTTTGATTTCGGG 59 NA Drosophila melanogaster 61 CG12438 FBgn0032065 FBtr0079732 3 1 1 60 2L 8752952 8752971 TACATCAGCTTCGAGTACCT 58 8752993 8753012 TATAGAGCACTATGGCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8498 FBgn0031992 FBtr0079640 1 1 1 148 2L 8162225 8162318 AATTGCAGGAATTCAACCAGG 59 8162038 8162056 CTTGAAGTCCAGAAAGCCG 58 NA Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301129,FBtr0301128 3 2 2 75 2L 8028037 8028055 CATCAATCTGCCACAGCTC 59 8027906 8027927 ATCTATCCAGAAATCAGCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079482,FBtr0079483 1 2 2 119 2L 7765147 7765224 ATGCCAAGGATATTCGCGA 59 7765307 7765325 TATCTTGTTCCGGCTCCTC 58 NA Nonspecific Drosophila melanogaster 61 CG5177 FBgn0031908 FBtr0079441 3 1 1 82 2L 7406174 7408151 AACTGGGACAAAGGTGAGG 59 7408194 7408215 TAGACGATCTTCAGGTTCTTGG 59 NA Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300459 3 1 2 93 2L 7257555 7257705 GGTGAGTGAGACAACAAGG 58 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 smt3 FBgn0026170 FBtr0079356 1 1 1 80 2L 6967382 6967523 AATTTGAGGAAATCAGCACG 57 6967321 6967339 TTGAAGCTGCTAAGTGGTC 57 NA InUTR Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 1 2 2 80 2L 6652373 6652394 CTCAAGAAGCAACTTGAATCTG 58 6652432 6652505 ATCCAGATCCCTTTCTAATGAG 57 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 1 2 2 86 2L 6640924 6645980 GGAAGCAAGTATACCTCGTG 58 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 3 1 1 94 2L 6264419 6264437 TCTTGATTCTCCTCGCCAC 59 6264286 6264361 AACGATCTTGGAGAAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7277 FBgn0031713 FBtr0079128 1 1 1 60 2L 5531698 5531716 CCAGCACGATAACTTTGCC 59 5531656 5531676 ATCCAGGATCAAATCGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 2 5 5 87 2L 5155462 5155481 TTTCTGTGAGAAGACCCTGG 59 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0079012,FBtr0079015,FBtr0302569,FBtr0100260,FBtr0079014,FBtr0100259,FBtr0079013 2 8 8 258 2L 5067981 5067999 TAGCGATCTGAAGCGATCC 59 5068221 5068307 CAAATCCAGTGCCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 3 2 2 82 2L 4651674 4651768 CCAAGCAGAACTGCTTCTG 59 4651813 4651832 CCAAGGATACTTGTTGGAGC 58 NA Drosophila melanogaster 61 CG15435 FBgn0031608 FBtr0077441 1 1 1 69 2L 4460099 4460117 TAAACGTTCTGCTGGAGGA 58 4460220 4460238 CATATGTTGCGTGGCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34177 FBgn0085206 FBtr0112368 2 1 1 83 2L 4433987 4434006 GCTATGCTCCTATGGATCCT 58 4434052 4434128 CTTACCAGGATGGTTCGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3921 FBgn0031571 FBtr0077496 1 1 1 80 2L 3800319 3800338 ACGCTCGTCACAATTATTGG 59 3800376 3800462 GCATAGGATCATCTGACTTATCTC 58 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 1 2 2 93 2L 3716219 3716241 GGATACCATCAAGCTGTTAAAGG 59 3716294 3716397 CACACTTTGCTTGACCTCC 59 NA Drosophila melanogaster 61 CG3604 FBgn0031562 FBtr0077545 1 1 1 60 2L 3697555 3697573 CTGTTCTATCGCTACGCCT 59 3697513 3697531 CACCGTAAACGAACTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12795 FBgn0031535 FBtr0113019 1 1 1 172 2L 3453115 3453139 GATTTCAGTCCATATTCAAGACCTC 59 3453269 3453437 GTCTTCGCTCATATTGCCC 58 NA Drosophila melanogaster 61 PpD6 FBgn0005779 FBtr0077660 2 1 1 60 2L 3110499 3110517 GAACGACTTCGATCTGGTG 58 3110538 3110559 AAAGAACTCGTATCCATCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17219 FBgn0031494 FBtr0077650 1 1 1 134 2L 3029925 3029997 AGGACTACAACAAAGATGTGC 58 3030088 3030111 GAGACCAATCTCCAGAATATAAGG 58 NA Drosophila melanogaster 61 CG10882 FBgn0031408 FBtr0077810 1 1 1 80 2L 2234286 2234305 TGGACAAGCATGAAAGACCT 59 2233968 2234247 GAGTATTGTTCCGACAGTAATCC 59 NA Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0077841 1 1 2 86 2L 2226170 2226485 GCTTCTAGAGTGATACTGCC 57 2226103 2226122 CCTCTGAGAGTTTCTTCGAG 57 NA InUTR Drosophila melanogaster 61 CG7295 FBgn0031372 FBtr0077891 3 1 1 60 2L 1870754 1870774 TGAAAGCATAACAGATGGGAC 58 1870792 1870814 CATCGTTACATCTGTGTCATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077914,FBtr0077915 2 2 2 239 2L 1614010 1614028 CTCTCCACGGGATTGAAGG 59 1613230 1613248 CATCGATCCGATGAAGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 3 1 1 141 2L 1502038 1502056 TCTCATCCTCGACACAAGC 59 1501855 1501933 GGTTTCCACAGGAACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5126 FBgn0031320 FBtr0077978 3 1 1 102 2L 1183603 1183621 ATGAGAATGTGCTTCGGAC 57 1183462 1183538 TTCCCTAAACCTTCAACGTG 58 NA Drosophila melanogaster 61 Vinc FBgn0004397 FBtr0070420 1 1 1 116 X 2112121 2114416 TTGCCCAACAGGTATCTCG 59 2112023 2112041 TCACGAGATTAGCCACTGC 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 3 5 5 82 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871274 25871292 TGGGCATCAGATACTGTCC 58 NA Drosophila melanogaster 61 fd96Cb FBgn0004898 FBtr0084771 1 1 1 60 3R 20921543 20921564 CGCAGTATCAGTTATACTTCCC 58 20921583 20921603 CAAGGTATGTTGCCATATTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or94b FBgn0039034 FBtr0084342 1 1 1 149 3R 18815979 18815997 TGTCTTCGGTACCAATTGG 57 18816109 18816250 GCATTGTTGATGGTCTTCAC 57 NA Drosophila melanogaster 61 Synd FBgn0053094 FBtr0083966 1 1 1 80 3R 16661036 16661600 GATCGAGGATGGTTACAAACTC 59 16661641 16661659 TTCGCATATCCCTTCTCGA 58 NA Drosophila melanogaster 61 CG31292 FBgn0051292 FBtr0083199 1 1 1 80 3R 11732185 11732208 GCTAAAGAGATTTGTGATCGTAGG 59 11732247 11732324 TTGCTGTGGAAGTACTCGT 59 NA Nonspecific Drosophila melanogaster 61 CG9918 FBgn0038201 FBtr0100131 3 1 1 86 3R 9926579 9926597 AGGGCACTAACCAATTCCA 59 9926422 9926530 CGTCGGATTCTGCATTATCG 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0301345,FBtr0082256 2 6 8 80 3R 6340061 6346806 TCAGCATTTAACGCATCCC 58 6339999 6340017 ACTTGCAGTATCGTTAGGC 57 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 1 3 3 83 3R 5590341 5590416 AACTGAAGTATCCAACGAAGGA 59 5590460 5590478 ACTACCTCGTTGACATGGG 59 NA Drosophila melanogaster 61 CG33288 FBgn0053288 FBtr0301013 2 1 1 83 3L 21425830 21425849 AAGATGCTAAGGGATTCGTG 57 21425895 21425974 GCAGTTCATCTTCGATCCT 57 NA Drosophila melanogaster 61 CG32188 FBgn0052188 FBtr0075164 2 1 1 298 3L 17826674 17826693 TGCGCTTTCTACTAGCTCTC 59 17826395 17826413 AACTCGTACAACAACCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4893 FBgn0036616 FBtr0075425 1 1 1 146 3L 16349123 16352406 TAACAAATATCCACCATGTCCG 58 16348998 16349016 GAAGGCCTTGAACTGATCC 58 NA InUTR Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273349 1 1 2 80 3L 8639267 8639285 CAGCAGAGTGTCCAGTACC 59 8638979 8639225 GCTCCTGCAATCTTCATATCG 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 1 3 3 80 3L 1573238 1573258 ACCAGAACTTCTTCATCTGCA 59 1573300 1573555 GTGCGTAGACCTGATAGGG 59 NA Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666,FBtr0071667 3 2 2 62 2R 17558177 17558196 TATCGTATCCGAGAAACGCT 58 17558221 17558239 CTGATGTCGGGTATGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34457 FBgn0085486 FBtr0112763 2 1 1 80 2R 12558653 12558731 ACCGCAGTAAATTATCATGCC 59 12558771 12558791 GCTTTGGATTTACATGTCTGC 58 NA Drosophila melanogaster 61 CG8249 FBgn0034045 FBtr0087310 1 1 1 97 2R 11733106 11733196 TATGCTGGGTGTTGGTATGG 59 11733028 11733046 TGCCCAGTATAAGACTGCC 59 NA Drosophila melanogaster 61 CG8531 FBgn0033918 FBtr0087538 3 1 1 103 2R 10145865 10145945 TTCATCAAAGAGCGACCTG 57 10146011 10146030 TGTGAATCACTTCGAACTGG 58 NA Drosophila melanogaster 61 CG13183 FBgn0033667 FBtr0088054 3 1 1 85 2R 7793766 7793857 AAAGCTCTTCAGGGATCAC 57 7793699 7793718 CGAAGACAATTATCTTGGCC 57 NA Drosophila melanogaster 61 CG12344 FBgn0033558 FBtr0088246 1 1 1 80 2R 6720701 6721328 GATTCATACTGATGTGGCTGAG 59 6720642 6720660 TAGGCGGAAGAACTACTCG 58 NA Drosophila melanogaster 61 CG8248 FBgn0033347 FBtr0088678 1 1 1 87 2R 4807087 4807107 CATTATTTACCTGTTCGCCCT 58 4806963 4807040 TTTGTTCTGCGACTTGTAGTG 59 NA Drosophila melanogaster 61 CG4691 FBgn0028870 FBtr0080670 1 1 1 60 2L 14761164 14761185 GATCAAAGGTATACGATGCCTG 59 14761206 14761224 GAACGGCACTTGTATTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31730 FBgn0051730 FBtr0080480 1 1 1 60 2L 13259304 13259324 AGGAGCTTCCTATGTTAACCT 58 13259264 13259283 GTACAATTGATAGGCAGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7299 FBgn0032282 FBtr0080130 3 1 1 61 2L 10684285 10684303 AATGCTAACGCAAATGCCA 59 10684242 10684260 CTGAATCCTGGTCTTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4968 FBgn0032214 FBtr0079987 3 1 1 80 2L 10307482 10307565 TTTCACGAAACGTTCATGGA 59 10307608 10307626 CAACTCATCTTGGACCGTG 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 2 2 2 88 2R 19924655 19924733 TGGTCAACCGACTAACCAC 59 19924585 19924603 GACTGTTTCGCAAGTCGAG 59 NA Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829,FBtr0078828,FBtr0078830 3 3 3 60 3R 1047615 1047638 TTCTCTAAGACCGGACTAATTAGC 59 1047578 1047596 TCTCAAACTTGATGCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 2 2 2 80 2L 11511227 11511246 GTCAACGGTGTATGATGAGG 58 11510838 11511187 ACATACCTTAGAGTCTCTGCTG 59 NA Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079483 3 1 2 118 2L 7764323 7764551 CGTTTGTTTAGCATCGATAACG 58 7764630 7764648 GAGTAGGGCTGGGATATGC 59 NA InUTR Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 Aut1 FBgn0036813 FBtr0075055 2 1 1 95 3L 18742831 18742906 AGACAAAGGAAGAAATGCACAC 59 18742962 18742980 TGTCAATAGCCTCGTCGTC 59 NA Drosophila melanogaster 61 CG4563 FBgn0035006 FBtr0072355 3 1 1 84 2R 20340301 20340386 TGATTCAGATCACCGACGA 58 20340235 20340255 TTAAAGAATAGGGCAATCCGG 58 NA Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301618 1 1 2 106 X 22397614 22406457 CAAATCAGAGACCAATCTCGA 57 22397528 22397546 GTGAAGAGCTCCTGATCCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 waw FBgn0024182 FBtr0100536 3 1 1 88 X 21234551 21234569 ATCTTCCACCGTCACAAGG 59 21234620 21234697 GATCGCGAAACTTCATTGGA 59 NA Nonspecific Drosophila melanogaster 61 CG6106 FBgn0030914 FBtr0074553 2 1 1 119 X 18253030 18253104 TTATACGCAGGGTGCTACG 59 18253186 18253205 CATTGGGATCAATCAGACCG 58 NA Drosophila melanogaster 61 CG34325 FBgn0085354 FBtr0112527 2 1 1 102 X 16608993 16609101 CTTCAAGTGCAAGAAATGCA 57 16608910 16608930 GTTCCGGATTCTTTAATCGGA 58 NA InUTR Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 3 3 3 80 X 15859156 15859174 CACTTTCATCGCACATCGT 58 15859023 15859115 AAGAAGTTGTGAATTGAGCTCC 59 NA Drosophila melanogaster 61 Ranbp16 FBgn0053180 FBtr0074162 3 1 1 83 X 15823613 15823699 CTATTACCGATCGTTGAAGGA 57 15823550 15823568 AGATCATCGAACCATTGCG 58 NA Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 2 2 2 90 X 15601825 15601843 AAGGTGTCCGACGATAAGG 59 15601686 15601773 GGAAATTCACGTTCTGAACCA 59 NA Drosophila melanogaster 61 Ste:CG33239 FBgn0053239 FBtr0300088 3 1 1 110 X 13951132 13951150 TCTGATACACAGCTGGACG 59 13950980 13951058 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG34411 FBgn0085440 FBtr0300364 1 1 1 80 X 13064343 13064361 AAGTTCTGCTCAATCCGTG 58 13064115 13064301 GTCCATATAAAGGGTCCTCAG 57 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 1 3 5 196 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607538 11607556 CTCGAACTGTTTGGTGCTC 59 NA InUTR Drosophila melanogaster 61 Kmn1 FBgn0027259 FBtr0073541 1 1 1 102 X 11466155 11466231 GGACGATATCTGGGATCCT 57 11466071 11466089 CGCATGCATTACAAAGTCG 58 NA Drosophila melanogaster 61 CG11756 FBgn0030290 FBtr0073450 2 1 1 78 X 11242440 11242458 AGGGCAATCCACATCTGAC 59 11242500 11242518 TAGCTAATGGGATCCAGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1597 FBgn0030289 FBtr0290227 3 1 1 148 X 11240370 11240391 TTTCTTACGCTCAAGAAACTGC 59 11240177 11240195 TATGTGCCCAACACTTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2129 FBgn0030008 FBtr0071155 1 1 1 60 X 8040357 8040377 GGCAGAAGCATAATCAAGTGG 59 8040398 8040417 CTTGACGTAGAGATTCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10932 FBgn0029969 FBtr0071143 3 1 1 60 X 7781693 7781711 CATGTGGGAGGTCAATGAG 57 7781651 7781672 ATCCAGTTTCTTGATATTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 2 3 3 81 X 6261186 6261399 CTTTATCAACGCCCTGCAC 59 6261441 6261462 CACCTTGTACACATAGCTTTCG 59 NA Drosophila melanogaster 61 SIP3 FBgn0061196 FBtr0070727 1 1 1 60 X 4854883 4854903 GATCGAGTACCAGATGATGAG 57 4854843 4854862 ATGGCAGTATTTCCATCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0144 FBgn0027296 FBtr0070414 2 1 1 148 X 2155438 2155506 ATTTCAAAGTGCCGATGCT 58 2155308 2155326 GTAGCAGTTCCGATTGCAG 59 NA Drosophila melanogaster 61 CG4281 FBgn0025626 FBtr0070339 2 1 1 81 X 1958632 1958650 CTGACCTTGCCTATACGCA 59 1958511 1958588 GCTTGTAGAATCTGGCTGGA 59 NA Drosophila melanogaster 61 Tsp2A FBgn0024361 FBtr0070211 3 1 1 203 X 1240709 1241316 CAAGCTTCCGAAACGATGG 59 1241483 1241501 GTAGAAGGACTGTGCCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41618 FBgn0085824 FBtr0114282 1 1 1 60 U 9909771 9909791 TAAATGGTTGCCAAACAGCTC 59 9909810 9909831 GGGACACAATATCATATGCCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40728 FBgn0085769 FBtr0114219 3 1 1 60 U 9902226 9902246 TTATTTACGTGAGGTCTCCGG 59 9902186 9902205 GAATCATCCAGTAACACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40594 FBgn0085752 FBtr0114202 1 1 1 154 U 8836272 8836290 ATAGGTAGGCAGTGGTTGC 59 8836408 8836426 TTCCTATTATCCGCGGAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40976 FBgn0085780 FBtr0114231 1 1 1 74 U 3657297 3657315 ATACCCGCTTTGAGGACAG 59 3657241 3657259 TTTCGAACAATGCGAGGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40245 FBgn0058245 FBtr0302520 2 1 1 60 U 688309 688330 ACTTGAGAAACTTTACTCGTCG 58 688270 688288 TTCATCGATGCCAACATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 3 5 5 81 4 1230676 1230694 CCAAGTAGCTCAAGTGGCT 59 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 Cyp4c3 FBgn0015032 FBtr0085712 1 1 1 85 3R 26725499 26725580 TTTCTAATGAGGACATTCGCG 58 26725627 26725645 TAGTGTCCAGGAAATGGCC 59 NA Drosophila melanogaster 61 CG31016 FBgn0051016 FBtr0300962 3 1 1 80 3R 26433638 26433658 GTCCTACGACTACGATACACG 59 26433700 26433784 ATCCAGCGTGTCATTACCA 59 NA Drosophila melanogaster 61 PH4alphaNE1 FBgn0039780 FBtr0085688 2 1 1 81 3R 26325809 26325831 GTATCTTACAAGGGAACTGAGGT 59 26324897 26325768 GATGGAGGATAGCTCGCTC 59 NA Drosophila melanogaster 61 CecA1 FBgn0000276 FBtr0085612 3 1 1 150 3R 26036721 26036739 ATTGGACAATCGGAAGCTG 58 26036914 26036932 ATCATCGTGGTCAACCTCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Sry-beta FBgn0003511 FBtr0085556 2 1 1 80 3R 25865600 25865672 GATAGAAGGCTGCATTGTGC 59 25865713 25865733 CGCTGGTTTATGATCTTCTCG 59 NA Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531,FBtr0085532 2 2 2 60 3R 25643315 25643334 TCCGTACATAGTGTCCATCC 58 25643274 25643293 ATTTATTATGGAGCCGCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk20 FBgn0039676 FBtr0085466 3 1 1 80 3R 25492796 25492866 GATCTAATTGCCAATCTGGGTG 59 25492737 25492758 GTAGTAGATCAACTCGAAGGCA 59 NA Drosophila melanogaster 61 Mst98Cb FBgn0004171 FBtr0085278 2 1 1 76 3R 24118812 24118830 AGAAACGCGTTGTGTTCAC 59 24118870 24118888 TGGAATGGTGATCTGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 3 2 2 82 3R 23455225 23455303 TAGATCGGATGTTATCCTGGTC 59 23455346 23455364 ACACAAAGATGATGCCCGA 59 NA Drosophila melanogaster 61 Gr98d FBgn0046885 FBtr0085188 1 1 1 80 3R 23372577 23372598 ACTGACCATTCTGCAAATTGTC 59 23372639 23372717 CCAACGCGCCTATATTGAC 59 NA Drosophila melanogaster 61 pll FBgn0010441 FBtr0085179 3 1 1 92 3R 23077699 23077717 GTTTACGAGCGCATAAGGC 59 23077562 23077643 AGTAGATGCCTCTAGCCGT 59 NA Drosophila melanogaster 61 Tb FBgn0243586 FBtr0085036 3 1 1 72 3R 22482241 22482259 GGCTATCAATATGCGTGGA 57 22482355 22482374 GTTATAGCCGCCTACATCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12290 FBgn0039419 FBtr0084990 2 1 1 60 3R 22058320 22058338 CTGTTTGGTCTGGATTCGT 57 22058362 22058380 TGGTCTTTACACTGCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31324 FBgn0051324 FBtr0084985 1 1 1 118 3R 21950270 21950288 CATTTCATCAGCATCCGCA 59 21950370 21954734 CTTTGGCCACATGGTTGAG 59 NA Nonspecific Drosophila melanogaster 61 CG42261 FBgn0259146 FBtr0299575 3 1 1 81 3R 21803790 21803875 GGCCATTCAGAAACTAGCC 58 21803920 21803938 GCTGTCGTTCTTGGTATCC 58 NA Drosophila melanogaster 61 rha FBgn0027376 FBtr0084832 3 1 1 85 3R 21170195 21170277 TAGAGTCGAACCCATTGACC 59 21170325 21170343 CATTCTGGCGAAACTGTCC 59 NA Drosophila melanogaster 61 CG31436 FBgn0051436 FBtr0084830 2 1 1 83 3R 21130481 21130551 GCAGAATGAGCAACCAGAG 58 21130594 21130616 CTCATAAAGGGATCATTCAGGAC 58 NA Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204,FBtr0084774 3 2 2 60 3R 20926556 20926574 GGGCTGTTTGGTGTATCCT 59 20926595 20926616 CAAGCTGTTCTTAATATGCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 2 2 2 80 3R 20749880 20749899 AGAGTCCTATTGAGGTTGCC 59 20749942 20750012 GCCGGTTATTGACATTGGT 58 NA Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 1 2 2 80 3R 20749881 20749900 GAGTCCTATTGAGGTTGCCA 59 20749943 20750013 CGCCGGTTATTGACATTGG 59 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0111008,FBtr0084603 3 2 2 80 3R 20135393 20135414 GCGAGATCAACATTAATGAGTG 58 20135454 20135538 AGGTATAGGTTCCAATCCCG 58 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 2 2 2 90 3R 19769945 19769963 TTCTGCGTCATCTTCTTCC 57 19769815 19769893 GGACATTGAGTAAGAATGGCT 58 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 1 2 2 80 3R 19721216 19721947 CAGAAGGATACGAGAAAGAGC 58 19721156 19721176 GTTATCCAACTCAGTCATTGC 57 NA Drosophila melanogaster 61 CG31468 FBgn0047351 FBtr0084473 3 1 1 74 3R 19525910 19525928 AAAGCATGTCGTGCAATCG 59 19525794 19525813 TCTTAAACCCAAAGGTGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 3 2 2 103 3R 18981603 18981621 CCGGAGATCTACAAGTCGA 58 18980677 18981536 TCCATTGAGCAAGGTTCCA 59 NA Drosophila melanogaster 61 glec FBgn0015229 FBtr0084157 3 1 1 134 3R 17681228 17681246 CGCAAAGCTGATCCTTCAG 59 17677589 17681130 TTGTACATGCCTTTGAGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7718 FBgn0038649 FBtr0083682 3 1 1 174 3R 14570595 14570613 CATTCATCACGACAGCGTG 59 14570381 14570457 AAAGCCGTTTGCATTTGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG31231 FBgn0051231 FBtr0083662 2 1 1 93 3R 14492640 14492659 GATCTTCGCAACCAGATCAG 58 14492712 14492801 GCTCGAATTTCATCACTTTCTC 58 NA Drosophila melanogaster 61 CG5614 FBgn0038359 FBtr0083171 2 1 1 60 3R 11605813 11605832 CCAATCAATCGGAGGATCAC 58 11605852 11605873 AGGAACTCCATAATCATCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34273 FBgn0085302 FBtr0112468 2 1 1 62 3R 10342860 10342878 AATCGAGTACCAGCACCAC 59 10342903 10342922 ACGATGTGGTAGACTCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mus308 FBgn0002905 FBtr0082662 3 1 1 80 3R 8535214 8535294 CATAAGCGTTTCTACATAGCTC 57 8535155 8535174 CTTATACTTGTGGACCACGA 57 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 1 2 3 80 3R 8228190 8228264 GAGGGCATTGGAAGTTGTG 59 8228308 8228326 GAACTTTCGATCCGTGCTC 59 NA Drosophila melanogaster 61 GstD4 FBgn0010040 FBtr0082571 3 1 1 60 3R 8200201 8200224 GAAGTACTATTACCCATTCATCCG 59 8200238 8200261 CTTCTTATAATTCTCGGCATTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4830 FBgn0037996 FBtr0082625 3 1 1 80 3R 8035483 8035616 TCGAGGAATCTACTCTTAAGCA 58 8035424 8035442 GTTTGTCGTAGTGATCGGC 59 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 2 3 3 95 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595739 7595757 GGTGTGACGAGTAGTCCAC 59 NA Drosophila melanogaster 61 CG14711 FBgn0037922 FBtr0082416 2 1 1 60 3R 7449973 7449994 ATTCATATGCGTCGTCATATGG 58 7450014 7450095 AGGATTTGCTGCATATTTCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14711 FBgn0037922 FBtr0082416 1 1 1 80 3R 7449435 7449512 CCAATGTAGTCAAGGCCGA 59 7449553 7449574 AGATGTACTCAATGTTGTCAGC 58 NA Nonspecific Drosophila melanogaster 61 CG6672 FBgn0037875 FBtr0082371 3 1 1 117 3R 7039589 7039678 ACAGTTTGGGCCTGATCTC 59 7039490 7039508 CCGTAGGAGAACTTGTCGT 59 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 2 2 4 170 3R 6610563 6610582 GTAGAGATGTCTTCGGGTCG 59 6611949 6611967 ATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6465 FBgn0037818 FBtr0082323 2 1 1 90 3R 6501688 6501706 AGAAGCAACCTAAAGTCCC 57 6501558 6501635 GATATGTGCATCTCATCGGT 57 NA Drosophila melanogaster 61 Invadolysin FBgn0086359 FBtr0082181 2 1 1 90 3R 5981457 5981556 TGATAAATGACACCGTTCTCC 58 5981607 5981626 CTATTGAGTCGGATAACGCC 58 NA Drosophila melanogaster 61 CG31415 FBgn0051415 FBtr0082127 3 1 1 82 3R 5569293 5569311 CCAATACTCCAACCAGCAG 58 5569357 5569801 ACATGTTGAGCCTTCAACG 58 NA InUTR Drosophila melanogaster 61 CG8199 FBgn0037709 FBtr0082067 2 1 1 80 3R 5381654 5381735 CACCTGAAAGTGATTGAAGGAG 59 5381774 5381794 GAAATTGGCGTAATCTTCCGA 59 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 2 4 4 110 3R 4547247 4547265 ACTCAAGCCATCTCCATGG 59 4547408 4547426 GAGTCGAATGTCTCCTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0114520,FBtr0081756 1 2 2 60 3R 3733513 3733531 AGAGCCAGTTTATCATGCG 58 3733619 3733637 TTTATTGCCTCATGGACCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32468 FBgn0052468 FBtr0081592 1 1 1 87 3R 3140509 3140527 TTTCCATAGTCGGGCAGTG 59 3139402 3140459 ACATGTTGTATACTTCGCGC 59 NA Drosophila melanogaster 61 CG10032 FBgn0037493 FBtr0081579 3 1 1 78 3R 3097871 3097889 AACAGGAGGTGATGGTCTG 59 3098036 3098054 GCAGACAACCGTAAACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Os-E FBgn0010403 FBtr0078655 1 1 1 81 3R 1802253 1802323 TACTGATGAGGCCATCAAGG 59 1802191 1802212 GAAGAGGCAGTTCATATAGCAC 59 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 1 2 2 80 3R 1395126 1395144 ATCGTCGCTATGCATACAG 57 1395187 1395309 ATCTTGGTGAAGGTGTTCTC 57 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0299709,FBtr0300525 1 3 3 80 3R 1028996 1029015 AGTACGCTCAGTGATACAGC 59 1028870 1028953 AAGAGCAGGTTCTCGTCTG 59 NA Drosophila melanogaster 61 CG32445 FBgn0052445 FBtr0078425 1 1 1 60 3L 21632900 21632918 GATAGGCATCACCAGAACG 58 21632942 21632960 CTACCACGTCCCAGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33284 FBgn0053284 FBtr0078291 2 1 1 60 3L 21117590 21117610 TAAGTCTAGATTGCCAGTTGG 57 21117632 21117650 TCCGTTAGCTCGTTAGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14095 FBgn0036870 FBtr0074987 3 1 1 193 3L 19457700 19457789 TGTTCAAATACGCCGTTGTC 59 19457526 19457544 AACTTGGGCAATCACTGGA 59 NA Nonspecific Drosophila melanogaster 61 GNBP1 FBgn0040323 FBtr0075050 1 1 1 80 3L 18670109 18670127 ACCAAGGAAACCTTTGCCT 59 18670168 18670253 GAGTGGTACTATCCAATCTCCC 59 NA Drosophila melanogaster 61 CG32191 FBgn0052191 FBtr0075168 1 1 1 94 3L 17800862 17800949 ATATGCAGCGATGATCTCC 57 17800786 17800807 AGATCACTATGCTATTCTCCAG 57 NA Drosophila melanogaster 61 CG16793 FBgn0036712 FBtr0075242 1 1 1 80 3L 17335848 17335949 CTGCATGTGGTACTCAATGG 59 17335787 17335808 AAGATCCCTAGAATACGACCTC 58 NA Drosophila melanogaster 61 CG14059 FBgn0036690 FBtr0290221 2 1 1 188 3L 17023381 17023823 TGAATCGACTTGGATCCGG 59 17023211 17023229 AGTGATCCCTCTTGAAGCG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 1 4 4 86 3L 16784737 16784755 GATTCGATGTGGTTGTGGC 59 16784613 16784687 TCATAGTGCAGCCCATGAC 59 NA Drosophila melanogaster 61 BobA FBgn0040487 FBtr0075673 1 1 1 98 3L 14939036 14939054 AAGAACTCCAAGCCTTCGA 59 14938956 14938974 CTCCAGTTGTTCGTTGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SNCF FBgn0036349 FBtr0075840 3 1 1 86 3L 13371893 13371911 CAACTCTTCTTGTACCGCC 58 13371961 13371979 GGTAAGCACTATCTTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gap69C FBgn0020655 FBtr0075981 1 1 1 99 3L 12409089 12409382 CGACAAAGATTAAAGAGGGAACTC 59 12408938 12408957 TTATTCCAACCTCGTTTGCC 58 NA Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 1 1 1 123 3L 12185119 12185137 CTTCACCGAAAGTATGGCA 57 12185224 12185298 CATCTCCGTGGACAGTACC 59 NA DesignNoJunction Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999,FBtr0075998 2 2 2 80 3L 12146778 12146799 TGTGAACTTGAATCTCGATGTG 59 12146839 12147060 CGTCCATCCGAGTAGAACTC 59 NA Drosophila melanogaster 61 CG14151 FBgn0036089 FBtr0076280 3 1 1 123 3L 10621376 10621454 GTATTTGCCAGGCATGGTC 59 10621271 10621289 AGAATCGTACCAGTCCCAG 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 3 12 12 88 3L 9773788 9773875 TCCTCATGAGATCTTTGTGC 57 9773926 9773944 CATACTTGATCCAACGGGC 58 NA Drosophila melanogaster 61 CG4022 FBgn0035986 FBtr0076486 3 1 1 100 3L 9402427 9402445 AAAGATCCTGAGGAGCGAC 59 9402274 9402365 TTGAGTATTACGGCGTTTCTG 58 NA Drosophila melanogaster 61 CG5978 FBgn0035916 FBtr0076648 1 1 1 126 3L 8616640 8616716 CATTTAATGGTGTGCCCGA 58 8616532 8616550 TGTTTATACAGGGCTCGCT 58 NA Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076764 2 1 2 111 3L 7968939 7968958 AGATGCATTGTACGTGTAGC 58 7968773 7968865 GATCGCTGCCACTATTCTC 58 NA Drosophila melanogaster 61 CG32376 FBgn0052376 FBtr0076827 1 1 1 60 3L 7535526 7535544 TCGGATCAGAAAGTGAGGG 58 7535484 7535507 TTGTCCTTATAGTATCCTGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13287 FBgn0035643 FBtr0077027 2 1 1 60 3L 5875644 5875664 TAACAACAATGAGACACCCAC 58 5875686 5875704 GAAGGCGCGTTTAAGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bre1 FBgn0086694 FBtr0077116 1 1 1 80 3L 5785847 5785865 GAGCTGGATAAGCTTCACG 58 5785671 5785803 CGGCAACTGTCGTATATCC 58 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 2 3 3 94 3L 5338822 5338840 CTTATCCGGATTGGGTGCA 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 VhaM9.7-1 FBgn0028664 FBtr0073256 3 1 1 106 3L 4186683 4186702 ATTCTGTTCACCAAGCAACC 59 4186596 4186614 TTCAGTTGCGCCAAATAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JTBR FBgn0025820 FBtr0072788 1 1 1 60 3L 1802438 1802456 ATTCACACGCACTACAAGG 58 1802396 1802414 AGCTCCTGGTTACGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dlt FBgn0024510 FBtr0072790 3 1 1 141 3L 1793498 1795214 AGATTGCCATCAAAGTGGA 57 1793375 1793396 TTCGTCATTTCTGTATCTGACG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 5SrRNA:CR33391 FBgn0053391 FBtr0086383 1 1 1 60 2R 15639695 15639713 ATACATCGGTTCTCGTCCG 59 15639653 15639671 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33434 FBgn0053434 FBtr0086426 1 1 1 60 2R 15623847 15623865 ATACATCGGTTCTCGTCCG 59 15623805 15623823 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 2 4 4 80 2R 19940649 19940730 GATCTAATAGTCGGCATCGG 57 19940588 19940609 GTACGAAATGATCTCCAGTAGG 58 NA Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 2 1 1 111 2R 18841030 18841048 GAAATCTTGACGGTAGCGA 57 18839576 18840956 AAACAATGTTGATCCGACGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3927 FBgn0034739 FBtr0071853 2 1 1 82 2R 18483169 18483187 GGAGCCATCAGGAATAGGG 59 18483233 18483378 TCCATATAGGCGACTTCGC 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0301760 3 4 5 139 2R 16483157 16483269 ATTCCGAGCAGTATTGCTG 58 16485963 16485984 TCTATATCCGCCGATATTTGGA 58 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495,FBtr0100496 2 2 2 61 2R 16439430 16439450 CGAGTCTAAGAAGCGATTGTG 59 16439322 16439410 CCACAGAACCCAAATTATTTGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34199 FBgn0085228 FBtr0112392 2 1 1 128 2R 16175136 16175213 TGACAAAGTTGCTTCTACTGC 59 16175302 16175321 CGTTGGGTAAGTTGAATGGA 58 NA Drosophila melanogaster 61 CG15128 FBgn0034467 FBtr0086481 1 1 1 80 2R 15574198 15574219 CAGACACATCGTAACATGAACC 59 15574052 15574157 TTTCGCCAATTGCTGAACC 59 NA Drosophila melanogaster 61 CG34198 FBgn0085227 FBtr0112391 2 1 1 126 2R 15570407 15570426 AACCGGATTACAACCAATCG 58 15570300 15570318 GTTATCCTTGGGAGGAGGC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG7461 FBgn0034432 FBtr0300283 3 1 1 60 2R 15193940 15193960 CGAGGCTATACAAATTCTGGG 58 15193979 15194000 GACTCGTTCCAATCCATTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 1 1 1 67 2R 13557816 13557892 TATCAGGAGTGCGTCAAGC 59 13557923 13557941 TACTCAGATCCGACCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 eIF2B-gamma FBgn0034029 FBtr0087336 3 1 1 87 2R 11430402 11430476 CTTTACAGAGGTCATTGTTGTG 57 11430523 11430542 CAGTCTCAGCTTTAAGGGAG 57 NA Drosophila melanogaster 61 Dh44-R1 FBgn0033932 FBtr0087485 1 1 1 80 2R 10271645 10271730 TCAGCACTCAGGGATTCTC 58 10271774 10271792 AAATGTGGTGTCTCAGTGC 58 NA Drosophila melanogaster 61 CG13344 FBgn0033884 FBtr0087586 2 1 1 96 2R 9749528 9749547 TTTCAGGTGTCTCAAATCGA 57 9749606 9749686 ACTTCGTCTTGTAAAGCGT 57 NA InUTR Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 1 1 1 191 2R 9725537 9725996 TCTCCGAATTTGGCGAGAG 59 9726151 9726169 ATAGATGTCCTTCGAGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34236 FBgn0085265 FBtr0301011 3 1 1 81 2R 9492693 9492787 AACTGCTGGCTGAAATTCC 58 9492630 9492649 GTTTCCGTGTGAATGTTCGA 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0301395,FBtr0087703 2 6 6 94 2R 9332189 9332277 CCTATCAGATGGCGGAGTC 59 9332113 9332131 CTCCAATCTCTGCACCTCC 59 NA Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 3 1 1 62 2R 8433566 8433645 CCTTACAACGTAAGTGAATCATACC 60 8433663 8433683 TGTATCGGTCAAGACAAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087958 3 1 4 80 2R 8229273 8231976 CTCTGTGTAGCAATAACACATGG 59 8229215 8229236 GCTACTAGGACTCAGAATTGGA 59 NA InUTR Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987,FBtr0087988 3 2 2 168 2R 8064066 8064084 CAACCACCTGTTGCTTCAG 59 8064216 8064293 TGTTCCGAATGCCATTTCG 59 NA Nonspecific Drosophila melanogaster 61 Buffy FBgn0040491 FBtr0088077 1 1 1 103 2R 7575232 7575326 CATTTCTCAGGGTCGTTGC 59 7575393 7575411 GTATGCTACGTATGCGCTG 59 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 3 3 3 99 2R 7469204 7469222 GGACAAGTTGCTACTGTGC 59 7468894 7469141 GTAGCAGTACCAATCGCCA 59 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 1 3 3 96 2R 7469201 7469219 CAAGTTGCTACTGTGCGAC 59 7468894 7469141 GTAGCAGTACCAATCGCCA 59 NA Drosophila melanogaster 61 CG7222 FBgn0033551 FBtr0088223 1 1 1 80 2R 6701651 6701670 GGTAATGAAGAGCTACTGCC 58 6701708 6701799 GTTGATCCAGTACATATCGTAGAC 58 NA Drosophila melanogaster 61 CG1418 FBgn0033468 FBtr0088440 1 1 1 91 2R 5851818 5851889 TATACTGCCTCATCACGGC 59 5851745 5851763 AATGTTACTGTTGCGCACG 59 NA Drosophila melanogaster 61 sec24 FBgn0033460 FBtr0088451 1 1 1 80 2R 5764734 5764817 GCAGATAATTAGGGACACGAG 58 5764674 5764694 GACAAACTAGATTCACTGCGA 58 NA Drosophila melanogaster 61 CG1809 FBgn0033423 FBtr0088520 2 1 1 84 2R 5450837 5450855 TTACCTCCGAGGATGACAC 58 5450901 5450989 TGGTCACGATAAGGATAACCA 58 NA Drosophila melanogaster 61 Vang FBgn0015838 FBtr0088566 2 1 1 117 2R 4991313 4991398 ATATGACAGGAGACGGCAG 59 4991479 4991497 CTTTGCTCCGAGGTATTCC 58 NA Drosophila melanogaster 61 CG8690 FBgn0033297 FBtr0088752 2 1 1 99 2R 4360499 4360517 GAGCAAAGCGGTCTTTCTG 59 4360578 4360655 GATTTCCTAGCACCCAATTGG 59 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 1 3 3 80 2R 3858089 3858108 AACAAGTGGCTACATATGGG 57 3857971 3858049 GTAGATGACCATATGCGTATCC 58 NA Drosophila melanogaster 61 CG8791 FBgn0033234 FBtr0088849 2 1 1 83 2R 3816245 3816263 TTACAGCCAGCAGGATCAG 59 3816309 3816390 CAGGCATAGACTGACTGGAG 59 NA Drosophila melanogaster 61 CG30494 FBgn0027604 FBtr0088918 1 1 1 60 2R 3531279 3531297 GTTACGTTCCAGGCAAACC 59 3531318 3531339 CTACAGCAACTTCTACACATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1598 FBgn0033191 FBtr0088955 2 1 1 91 2R 3426863 3426883 ATCCGTGCTAATCATATCCAC 57 3426708 3426810 AGCCATTTACCTTTGTCGG 58 NA Drosophila melanogaster 61 Inos FBgn0025885 FBtr0089329 1 1 1 109 2R 3343263 3343346 CCAAGGAGATTTCCAAGAGC 58 3343173 3343191 GGGCACGTACTTGATTACC 58 NA Drosophila melanogaster 61 Spn43Ad FBgn0044011 FBtr0089053 3 1 1 99 2R 3041583 3041601 TCTCCTGGAGCTACAGGAG 59 3041445 3041463 GAACGGGTGATTGATGACC 58 NA DesignNoJunction Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 3 4 5 83 2R 2503182 2503200 GGGAGCTGGAAGCTATCTC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 3 1 1 67 2R 2090869 2091539 TTTGAAAGCCTGGACTTCCA 59 2091569 2091587 GACGATTCCCAGTACGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL38 FBgn0040007 FBtr0111120 2 1 1 264 2R 403814 403891 TGGATTAATATGCCACGGGA 59 403569 403592 CCTTAGCAGTAGAAATATTGAGGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 snoRNA:Psi18S-525i FBgn0083030 FBtr0113553 3 1 1 66 2L 20421645 20421666 ACTTACCCTAAATCTGTGTCTC 57 20421691 20421711 TTATTCAGGATGCCGATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33822 FBgn0053822 FBtr0091826 1 1 1 60 2L 21466431 21466450 AGTTGAGAAGAAAGTGGTCC 57 21466473 21466491 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33804 FBgn0053804 FBtr0091808 1 1 1 60 2L 21427131 21427150 AGTTGAGAAGAAAGTGGTCC 57 21427173 21427191 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 3 2 2 80 2L 21158236 21158316 TGAATGAGATTAGGGTTCCCT 58 21158176 21158196 TGGTGGTATTTACGTAACCTG 57 NA Drosophila melanogaster 61 CG14397 FBgn0032914 FBtr0300444 1 1 1 81 2L 21094630 21094713 AGGAGGTGGTTTATGACCG 59 21094756 21094776 GGTATCAAACCAGCATGAGAC 59 NA Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 3 2 2 80 2L 18535124 18535201 AACTCCTTCCAGATTAAAGCCT 59 18535065 18535086 CTGATCAAAGTGATGATGCTCC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 2 5 5 150 2L 18320723 18383413 CTTAACAGATGCACTCACCT 57 18383526 18383544 GTTGAGTACCTTCTGCTCG 58 NA Drosophila melanogaster 61 GABA-B-R1 FBgn0260446 FBtr0080697 1 1 1 80 2L 15030676 15030755 TTGTGCCAAAGGTCATTGAG 59 15030798 15030816 TCGATATGGCTGAATCGGG 59 NA Drosophila melanogaster 61 CG4650 FBgn0032549 FBtr0301695 1 1 1 80 2L 14774617 14774694 CCAGCGAACAATTAGTAGCTC 59 14774557 14774579 CTTGGTACTCTGATAACATCGTG 59 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 1 2 2 80 2L 14364281 14364381 GACTTTAAGAAAGAGGAGTGCA 58 14364420 14364440 CACAGAGCGAATATAAGTGCT 58 NA Drosophila melanogaster 61 nimC1 FBgn0259896 FBtr0080615 2 1 1 80 2L 13975874 13976491 TATACAGACGAAGAGACTGCC 59 13975814 13975832 GCAGTTCTCAACGGATCCT 59 NA Drosophila melanogaster 61 CG33642 FBgn0053642 FBtr0091619 2 1 1 98 2L 13530288 13530307 AAACATCTCACCGAAATGGT 58 13530365 13530446 AGTTGAAGTTCGTTCTTAGAGG 58 NA Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0080467 2 1 2 81 2L 13369308 13369391 CAAAGATTAAAGTGAGCAACCC 58 13369432 13369451 ATTGCTCGAATCGTGTATGG 59 NA InUTR Drosophila melanogaster 61 CG16826 FBgn0032505 FBtr0080464 1 1 1 60 2L 13348234 13348258 GAATAACCTCAATGATCGGATAGAC 59 13348271 13348294 CTTCTGGATTATGGCGAAATACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16824 FBgn0040973 FBtr0113336 2 1 1 69 2L 13293223 13293242 AAGAAGGGACCTCTTCTTGG 59 13293274 13293292 ATGAAGGTGTGGCAATGGA 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 1 2 2 80 2L 13300856 13300936 GTGTTACATGAGTATTTCGACTGG 59 13300974 13300993 GGAGACCAGAGTGATGAGAG 59 NA Drosophila melanogaster 61 CG9426 FBgn0032485 FBtr0080484 1 1 1 80 2L 13217718 13217738 GGGTCTCATTTACATTGTCGG 59 13217599 13217678 TTTGTCACTGGATTGAAGCTG 59 NA Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080396,FBtr0080395 3 2 2 89 2L 12696302 12696320 CAAAGGATCAGAGCAACCT 57 12696373 12697478 TTCCATCGAAGATCTGCAC 57 NA Drosophila melanogaster 61 CG31867 FBgn0051867 FBtr0080224 1 1 1 60 2L 11144799 11144817 ACATTCACAGCAGAGACCA 59 11144757 11144777 CCGAGAAGTTCATTGATTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6094 FBgn0032261 FBtr0080091 3 1 1 88 2L 10507326 10507344 CGACTGCAAATCTACACGC 59 10507459 10507477 TAGGTGATCTCCAGTCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089735,FBtr0089737,FBtr0089736 2 4 4 147 2L 10264209 10264230 TGGCTGATATGGAGATACAGAG 59 10264625 10264773 CTGCTGCGTTCTAGTTTGG 59 NA Drosophila melanogaster 61 CG17855 FBgn0032124 FBtr0079830 1 1 1 80 2L 9541201 9541221 CTTCAAAGAGCCCTTGATGAG 59 9541261 9541335 CATTTCCAGTAATTCCACGCT 59 NA Drosophila melanogaster 61 LKR FBgn0025687 FBtr0079495 1 1 1 99 2L 7795645 7795785 GACAACGTCATAGTCGAGTG 58 7795565 7795583 TTGACCAACTTCTGGACGT 59 NA Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 3 1 1 60 2L 7783044 7783313 TGAAGAATACAGTCAGCACC 57 7783333 7783354 AAGGATAAGCTTTAGACCTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247,FBtr0300327,FBtr0273248,FBtr0273250 1 4 4 80 2L 6682192 6682211 GACGTAAACCTATATGCGCT 58 6682075 6682149 TTGAATGGCTCCACTAAGG 57 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 2 2 2 81 2L 6457105 6457351 TTCTTACAGGTCCCTATTATCGG 59 6457392 6457410 TCAACAGTTGGAGCGTAGG 59 NA Drosophila melanogaster 61 CG31642 FBgn0051642 FBtr0079199 1 1 1 230 2L 6118532 6118552 GGTGTTCATCAGTTGAAAGTG 58 6118805 6118823 TATCTTGCAGTTCTCGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sip1 FBgn0024191 FBtr0079134 1 1 1 82 2L 5721172 5721192 GACTACGATCTGGACAATGAG 58 5721235 5721305 GCCCAAATACCGTAGATCTG 58 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 3 4 4 99 2L 5719427 5719526 AAATGGTGGTATCACGTTGG 58 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 CG14007 FBgn0031731 FBtr0113023 3 1 1 81 2L 5716267 5716288 GCATTTGTCCACGTAATATCCT 59 5716147 5716228 ACCATTTCCGTAACTTAATGGC 59 NA Drosophila melanogaster 61 CG8891 FBgn0031663 FBtr0079048 2 1 1 92 2L 4978702 4978788 GGGACTTTGGATGGGATCC 59 4978628 4978649 GATGGGAAATGGTGTTCTTCTC 59 NA Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 3 1 1 62 2L 4968473 4968491 ACTGCCCGGATATTTGTCC 59 4968366 4968448 TTTCAACTTCATCGACGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17264 FBgn0031490 FBtr0077647 3 1 1 80 2L 3019864 3019882 TCTTCAGCATAGGTGGTGG 59 3019925 3020001 CCACATCGTAGTACAAGTGC 58 NA Drosophila melanogaster 61 CG15357 FBgn0040719 FBtr0077871 3 1 1 60 2L 1945371 1945393 GAAGATATAACCATGTTCGAGCC 59 1945333 1945353 CTGTAGAACAAAGTGGATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsp1beta FBgn0002563 FBtr0078025 3 1 1 115 2L 898835 898854 AGCAGAAGTTCCTCTTCGAG 59 898929 899018 GTCGTAGTGAGTGTAGTAGGAC 59 NA Drosophila melanogaster 61 CG13949 FBgn0031288 FBtr0078017 2 1 1 165 2L 855798 855873 CAACACCTTGAAGGCTCTG 58 856002 856020 GTTGTCTGGGTTCTTCGGA 59 NA Drosophila melanogaster 61 lectin-21Cb FBgn0040106 FBtr0078046 1 1 1 92 2L 621126 621478 GATCGATTATCCGCAGGGT 59 621052 621070 TCGACCAGGCTGAATTCTC 59 NA Drosophila melanogaster 61 CG31920 FBgn0051920 FBtr0078097 2 1 1 80 2L 328642 328660 CAGGGATCCCAAAGATCCA 58 326049 328601 CAACCACAAACTTCATCTCCTC 59 NA Drosophila melanogaster 61 CG11617 FBgn0031232 FBtr0078146 3 1 1 103 2L 205203 205280 TATGACCAGGCAGAAAGCT 58 205118 205137 TATGATGAAGCATCCAGCGT 59 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 1 3 3 127 2L 75002 75079 TCTGTAAACTGCGAGAGGT 58 75168 75188 CAAATGTCCTGTACTTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 1 3 5 107 2L 836546 836564 CCCATCTACAATGCAGTGG 58 835459 835477 AAGAGCGGCATATCGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 2 1 2 121 2L 1344490 1344508 AAGAGCCGGATAGACAGAG 58 1344647 1344665 ATCTCCTCGCTCATGTCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926 1 1 2 97 2L 1368393 1368411 GACACCGAGATTTACCTGC 58 1368472 1368540 GTTGGATCCGGATTGAACC 58 NA Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 3 1 1 65 2L 1883757 1883775 GAATCTAAATGCCACCGCG 59 1883160 1883179 CTGAGCTTCTGCATATTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 3 2 2 80 2L 2579792 2579876 TACCTGAAGCTCTATAGGAACG 59 2579733 2579751 CTCGAAGTACTTGTTGCCG 59 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 2 2 4 151 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741233 2741251 GTTGGTGAAGGTGAACTCC 58 NA Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 3 1 1 68 2L 2845531 2845549 AGTTGCTGTCACAGTTCTC 57 2845420 2845439 ATTGGGATTACTCTTGCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071 2 1 2 81 2L 4401758 4401875 CTATAAGAAAGGAATCGCCGA 57 4401917 4401936 GTGATCATGATTGTGTCCCT 57 NA Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 3 2 2 85 2L 5039692 5039710 CTACAAGGATGGCAAGTGC 58 5039827 5039845 CAGTAGAGCATACGATGGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 2 2 8 93 2L 5068386 5070108 AACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 3 3 3 116 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044243 6044262 TTATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 2 3 3 87 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095143 6095248 GTAGAGCGGATTCATATTTGGG 59 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 2 3 3 83 2L 6325594 6325724 AGCATGGATAGTCTTACCGTG 59 6325769 6325787 TTCCACATCTTCCTCGCTG 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511 3 1 5 86 2L 7697151 7698738 TCCTTACAACACTGAAAGACG 58 7697085 7697103 GATCCAGCAACTGTTACGC 59 NA Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 2 2 2 80 2L 8367719 8367805 CAGGATGATCAGGACTCTGTC 59 8367847 8367865 TACATCATCCTGAGGCAGC 59 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 3 4 4 80 2L 9154697 9154715 GACAGGACCCATTAAACGC 58 9154759 9156509 AGCACAAAGTATCGCTCCT 59 NA Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 1 2 2 87 2L 10152774 10152792 CCTCATCTATGTCCGTCCC 59 10152843 10152967 TATGAGATTGCGTGTGCCT 59 NA Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 1 2 2 80 2L 10225332 10225350 TATGCTAGCAGAAGTGGGT 58 10225141 10225289 CCGAACATGCTGGAATAGTC 58 NA Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 3 2 2 81 2L 10229759 10229777 CAGTGAACCAGAATGGTGG 58 10229603 10229716 CATCCAATTCCCAACAAATGC 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 2 2 4 89 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264881 10264956 ATTGAATTAACGACGCGCT 58 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819 1 1 2 80 2L 10646494 10646513 CAGCAACTCTCAGAAATGGA 57 10646552 10648663 GTATTATCCAAGATGTCCTCCTG 58 NA Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 2 1 1 85 2L 12427508 12427526 GAACTACTCCCTGAACAGC 57 12427360 12427378 CCTGAACGTTCTGCAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 1 2 17 91 2L 12736802 12737965 CAAGTATTCCGGGTTCTGG 57 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 1 3 9 80 2L 13274314 13274338 GTATCATACCGATAACTCTAGAGCA 59 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 1 2 2 70 2L 13668755 13668773 ATATTCCGTCCGGAACTGG 59 13668864 13668883 ACATAGTCCTCCACAGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 1 2 2 80 2L 13794615 13794901 GGAGATCATATCAGCTGCCT 59 13794941 13794962 TTTCCATTAAGTGTTGGCTCTG 59 NA Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 2 1 1 76 2L 14040737 14040757 AAAGAAGAGACGGACAAAGAG 58 14040403 14040421 GTGTGCGTGTGGTTAAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 3 2 3 91 2L 14392292 14392310 ACTATGTGAAGGCTCTGCA 58 14391989 14392237 ATTTAACCCAACGGGTGGA 59 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 1 2 2 188 2L 15895693 15895767 CGAGTCATACTTTGTCGAAGAG 59 15895916 15895934 CGCCAGAAGGATTGAATGC 59 NA InUTR Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080906 3 2 16 91 2L 16774848 16775219 GATCTTCGAGTACAACGGC 58 16775272 16775292 CCATGACGAACATGATATGGT 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 2 4 12 113 2L 17717920 17717940 TAGTATACAGCCTGACTGCTC 58 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 1 2 2 82 2L 18141799 18141817 GTATTGCGAAGTGCTCGAG 59 18141242 18141753 TTCTGGAAACTGGCTTGCT 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 3 2 2 90 2L 18836780 18836798 ATTCTCTGGATCCGTGCTG 59 18836645 18836729 CATTAATACGAGTCCTTTGCCT 58 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 3 5 6 80 2L 19511014 19511033 CTACAACGACCTGGAGATCC 59 19510891 19510972 CCGATGTCCATACATCTCGA 59 NA Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 1 2 2 84 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891877 19891898 ATTCTTGTCGTACTTCTTGCAG 59 NA Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 3 2 2 105 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054952 20054970 TCCGGAATTTCGTACTGCT 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 2 2 2 68 2L 20766015 20766033 GTGCAGACAACAAGTGGAC 59 20766142 20766160 CTGAGGTCCTTGTACAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 2 4 9 130 2L 20876958 20876976 ATCTGCCCACTAGTCAGTC 58 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463 1 1 2 80 2L 21080525 21080608 GGACTCATTCTGCTGATACCT 59 21080650 21080668 ACCCGCTAAATTTGATGCC 58 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 2 4 4 80 2L 21388772 21388791 CTTTGCCAGATCATATGCCA 58 21388832 21388923 CTACATTTGTTTCATTGGGCC 58 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 3 3 3 96 2L 22959942 22959963 TAATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 1 2 2 85 2R 1952499 1952517 TCCTACCCTGTGTTCACAG 58 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 2 1 1 84 2R 2090812 2090830 CCTCTGCAAGCAAGTAAGC 59 2091529 2091547 AGCTGTCTTGGAAGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301422 3 1 7 108 2R 2611128 2611352 ATTCGAGGACTCTGGTTCG 59 2611038 2611056 TATGGTCGATGCAGTGTGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111054 2 1 59 93 2R 3249289 3249307 TACAAGAGCTACCAGTGCC 59 3240862 3249234 AAATAGGCTCTGTGATGACCA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111060 1 1 59 80 2R 3226957 3226976 GAAAGTATAGTTGTCGGGCG 58 3219874 3226914 ATCTGGGAGGTACGTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 3 2 59 108 2R 3245210 3249231 TCATCACAGAACCCGTAGG 58 3245120 3245138 TGAGCTGGACAGATGAGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 3 2 59 103 2R 3238797 3249235 TTGGTCATCACAGAGCCTG 59 3238712 3238730 CAAGTTAGGGCCAATTCGC 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0100216,FBtr0088911,FBtr0088912 1 3 3 143 2R 3479247 3479265 AGGATCCTTGTGAGCTGTC 59 3479369 3479454 CAGCTAAATGTTGTTTCACCTC 58 NA Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842 3 1 2 80 2R 3720618 3720636 CCCGTGTTGGACATTAAGC 59 3720679 3720752 TCCAACAGAGGTTCTTCCTG 59 NA Nonspecific Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 2 2 4 122 2R 3873199 3873218 TTGACATTGATCTTTGGCCG 59 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 3 2 2 119 2R 4278940 4279015 CAGTATAAACAGGCTGAATGCC 59 4279095 4279113 GGACCAGGTGAATCATCCC 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 1 4 9 148 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 1 2 3 90 2R 4619312 4619680 GCTATTCAATATGCAGTCCGG 59 4619242 4619260 CTCACGGAGAACTTCCTCG 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 3 5 5 80 2R 5066384 5066405 AGGAAGATCTAGACTCCAAGGT 59 5066245 5066343 CCTGGTCGCATTTATTGGC 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088604,FBtr0112897,FBtr0088602 1 3 10 95 2R 5144980 5144998 CTGTATCGTGGTAGCAACG 58 5143203 5144922 CTGTGGTATAACCTCCACAC 57 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 3 4 5 177 2R 5424067 5424085 GAAGCTCATGGATACGCAG 58 5424433 5424527 CTTTAAGGCTTGTTGCAAATCC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0088450 1 1 2 81 2R 5778794 5778812 GAATGTGATGAAGGGCTGG 58 5777232 5778751 ATCCTTCGACGTGTAATAGGA 58 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 1 4 5 82 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949138 TTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 1 3 3 81 2R 5982411 5982429 CGATCTCATCTCCGGAGAC 59 5982473 5982562 TGAGGCACCACATAGATAGC 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 3 3 3 81 2R 6019888 6019908 CCAGAGCTACGAAATAAAGCT 58 6019949 6020269 GATCTTGATCACGCTCTTCAG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089354 3 1 26 132 2R 6377781 6377799 CAAATACGCGTGCAATGTG 58 6377303 6377687 CAAGACACATTTGCACTTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088043 1 1 2 100 2R 7876823 7876898 CCGCTTTCTGATATACTCAACG 59 7876959 7876977 GATCGTACTCCATCCAGCC 59 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 3 3 3 93 2R 8212163 8212183 TCATACTGTTGCTCCTATCGG 59 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942,FBtr0087943 3 2 2 114 2R 8402365 8402385 GTCACTACAGTTTGCTGAGTG 59 8401757 8402290 CAGACTTAAGCTGCGATGTC 59 NA InUTR Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087844 1 1 2 80 2R 8541555 8541626 ACCAGCAGATCTATGACTCC 58 8541669 8541687 TTCGAGATCCCATTTCCCT 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 3 6 6 155 2R 8548085 8548104 GAGAACAAGACCTACAGCTG 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 1 2 2 83 2R 8575267 8575285 GTAGCTTTACAGAGGGCAG 57 8575390 8575408 AGTAGCGAAATCCCAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 3 4 6 143 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151379 9151398 TGTTCTCAATGGTGTTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 2 3 12 104 2R 9310220 9323716 AGTACGAAGATGACGAGGAC 59 9310135 9310153 TACCGTACTTAGTGGGCTG 58 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 1 3 3 80 2R 9407577 9407595 GTCCATGCAACAAGGATGG 59 9407451 9407535 GGTAATAGGTCTCGTTCTCCT 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 3 10 15 151 2R 9752989 9753574 ACCAATTAGGCGAAACATCAG 59 9752858 9752876 CCTATAGCCGGAATGGCTC 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087583 1 1 3 101 2R 10039637 10039655 ATCAAAGTCAGTTCTCCGC 57 10039417 10039574 CGAAATGGTACTGGAACTCTC 58 NA Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 1 1 1 60 2R 10049067 10049085 ACCTACTGTCCGTGTATGG 58 10049164 10049182 CCAATGATCCCAGGAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 1 3 8 80 2R 10064187 10065378 GACAAGAACTGTGACATACTTCC 59 10065418 10065436 CGAGTCCTCGTTATCCTCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 3 4 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184215 TATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 2 3 3 80 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251531 10251549 TGAGGTTGTACTTGAGGCC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 1 3 4 99 2R 10756534 10757570 AATATTACATCAGCCAGGTGG 57 10756455 10756473 AACAATTGGACGTAGCTGC 58 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 3 4 4 111 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026098 11026116 GCTGGATTACATTGGCCTG 59 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087403,FBtr0087402 3 2 2 105 2R 11100179 11100198 ATAAATTCTGCGAGTGGCTG 58 11100042 11100114 GTCACATCCGAATAAATTCCCA 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 1 4 7 92 2R 11660745 11661328 CCAACAAGGTCGTAATGTAAGG 59 11660674 11660695 GGGTAAGAGTTCCTATACTGCT 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 3 4 4 81 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747610 11747703 CTGCTCTAGATCTAGGCCC 58 NA Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 2 2 2 80 2R 12008552 12008572 GGACCCGAATACTTTATGGAC 58 12008613 12008698 CGATAGGAATCCAAAGGGTC 57 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 1 2 5 114 2R 12220626 12220644 CTGGACACCTATGTGGAGC 59 12214657 12220548 GTAGTTCGGTGTTGTTGGC 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 3 2 3 169 2R 12752526 12752604 AGAATAAGCAGAACGGATCTG 58 12752377 12752396 ATACTGTGCATACTGAGTGG 57 NA Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 2 1 1 104 2R 12893928 12893946 CGACCAGTTGAATCTGCTC 58 12894295 12894313 TCATTAGTGCCTTCCACGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 2 7 9 113 2R 12959348 12959484 AATCTGAAGACCAAGAGATCC 57 12959255 12959273 CATCGAATGGGACATCAGG 58 NA Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 2 2 2 83 2R 13405924 13406004 CTACACCAAGTATAACAAGTTGTCC 59 13406043 13406063 TTGAAAGGTTCTGAAGCATCC 58 NA Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 3 3 3 80 2R 13461205 13461294 TGTCGGAAACATACGATTACC 58 13461335 13461354 AGTGATGCAACAGACAACTC 58 NA Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 3 2 2 80 2R 14616058 14616076 CTACGGTGTCTCCTTCACC 59 14615931 14616017 AAGCGATTAACTCCGTAAATCC 59 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0086574,FBtr0100137,FBtr0299568 3 3 3 223 2R 14946980 14947108 CAATCAAATAAACGCTGCCT 57 14947294 14947312 CTTGCAGTATCGCCTTGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 2 4 6 91 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 2 11 19 82 2R 15360675 15360953 GAAACTTTGCGTGTTGGAC 58 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 3 5 19 97 2R 15361384 15361402 ACAAGTGGCATCATTCCAC 58 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 3 1 1 61 2R 15586763 15586782 CTCTAAGCGAACTAGTAGCG 57 15586659 15586678 TTGAATTTGCTTGTAGGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318 2 1 3 113 2R 16144278 16144298 TATCAATGTCGAGCAAGTTGC 59 16144125 16144206 AAGAGTGATGATTTGTTGGACC 59 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273396 1 1 2 80 2R 16876690 16876710 TTACTCCATTCTCGATCTGGA 58 16876568 16876651 GAATATACTTTGTGAACACCGG 57 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 2 6 15 94 2R 16907281 16907299 TGAATGCCACGAAGAAGGA 59 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 1 8 15 86 2R 16911249 16911490 CAAGCGAACATTCCAAATTGG 59 16911538 16911556 AAATCTGGGACTCATGGGC 59 NA Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 3 2 2 81 2R 17009342 17009360 GTTGCCATGAACACGAGTC 59 17009404 17009520 CCTCTATGAGATCAGCCTCC 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 1 2 9 94 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399673 17399907 AAGTACTTGACGTAGCCCTC 59 NA Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 3 2 2 89 2R 17585955 17585973 AAGAAGGATAATCCCGGCA 58 17585801 17585902 CTCCCACTCGGTCTTATCC 59 NA Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 3 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242 2 1 4 138 2R 18294311 18294558 GGCTTAATCGTGTGCTGAC 59 18294660 18294678 TCGTAGTCGTAGTCCTTGC 58 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242 3 1 4 140 2R 18294312 18294559 GCTTAATCGTGTGCTGACC 59 18294663 18294681 TCCTCGTAGTCGTAGTCCT 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 1 8 8 101 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 3 2 3 133 2R 19656590 19666547 CTGATAATGGAGGGCAGCA 59 19656475 19656493 TCACTCAGTTGGCCTTCTG 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 1 2 2 81 2R 19701895 19701913 AAGGTGGTGATCTTTGCAC 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 1 2 2 84 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299756 20299774 CAGAACGATTGACCTCACC 58 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089868 3 1 2 133 2R 20464511 20464531 AGCGAATAACATGACGAAACC 59 20464625 20464712 CAATGTTCTGCCCTCTTGTG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 3 3 3 99 2R 20963061 20963135 AACAATCGCGCAATCTCTG 59 20962980 20962998 CAGTCGCTATCCAAGTCCT 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 1 5 6 81 3L 352342 352363 TATCTCGAGTTATCCGAAAGGG 59 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571 2 1 4 132 3L 344210 344228 CAATCCAACCAAACTTGGG 57 343642 344114 TAGGATGGTTCCTCTCCTG 57 NA Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567 3 1 2 120 3L 370612 370631 TCACTTCAAATCCTCAGGCT 59 369665 370215 CAGAACCACCGAATAGTTTGAG 59 NA Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 1 3 3 101 3L 1621165 1621183 TGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 3 5 5 100 3L 1635218 1635236 TGATGATCATCATGGGCGT 59 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864 1 1 2 128 3L 1872467 1872596 GAGTTCAAAGCACAGTCGC 59 1872357 1872375 GATGAGCTGCCATGTTTGG 59 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 3 2 4 109 3L 1881209 1881229 GCTATTTGCTCATCTTCACGG 59 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857 3 1 4 99 3L 2119120 2125248 TCTCAATACGATCAAGGCAC 57 2119040 2119058 TATTGACGCCATTACCCAG 57 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 3 4 4 281 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253423 2253441 TGGCGATCCTGTAGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 3 6 15 80 3L 3083796 3085208 TCGCCACTTATATGGTCAC 57 3085252 3085270 ATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 2 3 3 110 3L 3168165 3168184 CACATGATCTGTCCATCGTG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 3 5 5 67 3L 3300763 3300781 GTAGTACCACCGATCTGGA 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 1 6 13 117 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593415 3593433 TCATCTCCTCGCGAATGTC 59 NA Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 3 1 1 86 3L 4471709 4471730 CGCCGGTCTAAGATATTATTCG 59 4471883 4471903 TTGTAGTTGTAGCCAGATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 2 3 10 81 3L 5535644 5535663 AATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112711 3 1 8 98 3L 5735134 5735218 AAGAGACCCTCCTATGCTC 57 5735280 5735298 GTGACAGTCTACACAACCG 58 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 2 3 3 82 3L 6088576 6088755 GTGTCCTTTAGTGTGGTGC 58 6088801 6088819 TAGGGCTTCACCACTTCAC 59 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 3 3 3 83 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088584 AAAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077055 1 1 3 143 3L 6105289 6105479 CTCTTCGCAGATTCCTCGT 59 6109057 6109077 GGGTCCGAACATTTGATATGG 59 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 1 3 3 80 3L 6609689 6609783 CAGATCTGATAATCTACTGCATTCG 59 6609821 6609839 ACAGCGCTTTGAAGATGTC 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 3 2 2 87 3L 7117435 7117511 GTTATGTCCACTGTCTGCA 57 7117366 7117385 TATACAGCAAGTGGTCATCC 57 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076885 2 1 2 90 3L 7316340 7316358 AAACACCTCTCAGCTTCAG 57 7316203 7316287 ATGGAGCAAACTTTCCTACG 58 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850 3 2 3 160 3L 7375680 7375698 CGAGAACGAAGATGACTCC 57 7375819 7375893 GTTTAGCTACTTTCTTTGCAGC 58 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 2 2 2 81 3L 7750856 7750940 GCTGTAATGATATCGACGAGTG 59 7750979 7751000 CATATGAATTCACCAGGAAGGT 58 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076774 1 2 5 120 3L 7891946 7893189 CATGGCAATGGTGGTTGAC 59 7891844 7891864 CTCATTGGCATAGCCATTCTG 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 2 4 5 85 3L 8092629 8096005 TCATTAAGGAAGCCCTCTCAC 59 8096051 8096070 TTGCACCGTAATACTGGAGG 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0300426 3 1 5 168 3L 8581769 8581788 CATCAAGAAGGAAGCTTCCC 58 8581916 8582048 GTCAAATAGGTTAGAGCCTCTC 58 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 3 5 7 113 3L 8902025 8902096 GGAGTGGTTAGTTTGCCAG 58 8901930 8901948 ATTGGGTATGAGAGCTGCA 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137 2 2 5 81 3L 8929865 8930047 GATGAACTTTAGGAAAGTATCCGG 59 8929807 8929830 CGACAATGTGGATATGATACTTGG 59 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 2 3 4 111 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942279 8942297 CAGTTCCTGACGATGTAGG 57 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 2 5 5 126 3L 9101076 9101096 TATACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 2 3 6 85 3L 9338852 9338937 GAATCGAGGGAAGTCTGCT 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 3 3 3 98 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503664 9503682 TCAATCTTCAGACCCAGCA 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 3 4 12 115 3L 9774994 9775719 CTACCTGGGTAATTTGTCTGG 58 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 2 1 1 100 3L 10145141 10145160 TATTAAGTCGTGTCATGGCA 57 10145272 10145290 AATAGGCCATGTTCACCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0076235 3 1 2 82 3L 11087696 11087717 CCAATCAGATGCTTAAGAATCC 57 11087443 11087653 CACATCCATGGTGATCCTC 57 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139 1 1 2 80 3L 11614363 11614382 ACTGACACCTGAGGAAATCG 59 11613754 11614322 TGACCGTATTGGTTGAGTAGG 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 2 3 3 92 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681314 11681333 CAGTGACCGACTCAAATAGC 58 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300097 3 2 3 88 3L 11684201 11684219 GCTTTACAGTTGTCCGCTG 59 11684073 11684149 TGCCTACCGATCAATTCCC 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 3 5 5 117 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694509 11694589 GCTGTCATTTACATGCGAG 57 NA Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 3 2 2 93 3L 11715618 11715692 ATTGATGTAATCCGGACGC 58 11715749 11715767 TATACAGCTTTGGTGTGGC 57 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 2 5 5 193 3L 12021961 12048294 GATCTCCAGTCCATCCGAC 59 12020252 12021806 CCATCAACATCTTTCAGCGAG 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 3 4 4 87 3L 12558125 12564646 CAGAGAAGCAATTAATCGAGGAG 59 12558060 12558078 TTCGCCATCGAGACTATCC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 1 2 6 80 3L 14219486 14223279 GATAATCTCAATGAGCAACTGG 57 14223318 14223338 CCGATCCTCAGCTATATTCTG 57 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565 2 1 2 117 3L 15577185 15577395 GACTGCTAAAGGACGATACG 58 15577475 15577493 TTGCCACAAACACCAAGTC 59 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 1 4 4 80 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593966 15594346 CAAAGAATGTTGCAATGCGT 58 NA Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 1 2 2 97 3L 16135210 16135228 ATGCTATCGGTACAGACGG 59 16135007 16135151 AATTGATCCCTATCATCGGGT 58 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 2 4 4 96 3L 16784162 16784181 GCAGACGATAATGTAACCGT 58 16784030 16784104 CCTCTCCATATTTGCATGCA 58 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 1 4 4 80 3L 17008138 17008158 GATACCTTCAAGACCAAGTGC 59 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 2 2 2 84 3L 17045162 17045180 GTTCATACTCACCGTGTCG 58 17045228 17045832 AAAGCTAATGTCAGCCTGG 57 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 3 3 3 87 3L 17873842 17873860 CTTCGATCGTCACTTGGGA 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151 1 1 4 180 3L 17952716 17954118 CTATCACAATGCGCCTGTG 59 17952554 17952572 GAACTCACAGGTCTCGAGG 59 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 3 2 2 86 3L 18745982 18746125 CAGTGAATGACAAATTCAGAGG 57 18745917 18745935 TGGTGTACAGGTGATCCTC 58 NA Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 2 2 2 81 3L 19272150 19272170 GTGCTGGTAATGTTTATCGAG 57 19272211 19272501 TTCGCTGGTAATTATCCTCTG 57 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 3 2 3 84 3L 19488012 19489662 CTGCTGCATGTGGTATTCC 59 19487946 19487970 GATAGTAGGTCTCATTTACATAGGG 58 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 3 5 5 80 3L 19795361 19795442 GGCATGTATTTGTGGTACGAG 59 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 3 3 3 97 3L 19992458 19992476 AACATAGCTCCGAAAGGAC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 3 3 5 94 3L 20505403 20505421 GAGGAGTCGTACGACTTCC 59 20505478 20505632 GATCACTGGTAGCTTTCCCT 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 1 4 4 80 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508475 20508553 AACCATAGCCCGAATCCAG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078307,FBtr0078306 3 2 3 89 3L 21224137 21224155 ATTTGTGCCCTGCAAAGTC 59 21224208 21224282 CGACGAAAGAATCCCTTGC 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 1 3 3 61 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265938 21265956 AGTACCGATCGTTTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 1 4 4 80 3L 21488570 21488707 AGACATTGATGTTCGCTACC 58 21488509 21488530 GAATATCTGGCGAATAGCTACC 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0111017,FBtr0301364 2 2 5 155 3L 21914419 21915691 TAATATGAGTGTTGAGCTGCAG 58 21915807 21915825 GTGATAGCTCCGTTTGTGG 58 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 3 2 3 171 3L 22262796 22262815 ATACTTCGTGGTCACTTCAC 57 22263010 22264666 AACGTCCTCATTCAGATGTG 58 NA Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 3 1 1 126 3L 22641777 22641795 TCGGCCTATATGGATCTCG 58 22641943 22641961 CTTTCTGTTGAACCGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536 1 1 2 111 3L 22727829 22728019 TTCATGGAAACGTTCTGCG 59 22727736 22727756 TTATTCTCGGGTAGAGTCTCC 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113337 3 1 21 187 3R 117786 120851 ATTTCATTGGCGCTGTAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0078899,FBtr0301771,FBtr0300790,FBtr0301772,FBtr0300789,FBtr0113343,FBtr0113338,FBtr0078900,FBtr0078898,FBtr0301768,FBtr0301769,FBtr0113341,FBtr0078901,FBtr0113340,FBtr0078897 3 17 21 185 3R 108544 109953 GAACTAAGGCCAGCTTACC 57 110100 110120 GCACTTAATTGGTTTCCAACC 58 NA InUTR Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 6 10 106 3R 570265 570283 TAAGCCAGAAGACGACCTC 58 569896 570198 TCAGTTGAGTATCCATATCGGT 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 6 10 83 3R 570241 570259 AAAGTTTGGAGGTCTTCCC 57 569895 570197 TTCAGTTGAGTATCCATATCGG 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078812 3 1 19 118 3R 1117791 1118369 CCTGGGAGCTTATAAAGGC 57 1100789 1100807 ATCTGTGCTCATTGACAGC 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 135 3R 1119084 1119798 GAAAGTATTCTCAAGACGTTCCTC 59 1118972 1118990 GTCCATGGAGACCATGGAG 59 NA Drosophila melanogaster 61 CG31542 FBgn0051542 FBtr0302421 1 1 2 227 3R 1196127 1196145 CCAATGTGACCGCTAATGG 59 1196398 1196416 TAAACTACGGCTTATCGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765 1 1 2 80 3R 1324583 1324673 GTTCCACCAGGAGAGTCTG 59 1324521 1324539 AGTTCGCCGATAGAAGGAC 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 1 1 1 68 3R 2045356 2045374 ATCAAACGTGAGGACTCGT 59 2044285 2044304 CACGTAGTTGTAGATCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 1 2 2 117 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161727 2161748 GATATAGTTCTCAATGGCGTCC 58 NA Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 2 2 2 80 3R 2482608 2482881 GTTTCGGATAAGGGCTATGG 58 2482547 2482565 CTTGCCCATCTTGAGATCG 58 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276,FBtr0089277 3 2 4 137 3R 2552944 2565281 AACAATCAGGGTGATAACTCC 57 2537545 2537563 TATCTCGATCCTCCTTGGG 57 NA Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 1 2 2 80 3R 2897684 2897703 CCATACTGCAGCATATTCGC 59 2897569 2897641 CTTGCAGGACCAAATCGTG 59 NA Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 1 2 2 84 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365154 3365172 CACTGGAGCTCTTTACACG 58 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 1 3 5 179 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 3 2 2 87 3R 3745514 3745592 TGTCAGGTGAATATGCCGA 58 3745445 3745463 ACCAGCTGATCGATCTGTG 59 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 2 3 3 111 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 1 2 2 80 3R 5998356 5998375 CTCTTCCTGATCATGTTGCT 57 5998142 5998315 CTCGATGATCTCTGTATTGGC 58 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 2 5 5 80 3R 6041340 6042793 GGGTGGATGAGATATCCGAG 59 6042836 6042854 ACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 2 2 8 94 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359649 6359668 GACTGAGGAATACAATCGCC 58 NA Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 1 2 2 93 3R 7059704 7059724 CTTTATTTCGTCGGTGAACAC 58 7059280 7059649 ATCGAATTCGATTCTGGCC 58 NA Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082534 1 1 2 187 3R 7582207 7589216 GAGTCAGTCAGACGGACAG 59 7582038 7582058 GAAAGGTTGAGGAATGAAGGG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 1 3 3 80 3R 8795400 8795423 TGACGAGGATATAAAGACCTACTC 59 8795253 8795362 CTGCTGCCATACTTCTTCTC 58 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 2 3 3 178 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795022 8795040 GATCGAACTCGTACTCGCA 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 2 5 5 82 3R 8845522 8845623 GAAATACACGAGAAGGTCCTC 58 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 2 3 3 91 3R 9157365 9157630 TGTTATGCTCAGGAATGCC 57 9157292 9157310 AACGCTCTCCAATATGCAG 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 3 2 5 81 3R 9892802 9892820 TTACGAGTGGATGGTCCAG 58 9892864 9905076 TATGGAGTTCTTCCATCCGG 59 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 3 5 5 80 3R 10090933 10090954 ATAACCTTGTAGTTGATGCCAC 58 10090814 10090892 TCGAATAGCAATTCGGCTC 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 2 5 5 80 3R 10090933 10090955 GATAACCTTGTAGTTGATGCCAC 59 10090815 10090894 CGAATAGCAATTCGGCTCAC 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 1 4 4 80 3R 11217401 11217419 CGATGAGTCCAAATCCCGA 59 11217458 11218031 CCTTATCACCAAATACCTTGATCG 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 103 3R 11622603 11623027 TCGCTACCAATCACTCGAC 59 11623094 11623112 ATCTCCAAATCGGTCAGCT 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 1 1 1 62 3R 11659783 11659801 ATGATTCGGATGACGATGG 57 11659638 11659656 CGTATATTGCGGGCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216 2 1 3 109 3R 11825681 11825699 CATTTCGGCTGCTAATGCA 59 11825770 11826343 CGAATAATGTTGCTGACAACG 58 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 3 2 2 170 3R 11865107 11865125 AGTTGCACGGTGTTAACAG 58 11865258 11865345 GTTTGAGATCATGCTCCTCC 58 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113477 1 1 2 115 3R 11995735 11995821 TCGCTACTGAACAAGATCGA 59 11995899 11995917 TCTGTCTTCTGACGCACAG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 2 2 2 92 3R 12256831 12256849 CGATGGGAAGGATCTTTGG 58 12256905 12257013 TGTACAGAGACACAGTGGG 58 NA Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 1 1 1 60 3R 12307836 12307854 AGGCACAGCTCTTTATGAC 57 12307738 12307758 CCTAGTTGTTGGGTGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 3 3 5 135 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391566 12391584 CCCTGATCTCCCTTGTGTC 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333,FBtr0083332,FBtr0112803,FBtr0300036,FBtr0083334 2 5 6 114 3R 12462195 12462215 GTACACCATGAAGGATCTGGT 59 12462291 12462718 GATCACATAGCGTCCAGCT 59 NA Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 2 2 2 80 3R 13555396 13555892 ACACCGTGGACATTATACGA 59 13555932 13555953 GAATATTATGAGGTGGCAGGTG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 1 4 7 80 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834636 13834654 TTCGTGTTACTCTTGGCGA 59 NA Nonspecific Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083606 3 1 2 81 3R 14065821 14065899 TGGGAGTTCCCTACAAAGTC 59 14065759 14065778 ATCTCCAACGACTCACTAGG 58 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 2 5 5 113 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132726 14133185 GATACAGGATGGGACTGGC 59 NA Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 3 1 1 212 3R 14179564 14179582 GACGGAGAGGGTCAAAGAC 59 14179313 14179331 ATATAGTGATGCGGACGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 1 3 3 114 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0083684 1 1 2 111 3R 14568805 14568825 ATCATAGTACCGTTACAGCTG 57 14564312 14568734 TACTCAACTCTTGCAACATCC 58 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0301700 1 1 3 85 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873440 15873529 CAAATCCACCTCCCAACAG 58 NA Nonspecific Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 1 2 2 80 3R 15869772 15869849 TATACACGGAGCGATTTCCC 59 15869891 15869910 TCACCATCAAGGGTATCGAG 59 NA Nonspecific Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256 2 1 8 104 3R 16582964 16617479 TAAGTTTGAAATGGCGGAAGG 59 16617545 16617563 AGCAGCTTGGGATAATCCT 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084070 1 1 22 80 3R 17200833 17200853 AACAGTCCCAGAACTACAGTG 59 17184783 17200791 TGAACTGACCTTGAGCCTC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0114359 1 1 22 80 3R 17200833 17200853 AACAGTCCCAGAACTACAGTG 59 17196941 17200791 AGGTGAGAACTTGAGCCTC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084062 3 1 22 81 3R 17190490 17190508 GGTAAAGACAAGCTGGTGC 59 17190359 17190447 ACACATGGGTTATGATGTCCT 59 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084168 2 1 2 96 3R 17597551 17597631 CACCACAGAAGTTACCGAG 57 17597473 17597491 CATCACTGTAGACTGCACC 58 NA Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 1 2 2 109 3R 17854856 17854942 GATGTCTGGTTCAATGCTCC 59 17855014 17855032 TAGATGCCCTGGTTGATGC 59 NA Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 1 2 2 216 3R 17861730 17861811 GGATGAGGATGACGACTTAGAG 59 17861988 17862006 ATCATCTTCACTCCCGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 2 2 2 89 3R 17911579 17911966 GTTGCTACGACTGTAATCCAC 59 17911510 17911528 CGTTGTATCCACCTCCTCC 59 NA Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 3 2 2 175 3R 18205911 18205985 CCGATTCTGAATGGAAGACAG 58 18206122 18206140 TGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 3 2 2 81 3R 18274273 18274292 ATAGTGCTGGCTATCTGCAG 59 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 3 2 3 113 3R 18372512 18372531 TGGACATTCTGGAGTACGAC 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 3 3 3 97 3R 18370540 18370561 ATTCCAGCTATTCACTACAGCA 59 18370401 18370482 AGAATGTAGAGGAGGCCCA 59 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0084368,FBtr0084369 3 2 3 81 3R 18949045 18949063 TCCAGTGACGGAAAGAAGG 59 18949107 18949181 GTTGTGTCAATCGGAGTAGC 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 2 2 6 113 3R 19095557 19095575 CTTGGCAGACTGACTAGTG 57 19095315 19095480 TGTGATTGGATTGCAGTCG 58 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 2 3 4 140 3R 19432760 19433254 CTGCTAGACTTCCACAATGG 58 19432639 19432658 TATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 3 1 1 61 3R 19585716 19585734 CCATCTCTGTCGTCATCCA 58 19585612 19585630 CCGCATGTAGTCAACTACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0084509 2 1 4 118 3R 19817859 19817877 CTGGAGCCCTACATGAGTC 59 19817588 19817779 TCGCTAATGATTGAGTTGGAC 58 NA Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 2 2 2 143 3R 19864977 19865328 GAACGAAGGTCACAAAGAGC 59 19865433 19865452 TTTGTCTGCATCTTGTCGTG 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084581 1 1 3 83 3R 19977707 19977823 ATGATATGCGCATTCGTGTG 59 19977643 19977661 CATTCCGATGCGTGTTAGG 59 NA InUTR Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 2 4 7 114 3R 19985036 19985205 TACCCATTACCCGTATAACGG 59 19984884 19984902 TTTCGATACAGCTTGAGCG 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 1 4 7 191 3R 19985468 19985486 CACAGGCGTCATAAATCGC 59 19985038 19985210 GTTATACGGGTAATGGGTAATGTG 59 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 2 2 2 152 3R 20446822 20448648 TAAGTTCCACGGAGCTCAC 59 20448764 20448782 GTCAAAGGTGTCTCCTCGA 59 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 2 1 1 101 3R 20628357 20628375 GGCTTGATGTTTACCAGGA 57 20628216 20628234 TTTGCAACTCGATGGAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 3 2 2 143 3R 20691552 20691737 GTTACCAAAGTGCAGGTGC 59 20691844 20691862 CAGGATAGGCACCAGTTCC 59 NA Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 1 2 2 168 3R 20767855 20767939 TGCCATACGAAACAAACCC 58 20767705 20767725 GATAAACGACTTGTACTCGCC 59 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 3 3 3 98 3R 20924346 20924364 CGCTGTGATACTCCATTCG 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 1 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 1 2 2 133 3R 21085146 21085227 CTCTCACAGACCTACCAATCC 59 21085322 21085340 TAGCACACGATGTACCAGC 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 2 5 6 88 3R 21182007 21182025 CTTCATGTCTGTGCACACC 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 1 2 2 89 3R 21305993 21306115 CAGAGAATATTACTGCATGATCCAG 59 21305928 21305946 GTGATTGGGTTGACGAAGC 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 1 5 5 60 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 3 3 3 85 3R 21511212 21511298 AACTATTTGGATCACCCAGCT 59 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 1 1 1 85 3R 21885412 21885430 AAAGGGCGAAACAATACCG 58 21885533 21885551 TACTACCATACTCCACGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 2 3 3 83 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 3 1 1 80 3R 22460623 22460644 ACATTGGTTATATCATGCTGGG 58 22460740 22460758 GCTGATACTGGTAGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 1 2 3 106 3R 22788797 22788892 CAGCTTCACTGAGTTCGTC 58 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 1 2 2 80 3R 23069023 23069043 GTCACCAGTTTGGAAGAATCC 59 23068901 23068984 CCGTACTCGGTCTTATAGAACC 59 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 3 1 1 79 3R 23314693 23314711 TACTGGCTCTACCTCAGCA 59 23314821 23314839 AGTTTGATGCACTCAACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085249 3 1 3 135 3R 23755063 23755713 CATCCAATGAGCCCAAGAC 58 23755811 23755830 GCAACATATGGGAAGAGCAC 59 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 1 2 3 131 3R 24027914 24027932 ATCTGAGTGCCGAAATCGA 59 24052504 24060800 CCTCCGCTTTCTTAAAGCC 58 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 3 2 4 84 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940207 24940227 CGTGGACTTTCAATTATGAGG 57 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 1 3 3 86 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975351 24975369 TTGAAGTTCTCGTCCAGCT 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 1 3 4 113 3R 25142077 25142449 GTGAATCGGACTCATTCGT 57 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475,FBtr0085474 1 2 2 93 3R 25566675 25566754 CATAACTGTGCTGTGCGTG 59 25566811 25566888 ATACGGTGACCACGATCAG 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 2 3 3 236 3R 25959301 25959319 CCAGAAGATCAAGGACTGG 57 25959022 25959040 AGGAAGCCATCTATGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 3 5 5 83 3R 26289003 26289023 CATCTGCTCTATGACATCTCC 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 3 10 12 116 3R 26398690 26398708 ACCTGGTGGAGAAGAACTC 58 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 2 4 13 197 3R 26421341 26426933 CAGCGGAACAAATTAGGCA 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 1 1 1 95 3R 27130714 27130734 GCGATCTTCAACAGAATCTGG 59 27129987 27130005 ATTGCGACAGGTTGATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 3 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 1 2 3 80 3R 27663682 27663705 ATCTGTATCAATCAGTAGTGGGTC 59 27663743 27665614 CCAATTGATAGGGCTGTTGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 2 3 3 80 4 499215 499233 AACAAACTCCCAAGTAGCC 57 498699 499174 AGCTTCGTATACTGTACATCCT 58 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 1 3 6 90 4 636726 636745 ATGAGATCGAAGCATCAGGA 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 3 2 5 145 4 886675 886693 CCTTGTTCGATCGGAACTG 58 886490 886566 AGGACGAGAGTTATTGCCA 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0100296 1 1 5 161 4 1043002 1043020 GAAGGGAATACACCAACGA 57 1036238 1042878 TTCTCCACTCGTTAGAACAC 57 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0114112 2 1 4 83 U 1352558 1352576 TCGTGGTACGACGTATTGG 59 1352623 1352741 TAATCCGCCCAATCTACCG 59 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 1 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 2 3 3 191 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654858 654876 CATCACTGGCATTCACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 1 2 2 163 X 787631 787649 GGAACTCGACTACCACGAC 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 3 3 3 84 X 1674790 1674809 CTGAAATAGTCTCCAGGCGT 59 1674856 1675766 GACTGATATGCTGTGGCCT 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 1 4 5 87 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 2 3 3 87 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862014 1870614 CCTGGCATGTCACATTCAC 59 NA InUTR Drosophila melanogaster 61 csw FBgn0000382 FBtr0070379 1 1 3 94 X 1997800 2002424 TGGTTACACATGGTTTCATGG 58 2002480 2002498 ATTCACGGACGAGAAACGA 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528 3 1 3 104 X 2340217 2340451 CCGATAAGAGTCCAATGTTCC 58 2340133 2340151 CTAGATCTCTGGCCATGCA 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070502 2 1 2 121 X 2590287 2590367 ATATCCTAGACAAGGCGCT 58 2590184 2590202 CTCCAGTTTCACCGATGAC 58 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 3 4 4 180 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816602 2816620 TGGTTGAATCCAGGTCCAC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 1 7 12 80 X 3215179 3215197 ATATCGCTCCGATTCGGAC 59 3215239 3219968 TCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 3 4 4 95 X 5215913 5215931 CTAGAGCGCTCGTATCAGG 59 5215755 5215857 CAGATCATTCAGTTTGAATGCG 58 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 3 4 6 124 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470919 6470937 GTGTAACTGGTGCTGAGGA 59 NA Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035 2 1 2 117 X 6886907 6887222 CTTCACAGTGGTACGTGAC 58 6886808 6886826 CCACTGGTAGTATGCATGC 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300838,FBtr0300841,FBtr0100209,FBtr0100212,FBtr0300842,FBtr0100203,FBtr0100211 3 7 21 82 X 6980001 6981654 CCGGAATGTCACGTTATGC 59 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Nonspecific Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Tom40 FBgn0016041 FBtr0071074,FBtr0071073 1 2 2 81 X 7632154 7632418 AAATTCGCTTCGCAGATCC 59 7632462 7632481 AGAGGGTGTAATCACTACCG 58 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 3 2 3 167 X 7764352 7764370 GTTACGGAACAAGCTACGG 58 7764005 7764221 GCTTCGGGTTTATTGTCCT 57 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 2 3 3 80 X 7852239 7852317 TACGCCAACTAGAGGAGGT 59 7852177 7852199 AGGCTAGAGTCTTGTACTTATCG 59 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 3 2 2 81 X 8318277 8318297 ACGAAGAAGTTGAGAAGAACG 58 8318337 8318418 CTTAAGCGATCACTAGAATTGC 57 NA Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 2 3 3 81 X 8333722 8333742 AAAGAAATGCTTTCCCGAGAG 59 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 2 3 3 87 X 8488873 8488955 TACCTTCATCGAATGGTTCTG 57 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 3 3 3 88 X 9955306 9955324 GCAATGTGAGCATACCGTG 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783 3 1 2 211 X 10040520 10040538 CTTGGATCCGCTAAGGGAG 59 10040713 10040916 CTTCCTCGCCATTTGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 1 4 4 135 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 3 5 5 157 X 11027710 11028925 CCATGGTATACAAATACACAGCC 59 11027575 11027593 GTAGATGCCGTTCTTGCAG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 1 4 4 119 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698381 11698399 TCTCCAATGAGACGCTCAC 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 1 2 10 87 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848307 11856054 GAGTTCGAATCATCGTGCC 59 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 3 2 2 112 X 12416749 12417558 CAATTCAGACTCCTCGGCT 59 12416655 12416673 GTTGTGAAGCACTCTGGAC 58 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073747 2 1 3 120 X 12976564 12976652 TTAGTAGCATCGGTCAATCG 57 12976463 12976481 TCCGTGATCAATGTTTGGT 57 NA Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 2 1 1 114 X 13055031 13055049 TTATGACTTCAAGACGCCG 58 13055182 13055201 CGGAGTGTTTATCAGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 3 2 10 91 X 13490773 13494112 AAGAGTACACAGGAGAGGG 57 13490700 13490720 GGTGATGTATTCTTTCAGCTG 57 NA Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 1 2 2 80 X 13779523 13795523 CCCATAAGGTGGTCCTCTC 58 13779461 13779481 TCACAATTAGATGTCCTTCGG 57 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0300434 2 1 8 84 X 14824161 14824181 TTTAAGGTGGCCCTGATAGTG 59 14824483 14824797 CTTCTACTGTAAGCGTTCTTAAGTG 59 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983 3 1 2 96 X 14993063 14993857 TGGATAAGTTTACGCTGCAC 58 14993915 14993934 GTATTCTTGCTCACTCCAGC 58 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 1 3 3 83 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 2 4 4 81 X 15230530 15230550 CTGATCATCGACTACGATGTG 58 15230592 15230664 TGGAGAAGTAAACCACCCTG 59 NA Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0289961 2 1 2 186 X 15569825 15570403 ACTTAAGTGCCTCACCCAC 59 15570552 15570571 CTTCCTCTTGAGTTTGCCAC 59 NA InUTR Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074159 1 1 3 100 X 15832863 15832881 GAGCACTCCACTCATTTGG 58 15831778 15832802 CCCATGGAACTAAATTCATTGC 58 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 1 4 4 80 X 15896969 15896988 CCAAATACGGTGTTTCCCTG 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 2 3 3 83 X 16258619 16258638 TGGAGTATGCACGCTATGAG 59 16259258 16259276 ATTTCTTGCGCTCGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 1 2 2 105 X 16312123 16312141 GATCCGTGTGATCATCACG 58 16311920 16311998 AGTATCGCCCTTGATCCAG 59 NA Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 3 1 1 62 X 16506697 16506715 TGCAAGCAATGCTTGAAGG 59 16507573 16507591 GATGTCGCGATGAATGACG 59 NA DesignNoJunction Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 2 4 4 80 X 16649790 16649879 TGAAAGTCAGCACTGTGGA 59 16649728 16649750 CATTGGTGTTCGAGATAAAGACC 59 NA Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474 2 1 2 102 X 16700492 16700513 ATTAAAGTACATCGCCGAAGAG 58 16700573 16700649 ATATGAATTTGTCCGCGATCTC 59 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998 2 1 3 167 X 17461453 17461471 GCTATAAGCGTGAGGTCCT 59 17461244 17461322 TTTCGTAAAGCTCTTGGCG 58 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 3 2 2 80 X 17497494 17497737 GAACAAAGAGGGTCTCTTGG 58 17497780 17497798 AGTTGAGTGGATCCAAGGT 58 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 1 3 4 175 X 17767426 17771464 TAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300976 2 1 6 67 X 17796067 17796085 AATACGATAGCATCGGGCT 58 17796113 17796651 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 1 2 2 80 X 17992540 17992628 ACCAAGCTGTGAATGATATACC 58 17992481 17992502 GTTCCAGCTGAAAGTCATAGTC 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 2 2 7 80 X 18004586 18004605 CAACGCGTATACAGTTTGGA 58 18000953 18004544 GAGATCGTTGATCTCTTGGG 57 NA Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 2 3 3 80 X 18027216 18027296 CATGTCATGGATTGAGGTGC 59 18027155 18027176 TACGTGTACATGAGAGTCTGAC 59 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 1 3 3 107 X 18461161 18461553 GACTACTTGAGATTGTTTGGC 57 18461620 18461640 CTCCAAGTGATAGACATTGGT 57 NA Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 1 1 1 80 X 19072087 19072105 GATGACGATGCAGTTCGTC 59 19071948 19071966 CAGCTCGGTAAGATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694 2 1 2 104 X 19093490 19093871 AACTATGGCCAGATCAACAC 58 19093405 19093423 CAGTTCATGGAAGCTAGCC 58 NA Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0074800 1 1 3 199 X 19766287 19766305 CTGTGATGTTGGCTCTCCA 59 19766466 19794657 GATAGTAACCACTGGGATCGT 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089405 1 1 13 216 X 20106418 20106436 CAACTCGATGACTTCGGAC 58 20101678 20105853 ATCAAATGCAAGCACATCG 57 NA DesignRelaxed Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407,FBtr0089401,FBtr0089404 2 4 13 131 X 20101657 20103198 ATTCACAGACGACGAAGAG 57 20101544 20101562 ATCTCGAGTGGTGTGATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 1 2 3 192 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077431 21077449 TTTGAGTTGGGTAGGCTGG 59 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 3 2 8 85 X 21251051 21251069 ATGAAGTCCAGCTTCTACG 57 21251117 21251692 CCAAAGGATCTTAGCCTCTC 57 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349 1 1 5 88 X 21867282 21867300 CAACACATACACCAGCCAC 59 21867352 21868012 TCTCGCCAACGTACTATCG 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299526 1 1 5 80 X 21900446 21902844 AAAGAACCGGTTTCTTCTCCT 59 21902886 21902904 TCGAGCATGACAAGTCTCC 59 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684 2 1 3 163 XHet 23167 25000 TTGGTTATGTGATGAACACGC 59 25123 25143 ATTCTGCCGGATATTTGATGG 58 NA Drosophila melanogaster 61 snmRNA:430:CR33743 FBgn0053743 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32287 FBgn0052287 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A771 FBgn0086067 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:84Fb FBgn0011960 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31576 FBgn0051576 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31518 FBgn0051518 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135d FBgn0083009 FBtr0113572 3 1 1 79 X 17040202 17040221 AAATTCCATCCCAGCTAAGG 57 17040142 17040163 GCTTAATCTTCAAGCACTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-CD10 FBgn0065071 FBtr0091642 1 1 1 60 X 6425711 6425730 CTAGCAGGTTATCCTGCTCC 59 6425670 6425693 GTCAGGAGTCAAATTTCTACATGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32496 FBgn0052496 FBtr0074499 1 1 1 87 X 17793236 17793254 AGGACAACGATGCCTATCG 59 17793305 17793401 CCATTGAGCATGCTCTTGG 59 NA Nonspecific Drosophila melanogaster 61 CR32730 FBgn0047092 FBtr0071016 2 1 1 101 X 7041952 7041970 TTTGACCAGCTGACAAGCT 59 7040788 7041887 GCAGTTCAAGCAGTCTTGG 59 NA Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903 2 1 2 216 X 22414889 22414907 TAATTTCAAGGCGGTGCTG 58 22414630 22414648 ATAGTAGATGGGTCCCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077358 1 1 2 83 X 21930348 21930369 CAATCTTATTTCGCACCAAGAG 58 21930413 21930591 TTAGTGCCATTCACCTGGT 59 NA Drosophila melanogaster 61 CG1718 FBgn0031170 FBtr0077233 2 1 1 80 X 21164551 21164634 AAATTCTATTCTGCAGGAGGAG 58 21164492 21164511 AAGATGCGAGACCATTTCAC 58 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274 2 1 3 85 X 20804400 20804419 AGAATGGTCAGGATGCTGAG 59 20804277 20804352 CAGAATGCCCAACTTCTGC 59 NA Drosophila melanogaster 61 Sdic3 FBgn0052823 FBtr0089465 1 1 1 80 X 20087989 20088076 GTATTCTACTTTGAGCGGCG 59 20087928 20087947 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 CG9581 FBgn0031093 FBtr0070026 3 1 1 100 X 20063441 20063516 TTGTCACATGCTCGTTCTG 58 20063359 20063380 AGCCAGTTAGGTAGTAGAAGTC 58 NA Drosophila melanogaster 61 CG34331 FBgn0085360 FBtr0301576 3 1 1 61 X 20016604 20016623 ACGAATGTTCCCGATATTCC 57 20016647 20016665 TCCTCTCCGAAATCGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15323 FBgn0040784 FBtr0301572 1 1 1 60 X 20004298 20004317 ATTGCCCTGAATGAGAAGGA 59 20004257 20004275 TGATTACATCCAGGAGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14223 FBgn0031053 FBtr0074758 2 1 1 114 X 19554622 19554705 TCTGCCTTATTTCCCTGCT 58 19554526 19554544 ACAATAAAGTCCTCGCCAC 57 NA Drosophila melanogaster 61 CG14190 FBgn0030979 FBtr0074663 3 1 1 60 X 18959624 18959644 ATGTTCGAAGCAGAAATGTCC 59 18959664 18959684 CTTCATCCATTCCGGTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6873 FBgn0030951 FBtr0074607 2 1 1 60 X 18633530 18633550 GACTATGAGTATCAGCACCAG 57 18633490 18633508 TTAGCTTCTCCTTCAGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CCKLR-17D1 FBgn0259231 FBtr0299681 1 1 1 88 X 18603479 18607397 CTACTATGATTACGGCCACTG 58 18603411 18603429 GCATGCAGTATAGATGCCT 57 NA Drosophila melanogaster 61 Tsf1 FBgn0022355 FBtr0074559 3 1 1 80 X 18284139 18284222 TGTATTTCAACGACAAAGCCG 59 18284261 18284282 GGAGATCTGTGTAGATCTGCTC 59 NA Drosophila melanogaster 61 CG8915 FBgn0030833 FBtr0074447 2 1 1 91 X 17138021 17138039 AGCTATCAGTGTCTCGGAG 58 17137887 17137967 TGCATTGTCTATTCATGCGA 58 NA Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074380,FBtr0074381 1 2 2 61 X 16973293 16973316 CCCGATTTGATAGTCTTTGATCTG 59 16973336 16973354 ATCACAGGACGCAGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 1 5 5 85 X 16719520 16719541 CTGGATGGTACTTCGAATTTGG 59 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 CG9609 FBgn0030787 FBtr0074356 2 1 1 130 X 16680528 16680606 ACAGGGATTAAGAAGCACG 57 16680416 16680434 CACTTCACCGTCTTCTTGG 58 NA Drosophila melanogaster 61 CG9672 FBgn0030777 FBtr0074361 3 1 1 259 X 16600840 16600858 TTGGACTAATCCTTGTGGC 57 16600508 16600526 GCCATTGTAGAGATCCACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 1 2 2 80 X 16545984 16546007 CTATGTACTATTCCACTCGTTGTG 59 16546045 16546126 TCGCCGTATGGTAATTTGAC 58 NA Nonspecific Drosophila melanogaster 61 CG9782 FBgn0030763 FBtr0074288 1 1 1 207 X 16510368 16515371 CTTCAACATCTGCCTGCTC 58 16510179 16510197 TTCCTCGTCATACTCCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 Muc14A FBgn0052580 FBtr0074205 1 1 1 80 X 15942638 15942659 GGACACTATCAACATCTCTTCC 58 15942698 15943454 TGCTTTCTTCACTCTTGACTC 58 NA Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191,FBtr0074190 2 2 2 233 X 15678787 15678805 GTGGGCACCAATAATGTGC 59 15678504 15678522 CAAACCCTTGTCAATGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8117 FBgn0030663 FBtr0074050 1 1 1 60 X 15538512 15538530 CGATCCGAAGAATCCAGAG 57 15538553 15538572 CTCTTCGGGCGTTATTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7860 FBgn0030653 FBtr0074045 1 1 1 66 X 15463956 15463974 ACCTATGCGGATAACTGCC 59 15464004 15464022 TGTAACGCATGAGGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42300 FBgn0259196 FBtr0299680 2 1 1 60 X 15449983 15450001 AAATGGACCCGAAATCCCA 59 15449874 15449960 GAATTGGACACGACTTCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 3 2 5 90 X 15271621 15272237 CATGCCAAATCCATCTATTCAC 57 15266200 15266220 CCACGAATTGCATAATAGGGA 58 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110968 3 1 3 80 X 14966671 14967979 GAAGATAATGTGCCAGTTCCC 59 14966611 14966631 GATCTTATTGGATAGCCGTCC 58 NA Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 3 2 2 104 X 14944077 14944097 TTGAGCTAATGAAGCCTTTCG 59 14944161 14944242 TCTTAAAGGCTTGACTCTCGA 58 NA Drosophila melanogaster 61 CG9521 FBgn0030588 FBtr0073985 3 1 1 60 X 14746259 14746278 TTATGGTTCAAACCGAGGGA 59 14746218 14746238 GACACAATCACCTCCTTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 1 2 2 116 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100700 14100720 CATCCGTGACTCCAAATATCC 58 NA Drosophila melanogaster 61 Ste:CG33236 FBgn0053236 FBtr0300085 2 1 1 110 X 13954939 13954957 TCTGATACACAGCTGGACG 59 13954787 13954865 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ste:CG33243 FBgn0053243 FBtr0300092 3 1 1 110 X 13946055 13946073 TCTGATACACAGCTGGACG 59 13945903 13945981 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rtc1 FBgn0020909 FBtr0073820 3 1 1 115 X 13652011 13652030 CAAGATGTCGGGTAATTCGC 59 13652108 13652192 GTGTATCCTCCGACTCCTC 58 NA Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 2 1 1 288 X 13450736 13450860 GTGACAAACGCCAATTGAC 58 13451112 13451130 TTGATCAAATTGGGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15754 FBgn0030492 FBtr0073782 1 1 1 93 X 13422639 13422864 TATCTTTGGCTACTCCATTCCC 59 13422918 13422936 ATAGAAGCCCTCAACCACC 59 NA Drosophila melanogaster 61 CG15753 FBgn0030491 FBtr0273441 2 1 1 153 X 13415079 13415097 GACGCAAACAAGTCTCTGC 59 13415214 13416802 GACAAACAGCGATTCCCTC 58 NA Drosophila melanogaster 61 comt FBgn0000346 FBtr0073754 3 1 1 108 X 13153746 13153838 GAAGAAGACTGTCTCCCAGG 59 13153908 13153927 ATTGAAGACCAGTGATTGGC 58 NA Drosophila melanogaster 61 CG32645 FBgn0052645 FBtr0073725 1 1 1 87 X 13045865 13045884 CATGGATCACATCACCTGTC 58 13045934 13046135 GAGCATGCACATCTCATCG 59 NA Drosophila melanogaster 61 CG4330 FBgn0030452 FBtr0073724 2 1 1 174 X 13025866 13025885 GCCTCCTGTTACTACGATCC 59 13026982 13027000 AAATGTGACGCGTCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073668,FBtr0073669 1 2 2 120 X 12354609 12355032 CAGCAATAAGGTGCTGTCG 59 12354507 12354525 GTATGACTTGAGCGTCGAC 58 NA Drosophila melanogaster 61 CG15740 FBgn0030340 FBtr0073605 1 1 1 186 X 11739894 11740086 AGATGAATTTCTTTGGCGCC 59 11739727 11739745 TAGTTGCTCTCCTGGAAGC 59 NA Drosophila melanogaster 61 Rab9D FBgn0067052 FBtr0071490 1 1 1 60 X 10483292 10483313 TTTCTCGGATAACCAATTCACC 58 10483334 10483352 CTCCCTTCTATCCAAGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 1 2 2 80 X 10301262 10301282 AATTACTGTGGAGAGTTCGAC 57 10301323 10301407 TTTCAGGATCTGGAATGAGC 57 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585,FBtr0071439,FBtr0112675 3 4 4 84 X 10121983 10122066 AGTGACTCTGCTCATACGC 59 10122113 10122132 AATCCCAGACTTACTGCGAG 59 NA Drosophila melanogaster 61 CG32691 FBgn0052691 FBtr0071435 1 1 1 60 X 10058724 10058742 CCCTCATCCTGATTCTGGT 58 10058766 10058784 AATCACGACTGCAGATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32685 FBgn0052685 FBtr0071489 3 1 1 82 X 9966709 9966790 ATAATCTAGCCCGCTTGGA 58 9966645 9966663 CTCCAGCTGGAGATAGTCC 58 NA Drosophila melanogaster 61 Dsor1 FBgn0010269 FBtr0071313 2 1 1 86 X 9143720 9143809 CTCAAGACCCTGCTGAGTC 59 9143859 9143877 GTCCATTGTCTTGCACACC 59 NA Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 3 2 2 93 X 8985202 8985453 CCACAGCGTATTGAGAATGC 59 8985509 8985527 AATCGACCTTGATGCTGCT 59 NA Drosophila melanogaster 61 CG15343 FBgn0030029 FBtr0071178 2 1 1 93 X 8166787 8166810 CGATTAACTACGATGATCTCAAGG 59 8166646 8166735 CAAGCGGTATAGCTTGCTG 59 NA Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071135 3 1 2 99 X 7795033 7795288 CGACAATATGAAGCTCAACGT 59 7794954 7794972 ACGCTTCTCGTAGAAGACG 59 NA InUTR Drosophila melanogaster 61 Ir7b FBgn0029965 FBtr0071149 2 1 1 107 X 7760114 7760185 TTCGATGAGATCTTTGGCC 57 7760025 7760045 CATGAAGTAGTAGGTGGACTG 57 NA Drosophila melanogaster 61 Pdp FBgn0029958 FBtr0071076 1 1 1 80 X 7628095 7628114 CGGGAGTTCAGTTTGAATGC 59 7627505 7628055 CCTCAGAACAAGGTTAACATCG 59 NA Drosophila melanogaster 61 CG32719 FBgn0052719 FBtr0071083 2 1 1 101 X 7405678 7405759 TGAAGAAGATCTAAACGAACCC 58 7405598 7405616 GTTTGGAATGAGTTGGCCA 58 NA Drosophila melanogaster 61 cm FBgn0000330 FBtr0071033 1 1 1 86 X 6904468 6904562 GGCAAGAGCAATGTAAGCA 58 6904400 6904418 GTTGTTGGTGTACCTCACG 58 NA Drosophila melanogaster 61 Cht11 FBgn0029913 FBtr0071041 3 1 1 99 X 6742654 6742675 ACATCAATTACACGGTTCAGTG 59 6742511 6742597 TTAACCAACGTAAATGAGTGGC 59 NA Drosophila melanogaster 61 CG3973 FBgn0029881 FBtr0070948 1 1 1 80 X 6542144 6542222 TCATCTTTGTGCGGATCCT 59 6542264 6542284 TGTCCAGATAGTGGGATAGTG 58 NA Drosophila melanogaster 61 CG33664 FBgn0053664 FBtr0302417 3 1 1 68 X 6278309 6278386 TTGACTACTCCGAAGCGAG 59 6278418 6278436 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15767 FBgn0029809 FBtr0070813 1 1 1 60 X 5684155 5684176 ATCGAGTAACTTAAGGTGTCCC 59 5684194 5684215 CTCATTCTCACCCAGAGTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32758 FBgn0052758 FBtr0070843 1 1 1 87 X 5617384 5631139 CTGGAAGTAAATGGCGTCAG 59 5617316 5617334 TCAGAGTTAGGCAGTCACC 58 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070792 3 1 2 195 X 5389801 5390042 GGCTTACTTGTAGTTCAGAAGAG 59 5389628 5389648 GAGTACTTGAAGACGAAAGGC 59 NA InUTR Drosophila melanogaster 61 CG15472 FBgn0029724 FBtr0070736 2 1 1 60 X 4663829 4663847 GCAGACCATATGTCTGGGA 58 4663787 4663807 TAATTGGCTATGCTTACCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp2C1 FBgn0022768 FBtr0070685 3 1 1 95 X 4579209 4579229 TTCTGGTCTGATCAGGATGAG 59 4577957 4579152 TGGCCATTTCTCTTGTTCC 58 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 1 3 3 129 X 4554208 4554298 ACAGATCGTGGTGATATCCAG 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 brn FBgn0000221 FBtr0070638 1 1 1 60 X 3999130 3999148 GCACGTGTTTCAGACATCC 59 3999172 3999190 CTCCAACGAAACGTACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 VhaAC39 FBgn0028665 FBtr0070611 2 1 1 137 X 3775140 3775496 CCTTGGAGGATCTCAAGCT 58 3775597 3775615 TCCTCATGTGCTGGAACTC 59 NA Drosophila melanogaster 61 Crg-1 FBgn0021738 FBtr0070599 3 1 1 60 X 3689253 3690705 ATGGATATCGCATCTACTTCCT 58 3690724 3690744 GAGAACCGTTAACGTAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070587 2 1 2 134 X 3467502 3467520 AAAGTGAACGATGACACCG 58 3467319 3467404 ATTATCGGGCGTATTCAGC 57 NA Drosophila melanogaster 61 CG2680 FBgn0024995 FBtr0273279 1 1 1 145 X 2600880 2600994 GAATCGCTGCAAGTCAAGG 59 2600753 2600771 TCCTGAAGGTGCCTAATGG 59 NA Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 2 2 2 105 X 2342608 2342626 GGACAAGATCGTCAAGGAC 58 2342695 2342834 ATACTGTTTGCGGAGTCTG 57 NA Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 2 2 2 91 X 2167972 2168066 TTGTATAGGAAACGCTTCCCA 59 2167901 2167919 GAGAATTCATCGGTGTCGC 59 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 1 3 3 95 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800185 1800205 CAGCAGATAAAGGTACTTGCT 58 NA Drosophila melanogaster 61 mRpL16 FBgn0023519 FBtr0070314 2 1 1 106 X 1784397 1784416 AGTCTCCCAGCTCTTTAAGC 59 1784561 1784654 GCTCCACATTCTGGTATTTAATAGG 59 NA Drosophila melanogaster 61 Tsp2A FBgn0024361 FBtr0070211 1 1 1 148 X 1240709 1241316 CAAGCTTCCGAAACGATGG 59 1241428 1241446 CTCAACCAGACGGTTAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11382 FBgn0040367 FBtr0070205 1 1 1 60 X 1104678 1104697 TAAGTACGCACCATCTACCA 58 1104720 1104738 GGTCTTGTGTTCATTCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11379 FBgn0040362 FBtr0070198 1 1 1 60 X 1074539 1074557 GCTCTTACTGGAGACAGGC 59 1074581 1074599 CCACAGTTTGCTAAGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14634 FBgn0040892 FBtr0110804 1 1 1 65 X 756881 756899 AAAGAATGGAAAGCAGCGG 59 756928 756946 TCCGTGGATATCACGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16989 FBgn0025621 FBtr0070140 1 1 1 60 X 688639 688660 TGATAAAGAGTAGTGACCCTCC 58 688681 688699 ACCAGCATTTCCATGACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070131,FBtr0070133,FBtr0070130 1 6 6 80 X 631308 631553 CTGGATATACAATGAGACACAACTG 59 631591 631609 TTCGAGATGAGCAGGTCAC 59 NA Drosophila melanogaster 61 CG3176 FBgn0029524 FBtr0070078 2 1 1 71 X 376454 376559 GCGTGACTTTATTTGGTAATCG 58 376591 376609 TGAGGAACATCTGGCAGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979 3 1 3 133 X 149333 149351 TATGATCCCTTGGAGGACC 57 149448 149820 AACTACACCGTTTCCAGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42620 FBgn0261335 FBtr0302239 2 1 1 60 U 8502235 8502253 CAGGAGTTATTGTCCGCCA 59 8502274 8502295 CAATTTCTATTTGCTGGCACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40530 FBgn0085494 FBtr0302228 3 1 1 95 U 8029859 8029934 TATTCTGCGCAACCATTGG 58 8029782 8029800 TTCAGAGTGCATTCTGTGC 58 NA Drosophila melanogaster 61 CG40378 FBgn0058378 FBtr0302337 3 1 1 80 U 72385 72405 GTGTACAGATAAACGACTCCG 58 72443 72739 CATCTAAATATCCGGAAAGGCTC 59 NA Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 1 2 2 81 4 1137189 1137210 TCATATTCCCTTCTGCATACCA 59 1137071 1137147 GTGACCCTTCAGCTTTGTG 59 NA Drosophila melanogaster 61 Actbeta FBgn0024913 FBtr0089209 2 1 1 87 4 1099251 1099272 GAGCAAATAAACCACATCACAG 58 1099132 1099205 GCCTTATCTATTCCCTTCTCC 57 NA Drosophila melanogaster 61 Slip1 FBgn0024728 FBtr0089090 1 1 1 80 4 684897 684917 TACCGACAACTTCATAGAGCA 59 684958 685624 AGCGTTACTTCCTCAATGTC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305c FBgn0082974 FBtr0113593 1 1 1 60 3R 24429097 24429116 AGTACCCTGACACCTAACTG 58 24429137 24429157 GCGTTTAATAAGCTAACTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1295 FBgn0083055 FBtr0113584 1 1 1 60 3R 16648390 16648411 CTAGATAAAGTGCCAGAATCGG 58 16648432 16648450 ATATTCCAGCTCTGCAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1275 FBgn0086663 FBtr0091602 3 1 1 60 3R 5604137 5604156 ACGGAAATACGTGTTTAGCA 58 5604179 5604197 CTCTTACTTTGGCCACCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3186 FBgn0086662 FBtr0091697 2 1 1 60 3R 1423823 1423842 AACACTTGTTCAACTTGCAG 57 1423782 1423804 AGAGTCAGTATACCAAGTGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 1 1 1 65 3R 26038648 26038668 GTTTGCTTTCATCATCCTGAC 57 26038694 26038752 TTTATATCCGTCAGCCAACC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Prosalpha3T FBgn0261395 FBtr0085738 2 1 1 60 3R 26948798 26948817 ATCAGTTCAACTTCGGTGAG 58 26948757 26948776 ATATCGCAAAGGTTCGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 1 4 4 116 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650760 26650778 CTGAAAGCATCTTGCTGGC 59 NA Drosophila melanogaster 61 CG31010 FBgn0051010 FBtr0085725 1 1 1 139 3R 26531793 26531811 ATTCAGAGTGCAGTTTCCA 57 26531607 26531625 ATGTACAGCTTTGGCATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 1 2 2 85 3R 26520526 26520545 ATAGAGACCTCAAACCGGAG 58 26520392 26520480 TTCCACTTTCTTGGCAAATCC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302606,FBtr0085674,FBtr0085678,FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 13 13 81 3R 26421160 26421181 GGGAGACTATTGTGGAGATCAG 59 26421039 26421118 TTGTTGGCATCCTTTGTGC 59 NA Drosophila melanogaster 61 CG31371 FBgn0051371 FBtr0302522 2 1 1 90 3R 26328530 26328610 GATTTAAGCTGGGCTCCTC 58 26328458 26328476 GATTCTAGCCAGAACCTGG 57 NA Drosophila melanogaster 61 CG9743 FBgn0039756 FBtr0085571 2 1 1 84 3R 26022751 26022826 TACGACAAGAACCTCATGTCC 59 26022687 26022706 AAACGTGGTGGTAATTGTGC 59 NA Drosophila melanogaster 61 CG11498 FBgn0039749 FBtr0302562 1 1 1 90 3R 25981534 25981644 TTTACCAGATTGACCACCCT 58 25981463 25981481 GATTAGCGAACAGACGCAC 59 NA Drosophila melanogaster 61 Cog7 FBgn0051040 FBtr0085509 2 1 1 109 3R 25758181 25758259 GCAATGATCTAAAGGGAGTCTG 59 25758093 25758111 GAAGTCCTCCACTTGGGTC 59 NA Drosophila melanogaster 61 capa FBgn0039722 FBtr0085514 2 1 1 145 3R 25739319 25739928 TTCAGTACAGCTGAGACGG 59 25739192 25739210 TAAATGCCGTCGAGGACTC 59 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 1 2 2 84 3R 25570661 25570679 ATATGCCTGGAAGGACACG 59 25570537 25570614 CCTTAAGCAAGCTTCTTCCG 59 NA Drosophila melanogaster 61 CG31445 FBgn0051445 FBtr0085401 1 1 1 80 3R 25067900 25067971 CTCTGCAAACCGGATTTCC 59 25067838 25067859 AGTAACGTTCCTGGGTAATCTC 59 NA Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 1 2 2 80 3R 24970924 24971003 ATCAAGACCTACATGGGCTC 59 24971046 24971064 GAACTTGGAGTTGAAGCCC 58 NA Drosophila melanogaster 61 CG31131 FBgn0051131 FBtr0300438 1 1 1 60 3R 23788445 23788463 CCACAACAACTTCGAGTCC 58 23788403 23788424 GTACTGTCTGAATTGCTTTCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 3 3 3 84 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758241 23758260 GTTGCAAACCTCGATCACAG 59 NA Drosophila melanogaster 61 CG5017 FBgn0039553 FBtr0085246 3 1 1 81 3R 23739077 23739098 GTCGTTCTTTGAGTTCTTCTCG 59 23739139 23739212 CAGCATAGCATTGACGTCAC 59 NA Drosophila melanogaster 61 CG34353 FBgn0085382 FBtr0112563 3 1 1 80 3R 23630155 23659631 CACTTTGAGAGCGTGTCTG 58 23630093 23630114 GAATTTGAATGTCTCCGAACGT 59 NA Drosophila melanogaster 61 Sce FBgn0003330 FBtr0085245 1 1 1 135 3R 23506476 23506494 GATTTGCCAGAGGCTTGTC 59 23506302 23506380 CCATAGGTTTGTTTACCTTCCA 58 NA Drosophila melanogaster 61 CG17189 FBgn0039485 FBtr0085105 3 1 1 100 3R 22928029 22928048 CCCAAATGCGAATAGATGGT 58 22928106 22928189 GTCCAGATCATCTATTTCCATGAC 59 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 2 2 3 107 3R 22788798 22788893 TCAGCTTCACTGAGTTCGT 59 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 CG14244 FBgn0040607 FBtr0085040 3 1 1 77 3R 22552058 22552076 CAGCGTTATTGTTTGGACC 57 22552117 22552135 CTGGCACTTATGAAGGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5447 FBgn0039427 FBtr0085012 3 1 1 221 3R 22278737 22278822 AGGGCATGATTGAAAGACAC 58 22279333 22279351 CCTTGGTGTTGTAAATGCG 57 NA DesignRelaxed Drosophila melanogaster 61 CG14556 FBgn0039413 FBtr0273389 1 1 1 60 3R 21952627 21952645 TTCTCGATCGTTCAGAGCA 58 21952669 21952687 CAGTCAATATCGTGTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0084909,FBtr0300819,FBtr0084910,FBtr0084911 3 5 5 86 3R 21711733 21712037 TGCACAGCGATTATAGCCA 59 21712087 21712105 CTTTCCATCTGTGCATGGC 59 NA Drosophila melanogaster 61 CG4730 FBgn0039355 FBtr0084934 3 1 1 88 3R 21503311 21503329 CTCAGGAATCACGAGTGCA 59 21503180 21503260 ATGCGTAGTTTGTTACGAGC 59 NA Drosophila melanogaster 61 CG5053 FBgn0039352 FBtr0084898 1 1 1 88 3R 21489963 21490043 ACCAATAGGCAAACTGTGGA 59 21490094 21490112 GTGTCAGTGTTGTGCAGAG 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113350 1 1 5 60 3R 21149599 21151174 TTGTTTAAGATGTGCGTAGTCG 59 21149560 21149580 AAGAATCACCGTGATTCAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG9996 FBgn0039273 FBtr0113285 2 1 1 91 3R 20899624 20899897 TAACGAATTGCAGACTGGGA 59 20899552 20899576 CTGACTTAATCATAACCAGAGTCTC 59 NA Drosophila melanogaster 61 CG31115 FBgn0051115 FBtr0290053 3 1 1 82 3R 20863474 20863492 CAGAAGGTCCTGATAACGG 57 20863538 20863614 CACACCAGAATCTTTGCCT 58 NA Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0084715 1 1 2 99 3R 20745297 20745655 CCATAAACGAGTTCACCCA 57 20745718 20745736 GAGTTCTTCTCGTACAGCC 57 NA Drosophila melanogaster 61 CG7016 FBgn0039238 FBtr0084707 3 1 1 60 3R 20689442 20689464 ATCCAGATAATGAGTCTAGCACC 59 20689484 20689502 GTTGGAAAGATGGGTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ast FBgn0015591 FBtr0084744 1 1 1 100 3R 20590646 20590666 GCTCAATTCCAAATCGATCCT 58 20587544 20590584 CTACTGCTGAGCGAATTCC 58 NA InUTR Drosophila melanogaster 61 CG33340 FBgn0053340 FBtr0084611 3 1 1 60 3R 20189249 20189270 GCTTCGACGATATCTACTACGT 59 20189291 20189309 CATGTCTGCCAGTACTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13609 FBgn0039170 FBtr0084560 2 1 1 60 3R 20053499 20053517 GACTGGATCGCTGAATTGG 58 20053539 20053559 CTTGTGACTAATGCTTGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5524 FBgn0039164 FBtr0084573 3 1 1 80 3R 20015069 20015151 TGTTTACAGATGAAGTGAACCG 59 20015010 20015029 AATACTGACGCGATAACCAC 58 NA Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 3 2 2 80 3R 20014179 20014252 GTGGCGATATGGAGATTCTC 58 20014118 20014136 CCTCCGAACTGTACTCCTC 58 NA Drosophila melanogaster 61 CG31133 FBgn0051133 FBtr0084583 2 1 1 60 3R 19973423 19973444 GACTTTGTCTCTAAGCGAATCC 59 19973384 19973405 GCAAGAAATCATAGTGCTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 1 2 2 79 3R 19557824 19557842 TCTTGAGTCGCTTAAGGGC 59 19557702 19557782 ACTTGTTAATATCGCCCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445,FBtr0084472 2 2 2 81 3R 19542148 19542230 TGCTACAGGAATCCAGTACC 58 19542086 19542104 AGATAATCGGACTGGCAGC 59 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 1 3 3 80 3R 19348982 19349057 TTCGCGAAATATGGCTCTC 58 19348920 19348938 ATTGGTGGGATCGATTGGT 59 NA Drosophila melanogaster 61 Ir94g FBgn0039079 FBtr0273202 3 1 1 60 3R 19310842 19310861 TGGAAGATTTACGAGGAGCA 58 19310882 19310902 CCTTGGAATACCGAAACACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4393 FBgn0039075 FBtr0301085 1 1 1 80 3R 19204906 19204925 GCAGGATTACTTCATCTGGA 57 19204779 19204865 CTCCTCAAAGACATTGTTCAC 57 NA Drosophila melanogaster 61 CG6738 FBgn0039053 FBtr0084353 2 1 1 86 3R 18925917 18925990 GAGCGTATACGATGGATTCTC 58 18926038 18926056 CTTAACTCCGGCTGTATCG 57 NA Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 2 2 2 87 3R 18917605 18917623 AAGTGGGAGAACAACGAGG 59 18917674 18917786 TGCAAACGGTGTAATCCAC 58 NA Drosophila melanogaster 61 CG17121 FBgn0039043 FBtr0084361 2 1 1 80 3R 18871185 18871258 CTACATAATGACCACCAAGGA 57 18871125 18871143 GCTAAGGCATTTACTGCCA 58 NA Drosophila melanogaster 61 CG6972 FBgn0039008 FBtr0084305 3 1 1 81 3R 18529246 18529264 ACACTGATGAACTACGCCC 59 18529306 18529386 AGAGATTGCACATAAACATGGC 59 NA Drosophila melanogaster 61 CG6972 FBgn0039008 FBtr0084305 2 1 1 81 3R 18529306 18529385 GCCATGTTTATGTGCAATCTC 58 18529427 18529446 GACCATTGTATTCCCACTCC 58 NA Drosophila melanogaster 61 btn FBgn0014949 FBtr0084278 2 1 1 60 3R 18412161 18412179 GAAGCGAACGATCAATGGT 58 18412119 18412139 TTTGGCTTGGAAGTTCTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33093 FBgn0053093 FBtr0084287 3 1 1 81 3R 18356839 18356860 CAGGAGCACTCTTCATAAACTG 59 18356722 18356799 ACTACTCTATGTTGCAAAGCG 58 NA Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084291,FBtr0084290 3 2 2 64 3R 18315648 18315666 CTCATCAAGGGCACTAAGG 57 18315539 18315558 TAGAAGTCATTGGGACCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 2 3 3 101 3R 18217015 18217095 ATTGAGTGAATTCGGCGTC 58 18217156 18217178 CTGCTCAATACGGATGAATAGAC 59 NA Drosophila melanogaster 61 CG31176 FBgn0051176 FBtr0084114 1 1 1 86 3R 17544099 17544118 CAAGTCCTCCCGAAATATGC 58 17499434 17544052 GTTATGTATCTTCTGGCCTGC 58 NA Drosophila melanogaster 61 CG7079 FBgn0038849 FBtr0084043 2 1 1 150 3R 16873953 16873973 GATATCCACTCTCAGGGAACG 59 16873753 16873841 ACATAATCCAGCGGTCCAG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113256,FBtr0113255,FBtr0083959,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 3 8 8 100 3R 16623384 16623473 GCCTCGAATATTGAGGTCTC 58 16623536 16623554 TGCATCATTTGCATCATGC 57 NA Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 3 2 2 81 3R 16457433 16457513 ATTTGGGAACGCAGAAACG 59 16457370 16457388 GCTCCTTCCAATAGACGCA 59 NA Drosophila melanogaster 61 CG5466 FBgn0038815 FBtr0083913 3 1 1 126 3R 16445342 16445593 CTCCTTGCGTTCCAATCTG 58 16445682 16445701 CACTATCTTGTCCTGACCCA 58 NA Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0113252,FBtr0083899 2 2 2 60 3R 16152599 16152619 ATCAATCACATCAAGACGCAC 59 16152485 16152503 AGTTCAACAGGGAAGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Gr92a FBgn0045471 FBtr0083865 2 1 1 235 3R 15947567 15947587 CCTGGCATTGATTTACAAGGT 59 15947781 15947859 GAAGGAATAAAGTATCCAGCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG10887 FBgn0038773 FBtr0083864 3 1 1 96 3R 15940787 15940861 ATTCAATAGGAGGAGCCCG 59 15940921 15940939 AGAATGTGAACGGCTTTGG 58 NA Drosophila melanogaster 61 MED25 FBgn0038760 FBtr0083825 2 1 1 60 3R 15835002 15835022 CAGTTTGTTCAACCTATGGTC 57 15835043 15835062 CTTTCGATCGTCTCCATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368,FBtr0089367 1 2 2 97 3R 14550958 14550976 AGCTGATCAGGCAGTTCTC 59 14551034 14554513 GTAATAGGCCCAGTTATCCTCC 59 NA Drosophila melanogaster 61 CG14300 FBgn0038643 FBtr0100288 3 1 1 122 3R 14519306 14519386 GAAGTCTGTTGTTGCCCTG 59 14519202 14519221 TGATGCGTATAGGTCTGTCC 59 NA Drosophila melanogaster 61 Gos28 FBgn0044871 FBtr0083661 3 1 1 110 3R 14490711 14490801 GATTTCCAGTCTCATTCAGCG 59 14490872 14490891 TAGTTGAAGGCGTAGAGCAG 59 NA Drosophila melanogaster 61 CG18139 FBgn0038522 FBtr0083459 1 1 1 116 3R 13393829 13393848 CATATGATGGACGACGAGGA 59 13393927 13393945 CTTGCTTTCCAGGCAAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17283 FBgn0038505 FBtr0083437 2 1 1 60 3R 13234705 13234724 AAGATCAACAAGGTCATCGG 58 13234747 13234765 CGCACTTCATCCAACACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17283 FBgn0038505 FBtr0083437 1 1 1 60 3R 13234704 13234724 CAAGATCAACAAGGTCATCGG 59 13234745 13234764 GCACTTCATCCAACACTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 2 2 2 103 3R 13224493 13224749 GTGATGAAGGCATCAAGCG 59 13224408 13224429 GCTGTACAGATAAAGTTCCGTG 59 NA Drosophila melanogaster 61 m-cup FBgn0038488 FBtr0083414 2 1 1 80 3R 12973061 12973144 TGATATCGTCAAGTTCCTGGT 59 12973001 12973019 GAGTTAATCAGGCAGGTGC 58 NA Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 3 2 2 85 3R 12819315 12819333 ACTTTAATCCTGGACCGCA 59 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352 3 1 6 87 3R 12484779 12558421 AAGTACAAATGGTCTGCGA 57 12484710 12484728 ATGATTCGTGTGGAACTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Gr89a FBgn0038440 FBtr0089695 3 1 1 102 3R 12323822 12323842 GGTGAGGTCTGCTAAATTGAG 58 12323686 12323704 GAGCACAGGAAATGGAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 pad FBgn0038418 FBtr0301514 3 1 1 90 3R 12170579 12170658 CATAGGCGAATTCACACGC 59 12170712 12170730 TCTCGTAGTGCAACTTGGT 59 NA Drosophila melanogaster 61 Mat89Ba FBgn0261286 FBtr0083275 1 1 1 80 3R 12094582 12094670 GGACTACTAAGATCTGCATACTC 57 12094524 12094542 CCATACAATGCCCAGTTCC 58 NA Drosophila melanogaster 61 GATAe FBgn0038391 FBtr0083218 3 1 1 104 3R 11844306 11844385 GATAGTTCAGCCAGTACCC 57 11844452 11844471 TTATTCGATGATCGCTCTGG 57 NA Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 3 2 2 80 3R 11798316 11798425 GCAAGAAGTATTTGGCCCA 58 11798254 11798275 CATACTGCAGGAAGTGAATGAG 59 NA Drosophila melanogaster 61 CG5623 FBgn0038357 FBtr0083197 3 1 1 100 3R 11593042 11593061 CAATCTGCGTTGCAATAAGC 58 11592895 11592913 CTCCCTCCTTACAAACGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083157 3 1 2 116 3R 11334278 11334398 TAACCTAACGCAACTCTCCG 59 11334181 11334201 AGCGAGAGTATGTCATTCTCG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963 1 1 13 89 3R 11112206 11112224 CAAGGACATTTGGCATCGT 58 11112276 11113054 TTAGTTTCGCTTGTGGATCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 86 3R 11002137 11002155 TTCCAGCTAACTACGACGC 59 11001999 11002088 CATAGCGAGATGGGTACCTG 59 NA Drosophila melanogaster 61 CG33331 FBgn0067628 FBtr0082998 3 1 1 60 3R 10712825 10712843 GAAGTTCACTGCCTACGGA 59 10712865 10712885 GAAATCGCCCTTGTAACTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7362 FBgn0038258 FBtr0083015 1 1 1 211 3R 10577776 10577795 TCCTGCGATATTGTACTCGA 58 10575270 10577605 CTAGTACTGAAAGTGTATGCCT 57 NA DesignRelaxed Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959,FBtr0112893,FBtr0082958 2 3 3 168 3R 10430160 10430178 AACACGAGTGGATCGAGTG 59 10430309 10430416 AATTGAATGGTTTCCGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 1 3 3 97 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 CG31326 FBgn0051326 FBtr0082901 1 1 1 80 3R 10045403 10045422 CTATTCCAACAATACCGCCC 58 10045285 10045361 GCTTAGGATATACACCGCCA 59 NA Drosophila melanogaster 61 CG9649 FBgn0038211 FBtr0082902 3 1 1 85 3R 10041784 10041802 TCCACGAACAGTACAATCC 57 10041650 10041737 GTAATCGCCAATATCAACGTG 57 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 1 6 6 80 3R 9204503 9204740 TTGCCCTACATCTACAATCC 57 9204442 9204461 GTCCAGTTCACTTACATCGT 57 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114500 2 1 6 219 3R 8521769 8521862 TATGAAGGCAATGGATGCC 58 8522469 8522487 GTTGAGACTCCCGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 2 1 1 74 3R 8252668 8252792 AGAGATCGTTGGAGTTCCT 57 8252830 8252848 GAAAGTTGTTTGCGTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 lig3 FBgn0038035 FBtr0082600 2 1 1 80 3R 8224927 8225010 GACCTAGAGAAGCTTAGAACG 57 8224867 8224885 AGTATCGAGACAGCTTTGG 57 NA Drosophila melanogaster 61 Cyp313a2 FBgn0038006 FBtr0082618 2 1 1 80 3R 8062023 8062041 CTCCTTTGTTGGTCAAGGT 57 8061906 8061982 AATGTGGTTTGAGTAGCTATGG 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 1 3 3 82 3R 7778414 7778432 ATGAAGATGAGCGTCAAGC 58 7778478 7778557 TATGCGAGCTTTCAACTCC 58 NA Drosophila melanogaster 61 Cad87A FBgn0037963 FBtr0082513 1 1 1 80 3R 7725213 7725761 CTTCTTGTCATACAAGGCCA 57 7725152 7725172 GCATCAGTTACAGAAATCCGT 58 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089918 3 1 3 85 3R 7643776 7643794 TTCGTTGTGAAGCTTCGTG 59 7642461 7643732 GCGGAATATCTCAATATACCAGAG 58 NA Drosophila melanogaster 61 CG6719 FBgn0037893 FBtr0082406 3 1 1 114 3R 7235011 7235029 GAGTATCCGCTAGACGAGG 58 7234854 7234936 TAGTTGTGATTTGATCCCTCAG 58 NA Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 3 2 2 283 3R 7041669 7041687 CTAAGAAGGACGCGAAGTC 58 7041336 7041422 CTTGATCAGACCCTTCTCG 57 NA DesignRelaxed Drosophila melanogaster 61 CG31391 FBgn0051391 FBtr0082321 2 1 1 60 3R 6529708 6529728 CCCGAAGAATCTCTACAACAC 58 6529668 6529687 GTTTGAGAACCGAACTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3996 FBgn0037800 FBtr0082224 1 1 1 80 3R 6066652 6067265 GAGCCTGCTAGAAGAACGT 59 6067306 6067327 AGTTCACTGGAATAAGATCCCA 59 NA Drosophila melanogaster 61 CG34108 FBgn0083944 FBtr0110788 1 1 1 67 3R 6051480 6051554 GTGAAACCAAGAAGCTACTCG 59 6051583 6051601 TTTGGCCAACACTTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 3 2 2 134 3R 5947592 5947610 AGGCTTTACCAATCGTGTG 58 5947761 5947784 GGATATAGGTAATACCCAGATCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mtTFB2 FBgn0037778 FBtr0082173 1 1 1 99 3R 5871968 5871986 GCACTTGATCAACTCCCTC 58 5872045 5872128 GGTGAGATGTATGTATATGGGTG 58 NA Drosophila melanogaster 61 CG34302 FBgn0085331 FBtr0301078 3 1 1 100 3R 5650463 5650582 TATCTAACCTCAAGCGAAGC 57 5650382 5650402 CTTGTTAAGCTCGTTGTTCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Snap24 FBgn0028401 FBtr0082163 1 1 1 72 3R 5588321 5588339 AGAACTTGAGTGGCATGGA 59 5588267 5588285 TCGTCCTTGATGTTCACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16789 FBgn0037712 FBtr0082071 1 1 1 80 3R 5393207 5393225 CCAAGACGAGGAAGTTAGC 58 5393267 5393341 TCGTTAAACAGATCGATCTCC 57 NA Drosophila melanogaster 61 tgo FBgn0015014 FBtr0082005 3 1 1 104 3R 4845606 4845625 CCAAGTACCTCTGTACACCC 59 4845379 4845397 TTGTCCTGTATGTTCGCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Prosbeta3 FBgn0026380 FBtr0082010 3 1 1 60 3R 4831267 4831285 CCATTGTGAACGCATTCGA 59 4831225 4831243 ATAATGTAGACGGTGGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11966 FBgn0037645 FBtr0082014 3 1 1 233 3R 4788146 4788164 AACCACTATCCACTACGGA 57 4779568 4779586 TTCATTGTCAGTGGACCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0113206,FBtr0301787,FBtr0081957 1 4 4 80 3R 4767486 4767505 ATTGCCGAGGGTATCATCTC 59 4767547 4767634 GACTTTGGTTCCCTGAAGAC 58 NA Drosophila melanogaster 61 Tcp-1eta FBgn0037632 FBtr0081918 1 1 1 109 3R 4628713 4628804 TCAACCTCTTCCAAGGCTG 59 4628877 4628895 CATAATTGCGTCGTGGAGG 59 NA Drosophila melanogaster 61 mRpS18A FBgn0051450 FBtr0081897 1 1 1 80 3R 4388179 4388198 AGTACGAAGTACCATTGCTC 57 4388022 4388137 TCCTGCTTCTCATGAATCTC 57 NA Drosophila melanogaster 61 CG11741 FBgn0040531 FBtr0112769 1 1 1 60 3R 4354481 4354501 TTCCTCAAGGATTTCGTACCC 59 4354441 4354459 GCTCTTCGTCCTCGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31259 FBgn0051259 FBtr0081871 1 1 1 91 3R 4350283 4350489 CACTGTATACGTGTTTGCTC 57 4350543 4350561 CTGTCGACTGTAGGATTCC 57 NA Drosophila melanogaster 61 CG9626 FBgn0037565 FBtr0081864 3 1 1 80 3R 4123028 4123107 ACGAGAAAGAGAAATTGTCCC 58 4122968 4122986 CATCCGAAGTCTTGACCTC 57 NA Drosophila melanogaster 61 Mcm2 FBgn0014861 FBtr0081827 3 1 1 90 3R 4092882 4092900 AGACCGTTGATGAGATCCC 58 4092954 4093029 TCGTCGATGTTCGTTAGCT 59 NA Drosophila melanogaster 61 CG2846 FBgn0014930 FBtr0081763 3 1 1 93 3R 3738577 3738660 ATCCCAACAGCTAACTTTCC 57 3738503 3738521 CATTATCCACGTTTGCCCA 58 NA Drosophila melanogaster 61 CG2943 FBgn0037530 FBtr0081765 2 1 1 80 3R 3731814 3731917 GATCTGTCCTCTGGAATCCTC 59 3731754 3731772 CAGACTCTGCTCCAACTCC 59 NA Drosophila melanogaster 61 Mst84Db FBgn0004173 FBtr0081586 2 1 1 110 3R 3191217 3191235 GAACCATCATGTGTTGCGG 59 3191125 3191143 AAGGACTACAGCAGGAACC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081580 1 1 2 81 3R 3113074 3113217 CCTACTTTAGATCAATGGTCAACC 59 3113256 3113275 CTGCATCCATTCTCGATGTC 58 NA InUTR Drosophila melanogaster 61 rn FBgn0259172 FBtr0299638,FBtr0299639 1 2 4 125 3R 3127574 3127592 GAATGGTCACGTGAAGACG 59 3126885 3127485 TTGTTGTGCGGCTTATTCG 59 NA Nonspecific Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 3 3 4 183 3R 3100073 3100727 GGAGGATATTGCCTCGACC 59 3099908 3099926 GTTCTTGTTCGGGAAGCTG 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 2 2 2 80 3R 2192121 2192141 ACGAGGTTATCAAGATACGCA 59 2192001 2192082 ACTTGGAAATCATTCGAACTCG 59 NA Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 3 1 1 60 3R 2167802 2167821 GGTCCTTGGATGTGATACCA 59 2167841 2168062 GTAACATTAAGAAACTCCTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Osi12 FBgn0037419 FBtr0078602 2 1 1 133 3R 2104893 2107121 ACTAGAGGAAGGTCGTGGT 59 2107217 2107236 AGATAATCAGTGCCTTGCCT 59 NA Drosophila melanogaster 61 Osi11 FBgn0037418 FBtr0078614 3 1 1 60 3R 2093863 2093882 TATCTGGGACCCTTCATTGC 59 2093822 2093844 GGTATGCCATCTTTAGAATAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10280 FBgn0037395 FBtr0078648 2 1 1 158 3R 1837091 1837398 TGGCGGAAGATGAATACGA 58 1836951 1836970 GATGCCTCATTGGATTGACG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301946,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 9 9 190 3R 1827436 1827454 GGACGGCATCAAGTATGTC 58 1827067 1827282 GGGCAGGATTGATTTCCTG 58 NA Drosophila melanogaster 61 CG2926 FBgn0037344 FBtr0078752 2 1 1 80 3R 1410390 1410904 CATCTGATAAGGATGATGACGA 57 1410331 1410352 GCAATGGTATATCCGTATCCTC 58 NA Drosophila melanogaster 61 Hcs FBgn0037332 FBtr0078683 2 1 1 115 3R 1303170 1303188 TGGGCAGATATTGGTGGAC 59 1303267 1303347 ATTCGTGCTCTCGAACCTC 59 NA Drosophila melanogaster 61 CG31542 FBgn0051542 FBtr0078786,FBtr0302421 2 2 2 62 3R 1195903 1195921 GAGTCAGAACCCGAACTCC 59 1195947 1195965 ATGACGCACTTCTTCTGCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 2 2 2 120 3R 1062886 1062962 ATGATGACATGAGCAGCGT 59 1062784 1062802 CTGTACTGGCTTTGACCCT 59 NA Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 3 2 2 80 3R 776119 776202 TAACATCCATACAGTCACTGCT 59 776060 776079 TTTCTTTATACAGCTGGGCG 58 NA Drosophila melanogaster 61 Karybeta3 FBgn0087013 FBtr0078860 3 1 1 140 3R 476445 476527 TTCTACAAAGGGCTTCCAG 57 476631 476649 CTCGTCGATCAGATTCCTG 57 NA Drosophila melanogaster 61 CR34262 FBgn0085291 FBtr0112457 3 1 1 80 3L 21952869 21952946 GTGCCAGCAGATAACTACG 58 21952988 21953008 TAAGATCTGGAAACTGCAGGT 59 NA Nonspecific Drosophila melanogaster 61 Uhg7 FBgn0083121 FBtr0300232 1 1 1 80 3L 1667036 1667110 GCGCTCTAAATTGGCTGTC 59 1666802 1666820 AGGATCCAGATACGAGCCA 59 NA Drosophila melanogaster 61 nvd FBgn0259697 FBtr0113473 1 1 1 80 3L 24394278 24394358 ATGGAGAAAGTCTCATGTTCG 58 24394397 24394418 CCTTAGCTAAGATTGGATTCCG 58 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536,FBtr0113188 2 2 2 81 3L 22729862 22731361 CAAGCGAGTGTTAGCTCAG 58 22729799 22729817 CTTTGAGTGCACCGATGAG 58 NA Drosophila melanogaster 61 pzg FBgn0259785 FBtr0078336 1 1 1 136 3L 21280139 21280157 TCCACGTAAACTCCTGCAG 59 21280317 21280335 TATAGTCACACGAGGTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 1 5 5 110 3L 21192059 21192082 GATGGTAGACATATCTACAACCTG 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 Ac78C FBgn0024150 FBtr0301701 1 1 1 80 3L 21133336 21133418 TTCAAGAACCTTAACAGTCCC 57 21133276 21133296 GACTCTATGATCCTCCTTCGT 58 NA Drosophila melanogaster 61 CG18281 FBgn0037003 FBtr0078206 3 1 1 76 3L 20494084 20494106 GGGATTATTACTCCTGCTATTGC 59 20494140 20494160 TACTGCTTAACCAGTACATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5195 FBgn0036995 FBtr0078223 1 1 1 80 3L 20449831 20449849 TGAGGAGCATCAAGGAACG 59 20449714 20449789 AATCAATCGGATTCCCATCCA 59 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 2 3 3 80 3L 20426897 20426918 GGTGTTCATTAAATACCTGCCT 58 20426958 20427049 AGGACAGCAATAAGATCCCA 58 NA Drosophila melanogaster 61 Ide FBgn0001247 FBtr0273273 2 1 1 80 3L 20366708 20366785 AAAGATACTGTGCAATCCTGG 58 20366648 20366668 TGTTGGTATGAAGCTGTTTGG 59 NA Drosophila melanogaster 61 gig FBgn0005198 FBtr0074819 2 1 1 80 3L 20131104 20131125 TAATGCTAGATAGAAACGGAGC 57 20131166 20131245 CGACATGGAACGTAACCTG 58 NA Drosophila melanogaster 61 serp FBgn0260653 FBtr0074953 3 1 1 96 3L 19695587 19698916 CACCTGTGATATCGACAACG 58 19695510 19695528 CGATGTACCATCCTCCGAG 59 NA Drosophila melanogaster 61 CG12519 FBgn0036872 FBtr0074930 3 1 1 84 3L 19465651 19465724 ATCCGCCGTTGTTATTCTG 58 19465772 19465790 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ugt FBgn0014075 FBtr0075064 1 1 1 97 3L 18866271 18866473 CGAATATGATACCGAGTCGC 58 18866533 18866551 ATACCACCAGCCTAAGCAG 59 NA Drosophila melanogaster 61 MED19 FBgn0036761 FBtr0075160 1 1 1 95 3L 17838899 17838917 TGGAAAGGAGCTTCTTCCG 59 17837963 17837985 GTGACATATGTGGTACGATACTG 58 NA DesignNoJunction Drosophila melanogaster 61 rogdi FBgn0036697 FBtr0075283,FBtr0075282 2 2 2 84 3L 17045162 17045180 GTTCATACTCACCGTGTCG 58 17045228 17045832 AAAGCTAATGTCAGCCTGG 57 NA Drosophila melanogaster 61 CG32170 FBgn0052170 FBtr0075258 1 1 1 60 3L 16871929 16871947 ACCACAGAGTAGACCACAG 58 16871968 16871989 CTTAACAGGTGCATTGTAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13042 FBgn0036602 FBtr0075433 1 1 1 60 3L 16301427 16301509 AAGTTGGTGGTGTTCTTCG 58 16301385 16301403 ACTCCAAATAACCCGGACG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG5157 FBgn0036575 FBtr0075490 1 1 1 60 3L 16130056 16130077 GTGTACGATGTAACCAAGTTCC 59 16130017 16130036 ATTCGAGTAGTGCTTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 3 2 2 154 3L 16126324 16126397 GCAAAGGGCAAAGAGACTG 59 16126513 16126533 CAATTTGGTTCTGTGCATCCA 59 NA Drosophila melanogaster 61 CG12713 FBgn0036536 FBtr0075506 2 1 1 157 3L 15825878 15825964 TTCTCAAAGCCTACGAGGA 58 15826085 15826103 AAGAAGCTGTGAGATGTGC 58 NA Drosophila melanogaster 61 Eig71Ei FBgn0014849 FBtr0075574 2 1 1 87 3L 15653061 15653079 TTTAACGACTACTGTCGCC 57 15653129 15653209 GCACAGTAGATAAACAGGCT 57 NA Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299851 3 1 2 96 3L 15625062 15625080 CCTTACACTGCTCATCGTC 58 15607109 15625002 GTGATTGGCACGGTATGAG 58 NA Drosophila melanogaster 61 ran-like FBgn0036497 FBtr0075616 2 1 1 60 3L 15478021 15478042 TCGCAAGACAAACATTTACCTC 59 15477982 15478003 CTTCTCCACGTTATAGTTCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4914 FBgn0036436 FBtr0075712 1 1 1 85 3L 14670543 14670561 AATCGCAATAATTCGCCGG 59 14668523 14668541 ATCCTGGACTCGTCATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 1 2 2 60 3L 14045083 14045101 TGACATTCGTGATACGTCG 57 14045123 14045143 CGTGTGGGTATTAGAGATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17361 FBgn0036395 FBtr0075767 2 1 1 60 3L 13990385 13990403 AATTGGTGAAGATGTGCCG 58 13990426 13990445 TCGTAGATGTCTAGCAGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8745 FBgn0036381 FBtr0075801 1 1 1 98 3L 13855090 13855108 CTTCGTCAATTCCGGATCC 58 13854890 13855028 TGATAGGCATGGTCGAGAG 58 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075823 3 1 4 76 3L 13462163 13462247 CACATGGGAAAGGTCTTGC 59 13462105 13462123 AATCTTTCCAGCTGAGCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG10133 FBgn0036366 FBtr0075825 1 1 1 60 3L 13442725 13442744 GGAATTTACCCTACAGGCGT 59 13442684 13442704 ACGGTTCAATGTAGAACTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ste14 FBgn0036336 FBtr0075876 1 1 1 94 3L 13012152 13012299 CTCACTTGGTCCAGAATGAG 58 13012356 13012374 GAACCAGCCGACATAAGAC 58 NA Drosophila melanogaster 61 CG11267 FBgn0036334 FBtr0075875 1 1 1 137 3L 13009567 13009585 CAAAGTACTTGAGGGCACC 58 13009754 13009772 TCTAGGTTCACCTTGGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075902 3 1 2 165 3L 12957993 12958014 CTGTCGGTATCCATGATATCCA 59 12957714 12957867 GCAATACTTTGCCACTCGT 58 NA Drosophila melanogaster 61 CG10969 FBgn0036310 FBtr0075946 2 1 1 60 3L 12773800 12773818 GTGAAACCAGTGTTGGGAG 58 12773758 12773777 CCATCATAGACTGACCAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 3 2 2 98 3L 12763428 12763502 CATTACAGCAAACCCAGGA 57 12763348 12763366 CAGTAAGCGAGAGTTTGCT 57 NA Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 3 1 1 84 3L 12497750 12497834 AAGACTGCACAAGGAACTG 58 12497882 12497900 CTTGAAGATGTTCTCGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10646 FBgn0036292 FBtr0075972 1 1 1 129 3L 12496859 12496877 AACACCTCAGTACGGAGAG 58 12496697 12496768 CTCAAAGACCTTTGATTGCAC 58 NA Drosophila melanogaster 61 Pbprp1 FBgn0011279 FBtr0075955 1 1 1 80 3L 12389453 12389473 TACGATCATAAAGCAGGTGAG 57 12389512 12389598 GACTTGTCAATCACATCTACAG 57 NA Drosophila melanogaster 61 CG6140 FBgn0036162 FBtr0076177 2 1 1 71 3L 11458283 11458301 TAAACTTTCGCATTGGCGG 59 11458158 11458176 TCTTCAGTATGCCCATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7600 FBgn0064766 FBtr0076165 3 1 1 113 3L 11205853 11205929 ATATCACAGGCTATGGACCG 59 11206005 11206023 CAGAGTGCAGGATGTTCAC 58 NA Drosophila melanogaster 61 CG7600 FBgn0064766 FBtr0076165 1 1 1 112 3L 11205853 11205929 ATATCACAGGCTATGGACCG 59 11206004 11206022 AGAGTGCAGGATGTTCACC 59 NA Drosophila melanogaster 61 wls FBgn0036141 FBtr0076218 2 1 2 81 3L 11161285 11161306 TTTAGGAATATTGGCGACAAGC 59 11161003 11161249 GGTCTAAAGGAACTTCATAATGGAG 59 NA Drosophila melanogaster 61 wls FBgn0036141 FBtr0076218 1 1 2 80 3L 11161285 11161305 TTAGGAATATTGGCGACAAGC 58 11161003 11161249 GGTCTAAAGGAACTTCATAATGGAG 59 NA Drosophila melanogaster 61 APP-BP1 FBgn0261112 FBtr0076208 3 1 1 163 3L 11093024 11093042 GCCAGGAGTACCTTAAGCA 59 11093169 11093249 GTTGTCCTCAACCAGTGGT 59 NA Drosophila melanogaster 61 CG14145 FBgn0036118 FBtr0076202 2 1 1 60 3L 11055015 11055036 GAGAATCTGAATACTTCGACCA 57 11055057 11055075 TCATCGGAGCTAATTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34050 FBgn0054050 FBtr0100105 1 1 1 212 3L 10937714 10937732 CATGCATCACTCCAACGTC 59 10937908 10937983 CTTGACTTGCAGCTACCTG 58 NA DesignRelaxed Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076432,FBtr0076435,FBtr0076433 2 4 4 150 3L 9330627 9330645 CCATTACCTTTATGGGCGA 57 9330758 9330842 CTTCTGGTCACCTTAGTCTG 57 NA Drosophila melanogaster 61 CG4641 FBgn0035967 FBtr0076533 1 1 1 155 3L 9136282 9136303 CCGCTCTATAACATTTGGATCG 59 9136419 9136640 TCACTGAGATCGTCCTCCA 59 NA InUTR Drosophila melanogaster 61 CG5144 FBgn0035957 FBtr0076523 3 1 1 60 3L 9040806 9040825 ACTACACCCTCGTTCAACTC 59 9040848 9040866 CATGATTGCACATTCCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 2 2 2 82 3L 8966608 8966629 CTCGTATTTGGATGTTAAGCAG 57 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 3 2 2 80 3L 8343180 8343259 CTCCTTCATATGCCTGAGGAG 59 8343300 8343319 TTTGTAGAGATCACGGAGCC 59 NA Drosophila melanogaster 61 CG7979 FBgn0035848 FBtr0076690 1 1 1 80 3L 8175021 8175328 TATGCCAAACAGGAGAAAGTG 58 8175367 8175388 TCCATCGTTCATATGCATTCTC 58 NA Drosophila melanogaster 61 CdsA FBgn0010350 FBtr0076688 3 1 1 80 3L 8122641 8122724 TGATCACGACGTTACTGGT 58 8122765 8122786 AGCCATGAATTCGATAAACCTG 59 NA Drosophila melanogaster 61 Srp9 FBgn0035827 FBtr0076750 1 1 1 80 3L 7929701 7929784 ACGGACAACGTTAAGTGTG 58 7929826 7929846 CAAGTTGCTGGTGATCTTCTC 59 NA Drosophila melanogaster 61 Cyp316a1 FBgn0035790 FBtr0076790 2 1 1 80 3L 7486132 7486152 GAAACTATGCGTCTTTACCCA 58 7486192 7486287 GGGAAGTTCTGCATTGTATGG 59 NA Drosophila melanogaster 61 CG8560 FBgn0035781 FBtr0076868 2 1 1 80 3L 7396977 7396997 AAACTATTTGCTGTGGTGCTC 59 7396700 7396938 GATGTCGTAGATCTTGTAGCCA 59 NA Drosophila melanogaster 61 BBS1 FBgn0035741 FBtr0076912 1 1 1 80 3L 7120370 7120389 TTGGATAAGCCCAAGAAGAG 57 7120431 7120532 ACTTCCGTAGGTTGATTTGG 57 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 3 1 1 61 3L 6659884 6659968 CATAAGGAAACTGCTAGAACGA 58 6659844 6659865 GTGATACGTTCCCAAATTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32397 FBgn0052397 FBtr0076985 2 1 1 80 3L 6564287 6564720 GATAGCTACGCGGTACTACC 59 6564226 6564246 TGTCTCCTTTGATCCTACAGC 59 NA Drosophila melanogaster 61 CG32396 FBgn0052396 FBtr0076969 2 1 1 135 3L 6524011 6524081 GGAGATTCTTTCTGGCACG 58 6524180 6524198 CATAGAACCGTTTGCTGGC 59 NA Drosophila melanogaster 61 CG10289 FBgn0035688 FBtr0077019 3 1 1 81 3L 6165303 6165323 AGACTGTGATCACTGTGATGG 59 6165187 6165260 TCTAGTGTGGGTTTCGCAG 59 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 3 2 2 146 3L 6121631 6121649 TTGATGGCGTTTGTCTGTG 59 6119581 6121463 GATAATGCCGCGTTCATCTC 59 NA Drosophila melanogaster 61 Jon65Aii FBgn0035666 FBtr0077042 3 1 1 80 3L 6045697 6045715 CCTATGGAGCCAGTTACGT 58 6045759 6045839 TACCGGTATCGTAGTGGGT 59 NA Drosophila melanogaster 61 Jon65Aii FBgn0035666 FBtr0077042 1 1 1 80 3L 6045698 6045716 CTATGGAGCCAGTTACGTG 57 6045760 6045840 TTACCGGTATCGTAGTGGG 58 NA Drosophila melanogaster 61 CG13288 FBgn0035648 FBtr0113148 3 1 1 83 3L 5901738 5901756 GACTTTCTGCTGGGTAACC 58 5901798 5901927 GAATATCACAGTCACTACAGTCAC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 1 7 10 106 3L 5534355 5534442 GCTATAACGGTATTAACGATGG 57 5534270 5534288 AACAACGTGGACATATGGG 57 NA Drosophila melanogaster 61 CG4769 FBgn0035600 FBtr0077144 2 1 1 81 3L 5355023 5355041 GGTCAGTACTTCAACCCGT 59 5355086 5355218 CCTCGTACTCGATGACCTC 59 NA Drosophila melanogaster 61 CG4603 FBgn0035593 FBtr0077164 3 1 1 60 3L 5128247 5128265 AAGAACTTTGGACTGCGTG 58 5128289 5128307 TGTACAGCGGATCGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 Cpr64Ad FBgn0035513 FBtr0073223 2 1 1 179 3L 4215464 4215557 GGTTGTTGCAGTCCTTTCC 59 4215700 4215718 TTGTATCCCAAAGGAGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 dib FBgn0000449 FBtr0073205 1 1 1 80 3L 4062826 4062844 CAAGAATCTCGCAATGGTG 57 4062885 4063046 GGTAAGCAAACAGGTTAATTCC 58 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 2 3 3 82 3L 4023745 4023763 CCCAGGATGTCCATGTCTG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 CG10858 FBgn0035458 FBtr0073190 2 1 1 141 3L 3751225 3753056 TTCAATAGCGATTTCCTCTGTG 58 3748738 3748756 GACTTCATCTCGAATGCGC 59 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 1 2 2 88 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504795 3504897 CAATGGGTAGCGATGACAC 58 NA Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0300749,FBtr0073076 3 2 2 79 3L 3377173 3377191 TTGGATACCTGGAGGACAC 58 3377234 3377252 GCAACAGAGAATTCCCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12017 FBgn0035429 FBtr0073052 1 1 1 82 3L 3289122 3289145 GATTGGTCTGCTGATCAATATAGC 59 3289180 3290318 GTTCAACGTATACAACCTTAGATGG 60 NA Drosophila melanogaster 61 CG14964 FBgn0035410 FBtr0073110 3 1 1 98 3L 3176835 3176913 GCTTTGAGGTCTCCAACAC 58 3176755 3176774 ATCGATTCCAAGCTTTCACC 58 NA Drosophila melanogaster 61 CG32488 FBgn0052488 FBtr0073008 1 1 1 198 3L 3015473 3015491 TTTAGATGCCGCCTATCCC 59 3015229 3015311 ATCCGTCTGCAGTGTATCG 59 NA Drosophila melanogaster 61 FR FBgn0035385 FBtr0072980 2 1 1 104 3L 3002287 3008540 ATTCCCAAGCTTAAAGTGTCG 59 3008603 3008624 GGTCGGATACTTATTGTTGCAC 59 NA InUTR Drosophila melanogaster 61 CG9977 FBgn0035371 FBtr0073016 1 1 1 114 3L 2770488 2771282 ATCTACTCCACGCAGAACG 59 2770392 2770410 TAACGCAGCGATCTATGCA 59 NA Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 2 2 2 94 3L 2600875 2600893 AACTCGCAAGAAGGGACTC 59 2600949 2601030 CGATCTTGACCTTCTGTAGGT 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 2 2 2 80 3L 1769509 1769596 TGCCGAGCTTATGAAATGC 59 1769447 1769465 GGCTCAAGGTACTCGAAGG 59 NA Drosophila melanogaster 61 CG13932 FBgn0035259 FBtr0072801 3 1 1 78 3L 1710141 1710159 CACAGTCACCAGTCAAAGC 59 1710081 1710100 GAGTCTGTAGTCTGGAGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13932 FBgn0035259 FBtr0072801 1 1 1 76 3L 1710141 1710159 CACAGTCACCAGTCAAAGC 59 1710083 1710101 GTCTGTAGTCTGGAGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12003 FBgn0035234 FBtr0072744 2 1 1 96 3L 1565543 1565564 GATTAAAGCGATGAGAAGATCG 58 1566225 1566243 GATTATCGTGGCTCCATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 cue FBgn0011204 FBtr0072706 3 1 1 91 3L 1504451 1504470 AACTCCACGGAGATATGCTC 59 1504312 1504397 TCCTCACAGATGCTGTGAC 59 NA Drosophila melanogaster 61 Sac1 FBgn0035195 FBtr0072652 3 1 1 84 3L 1248181 1248268 TACAGGAATCTTCGAAGTGGG 59 1248313 1248332 GTTCATGTCATCGTACACGG 59 NA InUTR Drosophila melanogaster 61 Rev1 FBgn0035150 FBtr0072557 3 1 1 88 3L 656216 656296 TTGGCTTACGAGCAGATCC 59 656347 656366 AGAAATTGTTCGCACTCGAC 59 NA Drosophila melanogaster 61 CG34267 FBgn0085296 FBtr0112462 3 1 1 80 3L 500409 500430 GCATCCAAGTGACAATATCTCC 59 500287 500368 GATCACAGCGATAATGCGG 59 NA InUTR Drosophila melanogaster 61 klar FBgn0001316 FBtr0072565,FBtr0112807,FBtr0110818 3 3 4 80 3L 436272 436292 CAGGAGTTCCATAAGCATCTG 58 436150 436230 CGTGTTGATTCTGGCATCC 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0072543,FBtr0301817 3 6 6 80 3L 354437 354510 ATATCACCATATGACTGCACC 57 354552 354570 CATGTTTACGTAGTTGGCG 57 NA Drosophila melanogaster 61 snoRNA:Or-CD1 FBgn0086027 FBtr0114303 2 1 1 66 2R 18084853 18084871 GACGATTGGGTTCGATCTC 58 18084805 18084826 GTCGTAACATATTGGTTGGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30082 FBgn0050082 FBtr0087321 3 1 1 81 2R 11573197 11573274 CCATTTGTTAACGGTTCGC 58 11573134 11573154 ATACGTCGGAATACAGAACTC 57 NA Drosophila melanogaster 61 CG30428 FBgn0050428 FBtr0072451 1 1 1 80 2R 21141277 21141354 GGAAACGGGTTTGGAAAGAC 59 21141393 21141415 CAGTAGCCTTAGAGTTCTCTAGC 59 NA Drosophila melanogaster 61 CG12851 FBgn0035086 FBtr0300763 2 1 1 80 2R 20840455 20840475 TAAAGCGCAAGGTATACAAGG 58 20840515 20840587 GTCCGTTTGAATCCAATTCGA 59 NA Drosophila melanogaster 61 pain FBgn0060296 FBtr0072417 2 1 1 84 2R 20811993 20812011 GAGAAGGCACTCTCAACAC 58 20811867 20811948 TCTTGTTGATGTAGTTCACCTG 58 NA Drosophila melanogaster 61 CG9083 FBgn0035077 FBtr0114563 3 1 1 82 2R 20785872 20785959 CCCGTTTCATAATCAGTGCG 59 20786004 20786022 GATGTGGACATGCTCTCGT 59 NA Drosophila melanogaster 61 CG16896 FBgn0035073 FBtr0072423 2 1 1 113 2R 20761967 20761986 GATTCTGATGTGTCGCTCAC 59 20761814 20761891 TAGGACGTTCCCAGATTCG 58 NA Drosophila melanogaster 61 CG42361 FBgn0259707 FBtr0299960 1 1 1 130 2R 20495488 20495506 AATCCCAACATTGTGCTGG 58 20495600 20495676 TTTGCATGGTCATCCTCGA 59 NA Drosophila melanogaster 61 CG4707 FBgn0035036 FBtr0072338 3 1 1 81 2R 20493023 20493043 TGGAGTATCATGACGTTTCCA 59 20492899 20492984 GTAGGAATCTTCTTGTTGCACTC 59 NA Drosophila melanogaster 61 CG13589 FBgn0035011 FBtr0072354 1 1 1 206 2R 20380121 20380140 CACATTCATAGAACCAGCGA 58 20379873 20379952 ATCTGCAAGCCCTCATAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13579 FBgn0035010 FBtr0072298 3 1 1 108 2R 20371893 20371911 CTACTACCAGCACTCCAGC 59 20374127 20374217 GAAGTAGTAACCTTTGGGCAG 58 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273,FBtr0301274 2 2 2 68 2R 20046538 20046556 ATTCGCAATGATTGCAGCA 59 20046435 20046506 TGGGTGGTACAATTTGGAG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 mr FBgn0002791 FBtr0072156 2 1 1 83 2R 19860959 19861052 CTGGAAACTTGGCTATCGG 58 19861096 19861117 ATCGCTTATGCTATCCTTAGAC 57 NA Drosophila melanogaster 61 CG3803 FBgn0034938 FBtr0072208 1 1 1 80 2R 19841389 19841413 CCAATCTCATAAAGCTAGTAGTACC 58 19841252 19841353 TCACTGGGATTTCCTTTATCG 57 NA Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 1 2 2 61 2R 19776670 19776690 CCAGAACGATAAGGAGTTTGC 59 19776629 19776647 GATTGGAACAGCCGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gbb FBgn0024234 FBtr0072127 2 1 1 67 2R 19739427 19739445 GATCATGCACAGAGTGCTG 59 19739476 19739494 CCAGGAACTCGAGGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL43 FBgn0034893 FBtr0072084 3 1 1 84 2R 19585815 19585834 CTATGTTTGTCAGCTCCAGC 59 19585881 19585961 ATTCTCAATGAAGTCGCGC 59 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301262,FBtr0301263 2 2 2 60 2R 19487330 19487410 TCCAACAAGAACATATCCAAGC 59 19487291 19487309 AATGTATGTTCTCCTCCGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Prosbeta5R FBgn0034842 FBtr0072045 2 1 1 98 2R 19197119 19197138 GAATCCCTACGAACTGATGG 57 19196984 19197002 CCGTGATCGAAATCCATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3162 FBgn0034834 FBtr0072052 3 1 1 60 2R 19098434 19098453 CCTTGAAGATAAGACGGCCA 59 19098393 19098413 ATTGCAGAGACTGAAATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3085 FBgn0034816 FBtr0071963 3 1 1 60 2R 18963472 18963548 AGAAATCCCAAGAACTCCTG 57 18963568 18963589 GCTTTATGTTCTTCACGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3800 FBgn0034802 FBtr0071994 3 1 1 71 2R 18823653 18823671 ATGTGTCGTGCTACAAGTG 58 18823600 18823618 AGCAAGTCTTCGAGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inaD FBgn0001263 FBtr0071909 1 1 1 80 2R 18744204 18744283 AACTACGATGATGCTACTGGA 58 18744144 18744162 CTCCTCGCTCTTGAGAGTC 59 NA Drosophila melanogaster 61 CG42565 FBgn0260767 FBtr0301269 1 1 1 80 2R 18548358 18548583 CCTATTCCTATGCTGGCCC 59 18548627 18548645 CAGTTGGGACAGTACTGGG 59 NA Drosophila melanogaster 61 CG3732 FBgn0034750 FBtr0071936 2 1 1 286 2R 18527350 18527445 CAGATTACGACTGTCGCCA 59 18527082 18527100 CATATTGCAGGTTTGGCGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 1 2 2 85 2R 18079225 18079243 CTTCCCAGGTCCTTACTGC 59 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 CG11275 FBgn0034706 FBtr0071769 3 1 1 166 2R 18067441 18067459 TTGTTACGATTCTCGCGTG 58 18068873 18068891 GTGGAACACGCAATCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30285 FBgn0050285 FBtr0071678 2 1 1 128 2R 17575974 17575992 TTTCATAGTGAGCACGCTG 58 17575796 17575814 TAGGGTCCTTCGTTCTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 NC2alpha FBgn0034650 FBtr0071666 3 1 2 99 2R 17557771 17557789 AATACAACGCACGCTTTCC 59 17558058 17558077 CGTGAGATGATAACAGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33225 FBgn0053225 FBtr0300405 1 1 1 92 2R 17478422 17478440 TTATCCATGGCCAATTCGG 58 17478495 17478570 TGACGTAGTCTGAGATCGAC 58 NA Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 2 2 2 80 2R 17375862 17382650 GAAATTCGACTCGAGCTTCG 59 17375801 17375821 TGATCCCAACCCTTAATCACC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 1 6 6 80 2R 17299851 17299874 CCCATGATGAAATCTATATCGACG 59 17286797 17299818 CTTTCTCTAGATCTTCGTGTATACC 58 NA Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112644 1 1 2 80 2R 16981404 16987726 TTACACGACCATAGGTTACGG 59 16987768 16987786 CCGATGATGGCATAGACGA 59 NA Drosophila melanogaster 61 Cht9 FBgn0034582 FBtr0071542 1 1 1 119 2R 16956136 16956216 GAGATTAAGGAGGCGTTCG 58 16956035 16956054 GATAAAGTCGACCTGCTGAG 58 NA Drosophila melanogaster 61 Cht12 FBgn0050293 FBtr0071544 1 1 1 80 2R 16952080 16952100 ATCTGGAATAGGTGTGGATGG 59 16951969 16952038 CTCAGCTTGTCCTTCTCCA 59 NA Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 3 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific Drosophila melanogaster 61 Obp57b FBgn0043534 FBtr0086293 2 1 1 60 2R 16392139 16392160 TAAGGCATCCAAATCCATTACC 58 16392180 16392199 GTACGCACAAAGTTCTTCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9090 FBgn0034497 FBtr0086303 2 1 1 91 2R 16167937 16168500 ACTTTGAAGCACTTCTCTAAGG 58 16167867 16167885 GTTGACGCTAGTGAATGGC 59 NA InUTR Drosophila melanogaster 61 CG11788 FBgn0034495 FBtr0086277 1 1 1 94 2R 16163348 16163366 TGCCCACCAATATAAGCGA 59 16163422 16163500 GGTAAAGCACTCTATGTACGG 58 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 1 3 3 80 2R 15314635 15314715 GGCAGTATGGTAAATGGGT 57 15314759 15314777 TGGAGTGCATGTACATCAG 57 NA Drosophila melanogaster 61 Rgk1 FBgn0034434 FBtr0301531 3 1 1 81 2R 15202804 15202824 GGCCGTTTCAGTATTACTCAG 58 15202250 15202761 CTCATCCGGAGTCATTTCG 58 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 2 2 4 82 2R 15196011 15196086 GCCAATGAGGTGATCTTCG 58 15195947 15195966 AGACCCTTCAATAGACCCTG 58 NA Drosophila melanogaster 61 rib FBgn0003254 FBtr0086512 3 1 1 61 2R 15163648 15165375 TTATTTCGTGGCAACCAGG 58 15165400 15165418 GATGCTTCCTGACCTTGAG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Ir56a FBgn0050125 FBtr0086595 2 1 1 93 2R 14983085 14983105 CGTATTTGGAAAGTCTTCGCA 59 14982916 14983031 TGTTCCGATGAGTTGTACCA 59 NA Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 3 2 2 83 2R 14996379 14996397 AGGATCCAGACTATCTGCA 57 14996444 14996531 AACAGGTGGCAAATACCTG 58 NA Drosophila melanogaster 61 CG16836 FBgn0040735 FBtr0086666 3 1 1 81 2R 14276655 14276739 GGCAGCTGTTAATGCTACG 59 14276784 14276802 TCCCGGATCATTATCAGGC 59 NA Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 1 1 1 181 2R 14049358 14049457 CCTCATGAAGTATATTGAAGAGGG 58 14049597 14049615 ACAGGACTTTACGCTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18186 FBgn0034255 FBtr0086896 2 1 1 60 2R 13521596 13521616 CCAGAAATCCATCGATTTGGG 59 13521556 13521579 GTATTCCGAAGATTTCTCCTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 1 1 1 151 2R 13479663 13479681 AAACAGAGAAGCCCATCAG 57 13479466 13479548 GAGAGCTTGAGCAACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 3 2 2 81 2R 13378859 13378936 CCGGATGCTATATCCTTGG 57 13378981 13378999 GAAAGGTGACCTCGTTGAG 58 NA Drosophila melanogaster 61 CG17287 FBgn0034202 FBtr0087000 3 1 1 60 2R 13044987 13045008 GTCAGCTTGTTAAACGTATCTC 57 13044948 13044966 AGTATGTGGCATAAGCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8950 FBgn0034186 FBtr0087013 2 1 1 139 2R 12948299 12948373 AGGATCTTCAGGATCCTGC 58 12948178 12948196 AAAGCAGATCTTCTCAGCG 58 NA Drosophila melanogaster 61 Cbp53E FBgn0004580 FBtr0087056 2 1 1 81 2R 12873645 12873663 GATTTGCTCAAAGAGGCCA 58 12873705 12874095 ATACTTGGAGCATAGTATCGGT 58 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0112819,FBtr0087048 1 3 3 80 2R 12829652 12829743 CTCCAGAGATAATACTGTATCAGC 58 12829776 12829800 CTAACATCTCATAAAGCAGTACTCC 59 NA Drosophila melanogaster 61 CG5550 FBgn0034160 FBtr0087033 1 1 1 80 2R 12704658 12704678 CGACAATGCCACTATCAACTG 59 12704718 12704801 CCATTCAGATTGCTGCTAAGG 59 NA Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087024 3 1 2 236 2R 12669535 12669682 GGAAGGAAGCAAATTGTGGAG 59 12669879 12669898 GGAATATCCACTAGGTCCCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG5267 FBgn0034154 FBtr0087021 3 1 1 60 2R 12642917 12642937 ATAGGTGAAGAAATAGCCCTC 57 12642957 12642977 GCTGCTTGATATACTTCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 1 1 1 73 2R 12386523 12386707 CACGAGGAGTACAAGGACC 59 12386468 12386487 TGACGGTAGTATTCCCAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CheB53a FBgn0261292 FBtr0091520 2 1 1 81 2R 12354635 12354654 GTACACAGATTGGTCCTCCC 59 12354698 12354772 AAGGAATAGTGTACCGGGC 59 NA Drosophila melanogaster 61 CG30093 FBgn0050093 FBtr0087199 1 1 1 65 2R 11831837 11831855 GTTTCACAATGCCGAGGTG 59 11831884 11831902 TAATCCTCCTCAGCCACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8299 FBgn0034052 FBtr0087291 3 1 1 60 2R 11828900 11828919 ATAAGCACCCACATTGTTGG 58 11828859 11828877 ACACCTGGTACGGAAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30091 FBgn0050091 FBtr0087277 3 1 1 81 2R 11568343 11568421 ACTCAGCTCACAGTTACCT 58 11568465 11568484 CCACGTTGTATATCTCGTGG 58 NA Drosophila melanogaster 61 CG30466 FBgn0050466 FBtr0087339 2 1 1 82 2R 11460251 11460327 ATGTCTAATGAGGATCCCATCC 59 11460370 11460388 TTTGGATGCTTCATGTGCA 58 NA Drosophila melanogaster 61 Vha36 FBgn0022097 FBtr0087335 3 1 1 60 2R 11429169 11429188 GATTCCGTTTGATTCTGGGC 59 11429209 11429229 TTCATAACATCACCCATCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a21 FBgn0033981 FBtr0087456 2 1 1 259 2R 10773507 10773525 GATGGTATCACAATCCGGG 57 10773213 10773285 GAAGGGTTTCCGATACAACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10209 FBgn0033971 FBtr0087462 2 1 1 83 2R 10735471 10735717 AAAGCTCACCATGGATCGA 59 10735406 10735424 TTGCCCTCCATGTACTTGG 59 NA InUTR Drosophila melanogaster 61 CG10202 FBgn0033969 FBtr0087464 2 1 1 238 2R 10706417 10706507 AACCAAATCCGGAAGAGGG 59 10706197 10706216 TATGCAATTGGTCACTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Dro FBgn0010388 FBtr0087436 1 1 1 85 2R 10633639 10633657 GATCACCTGACTCAAGCTG 58 10633706 10633724 TGATCGGATGACTTCTCCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Cpr51A FBgn0033942 FBtr0087514 3 1 1 111 2R 10402609 10402627 AAATTCGTGTTGATCGCCA 58 10400514 10400538 CATTCTGATATTTCTCGTACTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 1 2 2 80 2R 10057017 10057084 CCTTCTACATGATAAAGGCCC 58 10057126 10057144 TCGAAGTATGCTTGTGCTG 58 NA Drosophila melanogaster 61 CG42287 FBgn0259183 FBtr0299667 3 1 1 88 2R 9978088 9978165 TATGCTGCTTCGAAGAGCA 59 9978214 9978235 ACGGCCATTAGGAAATATAGGG 59 NA Drosophila melanogaster 61 CG30485 FBgn0050485 FBtr0087640 2 1 1 60 2R 9738593 9738614 TCACCCTATTCTTATGATCCGA 58 9738632 9738653 GGCTATTTCTCTGATGGTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr50Ca FBgn0033867 FBtr0087629 1 1 1 81 2R 9658511 9661706 CCACCTTAATGCTACTGATAATGAC 59 9661744 9661763 TCTAGGGATGGTAAACGCTG 59 NA Drosophila melanogaster 61 CG6280 FBgn0033866 FBtr0087628 1 1 1 107 2R 9643065 9643139 GGCAAGGAGCTTAATAAGCA 58 9643209 9643227 GAGTTCCCTCTCCAGATCC 58 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087957 2 1 4 82 2R 8229277 8232034 GCTTAGCGGAGCAATAACAC 59 8229214 8229235 AGCTACTAGGACTCAGAATTGG 59 NA InUTR Drosophila melanogaster 61 CG34021 FBgn0054021 FBtr0100076 2 1 1 101 2R 8224700 8224721 CAAAGCCATCGAATATCTACCA 58 8224851 8224870 CTTCCAACCACTTAAGTTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 1 2 2 74 2R 8142448 8142468 TCTATCTGATGAAGGTCGAGG 58 8142503 8142578 CAATTTCGTTCTGAATGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13177 FBgn0040759 FBtr0112772 1 1 1 81 2R 8051419 8051501 CTATAGAGGACAAGAAACCCG 57 8051544 8051562 GATGGAGCTGCATAGTAGC 57 NA Drosophila melanogaster 61 CG13186 FBgn0033680 FBtr0087981 1 1 1 60 2R 7968963 7968981 AACATTCTTCACGCAACGG 59 7969005 7969023 TCCGTTTCGATTCTTCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pds5 FBgn0260012 FBtr0087974 2 1 1 80 2R 7917039 7917058 TTGTTGTGTTCAGTGCTACC 58 7917101 7917182 GAGAGTGGTTGCCTTTAGC 58 NA Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 3 2 2 179 2R 7263254 7263272 ACCCGATGTGATTACCCTG 59 7263415 7263755 GGATAGCTGTCCGATTTGC 58 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299854 3 1 4 85 2R 7182286 7182377 TGGTCTCCATATTCGCTCTC 59 7182220 7182238 GCTCTTCAGTTTCTCCTGC 58 NA Nonspecific Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088200 3 1 2 64 2R 6797481 6797585 GATAAACATCAATCTGGGACTAACC 59 6797607 6797625 TCATTTCCTCGGTGATCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 1 2 2 110 2R 6628679 6628756 GTTTGGATGATGACTTCCTGC 59 6628589 6628607 AGATCCCAATCACTTGGGC 59 NA Drosophila melanogaster 61 CG12309 FBgn0033542 FBtr0088215 1 1 1 60 2R 6613724 6613742 ATTGGTTCAGAAGCCTGGA 59 6613761 6613784 CATCAAGTAGGATATGGGAAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 StIP FBgn0033540 FBtr0088212 1 1 1 80 2R 6533467 6533537 GGATCCAAAGTTTCAAGGCA 58 6533579 6533598 CACCTCACAGTGTTTACTCG 58 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 1 3 3 91 2R 6527407 6527426 CAATCATACAAGTTGTGCGT 57 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088354,FBtr0088355 2 2 3 106 2R 6244180 6244198 GATGCTTTGCGACAGACTC 59 6244092 6244111 TATCTTTGTCGCCTCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18011 FBgn0033491 FBtr0088332 3 1 1 81 2R 6030633 6030706 CGAGCATGAGGATGTTATGG 58 6030748 6030768 TTGAGCTACCAATCTAGACGA 58 NA Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088411,FBtr0088410 3 2 2 61 2R 5984643 5984766 GATTGACGTCATTGCTTGAG 57 5984790 5984808 TACTTAAGTTCGCAGCAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088486 1 1 4 92 2R 5717356 5720993 ATTCCAGCTTAGCGAACGA 59 5717282 5717300 GTTGTTGATTGTCTCGGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0088491,FBtr0289980 3 2 2 84 2R 5711210 5711228 GTCAGCTAGACGAACTGGT 59 5711088 5711164 TTGAGGCGATTCATCTTTAGC 58 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0088475 3 1 2 214 2R 5701197 5702739 TGGCTAAGGAATGTATCACC 57 5703108 5703126 TTGATCCTGCGCAAATAGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 2 2 2 129 2R 5010059 5010134 AGGAATTTGTCAAGCTAAACCC 59 5010224 5010242 TAGAGTTGGTCATTCCCGG 58 NA Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 3 2 2 113 2R 4996509 4996591 AGCTGGTGGTGATTCAGAC 59 4996414 4996432 TGTAACGACCGTCATACCC 59 NA DesignNoJunction Drosophila melanogaster 61 cola FBgn0050363 FBtr0088770 1 1 1 60 2R 4252157 4252177 CCATCTGATACCACGATTCTG 58 4252117 4252135 TTCACATAAGCTCCCTCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30375 FBgn0050375 FBtr0088799 2 1 1 90 2R 4153754 4153829 TTAGACAGGCGGAGAACAG 59 4153682 4153700 AGAGTGTTCGACTTGGAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2158 FBgn0033264 FBtr0088783 1 1 1 127 2R 4012045 4012125 GTTTAAACAGGTTGTGGAGGA 58 4012214 4012232 TTTCGGAGTCCTTGACAGG 59 NA Drosophila melanogaster 61 CG2906 FBgn0033240 FBtr0113052 2 1 1 80 2R 3845209 3845283 GACGTTTCACCAATATTTCCAG 58 3845323 3845342 TGCTGGTTACTTAGAGTTCG 57 NA Drosophila melanogaster 61 CG18853 FBgn0042173 FBtr0089426 3 1 1 298 2R 3717028 3717108 CCAAGGTCAGAGCAATTATACC 59 3717367 3717385 AGTGCTCGTTGTAGAAGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG1550 FBgn0033225 FBtr0088899 2 1 1 60 2R 3698328 3698347 CTTACTACCAAACGAGAGCA 57 3698287 3698306 TTCCAGGGCTTGATAATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088934 2 1 3 87 2R 3629420 3629525 GCTGTAGACTATTTGCGGG 58 3629351 3629369 GTCGATCTGGTAGACGTCC 59 NA InUTR Drosophila melanogaster 61 cos FBgn0000352 FBtr0089015 1 1 1 131 2R 3273160 3273178 TCCAATTCCTCTGCTGGAC 59 3272991 3273067 CTTGGAGTCTATCAGCTTGGA 59 NA Drosophila melanogaster 61 CG12828 FBgn0033145 FBtr0112770 3 1 1 86 2R 3036979 3036997 TCAACGGTTGCTACTTGGA 59 3036855 3036932 CTAGGAACAAGTGTTTGTGGTG 59 NA Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 2 2 2 61 2R 2886861 2886879 GTGGGATGAGAACAATGCC 58 2886904 2886994 AAGAGAAGGCCAACTGGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30156 FBgn0050156 FBtr0086184 3 1 1 80 2R 2869297 2869318 ACTGGAAGTAGAAATCGAGGAG 59 2869181 2869257 AGATTATCCCTCCAACTCCG 58 NA Drosophila melanogaster 61 ppk25 FBgn0053349 FBtr0086169 3 1 1 96 2R 2838733 2838751 GAACCCATGAAACAGTGCG 59 2838805 2838888 CATCGTGAAGGTACATAAATATGGG 59 NA Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 2 2 2 77 2R 2811097 2811115 GAAAGTCATCGTTACCGCC 59 2811156 2811394 TAGATGCGCTCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 2 2 2 80 2R 2589416 2589901 GGAGGAAGATACCTGGTATGAC 59 2589357 2589378 AACTTCATGTCCAGAAAGAGTG 58 NA Drosophila melanogaster 61 CG30440 FBgn0050440 FBtr0086076 1 1 1 80 2R 1381447 1381465 AAACGTACAAAGCCTGCAC 59 1379608 1381403 GTATCCTCAGTCCTTGCCA 58 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 3 2 3 119 2R 1182465 1182484 TGATGAGTCTTACACCAGCC 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467,FBtr0091528 1 2 2 80 2R 1091741 1091761 GCATTGGTAAATTCATCTGGC 58 1091627 1091701 TTGGATGTTGGATATGTCGTC 58 NA Drosophila melanogaster 61 CG14464 FBgn0033000 FBtr0299923 2 1 1 109 2R 716987 717058 GTCTGGACATATGCGACTG 58 717131 717149 AAACTTTCGATTCGAGCGA 57 NA Drosophila melanogaster 61 CR31700 FBgn0051700 FBtr0301969 2 1 1 60 2L 22066740 22066758 CCTCGCCTAACAGTGAGAG 59 22066782 22066800 CTTTCAACGTTCGTTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His-Psi:CR33811 FBgn0053811 FBtr0091815 1 1 1 60 2L 21439012 21439033 TAGAATTATTCCGCGTCATCTG 58 21439053 21439072 CAGCTTGTTTAACTCCTCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a16Psi FBgn0031726 FBtr0100853 2 1 1 124 2L 5622706 5622727 GCGTATGGAGATAAACGATTCG 59 5622029 5622621 TACTTGCGCAGAGTTTCCA 59 NA Drosophila melanogaster 61 tRNA:CR31944 FBgn0051944 FBtr0077819 1 1 1 60 2L 2009539 2009560 GTTCCATGGTGTAATGGTTAGC 59 2009580 2009599 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 3 2 3 97 2L 20648001 20648197 GGTTTCCACACTTATAATGCAG 57 20648425 20648444 AGAGAAATTCGGGTTTCAGC 58 NA Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 2 2 2 80 2L 16840563 16841350 TAGTAACCTAAGCCAGATGACG 59 16841391 16841409 CCCATCAAAGTGCTCATCC 58 NA Drosophila melanogaster 61 CG15219 FBgn0040519 FBtr0085944 3 1 1 105 2L 22105193 22105212 TTAATGGTGCATCTGCATCG 59 22105059 22105125 ATTGGAGAGTAAAGCCCGT 58 NA Drosophila melanogaster 61 CG41434 FBgn0084001 FBtr0111262 1 1 1 60 2L 22038623 22038641 AGGGCTAATTTGACGAAGG 57 22038663 22038683 CCGTGGAAACCGTAAATAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33865 FBgn0053865 FBtr0091869 1 1 1 60 2L 21538506 21538528 CTAGAATTATTCCGCGTCATCTG 59 21538547 21538566 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508,FBtr0081511,FBtr0081509,FBtr0081510 1 4 4 91 2L 21297475 21297493 AGAACCTTCGACAGAAGCC 59 21297545 21297620 CGTGAAGATTGCAGTAAATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)k14505 FBgn0021856 FBtr0081482 3 1 1 114 2L 21261705 21261780 CTCTTCCAGTACGATGACG 57 21261858 21261876 TGTTCATGGTCTTCTGCAG 57 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 1 5 5 88 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184212 21184288 CGATGAACCAACTTTAACTCAG 57 NA Drosophila melanogaster 61 E2f2 FBgn0024371 FBtr0081501 3 1 1 80 2L 21154977 21155118 AAGCGTAATCATTACGAGCTG 59 21154917 21154935 CTTTCCTTGGTTCGTCACC 58 NA Drosophila melanogaster 61 CG9259 FBgn0032913 FBtr0081464 1 1 1 60 2L 21090658 21090678 TATTCTACCACCTCACTGCAC 59 21090699 21090718 AAAGTCGTTAAAGCCATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0301291 1 1 2 82 2L 20820775 20820795 GAGGATCCAGACATCTACACG 59 20820558 20820731 CTCATCCTAGCGTCGAAGG 59 NA Drosophila melanogaster 61 Kua FBgn0032850 FBtr0081336 1 1 1 80 2L 20102059 20102078 GAGATACAGCAACACTTCGG 58 20102117 20102203 CTTGTGTATCTGATTGGTCATGG 59 NA Drosophila melanogaster 61 RanGap FBgn0003346 FBtr0081234 1 1 1 80 2L 19445961 19445983 GAACGACAATACTCTAAAGTCCG 59 19446023 19446111 CTCATTTCACGCAGCAGTG 59 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 3 2 2 90 2L 19418408 19418489 GGAAACCCGTACAACTTGAC 59 19418540 19418560 ACCAATTGACCTTAGTCTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081229 2 2 4 288 2L 19183451 19183519 GGCCAAATTCCACTTAGCT 58 19183128 19183148 GTATCTACGAGTGTTTCAGGT 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Catsup FBgn0002022 FBtr0081143 3 1 1 108 2L 19042316 19042390 CGGATTTGGATATGAGCACC 58 19042461 19042479 GCCTCACTGTTGTCTAGGG 59 NA Drosophila melanogaster 61 Catsup FBgn0002022 FBtr0081143 2 1 1 83 2L 19042317 19042391 GGATTTGGATATGAGCACCA 58 19042437 19042455 ATATACAGCAGCACGAAGG 57 NA Drosophila melanogaster 61 ssp3 FBgn0032723 FBtr0081193 1 1 1 80 2L 18940623 18940701 AACCGTAGTGGAATCCTGC 59 18940561 18940579 ATGGTCTTGGAGAACTCGC 59 NA Drosophila melanogaster 61 CG17325 FBgn0040993 FBtr0081102,FBtr0299685 2 2 2 60 2L 18813629 18813650 GCCTTCAAATACAATCAGATGG 57 18813668 18813689 AGAAGTGCAGGTTATTGAACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0081085,FBtr0081086,FBtr0300676 3 4 4 96 2L 18476906 18476989 TCAGTCCCAAGAGATTAATGAC 57 18476831 18476849 CTTGATTTGTTCGTGCAGG 57 NA Drosophila melanogaster 61 CG5681 FBgn0032658 FBtr0081024 1 1 1 106 2L 17986412 17986433 GCTCAGTCAAGATTTATAGCCT 58 17986553 17986571 GTGCTAGCACTTGACTCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31805 FBgn0051805 FBtr0273383 2 1 1 88 2L 16900290 16900362 TTTCCTGTGGAATCCCAGG 59 16900220 16900239 TTTGTGAGGTCGGGATAGTC 59 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 3 2 2 134 2L 16800511 16800610 AGTTCTATGACCGTCTTTGGA 58 16800706 16800724 TTACTCCAGGCACATTCGG 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 3 4 4 89 2L 16696754 16697510 TATGTTTAGGTGCAAGGGC 57 16697563 16697581 TATGCCTTCTGTAGCACCT 58 NA Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 3 2 2 95 2L 16310058 16310079 GATACTTTGTACCGGAACATGC 59 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 CG31821 FBgn0051821 FBtr0080809 1 1 1 80 2L 15901343 15901415 AATTAATACAATCCCGCGCC 59 15901282 15901301 GGCACTAAAGTGTCCAACTG 59 NA Drosophila melanogaster 61 CG18518 FBgn0028900 FBtr0080814 2 1 1 60 2L 15835427 15835448 TGGATTCTGCATTGTCATTGTC 59 15835388 15835409 CGAATATCCTCGAATGTTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42448 FBgn0259922 FBtr0300217 2 1 1 80 2L 15547601 15547676 CTCCAGGACAATAGACATTCC 58 15547715 15547736 TACTGTTTGAACTAGAGTGCTG 58 NA Drosophila melanogaster 61 wor FBgn0001983 FBtr0080740 2 1 1 91 2L 15425407 15425425 TAAACTCAAGTACAGCCGC 57 15425272 15425355 GTCCTTCATCATGACTTAGGTG 58 NA Drosophila melanogaster 61 yellow-c FBgn0041713 FBtr0080699 3 1 1 80 2L 15036922 15036940 AGATACTTTACTGCGCCGT 59 15036983 15037061 GCATCCACAACAATATTCGC 58 NA Nonspecific Drosophila melanogaster 61 Mst35Ba FBgn0013300 FBtr0080682 3 1 1 90 2L 14879243 14879262 TAGAAAGGATCGATACCGCC 59 14879123 14879142 CCTATCTCAGTATTGCTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HDC02577 FBgn0250834 FBtr0080673 2 1 1 114 2L 14802900 14802920 CTCACAAACGATCCCAAAGAG 59 14803046 14803065 AGATACTTCCTGTCGTCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080589 1 1 2 83 2L 13980372 13980390 CGTAAGCACCAGAACTCAG 58 13980436 13980516 AAAGCCCAAGTAAGTCTCAG 57 NA Drosophila melanogaster 61 Ance-2 FBgn0032535 FBtr0080554 1 1 1 80 2L 13911266 13911341 CAGTATGCCAGCAACTTCC 59 13911382 13911403 TTCAAACTGACCAGTTATGGTG 59 NA Drosophila melanogaster 61 CG8997 FBgn0028920 FBtr0080563 2 1 1 124 2L 13845286 13845304 AGGTACTACGATCAGTCGG 58 13845116 13845198 ATCGACTGGGTTTCAATGG 57 NA InUTR Drosophila melanogaster 61 RpII33 FBgn0026373 FBtr0080544 2 1 1 60 2L 13833680 13833698 GTGACTGTATCTGCCTGGA 58 13833721 13833740 TTTACGTCCAGGGTGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sos FBgn0001965 FBtr0080541 3 1 1 80 2L 13815707 13815787 TTTATTCGCGAGGATTCGC 59 13815831 13815849 CCCGTCGAAGAGGAATACC 60 NA Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514 2 1 2 193 2L 13547154 13547762 CCTTTGCTCAGACGAAGTG 58 13546979 13546997 GTATCTGTGAGTGCTGCTG 58 NA InUTR Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 2 2 2 85 2L 13387100 13387187 CTATTTAGACGGATTGGAAAGTCTG 59 13387039 13387057 CTGTTTGTGCTCGATCGTC 59 NA Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477,FBtr0302306 1 2 2 60 2L 13306359 13306379 CATATCTATTGCCCGAATGCC 59 13306319 13306340 ACGAATATGAACCAAGTGAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15483 FBgn0032457 FBtr0080402 1 1 1 133 2L 12761221 12761239 TCAATATGGGACGCAACGT 59 12760993 12761124 AATTCCAATCACTTGGCGG 58 NA Drosophila melanogaster 61 Pkd2 FBgn0041195 FBtr0080365 3 1 1 82 2L 12401344 12401362 AAGAACATGACACCAGCAG 58 12401468 12401539 CGGTTATTGAGACGAACCA 57 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0080346,FBtr0300567 1 5 5 88 2L 12304516 12304534 CAGTGCATTGTCCACTTCG 59 12304586 12310690 CCTCGGGTCCTTCAATCTG 59 NA Drosophila melanogaster 61 CG6579 FBgn0032422 FBtr0273342 3 1 1 215 2L 12177671 12177689 TTCAGTTGTTCAGCGTCTG 58 12176905 12176924 GAATCGATCTTGTCCTTGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 prd FBgn0003145 FBtr0080298 1 1 2 82 2L 12085078 12085470 CATGCAAGACATGAACAGC 57 12085014 12085032 TATTGTTGGGCAAAGGACG 58 NA Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 2 2 2 60 2L 12056425 12056509 TCAGACAAATATGCGGTGC 58 12056533 12056551 GATGCTTTAGCACCGACAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 spz4 FBgn0032362 FBtr0080238 3 1 1 92 2L 11507373 11507450 CTTGCGTGGAGTAAATGCC 59 11507506 11507524 TTGAGGAGGGCTAAGACCT 59 NA Drosophila melanogaster 61 mre11 FBgn0020270 FBtr0080213 2 1 1 80 2L 11283465 11283485 AGTAAGGTGGTTAAGCGTACC 59 11283527 11283604 ATTATCCGCTTCCAGTGCA 59 NA Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 3 2 2 82 2L 11003232 11003524 GAACATGATCAAGGGAGTCAC 58 11003170 11003188 AGGTGACACAGTTGATGGG 59 NA Drosophila melanogaster 61 abo FBgn0000018 FBtr0080168 2 1 1 128 2L 10974288 10974306 ACGGAAAGTCAGAAGTCGT 59 10974121 10974139 GGTATCGGTACCATTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7309 FBgn0032314 FBtr0301184 1 1 1 80 2L 10908166 10908186 TTGGTGAATCCCACAATATCC 58 10908054 10908127 CAAACCACCATTATCGTATTCC 57 NA Drosophila melanogaster 61 CG6737 FBgn0032294 FBtr0080120 2 1 1 118 2L 10737033 10737245 CTTTCGAAGGCTAGTCAGAC 58 10736934 10736955 TGGCAGATAGTAATCCATTTCC 58 NA InUTR Drosophila melanogaster 61 CG5343 FBgn0032248 FBtr0080044 1 1 1 80 2L 10430376 10430450 TTCGAGGTTCAGGTTCTCG 59 10430314 10430332 CTTGACACGAGTTGTCGAC 58 NA Drosophila melanogaster 61 CG5022 FBgn0032225 FBtr0079999 1 1 1 80 2L 10345912 10345995 AATAGTTCAAGAGGAGCTGG 57 10346037 10346056 CGCAGTGCTAATTCTATGGA 57 NA Drosophila melanogaster 61 CG5384 FBgn0032216 FBtr0080061 1 1 1 86 2L 10312897 10312969 TTCGAACTTACTTGGTGAGC 58 10312830 10312849 CATTTATGCCCTCCTTTCCT 57 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 3 2 2 81 2L 10236972 10236993 GGAACCGATTTCAAATTTGAGG 58 10236533 10236933 GAACAATACCGAAATCTGAGGG 59 NA Drosophila melanogaster 61 CG13135 FBgn0032184 FBtr0079966 3 1 1 62 2L 10122680 10122698 CATCTTTCTGGCCCATCTG 58 10122636 10122654 GTATCGGTGGGATCATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 2 2 2 252 2L 9967696 9967714 TGAAGACCTGGTTCAACCA 58 9967991 9968009 GATTTGTTCTTGCGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Dref FBgn0015664 FBtr0079889 2 1 1 80 2L 9965304 9965383 CTCTGGTGATTGCTTTGGAC 59 9965243 9965263 GAATCTTTGAAGTGATTGGCG 58 NA Drosophila melanogaster 61 CG4598 FBgn0032160 FBtr0079877 3 1 1 94 2L 9919026 9919045 TTAACTTGGAACTGCTGCAG 58 9919102 9919181 TGTGGAGCTAGACGAAGTC 58 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 1 2 2 80 2L 8978591 8978674 ATATGATGCTAATGAAAGCGCC 59 8978532 8978553 AGATCGATGAACATGCAAATCG 59 NA Drosophila melanogaster 61 CG13089 FBgn0032052 FBtr0079682 3 1 1 160 2L 8516154 8516175 GTGCCACTAAGTATTAAGCTGC 59 8516296 8516374 CCATGGGCCATGAATTTCC 59 NA Drosophila melanogaster 61 Peritrophin-15b FBgn0040958 FBtr0079714 2 1 1 128 2L 8394791 8394879 GAAAGCAGCTTTAGTCCTTCTC 59 8394684 8394703 CAGAAGTCACGGGAAATCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 1 1 1 95 2L 8376550 8376634 AAGAGGCGCAGTACTTCTC 59 8376473 8376491 CATTGCACCATAGCTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7806 FBgn0032018 FBtr0079600 2 1 1 82 2L 8315079 8315160 CTGAAGAAAGTCATGTTTGCCA 59 8315203 8315221 GTGTCCGAAGAGAATCGGT 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 2 4 4 80 2L 7728554 7728577 GTGCCTTACTCATATTACCATTGG 59 7728433 7728516 CCAACGTGATCCTCAAAGTG 59 NA Drosophila melanogaster 61 CG9232 FBgn0031845 FBtr0079322 1 1 1 80 2L 6667005 6667100 CGTTGTTATCGACGAGTGG 58 6666943 6666963 CCCTTGTTCTCGAATATCTGC 58 NA Drosophila melanogaster 61 cup FBgn0000392 FBtr0290322 3 1 1 92 2L 6665779 6668347 AACGGAGTTCCAAGATCCG 59 6668401 6668421 TAGTCTTCGTCGTTGTAACCC 59 NA Drosophila melanogaster 61 Oatp26F FBgn0051634 FBtr0079327 3 1 1 90 2L 6627591 6628523 TTACTTGGGCATCTACTACAC 57 6627521 6627540 CCAATCCGTATAGATGAGCA 57 NA Drosophila melanogaster 61 DLP FBgn0031820 FBtr0079260 1 1 1 92 2L 6486035 6486055 CGATGTGCTTCAAATACTGGA 58 6486109 6486187 TTAAAGGCATCGTAGGCGA 59 NA Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 1 2 2 80 2L 6445784 6445870 GATCCGCTCAATCTACTTAATGC 59 6445726 6445746 CTGTTCCTCAACTCGTTTCAC 59 NA Drosophila melanogaster 61 cl FBgn0000318 FBtr0079095 1 1 1 224 2L 5520414 5520432 ACAACGTCAAGGGATACGA 58 5520693 5521146 AATCCTTCCAGTATGCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 1 2 2 92 2L 5331186 5331270 GTATCCAGATAACAAGCTGCTG 59 5331115 5331133 ACCAGGATGGAATTGGAGC 59 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 1 2 2 81 2L 5324771 5324789 CAATTCGAGGGCGATTCTG 59 5324646 5324731 GTGTCTCGTTTACATTATCCTTGG 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 1 5 8 92 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG14040 FBgn0031676 FBtr0079009 2 1 1 86 2L 5053093 5053112 AATTGGCGTGAATTGTTCCC 60 5053161 5053249 GACAAAGATGCCCTGTCCT 60 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 2 2 2 168 2L 5048718 5048807 CTTTGCCAGGTTGCTATGC 59 5048568 5048586 GAGACTCCGACGAATCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 2 3 3 60 2L 5044640 5044660 CTCCTACAGCCACAAATATCC 58 5044681 5045832 GATGTCGTCAGCTTTCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34126 FBgn0083962 FBtr0290010 3 1 1 80 2L 4991070 4991154 CGGATAATTATAGGCACAAGACC 59 4991194 4991212 TGCTTATATCGTCCTGGGC 59 NA Drosophila melanogaster 61 Sgs1 FBgn0003372 FBtr0077393 1 1 1 114 2L 4937415 4937433 ATAGCTCCACTGCAAGGAG 59 4937576 4937594 TGCATACTATCCCAGTCGT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15629 FBgn0031630 FBtr0077383 2 1 1 80 2L 4813497 4814778 TCGAAAGTTAAAGGACATCTCC 58 4814818 4814837 TTTAGGGCAATCAAACGTCC 59 NA Drosophila melanogaster 61 CG15631 FBgn0031626 FBtr0077419 3 1 1 150 2L 4734243 4734315 TCAGATCCGGAATACAATAGAG 57 4734114 4734132 ATTTCGTACAGAATCCGCC 58 NA Drosophila melanogaster 61 Bsg25A FBgn0000227 FBtr0077423 2 1 1 189 2L 4684304 4684380 CAGCACAATGATTAACCGC 57 4684133 4684151 ATTTGCATCTTGAATGCGC 58 NA InUTR Drosophila melanogaster 61 CG15422 FBgn0031579 FBtr0077505 1 1 1 60 2L 4005057 4005076 TGCGGTACTATGAAGATCCA 58 4005098 4005117 ATATTTGGACGACCATGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp23F FBgn0259949 FBtr0300295 2 1 1 180 2L 3387652 3387671 TATTTGGCTGTGTTTCAGCT 58 3387423 3387442 TCGCATTCCTTAATGCTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089749 1 1 4 150 2L 2741043 2741118 GAATCCCTTGACACCATGAC 58 2741231 2741249 TGGTGAAGGTGAACTCCAC 59 NA Nonspecific Drosophila melanogaster 61 CG10908 FBgn0031376 FBtr0077813 1 1 1 80 2L 1974466 1974567 CATCGTTCAGTACAGCTCC 58 1974610 1974629 GACACGATCAACAGGTACAG 58 NA Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 2 1 1 78 2L 1883794 1883812 ATCAGGATGCTTGGAAGCT 59 1883184 1883755 TTCAAGATGGATTCAAGTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 3 1 1 119 2L 1755474 1755494 CACGACGATGAAGAGTTAGAG 58 1755313 1755333 CATTTGAAAGCCCATGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17652 FBgn0031361 FBtr0077904 1 1 1 131 2L 1731803 1731887 AATCGATGACCAAAGACAATCG 59 1731693 1731712 TAGATGGTGCTTCCAAGACG 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 1 5 6 195 2L 1726645 1727653 AGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925,FBtr0077924 1 2 2 60 2L 1344752 1344770 TCGACAAGAAGTACAACCC 57 1344794 1344812 ACATAGGATCCGAAGTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 psh FBgn0030926 FBtr0074629 2 1 1 101 X 18379398 18379416 CAACACCGATGCCAATACG 59 18379257 18379335 ATCTTAACGCTTCGTATGACG 58 NA Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 3 1 1 63 X 17102640 17102658 TTAGTACGTGGTCATGCTG 57 17102685 17102764 GTATGGGTGGTCCATAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074110 3 1 6 137 X 15754269 15754781 AAGTTAACACTGCGTTCGT 58 15754881 15754900 CTTCCGATAGATGGGTAGGA 57 NA InUTR Drosophila melanogaster 61 btd FBgn0000233 FBtr0071379 1 1 1 155 X 9589296 9589314 CATCCTCCTCACCATCCTC 59 9589433 9589890 GAAACTGACTTCTCGCTGG 58 NA Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 1 2 2 274 X 8375954 8375972 GATCGACCTACATTTGGGC 58 8376436 8376454 AATGTTCTGGTCGGATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300878,FBtr0300879 1 3 3 202 X 2278537 2278893 TGTACATGTGATTCGCTGTC 58 2278354 2278372 ATCGCTGATCGAAGTACGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14785 FBgn0027795 FBtr0070231 2 1 1 114 X 1349969 1350063 AGATCGAGATATTCCTTTCCGT 59 1349876 1349894 TACCAAGTCGGCATCAAGG 59 NA Drosophila melanogaster 61 CG15549 FBgn0039810 FBtr0085752 1 1 1 60 3R 26762129 26762147 CTGGCCCAAATTATCCCTC 58 26762087 26762105 TGGGATCTGAGCAGTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587 2 1 2 96 3R 25953956 25953974 GAATGTGGAGCTAACCTGC 58 25953812 25953896 GACCGCATCTTCTTTGAGG 58 NA Drosophila melanogaster 61 dan FBgn0039286 FBtr0084803 3 1 1 201 3R 21011079 21011097 TATCACCGAATTTCTCCCG 57 21015718 21015736 GGATGGCATGGATCTTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5933 FBgn0039139 FBtr0084532 1 1 1 89 3R 19858406 19858493 GAGAAAGTTGGAAGTCGACG 59 19858545 19858563 AGGCTTGTGGACTCTTTCC 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184,FBtr0081572,FBtr0302183 3 3 3 80 3R 3016502 3016858 CAAAGGAACTGTACAAGATGGT 58 3017123 3017141 TAGCGCCGAATAAAGGGAG 59 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 2 3 3 143 3L 22870965 22871045 TTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 DNApol-alpha60 FBgn0259676 FBtr0078241 1 1 1 60 3L 20353452 20353471 GATTATCAAGGATGTGGCGG 58 20353411 20353432 ATCCATGTTCTTATACGGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 2 2 2 86 3L 18747722 18748241 AAATTGTGCTTCGATTCTGG 57 18747591 18747609 TTCACGAATCATCGGTGAG 57 NA Drosophila melanogaster 61 Met75Ca FBgn0028416 FBtr0075115 1 1 1 60 3L 18465430 18465451 ATGGTTTCTTGCTAGTCTTCCT 59 18465391 18465409 GTTGCTATCTGTGCATCCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302647,FBtr0302649,FBtr0302651,FBtr0302648 1 5 5 80 3L 16984292 16984312 TGATTACGACTCCTTTGAGAC 57 16984351 16984434 CTGTCATTGTAGTTTCTTTGCC 58 NA Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 1 2 2 135 3L 8642731 8642817 GCTACAAGCCAACTGTACG 59 8642916 8642934 ACAATCCATCGGACCACTC 59 NA Drosophila melanogaster 61 Lcp65Ad FBgn0020641 FBtr0076990 3 1 1 118 3L 6136688 6136797 CTACAAGTTTGCCGTGGAG 58 6136879 6136897 CACCGACATAGGCATAGGA 58 NA Drosophila melanogaster 61 CG42234 FBgn0250756 FBtr0290136 2 1 1 132 3L 1924959 1924977 CGCAATCCCTACATGAGTG 58 1925349 1925427 TCTGGGAATCTGAGAAGACG 59 NA Drosophila melanogaster 61 CG9194 FBgn0035192 FBtr0072651 2 1 1 82 3L 1236712 1236730 GTGGTTTCCTATTGCGTGG 59 1236775 1236853 TGTATGTCTCGCTTCACCTC 59 NA Drosophila melanogaster 61 CG9083 FBgn0035077 FBtr0114563 2 1 1 81 2R 20785872 20785959 CCCGTTTCATAATCAGTGCG 59 20786003 20786021 ATGTGGACATGCTCTCGTC 59 NA Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086479,FBtr0086478 3 2 2 99 2R 15588518 15588538 CCTCACTCTTAGTGAATTCGT 57 15588281 15588299 CATCGACATGTTCAGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Adgf-E FBgn0033952 FBtr0087482 3 1 1 133 2R 10545271 10545290 TGGAGCGATTTAAGAAGGAG 57 10544990 10545177 GCTGGGAAACTCTTTATTCAG 57 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299856 1 1 4 80 2R 7182286 7183015 CATACTCATTGTCTTTGCTCTC 57 7182227 7182246 AGTTTCTCCTGCTTCTTGAG 57 NA Nonspecific Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467 2 1 2 121 2R 5594028 5594046 TTTCTCCACATTTCCGGTG 58 5594184 5594268 ACTCTTATCTCCTTAGATCGGG 58 NA Drosophila melanogaster 61 bur FBgn0000239 FBtr0301342 2 1 1 80 2L 21176598 21176681 ATAAGGTGTTGCTCCTGGT 58 21176536 21176554 GATGAGGGTACAAAGCACG 58 NA Drosophila melanogaster 61 wek FBgn0001990 FBtr0080764 3 1 1 83 2L 15768154 15768173 TTGTATACAAAGTGCGCGAG 59 15768030 15768108 GTTCCTCGAGGGTCATCTC 59 NA Drosophila melanogaster 61 MED20 FBgn0013531 FBtr0079544 1 1 1 60 2L 8072131 8072150 GGACACCGTGAAACAATACC 59 8072090 8072110 CATAAGAGTCACATGCTTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3862 FBgn0031286 FBtr0078038 3 1 1 60 2L 824881 824901 GTACGGACAGCTAGATGACTC 59 824841 824865 GAGAGCTCTAGGGATATTTATTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15824 FBgn0031292 FBtr0078029 3 1 1 88 2L 884375 884449 CATAGTTGTACTGGACAAGCTG 59 884308 884326 CATAGTGCGTCTTGTTGCC 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 2 4 4 80 2L 123790 123872 TATTACGATCCTATCATTCCCG 57 123731 123750 TAGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 2 2 2 114 X 16999010 16999524 GAAGTTAAGTCGGAGGTGG 57 16998914 16998932 TATAGAGCTCCTGCTGACC 58 NA Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302449 1 1 4 102 X 2476601 2477037 CGAACTGAATCTTCTTTACCATCC 59 2477098 2477116 ATCACCTGTTCACTGTGCT 59 NA InUTR Drosophila melanogaster 61 CG5589 FBgn0036754 FBtr0075170 2 1 1 104 3L 17796346 17796364 TACATTCATCGGATCGGCA 59 17796199 17796278 TATAAGCGCGATGCCTCTC 59 NA Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113721 1 1 3 86 XHet 69223 75534 GTCACATTGGATCCGACGA 59 69155 69173 CGTTGTAAGTCTCGTCGGA 59 NA Nonspecific Drosophila melanogaster 61 CG33664 FBgn0053664 FBtr0302417 2 1 1 73 X 6278304 6278383 GATTCTTGACTACTCCGAAGC 58 6278418 6278436 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14062 FBgn0039592 FBtr0100373 1 1 1 80 3R 24468037 24468125 GCCCTTCTATATCACCCGA 58 24467975 24467995 ACCGTATAGCTAGCTTCATCC 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 1 4 4 99 3L 13884420 13884438 AGCTACCACTACAGCAACG 59 13884044 13884357 CCCGATAAATCTGGTGGGT 59 NA Drosophila melanogaster 61 Tim10 FBgn0027360 FBtr0071676,FBtr0071677 2 2 2 60 2R 17577905 17577923 GAGAAGATCGGCAAGAAGC 58 17577863 17577882 TCTTCTTCATCAGCTCCTCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224 3 1 2 129 2R 6707494 6707581 CACTCTACAAGAGCTTTAAGAATGG 59 6707668 6707686 CCAGATTGCACATAAGCCC 59 NA InUTR Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 2 2 2 60 X 13200438 13200458 GTTAGCGACTATTCGGATGAC 58 13200478 13200498 AGTATTCCATTTCCTCCATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 2 2 2 107 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412949 ATAGTGCCATCCATGACCTC 59 NA Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 3 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 1 2 2 99 X 18734583 18734674 TCATGAAATCAACCGTGAGGA 59 18734735 18734753 TAGTAGTTCGCCTCGTCCT 59 NA Drosophila melanogaster 61 OdsH FBgn0026058 FBtr0074461 1 1 1 84 X 17705933 17707354 GTATAGCGGTTTGGTTCCAG 58 17707401 17707419 TTATGAGCTGGTCGTCCAG 59 NA Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539,FBtr0114540 3 2 2 229 X 17115617 17115635 TGCTGATCGCCTTAACCTC 59 17116181 17116199 GTTCTTCTGCCAACCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8918 FBgn0030823 FBtr0074403 1 1 1 88 X 17096277 17096295 GGAACTTCTATTGGGCGTG 58 17096156 17096228 GTTAATGACTTGATCTGATCGC 57 NA Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075,FBtr0100271 2 2 2 116 X 15362479 15362561 ACGATCACGGATTCCTGTC 59 15362381 15362399 GTGCAGGTGATGGTAATGC 59 NA InUTR Drosophila melanogaster 61 Ste:CG33246 FBgn0053246 FBtr0300095 1 1 1 110 X 13942248 13942266 TCTGATACACAGCTGGACG 59 13942096 13942174 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 3 2 2 80 X 13114117 13114136 CAAGGAGGATCAATGGATGG 58 13113904 13114074 CAGACGATTACCTTTCCGC 58 NA Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 3 1 1 169 X 13054899 13054917 TCCACAGGGCAAGATACTG 59 13055049 13055124 TAATGATTTCTGTGGCAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12637 FBgn0030224 FBtr0071504 2 1 1 60 X 10567214 10567232 TGGTCAGTGTCTTTGTCCA 58 10567172 10567190 GAGTTGCGCACTAGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab9Db FBgn0030221 FBtr0071507 3 1 1 132 X 10517082 10517100 AATTCACCGAAAGACACCG 58 10516968 10516986 TTCAGCAATTTGAAGCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 p115 FBgn0040087 FBtr0071089 1 1 1 60 X 7788460 7788478 GAGGAGGCTGATAATCCCA 58 7788502 7788520 TGAACATCTCCGTGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NELF-B FBgn0027553 FBtr0071077 3 1 1 101 X 7622250 7622268 GACGTGAATATTCCGGGTC 58 7622089 7622187 CAATACACCATTCTCAAGCTG 57 NA Drosophila melanogaster 61 CG15035 FBgn0029949 FBtr0071063 1 1 1 60 X 7296442 7296465 CCTTATATGCAGCAAATATCGGAG 59 7296405 7296423 ACCACTTTACCAGATCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 3 3 3 120 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649217 AAGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 Vsx1 FBgn0029775 FBtr0070781 2 1 1 96 X 5489115 5500127 AGTTTGCAGAACAAGCTGC 59 5500186 5500205 GAACTGCTATTCTTGCTGGG 59 NA Drosophila melanogaster 61 CG3081 FBgn0025613 FBtr0070693 2 1 1 68 X 4534856 4534874 ATACGGATCACTTGGAGCG 59 4534806 4534824 AGATTAGATCCTTGCCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632,FBtr0070633,FBtr0070631 3 3 3 82 X 3759157 3759176 CTATCGCTGGTGTATAGCCT 58 3759038 3759112 GTCACAGCTTTAGTTGGCA 58 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 Su(Ste):CR42406 FBgn0259837 FBtr0300134 3 1 1 82 U 5414583 5414601 TGGGCCTGTAGTACTTCAG 58 5414647 5414665 CATCGTCGTAGAACAAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300885,FBtr0300886,FBtr0300882,FBtr0300884 1 5 5 80 4 881004 881080 CCGCCAAAGTTGATGTACC 59 880942 880962 TTCGGACATAGTCCTTTACCT 58 NA Drosophila melanogaster 61 CG9702 FBgn0039787 FBtr0085664 1 1 1 80 3R 26407082 26407102 GCGATTATTATATCGGCAGTG 57 26407144 26407220 TAGATCGGAACGTTTGCTG 58 NA Drosophila melanogaster 61 Gycalpha99B FBgn0013972 FBtr0085453 1 1 1 82 3R 25509286 25509304 AACGAGGATCTCAACACGG 59 25509350 25509428 TCCAGTTTGAGCTTGTGGA 59 NA Drosophila melanogaster 61 CG2014 FBgn0039669 FBtr0085440 1 1 1 67 3R 25342133 25342151 AATGTACGGAATCCTGCAG 57 25342182 25342200 TCCTGTACCACATCTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 1 3 3 80 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905450 21907624 CAAGACAACCTTCTGATCGC 59 NA Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089440 2 1 2 80 3R 20741417 20741438 TACACTAGCATTTATCGTGGTC 58 20741300 20741379 AAATTGACTCTGTAGACTGTGG 58 NA Drosophila melanogaster 61 CG13833 FBgn0039040 FBtr0084362 1 1 1 89 3R 18859821 18859957 CATACAAGGCCAATGTAACCA 58 18859752 18859770 TAACCAGGACGGTAACTGG 58 NA Drosophila melanogaster 61 Nop56 FBgn0038964 FBtr0084230 3 1 1 154 3R 18246038 18246121 AGCTGGTCAAGGGATTCAC 59 18245902 18245923 TACGTCCTTATCCAACTGATCC 59 NA Drosophila melanogaster 61 lbl FBgn0008651 FBtr0300061 3 1 2 81 3R 17259035 17259053 TCAAGTGGAGACACTCCCT 59 17252811 17258992 TCTTTGATGTACTGACCTGCT 59 NA Drosophila melanogaster 61 CG31207 FBgn0051207 FBtr0084044 3 1 1 81 3R 16872101 16872122 GAGTATCGCAATAATAAGCGCT 59 16871977 16872060 CTAGCCAGAATACCCATCGG 59 NA Drosophila melanogaster 61 CG10877 FBgn0038804 FBtr0083950 1 1 1 60 3R 16388722 16388741 CAAGACCAACAAGGATCGTG 59 16388681 16388700 CATTTGCTCTAGGATTCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34138 FBgn0083974 FBtr0113486 2 1 1 81 3R 15460926 15461002 CAACATTGGTGAACTATCTGTG 57 15461041 15461062 GCCTTCACCCAAATTATAAACG 58 NA Drosophila melanogaster 61 CG7342 FBgn0038716 FBtr0083777 1 1 1 80 3R 15431292 15431570 CTGCATCGGATAAGACCAC 58 15431613 15431632 CTGAATTGTAGGCCACTGTC 58 NA Drosophila melanogaster 61 CG6040 FBgn0038679 FBtr0083729 2 1 1 83 3R 14955610 14955628 AGCTATTACGGTAGCGAGG 58 14955675 14955760 GTTCTTGTTAGCCTGTGGC 59 NA Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307,FBtr0083586 2 2 2 108 3R 14190477 14190554 TCGATGTCTATATTGGTCAGGT 58 14190390 14190408 TTAAAGGCAGCATCTCCGT 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232,FBtr0110973,FBtr0083233,FBtr0110974,FBtr0083229,FBtr0083231 2 6 6 80 3R 11895870 11895888 GGCTTTACAGCGAATAGCT 58 11895747 11895826 AGGCTTTCATCACTTTCGC 58 NA Drosophila melanogaster 61 CG31296 FBgn0051296 FBtr0083155 2 1 1 99 3R 11357137 11357157 TTTCATTCCCTTTGGATGCAG 59 11357003 11357076 GACGCTGAATTTCGATGGG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 1 7 13 125 3R 11122321 11122339 AAATTCTTGAGAACCGCGC 59 11122428 11125014 CCAATTTACGGGCAACCTC 59 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 2 3 3 178 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795022 8795040 GATCGAACTCGTACTCGCA 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 mRpL40 FBgn0037892 FBtr0082384 1 1 1 130 3R 7233730 7233813 CTTTGCCAGATTGAGTCTGC 59 7233906 7233924 TGACAATCTGCGGATCCAG 59 NA Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105 1 1 2 136 3R 5415710 5415729 TCTACGATCAGCCGAATGAC 59 5415493 5415611 GCATCACTGACACAGAGGT 59 NA InUTR Drosophila melanogaster 61 RhoL FBgn0014380 FBtr0082124 3 1 1 92 3R 5323662 5323680 TCGGGACTACAATCTGACC 58 5323511 5323606 AGGAAGCAGTTGGTACTGG 59 NA Drosophila melanogaster 61 CG42489 FBgn0259992 FBtr0300441 2 1 1 60 3R 4479735 4479753 AGCTACTGGATGTTTGTGC 58 4479693 4479716 CACTGTAGTTCGATATCATTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tom34 FBgn0010812 FBtr0081788 3 1 1 80 3R 3860594 3860672 CCAGAGAAGGAATACTGCAG 57 3860715 3860733 GGCACTCACATGATACTCG 58 NA Drosophila melanogaster 61 CG18744 FBgn0042101 FBtr0114516 2 1 1 109 3R 3624048 3624365 AATCAAAGCAATATGCCTGGAG 59 3623960 3623978 AACTCTGAACCACCACTGG 59 NA Drosophila melanogaster 61 Rtnl2 FBgn0015831 FBtr0081548 1 1 1 60 3R 3355237 3355258 ATCTTACGTTTCTATCCTCACC 57 3355198 3355218 CCAGATAAAGAGTCTCCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31248 FBgn0051248 FBtr0081564 3 1 1 102 3R 2956077 2956150 AAATTCAGTATGCACCACCA 57 2956212 2956233 ATCATAAAGTCCATTAGACGCC 58 NA Drosophila melanogaster 61 hd FBgn0086695 FBtr0078802 3 1 1 103 3R 1200101 1200181 CCCAGATGACTTCATCAAACTG 59 1200019 1200037 CATCCACTTGGTGTCTTGG 58 NA Drosophila melanogaster 61 kni FBgn0001320 FBtr0078283 1 1 1 83 3L 20687418 20687436 ACCAGACATGCAAAGTGTG 58 20687138 20687371 CAAAGAAGGACTTGCAGCC 59 NA Nonspecific Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 3 2 2 138 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997627 19997645 GGCATTGGTCTGATTAGCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 2 2 2 85 3L 19678980 19679065 GAAGTCGGTGAAACAGTGTC 59 19678914 19678932 GCATCAGTGTCCTCAATCG 58 NA Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 2 2 2 80 3L 18865208 18865281 GCAACATGAATGAGGTGGAG 59 18865147 18865165 GCTTACAGCGGAGATTCAC 58 NA Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0114591,FBtr0075063 1 2 2 90 3L 18862847 18862865 TCGATGGAAATCCCGATGG 59 18862984 18863002 TTGCCATCGATAAAGACGC 58 NA DesignNoJunction Drosophila melanogaster 61 frc FBgn0042641 FBtr0299820,FBtr0075228 1 2 2 60 3L 17425339 17425359 CCTAATGTACTACAACTCGCT 57 17425299 17425318 TGTAACATAGTTGAGGGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Galpha73B FBgn0010223 FBtr0075354 3 1 1 80 3L 16656830 16657849 ATGAACGAGGAGTACTGCG 59 16656768 16656788 CTCATTTGAGCGATCATAGCA 58 NA Drosophila melanogaster 61 CG4842 FBgn0036620 FBtr0075384 1 1 1 81 3L 16361581 16361599 GTTTACCTTGGCGGATTCG 59 16361641 16361720 AAATGGCTAGAGCCTTTATTGG 58 NA Drosophila melanogaster 61 CG4893 FBgn0036616 FBtr0075425 2 1 1 186 3L 16349123 16352406 TAACAAATATCCACCATGTCCG 58 16348958 16348976 TTATCAGCTTGCCATCGGA 59 NA InUTR Drosophila melanogaster 61 CG33060 FBgn0053060 FBtr0075374 3 1 1 89 3L 16324152 16324170 TTAGAATCGCCCACTGGTG 59 16324222 16324561 AGTCTTATTCGGACTGTGGC 59 NA Drosophila melanogaster 61 Eig71Ec FBgn0004590 FBtr0075586 1 1 1 152 3L 15644933 15645030 CTTGTCGATTGACACTCGAG 58 15644800 15644818 GGGTCCTACGAGTAGTTCG 59 NA Drosophila melanogaster 61 mRpL39 FBgn0036462 FBtr0075672 3 1 1 101 3L 14992134 14992152 AGTGTTCCCTGGGATATGC 59 14991987 14992070 CCAGAATGCTTTGTTGACCA 59 NA Drosophila melanogaster 61 CG33490 FBgn0053490 FBtr0089526 2 1 1 80 3L 11567119 11567202 TTAATCGCAGATACTCAAAGCC 59 11567060 11567081 TCTTGATACCTGAAGGATCGAG 59 NA Drosophila melanogaster 61 CG32053 FBgn0052053 FBtr0076315 1 1 1 95 3L 10084474 10084627 CATTAATGGAGTTCTGTTCGC 57 10084399 10084417 TATATCTCCCTGCCAGCAG 58 NA Drosophila melanogaster 61 CG34356 FBgn0085385 FBtr0112566 2 1 1 80 3L 9942165 9942184 CTTCAATAACGGAAGGCCAC 59 9942227 9942702 AGATCATCCAGCGTTTCCA 59 NA Drosophila melanogaster 61 CG4447 FBgn0035980 FBtr0076444 3 1 1 61 3L 9358069 9358090 CTATCCAAGAATGCCAAAGCTC 59 9358112 9358130 TTCTGAACGCCTCGTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6576 FBgn0035924 FBtr0076576 2 1 1 60 3L 8749982 8750004 GATGAGTTTACGAAATCCGATCC 59 8750023 8750042 TCAAATCAGTAGTTGGCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL36 FBgn0042112 FBtr0076735 1 1 1 77 3L 8118114 8118133 CCTGGCTAGTAGAATACTGC 57 8118056 8118074 GTGAGAAGGTGGAAACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr65Au FBgn0042119 FBtr0077060 3 1 1 97 3L 6124695 6125057 ATTCCTTTGCCTATGAGACGA 59 6124618 6124636 CTGGACAGACAAGGAACCA 59 NA Drosophila melanogaster 61 ImpE2 FBgn0001254 FBtr0073141 1 1 1 60 3L 3511266 3511285 GTTATTGTGGTCAACGACGA 58 3511225 3511243 CCACTGGATGATTCTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg2 FBgn0044452 FBtr0072970 3 1 1 251 3L 2774384 2774403 TTGATGGTCACTTGCTACTG 58 2774698 2774716 ATCCCAGGGATTGAACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Psf1 FBgn0035194 FBtr0072731 3 1 1 60 3L 1247409 1247427 CCTACCTATACGAGCGGTG 59 1247367 1247386 ATAATGGGTCCAAACTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lcp1Psi FBgn0011812 FBtr0088762 2 1 1 83 2R 4320870 4320888 TCATGCTCGTGAGTAACGG 59 4320762 4320780 TTTCGAAACGTCCTACGGA 59 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33399 FBgn0053399 FBtr0086391 1 1 1 60 2R 15636742 15636760 ATACATCGGTTCTCGTCCG 59 15636700 15636718 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33407 FBgn0053407 FBtr0086399 1 1 1 60 2R 15633800 15633818 ATACATCGGTTCTCGTCCG 59 15633758 15633776 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42646 FBgn0261429 FBtr0302350 3 1 1 151 2R 1253052 1253129 ACTCCGCTCATTTGGACTC 59 1253243 1253262 GGAACTGTTCCTAGGATCCG 59 NA Drosophila melanogaster 61 CG12851 FBgn0035086 FBtr0300763 3 1 1 81 2R 20840454 20840475 TTAAAGCGCAAGGTATACAAGG 59 20840515 20840587 GTCCGTTTGAATCCAATTCGA 59 NA Drosophila melanogaster 61 CG12848 FBgn0040666 FBtr0072437 3 1 1 92 2R 20650488 20650566 GAAATTACGAGATGCGCGT 59 20650414 20650432 GCAGAATCTCCTGGAAGGG 59 NA InUTR Drosophila melanogaster 61 CG34214 FBgn0085243 FBtr0112407 3 1 1 81 2R 20553348 20553431 GTTCCTTACATAAATCCTCTGTACC 59 20553291 20553310 GCACTTGGATAATCGATCCG 59 NA Drosophila melanogaster 61 ppa FBgn0020257 FBtr0071924 2 1 1 60 2R 18575395 18575414 TAAACAGATCACGGACACGA 59 18575354 18575375 GGTCTCAAGATTCCTTAGATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 2 8 8 80 2R 17194841 17194918 GGTCTTAAAGGAGGATCAGCA 59 17194959 17194978 ATTGTATTGGAAACGCTGGG 59 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 1 3 3 81 2R 17069022 17069041 CTTCTACGGCAAAGTTTCCA 58 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 dgt3 FBgn0034569 FBtr0273414 3 1 1 86 2R 16880215 16880292 CAACTGGCAGAACTCAAGC 59 16880147 16880165 AACGTTCTCAAACATGGGC 59 NA Drosophila melanogaster 61 CG30148 FBgn0050148 FBtr0086266 3 1 1 60 2R 16434927 16434945 TAAACGAGGAGTTCGACGG 59 16434885 16434904 TTGGCTTTCGGAATATCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pen-2 FBgn0053198 FBtr0089842 1 1 1 165 2R 14165179 14165266 CTTCTTTGCTGGCTTTGCA 59 14165467 14165487 GGCAGTTAGTACTATCAGCCA 59 NA Drosophila melanogaster 61 DAT FBgn0034136 FBtr0087125 1 1 1 80 2R 12448481 12448563 ACCAAATTGTAGACCGTTTGAG 59 12448422 12448440 CCCATGGCATACAAGTCAC 58 NA Drosophila melanogaster 61 Ranbp11 FBgn0053139 FBtr0087278 2 1 1 65 2R 11572389 11572407 TTCCTCTACAGCGTGATCG 59 11573738 11573756 TTCGATGAGGTAGACGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30467 FBgn0050467 FBtr0087334 1 1 1 80 2R 11426961 11426980 GCAACTCATTCCATTAGGCG 59 11427021 11427099 TAGAAGTACTTCAGGCGACTC 59 NA Drosophila melanogaster 61 CG34444 FBgn0085473 FBtr0112748 2 1 1 88 2R 10257486 10257566 TTCGAATTGCATGGATTAGGC 59 10257614 10257634 CCATTGAGATCTCCCAATTGG 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 3 4 4 80 2R 8191682 8191701 TACAATAAAGCAGCATGCCG 59 8191551 8191641 TCCCTTAGATCGCTTATCTGC 59 NA Drosophila melanogaster 61 Cpr47Ee FBgn0033602 FBtr0088114 3 1 1 125 2R 7153158 7153178 AACTCAATCTGGATGGAAGCT 59 7153265 7153628 ATCCCTGAATCACCTGTGC 59 NA Drosophila melanogaster 61 CG34223 FBgn0085252 FBtr0112416 1 1 1 80 2R 7123446 7123525 CCACCTCAAAGTTCAGTTCC 58 7123566 7123586 AAGACGACTAAAGACAAGACG 58 NA Drosophila melanogaster 61 CG7737 FBgn0033584 FBtr0088105 2 1 1 129 2R 7110515 7112096 GATATTCAGTTACCCGGAATGAG 58 7112185 7112203 CGAGCACATTCTGAAAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198,FBtr0113065 3 2 2 97 2R 6791587 6791667 CCATCCACTTGCTGATAGC 58 6791728 6791746 CTCCTCGTAGGCAATCCTC 59 NA Drosophila melanogaster 61 CG12934 FBgn0033541 FBtr0088213 1 1 1 60 2R 6536740 6536758 CCAGCGATTGGAGTTTGAG 58 6536782 6536800 CAAATGTCCCTGAGGAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 3 2 2 109 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848344 5848362 GAAGATTACCACGTTGCCG 59 NA Drosophila melanogaster 61 CG8216 FBgn0033358 FBtr0088671 2 1 1 98 2R 4851215 4851289 GTGATCAACGGAATGTGCT 58 4851135 4851153 ATCTACACAGTCGAAGGCA 58 NA Drosophila melanogaster 61 dpn FBgn0010109 FBtr0088803 2 1 1 90 2R 4119188 4119437 ACTTAGAAAGACCAACAAACCG 59 4119119 4119139 CTCCAGGATAAGGGACTTCAG 59 NA Drosophila melanogaster 61 CG1942 FBgn0033215 FBtr0088928 2 1 1 80 2R 3600483 3600503 CTGATGGTAACTTACTTGGCC 58 3600545 3600621 TATCATCCAGCCATTGCCA 59 NA Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 2 2 2 84 2R 3039481 3039499 TTCATTAACGCAGTGGAGC 58 3039349 3039436 CTTTAAGCAATCCAGTTTCCAG 58 NA Drosophila melanogaster 61 Tsp42Eo FBgn0033136 FBtr0089035 2 1 1 81 2R 2943271 2943353 GATGGTGGTGAACTTGATTCTG 59 2943392 2943413 CTGTTTGGTCTCATTGTAGTGG 59 NA Drosophila melanogaster 61 CG9447 FBgn0033110 FBtr0300359 3 1 1 82 2R 2762345 2762424 CACTAATGGATCGACGACAG 58 2762282 2762301 TGAGTTATACGGCTCAACCA 58 NA Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 1 2 2 80 2R 2722367 2722386 ATGAAATGGTGACAAGCACG 59 2722427 2723013 GTTGCATCTGTCCAAGATCTG 59 NA Drosophila melanogaster 61 Rab2 FBgn0014009 FBtr0086124 2 1 1 136 2R 2585073 2585566 GCTTTCAGATCTATCACACGC 59 2585664 2585682 ATGTTCGAGTTCGAGTGCT 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114362 2 1 5 101 2R 2391113 2391131 AACAACTGGAGGAGAACGT 58 2391191 2415537 CAGGCAGAAGTATCTATTTACCTG 58 NA InUTR Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 3 2 2 107 2R 358353 358371 CAGTCTTGGCTGATGTCAG 58 346012 358282 CACTTCTAACACTCGGGTC 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-525c FBgn0083036 FBtr0113542 2 1 1 67 2L 20418858 20418879 CGATCTTCCTGTAACTTGTGTC 59 20418907 20418925 TATTCAGGATGCCGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 3 5 5 86 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666299 21666317 ATGCGAAGCATTTCGTTGG 59 NA Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 3 2 3 108 2L 19581865 19582014 CCAAACAATCGACATGGAGG 59 19581776 19581795 CTTGTGGTTCCACTTAAGGC 59 NA Nonspecific Drosophila melanogaster 61 CG10189 FBgn0032793 FBtr0081284 3 1 1 60 2L 19492027 19492045 CTCACGTTATGGGATGGAG 57 19491985 19492005 AAAGGCTGATGTAAGGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 3 4 4 110 2L 18827244 18827517 CACTATTAGCTTAGAGGACTTCGA 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0081085,FBtr0081086,FBtr0300676 1 4 4 95 2L 18483894 18483915 CGATCAGGACATGTTAATGAGG 59 18476903 18476988 GAAGTCATTAATCTCTTGGGACTG 59 NA Drosophila melanogaster 61 CG31786 FBgn0051786 FBtr0300069 3 1 1 93 2L 18210621 18210639 CATAACAAGTCAGCGGAGC 59 18210138 18210565 AGAGGAACCTACTGAAGTGG 58 NA Drosophila melanogaster 61 CG34313 FBgn0085342 FBtr0112511 2 1 1 60 2L 16885685 16885703 AGGTTATAGCCAAGCTGTG 57 16885727 16885805 TCGTATTTGCCCACTACGT 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 UK114 FBgn0086691 FBtr0080746 1 1 1 81 2L 15274379 15274627 CAAGCGGGTGTTCAATAAGG 59 15274317 15274335 GATCTCCACCAGAGCATCC 59 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 1 5 5 80 2L 13634172 13634251 ACCTACAGAGATTTCACTGGC 59 13634293 13634311 CTCGCAAATTCCACCAGAG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090021,FBtr0090017,FBtr0090013,FBtr0090023,FBtr0090018,FBtr0090026,FBtr0090022,FBtr0090016,FBtr0090029,FBtr0090015,FBtr0090025,FBtr0090014,FBtr0090019,FBtr0090027,FBtr0090024,FBtr0090020 2 17 17 80 2L 12724058 12724211 GAGTGGCATTAAGGTGCTC 58 12724254 12724273 ATCTCCTTGTCACGGATGTC 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 3 4 4 80 2L 11139909 11139983 ATCAGATGCTACCAAGACCC 59 11139848 11139866 TAGTGACACAGTCGAAGCA 58 NA Drosophila melanogaster 61 Muc30E FBgn0053300 FBtr0302413 1 1 1 153 2L 9903054 9903194 GCTATGCCATTTATTCTGTCGT 59 9902922 9902944 GGATTTATCCAGCAGTAATCAGG 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817,FBtr0079818 2 2 2 140 2L 9251869 9251952 GTGGCTCAAGTAATGCCAG 58 9251747 9251765 GTTAAGGGTGTCCTCGTCC 59 NA Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 1 2 2 86 2L 8712294 8712396 TTCGCAGCAAGAATACCTC 58 8712226 8712244 TTATCCAATACGGGCAGAC 57 NA Drosophila melanogaster 61 CG7787 FBgn0032020 FBtr0079601 2 1 1 124 2L 8320513 8320531 CACCTACAACCAGGAGGAG 59 8320688 8320707 TCTCGAATGTCATCATGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8673 FBgn0031986 FBtr0079575 3 1 1 139 2L 8124610 8124631 CGTTCAAATTTCAGGAAACAGC 59 8124731 8124816 CTAGCCCGTCATCATGGAG 60 NA Drosophila melanogaster 61 CG9596 FBgn0031832 FBtr0079332 2 1 1 118 2L 6560668 6560686 AAACGAACCTCAGGAAACC 58 6560508 6560586 CCTTTGCTCCTTCTCTACC 57 NA Drosophila melanogaster 61 Vm26Ac FBgn0086266 FBtr0079240 2 1 1 60 2L 5958423 5958442 GTATCTGAACCGTAGGAGGA 58 5958382 5958402 GTTGTTCTCCACGATTACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS2 FBgn0031639 FBtr0077408 2 1 1 265 2L 4850278 4850353 AATCGTTTGCCAACCTACC 58 4850031 4850049 ATGACCTAATCGACTGCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2976 FBgn0031633 FBtr0077415 3 1 1 101 2L 4829969 4830050 CGCAGCTTTAATCTCTATGACG 59 4829889 4829907 GATCACAAAGAAGCGCTGG 59 NA Drosophila melanogaster 61 CG15440 FBgn0031607 FBtr0077454 3 1 1 93 2L 4454248 4454327 CCTGGAGTCCTACATGACG 59 4454173 4454191 GTACTTGTTGCGCATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31773 FBgn0051773 FBtr0077509 3 1 1 60 2L 3912297 3912316 TCCTGCTGTTTAACAAGGTC 58 3912256 3912279 CTGCGTATAATAGTCAGAAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 1 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 2 3 3 60 2L 823530 823553 GATATGAAGGTCTACATGATGGAG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Clp FBgn0015621 FBtr0078011 2 1 1 67 2L 820400 820418 CACAACAAAGAGTGTCCCT 57 820449 820467 TTGTACCACGGACAATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4164 FBgn0031256 FBtr0078060 3 1 1 215 2L 454089 454107 CAAGCACCTTGATGGACAC 59 454345 454363 TTGATGGAGGATTGGTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416 2 1 4 92 2L 28474 28492 ACCTATCACACGAGTGGAC 58 27480 28418 CAAAGCTGTGAGAAACGGT 58 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 3 4 4 103 2L 1085276 1085294 GTGCATCGGGACATAAAGG 58 1085127 1085210 TGATTGGCACCATTGATGAG 58 NA Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 2 2 2 60 2L 1354589 1354608 GATTCATTCGACTGATGCCC 59 1354548 1354567 ATGTTGAACGCTTTGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918 1 1 2 60 2L 1518156 1518176 GCTTAAATACCAGGACAACCC 59 1518116 1518134 GTTCGCTTTGAGTGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 2 1 1 107 2L 1611792 1611810 CAATGCATCAGATTCGGTG 57 1612018 1612036 CGGTTCAATTCCGATTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718,FBtr0077719 1 2 2 113 2L 2770393 2770472 ATGATAAATGCGTTGCCTTCC 59 2770547 2770565 GATCGGCATCTCCATCCTC 59 NA Nonspecific Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 2 7 7 80 2L 2963121 2963234 CAATCTGTTAAGGTGATTCGTG 57 2963273 2963293 CTCTTCGTAATTCGTCATGGT 58 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 3 2 2 116 2L 2975184 2975204 GTTAATGAAGACACATGCTCC 57 2975017 2975035 CCGTTGTCATGTCATTTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077609 1 1 2 80 2L 3279302 3279322 ACCCATTAATCTGTGGAGGAC 59 3278595 3279261 GATCTGTGGCTGTCATTTCC 59 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 2 3 3 82 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336331 3336350 ATAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 3 4 4 81 2L 3780567 3781913 TGAGGGATCACAGGTATATTCAC 59 3781953 3781972 GTTCTCGATTGGCAGAATCC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 4 5 111 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 1 2 2 80 2L 4840094 4840174 CTTGATTCTAGGTTGGATGGAC 58 4840215 4840233 AGTTTGGCCAATTCTCCAC 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 3 5 8 97 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070167 5070186 GAAGATAGCGCTCTTGAGGA 59 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 3 2 3 92 2L 5071019 5071109 CGTTTCCGGCGTAATACTG 59 5071234 5071252 ATTCCAACCTTCTTGGTGC 58 NA InUTR Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 3 2 5 100 2L 5277169 5277941 TTTCATTGAGCGTTCACTGG 59 5277088 5277106 CGAGTTTGGGTGAAACCTC 58 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 1 1 1 60 2L 6021137 6021155 GCGCAACTTTGGTTATCCC 59 6021228 6021249 GTGTCCATCAATGTAGTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327,FBtr0273250 3 2 4 80 2L 6680519 6680960 ATCAAGTGCACAGTGATGTG 58 6680458 6680478 CCAAGTTCGTATCTGTTCCAC 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079399 1 1 3 145 2L 7050976 7051377 GATGGAAGTTCTATGCGGC 58 7051486 7051504 CATTGTTCTGGGTGAGCAG 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605 1 1 4 139 2L 7536465 7543992 AGAATCTGCTACGTCAGCA 58 7536344 7536362 CTCGAAGAGATCCTGGGTG 59 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079479 2 1 2 199 2L 7711594 7711842 TTTCATCACCGCCTTTCTG 58 7712004 7712023 TGATCACCGAGTAGTAGCAC 59 NA Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 2 2 2 107 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026629 8026647 CCTTGGACGTGAATTTGGC 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 2 8 9 93 2L 8222291 8222309 ATTACCTGGCACTGATGGG 59 8222105 8222235 TCTTCGATGCGTATATCGGG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 1 3 6 84 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 1 4 4 80 2L 9517894 9518001 AGCTCATAAGGTTAACAGCA 57 9518041 9518062 TGTCATTCTCCATATCAGTCAG 57 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 2 4 5 81 2L 9535892 9535998 CACCACTATATCGATCACTCC 57 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 2 3 9 81 2L 9905924 9905942 CAACGTACCTGGCAATCAG 58 9905070 9905881 ACTGTAGTTTAGCTTGGGAGG 59 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 1 2 2 83 2L 10240584 10240690 AAACAACTGATGTGACCGA 57 10240734 10240755 TCTCGAATATACCCATAAGCAG 57 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 3 2 4 89 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264880 10264956 ATTGAATTAACGACGCGCTC 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 2 3 3 85 2L 10324300 10324387 GATATTCCAGGCTTTGCCA 57 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 2 2 2 80 2L 10446357 10446531 TATGTCAAGGATGACGCTG 57 10446574 10446593 TACGGATTCGTTTAGTGTGG 57 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 3 2 2 83 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492701 10492794 CTAATGGACGTCAACTCCCT 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 1 2 2 80 2L 11007423 11007508 ATATTTCCTCGACTACTCGAGTG 59 11007548 11007566 TGTTGCCCATCATGATGGT 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 3 4 4 96 2L 11143221 11143241 TTCGGACTACATACCAACCAC 59 11143079 11143167 CTCACCAATGAAGACATAGATGC 59 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080360 3 1 2 101 2L 12131422 12133101 TTGTGCAGATATCTTTGCACTG 59 12131342 12131360 TATAGGTCAGTAGGCGCCA 59 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 3 5 5 81 2L 13634166 13634247 GTGTTCACCTACAGAGATTTCAC 59 13634288 13634306 AAATTCCACCAGAGGCTCC 59 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996 3 1 3 87 2L 13785900 13785921 CATGCTCTACAACTATTTGGGT 58 13785968 13786221 ACCGATACGGAAATCTAGGA 57 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 2 5 5 80 2L 14195780 14195800 AATGTCATACACATGCTCGAC 58 14189221 14195741 GTACAGGTTCAAGCTCATTAGC 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302731 2 1 5 85 2L 14287774 14287792 AACGGACACTCAAACTCCT 58 14287841 14288161 CAACGCTCACAACGATCTC 59 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0080630 2 1 2 80 2L 14364535 14364556 CTAGTGACAACATCATCAAGGG 58 14364595 14364691 CAGTGGCAGTCCTTATTATGC 59 NA Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 3 2 2 287 2L 14743257 14743275 TAGAACGCTTTCGACAGTG 57 14743599 14743618 TTAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 2 1 1 96 2L 15009507 15009525 GTCATACGAATAGACGGCA 57 15009374 15009394 CAGCATTCATCACATTGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 3 1 1 97 2L 15009507 15009526 AGTCATACGAATAGACGGCA 58 15009374 15009394 CAGCATTCATCACATTGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159 1 1 4 85 2L 15269200 15269387 GAAGGGCATTCAATGCCTC 59 15269133 15269154 TTTCTGTATCTCCTGGATAGCA 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 1 3 4 80 2L 16313443 16314464 TAGACGATACGAAGATGTACGA 58 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 3 3 3 92 2L 16451848 16451867 GATCAAGGATTTGAGTGCCG 59 16451921 16452206 GCATCATAGTACCAGCTGGA 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 1 5 16 80 2L 16769278 16770465 TAAGCTCATCTACACCTACTCC 58 16770506 16770524 CAACGGTTGGTATACACGG 58 NA Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 3 2 2 80 2L 17197081 17251522 CGGCACACTGAAAGATTTCC 59 17197020 17197038 GCGGTACCCTTAATCACGT 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 2 4 12 87 2L 17715906 17716688 GTTGTTATCCACGTGACCG 59 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 2 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128061 18128145 CTTATCCTTGTGCATCTGGTG 59 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0113042 1 1 2 111 2L 18698745 18698844 CATTCAACGCATGGAGAGTG 59 18698916 18698936 CTTCAAGGTGCTATGTTTCCC 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 2 2 3 120 2L 19385701 19386090 GGAGATTTCCAACAAAGTTTGG 58 19385296 19385314 TATAACCTCCACCGTAGCC 58 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268,FBtr0081267 2 2 7 87 2L 19577188 19577208 CAAACGAAGAGCTAAATCCCA 58 19569162 19569183 GGGTTTCTCTACATAGGTATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 3 2 3 108 2L 19581865 19582014 CCAAACAATCGACATGGAGG 59 19581776 19581795 CTTGTGGTTCCACTTAAGGC 59 NA Nonspecific Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 1 2 2 80 2L 20060345 20060422 GCAACTTCAAGATGGCTGG 59 20060283 20060302 CGTCCAAGTAGATGGAGTCC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 3 4 9 140 2L 20876967 20876986 TCAAGTGATAATCTGCCCAC 57 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 3 6 9 96 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882380 20882400 CTGAGTATGTTCTTCACGTCG 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 3 4 9 140 2L 20876967 20876986 TCAAGTGATAATCTGCCCAC 57 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 1 13 13 80 2L 21289504 21289524 TTATACAGCCCAGTCTTGGTC 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0085925 1 1 2 82 2L 21578666 21578756 GGCAAAGTTTACTATCAGACAG 57 21578605 21578623 TCTGAGTATGGACTACGCT 57 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 1 5 5 80 2R 19474 19550 AATCACTTCAGTTGAGGTGG 57 19590 19611 CAGTCTAAATCAAGGAGATCGT 57 NA Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 2 2 2 106 2R 358353 358371 CAGTCTTGGCTGATGTCAG 58 346013 358283 ACTTCTAACACTCGGGTCG 59 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 3 5 5 74 2R 1491753 1491771 ATGATCAAGTTCGCTCCCT 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 3 2 2 80 2R 2126348 2126368 GATTCAGTCACAGCTATACGC 59 2126407 2126500 CCTTTGCATACAACTGTATGGG 59 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 2 3 3 136 2R 2554510 2554590 ATCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 3 3 5 123 2R 2641933 2642214 AGTGAAGCCCACAGTATCC 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084 3 1 59 81 2R 3241193 3249237 GATTGGTCATCACAGAACCC 58 3241131 3241149 ATTCGTTCGATCCAAGAGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 1 2 59 98 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236472 3243203 TTGTACCATCTATAGAAGGGCA 58 NA Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 3 2 2 146 2R 3348875 3348893 AGACATCCGTAGGCAAACC 59 3348692 3348765 AGGCCAGACCATTGTTCTC 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300780 2 1 5 127 2R 3565600 3565621 TAATCAGCAACGAAATCCTCAG 58 3565231 3565514 TAATGTCTCCTCGAATAGCGT 58 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088939 2 1 5 138 2R 3575794 3582607 GAATCGCGACAAAGAAAGC 58 3574433 3574451 CAAATAGACCCTCACGGGA 58 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 1 2 3 83 2R 3592977 3592995 CGATGTTCCAGAAAGGCTG 58 3592854 3592933 TCCACTTTACTGTTTAGACCGT 59 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 1 2 2 117 2R 3803014 3803413 GTTTATAGGCTCCGACTTTCC 58 3802917 3802936 CCTCTTCGTCACTATTCACG 58 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 3 2 2 120 2R 3803019 3803416 AGGGTTTATAGGCTCCGAC 58 3802917 3802936 CCTCTTCGTCACTATTCACG 58 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 2 2 2 80 2R 4285171 4285190 CAACTCCATCTTCCTCACCT 59 4284852 4285128 ACTCCATAGCGTTTGAGGG 59 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 3 2 2 80 2R 4284854 4285130 CTCCCTCAAACGCTATGGA 59 4284792 4284811 TTTATGGTCACCGTGAGGAG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 2 3 12 158 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007268 AACATTACCACCGGATTGC 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 2 3 10 82 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 2 3 3 81 2R 5323910 5323929 TTCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245 1 1 5 120 2R 5395648 5395666 TAACTAGCTCTGGTGTGCG 59 5395750 5397402 CTGCCCATTGCTAAAGGAC 58 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088447 1 2 5 101 2R 5805513 5805531 TCTTAGCGTACTGAGCCAC 59 5805024 5805448 TACTTATCGTGCCCTGGAG 58 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905 2 1 4 85 2R 5877819 5877837 ATACGAGGGACTTTATGCG 57 5877885 5877985 CAGATCTTCACGCTTATCGA 57 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 1 2 3 80 2R 5919133 5919153 CTTGTCTACTGCCTGTATGTG 58 5918913 5919091 ATTTAGCTGTCCTGCACCT 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 3 2 3 80 2R 5919132 5919151 TGTCTACTGCCTGTATGTGG 59 5918911 5919089 GCATTTAGCTGTCCTGCAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 1 3 17 99 2R 6180856 6180874 CTCTTCGTCCAACTCGGAG 59 6180932 6181137 GACTTTGTAGATGACTTCATTGGG 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 3 2 4 141 2R 6359168 6359188 TGACAAGTGTTTCACTGTCTG 58 6358239 6358721 ACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 2 2 2 81 2R 7412684 7412702 AAAGGACAAGACCAACGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA Nonspecific Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 1 2 4 129 2R 7532455 7532918 GTCCCAAACATTCCTAGGC 58 7532261 7532362 TTTGCATACCTGTGCACAG 58 NA Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 1 2 2 80 2R 8309523 8309597 GTGCTAGATGATGCAACCT 57 8309461 8309480 ATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 2 2 8 87 2R 8505016 8505034 GATATTCTGCGTGCTCGAG 58 8505082 8505313 CGACGTCTACCATTCTAAACAC 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302645 1 1 2 111 2R 8622615 8625952 CTGTGATAAGGATGTGTTGGAG 58 8634128 8634146 TTCCTTCTCGAACGTAGGC 59 NA Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 2 2 2 141 2R 8763445 8763624 GGTCTACTTGATATTGATGTGCC 59 8763264 8763283 CATGGTCACGATAAGAACGG 58 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740 1 1 2 171 2R 9110610 9112982 CGAGCACGGACAAATATCC 58 9113116 9113201 ACTGCCCATCTGACTAAAGG 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087704,FBtr0100656 2 2 6 137 2R 9333088 9334647 TCAACATTCTGCACCAGTC 58 9332561 9332579 CTCCAATTCGCGTACAGAG 58 NA Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087647 1 1 2 149 2R 9711418 9711436 TCATCACCATCAGGAGCAG 59 9709053 9711305 TCGATCTCATCTTCGAGCA 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 1 2 2 80 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454669 11454758 AATCCTGATCGATTCAGCCT 59 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 2 3 4 61 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304339 12304357 ATCAATCCCATGATGCCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 3 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 3 2 5 83 2R 12566525 12566547 GGTATCTGGACAACATTTATCCC 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 1 2 2 60 2R 12837674 12837693 TTGTGCAACAATTCCCACAG 59 12837572 12837592 ATGGTCTCTACAGGAGAAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 3 2 9 81 2R 12957456 12957476 GTGTATCGCTTGAGGATAACG 59 12955712 12957417 GAATCAGACCTATTTGAACGACG 59 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 1 5 5 172 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400427 13400445 CTCAGAGTGGGTCAGATCG 59 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 3 3 3 84 2R 13577312 13577390 GATCTTGAGATCCAACGACTC 58 13577435 13577454 GATCTGATGGGTAGGTTCCT 58 NA Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 2 3 3 135 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592683 13593865 TCTCGTTCAAATTCTGCTCG 58 NA Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 2 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 1 2 4 81 2R 13755839 13755857 AGGAGGTGCAATCTGATGG 59 13755049 13755795 TCATCTTCGTCGGAAACTCC 59 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 2 3 6 81 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169009 14169144 CATGTAATACCGTCTCAGCTC 58 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 3 2 3 153 2R 14320266 14325083 GAGGCCTACAAGTTCCAGG 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 2 2 4 105 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528688 14528972 CAATCTTGTATCAGCACCCA 58 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 2 5 5 84 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844995 14845243 ACTGCTAAGACTCTTGTACCTG 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 1 5 5 80 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844990 14845239 CTAAGACTCTTGTACCTGATGTG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 2 5 12 169 2R 15062803 15063700 CAATTCACTTGGACCACGC 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0114605 1 1 6 122 2R 15319889 15320110 GGGAAATCAGGGCATTCAC 58 15319723 15319742 CCTTGAGGTATTGAGCAGGA 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0301882,FBtr0114605 2 2 6 133 2R 15319735 15319817 AGAATTGCTAAGATCCTGCTC 58 15319622 15319640 TCATAGGTCGAGAACTGGA 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 2 3 19 90 2R 15361464 15365132 AGAGACAAATCTGTTCGATCG 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 1 5 19 96 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 2 2 2 91 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198934 16198952 TGATCAGACTAATCCGGCC 59 NA InUTR Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495 2 1 2 63 2R 16439217 16439295 AGCAATGAGATTATGCACCA 57 16439173 16439191 TGTAATCCGAGACCACGTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397 2 1 2 86 2R 16876696 16876715 GCTGATTACTCCATTCTCGA 57 16876251 16876648 CTTCATCTGCTTGTGAACAC 57 NA Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 2 1 1 107 2R 16948474 16948492 GATAGGAAACTGGGCACGT 59 16948618 16948638 ACGGGTATGACTTTCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 1 2 6 125 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286080 17286690 TATGAGCTGTGTTTATGCCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 3 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 3 2 8 80 2R 18618365 18618386 CAATAGCGCCTATATCACTACG 58 18618235 18618329 GACTCGTAACCATTCTTACTAACG 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366 1 1 2 80 2R 18705205 18706428 AAAGTGATGCCCATGAATGG 58 18706468 18706944 TAACTTCACCGAGAAATCTTCG 58 NA Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 2 2 2 155 2R 18728409 18728427 TCGTTCCTGCTCTTTCTCG 59 18728605 18728626 GAAACTGGAGAGTATGTACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 1 8 13 140 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 3 2 2 109 2R 19580461 19580482 ATCTTTCTCGTTCAGAACTCTC 58 19580315 19580392 GGAAGTATTATTGGGCACCT 57 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 1 2 2 80 2R 19946644 19946724 CAAGGACTTACTGTGCACC 58 19946767 19946786 TTGTCCAGAGCAGTATTGGT 59 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 3 2 2 101 2R 19971097 19971185 TCCAGCCTTTGAACTTAAATCC 59 19971247 19971265 TTGATGCCGACATTCTCCT 59 NA Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 1 2 2 80 2R 20017586 20017604 AGACCATCAGCCAGTATGC 59 20017459 20017544 ATCCCGAATAGGTCTTGAGAG 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 3 3 6 123 2R 20281909 20281928 GTTAAGCCAGGACATAGTCG 58 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 2 2 4 80 2R 20443080 20443813 ACACCGATTATGCAAGAAAGAC 59 20443852 20443872 TCCTCTTCGGGTATTAACAGC 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 3 5 9 120 3L 135828 135970 AGTATCTGACAAACGGCCA 59 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 1 3 3 83 3L 201358 201448 GTATTGTCAGACCGTGCAC 59 201495 201513 TTCATCACCTGTTTGGCCA 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072492,FBtr0072493,FBtr0072490,FBtr0100224 2 6 6 63 3L 217666 217684 CTGTTTCCATTCATGCCCG 59 217711 217729 GTTCACGTTATCACTGCCG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 3 5 5 86 3L 245466 245936 GAAGGAAAGGGTACGAGTC 57 245398 245419 GCATATCATCCTCATTATCGGA 57 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299982,FBtr0299984 1 2 10 150 3L 300968 300986 CTGAAAGTACGGATGTGGC 58 301100 301172 ATCATAGGTGCTACTGCCG 59 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 3 4 4 80 3L 344411 344429 GGACATTCAGAACTTTGCG 57 344284 344369 CGTAGGAAGAAGGTGTAAGTC 57 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793 1 1 2 87 3L 1761962 1762133 CAGCATTGTGATCCTTGCC 59 1761893 1761912 TATCTTAGCCACCGTCTCCT 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858,FBtr0110856 3 2 4 110 3L 2124603 2125248 TCTCAATACGGAACCAAATGC 59 2124513 2124531 GACAAACTTGTGACCCTCG 58 NA Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 3 2 2 183 3L 2370044 2370119 TGCTGCTCTTACAAATCGT 57 2369879 2369897 TTCTCCACGCCTTCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 2 3 4 81 3L 3054408 3054428 GCATAGTATTTCGTCTGGTGC 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 2 5 5 82 3L 3310690 3310776 CATTCCTGTCTGTGAAGATGTC 59 3310818 3310837 CAAAGCACCCAAGACTTCTG 59 NA Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 3 1 1 70 3L 3318712 3318736 CTGATATTTGGACACTATGGATTGG 59 3318564 3318582 AATATGGCGGCATTCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 1 7 13 127 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431 2 1 5 141 3L 3754051 3767145 ACAATAACGGAAACTGGTCAC 58 3723842 3723861 TGTTGTGCATCAGTCTTGTC 58 NA Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 1 1 1 122 3L 4089153 4089172 GAAGACGTCCAAACCATCAG 59 4090081 4090099 CTCCGGTCTCAGGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0300621 2 1 2 94 3L 4180798 4180816 CTCAGCTATTGGTACTGCC 57 4180347 4180742 TTAACGATCTCTTCCTTGGTC 57 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 1 3 3 91 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 3 2 4 156 3L 4290903 4290922 GACTTTGGTCAAATCCTGCC 59 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 1 2 2 84 3L 5500640 5500802 ATCATGCAGATCTACCGCA 59 5500574 5500592 TGTAGGTGTTGGGCATCTG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 1 3 10 80 3L 5535644 5535662 ATGAGGGAACCTACACGAG 58 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 3 3 10 82 3L 5535644 5535664 TAATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134 2 1 2 131 3L 5555965 5556198 CATATCACCACCAACAAGAGC 59 5555854 5555872 GATGTTGATACTGCGTGCC 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 2 2 8 80 3L 5669985 5670004 AATTGTTCAACAGGCTTCCA 58 5670046 5697041 CGATCATCGTCCGAAATCTC 58 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 3 3 3 83 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088584 AAAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738 2 1 2 112 3L 8082678 8082696 TTTGAATGGCTCCGATTCG 58 8082524 8082604 CATTGGCAATTGATGAGTTGG 58 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 3 2 2 76 3L 8177588 8177607 TGTCTACTAATGGGCATGCT 58 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 2 4 5 180 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347120 8347138 CTTGTGAGAGTACCAGCGA 59 NA Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 2 2 2 137 3L 8642731 8642817 GCTACAAGCCAACTGTACG 59 8642918 8642936 GAACAATCCATCGGACCAC 58 NA Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 3 2 2 139 3L 8642727 8642813 GCTAGCTACAAGCCAACTG 58 8642916 8642934 ACAATCCATCGGACCACTC 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 2 2 4 107 3L 8960522 8960540 TGAAGAACATCTCGGGCAG 59 8960607 8960678 GGTAGGATTCAGAGTTCTTTGAC 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 2 2 6 60 3L 9043448 9044237 GGAGATGGCAAACAAGACAC 59 9043407 9043425 AACCCTCCTCCAGTTTAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 3 1 1 137 3L 9129859 9129877 CGAACTGCGAAAGGAACTG 59 9129646 9129664 TAATACTTGGCAGCCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 1 2 4 97 3L 9346898 9346919 ATTGGACTGGAACAAGATTCAG 58 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 1 3 3 80 3L 9721525 9721616 GAAGAGAAGATTTACGCTTCAC 57 9721657 9721675 ACATAGGTGAATCCGTCCT 57 NA Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 2 3 3 88 3L 9888967 9889066 ATTGCTTCGGATCATGGTG 58 9888897 9888915 AAATAGTAGGCGGACCTGG 58 NA Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 2 2 2 106 3L 10635606 10635624 CATCTGCTCAAGTGCTGTG 59 10635692 10635814 CGCGTTAAGAACATCATCTCC 59 NA Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 1 2 2 80 3L 11195965 11196052 AGACTTGGAAGAGACAAACCT 59 11195905 11195924 AGAAACTGGTCGAAGAAGGG 59 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 3 4 4 100 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600359 11600377 GCATTGTAGTGTGATCCGC 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983 2 1 3 127 3L 12398256 12401224 GATATGATGGGACGGTACCT 58 12398148 12398166 GAAACTGCTCCAGCTATGC 59 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 2 3 3 89 3L 12788110 12788128 ATTACAAATCCGCCCATCG 58 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 2 3 5 141 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474447 ACCATCTGGGATATACTGGC 58 NA Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 3 2 2 115 3L 14023964 14023983 TCAAGTCCAAGTATCCCAGC 59 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 2 3 3 113 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033096 14033178 CGGCTTGTTAAAGACCTGC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100042,FBtr0100039,FBtr0100040 2 3 6 80 3L 14206287 14223280 ATGACTACGATTATAGGCTGGA 58 14223318 14223339 TCCGATCCTCAGCTATATTCTG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 1 3 4 80 3L 15504256 15505276 AGCTCAAGGATCTGAGCAC 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 2 2 2 82 3L 15551204 15551354 ATCCGGAAGTGACTGTGAC 59 15551400 15551418 AATGGTCGAGTCACCAGTC 59 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 2 4 4 89 3L 15964324 15964402 CCATTCTAGGTCGAGGCTC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 1 2 2 60 3L 16016999 16017019 AAATGGATTAAGCCACAGCAG 59 16022392 16022410 GACTGAACGTGGCTAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 3 3 6 88 3L 16109265 16109284 ATAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 1 2 2 86 3L 16372426 16372444 TGCACTACTTGGTCACCTC 59 16372298 16372378 TGAGGCTATAGAATCCTCCCA 59 NA Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0100145 1 1 2 111 3L 16673994 16674014 CAGAACACGAAGCACATATCG 59 16673024 16673921 CCGATTCATTGCTGCTGTC 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302786 2 1 12 88 3L 16895282 16895487 CAAATCCAATCTGCAAACCT 57 16895537 16895556 TTTCATCCATACGTGGACTG 57 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 2 4 4 80 3L 17008138 17008157 ATACCTTCAAGACCAAGTGC 57 17007995 17008097 CTTTGGCTTGAATGATGACTG 57 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 3 3 4 145 3L 17071248 17071267 TGTGGTAGACAAAGTTTGCG 59 17067480 17070734 TGATGTTATCGTATGCAGAACG 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 3 4 4 84 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391562 17391582 GCCAGAATGGAGTTAGAAAGG 58 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 1 2 2 128 3L 17503756 17503774 CCTGTCCCATCATCTACGG 59 17503862 17504022 CCGTGATTCCTAGGAAATATTGC 59 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075186 1 1 2 83 3L 17723367 17723385 TATCGACCGAAGCTCTGTG 59 17723429 17731747 CAACTCAACCTGTATCGTAGTG 58 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 1 3 3 126 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748797 17748818 GCATAGATCAGCTTAATTCCGA 58 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100567,FBtr0075111 3 2 3 253 3L 18594636 18594654 CTATGCCATGACTGAAGGC 58 18594290 18594371 CGAAATAGTGACCAAGTCCC 58 NA DesignRelaxed Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 2 3 6 82 3L 19685470 19686094 CGAGGTGTACAGATGTACCA 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 1 2 3 110 3L 19881568 19881648 TGAAGCCGAATAACGACGA 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 3 3 4 105 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254040 20254058 AGGTTCTGGAAGATCTGCC 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078187 1 1 5 133 3L 20379947 20381779 GCTTATGTCGATGCCATGG 59 20381876 20381894 AGTAGCGTCGGATATTCCG 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 1 4 4 80 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508475 20508553 AACCATAGCCCGAATCCAG 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0078289 1 1 4 113 3L 21028387 21061820 CGATCTCGATGATAACTTTCCC 58 21061894 21061912 CTATCTGTGCAGGTGGAGG 59 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678 3 2 3 166 3L 21321362 21322909 TGGGCAAGGTCATAATGCT 59 21325732 21325750 CCAGATTTGCAGCTTGACG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 3 3 5 154 3L 21914293 21914311 GATTCGCCAAATATCCGGC 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 2 2 2 144 3L 22056139 22056786 AAGGTTGCATACAGGTCTG 57 22056892 22056912 TCCTCAATGAACTGGTTAACC 58 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 2 2 2 91 3L 22672790 22672870 ATAAGCAGCTGGAGGACAG 59 22672925 22672943 GATGGTCTGGGTGATGACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 3 1 1 109 3L 22680178 22680196 TAGTTGGAGCAAGATGCGT 59 22680022 22680040 GGATGACCTTGAAAGAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 2 4 4 88 3L 22709292 22709406 GTCAGTAAGGATCCAAACCC 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0113191 1 1 3 84 3R 96067 103176 GAAATAGTTGCTTGCACGG 57 96001 96019 TAACAAGGAATTGCTGCCC 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 1 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110933 3 1 19 122 3R 1119477 1119795 AGTATTCTCAAGCTCGCCC 59 1119373 1119391 GAATGAGTCGAATGCGGAG 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 3 3 3 80 3R 1536524 1536545 ATCACCTAGAAATGCTTAACCG 58 1536583 1536671 CAATCGAAGATTGAGCAAACTG 58 NA Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 2 2 2 135 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671325 1671344 GAAGAAGTACGGACTCTCGG 59 NA Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 3 2 2 70 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671261 1671279 AACACCACTGTAGAGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276 2 1 4 89 3R 2565312 2565331 AGTATCCCTGGATGAAGGAG 58 2537658 2552946 CTGGAACGAATTCAGTAATGGA 58 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276 3 1 4 90 3R 2565312 2565332 GAGTATCCCTGGATGAAGGAG 59 2537658 2552947 CTGGAACGAATTCAGTAATGGAG 59 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0300016 1 1 2 106 3R 3077602 3077620 TATCGTACCTGACGATCCG 58 3077231 3077533 CACAAGCTCTAACATACGGT 57 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 3 2 3 200 3R 3785500 3785520 GATCTCAGTTTCCGTCAATCG 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 2 2 2 84 3R 3833666 3833686 GTCAACACCAAGTTCTTAACG 57 3833219 3833620 TTTCCTCATCAGATGCCTG 57 NA Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 2 2 2 97 3R 4478507 4478525 ATATCCGGCGATAGTCGTC 58 4478374 4478392 CTGTAACGATTCCCAGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 1 3 3 138 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499227 TGCCGAACATATCGATGAG 57 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 1 2 4 80 3R 4612642 4618841 TCAAGTTACACCTGAGATAACC 57 4612583 4612601 TCGAGCGCTGATTTATGTG 58 NA Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 2 2 2 60 3R 4600715 4600734 CAATGGCAATTGGAGGACTG 59 4600610 4600695 AATGCCCATCCAAGTAAATCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 3 4 4 93 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871871 4871889 CATTGCTGTATACAGGCGG 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 2 3 5 149 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 2 2 2 80 3R 5081310 5081395 GATATCTAGAGCTTCGTTACGG 58 5081434 5081454 CATTAAGACCCACGGATAGTG 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 2 2 2 164 3R 5566737 5566758 AATGACTCTGGTCTATCGACAG 59 5566939 5566957 CTTCTTGCCATCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 2 2 2 80 3R 6565218 6566919 GACCAAGCACTATTACAATGGA 58 6565159 6565178 GCCATAGAAGTGGGATATCG 57 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 3 2 4 81 3R 6589611 6589632 AACTGTTGCTAATCGATTCAGG 59 6589671 6589890 TGGCGTTGATCTTCTAAATCTG 58 NA Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 1 2 2 136 3R 6680675 6680693 ATGACCTAAAGGTCCTGCG 59 6681052 6681072 TTTCGACATCTCGAAGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 1 2 2 131 3R 7409666 7409686 GCCTACTCGATATACAATCCC 57 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082456,FBtr0082454,FBtr0082452 3 5 6 63 3R 7418095 7418113 AAGATGAACAGTGGCTCGA 59 7416991 7417009 CTACGACCTTGTAGCCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 1 2 2 107 3R 7574585 7574603 CTTGGAGAACGACCAGGAG 59 7574441 7574514 ATCGCATACTGGGAATGGT 58 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0301826 1 1 4 93 3R 7614036 7614191 CCATGATGATCGAGAGTTATTTGG 59 7614243 7614261 GATATGTCTAGCTGCGGCA 59 NA Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 1 1 1 60 3R 7707759 7707778 CTAGACATCAATCTGCTGCC 58 7707664 7707683 TAGGATTCTGACCATTCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 2 2 3 80 3R 7866654 7866732 TAGGTCGTCTTAGGAAAGGT 57 7866773 7866793 TATCTACTCTGTGAGTCTCGT 57 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 1 2 3 80 3R 8228190 8228264 GAGGGCATTGGAAGTTGTG 59 8228308 8228326 GAACTTTCGATCCGTGCTC 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 3 5 5 75 3R 8270796 8270814 CCTACCTCATGGTCACCTC 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 2 2 2 142 3R 8509987 8510006 CTATTTCAAGCGGTACCTGG 58 8509805 8509882 AAACGAGGCTCATTATCCG 57 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 3 5 5 82 3R 8845522 8845622 GAAATACACGAGAAGGTCCT 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 2 4 6 154 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 2 2 3 81 3R 9484277 9484367 TCAACAAGGGTAACCAGGG 59 9484214 9484232 ATATTTCCACCCTGGCCAC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 3 8 8 146 3R 9487574 9487894 GCTTTGTGGAATTCGAAGAC 57 9488068 9488086 CATATCGATCGTCGTAGCG 58 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 3 3 5 82 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522054 9522555 TGTCGTAGTTTGTATCTATCCG 57 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373 1 1 5 85 3R 9892798 9892817 AGATTTACGAGTGGATGGTC 57 9892865 9904973 TTGCAAATCCTTCCATCCG 58 NA DesignRelaxed Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082885 3 1 5 150 3R 9905366 9905964 TATCAACTGCGATGATGGC 58 9906078 9906096 TGTGTTCTGGTAGTCAACG 57 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 3 3 3 96 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551637 10551764 GGCTCCAGATGTTGATCGT 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 4 5 196 3R 11723423 11723506 GGAGCTAAGTGGAAATGCT 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232 2 1 6 80 3R 11903249 11908594 GTCCGTATAATCCTCTTCCG 57 11903188 11903208 TATAATGCGATCTGAGAGCAG 57 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 3 2 9 81 3R 12121527 12122391 GATAGCTATACAATTACTCCACCG 58 12122428 12122449 AAAGTTCTCTGGTTTCACATCC 59 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 1 2 2 60 3R 12260762 12260783 CTGGTCGATGAGTATTATACGA 57 12260864 12260882 AATTAGCAGTCACCTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 1 2 2 80 3R 12805250 12805270 CAACGTTAACGACTCAGTGAC 59 12805119 12805208 CGTTTCAGACTGTCCAGGA 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100377 2 1 7 135 3R 13832727 13832811 CCTATGAGGGCTATGAAGGA 58 13833037 13833057 TGCATATTTACCTGCAGATCC 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 1 3 7 82 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 1 1 1 128 3R 14231127 14231147 GGATCCCATCAAGATTGTCAG 58 14231300 14231318 TAGTTGTCGTTCAGGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0301284 1 1 14 105 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261499 14288993 GGTCAGTGTTGTACCTGCT 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 1 2 4 124 3R 14844197 14846661 GTGAAGAAGGGTATCAACGT 57 14846748 14846766 CAGTGTCCAATAGATGGGC 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110915 2 1 8 103 3R 15352949 15380551 TGAGTCAGGACCTACAATCG 59 15380617 15380635 ATCCTCTTGTGAGGTGAGC 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 3 4 7 98 3R 15593275 15593293 TGTTATATCGCGGATCACC 57 15593354 15600648 TAGAAGGTCTCATCCTCCTC 57 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 2 3 5 80 3R 16367452 16367471 CTTACTACGAGGAGAAGGGT 58 16367265 16367412 TTTGTTCGGACATTATCCTGTC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 1 5 8 86 3R 16624124 16631682 TGAATACGTAGTCGGTAAACGT 59 16631729 16631747 CCTATTAAACCGCTCGGGT 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084072 3 1 22 93 3R 17188587 17200796 ACACAGAGGCTCAAGATCG 59 17188512 17188530 CTCGGACGTCTATGAGCAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 1 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 1 2 5 80 3R 17350302 17350320 GAGACTATACTCGCACCGG 59 17350361 17351259 CCAAATAATAACGATTGGCGGA 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 2 4 4 86 3R 17404341 17404359 AATGAGAGCTGCATCTCCT 58 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 3 5 5 89 3R 17888572 17894845 CATCCAGATTTCAACTTTGTCG 58 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 3 4 4 148 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446567 18446654 GAGTAGTTCATCTTGGTGCTC 58 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 1 2 3 80 3R 19350706 19351232 GTAAGATCTCTGCGGAAAGAG 58 19350646 19350666 TCGATACTTCTGATAGCGACC 59 NA Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 2 1 1 73 3R 19364212 19364230 GTACGTCACATACGAGTGC 58 19364097 19364115 GCGTCAAAGAATTGGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 1 3 3 80 3R 19574387 19574472 CCGACATTATCATCAAATGGCT 59 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 2 2 2 134 3R 19655747 19655912 GGCATTAAGGGTCAAATCTACG 59 19656007 19656025 AATGATGTAGCCATCGGGA 58 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 2 2 2 160 3R 19779096 19779181 GGAATAACGTTGTCCGCTG 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0084631,FBtr0084630 2 2 4 166 3R 20173307 20173396 CTACAATCAAGCTCTCAAACG 57 20173161 20173180 CATAAGAGGACTGCGAAGAC 58 NA Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 1 2 2 80 3R 20459155 20459173 ATATAGCGGAGAGCTCAGC 58 20459216 20459293 ATGGGTCGCATGAATTTCTC 58 NA Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 2 2 2 83 3R 20771733 20771751 TTGGTAGTTATCACCCGGG 58 20771795 20771874 AATGTTGCTCTGATACTTGGTC 58 NA Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 3 2 2 94 3R 20890643 20890661 CCGAATAATACCTGGAGGC 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 2 2 2 91 3R 21305995 21306117 CTCAGAGAATATTACTGCATGATCC 59 21305928 21305946 GTGATTGGGTTGACGAAGC 59 NA Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 1 1 2 80 3R 21419246 21419321 CGAAGTACCTCAAGTTCATGAG 58 21419187 21419205 CTGTGTCACCTTGATTGGC 59 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 2 4 4 80 3R 21448132 21448153 GATCAATATTCAGCCGGATGAG 59 21448013 21448094 ATCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 1 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809929 22810007 TTAAAGATTTGGCTCTCGCTC 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 2 2 12 96 3R 22892108 22892127 CTAAAGAGCACAATCCCTGC 59 22891941 22892049 AATCGCTCGTCTGAAAGGT 59 NA Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 1 2 2 80 3R 23536244 23536339 TTATACAGGAGAGCGAGGC 58 23536380 23536401 TGCGCAGATAATACTTGATGAG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301180 1 1 4 195 3R 24159595 24159613 AAAGTACACAAGGATCGCA 57 24151529 24159436 GTTTGGCCGATATCTTCCA 57 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 1 3 3 109 3R 24168519 24168608 CGAGATACCAGAGGTATCGA 58 24168680 24168698 GATCTTTGCCTCGATCACG 58 NA InUTR Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0301306 2 1 3 106 3R 24518596 24518615 TGCTCTCCATCTACAAGTGC 59 24518682 24518907 GCTTGTCCATCTGAAGTTCAC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 2 4 4 87 3R 24698368 24698446 TCTACAAGGCTCTAACTGCC 59 24698300 24698318 AGGAAGGTCAGAATCGAGC 59 NA Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 1 3 3 102 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951601 24951619 AGATGAGGCGACTATGCAG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 3 9 10 187 3R 24957537 24957856 AGTTCCGAGATCTCAATCCC 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 2 3 3 87 3R 24975219 24975304 CATTTAGACAACCTTTCTGAGGAC 59 24975350 24975368 TGAAGTTCTCGTCCAGCTC 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 3 4 5 84 3R 25857054 25857152 GAGCCATCTACAGATTCTTGC 58 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 2 5 5 81 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871275 25871293 GGGCATCAGATACTGTCCC 59 NA Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089747 2 1 2 61 3R 25999318 25999336 CTTCTCTGTGTTCTCCCAG 57 25999116 25999134 CATCCATGAGTTGGAAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 3 2 2 83 3R 26021215 26021233 GAACTGCTCAAGGATGTGG 58 26021088 26021171 GTACAGCAGGACATAGAATCTC 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 1 4 5 81 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211910 26211928 CTTGATCTCCAGGTCGAGG 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 3 12 12 85 3R 26398249 26398333 AACATTAAGAACATCTCGGACG 58 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 3 10 12 116 3R 26398690 26398708 ACCTGGTGGAGAAGAACTC 58 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 2 6 12 139 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397642 26397662 CAGTATGGTTATCTCCTCGGG 59 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 2 3 4 80 3R 27006535 27006772 ATATACCGAATGTCTACGTGAGG 59 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 3 9 10 90 4 103292 103311 TTTGTCACAATGCTGATCCG 59 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 3 9 10 90 4 103292 103311 TTTGTCACAATGCTGATCCG 59 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 2 4 8 80 4 162686 162706 AATATCCTCTACGCCATTAGC 57 162747 162838 AGATGAACCCAACAAGTCAC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 3 4 7 81 4 261387 261410 TCTAAGGGTCAGTCTATGTATGTC 59 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972 2 1 2 130 4 654365 654383 TGGAGGGCTTTATCACTGC 59 654474 654555 CATGCCACCTTGTGTAATACAG 59 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089971 2 1 2 86 4 654472 654593 ACCTGTATTACACAATTAGCGG 58 654640 654658 GATCCACTCCATAGCACCA 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246 2 1 3 80 4 906429 906449 CAATATTGACAGTATGCCGGA 58 904260 906388 GCCATTGTCTTGAGAACCAG 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 3 6 7 121 4 1081128 1081146 AAAGTTGCGAAGCTAGTCG 58 1080449 1081043 CTGCTTGATGGAACCTGAG 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 2 4 7 148 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079843 1079865 GAAGCTCACTGTATGAAGAACTC 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 2 5 8 94 4 1128963 1129110 TTCCATTGGAACAGGTTCG 58 1129168 1129186 GAGGGACTGTTTGTTCCTG 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100346 1 1 8 82 4 1128897 1128918 GCTTTACGACAGTATTACAACG 57 1128961 1129114 TAAGCGAACCAATGGAAGG 57 NA Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 1 2 2 80 4 1164123 1164144 CAACATATAGGGATCCCTTCAC 58 1161983 1164083 TCATTCGTAATGATCCCAGC 57 NA Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 3 2 2 80 4 1216413 1216483 AAAGCAATACCATCCGTACG 58 1216352 1216373 ACAGTGATACGATACATTCCCA 59 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 1 1 3 74 4 996159 996177 TATAAAGTAAGTGCCGGCC 57 997415 997436 TCGATACTGACAGTATGTACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 1 4 4 99 U 1179119 1179137 ATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 SteXh:CG42398 FBgn0259817 FBtr0300105 3 1 1 60 U 6621537 6621555 AGTGAACTGGCAACATGTC 58 6621636 6621654 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 3 2 3 81 X 31080 31099 CCATATTACGCACCATTTCG 57 31143 32455 GCCGAAACTAAGTTCTTGC 57 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 1 3 3 155 X 927433 935032 ATATGAGTATCCTCCGAGCAC 59 935149 935167 GTTTCGCACATTGTAGGGC 59 NA InUTR Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334 2 1 7 89 X 1965610 1965887 TTGTTGTGGAGAGTGGTGG 59 1965539 1965557 TTGCGTATCCTCAGAAGGC 59 NA InUTR Drosophila melanogaster 61 csw FBgn0000382 FBtr0070379 3 1 3 95 X 1997800 2002424 TGGTTACACATGGTTTCATGG 58 2002481 2002499 GATTCACGGACGAGAAACG 59 NA Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 2 3 3 80 X 2003619 2003766 GCAACATATTGCCATACGAC 57 2003809 2003827 CATTGATGTACTCGGCTCC 58 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528 1 1 3 80 X 2340493 2340511 TCAACGGAGTGATTCCGAG 59 2340217 2340451 GGAACATTGGACTCTTATCGG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 CG32789 FBgn0260484 FBtr0070600 1 1 1 74 X 3694472 3694490 ATATACTGGGCGCCATGTC 59 3694601 3694620 TGATGTTACCCGGATTTGAC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632 1 1 3 80 X 3759462 3760543 TGAGTCTTCCACCCATTCC 59 3759400 3759420 CATAGTAGTTGAATCGCTCGC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 3 4 4 98 X 3846169 3846187 CTGAGAGTCTGGACTTGCT 58 3846246 3846812 GTGTGATTTGATCCTTCAAGTG 58 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 2 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016107 TCTAGCTGTCGAGTAGTCG 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 1 4 4 152 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 1 3 3 91 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654771 5654792 ATGTATAACTCCATCTCCTCGA 58 NA Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 1 2 2 147 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425332 6425350 TGTTATCGACGGTGGTCAG 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 2 3 6 106 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680750 6680768 CAATCTCCGAATTGCTGCT 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071119 2 1 6 102 X 7937755 7937949 TCACAAATGTCCAATATGCTGG 59 7937674 7937692 CACCACCAAAGTTGCTACC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 1 4 6 83 X 8478541 8478559 GGAGATCCAGTCGATCGAG 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112753 3 2 3 150 X 9222619 9226496 CAGTGCGAAGATCTAACCC 58 9222487 9222505 AGACCACTGGTGTATTCGT 58 NA Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 2 2 2 184 X 9823081 9823213 ACTCTTCGCTGTTCTTCGA 59 9822915 9822933 TCCGGTCCAGTATTTCACC 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 2 2 3 95 X 10640006 10640118 CTCACCTACAACGACTTTCTC 58 10640175 10640193 CAATGTCAGCGACTTGGTC 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073489 2 1 15 86 X 11293775 11293793 CCAATGGAGTTGTGAGCAG 58 11293843 11294832 AAAGCATAAAGGGTTGCGG 59 NA Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 3 2 2 81 X 12837476 12837559 TATTTCTGGTCTATCGAAGGGT 58 12837601 12837619 ATTCAACTCCTGGATGGCT 58 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 2 2 2 246 X 13502355 13502442 AAACTAGCACAAACCATGCA 58 13502648 13502669 TCTGGAATGTAACTGAGATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 2 2 2 153 X 13890549 13892140 GTTACGATCTCAACGAGAAGG 58 13892255 13892273 GGAATGGCATTGATCCCAG 58 NA InUTR Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 3 2 3 113 X 14474871 14475007 GATCACCGATTCGACATGC 59 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA InUTR Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 2 2 4 125 X 14726981 14727182 AGTAATCCGAACGACAGCA 59 14727268 14727289 CATTATTTAGTCGGTGGTACGT 58 NA InUTR Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 3 2 4 263 X 14726731 14726749 GAATTGTGGCGACCAAGTG 59 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 1 2 2 107 X 15200611 15204427 ATCTGGAGAACATGGAGGG 58 15204496 15204516 CAAAGTAGGGAATGTCTTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 2 4 4 81 X 15230530 15230550 CTGATCATCGACTACGATGTG 58 15230592 15230664 TGGAGAAGTAAACCACCCTG 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 1 2 5 92 X 15272250 15272268 CCTATCGAAGTTCGGAGCA 59 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042 1 1 2 124 X 15381497 15381580 AAGGATCGTGAGATAGCCG 59 15397616 15397635 ACATTGGGCTCTTCATTCTG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074109 2 1 6 89 X 15754281 15754302 CGTGTAAGTAACGTATTGTCGT 58 15754346 15755199 GTGTATTTCAGACCTCATAGATCAG 59 NA InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 2 4 4 80 X 15975870 15975889 CAAATGAACTTTCCGTGTGG 58 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988 3 1 4 94 X 16190815 16191704 TTTATGGTGCCGATTCACAC 59 16191758 16191779 TCCATTTGTGACTTTGGATACG 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 1 3 3 82 X 16258620 16258638 GGAGTATGCACGCTATGAG 57 16259258 16259276 ATTTCTTGCGCTCGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 2 3 3 98 X 16494338 16494422 AGCAACAACTCCATCATGG 58 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074369 3 1 7 286 X 16588401 16588668 AGCACTAGATAAGCATGTTGTC 58 16588136 16588154 TCATCGTGCTTATGACGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 2 5 5 89 X 16719516 16719535 GGATCTGGATGGTACTTCGA 58 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 2 4 6 87 X 17165361 17165379 ATCACGGAGCCAAATTGTC 58 17165430 17165531 ACATTCAGGCACTCAACCT 59 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 1 4 4 229 X 17198190 17198208 CAAGTGAATGCTCAGCAGC 59 17198401 17198746 ATCATCCAAATGGCATCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074431 1 1 2 141 X 17317882 17320139 TAGATGCTCCCAACTGGAG 58 17320244 17320262 GTCCAGATAGACGGGTGTC 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300977 3 1 6 81 X 17794789 17794809 GATCAAAGTGGACGAGTTCAC 59 17794850 17798651 AGTACGAATCTGGGTGAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 2 2 2 85 X 18374511 18374586 TGAATGTGACCAATCGTGC 58 18374444 18374462 AAAGGATGCATTGCACTCG 59 NA Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 2 1 2 79 X 18642098 18642117 GTTCATGGGAGAAGATTGCC 59 18641945 18641963 TCGATCAACGTAGTAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 2 2 2 199 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18802347 18802365 AGAAGTAGCGCGAGATGTC 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 3 4 4 80 X 19236628 19236774 CTGATGTACAACAGTGCCG 58 19236566 19236585 CAGACAGCTCCCATTATTGC 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718,FBtr0074719 3 2 8 237 X 19398495 19398513 TGCGATTCGTTGTGTTCTC 58 19400657 19400677 ATGTTCCTACTTGATCCTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302859,FBtr0302861,FBtr0302860 1 3 6 172 X 19418033 19418052 AATCCATAGCCAGTTTGGTC 58 19418186 19419220 GGCGATTATCTTGTCATCGT 58 NA Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 1 1 1 80 X 19600128 19600146 AACGATCCTCGTCTCAAGG 59 19600252 19600270 CACTTGGTCATATTCGGCA 57 NA DesignNoJunction Drosophila melanogaster 61 sw FBgn0003654 FBtr0089397 1 1 13 197 X 20101685 20104511 CTACGGATTATTATGTGCTTGC 57 20101131 20101527 CGTTGACCTCCTTCTTCAC 58 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 3 5 5 80 X 21227988 21228077 CTATCTGACCAAGGGCTGG 59 21228119 21228139 TCACATTTCACATGGATCCAC 58 NA Drosophila melanogaster 61 snoRNA:Me18S-C1831 FBgn0065053 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:H:56E FBgn0011879 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30206 FBgn0050206 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:57BCa FBgn0011871 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32449 FBgn0052449 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A2634c FBgn0082944 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31575 FBgn0051575 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G2017 FBgn0086057 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A1374 FBgn0065080 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-13a FBgn0046830 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:204 FBgn0065101 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 pncr004:X FBgn0047095 FBtr0091949 1 1 1 90 X 19068648 19068666 GAAGAGTCCCACTTCCGAG 59 19065305 19068598 CAATTATCGAGGGTATCTTGGTG 59 NA Drosophila melanogaster 61 CG14614 FBgn0031186 FBtr0077368 3 1 1 81 X 21856022 21856246 GAATTTAGTGCTAAGAGCACCT 58 21855962 21855981 GATAGACACCCTTGGAGTCC 59 NA Drosophila melanogaster 61 CG11229 FBgn0031138 FBtr0077282 3 1 1 60 X 20782739 20782757 AAGGACGTAGGCGAATCTC 59 20782779 20782799 GCTGATGGAGAAACATTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mec2 FBgn0030993 FBtr0074669 2 1 1 117 X 19083571 19083682 GCGTTGAGATCAAGGATGTC 59 19083762 19083780 GACTTCTTCTCACCCTCGG 59 NA Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722,FBtr0112723 3 2 2 256 X 18738062 18738538 AAGATGCAGCAAATGGACG 59 18738758 18738776 GTAATGGTAGCCTCCACGA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7101 FBgn0030963 FBtr0074639 1 1 1 142 X 18725050 18725068 TTCTACTGCGACATGTGCA 59 18725174 18725271 TCATCAACCTGGCTGTCTG 59 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593,FBtr0074594 1 2 2 92 X 18413275 18413354 AAGTTGGATAAGTCGCCCT 58 18413410 18413428 GTACTCGCCAATTCGATCC 58 NA Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074569 1 1 2 68 X 18330824 18331042 TTTCATCCCAAACTCCCAC 57 18330774 18330792 AGTACACGGCAGGATACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15057 FBgn0030908 FBtr0074582 2 1 1 68 X 18166930 18166948 ATACTGGTGCTGGATGGTG 59 18166880 18166898 CAGTCGAACCGGATTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 3 2 7 200 X 18007410 18007494 AAGAAGAAACTCAGGTTGCT 57 18004576 18004594 CTTATCGCCCTCCAAACTG 58 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487 2 1 2 97 X 17518225 17519570 TACGTATTCCTGCAAACATTCG 59 17518149 17518167 CATATGAGGAACAGGGCGA 59 NA Drosophila melanogaster 61 CG13001 FBgn0030806 FBtr0074417 3 1 1 67 X 16836288 16836306 GTGTACGAGGAGTACCTGG 58 16836239 16836258 CTTAGTCCGAGATAGTCGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 1 2 2 82 X 16605541 16605562 GAGCTATCAAGATATGTTCGGA 57 16605605 16605697 GTCCAGAGAACCGAAACTC 57 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298,FBtr0290121,FBtr0111023 2 4 4 80 X 16407798 16407818 ATCATCACCACAATTCTCGTC 58 16403728 16407758 GAATATCACCTCAGTGGACTC 57 NA Drosophila melanogaster 61 U2af50 FBgn0005411 FBtr0074234 3 1 1 85 X 16251439 16251524 ACGATCAGGTTAAGGAACTG 57 16251373 16251391 CTTACTCAACCCAGTAGCG 57 NA Drosophila melanogaster 61 Cyp1 FBgn0004432 FBtr0074238 1 1 1 145 X 16214163 16214181 GAGTACTTTGCCTAGGGTG 57 16212565 16212583 TGTACCCGAATCCCTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 tay FBgn0260938 FBtr0074167 3 1 1 80 X 15774250 15774336 CAGCACTGTGGTTAAACTCTC 59 15774190 15774211 CACTACCACTCGATACTATGGG 59 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112,FBtr0074113 2 2 2 60 X 15763265 15763283 GCTAAACGACAAGTTCGTG 57 15763307 15763325 GTTGGAGTAGCCAAACTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 1 5 5 167 X 15688455 15688539 AAGATCCACGTAACAAAGTTCC 59 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191 2 1 2 94 X 15679299 15679320 TGTTTATGCTAGCGACTATCAG 58 15679154 15679246 TTCCTATTCCGGATACTTGGG 59 NA InUTR Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 2 2 5 87 X 15271621 15272237 CATGCCAAATCCATCTATTCAC 57 15266203 15266223 CGAATTGCATAATAGGGAAGC 57 NA Drosophila melanogaster 61 CG15028 FBgn0030618 FBtr0112985 1 1 2 151 X 15075224 15075242 ATATGACAGTGGGTCTGGA 57 15075355 15075452 TAAAGAATCCGTCGTAGTCAG 57 NA Drosophila melanogaster 61 CG9072 FBgn0030614 FBtr0074029 2 1 1 60 X 14989855 14989874 AGCAACTGATTGTCTATCGG 57 14989814 14989834 TCATAGTGATCCTTCTGTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9512 FBgn0030593 FBtr0073979 2 1 1 61 X 14796971 14798009 CTGTTGCTTTCAGGCATCG 59 14796928 14796946 AGTTTCACGGGAATTCCCA 59 NA DesignRelaxed Drosophila melanogaster 61 Ag5r2 FBgn0020508 FBtr0073938 2 1 1 107 X 14677275 14677535 GGATATAACGGACCTGCCA 59 14677186 14677204 CACTTGGTTCCATCCATCG 58 NA Drosophila melanogaster 61 CG32601 FBgn0052601 FBtr0073914 1 1 1 128 X 14272911 14272930 TTCATTTGCAAAGCACAGAG 57 14273075 14273093 ATTTCTCTTGTGCTTGCGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 2 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073764 2 1 2 111 X 13224554 13225159 ATCTGGAAGTCAAGGATGCC 59 13225233 13225251 ATTTGCCCTTGTAGTCGCT 59 NA InUTR Drosophila melanogaster 61 CG4351 FBgn0030448 FBtr0073746 3 1 1 98 X 12992407 12992478 TACTCCAAGCACCATCTGG 59 12992327 12992350 GAGAATCTTGTTCGATATACTCCC 58 NA Drosophila melanogaster 61 CG32662 FBgn0052662 FBtr0073564 2 1 1 60 X 11726183 11726204 ATACATTACCCTGGATACGCTG 59 11726220 11726243 GGATGAGTTATTCGATGTAGAGGT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)10Bb FBgn0001491 FBtr0073460 3 1 1 83 X 11219150 11219169 TGATCGAACCAACTCTCGAG 59 11219005 11219023 ATTCCGTAATGCGTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 1 2 3 166 X 10986859 10986994 TTTCCACCTGAGACAGCTG 59 10987124 10987142 GCGAAAGGTGTATTCTCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 3 4 4 118 X 10676327 10676424 AAGTACAAGCAGGTCTTCC 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 CG12644 FBgn0040940 FBtr0071434 3 1 1 61 X 10052888 10052907 TCCAAGACAATGTCATTGGC 58 10052931 10052949 AGGGTTACCAACGCTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 3 2 2 218 X 10017033 10017051 CGTCCAGGAAAGTTCATCG 58 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 2 2 2 217 X 10017034 10017052 GTCCAGGAAAGTTCATCGC 58 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 3 3 3 88 X 9955306 9955324 GCAATGTGAGCATACCGTG 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 2 2 2 96 X 9857825 9857845 CATTCGATCAGGATAACGACG 59 9857689 9857767 AACAAGTTGCTCTCGAAGC 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 1 4 4 80 X 9674917 9675201 GCCCATGATATTGAGGCCT 59 9675245 9675263 CTTGTCCGAAAGGTTCACC 58 NA Drosophila melanogaster 61 Ir8a FBgn0052704 FBtr0071333 2 1 1 80 X 9128777 9128866 TGGATTTACGATGCAACGTG 59 9128716 9128735 GGATAACCTGGACTCACCTG 59 NA Drosophila melanogaster 61 Obp8a FBgn0030103 FBtr0071307 1 1 1 207 X 9108942 9108960 CACAGATCGGTTTGCTCAG 58 9109358 9109376 AGATAGTGACGCACATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12112 FBgn0030048 FBtr0071233 1 1 1 80 X 8453730 8453753 CAATTATGTATGAGGAGGATCTGG 58 8453600 8453694 GCATGGAATTCGTATAGATCCC 58 NA Drosophila melanogaster 61 CG12123 FBgn0030039 FBtr0071245 3 1 1 217 X 8335879 8335897 TACAAATTCGCCGACATGC 59 8335622 8335640 CTGTAGTAGAGCTTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Or7a FBgn0030016 FBtr0071186 3 1 1 82 X 8058363 8058587 GTACTTCAGTATAGCCAAGTTCTC 58 8058304 8058322 TTGTCCTGTTGAATCGCTC 58 NA Drosophila melanogaster 61 CG15333 FBgn0029989 FBtr0071124 1 1 1 60 X 7915268 7915288 GTGCATCGTGATAAAGATCAG 57 7915228 7915248 CCAGATAGGGCAAGTAATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071136,FBtr0071135 1 2 2 123 X 7794913 7794931 ATATCCTCGGTGACGAGTG 58 7794295 7794313 CCCTTCTTCAGGAGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33664 FBgn0053664 FBtr0302417 1 1 1 80 X 6278304 6278383 GATTCTTGACTACTCCGAAGC 58 6278424 6278443 TTCTTAGAACGGGAAAGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6067 FBgn0029828 FBtr0070864 2 1 1 153 X 5849897 5851093 AATGCAAACGACCTACACC 58 5851210 5851228 TTCCAAGGTCAACAGTCGT 59 NA Drosophila melanogaster 61 CG32755 FBgn0052755 FBtr0070862 3 1 1 133 X 5844899 5844917 ACTGCTCTTTCTCAACGGA 59 5845012 5845087 ATTTCTCCTTCATGGTGACCT 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 3 2 2 122 X 5604994 5605518 ATATTTCTGATCGGCTATGCCT 59 5604893 5604911 CTTGTCCTCGTGACTCAGG 59 NA Drosophila melanogaster 61 Tre FBgn0003747 FBtr0070802 3 1 1 86 X 5575441 5575528 GTTTCACTGATGGAACACCTG 59 5575576 5575594 ATAGGATTCCACGGGATCG 58 NA Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299601 2 1 2 69 X 4676732 4676805 AATCAAACCGAAGCTATGGC 59 4676682 4676700 GCATTCGACTACAGTTGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 3 2 2 178 X 4528060 4528080 GGATCTAGGAATCGATTTGCT 57 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301823,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 7 7 87 X 3593051 3593155 ATAGTAATGGAGCGGGCAC 59 3593205 3593224 TTGAGCAGGTCATAGCACTC 59 NA Drosophila melanogaster 61 ng4 FBgn0010296 FBtr0070538 2 1 1 60 X 3138131 3138149 TTTACGGAGCCTGATGTCG 59 3138089 3138107 AATCGATGTAGTCCTCGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2709 FBgn0024977 FBtr0070486 3 1 1 205 X 2621217 2621235 TACATTAAGGCGGAAGTCG 57 2621467 2621486 ATGAAGCTGGTGATTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 fs(1)Yb FBgn0000928 FBtr0070484 3 1 1 115 X 2617525 2617613 TCTTCAAGGATTCACCCAGAG 59 2617690 2617708 AAAGAAATCCTTGCGCACC 59 NA Drosophila melanogaster 61 tko FBgn0003714 FBtr0070459 3 1 1 121 X 2337851 2337869 CGGCTGGTACTACAAACTG 58 2336747 2336765 TCATAGCTGCACTGGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp4ae1 FBgn0015036 FBtr0070388 1 1 1 80 X 2073233 2073252 CAAGTGTTTCGAGAGTTCCT 57 2073292 2073367 CGAACTTATCATGCAAGTTGTC 58 NA Drosophila melanogaster 61 CG4045 FBgn0025629 FBtr0070331 2 1 1 168 X 1969645 1969713 CAGCTTCGACTATCCTGCT 59 1969495 1969513 GATTTCCATGCCGATGGAC 59 NA Drosophila melanogaster 61 a6 FBgn0023130 FBtr0070279 2 1 1 197 X 1589741 1589759 GCTCCTCTCAAGGAAATCC 57 1589497 1589580 CTGGTTCATGTCGAGTGTG 58 NA InUTR Drosophila melanogaster 61 CG11380 FBgn0040359 FBtr0070201 2 1 1 111 X 1085739 1088244 TAATATTGGGCACTCTTAGTGC 58 1088316 1088334 TTCTTCAGGGTGGTAACCT 57 NA Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 3 1 1 133 X 1056327 1056346 CGGTATTCGGATATTCGCAG 58 1054060 1054078 CATTGTTGTTCGCACAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14628 FBgn0040365 FBtr0070180 3 1 1 60 X 1039734 1039753 AATTGAACTCACCAGTGGAC 58 1039776 1039794 CGGAAGGTTTCTCACAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14628 FBgn0040365 FBtr0070180 2 1 1 60 X 1040062 1040083 TACGATGATTACTCCGAAAGTG 58 1040100 1040122 CATTATACAGTTGCATGTCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 3 8 8 87 X 396179 396197 TAGCAAACCGTTTGTGCTC 59 396248 396332 CTCATTGTGAGCCAAGGAG 58 NA Drosophila melanogaster 61 CG40530 FBgn0085494 FBtr0302228 2 1 1 94 U 8029859 8029934 TATTCTGCGCAACCATTGG 58 8029783 8029801 TCAGAGTGCATTCTGTGCT 59 NA Drosophila melanogaster 61 CG41497 FBgn0085658 FBtr0114103 2 1 1 60 U 1683933 1683951 CATCAATTTGGTTGGCAGG 57 1683891 1683910 TGTTGCATGATAGCTGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11231 FBgn0039939 FBtr0089242 3 1 1 60 4 820203 820221 ATCTGTAACGCGTTCAACG 59 820244 820263 TAAAGGCCCTTAGTGACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11231 FBgn0039939 FBtr0089242 1 1 1 60 4 820362 820381 GTTCTAAGCCTTGCTCTTCC 58 820404 820422 TGATAGCTGTGTTTGCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 2 6 6 80 4 302506 302581 TATGTCAGGTTGACTTTGCTG 58 302446 302466 GAAGTTCTCCGCATTTATCCT 58 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 1 7 7 93 4 258101 258120 AGAGCTCGACTTACACAGTC 59 258176 260948 AGCGGATTCTTTACTGGCT 59 NA Drosophila melanogaster 61 snRNA:U1:95Ca FBgn0004185 FBtr0084528 1 1 1 75 3R 19685314 19685332 TTAACCGTGATCACGAAGG 57 19685257 19685275 ATCGCAGAGGTCAACTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 3 2 3 60 3R 17123343 17123362 TAACTGGTGTTTATCAGCGG 58 17123384 17123403 TCAATAGAAGCGACAGGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 1 2 2 94 3R 27815039 27815114 ATTCCTAAGACGGTGCCAC 59 27815172 27815190 ACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 1 3 3 80 3R 27659963 27659981 TTTGCGAGACGAGGATCTG 59 27660025 27660106 CGACCATCTCCTGTACGTC 59 NA Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847 3 1 2 92 3R 27631321 27631342 CGACAATAATTCAGCATCAGAG 57 27631521 27631540 TATAAGCTGAGTTGACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847 2 1 2 92 3R 27631320 27631340 CCGACAATAATTCAGCATCAG 57 27631521 27631539 ATAAGCTGAGTTGACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Ir100a FBgn0039879 FBtr0085846 2 1 1 60 3R 27627814 27627832 TCTTTGTGGCTTCTCTGTG 57 27627856 27627874 AGACTGGACTCAAGCAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 1 6 6 84 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 l(3)03670 FBgn0010808 FBtr0085745 2 1 1 151 3R 26879316 26879334 ACTGAAGGCGGGAATATCC 59 26878904 26878924 CGGGATAGGAGGATACTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)03670 FBgn0010808 FBtr0085745 1 1 1 150 3R 26879316 26879334 ACTGAAGGCGGGAATATCC 59 26878905 26878925 GGGATAGGAGGATACTTTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33483 FBgn0053483 FBtr0089295 3 1 1 81 3R 26727040 26727116 CCTTTCTCTGATCACAGAAATAGC 59 26726982 26727003 ATCATCAAACGCTTTATCCCAG 59 NA Drosophila melanogaster 61 CG33483 FBgn0053483 FBtr0089295 1 1 1 80 3R 26727039 26727115 CTTTCTCTGATCACAGAAATAGCC 59 26726982 26727003 ATCATCAAACGCTTTATCCCAG 59 NA Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721,FBtr0085722 3 2 2 60 3R 26571900 26571922 GCTGAGATAGTCAACTTTCAGAC 59 26571862 26571880 CCTGACTAATCGAGCAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9698 FBgn0039784 FBtr0085657 1 1 1 82 3R 26341142 26341218 GAGTGGATTATGGCACCCA 59 26341264 26341282 CAAACGTGGATGCTGATCC 59 NA Drosophila melanogaster 61 capa FBgn0039722 FBtr0085514 3 1 1 146 3R 25739319 25739929 ATTCAGTACAGCTGAGACGG 59 25739192 25739210 TAAATGCCGTCGAGGACTC 59 NA Drosophila melanogaster 61 CG15515 FBgn0039719 FBtr0085500 3 1 1 126 3R 25731745 25731764 CTTCTGGACTACGTCTTCCC 59 25731910 25731928 TCATGATCACGCCCATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp99b FBgn0039685 FBtr0085462 3 1 1 70 3R 25542475 25542493 TTCTCCTATTGGGTCTGGC 58 25542423 25542441 CGTCTTCACCACATAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11501 FBgn0039666 FBtr0085426 3 1 1 67 3R 25319820 25319838 GGATCGTGCAACATCTTCG 59 25319869 25319887 AATTCCTGTGACCAATCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11843 FBgn0039630 FBtr0085363 1 1 1 80 3R 24881126 24881218 CTACGGAAATTGGGTGTGC 59 24881262 24881280 AGCTGGTTGTTTCCATCGA 59 NA Drosophila melanogaster 61 CG11837 FBgn0039627 FBtr0085360 3 1 1 81 3R 24876084 24876102 CCTTTAAGGTGACGTCCGT 59 24876146 24876229 TCTTCAATCGGCTCATTCCT 59 NA Drosophila melanogaster 61 CG9988 FBgn0039591 FBtr0085305 1 1 1 80 3R 24462950 24463026 ACAATAAGATAGGCGACAACAC 58 24463067 24463085 CCTTCTTAATGGCCGACTC 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 2 4 4 97 3R 24150590 24151219 CAACCACTGTTGATGCCAG 59 24150351 24150369 AACGTTGCTAAAGTCGCTG 59 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564,FBtr0300606,FBtr0300607 3 3 3 104 3R 24027967 24052465 GGAGAAATATCAGACTGCAGAG 58 24060808 24060826 ATTCATTGCAGTGATGGCG 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582,FBtr0112583 3 3 3 134 3R 23904347 23908636 GAGTAAAGAGAACATCAAGCCG 59 23908731 23908749 AAGGTCTTCTGGAGGACCT 59 NA Drosophila melanogaster 61 CG31054 FBgn0051054 FBtr0085256 1 1 1 126 3R 23786840 23786858 GTATTTATGGGCAACCCGA 57 23787008 23787026 TAGTAGCGTTTGTCCTCGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG5934 FBgn0039505 FBtr0085158 3 1 1 250 3R 23099599 23099694 ATCCACAGGTGGTCATTCC 59 23099908 23099926 TTCCTCCTTGACGGAATCG 59 NA DesignRelaxed Drosophila melanogaster 61 DNApol-alpha73 FBgn0005696 FBtr0114543 1 1 1 60 3R 23066102 23066120 TACGGACAGTACGGATCTC 58 23066142 23066162 ATCCTTGAGGTACTTGAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14247 FBgn0039454 FBtr0085043 1 1 1 60 3R 22563960 22563978 CCCAGCATAAATGCCACAC 59 22564002 22564020 TGGACACGAATCCACTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 1 3 3 82 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293938 AAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG6036 FBgn0039421 FBtr0085027 2 1 1 60 3R 22170560 22170579 ATGATGGCTCAAAGTCTCCT 58 22170519 22170543 CAAACTATTATATCAGGTTCCGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 1 1 1 139 3R 21885469 21885541 AAATATCATCGGCGTGGAG 57 21885643 21885662 TCATACTAATATCCGGCGTG 57 NA DesignNoJunction Drosophila melanogaster 61 And FBgn0011273 FBtr0084904 2 1 2 128 3R 21638786 21638806 TTCGTATGGATGATAAGCCAG 57 21638896 21638914 GTTAGACCGCAGAGAAGTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG31093 FBgn0051093 FBtr0084917 2 1 1 99 3R 21616050 21616139 CTCTTTCGCTATAGTGATCGAG 58 21615972 21615990 TAACGGTCGATTGCAACTG 58 NA Drosophila melanogaster 61 CG31093 FBgn0051093 FBtr0084917 1 1 1 90 3R 21616050 21616139 CTCTTTCGCTATAGTGATCGAG 58 21615981 21615999 ATTGCAACTGTTTGTGCTG 57 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113384,FBtr0084928,FBtr0113388,FBtr0113385,FBtr0084927 2 7 7 80 3R 21527288 21527308 ATTACGTCGAAATAGCCTTGC 59 21527159 21527249 GGTATACGACATAGATGACGCT 59 NA Drosophila melanogaster 61 CG11913 FBgn0039331 FBtr0273265 3 1 1 71 3R 21184208 21184279 CATCAAACAAAGAAGATTGCCC 58 21184311 21184329 GATACAGCTCATCCCAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 rha FBgn0027376 FBtr0084832 1 1 1 80 3R 21167295 21167379 GAACGGCTATAGCTCATTACC 58 21167421 21167439 TGTACTTTCGGTTGTCGGA 59 NA Drosophila melanogaster 61 CG31099 FBgn0051099 FBtr0084856 3 1 1 89 3R 21135664 21135745 TCAAATATGGATCTCCTGCCA 59 21135595 21135614 CCATATTGTCAAACTGGGCT 58 NA Drosophila melanogaster 61 Aats-gln FBgn0027090 FBtr0084866 2 1 1 60 3R 21089955 21089975 CAACGCTTTGGGTATCTACTG 59 21089915 21089935 GTAGTTCATGTTCAGCCTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mocs2 FBgn0039280 FBtr0084782 3 1 1 80 3R 20951605 20951626 TCAGTAGAATCAAACGAGTGGA 59 20951487 20951565 CACGTTTGGTGAAGTGTCTG 59 NA Nonspecific Drosophila melanogaster 61 CG11781 FBgn0039259 FBtr0084797 2 1 1 125 3R 20850560 20850578 TATCCGCCGTGGAATACTG 59 20850397 20850415 GAATCCAGAGCACGAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31125 FBgn0051125 FBtr0084665 3 1 1 60 3R 20479959 20479977 AAAGTTCCCTAGCCTGCTG 59 20479917 20479935 ACTATCGAAGCTGTGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 2 2 2 81 3R 20459212 20459289 GTGGGAGAAATTCATGCGAC 59 20459333 20459351 CATTTCGGTCGCATGAGTG 59 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 CG13613 FBgn0039193 FBtr0113278 2 1 1 111 3R 20191768 20191922 TTCCTGCTCACACCATCTC 59 20191996 20192015 ATAGATGACACTGACCACCG 59 NA Drosophila melanogaster 61 CG17784 FBgn0039192 FBtr0084626 3 1 1 80 3R 20190534 20190552 AACAGCAGTCTTACCTCCT 57 20190404 20190493 GCTAGGTACTAACTTGACAACG 58 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530,FBtr0084602 3 2 2 83 3R 20116540 20116560 AAGATACGAGAACTGTTCCAC 57 20116605 20116680 GATATCACGTGGCACTCTC 57 NA Drosophila melanogaster 61 CG5706 FBgn0039175 FBtr0084637 2 1 1 140 3R 20076560 20076580 TAAACTGCAATAAGACCGCTG 59 20076383 20076458 GGAAGTAGCTGGGATCCTC 59 NA Drosophila melanogaster 61 AP-1sigma FBgn0039132 FBtr0084496 1 1 1 192 3R 19785065 19785086 GATCATTCATCGCTATGTGGAG 59 19785306 19787781 GGTCTCATCCTCTTGGAGC 59 NA Drosophila melanogaster 61 tst FBgn0039117 FBtr0084462 2 1 1 80 3R 19594954 19595039 AGAAATAAGCCCTTTGCTGAG 58 19594894 19594912 ATTCAGCTGCTGAATGCAG 58 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469 1 1 2 140 3R 19559081 19559099 AAGTGGAATCCTGGAGTGC 59 19558618 19558977 GATTGGACATCGCAACGTC 59 NA InUTR Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 3 2 2 277 3R 19382199 19382217 GCTCCTCCTACTATCCACC 58 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cyp6d4 FBgn0039006 FBtr0084304 3 1 1 83 3R 18524993 18525012 CATTCAGCTGAGGAATACCG 58 18525056 18525136 TTAATATGACCATCGGGTGTC 57 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084335,FBtr0302856,FBtr0084334 3 3 3 144 3R 18514115 18514186 ACAATGCTGCAGCTAATCAC 59 18513990 18514008 AGGGCAGAGTATTCGTCTC 58 NA Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 1 2 2 134 3R 17845755 17845839 CTAAACAGGGCCAGGTACC 59 17845639 17845657 CTGAGTCTCCAGCATGAGG 59 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 2 2 3 80 3R 17692976 17693134 ATGACCAGGTCATACAGCG 59 17692914 17692932 TGCGTATCTCCTTCTGCTG 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162,FBtr0301327 2 6 6 80 3R 17615427 17615447 GGATGATGAGCTTATACCCTG 57 17615293 17615387 TCGTCCTTGCTAATAATCTGC 58 NA Drosophila melanogaster 61 CG7922 FBgn0038889 FBtr0084109 1 1 1 92 3R 17309567 17309681 AACACTTTCAGGCAAACCC 58 17309737 17309755 TGTGTTGAAGGAGTAGCCG 59 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 1 2 2 82 3R 17096238 17096314 CGATCGTCTCACAAGATAACC 58 17096358 17096376 CGTTCCTGTTCGATTTCGT 58 NA Drosophila melanogaster 61 AP-2sigma FBgn0043012 FBtr0084103 1 1 1 98 3R 17095401 17095479 CAACTTTGTGGAGTTCCGC 59 17095321 17095339 TAGCACAGGTTGTTGTCGT 59 NA Drosophila melanogaster 61 e FBgn0000527 FBtr0084106 1 1 1 80 3R 17056435 17056453 TATAACAAGGCCGACCTGG 59 17056312 17056395 CCAGATATCGTTCAGTATATCGC 58 NA Drosophila melanogaster 61 CG3353 FBgn0038869 FBtr0084108 2 1 1 97 3R 17043560 17043578 CAAGGTGTCCGATCTACCA 58 17043422 17043499 ATTCGCCAGCAAATTCTCC 58 NA Drosophila melanogaster 61 r-l FBgn0003257 FBtr0084038 3 1 1 107 3R 16898867 16898885 TCAATGCCTTCAAGTTCGG 58 16898718 16898797 ATACGGTTTGCATCACATCC 58 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517,FBtr0089520,FBtr0089518,FBtr0089519 1 4 4 205 3R 16893214 16893801 CATTCAAGTGCACACCCAC 59 16893970 16893988 CTTGAGGTCCGAGATCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 1 2 2 60 3R 16564040 16564324 GGCTCCAGAAACTATCCCA 58 16563998 16564016 TTCTGTATCCACCACGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 3 1 1 62 3R 16407094 16407169 CAGTTCCTACGAGGAGCAC 59 16407050 16407069 ATTAGATCTCCTAAGGCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 1 2 2 80 3R 16114817 16114835 TATACGGATGTGTTGCACC 57 16114879 16114965 GGCATCCAGCGTAATATCC 58 NA Drosophila melanogaster 61 CG31459 FBgn0051459 FBtr0083812 2 1 1 136 3R 15667083 15667102 TTGACCTGATACATCGTCGG 59 15667201 15667283 GCAGCTCATCTGCATACTG 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301378,FBtr0083787,FBtr0301380,FBtr0301379,FBtr0100127 3 7 7 108 3R 15578394 15579483 GCTTCACTAGCAAATAATGCCA 59 15579551 15579570 TTCCAGATGGTCGTATTCGG 59 NA Drosophila melanogaster 61 CG17751 FBgn0038717 FBtr0273217 1 1 1 240 3R 15433427 15433516 TATCACCACAGAGCTGGAG 58 15433714 15433738 CATAAACAGACCGGATATAAATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7342 FBgn0038716 FBtr0083777 2 1 1 81 3R 15431292 15431570 CTGCATCGGATAAGACCAC 58 15431615 15431633 CCTGAATTGTAGGCCACTG 58 NA Drosophila melanogaster 61 CG31245 FBgn0051245 FBtr0083773 1 1 1 85 3R 15202474 15202558 AAAGCGAGATAGCAAACCC 58 15202407 15202427 GCATACTCAGACGATATTGGT 57 NA Drosophila melanogaster 61 Ino80 FBgn0086613 FBtr0083771 2 1 1 80 3R 15224740 15224758 TCGATTGAAGGCGAATGGA 59 15224618 15224696 CACATGTACTCCTCGAGCA 59 NA Drosophila melanogaster 61 vib FBgn0260992 FBtr0083745 3 1 1 84 3R 15044052 15044133 ATCCAACCACCTACCAGTC 58 15043986 15044007 GTCATGACAGGATTAACATGCT 58 NA Drosophila melanogaster 61 CG5835 FBgn0038682 FBtr0083751 1 1 1 174 3R 14979140 14979158 CTTCAACAGTGCGCTTCTG 59 14975346 14977221 GGAAGTATCCTCCACGACAG 59 NA Drosophila melanogaster 61 CG14292 FBgn0038658 FBtr0083725 3 1 1 66 3R 14731300 14731318 CAATTGTTCTACTGGCGGC 59 14731177 14731196 TTTCCAACAGTAGCTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7714 FBgn0038645 FBtr0083686 2 1 1 127 3R 14551971 14552072 GAAAGCCGTGATCTTTGTG 57 14551862 14551880 ACTTGAATCCTGACTGTGG 57 NA Drosophila melanogaster 61 CG34283 FBgn0085312 FBtr0112479 2 1 1 165 3R 14548187 14548205 GAGGAGCACCTAGTCTGTC 58 14547983 14548061 TGATATGATTCTCCATTTCGGC 58 NA Drosophila melanogaster 61 CG31235 FBgn0051235 FBtr0083588 1 1 1 103 3R 14143412 14143431 TGGCTGTTCATGAAGAATGC 59 14143196 14143348 TCGCAATCATTGAAGTACTCG 58 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0100377,FBtr0300242,FBtr0083535,FBtr0083537 1 6 7 80 3R 13793538 13832662 CAATGAGGAAGAGGTTCGC 58 13832703 13832724 CTGAATAACAAATAGAGCTCGC 57 NA Nonspecific Drosophila melanogaster 61 Rim FBgn0053547 FBtr0301555 1 1 1 80 3R 13715498 13716198 GGACACCTCCTATCTCTTACG 59 13715438 13715458 GGCGGTGATAAATGATCTGTC 59 NA Drosophila melanogaster 61 CG7357 FBgn0038551 FBtr0083524 2 1 1 80 3R 13633694 13633769 GGATGTCCATATCTGCCTC 57 13633632 13633652 TGATACTTTGTGGAGTAGTGC 57 NA Drosophila melanogaster 61 CG17475 FBgn0038481 FBtr0083417 1 1 1 60 3R 12955938 12955958 GTAATCAATGGCGAAGATGTG 57 12955898 12955916 TTCCCTGCAACGATATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10326 FBgn0038453 FBtr0083336 3 1 1 103 3R 12469622 12469749 GTTGACCAGAAACGAGCAC 59 12469815 12469834 TAGTACTGCTTCTCCCAGGT 59 NA Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 2 1 1 64 3R 12307854 12307872 TCAAGTGCAATCCCATGGA 59 12307752 12307826 GATTGTGGACGCATATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083313 2 1 2 80 3R 12277855 12278367 CCTTCATCACCGAAGATACGA 59 12277795 12277813 GCTCAACGTAGATTTCGGC 59 NA Drosophila melanogaster 61 CG14894 FBgn0038428 FBtr0083314 3 1 1 62 3R 12268145 12268164 CTATAGAACTGTGGCCGGAG 59 12268048 12268066 CTTGCTCATAGAGCTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0083240 1 1 2 93 3R 11789257 11789328 ATCAATCGCTAGCCATGGA 59 11789182 11789200 TTGGTTAGTGCTTGCATGG 58 NA InUTR Drosophila melanogaster 61 CG5073 FBgn0038331 FBtr0083094 3 1 1 80 3R 11198228 11198247 GCCGATCTGAATGTTAACCT 58 11198290 11198366 GCGGTATTCATTGAGGTCC 58 NA Drosophila melanogaster 61 Sra-1 FBgn0038320 FBtr0083085 1 1 1 81 3R 11161923 11161941 AACACTGCACGTCTTTGTG 59 11161985 11162065 TCGAATGAAACGATTCGTGG 59 NA Drosophila melanogaster 61 Set FBgn0014879 FBtr0083062 1 1 1 121 3R 11089658 11090086 GTGACCTCGTTTATCAACCAC 59 11090168 11090187 CGGTAACCCGATTTGATGTC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 81 3R 11002133 11002151 AGCTAACTACGACGCAGAG 59 11002000 11002088 ATAGCGAGATGGGTACCTG 58 NA Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 2 2 2 84 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707626 10707644 TCGATCGATGATTTCCGTG 57 NA Drosophila melanogaster 61 HtrA2 FBgn0038233 FBtr0082987 2 1 1 98 3R 10336612 10336630 GTACAGGTGAGGCTATCCG 59 10336464 10336550 ATTGTTCACCTGTATGCGC 58 NA Drosophila melanogaster 61 CG9722 FBgn0038209 FBtr0082906 3 1 1 60 3R 9978960 9978978 GCGTTACGACTTTACCGTC 59 9978918 9978938 GAAGAGCAGTATTATCAGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9922 FBgn0038196 FBtr0082870 2 1 1 153 3R 9861355 9861373 AAAGGAGATCTCTGCGGAC 59 9860986 9861171 CAGCAGCTCGTTCATAATCAG 59 NA Drosophila melanogaster 61 CG9286 FBgn0038183 FBtr0082830 2 1 1 97 3R 9606886 9606965 TAAGGGAAACGAGGAGGTG 58 9607026 9607044 GAAGGAATAGTCGCTGCAG 58 NA Drosophila melanogaster 61 CG31337 FBgn0051337 FBtr0082790 3 1 1 84 3R 9370324 9370342 ATGTACAAGGAGCACATGC 58 9370090 9370276 ACAAATGATAGCCTTCGCG 58 NA Drosophila melanogaster 61 Ir87a FBgn0038153 FBtr0082784 1 1 1 82 3R 9247598 9247616 TTAGCATCGAAATGCAGGG 58 9247656 9247777 GACTATCATCTCTATTTCACCATCG 59 NA Drosophila melanogaster 61 CG14380 FBgn0038124 FBtr0300768 2 1 1 81 3R 9014575 9014593 TTATTCCAGGACCCGTCTG 58 9014700 9014720 GGTAGAAGCGCAGTTAAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 pps FBgn0082831 FBtr0301631 2 1 1 92 3R 8239993 8240077 ATTGGGAACATCATGGAGGA 58 8240132 8240150 GTCTTCCTCTTGGTCCACC 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579,FBtr0082578 1 3 3 60 3R 8213637 8213708 GAGCTGAAGGAAGTCTTCTC 57 8213731 8213749 CATCCTTCGAGATCAGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3942 FBgn0038008 FBtr0082561 1 1 1 60 3R 8080714 8080733 AAATTAAGGCAGGGAACCAG 58 8080755 8080774 ACACATAGATTGGTCACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082548,FBtr0082547 3 2 2 60 3R 7989122 7989141 TCGCAGTAGCTGAAATTCCA 59 7989081 7989102 CTCTGTTCAACAATGACCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14741 FBgn0037989 FBtr0300351 1 1 1 80 3R 7896819 7896898 TGATTAAAGCTGCTCACATAGG 58 7896760 7896779 CAATGGAATAGTCGCTGGAG 58 NA Drosophila melanogaster 61 CG14731 FBgn0037964 FBtr0082478 3 1 1 83 3R 7757603 7757625 CGTCTTTCAGTTCTAATACTGGG 59 7757665 7758003 TATCAAGTCCCTTACTCGACTG 59 NA Drosophila melanogaster 61 Cad87A FBgn0037963 FBtr0082513 3 1 1 80 3R 7725212 7725759 TCTTGTCATACAAGGCCAC 57 7725150 7725170 TGGCATCAGTTACAGAAATCC 58 NA Drosophila melanogaster 61 CG6808 FBgn0037921 FBtr0082451 3 1 1 83 3R 7447782 7447803 AACCTTACCAATGTTGCTACTG 59 7447650 7447739 TTTCATTCGTGTGCAAACGT 59 NA Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 2 2 2 136 3R 6680674 6680692 GATGACCTAAAGGTCCTGC 57 6681052 6681071 TTCGACATCTCGAAGAACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3909 FBgn0027524 FBtr0082172 3 1 1 111 3R 5869713 5869789 TTAGCATTGCCTACAGTCCC 59 5869862 5869881 TGTCCTTCCAATGTTTGCAC 59 NA Drosophila melanogaster 61 CG16779 FBgn0037698 FBtr0082125 2 1 1 107 3R 5297770 5297788 AAGAAGGACTCCAGTGGTC 58 5297615 5297702 AAAGGAGCCCTTAGTCATATCC 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 2 2 2 68 3R 5091781 5091857 TAACCTGGAATTCGTGGGA 58 5091731 5091749 GTAACGCACTTCTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0301425,FBtr0089784,FBtr0089782,FBtr0112823,FBtr0089781,FBtr0114459,FBtr0112822 3 8 8 96 3R 4666328 4668402 GATCGATTGCAAGTCAACGA 59 4666251 4666269 CACTATCGCGTAACACCTG 58 NA Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 3 1 1 89 3R 4632214 4632232 GAACTCAGAGATGAGGCCT 58 4632284 4632356 AACTATTTCCTGCTTCTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 Cks85A FBgn0037613 FBtr0081949 3 1 1 63 3R 4541377 4541468 GAATACAGGCATGTTATCTTGC 57 4541335 4541353 TCATCAGATGAGCCTTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cenp-C FBgn0086697 FBtr0089973 1 1 1 80 3R 4393440 4393532 GAACTAAATACTACCGGTATTCGG 59 4393571 4393589 AGGATCCATGGTGTGACAC 59 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 3 1 1 247 3R 4116155 4116235 TTTGCTGACTTTGGCAGAC 59 4115926 4115949 GGTTTGTCTCATAGATCACATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 ImpE3 FBgn0001255 FBtr0081819 2 1 1 60 3R 3854698 3854717 TTTGATACCCTGCCTTTGTC 58 3854657 3854675 TGGTAAAGTCGTAGCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2846 FBgn0014930 FBtr0081763 1 1 1 91 3R 3738576 3738658 CCCAACAGCTAACTTTCCG 58 3738503 3738521 CATTATCCACGTTTGCCCA 58 NA Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539,FBtr0081538 1 2 2 60 3R 3357636 3357654 TCGAACGACCCACTTACAC 59 3357676 3357696 GTGATCGAGGACACTATTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt4 FBgn0028400 FBtr0081578 1 1 1 199 3R 3092606 3093397 TCATGGACACGATTGTCCC 59 3093560 3093578 CTTCTTCAAGTAGTGCGGC 58 NA Drosophila melanogaster 61 CG10050 FBgn0037492 FBtr0081577 1 1 1 80 3R 3075668 3075748 CGAGAAATGCAAACGACCC 59 3075792 3075810 ACAATCTGTGAGGACACCG 59 NA Nonspecific Drosophila melanogaster 61 MAGE FBgn0037481 FBtr0081606 2 1 1 60 3R 2980371 2980390 TCGAAACTGTACGTTATGCT 57 2980330 2980348 AGTAGCCATGTTCTTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31493 FBgn0051493 FBtr0081566 1 1 1 99 3R 2957467 2957556 AAGTTGAAGAGCTGCTTGTG 59 2957618 2957636 TTACCTAGCTCGGCAATGG 59 NA Drosophila melanogaster 61 ftz FBgn0001077 FBtr0081625 2 1 1 83 3R 2690791 2690809 CATCGAATTGTGACAGCCC 59 2690855 2691021 GTCTTTGCAATCTGATGCCA 59 NA Drosophila melanogaster 61 snRNP2 FBgn0037434 FBtr0081737 2 1 1 128 3R 2171354 2171508 AGTTATAATCCGCTATGGCTC 57 2171246 2171264 TGTTGTTCTTCACGGACTG 58 NA InUTR Drosophila melanogaster 61 CG31559 FBgn0051559 FBtr0078616 2 1 1 60 3R 1981913 1981931 GAATAGCCACGTTCTTGCA 58 1976754 1981892 TCTTTCTCCTTGAAGTTCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 2 4 4 80 3R 1401030 1401048 GCATTCTGTGCAAAGAGCT 59 1401086 1401170 CTGAGTCATTCAACTGATAAAGTCC 59 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765,FBtr0078764 1 2 2 80 3R 1316475 1316493 GCCATGACCATATTCACGC 59 1316349 1316431 AATTGTGAGACCTCCGTCG 59 NA Drosophila melanogaster 61 ksr FBgn0015402 FBtr0078766 2 1 1 60 3R 1306901 1306920 ATTATCACGGACTTTGGGCT 59 1306860 1306881 CTAGGCCCATATCACAGTAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0100433 3 1 2 98 3R 1201559 1201580 CCCAGGTTCATTTAATTAACCG 57 1201639 1201719 TCTTATGGGCTTTGTCGTG 57 NA Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078828 1 1 3 92 3R 1048901 1048980 GCGATACAGTGATATCGCA 57 1048827 1048845 AATCACATCCAGTCGATCG 57 NA InUTR Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 1 2 2 105 3R 992799 992887 CAATCGGAACACGATTGGT 58 992956 992974 CAACTGCATAGAAGCTGCC 59 NA Drosophila melanogaster 61 CG14662 FBgn0037291 FBtr0078846 2 1 1 110 3R 808112 808364 GTATGAGCAAGTGGGAGGT 59 808020 808038 TACTTGTTCGACTCCGTGG 59 NA Drosophila melanogaster 61 Dip2 FBgn0040466 FBtr0078893 2 1 1 85 3R 470787 470911 TTACTACAATTGACGCAGTCC 58 470722 470740 CACAGCTTCCTTTAGAGCA 57 NA Drosophila melanogaster 61 CG34305 FBgn0085334 FBtr0112501 1 1 1 99 3R 68761 68844 CTTCATAATCCTGCTAGTCCTG 58 68683 68701 ATCATCTTTGTAGCGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CR34031 FBgn0054031 FBtr0100086 1 1 1 104 3L 23178380 23178401 CGAACAGAAAGTATTCTTCCCT 58 23178536 23178554 ACTATAGGCCTGACGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Lcp65APsi FBgn0020646 FBtr0076993 1 1 1 82 3L 6141086 6141439 TTTAGGGCTACTACTTCCGAC 59 6141483 6141501 ACAATCTCTGCATCCGGAG 59 NA Drosophila melanogaster 61 alpha-Cat FBgn0010215 FBtr0070038 3 1 1 80 3L 23324107 23327476 GGATAATATGAGGCAATTCGGA 58 23324048 23324069 GGATCCTTAAGTTCTTGCTGAC 59 NA Drosophila melanogaster 61 CG7370 FBgn0037133 FBtr0078436 2 1 1 178 3L 21763051 21763072 GCAATTAATGCTCAGAAACTCG 58 21763308 21763326 TTAAGTGTTGACTTGGGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7166 FBgn0037107 FBtr0301161 3 1 1 80 3L 21615259 21615277 CTTGGAACACAACGCTGTC 59 21615136 21615217 TGGTGGATATCGCTTATCTCG 59 NA Drosophila melanogaster 61 Neu2 FBgn0037085 FBtr0078394 2 1 1 60 3L 21482780 21482801 GGCAATGAACCTGATATTAACG 58 21482741 21482759 AGCTAAAGCCTGGTTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678,FBtr0112677 3 3 3 60 3L 21326550 21326568 CAAGACGGGACTCAATGTG 58 21326592 21327011 GCGACTCTTTAGTTGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 chb FBgn0021760 FBtr0089462 3 1 3 100 3L 21171017 21171035 CATAATATACGCCGCTCCG 58 21171253 21171271 GATAAAGCCATCCAGGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4074 FBgn0037017 FBtr0078280 3 1 1 119 3L 20761742 20761760 ACCCATCCATATGGTCCTG 58 20761577 20761595 TCACTAACCGTGTAGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG4825 FBgn0037010 FBtr0078214 1 1 1 89 3L 20516792 20516810 CATCTTTGAGATGCCACCG 59 20516654 20516741 TAATATTGCCTAACCGAAGGC 58 NA Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 3 2 2 72 3L 20420615 20420633 GGAAGGGCGATATGAAGCT 59 20420509 20420579 ATCAATGTTTCCAGTCGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5665 FBgn0036977 FBtr0078182 2 1 1 88 3L 20352064 20352082 CACCGTAAACGAATCCTCG 58 20352134 20352204 CAGCCGCATCTACAATCAC 59 NA Drosophila melanogaster 61 CG32225 FBgn0052225 FBtr0074845 1 1 1 154 3L 20297928 20297946 TTCATGTTCAAGGACAGCG 58 20297735 20297810 TTGAAGTATCTCCAACCGC 57 NA Drosophila melanogaster 61 CG42654 FBgn0261506 FBtr0302431 3 1 1 100 3L 19947182 19947253 TCTTATCGCAATATGGTTGGC 58 19947102 19947120 ACCCATAAGTGCTGAAGCT 59 NA Drosophila melanogaster 61 CG33710 FBgn0053710 FBtr0091698 1 1 1 92 3L 19945717 19945792 CAATACGGCTGACCATAGC 58 19945643 19945661 AAGTGGCACGTAAATCCTG 58 NA Drosophila melanogaster 61 CG42638 FBgn0261361 FBtr0302283 2 1 1 60 3L 19741404 19741424 GCCTTCTCACATCTATTCCTG 58 19741364 19741382 GCGGATAACTCTCCACCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302279 3 1 3 120 3L 19786640 19786658 AAATCGGGTAGGTAGTCGC 59 19784695 19786556 GCATCTGCAGCGAATTCTC 59 NA InUTR Drosophila melanogaster 61 CG9279 FBgn0036882 FBtr0074976 2 1 1 80 3L 19535272 19535408 AGCTTCCAAAGAATCCAGTG 58 19535211 19535231 GAGACAAGGTTACTTCTCCAG 57 NA Drosophila melanogaster 61 CG18294 FBgn0036873 FBtr0074984 3 1 1 84 3L 19468543 19468616 ATCCGCCGTTGTTATTCTG 58 19468477 19468495 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG32214 FBgn0052214 FBtr0273411 3 1 1 88 3L 19460504 19460581 TCAAATACGCTGTCGTCGT 59 19460633 19460651 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 CG34256 FBgn0085285 FBtr0302318 3 1 1 86 3L 18982310 18982580 CTACTTTGAAGAGCTGGATCTG 58 18982245 18982264 GGTAAGGAACAATGCAGCTC 59 NA Drosophila melanogaster 61 CG3819 FBgn0036833 FBtr0075048 1 1 1 124 3L 18915150 18915168 TTCAGTGGCCTCTTCTTGG 59 18914787 18915062 ATTGAACAACCAGCTGCTC 58 NA Drosophila melanogaster 61 CG32181 FBgn0052181 FBtr0301018 2 1 1 80 3L 17754345 17754464 TGCGTAATCAAACGAAGTACG 59 17754505 17754524 ATCTAGCGTTTCGCAAAGTC 59 NA Drosophila melanogaster 61 CG32182 FBgn0052182 FBtr0075188 3 1 1 60 3L 17751380 17751398 ACCAACTGAGACTGATGGA 57 17751420 17751440 CACAATTGCAGTATCAAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adgf-B FBgn0036751 FBtr0075193 1 1 1 66 3L 17742652 17742670 TGTGGTCGAGCAATATGTG 58 17742542 17742560 GCCAACCATGAAGTTAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG7542 FBgn0036738 FBtr0075181 3 1 1 60 3L 17543219 17543239 CAAGAAAGGATCATGGTGGAG 58 17543260 17543279 TGCTGGCCATATAGTTCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585 3 1 2 128 3L 17039666 17040454 GGTCGATGAGGACAAGTCC 59 17040545 17040564 TTATCGTACAAACGGAACGC 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 2 3 10 77 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13024 FBgn0036665 FBtr0273320 2 1 1 91 3L 16803226 16803247 TTGATAGTCAGCATGAGTACCA 59 16803097 16803115 TAGCTCTTGGGCATGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)73Ah FBgn0002283 FBtr0075311 2 1 1 80 3L 16582567 16582586 GATAACGCATCTCAAGAAGC 57 16582628 16582765 TTGCACAGTATGTCGATCTC 57 NA Drosophila melanogaster 61 CG4982 FBgn0036598 FBtr0075469 1 1 1 96 3L 16294578 16294661 GCGAAGATGTTCAAAGTTGTG 58 16294719 16294737 ATTCCACGTGCTCATAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 2 2 2 104 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274835 16274854 ATGGAAAGGAAGGAGACCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13053 FBgn0040801 FBtr0075480 3 1 1 82 3L 16252432 16252519 ATTATCTCTGGTTAGCAGTGCT 59 16252371 16252389 GTAGCTGACACCGAAGGAG 59 NA Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075486 2 1 2 74 3L 16207000 16207019 TATCGAATGCAACTGGAAGC 58 16206701 16206719 CTATATGAACACGGCGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 SsRbeta FBgn0011016 FBtr0075453 2 1 1 74 3L 16123356 16123374 CTACAAGGCTGTCGAGGAG 59 16123634 16123652 TTGACAATTCCACCCTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33258 FBgn0053258 FBtr0301030 3 1 1 70 3L 16076162 16076180 ATGTACGCCTTCTTGTGTC 57 16076282 16076302 TTGTCGTGTATTCACTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17027 FBgn0036553 FBtr0075516 2 1 1 90 3L 15974044 15974293 ATGCTAGACGACTTGTTGC 58 15974346 15974365 ATGTCCTCAATGTAGAAGGC 57 NA Drosophila melanogaster 61 CG33985 FBgn0053985 FBtr0100030 2 1 1 93 3L 15519357 15519375 CACTTCCCATGAGTTGTGC 59 15519220 15519301 TAAGTCATGGCCAAACACCT 59 NA Drosophila melanogaster 61 CG7272 FBgn0036501 FBtr0075548 1 1 1 80 3L 15496327 15496411 GAATACTGTGATGGTGCTGC 59 15496451 15496472 TTGGGATAAATAGCGAACATGG 59 NA Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 2 1 1 80 3L 15490374 15490460 GTTACGTTGAGCTCTCCGT 59 15490502 15490522 TTTGAAGTACCTTGAGAGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 FucTA FBgn0036485 FBtr0075641 1 1 1 80 3L 15145216 15145234 TCTGGAGTGTCCGTATCAC 58 15145277 15145481 GTACTATCCCGTCTGTAGGT 57 NA Drosophila melanogaster 61 Brd FBgn0000216 FBtr0075621 3 1 1 83 3L 14965977 14965995 CAACTGAAGAACCACTCCA 57 14966042 14966060 CAATTGCTCGTTCTGGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075724 1 1 2 81 3L 14543148 14543166 ATTCAGTCACAGTCCACCC 59 14540570 14543105 CTCGTCATTGTAGTTCAACGA 58 NA Drosophila melanogaster 61 CG32141 FBgn0052141 FBtr0075735 2 1 1 83 3L 14196679 14196699 TGGTGATTCTTACGATTGTCC 58 14196744 14196821 ACATAGGCACATCGTTCCA 59 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 2 2 2 86 3L 13975944 13976213 AGCGATACAGGAATACCGC 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 CG10154 FBgn0036361 FBtr0075854 1 1 1 99 3L 13429170 13429330 TAACTGCACGATTGATGCT 57 13429089 13429108 GAAGTGAGTTCCCATAAGGG 57 NA Drosophila melanogaster 61 CG10222 FBgn0036356 FBtr0075861 2 1 1 60 3L 13404929 13404949 AACGTGGACTATTATACGGAC 57 13404889 13404907 CATCGTCCAGTTTGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075896,FBtr0075895 2 2 2 100 3L 13013916 13014182 TACATTTCGGGCTTCTTCCT 59 13013835 13013853 GCGCTGAGGTTCATTAGGA 59 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 3 3 3 133 3L 12820166 12820185 TATCCTGTTCGTCTATGCCG 59 12819718 12820072 CTTTGGAAACCAAGTAGGTGG 59 NA Drosophila melanogaster 61 caup FBgn0015919 FBtr0075909 3 1 1 80 3L 12610322 12610341 TCCCTCTAACGAACAGAACC 59 12610384 12610704 CCGTAGGGATTGCTCAGAG 59 NA Drosophila melanogaster 61 CG10361 FBgn0036208 FBtr0076084 2 1 1 85 3L 11792270 11792350 ATGAGATGCTAACCCGTGG 59 11792203 11792221 GATTTGAACACGGATGCGT 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 1 3 3 91 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 TfIIEalpha FBgn0015828 FBtr0076108 3 1 1 97 3L 11676420 11676440 CATATGAAGGGTATGCGAGTG 58 11676498 11676585 TCGACATCAGGAATCTTGGA 58 NA Drosophila melanogaster 61 CG11726 FBgn0036156 FBtr0076172 1 1 1 60 3L 11388197 11388217 GATCCGTTCTCTAACCATTCC 58 11388239 11388257 TTCCACATACGCAAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6199 FBgn0036147 FBtr0076187,FBtr0076188 1 2 2 80 3L 11195965 11196052 AGACTTGGAAGAGACAAACCT 59 11195905 11195924 AGAAACTGGTCGAAGAAGGG 59 NA Drosophila melanogaster 61 CG6272 FBgn0036126 FBtr0076234 1 1 1 108 3L 11090963 11091108 AACAATGAGGCTGTTCAGC 58 11090873 11090893 TCTGAACCTTAAGAGCATCGT 59 NA Drosophila melanogaster 61 CG14145 FBgn0036118 FBtr0076202 3 1 1 60 3L 11055025 11055046 ATACTTCGACCAGTGAATTGAG 58 11055067 11055085 ATTTGCTGCATCATCGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6463 FBgn0047038 FBtr0076276 2 1 1 80 3L 10686960 10687107 TCATTAAGGCGTCCACAGG 59 10686898 10686917 TCTTGCCATACAGAGCACTC 59 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076351 3 1 5 298 3L 9966117 9966138 CAGACGATCACGTTATAATGGA 58 9966397 9966415 TGGTCATTAGGTCTTCCGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076352,FBtr0076350,FBtr0076348 3 3 5 252 3L 9966070 9966088 TGTTAGTATCGTCGCAGCA 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 2 2 2 71 3L 9887484 9887502 TAAAGGAAGCAATTCCGCC 58 9887370 9887449 ATCGTTCTCGGATCATGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362,FBtr0076363,FBtr0076365,FBtr0076364 3 4 4 96 3L 9854168 9854187 CCGGTGACTGAACTTAAGGA 59 9854029 9854110 GCAGATTGCCAATGGTAGAG 59 NA Drosophila melanogaster 61 Ilp3 FBgn0044050 FBtr0076373 1 1 1 81 3L 9794899 9794989 CCAAGAGAACTTTGGACCC 58 9794836 9794855 TCACTCAACAGTCTTTCCAG 57 NA Drosophila melanogaster 61 CG4942 FBgn0035960 FBtr0076524 2 1 1 167 3L 9066616 9066635 CCTCTGACCATTTACCAGCA 59 9066765 9066840 CTGCTTCTTGATCGAACGC 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137,FBtr0301913,FBtr0290105,FBtr0076565 1 5 5 83 3L 8928152 8928170 TCATCGGGAACTACACCAC 59 8928030 8928105 TTGCTGTAAATCTGCCTGC 58 NA Drosophila melanogaster 61 Arr2 FBgn0000121 FBtr0076599 1 1 1 121 3L 8640997 8641082 AAGGATCGCCATGGTATCG 59 8640894 8640915 TACGAGATGACAATACCACAGG 59 NA Drosophila melanogaster 61 Nmt FBgn0020392 FBtr0076728 3 1 1 136 3L 8171312 8171331 GTTGCCGGCTTAAATATCCA 58 8170712 8170730 GAAACGGCTTGTAGCAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076764 1 1 2 109 3L 7968938 7968956 ATGCATTGTACGTGTAGCC 58 7968773 7968865 GATCGCTGCCACTATTCTC 58 NA Drosophila melanogaster 61 CG8492 FBgn0035813 FBtr0076813 1 1 1 81 3L 7722387 7722405 AGCCCATCTAAGTCCACTC 58 7721842 7722342 TGGACGAGTAGTTGGACTC 58 NA Drosophila melanogaster 61 CG7457 FBgn0035812 FBtr0076814 3 1 1 81 3L 7718885 7718959 ATCAAAGACCTTTCAGGTCAG 58 7718824 7718842 TAACTACGCCGATGTTCAG 57 NA Drosophila melanogaster 61 CG32397 FBgn0052397 FBtr0076985 1 1 1 80 3L 6558068 6558503 TTACGTCAGCAATGACGTG 58 6558006 6558024 TTGTCCAGCACTCTTCCTC 59 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 1 2 2 80 3L 6540631 6540649 AAATGCCTCGGAAAGTCCA 59 6540691 6541796 GAGATAGTATCGCTGCAACAG 58 NA Drosophila melanogaster 61 CG10144 FBgn0035704 FBtr0076986 3 1 1 82 3L 6488110 6488197 TTCGAAGATCTTGATGATGCC 58 6488048 6488066 TCAAATTCACTGAGCACCG 58 NA Drosophila melanogaster 61 yip7 FBgn0040060 FBtr0077038 1 1 1 71 3L 6028555 6028573 CATCATCGGAAACGAGTGG 58 6028664 6028682 TAGTAGATGGTCACGGAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10479 FBgn0035656 FBtr0077070 2 1 1 117 3L 5962003 5962021 CACAAGGTCTACGACAGCA 59 5961684 5961925 CGAGAAGGTCCTCATCATAGTC 59 NA Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 2 2 2 122 3L 5788749 5788767 TTGCTCGATCAGGATCTGG 59 5788240 5788663 TTGGCAATGCTGTTTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 3 2 6 135 3L 5764463 5764727 TGCGAACAGACAATAACGG 58 5764826 5764844 GGATAGAGGACCCTCTTCG 58 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 2 3 3 80 3L 5753889 5753966 ATCACTTTGGACCAGGACAG 59 5754003 5754027 CATATAGCTCAGTTTGTCTATTGGG 59 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077132,FBtr0077131 2 3 3 64 3L 5562089 5562227 AACAACAAGAAATCCCGCA 58 5562043 5562061 GAGTCGACAATCTCCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 2 2 2 80 3L 5556486 5556601 GTTCATAAGGTTCCCGTGC 58 5556424 5556444 TATGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 membrin FBgn0260856 FBtr0077145 1 1 1 60 3L 5359812 5359831 ATTGAAGATTACCCAGGCGA 59 5359920 5359941 CACCTTATACAACAGCACATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4611 FBgn0035591 FBtr0077165 2 1 1 110 3L 5131296 5131314 TCAGTTGAGTCTGGAGGAG 58 5131388 5131462 TTGGTTGATGGATGTCTGG 57 NA Drosophila melanogaster 61 CG33514 FBgn0053514 FBtr0091456 3 1 1 148 3L 4365786 4365863 GATTCATCAAACGGGTGCC 59 4365975 4365993 CAATCTCCTGCATTGCCTG 59 NA Drosophila melanogaster 61 CG11582 FBgn0035525 FBtr0300579 2 1 1 60 3L 4283368 4283386 GGAATTCGAAGGAATGCCA 58 4283326 4283347 GTATCCATCGTTTGGAGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11586 FBgn0035520 FBtr0073243 3 1 1 109 3L 4262315 4262334 ATGGGACAAGAACGAGTACG 59 4262166 4262184 TATAGTCGCGTCGCTTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564,FBtr0302565 3 2 3 81 3L 4198924 4199006 CTGCAATAAGGTTTATTAGCGG 58 4199047 4199066 TGATCGTACAATCGAAGCAC 58 NA Drosophila melanogaster 61 Rop FBgn0004574 FBtr0073263 1 1 1 60 3L 4138543 4138563 GATCTATCTGATTACGCCGTC 58 4138503 4138523 GTTCTCGAAGTCTCGTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 2 2 2 90 3L 3372839 3372978 ACGAGAGTGGTAAATTTGCAG 59 3372769 3372787 ATACTAGGCGGCAATACCC 59 NA Drosophila melanogaster 61 dro4 FBgn0052282 FBtr0073061 1 1 1 60 3L 3315680 3315698 CCATTGTCCTAATGGTGGC 58 3315722 3315740 CTGAATCTTCCAGATGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12017 FBgn0035429 FBtr0073052 2 1 1 83 3L 3289114 3289132 ATAGCCCTGATTGGTCTGC 59 3289176 3290311 GTATACAACCTTAGATGGCGGA 59 NA Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073027 3 1 2 69 3L 3160099 3160191 GAATCATCTTAAGTGGATGGGC 59 3160220 3160239 ATTATCATTACGCAGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cht7 FBgn0035398 FBtr0073124 3 1 1 80 3L 3091930 3091949 AAGGTGGAGTTGGAATACGA 58 3091809 3091889 CACATCATGAGGATCTTTGGT 58 NA Drosophila melanogaster 61 CG2107 FBgn0035383 FBtr0072978 1 1 1 87 3L 2982109 2982131 CGAAGAAGATGGAGTCTTTAACG 59 2982178 2982257 GTCGAACCAACGATTCTGC 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 2 2 2 80 3L 2961804 2961824 ATGATCCGACTCTCCTATACG 58 2961864 2961943 AATTGTCCAGATTCTGAGCAC 58 NA Drosophila melanogaster 61 CG42304 FBgn0259200 FBtr0299684 1 1 1 80 3L 2653598 2653617 AACACAATCACCTTGTCCCT 59 2653655 2653738 GTCTGGTGTGGTTACATATTTCTG 59 NA Nonspecific Drosophila melanogaster 61 CG13800 FBgn0035338 FBtr0072891 2 1 1 80 3L 2388773 2402567 CTCATACAGACTGTTCAAACCA 58 2402608 2402626 GCTATTCCGGTCATTGGTC 58 NA Drosophila melanogaster 61 CG2034 FBgn0015359 FBtr0072877 3 1 1 152 3L 2257795 2257886 CGTAATAGATGAGCTAAATCGGG 59 2257997 2258016 TACTTGTCGATCAGTGCCTC 59 NA Drosophila melanogaster 61 CG7967 FBgn0035251 FBtr0072809 2 1 1 89 3L 1652749 1652769 AAGTCCATCCAACACTTTCTG 58 1652619 1652699 CTGGAGAGCATAGAGTCTCG 59 NA Drosophila melanogaster 61 CG13919 FBgn0035248 FBtr0072759 2 1 1 60 3L 1645798 1645817 AAGTGATGATCTGCCTAACG 57 1645840 1645858 GCAACGGTCACGTATATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir62a FBgn0053971 FBtr0100014 2 1 1 60 3L 1529888 1529907 CAGCCAGAAGAGAATCTCCA 59 1529847 1529867 CCAACGAATTGTACTGATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysS FBgn0004430 FBtr0072631 1 1 1 81 3L 1227916 1227934 CAGCACGAGAGTGACTACC 59 1227976 1227997 TGATCTGGAAGATTCCGTAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12038 FBgn0035179 FBtr0072619 3 1 1 113 3L 994198 994282 CCTCAACTTGATGTGCCAG 58 994358 994377 ATATCATTCAGCGGACACTG 57 NA Drosophila melanogaster 61 CG13889 FBgn0035168 FBtr0072586 2 1 1 80 3L 847604 847622 TATCCCTGAAACAGACGCA 58 847663 847741 ATGAATGCTGGAGGAATTTGTG 59 NA Drosophila melanogaster 61 CG34453 FBgn0085482 FBtr0299518 3 1 1 97 3L 232916 232936 CTTGAGTCCAGATTACAAGCA 58 232782 232859 CAATGGTAGAGCTTGAAGTGG 59 NA Drosophila melanogaster 61 CG34453 FBgn0085482 FBtr0299518 2 1 1 81 3L 232780 232855 TTCAAGCTCTACCATTGGC 57 232717 232735 CGCAGGAGAAACATATTGC 57 NA Drosophila melanogaster 61 NitFhit FBgn0024945 FBtr0072483 3 1 1 129 3L 203777 203848 CAGTAAACAACTAGCCGGC 58 203941 203959 TCGCACTTTGATCCTTCCT 59 NA InUTR Drosophila melanogaster 61 CG34140 FBgn0083976 FBtr0110975 3 1 1 82 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183628 183647 AAAGTTCGAAAGTCGTGGAC 58 NA Nonspecific Drosophila melanogaster 61 snoRNA:Or-aca1 FBgn0082925 FBtr0113530 1 1 1 60 2R 18495065 18495084 TTGTTGGAACTTATAGCCGT 57 18495106 18495125 CGACATGCACTTAATCTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR14499 FBgn0034317 FBtr0086751 3 1 1 60 2R 14075374 14075393 AAGAACTTCTTCGGATCGTC 57 14075414 14075434 ATTGCTAAAGCTCAGAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30428 FBgn0050428 FBtr0072451 3 1 1 80 2R 21141272 21141348 CGAATGGAAACGGGTTTGG 59 21141391 21141410 GCCTTAGAGTTCTCTAGCCG 59 NA Drosophila melanogaster 61 gsb FBgn0001148 FBtr0072444 2 1 1 178 2R 20949717 20950766 CCTTTCAAGGACAAGGTCG 58 20950905 20950926 GAAGCGGTTTAGAATCTTTGAG 57 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 2 4 4 60 2R 20420050 20420125 CGCCTCATCAACTTCATACG 59 20420147 20420166 CATCGTAACACTCGTTGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13589 FBgn0035011 FBtr0072354 2 1 1 207 2R 20380122 20380141 CCACATTCATAGAACCAGCG 59 20379873 20379952 ATCTGCAAGCCCTCATAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0100585 2 1 2 60 2R 19951054 19951072 GTACGATCCCACCATCGAG 59 19951092 19951114 CCCATACAATGTACATACCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HSPC300 FBgn0061198 FBtr0072194 1 1 1 80 2R 19916183 19916204 GAACAGGGAGTATATCGAAGTG 58 19915635 19916144 CGACAGGACATATCGAAAGAG 58 NA Drosophila melanogaster 61 CG17658 FBgn0034924 FBtr0072133 1 1 1 80 2R 19782694 19782774 GAAACTTGGTCAAGGAATCTG 57 19782816 19782834 CGAAGCACTTCAGAAAGGA 57 NA InUTR Drosophila melanogaster 61 CG5532 FBgn0034902 FBtr0072091 3 1 1 245 2R 19640372 19640390 GATATGTGTACGCAGCCAC 58 19640658 19640676 ATAGCATGCACACCATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10332 FBgn0260455 FBtr0072109 1 1 1 91 2R 19489000 19489086 GGATCTGCAAACAGAACGC 59 19488927 19488945 TCAGGTCGGTTAGATTGGC 59 NA Nonspecific Drosophila melanogaster 61 CG9863 FBgn0034846 FBtr0290285 1 1 1 60 2R 19234805 19234825 CGAAATAGTGCTCACCTTCTC 58 19234845 19234865 TTCTATATCCCGAGGATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9876 FBgn0034821 FBtr0071979 2 1 1 92 2R 18978465 18978483 TCGAACGCACTCACTATCC 59 18978211 18978411 TCTGAAACCAGACCTGAACTC 59 NA Drosophila melanogaster 61 CG9897 FBgn0034807 FBtr0071989 1 1 1 80 2R 18873476 18873495 CACCACCGATGAAATAAAGC 57 18873360 18873433 CCGCTGCTAATCCTATTGG 58 NA Drosophila melanogaster 61 CG13516 FBgn0040658 FBtr0100554 1 1 1 93 2R 18557549 18557658 GTTTGGTCGGATTCTGCTG 59 18557715 18557733 AAGGTGTTACACTTGCGAC 58 NA Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 3 1 1 60 2R 18010963 18011043 ATAGAAGAGCCAACAAGCCT 59 18011063 18011084 TCATCAAACACTAATTCCGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 3 4 5 149 2R 17956166 17956251 GGAGATAATTGAATTCCCAGCA 58 17956361 17956379 CTGTCCACAGTCTTCTGCT 59 NA Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071685 3 1 2 118 2R 17538919 17539021 AACATCCGGGTACAGAAGG 59 17538819 17538837 AGAGCATGTTGAACAGTGC 58 NA Drosophila melanogaster 61 CG10080 FBgn0034641 FBtr0071658 2 1 1 81 2R 17513308 17513448 CTTCATGGGCAAACTCCTC 58 17513490 17513511 TAGTTCTAGAGAACTGCGACTG 59 NA Drosophila melanogaster 61 Rgk3 FBgn0085426 FBtr0112646 2 1 1 117 2R 17159684 17159702 AATCAAACGCCTTCCTGGA 59 17159781 17163661 TTGATGATACCTCCCTTGGAG 59 NA Drosophila melanogaster 61 CG15651 FBgn0034567 FBtr0071553 3 1 1 81 2R 16873021 16873039 GATGAACCTGGATTTGCCC 58 16872899 16872977 CTTCTGCAGGAACAAATCAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG16739 FBgn0034505 FBtr0086286 1 1 1 130 2R 16229945 16230025 ATTGTCAAAGTGGAGCTGC 58 16230119 16230137 TTAAGATCGCCATTACCGC 58 NA Nonspecific Drosophila melanogaster 61 CG10822 FBgn0034478 FBtr0086339 2 1 1 178 2R 15838971 15839041 AGAGACAGATCCAAAGCGA 58 15839183 15839201 ACTTCTCCCGCAAATTGTC 58 NA Drosophila melanogaster 61 CG34197 FBgn0085226 FBtr0112390 1 1 1 60 2R 15292060 15292081 GACATAGATTATACTCCACGCC 58 15292021 15292039 CCACAATCAGTCCCAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10476 FBgn0034426 FBtr0086562 3 1 1 76 2R 15172275 15172294 GGCAAAGAGGTATCTTGGTC 58 15172218 15172236 GATGAACAGACGGAGTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 2 2 2 81 2R 14996382 14996400 ATCCAGACTATCTGCAGCG 59 14996444 14996532 CAACAGGTGGCAAATACCTG 59 NA Drosophila melanogaster 61 Cyp12b2 FBgn0034387 FBtr0086609 2 1 1 84 2R 14643157 14643176 AGAGCTTGAACTACTATCGC 57 14643223 14643299 CATTCCTGACCCTGATCAG 57 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 3 2 2 102 2R 14273055 14273073 AAGAGCCTGACGTTATTGG 57 14272916 14272935 GATCATGGGAGCAGTTTACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 3 3 3 84 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181822 14181840 TGTTTCGGGATGCTAAACG 58 NA Drosophila melanogaster 61 cyp33 FBgn0028382 FBtr0086945 1 1 1 83 2R 13432986 13433073 GATAATATGAATGACTCCGAGCTC 59 13433114 13433133 GAAACTGTCCTCCTTAACGC 59 NA Drosophila melanogaster 61 CG30458 FBgn0050458 FBtr0086999 1 1 1 134 2R 13046378 13046500 CCATCTCCTCAAGATGAAATTCC 59 13046266 13046284 ATGTAGCTCTTCACAGGCG 59 NA InUTR Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 1 2 2 89 2R 12951449 12951467 AGTTAGAGGCCGTACAACG 59 12951520 12951779 TAGTGGTCTTACCAGTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 2 2 2 73 2R 12837575 12837658 AGAATCCTTTCTCCTGTAGAGAC 59 12837524 12837543 GTTTCCGTATATTCTCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112691 1 1 2 80 2R 12842209 12842230 CTCTAATACGTGAGGATTTGCA 58 12842085 12842170 CATCATCGGAATGAAAGTCCT 58 NA Drosophila melanogaster 61 Acp53C14a FBgn0034152 FBtr0087082 3 1 1 73 2R 12636020 12636039 AGATCGCCTTGTTACTAAGC 57 12635914 12635932 GAGTTCCGAACTTATGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Acp53C14a FBgn0034152 FBtr0087082 2 1 1 73 2R 12636019 12636038 GATCGCCTTGTTACTAAGCT 57 12635913 12635931 CGAGTTCCGAACTTATGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8303 FBgn0034143 FBtr0273388 2 1 1 80 2R 12483171 12483189 CGGCGTTTCTACTTCAAGG 59 12483039 12483130 GTAGTACAGGACGTTAAAGACC 58 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 3 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 3 3 5 99 2R 12247645 12247753 CAAATGTTTGTCGAGAAGCAC 58 12247814 12247832 AGATCCTGGCAAGAAACGA 59 NA Drosophila melanogaster 61 CG9068 FBgn0034106 FBtr0087138 2 1 1 80 2R 12171683 12171701 CAGACGATACTTTGACGGT 57 12171743 12171827 GGACTTCATAGCGATATTCCC 58 NA Drosophila melanogaster 61 CG8314 FBgn0034057 FBtr0087268 1 1 1 119 2R 11878048 11878066 CTCATCACTGTTCCGTCTG 58 11877878 11877967 CGATATAGAAGGTGAAGAGCA 57 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 1 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 CG30088 FBgn0050088 FBtr0273296 3 1 1 80 2R 11578970 11579051 TATGAGGCCGTATCTAAAGGT 58 11579093 11579111 GGAGAACAAGATCCACCCT 58 NA Drosophila melanogaster 61 Vha36 FBgn0022097 FBtr0087335 1 1 1 60 2R 11429588 11429607 ACTTTGGCCTACATCATCTC 57 11429630 11429648 TCAGTCGGTAGAACTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30472 FBgn0050472 FBtr0087360 1 1 1 89 2R 11310938 11311013 ATCATTGACTCTGGAGGGC 59 11310867 11310890 GTGTATGAGTTACACTCATCTTGC 59 NA Drosophila melanogaster 61 CG8160 FBgn0034011 FBtr0087389 3 1 1 95 2R 11215667 11215742 TAATGGTTGTCCTGTTCGC 58 11215590 11215608 GTGGAACGGATCTCAAACC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 row FBgn0033998 FBtr0087403,FBtr0087402 1 2 2 104 2R 11100179 11100197 TAAATTCTGCGAGTGGCTG 58 11100042 11100114 GTCACATCCGAATAAATTCCCA 58 NA Drosophila melanogaster 61 CG10257 FBgn0033985 FBtr0087408 3 1 1 108 2R 10830585 10830712 CAATGGCAAGATGTACCGC 59 10831289 10831308 CAGTTTGAACATCCAGTCGC 59 NA Drosophila melanogaster 61 Lap1 FBgn0033984 FBtr0087407 2 1 1 80 2R 10823924 10823943 ACAATTTGGAGAGCATTCCA 57 10823983 10824060 TGACAATAAGATTCCGGTTGAG 58 NA Drosophila melanogaster 61 CG12853 FBgn0040747 FBtr0087406 2 1 1 113 2R 10821034 10821052 TTTCAAGCGAGCAACATCG 59 10821199 10821217 AGCTCCTTTCTTAGCACCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10253 FBgn0033983 FBtr0087428 1 1 1 87 2R 10818716 10818734 AAGTTTCAGGGATTTCCGG 57 10818287 10818667 GTCCAAAGTCCCTAATGTAGG 57 NA Drosophila melanogaster 61 Cyp6a8 FBgn0013772 FBtr0087455 2 1 1 121 2R 10775311 10775391 TTTAGATGAAACTCTGCGACTG 58 10775211 10775231 GTATGATGACCGATTGACCAG 58 NA Drosophila melanogaster 61 Cyp6a19 FBgn0033979 FBtr0087453 3 1 1 82 2R 10766381 10766456 GGTTATCAATGAATCGCTAAGG 57 10766499 10766517 GATTACTGTGCTGGTACGG 58 NA Drosophila melanogaster 61 L FBgn0001332 FBtr0087492 3 1 1 80 2R 10369284 10382664 TTCTTTAAGCACGCCTATGG 58 10382707 10382725 GGTGAGACCATACAACAGC 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100372,FBtr0100369,FBtr0290110 1 6 7 80 2R 10184942 10185104 AACTACAACTGCAGATCCCT 58 10185147 10185165 GGTAACTACGTCGGAAACG 58 NA Drosophila melanogaster 61 CG8394 FBgn0033911 FBtr0087577 3 1 1 81 2R 10087924 10087943 ATAGGAACGAGTACCAGAGC 58 10087790 10087880 ATGCTACCTTGCCTAAAGC 57 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 3 2 2 104 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459374 9459395 AGTTCCTAATGCGATTATCAGC 58 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388,FBtr0087669 2 2 2 82 2R 9399873 9399893 GCTGCCTCAAGAACTATTGTG 59 9399937 9400022 CATGTTTCGACACCCAACG 59 NA Drosophila melanogaster 61 CG4670 FBgn0033814 FBtr0087760 3 1 1 218 2R 9121165 9121183 CCGTCTACTCATCCAACCA 58 9120046 9120983 ATGCCATTGCCTGAAAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0087817 1 1 2 82 2R 8736401 8736421 CGTTATCTACGGATTACTGCA 57 8736289 8736358 GTCAAAGTCGCCATAATTGC 58 NA Drosophila melanogaster 61 mos FBgn0033773 FBtr0087865 2 1 1 80 2R 8640217 8640292 CTATTTACAGAGATCGCTCCG 58 8640157 8640176 GCAAATGAGACTCATTGTGC 58 NA Drosophila melanogaster 61 CG8520 FBgn0033734 FBtr0087926 1 1 1 83 2R 8311540 8311558 GTCTGTACCTGTACGGCAG 59 8311603 8311680 TTCGATGAATTTGGGTACAGC 59 NA Drosophila melanogaster 61 CG30050 FBgn0050050 FBtr0289993 2 1 1 81 2R 8296474 8296493 GCCAATAATCTGGTGGTTCG 59 8296535 8296617 GTAGCCCATGTTTGGAATCAG 59 NA Drosophila melanogaster 61 wash FBgn0033692 FBtr0087989 3 1 1 60 2R 8069333 8069351 AACACCTCTTAACATGCCG 58 8069375 8069393 CATAAGCTCAGATCGCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13198 FBgn0033640 FBtr0088072 3 1 1 81 2R 7542790 7542810 CGAACGATTCATCTTTGATGC 58 7542853 7543135 CACCGTCATGTGATTCTCC 58 NA Drosophila melanogaster 61 Or47a FBgn0026386 FBtr0088111 3 1 1 197 2R 7138920 7138938 AACCTGAAGACGGAGAGTG 59 7139099 7139188 CGTGCGAACAATCGATGAG 59 NA Drosophila melanogaster 61 CG30016 FBgn0050016 FBtr0088241 3 1 1 80 2R 6762776 6762852 CACATATTGGATACTTCGGTGG 59 6762717 6762736 CCATTCCTGAATCTCGTCCA 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 2 4 4 108 2R 6730658 6730676 AACGTCATCGTCTTTCCCA 59 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 3 2 2 112 2R 6628680 6628757 AGTTTGGATGATGACTTCCTG 58 6628588 6628606 AAGATCCCAATCACTTGGG 57 NA Drosophila melanogaster 61 CG12898 FBgn0033516 FBtr0088321 3 1 1 60 2R 6294912 6294932 AACATCGAGTTCATTCTGGAG 58 6294872 6294893 AATACTCAACGTAATCGTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12898 FBgn0033516 FBtr0088321 1 1 1 60 2R 6294915 6294934 GCAACATCGAGTTCATTCTG 57 6294874 6294893 TACTCAACGTAATCGTGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088353 1 1 3 225 2R 6245024 6245042 GAGATCGCTCTCCAGATCC 59 6243981 6244000 CCTATTCCTTGCCTTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12920 FBgn0033481 FBtr0088404 3 1 1 88 2R 5957562 5957642 CTTGATCATCCTCCTTCGTC 57 5957693 5957711 GAAGGAGCATCATAGTGCT 57 NA Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 3 2 2 80 2R 5915135 5915217 GGAACCTCAAAGTGAGAGC 58 5915261 5915279 TAAACACCTGTTTCCCGAC 57 NA Drosophila melanogaster 61 CG30008 FBgn0050008 FBtr0088380 2 1 1 82 2R 5777820 5777839 CTCAAGCGACTTATCTTGCT 58 5777883 5777961 TCCGTAATGTACAGGACCTC 58 NA Drosophila melanogaster 61 CG1671 FBgn0033454 FBtr0088373 3 1 1 169 2R 5735574 5735592 GTTCATGTTCTGATCCGCG 59 5735781 5735802 ATTGAGGCAGTAAAGATGATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 2 2 2 81 2R 5491677 5491759 TCGTTCAGGAATATTCGCC 57 5491804 5491822 AATGTGACCCATTCGTGTG 58 NA Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 2 2 2 64 2R 4996509 4996591 AGCTGGTGGTGATTCAGAC 59 4996463 4996481 CGGATCAGGGTACTGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14752 FBgn0033307 FBtr0088691 2 1 1 195 2R 4478576 4479074 TTCTTTGGCAAACACGAGC 59 4479233 4479251 GGATCTCCTCGTGATGGAC 59 NA Drosophila melanogaster 61 CG30360 FBgn0050360 FBtr0273322 3 1 1 82 2R 4353753 4353777 GATTCGTGAAGATAATCAGTAGCTG 59 4353815 4353913 CTGATCGTGATTTCCCATCAC 59 NA Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766,FBtr0088765 3 2 2 61 2R 4257225 4257244 ACTACAGCAGTCAGTCTTCC 59 4257183 4257201 CGATACCTGATCGCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809 3 1 2 82 2R 4047503 4047574 TACAAGACGGATGACGGTC 59 4047439 4047460 AGGACATAGAAGGAATTCGGAG 59 NA Drosophila melanogaster 61 CG18316 FBgn0033261 FBtr0088782 2 1 1 60 2R 3994240 3994261 ATACTGGCCTCCAATCATATGG 59 3994280 3994300 TGAATATTTGAAAGGACGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sut2 FBgn0028562 FBtr0088778 1 1 1 81 2R 3975298 3975317 CATCTACCTGATTGGAGGCA 59 3975361 3975435 AACCAGACATCCCTTACGG 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0300368,FBtr0088952 3 3 3 68 2R 3470142 3470161 TATCTGGAGATGCTTGCCTC 59 3469834 3469852 ATCAATGTACTCCCGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088905 3 1 2 232 2R 3421203 3421221 AACATCTACGACGTCACCG 59 3423018 3423036 GAACTCTCCTCGGTTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG3420 FBgn0033100 FBtr0086135 2 1 1 171 2R 2644564 2644582 AGTAGTGGTACGACCTTGC 59 2644349 2644430 GAACTGTAGCATGCCTTGAG 59 NA InUTR Drosophila melanogaster 61 CG33919 FBgn0053919 FBtr0091923 2 1 1 82 2R 2511641 2511660 GTATGGCGTGATAATGTGGA 57 2511516 2511596 GAGCTATAAGATGGCCCGA 58 NA Drosophila melanogaster 61 CG8335 FBgn0033069 FBtr0085990 3 1 1 119 2R 2088519 2088593 ACAATCAGGTTATGGGCAC 57 2088675 2088694 CCATATCCAGATCAATGCGT 57 NA Drosophila melanogaster 61 CG8335 FBgn0033069 FBtr0085990 1 1 1 80 2R 2088456 2088475 TGTATCTAAAGCCGTTGGTG 58 2088518 2088592 TGCCCATAACCTGATTGTC 57 NA Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 2 2 2 80 2R 1896998 1897893 TGTGTCCAGATCGAGAAGC 59 1897935 1897955 CAAAGACGTTCTGTCGATCTC 59 NA Drosophila melanogaster 61 CR33319 FBgn0053319 FBtr0089858 3 1 1 217 2L 20929028 20929155 GTCCACAGATCTGTCAACG 58 20929331 20929354 CACATAGTCGAGTCTATAAAGACC 58 NA DesignRelaxed Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0081385 2 2 3 100 2L 20647747 20647765 TTTGAGACTTCTTGGGACC 57 20648001 20648197 CTGCATTATAAGTGTGGAAACC 58 NA Drosophila melanogaster 61 snmRNA:158 FBgn0065104 FBtr0091750 1 1 1 60 2L 5206231 5206251 TCAAGAAGGATCACTCTACCC 58 5206273 5206291 ATCCCATCTAACCCTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3635 FBgn0032981 FBtr0299879 1 1 1 80 2L 22175592 22182745 ACAAAGTTACGGCTACGTC 57 22182788 22182807 GGATGTAGTCATCATGGGTG 57 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 2 3 3 91 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759240 AAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 His1:CG33858 FBgn0053858 FBtr0091862 1 1 1 60 2L 21526674 21526693 AGTTGAGAAGAAAGTGGTCC 57 21526716 21526734 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39b FBgn0041245 FBtr0081522 2 1 1 134 2L 21368924 21368942 CCAGCAGGTTCTGGTAGAG 59 21368177 21368827 CCAATCAAGACACTCTGTCG 58 NA Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 1 1 1 100 2L 21164686 21164764 GATAACCAGGAAACAGCAGG 58 21164827 21164845 GTAAAGTGTTCGGCGACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470,FBtr0081471 3 2 2 83 2L 21159139 21159157 GACAAATGGTGACGGTGTC 59 21159278 21159296 TGTACTGATGCAGTCGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33511 FBgn0053511 FBtr0091451 3 1 1 83 2L 21081403 21081422 TGGGTTTGGACAAGAATCTC 57 21081261 21081357 AGTCAAACTTAAGGGCTGC 58 NA Drosophila melanogaster 61 CG9265 FBgn0032910 FBtr0081507 1 1 1 90 2L 21059603 21059621 TACGAACATCCGAACCACC 59 21059442 21059549 CAGTGTGGGTACCCATCTG 59 NA Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290305 3 1 2 65 2L 21051804 21051823 CAAATACGCGACCAATTGAC 58 20967731 21051776 AATTATGGACGATGCTCGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 3 2 2 91 2L 20930076 20930153 CCTTAGAAGAGGTGCACCTC 59 20930004 20930023 TACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 CG14400 FBgn0032896 FBtr0081449 1 1 1 60 2L 20857291 20857312 TACGAGCGATATAAGAGTGGTG 59 20857252 20857271 GTTTAGCCATGTATCCGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14402 FBgn0032894 FBtr0081425 3 1 1 60 2L 20849841 20849859 CTTCCTTGATGGTCACGAG 58 20849880 20849901 GTACAATTTACCGGTACAGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oseg5 FBgn0032891 FBtr0290042 3 1 1 87 2L 20833677 20833695 ACAGCATCTGGTATTGTCC 57 20833447 20833626 CCAAATTCCGTCGTATCCA 57 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081353,FBtr0081354,FBtr0081352,FBtr0301884 1 5 5 174 2L 20343665 20343754 AGTTTCAGGACGACGATCTC 59 20343891 20343909 CAATCTTGTCGTGCCTGAC 59 NA Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 1 2 2 99 2L 19506352 19507499 AGCACTGGAGGTATTTCGAC 59 19506272 19506290 TGATGATCTCCGTTGCCAG 59 NA Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 2 2 2 79 2L 19417485 19417504 TTACATTGCTGGTCATAGCA 57 19417545 19417633 ACCAAACGTATTTCCTTCGT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 l(2)37Cg FBgn0086447 FBtr0081161 2 1 1 69 2L 19133145 19133169 CAGAGCCATAGATATACTTAAACGG 59 19133100 19133121 CGTAACGATTGTATGATCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 3 2 2 107 2L 19056065 19056262 AGCACGATAGTGTCAACGA 59 19056331 19056351 CCTTGACTCGATGATTGTGTC 59 NA Drosophila melanogaster 61 Side FBgn0032741 FBtr0081141 3 1 1 69 2L 19029054 19029072 GGACATCCTGGAGCTAACC 60 19029105 19029311 TTTGTTAACCGTGGGATCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10641 FBgn0032731 FBtr0081185 3 1 1 86 2L 18986729 18986747 AAGTGGTCAACGTCTACAC 57 18978759 18986682 CCGTATCGTATGTATTGAAGGT 57 NA Drosophila melanogaster 61 mRpL13 FBgn0032720 FBtr0089318 2 1 1 296 2L 18858455 18858962 CCACCCAATGAATGACTGC 59 18858177 18858195 CGGATTTGATTCGTGACGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG42502 FBgn0260228 FBtr0300635 2 1 1 60 2L 18810679 18810832 TTGAAGCAAGCAAGATTGGG 59 18810638 18810657 AGTTTCCAGTACGTGATCCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42490 FBgn0086200 FBtr0300445 2 1 1 80 2L 18666611 18666697 ACTTACTCATGTCTACTACTGTCC 59 18666735 18666754 TTTAGCAACAAGTCCATGGC 59 NA Drosophila melanogaster 61 MESR3 FBgn0032694 FBtr0081073 2 1 1 162 2L 18631765 18649606 GACCGGAAACTTAAACCCG 58 18660313 18660331 ATGGAGAATCAGCTCGTCC 59 NA InUTR Drosophila melanogaster 61 Acp36DE FBgn0011559 FBtr0081054 2 1 1 80 2L 18358857 18358878 ATATTTGGAGTAAACCCACAGC 58 18358739 18358817 AATCACTTGTGAAGACTCGG 58 NA Drosophila melanogaster 61 CG31787 FBgn0051787 FBtr0081055 2 1 1 60 2L 18285203 18285222 GCCAGGAAATGTTAACCGAC 59 18285162 18285186 ACGTAACTATCGATACCAGTATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5131 FBgn0032644 FBtr0080984 3 1 1 168 2L 17485072 17485091 TCACATGTTCGACTACTGCA 59 17485222 17485313 CTTGACGCAGTTCTGATGC 59 NA Drosophila melanogaster 61 CG18563 FBgn0032639 FBtr0300902 1 1 1 118 2L 17457682 17457764 GAGTCTGCATCATCTTCTACAG 58 17457585 17457603 ATGGGTACATCAGGTTCCG 59 NA Drosophila melanogaster 61 CG6639 FBgn0032638 FBtr0081004 3 1 1 85 2L 17455646 17455738 AGTTCTACGAAAGCCTGGA 58 17455579 17455600 GTGCATTTATTCCGTTTACTCC 58 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 1 1 1 60 2L 17012697 17012715 TTATGTTGCCGTGGAAAGG 58 17012594 17012674 TAGTCCACATTGCGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cas FBgn0022213 FBtr0080930 3 1 1 93 2L 16822638 16822724 CGTAATGAAAGCCATTATGCGA 59 16822566 16822584 GAGAATCTCGGTAAGCCGT 59 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0301144 1 1 3 67 2L 16511438 16519979 TTCTTCAAACATGGGCCTG 58 16511389 16511407 TATTCCAACTGTCCAGCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG42266 FBgn0259151 FBtr0299599 3 1 1 80 2L 16339819 16339896 CTGATCGTAGTCAACAAGAACG 59 16339760 16339780 AACTGAATATTGTTGGCCTGG 59 NA Drosophila melanogaster 61 CG31819 FBgn0028893 FBtr0080821 3 1 1 81 2L 16213017 16213134 TGCCTATCAGTCCATGTACTC 59 16213175 16213195 TCGACATTGATGAATTACGCG 59 NA Drosophila melanogaster 61 CG11865 FBgn0028947 FBtr0080753 3 1 1 62 2L 15617183 15617201 TGGTCTACAGTTATGCCGG 59 15617294 15617315 CCATTGCACTTTCAATACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 1 2 2 89 2L 15230347 15236615 GTGAATGTCATCATGGGCG 59 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 CG4140 FBgn0028535 FBtr0080728 3 1 1 130 2L 15007153 15007220 ACAAGAACCCACAAAGCAG 58 15007041 15007060 CGTGTATCCGTCGTTATCCT 59 NA Drosophila melanogaster 61 CG4218 FBgn0250844 FBtr0080662 3 1 1 120 2L 14548737 14548755 AATACTACAGCGGGTGTGG 59 14548239 14548653 GAAGATCGCCAAACTCCTG 58 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 3 2 2 80 2L 13986197 13986276 TAAGGCTGTTAGATCTATCGAGC 59 13986139 13986160 GATCGTTCAATTGCTTCAATCC 58 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942 3 1 2 100 2L 13791153 13791224 CCATCCGCAGATAAACCTC 58 13791288 13791306 GAACAACCTTCCGGAATCG 58 NA Drosophila melanogaster 61 TM9SF4 FBgn0028541 FBtr0080532 1 1 1 106 2L 13773315 13773395 CTATACGGGTCTTATGGTGCT 59 13773463 13773481 AGTCGATCTTCACAGCTCC 59 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 1 2 2 68 2L 13668755 13668773 ATATTCCGTCCGGAACTGG 59 13668805 13668881 ATAGTCCTCCACAGTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Nnp-1 FBgn0022069 FBtr0080473 2 1 1 60 2L 13365041 13365059 TTTAACAGCAAGAGACGCA 57 13364999 13365021 TCTGGTAAGTCTCAAAGATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5867 FBgn0027586 FBtr0080449 3 1 1 111 2L 13238868 13238886 ATGGTCACACCTATCTGCG 59 13238960 13239041 AAGATGACATCGTTCAGCAC 58 NA Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 2 2 2 113 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051539 12051558 CACATTATCGGCCATCTTGC 59 NA Drosophila melanogaster 61 CG42471 FBgn0259961 FBtr0300307 1 1 1 80 2L 11753873 11753946 TTTATTCCACTGTTTGCAGGC 59 11753813 11753831 GAGTACGCTCGTTGTAGCT 59 NA Drosophila melanogaster 61 CG4788 FBgn0032354 FBtr0080202 2 1 1 60 2L 11179762 11179781 TACTCCTCAAATCCATCCGA 58 11179802 11179822 TCTAAATGGTACTGCACCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0080159,FBtr0113035 1 2 2 60 2L 11017818 11017838 CATCCGCATTCTTCGATTACC 59 11017857 11017878 ACCTCATGTAGATCCATATCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 2 1 1 79 2L 10859570 10859588 CATTTGGAGGTGGCTTCAC 59 10859630 10859708 TTCAGTGAAACCTTTGGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31872 FBgn0051872 FBtr0080099 3 1 1 93 2L 10642856 10642875 ATCTGCAACAAGCTTATCCC 58 10642928 10643007 GGGATAGTGTCATATTGAAGCT 57 NA Drosophila melanogaster 61 CG5168 FBgn0032246 FBtr0080020 2 1 1 83 2L 10424863 10424881 CAACTGTCAGCTTTGCTCC 59 10424928 10425007 TGATGCTGTCGTATTCCCA 58 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 3 2 2 119 2L 10339600 10339618 ATCTGCGTAACATCAGCAG 58 10340231 10340324 ACATACTGCTCTCACTTAACAC 58 NA Drosophila melanogaster 61 Ror FBgn0010407 FBtr0079978 2 1 1 80 2L 10252365 10252384 TCTCACCATGAACGATTTGG 58 10252424 10252501 CAATTTGCGTTCATATCCTTGG 58 NA Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 2 2 2 81 2L 10229120 10229197 AGAAGCTATACTCGAACACG 57 10229058 10229076 TTTGTTATCTGGCTCAGGG 57 NA Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 2 1 1 95 2L 10191184 10191256 GTTGAGGAACGAATGCCAC 59 10191107 10191125 ATGCTCCTCCAGACAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 2 2 2 97 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380309 8380450 CTTCTCAGTGGCATAACGC 59 NA Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 3 2 2 92 2L 8372744 8372891 TATATTATGGACCCACGGTGG 59 8372945 8372963 TCTTGCCCAAATCCAAGTG 58 NA Drosophila melanogaster 61 CG34134 FBgn0083970 FBtr0110894 1 1 1 60 2L 8190503 8190521 CTTAGTCGCACTCAATCGG 58 8190461 8190481 CTTGACGATTGAACTTGACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12375 FBgn0031987 FBtr0079642 3 1 1 137 2L 8126833 8126852 CGCCTTTCTTGATAGGACCA 59 8126657 8126675 TGGTAACAGCCGGAATCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7227 FBgn0031970 FBtr0079551 1 1 1 80 2L 7995679 7995763 GGCAAATGGTACTGATAACCC 59 7995619 7995639 ATGTTGAGAAGACCGGATCTC 59 NA Drosophila melanogaster 61 xl6 FBgn0028554 FBtr0079368 3 1 1 190 2L 6919682 6919700 AAAGTATGCTAGGTCCGGC 59 6915387 6919528 TGAATGAGTTGCTTCTGCG 58 NA Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336,FBtr0079337 2 2 2 91 2L 6775883 6775974 ATATACCCAAGTTTGACGAGAG 57 6776026 6776044 GATGATCTCCTCGTGAGCT 58 NA Drosophila melanogaster 61 CG11329 FBgn0031848 FBtr0079319 1 1 1 60 2L 6677379 6677400 CGGAGATTAATGACACCATCAG 59 6677340 6677359 ACCGGATACTTGATGAAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 1 3 3 183 2L 6049172 6049190 AACTACTGCTTCGAGATCG 57 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079151 3 1 2 296 2L 5923471 5923543 AAAGTGTCAGTGAGCAGCA 59 5923193 5923211 GGAAGCGCTAACTCTTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tomb FBgn0031715 FBtr0079127 1 1 1 240 2L 5536562 5536580 CACCAAGTTCTGTCGATGC 59 5536278 5536296 TAGGGTATACTTTGGCGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 TpnC25D FBgn0031692 FBtr0079063 2 1 1 134 2L 5218739 5218758 GTTACATCACCACCTCAACG 59 5218852 5218935 CCATGAATTCATCAAAGTCCAC 58 NA Drosophila melanogaster 61 Marcal1 FBgn0031655 FBtr0078992 3 1 1 80 2L 4957679 4957759 TGGAATCCTAGCACTCTTGC 59 4957801 4957820 CAGATAGCGACAAATCACCG 59 NA Drosophila melanogaster 61 CG31776 FBgn0051776 FBtr0077522 3 1 1 80 2L 3470611 3470630 AAGACTTCTATGCCGAACTC 58 3470672 3470744 GTTTCCGGCAACTTATAGGT 58 NA Drosophila melanogaster 61 Ptpa FBgn0016698 FBtr0077589 2 1 1 95 2L 3377116 3377189 CCAAGCAGCAGGTAAACTG 59 3377248 3377266 ATTAAATCGTGGAAGGCGC 59 NA Drosophila melanogaster 61 gkt FBgn0260817 FBtr0077574 1 1 1 81 2L 3161780 3161800 AAACTCGAATATCCAACCCTG 58 3161843 3161921 CTCGCCAGTCACAAATCTG 59 NA Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 2 2 2 83 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025880 3025900 TGAGTCGTTCTGAAGTAGAGC 59 NA Drosophila melanogaster 61 CG9962 FBgn0031441 FBtr0077743 1 1 1 60 2L 2647055 2647075 CTTTGTTGTAAAGTGCAGTCC 58 2647015 2647033 AAATGAGGACGTAGCCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15394 FBgn0250835 FBtr0113016 3 1 1 109 2L 2592136 2592154 GCTAGCAAACAGGTTGCTC 59 2592227 2592304 GTCTTTGCCCTGGGATAGG 59 NA Drosophila melanogaster 61 VGlut FBgn0031424 FBtr0077769 1 1 1 80 2L 2407029 2407049 CGAATGGAATTGGTACTCTGG 58 2407091 2407172 AACACCCGGTAGGATTAGC 59 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868 1 1 3 80 2L 1986847 1986868 TATGACGCTTAAGGACATTGTG 58 1986097 1986808 CATGTTGATACTCTGTTCGCT 58 NA Drosophila melanogaster 61 CG17648 FBgn0031364 FBtr0077887 1 1 1 60 2L 1752651 1752670 ATAAGCAGGAGTACGCTCTG 59 1752693 1752711 GTCATGATGTCCTCCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eno FBgn0000579 FBtr0302115 1 1 6 215 2L 1727656 1727674 AAATTTGTGCAGATCCGCA 58 1727372 1727390 AAGTATCTCCCTACAGCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18317 FBgn0031359 FBtr0077910 1 1 1 80 2L 1717810 1717893 TATCAAGTCCAAGTTGCTAGAG 57 1717751 1717771 ATCATGAACTCCAGAAAGTCG 58 NA Drosophila melanogaster 61 CG33128 FBgn0053128 FBtr0077930 1 1 1 60 2L 1495260 1495278 ATATCGGAACGGGCTTCTG 60 1495299 1495320 AATTCGGAGTAGTATTGACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 3 2 2 80 X 16576145 16576243 CCACGATATCCTGTATCTCGA 58 16576085 16576104 AAGTAGTTCCGGATGTCCTC 59 NA Drosophila melanogaster 61 Ste12DOR FBgn0044817 FBtr0073856 1 1 1 60 X 13894395 13894413 GCAGGATACGTTCAACCAG 58 13894435 13894455 CAGGATCACGTCCAGTATCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10920 FBgn0029963 FBtr0071150 1 1 1 60 X 7747443 7747464 GTAGTGGTTATAACACATCCCT 57 7747404 7747422 CCACAAACTGGGCTATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snmRNA:331 FBgn0065099 FBtr0091929 1 1 1 60 3R 3300642 3300664 CTGCTTATCAGATCTGTTCAGAG 58 3300604 3300625 GAATTACTGGGAAACACAAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9733 FBgn0039759 FBtr0085638 3 1 1 84 3R 26071296 26071315 TCAATCGGCGATATGTCCTC 59 26070408 26071249 AGTCTCACCGACACAAGTG 59 NA Drosophila melanogaster 61 CG13597 FBgn0039124 FBtr0084525 3 1 1 184 3R 19718991 19719073 AGCTAATATTAGGAGTTGGGTG 57 19718828 19718847 GGACTTGAGCTCTTCTAGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31213 FBgn0051213 FBtr0083824 2 1 1 85 3R 15801197 15801594 GAGTTAATGTACTTGGGACTGC 59 15801640 15801658 ATAGTCCAGCGACAATGGG 59 NA Drosophila melanogaster 61 CG33654 FBgn0053654 FBtr0091633 2 1 1 139 3R 5408793 5408811 AGTTCACCAACCTCCAGTG 59 5408580 5408690 GTAGCCGTTAAATCGTGGC 59 NA Drosophila melanogaster 61 CG14564 FBgn0037131 FBtr0078435 2 1 1 75 3L 21750501 21750519 ATACCGAGCCACTTAGCAC 59 21750556 21750576 CGGATGGACAATTCCAAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13813 FBgn0036956 FBtr0074827 1 1 1 80 3L 20225535 20225553 CGCCACATGCTGTTATCTG 59 20225594 20225675 CAGGTTGATCAGAATTAGGCTC 59 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 3 2 2 144 3L 17548149 17548167 CAAAGACGACAGGATGGTG 58 17547967 17548043 TTGACTTGTGATCCGTATGAG 57 NA Drosophila melanogaster 61 CG8100 FBgn0036410 FBtr0075779 1 1 1 81 3L 14076897 14076916 CTTTGCTTCACGAGGAACTC 59 14076960 14077077 TATCTCCAGGTGCCTTCCT 59 NA Drosophila melanogaster 61 CG1332 FBgn0035514 FBtr0073224 3 1 1 80 3L 4219277 4219295 GAACACTGAAGCCCATTGG 59 4219337 4222202 ATGCAATGTGACCATGATAGG 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 1 5 5 80 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770666 AGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 Rae1 FBgn0034646 FBtr0071683 3 1 1 84 2R 17547086 17547104 GTTAAGACGTGCCACATGG 59 17546971 17547039 TGTCCCAGAACTTTAGGGTC 59 NA Drosophila melanogaster 61 otp FBgn0015524 FBtr0290289 2 1 2 96 2R 16773851 16773869 TGAACAGTGGCCTAAACTC 57 16772861 16773791 ATCATGGAGTCGCCTAGAG 58 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 3 2 2 87 2R 14659388 14659472 CAAATTCAGATTGGGCAATGAG 58 14659520 14659538 ATCAAACAGGTGCAAGTCG 58 NA Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 3 2 2 90 2R 13668853 13668871 ATTCACACCTGACGGTCAG 59 13668720 13668738 AGTTGATCGATGAGGGCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 2 2 3 103 2R 9928272 9943273 CCATGGTATTCAGGTGTCG 58 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 3 2 2 143 2R 5010059 5010134 AGGAATTTGTCAAGCTAAACCC 59 5010238 5010256 TCAAATCCCGCGGATAGAG 59 NA Drosophila melanogaster 61 CG6201 FBgn0032343 FBtr0080229 1 1 1 85 2L 11112426 11112505 AACCACCAGATAGCACGAC 59 11112359 11112377 TTATACCCACGAAGGTCCG 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 2 5 5 80 2L 9537734 9537817 GGATTATTGCTACGACAAATGC 58 9537855 9537876 TGTTTCTTAGACTTGGTCTGTG 58 NA Drosophila melanogaster 61 Mcr FBgn0020240 FBtr0079543 3 1 1 81 2L 8079817 8079835 AGGGATTTGACAATCCCGT 59 8079659 8079772 TTTGATTGACGCGATAGCC 58 NA Drosophila melanogaster 61 CG7742 FBgn0031690 FBtr0079092 1 1 1 85 2L 5213318 5213396 CATGACTACGATATTGAGTACTGG 58 5213256 5213275 TCCTTGAAGACCAGTTTGTC 57 NA Drosophila melanogaster 61 CG3887 FBgn0031670 FBtr0079000 1 1 1 122 2L 5011328 5011422 CTTTACTGCTACTCCTGCG 58 5011507 5011526 GTAATAGTTTAGACCCGGCG 58 NA Drosophila melanogaster 61 CG4577 FBgn0031306 FBtr0077957 3 1 1 123 2L 1139058 1139132 GAGCGAAGAGTGAGTAGCT 58 1139219 1139237 TCCGATTGGCATAGGTCAG 59 NA Drosophila melanogaster 61 Pkg21D FBgn0000442 FBtr0078042 3 1 1 96 2L 788167 788250 GGATTTCAGTGATAAGCAGCA 58 788091 788109 TGAATCTACCAGTTCCCGC 59 NA Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064,FBtr0078065 2 2 2 78 2L 545495 545516 AATGGTGGTCACCTACATAGAC 59 545555 545824 TCTCCATCGGAGATTCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Cyp12d1-p FBgn0050489 FBtr0089419 2 1 1 60 2R 7009281 7009300 ATCTTCAAGATCAGCCTCCG 59 7009180 7009263 CTCCTCCGTTATACTAGATTTAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Or59a FBgn0026384 FBtr0072023 2 1 1 99 2R 19327793 19327874 CATATTCTAGAACTATTCCGACGC 59 19327717 19327735 CTGCTAAACCGATGCACAC 59 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997,FBtr0080996 3 2 2 84 2L 17487191 17487212 AAAGTATCCATTAACCGTGCTC 58 17487063 17487146 TGTTAGGTGAACCTCCCTC 58 NA Drosophila melanogaster 61 CG5122 FBgn0032471 FBtr0080431 2 1 1 135 2L 13130641 13130660 TTACCCTGAAATAAGCACCC 57 13130758 13130836 GTATCCGGTGCTTACAGAG 57 NA InUTR Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 3 3 3 81 3L 6190640 6190720 CATCAGATGATACAGAAGATTCTGC 59 6190758 6190777 GGAATTGCTCCACAAATCGA 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 3 4 4 80 3L 2499615 2499700 CCACGATGAGGTTATGGCT 59 2499553 2499571 TGGATTTCCCGGATGAGTC 59 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 2 2 2 61 2R 17974259 17974277 TCAAGAATGCCAATCCCGA 59 17974054 17974234 GCTATTCAGCTCAAGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 1 2 2 120 3L 2373059 2373138 TGTAACATTGCCCAGGGAG 59 2372957 2372975 CAGAAATCTGCGGAAACCG 59 NA Drosophila melanogaster 61 XRCC1 FBgn0026751 FBtr0070763 2 1 1 80 X 5225432 5225451 GACACAGCGATTCAATACCG 59 5225494 5225572 ATCGGGATTCTGTATGCCA 58 NA Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 3 1 1 171 2R 14858436 14858454 CATCGACATGATGGAGAGC 58 14858216 14858301 CTTCCAATCGTTTAGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 FucTC FBgn0044872 FBtr0299926 2 1 1 64 X 22411731 22411749 GAAACTGCGGAACACTCAG 59 22411148 22411166 GTCAGTGTCCAACATCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14199 FBgn0040890 FBtr0300214 3 1 1 139 X 19388864 19388945 TTGCTAAATCATGAGCGCC 59 19388668 19388761 AGAAGGTGCCCATGAATCC 59 NA InUTR Drosophila melanogaster 61 CG12203 FBgn0031021 FBtr0074712 2 1 1 90 X 19386973 19386991 AAATCGAGTTCGACAACCG 58 19387104 19387122 AACTGCACGTTCATGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6290 FBgn0030921 FBtr0074563 2 1 1 63 X 18331608 18331626 ACAGAATCCGCTAGAGTCG 59 18331653 18331671 TGCCTCCGCTATATTTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beta-Spec FBgn0250788 FBtr0074454 2 1 1 80 X 17562406 17562540 TTGGGATAAGGTATACATGGC 57 17562579 17562600 TCGGGATTACTCTTATAACCCT 58 NA Drosophila melanogaster 61 Eo FBgn0030597 FBtr0073975 1 1 1 60 X 14811632 14811652 GGAATGATGCCATTGTTTCTG 58 14811592 14811610 GATCCCGTGTACTGTTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsp1alpha FBgn0002562 FBtr0073651 3 1 1 62 X 12384573 12384591 AAGAGTACATTGCGATGGG 57 12384617 12384702 GATCGAAGTGCGTGTAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1394 FBgn0030277 FBtr0073467 2 1 1 61 X 11064511 11064529 TTTCGTACTGGAATGGCCA 59 11064468 11064486 CATGAAGTCACCCATCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spri FBgn0085443 FBtr0112690 3 1 4 85 X 10386359 10386546 TGAATTAATAGCTGGTCACCC 57 10386294 10386312 ATTGAAGGGTGTATGCCCT 58 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236,FBtr0071238,FBtr0071237 3 3 3 81 X 8382563 8382645 TTTGAGAAGGAAATTCCTGGC 58 8382502 8382524 GTTCTGTCATGGTTCCATATGTC 59 NA Drosophila melanogaster 61 CG15337 FBgn0030014 FBtr0071160 1 1 1 95 X 8054229 8054247 CAAGCCCAGAACCAAACTC 59 8054375 8054393 ATAGGACGTGAGGATACCG 58 NA DesignNoJunction Drosophila melanogaster 61 Ykt6 FBgn0260858 FBtr0071093 2 1 1 100 X 7814824 7814932 AGTTCATGACTTTCGCTTCG 59 7814995 7815013 CCGCACATAGACATGACAC 58 NA Drosophila melanogaster 61 Ir7d FBgn0259190 FBtr0299674 3 1 1 80 X 7772528 7772546 CGTCCAGAATGCTGAACAG 58 7772377 7772397 GATGTCAGCAATACGATAACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0300836,FBtr0071078 2 2 2 60 X 7607543 7607564 GAAAGAAGGAGAATGTCTCACC 58 7607504 7607522 GAACCTTCTTCGGCAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 3 2 2 118 X 7235526 7235615 ACTTGTTTAAGGCTGTGGAC 58 7235695 7235714 TATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 1 2 2 137 X 6586546 6586564 ATCTATGGCGATGAGGGTG 59 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487,FBtr0070591 3 3 3 62 X 3372661 3372680 CATCCATTCTGTGGATACCA 57 3372557 3372575 CTTCCACCACCTTGATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14420 FBgn0029643 FBtr0070553 1 1 1 141 X 2833530 2833548 TCAACTGAGTCTGGCTGTG 59 2833755 2833773 CTTGTTGGCAATCGACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34052 FBgn0054052 FBtr0100107 2 1 1 64 X 2216173 2216192 TACAGTAAGGACTGCCTGTG 59 2216064 2216082 CAGGGCAGTTCCAATTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pcx FBgn0003048 FBtr0070395 1 1 1 80 X 2121249 2121359 ACAGTCCTGGATATTAGATCCC 58 2121400 2121418 TGTTCAATGCCCAGATCAG 57 NA Drosophila melanogaster 61 CG4061 FBgn0025630 FBtr0070330 2 1 1 94 X 1966684 1966702 TTATTGCGGTTGCCATGAC 59 1967168 1967186 CCGTGTCCAAAGTAGGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11381 FBgn0029568 FBtr0070203 1 1 1 141 X 1097898 1097970 CTCAAAGCCGCAAAGATCC 59 1098075 1098093 ATGGGAGATACTTGTGGGC 59 NA Drosophila melanogaster 61 Su(Ste):CR42415 FBgn0259846 FBtr0300143 2 1 1 60 U 6756973 6756992 TCTGCCCTAAATACTTGGCT 58 6756932 6756953 CTCGAATGAGTGCTGATATGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42405 FBgn0259836 FBtr0300133 1 1 1 60 U 4548734 4548753 GCAATTAAACAGATTCCGCA 57 4548693 4548712 TGAGGTGTATTTGTAGGTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 3 1 1 61 3R 15212701 15212813 GCTACGACTCAGTTTCCAC 58 15212835 15212856 AAAGTTTCCAAGCTGAGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CR31339 FBgn0051339 FBtr0083867 3 1 1 60 3R 16020661 16020680 ATCAGGGTTCTTGTGACTGG 59 16020703 16020721 AATCATGGTGCCATCTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smvt FBgn0039873 FBtr0085860 1 1 1 89 3R 27586673 27586694 GACCTTCATCTTCATATTGACG 57 27586546 27586623 TTAAATCCGGTCACCTGTG 57 NA Drosophila melanogaster 61 awd FBgn0000150 FBtr0085864 3 1 1 142 3R 27571579 27571597 TTTCATCATGGTCAAGCCC 58 27571276 27571294 GATCAGCGTAGTGCTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 2 2 4 80 3R 26742432 26749147 AGAAACTCAGAATTTGGGCC 58 26749187 26749208 TATCCAAACTATTTGCTACGGC 59 NA Drosophila melanogaster 61 CG15526 FBgn0039744 FBtr0085562 2 1 1 118 3R 25881878 25881980 CGACATCAAACTTAAACTTCGG 58 25882059 25882077 TCTCCAGTGTGGGTTTCTC 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 3 4 4 86 3R 25325968 25326048 CTGCTATCAGGAAATGTATTCCG 59 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG14508 FBgn0039651 FBtr0085406 2 1 1 269 3R 25029765 25029783 GCCATCAAAGGAGGAAGTC 58 25029333 25029351 CGATTTCCAGTAAAGCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 3 1 1 60 3R 23410079 23410355 AACTCGCAAGGAAGAATGG 58 23410379 23410397 TGATCAGGTCCAACTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5984 FBgn0039500 FBtr0085181 3 1 1 242 3R 23072868 23072952 AGTTCTTCAGTGCCCATCTC 59 23072645 23072663 GATGTAGTCACCGGGATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106 3 1 2 112 3R 22940111 22940131 TGATAAGCGTCGTTATCAAGG 58 22940205 22940280 GATCCTCTTGCATTCCCAG 58 NA Drosophila melanogaster 61 CG34027 FBgn0054027 FBtr0100082 1 1 1 82 3R 20932774 20932792 ACCCATGGAAACATTGGAG 57 20932657 20932731 TCATTATCGTTACCTGGAAGTC 57 NA Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0302167,FBtr0084715 3 2 2 130 3R 20743977 20744353 GACATAGCCGCTACCTAGTG 59 20744446 20744464 CATGTCGTTTGCTCGAGTG 59 NA InUTR Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867,FBtr0084620 1 2 2 113 3R 20212173 20212192 CTATAATGGACGTGACTGCA 57 20212017 20212098 TTTGGCAAGCTGAATATGGT 58 NA Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 2 1 1 88 3R 19758876 19758894 TCACCAAGGTCTATAGCGG 58 19758736 19758824 AAGAGCCTTGCGAATACAG 57 NA DesignNoJunction Drosophila melanogaster 61 Ir94e FBgn0259194 FBtr0299678 2 1 1 80 3R 19231643 19231661 TGTTTAGGAATTGCTGGCG 58 19231702 19231781 TGTAGAAAGTCGAGGTAGTCTC 58 NA Drosophila melanogaster 61 CG13836 FBgn0039060 FBtr0084370 3 1 1 60 3R 18995889 18995909 AAGGATAAGGCCATCATTGTG 58 18995928 18995949 CCTTGGAATCGTTGTTATTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13841 FBgn0040588 FBtr0084316 3 1 1 81 3R 18593299 18593383 TCAGAGTTACTACGTGCCT 57 18593236 18593254 TAAAGCACTTTGGTGTCGG 58 NA Drosophila melanogaster 61 CG4721 FBgn0039024 FBtr0084317 1 1 1 60 3R 18591715 18591736 CCAACTATTCGATAGACATCCT 57 18591676 18591697 CCCATATAGGCTTTGATGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33110 FBgn0053110 FBtr0084264 3 1 1 81 3R 18398291 18398393 GGTATATGTTCTACGAGCACCT 59 18398434 18398453 CTATCGGAGTAGTCAACCGG 59 NA Drosophila melanogaster 61 dnd FBgn0038916 FBtr0084151 3 1 1 107 3R 17711941 17712022 GGACATAACCACGGTAACG 58 17711852 17711871 GGACGTATCTTCCATTGACC 58 NA Drosophila melanogaster 61 CG7922 FBgn0038889 FBtr0084109 2 1 1 160 3R 17309567 17309681 AACACTTTCAGGCAAACCC 58 17309805 17309823 GGTGAGAGCATAGCTTGCT 59 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258 2 1 3 105 3R 16956694 16956788 GTCTACAGAAAGTGCTGCC 58 16956857 16956875 TCTGGCAAGAGTCTTACCC 58 NA InUTR Drosophila melanogaster 61 CG5697 FBgn0038846 FBtr0084001 2 1 1 160 3R 16842141 16842234 AACTGCTGACTATTCCTACGG 59 16842356 16842374 AGACACTGTCGGAATAGGC 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113256,FBtr0113255,FBtr0083959,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 1 8 8 98 3R 16623384 16623473 GCCTCGAATATTGAGGTCTC 58 16623534 16623552 CATCATTTGCATCATGCGG 58 NA Drosophila melanogaster 61 CG34286 FBgn0085315 FBtr0112482 1 1 1 81 3R 15541509 15541527 TCCTGCTTGTTGTAATCGT 57 15541390 15541467 CTTTCCAGATGAATCTGTTTCG 57 NA Drosophila melanogaster 61 CG18493 FBgn0038701 FBtr0083756 2 1 1 88 3R 15216224 15216373 CCTATCAGATGCGTTATTTGCT 59 15216422 15216440 CTCAATCTCCCATTCGCCA 59 NA Drosophila melanogaster 61 CG14297 FBgn0038655 FBtr0083696 3 1 1 85 3R 14724287 14724366 TTTGTCGTCAGTTCACCGT 59 14724413 14724433 GAGGAGCAGTTCTTTGAACAC 59 NA Drosophila melanogaster 61 CG12320 FBgn0038590 FBtr0083605 1 1 1 60 3R 14077655 14077673 CCGATGGACTCATTGAGGA 58 14077613 14077631 ACAGAGTAGCCCACTAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083185,FBtr0083186 1 2 2 60 3R 11686260 11686278 AGCTCAAGAGAAGGCAGTG 59 11686301 11686320 ATATCGGTCGGTTCTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083135,FBtr0083134 3 2 2 60 3R 11054139 11054157 TCCTATCCATCTTCGCCTC 58 11054097 11054115 TCCGAGTTATCTATGCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889,FBtr0082888 1 2 2 80 3R 9917053 9917074 AGGATTATTTGTGATCTTCGCC 59 9917115 9917540 TTCGATTTGGATTTCGGGC 58 NA Nonspecific Drosophila melanogaster 61 CG9288 FBgn0260464 FBtr0082829 1 1 1 236 3R 9605477 9605495 TTGATCGAGGAACTCCAGG 58 9605748 9605768 GGATCATCTGCTTGTACTGAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114374,FBtr0114375 3 4 4 92 3R 9257513 9257594 ACTGTGAAATTGGATCCAGAC 58 9257441 9257461 GCTCGTTGCATTTCTAAATGG 58 NA Drosophila melanogaster 61 CG34308 FBgn0085337 FBtr0112504 2 1 1 60 3R 8915295 8915313 ACCCTCATCACTATCACCA 57 8915337 8915355 TCCACAAAGGATTTGCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 3 3 3 179 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795021 8795039 TGATCGAACTCGTACTCGC 59 NA Drosophila melanogaster 61 Hsp70Bc FBgn0013279 FBtr0082638 3 1 1 60 3R 8336531 8336550 AACATCACGATCAAGAACGA 57 8336573 8336591 TCACCATGCGATCAATCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD2 FBgn0010038 FBtr0082569 3 1 1 60 3R 8198251 8198269 AATGTCTCCAGGTGGTACG 59 8198293 8198311 CCCAGTTCTCATCCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 3 3 3 94 3R 7778480 7778560 AGTTGAAAGCTCGCATAAGG 58 7778617 7778635 CTCATCAAGCAGCTCTTGC 59 NA Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 1 1 1 101 3R 7718482 7718553 TTGACGAGATCATTCGCCA 59 7718399 7718418 TTTCATAGGCCTCCATTGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17360 FBgn0037949 FBtr0082531 2 1 1 80 3R 7608084 7608165 ACCAGTAGCTTAATGGGTTCC 59 7608024 7608042 AGGCGTAGAGCTTAACGAG 59 NA Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 3 2 2 80 3R 5575743 5575766 GTTAAGGATATGGGCTATGAAGTG 59 5575800 5575879 CATAGTATCACAATAGTTCGGAGC 59 NA Drosophila melanogaster 61 P58IPK FBgn0037718 FBtr0082074 3 1 1 127 3R 5413100 5413118 AGTGACCTGCTCATGATCG 59 5413269 5413290 TCCAGATGGTTCTCAATATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8132 FBgn0037687 FBtr0082029 3 1 1 113 3R 5227297 5227370 AACTAGCAACATCATGCGT 57 5227447 5227465 GGTTTATGCTCCTTGACCG 58 NA Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 1 1 1 64 3R 4620576 4620594 GAATCAAACCTCCCACGAG 58 4620622 4620731 TCGATATGTCGCACTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7963 FBgn0037584 FBtr0301759 3 1 1 60 3R 4188775 4188793 AATATGCGTGGAGTCGGAG 59 4188815 4188835 TGCCGTGTCTATGTTTATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pif2 FBgn0046873 FBtr0081676 2 1 1 83 3R 2374794 2374815 GTAGGTAAATAGTCACACGGAC 58 2374859 2374938 TTCGATTCGTGCTTGAACC 58 NA InUTR Drosophila melanogaster 61 glob3 FBgn0037385 FBtr0078640 1 1 1 81 3R 1656053 1656122 CAGGACGTATTCTATAGCTTCCT 59 1656163 1656181 CTTTCACGTTGAGCTCAGC 59 NA Drosophila melanogaster 61 CG12171 FBgn0037354 FBtr0078708 2 1 1 60 3R 1459691 1459709 GAATCTTGGAGCTAGGCAG 57 1459732 1459751 TTCATAACGCGGTCAAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-996 FBgn0083014 FBtr0113599 3 1 1 60 3L 261878 261897 TTTACTGTTTGCAATCGGCT 58 261837 261858 TAATCAGTCGCAAAGTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRalpha-80B FBgn0037212 FBtr0300118 1 1 1 80 3L 23232106 23255818 GATGGGTTTAAGGTTGATCTGAG 59 23255858 23255876 TTCAGATAGGTCCACACCC 58 NA Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 3 2 2 81 3L 23087936 23088014 AGCTGATAGGCTTCAAACTG 58 23087874 23087893 GGGTTGACCAATACGAACTC 58 NA Drosophila melanogaster 61 CG14450 FBgn0037184 FBtr0078537 1 1 1 96 3L 22720565 22720639 ATAGCCAACTACGACATAACC 57 22720489 22720507 CATACAGGATGTCGCTGAG 57 NA Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 2 1 1 71 3L 22639463 22639481 AGTTTGCACTCTTGTCTCC 57 22639516 22639620 AAATTGGACTTTCCCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 S1P FBgn0037105 FBtr0078466 2 1 1 84 3L 21609586 21609604 CTTCTTCCAGGGAATGCCT 59 21609462 21609541 GTGTAAGAAACTTGGGAGTTCG 59 NA Drosophila melanogaster 61 CG33214 FBgn0053214 FBtr0078388 1 1 1 80 3L 21497137 21497155 ACATCGATCGGTATTGCTC 57 21494012 21497096 TTAGACAGTGAATCACCTTTCC 58 NA Drosophila melanogaster 61 CG7632 FBgn0037071 FBtr0078339 3 1 1 112 3L 21298029 21298047 GTCCAGAGGTCTGTTCCTG 59 21298180 21298200 CTGGTATGCTGATTTCATCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG6289 FBgn0036970 FBtr0078172 2 1 1 96 3L 20336865 20336884 GGCCTCCAAGAATGAATCTG 58 20336942 20337018 TAGTCCAGCCTCATATACGG 58 NA Drosophila melanogaster 61 CG7298 FBgn0036948 FBtr0074859 2 1 1 219 3L 20195799 20196021 ATCAAACTGCATACAACGTG 57 20195599 20195618 AAACTGTCGTCGTAGTAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 Ac76E FBgn0004852 FBtr0074897 1 1 1 80 3L 19966656 19966744 TGTAATCGAATTGAACCTGGC 59 19966785 19966804 TTGCTCAGGTAGAGGAAGAG 58 NA Drosophila melanogaster 61 Rab8 FBgn0015796 FBtr0074921 1 1 1 88 3L 19862400 19862478 CTGCAGATATGGGACACTG 57 19862330 19862348 TATACCAGCATGATGCCCA 58 NA Drosophila melanogaster 61 CG14096 FBgn0036871 FBtr0074986 1 1 1 96 3L 19460058 19460133 CATAATGTTCAAATCCGCCGT 59 19459982 19460000 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075043 3 1 4 64 3L 18985822 18991115 ATCATGTCCGACCAGTGTG 59 18985776 18985794 TCGTTTCCGGTTCCATAGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 3 1 1 71 3L 16464834 16464921 CACACTTCCGTGACTACAC 58 16464781 16464799 AATGGACTATCTGCTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 2 4 4 80 3L 16398478 16398497 GAGCAGGAGAAATCAAACGA 58 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 3 2 3 95 3L 15104075 15104193 AAACGGTTCAAGTTGTCCC 58 15104252 15104270 CCTGTGGCTTTGAAGATCC 58 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075921 1 1 3 80 3L 12743768 12743786 ACTCAAACACGCCAATGTC 59 12743830 12743910 GTGACTGAACTGTCGACGA 59 NA Drosophila melanogaster 61 CAH2 FBgn0027843 FBtr0076001 2 1 1 117 3L 12173245 12174786 CTTGATTTGTGCTTCTTTGGTC 58 12174864 12174882 GTTTATGGGACTCTGGTGC 58 NA Drosophila melanogaster 61 Rh7 FBgn0036260 FBtr0076020 3 1 1 82 3L 12160655 12161251 CGGGTCTGAGCAATTACAG 58 12160591 12160610 ATTCACCTTGGCAATGTAGC 59 NA Drosophila melanogaster 61 CG34420 FBgn0085449 FBtr0112716 1 1 1 92 3L 11847413 11847431 CCACAAATCACTGTGGTCG 59 11845695 11847357 TATGCTGACCACACTTGGA 58 NA Drosophila melanogaster 61 CG11811 FBgn0036099 FBtr0076265 3 1 1 60 3L 10684863 10684884 CCACAAGATCATCAATAACGTG 57 10684905 10684923 GACAAAGTTGCGGAATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34001 FBgn0054001 FBtr0300947 3 1 1 102 3L 10627291 10627380 GCCAACCTATTCTCATCATTGG 59 10627443 10627461 TCTCCCTCATTGGTCTTGG 58 NA Drosophila melanogaster 61 CG18180 FBgn0036024 FBtr0076389 2 1 1 60 3L 9634499 9634517 GAGACATTGGTCTGATCCG 57 9634540 9634559 GGGATCTTGTTGATCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3280 FBgn0036017 FBtr0273440 3 1 1 80 3L 9597053 9597072 TTCTACAAAGGACAGCGAGG 59 9597185 9597525 TTGCAATGGGAAATCGTTCAG 59 NA Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 2 1 1 67 3L 9420423 9420503 CGAGAGTGCATCAATCGAG 58 9420534 9420552 TTGGTTAATCTCCGCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 3 3 3 80 3L 8977958 8977978 GCTTCAACTCAGAAATCTCGA 58 8977753 8977917 TTTGGAAGCTCGATTCTGAG 58 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 2 3 3 84 3L 8181668 8182392 ACGACTGGATGGGTTACTC 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 CG7548 FBgn0035792 FBtr0076830 2 1 1 60 3L 7498765 7498784 CTGTCATCCACTATTCTCCG 57 7498724 7498742 GTACCGAAACCATCGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cralbp FBgn0035636 FBtr0077117 3 1 1 120 3L 5779550 5779569 ACAACGATCAAAGGAATCGA 57 5777549 5777568 GCACCATATTCTGCTTTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32232 FBgn0052232 FBtr0073373 1 1 1 60 3L 4995542 4995560 AGGCGTTTAACAAGTGGTC 58 4995500 4995524 CTCTTGATGTCTCTATAAAGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ero1L FBgn0261274 FBtr0073217 2 1 1 112 3L 4171464 4172229 AGGCCGCGTTTAAATACAC 58 4172305 4172323 CGCCTGATCACTTATGCTC 58 NA Drosophila melanogaster 61 CG14984 FBgn0035480 FBtr0290224 1 1 1 105 3L 3951475 3951759 AATCGAAGAGTCTCGTCACC 59 3951389 3951407 ATATCCGATACCGTGGAGC 58 NA Drosophila melanogaster 61 CG9965 FBgn0035381 FBtr0072976 2 1 1 63 3L 2955796 2955814 CCAAACTGATCAACCAGCA 58 2955841 2955924 CTCTCGAACTTGGCTTTGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 3 2 2 121 3L 2373060 2373139 ATGTAACATTGCCCAGGGA 59 2372957 2372975 CAGAAATCTGCGGAAACCG 59 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072781 3 1 3 84 3L 1798916 1799023 AGGAGAGGTTTAGGACAAAGTG 60 1799068 1799086 TCTCTATCCCACTTCCGCT 60 NA InUTR Drosophila melanogaster 61 CG12011 FBgn0035257 FBtr0072764 2 1 1 80 3L 1694632 1694723 AACCCTCATCATGCATTCTC 58 1694765 1694784 TCCTGTTCTAGAACTCTGCC 59 NA InUTR Drosophila melanogaster 61 Bgb FBgn0013753 FBtr0072758 2 1 1 60 3L 1640357 1640380 CAAGTCCTACTTTATCATGAACGG 59 1640398 1640417 TTCCAGGTCTATCCATCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573,FBtr0072572 1 2 2 85 3L 335982 336000 TCTACACCATACATCCGGC 59 335844 335934 GGAGAACATCATGGCATACG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-176 FBgn0086659 FBtr0091917 1 1 1 65 2R 19727559 19727579 CTATTTGGCCGGATTAATGTG 57 19727514 19727532 CCTTACTCTGCCTTCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 1 1 1 115 2R 6151281 6151299 GATCTCGGTCCCAAGATCG 59 6151121 6151204 TTAGATTTCCATGGGTGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 uzip FBgn0004055 FBtr0072397 3 1 1 86 2R 20915934 20915952 CTTCCGATACGAGCTCAGG 59 20915999 20916077 AGCTTCCTAGTAACCAGTTCAG 59 NA Drosophila melanogaster 61 CG3776 FBgn0035088 FBtr0072395 2 1 1 80 2R 20857656 20857674 TTCGACCCTACTTCGACAG 58 20857717 20857788 TTGAGGATACTACCTGCAGC 59 NA Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295 3 1 2 117 2R 20361917 20361991 CAGTAATCCTCGACATGTATATGG 58 20362067 20362085 CTCATGTGGTACTTGTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tal FBgn0023477 FBtr0072141 1 1 1 72 2R 19827986 19828006 ATGTCGGTATTACAGGAACTC 57 19828039 19828588 TGTTGATGGCTTCAAAGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Dcp-1 FBgn0010501 FBtr0072062 2 1 1 90 2R 19440346 19440364 CATACACGCCGACTTTCTC 58 19440478 19440496 CGATTGCATGTACCAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 yellow-d FBgn0041712 FBtr0072011 3 1 1 152 2R 19266794 19266866 TTCAGAGTGGCTATCACCG 59 19266982 19267000 GATGTATGTGTCGTTCGGG 58 NA Drosophila melanogaster 61 CG4610 FBgn0034735 FBtr0071834 2 1 1 60 2R 18381381 18381402 CAGATAACATCACTATCGAGCA 57 18381423 18381441 TTAAGCCAGCTCAGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18735 FBgn0042098 FBtr0071744 1 1 1 60 2R 17686385 17686404 GAGGTCCATGAGTATCCCTG 59 17686344 17686362 CGCCGCAATAGAAATTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tab2 FBgn0086358 FBtr0086516 3 1 1 199 2R 15190193 15190211 TATCGAGCGTCAGAAGCAG 59 15190374 15190455 CCTGCGGTTCATTTAAGCA 58 NA Drosophila melanogaster 61 CG5726 FBgn0034313 FBtr0086772 2 1 1 80 2R 14067023 14067043 CTGAACTCCAAGATCAAGACC 58 14066026 14066982 CTCCATTGACTCACAAAGCA 58 NA Drosophila melanogaster 61 CG8155 FBgn0034009 FBtr0087391 3 1 1 139 2R 11209382 11209488 AAGTGAAGAAATGCGAACCC 59 11209262 11209284 CTTGTACTTAATGGAGAAGTCCG 59 NA Drosophila melanogaster 61 CG12859 FBgn0033961 FBtr0087440 3 1 1 116 2R 10644159 10644177 GAGTTCCTCAAGCAGAGCT 59 10644335 10644355 GAAGTGTTCGTAGTTGGAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18371 FBgn0033893 FBtr0087599 2 1 1 68 2R 9916438 9916457 TACTGAATATCGGCAGTCCG 59 9916488 9916506 AAGTGATCTCCTTGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6357 FBgn0033875 FBtr0087638 1 1 1 80 2R 9728408 9728428 GAAGCCACTACATCTACATCC 58 9728467 9728546 AAAGTCAATCAGGAACTTCTCC 58 NA Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 1 1 1 60 2R 8433566 8433645 CCTTACAACGTAAGTGAATCATACC 60 8433661 8433681 TATCGGTCAAGACAAAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG30039 FBgn0050039 FBtr0088023 3 1 1 80 2R 7939155 7939175 CACGTTCTAACGATAAGTCGT 58 7939043 7939114 GTTTCTACACTTGGAAGCGG 59 NA InUTR Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082,FBtr0088083 3 2 2 82 2R 7578187 7578206 CGTAATCTTATGCGCAGCAG 59 7578033 7578055 GGATTGAGTACCTCATTGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 2 1 1 91 2R 3954902 3954920 TTTCCCGTGTATGATCCCG 59 3954780 3954848 TGCGGTGAATAATATGAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 1 8 8 83 2R 3287431 3287449 ATCTACGACAAGGAGACGG 58 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 l(2)k14710 FBgn0021847 FBtr0086000 1 1 1 80 2R 2100656 2100733 GGACACGGAAATGATTAGCTG 59 2100596 2100617 CCACTAACGAGATCGTATTCCT 59 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089945,FBtr0089946 1 3 3 98 2L 20790462 20790480 ATACCATCCCAAGAGCTGG 58 20790327 20790401 CTTCGAGATTCTTGTTCCGC 59 NA Drosophila melanogaster 61 CG2608 FBgn0032870 FBtr0081384 2 1 1 141 2L 20645900 20645918 AAACAAGCTGATCAACCGC 59 20646106 20646124 GGCGTTGAGTATTGAGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 1 1 1 80 2L 17531621 17531711 ATATAGGGAATCCTCGGCG 58 17531559 17531577 AACAGTTCTAGGGTACGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18125 FBgn0028917 FBtr0080642 3 1 1 60 2L 14346460 14346480 GCAGATATCATCATTACTGCG 57 14346420 14346438 CTGCCCGAACTTGATATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 1 1 2 66 2L 13782945 13783014 CTAAATGCGCTGGTCAAGG 59 13782897 13782915 TCTTGGTGCGGTAGTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15480 FBgn0032489 FBtr0080482 2 1 1 60 2L 13224860 13224878 TAACCCAAATTCCGGTCAC 57 13224818 13224836 AGCATGTAAGCGTATGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 giac FBgn0032368 FBtr0080268 1 1 1 89 2L 11610907 11610986 AAACTTCGATGGATTGCGA 57 11610836 11610854 CTCTGAGTACGCTTGTTGG 58 NA Drosophila melanogaster 61 RfC38 FBgn0028700 FBtr0080225 2 1 1 80 2L 11129994 11130122 ACTTCCACAAGGATCAAGC 57 11129932 11129950 AGGGTCCGTAGAACATCAG 58 NA Drosophila melanogaster 61 lectin-33A FBgn0040096 FBtr0113317 1 1 1 96 2L 11002194 11002267 GTATCTTTGCAGGAGGCCA 59 11002324 11002345 GGAGTTTGTCCTCTTGATTGTC 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 1 2 3 169 2L 10426971 10426989 ACTCGTTGGCAAATTAGGC 58 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32987 FBgn0052987 FBtr0079735 2 1 1 60 2L 8863951 8863971 ATCCTTATCGGAATTACGGTG 57 8863993 8864011 GCAGGTGAATATGGGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9466 FBgn0032068 FBtr0079742 2 1 1 80 2L 8775079 8775161 ACTGATCAAGTACGTCAACG 58 8775018 8775036 TTCAAGTAGCAAGTGGGTG 57 NA Drosophila melanogaster 61 CG7466 FBgn0031981 FBtr0079541 1 1 1 80 2L 8049210 8049291 ACTACGAGGTTGATGTACCA 58 8049334 8049352 GAATCAACGACTCGTGCTC 59 NA Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301129,FBtr0301128 2 2 2 74 2L 8028037 8028055 CATCAATCTGCCACAGCTC 59 8027907 8027927 TCTATCCAGAAATCAGCACTG 57 NA DesignNoJunction Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 2 2 2 80 2L 7447294 7447518 ATCATGCACAAGGAAATGGC 59 7447233 7447252 CAGACTGAGATCAATTGGCG 59 NA Drosophila melanogaster 61 Atac1 FBgn0031876 FBtr0079362 3 1 1 60 2L 6959453 6959471 GTACATGGATGCCGATCTG 58 6959411 6959431 AAGCTTAAGGCATAGTTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc26B FBgn0040950 FBtr0079203 1 1 1 108 2L 6152055 6152138 ACGCCATAGTAATTGCATGTG 59 6152208 6152226 CGGTAGAGTTGGTTGTCGA 59 NA Drosophila melanogaster 61 Vm26Aa FBgn0003979 FBtr0079239 3 1 1 247 2L 5960238 5960256 AAATCCTTCGTGTGCATCG 58 5960009 5960028 CTGAACAGGTAGTTCTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13999 FBgn0031753 FBtr0079150 2 1 1 111 2L 5956023 5956099 CTCTTTGTCACTCAGGATGC 58 5955931 5955950 AATTCCGCAGGATTATGTGC 59 NA Drosophila melanogaster 61 Bub1 FBgn0031696 FBtr0079069 2 1 1 97 2L 5281903 5281921 AAAGCCACTGATTCTCGGA 59 5281982 5282084 CGTTTCAGCACCTGATCAC 59 NA Drosophila melanogaster 61 CG15432 FBgn0031603 FBtr0077438 3 1 1 186 2L 4442539 4442560 ACTAAAGAACGATTCGGATCTC 58 4442707 4442725 TTCCTGCTGCTTCTTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8852 FBgn0031548 FBtr0089937 3 1 1 106 2L 3527131 3527151 TCCCATCTACGATCATCTGTC 58 3527274 3527297 CCAGATTCGTGTTCTCTATTTACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8852 FBgn0031548 FBtr0089937 1 1 1 104 2L 3527133 3527152 CCATCTACGATCATCTGTCG 57 3527274 3527297 CCAGATTCGTGTTCTCTATTTACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33281 FBgn0053281 FBtr0077584 1 1 1 92 2L 3326283 3326303 ATAATGCCGCAGAAGATAAGG 58 3326357 3326442 AACCGGCATCAACTTTACG 58 NA Drosophila melanogaster 61 CG3277 FBgn0031518 FBtr0114460 3 1 1 81 2L 3313753 3313773 AAATGTCACGCTCTACATGGA 59 3313815 3313980 ATTGTACGAAGTGCCTTGTG 58 NA Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 1 2 2 70 2L 2226001 2226076 ATTCTCATGATGCAGCACG 58 2225949 2225968 AACCCATGACCCTTAATGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12674 FBgn0031388 FBtr0077827 2 1 1 60 2L 2080112 2080214 GGATGAAGCGCACAATCAG 59 2080235 2080256 ATAAGTGGGCAACTCATTTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4749 FBgn0031308 FBtr0077959 1 1 1 60 2L 1149214 1149234 CATCACAACTACCATCAAGGA 58 1149254 1149274 CTTGAAGACATCGCTGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 1 1 2 210 2L 1038315 1038333 GAACTGGTACAGATGCAGG 57 1038506 1038597 TGAAGTCCGAAAGGATTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 3 2 2 85 2L 592323 592341 ACACTACCCAGATGTGGTG 59 584430 592274 GGTTCTTGAACCACACCTC 58 NA Drosophila melanogaster 61 CG11562 FBgn0031247 FBtr0078130 3 1 1 97 2L 292640 292660 CTATAAACAATCGGCAGACCG 59 292775 292793 GCAGCGTGTAGGTATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Rpp30 FBgn0022246 FBtr0078143 1 1 1 80 2L 251575 251593 ACGTTATCTTCAGCAGTGG 57 251451 251534 CGAAGATAAAGGCCAAATTAGC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 89 2L 113289 113308 CGGAACTTCTCACAAGTCAC 58 113357 113442 TTTAGGTCCTTGACAATCTTGC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 1 1 1 100 2L 272613 272631 CTGAAGACGACAAGAAGGC 58 272483 272501 CTGACACTGGAAGGAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 2 3 5 129 2L 836577 836595 CACTGAGAACTTTGCCGAC 59 835468 835486 ATATCGATCCTCACTGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 3 2 5 187 2L 835542 835718 ATTTCTTTACGTGGAGTGCTC 58 835375 835393 CTGAACATTGCCACTGGTG 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 1 4 4 80 2L 872013 872035 CAATCGCCTCAAGATAAACTCAG 59 872075 872220 AGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 1 2 2 80 2L 2144041 2144126 AAGCTATACTACAAGCAGCGT 59 2143981 2144003 GTTTAGCTCTGTGATAAGCTTGG 59 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 3 2 4 80 2L 2490783 2490802 CACTAAACTCGTCTCACAGG 58 2490668 2490740 ACCGGAAGATTATGTCGCT 58 NA Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718,FBtr0077719 2 2 2 62 2L 2770393 2770472 ATGATAAATGCGTTGCCTTCC 59 2770496 2770514 GAATCACGAGGAAGTGGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 3 2 3 146 2L 2995063 2995446 TCCTTCAGACGAACATCGA 58 2995556 2995574 CATCAAGTATCCGTTCGCC 58 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 1 2 3 89 2L 3292518 3292536 TGAATCGCTCATCACTCAG 57 3292289 3292465 TCTATCAAGGCTGTCTCCT 57 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 2 10 10 81 2L 3503185 3503261 ATGAAGATGAGGACGAAGTG 57 3503123 3503144 GGTTGTTGTGTTAAGTTTAGGG 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 2 5 11 179 2L 3626211 3626349 GAAGCAGAGAAGGATGGAC 57 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 1 8 9 83 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878994 3879012 CTGATTAGCATCACCGCTG 58 NA Drosophila melanogaster 61 CG15626 FBgn0031635 FBtr0077412,FBtr0077413 1 2 2 151 2L 4837521 4837609 CGATAAAGAACATCACCCTGG 58 4837390 4837408 GTAACGATCCTTGTCGGTG 58 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 1 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0300471 3 1 5 81 2L 5185895 5185914 GACAACTAGCAACACAACGA 58 5185956 5187618 CGTAATTAGATCCTTCTGGCG 58 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 3 4 4 214 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221194 5221212 CACGATCAGCATAAACACG 57 NA DesignRelaxed Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 2 1 2 116 2L 5765982 5766000 ATCAGTGCTCTATTGTGCG 58 5764195 5764213 CTCAATGTAGGCATCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 2 2 2 89 2L 6024381 6024454 TGGAGGGCTATGTAGTGGT 59 6024310 6024328 TCAGACGGATGAAGTGCTC 59 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0113411 3 1 2 125 2L 6494991 6495009 TGAGGACGAACTGGATTCG 59 6495095 6496068 TAGCTACGGAGTCTATTCTGGA 59 NA Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 2 2 2 97 2L 6674205 6674225 AACTGAAACTAGTGGAACCAC 58 6674356 6674374 GTCGATCCAATACCGATGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386,FBtr0290295 3 2 3 88 2L 6768560 6768578 CAGTGTTTATGACCCAGCG 58 6768432 6768508 CATTCCCATGACACCTGGA 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0290119 2 2 3 88 2L 6975792 6975810 GGTACGCAGAACAATCGTG 59 6975124 6975740 ACGGGATCATTGACCACTG 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462 2 1 5 119 2L 7455749 7455831 TTAACGAGGTGTTGAAGAACC 58 7455650 7455670 TGGTTACAATGGTGTACATGG 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 3 4 5 88 2L 7682044 7682122 GACATATCTTCAAGATGGAACAGG 59 7682166 7682187 GAGGATTTGCTGATTATCCTGG 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 3 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 2 2 2 82 2L 8979079 8980061 TTGTCAAGTCTCAGTGGCA 59 8979015 8979033 GACCACAAAGAACATGGCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079916 1 1 6 80 2L 9798300 9806458 CTGTTCCTCTTATAGGCACCT 59 9798240 9798258 TGAGCACCACTACTGTCAG 59 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 2 3 3 80 2L 9911765 9912136 TTTGACACAATGGCCATCC 58 9911703 9911722 GTTCTCCCTTAGGTATCGCA 59 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 1 4 4 126 2L 10248910 10249108 CAAGGAATAGTATGCGCCG 58 10248802 10248823 GCTTCATTAGCTTGAATTCCCT 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 2 3 3 80 2L 10275617 10275705 CTCAATCGGCGTCTTATATCAG 58 10275558 10275576 TTATCCAGTTGCACAGCAC 58 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 1 5 5 80 2L 10297752 10297773 AATCGAGGTAGAAGACGAATCC 59 10297595 10297713 CAAGTAAATAAGCGTACGCCA 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 1 5 6 80 2L 10399673 10399772 ACAGGTATTGTAAATGTCGCG 59 10399813 10399832 ACTTGAACCATTTGTACCCG 58 NA Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 3 2 2 80 2L 10446355 10446531 CTTATGTCAAGGATGACGCTG 59 10446573 10446591 CGGATTCGTTTAGTGTGGC 59 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 1 3 3 80 2L 10464362 10464381 ATCCATGTTCAAGAGCACCA 59 10464239 10464320 TCGCTATGATGAACAACGGA 59 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0080101 2 1 2 86 2L 10646477 10646495 CTCGGTACTTTGGTACCCA 58 10646545 10646627 TCCAATTTCCTGTAGCTGC 57 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 1 8 10 80 2L 10806027 10806050 CTACAGAAGGATCAAATCCTAGAC 58 10805729 10805989 GTCCTGCACATATGTCTTCG 58 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0290007 2 1 2 96 2L 10918980 10923157 GAATGTCATAGTAACGCCGC 59 10918903 10918921 GTGACAAGTGAGCGTTACG 59 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 2 4 4 75 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965844 10965862 CTAAATCGCTAACGCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300114 2 1 4 92 2L 11163927 11165571 CACACCTGATTCCATGGGA 59 11163853 11163873 TCCTGTTTCTTGAAGAATGGC 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300115 3 1 4 104 2L 11162334 11162352 GAAAGGGATCTCGAGTGGG 59 11160323 11162268 GTAAGAGGTTCCTCCTTGGTC 59 NA Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 1 2 2 93 2L 13014015 13014033 TCGAGGATAAAGCGACTGG 59 13013875 13013963 GGTTGGTAACATAGATTTCGTGAG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 3 3 9 80 2L 13274311 13274331 AGCGTATCATACCGATAACTC 57 13274372 13274705 GGTAATTCTGGTAACCACCA 57 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 2 5 5 70 2L 14616430 14616515 ATCTGAAGAACCTGGTGATCC 59 14616547 14616565 ATTGATTGCCTTCAGCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 1 3 9 110 2L 15261795 15261813 ATCTACGACGAATCCTCGA 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 1 2 3 111 2L 15714207 15714225 CATTGGAGCTGCTTTGTGG 59 15708026 15714132 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 1 3 3 82 2L 15958577 15958709 GACTCGAGCATATGTCTGG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 1 3 16 80 2L 16779139 16779159 AAGAAATGCACGAAGGTTCTG 59 16779198 16780558 GAAGAACACCTTTGTGTTACCC 59 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 3 4 4 85 2L 16820585 16820603 TTCTGGACTGGTGAACTGG 59 16820646 16820728 GAATGCCATACTTTAGGAGATTCTC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 1 4 12 85 2L 17717899 17717918 CTTCAATCCCAACGATCTGG 58 17716680 17717851 GATAACAACCGTCAAGCGG 59 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 1 3 3 80 2L 18127999 18128020 GCAATCAGGTGTTCATTATCTC 57 18128061 18128143 TATCCTTGTGCATCTGGTG 57 NA Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 3 1 1 189 2L 18615745 18615763 CAGTGTTCAAATGGAGCCC 59 18615449 18615470 GTCATCGTGATCAATGATGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42305 FBgn0259201 FBtr0299687,FBtr0299686 1 2 2 60 2L 18813142 18813319 AGTCTATCTAAACACCTGTCTTCC 59 18813337 18813356 AATTGCCGCAGTTACTAGTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 2 2 2 80 2L 19419106 19419124 AAACTTCTCCTGCTGTTCC 57 19419165 19419317 CTCTAGGTTATATCGGTTACCC 57 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0299519 2 1 6 119 2L 19515017 19515035 AGATCACCTACAACTGCGG 59 19514845 19514934 CATTTGCGCTATCCGAGAC 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268,FBtr0081267 3 2 7 87 2L 19577188 19577208 CAAACGAAGAGCTAAATCCCA 58 19569162 19569184 GGGTTTCTCTACATAGGTATGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 2 9 9 90 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877068 20877156 AGAAATATACTGGGTACTCAGTCC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0299912 3 1 7 123 2L 21124607 21125357 AGAAATAGCCGAGGAGTGC 59 21126163 21126181 GTTATTGGCACGATCCGAG 58 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 1 3 3 83 2L 21172326 21172344 TATCCACGAGACCAACCTG 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 3 3 3 93 2L 21172391 21172470 ACGATAAGATCCAGCCCAC 59 21172527 21172545 TCGCCATTCTTGATTTCGG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081510 2 1 4 82 2L 21295437 21295458 CAGGAATGATGTACAGAAGGAG 58 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508,FBtr0081511,FBtr0081509,FBtr0081510 3 4 4 99 2L 21297475 21297493 AGAACCTTCGACAGAAGCC 59 21297607 21297628 ACCATATACGTGAAGATTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 1 3 3 113 2L 21627750 21627852 TGACTCAACAGATGCTCCC 59 21627655 21627673 GCCTCATCAAGCTTAGCCT 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 2 5 5 83 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666302 21666320 CGAAGCATTTCGTTGGAGG 59 NA Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 3 2 2 60 2L 22690658 22690678 TATTAACCCTGAAATGAGCCG 58 22690618 22690637 TAACTCAGAATAGCGTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lt FBgn0002566 FBtr0111125 2 1 3 173 2L 22817648 22817723 CATCAGTTGTGACTCTTGGG 58 22817911 22817929 ATACAAACACGTCCTCGGA 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 3 3 3 162 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968906 1969244 TCCAAAGGCAATTCTCTGC 58 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 3 4 5 83 2R 2503182 2503200 GGGAGCTGGAAGCTATCTC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086136 2 1 7 152 2R 2618988 2619072 CCCGATTATGTATGATGGTAATCTC 59 2616494 2616512 GGTTTGTAATCGTTGGGCA 58 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 1 3 5 122 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 2 3 6 86 2R 2814318 2814906 CACATCATCCAAACTATGCCA 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111097 2 1 59 80 2R 3219878 3233784 AGCTGTCAATGTACCTCCC 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111080 1 1 59 80 2R 3243725 3249230 CATCACAGAACCCATTGGT 57 3243663 3243682 TTCGAGCTCTTTATACGGTC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 3 3 59 91 2R 3244593 3249232 GTCATCACAGAACCTGTGG 58 3244520 3244539 CTTAAGGCTTGACCCATAGG 57 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 2 2 2 104 2R 3336438 3336510 CTAAGAAACGCTACGAACAGC 59 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA InUTR Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 3 2 2 85 2R 3721686 3721705 TTAGTGTGGAGTACCATGTG 57 3721751 3721828 AAGACTTCCATCTGATCTGTG 57 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112578,FBtr0112580 3 4 4 82 2R 3724655 3724758 CATTCAGGACTTTGGAGATCG 58 3724593 3724611 GAAGTCCAGTCCTCACCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 2 1 1 91 2R 3812103 3812121 TTTGCCAAGTAGTCACTGG 57 3811965 3811983 CTTCTCCATGAATTGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 2 9 9 80 2R 4568218 4568302 TCATGGACTACCGTGATATGAC 59 4568342 4568361 CTTCCCAGTTGACTAGACGG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 3 4 9 149 2R 4562375 4563993 CAAATGGACAGCTTCTGGG 58 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 2 2 3 147 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967850 4967871 GCAGTACATAAATCGAGATCCT 57 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112673 1 1 4 82 2R 5457770 5457788 GTTCAACGGCAATGATCGT 59 5457643 5457727 GATCATCTGTATCGCATGAGTG 59 NA Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 3 2 2 131 2R 5473113 5473131 GAAGAGAATACGCGACGAG 58 5473285 5473303 CCAATAACGTCGTAGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 3 2 2 85 2R 5608260 5608532 GACTCAGAGTTCTCTTCGG 57 5608193 5608213 CCACATATCTGTTCCATACGA 57 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 1 2 2 106 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860097 GACTATCTCTGACGATCTGCT 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301131 3 1 17 89 2R 6183480 6183498 TACAAGAGTCTCCAGGCAG 58 6183550 6192145 GAAGTGGATGTTCACGTCAC 59 NA Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 1 1 1 68 2R 6199180 6199198 AGATTCCATACGAGACGGA 57 6199079 6199097 TGTTGAAACTGCACTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 3 2 4 86 2R 6358248 6358958 CTTGTATCGGACGGATATGAC 58 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 3 5 12 89 2R 6449615 6449635 GACATTATCTTCACCGACCTG 58 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 3 2 4 82 2R 6731013 6735972 TCCATTGTACTCAAGGCGG 59 6730949 6730967 AGACCCAAATCCTCGTCAG 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 2 2 5 170 2R 7198801 7198821 GATAAATCCGATGCGTAGCAC 59 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088091 1 1 3 94 2R 7469246 7470530 TTATGAAAGCGAATTGCCAG 57 7469171 7469189 GCAATAGGTGTGATAGCCC 58 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0087917,FBtr0087916 2 2 3 88 2R 8276584 8276771 GATCACTCTTACCTGACTGAG 57 8276821 8276839 TAGAATCCCTTGGCATGTG 57 NA Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 3 2 2 84 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512589 8512786 TGTTCTCCGTATCTGTAGCA 58 NA Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 3 2 2 119 2R 8531467 8531488 GCAGATAACAAGGGATTTACCC 59 8530877 8531387 CGTCAAGTTGGCTTTCGAG 59 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087858 1 1 3 161 2R 8648349 8648367 AAATCGTGCTAAGCGACAG 58 8647923 8647942 CTATCACTGCCATCATCCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 1 4 4 80 2R 9074535 9074555 ATATTTGCGCCACAAGATGAC 59 9074417 9074494 TCCTGCGTGATCTTACTGAC 59 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 3 4 4 80 2R 9074416 9074493 TCAGTAAGATCACGCAGGAG 59 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 1 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114538 9114557 CCGTTGAACTCATTGTCCTC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 3 3 12 93 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305322 9306499 AAACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 3 5 5 82 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436390 9436472 ATACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 3 9 15 137 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 1 2 3 102 2R 9928273 9943274 CATGGTATTCAGGTGTCGG 58 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 2 1 1 90 2R 10098816 10098837 CTCATATGATCACGAACATCCA 58 10091512 10091530 GTGACTGTACTCCGGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 1 4 4 233 2R 10758525 10758543 CGCAGTTGTTACGTGAGAG 59 10757703 10757721 CATCGTCGCGGTAATTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 2 4 4 235 2R 10758527 10758545 ATCGCAGTTGTTACGTGAG 58 10757703 10757721 CATCGTCGCGGTAATTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 3 4 4 111 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026098 11026116 GCTGGATTACATTGGCCTG 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 1 4 6 80 2R 11172467 11178447 CCAATTGGGTGTTTCACCA 58 11172405 11172425 GGCATGGTATGAATTTGATGC 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 3 4 6 80 2R 11172467 11178447 CCAATTGGGTGTTTCACCA 58 11172405 11172425 GGCATGGTATGAATTTGATGC 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0301313 3 1 7 112 2R 11651331 11651445 CAAGGAGATCACCTCAGGA 58 11651237 11651255 CGAATCCAATGTCCTGCAG 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 2 4 7 162 2R 11669313 11669332 CTATTGCGGAAACACTCTCG 59 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0302149 1 1 5 116 2R 11825268 11825286 GTTCGTACCTGCGAAATGG 59 11824818 11825190 AAATACGCCAATCTCTTGGAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 2 2 13 125 2R 11850639 11850657 ATACACTCTACGGGTCAGG 57 11848684 11850552 GAATATGTGTCTTTGATGCCC 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 3 2 2 80 2R 12008555 12008575 CCCGAATACTTTATGGACTCC 58 12008616 12008701 CGTCGATAGGAATCCAAAGG 58 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089589 1 1 5 140 2R 12020009 12020027 TTCCTTCATGCTCTCCACG 59 12020131 12023540 CACCACATATCGTCCTGGA 58 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154 2 1 5 82 2R 12248360 12248378 ATCAAGAGTCCTGTGGTCC 58 12248424 12250716 GTGGGAACTGTGAAGTTCG 58 NA Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 3 2 2 60 2R 12837673 12837691 GTGCAACAATTCCCACAGG 59 12837570 12837592 TTATGGTCTCTACAGGAGAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 2 2 3 129 2R 12922400 12922421 CAGGAGAAACTAAATCTGGAGC 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 2 7 9 80 2R 12959277 12959296 GAGATGACAACACCCAAACC 59 12958995 12959238 GACTTGAGCTTGAGTGTTATCAC 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 3 7 9 81 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958997 12959240 CTTGAGCTTGAGTGTTATCACTG 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086924 1 1 3 195 2R 13359115 13359364 CATCACAGCTATAGTCGGG 57 13359523 13359541 CATAATCCGGCTCGTAGTC 57 NA Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 2 2 2 112 2R 13394242 13394960 AACAAATAGACGTCCCATCAC 58 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 1 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614 1 1 5 217 2R 13745129 13745147 CAATCCTACCGCTTTCAGC 59 13746786 13746806 GGTACATTCGTATCGTGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 3 2 4 147 2R 13755586 13755802 CGAAGTGGGAGATAAGTGC 58 13755457 13755477 TTCGTCTACTTCTTTGTCCTC 57 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 2 4 4 80 2R 14363666 14363686 AGGCTATGTTGGTTAAGTGGT 59 14363164 14363627 CGTTCATAAGGCGATAATCCTG 59 NA Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711 3 1 2 90 2R 14512331 14512349 CGAAACGCTCCATTACTGG 59 14511624 14512278 AAAGAGGGACTGTTGTAGGC 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 1 2 3 196 2R 14892379 14893302 TAGCATCAAGGTACAGCGG 59 14893462 14893480 GTTCTTCAAGTACCGTGCC 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0100174 1 1 6 125 2R 15047424 15047442 GTGAACTCACAGATTCCGC 58 15047531 15047693 TTGCTGATACTGAGAGGGC 59 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 1 2 2 80 2R 15266696 15266778 CCTTAATTCATGCCCATCGTC 59 15266814 15266838 GCGGATAAATATACAATCCAGACTC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 3 2 19 104 2R 15359155 15359173 ACAAGTGGATGAACATGGG 57 15359240 15360332 CTAGAGCTTCCGTCTTACCT 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 3 2 6 122 2R 15461674 15461693 GACATTTATGCCGGATGCTG 59 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 1 3 3 93 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148397 ATGTTCTTGGTCTTCGAATCG 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 2 2 5 85 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212362 ATGAATGGAGCTAGCCATCTC 59 NA Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 2 2 2 128 2R 16506814 16506832 CAAGGGCACTTATCACCTG 58 16506924 16506994 ATGATGAACAATGAGCGGG 58 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 3 3 3 134 2R 16891758 16891843 GCGAAGAAGATATGGGTAGCT 59 16891939 16891957 GTTGTTGCTGGGATGATGC 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629 1 1 2 100 2R 17055174 17055192 GTCCGAACGGTCTAAACAG 58 17054539 17055110 CTTCTTCTCCGACAAGTCG 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 1 2 8 111 2R 17187801 17187819 CTCCAACCAGAGTCCTTCC 59 17187891 17191401 GCGATTTATGTTATAGCCAGGA 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 3 2 8 126 2R 17186894 17191401 GGGAGTGAGAACATAAATCGC 59 17191489 17191507 TGGTAAGATGTCGGCTGTC 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 3 2 4 85 2R 17222089 17224945 AGTAATCAGGTCTGGATATCGC 59 17225052 17225070 TCGTTATCGTTGTCTTGCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 3 2 2 193 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471459 17471479 CCATAAGTTTGAGGGAGAGGT 59 NA Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 1 2 2 92 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556901 17556919 GATTTGCTTGCTGTTGCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 3 4 5 149 2R 17956166 17956251 GGAGATAATTGAATTCCCAGCA 58 17956361 17956379 CTGTCCACAGTCTTCTGCT 59 NA Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 1 2 2 215 2R 18935221 18935363 GCCACAAGATACATTGACTTCC 59 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 3 2 2 215 2R 18935221 18935363 GCCACAAGATACATTGACTTCC 59 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 1 2 2 80 2R 19571124 19571143 CTCAACAACTGCGATTTCGA 59 19571186 19571267 AACGGAGTAACCGAACTCG 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072215 1 1 8 101 2R 19816907 19816928 TGCAGAAGAATGGATAACTGTG 58 19814695 19816845 ACATCAGGAACATCTGCGA 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 2 2 2 80 2R 19946586 19946604 ACTTGAAGGTTCCAGAGGG 59 19946648 19946728 GAACGGTGCACAGTAAGTC 58 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 1 4 4 80 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 3 2 2 148 2R 20856570 20856654 TAACACAAACTCGCGTCAG 58 20856440 20856458 CCTTACGCTTTCCGAATCC 58 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 1 3 3 85 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302573,FBtr0302575 3 2 8 99 2R 20887608 20887627 AACACCAAGAAGGTCATCCA 59 20885450 20885811 GATGACTACTAATGAGCACGG 58 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179 3 1 3 137 2R 20960904 20960924 GATACCCGAACGATCTCAGAG 59 20960724 20960806 GCACTAAGAAGTTGCTGCTG 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 2 4 4 96 3L 177449 177469 CGAGAACAATGGCATTATCCA 58 177320 177392 GAACGGTTGTGCTAAGATGG 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 1 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 3 3 3 81 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307565 307583 TTTCGCAGCTCAAATTGCT 59 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 1 2 2 72 3L 898361 898379 GTAATTCCTGGCTGGAGGG 59 898477 898495 GATATAGCCGAAGCAGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 2 2 2 91 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196955 GTCATCGTTGGGAATTAAGGAG 59 NA Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 1 2 2 81 3L 1314022 1314040 AAAGAGCTCTATTGCTGGG 57 1314085 1314170 TAGGTGTGAGGATCTGCTC 58 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301789 2 1 2 133 3L 1434779 1434797 TGATACTCGTCATGCAGCT 58 1433358 1434682 GTTGTTGCTCTACGCACTC 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 3 2 3 86 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573760 1574007 AGCCGAGGTTACTTCTGAG 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 2 1 3 114 3L 1803464 1803483 GTTCCGGAACAAGAAGATCG 59 1803560 1803805 ATCGTCCAGAGCTTGACTG 59 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 2 2 2 101 3L 1825127 1825145 CTGTCTGCTGCATATTGCG 59 1824694 1825063 GAGTAGTGGAGCCTTTCCTC 59 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 1 2 2 80 3L 1873975 1874052 TGTCAAGGAAGTTACATACCG 57 1873915 1873934 GCATTGTTTAGATTTGCGGA 57 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 1 4 4 80 3L 2498021 2498106 CTGGAAGATGTGAAGATAAACACC 59 2498143 2498163 TGAGATCCAGCGATTTACTCC 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072965 2 1 4 98 3L 2502462 2502480 CTGTTCGAATCCCAAAGGC 59 2500454 2502403 TAGGGATACAGCAGACTTTCTG 59 NA Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 1 2 2 80 3L 2600894 2600914 GAATTCGCTAAACACATCACC 58 2600954 2601035 GTCTACGATCTTGACCTTCTG 58 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 1 5 5 64 3L 3300760 3300778 GTACCACCGATCTGGACAG 59 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 1 6 13 117 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593415 3593433 TCATCTCCTCGCGAATGTC 59 NA Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 2 2 2 80 3L 4287619 4287699 TTAAGAATTGGCTTGCTAGCG 59 4287741 4287759 TGAAACTGAACTTGGTGCC 58 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599 1 1 5 120 3L 5160148 5161351 ATGTAAAGGTTACGGCTTCG 58 5160047 5160065 ATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 2 4 10 83 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534358 5534445 TCGTTAATACCGTTATAGCGTC 58 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 2 4 4 64 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775806 5775824 ACCATATGCCATGACCCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 3 4 4 93 3L 5921732 5921814 ACGTACAAGATCCAAACCAC 58 5921870 5921888 ATATGTTGATGGTGGCCTC 57 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 1 3 3 80 3L 6187186 6187206 AGATCATAGCGATCCTCAAGG 59 6187245 6187333 TGAATTCCTCCAGTTTCATCTG 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301958 2 1 11 175 3L 7042666 7043281 AATACGAAACGTGGTATCCG 58 7044342 7044360 GGTGTCCAGATTCTGTACC 57 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301106,FBtr0301958 1 3 11 158 3L 7012851 7012870 GGCAATGGTTATATCGACGC 59 7012991 7028082 ATGTCTGTCGCCTGAATCC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 2 6 11 81 3L 7005317 7005336 GCATTGGCAATGATTTGCAC 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 1 2 2 69 3L 7125770 7126229 TTTCCGAGCAATTCAACGC 59 7126262 7126280 AACTCGTCATCACTGGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 3 4 4 86 3L 7504534 7504620 GACAATGAGCTCACCATCC 58 7504669 7504688 CTGGTAGATGATACGCTGGT 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 2 12 15 95 3L 7699008 7699084 TTGAACCAGAGGAGATTGC 57 7698931 7698949 ATACGACGGCAAAGTACTG 57 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 2 3 15 122 3L 7689772 7689791 CAACTACAGAGTCGACCCTC 59 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 2 3 15 122 3L 7689772 7689791 CAACTACAGAGTCGACCCTC 59 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 1 3 13 80 3L 8628115 8628133 AATTCAACTCGCCCATTGG 58 8628175 8631270 GCTGATACTGGTTTGGAACTG 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0301137,FBtr0301913 3 2 5 117 3L 8927399 8927513 GTTTACCAGAAGGCTTGTAACC 59 8927213 8927231 CATCTTCCTGACGTTTGGC 59 NA Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 1 2 2 80 3L 8966607 8966627 CGTATTTGGATGTTAAGCAGC 58 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076525,FBtr0076528 1 4 5 89 3L 9083435 9083453 CATACCACCAGCCTTTGTG 58 9083506 9083581 TATTGAACGGGAGCCTGAC 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 2 2 4 81 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330139 9330159 CAGACCATGAGAGTTCTTCGA 59 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 3 2 4 164 3L 9707711 9708852 TTGTGCGAAGAAGTGACCA 59 9708980 9708998 CGATGTGGTAATTGGTGGC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0100386,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 8 8 115 3L 9825860 9825878 ATTTGAAATGGCCACCACC 59 9825956 9826036 TGTGTAGTCCCGGTTAACTC 59 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362 1 1 4 200 3L 9856706 9857301 TGTTCAATGTTCTACAGCGC 59 9856525 9856543 TATTGGAATCCGAGGTGGG 58 NA Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 3 2 2 118 3L 10652465 10652485 GACGAGATACAGATCTATCGG 57 10640129 10640147 TTCAGCTTGTTCACCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 3 4 4 115 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865345 10865363 GGCTTGATATCCGGATTGG 58 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 3 3 3 80 3L 10889923 10889942 CGACAAGGATGGATTTAGGC 58 10889708 10889882 GAGGTTACCAAGAGTACCTCC 59 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 2 4 5 126 3L 11109614 11109778 CACCAACTGGTACAATAAGCG 59 11109442 11109461 GGAGTCTGGAACAGATCCTG 59 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 3 3 3 89 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152460 11152478 TGTGGTAGACCATCCAGTG 58 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 2 3 3 87 3L 11171620 11171755 GCAGAGATATTCTCACGTGG 58 11171552 11171570 AGGTTCGTGTTCTTGTAGC 57 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0076189 1 1 3 80 3L 11176775 11176797 TTATATGGCGCTCTATCAGTACC 59 11175727 11176739 GATGATTTCTCCTGATGCTTGAC 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 3 3 5 128 3L 11219782 11219802 TACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 1 3 3 91 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 2 2 2 80 3L 12064091 12064174 TTGTGGCAAGGTGATATACTC 57 12064031 12064049 TTGTCCCTTAGCAACTGAC 57 NA Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 3 1 1 128 3L 12185118 12185137 TCTTCACCGAAAGTATGGCA 59 12185284 12185302 AAGTCATCTCCGTGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018 1 1 2 86 3L 12194929 12194949 ACCAAAGGGTTATGAAGAAGG 58 12194581 12194881 TGATGGGTATATCAGCGGC 59 NA DesignRelaxed Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 1 6 6 85 3L 12206875 12206893 TCGATATGGTCGGTGATCG 59 12206565 12206826 GATCCCTTGAGATCCTCGT 58 NA Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 3 1 1 107 3L 12497726 12497744 GAAAGACAATCACGCCGTG 59 12497881 12497899 TTGAAGATGTTCTCGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 1 2 3 90 3L 12743758 12743777 CCCAGATCGAACTCAAACAC 59 12743830 12744415 GGGATGAATCTGTCGACGA 59 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354 2 1 2 171 3L 12747711 12747788 CTAAGCTTGCAGAATGTTCTG 57 12747235 12747253 TCAAGATCACCAAAGCTGC 58 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 3 2 2 80 3L 13437179 13437325 TTGTAGAGACGAACAACATGG 58 13437367 13437385 CCAAGCTGGTCGAATTGAC 59 NA InUTR Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 3 7 7 80 3L 14407795 14407884 GAGGCTAAGGAAATTACGATCC 58 14407736 14407756 TCGATCACCCTTCTTTAGACG 59 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 2 3 3 80 3L 14739678 14739696 GCCAATGATGAAGCCAAGG 59 14739736 14739818 GTAAATGGAGTCATAGTAAGCCC 58 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299650 2 1 3 81 3L 14729224 14737298 CAGAGCGATCAGAATCTAATGC 59 14737338 14737358 CTATGACCGTGGTTACAACAG 58 NA Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 1 2 2 83 3L 14989528 14989605 AGAAGATATGGTACGCTTGGA 58 14989650 14989668 GAACCAGAAGAATGCCCAG 58 NA Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075633,FBtr0075632 1 2 2 60 3L 15090484 15090502 ACACTCTAAAGGAACCGCA 59 15090523 15090544 CGCACCTGTTTCATAGTATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gdl FBgn0001099 FBtr0091757 2 1 1 60 3L 15502960 15502979 CTTACCATTCGGAACTTCCC 58 15503057 15503075 TCGGTGAGTAGATCGTAGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 2 2 2 86 3L 15673900 15673979 AAATCAAGGAACCTGAAACGC 59 15674027 15674045 ATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 2 2 2 80 3L 16084888 16084906 CAATCACCACAATCAGCGG 59 16084949 16085641 GATAGTGCTCCGTCCATAGG 59 NA Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0075350,FBtr0100145 2 2 2 99 3L 16674040 16674348 AATTTACACAGGTGGCCGA 59 16673959 16673977 GCCTTCTTCTCCAGATCCC 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0091474 1 1 3 80 3L 17031079 17031097 GCGAGCGATTAACAAATGC 58 17030960 17031036 TCTCCCAACCCTCATTATCC 58 NA Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277 2 1 2 109 3L 17847796 17849753 TACTATGGAATGCCCAGCTG 59 17847706 17847724 AAGGCGGATAAGACCTTGG 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075006,FBtr0075013 1 2 12 118 3L 19302780 19302854 AGTGGCCTACTACTTGGGA 59 19302680 19302698 ACTCGATCTCGTTGGTGAG 59 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 1 4 4 80 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 3 2 2 81 3L 19650463 19656390 TTTCCATCGAGAGTAATCCCT 58 19650402 19650423 CGACTAGTGACATATTGTGCAG 59 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0100394 2 1 3 119 3L 19903154 19903172 CGGAGGAAGAGAATGACGA 58 19881566 19881643 CTTCGTCGTTCTGATTCGG 58 NA Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 1 2 2 81 3L 19989870 19989957 AGAGTTCACAGACGCTGAG 59 19989998 19990020 CTCTTCTACTGATAAATGCCCAC 59 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 3 2 5 124 3L 20146359 20146377 CAAGATGGGCATTATCGGC 59 20145395 20146274 GAGTATTGTTAGTGTGGCTGTG 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078203 1 2 5 151 3L 20503869 20505045 CAAGGCAGCAGTTAATTGCA 59 20505157 20505177 TGAGGAGACGGACTTTATTGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 3 2 18 187 3L 20812391 20812409 ATGATCACGAACATCGGCT 59 20812560 20825954 GACTTGTTCTTCGCGTTCC 59 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 2 5 5 111 3L 21192061 21192083 GGATGGTAGACATATCTACAACC 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 1 2 2 134 3L 21297182 21297400 ACAAAGACAACGTCGTTACTG 59 21297068 21297086 TCACTGCCGGTAATAGTGC 59 NA InUTR Drosophila melanogaster 61 mub FBgn0014362 FBtr0301364 3 1 5 87 3L 21908036 21908055 GTATTGTGACTGTGTCTGGT 57 21908102 21908227 CCTACATCATTGAACTCTTCGA 58 NA Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 3 1 1 91 3L 23119447 23119468 CATGCAAATTACCTGAGTTGTG 58 23119836 23119854 CACATTACCGTCACTCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 3 2 3 113 3L 23734176 23739299 ATTGGACAGGGATCCTACG 58 23739376 23739394 CATAAGACCAGCTTGACGC 59 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 2 2 2 80 3L 24247007 24251598 GGGTTATATTGGCAGGATAACG 59 24251636 24251657 CCTATCATAGTGTTTACCTGGC 58 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 3 2 2 162 3R 67637 67713 ACATCCATATACGAGGCGC 59 67493 67513 GCTTAAGTAGGGCTATGTCGT 59 NA InUTR Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 3 4 4 90 3R 293416 293435 TTTCTACTACATGATCGCCG 57 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078866 3 1 4 176 3R 535908 535926 CAACGGGAACTATAGCCAG 57 536066 536347 CAGCCCAGATCTAATTCGT 57 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 1 2 3 80 3R 1008596 1009506 TGTGCTAGATATCGAGCGTC 59 1008535 1008555 CAGGAACATGGTTAGCTTGTG 59 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 2 2 3 80 3R 1008598 1009507 GTGTGCTAGATATCGAGCG 58 1008536 1008555 AGGAACATGGTTAGCTTGTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078686 1 1 2 94 3R 1356980 1357000 TCTAAGACTTACGAAGACGCT 58 1357054 1357390 CACCTTCGGAATCAATATCCG 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 3 2 2 81 3R 1434218 1434239 CGAGCATCTGAACGATAATTCC 59 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 2 2 12 93 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587157 1587375 TACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 1 2 2 93 3R 2037880 2037899 CATTCGAGTACTCCGAGGAG 59 2037955 2038122 GACTTGATGAAGCGTTCGG 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 3 2 2 89 3R 2191998 2192077 TCGAATGATTTCCAAGTCGA 57 2191928 2191946 TCTAGTGGTACTAAGGCCC 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 3 6 11 80 3R 2724255 2734247 GGTAAGTGTCAAGAACGCA 58 2724193 2724214 GAAGTGAAACTCCTTCTCTAGC 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 3 6 11 80 3R 2724255 2734247 GGTAAGTGTCAAGAACGCA 58 2724193 2724214 GAAGTGAAACTCCTTCTCTAGC 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300493 1 1 9 108 3R 2927810 2937691 CCACCAATTCAACGTACCG 59 2927720 2927738 CAGTTACCGCAATGGATGC 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184,FBtr0302183 2 2 3 82 3R 3017842 3018222 GCAGTCATCAAGTAATCAGCG 59 3018266 3018284 CAGCTGCAGTACCAAATGC 59 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 1 2 4 179 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118150 3120142 CAGAAAGTGACCTTTCTGCA 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 1 3 4 88 3R 3586988 3587741 CACAAGGAAGTTGTAGGAATCC 59 3587790 3587808 CTGCTGAATCACGGAAAGC 59 NA Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 1 2 2 80 3R 3804722 3804740 TGCTACTCTCCGGATTCCT 59 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 3 4 4 92 3R 3848737 3848755 TAATTGCCCGGATCTCCTG 59 3848602 3848681 ACAGATGCCAAGTTGACCA 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 3 2 4 80 3R 3848353 3848373 GCAAGAAACTAATCATCGCAC 58 3847658 3848183 CTATTGGGTTGCAGATGCT 57 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 1 4 4 92 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081994 2 1 5 80 3R 4982892 4982910 TGCAGAAACGCTACATTGG 58 4924450 4982850 CGTCACTTACAATATGCTCCT 58 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026 3 1 2 82 3R 5191410 5191484 ACTCCTTGTCCGAAATCCA 58 5191525 5191548 CTGCCTGTATATTGTAGGAAATCC 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 1 4 4 93 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 2 4 4 94 3R 5401288 5401373 ATACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 3 4 4 81 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592835 5592908 GATCATGTTGTGCAGATGCT 59 NA Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 2 2 2 83 3R 5597065 5597085 ACGCATTGCTATTATTGGAGG 58 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 1 3 5 81 3R 5701880 5701898 GATGTCGTCAAACACGACG 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 3 5 9 80 3R 5835091 5835469 AACAAAGAGTCGTGCATCG 58 5835029 5835047 CGTAGATCGTACCCAGGTG 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 3 2 8 96 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359647 6359667 AAGACTGAGGAATACAATCGC 58 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 2 1 1 72 3R 6586343 6586361 ATCCTGAATCCTGACAGCC 59 6586228 6586246 GATGCATGTTGACGAACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300079,FBtr0300078 1 2 3 80 3R 6640541 6640562 CGTCATGAAGAATTTATCTGCC 58 6640423 6640503 CGAATCAAAGATTTATCCGCTG 58 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100461 2 1 4 219 3R 7388966 7388984 CTACGTGTATCCGCATGAC 58 7386745 7386763 TAGGTGATGCAGATCTCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 1 1 1 87 3R 7718579 7718597 GACAGGTATTTGTCCCGTG 58 7718457 7718476 ACGCTCTGAACAGTTAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 2 5 5 80 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796281 9796299 TCACCCATTTCTTCCCGAC 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 2 7 7 88 3R 10634008 10634095 CCTACGTTAAGGTGTATCTACTG 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0301845 3 1 2 180 3R 11051627 11051699 AGCGATAATGCGGAATCCT 59 11051843 11051861 AGTAGTCCTTGCCATCCTG 58 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331 2 1 9 88 3R 12122988 12123007 TGCGAAGACTGTTTCAAGAC 58 12123056 12123187 CTATGTCTCCATTGTCTTCCC 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083384 2 1 5 135 3R 12758196 12758214 CTCCTCGAATCTCCAGCAG 59 12757322 12758102 GGACATATTGATGTCTTCCTTCTG 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 2 3 4 92 3R 13044801 13044891 TATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411 2 1 2 149 3R 13059256 13064632 AAGTATTCCTTTCACGGAGGA 58 13059127 13059145 TTGCCATTACCATTCCCGT 59 NA Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 2 2 2 103 3R 13224493 13224749 GTGATGAAGGCATCAAGCG 59 13224408 13224429 GCTGTACAGATAAAGTTCCGTG 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 2 3 7 83 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997308 13997326 TGATGTTCAGGACCTTGCT 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083565 2 1 4 83 3R 14073864 14073946 CAGGCAGAAGAAGTAGACCC 59 14073992 14074010 TTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 2 3 3 115 3R 14204681 14204957 GCAGTGAAGGATGAGATCG 58 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 3 5 6 81 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0083684 3 1 2 112 3R 14568805 14568826 CATCATAGTACCGTTACAGCTG 58 14564312 14568734 TACTCAACTCTTGCAACATCC 58 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 3 5 5 85 3R 14585655 14585786 ACCTGAAAGATCCGGACTG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 3 3 3 173 3R 15229536 15229625 ATCTTTCACTTGAACCGGAG 57 15229760 15229779 TGTTGATACGAAGTCCTTGG 57 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 3 2 3 102 3R 15464753 15464771 AAGGACCAGATCTGGTTCG 59 15464140 15464633 TTCCTGGAATCTCCTTCATGG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0083787 2 1 7 83 3R 15586691 15586709 TACACCTACCTCGCTTCAC 58 15586756 15589343 CGACTTTGAGGCAAGTACC 58 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 3 3 3 86 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045630 16045648 GATGAAGCTCCGGTATCAG 57 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0083931 1 1 2 79 3R 16563654 16563672 CTACAGCCCTTACGATCCC 59 16563489 16563507 CTTCCACATCCTCTGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067 3 1 22 81 3R 17200833 17200851 CAGTCCCAGAACTACAGTG 57 17181268 17200790 GTTCACCTAAATCTTGAGCCT 58 NA Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 2 1 1 185 3R 17357748 17357767 CACATTGATGAAGGTGTGGA 58 17357356 17357378 GCCAGACAATTATGGATTAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 2 3 3 81 3R 17447412 17448546 ATTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 2 1 1 65 3R 17694963 17694981 TGCTCTGTTGATGATCCCA 58 17694859 17694877 TTTCTGCTTCAAGCGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 2 4 4 80 3R 18614228 18614310 ATAGTTTCTATGCGGATCCCAG 59 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089715 3 1 3 158 3R 19118392 19119581 TTAGTTCAGGCTACAACACCA 59 19118254 19118272 TGTTGCTTTGCTGTACAGC 59 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 1 1 1 60 3R 19585716 19585734 CCATCTCTGTCGTCATCCA 58 19585613 19585631 CGCATGTAGTCAACTACCA 57 NA DesignNoJunction Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 3 2 3 165 3R 19762736 19763157 TACCATCTGCTTGCCTCAG 59 19762254 19762272 CGATATCCTTCTCGGAGGC 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 1 2 3 92 3R 19763164 19763182 CTTCAAGTATGAGCGCGAG 58 19762352 19762706 GACTCTTGAACGGATTCGTC 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 1 4 4 88 3R 19815554 19815572 AACTGCTCGCCTAAAGGAG 59 19815424 19815504 TATTTCCAGTTGTCTGCTCCA 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 2 2 7 88 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984968 19984986 CAACTGGAGATCAGCTCCT 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 3 4 7 114 3R 19985036 19985206 TTACCCATTACCCGTATAACGG 59 19984885 19984903 TTCGATACAGCTTGAGCGA 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 2 4 7 192 3R 19985469 19985487 GCACAGGCGTCATAAATCG 59 19985038 19985210 GTTATACGGGTAATGGGTAATGTG 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 2 4 7 192 3R 19985469 19985487 GCACAGGCGTCATAAATCG 59 19985038 19985210 GTTATACGGGTAATGGGTAATGTG 59 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 2 3 3 152 3R 20647311 20647329 TTGCACAAGAACAACACAG 57 20647445 20647531 ATAACGCTTGTTACCGAGG 57 NA InUTR Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 2 2 2 81 3R 20708755 20708773 ATCTACCACGACACATGGG 59 20708636 20708715 GTGACCAAATCCAAGTAATAGTCC 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 1 2 3 143 3R 20864227 20864382 AAACACAGCTAAATCGGTCG 59 20864001 20864019 TTGAACGGCGGATATTGGA 59 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 3 2 2 134 3R 21425811 21425829 GCCCTCATATCACAGAACC 57 21425927 21426004 GTAGGGTGCATATCTGACG 57 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 3 5 5 61 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451841 21451860 TTATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 3 2 2 84 3R 21505848 21505867 AGTTCCTTAGTTCGGTCACC 59 21505720 21505801 AAGCATGCCAACACTTCTG 59 NA Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 1 3 3 82 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293938 AAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 1 3 3 81 3R 22545020 22545096 GTTTCTTCATGCTCCGCAC 59 22545141 22545159 TCGTAGTTGATGGCTCCAC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 2 4 9 162 3R 22699731 22699803 CAACAGCTACCACACTCCT 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 1 6 6 65 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0301306 3 1 3 106 3R 24518685 24518908 AACTTCAGATGGACAAGCC 57 24518978 24518996 GTAGATGGAGCCATTGCTG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299751 3 1 13 99 3R 24732970 24732989 ACTATCACCAAGATCGAGGG 58 24733048 24733441 CTTCACTCATCTGCAGATACTG 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 2 9 10 185 3R 24957539 24957857 TTCCGAGATCTCAATCCCG 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085443 2 1 5 104 3R 25423028 25423046 GACATCGAAGGTCTTCCAC 58 25423185 25423506 TGCATACAGTTCACATGGTC 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 2 3 5 84 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423187 25423895 GCGTTGGACTTTCACATGG 59 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 3 2 2 101 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628320 25628339 GGATTCATCGAGTGCTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 2 5 6 206 3R 25705384 25705403 GCAGTTACTCTGACTAGCTG 57 25723060 25723079 CTTGTTGAAGCCGATGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548 1 1 3 80 3R 25823864 25823883 AATAAACCAGAGCACAGCTC 58 25823926 25824008 TGTCGGTTCTCCCTTTCTC 59 NA InUTR Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 2 2 2 97 3R 25873356 25873437 ACGCATTCAGGTATGTGGT 59 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582 1 1 3 86 3R 25960009 25960028 GTGGAAGACTTACGAAGGTC 58 25959758 25959776 TTTCGGCTCATGTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 2 10 12 114 3R 26398692 26398710 CTGGTGGAGAAGAACTCGT 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 2 2 2 80 3R 26926455 26926533 CACAGAAATACAGGCAATTGAG 58 26926396 26926414 ATACTTTCGAAGAGGGTGC 57 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201 2 1 2 110 3R 26925991 26926074 CCCTACAGAATGATCTTCATGG 58 26925902 26925920 GAGACTCTGTACAAACGCA 57 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816,FBtr0085815 3 2 2 84 3R 27440096 27440114 ATTATCTGGATCGCGAGGC 59 27440160 27440236 AGGTCAAACACCTTTATGCAC 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 2 6 6 85 3R 27553964 27554122 GGATGATCTAAATGAAAGTCGC 57 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300556 3 1 6 135 4 350045 363557 GCAAACACAAATACGAGTGG 58 349929 349947 GGAAGACGTTTCCGAAAGG 58 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 3 4 4 82 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383643 TTGTAGAACTGTGCAACGAG 58 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 3 7 7 109 4 471122 471820 ATCGTGATCTTAAGCCGGA 58 471891 471911 AGCCATAATTCCAGAATCCTC 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 2 4 4 80 4 738494 738512 CCCTAACAGCCTAAGTGCT 59 738550 739918 GATAAGCCATTAATGGTACTGACTG 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 1 4 5 107 4 1036233 1037010 TAGATTTAGAGTGGAGAACAGGC 59 1036148 1036166 AGTGCTGCAAAGTGTTGAG 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 1 4 7 147 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079844 1079865 AAGCTCACTGTATGAAGAACTC 58 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 2 4 4 121 U 1092306 1092325 CAGATCTAAGTTGCGATCCT 57 1092151 1092224 GTAAAGAGAATTCACTGCTCG 57 NA Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 1 2 2 80 X 94985 95066 TGAAGACACTCCCTATGGC 58 95108 95128 TCGATGATCTTAAAGCTGGTG 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0290017 2 2 8 174 X 394999 396028 ACTTGTTTGGAAGGCAACTG 59 396162 396183 TGCTAACGATCCAATTTACCAG 58 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 1 2 4 84 X 516383 516478 CATATCAGGGAGCTTCTTCAG 58 516524 516542 TCTTTCCGTTCAGGAAGTG 57 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 3 4 4 113 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522615 522633 ATCCTTGGACACCTTCAGC 59 NA Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 3 2 2 84 X 712813 712891 CGATCCTAACTGTGTTCTGTG 58 712749 712767 CGTGTGCATAGAGGAAAGC 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 3 5 6 163 X 1383725 1383743 AGAAGGTCATGGACAAGCA 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 1 1 1 192 X 1562841 1562859 GCCTACAAGATGACAAGCG 59 1562604 1562622 CAGTGTTAAGCACAGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 1 4 5 87 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 2 2 3 81 X 1821880 1821899 GAACCTTCGTCATCAACGAG 59 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 3 2 2 80 X 2160696 2160863 GTACAAGCAAGAAGGACGAC 59 2160635 2160658 GATAGTCTTGTCTCTGACTTTGAC 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 2 2 3 97 X 2234993 2235012 GTTGGTCAAACATGTGACCC 59 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070503,FBtr0070502 3 2 2 132 X 2590878 2590957 GATTCATTTAACCAAATGGGCC 58 2590767 2590791 GGTAATCTACAAATTCCTTCACCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 2 3 4 81 X 3846006 3846024 GGTGCCAATACTAGCTCAG 57 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 1 4 4 152 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 1 3 3 80 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309887 5309906 ATATGCGACCCAGATAGCAC 59 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 2 4 4 80 X 5317775 5317861 CGGAGAAGAATTCATCTTACCTG 59 5317901 5317919 GTACCCTTGATCATCGGCA 59 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 3 3 4 103 X 5794972 5794990 CGTCTAATCCAGAGACACC 57 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 3 2 3 125 X 6263370 6263389 TGGAGTTTAAGTTCAGCTGG 57 6263476 6263564 ATACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944 2 1 2 137 X 6483744 6483763 GAAGTCACCTACAGGAGAGC 59 6483863 6484081 TTAGGTGGATGTAGCCCAC 58 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 2 3 3 91 X 7991097 7991203 ATCGAGAGGATGATCCCAC 58 7991024 7991042 CGGATGGCTGAATATGTCG 58 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 2 2 3 103 X 8381364 8381382 GAAACGGAGATGTACACGT 57 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 2 4 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442550 8444125 TCATTCATGCCTGTATCGC 58 NA Drosophila melanogaster 61 CG32710 FBgn0052710 FBtr0071252 2 1 1 147 X 8713924 8713942 AAACAGCAGCAACTACAGC 59 8714662 8714680 AGCACTTTGTTGCGTAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 3 2 2 96 X 9857824 9857844 ATTCGATCAGGATAACGACGA 59 9857688 9857767 AAACAAGTTGCTCTCGAAGC 59 NA Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 2 2 2 217 X 10017034 10017052 GTCCAGGAAAGTTCATCGC 58 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 2 3 3 81 X 10373678 10373696 CTGAAGTACTTGTTCCGCG 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 1 2 3 95 X 10639931 10639949 AAGAGTACCACCGGATTCG 59 10640006 10640118 GAGAAAGTCGTTGTAGGTGAG 58 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 2 4 4 80 X 10655534 10655625 ACCGTATCCCGATGATATTATCTG 59 10655477 10655497 ACCTTGGACATAATGGACCAG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073489,FBtr0073485 2 4 15 112 X 11284561 11289280 CAATCTGGATTCGGTGAATGG 59 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112813 1 1 15 81 X 11296749 11296767 TCTACAGGGTGGAGTTACC 57 11296812 11299316 TCCTCGGAAGGATAGTCAG 57 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300201 2 1 7 81 X 12124392 12170551 CCATTCCAGCAGGTTTCAC 59 12170593 12170614 TACGAATATTAAGGCGATGCTC 58 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 2 2 5 86 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483126 12483145 GAATCACTAACTGGTGTGCC 59 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073747 1 1 3 119 X 12976563 12976650 AGTAGCATCGGTCAATCGA 58 12976462 12976481 ATCCGTGATCAATGTTTGGT 57 NA Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 3 2 2 60 X 13280857 13280877 TGATCAGTACCCGATTCACAG 59 13280751 13280770 TTGACCACACGCTTAAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787 1 1 2 123 X 13306613 13306631 AAGCTCTGGGAACAGTTCC 59 13306438 13306529 TTCCTTGGCATTATCATTCAGG 58 NA Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 2 1 1 108 X 14802755 14802773 GAATCCCGACTGGAGAGTG 59 14802270 14802288 ATTCCACGTGAAGTTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 1 3 3 80 X 15856480 15856583 GGAATTTGAATGCAAGGCGA 59 15856419 15856437 GGAGTTCCGTCCTTAACCA 59 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 2 6 9 187 X 16270360 16270691 AACAGTGGTATCTGAATGGC 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 3 6 9 188 X 16270359 16270691 GAACAGTGGTATCTGAATGGC 59 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074370 3 1 7 257 X 16588376 16588659 TAAGCATGTCACTAGCAGC 57 16588137 16588155 CATCGTGCTTATGACGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474 3 1 2 103 X 16700491 16700513 GATTAAAGTACATCGCCGAAGAG 59 16700573 16700649 ATATGAATTTGTCCGCGATCTC 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 1 5 5 85 X 16719520 16719541 CTGGATGGTACTTCGAATTTGG 59 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 1 7 9 72 X 18267444 18267466 CGTACAATAAGATCTTCACCGAG 59 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 2 3 3 90 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317591 18317609 GCACTAATCGAATAGGCCG 58 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 3 2 4 98 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040090 19040108 TGGAGAATCGTTGACTGCT 59 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 2 2 4 80 X 19470778 19470799 CCTCCCTACTTTAACATGAACG 58 19470420 19470737 GTCGTTCTTCGGAAGAGTC 58 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0113007 1 1 2 87 X 20907655 20908645 AAGACTACAGACCGACGAG 58 20908696 20908714 GTGCTGCACAAAGAAACTG 58 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 2 2 4 132 X 21296199 21296519 CCTATATGAAATGGAGCGTCC 58 21295942 21295960 ATAGAGTCTGCCGTTCAGG 58 NA Drosophila melanogaster 61 tRNA:E4:56Fc FBgn0011850 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U76:54Eb FBgn0063376 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32481 FBgn0052481 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3113b FBgn0086064 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A1494 FBgn0086073 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:85Cb FBgn0053551 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-13aS FBgn0082180 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:P FBgn0013702 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tilB FBgn0014395 FBtr0077345 2 1 1 81 X 21851782 21851863 TGGTGCTTATCACCGAAGAG 59 21851907 21851925 AAGGAGATCTCTTCCAGCG 58 NA Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 2 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 3 2 2 80 X 21195589 21195745 CGCTTCCAGTATTCGATCG 58 21195788 21195807 ACCTTAACGTTCTCTAAGCG 57 NA Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 2 2 2 98 X 20919537 20919555 CTCAAGTCGGATGCAACTG 58 20919616 20919701 CAGGACAGAACCATCATCCT 59 NA Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 3 2 2 108 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412950 TATAGTGCCATCCATGACCTC 59 NA Drosophila melanogaster 61 Tak1 FBgn0026323 FBtr0077319 3 1 1 115 X 20393465 20393542 GATCTACAAGGGTGAACGC 58 20393368 20393386 CTATGTACTGCATCGACGG 57 NA Drosophila melanogaster 61 Rab10 FBgn0015789 FBtr0077337 1 1 1 84 X 20123500 20123588 AATATAGACGAGCACGCCA 59 20123636 20123654 TGTTGACCACCCTCTTGTC 59 NA Drosophila melanogaster 61 CG14232 FBgn0031061 FBtr0074813 3 1 1 89 X 19597498 19597516 CTCGAGGAGGGTTACAAGG 59 19597222 19597445 AGCGTACAGCTTAAACTGC 58 NA Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731,FBtr0074732 1 2 2 96 X 19492088 19492106 TTTCGTCTTCACGTTTCCG 58 19492235 19492482 CCTTTGGCATAAACATTCTGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14193 FBgn0030994 FBtr0074670 1 1 1 60 X 19084412 19084430 AGAAGGAGAACGATCAGCA 58 19084452 19084472 TCCTTGGATTCATCCTTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7058 FBgn0030961 FBtr0301153 1 1 1 80 X 18702965 18703046 GTACCTGAAATCGAATCAACC 57 18703085 18703106 CTTACACATGATTTCCAGTGAG 57 NA Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606,FBtr0074605 2 2 2 91 X 18641012 18641030 GAACAGCAGTTAGGAGAGC 58 18640886 18640904 GTCAAATGGATGGCAAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300205 1 1 9 79 X 18266414 18266434 CAACTGCAACATACAATACCC 57 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300206 2 1 9 60 X 18266546 18266564 GGATGTTAGTGCAGAAGCA 57 18267073 18267091 GATTGGCCTGTATCACGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vps4 FBgn0027605 FBtr0074504 2 1 1 102 X 17802739 17802853 CATCAAATATGAGGCACAGGG 59 17802914 17802935 CTTCTTCAGGTACTCCTTTAGC 58 NA Drosophila melanogaster 61 CG6788 FBgn0030880 FBtr0074495 1 1 1 87 X 17783081 17783099 AGGACAACGATGCCTATCG 59 17783150 17783246 CCATTGAGCATGCTCTTGG 59 NA Nonspecific Drosophila melanogaster 61 Ucp4A FBgn0030872 FBtr0074464 2 1 1 130 X 17739670 17739688 CTTACATCGTTTCCGTGGT 57 17739779 17740724 GTATTGCATATTGGACTTTCCC 57 NA Drosophila melanogaster 61 CG12986 FBgn0030868 FBtr0074474 3 1 1 140 X 17713439 17713457 TCCAGACTGCTACATGTGC 59 17713317 17713335 AATATCCTCAGGCGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 2 1 1 60 X 17484485 17484560 AGGACACTGTGAAACAGCA 59 17484583 17484602 GATGGATTCCTTCGATTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 xmas-2 FBgn0028974 FBtr0074404 1 1 1 80 X 17051538 17051617 CGACAGTATGAGTTGGTGGA 59 17051477 17051495 GTCTCGTGGTGGTAAAGGT 59 NA Drosophila melanogaster 61 CG4955 FBgn0030814 FBtr0074382 2 1 1 60 X 16976649 16976670 ATTACCTTCCTATTGGAGGTCC 59 16976763 16976781 ATGTTATCGTGCAGATGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13002 FBgn0030804 FBtr0074343 2 1 1 102 X 16783945 16784023 CTTCGAGGGATTCAGAGCA 59 16784089 16784107 GACGAATCGGTGTATTGCC 59 NA Drosophila melanogaster 61 CG9777 FBgn0030764 FBtr0074287 2 1 1 71 X 16525850 16525868 GCATGGAAAGAAGTTCCCA 58 16525733 16525752 GGAAGTATCCATCACAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298,FBtr0290121,FBtr0111023 3 4 4 80 X 16383686 16383704 ACGATGTTCATGGCAATGG 58 16383541 16383645 GGTGAAGAAATAGTTGCCACTC 59 NA Drosophila melanogaster 61 eIF-2alpha FBgn0004925 FBtr0074300 3 1 1 184 X 16340374 16340392 TGTTGAGCAACATCAAGCG 59 16339909 16340227 CATTACATAGAGTGGCGGTG 58 NA Drosophila melanogaster 61 dpr18 FBgn0030723 FBtr0074206 1 1 1 80 X 15962948 15963028 TCTCACTGTCTTGGAACCC 59 15963066 15963090 CTTCCAGACTTATAATAACGATCCC 59 NA Drosophila melanogaster 61 CG12395 FBgn0030722 FBtr0074260 3 1 1 60 X 15956193 15956212 TCGACGAACTTCTAATGCAG 58 15956152 15956170 GTTGCGTTGCTAGTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL3 FBgn0030686 FBtr0074090 2 1 1 108 X 15655311 15655329 TTTGGTTATTCTGCACCGG 58 15655401 15655478 CTATTTCCACTGAGCCGGA 59 NA InUTR Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074200,FBtr0074201 1 2 2 71 X 15639377 15639398 GGACTTTCTCAGCTATGATGAG 58 15639177 15639195 ATGTGCATCGTAACCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074201 2 1 2 99 X 15638918 15638936 CAACATCAGTACGCTGTGG 58 15638448 15638857 GGAGGTTTCCTTAACAACAGC 59 NA Drosophila melanogaster 61 CG6294 FBgn0030640 FBtr0074034 1 1 1 171 X 15358297 15358315 CTACGAGGAGTTCGAGGAG 58 15358450 15359773 ATTGGTAAATCTCGCGCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 mus101 FBgn0002878 FBtr0073817 2 1 1 60 X 13619074 13619094 GCAGTACAATCTGGACTTCCT 59 13619115 13619134 CTTGCCCTCTTCTGTATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 1 2 2 60 X 13280859 13280881 CAATTGATCAGTACCCGATTCAC 59 13280755 13280775 CCACACGCTTAAACAGATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Tim9a FBgn0030480 FBtr0073775 2 1 1 60 X 13279620 13279703 GATTCCGAGGAGAAGTGCT 59 13279727 13279745 CGCGTTGGTTCATCTTCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4318 FBgn0030455 FBtr0301690 1 1 1 60 X 13048246 13048264 ATCCTACAAGTGTTCCCGA 58 13048204 13048222 GTGGTTCTTAAGGGCAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 3 3 3 83 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346757 12346778 CCAATTAGCATTTCGTAGAGCA 59 NA Drosophila melanogaster 61 CG2076 FBgn0030263 FBtr0073428 2 1 1 96 X 10985809 10985827 TGCTCTATGACACTCAGCG 59 10985887 10985968 TAGATCGACATTGAGGCGT 58 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0071509,FBtr0273444 2 2 2 71 X 10499258 10499374 ATAATGCCACAGAACAGCG 58 10499205 10499223 GTACATCAGGTCGATCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34319 FBgn0085348 FBtr0112521 1 1 1 60 X 10149201 10149539 CTATCAACTACAAGCGCGA 57 10149159 10149177 CGTATCTCAAAGTCCAGCA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973 1 1 2 81 X 10047916 10047936 GATTAGCGGACAACAATAGCA 58 10047974 10048054 GGGCTTAGGATAAAGAAATCATCG 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 3 2 4 85 X 9893262 9893282 GAATCATTGATAGCCGATCGC 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 CG12056 FBgn0030099 FBtr0071305 1 1 1 60 X 9086933 9086951 CCAAATTCAATGGCGAGGA 58 9086975 9086993 AAGACGGAACCGAGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12057 FBgn0030098 FBtr0071304 1 1 1 71 X 9086143 9086161 GTACAAGAACTCCGTGCTG 58 9086196 9086214 CTGACCAAATAGACGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 1 3 3 63 X 9048262 9048419 CTTGCAGGAAGCATCTGAG 58 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7065 FBgn0030091 FBtr0071299 1 1 1 114 X 9038971 9040050 ACCTTCAAAGGTACCAACGA 59 9040127 9040145 AAGCATTGGCCAATTTGGG 59 NA Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0301805,FBtr0071284 2 2 2 60 X 8975460 8975478 AAAGTGGAAGGGCTATCCG 59 8975502 8975520 ACAGTCGAGATTCTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32712 FBgn0052712 FBtr0300386 3 1 1 116 X 8327360 8327431 CTCCAATGCGATGATGCTG 59 8327262 8327281 TAGACAACCAACTGGTTGCA 59 NA Drosophila melanogaster 61 CG1636 FBgn0030030 FBtr0071171 1 1 1 80 X 8167780 8168326 TCTTCCAGTTCTTTCTGAAGTC 58 8168367 8168385 AGGCGATGTTCCAAATGAC 58 NA Drosophila melanogaster 61 CG2116 FBgn0030003 FBtr0071152 3 1 1 60 X 8024199 8024218 TGAAGGATTTGACGGATGAC 58 8024238 8024259 CTCATATCCAATTCCCTGACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 1 2 2 104 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997746 7997831 GAATCCTGCTTGTAATCCGG 58 NA Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114,FBtr0071112,FBtr0071113 1 3 3 60 X 7983654 7983675 GATCTACCATCCGAACATTGAC 59 7983615 7983635 CTGATTGATAACATCCAGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15330 FBgn0029987 FBtr0071099 1 1 1 60 X 7850517 7850535 CAGTCCCATGTCCTCTCAG 59 7850554 7850577 GACCGGATAGAAATAGACATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ykt6 FBgn0260858 FBtr0071093 1 1 1 99 X 7814825 7814933 GTTCATGACTTTCGCTTCGA 59 7814995 7815013 CCGCACATAGACATGACAC 58 NA Drosophila melanogaster 61 CG1409 FBgn0029964 FBtr0273372 3 1 1 60 X 7752590 7752608 GATCAGGAACTGGAACGGA 59 7752630 7752650 GTAGGATTGAATGGGAGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32732 FBgn0052732 FBtr0071039 2 1 1 83 X 6853075 6853095 GCTGTTAACACTGGAGAACAG 59 6852959 6853031 GTCTACGAAACCATTGTGCA 58 NA Drosophila melanogaster 61 Spt6 FBgn0028982 FBtr0070896 3 1 1 81 X 6163484 6163568 CATCTTTACAGACGCATCAC 57 6163611 6163630 CTCGTACTTTGAGAAGTCGT 57 NA Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 1 2 2 80 X 5964739 5964903 GTCTCCTGGTATTGTACTTTATGC 59 5964682 5964700 GGAAGAGAAAGGCGATGGA 59 NA Drosophila melanogaster 61 CG32755 FBgn0052755 FBtr0070862 2 1 1 133 X 5844898 5844916 CACTGCTCTTTCTCAACGG 58 5845012 5845086 TTTCTCCTTCATGGTGACCT 58 NA Drosophila melanogaster 61 SPR FBgn0029768 FBtr0070778 3 1 1 91 X 5373107 5373127 ATCACCATTATCTCGAACTCC 57 5373179 5374875 ATAGCCATTCCCATTAGCAC 57 NA Drosophila melanogaster 61 CanB FBgn0010014 FBtr0070764 3 1 1 104 X 5226823 5226842 GGAATTTAACAATCCAGCGC 58 5227131 5227421 TTAGTTCTCTGGTCTAGATCCA 57 NA InUTR Drosophila melanogaster 61 CanB FBgn0010014 FBtr0070764 2 1 1 103 X 5226824 5226843 GAATTTAACAATCCAGCGCA 57 5227131 5227421 TTAGTTCTCTGGTCTAGATCCA 57 NA InUTR Drosophila melanogaster 61 CG3309 FBgn0029756 FBtr0070798 1 1 1 151 X 5222326 5222344 TTCACGACAGCGAATTTCG 59 5222134 5222213 CATGTTCTTCTGGTTGTCCAC 59 NA Drosophila melanogaster 61 Sas10 FBgn0029755 FBtr0070751 2 1 1 60 X 5211959 5211977 GGACAATGTAGAAGCAGCG 59 5212000 5212019 GGTTATATGGCTCAGCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 3 3 3 131 X 4554210 4554300 ACACAGATCGTGGTGATATCC 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 CG3527 FBgn0029714 FBtr0070678 3 1 1 151 X 4446138 4446156 GAAGCGTAAGTTTGTCGGT 58 4446271 4446353 AAGTGTTGTGCACCTTCAC 58 NA Drosophila melanogaster 61 CG32778 FBgn0052778 FBtr0070622 3 1 1 81 X 3978726 3978830 GGGATCCCAGTGGTTACTC 59 3978875 3978893 TAACCGTGGTATCCAGCAG 59 NA Drosophila melanogaster 61 CG2938 FBgn0029685 FBtr0070627 1 1 1 80 X 3829345 3829363 TCCAAGGGCCGATTTAAGG 59 3829203 3829301 CCTTGTGTCAGTGAGGGAG 59 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 3 2 2 85 X 3464346 3464364 ATCGTGACCGATGAAGGTC 59 3464413 3464716 CGATGCGAATAGGGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32791 FBgn0052791 FBtr0070588 1 1 1 80 X 3408949 3408969 CTGATGTCCAAATCGAGTGTC 59 3408194 3408907 CAATCATCTCACCCGTGTC 58 NA Drosophila melanogaster 61 CG12535 FBgn0029657 FBtr0070534 1 1 1 80 X 3286919 3287072 TACGGAATCGTAACGATCTCC 59 3286859 3286878 GAAGCACTCCATCGTTAGGA 59 NA Drosophila melanogaster 61 CG14417 FBgn0040353 FBtr0070566 2 1 1 60 X 2770447 2770467 GACAAGTACCTACGTCATTCC 58 2770407 2770425 TGGGAAATTGAACGTCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8636 FBgn0029629 FBtr0070446 2 1 1 100 X 2504327 2504345 AAATCCGCTTAACTCGTGG 58 2504182 2504200 CCCAGGAGGATTTGATCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nmd3 FBgn0023542 FBtr0070425 2 1 1 103 X 2077719 2077737 CCATTGGTTCTGGTCAACC 58 2077574 2077654 AAGGGAGCTCTGAAATAGACC 59 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 1 2 2 157 X 2014215 2014233 CTTGGTTCTGGCAGAATGC 59 2014015 2014097 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16903 FBgn0040394 FBtr0070434 3 1 1 95 X 1972799 1972875 CACAGGAAGTCGAAATCCTC 58 1972723 1972743 GCCATCACCTAGATTATTGCT 58 NA Drosophila melanogaster 61 CG3573 FBgn0023508 FBtr0070317 3 1 1 80 X 1820404 1820489 AAGCAACTCATGAATGACGA 58 1820530 1820550 GTACAGATAGTCGATCAGCAG 57 NA Drosophila melanogaster 61 Rbcn-3B FBgn0023510 FBtr0070316 1 1 1 193 X 1803426 1803444 TCCATAGCGGAGGAATCAC 59 1804791 1804809 ACCAGATTGGTACTCACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 1 2 2 65 X 1795034 1795103 TAGAAGGCACACTCCTGAC 58 1794987 1795006 TTATGACTAGTCCTCCCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Vps26 FBgn0014411 FBtr0070311 2 1 1 93 X 1768277 1768295 TGCTGCTATTCTACGACGG 59 1768431 1768449 ATCTTAATGCCCTGGTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 ns3 FBgn0028274 FBtr0070297 2 1 1 90 X 1356601 1356687 CTTATGGATACAATCGCGGT 58 1356530 1356551 CCATTGACGTAGTCTTTAAGCA 58 NA Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 3 3 3 80 X 1187401 1187419 ATGCTCGGTATACAGCCTG 59 1187279 1187359 CTCAAAGAAGTCCAAATGCCT 58 NA Drosophila melanogaster 61 CG3706 FBgn0040342 FBtr0070189 1 1 1 60 X 826121 826139 CGAAGAGCTATGACGTGGT 59 826079 826097 ACCATTAGTTTCTGGCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13367 FBgn0025634 FBtr0070121 2 1 1 137 X 539939 540033 CCTAATCGGACCCGATGAG 59 540133 540152 GATCTCTGGGCAGTGTACTC 59 NA Drosophila melanogaster 61 y FBgn0004034 FBtr0070071 3 1 1 91 X 250884 250902 GCTCTACCTGTTGGAGTCG 59 253656 253674 ATATAGGTCAGAGTGGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Or1a FBgn0029521 FBtr0070070 2 1 1 125 X 210302 210320 ACCTTCCTCCTAAACACCG 59 210409 210537 CTGCTGTGCGAAATATCCA 58 NA Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 2 3 3 98 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242175 242193 CTACTGATGTGGCATCTGG 57 NA Drosophila melanogaster 61 CR41583 FBgn0085805 FBtr0114259 3 1 1 63 U 6961726 6961744 ATTAGCCAACGTATGCCCA 59 6961681 6961700 TATTACTATGCACGCGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 1 1 1 71 U 7799099 7799178 CGGGAAGCCATGATTACTC 58 7799213 7799231 AAACGGTACCAAGTGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG41130 FBgn0069921 FBtr0100311 1 1 1 60 4 1222997 1223016 AGACGTTACAAATGTCGCAC 59 1223035 1223057 CTGCAGATATTAGGTCCATTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kif3C FBgn0039925 FBtr0089196 2 1 1 88 4 1186045 1186063 TCATCTTTGGTGGATGGCA 59 1186111 1186195 GTATTCCCTCCTAAGGAATCCTG 59 NA Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 1 2 2 80 4 1164123 1164144 CAACATATAGGGATCCCTTCAC 58 1161983 1164083 TCATTCGTAATGATCCCAGC 57 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 1 3 3 92 4 1150106 1150202 ACAACATTCGACTTGGAGAC 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 yellow-h FBgn0039896 FBtr0089115 2 1 1 85 4 250187 250546 CAAGTTTCAAGGAGTTCATGG 57 250592 250611 GTACTTGGCGTACTCTTGAG 58 NA Drosophila melanogaster 61 yellow-h FBgn0039896 FBtr0089115 1 1 1 83 4 250189 250548 AGTTTCAAGGAGTTCATGGTG 58 250592 250611 GTACTTGGCGTACTCTTGAG 58 NA Drosophila melanogaster 61 CG2219 FBgn0039889 FBtr0089153 2 1 1 92 4 199495 199570 TATACACGTTGCACTGATGG 58 199422 199440 AGCGGTACGCATTAATTCC 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 snRNA:U6:96Ab FBgn0004189 FBtr0084651 1 1 1 61 3R 20382457 20382475 GAGAAGATTAGCATGGCCC 58 20382500 20382518 AAATGTGGAACGCTTCACG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Acf1 FBgn0027620 FBtr0085845 1 1 1 80 3R 27624579 27624664 GGCACAGTAACATGAATGGT 58 27624707 27624725 ATAGGCGCAAAGAGTTACG 58 NA Drosophila melanogaster 61 nero FBgn0261479 FBtr0085863 1 1 1 60 3R 27573164 27573182 CAAATCGAGGCCATTGGAG 59 27573122 27573140 GAAAGCGCTCTTTCAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750,FBtr0085749 3 2 2 60 3R 26789628 26789646 TTCTCTTGGGACAGGAAGC 59 26789586 26789607 ATCTTCTTGGCCGATTATACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dj-1beta FBgn0039802 FBtr0085703 1 1 1 134 3R 26633378 26633468 GAATAACTATAGCTATGTGGACGAC 59 26633560 26633578 TCCTGGACTTTCTCCTTGC 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 1 12 12 84 3R 26398250 26398333 ACATTAAGAACATCTCGGACG 58 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 PH4alphaNE1 FBgn0039780 FBtr0085688 1 1 1 80 3R 26325808 26325830 TATCTTACAAGGGAACTGAGGTC 59 26324897 26325768 GATGGAGGATAGCTCGCTC 59 NA Drosophila melanogaster 61 CG15535 FBgn0039764 FBtr0085629 3 1 1 109 3R 26249335 26249355 CCAAATAAACCGGAAATTCGG 58 26249246 26249264 TTATAGGCCTTCACCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mlc2 FBgn0002773 FBtr0089746,FBtr0089747 1 2 2 73 3R 26000247 26000265 GATTCAGTGTGCTCTGACG 58 25999523 26000210 TTCTTCTCATCGGCCATGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11498 FBgn0039749 FBtr0302562 3 1 1 92 3R 25981535 25981646 TCTTTACCAGATTGACCACCC 59 25981463 25981481 GATTAGCGAACAGACGCAC 59 NA Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 3 2 2 80 3R 25948594 25948613 TGGGTCTGGATTATCTGGTG 58 25948474 25948553 CTACAACTAATGGCTTCGGTG 59 NA Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 2 2 2 131 3R 25817723 25817812 TATTTGAGCTGCACAGTCCT 59 25817611 25817629 CAGGTATGTCCAGAGGCAG 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 2 2 3 133 3R 25574564 25574582 TATAACACTCGTTGTGGCG 58 25574374 25574392 AATCATCTTCAGGGTGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Bub3 FBgn0025457 FBtr0085465 2 1 1 108 3R 25500919 25500937 TCTTCTTGGGACGGAACAC 59 25500776 25500847 GCACTATGTCCATGAAGGC 58 NA Drosophila melanogaster 61 CG1458 FBgn0062442 FBtr0085405 3 1 1 65 3R 25049001 25049019 TACTTGTCAAGTCTGCCGG 59 25048481 25048973 CCAATCCTTGAAGGAGAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG14518 FBgn0039621 FBtr0085341 1 1 1 111 3R 24850742 24850817 CCTTATCAATGTGATGCTGTC 57 24850890 24850908 TATTCCTGCTAACAGCACG 57 NA Drosophila melanogaster 61 Or98b FBgn0039582 FBtr0085288 1 1 1 117 3R 24178407 24178425 ACTGTTTCATTACGGCTGG 58 24178506 24178576 CCAGGGATATACACTGGGA 57 NA Drosophila melanogaster 61 ALiX FBgn0086346 FBtr0085241 2 1 1 80 3R 23525201 23525223 CAGATACCCTTTAAGTGGAAGGA 59 23525076 23525161 CAAGGAGGTGTGAGTCAGG 59 NA Drosophila melanogaster 61 CG42534 FBgn0260487 FBtr0300898 3 1 1 85 3R 23187092 23187174 CTTCAGATAAAGATGGCCTCAC 59 23187220 23187238 ACACAGGCCTATCAAGGTG 59 NA Drosophila melanogaster 61 amon FBgn0023179 FBtr0085048 2 1 1 107 3R 22526613 22526631 ACATATACAGCGCCTCCTG 59 22526453 22526543 CATTTCGACCCTCATTGACG 59 NA Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085056 1 1 2 60 3R 22451238 22451320 GCGCCTTCATCGTAATGTG 59 22451196 22451216 TAGTTGTAGCCGAGCTTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11902 FBgn0028647 FBtr0300735 1 1 1 80 3R 21161569 21161588 CTTTGGAACTTAAGTGGCAG 57 21161631 21161703 CCACTTGATCTTCATCGCT 57 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 1 2 2 80 3R 21160213 21160236 GATATGTCACCAATCTGTATCGTC 59 21160101 21160178 AGTCTTCTTCATAATCCTCTCCG 59 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 2 3 3 92 3R 21133345 21133423 ATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG31097 FBgn0051097 FBtr0290052 2 1 1 107 3R 21122398 21122419 TCTCATCGACTTCTTGAGAGTC 59 21122253 21122332 GCAAAGAATGCAGAGAAAGTG 58 NA Drosophila melanogaster 61 CG34110 FBgn0083946 FBtr0110797 2 1 1 81 3R 20995829 20995911 GGATGAGACAGTTTGAAGAAGAG 59 20995770 20995788 ACCAGATATGGAGCCAGGA 59 NA Drosophila melanogaster 61 CG5706 FBgn0039175 FBtr0084637 1 1 1 139 3R 20076560 20076580 TAAACTGCAATAAGACCGCTG 59 20076384 20076459 GAAGTAGCTGGGATCCTCG 59 NA Drosophila melanogaster 61 Spase22-23 FBgn0039172 FBtr0084564 3 1 1 60 3R 20055285 20055305 CAAGTACTACTTCTGGGACGA 59 20055245 20055263 GTATAGCGATACGTTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 1 2 2 80 3R 20014178 20014251 TGGCGATATGGAGATTCTCG 59 20014117 20014135 TCCTCCGAACTGTACTCCT 59 NA Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0084587 1 1 2 80 3R 19890049 19932563 TACAGACGAAATATCCGGAGG 59 19889989 19890008 CACGGATACGTGTTGTACTG 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 2 4 4 82 3R 19816489 19816507 ATTAACTTCCGCCGAGGAC 59 19816363 19816443 GATGTGCTGTGTTCTGACG 59 NA Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445,FBtr0084472 3 2 2 85 3R 19542153 19542235 GGATCTGCTACAGGAATCCA 59 19542087 19542105 GATAATCGGACTGGCAGCT 59 NA Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 1 2 2 80 3R 19516878 19516898 GCAAGTACAACGAAATGTTCG 58 19516755 19516839 CGCCAGAATCATTCTTAGTACG 59 NA Drosophila melanogaster 61 CG13827 FBgn0039068 FBtr0084376 3 1 1 90 3R 19084259 19085408 GCGAGATAAGGTGATGAAGG 58 19085461 19085479 GTATCGCTTGGCTAGTTCC 58 NA Drosophila melanogaster 61 Gclm FBgn0046114 FBtr0084336 2 1 1 60 3R 18511818 18511839 ACGGAATGAGATAAGTATCGGT 59 18511779 18511797 CACAGACTCTGTGGAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31161 FBgn0051161 FBtr0084271 2 1 1 93 3R 18443667 18443685 AATGGAGATCGATGTGCTG 57 18443741 18443814 GGCCTTCATCATAATCTGCT 57 NA Drosophila melanogaster 61 CG13843 FBgn0038993 FBtr0084269 2 1 1 80 3R 18435812 18435880 ATCGTCAATCAGTCAAACACC 59 18435922 18435940 TACGCGTTGATCTAGCTCC 59 NA Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 1 2 2 87 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128542 18128560 ATACACAATGATGGGCAGG 57 NA Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 1 2 2 134 3R 17844428 17844509 GGGCTACGGATAACTACGG 59 17843785 17843803 AGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 3 5 5 80 3R 17349341 17349360 GTGTCATAGGCAATGAATGC 57 17349403 17349484 GTCTCTTGTAGCGTGTTCC 58 NA Drosophila melanogaster 61 CG31189 FBgn0051189 FBtr0300817 3 1 1 102 3R 16870996 16871015 GATTACCCTGACCATCAAGG 57 16870856 16870933 TATGATCCATCGATCCAAGTC 57 NA Drosophila melanogaster 61 CG15696 FBgn0038833 FBtr0083968 1 1 1 78 3R 16672980 16672998 TCTGGAGGATCTCCTCCAG 59 16673040 16673058 GATGGTACCGGGTGTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0083993,FBtr0110823 1 2 2 63 3R 16647076 16647157 AGCAATACCAATACGAACAGG 58 16647033 16647051 TGCTGATATTGGACCGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG16953 FBgn0038809 FBtr0300803 2 1 1 80 3R 16411006 16411139 CTCTTCTGCAGACAGTTACC 58 16410945 16410963 ACACATTGATGGTGGATCC 57 NA Drosophila melanogaster 61 att-ORFB FBgn0067782 FBtr0090034 3 1 1 61 3R 16379980 16379998 ATTTATCCATAGTCGCGCA 57 16379884 16379902 TATCAGGCTGATCACCACC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 3 2 2 98 3R 16334752 16334880 GCAACATTGTATTTGGTACTGG 58 16334675 16334694 GGACGAACAGGAACATTTCC 59 NA Drosophila melanogaster 61 CG17199 FBgn0038775 FBtr0083874 1 1 1 60 3R 16034565 16034586 AAAGGAAGTGCCCAAATTAGTG 59 16034526 16034544 CTCCGTTGATGTTGTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4936 FBgn0038768 FBtr0083831 2 1 1 85 3R 15858816 15858835 CATGTATCCCTCCCAGAGTC 59 15858883 15859059 AATGACCACAGATCTCGCA 59 NA Drosophila melanogaster 61 CG4854 FBgn0038766 FBtr0083830 2 1 1 83 3R 15854486 15854504 CAATGTCTACTCAGAGCGC 58 15854550 15854634 TGACAGATTTCGCATTCGTG 59 NA Drosophila melanogaster 61 CG4733 FBgn0038744 FBtr0301117 2 1 1 80 3R 15723303 15723321 TCTATTCGGTAAACCGCAG 57 15723365 15723476 GACTGATCATCTCCAGCAG 57 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 2 2 2 80 3R 15708032 15708052 TTCTGGATGGACTTCTTTCTG 57 15708094 15708168 CTCGAGGATCAGAATCGGA 58 NA Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 2 2 2 80 3R 15697097 15697118 ACATGAACTATTTATGGCTGGG 58 15696708 15697056 AGGCGGAGATACCAATCTC 58 NA Drosophila melanogaster 61 CG31220 FBgn0051220 FBtr0302358 1 1 1 80 3R 15475717 15475735 CGATCCAGCCAATTACACC 58 15475776 15475860 TAGTAAGCCATCGTATATCGCA 59 NA Drosophila melanogaster 61 Cpr92A FBgn0038714 FBtr0083811 2 1 1 122 3R 15424203 15424555 TGCTGAAGATTTCCCTGCT 59 15424099 15424119 GTGCATATCCTCCATAGTGGT 59 NA Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 2 2 2 119 3R 15279980 15282853 CTAATGAGATCGGACCTGGA 58 15282935 15282953 GAAGAACTTCACATCGCCC 58 NA Drosophila melanogaster 61 CG5217 FBgn0038694 FBtr0083741 2 1 1 83 3R 15073559 15073577 ACAAGGACCTGGGAAAGTC 59 15073383 15073514 TCGAAGGATCTTGAACATCCT 59 NA Drosophila melanogaster 61 CG6026 FBgn0038676 FBtr0273301 1 1 1 141 3R 14867812 14867895 AACCATTGAAATTCCCTGCC 59 14867999 14868017 GAAGGTGGTGATGTACCCA 59 NA Drosophila melanogaster 61 CG6013 FBgn0038675 FBtr0083714 1 1 1 146 3R 14857610 14857628 AATCGAGGCGATAAACGAG 57 14857737 14857819 TCATTTACACTGAGCACCAC 58 NA Drosophila melanogaster 61 Rh2 FBgn0003248 FBtr0083697 2 1 1 128 3R 14726196 14726216 GTCATTTGCTACTTCGGACTC 59 14726305 14726406 GTACTTGGGATGGCTAATGC 58 NA Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083664 2 1 2 157 3R 14495275 14495293 AAGATCAGCAGTAACCGCA 59 14495409 14496871 CGCAGTATAGAATAGTCGTTAGTC 58 NA InUTR Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100275,FBtr0083603 1 2 6 110 3R 14080951 14081049 GTTTCCCAAAGTGGCACTC 59 14080859 14080879 TGTTCATTCTGATGTGCATGG 59 NA Drosophila melanogaster 61 Atg8b FBgn0038539 FBtr0083533 3 1 1 62 3R 13550373 13550393 CTTCGTAAACAATGTGATCCC 57 13550331 13550349 AAGTGCTCCTGGTACAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14325 FBgn0038531 FBtr0289974 3 1 1 81 3R 13453577 13453595 TGCGGCGTACATAAATCAG 58 13453639 13453816 AAGCGGAATGTGATCATTCG 59 NA Drosophila melanogaster 61 l(3)07882 FBgn0010926 FBtr0083504 1 1 1 238 3R 13363288 13363306 AAATGAAACCCTTGGCTCC 58 13363007 13363086 CTCCTTGTCACTTTGCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 3 5 5 87 3R 12920387 12920405 TCTCGGTGAAGTACGATCC 58 12920255 12920336 TTGAAGGGAGATCCTTGCA 58 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 2 3 3 81 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894758 AATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 CG8907 FBgn0038466 FBtr0083372 1 1 1 83 3R 12835496 12835514 CTGGGCAATACCGAAATGC 59 12835615 12835697 CTTGCTTAGCGTCTTTAGATCC 59 NA Drosophila melanogaster 61 CG10345 FBgn0027562 FBtr0083360 3 1 1 84 3R 12423774 12423792 AACTCTTCGTGCTACTGCA 59 12423644 12423732 CTAAAGGAATGTTGTAGTAACAGGG 59 NA Drosophila melanogaster 61 CG42232 FBgn0250754 FBtr0290134 2 1 1 82 3R 12292239 12292258 CAATAGGGAACTTCAGGTGG 58 12292099 12292197 ATTTGCTATCATCTTCGGAACC 59 NA Drosophila melanogaster 61 CG34276 FBgn0085305 FBtr0112471 1 1 1 80 3R 11752013 11752104 AGAGTTATTCGATCAAACGCAG 59 11752145 11752163 TGTAGAACCAATTGCGCAG 58 NA Drosophila melanogaster 61 CG31461 FBgn0051461 FBtr0083166 1 1 1 63 3R 11546565 11546583 AAACAGAAGCCTGAAGTCC 57 11546607 11546628 CGTACACGAATAATTTCGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5038 FBgn0038324 FBtr0083089 2 1 1 60 3R 11179036 11179055 GAGTTCTCTATCATCGCTGG 57 11179078 11179096 ATTGCAGTCCGATAAGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 3 3 3 84 3R 10970037 10970055 GAGTTCCAGAACTTGCACG 59 10969532 10969990 AATCAAAGTCAATGTGGCCG 59 NA Drosophila melanogaster 61 CG8538 FBgn0038223 FBtr0273391 2 1 1 81 3R 10150531 10150549 ATTACCAATGGAGCAGCTC 57 10150410 10150487 TCGCCGAAGAGTATATTCCT 58 NA Drosophila melanogaster 61 CG14357 FBgn0038204 FBtr0301280 1 1 1 83 3R 9937617 9937635 ACGGAACCCTGATCAACTG 59 9937496 9937573 TCATTTCATTGGATTCCACGTG 59 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 3 3 3 86 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610097 9610116 CCTTGGATCATCGATCTGGA 59 NA Drosophila melanogaster 61 Task6 FBgn0038165 FBtr0301654 1 1 1 80 3R 9496547 9496642 TTTAACCACTATAGGCTTTGGC 58 9496488 9496506 AACATCACGTATTCGGGCT 59 NA Drosophila melanogaster 61 CG6359 FBgn0038065 FBtr0082641 1 1 1 130 3R 8454698 8454954 GATAGCAAGATTGTGGTGCC 59 8455047 8455065 TTGATGAAGGCCTCCAGTC 59 NA Drosophila melanogaster 61 trus FBgn0038055 FBtr0082634 1 1 1 131 3R 8283607 8283684 CTGTTGAGATATTCGCGGG 58 8283779 8283797 CAGCTTGGGAATCAGTGTG 58 NA Drosophila melanogaster 61 CG3916 FBgn0038003 FBtr0082560 1 1 1 76 3R 8055761 8055779 TGACTCGGAACGAGATCTG 58 8055879 8055897 AATCAAGGGTCCACCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 3 3 3 102 3R 7936145 7936163 TTAGCGATAGTGACGAGCG 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089918 2 1 3 84 3R 7643773 7643791 GTTGTGAAGCTTCGTGGTC 59 7642459 7643730 CTGCGGAATATCTCAATATACCAG 59 NA Drosophila melanogaster 61 CG14717 FBgn0037938 FBtr0082425 1 1 1 60 3R 7522741 7522760 CAATGATGACACTGGCACTC 59 7522783 7522801 ATGTCCACCAGTATGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 KP78b FBgn0026063 FBtr0301427 1 1 2 82 3R 7176867 7178735 CAAGGCAGCTGTTACTCCT 59 7176803 7176821 TGTTCTTGTTTGCGACTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 3 2 2 61 3R 7068727 7069513 ATGCTTGTGGGTATTACCG 57 7068684 7068702 TTCCGGTACTTGTACGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4757 FBgn0027584 FBtr0082339 2 1 1 81 3R 6987958 6988046 CGCTTTCTTTGATCTGCGA 58 6988091 6988109 GAGCAACGCAATAGAAGCA 58 NA Drosophila melanogaster 61 Ugt86Dd FBgn0040256 FBtr0113321 1 1 1 80 3R 6953836 6953855 TCAAGAACAAGGAGACACCA 58 6953714 6953795 GCAAACTCATCATCTCGTCTG 59 NA Drosophila melanogaster 61 CG6345 FBgn0037816 FBtr0082258 2 1 1 60 3R 6240799 6240818 GTCAACTCGTACAGAGACAG 57 6240758 6240777 CTGGAGTTGCTTTCAGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 2 2 3 83 3R 6049760 6049887 TGGAGCACTTTATAGAGGCA 58 6049696 6049714 CGAATTCCGGGTAATGCAG 59 NA Drosophila melanogaster 61 CG6241 FBgn0037792 FBtr0082185 1 1 1 80 3R 5969240 5969259 CAAGAAGAGCACTCTAACGG 58 5968646 5969199 TCTAGATTGCGCTTAGTTCTG 58 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215 2 1 2 80 3R 5826083 5826311 GATTATACTTTAATGGGTAGGCACC 59 5826027 5826045 CATCCAATGAAGCACGACG 59 NA InUTR Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 2 3 4 219 3R 5521238 5521319 CAAATCGGAGGCTTCTGTG 58 5521037 5521057 ACGGTAGTTTGTGATTAGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082069 3 1 2 66 3R 5386319 5386646 CAACAGATCGAACTCAGCC 58 5386676 5386694 CAGTCTGTCGAATGGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 rump FBgn0260010 FBtr0082123 1 1 1 84 3R 5333095 5334020 TTGCTAATCTGGACTACAAGGT 59 5333032 5333050 GAAAGGTCTACGCTCTGCA 59 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 1 5 5 229 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847653 4847671 GATGGGATTCTCGTAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 2 2 2 125 3R 4576580 4576598 ATCATTCTGGGTAGTGCCG 59 4576407 4576425 GATCATGAGCGTGAAGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8159 FBgn0037619 FBtr0301194 1 1 1 91 3R 4553686 4553764 CTGTTCAGATGTGAGCTGTG 59 4553816 4553836 TCCAAGTTGTGCTTATGAGTG 58 NA Drosophila melanogaster 61 CG8112 FBgn0037612 FBtr0081904 3 1 1 150 3R 4539480 4539873 CTGAAACCGCACAGTTCTC 59 4539986 4540005 TCTCGAGCAACAGGATACAC 59 NA Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 3 2 2 77 3R 4171064 4171083 GATTCCTGTTCTTAGGGCGA 59 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF4AIII FBgn0037573 FBtr0081834 1 1 1 82 3R 4139852 4139931 CATCTTGGTCAAGCGTGAC 59 4139977 4139995 CGAATTTCCATTCCTCGCG 59 NA Drosophila melanogaster 61 CG9626 FBgn0037565 FBtr0081864 2 1 1 80 3R 4123026 4123105 GAGAAAGAGAAATTGTCCCGC 59 4122966 4122984 TCCATCCGAAGTCTTGACC 59 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 1 1 2 104 3R 3826728 3826817 AACAATTTGGTCCGTGCTG 59 3826642 3826660 TTGTACCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 alpha-Est8 FBgn0015576 FBtr0081553 3 1 1 102 3R 3335991 3336255 TACAGCGATCTCTTCTCGT 57 3335907 3335925 ATCGGTACAGGAATGTTGG 57 NA Drosophila melanogaster 61 CG10068 FBgn0037473 FBtr0081611 2 1 1 105 3R 2953333 2953352 GTACTTGACCTTGATGAGGC 58 2953147 2953165 TGTTCTTGATGCGTTTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904,FBtr0081633 2 3 3 60 3R 2888075 2888093 TACCCTGATGCCTGTTTCC 59 2888115 2888135 CTATGTGATACATCCGGAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42537 FBgn0260645 FBtr0301001 3 1 1 111 3R 2203556 2203574 GGTTCTAGCTTGCGTTGTG 59 2203709 2203728 CCCAAATCCTTCGTTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 2 1 1 179 3R 2125040 2125058 TTCAAGACAACCAGGTCGA 58 2125201 2125685 GATCCCTCTGGAAGGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604 1 1 2 138 3R 2114161 2114179 GAGAAGCGTGATTAGCGAC 58 2114919 2114937 TTGAAAGCGACCTTGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2051 FBgn0037376 FBtr0078670 3 1 1 81 3R 1613835 1613949 GGTGTTACTTCTTGAGCTACG 58 1613774 1613793 TATACGGTGGTGTAACCAGC 59 NA Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 3 2 2 254 3R 1227160 1227242 GTACTGGACTATGTGCACTG 58 1226925 1226943 GAACTTCTTCACCACGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 2 2 2 253 3R 1227159 1227241 TACTGGACTATGTGCACTGC 59 1226925 1226943 GAACTTCTTCACCACGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2022 FBgn0037292 FBtr0301312 2 1 1 81 3R 814174 814271 GAAGTGCCTTAGGTTCAGC 58 814111 814129 CATAACGCTGGCCAATCTG 59 NA Drosophila melanogaster 61 CG9855 FBgn0037242 FBtr0078950 2 1 1 122 3R 222518 222594 TTTATCCGAACCTCAGCCAG 59 222415 222433 ATATGGTGGGCAGCAAGAG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 3 3 3 147 3R 95683 95701 ACAGTAACGGCATGACTCC 59 95495 95573 CTAGCGTTCATAACCACTGC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-920 FBgn0083015 FBtr0113610 1 1 1 80 3L 11816116 11816136 CCATGTCCATATCAGTTTGGA 57 11816177 11816196 CAGCCCACATATTAGTTGCT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32350 FBgn0052350 FBtr0070046 1 1 1 60 3L 23143233 23143254 TATTGCTCTTTGTTCCCTTACC 58 23143194 23143213 ATTGATATCCGGTGTGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11133 FBgn0037205 FBtr0078559 3 1 1 60 3L 22895909 22895929 CGCTGATGTCCAAATTAAGAG 57 22895948 22895969 AGTATATCGCCGAATACAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33766 FBgn0053766 FBtr0091767 1 1 1 159 3L 22638775 22638866 ATCGTGCCAATACCTACGA 58 22638989 22639007 TATCCATTGTGACACCCGG 59 NA Drosophila melanogaster 61 CG32440 FBgn0052440 FBtr0078345 1 1 1 98 3L 21353541 21353559 GAGTGACTTCGCTCTGGAG 59 21353621 21354057 TGATAGACGTTGGTGTCCG 59 NA Drosophila melanogaster 61 Ilk FBgn0028427 FBtr0078305 3 1 1 115 3L 21210242 21210674 AACAATTTGGGAGACGACC 58 21210753 21210771 ATATTGGTGGCGTTCACAC 58 NA Drosophila melanogaster 61 asparagine-synthetase FBgn0041607 FBtr0089463 1 1 1 60 3L 21166836 21166854 GGATACCTGCTCCAAAGTG 57 21166878 21166896 ACCAACTTTACCGAAACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fng FBgn0011591 FBtr0078267 1 1 1 80 3L 20936713 20936732 ACGAAGAACTATCACGACAC 57 20929803 20936670 GAAGAACCAGGTCTGATCG 57 NA Drosophila melanogaster 61 CG11458 FBgn0040637 FBtr0078265 1 1 1 96 3L 20898956 20898974 TCTACTTGCCGTTCTCCTC 58 20899034 20899052 ATTCTTCTGCCAACCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5847 FBgn0036985 FBtr0078191 1 1 1 95 3L 20410602 20410620 TAGTGGCATGATGGTCGAG 59 20410678 20410757 TTCACGTAGTTGCACTTTGG 59 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074855 2 1 3 116 3L 20212750 20213204 GATGGGAGCAATCAATATGAGG 59 20212655 20212673 ATGTATCCATAGCCCGACC 58 NA InUTR Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 1 6 6 90 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853562 19853580 CATCCTTCCTCTTGGGCTC 59 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 2 3 3 60 3L 19748407 19748428 ATAAAGGGTTATTCTGGCAACG 59 19748307 19748389 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074944 2 1 3 199 3L 19594912 19594930 GACAGCGTTGATGGAATCG 59 19595158 19595771 TCTGGTATGGCGAAACTCG 59 NA Drosophila melanogaster 61 Cpr76Bc FBgn0036880 FBtr0113180 1 1 1 114 3L 19516470 19519133 CGCATTATGAGCATCAGGG 58 19519211 19519229 CTGTAGTGACCCTTGACCC 59 NA Drosophila melanogaster 61 Cpr76Ba FBgn0036878 FBtr0074977 3 1 1 60 3L 19511349 19511367 CCAATTGAGCATCCTCTGC 59 19511307 19511325 ATGAGGGATGTAGCTAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34255 FBgn0085284 FBtr0112449 2 1 1 106 3L 18863645 18863717 CTTCAGCGGAAACTAATCGA 58 18863786 18863804 TGATCAGTGGTTACGAGCT 58 NA Drosophila melanogaster 61 star1 FBgn0036790 FBtr0089578 3 1 1 80 3L 18567767 18567785 CAAACCAGGAACGAAGTCC 58 18567824 18567911 TATACACTTATCACCGTCAGTACC 59 NA Drosophila melanogaster 61 CG6034 FBgn0036750 FBtr0075194 2 1 1 60 3L 17739538 17739558 GAATTGACGAACGCATTTGAG 58 17739498 17739516 TAAAGGCATCACCTACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12229 FBgn0036723 FBtr0075226 3 1 1 60 3L 17429042 17429061 ATGGAACCTACACCTTTCAC 57 17429001 17429019 ATGGCTTTCAGTTCATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7730 FBgn0036689 FBtr0089584 2 1 1 80 3L 17021744 17021762 AAATGGTGCCTCAATGGTC 58 17021805 17021882 TGGTCATCTCCATGTTTCGA 59 NA Drosophila melanogaster 61 Smn FBgn0036641 FBtr0075395 1 1 1 60 3L 16574062 16574082 AGTATCCTTCAAAGTAGGCGA 58 16574022 16574040 CTCGTAGTCCACACCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4573 FBgn0036629 FBtr0075411 3 1 1 80 3L 16409011 16409029 GGGAATGAGAGTCGTACGA 58 16408889 16408968 ATCTAAGTTGGAGTGTTGCG 58 NA Drosophila melanogaster 61 SsRbeta FBgn0011016 FBtr0075453 1 1 1 73 3L 16123356 16123374 CTACAAGGCTGTCGAGGAG 59 16123633 16123651 TGACAATTCCACCCTCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13075 FBgn0036563 FBtr0301031 3 1 1 142 3L 16077651 16077725 CTCCGAATTTCTTGGATTGGA 58 16077828 16077847 TAGGATTGGTACTAGGCTCG 58 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0301473,FBtr0112851,FBtr0301472 1 5 7 80 3L 16063960 16063979 CACAGACGGTTATTCAGAGG 58 16064020 16064218 GATCCAGTTCATCCATATCGA 57 NA Drosophila melanogaster 61 CG13445 FBgn0036532 FBtr0075503 3 1 1 71 3L 15802623 15802704 TGTTCTTTGGTATCATCGCC 58 15802738 15802756 CATCATCACCCTTGTCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Best4 FBgn0036491 FBtr0113172 3 1 1 93 3L 15293124 15293235 GACTTCGAGCTCAACTGGA 59 15293291 15293310 CCTTAACAAGTTCCGGATGC 59 NA Drosophila melanogaster 61 CG3349 FBgn0036459 FBtr0075623 3 1 1 60 3L 14975281 14975299 AATCGCTTCGCTACAACAG 58 14975323 14975341 ATGTTCAGTATTCTCCGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7924 FBgn0036416 FBtr0075740 1 1 1 80 3L 14226599 14226617 CAATATCACTTGGCCGCAG 59 14226723 14226741 AATCCGACCGATTTCTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 ssp2 FBgn0036389 FBtr0075759 1 1 1 110 3L 13964106 13964124 TGCCAAGACCTAGTTTGGG 59 13964198 13964277 ATACAGCGGAGTCATCCTC 58 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 1 3 3 88 3L 12788111 12788129 TTACAAATCCGCCCATCGT 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG10657 FBgn0036289 FBtr0075975 1 1 1 80 3L 12485847 12485930 TCGATCCGTACAAGTTCAC 57 12485785 12485803 AATCCTCATCATCCAGCAG 57 NA Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 3 2 2 141 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458137 12458155 CGTTCTCGTATCTCCCAGG 59 NA Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 1 2 2 101 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458177 12458197 GCTTGTACTGTTCGATCTTGG 59 NA Drosophila melanogaster 61 CG9760 FBgn0036259 FBtr0273438 1 1 1 83 3L 12151410 12152258 TCTTCTTCACGGTAACCGAG 59 12151346 12151364 CTTTCTTTGGCGTGACCAC 59 NA Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 1 1 1 66 3L 12130191 12130278 ATTTGTATCCTTCTGAACGCC 58 12130306 12130324 GATCTACGGTCCAGGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0302137 1 1 3 61 3L 11815356 11815374 TTAGTTTACCAGCCCTGGA 57 11815181 11815337 CTATGATATCACCAATATTCTCGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14131 FBgn0036205 FBtr0076028 3 1 1 82 3L 11770594 11771324 TTCGAATCGCAGGTTAACG 58 11771370 11771388 CATGGGCTTTCGAATTCCT 58 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 1 3 3 86 3L 11171620 11171755 GCAGAGATATTCTCACGTGG 58 11171553 11171571 GGTTCGTGTTCTTGTAGCG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 2 4 5 135 3L 10567562 10567580 ATCATCTTCAACGAACGCG 59 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 2 3 3 87 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188019 10188039 GATGTCATCGCCGATAATGTC 59 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076351 1 1 5 297 3L 9966117 9966138 CAGACGATCACGTTATAATGGA 58 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Cdk8 FBgn0015618 FBtr0076369 3 1 1 117 3L 9831658 9831678 CAGATAGAGCGTACGAAAGTG 58 9831499 9831580 ATTCTTTGCCATCGCTTGTC 59 NA Drosophila melanogaster 61 CG33700 FBgn0053700 FBtr0301069 3 1 1 102 3L 9507484 9507568 TCCTGTCCATATGATCACGA 58 9507401 9507422 TCACTCTTATCATGTAATCGCC 58 NA Drosophila melanogaster 61 CG33702 FBgn0053702 FBtr0091690 2 1 1 93 3L 9506191 9506210 CAGACCAGAGCAATATCCGA 59 9506044 9506139 ATCCTTCTCTGTATATGGACACG 59 NA Drosophila melanogaster 61 CG32032 FBgn0043806 FBtr0076529 3 1 1 81 3L 9086823 9086903 CGGATCAGATCCGTTTGAG 58 9086945 9086966 CCATAGTTATTCTGGTTACGGT 57 NA Drosophila melanogaster 61 mRpL12 FBgn0011787 FBtr0076511 3 1 1 150 3L 8949907 8949928 GGCTGTTTATCGATAAACTGCT 59 8950095 8950113 CACTGTACATGCGATGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GNBP3 FBgn0040321 FBtr0076510 2 1 1 60 3L 8948731 8948753 CTACGAGTTTAATGTGTACGTGG 59 8948773 8948791 ATGACCATTGGCTAAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076564 2 1 4 75 3L 8937610 8937926 TAATTTCATTTGCGGTGGCC 59 8937554 8937572 TTGTTGATGCTGTTGCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156,FBtr0301158,FBtr0089561,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089568 3 7 13 86 3L 8620819 8627689 ATTGTGAATCAGCCCTACC 57 8627739 8627757 CAAGTAGGACTCTGTCGTG 57 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 2 2 2 70 3L 8177526 8177600 TAATGGGCATGCTCAAGGA 59 8177474 8177492 ATTCCTTCGGTACTTCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 1 2 2 106 3L 8172114 8172135 CTGACAGCCATTTACATTAGGA 58 8171966 8172048 TGTAGGTAAGTCTGGCTGTC 58 NA Drosophila melanogaster 61 RecQ4 FBgn0040290 FBtr0076729 2 1 1 80 3L 8164265 8164283 GCAGCTAAAGGCTATCGTG 58 8164142 8164223 ACGTTACTTGGCTCTATTTCC 58 NA Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 3 2 2 98 3L 8126880 8126957 TACCAGAGTCAATAGCAAACC 57 8126802 8126821 TTAAGCTCCAACAGATTGGC 58 NA Drosophila melanogaster 61 CG7927 FBgn0027549 FBtr0076684 1 1 1 130 3L 8105696 8105716 AAATGCTCAGCTACAAGAAGG 58 8105808 8106123 GCAAACCAGCTTCTTCTCC 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850,FBtr0301611 1 3 3 80 3L 7378361 7378441 CAGTTAACGAACAGGACCG 58 7378482 7378503 TATCATTTAGAGTGGGTACCCT 57 NA Drosophila melanogaster 61 G-ialpha65A FBgn0001104 FBtr0076934 1 1 1 80 3L 6966739 6966760 CAACAAGAAGGATCTGTTTGAG 57 6966624 6966699 GTGTTGGTTCCTGTGTACTC 58 NA Drosophila melanogaster 61 vvl FBgn0086680 FBtr0076944,FBtr0300260 3 2 2 83 3L 6784206 6784224 AAACCCATCATACGCACCA 59 6784271 6784289 AGAGATGCGACATCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vvl FBgn0086680 FBtr0300260 1 1 2 121 3L 6785085 6785103 ATCCGCATCACGATATGCA 59 6785188 6785284 CTGCTGGCTTAGATGATGC 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 6 6 92 3L 6584021 6584039 TGTGAATCCTCCCAAACGT 59 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 LanA FBgn0002526 FBtr0077014 2 1 1 80 3L 6204764 6204839 AGTTCACGATTACGACCGA 58 6204702 6204723 CATCATTGTACTGCTTCAAGGG 59 NA Drosophila melanogaster 61 Acp65Aa FBgn0020765 FBtr0077021 3 1 1 94 3L 6145673 6145775 TGAAATTGATGCTAGTCGTTGG 59 6145600 6145621 CGATTCGTACTCAAGAACTTCC 59 NA Drosophila melanogaster 61 Cpr65Aw FBgn0052404 FBtr0077023 2 1 1 82 3L 6135407 6135425 CAAATGCCACCGATACTGC 59 6135278 6135361 TGTCTCGAATGAGAAGGCA 58 NA Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299609,FBtr0299610 2 2 2 84 3L 6059930 6059948 GATACCCGAACAGCATTGG 58 6062556 6062574 GGTCATGGGTATGGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13287 FBgn0035643 FBtr0077027 3 1 1 60 3L 5876194 5876212 CCAAGAACCAATAGCGGTG 58 5876234 5876254 GGTAGACTATGGGATTTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 S6k FBgn0015806 FBtr0077114 2 1 1 81 3L 5798972 5798993 AGACAAATTCCAGTGGATTCAC 59 5793802 5798931 CAACGTAGGTGAAACCTTGG 59 NA Drosophila melanogaster 61 Sse FBgn0035627 FBtr0077125 1 1 1 80 3L 5653887 5653959 AGTCGATGAGCGTCTAGAC 58 5653825 5653843 CAATGCAGTGATTTGACGC 58 NA Drosophila melanogaster 61 sinu FBgn0010894 FBtr0077136 1 1 2 71 3L 5553867 5553885 ATCTCAGACGCGATTTGAG 57 5553750 5553768 TTTCCTTGGTGCAAGTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13720 FBgn0035555 FBtr0073327 2 1 1 60 3L 4499699 4499718 GCAACACAATATCTACCCGA 57 4499658 4499679 TGCAAATTGATGACCTCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13721 FBgn0035554 FBtr0073328 1 1 1 80 3L 4497269 4497422 CAGTTACTACGGAATTGGTTATCC 59 4497212 4497231 AAGTAGTGTCCATAGTGCCC 59 NA Drosophila melanogaster 61 CG11349 FBgn0035550 FBtr0073305 1 1 1 60 3L 4474961 4474979 CGACACTGACTATCGTGAG 57 4475001 4475021 AAACTCGAATGACTGTTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15020 FBgn0035543 FBtr0073298 3 1 1 80 3L 4424835 4424855 CAGGAGGAATACTGGGATCAG 59 4424893 4424978 CTCAGCTTCGATATGTTGAACTC 59 NA Drosophila melanogaster 61 CG11582 FBgn0035525 FBtr0300579 3 1 1 60 3L 4283367 4283386 GGAATTCGAAGGAATGCCAG 59 4283326 4283347 GTATCCATCGTTTGGAGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr64Aa FBgn0035510 FBtr0073254 2 1 1 87 3L 4208554 4208899 ATGTTCATGATGGCTCCAC 57 4208485 4208503 TCAATCAGTGAATAGGCGC 58 NA Nonspecific Drosophila melanogaster 61 CG10853 FBgn0035478 FBtr0073164 3 1 1 109 3L 3947989 3948065 GTCACAATAATCCCTGGGAG 57 3948135 3948155 TCCTTCTTTGGGATAAACAGG 57 NA Drosophila melanogaster 61 Scsalpha FBgn0004888 FBtr0073151 2 1 1 106 3L 3817713 3817793 TACAATTCGGGCATCAAGG 57 3817863 3817881 TTTCCTCCGGAAATGATGG 57 NA Drosophila melanogaster 61 CG2113 FBgn0035384 FBtr0072979 3 1 1 65 3L 2995253 2995329 GCTGAAAGTCAGGAATCCC 58 2995358 2995376 TTGTTGGTTGAAGAGCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1240 FBgn0035370 FBtr0072969 2 1 1 207 3L 2767028 2767046 CAACCCTATAGAGACGCCG 59 2767291 2767309 CTGAATTTCACGACGCAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 2 4 4 81 3L 1326067 1326085 CCTCGAGAACTACCAGAGC 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 CG9119 FBgn0035189 FBtr0072635 3 1 1 81 3L 1204276 1204564 TTGCAGAACGTTATACAGGGT 59 1204215 1204233 CCTTCAGATCCGGACAAGG 59 NA Drosophila melanogaster 61 CG9119 FBgn0035189 FBtr0072635 2 1 1 80 3L 1204276 1204564 TTGCAGAACGTTATACAGGGT 59 1204216 1204234 CTTCAGATCCGGACAAGGG 59 NA Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 3 2 2 187 3L 838617 839260 TCATCGAGCTCAACAAGCT 59 839411 839429 ATCATCCTTGTTTCCGCCT 59 NA Drosophila melanogaster 61 CG13895 FBgn0035158 FBtr0072605 2 1 1 107 3L 707611 707899 GTACTCTGACAATGATGACACC 58 707525 707543 ACAATGTCGTACTGTCGGA 58 NA Drosophila melanogaster 61 Ppm1 FBgn0035143 FBtr0072553 3 1 1 83 3L 581493 581566 AAGGACAAACAGTTCACAATGG 60 581610 581628 ATAGCTTGCATTGGCACAG 59 NA InUTR Drosophila melanogaster 61 DIP2 FBgn0024806 FBtr0072520 2 1 1 80 3L 257177 257196 ATTACGCAGAAAGGCTACGA 59 257043 257136 TTTCACTTTATCGCCTTCTGG 58 NA Drosophila melanogaster 61 CR14499 FBgn0034317 FBtr0086751 2 1 1 60 2R 14075375 14075393 AGAACTTCTTCGGATCGTC 57 14075414 14075435 TATTGCTAAAGCTCAGAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 2 2 2 92 2R 20828707 20828725 GAATTCCCTGGACAACCTG 58 20828566 20828651 CATGGAACGGTTCCTTCTC 58 NA Drosophila melanogaster 61 key FBgn0041205 FBtr0072428 2 1 1 80 2R 20673811 20673830 AGCGTATCTGAGAAACAGTC 57 20673607 20673770 CTCAAACGAGTGATTTAGCTG 57 NA Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130,FBtr0072372 2 2 2 61 2R 20650979 20650997 TACCACGGGTCCAATATCC 58 20651022 20651040 AAACTAGCTCTCCGGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30161 FBgn0050161 FBtr0072333 1 1 1 60 2R 20551294 20551314 CAGATGGGACACTTACTAACG 58 20551254 20551272 AAGGCATGCGGTATAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13578 FBgn0035000 FBtr0072289 1 1 1 226 2R 20265760 20265833 CAAGAAGGAGTACCCTGCC 59 20266020 20266041 GTATGATCTCCAGTTTCTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 mr FBgn0002791 FBtr0072156 3 1 1 83 2R 19860958 19861051 ACTGGAAACTTGGCTATCG 57 19861096 19861116 TCGCTTATGCTATCCTTAGAC 57 NA Drosophila melanogaster 61 CG5543 FBgn0034908 FBtr0072124 3 1 1 60 2R 19697893 19697911 TGCAACTTTAACAGGGACG 58 19697935 19697953 TCTGAATGGAACCATCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Klp59C FBgn0034824 FBtr0071975 1 1 1 60 2R 19012205 19012224 GTGTTCCAAATCGTGCTGAG 59 19012164 19012182 TAAGCGAGAATTTCCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13531 FBgn0034786 FBtr0071910 2 1 1 80 2R 18735869 18735958 CATTTAAGCGTACCTCAAGCT 58 18735809 18735827 TTGAGACAAGATGGCTTCG 57 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301377 2 2 8 88 2R 18605688 18605706 ACCATCAAGTACGGAGGAC 58 18605547 18605636 TAAACGCGGACCTTACTGG 59 NA Drosophila melanogaster 61 Rtf1 FBgn0034722 FBtr0071820 1 1 1 80 2R 18265088 18265163 CCGCTACCAGTCAATACGA 59 18265206 18265225 TAGATTCAGCGAACGTTTGG 58 NA Drosophila melanogaster 61 CG34208 FBgn0085237 FBtr0112401 1 1 1 60 2R 18220669 18220688 AGTTTGTTCCTGGTATTCGG 57 18220711 18220729 CTAGGGCTAAAGTGCCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30278 FBgn0050278 FBtr0071780 1 1 1 80 2R 18105488 18105558 GCATCTGAATGAGTGGACC 58 18105426 18105446 ACTATGGTGTTATTGTCCAGG 57 NA Drosophila melanogaster 61 Tbp FBgn0003687 FBtr0071679 2 1 1 175 2R 17574322 17574341 ACAATCCTAAGCGATTTGCG 59 17574102 17574184 GAACTTTGCAGGGAAACCG 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 1 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071691,FBtr0071690 2 2 2 114 2R 17494113 17494194 GTTACTACATGCTGCAGGG 58 17494017 17494035 AATCCCTTGTTCGAGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30287 FBgn0050287 FBtr0071695 2 1 1 148 2R 17425352 17425370 AGCCAGCGGACTTATTCTC 59 17425108 17425179 CAAACGCACTGTCAATTGAC 58 NA Drosophila melanogaster 61 CG30288 FBgn0050288 FBtr0113367 1 1 1 106 2R 17407683 17407703 GTCAGAGTAATGATTTCGGGA 57 17407478 17407555 CGCACATTCATATACATTGGG 57 NA Drosophila melanogaster 61 tud FBgn0003891 FBtr0071582 1 1 1 80 2R 17075372 17075390 TTGTAAACGGAGCATCCCT 59 17075434 17075544 GGTTAACGCGAATCTCAGG 58 NA Drosophila melanogaster 61 CG30291 FBgn0050291 FBtr0071549 3 1 1 81 2R 16896814 16896832 ACAGGAAGATTAGCAACGC 58 16896700 16896770 TAGTTGATATTTGTCCGGGC 57 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397,FBtr0273396 2 2 2 80 2R 16875169 16875248 TCGCACCATAATGAAAGGC 58 16875107 16875126 TCGAGATTGTTGGCATACTG 58 NA Drosophila melanogaster 61 CG15651 FBgn0034567 FBtr0071553 1 1 1 82 2R 16873022 16873040 AGATGAACCTGGATTTGCC 57 16872899 16872977 CTTCTGCAGGAACAAATCAC 57 NA Drosophila melanogaster 61 CG13871 FBgn0034502 FBtr0086282 2 1 1 60 2R 16205282 16205300 GATGATCCCTTCGAGTCCC 59 16205321 16205342 ACTTACGCTCATTCAAATGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr56F FBgn0034499 FBtr0086301 3 1 1 62 2R 16176557 16176575 GATGGTGATCTTGCTGTGG 58 16176513 16176531 AACAATCTGTTTGCGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp56d FBgn0034470 FBtr0086477 3 1 1 60 2R 15591235 15591254 TGAAGTTCCTGATTGTCCTC 57 15591124 15591212 GATAGTTGCAGCTCAGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15120 FBgn0034454 FBtr0086463 1 1 1 115 2R 15385741 15385759 TAATGATCCGGGACGAGGA 59 15385838 15387136 TTTCAATGTCCACCGTCCA 59 NA Drosophila melanogaster 61 CG11242 FBgn0034451 FBtr0086502 1 1 1 80 2R 15374148 15374168 CCAACTCTCACAATGATGCAG 59 15374036 15374107 CAAGTTTGGTCTTGAGCTGG 59 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 2 2 2 80 2R 15266798 15266816 AAGTACGCGCATAGATGAG 57 15266859 15266941 GCAGCAATGTTATCTTTGGC 58 NA Drosophila melanogaster 61 CG10051 FBgn0034437 FBtr0086521 2 1 1 80 2R 15254197 15254279 GAATGGAAAGACTCTGCTCG 58 15254321 15254340 TTTAGACAGCTGGGTAAGGT 58 NA Drosophila melanogaster 61 CG11906 FBgn0034425 FBtr0086563 2 1 1 88 2R 15169935 15169953 CAACAGCGCTGGTAATCTC 59 15169804 15169887 GGTAAAGATCATACTCCTTGTCG 58 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 2 5 5 96 2R 15023508 15023528 CTACAACTGCAAGGTGTATGG 59 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 icln FBgn0029079 FBtr0086832 3 1 1 61 2R 13478634 13478652 GGCACAGTTTACATTGCCC 59 13478763 13478781 ATACCCTCCGCCAATTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0113090 2 1 2 132 2R 13435920 13435938 CTGCCGCCTACAAATTGTG 59 13436034 13436403 GTTCTTTACGCAGCTGCTC 59 NA InUTR Drosophila melanogaster 61 Lhr FBgn0034217 FBtr0086917 3 1 1 60 2R 13319245 13319263 CTACTCGAAAGCTGGGTCC 59 13319285 13319305 AGAAATTCGTCGTATTCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 2 1 1 85 2R 13306732 13306916 GGTCTGGATGAGTCTATGAAGG 59 13306668 13306686 TATGGCCGTATGTTGAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10953 FBgn0034204 FBtr0086997 2 1 1 89 2R 13053878 13053969 GCTGTCATCATGAAATTCCTG 57 13053809 13053827 AGGAGAGTAGTCGTAACCC 57 NA InUTR Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 1 1 1 75 2R 12979978 12980054 GCAAGTTCTCTACTCCAGGG 59 12980092 12980110 GACATAATCCGGGCAACTG 58 NA DesignNoJunction Drosophila melanogaster 61 NiPp1 FBgn0026402 FBtr0087058 2 1 1 89 2R 12892050 12892068 AACATCATGGAAGACCTGC 57 12891918 12891998 TGTGAGATTATCAAGCTCCG 57 NA Drosophila melanogaster 61 CG6435 FBgn0034165 FBtr0087045 3 1 1 126 2R 12761376 12761749 GTTCCAGCTATGAGGTGCA 59 12761837 12761857 GTGATTCGGAATATACCGCAG 59 NA Drosophila melanogaster 61 Chit FBgn0013763 FBtr0087111 3 1 1 80 2R 12580420 12580501 ACTCATCCCTGTTCTACGAC 59 12580540 12580562 GTGTAAAGAAATCGAAGGTACCC 59 NA Drosophila melanogaster 61 CG5089 FBgn0034144 FBtr0087107 1 1 1 60 2R 12487014 12487033 CTAATACCTCCGGCATTACC 57 12487053 12487074 TCCTCCTCAATATACGTTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DAT FBgn0034136 FBtr0087125 3 1 1 80 2R 12448478 12448559 AATTGTAGACCGTTTGAGAGC 58 12448418 12448438 ATTTCCCATGGCATACAAGTC 58 NA Drosophila melanogaster 61 CheB53b FBgn0261293 FBtr0091479 1 1 1 80 2R 12355963 12356039 CGAGTTGAACTACAAGGAAGC 59 12356079 12356099 GTCCTTGACCAACATGTTGAG 59 NA Drosophila melanogaster 61 CG3687 FBgn0034097 FBtr0087132 1 1 1 108 2R 12124512 12124530 ACATTCTGGAGATGCTGGA 58 12124657 12124677 GTAATGAAGCGTATGAATCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8399 FBgn0034067 FBtr0087207 3 1 1 92 2R 11910207 11910225 GACGAAGAGCTGTACCTCC 59 11910281 11910358 TAAGCAGCATTGGTTCCCT 59 NA Drosophila melanogaster 61 Cdk5 FBgn0013762 FBtr0087350 3 1 1 112 2R 11458218 11458396 CTGCCACAGCCATAATGTC 59 11458124 11458142 GAATGCCAAAGGCTCTAGC 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833,FBtr0113485 1 6 6 80 2R 11158315 11158524 GGCCATTACGCATAAATTCTC 57 11158255 11158276 ATGACAAAGAGTATAATGGCGG 58 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 2 3 4 80 2R 10641389 10641505 TGATCACGAGAAAGCAATGAG 58 10641329 10641347 CGATTGTGTTGGATCTCGT 58 NA Drosophila melanogaster 61 mspo FBgn0020269 FBtr0087477 1 1 1 81 2R 10560571 10567455 AATCCCATCTATGGCAGCA 58 10560508 10560526 CATGCTTGTCGTTCTTCGG 59 NA Drosophila melanogaster 61 CG30076 FBgn0050076 FBtr0087513 3 1 1 60 2R 10432844 10432864 AGTACTTTAAGAAGCGTCCAC 58 10432804 10432824 ATAATCTTGCCAGAGATGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 2 2 2 80 2R 10151027 10151105 CTATACTCTGGCCCACTCC 58 10150965 10150984 TTGTTAATGGTGCGATTGCT 58 NA Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 2 1 1 87 2R 9731540 9731558 TCCTGTTCGAACGGATGTC 59 9731400 9731490 TACATGAATGTCCAGAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 2 2 2 95 2R 9241392 9241560 GCAGTTCCACGATAACTGG 58 9241315 9241333 CACCAGTAAAGCAACAGCA 58 NA Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 2 2 2 81 2R 9037179 9037266 AGTTCGCAGAATTACAATCACG 59 9037119 9037140 GGAGAGGTGTTTGTTCAATGTC 59 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 2 2 2 81 2R 9022187 9022269 GCACCTATATGGATAAATTCTGCC 59 9022308 9022327 AGGAGCATGTTCTGGAACTC 59 NA Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 3 3 3 103 2R 8822745 8822765 ACAATAGACAGTATCCGGGTG 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 CG30050 FBgn0050050 FBtr0289993 1 1 1 80 2R 8296475 8296494 CCAATAATCTGGTGGTTCGG 58 8296535 8296617 GTAGCCCATGTTTGGAATCAG 59 NA Drosophila melanogaster 61 CG8501 FBgn0033724 FBtr0087915 2 1 1 60 2R 8271782 8271802 ATTCAGGAAGTCATTCGACAC 58 8271824 8271842 AGGGCCAATAAGATCAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42531 FBgn0260436 FBtr0300859 2 1 1 83 2R 7751947 7752033 CGGAGCTTTAATCAGATCAACTG 59 7752071 7752094 CAGTACACAAACAGGATCATACAG 59 NA Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088151 2 1 2 141 2R 7265747 7266484 AATGTGCTGTTTGCGATCTC 59 7265625 7265643 ATATGATCAGGCCCGTGAC 59 NA Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088128 1 1 2 117 2R 7254591 7256056 ATAGGTCTTTCAGTGGAGGC 59 7256134 7256154 CCCAGTACTGGTACTTCTTGG 59 NA Drosophila melanogaster 61 CG9062 FBgn0033607 FBtr0088181 1 1 1 80 2R 7170940 7170960 TACATACAATCGATGGAGCAC 58 7170818 7170898 GGCGCTAATAAGGTTCCTG 58 NA Drosophila melanogaster 61 Cpr47Ea FBgn0033597 FBtr0088190 1 1 1 131 2R 7140325 7140343 CAGTTTCATTCAGGCGCAG 59 7139941 7140234 GTCTCGTAGTTGTACTGATAGGA 59 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 2 2 3 80 2R 6773024 6773102 AGTTCCTCATCTATGAGAACGA 58 6773143 6773161 GATCCCGGGAAACTTTCAG 58 NA Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675,FBtr0089674 1 2 2 60 2R 5974340 5974360 TCTAACGCGTACAACTTTACC 58 5974300 5974318 TCATCAGAGATCCCACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mmp2 FBgn0033438 FBtr0088501 2 1 1 105 2R 5503003 5554882 ATCTTACGTGGAGCATGGT 58 5502916 5502934 AATGTCAGCTTCGAGTGGT 59 NA Drosophila melanogaster 61 Wnt2 FBgn0004360 FBtr0088512 1 1 1 209 2R 5389084 5389486 ATACCCACAGCTTCTCGTG 59 5389659 5389677 ATACCGCATCCCAAAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Myd88 FBgn0033402 FBtr0088598 3 1 1 80 2R 5192786 5192805 ACAGAGGAGTTTCTTCGGAG 59 5192652 5192745 GCGAGTGTGATTCTCAATCTG 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638,FBtr0088637,FBtr0088639 2 4 4 80 2R 4755616 4755695 CCAGTTTATTACAGCCTTGGA 58 4755737 4755755 ATCTCGTTGAGGTTGACCT 58 NA Drosophila melanogaster 61 CG30357 FBgn0050357 FBtr0088721 1 1 1 60 2R 4608360 4608379 AGTATTGCCTCGATCATGGA 58 4608319 4608337 TTCGCCTCAAAGTACAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14743 FBgn0033326 FBtr0088722 1 1 1 80 2R 4598789 4598966 CTAGTTGAGACTATGCTGGTG 58 4598729 4598748 CAGTAGTGACCATATTGCCA 57 NA Drosophila melanogaster 61 CG14744 FBgn0033324 FBtr0113056 1 1 1 87 2R 4596071 4596145 GGGAGAGGGTATAGTGCTC 58 4596002 4596020 TCTGATGTAGTACCGCAGC 59 NA Drosophila melanogaster 61 Cyp4ad1 FBgn0033292 FBtr0088760 1 1 1 81 2R 4328006 4328085 ACTGAATCGGATTATCTCGCA 59 4327945 4327963 GGGTTTGTTGATTGGCTGG 59 NA Drosophila melanogaster 61 CG12126 FBgn0033280 FBtr0088801 2 1 1 60 2R 4150559 4150579 CCTCGTTTACTTCAGCAAAGG 59 4150519 4150541 GTTGGATGAGACTTCTTGATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876,FBtr0088877 3 2 2 60 2R 3848532 3848552 TAAGGAACGCATAATGGACGA 59 3848492 3848512 CATGGGAAACTGGTATATGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8728 FBgn0033235 FBtr0088882 1 1 1 80 2R 3825205 3825279 CGGATTAGTAAAGGAACAATGC 57 3825146 3825165 AATCCGAGAATTACATGGGC 58 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 2 4 4 85 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806336 3806416 TCGATAAGAACCTCTTCGCA 59 NA Drosophila melanogaster 61 CG30493 FBgn0050493 FBtr0088925 2 1 1 84 2R 3590319 3590340 AATGATGCTATCCCAAACAGAG 58 3590385 3590460 GAGAATATTACGCGCCGTG 59 NA Drosophila melanogaster 61 Vps13 FBgn0033194 FBtr0088910 3 1 1 80 2R 3461881 3461899 AAGCACTCTATTCGCTCCT 58 3461942 3462020 GTTTGGAACTTCGTGACTGG 59 NA Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088906 2 1 2 114 2R 3422591 3422847 AATTAAATCTCATCCCGGTGG 58 3422923 3422941 CTTCTTCATCATGTCGCGG 59 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088973 3 1 3 100 2R 3330878 3330956 CATGTAAGCGCCTCAAGTG 59 3331018 3331038 GCCATAGTAGATACGACCCAG 59 NA InUTR Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 1 2 2 81 2R 2650391 2650411 GTGAACTTCGAGAAGATGCAC 59 2650271 2650348 GCTCTAGTCCCAGACTCCT 59 NA Drosophila melanogaster 61 gp210 FBgn0033039 FBtr0086044 3 1 1 80 2R 1659486 1659583 ACATTTGGTGACTCCTTTAACG 59 1659624 1659642 ATACGACTCCGACAAAGCA 59 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 1 3 3 153 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040327 GCAGAAATATCTGATCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 snRNA:U2:38ABa FBgn0003922 FBtr0081313 1 1 1 60 2L 19815721 19815740 TAGTTCCTCCATTGGAGGAC 58 19815680 19815698 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0302386,FBtr0111259 1 2 4 86 2L 22432993 22433013 TCTAAACTCGGATCAACTGGA 58 22433114 22433132 TACCGAAATCGGTCAACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34137 FBgn0083973 FBtr0110947 3 1 1 60 2L 22151845 22151867 CACAGTACCTAAACCTCAATTCG 59 22151885 22151905 TTTAATGTAACGGTGGTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33856 FBgn0053856 FBtr0091860 1 1 1 60 2L 21523776 21523798 CTAGAATTATTCCGCGTCATCTG 59 21523817 21523836 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp38D FBgn0261058 FBtr0301938 1 1 1 102 2L 20640974 20641058 TTGGCTACATACTTGGCAC 57 20641124 20641142 GGATTGCTAAGAGCTTGCA 58 NA Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 1 2 2 262 2L 19767343 19767750 TCTATCACAAGCCAGCCTG 59 19767099 19767117 TCTGGAACCAGGTCTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 msb1l FBgn0027949 FBtr0081258 2 1 1 171 2L 19577966 19578050 CCTTTAACCTTCTTGCAGGC 59 19578184 19578202 GAACCTCATCGAGGACCAG 59 NA Drosophila melanogaster 61 CG17564 FBgn0032768 FBtr0081225 2 1 1 105 2L 19299686 19299704 GAAGCTCGATGTTCTGGGA 59 19299427 19299617 CGAGTTCGGTGGAATTACG 58 NA Drosophila melanogaster 61 amd FBgn0000075 FBtr0081154 1 1 2 269 2L 19112307 19112803 TTCAGCTGGATCTGCAGTC 59 19113036 19113054 GTTACTCTGGTCCGAGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 1 3 3 105 2L 18963249 18963267 AATCCGTTCGAAGAGGAGC 59 18963107 18963181 CTGTGATGCTTCCTTGACTG 59 NA Drosophila melanogaster 61 CG10376 FBgn0032702 FBtr0081128 1 1 1 60 2L 18701760 18701779 GAAACCGTTTACGATTCCCT 58 18701719 18701737 GCAGTTTGGGAATGTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10211 FBgn0032685 FBtr0081069 2 1 1 84 2L 18528765 18528847 CTGGAGGACAATTATCTGAATTCC 59 18528889 18528908 CTTCAGGGTTTACTTGCCAG 58 NA Drosophila melanogaster 61 CG42635 FBgn0261358 FBtr0302276 1 1 1 60 2L 18008473 18008493 CTGTTTATGGTAGTTTCCCGT 58 18008515 18008533 GGGTTTGGTTTAACACCCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6870 FBgn0032652 FBtr0080989 2 1 1 60 2L 17592076 17592094 GAACCTCTTGCAATCGCTG 59 17592034 17592054 CACCTGATTACTGGACTTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 1 2 2 96 2L 17479234 17479252 TTGAGTATGCACAGGGAGC 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 2 1 1 61 2L 17012697 17012716 CTTATGTTGCCGTGGAAAGG 59 17012594 17012674 TAGTCCACATTGCGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 2 2 2 134 2L 16843617 16843635 TACACCGATCGGGTAATGC 59 16843383 16843522 CATAATGGCATACTGAATGCCA 59 NA Drosophila melanogaster 61 Cyt-c-p FBgn0000409 FBtr0080889 3 1 1 92 2L 16719969 16722019 TGTTCAATTCGAGTCCGTG 58 16722074 16722093 AACAGCTTCTTTCCCTTCTC 57 NA InUTR Drosophila melanogaster 61 CG31807 FBgn0051807 FBtr0080944 1 1 1 60 2L 16682285 16682303 CAGCTCTTAGCGGAAAGGA 59 16682243 16682262 TATTTAGCTTCGCCAGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 1 2 2 80 2L 16308316 16308402 GAAGCTCACAATGTTGGCC 60 16308442 16308464 TTGATGATATAGGTCAGCTCCTG 60 NA Drosophila melanogaster 61 CG4161 FBgn0028892 FBtr0080735 3 1 1 60 2L 15434079 15434097 ACGGAGGAAGATAGCAAGG 58 15434121 15434139 TCCTATCGATGTCAGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ms(2)34Fe FBgn0261529 FBtr0080623 1 1 1 80 2L 14329102 14329180 CCAAGCGAGAATACATTCGAG 59 14329220 14329240 AGAAGTCGTTATCCATTTGCC 59 NA Drosophila melanogaster 61 Ance-2 FBgn0032535 FBtr0080554 2 1 1 85 2L 13910587 13910608 GGATTGAGTACCACTCAAAGAG 58 13910652 13910724 CAAAGTGAGTTCTCCAATTGC 58 NA Drosophila melanogaster 61 CG16888 FBgn0032533 FBtr0080572 3 1 1 60 2L 13812787 13812805 CTGAAGAAGCTACTGGCAC 58 13812745 13812763 TTGACCTTCTATGCTGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16852 FBgn0028942 FBtr0080507 1 1 1 80 2L 13541000 13541021 GAGTGAATATGGACAAACAAGC 58 13541060 13541141 TCCACGATTTGATCTTCTTGC 59 NA Drosophila melanogaster 61 CG33641 FBgn0053641 FBtr0091618 2 1 1 117 2L 13529323 13529344 GGATGGATGTCTTATACTCCGA 59 13529419 13529499 GGTAAAGTTCGCTTTAAAGGGA 59 NA Drosophila melanogaster 61 CG16815 FBgn0032491 FBtr0273448 1 1 1 60 2L 13230285 13230304 AGTATCGGAGTCATCATGCC 59 13230326 13230345 CGGTAGTATAGACTGAGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0301163 2 1 2 60 2L 12714678 12714697 AAGTCCTGTCTTTCACTGGT 58 12714535 12714655 CTCGCTGATTGCCTTAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572,FBtr0301171,FBtr0089573 3 3 3 82 2L 11984778 11984798 CACATAAGTTCCATGGCAAGG 59 11984654 11984735 TTTCATTAGCCCATCCTGCT 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080260,FBtr0080263,FBtr0080261 3 3 4 185 2L 11798821 11798839 ATCAACCATATGTCGCGGT 59 11798031 11798672 GACCAAGTGACCTTTGCAG 59 NA Drosophila melanogaster 61 CG31706 FBgn0051706 FBtr0080241 1 1 1 92 2L 11530639 11530657 GAACGTACTACGCCAATGC 59 11530175 11530583 CTCCTGTACCGATTCCTCG 59 NA Drosophila melanogaster 61 mre11 FBgn0020270 FBtr0080213 1 1 1 80 2L 11283466 11283485 GTAAGGTGGTTAAGCGTACC 58 11283528 11283605 CATTATCCGCTTCCAGTGC 59 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 2 2 2 80 2L 11100218 11100310 CAGGAAATAGAAGTCATCCATTTCC 60 11100162 11100182 GAGGACCTTGGTCTTATTGGA 59 NA Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 1 2 2 80 2L 10383734 10383754 AAATATGCGACGAACTTGACC 59 10383795 10383879 AGGTGGAAATACATTGTCGC 58 NA Drosophila melanogaster 61 CG5390 FBgn0032213 FBtr0080064 1 1 1 80 2L 10304766 10304842 CCCAGTAGCATTGTTGTGAG 59 10304705 10304723 GACATATCGGTCTTCGTGC 58 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 2 2 2 88 2L 10240584 10240690 AAACAACTGATGTGACCGA 57 10240741 10240760 TCCCTTCTCGAATATACCCA 57 NA Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 3 2 2 109 2L 10011453 10011471 CATCGTGTGGGCATTAACC 59 10011539 10011616 TATAGTTGCTCTCATATAGTGGCC 59 NA Drosophila melanogaster 61 CG5846 FBgn0032171 FBtr0079891 2 1 1 60 2L 9956447 9956466 CAATCATCCGCATACTTGCA 59 9956406 9956424 GTTGGTGGCACTTAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0300866,FBtr0290197,FBtr0300870,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 9 9 84 2L 9906082 9906100 AATCACCGGAATTTCAGCC 58 9905955 9906035 CGCCGTTTGTTGATATTCTG 58 NA Drosophila melanogaster 61 CG17633 FBgn0032144 FBtr0079868 2 1 1 60 2L 9769969 9769988 TTCATTGAGGGACTGAAGGG 59 9770011 9770029 ATTGGGAGTAGGCATGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 1 4 4 80 2L 9517894 9518001 AGCTCATAAGGTTAACAGCA 57 9518041 9518062 TGTCATTCTCCATATCAGTCAG 57 NA Drosophila melanogaster 61 Or30a FBgn0032096 FBtr0079770 3 1 1 81 2L 9112307 9112378 GGTTCGGAAAGAGTTCTGC 58 9112420 9112441 AAATCTCGTAGTAAGGTGATGC 58 NA Drosophila melanogaster 61 Acer FBgn0016122 FBtr0079685 3 1 1 81 2L 8522951 8523447 GCATCTCAGTTGAATGGTCAC 59 8523490 8523508 CCAGTTGTCGCTCAAAGTC 59 NA Drosophila melanogaster 61 CheA29a FBgn0053194 FBtr0079676 2 1 1 61 2L 8477381 8477400 CTAATCCTGTGGACGGTCTC 60 8477476 8477496 CGACTGATGAACTTCTTTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 1 2 2 81 2L 8391200 8391292 GCAAAGCGACTTACAAGGG 59 8391137 8391159 CCTTGTCACCAAACTTTAGAAGG 59 NA Drosophila melanogaster 61 CG17294 FBgn0032032 FBtr0079651 1 1 1 80 2L 8377732 8377754 CTTATTTCTTCGAAGGAGCTCTG 59 8377789 8377865 CTATGTCATCATTGGCATCATCTC 60 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 1 2 2 81 2L 8364296 8364541 GCAAGGGTATTTCCCAATCAG 59 8364235 8364253 TCCTTGACATCATCTGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 2 6 6 80 2L 8261677 8261754 GCTGCATACCAAAGTTCCAC 59 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 CG7466 FBgn0031981 FBtr0079541 3 1 1 80 2L 8049149 8049169 TTCTCGATTCAGAATCAACGC 59 8049209 8049291 TGGTACATCAACCTCGTAGTC 59 NA Drosophila melanogaster 61 CG31902 FBgn0051902 FBtr0110841 1 1 1 80 2L 7888034 7888058 CTTTATAGAGATTGACGAAGAAGGC 59 7887921 7888000 GTCGCATAATCAGATAATCCTCG 59 NA Drosophila melanogaster 61 CG7214 FBgn0031940 FBtr0079499 3 1 1 64 2L 7744770 7744788 CAACCCAACTTCAACACCC 59 7744607 7744625 GAACATGACTACGGCAACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462,FBtr0079461,FBtr0079460,FBtr0079459,FBtr0079458 1 5 5 111 2L 7455128 7455210 GTATTTCACGATCAGCGGG 58 7455035 7455053 GAAGGTCTCACAGCAAGAG 57 NA Drosophila melanogaster 61 CG5177 FBgn0031908 FBtr0079441 1 1 1 81 2L 7406173 7408150 CAACTGGGACAAAGGTGAG 58 7408194 7408213 GACGATCTTCAGGTTCTTGG 58 NA Drosophila melanogaster 61 Pcp FBgn0003046 FBtr0079388 1 1 1 60 2L 7021682 7021703 AAGCAGTTTAGAACCAAACTCG 59 7021723 7021813 CAACGATGAAGTTCACAAGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 2 2 2 80 2L 6725248 6725785 AATAATACCAGGCTTCTCCTCG 59 6725826 6725844 CTTCACAACGGTCATACGC 59 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 3 3 3 82 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713837 6714564 CAAACAGTATGCTGTACACGG 59 NA Drosophila melanogaster 61 CG9531 FBgn0031817 FBtr0079270 3 1 1 80 2L 6466867 6466887 TTTGATCATCTCCAATCCTCC 57 6466753 6466825 AGGTTCTCATACACCACGA 58 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0112945 2 1 4 108 2L 6048215 6048233 GAGGAAACTAATCGAGGCG 58 6047772 6048143 GAGCTGAGCGTATTTCTCG 58 NA InUTR Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 2 4 4 93 2L 5973670 5976624 GAAGACAACACAAGCCGTG 59 5973595 5973619 CAGATAATCTCCAAGTTTCTCTACC 59 NA Drosophila melanogaster 61 CG18266 FBgn0031724 FBtr0079109 1 1 1 60 2L 5598250 5598268 AACTGGATGAAACAGGTGG 57 5598292 5598310 TGTCAAAGCCCTGATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118,FBtr0079120,FBtr0079119 1 3 3 84 2L 5580997 5581015 TAAATCGTCCCTGACGACG 59 5580871 5580889 GACTTTGCCCAGAAATGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0079083 3 1 5 107 2L 5275752 5276943 GAGTTCAGCAATTGGAGACG 59 5275664 5275682 CCTCATCGAATCCCAGGAC 59 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079086 1 1 4 83 2L 5241494 5271273 AACAACTGGTGAATTCAGTGC 59 5241431 5241449 GATCCCATTTCCATGCCAC 59 NA Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 1 1 1 61 2L 4977682 4977762 GATGTTCCGTGCTTCAAGG 59 4977787 4977805 GAACCTGCGATAATTGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL28 FBgn0031660 FBtr0078996 3 1 1 70 2L 4975039 4975057 GCATTAGCAGCAGAATCGT 58 4975089 4975161 GAGGATTCCAGCTTTGTAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15439 FBgn0031606 FBtr0077455 3 1 1 129 2L 4450355 4450782 CCAATTAATGTTCCTGCCG 57 4450244 4450263 AGCCAGATAGGTTAATCACG 57 NA Drosophila melanogaster 61 CG15439 FBgn0031606 FBtr0077455 1 1 1 128 2L 4450355 4450782 CCAATTAATGTTCCTGCCG 57 4450245 4450264 GCCAGATAGGTTAATCACGA 57 NA Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077464,FBtr0077463 2 2 2 60 2L 4382273 4382291 GCAAATAACGACGTGATCC 57 4382231 4382252 GATCCTCAAGAATTACCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31957 FBgn0051957 FBtr0077514 1 1 1 92 2L 3871859 3872180 GTTCCTTGTTTCGATGCCC 59 3871785 3871803 TTATCGCCCTCCTCAATCG 59 NA Drosophila melanogaster 61 cutlet FBgn0015376 FBtr0077541 2 1 1 82 2L 3709330 3709349 ATGACAAACACGTCTGTGAC 58 3709204 3709288 TGCGTTAGTCTTTCATAATCCC 58 NA Drosophila melanogaster 61 CG9662 FBgn0031529 FBtr0077594 2 1 1 83 2L 3376536 3376554 ATTCAGCATTCCAATGCCG 59 3376411 3376491 TATATGATACCGCCTGTCACC 59 NA Drosophila melanogaster 61 Hydr2 FBgn0014906 FBtr0077576 1 1 1 80 2L 3167068 3167089 GTGTTTACATGTCGCTAAAGGA 59 3167129 3167212 TGATGTCATCCTCCTGTTCG 59 NA Drosophila melanogaster 61 CG31953 FBgn0051953 FBtr0077575 1 1 1 60 2L 3162906 3162925 TGAGGATCGCCAACTATGAG 59 3162946 3162966 ACAAGACCTACCACAAATCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cwc25 FBgn0031452 FBtr0077712 2 1 1 164 2L 2745203 2745277 GTGGCGGAGATCTAAATCTG 58 2745404 2745422 CCAATCGCCTTAGTTCCTC 58 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0273435,FBtr0077702 1 2 2 158 2L 2671874 2671895 GGTTGTCTAATTTCGAAGTTGG 58 2672012 2672087 AGCTGCAAACATACTACTCAG 58 NA Drosophila melanogaster 61 CG9883 FBgn0031435 FBtr0077693 3 1 1 60 2L 2578691 2578710 CAGTACGGTGAGGTCTTCTG 59 2578732 2578751 CAACGCAAAGAAGACACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10882 FBgn0031408 FBtr0077810 3 1 1 80 2L 2234343 2234422 AGTAACTTCGGAAGTTCATCAG 58 2234284 2234303 TCAGGTCTTTCATGCTTGTC 58 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 3 3 3 90 2L 2229501 2229520 TCGATGAGGCACTTAAACAC 58 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077848 2 1 2 120 2L 2191941 2191959 GACCTATGTGAATGAGCGC 58 2191068 2191859 CTCATCACGATCTTTCAGGAG 58 NA Drosophila melanogaster 61 CG31928 FBgn0051928 FBtr0077929 3 1 1 60 2L 1493250 1493271 AACAAGAAACTGGGCATTAAGG 59 1493289 1493310 TGCAGTCAATGATATAGACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5397 FBgn0031327 FBtr0077920 2 1 1 103 2L 1240915 1240933 AAATCAATGGCTGTCCCAC 58 1241077 1241098 CTCCGTTTGAACTTTATCATCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5139 FBgn0031323 FBtr0077977 2 1 1 60 2L 1198701 1198719 GAAGAGGATGTACGACCAG 57 1198659 1198677 CAGATCCTGTTCCTCAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40503 FBgn0085738 FBtr0114188 1 1 1 62 U 8517827 8517845 CTGTTCTACGACAGAGGGT 58 8517871 8517889 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742,FBtr0085743,FBtr0085744 3 3 3 240 3R 26883634 26884263 AGAAAGGCAACGCAAATCC 59 26883412 26883430 CTTTGACTCGATGTGCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 3 5 6 206 3R 25705383 25705401 GGCAGTTACTCTGACTAGC 57 25723060 25723078 TTGTTGAAGCCGATGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14840 FBgn0038217 FBtr0082952 3 1 1 72 3R 10086464 10086482 ATTGTTGAACAGCTGCAGC 59 10086410 10086428 TTTGTAGGGACGAGGTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RnpS1 FBgn0037707 FBtr0082066 2 1 1 277 3R 5377880 5377901 CGTTTAACAAATCGGCAATACG 59 5378483 5378501 ATGATGAGGAGCTCGAGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cks85A FBgn0037613 FBtr0081949 1 1 1 162 3R 4541377 4541468 GAATACAGGCATGTTATCTTGC 57 4541236 4541254 TGCGTCGGAATAGAATCAC 57 NA Drosophila melanogaster 61 CG2781 FBgn0037534 FBtr0081823 3 1 1 80 3R 3809809 3810527 GCGTACATCGTAAAGGTACTC 58 3809749 3809769 GTAGACGATCAAGACTTTGCG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 3 7 11 120 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734450 2734603 TTCTGATGGACCTCTGTCAC 59 NA Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789,FBtr0301640 2 2 2 110 3R 1202651 1202670 AATATGTTGTTCCGTTCGCA 58 1202791 1202809 ATCCTTGGCGCTATAGGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14103 FBgn0036908 FBtr0074927 1 1 1 81 3L 19797504 19797590 TTCAATGTGCTTTGGTGGTC 59 19797442 19797460 TTGTTCAATCGCCAAACCG 59 NA Drosophila melanogaster 61 CG32413 FBgn0052413 FBtr0113435 1 1 1 88 3L 5896310 5896330 CGACTGTCATGTGTTATTCCA 58 5896184 5896260 CTGGCACATCTTGTTCGTC 59 NA Drosophila melanogaster 61 scrt FBgn0004880 FBtr0073165 3 1 1 82 3L 3985480 3986531 TGTTTACAACGGCTACACC 58 3986577 3986595 TCACGGTTATCTCGCTCTC 59 NA Drosophila melanogaster 61 CG30429 FBgn0050429 FBtr0072450 1 1 1 94 2R 21134451 21134469 CAGTGGTACAACGATGGGA 59 21134527 21134603 TACCGGTTTCCATTAGCGT 59 NA Drosophila melanogaster 61 Rep FBgn0026378 FBtr0086462 1 1 1 93 2R 15379766 15379843 TCATAGGCACAGGCTTCAC 59 15379895 15379918 CCGTAGTACTCATTACTATCCAGG 59 NA Drosophila melanogaster 61 IM2 FBgn0025583 FBtr0086664 3 1 1 77 2R 14274202 14274220 GTCTTTGTGTTCGGTCTGC 59 14274321 14274341 CCCGTTGATTACCACATTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6401 FBgn0034270 FBtr0086882 3 1 1 119 2R 13626558 13626645 GGCTAAAGACTGTCTTTACCG 58 13626459 13626477 GAGATACACAGATGGCGTG 58 NA Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297,FBtr0087296 1 2 2 64 2R 11821705 11821724 GTAACTTTCAAGGACTGGCC 58 11821281 11821299 TAGAAACCTGCCTTTGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30338 FBgn0050338 FBtr0088533 1 1 1 194 2R 5481652 5486092 ACCAATTGACAAGCCATGG 58 5486250 5486268 TAGAAGGCTAGTAGCGGGT 59 NA InUTR Drosophila melanogaster 61 CG13991 FBgn0031785 FBtr0079202 3 1 1 60 2L 6144248 6144267 TCAGCGATGTAGTCATGGAG 59 6144290 6144308 CGCACTTTCTCGATATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ft FBgn0001075 FBtr0077478 1 1 1 80 2L 4208816 4208899 ATATAGATTCGGGCAACAATGG 58 4208757 4208777 TGCTATCGATTCCAAACTCTG 58 NA Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 1 1 1 211 2L 2767929 2768069 GAAATTTGTTATCTCAGCTGGC 58 2767739 2767760 GCTGTTGTGGTAAATAATTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11617 FBgn0031232 FBtr0078146 1 1 1 103 2L 205203 205281 ATATGACCAGGCAGAAAGCT 59 205119 205137 ATGATGAAGCATCCAGCGT 59 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 3 3 3 134 2R 16891758 16891843 GCGAAGAAGATATGGGTAGCT 59 16891939 16891957 GTTGTTGCTGGGATGATGC 59 NA Drosophila melanogaster 61 CG30036 FBgn0050036 FBtr0088050 3 1 1 108 2R 7866419 7866437 AATGTACCTGAGTCCACGA 58 7866274 7866292 CCCTTGGTCCAGATAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 spz3 FBgn0031959 FBtr0079561 2 1 1 80 2L 7876158 7878221 AAGGCCAAGAGAATGATAAGTC 58 7876099 7876119 CGTTCTTCAAGTAAATCGGTC 57 NA Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 2 1 1 136 2R 4482146 4482371 AACATGTTCTGCAAGCTGC 59 4482028 4482046 CGCGCATTATCACAGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 1 5 5 90 2R 1491516 1491765 AAGTTCGCTCCCTAGAGGA 59 1491444 1491462 AGTACTAAAGCTGCTCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 amd FBgn0000075 FBtr0081154 2 1 2 270 2L 19112307 19112803 TTCAGCTGGATCTGCAGTC 59 19113037 19113055 TGTTACTCTGGTCCGAGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG11103 FBgn0030522 FBtr0100218 3 1 1 60 X 13676697 13676715 TCCTCATCGTCATCTTCGG 59 13676739 13676757 GATAGAAGGCCGAGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6475 FBgn0038886 FBtr0113260 3 1 1 97 3R 17225165 17225183 ATCACACCGCTATCATTGG 57 17225034 17225104 ATCATCGCAGATATGTCCG 57 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 2 2 2 100 3R 7834941 7835021 CCATGATGAGATCTCGCGT 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 CG11044 FBgn0034484 FBtr0086313 1 1 1 80 2R 16120974 16121048 AACATTGACAAGGGCAGAG 58 16121092 16121110 GTGGTAGACCAGAGTTCGT 58 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 2 5 5 114 X 4962726 4962744 CAATCTCTGCGAGAAGAGC 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 1 2 2 143 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461955 19461973 TTTCAACGTTGTCGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 3 5 5 106 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624496 6624578 CCGATGAAGGTCACCTCTG 59 NA Drosophila melanogaster 61 kl-3 FBgn0001314 FBtr0113756 1 1 1 80 YHet 37068 39040 CACGTTTCTAAGCTTCGATGG 59 39080 39100 CCAGTTTCCGTTATCATCCAC 59 NA Drosophila melanogaster 61 CR11700 FBgn0029856 FBtr0070931 3 1 1 60 X 6177124 6177144 AACGTCAAAGCCAAGATACAG 59 6177084 6177102 AGATCAAACGCTGATGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 2 2 2 80 X 20385199 20385384 GATAAGCTTTACATCTCTGGTGG 59 20385424 20385442 GACTTCCGTCTTTGTGTCG 58 NA Drosophila melanogaster 61 Sdic3 FBgn0052823 FBtr0089465 3 1 1 80 X 20087989 20088076 GTATTCTACTTTGAGCGGCG 59 20087928 20087947 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074569 3 1 2 69 X 18330824 18331043 CTTTCATCCCAAACTCCCAC 58 18330774 18330792 AGTACACGGCAGGATACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG8142 FBgn0030871 FBtr0074472 3 1 1 86 X 17738589 17738607 GACAAGAGCCAGGGTACTC 59 17738445 17738463 CACATCATCCACATTGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9673 FBgn0030775 FBtr0074362 3 1 1 102 X 16597698 16597716 AACAAACCACATCCTGACC 58 16597493 16597511 GTACTGGTTAATGGTGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6227 FBgn0030631 FBtr0074011 2 1 1 127 X 15241251 15241269 AACTTCTATGTCGAGGTGC 57 15241360 15241519 TGTGCCCAAGTCTTAATGG 57 NA Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074002 3 1 2 145 X 15188292 15188380 AACGAATTGTTGCTAGGCG 59 15188487 15188507 CATGCTGTACTCGTAAATCCG 59 NA InUTR Drosophila melanogaster 61 CG4400 FBgn0030434 FBtr0073693 3 1 1 127 X 12803068 12803087 AACTGGACAAGAAGTATCGC 58 12802713 12802978 TTTCTCGCTCTCAAAGTGC 58 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 3 2 2 117 X 10943061 10943080 ACTTACTGCCACAGATGTCC 59 10943160 10943233 ATGATGAGTCCTCGCAGAC 59 NA Drosophila melanogaster 61 RabX2 FBgn0030200 FBtr0071448 2 1 1 66 X 10311599 10311618 TAATGCGTTTCTCGGATGAC 58 10311647 10311665 GCCTTGACATCTATGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0112971 3 1 2 97 X 9905137 9905217 GGGAAACTCTATGGTCATTGG 58 9905276 9905294 GGAGGGCAGATTGAATGTG 58 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091675 2 1 3 86 X 6766877 6766895 GAACAACCATAGTGGTGGC 58 6766945 6771955 GCTAGTGACATGTGGTTGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952,FBtr0070868 3 2 2 60 X 5935722 5935740 GTTCATCACGATGGGACTC 58 5936297 5936316 GATGTAGAATCGTTCGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 1 4 4 152 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 l(1)G0144 FBgn0027296 FBtr0070414 1 1 1 116 X 2155438 2155506 ATTTCAAAGTGCCGATGCT 58 2155340 2155358 TTCTGAAGGATCCACTGGC 59 NA Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 1 3 3 103 X 1237551 1237812 GTCACCAAGGCCATAGAGG 59 1237879 1237897 CCCAAGTTCTCGTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5254 FBgn0040383 FBtr0070134 2 1 1 88 X 650464 650482 GCAACCACTCGATGTAGTC 58 650534 651850 CATTGTAGTGCACCTCACC 58 NA Drosophila melanogaster 61 CR41571 FBgn0085804 FBtr0114258 2 1 1 60 U 5607635 5607654 TTCAATGTCGTATTCCTGGT 57 5607594 5607616 CTCTAACTCCAATGAATCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42195 FBgn0085828 FBtr0114286 1 1 1 60 U 4086273 4086291 CAATTGGAGGGCAAGTCTG 58 4086231 4086251 AATATACGCTATTGGAGCTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42429 FBgn0259860 FBtr0300157 2 1 1 284 U 8043088 8043106 AGCCCGTAGGTAACTAGGT 59 8043354 8043372 GTGAATCATGCCGTACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32021 FBgn0052021 FBtr0089244 2 1 1 88 4 929764 929784 GTGTCCAAGATCACGAAAGTG 59 928542 929716 CCAAAGACCCTAAACCTTTGG 59 NA InUTR Drosophila melanogaster 61 snoRNA:Psi28S-3305a FBgn0082976 FBtr0113588 1 1 1 60 3R 24427490 24427509 AATTAAAGCGTCGGCTAAGC 59 24427532 24427550 GTTACACTGAATAGGCGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385a FBgn0082962 FBtr0113577 2 1 1 60 3R 1422156 1422177 AAGGGTTCATGTACAGTATGCA 59 1422117 1422136 GCATTGGGTTATATGGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15548 FBgn0039812 FBtr0085731 1 1 1 60 3R 26787568 26787587 ATATGTATTGCCCACCCTCC 59 26787609 26787628 TCGTATCCATTCGATGAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS18C FBgn0039765 FBtr0085625 1 1 1 60 3R 26249911 26249931 GCCGATCGACATAAAGAATCC 59 26249953 26249971 GTGCTTGCATAGGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7912 FBgn0039736 FBtr0085605 3 1 1 93 3R 25832932 25832950 TGGTATCGAACGTAGGCAC 59 25832797 25832875 ATCTTGCCCTTGGAGAAGG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085444,FBtr0085443,FBtr0085445 3 5 5 80 3R 25423004 25423023 CTGAAGTGTCTGCAGAACAG 58 25423061 25423156 CTCGATAACGTGATATTTGGACTG 59 NA Drosophila melanogaster 61 Gr98d FBgn0046885 FBtr0085188 2 1 1 80 3R 23372633 23372712 AATGCTGTCAATATAGGCGC 58 23372753 23372773 AGAACTCGCTGTATAAACAGG 57 NA Drosophila melanogaster 61 CG5111 FBgn0039343 FBtr0084880 1 1 1 60 3R 21333819 21333841 CTTCAAGAGATTCAACGAGAACC 59 21333858 21333879 CAAGGGCAAGTTTAAGTAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13618 FBgn0039203 FBtr0084643 1 1 1 88 3R 20352547 20352565 CCAATAAATCTGCGCCAGG 59 20352617 20352751 TCCAGATCGGTTCTGTACC 58 NA Drosophila melanogaster 61 Ir94h FBgn0039080 FBtr0273205 1 1 1 60 3R 19314708 19314728 AGTTTCCATGAAATGGTGAGG 58 19314749 19314768 GATTTGTTCGGCTGTAATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4624 FBgn0039058 FBtr0084401 1 1 1 80 3R 18984327 18984346 AATCTATTGTCCTTCGAGGC 57 18984199 18984287 CTCCTTCGGTATGATATCACTG 58 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 1 2 2 145 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828598 18828616 GAACAGTTTGTCCGACAGC 59 NA Drosophila melanogaster 61 CG5346 FBgn0038981 FBtr0084289 3 1 1 80 3R 18347502 18347763 ATGAGAAGCTCAAGACTGC 57 18347440 18347458 CACGGATATAGTGCTGTCG 57 NA Drosophila melanogaster 61 CG5377 FBgn0038974 FBtr0084293 1 1 1 60 3R 18293268 18293286 TGGATCGCCTAGCAATCTG 59 18293226 18293244 AGAGCCTTGACTTCGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31176 FBgn0051176 FBtr0084114 2 1 1 86 3R 17544099 17544117 AAGTCCTCCCGAAATATGC 57 17499433 17544051 AGTTATGTATCTTCTGGCCTG 57 NA Drosophila melanogaster 61 CG7044 FBgn0038854 FBtr0084035 2 1 1 89 3R 16926852 16926936 GAGCTTGATATAGTAAACAGAGCAG 59 16926787 16926805 CATCAGACGTATGCCACCT 59 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 1 2 2 67 3R 16676607 16676625 GACTAGAGACCATCGAGGC 59 16676656 16676761 CAGTTGGTTCTTGACTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0300802 3 1 2 83 3R 16405907 16405982 ATTCGAACTTTATCCTGCGC 59 16406028 16406046 CACATCGCTTGAACGTCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31245 FBgn0051245 FBtr0083773 3 1 1 139 3R 15202659 15202677 CCGGAACCTACTAGATGGC 59 15202472 15202556 ATGGGTTTGCTATCTCGCT 59 NA Drosophila melanogaster 61 CG12333 FBgn0038617 FBtr0083655 2 1 1 120 3R 14227439 14227459 CCGTAAACTCCATCAAGTTCC 59 14227282 14227357 GAAGAATGGCCCTTCTTGG 58 NA Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 2 2 2 122 3R 14100856 14107428 GCAAGAAGGTGTGGATTAACC 59 14107512 14107530 CGTACGTCTTCAGGTTCCT 59 NA Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 1 2 2 120 3R 14100856 14107428 GCAAGAAGGTGTGGATTAACC 59 14107510 14107528 TACGTCTTCAGGTTCCTGG 58 NA Drosophila melanogaster 61 MED17 FBgn0038578 FBtr0083558 2 1 1 82 3R 14016700 14016719 AGGATTTCTTTCCCAGTCCA 58 14016764 14016845 TTTGTCGAACCTCACCTCC 59 NA Drosophila melanogaster 61 Sgs5 FBgn0003375 FBtr0083461 1 1 1 93 3R 13421545 13421563 AATCGAAAGCCAGGATCGA 59 13421619 13421697 AAGTCAGGAATGGTTTGCTG 58 NA Drosophila melanogaster 61 CG6966 FBgn0038286 FBtr0113236 3 1 1 106 3R 10908918 10908936 TGAACAGTACCACCAGGAC 59 10908613 10908848 CACCTCAAAGTCTGCTCCA 59 NA Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 3 2 2 82 3R 10485960 10485979 ATATCCAAGGAGTTTGGAGC 57 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG9925 FBgn0038191 FBtr0082876 1 1 1 80 3R 9787984 9788002 GTGATGTTTCCGTTGGCAG 59 9787857 9787944 TATCCTTACTCAATATCTCGCCC 59 NA Drosophila melanogaster 61 GstD4 FBgn0010040 FBtr0082571 1 1 1 60 3R 8200204 8200225 GTACTATTACCCATTCATCCGT 57 8200243 8200264 GACCTTCTTATAATTCTCGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12224 FBgn0037974 FBtr0082505 1 1 1 80 3R 7807617 7807635 TTAGCTATAGGTGGCTCCC 58 7807481 7807574 CTTTAGGGCCATAAGGATGC 58 NA Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 3 2 3 80 3R 7642965 7642983 GTTCAGTTCGAAAGCCAGG 59 7642467 7642924 TATCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 CG6689 FBgn0037877 FBtr0082368 2 1 1 80 3R 7043877 7043896 GAAGGGATTCTATCAGCGGA 59 7043747 7043835 CAAACCTCGCACCAATATGG 59 NA Drosophila melanogaster 61 pont FBgn0040078 FBtr0082226 1 1 1 80 3R 6089066 6089085 ACACAAGTCCCTGGAATCTC 59 6089128 6089207 GTGGTGCCACGAATAACAC 59 NA Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091719 3 1 2 96 3R 4069898 4069920 TACAGATACGTATCCTTGTAGGG 58 4069976 4069994 CGTCACGTTCACATTCTGC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 3 2 2 80 3R 3804722 3804740 TGCTACTCTCCGGATTCCT 59 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG14606 FBgn0037485 FBtr0081603 3 1 1 87 3R 3040652 3040765 CTGCTCCCAGCTAAGATCC 59 3040583 3040603 GGTAGATCTTTAGAGCCACGA 59 NA Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081616 2 1 2 216 3R 2943391 2943412 AGGATATTTCTCTTGCGAACCT 59 2941384 2941402 TGGAATACATAGCCGCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TwdlG FBgn0037225 FBtr0078982 1 1 1 80 3R 74728 74922 ACCATTCAAGCTCAATATGACC 58 74669 74687 AATCACGGATGTAACGGGT 59 NA Drosophila melanogaster 61 CG11226 FBgn0037195 FBtr0078546 1 1 1 60 3L 22830499 22830519 ATCTGGATGTGCTAAGTGAGG 59 22830541 22830559 GCTCCGATTTCCATGTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 3 1 1 71 3L 22639463 22639482 AGTTTGCACTCTTGTCTCCA 59 22639516 22639620 AAATTGGACTTTCCCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7130 FBgn0037151 FBtr0078484 3 1 1 61 3L 22068706 22068730 GTAAGGATTACTACAAGATTCTGGG 59 22068669 22068687 CTTCTTGACGTCTTCGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17145 FBgn0036953 FBtr0074823 3 1 1 113 3L 20214958 20215038 AAATTTGGTGCCATACTGGG 58 20215112 20215132 TCGGATCACCGTATTATTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9392 FBgn0036895 FBtr0074948 1 1 1 100 3L 19613783 19613864 CGAGCAATACGTATCTCAGC 58 19613927 19613945 GAACTTCCAGTGATCGCAG 58 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 3 4 4 80 3L 18824236 18824260 GAGTACTGTAATCTACACAAACGTC 59 18824116 18824198 GCCAAAGTGTAATCTGCGG 59 NA Drosophila melanogaster 61 CG32196 FBgn0052196 FBtr0273401 1 1 1 80 3L 18453377 18453395 AGCAATATGCTAGCCAGTC 57 18453161 18453336 CCGAAAGTTCTCTAATTTACCG 57 NA Drosophila melanogaster 61 CG12436 FBgn0036637 FBtr0075401 1 1 1 72 3L 16522668 16522737 GTTTGATTGCGAACGTCGA 59 16522614 16522632 TTTAAGTCCCACAACGGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4893 FBgn0036616 FBtr0075425 3 1 1 187 3L 16349123 16352406 TAACAAATATCCACCATGTCCG 58 16348957 16348975 GTTATCAGCTTGCCATCGG 59 NA InUTR Drosophila melanogaster 61 CG13043 FBgn0036600 FBtr0075434 2 1 1 88 3L 16298665 16298683 ATGTTGTCGAGGATGTCGT 59 16298595 16298614 ATAGGAGGTGTGAACCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Reck FBgn0036463 FBtr0075671 2 1 1 83 3L 15004346 15004366 GGATACTAGTGAGGCAATCGA 59 15001081 15004307 GTGAAGATATCATATGATTCTCCGG 59 NA Drosophila melanogaster 61 nan FBgn0036414 FBtr0089524 1 1 1 81 3L 14181472 14181490 CAACGGAAACACCGTTCTC 59 14181351 14181428 GTTTGTTCCAACCTCGTAGC 59 NA Drosophila melanogaster 61 CG34032 FBgn0054032 FBtr0100087 3 1 1 112 3L 12883561 12883647 GTGCCAATCAGATCAGCTG 59 12883723 12883741 TATTCCGATTGCGACTCGT 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 1 3 3 80 3L 12468728 12468749 AGAGTGATGAAGAGCTATACAC 57 12468611 12468689 CTTGGGTAACCTTAACAATGC 57 NA Drosophila melanogaster 61 Sgs3 FBgn0003373 FBtr0076096 2 1 1 192 3L 11505337 11505355 GAAGCTGACCATTGCTACC 58 11505583 11505602 TTGCGTGGTAGATTGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 phol FBgn0035997 FBtr0076475 3 1 1 220 3L 9448847 9448865 TTCAGTGCAGCAATACCGA 59 9448550 9448570 CGATAGATTCTTCACGATGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4483 FBgn0035970 FBtr0076502 3 1 1 60 3L 9229285 9229305 GGATAGCTTTGTGTACTTCCT 57 9229245 9229266 TATGATGCCTCCATGTATACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13314 FBgn0035949 FBtr0076518 3 1 1 60 3L 8976052 8976072 TCTACAATGATCCCGTGATCG 59 8976094 8976112 TCCTTCTTCGTGAGCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076653 3 1 2 129 3L 8516564 8516582 TTTGCCACCAACATTTCAC 57 8516274 8516293 AATAGTAACGCAGGACTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8281 FBgn0035824 FBtr0076748 3 1 1 60 3L 7905790 7905808 GACATACAGGGATCTGCCC 59 7905832 7905850 CTCCCGATTGGTGTAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14835 FBgn0035782 FBtr0076866 2 1 1 60 3L 7430221 7430240 TATTTGATGGCCCAATTCGG 58 7430180 7430199 GGACATTGACGGTTAACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13299 FBgn0035694 FBtr0077013 1 1 1 91 3L 6225294 6225375 TCATGCAGACAATCAACGC 59 6225221 6225239 TTTCTTGAACCATTCGCCG 59 NA Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 3 2 2 80 3L 5773226 5773496 ATAGAAAGCACGAGTAAGGTG 57 5773538 5773556 CTCGAATCTTTCATGGGCA 57 NA Nonspecific Drosophila melanogaster 61 CG18869 FBgn0042179 FBtr0073204 1 1 1 80 3L 4060515 4060533 AGTTCCCAAGACTATGGGC 59 4060575 4060652 ATCACTAAGTGAATCAGTGGC 58 NA Drosophila melanogaster 61 Drs-l FBgn0052274 FBtr0073081 2 1 1 60 3L 3335757 3335775 TCCTAATTGTCCTGTCCGC 59 3335715 3335733 GCATGTGATTCTTCCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 3 2 2 104 3L 2662262 2662333 ATCTACGTGCCATGTCTGG 59 2662401 2662419 TATTCCGATGATTCCGGGC 59 NA Drosophila melanogaster 61 CG32313 FBgn0052313 FBtr0072830 3 1 1 80 3L 1545522 1545540 CAAGTACGGTAATCAGCCC 58 1545392 1545480 TTCCTGACTATTTCATCTGCG 58 NA Drosophila melanogaster 61 Trh FBgn0035187 FBtr0072638 3 1 1 93 3L 1191110 1191187 CAAGGAGCAAATGAGAGCT 57 1191035 1191054 ATTCGACAGGACTTCAACAC 58 NA Drosophila melanogaster 61 CG13898 FBgn0035161 FBtr0072599 2 1 1 60 3L 803899 803917 CTTCGAGCTCTGTGATCCT 58 803857 803876 CACTTCTCCCAAATCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RabX6 FBgn0035155 FBtr0072577 3 1 1 93 3L 690715 690733 CTTCATCACGGATACGGAC 57 690790 690957 GAGTTGGAGCTTGATCTGC 58 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 2 2 2 80 3L 571004 571087 GATTTCCACACTGTGCAGC 59 571129 571149 GATCGTGAACGTCATGTTCTC 59 NA Drosophila melanogaster 61 NitFhit FBgn0024945 FBtr0072483 1 1 1 128 3L 203777 203848 CAGTAAACAACTAGCCGGC 58 203940 203958 CGCACTTTGATCCTTCCTC 58 NA InUTR Drosophila melanogaster 61 CR30029 FBgn0050029 FBtr0088109 1 1 1 60 2R 7133651 7133670 CTCTCCACGAAATCACTGAC 58 7133691 7133711 CGATGGACAGAAGGATTAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33419 FBgn0053419 FBtr0086411 1 1 1 60 2R 15629367 15629385 ATACATCGGTTCTCGTCCG 59 15629325 15629343 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg1 FBgn0045800 FBtr0086842 3 1 1 81 2R 13586923 13586944 GTCAAATTTATCCACACGTGTC 58 13587394 13587595 TTCCGTCTATCTTTGCCGT 59 NA Drosophila melanogaster 61 CG13578 FBgn0035000 FBtr0072289 3 1 1 227 2R 20265760 20265833 CAAGAAGGAGTACCCTGCC 59 20266021 20266042 TGTATGATCTCCAGTTTCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Fmo-1 FBgn0034943 FBtr0072150 2 1 1 81 2R 19850761 19850839 AGAACCTACGAACCAACCTG 59 19850883 19850901 CTCACATAGGAAGCCTCGT 58 NA Drosophila melanogaster 61 CG4554 FBgn0034734 FBtr0071833 3 1 1 80 2R 18378872 18378891 GATTCGCAATATACGCTTCC 57 18378931 18379013 GTAAACATAGCCGTTCTTATGC 58 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086538,FBtr0086539 3 2 4 182 2R 15338968 15338986 AATCGTTCACATCCAAGCT 57 15335987 15336005 CTGTGTAATGACCCTTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5323 FBgn0034362 FBtr0086706 3 1 1 227 2R 14502745 14502824 AAATGCAGAATGAGATGCAC 57 14503110 14503129 TCTGATCCTCATTGGGACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5224 FBgn0034354 FBtr0086697 1 1 1 100 2R 14391270 14391289 CCATCCTCTATTACGCTCCC 59 14391352 14391766 CTTTACGTTGACCAGTCGC 59 NA Drosophila melanogaster 61 Ote FBgn0003022 FBtr0086768 3 1 1 60 2R 14163598 14163618 GACACTGATTCCAAGGAAGAC 58 14163558 14163577 GCAAACGAGCTAGATTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4802 FBgn0034215 FBtr0086916 2 1 1 147 2R 13315590 13315682 CCGGTCAAGATTGGTATTATTGG 59 13315789 13315807 GGAGTACGCACTGTACTCC 59 NA Drosophila melanogaster 61 CG9642 FBgn0034183 FBtr0086973 3 1 1 168 2R 12934391 12934409 AAAGCAGAATGACACGCTG 59 12934596 12934671 TAACAGACGGCACTTTCGA 59 NA Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 2 2 2 80 2R 11400205 11400223 GCTGGACTACTATGTTCGC 58 11400267 11401265 CGAATCAAACCCAATCGGT 58 NA Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 1 2 2 80 2R 9089462 9089480 CACGGAGGAACTTTACCAG 57 9089523 9089606 GATGTATTGCTGGGATAGCT 57 NA Drosophila melanogaster 61 Nrk FBgn0020391 FBtr0087728 2 1 1 98 2R 9048805 9048883 CCATGTGTCCGGATTATGTG 58 9048942 9048962 CAGCCAAGAGAAAGATCATCG 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 3 2 2 91 2R 9040863 9040942 CCAAGATAAAGACCAACATGGA 58 9040793 9040811 TAATACAGCCAGCTTTGCC 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 3 2 2 61 2R 8574566 8575103 AATGTCGAGGATAATGAACCC 58 8575126 8575144 TCATCATCCAGGTCATCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 3 3 3 91 2R 8212092 8212181 ATACTGTTGCTCCTATCGGG 59 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17739 FBgn0033710 FBtr0087893 2 1 1 80 2R 8194903 8194924 GGATGATAACTATGTGCTGTCC 58 8194962 8195076 GCACTGAGGCTAACATTATACC 59 NA Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088152 3 1 2 121 2R 7265746 7266039 TAACGACATGCGAATCTCC 57 7265643 7265661 CTATGAGGACAATTGGCGG 58 NA Drosophila melanogaster 61 CG8216 FBgn0033358 FBtr0088671 1 1 1 96 2R 4851216 4851290 GGTGATCAACGGAATGTGC 59 4851138 4851156 TACACAGTCGAAGGCATCG 59 NA Drosophila melanogaster 61 Lcp4 FBgn0002535 FBtr0088744 2 1 1 108 2R 4325203 4325280 GTTCAAGATCCTGCTTGTCTG 59 4325350 4325368 CTTGCTTACGAAGCCATCG 59 NA Drosophila melanogaster 61 CG11196 FBgn0033248 FBtr0088870 1 1 1 126 2R 3881839 3882027 CGACGTAACTACAAGCACG 59 3881731 3881749 CATTCGTTCCGATGGTCAG 58 NA Drosophila melanogaster 61 CG30494 FBgn0027604 FBtr0088918 2 1 1 60 2R 3529408 3529428 CTGATGCCCTAACTCAATCTG 58 3529448 3529468 ATCTCTACATTATCCAGCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pwn FBgn0003174 FBtr0088962 2 1 1 80 2R 3186005 3186145 GAATCAATAAGAGCGCTGGAC 59 3186187 3186205 GATGTTGTTCACCTTCGCC 59 NA Drosophila melanogaster 61 phtf FBgn0028579 FBtr0086125 1 1 1 80 2R 2630260 2630352 TGAAATAGTTGCATGGTACCAG 58 2630392 2630411 AATATCCTCTGTTCGACGGT 58 NA Drosophila melanogaster 61 Tdc1 FBgn0259977 FBtr0086143 1 1 1 94 2R 2567571 2567589 CTTGGATCCGGGTTACCTC 59 2566507 2566525 TCTTCTGCTCGAAGTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 BubR1 FBgn0025458 FBtr0086032 2 1 1 80 2R 1857711 1857729 GCCCACTAACTACTGGGAG 59 1857487 1857670 GCATAGGATGGAATCATTTGCT 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-525c FBgn0083036 FBtr0113542 1 1 1 66 2L 20418859 20418881 GATCTTCCTGTAACTTGTGTCTC 59 20418907 20418925 TATTCAGGATGCCGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942 1 1 2 118 2L 22129887 22130106 AACCACGTACATGGTAACAC 58 22129788 22129808 CTTTAGCCAAATGGTTGTCAG 57 NA InUTR Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085906 3 1 2 108 2L 21829829 21829847 CGAGATCTACAGACAGGCG 59 21833431 21833449 GGAGTTTGAGTCGTGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 His4:CG33877 FBgn0053877 FBtr0091881 1 1 1 60 2L 21514613 21514631 GAACGTAATTCGTGATGCC 57 21514571 21514589 GGCTGTAACTGTCTTCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Pomp FBgn0032884 FBtr0081414 2 1 1 147 2L 20787981 20787999 GAACTACAACGAGCACCAG 58 20788110 20788415 GTCCATGAAGTTGCTGGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 spi FBgn0005672 FBtr0081270 1 1 7 133 2L 19572582 19572600 TTTCGAATCTTTGGCGGTG 59 19569194 19569213 ACGTAAACGTTGAGTTAGGG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG13077 FBgn0032810 FBtr0081257 3 1 1 117 2L 19566333 19566351 CGTTCTCAACCAGATGTGC 59 19566432 19566516 GAAGGAGAACCCGATGGTC 59 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0081167 1 1 3 103 2L 19119392 19119413 GCCACATACCCATTAGTAACAC 59 19119233 19119329 CATGTCGATCGAAACCTTGG 59 NA Drosophila melanogaster 61 Sgt FBgn0032640 FBtr0080982 2 1 1 60 2L 17473980 17473998 GTACAATGAAGCACTGCTG 57 17474022 17474040 GATCGGATTCTTGGGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300003 1 1 4 220 2L 16559933 16652749 AAGTTTATCGAGGTCCCGC 59 16657519 16657537 CACCGGAGTGTAGAAATGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 3 1 4 224 2L 16622826 16652745 ATGTCCACGGAATACGGTC 59 16657519 16657537 CACCGGAGTGTAGAAATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG16879 FBgn0028904 FBtr0080596 2 1 1 80 2L 14105300 14105319 TCTACAATGTGCACATGGAG 58 14105360 14105479 TTTCAGTGATAATGCGGTAGG 58 NA Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 3 1 1 220 2L 14043120 14043139 CTATAGCCGAAGACAAAGCC 58 14040821 14042937 ATCCTTGGCACGACTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Acyp FBgn0025115 FBtr0080555 3 1 1 60 2L 13912336 13912354 ACCGTGAAGGGTTACATCG 59 13912378 13912396 TGAGCCACTCCTTCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ics FBgn0028546 FBtr0080511 1 1 1 80 2L 13639910 13639928 CATCGCCGAGCAATATCTG 59 13639785 13639871 CGGTTGTAGATGATCTTATAGGTC 58 NA Drosophila melanogaster 61 CG9254 FBgn0028513 FBtr0080512 3 1 1 60 2L 13595665 13595686 GAGTGGAGATTAGTCTTCTGGG 59 13595626 13595644 AATACACAATCGCCGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 1 1 8 82 2L 12516484 12516502 CGGATACCGTTATCAGCAG 57 12458212 12477121 CTTGACCAGATCCATTGCC 58 NA Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0080338,FBtr0301019 2 2 2 82 2L 12163034 12163471 CCATTCAGAATATCCCTGTTGAC 59 12163513 12163531 CGATGCCGAAAGAGATAGC 58 NA Drosophila melanogaster 61 salm FBgn0004579 FBtr0089913 1 1 1 81 2L 11436265 11436284 GAAGCAACACATGCTAACTC 57 11435916 11436224 CTCACTCATATACTTTACGGCA 57 NA Drosophila melanogaster 61 Rsf1 FBgn0011305 FBtr0080079 2 1 1 87 2L 10263366 10263384 TGTATGTCGGCAATCTGAC 57 10263297 10263315 ATCCACACCGAATTCAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 1 4 4 126 2L 10248910 10249108 CAAGGAATAGTATGCGCCG 58 10248802 10248823 GCTTCATTAGCTTGAATTCCCT 59 NA Drosophila melanogaster 61 Gdi FBgn0004868 FBtr0079862 1 1 1 85 2L 9494280 9494298 CAGCTACGTTTACAAGGGC 58 9493095 9494232 CGAACATACCCATGAGATCG 58 NA Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 2 3 3 118 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674362 8674773 ATCATAGATTCGCGACACG 57 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0301187 2 1 2 80 2L 8213247 8213344 GAGACGATCTCAATATCCTTCG 58 8213384 8213403 CTGTACGGACAATAAGCCTG 58 NA Drosophila melanogaster 61 CG14537 FBgn0031954 FBtr0079526 2 1 1 60 2L 7840743 7840763 AGGGATATAACCAGTGGAGTC 58 7840784 7840803 AGAAATCCATATTGGCCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 1 2 2 87 2L 7475794 7475812 CAACGGTTGTGAACTGACC 59 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 60 NA Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079379 1 1 2 152 2L 6800283 6800302 GCGTTACCTTGTTAACAAGG 57 6800099 6800169 GCTTAGAAGCCACAAATGTG 57 NA InUTR Drosophila melanogaster 61 CG9021 FBgn0031747 FBtr0079154 3 1 1 116 2L 5904636 5904657 ATCGATTGGTGGTCATATTCAG 58 5904411 5904429 CATCTGGAAAGCCATCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14014 FBgn0031718 FBtr0114511 1 1 1 60 2L 5550524 5550544 CCAGTTGTATCTGATGAACGG 58 5550484 5550503 CATTGCACTTGTAGTCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15440 FBgn0031607 FBtr0077454 2 1 1 60 2L 4454353 4454371 TGAACAATTATGGCGTCCG 58 4454250 4454329 TCATGTAGGACTCCAGGCT 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Sr-CI FBgn0014033 FBtr0077467 3 1 1 111 2L 4122569 4122712 TAGGTTCAGAGCCAATTGC 57 4122785 4122805 GAATATCACCTGGAAGTCCTC 57 NA Drosophila melanogaster 61 slp1 FBgn0003430 FBtr0077499 3 1 1 61 2L 3826311 3826329 GTGCTTCACGAAGATTCCC 58 3826354 3826372 CCAGGATCCAGTAGTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15414 FBgn0031542 FBtr0077568 1 1 1 88 2L 3481905 3490840 AAAGTGAAGATGCCTTACCAC 58 3481837 3481855 TAATGGTAGCCCACATCCG 59 NA InUTR Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 2 2 2 71 2L 2226001 2226076 ATTCTCATGATGCAGCACG 58 2225948 2225968 AAACCCATGACCCTTAATGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 3 5 5 81 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938581 CTTGATCCATCCAAGTTGGC 59 NA Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085,FBtr0078086 1 2 2 60 2L 462816 462837 CTTTATGTACGAATCTCTGCCA 58 462777 462795 TTGATGATCCACGACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U2af38 FBgn0017457 FBtr0078133 3 1 1 113 2L 294522 294542 AAGCGGGTAGATAAGTTACAC 57 294361 294447 GAACAGTTCACCTTGTCCT 57 NA InUTR Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 3 3 3 128 2L 75002 75079 TCTGTAAACTGCGAGAGGT 58 75169 75189 CCAAATGTCCTGTACTTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0078164 1 1 4 196 2L 33262 33854 AACTTGCAAGCTCGAAAGC 59 33084 33102 TCTTGCCAACGACTTAGCA 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 3 2 3 80 2L 199736 200132 CCAGTCTGAATGATTCTACGT 57 200173 200192 CACCTCGCATTAAATGATGC 58 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 1 3 5 90 2L 849927 849945 AACATGACCATCGGATCCT 58 837335 837356 CCATCGATATGGATTTCACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 1 4 4 85 2L 1085132 1085214 CCAACTCATCAATGGTGCC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 2 5 6 196 2L 1726645 1727654 AAGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 3 2 2 126 2L 2159241 2159325 TGAGCCCAATACAAATGGC 58 2159133 2159152 GTCGACGATCTTGAAGACTC 58 NA Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 3 1 1 72 2L 2696063 2696083 ACATACAGCGATACTTGAACG 58 2695953 2695971 AGATGGAACTTGGACGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 1 2 2 154 2L 2850267 2850342 ACATGAAGGATCGAGCCAC 59 2850131 2850149 GTGATCCTGTCCCATCTGG 59 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077609 3 1 2 196 2L 3278603 3279271 GATATCGAAGGGAAATGACAGC 59 3278428 3278446 AGTGATCACAGGACGTTCG 59 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 1 3 3 81 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336332 3336350 TAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 2 4 11 180 2L 3626210 3634252 TTATGTCATGGAAGATGGACG 58 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290079 3 1 9 135 2L 3879753 3879773 AGAAATTAGCCTACGCATCCA 59 3879054 3879657 TATTAGCATTTGACGCTGGC 59 NA Drosophila melanogaster 61 CG31917 FBgn0031668 FBtr0079037 3 1 1 294 2L 5010736 5010755 TATGAAAGGAGTGCTGGTGG 59 5010403 5010421 CTTGATGCGGTTGGATTCG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 1 5 8 92 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 2 5 5 87 2L 5155462 5155481 TTTCTGTGAGAAGACCCTGG 59 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079075,FBtr0300012 1 2 3 87 2L 5364410 5364784 CAAGAAAGACTCAGTGGCC 58 5364835 5364853 GATGCGATTCTGATTGGCC 59 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 3 4 4 112 2L 5984932 5985036 TACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079228 3 1 2 80 2L 6012035 6012053 AATGGTGCACAACTCTAGG 57 6011923 6011991 TCCTGTAGGTTTCCTTCGT 58 NA Drosophila melanogaster 61 CG34179 FBgn0085208 FBtr0112372,FBtr0299809 1 2 2 60 2L 6048187 6048208 GAGGTAATACACAACTTTCGGG 59 6048148 6048166 GCCGTTTATCCAATCGCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0113411 1 1 2 122 2L 6494991 6495009 TGAGGACGAACTGGATTCG 59 6495093 6496065 CTACGGAGTCTATTCTGGAGG 58 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262 1 1 2 80 2L 6495090 6495247 GCACCTCCAGAATAGACGT 59 6495290 6495309 TCCACGGCAATCTTATTCCT 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 2 3 6 121 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0290119 1 2 3 82 2L 6975786 6975804 CAGAACAATCGTGTGCGTC 59 6975124 6975740 ACGGGATCATTGACCACTG 59 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 3 3 3 105 2L 7100545 7107149 CACTTCTTCGTGAAGAGCAG 59 7100459 7100477 TCTCCTCGTTGTAGGTCGA 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079462 1 1 5 118 2L 7455749 7455831 TTAACGAGGTGTTGAAGAACC 58 7455651 7455671 GGTTACAATGGTGTACATGGA 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079513 3 1 5 142 2L 7698542 7698736 CTTACAACACTGAATTTCCCGA 59 7698421 7698439 TATCTCTACCGGCTGAACG 58 NA Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 3 2 2 61 2L 7817638 7817737 AACCTGTATAGATTGTCAGGACTC 59 7817755 7817775 ATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079655 3 1 6 92 2L 8384884 8386224 AACCTTCAACAGATTCCCGA 59 8386279 8386297 CTCGTAGTCAGAGGCATCG 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 1 4 4 95 2L 8536986 8537004 AATAATTCGCTGACGGTGC 59 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 3 3 3 83 2L 9549654 9550211 AGGTTAAGGACTGGTTTGTG 57 9549590 9549609 TGTAGACAAATAGAAGCGCC 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079912,FBtr0079914,FBtr0079915 3 4 6 98 2L 9802417 9806444 GGAGTTACAATTCTTCTATCGC 57 9798295 9802359 GAAGTAGGTGCCTAACAAGG 58 NA Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 1 2 2 80 2L 10229119 10229196 GAAGCTATACTCGAACACGA 57 10229058 10229076 TTTGTTATCTGGCTCAGGG 57 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 3 5 5 81 2L 10296850 10296948 CGTTTCTAAAGCTAAGCTCGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 1 2 2 82 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492702 10492794 TAATGGACGTCAACTCCCT 58 NA Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 2 2 2 81 2L 10745706 10745796 CTCTTCGATCCACCAAACG 58 10745643 10745667 GAGATCTTCTTATGTCATCTGTGTC 59 NA Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 1 1 1 60 2L 11695186 11695206 AACCTGACTAGGAACGTTGAG 59 11695313 11695332 TGTCGAATCCCAAGAATCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 1 3 3 81 2L 12037051 12037165 TATAGCTAATGACTATGCTGATCCC 59 12036994 12037014 CTGATCCAGCTGGATGTAGAG 59 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 3 3 3 82 2L 12037204 12037223 GAACTTTCCATCTGCTGTGC 59 12037051 12037162 GGGATCAGCATAGTCATTAGCT 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 2 2 17 113 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727110 12729196 AGTACGAGGTAACTTGGCC 59 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 2 3 3 81 2L 13171658 13171751 AATACTCAGTCGGTCAAATCG 58 13171597 13171615 TTAGCTCCAGCTTGATGCT 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 1 5 5 80 2L 14324567 14324587 CGTAAACATTCACTTGCTTCC 58 14324629 14324703 GTTCCCGAAGTGAAACCTG 58 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 2 5 5 160 2L 14977341 14977360 TATGAAGGCTTTGACAGGTG 57 14977069 14977218 TAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 2 4 4 82 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065385 15065404 CATCAATAGCCTCCTTGACC 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 1 2 3 111 2L 15679210 15679228 CATTGGAGCTGCTTTGTGG 59 15673029 15679135 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 1 5 5 83 2L 15758195 15758215 CAATATGTGGACGGATAACGA 58 15758070 15758151 GTCGGATTGCCATATCTAGC 58 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 3 5 5 85 2L 15759355 15759429 GTATTCGCCGAAGACTGGT 59 15759288 15759306 AGGCTCCACGAATGAACTC 59 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080822 2 1 2 80 2L 16238937 16239214 AAAGGCGGTTATGGAATACAC 58 16239254 16239274 TTCGAAGCTGAAGACTTTCCT 59 NA Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 1 2 2 91 2L 16310057 16310075 CTTTGTACCGGAACATGCG 59 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 1 2 2 80 2L 18535125 18535202 CAACTCCTTCCAGATTAAAGCC 59 18535066 18535086 TGATCAAAGTGATGATGCTCC 58 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 3 2 3 88 2L 19166348 19168105 AAGCAGTAAAGCTGTTACTCCT 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 3 2 3 82 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790647 20790665 GGCAATCCAATATCCCTGC 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 1 9 9 88 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877070 20877157 AAATATACTGGGTACTCAGTCCC 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0301276 2 1 3 83 2L 21138355 21138730 GGTAGAATCTCTTGATCAGACGA 59 21138294 21138312 TGGTAAACCTGCTCCTGTG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 3 2 3 61 2L 21312009 21312027 TACGGAGTGGCTGTATGAC 58 21312104 21312124 CTTCATCATCGCCAATAAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 1 3 3 80 2L 22364224 22364242 CCATTACGCCAGTTGTGTC 59 22364283 22365202 GCTTTGCGAAATAAAGATCTGG 58 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 1 3 3 82 2L 22820431 22820454 CAAAGGATATTGTGGTAGCTAGTC 59 22820493 22831521 TGCCTCCTCAAATTTACTGTG 58 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111125 3 1 3 196 2L 22817649 22817723 ATCAGTTGTGACTCTTGGG 57 22817934 22817953 ACTGAGTTTCCTTGATGGTC 57 NA Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 1 2 2 92 2R 1249045 1249113 TGACGAAGATGGTAATGAGG 57 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 2 4 4 89 2R 1595873 1596126 CGCTAACATAGATCTCAACACTG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086115,FBtr0086116 2 3 3 60 2R 2557136 2557154 CTTAACGAGGCCTACACCT 58 2557177 2557196 ACTCTGACTTAACCAAGCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190 2 1 2 100 2R 2560386 2560466 TAAATTCCAAGGGCAACGC 59 2560304 2560322 GAGTGATTACCACCACAGC 58 NA Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 2 2 2 131 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579725 2579803 TGTAAGCCATCTATAGTATCCGG 59 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 2 3 3 87 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2751999 2752017 CATCAGACCAATACCACGC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 3 11 11 89 2R 2764982 2765001 AAAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30160 FBgn0050160 FBtr0086178 1 1 1 84 2R 2892912 2892930 TTCGTAGTGGCCTTCTTCG 59 2893042 2893060 GAATCAGCATGCAGATGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111052 3 1 59 80 2R 3236477 3242404 TCCAGTACCCTTCTTTAGATGG 59 3236418 3236437 TTCACACGGTCATTTAGCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111098,FBtr0111062 1 3 59 80 2R 3236477 3238105 TATCCAGTTCCCATTATGAGATGG 60 3236420 3236438 CACACGGTCATTTAGCACC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 2 5 6 83 2R 3522438 3522456 CTATCCGATGAGGGCTAGG 58 3522503 3522574 CTAACGCTCTCGAATTGCA 58 NA Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 3 1 1 83 2R 3549897 3549915 CTGTGCTCCATGAAGTCCA 59 3550029 3550049 GGCGTTGTTGATAAGAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 2 4 4 85 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806336 3806416 TCGATAAGAACCTCTTCGCA 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140 1 1 2 92 2R 4004604 4004682 CATCGATGAGCGCAAATCC 59 4004530 4004548 ATGGAGTCGCAAGTAGAGG 58 NA Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 3 2 2 96 2R 4496812 4496830 AAAGTACAAGTCGCGTCTG 58 4496889 4496968 ATTGGAAATCTTGGCTTCCC 58 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 1 3 3 80 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619838 4619858 ACTTCGAGATGAAGAAGTCGT 59 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643 2 1 2 161 2R 4782943 4782961 AGCTTAATCCCAAGGAGGA 57 4783144 4783468 TATCTTGCGTCTGATGGGT 58 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 1 4 5 94 2R 4788974 4788992 TTAGCCCGTAGAGTTCGAG 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385 3 1 2 102 2R 4859005 4859023 GACGAAGAGGACGTTAACC 58 4858605 4858939 AAGTCGAGTGAATCTTCCG 57 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 3 2 12 183 2R 5006307 5006325 CCACATCAACGTCAAACAG 57 5006543 5009250 TCATTATCCTCGGATTGCTG 57 NA Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 3 2 2 143 2R 5010059 5010134 AGGAATTTGTCAAGCTAAACCC 59 5010238 5010256 TCAAATCCCGCGGATAGAG 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 1 3 3 80 2R 5323910 5323928 TCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672 2 3 4 97 2R 5457654 5457729 ATCACGTAAGGTCATGCGA 59 5457575 5457594 GTTCTGTTGCGTGTACAGTG 59 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122 3 1 4 134 2R 5456174 5456193 GGAACGATTGATCGTGAACC 59 5455872 5456081 CCGAAATATTTGGTGATCTCTGG 59 NA Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 3 2 2 81 2R 5491678 5491761 CGTTCAGGAATATTCGCCAC 59 5491804 5491823 CAATGTGACCCATTCGTGTG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 2 2 10 82 2R 5994291 5994978 TTAGCTAAACAGGCGTTCG 58 5995024 5995042 ATGATGAGTGTCGAGTCCT 57 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 3 2 10 82 2R 5994292 5994979 TAGCTAAACAGGCGTTCGA 59 5995024 5995043 CATGATGAGTGTCGAGTCCT 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 2 4 4 80 2R 6096141 6096224 GTCAGGACGATCAGATATTACTG 58 6096083 6096101 AGAGATCAAGCAGTCTGGA 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 3 10 17 83 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182825 6183262 TCGATTGTTCTAGATTCCCG 57 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 2 2 2 83 2R 6208324 6208401 TCACCACTGATATTGAATCTCC 57 6208445 6208463 TATCCTTTGCTGAGTCAGC 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089363 1 1 26 94 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6406866 6419549 GGTTTGTAGAGACATCTTGGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 1 4 4 80 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269385 7269466 ACCGTGATCAACCTTATCG 57 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0113066 1 1 3 85 2R 7469646 7470535 GAGCATTATGAAAGCGTATGC 58 7469581 7469599 GTTTCTTCGAGGGAGTTGC 58 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088073 2 1 2 85 2R 7556171 7556775 CTAACCCGAGTAGGTGACG 59 7556824 7556842 ATTGTGTCCAAACTGGTCG 58 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 3 2 4 121 2R 7784025 7784108 CAATCGAGATTTGTCGTACAG 57 7783924 7783943 CATATTGTTGAACTGCACCG 57 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 1 3 3 121 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089669,FBtr0089671 2 2 4 179 2R 8191213 8191231 TAATCTCTACGGGACCCTC 57 8190827 8191070 TTGGCATAATTACGGAGGG 57 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669 3 2 4 180 2R 8191471 8191490 CAAGGAAGTGTCCAAGATGC 59 8191252 8191330 ACTCAGCTTGTTGTTTACCTG 58 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 3 3 3 93 2R 8212163 8212183 TCATACTGTTGCTCCTATCGG 59 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 3 4 4 103 2R 8229051 8229069 AGAGTGTTCCACCGATCAC 59 8228908 8228926 TGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 2 3 6 80 2R 8766205 8766566 CAATACCAAGATCCCAACCAG 58 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 IM10 FBgn0033835 FBtr0087654,FBtr0087655 1 2 2 60 2R 9294853 9294873 CGTTTGTTAACCGAAAGAACG 58 9294954 9294972 AAATTGGGACCACTGATGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388 3 1 2 85 2R 9397222 9397304 CTACTTGACCGATTCCCTAGAC 59 9397350 9397368 AACTCTTCTCCGACGTTGG 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 2 3 5 74 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846589 9846712 ATATTCAGGGATCGTCCGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 3 5 5 80 2R 10790225 10790304 CTGTCCGACAGTAATGGCA 59 10790163 10790183 ATCCAGCAGTATGGATACCAC 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007 2 1 4 153 2R 11027461 11027479 CTGCTCTGCGATTACAAGG 58 11027596 11027989 GATTATCGTGCGGATGCAC 59 NA Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 3 2 2 81 2R 11035855 11035926 TATAGATATAGGCTGCGGCTC 58 11035969 11035987 TTCCAAAGCCAACATGTGC 59 NA Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 3 2 2 122 2R 11068204 11076267 CCAACGACAAGGATCTGTG 58 11076350 11076371 TCTTGGTTATCTCCTGAATGTC 57 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 1 3 3 80 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204762 11204781 TCGTATTCCTGAGTTTGCCA 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 1 5 5 80 2R 11211645 11211717 GCCTGATGCAATGAAACCC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302790,FBtr0302791 2 5 13 101 2R 11838964 11840354 CACTTAACATGACGTTGGAGTC 59 11838884 11838902 TCACCTGCAGACAGATCTC 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 1 4 13 80 2R 11846817 11847308 CCTCGTACTTCAGAGATCCAC 59 11846757 11846775 ACAACGAGATGTGAGTGGG 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 1 3 3 80 2R 11882020 11882038 TATCCTCAATGTGGACGGT 58 11881893 11881978 GCTTCCTCACTGGTAAATGAG 58 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0113084 3 1 5 109 2R 12093077 12093224 CTTTCCGATGCACGTAAGC 59 12092986 12093004 TTGCGATAGCGGGTATAGG 59 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 2 3 3 60 2R 12306463 12306536 CAAGTGCAATAAGGCCTTGG 59 12306422 12306440 TCCATGGATACACAAACGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113089 1 1 4 80 2R 12648209 12648920 GATGCGAATAAGGATGAGCTC 59 12648149 12648167 CGTGGTGGATCCATTACGA 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 106 2R 12677130 12677224 GATCAGTACAAGCGCTCTC 58 12677294 12677312 GCCGGAGTAACTACTTCCA 58 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626 1 1 6 147 2R 12901493 12903177 TTATGTATTTGCGGCCGTC 58 12901364 12901383 GATATGGTGTGATTGTCGGG 58 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086981 2 1 2 161 2R 12996633 12996651 ATCGATGTGGTGGACAAGG 59 12996776 12997684 CTCATCCTCGTGGCTATCG 59 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 1 1 2 76 2R 13345339 13345357 TAAGAGATCCACCGATCGA 57 13349518 13349536 GGCTCTTAGGTATTCCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 1 5 5 172 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400427 13400445 CTCAGAGTGGGTCAGATCG 59 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 1 3 3 82 2R 13577313 13577390 ATCTTGAGATCCAACGACTC 57 13577435 13577453 ATCTGATGGGTAGGTTCCT 57 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 2 2 4 86 2R 13619770 13619836 CGAACTATTGGTCGCTTGG 59 13619886 13619904 AAGCTCATCACGAACAGTG 58 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 3 2 4 80 2R 13619710 13619730 TAAGTACATCGACATGTTCCC 57 13619769 13619859 CGGATATAGTCCAATAGTTCGT 57 NA Nonspecific Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 3 2 4 132 2R 13755953 13755972 CTTCAAGATGTTGCCATCGT 59 13755051 13755796 ATCTTCGTCGGAAACTCCC 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 3 2 2 98 2R 13987097 13987187 CGAAGATAAGCATGCATAAACG 58 13987246 13987264 CAGATGAGCATTGTGAGCG 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 1 2 2 84 2R 14058152 14058230 GAAATAAGGGTTGCCGTCG 59 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944 3 1 4 83 2R 14645588 14645606 GAAATCTTCGCCAGGACAC 58 14645470 14645542 CAGAGACAGAATACTGCAGC 58 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 2 5 5 96 2R 15023508 15023528 CTACAACTGCAAGGTGTATGG 59 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 1 4 5 94 2R 15024321 15024463 TCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 3 3 3 93 2R 15280209 15280227 ATGACTATTGTGAGCGCTG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 3 3 3 83 2R 15554965 15555046 ATTGTGGGCAAAGAAGCAC 59 15554900 15554918 GTTCTGGCCACTAACATGG 58 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524 2 1 3 158 2R 16889782 16889801 GATCGATGACATGCTAGCTG 58 16889922 16890004 CTGCTACTTAGGTGATGCG 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 2 8 15 87 2R 16911181 16911199 GTTAACAGCCAGTTGCGAG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 2 2 8 112 2R 17187801 17187819 CTCCAACCAGAGTCCTTCC 59 17187892 17191402 AGCGATTTATGTTATAGCCAGG 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273206 2 1 6 126 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286076 17286690 GGTGTATGAGTGTTTATGCCG 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273206 3 1 6 126 2R 17286779 17286797 GATCCGGACTATTCTGGCT 58 17286077 17286691 GTGTATGAGTGTTTATGCCGG 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 1 2 2 177 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471440 17471463 GAGGTCATAGAGATTCTTGTTCTG 58 NA Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 2 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273316 3 1 5 95 2R 18599850 18599925 ATTTCGGCACTTTCACGTC 59 18599983 18600002 TAGCTTGAGCTCGATGTAGC 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 3 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255 3 1 2 60 2R 20042521 20042539 GACCAGTCGCTGATATCCA 59 20042563 20043342 GATACAAGTCGTTCAGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 2 3 6 122 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281024 20281822 CGTTGCTGTAGTTGTCTCG 59 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700 2 2 3 91 2R 20303188 20303427 GCTTGAACAGTGATCGCAC 59 20303115 20303133 ATACATGGGACTCTTCGGC 59 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867 1 1 2 131 2R 20464512 20464531 GCGAATAACATGACGAAACC 58 20464625 20464688 AAGAGTCAACCGACTTGTG 57 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433 2 1 3 81 2R 20657198 20659260 CTTCGACAATAAGAACCAGAGG 58 20657138 20657158 CTCTCCAAATGCATCAAACAC 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 3 7 8 119 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878689 20878708 ATTCATCCTGGACCGATGAG 59 NA Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 3 1 1 131 2R 10177916 10177935 AAACTGGAATCTGGTTTCCC 58 10177768 10177788 CCGTGAACGTGAATAATATCC 57 NA DesignNoJunction Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299866,FBtr0072475 1 2 6 198 3L 171972 172073 TGTGTTGTGTAATCACACCAC 59 172233 172251 TAGGTCTCAAACTCGCTGC 59 NA InUTR Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 2 3 3 248 3L 224170 224977 ACTACGAAGTGAAGTCGCA 59 225772 225792 CGACGTAGTTTCTTGTTTGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 1 2 10 102 3L 298046 298064 CTGTGAAATCGTCACAGCT 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 3 2 4 126 3L 452934 452955 TGCGATCTTCTATTTCAAGCAC 59 451763 452847 TTTCAGTATGTCGCCTCCA 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 2 4 6 80 3L 982228 982246 CCTGCATCTCTATGGTCTG 57 982288 983865 TCGATCATTTCCTTGATCAGG 58 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 2 3 3 76 3L 1299143 1299161 ACTGTCTACGGCTTCATGG 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 1 2 2 81 3L 1435039 1435057 ACTTGAAAGTGGTGTGCCT 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292 1 1 2 128 3L 1757191 1757327 AACAACCACAGAGGACGAG 59 1757417 1757437 TCCTGATCGTAGTTCCAAGTG 59 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 3 2 2 101 3L 1825128 1825147 CTCTGTCTGCTGCATATTGC 59 1824696 1825064 GTAGTGGAGCCTTTCCTCG 59 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 2 2 2 80 3L 1873975 1874053 TTGTCAAGGAAGTTACATACCG 58 1873916 1873937 CATTGTTTAGATTTGCGGATGG 58 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 1 2 2 111 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965412 1965430 ATATTGACGCACCAACTCC 57 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0089864,FBtr0110856 2 3 4 172 3L 2129195 2129213 CGGAAAGTACATGGTTCGC 59 2126658 2129059 TGTACTTGTAGCCTTCGGT 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 3 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 3 2 4 161 3L 2941472 2941490 ATAAGAATCAGATGCGCCG 58 2941615 2942574 TTTGCTTTCCTGTGTCGAC 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 2 6 15 80 3L 3083798 3085210 GCCACTTATATGGTCACGC 58 3085252 3085272 ATATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 2 3 4 109 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833661 3836031 GTAAATGGAACCACTGCTGG 59 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073175 3 1 2 99 3L 3909034 3909769 CAATGAGGGAAAGACCTCC 57 3908481 3908499 GAACATCTCGGTTAGTCCC 57 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 1 3 3 80 3L 4075935 4076811 TTTCAAGGAGGATGGCCTG 59 4075873 4075892 ATGTCATACTGCTTGTCGGT 59 NA Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 3 1 1 126 3L 4089149 4089167 CCTTGAAGACGTCCAAACC 58 4090081 4090099 CTCCGGTCTCAGGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 ens FBgn0035500 FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 1 5 6 200 3L 4133819 4134470 TTCGACTAATCCAGAAGTGGA 58 4132191 4132209 TTCTCCTCACGGTCTTTGG 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 2 2 5 80 3L 4503453 4503539 AAATGCAGTAATCCCGTCGA 59 4503392 4503412 ATGATAGTTGTACACCTGCGA 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 2 2 2 90 3L 5138226 5138303 CCACAAAGGGTTATGCGAC 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 2 2 2 85 3L 5500640 5500803 AATCATGCAGATCTACCGCA 59 5500574 5500592 TGTAGGTGTTGGGCATCTG 59 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091475 1 2 4 186 3L 5920166 5921341 GGTCACCTTTGTCGATTCC 58 5921729 5921812 GGTTTGGATCTTGTACGTCAC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106 3 6 11 160 3L 7042047 7043665 CTTCTCAATACGCCAACGC 59 7043787 7044353 AGATTCTGTACCCTGGATGAG 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 1 2 2 86 3L 7117435 7117511 GTTATGTCCACTGTCTGCA 57 7117367 7117385 ATACAGCAAGTGGTCATCC 57 NA Drosophila melanogaster 61 melt FBgn0023001 FBtr0302044 1 1 2 80 3L 7134632 7134654 CAATTCGATCAAGTCCTACATGG 59 7134692 7134818 TCATTGGAAACCTCAATGCTG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 3 7 7 149 3L 7811288 7811309 AATAGCAAAGAGATCATCTGCC 58 7810754 7811179 GTCGGCATATTGTGTTACCT 58 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076773,FBtr0076774 3 2 5 138 3L 7895364 7896303 TGGAAACTCATTCTGGGACC 59 7895245 7895263 CATCCTTCTTGCGTATGCC 59 NA Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 1 2 2 60 3L 8399639 8399661 GACTTAGTGGCTTATGTGAACAG 59 8399680 8399699 GGAAATCCTCCAGAACCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 3 2 2 60 3L 8398932 8398954 GCTATCCGAAGTTTAACTATGCC 59 8398972 8398992 GCTCCCAGATTCTGTAGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 2 3 13 163 3L 8627809 8627828 GACAGTATCATGAAGCAGCG 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087 2 1 5 80 3L 8747583 8752548 CTACCGCAGTTATTATGGAACC 59 8752589 8752607 GATGGTCTGTAGGAGCTCG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302085 1 2 5 97 3L 8790238 8790256 ATCTCTGGTTAAGACCGCC 59 8790317 8791229 TGCGACGTAATGATTTGCG 59 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 3 5 5 81 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408555 9410758 GGCATGAATTATCTCGGCC 58 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 1 2 4 179 3L 9707710 9708848 TTTGTGCGAAGAAGCAGTG 59 9708990 9709009 GTCTTCTCAGTCGATGTGGT 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 2 4 12 114 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 1 3 3 82 3L 9889481 9889564 ATGAGGCTACTCCCATTCG 59 9889417 9889438 GCTCTTGCAGATTAACAAACAG 58 NA Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 3 3 3 89 3L 9888967 9889066 ATTGCTTCGGATCATGGTG 58 9888896 9888914 GAAATAGTAGGCGGACCTG 57 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076289 1 1 5 191 3L 10580769 10580787 TCCAAATCTACGCTTCCAG 57 10582610 10583231 TAGGTTTCTACACCAGCCA 57 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 2 1 1 201 3L 10883137 10883155 AAGCCAGCAAAGATGTTCC 58 10883477 10883495 CGTGGTTTCCTCCAATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 3 3 4 127 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032745 11032763 TCGAACGGATTGTAGTTGC 58 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 2 3 3 80 3L 11064071 11064156 CAGGTGCTGAGAAAGAATTCG 59 11064195 11064216 GCGTTCGGTTAGAGAAATTCTC 59 NA InUTR Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 1 5 5 115 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 3 3 3 93 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730944 11730962 TCGGTCACGTACTTCAGTG 59 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 1 3 4 80 3L 11777435 11777514 TTCACTTGCGATATTGATTCGG 59 11777376 11777394 GGTACCCTTGACTTGTCCC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 3 2 6 66 3L 11811197 11811215 TGGTACACAGTCGACAAGG 59 11810714 11810733 TCATATCATCGTTCACGTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 3 2 3 104 3L 12743828 12744414 ACTCGTCGACAGATTCATCC 59 12744481 12744499 CCAGGACCTCTTGCTTCTC 59 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 1 3 3 132 3L 12820166 12820184 ATCCTGTTCGTCTATGCCG 59 12819718 12820072 CTTTGGAAACCAAGTAGGTGG 59 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0300701 3 1 2 80 3L 13432953 13433045 GAACCTGTACGAGATCGCT 59 13432891 13432912 ATACGCATTGGAGTAGATGGAG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 3 2 4 128 3L 15301824 15301842 AGAGTTCCCTTTGTACCGA 58 15301932 15302037 AAGAAATACGGGTATACCCAC 57 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 2 4 4 66 3L 16346789 16346807 CATCATCAACTTCACCCGG 58 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 3 2 2 83 3L 16652384 16652402 GGGTGTTCTACTACTGCGG 59 16644625 16652337 GCAATTGGAATCTAGGCCG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 1 4 4 86 3L 16782611 16782629 GACGAGGGTATCGAGTTCC 59 16782405 16782561 GAGGACGGCATCATACTCC 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075292 3 1 2 83 3L 17014629 17014807 AGTACACTATGCTGGACAAGG 59 17014566 17014584 ACGATTCCGACTCCATCAC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075005 3 1 12 148 3L 19298642 19298847 GTATTACTCGGGCTTACATGC 59 19298514 19298532 AGTACTGTTTGTGCAACCG 58 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 1 4 4 80 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074916 2 1 2 121 3L 19912610 19913261 CTCCAAAGATGTGGAGCAG 58 19912507 19912525 CATTCATAACTCCCACGGC 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302712 2 2 5 169 3L 20149916 20149934 CTACATCCGCGACCTTAGG 59 20149084 20149783 CTCGGAACTGGATACCTCG 59 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179 2 1 2 132 3L 20347969 20347989 CAGGTGATCCATTACTCTGTG 58 20348082 20348418 CTTCGTAGGTGTATGTGCTG 58 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 1 4 4 80 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508475 20508553 AACCATAGCCCGAATCCAG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0273212,FBtr0273213 1 2 4 100 3L 21207469 21208483 AAAGACAGACATCGTCAGC 57 21208547 21208565 GAATTGGGTCCCAAACTGG 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678 1 2 3 166 3L 21321362 21322909 TGGGCAAGGTCATAATGCT 59 21325732 21325750 CCAGATTTGCAGCTTGACG 59 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 2 3 3 182 3L 21428964 21428984 CGTTTGTGATAAGACCTTCCG 59 21429191 21429209 TGCTTCTTGCAGATGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058 1 1 2 80 3L 21567368 21567855 ACAGAATGGGATTCCTGGAG 59 21567896 21567916 AGAAACTTTCCGAGTTTGCAG 59 NA Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078461 1 1 2 116 3L 21687662 21697660 AACAATGGAGGTGATCGGG 59 21687564 21687582 TGCGGGAGGATAATAGCAG 59 NA Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 1 1 1 70 3L 22639475 22639496 TGTCTCCATCATATTTGTCCAC 58 22639613 22639631 ACGTCGGACTGAAATTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 3 2 2 82 3R 468365 468479 CCCAACTATCTAAACTTCCTTGC 59 468518 468539 CAGTACTGCAGATACTTCAGGT 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 10 10 92 3R 561271 561375 CGATCTGCATGTGAAATACGA 59 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 1 2 2 119 3R 1062886 1062962 ATGATGACATGAGCAGCGT 59 1062785 1062803 TGTACTGGCTTTGACCCTG 59 NA Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 3 2 2 113 3R 1294732 1294751 CCTGCTAGTTCGGTCTACTG 59 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733 1 2 3 117 3R 1472925 1474226 AGTCGGAGACTATGTTTACGT 58 1472828 1472847 GTAGAAGCACATGACCTTCG 58 NA Drosophila melanogaster 61 CG1239 FBgn0037368 FBtr0078720 1 1 1 91 3R 1560109 1560127 GGAACCTCAGTCCTTCGAC 59 1560248 1560269 GATCAGGTCGGAATTTAATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 1 2 12 92 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587158 1587375 ACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 2 2 2 94 3R 1661584 1661603 CTCACGCAATCCAATAACCT 58 1661657 1661741 CCAAACAAATTATCATAGCCGC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 1 1 1 62 3R 2167826 2167844 TAATACACATCGGACCGCA 58 2168070 2168088 AATGTGCTGCTAAATGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 1 2 2 80 3R 2467275 2467352 AAGTTATGCTTGGAAACTGTCC 59 2467390 2467411 CAGATGCTTTCTGTGTAATCCT 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0113199 3 1 9 111 3R 2921511 2922022 CATCATCAGTCGCACAGTG 59 2921418 2921437 TACTGGTACTGCTATGACGG 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 3 3 4 89 3R 3586918 3586936 ACACGCAAAGTAGTTGGGA 59 3586987 3587739 ATTCCTACAACTTCCTTGTGC 58 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 1 2 4 80 3R 3848353 3848373 GCAAGAAACTAATCATCGCAC 58 3847658 3848184 CTATTGGGTTGCAGATGCTC 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 2 2 4 80 3R 4612641 4618840 CAAGTTACACCTGAGATAACCC 58 4612582 4612601 CTCGAGCGCTGATTTATGTG 59 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 2 2 5 102 3R 4858905 4858923 GATCAAGAAGCGCTTTGGA 58 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 2 2 2 122 3R 5192793 5192813 CAGTGGCTATCCTAAGATTGG 58 5192897 5192979 GCACCACAACTTTCTTTCC 57 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043 1 1 3 187 3R 5284473 5284850 TCCAATACTCTACTCGTATTGGC 59 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 2 2 2 69 3R 5341137 5341155 AAGTCTTCCCTAGTCCGGA 59 5341035 5341053 CTCACTACTGTCTCCAGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082207,FBtr0082211,FBtr0082212,FBtr0082210 2 6 9 80 3R 5842064 5842082 ATTCGGATGAGAAGAACGC 58 5841639 5842021 CCTTGGAACTAGATTTGGGT 57 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 3 3 6 133 3R 5930725 5930801 TTCGAATCAAGATCGCTGG 58 5930610 5930630 CGACAGATGATACTCCAACAG 58 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 3 3 8 106 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359638 6359656 CTACCGAGGAAGACTGAGG 58 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 3 4 4 87 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525811 6525958 CTCGTTCAGATCGTTTATCTTATCG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 1 6 7 179 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 3 6 7 186 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692400 6692535 TGTTTGTTGTAGCAACCTGTG 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0301826 2 1 4 94 3R 7614036 7614191 CCATGATGATCGAGAGTTATTTGG 59 7614244 7614262 TGATATGTCTAGCTGCGGC 59 NA Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041 2 1 2 80 3R 7717451 7717471 TATGTATTTGGCAGGGTCTCC 59 7717510 7717599 ACTCAACTTCAAAGGTCTAAGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 3 3 15 194 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814460 7814479 CGATTGCTGGAAGAAGATGG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 3 3 15 194 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814460 7814479 CGATTGCTGGAAGAAGATGG 59 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082710 3 1 2 103 3R 8898260 8898391 AGCAGATTGCATGATATAGCC 58 8898455 8898474 GCCAATTCACAGAATTCCGT 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 3 6 6 80 3R 9204502 9204739 TGCCCTACATCTACAATCCT 58 9204441 9204460 GGTCCAGTTCACTTACATCG 58 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 2 8 8 82 3R 9487884 9487905 AATTCGAAGACTATCGTGATGC 59 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 2 2 5 114 3R 9522482 9522559 TTTCCGGATAGCTTTCACCA 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 1 2 5 112 3R 9522481 9522557 TCCGGATAGCTTTCACCAC 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 3 3 3 86 3R 10126663 10126683 GAAATGCATGAACGACTTCCT 59 10126731 10126958 CTGACCAGGTCCTTAGAGC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0110961 3 1 3 102 3R 11015638 11015731 CAGTCATGGTCATAGTCATGC 58 11015795 11015813 CTGATGGGTTATTCCGCCA 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 1 5 8 101 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 1 2 2 234 3R 11789812 11789897 AAGAAGAGATCCGCAAAGC 58 11790095 11790113 TTCGACGGACCTTCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 1 2 2 80 3R 11798315 11798425 GCAAGAAGTATTTGGCCCAC 59 11798254 11798275 CATACTGCAGGAAGTGAATGAG 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 1 2 2 94 3R 12006910 12010690 TAATTGCGCTCGTTTGCAG 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 3 2 2 96 3R 12006908 12010688 ACTAATTGCGCTCGTTTGC 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 1 4 6 80 3R 12458425 12458444 GGAGTAGTCCATCTGATCCA 58 12458487 12461282 GTTCTCAGCATTCTCCTGC 58 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 1 2 3 88 3R 13219599 13219617 CCCTAAGATGCAAGGAGGG 59 13219468 13219549 AGGATCCATCTTCTTCACCTG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 3 4 7 80 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834636 13834654 TTCGTGTTACTCTTGGCGA 59 NA Nonspecific Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 1 2 2 79 3R 14112829 14112847 GAAACTTAGCTACGGACCG 58 14112707 14112725 GAAAGGTGCCATCGTTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 1 3 14 90 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0112924 1 1 4 93 3R 14845036 14845054 GAATCGGAGGATGACGAGG 59 14845109 14846659 GTTGATACCTGTCCACAAAGG 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 2 2 3 101 3R 15464753 15464771 AAGGACCAGATCTGGTTCG 59 15464141 15464633 TCCTGGAATCTCCTTCATGG 58 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 1 2 5 150 3R 15842347 15842365 ATTAAGGAGCGAACGGGAC 59 15842475 15842565 GTCAAGAGATTGCCTATTCATCC 59 NA InUTR Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302672 1 1 8 137 3R 16144744 16145299 ATAAGGCAACTGCTGATGC 58 16145400 16145418 CCAGCACTATAACTGCAGG 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0100457 1 2 5 163 3R 16365076 16365137 TACTCAAAGCGTCAAGAGC 57 16363174 16364949 CCAAAGTCACCATTTCCCA 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 2 3 5 80 3R 16367452 16367471 CTTACTACGAGGAGAAGGGT 58 16367265 16367412 TTTGTTCGGACATTATCCTGTC 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 2 3 5 80 3R 16367271 16367416 CGAAGACAGGATAATGTCCG 58 16367210 16367229 TCTTCGTTGAACTTTAGGGC 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 1 5 5 115 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396900 16396918 GACTCCACGCTGTTAATGC 59 NA InUTR Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510 1 1 9 80 3R 16787949 16787967 GACTCTTATCGAGTCGCCA 59 16788009 16789458 CTTGCGTCTTGACTTGTACTG 59 NA Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 1 2 2 80 3R 16940760 16940778 TTCATAGAAACCTCGGCCC 59 16940819 16940989 CACAATGCGATAGATCTCTGTG 59 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 2 2 2 83 3R 17096238 17096314 CGATCGTCTCACAAGATAACC 58 17096359 17096377 ACGTTCCTGTTCGATTTCG 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 3 3 3 95 3R 17109864 17109882 CTGATGTGCAAGTTTGTGC 58 17106316 17109805 GATGGCAATGAACCTGTCC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084064 2 1 22 80 3R 17200833 17200853 AACAGTCCCAGAACTACAGTG 59 17189598 17200793 TGATCTTGACTTGAGCCTCTG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084072 2 1 22 92 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17188582 17200791 GTTTGCGATCTTGAGCCTC 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 1 2 5 80 3R 17350302 17350320 GAGACTATACTCGCACCGG 59 17350361 17351259 CCAAATAATAACGATTGGCGGA 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 2 4 4 86 3R 17404341 17404359 AATGAGAGCTGCATCTCCT 58 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 2 2 5 120 3R 17897747 17900174 ATATGCTGATCATAGCGTAGG 57 17900256 17900274 TATCTCAATGAAACCCGCC 57 NA Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 3 2 2 86 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198003 18198021 GTTCTTCTTTCCGACCTGC 58 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299516 1 1 2 167 3R 18239848 18239866 GCTGGACGGTAATTTGCTG 59 18239997 18240280 AACTGCTCTTCAACAGCCA 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 3 3 3 64 3R 18288987 18289008 GTAATGAAGTCGTATTTGTCGG 57 18289086 18289107 ATCACGATCTTGTCGTTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 2 3 3 80 3R 18537937 18538031 AAGGAGACTATCACGGTCG 58 18537875 18537894 CTCAATGCGTCCGATATAGG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088 3 1 2 171 3R 19076470 19076490 ACGGTCATCGTTAAATAGGTC 58 19076254 19076338 ATTGTTCTGAATGCTTGGCA 58 NA Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 2 3 3 86 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590549 TTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 3 2 3 165 3R 19762736 19763157 TACCATCTGCTTGCCTCAG 59 19762254 19762272 CGATATCCTTCTCGGAGGC 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301368 1 1 6 89 3R 20079841 20080140 GCGGTACTTGAATAAATCCGA 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324 3 1 2 83 3R 20175944 20177780 GCACTGATCGAAGAATCCAG 58 20177826 20177844 TATGTTGGACGGTCCAGTG 59 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 3 2 3 104 3R 20476218 20476236 AAGGGTAAACTTCTGCCCT 58 20476304 20476382 CTGGGATATGGTAGCCTGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100638,FBtr0084685,FBtr0100627,FBtr0100636,FBtr0100637 3 5 18 142 3R 20517648 20519504 TCAAGACGTCACCAGACAC 59 20520680 20520700 CTTCAGCTTGGAGAAACACAG 59 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084697 2 1 2 81 3R 20618910 20618928 CCTTGATGAACGCTTCCAC 59 20618973 20619116 GATTCCCGTGTGAGATCGT 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 3 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 2 3 3 92 3R 21133345 21133423 ATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 3 2 7 148 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535099 21535117 AATTGGATCCGCATTTCGC 59 NA Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 2 2 2 60 3R 21637244 21637264 CAAAGTCTTCGACAAAGATGG 57 21637281 21637304 CATTATCTGACGGAACTCATTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 3 3 3 96 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717749 21718181 ACTTCGTTGCAATGTCTCG 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 1 4 5 130 3R 21870341 21871201 TCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 3 2 9 85 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699705 22699793 TTGTAGCCCGTATATGCTACG 59 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 1 2 2 80 3R 22769168 22769189 CAAACCTGGTCTCAACTATCTG 58 22769228 22769310 ATGAATTTCATGAAGGCCCTG 59 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 1 5 5 124 3R 23101498 23102023 ACATGACGGTATTTGGGCT 59 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0085308 3 2 3 98 3R 24518604 24518622 ATCTACAAGTGCATCAGCC 57 24518681 24518867 GATGTTGTTACTGAAGTTCACG 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 2 3 6 149 3R 24637861 24638120 GTTATGGAAAGTCCAGGTCG 58 24638450 24638468 CATGACCACTTGCTCTTCG 58 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 1 2 2 81 3R 24671712 24678608 ATACGGAGTTGCCATCCAC 59 24678653 24678671 CACAATGTCCACGGAATCG 59 NA Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 1 3 3 102 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951601 24951619 AGATGAGGCGACTATGCAG 59 NA Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 3 3 3 144 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951643 24951661 CCGATTTGGTGCGAATCTG 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 1 2 3 133 3R 25574564 25574582 TATAACACTCGTTGTGGCG 58 25574374 25574392 AATCATCTTCAGGGTGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0085505 3 1 2 80 3R 25771021 25771096 CAACCAAGAATTGCTCGGG 59 25771136 25771158 CTGTATCACAGTTATGCTTAGCC 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 3 4 5 84 3R 25857054 25857152 GAGCCATCTACAGATTCTTGC 58 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 2 3 4 88 3R 26032435 26033824 TGAACACAAAGTCGACACC 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 1 10 12 113 3R 26398693 26398711 TGGTGGAGAAGAACTCGTC 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 8 13 154 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419562 26420548 AGTAGAGTTTCTGGTCGGT 57 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 2 2 2 120 3R 26705167 26705185 CACAGAGCCCTATGTCGAG 59 26704954 26705084 CTTGTTGGTGGACTTTGAGG 59 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 1 2 2 80 3R 26926451 26926528 AAATACAGGCAATTGAGACGG 59 26926391 26926413 GCATAATACTTTCGAAGAGGGTG 59 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 1 3 3 80 3R 27027474 27027493 GACACTGGCTTGGATTACTC 58 27027533 27027614 GGGATGGATGTTAAAGTCTTCG 59 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085841 1 1 4 135 3R 27574767 27574941 AATATCAGAAACGCACTCCCA 59 27575038 27575056 GTTCCTCGAGTGCTAGACC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 3 2 4 98 3R 12571212 12571232 ACCAATATGCTTCGGTAATCG 58 12570413 12570433 CCAATGGGAAGTGATAATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 2 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103363 106347 CGAGTTAAGCCCATCTTAGG 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 1 4 8 80 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162747 162839 CAGATGAACCCAACAAGTCAC 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 2 5 6 199 4 323146 325653 TTATAGTCTTCGGGCTGCT 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089128 3 1 2 199 4 399187 399360 GCGTACACATACATCGAAGG 58 398814 399026 TAAACTGGGATGAGGCTGAG 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100395,FBtr0100396 3 2 4 81 4 728288 731554 GATGATGAATGTCACAGTGGAG 59 731596 731614 TTTGCCGTGTTGAATCTGG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 3 2 9 103 4 1065794 1065815 TCTAGCACTACTCTTGAAGACG 59 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 3 4 4 106 U 1179112 1179131 GCCATTAATAACGCAATGGA 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 1 4 4 103 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449554 3449572 TTGATACTGATCTCCCGCT 57 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 3 2 4 63 X 227609 227627 CGGATCAGGAAGCTATCCA 58 211928 211946 ATCACCATGTCGCTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 2 2 8 84 X 550805 551138 ATAACCTGCAAGAGAAAGCC 58 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 3 3 3 107 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237881 1237900 AAGCCCAAGTTCTCGTAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 1 2 2 92 X 1758265 1758285 GAATATTCAAGCAACAGCGGT 59 1758131 1758217 GGTTTAGTAAATATGCTGAAGTCCC 60 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 2 4 5 88 X 1787492 1787510 CATATGAGGGCCTGTACGG 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 1 3 3 103 X 2236289 2236307 TGAAACACAATCGTCCCAG 58 2236374 2236460 CTCCGCCAGAATATTCCAG 57 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 1 3 3 80 X 2243029 2243047 AGTAAGCTCTTGTCCCTCG 58 2242900 2242985 ACTAGCATCCACTGGACTG 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 3 4 8 81 X 2386428 2386447 ATAGTAATGATCGCAGACCG 57 2384863 2386384 CCAACGTCGTTATTCTCCT 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 2 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632 2 1 3 81 X 3759462 3760543 TGAGTCTTCCACCCATTCC 59 3759399 3759419 CCATAGTAGTTGAATCGCTCG 58 NA Drosophila melanogaster 61 cib FBgn0026084 FBtr0070640 1 1 3 101 X 4003951 4003969 AACAGTCGATCTTCGAGGG 59 4004032 4004204 CTCCTTCTCCTTCCTTATCGG 59 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 1 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015955 4016107 TCTAGCTGTCGAGTAGTCGT 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 1 5 5 113 X 4962727 4962745 AATCTCTGCGAGAAGAGCT 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 2 5 5 113 X 4962727 4962745 AATCTCTGCGAGAAGAGCT 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0301914 1 3 5 127 X 4961267 4962173 CACTCATCCAAAGCTTGGG 58 4962264 4962282 ATCGATGTTGCGAATTCGG 59 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850 2 1 3 93 X 5559763 5559781 TTTCTCCTGTCCAAACCGA 58 5559505 5559646 GGTAATCGGGAATCCAAGC 58 NA InUTR Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 1 2 2 94 X 5808679 5808697 TGAGAACTTCACCTCGGTG 59 5808426 5808621 CACCGTAGTACCTCTTGCC 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827 1 1 2 119 X 5808803 5810305 CACTTTGAAGAATATGGCCGA 58 5808704 5808722 ATCATCTCGAGTCCTTCGC 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827 3 1 2 120 X 5808804 5810305 CACTTTGAAGAATATGGCCG 57 5808703 5808721 GATCATCTCGAGTCCTTCG 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 1 4 6 123 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091672,FBtr0091673 1 3 3 60 X 6772497 6772516 GAGCTCTACAAGGCAAATCG 59 6772600 6772619 TGTAGTTGCGATCGTACTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300760 1 1 2 188 X 6927460 6959602 CTGTTCAGCAGAGTTGTGC 59 6927224 6927244 CTCACCCAAATAATCATCGCT 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 2 4 21 81 X 6986732 6986756 GTCCTACTATAACTTTAAGATGGCG 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 2 2 3 166 X 7764353 7764371 AGTTACGGAACAAGCTACG 57 7764007 7764223 TTCGGGTTTATTGTCCTGG 57 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 1 6 6 115 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 2 6 6 116 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944208 7944226 CTCGAACTGCTATCACTCG 57 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 3 3 3 115 X 8140670 8140688 TATCCGGATATTCCCGGTG 58 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 3 4 6 82 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442550 8444127 CTTCATTCATGCCTGTATCGC 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850 3 1 2 122 X 9467350 9467446 CCTCATCCATCTCTACAGCG 59 9467247 9467265 TCCAGAGCATAGAAGAGCG 59 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367 2 1 2 145 X 9502314 9502462 ACCAAACTTGAGCTAAAGCG 59 9502188 9502208 TATTCATTCGGCGAGATCTCC 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633 3 1 8 101 X 10201997 10202018 CATGCAAATACTACCAATGCAG 58 10173216 10201938 TTCCATCATCTGTTTAACGTGG 59 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0112978 3 1 2 186 X 10812537 10813873 TTGAGTACCAGCAGGTAACC 59 10814022 10814040 TAGTGTCCCTGCATCAAGC 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 3 4 4 105 X 11055658 11055676 CAACAACTCGATCGACGAG 58 11055743 11055827 CATGTAGTCCGTCTTTGTGAC 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 2 2 4 80 X 11329463 11329481 GCGAATCTGGATGATTCGG 58 11328833 11329419 TATTGGCGTGGGATACTCC 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 2 6 6 151 X 11688899 11688918 AAGTGCATTGACGTGTACAC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 3 2 10 91 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848298 11856053 ACGTTGATTGAGTTCGAATCC 59 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 2 2 2 93 X 11888947 11889034 ACCTATAAGATTGGAGCACTGG 59 11888875 11888893 ATTGTCCACTATCCGTGCA 59 NA Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073669 3 1 2 118 X 12355851 12355870 TGCTAAAGGTTCTACTGGTG 57 12355696 12355771 GATATGAGATGTGCAGTCGT 57 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 3 2 6 91 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534865 12537916 GTGTCGTTCAGCTGATCTG 58 NA Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559 2 1 2 119 X 13308917 13309083 AAGACACGCTAAAGTCAGAC 58 13309165 13309183 CTTCGGTGACCATTTCTGG 58 NA Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 2 1 1 121 X 13450711 13450729 GATCCCATGGAGTCCTTGG 59 13450918 13450938 GGATTCACATTAAGGCCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 2 2 10 80 X 13490774 13494114 TGAAGAGTACACAGGAGAGG 58 13490713 13490731 TTCAGCTGATCATCGAGGT 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 1 5 10 105 X 13493486 13494113 GAAGAGTACACCAGCTCCG 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 2 2 4 80 X 13591267 13600190 TATGTGAATGGCTTCCTTGG 58 13600231 13600251 GGTCTTCTCATCCGTATTCAC 58 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 3 4 4 81 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301046 3 1 4 82 X 13731940 13731958 GGGATCGATGGGAAATCAG 57 13731782 13731894 CGAGATCACTGAGATCGTC 57 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 1 2 3 112 X 14474872 14475008 ATCACCGATTCGACATGCT 59 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA InUTR Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 3 1 2 132 X 14771780 14771799 GAAAGAGAACAACAGTCGGC 59 14771335 14771582 TACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 2 1 1 60 X 15627747 15627767 AGTATACACTGCAGTAAGCCA 59 15627550 15627568 GAATGCTATTCGTGGCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0074102,FBtr0113440 2 2 2 127 X 15730228 15730322 TCTTAATCTATGAGGGCATGAC 57 15730410 15730428 TTTCGACAACTTGCTGAGG 58 NA InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 3 3 3 106 X 16256034 16256052 AATAATCGCGCTGGAAACC 59 16257425 16257443 TTAGCAAGTGCATTAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 2 1 1 61 X 16506699 16506717 CAAGCAATGCTTGAAGGCT 59 16507574 16507592 TGATGTCGCGATGAATGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 2 2 2 60 X 16546040 16546123 CAACAGTCAAATTACCATACGG 57 16546142 16546162 GTGGAATACCTGCAATTTGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 3 3 5 81 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717634 TCGATTTAGGCCAGTCACTG 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0074386 3 1 4 148 X 17019041 17020045 ATACACATAGGTGACACTACGA 58 17020370 17020388 ATCAGTAGGCGAGAGTCCT 59 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 2 4 4 294 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198373 17198391 AGCCATTTGAAGTGCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 1 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 1 3 3 80 X 17542201 17542219 CTCAATTACCGAATCGCCA 58 17541816 17542158 GTACACGCAAATAAGACCAC 57 NA Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 1 1 1 60 X 17744853 17744872 CCTCATTGAAACGTACTCCA 57 17744955 17744973 TAGGCACGGATTCAAGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 3 3 4 178 X 17767427 17771467 GAATAAACAGAAACTGTCCGC 58 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 3 2 6 80 X 17784698 17790570 TTCACCCAGGCATATAGCA 58 17790614 17790632 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089657,FBtr0089662,FBtr0089663 1 4 8 107 X 17847372 17870394 GATGGTTACGGGTCTTTGC 58 17847283 17847301 ATGATCGTGAGGAATGGGT 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 1 1 7 80 X 18006639 18006663 GACAGGATTAATAAATTGGAGGACC 59 18000953 18006604 GAGATCGTTGATCTCAACATCC 59 NA Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 2 2 2 80 X 18055281 18055302 AGTTGAAACAGGATACCATCGA 59 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 1 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 1 2 4 112 X 19040166 19044852 GAGGACATGATTGTGCCAG 58 19040072 19040090 GAGACGCTCTTATAGCGCT 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 3 2 4 114 X 19040166 19044852 GAGGACATGATTGTGCCAG 58 19040070 19040088 TGGAGACGCTCTTATAGCG 59 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 3 2 3 117 X 19157975 19163294 GACCTGCATTCCACTACCA 59 19163375 19163393 TTCTACTCGTCCTGTGCAG 59 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 1 2 3 116 X 19157976 19163295 ACCTGCATTCCACTACCAC 59 19163375 19163393 TTCTACTCGTCCTGTGCAG 59 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 3 2 5 80 X 19455820 19456735 AGTTCATCCAGATTGAGACC 57 19455759 19455779 GGGTAAATTCCAGATCAAAGC 57 NA Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 1 2 2 133 X 19512541 19512559 CTAATCAGCTGTTCCGCTC 58 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 2 2 2 170 X 20540303 20540321 AAATTCGACAGATTCCGCG 59 20540455 20540537 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 1 5 5 80 X 20644230 20644250 AACGCTAATATACAGGGTGGT 59 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 2 5 5 80 X 20644230 20644249 ACGCTAATATACAGGGTGGT 58 20643791 20644187 ACGCACTAACCTAAATCGC 58 NA Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 1 1 1 95 X 21028060 21028078 CAGAACGATTAACGCTCCT 57 21027587 21027605 GTACCGCTCACGTAGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0070095 3 1 2 93 X 375592 375650 CAGGAAGTAGGAGTAGGACC 58 375518 375536 TCAGAGCTGAGAACCATGG 59 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 3 4 4 97 XHet 9417 9492 GAGCTGGCATGACAATACC 58 9551 9571 GTCGTGCATAACACAAATGAG 58 NA Drosophila melanogaster 61 tRNA:N5:42Af FBgn0011936 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30316 FBgn0050316 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30227 FBgn0050227 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31494 FBgn0051494 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31579 FBgn0051579 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:92Ba FBgn0012003 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U2134b FBgn0260002 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1135d FBgn0083009 FBtr0113572 1 1 1 77 X 17040201 17040219 ATTCCATCCCAGCTAAGGC 59 17040142 17040163 GCTTAATCTTCAAGCACTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 2 1 1 81 X 21027661 21028075 AACGATTAACGCTCCTCTG 57 21027598 21027616 GTAGTAGGCTCCATTGTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 3 1 1 60 X 20911184 20911427 CAAGTTTCTCGAACTGGGT 57 20911142 20911162 GTTGAAGCTGTAGAAGTGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1532 FBgn0031143 FBtr0077268 2 1 1 89 X 20898827 20898845 CAATGGTGGGTTATGGACC 58 20898040 20898776 AATCATTGCCCATTTCGTAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG42583 FBgn0260873 FBtr0301570 1 1 1 60 X 20034053 20034074 CCTCCATGAGAAACTAGAGGAC 59 20034090 20034113 CTCATTCATTATCTCATCCTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33932 FBgn0066303 FBtr0091936 1 1 1 80 X 19638700 19638792 AAGACAGACTTTAAGGCCCA 59 19638833 19638853 CATGCAATGCAGAAAGATCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074811 3 1 2 272 X 19636918 19637490 GACATCGCAAACAAATCATCAC 59 19636667 19636685 TGTGGTAACGGGATGACTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14219 FBgn0031033 FBtr0074769 1 1 1 80 X 19482997 19483018 CTACGGTCATGACTATATGGTG 58 19482880 19482958 TAGAATGAGTTGATCCACGTC 57 NA Drosophila melanogaster 61 CG32533 FBgn0052533 FBtr0074786 3 1 1 61 X 19370372 19370458 GTTGCTCTGTTACCAGTCG 58 19370329 19370347 GGCGGATGCAGTTAATCAG 59 NA DesignRelaxed Drosophila melanogaster 61 Muc18B FBgn0031000 FBtr0074673 3 1 1 60 X 19110237 19110256 ATCAGATACTGATGCTCCCA 58 19110278 19110297 CTCATCGGTACTGGTCTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14193 FBgn0030994 FBtr0074670 3 1 1 60 X 19084340 19084358 AGAACACAGGTGGTTTCCC 59 19084381 19084400 TCCTTCTGCTGATCGTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34330 FBgn0085359 FBtr0112532 3 1 1 75 X 18962655 18962673 TCCAAGTGAAACAGGAGTG 57 18962598 18962616 CTAATCGACACAGCCAGTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG34330 FBgn0085359 FBtr0112532 2 1 1 74 X 18962653 18962672 CCAAGTGAAACAGGAGTGAG 58 18962598 18962616 CTAATCGACACAGCCAGTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722,FBtr0112723 2 2 2 255 X 18738062 18738538 AAGATGCAGCAAATGGACG 59 18738757 18738775 TAATGGTAGCCTCCACGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659,FBtr0074656,FBtr0074658,FBtr0074657 1 4 4 60 X 18689042 18689060 AAGGTCGATGAGTCCTCAG 58 18689000 18689018 AGTTCTCCTTCGATTCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18259 FBgn0030956 FBtr0074661 2 1 1 62 X 18677364 18677382 GATTATAGAGCGGAAGCGC 58 18677258 18677339 TTCGCATTGAACTTTCTGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cyp308a1 FBgn0030949 FBtr0074604 3 1 1 80 X 18605213 18605295 TTCAGGCCATTCATTTAGATCC 58 18605334 18605354 TTGGTGGCTGATTTAGAAAGC 59 NA Drosophila melanogaster 61 CG6461 FBgn0030932 FBtr0074622 2 1 1 80 X 18400495 18400513 AAGGCAATGTACGTTTGCT 58 18400371 18400452 GGTACTTCATGATCACAGCT 57 NA Drosophila melanogaster 61 CG15056 FBgn0030918 FBtr0074560 3 1 1 81 X 18309563 18309655 CTCGTTCAGCGTAATTAGCC 59 18309697 18309717 AAAGCTAATGCGAGACTTCAG 58 NA Drosophila melanogaster 61 CG12672 FBgn0030886 FBtr0074539 1 1 1 60 X 17900149 17900167 TGAGAAGTACCCATCACCA 57 17900107 17900127 CGTATAGGTGAGGCTTAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836,FBtr0302835,FBtr0302837,FBtr0302834,FBtr0302833 1 5 5 92 X 17640916 17641005 GTCATGTCCACCATAGATCTC 57 17641059 17641077 TACCTGGAAACAGTGACGA 58 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302377,FBtr0302376,FBtr0074386 2 4 4 76 X 17028863 17028884 TACTCTGATAAATCGGAGAGGA 57 17028986 17029006 AGATGATCCAGATACACCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074381 3 1 2 126 X 16973031 16973108 ATTTGGCAAAGCTATGCGA 58 16973198 16973216 ATGGTCAGGTATTTGCTGC 58 NA Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096,FBtr0110990 3 2 2 84 X 16847293 16847376 TACCTTAAGAATTCTATCACCTCGG 60 16847417 16847436 CGCTTACGAAGATCAAACGT 59 NA Drosophila melanogaster 61 CG32568 FBgn0052568 FBtr0301043 2 1 1 104 X 16635883 16635948 GCAATAAGATAGCCGAGCAC 59 16636014 16636033 CGTGTGGATATACAATGGGC 58 NA Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 1 2 2 80 X 16576146 16576244 TCCACGATATCCTGTATCTCG 58 16576086 16576104 AGTAGTTCCGGATGTCCTC 58 NA Drosophila melanogaster 61 CG42512 FBgn0260238 FBtr0300651 2 1 1 205 X 16545857 16545875 AAGATGGACCTGGACTGAC 58 16546043 16546124 GCCGTATGGTAATTTGACTG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 1 2 2 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 1 2 2 80 X 15875825 15875843 GAAGGAACCGCATTTGCTC 59 15875697 15875783 TCCGAGTAGCATATCTTCCAG 58 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161,FBtr0074160,FBtr0074159 1 3 3 80 X 15829503 15829521 AGAATGTTCTGTACGGTCG 57 15829367 15829461 TAATACGTGCTCTAGAACCCT 58 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301233,FBtr0301232 3 2 2 81 X 15818122 15818143 TTCGCTACAGAATTCACTAGCT 59 15818181 15818261 GTACGATGGATCGTTATATGTGG 59 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 1 3 3 86 X 15744638 15744656 CACTGGGACTTCCATTAGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 CG42300 FBgn0259196 FBtr0299680 3 1 1 80 X 15449880 15449965 AAATGGCAGAAGTCGTGTC 58 15449818 15449836 ACTTCTCGATGGTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073968 3 1 2 119 X 14960327 14960410 TTACAATGCAAGCGATCTGG 59 14960227 14960245 CCACGTAGACCGTCATCTC 59 NA InUTR Drosophila melanogaster 61 CG14406 FBgn0030595 FBtr0073977 1 1 1 83 X 14804713 14804731 CAACTGAAACGGGAACTGC 59 14804342 14804668 CACTTAGATCCGATGGATCGT 59 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 3 1 2 133 X 14771781 14771800 GGAAAGAGAACAACAGTCGG 58 14771335 14771582 TACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 CG32595 FBgn0052595 FBtr0073941 1 1 1 80 X 14612774 14612794 ACGACAATATGTCCGATATCC 57 14612655 14612732 CATGGATGGATTCCAGGTC 57 NA Drosophila melanogaster 61 CG32603 FBgn0052603 FBtr0073894 2 1 1 129 X 14078622 14078745 CAGCAACATGAAATTCTTCGC 59 14078836 14078854 GTAGGACTCGTAGCTGGTG 59 NA InUTR Drosophila melanogaster 61 Ste:CG33241 FBgn0053241 FBtr0300090 3 1 1 110 X 13948594 13948612 TCTGATACACAGCTGGACG 59 13948442 13948520 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11103 FBgn0030522 FBtr0100218 2 1 1 60 X 13676951 13676969 CGGTAATCGCACCTTTCTG 59 13676992 13677011 AAAGTAGTGATCCGTGTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12177 FBgn0030510 FBtr0073846 1 1 1 80 X 13572776 13572897 TATACACATTAACTGGCGCCT 59 13572716 13572735 TGGTTGAGCATGGTAATTGC 59 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290203 1 1 3 186 X 13152216 13152427 GTACTACGACGGTGATTCG 57 13152048 13152066 TGCATCTTTAGCATGTCCA 57 NA InUTR Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 2 4 4 176 X 13098182 13100761 TCAAATAGAAGTGCCCGGT 59 13098024 13098042 TTGTTAATGCGCAACAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32645 FBgn0052645 FBtr0073725 2 1 1 89 X 13045863 13045881 ACCATGGATCACATCACCT 58 13045934 13046135 GAGCATGCACATCTCATCG 59 NA Drosophila melanogaster 61 CG4330 FBgn0030452 FBtr0073724 3 1 1 291 X 13025878 13025896 TACGATCCATCCACCTCCT 59 13027111 13027129 TGTCCGTATCAATCACCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073668,FBtr0073669 2 2 2 149 X 12354609 12355032 CAGCAATAAGGTGCTGTCG 59 12354478 12354496 GAATTGAAGCACTGGGACG 59 NA Drosophila melanogaster 61 SelG FBgn0030350 FBtr0073570 1 1 1 80 X 11781433 11781520 GTGTACATCGACCATAATGGG 58 11781561 11781580 TATCCCGACAAATAGCTCCA 58 NA Drosophila melanogaster 61 CG1703 FBgn0030321 FBtr0073520 1 1 1 151 X 11507285 11507375 ATCTCAGCCAAGGGTAACG 59 11507490 11507508 TCGATATTGGGCGGTATGG 59 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 2 3 3 80 X 11499098 11499180 CCACGATAATTATGAACTACTCGG 59 11499219 11499237 AGTCGGTGAAGCAGAAGAC 59 NA Drosophila melanogaster 61 CG11106 FBgn0030280 FBtr0073446 1 1 1 60 X 11096635 11096653 GATTGGACGATGTGGATGC 59 11096675 11096695 CCGTAGGCCTGAGTTATATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 2 2 2 117 X 10943063 10943081 TTACTGCCACAGATGTCCC 59 10943162 10943235 ACATGATGAGTCCTCGCAG 59 NA Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299861 3 1 2 146 X 10930230 10931515 CTGTGGAGGAGTCTTTAGGC 59 10930103 10930126 CAAAGTTATCCTAAGAACCTCACC 59 NA InUTR Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 1 3 4 95 X 10393679 10404376 AGGAAGGGACCTTCATAGTG 58 10393603 10393621 AATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG15307 FBgn0030192 FBtr0071442 2 1 1 80 X 10238022 10238041 GAGGCGTAACTACGATATGC 58 10238083 10240894 GACGATCGGTAATTAAGCCT 57 NA Drosophila melanogaster 61 CG15314 FBgn0030172 FBtr0071417 3 1 1 80 X 9942097 9942115 GATTATCAACTCGCCGACG 58 9942159 9942177 TATTTGGAGGTCGTCGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9689 FBgn0030159 FBtr0071390 1 1 1 261 X 9776582 9776602 GTGAAGCACTTAGTTAAGCAC 57 9776887 9776906 ACTACAAACACATTGACCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 2 2 2 60 X 9481077 9481095 GCCATACTCAATGACACCA 57 9481118 9481137 TGCAGTTGTGATTCTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42395 FBgn0259741 FBtr0300046 2 1 1 106 X 9469878 9470225 TTTGGCATTACCCTACTACAC 57 9469792 9469810 TTCCAATTCTCCAGTCCGA 58 NA Drosophila melanogaster 61 BCL7-like FBgn0026149 FBtr0071358 1 1 1 80 X 9251288 9251604 CTCTAACACCTGTTTCTCCG 58 9251647 9251665 TTCGAGTCCTCAGAGAAGG 58 NA Drosophila melanogaster 61 CG17440 FBgn0030120 FBtr0071328 2 1 1 88 X 9162927 9163012 CTATTTCAGATTCTGCCGCA 58 9162858 9162876 TTGAGCTCTAGATGCTTGC 57 NA Drosophila melanogaster 61 CG12057 FBgn0030098 FBtr0071304 2 1 1 95 X 9086058 9086076 AAATTGCCTCCGATGTGAG 58 9086135 9086153 AGTTCTTGTACGAGTTGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15336 FBgn0030009 FBtr0301688 2 1 1 60 X 8042080 8042098 TAATCGGCGACTTATGTGC 58 8042120 8042140 CTGCAGATTCCAATAGATGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17982 FBgn0030006 FBtr0071191 2 1 1 60 X 8037134 8037152 ATAGGCGATGGGACAAAGG 59 8037092 8037110 ACGTGAGGTCAATGAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15335 FBgn0030001 FBtr0071193 2 1 1 97 X 8021163 8021181 ACATCCTTAGCTCGGTGAG 58 8021002 8021103 CCTGGCATTTCTATCGTGAC 58 NA Drosophila melanogaster 61 Ir7g FBgn0029968 FBtr0071088 3 1 1 106 X 7779948 7780023 CTACAGAAGCTGGTCCAGG 59 7780092 7780111 TTCGAGTAATGCGGAAACAC 59 NA Drosophila melanogaster 61 CG12689 FBgn0029952 FBtr0071081 2 1 1 60 X 7479871 7479892 GCAACCAAACAGAGTTAATTCC 58 7479832 7479852 ACATTCTGCATTAGCTTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42240 FBgn0250869 FBtr0290308 3 1 1 69 X 6225106 6225127 CCGTGATGAAGAACAATTACGA 59 6225157 6225175 GCATTCGAACATTCTGACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12219 FBgn0043796 FBtr0070925 2 1 1 96 X 6194996 6195080 CTTGTACCTCTGCCTCTCC 59 6194918 6194936 CAGCTTCCAGAAGTTGTGG 58 NA Drosophila melanogaster 61 sqh FBgn0003514 FBtr0070877 2 1 1 95 X 6117680 6117698 GAGGAGAATATGGGCGTCC 59 6117530 6117623 ATACATCTCGTCCACATCCTC 59 NA Drosophila melanogaster 61 CG32751 FBgn0052751 FBtr0070880 2 1 1 83 X 6091017 6091037 ACCCTGCTCGATAATCTTCTG 59 6090901 6090972 CACTTGGTGACTCTCCTCG 59 NA Drosophila melanogaster 61 CG12729 FBgn0029816 FBtr0070819 1 1 1 60 X 5739522 5739540 TTCTCCACTCGATCCAGTC 58 5739563 5739582 TGGGTGACAGCTATCAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221 2 1 2 76 X 5578110 5578129 TATTATCGCGATACGGAGCC 59 5578238 5578257 ATATTGGCCATTTGGTAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Mlc-c FBgn0004687 FBtr0070783 3 1 1 126 X 5514310 5516293 AGTTGGCTGAATTCCAGGA 59 5514202 5514220 TTCTTGACATCCGACTCGG 59 NA Drosophila melanogaster 61 dhd FBgn0011761 FBtr0070749 1 1 1 61 X 5206509 5206529 CCATGAACGACTATCACAAGC 59 5206551 5206570 GAAATCCAGCACGATTAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TrxT FBgn0029752 FBtr0070755 1 1 1 120 X 5205732 5205886 ATTAAAGTCATGGTGTACCCAG 58 5205633 5205651 TTATCTTGCAAGGTCCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6903 FBgn0029737 FBtr0070723 1 1 1 80 X 4815009 4815082 CCAGAGGGTATATTCGGCTG 59 4815125 4815143 ATGCACAAGCAGTGTTACG 59 NA Drosophila melanogaster 61 CG12684 FBgn0029717 FBtr0070697 1 1 1 67 X 4465668 4465688 CGGATTCGGAACTTAATTCAC 57 4465569 4465587 GCTATCGCTAGAGGTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32773 FBgn0052773 FBtr0070703 2 1 1 60 X 4282027 4282046 TCGAGATGTCTCGATGTCAG 59 4281986 4282004 GGACATGCAGGAAGAAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 3 4 4 99 X 3846168 3846186 TCTGAGAGTCTGGACTTGC 58 3846246 3846812 GTGTGATTTGATCCTTCAAGTG 58 NA Drosophila melanogaster 61 CG42499 FBgn0260225 FBtr0300629 2 1 1 217 X 3688074 3688093 AGAATGTCATTCCTGGTCAG 57 3688273 3688291 TCCGTGAATCTGATTGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14422 FBgn0029645 FBtr0070555 2 1 1 161 X 2837515 2837533 ATCTTCTACGGAGCTCTGC 59 2837793 2837812 CATAAGCTGCTGTAAGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13762 FBgn0040333 FBtr0300708 2 1 1 81 X 2517675 2517696 CTCAATAGCTATCCAGAGTTGG 58 2517535 2517635 GGTAGTCAATCACCTTCATGC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0112811,FBtr0091965,FBtr0091966,FBtr0091962,FBtr0070451,FBtr0091963,FBtr0091964 2 8 8 80 X 2390854 2390872 AAATGCGATGGCTATGCAG 59 2390610 2390813 AGACTCTAGACAATGGTCTGTG 59 NA Drosophila melanogaster 61 CG2865 FBgn0023526 FBtr0070408 2 1 1 177 X 2176546 2186371 CAGAATCTGCCCAGAACCA 59 2176387 2176405 ATGATCCGTTTGAGGAGCC 59 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 3 2 2 282 X 2011721 2011739 CAAAGACGTCAGCGATGAG 59 2011394 2011412 TTCATCCAGTCTGTCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 moody FBgn0025631 FBtr0070341 1 1 1 80 X 1941137 1941155 CAACCTGTTGACCGTAGTG 58 1941008 1941096 ATACAGAGGCTGATGATAAAGG 57 NA Drosophila melanogaster 61 CG14818 FBgn0026088 FBtr0070364 1 1 1 86 X 1773373 1773452 CCTCCAAGAGATGGAGGAC 58 1773305 1773323 ATAATGTCGTCTGTGCGCT 59 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968,FBtr0070249 2 3 3 88 X 1117713 1117731 TTATTTGGCCTCCAGTGTG 57 1117575 1117661 CATAGGGACTTCTCATGCC 57 NA Drosophila melanogaster 61 CG42259 FBgn0259144 FBtr0299571 3 1 1 201 X 940510 940528 ACTCGACGATGCTTCACTC 59 940768 940786 CATCCATCTGGACATCGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 su(s) FBgn0003575 FBtr0070120 1 1 1 88 X 535039 535117 ATTGGAAAGCAGCACTCCT 59 535167 535187 TGTAGTCCACCATGATGAGTC 59 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 2 3 3 80 X 528200 528221 GAAGTTGCTAATCATACAAGCC 57 528073 528161 GTCACGTCTATCCTAAAGAGC 58 NA Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947 2 1 2 93 X 371240 371258 AACAACAATCTCACGCAGC 59 371314 371648 TTGTCTTCTCATGGACCTCC 59 NA Drosophila melanogaster 61 l(1)sc FBgn0002561 FBtr0070074 2 1 1 60 X 304163 304182 AAACTGTGGTAAACTCGCTG 58 304203 304223 ACCTTGGATAACTTCTTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42423 FBgn0259854 FBtr0300150 1 1 1 60 U 7569732 7569751 GCAATTAAACAGATTCCGCA 57 7569691 7569711 TGAGGTGTATTAGTAGGTGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42417 FBgn0259848 FBtr0300145 2 1 1 86 U 6871168 6871187 CCTCCGAATATAGTCCTGGT 58 6871236 6871254 CATCAAGGCATTCTGGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40968 FBgn0085546 FBtr0302238 2 1 1 60 U 6307220 6307238 CCAGCTACCTGAATCAGAC 57 6307261 6307280 CTTAATCTCCGCGTTATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 3 1 3 94 4 996100 996121 CCGAGAGTACTATTAATGCGAG 58 996175 997397 TACACAAGATGGAGAAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 3 6 6 81 4 302513 302589 TCTTCCTTTATGTCAGGTTGAC 58 302453 302471 TCCGCATTTATCCTTTGCA 57 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 3 2 3 83 3R 27637149 27637169 CAATATCCACAGTACAGCTGC 59 27637031 27637104 CGAGGGCAGATTATTGCTC 58 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 2 4 4 114 3R 27567455 27567473 CAACGTGAAGAACGTGTCC 59 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 CG34046 FBgn0054046 FBtr0100101 3 1 1 60 3R 27535055 27535074 CAAGCAAGGCTCATACACTG 59 27535094 27535185 CTTGTAACTCCATAAGCTTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 2 2 2 114 3R 26877545 26877563 CCTTTAATGGTTACGCGCT 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 CG31019 FBgn0051019 FBtr0085665 1 1 1 80 3R 26424350 26424431 ACAACGAAGATGGCTATTACC 58 26424472 26424491 GCAGGATGTTAATGAAGCGA 58 NA Drosophila melanogaster 61 CG9717 FBgn0039789 FBtr0085679 3 1 1 191 3R 26411022 26411040 GAGTGATCAAGCCCATGTG 58 26410590 26410799 TCAGACCAGTAGTTGTCGC 59 NA Drosophila melanogaster 61 CecA1 FBgn0000276 FBtr0085612 1 1 1 150 3R 26036721 26036739 ATTGGACAATCGGAAGCTG 58 26036914 26036932 ATCATCGTGGTCAACCTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085583 1 1 3 96 3R 25959807 25959981 AACTTCGAGTTCTACGCCA 59 25959729 25959747 TCATCTTCCAGTTGCCTCC 59 NA InUTR Drosophila melanogaster 61 CG31202 FBgn0051202 FBtr0085510 1 1 1 60 3R 25755629 25755648 CGTTGTCCGTTTATGAACTG 57 25755588 25755609 AGGGAATATAGAGTGAGCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15515 FBgn0039719 FBtr0085500 1 1 1 93 3R 25731778 25731796 GAGTATTACAACCAGGCGC 58 25731910 25731928 TCATGATCACGCCCATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089927 2 1 2 88 3R 25684432 25684506 GATGACAATGATCGTGGCG 59 25684362 25684380 TGATTAGCGTCCTGTGGAG 59 NA Drosophila melanogaster 61 CG11501 FBgn0039666 FBtr0085426 2 1 1 67 3R 25319821 25319839 GATCGTGCAACATCTTCGG 59 25319869 25319888 AAATTCCTGTGACCAATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 3 3 3 80 3R 25073691 25073709 CCTGAACCGACAACTTGAG 58 25073566 25073648 GTAACCGAGATCCATTTGGT 57 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 2 10 10 108 3R 24963146 24963164 TATTGACCTGCGTGTTTGC 59 24963236 24963314 AACTCGACCCAATGGAGAC 59 NA Drosophila melanogaster 61 CG1443 FBgn0039620 FBtr0085345 2 1 1 95 3R 24820390 24820408 ACACCTTCACCAAAGTCCT 58 24819958 24820331 AAGTGGTGATCACAATGCC 58 NA Drosophila melanogaster 61 CG9986 FBgn0039589 FBtr0085304 2 1 1 98 3R 24433344 24433362 CAGTGGTGCATCAGAAGAG 58 24433423 24433501 TTGCAAGGTGCTTAACTCAG 58 NA Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303,FBtr0301302 3 2 2 80 3R 24314707 24314725 ATGGAGTCCTGTGACTTGG 59 24314766 24314911 ACTGAAGTTTGGTATCTCCCTC 59 NA Drosophila melanogaster 61 Mst98Cb FBgn0004171 FBtr0085278 3 1 1 77 3R 24118812 24118830 AGAAACGCGTTGTGTTCAC 59 24118871 24118889 TTGGAATGGTGATCTGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31054 FBgn0051054 FBtr0085256 2 1 1 69 3R 23787100 23787118 AAGCCGCTTATAGAGCCAG 59 23787151 23787169 CATCTGTCAAGATGCCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5987 FBgn0039501 FBtr0085180 1 1 1 80 3R 23074191 23074274 TCACCGAGAATATCTACAGCA 58 23074131 23074151 GATAGAGATGCGGATAGACGA 58 NA Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085084,FBtr0085085 1 2 2 97 3R 22777567 22777585 ACATTGAGCTCATGGACCA 59 22777133 22777506 GCAAACGAACTTAACGTCG 58 NA Drosophila melanogaster 61 TwdlQ FBgn0039448 FBtr0085049 1 1 1 229 3R 22519067 22519242 CGAGGATTTCTGTTACTCTTACTC 58 22518861 22518879 TCCTTGCTGAACTCATCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 2 3 3 83 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG14543 FBgn0039404 FBtr0084968 2 1 1 89 3R 21882431 21882451 AGAAGATCTTCAATCACTGGC 58 21882502 21882584 TGATTTCTATGGCCACCTG 57 NA Drosophila melanogaster 61 Tsp96F FBgn0027865 FBtr0084912 2 1 1 123 3R 21701835 21702261 TGGTTTCGTTCTTCTGTGTC 58 21701731 21701749 TGGACTGACGACTTGACAG 59 NA Drosophila melanogaster 61 CG4553 FBgn0039336 FBtr0084839 2 1 1 62 3R 21302321 21302342 CCGTCAGTTTATGATAAAGCAC 57 21302280 21302298 TGAAGCAAGAGATTGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13653 FBgn0039288 FBtr0084804 3 1 1 163 3R 21021344 21021362 TCTCTACATCAAGAGCGCG 59 21021555 21021575 CCAGAATGAATCGATTGAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9996 FBgn0039273 FBtr0113285 3 1 1 91 3R 20899624 20899896 AACGAATTGCAGACTGGGA 59 20899551 20899574 GCTGACTTAATCATAACCAGAGTC 59 NA Drosophila melanogaster 61 CG9996 FBgn0039273 FBtr0113285 1 1 1 90 3R 20899624 20899896 AACGAATTGCAGACTGGGA 59 20899552 20899576 CTGACTTAATCATAACCAGAGTCTC 59 NA Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 2 2 2 93 3R 20890642 20890660 CGAATAATACCTGGAGGCG 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 2 2 2 81 3R 20708755 20708773 ATCTACCACGACACATGGG 59 20708636 20708715 GTGACCAAATCCAAGTAATAGTCC 59 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 2 2 2 152 3R 20446822 20448648 TAAGTTCCACGGAGCTCAC 59 20448764 20448782 GTCAAAGGTGTCTCCTCGA 59 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324,FBtr0273323 3 2 2 82 3R 20179237 20179351 AACCATATCTGACGATGTCTG 57 20179392 20179413 GCGATACAGATCGATTAAACAC 57 NA Drosophila melanogaster 61 CG6178 FBgn0039156 FBtr0084550 2 1 1 109 3R 19979389 19979409 GAGGACGTGTCTCTTATTGTG 58 19979479 19979554 GTGGGTTGGATTTGTGAGTC 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 3 2 3 94 3R 19977632 19977652 CATCGGAATGGAGTAATAGCG 58 19977482 19977579 TGTATTGATTCTCTGTTCCACG 58 NA InUTR Drosophila melanogaster 61 CG31142 FBgn0047114 FBtr0084492 1 1 1 138 3R 19755127 19755249 TGGCAAAGATAAGCTATGCAG 58 19755344 19755367 CTTATGGTTTCATAGAAGGCACTC 59 NA Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 3 2 2 90 3R 19587401 19587419 GAAATCCTGTGCCTGTTCG 59 19587271 19587349 CCACCAAGAATTCTCGTTCTG 59 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 3 4 4 80 3R 18614231 18614310 GTTTCTATGCGGATCCCAG 58 18614353 18614372 CTATGTCCTCCAGATTGCTG 57 NA Drosophila melanogaster 61 CG4907 FBgn0039010 FBtr0084330 2 1 1 151 3R 18535615 18535691 ATGGGATAAGTCTGCACGG 59 18535482 18535501 TTCCAGCTGGTATAATGGCA 59 NA Drosophila melanogaster 61 Nup133 FBgn0039004 FBtr0084302 2 1 1 80 3R 18520001 18520084 GATTATCAGCCTTTACATCGC 57 18520125 18520144 TAGCTCAGAAGTTCCAAAGC 57 NA Drosophila melanogaster 61 T-cp1 FBgn0003676 FBtr0084290 1 1 2 130 3R 18317067 18317150 TCGAAGTCTTAAATCGCGGA 59 18316719 18316737 TTCGATATGGACAGAGCGG 59 NA InUTR Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218,FBtr0301029 1 3 3 80 3R 18208157 18208178 ATCGGAGATCATAAACACTCGT 59 18208216 18208295 TTTACAGCGATCAGGTTATTGG 58 NA Drosophila melanogaster 61 CG7069 FBgn0038952 FBtr0084215 2 1 1 81 3R 18198668 18198686 CCATATGTTCCACTTGCCT 57 18198730 18198801 AACTTCGGTGGTTTCTTCTC 58 NA InUTR Drosophila melanogaster 61 CG31353 FBgn0051353 FBtr0084191 1 1 1 60 3R 17804574 17804593 GCTAGGCTAGAGAACTGTGG 59 17804533 17804551 TAAAGTAGAGCCTGGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31465 FBgn0051465 FBtr0084147 3 1 1 118 3R 17708497 17708518 CCACTCAAATGAATCTATCACC 57 17708597 17708673 GATCTGACTTGCTGATGGT 57 NA Drosophila melanogaster 61 CG31465 FBgn0051465 FBtr0084147 1 1 1 83 3R 17708593 17708670 GCATACCATCAGCAAGTCAG 59 17708716 17708734 TCTGTGATGGTGGACTTGG 59 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 3 2 3 81 3R 17693173 17693192 ATCGAAACCATGGAGATGGA 58 17692971 17693129 AGTACCGCTGTATGACCTG 58 NA Drosophila melanogaster 61 Gr93d FBgn0045468 FBtr0084158 3 1 1 181 3R 17671339 17671418 CATTGGATGAAATCGGTGGA 58 17671177 17671197 CAAATAACATAGCGTCTGCGA 59 NA Drosophila melanogaster 61 C15 FBgn0004863 FBtr0084111 2 1 1 120 3R 17333021 17333039 GACTGAAGATGACCGATGC 58 17337812 17337830 GACAGCATCAGTCTGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6475 FBgn0038886 FBtr0113260 2 1 1 96 3R 17224251 17224394 CTACTTTAGTTTGGGATCTCAAGTG 59 17224179 17224197 GACCCTTTGCTTCAAGCTG 59 NA Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 3 2 2 85 3R 16326280 16326615 GAGGCGCAACTATAAGCAC 59 16326213 16326231 TCGAGGAGCCATTGAAGAG 59 NA Drosophila melanogaster 61 mun FBgn0261342 FBtr0302264 2 1 1 101 3R 16207791 16207908 CACATACATCGATAATCAGACGC 59 16207712 16207730 TTCAGTTTGCCATCGTGTG 59 NA Drosophila melanogaster 61 Sirt2 FBgn0038788 FBtr0083882 2 1 1 98 3R 16154684 16154758 GCATATCTACATCTGCTGGC 58 16154819 16154837 ATATGGCCGTAGGATGTGG 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 2 2 5 151 3R 15842346 15842364 CATTAAGGAGCGAACGGGA 59 15842475 15842565 GTCAAGAGATTGCCTATTCATCC 59 NA InUTR Drosophila melanogaster 61 CG31213 FBgn0051213 FBtr0083824 1 1 1 80 3R 15801138 15801162 CTATCTCAGTTTGGATTATGGTCAG 59 15801197 15801594 GCAGTCCCAAGTACATTAACTC 59 NA Drosophila melanogaster 61 CG17186 FBgn0038741 FBtr0083858 2 1 1 199 3R 15702995 15703074 CGAAATGGAATACTTGCACCT 59 15702816 15702834 ACGATTCCACCTCAGACTC 58 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492,FBtr0083805,FBtr0083806 2 3 3 80 3R 15463904 15463997 GGAGTATCTCTTTGACATCCGA 59 15463845 15463866 CGATCTAGGATGAACTCAACGA 59 NA Drosophila melanogaster 61 CG31404 FBgn0051404 FBtr0083774 3 1 1 60 3R 15201631 15201652 AATAAAGACTTCTGAGCCATCG 58 15201592 15201613 CTGCTCAACAAATTCATTAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 3 5 5 104 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751701 14751719 ACTGCGTAGATCCTCTACG 58 NA Drosophila melanogaster 61 TwdlW FBgn0038487 FBtr0083415 2 1 1 89 3R 12967936 12968028 ATATTTGTGACGGTTCTGATGG 58 12967868 12967886 GATGCGGTAGTTGTAACCC 58 NA Drosophila melanogaster 61 modSP FBgn0051217 FBtr0083353 2 1 1 87 3R 12479031 12479051 AGTTCTATCGCAATTACGGAG 58 12478907 12478982 CTTCCTTTGTAGCCAGGTG 58 NA Drosophila melanogaster 61 CG14894 FBgn0038428 FBtr0083314 1 1 1 61 3R 12268145 12268163 TATAGAACTGTGGCCGGAG 58 12268048 12268066 CTTGCTCATAGAGCTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17929 FBgn0038415 FBtr0273219 2 1 1 83 3R 12151458 12151536 CCTGTGCAGTGTTCTTTCTG 59 12151582 12151600 CCGTGGTGTTTAAGGTCTG 58 NA Drosophila melanogaster 61 Mst89B FBgn0020399 FBtr0083260 3 1 1 91 3R 12092870 12092948 CACCACCTGTTCACATTCC 58 12093003 12093021 TATCACTCGCGTGTCTTCC 59 NA Drosophila melanogaster 61 Bin1 FBgn0024491 FBtr0083279 3 1 1 66 3R 12012468 12012489 TGGAATCTATGATTGTGGAGGA 58 12012350 12012441 ATAGGACAGGTCTTCTCGC 58 NA DesignRelaxed Drosophila melanogaster 61 ird5 FBgn0024222 FBtr0083236 3 1 1 85 3R 11872782 11872868 GACCTATTCGATTGCGCTC 58 11872715 11872736 TCGGCGTCATTATTTAACTCTG 59 NA Drosophila melanogaster 61 CG34275 FBgn0085304 FBtr0112470 2 1 1 70 3R 11738474 11738492 GATCACGAGGATCACGAGG 59 11738150 11738440 TGCTTCTCCAGATTGGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 3 3 3 97 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616525 11616546 TTCTTTGTGTAGCTTCTCACTG 58 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 2 2 3 84 3R 11085400 11088278 ATCAAGCTGGGTTATGCCA 59 11085334 11085352 ATGCATCCGATACGAAGCT 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083057 2 1 6 100 3R 11068436 11068454 CAGTTTGATCGAAGGTGCG 59 11068516 11070096 AGGAGCTTTAGACATCTTGTG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060 3 1 6 124 3R 11070024 11070100 TATGTCTAAAGCTCCTGCTG 57 11070186 11070205 CATAGGATGGAGTGGTACGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 1 2 2 80 3R 11056750 11056768 CCTTATACACCGCCAAAGG 58 11056810 11056896 AGTTTGTAATGGAGGTTTCGG 58 NA Nonspecific Drosophila melanogaster 61 Rpb7 FBgn0051155 FBtr0083137 1 1 1 80 3R 11048473 11048493 GTCAAGCAGATCAACAAAGTG 58 11048356 11048431 GGCGGGAATAGAATGATGC 58 NA Drosophila melanogaster 61 CG14861 FBgn0038280 FBtr0083023 2 1 1 60 3R 10840749 10840770 ATCTGATGAGGAGATCGAAGAG 59 10840788 10840809 ACAGGATGTAAAGGATGTACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rrp6 FBgn0038269 FBtr0113235 2 1 1 96 3R 10711476 10711568 GCATTCACAAACAAAGGGT 57 10711398 10711417 GATAGCTTAGGTAAAGGGCG 58 NA Drosophila melanogaster 61 CG3610 FBgn0038266 FBtr0082994 3 1 1 60 3R 10671548 10671571 GGATACAAGATCATCGAATAGCTG 59 10671589 10671608 TCCTTGCATTCCTTTAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 1 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 3 3 3 96 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551637 10551764 GGCTCCAGATGTTGATCGT 59 NA Drosophila melanogaster 61 CG8461 FBgn0038235 FBtr0082986 1 1 1 117 3R 10339131 10339211 AAACTCAGAATGCCATTCGC 59 10339033 10339051 GAACTCTTGCTACCGAGCA 59 NA Drosophila melanogaster 61 HtrA2 FBgn0038233 FBtr0082987 3 1 1 99 3R 10336613 10336631 GGTACAGGTGAGGCTATCC 59 10336464 10336550 ATTGTTCACCTGTATGCGC 58 NA Drosophila melanogaster 61 CG31321 FBgn0051321 FBtr0082926 1 1 1 80 3R 10138814 10138895 ATAACGGCAGAATGTTGCT 57 10138939 10138957 AATAGTCGTTCTCACCGGA 58 NA Drosophila melanogaster 61 CG9616 FBgn0038214 FBtr0300059 1 1 1 129 3R 10071060 10071081 CATGAAAGACAAACAACAGACC 58 10070897 10070970 TGAACCCACAAACAAGTCG 58 NA Nonspecific Drosophila melanogaster 61 CG31327 FBgn0051327 FBtr0082904 1 1 1 60 3R 9984509 9984528 CGAAGGAGAGGATTTCTGTG 58 9984468 9984486 TCTGGAGAGGTAAGGACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6d5 FBgn0038194 FBtr0089766 2 1 1 119 3R 9856498 9856607 GTATACTCGAGACTGCTCG 57 9856688 9856708 AGATTATGATGGGAGTACCCT 57 NA Drosophila melanogaster 61 Cht5 FBgn0038180 FBtr0082826 3 1 1 87 3R 9594691 9594800 CGAGAAACTGAATGTGAACGA 59 9594849 9594867 GTAGAAGGGAACACCCACC 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621,FBtr0112624,FBtr0290011,FBtr0112623 2 5 5 90 3R 9585498 9585579 ATCGAAATAACACCAACTGGAG 58 9585630 9585648 GAACGAACGACATCAGGAG 58 NA Drosophila melanogaster 61 CG9588 FBgn0038166 FBtr0082849 1 1 1 83 3R 9501579 9501597 ATCACGGATCTTGCTCCTG 59 9501450 9501532 ACAGAGACCAGCTCTTTCG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 1 8 8 81 3R 9487885 9487905 ATTCGAAGACTATCGTGATGC 58 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 67 3R 9210299 9210407 TTGGAGGACTTTGATCCCA 58 9210438 9210456 CCATCGTCCTCATCGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082720 3 1 2 98 3R 8823042 8823175 TACAAGGTGCAGGACATCC 59 8822962 8822981 CATCTTTAGGTCGGTTCGGA 59 NA Drosophila melanogaster 61 d-cup FBgn0038089 FBtr0082683 2 1 1 80 3R 8718223 8718244 AGATCATTTCATCTTCGGTCGA 59 8718285 8718356 AATCGACCATGTCCAGTCG 59 NA Drosophila melanogaster 61 CG5608 FBgn0038058 FBtr0082680 2 1 1 80 3R 8289839 8289861 CGTATGCTAGTGGCATATTTACG 59 8289729 8289800 CGCACTCTTTAATGCTCCTC 59 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579,FBtr0082578 3 3 3 60 3R 8213641 8213712 TGAAGGAAGTCTTCTCGCTC 59 8213732 8213753 AGATCATCCTTCGAGATCAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 GstD9 FBgn0038020 FBtr0082608 1 1 1 60 3R 8192395 8192417 CTATACTGATTTATCTGGCCGAG 58 8192357 8192377 GGATCCTTGGGATAAAGGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3313 FBgn0037980 FBtr0082555 2 1 1 80 3R 7841113 7841197 AAAGGAATTGTGTATCCGGAG 58 7841053 7841072 ATAGCAGTGGGTGTAGATGG 59 NA Drosophila melanogaster 61 CG6908 FBgn0037936 FBtr0082437 3 1 1 89 3R 7514791 7514874 TGACAAATGATGTGCAGGC 59 7514720 7514740 TTAGAACTCGGAATTCTCCCT 58 NA Drosophila melanogaster 61 scpr-A FBgn0037889 FBtr0082357 3 1 1 80 3R 7067026 7067112 AACAACAAGGGAAACTTCAGTG 59 7067152 7067171 GAGGATGAGTTTGTGATGCG 59 NA Nonspecific Drosophila melanogaster 61 CG6621 FBgn0037855 FBtr0082329 3 1 1 87 3R 6718286 6718369 CCATAAAGGCCGTGATCCT 59 6718217 6718237 ATGTCATTCTGGACAAAGCTG 59 NA Drosophila melanogaster 61 CG14696 FBgn0037853 FBtr0082332 3 1 1 107 3R 6709204 6709282 GGCTCGAGTATAAGGAACCC 59 6709116 6709135 AATAAGAGGTGCTCACGTCC 59 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0082301,FBtr0300078 3 2 3 80 3R 6638917 6639199 CGATGACGATCAGATCGTG 58 6638855 6638877 TCCTCACAGAATATGGTATCCAG 59 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273,FBtr0302571,FBtr0301310 3 4 4 115 3R 6590906 6590975 GACGACTGCTCATTGATCC 58 6591054 6591072 CAAATGTCCAGGATCTCGG 58 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 2 1 1 101 3R 6586244 6586326 GATTGACGATATCAGTCTGCTG 59 6586164 6586182 TGCATTTCCATCATGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0112895,FBtr0082238 2 2 2 81 3R 6191821 6191839 GGAGCAGAACTACCAAGTG 57 6191683 6191776 GAACGGATACGTCATTTGC 57 NA Drosophila melanogaster 61 CG34303 FBgn0085332 FBtr0112499 1 1 1 88 3R 5977396 5977414 GCTGTGCGAAATTAAGGCT 59 5977270 5977347 GGATCTCAACCTCTGATATGGT 59 NA Drosophila melanogaster 61 CG32937 FBgn0052937 FBtr0082089 3 1 1 60 3R 5552345 5552364 TAACAGCCACTTGACAATCG 58 5552304 5552322 CTCATTGGCACTACTCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082075 2 1 2 177 3R 5417893 5433638 AACAATTAACACCAGGCCC 58 5447320 5447341 GCTCCATTGAGAATTTGTTACC 58 NA InUTR Drosophila melanogaster 61 CG31100 FBgn0051100 FBtr0082011 2 1 1 93 3R 4825232 4825254 CCATTAACCTGATATGTGTACCC 58 4824819 4825179 AGGTTGACAAACTGCATGG 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0301425,FBtr0089784,FBtr0089782,FBtr0112823,FBtr0089781,FBtr0114459,FBtr0112822 2 8 8 96 3R 4666329 4668402 GATCGATTGCAAGTCAACG 57 4666251 4666269 CACTATCGCGTAACACCTG 58 NA Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081932 3 1 2 151 3R 4645735 4645754 AACGCTTGTCGAAATATCGA 58 4644939 4644958 TCTTCGCTGATTTAACTGCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13318 FBgn0037627 FBtr0081942 1 1 1 91 3R 4597895 4597977 GAGGATATCCCACTGTTCCA 58 4597823 4597841 ACCACACTGATAGCTTCCC 59 NA Drosophila melanogaster 61 CG11698 FBgn0037572 FBtr0081833 1 1 1 60 3R 4138258 4138276 CTCTCAACGGGAAGAAGCA 59 4138300 4138318 CTGTTCGTTTCTGCCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtg FBgn0260386 FBtr0300601 3 1 1 86 3R 4085352 4085370 ACCTACAAGCTTCTCCTGC 59 4085418 4085509 CATACGTGGAATACCATGCAG 59 NA Drosophila melanogaster 61 CG10435 FBgn0037539 FBtr0081820 2 1 1 80 3R 3837903 3837921 GCTCAATACCTAACGCCCA 59 3837428 3837861 CATGTGGTACACCTGAAAGTG 59 NA Drosophila melanogaster 61 CG14463 FBgn0037535 FBtr0081783 3 1 1 121 3R 3826211 3826314 GAAGTTATTGAAGACTTGGACG 57 3826456 3826474 TGCAGACACTCAATTGAGG 57 NA Drosophila melanogaster 61 CG10053 FBgn0037490 FBtr0081576 3 1 1 169 3R 3073003 3073091 ACAAATTCCTGGTTGGTCTG 58 3073223 3073241 GTTGAGGGACTGTTGAAGG 58 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 2 2 2 122 3R 2972596 2972675 TACTCGAAGATGAATCCGC 57 2972492 2972510 ATATAGCGTTGAATCCGGC 57 NA Drosophila melanogaster 61 CG1965 FBgn0037466 FBtr0081634 3 1 1 84 3R 2896538 2896625 TCCAAAGCAAGTGCAAGAG 58 2896670 2896691 GCTTAGGAAATTTCGAAACAGC 58 NA Drosophila melanogaster 61 CG1137 FBgn0037454 FBtr0081705 2 1 1 102 3R 2385616 2385879 CCAGCATGAATTTGCAACC 58 2385532 2385550 TTTCGGCATGATTAGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600,FBtr0078601 1 2 2 156 3R 2092756 2092839 CATATCATTGCTGGGCAGTC 59 2092958 2092976 TACCTGATCCAACTGCGAG 59 NA Drosophila melanogaster 61 CG1236 FBgn0037370 FBtr0078721 2 1 1 81 3R 1562591 1562609 CAAGGTGTACGTAACCAGG 57 1562730 1562748 ATGCCAGGTACTCACTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2926 FBgn0037344 FBtr0078752 1 1 1 80 3R 1410390 1410904 CATCTGATAAGGATGATGACGA 57 1410331 1410351 GCAATGGTATATCCGTATCCT 57 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 1 3 3 121 3R 1314884 1314902 AAACCAAGGACTTGGTGTC 57 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0078788,FBtr0100433 3 2 2 138 3R 1201814 1201888 AAAGTTCAGGTGTGAGCCT 59 1201990 1202008 GGGTTAGGTTGCCAATTCG 59 NA InUTR Drosophila melanogaster 61 CG34277 FBgn0085306 FBtr0302422 1 1 1 226 3R 1196128 1196208 CAATGTGACCGCTAATGGG 59 1196398 1196416 TAAACTACGGCTTATCGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14662 FBgn0037291 FBtr0078846 3 1 1 111 3R 808112 808364 GTATGAGCAAGTGGGAGGT 59 808019 808038 ATACTTGTTCGACTCCGTGG 59 NA Drosophila melanogaster 61 Dsk FBgn0000500 FBtr0078989 3 1 1 60 3R 15638 15661 GATCTCCTCATGGATAATGATGAC 58 15601 15619 GGCCGTAATCATCAAACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 2 2 3 126 3L 24530715 24535529 TTACCTGCTGAAGACATTTGG 58 24535617 24535635 CGAATCCGATAGATTGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0078581 1 2 3 145 3L 22794835 22825049 GCCTGTCAATTTGTTGAACC 58 22794709 22794727 GTAGTTGGCTCTTTCGCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Trxr-2 FBgn0037170 FBtr0078514 2 1 1 60 3L 22543852 22543873 AAAGGTGGAGTACGTAAATTCG 58 22543894 22543912 CACATACTCGATGGTGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493,FBtr0078494 3 3 3 88 3L 22262582 22262685 GGCTGATAAGTTCAAGGAAGTC 59 22262734 22262752 CCAAAGAGCCGTAGTTGTC 58 NA Drosophila melanogaster 61 S1P FBgn0037105 FBtr0078466 3 1 1 85 3L 21609583 21609601 CTTCCAGGGAATGCCTAGG 59 21609458 21609537 GGAAGTGTAAGAAACTTGGGAG 59 NA Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 1 2 2 134 3L 21297182 21297400 ACAAAGACAACGTCGTTACTG 59 21297068 21297086 TCACTGCCGGTAATAGTGC 59 NA InUTR Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 2 2 2 125 3L 21276339 21276359 ATTTCCATGATGGTCATCTCC 57 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 CG13255 FBgn0040636 FBtr0078263 3 1 1 60 3L 20831554 20831574 TGCTTCATACTGGTCAATGTG 58 20831596 20831614 TTGATACCTCGCCGTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5078 FBgn0037005 FBtr0078208 1 1 1 60 3L 20500170 20500190 GAAACTCAAGGAGCAGTTCAG 59 20500211 20500230 CAAGTCCACTACACAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-F FBgn0036947 FBtr0074860 2 1 1 100 3L 20194437 20194582 TCAGCCATATCTGCTTGGG 59 20194355 20194374 GTAGAGTAGAGTGGGCACAC 59 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302714,FBtr0302712,FBtr0302713,FBtr0302716 3 5 5 84 3L 20148055 20148073 GATCCAAACGGCCATATGG 58 20147927 20148009 GGCTAGGAACAAATCAGTCAC 59 NA Drosophila melanogaster 61 fln FBgn0005633 FBtr0074910 3 1 1 96 3L 19983181 19983261 CACGGAATATCAGTGGCAG 58 19983103 19983124 TTATAAGTTCTTATCGAGGCCG 57 NA Drosophila melanogaster 61 CG34258 FBgn0085287 FBtr0112452 1 1 1 86 3L 19945010 19945028 TTTGCTTGGCTCTCAAGTG 58 19944885 19944961 TTTCATGATCGGCTGAAGAG 58 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 2 2 2 116 3L 19598218 19598236 TAGACATGATCCGCAGTGG 59 19598065 19598141 TTGTGTAGCACATAAGATCCTG 58 NA Drosophila melanogaster 61 ash1 FBgn0005386 FBtr0074970 3 1 1 83 3L 19584577 19584665 CGCCCAATAAACAGATGCT 58 19584512 19584531 GTGCATCCAGACACTTAAGC 59 NA Drosophila melanogaster 61 CG9629 FBgn0036857 FBtr0075017 3 1 1 105 3L 19261550 19261956 CCTACCAACATGTTGGCAC 59 19261463 19261484 CAATGAGATATGACGAGGACGA 59 NA InUTR Drosophila melanogaster 61 qjt FBgn0036730 FBtr0075223 1 1 1 165 3L 17472340 17472415 ACCTAATTTCAGGCTAGCCT 58 17472543 17472561 CATCGCTGAAATCGGACAC 59 NA InUTR Drosophila melanogaster 61 sec3 FBgn0086475 FBtr0075231 2 1 1 82 3L 17415683 17415701 AGTGTTATAACGATGCGCT 57 17415541 17415639 GCCTTCGAAGAATTGATTCAG 57 NA Drosophila melanogaster 61 beg FBgn0036691 FBtr0075278 2 1 1 60 3L 17029411 17029429 CCGGATACCAATCTGGGAG 59 17029453 17029471 CTCCTTTGTCCAGACACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 3 2 2 89 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774827 16774845 GTGCTTCTCATACTTGGGC 58 NA Drosophila melanogaster 61 CG4925 FBgn0036614 FBtr0075428 3 1 1 81 3L 16343984 16344004 GAAATGGGTCACTTGGAATCC 59 16343864 16343941 GTTCTACAACCGCTTTGGC 59 NA Drosophila melanogaster 61 CG33689 FBgn0053689 FBtr0091669 3 1 1 130 3L 16193690 16193709 TTGACTACACCTTCGATGGA 58 16193802 16193873 CACAATGATGTCGTGGTCG 59 NA Drosophila melanogaster 61 Eig71Ed FBgn0004591 FBtr0075572 1 1 1 80 3L 15645930 15645952 GAACTAAGACTCGGAACAATTGG 59 15645989 15646086 GATTAGAACCCAAGCAGTTCAG 59 NA Drosophila melanogaster 61 CG3349 FBgn0036459 FBtr0075623 2 1 1 60 3L 14975280 14975299 AAATCGCTTCGCTACAACAG 59 14975321 14975340 TGTTCAGTATTCTCCGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gnu FBgn0001120 FBtr0075697 3 1 1 125 3L 14796263 14796340 TCTATAGAGATCCCGCATCC 58 14796157 14796175 CAAAGAGTCCGTATCTCGC 58 NA Drosophila melanogaster 61 CG13474 FBgn0036439 FBtr0075711 2 1 1 60 3L 14690018 14690038 TTTCAACTGAGCAATAGCGAG 59 14689978 14689999 AGTCACAACTTCCTATAGACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075680,FBtr0075679 1 2 2 84 3L 14660501 14660578 AAGAAGGTCCTCAATGTGC 57 14660626 14660644 TATATCCCTTGCAAGCACC 57 NA Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749,FBtr0075750 2 2 2 60 3L 14090174 14090192 CTCATACAGGAACTTGCCC 57 14090132 14090150 TGATCAATTGGCTCTGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0301405 3 1 3 86 3L 13375926 13376022 TGCATCGTAGTAGCAGCTC 59 13376072 13376090 ATAGTGATGATCGGAGCCC 58 NA Drosophila melanogaster 61 CG14113 FBgn0040814 FBtr0075837 2 1 1 97 3L 13322326 13322397 CGAAGAAGAGGTATACACGG 57 13322457 13322475 ATCTGAGTGCATACTGCAG 57 NA Drosophila melanogaster 61 mRpL20 FBgn0036335 FBtr0075897 3 1 1 104 3L 13010852 13010870 ATCAAGCCATGGTCTTCCT 58 13010703 13010784 TTCTATAATGCGCTGCCAG 58 NA InUTR Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 3 3 3 118 3L 12842191 12842272 CAACTCTTAATGCGGATGGC 59 12842092 12842110 TGGTCGCTCCCTTATTGTG 59 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 1 3 3 80 3L 12838206 12838226 AAAGTCGAATCATGAGGAGAC 57 12838014 12838164 TTGAAAGTCACCTCTTCCG 57 NA Drosophila melanogaster 61 CG10616 FBgn0036286 FBtr0075956 3 1 1 83 3L 12465224 12465242 ATCAACTCACAGGCATTGG 58 12465288 12465657 CACAAAGATTCCGATGACGT 58 NA Drosophila melanogaster 61 CG32104 FBgn0052104 FBtr0075986 1 1 1 80 3L 12392163 12392254 GCGTATGGATAAAGCTCCT 57 12392101 12392120 GTAGTAGAAGTAACACGCCC 57 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 3 1 1 60 3L 11788063 11788081 TACACCGCCAAAGTAAAGC 58 11788103 11788182 GGCTCAATGTAAATGCCTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr68a FBgn0041231 FBtr0076118 3 1 1 60 3L 11745376 11745394 CAAGCAGTTCCAGAACCTC 58 11745415 11745436 CTGAAGATCCTGTTTGATGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32088 FBgn0052088 FBtr0076116 2 1 1 80 3L 11721543 11721618 AGTTGGTAACACGGAAACAG 58 11721661 11721679 ATCCAGTTATCCGGGTCAG 58 NA Drosophila melanogaster 61 CG14132 FBgn0040817 FBtr0113334 3 1 1 175 3L 11708141 11708159 GCAGCAATTTACTCCCAGC 59 11705821 11705839 ACATAGGGACAGGTCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14135 FBgn0036193 FBtr0290309 2 1 1 80 3L 11685389 11685407 AATGCCAAGGATCATGTGG 58 11685449 11685531 TAAGGAGCATATTTCGAGCTC 57 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 1 4 4 80 3L 11520328 11520347 CTGATCTCAAAGCCCTAGTG 57 11518762 11520285 CAAATAGAGCGAGGGTGTG 58 NA Drosophila melanogaster 61 Sgs7 FBgn0003377 FBtr0076095 2 1 1 132 3L 11503016 11503100 CATCATCGCTTGCATCCTG 59 11503196 11503214 GAGCTGCTGACAAAGTTGG 59 NA Nonspecific Drosophila melanogaster 61 CG34012 FBgn0054012 FBtr0100067 2 1 1 97 3L 11102163 11102257 TGCTAGTGCCTATGATTAACAC 58 11102087 11102105 CTCCATGAAGAGCATCTCG 57 NA Drosophila melanogaster 61 CG6272 FBgn0036126 FBtr0076234 2 1 1 109 3L 11090963 11091109 AAACAATGAGGCTGTTCAGC 59 11090873 11090893 TCTGAACCTTAAGAGCATCGT 59 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 3 3 3 99 3L 11051886 11051904 TGGAATGACTATGTGGCCA 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 2 1 1 74 3L 10872398 10872470 GACTTTGTTGGCTTCGGTG 59 10872504 10872526 GTGAAACCTAGTATAGAGCAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 1 3 3 101 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 CG3434 FBgn0036000 FBtr0076473 1 1 1 80 3L 9452686 9452766 TCTTACTGATGGTTCACAACCT 59 9452627 9452647 GAAGCGTATCTTTAGCCACAC 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535,FBtr0076536 3 2 3 94 3L 9154426 9155848 GATTGACTATAACCGCATCGTG 59 9152837 9154371 CGTGTAACCGAAGCTTTCG 59 NA Drosophila melanogaster 61 CG4641 FBgn0035967 FBtr0076533 2 1 1 155 3L 9136283 9136304 CGCTCTATAACATTTGGATCGA 58 9136420 9136641 GTCACTGAGATCGTCCTCC 59 NA InUTR Drosophila melanogaster 61 mRpL12 FBgn0011787 FBtr0076511 1 1 1 133 3L 8949924 8949942 CTGCTCACATAACCTGCTG 58 8950095 8950113 CACTGTACATGCGATGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137,FBtr0301913,FBtr0290105,FBtr0076565 3 5 5 84 3L 8928152 8928171 ATCATCGGGAACTACACCAC 59 8928030 8928105 TTGCTGTAAATCTGCCTGC 58 NA Drosophila melanogaster 61 CG34426 FBgn0085455 FBtr0112727 2 1 1 80 3L 8796307 8796328 CCTATTGCCAAGAGATCAACTC 59 8796365 8796452 GAACACAGTAGATGTAGCTAGTG 58 NA Drosophila melanogaster 61 Cp15 FBgn0000355 FBtr0076572 3 1 1 174 3L 8721631 8721720 AGTACCTGATTGTCTGCGT 58 8721858 8721876 GGATAGCTGTTGTAGCCAC 58 NA Drosophila melanogaster 61 CG6745 FBgn0035901 FBtr0076620 3 1 1 87 3L 8504066 8504084 GATTACGTGACCTTCCTGG 57 8504135 8504212 ATGGTCGTAAGTTCAGTCG 57 NA Drosophila melanogaster 61 CG6902 FBgn0035899 FBtr0076657 3 1 1 66 3L 8487232 8487250 TGAATAAGATGTCGCAGCG 58 8484529 8484547 AACGAAGAAGTTCTTCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 3 1 1 104 3L 8319395 8319413 TACTCCTTCAACTACGGCA 58 8319938 8319956 CTCAACCAGGGAGTACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32364 FBgn0052364 FBtr0076720 1 1 1 115 3L 8203499 8203519 GGTGAAGTTTACATTATGCGC 58 8203349 8203423 ATTGGCAGATATTGCATTGC 57 NA Drosophila melanogaster 61 CG7927 FBgn0027549 FBtr0076684 2 1 1 131 3L 8105696 8105716 AAATGCTCAGCTACAAGAAGG 58 8105809 8106124 TGCAAACCAGCTTCTTCTC 58 NA Drosophila melanogaster 61 CG12262 FBgn0035811 FBtr0076808 2 1 1 156 3L 7712545 7713165 GTTCCTCAACAAGCTTGCT 58 7713285 7713303 CTCACGGGTGAACTTACGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 1 4 4 80 3L 7509082 7509100 CCTTGGCACATGAGTTTCC 59 7509144 7509227 ACGATTACTCTGCTCTGCC 59 NA Drosophila melanogaster 61 sec63 FBgn0035771 FBtr0076847 3 1 1 94 3L 7356862 7356964 TGAGATCGGACTCGTATTTGG 59 7357020 7357038 CCACTGAGGATGATCCGTC 59 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691 2 2 3 60 3L 7323294 7323316 CGTCATAAACTGCAGAAGTATGG 59 7323330 7323413 CCAGAGATTTATAATCTTCCTTGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 2 2 2 111 3L 7315586 7315662 GTTGAAAGAATCCGTCAAGG 57 7315494 7315513 ATTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 1 1 1 96 3L 7233083 7233159 AAACAAAGTGACCTGCCTC 58 7233219 7233237 AATAATCGGCTGATCGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 1 2 2 80 3L 7061622 7061640 GTATGTGGTTCTCGACGTG 58 7061496 7061581 TACATCAGGAACATCATCACCA 59 NA Drosophila melanogaster 61 bin FBgn0045759 FBtr0076900 2 1 1 80 3L 6984895 6984913 ATGCGATCAAGGAATCACC 58 6984954 6985789 GAAAGAATTCGTAGCTCTTCTG 57 NA Drosophila melanogaster 61 CG32388 FBgn0250849 FBtr0076933 2 1 1 104 3L 6977516 6977534 CAAATCGCCGAAGGATTCG 59 6977367 6977448 GTGGGAACAACAGTTCTGC 59 NA Drosophila melanogaster 61 CG32398 FBgn0052398 FBtr0076988 2 1 1 66 3L 6362006 6362024 CCATAGAAATGCCGACCTG 58 6361958 6361976 ATAGATTGGGAGCCGAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10163 FBgn0035697 FBtr0077009 2 1 1 85 3L 6250836 6250911 TTCATGGAGGCTCTCATCG 59 6250769 6250788 AAATTACAATCGCCCTGTCG 59 NA Drosophila melanogaster 61 Best2 FBgn0035696 FBtr0077010 3 1 1 82 3L 6244729 6244750 CGGATATTCGTAGACGTTTAGG 58 6244588 6244686 CAGGGTGACTACCTGAGTG 59 NA Drosophila melanogaster 61 D19B FBgn0022699 FBtr0077017 3 1 1 113 3L 6177058 6177076 AACGACTTGCTACCCTTCC 59 6176903 6176921 ATGCATAGCCGATGTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 2 1 1 74 3L 5771741 5771759 ATGGATCTTCCTTCCAACG 57 5771623 5771705 TTTGTTTATGAACTCCTCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18808 FBgn0042131 FBtr0073361 1 1 1 60 3L 4806570 4806591 GACACCATTACTATTTCCTGCT 58 4806531 4806549 ATCTATCACGGCTGACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12493 FBgn0035571 FBtr0073363 2 1 1 81 3L 4753588 4753609 CAATCGATGATATGAAGGACCT 57 4753355 4753548 GTTTCCTTCAAGTCATCTGAC 57 NA Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 1 1 1 69 3L 4622736 4622754 ATGTGGATCGCATTCTGGT 59 4622785 4623282 AACTTCATTTCCTTAGCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 2 1 1 118 3L 4487444 4487522 AGGGCTATGACTATCCAATTCC 59 4487347 4487365 GTAGGAGTAGCCACTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1265 FBgn0035517 FBtr0073228 2 1 1 80 3L 4255723 4255813 AAACATGACTCGAATCTACACG 59 4255854 4255872 AGGAACGTCGAAATCAGGA 59 NA Drosophila melanogaster 61 Eip63F-1 FBgn0004910 FBtr0073174 3 1 1 83 3L 3913908 3913926 ACATGAGGACAGCAAGGAC 59 3913766 3913863 TCGAATACTCTAAATGCGGCT 59 NA Drosophila melanogaster 61 CG32262 FBgn0052262 FBtr0073184 2 1 1 60 3L 3809382 3809400 TGTCCTACATGAAGCACGA 58 3809340 3809359 GACGCAACTAACTTCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10858 FBgn0035458 FBtr0073190 1 1 1 141 3L 3751225 3753055 TCAATAGCGATTTCCTCTGTG 58 3748737 3748755 CGACTTCATCTCGAATGCG 59 NA Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 1 2 2 153 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324492 3324510 GGGTCGGTAGTACTGAGAG 58 NA Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 1 2 2 80 3L 3043322 3043343 ATTGTGAAGCTATCATTGTCCC 58 3043383 3043453 GCATACAAAGGTGAAGTCCA 58 NA Drosophila melanogaster 61 aly FBgn0004372 FBtr0073006 1 1 1 95 3L 3026047 3026066 TAGATGTTTCGGAGGACGAG 59 3025908 3025992 GGAAATTGTACAATCTCTTGCC 58 NA Drosophila melanogaster 61 CG32487 FBgn0052487 FBtr0073007 2 1 1 93 3L 3016370 3016455 TAGGAGACACCATGTGCAC 59 3016295 3016315 GCATCCTGATAGCTGTTAACC 58 NA Drosophila melanogaster 61 CG2113 FBgn0035384 FBtr0072979 1 1 1 148 3L 2995253 2995329 GCTGAAAGTCAGGAATCCC 58 2995441 2995459 TCTGGAAAGGTCCTCTTGG 58 NA Drosophila melanogaster 61 CG1143 FBgn0035359 FBtr0072937 3 1 1 183 3L 2645452 2645638 GTTGCTAACCACCTTGCTG 59 2645785 2645803 CTCCAGATCTCCGATCAGG 58 NA Drosophila melanogaster 61 Spn FBgn0010905 FBtr0072961 3 1 1 87 3L 2512851 2512871 TGCAGGCTTAGAGAAACTAGG 59 2512723 2512802 ATCGTTGACCTGAATGCGA 59 NA Drosophila melanogaster 61 DmsR-1 FBgn0035331 FBtr0072887 3 1 1 109 3L 2343650 2343670 GCTACTCCTCTTTCTCATCAC 58 2343740 2343860 TCAGGTCACTCAGTCTTAGG 58 NA Drosophila melanogaster 61 Cht2 FBgn0022702 FBtr0072795 1 1 1 95 3L 1753506 1753524 ATGTGCTACGACTACCACG 59 1753302 1753448 GGAGAATTTCACACTCAGCG 59 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 1 2 2 139 3L 1312656 1312733 AGTTTGGGTGATAGGGCAC 59 1312535 1312554 CGTATTTCTCGATGAAGGCG 59 NA Drosophila melanogaster 61 CG32318 FBgn0052318 FBtr0072732 2 1 1 60 3L 1246256 1246274 GGTGTTTGCTTATGGCCAG 59 1246214 1246234 CTCGATGTAAAGTGACTTGGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 2 2 2 82 3L 268392 268411 AGGAGAAGTATGGGAGGAGG 59 268456 268577 ATCGACAAGACAGACCGTC 59 NA Drosophila melanogaster 61 CG33229 FBgn0053229 FBtr0072499 1 1 1 66 3L 224594 224612 AGCTTAGTAGCCTCGACAG 58 224642 224660 TTGCATGTGTCTTGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 1 2 2 80 3L 197532 197602 TGAGGAGCTAGAGGTTCGT 59 197470 197488 TCATCGAATTCGATGCCCA 59 NA Drosophila melanogaster 61 5SrRNA:CR33437 FBgn0053437 FBtr0086429 1 1 1 60 2R 15622740 15622758 ATACATCGGTTCTCGTCCG 59 15622698 15622716 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp60F FBgn0259968 FBtr0300313 1 1 1 69 2R 21060173 21060191 CTCAGAAGCTTTGCTACCA 57 21060070 21060089 GGATGGACAGAATAAGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 1 3 3 134 2R 20853307 20853384 GTACTTCGGGAATTCAGTCAC 58 20853193 20853211 GGTACCGTTAGTTCGAGCA 59 NA Drosophila melanogaster 61 spz6 FBgn0035056 FBtr0072370 3 1 1 100 2R 20646312 20646393 TATCCCTTCGAACTTATTCGCA 59 20646454 20646472 ATGATCTGGGTGACCTTGG 59 NA Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 3 1 1 147 2R 20556619 20556694 CCGAATTTCCAGCTCTTACAC 59 20556492 20556510 TCACGTAGCTCTCGATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Fcp1 FBgn0035026 FBtr0072342 2 1 1 81 2R 20458012 20458030 GCAAGTTCTTCTCGCACAG 59 20457868 20457970 AACAGAGCCTTTAAATTGTCCG 59 NA Drosophila melanogaster 61 CG5398 FBgn0034882 FBtr0072071 2 1 1 83 2R 19490755 19490773 GAAACGGAAGGTTCCTCGA 59 19490819 19490902 CAGTTAGTTGAATCCCTGCG 59 NA Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072026,FBtr0072025 1 2 2 95 2R 19300605 19300623 AAGTACAAGTCCGTCCAGC 59 19300309 19300546 AATGGGAATATCGAGGGCC 59 NA Drosophila melanogaster 61 CG3520 FBgn0034859 FBtr0072027 3 1 1 80 2R 19286463 19286541 GATCTGTCAGGAGAAACCC 57 19286401 19286420 TCATCGGAGGAATGATTGAG 57 NA Drosophila melanogaster 61 CG9861 FBgn0034844 FBtr0072002 3 1 1 141 2R 19212398 19212416 ATTCGATACTTACCGCGGA 58 19212573 19212664 TGTGGAATCCGTCTTCTCTG 59 NA Drosophila melanogaster 61 CG3162 FBgn0034834 FBtr0072052 1 1 1 60 2R 19097713 19097731 CGCATAGTGATGACCTCGT 59 19097671 19097692 TTTATTGTAGATCATCCGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776,FBtr0071775 3 2 2 81 2R 18168313 18168331 GGAGCGAGATTGTTCAGAC 58 18168373 18168507 ATTATTAATGAGCCTCTGGCTG 58 NA Drosophila melanogaster 61 Fili FBgn0085397 FBtr0112593 1 1 1 115 2R 17817846 17821945 TAATCTCACGATGGTGCCT 58 17822024 17822042 GAAACAGGTTCAGGAAGGC 58 NA Drosophila melanogaster 61 CG17922 FBgn0034656 FBtr0071675 1 1 1 98 2R 17581648 17581728 CTTCTCCGCACTTTGTTCG 59 17581568 17581587 CCTGGTAGTCACTATAGGCG 59 NA Drosophila melanogaster 61 CG42496 FBgn0260222 FBtr0300625 2 1 1 70 2R 17579824 17579844 CGGATTTGTTGGTAATAGCCC 59 17579876 17579951 ATTATCGCAAATCCCGGTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG10307 FBgn0034655 FBtr0071671 2 1 1 95 2R 17576644 17576663 TACCAAATCTCCGACGTTCC 59 17576718 17576800 GGAGGATGGAATCTTTGTTAGC 59 NA Drosophila melanogaster 61 CG33225 FBgn0053225 FBtr0300405 2 1 1 92 2R 17478422 17478440 TTATCCATGGCCAATTCGG 58 17478496 17478570 TGACGTAGTCTGAGATCGA 57 NA Drosophila melanogaster 61 CG30283 FBgn0260477 FBtr0300950 1 1 1 189 2R 17427783 17427861 TCACAAATCGTTTCGTACTGAC 59 17427561 17427579 GAATAGTGCACTCGCTTGG 59 NA Drosophila melanogaster 61 CG15666 FBgn0034622 FBtr0300455 3 1 1 81 2R 17231183 17231266 CCTTCTTAAGTACCAGAGGCA 59 17231306 17231327 TGACAAATGCGATAGAACATGG 59 NA Drosophila melanogaster 61 CG10505 FBgn0034612 FBtr0071619 2 1 1 80 2R 17174518 17174597 AGGATTGAGAGCTTAACACG 57 17174457 17174475 CATGGACCTAATGGTCGAG 57 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629,FBtr0113100 2 2 2 80 2R 17054330 17054405 ACGTAATGAAGGGAAATGCTG 59 17054270 17054289 CCTTGTTAAGGTCCATGCTG 59 NA Drosophila melanogaster 61 rig FBgn0250850 FBtr0086252 2 1 1 80 2R 16522510 16522528 AAGTCGGTGCTCATATCGA 58 16522389 16522467 CTTCAGATTGGTCAACTCGG 58 NA Drosophila melanogaster 61 rig FBgn0250850 FBtr0086252 1 1 1 80 2R 16522511 16522529 CAAGTCGGTGCTCATATCG 58 16522390 16522468 TTCAGATTGGTCAACTCGGT 59 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495,FBtr0100496 1 2 2 80 2R 16439322 16439410 GCAAATAATTTGGGTTCTGTGG 58 16439204 16439222 GTTCTTCAGGGTTTGGTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10444 FBgn0034494 FBtr0086305 3 1 1 80 2R 16160695 16160773 TGGAGACTATGGGTCAATATCC 58 16160636 16160655 ACGAAATCGTGGAAAGACTG 58 NA Drosophila melanogaster 61 Obp56a FBgn0034468 FBtr0086476 1 1 1 92 2R 15585327 15585585 TTGGATCGTCCCTTAATCTG 57 15585640 15585658 CCTCCTCGGTAAGTTTCAC 57 NA Drosophila melanogaster 61 hpo FBgn0261456 FBtr0086500 3 1 1 184 2R 15383114 15383132 CATGATAGCGCATGCAGAG 59 15382891 15382968 AGTTGATTACCATAGTGCCCA 59 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 2 3 3 80 2R 15314247 15314266 CTTCGAACGAGTCTCTTCAG 58 15314307 15314388 GATTCTCGGCAATTTCATGAG 57 NA Drosophila melanogaster 61 CG10476 FBgn0034426 FBtr0086562 2 1 1 71 2R 15172266 15172289 AGAGGTATCTTGGTCATACTTTCC 59 15172218 15172236 GATGAACAGACGGAGTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rib FBgn0003254 FBtr0086512 2 1 1 60 2R 15163649 15165376 TATTTCGTGGCAACCAGGT 59 15165400 15165418 GATGCTTCCTGACCTTGAG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290311,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 3 12 12 98 2R 15059778 15059864 CTGATATGCTCATCACCTTTGAC 59 15059922 15059940 CCTTGTAGTGGGAGGTCTC 58 NA Drosophila melanogaster 61 Jheh1 FBgn0010053 FBtr0086625 1 1 1 107 2R 14742284 14742359 ATCCGGATAAGACCATTGCT 59 14742196 14742220 GGTAATTCGTATTGAATCCGTACTC 59 NA Drosophila melanogaster 61 CG15100 FBgn0034401 FBtr0086627 2 1 1 100 2R 14737791 14737900 CCTAAATGACGCTAAGTACAAGG 59 14737713 14737731 AAAGGTACTTGGCAATGGC 58 NA Drosophila melanogaster 61 Spn6 FBgn0028983 FBtr0086733 1 1 1 242 2R 14014788 14015373 GAGAAACTGAAGCAGCTGG 58 14015574 14015597 CTTCTTATTCCAGATGACGTAGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10911 FBgn0034295 FBtr0086808 3 1 1 108 2R 13941135 13941153 TCCAGTGCTACAGTGAAGC 59 13940749 13940767 TTGATGAGACGCACTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299707,FBtr0300541,FBtr0300540,FBtr0299706 3 7 7 98 2R 13722164 13723261 AAAGGGAGTTAAGGGCCTG 59 13723321 13723341 ACCTTTATCTGACAGTAGCCG 59 NA Drosophila melanogaster 61 CG6362 FBgn0028740 FBtr0089556 1 1 1 94 2R 13659985 13660003 GGTCGTGGTCTTATGGAGG 59 13659750 13659927 TCGGCATCAAAGCAATTCC 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298,FBtr0086994,FBtr0086992,FBtr0301482,FBtr0086991,FBtr0290299,FBtr0086993 2 7 7 69 2R 13153663 13153681 AACAACTTCAACTTCGCCA 58 13153711 13162930 GCTGAGTTTACATTATCTTCGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298 1 1 7 80 2R 13249533 13249552 GGCATTCCAGTTTATCAGCC 59 13249593 13250264 AAGACTATCGCATGAGACTGG 59 NA Drosophila melanogaster 61 Cda9 FBgn0034197 FBtr0086984 2 1 1 97 2R 13016475 13016493 GTGCAAATTACCCGATTGC 58 13016554 13016678 AAGTGATGGTCACGAACTG 57 NA Drosophila melanogaster 61 CG30459 FBgn0050459 FBtr0087015 2 1 1 148 2R 12921028 12921046 GTTCTGAACGTTATGGCGA 58 12920833 12920919 ATGATGTTTCGTTAAGTCGTCC 59 NA Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112692,FBtr0112691 3 2 2 73 2R 12837575 12837657 GAATCCTTTCTCCTGTAGAGAC 57 12837523 12837543 AGTTTCCGTATATTCTCCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG15709 FBgn0034100 FBtr0087186 3 1 1 150 2R 12142418 12142733 AATATGGCTACAACCTCTCCA 58 12142288 12142306 CCACTAATCTCCTCCAGCG 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 3 1 1 61 2R 11879534 11879608 AATTACTCCGCTTTGGTAAGTG 59 11879494 11879513 ATGGTGAATGGTCTTCAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Poxn FBgn0003130 FBtr0087311 3 1 1 196 2R 11715573 11717683 CAGCAAGACCAAGCAAGTG 59 11715395 11715413 TCATCTCATCGGTCCACAG 58 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 3 2 2 82 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454667 11454756 CGAATCCTGATCGATTCAGC 59 NA Drosophila melanogaster 61 CG30470 FBgn0050470 FBtr0087326 3 1 1 60 2R 11348979 11348999 TACTGCATTTGATTCCCACTC 58 11349018 11349039 GATACACAGAACACGGTAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fs FBgn0259878 FBtr0087398 1 1 1 147 2R 11124039 11127084 TATGAAACCAGTGCGTTTGC 59 11123911 11123932 CTGCGCTTGAATTTGTAATTCG 59 NA InUTR Drosophila melanogaster 61 mRpL41 FBgn0034001 FBtr0087400 3 1 1 60 2R 11104763 11104783 AGCCATACGTGTCCTATAAGG 59 11104723 11104742 AGATCCAAGCTGGTGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8503 FBgn0033917 FBtr0087536 2 1 1 89 2R 10131564 10131640 ATCCATTCAAGATCGCCCA 59 10131692 10131711 CCTCCTTCAGGACTATCTCG 58 NA Drosophila melanogaster 61 CG6553 FBgn0033880 FBtr0087642 2 1 1 80 2R 9742419 9742494 TTCCTTACTGTGAAACACCC 57 9742358 9742377 ACACCAATACCACGATTAGG 57 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 2 2 2 116 2R 9741672 9741690 CTAAGATCTTCGCTAGCCG 57 9741378 9741396 CGGTCTTGATGTACTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG13340 FBgn0033868 FBtr0087649 1 1 1 60 2R 9665927 9665951 CTATCTAACTAAGAAGCGTATGACC 58 9665891 9665910 GTAGACGAACTGAACAAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 3 12 12 89 2R 9306577 9306659 TGCAAACTCGTACATAATACCG 59 9306509 9306527 CATCACTTCGGAGATGTCG 58 NA Drosophila melanogaster 61 Cpr49Ah FBgn0033731 FBtr0087924 1 1 1 107 2R 8301571 8301810 AAGTGCTCATACTTCTTGTGC 59 8301879 8301897 GATCTGGTTTGTCATCGCG 59 NA Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 2 1 1 283 2R 8112747 8113224 TACAATGGCTTTGGAGGCT 59 8112482 8112504 GAAGCATAGGGATTACAGTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Egm FBgn0086712 FBtr0088090 3 1 1 192 2R 7505336 7505416 TACAACTGCAAGACCTGGAG 59 7505163 7505181 AGATTCTGGGAGGCAATGG 59 NA Drosophila melanogaster 61 kappaTry FBgn0043471 FBtr0301671 3 1 1 60 2R 7226025 7226046 TAATGAGTCCAGCTATATGCAC 57 7225986 7226004 GATCAATGCCTGTTCCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13215 FBgn0033592 FBtr0088192 1 1 1 60 2R 7127395 7127413 GGATATTACCGGAGAGCCA 58 7127353 7127371 GTCGCCCTGGTAGTAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34224 FBgn0085253 FBtr0112417 2 1 1 60 2R 7124914 7124932 GAACCGAGAAGCAAACACC 59 7124872 7124893 TTATTGCTTTCTGGTACCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb5 FBgn0033571 FBtr0088237 3 1 1 60 2R 6786213 6786231 CGAAGATCGGCATCAAGAC 58 6786171 6786189 TGGATGTTCTCTTCCTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mat1 FBgn0024956 FBtr0088255 2 1 1 60 2R 6626963 6626984 ACTACAATAAACGTGAGGAGGA 59 6626924 6626946 TCCTCCAGATAGTCATTGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12897 FBgn0033517 FBtr0088317 2 1 1 177 2R 6300372 6300390 ATTCGGGATCGATACACCT 58 6300083 6300101 TGATCCAGAAGATGCCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088356 2 1 2 80 2R 6242938 6243020 ATACGATCTTCTTAGTCGAGTC 57 6242879 6242897 CACTGAGCTATGTCAGAGC 57 NA InUTR Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 3 2 2 83 2R 5955388 5955459 GGGCTGCATTAAAGTTGCT 59 5955323 5955343 AAAGTAACCATCTGTGGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG1690 FBgn0033442 FBtr0088496 1 1 1 120 2R 5645242 5645329 AAGAACAAGGAGACCCAGAC 59 5645141 5645159 GTGGGATCATGGGACTAGC 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 3 5 5 80 2R 5066384 5066405 AGGAAGATCTAGACTCCAAGGT 59 5066245 5066343 CCTGGTCGCATTTATTGGC 59 NA Drosophila melanogaster 61 Rad51C FBgn0033389 FBtr0301527 1 1 1 80 2R 5053474 5053554 GATACAGGAATCGAAGAGTTGG 58 5053595 5053613 ACAGAGTTCCCAGACTCTG 58 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 3 1 1 77 2R 4793083 4793165 CACAATTGTGGCCTTCAGG 59 4793024 4793042 AAGTTGTCGGTAGCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718,FBtr0088720,FBtr0088719 3 3 3 88 2R 4607211 4607230 ATCTACGGAACCATCAAGGG 59 4606986 4607161 GCGGTGAGAGTTGTAATAGC 58 NA Drosophila melanogaster 61 CG14743 FBgn0033326 FBtr0088722 3 1 1 80 2R 4598791 4598968 CACTAGTTGAGACTATGCTGG 58 4598731 4598751 GTAGTGACCATATTGCCATCC 58 NA Drosophila melanogaster 61 Jon44E FBgn0001285 FBtr0088704 2 1 1 63 2R 4579133 4579151 TACATTGTCGGACTGAGCT 58 4579178 4579196 TGTGGTCGATGATGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14749 FBgn0033316 FBtr0088695 1 1 1 60 2R 4516642 4516660 ACTTCTGTTCACCCAGACC 59 4516683 4516702 TGGACTGATACAGTGCTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LvpD FBgn0002569 FBtr0088747 3 1 1 182 2R 4342483 4342501 AGTCCCGAATATCAACGGT 58 4342645 4342726 CTTGTTTGTGCGAATGATCTG 58 NA Drosophila melanogaster 61 CG18449 FBgn0033285 FBtr0089732 2 1 1 62 2R 4255144 4255162 CACAATCACAGATGCAGCC 59 4255100 4255118 GACCTGGCCTGTATTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 3 2 2 119 2R 3718956 3719036 TCTACCAAGTGGAGTACGC 58 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 Rpt1 FBgn0028687 FBtr0088947 1 1 1 60 2R 3541239 3541259 CGACATTGAGCTTCTAAAGAC 57 3541199 3541219 GATGCTCTTGATGGATTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1360 FBgn0033195 FBtr0088951 1 1 1 85 2R 3477154 3477172 ATTTGCTGTGGAACTGTGC 59 3477027 3477110 CCTACAGGTGGTTATGTAATAGGA 59 NA Drosophila melanogaster 61 CG30502 FBgn0050502 FBtr0300959 3 1 1 81 2R 3334682 3336937 GACGATAGTATGGAGCACCT 58 3334620 3334638 ACTCATCGTAGCAATCCGT 58 NA Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 3 2 2 81 2R 3278703 3278723 CAGTTACTCGTCGTAGATGCT 59 3278580 3278660 CGGATGCAAACGATGTCAG 59 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 3 1 1 203 2R 3167668 3167749 TCAACCCACTGCTTCAGAG 59 3168060 3168078 ATGGTAGTGTGCTTGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131,FBtr0086127,FBtr0086129,FBtr0086130,FBtr0300285 3 5 5 161 2R 2642342 2642416 CAAATCAGGTGATGGATATGC 57 2642600 2642620 CAGTCGCATATAAGATGTCCA 57 NA Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 1 1 1 60 2R 2495564 2495641 TTCGGTACAAAGTCGTTGC 58 2495522 2495542 GATACCACAATACCAGTCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 2 2 2 85 2R 1963608 1963683 CTTTAAACACCTGGTGCCTG 59 1963542 1963560 GGGAATCCTTATCCAGGGC 59 NA Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111292,FBtr0111291 3 2 2 166 2R 559596 559615 AACACAAAGCATTTCAGCTC 57 559802 559820 CTCCAACCGTTTCTTGAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33509 FBgn0053509 FBtr0091449 1 1 1 80 2L 21085583 21085655 CTGCAAGCTCTTTCCAACG 59 21085521 21085545 CTTAATGTTCTCCAGTACCATTAGG 59 NA Drosophila melanogaster 61 CG9336 FBgn0032897 FBtr0081427 2 1 1 99 2L 20859305 20859323 GGCCGTTATGATCAGTCTG 58 20859777 20859795 ATCAGCCTCGAACTTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34007 FBgn0054007 FBtr0100062 2 1 1 81 2L 20495230 20495306 AAATACGTGCTGCCTACAG 58 20495351 20495369 AGGACGAAACACATTTGGG 58 NA Drosophila melanogaster 61 fok FBgn0020303 FBtr0081342 1 1 1 75 2L 20084611 20084629 GAGTCCACCACTTCCTCAC 59 20082992 20083011 CGGACTTTATCTGCTTGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 3 2 2 81 2L 20074332 20074787 CGGACACAACTATACAGTTGAG 58 20074272 20074290 CAGCTCGGTGATGTTTAGC 59 NA Drosophila melanogaster 61 CG10268 FBgn0032811 FBtr0081266 3 1 1 60 2L 19580067 19580086 GGATTACATATCCGAGAGGC 57 19579923 19579942 GATTCGAACGATACACGACC 58 NA DesignNoJunction Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271 1 1 7 73 2L 19572161 19572179 ATTCCTCACAACATTCCCG 57 19571731 19571752 GCTCTTCTCGTTTCTGTATGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081169,FBtr0081170 3 2 2 94 2L 19080486 19080569 CCAACATAGATCAAGCGGTC 58 19080411 19080429 ATCGTTGCTCAGATCGGAG 59 NA Drosophila melanogaster 61 CG10700 FBgn0032754 FBtr0081171 3 1 1 60 2L 19078050 19078068 TTGGGCGAGTTGATAGGAC 59 19078008 19078030 GCAAATCTACCTTATTCTCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ncm FBgn0086707 FBtr0081088 2 1 1 108 2L 18448330 18448348 GACCACCAATGGAAGTAGC 58 18448084 18448260 TTCGTCTTTGTCGGTTATCTC 58 NA Drosophila melanogaster 61 CG7180 FBgn0032673 FBtr0081061 1 1 1 263 2L 18184528 18184546 AAATCGAGGGAACGAGAGG 59 18184061 18184079 CTTTCCAGTCTTACCACCC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 3 2 2 91 2L 18081785 18081862 ATTATGAAGGCCTTGCCGT 59 18081911 18081935 CAAAGATACATGTAGACATACACCG 59 NA Drosophila melanogaster 61 Sytalpha FBgn0261089 FBtr0080987 3 1 1 81 2L 17601831 17601922 CTTGTATAGAAGTCATTCTCAGCC 59 17601959 17601980 AAGACTCACATGCAAATTACCC 59 NA Drosophila melanogaster 61 CG13283 FBgn0032613 FBtr0080928 3 1 1 60 2L 16835816 16835834 TCGTATCGCCTTATGTGGA 58 16835774 16835795 AAGTGCCTCAAGAAATATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17928 FBgn0032603 FBtr0080908 1 1 1 80 2L 16791855 16791947 GATTACCAGTGAAAGCTGGC 59 16791988 16792008 TAGAGCGTATCGTTAATTCGC 58 NA Drosophila melanogaster 61 CG33552 FBgn0053552 FBtr0091522 1 1 1 60 2L 16682857 16682876 GAAAGAAGATCGCCGAAGAG 58 16682898 16682917 CCGGTAACCTCATAATTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lace FBgn0002524 FBtr0080738 1 1 1 95 2L 15503140 15503158 AATGTGGATCCGAAGGAGG 59 15503215 15503299 AATCAGTTTCTTGGATCCAGC 58 NA Drosophila melanogaster 61 CG33679 FBgn0053679 FBtr0091659 1 1 1 102 2L 15058616 15058634 TCTACACCGCCTTTATGCC 59 15058761 15058781 TTGGCAAACATACGATCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 2 1 1 60 2L 15009375 15009450 GCTCTCAATGTGATGAATGCT 59 15009335 15009355 GGACAATATCCCGAAACTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 elB FBgn0004858 FBtr0080637 1 1 3 118 2L 14391933 14392241 ATTATCCACCCGGTTACGG 59 14391833 14391851 GGCGTAGTTCAGATACGGA 59 NA Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 2 2 2 80 2L 13908723 13908741 CAATGTGGAGTTGCCTCTG 58 13908785 13908870 ATGGACAGCATGTTGTGGA 59 NA Drosophila melanogaster 61 CG33641 FBgn0053641 FBtr0091618 3 1 1 118 2L 13529323 13529344 GGATGGATGTCTTATACTCCGA 59 13529420 13529500 AGGTAAAGTTCGCTTTAAAGGG 59 NA Drosophila melanogaster 61 CG5204 FBgn0032473 FBtr0080433 3 1 1 70 2L 13162327 13162345 TATTGCGGCGTAGAAACAG 58 13162435 13162454 AAATCTTCGGGTTCCTCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 kek1 FBgn0015399 FBtr0080401 2 1 1 143 2L 12819348 12819366 GAACCATCAGAAGCAGGAG 57 12818960 12818981 GTTTAGTCAGTTCTTGGTTTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Oatp33Ea FBgn0032433 FBtr0080384 2 1 1 80 2L 12442802 12442822 TCTTGGGACAGATCTCATACG 59 12442675 12442760 TCGTCAGGTTAAGCTGTCC 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0100125 2 1 4 128 2L 12404108 12404444 GCCATCATTACTCCGAATTCG 59 12404000 12404018 GTCTGATCTCCTCTCGCAG 59 NA InUTR Drosophila melanogaster 61 CG16964 FBgn0032385 FBtr0080282 2 1 1 157 2L 11947988 11948006 ACCGAATTCGAGCTCAGAG 59 11948197 11948215 TTTCTTCGGAACTTGCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14929 FBgn0032365 FBtr0100456 2 1 1 60 2L 11518902 11518921 TTCAGAAGCACATTACTGCG 59 11518943 11519019 TTTCCGTTACAAAGCGAAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 salm FBgn0004579 FBtr0089913 2 1 1 82 2L 11436265 11436285 TGAAGCAACACATGCTAACTC 59 11435916 11436225 CTCACTCATATACTTTACGGCAC 59 NA Drosophila melanogaster 61 CG4751 FBgn0032348 FBtr0080200 1 1 1 80 2L 11131613 11131684 GTGAACTGGATGCTGAACG 59 11131727 11131746 TCGAAACGGTATTATGTGCG 58 NA Drosophila melanogaster 61 CG5322 FBgn0032253 FBtr0080042 3 1 1 82 2L 10454189 10454264 CACCGATGAGAAAGGTCGT 59 10454125 10454145 CATTAGGTCGATGTTCCAACG 59 NA Drosophila melanogaster 61 trk FBgn0003751 FBtr0080078 3 1 1 60 2L 10271796 10271815 GAATCGATGGGTTCAAGCAG 59 10271755 10271776 AAGTCAATCCAGTTGATCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5676 FBgn0032200 FBtr0080086 3 1 1 80 2L 10255129 10255149 GATAAGAGCGTGGATAAGCTC 58 10255006 10255089 TCTTTCGGTCTTATCCTTCCA 58 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 1 2 2 80 2L 10236972 10236993 GGAACCGATTTCAAATTTGAGG 58 10236534 10236933 AACAATACCGAAATCTGAGGG 58 NA Drosophila melanogaster 61 CG31714 FBgn0032180 FBtr0113032 2 1 1 81 2L 10065303 10065621 GGCAGCTGACAGTATAATTGG 59 10065242 10065261 CTGCAGCGGAACATAATGAG 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 2 2 2 86 2L 9940568 9940649 ACTAAACTCAACAGAAATGGCC 59 9940695 9940714 ACCTTGGATTCTTCTCCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Srp54 FBgn0024285 FBtr0079875 3 1 1 60 2L 9914492 9914510 CTGAGGTTAAGAGCTCACG 57 9914534 9914552 TCGACACTAACCGATTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc30E FBgn0053300 FBtr0302413 2 1 1 154 2L 9903055 9903195 TGCTATGCCATTTATTCTGTCG 59 9902922 9902944 GGATTTATCCAGCAGTAATCAGG 59 NA Drosophila melanogaster 61 FKBP59 FBgn0029174 FBtr0079872 3 1 1 81 2L 9889398 9889470 AGCAGGAGTGTAATGAGGT 58 9889514 9889533 ATAGTCAAGTTGCATTGGCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0100236,FBtr0079916,FBtr0079914 1 3 6 195 2L 9825735 9869533 AGAAAGCTGTCAAGGACCTC 59 9815904 9819296 GTTCCACTCCAACGAAAGC 59 NA Drosophila melanogaster 61 CG13116 FBgn0032139 FBtr0079863 2 1 1 60 2L 9730321 9730341 GAATATCGATGTCGTGGACTC 58 9730361 9730381 TATCATCTTCGGAGTCGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pelo FBgn0011207 FBtr0079847 3 1 1 81 2L 9702052 9702071 AAGAAACATGTCCTCCAAGC 59 9702114 9706650 CGTCTTGGCATCTAAAGAGG 59 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 2 3 3 82 2L 9549659 9550215 CCACAGGTTAAGGACTGGT 59 9549595 9549613 ACAAATAGAAGCGCCAACG 59 NA Drosophila melanogaster 61 CG34182 FBgn0085211 FBtr0112375 3 1 1 60 2L 9437058 9437077 AAGATGCAATTCATGCGGAC 59 9437098 9437118 CGAAATCCACGATATCTCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aldh FBgn0012036 FBtr0079806 2 1 1 124 2L 9390129 9390256 ATCTTGCCAGTCTGGAGAC 59 9390344 9390362 CTTGCCATGGTTCTTGTCC 59 NA Drosophila melanogaster 61 CG17005 FBgn0032109 FBtr0273186 3 1 1 81 2L 9327952 9328023 AATAACGGGCTTGAATCGGA 59 9328067 9328085 GTGGATCTGGCGAATAGGT 59 NA Drosophila melanogaster 61 CG9466 FBgn0032068 FBtr0079742 1 1 1 80 2L 8775078 8775160 CTGATCAAGTACGTCAACGA 57 8775017 8775035 GTTCAAGTAGCAAGTGGGT 57 NA Drosophila melanogaster 61 CG9463 FBgn0032066 FBtr0079744 3 1 1 88 2L 8768647 8768668 TGAGTTCTGTAAAGAACTTGGC 59 8768522 8768602 GGGACATGACTCATAACAAACAG 59 NA Drosophila melanogaster 61 CG9289 FBgn0032058 FBtr0079751 2 1 1 90 2L 8682023 8682110 CTGATCGATCTTTGCAGCA 58 8681951 8681970 GGTAAGTGCTATTGGGAAGC 58 NA Drosophila melanogaster 61 CG8498 FBgn0031992 FBtr0079640 2 1 1 149 2L 8162226 8162319 GAATTGCAGGAATTCAACCAG 58 8162038 8162056 CTTGAAGTCCAGAAAGCCG 58 NA Drosophila melanogaster 61 LKR FBgn0025687 FBtr0079495 2 1 1 100 2L 7795645 7795785 GACAACGTCATAGTCGAGTG 58 7795564 7795582 CTTGACCAACTTCTGGACG 58 NA Drosophila melanogaster 61 Acp1 FBgn0014454 FBtr0079500 2 1 1 111 2L 7741353 7741489 ACAGCACCATGAAATTCGC 59 7741260 7741278 TAGGACAGTCCATGTCCAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Cyp4d21 FBgn0031925 FBtr0079471 2 1 1 88 2L 7606644 7606664 TTTACTGACAAGGTCATTCGC 59 7606714 7606792 TCGTCTCCCATTATCAGCG 59 NA Drosophila melanogaster 61 CG15818 FBgn0031910 FBtr0079442 1 1 1 60 2L 7411010 7411028 GATCCCTGATAGAAGCCCA 58 7411047 7411070 TTGGGAGGATCTGATAATAGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0110799 2 1 2 81 2L 7209393 7209413 CTCTATATCCACAGAAGCGGG 59 7208565 7209355 GTATTTGAAGTCCAGGTCATTGAG 59 NA Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079429,FBtr0079430 3 2 2 65 2L 7026745 7026765 GAGGATGTGTTAGACAACTGG 58 7026612 7026633 CTTTGTTTGCAGAGTCATAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 nrv1 FBgn0015776 FBtr0079384 3 1 1 137 2L 6780279 6786290 AAAGTTGGAGTCAGCTACTG 57 6780161 6780179 CTATCAGCGAGTCTTGCAG 58 NA Drosophila melanogaster 61 CG11322 FBgn0031856 FBtr0290242 3 1 1 60 2L 6759106 6759125 GTTTACGATATGAAGCCGGA 57 6759065 6759085 CATGGGATGAATTGACGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079174,FBtr0079173 2 2 2 60 2L 5970474 5970494 GACTTCCATTTACAGAACGGG 59 5970515 5970534 TGTGTTTGGAACAGTTCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lam FBgn0002525 FBtr0079100 3 1 1 85 2L 5544665 5544683 TCGAGAAGGAGCTCATTCG 59 5544732 5544815 CAGGGAGACCTTGATGTCC 59 NA Drosophila melanogaster 61 Trip1 FBgn0015834 FBtr0079053 1 1 1 107 2L 4966956 4967031 CATCACAGGTCACGATAATGG 59 4966869 4966887 AACTGCATGTCGTTGATGC 59 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 1 2 3 81 2L 4879192 4880392 CTCGCATACATACAGGAGAG 57 4879130 4879148 TGCTTGGTCAGATAGTCCT 57 NA Nonspecific Drosophila melanogaster 61 CG11927 FBgn0031638 FBtr0077386 2 1 1 60 2L 4847889 4847907 AGGATTCCAAGGAAGTCGT 58 4847931 4847949 TTCAGCGGCTTAGTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11929 FBgn0031620 FBtr0077377 3 1 1 141 2L 4682860 4682881 TTGACAGCACAGCAAATTAGAC 59 4683038 4684523 CCATGGAAGCATCAGTGGA 59 NA Drosophila melanogaster 61 RpL27A FBgn0010410 FBtr0077452 2 1 1 88 2L 4457497 4457748 GTTAAATTCGGCTACTACAAGC 57 4457430 4457451 GCCTTCTTAGAGAAGTACTTGG 58 NA Drosophila melanogaster 61 CG3652 FBgn0031600 FBtr0077460 1 1 1 93 2L 4393423 4393509 ACGAGATTGGGACCTTTGG 59 4393348 4393366 GTTGTCAGACATGCTGTCG 59 NA Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077463 1 1 2 146 2L 4382639 4382710 AAACAAACGACTAGGGCGA 59 4382511 4382529 TGGTCCCTTATGCTTGGTG 59 NA InUTR Drosophila melanogaster 61 CG15425 FBgn0031591 FBtr0077471 1 1 1 66 2L 4258163 4258240 CATAGTGCTTGCAAACGGG 59 4258270 4258288 TACTCATGTACGTGGGACC 58 NA DesignRelaxed Drosophila melanogaster 61 Sfp24Ba FBgn0259951 FBtr0300296 2 1 1 177 2L 3668408 3668479 AATCGAATGCCGATTGTGG 59 3668249 3668268 TAACCCTTGCATTTGAGCTC 58 NA Drosophila melanogaster 61 CG15400 FBgn0031463 FBtr0113017 2 1 1 81 2L 2814849 2814870 GGCATTGTCAGTGTACTATGTG 59 2814739 2814809 TGGACACCATTTAAATGCCTC 59 NA Drosophila melanogaster 61 CG15386 FBgn0040715 FBtr0077842 1 1 1 185 2L 2216948 2217020 GAATCGAGAGTTTCGTCAGC 59 2216782 2216806 GGACTTAAAGTAGGGATTACTAAGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15385 FBgn0031397 FBtr0077845 3 1 1 81 2L 2211712 2211785 ACTTGGTCAACAGGTATCG 57 2211649 2211668 ACCTTGTTCCAGTACATGTG 57 NA Drosophila melanogaster 61 CG7261 FBgn0027509 FBtr0077829 3 1 1 118 2L 2150787 2150862 GAATCTCTTATCAAGTATGCCTCC 59 2150937 2150957 TCGTTTAGTAGATGCTCCTCG 59 NA Drosophila melanogaster 61 CG15362 FBgn0031378 FBtr0077814 2 1 1 60 2L 1981795 1981815 ACAAGATCAGCTTTATGCCCT 60 1981890 1981908 AATTCCCGAATCGCATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15356 FBgn0031377 FBtr0077869 3 1 1 61 2L 1976938 1976956 AAGGGAGAGTAGTGAGCAG 58 1976799 1976913 GGTGCAGCTCAATTATGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 3 2 2 118 2L 1851266 1851702 GCTAATTGTGGTGTCCGAG 58 1851784 1851802 AGTTGGAGTAGCACACTCC 59 NA Drosophila melanogaster 61 CG5561 FBgn0031333 FBtr0077947 1 1 1 80 2L 1353831 1353898 TGCTGTCTTTGATACTCGC 58 1353769 1353790 ATGTCTGGTATCCTCTTATCGT 58 NA Drosophila melanogaster 61 CG3415 FBgn0030731 FBtr0074209 1 1 1 84 X 16166186 16166204 CTCTTCAACGAGCTGAAGC 59 16166249 16166566 TATAGCTACCATTATCCTCGCA 58 NA Drosophila melanogaster 61 CG6048 FBgn0029827 FBtr0070863 1 1 1 82 X 5846976 5847251 CCATTGCTTTGTGGATCAG 57 5847297 5847315 GATCCAGGTTACCCATCAC 57 NA Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 2 1 1 81 X 925025 925103 CAAGGCTATCATGCACATGG 59 925147 925165 ATTCACTCCGGGAATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17195 FBgn0039369 FBtr0084921 2 1 1 60 3R 21602724 21602745 CATTGCTTACAAGCTCTACTGG 59 21602685 21602705 GTTACCAAGTATGTTGTGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HDC15381 FBgn0086610 FBtr0113461 3 1 1 127 3R 20202746 20202817 ACAAACAAGATTGTCGCTGG 59 20202905 20202925 AAACTCCACCAGTAAATTGGG 58 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 1 5 5 80 3R 14587368 14587390 GTTTGTATCCAGGGAACTATCTC 58 14586863 14587330 AAAGTTGAGACGTCCATTGTC 58 NA Drosophila melanogaster 61 CG34282 FBgn0085311 FBtr0112478 2 1 1 88 3R 14520989 14521079 TGTACAAGGTTTCGATCATCTG 58 14521128 14521146 CTCGGCATAGATGTCTTGG 57 NA Drosophila melanogaster 61 CG5608 FBgn0038058 FBtr0082680 3 1 1 80 3R 8290249 8290337 CTTCTAAAGGACATTGTCACGG 59 8290190 8290208 ATAGATGTGCTCCCTCAGC 59 NA Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 2 2 2 83 3L 20835435 20835506 CAACATGTTAGAGCCGTGC 59 20835553 20835571 CAACTACAGTGGAGCTCCA 59 NA Drosophila melanogaster 61 Ir76b FBgn0036937 FBtr0074869 3 1 1 80 3L 20103371 20103391 ATATCCTCACGAAGAACAAGC 58 20102839 20103329 AGGATTCATTGGTCGTTCG 58 NA Drosophila melanogaster 61 gk FBgn0020300 FBtr0075126 1 1 1 90 3L 18136726 18136744 CAAGATGCTCTGCGAACTG 59 18136794 18138034 CATTGTTGGAGATCTGATCAGTC 59 NA Drosophila melanogaster 61 CG33061 FBgn0053061 FBtr0113448 2 1 1 83 3L 16323171 16323189 AACCTGCTCTTGGGTAGTC 59 16323235 16323359 GATGCAGTACCAGATCAACG 58 NA Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 1 2 2 88 3L 9835628 9835646 CTGTGATATACCGCTCCAG 57 9834654 9835577 TGTGCACAATCTTAAAGCAG 57 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 1 2 5 80 3L 8574884 8574903 AAGCAAATAGGGCAATTCCC 58 8574946 8579079 GTAGCGACACAATCACTGG 58 NA Drosophila melanogaster 61 CG8270 FBgn0035703 FBtr0076967 3 1 1 97 3L 6481880 6481900 TCCACTACATTGAGCTAACCC 59 6481956 6482038 AGCAAATATCTGCTTGTTGGAG 59 NA Drosophila melanogaster 61 CG14969 FBgn0035440 FBtr0073082 3 1 1 80 3L 3333682 3333752 TGAGCAGGAACCTGAACTG 59 3333620 3333639 GGATCCTCTGTTGAAGTGGA 59 NA Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 1 2 2 86 2R 16502070 16502088 TTCAAATGCGTACACTGCG 59 16500968 16502023 GCAATAGACCTCTTTGTCATCC 59 NA Drosophila melanogaster 61 CG10910 FBgn0034289 FBtr0089630 1 1 1 80 2R 13908199 13908217 AAAGGGAGTTGGTTACGTG 57 13908259 13908347 AGAGATTCAGAACGGTATCCA 58 NA Drosophila melanogaster 61 Sobp FBgn0033654 FBtr0088064 2 1 1 61 2R 7717931 7725408 AGATAAAGGAATTCGCGCA 57 7717888 7717906 ACCCTCGAATCCATACCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9257 FBgn0032916 FBtr0081465 2 1 1 60 2L 21103234 21103253 ACCACTACATTTGGGTACGA 58 21103273 21103294 TCATTATCAAGGCGTAATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12264 FBgn0032393 FBtr0080290 1 1 1 202 2L 11999846 11999923 CATCCAAAGAATTCCGGGAG 58 12000088 12000106 TACAGCGGACTCTGTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 2 1 1 60 2L 11935226 11935321 AGATAATACGCCTACTTCGCA 59 11935343 11935361 CTAGAAAGGAACTGGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 1 3 3 82 2L 9549654 9550211 AGGTTAAGGACTGGTTTGTG 57 9549591 9549610 GTAGACAAATAGAAGCGCCA 58 NA Drosophila melanogaster 61 CG14005 FBgn0031739 FBtr0079160 3 1 1 138 2L 5801783 5801801 ATGCCATACCCTCCTACAC 58 5801600 5801684 CGATCGTTCAAATACTTGTTGC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 5 5 106 2L 4468742 4468761 GAAGACTGTCGAAGAACGTC 58 4468590 4468673 TACCCAGATGGCAAAGAGG 59 NA Drosophila melanogaster 61 Gr22a FBgn0045501 FBtr0077897 3 1 1 81 2L 1793818 1793904 CAGAGTAACAGAATTCACCCTC 58 1793758 1793782 CTCATAGTTTATATCGAGCAATCCC 59 NA Drosophila melanogaster 61 CG2813 FBgn0031268 FBtr0078069 1 1 1 80 2L 575076 575150 AACTACTTTGTCATTAGTGGCG 59 575189 575209 AAGTCCTAATAGTGCGGTGAG 59 NA Drosophila melanogaster 61 CG42399 FBgn0259818 FBtr0301929 1 1 1 80 2L 147396 147415 AATCCGGTATTTCCACAGAC 57 145897 147354 CTGTTTCGGTATCCACTGAC 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0100309,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 8 8 80 2L 118981 118999 AAAGCGTTTATGCATTGCC 58 118863 118938 TCGTCTAAACCAGTTGTAGG 57 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 1 1 2 108 2R 10659128 10659306 GATCCCAATCATCAAGAAAGAC 57 10659375 10659393 ATAATTGGCGACGTTCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 2 5 5 70 2L 14616430 14616515 ATCTGAAGAACCTGGTGATCC 59 14616547 14616565 ATTGATTGCCTTCAGCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073341 3 1 3 128 3L 4307459 4307477 AATCCTCGATTCCAGTGGA 58 4298762 4307367 GTGTGGCGTCTTTAGTCAG 58 NA InUTR Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 1 2 2 80 3R 3804722 3804740 TGCTACTCTCCGGATTCCT 59 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 1 4 4 92 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 bgm FBgn0027348 FBtr0080590 1 1 1 80 2L 14015965 14015985 ACAATTATGGCGACTATCCTG 58 14016024 14016142 GCTCATATTGTTTGTAGGTGAC 57 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 2 6 6 134 2L 5041823 5042495 CATCGGCAACACGAAAGAG 59 5041707 5041725 CAGGCTTTCAACTCATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14526 FBgn0027578 FBtr0301945 1 1 1 60 3R 24710900 24710920 AACATCCTGATAGAGAACACC 57 24710939 24710960 AAATGTAGAAGGGTTGTAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3308 FBgn0038877 FBtr0084102 2 1 1 81 3R 17099103 17099127 GAATCTGACCAACAAGAAGTATAGC 60 17098541 17099066 CATTAGTTTCTGGACACCTGC 59 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302566,FBtr0302564,FBtr0302565 3 3 3 61 3L 4195845 4195864 ATGGTATGAAGGCCATTTGC 59 4195888 4195906 CCATTGTCGCAGGATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 2 3 3 80 3R 11740153 11740173 GGATAAACTGACCAACGAGTG 59 11737878 11740114 GCAGATATTTCCTCTTTGTGCT 59 NA Drosophila melanogaster 61 Pros45 FBgn0020369 FBtr0077189 2 1 1 104 X 21187421 21187586 AATGCTAAAGTTCGGATGCTG 59 21187650 21187670 GACCAGCACTTTCTTCTTGTC 59 NA Drosophila melanogaster 61 CG15322 FBgn0031088 FBtr0301569 1 1 1 138 X 20031047 20031508 ACTTTATGCGTATCCGCTG 58 20031610 20031628 CAATGCTGTCGGAGATGTC 58 NA Drosophila melanogaster 61 CG15618 FBgn0031077 FBtr0289978 3 1 1 81 X 19755465 19755556 CGGAGTCAACCTTAAATCTCAG 58 19755405 19755425 ATTTCACGTGTCATCAGATCG 58 NA Drosophila melanogaster 61 CG34401 FBgn0085430 FBtr0112653 3 1 1 82 X 18771735 18771753 GAACAACCACCAGATGGTG 58 18771797 18771886 ATTGGATGTACATCTGCTGAC 58 NA Drosophila melanogaster 61 CG6290 FBgn0030921 FBtr0074563 3 1 1 64 X 18331608 18331626 ACAGAATCCGCTAGAGTCG 59 18331654 18331672 CTGCCTCCGCTATATTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8915 FBgn0030833 FBtr0074447 1 1 1 90 X 17138019 17138037 CTATCAGTGTCTCGGAGCG 59 17137886 17137967 CTGCATTGTCTATTCATGCGA 59 NA Drosophila melanogaster 61 CG5010 FBgn0260747 FBtr0074387 2 1 1 257 X 17043120 17043139 AAATTCTTGCGTGAAACCGA 59 17044009 17044027 TCTGCTGGAACATCGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299578 2 1 2 153 X 16917166 16917185 ATATTGGATGACCTCACCGG 59 16917301 16917654 GGTCGGTTTATTTCGCTCG 59 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 3 3 3 110 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494497 16494515 AGGATAAGGCATCGTTCCC 59 NA Drosophila melanogaster 61 caz FBgn0011571 FBtr0074217 3 1 1 80 X 16186612 16186630 GATGGTGACTGGAAATGCA 58 16186670 16186934 CTTGGGAGTCTTACATCTATTGC 59 NA Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 3 2 2 177 X 16110288 16110308 CAACTCGCTGCTAAATTAGCA 59 16107225 16107243 TAGATGGGAGTGCACATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 CG9240 FBgn0030669 FBtr0074060 1 1 1 144 X 15594833 15595032 ATTTCGTCCTGTGCAAAGG 58 15594707 15594725 AACTGATCGGCTTTGATGG 58 NA Drosophila melanogaster 61 CG33177 FBgn0053177 FBtr0073962 1 1 1 84 X 14975769 14975787 ATTTACGCCTGAGTCGGAG 59 14975976 14975994 TCTAGGTCGTTGCGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0112982 3 1 2 145 X 14195299 14195896 ACCAAACAATGCAGATGCG 59 14183415 14183433 TACTGAACTGAGGTCGAGC 58 NA Drosophila melanogaster 61 CG15756 FBgn0030493 FBtr0073783 2 1 1 80 X 13429299 13429317 AAGTGAATGAGGCTGAGGA 58 13429359 13429687 GGTTTACAGCATTAGGAACCA 58 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 1 4 4 119 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698381 11698399 TCTCCAATGAGACGCTCAC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 2 1 15 80 X 11290114 11290132 GATGGTCAATTCGCAGTCG 59 11294857 11296752 TAGATAATCTCGCCTCCTTCAG 59 NA Drosophila melanogaster 61 CG2962 FBgn0030186 FBtr0071486 2 1 1 215 X 10110148 10110593 GTCAGCATGAAGGTCTTCG 58 10109951 10109969 ATGGATCACCTTGACCACC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32706 FBgn0052706 FBtr0071287 1 1 1 80 X 8981505 8981526 CTGAAGGAAATCATGAACTTGC 58 8981564 8981658 CTTTGTCTTGAAACTTGACAGC 58 NA Nonspecific Drosophila melanogaster 61 CG10920 FBgn0029963 FBtr0071150 2 1 1 60 X 7747486 7747505 TCTGGTGGAATCTGACAAGG 59 7747445 7747466 GGATGTGTTATAACCACTACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3149 FBgn0027564 FBtr0070846 3 1 1 125 X 5587492 5587510 AGCACCTACTACATCAGGC 58 5587316 5587406 ACTTTGGTACCAATAACAGACG 58 NA Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221,FBtr0300222 3 2 2 68 X 5577409 5577427 AGAGATCGCTCTTTGGGTC 59 5577459 5577477 TATTCCAGCCGTGACTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4151 FBgn0029770 FBtr0070779 3 1 1 213 X 5395910 5395928 AGCAAGTTCACCATTTGCC 59 5396105 5396123 TGGGTTCGAGTCCATTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cib FBgn0026084 FBtr0070640,FBtr0070639 3 2 3 87 X 4000297 4003730 CTAAATCAAGATGGCCGCC 59 4003781 4003799 GTTGAATCCCTCCAACTGG 58 NA InUTR Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 3 2 2 177 X 1362209 1362292 CATCGTTAAGGCCATCACG 59 1362497 1362515 AATGGTCTGCAGGATAGGC 59 NA Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 3 1 1 81 X 925026 925103 AAGGCTATCATGCACATGG 58 925147 925166 TATTCACTCCGGGAATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Su(Ste):CR42442 FBgn0259873 FBtr0300170 2 1 1 82 U 9728472 9728490 ACATCTTCTTACGCAGCTG 58 9728408 9728429 ACAACCAGGACTATATTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42409 FBgn0259840 FBtr0300138 1 1 1 60 U 6164175 6164196 CTGCCCTAAATACTTGGTTCAG 59 6164136 6164158 CTCGAATGAGTGCTTGATATGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31032 FBgn0051032 FBtr0085524 1 1 1 80 3R 25685368 25685442 AACCGGCCTATAAGGTTTCC 59 25685307 25685327 CGTTCTACCCTACTCCTTGAC 59 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 3 2 4 127 3R 26742434 26749148 AAACTCAGAATTTGGGCCG 58 26749238 26749257 TTCGATATCGAGGATGTCGA 58 NA Drosophila melanogaster 61 CG15543 FBgn0039799 FBtr0085700 2 1 1 60 3R 26568964 26568983 GAAGGTCCTTGGCATATGTG 58 26569004 26569024 ACATCGGCATCCAATATTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34296 FBgn0085325 FBtr0112492 2 1 1 110 3R 25548324 25548398 GAATGGCGATTGGTGACTC 59 25548472 25548490 ATCCAGTGACCACTTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 1 4 4 84 3R 25325967 25326046 GCTATCAGGAAATGTATTCCGC 59 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0301306,FBtr0085308 3 3 3 81 3R 24520578 24520596 CTCCTTCTATCCCACCCTG 58 24520638 24520718 CAGTGATATGTATCTCAGCACC 58 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 2 6 6 66 3R 24426902 24428497 GTGGACAAAGTTGTGTTGCA 59 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 Noa36 FBgn0026400 FBtr0085320 2 1 1 89 3R 24424491 24424509 CTTCTGCAACGGATTCCTG 58 24424328 24424349 GATTGACACTTGTAGTTCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14259 FBgn0039483 FBtr0085104 3 1 1 87 3R 22920798 22920940 TCAAGGAGAGTCGTGTGAG 58 22920988 22921009 ATTTCATACCTTCCATCCAGTC 58 NA Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 3 2 2 80 3R 22095467 22095486 ATCAACCACATAAGGGAGGT 58 22095528 22095681 TTTGGGCACTAAGTTGACTC 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 3 5 5 83 3R 21871476 21871494 GTGAGAAGTATCGCACACG 58 21871538 21872267 CTTCATCCTCTTGCAGTTTCTC 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 2 5 5 61 3R 21451885 21452079 CCAACCTGCTCAAGAAGTG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084885 1 1 2 93 3R 21445619 21445637 GATTCTCGTCAACTCGGTG 58 21445694 21445776 GTTCTCCTGCGATGAACTC 58 NA Drosophila melanogaster 61 CG4582 FBgn0039344 FBtr0084896 3 1 1 80 3R 21407985 21408202 TCAATCCCACCAGAATCCT 58 21407923 21407941 AGTAAGCTGGCAATAGCTC 57 NA Drosophila melanogaster 61 CG5111 FBgn0039343 FBtr0084880 2 1 1 60 3R 21332803 21332824 GATGAACTCTTCTCCCAATGTG 59 21332842 21332863 TTAAGGCATAGTTATCCACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5107 FBgn0039342 FBtr0084879 1 1 1 80 3R 21330937 21330955 AAATGAAAGCCATCACCGT 58 21330999 21331077 ATTCTATTGCATTGGCCCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31126 FBgn0051126 FBtr0084663 1 1 1 113 3R 20485574 20485592 GGTCATTAACGAATCGCCC 59 20485668 20485743 AATCGATGACGCTTGATGAG 58 NA Drosophila melanogaster 61 CG10177 FBgn0039083 FBtr0084424 3 1 1 60 3R 19346904 19346924 TAACATCGCTGAGTTGTTTCC 59 19346864 19346883 TCTTCGTTCTTACAGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fzo FBgn0011596 FBtr0084399 3 1 1 60 3R 19029027 19029048 TTTCATTCTAGTTCTCAACGCC 59 19028988 19029007 CTTGAAGAACTGCCTTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31457 FBgn0051457 FBtr0084405 3 1 1 80 3R 18952757 18952834 GTTACTGGACGATGAACCA 57 18952695 18952714 ATGTTGATCTCAACCATGGG 58 NA Drosophila melanogaster 61 CG4723 FBgn0039023 FBtr0084318 1 1 1 60 3R 18588764 18588782 GCTCAGATATTCGGGACTC 57 18588722 18588740 TTTAGTTCGGATGCCACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4813 FBgn0039013 FBtr0084326 3 1 1 66 3R 18551423 18551441 ATGAAGAGTACGAGTGGGC 59 18551375 18551393 GAATAGCCTCCTTGCACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5745 FBgn0038855 FBtr0084008 1 1 1 80 3R 16929827 16929845 CTACATCTTTGCCCAGCTG 58 16929888 16930317 TGTAAGTTCACGTCAATGCG 59 NA Drosophila melanogaster 61 CG5451 FBgn0038666 FBtr0083721 2 1 1 81 3R 14806470 14806556 AATCGAATCAGCGGATGTG 58 14806407 14806425 CTGTAACGTTTGCAGGGTC 59 NA Drosophila melanogaster 61 CG7142 FBgn0038595 FBtr0083600 3 1 1 60 3R 14104371 14104391 AGGGATATGGAACTTTGTACG 57 14104331 14104349 GGATAATTGGGTACCGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555,FBtr0290321,FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 1 7 7 270 3R 14001240 14001333 GCGATCAATATGTTTGCTGTC 58 14001564 14001583 CAGTCTTCAGGAAATCACGT 58 NA DesignRelaxed Drosophila melanogaster 61 Det FBgn0259784 FBtr0083408 2 1 1 122 3R 12975633 12975728 CATTTCGAAGATGGCCGAG 59 12975814 12975832 TTCCACGGATCATCTTCGG 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333,FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036,FBtr0083334 1 6 6 80 3R 12458002 12458088 GATGAAGGCTTCAAGCTCTC 58 12458128 12458149 GACAGTGTTTGGTATCACATGG 59 NA Drosophila melanogaster 61 CG5404 FBgn0038354 FBtr0083165 1 1 1 80 3R 11531789 11531809 GCATTGAAGAGTCGAATATGG 57 11531847 11531923 GGTCCAATAACTCTAGTAAGAGC 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089967,FBtr0089962,FBtr0089958,FBtr0089964,FBtr0301960,FBtr0089965,FBtr0301959 3 7 13 173 3R 11126785 11128882 GTCTAAAGGAGGCTGAGGC 59 11133384 11133404 TTGTCGCTTATTCCTTGAGGA 59 NA InUTR Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089967,FBtr0089962,FBtr0089958,FBtr0089964,FBtr0301960,FBtr0089965,FBtr0301959 2 7 13 172 3R 11126787 11128884 CTAAAGGAGGCTGAGGCTC 59 11133385 11133405 GTTGTCGCTTATTCCTTGAGG 59 NA InUTR Drosophila melanogaster 61 CG7262 FBgn0038274 FBtr0083008 1 1 1 83 3R 10722230 10722249 CGGAGTCTTTGATACCACCA 59 10722104 10722187 AAGAGTCCACTGTTAACATCGT 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 1 5 5 135 3R 9476212 9476541 CAAGGGTGACTTTGAGCAG 58 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 2 2 2 80 3R 8813013 8813033 GTATGCTTACCGAGAATGGAG 58 8813073 8813169 AATTTAGGACTTGATCGGCAG 58 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0290335,FBtr0301943,FBtr0290334 2 3 4 84 3R 8344791 8344902 CTGGCGCATCTTTAAGGAG 58 8344725 8344743 CATGTGGACGCTGTTAAGG 58 NA Drosophila melanogaster 61 CG12267 FBgn0038057 FBtr0082635 1 1 1 80 3R 8286516 8286604 GGTATCCTCGTTACGTTCAC 58 8286644 8286665 CAGAATTAATCAACTCCTCCGA 58 NA Drosophila melanogaster 61 GstD6 FBgn0010042 FBtr0082573 1 1 1 60 3R 8203073 8203092 CGTTATTTGGGAAACTCGGG 59 8203113 8203133 ATCATCCTTACCGTACTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 2 2 2 88 3R 7650662 7663896 TCATTTGAGGCTTCAACAACC 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583,FBtr0082134 1 2 2 81 3R 5593800 5593818 TTCTGTTCACTTCGTCGTG 58 5594645 5594663 CATTGAATGGAGGAAGCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HP1e FBgn0037675 FBtr0082016 1 1 1 60 3R 5147664 5147684 GGGCCAATTACAATACTTGGT 58 5147703 5147724 TTCCCAGGTATTATCTTCATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8444 FBgn0037671 FBtr0081978 2 1 1 157 3R 5086478 5086719 TTATAGCGGCCATCAATGC 58 5086840 5086858 TCCGTTCCAGTTGGTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8032 FBgn0037606 FBtr0081880 2 1 1 83 3R 4490463 4491171 AATCAGAAGATAGAACTTGGCG 58 4491215 4491233 TAGACCATGTTGTACGGCC 59 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 3 3 3 106 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723663 TATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 CG31551 FBgn0051551 FBtr0078706 3 1 1 60 3R 1456843 1456862 TGAAGAATCAGAGCAGGGAG 59 1456883 1456903 AGTAGAGTGTGAACTTGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0078740 2 1 2 169 3R 1448403 1448481 TTTAGACTTAACATGCCCGA 57 1448253 1448271 TTGAAGTCACTGTTCTGGG 57 NA InUTR Drosophila melanogaster 61 Or83a FBgn0037322 FBtr0078797 3 1 1 98 3R 1224161 1224179 ATCAGGGCAGTACGATGTC 59 1224028 1224100 TGCAATTGATTCAGTTCCGT 58 NA Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829,FBtr0078828,FBtr0078830 2 3 3 60 3R 1048178 1048201 CAAGATTCTATCCCTTTCTCAAGC 59 1048141 1048159 TTGTCAACCTCGGTAGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 3 4 4 176 3R 206341 206431 ATACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 tRNA:E4:62Aa FBgn0011851 FBtr0072685 1 1 1 60 3L 1397703 1397724 TGTCTAGTGGTTAGGATATCCG 58 1397745 1397763 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32462 FBgn0052462 FBtr0078579 2 1 1 65 3L 22845607 22845625 CTACTCTACTGCGTGGTGG 59 22845560 22845579 GTTATAAAGCCGGAACTCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rgn FBgn0261258 FBtr0078346 3 1 1 195 3L 21404664 21412710 CGTCTTAACCAATAGCCCG 58 21412866 21412887 GATAAATACTTGACAGCACCAC 57 NA InUTR Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 2 2 2 80 3L 19539056 19539245 ATTGTACAGGTTCATCTGTGTC 58 19539284 19539304 TCGATGATTATTTGTCCCGTG 58 NA Drosophila melanogaster 61 CG42374 FBgn0259720 FBtr0299975 3 1 1 74 3L 19257695 19257713 AAACCTTGGTCTGAGTCCG 59 19257809 19257827 TCTGGATTCACTGTCGTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CheA75a FBgn0036783 FBtr0075129 1 1 1 188 3L 18245231 18245310 AAATAAAGTGCGAGCAGTCC 59 18245461 18245479 TTGAATAGAGCTCCACGGA 58 NA Drosophila melanogaster 61 CG32177 FBgn0052177 FBtr0075210 3 1 1 231 3L 17647256 17647274 GAAAGCGAAACGCCTACTG 59 17642298 17642316 GGTCCCAACTGATCATCCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 1 3 3 80 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665573 16665591 GCAATGGGAATGTCATCGT 58 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 2 2 2 80 3L 16571599 16571685 CTACTACAAGTACATTAACACGGAG 59 16571543 16571563 CAATTGTTTACCAGGTGTGCA 59 NA Drosophila melanogaster 61 CG13045 FBgn0036596 FBtr0075472 2 1 1 60 3L 16283389 16283408 TCACCACCTCATCATTCTCC 59 16283348 16283367 TGCTAAATGCTACAGGAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 1 2 2 80 3L 16118876 16118962 CAGTTACTGGATAAAGAAATCCTGG 59 16118999 16119018 ACGAGCAATGCGTATAAAGG 58 NA Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075755 2 1 2 60 3L 13875273 13875744 CTAACTCAAATAAGAAGCGACC 57 13875762 13875783 TGTTTGATCTCCGTCAAATAGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 3 4 4 100 3L 13884420 13884438 AGCTACCACTACAGCAACG 59 13884043 13884356 TCCCGATAAATCTGGTGGG 58 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 3 3 3 81 3L 12468728 12468750 GAGAGTGATGAAGAGCTATACAC 58 12468611 12468689 CTTGGGTAACCTTAACAATGC 57 NA Drosophila melanogaster 61 toe FBgn0036285 FBtr0075980 2 1 1 110 3L 12416722 12416809 GGATGATAGATATCGAAGGCGA 59 12416633 12416651 CCTTCTCCAGCTCATCCAG 59 NA Drosophila melanogaster 61 CG32105 FBgn0052105 FBtr0075953 2 1 1 80 3L 12328173 12328266 TTCTCACCGGATGACTATCC 58 12328309 12328327 GTCAAAGTTGCTCCCATCC 58 NA Drosophila melanogaster 61 CG17824 FBgn0036234 FBtr0076046 3 1 1 60 3L 11974391 11974412 CAAGGGTATCGAATATACCGAC 58 11974433 11974451 TTGGCGGGAATAGTCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7607 FBgn0036145 FBtr0076163 2 1 1 81 3L 11193357 11193377 ACGAATCTCACATAGAAGCGA 59 11193420 11193507 TCGTAGAAACCAGCATCCA 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114547 3 1 9 113 3L 8354557 8354581 GAGATGGGTAACTATTTATCTAGGG 58 8350989 8351118 TTGATCTTCTGGGCCATCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14837 FBgn0035797 FBtr0290223 1 1 1 134 3L 7551426 7551444 GATAAGTGCCGAAGTCTCG 58 7550664 7551328 ACTTTACGACTTTCCACGG 57 NA Drosophila melanogaster 61 CG13717 FBgn0035562 FBtr0073320 3 1 1 62 3L 4629881 4629902 GCGAATCCAATTAGTTACTTGG 57 4629840 4629858 GATGCTGGTGCGATTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1309 FBgn0035519 FBtr0073229 1 1 1 80 3L 4260252 4260378 AACTTATGAGACCCATGCTG 58 4260421 4260439 TGGTCTTAACCTTGTAGCG 57 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 3 3 3 170 3L 3328026 3328045 AGCTGACGGATCTAAAGGAG 59 3328178 3328263 CATTCACATCGACCTTGGC 59 NA Drosophila melanogaster 61 oxt FBgn0015360 FBtr0072904 1 1 1 163 3L 2261603 2261722 AATAGCCAAGTTCACCGCT 59 2261458 2261479 CCACATGGATGTAGTAAACGTG 59 NA Drosophila melanogaster 61 CG33229 FBgn0053229 FBtr0072499 3 1 1 68 3L 224592 224610 CGAGCTTAGTAGCCTCGAC 59 224642 224660 TTGCATGTGTCTTGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 3 2 2 194 2R 20487184 20487203 TATCCAGCTGAGTACAACCC 58 20486890 20486908 GAACACGTACTTGTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Brca2 FBgn0050169 FBtr0072302 3 1 1 90 2R 20414491 20414510 AGAACTTGAGGGATGACCTG 59 20414562 20414641 ATAGTTCCTGGACCTTCCTG 58 NA Drosophila melanogaster 61 Ir60c FBgn0259186 FBtr0302287 2 1 1 60 2R 20406415 20406436 AGTTCCCTCAAGCAATATAGGT 59 20406455 20406475 TGAACCAGAGCAGATAAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166,FBtr0072167 1 2 2 65 2R 19921910 19921928 GTGATGCGAAAGTGTTCGA 58 19922223 19922242 TGTTCAAACTCTCGGTTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fib FBgn0003062 FBtr0071982 1 1 1 127 2R 18961158 18961557 TCTCCGTTGAGACCAATGG 59 18961049 18961067 GTAGAGAACCTTCGAGCCC 59 NA Drosophila melanogaster 61 plu FBgn0003114 FBtr0086306 2 1 1 127 2R 16151082 16151158 AATAAATGCACTCAGCTGCG 59 16150974 16150992 TCAATAGGGCGGTATTCCC 59 NA Drosophila melanogaster 61 CG33724 FBgn0053724 FBtr0091722 2 1 1 74 2R 14527709 14527727 GGTGGATGATACAAAGCCT 57 14527831 14527849 AGCGGACTTCATAGTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG30325 FBgn0050325 FBtr0086821 2 1 1 60 2R 13765554 13765574 GCCAAACCGTTACTAATTTCC 57 13765514 13765534 TATTAGGGCCATAAGACAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614,FBtr0086798,FBtr0086797,FBtr0086795 1 4 5 257 2R 13745256 13745274 TAAAGGCATCCAGCAAGAC 57 13746955 13746973 TGTACCAATGGAGACGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6370 FBgn0034277 FBtr0089559 2 1 1 80 2R 13652665 13652685 GATTCCTCTTTGTCCAACTCC 58 13652546 13652625 AGGCTTGACTTCCTTATCCTC 59 NA Drosophila melanogaster 61 gprs FBgn0024232 FBtr0087109 2 1 1 80 2R 12532747 12532830 GATAACAATCCGAACATCGAC 57 12532872 12532890 GTTGGCCGGTATCTTATGG 58 NA Drosophila melanogaster 61 CG15706 FBgn0034093 FBtr0087191 1 1 1 88 2R 12112207 12112286 GATTATTTCACGAGCCTGCG 59 12112138 12112156 TCGGGCAGGAAATAGAAGC 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301313,FBtr0301314,FBtr0100388,FBtr0100387,FBtr0087315 3 6 7 155 2R 11651087 11651161 GCAAGATCAAGGGTGACTG 58 11650950 11650968 TGGTGAACAACTCGTTCCA 59 NA Drosophila melanogaster 61 Obp50c FBgn0050072 FBtr0087553 3 1 1 112 2R 10259962 10259980 ATTGTCAAGGACTGCTGTG 58 10260056 10260130 CATTCATAGAGGCAGGGTG 57 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 3 3 3 82 2R 9835606 9835691 TCCGTGCCAGATATCATCTG 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 CG33007 FBgn0053007 FBtr0087778 2 1 1 60 2R 9034172 9034190 AGCATCGATTATCACAGCA 57 9034130 9034149 GCTATCACTAGATCTTCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088041 3 1 2 82 2R 7861946 7861967 CGAATTCAACAGTATTGACGAG 57 7862010 7862110 ACTCGCAAGCATAATTGGG 58 NA Drosophila melanogaster 61 ths FBgn0033652 FBtr0088030 1 1 1 166 2R 7695557 7697412 TTAGTTGGCATGAGGGAGC 59 7697542 7697560 AACATGTAGCAGGCATCGT 59 NA Drosophila melanogaster 61 CG12912 FBgn0033497 FBtr0088365 2 1 1 176 2R 6121608 6121626 CTGACACTACCGAATGCTG 58 6121450 6121468 CTGTGGTCGTTGTCATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402,FBtr0113062 2 5 5 155 2R 5949891 5949909 CATCGGTGAAGAACAAGCG 59 5950028 5950221 TAGAATTCGAACCGGTGGT 58 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 3 1 1 61 2R 5341175 5341194 GATATGCCTACCTAAGGCCA 58 5341082 5341154 TTCAATTACCTTGAAGGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 1 3 3 115 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 CG13749 FBgn0033353 FBtr0300706 1 1 1 80 2R 4821197 4821216 AGCAGATCACGTCTATACGG 59 4821259 4821336 AGCGTATGTGTTCCTGGTC 59 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 1 1 1 76 2R 4793082 4793164 ACAATTGTGGCCTTCAGGA 59 4793024 4793042 AAGTTGTCGGTAGCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2064 FBgn0033205 FBtr0088923 1 1 1 80 2R 3554127 3554201 GTACTGAAGAACTCGGCTC 57 3554245 3554263 GTCGGCTACGTTAATGGAG 58 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 3 2 2 105 2R 3336437 3336509 GCTAAGAAACGCTACGAACAG 59 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA Drosophila melanogaster 61 Spn43Aa FBgn0024294 FBtr0089041 1 1 1 94 2R 3036192 3036392 TGCATAAGATGGGAATCAGTG 58 3036448 3036466 CACCTTTGTGATCCGAGTG 58 NA Drosophila melanogaster 61 Tsp42El FBgn0033134 FBtr0089032 3 1 1 107 2R 2935586 2935604 AATCTATATGTGCGCGGCT 59 2935675 2935757 AATGACAGCGTTGAATCCG 58 NA Drosophila melanogaster 61 sced FBgn0013732 FBtr0086110 2 1 1 60 2R 2545942 2545961 CCAAACTCAATCTGCTGGAC 59 2545984 2546002 CTCGACTCATGGTTCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 1 3 3 161 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-525d FBgn0083035 FBtr0113544 1 1 1 60 2L 20419214 20419233 TTTATAAGCGAACGGCATCC 58 20419256 20419274 CACGAACACAAGTCGTCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262 1 1 2 108 2L 22015389 22015463 GTCAAGATCCGAGCAATCG 58 22015533 22015553 ATGTAGTGTGACTTTGAGAGC 58 NA InUTR Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 2 3 3 80 2L 21680173 21680768 GCTAATGAACCGATTGTGGG 59 21680112 21680131 TTGTTGTCAGCCTCTTTCTG 58 NA Drosophila melanogaster 61 His1:CG33849 FBgn0053849 FBtr0091853 1 1 1 60 2L 21511943 21511962 AGTTGAGAAGAAAGTGGTCC 57 21511985 21512003 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2611 FBgn0032871 FBtr0081387 2 1 1 131 2L 20650448 20650542 TATCGGTGGCATTGTTTGC 59 20650637 20650655 ACATAGTAGCTTCCCGGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34051 FBgn0054051 FBtr0100106 1 1 1 83 2L 19960771 19960862 GCACAAACACTTTAACCGAG 58 19960707 19960727 CCTGATCTGTGTTTGAAAGTC 57 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081160 3 1 3 120 2L 19167700 19168105 GGAAGGAGCTGTTACTCCT 58 19168189 19168207 GATTCAATCGAGTTCGCCC 59 NA InUTR Drosophila melanogaster 61 Tango6 FBgn0032728 FBtr0081133 1 1 1 82 2L 18971346 18971364 CCTATCAGAGACGGCTCAC 59 18971410 18971488 AAAGAGGACCCAACTCCTG 59 NA Drosophila melanogaster 61 Aac11 FBgn0027885 FBtr0081001 2 1 1 92 2L 17476477 17476495 ATTCGCCGAGATGATAACC 57 17476348 17476421 AAAGGCATGTATTCCAGCA 57 NA Drosophila melanogaster 61 squ FBgn0002652 FBtr0080887 3 1 1 89 2L 16680264 16680455 AAAGACGCTGCTGATTCAC 58 16680508 16680526 ATTCACCATTGAGCACGGA 59 NA InUTR Drosophila melanogaster 61 CG31780 FBgn0051780 FBtr0080758 3 1 1 80 2L 15696256 15696509 CCCAAGAACCTAATAATCAAGGAG 59 15696548 15696566 CGAGTTGACAAATCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 1 2 2 80 2L 15046761 15046779 CTGTTCACAGGGTTTGCTC 59 15046640 15046717 CGATGCATTGAGTCCTGTG 59 NA Drosophila melanogaster 61 CG4691 FBgn0028870 FBtr0080670 2 1 1 60 2L 14761598 14761616 CGTCCCTTTAGACGTTGTG 59 14761640 14761658 GACACTCGGAGAAACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31848 FBgn0051848 FBtr0080479 2 1 1 60 2L 13265338 13265357 CTTATACCTGGTGAGTGCTG 57 13265297 13265316 GTCGAGGAGTGTTACATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 2 2 2 80 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053025 12053046 GTTGACCAGAACATAGATGCTC 59 NA Drosophila melanogaster 61 Vm32E FBgn0014076 FBtr0080216 2 1 1 76 2L 11171348 11171366 AATTTCACCAGCGCATTGG 59 11171290 11171308 CTGTTGACCCTGGATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 piwi FBgn0004872 FBtr0080166 3 1 1 84 2L 10983721 10983740 GAGAGCAATGGATGATTGTG 57 10983531 10983674 TGATGAGTATCTTTCGGCG 57 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 2 2 2 83 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492701 10492793 CTAATGGACGTCAACTCCC 57 NA Drosophila melanogaster 61 RluA-2 FBgn0032256 FBtr0080032 1 1 1 80 2L 10481499 10481519 TGTTAACTCTGAGAAAGTGCC 58 10481561 10481630 ACTTCGTGTCTATGCACCA 59 NA Drosophila melanogaster 61 da FBgn0000413 FBtr0080008 1 1 1 81 2L 10388514 10390059 CAGTGGATATTAGGATCTATTGCTG 59 10390098 10390116 AGCAGTTCTGGAACACCTC 59 NA InUTR Drosophila melanogaster 61 nmd FBgn0005322 FBtr0080065 2 1 1 84 2L 10303593 10303667 AGCAGCTTAAGAGGCTAGC 59 10303527 10303546 TGTGACGCAATCATAAGCTC 58 NA Drosophila melanogaster 61 CG31918 FBgn0031678 FBtr0079028 1 1 1 60 2L 5056455 5056473 GTTCCAAGTTCAGCCAGAG 58 5056413 5056433 AAGAACAATTCCCTCAGAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079011,FBtr0079010 2 2 2 62 2L 5055525 5055633 CATTGGAGCCCTACAGGAG 59 5055658 5055677 AGATTGGTGTCCTCGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34124 FBgn0083960 FBtr0110838 2 1 1 80 2L 4963959 4964035 GAGAAACAGAAAGAACTCGC 57 4964075 4964096 CATTATGTTAACCTTCTCGGTG 57 NA Drosophila melanogaster 61 CG2976 FBgn0031633 FBtr0077415 2 1 1 101 2L 4830113 4830131 CTGGAGCTTACTGAGAACG 57 4829970 4830051 GTCATAGAGATTAAAGCTGCGA 58 NA Drosophila melanogaster 61 CG3225 FBgn0031631 FBtr0077416 3 1 1 120 2L 4815846 4815923 TGATAGGTGTGAAACGATGC 58 4815745 4815763 TGATGTTTCAGGGACGAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15423 FBgn0031580 FBtr0077506 3 1 1 60 2L 4006349 4006369 CTTCATCGAGTTCAACATCGG 60 4006390 4006409 AACGATGATGACCTCTTCCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9662 FBgn0031529 FBtr0077594 1 1 1 82 2L 3376536 3376554 ATTCAGCATTCCAATGCCG 59 3376412 3376491 ATATGATACCGCCTGTCACC 59 NA Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 3 2 2 86 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025881 3025903 GTTTGAGTCGTTCTGAAGTAGAG 59 NA Drosophila melanogaster 61 CG2862 FBgn0031459 FBtr0077718,FBtr0077719 2 2 2 62 2L 2770393 2770472 ATGATAAATGCGTTGCCTTCC 59 2770496 2770514 GAATCACGAGGAAGTGGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 Ptth FBgn0013323 FBtr0301522 3 1 1 81 2L 576133 576153 CGATTTCTATGAGGATCTGGT 57 576014 576091 GAGCTCATTCGTAACTTTGC 57 NA Drosophila melanogaster 61 CG4213 FBgn0031251 FBtr0078093 2 1 1 81 2L 398852 399857 CAAACTAAAGGACCTTATTCTGGAG 59 398795 398814 ATCCAGATGGCTGTTAAGGG 59 NA Drosophila melanogaster 61 CG11454 FBgn0031224 FBtr0078116 1 1 1 60 2L 143380 143401 GGACTTGCAGTTACTAATGCAG 59 143422 143440 TTCCGAAATCGTCATGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 3 2 2 123 2L 156339 156431 CCTTGAATCGGGAGTGAGG 59 156515 156536 CCCAGAAGAAAGCAATAACTCC 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 2 4 5 96 2L 344410 344428 AAATCCAGTCCGCTAGAGG 58 344484 344571 GCGGAGAAAGACAATTAAGACTC 59 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 3 3 3 81 2L 738261 738333 CGTTAACTATCAGGACATGCC 59 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 3 1 2 189 2L 1038372 1038390 AAGAACGACAACGATGTGG 58 1038613 1038633 GTCATTCTTGTAGAACAAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 2 4 4 86 2L 1085133 1085215 CCCAACTCATCAATGGTGC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 1 1 1 76 2L 1165062 1165080 GACAAGGTCTCACTGAAGG 57 1165178 1165196 TTGGGATTTCCCTCGACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 2 3 6 124 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500036 1500124 GATATGTTGACTTGAGTGGCG 59 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301067 1 1 3 141 2L 2017843 2026777 CGTCCTCAGGAATCTCCTC 59 2026882 2026900 TGATCCTTTAGCCACTCGC 59 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 2 3 3 85 2L 2229506 2229527 GAGGCACTTAAACACATTAAGG 57 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 2 3 4 148 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740642 2740660 TTCTCCTTGGTGAACACCT 58 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 1 5 6 80 2L 3071761 3080666 GTTCATGTCCAAAGAGCTGG 59 3071700 3071718 TTCTCTAGCGTTCCCTTGG 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 2 2 3 90 2L 3292518 3292537 GTGAATCGCTCATCACTCAG 58 3292289 3292466 TCTATCAAGGCTGTCTCCTC 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 2 1 1 155 2L 3578929 3578947 CATCCACGAAAGAACGCAC 59 3578646 3578664 GACTGACAGAATCCCTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 1 5 11 178 2L 3626210 3626348 AAGCAGAGAAGGATGGACG 59 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 2 4 4 81 2L 3780571 3781917 GGATCACAGGTATATTCACTCCA 59 3781958 3781976 CAAGGTTCTCGATTGGCAG 58 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0290255 2 2 3 94 2L 3869054 3869131 AGTTTGGATGGCTTTGATTACC 59 3869184 3869204 AGACTCTCAATAGGATCGACC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079038 2 1 11 136 2L 4994986 5008191 ATACGGATTGGTGGAATCCC 59 4994869 4994887 TTAGGAGCGACAAGTAGGC 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301905 1 1 6 120 2L 5042883 5042994 ATATTGGCAAGAAGCAGGC 58 5042781 5042799 GAGTTCTCGAGTGGATGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 2 2 3 92 2L 5071021 5071111 TTTCCGGCGTAATACTGCT 59 5071235 5071254 CGATTCCAACCTTCTTGGTG 59 NA InUTR Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707 2 1 5 91 2L 5155841 5187619 GAGCAACAGGATCTAATTACGC 59 5187671 5187689 CTGCTCTGGTTCATGTTGG 58 NA Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 3 2 2 111 2L 5331345 5331365 CTCAAGCTGATCATATGCGAC 59 5331191 5331278 GCTTGTTATCTGGATACAGATACAC 59 NA Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 3 3 3 84 2L 5539760 5539781 TACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 3 2 2 89 2L 6024380 6024453 GGAGGGCTATGTAGTGGTG 59 6024309 6024327 ATCAGACGGATGAAGTGCT 58 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 2 2 2 87 2L 6097244 6097320 TCCCAAAGACGTACAATCCC 59 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300038,FBtr0079249 1 2 3 194 2L 6329690 6330134 GACTTCCGGTTCCATATCGT 59 6330291 6330309 CAGGGACTGTTCAAGTTGC 59 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 3 2 2 81 2L 6457103 6457350 AGTTCTTACAGGTCCCTATTATCG 59 6457390 6457408 AACAGTTGGAGCGTAGGTC 59 NA Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336 1 1 2 98 2L 6774877 6775838 TATCGAACAAGCTGACCCT 58 6775967 6775988 TGGTATAATCAATGCTCTCGTC 58 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 2 5 5 80 2L 6961942 6961960 AATGGAATCGATTCAGCCG 58 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 1 3 3 124 2L 7032325 7032343 CCAGCTAGTGATAGAGCCC 59 7032086 7032104 AGGAACTTGTAGTCCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 3 2 2 146 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312951 7312969 CTTGTGGAGATCTCGACTG 57 NA Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079444 2 1 2 81 2L 7427293 7427311 GACGGGAAATGTGGTTGTG 59 7427353 7428059 GTTAAGTTTCGACCTGATGCTC 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 3 3 6 85 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284053 8284131 GAACGGATAACCATCCGGT 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 3 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079678 3 1 3 138 2L 8487674 8487755 CATTTCTGTACCACGCCTC 58 8487855 8487875 CTGCTGAATGATCTTCTGGTC 58 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 2 3 3 81 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929039 8929058 GAGTTGCCTTAGGTTTCTCG 58 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 1 3 3 80 2L 9338507 9338591 CAAGATTGCTACCAGAGCC 58 9338634 9338653 GTGGTCACCAGACATATTCC 58 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0113030,FBtr0079861,FBtr0079860 2 3 3 82 2L 9549659 9550215 CCACAGGTTAAGGACTGGT 59 9549595 9549613 ACAAATAGAAGCGCCAACG 59 NA Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 2 1 1 159 2L 9937709 9937727 CAGTCAGTACTCCGAGCAG 59 9937421 9937439 GGCTTCCTCTTCGATTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 3 3 3 82 2L 9957834 9957852 CGAGATTCTCAGGGAGCAG 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0301840 1 1 4 80 2L 11142997 11143018 GACTATATCGTGGTTTCTGTGG 58 11142405 11142956 AGCAAATGTCGTACGTTCC 58 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0080286 2 1 2 85 2L 11991444 11991462 TTATGAGTGCGAGAGGAGC 59 11991509 11991584 TTTCATCGGTATCTGGGTCTG 59 NA Drosophila melanogaster 61 CG18789 FBgn0042127 FBtr0080315 1 1 1 63 2L 11995247 11995265 GCAACAACGAGCATTTCGA 59 11995147 11995165 CCATTGAGGCTGGATTCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 2 2 8 165 2L 12536412 12536430 GACCTTGACCGATGAACAG 58 12477157 12536283 TCCAGATGCACTTTCAGTC 57 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080441,FBtr0080439 2 3 4 80 2L 13204263 13208120 GCGATGGATGCTATGATATGG 58 13208159 13208180 CAATTACCTTATCGCCAAGAGC 59 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 3 2 2 80 2L 13298386 13298405 GCGTGATGAATAACTCACAG 57 13298445 13298568 AGAACAGAACCTTAGTCAATCC 57 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0100220 2 1 3 165 2L 13384638 13384657 TTTGCGCTCTTATTTACAGC 57 13384782 13384992 GCAAGTCTTCTGTAACTTAAGC 57 NA InUTR Drosophila melanogaster 61 rk FBgn0003255 FBtr0080610 1 1 2 96 2L 13990980 13991001 CAAATTGAAACGATTGAGCCTG 59 13990580 13990923 ATTCAGCTGTAGGCTGGTC 59 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 2 5 5 70 2L 14616430 14616515 ATCTGAAGAACCTGGTGATCC 59 14616547 14616565 ATTGATTGCCTTCAGCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 3 4 5 107 2L 17439290 17441811 AATGGACTCAGATCCAGCG 59 17439201 17439220 TGGTCATTCTGCAATTGCTG 59 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 1 3 3 80 2L 18127999 18128020 GCAATCAGGTGTTCATTATCTC 57 18128061 18128143 TATCCTTGTGCATCTGGTG 57 NA Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 2 2 2 83 2L 18141800 18141818 AGTATTGCGAAGTGCTCGA 59 18141242 18141753 TTCTGGAAACTGGCTTGCT 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0081051 2 1 5 87 2L 18391290 18391308 AATATTGTGGAGGGAAGCG 57 18391358 18392077 GCCAAACTATAGCCTTTGGT 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081210 3 1 6 81 2L 19410631 19426215 GACGATTTGGATGCTCTATTAGC 59 19410572 19410590 CAGTTCCATATTGCGGCTG 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 3 5 6 80 2L 19511014 19511033 CTACAACGACCTGGAGATCC 59 19510891 19510972 CCGATGTCCATACATCTCGA 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0112884 1 1 5 80 2L 20356787 20356880 CTAAATGCCGCTCATCTGAG 58 20356923 20356941 GCTGGAGTAATAGGCACAC 58 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 2 2 2 147 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813552 20813570 CCGAGTTCTCCTTTCAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0301238 3 1 2 95 2L 21157776 21157794 ATGTTCTCAATCTGGTGCC 57 21157636 21157719 TCTGACAGTTCATCGTATCCA 58 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 1 2 3 80 2L 21318354 21318372 GATGCTTACAAACAGGCGG 59 21318415 21318499 AGGAGTATAGCATTGCACCT 58 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 2 3 3 80 2L 21680173 21680768 GCTAATGAACCGATTGTGGG 59 21680112 21680131 TTGTTGTCAGCCTCTTTCTG 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111247,FBtr0111245 1 2 6 130 2L 22741818 22741957 AAATTGGTTGAGACGGCAG 58 22742101 22742174 TCAATGTATTCACCCGCCA 59 NA Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 3 2 2 107 2R 358353 358371 CAGTCTTGGCTGATGTCAG 58 346012 358282 CACTTCTAACACTCGGGTC 57 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 1 4 4 81 2R 705342 705360 TATATGCTGTCTGCGGGAC 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 2 3 4 96 2R 1414859 1414877 GACATCCTAATGGCTACGC 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 3 2 2 80 2R 2588319 2588401 CGAGTATACGGGCAGATGG 59 2588257 2588277 ATCAGATACGAACAGACACCA 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301420 3 1 7 121 2R 2616573 2617824 CGGCTTATAGATGAAATAGATGACG 59 2616476 2616495 GTTGGACAGCATTGGAATGG 59 NA Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 3 2 2 99 2R 2652231 2653048 GCCAATTACTTCCACTGCG 59 2652150 2652169 TTTGCATGAACTGGATCACG 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 2 3 3 162 2R 3106662 3107969 CATGATAACGAGGTTCGTTACTG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088957 2 1 3 91 2R 3415471 3416543 AGTTCAATGAGTGGAACAACAG 59 3415401 3415419 TTATGGTGATCGGGATCCG 59 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088935 3 1 3 85 2R 3616577 3616595 GCAATAGCATATCGGAGCG 59 3616452 3616528 AGTGCGGCATTCTTTAACC 58 NA Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 1 2 2 60 2R 3679892 3679910 TTGTGGATCTTACCGTCCG 59 3679850 3679869 ACCTTAGCCTTGATTTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112580 2 1 4 131 2R 3742126 3742145 GTTTGTGTCCTTCCTCAAGC 59 3741856 3742032 TTTGGTATGGAGCCCTTCG 59 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 2 2 2 80 2R 4014617 4014635 TTCATCGATGCAGCATGGA 59 4014500 4014576 CAGACTAATGTCCTTCAAGCTG 59 NA InUTR Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 2 2 3 101 2R 4505874 4505892 TGGTGCGAATTGTATTCGC 59 4505957 4506032 TATTGCGAACGTAACTGCG 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 2 2 4 83 2R 4758459 4758477 TCCTTTGGTAAACAGTGCG 58 4758521 4759738 GTTCAACGAGAAGCTAATTGTG 58 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301191 1 2 3 80 2R 4898914 4900535 ATGAGCTGGACTTGATACCG 59 4898853 4898871 CCAAGACACAGGAGATGGA 58 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 3 2 2 107 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957125 4961588 GATATCGTTGAGTCGCTGAG 58 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 3 2 5 92 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354442 5354461 GTATTCCAACGATGACGCTG 59 NA Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 1 1 1 65 2R 5708145 5708163 AAACGGTAAGGGCATATGC 58 5708250 5708268 ATGGTCAGGGCACTAAACC 59 NA DesignNoJunction Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993943 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444 2 1 4 191 2R 6038524 6038542 CTTCAAGCACAACACGTCC 59 6036936 6038372 TGTACTACCTCCAGATTCTCCA 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 3 10 17 83 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182825 6183262 TCGATTGTTCTAGATTCCCG 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 1 4 17 106 2R 6181259 6181376 TGAGATCGGAGGTCAAGGA 59 6181661 6181680 ACACTTGTAGCGAATCACGA 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089363 2 1 26 95 2R 6419606 6419624 CATATGCAACATGGCAGCA 59 6406866 6419549 GGTTTGTAGAGACATCTTGGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089363 3 1 26 96 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6406864 6419548 TTGGTTTGTAGAGACATCTTGG 58 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 1 4 4 105 2R 6730655 6730673 GTCATCGTCTTTCCCATGC 59 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 2 2 2 81 2R 7219882 7219954 AGATCAAGACATCCGTGCT 58 7219999 7220017 TCCATTGCAGCGTTATCTG 58 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0113074 3 1 6 123 2R 8337709 8337727 CCATTTCGCACATGGTCAG 59 8338098 8338434 TCGATGTGTCGGAATTCCA 59 NA Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944,FBtr0087945 2 2 2 80 2R 8396260 8396280 GGTTCTAAGGCATCTGTTCAG 58 8396134 8396220 TGTCAACTGTTGATTCACGTC 59 NA Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 3 2 2 95 2R 9241391 9241559 CAGTTCCACGATAACTGGC 58 9241314 9241332 TCACCAGTAAAGCAACAGC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 2 3 12 104 2R 9310220 9323716 AGTACGAAGATGACGAGGAC 59 9310135 9310153 TACCGTACTTAGTGGGCTG 58 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 1 2 2 115 2R 9741671 9741689 TAAGATCTTCGCTAGCCGC 59 9741378 9741396 CGGTCTTGATGTACTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0301593,FBtr0301592,FBtr0301591 1 3 15 196 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758835 9759180 CCCTTAAAGCTTTGACGCC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087621 2 1 15 121 2R 9771690 9771708 TCTAATCGATGCCACCGAG 59 9770040 9771605 CGAATACTGCTTGCCTCTG 58 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 1 3 3 80 2R 10252375 10252395 ATGCTCTGGGTGAACTAAGTC 59 10252437 10252515 CGTTCGGAACAAGTTGTCC 59 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 1 2 2 92 2R 10636930 10636949 CCATAATGTGGTAGGTCAGG 57 10637004 10637086 TGACCAGCATTGTTGTAGG 57 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 1 3 4 80 2R 10641389 10641506 ATGATCACGAGAAAGCAATGAG 59 10641330 10641350 GATTGTGTTGGATCTCGTTGG 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 3 2 6 81 2R 10834799 10835160 TGGATTGGGAATTGATAGCTC 57 10834738 10834757 CTTGTCACATAGGGATCTCC 57 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370 2 1 2 161 2R 11140508 11141561 CCCAATGGCATCATTGTGG 59 11141686 11141704 CTCACTATAGGGCGCATCC 59 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 3 2 2 82 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454667 11454756 CGAATCCTGATCGATTCAGC 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 2 4 5 85 2R 11826749 11827422 CTTATGAACAACCACATGAACC 58 11826685 11826704 GGCATAAAGCTGTTCATCAG 57 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 2 2 5 88 2R 12442681 12442699 TATTGAGAAACGCTGGCGA 59 12442745 12443120 CATTAGAGGTAGTTGTTTCTGAAGG 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087074,FBtr0087072 3 3 3 115 2R 12753591 12753667 ACGTTATGCAACGAAATGG 57 12753494 12753512 ACCTTGAGCGTGATTTACG 58 NA DesignRelaxed Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0087048 1 2 3 80 2R 12818774 12819977 CATCGATTCGGACTCACCA 59 12820021 12820039 CCACAATGATCGCAGAACG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 3 7 9 81 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958997 12959240 CTTGAGCTTGAGTGTTATCACTG 59 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086981 1 1 2 134 2R 12996660 12996680 AAAGAATGCCCGTTACTTGAG 59 12996776 12997684 CTCATCCTCGTGGCTATCG 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 2 3 4 85 2R 13309439 13311167 CCAATGGTCACATCGATGAC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 1 1 1 65 2R 13455638 13455656 ACTGGAAAGATCCTCACGC 59 13455204 13455222 AACTCGAGCCATTGTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 2 3 3 80 2R 13461765 13461849 AGAGAACGAGCTTATCTTCCTG 59 13461887 13461908 GTCTTTGAGCACTTGAGAAAGG 59 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900 1 1 2 89 2R 13474891 13475045 CGATGCAGGAATCTATCATGAC 59 13474823 13474841 GATTTAGCTGCTTGTCGCC 59 NA Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 2 2 2 60 2R 13666063 13666081 TACGACAACAGATTCCGCA 59 13665973 13666040 GCTTGCATTTCCTTCCAGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0300540 1 3 7 174 2R 13726719 13726830 TGGAGAAGAGCTTCTACGG 58 13727122 13727140 CTGGTCAACATGTTCTGGT 57 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0099994 1 1 2 80 2R 14073196 14073218 GCTACGATGTCTATAAGGTTGAG 58 14072972 14073156 GCTTGTTCCCGTTCTTCAC 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0301148,FBtr0086690,FBtr0086686 2 4 8 90 2R 14311970 14311988 AGAACCTCAAGGAGAGCAC 59 14312162 14312385 CGTTGGTATAGTGGTGCCT 59 NA Drosophila melanogaster 61 CG5189 FBgn0034350 FBtr0299805,FBtr0086694 1 2 2 79 2R 14334159 14334177 CTTTGACGCAGGTTCTCAG 58 14334278 14334296 CAATAGAGCTCCCTCCTGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 1 4 4 80 2R 14350182 14350257 GGACACAAGTCGAAGATCC 58 14350120 14350138 CGCTCGTGTATCATCACAG 58 NA Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 1 3 3 80 2R 14546264 14546282 TTAGCTTGGTGTCCAACAG 57 14546143 14546220 TCGGAATGAGTTTGCAGTC 58 NA Nonspecific Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 2 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587567 14587587 TGTTTGATAGTGTATCGCCGA 59 NA Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 2 2 2 102 2R 14682648 14682667 CTATGCGGGTACACTAATGG 58 14682503 14682583 CGGATTTGTCTCATCCCAG 58 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 2 3 3 80 2R 15314247 15314266 CTTCGAACGAGTCTCTTCAG 58 15314307 15314388 GATTCTCGGCAATTTCATGAG 57 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232,FBtr0301609 1 3 6 111 2R 15461820 15488394 TCACAGTTGATGTCTTGCAC 58 15461728 15461748 GCATCCAGATTATCGAACTCG 59 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319 3 1 3 80 2R 16143729 16143949 CGGCTAAAGATCGTGTTAGTC 59 16143669 16143687 GTATTTGCGATACAACGCG 58 NA Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 2 2 2 94 2R 16231426 16231450 CACACTGAAGATCAATAATGAGGAC 60 16231500 16231578 CCTTTCTAATACGATTGCGGG 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 2 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485963 16485984 TCTATATCCGCCGATATTTGGA 58 NA Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 3 2 2 80 2R 16764064 16764082 AATTTATGGCGATCACGCG 59 16764123 16764777 ATAAGCACCATAATTTCACCGG 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071653 2 1 2 93 2R 17410739 17442345 ATATGAAAGTCTGCATCGGC 58 17442401 17442419 CAGTTCGTGTACCGATCTC 57 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849 2 1 4 182 2R 18195756 18199213 TCCAACCGTCTAGATCTGG 58 18188394 18188412 AACCACAATGAGGAACAGG 57 NA InUTR Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923 2 1 2 153 2R 18587534 18587608 CACGCCTACATATGACCCA 59 18587399 18587418 TTATTAGTGGTGCTCGTGCT 59 NA Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923 3 1 2 154 2R 18587534 18587608 CACGCCTACATATGACCCA 59 18587398 18587417 GTTATTAGTGGTGCTCGTGC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 3 10 13 139 2R 18814847 18814866 CTGGCTACCGTTCTACTACG 59 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 1 8 13 140 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 3 1 1 154 2R 18841031 18841049 GGAAATCTTGACGGTAGCG 58 18839534 18839552 GTCTTTCAGGTAGCTCCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 3 2 2 64 2R 19777600 19777618 TCTACACGTTCAACTCGTC 57 19777554 19777572 TATGAAGAAGGCTCCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 2 2 4 109 2R 19833769 19833974 AAATACCAAACGCCAAGTGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 3 3 3 143 2R 19948088 19948209 GTTAAATTGGTGTACCTGCGT 59 19948377 19948395 CTTCAGACCCTTCCAGTCG 59 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 3 1 2 102 2R 19953830 19954096 GATCCCAGAATGCAATCTGG 58 19953664 19953684 CGTCATTGAACAAGTTACTGC 58 NA Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 1 2 2 80 2R 20151606 20151691 CGAGCTGTACTACAAATACTACTG 59 20151730 20151748 CAGATGAGCCTCTTCTTGC 58 NA Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391,FBtr0072392 1 2 2 118 2R 20826341 20826359 TAAAGATCGGCCAGCTGAG 59 20826554 20826572 GTCCTCATTGTAGTTGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 1 7 8 116 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878692 20878710 CATCCTGGACCGATGAGTC 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 1 5 9 89 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136024 136042 AACATTCTGCAATGCGGTG 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 1 2 6 81 3L 161362 167487 CATCAAATCGAAACTTTACGCC 59 167529 167547 ATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 3 3 3 94 3L 213968 214042 TATCTCTTGCGGATGGTGAG 59 214099 214117 GTTGTCCGACGATATCACG 58 NA Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 3 2 2 101 3L 219781 219803 GCTATAGTGATATTGCTCGTCTG 59 219635 219720 GTTAACGGCCACCTTTGTG 59 NA Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 2 2 2 80 3L 364835 364853 CACAAGGAGAGTAAACGCT 57 364896 364976 CTGAAGGTGTATCCGAAAGG 58 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 1 2 2 80 3L 570189 570272 TTCTGGAGCAGGTATTGACTG 59 570314 570332 TGATGTTCTCGGGCTTCAG 59 NA Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 3 2 2 106 3L 1476660 1476678 GTATACGCTTTGCTAGCCG 58 1476513 1476590 TCGAAGGAAACGAAGACCA 59 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072703 1 1 3 80 3L 1528070 1529118 AAGATCATCATAGGCGTCGA 58 1528009 1528027 CTTGTCCGGGAAGTAGTCC 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 2 4 4 111 3L 1551789 1551871 CTATGTGGACGAGATCGTCC 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 1 5 5 76 3L 1635310 1635330 AAGAGGAAATTCTGGCTTCAG 58 1635191 1635209 ATAATGCCCACGACAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798 3 1 2 84 3L 1723633 1723651 AGCACGGTAGATGCATCTC 59 1718084 1723588 AGGCATCTGCAAATTATATCGC 59 NA Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0072774 1 1 2 81 3L 1757190 1757312 AAACAACCACAGAGGTTGAG 58 1757356 1757374 TCTACTTTCTCGCGGTCAG 59 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 2 2 2 112 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965412 1965431 GATATTGACGCACCAACTCC 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 3 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 1 6 15 80 3L 3083800 3085212 CACTTATATGGTCACGCCG 58 3085253 3085274 TGATATGGTGCATAGAAGTTGG 58 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 1 5 5 64 3L 3300760 3300778 GTACCACCGATCTGGACAG 59 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 2 2 2 73 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466962 ATATAGTAGACGGCCAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 1 4 13 80 3L 3516816 3552793 AATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 3 6 13 178 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593476 3593494 AAGACCTCGGATTTGGGTC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 3 7 13 128 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593424 3593444 CGAATGGTACTTCATCTCCTC 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 1 7 13 127 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 3 1 1 200 3L 4115427 4115445 TGCATGGAGAACATCTCGG 59 4115083 4115102 GTTCCTCACATTCTTGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 2 4 6 239 3L 4418264 4418282 CAGGCGATGTAATTGAGGT 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 3 5 5 94 3L 4505302 4505411 AAGTTTGAACAGGTTCGCA 58 4505226 4505245 CGGGTAGAGCTCTTTATGAG 57 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 1 2 5 80 3L 4503454 4503539 AAATGCAGTAATCCCGTCG 58 4503392 4503411 ATGATAGTTGTACACCTGCG 57 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 3 10 10 114 3L 5543936 5543955 TTACTGGCGTTTCTTGTGTC 58 5538159 5538177 ACTTAGCAGAGTAGACGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 3 2 8 80 3L 5669476 5669495 ATCGCAATGAGTTGATCAGG 58 5669535 5669621 AGTTGGAGAAACTGGAATTGTG 59 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 3 2 3 131 3L 6093741 6093759 CCAGAATGGACCTCGTACC 59 6093853 6094044 GTAGATGTCGCTAAAGGCAC 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 6 6 91 3L 6584022 6584040 GTGAATCCTCCCAAACGTG 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 3 9 9 84 3L 7176527 7176546 AGGAATTGGTACGAGTGGTC 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 1 5 5 130 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 3 5 5 133 3L 7365497 7365515 GCGAGAATCAGCTAAGGGA 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 1 13 15 83 3L 7703369 7703457 CTTCTCGATAATGACCATAATCCG 59 7703309 7703329 TTGGTTACCATAATGGGAAGC 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 2 2 15 86 3L 7655387 7656366 TGAAATTGATCCGGTTGCAG 59 7655320 7655339 TCACTCTCGTCTTCAGTCTG 58 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0110885 3 1 2 98 3L 7729959 7731442 ACATGAATTCTGTGCTGCA 58 7729879 7729897 TTGGATCGTTGAAGACAGC 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499,FBtr0076776 2 2 7 86 3L 7811310 7846290 CATTAATGGCAAATCCACATCG 58 7811245 7811263 TCAACATTCCAGATGTCGC 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076673 2 1 9 250 3L 8351811 8353442 ACCTGATTCTCCAGTCGTC 58 8350929 8350947 ATGGAGTCCCAAATGATGC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 1 7 7 80 3L 8900034 8900179 CGTTTACGTGATAGGATGGTG 59 8899974 8899992 GCATCTCCTGCAAATGAGC 59 NA InUTR Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137 2 2 5 81 3L 8929865 8930047 GATGAACTTTAGGAAAGTATCCGG 59 8929807 8929830 CGACAATGTGGATATGATACTTGG 59 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 1 3 4 110 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 1 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964100 8964119 GACAAGTTCCTGAATTTGCG 58 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 3 3 3 80 3L 8963988 8964061 GTGGAGTGATCTCTATTTGCG 59 8964101 8964121 GTGACAAGTTCCTGAATTTGC 58 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 1 5 5 81 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986078 8986097 GCGGTTGTTAATCCTATCGT 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773 2 1 6 111 3L 9338072 9338090 CCGTCACAGTTACAGTGGT 59 9338163 9339674 AGCTGTGTTAGAAACCTTTGG 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 2 4 4 125 3L 9893174 9893262 TACCACAAAGAGTGGACAGAC 59 9893343 9893367 GGCTGTGAGATCTTTGATTATACTC 59 NA Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 2 2 2 74 3L 10639969 10639987 CGTGCTGAAGTTCGATGAG 59 10634845 10634863 ACGATGCGTCTGTAGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 3 2 2 118 3L 10652465 10652485 GACGAGATACAGATCTATCGG 57 10640129 10640147 TTCAGCTTGTTCACCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 3 4 5 126 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109441 11109459 GGGAGTCTGGAACAGATCC 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 3 4 4 80 3L 11520327 11520346 TGATCTCAAAGCCCTAGTGG 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 3 3 3 93 3L 11681178 11681257 TGCTACCATGCAGAGTCTG 59 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 2 2 3 173 3L 11730333 11730352 GAAACATCTGCACTACCACG 59 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999 1 1 2 80 3L 12144441 12144462 CACCATTAGCTATGGCATAACC 59 12144502 12145290 TTGCCCTTGAACATCTTGAC 58 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076009 3 1 2 165 3L 12268284 12270004 AGCATATCCTTCGACACCA 58 12266682 12266700 AGACCACCTTGTCGATGTC 59 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 1 3 3 80 3L 12736860 12736878 CTTTCACTGGTGCGAAAGG 59 12736922 12737001 GCCAGTGATGCCATATGAC 58 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851 1 1 2 80 3L 13436078 13436410 AAACTCTGAATGATCTCCTCCA 59 13436451 13436469 TGCTAGACAGATGCTGCTC 59 NA Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 1 2 2 89 3L 13501638 13502161 TCCCATTGCTCAAATAGTCG 58 13502213 13502231 GCGATACCTATACCACCAC 57 NA Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 2 2 2 81 3L 13507890 13507969 GGACAATTGCCGAAAGTGG 59 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 2 2 2 92 3L 13953170 13953735 AATTAGAGACCACCTTACAAGC 58 13954023 13954041 GAGTGCTCGAGTTTGTGTC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075633,FBtr0075632 2 2 2 60 3L 15090443 15090461 GGATGAGATTGCCATACCC 57 15090485 15090503 ATGCGGTTCCTTTAGAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100035 3 1 5 101 3L 15856323 15857709 CTGGAGAGGTAATTACAGTTGC 58 15856243 15856263 GTGACCAATATAATGCCAGGT 58 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575 1 1 7 119 3L 16056828 16056994 GAAAGCGAAGCTGAGAACG 59 16057076 16057095 ATTAGTGGGACTATCGCTGG 59 NA Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 1 2 2 103 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274836 16274854 TGGAAAGGAAGGAGACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 3 3 4 81 3L 16376955 16377037 GCTTTACTCCCAACTTATCTTCG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 2 2 2 80 3L 16382649 16382670 CCATCTGCTAGATAGCAATCCA 59 16382711 16382787 TCCTGGTTACTGTCTTGCG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 1 10 12 133 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914387 16914405 ACAATAGGGCTTCTCGTCG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 2 10 12 134 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 1 4 12 131 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 2 3 10 193 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923956 16923975 GGTTGATAGGCTCCATAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 1 3 3 80 3L 17035254 17035274 CAAAGTTCGAGTTCCTCTACG 58 17035132 17035213 GCTTTAGCAGAGCTTGTTCC 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0091474 2 1 3 80 3L 17030731 17030822 AACAAGCGAGTTTATCGATCC 58 17030671 17030690 GCGAGACAACGATCTATCTC 58 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 3 4 4 82 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391564 17391586 CAGAATGGAGTTAGAAAGGTCAG 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 2 4 4 102 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667495 18667514 GATATGGAGTTCGCCTTCCT 59 NA Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 3 2 2 80 3L 19539055 19539243 CATTGTACAGGTTCATCTGTG 57 19539284 19539303 CGATGATTATTTGTCCCGTG 57 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 2 2 2 80 3L 19650463 19656389 TTCCATCGAGAGTAATCCCT 57 19650402 19650422 CGACTAGTGACATATTGTGCA 58 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0100394 1 1 3 112 3L 19903143 19903164 GAGAATGACGATAATTTCCAGG 57 19881565 19881642 TCTTCGTCGTTCTGATTCG 57 NA Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 2 2 2 80 3L 20237607 20237625 TGAGTTTGTCTGGAACTCG 57 20237666 20238047 ATATGCCCACCTGTATAATGAG 57 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114618 3 1 4 96 3L 20959295 20959315 GCAACCATAGAAAGGGTACAG 58 20959154 20959242 CATTAGGAATCTTATCCAGCTCAC 59 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 1 3 3 80 3L 22284253 22284339 CTTACCAATTGGTATGTTCGAC 57 22284378 22284398 GTCAAGTGATTGAATGCACTG 58 NA Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509 1 1 2 121 3L 22297622 22300657 CAATAATGGAGGAGCCCGA 59 22297519 22297537 TGTTCCAGTAGCTGTACGG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687 3 1 2 198 3R 67700 67721 CCCACTGTACATCCATATACGA 59 67409 67485 TATTCCGTCAGTTCCACTTCC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0300790 3 1 21 173 3R 114889 120852 ACAAAGAAGCGCTGTAGGA 59 120989 121007 TTATCGCGAATGTCTTGCC 58 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952 2 1 4 138 3R 163060 165102 GATACCACGACCAGAAAGC 58 162940 162958 CCATCTCTTCTAGGGCCTC 58 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 2 4 4 176 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206589 TATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0112871 3 1 5 81 3R 454063 455899 AATGGACAGTAGCCATCCA 58 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 1 3 3 95 3R 525963 525981 AACGACCTGAGTGATTTGG 57 526040 526888 ATGGTCGCTCATAACACTG 57 NA Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 2 2 2 97 3R 1046104 1046123 TAGAGACCAACGAAGAGCTG 59 1046181 1046266 GGTTACGTTCTTAAGGTGGTG 59 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 1 2 2 104 3R 1063869 1063943 TTTCGATCGGCATCAATGC 59 1063783 1063801 CTAGAACACCGTGGTCGAG 59 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0078785 3 1 2 159 3R 1181843 1182158 ACGAAGATGATGAACCAACG 58 1182279 1182298 TTTAGCATGGTATGCCTGTC 58 NA Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 2 2 2 112 3R 1294733 1294752 CTGCTAGTTCGGTCTACTGG 59 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 2 3 3 122 3R 1314883 1314902 GAAACCAAGGACTTGGTGTC 59 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765 2 1 2 81 3R 1324583 1324673 GTTCCACCAGGAGAGTCTG 59 1324520 1324538 AAGTTCGCCGATAGAAGGA 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 1 3 12 80 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586624 1586642 AAGACGCTTCTGGTACTCG 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 2 1 2 60 3R 2569747 2569767 TGTGGACAATTACTCAGTCAG 57 2569640 2569659 TTCTACGTTTAACTCGACGC 58 NA DesignNoJunction Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 2 2 5 99 3R 2584144 2584202 CCAAGCCAGATGTCTTTCC 58 2584063 2584082 TCTGCTATTTGAGAGCTGGT 58 NA Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 2 2 2 103 3R 3979055 3979073 CAACTGCAAGACCACAACC 59 3975446 3978990 GACGATTGACATTGTGAAGCT 59 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 3 2 4 96 3R 4766832 4766853 GAATCTGTATGACCTGTTCGTC 59 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996 2 1 2 161 3R 4869351 4876094 ATTCACAAGCAACATGGCTC 59 4869209 4869227 ACATACTTCTCGCTAGCCG 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 1 2 2 80 3R 5080964 5080982 ATCTGCCAAAGCTCTACGA 58 5081024 5081096 GCTTGAATCTTAGCTCTTCGT 58 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082055 1 1 2 181 3R 5158554 5158572 AGTCCGTCCATGAAGACTG 59 5158334 5158409 ATCCAGAATTCCAGCTGCT 59 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 2 3 3 90 3R 5399132 5399151 CTGTACAACGGGATGATTGG 58 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 1 4 4 85 3R 6525744 6525762 CTACGGAGATCGGTATCGA 57 6525808 6525952 CAGATCGTTTATCTTATCGAGC 57 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 3 2 3 101 3R 7202931 7203770 GCTCCTACTTCTTCTACATTGAC 58 7203830 7203849 GAAGTACATCTTGAGCACCG 58 NA Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 3 2 2 185 3R 7326958 7329142 CAATACTTCGGCCATCTGG 58 7329291 7329309 TTGTCGTATCCAGGACACC 59 NA Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 3 1 1 105 3R 7500070 7500091 GTGAAGATTGGCATTAAGAAGC 58 7500220 7500238 ACTCTGTTCCATCCTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 1 2 3 91 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115989 8116008 CTATGGGACAGTTTCTGCTG 58 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 1 3 3 174 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 3 2 2 69 3R 8529489 8529507 ATCTTCAATGGGCTGGGAC 59 8529601 8529621 ATTTGATGAGTTCCTGCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 3 2 2 80 3R 8813015 8813033 ATGCTTACCGAGAATGGAG 57 8813075 8813171 CAAATTTAGGACTTGATCGGC 57 NA Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 2 1 1 84 3R 9089695 9089714 AACCTCCAGTTAACTCAGGA 58 9089570 9089588 GAGGATATTTCAGCAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657 3 1 2 189 3R 9090848 9090866 GGATCCTACACGAGGACTC 58 9091019 9091477 TTGATTTCGTTGTCGGCTC 58 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082773 1 2 3 92 3R 9158532 9159621 TTAGCACATGCTTCCACTC 57 9158458 9158476 GTGTTTACCTGGCATCCTG 58 NA InUTR Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 2 5 5 136 3R 9476211 9476540 ACAAGGGTGACTTTGAGCA 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 3 5 5 81 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796280 9796298 CTCACCCATTTCTTCCCGA 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 3 2 3 146 3R 10116532 10124520 TGCATTCGCAGTTTCAAGAG 59 10124629 10124647 TGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052 3 1 2 192 3R 11051629 11051698 CGATAATGCAGCGGAATCC 59 11051853 11051872 ACGATGTACCGAGTAGTCCT 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 1 5 5 111 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377352 12377370 GAAGCGGATACATTGACGC 59 NA Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 1 2 2 85 3R 12819315 12819333 ACTTTAATCCTGGACCGCA 59 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 cher FBgn0014141 FBtr0089471 1 1 5 154 3R 12932800 12932818 CTCCGTGGAAGTAATTCCG 58 12931524 12932682 TCATGATCACACTTGGCTC 57 NA Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 2 2 2 140 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264945 13265026 GTCCAACACAATTATGTCGC 57 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 2 4 7 60 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834615 13834634 TTCCAAGCGAATTGTTTGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 3 5 5 114 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132725 14133184 GGATACAGGATGGGACTGG 59 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 1 5 5 80 3R 14131624 14132351 GCAGCTCACTGAATATCCC 58 14131562 14131580 GAATACGGAGCACCATCAG 58 NA Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 1 2 2 83 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216845 14216863 GAGAATCCTGTGGGCAGAG 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 2 5 6 80 3R 14229547 14229625 GATGAGTTCCTCATTGCCG 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 1 4 4 86 3R 14810830 14834236 CACAGTTCCTGAAAGCGAC 59 14834286 14834304 GTAAAGAGCTCCTGCTGGA 59 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 2 4 4 96 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981434 14981452 GTCAAGCACCTTGTTCACG 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110919,FBtr0083765 1 6 8 86 3R 15332383 15332401 CTGATTGCCGTCTATCCCA 59 15332448 15332581 GCTGTTTAGGTTAGCATATCGT 58 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 1 2 3 82 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873435 15873529 CAAATCCACCCAACAGAAAGG 59 NA Nonspecific Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 2 2 2 80 3R 16114817 16114835 TATACGGATGTGTTGCACC 57 16114879 16114965 GGCATCCAGCGTAATATCC 58 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 1 2 2 60 3R 16564040 16564324 GGCTCCAGAAACTATCCCA 58 16563998 16564016 TTCTGTATCCACCACGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 3 1 1 96 3R 16876613 16876631 CCAAGTTTGGGACAGTTGC 59 16876474 16876492 GATACAAGCGCAGAATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258,FBtr0084014 3 2 3 185 3R 16956100 16956119 TTTAGACACAAGTTCCTCCC 57 16956346 16956364 ACTTAAAGAGATCGCCCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084068 1 1 22 105 3R 17182684 17200793 CAGAGGCTCAAGTATGCGA 59 17182597 17182615 TTAAAGGCCAGCAGTTTGC 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 3 4 4 86 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404213 17404292 GGCTGTCGAACTGATAATAGC 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 2 4 6 90 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615473 17616439 GCACGAATATAAGCACCGG 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 2 5 5 88 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 1 2 5 118 3R 17897750 17900175 TGCTGATCATAGCGTAGGC 59 17900256 17900275 GTATCTCAATGAAACCCGCC 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 3 2 3 80 3R 17957959 17958390 ACCAATCTATTTGAGGAGATGC 58 17958430 17958449 CAATTCGGTTATCTCACGCA 58 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084425 3 1 3 92 3R 19344240 19344258 CAATTGTGCCGAATAGGCC 59 19341196 19344185 GGAAATTGCGAGATCTGCAG 59 NA Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 1 2 2 109 3R 19584917 19584935 TAAGTTCCTCCTACCAGCC 58 19585007 19585088 TCCGTTCTTCATCATGAGGT 58 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 2 2 2 80 3R 19723175 19723194 ACAACTACCTGTAGTCCACG 59 19723054 19723136 GGATACACATTGTACCATATCGC 59 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 1 2 2 89 3R 19769944 19769962 TCTGCGTCATCTTCTTCCA 58 19769815 19769893 GGACATTGAGTAAGAATGGCT 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0084509 1 1 4 82 3R 19817812 19817831 AGGAGGATGCCAACTATCTG 59 19817578 19817773 CTCATAGGTATCGCTAATGATTGAG 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 5 6 81 3R 20045867 20045948 TAGAGATTACTGGCTGCGT 58 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100638,FBtr0084685,FBtr0100627,FBtr0100636,FBtr0100637 1 5 18 80 3R 20517648 20519504 TCAAGACGTCACCAGACAC 59 20519545 20519566 ATAGGGTTTCGGTGTACATCTC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 1 3 18 98 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527818 GGTGTTCATCTAAGTCATCGA 57 NA Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 3 2 2 81 3R 20707547 20707638 GAAATAAGCAGGTGCAGCA 58 20707484 20707502 AAGTCGACTAGCACTTGGG 59 NA Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 1 2 2 82 3R 21505847 21505865 TTCCTTAGTTCGGTCACCC 59 21505720 21505801 AAGCATGCCAACACTTCTG 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641,FBtr0084952 3 2 3 186 3R 21817553 21818125 GTTCCCACTCTTCAGAACG 58 21818593 21818611 CTTGAATGGACAGGTCAGG 57 NA Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 3 2 2 88 3R 23532962 23532982 TTCTTGTGCCCTTACTTTGAC 58 23533032 23533108 TCCAATTCGTCTTTGCGAG 58 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 3 1 1 81 3R 24108436 24108455 GATGGCACTGGTCTTATTGC 59 24108557 24108577 ACAGCTTGCTGATGTTATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0300337 2 1 4 83 3R 24347409 24348211 GGTTACAGTTAATGTTCATGCC 58 24347347 24347365 GAGCAGCTCATGACAATGG 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839 2 1 4 80 3R 24351015 24351600 GCTTAAAGCTAAGGACATCTGTG 59 24350957 24350975 GTGTCGTAGTACCAGCTGG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 2 6 6 66 3R 24426902 24428497 GTGGACAAAGTTGTGTTGCA 59 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 2 2 4 86 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698012 24698248 GTCAACTTCAACCTGCAGG 59 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475 1 1 2 132 3R 25566134 25566304 AACTTACGGAGGAGACATATCTG 59 25566396 25566414 AGAGGACGCACTTTCATCC 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 3 5 5 82 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871274 25871292 TGGGCATCAGATACTGTCC 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 1 3 4 80 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006478 27006498 AGATCACCAGGAAGATAATGC 57 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085815 2 1 2 145 3R 27438275 27438293 AAGGACGAATACTCAGCGG 59 27438400 27438618 GCATCGCCAACATATTCAGAG 59 NA Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 2 2 2 88 3R 27617576 27617594 GGATCCATTTGTTGCCACC 59 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 2 3 22 82 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707521 27707542 CCAGGTCCTGATTGTTATTGTC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 1 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261449 263095 CATCATTCCCTTGAGATCCA 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 1 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261449 263095 CATCATTCCCTTGAGATCCA 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 1 6 6 80 4 302513 302589 TCTTCCTTTATGTCAGGTTGAC 58 302454 302472 CCGCATTTATCCTTTGCAG 57 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129 3 1 2 195 4 399153 399355 CACATACATCGAAGCAGCA 58 398783 398802 CCATTGCCCGTAACTATCTG 58 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 1 4 4 82 4 596941 597612 TAACGGAAACGATGACCAC 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 1 4 6 106 4 640796 640895 CTCAACAGATATCCAGGTTAACAG 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089247 3 1 3 80 4 906512 907603 GGACAGGGACAAGAATGGA 59 906450 906471 CTATAGAATGGATTGTCACCGG 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 1 6 6 100 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974433 974453 CTGAAGTAGGAGTAAATGCCA 57 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 3 1 2 295 4 1052221 1052239 CTGATGTGGCTGAGTAGAG 57 1051127 1051148 CCATAGATCTCAAATAGCCCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 3 4 7 180 4 1080190 1080208 AACACAACCTCTCAACAGC 58 1079961 1080047 ATGAGAAGAGTCCATTGCAG 57 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 1 4 8 80 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129789 1129807 TGTTCTTGCCCGACTAAGG 59 NA Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 2 1 1 192 U 7798978 7798996 ATGACTAGAGCCAAGCGAG 59 7799213 7799231 AAACGGTACCAAGTGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 1 3 3 97 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242174 242192 TACTGATGTGGCATCTGGT 58 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 3 4 4 97 X 423509 423527 AATCTCTTGGAGTTCGCCA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 1 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643805 CATAATTATCGCTTGTCCGGA 58 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 2 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643806 CATAATTATCGCTTGTCCGGAC 59 NA Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 1 2 2 111 X 1814942 1814960 CTAGTGGCCATAAACGCAG 58 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 78 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962427 1962445 ACTTGGACTGGTAGGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 3 3 3 105 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038390 2038411 CAATGAACTGGTTGATCTTCTC 57 NA Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 1 2 2 80 X 2045870 2045962 GCTAAGCATACTGGTTCTTACAC 59 2045812 2045830 GCAGCTTGCATTAGAGCAG 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0299589,FBtr0290088 2 3 5 199 X 5097392 5097413 GCGCAGAATATCAAACATATGC 58 5111588 5115289 ATCTCGATGAGCAGGTCTG 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467 1 1 7 175 X 5272491 5272509 CATGTTCGGGATCATCGTG 58 5272753 5277105 TCATGAATAATCTCACCTGCAC 58 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465 2 1 3 81 X 5527492 5527782 GCCAAGTTTCTGGAAGCAC 59 5527429 5527447 CACTATGGGTTGTCTTGCG 58 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 2 3 3 91 X 5654841 5655209 ACGATCAGATGCAAATCAAGG 59 5654770 5654792 CATGTATAACTCCATCTCCTCGA 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 3 4 6 124 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470919 6470937 GTGTAACTGGTGCTGAGGA 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 3 5 6 107 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 3 4 21 82 X 6986733 6986757 CGTCCTACTATAACTTTAAGATGGC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 1 4 5 80 X 8404726 8406392 TCAATGGAAACGATCCCGA 59 8406434 8406454 TCGTGATGATTGAGCTTAGTG 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 1 4 5 80 X 8404726 8406392 TCAATGGAAACGATCCCGA 59 8406434 8406454 TCGTGATGATTGAGCTTAGTG 58 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 1 4 6 83 X 8478541 8478559 GGAGATCCAGTCGATCGAG 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 1 2 2 80 X 8977449 8977467 CCTCATTTACGAGGACGAC 57 8977507 8977587 CATGTGTAAGTTCCTAGGTTCTC 58 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 1 2 3 82 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859792 9859878 ATGTCTAGGAATCGAGATGCC 59 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 3 3 3 88 X 9955306 9955324 GCAATGTGAGCATACCGTG 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584 2 1 4 80 X 10120618 10120637 GGATCTGAATGTTTCGCTGG 59 10120679 10121391 ACTAAGGTGTCTGTTTCCCG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 2 2 4 80 X 10120391 10120554 GGTGACCACCTATGATAATGC 58 10120596 10120614 TTCCACGACGAGATCAGAC 59 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 2 4 4 80 X 10655534 10655625 ACCGTATCCCGATGATATTATCTG 59 10655477 10655497 ACCTTGGACATAATGGACCAG 59 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 3 4 4 118 X 10676327 10676424 AAGTACAAGCAGGTCTTCC 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 2 2 2 171 X 11005432 11005514 CAACGAGGATCAGAAACTCG 58 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 2 3 4 97 X 11049247 11055098 AAAGGAGAACCTATGGTCGG 59 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 2 2 2 80 X 11450136 11450227 TCTTCGAGCTGATCATTGGT 59 11450075 11450095 GGCCATAGAAGTATCTGTGGT 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 3 2 10 88 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848306 11856053 TGAGTTCGAATCATCGTGC 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 3 2 6 176 X 12534705 12534725 GGTACCGAATATGGACTTGTC 58 12534863 12542578 GCCGTTGATCTGATCTGAG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 2 3 10 80 X 13488930 13489045 TTCGAGGGTGGCTATAATACG 59 13488870 13488888 GCGCTGAGTGAATCTTTCC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301450,FBtr0301449,FBtr0112980 1 4 5 94 X 13549987 13550005 ATACGTTCACCTACACGGC 59 13550063 13554786 GAAACCGCTCACATCTTGG 59 NA Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 2 1 1 84 X 13613448 13613466 CAACAACGTAAGCTCCCTG 58 13613317 13613335 GTAGCTATCACTGGAGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290302 2 1 4 84 X 13700624 13700642 TCGATGAGGTGCTCATCTC 59 13700687 13703324 GTTGTTACAACCTTCTTGAGGG 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 1 3 3 80 X 14143260 14143278 GAAACGTGAAGCTAACCGA 58 14143319 14143417 ATCCCTTCATATGCTCAAACTC 58 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991 3 1 4 113 X 14724370 14724473 CTCTGTTCGCCATACTACG 57 14724275 14724293 GTTGTACGTTAACTTCGCC 57 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 2 2 8 121 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820886 14820907 CCAATATGGCTCTCAAATGTCC 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 2 4 9 104 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717402 15717420 GCGGAATTCCAGTTTCGTC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 1 3 3 80 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965138 15965156 CTTGCGATAGTTGATGGCG 59 NA Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 3 2 2 80 X 16161737 16161817 AACACAAGTTCCACTTTACGAG 59 16161678 16161698 GGTTCTCCTGTATAGTTGGCA 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 3 5 5 135 X 16276756 16276774 ATAGCAACCGATTCTTCGC 58 16276572 16276660 CGATCGAATTGATATCCTCCTG 58 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 2 2 2 83 X 16605540 16605561 TGAGCTATCAAGATATGTTCGG 57 16605605 16605697 GTCCAGAGAACCGAAACTC 57 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 1 3 5 80 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717633 CGATTTAGGCCAGTCACTG 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 2 3 3 80 X 17469920 17469939 GTTCAGTTTGGGTTCGAGAG 58 17469785 17469878 GATTATCGGAATGGGCTTGC 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302833 3 1 5 119 X 17635043 17640617 TCATTCGGATACGTCCTATGAG 59 17640697 17640715 AAGAAGTTGGTGAAACGCG 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300977 1 1 6 81 X 17794789 17794809 GATCAAAGTGGACGAGTTCAC 59 17794850 17798651 AGTACGAATCTGGGTGAATCC 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 1 8 8 83 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844725 17844744 AATGATGGCGATTATGTCGA 57 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593 3 1 2 96 X 18412047 18412863 GTTCGAGCTGAAGGAAGTG 58 18412921 18412941 CCTCATCGATAGGATCTCACC 59 NA Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 3 2 2 96 X 19177103 19177122 TATTGCTCACTGGAGAAGCT 58 19176960 19177044 GAATGAGACCAATGAGCGG 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 2 4 4 80 X 19237156 19237177 CTAACACTCATGCAGATTATCG 57 19236862 19236943 GTTCCATTCCAATTTGAGCC 57 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 3 2 5 80 X 19455820 19456735 AGTTCATCCAGATTGAGACC 57 19455759 19455779 GGGTAAATTCCAGATCAAAGC 57 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 3 4 5 80 X 19905586 19920747 CTACTTTCTGGTAAATGGAGCC 58 19905527 19905548 GTAGAGCATATCACATCCATGG 58 NA Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 1 2 2 80 X 21241688 21241710 CTCATATTCTGCAAGAGACATCG 59 21241747 21241838 AAGTATCTTTGTAATGGCACGG 59 NA Nonspecific Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 2 5 8 83 X 21247628 21247646 CTAATACGCGCCTATCTCG 57 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053 3 1 2 123 X 21485747 21485765 GAACCGCATCTTCGATCAC 59 21484970 21485660 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 2 3 3 77 X 11985503 11985522 TATACACCAACTGAGTGCAG 57 11985623 11985641 GTGAACGGGATTCACTAGG 57 NA DesignNoJunction Drosophila melanogaster 61 snmRNA:430:CR33736 FBgn0053736 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33745 FBgn0053745 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A1576 FBgn0025881 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-612 FBgn0082953 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-276b FBgn0067716 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31167 FBgn0051167 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A627 FBgn0086045 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-3436a FBgn0086668 FBtr0091752 1 1 1 60 X 6636816 6636834 GCTCCATTCTGGACAACTG 58 6636774 6636793 TTAGCAAGGCTTTGGATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3436b FBgn0086602 FBtr0091803 3 1 1 114 X 6636486 6636504 GGTGGTTATCCTCCATGGA 58 6636390 6636408 CAAGGTTCAGGTAGAGACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300634 2 1 2 70 X 7792957 7793174 TATGTGCATATTCGTGGCC 58 7792905 7792923 TTATTGCAGCGTGGATGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 lcs FBgn0028583 FBtr0077220 2 1 1 60 X 21267911 21267930 CACTACAGAGTCCTCTACGG 58 21267870 21267889 TTATTCTGTGGAGGATGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 1 2 2 113 X 20539511 20540146 GCAGCAATTGTGTTTCTATGG 58 20540221 20540239 ACTGTTGTCTCTACTGCCT 58 NA Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0077310,FBtr0300210 2 2 2 125 X 20340472 20340552 AATCGAACAGACACGAATGG 58 20340640 20340658 TTGTAGACGAACTCGTGGG 59 NA Drosophila melanogaster 61 CG12679 FBgn0031103 FBtr0077332 1 1 1 60 X 20247205 20247226 CCATCATACTGGAGGTTATCCC 59 20247166 20247185 TCGGATACCAGGTAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1631 FBgn0031101 FBtr0077297 3 1 1 81 X 20198727 20198809 TATACTAGCGATAGCGAAGATGAG 59 20198849 20198867 ACAGCAGACTGTACATGCT 59 NA Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 1 1 1 146 X 20044852 20044978 ATTGGCTCCAATTGTGACG 58 20048259 20048277 CTCGCACTTGGTGTTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15618 FBgn0031077 FBtr0289978 1 1 1 80 X 19755465 19755556 CGGAGTCAACCTTAAATCTCAG 58 19755406 19755425 TTTCACGTGTCATCAGATCG 58 NA Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 3 2 2 85 X 19752778 19752796 CTTTCGCAGAAGTCGATCG 59 19752845 19752946 CTTTGTTTACCGTTGGGCC 59 NA Drosophila melanogaster 61 Alr FBgn0031068 FBtr0074794 1 1 1 157 X 19643285 19643303 GATTTCAAGTCGTGGTCCA 57 19643503 19643521 GAAATTCCCAGCCTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8051 FBgn0031012 FBtr0074683 1 1 1 80 X 19197559 19197677 TTAACATTCTAGTGACGTTCGC 59 19197500 19197518 TGGAGATTCCTAGACCAGC 58 NA Drosophila melanogaster 61 Mec2 FBgn0030993 FBtr0074669 1 1 1 116 X 19083572 19083684 CGTTGAGATCAAGGATGTCTC 58 19083762 19083780 GACTTCTTCTCACCCTCGG 59 NA Drosophila melanogaster 61 CG7280 FBgn0030966 FBtr0074655 2 1 1 120 X 18741340 18741422 CGTAAAGGGTCTTTCATGGG 58 18741239 18741257 GAAGATCACGTGCTTGGTC 58 NA Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 1 1 1 91 X 18553986 18554004 GTTCCTAACGCAGTTCTGC 59 18554059 18554145 AATCCGATTGCCTGAAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 betaCop FBgn0008635 FBtr0074576 1 1 1 80 X 18276464 18276484 GACTTCTGCAATATCAAGGCC 59 18276336 18276425 GGTTTCGTAAACAATATTGCCG 59 NA Drosophila melanogaster 61 por FBgn0004957 FBtr0074577 3 1 1 60 X 18272898 18272916 TTCCTGGTCATGTACTGGG 58 18272856 18272874 TCATGCCCACAAAGTAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 1 1 1 86 X 17778492 17778674 CAAGCCGAAACATTCAGGG 59 17778724 17778742 ATCCATGTTCGACTGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Socs16D FBgn0030869 FBtr0074473 1 1 1 80 X 17716877 17716895 AAGTTCAAGTCGCAGACCA 59 17716750 17716836 CAGAAAGAAGAGATATCTGCCG 58 NA Drosophila melanogaster 61 CG5800 FBgn0030855 FBtr0074453 3 1 1 103 X 17530778 17530872 TCTCATACCCGTTCTGGAG 58 17530939 17530957 AGATCTGGTAGGCTAGCTC 57 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 1 4 4 229 X 17198190 17198208 CAAGTGAATGCTCAGCAGC 59 17198401 17198746 ATCATCCAAATGGCATCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8675 FBgn0030834 FBtr0074446 1 1 1 69 X 17143353 17143431 AAGTTAAGCAGCGCAAACC 59 17143302 17143320 GTGTGCGACTTACATTGCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13000 FBgn0030807 FBtr0074416 3 1 1 60 X 16842424 16842444 ATCCTCACTGACTTTCTGGAG 59 16842384 16842402 GTTGGTCTGGATGAACTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074292 2 1 2 163 X 16462304 16480970 AAACGAAGTTAAGAGCGCG 59 16462159 16462178 ACCCGTAAGAGTTGATCACG 59 NA InUTR Drosophila melanogaster 61 CG33173 FBgn0053173 FBtr0074093 2 1 1 80 X 15672607 15672625 CAGGATCGTCGATACACTG 57 15672669 15673437 ACCACAAATAGATGCGACG 58 NA Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074200,FBtr0074201 2 2 2 72 X 15639377 15639398 GGACTTTCTCAGCTATGATGAG 58 15639176 15639194 GATGTGCATCGTAACCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8119 FBgn0030664 FBtr0074051 2 1 1 60 X 15556637 15556656 AGTATCCGACCAACAATCTG 57 15556678 15556697 GATGGACGAAGTGCAATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 1 2 2 80 X 15350446 15350466 ATGCTGCTATTCTACAATGCC 58 15350327 15350406 GGTTACGTGATCGTATAGGGT 59 NA Drosophila melanogaster 61 CG12608 FBgn0030630 FBtr0074018 1 1 1 86 X 15237682 15237700 TTCATTCTTGCACACGAGG 58 15237520 15237632 TTTGATTTCACCAGCGCTG 59 NA Drosophila melanogaster 61 CG9065 FBgn0030610 FBtr0073966 1 1 1 229 X 14978544 14978562 CAACAGTGCATCTCAAGGA 57 14978246 14978264 TCTTGTGCGCCTCTATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33178 FBgn0053178 FBtr0073963 1 1 1 109 X 14977067 14977304 GGTATAAGATCTTTCCCAACCAG 58 14977524 14977542 CTCCATGTCATTGCGATGG 59 NA Drosophila melanogaster 61 CG12539 FBgn0030586 FBtr0073987 1 1 1 87 X 14738674 14738692 ATGTCAATCGACTGGTGCT 59 14738549 14738623 TCTCTGGGTACATTCGGTC 58 NA Drosophila melanogaster 61 Ag5r2 FBgn0020508 FBtr0073938 1 1 1 97 X 14677275 14677535 GGATATAACGGACCTGCCA 59 14677196 14677214 CATCCATCGCGATTGTACC 58 NA Drosophila melanogaster 61 CG32595 FBgn0052595 FBtr0073941 3 1 1 81 X 14612773 14612794 ACGACAATATGTCCGATATCCA 59 14612654 14612731 CCATGGATGGATTCCAGGT 59 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073931 2 1 3 159 X 14474872 14474963 ATCACCGAGTTTCAACTCCT 59 14475627 14475645 GTTTCAGTAGCGCATTGGT 58 NA Drosophila melanogaster 61 CG32598 FBgn0052598 FBtr0073918 2 1 1 69 X 14210363 14210381 ATTCGCTGAGAAGTTTCGG 58 14210312 14210332 AGGTAAATCGACTCCTTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13404 FBgn0030559 FBtr0299543 2 1 1 119 X 14160057 14160135 CCAGGAGCTCAAGATGGAG 59 14159956 14159975 CTCAGGTAGAATCCGCTCAG 59 NA Drosophila melanogaster 61 CG32614 FBgn0052614 FBtr0073867 1 1 1 60 X 14026121 14026141 TTGAAAGGAGCTGAGAATCTG 58 14026163 14026181 ATGGCTTCCATGATGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ste:CG33242 FBgn0053242 FBtr0300091 3 1 1 110 X 13947324 13947342 TCTGATACACAGCTGGACG 59 13947172 13947250 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301451,FBtr0301450,FBtr0301449,FBtr0112980 2 5 5 84 X 13549162 13549181 CACCATGGTCATTGAGATCG 58 13549226 13549344 ATTGCGTTCCTTCAAGATTCC 59 NA Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 1 1 1 170 X 13509451 13509725 TTGAGCAAGATGTACAGCC 57 13509299 13509317 ATTGAGCGTTAGGGAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 2 7 10 122 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488364 13488382 CTCGTTCGAGTCCTTGGAG 59 NA Drosophila melanogaster 61 CG32642 FBgn0052642 FBtr0073713 2 1 1 150 X 12853441 12853459 TTTGCGGATGTCAACTACG 58 12853572 12853674 GGATGAGTTCCTTCTTTCCG 58 NA Drosophila melanogaster 61 CG33651 FBgn0053651 FBtr0091628 2 1 1 60 X 12785772 12785790 ACAGACGACCTTAAGGAGG 58 12785730 12785748 AATGTGGTTTGCTCCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1463 FBgn0030406 FBtr0073657 2 1 1 127 X 12505494 12505565 CTAAGACCAGAACTATGCGC 58 12505386 12505406 GAGCTCCTTCTTATGGATCTG 57 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 2 1 1 137 X 12447526 12447655 TGGCAACTACAACTTCGGT 59 12447756 12447774 TACTGCTTGCCATCATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 3 2 2 120 X 12370016 12370191 TCAATATGATCAGAGGTGGCA 59 12370273 12370291 ATTACACTCTCGCCGATCG 59 NA Drosophila melanogaster 61 CG15731 FBgn0030390 FBtr0073670 2 1 1 117 X 12351534 12351730 TCCAGCAATGAAGATCTTTGTG 59 12351438 12351456 GATGGTCTTCACCTCCTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 3 2 2 82 X 11805154 11805174 GAGATCATCACGATAGTCTGC 58 11805037 11805110 ATCGGGTTCAGGATTGGAG 59 NA Drosophila melanogaster 61 p24-1 FBgn0030341 FBtr0073604 1 1 1 80 X 11746499 11746517 GCTGGCGATATCGATAGCA 59 11746356 11746456 GCCTGTTATTCTTCCAGCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 dy FBgn0004511 FBtr0073612 1 1 1 90 X 11666607 11666736 CATGCGAAACAATCACCAG 57 11666535 11666553 TGGTCCCTTGTAGAACTGG 58 NA Nonspecific Drosophila melanogaster 61 CG15209 FBgn0030237 FBtr0073378 2 1 1 61 X 10736360 10736378 ATGAATCCCGAACAGGAGC 59 10736403 10736421 TTATGCTGACGTTGCTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973 3 1 2 89 X 10047908 10047926 ATCGGAAGGATTAGCGGAC 59 10047974 10048054 GGGCTTAGGATAAAGAAATCATCG 59 NA Drosophila melanogaster 61 CG42395 FBgn0259741 FBtr0300046 1 1 1 103 X 9469878 9470225 TTTGGCATTACCCTACTACAC 57 9469795 9469813 CAATTCTCCAGTCCGATGC 58 NA Drosophila melanogaster 61 CG15370 FBgn0030107 FBtr0071310 3 1 1 60 X 9120016 9120037 CCATCATCACACTCATACTCAC 58 9120058 9120076 TCCATAATCGTCGTCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12115 FBgn0030097 FBtr0071341 2 1 1 68 X 9084578 9084596 GTGTTGTCATTCGCCTTGG 59 9084117 9084136 AACATCCTGTTCAACCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10970 FBgn0030078 FBtr0071356 3 1 1 86 X 8963965 8963983 GATTCATTGCCCAGGTGTC 58 8963897 8963916 GGATGAGCTTCTTAAAGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2263 FBgn0030007 FBtr0071190 1 1 1 60 X 8038883 8038904 TATAACTTTGATGCGTTGGGTG 59 8038844 8038862 CTTTGAGCAAGGGATGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14427 FBgn0029931 FBtr0071010 3 1 1 60 X 6935387 6935405 AGGTGGATTTCGAGAAGGA 58 6935429 6935447 GCTAGCAATTGGTAGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3847 FBgn0029867 FBtr0070905 1 1 1 60 X 6241603 6241621 AGATACCGAGGTTGATCCC 58 6241645 6241663 ATCTTCTTGAACGTGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32756 FBgn0052756 FBtr0070860 1 1 1 88 X 5840123 5840141 AACTGAAGTATGCCATGGC 58 5840193 5840277 TTGGCTATACAACTGTGCG 58 NA Nonspecific Drosophila melanogaster 61 l(1)G0045 FBgn0026702 FBtr0070782 1 1 1 94 X 5518433 5518519 ATTAGCGGGAGTTCAAAGAG 57 5518575 5518594 ACTTTCGGTAATTGGTACGC 58 NA Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 2 2 2 146 X 5512503 5512608 AAGCCGGAATTGTACAAACTG 59 5512377 5512395 GTACTCGGAGCCGTATAGC 59 NA Drosophila melanogaster 61 CG15784 FBgn0029766 FBtr0070777 1 1 1 60 X 5325569 5325587 GACTATCTAGGCGCGACTG 59 5325611 5325629 TATCCGTATCCTGGTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sas10 FBgn0029755 FBtr0070751 1 1 1 60 X 5211959 5211977 GGACAATGTAGAAGCAGCG 59 5212001 5212019 GGTTATATGGCTCAGCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299602,FBtr0299601 3 2 2 60 X 4676649 4676667 ACAAGACATTCGATCACCG 58 4676607 4676626 TCGTGTCGTACTTTAAAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3568 FBgn0029710 FBtr0070676 3 1 1 119 X 4438202 4438280 TTTGGGCGAATATGCTAATCAG 59 4438360 4438378 CAATGTGCAGATTGGCTCC 59 NA Drosophila melanogaster 61 CG15577 FBgn0040904 FBtr0070660 2 1 1 60 X 4170863 4170883 CCTACTGAGGTCCATACTACG 58 4170823 4170842 CTCTTTGTCACTCATGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10793 FBgn0029656 FBtr0070536 3 1 1 60 X 3209720 3209740 GTCAAGACATCGATATTGCAG 57 3209680 3209698 GATTTCCGCAAACATCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx4 FBgn0024980 FBtr0070494 1 1 1 80 X 2635859 2635943 CGAACTTTCAACGAGAACG 57 2635797 2635815 GTTGAATCGCGTCATTAGC 57 NA Drosophila melanogaster 61 eIF2B-beta FBgn0024996 FBtr0070479 2 1 1 80 X 2598892 2598910 ATAACCAACAAGACGCTGG 58 2598954 2599041 AATCTGCATGAGAGCATCG 58 NA Drosophila melanogaster 61 tko FBgn0003714 FBtr0070459 1 1 1 291 X 2337771 2337789 TACGAAACAGTTGGCTTCG 58 2336497 2336515 AATGTTGTGCTCTTGCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 2 1 2 97 X 2101644 2101662 TACACCAAGATCCTCTGGG 58 2100495 2101583 TCAGTATTGTCGTGACACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18031 FBgn0023550 FBtr0070423 3 1 1 83 X 2097029 2097173 ACAAGAAAGTTGATCATGGGC 59 2096966 2096984 ATGGCGGTAGTCATTCACC 59 NA Drosophila melanogaster 61 CG17777 FBgn0040900 FBtr0290085 1 1 1 143 X 2080965 2081190 AAGTTCTTGTGCGTGTTCG 59 2081297 2081315 GAACCCGTAGATGCCTCTC 59 NA Drosophila melanogaster 61 CDC45L FBgn0026143 FBtr0070182 2 1 1 85 X 923504 923523 GCCTCCAAGATAACCTTCGA 59 923386 923456 TAGCGGGAATACCTCATGG 58 NA Drosophila melanogaster 61 arg FBgn0023535 FBtr0070088 2 1 1 86 X 420627 421602 CAATGGATACCATCGACCG 58 421652 421670 TGACGTGGATCTTGTTCTG 57 NA Drosophila melanogaster 61 Exp6 FBgn0001337 FBtr0070098 2 1 1 80 X 367847 367867 GCAAGCAATCGTTTGTATAGC 58 367729 367806 TTGAGCGTATAGGTTGTCCA 58 NA Drosophila melanogaster 61 Exp6 FBgn0001337 FBtr0070098 1 1 1 80 X 369340 369816 GTACTTCTACTCCTGCATCTCC 59 369281 369299 TGGCATACAGCGATTAGCA 59 NA Drosophila melanogaster 61 CG12470 FBgn0040371 FBtr0070069 2 1 1 161 X 201914 202131 TTTAGCTAGTTGACGTCAGGA 58 202254 202272 TTGCCCTTCTTTCCTTTGC 59 NA InUTR Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107 2 1 2 81 X 139599 139720 CGTAGAATGGATTCAAGCCAG 59 139538 139559 GGTTAGATGGATTCCTCTTCGT 59 NA InUTR Drosophila melanogaster 61 Su(Ste):CR42426 FBgn0259857 FBtr0300154 1 1 1 92 U 7795355 7795373 GATACACAGCCATGTTCGG 58 7795281 7795299 TTACTTACTGTGGGTCGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JYalpha FBgn0040037 FBtr0299529 2 1 1 70 4 25092 25110 TTCGAGAAGACTGGGACTC 58 25143 25226 CCTGTAGGTCCATTCTTGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi18S-301 FBgn0083039 FBtr0113583 2 1 1 70 3R 16400694 16400713 AAACTGTGTCGATTACCGTG 58 16400746 16400764 CATGTCTGAGTCTTACGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-291 FBgn0065064 FBtr0091755 3 1 1 61 3R 7049447 7049465 TATTCCAGTAACGGTGCGG 59 7049487 7049508 GTACGTGATATGGTTTAACCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mod FBgn0002780 FBtr0085874 3 1 1 83 3R 27879266 27879353 ACCTACCAAACGAGTATCTCC 59 27879398 27879416 TAGTGAAACGCTGCAAAGC 59 NA Drosophila melanogaster 61 spn-F FBgn0086362 FBtr0085760 3 1 1 135 3R 27081682 27081768 AATCGCATAGCACTCAAGC 58 27081867 27081885 GTCCATTGTGTTGGCTCTC 58 NA Drosophila melanogaster 61 CG31016 FBgn0051016 FBtr0300962 2 1 1 80 3R 26433631 26433652 ATAGAAAGTCCTACGACTACGA 58 26433691 26433777 GTGTCATTACCAACTTTGTGC 58 NA Drosophila melanogaster 61 PH4alphaMP FBgn0026190 FBtr0085689 3 1 1 80 3R 26318970 26319354 TAAATATGGTACGGCCATGTC 58 26318910 26318928 GTGTGGTTGTAATCTCGCA 58 NA Drosophila melanogaster 61 CG18404 FBgn0039761 FBtr0085618 3 1 1 87 3R 26079238 26079256 ATTATATGCAACCCGAGGC 57 26079304 26079392 GTAATGGCATTAGCCAAATCTC 57 NA Drosophila melanogaster 61 CG42558 FBgn0260760 FBtr0301257 3 1 1 80 3R 25759743 25759761 GTCACAACTGCATTTCTCG 57 25759805 25759972 ATCGCTGGCATTAAATTGC 57 NA Nonspecific Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 2 3 3 87 3R 24852819 24852839 CAAATGCTCTAAGCTTGACCA 59 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302516 1 1 3 84 3R 24852720 24852801 TCATAGAGTATCTGCGAAATGG 57 24852657 24852678 TGTTATTATCCAGAGAAGTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14529 FBgn0039609 FBtr0085328 1 1 1 60 3R 24699199 24699218 CCCAGATTAAACGCCTACAG 58 24699241 24699259 GCAAACTCATCGCTCTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9989 FBgn0039593 FBtr0085307 2 1 1 80 3R 24496944 24497012 ATCGCTACGTAAACACCGT 59 24497055 24497074 CGTAGGCATTGTCAAATCCA 58 NA Drosophila melanogaster 61 CG31051 FBgn0051051 FBtr0085296 2 1 1 82 3R 24346111 24346130 ATAGCGAGGACAGACAATCC 59 24345977 24345995 CATATGTTTGGGTGCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 mfrn FBgn0039561 FBtr0085266 2 1 1 80 3R 23770727 23770807 TCAACTACGTGATTTCGGG 57 23770665 23770684 TACGCTGTTTGATCACATCC 58 NA Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085195 2 1 2 190 3R 23484412 23484432 CTACGAGGACTTCATTGAGTG 58 23483669 23484200 CGAGGAATGGAGAGTAGGG 58 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 1 4 4 158 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463920 23463939 CACGCTGTAGCATATCAGGA 59 NA Drosophila melanogaster 61 CG5934 FBgn0039505 FBtr0085158 1 1 1 95 3R 23099599 23099694 ATCCACAGGTGGTCATTCC 59 23099753 23099771 GGTTGGTGAACGATGAACG 59 NA Drosophila melanogaster 61 CG5909 FBgn0039495 FBtr0085114 3 1 1 108 3R 22987238 22987257 CTTCGTGCAGAAGATTCTCG 59 22987327 22987470 ATGGAAGTCCCTCGTATTCG 59 NA Drosophila melanogaster 61 Ets97D FBgn0004510 FBtr0085088 3 1 1 102 3R 22738302 22738320 TGTTCGAGGATAGCATCGA 58 22738157 22738237 ACAAGTGATTTGAGCATGCT 58 NA Drosophila melanogaster 61 CG14247 FBgn0039454 FBtr0085043 2 1 1 65 3R 22563955 22563973 TGTGTCCCAGCATAAATGC 58 22564002 22564020 TGGACACGAATCCACTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdf FBgn0023178 FBtr0085024 3 1 1 73 3R 22281566 22281584 ATCCTCGAGAACTCCTTGG 58 22281511 22281531 CTCAACAAGGAGTTGATTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995,FBtr0084994,FBtr0084999 3 3 6 177 3R 22082744 22082762 CTCACCTTCTCGTACGGTC 59 22081084 22081102 CGAACAGGGATCCAGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 1 3 3 85 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 1 2 2 60 3R 21637229 21637250 AGTTATCCTCGCTTTCAAAGTC 58 21637268 21637289 CTCATTCTCGTGTATAAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4553 FBgn0039336 FBtr0084839 1 1 1 61 3R 21301931 21301949 CAACGAATTCCGCAAACTG 58 21301888 21301906 GTGGTGTAGGCATCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10562 FBgn0039326 FBtr0084851 2 1 1 163 3R 21147600 21147688 GACAAAGTCAAAGCGTTACAG 58 21147457 21147475 TCGACCAAATACACCTCCT 58 NA Drosophila melanogaster 61 Aats-gln FBgn0027090 FBtr0084866 3 1 1 60 3R 21089162 21089181 AGGTTTACGACAAGTTCCAG 57 21089121 21089139 CTGGTGTCAGGATCTACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bam FBgn0000158 FBtr0084869 1 1 1 90 3R 21069703 21069783 GGACAAGTTCCATACTCAGC 58 21069632 21069652 GTTAAATACGTGCACACTGAG 57 NA Drosophila melanogaster 61 CG31103 FBgn0051103 FBtr0113389 3 1 1 80 3R 21045368 21045457 GTGTTACAGGTATCTTCCTATCG 58 21045495 21045515 CATAGAGTAAGACCCTTCGAC 57 NA Drosophila melanogaster 61 Smg6 FBgn0039260 FBtr0084796 3 1 1 80 3R 20855834 20856089 AGGCAATGTGAAATGTGCT 58 20855772 20855795 GACAAATATTCCTCCTCAACTAGG 58 NA Drosophila melanogaster 61 CG31381 FBgn0043799 FBtr0084711 1 1 1 60 3R 20704207 20704225 GGCTTGCGAGATACTACCA 59 20704249 20704267 CTCCTCATCCAAATCCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7006 FBgn0039233 FBtr0084704 1 1 1 208 3R 20676482 20676552 CTGTCCAAATACATTGGCAC 57 20676722 20676741 GCCGTGATATGGAACTTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5808 FBgn0027617 FBtr0084738 3 1 1 86 3R 20641091 20641111 GAAGGAAGACGTAACGATGAG 58 20640963 20641043 GTTCCTGGATTGTTGCCTC 58 NA Drosophila melanogaster 61 CG13634 FBgn0039224 FBtr0084742 3 1 1 204 3R 20615466 20615485 AATTGGCTGTACTTTCTGCT 57 20615229 20615249 AACTGTGGTACAACTGGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Golgin84 FBgn0039188 FBtr0084629 2 1 1 116 3R 20182200 20182274 GCACAGATGATGTCAAAGCA 59 20182103 20182121 CCCGAATACCCATGGAGTC 59 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0301165 1 1 3 186 3R 19812925 19813003 AGTAGCAGACGATTAGAGGA 57 19813152 19813170 GTTGTAGTGGGAGTTGGAC 57 NA InUTR Drosophila melanogaster 61 CG31365 FBgn0051365 FBtr0084406 2 1 1 80 3R 18950904 18950991 CTATAACATCAAAGAAGACGGC 57 18950845 18950863 AGATTAAACACGACCACGT 57 NA Drosophila melanogaster 61 Or94a FBgn0039033 FBtr0084341 1 1 1 86 3R 18813738 18813817 ATTAGAAGCCTAACCCTGACC 59 18813865 18813883 AAAGCAGATGATCAGGGCA 59 NA Drosophila melanogaster 61 Dcr-1 FBgn0039016 FBtr0084324 2 1 1 80 3R 18560350 18560370 CTTAACGATGTGATTGACCGT 58 18560227 18560312 GGACAATAAGTAGTACTCCTCAC 57 NA Drosophila melanogaster 61 CG5380 FBgn0038951 FBtr0084236 1 1 1 97 3R 18192499 18192517 CAAGAAGCTCATCAAGGCG 59 18192362 18192380 CTCCTCCCGTAATGGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 2 2 2 88 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128542 18128561 AATACACAATGATGGGCAGG 58 NA Drosophila melanogaster 61 Ir94a FBgn0051164 FBtr0084193 2 1 1 60 3R 17940654 17940673 TGCGATATTTAGCCATCACC 58 17940695 17940714 GATCATACCCGAATCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 3 2 2 114 3R 17911577 17911962 CTACGACTGTAATCCACCC 57 17911481 17911499 GTTGTAGTATCCTCCACCG 57 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263,FBtr0084155 3 2 3 169 3R 17693454 17693538 ATTCTCAGCAACTTTGTGCTG 59 17693305 17693323 TTGAGCTCCTGGTAATCGC 59 NA Drosophila melanogaster 61 CG7079 FBgn0038849 FBtr0084043 3 1 1 151 3R 16873953 16873973 GATATCCACTCTCAGGGAACG 59 16873752 16873840 CACATAATCCAGCGGTCCA 59 NA Drosophila melanogaster 61 CG17272 FBgn0038830 FBtr0083992 3 1 1 99 3R 16649579 16649665 ACATTGATGAGTTCCGTGAG 58 16649436 16649454 GAAAGACCCAAAGAACGCA 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299772,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299771,FBtr0299767 2 8 8 105 3R 16575003 16575022 GCGTTGCTAGCCTATATGGA 59 16575088 16575200 GGAACATAACCCTAAACACGG 59 NA Drosophila melanogaster 61 Cpr92F FBgn0038819 FBtr0083919 1 1 1 194 3R 16495457 16496868 AGCCATTCTTTATTGCCGC 59 16497025 16497044 CATCCACGTAGGAGTAGGAG 58 NA Drosophila melanogaster 61 Lrrk FBgn0038816 FBtr0112788 1 1 1 80 3R 16466012 16466102 GAAACAGAAGCTACATTGTCAG 57 16466141 16466161 AGGGTATGAGTAGAGTTCTCG 58 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0300802 1 1 2 83 3R 16405907 16405982 ATTCGAACTTTATCCTGCGC 59 16406028 16406046 CACATCGCTTGAACGTCAG 59 NA Drosophila melanogaster 61 CG15922 FBgn0040575 FBtr0083951 2 1 1 218 3R 16385756 16385775 GTAAAGATGAGCAAGCAGCC 59 16385496 16385514 GAGGGTTTGTCATTCCGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 att-ORFB FBgn0067782 FBtr0090034 1 1 1 139 3R 16379404 16379422 CTTCACCAAGATCTGGGTG 57 16379027 16379303 CGACCACTTCATAGTATTCCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 3 1 1 60 3R 15742695 15742768 TTTGGTGACATAACAGCGG 58 15742653 15742674 AGAAGCAGTCGTAAAGTATGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17186 FBgn0038741 FBtr0083858 3 1 1 200 3R 15702996 15703075 ACGAAATGGAATACTTGCACC 59 15702816 15702834 ACGATTCCACCTCAGACTC 58 NA Drosophila melanogaster 61 CG6300 FBgn0038730 FBtr0083798 3 1 1 138 3R 15598688 15598764 TTACTGCCCAGATCTCTGC 59 15598568 15598587 GTATTCCTGCCTATGATGCC 58 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 3 3 3 88 3R 15480633 15480718 GATTGGGAATGATTTACGCCA 59 15480565 15480583 AATGGGCGAGTTTGTTTCC 59 NA Drosophila melanogaster 61 CG3517 FBgn0038706 FBtr0083770 3 1 1 60 3R 15250532 15250553 CCGTGGACATTATCACATATGC 59 15250493 15250513 GTATCAATGCAATAGCACACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdi FBgn0004876 FBtr0083716 2 1 1 81 3R 14875588 14875608 GGCATTTGTAGAATTGTGTCC 57 14875467 14875545 CTTGGCATCGTACAGACAG 58 NA Drosophila melanogaster 61 Prp18 FBgn0027784 FBtr0083717 2 1 1 60 3R 14856252 14856272 TCATTTACACGCAGACTAAGG 58 14856212 14856232 GTGTGATGCTTTAACTTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5451 FBgn0038666 FBtr0083721 1 1 1 81 3R 14806347 14806421 CTGCAAACGTTACAGGAGG 58 14806284 14806302 CGTTGGAGATATCCTGCAC 58 NA Drosophila melanogaster 61 CG14290 FBgn0038662 FBtr0083723 2 1 1 95 3R 14753838 14753925 CTTTATGAGTACCCACTTCTGG 58 14753764 14753782 CCGGAGATGAATTTGGGAC 58 NA Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083698 1 1 2 230 3R 14732633 14732651 TTCACCAAGCCAATTCGAG 58 14733023 14733042 CGTCATATACTGGTTGGCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 1 4 4 80 3R 13678336 13678354 ATCTGGTACGGAGTGATGC 59 13678397 13678747 CAAAGAGCATCCCAAGAACC 59 NA Drosophila melanogaster 61 CG7713 FBgn0038545 FBtr0083513 3 1 1 80 3R 13621627 13621729 GCCTACAATATCTATTGCTGGC 59 13621768 13621788 CAGCTCAATGTTCGGATTCTG 59 NA Drosophila melanogaster 61 l(3)07882 FBgn0010926 FBtr0083504 3 1 1 80 3R 13363129 13363148 GGTGCCATTCGAGAAATACG 59 13363007 13363086 CTCCTTGTCACTTTGCAGG 58 NA Nonspecific Drosophila melanogaster 61 CG5823 FBgn0038515 FBtr0083505 1 1 1 103 3R 13358914 13358992 TGAGCTTCATGCTGGAGAG 59 13358829 13358847 GTTGCGCAGGTTAAATGCT 59 NA Drosophila melanogaster 61 Eh FBgn0000564 FBtr0083444 1 1 1 84 3R 13272985 13273080 GAGATTTGACTCCATGGGTG 58 13272719 13272737 GTAATCTCCCAGCATGGTC 57 NA Drosophila melanogaster 61 CG31418 FBgn0051418 FBtr0083432 2 1 1 60 3R 13109944 13109962 CGGATTGTTCACGACAAGG 59 13109985 13110004 TTTGTTCCACATCTTCCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083348 2 1 6 104 3R 12484784 12558455 CTATCGCAGGTACAAATGGTC 59 12484700 12484721 GGGTCAGATAATGATTCGTGTG 59 NA Drosophila melanogaster 61 CG17560 FBgn0038450 FBtr0083330 2 1 1 95 3R 12444424 12444442 GTACACCTACACCAAAGCC 58 12444501 12444574 GTGGACATTATGATCGCCG 58 NA Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 1 1 1 112 3R 12308909 12308985 TGAAACGTCTCTTCAATGAGC 59 12308817 12308835 AATCTCTTCCGGTAGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Mat89Bb FBgn0020407 FBtr0083259 1 1 1 100 3R 12091638 12091722 GGAGCAAGACTAAAGCTTTCC 59 12091784 12091802 TTATGGTGCATTGTGGTGG 58 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083057 1 1 6 101 3R 11068436 11068454 CAGTTTGATCGAAGGTGCG 59 11068516 11070097 CAGGAGCTTTAGACATCTTGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG3987 FBgn0038292 FBtr0083026 2 1 1 108 3R 10965774 10966068 ACATTCAATGCTGAAACTGG 57 10966136 10966157 AGGAGTATGTACCACTATTGTG 57 NA Drosophila melanogaster 61 CG33331 FBgn0067628 FBtr0082998 2 1 1 60 3R 10712937 10712957 CAAATCAATGACTTCTTCGCC 58 10712977 10712997 CCACATAGTCGGAAAGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 2 2 2 99 3R 10156792 10166952 GAAACGCAGGTAAAGATCTGG 59 10156713 10156732 CATTCGAGGATTTGTGCTCC 59 NA Drosophila melanogaster 61 Cyp6d5 FBgn0038194 FBtr0089766 3 1 1 120 3R 9856499 9856608 TATACTCGAGACTGCTCGC 58 9856689 9856710 GGAGATTATGATGGGAGTACCC 59 NA Drosophila melanogaster 61 wntD FBgn0038134 FBtr0082775 1 1 1 60 3R 9118777 9118796 TGAGCTACTACCAGTACACC 58 9118736 9118754 TTGCCGGTTATATCCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8508 FBgn0038123 FBtr0082783 2 1 1 60 3R 9011516 9011536 CCCTTTGAACTCAAGTTTGGT 59 9011476 9011495 ATTTATCCACATTGCCACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8031 FBgn0038110 FBtr0082719 3 1 1 102 3R 8834856 8834934 GATGGAGGACTACAAGGATCAG 59 8834775 8834793 CAGATACGAGGACAGCAGG 59 NA Drosophila melanogaster 61 CG5167 FBgn0038038 FBtr0082583 1 1 1 60 3R 8233259 8233277 GCCTACATGACGTATCCCT 58 8233301 8233319 TGATAGAGGCGAAGAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tk FBgn0037976 FBtr0082488 3 1 1 91 3R 7821154 7821172 GCCGGTCAATTCCTTTGTG 59 7820878 7821102 TCAAGTCATAGGAATCGGAGAG 59 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272,FBtr0082485 2 2 2 65 3R 7797715 7797734 AATAGGTCCCAATGGAGAGC 59 7797833 7797851 CTGGCGATAGTCTTTCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Ho FBgn0037933 FBtr0082424 2 1 1 98 3R 7506225 7506243 GACAAAGACGACTTGGAGG 58 7506302 7506378 TAAGACAGAGATCTTCTCAGGA 57 NA Drosophila melanogaster 61 CG6672 FBgn0037875 FBtr0082371 1 1 1 92 3R 7039589 7039678 ACAGTTTGGGCCTGATCTC 59 7039515 7039534 TCCACTTGGTGATAACCGAC 59 NA Drosophila melanogaster 61 CG14696 FBgn0037853 FBtr0082332 1 1 1 106 3R 6709204 6709282 GGCTCGAGTATAAGGAACCC 59 6709117 6709135 ATAAGAGGTGCTCACGTCC 59 NA Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201,FBtr0300045 2 2 2 68 3R 6675706 6675724 CATGTGCAAGTGTCTGGTC 59 6677018 6677039 GAAACAAGCACACTAATTGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082277,FBtr0082276,FBtr0082275 1 4 4 73 3R 6610338 6610356 TATAGGGAGTGGGACTTGG 57 6610393 6610411 TCTATCTCGTGCTTGGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273,FBtr0302571,FBtr0301310 2 4 4 114 3R 6590906 6590975 GACGACTGCTCATTGATCC 58 6591053 6591071 AAATGTCCAGGATCTCGGT 58 NA Drosophila melanogaster 61 jumu FBgn0015396 FBtr0082237 2 1 1 80 3R 6185607 6185686 ACTTCGATATAGAGGTCGGG 58 6185729 6185747 TCGAGATAATTCGACGCAC 57 NA Drosophila melanogaster 61 Npc2d FBgn0037782 FBtr0082202 3 1 1 86 3R 5881766 5881784 GGTTCTGATCTCCCTAGGA 57 5881631 5881717 CTTCCGGAACATTTCTTCAC 57 NA Drosophila melanogaster 61 CG11722 FBgn0037777 FBtr0082205 2 1 1 94 3R 5870914 5870932 CAAGTTCGTGGACAAGCTC 59 5870772 5870859 CTCGCTTGATAAATCGATCCTG 59 NA Drosophila melanogaster 61 CG9461 FBgn0037760 FBtr0082155 1 1 1 80 3R 5632007 5632025 TTTATGTGCACGAGAACGG 58 5631882 5631963 AGGTTATCCAGACACCTGC 59 NA Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082078 1 1 2 91 3R 5457496 5457514 CGGTCAGTCATTCTCCCTG 59 5457567 5458109 CATAGGTTTCGGTTTCAACGA 59 NA Drosophila melanogaster 61 CG9393 FBgn0037710 FBtr0082113 3 1 1 115 3R 5388622 5388640 TTCTACTACCCGTCGTCCT 59 5388279 5388544 GCATTGACAACGAGGTAGTC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 1 2 4 109 3R 5180479 5180498 TGGAACGTGAATCTAACCCA 59 5180568 5180658 TCTAAGCGAGTCCTTATAGCA 58 NA Drosophila melanogaster 61 tgo FBgn0015014 FBtr0082005 2 1 1 104 3R 4845607 4845626 ACCAAGTACCTCTGTACACC 58 4845380 4845398 TGTCCTGTATGTTCGCCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11985 FBgn0040534 FBtr0082006 2 1 1 60 3R 4840818 4840837 CAACTACTTTGCCATAGCGG 59 4840777 4840799 CTCCATCAGATTAAATCGCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8202 FBgn0037622 FBtr0081914 2 1 1 81 3R 4559077 4559097 TACCCTAACGTCGAGTAAGAC 58 4559139 4559218 CACGAAGCGAAAGATCTGAG 59 NA Drosophila melanogaster 61 CG9603 FBgn0040529 FBtr0081855 3 1 1 104 3R 4166490 4166649 ATGAACCTGTCGAGAGCTG 59 4166404 4166422 GCGGATCTCGAAGTATCCC 59 NA Drosophila melanogaster 61 CG11693 FBgn0037570 FBtr0081860 3 1 1 61 3R 4134875 4134893 CTTATGCAGCTCGACTGGA 59 4134832 4134850 GGACAAGGTAGCCTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7878 FBgn0037549 FBtr0113205 1 1 1 80 3R 3949158 3949179 CTGAGTCCAATAAGGACAATGG 58 3949220 3949293 CAGTAGCTGCTATCGAAGC 58 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 2 2 3 199 3R 3785499 3785519 ATCTCAGTTTCCGTCAATCGA 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG18268 FBgn0037520 FBtr0081772 2 1 1 102 3R 3629760 3629890 AAATTAGAGGGCGTAAGTGTC 58 3629678 3629696 TTCCGGTGCTATCATTGTG 57 NA Drosophila melanogaster 61 Ubc84D FBgn0017456 FBtr0081552 2 1 1 60 3R 3344906 3344924 ATCGAAATCAACTTCCCGC 58 3344864 3344885 TCGTCTTGAATAGGATCTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gld FBgn0001112 FBtr0081596 3 1 1 117 3R 3083201 3091095 TCTACGATCTCTATCAACATGTCC 59 3083107 3083125 CCATGAACAGCATGAAGGC 59 NA InUTR Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 2 4 11 87 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Pif2 FBgn0046873 FBtr0081676 3 1 1 84 3R 2374793 2374814 TGTAGGTAAATAGTCACACGGA 58 2374859 2374938 TTCGATTCGTGCTTGAACC 58 NA InUTR Drosophila melanogaster 61 CG15185 FBgn0037449 FBtr0081675 2 1 1 60 3R 2354118 2354136 CACTTCGTTCCTCAGACCA 59 2354159 2354178 TGAGCATTATGCCTAACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31367 FBgn0051367 FBtr0081736 3 1 1 122 3R 2187626 2187737 AACGACAAGCGCTATTTGG 59 2187522 2187540 CGTTGACTCAGATGCTGTG 59 NA Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 2 2 2 94 3R 2037879 2037897 CCATTCGAGTACTCCGAGG 59 2037955 2038122 GACTTGATGAAGCGTTCGG 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 3 3 3 80 3R 1536524 1536545 ATCACCTAGAAATGCTTAACCG 58 1536583 1536671 CAATCGAAGATTGAGCAAACTG 58 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 2 3 3 122 3R 1314883 1314902 GAAACCAAGGACTTGGTGTC 59 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 CG31538 FBgn0051538 FBtr0078819 1 1 1 60 3R 1102988 1103006 GGAAGCACCCTCTACAGTC 59 1102946 1102967 GACTCGAATATTCCTCGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829 3 1 3 138 3R 1049082 1049101 CAGAAGAGCTTCGACTTTGG 59 1048860 1048981 GTAAGTCGCCTGTATCGCT 59 NA InUTR Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 3 4 4 80 3R 534701 534721 AGTCCATCGAGGATAAGATCC 58 534763 534891 GTTCCTCTTGCGAGAAGTG 58 NA Drosophila melanogaster 61 CG33927 FBgn0053927 FBtr0091931 1 1 1 102 3R 516200 516272 TTGGGTCTATTAATGCTTCCAG 58 516119 516139 CGAATTGCCTTTAAACGACAC 58 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 1 2 2 88 3R 225227 225245 AACTTCCTGTGGGTTCCAC 59 225097 225176 ATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078955 3 1 2 121 3R 159037 159056 TAACTCGTTTCCACCTCAGG 59 158873 158954 GACCGTACACATTTACGTCC 58 NA Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0111222,FBtr0078978 3 2 2 60 3R 93725 93745 CAGTGGGATATACGATCAGGA 58 93767 93785 ACGCTTGTTGTCAAGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A576 FBgn0086080 FBtr0114356 1 1 1 60 3L 17559216 17559234 TAATTGGAACAGCAACGGC 59 17559174 17559195 GCTTCAATCACCAGAATAATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1837a FBgn0086660 FBtr0091629 3 1 1 60 3L 5757425 5757445 CAACACTTGCAAAGATCAGCT 59 5757385 5757405 CAGTCCTGAATAATAGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18217 FBgn0036646 FBtr0301925 2 1 1 94 3L 16595715 16595733 AATGGACAGAAGCAGTGGA 59 16595580 16595660 GCCGAAGACTCTTTAGATTGTC 59 NA Drosophila melanogaster 61 CG42552 FBgn0260754 FBtr0301251 1 1 1 154 3L 21770881 21770963 TATATCTCCGAACACGCAGG 59 21771078 21771098 ATATTGAGATGCCACAAGGTG 58 NA Drosophila melanogaster 61 CG11306 FBgn0037108 FBtr0078422 3 1 1 80 3L 21620493 21620574 TCTCAAGAATGTACAAGTGGG 57 21620614 21620634 GCAGAATATGATTCTCGGTCC 58 NA Drosophila melanogaster 61 CG10510 FBgn0037059 FBtr0078310 2 1 1 80 3L 21201947 21201965 AGATGGATCGCGAGATCAC 59 21201830 21201904 GCTTCTCCATTTGCTTGGTC 59 NA Drosophila melanogaster 61 Ac78C FBgn0024150 FBtr0301701 2 1 1 80 3L 21133340 21133423 TTCCGTTCAAGAACCTTAACAG 59 21133281 21133303 TATGATCCTCCTTCGTATCAACC 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 3 4 4 83 3L 20959607 20959683 TATTGATGATGCCGTCGAG 57 20959542 20959563 TCACAAGCCAAGTAACTATTCC 58 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 2 2 4 80 3L 20769143 20769286 GGATCTTTAAGGAATTGGGAACTC 59 20769325 20769343 ACAACATGTTCTTCACGGC 59 NA Drosophila melanogaster 61 Rcd2 FBgn0037012 FBtr0078213 3 1 1 80 3L 20522850 20532013 ATTCTACAATCGTGTGCTATGC 59 20522791 20522809 GTCATTCTCACACGGTGGA 59 NA Drosophila melanogaster 61 mRpL15 FBgn0036990 FBtr0078227 1 1 1 126 3L 20429005 20429094 AAACAGAATGACAAGCGCG 59 20428897 20428915 AGTAGAAGGGCTGATTGCC 59 NA Drosophila melanogaster 61 CG5665 FBgn0036977 FBtr0078182 3 1 1 90 3L 20352062 20352081 AACACCGTAAACGAATCCTC 58 20352134 20352204 CAGCCGCATCTACAATCAC 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 3 4 4 81 3L 20254921 20254939 TTTCCCAACAAGTTACGGT 57 20254984 20255059 GGAAGACCGTTCTTATGCA 57 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 3 4 4 110 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620469 19620547 TAGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 Cpr76Ba FBgn0036878 FBtr0074977 1 1 1 60 3L 19511350 19511368 ACCAATTGAGCATCCTCTG 57 19511308 19511326 TGAGGGATGTAGCTAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 3 2 2 292 3L 19103338 19103356 AGAGATTCAACCACCTGCA 59 19101362 19101380 GTTCAGACTCAGGTTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32202 FBgn0052202 FBtr0075051 3 1 1 88 3L 18675401 18675419 ATGTACAAACAGCTGGTGG 58 18675468 18675550 ATCCCATTTACTCTCATCACAC 58 NA Drosophila melanogaster 61 CG7320 FBgn0036782 FBtr0075128 3 1 1 120 3L 18194852 18194933 GAACAGTATGTGGTCTACAACG 59 18195013 18195032 GCATCTGCCGATAATGATCG 59 NA Drosophila melanogaster 61 CG14353 FBgn0036771 FBtr0075144 1 1 1 124 3L 17901621 17901697 CAAGTTCTGGATATGGAGCAG 58 17901783 17901801 GTAACGATTTCCGGAGCAC 59 NA Drosophila melanogaster 61 CG7430 FBgn0036762 FBtr0075140 3 1 1 89 3L 17842039 17842057 CTCATTAACGAGGCTGTGC 59 17842110 17842191 CTCGGAACATGTTGGATGC 59 NA Drosophila melanogaster 61 CG5589 FBgn0036754 FBtr0075170 1 1 1 80 3L 17797645 17797720 CTTCACCAAGAAGTCAAAGAAGG 59 17797587 17797607 GGCTCCTCATGTTTAGAAACC 59 NA Drosophila melanogaster 61 CG7510 FBgn0036741 FBtr0075182 2 1 1 80 3L 17621435 17621535 ATGACCTATTCACAATCATCCG 58 17621576 17621594 GATGGACGATTGATCCGTG 58 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 3 2 4 94 3L 17591984 17592003 CCTTTATCGACGATGCACTG 59 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 3 7 7 81 3L 17537429 17537447 GTTCGGTAACGAAGACCGA 59 17537491 17537573 AGGCCTCCATAATCTAAGCC 59 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 3 2 2 81 3L 16571601 16571686 GCTACTACAAGTACATTAACACGG 59 16571543 16571563 CAATTGTTTACCAGGTGTGCA 59 NA Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 1 2 2 80 3L 16382907 16382926 ATGAATCACAGATCGAACCG 58 16382967 16383045 CTTGGTAGGACTGTCTATTGG 57 NA Drosophila melanogaster 61 CG13060 FBgn0036606 FBtr0075370 2 1 1 63 3L 16313030 16313110 TCAAATTTATCGGCGTCATCG 59 16313135 16313153 TGAGTCTCGATGAGACCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13066 FBgn0040797 FBtr0075467 1 1 1 92 3L 16266453 16266471 ATGCCAGTAGCTACAGTGC 59 16266527 16266545 ACTTCTTGAGGATGGTGGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13069 FBgn0040798 FBtr0075463 1 1 1 71 3L 16258704 16258722 TATGTGGCTTCTCCCTACG 58 16258757 16258775 AGATGCCACATACGGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13053 FBgn0040801 FBtr0075480 2 1 1 81 3L 16252432 16252518 TTATCTCTGGTTAGCAGTGCT 59 16252371 16252389 GTAGCTGACACCGAAGGAG 59 NA Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075486 1 1 2 73 3L 16207000 16207018 ATCGAATGCAACTGGAAGC 58 16206701 16206719 CTATATGAACACGGCGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5222 FBgn0036570 FBtr0075495 1 1 1 149 3L 16098582 16098662 TGCGATTGTATTGTCTCAGC 58 16098452 16098470 TGGACCACTTCAGTGACTG 59 NA Drosophila melanogaster 61 DNApol-delta FBgn0012066 FBtr0075522 3 1 1 104 3L 15980701 15980773 AAGAAGCCCAGGAATCCTG 59 15980615 15980633 ATCGCCCATTAGCAGAGTC 59 NA Drosophila melanogaster 61 Eig71Ef FBgn0004593 FBtr0075584 3 1 1 150 3L 15650341 15650359 TCCTTGCATCCGAAGACTC 59 15649893 15650228 CAGTTTCCTCTTGTGAGCAC 59 NA Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075633,FBtr0075632 2 2 2 60 3L 15090484 15090502 ACACTCTAAAGGAACCGCA 59 15090523 15090544 CGCACCTGTTTCATAGTATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5114 FBgn0036460 FBtr0075624 1 1 1 84 3L 14977146 14977164 ATCCATCTGGGACTATGCC 58 14977209 14977320 CCATTTGATCCTTATGACAGCA 58 NA Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 1 1 1 124 3L 14887314 14887334 GATCTTTACCAAGTATCGCCA 58 14887087 14887230 AACTCTGTCGTTTGGTTACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13471 FBgn0036443 FBtr0075709 3 1 1 60 3L 14726417 14726437 TGGGAAGTACATCGGATTCAG 59 14726377 14726396 GTGGTTGATAACGATAGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 D FBgn0000411 FBtr0075746 1 1 1 60 3L 14171688 14171709 AATTATTCGATTGCCCTTGTCC 59 14171573 14171592 ATGTAGAACGGTCCTCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 3 3 3 82 3L 13222208 13222227 ACAAACTAGCCACGAATTGC 59 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 CG10754 FBgn0036314 FBtr0075944 1 1 1 60 3L 12806362 12806380 CAGTTCGCCTTCAAGTTCG 59 12806320 12806338 CCCTATGTAGATTCGGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp1 FBgn0011279 FBtr0075955 2 1 1 80 3L 12389449 12389470 ATCCTACGATCATAAAGCAGGT 59 12389508 12389594 TGTCAATCACATCTACAGAAGC 58 NA Drosophila melanogaster 61 CG7252 FBgn0036226 FBtr0076041 2 1 1 62 3L 11940817 11940835 GAAGAATGCGACCAATCGA 58 11940921 11940939 GAAGACCTCCGATAAGCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42630 FBgn0261353 FBtr0302271 2 1 1 62 3L 11702321 11702339 CAACAATCTACTGACCGCC 58 11702365 11702383 ATGGAGTAGCCGTAGATGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32081 FBgn0052081 FBtr0076198 2 1 1 80 3L 11021751 11021769 TGGGATACTGGCGTTATGG 59 11021811 11021890 CAACTTGCGAAAGTACTTCGT 59 NA Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 1 2 2 114 3L 10877752 10877844 AATGAAGGAGTCCTGGGAC 58 10877656 10877674 CTTGTACGTCTTGACCAGC 58 NA Drosophila melanogaster 61 Hsp22 FBgn0001223 FBtr0100559,FBtr0100558 1 2 2 60 3L 9367531 9367550 AAGGATGGCTACAAACTCAC 57 9367573 9367591 GCACCTTGACCTTTAGCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 3 3 6 86 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338987 9339006 AGTTGTAGCCTATGTGGTCC 59 NA Drosophila melanogaster 61 nwk FBgn0035966 FBtr0076532 3 1 1 83 3L 9131790 9131884 CGCGTAAGGGAAACTATGTG 59 9131927 9131948 ATTCATGCTGATTCTTCAGCTG 59 NA Drosophila melanogaster 61 ZC3H3 FBgn0035900 FBtr0076656 3 1 1 98 3L 8501328 8501444 CATCTGTGTCAGCTTTCTGC 59 8501249 8501268 AAATAGTACCGACAGACGGG 59 NA Drosophila melanogaster 61 CG8006 FBgn0035857 FBtr0076698 1 1 1 60 3L 8205968 8205986 GGATTGCTGATGCGTAGAG 58 8206009 8206028 CATCCGAGTTGTAGTATGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42445 FBgn0259916 FBtr0300199 1 1 1 142 3L 8148673 8151870 GGATGAATAATGCGAAAGCCA 59 8148551 8148569 CTCAATGGTCAGCCATTGG 58 NA InUTR Drosophila melanogaster 61 CdsA FBgn0010350 FBtr0076688 1 1 1 80 3L 8122640 8122723 ATGATCACGACGTTACTGG 57 8122765 8122785 GCCATGAATTCGATAAACCTG 57 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767,FBtr0076766 3 2 2 187 3L 7966905 7966923 GAATCCGAGGAAAGGTTGG 58 7966670 7966754 CGCTTAATCTGTTCCTGCA 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 3 7 7 149 3L 7811288 7811309 AATAGCAAAGAGATCATCTGCC 58 7810754 7811179 GTCGGCATATTGTGTTACCT 58 NA Drosophila melanogaster 61 CG8564 FBgn0035776 FBtr0076869 1 1 1 82 3L 7379772 7379854 GCACCAAGAATCCCAAGTG 59 7379708 7379729 GTAATTTCGGTTGCAATCAGTG 58 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 1 4 5 60 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7361034 7361052 GATGTTCTTGCTGTCCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14834 FBgn0035768 FBtr0076880 3 1 1 60 3L 7339874 7339893 TGTAATGACGACCAATCCGA 59 7339833 7339851 ACGTCTTGGCATTCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8607 FBgn0035760 FBtr0076837 2 1 1 225 3L 7313452 7313533 GAAACACCAACTGGATGCC 59 7313722 7313740 CTCAGCGCGTATAAACTGC 59 NA DesignRelaxed Drosophila melanogaster 61 unc-13-4A FBgn0035756 FBtr0290001 2 1 1 80 3L 7262648 7262791 CGAATGTGCATAAGCGTACTC 59 7262588 7262606 CGGTCAAACATTGCTCCAG 59 NA Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0076918,FBtr0273402 1 2 2 60 3L 7151518 7151538 CTGAACGATGTGATGAAACAG 57 7151558 7151578 TGATGGAGAGTTGAGATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 melt FBgn0023001 FBtr0100141,FBtr0302044 3 2 2 80 3L 7135159 7135241 TTCCTCAGGTTAAGGACCG 58 7135285 7135303 TCTTGGAGACCTCGAACAC 59 NA Drosophila melanogaster 61 CG10064 FBgn0035724 FBtr0076937 3 1 1 80 3L 6959184 6959204 ATATCAACTATCTCGACACCG 57 6959061 6959142 GGGTCATGCGTTTAATGTC 57 NA Drosophila melanogaster 61 CG32394 FBgn0052394 FBtr0076955 3 1 1 81 3L 6730573 6730648 TCCATCATCAGGAGACCCA 59 6730510 6730530 GGAATTCGCTGAACTTATGGT 58 NA Drosophila melanogaster 61 Glu-RI FBgn0004619 FBtr0076982 1 1 1 80 3L 6617730 6617748 TGGCCGGAATTTAGTTCAG 57 6617790 6619534 TTCGAAGATTGCACCTAATGG 58 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 2 2 2 94 3L 6600094 6600114 CACCAACAGGATATTCAGCAC 59 6600167 6600244 TGAGAGGAATCTTGGCTATCTC 59 NA Drosophila melanogaster 61 Jon65Ai FBgn0035667 FBtr0077067 3 1 1 60 3L 6047395 6047413 AAGGTAGGATCACCATGGG 58 6047353 6047371 AAACCGACAATGTAGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 1 2 2 80 3L 5810733 5811005 CTCACCAGTTCACTTTCCC 58 5810671 5810689 CAGGTGCCATTATGGAAGC 59 NA Drosophila melanogaster 61 CG10630 FBgn0035608 FBtr0077152 3 1 1 82 3L 5491876 5491897 GAGATGAAGAAGGCATTGATCC 59 5491647 5491836 TTCTTCAAATTATCTGCGAGCG 59 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 3 2 2 140 3L 5358154 5358172 TTTCCGCTTACTGGAGGAG 59 5357299 5358050 TCGAATGGTGTTCTAGGCG 59 NA Drosophila melanogaster 61 CG34266 FBgn0085295 FBtr0112461 3 1 1 68 3L 4677960 4677978 TTATAGCCGAGCAAAGGCA 59 4678010 4678028 TCTCCCTGTTGAGGATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr64Ac FBgn0035512 FBtr0073252 2 1 1 138 3L 4212794 4212874 CATGATTGCCCAGACTCTG 58 4212674 4212692 ATAGGAAATGGCAGGAGCA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300989 3 1 2 146 3L 4069446 4069537 TATTATCCAGCACGCTTGGA 59 4069705 4069726 ATCCTTATTGCTACGATTTGGG 59 NA InUTR Drosophila melanogaster 61 Gr64f FBgn0052255 FBtr0073201 3 1 1 84 3L 4036805 4036824 GATTGTGAGCATTGGACTGG 59 4036868 4036939 AGATGGAGCCATATTCATTCCT 59 NA Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 2 1 1 60 3L 3804764 3805840 CATTAAAGCTCCTGATCAGGT 57 3804724 3804744 GCTCTTCTCTTGTATCAAACG 57 NA DesignNoJunction Drosophila melanogaster 61 dro2 FBgn0052279 FBtr0073059 1 1 1 68 3L 3314416 3314434 GACAATTGTTGTCCTGGCC 59 3314466 3314484 CAGGGACCCTTGTATTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 3 2 2 170 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237507 3237525 CTCTTCGCAGATCTCCTCC 59 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 1 1 1 148 3L 3159214 3159290 TAAGAAGGCGGATAAGCCC 59 3159084 3159102 CAATAAGCACCTCCAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32487 FBgn0052487 FBtr0073007 1 1 1 93 3L 3016371 3016456 ATAGGAGACACCATGTGCA 58 3016296 3016316 CATCCTGATAGCTGTTAACCC 58 NA Drosophila melanogaster 61 CG1143 FBgn0035359 FBtr0072937 2 1 1 82 3L 2645452 2645638 GTTGCTAACCACCTTGCTG 59 2645682 2645702 GAAAGCCCGAGAAGATATCAC 58 NA Drosophila melanogaster 61 CG16985 FBgn0035355 FBtr0072929 2 1 1 161 3L 2599823 2599906 ATGTCGAAAGGATCCCATCC 59 2600030 2600048 CTTTCCATCGGACTTACGC 58 NA Drosophila melanogaster 61 CG5707 FBgn0026593 FBtr0072912 3 1 1 245 3L 2191940 2191958 CATCGAGACGCATGAACAG 59 2190184 2190202 ACGAAGTGGTAGGCAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13936 FBgn0035282 FBtr0300713 2 1 1 95 3L 1851492 1851678 CAAGAAGAACGTTCAGTTTCGT 59 1851352 1851370 TAGGAATTGAAGCCAGCGT 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 1 5 5 98 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743973 1743991 TTGAGCAGAACAGGATCCC 59 NA Drosophila melanogaster 61 CG7974 FBgn0035254 FBtr0072763 3 1 1 92 3L 1666027 1666102 CAATCGATTCAACATCGAGGA 58 1666156 1666174 GGATTCGTCTGATGCTGTG 58 NA Drosophila melanogaster 61 CG2277 FBgn0035204 FBtr0072729 2 1 1 60 3L 1306225 1306244 CGCAAATACTTCGATTTCGT 57 1306184 1306202 GCTGCATGGTAAAGAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysB FBgn0004425 FBtr0072628 3 1 1 172 3L 1207653 1207671 TCTCCTACAATGAGTGCGG 59 1207805 1207825 GAAATCGGTTTAGAAGCAGTC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Vti1 FBgn0260862 FBtr0072607 3 1 1 70 3L 692710 692729 AAATAACGGCCCATATTGGA 57 692595 692613 CTTGCTGCACAAATCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 2 4 4 80 3L 344411 344429 GGACATTCAGAACTTTGCG 57 344284 344369 CGTAGGAAGAAGGTGTAAGTC 57 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 1 2 2 107 3L 151927 151945 CAATGGTAGCGAAGAGCAC 59 151781 151860 CATAAAGTATCCCGTTCATCAGG 59 NA Drosophila melanogaster 61 snoRNA:MeU6-C68 FBgn0086021 FBtr0114297 3 1 1 60 2R 4053460 4053481 GTTGATGATTCTCCATCCTTGC 59 4053499 4053520 AACCAGGTTATCCTCTTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33371 FBgn0053371 FBtr0086363 1 1 1 60 2R 15647048 15647067 AAATTAAACATCTTCCGGCG 57 15647007 15647028 ATTCAGTAATCCCTAGTGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Yu FBgn0061188 FBtr0302365 2 1 1 63 2R 20385998 20386016 AAAGAATCCACAAGGTCCC 57 20386043 20386061 AATCGAGATGGCAATGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr FBgn0001325 FBtr0072449 3 1 1 134 2R 21114502 21114893 CAAACGCGAACCTTAGCTG 59 21114989 21115009 CATAGCTGGATAAATCGCAGC 59 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 3 1 2 100 2R 19954702 19954720 GCAAATCTTGATGGCCGAG 59 19953688 19953792 GATTATCCTCAATCTGGAGGGA 58 NA Drosophila melanogaster 61 alpha-catenin-related FBgn0029105 FBtr0072148 1 1 1 81 2R 19845735 19845868 CTGTTAACAATCAACGCTTTCG 59 19845910 19845928 AGCAGGTGACCTATGTTCC 59 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 1 4 4 80 2R 19801153 19801171 CAGCACAGTCTACTTGTCC 57 19801215 19801292 GACTGACCGAATTTGTCCC 58 NA Drosophila melanogaster 61 CG13560 FBgn0034899 FBtr0072088 3 1 1 68 2R 19635402 19635420 GTACGGGATCAACCACCTC 59 19635451 19635470 AAGGAGACGGATTAGTCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 egl FBgn0000562 FBtr0114586 3 1 1 105 2R 19623913 19623931 ATGGATCTGACAGAGGACG 58 19623764 19623845 CACTTTGATCTTTGCTGGGA 58 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 2 3 3 80 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619489 19619573 CATCGTTGTACAATCCGTCC 59 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 1 3 3 245 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596355 19596375 GAACATGGACTTGATCTTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 12 13 80 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566006 19566082 ATGTCGATGAAGCTCTCCC 59 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072031,FBtr0072030 1 2 2 86 2R 19273680 19273698 CTACTACTTCATTGCGGCC 58 19273541 19273559 CATGCCTTCTTGTTCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 1 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 2 2 2 176 2R 19246363 19246381 AAGATGTCGCAGATCGGAG 59 19246581 19246599 CTTAGGCTCCGTCTTGGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12782 FBgn0034838 FBtr0072048 1 1 1 99 2R 19152595 19152613 GAGAAAGGTGGGACTTCAC 57 19152458 19152532 GTCCCAGAACCTAATGGAC 57 NA Drosophila melanogaster 61 CG3092 FBgn0034835 FBtr0071999 2 1 1 60 2R 19121276 19121297 TTCTACAAGATCCTAACCTTCG 57 19121318 19121336 GCTGGTGTCTCTTGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 3 1 1 70 2R 18928884 18929133 TGAATGGACTTGGATCCGAC 59 18926510 18926528 AACTGGTTCAACCTGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32833 FBgn0052833 FBtr0071990 3 1 1 60 2R 18872565 18872583 CAAGGTGATCCGTGTACGA 59 18872523 18872541 TGCTACTTCGATGACTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12490 FBgn0034782 FBtr0302717 3 1 1 80 2R 18722644 18722721 ACTTTCCGGAATACGATTGGA 59 18722762 18722781 ATTGGGTCAAGATGTAGCCC 59 NA Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300124 3 1 2 70 2R 18671844 18671863 ATCCAGAATGCAGTTAGCCA 59 18671896 18671970 TTTCTACCGGTATCAGCGT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Obp58b FBgn0034768 FBtr0071871 1 1 1 82 2R 18592249 18592450 TATCACTGCGCTTGAATGG 58 18592496 18592514 ATGGTGGATGTTCTCCTCG 59 NA Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 2 1 1 60 2R 18547463 18547541 CTGACCTTGTATATCTGCTGC 58 18547559 18547581 AGTAGTTGATGAAGTAGGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3875 FBgn0034740 FBtr0071861 3 1 1 92 2R 18539339 18539506 TGAGTATAGCAAACCACCTCC 59 18539560 18539578 CGCGTACGATTCATGTCAG 59 NA Drosophila melanogaster 61 dnr1 FBgn0260866 FBtr0071837 3 1 1 232 2R 18454188 18479840 TGTCTGGAGAAGGTCTGTC 58 18453974 18453992 AAATTACGCACGCTCTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG3624 FBgn0034724 FBtr0071845 3 1 1 83 2R 18282171 18282191 AGATCAACAAGACCCTCAGTG 59 18282050 18282126 AGCTGTGCAAATTGCTTCC 59 NA Drosophila melanogaster 61 CG30398 FBgn0050398 FBtr0071710 2 1 1 60 2R 17605520 17605538 CAGACGGGTCACATTATGG 58 17605561 17605580 GGGACAATTTGAAGATGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17922 FBgn0034656 FBtr0071675 2 1 1 99 2R 17581648 17581728 CTTCTCCGCACTTTGTTCG 59 17581567 17581586 CCCTGGTAGTCACTATAGGC 58 NA Drosophila melanogaster 61 Tbp FBgn0003687 FBtr0071679 1 1 1 174 2R 17574321 17574339 AATCCTAAGCGATTTGCGG 58 17574101 17574183 GGAACTTTGCAGGGAAACC 59 NA Drosophila melanogaster 61 CG10306 FBgn0034654 FBtr0071670 3 1 1 61 2R 17572951 17573036 GCTACAACCCAGATCATCTG 58 17573058 17573078 GTTGTTCTTAGCCTGATCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 2 2 2 81 2R 17372489 17372573 GGTCAAGATTGTTAACATGAGC 58 17372614 17372633 GCTGCCCATATGATGTAGTC 58 NA Drosophila melanogaster 61 CG4038 FBgn0011824 FBtr0071639 1 1 1 281 2R 16984713 16984731 ATTTGGTAAACCTCGTGGC 58 16984116 16984135 TTGAAGTAGGGAACATCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 3 2 2 92 2R 16861135 16861426 TCTTTATGGCCGCTTTACC 57 16861061 16861079 GTGTCTCCGTAATCAGTCG 57 NA Drosophila melanogaster 61 CG15225 FBgn0034551 FBtr0071513 1 1 1 60 2R 16680484 16680504 AATCAGTTCAAAGCGAACACC 59 16680526 16680544 GGCACAGGAAGAGTACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33786 FBgn0061361 FBtr0091787 1 1 1 117 2R 16531175 16531194 GATTATCGAGGAGGACACCA 58 16531002 16531095 GTGATCCACCTCCTTGAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18067 FBgn0034512 FBtr0086216 2 1 1 61 2R 16422047 16422065 GAGCTTGGATTCTACTGGG 57 16422090 16422169 TATATTCGCAGCGCTAGAC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 1 2 2 80 2R 16391211 16391293 GTGGTCTCCATACAGAGTCTC 59 16391334 16391353 CTGGCTGATGTTATTGCTGG 59 NA Drosophila melanogaster 61 CG13872 FBgn0034477 FBtr0086341 2 1 1 84 2R 15768006 15768024 ATGCCCAGATGGCTTACTC 59 15767865 15767883 CAAATGTACCGACGTCCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0301882,FBtr0114605,FBtr0086543,FBtr0086544 1 6 6 80 2R 15319059 15319144 GTGAATATCGCAAGAGTATGCT 58 15319000 15319021 TCGAATCGACAACATCAAACAG 59 NA Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086640,FBtr0086639 1 2 3 60 2R 14664011 14664031 CCTCCTACGATGAGATGACTG 59 14663971 14663991 GACGAGTCAATGAAGATGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33998 FBgn0053998 FBtr0100053 1 1 1 69 2R 14626163 14626182 TCGTGACCAGAGAATTTGTG 58 14626275 14626295 TCCGTGATCACAATTTGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5327 FBgn0034363 FBtr0086707 1 1 1 86 2R 14503859 14503956 GCGTTAGGGATTGCAACAG 59 14504006 14504024 CAAACATGTGCTGGGATCG 59 NA Drosophila melanogaster 61 CG5721 FBgn0034315 FBtr0086771 1 1 1 100 2R 14071387 14071407 AAGAGACCATCAAGCAATTCG 59 14071252 14071270 TTCGTTGATGACAGGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5726 FBgn0034313 FBtr0086772 3 1 1 81 2R 14067023 14067043 CTGAACTCCAAGATCAAGACC 58 14066025 14066981 ACTCCATTGACTCACAAAGC 58 NA Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 3 2 2 80 2R 14055629 14055716 GCCAGAGCGTTTCAAATCC 59 14055758 14055778 TTAAGCTCCTTCTTCACTCCC 59 NA Nonspecific Drosophila melanogaster 61 CG30110 FBgn0050110 FBtr0086820 2 1 1 60 2R 13768088 13768110 CCGATGTACCATTCATGATTGAG 59 13768050 13768068 TACTGCTTCAACTGCTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30110 FBgn0050110 FBtr0086820 1 1 1 60 2R 13769533 13769551 CCTGTTTCGCATTCAACCA 59 13769491 13769509 AGTTTCTACCCTTGCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30323 FBgn0050323 FBtr0273321 1 1 1 60 2R 13741107 13741126 CTAAGGGTTGTCGTCTTCAC 58 13741146 13741167 GGTATATGTTCTTGGGAGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086797,FBtr0086795 2 2 5 146 2R 13738941 13738959 CCCTTCCTCACAGAACCAG 59 13745250 13745268 CTGGATGCCTTTAGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30103 FBgn0050103 FBtr0086929 1 1 1 80 2R 13381925 13381945 CATAAGACCGGATACCAAGGA 59 13381986 13382064 GTTTCCTTATTGATGGCGGG 59 NA Drosophila melanogaster 61 CG6522 FBgn0034223 FBtr0086954 3 1 1 100 2R 13354511 13354592 GCTTCTGGCAAGAATTCCAC 59 13354430 13354448 TCCTTTCCTGCACGATCTG 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 1 2 3 184 2R 12982552 12984740 TTGTTGAGGGAATTGCATTGAG 59 12982389 12982407 GTGTAGCTGTGCTTGATGG 58 NA InUTR Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0113379,FBtr0087112,FBtr0113381,FBtr0087113 2 5 5 80 2R 12566689 12566707 CTACTATCATCGCATCGGC 58 12566562 12566646 CACTTGAGATCGTTACGGAG 58 NA Drosophila melanogaster 61 CG8306 FBgn0034142 FBtr0087120 3 1 1 111 2R 12477569 12477650 AGGCCTATCTTGGTTCGTC 59 12477476 12477494 TCGATAGCGCCAATAGACG 59 NA Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 3 1 1 75 2R 12386523 12386707 CACGAGGAGTACAAGGACC 59 12386466 12386485 TCTGACGGTAGTATTCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)k07824 FBgn0022070 FBtr0087170 3 1 1 60 2R 12233633 12233651 AGAAGCGCTTCATGAACCT 59 12233591 12233611 TCAGATGAGTGATTGAACTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30099 FBgn0050099 FBtr0087180 3 1 1 60 2R 12176301 12176319 ATCCAAAGTGCCAAAGAGG 58 12176259 12176280 TGACATGTTATCCAAATCCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297,FBtr0087296 3 2 2 65 2R 11821706 11821725 GGTAACTTTCAAGGACTGGC 58 11821281 11821299 TAGAAACCTGCCTTTGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG33464 FBgn0053464 FBtr0087305 1 1 1 60 2R 11759725 11759743 GAGGACTCTGTCTACACGG 58 11759683 11759705 CAGCACTAGTTTCACCTTTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12964 FBgn0034022 FBtr0273307 2 1 1 108 2R 11377132 11377151 TATCTGTATCCCGAAGTGGC 59 11376846 11377064 GATATTGAGCAACTGCACTCTG 59 NA Drosophila melanogaster 61 Sfp51E FBgn0259966 FBtr0300323 1 1 1 124 2R 11080660 11080678 CTCACCTGGAGTTCATCGG 59 11080491 11080509 AGAATCCAGTACGTTCCGG 59 NA DesignNoJunction Drosophila melanogaster 61 pcs FBgn0033988 FBtr0301507 3 1 1 95 2R 10877278 10877296 CTAGACCCTACTACGAGGC 58 10877354 10877436 CATGGATTTCATTAGCTCGC 57 NA Drosophila melanogaster 61 CG12865 FBgn0033957 FBtr0087435 3 1 1 60 2R 10626464 10626482 GGTTGCCTTGTTATGGGAC 58 10626504 10626524 TCAGGAGACCAACTATTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sec61beta FBgn0010638 FBtr0087498 2 1 1 72 2R 10506667 10506750 TATCAAAGTTGGTCCCGTACC 59 10506784 10506802 AATGTGCAGCATGAAGACG 59 NA DesignRelaxed Drosophila melanogaster 61 Obp50e FBgn0033931 FBtr0087556 1 1 1 87 2R 10262496 10262573 GCTCATCTGTGCTATCCTG 57 10262427 10262448 AGTACTGCTTAACTCTGTTCAC 58 NA Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0290253 1 1 3 86 2R 10220418 10236910 ATCAGAAGATCGAATTCCAAGG 58 10236957 10236975 GTATATGCCATGGTCGGGA 59 NA Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087565 1 1 2 163 2R 10157671 10158057 GCACAAGCAAACCTATAAAGC 58 10157528 10157546 TTTAGATCTGCGAAGCGTG 58 NA InUTR Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 2 3 3 158 2R 10116658 10116676 CTTCGGTATCTGCATTGCC 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699,FBtr0087700 1 2 2 88 2R 9379392 9381771 CCCTGATATTAATCTGTTATAGCCC 58 9379328 9379347 GTAGATGAACAAACCCAGCG 59 NA Drosophila melanogaster 61 CG4627 FBgn0033808 FBtr0087738 2 1 1 178 2R 9102395 9102481 AAATCAATGCAATGCTGGAG 57 9102622 9102640 CATACTATAGACGGTGCGC 58 NA InUTR Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644,FBtr0302645 3 2 2 88 2R 8636959 8637040 AGCAGAAGATTGTCTACTCCG 59 8637088 8637108 ATTCGAACGGATGTTAACCAG 58 NA Drosophila melanogaster 61 CG17760 FBgn0033756 FBtr0110824 3 1 1 81 2R 8514602 8514620 TTCATGGCCATACAGTCGA 58 8514664 8514751 CGGCAAGTTTACTATGCTCC 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087832,FBtr0087830,FBtr0087836,FBtr0087835 1 8 8 112 2R 8503907 8504050 CTGCTACTACTGGGCACTG 59 8504126 8504144 ACCAGCTTGATGTACCCAC 59 NA Drosophila melanogaster 61 Amph FBgn0027356 FBtr0087828 1 1 1 80 2R 8495154 8495172 TTTCTGGTCACCAACTTGC 58 8495213 8495435 CAGTTCCGAGTAAATCTTAGCC 59 NA Drosophila melanogaster 61 CG8545 FBgn0033741 FBtr0087934 2 1 1 107 2R 8356345 8356425 CAATCGTTTGCTCCCATGG 59 8356495 8356514 CTGTAGTTTGGCCTTCTGGA 59 NA Drosophila melanogaster 61 CG33626 FBgn0053626 FBtr0290008 2 1 1 84 2R 8297614 8297694 TATACCGAAGCCAAGAGGC 59 8297740 8297760 TTTGGCATGTCATCTGATCAG 58 NA Drosophila melanogaster 61 Cpr49Ad FBgn0033726 FBtr0087955 2 1 1 80 2R 8279076 8279157 GTCTTTGAAGCTGTTCTCCTG 59 8279016 8279037 TAGGGATTGTATTGAGGCTGTC 59 NA Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 2 2 2 89 2R 8034897 8034916 ATGAAGAGGAGAACCAGGAG 58 8034689 8034845 TATCCGATTCATCCTCGCC 59 NA Drosophila melanogaster 61 CG13196 FBgn0033645 FBtr0088084 1 1 1 80 2R 7573609 7573630 CTCTGAGTCAGCACTATCTACC 59 7573434 7573569 GATAAGACTCCTCGCTTGGT 59 NA Drosophila melanogaster 61 CG30025 FBgn0050025 FBtr0088158 1 1 1 60 2R 7241550 7241568 GTCCTCCTTCAAGAACCAC 57 7241508 7241526 GATGGCAATGTCGTTGACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Ec FBgn0033600 FBtr0088189 2 1 1 110 2R 7147199 7147344 ATGTGCAAGATCCTTCCTC 57 7147107 7147125 GATGATCTCGGACTTCAGG 57 NA InUTR Drosophila melanogaster 61 CG12340 FBgn0027499 FBtr0088253 2 1 1 80 2R 6689155 6689752 CAGTTCCTACTACCTCGACC 59 6689094 6689112 TTTAGTTGTGCACTTCGGC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088416,FBtr0088419,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 10 10 83 2R 5991901 5992226 GAGCAGTCAGAACGTTACG 58 5992271 5992291 TCTTTCCTCATTTGAGAGCTC 57 NA Drosophila melanogaster 61 CG12920 FBgn0033481 FBtr0088404 2 1 1 87 2R 5957561 5957641 CCTTGATCATCCTCCTTCGT 59 5957691 5957709 AGGAGCATCATAGTGCTCC 59 NA Drosophila melanogaster 61 tsu FBgn0033378 FBtr0088567 1 1 1 109 2R 4998418 4998436 CATTGACAATGCGGAGGAG 59 4998598 4998616 TACTGTCGCTTCCAAATCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8078 FBgn0033375 FBtr0088631 2 1 1 176 2R 4985781 4985799 AGGCAGAGATCCATCACAC 59 4985571 4985589 TGATGCCTTCGTCTATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG30355 FBgn0050355 FBtr0088726 3 1 1 95 2R 4566937 4567013 CAGTACTGACATGAGATGGC 58 4566861 4566881 TCATCTCTTTCGGTTGATCTG 57 NA Drosophila melanogaster 61 CG12126 FBgn0033280 FBtr0088801 3 1 1 60 2R 4150522 4150542 CCGAATCAAGAAGTCTCATCC 58 4150482 4150500 TTCGATTCTTCTCCGAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp44a FBgn0033268 FBtr0088816 1 1 1 140 2R 4022487 4022505 TGTTGCTATTCTGCTGTGC 58 4022295 4022313 TTGTACTTGGCGATCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11165 FBgn0033238 FBtr0088853 2 1 1 60 2R 3837423 3837442 CCTGATCCTTGACACTTTCC 58 3837465 3837483 TTTAGATGTTATGGCGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30385 FBgn0050385 FBtr0089047 2 1 1 60 2R 3070363 3070381 GCATTCTCCGTTCAAAGCC 59 3070404 3070423 CAAATCAATCCGTGCAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0301713 3 1 3 81 2R 2880551 2880632 GCTCCAAGTGGTAAATTATCCA 58 2880670 2880692 CTCCAGGAAGTTACATAAGTCCT 59 NA InUTR Drosophila melanogaster 61 CG33919 FBgn0053919 FBtr0091923 1 1 1 80 2R 2511869 2511889 ATCAATTGGAATCTGGCAGTG 59 2511753 2511830 AACTTGCATTCGGATAATTGGG 59 NA Drosophila melanogaster 61 CG14590 FBgn0033061 FBtr0086022 2 1 1 92 2R 1967765 1967783 GTAGGCTGTTACACTCCGT 59 1967636 1967654 CATTGACTCGTGCTTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11665 FBgn0033028 FBtr0086072 2 1 1 98 2R 1531218 1531334 TATAGTTCATTGGGCCCGG 59 1531138 1531157 TATCATACCCAGTGACGCAG 59 NA Drosophila melanogaster 61 CR12628 FBgn0042701 FBtr0085952 3 1 1 60 2L 22226289 22226310 GGATCAATATGCTGTTGATGAG 57 22226330 22226349 AAGGTCTTCGTCTTGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 1 2 2 101 2L 22168194 22168212 ATGCCTCTCAATCAGGGTG 59 22168058 22168131 TATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 CG3651 FBgn0032974 FBtr0085937 2 1 1 88 2L 22122172 22122262 GGTGATAAGGTGGAAAGTCCT 59 22122312 22122330 TCAAAGGATGAGAGGGCAG 59 NA Drosophila melanogaster 61 CG6675 FBgn0032973 FBtr0299905 2 1 1 80 2L 22109150 22109230 TGGCTACAATAGGCATACCC 59 22109271 22109291 GTAGAGCATTCATGAACTCCC 58 NA Drosophila melanogaster 61 CG10834 FBgn0032972 FBtr0085943 3 1 1 66 2L 22107028 22107046 CTGGTGACAATACGTCTGC 58 22106980 22106998 TGATGTAGTTCTCGGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999,FBtr0085908 3 2 2 68 2L 21773019 21773039 AATATCAGTGTGGGACATGTG 58 21766132 21766155 GGCTAATCTCATGAAGTTTAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173,FBtr0085925 2 2 2 107 2L 21589053 21589071 TCTGCTCATCAAAGGTTCG 57 21587406 21588985 CTTCATTTGTGGGTTTACATCC 58 NA Drosophila melanogaster 61 CG8665 FBgn0032945 FBtr0081517 1 1 1 111 2L 21376167 21376185 TGATATGGACAAAGCCGTC 57 21376676 21376694 AAATTCGTCGTGTATCCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602,FBtr0081483,FBtr0081484 2 3 3 81 2L 21281323 21281399 AGGAATCCGCAGAAACCTC 59 21281443 21281462 GATTTAACCTCATGTCCGCC 59 NA Drosophila melanogaster 61 CG14400 FBgn0032896 FBtr0081449 2 1 1 60 2L 20857331 20857349 GTCCTATGCTGCAATGGTC 58 20857289 20857309 TTCACCACTCTTATATCGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10268 FBgn0032811 FBtr0081266 2 1 1 60 2L 19580067 19580087 AGGATTACATATCCGAGAGGC 59 19579924 19579942 ATTCGAACGATACACGACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18094 FBgn0032791 FBtr0081243 1 1 1 80 2L 19490501 19490521 GGAACTTATAGACCTTCGGCT 59 19490557 19490642 CAACAATAATCTGTAGTCGTAGTCC 59 NA Drosophila melanogaster 61 Hs2st FBgn0024230 FBtr0081288 1 1 1 83 2L 19444549 19444567 TGATCCTGATAGCCCTGTG 58 19444419 19444502 GCTTGAAGGCATGTTCCAG 59 NA Drosophila melanogaster 61 CG33120 FBgn0053120 FBtr0081118 2 1 1 94 2L 18844480 18844501 GGTGTACATACTATAGTGCAGC 58 18844338 18844425 TCCTGCCAGAAACTTTCCA 59 NA InUTR Drosophila melanogaster 61 ScpX FBgn0015808 FBtr0081109 2 1 1 201 2L 18832286 18832369 GTCAATAATCCCTACTCGCA 57 18832532 18832551 TCTCCATGCCTACAATTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10211 FBgn0032685 FBtr0081069 3 1 1 85 2L 18528765 18528847 CTGGAGGACAATTATCTGAATTCC 59 18528890 18528909 TCTTCAGGGTTTACTTGCCA 59 NA Drosophila melanogaster 61 CG10211 FBgn0032685 FBtr0081069 1 1 1 82 2L 18528765 18528847 CTGGAGGACAATTATCTGAATTCC 59 18528888 18528906 TCAGGGTTTACTTGCCAGG 59 NA Drosophila melanogaster 61 CG10176 FBgn0032682 FBtr0300674 3 1 1 106 2L 18486107 18486125 GCTATGTTGCAACGGAGAG 59 18486192 18486636 TGTCTTGTAAGCTGAACATTCC 59 NA Drosophila melanogaster 61 CG31786 FBgn0051786 FBtr0300069 1 1 1 91 2L 18210621 18210639 CATAACAAGTCAGCGGAGC 59 18210140 18210566 AGGAACCTACTGAAGTGGC 59 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 1 3 3 80 2L 18127999 18128020 GCAATCAGGTGTTCATTATCTC 57 18128061 18128143 TATCCTTGTGCATCTGGTG 57 NA Drosophila melanogaster 61 CG34106 FBgn0083942 FBtr0110785 1 1 1 60 2L 17171648 17171667 TACGGCAACGATTACTACGA 59 17171688 17171708 CTCTGTGTTCTTCCTTCAGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyt-b5-r FBgn0000406 FBtr0080932 2 1 1 80 2L 16789889 16790229 AGAAGAGTGATCTCATTCACCT 58 16789830 16789849 AAAGGCTGTTGTATTTGGCA 58 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 2 1 1 79 2L 16730216 16730292 CTTATCTACAAGCAAAGTCCTCG 59 16730330 16730349 TAGTGATCCGTATCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 2 4 4 89 2L 16696753 16697510 CTATGTTTAGGTGCAAGGGC 59 16697562 16697580 ATGCCTTCTGTAGCACCTC 59 NA Drosophila melanogaster 61 CG5888 FBgn0028523 FBtr0080880 1 1 1 160 2L 16404619 16404637 CTACTGCAAGCGAGATGAG 58 16400518 16404495 CAACGGGATATTCCTTGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 2 3 3 83 2L 15958577 15958710 GACTCGAGCATATGTCTGGA 59 15958755 15958774 TTTGTAGCAAGCATTAGCGT 58 NA Drosophila melanogaster 61 CG31824 FBgn0051824 FBtr0080789 1 1 1 101 2L 15886712 15886730 CTGTCAACTGATGCAACCC 59 15886793 15887913 TGCTTGTATCTTTCCCAAGTG 58 NA Drosophila melanogaster 61 CG11865 FBgn0028947 FBtr0080753 2 1 1 61 2L 15617184 15617202 GGTCTACAGTTATGCCGGA 59 15617294 15617315 CCATTGCACTTTCAATACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18482 FBgn0028891 FBtr0080741 3 1 1 83 2L 15403665 15403683 TGTCAAACGAGCAAATTGC 57 15402377 15403621 GTTGCTAACAGGTAGTAAACAG 57 NA Drosophila melanogaster 61 l(2)35Cc FBgn0259982 FBtr0080708 3 1 1 143 2L 15256676 15256694 CAGAAGCTCACAGACAAGC 58 15256851 15256870 CGTACTCCATGATCTCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080588 3 1 2 100 2L 13980262 13980621 TCAAACAAGCTCACGAGTG 58 13980682 13980703 ACTTACATAACCCTTTCCACAC 58 NA Drosophila melanogaster 61 He FBgn0028430 FBtr0080616 3 1 1 101 2L 13972600 13972798 CAATACATAGCAACCGTCCA 58 13972518 13972536 TGGATTCCGTTTCACTTGG 58 NA Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080577,FBtr0080576 3 2 2 82 2L 13775519 13775537 CACGTCATCACAAACGTGG 59 13775391 13775474 CAAGGATTCCAGATGACCGT 59 NA Drosophila melanogaster 61 CG31813 FBgn0051813 FBtr0080531 1 1 1 82 2L 13736327 13736345 CAACAAGGAAGACTCCGAG 57 13736391 13736409 CCTCCAGTCTGTCATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 1 1 1 69 2L 13436779 13437925 TGACTAACTTGTCGAGCAC 57 13437958 13437976 GAGTTCTTGTTCAGACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 RpL24 FBgn0032518 FBtr0080524 2 1 1 216 2L 13394796 13394879 AAGATCGATGGCAAGTCGT 59 13394598 13394616 TACGCTTGGCCAGAATCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5705 FBgn0032486 FBtr0080444 2 1 1 60 2L 13220306 13220325 GTACTAGAACGGCACATCAC 59 13220347 13220366 GCATATCCTCGTCCTTCTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15485 FBgn0032442 FBtr0080412 2 1 1 60 2L 12668138 12668162 CATTAAGGACACGTTCTATGATCTC 59 12668102 12668122 ACGAGTATCTTCATCCAACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899,FBtr0089898 3 2 2 80 2L 12432198 12432320 TGGGAGTGCGAGATATGAC 59 12432136 12432154 CAGCATGACACAGATGGAG 58 NA InUTR Drosophila melanogaster 61 zuc FBgn0261266 FBtr0080316 1 1 1 60 2L 11989412 11989430 TTATCCGGATCATCAGCGA 58 11989370 11989390 AGCATACTGATCTGAGAACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14937 FBgn0032377 FBtr0080264 1 1 1 95 2L 11793936 11794033 CGATACAGAACCCACTGCA 59 11793859 11793877 ATCTGGAACTGCTGGTACG 59 NA Drosophila melanogaster 61 hgo FBgn0040211 FBtr0080201 2 1 1 89 2L 11137621 11137639 GTCCCATTGGTGCTAATGG 58 11137691 11137775 CCTGGAAGTCCTTTACATCC 57 NA Drosophila melanogaster 61 SCAR FBgn0041781 FBtr0080148 3 1 1 80 2L 10978638 10978656 CATTGATGCCCAACAACGT 59 10978697 10980456 ACACTCCCATATTTCCGTATCC 59 NA Drosophila melanogaster 61 CG7309 FBgn0032314 FBtr0301184 2 1 1 80 2L 10908540 10908610 CTCCAGTACTGATTTGCCG 58 10908478 10908500 CTCCTCTGGCCATTAAATTTAGG 59 NA Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 3 2 2 116 2L 10843819 10843840 GTTCACCAACAATGATCTTCTC 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 3 3 3 175 2L 10774660 10774752 CGACAATTGTCCAATTCTCG 57 10774504 10774524 CTTTGTTGTCATCGGTTATGC 58 NA Drosophila melanogaster 61 CG6729 FBgn0032296 FBtr0080119 3 1 1 71 2L 10742604 10742622 AAGAACTTCGACGAGAGCT 58 10742499 10742517 CTTCTTTAGGCCCAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17104 FBgn0040496 FBtr0080105 3 1 1 80 2L 10678790 10678909 ATTGAGGAAACTACAGAACTGC 58 10678949 10678968 TGTTTCAGTGGTCTCCTCAG 59 NA Drosophila melanogaster 61 CG5198 FBgn0032250 FBtr0080026 3 1 1 83 2L 10436116 10436137 CAGAAAGTGAAAGAGGAATCCT 58 10436179 10436258 GAGGTATTCCCTTTCGTAGTC 57 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 1 2 2 83 2L 10365673 10365783 GCATTCAGATTCATGCTGGAG 59 10365828 10365846 GTGAAGCAGTTGGAACACG 59 NA Drosophila melanogaster 61 CG31873 FBgn0260750 FBtr0079986 3 1 1 82 2L 10270148 10270166 AAGAAATGCACGTTCGGAG 58 10270209 10270291 CGCATATGTTGTTCAATCTCGA 59 NA Drosophila melanogaster 61 chico FBgn0024248 FBtr0080088 2 1 1 80 2L 10244844 10244920 CCATAACTATGGTTTCGGCAG 59 10244784 10244802 GTTTGATTGCTGGACTCGC 59 NA Drosophila melanogaster 61 CG34183 FBgn0085212 FBtr0112376 1 1 1 178 2L 9890644 9890721 AGCAGTTGAGACAACAACTG 58 9890427 9890446 GTTTATTTCCCGCTCATCCA 58 NA Drosophila melanogaster 61 CG13123 FBgn0032150 FBtr0079917 1 1 1 87 2L 9792936 9792954 ATATACGGGAGCACAGGAG 58 9792814 9792886 TTAAGTGCTATGTTCCAGCC 58 NA Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 1 2 2 80 2L 9059738 9059758 CCCAGACCCATTATCAAATGG 58 9059586 9059698 CTCCCATTCGTTCACTATGTG 58 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 1 2 2 177 2L 8992353 8992374 CACCATCTACTTCATAAAGCCT 58 8992782 8992858 CTGGCATGGAAGGATAAAGG 58 NA InUTR Drosophila melanogaster 61 CG18662 FBgn0040963 FBtr0079760 3 1 1 82 2L 8981012 8981093 GTACCATCTTGATGTATACGATGAG 59 8981133 8981151 AGTAACCACCTCCAAGACC 59 NA Drosophila melanogaster 61 CG9465 FBgn0032067 FBtr0079743 3 1 1 96 2L 8770474 8770494 TCAGAGGTCAAACATTCATCG 58 8770335 8770419 CCATCACTAGTTTAACAACCGA 58 NA Drosophila melanogaster 61 fu2 FBgn0029173 FBtr0079674 2 1 1 121 2L 8464665 8464683 TGTGCCACCATAATACGGA 58 8464768 8464844 GTTGCGATCGTACTGAACG 59 NA Drosophila melanogaster 61 D12 FBgn0027490 FBtr0079707 2 1 1 67 2L 8436307 8436326 GGCAAAGATCTACCTGAACC 58 8436202 8436220 TATGACGGATGGAGGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 2 2 2 107 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026629 8026647 CCTTGGACGTGAATTTGGC 59 NA Drosophila melanogaster 61 CG33296 FBgn0053296 FBtr0302519 1 1 1 80 2L 7715792 7715870 TATCCAACACTTTGTCATCCGA 59 7715733 7715751 ATAAAGACGCGATGGTGCT 59 NA Drosophila melanogaster 61 CG7025 FBgn0031930 FBtr0079515 3 1 1 80 2L 7692364 7692385 CGAACTTGAGACTGAAATTCAG 57 7692246 7692323 TCCGAATCGATGAGTTCCT 58 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 3 4 4 80 2L 7649008 7649026 GAGGACTTAGTCCTTTGCG 58 7648878 7648967 CGGCTTAATTGTACTGAAACAG 58 NA Drosophila melanogaster 61 Gr28a FBgn0041247 FBtr0079463 1 1 1 90 2L 7453312 7453549 GTTAAACGAAATCCTGCAGGA 59 7453242 7453260 GTGATTGACAACCGAGTGC 59 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 3 2 2 96 2L 7388044 7388062 CAATTCGGAAGAGCTACGC 59 7386640 7387986 CCAAGTTTCCACCAATCTGTC 59 NA Drosophila melanogaster 61 CG4497 FBgn0031895 FBtr0079418 3 1 1 85 2L 7192047 7192507 AGATATTCACGGAAAGTCGC 58 7191981 7191999 GTCAAAGGTTCCGGAATCG 58 NA Drosophila melanogaster 61 CG13775 FBgn0031874 FBtr0079363 1 1 1 80 2L 6956213 6956632 GAATTGAATCTGCACGAAACAG 58 6956154 6956172 CAACTTCTCATCACAGCGT 58 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262,FBtr0113411 2 2 2 124 2L 6491593 6491688 GAGAAGTGGAGTAAGGTCCG 59 6491775 6491793 TCGAGATCGTTCTTCTCCC 58 NA Drosophila melanogaster 61 CG42368 FBgn0259714 FBtr0299967 1 1 1 80 2L 6391336 6394846 ATCCTATAAGGTCGCGTGG 59 6391274 6391294 CTTGGATTACGCGTTATCACG 59 NA Drosophila melanogaster 61 CG9486 FBgn0031791 FBtr0079243 3 1 1 60 2L 6256175 6256197 GGACAAGATACACAAGTTTCTGG 59 6256214 6256235 GTAGTGCTTGAAGATATTGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079208,FBtr0079207 3 2 2 113 2L 6154021 6154658 GAAATTTAATACCAGCTCGGAC 57 6153929 6153947 ATTTCCATCTGCCTTTCCC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG34179 FBgn0085208 FBtr0112372,FBtr0299809 1 2 2 60 2L 6048187 6048208 GAGGTAATACACAACTTTCGGG 59 6048148 6048166 GCCGTTTATCCAATCGCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 1 2 2 99 2L 6033999 6034020 ACGGAATGGATTATATGGTGTC 58 6033866 6033939 AGAAAGCTAGCTCCCTTGG 59 NA Drosophila melanogaster 61 sip1 FBgn0024191 FBtr0079134 2 1 1 86 2L 5721168 5721186 AACGGACTACGATCTGGAC 58 5721235 5721305 GCCCAAATACCGTAGATCTG 58 NA Drosophila melanogaster 61 CG14010 FBgn0031725 FBtr0079116 1 1 1 81 2L 5606156 5608798 AGAGGAGGTTATGAGCATCG 59 5606094 5606112 TATGCACAAGTAGGCTCCC 59 NA Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0077453 1 1 2 165 2L 4456511 4456734 GCAGATTACGTTTAGGAAACG 57 4456313 4456331 AGTATAAAGGCGTTCGGTG 57 NA InUTR Drosophila melanogaster 61 Mad FBgn0011648 FBtr0077616 1 1 1 98 2L 3148117 3148135 TCCTTCCAACAACTCGGAC 59 3147816 3148056 ACACCCTTGCCTATATGACG 59 NA Drosophila melanogaster 61 PpD6 FBgn0005779 FBtr0077660 1 1 1 60 2L 3110499 3110517 GAACGACTTCGATCTGGTG 58 3110539 3110559 AAAGAACTCGTATCCATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 2 2 2 80 2L 3067256 3067275 AAGACGAATGTGACCTTGGT 59 3067318 3067397 TGTGCAGACCTCCTTAAGG 59 NA Drosophila melanogaster 61 CG3605 FBgn0031493 FBtr0077669 1 1 1 80 2L 3027271 3027347 GACCTTGATAATGGCGTAGAC 58 3027211 3027231 GGATGATTCTTCTGACTCCGA 59 NA Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 1 2 2 82 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025879 3025899 GAGTCGTTCTGAAGTAGAGCT 59 NA Drosophila melanogaster 61 CG15399 FBgn0031460 FBtr0077730 3 1 1 144 2L 2771684 2771702 GTTCGCATCCTGATGTTGG 59 2771489 2771507 AATACTCATGCAACCGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Trn-SR FBgn0031456 FBtr0077715 3 1 1 80 2L 2760079 2760097 TCTTCCAAGGCAACAATCC 58 2760138 2760229 TCCAAGAATAGATCGACTTCTG 57 NA Drosophila melanogaster 61 Gr23a FBgn0041248 FBtr0273435,FBtr0077702 2 2 2 160 2L 2671874 2671895 GGTTGTCTAATTTCGAAGTTGG 58 2672014 2672089 ACAGCTGCAAACATACTACTC 58 NA Drosophila melanogaster 61 eys FBgn0031414 FBtr0114370 1 1 1 80 2L 2353455 2353548 ACCTTTACTTGCATCTGCC 58 2353591 2353610 GTTGTTGAAGGAGTCACAGG 58 NA Drosophila melanogaster 61 CG11723 FBgn0031391 FBtr0077852 3 1 1 86 2L 2146804 2146894 AGCAGGATGTCTCGATCTG 59 2146736 2146756 TTCGTTTCTGCTGTATCTTGC 59 NA Drosophila melanogaster 61 Or22c FBgn0026396 FBtr0077826 2 1 1 81 2L 2055041 2055059 ACCGCTGATTATGGGTCTC 59 2055100 2055336 CGAGGGCAGTATGATATTAAAGG 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 2 5 6 196 2L 1726645 1727654 AAGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077914,FBtr0077915 3 2 2 240 2L 1614010 1614028 CTCTCCACGGGATTGAAGG 59 1613229 1613247 TCATCGATCCGATGAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 3 1 2 242 2L 1344514 1344588 AACCTTTGCGCAGATAAACAG 59 1344792 1344810 ATAGGATCCGAAGTTGCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973,FBtr0071433 1 2 2 67 X 10047936 10047954 ATCGATCATCGTGCAATGC 59 10048442 10048461 AGCCATTCCATAGATACGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071262 2 1 2 102 X 8873858 8942458 GAGAAGGAATGGTGTGCAC 58 8873774 8873793 AGTTGACGGAATTAGCACTG 58 NA InUTR Drosophila melanogaster 61 Cht11 FBgn0029913 FBtr0071041 1 1 1 95 X 6742651 6742671 CAATTACACGGTTCAGTGGTG 59 6742511 6742597 TTAACCAACGTAAATGAGTGGC 59 NA Drosophila melanogaster 61 CG41518 FBgn0085663 FBtr0302253 3 1 1 60 U 2334204 2334222 AGAACACCGTTAACCTGGA 58 2334162 2334182 TCAAATGCTCCCTTTGATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trp FBgn0003861 FBtr0085513 3 1 1 81 3R 25745690 25745709 AGTACATCCTCAGCGATGTG 59 25745570 25745647 TCGAGGATCTTCTTGACACC 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0301866 3 1 3 171 3R 18289685 18289703 CTCAACTACTCCGACCACG 59 18289837 18289905 TTGCTGGAACAATAGATGCG 59 NA InUTR Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300071,FBtr0300072 3 2 2 80 3R 8869509 8869528 ACACTATCGCTACTACCTGG 58 8869571 8869658 ACACGCGTATAAACACCTG 58 NA Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082079 1 1 2 185 3R 5458015 5458111 TCTTTCAGCGAAACCTATGGA 59 5458258 5458276 TGGATGCTTTACCACCTCG 59 NA InUTR Drosophila melanogaster 61 corto FBgn0010313 FBtr0078844 1 1 1 166 3R 911308 911326 AGAAGGACTACAGCATCCC 58 911160 911178 CATGTTGTTCACGAACGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089579 2 1 2 112 3L 21827827 21827845 CAATGAGAAGACCGCTCAG 58 21827919 21828180 AGTCATTCTTCTGTTGCTCTC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 1 12 12 142 3L 19311991 19312010 TTCTTCCTGTTCATGCACAC 58 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 CG11342 FBgn0035537 FBtr0073338 2 1 1 60 3L 4367108 4367126 AGCGAGGAGAATGAATCCC 59 4367066 4367084 CATCATCGAGGACATCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl14 FBgn0052476 FBtr0072501 1 1 1 81 3L 248608 248680 AATCCGTGCAACAGTTCTC 59 248722 248743 CGATGATTAATAACGAACCGTC 58 NA Drosophila melanogaster 61 CG3500 FBgn0034849 FBtr0072038 2 1 1 144 2R 19244488 19244506 GCATCATGAGTGGATTCCC 58 19244177 19244381 GTAAAGTAAGCCAGCACCTG 59 NA Drosophila melanogaster 61 CG9294 FBgn0034666 FBtr0071720 3 1 1 80 2R 17749072 17749147 CGATACCTTAAGGGAAGTGGA 59 17749188 17749207 ATTTGTCCAGGCCTATACGT 58 NA Drosophila melanogaster 61 CG7744 FBgn0034447 FBtr0086535 2 1 1 80 2R 15341690 15341764 GTGGAATATCCTTTATACTGGTGG 58 15341802 15341821 CTTGGCTCAACAGATTGGTC 59 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414,FBtr0087413 2 2 2 80 2R 10925146 10925291 ACCGTGAATGTGCTTTATCC 58 10925333 10925352 AATCGATCCCGAGATAAGGA 57 NA Drosophila melanogaster 61 BubR1 FBgn0025458 FBtr0086032 1 1 1 80 2R 1857715 1857733 AACGGCCCACTAACTACTG 59 1857491 1857673 AGGATGGAATCATTTGCTCAC 58 NA Drosophila melanogaster 61 CG4580 FBgn0032585 FBtr0080865 1 1 1 181 2L 16489424 16489444 CAGTACTACCAAGACTTGCAG 58 16489587 16489658 AAGAATGGCTGAGGTGGAG 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 1 4 4 117 2L 12352776 12358051 CCAAATCGCAACCAAAGTC 57 12358129 12358150 CCACGAACATCTTGATATTGTC 57 NA Drosophila melanogaster 61 CG14930 FBgn0032366 FBtr0080245 1 1 1 92 2L 11521179 11521199 GAGTTCGTAGATGGTATGCTG 58 11521045 11521126 CCTTGCCAAAGTATAAGCCA 58 NA Drosophila melanogaster 61 cmet FBgn0040232 FBtr0080215 1 1 1 80 2L 11262289 11262307 GCTTGAGACGGAAATAGCC 58 11262164 11262248 TCAAAGGTAATCGATTTCCTCG 58 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 1 2 2 81 2L 10339551 10339572 GAGAAACTCCTTGAGATTTGGT 58 10339613 10340165 TTTCCCAATCAGATCTGCTG 58 NA Drosophila melanogaster 61 Gr22c FBgn0045499 FBtr0077899 3 1 1 109 2L 1790757 1790832 AGAGAAGTGTGAACGAATTCG 58 1790668 1790688 GGTGATGATCATCTGGAAACC 58 NA Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 3 2 2 98 2L 1152248 1152266 TATCTGTCCAAGGACTCGC 58 1152107 1152186 CAACTCGGTATAATCGCCG 58 NA Drosophila melanogaster 61 CG11376 FBgn0031216 FBtr0078103 1 1 1 80 2L 97767 97787 CAATTAAGCGAATCGTACACC 57 97828 97897 ATCTATGGACAGCTCTTTGC 57 NA Drosophila melanogaster 61 CG3386 FBgn0035152 FBtr0072611 1 1 1 126 3L 681442 681460 ATTTCTCCTCACCCAGGAG 58 681272 681290 TTCCGTGTTGAGATCTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34455 FBgn0085484 FBtr0112761 3 1 1 60 3L 9353834 9353853 GCTATGTGGGAAACAAGGTG 59 9353947 9353965 GGATCCACATCGAAACCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt37a1 FBgn0026756 FBtr0081372 1 1 1 87 2L 20373436 20373454 ATCGACCAACGAAATCGTC 58 20373315 20373335 ATGTATTCCTTAGGATGTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17260 FBgn0031498 FBtr0077653 3 1 1 60 2L 3038304 3038324 TCCCATATGTGATAGTACCGT 57 3038343 3038364 ATTGTCATCCGTTTCTATGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6762 FBgn0030876 FBtr0074492 2 1 1 192 X 17751676 17752096 CCATTAAGAACGAAACCAGC 57 17752249 17752269 CCCATGTAGTGATACAGATCG 57 NA Drosophila melanogaster 61 CG9518 FBgn0030590 FBtr0073983 3 1 1 188 X 14760500 14765033 CTAAGAATCGCAATTGGCCT 58 14760331 14760352 GCTTCTTTGAACAAGAATTCCG 58 NA InUTR Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0112956,FBtr0070964,FBtr0070966 2 6 6 80 X 6700187 6700206 TGACGGACCTTAAGTTCTCC 59 6700249 6700666 TGTGCCAGATCTTGACCAG 59 NA Drosophila melanogaster 61 CG4194 FBgn0025627 FBtr0070328 1 1 1 61 X 1962671 1962690 GTTTGCTTATGATCCTGGGA 57 1962714 1962732 CAGTTCCTGAGGATTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0300911,FBtr0078674,FBtr0300906,FBtr0078675,FBtr0300910,FBtr0300907,FBtr0078672 2 8 12 163 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1586611 1586629 TTAGGGATCGGTGAAGACG 58 NA Drosophila melanogaster 61 CG7083 FBgn0035877 FBtr0076604 2 1 1 60 3L 8334150 8334168 ATATTCGCAACGCGAACTG 59 8334254 8334273 CACGATCTCCAGATCTAGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083860 1 1 3 83 3R 15689905 15690007 TCGTGAGCAGTCGAATCAG 59 15689840 15689858 ATTGCGACTATAGTCGCGA 59 NA InUTR Drosophila melanogaster 61 CG18476 FBgn0037931 FBtr0082443 2 1 1 90 3R 7503526 7503614 AAATCAATCTGGATGCAACTGG 59 7503457 7503475 ACATAGCAATAGGCACCCA 58 NA Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111189 1 1 2 109 X 22363680 22363698 GAACTCAACATGTACCCGG 58 22363286 22363607 GGACTAATGCTCGTGACCT 59 NA Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 1 1 1 80 X 21027661 21028075 AACGATTAACGCTCCTCTG 57 21027599 21027617 TAGTAGGCTCCATTGTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 mal FBgn0002641 FBtr0077306 3 1 1 181 X 20302545 20302626 GATTTCCAGACACGTCTTTGG 59 20302769 20302787 CGAATCCCACAAACGAACC 59 NA Drosophila melanogaster 61 CG7326 FBgn0030970 FBtr0074653 2 1 1 60 X 18757174 18757194 CCAACCAATTAGCTTAGTGCC 59 18757134 18757152 GACCACATAGTTGAGGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7322 FBgn0030968 FBtr0074654 2 1 1 114 X 18750459 18751112 GATTTCGACACCCACTTCG 59 18750363 18750381 ATGACGCTATCGAGGACAC 59 NA Drosophila melanogaster 61 CG6481 FBgn0030936 FBtr0074620 3 1 1 60 X 18415999 18416021 CTCAACGAGTATCATCAATCTGG 59 18415961 18415979 ATCATAGGAGGCGTTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34326 FBgn0085355 FBtr0112528 1 1 1 60 X 16926395 16926416 ATGTACCATCTACCATCAACCA 59 16926356 16926375 CTCTGTTTGTTCGGATGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 3 3 3 90 X 16867539 16867557 TGATGCTCATCGACGACTC 59 16867402 16867489 GTGAAGAAGGAATAGTGGAATCC 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074233 3 1 3 102 X 16259516 16259536 AATAGCAATTCGCCATTCGAG 59 16259673 16265362 CAAGGCGTTTGATCTCCTG 58 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 2 2 2 80 X 15687266 15687350 AACTACTTGAAGCCATTGTCG 59 15687392 15687410 AAATCCGGATGAAATGCCC 58 NA Drosophila melanogaster 61 CG1368 FBgn0030539 FBtr0073891 2 1 1 280 X 14068848 14069010 CCTCAACTCAAGATGAAATTCC 57 14069251 14069269 GAGTAGGTCCTCTGGACAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13402 FBgn0030538 FBtr0089267 3 1 1 60 X 14065796 14065814 GTCGATCTACCTGTCCTCC 58 14065754 14065772 ATTTGGATAGAGCTGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12479 FBgn0040871 FBtr0073869 3 1 1 64 X 14045925 14045943 CGACTACTCCAGAGGATCG 58 14045879 14045897 CTTCACCAGGGAATCCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 1 3 3 80 X 9232368 9232387 CACCTGTAAGTTCTATCGCC 58 9232242 9232326 CAGTGATGATCGAAGGTCTC 57 NA Drosophila melanogaster 61 CG6789 FBgn0029745 FBtr0070741 3 1 1 60 X 5026448 5026466 TTCTGGAAGAGATGCTGGT 58 5026490 5026508 TTCAAACTCCGGTTAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 3 3 3 69 X 3603910 3603929 GTTTCCTTTGCGTCTTCTCC 59 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3630 FBgn0023540 FBtr0070385 3 1 1 81 X 2062227 2062245 GGACGTATCGCATGAACTG 58 2064845 2064863 CTGGTTGTTGAACATGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3021 FBgn0040337 FBtr0070173 1 1 1 91 X 921570 921680 CATACAGGAGTACATCACTTCCA 59 921731 921749 TCCATTGATGGATGCCCTC 59 NA Drosophila melanogaster 61 elav FBgn0260400 FBtr0114366 1 1 3 91 X 417083 417101 TTGAGTTGACTCCAACCGA 58 413267 417029 TAAAGTCCAATTTCGCTCGG 58 NA InUTR Drosophila melanogaster 61 elav FBgn0260400 FBtr0100254 1 1 3 153 X 414228 414249 ACACCTACAGTACACATATCAC 57 413262 414116 CATAATAAAGTCCACTTCGGC 57 NA InUTR Drosophila melanogaster 61 CR40560 FBgn0085743 FBtr0114193 1 1 1 60 U 3558099 3558120 CACGGTACTTGTTTACTATCGG 59 3558060 3558081 GGTGGTAAATTCCATCTAAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-C1280 FBgn0086059 FBtr0114335 1 1 1 69 3R 20549572 20549590 TTACGCTGTACTGGGATGC 59 20549623 20549641 GAATCAGTACCCAACACGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15564 FBgn0039833 FBtr0085770 3 1 1 84 3R 27060873 27060891 AGGAGAGTCTTCGCATGTG 59 27059929 27060826 AACAGGTCGTAGTACTCCTG 58 NA Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 2 2 2 84 3R 25991688 25991764 ACATTGAAGTGGTGAGTCTC 57 25991623 25991641 TAGGTATTCACGGCTTCGT 58 NA Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587,FBtr0085586 3 2 2 92 3R 25953647 25953665 TCCTTGCAGTGAGGATAGG 58 25953522 25953540 GAGTACACGGGATAGGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Jon99Ciii FBgn0003357 FBtr0085502 1 1 1 131 3R 25748098 25748116 CAAGGTGCCTTACATCGTG 58 25748211 25748229 TTGATGGTCACTCCACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 2 5 6 206 3R 25705384 25705403 GCAGTTACTCTGACTAGCTG 57 25723060 25723079 CTTGTTGAAGCCGATGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301745,FBtr0301746 2 2 2 107 3R 25662886 25662904 GAATACTGAGTTGCGCACC 59 25662973 25663048 GTAACAATCCAAAGTGGCCTC 59 NA Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 1 2 2 80 3R 25648468 25648553 TGTGACAGGATACGTCTTCTC 59 25648595 25648613 TCCAAGCAATCAGTGAGCA 59 NA Drosophila melanogaster 61 ms(3)K81 FBgn0002838 FBtr0085063 2 1 1 61 3R 22702054 22702074 CCAATTCTTCCGACGATACAC 59 22702096 22702115 CAAACTCAGATTCGAGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14244 FBgn0040607 FBtr0085040 1 1 1 76 3R 22552059 22552077 AGCGTTATTGTTTGGACCC 58 22552117 22552135 CTGGCACTTATGAAGGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nup358 FBgn0039302 FBtr0084813 2 1 1 80 3R 21078950 21079027 TATGTTTGGTCCTCGAAATCCA 59 21079067 21079086 ATGTAAGGTGCTACCGAAGG 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717,FBtr0089715,FBtr0089716 3 3 3 147 3R 19117372 19117453 ACAGATCCTGATGAGGTGG 58 19117243 19117262 CAAAGCGGTAGACATATCGT 57 NA Drosophila melanogaster 61 BG4 FBgn0038928 FBtr0084176 3 1 1 60 3R 17860908 17860926 CGATCCCAAGCACTTTCTG 58 17860950 17860968 ATCATTGCGACCACAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 1 2 4 105 3R 16894645 16894663 GATCCGCATCATTGTCAGC 59 16894732 16896454 GAGGTCGTCCTTGATCCAG 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 1 3 3 81 3R 16678288 16678430 TTGTTACAACAGGGAGGCA 59 16678225 16678243 CGATAACCACGATCCACCA 59 NA Drosophila melanogaster 61 CG7706 FBgn0038640 FBtr0083667 1 1 1 125 3R 14504814 14504891 TGAGGATTTGCTGAAACAAGAG 59 14504977 14504995 CCTTCAGCTTGCTGTTTGG 59 NA Drosophila melanogaster 61 CG5399 FBgn0038353 FBtr0083164 1 1 1 60 3R 11521894 11521985 GTCACTCAGTTGGATTGCC 58 11522009 11522027 ATATCAGGGTCAGAGGCAC 58 NA DesignRelaxed Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 1 2 4 89 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055586 11055604 AAAGATTGCCTTGTACGCC 58 NA Nonspecific Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 2 2 2 93 3R 10441512 10441591 TGTCAAACCTCCTCTACATGG 59 10441644 10441664 CCATTATCGTTGTCCATGTGG 59 NA Drosophila melanogaster 61 CG9602 FBgn0038175 FBtr0082838 1 1 1 128 3R 9543757 9543841 AAATTCCATCCAGTGACATGTC 59 9543650 9543669 ATTTGAAGATGTCGGAGTCG 58 NA InUTR Drosophila melanogaster 61 CG14718 FBgn0037939 FBtr0082426 1 1 1 60 3R 7527246 7527267 TCTACAAGAACAAGATAACGGG 58 7527285 7527306 GGACTCACATAGGTTATAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 3 2 2 80 3R 4600741 4600759 ATTGGGTAACACCGCTCTC 59 4600615 4600703 CCATCCAAGTAAATCTCATATCCTG 59 NA Nonspecific Drosophila melanogaster 61 CG18747 FBgn0042104 FBtr0273255 1 1 1 109 3R 3608532 3609022 CAAGGAGGTTCAAGCTGTG 58 3608441 3608459 ATAGATAATCCTCCCGGCC 58 NA Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 1 1 1 60 3R 3597035 3597115 ACGATCTTAATTGCTATGTGCG 59 3596996 3597017 AGGAACTGCCTATCATATTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 ksr FBgn0015402 FBtr0078766 1 1 1 60 3R 1306903 1306922 TGATTATCACGGACTTTGGG 57 1306862 1306881 AGGCCCATATCACAGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PEK FBgn0037327 FBtr0078770 3 1 1 97 3R 1287864 1287884 TGGATGTGGATATAAAGGTGG 57 1287724 1287808 GTGATCAAACTTGTACTTCCAC 57 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 3 3 3 121 3L 21719351 21719370 AAATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 3 2 2 82 3L 21439404 21439425 GCCTAAGCGAAATAGATTTCCA 59 21439468 21439553 CATCGTGGACACATTCTGC 59 NA Drosophila melanogaster 61 CG14102 FBgn0036906 FBtr0074928 1 1 1 96 3L 19793615 19793836 TGCACAGCTAGATCAATTGC 59 19793538 19793556 CATTTGTTGGAAGGAGGCG 59 NA Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0302208 1 1 2 187 3L 17475388 17479297 GTGCAAAGCAAAGTATCATTGG 59 17475141 17475159 CATGTGGACATTCGTCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302786 2 1 12 107 3L 16895160 16895239 GAGCAGTTGGACAAAGAAGC 59 16895495 16895513 CCTTGATTGCTCCTCTGCT 59 NA Drosophila melanogaster 61 CG9669 FBgn0036667 FBtr0075339 1 1 1 90 3L 16837945 16838020 TTATGGACGTAATGCAGCG 58 16837873 16837891 AAGAAGGTTCCGATGACCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13048 FBgn0036593 FBtr0075475 2 1 1 60 3L 16276615 16276637 CCTCTCATCTTCACTACAATCAC 58 16276577 16276595 TGATGTCCGTCAAAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13071 FBgn0036585 FBtr0075461 3 1 1 82 3L 16254917 16255662 AATCGGATGGTCTGATGCA 59 16255708 16255726 GGAATGCTCAGGTTTCCCT 59 NA Drosophila melanogaster 61 l(3)S147910 FBgn0086699 FBtr0075960 1 1 1 60 3L 12517714 12517732 TGTGTTCATCACAGACGAC 57 12517756 12517774 AAAGGCGTAGATGATGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10646 FBgn0036292 FBtr0075972 3 1 1 130 3L 12496859 12496877 AACACCTCAGTACGGAGAG 58 12496696 12496766 GCTCAAAGACCTTTGATTGC 58 NA Drosophila melanogaster 61 CG42255 FBgn0259140 FBtr0299545 2 1 1 80 3L 11802060 11802078 TCCACAATCACCAGGACAG 59 11801903 11802019 CATTCGTTACCTCTACAGTCCA 59 NA Drosophila melanogaster 61 CG11714 FBgn0036170 FBtr0076156 3 1 1 93 3L 11515597 11515666 GAGTATCTGGCCCATTCGA 59 11515522 11515540 AAATGTGCAATCCGTGTGG 59 NA Nonspecific Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 2 3 3 80 3L 10214547 10214565 TTCGGCATCAATTTCCCAC 58 10214224 10214506 CATGGCATCTATGAGGAATGTG 59 NA Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300238 1 1 3 108 3L 9965488 9966030 AAACAGCCAGAATGTCCCT 59 9966194 9966212 TTCCAGATGAGGAACCAGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17744 FBgn0035730 FBtr0076932 1 1 1 81 3L 7019528 7019617 GCCTTCACAGATATGAATGGTC 59 7019468 7019488 CACCAATGGCCTTAAGATCAC 59 NA Drosophila melanogaster 61 Cpr65Aw FBgn0052404 FBtr0077023 1 1 1 80 3L 6135397 6135416 CCGATACTGCCCAGATACTG 59 6135271 6135355 CATCGCTTGTCTCGAATGAG 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 2 6 6 205 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419168 4419442 GATAAACGGACATGCAGGA 57 NA DesignRelaxed Drosophila melanogaster 61 Drs-l FBgn0052274 FBtr0073081 1 1 1 60 3L 3335758 3335777 GTTCCTAATTGTCCTGTCCG 58 3335717 3335735 ATGTGATTCTTCCGCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073027 2 1 2 69 3L 3160098 3160190 TGAATCATCTTAAGTGGATGGG 58 3160220 3160238 TTATCATTACGCAGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 1 1 3 161 3L 1803312 1803435 GACCTAAAGAACGTGGTGC 58 1803560 1803805 ATCGTCCAGAGCTTGACTG 59 NA Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 1 2 2 81 3L 1314022 1314040 AAAGAGCTCTATTGCTGGG 57 1314085 1314170 TAGGTGTGAGGATCTGCTC 58 NA Drosophila melanogaster 61 CG17180 FBgn0035140 FBtr0072550 3 1 1 90 3L 541882 541900 GTGCCAGTACCAATTGCTG 59 541954 542029 CTTGATCTGCCTTATGCGC 59 NA Drosophila melanogaster 61 5SrRNA:CR33381 FBgn0053381 FBtr0086373 1 1 1 60 2R 15643371 15643389 ATACATCGGTTCTCGTCCG 59 15643329 15643347 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 3 2 2 80 2R 19887930 19887948 TGGTCTGCTTCTATCGTGG 59 19887807 19887889 AGATCCATCATTTCGATCTGGT 59 NA Drosophila melanogaster 61 or FBgn0003008 FBtr0072152 2 1 1 82 2R 19856022 19856100 ATCCTCTCAGAACTGGTAATGG 59 19856143 19856161 TTGTTCTGCTCCTCGATCC 59 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 3 3 3 101 2R 19278839 19278920 ACAACAAGGCTTCCATCTG 58 19278756 19278774 AATTCGTCTTGCGTATGGC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071850 1 1 4 127 2R 18188504 18199208 CCGTCTAGATAAGACGCCA 58 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 Oatp58Da FBgn0050277 FBtr0071779 2 1 1 80 2R 18108126 18108199 CTCCATGCAAAGATTTGCC 57 18108064 18108085 GCAAAGGTCATTGTCATAACAC 58 NA Drosophila melanogaster 61 Gr58a FBgn0041239 FBtr0071728 3 1 1 63 2R 17868370 17868441 GACTTTCATTTGCAGCTGGA 59 17868465 17868485 CCTTATACGTTGACGGATGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG34029 FBgn0054029 FBtr0100084 3 1 1 182 2R 17858674 17858751 GCCTGATTTGTGGACATGG 59 17858510 17858529 GTAAACTTGCGACATTTCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 3 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 3 8 8 80 2R 17194842 17194918 GTCTTAAAGGAGGATCAGCA 57 17194960 17194979 CATTGTATTGGAAACGCTGG 57 NA Drosophila melanogaster 61 CG34202 FBgn0085231 FBtr0112395 2 1 1 103 2R 16640116 16640135 TTCTTAACAGTTCTTGCGGT 57 16640264 16640282 TACTCCTGTCGAGTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34201 FBgn0085230 FBtr0112394 2 1 1 61 2R 16638501 16638587 GCTTAGAAACAGCACCATCC 59 16638609 16638629 GTATACGCGCACATATTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG30151 FBgn0050151 FBtr0086269 2 1 1 60 2R 16416820 16416841 CCAAAGAGGACAATATGGACTG 58 16416781 16416799 ACTTTCGTATGGACCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10822 FBgn0034478 FBtr0086339 3 1 1 179 2R 15838970 15839040 CAGAGACAGATCCAAAGCG 58 15839183 15839201 ACTTCTCCCGCAAATTGTC 58 NA Drosophila melanogaster 61 CG15124 FBgn0034461 FBtr0086470 1 1 1 60 2R 15530554 15530575 CAATATGCTCGACTTTACAGAC 57 15530596 15530614 GTGCAGAGTTATGTTCGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rgk2 FBgn0085419 FBtr0112633 2 1 1 111 2R 14433672 14433766 TTATCACATCACAGGAGGGC 59 14433840 14433858 TTCAATATGCCGACGAGCA 59 NA Drosophila melanogaster 61 adp FBgn0000057 FBtr0086744 3 1 1 217 2R 14040036 14040058 CCAAATGTCTGGCTATAAATCCC 59 14040298 14040319 GCCATTGAACGTAAGATAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34386 FBgn0085415 FBtr0112627 1 1 1 80 2R 13978157 13980062 AACATCAACCAAAGGTCAGC 59 13980102 13980123 TAACTCATTGTTGGTGTACTCG 58 NA Drosophila melanogaster 61 CG8950 FBgn0034186 FBtr0087013 1 1 1 138 2R 12948298 12948372 GGATCTTCAGGATCCTGCT 58 12948178 12948196 AAAGCAGATCTTCTCAGCG 58 NA Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 3 1 1 60 2R 12943886 12943907 GAAGGCTCAGAAGATAACTCAG 58 12943783 12943868 TCTGTTTCCCTATTTGTTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231 1 1 2 190 2R 12025935 12026281 AACTTCCAGCTATCCACGA 58 12027880 12027898 ATGCTGATTTCCGTCTTGC 58 NA Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 2 2 2 80 2R 11914691 11914710 CGTGATCACCTTCAACATCC 59 11914552 11914650 TTAAGTTGTTCAACTGTGGCC 59 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320 3 1 2 111 2R 11576215 11576284 TCGTTTAACTCGCTGTTGC 59 11576122 11576142 GTAGTTGGTCATTCTCCTTGG 58 NA Drosophila melanogaster 61 CG8157 FBgn0034010 FBtr0087390 1 1 1 60 2R 11213780 11213859 ACTGATTGTTGTTCTTGCCC 59 11213739 11213757 ACCAGGTCCAAATTGAGGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 mRpL53 FBgn0050481 FBtr0100285 1 1 1 81 2R 9842482 9842500 CAAGCCAGAAATCGTCTGC 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG4630 FBgn0033809 FBtr0087765 3 1 1 89 2R 9103755 9104117 TTACACTAGGTGCCAACTG 57 9103684 9103702 TGAACGTGTAGATGACTGC 57 NA Drosophila melanogaster 61 qvr FBgn0260499 FBtr0114575 3 1 1 84 2R 7334861 7335042 GAGATCACCGTACGAGGTG 59 7335090 7335108 CATCATGCACACGTGATCG 59 NA Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243,FBtr0088529 1 2 2 60 2R 5476885 5476906 ATTAACACTTGGAACTTCACGG 59 5476927 5476945 TGCTTTGCTTCAGGATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k10201 FBgn0016970 FBtr0088505 3 1 1 62 2R 5287096 5287114 TGGACGAGGTGATAGAGGA 59 5287140 5287158 GATGTCCAAAGCTGAAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13742 FBgn0033372 FBtr0300369 1 1 1 88 2R 4974151 4974170 CAATTGGCTTAGGGAAACTG 57 4974022 4974103 GAACAATACGATTGTCGATGTC 58 NA Drosophila melanogaster 61 CG13743 FBgn0033368 FBtr0088662 3 1 1 87 2R 4938126 4938358 TCATCCTGATGGTCAGATGC 59 4938058 4938076 TAATAGCCGTACTTGCCGT 58 NA Drosophila melanogaster 61 CG9455 FBgn0033113 FBtr0086162 1 1 1 80 2R 2770072 2770092 CAGGATGTCGAGATCTTTCTG 58 2770131 2770222 AATACCCAGCTGATTAAGTACC 57 NA Drosophila melanogaster 61 CG7856 FBgn0033056 FBtr0086024 3 1 1 60 2R 1946071 1946091 GATCAGGAGAAGATAGCGGAC 59 1946031 1946050 TGCTGCTAAAGCGATTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)09851 FBgn0022288 FBtr0086043 3 1 1 60 2R 1642397 1642417 CCGATGACGGCTTATATTGTG 59 1642439 1642457 TAAGGTTGTTGACATGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 3 5 5 80 2R 580804 580822 TCAAGGTTTGGTTCACCCT 59 580663 580761 CGATGAGCAGACTCTATCCT 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640a FBgn0083026 FBtr0113540 3 1 1 61 2L 20418524 20418544 TGGGAGACAAAGTTTACATGC 59 20418564 20418585 TATATCGGAGCGTTGTAGACAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4:25F FBgn0041719 FBtr0079108 1 1 1 63 2L 5565660 5565678 CTGAGCTGCGATTATTGCT 58 5565705 5565723 CGTAGATCCTTACGCTGGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33888 FBgn0053888 FBtr0091892 1 1 1 60 2L 21488135 21488154 AGAAGAACATCACCAAGACC 57 21488094 21488112 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31674 FBgn0051674 FBtr0081423 1 1 1 80 2L 20832394 20832415 CTGCTGGACTAGATGTTATGGA 59 20832451 20832673 GAGTAACCACAACATTGTCTAGAG 59 NA Drosophila melanogaster 61 cdc23 FBgn0032863 FBtr0081362 1 1 1 123 2L 20460379 20460461 GTTGTGTAATAGGCAACTACTACAG 59 20460542 20460560 AACTCGTGTCCCATCAAGG 59 NA Drosophila melanogaster 61 CG17571 FBgn0259998 FBtr0081376 2 1 1 60 2L 20256608 20256626 CCTTCAAGTACCACGAGGG 59 20256566 20256584 TTGATGATGGCCACATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grip71 FBgn0032705 FBtr0081099 3 1 1 83 2L 18709470 18709551 CATAGATGGCGACTCTACTC 57 18709597 18709615 GTCACGGCTCCTTTATAGG 57 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 3 2 2 95 2L 16992039 16992057 ACAAGCACCAGAGGATTCC 59 16992114 16992665 GTTGTTTGTCTTCGAGCTGAG 59 NA Drosophila melanogaster 61 CG13272 FBgn0086673 FBtr0080914 1 1 1 141 2L 16811807 16811825 CTTTGGAGACGATTGGCAG 58 16813530 16813548 TAGTCGTAGGTGGGATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300932,FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 2 6 9 285 2L 15263655 15263778 GATGACATGCACACTTGCC 59 15263388 15263407 TAACGGTCAGTGTCTCTAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4691 FBgn0028870 FBtr0080670 3 1 1 60 2L 14761479 14761498 GTGTATTGGGCAAACTGGAG 59 14761518 14761539 CATTTCGATGATTCCTTAACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080396,FBtr0080395 2 2 2 89 2L 12696303 12696321 AAAGGATCAGAGCAACCTG 57 12696374 12697479 GTTCCATCGAAGATCTGCA 57 NA Drosophila melanogaster 61 Or33c FBgn0026390 FBtr0080280 1 1 1 94 2L 11938687 11938784 AACTCTTGGTGCGATTCCA 60 11938842 11938860 AATGATGCACAGAGTGGCT 60 NA Drosophila melanogaster 61 Sfp33A3 FBgn0259964 FBtr0300310 2 1 1 91 2L 11840047 11840070 CCAAGACCTATAACAACTACTGTG 59 11840119 11840138 ACTTTCATTGCACTGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 giac FBgn0032368 FBtr0080268 2 1 1 95 2L 11610907 11610986 AAACTTCGATGGATTGCGA 57 11610830 11610848 CTGTAGCTCTGAGTACGCT 58 NA Drosophila melanogaster 61 mRpS7 FBgn0032236 FBtr0080007 2 1 1 120 2L 10386772 10386864 AAACTTCAAGGCTCAGCTG 58 10386947 10386966 ACATGGTAAAGCTTGGACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13134 FBgn0032182 FBtr0079968 3 1 1 61 2L 10097797 10097816 TCACTTCGACGAGAATCCTC 59 10097026 10097044 CTGATTGCGGCTGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13096 FBgn0032050 FBtr0079698 1 1 1 118 2L 8510569 8510587 CTACGACTACCTGTTGTGC 58 8510121 8510139 TATCGTTGTCCTTGCTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 3 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688026 7688046 CTTAACAACAGCTTTGAGCAG 58 NA Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 1 1 1 60 2L 6745192 6745216 GGAGGCCATTATCAATGAATATGAG 59 6745101 6745175 TTTGTTGTTTGAAGCTCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13766 FBgn0031834 FBtr0079330 3 1 1 60 2L 6565466 6565484 TCTGATGCAGAAGACTTCG 57 6565424 6565442 CCAGCGTGTTTAGTTGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15438 FBgn0025684 FBtr0077456 2 1 1 89 2L 4447842 4447914 ACCAGTCAGAATTTGTGCC 58 4447771 4447791 AATCCCAGTCAGAAGAGTACC 59 NA Drosophila melanogaster 61 CG4267 FBgn0031405 FBtr0077751 3 1 1 83 2L 2242930 2243566 CACGTCATCAAACAAGGATAGTC 59 2243607 2243627 GGTATGCGTTCTTAACCTTCC 59 NA Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0078079 2 1 2 181 2L 551311 551329 ATCGACAGGTTTCCCAAGG 59 548209 551166 TGGTACGGATTTGGTTCGT 59 NA Drosophila melanogaster 61 CG11601 FBgn0031244 FBtr0078137 2 1 1 142 2L 282762 282780 TGAGGGACTATGTGTTCGC 59 282490 282656 CACGTGATTCAACCAGCTG 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 2 2 3 187 2L 132078 132098 TCACAAGACTTCCAAACATCG 58 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 3 2 2 85 2L 592323 592341 ACACTACCCAGATGTGGTG 59 584430 592274 GGTTCTTGAACCACACCTC 58 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 3 3 3 87 2L 862622 862640 AAGATTGTGCTGGTCACCT 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 3 2 2 91 2L 952065 952083 AAGGAGACGGCTATTACGG 59 952137 952269 GATCGTAGACGTTGCTTGTC 59 NA Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 1 2 2 80 2L 1359510 1359531 TCGACGGATTTCATAGAGAAGG 59 1359402 1359472 CTTTACAGTACCAGTTTGGGTG 59 NA Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 3 1 1 74 2L 2652123 2652141 TCCGTTTGCAATGGAAAGC 59 2652007 2652026 AAATGACATCACACTCTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 1 4 4 80 2L 2738720 2738740 CAACAACTGGTACAAATTGCG 59 2738780 2738885 ACCGTCGAGAAGATGATATGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 1 3 7 116 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 1 2 2 82 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025879 3025899 GAGTCGTTCTGAAGTAGAGCT 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 3 4 11 180 2L 3626210 3634251 TATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 2 4 9 80 2L 3884509 3886993 AATGAATCAGGAGTCACAGG 57 3884448 3884466 AACAGTTGATTGCGTTTCC 57 NA Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 3 2 3 196 2L 4372531 4378918 GAACAGATTATCTATCCCGGTC 58 4379075 4379093 TGATCGGTCATCATGATGC 57 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 3 4 4 103 2L 4845328 4845346 GTAATTCGGGCAAGTTCCC 58 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 1 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0100270 3 4 6 89 2L 5044610 5044629 GCCGTACATAATCATACGGG 58 5044681 5045831 ATGTCGTCAGCTTTCAACC 58 NA Nonspecific Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 2 3 3 60 2L 5044640 5044660 CTCCTACAGCCACAAATATCC 58 5044681 5045832 GATGTCGTCAGCTTTCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 2 2 5 99 2L 5277169 5277941 TTTCATTGAGCGTTCACTGG 59 5277089 5277107 GAGTTTGGGTGAAACCTCG 58 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 3 2 4 81 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718592 5718666 TAGCATAGTTCTGTATGCGCT 59 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 3 4 4 112 2L 5984932 5985036 TACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 3 2 2 138 2L 6051893 6051911 AGAGAAGACTCCAGGTCAG 57 6052010 6052088 ATATCGGTACTTCTCTTCTGTG 57 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0091497 1 1 2 80 2L 6301616 6301634 TCATCGTCGAGAAACTGGG 59 6301675 6303078 ATTCGGTTAGATCATTCAGCAC 59 NA Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 2 1 1 72 2L 6558549 6558567 CTTATTCCATCGGCCTTCG 58 6558950 6558968 TCCATTGCACGTAGGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 3 3 6 122 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690127 6690983 ACTAGAATGTTGCCTGAGGG 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 3 3 6 82 2L 6688732 6688809 GCATCAACGAGATTGGTTCC 59 6688669 6688687 GGATCTGTCTAGGCAGCTG 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0079431 3 1 2 152 2L 7016361 7016444 TTTCATTGACTCACATAGTGCC 59 7016230 7016248 GAAGGTAAGCCGATGAGCA 59 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 3 2 3 105 2L 7041151 7051378 ACTATTTCCTTCTATGCGGCA 59 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079461 3 1 5 115 2L 7456823 7456841 AATTGTGGCGTTCTACGTG 58 7455749 7456747 GGTTCTTCAACACCTGATTCAG 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079510 1 1 5 80 2L 7696803 7698741 TTATCCTTACAACACTGGTCCT 58 7696744 7696762 TATCTTGGGCGGGTAATCC 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185 1 1 3 80 2L 7986073 7986145 AACGTAAGTTTGCCTACCA 57 7986187 7986207 TACGGTTCTATTCTGTTCCAC 57 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185 3 1 3 80 2L 7986074 7986146 ACGTAAGTTTGCCTACCAC 57 7986188 7986208 GTACGGTTCTATTCTGTTCCA 57 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG34441 FBgn0085470 FBtr0112745,FBtr0112744 1 2 2 60 2L 8527338 8527357 AGCCTTGCCTAAGATGACAG 59 8527297 8527315 CCTGGAATTCACAACTCCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 3 2 2 81 2L 8992725 8992746 ATCCCACTACACAACTGTAGTC 59 8992788 8992863 CATTCCTGGCATGGAAGGA 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045 3 1 2 186 2L 8992478 8992697 AAACTATTAACAGGCTCCTGG 57 8992902 8992920 GAAGACCAGGCAAATGGAG 58 NA InUTR Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 2 3 3 80 2L 9575427 9575512 GTAAACTTCGCGTAAATCGC 58 9575366 9575384 TCTTCACAAAGTCGGTGTC 57 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 1 3 3 80 2L 9957836 9957854 AGATTCTCAGGGAGCAGAC 58 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 2 2 3 182 2L 10322827 10323683 ATGATAAGGATCCCTACCGGA 59 10323895 10323913 GATCATCGGTTTGCAGGTG 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 1 2 3 174 2L 10426971 10426989 ACTCGTTGGCAAATTAGGC 58 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 1 2 2 80 2L 10766272 10766405 CAGACTGTAATCCAGCCGA 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 2 2 2 80 2L 11511227 11511246 GTCAACGGTGTATGATGAGG 58 11510838 11511187 ACATACCTTAGAGTCTCTGCTG 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 1 3 4 81 2L 11799399 11800169 TACTTTGGCATACAGGCGA 59 11799336 11799354 TGGTTAAGCAAGTGCTCCT 59 NA Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 1 2 2 95 2L 11852015 11852091 TTTAAGCGGTCCTATCCCA 58 11852148 11852168 CTGGCTAAGAAACTCTGAGAG 57 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642,FBtr0112643 2 2 2 191 2L 12623012 12625465 ATCGAATGCTTCCGATTGC 59 12625619 12625638 TACTGATGGTGGTTCAGGTG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090017,FBtr0090013,FBtr0090018,FBtr0090016,FBtr0090015,FBtr0090019,FBtr0090027,FBtr0090020 2 9 17 123 2L 12724234 12724252 GTTTCGAGAAGCAAGTGCT 58 12724339 12724485 GTGACCAAGGAAACCAGGA 59 NA Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 2 2 2 91 2L 13903705 13903790 ATCTTTACAGATCCCTCTACACC 59 13903636 13903654 GATTTCGTGCTGGAACAGC 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 3 3 9 177 2L 15261626 15261727 AGTGGAAATTGAATGCGATACG 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300935 2 1 9 94 2L 15259278 15261725 TGGAAATTAACACAGGCAACAG 59 15259205 15259223 CAGTAGATCCGACTCGGTC 59 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080939 1 1 2 80 2L 16702877 16728201 CGAATATGGGAGTTTGCTTGG 59 16702817 16702836 GAATTGAAGGACCCAGTCCT 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 2 2 10 81 2L 17402473 17404069 GAACATCAACGAGCAAATACTG 58 17404108 17404129 CAGATCGGATACCTTTATGCTG 58 NA Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 2 1 1 117 2L 17411532 17411550 AATCTCAGCCAGACGAAGG 59 17412807 17412825 TTTCGCCAGTCATTTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 2 4 12 90 2L 17717898 17717917 TTCAATCCCAACGATCTGGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 3 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128062 18128145 CTTATCCTTGTGCATCTGGT 57 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 2 2 5 187 2L 18387305 18388389 CCACAAACGAAACTCAAATCG 58 18388538 18388556 GTGATGGCGTCTTTCAACC 59 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 2 3 3 84 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457304 AATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 2 2 2 81 2L 19762293 19762495 AGAAACAGGGCAAATACATCG 59 19762232 19762250 ATTGAACCGATCGACACCA 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 2 4 9 130 2L 20876958 20876976 ATCTGCCCACTAGTCAGTC 58 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173 1 1 2 132 2L 21578834 21578853 TGTATGAGAGGTACGCATCG 59 21578520 21578739 AACTGCAGAAATCGCAAGC 59 NA Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 2 3 3 142 2L 21627751 21627853 GTGACTCAACAGATGCTCC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 3 3 3 80 2L 21680174 21680769 AGCTAATGAACCGATTGTGG 58 21680113 21680131 TGTTGTCAGCCTCTTTCTG 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959 2 1 4 88 2L 21720474 21725078 ATCTCCAGTTGCTATGGCC 59 21725129 21725148 ATCAATGCCGAACTTAAGCG 59 NA Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 1 2 2 101 2L 22168194 22168212 ATGCCTCTCAATCAGGGTG 59 22168058 22168131 TATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111114 1 1 2 60 2R 482946 482966 CTCTCAAACACAGCCTAATCG 59 486791 486812 GAAAGGTCCATGTTTATGTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 3 5 5 80 2R 580804 580822 TCAAGGTTTGGTTCACCCT 59 580663 580761 CGATGAGCAGACTCTATCCT 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299920 1 1 4 118 2R 1327150 1327170 AGTGTGGTATTCGTAGAGCTC 59 1327249 1340794 GTTGAGAATGACTCCTTGCG 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 1 3 3 82 2R 1864960 1865499 CCTGCATGTTATTCTTATGTCG 57 1864899 1864918 GTACTTCCAATACGGGACAG 57 NA Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 2 2 2 80 2R 1896998 1897893 TGTGTCCAGATCGAGAAGC 59 1897935 1897955 CAAAGACGTTCTGTCGATCTC 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 2 3 5 123 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642302 2642320 TGTTGACCGAATTGCTCAC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088957 3 1 3 92 2R 3415471 3416542 GTTCAATGAGTGGAACAACAG 57 3415399 3415418 GATTATGGTGATCGGGATCC 57 NA Nonspecific Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 2 2 3 84 2R 3592978 3592996 ACGATGTTCCAGAAAGGCT 59 3592854 3592933 TCCACTTTACTGTTTAGACCGT 59 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 3 3 3 117 2R 3689615 3689695 AAGTGTTCCGACTCGACTC 59 3689516 3689534 TCGTAGTCGACAGAATCGC 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 2 3 4 190 2R 3872609 3872627 AATGAGTCCAATGACACGG 57 3870501 3872392 GACATACTCGGCCTTAACC 57 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718 2 1 3 91 2R 4607275 4607369 CTCAACTATCAGAACTTCGATATGG 59 4607208 4607226 TTTCCCTTGATGGTTCCGT 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 3 2 4 84 2R 4758458 4758477 ATCCTTTGGTAAACAGTGCG 58 4758521 4759738 GTTCAACGAGAAGCTAATTGTG 58 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 3 2 2 80 2R 4909359 4909481 AACATTGCTTTCAGGGACC 58 4909297 4909316 CTGCAGACTGTAGTCATTGC 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 1 5 5 80 2R 5066161 5066179 GGTTGGTTTGAGACATCCG 58 5066038 5066123 GTTGATGAGTATCTTATTCACGAGG 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 3 2 4 176 2R 5118142 5119261 ATTTCAGTGAATGTGGGATGG 58 5117986 5118004 GTCCTCCGAGTAGTTGGTC 59 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 1 2 2 82 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185029 5185780 CTGATATGGCAGCCTTTATGAC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 1 4 5 110 2R 5423496 5423514 GAGTTGGAGAAGGTCAGGG 59 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 3 4 5 177 2R 5424067 5424085 GAAGCTCATGGATACGCAG 58 5424433 5424527 CTTTAAGGCTTGTTGCAAATCC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 2 4 5 111 2R 5423495 5423513 AGAGTTGGAGAAGGTCAGG 58 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467,FBtr0302051 3 2 2 159 2R 5594444 5594539 GTCTTTAAAGATCACATACGACCC 59 5594653 5594675 TCTCAGTGTTTATATGGACCTCC 59 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 2 2 2 82 2R 5608220 5608240 CCAGAAGTTGTGAACTTTGAC 57 5607468 5608176 CCTGAGATGAGCACATAGC 57 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112902 3 1 5 80 2R 5885051 5885221 GTCAAGCTAGCATTCCTGG 58 5884989 5885008 ACTAATGCTACGCTGAATGC 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 3 3 5 85 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884050 5884069 CTCGTAGTCGTCAATGTTGC 59 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 2 2 2 66 2R 5937119 5937137 CTTTAGCGGACATGGTGGA 59 5937275 5937293 GATGCGGTACTTGTTCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 3 2 2 82 2R 5966672 5969016 CATTCTCGCACTAACGATCTG 59 5969060 5969078 TATCGACGACTCGCTTCAG 59 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349 2 1 2 140 2R 6206586 6206604 AAACTGTCACATCAACGCC 59 6206705 6206786 CAGATATCGGGTCTAATTGCAC 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089347,FBtr0089357 1 2 26 180 2R 6419754 6419772 ATTTGACACTGGACGAGGA 58 6371745 6419549 TTCCTGCTCAAATCTTGGG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 3 3 3 94 2R 6527873 6527891 GTCCTTGGATGACCTGGAG 59 6527947 6528031 ACTGTCGATGATGTTCTTCGT 59 NA Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 1 3 3 80 2R 7174158 7174231 AGGAAATTATGGACTCACCTG 57 7174098 7174118 TTATGATGCGGGATTCATCTG 58 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 3 2 5 172 2R 7198803 7198823 GTGATAAATCCGATGCGTAGC 59 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 3 2 2 179 2R 7263254 7263272 ACCCGATGTGATTACCCTG 59 7263415 7263755 GGATAGCTGTCCGATTTGC 58 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0113066 2 1 3 86 2R 7469646 7470536 AGAGCATTATGAAAGCGTATGC 59 7469581 7469599 GTTTCTTCGAGGGAGTTGC 58 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113069 2 1 4 99 2R 7532456 7538328 CGATTCGATCAAACATTCCTAGG 59 7532379 7532398 CATCCAGGTAGGAGAAGACG 59 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 1 2 4 129 2R 7532455 7532918 GTCCCAAACATTCCTAGGC 58 7532261 7532362 TTTGCATACCTGTGCACAG 58 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113072 3 1 2 94 2R 7765782 7765855 GCCAAAGTAACTACAGAGGC 58 7765707 7765728 ACCTCGATGATCTTACCTAGAG 58 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088024 1 1 3 115 2R 7914645 7914736 CGTCAATAGATTAGTGTGCCG 59 7914550 7914568 GTTTGCAATCGATTGGCTG 58 NA Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 2 1 1 113 2R 8079383 8079401 ATCTCAATACTCGGCCTCC 58 8079538 8079557 TATGTAGGTCATCGGGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0087899 3 1 2 197 2R 8222861 8222946 GCCTGGTAATGTTGAATTAAGC 58 8223102 8223122 TGGATATGCTAAATCAGGGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 1 4 4 101 2R 8229049 8229067 AGTGTTCCACCGATCACAG 59 8228908 8228926 TGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 2 2 2 81 2R 8309524 8309598 TGTGCTAGATGATGCAACC 57 8309461 8309480 ATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 1 1 1 102 2R 8816823 8816841 ATGCAACTGGACAGATTGC 58 8817349 8817367 GTAGAGTCCGTCTGTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 3 2 6 88 2R 9148386 9150153 TGACAGTCTTCCAGGTTACC 59 9150204 9150222 GTCCTCCTCGTTGATCTCG 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 3 3 3 159 2R 10116657 10116675 TCTTCGGTATCTGCATTGC 58 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 1 5 5 80 2R 10790219 10790299 CGACAGTAATGGCAACACAG 59 10790158 10790181 TTAGAATCCAGCAGTATGGATACC 60 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 3 3 6 81 2R 10849117 10849139 CAAGAATATCTCATACGAGGAGC 58 10848997 10849079 TTTGATGGTAAATGGCTGATCC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 3 3 6 81 2R 10849117 10849139 CAAGAATATCTCATACGAGGAGC 58 10848997 10849079 TTTGATGGTAAATGGCTGATCC 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 2 4 6 80 2R 11172468 11178448 ACCAATTGGGTGTTTCACC 58 11172406 11172427 GCATGGTATGAATTTGATGCAC 59 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113083 2 1 5 63 2R 11443479 11443497 TTACAGGCCTAGATCGGAG 58 11449321 11449342 CTGTGCGTTGAATACATTACGA 59 NA DesignNoJunction Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 1 3 5 135 2R 11773780 11773798 ACCGTGATATACGAGACGG 58 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 3 4 5 89 2R 11826756 11827426 CGGCCTTATGAACAACCAC 59 11826685 11826705 GGCATAAAGCTGTTCATCAGG 59 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 1 3 3 85 2R 11971383 11971469 CCCTTCAGTATTTGTCATCATACTG 59 11971322 11971341 TTATGTGTAGGCTCTTCGGG 59 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 1 3 3 101 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471726 12471744 ATCCGAAAGATCCTGCTCC 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 1 2 3 168 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752379 12752397 ACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0087048 2 2 3 90 2R 12818704 12818722 TTTGCTCCTATGTGGTGCA 59 12818776 12819979 TTTGGTGAGTCCGAATCGA 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290299 2 1 7 80 2R 13239795 13260587 TTCCGACAGATTAGAGTTACTG 57 13260626 13260646 CTACAATTTAACCGACTGCAC 57 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 2 2 4 86 2R 13619770 13619836 CGAACTATTGGTCGCTTGG 59 13619886 13619904 AAGCTCATCACGAACAGTG 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300540 2 1 7 196 2R 13727107 13727125 AGGATCACATACTGGACCA 57 13727285 13728261 GCAGTAATCCGCATTTAGC 57 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 1 2 3 196 2R 14327262 14327283 GTCACCGAAAGATAAACGAGTC 59 14320272 14325090 ACTTGTAGGCCTCTTTCTCG 59 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 1 2 3 196 2R 14327262 14327283 GTCACCGAAAGATAAACGAGTC 59 14320272 14325090 ACTTGTAGGCCTCTTTCTCG 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0086660 3 1 4 145 2R 14520618 14520705 AAATGCAGAGTTATGGCAACC 59 14520426 14520444 GACATTTACGCCTGATCCG 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 3 2 3 95 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911798 14911816 TCAGATGCGAGGCTATCAG 59 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0086574 1 1 3 80 2R 14946974 14947104 CCACTCCAATCAAATAAACGCT 59 14947140 14947163 CTAACGTATACTTACACCCAAGGA 59 NA InUTR Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 2 5 12 169 2R 15062803 15063700 CAATTCACTTGGACCACGC 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 3 2 2 82 2R 15249502 15249523 CCTTACTTCATCTACTTCTCGT 57 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 1 7 10 80 2R 15295681 15295699 CGTCACAGACGATGAACTC 58 15295551 15295639 GTGTCGGTATATTCACCATGC 59 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473 1 1 2 96 2R 15558645 15558874 AGGCTAATGCGAAATCAGC 58 15558934 15558952 CGCACCAGGATAGATTCAC 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 3 2 5 87 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212364 GGATGAATGGAGCTAGCCA 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 3 3 5 80 2R 16483311 16485065 AGGACTCAGTATAAAGCCACTG 59 16485963 16485985 CTCTATATCCGCCGATATTTGGA 59 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 2 4 4 90 2R 16557769 16557787 CGATAAAGTTGAGCTGCCG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 3 3 3 115 2R 17069256 17069349 GTAGAGGGAGTCCACATGTG 59 17069427 17069445 AATTCCTCACGGGTCTTGG 59 NA Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 1 2 2 80 2R 17557087 17557108 GTGGAATCGATTTGGAGAAGAC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 1 2 2 61 2R 17974258 17974276 CAAGAATGCCAATCCCGAG 59 17974053 17974071 TGCTATTCAGCTCAAGAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 2 2 2 86 2R 18079226 18079244 ACTTCCCAGGTCCTTACTG 58 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 2 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213336 18213357 CGTAGTCATATTGAGAGTCGCT 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 4 5 115 2R 19468991 19484433 GGTCAACAAACAGTATTCGG 57 19484508 19484591 GTGTCATTTCCGTCTTTATGTC 57 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 1 3 3 258 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596355 19596375 GAACATGGACTTGATCTTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 2 3 3 259 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596356 19596376 TGAACATGGACTTGATCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 1 2 3 80 2R 19648426 19648445 CGGACATGGGAAAGTATCTG 58 19647294 19648386 ACATATCGAGTTTGGTTATGGC 59 NA Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165 2 1 2 185 2R 19958351 19958370 CTTTCTCTAGCGAGCTTGTC 58 19958517 19960236 TTGGCCAATCAAAGAGTAGG 57 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 3 3 3 84 3L 201357 201447 AGTATTGTCAGACCGTGCA 59 201495 201513 TTCATCACCTGTTTGGCCA 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 3 5 5 99 3L 1743821 1743909 GAACTTGACAAACGGAGCTC 59 1743971 1743989 GAGCAGAACAGGATCCCAG 59 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 1 2 4 107 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878550 1881139 CATTAAAGGCCTCGAATCCTC 58 NA Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 1 2 2 80 3L 1890386 1890407 GTTTGCTGTTTATGAAGTCGAC 58 1890446 1890632 CCACAATCATGCAAATAGCTG 58 NA Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 3 2 2 117 3L 1889846 1889864 TACGCCTCCAAGTACATCC 58 1889945 1890033 GATCACCGATCCACTCTGG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 133 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463164 2463182 TCCTTGAATAGCTGCTGGT 58 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 2 4 4 80 3L 2498019 2498105 CTCTGGAAGATGTGAAGATAAACAC 59 2498141 2498161 AGATCCAGCGATTTACTCCAG 59 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 4 5 117 3L 2604269 2607702 TAACCATCAGAAACAACGTGG 58 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 3 3 3 80 3L 3150146 3150226 ACTTTCAGGCTTTGTTCACC 59 3150267 3150287 TCTTTAGGTCATCGTACTGCA 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 2 7 13 128 3L 3588067 3593334 TAACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 2 7 13 128 3L 3588067 3593334 TAACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 3 3 3 80 3L 4082635 4084744 AACTGACGGCATATGATCTC 57 4082574 4082593 CATCGATTACCTTCAGCAGG 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 1 4 6 238 3L 4418265 4418283 AGGCGATGTAATTGAGGTC 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 3 2 5 181 3L 5160148 5161352 AATGTAAAGGTTACGGCTTCG 59 5156995 5157014 TAGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 3 2 5 139 3L 5160144 5161352 AATGTTACGGCTTCGTCGA 59 5157064 5160041 CTGTTCCTGTTGAATGGCC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 3 4 10 83 3L 5538088 5538107 CGAACCGTCAGTACTATTCG 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134 1 1 2 112 3L 5555965 5556198 CATATCACCACCAACAAGAGC 59 5555873 5555891 ACCATGACCTTGTTGACCA 59 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 2 4 4 80 3L 5921671 5921691 CTTCAATTCCAAGAATGCGGA 59 5921731 5921814 GTGGTTTGGATCTTGTACGTC 59 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091477 3 1 4 157 3L 5920999 5921336 TTTAGTTACGTCACCTTTGTCG 59 5921694 5921712 GACTTGATGGTCATCGTGG 58 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 3 3 3 81 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609818 6609836 GCGCTTTGAAGATGTCCAG 59 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 1 2 2 62 3L 6940962 6940980 AAAGCGCCTGATCTATGGT 59 6941006 6941094 CATTTGATGCCAGTTGCAC 58 NA DesignRelaxed Drosophila melanogaster 61 mp FBgn0260660 FBtr0301958 1 1 11 174 3L 7042667 7043281 ATACGAAACGTGGTATCCG 57 7044342 7044360 GGTGTCCAGATTCTGTACC 57 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552 2 1 9 88 3L 7158086 7158104 TAACCTGCTCATCCCAACC 59 7157941 7158036 GACTTTGCTTGTGTCTGTAGC 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 1 6 9 124 3L 7157973 7158040 GTTTGCTACAGACACATGCT 58 7157868 7157886 ATGGTGGCATAATACCGCT 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 1 5 9 181 3L 7160482 7160500 GTATGGCAATGACCAGCAG 59 7160240 7160338 CAAACAAAGGATCTGCCTCG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 2 6 9 124 3L 7157973 7158040 GTTTGCTACAGACACATGCT 58 7157868 7157886 ATGGTGGCATAATACCGCT 59 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690 3 1 2 87 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324324 7324407 TTGGAAACAGTCTTCGTCG 58 NA Nonspecific Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 1 5 5 130 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 1 2 2 80 3L 7755271 7755289 GGACAACTGTGGATTCCGA 59 7755333 7755409 GTGAAACCTGTGCAATCCC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076773,FBtr0076774 2 2 5 138 3L 7895364 7896303 TGGAAACTCATTCTGGGACC 59 7895245 7895263 CATCCTTCTTGCGTATGCC 59 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 2 5 5 126 3L 9101076 9101096 TATACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 2 2 3 143 3L 9360648 9360666 CTGCTCCAAGTGTTTCTCG 58 9361110 9361215 GCACTCTGTGATTTGGTGG 59 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428 2 1 2 105 3L 9490533 9490728 GATTGGCAATCCGAATGCA 59 9490446 9490465 CGATCGTCTGTACACAACTG 58 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 2 2 3 151 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574672 9574690 ATTGAGCAACTCGATGTCC 57 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0076344 1 1 4 114 3L 9894013 9894031 AAACACGACAATGCTGTCG 59 9894109 9895259 CTCCATCGCTCTTAAGCGA 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 3 3 4 127 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032745 11032763 TCGAACGGATTGTAGTTGC 58 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 2 2 2 100 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094450 11094471 GGAACTCCAGGCAAATATAACC 59 NA InUTR Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 3 2 3 174 3L 11730334 11730353 CGAAACATCTGCACTACCAC 59 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 2 3 4 88 3L 12558038 12558056 TAATTACCAGGAGCTGGCC 59 12534465 12538505 AGTGTAGAGCGGTATAGCC 58 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 3 4 4 80 3L 12801569 12803316 TAAGATGGGCATTCGTCCA 58 12803360 12803378 CCGATGGGATTAAGCTGTG 58 NA Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 3 2 2 60 3L 13000062 13000082 AAACATTCGTTACCCTTTCGG 59 13000103 13000122 TCGATCTAGTTGCTTCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 1 4 4 83 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901999 13902017 AACACTTCTCGCAGAGTCC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 2 2 6 149 3L 14219496 14223286 ATGAGCAACTGGAACTGCT 59 14223399 14223762 GTTCCGACTCTCGGTACTG 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 2 7 7 80 3L 14407795 14407883 AGGCTAAGGAAATTACGATCC 57 14407735 14407755 TTCGATCACCCTTCTTTAGAC 57 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 1 2 4 94 3L 15301925 15304066 GATGATTGTGGGACTTTCCA 57 15304123 15304141 ATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 1 1 3 94 3L 15516677 15516696 ATATAGAAGCCGATACGCCC 59 15515671 15516626 GTTAAATGGTCTATCTGAATGTGGG 60 NA Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 3 2 2 82 3L 16118810 16118830 CACAAGAATGTCAAGATGCTG 57 16118872 16118954 TCTTTATCCAGTAACTGAGCC 57 NA Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 3 2 2 154 3L 16126324 16126397 GCAAAGGGCAAAGAGACTG 59 16126513 16126533 CAATTTGGTTCTGTGCATCCA 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 1 4 4 65 3L 16346788 16346806 ATCATCAACTTCACCCGGT 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790 3 1 2 98 3L 16624521 16639918 AGCATAACGGTACCAAGCA 59 16622271 16622290 GAATGTGAGGTAATGGACGC 59 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 2 3 3 80 3L 16665633 16666164 GACGGAGGCATTATTCTGGA 59 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 3 2 2 69 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854419 16854440 ATGCATGTAAACTGTGAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 2 2 2 117 3L 17233853 17233871 CCGATATGATGGGTGGAGG 59 17233700 17233772 GCAACATCCTTGAAACCCA 58 NA Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 2 2 2 80 3L 17885509 17885527 TGACGACCAACTTCATCAG 57 17885373 17885467 TGCCAAAGATCATCAGTATGG 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 3 6 6 92 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853564 19853582 CTCATCCTTCCTCTTGGGC 59 NA Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 1 2 2 80 3L 20021261 20021282 TCCTTAAAGATGTACCAAGCCA 59 20021147 20021222 TGAAGAGCTTCATTTGAGCAG 59 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302716 1 1 5 188 3L 20183911 20183929 CTTCATCCATGATCAGGCG 58 20151752 20183760 AGACTCTTCGATTTCAGCTG 57 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 1 3 4 104 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254039 20254057 GGTTCTGGAAGATCTGCCA 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 3 4 4 82 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508473 20508551 TCAACCATAGCCCGAATCC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 1 2 2 82 3L 20835436 20835507 AACATGTTAGAGCCGTGCT 59 20835553 20835571 CAACTACAGTGGAGCTCCA 59 NA Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058 3 1 2 80 3L 21567367 21567853 AACAGAATGGGATTCCTGG 57 21567896 21567915 GAAACTTTCCGAGTTTGCAG 58 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 3 2 2 121 3L 21675715 21675790 TACAAGAAGCTCGTTCAGCA 59 21675874 21675892 ATACCCTCGCCTAATTGGC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 1 3 5 131 3L 21914316 21914334 TGATCCGGATCTCCAACTG 58 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112567 3 1 2 80 3R 321462 321483 CAAGTTGTAGATTTGCTCAACG 58 321152 321422 TGTCTCCACCTTGTAAACGT 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 2 3 5 123 3R 454060 455857 CCTAATGGACAGACTGGCC 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 6 10 105 3R 569891 570196 CGATATGGATACTCAACTGAAATCC 59 569810 569830 CTCTAACTCCGATCGATCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 1 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0078755 1 1 4 94 3R 1385908 1386509 GAGGAACCTCTATGACCCG 59 1385832 1385850 TACCCTGGTAAATGCGCTC 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 1 3 3 80 3R 1468681 1468759 GGGACATCACACTGTTTCAC 59 1468620 1468638 GAACTAGCGACGACATGGA 59 NA Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730 1 1 2 91 3R 1484426 1485274 GCTGGCGATAAATTAATGATGC 58 1484356 1484374 AACTCCTCCAGTTCACGTC 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 3 2 2 99 3R 1662757 1662831 TTTAATTGGTATCGCAACGGG 59 1662891 1662910 GAACAATGTGCCTAGACTGC 59 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 2 2 2 80 3R 2579786 2579807 CCTTCCGAGGTTAAATACAGTG 58 2579663 2579682 ATTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 3 2 2 80 3R 3670933 3670951 TTTGATAGCCACCATCAGG 57 3670995 3671116 TTTGGATTGAGCAGGTAGG 57 NA Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 3 2 2 98 3R 4478508 4478526 GATATCCGGCGATAGTCGT 58 4478374 4478392 CTGTAACGATTCCCAGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0112823 2 2 8 102 3R 4668549 4690516 GAATTCTTTGGTGATCGAACCA 59 4668468 4668486 GATTATCACGTCCACCGGA 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0089784,FBtr0112822 3 3 8 82 3R 4660660 4664121 AGTCTAAGGTACCCTACGAC 57 4660597 4660616 GTAGATGCTGTACTTGCTGG 58 NA Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 1 1 1 60 3R 5645367 5645388 GTGTACAATGTCATCATGTGCT 59 5645264 5645282 TATAGTCTCCGGGTCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 3 9 9 81 3R 5845282 5845303 AGTTTATTCCCGAACTCAAGGA 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082459 3 1 2 136 3R 7412204 7412225 CCATTTACCATCTAACGTGTCC 59 7411177 7412107 GAAGCAGTGGTGCTTTGTC 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272 2 1 2 80 3R 7797683 7797701 GACATGGTTAAGACGCGAC 59 7797743 7797818 AGGCAATAGAGTTATGCTGGT 59 NA Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 2 2 2 180 3R 8175698 8175928 AAGCTAGCCAACCAAATCC 58 8175536 8175555 CTTTAACGTATCCACTGCCA 58 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 2 3 3 175 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450611 8450690 GGTTCTCATAGTTGCCCTG 57 NA Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 1 1 1 66 3R 8462368 8462386 CGTGGTAAAGATTACCGCA 58 8462470 8462488 CTGAGTAGCCGTACTTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 2 2 6 153 3R 8522010 8522183 ATAGTCATGCAGGTCCTGTC 59 8522297 8522317 TGAACAGATTGATCATGGTCG 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 1 2 5 149 3R 9582375 9582913 TCAGATCAGGAATCGCCTG 59 9583026 9583044 TTGACCATGTTGTCCACCA 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 2 3 5 80 3R 9582738 9582911 CATGATGTGCAGAATCGCC 59 9582953 9582973 CTGCTTCAAGTAGTCCAAACG 59 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959 1 1 3 60 3R 10422706 10422727 ATATCGAAATGGAGACGTTCTG 58 10430154 10430173 GATCCACTCGTGTTGTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082988 2 1 3 120 3R 10568204 10568222 GGAACTTTAGCTCGCTACC 58 10568306 10613789 AAGCCTTCATTCTTGTGGC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 1 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 1 3 7 94 3R 10651023 10651041 CTGTTTCCGAGGATTCTGG 57 10650886 10650965 TTTCTTTGTGGGCTGAGTG 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 3 2 10 97 3R 11001975 11001993 TACTTGAGGGACAAGCCAC 59 11001576 11001917 ACTCTTATAGCCTTGTTGAGCT 59 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052 2 1 2 192 3R 11051629 11051698 CGATAATGCAGCGGAATCC 59 11051854 11051872 ACGATGTACCGAGTAGTCC 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 2 2 13 121 3R 11127370 11127391 GAGACGCAAATCAAAGTATTGG 58 11128939 11129375 TTGAGCAGGTCATCTTCGA 58 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 2 1 1 135 3R 11310033 11310052 CCCATTGTGTACGGATTGAG 58 11310218 11310236 CCTGCGATTCGCTAATCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 4 5 196 3R 11723423 11723506 GGAGCTAAGTGGAAATGCT 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216 3 1 3 126 3R 11826496 11827480 CCTAGAAGATTGAGCGCCT 59 11827570 11827588 TATAGTACAGGCCGCATGC 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110974,FBtr0083229,FBtr0083231 1 3 6 112 3R 11922943 11922961 TAGCATCTGTGATGACGCA 59 11922787 11922867 AAAGCGATTCTTGAGCCCT 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 2 5 5 80 3R 12755406 12755424 ATGCGTATGTTTCCAAGCA 58 12755287 12755364 GGAACCATATCTTGACCTGTC 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 1 5 5 80 3R 12755406 12755425 AATGCGTATGTTTCCAAGCA 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 3 2 2 103 3R 13224494 13224750 CGTGATGAAGGCATCAAGC 59 13224409 13224431 CTGTACAGATAAAGTTCCGTGAG 59 NA Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 1 1 1 97 3R 13559442 13559460 TGAATGGCAAGCTGTTTCC 59 13559603 13559621 CTCCAGTTCGTGGTAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7215 FBgn0038571 FBtr0300247,FBtr0100283 2 2 2 60 3R 13992652 13992672 CGTCATATCCCAACATCAAGG 58 13992612 13992631 AAACAGGGCTTTATCACCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 1 2 7 259 3R 14000713 14000731 TATTCTACACGCCACCCAC 59 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 2 3 7 83 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997308 13997326 TGATGTTCAGGACCTTGCT 59 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 2 5 5 113 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132726 14133185 GATACAGGATGGGACTGGC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 2 3 14 91 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261498 14340778 TGGTCAGTGTTGTACCTAGG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 3 4 4 98 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981432 14981451 CAGTCAAGCACCTTGTTCAC 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110917 3 1 8 82 3R 15287175 15302853 GTGAAGACAATGGATGAAAGAC 57 15302893 15302914 CACTGGGTATCGATAAGATGTG 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918 1 1 8 80 3R 15302747 15302853 CTTGGCTCGAGATGAAAGAC 58 15302893 15302914 CACTGGGTATCGATAAGATGTG 58 NA Drosophila melanogaster 61 bnl FBgn0014135 FBtr0083795 2 1 2 80 3R 15621985 15622003 GAGGACTCAAGTTCCGAGG 59 15620046 15621941 CTGCAGACACAGGAAATCG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 1 4 8 83 3R 16144000 16144712 CCTACAAAGAATCGCAAATTGG 58 16145293 16145311 TTGAGTTTAGCGGCATCAG 58 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 2 3 3 60 3R 16379031 16379310 CTTAAGCGGGAATACTATGAAGTG 59 16378994 16379014 CCAGCGAGACTAGAGTATTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 1 2 2 80 3R 16434820 16434841 CGTTTCGATACTCTCCAATGTC 59 16434881 16434964 GTGAAGTCCTTGGTGTTCTC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 1 3 3 80 3R 17447412 17448545 TTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 2 2 2 216 3R 17863397 17863415 TTGTGCAGTACGATCCTCC 59 17863595 17863692 ATCAGTTTCTCCAGCTGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 1 4 4 80 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556384 19556402 GTTATTCTGTAGGCGCAGC 59 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 3 3 3 119 3R 19633220 19633303 ATTCACAATCTCACCAGCG 58 19633119 19633138 GATCTTGAAGAGCTTTCGCT 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0084509 3 1 4 119 3R 19817859 19817877 CTGGAGCCCTACATGAGTC 59 19817587 19817779 ATCGCTAATGATTGAGTTGGAC 59 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504 1 1 2 80 3R 19821992 19822842 TACTAGTGCCCTACGATGC 58 19822884 19822904 CTACAATCAAAGCCCAATGGG 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084558 2 1 4 97 3R 20047638 20048078 GCTACTATGTGTTAATATGTCGGG 59 20048133 20048152 TTTCTTTGAATTGCGCACGA 59 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0084603 2 1 2 109 3R 20132598 20133929 CTCATCGGGTTACAACTGTC 58 20134000 20134019 AAGTTCCTCCATTGAGACAC 57 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 1 2 2 84 3R 20196182 20196200 CATCTGTGATAGCAAGCGC 59 20196244 20196327 GGTTGGTAGTGTAAACACAAGTC 59 NA Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 3 1 1 86 3R 20219026 20219044 AAGGATACCATTAAGCGGC 57 20219155 20219173 CGAACGACCATTGAAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 1 2 2 80 3R 20378684 20378702 AGAAAGACGAGAACCTGGG 59 20380118 20380196 AGGTGAGCCAACTATCCAC 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865 2 2 3 154 3R 20677423 20677568 GAGCAACTATTGCTCAAGGAG 59 20677730 20677754 CTCGACGTTTATTAGATGTAGTACG 59 NA Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 2 2 2 93 3R 20890642 20890660 CGAATAATACCTGGAGGCG 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 3 3 5 199 3R 21507901 21507920 CATGATCAGTGCCAGTATCG 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 3 2 5 146 3R 21711422 21711441 ATGCTGCTGATAGTCTACGG 59 21711547 21711618 CGCTGTGAAATACAGATTTGGT 59 NA Drosophila melanogaster 61 Dak1 FBgn0028833 FBtr0299798 3 1 2 60 3R 21882118 21882139 GGATGATGACGATATGGAACAG 58 21882019 21882038 CGCGGTTTCTATGATTTCCA 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 2 1 1 86 3R 21885412 21885430 AAAGGGCGAAACAATACCG 58 21885533 21885552 TTACTACCATACTCCACGCC 59 NA DesignNoJunction Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 3 2 10 88 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424360 22424379 TTGATCACATCTTGTGCCTC 58 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085039 2 1 3 145 3R 22543735 22544055 TAAGTGGGAGAACTCCTCAG 58 22544163 22544181 TGGGATCTAGTATTCCGGG 57 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 3 3 9 96 3R 22699711 22699801 ACAGCTACCCATATACGGG 58 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 2 5 5 80 3R 22809871 22809890 CCCAGTATGCCTATGGAAGG 59 22809931 22810009 ACTTAAAGATTTGGCTCTCGC 59 NA Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 1 1 1 60 3R 23305499 23305519 GGATCTAAAGTACCTCGACCA 58 23305598 23305618 CGGTACAATGGTATAATGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 2 1 1 60 3R 23305495 23305517 TCAAGGATCTAAAGTACCTCGAC 59 23305593 23305614 ACAATGGTATAATGGCGTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 2 1 1 83 3R 23410056 23410075 GAAATCAGTCGGATGGATCG 58 23410379 23410397 TGATCAGGTCCAACTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 2 3 3 109 3R 24168518 24168608 ACGAGATACCAGAGGTATCGA 59 24168679 24168697 ATCTTTGCCTCGATCACGA 59 NA InUTR Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303 3 1 2 94 3R 24313704 24313722 CAGATGCCGAGGTAGAAGG 59 24313778 24314484 AAATTTGCTTCGTCTGGATCG 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 1 2 4 80 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350957 24350975 GTGTCGTAGTACCAGCTGG 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839 1 1 4 80 3R 24351024 24351605 GGCGTGCTTAAAGCTAAGG 59 24350962 24350981 GTAGTACCAGCTGGTAACGT 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 3 5 6 83 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639721 24640881 GCGCTCAAACACCTTATAGC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 3 2 4 87 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698011 24698247 CGTCAACTTCAACCTGCAG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085377,FBtr0301651,FBtr0301650 2 3 10 99 3R 24959596 24959614 TAAACCAAACGACCGAGTC 57 24959677 24960290 TTCTCCATGTAACCGAGCT 58 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 3 4 4 86 3R 25325968 25326048 CTGCTATCAGGAAATGTATTCCG 59 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475,FBtr0085474 2 2 2 227 3R 25566675 25566754 CATAACTGTGCTGTGCGTG 59 25567004 25567022 CTCATCGTAGCGAATCGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 1 2 2 127 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763337 25763356 GTATTCATCCGTGTTCCTGG 58 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085693 2 1 4 80 3R 26275673 26279161 GATAAGGATGAGTCTCCGTCG 59 26275613 26275632 GATGGATGCGTACTTCAGGA 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 3 10 12 116 3R 26398690 26398708 ACCTGGTGGAGAAGAACTC 58 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 8 13 154 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419562 26420548 AGTAGAGTTTCTGGTCGGT 57 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 2 4 4 117 3R 26650595 26650683 AGTTCCTATGACTGGTAACCT 58 26650762 26650780 ACCTGAAAGCATCTTGCTG 58 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742 2 1 3 104 3R 26884331 26886799 CAACCCTTCGAATACAAAGC 57 26883635 26884264 GATTTGCGTTGCCTTTCTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0112864 1 1 22 105 3R 27707589 27747368 AACTGAACTATTTGCGCGG 59 27707502 27707520 AGTTTGGCCTTCTTTGTGG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 1 2 6 97 4 350954 363555 AAACACAAGTAATAGGCGGC 59 350034 350052 GAATGCGTTTACCACTCGT 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 3 5 5 81 4 1230676 1230694 CCAAGTAGCTCAAGTGGCT 59 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 2 2 8 80 X 165641 167228 GGGCAACAGCAATTACACC 59 165579 165599 TTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 2 8 8 86 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396250 396334 CACTCATTGTGAGCCAAGG 58 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 2 4 4 87 X 423499 423517 AGTTCGCCAAGAACTTGGA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 2 3 3 82 X 1270211 1270739 GTTGTACCAGGTCATATCGAC 58 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 2 2 2 82 X 1753950 1753974 GTTAACATTGAGTATGAACTGGAGG 59 1753835 1753910 TGCACATTCATTGGCAAGG 59 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 2 3 3 103 X 2236290 2236308 GAAACACAATCGTCCCAGG 58 2236375 2236461 CCTCCGCCAGAATATTCCA 59 NA Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463 1 1 3 166 X 2277625 2278280 CCATTTAAACTCAGTTCCCGT 58 2275928 2275947 GCACTAACTCATTCAGTGGA 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 3 1 1 61 X 2842143 2842161 CAGTGGGAGTACTAGCTGG 58 2842255 2842273 ACGACCAATTCCTGATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 1 3 3 81 X 4345063 4372194 TGTAAGTACTACGATCCTGAACTC 59 4372233 4372252 CAGCTTCAGGATGTCATTGG 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 89 X 4844925 4845008 GGAGGATTTAAGCTCTCCCA 58 4845060 4845078 TTGGAACTGGCTTGAACCT 59 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301084 3 1 2 193 X 5601290 5601310 ATAATGTCAGCTACCAGGGTG 59 5601527 5601605 AATCGCAACCAACTTGCAG 59 NA Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 3 2 2 118 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962706 5963100 TCTTTGGGCTTCTGAATAAAGG 58 NA InUTR Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 2 2 2 73 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002261 7002279 TGATTGCCTACGAAACAGG 57 NA DesignNoJunction Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 2 2 2 275 X 8375954 8375972 GATCGACCTACATTTGGGC 58 8376437 8376455 GAATGTTCTGGTCGGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271,FBtr0071270 2 2 10 80 X 8770360 8770380 CATTTAGAGACGAGCGAAGAG 58 8769882 8770072 CTGGTTCATCACCCATGTC 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352 3 1 5 112 X 8992432 8993354 TATGCTAGATCAGGACAAGATCC 59 8992342 8992361 TGAGAAAGTCCTTCAGGCTG 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0071402,FBtr0302723 2 2 3 80 X 9575212 9575314 GCAAATGACTCAACTCAACAG 58 9575152 9575171 TGTTGCTGAGGATTGTTACC 58 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585 3 2 4 81 X 10120042 10120555 CTACTGAGTTCGGATAATGCC 58 10120598 10120616 TCTTCCACGACGAGATCAG 58 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 3 3 3 82 X 10373677 10373695 CCTGAAGTACTTGTTCCGC 58 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 3 1 1 82 X 11022926 11022944 GGTAACAGTTTCGCCTCCT 59 11022794 11022812 TCGTAGTACTTGGCCTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 3 5 5 157 X 11027710 11028925 CCATGGTATACAAATACACAGCC 59 11027575 11027593 GTAGATGCCGTTCTTGCAG 59 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073499 2 1 2 85 X 11351723 11351741 CGGCAACGACATACTACTC 58 11351790 11352273 AAAGTTGGGTTCGGATAGC 57 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 3 3 3 81 X 11498696 11498778 ATACATTTCCAGGACGATCCC 59 11498821 11498839 TGTAGATGAACAGGGTGGC 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 3 6 6 174 X 11688876 11688897 CAATGGTTAAGACCTATTGCCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 3 4 10 85 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848300 11856056 GTTGATTGAGTTCGACCCG 59 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073662 1 1 3 168 X 12467836 12475612 CAAAGCAGAGCACATGTCTC 59 12467372 12467390 TACTTCGGAGCTGGTAACG 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 83 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268334 TATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 83 X 13268113 13268132 CATTCAACCGTTAGACGTCC 59 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 mud FBgn0002873 FBtr0073906 3 1 3 109 X 14150124 14150526 AGATCTCAAAGACGGACCC 58 14150599 14150617 CAGGTCGTTTGTAGTGGGT 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 2 3 3 69 X 15276615 15276633 GAACAACATACCCGGATCG 58 15276374 15276582 ATGAAAGCTGGGAAACTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089293 1 1 2 97 X 15284522 15284607 TGTTTATGCGAGGTGACTC 57 15284443 15284461 ATGATGACGACTAGGACCC 58 NA Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089293 2 1 2 103 X 15284935 15286415 CAACGGATTGAAGGCTTCC 59 15284850 15284868 AACTTGGAGTGCATCTCGT 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 2 2 2 113 X 15743034 15743176 GGAATTACCTACATCCAATACTCC 58 15742944 15742962 AGTGAACTTCACATGGCTC 57 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299535 2 1 3 85 X 15843021 15843565 CAGATAGCGAGAGTGATGAC 57 15842955 15842973 CAATACCACGACGGATACC 57 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951 1 1 3 105 X 15997076 15998846 GTTTGTTTAGTCTGACTGGGA 58 15996991 15997009 TGTACTCGCCACAGTACTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 1 2 2 80 X 16168526 16168607 AGTGCTTTATGTCTCTGACG 57 16168465 16168485 CGGAGTAGACAAAGTTATCCT 57 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 1 3 3 102 X 16532325 16532446 CTTCTTGAAGAAGACTGGCA 57 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352 3 1 4 131 X 16651142 16654375 GGTATTGGCAAGGTATGGC 58 16651029 16651047 CATCGAAATCACCGGTGAC 59 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 2 2 2 147 X 16828339 16828357 CCTATTTGACGCAGGTTGG 58 16828468 16828910 CTGGAGAGGACCAAACTGG 59 NA Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388 2 1 2 156 X 17087055 17087936 CAACACCAGATTAGTCGCC 58 17088056 17088074 AGTAACTGCTCATGGGACG 59 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0074491 3 1 3 98 X 17461883 17461901 TACACATTCTCCTCCTGCA 58 17461728 17461821 AGGCACATTAGGTATGGGT 58 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 3 3 3 80 X 17536259 17536345 TTCGAAGAGGATACCAATACTG 57 17536200 17536218 GAAGAAGTCCTTCAGTGCC 58 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302835,FBtr0302837 3 2 5 81 X 17615639 17630243 AGTGAACTAGGTGAGTACAAGTC 59 17630282 17630302 CTTCATTCAGCGATGTATCGT 58 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 3 3 4 178 X 17767427 17771467 GAATAAACAGAAACTGTCCGC 58 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 3 8 8 84 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844724 17844743 GAATGATGGCGATTATGTCG 57 NA Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 2 2 2 80 X 17974380 17974456 TCACAGTCCGAACTATGCC 59 17974318 17974337 TAGCAAGAGGACACAATCGA 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 3 2 7 80 X 18004586 18004604 AACGCGTATACAGTTTGGA 57 18000952 18004543 TGAGATCGTTGATCTCTTGG 57 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 1 2 2 87 X 19019674 19020053 TACAATCCGAGATCGTGCA 58 19019605 19019623 AGTCGTACACGTACAGCTG 59 NA InUTR Drosophila melanogaster 61 pcm FBgn0020261 FBtr0074784 2 1 2 156 X 19380365 19380449 CTTGAAATTAAGCCGGCTG 57 19380159 19380179 GCAGTATGTATTCCAAGTCGA 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 2 6 6 153 X 19417822 19417840 CACAAACACGATCTGGAGC 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302863 3 1 6 80 X 19418182 19420880 GATAACGATGACAAGAAAGGGC 59 19420921 19420939 GCTGTTGTTGGTTGAGGTC 59 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 1 4 5 80 X 19905588 19920751 CTGTCTACTTTCTGGTAAATGGAG 59 19905531 19905550 AGCATATCACATCCATGGCT 59 NA Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 2 1 1 193 X 20606912 20606931 GAACAAAGTCAAGGCTTCAC 57 20606675 20606693 TAAGCAGGATCAGTGTCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251 2 2 4 149 X 20988419 20988489 CATCACATCACTCGTAAATACCAG 59 20988596 20988615 ATCTTCGGAGTAGTAGGGCT 59 NA Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 2 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 tRNA:CR31914 FBgn0051914 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:56EFa FBgn0011869 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-8 FBgn0046815 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-276a FBgn0067718 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-315 FBgn0067689 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:291 FBgn0065070 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113717,FBtr0302542 1 2 3 80 XHet 71078 71099 CATTATTAGCGTCAGGATATGC 57 69218 71037 TAGTATCGTCGGATCTGGG 57 NA Nonspecific Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070635 3 1 2 91 X 3756107 3756125 GAGGCTACATTCTTGCCAC 58 3755964 3756056 CACACTCTAGCTAATTTCACGAG 59 NA Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111191,FBtr0111192 3 2 2 70 X 22415483 22415501 TCGATTCGGGTGCTATTCC 59 22415672 22415690 TGATGCCCTCCAAGTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1314 FBgn0031134 FBtr0077286 2 1 1 60 X 20739295 20739314 CATCGAAATAGAACTTGCGG 57 20739254 20739275 GTTCCCAATAAATACCTCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or19a FBgn0041626 FBtr0070029 1 1 1 80 X 20036018 20036036 TGCCAGATTCCAATGATCC 57 20035903 20035974 CGCTCCCTTAATCATCACC 58 NA Nonspecific Drosophila melanogaster 61 CG32821 FBgn0052821 FBtr0070037 2 1 1 60 X 19804645 19804663 AGACTCAAACGACTCCACC 59 19804505 19804524 TAGAAGACTCCATTGCCACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074817 2 1 3 116 X 19635188 19638303 ACAACAAAGCGACAAATCGT 59 19635091 19635109 TACGACTGGTAGCAGTAGC 58 NA InUTR Drosophila melanogaster 61 CG12531 FBgn0031064 FBtr0074788 1 1 1 80 X 19617378 19617396 TCATATGTGGCGGTTGGAG 59 19617434 19617527 GGCACTTGTTCCTATTAGATATTCC 59 NA Drosophila melanogaster 61 CG14216 FBgn0031054 FBtr0074747 1 1 1 97 X 19558891 19558973 CAAGGACAAGGAGTTCTACAC 58 19559032 19559050 CTTTGGTGTCCTGAAACCG 59 NA Drosophila melanogaster 61 CG32544 FBgn0052544 FBtr0074644 2 1 1 161 X 18754364 18754382 GGAGAACACCAGCTACGAG 59 18754558 18754576 CTCTCGTCTTGTTGCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 phm FBgn0004959 FBtr0074603 2 1 1 68 X 18580369 18580473 TGGATTTGGCATCATCTGC 58 18580505 18580523 AGCCAATCGATAGTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 1 2 2 80 X 17990585 17990604 AAAGACTGATTCGTTCGCTG 59 17990641 17990734 CCTTGGTTATTCTATTGAAGTGACC 59 NA Drosophila melanogaster 61 Dhc16F FBgn0013809 FBtr0074509 1 1 1 80 X 17959720 17959796 AAGACGATATTTCGAGCCTG 57 17959837 17959857 CGATGGATAGTAGTTGACCTC 57 NA Drosophila melanogaster 61 e(y)1 FBgn0000617 FBtr0074463 3 1 1 80 X 17736378 17736396 GAAGGAGCTGAATGTCCAG 57 17736440 17736522 ATGCAGGTTACATAGCGGA 58 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 2 2 2 114 X 17595800 17596243 CATGAGTTCGCAATACTCGA 58 17595705 17595723 GATTAGCACCTTGATGCCT 57 NA InUTR Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 1 3 3 80 X 17542201 17542219 CTCAATTACCGAATCGCCA 58 17541816 17542158 GTACACGCAAATAAGACCAC 57 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302377,FBtr0302376,FBtr0074386 1 4 4 75 X 17028864 17028884 ACTCTGATAAATCGGAGAGGA 57 17028986 17029006 AGATGATCCAGATACACCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 mei-41 FBgn0004367 FBtr0074271 3 1 1 102 X 16286005 16286083 AATCTCCAGATAGCAGCGAG 59 16286148 16286166 ACATAGGCCAGTACAAGGC 59 NA Drosophila melanogaster 61 CG15914 FBgn0030700 FBtr0074105 3 1 1 85 X 15747911 15747982 ATACTCTCCTGTCTTGCCG 58 15748028 15748049 AGAAAGGGCTGAACATTATCCA 59 NA Drosophila melanogaster 61 CG8565 FBgn0030697 FBtr0074103 1 1 1 80 X 15733461 15733479 TTCGGACCGAGATCAAGAC 59 15733523 15733597 TGGTCATCTTGGAGCTAGG 58 NA Drosophila melanogaster 61 CG8509 FBgn0030696 FBtr0074098 3 1 1 60 X 15704853 15704872 ATGAGAACGATCCAAACTCC 57 15704893 15704913 GAATCACGTCCTTTAACTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6324 FBgn0030647 FBtr0074037 3 1 1 85 X 15374494 15374513 ATCGGAGATGCAAGAGATGG 59 15374560 15374676 CCTCTCCAGACTGATTCTCG 59 NA Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075 1 1 2 94 X 15365289 15365416 GCTTAAGTGACTGGTCGGA 59 15365213 15365231 CATTTCCAAGAGGCTTCGC 59 NA Drosophila melanogaster 61 rut FBgn0003301 FBtr0073992 1 1 1 80 X 14689612 14689696 GGACAAGTGAATGTGTTTACGT 59 14689553 14689572 ATGAGAGTCGTTCTGGAAGG 59 NA Drosophila melanogaster 61 mRNA-capping-enzyme FBgn0030556 FBtr0073922 2 1 1 83 X 14136465 14136483 CTTTCACGACAAGATGCCC 59 14136336 14136418 CCCAGTTTCACCTTTAGCG 58 NA Drosophila melanogaster 61 CG11095 FBgn0030528 FBtr0073827 1 1 1 182 X 13705907 13705925 ATGTCGACCAGTCGATCAC 59 13706071 13706155 ATATTTCATTCGTGCCGCG 59 NA Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 3 2 2 91 X 13644350 13644368 ATAAACAATGTGCCATCGC 57 13640810 13640828 TAATCACGCATGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301451,FBtr0301450,FBtr0301449,FBtr0112980 3 5 5 104 X 13549142 13549160 AACGAGAAGAAGGTCGACG 59 13549226 13549344 ATTGCGTTCCTTCAAGATTCC 59 NA Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 1 1 1 287 X 13450737 13450861 TGACAAACGCCAATTGACC 59 13451112 13451130 TTGATCAAATTGGGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr12A FBgn0030494 FBtr0073784 2 1 1 89 X 13438039 13438058 ACTATGCCTATCGGATGACC 58 13438110 13438535 GCGTGATCGACTGATTCTG 58 NA Drosophila melanogaster 61 CG1622 FBgn0030468 FBtr0073757 1 1 1 83 X 13192777 13192797 CTTTACGACTGGTATGAGGAC 58 13192842 13192943 TCCGATGGTTAAGACCTGG 58 NA Drosophila melanogaster 61 Fer3HCH FBgn0030449 FBtr0073745 1 1 1 64 X 13002025 13002045 AACGATCAGATCAACATGGAG 58 13001919 13001999 TCGAAATGGTAGGCCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073696,FBtr0073695 2 2 2 245 X 12796460 12796478 GTTGGTTCAGTACGAGGGT 59 12795769 12795787 TCGTACAGGCTGCAATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1578 FBgn0030336 FBtr0073607 2 1 1 80 X 11704487 11704575 ATCGATTCGATTATGAGGAGAC 57 11704428 11704448 TGTTCTCGTAATTCCATCGTC 58 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0090002,FBtr0301501 3 3 3 80 X 11592460 11592544 ATATTTCAGAGGATCCCAAGG 57 11592583 11592604 ATACTTCCTTGACGGTTATACG 57 NA Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 2 2 2 80 X 11450136 11450227 TCTTCGAGCTGATCATTGGT 59 11450075 11450095 GGCCATAGAAGTATCTGTGGT 59 NA Drosophila melanogaster 61 CG11106 FBgn0030280 FBtr0073446 3 1 1 68 X 11096612 11096630 CTGTCCTCAATTCCGGGAG 59 11096661 11096680 ATATCCATGCCGTTGTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15202 FBgn0030271 FBtr0073438 3 1 1 83 X 11036796 11037103 AGTGCATCCAGACTATCCTG 59 11037148 11037167 TTGATGGGCTTGTAGGACTG 59 NA Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429 3 1 3 185 X 10986741 10986821 CTCGTATTTCGCTTCGTCC 58 10987087 10987105 AGGGATTCTTCAGGTAGCG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG2076 FBgn0030263 FBtr0073428 3 1 1 97 X 10985808 10985826 CTGCTCTATGACACTCAGC 57 10985887 10985968 TAGATCGACATTGAGGCGT 58 NA Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 3 2 2 226 X 10947215 10947383 AATAGTGTGCTGCGAACCT 59 10946792 10946811 TTCAGGTTGCAATAAACCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 3 1 1 74 X 10733432 10733452 TGCTCAAAGGATTTGGATGAC 59 10733488 10733563 GATTGTTGATGTGGTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 2 2 2 93 X 10644116 10644196 GTCAAGATCCAACTCAAGCC 59 10644042 10644060 ACTCCTCGTTGTAGATGGG 58 NA Drosophila melanogaster 61 CG2111 FBgn0030223 FBtr0071492 3 1 1 94 X 10554303 10554321 CATTCAAGGCTGTGGTCTC 58 10554379 10554452 GTTGCTGCAATAATTGCGT 58 NA Drosophila melanogaster 61 CG15295 FBgn0030220 FBtr0071508 3 1 1 66 X 10512442 10512460 AGTAGCGGTAATCCAGCAG 59 10512394 10512412 CGAAAGCACTGAAGTCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Neb-cGP FBgn0083167 FBtr0071449 1 1 1 197 X 10354994 10355012 ATCTTCAATGGCACCACCA 59 10355258 10355276 TAAACTGATCCGCAGTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302153 1 1 2 80 X 9259961 9259980 AGGATCTACATCTGCGATGG 59 9259826 9259918 CTTACGGTCATTGCACTGG 58 NA Drosophila melanogaster 61 c12.1 FBgn0040235 FBtr0071324 1 1 1 66 X 9213064 9213082 CACTGAGCAAGCAGTACTC 58 9212953 9213035 CCAGTCTCCCTGTATTTCAG 57 NA DesignRelaxed Drosophila melanogaster 61 Gr8a FBgn0030108 FBtr0071311 1 1 1 117 X 9122274 9122292 ATATACGCTTCGCAGAGCT 59 9122373 9122450 AGTTCTGAATCTGCAGGGA 58 NA Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0071284 1 1 2 90 X 8975103 8975209 GGATGGTAGAAAGGTTTCAGC 59 8975261 8975279 ATGGCAACTCCATGGTCTC 59 NA InUTR Drosophila melanogaster 61 CG1885 FBgn0030066 FBtr0071268 1 1 1 60 X 8793999 8794019 GGAGAAGCACGATTTCAATCC 59 8793959 8793980 GAGATTCTTGAAGCCGAAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ogg1 FBgn0027864 FBtr0071223 2 1 1 81 X 8585512 8585533 CAAGAAGATTTACGAAGAGGTC 57 8585574 8585652 AAAGAGAATAGCTTGAGCCC 57 NA Drosophila melanogaster 61 CG11368 FBgn0040923 FBtr0071058 3 1 1 175 X 7346292 7346311 TCATTGGTCTGCTACTGGTG 59 7346523 7346541 TTAACCGGTAGATGCAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32733 FBgn0052733 FBtr0071001 2 1 1 60 X 6846781 6846800 GTTACCTCACTGATGCTGGA 59 6846823 6846841 CAGATCCAGCCTGATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0300177 3 1 2 86 X 6745078 6745346 CTTTGTGCTCAGTTACAATTGG 58 6745392 6745411 CCAATTAGGCTGATGGACAG 58 NA Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 1 2 2 80 X 6160489 6160508 CTACAAGGACCTCATATGGC 57 6153746 6160446 GATATCCAGAAACGCTCCA 57 NA Drosophila melanogaster 61 CG3108 FBgn0029807 FBtr0070833 2 1 1 187 X 5673527 5673545 AACTATGTCAACGCCTCGT 59 5673284 5673378 AGTTGGCCATCATATTTGGAC 58 NA Drosophila melanogaster 61 CG17764 FBgn0029751 FBtr0070757 3 1 1 60 X 5200878 5200896 AGGATAGCGAGGATGATGC 59 5200836 5200856 ATTGTCTGACTGAAGATGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 2 4 4 98 X 3845593 3845679 GGTGGAGATCTGCCTTCAG 59 3845741 3845759 AGATCAGCATCCATGGGTG 59 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 1 1 1 108 X 3783470 3783488 AAGTTTGGACCGGAAGGAG 59 3783560 3783726 CAGCGGCAAATCCAAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 2 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32779 FBgn0052779 FBtr0070601 2 1 1 156 X 3697168 3697186 GAATGTCAGTCCTGGTCAG 57 3697306 3697324 CCACGAGAGGTTCTTATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng4 FBgn0010296 FBtr0070538 1 1 1 60 X 3138143 3138165 TTATAAGGTCGAGGACTTTACGG 59 3138105 3138126 GGGATGATAGTCAATGCTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4116 FBgn0029649 FBtr0070561 3 1 1 61 X 2961288 2961309 CTTCAAACACCGGTATCAACTC 59 2961248 2961268 CAGCATATCCTGCTTATTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14418 FBgn0040354 FBtr0070565 2 1 1 234 X 2777631 2777649 ATTCGGGATGATCCTGGTC 59 2777331 2777349 TTTGGTGATGAAACCGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2685 FBgn0024998 FBtr0070499 3 1 1 85 X 2607295 2607379 AATGCGACTCTATCACAATGAC 59 2607231 2607249 TCTTCAGGCGCTTCTTCTC 59 NA Drosophila melanogaster 61 Klp3A FBgn0011606 FBtr0070448 1 1 1 80 X 2494440 2494460 AACGAGACAGTGGTACTAAGC 59 2494297 2494402 GGATTGAATCCTCTTGGATTTCG 59 NA Drosophila melanogaster 61 CG33218 FBgn0053218 FBtr0070400 2 1 1 85 X 2224315 2224333 CGAGATCCGTTTCTATGGC 58 2224382 2224457 TTTCTTGATGCTCTGCAGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14050 FBgn0040392 FBtr0070407 3 1 1 95 X 2219333 2219437 CTTTCATTACCGAGGACGAC 58 2219257 2219277 TGTTCTTGTTATCTACGTCCC 57 NA Drosophila melanogaster 61 Hr4 FBgn0023546 FBtr0100515 2 1 1 60 X 1896373 1896497 CCCACATACCAGAGATCCA 58 1896519 1896539 ACATAGAACATCTTGCTCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454,FBtr0070308 2 2 2 111 X 1760520 1760607 TAGCAAAGGGCTATATGTTCC 57 1760680 1760698 CTTTGTGAGATTGGCTCGT 58 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815,FBtr0089814 2 2 2 80 X 1579732 1579750 CTACTACGTGGGCTCATCG 59 1578769 1579691 GTATATCCATCCATCGACACCT 59 NA Drosophila melanogaster 61 hfw FBgn0001189 FBtr0070270 1 1 1 80 X 1566316 1566401 AATTCGCTGAGCAAGATTCC 59 1566444 1566462 TGCCAGGTAAATACGACGG 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301844,FBtr0301842 2 6 6 116 X 1385476 1385494 TGAGCCCTTTATGGAGACC 58 1385281 1385396 ACTATACCCACCAGCATCC 58 NA Drosophila melanogaster 61 CG3690 FBgn0040350 FBtr0070185 1 1 1 97 X 844060 844078 AACAATCTGATTGTGGCCG 58 843916 844002 AGTCCACTGGTCATTATAAGCT 59 NA Drosophila melanogaster 61 CG3704 FBgn0040346 FBtr0070188 2 1 1 143 X 834107 834193 CTGAACAAGATCGACCTAAAGG 58 833985 834003 GTAGAAGGTGTCCAGGGTG 59 NA Drosophila melanogaster 61 CG13358 FBgn0026874 FBtr0290198 3 1 1 75 X 698030 698119 TCTTCCGTCCCAGATTTGG 59 697973 697991 ATGATTTGGGAAGAGGGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG42644 FBgn0261404 FBtr0302341 1 1 1 74 U 16057 16076 TTAAGTAACACAACGGTCCC 57 16111 16131 CCGATAATGACCCAAGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 1 2 2 80 4 604478 604568 GGATCTCCTTAGCATCCCA 58 604609 604630 AATAGGTAACGAGATCCATCAG 57 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 2 7 7 86 4 470934 471007 TATGGAGTTGGTTACTGGTG 57 471053 471074 CTTATAAGATGAGAAGCGTCCT 57 NA Drosophila melanogaster 61 CG32850 FBgn0052850 FBtr0089123 2 1 1 80 4 337121 340078 CAGCCAGTGTATCATCAGG 57 340122 340140 AGATGGTGTTAGCGTTGTC 57 NA Drosophila melanogaster 61 CG31998 FBgn0051998 FBtr0089145 3 1 1 80 4 224643 224666 CAGACACAAGTTATTCACTAGGTC 59 222265 224608 GTTGATGTGACGAGTGATATCTC 59 NA Drosophila melanogaster 61 CR33629 FBgn0053629 FBtr0091606 3 1 1 86 3R 5887629 5887647 TCTGAGTCGGACTTTGCTC 59 5887692 5887766 TAGGTTGGACAGAGTATCTTTGAG 59 NA Drosophila melanogaster 61 snRNA:U1:82Eb FBgn0004183 FBtr0078851 1 1 1 60 3R 773852 773870 ACTAGTTCTAGTTGCGCCC 59 773810 773832 GGTAAGTATGCTTTGCTTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nero FBgn0261479 FBtr0085863 2 1 1 60 3R 27573141 27573160 TTCTGAACAACAAGGAACGC 59 27573100 27573118 TTCTTCAGCGTGAAGAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 1 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 1 1 1 90 3R 27130059 27130729 CTTCAACAGAATCTGGCCG 58 27129987 27130005 ATTGCGACAGGTTGATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1340 FBgn0039797 FBtr0085699 3 1 1 93 3R 26552861 26552941 CCTACAACTTTAACCGATCCA 57 26552996 26553014 TTTCCATTGAAGTTCCGCT 57 NA Drosophila melanogaster 61 PH4alphaPV FBgn0051015 FBtr0085670 3 1 1 80 3R 26473668 26473686 ATTCAAAGCACCTATGGCC 58 26473545 26473626 AGTGAGACTCACATTGTACTG 57 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085692,FBtr0085694,FBtr0085693 2 4 4 80 3R 26274281 26274366 TCTAGTTTCGGTAACTGAGGG 59 26274221 26274240 AGTTCCATGTTGTTCAGCAG 58 NA Drosophila melanogaster 61 CG15533 FBgn0039768 FBtr0085626 1 1 1 86 3R 26256451 26256469 ACGGAAGATATGAGTCCGG 58 26256519 26256612 GTAGCGCCAGTACTTTCTC 58 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 3 2 2 101 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628320 25628339 GGATTCATCGAGTGCTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7593 FBgn0039687 FBtr0085461 1 1 1 80 3R 25550156 25550233 ACTGTGTCCTGTATTGTTACGA 59 25550097 25550118 AAGTGCTCATGATGAACTTTCC 59 NA Drosophila melanogaster 61 CG7582 FBgn0039681 FBtr0085464 2 1 1 139 3R 25506958 25506979 ACTATTGTCCTATACTTCTCGC 57 25506778 25506859 CGACGGTATTCCTTCTTGAG 58 NA Drosophila melanogaster 61 ppk19 FBgn0039679 FBtr0085451 1 1 1 107 3R 25499307 25499325 CGTTGACTTATAACCGCGA 58 25499396 25499463 GAACTCCATCAATGGGAGG 57 NA Drosophila melanogaster 61 CG11899 FBgn0014427 FBtr0085390 1 1 1 80 3R 25026280 25026384 CCGAAGAGGTACTGAAAGAG 57 25026427 25026445 GATGGGACATCTCCATGAC 57 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 1 2 2 81 3R 24671712 24678608 ATACGGAGTTGCCATCCAC 59 24678653 24678671 CACAATGTCCACGGAATCG 59 NA Drosophila melanogaster 61 wdn FBgn0005642 FBtr0085356 2 1 1 88 3R 24635846 24635864 AGAAGCACCTAAAGACGCA 59 24635716 24635794 GCTTCCCAATTTGAGGCAC 59 NA Drosophila melanogaster 61 CG9989 FBgn0039593 FBtr0085307 1 1 1 80 3R 24496943 24497012 TATCGCTACGTAAACACCGT 59 24497053 24497073 GTAGGCATTGTCAAATCCACC 59 NA Drosophila melanogaster 61 CG1894 FBgn0039585 FBtr0085290 1 1 1 82 3R 24310405 24310423 TAAAGTATCAGCCGTTGGG 57 24310469 24310568 GGCATTAGTCAATTGCAGG 57 NA Drosophila melanogaster 61 CG5491 FBgn0039459 FBtr0085061 3 1 1 62 3R 22690002 22690020 CGATCCTCTAAGTCCACGG 59 22690046 22690064 GTTGTGCTTCTCCATTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11878 FBgn0039310 FBtr0084821 3 1 1 80 3R 21100621 21100695 CGAGAGGATTCTATGCCGT 59 21100736 21100757 CAATAGAAGCATCCTCTTTGCC 59 NA Drosophila melanogaster 61 CG11786 FBgn0039264 FBtr0113282 3 1 1 81 3R 20872871 20872893 GATGATATGATGTCTGGATCTGG 58 20872929 20873017 GTTGGGCTAGTTTATCCTTATCTG 59 NA Drosophila melanogaster 61 CG13646 FBgn0039255 FBtr0084751 2 1 1 122 3R 20774537 20774555 GCCCTTCTATGTGATGCTC 58 20774641 20774795 TTGAAGGAGAGGGATTCCG 58 NA Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089439 1 1 2 235 3R 20743223 20743440 AAGGACGAAGATGGTCGTG 59 20743006 20743026 CAGATTTGAAAGGGATCCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Esp FBgn0013953 FBtr0084703 1 1 1 80 3R 20674115 20674133 CATCACAGTTGGTCTCACC 58 20674177 20674265 TACAAGCCATAGGCTACGG 59 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696,FBtr0084697 3 2 2 113 3R 20620062 20620080 GCGGCATGATAGAACATCG 59 20620154 20620326 GATGGAAATCTGTAGCAGTACG 59 NA Drosophila melanogaster 61 CG13625 FBgn0039210 FBtr0084671 1 1 1 60 3R 20410054 20410072 GAAGGAGAAGGGATTCCGA 58 20410012 20410032 CTCTGATCGGAGTTACTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13622 FBgn0039202 FBtr0289971 1 1 1 60 3R 20348694 20348712 AGGGTCAGGTTTACAGTGG 59 20348652 20348671 TGTTTGGGATACTGAACTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 2 1 1 182 3R 20219089 20219169 AACATGGGTTTCAATGGTCG 59 20219308 20219332 GTAGATTCGATCATACTGATGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 2 2 2 80 3R 20014179 20014253 TGTGGCGATATGGAGATTCTC 59 20014119 20014137 CTCCGAACTGTACTCCTCC 58 NA Drosophila melanogaster 61 CG5510 FBgn0039160 FBtr0084576 2 1 1 125 3R 19993858 19994208 CTTGAACGTAAATCACGATGAG 57 19993754 19993772 AAGAAGATCTTGGCGTTGG 58 NA Drosophila melanogaster 61 Npc2f FBgn0039154 FBtr0084548 3 1 1 80 3R 19963853 19963873 ATCAAGTCTACCAGAGATGCT 58 19963914 19965511 GTACAAAGAACCGCAATCCT 58 NA Drosophila melanogaster 61 tst FBgn0039117 FBtr0084462 1 1 1 80 3R 19596214 19596233 AACATCTGCAACCACTTGTC 59 19596089 19596174 CAACAAATTTCATGATGCGGTG 59 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 2 2 2 80 3R 19557824 19557842 TCTTGAGTCGCTTAAGGGC 59 19557701 19557782 AACTTGTTAATATCGCCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18754 FBgn0042106 FBtr0084439 2 1 1 80 3R 19511124 19511207 AATTCCCAGTGCGATACAC 57 19511249 19511269 GCAAATTCAAATCCTGTAGGG 57 NA Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 2 2 2 127 3R 19079153 19079171 AGACAGTTATGGACGTCGT 58 19079262 19079338 CGAATAGATCTTGGTGCGC 59 NA Drosophila melanogaster 61 CG4771 FBgn0039018 FBtr0084323 2 1 1 80 3R 18569136 18569154 ATGTCACCGACATACGTCC 59 18569020 18569094 CAGGCACTCCAATTAAATCCA 58 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 2 5 5 80 3R 18430300 18430377 AGCAGCTTTAAGAAGACTCC 57 18430418 18430438 CAAATACAGCACAAGATCACG 58 NA Drosophila melanogaster 61 CG5376 FBgn0038977 FBtr0084292 3 1 1 119 3R 18314346 18314415 GACTTTGAGGAAGCCAAGG 58 18314245 18314264 CTCTTGTCGTGATTTGGGAG 58 NA Drosophila melanogaster 61 PSR FBgn0038948 FBtr0084239 3 1 1 60 3R 18187550 18187570 AAGCTCCTGGATGACTATGTG 59 18187510 18187528 CGCAGTACTGGAAGAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874,FBtr0084169 2 2 2 96 3R 17821415 17821433 CCCAACCACTGTAAGACAG 57 17821491 17821577 GTGATGTTTGGTTGTTCTCAG 57 NA Drosophila melanogaster 61 Sfp93F FBgn0261060 FBtr0301940 2 1 1 98 3R 17561842 17561919 GGCAAAGTTGTAAGTCGCA 59 17561762 17561784 CAAGTAATTACCACTGATCTCCC 58 NA InUTR Drosophila melanogaster 61 CG6353 FBgn0038893 FBtr0084116 2 1 1 96 3R 17487932 17488449 GGATGTTCAAATCCACGGA 57 17487854 17487872 CACGTAATCCAGTTCGGTC 58 NA Drosophila melanogaster 61 slou FBgn0002941 FBtr0084123 3 1 1 150 3R 17380374 17380395 GTAGAGAACATACTGGATCCGA 59 17375453 17380264 AATCCTGGGCAGACATATCC 59 NA Drosophila melanogaster 61 C15 FBgn0004863 FBtr0084111 1 1 1 119 3R 17333022 17333040 ACTGAAGATGACCGATGCC 59 17337812 17337830 GACAGCATCAGTCTGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 2 2 2 80 3R 16965286 16965416 GCCATGGTATTTACAGGTGAG 58 16965458 16965476 CAGCGATAAATGGGTCCAC 58 NA Drosophila melanogaster 61 GluRIIE FBgn0051201 FBtr0110837 3 1 1 80 3R 16472363 16472382 CCCAATTCGATAGCGTTGAC 59 16472237 16472320 GGGCATATGGTTTGTTCGG 59 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 1 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Or92a FBgn0038798 FBtr0083887 2 1 1 96 3R 16331618 16331705 ATGATATCTTCAAGCTCTCGGA 59 16331759 16331780 CGATAATAAATTGCAGGATGCG 58 NA Drosophila melanogaster 61 CG34138 FBgn0083974 FBtr0113486 3 1 1 109 3R 15460927 15461003 AACATTGGTGAACTATCTGTGG 58 15461072 15461091 GAATACAGGCCACCATTAGG 58 NA Drosophila melanogaster 61 CG5555 FBgn0038686 FBtr0083746 2 1 1 81 3R 15005244 15005265 TGCAGAGATTAAACACATCCAG 58 15005117 15005202 TTCATTCGAGCGGAATTCC 58 NA Drosophila melanogaster 61 CG6005 FBgn0038672 FBtr0083719 2 1 1 84 3R 14849156 14849238 AAGGATTGGTTCTACTTTCCGT 59 14849093 14849111 TATCCTGCCATTGCTTGGT 59 NA Drosophila melanogaster 61 snRNP-U1 FBgn0038667 FBtr0083720 2 1 1 60 3R 14808948 14808966 GCCCTATATGCCTCCACTG 59 14808906 14808924 ATTCATAATCGGTGGCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 2 1 1 78 3R 14804290 14804384 AATCTCATCAAGAGCATGGC 58 14804231 14804249 CATCGGAAATGGTGACCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14290 FBgn0038662 FBtr0083723 1 1 1 94 3R 14753838 14753925 CTTTATGAGTACCCACTTCTGG 58 14753765 14753784 CGGAGATGAATTTGGGACTC 58 NA Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 1 2 2 80 3R 14234389 14234409 AACCTCAATCTGGACAAATCC 58 14234151 14234350 CTCGTAGATGAATTGATTGAGC 57 NA Drosophila melanogaster 61 CG7142 FBgn0038595 FBtr0083600 1 1 1 60 3R 14104979 14105000 TATCCTACCGATGCATCTACTC 58 14104940 14104960 AGTACCACCATAATACTGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555,FBtr0290321,FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 2 7 7 271 3R 14001240 14001333 GCGATCAATATGTTTGCTGTC 58 14001565 14001584 ACAGTCTTCAGGAAATCACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7218 FBgn0038569 FBtr0083623 3 1 1 88 3R 13988880 13988898 CTTTGGAGTGCTTACGCAC 59 13988736 13988828 CATTCAAACAGGTGGCCTG 59 NA Drosophila melanogaster 61 CG7218 FBgn0038569 FBtr0083623 1 1 1 80 3R 13988748 13988840 CTGATCATGTTTCAGGCCA 57 13988686 13988707 ATTCGATATCATGATGGTCAGC 58 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0083502 2 1 2 94 3R 13437190 13437208 GTTATCGCAATGGCTCTGG 59 13437051 13437069 CTACCTTCGGTCTTCACCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5863 FBgn0038507 FBtr0083439 3 1 1 60 3R 13237876 13237894 TCGTGTTCATCATTGGAGG 57 13237914 13237936 GCACTCATTACATAATCTCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ns1 FBgn0038473 FBtr0083426 2 1 1 101 3R 12897425 12897446 CGTTGGAATTCCTAATGTAGGC 59 12897283 12897364 TGCATTGATTTGGTCACTCC 58 NA Drosophila melanogaster 61 CG17556 FBgn0038462 FBtr0083375 1 1 1 80 3R 12820777 12820858 ATACGATACACAATGGGTGG 57 12820716 12820734 ATGCGGATTAAGCTTCAGG 58 NA Nonspecific Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 1 1 1 178 3R 12303278 12304474 GCCGGAAAGCAATATAAGGA 58 12304615 12304633 CAATCTGGCAGACCTTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42446 FBgn0259917 FBtr0300198 1 1 1 93 3R 12185481 12185501 AGGGAATACGATGAAATGAGC 58 12185354 12185429 TGTACATAGAGTCTCGTTTGTC 57 NA Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083325,FBtr0083326 1 2 2 72 3R 12174544 12174562 TACCTCGGATCGAGTAACC 58 12173238 12174508 GTTCACCGAGAATTGCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 SF2 FBgn0040284 FBtr0083272 2 1 1 77 3R 12166965 12166983 AAATTGGACGACTCTCGCT 59 12166624 12166642 GTTATCACCGCTATCCTCG 57 NA DesignNoJunction Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083265,FBtr0083261,FBtr0301304,FBtr0100333,FBtr0083263 3 9 9 81 3R 12122761 12122781 AAGGCTGATACACTCAAGGAG 59 12122824 12122912 GTCCATCACAAAGCACCTC 58 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 2 2 2 235 3R 11789811 11789897 AAAGAAGAGATCCGCAAAGC 59 11790095 11790113 TTCGACGGACCTTCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 1 1 1 88 3R 11672743 11672763 ACGATGTAATGAAGAACGACC 58 11672813 11672895 TTTGATTTGTCCGCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 1 2 2 80 3R 11270380 11270398 GCAGTAGAAAGCCCAAGGA 59 11270260 11270336 CACATTGCACCGAACAGTC 59 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 1 2 2 166 3R 11183846 11183864 GCTGCAGAAGTACCATTCC 58 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA Drosophila melanogaster 61 CG6196 FBgn0038323 FBtr0083116 2 1 1 135 3R 11176497 11176585 GATAGCAATAAGGAGCACGAC 59 11176382 11176406 CGGTGCATATAAACTTCATAGTCTC 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 3 3 13 146 3R 11121255 11125838 AAATACGAAGAGGTGGCCA 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG7026 FBgn0038276 FBtr0290022 1 1 1 60 3R 10725891 10725910 CGTGATGGTCAATATGGGTG 58 10725850 10725868 GGGATTCGAGGTGTACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eff FBgn0011217 FBtr0083018 2 1 1 116 3R 10560129 10563151 GGAGATGATTTATTTCACTGGC 57 10559531 10559551 GGGTGGTTTAAAGGGATAGTC 58 NA Drosophila melanogaster 61 CG14850 FBgn0038239 FBtr0082955 1 1 1 60 3R 10386710 10386731 GCCACATCGATCATCTTATCAG 59 10386752 10386770 CGCTACTCCTCAATAGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 2 2 2 99 3R 10132889 10132908 AGAACCTGGAGAAGATCGAG 58 10132743 10132827 ATGTGACCCAGATGGAAGG 59 NA Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 1 2 2 80 3R 9536989 9537007 CAAGTTGCTGATTCTCGGG 58 9536736 9536949 GCTTCACCAATGTCATAATAGGG 59 NA Nonspecific Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 2 2 2 82 3R 9093474 9093559 GATATGAGCGTTCGATCCG 58 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 CG8508 FBgn0038123 FBtr0082783 3 1 1 60 3R 9011666 9011686 CACACCATCTATATGCATCCC 58 9011626 9011650 GAGGATTTCTATCTAAACCAGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 1 2 6 81 3R 8522010 8522793 ATAGTCATGCAGGTGGCTG 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 1 2 2 89 3R 8235153 8236006 CATCCCAAGGATCCCAAGG 59 8236059 8236077 CTTGCGACAATGATGGGAG 59 NA Drosophila melanogaster 61 CG5167 FBgn0038038 FBtr0082583 3 1 1 60 3R 8233214 8233234 CGTTTCCTTTACGAACTGGAG 59 8233256 8233274 GATACGTCATGTAGGCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 1 2 2 80 3R 8229419 8229442 GATGAGAACAAGGAGTCTATTCAG 58 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 CG12256 FBgn0038002 FBtr0082621 2 1 1 83 3R 8051232 8051312 GCCTGTAATGGCGATTCTG 59 8051167 8051185 AGTTCCATAGGAGACGACG 58 NA Drosophila melanogaster 61 CG10014 FBgn0038000 FBtr0082559 2 1 1 94 3R 8049058 8049163 TTCCGCAAGGTTATGTTGC 59 8049221 8049239 GGTGAAGAGCTAGCATCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082548,FBtr0082547 1 2 2 60 3R 7989966 7989985 GAAGAAACTCCTGAGACACC 58 7989925 7989946 TATCTAAAGCTGCTATGGTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr15 FBgn0037993 FBtr0082549 3 1 1 92 3R 7969209 7969228 CCGTAGTCAAACTGGATTCC 58 7965844 7969155 AATATTCACCGTTCAGCACG 59 NA Drosophila melanogaster 61 CG34307 FBgn0085336 FBtr0301079 2 1 1 80 3R 7723605 7723687 CTTCTAACATTGTGGCCATATACC 59 7723726 7723744 TGGCCTGCACTATAATGGT 58 NA Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 2 1 1 60 3R 7706802 7706880 AAACACCTAGTCTTTCCTACAG 57 7706763 7706784 TCGATAATAAAGCCATCGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14720 FBgn0037940 FBtr0082428 1 1 1 60 3R 7537745 7537767 CCTATGGAGCATTATATCGTTGG 59 7537786 7537805 ATGTTCTCGATGACCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6908 FBgn0037936 FBtr0082437 2 1 1 83 3R 7514359 7514442 CTACGGCGACTGGATACTG 59 7514294 7514316 CTATCCATATTGGCATCATCACC 59 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 2 3 3 96 3R 7279014 7279185 GAGATTGGAGAACCGAACTG 58 7278937 7278955 TAGGCAGGGTCAATGTAGC 59 NA Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082393 2 1 2 151 3R 7289473 7289759 TTTACAAAGGAGGAAGGAGC 57 7289873 7289891 CCAATGGCTGTAGTAGCTG 58 NA InUTR Drosophila melanogaster 61 CG5276 FBgn0037900 FBtr0082390 2 1 1 97 3R 7258582 7258601 CTACATGATCCACGAGAGTG 57 7258658 7258733 CCTTGGTTTCGTTGTATTTCTC 58 NA Drosophila melanogaster 61 Ranbp9 FBgn0037894 FBtr0082386 2 1 1 80 3R 7241197 7241274 AAACTATGAGCGAAAGGTCAC 58 7241316 7241334 GTCAAACGGTTGTCCTGAG 58 NA Drosophila melanogaster 61 CG31388 FBgn0051388 FBtr0082356 1 1 1 80 3R 7064747 7064837 TTAATCTTCCATTGACGCACTC 59 7064878 7064896 GCTGTTTGTGAGTCTCCAG 58 NA Drosophila melanogaster 61 CG6629 FBgn0037860 FBtr0082380 1 1 1 127 3R 6941245 6941316 AACACTTGTCGCTCATTGG 58 6941136 6941156 CTAGCCTTATGATCCTTTGGG 58 NA Drosophila melanogaster 61 CG31373 FBgn0051373 FBtr0082318 3 1 1 107 3R 6534855 6534875 CGCTGCGTATTATCGTTATGG 59 6534611 6534786 TAATGAAGACGGCCAAGGG 59 NA Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 2 2 2 108 3R 6522445 6522463 GAAACAATTATGTCGGCGC 58 6523358 6523376 CCTGTTTGCGAATCTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0112895,FBtr0082238 1 2 2 80 3R 6191819 6191837 AGCAGAACTACCAAGTGCA 59 6191682 6191776 AGAACGGATACGTCATTTGC 58 NA Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 1 2 2 131 3R 5947595 5947613 CTTTACCAATCGTGTGCGA 58 5947761 5947784 GGATATAGGTAATACCCAGATCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 2 1 1 123 3R 5645282 5645364 TTTGCTGTCCACTTCATGC 59 5645177 5645200 GCTTATTGAAGAAGTACGAGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 nmdyn-D7 FBgn0028997 FBtr0082083 2 1 1 81 3R 5506381 5506452 TCCTCTTCAGTCCTTATGAACG 59 5506494 5506512 TGGTCTCCACTACGTTGTC 59 NA Drosophila melanogaster 61 CG11033 FBgn0037659 FBtr0300691 3 1 1 81 3R 4886239 4886328 ACTATGACTATAAGCCTCGCC 59 4886371 4886389 CCTTGACCATGGGAAACAG 58 NA Drosophila melanogaster 61 CG11762 FBgn0037618 FBtr0081912 3 1 1 80 3R 4551258 4551278 GCCTGAATCTCTTCGATTTGG 59 4551317 4551386 CCAAATCCACCAATCTTAGTCC 59 NA Drosophila melanogaster 61 CG10053 FBgn0037490 FBtr0081576 1 1 1 143 3R 3073006 3073093 AATTCCTGGTTGGTCTGCA 59 3073200 3073218 CATTGTCTACGTTCCCGGA 59 NA Drosophila melanogaster 61 CG14606 FBgn0037485 FBtr0081603 1 1 1 80 3R 3040652 3040765 CTGCTCCCAGCTAAGATCC 59 3040590 3040613 CTTTAGAGCCACGAAGATAAATCC 59 NA Drosophila melanogaster 61 CG1288 FBgn0250845 FBtr0081604 1 1 1 129 3R 3033529 3033551 GCGGAGATTACATAGATGAAACG 59 3033367 3033385 CCAAGCGGTCAATTTGGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10068 FBgn0037473 FBtr0081611 3 1 1 148 3R 2953377 2953395 AAGGTCCCTCACATTGTCC 59 2953147 2953165 TGTTCTTGATGCGTTTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904,FBtr0081633 1 3 3 60 3R 2889401 2889422 AAGAATGCTAGCAAATCTGCTC 59 2889440 2889461 CCTGTTTGATGTTCTCTTTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi16 FBgn0051561 FBtr0078608 3 1 1 135 3R 2131298 2131375 CTCATGGCAGAAGTTGCTC 58 2131473 2131492 CTACGAGGGACTTGTCATCC 59 NA Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0273439 1 1 2 99 3R 1883074 1883093 GAACCTATACAGCGAACGGA 59 1882589 1883012 ACTGAGCCAGCTCTTTACG 59 NA Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 2 1 1 116 3R 1631990 1632738 AAGCAAATGTTCTGGAACCG 59 1632817 1632835 CTTTACCAGGATCTTGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829 1 1 3 98 3R 1049041 1049061 CATACGTACACGATGCATGTG 59 1048860 1048981 GTAAGTCGCCTGTATCGCT 59 NA InUTR Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 10 10 91 3R 561270 561374 GATCTGCATGTGAAATACGAG 57 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 Karybeta3 FBgn0087013 FBtr0078860 1 1 1 137 3R 476447 476529 CTACAAAGGGCTTCCAGCT 59 476630 476648 TCGTCGATCAGATTCCTGG 59 NA Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 2 2 2 82 3R 468366 468479 CCAACTATCTAAACTTCCTTGC 57 468520 468540 CCAGTACTGCAGATACTTCAG 58 NA Drosophila melanogaster 61 CG18271 FBgn0037263 FBtr0301296 2 1 1 98 3R 467720 469273 GAACTCCTACGACCCACAG 59 469335 469353 AAGCTCTGACTGCATAGCA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG34305 FBgn0085334 FBtr0112501 3 1 1 120 3R 68761 68844 CTTCATAATCCTGCTAGTCCTG 58 68662 68682 CTGAATATTAGCCAAATCCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 3 2 2 162 3R 67637 67713 ACATCCATATACGAGGCGC 59 67493 67513 GCTTAAGTAGGGCTATGTCGT 59 NA Drosophila melanogaster 61 CG14641 FBgn0037220 FBtr0078985 1 1 1 60 3R 57883 57901 ATTCTGTGCCAAACTTGCC 59 57841 57861 CGAACCGCTCTTTAATCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 3 2 2 80 3L 24247008 24251599 GGTTATATTGGCAGGATAACGA 58 24251637 24251658 GCCTATCATAGTGTTTACCTGG 58 NA Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524,FBtr0078523 2 2 2 60 3L 22711290 22711310 TATGTTGGATATGAGGCAGAG 57 22711330 22711350 CTTATCCATAATCTCGCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11438 FBgn0037164 FBtr0078504 1 1 1 60 3L 22460538 22460556 GAGCTCTACCAGTCCTTCC 58 22460578 22460598 GGTAGAGCATAGCATACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 3 3 3 127 3L 21612252 21612331 TTTCAGAAACAGCCGACCA 59 21612422 21612440 CATGGACAGTAATTGGCCG 59 NA Drosophila melanogaster 61 CG7173 FBgn0037099 FBtr0078380 3 1 1 83 3L 21548908 21548926 TAATCTGTGGATCCGACGG 59 21548777 21548864 TCGTCACACTTATATTGAGGCA 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 2 4 4 83 3L 20959607 20959684 TTATTGATGATGCCGTCGAG 58 20959543 20959564 CACAAGCCAAGTAACTATTCCA 58 NA Drosophila melanogaster 61 CG11037 FBgn0037038 FBtr0078334 1 1 1 82 3L 20953861 20953881 GTGACAGTGCCAATTATTCAC 57 20953723 20953742 GCACATATCATACTGTCGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078252 3 1 3 139 3L 20791786 20791804 CCGAGCATAGCAGATTTGG 58 20792331 20792349 ATAGTTATCCTGCAGGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3698 FBgn0037023 FBtr0078273 3 1 1 60 3L 20791171 20791190 AAGAGTCAGCTTAGCCTGAG 59 20791130 20791148 TGGAGTAACGCTGGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113182,FBtr0113183 2 2 2 181 3L 20710401 20712119 GTGTAACGAGTCAACATGCA 58 20710239 20710257 CGCCCATTTATCGAAAGGC 59 NA InUTR Drosophila melanogaster 61 mTerf3 FBgn0037008 FBtr0078215 1 1 1 120 3L 20512988 20513066 CTCTTGATGATTCCTCCGGA 59 20512887 20512905 GTCTAAATTCGCGTGAGGC 59 NA Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 1 2 2 94 3L 20478512 20478596 TCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 Las FBgn0029158 FBtr0290266 3 1 1 93 3L 20424610 20424629 GTAAACGAACCCGTGAACAC 59 20424479 20424554 CGTCTGGCAAATCATCTCG 59 NA Drosophila melanogaster 61 Toll-9 FBgn0036978 FBtr0078240 2 1 1 80 3L 20357490 20357510 ACAACCGGTAGAAACTATACG 57 20357215 20357451 TATAGATTGGGATGAACTTCCG 57 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179,FBtr0273280 3 2 2 85 3L 20349365 20349448 GAGTCGACTTTACACTGTGG 58 20349495 20349514 CTTTAAGAGGCGAGTAACCA 57 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0074830 3 1 3 128 3L 20235767 20235902 GAGAGCACATAGCCATGGA 59 20235993 20236012 CAGATCCACCCGTAATCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 2 4 4 110 3L 19620620 19620639 GGTGTACGAGGATAAGTTGC 58 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG10419 FBgn0036850 FBtr0075032 3 1 1 124 3L 19093098 19093167 AGATGTTGGACAATCCCGA 58 19092992 19093013 CAACTCCTTACGAAGAACTAGG 58 NA Drosophila melanogaster 61 nkd FBgn0002945 FBtr0075039 2 1 1 110 3L 19001345 19003703 CGACTGGAGGAATTCACCT 59 19001253 19001271 TGTTATCTTGCCGTGATGC 58 NA Drosophila melanogaster 61 CG14075 FBgn0036835 FBtr0075024 3 1 1 60 3L 18978425 18978443 CGGATTCCACAAGCTTTCC 59 18978467 18978485 CTTGCTGACGATTTCCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18363 FBgn0036808 FBtr0075090 3 1 1 80 3L 18690908 18690927 CAACGGATCTGATTAACGTG 57 18690783 18690867 CGAAGACATGCTTATAGTTGC 57 NA Drosophila melanogaster 61 CG7728 FBgn0036686 FBtr0075274 2 1 1 139 3L 17011515 17011593 TATCAGGGTGATGCCACTC 58 17011695 17011714 CTTTCTGCGTCACTCATGTC 59 NA Drosophila melanogaster 61 Cpr73D FBgn0036680 FBtr0113176 3 1 1 91 3L 16933672 16933746 TAGGATAAGAGGTCTGTACTCCT 59 16933603 16933621 AGATCTCGAATCCGGTTCC 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 3 10 12 135 3L 16914143 16914290 TGCAATAAGGTCATCACCTC 57 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 CG13024 FBgn0036665 FBtr0273320 1 1 1 90 3L 16803226 16803246 TGATAGTCAGCATGAGTACCA 58 16803097 16803115 TAGCTCTTGGGCATGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Su(P) FBgn0004465 FBtr0075359 1 1 1 95 3L 16604060 16604078 GTCTGGCTGATCTATCGGT 58 16603921 16604001 ACCATTTACCGATGCTGGT 59 NA Drosophila melanogaster 61 l(3)73Ah FBgn0002283 FBtr0075311 3 1 1 80 3L 16582261 16582355 AACTGCAAGAAGATGAATCGC 59 16582397 16582415 TCTGCGTGATATCCTTGGG 59 NA Drosophila melanogaster 61 CG13036 FBgn0036626 FBtr0075416 2 1 1 178 3L 16384711 16384781 ATGTGCTCAATTCTCCAGC 58 16384427 16384445 AATCGAATGCTCTGCTTGG 58 NA InUTR Drosophila melanogaster 61 CG13042 FBgn0036602 FBtr0075433 3 1 1 60 3L 16301229 16301248 CATCATCCAACCGATTGTGG 59 16301188 16301206 AGTCTTGATGATGGGAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13044 FBgn0036599 FBtr0075470 2 1 1 81 3L 16296125 16296209 TCAAATTGTTCGTTCTCGCT 58 16296063 16296081 CTGTAGACCAGAGGAGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13055 FBgn0036583 FBtr0075482 2 1 1 80 3L 16244611 16244629 TTAGCCGAGCCAGTTTCTC 59 16244549 16244567 AGGTTAGCGAAAGGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0273189 2 1 2 80 3L 15948346 15948370 CATATACCTTCTTACGTTCCTAACC 59 15948408 15948499 GGCATCCCTTAGCTTACGT 59 NA InUTR Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 1 1 3 86 3L 15516094 15516112 GAACAGCTCCTACGGACTC 59 15515582 15515662 CTATCCAGTATGGTGACAAATCTC 58 NA Drosophila melanogaster 61 CG7857 FBgn0026738 FBtr0075605 2 1 1 81 3L 15497371 15497390 ACAATATACCCTCCGATGGC 59 15497248 15497327 ACACTGTGACCTGGAAGAG 59 NA Drosophila melanogaster 61 Toll-6 FBgn0036494 FBtr0075614 2 1 1 60 3L 15331473 15331492 GAACCAGATAACCTCCACCT 58 15331515 15331533 AACCAGACGAATCAGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Best4 FBgn0036491 FBtr0113172 2 1 1 92 3L 15293124 15293235 GACTTCGAGCTCAACTGGA 59 15293289 15293309 CTTAACAAGTTCCGGATGCTC 59 NA Drosophila melanogaster 61 Rpn12R FBgn0036465 FBtr0075669 2 1 1 60 3L 15035268 15035291 GCCTAAATCTGCTCTATATGTTGG 59 15035231 15035250 TCCAGTTCGATGTGGAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 1 2 2 80 3L 15010638 15011239 TGATTGAAGCTCACAATCTCAG 58 15010579 15010598 CTTCTGGTTGCAACATCAGG 59 NA Drosophila melanogaster 61 CG5048 FBgn0036437 FBtr0075684 2 1 1 86 3L 14678055 14678073 TCCCAATCAGAGAAGAGGC 58 14678119 14678193 GTTCCAGGGTTCATCTTATTGAC 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 2 7 7 80 3L 14407795 14407883 AGGCTAAGGAAATTACGATCC 57 14407735 14407755 TTCGATCACCCTTCTTTAGAC 57 NA Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743,FBtr0075742 3 2 2 128 3L 14268710 14268729 ACTACCCGTAAACACCAGAC 59 14268820 14298008 GTCATGCAGATCCTTTCCG 58 NA Drosophila melanogaster 61 blue FBgn0041161 FBtr0075781 2 1 1 81 3L 14040886 14040962 ATGACTAATGTGCGTTCCG 58 14040823 14040844 CATACTGTTCGATAACGGTGAC 59 NA Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 2 2 2 91 3L 13994647 13994667 TCGGTTACTGTACAGGTATCC 58 13994517 13994595 CATAGGGATTGCGCTTTCTG 59 NA Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 2 2 2 92 3L 13953170 13953735 AATTAGAGACCACCTTACAAGC 58 13954023 13954041 GAGTGCTCGAGTTTGTGTC 58 NA Drosophila melanogaster 61 Hml FBgn0029167 FBtr0075753 1 1 1 80 3L 13852005 13852085 CAAGCACTCATGTGTACCTC 58 13852126 13852146 ACTGTCTTGGTGAACTTTGTG 59 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487,FBtr0302488 3 2 2 80 3L 13455582 13455600 TGACTTTCGTGAAGTGCAG 58 13455643 13455981 AAGTGATTTAGCAAGTGGCG 59 NA Drosophila melanogaster 61 CG10725 FBgn0036362 FBtr0089323 2 1 1 81 3L 13431225 13431245 TCCAATGTGGTCAACAATCTC 58 13431285 13431364 GTACAGCTATCTCATTCATGCA 58 NA Drosophila melanogaster 61 CG10725 FBgn0036362 FBtr0089323 1 1 1 80 3L 13431225 13431245 TCCAATGTGGTCAACAATCTC 58 13431284 13431363 TACAGCTATCTCATTCATGCAC 58 NA Drosophila melanogaster 61 snky FBgn0086916 FBtr0075827 1 1 1 84 3L 13169094 13169187 GATTCAATATCAGTGGTGTGGG 59 13169232 13169250 GTTGAGACCTTCTCGTGGA 59 NA Drosophila melanogaster 61 RpS12 FBgn0260441 FBtr0075878 3 1 1 198 3L 13016618 13016844 GTTGATGTTGATGTTCCCTCC 59 13017507 13017525 TCTTGTAGTTGGGCTCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075921 3 1 3 89 3L 12743830 12743910 TCGTCGACAGTTCAGTCAC 59 12744414 12744432 CTTCTTTAAGGTGGTGCGG 58 NA Drosophila melanogaster 61 CG10646 FBgn0036292 FBtr0075972 2 1 1 130 3L 12496859 12496878 TAACACCTCAGTACGGAGAG 58 12496697 12496768 CTCAAAGACCTTTGATTGCAC 58 NA Drosophila melanogaster 61 GRHRII FBgn0036278 FBtr0075989 2 1 1 81 3L 12340340 12340358 CCAAGAGGTGTCATAGGCT 58 12335695 12340298 ACATGGAAGATGAAGAACTGTG 58 NA Drosophila melanogaster 61 CG10426 FBgn0036273 FBtr0076007 3 1 1 86 3L 12273951 12274030 CAGGAACCGATGCAATTCC 59 12274078 12274098 ATTGGTTATTCAAGCGTCGAC 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 2 6 6 85 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208828 12208846 TTTGTCCTTTGACCAGGAC 57 NA Drosophila melanogaster 61 CG6931 FBgn0036236 FBtr0076048 3 1 1 86 3L 11983942 11984024 GATAAGGACGCTATCCAATGTG 59 11984071 11984089 CAATTCACCAACTGGCAGG 59 NA Drosophila melanogaster 61 CG5906 FBgn0036217 FBtr0076071 3 1 1 60 3L 11864294 11864312 GAATGACGAATGCCATGGA 58 11864252 11864272 AATAGGAGATACTTTGGGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rt FBgn0003292 FBtr0076146 1 1 1 80 3L 11579883 11579903 GTTGGACACTCTTTCTCTTGG 58 11579592 11579844 GGAGTTCATCGAATACGATGTG 59 NA Drosophila melanogaster 61 wls FBgn0036141 FBtr0076218 3 1 2 82 3L 11161285 11161305 TTAGGAATATTGGCGACAAGC 58 11161001 11161247 CTGGTCTAAAGGAACTTCATAATGG 59 NA Drosophila melanogaster 61 CG6310 FBgn0036121 FBtr0076239 2 1 1 80 3L 11062392 11062475 CTATTGCCTACAATCACTGAGTG 59 11062334 11062354 TGATACTGGATGTTCTCCTGG 59 NA Drosophila melanogaster 61 CG42535 FBgn0260643 FBtr0300948 3 1 1 126 3L 10623544 10623565 TTCCATAGTCGGCTTTATAACC 58 10623382 10623459 GGCGCTTTCAACAAATATTCC 58 NA Drosophila melanogaster 61 CG32060 FBgn0052060 FBtr0076283 1 1 1 115 3L 10417909 10418211 GTTAATGAACGAGGATCAGGC 59 10418288 10418306 TAGACAGCCGCATTTAGCA 59 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 1 2 2 80 3L 9886557 9886630 ACATGCGATACAAGAAATGGC 59 9886497 9886516 CCAGATTGTTATCGGATGCC 58 NA Nonspecific Drosophila melanogaster 61 CG18178 FBgn0036035 FBtr0076412 3 1 1 60 3L 9711487 9711508 ATCCATCGTAAACAAACGTACC 59 9711448 9711468 GGTGAGGACCTTCTTAGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 UbcD4 FBgn0015321 FBtr0076395 2 1 1 90 3L 9692206 9692451 CAATCCACCAAAGGTACGC 59 9692503 9692523 GTCCTTTAAGATGTCCAAGCA 58 NA Drosophila melanogaster 61 CG4080 FBgn0035983 FBtr0076494 2 1 1 95 3L 9383210 9383388 CCTAATAGACTGGCCCTTCTG 59 9383135 9383153 AGATATGCCTTGCACTGGA 58 NA Drosophila melanogaster 61 CG5144 FBgn0035957 FBtr0076523 1 1 1 60 3L 9040904 9040925 ATATAAGGTGTTTGCCGATCTC 58 9040943 9040964 CTTGAAGCACTTATGGTATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13308 FBgn0035932 FBtr0076581 2 1 1 60 3L 8801912 8801930 ATACATTTGCCTGCCTCAC 58 8801954 8801972 GAAGGAGTCGATGTTCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp15 FBgn0000355 FBtr0076572 1 1 1 173 3L 8721630 8721720 AAGTACCTGATTGTCTGCGT 59 8721856 8721874 ATAGCTGTTGTAGCCACGG 59 NA Drosophila melanogaster 61 RNaseX25 FBgn0010406 FBtr0076752 3 1 1 76 3L 7963778 7963796 CAGCGGTTTCTATTCGTGG 59 7963836 7964053 TACGATATGTCGCTGAGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42458 FBgn0259935 FBtr0300248 3 1 1 80 3L 7438641 7438659 GAATACCTTCCAGTGCTCC 57 7438703 7438787 TTATGCATGGATATGCCCG 57 NA Drosophila melanogaster 61 CG8219 FBgn0035693 FBtr0077003 2 1 1 89 3L 6195696 6195714 CCTCATAGAGCCACTGGTG 59 6195767 6195839 GATGATTGGCGAACTTCGG 59 NA Drosophila melanogaster 61 Jon65Aii FBgn0035666 FBtr0077042 2 1 1 80 3L 6045699 6045718 TATGGAGCCAGTTACGTGAC 59 6045760 6045841 GTTACCGGTATCGTAGTGGG 59 NA Drosophila melanogaster 61 CG13288 FBgn0035648 FBtr0113148 2 1 1 83 3L 5902329 5902347 TCATCTCGCAGTACCAGAC 58 5902394 5902507 TGAAGACCACAATAGGCGA 58 NA Drosophila melanogaster 61 Pole2 FBgn0035644 FBtr0077081 2 1 1 139 3L 5889710 5889785 GTGTGCTCAAGGTTGATGG 59 5889589 5889607 CTCCAGTTCCTGTAGTCCG 59 NA Drosophila melanogaster 61 S6k FBgn0015806 FBtr0077114 3 1 1 83 3L 5798977 5798997 CACAAGACAAATTCCAGTGGA 58 5793804 5798932 ACGTAGGTGAAACCTTGGA 58 NA Drosophila melanogaster 61 CG32418 FBgn0052418 FBtr0077119 2 1 1 96 3L 5770235 5770315 CAAGAAACGCATAGAGTTTCTC 57 5770160 5770181 CTCGTTCTTAAGGTTTCTTTCC 57 NA Drosophila melanogaster 61 CG15212 FBgn0040842 FBtr0077163 3 1 1 91 3L 5124706 5124863 GAAGTACCTAGCTCTGACCA 58 5124917 5124935 TATTATCGCCGATCAGGGA 57 NA Drosophila melanogaster 61 CG13713 FBgn0042199 FBtr0073346 1 1 1 81 3L 4697808 4697826 ATATCCAATACGGTGCGCA 59 4697871 4697889 TCCGCTTGAACAGTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11350 FBgn0035552 FBtr0073307 2 1 1 73 3L 4482846 4482931 GAAATTCTTCTTGTTCTGCGC 58 4482966 4482984 GGTACTGGCTAGATGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11342 FBgn0035537 FBtr0073338 1 1 1 60 3L 4367146 4367168 GTTCTAGGTGTGGATATAGACCC 59 4367108 4367126 GGGATTCATTCTCCTCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302566,FBtr0302564,FBtr0302565 1 3 3 60 3L 4195846 4195864 TGGTATGAAGGCCATTTGC 58 4195888 4195906 CCATTGTCGCAGGATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 1 1 2 198 3L 3404904 3416804 TAAAGCAATCGCAGCTGTC 58 3404724 3404744 ATGTAGTGTTGTAACCAGGAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12014 FBgn0035445 FBtr0073077 1 1 1 80 3L 3378475 3378556 GAGTTTACAGCCAGCAATCC 59 3378599 3378617 ACAGATGCAGAGTATCCGG 59 NA Drosophila melanogaster 61 CG12082 FBgn0035402 FBtr0073114 1 1 1 146 3L 3147614 3147632 CTATCCGGATCCAGAGCTG 59 3147425 3147443 TTATCTGCGTACTTCGACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1291 FBgn0035401 FBtr0073023 2 1 1 60 3L 3144566 3144585 ACACCCAGTACTTTGACCAG 59 3144608 3144626 TCGTCCAGTAAAGCAGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2107 FBgn0035383 FBtr0072978 2 1 1 88 3L 2982963 2982983 ATTAGTACCTCAACACTGGGT 58 2983033 2983168 ATCGAATAGCCGATTCCGA 58 NA Drosophila melanogaster 61 mRpS35 FBgn0035374 FBtr0301626 2 1 1 195 3L 2780944 2780962 AAAGCCGCATAAATCGCTG 59 2781118 2781202 CTCGGAATTCTTCATCATCCTC 58 NA InUTR Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127,FBtr0072886 2 2 2 60 3L 2299265 2299774 TAAAGCTGAGTGACCTTATGG 57 2299796 2299814 AGGATGAAGTTGATGCTCG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 oxt FBgn0015360 FBtr0072904 2 1 1 164 3L 2261604 2261723 GAATAGCCAAGTTCACCGC 59 2261458 2261479 CCACATGGATGTAGTAAACGTG 59 NA Drosophila melanogaster 61 osm-1 FBgn0035317 FBtr0072873 3 1 1 95 3L 2230534 2230610 TTCTATGACAGTATGGGTCGTC 59 2230666 2230684 TCCATTCGGACTACAAGCG 59 NA Drosophila melanogaster 61 CG5690 FBgn0035295 FBtr0072842 3 1 1 107 3L 1949147 1949168 GCAAGAATATCATCAGAAGCAG 57 1949233 1949316 TTGAGATTGGTCTCAGTTTCAG 58 NA Drosophila melanogaster 61 Aprt FBgn0000109 FBtr0089420 1 1 1 80 3L 1884550 1884701 ATTCTGTTCCGTGACATATTCG 59 1884491 1884512 GATGTGATCAACAAGCAAATCG 59 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 2 2 2 80 3L 1873975 1874053 TTGTCAAGGAAGTTACATACCG 58 1873916 1873937 CATTGTTTAGATTTGCGGATGG 58 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 2 2 2 101 3L 1825127 1825145 CTGTCTGCTGCATATTGCG 59 1824694 1825063 GAGTAGTGGAGCCTTTCCTC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 2 1 3 160 3L 1803311 1803434 GGACCTAAAGAACGTGGTG 58 1803555 1805018 CATCGTAGACTTGACTGATCTC 58 NA Drosophila melanogaster 61 CG12018 FBgn0027903 FBtr0072775 2 1 1 60 3L 1776004 1776023 GGAGGACAAGATTGTTCTGG 58 1776045 1776064 ATTTAGCTTGCCCTGAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 3 2 2 264 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562748 1562766 CAAGAAGGTGTTTAGGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG12091 FBgn0035228 FBtr0072831 3 1 1 112 3L 1535939 1535957 CCTTCCAACTGTCATTGCC 59 1535845 1535863 AATGAGAATCACGTCGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 1 4 4 110 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345762 1345780 CTTAAGGAATGCGTTCGGC 59 NA Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072726 3 1 2 177 3L 1322442 1322550 AAGACCATTGAGGATCAGC 57 1322283 1322306 CATTGTAGTAGGGATTGTAGTAGG 58 NA Drosophila melanogaster 61 Klp61F FBgn0004378 FBtr0072733 3 1 1 85 3L 1244994 1245205 TCCTGGGAAGATGACTCTG 58 1244927 1244945 TACTCCACCTCCATCATGC 58 NA Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 3 2 2 82 3L 1035388 1035409 GAACAGGATCATTCGTGAATCG 59 1035452 1035568 ACTGCCATCCCTTCATCAC 59 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 1 2 2 71 3L 897908 897926 AGGAATGGCCTACGTACAC 59 897961 898034 TAAGTGTCATCATCGGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG42554 FBgn0260756 FBtr0301253 1 1 1 152 3L 835863 835946 TGAACTTGGCTCATTTCCA 57 836062 836080 TGTCCAGAACTTCCTTGGA 58 NA Drosophila melanogaster 61 emc FBgn0000575 FBtr0072578 1 1 1 91 3L 750215 752277 CAGTTTAGCAACGCCACAG 60 752332 752350 GCTTATAGGTTCCGTGGGT 59 NA InUTR Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 2 3 3 84 3L 201358 201448 GTATTGTCAGACCGTGCAC 59 201496 201514 CTTCATCACCTGTTTGGCC 59 NA Drosophila melanogaster 61 CG13875 FBgn0035104 FBtr0072476 3 1 1 80 3L 181025 181044 TTTGGATAGTAGTGCCAGGC 59 181084 181164 CGAAGATGTAGCTGGTATTCCT 59 NA Drosophila melanogaster 61 CG13875 FBgn0035104 FBtr0072476 1 1 1 80 3L 181023 181043 TATTTGGATAGTAGTGCCAGG 57 181083 181162 AAGATGTAGCTGGTATTCCTC 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3316c FBgn0082970 FBtr0113519 2 1 1 60 2R 17217704 17217725 TCTACAATAGCTTGGGATTCAG 57 17217743 17217764 GGATGTTTACAATCTGAACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:U29:54Ec FBgn0063383 FBtr0086847 1 1 1 60 2R 13587985 13588005 ATGAAACATTTACCCAGCTCG 59 13588027 13588045 TGCGTTGGATATGGAACAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33372 FBgn0053372 FBtr0086364 1 1 1 60 2R 15646700 15646718 ATACATCGGTTCTCGTCCG 59 15646658 15646676 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30260 FBgn0050260 FBtr0100840 1 1 1 61 2R 397506 397530 CCAGTTGATCCATTATATCCATAGC 59 397546 397567 GCACATACCAATTTGATAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg4 FBgn0083124 FBtr0300230 1 1 1 115 2R 4983089 4983107 CTGTGATTACTAGGCGCTG 58 4983454 4983663 AAGACCGATCGTCTGTCTC 58 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 1 2 3 99 2R 20479690 20479767 GAGTACAGAGATCATGTGGG 57 20483387 20483405 TGAAGAACTCAATGCCACC 58 NA Drosophila melanogaster 61 CG3328 FBgn0034985 FBtr0072257 1 1 1 105 2R 20057314 20057332 CTACGGCGTCAAGTTTGAG 59 20057401 20057665 CTTCTGGAGATCGATGGGA 58 NA Drosophila melanogaster 61 PebIII FBgn0011695 FBtr0072164 2 1 1 118 2R 19914099 19914117 CATCTATTCGCTCCGAGTC 57 19914586 19914604 TGGTGTACTTATCCTCGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30178 FBgn0050178 FBtr0072159 1 1 1 60 2R 19874307 19874325 GTAAGACGTACCATCCGCA 59 19874349 19874367 TTAGGATCAACCACCAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2970 FBgn0034936 FBtr0072145 2 1 1 80 2R 19837433 19837511 GATCCGTACAAAGCCTCGT 59 19837555 19837573 CTCCGATCTCATCGTCGTC 59 NA Drosophila melanogaster 61 CG5597 FBgn0034920 FBtr0072131 3 1 1 82 2R 19775857 19775875 GATCCACAATGAGACGCAG 58 19775918 19776017 CCATGTCGTTGGATATTATCGT 58 NA Drosophila melanogaster 61 CG4763 FBgn0034910 FBtr0072238 3 1 1 94 2R 19711251 19711269 ATATTCGACGACCTCCGAC 59 19711079 19711193 ATGGTGATTCCAACTCCCA 58 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301262,FBtr0301263 3 2 2 83 2R 19487211 19487291 TTCCTTAAACTGCAACGGG 58 19487146 19487167 GATGATCTTTGTTGTGACTTCG 58 NA Nonspecific Drosophila melanogaster 61 skpF FBgn0034863 FBtr0072022 3 1 1 62 2R 19346185 19346205 CAGTCATCAAATTGCAGTCCT 59 19346143 19346161 ACTTGGCAGTCTCGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072014 1 1 4 108 2R 19274343 19274540 TGCCACAGACTTTGAAGAG 57 19274612 19274630 GCTGATGTTTCTTGTGTCG 57 NA Drosophila melanogaster 61 vir FBgn0003977 FBtr0072037 3 1 1 90 2R 19249335 19249353 CAGTAACCTGACAAGCGTG 58 19249207 19249281 GAAAGTGAAGTCGTGCTCC 58 NA Drosophila melanogaster 61 CG42284 FBgn0259179 FBtr0299663 1 1 1 80 2R 18716121 18716196 ACAGATAACTTGGAACGCAC 58 18716235 18716257 CTGAATTAGTATCCGACTCACAC 58 NA Drosophila melanogaster 61 Obp58d FBgn0034770 FBtr0071872 1 1 1 80 2R 18594567 18594641 AAGTGTAACACATCGAGGG 57 18594684 18594703 TATAACGAAGCACTTGACCA 57 NA Drosophila melanogaster 61 RYBP FBgn0034763 FBtr0071868 2 1 1 140 2R 18558699 18558717 TATAGAAACTCGGCGGAGG 58 18559205 18559223 GTTGGGCATGTTGACACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt58Fa FBgn0040091 FBtr0071934 1 1 1 123 2R 18531146 18531318 GGGAATATGGAATCTCAATGGA 57 18531044 18531062 CAAAGTGACCCTCGTTGAC 58 NA InUTR Drosophila melanogaster 61 dnr1 FBgn0260866 FBtr0071837 2 1 1 232 2R 18454187 18479839 GTCTGGAGAAGGTCTGTCG 59 18453973 18453991 CAAATTACGCACGCTCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 1 2 2 114 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357175 18357193 TAGGGCTATGCGAATCCTC 58 NA Drosophila melanogaster 61 CG6613 FBgn0034694 FBtr0071758 3 1 1 97 2R 17990876 17990954 GAAGAGTTTGGAGGTCCTG 57 17991015 17991033 ACAGGAAGGAGTCCTTCAG 58 NA Drosophila melanogaster 61 PpN58A FBgn0025573 FBtr0071734 1 1 1 60 2R 17769641 17769659 GTGTATCTGCTACTGGGTG 57 17769599 17769617 GGGTCAATGTTTCGATGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4377 FBgn0034664 FBtr0071739 2 1 1 89 2R 17723318 17723402 GTTCTGATTCAGCTGATTGCA 59 17723249 17723267 AACAGTAGGAATTGGCGGA 59 NA Drosophila melanogaster 61 CG4377 FBgn0034664 FBtr0071739 1 1 1 88 2R 17723318 17723402 GTTCTGATTCAGCTGATTGCA 59 17723250 17723268 ACAGTAGGAATTGGCGGAG 59 NA Drosophila melanogaster 61 CG4386 FBgn0034661 FBtr0071743 2 1 1 85 2R 17687594 17687612 GTTTCAAGGGCGAGAATGG 59 17687462 17687548 TTGAACCTCCTGAAGAGTATCG 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 2 2 2 60 2R 17557068 17557088 ACTTATCTACCAGACGCATCC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15674 FBgn0034642 FBtr0071659 1 1 1 110 2R 17519970 17520478 AAACGAGAAGGCAAACCTC 58 17520552 17520570 CTTCCAGTCAGTTCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 3 2 2 193 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471459 17471479 CCATAAGTTTGAGGGAGAGGT 59 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 3 2 2 86 2R 17443998 17444016 GATCAGTGCCTTACCTGCA 59 17444064 17444154 GTCAAACTTGTAGGCATTGGA 58 NA Drosophila melanogaster 61 CG4038 FBgn0011824 FBtr0071639 2 1 1 282 2R 16984713 16984731 ATTTGGTAAACCTCGTGGC 58 16984115 16984135 GTTGAAGTAGGGAACATCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9346 FBgn0034572 FBtr0071526 1 1 1 80 2R 16901890 16901967 GGCAAACCTTACGTCAAGC 59 16902009 16902029 GATATCTTCGTCCAGAGCCTC 59 NA Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086478 3 1 2 121 2R 15588311 15588517 TTCTAAAGCATGGACCCGA 58 15588208 15588226 TACAAGCCCTCAGCATCTC 59 NA Drosophila melanogaster 61 CG33453 FBgn0053453 FBtr0086564 2 1 1 80 2R 15140190 15140274 ATACATGTCCTTATGGCTTGC 58 15140130 15140152 CATAGTCTCCTGAAGGTAATGGT 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923,FBtr0086660 1 4 4 96 2R 14522338 14522356 GAATTGAAACGTCGCATCG 58 14521776 14522278 GAAGTGTGAAGTTGGCTCG 59 NA Drosophila melanogaster 61 sec6 FBgn0034367 FBtr0086709 1 1 1 102 2R 14513726 14513745 CGTTGTGAAGTCCCTTTGTG 59 14513805 14513893 GTTGTCAAGATAGCTAGAAAGTCC 59 NA Drosophila melanogaster 61 CG5493 FBgn0034364 FBtr0086713 1 1 1 80 2R 14504618 14504717 GCCTACATAAATGACAATCTGGG 59 14504560 14504581 GTATAGGTGAAGGGAGACAGAG 59 NA Drosophila melanogaster 61 mRpS28 FBgn0034361 FBtr0301637 3 1 1 81 2R 14502097 14502177 TAATTGATCTGGACAACGCC 58 14502035 14502056 AAGTCTATGTAGAGATCATCGC 57 NA Drosophila melanogaster 61 Idgf5 FBgn0064237 FBtr0086668 3 1 1 161 2R 14281813 14281831 GTGGCTGGTTTAGTTCCTC 58 14281953 14282040 GAACATCAATAAAGAGTTCCGC 58 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 2 2 2 80 2R 14073871 14073945 GACGTCTGATTAAGGAATACGTG 59 14073813 14073831 CCACCAGAATCGCAATACC 58 NA Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 3 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0301182,FBtr0301183,FBtr0299817 2 4 4 60 2R 13620076 13620154 GCAACTAACTTATGGCTACGG 59 13620175 13620194 CAGGATATTGTCCACGAACG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30106 FBgn0050106 FBtr0086893 2 1 1 113 2R 13538597 13538671 TAACCTGAAGCATCTCGGC 59 13538502 13538521 TAGACCAGGAAGTGCAACAG 59 NA Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 3 1 1 167 2R 13479676 13479697 GGATTAGTTCTGCAAGAAACAG 57 13479466 13479548 GAGAGCTTGAGCAACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6520 FBgn0034224 FBtr0086953 1 1 1 60 2R 13363226 13363245 AAATAATGGAGCTGCAAGCG 59 13363185 13363205 CCATCTCGATCGTTTAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923,FBtr0086924 3 3 3 192 2R 13358563 13358687 CATCCCAAGTTCAACTTCGT 58 13358842 13358860 TCTCAACATGCAGATCGCT 59 NA Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 3 2 2 80 2R 13320625 13320704 TCCGAAGAGATCTAGAACCA 57 13320564 13320583 CCATTGGACGATGTAGACTC 57 NA Drosophila melanogaster 61 CG17290 FBgn0034201 FBtr0086989 2 1 1 76 2R 13042246 13042361 CATGAAATTCCTGATCATTGCC 58 13042398 13042416 AGTCGTAGCCAGAAAGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9640 FBgn0034182 FBtr0086972 1 1 1 196 2R 12933670 12933688 GTGCAAGAAACTTCTCGCC 59 12933848 12933923 CGGTCCTTAAATGAGCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 ste24b FBgn0034175 FBtr0087060 3 1 1 101 2R 12887566 12887587 GGATGATCCACTAGCAATACTC 58 12887433 12887505 TTGTAGGCCACTTGTATGTC 57 NA Drosophila melanogaster 61 CG8306 FBgn0034142 FBtr0087120 2 1 1 103 2R 12477570 12477651 CAGGCCTATCTTGGTTCGT 59 12477485 12477503 CCAATAGACGCTTGCTGTC 59 NA Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0113086 1 1 2 77 2R 12422578 12422596 TTTAGAGTTACGTGGCTCG 57 12422703 12422721 ATGTTCTTGTACGAAGGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7755 FBgn0034105 FBtr0087182 3 1 1 60 2R 12170026 12170044 TTCATGTGGACAATCAGGC 58 12169984 12170002 TCATTGCAGATCTTGAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30094 FBgn0050094 FBtr0087233 2 1 1 107 2R 12029789 12029866 TTCAATGGCAGACGATCCA 59 12029934 12029955 TTGTTTGTCCCATAGTCAACTC 58 NA InUTR Drosophila melanogaster 61 Rrp42 FBgn0034065 FBtr0087206 2 1 1 131 2R 11903003 11903077 ACATCCTGATTCTGGAGTGTG 59 11903170 11903188 TGATGAGGTCTGTGATGCC 59 NA Drosophila melanogaster 61 CG30089 FBgn0050089 FBtr0087285 3 1 1 81 2R 11620408 11620426 CTAACGGCTAATGTTCCCG 58 11620470 11622611 TGAATGGATCGCAATTCTGC 59 NA Drosophila melanogaster 61 CG42524 FBgn0260429 FBtr0300853 3 1 1 127 2R 11502797 11518224 GAAGTGCGGATGTCTTTGG 59 11525289 11525312 GAAGTCCTTCTCTATGTGTATGTG 58 NA Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 3 2 2 80 2R 11406699 11406788 AGTTGATGAGGAGAGCAAGG 59 11406638 11406656 TACGGCCGGATTAACACTG 59 NA Drosophila melanogaster 61 CG11808 FBgn0034000 FBtr0087366 2 1 1 81 2R 11104366 11104452 GTAATATTCCATCCGAACTTCCTG 59 11104491 11104510 TTTGGCGGTAATTGTACAGC 59 NA Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404,FBtr0300325 1 2 2 80 2R 11087804 11087894 GTATGTCCTATTTCATCAAGCCAG 59 11087747 11087767 GCATTTCTACTGTCAAAGCCA 59 NA Drosophila melanogaster 61 NaPi-T FBgn0016684 FBtr0087463 1 1 1 87 2R 10732647 10732665 GAACTCTACGGACTTGGCT 59 10732462 10732596 GTACGGAATATTCGCCCAG 58 NA Drosophila melanogaster 61 Tango7 FBgn0033902 FBtr0087579 3 1 1 87 2R 10051636 10051709 CCATCATGATCACGATACCC 58 10051568 10051586 AATGGAAGATTGGGAGCCT 58 NA Drosophila melanogaster 61 CG8257 FBgn0033900 FBtr0087580 3 1 1 115 2R 10048588 10048665 TGTATAGCCTCAAGGAGGG 57 10048491 10048512 TCTCCATTTAAACGGACTATCC 57 NA Drosophila melanogaster 61 CG18371 FBgn0033893 FBtr0087599 1 1 1 67 2R 9916439 9916457 ACTGAATATCGGCAGTCCG 59 9916488 9916506 AAGTGATCTCCTTGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13332 FBgn0033851 FBtr0087674 3 1 1 94 2R 9413107 9413125 CATCAGCAGAGCTTTGAGG 58 9413183 9413201 TTTAGCTGACGTTCCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 CG18278 FBgn0033836 FBtr0087716 1 1 1 204 2R 9296746 9296764 CCTACCTAACCGATCTGCT 58 9296503 9296578 AACCAGTGCTTATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG17047 FBgn0033827 FBtr0087753 3 1 1 81 2R 9188252 9188271 TGACCAGCAACTATATGCCT 58 9188313 9188613 AAGGAGTATTCGATCATGCTG 58 NA Drosophila melanogaster 61 CG10799 FBgn0033821 FBtr0087748 2 1 1 60 2R 9145636 9145654 GACACTAGTAACAGCACGG 58 9145675 9145696 CGTTAACATTCTCATTGCTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13324 FBgn0033789 FBtr0087796 2 1 1 63 2R 8936958 8936977 GAACGTGAACGTGAACTACC 59 8936914 8936932 GTTGTCGTACACGATCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17019 FBgn0033783 FBtr0087806 1 1 1 80 2R 8820996 8821015 TTAAAGCTCAAGCCCAAGGA 59 8820857 8820955 CTCCTCTTTCTCTAGACAGCC 59 NA Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 1 1 1 140 2R 8816708 8816726 TGATCATGAAGGCTCGTGG 59 8816829 8817290 CTCTATCGCAATCTGTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 CG13154 FBgn0033736 FBtr0087953 3 1 1 171 2R 8315279 8315298 AAACGTTCAGAGCTATGGGA 59 8315066 8315086 TTCTCTAAACGCTCTATGGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0301874 2 1 3 195 2R 8225946 8226050 ATACTTAGGCAACATACACGC 58 8226207 8226225 TCAGGATCTGGTCGTTCAG 58 NA Drosophila melanogaster 61 RnrS FBgn0011704 FBtr0088046 2 1 1 153 2R 7871808 7872334 TGTACAAGAAGGCTGAGGC 59 7871673 7871691 TTCTCGTTTACGATGCCGT 59 NA Drosophila melanogaster 61 CG34230 FBgn0085259 FBtr0112423 1 1 1 124 2R 7749185 7749203 TACCTCTCAGTTTCCTGCC 58 7749290 7749365 AAGTACAAGCCTAGAAGGGA 57 NA Drosophila melanogaster 61 Gr47b FBgn0041241 FBtr0088127 2 1 1 86 2R 7250564 7250645 TTTACCTGGTGTACAACGGA 59 7250691 7250712 ACTGGTGATCTTTGATTTGCTG 59 NA Drosophila melanogaster 61 Vhl FBgn0041174 FBtr0088115 1 1 1 60 2R 7167596 7167614 TTCCGGGATTACTACACGG 58 7167638 7167656 TCGGCTGAAAGATCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13216 FBgn0033591 FBtr0088193 2 1 1 60 2R 7125932 7125952 GCCGTAGATAACTTTCAATCG 57 7125892 7125910 CCAATCCCTGAACATTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0300862 2 1 2 84 2R 6829104 6829201 CGAATGGGTATTTCTGATCATCTG 59 6829043 6829061 GACTATGGGACTGGCACTC 59 NA InUTR Drosophila melanogaster 61 cag FBgn0017414 FBtr0088239 3 1 1 85 2R 6781292 6781369 GCCAAGAGGTTTAACATTGGA 58 6781227 6781245 TCTCCACTCAACAGACCCT 59 NA Drosophila melanogaster 61 CG7686 FBgn0027525 FBtr0088245 3 1 1 72 2R 6726084 6726164 CAATCCAATAATGGTTAAGGGC 57 6726033 6726051 GTGCACCAAATGGAAGGTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7686 FBgn0027525 FBtr0088245 2 1 1 70 2R 6726084 6726164 CAATCCAATAATGGTTAAGGGC 57 6726035 6726053 GCACCAAATGGAAGGTGAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Gr47a FBgn0041242 FBtr0088352 3 1 1 106 2R 6250725 6250937 TTGGATCGTTTGCTCTCCA 59 6251007 6251025 AGAAGCGTTAGAGTCAGCT 58 NA Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088355 2 1 3 113 2R 6243852 6243934 CGATACAATACGATACACATGAGC 59 6243762 6243783 TAAACATAGCTCTTTCGGAAGC 58 NA InUTR Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 3 2 2 82 2R 5772394 5772475 TACGGCAGGTCTATTCTTACG 59 5772332 5772352 GCATAGTATCCAGACTGTGGA 59 NA Drosophila melanogaster 61 CG1663 FBgn0033449 FBtr0088477 3 1 1 84 2R 5724928 5725005 AGCCACCATGACTACATCTC 59 5725049 5725070 TGAAGTACTGAATAACTCCGGG 59 NA Drosophila melanogaster 61 CG30339 FBgn0050339 FBtr0088534 3 1 1 81 2R 5490113 5490131 CTTATGCCTGAGCTCTTCG 58 5489988 5490069 GCAATCGAACATAGGTTCCA 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 2 5 5 80 2R 5066160 5066178 GTTGGTTTGAGACATCCGC 59 5066037 5066122 CGTTGATGAGTATCTTATTCACGAG 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0088627 1 1 4 80 2R 5013706 5014540 ATTTGCAATACTAATCCGGCTG 59 5013533 5013552 CTTATAGGCGGTCTTCATGC 58 NA Drosophila melanogaster 61 Dbp45A FBgn0010220 FBtr0088564 1 1 1 152 2R 4976935 4977019 CCAAATGGAAGCTTTGTATCGT 59 4977132 4977150 AACCTCGCACTGTCTACAG 59 NA Drosophila melanogaster 61 Ance-4 FBgn0033366 FBtr0088664 2 1 1 94 2R 4927987 4928070 TATTCCGTATGGCCATCCAC 59 4927912 4927932 CATGTCCACAGTATCGTTGAG 58 NA Drosophila melanogaster 61 CG8230 FBgn0027607 FBtr0088674 1 1 1 80 2R 4832677 4832695 GTCAATGAAGTGCTCGAGG 58 4832543 4832636 CTTAAGATCCGGGAACTTTCTC 58 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088647 3 1 5 126 2R 4788927 4789841 ACTAGTTTGGGCCTATCCG 58 4789931 4789949 ATGACTCCGAGATCGTCTG 58 NA InUTR Drosophila melanogaster 61 beta3GalTII FBgn0033315 FBtr0088728 3 1 1 60 2R 4514522 4514541 CATGCAGTCCCTGTATATCC 57 4514481 4514501 GTCCACTTTCAGCATATACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LvpL FBgn0002571 FBtr0088758 2 1 1 80 2R 4345260 4345282 GTCAGTTCTACCAGATCTATCCC 59 4345140 4345225 GTTGCGTAATACCTATGAGATCTC 59 NA Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 3 2 2 84 2R 3991723 3991742 AAATTCACAAACTCGTTGCG 58 3991600 3991678 CGTATTTAGCAATAAGCTCGG 57 NA Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 1 2 2 83 2R 3991723 3991741 AATTCACAAACTCGTTGCG 57 3991600 3991678 CGTATTTAGCAATAAGCTCGG 57 NA Drosophila melanogaster 61 sut3 FBgn0028561 FBtr0088779 2 1 1 81 2R 3978156 3978174 GATGACGATCTCCTGCCTC 59 3978213 3978299 CTCATGTATAGTCGACATTAGTTCC 59 NA Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088865 2 1 2 87 2R 3919672 3919690 CAACATGCACGAGATCCTC 58 3919739 3920819 ATAAAGTTCCCTGAAGTTGCC 58 NA Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 1 1 1 69 2R 3836024 3841425 GCAGTTTAAAGAGTTCCAGGA 58 3835975 3835994 CTTTGGGTCTATTTCGAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0088885,FBtr0113374 3 2 2 61 2R 3817780 3817798 CGATAAGCTGTACTGCCTG 58 3817737 3817757 CATCCTTGATATGGTTCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30383 FBgn0050383 FBtr0088897 2 1 1 95 2R 3711951 3712205 AAGATTAAGAAAGGCGATTCCC 58 3711877 3711895 TTTGCTTCGATACCCAACG 58 NA Drosophila melanogaster 61 CG1845 FBgn0033155 FBtr0089021 2 1 1 61 2R 3164278 3164296 GCTTTGGATACCGGAAGTG 58 3164169 3164256 CAATTGAATCTATTGGCTCCAG 57 NA DesignRelaxed Drosophila melanogaster 61 nec FBgn0002930 FBtr0089052 1 1 1 105 2R 3044372 3044390 CAAGTTGATGGATCAGCCG 59 3044219 3044304 GAACTTGGCATAGGAAGCTG 59 NA Drosophila melanogaster 61 lbm FBgn0016032 FBtr0089033 2 1 1 80 2R 2939111 2939193 CCTTCGAGTTAATCTGCTTCG 59 2939235 2939253 ACTAGAACTCCATCCGTCG 58 NA Drosophila melanogaster 61 Mob4 FBgn0259483 FBtr0086141 1 1 1 80 2R 2583760 2583853 AAATCCAAGGACTTCTGTCG 57 2583699 2583717 CTGTATGTACTGCTGCACC 58 NA Drosophila melanogaster 61 CG15909 FBgn0033090 FBtr0086122 2 1 1 81 2R 2570752 2570833 TGTTCTATGGTATGTCTTCGTG 58 2570872 2570893 CAAATTAGCTGTGAGTCTTGAC 57 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 2 2 2 87 2R 1952497 1952515 AGTCCTACCCTGTGTTCAC 58 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467,FBtr0091528 3 2 2 81 2R 1091741 1091761 GCATTGGTAAATTCATCTGGC 58 1091626 1091701 CTTGGATGTTGGATATGTCGTC 59 NA Drosophila melanogaster 61 CG14464 FBgn0033000 FBtr0299923 3 1 1 136 2R 716987 717058 GTCTGGACATATGCGACTG 58 717156 717176 ACCGTCATATGTTATGTCCTC 57 NA Drosophila melanogaster 61 Gprk1 FBgn0260798 FBtr0302242,FBtr0111121 1 2 2 80 2R 345593 345669 CCCACACCTATGAATACTCCA 59 345533 345551 ATAAGTCAACCGGGACCTC 58 NA Drosophila melanogaster 61 RpL21 FBgn0032987 FBtr0085961 2 1 1 115 2L 22247802 22247820 TTCTCAACTATACGACCGC 57 22247631 22247650 AATAACTCCATGCTTTCGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 3 3 3 80 2L 21680174 21680769 AGCTAATGAACCGATTGTGG 58 21680113 21680131 TGTTGTCAGCCTCTTTCTG 57 NA Drosophila melanogaster 61 CG2617 FBgn0032877 FBtr0081391 1 1 1 60 2L 20682929 20682950 CTCCTCGTTCTCTATATGTTCC 57 20682971 20682989 GTTGCAGCAGGTAGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399 1 1 2 151 2L 20681739 20681757 ATTCGTACATGCAGTTGCG 59 20681521 20681624 CTTGATGCGAACTTTGGCA 59 NA InUTR Drosophila melanogaster 61 CG2478 FBgn0032872 FBtr0081403 1 1 1 80 2L 20651940 20651959 CACTGCGAGGAATAGTTCTC 58 20651819 20651898 CTTGAAAGCTGATAGCCCAC 59 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404,FBtr0081405 1 2 2 108 2L 20645740 20645758 TTTACACTCGACGGACGAC 59 20645433 20645671 TGAACTTATTTACACTGCGCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404 2 1 2 138 2L 20645741 20645759 GTTTACACTCGACGGACGA 59 20645349 20645422 TTTCAAACGGTACCTGCCA 59 NA InUTR Drosophila melanogaster 61 CG15130 FBgn0032860 FBtr0081366 2 1 1 64 2L 20424293 20424311 AAGAACTCCGAAATGGACG 57 20423246 20423264 AGATAGTCGCTCTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 Kua FBgn0032850 FBtr0081336 3 1 1 80 2L 20102062 20102080 ATACAGCAACACTTCGGCT 59 20102121 20102206 CCACTTGTGTATCTGATTGGTC 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301721,FBtr0301719 2 3 4 98 2L 19956310 19956328 TGGAAAGTCCTATCTGGCC 58 19956389 19956479 TGGTCAACATTGAATGTGGC 59 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 3 4 4 81 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391896 19391914 GCTTGTCAGCTCTTCAGTG 58 NA Drosophila melanogaster 61 Faf FBgn0025608 FBtr0081126 1 1 1 80 2L 18706845 18706864 CAGTTGTATTCAAGCTGCCC 59 18706727 18706803 AGTGATAAACGTCAAGCACC 58 NA Nonspecific Drosophila melanogaster 61 CG10414 FBgn0032691 FBtr0081079 1 1 1 87 2L 18611387 18611405 ATCATGCCCAGGATAACCC 59 18611252 18611336 ATGTAGGGAATTGTTCGCG 58 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0081085,FBtr0081086,FBtr0300676 2 4 4 96 2L 18483895 18483916 CCGATCAGGACATGTTAATGAG 59 18476903 18476988 GAAGTCATTAATCTCTTGGGACTG 59 NA Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 2 2 2 83 2L 18141800 18141818 AGTATTGCGAAGTGCTCGA 59 18141242 18141753 TTCTGGAAACTGGCTTGCT 59 NA Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021 3 1 3 89 2L 17971991 17972268 ATTCCGCAAGAAGTTGACC 58 17972320 17972339 ATTCGCTTGATTCGTTTCCT 58 NA Drosophila melanogaster 61 CG15143 FBgn0032647 FBtr0080993 3 1 1 103 2L 17523933 17524014 CTTTACAGAGAATCCTCTGCG 58 17523850 17523869 GGGAATATAGATGGCAGGGA 58 NA Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 3 1 1 125 2L 17411613 17412807 ATCAGGGAGCTGCTTTCTG 59 17412896 17412914 ACGTCTTAGCCGAATCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 2 2 2 80 2L 17383511 17383529 AGCTGAAGGACTTTCCCAG 59 17374728 17383472 CAAATCTATTCCGGGAAAGATCTG 59 NA Drosophila melanogaster 61 ApepP FBgn0026150 FBtr0080956 3 1 1 60 2L 16909572 16909593 CAGTTGAAGGAGAAGAATGCTG 59 16909533 16909551 ACCAAGCGATTTCATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ApepP FBgn0026150 FBtr0080956 1 1 1 60 2L 16909496 16909514 CGGACATTGACTTCAACCC 58 16909454 16909473 AGTAGTTCATCGTTGGTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4631 FBgn0032590 FBtr0080871 3 1 1 60 2L 16608619 16608640 CTTTGGATGAAGAGTACCACAG 59 16608660 16608679 TTATCCCGTCTGCTCAAGTG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4440 FBgn0040984 FBtr0080835 1 1 1 81 2L 16329973 16329992 CCAGTATCGCTAAAGAAGCT 57 16330095 16330113 GAGGCTATGGCAAACAGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp303a1 FBgn0001992 FBtr0080828 3 1 1 60 2L 16294629 16294649 GACCAACGAAGATATTGACGG 59 16294671 16294689 ATTGAAGGTTCTCAGGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp303a1 FBgn0001992 FBtr0080828 2 1 1 60 2L 16294851 16294869 GAAATCAGGCGGAAAGCAG 59 16294888 16294911 CAGTACATAAACACTCGTTAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 2 3 3 84 2L 16045891 16045909 GGGATCCGAGAAGGAATCG 59 16045955 16046035 GATTTGGCTCGCAATACTCTC 59 NA Drosophila melanogaster 61 CG15260 FBgn0028850 FBtr0300846 3 1 1 60 2L 15291773 15291796 CGATCTATCGTTGATCCTTAAGTC 59 15291736 15291756 ATCGTTGGAGGAATTGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33911 FBgn0053911 FBtr0091915 3 1 1 105 2L 15232914 15232933 AATCGGATGTTCAAAGTCGA 57 15233001 15234588 TAGAACGAGAAATGCAGCG 58 NA Drosophila melanogaster 61 CG3491 FBgn0028887 FBtr0080675 1 1 1 95 2L 14928412 14928493 GGACAAAGTGGAGAAGATTACC 58 14928547 14928567 GTGTTTGTGGATTCATCTTCG 58 NA Drosophila melanogaster 61 CG31835 FBgn0051835 FBtr0080667 1 1 1 60 2L 14736025 14736047 CTGCGTGAACTATAACCTATGTG 59 14736065 14736085 ATGCTCTTCCGTTTCTATCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31769 FBgn0051769 FBtr0080602 2 1 1 97 2L 14110567 14110642 TTCAATTACGGATGGGAGC 57 14110488 14110506 TACGACTGTTTCAAGCACG 58 NA Drosophila melanogaster 61 tam FBgn0004406 FBtr0080571 3 1 1 131 2L 13825676 13825749 AAACCCAGTACCAAGGCTC 59 13825563 13825585 TGTTAAGGAAGTCCTTGGATAGG 59 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942 2 1 2 96 2L 13791157 13791228 CCGCAGATAAACCTCTTCG 58 13791288 13791306 GAACAACCTTCCGGAATCG 58 NA Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080529 1 1 2 84 2L 13708888 13708961 GATTGAAGGTTTACGACTGGA 58 13709007 13709025 AACTCATACATGGTGGCCT 58 NA Drosophila melanogaster 61 CG16956 FBgn0032523 FBtr0080520 2 1 1 102 2L 13414392 13414466 TCAGTTGGGACAAGTACCG 59 13414308 13414326 GAAGTCAGGAGCTACCGAG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090021,FBtr0090017,FBtr0090013,FBtr0090023,FBtr0090018,FBtr0090026,FBtr0090022,FBtr0090016,FBtr0090029,FBtr0090015,FBtr0090025,FBtr0090014,FBtr0090019,FBtr0090027,FBtr0090024,FBtr0090020 1 17 17 80 2L 12738105 12738125 ACCAATCTACTCGCATTTCAG 58 12738166 12738249 TCAATAAAGCGATCTCCCAC 57 NA Drosophila melanogaster 61 CG5421 FBgn0032434 FBtr0080383 2 1 1 86 2L 12446609 12446779 TATCCTGTGGCAAGACAAGG 59 12446542 12446561 GTCGGTGTCATGAGTATGGA 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0100125 3 1 4 129 2L 12404107 12404443 CCATCATTACTCCGAATTCGA 58 12403998 12404016 ATGTCTGATCTCCTCTCGC 58 NA InUTR Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343 2 1 2 109 2L 12173030 12173049 TGAATCCAATTGAAACGCGA 58 12173121 12173222 TTTGATCGCCCAATTGCAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG6734 FBgn0032395 FBtr0080312 2 1 1 157 2L 12019224 12019242 GAGCATTCACGAAGACCTG 58 12019025 12019104 TGCCACTCAGTTTGTATCCA 59 NA Drosophila melanogaster 61 CG31706 FBgn0051706 FBtr0080241 3 1 1 95 2L 11530639 11530657 GAACGTACTACGCCAATGC 59 11530172 11530582 AATCTCCTGTACCGATTCCTC 59 NA Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 1 3 3 80 2L 10774660 10774754 TACGACAATTGTCCAATTCTCG 59 10774601 10774619 TTTCGCCGTGGTAGTAGTC 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021,FBtr0080022 1 3 3 60 2L 10427347 10427365 CAACTCGGTGATGAAGGTG 58 10427387 10427407 GTACATCAAATACACGGTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RfC3 FBgn0032244 FBtr0080019 2 1 1 80 2L 10420281 10420299 CAAGTACGCAAGAGGTCTC 58 10420343 10420416 GACATAGGCAGCTCAAGTC 58 NA Drosophila melanogaster 61 CG5366 FBgn0027568 FBtr0080054 2 1 1 80 2L 10358763 10358781 CGACATCAAGATGCTGACG 59 10358639 10358721 TGATCGAGTCTTAGCAGAACC 59 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079951 2 1 2 88 2L 10232584 10232602 GGCATTGGACAAATTCTGG 57 10232654 10233769 TAACGCCATCGATCTTCTG 57 NA Drosophila melanogaster 61 Cks30A FBgn0010314 FBtr0079799 2 1 1 99 2L 9331100 9331191 TTCGAGTACAGACATGTGGT 59 9331253 9331271 GCTGTACGCCAATTGATCG 60 NA Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 2 2 2 61 2L 8940186 8940262 CTGACTGGGCCTACTATCTG 59 8940144 8940162 GATAATGTGATGCGCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Peritrophin-15b FBgn0040958 FBtr0079714 1 1 1 136 2L 8394791 8394879 GAAAGCAGCTTTAGTCCTTCTC 59 8394676 8394694 TTGGATCCCAGAAGTCACG 59 NA Drosophila melanogaster 61 CSN8 FBgn0261437 FBtr0079646 3 1 1 82 2L 8365315 8365398 GGAGGATCTTCTAAATAAGCAACG 59 8365435 8365457 GTAGATTGTGCTGGTAAATGGAC 59 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079537 1 1 4 87 2L 8030765 8030783 ACATTACGCGTGAATACCA 57 8030833 8032072 CCTACGCTATATCTTTGCGA 57 NA InUTR Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 3 2 2 61 2L 7817638 7817737 AACCTGTATAGATTGTCAGGACTC 59 7817755 7817775 ATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7214 FBgn0031940 FBtr0079499 2 1 1 63 2L 7744769 7744787 AACCCAACTTCAACACCCA 59 7744607 7744625 GAACATGACTACGGCAACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 1 2 2 80 2L 7712223 7712308 CCGATGAATTCTTCCACTTGG 59 7712347 7712368 TTAATTGTTCCCATACCATGCC 59 NA Drosophila melanogaster 61 CG5177 FBgn0031908 FBtr0079441 2 1 1 81 2L 7406174 7408151 AACTGGGACAAAGGTGAGG 59 7408194 7408214 AGACGATCTTCAGGTTCTTGG 59 NA Drosophila melanogaster 61 CG5155 FBgn0031905 FBtr0079438 3 1 1 101 2L 7390613 7390692 TTACCATGCACCAGAGTGG 59 7390757 7390775 GGATATTGCGCAGACAACC 59 NA Drosophila melanogaster 61 CG5155 FBgn0031905 FBtr0079438 2 1 1 101 2L 7390611 7390691 CATTACCATGCACCAGAGTG 59 7390755 7390773 ATATTGCGCAGACAACCAG 58 NA Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0113027 1 1 2 98 2L 7012423 7012445 GTTATACCCGGCATTATATTGGG 59 7012503 7013667 GATGCGGAAGCATTCATCG 59 NA Drosophila melanogaster 61 wee FBgn0011737 FBtr0079371 1 1 1 128 2L 6912050 6912068 TTGACTCCAAGAGCAAGCT 59 6911844 6911959 GAAGATTGACTCGTTGCTCG 59 NA Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079380 3 1 2 129 2L 6800107 6800502 CCCAACTTATCCATGTGGC 58 6799996 6800015 GATAGATGCATCCGATCGAG 57 NA InUTR Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079337 2 1 2 87 2L 6775821 6775839 TTACGTACAGCTGACCCTG 59 6775889 6775978 AATGCTCTCGTCAAACTTGG 58 NA Drosophila melanogaster 61 CG9500 FBgn0031804 FBtr0079280 2 1 1 84 2L 6358072 6358150 GCTATCAGAAACAAACCCGA 58 6358007 6358027 CAGTACTAGCATTGGATTGGT 57 NA Drosophila melanogaster 61 CG9497 FBgn0031800 FBtr0079283 3 1 1 81 2L 6347836 6347858 GAAGATCACCTATTACGAAGTGC 59 6347619 6347801 GTGATAAAGTTTAGGTCCGAATCTC 59 NA Drosophila melanogaster 61 CG31643 FBgn0051643 FBtr0079182 1 1 1 81 2L 6039936 6040021 TCGCAAGAAGCTAAAGAATACG 59 6040061 6040081 AGAATTGAGATCGTTGCAGTG 59 NA Drosophila melanogaster 61 CG31644 FBgn0051644 FBtr0079159 3 1 1 91 2L 5818276 5818371 GTTTAAGTTTCCCATGCATGAC 58 5818206 5818225 AAAGAAGTGGAGCTAACAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11034 FBgn0031741 FBtr0079140 3 1 1 81 2L 5808613 5808632 AATGTCCACTACCAGCACTC 59 5808676 5808754 CGGTGTAGGTCTGTTCCTC 59 NA Drosophila melanogaster 61 H15 FBgn0016660 FBtr0079076 1 1 1 80 2L 5414197 5415361 GTGACTTTGATAGGGATCCCA 59 5415403 5415421 GATCGGGAAAGAATCGCAG 58 NA Drosophila melanogaster 61 TotM FBgn0031701 FBtr0079073 2 1 1 118 2L 5329905 5329981 TATTTGAGCTGCCTTATGGTC 58 5330060 5330079 ACCGAAGAATCACCATACAC 57 NA Drosophila melanogaster 61 CG14022 FBgn0031700 FBtr0079080 2 1 1 83 2L 5328369 5328579 CATGTACAAGGCCTGAATCTC 58 5328306 5328324 TTTGCTGTTCTTCACCCAG 58 NA Drosophila melanogaster 61 CG14035 FBgn0031685 FBtr0079020 1 1 1 80 2L 5103587 5103982 CAGTTGCAAGACAGCAGTG 59 5104023 5104044 CGATGATTCGAAAGATTCGGAG 59 NA Drosophila melanogaster 61 Jon25Bii FBgn0031654 FBtr0079055 2 1 1 61 2L 4952537 4952555 TGGACTCCCAGATCATCAC 58 4952494 4952512 GGTGATCACATCGGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL24 FBgn0031651 FBtr0079058 2 1 1 91 2L 4944854 4944934 ACCAATTGAGGACTGGAGC 59 4944781 4944800 TAACCTGGGTGACAATTCCC 59 NA Drosophila melanogaster 61 CG15629 FBgn0031630 FBtr0077383 3 1 1 80 2L 4813499 4814780 GAAAGTTAAAGGACATCTCCGG 59 4814819 4814839 AGTTTAGGGCAATCAAACGTC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 5 5 85 2L 4469758 4469844 CAACAACAGGTGGAACACG 59 4469691 4469709 ATGGAGTGCGAGATGTGTC 59 NA Drosophila melanogaster 61 CG15436 FBgn0031610 FBtr0077442 2 1 1 93 2L 4463778 4463852 ATACATCAGGGATAATGGCGG 59 4463907 4463925 ACTCTGGTTCTTCGTCTGG 59 NA InUTR Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0077453 3 1 2 166 2L 4456511 4456734 GCAGATTACGTTTAGGAAACG 57 4456312 4456330 CAGTATAAAGGCGTTCGGT 57 NA InUTR Drosophila melanogaster 61 CG42464 FBgn0259954 FBtr0300300 2 1 1 187 2L 3699543 3699626 GGAATCAGCAGATGAAATCTG 57 3699774 3699793 AGAGATCTTCGCAAATTGCT 58 NA Drosophila melanogaster 61 CG10031 FBgn0031563 FBtr0077544 2 1 1 80 2L 3698880 3698898 AACCTGGAAATCCATCGGG 59 3698753 3698838 ATTTGGGATCTGGTACCAGTC 59 NA Drosophila melanogaster 61 CG9663 FBgn0031516 FBtr0077604 3 1 1 80 2L 3297496 3297517 GAACTTAGTGCCGTTATTGGAC 59 3297379 3297458 GCCATATGTTGTGTATCCTGAC 59 NA Drosophila melanogaster 61 CG17259 FBgn0031497 FBtr0077667 2 1 1 60 2L 3036157 3036175 GAGCAGTTCGTACTGACCT 59 3036115 3036134 TCATCTCGTCCATCATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gammaTub23C FBgn0260639 FBtr0077641 3 1 1 95 2L 2973283 2973301 ACGACGACCACTACATACC 58 2973357 2973438 GATTGTAGAGCTTGGAGTAGAC 58 NA Drosophila melanogaster 61 Cyp309a1 FBgn0031432 FBtr0077749 3 1 1 81 2L 2564214 2564234 GAAGCTGGTCGAGTATATCGA 59 2564102 2564175 CGTAAATCGATAGGCAAGATCTC 59 NA Drosophila melanogaster 61 CG9867 FBgn0031421 FBtr0077767 2 1 1 86 2L 2382289 2382359 CACCCATAATCCAAGGCTG 58 2382409 2382427 GCTTGTAGGGAATCTGCAG 58 NA Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 2 2 2 141 2L 2263744 2263822 GAATGGGCCAATCATCTCC 58 2263925 2263945 AGCTATTGATTTCCCGATACC 57 NA Drosophila melanogaster 61 CG17239 FBgn0042186 FBtr0077805 1 1 1 60 2L 2252067 2252085 CACATTCTTCGGTGGTCAG 58 2252025 2252045 GTCGTATTCCTCGTGTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 2 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938561 1938580 TTGATCCATCCAAGTTGGCT 59 NA Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 2 1 1 140 2L 1502038 1502056 TCTCATCCTCGACACAAGC 59 1501856 1501934 GTTTCCACAGGAACATCCC 58 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 2 15 15 96 X 2567052 2567070 TTCTTCGATGAGCTACGCA 59 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085589 3 1 2 105 3R 25881511 25881593 TAAGTTAATAGGCGGCAGCA 59 25881425 25881444 CATCAGTTGCTTCTTGGTGG 59 NA Drosophila melanogaster 61 CG13654 FBgn0039290 FBtr0084805 1 1 1 80 3R 21036522 21036601 CCAAGGATCAGAGATTTAAGGT 57 21036639 21036660 AAGGTCCTTCAATGGTAATACG 58 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0302855,FBtr0084300 2 2 2 80 3R 18503493 18503512 CGGTGTTAAGCAATAATCGC 58 18503554 18503633 TGTCCACAGAGAACTGAGAG 58 NA Drosophila melanogaster 61 CG3942 FBgn0038008 FBtr0082561 2 1 1 60 3R 8080715 8080733 AATTAAGGCAGGGAACCAG 57 8080756 8080775 GACACATAGATTGGTCACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18744 FBgn0042101 FBtr0114516 1 1 1 81 3R 3623145 3623163 GGAACCAACTCCTCCAGTC 59 3623020 3623103 GAAATTCGAAGCCAAAGATGTG 58 NA Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0273439 3 1 2 105 3R 1883079 1883099 GACCTTGAACCTATACAGCGA 59 1882589 1883012 ACTGAGCCAGCTCTTTACG 59 NA Drosophila melanogaster 61 CG30196 FBgn0050196 FBtr0071927 3 1 1 84 2R 18542733 18542751 CTACCCACGTGAAATCGGA 59 18542575 18542686 CGAATGGGATTACAGCAGAG 58 NA Drosophila melanogaster 61 Obp56a FBgn0034468 FBtr0086476 2 1 1 93 2R 15585327 15585587 TTGGATCGTCCCTTAATCTGAG 59 15585640 15585659 TCCTCCTCGGTAAGTTTCAC 59 NA Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 2 2 2 80 2R 15332875 15333441 GGAGATACCATCCCACGTC 59 15332813 15332833 ATTTCGGTAGAACTGTTGGTG 58 NA Drosophila melanogaster 61 CG14492 FBgn0034283 FBtr0086818 1 1 1 90 2R 13781781 13781799 TACCTGCTCCCTAATTGGA 57 13781648 13781666 TAATATCATCGCTGCTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG10933 FBgn0034264 FBtr0086860 2 1 1 80 2R 13611386 13611464 GGAACACGGTCTAAGTCCT 58 13611505 13611526 TTCACCTCTAGTTCATCATCCA 58 NA Drosophila melanogaster 61 CG34459 FBgn0085488 FBtr0112765 1 1 1 109 2R 12713108 12713127 CGAATACGTGGAGTATTGGC 58 12713257 12713275 ATCATTCTCTTGTGCTGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12869 FBgn0033943 FBtr0087496 3 1 1 99 2R 10480375 10480462 GATCTCATTGGGCTCAAGG 58 10480525 10480543 ATCGTAGTTCGTTGATGGG 57 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 2 4 4 198 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9876939 9876957 TATTCCAGGCCACCATACG 59 NA Drosophila melanogaster 61 CG17050 FBgn0033831 FBtr0087719 2 1 1 80 2R 9279069 9279091 CAAGAGGAAAGTCACTATCAGTC 58 9278825 9279032 TTCAAGATCATCCATATGCTCG 58 NA Drosophila melanogaster 61 qvr FBgn0260499 FBtr0114575 2 1 1 84 2R 7334860 7335041 AGAGATCACCGTACGAGGT 59 7335089 7335107 ATCATGCACACGTGATCGA 59 NA Drosophila melanogaster 61 CG30340 FBgn0050340 FBtr0088535 2 1 1 89 2R 5488019 5488038 TGCTTATCTGCTACATAGCC 57 5487890 5487908 TATAGCTCACTGTCAGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Prp38 FBgn0050342 FBtr0088582 3 1 1 60 2R 5031895 5031915 TGGAGTTTATCAAGAACGAGG 57 5031937 5031955 CGTAGATAGAAGGCTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fmo-2 FBgn0033079 FBtr0086148 2 1 1 80 2R 2532045 2532063 TAAAGGCCCACATCAAGCT 59 2531873 2532001 GGTCCCATACGTAGACCTC 58 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 1 2 2 133 2L 20660380 20660461 TTCTTCGATGTGGACACCC 59 20660265 20660283 AAATCCGGCGTATAGGTGG 59 NA Drosophila melanogaster 61 CG16853 FBgn0028941 FBtr0080508 2 1 1 60 2L 13542867 13542888 GATTTCAGAGCTGGATGATGAG 59 13542909 13542927 TTTCTGACCCTTAACTGCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 3 2 2 89 2L 13387100 13387184 TTTAGACGGATTGGAAAGTCTG 58 13387032 13387050 TTCATCGCTGTTTGTGCTC 59 NA Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0301439,FBtr0078001 1 2 3 80 2L 756016 756034 AGAACCTCATCGTGGTCTC 58 756075 756683 TGAACATGTGATTGTTCAGTCC 59 NA Drosophila melanogaster 61 Ipk2 FBgn0031267 FBtr0078074 3 1 1 60 2L 573292 573312 TCGACTTTGCTCATGTTTACC 59 573252 573271 CCGAACATGTAGTTCTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL10 FBgn0031231 FBtr0078124 2 1 1 143 2L 203880 204002 TGATACAAAGAAGCCTTTCCCT 59 204106 204124 GATATTTCGGCTGCGTGAC 59 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 1 1 1 62 3L 19807934 19807952 TCCTCACTGGAACAGTGTC 59 19807820 19807908 CTTAACGGGCAACATGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Sfp33A3 FBgn0259964 FBtr0300310 1 1 1 90 2L 11840047 11840070 CCAAGACCTATAACAACTACTGTG 59 11840118 11840137 CTTTCATTGCACTGTTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Slbp FBgn0041186 FBtr0085409 2 1 1 164 3R 24978771 24978789 GCATCCTCCATTTCGATCG 58 24978564 24978582 GGACTCCAGATTACCGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31357 FBgn0051357 FBtr0084735 2 1 1 60 3R 20655069 20655087 GAGGTCGAGGATGACTTGG 59 20655027 20655045 TGTCTATGCACCAAAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18132 FBgn0031345 FBtr0077919 2 1 1 60 2L 1517310 1517328 GAGTGTGAAGGCAAGATCC 58 1517268 1517288 CACTCTCAGCTTAAGTATCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mira FBgn0021776 FBtr0083847,FBtr0083848 2 2 2 60 3R 15758830 15758848 GCTGACTTTGACCAACACC 59 15758788 15758807 GGACTTCTTTAGACGCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-Ic FBgn0028644 FBtr0080801 3 1 1 187 2L 16034309 16034583 AAATGGAGGTGGTTGAGCT 59 16037161 16037179 CTTCTCCGTCTGGTAGGTC 58 NA Drosophila melanogaster 61 CG14265 FBgn0040393 FBtr0070541 1 1 1 99 X 3130633 3130651 TGATCTGTGCCCTGTACAG 59 3130552 3130570 GTTGTCGAAGTGCTTGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vang FBgn0015838 FBtr0088566 1 1 1 116 2R 4991313 4991398 ATATGACAGGAGACGGCAG 59 4991478 4991496 TTTGCTCCGAGGTATTCCC 59 NA Drosophila melanogaster 61 CR11700 FBgn0029856 FBtr0070931 2 1 1 60 X 6176935 6176953 CATCACCTTGGAGGTCGAG 59 6176893 6176913 GTCCTGTATCTTGGCTTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 1 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0077267 2 1 2 96 X 20902682 20902700 GTCTACTTTGACGAGCTGC 58 20902551 20902623 TAGGAAAGAACCTGTCGACC 59 NA InUTR Drosophila melanogaster 61 out FBgn0259834 FBtr0074682 1 1 1 91 X 19205650 19205734 AATTCTTGGTATCTTGACGGAG 58 19205580 19205600 CTAACCAAAGGAGTAAAGCCA 58 NA Drosophila melanogaster 61 CG32537 FBgn0052537 FBtr0074687 2 1 1 175 X 19170265 19170285 ACGTCATAAAGATTAGCAGCC 58 19169361 19169439 CTCGAGATCGGCATTTACG 58 NA InUTR Drosophila melanogaster 61 CG32551 FBgn0052551 FBtr0290003 3 1 1 60 X 18333167 18333188 ACTTTGAGGAACTCAAGAACCT 59 18333208 18333227 ACTTCATTGGGTGAATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 3 3 3 89 X 16310687 16310705 AAACTGGAAGAGTCCAAGC 57 16310758 16310836 TATATCCAGCCGTAGAGCA 57 NA Drosophila melanogaster 61 Eo FBgn0030597 FBtr0073975 3 1 1 60 X 14812141 14812160 CCATAAGACCTACTCTCGCC 59 14812100 14812122 CTTATTCGGTTGAAGATAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 3 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 3 2 2 129 X 11885108 11885128 GTAATCGATCGACACAAGGAC 59 11884928 11885017 TCTTGTCGCCAGATGAGTG 59 NA Drosophila melanogaster 61 CG15739 FBgn0030347 FBtr0073569 3 1 1 188 X 11768211 11768229 CATCAAGTTCGAGGGACTC 57 11768501 11768520 GTCAGATTGAAGTCCACGTC 58 NA DesignNoJunction Drosophila melanogaster 61 rtv FBgn0261277 FBtr0073470 3 1 1 88 X 11047386 11047660 TTCAATCGATGGCCTTCTG 57 11047316 11047334 TTGCATTGAAGGTGAAGGG 58 NA Nonspecific Drosophila melanogaster 61 l(1)G0289 FBgn0028331 FBtr0071470 3 1 1 105 X 10252658 10252740 CGTTTACGTGCCTATGGTG 59 10252513 10252531 GTATGAATGGCGGTAGCCT 59 NA Drosophila melanogaster 61 CG15250 FBgn0030165 FBtr0071428 1 1 1 78 X 9861074 9861095 GTCACCAATATCTCAAAGTCGT 58 9860857 9860875 TAAAGAAGAGCACGAAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Corp FBgn0030028 FBtr0071179 3 1 1 90 X 8164893 8165207 TCATCTCCCAAGCCATGAC 59 8164821 8164839 GCCTCAAACACGTAGTCCT 59 NA Drosophila melanogaster 61 CG2120 FBgn0030005 FBtr0300914 1 1 1 60 X 8030076 8030099 GATCTATTGGAACTTGTGAATGGG 59 8030186 8030204 TTGGCTTATGTTCCGTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Rab39 FBgn0029959 FBtr0071072 3 1 1 146 X 7629358 7629804 AATTCGCCGAGTTATCCGA 59 7629914 7629932 TCCGGTAGTAGGACTTGGT 59 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 3 4 4 80 X 5317036 5317157 TTAGAACACTACCAGACACCT 58 5317199 5317217 CTCATAGCACCAGATGTCG 57 NA Drosophila melanogaster 61 rst FBgn0003285 FBtr0070562 1 1 1 82 X 2849623 2849641 GATTGTCAAGTGCGAGGTG 59 2849220 2849577 GGAAACTGGGAGCATAGCT 59 NA Drosophila melanogaster 61 CG18823 FBgn0042146 FBtr0070171 3 1 1 60 X 884617 884637 GTTTAGAAACGATATCCCGGC 59 884658 884677 TAGGTTTCTCACCCAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3699 FBgn0040349 FBtr0070186 1 1 1 60 X 840814 840832 CCAAGGCAAGTTTCACCAC 59 840772 840790 GTCAGATTGTGCTTGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40572 FBgn0085747 FBtr0114197 3 1 1 176 U 8735312 8735331 TGTGGTCATATGATTCTGGC 57 8735470 8735488 TGTCGTAGAACAGCTAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41561 FBgn0085692 FBtr0114141 1 1 1 80 U 4051909 4051929 GATTTGGTCGATTCGTAAGAC 57 4051791 4051867 AGCACGGAATACATTTGCA 58 NA Drosophila melanogaster 61 CG11360 FBgn0039920 FBtr0089091 3 1 1 77 4 701736 701754 TGTAGCAGAAATAGTGGGC 57 705237 705258 GGTGTCTTAATGTAAGTGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816,FBtr0085815 2 2 2 84 3R 27440096 27440114 ATTATCTGGATCGCGAGGC 59 27440160 27440236 AGGTCAAACACCTTTATGCAC 59 NA Drosophila melanogaster 61 CG18673 FBgn0040629 FBtr0113330 3 1 1 82 3R 27089282 27089358 CTTTACGTACAATGGATCTCTGAC 59 27089399 27089417 GATAGTCCAGAACGTCGGG 59 NA Drosophila melanogaster 61 Jon99Fi FBgn0039778 FBtr0085652 3 1 1 68 3R 26314914 26314932 ATCATCGGAAACACCTGGG 59 26314964 26314982 GTTGATGGTCACTCCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301746 3 1 2 85 3R 25662483 25662501 GACATGGTGCATTATGCGG 59 25662550 25662648 TACTGTGCTGGACTCTTGC 59 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 3 3 3 109 3R 24168519 24168608 CGAGATACCAGAGGTATCGA 58 24168680 24168698 GATCTTTGCCTCGATCACG 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 3 5 5 125 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 TwdlK FBgn0039439 FBtr0085053 1 1 1 60 3R 22453825 22453843 AGTACGATCAGTTGGGAGG 58 22453783 22453801 TTCAGGGTAGAGGCAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 3 1 2 124 3R 20483310 20483328 TAGTTCCGCTACCGAAACC 59 20484125 20484232 TATCGGCTTTATATTGCCGGT 59 NA Drosophila melanogaster 61 CG5789 FBgn0039207 FBtr0089906 1 1 1 80 3R 20367131 20367151 CCTTAATACGGATGACCTGAC 58 20366965 20367090 AACCATTGATCCTCCAAACG 58 NA Drosophila melanogaster 61 CG13407 FBgn0038931 FBtr0084181 1 1 1 86 3R 17929217 17929802 AATTATGCTCAAACGCAGC 57 17929852 17929870 GTGTCCTTGGTGGTAATGG 58 NA Nonspecific Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 2 1 1 186 3R 17694985 17695003 GGAACCTGAGATCAAGGTG 57 17694704 17694781 TAATTCAGCTTGTTGTTCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31195 FBgn0051195 FBtr0302188 2 1 1 80 3R 16584813 16585106 TGGAATTCAAGGGTGTGGT 59 16584751 16584769 GTTCGTAGTACCAGTCCGG 59 NA Drosophila melanogaster 61 CG10877 FBgn0038804 FBtr0083950 2 1 1 60 3R 16388722 16388741 CAAGACCAACAAGGATCGTG 59 16388681 16388701 CATTTGCTCTAGGATTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14300 FBgn0038643 FBtr0100288 1 1 1 121 3R 14519306 14519386 GAAGTCTGTTGTTGCCCTG 59 14519203 14519222 GATGCGTATAGGTCTGTCCA 59 NA Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 2 2 2 80 3R 12852789 12852809 ACTTTGATTCCCTGACCAGAG 59 12852851 12852930 AGTGCTTGATCTGTCGGTC 59 NA Drosophila melanogaster 61 ear FBgn0026441 FBtr0083082 1 1 1 96 3R 11147313 11147402 GAAACCCAAACGAGTGGTC 59 11147460 11147480 TCGGTTGCGAAAGTAAATCTC 59 NA Drosophila melanogaster 61 GstD3 FBgn0010039 FBtr0082570 2 1 1 60 3R 8198926 8198946 CGATTTCATCAAGATCAACCC 57 8198966 8198986 GGTGAAACCATTGTCTACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pglym87 FBgn0011270 FBtr0082620 3 1 1 60 3R 8058306 8058324 TTCTCGAAGTCATCATCCG 57 8058264 8058282 TCACAATCCTGTACTTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4830 FBgn0037996 FBtr0082625 2 1 1 80 3R 8035236 8035325 ACAGAGTTCTTCTATCAGCCC 59 8035176 8035194 AGTAGTTCCGGATGAGGTG 58 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273,FBtr0302571,FBtr0301310 1 4 4 113 3R 6590906 6590975 GACGACTGCTCATTGATCC 58 6591052 6591070 AATGTCCAGGATCTCGGTG 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 2 4 4 94 3R 5401288 5401373 ATACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091946 3 1 2 60 3R 5181367 5181391 GATGAGTTTACTATCCTGATGATCC 58 5181408 5182147 TGCTTATTTACAAATGCGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Arf84F FBgn0004908 FBtr0081838 2 1 1 80 3R 4166952 4167031 CGCATATTACTGCTAGGTCTG 58 4167073 4167091 GATGGTGTCTATGGGTTCG 57 NA Drosophila melanogaster 61 CG42544 FBgn0260713 FBtr0301214 2 1 1 223 3R 3130440 3130458 CCGCGACCAATAGATTTGG 59 3130645 3130663 AAACATGGCCATAAGTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 3 2 2 112 3R 1082049 1082070 GTGCGCTATTTAATTGATCAGG 58 1081649 1081976 TCTTCGTATACATGGCCCT 57 NA Drosophila melanogaster 61 CG34425 FBgn0085454 FBtr0112726 3 1 1 60 3R 331349 331373 CGGTTAATTAATTCTCTTCTGGAGG 59 331313 331334 CTTGGTGCTCTTTCTCAAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32028 FBgn0062463 FBtr0076660 1 1 1 60 3L 8434165 8434186 GAAACGAAACTAACGTGAAGTC 58 8434126 8434145 TTTATTCGAGAGTCCGAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12377 FBgn0037168 FBtr0078545 2 1 1 94 3L 22497515 22497751 TTCGACAACCATGACATGG 58 22497439 22497458 CTAGCATGAAGTAGCAGGAG 57 NA Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450,FBtr0078451 2 2 2 242 3L 21739978 21739996 CAGAGGGAGTTCTCCTTCC 58 21739702 21739774 CTCCATGTCCAGTTCAATCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 1 2 2 80 3L 20237606 20237625 ATGAGTTTGTCTGGAACTCG 58 20237666 20238046 TATGCCCACCTGTATAATGAG 57 NA Drosophila melanogaster 61 CG7770 FBgn0036918 FBtr0074894 3 1 1 261 3L 19916968 19916986 TTGAGTCGTACCAGAACCT 58 19917298 19917400 TCCTTCTCCATGTTCTCCA 57 NA DesignRelaxed Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 3 1 1 268 3L 19909947 19909965 GACACCTACACGAGGTTCC 59 19910196 19910284 TCCTTATCCTTGCCCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 2 2 2 84 3L 17847366 17847454 TCGAATACGCAATTGGCTC 58 17847300 17847318 AAACTGCTCATCGGATTGC 58 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 2 4 4 82 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391564 17391586 CAGAATGGAGTTAGAAAGGTCAG 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 1 4 4 80 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391566 17391587 GAATGGAGTTAGAAAGGTCAGC 59 NA Drosophila melanogaster 61 CG13731 FBgn0036717 FBtr0075237 2 1 1 87 3L 17382785 17382926 GATCTTCGAGTTCAACCGG 58 17382716 17382734 GGATCAGGCCTAAATGCAG 58 NA Drosophila melanogaster 61 CG6485 FBgn0036706 FBtr0075249 3 1 1 60 3L 17313560 17313581 CGAGACCATCAAGATAGATCCA 59 17313521 17313540 GAACATGGTGTAGAACTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 a10 FBgn0011293 FBtr0075290 3 1 1 102 3L 17016489 17016559 TGTTGAAGGAGATCCTGCC 59 17016405 17016423 TTGTCGATGAGATGACGGG 59 NA Nonspecific Drosophila melanogaster 61 CG4573 FBgn0036629 FBtr0075411 1 1 1 80 3L 16409005 16409026 AATGAGAGTCGTACGAAATTGG 58 16408886 16408967 TAGATCTAAGTTGGAGTGTTGC 58 NA Drosophila melanogaster 61 CG13064 FBgn0040796 FBtr0089378 1 1 1 70 3L 16273793 16273811 CTCTCACGAAGATTGCCCA 59 16273845 16273863 AGGAACATGTTCGTAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-G FBgn0036228 FBtr0076066 3 1 1 60 3L 11946338 11946360 GTACTTCAAGAAAGTACTCTGGC 59 11946245 11946264 ATAAGGACGTCTTGAACGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG33268 FBgn0036177 FBtr0076145 1 1 1 72 3L 11584170 11584188 TACCACGACAACTTCGTCC 59 11584116 11584134 GTGCTCCTTCTTGGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33696 FBgn0053696 FBtr0091684 1 1 1 94 3L 9638578 9643455 GAATACAAAGAACAACTGGCC 57 9643511 9643529 GTACAGGTGTTCAGAACGG 58 NA Drosophila melanogaster 61 RpS17 FBgn0005533 FBtr0076479 3 1 1 116 3L 9422355 9422374 AAGTACTACACTCGCCTGAC 59 9422199 9422276 CAAATGGGTGACATAGCCG 59 NA Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 3 1 1 68 3L 9420373 9420393 TCAAGACCTCAATGAAATCCC 58 9420423 9420503 CTCGATTGATGCACTCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34426 FBgn0085455 FBtr0112727 1 1 1 80 3L 8796300 8796320 GAAGACACCTATTGCCAAGAG 58 8796360 8796445 GTAGATGTAGCTAGTGCACAC 58 NA Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 1 1 1 172 3L 8319126 8319263 AAGTACTTCGTTGCCATCG 58 8319398 8319417 TTAATGCCGTAGTTGAAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG7506 FBgn0035805 FBtr0076822 3 1 1 88 3L 7634114 7634193 AAATCAAGACTACTTTCCGACC 58 7634047 7634065 CAGAGGTCGTTTGTTGACC 58 NA Drosophila melanogaster 61 CG42661 FBgn0261537 FBtr0302559 3 1 1 102 3L 7459441 7459513 TAACCGCAGGAATTAATGGTG 58 7459572 7459595 GACAGGGATAGGCTTATAATAAGC 58 NA Nonspecific Drosophila melanogaster 61 CG12009 FBgn0035430 FBtr0073053 2 1 1 117 3L 3296210 3296228 CGACTGCCAGATCTTTCAC 58 3296309 3296386 GGTGAACGATTCCTGACTG 58 NA Drosophila melanogaster 61 CG13801 FBgn0035332 FBtr0072888 2 1 1 60 3L 2362522 2362541 GGCTACAAGATCACCTTCAG 58 2362562 2362582 CGGTGAATAGCATGATTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 1 2 2 111 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965412 1965430 ATATTGACGCACCAACTCC 57 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 2 6 6 80 3L 982095 982186 GCCATAATGGTTGTTATGACG 57 982228 982246 CAGACCATAGAGATGCAGG 57 NA Drosophila melanogaster 61 CG13885 FBgn0260471 FBtr0100297 3 1 1 153 3L 391610 391628 CCTATACACTCGCATCACC 57 390988 391496 GCACTTCATAACTGTAGTAGGG 58 NA Drosophila melanogaster 61 5SrRNA:CR33444 FBgn0053444 FBtr0086436 1 1 1 60 2R 15620149 15620167 ATACATCGGTTCTCGTCCG 59 15620107 15620125 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12849 FBgn0035068 FBtr0072376 1 1 1 81 2R 20685644 20685662 AACCGCACCTACAAGTACC 59 20685707 20685774 TCAGCTGGAATCTGGTCTC 58 NA Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295,FBtr0072296 3 2 2 60 2R 20362286 20362304 CCAACATCTCGCAGTACTC 58 20362328 20362346 TCGCACAGAAGATTGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tal FBgn0023477 FBtr0072141 2 1 1 73 2R 19827985 19828006 GATGTCGGTATTACAGGAACTC 58 19828039 19828588 TGTTGATGGCTTCAAAGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072030 1 1 2 112 2R 19273830 19273927 TTTGTGAGCTGCGAATTCC 59 19273736 19273754 GGAATTGGGCTATCTTCGC 58 NA InUTR Drosophila melanogaster 61 CG30417 FBgn0050417 FBtr0072041 2 1 1 60 2R 19214366 19214385 AGTTCGACATCTGCAAACTG 58 19214325 19214343 CTGGCCAAATAATCACGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 3 1 1 111 2R 18841031 18841049 GGAAATCTTGACGGTAGCG 58 18839577 18840956 AACAATGTTGATCCGACGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 3 4 4 139 2R 18693056 18693180 CCACTAAAGTTACAGTCAAGTCC 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928,FBtr0300929 1 2 2 60 2R 18001128 18001147 CGTTTGCATTGCACTTAGTG 58 18001168 18001253 TCCAAACAAATTCAGCGTCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10306 FBgn0034654 FBtr0071670 1 1 1 60 2R 17572951 17573036 GCTACAACCCAGATCATCTG 58 17573058 17573077 TTGTTCTTAGCCTGATCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 IM4 FBgn0040653 FBtr0071559 1 1 1 113 2R 16756720 16756738 CTTCTCTTGGCCATGTTCG 58 16756566 16756587 TCTCTAATCCTAACCAGTACGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 2 2 2 169 2R 16150046 16150124 ATTCAGCTACAGGCCATGG 59 16149895 16149914 TTCATCGTCACATTGTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 3 3 3 81 2R 14882582 14882600 AATGTCACCCTACAACGGT 59 14882642 14884408 CCATAATTTGACCTGATGTGGG 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 2 4 4 81 2R 14529689 14529707 CGAGTTGCAGTTGATTGGT 58 14529562 14529647 GTGGAATGATTGCATAATGCTG 58 NA Drosophila melanogaster 61 IM3 FBgn0040736 FBtr0086665 1 1 1 71 2R 14275696 14275714 TTCCTATCACTCGCCTTCG 59 14275820 14275838 GACATTGCCAGGATTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30108 FBgn0050108 FBtr0273298 2 1 1 61 2R 13557120 13557192 TATCAGGAATGCGTCAAGC 58 13557214 13557235 GGATCTATCTCTTGCAAATCGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 2 2 2 80 2R 12945341 12945423 GGCATCTCTTATATGTCACCC 58 12945462 12945483 ATCCTCAGGATACATTGTAGTG 57 NA Drosophila melanogaster 61 CG8311 FBgn0034141 FBtr0087121 1 1 1 92 2R 12475169 12475187 TCGGGAATTCTAGCTGTCG 59 12475003 12475113 GGATCGGGAAGATCTTCCC 59 NA Drosophila melanogaster 61 CG33017 FBgn0053017 FBtr0087135 3 1 1 200 2R 12160132 12160213 TTGGGAAACTTGGAGGAGG 59 12160377 12160395 TCTTTCATGGTGCACACCT 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 3 3 3 83 2R 11881891 11881975 ATTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 CG8207 FBgn0034035 FBtr0087342 1 1 1 80 2R 11566008 11566092 AACATCAGGTACCTTCAGGA 58 11565947 11565966 ACCAGCTCTAATCTGATCCC 58 NA Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 3 1 1 88 2R 11181048 11182511 AGACCATCATCAACTATTCCG 57 11180980 11180998 CTGGACATGGTTCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 alphaPS4 FBgn0034005 FBtr0087371 2 1 1 80 2R 11148510 11148532 CTAAATTTACACCCATAGCCCTG 59 11148571 11148649 AATCCTCGCAGAAATCTCCA 59 NA Drosophila melanogaster 61 CG30069 FBgn0050069 FBtr0087530 2 1 1 86 2R 10075544 10075622 CAAACTGAAGATAACGTTGACG 58 10075669 10075687 TTGCTTGGGAATGTTTCCA 57 NA Drosophila melanogaster 61 CG33007 FBgn0053007 FBtr0087778 3 1 1 60 2R 9034171 9034190 AGCATCGATTATCACAGCAG 58 9034130 9034149 GCTATCACTAGATCTTCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13165 FBgn0033707 FBtr0087892 1 1 1 81 2R 8184239 8184257 GAATTGGTGACCGAAGTGC 59 8184301 8184384 GGAACTCAGAGCTCTTCTCC 59 NA Drosophila melanogaster 61 CG13197 FBgn0062449 FBtr0088078 2 1 1 80 2R 7578901 7579008 AAGGACATACCAGACAGATGG 59 7579047 7579068 CACCTTAAAGGCTATGAAACGA 58 NA Drosophila melanogaster 61 CG34228 FBgn0085257 FBtr0112421 2 1 1 101 2R 7539485 7539503 CGTTTACATCACGTTGCCC 59 7539566 7539654 TGTATGGATGGACTGTATGGG 59 NA Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088354,FBtr0088355 3 2 3 109 2R 6244180 6244198 GATGCTTTGCGACAGACTC 59 6244089 6244107 CCTTATCTTTGTCGCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30376 FBgn0050376 FBtr0088800 3 1 1 61 2R 4151180 4151198 CCATACAACTCCTACCGCA 59 4151137 4151155 AAGATCATGTTGTGCCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn43Ad FBgn0044011 FBtr0089053 1 1 1 97 2R 3041583 3041601 TCTCCTGGAGCTACAGGAG 59 3041447 3041465 ACGGGTGATTGATGACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34215 FBgn0085244 FBtr0112408 2 1 1 82 2R 2718993 2719067 AGAAATCCAATCATGTGGTGC 59 2718931 2718949 CAGGGTAATCTGCGTTTGG 58 NA Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942 2 1 2 162 2L 22129887 22130107 AAACCACGTACATGGTAACAC 58 22129745 22129763 TACTACCAGTAGTCCGCGT 59 NA InUTR Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485 1 1 2 145 2L 21233891 21236652 ATTAATTATCCGCCTCTGGGT 59 21233766 21233784 CTTAACTTGGTCTGGCCCA 59 NA InUTR Drosophila melanogaster 61 Fs(2)Ket FBgn0000986 FBtr0081392 1 1 1 80 2L 20737380 20737398 ACTGATGTACGACTCCAGC 59 20737442 20737528 GCCTCGGGAATTATATCGC 58 NA Drosophila melanogaster 61 CG17470 FBgn0032869 FBtr0081406 2 1 1 60 2L 20642496 20642516 GATCCAAAGGATCTGGAGGAG 59 20642456 20642476 TCTACTTGTCGTATCGAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081317,FBtr0081316 2 2 2 74 2L 19795574 19795592 ACAAAGACGAACTGACCAC 58 19795022 19795040 ATTTACGAGTGGCACAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13082 FBgn0032803 FBtr0081251 2 1 1 60 2L 19539239 19539257 CTTCAATCATCCCGGATCG 58 19539280 19539299 ATAGCTATCGCCTCTCAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31815 FBgn0051815 FBtr0080870 3 1 1 60 2L 16606933 16606951 GTCATTGTTCAGACACCGT 58 16606971 16606993 CCCTGACCTTACCTATAATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18480 FBgn0028518 FBtr0080755 1 1 1 159 2L 15631469 15631489 ATGAGGATGATTTGAAGCTGG 58 15631610 15631694 TTCAGAGGAGCTGAAACCC 59 NA Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080693 1 1 2 94 2L 15005860 15005966 ATACGTAGAGACGGCTTCG 59 15006024 15006042 TCTGTACGATCACCTTGCC 59 NA Drosophila melanogaster 61 CG42313 FBgn0259213 FBtr0299711 1 1 1 80 2L 14917208 14917380 CAGATCAGGATTATGGCACAC 58 14917148 14917166 CGACTTGGAAGAGACAGGG 59 NA Drosophila melanogaster 61 CG33640 FBgn0053640 FBtr0091617 3 1 1 117 2L 13528119 13528139 TTGTTCGGTACTCAACAATGG 58 13528218 13528417 GTCTATGTAGGTCACCGGC 59 NA Drosophila melanogaster 61 CG16826 FBgn0032505 FBtr0080464 2 1 1 60 2L 13348201 13348222 CAATACCGTCGTAAATGATCTG 57 13348241 13348261 CTCGTCTATCCGATCATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9928 FBgn0032472 FBtr0080496 3 1 1 60 2L 13142755 13142773 CGAAGGAGGAAGAACACGA 59 13142713 13142732 ACTGTGAACACTATCGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 3 1 1 62 2L 11936908 11937110 AAATAGTGGAATTACTGCGCAG 59 11937132 11937151 CACTTGAAATAAACTGGCCG 57 NA DesignNoJunction Drosophila melanogaster 61 Osi21 FBgn0032359 FBtr0080214 1 1 1 120 2L 11284711 11284898 CATAACAGACGCAACACCT 58 11284609 11284627 AGTAGCGATACGGATCCAC 58 NA Drosophila melanogaster 61 CG6094 FBgn0032261 FBtr0080091 2 1 1 88 2L 10507327 10507345 GACTGCAAATCTACACGCC 59 10507460 10507478 GTAGGTGATCTCCAGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS7 FBgn0032236 FBtr0080007 1 1 1 70 2L 10386733 10386751 ACGATGTAAACATGTCGCT 57 10386785 10386877 CATCAATCGAAGGCAGCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG4537 FBgn0032153 FBtr0113031 2 1 1 132 2L 9891061 9891138 TACCACCTTGCCGAATCTG 59 9891232 9891252 CTCTGCTTGTAGTTCTTGGTG 59 NA Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0300450,FBtr0079699 3 2 3 108 2L 8493820 8493839 AAAGATGACAAACCGATGCG 59 8493077 8493749 TCCTCCATTGGATTGGCTG 59 NA InUTR Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079112 1 1 3 97 2L 5662974 5668956 AACTAAAGGTCAACATGATGCG 60 5669014 5669032 CTTTGCATAGTTACGGGCC 59 NA InUTR Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0079012,FBtr0079015,FBtr0302569,FBtr0100260,FBtr0079014,FBtr0100259,FBtr0079013 3 8 8 261 2L 5067978 5067996 CACTAGCGATCTGAAGCGA 59 5068221 5068307 CAAATCCAGTGCCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077481,FBtr0077482,FBtr0077479 3 6 6 83 2L 4195659 4195745 ATTCCCAGAGCGATATCGA 58 4195594 4195612 TCAGATTGCCGAGGTACTC 58 NA Drosophila melanogaster 61 CG2955 FBgn0031585 FBtr0077468 3 1 1 60 2L 4150360 4150379 GTGTCATTTCATCTGGACCT 57 4150399 4150420 CAGTTCTATGAATGTCATGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sr-CI FBgn0014033 FBtr0077467 2 1 1 111 2L 4122571 4122714 GGTTCAGAGCCAATTGCAG 59 4122786 4122807 GTGAATATCACCTGGAAGTCCT 59 NA Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 1 1 1 61 2L 3578896 3578914 TTACTCCTGCGACATCTGC 59 3578707 3578875 ATCTATGATCCCTCAGATGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 2 10 10 81 2L 3503185 3503261 ATGAAGATGAGGACGAAGTG 57 3503123 3503144 GGTTGTTGTGTTAAGTTTAGGG 57 NA Drosophila melanogaster 61 Cog3 FBgn0031536 FBtr0077573 3 1 1 88 2L 3456231 3456309 AGGAGAATCCCAAATTCAAGGA 59 3456164 3456182 ATAGTTACGCACCAGACCC 59 NA Drosophila melanogaster 61 CG42296 FBgn0259192 FBtr0299676 1 1 1 60 2L 2033198 2033216 GTCCTGTCCTACTCCTGTC 58 2033156 2033174 CATCGCAAATCCTGGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31935 FBgn0051935 FBtr0077916 2 1 1 80 2L 1595640 1595661 AATGCACGAGATCTACAATCTG 58 1595527 1595600 GCATTGCTTAGAATGTCAGC 57 NA Drosophila melanogaster 61 CG14340 FBgn0031302 FBtr0077955 1 1 1 86 2L 1113077 1113095 GAACTCGACCATAATCGCC 58 1113145 1113214 TCGGTAATGAGCTTCTGGG 59 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 2 1 2 211 2L 1038315 1038333 GAACTGGTACAGATGCAGG 57 1038506 1038598 GTGAAGTCCGAAAGGATTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 1 2 2 80 2L 1014602 1014621 CCAGTTTCACTTCCTCTCCT 59 1014476 1014562 TTCACTTTCCTTCTGAAGTCCA 59 NA Drosophila melanogaster 61 ds FBgn0000497 FBtr0078045 3 1 1 83 2L 644493 644511 TAAGAGTGCAGATCGTCGA 58 644306 644448 GTTCAGTAGCTTCACTGACTG 58 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 1 2 2 81 2L 592323 592341 ACACTACCCAGATGTGGTG 59 584434 592279 CTTGAACCACACCTCAACTC 58 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 1 2 2 115 2L 450530 450673 TAGAGGATGGCCTTACCCT 59 450433 450451 TATGTCCTCGGGATTCGTC 58 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0113009 1 1 3 80 2L 284960 290825 CTACTGGTCGCTGATAATTCAG 58 284901 284919 GGTGTCAGCTCATTAGTGC 58 NA Drosophila melanogaster 61 CG17075 FBgn0031239 FBtr0078142 1 1 1 60 2L 264125 264143 ACAGTCAGCATAACAGCCA 59 264083 264103 CGATAGACATTCCCGAAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11377 FBgn0031217 FBtr0078104 1 1 1 98 2L 103427 103529 GTGTCATGATATTTCTGCGGAG 59 103588 103606 TGGAAGATGACACAGGTGG 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 3 3 10 97 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111112 112704 TCCAAACATGATACCCTGGTC 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 2 2 4 125 2L 128931 130516 TAATAATCTACTGGGCACAGC 57 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 2 2 2 82 2L 592324 592342 CACACTACCCAGATGTGGT 59 584434 592279 CTTGAACCACACCTCAACTC 58 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 3 3 3 87 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831774 831793 CAGTACATGTTCTGCTCCAC 58 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 2 4 4 80 2L 872014 872035 AATCGCCTCAAGATAAACTCAG 58 872075 872221 TAGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 2 3 3 80 2L 1180386 1180405 TCTATGAACGTGTTCAACGG 58 1180447 1180529 GCAGTAGGTGACGATAACTG 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 3 2 3 81 2L 1179514 1179866 GAGTTAACCCAGGGAGTCC 59 1179911 1179929 AAGTCCAGTCTGAGATGCG 59 NA Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 3 1 1 107 2L 1611793 1611811 AATGCATCAGATTCGGTGC 59 1612019 1612037 TCGGTTCAATTCCGATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089786 1 1 2 112 2L 1855374 1855392 AATGCAACGTGAATCCGTG 59 1855468 1855626 CACGAACTCATCTTCGCAC 59 NA Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 3 2 2 80 2L 2144042 2144127 CAAGCTATACTACAAGCAGCG 59 2143982 2144003 TTTAGCTCTGTGATAAGCTTGG 58 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641,FBtr0112639 2 2 3 91 2L 3368181 3369125 GGGTTCTCTGGATTAAAGATAGTG 58 3368113 3368131 ACAACTGCTCGAACTTTCG 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 1 9 10 123 2L 3502123 3502430 CTGCTTTCCAATGCGAAGG 59 3502018 3502038 CGTAGGTGAGAATAGTGTCGA 59 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 3 4 4 67 2L 4904926 4904944 CTGCCCTCCATCTTATCCA 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 2 2 2 80 2L 4935314 4935333 GCTTTGGATTTCTGACTGTG 57 4935176 4935274 GAAGTATATCCTGGAACACCTG 58 NA Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394 1 1 2 80 2L 4935903 4936124 AGAGAATCCATGGTTCCTCC 58 4935842 4935862 TGACGTTCTTCATATCCACCT 59 NA Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 3 1 1 80 2L 4977630 4977648 CCTTATGAGCGAGAAGTGC 58 4977754 4977772 CTCAGCAAAGCCTTGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0079033 3 1 6 65 2L 5043838 5043858 TGTGAAGCTTTAGTCAGTGAC 58 5042882 5043811 CGCCTGCTTTCATTAGTCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 2 6 6 62 2L 5041693 5041713 AAGCCTGGATATTAAGGTCCT 58 5041502 5041520 CTTCAAATCGATCAGCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 1 2 2 82 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892690 5892710 AGACTGAACGCTTATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 3 2 2 97 2L 6291178 6291255 TGGCAAAGGTTACGAATGG 58 6291313 6291334 CACTTAAATTCCGAACTGTCTC 57 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 3 3 3 83 2L 6325528 6325546 GAGGAGATTGACCTCTCCG 59 6325590 6325721 GGTAAGACTATCCATGCTCTCC 59 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262 3 1 2 89 2L 6495788 6495806 TACGAGAAGGAGCAGTCTG 58 6495859 6496065 CTACGGAGTCTCATCGTCG 59 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296 3 1 2 103 2L 6652424 6652444 CAGGTTGGCTCATTAGAAAGG 59 6652561 6653221 TGGGCCTCTTCATTCTGAC 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 1 5 5 131 2L 6924280 6924300 GGTTATCATGTACGACCAGGA 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079359 1 1 5 80 2L 6963548 6963647 ATTGTTAGAGAAACACTTGCCG 59 6963489 6963510 TCGTCGATCTCCAAACTATAGC 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079460 1 1 5 111 2L 7458113 7458131 CTTCACCTTCCTCATCCAG 57 7455750 7458041 GTTCTTCAACACCTTATTGACC 57 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605,FBtr0112603 3 2 4 147 2L 7501515 7536282 TTTCTCAGAACCACCATCG 57 7501386 7501404 GAGTGATTCATCGAGTGGC 58 NA Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 1 2 2 80 2L 8200025 8200113 TTTATGCTGGCCACTATAACC 58 8200153 8200173 GCTATTGAAGACAAACTGCTG 57 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 1 3 6 84 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 3 2 2 89 2L 8364197 8364215 AAGAAGGGTCTGACTCCCT 59 8364064 8364083 GATCTTGTTTCCGTTGACGA 58 NA DesignNoJunction Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700,FBtr0079699 2 2 3 110 2L 8493050 8493068 CGCTGGCTATAACGAACTG 58 8492794 8492978 CGTTTGGAATTCTCCAGATCG 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 3 3 4 182 2L 9519249 9519269 TCATACTGGGTCATCTTTGTG 57 9519472 9519730 AATCGGTGATTCTCTGCTG 57 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 1 2 2 80 2L 9643110 9643129 AAGAGCCTCGACTACAAGAC 59 9643170 9643261 CAATAGGTGATTTCTGCCCTG 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 2 3 9 81 2L 9905924 9905942 CAACGTACCTGGCAATCAG 58 9905070 9905881 ACTGTAGTTTAGCTTGGGAGG 59 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 3 3 3 82 2L 9957834 9957852 CGAGATTCTCAGGGAGCAG 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 2 1 1 72 2L 10050595 10050615 CCACACTTCAGGAATATAGGC 58 10050708 10050726 GGCTTAAACATGTGAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 4 7 80 2L 10257441 10257462 CACATGTAAACAATCCTCTCCA 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089737,FBtr0089736 2 2 4 159 2L 10264250 10264555 GAGGAAACACAAGTGACGC 59 10264808 10264826 CCAGGTACTGATACCGCAG 59 NA Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 3 2 2 153 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328595 10328615 TTGACCAATAGCTGGAGAGTC 59 NA Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 3 1 1 119 2L 10653245 10653263 CATACGCCAGGAATCACTC 58 10653495 10653514 CACAATGCACAGTAGTTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 1 2 2 80 2L 10999568 10999588 CAGGCCATAATGATCATTCCC 59 10999441 10999527 CCTCAACGTCCTAAAGTCAG 58 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 3 2 2 80 2L 11007424 11007508 TATTTCCTCGACTACTCGAGTG 59 11007549 11007567 GTGTTGCCCATCATGATGG 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 5 6 103 2L 11835160 11835179 CTCGAATATGTCGTTCACCG 58 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 2 2 2 60 2L 12056425 12056509 TCAGACAAATATGCGGTGC 58 12056533 12056551 GATGCTTTAGCACCGACAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080301 1 1 2 141 2L 12063015 12063088 CGGACATGATGACAACTGG 58 12062892 12062910 AAGAACGTAGGTGTTGCCA 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 3 4 4 123 2L 12385729 12389196 GGAGCTATAAAGGCCCTCC 59 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 1 1 8 83 2L 12477157 12516493 TTATCAGCAGTGCATCTGGA 59 12458202 12458220 TGAGATGCGACTTGACCAG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 3 3 17 90 2L 12731059 12737970 TCTTTATGGTTCTGGCTACC 57 12738023 12738041 AAGTAGTACAGGAAGGCGA 57 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0289981 1 1 3 80 2L 13170775 13171322 CTACATTGCGAACTCCTCTG 58 13170714 13170732 TCCAAGTGAGGTTCACTCG 59 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0289981 2 1 3 80 2L 13170777 13171323 GCTACATTGCGAACTCCTC 58 13170715 13170733 CCAAGTGAGGTTCACTCGA 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 2 4 5 160 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737812 15737831 TCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 2 4 5 81 2L 15760338 15760416 CGATCCGGATTACAGAACCT 59 15760276 15760295 TGGATAGTTGGCTCCATAGC 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090004 1 1 4 89 2L 16181895 16182782 GAGTACAACTCTTTAAGGGCA 57 16182893 16182912 CATAGACCAGATAGGTTCCG 57 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 3 3 4 81 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 2 4 4 89 2L 16696753 16697510 CTATGTTTAGGTGCAAGGGC 59 16697562 16697580 ATGCCTTCTGTAGCACCTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 2 14 16 82 2L 16774784 16774802 AGACTCTGGATACCCAGCA 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 3 1 1 60 2L 17532020 17532040 AACTTCTTTACAGGATCAGCG 58 17531915 17531933 AGTTCTTCGGACAACAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 1 2 4 173 2L 18475267 18475342 AGATGAGGTACCATTGCTGG 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 3 2 3 96 2L 18965178 18965271 TGATGAATGCGAGATTGCA 57 18965100 18965120 TGACAATAGTGCAATCGAGAG 58 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 3 3 3 296 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117847 19117866 CAATCCATCATGACCACCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081213,FBtr0081212,FBtr0081210 2 3 6 176 2L 19410626 19416414 GATGCTCTATTAGCCGACC 57 19410402 19410486 GTGCTCTTGATACACCTGG 57 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 1 6 9 92 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882384 20882402 GTATGTTCTTCACGTCGCG 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 3 7 7 80 2L 21118119 21119756 AACATAGCTACCATCGGTGG 59 21119799 21119817 CATTAGACCCGGAGTCTCG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 2 2 2 89 2L 21634962 21634980 AGAAACGAGCCTTTCTCGA 59 21635033 21635107 ACAATAGCAGACGCTCCTG 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 2 5 5 83 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666302 21666320 CGAAGCATTTCGTTGGAGG 59 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 2 3 3 91 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759240 AAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 3 3 3 110 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473856 22476863 GCTTTACAATCTCGTTTCGC 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 3 4 6 105 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737576 22741716 CGAAAGCCAGTTGACTCTC 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 1 2 5 112 2R 1492008 1492095 AAGTTTGAGTACGCATTCTGTC 59 1491861 1491879 TAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 3 4 4 90 2R 1595875 1596127 CCGCTAACATAGATCTCAACAC 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086058 2 2 4 101 2R 1604281 1604794 AGATACAGGATCGCTTCTACC 58 1604200 1604218 ATGAGGATTCCCGTTCCAG 59 NA Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 3 2 2 135 2R 1907047 1907121 TGCCAAAGAAGGAGAACAC 58 1907220 1907238 GGTATCCTCCAGTCTAGCC 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 2 2 6 168 2R 1982571 2010403 GAATTCTATATCTTCAGGTCGCG 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301423 3 1 7 108 2R 2611523 2612086 CAAGCAAGAGGATGATGCG 59 2611433 2611454 GGTCTTAACGAATGTTATGCCA 59 NA Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 2 2 2 161 2R 3012687 3012927 CTGCGATGAGATCATCTTCTC 58 3013050 3013068 AACATTGTGTCGAAGCAGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111086 1 2 59 80 2R 3247508 3249237 GATTGGTCATCACAGAACCG 59 3247447 3247467 GAGTGAGAGTTATGTGCTCCT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111078 1 1 59 80 2R 3246158 3246176 GAGATTTCCCAGGGAATCG 57 3236468 3246115 GAACTTGTACCATCTGTGGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111058 2 1 59 81 2R 3219879 3230480 TGCTCGTCAATGTACCTCC 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476 3 1 8 128 2R 3357326 3357347 CTGCTACATTGACAAATCTGTG 58 3357008 3357238 ATCGTAGTTACCTCCTTGGA 57 NA Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 2 3 3 80 2R 3490153 3490636 GGATAAAGTGGGTCTTCGC 58 3490091 3490109 ACCGAGAAGACCTTGATCC 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 3 2 6 144 2R 3517706 3517724 TACATCTGCCTCATGGAGC 59 3517830 3521737 TCTTATTGGCTAGTTTGCCCA 59 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0113050 1 1 2 84 2R 3678068 3678087 CCTACGCATTTGGAGTTCAC 59 3678134 3678208 TTGTGCCTCTCCTTGATGG 59 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 3 4 4 85 2R 3806268 3806288 GCGGCTTTAATTCAAAGAACG 59 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 3 4 9 149 2R 4562375 4563993 CAAATGGACAGCTTCTGGG 58 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 2 2 3 92 2R 4619313 4619682 CTGCTATTCAATATGCAGTCCG 59 4619242 4619260 CTCACGGAGAACTTCCTCG 59 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 1 3 3 91 2R 4799446 4799529 AGAAGAATGCTCCTGTTATCCT 59 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273384 2 1 2 138 2R 4858553 4858944 ACGGTCGGAAGATTCAGTG 59 4858433 4858452 TTCTTGGTGAATAGGCCCAG 59 NA Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 2 2 2 81 2R 5002675 5002751 GGACGAATTACTTGTTCGAGTC 59 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 2 2 4 89 2R 5013708 5014932 AAGGACAAGACTAATCCGGC 59 5013524 5013544 CTTGAATCCCTTATAGGCGGT 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089933 1 1 5 99 2R 5066720 5073629 AGATCCAAAGCCATCATGAC 58 5066640 5066658 TAATGAAGGACGTCTTGCC 57 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 1 3 10 80 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 3 3 10 83 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 2 2 2 80 2R 5291860 5291878 GTTCCACGATTCTACGGTC 58 5291417 5291816 TCCACGATGAATATCACGC 57 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892 3 1 2 84 2R 5320720 5321863 ACTGGTCCAATCAGAGCTC 59 5321910 5321929 CATGCGTCCTGAAGAAAGTC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 3 4 5 177 2R 5424067 5424085 GAAGCTCATGGATACGCAG 58 5424433 5424527 CTTTAAGGCTTGTTGCAAATCC 59 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122,FBtr0112672,FBtr0112673 2 3 4 80 2R 5463886 5465706 GCGAGCAAATAAATCAGTTCG 58 5463826 5463844 TGATCACGGAGAACAGGTG 59 NA Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 3 1 2 78 2R 5476729 5476747 AAATACTTCGCCCAAACCA 57 5476842 5476860 CGTCTTATTCGCCTTCACG 59 NA DesignNoJunction Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 1 2 2 127 2R 5703110 5703128 TATTTGCGCAGGATCAACG 59 5703269 5703289 TCGAAGTCCCTTTGGTTACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 2 2 2 80 2R 5786776 5786864 ACATGAAGGTGATGTGGGT 59 5786714 5786736 AACACCTATAGAGCATGTAGAGG 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088447 2 2 5 102 2R 5805514 5805532 ATCTTAGCGTACTGAGCCA 58 5805024 5805448 TACTTATCGTGCCCTGGAG 58 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 2 2 2 105 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860096 ACTATCTCTGACGATCTGCT 57 NA DesignRelaxed Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 2 4 4 101 2R 5880408 5880493 CGGACAGAACTTCAGATTCC 58 5880557 5880575 TAAAGATCATCGTCGCCGT 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 3 4 4 102 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880559 5880577 TGTAAAGATCATCGTCGCC 57 NA Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088411,FBtr0088410 3 2 2 203 2R 5984619 5984637 TTGCAAGCAAAGTTCCCAC 59 5984908 5984926 GTGGATGTGTTCAGGTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 1 2 10 81 2R 5994287 5994975 TCACTTAGCTAAACAGGCGT 59 5995018 5995037 GAGTGTCGAGTCCTTGTAGG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993943 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993943 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 3 1 1 70 2R 6199181 6199200 AAAGATTCCATACGAGACGG 57 6199079 6199097 TGTTGAAACTGCACTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 3 2 3 83 2R 6343083 6343102 GTCCTTATTCGGAAGTACCG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089354 1 1 26 95 2R 6377744 6377762 ATCAAGGGATCCCTCAAGC 59 6377303 6377687 CAAGACACATTTGCACTTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 2 5 12 89 2R 6449615 6449634 GACATTATCTTCACCGACCT 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 2 4 4 108 2R 6730658 6730676 AACGTCATCGTCTTTCCCA 59 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 2 3 3 132 2R 7108117 7108443 GACACTATCAGCATCGTTGAG 59 7108535 7108555 GGTTCAGGCTCATCTTATCCT 59 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569 1 1 3 108 2R 7115695 7115713 CAAGAGCCGGTTTGATTCC 59 7115329 7115623 TCAAAGTCGTCGTTCTGCT 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 2 4 5 80 2R 7199287 7199308 CCTAATCACAGCCATTATCCTG 58 7199176 7199247 CAGTAGCGTCTGTATCCCAG 59 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026 2 1 3 82 2R 7914457 7914475 TGCTGCTTATTGCTGATCC 58 7914335 7914411 CTATGATGTGAGGCTGGCT 59 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025 1 2 3 81 2R 7914657 7914741 CGCGTCGTCAATAGAAACAG 59 7914595 7914619 CTATAAACTCGTTGAAGAAGACCAG 59 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 1 2 2 88 2R 8087083 8087346 GTGTTCAGAGATGTTGAGCA 58 8087014 8087032 ACTTTCAGGACGTTGAAGC 58 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 1 4 4 101 2R 8229049 8229067 AGTGTTCCACCGATCACAG 59 8228908 8228926 TGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 3 2 2 92 2R 8321900 8321984 TTCACAAGATCTTGCCAAGG 58 8321827 8321845 ATTTCTTGGTTTCCAGGCC 58 NA Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087844 3 1 2 80 2R 8541554 8541626 TACCAGCAGATCTATGACTCC 58 8541668 8541686 TCGAGATCCCATTTCCCTG 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 3 2 2 99 2R 8574557 8574576 AACGGAAATAATGTCGAGGA 57 8575155 8575173 CTGAGGTATCTGCCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 2 2 2 80 2R 8588060 8588139 GATGTATGAACTAAGTCTACTCCC 58 8588178 8588196 CTCAGCTCGTAGATCTCCT 57 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 3 3 3 90 2R 9057262 9057280 TTGTTCATCGACGAAAGCA 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 2 3 12 92 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305323 9306499 AACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 2 3 15 80 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769988 9770009 GTAACCCATTTCAACAGATCGT 59 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 3 3 3 159 2R 10116657 10116675 TCTTCGGTATCTGCATTGC 58 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 1 4 7 84 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 3 2 2 80 2R 10495454 10495472 AGCTCTAGGAAACGCTCAG 59 10495328 10495413 AGATTAACGAACTGACTAGCGT 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087501 2 1 2 101 2R 10499356 10499374 AAGTGTCACGGATGATCCC 59 10499184 10499291 CGTTTGGCAGCTTCATCTG 59 NA Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 3 1 1 115 2R 11182520 11182538 GGTTCCTGTTCTGGTTCAC 58 11180980 11180998 CTGGACATGGTTCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 2 4 7 162 2R 11669313 11669332 CTATTGCGGAAACACTCTCG 59 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 3 2 13 102 2R 11856643 11856663 CGAAACTAGCTGTCTTGTGAC 59 11854016 11856583 GTCACGTAGATGGTAGTACTCTC 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175 3 1 5 103 2R 12214656 12217750 ATCTCAAGGCCGAACTACC 59 12214571 12214589 CTTGGAGATAATGTCGGCG 58 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 2 3 5 80 2R 12247595 12247615 TCGATATGTTCACCAATTGCC 59 12247654 12247763 GATCATTGAAGTGCTTCTCGAC 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 1 2 5 103 2R 12249021 12249226 TCGAGAAGTACTACTGCGA 57 12249293 12249311 GAGGAACTCGATGATCACG 57 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087088 1 1 4 80 2R 12391127 12412887 ACTTTCACCAGATCATGTGC 58 12412925 12412948 GTATCTCGATCTTCGTTCATATGG 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 2 3 4 80 2R 12415122 12415141 GATGTGATCAACTTGGAGCC 59 12415183 12416061 CTTGCAGTCGAAGATCTGAC 58 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 1 3 3 80 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541078 12541164 AAGCCCGAATAGAACTTATCG 58 NA Drosophila melanogaster 61 cnk FBgn0021818 FBtr0086962 2 1 1 74 2R 13306950 13306968 CTACATCAACATCGCCGAG 58 13306731 13306752 CCCTTCATAGACTCATCCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 1 2 2 80 2R 13403020 13403095 GCGGTTTCTATCCTAAACACC 59 13403135 13403155 TATGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 2 1 1 136 2R 13405487 13405505 CTGTTTGGAGCCTCTCCTC 59 13405310 13405328 GATGTTCGTACGCTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 3 3 8 82 2R 13408429 13410372 TAATGAATCTGTGCGGTCCT 59 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 3 2 8 98 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312532 14313480 GGAACTCAACGCTTTAACGT 59 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0113361 2 1 3 153 2R 14320265 14324105 GAAGCCTACAAGTTCCAGGA 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 3 5 5 96 2R 14843623 14843771 CATCGTGAGACTCGTTCAC 58 14843831 14843849 TATCCTGTCGATCTCCACG 58 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0100137 2 1 3 82 2R 14947145 14947245 GGGTGTAAGTATACGTGTCC 57 14947290 14947308 CAGTATCGCCTTGAGAACG 58 NA InUTR Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 1 5 12 80 2R 15062801 15063698 AGCAATTCACTTGGACCAC 58 15063739 15063760 CGAGGATTCTGAAATTGAGGAG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 1 4 19 83 2R 15370534 15370552 TGCCCGATCAGATAATGCA 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 1 6 6 123 2R 15418200 15419687 ATTGAGGGTAAAGGCACCA 59 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 2 1 1 90 2R 16768359 16768377 CATTGAGAAGATGCCCGAG 58 16768554 16768573 AAAGGATAAATTGCCCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273396 2 1 2 80 2R 16876690 16876709 TACTCCATTCTCGATCTGGA 57 16876567 16876650 CGAATATACTTTGTGAACACCG 57 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302707,FBtr0302701,FBtr0302706,FBtr0302705 3 4 8 151 2R 17196043 17197141 GAGTCCCACAGAACTCGAC 59 17197253 17197274 GTTGAATCGATACTCGCTTGTC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 3 6 6 84 2R 17299915 17367607 GCTCAAGATCAGAAATCGGTG 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 2 2 2 81 2R 17372489 17372573 GGTCAAGATTGTTAACATGAGC 58 17372614 17372633 GCTGCCCATATGATGTAGTC 58 NA Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071691 2 1 2 138 2R 17494083 17494102 TATCCCAATGACCGACAGTG 59 17493857 17493982 TTGATCGGAGTTCGTAGCA 58 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299553 1 1 5 159 2R 17949076 17955939 AAACTAGCAAGGCAACTGG 58 17956062 17956080 CTAGACGCTTGGACTTCCT 58 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071816 1 1 4 150 2R 18210518 18212686 ATGACATTTCTGGTTTGCCC 59 18212795 18212817 GTCAGATCGTCATGAATGAAGTG 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 1 4 4 172 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA InUTR Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 1 4 4 119 2R 18693536 18693554 AAATTGACGGTTCCTTCCA 57 18693371 18693454 ATCCTTGGAGTCTTTCTGTG 57 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 1 3 13 83 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817833 18819046 GGATTTGTCCTCATTGCGT 58 NA Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 1 1 1 130 2R 18964704 18964722 TGTGGGAATATCCCTGTCG 58 18964537 18964555 CACTCCGTTGCAGATTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072025 1 1 2 90 2R 19300648 19302029 CAACCAAGATGCAAGGAGC 59 19300576 19300594 CAGGAAGCGATTGTTCACG 59 NA Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 3 2 2 93 2R 19437536 19437554 GAGCGACATCAGAAGAAGC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 1 2 2 127 2R 19767766 19767784 GTCAGCATGTGATACCCAC 58 19767875 19767969 AGAAGATTCCCAGGCTCTG 58 NA InUTR Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165 3 1 2 186 2R 19958351 19958370 CTTTCTCTAGCGAGCTTGTC 58 19958517 19960237 GTTGGCCAATCAAAGAGTAGG 59 NA Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 3 2 2 89 2R 20151258 20151334 CACGATCTGAACCATCCCA 59 20151385 20151405 GTAGTAGATACGATAGCCGGG 59 NA Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 3 1 1 62 2R 17520970 17520988 CAGGTGCATCTTGTAGCTG 58 17520828 17520848 GAAGATGGTTCGGTTGATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 2 3 3 84 3L 201358 201448 GTATTGTCAGACCGTGCAC 59 201496 201514 CTTCATCACCTGTTTGGCC 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 1 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 2 2 2 95 3L 219779 219797 GTGATATTGCTCGTCTGGC 58 219635 219720 GTTAACGGCCACCTTTGTG 59 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 2 3 5 101 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235421 235440 ATATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072572 1 1 2 80 3L 335164 335257 CCGAGAAGGACAAATTCGG 58 335102 335121 AGTACGAGATAAGCTCCGTG 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910 1 1 6 80 3L 982229 982247 CTGCATCTCTATGGTCTGG 57 982289 983845 ACCAAAGAACTCCTTGATCAG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 2 2 2 77 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562935 1562957 ACCTGGATCTCCATTAGTTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072772 2 1 2 83 3L 1748356 1748433 CCATCAGTGCTATTTCGTGTC 59 1748478 1748496 AACTAGCGGATGAGGAAGC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 2 1 3 99 3L 1803477 1803495 AAGATCGGCTTCAACATCC 57 1803555 1805018 CATCGTAGACTTGACTGATCTC 58 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 2 2 4 108 3L 1881208 1881228 CTATTTGCTCATCTTCACGGC 59 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 3 4 4 281 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253423 2253441 TGGCGATCCTGTAGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 3 6 15 80 3L 3083796 3085208 TCGCCACTTATATGGTCAC 57 3085252 3085270 ATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 3 1 1 120 3L 3159444 3159463 TTAATCAGGAATCTGGGTGC 57 3159283 3159301 CCTTCTTAGGCTCCACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 2 2 2 101 3L 3185485 3185503 CGATTCGATATTTGGCGGC 59 3185567 3185642 ATGGAACTCCGTCATAGCAG 59 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778 2 1 2 102 3L 3507200 3507308 CGATTAAGGCGGAGAATCC 58 3507374 3507392 ATGGACTCCAGATTGTCCA 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 1 4 13 80 3L 3516816 3552793 AATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073187 1 3 5 95 3L 3769396 3780430 GCAGTGCGCTAAGAAACAG 59 3769319 3769339 CTGAGTTTGCTCTTCCTTTCC 59 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 1 2 2 172 3L 3908525 3909015 AACTACGATGATGAGCCCG 59 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 3 2 6 86 3L 4129784 4130401 TCGTATCGTAAGGAAGATAGC 57 4129718 4129736 TATTGTCGGCATAAGGTCC 57 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 2 3 3 92 3L 4247578 4247662 GCGGATTAGAGCAAACGAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 2 2 2 61 3L 4405802 4405823 GATGTGGTCGAAATTAAGACCG 59 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 3 5 5 94 3L 4505302 4505411 AAGTTTGAACAGGTTCGCA 58 4505226 4505245 CGGGTAGAGCTCTTTATGAG 57 NA Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 2 1 1 115 3L 4622735 4622753 GATGTGGATCGCATTCTGG 58 4623309 4623327 TTAGCCAGCAAACAATGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0300031 2 1 2 81 3L 5500545 5500563 GAAGTGTGCCGAGAATCTG 58 5499378 5500501 CGTTGACATTACTATGGGCG 59 NA Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 3 2 2 80 3L 5773226 5773496 ATAGAAAGCACGAGTAAGGTG 57 5773538 5773556 CTCGAATCTTTCATGGGCA 57 NA Nonspecific Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 3 1 1 87 3L 6957518 6957536 GATTGCCCAGTGGAATTCG 59 6955002 6955020 GAAGAGGTTCACATTGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0302845,FBtr0302842,FBtr0112702,FBtr0112698 2 4 15 138 3L 7701002 7701020 ATCCTTCATGTCCGACTCC 58 7699830 7700734 CATATTGTCTTCGCTGGAGAC 59 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0076785 2 2 3 199 3L 7761741 7761819 AATCATAATGAGGCCACCGA 59 7760182 7761579 AAATCTTGCGGCAGATAGC 58 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 2 1 1 61 3L 7888447 7888468 GAAGATTGGATGCGATTACTCC 59 7888547 7888565 CTTCATCCTCCCACATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076771 2 2 5 147 3L 7900432 7904534 CAATCGAAGTGCGAGATGTC 59 7900304 7900322 CTCCGAGAATGTCCAGACC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 3 5 13 84 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627739 8627757 CAAGTAGGACTCTGTCGTG 57 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 2 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727349 TGGACAAGTTCTTGACTTCG 58 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527 2 3 5 109 3L 9069795 9069813 TGGACAGCTTTACAGCCTC 59 9069883 9069966 TAAACTCAGTGGAAAGTTCAGC 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 2 2 4 99 3L 9346894 9346915 GACTGGAACAAGATTCAGAAGC 59 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 3 2 2 82 3L 9366349 9366367 TCATATTCACCTGCCGGTC 59 9366411 9366499 GATCACCACATTGCTGTATCC 59 NA Nonspecific Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 1 2 3 139 3L 9721699 9721819 CACCCTGGACTTTATTAGATCAC 58 9721918 9721936 AAAGTTGAAGCGAGTGAGC 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 7 8 100 3L 9817650 9817671 GAAGTCGACGATCAAATAACGA 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 1 3 8 183 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824111 ATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 1 2 2 296 3L 9851661 9851680 CTCATCTTACGCTACATGGT 57 9851110 9851128 GTCACAATGCCAACTCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362,FBtr0076363,FBtr0076365,FBtr0076364 3 4 4 80 3L 9854152 9854171 AGGACATTGATGTCTTCCGG 59 9854029 9854110 GCAGATTGCCAATGGTAGAG 59 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 3 2 2 80 3L 9886557 9886630 ACATGCGATACAAGAAATGGC 59 9886497 9886516 CCAGATTGTTATCGGATGCC 58 NA Nonspecific Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076301 2 1 3 127 3L 10218060 10218078 GATTCCAGCCAAATGCTCC 59 10217329 10217971 CATAAACCCGTAATTCGTGGG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 1 4 5 92 3L 10568435 10568453 CATTCGCTAACAGCAACGA 59 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 2 2 2 74 3L 10639969 10639987 CGTGCTGAAGTTCGATGAG 59 10634845 10634863 ACGATGCGTCTGTAGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 3 2 2 139 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087227 11087301 GCAAAGTGTTCAACCTCCTC 59 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 3 3 3 89 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152460 11152478 TGTGGTAGACCATCCAGTG 58 NA Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 2 3 3 228 3L 11166959 11166977 GAAGTATCTGCTCTTCGCC 58 11167239 11167654 AACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 1 4 4 80 3L 11520328 11520347 CTGATCTCAAAGCCCTAGTG 57 11518762 11520285 CAAATAGAGCGAGGGTGTG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 2 3 6 104 3L 11811260 11811278 GACATTCTACTGCGTGCAG 59 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 2 2 4 94 3L 11872544 11872616 CCGATCCATTGCTCATGTG 59 11872671 11872692 AGCACAAGCCATATCTAATTCC 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 3 2 4 115 3L 11872449 11872469 TGTTCAAAGTCCAAAGCTGAC 59 11872545 11872618 AACACATGAGCAATGGATCG 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 1 3 3 80 3L 12468728 12468749 AGAGTGATGAAGAGCTATACAC 57 12468611 12468689 CTTGGGTAACCTTAACAATGC 57 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 2 4 4 80 3L 12805256 12805274 ACAAGGAGAACGCAAATCC 58 12805315 12805395 GTGTGGGCTTATACGTATTGAG 59 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 3 4 4 80 3L 12801569 12803316 TAAGATGGGCATTCGTCCA 58 12803360 12803378 CCGATGGGATTAAGCTGTG 58 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 2 3 3 119 3L 12842192 12842273 GCAACTCTTAATGCGGATGG 59 12842092 12842110 TGGTCGCTCCCTTATTGTG 59 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 1 2 2 80 3L 13432678 13432760 CTAAGTCGGACTGTCAGATCC 59 13432618 13432638 TTCCTACAGTAGTAACGGGTG 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 2 3 4 174 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041 3 1 6 97 3L 14223199 14223287 AAGATTGTCTGGAACTGCTG 58 14223347 14223365 TGCATATTCGGTCTTGGTG 57 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 2 7 7 80 3L 14407795 14407883 AGGCTAAGGAAATTACGATCC 57 14407735 14407755 TTCGATCACCCTTCTTTAGAC 57 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 3 3 3 80 3L 14620526 14620544 GCTATGTGACCTTTGGAGC 58 14620588 14620666 GCCATGGAGTCAAATCACC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0100443 2 1 9 73 3L 14747518 14750018 CTGGACTTGCTAAAGGCTG 58 14747463 14747481 TAGTCGTCCTTGGTAACCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bmm FBgn0036449 FBtr0300190 1 1 2 89 3L 14770500 14770518 AGGCTCTGTCGAAGATCAC 59 14770076 14770449 ATGAAGAAGTCTGATTCGACG 58 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 2 2 2 86 3L 14858469 14858826 CATCCTGACAGTTAAGGAGCT 59 14858874 14858892 AACACATCACTCGACTCCG 59 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 3 2 3 81 3L 15580157 15580176 AATGAGCCGAACACATTCTC 58 15579691 15580113 TGTCCTTACCCTGTGAGTC 58 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543 1 1 3 99 3L 15806416 15806436 TTATTCTGTGCTTTGGACTGG 58 15805333 15806358 ATATGCTTGTTCTTGCCTAACG 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 3 4 4 67 3L 16346790 16346808 GCATCATCAACTTCACCCG 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 2 1 1 75 3L 16464696 16464717 CAGGCTACAGATATCTGTTTGC 59 16464574 16464592 AACAATTTGCACGGTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0100145 3 1 2 172 3L 16674040 16674348 AATTTACACAGGTGGCCGA 59 16673007 16673027 TTGCTCTGAGAAGTATTCCGA 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 3 3 12 162 3L 16895016 16895038 GAGGAAATCGAACTAGAAAGACC 59 16895159 16895238 CTTCTTTGTCCAACTGCTCC 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302786 3 1 12 88 3L 16895282 16895488 CAAATCCAATCTGCAAACCTC 58 16895537 16895556 TTTCATCCATACGTGGACTG 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 1 7 12 80 3L 16905366 16905384 CTACGAGAATGTGTTCGCC 58 16905425 16906340 TCTTTGTAGGACAGATCCTTGG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302781,FBtr0302779,FBtr0302782 3 4 12 131 3L 16890158 16890176 AGATCTCTTACCAGCTGCC 58 16890269 16890492 TGATGTAGGCTATGTCCAGTG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 2 3 10 85 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922045 16922128 CAATCGAAAGACCCACTGG 58 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 2 3 5 83 3L 16983964 16984118 GTGAGCACATTCGTAGATGAC 59 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 1 3 5 81 3L 16983966 16984120 GAGCACATTCGTAGATGACTC 58 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 3 2 5 81 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978437 16984131 AGTAGTGGTCTGAGTCATCCT 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 1 2 4 80 3L 17061138 17061156 GATCTAACCAATGGGCAGC 58 17060462 17061099 CTGATAGTTGTTCATCACTGACAG 59 NA Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 2 2 2 185 3L 17670666 17676048 GAGTTTCAGAGTGTGCCAG 58 17676195 17676215 TTTGTTGACCTCATAGCACTG 58 NA Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 2 2 2 80 3L 19290533 19290623 CCACCATGAATTTGATCACGA 59 19290665 19290683 ACTAGCTCCTGATTGAGGG 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 2 3 6 82 3L 19685470 19686094 CGAGGTGTACAGATGTACCA 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 3 3 5 158 3L 20505476 20505629 CAAGGGAAAGCTACCAGTG 58 20505751 20505769 TTGTTGTCATGGTCGAAGC 58 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 1 2 3 128 3L 20998177 20998195 ATAAACCGCCACAGGACTC 59 20995287 20998085 TTCCCAGATGTTTGGTGCA 59 NA Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 1 2 2 81 3L 21439404 21439425 GCCTAAGCGAAATAGATTTCCA 59 21439467 21439552 ATCGTGGACACATTCTGCT 59 NA Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0112842 1 1 2 80 3L 22300694 22300712 CGTCTTCCTCCCAATCCTC 59 22298850 22300650 GCTGACTCACCTTACCTCC 59 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 1 5 5 126 3R 66130 66148 CAAGAGGACTTGGACTCGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113337 1 1 21 186 3R 117787 120852 TTTCATTGGCGCTGTAGGA 59 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 3 4 4 176 3R 206341 206431 ATACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 3 5 5 141 3R 452789 452807 TTTGGGACGCTATATGGGA 58 452912 452991 ATTGACCAGACCAAGAACG 57 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 2 4 4 80 3R 534707 534725 TCGAGGATAAGATCCGGGA 59 534768 534897 GTTTCAGTTCCTCTTGCGAG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 10 10 80 3R 562838 562911 AAATGAAGTAACGAGGTCCGA 59 562778 562796 ATACGCTTGATCAGAGCCT 58 NA Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 3 2 2 86 3R 640425 640445 ACAGGAGTTGTATGCAATGGA 59 640493 641024 AGATACAGACACATGCCGG 59 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 2 2 2 85 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748535 748677 AACAAATACCTGGTGTACTCC 57 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0110958 1 1 2 80 3R 768439 768458 GTTCGTCTTCAAGCTTTCCT 58 768501 770705 TCCAGCCATCTGTTGTAGG 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735 1 1 2 115 3R 2190439 2190735 GAAAGAGCAGCCACTAGCT 59 2190342 2190361 GGAATAGACCGTCGAGAGTG 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 2 4 4 87 3R 2211842 2211860 AACAAGTACGACACCTGTG 57 2211911 2212066 TGTGATAGGGATGTGAGCA 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 2 4 11 87 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 1 2 4 80 3R 3848353 3848373 GCAAGAAACTAATCATCGCAC 58 3847658 3848184 CTATTGGGTTGCAGATGCTC 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 2 3 3 80 3R 4068883 4068961 CGTCAACTTATCGCTAAACTCC 59 4068824 4068842 GAAGTTGACGAGTTGCGAG 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 1 2 3 81 3R 4068010 4068133 CAAGAAGCAGATTCAACCTAGC 59 4067950 4067968 CACACTGTGCTCGATTTCG 59 NA Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 1 2 2 60 3R 4576503 4576523 GGAGTGATGTATTTACTGGCG 59 4576397 4576417 TGAAGTGAATGATCATGAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026 1 1 2 80 3R 5191352 5191372 CATATCCTTCCATGACGTCAC 58 5191413 5191488 GATGTGGATTTCGGACAAGG 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 3 2 14 97 3R 5260132 5269739 AAGCTTTGTTCGAGTGAGTC 58 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 2 5 14 96 3R 5258550 5269739 ATTTCAGTTCCGGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 1 1 1 60 3R 5640069 5640090 TTCCAGATCCTTTACAATGGTC 58 5640176 5640194 TCAGGACAAACAGGAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082207,FBtr0082211,FBtr0082212,FBtr0082210 1 6 9 80 3R 5842064 5842083 AATTCGGATGAGAAGAACGC 58 5841640 5842026 CTTGGAACTAGATTTGGGTATGAC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 3 3 8 106 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359638 6359656 CTACCGAGGAAGACTGAGG 58 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 1 2 2 80 3R 6565218 6566919 GACCAAGCACTATTACAATGGA 58 6565159 6565179 GCCATAGAAGTGGGATATCGT 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 3 7 7 99 3R 6692602 6692621 GTTACGGTGAACAAGGAGGA 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 3 3 3 75 3R 7504709 7504729 CATATCTGGTGGTAGCAAGTC 58 7504583 7504672 TTTGGTAAGCATGGGAGTG 57 NA DesignRelaxed Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 1 3 15 188 3R 7815238 7818474 TTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 3 3 15 189 3R 7815238 7818475 ATTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 3 2 2 129 3R 8229471 8229491 TCCCAAGTACTTTGAGAACCC 59 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 1 2 2 80 3R 8901963 8901986 GAAGACCCTGTATCAGTATATCCA 59 8902025 8902131 TGTCCTTTGTACAGCAGGA 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 2 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257204 GGATGGATCTTTGACAATGGA 58 NA Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 2 2 2 94 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571991 10572010 TATCCAAATTGGGACCTCCA 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 3 3 3 80 3R 11013460 11013551 TTGATACCTGTGAGATGTTCGA 59 11013592 11013610 TAATGCGGCTGCAAATCTC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 3 5 6 124 3R 11024865 11024946 TACAGAGCAACTTGGACGT 59 11025032 11025052 GGTAAACGCATCGATAAAGGT 58 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 3 3 3 92 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191418 11191500 CCAGATTAATTTGCTCGTTGC 58 NA Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 1 2 2 80 3R 11270380 11270398 GCAGTAGAAAGCCCAAGGA 59 11270260 11270336 CACATTGCACCGAACAGTC 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 4 5 195 3R 11723421 11723505 GAGCTAAGTGGAAATGCTCG 59 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 1 5 8 101 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301479 1 1 2 96 3R 11885017 11885039 CATTTCACAAGTACATCGAGGAG 59 11885095 11885198 TAAGAACGAGTAGCTGCCG 59 NA Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 2 2 2 60 3R 12398522 12398542 CAGAACTTTACAACGCTACAC 57 12398563 12398582 CCAGAAACTCCAAGGTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083350 3 1 6 109 3R 12536328 12558459 ATGGCTATCGCAGGTAAGAG 59 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347 2 1 6 88 3R 12558426 12558444 GAGTGTCCTGAAGATCCGA 58 12536322 12550986 GAGTATCTCTTACCCATGTCTG 57 NA Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 2 1 1 98 3R 13559441 13559460 ATGAATGGCAAGCTGTTTCC 59 13559603 13559621 CTCCAGTTCGTGGTAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368 2 1 2 138 3R 14555950 14556056 CGCGAAAGAAGGATCATCTC 58 14556157 14556175 CCGGTGACCTCTATACTGG 58 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 2 4 4 87 3R 14810830 14834236 CACAGTTCCTGAAAGCGAC 59 14834287 14834305 TGTAAAGAGCTCCTGCTGG 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 1 2 3 93 3R 15464141 15464633 CCATGAAGGAGATTCCAGGA 58 15464067 15464085 TTGCGCAGAAAGAATTGGA 58 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 1 3 3 86 3R 15478732 15478750 GAGAATCGGAGGCCTATCC 59 15478581 15478682 TGGTGTAGCTCTTGTACGC 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 3 5 5 170 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396955 16396973 AATGCTCTCCTTCACGGTC 59 NA InUTR Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0083931 3 1 2 116 3R 16563654 16563672 CTACAGCCCTTACGATCCC 59 16563452 16563470 AGTCTTCTCATTACGGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084024 2 1 16 80 3R 17031763 17033350 CAAGATTAGCTTGCCTGTCG 59 17036513 17036532 AAGATCTGTGAGTCGTCCTC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084074 1 1 22 81 3R 17197785 17200795 CACAGAGGCTCAAGAGGAC 59 17197722 17197746 GTACATGTAGCCATTTAACACTAGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084078 1 1 22 80 3R 17200833 17200853 AACAGTCCCAGAACTACAGTG 59 17196356 17200793 AAATCAAACCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 1 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084334 1 1 3 86 3R 18515856 18515874 TTAAGCATCACATCGCCGA 59 18515731 18515810 TGGGCTCTACTATGGAATTATCG 59 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 1 4 4 80 3R 18614228 18614309 ATAGTTTCTATGCGGATCCCA 58 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 2 2 6 174 3R 19093390 19093551 TTACGTGTGAATTTGCTGTCTG 59 19093237 19093257 GCTCGTAGTTCCTGTTTAGGT 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0301491,FBtr0084385,FBtr0084384,FBtr0100227 3 4 6 121 3R 19094008 19094115 CTTTAGTCAGCGACAGCAG 58 19093905 19093924 CAAACTGGTGTAACCTTGCT 58 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089716 3 1 3 116 3R 19139473 19139491 ATCCTCAGACCTTCTTGCC 59 19139269 19139393 CGGTGGGAACTTCTTTGAG 58 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 3 3 3 80 3R 19574387 19574471 CCGACATTATCATCAAATGGC 57 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273215 2 1 2 80 3R 19674619 19674693 ATTCCAACAGGAGGTGGTC 59 19674733 19674755 CTCCTCGAAGGTATCAATTTCTG 59 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 3 3 3 87 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688920 19691287 GCAAGTAACCATTGTAGCCG 59 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 2 4 4 100 3R 19870978 19871167 AAATCAAGGTCAACTGGGC 58 19870896 19870914 CTCAATCTCGGGACTGAGG 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 3 2 3 145 3R 20864228 20864384 GGAAACACAGCTAAATCGGTC 59 20864001 20864019 TTGAACGGCGGATATTGGA 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 2 3 3 97 3R 20924347 20924365 GCTGTGATACTCCATTCGC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 1 3 3 96 3R 20924348 20924366 CTGTGATACTCCATTCGCC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0085001 1 1 6 82 3R 22086922 22086940 CTGGGTGTTTCGTAATCCA 57 22083746 22086879 TGAGATTCGAGTGTAGTTTCAC 58 NA InUTR Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085039 1 1 3 144 3R 22543736 22544055 AAGTGGGAGAACTCCTCAG 58 22544163 22544181 TGGGATCTAGTATTCCGGG 57 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 2 5 5 80 3R 22809871 22809890 CCCAGTATGCCTATGGAAGG 59 22809931 22810009 ACTTAAAGATTTGGCTCTCGC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0085143,FBtr0112834,FBtr0085139 2 4 12 83 3R 22892898 22892916 GGCCAAGGAGTATGAACGT 59 22892377 22892854 GTGTCCGTCCTATTAAAGAGGA 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 1 2 12 95 3R 22892108 22892127 CTAAAGAGCACAATCCCTGC 59 22891942 22892050 ATCGCTCGTCTGAAAGGTC 59 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125 3 1 3 81 3R 23056337 23056355 GCTGATGACCAAGTTGGAG 58 23056151 23056297 CTTATCATGACTCCACTTCTTCTC 58 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 2 4 4 190 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463952 23463971 GAGGTGACGTTCTCAAAGGA 59 NA Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 3 2 2 62 3R 24409532 24409552 GATCTGTTTCCGTTCTACAGG 58 24409490 24409508 CAGCGAATGTCGAATGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085299 2 1 6 88 3R 24425713 24426450 GAGCAAGATGACTCCATCAC 58 24426501 24426519 TTTAGGTTCTCGTCGGTGG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 3 3 5 104 3R 25309373 25309391 ATTTGAACCTGCTGAAGCG 59 25309459 25309690 ATAGAGGAGCGACATTGCT 58 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 1 4 5 82 3R 25297568 25298892 AGAACTTACGACCCTACACC 58 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085555,FBtr0300600 2 2 5 85 3R 25853223 25853242 TAGTGGCGATAGTAATCCGA 57 25853290 25856495 TAGACAAGGCCTTTGATGC 57 NA InUTR Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085555,FBtr0300600 3 2 5 85 3R 25853224 25853242 AGTGGCGATAGTAATCCGA 58 25853290 25856496 TTAGACAAGGCCTTTGATGC 58 NA InUTR Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 1 5 5 80 3R 26212314 26213202 CTATGGAGATTTCAAGTGCTCC 59 26212255 26212273 CCCTTTATGCAGGCATCCT 59 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 2 2 4 97 3R 26643846 26643864 ATAAGGGCTGGTGGAAAGG 59 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 1 2 2 118 3R 26705167 26705185 CACAGAGCCCTATGTCGAG 59 26704956 26705085 TGTTGGTGGACTTTGAGGG 59 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 2 4 4 108 3R 27230212 27230232 CCTCAAATGCCTAAGTTTGTC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 1 4 4 114 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567645 TTGAGCACAATCACCTGAG 57 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 3 4 4 115 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 1 2 2 80 3R 27608523 27608648 GATTGAAGATGAAGAGGAACACTG 59 27608683 27608705 CTAAGGTTGTATAGCACTTGAGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0112864 3 1 22 111 3R 27747383 27784764 GAGTTAAGGTAAGGATCGACGA 59 27707532 27707550 TTGTTATTGTCGGAAGCGG 58 NA Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 1 1 1 60 3R 15212526 15212545 AAGTCATTGGTTCTCTGGTG 57 15212650 15212669 GAGGTAGGAAGTAAACGAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 2 5 6 199 4 323146 325653 TTATAGTCTTCGGGCTGCT 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 2 2 3 104 4 660290 660308 AATCCTATCGAGAACGCAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 1 4 4 80 4 738484 738502 TGACTGACAGCCCTAACAG 59 738544 739908 TAATGGTACTGACTGAGGGAC 58 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100395,FBtr0100396 2 2 4 81 4 728288 731553 GATGATGAATGTCACAGTGGA 58 731596 731614 TTTGCCGTGTTGAATCTGG 59 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089247 2 1 3 80 4 906513 907604 AGGACAGGGACAAGAATGG 59 906451 906472 TATAGAATGGATTGTCACCGGG 59 NA Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 2 2 2 80 4 1161982 1164083 GCTGGGATCATTACGAATGAG 59 1161922 1161941 CCATTTGGCTCTCGATTGAG 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 3 2 4 63 X 227609 227627 CGGATCAGGAAGCTATCCA 58 211928 211946 ATCACCATGTCGCTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 3 4 4 97 X 423509 423527 AATCTCTTGGAGTTCGCCA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0070191 1 1 2 80 X 818944 819022 CTATGAAGGCAATATAGGAACCAC 59 818887 818906 ATGTCGCAGAAATCTTTGCC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 78 X 1965424 1965442 CAAGGAGTACAAGACCACG 57 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 3 3 3 104 X 2236288 2236306 TTGAAACACAATCGTCCCA 57 2236374 2236460 CTCCGCCAGAATATTCCAG 57 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 3 2 3 98 X 2234992 2235011 AGTTGGTCAAACATGTGACC 58 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 3 4 12 122 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215083 TACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 2 1 1 161 X 4543646 4543665 ATACATATTGCCGGTTTGCC 59 4543446 4543464 GTGACTTATTGCCCGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 1 3 3 129 X 4554208 4554298 ACAGATCGTGGTGATATCCAG 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 1 3 4 80 X 5214528 5214601 CAAATAATGGGCTATCCGGG 58 5214467 5214486 ACCATTGTATTCGCTTTCCA 57 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301953 1 2 7 81 X 5277607 5277625 CGGGAACGGTTCTATTGGT 59 5277667 5288094 TCATGAAATCTTTCGCACTGAC 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070844 1 1 2 81 X 5608737 5608757 CGGATAAGGCCATCAATTTCG 59 5605828 5608696 AAACGATCTCGATGAACTGGT 59 NA Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 1 2 2 117 X 5803875 5803955 TGAGATGACCCGATTGCTG 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 3 2 2 119 X 5803873 5803954 ATTGAGATGACCCGATTGCT 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 3 2 2 80 X 6160488 6160507 TACAAGGACCTCATATGGCC 59 6153745 6160445 CGATATCCAGAAACGCTCC 58 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 1 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 1 3 6 105 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 3 1 1 171 X 7769578 7769596 CATTCATGGCATCGAAGGC 59 7769824 7769845 GCAAACGAATGTTAGATTCACC 58 NA DesignNoJunction Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168 1 1 3 89 X 8138084 8140137 CCAAAGGAGGATCCTACGAC 59 8140189 8140207 CTCCATTGAGGACTGCCTC 59 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071169 2 1 3 89 X 8138522 8140141 AGTATAATGGATCCTACGACTACG 59 8140189 8140207 CTCCATTGAGGACTGCCTC 59 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 3 3 3 85 X 9148003 9148021 CAGCAATCCAATGGTCTGC 59 9148070 9148161 AAGCCAGTGAGCAGATCAG 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 1 2 2 80 X 9473559 9473579 GGTACAACTACATCAATCCGT 57 9469064 9473519 CTGTCAGCACATAGATCTTGG 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 1 3 4 88 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 1 3 4 95 X 10393679 10404376 AGGAAGGGACCTTCATAGTG 58 10393603 10393621 AATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 3 2 2 93 X 10806371 10806551 ACATACACAGTCCCAAATACC 57 10806606 10806624 TTCTTCAGACTGCTGTCCT 58 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 2 5 5 151 X 11027593 11027611 TAATGGAAAGGTGCAGGAC 57 11027384 11027478 GAAGATCGAAGACCTTGCC 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073489,FBtr0073485 2 4 15 112 X 11284561 11289280 CAATCTGGATTCGGTGAATGG 59 11289354 11289372 TGTGCGGATTATCCGTACC 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0073547 1 2 4 85 X 11331114 11331132 CATACTTGGAGGTCTCGCA 59 11330817 11331067 GGATACGTTATTCTCCTGCAG 58 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 3 4 4 164 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444962 11445074 AGCTTCAATCCATCTTCTATGC 58 NA Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073683 2 1 2 94 X 12554818 12554837 TGTCTGCTGATATTCTGCAG 57 12554893 12571781 GTGATCGTTCATCGTTACGT 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 2 6 6 83 X 13268113 13268132 CATTCAACCGTTAGACGTCC 59 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 3 5 10 107 X 13493487 13494115 ATGAAGAGTACACCAGCTCC 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451,FBtr0301449,FBtr0112980 1 3 5 82 X 13539830 13543423 TAATTTCGGCATGAGAATGACC 59 13543465 13543484 TCGATGGTATGCGAAATCCT 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535 3 1 8 98 X 13664831 13665172 CAGACATGTGGCTAACTGG 58 13665234 13665325 TTCGTCTCATTGGTGTCCA 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0113318 3 1 2 175 X 14100667 14100687 CAATAACTTTGCCGACAAGGA 59 14099477 14100400 TGGTAACGATGAGCTGTCG 59 NA Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 3 2 2 108 X 15200610 15204426 CATCTGGAGAACATGGAGG 57 15204496 15204516 CAAAGTAGGGAATGTCTTGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 2 2 5 90 X 15265709 15266193 CGTCAGAATGGTGATATCTTCG 59 15265640 15265658 CTTGGTGCTTCTGGATGTC 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 1 5 9 129 X 15714511 15714529 CAGGAAGCAAGTCAGTTCG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 2 4 9 104 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717402 15717420 GCGGAATTCCAGTTTCGTC 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 2 4 9 104 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717402 15717420 GCGGAATTCCAGTTTCGTC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 2 2 2 106 X 16312123 16312141 GATCCGTGTGATCATCACG 58 16311919 16311997 AAGTATCGCCCTTGATCCA 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069 3 1 3 129 X 16326624 16326643 GAATACATCGTGAATGCGGA 58 16326735 16327206 CTTCATCATCGAGTGTCCC 57 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 2 4 4 80 X 16602454 16602473 ATTCTGCCCACAATGAATCC 58 16602514 16602593 GGCATTATATCTTCCTTGGCC 59 NA Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 3 1 1 68 X 17102640 17102658 TTAGTACGTGGTCATGCTG 57 17102751 17102769 GATGTGTATGGGTGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 3 5 6 117 X 17173693 17173777 TGGACCAGATCTACTTGCAG 59 17173857 17173875 TCCTCGAAGTCCTTCTTGG 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991 1 1 6 80 X 17156999 17162560 CCGTGGATATTTGCTACTTCTC 59 17162600 17162619 GGTAGGAGGTCAGACTTGTG 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 2 2 6 68 X 17796067 17796085 AATACGATAGCATCGGGCT 58 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 2 2 2 176 X 17983254 17983336 AAATACAAGCTCAATCCGCT 58 17983097 17983115 AGGAGACCTGAATGTTGGA 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 1 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074594 3 1 2 94 X 18409636 18409654 GTGAGCAGATTCTGGAGCA 59 18409710 18411792 GGGATTGCTTAGATGCTTCTC 58 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 2 2 3 117 X 19157976 19163295 ACCTGCATTCCACTACCAC 59 19163376 19163394 CTTCTACTCGTCCTGTGCA 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 1 2 8 70 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19392909 19400529 TGTTCCTTCTGCTGACAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731 3 1 2 74 X 19492106 19492199 GCGGGAGTATTACGATACG 57 19492234 19492482 CCTTTGGCATAAACATTCTGGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 3 2 2 70 X 19512302 19512320 TGGATAATCTCAGCCAGCG 59 19512188 19512206 GAACTTGGTAACGCACCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091461 1 1 5 101 X 19901794 19902877 TGTCGATAACTCCAGCGTC 59 19901711 19901730 GTAGTCGATAGCGTCGAGTC 59 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091461 2 1 5 102 X 19901794 19902877 TGTCGATAACTCCAGCGTC 59 19901710 19901728 TGTAGTCGATAGCGTCGAG 58 NA Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 1 1 1 64 X 20911412 20911431 TGGTCAAGTTTCTCGAACTG 58 20911142 20911161 GTTGAAGCTGTAGAAGTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 1 4 4 91 X 20989791 20989905 TAATAGAGATGGAGGATCAGAATGG 59 20989952 20989972 CTTCTCACAGAATCCCAAACC 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 1 3 5 94 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887842 21887860 GATCCCGAGCGATGATCTC 59 NA InUTR Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 2 2 2 80 XHet 77306 77325 GACTATATCGCATTCGAGCA 57 77365 77444 GTTCATGTAATCCTTAGATCGC 57 NA Drosophila melanogaster 61 snmRNA:430:CR33740 FBgn0053740 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:22Fa FBgn0012016 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31889 FBgn0051889 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Ac FBgn0011889 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M2:48Ba FBgn0011915 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30218 FBgn0050218 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR33539 FBgn0053539 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3255b FBgn0082927 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD4 FBgn0082919 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A28a FBgn0063386 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V4:90C FBgn0051591 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-31b FBgn0067684 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG40441 FBgn0058441 FBtr0113890 3 1 1 60 YHet 205240 205260 AGCAGCACATCATAAAGTTCG 59 205200 205219 CAACCATCCTTAAAGGCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1135b FBgn0083011 FBtr0113574 1 1 1 60 X 17040537 17040559 GGCTATGTTCTACATACTTTCCG 59 17040499 17040520 TCTTTGGTTCACTATTAGTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111191,FBtr0111192 1 2 2 68 X 22415485 22415503 GATTCGGGTGCTATTCCGA 59 22415672 22415690 TGATGCCCTCCAAGTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 2 2 2 169 X 22246596 22246614 TTTATGTGGCCAGACTTGG 57 22230964 22230982 CCATTCTCTGGACATTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077359 1 1 2 161 X 21942405 21942601 GATATTTATCGTTTCGGTCGGA 58 21942785 21942803 ACATAGCCGCTAGCTTCTC 59 NA InUTR Drosophila melanogaster 61 CG33713 FBgn0064116 FBtr0077227 1 1 2 109 X 21190250 21190269 GTATTTACGCAACGCAACTG 58 21190078 21190096 ACTGTCCACGGTAGATTGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11235 FBgn0031135 FBtr0077281 1 1 1 270 X 20743399 20743417 GTTTCTCCAACGTTCCCTC 58 20746178 20746196 TCTCAAAGTCGTCCGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9578 FBgn0031094 FBtr0070008 3 1 1 144 X 20064663 20064681 GAATCGGCTGGTGTTACAG 58 20064789 20064894 CATTGTCTGCTCGTTACGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15323 FBgn0040784 FBtr0301572 3 1 1 60 X 20004285 20004309 GAATGAGAAGGAATGTAATAGGCTG 59 20004249 20004270 TTCCACTCTGATTACATCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42581 FBgn0260871 FBtr0301573 1 1 1 91 X 19990333 19990407 CTTACACGGAGGAGATCCAG 59 19990261 19990285 GTACAGTATTTCACATTCCTTCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074815 2 1 3 74 X 19635234 19638315 CGTACTCTCGTAACAACAAAGTC 59 19635182 19635200 TGTCTGACGATTTGTCGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Arp11 FBgn0031050 FBtr0074760 2 1 1 81 X 19539718 19539737 TCTGTTCGACTACGACACTC 59 19539606 19539678 CAGTAGATGCTTGAAGAAGATCG 59 NA Drosophila melanogaster 61 CG14222 FBgn0031043 FBtr0074763 3 1 1 80 X 19516416 19516437 AACCTTGGCTACATCATATACC 57 19516287 19516375 CTTTCTCATGTCGTACGCA 58 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733,FBtr0074734 2 2 2 81 X 19504643 19504733 ACCAGAAGCTATTGGTGCA 59 19504777 19504796 AGGAACTCCCGATTGTACTC 59 NA Drosophila melanogaster 61 CG32532 FBgn0052532 FBtr0074778 2 1 1 80 X 19432771 19432792 ATTATCCGGATATTTACTGCCG 58 19428377 19432732 TCTGAAACCAGACTTGAATCC 58 NA Drosophila melanogaster 61 CG8010 FBgn0031008 FBtr0074688 2 1 1 224 X 19161278 19161362 GAAGTATTACAGGCACCGC 58 19161072 19161090 TGGAGCTCTTGATCCTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0113316,FBtr0074678 3 3 3 92 X 19164956 19164974 ATAGGCACCTACCTGTTGC 59 19165026 19165121 CACATTATCATCGGTCTTTAGGC 59 NA Drosophila melanogaster 61 CG7288 FBgn0030969 FBtr0074643 2 1 1 89 X 18753663 18753738 CTTTCCCATCAAGCACGTG 59 18753790 18753809 GCCACCAGATTGTATTTCGT 58 NA Drosophila melanogaster 61 CG6540 FBgn0030943 FBtr0074601 3 1 1 295 X 18542479 18542556 TATAAGTTTCGCCACCTCG 57 18542814 18542833 AGTCATTCGTGTGATAGCTG 57 NA DesignRelaxed Drosophila melanogaster 61 upd3 FBgn0053542 FBtr0113465 2 1 1 83 X 18174204 18177437 CACTAGCAAACAGTTGAACCT 58 18177482 18177500 TTGATGTTGCGCATGTACG 59 NA Drosophila melanogaster 61 e(y)1 FBgn0000617 FBtr0074463 2 1 1 80 X 17736374 17736393 TCCTGAAGGAGCTGAATGTC 59 17736435 17736518 AGGTTACATAGCGGAAGGTG 59 NA Drosophila melanogaster 61 CG12998 FBgn0030829 FBtr0074394 2 1 1 102 X 17113025 17113043 CATTGTACTCTGCGCACTG 59 17113109 17113127 ACTATTCCATCCGGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 3 2 2 114 X 16999008 16999523 AAGTTAAGTCGGAGGTGGAC 59 16998913 16998932 GTATAGAGCTCCTGCTGACC 59 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074385,FBtr0290020,FBtr0074384 1 3 3 242 X 16997709 16997886 TGATGACATTTGGCGTTGC 59 16998092 16998110 ACTCCTTGACGATCTCCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 spheroide FBgn0030774 FBtr0074363 1 1 1 80 X 16595434 16595717 GGAAAGCTAATCGATGCCAG 59 16595373 16595391 CACGTTGACAATCTTGCCA 59 NA Drosophila melanogaster 61 CG33251 FBgn0053251 FBtr0074223 1 1 1 60 X 16206385 16206404 GCGATTGCTTAGATCCACTG 59 16206427 16206445 AGCGGTTCTAGACAATCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074110 2 1 6 137 X 15754270 15754782 AGTTAACACTGCGTTCGTG 58 15754882 15754901 TCTTCCGATAGATGGGTAGG 57 NA InUTR Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074110 1 1 6 136 X 15754270 15754782 AGTTAACACTGCGTTCGTG 58 15754881 15754900 CTTCCGATAGATGGGTAGGA 57 NA InUTR Drosophila melanogaster 61 CG9512 FBgn0030593 FBtr0073979 1 1 1 60 X 14796971 14798009 CTGTTGCTTTCAGGCATCG 59 14796929 14796947 GTTTCACGGGAATTCCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 1 2 4 134 X 14726860 14726880 CATTCGAAGTTCGAAATCCGA 59 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12540 FBgn0030570 FBtr0073929 2 1 1 198 X 14390355 14390582 CAGGAAAGTTCAACGCGTC 59 14390744 14390762 AGTAAACCGACGAATCGCA 59 NA Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 1 2 2 106 X 14117987 14118071 CAGAACAATTACAGTTCGACCT 58 14118138 14118156 TGTTGCGTCATGATGTCCT 59 NA Drosophila melanogaster 61 CG11092 FBgn0027537 FBtr0073828 2 1 1 80 X 13718182 13718201 GAGGGTCAGCTAAAGTTGGA 59 13718243 13718335 CAATACGACGTATACCGCCT 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535,FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 8 8 85 X 13663019 13663038 ACTATTATCCGGACAATGGC 57 13663083 13663187 GTCAATTACGTCTACGATACGA 58 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 3 4 4 81 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 CG11158 FBgn0030511 FBtr0073812 3 1 1 64 X 13577171 13577189 AATGGAACACTGAATGCCC 58 13577217 13577292 CTAAAGACCGGAACATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG15760 FBgn0030508 FBtr0073810 1 1 1 80 X 13567149 13567167 CCGGTATATGGCGAATAGC 58 13567211 13567293 CTTTCGGGTAGCATTCCTG 58 NA Drosophila melanogaster 61 CG11816 FBgn0030495 FBtr0073785 3 1 1 101 X 13447286 13447454 GAGGAGTACAAATTGGTGATGAG 59 13447207 13447225 ATTGTAGCCCTCCTGAACG 59 NA Drosophila melanogaster 61 CG1662 FBgn0030481 FBtr0073776 1 1 1 64 X 13282435 13282453 AAGATGCTGGACAAACGGA 59 13282481 13282499 TCGAGCACGATCTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15744 FBgn0030466 FBtr0073756 3 1 1 81 X 13182644 13182730 CAGTATTGTCAGCATCAATGC 58 13182770 13182791 CTTGAGTTCCGTAAAGTTTCGA 59 NA Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 2 2 2 80 X 13114116 13114135 AAGGAGGATCAATGGATGGG 59 13113903 13114073 GCAGACGATTACCTTTCCG 58 NA Drosophila melanogaster 61 CG2453 FBgn0030460 FBtr0073737 2 1 1 80 X 13087654 13087729 GTGGATAAGGTTCTTTCTGAAGC 59 13087596 13087615 CGTCAGATGACTGAACTCCA 59 NA Drosophila melanogaster 61 CG4395 FBgn0030437 FBtr0073753 3 1 1 84 X 12848444 12848464 GTGTTCCGATACCAGAATGTC 58 12847849 12848400 GCAAATCGGAATCGTAGTCTG 59 NA Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073687 1 1 2 81 X 12639828 12639847 GAGCTTTATTGTGAAGCGAG 57 12639891 12640910 GTCAACATCTTCGGTCTCC 58 NA Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 2 1 1 107 X 12271420 12271438 AGAACTCAGTGTCCTGCTG 59 12271222 12271349 AAGATGAAGACCTGGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15738 FBgn0030352 FBtr0073572 1 1 1 80 X 11786426 11786771 TTAGCGGCCATCAAATTGAG 59 11786812 11786832 GCTCAAAGCACTTGTCTATGG 59 NA Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 3 2 2 80 X 11450006 11450024 TTCTGTTTACTCCTCGCCT 58 11449814 11449966 GTGGTAAATCAGCTCATAGATCG 59 NA Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073504,FBtr0073503 2 2 2 71 X 11376585 11376603 CCACTACTACGCCTTTGTG 58 11376734 11376752 TTGAGCATCGCATACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11106 FBgn0030280 FBtr0073446 2 1 1 67 X 11096612 11096630 CTGTCCTCAATTCCGGGAG 59 11096661 11096679 TATCCATGCCGTTGTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11122 FBgn0030266 FBtr0073481 3 1 1 300 X 11015205 11015223 TCTCTATCGCCACATGCTG 59 11014862 11014941 AATGGATTCAGCATCGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2157 FBgn0030244 FBtr0073382 1 1 1 115 X 10764129 10764226 TGGATTAGATGGTGCTGCA 59 10764305 10764323 TAAGTCCCGATCCATAGCC 58 NA Drosophila melanogaster 61 CG15296 FBgn0030215 FBtr0071512 2 1 1 60 X 10460494 10460515 ACTACACTGATGTATCGAACTG 57 10460455 10460476 CAACTCGATTGGTTATGTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 2 3 4 96 X 10393679 10404376 AGGAAGGGACCTTCATAGTG 58 10393602 10393621 TAATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 2 2 2 111 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359181 10359199 CGTAGTTCTTGTGATGCGG 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0302373 2 1 3 184 X 10266104 10266122 TTTCATCCTGTCGAGGCAG 59 10265681 10265699 TCATCGTCATTGCCATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32679 FBgn0052679 FBtr0071469 2 1 1 101 X 10261402 10261422 AACTATTGCGATCCAGAACTG 58 10261189 10261207 ATCCACTTGGACAAACTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15314 FBgn0030172 FBtr0071417 2 1 1 80 X 9942098 9942116 ATTATCAACTCGCCGACGT 59 9942160 9942178 GTATTTGGAGGTCGTCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0071415 3 1 2 145 X 9905015 9905034 GATAAGGAGCAGGGCTACTG 59 9905138 9905217 CCAATGACCATAACAGAGTTTCC 59 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 2 2 2 93 X 9783064 9783082 GCATATACGACACAAGCGC 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302154 3 1 2 207 X 9366211 9366229 ATTCACAGCATCACAGCAG 58 9319487 9366042 GTGTATTTACCTGGTGATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG16892 FBgn0030122 FBtr0071319 2 1 1 136 X 9168709 9168964 AGAGTCTGCTATCCTCTTCG 58 9169063 9169081 ATAATTGCCATGCGGATCC 58 NA Drosophila melanogaster 61 Dip1 FBgn0040467 FBtr0071302 1 1 1 180 X 9053048 9053066 GGTGGAACCGAAGAATGAG 58 9053271 9053291 CTTGTGCGAGAACTTTAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0071284 3 1 2 92 X 8975103 8975209 GGATGGTAGAAAGGTTTCAGC 59 8975263 8975281 AGATGGCAACTCCATGGTC 59 NA InUTR Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0100003 3 1 2 291 X 8364999 8365424 GCATTCAATTGTTGATGGCG 59 8366370 8366388 TTTCCGTACACGGATCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12116 FBgn0030041 FBtr0071240 3 1 1 60 X 8362563 8362583 GTGACAATCGGAAAGTTGGAC 59 8362523 8362541 ATGCCTGTTCCATTAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slpr FBgn0030018 FBtr0071184 1 1 1 85 X 8070106 8070124 AAATCGTTGTGGTCCTGTC 58 8069979 8070057 GACACCGACCTTATCTCCA 58 NA Drosophila melanogaster 61 CG2260 FBgn0030000 FBtr0071194 1 1 1 127 X 8013314 8013395 AGCGAAAGGAGTTTATTGCC 59 8013206 8013224 GAAACGATCCAGAACGGAG 58 NA Drosophila melanogaster 61 CG1571 FBgn0029993 FBtr0071106 2 1 1 98 X 7971657 7971675 ACACTGGATGAGTCCATGC 59 7971799 7971818 AGCCTCCAGTAGTTTACACC 59 NA DesignNoJunction Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 1 1 1 75 X 7966201 7966219 TAATGCTCAGGATCCGTCG 59 7966080 7966162 AGAATCCTCATCAGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100214,FBtr0300838,FBtr0300843,FBtr0100208,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100217,FBtr0100207,FBtr0300839,FBtr0300840,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 21 21 81 X 6979497 6979515 CACATCGGAAATGGACTCG 58 6979364 6979453 ATAGGAAACCTTAAGCCGCT 59 NA Nonspecific Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 3 2 2 81 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187708 6187726 CTTGCGCTTCAGGAAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG4119 FBgn0028474 FBtr0070799 1 1 1 85 X 5560755 5560773 CTCAAACGCATCCTGAACG 59 5560821 5561251 ATAGGTCCGTCAAATTCGCA 59 NA Drosophila melanogaster 61 Vsx1 FBgn0029775 FBtr0070781 3 1 1 97 X 5489113 5500125 TCAGTTTGCAGAACAAGCT 57 5500186 5500204 AACTGCTATTCTTGCTGGG 57 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949 1 1 5 104 X 4826656 4826676 GTTGTTCTCCTCAACTAACCT 57 4824090 4826592 GCATTTGTGCTCAGATAAACC 58 NA InUTR Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706,FBtr0070707,FBtr0070704 3 3 4 295 X 4582705 4585687 GTTACCAAGGAGAACCGCT 59 4592397 4592416 ATACGATCCAAAGTTGCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 2 3 3 81 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372229 4372247 TCAGGATGTCATTGGCTCG 59 NA Drosophila melanogaster 61 Muc4B FBgn0052774 FBtr0070662 2 1 1 172 X 4139681 4139798 TGCCGTCACTTTGTTTAACTG 59 4139529 4139551 GGATTCTGTAGTATTTGATGCCG 59 NA Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 3 1 1 77 X 3982321 3982342 AATGATGCGACTTAAGTCAGAC 58 3982380 3983879 CTCAATGGAGAAGCCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 AlstR FBgn0028961 FBtr0070575 2 1 1 86 X 3539718 3539738 TCGTATCCACAATAGTTCCCG 59 3539785 3549622 CCACAACCACCAGAATAACC 58 NA Drosophila melanogaster 61 Pig1 FBgn0003086 FBtr0070537 2 1 1 60 X 3142992 3143014 GATGATACTGATTCTGGATCCGA 59 3142954 3142975 TAACAACTGGAGCTGTAGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 3 12 12 80 X 3228356 3228597 TCGCTTAAGTTCAAACGCA 58 3228640 3228659 TTCGGAAATCTGATTTCCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 1 12 12 80 X 3228355 3228597 GTCGCTTAAGTTCAAACGCA 59 3228639 3228658 TCGGAAATCTGATTTCCCGA 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344,FBtr0070345,FBtr0070343 3 3 3 81 X 1921370 1921388 AGCCTTTGAGTCTGACCTG 59 1920933 1921326 CTCCAGAGTGTTAAGCTCCT 58 NA Drosophila melanogaster 61 dor FBgn0000482 FBtr0070269 3 1 1 83 X 1561635 1561715 GCTTCGCATAGCTTATCACG 59 1561761 1561779 CGTAAGAGATCGCACTCCT 59 NA Drosophila melanogaster 61 futsch FBgn0259108 FBtr0300225,FBtr0112628 1 2 2 100 X 1327435 1327516 TAACATGCTTGTTGACGGC 59 1327580 1327598 TGTTTAGGCGGGTCATCAG 59 NA Drosophila melanogaster 61 CG14624 FBgn0040357 FBtr0070204 3 1 1 72 X 1101052 1101070 CAGTTCCACAGGATCAACG 58 1101106 1101124 TATGCCTGCTGGAATTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11638 FBgn0040351 FBtr0070183 1 1 1 80 X 909222 909242 GGATACATAACAGCCTCTGAC 58 909102 909180 CATGTCCTCAATGTCCTCC 57 NA Drosophila melanogaster 61 CG3704 FBgn0040346 FBtr0070188 3 1 1 145 X 834106 834192 TGAACAAGATCGACCTAAAGGA 59 833982 834000 CTCGTAGAAGGTGTCCAGG 59 NA Drosophila melanogaster 61 CG32815 FBgn0052815 FBtr0070166 3 1 1 85 X 828489 828507 GACGTACTTCCAATGGAGC 58 828622 828640 AAATCACTCCGATGAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 2 2 2 80 X 818647 818787 GGACAACACAGTCAATATCCA 58 818587 818605 TAGTAGATGTAGCGCAGCA 58 NA Drosophila melanogaster 61 CG13359 FBgn0025616 FBtr0070145 2 1 1 60 X 697379 697399 CAGCGGTTAATTCCCTATGTC 58 697339 697359 ACCACACTACCATATCCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070129 1 1 8 89 X 550760 551139 CGTTTGTTATCTTTGAAAGCCC 58 551189 551207 TTGGCGATCTGGATATCCG 59 NA InUTR Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328,FBtr0070077 1 2 2 86 X 373901 373919 GATGGATCTCTGCGAGGAG 59 373966 374071 CGATTACCAAATAAAGTCACGC 58 NA Nonspecific Drosophila melanogaster 61 Su(Ste):CR42411 FBgn0259842 FBtr0300141 3 1 1 126 U 6390253 6390273 CAATGTTCTAGGGATGACGTG 58 6390361 6390379 TAGTAGGTGATAGCTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32010 FBgn0052010 FBtr0089181 3 1 1 82 4 34123 41608 GCTGTTTGCTAAGGATATTCCA 58 34062 34080 CGCTTATTTGTGGAAGCCT 58 NA Nonspecific Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 3 2 2 81 4 822725 823031 AAAGTCATGGGAGAGTGTGG 59 822663 822684 TTTACTGAGTCACGACTCACTC 59 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 3 3 3 81 4 87357 87476 GACAAGTACAGGTCGATGG 57 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 1 3 3 80 4 87356 87475 ACAAGTACAGGTCGATGGT 58 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 CG1635 FBgn0039854 FBtr0085796 2 1 1 81 3R 27414943 27414963 AATATGTGACCTATCTGGGCA 58 27415006 27415083 TTATGACAGCACCAAGCAG 58 NA Drosophila melanogaster 61 bnk FBgn0004389 FBtr0085754 2 1 1 60 3R 27019569 27019587 TTTGAGTCGGGTTTCAGCA 59 27019611 27019629 CTATGAAGCGGTTGTTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9737 FBgn0039758 FBtr0085639 3 1 1 80 3R 26068275 26068296 ATGATCGTCATATCCTAACAGC 58 26068152 26068235 AACGCACATGCTTTAATCCT 58 NA Drosophila melanogaster 61 Sry-beta FBgn0003511 FBtr0085556 1 1 1 80 3R 25865599 25865671 TGATAGAAGGCTGCATTGTG 58 25865712 25865732 GCTGGTTTATGATCTTCTCGA 58 NA Drosophila melanogaster 61 janB FBgn0001281 FBtr0085598 2 1 1 186 3R 25864033 25864108 TGTTGACAATCACTTGGCG 59 25863804 25863826 CGCTTGAAGTATATTCCTTGTCC 59 NA Drosophila melanogaster 61 trp FBgn0003861 FBtr0085513 1 1 1 80 3R 25741480 25741560 CCCAGTTGATTGAATTCAATCC 58 25741421 25741439 TCTTCCGCATGAACTTGAC 58 NA Drosophila melanogaster 61 Ice FBgn0019972 FBtr0085482 1 1 1 60 3R 25626013 25626032 GAAGTGACCGTGTACAAGGA 59 25626054 25626073 CTGCATACTCGATTGTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085467 1 1 2 223 3R 25458577 25465963 TTCCAAATCGCAGTGTCAC 58 25458372 25458390 ATCTAGTGCAGGATCGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11874 FBgn0039634 FBtr0085416 1 1 1 80 3R 24936592 24936670 CCATTTATGAACAGGTTGCTC 57 24936532 24936550 TGAATATGGGCACCAAACC 58 NA Drosophila melanogaster 61 CG12558 FBgn0039599 FBtr0085311 2 1 1 60 3R 24616352 24616372 CAGCCCTATCAGATAGTTCGT 59 24616392 24616412 GTGATCTCTGGTAGGGATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 1 3 3 93 3R 24168448 24168466 CAGGATGATGACGAGGACC 59 24168520 24168611 TGTTCGATACCTCTGGTATCTC 59 NA Drosophila melanogaster 61 RpL4 FBgn0003279 FBtr0085248 2 1 1 100 3R 23749455 23749873 TCCAGAAGGTGTACAAGTCG 59 23749936 23749954 CTTGTCGTAGACCACCAGG 59 NA Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 2 1 1 134 3R 23516579 23517465 AAGGTCTCGTTTCCCTTCAG 59 23517562 23517580 CAGCAGTCTATTGCGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Sce FBgn0003330 FBtr0085245 3 1 1 135 3R 23506476 23506494 GATTTGCCAGAGGCTTGTC 59 23506302 23506380 CCATAGGTTTGTTTACCTTCCA 58 NA DesignRelaxed Drosophila melanogaster 61 Gr98c FBgn0046886 FBtr0085187 1 1 1 80 3R 23370973 23370991 GACTTACCATTCTGCACGT 57 23371034 23371109 CCAAACGATTGAGTTGACAG 57 NA Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 1 2 2 93 3R 23212947 23214186 GAATGATCAGGCGACATCTG 58 23212873 23212891 TTGATATTCACGTCCCGGT 58 NA Drosophila melanogaster 61 CG14257 FBgn0039479 FBtr0299564 2 1 1 103 3R 22905115 22905610 ATCACGAGACGATCACCAC 59 22905677 22905695 CGGAAGGTACTGATGGGTG 59 NA Drosophila melanogaster 61 CG31091 FBgn0051091 FBtr0084941 1 1 1 89 3R 21727251 21727335 GAACTAATTCGACCGCCTC 58 21727388 21727406 GATGCTCCTGCATGTAGTG 58 NA Drosophila melanogaster 61 BG642167 FBgn0250831 FBtr0110770 2 1 1 72 3R 21632230 21632248 TTCCTTTCAGCATCAGGCA 59 21632416 21632435 CGAATCCGTATCATCCTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Dhap-at FBgn0040212 FBtr0084897 3 1 1 83 3R 21314298 21314316 GGACTTCATCCTGATGTCC 57 21313981 21314251 ATGGAGTGGAAATCCATGC 57 NA Drosophila melanogaster 61 CG31437 FBgn0051437 FBtr0084834 1 1 1 103 3R 21209455 21209547 AATATTGGTGATCTTGGGCCT 59 21209609 21209630 CCTCGACATCTATATCCAAGCT 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113353 2 1 5 160 3R 21149169 21153867 AAACTACATCCAACGGAGAG 57 21149028 21149047 TAATTAAAGTCCAGGGCACC 57 NA Drosophila melanogaster 61 CG31098 FBgn0051098 FBtr0084863 2 1 1 80 3R 21117522 21117541 AGCTAAACTACCAGGGACAC 59 21117403 21117481 CAATGACACCCATAAGACTGG 58 NA Drosophila melanogaster 61 CG13650 FBgn0039277 FBtr0113286 2 1 1 83 3R 20936665 20936686 CCTTACTTCGTGTCATATGCTC 59 20936540 20936623 AACTTGCAGCTTGTTTAGGTC 59 NA Drosophila melanogaster 61 CG31111 FBgn0051111 FBtr0084790 3 1 1 95 3R 20881597 20881766 TTATCTACTGGAGAACGCCG 59 20881521 20881544 CGCTCTATCAAGTAAAGTCTTTGG 59 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 3 2 2 84 3R 20682414 20682485 ACTTCACCTACCAAGGTTCG 59 20682349 20682367 GGAACATCGAGAGGAGTCG 59 NA Drosophila melanogaster 61 nAcRalpha-96Aa FBgn0000036 FBtr0084619 2 1 1 94 3R 20238296 20238315 TGGAATCCGGATGACTATGG 59 20233212 20238240 CCATCGGCGTTGTTATAGAG 58 NA Drosophila melanogaster 61 CG33341 FBgn0053341 FBtr0084613 3 1 1 145 3R 20194617 20194635 AAATGGACCACTCCTTCCC 59 20194742 20194820 ATGCCAATCAATGAACTGAGC 59 NA Drosophila melanogaster 61 CG33340 FBgn0053340 FBtr0084611 1 1 1 60 3R 20189249 20189269 GCTTCGACGATATCTACTACG 58 20189291 20189309 CATGTCTGCCAGTACTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BRWD3 FBgn0011785 FBtr0084604 2 1 1 85 3R 20146560 20146579 CTTAAGGGACTACTGCACCC 59 20146626 20146706 GAACGCGATCTAAGTTGTGG 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 2 5 5 80 3R 19792358 19792377 CCAACATACTGTCACCACTG 58 19792417 19798183 GATAAAGTTGCAAACTTCGCAG 59 NA Drosophila melanogaster 61 AP-1sigma FBgn0039132 FBtr0084496 2 1 1 192 3R 19785066 19785086 ATCATTCATCGCTATGTGGAG 58 19785307 19787782 GGGTCTCATCCTCTTGGAG 58 NA Drosophila melanogaster 61 Nup98 FBgn0039120 FBtr0084460 2 1 1 80 3R 19602592 19602668 GCACATTATGAGGAGACATCG 59 19602532 19602552 GACAGGCATTTCAAACTTCGT 59 NA Drosophila melanogaster 61 CG10214 FBgn0039115 FBtr0084463 3 1 1 60 3R 19592737 19592759 CCTATCTCGAGAAGAACATACCA 59 19592699 19592717 GTGTAGACGGAGTTCCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6688 FBgn0039038 FBtr0084343 3 1 1 93 3R 18838523 18839646 CGTTCTGGAGGTAAATGGC 58 18839703 18839721 GAGAATTGTGACGCAGTCC 58 NA Drosophila melanogaster 61 Irp-1A FBgn0024958 FBtr0084327 1 1 1 80 3R 18550000 18550091 CAGCAAATATGAGTCACTGCC 59 18549940 18549960 AGCACATGAAAGTTGTCACAG 59 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 1 2 2 81 3R 18523054 18523133 CATCCGGCAGATTTATGAATCTC 59 18523174 18523192 AATAGCTCCATCCAGTGGC 59 NA Drosophila melanogaster 61 CG7077 FBgn0038946 FBtr0084205 1 1 1 80 3R 18178178 18178256 GTGGAACTCATTGAGGCAC 58 18178297 18178318 TTCATCATTGAGGTCACATTGC 59 NA Drosophila melanogaster 61 CG5391 FBgn0038943 FBtr0084242 1 1 1 80 3R 18159404 18159706 ATACACAAATGATCCTGCTGAG 58 18159345 18159363 TGGTTCGACTGTATCGAGG 58 NA Drosophila melanogaster 61 CG3822 FBgn0038837 FBtr0083987 3 1 1 84 3R 16688501 16688519 CTTCAGTCAGAAGCAGCAG 58 16688375 16688457 GCAGTACGGATTACTCAATATGG 59 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 3 2 2 108 3R 16417315 16417398 AAAGCTTTCTGGATCCTTCG 58 16417226 16417246 TGACCCTTAACCTTAAGTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5412 FBgn0038806 FBtr0083909 3 1 1 128 3R 16403301 16403379 AAAGAAGTTGACCTCCATCC 57 16403470 16403488 GTCTGTCCGTAGATGTGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 1 2 2 88 3R 16333758 16333776 TATTTGCTGGATCCCACGT 59 16333615 16333708 TGATTAACGGCAAATCCAGAC 59 NA Drosophila melanogaster 61 CG5023 FBgn0038774 FBtr0083866 1 1 1 168 3R 15995229 15999817 AATTCACAATGGCTCCACG 58 15999949 15999967 ATCTTCTTCACCGATCCGG 59 NA InUTR Drosophila melanogaster 61 CG4459 FBgn0038753 FBtr0083849 3 1 1 150 3R 15753384 15753546 CCGGGCAATTTATATTGAACGA 59 15753255 15753273 GAGATGGCCACGTAAAGGT 59 NA Drosophila melanogaster 61 CG4770 FBgn0038751 FBtr0083822 1 1 1 80 3R 15744672 15744693 TTTAAATGAGTCCGACAGATCG 58 15744731 15744814 TCATTGAATCGTACTGTTGCTG 59 NA Drosophila melanogaster 61 CG16727 FBgn0038719 FBtr0083780 3 1 1 80 3R 15440006 15440084 ATGTACATCTTGGTCTTCGAG 57 15440126 15440144 GCAGTAGAATACAGCCAGG 57 NA Drosophila melanogaster 61 CG31404 FBgn0051404 FBtr0083774 1 1 1 60 3R 15201279 15201299 GGGAAAGGATGTTGATGTTGG 59 15201239 15201260 TCAGGCGTATTATACTTCTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42359 FBgn0259705 FBtr0299958 2 1 1 287 3R 14987838 14987857 TATTTGCAGAGAAGCATGCC 59 14987494 14987512 ATCGGTGTGATAACCTGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637,FBtr0290107 2 2 5 125 3R 14399185 14399203 GTTCCCGTGTGAAATTGCT 59 14412043 14412063 CTCTTTCTTGGGATTCTTTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0290209 3 1 5 80 3R 14411687 14412011 TTCATTCAATAGGTGGCACAC 59 14412051 14412071 CTTCGGATCTCTTTCTTGGGA 59 NA InUTR Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307,FBtr0083586 1 2 2 81 3R 14190592 14190610 CATGAGCAAGTGGCATGTC 59 14190473 14190553 GATAACCTGACCAATATAGACATCG 59 NA Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 1 2 2 97 3R 14113251 14113326 AAGCTGTCCTATCAACCGA 58 14113172 14113190 GTGGTCATCGCATACATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18599 FBgn0038592 FBtr0083571 1 1 1 162 3R 14096186 14096322 AACTCAAGTCGGATTCTCAC 57 14096446 14096465 TCCGTTAACTTTAGGGTGTG 57 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611,FBtr0083613 1 2 3 228 3R 14024463 14024483 TCAAAGTATTAGGGCGTTCAC 58 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Arp5 FBgn0038576 FBtr0083557 3 1 1 80 3R 14011979 14011997 ATCCTACGGCATAGATGCG 59 14012099 14012117 GAAATGATCAGGGCATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14323 FBgn0038529 FBtr0083498 1 1 1 60 3R 13447746 13447764 AAACCGACTTGGATGTGGA 59 13447704 13447722 CGTCCATCGATTGGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mur89F FBgn0038492 FBtr0083413 3 1 1 123 3R 12979697 12979716 TACCAAGACAAGTCCTGCAG 59 12979517 12979614 TGCTGATTTGAACCACATTCTG 59 NA Drosophila melanogaster 61 CG3534 FBgn0038463 FBtr0083370 3 1 1 94 3R 12824614 12824632 AATCCTTGTCACAGGAGGC 59 12824687 12824767 ATCCTTCATCCTGGATATGGAC 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 1 5 5 111 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377352 12377370 GAAGCGGATACATTGACGC 59 NA Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 2 2 2 92 3R 12256831 12256849 CGATGGGAAGGATCTTTGG 58 12256905 12257013 TGTACAGAGACACAGTGGG 58 NA Drosophila melanogaster 61 CG42446 FBgn0259917 FBtr0300198 3 1 1 96 3R 12185481 12185502 AAGGGAATACGATGAAATGAGC 59 12185352 12185429 GTTGTACATAGAGTCTCGTTTGTC 59 NA Drosophila melanogaster 61 Sb FBgn0003319 FBtr0083250 3 1 1 165 3R 11967140 11967158 CCTTGTGATTCGTCCTTCG 58 11967285 11967397 CCAAATGCTATTGGGATTCGA 58 NA Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0083240 3 1 2 94 3R 11789257 11789328 ATCAATCGCTAGCCATGGA 59 11789181 11789200 CTTGGTTAGTGCTTGCATGG 59 NA InUTR Drosophila melanogaster 61 Hmt-1 FBgn0038376 FBtr0083188 3 1 1 80 3R 11681651 11681732 TCGCAAGAAGTTGGTTGAC 58 11681589 11681609 GACAATGCCACATAGATCAGC 59 NA Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162,FBtr0083161 3 2 2 264 3R 11492269 11492289 CTTGACAAATATCCGTTGGAC 57 11497691 11497711 ACAGTTCCATCATATCCAGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL9 FBgn0038319 FBtr0083084 3 1 1 90 3R 11156484 11156502 GAACATCTACGTAACGCCG 58 11156613 11156631 ATATTTGCGCTTCAGGACG 58 NA DesignNoJunction Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963,FBtr0089962,FBtr0089961,FBtr0089965 3 4 13 105 3R 11115110 11115128 CAACATCATCCGCAACGAG 59 11120870 11120888 GTCTTCTTCGAGCAACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 1 2 3 84 3R 11084154 11084239 CATTGGCGTTTGATTGGCT 59 11084088 11084107 TCTACTTCTTTGCCACCTGG 59 NA Drosophila melanogaster 61 CG14861 FBgn0038280 FBtr0083023 3 1 1 60 3R 10840740 10840761 GTTCAATGAATCTGATGAGGAG 57 10840780 10840800 AAAGGATGTACCAGAACTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycC FBgn0004597 FBtr0083010 1 1 1 83 3R 10715119 10715199 CTTACCAGATCGCTATAGCCT 59 10715056 10715074 TCAATTCTGCGAACCACTG 58 NA Drosophila melanogaster 61 l(3)L1231 FBgn0086686 FBtr0082975 2 1 1 99 3R 10471110 10471255 CACTAACGATGCTGATGATATAGC 59 10471034 10471052 GTTGAAGGCATCGTCTGAC 58 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 3 3 3 99 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142581 10142671 CAAGGGAACTCCTATTGTGC 58 NA Drosophila melanogaster 61 CG14839 FBgn0038219 FBtr0082920 3 1 1 60 3R 10088811 10088830 ACAAGACGGCACTATTAGAG 57 10088852 10088871 CTAAGTTGCCGCATTAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283,FBtr0301351 1 2 2 82 3R 10030022 10030040 GTTAGCGATTGCGGATCTC 58 10017576 10029978 CAAAGATCCAATATCCCAGCA 58 NA Drosophila melanogaster 61 CG42500 FBgn0260226 FBtr0300627 1 1 1 148 3R 9978178 9978196 GTTCCTGTAGGACACGGAG 59 9978048 9978067 CCAGAATGACCATGAACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14356 FBgn0038207 FBtr0082908 2 1 1 189 3R 9957729 9957748 TAACGTCTGTGATACTCCGT 58 9956906 9956924 CAGTAGGAAGCCGATTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cht5 FBgn0038180 FBtr0082826 2 1 1 85 3R 9594693 9594802 AGAAACTGAATGTGAACGACG 59 9594849 9594867 GTAGAAGGGAACACCCACC 59 NA Drosophila melanogaster 61 CG31469 FBgn0051469 FBtr0082844 3 1 1 80 3R 9535092 9535171 CCATACTTTATTCAAGGCATGG 57 9535033 9535051 ATGTTGCAGAAATCGTTCG 57 NA Drosophila melanogaster 61 CG9796 FBgn0038149 FBtr0082760 3 1 1 90 3R 9225295 9225313 TACGGAGCAGGTATATCCG 58 9225146 9225243 GGTAACGAACTGAGACTTTCC 58 NA Drosophila melanogaster 61 Lip3 FBgn0023495 FBtr0082771 2 1 1 88 3R 9196572 9196590 AGGCCACTTCTCCTTATGC 59 9196425 9196520 AAGGAGTTCGTAGTCCAGC 59 NA Drosophila melanogaster 61 CG10898 FBgn0037911 FBtr0082410 3 1 1 130 3R 7384369 7384387 GCTTCTGATGATCGAGGAG 57 7384551 7384571 CATTTAGACCAGTCTCTTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG17187 FBgn0037882 FBtr0082365 2 1 1 69 3R 7057289 7057307 AATCCGGACAATCCGAAGG 59 7057238 7057256 CATCCGTGAGGATCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 2 2 2 80 3R 6819262 6819280 TATGCCTGATCATGGGAGC 59 6819324 6837750 GCAGGATTTCACCATCTGG 58 NA Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082331 1 1 2 81 3R 6714835 6714854 GAACGAGAATTGCTACCGAG 58 6714051 6714791 CAACCTCTCCTTGAGACGG 59 NA InUTR Drosophila melanogaster 61 CG6574 FBgn0037846 FBtr0082297 3 1 1 80 3R 6687496 6687515 TCACTTCCCAACTTATGCTC 57 6687377 6687454 CTATAATCTGAGTGCCCAGC 58 NA Drosophila melanogaster 61 CG31373 FBgn0051373 FBtr0082318 1 1 1 107 3R 6534855 6534874 GCTGCGTATTATCGTTATGG 57 6534610 6534785 TTAATGAAGACGGCCAAGG 57 NA Drosophila melanogaster 61 CG6254 FBgn0037794 FBtr0082184 2 1 1 93 3R 5985595 5985614 GATCACAAACTTGTGCACAC 58 5985458 5985542 CTAAATGGATCTTTAACCTCGC 57 NA Drosophila melanogaster 61 CG3909 FBgn0027524 FBtr0082172 1 1 1 110 3R 5869713 5869788 TTAGCATTGCCTACAGTCC 57 5869862 5869880 GTCCTTCCAATGTTTGCAC 57 NA Drosophila melanogaster 61 CG8526 FBgn0037759 FBtr0082142 2 1 1 85 3R 5627499 5627517 GATTGAGTTCTGCCCACTG 58 5627564 5627645 TGTATGTCTTTCCCACTTCGT 59 NA Drosophila melanogaster 61 CG12945 FBgn0037755 FBtr0113214 3 1 1 82 3R 5616084 5616103 CAATTGTACTAGGAGGCGTG 58 5615967 5616045 CATCCTATCGATGTCTAATTCTCTG 58 NA Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 2 2 2 80 3R 5575746 5575767 AAGGATATGGGCTATGAAGTGG 59 5575804 5575882 GCCCATAGTATCACAATAGTTCG 59 NA Drosophila melanogaster 61 Crc FBgn0005585 FBtr0082103 3 1 1 97 3R 5456237 5456257 GGATCTACAGCAAACATCCTG 58 5455892 5456178 GGTCTGAATGCCTTTGTCG 59 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 1 2 2 96 3R 5320657 5320736 TGGAGGAGAATCCTCACAC 58 5320796 5320814 CTTGTATCGACCTCCTCCG 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 Or85f FBgn0037685 FBtr0082028 2 1 1 80 3R 5224935 5225005 CAAGTTCTCGACTTGAGCG 59 5225047 5225067 CCTCTTGTACGCTATAGAAGC 58 NA Drosophila melanogaster 61 CG11982 FBgn0037653 FBtr0081965 2 1 1 60 3R 4832962 4832982 AAATAGTAACTGGACCCGGTG 59 4833003 4833022 AAGAACATGTGCGAGTTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11964 FBgn0037644 FBtr0082015 3 1 1 92 3R 4768858 4768939 AGCATAATGAGGGAATACGCT 59 4768786 4768810 ACGATCGACTAGAGATAATATGTGG 59 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0113206,FBtr0301787,FBtr0081957 3 4 4 83 3R 4767547 4767634 GTCTTCAGGGAACCAAAGTC 58 4767680 4767698 TATCTAGATCATCGCGGGC 58 NA Drosophila melanogaster 61 CG8021 FBgn0037602 FBtr0081878 1 1 1 63 3R 4476869 4476887 AAATTGTTCGTCGGCAACC 59 4476914 4476932 TTGAGAAGTAGGTCCGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7443 FBgn0037577 FBtr0081837 2 1 1 126 3R 4150143 4150213 CTCTGTCAAGACGAAACGC 59 4150356 4150374 AACTACCGTGCAGTTACGA 59 NA Drosophila melanogaster 61 CG11694 FBgn0037571 FBtr0081859 2 1 1 60 3R 4137290 4137310 GATCAGCTGAACACCATTACG 59 4137250 4137269 CCGAGTTGACCACATTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpA-70 FBgn0010173 FBtr0081867 3 1 1 108 3R 4089985 4090064 TGATTGCTCGCATTATGCA 58 4089895 4089913 ATTAGGATGCGATAGCGCT 59 NA Drosophila melanogaster 61 CG7918 FBgn0037546 FBtr0081789 2 1 1 80 3R 3908804 3908822 GTGGACAGGAATATTCGGC 58 3908865 3908952 CGAAACGGTTCCTATTAGCA 58 NA Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 2 1 1 61 3R 3638322 3638555 GGGTACAAGAGTTGGTCAC 57 3638578 3638598 CATCACACGAATCATAAACCC 57 NA DesignNoJunction Drosophila melanogaster 61 alpha-Est5 FBgn0261393 FBtr0081547 2 1 1 83 3R 3361246 3361462 TTGTTTGGGATTCCTATCGC 58 3361182 3361200 TTGAGAGCTAGCACTTGGT 58 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551,FBtr0081550 2 2 2 81 3R 3346281 3346299 CCTGGAGTAACTCCATCCC 58 3346156 3346237 GGCATAAGCTTTACCTCTGG 58 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 2 2 2 96 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322510 3322528 ACTGTAACATTCCCGTGAG 57 NA Drosophila melanogaster 61 CG14608 FBgn0037487 FBtr0113201 2 1 1 80 3R 3063310 3063395 GATTGTCAGGTCTTTCATATCTGTG 60 3063433 3063451 GCTCTGCTGAAAGATCGTG 59 NA Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571,FBtr0081570 2 2 2 152 3R 3001103 3003936 CAACAAGAGCTATAAGCACGG 59 3004050 3004068 TCCAGACAGTTGGGATTGG 59 NA Drosophila melanogaster 61 CG31248 FBgn0051248 FBtr0081564 1 1 1 100 3R 2956077 2956150 AAATTCAGTATGCACCACCA 57 2956211 2956231 CATAAAGTCCATTAGACGCCT 58 NA Drosophila melanogaster 61 alphaTub84B FBgn0003884 FBtr0081639 3 1 1 87 3R 2912398 2912419 CGTAGCTCTACACAATTCTGTG 59 2912465 2912974 GGATAGAGATACATTCACGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1347 FBgn0037363 FBtr0078716 1 1 1 84 3R 1502275 1503001 ATGAGAAGCTCTGCCTACG 59 1503049 1503067 CGATAGATCGGTGACTGGA 58 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 3 2 2 81 3R 1489639 1489722 GAGTGTGAATACGATGATGCA 58 1489763 1489783 TGTCGGCAGTTAAACTTTCAG 59 NA Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730,FBtr0078731 2 2 2 89 3R 1483647 1483873 GCCGTACAAAGATTGAGCG 59 1483576 1483594 TATGAGCGTACAACTGGGC 59 NA Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0113194 3 1 2 139 3R 1448404 1449509 CTCACCTTATAAGATGCCCG 58 1448284 1448302 GATTTGGGTCATCGAGCTG 58 NA InUTR Drosophila melanogaster 61 Pcmt FBgn0086768 FBtr0078758 3 1 1 80 3R 1378762 1379006 AGTACATGCAACAGTACGAC 58 1378701 1378720 TGAGAGGGACGTACATTACG 59 NA Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 2 2 2 85 3R 1375372 1375390 ACTCCGGAAACATAATGGC 57 1374901 1375326 GTTGTAAACACCAATGACTCTG 58 NA Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 2 2 2 82 3R 1369007 1369096 CAGATACGGGCTTTATTGGA 57 1368944 1368964 CGTACCTAGGAATCCTTTCAC 58 NA Drosophila melanogaster 61 CG14658 FBgn0037283 FBtr0078874 1 1 1 61 3R 655852 655870 ACAGATAACGGCCTTCGAG 59 655809 655827 CCAATAGCTTGCGGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rpk FBgn0022981 FBtr0078859 3 1 1 113 3R 473030 473123 GCAGGGATTTAAGGTACTGC 58 473199 473217 ATCATGTTGGGCTTCACTG 58 NA Drosophila melanogaster 61 vps24 FBgn0037231 FBtr0078958 1 1 1 101 3R 136205 136223 ATTGTGAATGCGCGAAAGG 59 136067 136140 TACACGCAAGGTGGATAGC 59 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 2 2 2 103 3R 67637 67714 TACATCCATATACGAGGCGC 59 67553 67571 CTTGCTCAATCCGAAGCAG 59 NA Drosophila melanogaster 61 snmRNA:641 FBgn0065088 FBtr0091663 3 1 1 62 3L 17661784 17661802 AATATAGAATCGGCCGACG 57 17661740 17661758 ATTGGGTGTCCAATTGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41454 FBgn0084017 FBtr0111173 2 1 1 160 3L 23131360 23132879 CAACATTCGTTGACTTTCCTC 57 23133001 23133019 AACGAAACGGGAGAAACAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 3 1 2 80 3L 22859043 22860503 GGATCAAACCAAGAACAAATCG 58 22860541 22860562 CAGTCGTCTAGTATCTTCTTGG 57 NA Drosophila melanogaster 61 CG32454 FBgn0260481 FBtr0078529 1 1 1 60 3L 22722989 22723008 TAGGAGTGATGTGCTTCTGG 59 22723031 22723049 GATCCTCTTGGTAAGCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14567 FBgn0037126 FBtr0078454 2 1 1 60 3L 21731258 21731279 CATAGCTACGAGATTTGGAGAG 58 21731219 21731239 CGGTAGATTGACTAGAGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14569 FBgn0037123 FBtr0078456 2 1 1 65 3L 21724497 21724515 CTATACCCAGTCCTTCGCC 59 21724450 21724468 AATCGAAGGGAACACTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 2 3 3 82 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612187 21612210 CTGGATGAATCCATCTTTGTACTC 59 NA Drosophila melanogaster 61 VhaM9.7-2 FBgn0028663 FBtr0078369 2 1 1 156 3L 21533136 21533154 TTCATTGGCATCATCTGCC 58 21533411 21533430 CGTTCATGCTTAGTTTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7529 FBgn0037090 FBtr0078354 3 1 1 80 3L 21496150 21496169 GCTATCGCAGACAGATTCCT 59 21496211 21496287 GCGCATCATAATAGCTTGCT 59 NA Drosophila melanogaster 61 Cpr78Cb FBgn0037068 FBtr0078337 1 1 1 213 3L 21288616 21288635 TGTGTATAGCTGACAGTGCA 59 21288894 21288912 AACACTCCTTCGTCATCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10566 FBgn0037050 FBtr0078292 1 1 1 80 3L 21125780 21125861 TCTTTGCTAACGAGTACCAGG 59 21125903 21125921 GAGGTGCACTTGGTTTGTC 59 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288 3 1 2 60 3L 21025017 21025094 AGGAGATTCCCGTATTCCT 57 21025115 21025136 GGGTATTGAAAGAGATACAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5104 FBgn0037009 FBtr0078209 1 1 1 144 3L 20514554 20514572 AAGGGATTCGTCATCTGCT 58 20514680 20514773 TGAGAAAGCAGGTACTGGC 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 2 4 4 81 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508474 20508552 CAACCATAGCCCGAATCCA 59 NA Drosophila melanogaster 61 mRpL15 FBgn0036990 FBtr0078227 3 1 1 126 3L 20429005 20429094 AAACAGAATGACAAGCGCG 59 20428897 20428915 AGTAGAAGGGCTGATTGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 2 2 2 82 3L 20385586 20385755 AGTCCATGTTGAAAGTGGC 58 20385522 20385543 CCTGGTCATCTTTCAATTTCAG 57 NA Drosophila melanogaster 61 CG17147 FBgn0260393 FBtr0074824 3 1 1 89 3L 20216991 20217399 GACTCCTAACCTCAAACTTGG 58 20217450 20217468 TCCTCGTATTCACCGACAC 59 NA Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 1 2 2 92 3L 20181854 20182104 CTGAAGCTGATCATCAATCTGG 59 20182157 20182175 GTTTAAGTTCCACGTGCCG 59 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 2 2 2 80 3L 19650463 19656389 TTCCATCGAGAGTAATCCCT 57 19650402 19650422 CGACTAGTGACATATTGTGCA 58 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074943 3 1 3 253 3L 19594871 19594889 AGATGCATGCCAGATTTGC 59 19595171 19595189 ATGTACTGAACCACACTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990,FBtr0074989 1 2 2 123 3L 19254669 19254687 GCCAAGAAGCGTATATCCC 58 19254879 19254897 TGAAGGGTGCTGGTTTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 2 3 3 85 3L 19252661 19253225 CATTCTGGCAGGTTATCCG 58 19252594 19252614 CAAAGAACATGTGATGCACTG 58 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075028 3 1 4 142 3L 19153781 19163567 CAGTGACAATCAATCCTGGG 58 19139513 19139531 GTTTCCTTCCAGACACAGC 58 NA InUTR Drosophila melanogaster 61 RpL26 FBgn0036825 FBtr0075066 3 1 1 208 3L 18892177 18892195 TCTTTGCCATCCCTAACCG 59 18892533 18892551 CACATTGTACTTCTGGCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 3 1 1 117 3L 18600087 18600167 ATGCTGGAGAAGTCTCACAG 59 18600247 18600265 TCTGGCGTTGAATCATCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Ir75a FBgn0036757 FBtr0273392 2 1 1 80 3L 17810616 17810691 TTATTGGAGGAGGCTAGTCG 58 17810555 17810575 CTCCAATTTAGACTGGTTGCC 59 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 1 2 2 81 3L 17548081 17548099 GTCGTCTTCCTCCAGTCAC 59 17547962 17548037 CTGCTTTGACTTGTGATCCG 59 NA Drosophila melanogaster 61 CG13733 FBgn0036729 FBtr0075225 3 1 1 60 3L 17471798 17471817 CCAACATCGTAAGTATCGGC 58 17471757 17471775 GATCTCCTGTTCCATACGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 2 2 2 88 3L 17037746 17037822 GATTACTTTGATCGGAGATGTACG 59 17037681 17037702 GCTTGACTATGAACTTGTTGCA 59 NA Drosophila melanogaster 61 CG7728 FBgn0036686 FBtr0075274 3 1 1 141 3L 17011512 17011590 GAGTATCAGGGTGATGCCA 58 17011695 17011713 TTTCTGCGTCACTCATGTC 58 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 3 4 4 92 3L 17008152 17008170 AAAGCCGAACTGGATACCT 58 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 CG13022 FBgn0036679 FBtr0273313 1 1 1 60 3L 16932007 16932027 ATTGCTTCGCTGATAGTTTCC 59 16931967 16931988 GTCCATTGAACTGCATATACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33158 FBgn0053158 FBtr0075390 1 1 1 80 3L 16415067 16415148 AATTCTTCAAGGAACTGGCA 57 16415189 16415209 CTTTAATCGAAGCTAGCAGTG 57 NA Drosophila melanogaster 61 Aats-tyr FBgn0027080 FBtr0075410 1 1 1 187 3L 16411636 16411716 ATGAATCCCATGGTTCCCG 59 16411467 16411485 TTGAACAGCGAGAACAGGA 59 NA Drosophila melanogaster 61 CG4982 FBgn0036598 FBtr0075469 2 1 1 97 3L 16294578 16294661 GCGAAGATGTTCAAAGTTGTG 58 16294720 16294738 TATTCCACGTGCTCATAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13065 FBgn0036590 FBtr0075468 1 1 1 155 3L 16270560 16270578 CGAGTTCAACTTGCAACCA 59 16270766 16270784 GTGTCCATAGGAGATGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 2 2 2 210 3L 16134610 16134628 TAGTGGTTGCTACAAGGGC 59 16134356 16134436 CTCCGATTGCTGATAGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12713 FBgn0036536 FBtr0075506 3 1 1 157 3L 15825879 15825965 TCTCAAAGCCTACGAGGAG 58 15826085 15826104 TAAGAAGCTGTGAGATGTGC 58 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565,FBtr0075566 1 2 2 80 3L 15577958 15578030 CTGGAAGAACTGCGAACAC 59 15578073 15578092 CGAATGATGTTCACCTCTCC 58 NA Drosophila melanogaster 61 CG6878 FBgn0036488 FBtr0075643 3 1 1 95 3L 15155150 15155169 CGATAAGATGAAGACGGGCT 59 15155227 15155368 CGTAGTCCGTATCTGAGCG 59 NA Drosophila melanogaster 61 CG6878 FBgn0036488 FBtr0075643 2 1 1 81 3L 15155166 15155185 GGCTTCATCATCGGATTCTG 58 15155229 15155370 CGCGTAGTCCGTATCTGAG 59 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075635 2 1 3 122 3L 15101948 15101967 TTATTCACGACATCGAGGAG 57 15102052 15102449 TGAGAACGATCTTTGGCAG 57 NA Drosophila melanogaster 61 Reck FBgn0036463 FBtr0075671 3 1 1 87 3L 15004352 15004370 ATGCGGATACTAGTGAGGC 59 15001081 15004307 GTGAAGATATCATATGATTCTCCGG 59 NA Drosophila melanogaster 61 mRpL39 FBgn0036462 FBtr0075672 1 1 1 99 3L 14992132 14992150 TGTTCCCTGGGATATGCAC 59 14991987 14992070 CCAGAATGCTTTGTTGACCA 59 NA Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 1 2 2 83 3L 14989528 14989605 AGAAGATATGGTACGCTTGGA 58 14989650 14989668 GAACCAGAAGAATGCCCAG 58 NA Drosophila melanogaster 61 CG5048 FBgn0036437 FBtr0075684 1 1 1 85 3L 14678055 14678073 TCCCAATCAGAGAAGAGGC 58 14678119 14678192 TTCCAGGGTTCATCTTATTGAC 58 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 1 3 3 80 3L 14620524 14620543 TTGCTATGTGACCTTTGGAG 57 14620586 14620664 CATGGAGTCAAATCACCGA 57 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 2 2 2 85 3L 14583157 14583175 CAAACCAAGTATCTGGCCG 58 14577187 14583109 TGGAACCAGACCTTAACCTG 59 NA Drosophila melanogaster 61 Sox21b FBgn0042630 FBtr0075747 1 1 1 132 3L 14109453 14111555 GTTAAGAGCGGGCATAACG 59 14106676 14106694 CTTGTCCATCTGACCGGAG 59 NA Drosophila melanogaster 61 CG14110 FBgn0036352 FBtr0075844 3 1 1 104 3L 13377967 13378037 GAGTGCAGTTGTTCTCACC 58 13378104 13378123 TCTTTACGGGAACGAGACTC 59 NA Drosophila melanogaster 61 Acp70A FBgn0003034 FBtr0075836 2 1 1 113 3L 13294750 13294769 GCTCTATTCTTGGTTCTCGT 57 13294844 13294928 CCACTTATCACGAGGATTGG 58 NA Drosophila melanogaster 61 snky FBgn0086916 FBtr0075827 3 1 1 98 3L 13169014 13169038 CCACTTAGTCGTAGAATTACTTCAG 59 13169091 13169184 ACACCACTGATATTGAATCGGA 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 2 2 2 144 3L 12776651 12776671 GAAATAGAAGGTACCGTAGCA 57 12776777 12776849 TTTCCTCAGGCAAATTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 toe FBgn0036285 FBtr0075980 3 1 1 112 3L 12416724 12416811 TCGGATGATAGATATCGAAGGC 59 12416633 12416651 CCTTCTCCAGCTCATCCAG 59 NA Drosophila melanogaster 61 CG4328 FBgn0036274 FBtr0301071 1 1 1 81 3L 12284914 12284990 GGGATACGATTTCTATGGCGA 59 12284853 12284871 TAGAATGGTTCTCGGTCGC 59 NA Drosophila melanogaster 61 CG6938 FBgn0036235 FBtr0290131 3 1 1 80 3L 11980500 11980576 ACCATCTTGGGATGAGGAG 58 11980619 11980638 ATCTTCTTAGTCAAGCGCTG 58 NA Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0302135 1 1 2 101 3L 11816657 11816767 GAGAGCCTTGTTGAAGCAC 59 11816832 11816850 ATGAAGTCGACGTTGTTGG 58 NA InUTR Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 2 2 2 140 3L 11688021 11688039 GCCACTTAGTCCTGGAGAG 59 11687835 11687920 TACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 CG6071 FBgn0036186 FBtr0076136 2 1 1 80 3L 11638596 11638616 ACATAACATTAGTGCACGACC 58 11638468 11638557 CGATCTCCTTGTATGGTTTCTC 58 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 3 4 4 100 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600359 11600377 GCATTGTAGTGTGATCCGC 59 NA Drosophila melanogaster 61 CG33270 FBgn0053270 FBtr0076149 2 1 1 176 3L 11571586 11571605 GCTTCATCTGCTAGTACCAC 58 11571429 11571447 TCTCTTTGGGTTCTTGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11726 FBgn0036156 FBtr0076172 3 1 1 60 3L 11388198 11388217 ATCCGTTCTCTAACCATTCC 57 11388239 11388258 TTTCCACATACGCAAATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Alg10 FBgn0052076 FBtr0076217 2 1 1 81 3L 11158265 11158284 TGTAATCGACGAGGAGTTCC 59 11158326 11158403 TGTTATCTTGGGATCCCACAC 59 NA Drosophila melanogaster 61 SuUR FBgn0025355 FBtr0076203 2 1 1 80 3L 11059303 11059321 GGAGGTATTCAGTAAGCGC 58 11059363 11059469 CGAAAGTCCTTGATGTACTCG 58 NA Drosophila melanogaster 61 CG32068 FBgn0052068 FBtr0113421 1 1 1 81 3L 10656762 10656782 GAGTACCAGAGCGATAATACC 57 10656825 10656905 TTTCCGAGCATGTGATCTC 57 NA Drosophila melanogaster 61 CG14153 FBgn0036094 FBtr0076259 3 1 1 60 3L 10636689 10636773 GGCTATGTGCACTTATGCC 59 10636797 10636815 GATGCATACTGAGCTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 1 2 2 80 3L 9858430 9858449 AAGTTCACTCACCACAACTC 58 9858492 9859425 GCGAGATGAGTCATAGCTG 57 NA Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 3 3 3 123 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624406 ATAGTATCGATTCGCCTTGC 58 NA Drosophila melanogaster 61 CG3448 FBgn0035996 FBtr0076476 1 1 1 60 3L 9444533 9444551 CCGAAGCAAATGGATGGAC 59 9444491 9444511 TTGATTGTCAGAAGTGGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33926 FBgn0053926 FBtr0091930 2 1 1 81 3L 9436449 9438807 AATATTAGGGCCATAGAGGACG 59 9438849 9438867 TCTCGCTGTCAGTGATCTC 58 NA Drosophila melanogaster 61 Hsp67Bc FBgn0001229 FBtr0076497 2 1 1 60 3L 9364987 9365006 GCCATTGTTTCCACTTTGTC 58 9364946 9364965 AAACTAATGGTGGAACCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32039 FBgn0052039 FBtr0076441 2 1 1 81 3L 9352445 9352463 CAAAGAGCGGAGGAAATGC 59 9352505 9352585 TAGTTTGCCACCTAAGATTGGA 59 NA Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 2 1 1 68 3L 9347871 9347950 ATTATGGTTGCTCAGGCGA 59 9347979 9348000 GATTAAAGATGTTCCACCTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Cp18 FBgn0000357 FBtr0076571 3 1 1 160 3L 8719941 8720133 AAGTTCATGTGCATCTGCC 58 8720257 8720275 TATCCACCACCGTATGAGG 58 NA Nonspecific Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 2 2 2 137 3L 8642731 8642817 GCTACAAGCCAACTGTACG 59 8642918 8642936 GAACAATCCATCGGACCAC 58 NA Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 1 2 2 80 3L 8301245 8301263 GTTAGCGTCATCAACACCA 58 8301056 8301201 AAGTTGAGTCACTTGCACG 58 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 2 3 3 80 3L 8262216 8262820 GATTTCCGATACCAGACAGC 58 8262863 8262881 TATTCACGTGGCTGATGAC 57 NA Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 1 2 2 80 3L 7138620 7138700 GGAAATGGAGACGATTCCG 58 7138558 7138578 CAACACATTGTCCATCATCAG 57 NA Drosophila melanogaster 61 CG14820 FBgn0035718 FBtr0076894 3 1 1 80 3L 6926768 6926987 TTATTCCCATGAAGTGGAACG 58 6927028 6927047 AGATCAGTTCCAATGCACTC 58 NA Drosophila melanogaster 61 BG642312 FBgn0047334 FBtr0091954 3 1 1 81 3L 6225865 6225947 AGTTATCTGCGTGATCGGT 58 6225802 6225822 TTGTCGATATCGATCCTCGAG 59 NA Drosophila melanogaster 61 CG13298 FBgn0035692 FBtr0077015 1 1 1 103 3L 6185991 6186079 AACAAGCGCAACCATATCC 58 6185906 6185926 CCGAATATGTCGTACATCTCG 58 NA Drosophila melanogaster 61 CG4603 FBgn0035593 FBtr0077164 1 1 1 60 3L 5127934 5127953 CATACTGCTGAAGAAGGTGG 58 5127974 5127994 GAATCGTATGCTGGTGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13708 FBgn0035577 FBtr0073358 2 1 1 125 3L 4832350 4832368 AGCACAACCTGATCAACAC 58 4832166 4832262 CGTTGCTATATTCACCCAGC 59 NA Drosophila melanogaster 61 CG32236 FBgn0046793 FBtr0073369 2 1 1 60 3L 4666270 4666294 TATTATCATACCCATGGGACTATCG 59 4666234 4666254 ATGGTATAGCTGAGAAGTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 3 2 2 62 3L 4405803 4405824 CGATGTGGTCGAAATTAAGACC 59 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32251 FBgn0052251 FBtr0073286 1 1 1 80 3L 4316065 4316083 TGGATGACCTGCTAAACCG 59 4316124 4316203 TGGTTAGGATGTTGACAGTCTC 59 NA Drosophila melanogaster 61 CG1265 FBgn0035517 FBtr0073228 3 1 1 81 3L 4255723 4255813 AAACATGACTCGAATCTACACG 59 4255854 4255873 AAGGAACGTCGAAATCAGGA 60 NA Drosophila melanogaster 61 mas FBgn0011653 FBtr0073260 2 1 1 80 3L 4162761 4162781 TCAATATCTATGTGGAGCTGC 57 4162643 4162720 GAACGAACAATGTTGGTCAC 58 NA Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 1 2 2 80 3L 4035082 4035168 ATCCTAAAGAGTATGCAGGCC 59 4035210 4035228 GCGACCAAGTAGGTAGACC 59 NA Nonspecific Drosophila melanogaster 61 CG14980 FBgn0035470 FBtr0073180 2 1 1 118 3L 3898089 3898110 GGAAGATCATCCAATGAAGGTC 59 3897929 3898010 CAACCTGGTCAGCATTCAG 58 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073063 1 1 2 83 3L 3319832 3319850 GATATCTGCAATCGCCGTG 59 3319897 3320524 ATGGGATTGCCTTCATCGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32270 FBgn0052270 FBtr0100421 1 1 1 60 3L 3208201 3208220 ATACTCCGATGTGAGCTACC 58 3208160 3208184 CTAGCAGTACCTGTGAATATTATCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33159 FBgn0053159 FBtr0073104 1 1 1 60 3L 3204321 3204339 TTCCGTACCTGGTTTACCT 57 3204279 3204299 GAGATTAAGGATCCTCCACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp83 FBgn0001233 FBtr0073040 3 1 1 85 3L 3193360 3194512 CATACAAGATGCCAGAAGAAGC 59 3194554 3194576 GTAGAATGTGTTGATGATCAGGG 59 NA InUTR Drosophila melanogaster 61 CG32846 FBgn0052846 FBtr0073009 2 1 1 86 3L 2951312 2951333 GCCTGTGGAAATATCTTATCGA 58 2951184 2951265 CATACCAGAAGCATTGGGA 57 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072922 3 1 3 174 3L 2488882 2490993 CCAGACATTAGTGATGTGATGTC 59 2491127 2491145 ACGTATTCCGTGTAGTCCG 59 NA InUTR Drosophila melanogaster 61 CG13800 FBgn0035338 FBtr0072891 3 1 1 81 3L 2388772 2402566 TCTCATACAGACTGTTCAAACC 58 2402608 2402626 GCTATTCCGGTCATTGGTC 58 NA Drosophila melanogaster 61 CG8993 FBgn0035334 FBtr0072889 1 1 1 69 3L 2372443 2372461 GATTGTGGACTTCTTCGCA 58 2372556 2372574 CACAATACTCTCGATGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5687 FBgn0035293 FBtr0072858 1 1 1 80 3L 1935660 1935678 TGAGTATCTGGGCATTCGG 59 1935536 1935620 GTGTAGAAGCACATCTGAATGAC 59 NA Drosophila melanogaster 61 CG13924 FBgn0035286 FBtr0300120 2 1 1 60 3L 1870695 1870713 TCTGATTGCGAAGAGGAGG 59 1870737 1870755 AGGCATCCCTTAGCTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13928 FBgn0035246 FBtr0072822 1 1 1 60 3L 1627694 1627713 GGTCAATAAGGTGTGCAACG 59 1627653 1627673 GAAGTACTGCTGGTACATACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 3 2 2 143 3L 1307713 1307732 TAGAGATCCCTTTGCAGGAC 58 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 CG9192 FBgn0035193 FBtr0072734 2 1 1 60 3L 1237877 1237895 GAGGCTATAACGGAAACCC 57 1237835 1237853 CCTATGATTCCGGTGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072642 1 1 2 93 3L 1099101 1099120 TGATCCGAGAGGAAGAAAGG 58 1040208 1040299 TACTGGTAGCTGTCTGCTG 58 NA Nonspecific Drosophila melanogaster 61 RabX6 FBgn0035155 FBtr0072577 1 1 1 91 3L 690717 690735 TCATCACGGATACGGACAG 59 690790 690957 GAGTTGGAGCTTGATCTGC 58 NA Drosophila melanogaster 61 CG3371 FBgn0035153 FBtr0072610 2 1 1 60 3L 684156 684174 AGTTCAGACGCACCTACAG 59 684114 684135 GTGTAGCCTATCTTCAACAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12030 FBgn0035147 FBtr0072556 3 1 1 255 3L 650511 650589 CAAGTCTGACAAGCGTTGG 59 650808 650826 CTTGTCCAACGCCTTTACG 59 NA DesignRelaxed Drosophila melanogaster 61 miple2 FBgn0029002 FBtr0072506 2 1 1 90 3L 274227 274598 AGAAGTGCAAGAAAGGCTG 58 274649 274670 TCTGGTTCCAACTTATCCTCTC 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0100224 1 4 6 107 3L 217439 217505 TTTGTTTCAGGTCTTGCCC 58 217576 217594 TATCGTAGGTTCAGTGGGT 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Yu FBgn0061188 FBtr0302365 1 1 1 62 2R 20385999 20386017 AAGAATCCACAAGGTCCCG 59 20386043 20386061 AATCGAGATGGCAATGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34038 FBgn0054038 FBtr0299878 3 1 1 140 2R 21056594 21056615 CGTCTTAATTTACTAAGCCACG 57 21056714 21056797 TATAACTGAAAGGAAACCGGC 58 NA Drosophila melanogaster 61 Eap FBgn0035063 FBtr0072374 3 1 1 60 2R 20668784 20668802 AGTTCACTGCTTCGAGGAG 59 20668826 20668844 TCAGGTTCGTCACGTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130,FBtr0072372 1 2 2 61 2R 20651088 20651106 TCTTCTTGGTGGAGATCGA 57 20651131 20651149 GAGACCAAGACGCATATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spz6 FBgn0035056 FBtr0072370 2 1 1 86 2R 20646312 20646393 TATCCCTTCGAACTTATTCGCA 59 20646440 20646458 CTTGGGTAGGGTATCGTCG 59 NA Drosophila melanogaster 61 Ir60b FBgn0259185 FBtr0299669 1 1 1 60 2R 20403567 20403585 CGCCCACCATACTATTCGT 59 20403607 20403627 AGACACTCCAGAAAGACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3121 FBgn0034957 FBtr0072161 3 1 1 80 2R 19905273 19905293 CATTGGCTATGAGTTGAACGT 59 19905333 19905435 AGATGATCGAACAAGTTGTCC 58 NA Drosophila melanogaster 61 CG30178 FBgn0050178 FBtr0072159 2 1 1 61 2R 19874308 19874326 TAAGACGTACCATCCGCAC 59 19874350 19874369 GTTTAGGATCAACCACCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072101,FBtr0072100 1 2 2 111 2R 19572890 19573001 AAGATGTCCGTAGTGCCAC 59 19572797 19572815 CATCCCTCTTCAGTCCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42241 FBgn0250870 FBtr0290304 2 1 1 60 2R 19560819 19560837 TTTGTGGGACGGAATTCGA 59 19560861 19560879 CATTCGCCTCGTATTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 2 2 8 80 2R 18624163 18624181 CTCTGGGTAGAGATCCAGG 58 18621693 18624119 GTCATGAACCTGCATTCCC 58 NA Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 3 2 2 121 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357182 18357200 TTGATGGTAGGGCTATGCG 59 NA Drosophila melanogaster 61 CG3264 FBgn0034712 FBtr0071781 3 1 1 85 2R 18097125 18097143 CTCTCCGAACTCACTGAGG 59 18097000 18097079 ATTAGACCACCTTCAATGAACG 58 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0113103 1 1 2 81 2R 17974820 17975969 TTGGATACAACCAGATTCTTCC 58 17974760 17974779 ACAGCAAGAATGGTGTTCAG 58 NA Drosophila melanogaster 61 CG11475 FBgn0034687 FBtr0071803 1 1 1 60 2R 17957825 17957845 CGAGTACATCATAGAATCGGG 57 17957785 17957804 CGGTATAGCCTTCACATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34369 FBgn0085398 FBtr0112594 3 1 1 95 2R 17855420 17855515 GTACATACTCGCCCATCCC 59 17855574 17855592 TTGTCGTAAGTGAGGCTGG 59 NA Drosophila melanogaster 61 CG34369 FBgn0085398 FBtr0112594 2 1 1 83 2R 17855354 17855372 GAACACCAGCTTTCCATCG 59 17855418 17855514 GGATGGGCGAGTATGTACTC 59 NA Drosophila melanogaster 61 CG13494 FBgn0034671 FBtr0071733 3 1 1 80 2R 17842218 17842236 AACATCCTCATGGAGCACC 59 17842156 17842175 ATAATACCGACAGCCATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13488 FBgn0034670 FBtr0071723 3 1 1 88 2R 17839263 17839354 CATGTGTAGCTTGCTGACC 58 17839405 17839424 GCAGAGCGTAATCTGATTGC 59 NA InUTR Drosophila melanogaster 61 CG9294 FBgn0034666 FBtr0071720 1 1 1 80 2R 17749072 17749146 CGATACCTTAAGGGAAGTGG 57 17749189 17749207 ATTTGTCCAGGCCTATACG 57 NA Drosophila melanogaster 61 CG33226 FBgn0069056 FBtr0300930 2 1 1 80 2R 17426160 17426225 AAGCATAGAAATCATGCACCG 59 17426100 17426121 GGCAACATAGTTCAGAAATTGC 58 NA Drosophila melanogaster 61 Acox57D-p FBgn0034628 FBtr0071606 3 1 1 82 2R 17275395 17275476 CCAATTAATCCCAACGAACGA 59 17275520 17275538 CTTGTGGCAATCTCTGGGA 59 NA Drosophila melanogaster 61 CG30391 FBgn0050391 FBtr0071621 3 1 1 60 2R 17153568 17153588 TATCGGAGTTACTTTGACAGC 57 17153528 17153546 TTTCTGCCGCTATCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0071527,FBtr0301900,FBtr0301894,FBtr0301898,FBtr0301895,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0301901,FBtr0301896,FBtr0071528 1 15 15 123 2R 16911516 16911534 CATTTACTTGGAAGGCGCT 58 16911621 16911696 AAGAATGATGGCTGGTTCC 57 NA Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 2 2 2 83 2R 16518245 16518263 AACGATCGCATTATGGAGC 58 16517762 16518201 ATAGACGATCAGCAATAGAACC 57 NA Drosophila melanogaster 61 Obp57d FBgn0043536 FBtr0299804 1 1 1 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13427 FBgn0034514 FBtr0086268 2 1 1 79 2R 16426668 16426686 CTTGTGCCAGCTGATATGC 59 16426607 16426625 TTAGAGACTTGGTCTGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13426 FBgn0034510 FBtr0086295 2 1 1 113 2R 16400503 16400576 ATGTGCCAAGAGGAGTGTC 59 16400408 16400426 AAATCCTTGGACGGAACCA 59 NA Drosophila melanogaster 61 CG11041 FBgn0034481 FBtr0300692 1 1 1 92 2R 16034136 16034154 GAAATGGACGAAATGTGGC 57 16034208 16034289 TTACAGATAGACCATGAGCTG 57 NA Drosophila melanogaster 61 Spt5 FBgn0040273 FBtr0086531 2 1 1 81 2R 15326672 15326694 GTACATCTTAAGTTGCTTCCTCG 59 15326735 15326815 TATCGTCACTCTCCGTTGC 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086508,FBtr0086506,FBtr0086509 3 4 4 81 2R 15130613 15130636 GAACAGAAGATAACCATTCAGTCC 59 15130676 15130769 CCGTCGCTTCTTGTATTGC 59 NA Drosophila melanogaster 61 CG15116 FBgn0034415 FBtr0086596 3 1 1 85 2R 14943260 14943279 ATACGTTTGGGAATCCAGTG 58 14943141 14943212 AGTAAGTCCGCATTTGGAG 57 NA Drosophila melanogaster 61 GstE3 FBgn0063497 FBtr0086671 1 1 1 60 2R 14288428 14288446 CCGCTCTGGATGATAATGG 57 14288468 14288488 ACCAGGTAGGAGTTAATAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstE2 FBgn0063498 FBtr0086670 3 1 1 60 2R 14287108 14287129 ACTTGGACTACGAATACAAGGA 59 14287147 14287168 AACGCATCCTTAAAGTGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14505 FBgn0034327 FBtr0110803 2 1 1 81 2R 14191142 14191161 GTATGGCGAGAAATATGGCT 57 14191003 14191101 GCAATCAAGTCATTTACCTCAG 57 NA InUTR Drosophila melanogaster 61 CG14505 FBgn0034327 FBtr0110803 1 1 1 80 2R 14191142 14191161 GTATGGCGAGAAATATGGCT 57 14191004 14191102 CAATCAAGTCATTTACCTCAGG 57 NA InUTR Drosophila melanogaster 61 MED9 FBgn0260401 FBtr0300664 1 1 1 94 2R 14055008 14055026 ATCTACGACATTGTGCGCT 59 14055216 14055288 AGTTCAAAGATCTTGTGGTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 2 1 1 64 2R 13936050 13936124 TGGCTAAGTTACAGTTGGC 57 13936152 13936170 GATTAAAGCCTGCTCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086797,FBtr0086795 3 2 5 148 2R 13738942 13738960 CCTTCCTCACAGAACCAGG 59 13745253 13745271 TTGCTGGATGCCTTTAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5002 FBgn0034275 FBtr0089546 1 1 1 80 2R 13640138 13640221 AAACTGGAGAAGATCAATGGTC 58 13640262 13640280 GAGATACTCAGCCGATGCA 59 NA Drosophila melanogaster 61 sub FBgn0003545 FBtr0086881 2 1 1 117 2R 13635029 13635050 AGCGAGACATCTATGATACCTG 59 13634872 13634951 ACATCATCGCCCAGTAAGG 59 NA Drosophila melanogaster 61 Ir54a FBgn0034272 FBtr0086865 3 1 1 60 2R 13632564 13632585 TGAATCTCCTTCGAAACATGAC 58 13632604 13632624 TCATTTAGCACAAAGTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14483 FBgn0034248 FBtr0086902 3 1 1 134 2R 13473412 13473430 GAAGCGGGAACTTTATCCG 58 13473296 13473315 TACTTCTTCTGCTTGCCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087054 1 1 2 100 2R 12845689 12845775 GATGGAGGCATCCAAACAG 58 12845837 12845857 CAGGATCTAGTAGGGAATGCA 58 NA Drosophila melanogaster 61 Arp53D FBgn0011743 FBtr0087023 2 1 1 60 2R 12661942 12661960 TAGTAATTCACACCACGCC 57 12661984 12662002 TCCAGCCTTACATACTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 1 3 3 101 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471726 12471744 ATCCGAAAGATCCTGCTCC 59 NA Drosophila melanogaster 61 CG15712 FBgn0034131 FBtr0087127 2 1 1 122 2R 12372603 12372626 GACCAGAATCTATTCCTTGATAGC 59 12372449 12372522 TCTCTGGAAAGTCTGGCAC 59 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 3 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147,FBtr0087149,FBtr0087148,FBtr0087145,FBtr0087146 3 5 5 60 2R 12227690 12227709 CAGAAGGATACTTCCAAGCA 57 12227731 12227750 TGTGGAATAGGATAGCATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10731 FBgn0034081 FBtr0100497 2 1 1 115 2R 12036519 12036537 ATGGGCCTAACTCTGAAGC 59 12036297 12036441 TCGATAAATTGTGCAAGCCT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8401 FBgn0034069 FBtr0301196 2 1 1 80 2R 11916447 11916467 AGGATGGAACACATCAGAAGG 59 11916507 11916582 AAAGGCAATGCTGAGAATCTC 59 NA Drosophila melanogaster 61 CG30467 FBgn0050467 FBtr0087334 2 1 1 80 2R 11426958 11426978 TCTGCAACTCATTCCATTAGG 58 11427020 11427096 AAGTACTTCAGGCGACTCC 59 NA Drosophila melanogaster 61 Ir52a FBgn0034023 FBtr0273302 1 1 1 60 2R 11387652 11387673 GGACCAACCTATCTACATTGAG 58 11387692 11387712 CACCGTTCTTATAGTAGCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 1 2 3 80 2R 11269847 11269865 AGGACCAGGAGCTTATGGA 59 11269908 11270916 GGTAGCGATCATGAAACAGG 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833,FBtr0113485 3 6 6 80 2R 11166894 11167286 GCCTTTGTCCACAAATATGC 58 11166833 11166853 TATGGTCCCGATGAGATAGTC 58 NA Drosophila melanogaster 61 Fs FBgn0259878 FBtr0087398 2 1 1 86 2R 11124039 11127084 TATGAAACCAGTGCGTTTGC 59 11123972 11123991 GATGCTGATGGTGATGATGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42391 FBgn0259737 FBtr0300042 2 1 1 60 2R 11090179 11090197 TATGGAAGGCAAATCGTGG 57 11090221 11090239 TCTTGTGACGAGATTCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33469 FBgn0053469 FBtr0087504 3 1 1 60 2R 10493242 10493260 ATGATACAACACGCCTGGT 59 10493200 10493218 AATGTTTAGCAGGAGGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttv FBgn0020245 FBtr0087495 3 1 1 80 2R 10450521 10450539 ACTACGAGACCTTACTGCA 57 10450580 10450774 CTTCGAGGAATCTAAAGGAACC 58 NA Drosophila melanogaster 61 CG34236 FBgn0085265 FBtr0301011 1 1 1 80 2R 9492693 9492787 AACTGCTGGCTGAAATTCC 58 9492631 9492650 TTTCCGTGTGAATGTTCGAG 58 NA Drosophila melanogaster 61 CG17047 FBgn0033827 FBtr0087753 1 1 1 80 2R 9188253 9188272 GACCAGCAACTATATGCCTG 58 9188313 9188613 AAGGAGTATTCGATCATGCTG 58 NA Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 1 2 2 80 2R 9037179 9037266 AGTTCGCAGAATTACAATCACG 59 9037120 9037141 GAGAGGTGTTTGTTCAATGTCC 59 NA Drosophila melanogaster 61 CG8646 FBgn0033763 FBtr0301237 2 1 1 88 2R 8544889 8544974 ATGATTTGGGCTTCAACGA 57 8545025 8545044 AATAATGCCAGAATAGGCCA 57 NA Drosophila melanogaster 61 Amph FBgn0027356 FBtr0087828 3 1 1 81 2R 8495154 8495172 TTTCTGGTCACCAACTTGC 58 8495214 8495436 CCAGTTCCGAGTAAATCTTAGC 59 NA Drosophila melanogaster 61 CG33632 FBgn0053632 FBtr0091609 2 1 1 81 2R 8410020 8410093 CCTTATAACCATGATCTTGTGC 57 8410134 8410153 CCGGAAAGGGTAGTATTTCG 58 NA Drosophila melanogaster 61 CG8550 FBgn0033742 FBtr0087935 2 1 1 60 2R 8360477 8360498 CCTATGTAAGAGCAAAGTTGGA 58 8360517 8360537 TTCTCCTCAGGCAAATTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0100374 3 1 2 135 2R 8283474 8283545 CATATCGTCGGTTTCGGTG 58 8283643 8283662 TATCACAGTGATTGCTTGCA 57 NA Drosophila melanogaster 61 CG33013 FBgn0053013 FBtr0290072 1 1 1 80 2R 8251798 8251889 TGATGAAGTACTACAGACAGC 57 8251931 8251949 GTATAATTCCAGCCTGCCA 57 NA Drosophila melanogaster 61 CG30049 FBgn0050049 FBtr0087906 2 1 1 80 2R 8246242 8246316 ATCGAGTTCGTGAAATCCG 58 8246358 8246378 ATCCTGGTTTACGTAATGTCC 57 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 1 2 2 88 2R 8087083 8087346 GTGTTCAGAGATGTTGAGCA 58 8087014 8087032 ACTTTCAGGACGTTGAAGC 58 NA Drosophila melanogaster 61 CG13175 FBgn0033693 FBtr0100143 2 1 1 103 2R 8070988 8071006 AAGAGCAAACAAGAACGCC 59 8071073 8071152 TAGATCCACCTCATGGCAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8964 FBgn0033674 FBtr0088027 2 1 1 130 2R 7911659 7911766 AATGGATGAGGGAAACCCAG 59 7911548 7911566 TTGACCCTGGCTATTGGAG 59 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299853 3 1 4 80 2R 7184806 7184824 CAATCCATTCCCGACTTCG 58 7182268 7182288 GTACAGCTTGTAGCCAAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12895 FBgn0033523 FBtr0088314 3 1 1 121 2R 6324753 6324833 CAATTTATAGTATCTACGGTAGGCC 58 6324656 6324676 TCATCGTAGTCCACAATTTCC 58 NA Drosophila melanogaster 61 CG34222 FBgn0250822 FBtr0112415 2 1 1 80 2R 6207869 6207962 ATCAATTAAACGGGATGCGTC 59 6207809 6207829 ATTTCTGTCTAAGTCCTCCGG 59 NA InUTR Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 3 2 2 85 2R 6206429 6206447 GATACGAACTGAGCGAGGA 59 6206496 6206577 ATCGCAGGGAATCAGATCG 59 NA Drosophila melanogaster 61 CG12914 FBgn0033499 FBtr0088334 3 1 1 108 2R 6136356 6136458 CGAGCGTGTTTGTCATAGTC 59 6136527 6136547 AAGTTGAGGTAGTACAGCTGG 59 NA Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 2 2 2 80 2R 5471132 5471151 GCTAAAGAACCAACCCAGAG 58 5471016 5471091 CCAGGATCTGTAAGGATTTCC 57 NA Drosophila melanogaster 61 CG2063 FBgn0033400 FBtr0088600 3 1 1 189 2R 5173843 5173927 CGTCCCTGGTAATCATACC 57 5173672 5173690 TCCTCTTCACTAGAGGACG 57 NA Drosophila melanogaster 61 CG34219 FBgn0085248 FBtr0112412 3 1 1 88 2R 4806154 4806173 CAGGGTGGTATCTCCTTTGG 59 4806026 4806103 TAAGACGAGGCTCGAAACG 59 NA Drosophila melanogaster 61 Jon44E FBgn0001285 FBtr0088704 1 1 1 63 2R 4579426 4579444 TCGCTACAACAGCTACTCC 59 4579471 4579489 GTTGTTGTCTGTCAGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ptc FBgn0003892 FBtr0089427 1 1 1 80 2R 4550267 4550426 CTTCTCAGGGCAAATTGTATCC 59 4550462 4550485 GACTCTTGGGTATCTTAAGATCGT 59 NA Drosophila melanogaster 61 Cyp6a13 FBgn0033304 FBtr0088690 2 1 1 60 2R 4458778 4458796 GCCAGACATTGGACTACAG 57 4458820 4458838 AGTAGTTGGATCAGGTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4ad1 FBgn0033292 FBtr0088760 2 1 1 83 2R 4329275 4329293 ATGACTTCCAGGGATTCCG 59 4329157 4329231 ACAGGATGTTCTGAATTTCAGC 59 NA Drosophila melanogaster 61 Lcp3 FBgn0002534 FBtr0088743 2 1 1 63 2R 4322998 4323072 TCAAGATCCTGCTTGTCTG 57 4323099 4323117 TTGACCTCCACATTAGCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 swif FBgn0050366 FBtr0088771,FBtr0113373 1 2 2 60 2R 4251705 4251723 CTTTGTGCCATCATGTTCC 57 4251663 4251682 TTGAGATTGATCGTTTCCCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11165 FBgn0033238 FBtr0088853 1 1 1 60 2R 3837772 3837791 GAGTACGACTTGGATCAGGA 58 3837811 3837832 TTGTCATCATGTTGACGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 2 2 2 60 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720240 3720258 GAAAGTGTGCGTAGTCCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 2 3 3 116 2R 3690701 3691031 ATATTTCCGAGACTTCATCGC 58 3690605 3690623 CCATCACATTGTCCAGCAC 59 NA Drosophila melanogaster 61 CG30496 FBgn0050496 FBtr0088926 2 1 1 60 2R 3588771 3588790 ATTACAAGGCGTACAAGGAG 57 3588810 3588831 ATTAGTTCATCATCCGAAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or43a FBgn0026389 FBtr0089051 2 1 1 80 2R 3121185 3121352 CTGAATATTATAACCTCACCCACC 58 3121128 3121148 GTAGGTGAAGAGAACGTACAG 57 NA Drosophila melanogaster 61 CG12835 FBgn0033142 FBtr0089040 1 1 1 60 2R 2995162 2995180 CCCAGATAGCAAGGATCCA 58 2995204 2995222 TTCAGGTTCCTCAGATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k14710 FBgn0021847 FBtr0086000 3 1 1 80 2R 2100658 2100734 AGGACACGGAAATGATTAGC 58 2100597 2100617 CACTAACGAGATCGTATTCCT 57 NA Drosophila melanogaster 61 CG7861 FBgn0033055 FBtr0085974 2 1 1 80 2R 1931532 1931608 ATTTGGAATGAGGCTGATGC 59 1931648 1931669 CTTTAAGTGCGGAGTCTTACTC 58 NA Drosophila melanogaster 61 CG7791 FBgn0033038 FBtr0086057 2 1 1 80 2R 1647026 1647101 CCTTTCGTAACTACTTTCCTACC 58 1646968 1646986 GCATCTGAACGTTCTCTGC 59 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 3 2 2 113 2R 1394204 1394273 ATTGAGAATCCTTAGGAACGC 58 1394111 1394131 GGTGGTTCTAATTTCTGACCC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-525f FBgn0083033 FBtr0113548 1 1 1 60 2L 20419779 20419797 GGTAAAGTGGCATTCTCGG 59 20419819 20419839 GTTGATTTGGGAGTGTTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR15280 FBgn0028867 FBtr0100604 1 1 1 80 2L 14782728 14782799 ACCGAACCAGACATTATTTGC 59 14782668 14782686 TGGCAGTAACTTCCAAAGC 58 NA Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 3 1 1 65 2L 1789271 1789353 GTATATCAGACTTTGCCTTGTACTG 59 1789230 1789249 GAAATAGTCCGCAGTGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 3 3 3 80 2L 22365256 22365277 AGTTATACTCGAGATTCCTCCC 58 22365314 22365388 GAATGGGACATCCTTTAGAAGTC 59 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 2 2 3 62 2L 21312000 21312018 CTCAAACGATACGGAGTGG 58 21312043 21312116 TCGCCAATAAGAGTAATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 betaInt-nu FBgn0010395 FBtr0081461 2 1 1 92 2L 21053634 21055001 GTTGGTCAAAGGAAACACG 57 21055054 21055075 CAGGTTAGATCCATCAATACGT 57 NA Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 2 2 2 91 2L 20930077 20930153 CCTTAGAAGAGGTGCACCT 58 20930004 20930023 TACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 CG9272 FBgn0032907 FBtr0089944 3 1 1 110 2L 20927614 20927698 TAACGTGAGGGATATAGAGGA 57 20927524 20927542 CCATTTAAGAGACGCTGCT 57 NA Drosophila melanogaster 61 CG9272 FBgn0032907 FBtr0089944 1 1 1 109 2L 20927614 20927697 AACGTGAGGGATATAGAGGA 57 20927524 20927542 CCATTTAAGAGACGCTGCT 57 NA Drosophila melanogaster 61 CheB38a FBgn0067312 FBtr0081453 1 1 1 80 2L 20818340 20818362 CATAGATGGCCTTCATTTATCGG 59 20818215 20818301 GTCATCCTGAGTGAAATGCG 59 NA Drosophila melanogaster 61 CG17570 FBgn0260000 FBtr0081375 1 1 1 63 2L 20264224 20264242 AAGGACGAGGGCAATATCC 59 20264179 20264197 AGTTCGCACTGATTTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 1 2 2 138 2L 20095816 20095834 ATCTGCAGGGTAGCAAGTG 59 20095936 20096017 TTGTCCTCGTTGTAACGCT 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 2 4 4 108 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856751 18856771 ACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 CG10413 FBgn0032689 FBtr0081080 2 1 1 80 2L 18602870 18603719 CACCAATAACACGATACCCG 58 18602809 18602828 GCATTCAGCCCTGTATAGTC 58 NA Drosophila melanogaster 61 BicD FBgn0000183 FBtr0081002 1 1 1 80 2L 17463879 17464003 GCTAGAGACCTTACAGGGTG 59 17463818 17463838 ATAGACTCACGGTTCAAGTGG 59 NA Drosophila melanogaster 61 CG15136 FBgn0032625 FBtr0080954 2 1 1 147 2L 17047595 17047778 TGATGAGTTATCTACGTACACCC 59 17047470 17047488 AGGATCCAGGCTGTAAACG 59 NA Drosophila melanogaster 61 CG4650 FBgn0032549 FBtr0301695 3 1 1 114 2L 14774822 14774843 TGGCTTATCTACATACTTCGGA 58 14774616 14774692 CGAGCTACTAATTGTTCGCT 58 NA Drosophila melanogaster 61 CG15282 FBgn0028855 FBtr0080656 2 1 1 133 2L 14712677 14712695 GCAACATCGAAGCATCCTC 59 14712862 14712881 ATATCCGAATTGAGGAAGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559 3 1 2 77 2L 13933403 13933421 GTCAAGCAGATCGTGAAGG 58 13932953 13932971 GACTTCACTTCTCGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9305 FBgn0032512 FBtr0080471 1 1 1 91 2L 13372759 13372777 ATTGGAGATCGAAACCACG 58 13372628 13372705 CATTATCTCCCGTAGTCTCG 57 NA Drosophila melanogaster 61 CG5945 FBgn0032494 FBtr0080450 3 1 1 91 2L 13240702 13240772 TAACGCTCTTGGATGTGGA 58 13240827 13240845 GTCGATATTCTTGAGGCGG 58 NA Drosophila melanogaster 61 CG5439 FBgn0032476 FBtr0080435 1 1 1 60 2L 13178453 13178476 CTCCAATTTCCTGATAACCATTCC 60 13178495 13178513 GGAACCAGATCGTTGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5075 FBgn0032464 FBtr0080421 3 1 1 130 2L 12979934 12979954 CAATTCACCACTCTTGACTGG 59 12980046 12980127 AGTATTTGGACAGGGCCTG 59 NA Drosophila melanogaster 61 CG6180 FBgn0032453 FBtr0080398 2 1 1 60 2L 12708166 12708184 TAAGCTGTACACCCTCTGC 59 12708208 12708226 AAACTTGGGATCCTTGCGA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 1 1 1 60 2L 12452901 12453024 ATTATTGGAAAGGCGTGATGTG 59 12452862 12452881 CCGAGTTACAATGGGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 3 2 2 82 2L 11092419 11092440 TTGATGTATGTAATCCTCGCAG 58 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 Ast-CC FBgn0032337 FBtr0114455 1 1 1 118 2L 11084337 11084818 AGTATCCGATGGTGGTTCC 58 11084237 11084255 ATCTCCGAAGAATTCGCCA 59 NA Drosophila melanogaster 61 CG18666 FBgn0040967 FBtr0080160 2 1 1 60 2L 11034892 11034911 ATGATGATTCCAGTGACGAC 57 11034933 11034952 GGATCGGAATACTGATCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17139 FBgn0260454 FBtr0100836 3 1 1 87 2L 10845167 10845185 GATCTTGGAGTGCATGGTG 58 10845026 10845116 GAAACTTGCGTCCTTCAGG 59 NA Nonspecific Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080137 3 1 2 146 2L 10790360 10790438 GAACTATGGACCTGGACCTG 59 10790541 10790565 GTCACTTTATCCACCTTATAAGCAG 59 NA Drosophila melanogaster 61 Lip2 FBgn0024740 FBtr0080123 1 1 1 88 2L 10706141 10706162 TCAAAGTAATGCTCATCGTGTG 59 10705870 10706092 CCAGTCCATCGTAGTCCAC 59 NA Drosophila melanogaster 61 RpS27A FBgn0003942 FBtr0080016 3 1 1 112 2L 10410037 10410249 CTGAAATACTACAAGGTTGACGAG 60 10410320 10410338 TAGTGACGATCTTCGTGGG 59 NA Drosophila melanogaster 61 LSm-4 FBgn0067622 FBtr0091657 2 1 1 60 2L 10403552 10403746 TTATTTGCACCTCAAAGGATGG 59 10403513 10403531 CCGCGGATATAACATTCGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 3 6 6 81 2L 10398148 10398166 GAGTGCCCTTTGTGTATGG 58 10398210 10398288 ATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 1 6 6 80 2L 10398149 10398167 AGTGCCCTTTGTGTATGGA 59 10398210 10398288 ATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 CG13123 FBgn0032150 FBtr0079917 2 1 1 88 2L 9792937 9792955 GATATACGGGAGCACAGGA 58 9792814 9792886 TTAAGTGCTATGTTCCAGCC 58 NA Drosophila melanogaster 61 CG13117 FBgn0032140 FBtr0079864 2 1 1 64 2L 9736870 9736888 AGAAGTGCATTAGTGGGCA 59 9736916 9736934 GGGCGTGTAGATATTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0301855 2 1 5 118 2L 9257192 9291060 CAACTCTTGTGTCTGAATGC 57 9291140 9291159 ACATAATAACGCATTTGCCC 57 NA InUTR Drosophila melanogaster 61 CG32985 FBgn0052985 FBtr0079757 2 1 1 87 2L 8963275 8963359 TGGGCTACAATAAGGTCGC 60 8963409 8963428 ATTTGAGTCTCTGCCGACTC 60 NA Drosophila melanogaster 61 SoxN FBgn0029123 FBtr0079733 2 1 1 60 2L 8827969 8827990 GATGAATATGTACCATCTGCCG 59 8828011 8828029 CGAGTCAGTCTGATAGTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9468 FBgn0032069 FBtr0079741 3 1 1 84 2L 8780420 8780502 TTCACCTTGGGATTGAAATTCC 59 8780357 8780375 GACCGAAGGGATCGATCTG 59 NA Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 3 1 1 172 2L 8376550 8376634 AAGAGGCGCAGTACTTCTC 59 8376396 8376414 GTTGCGCACATCGTTAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7830 FBgn0032015 FBtr0079613 2 1 1 80 2L 8307065 8307163 TATCGTCATGTTCCTGAATGC 58 8307005 8307023 TTGTTGTGAGCCTTTGGTG 58 NA Drosophila melanogaster 61 tectonic FBgn0031783 FBtr0079209 2 1 1 189 2L 6130212 6130230 AACGTACTGCAACAGTCCT 59 6129908 6130059 TTCGTCGAACCGAGTAGAG 58 NA Drosophila melanogaster 61 CG31642 FBgn0051642 FBtr0079199 3 1 1 231 2L 6118532 6118552 GGTGTTCATCAGTTGAAAGTG 58 6118805 6118824 ATATCTTGCAGTTCTCGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acp26Aa FBgn0002855 FBtr0079155 3 1 1 270 2L 5893863 5893883 CACTTCTTCGAAATGAACCAG 57 5893557 5893575 TTGGATAATCATCCAGCGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 1 1 2 82 2L 5763366 5765976 ATGTTTGGCTCAATGGCTC 58 5763302 5763320 TAAGAGTCGCACTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 H15 FBgn0016660 FBtr0079076 3 1 1 82 2L 5414195 5415359 CAGTGACTTTGATAGGGATCC 58 5415403 5415421 GATCGGGAAAGAATCGCAG 58 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 1 3 3 80 2L 5356384 5356632 CGGACAATCAAGATCGCAC 59 5356676 5356694 ACTTGTCGGCCAGTATCTC 59 NA Drosophila melanogaster 61 ft FBgn0001075 FBtr0077478 3 1 1 80 2L 4208589 4208610 AGAAAGTACCAACAAACACGTC 59 4208232 4208551 TATCGTCACCTTTACAGTCGAG 59 NA Drosophila melanogaster 61 CG42465 FBgn0259955 FBtr0300301 1 1 1 84 2L 3700287 3700369 GCGGATATAAATGGCTTGGT 59 3700412 3700434 CAACATAGGAATAGAGGTCTGTC 58 NA Drosophila melanogaster 61 CG16704 FBgn0031558 FBtr0077550 3 1 1 132 2L 3692498 3692516 CTCATCTGCTGTCTTGTGG 58 3692269 3692287 AGCACTCGTTCGTATCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Sfp24Ba FBgn0259951 FBtr0300296 3 1 1 177 2L 3668409 3668480 CAATCGAATGCCGATTGTG 57 3668250 3668268 AACCCTTGCATTTGAGCTC 58 NA Drosophila melanogaster 61 CG15399 FBgn0031460 FBtr0077730 2 1 1 66 2L 2771707 2771725 TAGAGCTCAAGGATGTGCC 59 2771590 2771677 CTAGTCTTGCCCACACCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3077 FBgn0031457 FBtr0077736 1 1 1 118 2L 2765344 2765362 GATGAGCTGGACAGTCCAG 59 2765159 2765177 GTCGGCTTATACTCAGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9879 FBgn0031444 FBtr0077700 1 1 1 86 2L 2665164 2665182 TTTAAGGCGCTAAACCACG 58 2665289 2665307 TTTAGCTGACGTCCCTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9883 FBgn0031435 FBtr0077693 2 1 1 60 2L 2578691 2578710 CAGTACGGTGAGGTCTTCTG 59 2578733 2578751 CAACGCAAAGAAGACACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34049 FBgn0054049 FBtr0302372 1 1 1 82 2L 2264703 2264783 GAGTGGGCAGATCATTTGG 58 2264639 2264659 CGGACACGCATAATATTCTCG 59 NA Drosophila melanogaster 61 CG17239 FBgn0042186 FBtr0077805 3 1 1 60 2L 2251641 2251659 TGGAGTCTACGCTAACGTG 59 2251599 2251618 TATTCTTTCGATAGCGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33124 FBgn0053124 FBtr0300181 3 1 1 80 2L 2208537 2208617 TGATAGCGAGTTTCATTTCGG 58 2208477 2208496 TCAGGGAATATTGGGTTCCA 58 NA Drosophila melanogaster 61 CG17652 FBgn0031361 FBtr0077904 3 1 1 136 2L 1731803 1731887 AATCGATGACCAAAGACAATCG 59 1731688 1731706 GGCTTTAGATGGTGCTTCC 58 NA Drosophila melanogaster 61 Rrp40 FBgn0260648 FBtr0077883 1 1 1 60 2L 1728965 1728983 CACTTCGACACAAGGAACC 58 1729007 1729025 GGGATGTACCTTCTCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18132 FBgn0031345 FBtr0077919 3 1 1 60 2L 1517212 1517235 GTTCTTCGTAAAGTTCTATGAGCC 59 1517175 1517194 CCAGGTAGTTTCGAAATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lea FBgn0002543 FBtr0077941 3 1 1 80 2L 1387518 1390903 CCTTGAAGATGTTCCCTCTG 58 1387457 1387475 TTCCATTTGAGGAAGACCG 57 NA Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074584 2 1 2 80 X 18153249 18153268 AGAATGGGTTGTGAAATGGG 58 18153125 18153207 GACGAGATTGTTCTTTCGGG 59 NA Drosophila melanogaster 61 CG8565 FBgn0030697 FBtr0074103 3 1 1 82 X 15733461 15733479 TTCGGACCGAGATCAAGAC 59 15733523 15733599 TTTGGTCATCTTGGAGCTAGG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 Smox FBgn0025800 FBtr0071192 2 1 1 82 X 8034938 8035676 CGTTACAGATCAGAAGTGCAC 59 8034876 8034894 AATACTGGAACGGGACTGG 59 NA InUTR Drosophila melanogaster 61 CG14446 FBgn0029850 FBtr0070876 1 1 1 80 X 6122208 6122291 CACTATCTACACAACAAGCAGTC 59 6122326 6122349 GTTATAGTAGTTCGTTCCATGCTG 59 NA Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809,FBtr0070810 1 2 2 71 X 5652363 5652438 CTGGAGACCGACATCAAGG 59 5652473 5652491 GCTATTGCTTAGTGGCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085059 2 1 2 147 3R 22652407 22663447 GTTCTGAGCAAGTGAACCC 58 22663557 22663576 CTATGCTCATCTCACTGCAC 58 NA InUTR Drosophila melanogaster 61 CG31300 FBgn0051300 FBtr0084824 1 1 1 93 3R 21109889 21109907 GGTTGCTCAGGAAGAACTC 58 21109964 21110043 TAGGAAGTCAGGTTGCTCC 58 NA Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 1 2 2 80 3R 20771584 20771602 ATCTGAAGCTACTGTGCGG 59 20771646 20771715 TGTCCTCAATATCGGCCTC 59 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 1 2 2 89 3R 19769944 19769962 TCTGCGTCATCTTCTTCCA 58 19769815 19769893 GGACATTGAGTAAGAATGGCT 58 NA Drosophila melanogaster 61 topi FBgn0037751 FBtr0082135 1 1 1 80 3R 5601360 5601440 CAATCGGTCTTTCATGGATCTC 59 5601480 5601499 CTGGACCAAACATGTTGGAC 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 1 5 5 93 3R 3697632 3697746 GTCAATTTGTTGGAGCGAC 57 3697557 3697578 GATCCTATAATAAACTCGTGCG 57 NA Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081580 2 1 2 84 3R 3113074 3113217 CCTACTTTAGATCAATGGTCAACC 59 3113260 3113278 TGACTGCATCCATTCTCGA 58 NA InUTR Drosophila melanogaster 61 CG33051 FBgn0053051 FBtr0075230 2 1 1 60 3L 17419950 17420039 CCACTACCCTAGAAACAACAG 58 17419910 17419929 AGAAAGTCCTCCTTCCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 foi FBgn0024236 FBtr0076624 3 1 1 81 3L 8524833 8524854 ATCATTCAATATCTGGTAGCGC 58 8524896 8524976 CTGCAAGAGAATGAGGCAG 58 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 2 2 2 63 3L 6940961 6940979 CAAAGCGCCTGATCTATGG 58 6941006 6941094 CATTTGATGCCAGTTGCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 1 2 2 90 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196954 TCATCGTTGGGAATTAAGGAG 57 NA Drosophila melanogaster 61 sktl FBgn0016984 FBtr0071563 3 1 1 94 2R 16717886 16719296 ATTTCTGTAGAGCGGAAATCC 58 16717812 16717832 GCTGATCCTTTAGCCTATCCT 59 NA InUTR Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 2 2 2 81 2R 13493408 13493488 GTCACAGTGTTGCTCAACC 59 13493345 13493366 CCTTTAGCTCGTTTAGCATGTC 59 NA Drosophila melanogaster 61 CG8320 FBgn0034059 FBtr0087202 3 1 1 95 2R 11880353 11880371 CTTTCTACCGGAACATGGC 58 11880430 11880507 TGTGCATAAACACTGAGGT 57 NA DesignRelaxed Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 3 4 4 87 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877050 9877070 GCTCCATTTCAATCTTGTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG1360 FBgn0033195 FBtr0088951 3 1 1 87 2R 3477155 3477174 AAATTTGCTGTGGAACTGTG 57 3477027 3477109 CCTACAGGTGGTTATGTAATAGG 58 NA Drosophila melanogaster 61 Cyp6w1 FBgn0033065 FBtr0085987 1 1 1 80 2R 2061661 2061802 TCCTCTAATGGTGAAGATTGGA 58 2061843 2061861 TCCTTCACTTGGACTTCCG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-525k FBgn0083028 FBtr0113538 1 1 1 60 2L 5202447 5202468 AACTATGTAATAGGGACGAACG 57 5202483 5202507 CAAGTCATCTGCTATAGTATGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 2 2 2 80 2L 18010979 18010999 AATGAGTATTACGGAGACTCG 57 18010851 18010937 GCTGGAATACTCCAACAGG 57 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300932,FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 3 6 9 285 2L 15263656 15263779 TGATGACATGCACACTTGC 59 15263389 15263407 AACGGTCAGTGTCTCTAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 2 2 2 82 2L 10839575 10839595 CCACATGATTGAATGGTTCCT 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079482,FBtr0079483 2 2 2 60 2L 7765141 7765221 TCAGAAATGCCAAGGATATTCG 59 7765242 7765260 TCACCCATGATGATCTCCT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mio FBgn0031399 FBtr0077835 1 1 1 80 2L 2219095 2219170 TATGCTACAGGAGTGAGCAG 59 2219212 2219231 CTATAAAGCGATCCAGCTCC 58 NA Drosophila melanogaster 61 CG33127 FBgn0053127 FBtr0078052 2 1 1 60 2L 322530 322551 GGAAGTGACAATATAGCCTTGC 60 322572 322590 GAACTCGAGCGTTGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121,FBtr0078122 3 3 3 82 2L 200247 200265 GTAGTGGACCTCCAAGGAC 59 200310 200389 CATTTGTGGAGAGTCAGCTG 59 NA Drosophila melanogaster 61 CG13694 FBgn0031219 FBtr0078160 3 1 1 60 2L 116055 116073 CATTGTGGAGGAATGGAGC 58 116013 116034 GTTATAGCTTCCCAAGTCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 3 1 1 211 2L 84259 87020 GATTCACCCAATTCCAACGA 58 84067 84085 GGAGTCGTCAAACCTACGA 59 NA DesignNoJunction Drosophila melanogaster 61 Mst77F FBgn0086915 FBtr0078270 3 1 1 105 3L 20810624 20810704 ATTCTGCGGAACCATTGGA 59 20810537 20810557 CAGCCACTTATTTCAGAGTGC 59 NA Drosophila melanogaster 61 Cyp6t1 FBgn0031182 FBtr0077212 2 1 1 60 X 21389467 21389485 TCGTCGTATGTGCATTGAG 58 21389425 21389443 GGTGAAGAGGTGTAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085823 3 1 3 92 3R 27501092 27501187 ACGATCCAAAGGGTATACCC 59 27501242 27501260 TAGTTGGCTTTGGTGATGC 58 NA Nonspecific Drosophila melanogaster 61 CG31041 FBgn0051041 FBtr0085470 2 1 1 156 3R 25416340 25416358 CTGATCGACTCAAGCTACC 57 25416065 25416083 TCTCCAGTTCCTTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14369 FBgn0038159 FBtr0082789 1 1 1 60 3R 9418078 9418100 CTATCCGTACAACTACTATGGCT 59 9418040 9418058 GTAGCCACTGCCATAACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 2 3 3 95 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526040 526889 CATGGTCGCTCATAACACTG 59 NA Drosophila melanogaster 61 Sod FBgn0003462 FBtr0076229 1 1 1 243 3L 11105944 11106687 TCTTCGAACAGGAGAGCAG 59 11105719 11105737 GTGATGTTGACCTTGGTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 3 2 2 98 2R 13987097 13987187 CGAAGATAAGCATGCATAAACG 58 13987246 13987264 CAGATGAGCATTGTGAGCG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 3 12 12 161 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 CG8366 FBgn0034054 FBtr0087201 1 1 1 80 2R 11842950 11842971 ATGTATCGCTTAAGATCGTCGA 59 11843011 11843087 CACAAGTACATGCTGCAGTG 59 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687,FBtr0078686 2 2 2 80 3R 1362363 1362443 GCCCAAATAGAGATTGTTCG 57 1362484 1362504 GGTCAGGTATTCACAGATCTC 57 NA Drosophila melanogaster 61 CG32541 FBgn0052541 FBtr0074650 2 1 1 102 X 18905710 18905796 AACAGCAGGTTAAGTGGTC 57 18905862 18905880 TAGTCCAGCGATGAAGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32551 FBgn0052551 FBtr0290003 1 1 1 60 X 18333167 18333187 ACTTTGAGGAACTCAAGAACC 58 18333208 18333227 ACTTCATTGGGTGAATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 2 3 3 198 X 16258648 16259240 GAACTGTTGCGTCAAGAGC 59 16259402 16259420 TGAACAGTGTCTCCTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15601 FBgn0030673 FBtr0074055 1 1 1 71 X 15605453 15605471 CTTTCTACGCTCCGTTTCC 58 15605556 15605576 GTTAATTGAGCACTGGAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15727 FBgn0030410 FBtr0073709 3 1 1 272 X 12523509 12523527 AAGGACGATCGATCCAAGG 59 12523191 12523209 CAATTGCTCCACATCGTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15928 FBgn0040856 FBtr0301091 1 1 1 67 X 11878821 11878839 ATATTGCCATCATCGGCGA 59 11878772 11878790 TTTGTTAGACCCTTGCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0100305,FBtr0073584,FBtr0073587,FBtr0073586,FBtr0100304,FBtr0073588,FBtr0100303,FBtr0073585,FBtr0100302 1 10 10 80 X 11848175 11848194 CTTCCCTATGTCTGTTTGCT 57 11846239 11848134 TTTGATATTCCCGAACACCTG 58 NA Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 3 2 3 167 X 10986859 10986994 TTTCCACCTGAGACAGCTG 59 10987125 10987143 GGCGAAAGGTGTATTCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32690 FBgn0052690 FBtr0071437 2 1 1 113 X 10098473 10098494 GCATTTCTCGAACAAGTTACAG 58 10098633 10098651 TTGGATTCCTCGGATTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12111 FBgn0030050 FBtr0071232 1 1 1 80 X 8464771 8464857 CGAGGTCTATAATGGCATTCC 58 8464711 8464733 GGCTCGATGTAGTAATAGTTGTC 58 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236,FBtr0071238,FBtr0071237 1 3 3 80 X 8382563 8382645 TTTGAGAAGGAAATTCCTGGC 58 8382503 8382524 TTCTGTCATGGTTCCATATGTC 58 NA Drosophila melanogaster 61 CG32718 FBgn0052718 FBtr0300461 3 1 1 81 X 7673084 7673162 AACTTTCAAGCTAACAAGCCC 59 7673205 7673223 GATTAGCTTCATCGCTGGC 59 NA Drosophila melanogaster 61 CG32733 FBgn0052733 FBtr0071001 3 1 1 61 X 6846780 6846798 CGTTACCTCACTGATGCTG 58 6846823 6846841 CAGATCCAGCCTGATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4575 FBgn0029920 FBtr0071000 2 1 1 168 X 6844580 6844820 AATATGGAGGCCTTTCAAACTC 58 6844949 6844967 TTCTGGCGTTCCAGATAGG 59 NA Drosophila melanogaster 61 raptor FBgn0029840 FBtr0070885 2 1 1 83 X 5982239 5982315 CAAGATTCCAGGCAAGGTC 58 5982174 5982192 GCTATCGTGTCCGTAATGG 58 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 1 3 3 91 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654771 5654792 ATGTATAACTCCATCTCCTCGA 58 NA Drosophila melanogaster 61 wds FBgn0040066 FBtr0070438 2 1 1 80 X 2481350 2481368 GAAGACGTATACGGGTCAC 57 2481412 2481484 CTCACGATCCACTTTCCTC 57 NA Drosophila melanogaster 61 y FBgn0004034 FBtr0070071 1 1 1 87 X 250888 250907 TACCTGTTGGAGTCGAACAC 59 253656 253674 ATATAGGTCAGAGTGGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 1 4 4 103 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449554 3449572 TTGATACTGATCTCCCGCT 57 NA Drosophila melanogaster 61 Su(Ste):CR42416 FBgn0259847 FBtr0300144 1 1 1 81 U 6868948 6868966 TTAAATCGCCCAAGTCCTC 57 6869011 6869029 TTGACTTCGTAATGCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42622 FBgn0261337 FBtr0302252 1 1 1 60 U 549183 549202 TTAAGAGAAATGAAGCGCGT 58 549222 549243 ATTGCTCATAGATTCCATCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 3 2 2 80 3R 27386438 27386456 TGGATTCGGTTTACCAGGA 58 27386500 27386584 AAGAGTGGCATCTGTAGGG 58 NA Drosophila melanogaster 61 zwilch FBgn0061476 FBtr0085777 3 1 1 80 3R 27036969 27037050 GTTTCCAGTGTGATGACAAGG 59 27036909 27036930 ACTTAAGTGAGCGAATCTTGTG 59 NA Drosophila melanogaster 61 CG15543 FBgn0039799 FBtr0085700 1 1 1 60 3R 26568921 26568940 TTCTACCACCGAATAGTGCT 58 26568963 26568981 CATATGCCAAGGACCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 3 2 2 81 3R 25828885 25828977 AAGGACAACATTGTCATGGC 59 25829019 25829039 GGTCGAAGTAAGATATGACGC 58 NA Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 1 2 2 127 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763337 25763356 GTATTCATCCGTGTTCCTGG 58 NA Drosophila melanogaster 61 ca FBgn0000247 FBtr0085484 1 1 1 80 3R 25634116 25634199 TGTTATGCTGCTGATAACTTCC 58 25634237 25634258 GGATAGACGTATTTGATTGCCT 58 NA Drosophila melanogaster 61 CG12068 FBgn0039695 FBtr0085481 1 1 1 60 3R 25620713 25620731 CAGCTAAGGGACATACTGG 57 25620754 25620773 CATTGTTTATCAGTGCCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pcd FBgn0024841 FBtr0085458 2 1 1 105 3R 25548983 25549001 GATTAAGCCGAACTGCCAG 59 25549070 25549169 TTGCGACAGGCTTCTACTC 59 NA Drosophila melanogaster 61 CG11837 FBgn0039627 FBtr0085360 2 1 1 81 3R 24876083 24876101 ACCTTTAAGGTGACGTCCG 59 24876145 24876228 CTTCAATCGGCTCATTCCTG 59 NA Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085357 3 1 2 181 3R 24860519 24860596 CAAGGAACTGAAGAGGCAG 58 24860741 24860759 AGTGCGACATGTAAAGGTC 57 NA Drosophila melanogaster 61 CG13972 FBgn0039522 FBtr0085212 3 1 1 60 3R 23342397 23342415 GACAAGGAGATGGCAAACC 58 23342355 23342375 CCTTATCCTCGAGACAAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mrt FBgn0039507 FBtr0085174 2 1 1 81 3R 23104818 23104915 GAGCCAATTGATATAGGCTATGAG 59 23104760 23104778 CCTCGTAGTCGAACGACTC 59 NA Drosophila melanogaster 61 HLHmgamma FBgn0002735 FBtr0084955 3 1 1 62 3R 21826007 21826025 AATGTCAGCCTAGGCACTC 59 21826051 21826069 TGGCTGGATCTGATTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471,FBtr0301466,FBtr0301468 2 7 7 103 3R 21570599 21570714 AGCAATGCATATGCTCCAG 58 21570514 21570532 GAGAACAGTGGCCATTCAC 58 NA Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 1 2 2 89 3R 21305993 21306115 CAGAGAATATTACTGCATGATCCAG 59 21305928 21305946 GTGATTGGGTTGACGAAGC 59 NA Drosophila melanogaster 61 CG13653 FBgn0039288 FBtr0084804 1 1 1 128 3R 21021366 21021384 AAGAATCCAGCCAAGACTG 57 21021544 21021562 ATTGAGCAGCTCCTTAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 2 3 3 80 3R 20700373 20700446 CAGGATACAATTCTGGGCTG 58 20700312 20700330 GACAAATCTGCGGATCCAG 58 NA Drosophila melanogaster 61 Apc2 FBgn0026598 FBtr0084552 2 1 1 83 3R 19990522 19990603 ACTGCTACAGGTTCTTGCT 59 19990648 19990668 CCCAGCTCGTTAAAGATAGTC 58 NA Drosophila melanogaster 61 SPE FBgn0039102 FBtr0084440 2 1 1 118 3R 19513343 19513422 GGATTGTTAGCTACACCGAC 58 19513503 19513521 CATGTTCTCGGTAAGTCCC 57 NA Drosophila melanogaster 61 Or94b FBgn0039034 FBtr0084342 2 1 1 157 3R 18815971 18815992 ACTAATAGTGTCTTCGGTACCA 58 18816109 18816250 GCATTGTTGATGGTCTTCAC 57 NA Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483 3 1 2 97 3R 18318733 18318998 AAATCATGATGTCAGACTACGG 58 18319055 18319074 CTCCGCTCTTATGTTCTTGC 59 NA InUTR Drosophila melanogaster 61 mRpL35 FBgn0038923 FBtr0084171 1 1 1 60 3R 17849868 17849887 TATAAGCCCTATCACAGCCG 59 17849907 17849928 ACACCTTAAAGGTCTTTGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3337 FBgn0038871 FBtr0084107 3 1 1 107 3R 17049040 17049058 GAACGTTCTCAGCTTCCTG 58 17048889 17048908 TTTAGAGCACCACAATGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 2 2 4 119 3R 16894631 16894649 AAGGACAAGACGCTGATCC 59 16894732 16896454 GAGGTCGTCCTTGATCCAG 59 NA Drosophila melanogaster 61 CG14292 FBgn0038658 FBtr0083725 1 1 1 65 3R 14731300 14731318 CAATTGTTCTACTGGCGGC 59 14731178 14731196 TTCCAACAGTAGCTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17803 FBgn0038547 FBtr0083528 1 1 1 80 3R 13626494 13626515 TGCTCAGGATCTATATGACAGG 59 13626235 13626453 CCTTGTTGTATCCACACCC 58 NA Drosophila melanogaster 61 CG34280 FBgn0085309 FBtr0112476 1 1 1 150 3R 13229268 13229289 CTGTACCTATAGGAATCCTTGC 57 13229068 13229086 ATTCAGCTGCTTCTTCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 1 2 2 80 3R 12265066 12265342 CAATAGAGGCATCAAGAATGAG 57 12265007 12265028 AAGGCTGTCTTATAACTGAAGG 58 NA Drosophila melanogaster 61 CG17930 FBgn0038416 FBtr0083271 3 1 1 88 3R 12153792 12153810 CAACCACGGTGATCATCAC 58 12153861 12153940 AAAGAGAAGGGTAGCTGCTG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083265,FBtr0083261,FBtr0301304,FBtr0100333,FBtr0083263 2 9 9 81 3R 12122761 12122780 AAGGCTGATACACTCAAGGA 58 12122824 12122912 GTCCATCACAAAGCACCTC 58 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253,FBtr0113241 1 2 2 80 3R 12005607 12005685 CACCATAGCCAAGTGTCTC 57 12005727 12005747 CGAACTATTGTGGGATATTGC 57 NA Drosophila melanogaster 61 CG7091 FBgn0038099 FBtr0300278 1 1 1 91 3R 8805121 8805140 GCAACATCCAAGGATATCGA 57 8805194 8805270 GAATGGTTACCACTGGCTG 58 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082603,FBtr0082604 2 2 2 60 3R 8217508 8217581 GTCCGGGTGTCATAATTGC 59 8217466 8217484 TACAGGTTGTCGATCCAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4066 FBgn0038011 FBtr0082566 1 1 1 60 3R 8137739 8137758 ATTCTATCACCTCCTCACCA 57 8137776 8137799 GACTCGGTTATAGATTCTGTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14740 FBgn0037988 FBtr0082552 1 1 1 80 3R 7888321 7888341 GGCCAGATCAGTGTTAATAGC 58 7888191 7888279 TTTGTCCAAGCTGGATGTC 58 NA Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 3 1 1 63 3R 6995717 6995738 CTTCAGAGATGTGTTTATCCCA 58 6995603 6995696 GCTCAGTTCGTTTATCAATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Dg FBgn0040253 FBtr0082377 1 1 1 62 3R 6991572 6991592 GACATTTATGTTCCGGAAGTG 57 6991342 6991360 ATCAAACTGAGCCTTTCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301932 2 1 2 93 3R 4635384 4635463 TACTTTGGTCCAGGGTAGC 58 4635309 4635327 AATGGTCTTGTCGATGGTG 57 NA Drosophila melanogaster 61 CG33325 FBgn0053325 FBtr0081952 1 1 1 61 3R 4506028 4506046 CTGGAACGATCGGATTCCA 59 4505517 4505535 TTGGCCAGAGATTCCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31496 FBgn0051496 FBtr0081582 3 1 1 115 3R 3170920 3170938 CTCGGCCTAAGTCTTATGC 57 3171273 3171291 ACAACGTTGCCAATGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42544 FBgn0260713 FBtr0301214 3 1 1 225 3R 3130440 3130458 CCGCGACCAATAGATTTGG 59 3130646 3130665 ACAAACATGGCCATAAGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081581,FBtr0081580 2 2 2 253 3R 3112027 3112045 CTTATCCACGGACGGACTC 59 3112397 3112416 AATCGCTGAGACATCCTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730,FBtr0078731 1 2 2 88 3R 1483646 1483872 CCGTACAAAGATTGAGCGC 59 1483576 1483594 TATGAGCGTACAACTGGGC 59 NA Drosophila melanogaster 61 Cont FBgn0037240 FBtr0078917 2 1 1 80 3R 212128 212203 GTTATAAGGTTCGCATTTGGG 57 212245 212263 CCAGTTTCTGTCCGATTGG 58 NA Drosophila melanogaster 61 tRNA:CR32324 FBgn0052324 FBtr0072688 1 1 1 60 3L 1398414 1398435 TGTCTAGTGGTTAGGATATCCG 58 1398456 1398474 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7369 FBgn0037188 FBtr0078530 3 1 1 82 3L 22739913 22739932 AGACTCGTAACCTGGAATCG 59 22739973 22740064 TTTAGGGTACTTGACTATCTCGC 59 NA Drosophila melanogaster 61 CG33768 FBgn0053768 FBtr0091769 3 1 1 97 3L 22640291 22640311 TAATATTCGTATCGCAGGCAG 58 22640428 22640446 AGACGTCACGTTTAGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14567 FBgn0037126 FBtr0078454 1 1 1 60 3L 21731258 21731279 CATAGCTACGAGATTTGGAGAG 58 21731219 21731238 CGGTAGATTGACTAGAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb8 FBgn0037121 FBtr0078432 3 1 1 76 3L 21722167 21722190 CCTCCGCATATAAGATCAAATACG 59 21722295 21722314 CCTCAAAGAGTACTCCAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9472 FBgn0036874 FBtr0074982 2 1 1 60 3L 19478369 19478387 GTCTGGTACGATCCTCGAC 59 19478327 19478345 CCACGATCATTGCATCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33051 FBgn0053051 FBtr0075230 3 1 1 60 3L 17419948 17420037 ACTACCCTAGAAACAACAGCC 59 17419908 17419927 TCAGAAAGTCCTCCTTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7724 FBgn0036698 FBtr0075284 3 1 1 97 3L 17050749 17050768 GTTCCTGATACCCGGATACG 59 17050824 17050921 CCAGATATTCCTTCTGGTTATGC 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 2 4 4 86 3L 16782611 16782629 GACGAGGGTATCGAGTTCC 59 16782405 16782561 GAGGACGGCATCATACTCC 59 NA Drosophila melanogaster 61 CG12436 FBgn0036637 FBtr0075401 3 1 1 63 3L 16522727 16522745 TAGCAGCAGTTTGATTGCG 59 16522631 16522649 GTGGAAGGTAGATGGGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS31 FBgn0036557 FBtr0075519 2 1 1 107 3L 15998859 15998877 GGAAGCGAGTCCTCTTCAG 59 15998945 15999032 CATGCCCACGATAATATCACTC 59 NA Drosophila melanogaster 61 elgi FBgn0036546 FBtr0075510 1 1 1 80 3L 15950101 15950120 CGAAATTCCCTGACTACTGC 58 15950162 15950254 ACAGGTGATTGACAGTCTGG 59 NA Drosophila melanogaster 61 CG32109 FBgn0052109 FBtr0075918 1 1 1 80 3L 12739270 12739290 AAGGACTACGAGGAAGTTGTG 59 12739330 12739410 TTCCTCCTTGTGATCAGAACC 59 NA Drosophila melanogaster 61 CG32095 FBgn0052095 FBtr0076077 2 1 1 60 3L 11818538 11818557 GAGATGCACTCGAACTACCT 59 11818497 11818515 CGACTTGGGAATGCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or67c FBgn0036078 FBtr0076300 1 1 1 80 3L 10236938 10237018 CAAGTGCCTTAAACTATGCGA 59 10236878 10236896 TGCATGGATGCCATAAGGA 59 NA Drosophila melanogaster 61 Fdxh FBgn0011769 FBtr0076498 3 1 1 88 3L 9363791 9363874 CGGATGAAATAGTGAACATCAC 57 9363724 9363743 CAAGTACAGAACATTGTCGC 57 NA Drosophila melanogaster 61 Fdxh FBgn0011769 FBtr0076498 2 1 1 87 3L 9363791 9363874 CGGATGAAATAGTGAACATCAC 57 9363725 9363744 AAGTACAGAACATTGTCGCC 58 NA Drosophila melanogaster 61 Cp19 FBgn0000358 FBtr0076573 2 1 1 98 3L 8723010 8723118 GAACAAGTTCGCTACTCTGG 58 8723179 8723197 TAAGATCGCTGTCCGTAGC 59 NA Drosophila melanogaster 61 CG42661 FBgn0261537 FBtr0302559 2 1 1 61 3L 7459799 7459817 ATCCTGACAAGACGACAGC 59 7459840 7459927 ACATAAGAACGTAAGGAGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rac2 FBgn0014011 FBtr0076867 2 1 1 60 3L 7427272 7427290 TGTGCCGATAATCCTGGTC 59 7427230 7427249 CTCGATCGTCTGCTTATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 1 2 2 83 3L 6121564 6121641 GTTTGTCTGTGCTCTGCTG 59 6121499 6121517 AAGCCGAACTTGTAGGGAC 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 2 6 6 60 3L 5765472 5765548 GAAGGTATCTGCCACAAAGC 59 5765568 5765589 CTGTATACAAAGCGTGATTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 1 1 1 68 3L 4003902 4003920 TACATGGACGACAAGACCG 59 4003949 4004141 TTGATACTGATAGTTCTGCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 1 3 3 131 3L 3328065 3328083 TGGTGATCCTCAACTTCCC 59 3328178 3328263 CATTCACATCGACCTTGGC 59 NA Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 3 2 2 117 3L 1889846 1889864 TACGCCTCCAAGTACATCC 58 1889945 1890033 GATCACCGATCCACTCTGG 59 NA Drosophila melanogaster 61 Cpr62Bc FBgn0035281 FBtr0072869 1 1 1 116 3L 1841180 1841771 TCGATTACCATGCCTACCC 59 1841082 1841100 AGTAGGATCCCTTGACGAC 58 NA Drosophila melanogaster 61 rho FBgn0004635 FBtr0072694 2 1 1 144 3L 1466899 1467049 TCATCTTTGTCTCCTGCGA 58 1467157 1467175 TTTAGCACCAGAAAGCCGA 59 NA Drosophila melanogaster 61 CG42553 FBgn0260755 FBtr0301252 2 1 1 108 3L 835231 835249 CGTAAACGAGCGAAGTCTG 59 835318 835395 ATTGATACCCTGCATCTTAGCT 59 NA Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597 2 1 2 95 3L 831381 831400 AGTACTTCGATACAGTGCCG 59 831232 831329 GATATAGATAGTGGTTGCCAAACTC 59 NA Drosophila melanogaster 61 CG34454 FBgn0085483 FBtr0112760 3 1 1 90 3L 232022 232041 CAATACAATCCCATTTGCGG 57 231884 231970 TTTGAATGTCAGCTCCACAG 58 NA Drosophila melanogaster 61 5SrRNA:CR33443 FBgn0053443 FBtr0086435 1 1 1 60 2R 15620525 15620543 ATACATCGGTTCTCGTCCG 59 15620483 15620502 TATAAGTACTAACCGCGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 spz6 FBgn0035056 FBtr0072370 1 1 1 80 2R 20646249 20646269 GGAGATCTAAACAAGGGTCAG 57 20646309 20646389 AATAAGTTCGAAGGGATAGGG 57 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 CG13558 FBgn0034869 FBtr0072056 2 1 1 60 2R 19387552 19387570 ATGCTGAACATTGTCGAGC 58 19387594 19387612 AGATCATCGGTTGCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 2 1 1 70 2R 18928885 18929133 TGAATGGACTTGGATCCGA 58 18926510 18926528 AACTGGTTCAACCTGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2921 FBgn0034689 FBtr0071800 1 1 1 82 2R 17962310 17962328 TTGGATTGATCTCCAGGCT 58 17962191 17962264 ATCTCGATCGGGTTCTTCG 59 NA Drosophila melanogaster 61 CG34204 FBgn0085233 FBtr0112397 3 1 1 107 2R 17684156 17684235 ATAACATTTCTCGAGCCCG 57 17684306 17684324 CACCGCATTTGTGAGACTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 2 2 2 80 2R 17037697 17037778 GAACAAGAGTACCGCATGC 59 17037635 17037656 CGCATTTAATAGAATCTCGGGA 58 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086342 2 1 2 158 2R 15671384 15671470 CGCAAGCCAACATAGACAG 59 15671244 15671262 CCAGAATGCACTGTGAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30458 FBgn0050458 FBtr0086999 2 1 1 134 2R 13046378 13046499 CATCTCCTCAAGATGAAATTCC 57 13046265 13046283 AATGTAGCTCTTCACAGGC 57 NA InUTR Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 3 2 2 204 2R 12473800 12473818 AAGATCCTCAGCTCTGTGG 58 12473986 12474004 TCTTGGCCTCCTTCTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-cys FBgn0027091 FBtr0087234 2 1 1 80 2R 12032152 12032174 GAAGGATACTCTTGACTACTCAG 57 12032212 12032291 TTCAGGAAGAACTCATTGAGG 57 NA Drosophila melanogaster 61 CG30091 FBgn0050091 FBtr0087277 1 1 1 80 2R 11568343 11568421 ACTCAGCTCACAGTTACCT 58 11568464 11568483 CACGTTGTATATCTCGTGGG 58 NA Drosophila melanogaster 61 alphaPS4 FBgn0034005 FBtr0087371 1 1 1 80 2R 11148510 11148531 CTAAATTTACACCCATAGCCCT 58 11148572 11148649 AATCCTCGCAGAAATCTCC 57 NA Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 1 2 2 80 2R 11035856 11035926 ATAGATATAGGCTGCGGCTC 59 11035969 11035987 TTCCAAAGCCAACATGTGC 59 NA Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087558 2 1 2 203 2R 10258466 10258485 AATAATTCCCTTTCGGGCTG 58 10258224 10258243 TCTAAACGGCACTTGATGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42288 FBgn0259184 FBtr0299668 2 1 1 203 2R 9978869 9978960 GGAGTGCACAATAACAACGA 58 9979190 9979208 ATCTTCGTAGGCGAAGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 1 3 3 80 2R 9837285 9837367 CTCAGATGCAATCATTCCCAC 59 9837225 9837245 ACTTGTCCAGGAAGTACTTGG 59 NA Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 2 2 2 80 2R 9089463 9089481 ACGGAGGAACTTTACCAGC 59 9089523 9089607 GGATGTATTGCTGGGATAGCT 59 NA Drosophila melanogaster 61 CG13326 FBgn0033794 FBtr0087779 1 1 1 80 2R 9018466 9018485 CAGAAAGAGGAATACCGCAC 58 9018350 9018425 AAAGGAACGCATTAGAAGCTG 59 NA Drosophila melanogaster 61 Amph FBgn0027356 FBtr0087828 2 1 1 80 2R 8495155 8495173 TTCTGGTCACCAACTTGCA 59 8495214 8495436 CCAGTTCCGAGTAAATCTTAGC 59 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898,FBtr0087897 2 2 2 93 2R 8216822 8216843 GACTTCACTAAGAATTTGCGTG 58 8216896 8216979 TCTCTTCGTTCTTGATTGCA 57 NA Drosophila melanogaster 61 CG13170 FBgn0033703 FBtr0087996 3 1 1 68 2R 8127946 8127964 GTTTGTCCTGTCATTCGCG 59 8127994 8128014 CATAACTTGGGTGTGGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 1 2 2 89 2R 7564736 7564754 CTTTCCACGATCATCGTGG 58 7564806 7564881 CAGAAGAATCTTTCTGCCCA 57 NA Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675,FBtr0089674 3 2 2 60 2R 5973577 5973597 TTGCCACTATCATTTCGATCC 58 5973537 5973557 ACCAATAGGAGTATCTTCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1667 FBgn0033453 FBtr0088479 3 1 1 83 2R 5731851 5731869 CTCAAACTTTCACTGCCCG 59 5731910 5731986 GAAGGTAACATTATTCTTGTCCTCG 60 NA Drosophila melanogaster 61 CG1688 FBgn0027589 FBtr0088495 3 1 1 93 2R 5660106 5660124 GCTAACAGTGAGACGAGCT 59 5659922 5660050 ACAATTGACAGGCATCTCCT 59 NA Drosophila melanogaster 61 CG1688 FBgn0027589 FBtr0088495 2 1 1 90 2R 5660106 5660124 GCTAACAGTGAGACGAGCT 59 5659925 5660053 ATTGACAGGCATCTCCTTCC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0299846,FBtr0301766,FBtr0300527 3 5 5 80 2R 5363661 5363738 AGAACGAATCAAGAACGAAGC 59 5363778 5363798 GCTGAAGATTCTGAAGTGAGG 58 NA Drosophila melanogaster 61 PGRP-SC2 FBgn0043575 FBtr0088709 3 1 1 60 2R 4604795 4604815 CACTAACTGGAACTCCAAGTC 58 4604836 4604855 GGTGTTGGTATTGTAGTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 3 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 2 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 1 3 3 80 2R 1866870 1866888 ACCTTCCTGTCGTAAACCC 59 1866167 1866829 TACGGCTTAAGTTCACAATGAG 58 NA Drosophila melanogaster 61 His1:CG33801 FBgn0053801 FBtr0091805 1 1 1 60 2L 21417168 21417187 AGTTGAGAAGAAAGTGGTCC 57 21417210 21417228 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm10 FBgn0032929 FBtr0081475 2 1 1 118 2L 21181117 21181135 AAGATGTCCCGACGTTCTG 59 21181276 21181295 ACTGCAGTAAATGTTTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31677 FBgn0051677 FBtr0081407 2 1 1 60 2L 20603966 20603986 ATGGCCAATATTCCAATCCAC 58 20603926 20603945 AGTGTGGCTCTTTGTATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdc23 FBgn0032863 FBtr0081362 2 1 1 123 2L 20461036 20461114 CTAGACTCAGAGGATCGCA 58 20461201 20461219 AACTGGTATCTGCATTCGC 58 NA Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081370 3 1 2 96 2L 20387588 20399219 TTGTGAATGGAAAGGGCAG 58 20387510 20387529 TCTGTACTAAAGCTGCTGAC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15173 FBgn0032744 FBtr0081178 2 1 1 80 2L 19044078 19044168 CTTGACAAAGAATTGGTTCGG 58 19044018 19044036 AAGGCCTCCTTAAAGAGGT 57 NA Drosophila melanogaster 61 CG34171 FBgn0085200 FBtr0112362 3 1 1 80 2L 18378783 18378802 ATAATCACTTCTGCACCGGA 59 18378843 18378937 TTCGTTTAGGGTCTGTAATGC 58 NA Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0080949,FBtr0114502 3 2 2 80 2L 16907373 16907392 CTCCCTTACTGGTCAAGTGG 59 16907432 16907522 ACCTTTACTACGGTTTGTTGAC 59 NA Drosophila melanogaster 61 glu FBgn0015391 FBtr0080935 2 1 1 86 2L 16734395 16734413 TCTCCGCTGTACTTCATGG 59 16734259 16734349 CGTACGTTCCTTGATATAGTGAC 58 NA Drosophila melanogaster 61 CG13245 FBgn0045827 FBtr0080802 2 1 1 91 2L 16004995 16005013 CAACCTTAAACGTTCACCG 57 16005140 16005158 GATTATTGCAGGCCAGGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ms(2)34Fe FBgn0261529 FBtr0080623 3 1 1 80 2L 14331939 14332074 ACATATTCCGAAAGGAGACCA 59 14332113 14332134 CCTGTGAACTACTTATGCTGAC 58 NA Drosophila melanogaster 61 CG16957 FBgn0032519 FBtr0080523 1 1 1 60 2L 13395632 13395652 GAACACATTACGAGAGTGGGA 59 13395592 13395611 GAGCTTTCCAACAAATGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139,FBtr0089910,FBtr0113040 3 5 9 113 2L 13275764 13275783 GGAATAGTCCGACCATCGAG 59 13275859 13276258 AGACTCCATTACCTTGCGG 59 NA Drosophila melanogaster 61 CG14930 FBgn0032366 FBtr0080245 2 1 1 81 2L 11521170 11521188 TGGTATGCTGAAGGACCTG 59 11521045 11521127 CCTTGCCAAAGTATAAGCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 abo FBgn0000018 FBtr0080168 1 1 1 127 2L 10974288 10974306 ACGGAAAGTCAGAAGTCGT 59 10974122 10974140 GTATCGGTACCATTTGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Nup107 FBgn0027868 FBtr0080121 2 1 1 211 2L 10733952 10733971 TACAAGGCGTATCTGTCTGG 59 10733696 10733778 AGTTCGATGGTTTGCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 Cpr30F FBgn0051876 FBtr0079897 3 1 1 64 2L 9932926 9932944 CATTGTGAAGCCACTGCTG 59 9932880 9932899 AGTAGGCGAAATCGTAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0300866,FBtr0290197,FBtr0300870,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 9 9 85 2L 9906082 9906100 AATCACCGGAATTTCAGCC 58 9905954 9906035 TCGCCGTTTGTTGATATTCTG 59 NA Drosophila melanogaster 61 CG31709 FBgn0051709 FBtr0079856 3 1 1 82 2L 9579138 9579158 GACTTACTACAGGGAACAGGG 59 9579015 9579099 CTCTAAGCTTAAATAATACCGCCC 59 NA Drosophila melanogaster 61 CG3748 FBgn0032110 FBtr0079803 3 1 1 60 2L 9343765 9343784 AGACTCCTATCCGTATCCCT 58 9343806 9343825 TTCCGCACCATTGATTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 1 2 2 84 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935749 8935895 TTACGCCAAAGAACTGGAG 57 NA Drosophila melanogaster 61 CG14015 FBgn0031716 FBtr0079126 3 1 1 98 2L 5538026 5538104 TTCATTGGACACATAAGGCTC 58 5537948 5537966 GAAGACAGCTCCATTGCTG 58 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 2 2 3 63 2L 4879192 4880393 ACTCGCATACATACAGGAGAG 59 4879149 4879167 TCACGCTGAAGGACTTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15418 FBgn0031554 FBtr0077556 2 1 1 60 2L 3621313 3621396 GATAATAGCCTGCAGACAGC 58 3621272 3621290 ATATCGCAACTGGTGACCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15408 FBgn0031523 FBtr0077587 2 1 1 94 2L 3334373 3334394 CATGTCCATGGACATCTTTCTG 59 3334449 3334535 CCTTGGCACGAATCTTGAC 59 NA Drosophila melanogaster 61 eys FBgn0031414 FBtr0114370 3 1 1 80 2L 2353448 2353541 TGGAGCAACCTTTACTTGC 58 2353585 2353603 AAGGAGTCACAGGGATTCG 59 NA Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085 1 1 2 109 2L 462385 462403 ATGGTTCCGAGAGTGATCC 58 462039 462057 GATGGATCGGAGTTCTCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4213 FBgn0031251 FBtr0078093 1 1 1 80 2L 398852 399857 CAAACTAAAGGACCTTATTCTGGAG 59 398796 398814 TCCAGATGGCTGTTAAGGG 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121,FBtr0078122 1 3 3 81 2L 185013 185031 CAGTCTTCGGGCAATTGTG 59 185074 185163 TTGAAGAGTTGCTGGTTACTG 58 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 3 2 6 98 2L 15706 17066 TTGCTTATCGTAAGACGGCA 59 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0078164 2 1 4 197 2L 33262 33854 AACTTGCAAGCTCGAAAGC 59 33083 33101 CTCTTGCCAACGACTTAGC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089428 2 1 10 93 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111109 111917 GAAATCGAAACCTGGTCACC 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 2 5 5 110 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155897 155915 ATTCTTGTCCCTTACGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 2 3 3 83 2L 215083 215104 GTGATCAATAAACAGACAGGCA 59 214930 215039 GTTCTCCGTAAGCCATTGC 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 3 4 5 118 2L 344388 344406 AAAGATTAAGATCGCCGGC 58 344486 344571 GCGGAGAAAGACAATTAAGAC 57 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 1 2 5 154 2L 836168 836560 TCTACAATGCAGTGGCTCC 59 836032 836051 TGATACTGCGGGAACTTGAG 59 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 3 3 3 81 2L 1180919 1181008 GAAATACGATACTCCCGATGTG 58 1181049 1181068 GTAGAGTCCTGTAACGTGGT 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 3 6 6 127 2L 1500033 1500122 CCACTCAAGTCAACATATCCAG 58 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 2 5 6 196 2L 1726645 1727654 AAGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301067 3 1 3 164 2L 2017843 2026777 CGTCCTCAGGAATCTCCTC 59 2026905 2026923 GTTGGTAGTGATGCTGCAG 58 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 2 3 3 80 2L 2040347 2040429 GTTCACAGTGCTGATTACACC 59 2040471 2040489 AGCATGGCATCTTTACGGA 59 NA Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 2 2 2 80 2L 2579791 2579874 CCTGAAGCTCTATAGGAACGA 58 2579731 2579750 TTCTCGAAGTACTTGTTGCC 58 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 1 4 4 80 2L 3780518 3780538 CCCTATTCCTGTGATATCTGC 57 3780577 3781922 CTCCTTGGAGTGAATATACCTG 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 3 5 6 83 2L 4192685 4192706 GGAACCTTAAAGACAACAACCA 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089268 2 1 6 80 2L 4304833 4305359 GTAATCATGGATAAGGCGGC 59 4305400 4305420 TATGGTCAGCCTCTCATTCAC 59 NA Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 3 2 2 86 2L 4434740 4434858 GGAATGCTGTTTACGTGTG 57 4434907 4434926 ATCTGGATAATTGGCATCCC 57 NA Nonspecific Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 4 5 112 2L 4473964 4474340 TAGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983 3 1 2 60 2L 5039986 5040004 TATCTGAGCGAGGTGATCG 58 5040120 5040138 ACATCTCCAGCTGATTCAC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 3 6 6 61 2L 5042504 5042522 CAACGTGGAGTTCGATCAC 59 5041807 5041825 AGTCGAATTCCTGAGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 3 3 3 101 2L 5307902 5308028 GGCTTCTAACTTGCATCCG 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 3 2 2 84 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892688 5892710 CTAGACTGAACGCTTATAAAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0091497 2 1 2 80 2L 6301615 6301633 GTCATCGTCGAGAAACTGG 58 6301675 6303077 TTCGGTTAGATCATTCAGCAC 58 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 1 2 2 86 2L 6640924 6645980 GGAAGCAAGTATACCTCGTG 58 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 3 3 6 82 2L 6688732 6688809 GCATCAACGAGATTGGTTCC 59 6688669 6688687 GGATCTGTCTAGGCAGCTG 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 3 5 5 133 2L 6924281 6924301 GTTATCATGTACGACCAGGAG 58 6924396 6924698 TTCTTGATTTCGACCTGCT 57 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 2 2 3 105 2L 7041151 7051377 ACTATTTCCTTCTATGCGGC 57 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612 3 1 3 147 2L 7132842 7132860 ATCAATTGCAGTTGCTGGC 59 7118913 7132735 GCAGCACTTACATCATTATCCTC 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 1 4 4 80 2L 7729222 7729243 GATGAGTTGCAACAATAGTTGG 58 7729109 7729185 GGATCAACTCTATAGTCATCGAC 58 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 3 2 2 135 2L 7800619 7800639 ACTATTGGAGATAGAGGCCCT 59 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 3 2 3 82 2L 7986007 7986025 AAGCTCGACTTCAAGTCGA 59 7986071 7986152 GGATACGTGGTAGGGTTCG 59 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079536,FBtr0079539,FBtr0079537,FBtr0079538 3 4 4 63 2L 8036255 8036274 CATCAATGGAAACGAGAGCA 58 8036359 8036377 TTTAGCGGGAGTATGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079574 2 1 9 99 2L 8103494 8105702 GTCAAGATGGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300334 1 1 4 148 2L 8174686 8176578 GATTAAGCCACGGTTGGTG 59 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 3 2 2 66 2L 8210589 8210607 GAACAATCTCGACTGCCAG 58 8210465 8210560 TGACTTCTCCTCATCCTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 lmg FBgn0250903 FBtr0112743,FBtr0079695 1 2 2 60 2L 8528094 8528112 GCAACCGTTGAACAAACAG 58 8528052 8528071 TTAATGCACGTTGAACTTCC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0079691 3 1 3 99 2L 8663099 8663117 CGACAACTTCGGAACACTG 59 8663241 8665454 GTTTACAGCCTTCTTGACGC 59 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0112846 2 1 4 143 2L 8690241 8698856 CATTATGGAATCGGAGAGCC 58 8690117 8690135 CTCTGGTTGCTACTGTTGC 58 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 1 4 4 80 2L 8688964 8688983 AGGATGTGGGTATCGATGAC 59 8688840 8688923 CATTAAGACCCTTGGCATTGG 59 NA Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 3 2 2 101 2L 9460742 9460944 AAGGTCTTGAGGCAATCCC 59 9461009 9461027 CACTATCAGGCCCTTGGTC 59 NA Drosophila melanogaster 61 CG31712 FBgn0051712 FBtr0079896 1 1 1 134 2L 9937658 9937678 CGCTTTAAGAAGCTGGATGAG 59 9937397 9937415 TACCAGCATCTCTATGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 1 1 1 71 2L 10050596 10050616 CACACTTCAGGAATATAGGCT 57 10050708 10050726 GGCTTAAACATGTGAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 4 7 80 2L 10257441 10257462 CACATGTAAACAATCCTCTCCA 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 2 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512940 GCGATAAACAGATAACGGGAG 59 NA Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 1 1 1 60 2L 10737746 10737764 TTCGCATCTAATCTCACCC 57 10737896 10737914 GTAGCTCTGTTTCAGCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 3 8 10 80 2L 10806031 10806052 AGCTACAGAAGGATCAAATCCT 59 10805731 10805990 CCTGCACATATGTCTTCGG 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 3 5 5 80 2L 10992855 10992876 CTTGGTTACATCAGTGAATCCC 59 10992916 10993007 GCGCTGTACTTTACTGAAGC 59 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 2 2 2 80 2L 11008776 11008796 GTGTATGCGAAATGGTAACGT 59 11008838 11008921 GCGATGTCCAGCTTATCCT 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 1 4 4 117 2L 12352776 12358051 CCAAATCGCAACCAAAGTC 57 12358129 12358150 CCACGAACATCTTGATATTGTC 57 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 2 1 2 92 2L 12678863 12678881 ACACAAACACAGCAATCGG 59 12678937 12680790 CATGTGCCGCATAAATGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 2 2 17 92 2L 12736801 12737964 GCAAGTATTCCGGGTTCTG 58 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 1 2 17 92 2L 12737606 12737964 GTGTGCATTCGAGGTTCTG 59 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG18507 FBgn0028527 FBtr0080528,FBtr0080527 2 2 2 71 2L 13668754 13668772 CATATTCCGTCCGGAACTG 58 13668864 13668883 ACATAGTCCTCCACAGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0080535 1 1 3 98 2L 13785507 13785800 TTTGCTTCCACTCAGATCG 57 13785862 13785880 AGACGAGAACCACGTAGAC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 2 3 9 111 2L 15261795 15261814 AATCTACGACGAATCCTCGA 58 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 1 3 9 110 2L 15261795 15261813 ATCTACGACGAATCCTCGA 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 2 5 5 84 2L 15759354 15759428 TATTCGCCGAAGACTGGTG 59 15759288 15759306 AGGCTCCACGAATGAACTC 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080940,FBtr0080942 1 2 3 144 2L 16724973 16727010 TAACAACGAATACATCCAGTCG 58 16724786 16724870 GTATTGCACCTGGAAGTTGAC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 3 10 16 118 2L 16779837 16780560 AACACAAAGGTGTTCTTCCG 59 16780641 16780659 TTACGGGACAGGTAACCAC 59 NA Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 3 2 2 101 2L 17479236 17479257 TTGTATTGAGTATGCACAGGGA 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805,FBtr0081052,FBtr0081051 1 4 5 166 2L 18384741 18384759 ACTACCAGGTGCGAATCAG 59 18384889 18387300 CTTGATTGATTTGCCGCCA 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 2 2 4 176 2L 18475268 18475345 GAAAGATGAGGTACCATTGCTG 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081209 3 1 3 288 2L 19437829 19438010 GAGAGTACCCACCATGCTG 59 19436952 19437040 GTACCGCTTAATCAGATCACG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0299519 3 1 6 121 2L 19515018 19515037 CAAGATCACCTACAACTGCG 59 19514845 19514934 CATTTGCGCTATCCGAGAC 59 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173 3 1 2 104 2L 19970592 19970610 CACACTCAGTGTCAAGGTC 58 19970448 19970524 GGCTCAACATTATCCTGGG 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081328 3 1 3 147 2L 20062056 20062161 TTCTGTTGATCTCAACAACGAC 59 20062269 20062287 GGTAAGTTCGCAGTTTGCC 59 NA Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 2 2 2 80 2L 20432660 20432678 GTCACCGAGGAGATACTCC 58 20432720 20441067 GGTGTGAAGAATTTGCATGTG 58 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 1 2 2 146 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813551 20813569 CGAGTTCTCCTTTCAGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 3 9 9 90 2L 20877211 20877229 CGCTTTGATCAAGTTCTGC 57 20877074 20877157 ATACTGGGTACTCAGTCCC 57 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 3 6 9 96 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882380 20882400 CTGAGTATGTTCTTCACGTCG 58 NA Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0110895 1 1 2 80 2L 21206665 21206686 CTCACTCACTTTCTTCTGATCG 58 21206727 21206817 TGTGAAGATGCTACCCACC 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081483 1 1 3 80 2L 21278367 21278386 GGCTACTCAGGATTTCTTCG 58 21278427 21279901 GGAACTCCACTGAAGTTTCTC 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 2 13 13 80 2L 21289506 21289525 TTTATACAGCCCAGTCTTGG 57 21289388 21289464 TGTGGTTGGAATCAAGTCTG 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111247,FBtr0111245 1 2 6 130 2L 22741818 22741957 AAATTGGTTGAGACGGCAG 58 22742101 22742174 TCAATGTATTCACCCGCCA 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111300 3 2 5 99 2R 18622 18693 CCTCACAGATATGCATTAAGC 57 18754 18772 TCTGATTCCTCAAAGCAGC 57 NA Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113,FBtr0111114 2 2 2 60 2R 487558 487580 CGACTGCTATCTTATGATTCTCC 58 494274 494294 AATTACGTAAAGCACCACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 3 2 3 119 2R 1182465 1182484 TGATGAGTCTTACACCAGCC 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 3 2 2 113 2R 1394204 1394273 ATTGAGAATCCTTAGGAACGC 58 1394111 1394131 GGTGGTTCTAATTTCTGACCC 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 3 3 3 84 2R 1864960 1865499 CCTGCATGTTATTCTTATGTCG 57 1864897 1864915 GGGTACTTCCAATACGGGA 58 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 2 4 4 83 2R 1925631 1925650 GAGATGGGCTTCAAACTCTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301420 2 1 7 119 2R 2616573 2617824 CGGCTTATAGATGAAATAGATGACG 59 2616478 2616496 TGGACAGCATTGGAATGGT 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131 3 1 5 119 2R 2641935 2642219 TGAAGCCCATATCCAAGGT 58 2642302 2642320 TGTTGACCGAATTGCTCAC 58 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577 3 1 6 169 2R 2822602 2822727 CAACACAGACTTCGAATGCA 59 2822452 2822470 TTGGAACGTGTAGACGGTC 59 NA Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 2 2 2 87 2R 2864776 2864795 CCATGCTCGAAATACACCAG 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 2 1 1 164 2R 2895354 2895372 CTCATCTTCGTGGTGTCCT 59 2895563 2895581 ATTGGACATATCGCCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111075 2 1 59 80 2R 3250876 3250897 CACATAGACATAACCGACTGGA 59 3249353 3250839 CAATACCAGGTACTTTCCATCAG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111086 2 2 59 80 2R 3247432 3247450 ACTCGAGTTCCCAAGATGG 59 3236471 3247391 CTTGTACCATCTAAAGAAGGGC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 2 7 8 103 2R 3293619 3293712 ATATGACTTCAAGCCAGCG 58 3287509 3293553 CGGAACTTTCAGAATTTGGC 58 NA Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 1 2 2 104 2R 3348838 3348856 GGGAATCGTTGAGATTGGC 59 3348697 3348772 AGACCATTGTTCTCCATTTGG 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 2 5 5 80 2R 3371066 3371168 TGGACTTTATGTGGGATATCG 57 3371006 3371024 AAGTGCGATCTTTCTCGTC 58 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 1 3 3 186 2R 3414692 3414710 CAACGTGGACATCACAGTG 59 3414457 3414475 CAGACTCCTGGAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 3 1 1 92 2R 3812103 3812121 TTTGCCAAGTAGTCACTGG 57 3811964 3811982 CCTTCTCCATGAATTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 1 2 2 118 2R 3850891 3850967 GAATATAGACCACGCGGTC 57 3851049 3851067 TAGGGATCAATCGGAGGTC 58 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787 1 1 2 80 2R 4468412 4468544 TATGCAAGGGAATAACAACCG 58 4468352 4468372 TCCATGGGATAACCAAGTCTG 59 NA Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 1 2 2 80 2R 4496832 4496851 GGTACTTTGAGAGGATGGAC 57 4496893 4496972 TCTCATTGGAAATCTTGGCT 57 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301193 2 1 3 129 2R 4898912 4899026 TTTCCCGAATGATACCGCA 59 4898801 4898820 CAACAAGACCAGATCATGCC 59 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 1 3 3 104 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088620 3 1 2 181 2R 5051972 5052051 GAAACAAAGAGAATTGAGGAGC 58 5051756 5051774 ATGAGATACTGAAGGCCGT 58 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611 3 2 3 154 2R 5078908 5078926 GATCAAGGCACAGTCAACG 59 5076717 5078791 CATCGTTAACTGCGAATCGA 58 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 3 3 3 117 2R 5150100 5150177 ACAGGATGTCGACAAGACAG 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299917,FBtr0299916 2 5 5 80 2R 5397497 5397732 ATGGACTATCCAAGAACCCG 59 5397775 5397793 AATGGGTATGAACTCGCGA 59 NA Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 1 1 1 129 2R 5704951 5704969 AAGTGCTTCTATGTGGGCA 59 5705193 5705211 ACGTCACGTAGTGTACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 1 2 2 80 2R 6146885 6146903 AACGCGGATATGGATACGA 58 6146945 6147029 AGTAGCGATCTCTGGATAACC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 2 2 26 117 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408768 6419548 AGTCGTACTTCAGGTCTTGG 59 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 3 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 3 2 5 172 2R 7198803 7198823 GTGATAAATCCGATGCGTAGC 59 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 2 2 4 129 2R 7532454 7532917 TCCCAAACATTCCTAGGCG 59 7532260 7532362 ATTTGCATACCTGTGCACAG 59 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088073 3 1 2 86 2R 7556171 7556775 CTAACCCGAGTAGGTGACG 59 7556824 7556843 AATTGTGTCCAAACTGGTCG 59 NA Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 1 2 2 200 2R 8041073 8041157 CTCTGGTTAAGCACACCGA 59 8041498 8041516 TCTCCGTCTCGTAGGAGAC 59 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 3 2 2 89 2R 8087084 8087348 CTGTGTTCAGAGATGTTGAGC 59 8087015 8087033 CTTTCAGGACGTTGAAGCG 59 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087947 2 1 2 95 2R 8378198 8378839 TACGAAAGCCTACGCTATCTC 59 8378123 8378141 CGTCAGGATGAATATGGCG 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 2 2 2 84 2R 8575267 8575285 GTAGCTTTACAGAGGGCAG 57 8575391 8575409 GAGTAGCGAAATCCCAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 3 2 2 104 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459374 9459395 AGTTCCTAATGCGATTATCAGC 58 NA Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087648,FBtr0087647 3 2 2 135 2R 9709042 9711297 GATGAGATCGAGAATCTCAAGC 58 9708865 9708948 CAATTTGGCTCACATAGTCCT 58 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 2 3 5 74 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846589 9846712 ATATTCAGGGATCGTCCGG 58 NA DesignRelaxed Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 2 3 8 80 2R 10064183 10065370 CCTCGACAAGAACTGTGAC 58 10065414 10065432 TCCTCGTTATCCTCCAGTC 57 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 2 3 5 162 2R 10797861 10797879 CGCAAGTCTCCCTATGGAG 59 10793447 10797735 CAATGCAGGAATCTGCCAC 59 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087403,FBtr0087402 1 2 2 104 2R 11100179 11100197 TAAATTCTGCGAGTGGCTG 58 11100042 11100114 GTCACATCCGAATAAATTCCCA 58 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 3 3 3 81 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204763 11204782 CTCGTATTCCTGAGTTTGCC 58 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777 3 1 5 138 2R 11447100 11447118 TATACCGCCGTATTTGGTG 57 11447219 11449330 TACATTACGATCATGTCGGC 58 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 2 3 3 60 2R 11589069 11589143 CTCAAGCCTGTGGTACTCC 59 11589027 11589047 TAATCAAAGAGTGTACGGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 2 4 7 92 2R 11652754 11660560 ATAATGTGTACCGAGGTGC 57 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 1 2 5 80 2R 11773649 11773669 AACTGACAATCAGATCCACAC 58 11773147 11773608 TTGTTGTTTAGGCGTAGTCG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 1 2 13 80 2R 11850589 11850610 GCAATTTGTTTGTGTACAGCAC 59 11848682 11850552 GAGAATATGTGTCTTTGATGCCC 59 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220 1 1 3 104 2R 12002280 12002298 TAAAGCCGAAAGAAGCTGC 58 12002366 12002871 CTTGGGCATAGTTCTCCCT 58 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 2 2 5 80 2R 12020077 12020098 GACCTTCCTTCATCTATCTAGG 57 12020138 12020350 CAAACTTGTACGAGATGTCG 57 NA Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 2 2 2 84 2R 12153287 12153306 AAACTCTATCAGGATGCCGT 58 12153351 12153431 GCATTACAACTGTCAGTTTCG 58 NA Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299971 3 1 2 60 2R 12179190 12179208 TACGAATCCCGTGGAAGTG 59 12179287 12179305 TCCCTTCTTTAGCAGGGTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 1 2 5 114 2R 12220626 12220644 CTGGACACCTATGTGGAGC 59 12214657 12220548 GTAGTTCGGTGTTGTTGGC 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175 2 1 5 102 2R 12214656 12217750 ATCTCAAGGCCGAACTACC 59 12214572 12214590 TTGGAGATAATGTCGGCGA 58 NA Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 2 1 1 77 2R 12386692 12386710 AAGCACGAGGAGTACAAGG 59 12386467 12386487 CTGACGGTAGTATTCCCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 3 1 1 78 2R 12386692 12386710 AAGCACGAGGAGTACAAGG 59 12386466 12386485 TCTGACGGTAGTATTCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 1 2 5 80 2R 12442693 12442712 CTGGCGATATTGTTGTGCTC 59 12442749 12443124 CCATCATTAGAGGTAGTTGTTTCTG 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 1 2 2 80 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993671 12993689 AGATCGCATAGCTTGAGGG 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 1 2 4 80 2R 13619710 13619730 TAAGTACATCGACATGTTCCC 57 13619769 13619859 CGGATATAGTCCAATAGTTCGT 57 NA Nonspecific Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 1 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614 2 1 5 217 2R 13745119 13745139 CCAACAGAATCAATCCTACCG 58 13746778 13746796 TATCGTGATCCAGTTGCAC 57 NA DesignNoJunction Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614 2 1 3 108 2R 14007894 14007981 AACAAGAAACCAAAGAAGAGGG 59 14007807 14007825 TGCTATTCTCCTCAGCTGC 59 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 3 6 6 131 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175122 14175141 CAATATTCCACTCGTCCTCG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 2 3 12 81 2R 15064177 15064196 GATTAGTCACAAGCAGTGCC 59 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 3 11 12 194 2R 15061856 15062087 CCGAATGCATTTAAGGTCGAG 59 15062241 15062261 GCCATTACCTGAATCGATGAG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 1 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 3 3 3 80 2R 15315052 15315070 CCTGATCCAAATGTCACGG 58 15315113 15315190 AAGGCAAACCTTGGTTATGG 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 1 2 6 121 2R 15461674 15461692 ACATTTATGCCGGATGCTG 58 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 2 2 6 122 2R 15461675 15461693 GACATTTATGCCGGATGCT 58 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343,FBtr0086342 3 2 2 73 2R 15671503 15671521 GGGCTACATTCGCATTGAC 59 15671380 15671398 CGAACTGTCTATGTTGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 3 2 4 156 2R 16361410 16361431 CAGGTAAATGTTATGATGGACG 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 2 4 4 90 2R 16557769 16557787 CGATAAAGTTGAGCTGCCG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 3 3 3 138 2R 17181653 17181740 AGTCCACTCTGGGTATGGA 59 17181842 17181860 AGAGTAACAGGCTTTGGCT 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 3 8 8 80 2R 17194842 17194918 GTCTTAAAGGAGGATCAGCA 57 17194960 17194979 CATTGTATTGGAAACGCTGG 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 1 5 5 96 2R 17204979 17204997 CTGTTGACGGAGATTTCGC 59 17205055 17205131 GGCGATCAGAAATGTAATCCA 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 2 4 5 176 2R 17202259 17202341 TATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 1 2 9 94 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399673 17399907 AAGTACTTGACGTAGCCCTC 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 2 2 2 87 2R 17424145 17424164 CATATCCGAGAGTCCTTGGA 58 17424022 17424098 CAGGATGAATCGATGATTTACG 57 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951 2 1 2 81 2R 17423682 17423766 GTCGGTGGAGTATAAAGTTCAC 58 17423622 17423642 GTGGAGTCTTTCAATCTTCGG 59 NA Drosophila melanogaster 61 Tim10 FBgn0027360 FBtr0071676,FBtr0071677 1 2 2 93 2R 17578191 17578209 TATAACCGCATGACGAACG 58 17577953 17577971 GATCGATGCACACCATCTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273318 3 4 5 168 2R 18595818 18595837 CCATCCACTTTGTGGAAACC 59 18595968 18596202 TCGTTATCTTCGGCCAGTG 59 NA Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072025 3 1 2 93 2R 19300649 19302031 ATCAACCAAGATGCAAGGAG 58 19300575 19300593 CCAGGAAGCGATTGTTCAC 59 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0072024 2 1 2 142 2R 19310070 19310159 TATAATCATCACCGCCATGGA 59 19309785 19309966 GCAGCAGCGTATCATTCAG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 3 2 2 95 2R 19873907 19874869 CAATTCCCAGATCGTATACGC 59 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 3 1 2 93 2R 19954749 19954767 AAATCTACGCAGTGGGAGG 59 19953825 19954694 TAAGCCCAGATTCATTCTGCT 59 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 3 5 5 81 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770667 AAGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375 3 1 3 162 2R 20853665 20854677 ACGATATGGAACCAGAGTCC 59 20853458 20853477 ATTTCCCAAACTTGATCCCG 58 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 2 4 4 178 2R 20981954 20981974 TGGTAAGGAGTTTGGAAAGGA 59 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 3 5 9 120 3L 135828 135970 AGTATCTGACAAACGGCCA 59 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539 1 1 2 86 3L 152265 152354 GGAGTATCTTTAAACGGTCCAG 58 152200 152219 TAGACTCTTCGGCTTGTGTC 59 NA Drosophila melanogaster 61 Mkp FBgn0083992 FBtr0110977 3 1 2 70 3L 183759 183778 CGATCGTTGTTACTTTCTGC 57 183653 183671 TAAACATTCGAGCTGCAGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0302310 3 1 5 136 3L 1635188 1635206 TTGTCGTGGGCATTATTGC 59 1632437 1633715 CTATGAGTCCAAGTTTATCTCACAC 59 NA InUTR Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 1 5 5 98 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743973 1743991 TTGAGCAGAACAGGATCCC 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857 3 1 3 127 3L 1945525 1945662 TCAAAGTTGCATCAGGGAC 58 1945361 1945379 AACGCCTTCAATCTGACAG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 2 5 5 82 3L 3310690 3310776 CATTCCTGTCTGTGAAGATGTC 59 3310818 3310837 CAAAGCACCCAAGACTTCTG 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 1 5 5 80 3L 3310691 3310776 ATTCCTGTCTGTGAAGATGTC 57 3310818 3310836 AAAGCACCCAAGACTTCTG 58 NA Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 2 1 1 60 3L 3318705 3318726 GACACTATGGATTGGATGTAGC 58 3318564 3318582 AATATGGCGGCATTCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073075 3 1 2 156 3L 3375160 3375238 GAAACTACGTCCATTATTGCCA 59 3375354 3375373 TATGATGCCTCGAGGAAGTG 59 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 1 2 2 88 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504795 3504897 CAATGGGTAGCGATGACAC 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303 3 1 6 80 3L 4095137 4095210 CCATAAATAGGCTGAATCGCA 58 4095077 4095098 CTAACTCCTTCACCAAACACAG 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267 1 1 6 173 3L 4132207 4134467 GACTAATCCAGAAGCGTCCA 59 4132053 4132071 GTACGGATCTCCTCGATGC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073269 1 1 6 80 3L 4131171 4131189 GTTCAGAGCGTGAACTTGC 59 4129780 4131130 CAACGCTATCTTCATCTTGTCG 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 2 6 6 205 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419168 4419442 GATAAACGGACATGCAGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 3 4 6 239 3L 4418264 4418283 CAGGCGATGTAATTGAGGTC 58 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 2 1 1 85 3L 4471709 4471730 CGCCGGTCTAAGATATTATTCG 59 4471883 4471902 TGTAGTTGTAGCCAGATTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301097 3 1 4 89 3L 4563894 4578764 AAATACGTAGACTTGCGGAC 58 4578816 4578834 TTATCACAAGAGCCACGGA 58 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301096 2 1 4 80 3L 4564539 4577926 ACGTAGACTTGATACACAAGC 58 4578775 4578793 CATGTTGATGCCTTATCGC 57 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301098 1 1 4 80 3L 4568936 4577922 GGTTTCGATCGGGATACAC 58 4578773 4578791 TGTTGATGCCTTATCGCTG 58 NA Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 3 1 1 115 3L 4622736 4622754 ATGTGGATCGCATTCTGGT 59 4623310 4623328 CTTAGCCAGCAAACAATGC 58 NA DesignNoJunction Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 3 3 3 95 3L 5338823 5338841 ACTTATCCGGATTGGGTGC 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 2 10 10 114 3L 5543936 5543954 TACTGGCGTTTCTTGTGTC 58 5538158 5538176 AACTTAGCAGAGTAGACGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 3 2 2 80 3L 5556487 5556602 CGTTCATAAGGTTCCCGTG 58 5556425 5556444 ATGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 2 2 2 60 3L 5773857 5773940 CCATGTTGTCAATATCAGGTGG 59 5773961 5773979 CTGTCAGTGGCAGTTTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 1 1 1 60 3L 6027463 6027484 GAATACATGGGTACTAACTGCT 57 6027372 6027390 GTAGATGGTCACGGAAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 2 3 3 80 3L 6190639 6190719 GCATCAGATGATACAGAAGATTCTG 59 6190756 6190775 AATTGCTCCACAAATCGACG 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 2 6 9 124 3L 7157973 7158040 GTTTGCTACAGACACATGCT 58 7157868 7157886 ATGGTGGCATAATACCGCT 59 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 1 2 2 80 3L 8430189 8430208 ACGATGTGGAAGGTAATGTC 57 8430062 8430149 CTAGATTACCTCTTTGGTTCGT 57 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 2 2 2 81 3L 8430189 8430208 ACGATGTGGAAGGTAATGTC 57 8430061 8430148 CCTAGATTACCTCTTTGGTTCG 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290105 1 1 5 80 3L 8927557 8927575 ATGGCATGATCATGAGTGC 58 8927399 8927514 GGTTACAAGCCTGGTAAACG 59 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 3 3 3 80 3L 8977958 8977978 GCTTCAACTCAGAAATCTCGA 58 8977753 8977917 TTTGGAAGCTCGATTCTGAG 58 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076528 3 3 5 81 3L 9080821 9080842 CTCTAGTTATGATCGCACTGAC 58 9080881 9080962 GGATTGACGGTTGTCATTAGAG 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 3 3 3 123 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624406 ATAGTATCGATTCGCCTTGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 1 4 12 113 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 3 1 1 77 3L 10872395 10872413 TGAGACTTTGTTGGCTTCG 58 10872504 10872526 GTGAAACCTAGTATAGAGCAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0076189 2 1 3 80 3L 11176787 11176805 ACCTGCATTTATATGGCGC 58 11175735 11176743 CTCCTGATGCTTGACAACC 58 NA Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 1 2 2 81 3L 11513444 11513462 CAGTCAATTCACAGCGGAG 58 11513300 11513400 GAGCACAACATATCTGGCTC 58 NA Nonspecific Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058 1 1 4 130 3L 11994180 11995693 TGAAATGGACAATGCCCTC 58 11994068 11994086 CACCACTTTCCGTATGGTG 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 1 5 5 193 3L 12021961 12048294 GATCTCCAGTCCATCCGAC 59 12020252 12021805 CCATCAACATCTTTCAGCGA 58 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 1 2 2 80 3L 12763432 12763506 AGTGCATTACAGCAAACCC 58 12763370 12763389 CAAATCCTCGTTACGCTGAC 59 NA Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 1 1 1 68 3L 12768576 12768594 CAGCACTGAAGAATTGGGC 59 12768466 12768486 AGTCTGGTGAAGTTTAGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 1 3 3 80 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127,FBtr0290126 3 3 4 82 3L 13865947 13866029 ATCATCAGGAGGTTGCTCG 59 13865883 13865903 TGCTTCGACAACTAAGAAGGT 59 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 1 4 4 83 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901999 13902017 AACACTTCTCGCAGAGTCC 59 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075775 3 1 3 139 3L 14058248 14058697 GGAGTCATCGGCTTTATCTC 58 14058799 14058817 ATCCAGGAACTCCTTCACC 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100042,FBtr0100039,FBtr0100040 3 3 6 81 3L 14206286 14223279 CATGACTACGATTATAGGCTGG 58 14223318 14223339 TCCGATCCTCAGCTATATTCTG 59 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 3 3 4 81 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 1 2 6 140 3L 16108921 16110654 GAGTCCATCGTCTATGACCA 58 16110757 16110775 GTAATCTGCGGCAGTTGTG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 2 2 4 86 3L 16785598 16785616 AGAATGCCGGATTACCCTG 59 16784780 16785549 GAACAATCACACGTGATCGT 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 2 2 4 80 3L 17061137 17061155 ATCTAACCAATGGGCAGCT 59 17060461 17061097 CCTGATAGTTGTTCATCACTGAC 59 NA Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 2 1 1 130 3L 17799152 17799170 TAAAGATGCCCAAGCTGGA 59 17798916 17798934 TTTCTCTAGGGCTTGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 3 1 1 131 3L 17799153 17799171 CTAAAGATGCCCAAGCTGG 58 17798916 17798934 TTTCTCTAGGGCTTGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277 1 1 2 80 3L 17847798 17849754 GTACTATGGAATGCCCAGC 58 17847736 17847754 TCATTTGAGTCCTCCAGGG 58 NA Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 3 2 2 80 3L 19290536 19290626 CCATGAATTTGATCACGAGGA 58 19290666 19290686 GAGACTAGCTCCTGATTGAGG 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 2 6 6 144 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684742 19684912 GATCCTCATCGACAGAGCA 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 1 3 3 80 3L 19809756 19809833 AAGGAGATTAAGCACCTCGT 58 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074900 3 1 2 186 3L 19987827 19987918 GGATTTAAGCAAGATTGCCC 57 19988486 19988507 CGCTTGAAGTTACATCTATTGC 58 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 2 2 18 174 3L 20812560 20825954 GGAACGCGAAGAACAAGTC 59 20826088 20826110 CACCACCTTCTTAACATAGTTGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 3 3 4 117 3L 21488958 21489529 GAAGTGATTCTGTGCAGCAC 59 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089797 1 1 3 105 3L 21522001 21522068 AAGGTGACGAGCTCTACTG 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078460,FBtr0078461 2 2 2 174 3L 21687560 21687578 TATTATCCTCCCGCACCAC 59 21686810 21687422 GTATAAACATGCCTGGCGC 59 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 2 3 3 80 3L 21832003 21832172 CGACTTTATACGAATGAATGCC 58 21831944 21831964 TTCGTGACCTTTATGTTCTCG 58 NA Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 2 2 2 60 3L 22857206 22857224 GTCTTTCTGGTGCTGTTCG 59 22857247 22857266 GACTACATTAGGCCAAGACC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 2 2 2 80 3R 52168 52259 GGATTATGGAATGGACTGATGG 58 52299 52318 CATTGTCCCACAACACTGTG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 1 3 5 122 3R 454061 455858 CTAATGGACAGACTGGCCA 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 2 3 3 89 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210504 1210522 TATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 1 2 2 88 3R 1227159 1227241 TACTGGACTATGTGCACTGC 59 1227090 1227108 GAAGTCGCAATCGATACCC 58 NA DesignRelaxed Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 1 2 2 83 3R 1233858 1233876 ATACCTAGGATACGCGCTG 58 1233432 1233812 TCCATGACGGATGAACTCTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 3 2 12 94 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587156 1587375 TTACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300913,FBtr0078676 1 2 12 81 3R 1587419 1587437 CATTAGCTGGAAGAGCGAC 58 1586953 1587375 ACATACCCAGTTATGTCCGA 58 NA Drosophila melanogaster 61 Osi4 FBgn0037412 FBtr0078615 3 1 1 69 3R 2045356 2045374 ATCAAACGTGAGGACTCGT 59 2044284 2044303 GCACGTAGTTGTAGATCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081672 1 2 3 80 3R 2308892 2315363 CGATACTGAATTGGACAGAAAGTC 59 2315399 2315420 TTAATATTAATGGTGCGCAGCC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 1 6 11 80 3R 2724256 2734248 TGGTAAGTGTCAAGAACGC 58 2724194 2724214 AAGTGAAACTCCTTCTCTAGC 57 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 3 2 2 122 3R 2972595 2972674 ACTCGAAGATGAATCCGCA 59 2972491 2972510 GATATAGCGTTGAATCCGGC 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0081572 3 1 3 92 3R 3017771 3017790 TTGTTAGATGCCTTGGAGCA 59 3017845 3018271 AAATGCCGAGCTTGATGAC 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 1 3 4 88 3R 3586988 3587741 CACAAGGAAGTTGTAGGAATCC 59 3587790 3587808 CTGCTGAATCACGGAAAGC 59 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909 1 1 4 109 3R 4547271 4547350 AACCACAAGTCGGAAGAGG 59 4547421 4547441 CGATAATTGACCAAGGAGTCG 59 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 3 3 3 112 3R 4564427 4564515 CTAAATATCTGGAGGGCCGA 58 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 1 4 8 80 3R 4660661 4661007 CCATATACGGTACCCTACGA 57 4660600 4660618 GATGCTGTACTTGCTGGAG 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082118 2 1 3 148 3R 5372638 5372658 GGTGCAACGTCAATTTAAACG 59 5368637 5372529 TTGTACATCGCAATTTGGGT 58 NA Drosophila melanogaster 61 Dh FBgn0012344 FBtr0112870 2 1 2 103 3R 5466252 5469225 GCTATACTCCAATGATGAAAGCC 59 5469288 5469306 TCCAACTGCTCCTCTTTGG 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 1 4 4 80 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592836 5592909 ATCATGTTGTGCAGATGCTC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 2 5 9 80 3R 5834565 5835033 CTACGAAGGTTCAAACCGAG 58 5834504 5834523 AGTCGGTGGATATCTCAGTG 58 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 1 3 6 80 3R 5930726 5930804 TGTTTCGAATCAAGATCGCTG 59 5930666 5930685 TGAACACAAAGGGTACATGC 58 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 3 3 3 97 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595737 7595755 CAGGTGTGACGAGTAGTCC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 1 4 4 72 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646923 7646941 ATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301042 3 1 2 98 3R 7717505 7717585 TTCAAGCTTCTAACACAGAGAC 58 7717644 7717662 ATCTTGACTGGCTACAGCA 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 1 3 15 193 3R 7815047 7817808 CTCAGATAACTCCAGCAGC 57 7814462 7814480 ATTGCTGGAAGAAGATGGC 58 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 3 2 3 160 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213644 8213715 GAAGAGCGAGAAGACTTCCT 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 3 2 6 153 3R 8522011 8522183 TAGTCATGCAGGTCCTGTC 58 8522297 8522318 ATGAACAGATTGATCATGGTCG 59 NA Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 3 2 2 106 3R 8668402 8668420 AATTATCCGGAGCTGAGGC 59 8668034 8668332 GAGCCAGAGTTTGCATTCG 59 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 3 3 3 179 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795021 8795039 TGATCGAACTCGTACTCGC 59 NA Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225 1 1 3 84 3R 8832869 8832887 GAGTCATTCGCTACGACGA 59 8832932 8833263 ATATTGTGTATGGAGACCTCGT 58 NA Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 1 2 2 80 3R 8866924 8866942 TCCCTGTCATCTGTTGTCC 59 8866806 8866883 CATTGTACTCCTGACATTTGGT 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 1 4 6 134 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9203264 9203282 CTCAACCAGTTCTTCCACG 58 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 60 3R 9210262 9210281 GGAGGTTGACATTCCAATCG 59 9210393 9210412 TTGCTTGGGATCAAAGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 1 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 1 2 5 80 3R 9892808 9892826 GTGGATGGTCCAGAATGTG 58 9892869 9905081 TGACGTATGGAGTTCTTCCA 58 NA Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 3 2 2 120 3R 10399020 10399040 TTGCCAAAGATTCTTCTGGTC 58 10398848 10398938 CATAGGACGCACTTGAAGG 58 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 2 3 3 80 3R 11013236 11013254 CGGTTGAACTGAAGTTGGC 59 11013296 11013378 CCTCATCCAACAATCTCATGG 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 1 6 6 80 3R 11027854 11027872 TTCACAATGACGTTCCTGG 58 11027916 11027996 GTAAACGTCCTTGCTAGCG 59 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405 2 1 2 114 3R 11142530 11142621 GATTACGTCTTGAGCCAAGG 58 11142698 11142716 CGGACGAGTGATAGCTGAG 59 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 1 2 2 67 3R 11170641 11170659 TAAGGTCGACATAGCGGTG 59 11170527 11170545 GAATGGAGTAGGCAACGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 1 2 2 67 3R 11170641 11170659 TAAGGTCGACATAGCGGTG 59 11170527 11170545 GAATGGAGTAGGCAACGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 2 4 4 80 3R 11217397 11217416 TCCACGATGAGTCCAAATCC 59 11217456 11218027 ATCACCAAATACCTTGATCGTG 58 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240 2 1 2 151 3R 11250970 11259851 CCAGATATTGTTGGGAGGC 58 11250778 11250796 GATCTTCGACAGTGGAAGC 58 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 1 1 1 134 3R 11310033 11310052 CCCATTGTGTACGGATTGAG 58 11310217 11310235 CTGCGATTCGCTAATCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 103 3R 11622602 11623026 CTCGCTACCAATCACTCGA 59 11623093 11623111 TCTCCAAATCGGTCAGCTG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0301655 1 1 8 99 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780917 11783321 TTCAATCTTCATCTTCGCCG 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 3 4 6 80 3R 12458424 12458443 CGGAGTAGTCCATCTGATCC 59 12458486 12461281 TTCTCAGCATTCTCCTGCA 59 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 3 2 4 150 3R 13308945 13309028 TAAATGTGAATGAACCCGCA 58 13308814 13308833 TTATTCAGATCGATGCGTCC 58 NA Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 2 1 1 72 3R 13508808 13508826 TATAGCCTGACGTCATCGC 59 13508921 13508939 ACAGAACAATCGACTGAGC 57 NA DesignNoJunction Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083567,FBtr0083565,FBtr0083566,FBtr0083568 3 4 4 81 3R 14073562 14073580 ATTGCCATGAACGATCTGC 59 14073621 14073711 GAATCTCATAGTAGAACACCGAG 58 NA Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 1 3 3 114 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 1 2 2 80 3R 14234389 14234409 AACCTCAATCTGGACAAATCC 58 14234151 14234350 CTCGTAGATGAATTGATTGAGC 57 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 3 3 3 88 3R 15480633 15480718 GATTGGGAATGATTTACGCCA 59 15480565 15480583 AATGGGCGAGTTTGTTTCC 59 NA Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 3 2 2 80 3R 15869772 15869849 TATACACGGAGCGATTTCCC 59 15869891 15869910 TCACCATCAAGGGTATCGAG 59 NA Nonspecific Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 2 8 8 80 3R 16148856 16148948 CATTAAGCAACTTGCTTTGGC 59 16148990 16149008 TGGCTGATCTCATTCAGCT 58 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 3 4 4 127 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450606 16450774 GGTGGAGAAACTTTGTGCG 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 3 4 4 80 3R 16883558 16883578 CCATTATTGGATCCGACATGC 59 16883426 16883518 ACAAAGGCACTACTTTGTTGG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 1 5 16 163 3R 17004778 17004798 TTATGAACTCCATGAAGGTGG 57 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 2 2 6 105 3R 17643798 17643882 CGGTTATCGTTTGAAGCAC 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 3 2 6 106 3R 17643799 17643883 TCGGTTATCGTTTGAAGCA 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264 2 1 2 129 3R 17856451 17856545 TTGTCATATGCTGGTATGCC 58 17856341 17856359 CTAATCCGGGTGAAACACC 58 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 1 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0084303 3 1 2 119 3R 18520902 18521216 GGCATCACCTTTATAGCGA 57 18521299 18521317 GCTATCCGATCCATTGACG 58 NA Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 3 2 2 162 3R 18955121 18958731 CAAGTCAGATTCGTCGATCAG 59 18954979 18954997 GATCACTTCGCTGTAGACG 58 NA Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 3 2 2 103 3R 18981603 18981621 CCGGAGATCTACAAGTCGA 58 18980677 18981536 TCCATTGAGCAAGGTTCCA 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 3 1 1 73 3R 19364211 19364229 TACGTCACATACGAGTGCC 59 19364096 19364114 AGCGTCAAAGAATTGGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 1 3 3 83 3R 19691341 19691359 TCCCATACTGGCTGAAGAC 58 19688928 19691295 CCATTGTAGCCGAGTATCAC 58 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 1 2 2 107 3R 19760641 19760755 TAAGCGCTATTTGATGCCG 58 19760825 19760844 ACGTGCACAGTATTCAAACG 59 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666 3 2 3 81 3R 20464514 20464535 ATTGTGTCCTACACCAGTAGTC 59 20464387 20464477 CATTGTCCACGAGTATCTTAAGAG 59 NA Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 2 1 2 126 3R 20483308 20483328 TATAGTTCCGCTACCGAAACC 59 20484125 20484232 TATCGGCTTTATATTGCCGGT 59 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 1 3 3 80 3R 20699676 20699836 GGATGCTAAATACGTATGGGT 57 20699616 20699636 AAGTTGTCCAGTGGAATAAGG 58 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662 3 2 3 105 3R 20869026 20869044 CCGGATTCTGATGAGTCCC 59 20868395 20868958 GTAAACAGGCTTATGGTCGC 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 2 3 3 62 3R 20877260 20877278 CTACAATTGCCTGAGTCCG 58 20878228 20878248 CGAAATCCCTTAAAGCTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558 2 1 2 99 3R 20883616 20885942 CAGTGATGAATGTCACAGATCTC 59 20886001 20886019 TCGACCAAACTGTTTGTGC 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 2 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 3 2 2 154 3R 20954240 20954258 GAAACAACGGAAGAAACGC 58 20954375 20954465 TCTTGAGCATCCTTTACTGC 58 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 2 2 2 136 3R 21108537 21108622 GAAATTCTACGCTGCCCAC 59 21108720 21108740 GATTCCTATAGCAGGCATCCT 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 1 5 6 87 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 3 5 5 61 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451841 21451860 TTATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 3 3 5 199 3R 21507901 21507920 CATGATCAGTGCCAGTATCG 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 3 1 1 60 3R 22825483 22825501 GAGTTGCAACTAGGACGGA 59 22825586 22825604 TCAGACATATCCATGCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 2 12 12 160 3R 22891749 22891834 ATCGAAGAGTGCGAAGGAG 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 3 3 3 83 3R 23081101 23081182 GCATTATGCCTGTTAACATCAC 58 23081226 23081244 CAGGCACTTGTATGGTGAG 58 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0112583 3 1 3 84 3R 23876021 23901409 CAAGCAGGAACAATTCCAC 57 23901457 23901475 GAATGGTGTGAATGCTTCG 57 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 2 2 3 131 3R 24027913 24027931 GATCTGAGTGCCGAAATCG 58 24052503 24060799 CTCCGCTTTCTTAAAGCCA 58 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 1 6 6 65 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 3 5 6 83 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639721 24640881 GCGCTCAAACACCTTATAGC 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299753 3 1 13 80 3R 24727251 24745223 GCGATTATCTAACAGCAAAGC 58 24745265 24745283 GATGGAGAATGTCTCCGGT 58 NA Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 3 1 1 77 3R 24858163 24858184 ACCTGTCTTATATCCTAGCACC 59 24858047 24858065 AGCGTTCCATTCAGATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 2 2 10 105 3R 24962334 24962352 GTTATTCGTCCTGGTTGCC 58 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 2 4 4 166 3R 25617433 25617517 ACCGATACTTCAAGTGCCC 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085497 3 1 6 92 3R 25722868 25722888 TCTAGATGGTCATGTGATTGG 57 25722939 25723030 GAGTTTCCAAGTTTAGTTCCAG 57 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 3 5 5 82 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871274 25871292 TGGGCATCAGATACTGTCC 58 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582 2 1 3 115 3R 25960009 25960028 GTGGAAGACTTACGAAGGTC 58 25959729 25959747 TCATCTTCCAGTTGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 2 2 2 80 3R 25994096 25994174 TATTACATCCATAGGACACCCG 59 25994037 25994059 AGGATTCCAGTGACCATATAGAG 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 1 3 4 87 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 8 13 153 3R 26420665 26420683 GATTGTAGCTCGCAATCCG 59 26419562 26420549 AGTAGAGTTTCTGGTCGGTG 59 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 2 2 4 97 3R 26643846 26643864 ATAAGGGCTGGTGGAAAGG 59 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 3 3 4 81 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 2 5 5 80 3R 27426314 27426404 TACATGAGGATTCCTGATCGC 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 1 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250 1 1 4 153 3R 5377302 5377321 TATCTGCTGGTGACGAAGTG 59 5375408 5375427 GGAAACACTTGATGATCGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 1 6 7 81 4 470584 470875 AATGGAACGCGGTTAACTC 58 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300343 3 2 3 91 4 502323 502447 CTATGCGTTCCAAACGACG 59 502250 502274 GGACTTAGATACTGATCTTGTTTGG 59 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 3 4 4 80 4 714052 714070 ACCAACGATGAGGAGTACG 59 713453 714011 AACATGAGGTTGAATTTCCTCG 59 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236 3 1 4 105 4 725810 725828 CTCCAACTGCTATAGGCAC 57 725897 731558 TTTACTCCACTGTGACCCT 57 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 2 2 2 86 4 984848 984866 CTTCCCACCAGATAGTGGG 59 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301335 3 1 2 134 4 986256 992672 TCAAATCACGTAAGCTCCG 58 986140 986161 GTTGTGTATCTCGTTGTAACTG 57 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089195,FBtr0089194 2 2 3 91 4 1152207 1152334 CATATTATTCAAGGTGCCGAC 57 1152387 1152405 CAGCTAGCACATAAAGCCA 57 NA Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 1 2 2 80 4 1224346 1224364 AGCTCGTTACAGTCTACCT 57 1224406 1224999 GAATGATGGTAGCTCAGAGAC 58 NA Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 1 3 3 97 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242174 242192 TACTGATGTGGCATCTGGT 58 NA Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 3 2 2 89 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 180998 181016 TTACTGGAAGCTGAAGCCT 58 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442 2 1 4 115 X 312536 364446 GAATCTCAGGTGGCAAGTC 58 211891 211911 CTTTAGTACAGTGATTGGCGA 58 NA InUTR Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328 3 1 2 174 X 373534 373627 ACAAATCAAGTGTCTAACCCTG 58 373762 373780 TAGTACTGCTCGCATAGGG 58 NA InUTR Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 85 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398965 TAATCGCCCTCAGATAGCTC 58 NA Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929 2 1 2 80 X 477102 487692 TGTCTACGACTTATTCGATGC 58 487732 487752 CCCTCCAAATTCAAGATGTCC 59 NA Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515 3 1 2 98 X 1347844 1347917 ACAATGCTCTGATAACCCAG 57 1347977 1347996 TATAGAGAAGGGTGCAGTCC 58 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 1 3 3 93 X 1376770 1376788 TCAACATCCTCAACCTGGG 59 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 1 2 2 60 X 1795110 1795131 GTTATGACCTTTACAGGTTTGC 58 1795020 1795038 CCATGGACACAATGGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 2 2 2 94 X 2045776 2045794 TAGCGGATAATCCACCAGC 59 2045635 2045718 TTCCACCAATCTAGCCAGC 59 NA Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 1 2 2 80 X 2629127 2629219 GGATATACTGGATCCGTCGTC 59 2629067 2629086 GCGATTTCCTGGAACTTGTG 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 2 2 12 179 X 3208474 3208495 TATGTGCTCCGATCTAATGACC 59 3208635 3215085 TCTACATCGAAACTGCCCG 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 3 12 12 80 X 3228356 3228597 TCGCTTAAGTTCAAACGCA 58 3228640 3228659 TTCGGAAATCTGATTTCCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 3 4 12 122 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215083 TACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 1 3 3 68 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602943 3603881 ATTTGTTCTCTGAATTCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32789 FBgn0260484 FBtr0070600 2 1 1 60 X 3694601 3694621 GTCAAATCCGGGTAACATCAC 59 3694637 3694661 CTTGATAAGGTTGTATATCTTCGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 3 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301953 3 2 7 90 X 5277598 5277616 CAATATGTCCGGGAACGGT 59 5277667 5288094 TCATGAAATCTTTCGCACTGAC 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 3 2 2 98 X 5808426 5808621 GGCAAGAGGTACTACGGTG 59 5808346 5808364 CCACTTCTCATCGTCCAGG 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 2 4 6 124 X 6456387 6470831 ATAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0301324,FBtr0112704 3 3 6 84 X 6481124 6482105 CGCAGGAATATGAGAACGTC 58 6482152 6482170 AAATGGTGTATCAGCGCAC 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0112956 2 1 6 106 X 6702367 6702855 CATACAAGCCACGTTTGGG 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 2 4 21 81 X 6986732 6986756 GTCCTACTATAACTTTAAGATGGCG 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 3 4 5 80 X 8404727 8406393 CAATGGAAACGATCCCGAC 59 8406434 8406455 GTCGTGATGATTGAGCTTAGTG 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 2 2 6 83 X 8478889 8478907 CATCATCTACTGCTACGGC 57 8478954 8479858 GATTCCTCGAGCGAAACTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302663 2 3 6 93 X 8918736 8918754 TTGGATACCCTAGACTCCG 57 8918809 8919207 GCTCTTGACTTTCCAAATAGG 57 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 3 3 3 107 X 9048444 9048463 GATTTCAAGACCGATCTGCG 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 3 3 3 80 X 9566938 9566956 TGTTTACACCTGCAACCAC 58 9566814 9566897 ATACACAGATCGAAGTCATCAC 58 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 1 2 2 95 X 9857824 9857844 ATTCGATCAGGATAACGACGA 59 9857689 9857767 AACAAGTTGCTCTCGAAGC 58 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 3 2 2 163 X 9873643 9873811 ATACTTTCTGAGGCTCATGAC 57 9873383 9873401 TTCGGTTTACCTTTGGCTG 58 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 3 1 1 63 X 10220796 10220815 TGATTAAATTGTCCGCGGAG 58 10220905 10220923 TGCCGGTATACTTTGACAC 57 NA DesignNoJunction Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 1 4 4 80 X 10655534 10655624 CCGTATCCCGATGATATTATCTG 58 10655476 10655495 CACCTTGGACATAATGGACC 58 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 3 5 5 157 X 11027710 11028925 CCATGGTATACAAATACACAGCC 59 11027575 11027593 GTAGATGCCGTTCTTGCAG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 1 5 5 132 X 11029017 11029035 CAAGGACATGCTCATCGTG 59 11027710 11028925 GGCTGTGTATTTGTATACCATGG 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 3 2 4 81 X 11329461 11329480 CGAATCTGGATGATTCGGAC 58 11328831 11329418 GTTATTGGCGTGGGATACTC 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 1 2 4 163 X 11567984 11568086 CCATACAAATCCCAGCTCG 58 11568213 11568231 GCTGTAGCGTATTGTAGCC 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 3 6 6 174 X 11688876 11688897 CAATGGTTAAGACCTATTGCCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0073591 1 1 2 80 X 11818235 11818253 CTGGACAAGGAGTTATCCG 57 11816389 11818194 GTTCACAACTTGAAAGATCCAG 57 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 1 4 10 84 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 3 4 4 98 X 11910744 11910819 GTTAATCCCAACACTGGCA 58 11910880 11910899 GTACAGGATGTCCAAGTTGG 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 82 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 3 4 4 80 X 13726824 13726845 ATCCAGATATGAGCCAATTCGT 59 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 Ste:CG33243 FBgn0053243 FBtr0300092 3 1 1 60 X 13946540 13946558 AGTGAACTGGCAACATGTC 58 13946441 13946459 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 3 2 2 81 X 14880361 14880379 CTGCAATGAGTCCTTCTGC 58 14880424 14884362 GAAGCCGCATACATACCTG 58 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 3 2 5 90 X 15271599 15271618 CTCATCATCCTGCGATTCTC 58 15265713 15266196 GATATCACCATTCTGACGTGC 59 NA Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 2 1 1 94 X 15660354 15660372 GATCCTGCCAACAGTTCAC 58 15660204 15660222 TTCAGTATGACCTGCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 3 1 1 95 X 15660354 15660372 GATCCTGCCAACAGTTCAC 58 15660203 15660221 CTTCAGTATGACCTGCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 2 5 5 165 X 15688454 15688537 GATCCACGTAACAAAGTTCCA 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074107 3 1 6 82 X 15754275 15755031 ACACTGCGTTATACCATCC 57 15755074 15755095 CCCGTCTGATTTGTAATTAGGA 58 NA InUTR Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 2 3 3 83 X 16258619 16258638 TGGAGTATGCACGCTATGAG 59 16259258 16259276 ATTTCTTGCGCTCGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 2 5 5 109 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276866 16276946 ACAAAGTTGTGCAAGTCCT 57 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275 2 1 3 100 X 16309609 16309698 GACATTCACGGAACACCTG 58 16309762 16309780 TCAGATGGGATCGCATACG 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 3 3 5 81 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717634 TCGATTTAGGCCAGTCACTG 59 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 2 2 5 80 X 19455820 19456736 GAGTTCATCCAGATTGAGACC 58 19455760 19455780 GGTAAATTCCAGATCAAAGCG 57 NA Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 3 2 2 80 X 19533358 19533378 AGTCCGCATATGAATCCTCAG 59 19533420 19533490 CCACTGGTACACCTTCTCC 59 NA Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624,FBtr0077267 3 2 2 167 X 20902714 20902732 CTGAGATCTGCAACCTGTG 58 20902513 20902532 TTTCCTTGAGTCCTTCGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 1 2 4 132 X 21296198 21296519 CCTATATGAAATGGAGCGTCCT 59 21295942 21295960 ATAGAGTCTGCCGTTCAGG 58 NA Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337 3 1 2 110 X 375536 375645 AGTAGGAGTAGATTGTCTGCC 58 375446 375464 TAGCATCTGATCAGGCTGC 59 NA Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 1 1 1 166 X 6174522 6174540 ATGTGAAGGTGTATCGCGA 59 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:G3:35Bc FBgn0011864 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U14:30Ea FBgn0063392 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30509 FBgn0050509 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR33535 FBgn0053535 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:snR38:54Eb FBgn0063374 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD9a FBgn0082918 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-309 FBgn0067695 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:12Ee FBgn0011952 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 2 1 1 92 XHet 63655 63674 AGAAGCTTAGAGAAGTGGCT 58 63729 64080 AATCCTTTGATGGTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-2876 FBgn0086671 FBtr0091623 3 1 1 60 X 17038905 17038925 TATCCGTAGCGTCATAATGTG 57 17038865 17038886 AATGTCTCTTCGTTTCATACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR11386 FBgn0260447 FBtr0299927 1 1 1 70 X 7791767 7791984 TATGTGCATATTCGTGGCC 58 7791715 7791733 TTATTGCAGCGTGGATGGA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 3 3 3 116 X 11985771 11985853 AAAGACTGAGAAACGCACAC 59 11985932 11985950 TTAATTAGCGCCACGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17599 FBgn0031196 FBtr0077363 3 1 1 133 X 21945966 21946050 AAGGATGTGCGAGATCTGG 59 21945851 21945869 GCTAGCCATTGAAGGAGCT 59 NA Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 3 2 2 80 X 21241688 21241710 CTCATATTCTGCAAGAGACATCG 59 21241747 21241838 AAGTATCTTTGTAATGGCACGG 59 NA Nonspecific Drosophila melanogaster 61 CG15446 FBgn0031155 FBtr0300353 1 1 1 81 X 20972941 20973057 CTACGAAGCTGCTAGAATTATCC 59 20972882 20972900 GTTCGGATGCTTCACTTCG 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089643,FBtr0089642 2 2 2 101 X 20299187 20299267 ATTAAGAAACACGAGGGTCGA 59 20299106 20299124 CATTTGCGCAATGTCTTCG 58 NA Drosophila melanogaster 61 obst-A FBgn0031097 FBtr0077334 2 1 1 102 X 20112261 20112279 GTCTTCGATCCACTCAACC 58 20112690 20112708 AGTACTTGCTGGACTTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15322 FBgn0031088 FBtr0301569 3 1 1 139 X 20031046 20031508 CACTTTATGCGTATCCGCTG 59 20031610 20031628 CAATGCTGTCGGAGATGTC 58 NA Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074807 2 1 2 61 X 19676921 19676939 CGAAGCAGAAGTCCAAGTC 58 19676533 19676899 GTATTTGTATTATCTGCGCCTC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14231 FBgn0031060 FBtr0074814 3 1 1 125 X 19595669 19595687 CTATGTCCTGGGCATCGAG 59 19595507 19595580 ATAATGCCTCCATAGCGGG 59 NA Nonspecific Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082,FBtr0074784 3 2 2 93 X 19382707 19382780 GGATTCAAGTCAGCATCATGG 59 19382634 19382652 AAGGTGCTCAGATAGTCCC 58 NA Drosophila melanogaster 61 CG14191 FBgn0030981 FBtr0074665 2 1 1 149 X 18975765 18975898 AAACACGCCAACATGAAGG 59 18976011 18976029 GTATCCGCCGCTATATCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 3 2 2 200 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18802347 18802366 TAGAAGTAGCGCGAGATGTC 59 NA Drosophila melanogaster 61 CG7358 FBgn0030974 FBtr0074652 2 1 1 123 X 18786884 18786902 GAGACCATCATCGATTGGG 57 18786706 18786797 CCAGAACCTAAACCTGGAC 57 NA Drosophila melanogaster 61 CG15044 FBgn0030928 FBtr0074627 1 1 1 60 X 18385664 18385682 GAACCACTACGATGACGAC 58 18385622 18385640 ATAGCTCATGAGCACCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6106 FBgn0030914 FBtr0074553 1 1 1 117 X 18253030 18253104 TTATACGCAGGGTGCTACG 59 18253185 18253203 TTGGGATCAATCAGACCGG 59 NA Drosophila melanogaster 61 CG12672 FBgn0030886 FBtr0074539 2 1 1 60 X 17900151 17900171 CCTATGAGAAGTACCCATCAC 57 17900111 17900129 TAGGTGAGGCTTAAGAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Socs16D FBgn0030869 FBtr0074473 3 1 1 80 X 17716916 17717004 GAGCAAGATCAGGGAACCT 59 17716854 17716872 GGCCTTCTCAATGAACTCG 58 NA Drosophila melanogaster 61 CG13002 FBgn0030804 FBtr0074343 1 1 1 101 X 16783946 16784024 TTCGAGGGATTCAGAGCAC 59 16784089 16784107 GACGAATCGGTGTATTGCC 59 NA Drosophila melanogaster 61 CG4872 FBgn0030799 FBtr0074339 1 1 1 82 X 16776276 16776364 TATTAACGCTGTGGGAGCC 59 16776410 16776428 AATCCACGTAGACCTTGGC 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 3 4 4 80 X 16649794 16649883 AAGCTGAAAGTCAGCACTG 58 16649732 16649752 GGTGTTCGAGATAAAGACCTC 58 NA Drosophila melanogaster 61 CG34325 FBgn0085354 FBtr0112527 3 1 1 106 X 16614804 16615256 CAACTGAAATTTGCACGTGTG 59 16610669 16610687 CTTGTGACAGATGGACGGT 59 NA InUTR Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074293 1 1 2 132 X 16480553 16480571 AAGCGCAATGTCAATGTCC 59 16462287 16462305 CACTGCTTGCTATTCCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 2 2 2 80 X 16161737 16161816 ACACAAGTTCCACTTTACGAG 58 16161677 16161697 AGGTTCTCCTGTATAGTTGGC 59 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 1 3 3 80 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965138 15965156 CTTGCGATAGTTGATGGCG 59 NA Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191 1 1 2 194 X 15679150 15679242 AGTATCCGGAATAGGAATCGG 59 15678976 15678996 GGAATATCACATCCGGATCCT 59 NA InUTR Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021,FBtr0074022 2 2 2 61 X 15165607 15165625 ACCTGATGGGCATCATCAG 59 15165564 15165584 ACATACCACATGCAGATAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4s3 FBgn0030615 FBtr0074028 3 1 1 81 X 15009946 15010262 GAAAGGCGAGATCCTTAACTG 58 15009885 15009903 CAGATCCTTGCCAAACCAG 58 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110968 1 1 3 80 X 14966671 14967978 AAGATAATGTGCCAGTTCCC 58 14966610 14966630 AGATCTTATTGGATAGCCGTC 57 NA Drosophila melanogaster 61 hiw FBgn0030600 FBtr0073970 2 1 1 80 X 14954012 14954030 TGAATAAGCCGACCAGACC 59 14953755 14953968 GCAACTTCACGGGAAACTC 59 NA Drosophila melanogaster 61 Muc12Ea FBgn0052602 FBtr0073911 2 1 1 81 X 14175317 14175335 GCCTACAACTCTGAAGCCA 59 14175378 14175618 CGTAGTTCCACTAGTTCCCTC 59 NA Drosophila melanogaster 61 CG1434 FBgn0030554 FBtr0073903 3 1 1 101 X 14133631 14133717 TCCCAGTGATAATCATCTGC 57 14133780 14133799 AACAATTTGTCACACTGCTG 57 NA Drosophila melanogaster 61 CG10996 FBgn0030525 FBtr0073836 1 1 1 60 X 13691616 13691635 GGACATCTTTGGTATTGCGA 58 13691575 13691593 GTAGCGACGAATCACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mus101 FBgn0002878 FBtr0073817 1 1 1 60 X 13618514 13618535 GGAATGACTATTGTCGTATCCA 57 13618554 13618574 CTGTCGCATTAATAAAGTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1673 FBgn0030482 FBtr0073777 1 1 1 80 X 13293909 13293929 GATCATCAGCTAACCGAAGTG 59 13293969 13294056 GGTAACCAGTTCTTGTTCTCC 58 NA Drosophila melanogaster 61 CG15744 FBgn0030466 FBtr0073756 2 1 1 81 X 13182644 13182730 CAGTATTGTCAGCATCAATGC 58 13182771 13182791 CTTGAGTTCCGTAAAGTTTCG 57 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0112849 3 3 4 82 X 13094092 13094110 TCTCAAGTACGATGCCGAG 59 13093969 13094049 CGTATTTAAACTTGTTGAGGGC 58 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0112849 2 3 4 81 X 13091758 13091840 CGATCCAATCAGGTTAATGCG 59 13091697 13091715 CAACGGTAGAAGCGAAACG 59 NA Drosophila melanogaster 61 CG12714 FBgn0040862 FBtr0073744 2 1 1 208 X 13005846 13005865 CTTTACAGCTTTGAATCGCA 57 13005437 13005677 ATTTCTTCATCGGCTTCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2209 FBgn0030441 FBtr0073717 2 1 1 60 X 12916429 12916448 GATCCAGAATTCGAATGCGA 58 12916469 12916489 TCATAGTCTTCAAGGATTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15719 FBgn0030440 FBtr0300371 1 1 1 80 X 12898406 12898479 TATGATGGTTGAGAGCGAGAC 59 12898346 12898366 ATGCCGATATTGGATCTCCTG 59 NA Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 2 2 2 103 X 12670826 12670914 CAAACTGTACCAGGAACGC 59 12670741 12670759 GCATTATGGTGGACATGGC 59 NA Drosophila melanogaster 61 CG1924 FBgn0030377 FBtr0073634 1 1 1 60 X 12071870 12071891 CTTTGAAATTCGCATTGACCAC 59 12071831 12071850 CTTGAAATCGGTTAGCAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12721 FBgn0030373 FBtr0073637 1 1 1 60 X 11966367 11966385 GCCTTTGTCATCAAACGGG 59 11966325 11966343 TCTTGTCGAGAATCTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango4 FBgn0030365 FBtr0073622 2 1 1 87 X 11915235 11915253 ATATTCCGCTCCCTGAAGC 59 11915302 11915381 GCAACTTCTCTAAACGTTCGT 59 NA Drosophila melanogaster 61 dy FBgn0004511 FBtr0073612 3 1 1 137 X 11670887 11672081 CTAGGACCTATTAATAGCAACACC 58 11670773 11670791 ATTTCTGTAGCGCACTTGC 59 NA InUTR Drosophila melanogaster 61 antdh FBgn0026268 FBtr0073468 1 1 1 80 X 11062397 11062494 AGATTACGAGCGTCAGTCC 59 11062335 11062353 GCATTCGATCCTTGATGGC 59 NA Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073430 2 1 3 159 X 10986741 10986821 CTCGTATTTCGCTTCGTCC 58 10986942 10986962 TGAGTGCAAGTTAGGAAATCG 58 NA InUTR Drosophila melanogaster 61 CG15203 FBgn0030261 FBtr0073392 3 1 1 86 X 10960949 10961813 AATACTTATCGAGGGTTGCG 57 10961862 10961880 CATTCCGGAAAGGGTTCAC 58 NA Drosophila melanogaster 61 CG2974 FBgn0030178 FBtr0290234 2 1 1 168 X 9979510 9979528 GAACTAATGCAGCAGACCA 57 9979302 9979320 CCAAGTAGTGATGTTCGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42657 FBgn0261522 FBtr0302457 3 1 1 98 X 9582790 9582874 TCTCATTGCAAAGGACAATGG 59 9582931 9582952 GACAACTAATTGGTTCGATTCC 57 NA DesignRelaxed Drosophila melanogaster 61 RpS28b FBgn0030136 FBtr0071360 1 1 1 104 X 9448947 9449032 ACCAAACTCGAGAAGACCT 58 9449100 9449118 TTCGGATTTCTTGCCATCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12661 FBgn0030071 FBtr0071265 1 1 1 60 X 8817383 8817401 GCCTAGAGAAGTGCATCCA 59 8817341 8817362 CAACGTTCCAAGCTATAATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11294 FBgn0030058 FBtr0071224 3 1 1 103 X 8587360 8587378 AGGCACTCTTCCAGAAGAC 59 8586765 8587293 ATTCTGGAACCACACCTGG 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0071215,FBtr0300751,FBtr0071214,FBtr0300750,FBtr0071216 2 6 6 80 X 8478276 8478495 GACTTTCCCAGAGACTACGT 58 8478538 8478556 GATCGACTGGATCTCCGAG 59 NA Drosophila melanogaster 61 CG15337 FBgn0030014 FBtr0071160 2 1 1 96 X 8054229 8054247 CAAGCCCAGAACCAAACTC 59 8054375 8054394 AATAGGACGTGAGGATACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4095 FBgn0029890 FBtr0070955 2 1 1 266 X 6576445 6576546 ACACCAACGAGGTGATCAG 59 6576776 6576794 GAACTGCGTCCATCAAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3226 FBgn0029882 FBtr0070993 2 1 1 87 X 6548000 6548018 ACGGGAGATTGTCAATCTG 57 6547754 6547949 GTGCAGATATCTCTTGGCT 57 NA Drosophila melanogaster 61 Spat FBgn0014031 FBtr0070913 1 1 1 80 X 6424400 6424418 GAACACGATTAAGGTGCCC 58 6424459 6424548 CTAATCTCAACGCTGTACTTGC 59 NA Drosophila melanogaster 61 CG34435 FBgn0085464 FBtr0112736 3 1 1 86 X 5508288 5508306 CAATGAATGTGACCAGGCG 59 5508161 5508179 ACATCCGTCATCCGTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3323 FBgn0029750 FBtr0070758 1 1 1 203 X 5199536 5199554 GATACGCCAGTTAGATCGC 58 5199275 5199369 TTGCTGTTGTTAACGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949 3 1 5 105 X 4826656 4826677 AGTTGTTCTCCTCAACTAACCT 59 4824090 4826592 GCATTTGTGCTCAGATAAACC 58 NA InUTR Drosophila melanogaster 61 CG12684 FBgn0029717 FBtr0070697 2 1 1 68 X 4465668 4465689 TCGGATTCGGAACTTAATTCAC 58 4465569 4465587 GCTATCGCTAGAGGTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CHOp24 FBgn0029709 FBtr0070675 2 1 1 113 X 4435570 4435943 CAGGAGTACATGCATGTGC 59 4436020 4436038 CACTGTCATCAGGACCAGG 59 NA Drosophila melanogaster 61 mei-9 FBgn0002707 FBtr0070656 1 1 1 80 X 4211046 4211066 TCTGGCATCAGCTTAATTCTC 58 4210926 4211006 ACATGGTGGAGATCATTAAGC 58 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 2 2 2 259 X 3685573 3685591 ATCAAGAAGATTGTGCCCG 58 3685814 3685832 TCTTCTTCACCGCACTCTG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 dm FBgn0000472 FBtr0070525 3 1 1 150 X 3270259 3278431 AGATTCCGATGAGGAAATCG 57 3278544 3278562 GAAGTTATTGTAGCGCGGT 58 NA Drosophila melanogaster 61 CG18508 FBgn0028746 FBtr0070543 2 1 1 116 X 3067009 3067087 CATTAAATAGCCCGAACAATGG 58 3066914 3066932 CTTCTCCCAGGGATTCCAG 59 NA InUTR Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 1 2 2 96 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024843 3024861 AATCCATTGACCACAGCCT 59 NA Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0070546 3 1 2 116 X 2787183 2787263 CATGAACTGAGTGGTTCGC 59 2787341 2787361 GTAGCGATAGAAGGTCATCCT 58 NA Drosophila melanogaster 61 w FBgn0003996 FBtr0070490 3 1 1 80 X 2685369 2685459 TGCCACGATAAATGTGTTCAC 59 2685309 2685330 TATGTGTCACAGCGATAAAGTC 58 NA Drosophila melanogaster 61 CG8310 FBgn0040377 FBtr0070450 2 1 1 219 X 2473970 2474043 GGCAAGATCATTGAGACCA 57 2473769 2473787 CCAACTCATAGGTGTCCAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3621 FBgn0025839 FBtr0070386 3 1 1 128 X 2066704 2066722 CTTTAATCCAGCGCATTCG 57 2066914 2066932 AGAGTAGATGCGATGGACC 58 NA DesignNoJunction Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428,FBtr0070427 2 2 2 97 X 2053588 2053666 GCGAGATCAATGGAAAGCT 58 2053509 2053529 GATATTGGGCTCGCTAAAGAG 58 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344,FBtr0070345,FBtr0070343 2 3 3 81 X 1921371 1921389 AAGCCTTTGAGTCTGACCT 58 1920934 1921326 TCCAGAGTGTTAAGCTCCT 57 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 1 1 1 189 X 1562775 1562856 TACAAGATGACAAGCGGCA 59 1562604 1562622 CAGTGTTAAGCACAGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13360 FBgn0025620 FBtr0070147 1 1 1 102 X 682697 682717 ATCACTGTGCTTAATCATGGC 59 682551 682634 GGAAATCCACGAATATGGCA 58 NA Drosophila melanogaster 61 Suv4-20 FBgn0025639 FBtr0070151 3 1 1 93 X 547468 547486 ATCCAGCGCATATACGAGG 59 547262 547412 ATCGGACGATATGATCGTGG 59 NA Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 2 2 2 80 X 94983 95065 CCTGAAGACACTCCCTATGG 59 95106 95126 GATGATCTTAAAGCTGGTGCG 59 NA Drosophila melanogaster 61 CR40565 FBgn0085745 FBtr0114195 1 1 1 63 U 9807292 9807310 AGTAGCCAAACACCTCGTC 59 9807247 9807265 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40546 FBgn0085742 FBtr0114192 1 1 1 94 U 5728175 5728194 CGTCATCAATTTAGTGACGC 57 5728251 5728269 ACGAGGTGATTGGCTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-CD8 FBgn0086061 FBtr0114337 1 1 1 60 3R 25688374 25688392 CTGCAATTGTGCTCTCGAG 59 25688414 25688434 CAGTAGTCCGAACATAAAGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cec-Psi1 FBgn0000280 FBtr0085613 1 1 1 80 3R 26037261 26037282 TTTATTTGTCCTCATCCTGACC 58 26037318 26037402 GTGTATAGACCAACGTCTAATGTC 59 NA Drosophila melanogaster 61 tRNA:CR31333 FBgn0051333 FBtr0083977 1 1 1 60 3R 16717385 16717404 TTTAGCTCAGTGGTAGAGCG 59 16717427 16717445 CTGTGAGGGTTGAACTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301248,FBtr0301250,FBtr0301176,FBtr0301249 3 4 4 60 3R 5374718 5374736 GGCCCATGTACGTTAAGTG 58 5374676 5374698 CGAAAGATTCCAGATCAACAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nero FBgn0261479 FBtr0085863 3 1 1 60 3R 27573141 27573159 TCTGAACAACAAGGAACGC 58 27573099 27573117 GTTCTTCAGCGTGAAGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11563 FBgn0039868 FBtr0085831 2 1 1 98 3R 27563233 27563252 GAAACCAGTCGTAGAGGAGG 59 27563311 27563389 TTGGGTAATCTGAACTCTGGG 59 NA Drosophila melanogaster 61 gskt FBgn0046332 FBtr0085784 1 1 1 60 3R 27198863 27198883 ATCTGCTCAAGGTACTATCGT 58 27198905 27198923 TGGTGGTATAGTCAGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 1 3 3 80 3R 27027474 27027493 GACACTGGCTTGGATTACTC 58 27027533 27027614 GGGATGGATGTTAAAGTCTTCG 59 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960,FBtr0085780,FBtr0085779,FBtr0300961 3 4 4 80 3R 27011413 27011434 GAACTGGCTTTCTCATACTGAG 58 27010803 27011374 GCATTGAATCCGACATATGCA 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 3 12 12 85 3R 26398249 26398333 AACATTAAGAACATCTCGGACG 58 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 PH4alphaMP FBgn0026190 FBtr0085689 1 1 1 80 3R 26318970 26319355 TTAAATATGGTACGGCCATGTC 58 26318911 26318929 TGTGGTTGTAATCTCGCAG 57 NA Drosophila melanogaster 61 Jon99Fi FBgn0039778 FBtr0085652 1 1 1 67 3R 26314914 26314932 ATCATCGGAAACACCTGGG 59 26314963 26314981 TTGATGGTCACTCCACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2218 FBgn0039767 FBtr0085627 2 1 1 216 3R 26252530 26252870 CTGGGAGCTAATGATCTTCC 57 26252333 26252353 CTTGAAGTGCTCCGAATTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG18404 FBgn0039761 FBtr0085618 1 1 1 86 3R 26079237 26079256 GATTATATGCAACCCGAGGC 59 26079303 26079390 AATGGCATTAGCCAAATCTCC 59 NA Drosophila melanogaster 61 CecB FBgn0000278 FBtr0085640 3 1 1 131 3R 26039362 26039380 CTGGTTGGCTTAGGAAGCT 59 26039191 26039210 CTTGATTTCAACCTCGAGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7928 FBgn0039740 FBtr0085600 2 1 1 60 3R 25862363 25862381 CGACGATCTGCAAGAAGTG 59 25862321 25862341 GCTATTTGTATGGACTTGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15514 FBgn0039712 FBtr0085523 2 1 1 60 3R 25686348 25686438 TGAAGAAGAGGTCACTTCGA 58 25686307 25686325 GTTGTCCACAACGTACTCG 58 NA DesignRelaxed Drosophila melanogaster 61 fig FBgn0039694 FBtr0085538 1 1 1 60 3R 25605497 25605515 CTTCAACACGCCCTATCAG 58 25605455 25605474 GCAGTAGTAGCTCTCCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 1 10 10 103 3R 24962132 24962216 CAATGATAAGCCCTACTCCGA 59 24962281 24962299 TTTCACAGTTCTCCGGAGG 59 NA Drosophila melanogaster 61 CG11873 FBgn0039633 FBtr0085365 2 1 1 80 3R 24929959 24930041 AAGGCTAATCAGGTATCATTGC 58 24930082 24930100 GCAGTGGACTCAAATTCCT 57 NA Drosophila melanogaster 61 beta4GalNAcTB FBgn0039625 FBtr0085419 2 1 1 60 3R 24859554 24859573 TCTCATCGTGTACCTGTGTC 59 24859513 24859533 TTCCTCGATGTAGTCGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31050 FBgn0051050 FBtr0085317 2 1 1 92 3R 24476176 24476194 CTGTGTCTCGATTTCGGTC 58 24476044 24476120 TTGACTTGCGAAGACATGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 3 3 3 81 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765496 ATCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 Mes-4 FBgn0039559 FBtr0085267 2 1 1 80 3R 23761832 23761850 AAGCTATGACCCAGATCCC 58 23761702 23761790 GCCTATTAAGAGTGACAACGT 58 NA Drosophila melanogaster 61 CG33213 FBgn0053213 FBtr0085271 3 1 1 60 3R 23744809 23744829 CATTCCAGTGAAAGAACTGCA 59 23744769 23744787 CTTGGGAGACTCTGTAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98a FBgn0039551 FBtr0085226 3 1 1 80 3R 23672422 23672500 CTCATTATTGACTATGCTGCAG 57 23672540 23672559 GCAAATTCCGATCAAGAGGA 58 NA Drosophila melanogaster 61 CG34353 FBgn0085382 FBtr0112563 1 1 1 80 3R 23604679 23604697 GCATGAGCTACATGGTACG 58 23604286 23604636 TCCATCCGTATCGATTCCTG 59 NA Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 2 2 2 110 3R 23094416 23094503 TTTCTGGCACCACATTTCTG 59 23094325 23094343 TTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 spn-D FBgn0003482 FBtr0085116 3 1 1 93 3R 22992118 22992137 AATCCACTATGTGAGGTGCC 59 22992190 22992366 CAGCTTAATATCGGGATGATCG 59 NA Drosophila melanogaster 61 gb FBgn0039487 FBtr0085132 2 1 1 94 3R 22936359 22937003 ATGATATTCGTACCAACGACCA 59 22936286 22936304 TTGGGAATCTCACAGGCTC 59 NA Drosophila melanogaster 61 CG14258 FBgn0039482 FBtr0085103 2 1 1 80 3R 22919287 22919361 TTAGTCTTGGAATCCAGCTGG 59 22919401 22919421 GAAATTGAAACGCAACTTGGG 59 NA Drosophila melanogaster 61 TwdlC FBgn0039469 FBtr0085075 3 1 1 182 3R 22820778 22821011 TTTGCCACTCAATGCTCAC 59 22821156 22821175 CTGTCATCGTAGGCATTCAG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100337,FBtr0100335,FBtr0100340,FBtr0100339,FBtr0085093,FBtr0100336,FBtr0100334,FBtr0085092 1 9 9 88 3R 22701114 22701274 GAGGAAGATGACATATGCGAG 58 22701046 22701064 AACTTCAGGTTCTCCTCGG 59 NA Drosophila melanogaster 61 TwdlM FBgn0039434 FBtr0085029 3 1 1 61 3R 22444892 22444988 CGTGCCTTCATTGTTATGTG 57 22445010 22445030 TAGTTGTAGCCGAGCTTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995 3 1 6 260 3R 22083753 22085533 GCAAGTGTAGAACTACACTCG 58 22083513 22083531 ACTCCAGAGATGTTCTCGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 m1 FBgn0002578 FBtr0084957 3 1 1 69 3R 21840730 21840748 GAAAGGAATAGCGTGCAGG 59 21840843 21840861 GATTCTCGACGAACTCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14354 FBgn0039376 FBtr0084905 2 1 1 62 3R 21641703 21641778 GTTGGTTCACAGACAAATGTC 58 21641802 21641820 CAACAGCGTTTGACATTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 1 2 2 82 3R 21505847 21505865 TTCCTTAGTTCGGTCACCC 59 21505720 21505801 AAGCATGCCAACACTTCTG 59 NA Drosophila melanogaster 61 MED28 FBgn0039337 FBtr0084836 3 1 1 61 3R 21302948 21302966 TGGAGGTACAGAAGACCAC 58 21302991 21303009 GAAGAACGCCTCCATTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10562 FBgn0039326 FBtr0084851 3 1 1 166 3R 21147812 21147830 CACCAAAGGACCCTATCCC 59 21147596 21147682 CAGGCTGTAACGCTTTGAC 59 NA Drosophila melanogaster 61 CG31106 FBgn0051106 FBtr0301022 3 1 1 80 3R 21042175 21042263 TTCAGATTATTGGATTCGGGC 58 21042302 21042323 TCTCGTTTATGACCATCATCAG 58 NA Drosophila melanogaster 61 CG13631 FBgn0040600 FBtr0084693 1 1 1 121 3R 20595286 20595304 TACGTCTCGTACACCAACG 59 20595389 20595407 GTACCGAACATCACCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5789 FBgn0039207 FBtr0089906 2 1 1 80 3R 20367129 20367150 CTTAATACGGATGACCTGACAC 58 20366964 20367090 AAACCATTGATCCTCCAAACG 59 NA Drosophila melanogaster 61 CG13617 FBgn0039201 FBtr0084641 1 1 1 80 3R 20343025 20343101 TTCTGGAAGAATCATCAAGAGC 58 20343141 20343160 GACATCAACTTCCGGTTGAC 59 NA Drosophila melanogaster 61 nAcRalpha-96Aa FBgn0000036 FBtr0084619 1 1 1 92 3R 20238295 20238313 GAATCCGGATGACTATGGC 57 20233212 20238240 CCATCGGCGTTGTTATAGAG 58 NA Drosophila melanogaster 61 HDC15381 FBgn0086610 FBtr0113461 1 1 1 117 3R 20202746 20202817 ACAAACAAGATTGTCGCTGG 59 20202897 20202915 AGTAAATTGGGACAGGCGA 59 NA Drosophila melanogaster 61 CG5720 FBgn0028471 FBtr0084633 1 1 1 80 3R 20141033 20141051 ATAGACTGCAACTACGCCC 59 20140910 20140990 GACGTGAGAGGATAGTGGTG 59 NA Drosophila melanogaster 61 Spase22-23 FBgn0039172 FBtr0084564 2 1 1 60 3R 20055567 20055586 TTTCTTGACTACCGTACCGA 58 20055526 20055544 GGACATTCTTCACCAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13605 FBgn0039150 FBtr0300705 3 1 1 90 3R 19936539 19936559 ATCAAACTGCTGACAATGCTG 59 19936255 19936487 ACACATAAAGCCTAGCCCG 59 NA Drosophila melanogaster 61 Syx1A FBgn0013343 FBtr0084588 3 1 1 60 3R 19929342 19929363 AGATCATGATACTGATCTGCCT 58 19929303 19929321 CTGCTAACATATGAGGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31413 FBgn0051413 FBtr0084442 3 1 1 60 3R 19529409 19529427 GCCAACATAAGTGAAGCCT 58 19529451 19529469 GAGAGGGATGATGCTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL45 FBgn0038996 FBtr0084272 1 1 1 166 3R 18444325 18444410 AAACTGCTGCAGGTTATGC 59 18444540 18444558 AACTTGAGCTTACGAAGGC 58 NA Drosophila melanogaster 61 CSN6 FBgn0028837 FBtr0084265 3 1 1 90 3R 18406922 18406940 GAAGACGGACGTTATTGGC 59 18406993 18407070 GAGATCACTGAACACCTGCT 59 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252 1 1 3 80 3R 18288243 18288321 CACTGTCCATATAGCGCAC 58 18288365 18288383 TAAACTCGCGAGATCAGCA 59 NA InUTR Drosophila melanogaster 61 CG12499 FBgn0038968 FBtr0084295 1 1 1 97 3R 18271798 18271869 TCATAACAGAACTGCGACAC 58 18271720 18271738 TAACTCCAAGGGCTTTCCA 58 NA Drosophila melanogaster 61 PSR FBgn0038948 FBtr0084239 1 1 1 60 3R 18186999 18187022 CGATAGTATTAACCTGAACGAGAG 58 18186962 18186980 GCTTGAATTGCTGGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6678 FBgn0038917 FBtr0084148 2 1 1 111 3R 17714887 17714905 CCTGTCCTATGTGGATGCT 58 17714980 17731658 AGCCGTACACTTCAAATGG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084024,FBtr0301585,FBtr0112916,FBtr0084019,FBtr0301587,FBtr0084020,FBtr0110939,FBtr0084021,FBtr0110937,FBtr0112915,FBtr0301586,FBtr0084018,FBtr0110938,FBtr0084022,FBtr0301589 1 16 16 118 3R 17037305 17037480 ATGTGATTAATCTCGCCGC 58 17037562 17037580 CGATTCGTCCAGATTGCAC 59 NA Drosophila melanogaster 61 CG5802 FBgn0250820 FBtr0084017,FBtr0113259 3 2 2 80 3R 16965293 16965423 TATTTACAGGTGAGGCCAAGG 59 16965463 16965483 CAGCTATCAGCGATAAATGGG 59 NA Drosophila melanogaster 61 CG4462 FBgn0038752 FBtr0083850 3 1 1 85 3R 15748906 15748995 AGCCATATTTGCCGATATCAC 58 15748841 15748859 GAATCACACCAATGGACCA 57 NA Drosophila melanogaster 61 CG11453 FBgn0038734 FBtr0083791 1 1 1 81 3R 15609858 15609876 TCAAGGATCATCGACTGGG 58 15609919 15609999 GTTTCGGGTACATAGTACAGC 58 NA Drosophila melanogaster 61 CG31245 FBgn0051245 FBtr0083773 2 1 1 138 3R 15202658 15202676 CGGAACCTACTAGATGGCA 58 15202472 15202556 ATGGGTTTGCTATCTCGCT 59 NA Drosophila melanogaster 61 sqz FBgn0010768 FBtr0083733 1 1 1 166 3R 14993957 14993975 ACAGCAAATGGTCATGGAG 58 14994105 14994303 GATTCGGGTCGTACTTCTG 57 NA Drosophila melanogaster 61 Cyp12a5 FBgn0038680 FBtr0083730 2 1 1 85 3R 14959527 14959548 CGAGAAACTACTGAAGGTTGAC 59 14959592 14959664 TGCTCGAAGTAGTATCCACTC 59 NA Drosophila melanogaster 61 cona FBgn0038612 FBtr0083624 3 1 1 89 3R 14212281 14212301 GAGAATTTGTTAACACCACCC 57 14212350 14212441 CTTCGATTATCCCAATGAGGT 57 NA Drosophila melanogaster 61 CG18599 FBgn0038592 FBtr0083571 3 1 1 164 3R 14096185 14096322 AAACTCAAGTCGGATTCTCAC 58 14096446 14096466 CTCCGTTAACTTTAGGGTGTG 58 NA Drosophila melanogaster 61 CG7215 FBgn0038571 FBtr0100283 1 1 2 91 3R 13991871 13992084 TGGTGAAAGTAGGAGACTCC 58 13991799 13991817 CTTGCCATTGACGAGATCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14323 FBgn0038529 FBtr0083498 3 1 1 60 3R 13447288 13447306 GGGTATTCTGGACCAGGAG 58 13447246 13447264 GGAAGGGTATTGGAAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-IIa FBgn0038498 FBtr0083453 1 1 1 106 3R 13158292 13158310 TAAGTTCTACCGTGGCCAG 59 13156863 13158222 TGGAGCTGCTTACATCCAC 59 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411 2 1 2 81 3R 13058999 13059021 CGATCTCTATCAGGAGTACAAGG 59 13058614 13058958 TGATGACAGCGTCACTCTG 59 NA Drosophila melanogaster 61 CG5255 FBgn0038485 FBtr0083406 1 1 1 89 3R 12964334 12964411 ATATCCAGATGCTCACGCT 58 12964464 12964482 ATATCCTCAGAGCTGTCCG 58 NA Drosophila melanogaster 61 CG31267 FBgn0051267 FBtr0083404 2 1 1 90 3R 12960061 12960079 ATTTAGCTCCCGAATCGTC 57 12960133 12960317 AAAGTGGTTACCATAGGCG 57 NA Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083398 1 1 2 173 3R 12908217 12908393 CAGCAAATCTGTGAGATCGTG 59 12908528 12908546 CCAGAAGATTGCTGCAAGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12783 FBgn0038448 FBtr0089666 2 1 1 90 3R 12437907 12437925 GAATGGCATGACCTTCTGC 59 12437765 12437853 GTCACTACAGACCACGTCC 59 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 1 1 1 133 3R 11849432 11849778 CGAATCAGACCTGGTCTGG 59 11849875 11849893 ATAGCCACAGCCATAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 blp FBgn0038387 FBtr0083203 1 1 1 182 3R 11759646 11759731 ATTTACCTGAAGGACGCCT 58 11759877 11759895 TCTGGGCGATATACTTGGC 59 NA InUTR Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 1 3 3 80 3R 11742175 11742195 GAGGAGTGTCTTCCTATTTGC 58 11742055 11742134 GTCGCTCAATTACCGATAGG 58 NA Drosophila melanogaster 61 CG31344 FBgn0051344 FBtr0083136 2 1 1 96 3R 11050101 11050473 TATTCAGGCGTGGTCAGAG 59 11050023 11050041 ATGGATGGAATAGCCAGCA 58 NA Drosophila melanogaster 61 RpS5b FBgn0038277 FBtr0083006 2 1 1 65 3R 10726408 10726684 TGTCAACCAGGCAATTTGG 59 10726361 10726379 GTCTTGATGTTGCGGAAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9920 FBgn0038200 FBtr0082917 3 1 1 261 3R 9923621 9923714 CAAACAAGAAACGATGTCCA 57 9923379 9923399 CATATCGACCTTAGTTCCACC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14374 FBgn0040553 FBtr0082761 2 1 1 147 3R 9222801 9222819 CATCTGCTTGACCCTTTGC 59 9222672 9222690 GTAGGTGGAGTATGCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wntD FBgn0038134 FBtr0082775 2 1 1 60 3R 9118820 9118839 TTCATGGGTATTACGAGCAC 57 9118779 9118799 TGTACTGGTAGTAGCTCATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8508 FBgn0038123 FBtr0082783 1 1 1 60 3R 9011755 9011776 AACATACTCATTGACGATACCG 58 9011716 9011735 TTTCGGTGATACGCTTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11656 FBgn0038109 FBtr0082698 1 1 1 130 3R 8835795 8835893 ATTATCTCAAGAGGCTGCTG 57 8835986 8836004 TCTTCTTGGAACTCCTCGA 57 NA Drosophila melanogaster 61 CG18549 FBgn0038053 FBtr0082632 3 1 1 107 3R 8280437 8280458 TATCTACCTGTTCTTCTCGCTC 59 8280523 8280615 ATGAAGGCTGTATAGGTCAGTG 59 NA Drosophila melanogaster 61 CG4860 FBgn0037999 FBtr0082623 2 1 1 116 3R 8046700 8046848 AGAGGAGTATGGTGGTTCC 58 8046602 8046621 CCCAGGTACAGGTTATTCAC 57 NA Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082547 1 1 2 90 3R 7989271 7989355 CCAGAAACTACGGAACCAG 57 7989199 7989219 CAGCAGTAACGATTTCAACAG 58 NA Drosophila melanogaster 61 dpr15 FBgn0037993 FBtr0082549 1 1 1 90 3R 7969207 7969226 GTAGTCAAACTGGATTCCGG 58 7965844 7969155 AATATTCACCGTTCAGCACG 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0301023,FBtr0082528,FBtr0300622,FBtr0082526,FBtr0113391 1 6 6 80 3R 7626255 7626326 TTGCTTTGATTGGACTTGTG 57 7626194 7626215 ATCTCATGAAGAGGACATATCG 57 NA Drosophila melanogaster 61 CG17726 FBgn0037880 FBtr0082352 3 1 1 162 3R 7052696 7052714 AAGATTCTGTCCACCGGAC 59 7052840 7052915 AAATTCCCACGAGCTCTCC 59 NA Drosophila melanogaster 61 SdhC FBgn0037873 FBtr0082372 3 1 1 219 3R 7035451 7035528 CAGGGAAATGTATGCACTCTC 58 7035252 7035270 GATCGAGAGCATGGAGGTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Ugt86Di FBgn0040251 FBtr0082378 2 1 1 81 3R 6978743 6978965 CACAGATATGGTTGGTTCCC 58 6978681 6978699 GTACAGCGACATGTGATCG 58 NA Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 2 2 2 277 3R 6706822 6707298 GGAGCATGATACTTAAATGCC 57 6706565 6706583 GATCTTTAGCACGTCCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 3 7 7 99 3R 6692602 6692621 GTTACGGTGAACAAGGAGGA 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 CG4570 FBgn0037844 FBtr0082287 3 1 1 66 3R 6683497 6683515 TCTACGAGTCGATGACGTG 59 6683545 6683563 CAGAACTCGGTCTGATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 1 2 2 136 3R 6680675 6680693 ATGACCTAAAGGTCCTGCG 59 6681052 6681072 TTTCGACATCTCGAAGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4089 FBgn0037838 FBtr0082281 2 1 1 90 3R 6642583 6642602 AGTACAAGATGCTGCAACAG 58 6642655 6642731 CTCATTGGATCGCGAATGG 59 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 1 2 2 80 3R 6565218 6566919 GACCAAGCACTATTACAATGGA 58 6565159 6565179 GCCATAGAAGTGGGATATCGT 59 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 2 2 2 80 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515482 6515978 CCAGAATTTGGCATCTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090033,FBtr0090032 3 4 4 83 3R 6117702 6117721 TGTCACAAGCACAAGATCTG 58 6117765 6117846 ATCAGCAATCTTAGCATTGCC 59 NA Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 2 2 2 132 3R 5947595 5947613 CTTTACCAATCGTGTGCGA 58 5947761 5947785 TGGATATAGGTAATACCCAGATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Teh1 FBgn0037766 FBtr0082151 1 1 1 127 3R 5690791 5690809 ATAACGGTCATCTCGTCCA 58 5654509 5690703 GAAGTATCACTGAGATTCTCGA 57 NA Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 3 1 1 171 3R 5645282 5645364 TTTGCTGTCCACTTCATGC 59 5645129 5645147 GATCCTTCTTTCGCAGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG16908 FBgn0037741 FBtr0082166 3 1 1 84 3R 5577332 5577350 CTAAACCGATGCTTCACCC 58 5577209 5577286 GTATCACATCACTAAGGCTGC 58 NA Drosophila melanogaster 61 CG16908 FBgn0037741 FBtr0082166 2 1 1 84 3R 5577331 5577349 TAAACCGATGCTTCACCCT 59 5577208 5577285 GGTATCACATCACTAAGGCTG 58 NA Drosophila melanogaster 61 CG9396 FBgn0037714 FBtr0082111 3 1 1 82 3R 5397003 5397021 TGGACTTATCAAGGCCTGC 59 5396881 5396957 ATATGGTCTTGGGTCCTGC 59 NA Drosophila melanogaster 61 RnpS1 FBgn0037707 FBtr0082066 1 1 1 192 3R 5377785 5377809 CTACTCGCATTTAACTCTAGTTGAG 59 5378035 5378053 TCTCTTTGGCGACCTTCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12951 FBgn0037677 FBtr0082058 3 1 1 93 3R 5155982 5156000 CGTAACTACGGTTGGTCAG 58 5155717 5155925 TAGGGATACCACGAAAGGA 57 NA Drosophila melanogaster 61 CG12951 FBgn0037677 FBtr0082058 2 1 1 93 3R 5155981 5155999 GTAACTACGGTTGGTCAGG 57 5155716 5155925 TTAGGGATACCACGAAAGGA 57 NA Drosophila melanogaster 61 Vps16A FBgn0261241 FBtr0081979 2 1 1 80 3R 5094391 5094464 CCATCACCTTCAAACAATTCTC 58 5094505 5094523 CAATGGCATAGTGTTTGCG 58 NA Drosophila melanogaster 61 CG9740 FBgn0037669 FBtr0081984 2 1 1 124 3R 5083898 5083989 GATTATCCATAGGAAGTCATGTCTC 58 5083798 5083816 TGAAGTCAATTGTGGAGCC 58 NA Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081931 1 1 2 86 3R 4646091 4646111 AGACGGTGGTGTACATAAGAG 59 4644977 4646043 GTGCTGATCAGACAAAGGC 59 NA InUTR Drosophila melanogaster 61 Poxm FBgn0003129 FBtr0111026 1 1 1 238 3R 4158851 4158869 TCAATCAATTGCCATCGGC 59 4146429 4146447 TAGTATGGAGCCCGTTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31464 FBgn0051464 FBtr0081830 2 1 1 60 3R 4117618 4117637 GGAGATGTCCTTGGAAGACC 59 4117655 4117678 CATCTTCAGATGATGGTAGAAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091720 1 1 2 83 3R 4069855 4069929 TCTATAGAGGGAAGTGGCCA 59 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18268 FBgn0037520 FBtr0081772 3 1 1 103 3R 3629760 3629890 AAATTAGAGGGCGTAAGTGTC 58 3629677 3629696 TTTCCGGTGCTATCATTGTG 58 NA Drosophila melanogaster 61 alpha-Est1 FBgn0015568 FBtr0081544 1 1 1 80 3R 3373498 3373516 TTCAATTATAGGGTGGGCG 57 3372822 3372840 CTTGAGACCAGCATTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081589 3 1 2 161 3R 3187292 3187414 ACCTATAATAATGAGCACCGC 58 3187151 3187171 CTAGTGCAAGTGTAGCAACTC 59 NA Drosophila melanogaster 61 CG10055 FBgn0037482 FBtr0081605 3 1 1 89 3R 3011922 3012036 GCTGTACAAATTCCACAGCC 59 3011852 3011872 TGGTAGTGATTCTCTGTCGTG 59 NA Drosophila melanogaster 61 Dfd FBgn0000439 FBtr0081621 3 1 1 115 3R 2627072 2627358 ATGAATGAGTGCATTCGTTCC 59 2627435 2627453 GATCCCGGATAAGAGCTGG 59 NA Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 3 2 2 171 3R 2483013 2483031 CAGATCATCAATGGGCTGG 58 2482606 2482878 CTCCATAGCCCTTATCCGA 58 NA Drosophila melanogaster 61 Osi6 FBgn0027527 FBtr0078596 1 1 1 129 3R 2060579 2060597 CAGGTATCTCTGCCGATCC 59 2061318 2061336 TTATCGAACACGGACTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Or83c FBgn0037399 FBtr0078620 1 1 1 80 3R 1903366 1903462 TACATGATTCAGACGGTGAC 57 1903305 1903324 CGTTAAGCCGAGAAATACGA 58 NA Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 1 2 2 81 3R 1651095 1651114 CTGAAGATGCTCATTCGCAG 59 1651158 1651230 TAGCGATTCATGCGATCCA 59 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 2 2 2 80 3R 1487731 1488796 GGGAATAAGTTTCAGTCCCAC 58 1488838 1488856 CGCATGAAGTCCCATATCC 58 NA Drosophila melanogaster 61 RpII18 FBgn0003275 FBtr0078787 3 1 1 178 3R 1197609 1197627 ATGGATGATGCGGACTACG 59 1197829 1197849 ATGTACTTTGTGGTAATGCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11999 FBgn0037312 FBtr0078807 1 1 1 98 3R 1180311 1180329 ACTTCTTACAGGACTGGCG 59 1180104 1180122 GAGTTGAGCAGCTTCAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17387 FBgn0037276 FBtr0078880 2 1 1 81 3R 610093 610171 CTATTCAGCAGAACCTGACAC 58 610032 610050 AAGATCACAAGCTGGACGT 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 1 4 4 175 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-1837b FBgn0082995 FBtr0113608 2 1 1 60 3L 5757301 5757319 CTCTGACACAGATCAGCTC 57 5757259 5757280 GTTCAGTTCACGAAATTGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14454 FBgn0037177 FBtr0078542 2 1 1 295 3L 22685523 22685541 CACATCTACATCCTCGACG 57 22685246 22685264 CCACTTATCCCTGAAGCTG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33771 FBgn0053771 FBtr0290251 3 1 1 106 3L 22642498 22642516 GTGGAAATTGCTTACGCTC 57 22642627 22642645 TGTTGCCGGTAACAAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11404 FBgn0037169 FBtr0078513 2 1 1 81 3L 22541791 22541811 AAAGCATGTGGGACTTTAACC 59 22541850 22541925 AGCAAGGAGATGTGATAGATCTG 59 NA Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 1 1 1 112 3L 22463800 22463818 TTAATGATACGGCGCAGAG 57 22463894 22464984 AGACAAGAGCCAGAAACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CycH FBgn0022936 FBtr0078439 1 1 1 80 3L 21815406 21815500 CCCAAGGAGATTCTAGCCA 58 21815542 21815562 GTTTACGAACTGGTTGATGGA 58 NA Drosophila melanogaster 61 CG14565 FBgn0037129 FBtr0078452 2 1 1 67 3L 21737097 21737115 TTACATGAGGATAGCGCCG 59 21737048 21737066 TTGGGTGTTGTACTCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14572 FBgn0037128 FBtr0078434 3 1 1 60 3L 21734821 21734840 TATAGACCACAAGGTCGCTC 59 21734861 21734881 CTTCAATGACCTCTACTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7158 FBgn0037116 FBtr0078462 3 1 1 110 3L 21670142 21670279 ATCATTGAAGGTTTCGGCA 57 21670050 21670069 ATCCTTACAGTGCATTTCGT 57 NA Drosophila melanogaster 61 Cpr78Ca FBgn0037067 FBtr0078409 1 1 1 80 3L 21285679 21285762 GTCGTTCGGCAAGATTGTG 59 21285617 21285635 AAAGATGGCGCAGTAAAGC 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 3 3 3 99 3L 21265896 21265917 AAGGTAACTCAGTTCTACACAG 57 21265763 21265836 AAACTTTGAGTCCGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9389 FBgn0037064 FBtr0078415 2 1 1 97 3L 21262585 21262604 AGCACACGAATGATATCGTC 58 21262429 21262527 GGCAATAAATTGGTGATTGGG 58 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078303,FBtr0273212,FBtr0273213 2 3 4 84 3L 21208532 21208550 TTATCGAACGAATGGCCAG 58 21208598 21208690 GTGACATAATCGGCTAGCA 57 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038,FBtr0078289,FBtr0301602,FBtr0078290 3 4 4 80 3L 21066244 21066323 TCCGATACGATCTTCGTCC 58 21066366 21066385 ACGTTCTGGCTTTAGATTGG 58 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038,FBtr0078289,FBtr0301602,FBtr0078290 2 4 4 80 3L 21066243 21066323 ATCCGATACGATCTTCGTCC 59 21066365 21066384 CGTTCTGGCTTTAGATTGGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 CG4289 FBgn0037020 FBtr0078251 2 1 1 82 3L 20772436 20772457 GATCAGGGAAATCATCCATTCG 59 20772500 20772790 GCGCAATGTATTGCTTCCA 59 NA Drosophila melanogaster 61 CG4186 FBgn0040634 FBtr0078246 3 1 1 179 3L 20762775 20762846 CCTGCCTAAAGGAACAGGA 59 20763045 20763063 CATCGCGTTCTTCTAAGGG 58 NA Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078199 1 1 2 80 3L 20467726 20468671 CTGGTGGATATTCCTAAGATATCCT 59 20468706 20468727 ATCGGATAGATTGCTGTACTCC 59 NA Drosophila melanogaster 61 CG6663 FBgn0036969 FBtr0074843 3 1 1 110 3L 20314992 20315010 CTTGAGAAACTCGAGGCCT 59 20315083 20315159 TAGTCCAGCGTCATATACGG 58 NA Drosophila melanogaster 61 CG7328 FBgn0036942 FBtr0074864 1 1 1 60 3L 20133007 20133027 GACCACCTATGAGGACTTCAG 59 20132967 20132985 CTCGAAGTGTACCCATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8004 FBgn0036920 FBtr0074915 1 1 1 82 3L 19921370 19921461 TCTACCAGCCGTATGAAGC 59 19921306 19921324 GCACATCTTCAGGTAAGCC 58 NA Drosophila melanogaster 61 Oat FBgn0022774 FBtr0074961 2 1 1 110 3L 19640643 19640718 TAACCAGAAGTTCGATGCCT 59 19640552 19640570 TTGATGACCAGTGGAGGAG 58 NA Drosophila melanogaster 61 CG12519 FBgn0036872 FBtr0074930 1 1 1 96 3L 19465639 19465714 CATAATGTTCAAATCCGCCGT 59 19465772 19465790 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 MESR6 FBgn0036846 FBtr0075026 2 1 1 86 3L 19086413 19086775 TTATGCAGGACATTTCAACCG 59 19086823 19086841 CCAACCTTAAAGTCGTGCC 59 NA Drosophila melanogaster 61 CG6843 FBgn0036827 FBtr0075067 1 1 1 127 3L 18894841 18894860 GCTTCAACAACTACATGTGC 58 18895028 18895046 ATACTGGTTGCGTAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Cat FBgn0000261 FBtr0075058 1 1 1 102 3L 18820346 18820461 CTACTTTGCTGAGGTGGAG 57 18820527 18820545 GTAGGAGAACAGACGACCA 58 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 2 1 1 94 3L 18286583 18286602 AAGGGAAAGGACTTTCTGGG 59 18286444 18286527 ATCTGCAAATGCTTGATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32193 FBgn0052193 FBtr0075145 1 1 1 194 3L 17954849 17954867 TATGGTATCGGATTTGCCC 57 17957923 17957942 GAATGTTTCAAACTGCTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG7497 FBgn0036742 FBtr0300284 3 1 1 140 3L 17629625 17629802 TCTACCACAAGCACATTACCT 59 17629904 17629922 TACACTTAAGCTGGTCCGG 59 NA Drosophila melanogaster 61 tap FBgn0015550 FBtr0075216 2 1 1 60 3L 17353489 17353507 GCACAACTACATCTTTGCC 57 17353530 17353549 ATCCAGGTTGATTGAACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sinah FBgn0259794 FBtr0301683 3 1 1 60 3L 16852938 16852956 CGTATCCGGATGACAAGTG 58 16852979 16852998 ATCAGGTGCTGGTATACGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13031 FBgn0036655 FBtr0075319 1 1 1 91 3L 16717993 16718067 GCAGCAAATGTTGATTCTCG 58 16718121 16718139 TAGAGGCCGAAGGAAACAG 59 NA Nonspecific Drosophila melanogaster 61 CG13038 FBgn0040795 FBtr0075429 3 1 1 101 3L 16320824 16320842 CTTGGATCGATACCATGCG 58 16320614 16320632 AATCGATGAGCAGACGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5018 FBgn0036578 FBtr0075484 2 1 1 60 3L 16219690 16219708 CAAGACGACTCTGTCACGA 59 16219420 16219438 AAGTTCGTTAGGGCTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS31 FBgn0036557 FBtr0075519 1 1 1 102 3L 15998859 15998877 GGAAGCGAGTCCTCTTCAG 59 15998937 15999027 CCACGATAATATCACTCAGATTGAG 59 NA Drosophila melanogaster 61 CG10516 FBgn0036549 FBtr0075512 3 1 1 142 3L 15962651 15962734 AAGTACCGAGAAACCGACG 59 15962840 15962858 TAGTGGAAGTACTCGTCGC 58 NA Drosophila melanogaster 61 CG6114 FBgn0036544 FBtr0089527 3 1 1 80 3L 15897346 15897425 AAATTCCAGGTTGACATCAGTG 59 15897287 15897307 TAGCAGCGTAAATGTCAAAGC 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540,FBtr0100528,FBtr0075539,FBtr0075538 1 4 4 80 3L 15816272 15816355 TTGTTCCAACACATTCCCT 57 15816210 15816230 TAGCTTGTAGTTCTTCCACTC 57 NA Drosophila melanogaster 61 CG7372 FBgn0036522 FBtr0075570 2 1 1 115 3L 15614597 15614615 AGTTGGACAAGAGTGAGGC 59 15614694 15614770 ATTGGTGGGTTCCTCTGTC 59 NA Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299850 2 1 2 96 3L 15640343 15640362 TAAATCAGGCGGAACAAGGT 59 15607089 15607107 ATCTCGATCGTGGGATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 2 2 2 89 3L 15529542 15540981 CCGACTTAGATCCGGAATCC 59 15541033 15541051 TGACGGTGGGATCTTTGAC 59 NA Drosophila melanogaster 61 CG13471 FBgn0036443 FBtr0075709 2 1 1 60 3L 14726505 14726523 TGCAGAGGTAGAGTTGGAC 58 14726463 14726481 CGAAGCGAACGATAGAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075680,FBtr0075679 3 2 2 85 3L 14660500 14660578 GAAGAAGGTCCTCAATGTGC 59 14660625 14660644 TATATCCCTTGCAAGCACCA 59 NA Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743,FBtr0075742 2 2 2 128 3L 14268711 14268729 CTACCCGTAAACACCAGAC 57 14268821 14298009 AGTCATGCAGATCCTTTCC 57 NA Drosophila melanogaster 61 nan FBgn0036414 FBtr0089524 2 1 1 85 3L 14181472 14181490 CAACGGAAACACCGTTCTC 59 14181347 14181425 GTATGTTTGTTCCAACCTCGT 58 NA Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 3 2 2 114 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075457 14075480 TAGTACTCCGTATCTTGGATATCC 58 NA Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 2 2 2 60 3L 14045080 14045100 CCATGACATTCGTGATACGTC 59 14045118 14045140 GTGGGTATTAGAGATGAGTTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17359 FBgn0036396 FBtr0075787 1 1 1 60 3L 13991986 13992007 GAAGGAGCTGGACGATATAGAG 59 13991947 13991969 CATCTGTGGTTCTATGTTATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075762 3 1 3 154 3L 13967730 13967748 CTTTCAGCATGGCAAGGTG 59 13967866 13969025 GCTTGGCATCAAAGATCGT 58 NA Drosophila melanogaster 61 CG14107 FBgn0036351 FBtr0075866 2 1 1 106 3L 13374353 13374372 TTAGACCCATTTACCTGGCC 59 13374203 13374221 GACGGCTAACTCCTCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14111 FBgn0036350 FBtr0075841 2 1 1 62 3L 13372676 13372694 CTTCCTTAAGCAACAGCCC 58 13373098 13373116 TGAGATTCAGGCTTCTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG10681 FBgn0036291 FBtr0075957 2 1 1 98 3L 12495015 12495033 TGTGGAGACCATGATACGG 58 12495151 12495169 AAACGACTCTGCGATAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Pbgs FBgn0036271 FBtr0076011 3 1 1 60 3L 12263571 12263589 TCCTATCCGTATCACACGC 59 12263529 12263548 GATACAGCATAGCGAACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eap FBgn0052099 FBtr0076000 1 1 1 60 3L 12142917 12142941 GAGGAATGGAGTTATATTGGAAGAC 59 12142959 12142977 TAAAGGCCTTCACCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42397 FBgn0259748 FBtr0300506 3 1 1 91 3L 11966870 11966888 GTTCTACTCTGTCGGAACG 57 11966742 11966760 ATCCACTTACAAGGAGTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rpt4R FBgn0036224 FBtr0076040 1 1 1 84 3L 11935812 11935904 TTTCTTGAAGGTCGTTTCCTC 58 11935950 11935968 GGCGTATGCAAACATCTCC 59 NA Drosophila melanogaster 61 CG14127 FBgn0036219 FBtr0076037 1 1 1 83 3L 11875045 11875144 CAACAGGAAGCTCGTATGC 59 11875191 11875209 TTCTTTCGAATGTGCTCCG 58 NA Drosophila melanogaster 61 CG5906 FBgn0036217 FBtr0076071 2 1 1 60 3L 11863828 11863850 CGCAATACAGGGTATTCTATGAC 59 11863790 11863812 TGAGACGTATAGATATCGTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 2 4 4 81 3L 11780326 11780346 GGAAACAATGGTCATTCCTCG 59 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 CG14132 FBgn0040817 FBtr0113334 2 1 1 175 3L 11708140 11708158 CAGCAATTTACTCCCAGCC 58 11705820 11705838 CACATAGGGACAGGTCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14132 FBgn0040817 FBtr0113334 1 1 1 174 3L 11708140 11708158 CAGCAATTTACTCCCAGCC 58 11705821 11705839 ACATAGGGACAGGTCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Sgs7 FBgn0003377 FBtr0076095 1 1 1 173 3L 11503016 11503100 CATCATCGCTTGCATCCTG 59 11503237 11503255 CATTTCCGGATCTTCTGCT 57 NA DesignRelaxed Drosophila melanogaster 61 Or67c FBgn0036078 FBtr0076300 2 1 1 81 3L 10236938 10237018 CAAGTGCCTTAAACTATGCGA 59 10236877 10236895 CTGCATGGATGCCATAAGG 58 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 1 2 2 80 3L 10090895 10090913 ACCAGGAGGATGCTTTCAG 59 10090284 10090854 GAGATAAAGATGAGACCAGCTG 58 NA Drosophila melanogaster 61 CG32054 FBgn0052054 FBtr0076314 2 1 1 83 3L 10087064 10087154 CCAAGAAGTATGTCTTGATCTTCAG 59 10087005 10087027 CATCGCCACTATTCTTTGTACTG 59 NA Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 3 2 2 298 3L 9851661 9851680 CTCATCTTACGCTACATGGT 57 9851108 9851126 TTGTCACAATGCCAACTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pall FBgn0036005 FBtr0076471 3 1 1 84 3L 9480577 9480595 ATCATTATGGCCCATGCCA 59 9480442 9480530 ATAGAATGTGGTTCCTGCGT 59 NA Drosophila melanogaster 61 Jarid2 FBgn0036004 FBtr0076468 1 1 1 80 3L 9478084 9478167 AGATGATTTCAGGGACATTCAC 58 9478207 9478226 TCATAACCCAAGGCAAAGAG 57 NA Drosophila melanogaster 61 CG32039 FBgn0052039 FBtr0076441 3 1 1 82 3L 9352445 9352463 CAAAGAGCGGAGGAAATGC 59 9352506 9352586 CTAGTTTGCCACCTAAGATTGG 59 NA Drosophila melanogaster 61 nwk FBgn0035966 FBtr0076532 2 1 1 82 3L 9131790 9131884 CGCGTAAGGGAAACTATGTG 59 9131927 9131947 TTCATGCTGATTCTTCAGCTG 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076544 1 1 6 171 3L 9055562 9055927 GTGCCTATAGTTAAAGCAAACG 58 9055412 9055430 TCTGGTTTAGGAGCAGGTG 59 NA InUTR Drosophila melanogaster 61 CG13308 FBgn0035932 FBtr0076581 1 1 1 60 3L 8802071 8802089 GTGACGGTAGTGGTACTGG 59 8802112 8802131 ATGGAACAATAGGTGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5989 FBgn0017429 FBtr0076649 3 1 1 80 3L 8596058 8596079 TCGATGTCAAAGACATATTCGC 59 8595938 8596020 GGTTGACTAGGTTTCTAACGTG 59 NA Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 3 1 1 71 3L 8592864 8592947 AGTCTGGTCATCTATTGCCG 59 8592812 8592830 TATTGAACCATCTCGCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 2 2 2 69 3L 8397145 8397215 TTAGCACTGAAGGAGAGCG 59 8397094 8397112 TATGGAACAATGGTGGCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sbp2 FBgn0087039 FBtr0076707 1 1 1 125 3L 8297670 8297688 GAATGCTATTCCGCTGGAG 58 8297774 8297856 TCACAATAGCTTCTAAATCGCC 59 NA Drosophila melanogaster 61 eIF4E-3 FBgn0035860 FBtr0076701 3 1 1 80 3L 8223294 8223371 AATAAGCTATCCCTTTGGACG 58 8223413 8223431 CAGCAGCTCCTTTATCTGC 58 NA Drosophila melanogaster 61 CG7375 FBgn0035853 FBtr0076722 2 1 1 97 3L 8189972 8190249 TATTCTTGGAACCCAATCCC 57 8189894 8189914 CGCCTTCTTTACATTGTTCTC 57 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 3 2 2 70 3L 8177527 8177601 CTAATGGGCATGCTCAAGG 58 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 1 2 2 69 3L 8177526 8177600 TAATGGGCATGCTCAAGGA 59 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 3 2 2 80 3L 7755269 7755287 GTGGACAACTGTGGATTCC 58 7755331 7755407 GAAACCTGTGCAATCCCTC 58 NA Drosophila melanogaster 61 CG7716 FBgn0035800 FBtr0076824 2 1 1 60 3L 7582207 7582227 CAATCTTTGACCTTAACGGTG 57 7582167 7582188 CCAATTTGTTTAGTACCTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp316a1 FBgn0035790 FBtr0076790 3 1 1 80 3L 7486191 7486286 TCCATACAATGCAGAACTTCC 58 7486327 7486346 GGATATCGAACCTCATTGCG 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0076861 1 1 3 104 3L 7461113 7461131 GAGGACCTGTACCGATCAG 59 7461194 7461276 GGAATACCTCAATGCATATGACTG 59 NA Nonspecific Drosophila melanogaster 61 Neos FBgn0024542 FBtr0076835 2 1 1 97 3L 7235309 7235327 GTGGACTTGTGATGTCAGC 58 7235387 7235469 TGCGTATTTGGTATTCTCGC 58 NA Drosophila melanogaster 61 ndl FBgn0002926 FBtr0076984 2 1 1 81 3L 6587928 6588010 CACATATCTGCAAGCCACTG 59 6587866 6587884 TACTGAACTCTCGTCGCTC 58 NA Drosophila melanogaster 61 CG14911 FBgn0035701 FBtr0076966 1 1 1 90 3L 6477655 6477797 GTGGCGAGAAATACAATTACC 57 6477847 6477867 GACAGATCCGAATAGTAAGCA 57 NA Drosophila melanogaster 61 CG14910 FBgn0035700 FBtr0076965 1 1 1 63 3L 6454911 6454929 GCATTGGCTATAATCCGCT 58 6454956 6454974 AAGGTGTCCACTTCGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp65A FBgn0259969 FBtr0300314 2 1 1 60 3L 6343462 6343482 ATCAGAAAGATGACAGTGCCA 59 6343502 6343522 GTGTTTACCGTTATAGCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10163 FBgn0035697 FBtr0077009 3 1 1 87 3L 6250836 6250911 TTCATGGAGGCTCTCATCG 59 6250767 6250787 GGAAATTACAATCGCCCTGTC 59 NA Drosophila melanogaster 61 Best2 FBgn0035696 FBtr0077010 1 1 1 80 3L 6244726 6244748 GATATTCGTAGACGTTTAGGTGG 58 6244588 6244686 CAGGGTGACTACCTGAGTG 59 NA Drosophila melanogaster 61 Lcp65Ag3 FBgn0086611 FBtr0077061 3 1 1 80 3L 6123844 6123924 AGCTTCAAATACGACTGGGA 59 6123783 6123802 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 3 2 2 195 3L 5927082 5927165 TACAAGATAAAGGGCTTCACCA 59 5926908 5926926 TCAGCGAGCCATACATCTC 59 NA Drosophila melanogaster 61 CG10483 FBgn0035649 FBtr0077077 2 1 1 81 3L 5911514 5911532 GCATCTAAACAACGTGGGC 59 5911257 5911469 AATCGTGGTCTGATCCGAG 59 NA Drosophila melanogaster 61 CG32412 FBgn0052412 FBtr0077080 1 1 1 80 3L 5894644 5894903 GACTTATGCTCATATTCTTCGATGG 59 5894588 5894610 GATGCTTTGATCCGTATACAGAG 59 NA Drosophila melanogaster 61 Ir64a FBgn0035604 FBtr0077153 2 1 1 80 3L 5372014 5372094 GACCTGCATGTTGACATGG 59 5371952 5371972 CAGTATCATAAGGGTGATGGC 58 NA Drosophila melanogaster 61 CG13720 FBgn0035555 FBtr0073327 3 1 1 60 3L 4499698 4499718 GCAACACAATATCTACCCGAC 59 4499658 4499679 TGCAAATTGATGACCTCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 3 6 6 205 3L 4418980 4418998 GCAACTATCTGCAACGCTC 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073342 1 1 3 104 3L 4299417 4299438 AAACTACAAACACTGAGCTCTG 59 4298761 4299352 GGTGTGGCGTGTTTAACAG 59 NA InUTR Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 1 1 1 114 3L 4292741 4292850 GTTGTTAACATAACCTTCGTGC 58 4292925 4292943 CGAAACCATCCAGATCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 1 2 2 83 3L 4291805 4291887 GAAGGGAGAACATATTTCTGATGAG 59 4291746 4291764 ATTAGGAAGCCCACAAGCA 59 NA Drosophila melanogaster 61 CG1134 FBgn0035483 FBtr0073193 1 1 1 80 3L 4022490 4022508 GAGTCGTCCTCACACTCTG 59 4022549 4022837 CATGGCAGTAGGATAATCTCCT 59 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073168 2 1 3 75 3L 3959967 3959987 GGATAGTATTCAGCCCATGGA 59 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32269 FBgn0052269 FBtr0100678 1 1 1 60 3L 3207661 3207680 TACCACTATTTCCACCACAC 57 3207620 3207639 GCTACACAGATTCGATCCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32281 FBgn0052281 FBtr0073034 3 1 1 60 3L 3170141 3170160 GTGGAAACTAAGGAGAACGG 58 3170182 3170201 GATTCCAGTACACCTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9965 FBgn0035381 FBtr0072976 1 1 1 131 3L 2955728 2955746 ATTAAGCGGTCAAGGACCC 59 2955841 2955924 CTCTCGAACTTGGCTTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG9977 FBgn0035371 FBtr0073016 3 1 1 60 3L 2770488 2771282 ATCTACTCCACGCAGAACG 59 2770446 2770464 CAAAGATCGGGATTCCGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG12187 FBgn0035367 FBtr0072945 1 1 1 99 3L 2673137 2673155 TTCGATGAGAACCTACCGC 59 2672885 2673074 TTTCGGGTTCCGCTATGAG 59 NA Drosophila melanogaster 61 CG14950 FBgn0035364 FBtr0273408 2 1 1 80 3L 2658367 2658486 AGAGGTGGAGCTAATCTGC 58 2658305 2658324 ATGTAGCACTTCACGTACGT 59 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127,FBtr0072886 3 2 2 60 3L 2299267 2299775 AAGCTGAGTGACCTTATGGA 58 2299797 2299816 ACAGGATGAAGTTGATGCTC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG5707 FBgn0026593 FBtr0072912 1 1 1 216 3L 2191940 2191958 CATCGAGACGCATGAACAG 59 2190213 2190231 CTTCGAGGAGTATCCGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL46 FBgn0035272 FBtr0072776 2 1 1 61 3L 1777726 1777744 AAGCATGAACGTGAGATCG 58 1777769 1777787 AAGTCCACCTGGATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12011 FBgn0035257 FBtr0072764 1 1 1 80 3L 1694630 1694723 GAAACCCTCATCATGCATTCTC 60 1694763 1694782 CTGTTCTAGAACTCTGCCCT 59 NA InUTR Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 2 2 2 80 3L 1644054 1644073 GCGCTTCTGGATACTTACAG 58 1643937 1644014 AGTTTAAAGACCACCATACCTC 57 NA Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 2 2 2 77 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562935 1562957 ACCTGGATCTCCATTAGTTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 dpr20 FBgn0035170 FBtr0072594 3 1 1 82 3L 853837 853914 ACGTTAATGCTCCGAAAGTG 59 853774 853792 TAGCGTGGAATCGATCTCG 59 NA Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 3 2 2 80 3L 364838 364858 AAGGAGAGTAAACGCTACTCC 59 364900 364979 GGTCTGAAGGTGTATCCGA 59 NA Drosophila melanogaster 61 snoRNA:U29:54Ed FBgn0063382 FBtr0086849 1 1 1 60 2R 13588488 13588508 GATGAAACATTTACCCAGCTC 57 13588527 13588548 CGTTGGATATGGAACAGTTCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-C1366 FBgn0082951 FBtr0113501 1 1 1 61 2R 10509314 10509332 AAGAGTCGAGTGCCAAGTC 59 10509353 10509375 GCCGTTCTTATTCTTTCTACAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a14 FBgn0033302 FBtr0302331 2 1 1 87 2R 4452268 4452343 CAAGTGCTGTCGGAAACTC 59 4452199 4452220 CTGAGTTGGGAATTTGGTAGTC 59 NA Drosophila melanogaster 61 CG3589 FBgn0035065 FBtr0072375 1 1 1 82 2R 20672710 20672731 CTACCCAAACATAAATACAGCC 57 20672774 20672843 CATTTAAGTCGTTGGTGCG 57 NA Drosophila melanogaster 61 Cpr60D FBgn0050163 FBtr0072334 3 1 1 154 2R 20550894 20550914 GATTGAAACCCGTTTAGTGGG 59 20550702 20550720 CAGATCCTCCTCACTGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpS17 FBgn0034986 FBtr0072277 1 1 1 92 2R 20061854 20061872 CTACTAATGGGCCAGTGCA 59 20061716 20061803 GTACATATTCAGGTTCTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 gek FBgn0023081 FBtr0072287 3 1 1 80 2R 19984982 19985001 TCGTTCTCTATGACGAGTGC 59 19984858 19984941 AGGGTTTGGATAGTTTGAGGA 58 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 3 2 2 101 2R 19971097 19971185 TCCAGCCTTTGAACTTAAATCC 59 19971247 19971265 TTGATGCCGACATTCTCCT 59 NA Drosophila melanogaster 61 CG3173 FBgn0034964 FBtr0072168 1 1 1 91 2R 19927935 19928010 GAGTTGCAGATAATAACCATGG 57 19928062 19928080 TCAGTGATAACAGCATGCG 58 NA Drosophila melanogaster 61 CG3860 FBgn0034951 FBtr0072201 2 1 1 80 2R 19881989 19882071 CAGAGCATGTGGAAAGAACTG 59 19881929 19881947 AGTTCTTCAGAATGGCCCA 59 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 1 3 3 80 2R 19616740 19618435 TACTACTTGGCCATAATTGCTG 58 19618474 19618494 CTGGTTGATGAACTCCTTCTC 58 NA Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 2 1 1 61 2R 19492460 19492604 CAAGCCAATCCAACTGCTG 59 19492417 19492437 AAGAACTGTTGTGATGCTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 yellow-d FBgn0041712 FBtr0072011 2 1 1 151 2R 19266794 19266866 TTCAGAGTGGCTATCACCG 59 19266981 19266999 ATGTATGTGTCGTTCGGGA 58 NA Drosophila melanogaster 61 CG13538 FBgn0034820 FBtr0071966 2 1 1 60 2R 18975236 18975254 TTGCTGGGAACTTCAACTC 58 18975275 18975296 GAATGGCGAACATTAGAAACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 2 1 1 98 2R 18964558 18964631 CAGCATTGAGCTCAAGCAC 59 18964478 18964497 CTGCTTACAATGGATCTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2852 FBgn0034753 FBtr0071933 1 1 1 157 2R 18533526 18533544 TTTGACATCACCATTGGCG 59 18533001 18533019 AAGTCCTTGATGATGCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 1 1 1 60 2R 18010962 18011042 GATAGAAGAGCCAACAAGCC 58 18011063 18011083 CATCAAACACTAATTCCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Grx-1 FBgn0034658 FBtr0071714 3 1 1 61 2R 17645264 17645282 TCATCGATGGCAAGTTCGT 59 17645306 17645325 TATGCCCTGTTCGTATAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071747,FBtr0071746 1 2 2 150 2R 17606654 17606672 CATGCCACCCAATATGTGC 59 17605138 17605156 CATCCAGGTTGTTGTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9437 FBgn0034599 FBtr0071575 2 1 1 60 2R 17056859 17056880 ATGAAGGTTGATTTACAGCGAC 59 17056898 17056919 TCAAGGTCTCTGTGTCAATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9418 FBgn0026582 FBtr0071573 3 1 1 64 2R 17034169 17034187 AAGTTGCCCTACATCGAGG 59 17034273 17034292 AACATTTGCAACTGCTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 1 1 1 281 2R 16947946 16947964 CTCAAGTTTCCGTCGAACC 58 16947626 16947701 TCCTTTATCCTTGCTGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 2 3 3 88 2R 16891592 16891668 GCGATCAGACCTTCAAGTG 58 16891720 16891738 CTTTCCCTTCTTAGGCGGA 59 NA Drosophila melanogaster 61 CG15226 FBgn0034550 FBtr0071564 3 1 1 90 2R 16679185 16679203 GGTACGGAATCTGATGTCC 57 16677664 16679131 AAATCCGATCTGCCATTCG 58 NA Drosophila melanogaster 61 CG15226 FBgn0034550 FBtr0071564 2 1 1 90 2R 16679174 16679192 TGATGTCCACCAAATCCCA 59 16677653 16679124 GAACACAGTAGAAATCCGATCTG 59 NA Drosophila melanogaster 61 Gr57a FBgn0041240 FBtr0086241 3 1 1 102 2R 16573351 16573369 CGAATCCCTAATGTCGTGG 58 16573212 16573288 CAGAATCGATGTAAACAAACCG 58 NA Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 1 2 2 80 2R 16156557 16156629 ACATTGGATCTCAATCCTTTCG 58 16156670 16156688 GATCATGCGGAAGATGCTG 59 NA Drosophila melanogaster 61 ppk6 FBgn0034489 FBtr0086321 1 1 1 80 2R 16133518 16133538 GTCTATTTGGCCAAACAAGTG 58 16133405 16133478 ACCCAAATCCGATAATAGTCC 57 NA Drosophila melanogaster 61 CG11041 FBgn0034481 FBtr0300692 3 1 1 93 2R 16034136 16034154 GAAATGGACGAAATGTGGC 57 16034208 16034290 CTTACAGATAGACCATGAGCTG 58 NA Drosophila melanogaster 61 18w FBgn0004364 FBtr0086309 1 1 1 60 2R 15999396 15999415 GCCACATCTTCCATCATCAC 59 15999438 15999456 CAGCCACAAGAAGCAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or56a FBgn0034473 FBtr0086344 3 1 1 80 2R 15657821 15657905 GTGGAGGAGATGGATATTACC 57 15657761 15657780 TTGCCAGAAGGTTAACTCAC 58 NA Drosophila melanogaster 61 DptB FBgn0034407 FBtr0086621 1 1 1 118 2R 14754939 14754962 GCTAGTCTTCTATTCATTGGACTG 59 14755038 14755113 AAATTGGGAGCATATGCCAG 58 NA Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 3 2 2 127 2R 14685320 14685338 GAACCACATCGATCTGTCC 58 14685151 14685229 TTACGCTTGTCTCATCGAC 57 NA Drosophila melanogaster 61 Cyp12b2 FBgn0034387 FBtr0086609 3 1 1 86 2R 14643155 14643175 GGAGAGCTTGAACTACTATCG 57 14643223 14643299 CATTCCTGACCCTGATCAG 57 NA Drosophila melanogaster 61 GstE5 FBgn0063495 FBtr0086673 2 1 1 60 2R 14292716 14292735 AGAAGCTGCCTTACTACGAG 59 14292758 14292776 AGAATGGTCTCCAACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614,FBtr0086798,FBtr0086797,FBtr0086795 2 4 5 258 2R 13745256 13745274 TAAAGGCATCCAGCAAGAC 57 13746956 13746974 ATGTACCAATGGAGACGCT 58 NA DesignNoJunction Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299707,FBtr0300541,FBtr0300540,FBtr0299706 1 7 7 94 2R 13722164 13723261 AAAGGGAGTTAAGGGCCTG 59 13723319 13723337 TTATCTGACAGTAGCCGCG 59 NA Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 2 1 1 82 2R 13613261 13613279 AAAGTGCAAACTGGTTCGG 59 13613137 13613215 AAATTGCACGACACTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42561 FBgn0260763 FBtr0301265 3 1 1 90 2R 13572524 13572544 ATTTCACCAACTATCGTTCCG 58 13572596 13572673 CCGGATGTTCGATTCTGAG 58 NA Drosophila melanogaster 61 CG14482 FBgn0034245 FBtr0086905 1 1 1 80 2R 13460024 13460172 AGATAGCGAGTTCCTTCATCC 59 13459964 13459983 TCCAGTCGGTGTAGTAAAGC 59 NA Drosophila melanogaster 61 POSH FBgn0040294 FBtr0086828 1 1 1 91 2R 13459261 13459340 ACGAGGGAAAGTCGATTCC 59 13459394 13459413 TGGACGTAGATAATGTCGCC 59 NA Drosophila melanogaster 61 CG30457 FBgn0050457 FBtr0086998 3 1 1 75 2R 13048208 13048288 GAAATTCCTGGTTGTCGCC 59 13048151 13048169 ATAGTTGTAGCCCGACAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 2 3 3 80 2R 12541203 12541223 CACATTGATTACGACGTACAG 57 12541077 12541164 TAAGCCCGAATAGAACTTATCG 57 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 1 3 3 80 2R 12454482 12455295 GTTCGAATTGGAGAAGATCCAG 59 12455335 12455354 AGAATCTTCCCGAACCATCC 59 NA Drosophila melanogaster 61 CG7848 FBgn0034127 FBtr0087160 2 1 1 60 2R 12322276 12322294 GGTGTGATAGTGTGCAACC 58 12322234 12322253 AGAACAGGAATACGTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7786 FBgn0034096 FBtr0087190 3 1 1 60 2R 12122074 12122092 ATGCCAAGTACTTTGAGCG 58 12122032 12122050 GCATCTCTGGACCTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219,FBtr0300575 1 3 3 80 2R 11999420 11999494 GACTGGAGGATCTGGACAC 59 11999538 11999556 CATCTCGATGTTCGTCCAC 58 NA Drosophila melanogaster 61 SP2353 FBgn0034070 FBtr0087209 1 1 1 80 2R 11930758 11930776 CATTCCCTCAGTCTGGGTC 59 11930818 11930898 ATGTTTATCCACCTTGAGCAC 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302795,FBtr0302788,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 2 7 13 80 2R 11873030 11873048 CGACCTATCCGTCAAAGTG 58 11872862 11872989 TACCAGGTTAGCTTAAGATCTG 57 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 2 2 2 73 2R 11575757 11575780 GCTCAATATAACACAGAGTTCGAG 59 11575643 11575725 AGCAGCTTTGTGTTCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 1 1 1 68 2R 11461003 11461021 GAACCTACGCTTCATGTGC 59 11460895 11460973 TTCTAGTTGCTGGAGCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 2 2 2 81 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454668 11454757 GAATCCTGATCGATTCAGCC 58 NA Drosophila melanogaster 61 Mtk FBgn0014865 FBtr0087386 1 1 1 74 2R 11296437 11296455 TACATCAGTGCTGGCAGAG 59 11296493 11296511 TTAGGATTGAAGGGCGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arc1 FBgn0033926 FBtr0087560 3 1 1 60 2R 10247468 10247487 TGTAGAAGGTATCAGCGACG 59 10247427 10247445 CATACCGTAGAACAGCAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30482 FBgn0050482 FBtr0087602 2 1 1 289 2R 9888342 9892326 AAACAGATGTCGTCGTTGC 59 9885170 9885188 TTTGGAATCAAGACCCACC 57 NA DesignRelaxed Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 2 2 2 103 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459375 9459396 GTTCCTAATGCGATTATCAGCC 59 NA Drosophila melanogaster 61 CG4688 FBgn0033817 FBtr0087744 3 1 1 76 2R 9127904 9127922 ATCATGGAGCGTTACCTGG 59 9128054 9128072 GTCACGATGGATAAGTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 3 2 2 81 2R 9089462 9089480 CACGGAGGAACTTTACCAG 57 9089524 9089607 GGATGTATTGCTGGGATAGC 58 NA Drosophila melanogaster 61 CG13324 FBgn0033789 FBtr0087796 1 1 1 62 2R 8936958 8936976 AACGTGAACGTGAACTACC 58 8936914 8936932 GTTGTCGTACACGATCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-asp FBgn0002069 FBtr0087784 3 1 1 80 2R 8768764 8769017 GTCAAATTTGCGGGAAATATCC 58 8769057 8769076 TTCAATCTTGCTAGACACCG 58 NA Drosophila melanogaster 61 CG13157 FBgn0033732 FBtr0087925 1 1 1 80 2R 8304369 8304671 CGGCAGATGCTATTGATGC 59 8304715 8304733 GATTCTGGTAGCCACCAGG 59 NA Drosophila melanogaster 61 CG8321 FBgn0033677 FBtr0087975 1 1 1 81 2R 7921923 7922996 GCGTCATCTTAACGATGCC 59 7923040 7923059 GTCTCGTTCCACCTACTCTG 59 NA Drosophila melanogaster 61 ERp60 FBgn0033663 FBtr0088058 2 1 1 80 2R 7776003 7776087 GAGAACTTCCATGGTCTTGTG 59 7775943 7775964 GTAGTAGGCAGTGATCAAAGGA 59 NA Drosophila melanogaster 61 CG42493 FBgn0260007 FBtr0300507 3 1 1 81 2R 7666500 7666577 ATCCTTAGAATAATTGCCCTCG 58 7666619 7666637 ATTCCTCCTGAGACTCAGC 58 NA Drosophila melanogaster 61 CG18336 FBgn0040763 FBtr0088175 2 1 1 179 2R 7181687 7181766 CCTATTCCAGCCGATTTGG 58 7181526 7181544 GTGGAATCATGCCTACCAC 58 NA Drosophila melanogaster 61 CG9067 FBgn0033605 FBtr0088182 2 1 1 80 2R 7166601 7166621 AATCTCCACTTGCTCTACACC 59 7166477 7166562 ATCGAACTTCTTTGAAGTCAGC 59 NA Drosophila melanogaster 61 Cpr47Ed FBgn0033601 FBtr0088188 1 1 1 104 2R 7149176 7149291 TCGCATTGCTATTGATCTTGAC 59 7149093 7149111 GTTCGGTCACCGATTTGAG 59 NA Drosophila melanogaster 61 CG34225 FBgn0085254 FBtr0112418 1 1 1 60 2R 7133048 7133066 ACACTAGATGACGTGGCTG 59 7133090 7133108 TAGCTGGTCTATTGCCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 luna FBgn0040765 FBtr0088210 2 1 1 89 2R 6878625 6987051 GATCAATGGCAACAGACCTG 59 6878555 6878573 ATTGTCCAGATTGCTGTGC 58 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 3 2 3 81 2R 6773587 6773606 CTATTGAGTCCGGAATGCAC 58 6773647 6773726 CATTGGGATAACACTTAGAGGG 58 NA Drosophila melanogaster 61 Caf1-105 FBgn0033526 FBtr0088310 1 1 1 80 2R 6355293 6355370 GCACCGATAGACAAATGCG 59 6355231 6355252 TTACTGGGAGTACACATTTGCT 59 NA Drosophila melanogaster 61 Prx2540-2 FBgn0033518 FBtr0088259 2 1 1 71 2R 6306767 6306785 CAGTCCGGACCATAAGGTG 59 6306820 6306901 AGAATCTCGTCAACGTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Gr47a FBgn0041242 FBtr0088352 2 1 1 84 2R 6250724 6250936 CTTGGATCGTTTGCTCTCC 58 6250982 6251002 GTCAAAGGTAAACACGTTGAG 57 NA Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088411,FBtr0088410 1 2 2 114 2R 5984631 5984753 TTCCCACCCACTGATTGAC 59 5984830 5984849 GATCTGAATGGCAGTTGCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Cyp4p2 FBgn0033395 FBtr0088591 2 1 1 80 2R 5125195 5125213 TTAGTGCCCATGATCAAGG 57 5125255 5125355 AGTAAATACCTGGTCAGTGTC 57 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 1 3 3 85 2R 5076504 5076583 GTACTTCATGTTCTACAACACC 57 5076440 5076458 CAAGCATGTTCATTGTGGG 57 NA Drosophila melanogaster 61 lin FBgn0002552 FBtr0088651 3 1 1 144 2R 4802503 4802580 GGGTTTGTAGACCATTTGCAG 59 4802686 4802704 CTGTTCGTTTGATGCGGAG 59 NA InUTR Drosophila melanogaster 61 CG8693 FBgn0033294 FBtr0088748 3 1 1 83 2R 4347505 4347609 AACTGGGTGATCGGTAACC 59 4347655 4347674 AAGCAGGATGTTGAAGAGGT 59 NA Drosophila melanogaster 61 Cyp4e1 FBgn0015034 FBtr0088746 1 1 1 81 2R 4336625 4336701 GAAGGACTACGTAATTGATGGTG 59 4336736 4336760 GTCATTGTATCCCAACATAAGAAGG 60 NA Drosophila melanogaster 61 CG33087 FBgn0053087 FBtr0088791 3 1 1 83 2R 4110982 4111001 TACTTGCTGAAGGGCTATCG 59 4111043 4111132 GGCGCAAGGATTACTTATATTCC 59 NA Drosophila melanogaster 61 Rs1 FBgn0021995 FBtr0088788 2 1 1 86 2R 4053359 4053377 GACATTGTCATTGCAACGC 58 4053424 4053629 AATGAGAACCTCAATGGAATCC 58 NA Drosophila melanogaster 61 CG30373 FBgn0050373 FBtr0088806 1 1 1 290 2R 4052110 4052128 TGCTTGAGTTTCCCATCGA 59 4051777 4051795 GTACAGGAGGAAGATGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30377 FBgn0050377 FBtr0088844 3 1 1 111 2R 3794848 3794866 GAGATGTACTACGGCACCA 58 3794941 3801871 GCGAGGATGGATAGGACAG 59 NA Drosophila melanogaster 61 CG1550 FBgn0033225 FBtr0088899 3 1 1 60 2R 3698327 3698347 CTTACTACCAAACGAGAGCAG 58 3698287 3698306 TTCCAGGGCTTGATAATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 3 3 3 117 2R 3689615 3689695 AAGTGTTCCGACTCGACTC 59 3689516 3689534 TCGTAGTCGACAGAATCGC 59 NA Drosophila melanogaster 61 Inos FBgn0025885 FBtr0089329 2 1 1 110 2R 3343264 3343348 CTCCAAGGAGATTTCCAAGAG 58 3343174 3343192 GGCACGTACTTGATTACCA 57 NA Drosophila melanogaster 61 CG11123 FBgn0033169 FBtr0088971 1 1 1 60 2R 3328429 3328449 TTCTGGATGCTATGAAAGTGG 58 3328471 3328547 TTGTTGGCCATGATGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG1701 FBgn0033167 FBtr0113049 3 1 1 61 2R 3296506 3296524 TGTCATCGTGGAAGACGAG 59 3296463 3296483 CCCGTTCCTTATACTGACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 3 8 8 139 2R 3287484 3287505 TGCCTCATACAGTTTATAAGGG 57 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 CG33140 FBgn0053140 FBtr0089046 2 1 1 60 2R 3068043 3068061 CGCAAATTGTATCGGTCCA 58 3068079 3068103 GATGTGAGTAGGTTTGGATATAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9436 FBgn0033101 FBtr0086134 2 1 1 60 2R 2645943 2645963 TGGAATACGTAGACCTCTACC 58 2645903 2645923 CTGTCATTGTGGAACTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3267 FBgn0042083 FBtr0086126 3 1 1 105 2R 2635619 2635695 AATATTACTGGCTTCATGGTGG 58 2635761 2635779 TGAACTTGGGCACATTAGC 58 NA Drosophila melanogaster 61 Or42a FBgn0033041 FBtr0086052 1 1 1 88 2R 1679083 1679165 GGGAACTAACATCAGTGTCAC 58 1679015 1679035 CAGATTTGGCAAGTTTCTCAG 57 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 3 4 4 80 2R 1435359 1435379 CGGACACAATGAATCTTTACG 57 1435418 1435502 GCATAACATACATGTGCATCAG 58 NA Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113,FBtr0111114 2 2 2 63 2R 494766 494786 CCAATTACGACAAACATCCCT 58 494809 495867 TCTCCTTTAGATGACGATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11630 FBgn0032964 FBtr0085909 2 1 1 60 2L 21782663 21782681 AGTAACAATCGTCGTCTGG 57 21782621 21782641 TAGGTAAGTTCTGGAGAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 1 2 2 123 2L 20760824 20763498 TTATGTGGCACTTGAAAGGT 57 20763584 20763602 CATTGGTACACCTTGTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11019 FBgn0040998 FBtr0081359 2 1 1 79 2L 20427169 20427188 AAGACCGATTCCATAACCGA 58 20427227 20427248 GGAATATAGCTATTGCCAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10194 FBgn0032790 FBtr0081285 1 1 1 88 2L 19489632 19489712 CTGGATCCATCCCTAGCTC 58 19489562 19489580 AATGATTTGCTGTCCCTGC 58 NA Drosophila melanogaster 61 CG17349 FBgn0032771 FBtr0081198 3 1 1 98 2L 19370712 19370730 GTACCTCAGGTCGAAGGTG 60 19370856 19370934 ATGTCGATCTTTGGAGGAGG 59 NA Drosophila melanogaster 61 l(2)37Cd FBgn0086445 FBtr0081156 1 1 1 107 2L 19127558 19127576 TATCCATAACCGTGAGGCG 59 19127646 19127722 CACAAAGCGTTTCAAAGGTG 58 NA Drosophila melanogaster 61 CG10428 FBgn0032724 FBtr0081132 2 1 1 81 2L 18949825 18949846 GAGAATTGTCTTCCAACATTGC 59 18949888 18949958 GAAAGAGTCGATCTCGCTG 58 NA Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0290267 3 1 3 134 2L 17963536 17963554 TACGGAAGCTATGGAAACG 57 17972309 17972327 CGTTTCCTTTCTCGATCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15144 FBgn0032648 FBtr0080992 2 1 1 82 2L 17528310 17528328 AAGTGCGACTTCTTTCCGA 59 17528188 17528267 GCAGAAGATTCCCTATAGAGGG 59 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 1 1 1 78 2L 16730216 16730292 CTTATCTACAAGCAAAGTCCTCG 59 16730330 16730348 AGTGATCCGTATCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Cyt-c-p FBgn0000409 FBtr0080889 2 1 1 80 2L 16719967 16722017 TGTGTTCAATTCGAGTCCG 58 16722061 16722079 CTTCTCAACATCACCAGCA 57 NA InUTR Drosophila melanogaster 61 CG4631 FBgn0032590 FBtr0080871 2 1 1 60 2L 16608979 16608998 ACACCAAACCAGTATTCCCT 59 16609018 16609039 GCACTATCTTTCCTTGATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5861 FBgn0015338 FBtr0080850 1 1 1 101 2L 16306613 16306701 TCTTTGCGGAGATTCTTCG 58 16306530 16306548 TTATGAGCTTTGAGTGGCC 57 NA Drosophila melanogaster 61 CG12448 FBgn0028857 FBtr0300613 3 1 1 82 2L 15941990 15942008 CGCTTTACAGAAAGGTCCA 57 15942052 15942134 ACTTAGCAGATCAGATTCCCT 58 NA Drosophila melanogaster 61 Tektin-A FBgn0028902 FBtr0080788 1 1 1 68 2L 15855048 15855066 ACTGTACAGGTCGTCAACG 59 15855163 15855181 GAATTCGGTGGTCGAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089700 3 1 2 81 2L 15486432 15486451 GGAGTTCCGACATATGTGAG 57 15486493 15490708 CAACTATTAGCTTCGACTTCG 57 NA Drosophila melanogaster 61 CG15269 FBgn0028878 FBtr0080704 3 1 1 187 2L 15110512 15112096 TCTGAAACTCTGCAGGCTC 59 15112244 15112265 CTGCTCAAATATCCCTTATCGT 58 NA DesignRelaxed Drosophila melanogaster 61 l(2)35Bd FBgn0001974 FBtr0080696 3 1 1 82 2L 15011209 15011287 GAAGCAGCAACTCTTTATTTGG 58 15011329 15011348 AATTCGAACAATGGTTTGCC 58 NA Drosophila melanogaster 61 l(2)35Bd FBgn0001974 FBtr0080696 2 1 1 81 2L 15011209 15011287 GAAGCAGCAACTCTTTATTTGG 58 15011328 15011347 ATTCGAACAATGGTTTGCCA 59 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 1 5 5 80 2L 14984074 14984206 AGTCATATTAATCACTCGCCTG 58 14984015 14984034 CGTGAGAAGGCTTTGTATGG 59 NA Drosophila melanogaster 61 Cyp28a5 FBgn0028940 FBtr0080587 1 1 1 80 2L 13977927 13978010 ACGATGGGACGGATAAAGAC 60 13978053 13978071 CAATTGCTTCTCCACCCAC 59 NA Drosophila melanogaster 61 He FBgn0028430 FBtr0080616 1 1 1 100 2L 13972600 13972798 CAATACATAGCAACCGTCCA 58 13972519 13972537 GGATTCCGTTTCACTTGGG 58 NA Drosophila melanogaster 61 CG7953 FBgn0028533 FBtr0080550 3 1 1 268 2L 13848092 13848255 AGGAGGGAGTTGAAGTTGC 59 13848485 13848505 ATCGAAGGTAATCTTGCTGGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG16850 FBgn0032527 FBtr0080505 2 1 1 75 2L 13475726 13475744 TTCCATCCGGTCATCTCTG 58 13475783 13475801 CTTCCATATGCGAGACCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5867 FBgn0027586 FBtr0080449 1 1 1 86 2L 13238891 13238909 ACCAAACTGGAGACTGAGC 60 13238959 13239039 GATGACATCGTTCAGCACC 59 NA Drosophila melanogaster 61 Ski6 FBgn0032487 FBtr0080483 1 1 1 60 2L 13221586 13221604 CTTGGAAACCGTCATCGAG 58 13221544 13221565 CTCCAGAATGTCCCTTATTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek4 FBgn0032484 FBtr0080485 1 1 1 82 2L 13213064 13213082 CATTTCATCGCGGAATCGG 59 13212935 13213021 CGAGCTCATCTTTCTGTTTGAG 59 NA Drosophila melanogaster 61 Edem2 FBgn0032480 FBtr0080438 3 1 1 85 2L 13194886 13194905 GATGAGTTCGTCTTCACGAC 58 13194953 13195145 GTCTGGCGAAAGCTAAACG 59 NA Drosophila melanogaster 61 Sir2 FBgn0024291 FBtr0080434 2 1 1 68 2L 13167158 13167176 GAGAACGGCATCATGAAGC 59 13167387 13167405 GACCGTGTGGTACTCATCC 60 NA DesignNoJunction Drosophila melanogaster 61 CG16800 FBgn0032462 FBtr0273445 2 1 1 179 2L 12966897 12967107 AGGAGCAGGAAGAAGATCAG 58 12967249 12967267 TGTCGTGGTGACCTTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 2 2 2 80 2L 12914445 12914465 CCAAGTCAATCATCAATGACC 57 12914505 12914635 GGGTGAGTTTAAGTTAATGCC 57 NA Drosophila melanogaster 61 CG5787 FBgn0032454 FBtr0080405 1 1 1 87 2L 12710422 12710440 AAAGGTGGACCACAAGGAG 59 12710217 12710373 GCTTCTGACTAATTTGGACGG 59 NA Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290239,FBtr0290240 2 2 2 60 2L 12209585 12209605 GAATCTACAAGCTGATGACGG 59 12209627 12209645 TTACTTTGCCAGTCCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0110911 3 1 2 129 2L 12096637 12096707 GCCTTTAATTATGCCCAATTGG 58 12096794 12096815 CACTCAGGCTTTGAATATTCCT 58 NA Drosophila melanogaster 61 CG14946 FBgn0032405 FBtr0302029 3 1 1 86 2L 12063984 12064002 CCACCAAATTCGCTGTACG 59 12063858 12063935 TGGTGGTTCGAATCAGATCC 59 NA Drosophila melanogaster 61 Or33a FBgn0026392 FBtr0080278 1 1 1 60 2L 11935226 11935320 AGATAATACGCCTACTTCGC 57 11935343 11935361 CTAGAAAGGAACTGGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42471 FBgn0259961 FBtr0300307 2 1 1 81 2L 11753874 11753948 AGTTTATTCCACTGTTTGCAGG 59 11753814 11753832 AGTACGCTCGTTGTAGCTC 59 NA Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 2 1 1 148 2L 11016283 11016301 GAGCAGTCAGGAGAACCAG 59 11016412 11016497 GAACCTGTGGTCAGATCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sur FBgn0028675 FBtr0290268 1 1 1 80 2L 10194420 10194439 TGCATTGTGATAATGACGCC 59 10194305 10194381 GGTATATCCCGCTATAACCTCTG 59 NA Drosophila melanogaster 61 Cpr31A FBgn0053302 FBtr0079936 2 1 1 74 2L 10054305 10054323 CTTCATCCTCGAGCAAACC 58 10054361 10054873 AACAGTCAGGAGTTTGCCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 1 3 3 80 2L 9911765 9912137 CTTTGACACAATGGCCATCC 59 9911704 9911723 TTCTCCCTTAGGTATCGCAC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079916,FBtr0079912,FBtr0079914,FBtr0079915 1 5 6 85 2L 9809280 9809298 TAGACATCACGTGGTTCCC 59 9807949 9809234 CAAATCCAACTGATTTCCATCG 58 NA Drosophila melanogaster 61 CG13113 FBgn0032126 FBtr0079832 2 1 1 60 2L 9544312 9544330 GATGGCTCCACTTAAGCAG 58 9544352 9544372 ATGCTCCACTTTGTTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scat FBgn0011232 FBtr0079809 3 1 1 118 2L 9431887 9432284 CAGCGACTTCGTCAATCAC 59 9432366 9432384 GATCTGAGACTCCGTCCAG 59 NA Drosophila melanogaster 61 CG9287 FBgn0032057 FBtr0079753 3 1 1 133 2L 8677709 8677727 TGATCCGACAAACGGTAGG 59 8677448 8677612 GCCAGCAACATCGATTAGC 59 NA Drosophila melanogaster 61 fu2 FBgn0029173 FBtr0079674 3 1 1 143 2L 8464643 8464661 CAGGATGTGAGCACTTGTC 58 8464768 8464844 GTTGCGATCGTACTGAACG 59 NA Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 2 2 2 91 2L 8372746 8372891 TATTATGGACCCACGGTGG 58 8372945 8372964 TTCTTGCCCAAATCCAAGTG 59 NA Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 3 2 2 122 2L 7823093 7823467 GAGGATAGGTTTATTATCGAGGAG 58 7823548 7823566 GTTCTTCACCAGCACATCC 58 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 2 2 2 95 2L 7388043 7388061 AATTCGGAAGAGCTACGCA 59 7386640 7387986 CCAAGTTTCCACCAATCTGTC 59 NA Drosophila melanogaster 61 CG11319 FBgn0031835 FBtr0089641 3 1 1 80 2L 6576362 6576861 AATCAGGTCCTTACGCTACC 59 6576301 6576319 AGCGGATCCTTTAGGTCAG 58 NA Drosophila melanogaster 61 CG9547 FBgn0031824 FBtr0079263 2 1 1 142 2L 6494021 6494039 TACGACTTTGGATCCGAGG 58 6493779 6493797 TTGCTATCGTACTTGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262,FBtr0113411 3 2 2 125 2L 6491593 6491688 GAGAAGTGGAGTAAGGTCCG 59 6491775 6491794 CTCGAGATCGTTCTTCTCCC 59 NA Drosophila melanogaster 61 CG9140 FBgn0031771 FBtr0079216 2 1 1 87 2L 6061241 6061259 ATAAGCATGAGAGCTGTGG 57 6061109 6061192 TCACCCTTAACAAATCGAGTC 58 NA Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 3 2 2 80 2L 5735109 5735127 CAGGAACCAATCTTTGGCA 58 5734811 5735068 GAAGAAGACCATGGTCATTACC 58 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118,FBtr0079120,FBtr0079119 3 3 3 93 2L 5580997 5581015 TAAATCGTCCCTGACGACG 59 5580862 5580880 CTGACTGTTGACTTTGCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 3 2 2 169 2L 5048718 5048807 CTTTGCCAGGTTGCTATGC 59 5048567 5048585 GGAGACTCCGACGAATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 vkg FBgn0016075 FBtr0079036 1 1 1 81 2L 5013429 5013509 CAGTTACTTCATGAGCACCT 57 5013367 5013385 GAACTCCTCCAAGCAAGAG 57 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 3 2 2 97 2L 3716095 3716165 TCCCAGTCAGGTGAATCTG 58 3716223 3716244 GTTCCTTTAACAGCTTGATGGT 59 NA Drosophila melanogaster 61 Dot FBgn0015663 FBtr0077532 2 1 1 81 2L 3620376 3620513 AATTGGCGCTTCTATGTCAC 59 3620557 3620575 CAATGCACCGATTCAGTGG 59 NA Drosophila melanogaster 61 CG2772 FBgn0031533 FBtr0077516 1 1 1 80 2L 3447080 3447152 CCTTAACCAGACTCTGCTC 57 3447195 3447214 TGAATGTAGTGAATGGCCTG 58 NA Drosophila melanogaster 61 CG12400 FBgn0031505 FBtr0077617 2 1 1 111 2L 3145377 3145400 CTTATTTCGATCAGAAGAGGAACG 59 3145234 3145307 CCATAGGTCTTGCGTTCCT 59 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077775 3 1 5 120 2L 2454801 2454820 TACAGATACGTTGAGTCGCC 59 2454903 2455069 GTCGCTTGCAACTACTCAG 59 NA InUTR Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 1 2 2 84 2L 2368139 2368157 CTCTTTGCTAGTGGCTCCA 59 2368204 2368325 AGGAAGTGATCTGAGTGCTG 59 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 1 1 1 60 2L 2287605 2287687 TTCAAAGTCACATCGAATGCC 59 2287565 2287583 CTATCCTGCCGGTATTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34049 FBgn0054049 FBtr0302372 2 1 1 83 2L 2264703 2264783 GAGTGGGCAGATCATTTGG 58 2264638 2264658 CCGGACACGCATAATATTCTC 59 NA Drosophila melanogaster 61 Uch FBgn0010288 FBtr0077844 1 1 1 88 2L 2213547 2213623 GCGAAACCTATGAGAAGCA 58 2213477 2213495 GCGCATGTAGAAGAGATCC 58 NA Drosophila melanogaster 61 Nplp4 FBgn0040717 FBtr0077817 3 1 1 164 2L 2008532 2008681 GTTCAAGCTGCTGGTTGTC 59 2008808 2008827 TAGTATCCTCCGGAGTAGGC 59 NA Nonspecific Drosophila melanogaster 61 Npc2a FBgn0031381 FBtr0077816 1 1 1 153 2L 1988528 1988546 TCCTCAAGAGGAACACCAC 59 1988663 1988681 TTCAGACCACTGTCCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868 2 1 3 137 2L 1986091 1986805 GAACAGAGTATCAACATGGTTCTC 59 1985977 1985995 GTGTTGTCATCGCGATAGG 58 NA Drosophila melanogaster 61 Gr22e FBgn0045497 FBtr0077888 3 1 1 88 2L 1785004 1785022 ACTGGGAGACAAACTTCCA 59 1785072 1785147 GCAAAGTCCGTGATACTTCTC 59 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461,FBtr0070034 1 5 5 80 X 19905403 19905496 CATAGACAGATACATCGCTGTG 58 19905344 19905362 AGTATCGTAAGGCAAACGC 58 NA Drosophila melanogaster 61 CG10778 FBgn0029980 FBtr0071131 2 1 1 187 X 7826321 7826581 ATGATGTGGCAGTTAAGCA 57 7826152 7826170 CGTTCGCTGTAGAAGTCAG 58 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085744 1 1 3 149 3R 26886213 26886231 TTGTGGCAGAATCAATCCA 57 26884335 26886100 TGTATTCGAAGGGTTCGTG 57 NA InUTR Drosophila melanogaster 61 RpS8 FBgn0039713 FBtr0085489 2 1 1 90 3R 25688838 25688856 TGAAGAAGTACCTGGAGCG 59 25688910 25689146 GAAATGCAAGCCAAGATGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 2 2 2 81 3R 20358455 20358475 GGATTGTGCTGAATTAACGGA 59 20358515 20358592 TATAATGTTAGCATCGGTTGGC 59 NA Drosophila melanogaster 61 CG17273 FBgn0027493 FBtr0083991 2 1 1 167 3R 16651279 16651363 CAGCTAAATGATATTGGCGAC 57 16651132 16651150 CGTGTCGAGAATATCCAGC 58 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0112576,FBtr0112577 3 2 5 60 3R 5808080 5812378 AAACACATTTGGGAAAGGACTC 59 5812399 5812417 AAGTCCTCCTCATTTCCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091946 2 1 2 173 3R 5181418 5182158 TAAATAAGCACAAGCGACAGC 59 5182293 5182311 CTTATGTTGCTGCTTCCGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 3 1 1 212 3R 4834627 4834703 GATAGCTGCGGTACGTAGG 59 4834878 4834897 TTTCTACGCAGCTCATAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 1 4 4 115 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 Sgf11 FBgn0036804 FBtr0113179 2 1 1 60 3L 18674535 18674553 CGGAGGACTCAACCTATCG 59 18674493 18674513 GTTGAGATGCCGAATATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6259 FBgn0036740 FBtr0075201 3 1 1 97 3L 17613587 17613606 CGATGACACCAGCTATTTGG 59 17613448 17613527 CAATGGTGCTCTTTCCAGG 58 NA Drosophila melanogaster 61 roq FBgn0036621 FBtr0075423 3 1 1 129 3L 16370274 16370293 CATCTGCTGCAATGAATTCG 58 16370099 16370182 GACAATCACGGTCTGATCG 58 NA Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075486 3 1 2 74 3L 16207000 16207018 ATCGAATGCAACTGGAAGC 58 16206700 16206718 ACTATATGAACACGGCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr67Fb FBgn0036110 FBtr0076193 3 1 1 131 3L 10887299 10887381 GACCGCGCTAATCATTTCC 59 10887476 10887494 TTGGACGTTCCGTATTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18418 FBgn0035568 FBtr0073366 2 1 1 60 3L 4689404 4689422 CAGCTTGCCTCCTATTCAC 58 4689362 4689384 GTATTCCTTCACTGAGATACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 1 2 2 96 2R 20579775 20579855 GAATTCGCAAGTGGTCACC 59 20579697 20579715 ATTGTACTTGCCCGGATCC 59 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153,FBtr0072155,FBtr0072154 2 3 3 60 2R 19859018 19859039 GATAAAGATTAAGCTGGAACGG 57 19859059 19859078 TTCAGGAGATACGATCTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4882 FBgn0025336 FBtr0072225 1 1 1 150 2R 19769760 19769778 GGAATTCAACAAGGTGGCG 59 19769574 19769648 CTTCTGTTTCCTGAGCTTGAG 59 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801,FBtr0071802 3 2 2 181 2R 17960563 17960727 CTCTATAAGCAGAGCTTTGCC 58 17960332 17960350 TTGCTCAGGATGTCATCCC 59 NA Drosophila melanogaster 61 CG14479 FBgn0034228 FBtr0086952 2 1 1 60 2R 13390182 13390203 CAACTGATCAGGCCAATATCAC 59 13390143 13390161 TCCATTCCCGACTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8520 FBgn0033734 FBtr0087926 2 1 1 84 2R 8311540 8311558 GTCTGTACCTGTACGGCAG 59 8311603 8311681 TTTCGATGAATTTGGGTACAGC 59 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088813 2 1 4 60 2R 4036832 4036853 TCAGATCTATCAGATCAGTGTG 57 4035881 4036817 CTCTTGATCCTGTTACTGATATGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10338 FBgn0032700 FBtr0081096 1 1 1 80 2L 18697685 18697706 CAGCTTAAGGAGAAATACTGGG 58 18697747 18697834 GATTAGCCAACCCTCTTGC 58 NA Drosophila melanogaster 61 Ssb-c31a FBgn0015299 FBtr0079590 3 1 1 102 2L 8211495 8211570 CAGATGATCGTATCAAGCCG 59 8211635 8211653 AGGGTCCAAGATGTAGCAC 59 NA Drosophila melanogaster 61 ninaA FBgn0002936 FBtr0078023 2 1 1 128 2L 877850 877869 CACCATCTATGCCATTGAGG 58 878058 878076 AGGATGTTGAAGTCGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13946 FBgn0040725 FBtr0078004 1 1 1 73 2L 776752 776770 AATGGAACCGAACTCTCCA 58 776807 776825 TCAGTGGTGCTGGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11374 FBgn0031214 FBtr0114507 1 1 1 60 2L 76959 76977 TCCGAGTATCCTATACGCC 57 76998 77019 GTTTGTTTGAATGTGGAATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18336 FBgn0040763 FBtr0088175 1 1 1 178 2R 7181686 7181765 CTATTCCAGCCGATTTGGT 57 7181526 7181544 GTGGAATCATGCCTACCAC 58 NA Drosophila melanogaster 61 CG10343 FBgn0032703 FBtr0081098 1 1 1 80 2L 18703593 18703613 CGTTGCAGTCAATATACGAGG 59 18703652 18703740 CCTCTTCGCCATATTTGTACTG 59 NA Drosophila melanogaster 61 Sirt7 FBgn0039631 FBtr0085364 3 1 1 94 3R 24881950 24881968 CAGTCTTACATAACGCGGG 58 24882025 24882264 AGTATCATCGAGACCCTTCG 58 NA Drosophila melanogaster 61 CG9393 FBgn0037710 FBtr0082113 1 1 1 112 3R 5388619 5388637 TACTACCCGTCGTCCTACC 59 5388279 5388544 GCATTGACAACGAGGTAGTC 59 NA Drosophila melanogaster 61 Cpr72Ec FBgn0036619 FBtr0075424 3 1 1 60 3L 16359247 16359265 GACAACAGTGATCTCCGTG 58 16359205 16359223 TGGTGTTGGGAGAAACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 2 2 2 97 X 19171597 19171694 CTACTTGCCCAAGGAAAGG 58 19171518 19171538 GAATAAACCCAACAATGGGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076397 3 1 2 275 3L 9701358 9701376 TACGCTCCAGTAAAGCCTG 59 9701756 9701774 GATGCTGCTCCTCATAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Atg2 FBgn0044452 FBtr0072970 2 1 1 250 3L 2774386 2774404 GATGGTCACTTGCTACTGC 58 2774699 2774717 CATCCCAGGGATTGAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0302575,FBtr0072399,FBtr0100467,FBtr0100466 3 8 8 80 2R 20879486 20879565 AATGGATAAGCTGAATAGCCG 58 20879426 20879446 GTCTTCTCCTTCTGCAATTCC 59 NA Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 2 1 2 80 3R 21419246 21419321 CGAAGTACCTCAAGTTCATGAG 58 21419187 21419205 CTGTGTCACCTTGATTGGC 59 NA Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 1 1 1 77 3R 14804290 14804383 ATCTCATCAAGAGCATGGC 57 14804231 14804249 CATCGGAAATGGTGACCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 3 2 2 160 3R 9193735 9193755 AAGAAGTACGTCAATACGGAC 57 9193876 9193985 GCATTATTGTAGTTGCGTCG 58 NA Drosophila melanogaster 61 ATbp FBgn0039946 FBtr0301978 2 1 1 69 XHet 85042 85060 CAGGATCAGTTCTGGAAGC 57 85093 85171 GACTGTGTTCCTTTGCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0301337,FBtr0070095 3 2 2 197 X 375436 375454 CAGATGCTATCAGGAGTGC 57 375194 375278 ATAGTTCAACGAGTGACAAGAG 58 NA Drosophila melanogaster 61 rictor FBgn0031006 FBtr0074689 3 1 1 81 X 19153395 19153476 CTCTACTGCCTTAGTGCCT 58 19153332 19153350 TAATGGCATACCGGATCGT 58 NA Drosophila melanogaster 61 Pk17E FBgn0004462 FBtr0074634 2 1 1 80 X 18685100 18685185 ACAACCTCCATATTCTATCGGA 58 18685223 18685244 GAACCAGATCAATGGAGAAGTG 59 NA Drosophila melanogaster 61 TwdlY FBgn0052570 FBtr0074326 1 1 1 60 X 16629394 16629412 GTGAAGCATCTGGTCTTGG 58 16629436 16629454 GAGCCTTGATGAACACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074292 1 1 2 162 X 16462304 16480970 AAACGAAGTTAAGAGCGCG 59 16462160 16462179 CCCGTAAGAGTTGATCACGT 59 NA InUTR Drosophila melanogaster 61 Or13a FBgn0030715 FBtr0074133 2 1 1 80 X 15870527 15870545 CAGTCAACAGCCTGTAAGG 58 15870589 15870678 GAGGTACTTAGAATGGCCG 57 NA Drosophila melanogaster 61 CG9514 FBgn0030592 FBtr0073980 1 1 1 83 X 14782503 14789805 ATTGGAAGTATCGCACCCA 59 14782438 14782456 AAACTTTGCCTCTCGTCCA 59 NA Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 2 2 2 80 X 13582343 13582362 GATACTGCAGTCCATTCTGG 58 13582186 13582300 CTGTAGCCACAAACTTCCA 57 NA Drosophila melanogaster 61 CG1737 FBgn0030293 FBtr0073453 2 1 1 170 X 11245155 11245173 TTAAGAGTGACCATCCGCA 58 11245306 11245738 ATCTTTCATGGGTAGCTTCG 57 NA InUTR Drosophila melanogaster 61 CG1738 FBgn0030291 FBtr0073451 1 1 1 101 X 11243403 11243421 TTCGATATCAAGAAGGCGC 58 11243483 11243504 CTTGATCAGCTGAAACATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34144 FBgn0083980 FBtr0110988 2 1 1 243 X 11192252 11196640 GATGTTGTGGACATCTCTGC 59 11192028 11192046 TGGCAACGAAATTCGAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 sbr FBgn0003321 FBtr0073411 3 1 1 80 X 10728725 10728927 AACTGGTTAAGTTGGACGGA 59 10728664 10728682 TCGTTTCGAGAAGACGTCC 59 NA Drosophila melanogaster 61 Or9a FBgn0030204 FBtr0071462 2 1 1 83 X 10353298 10353380 GGCTAAAGAAATCGAAGTGTG 57 10353235 10353255 TACGTAAGACTGAGCATTTGG 58 NA Drosophila melanogaster 61 Gip FBgn0011770 FBtr0071472 3 1 1 60 X 10223471 10223491 GTGGCAAGATTCATCTAACCG 59 10223431 10223450 TTCGTGTAGTCACTCTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 3 1 1 147 X 9506236 9506329 AAAGGTCATTGCCTTCCTG 58 9506440 9506458 GTCATGGCCCAATCTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42569 FBgn0260771 FBtr0301275 1 1 1 80 X 9138110 9138129 GAATTCTACTTCGGTGACGC 59 9138169 9138250 CAATGGTACATATGGATCCTGC 59 NA Drosophila melanogaster 61 CG2233 FBgn0029990 FBtr0071123 3 1 1 88 X 7930188 7930266 ACAACTCGCCCTTCTATCG 59 7930118 7930136 GGAGAAGAGGGTGTTCCTC 59 NA Drosophila melanogaster 61 cm FBgn0000330 FBtr0071033 3 1 1 87 X 6904468 6904562 GGCAAGAGCAATGTAAGCA 58 6904399 6904417 CGTTGTTGGTGTACCTCAC 58 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091672 2 1 3 86 X 6766877 6766895 GAACAACCATAGTGGTGGC 58 6766945 6771955 GCTAGTGACATGTGGTTGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15770 FBgn0029803 FBtr0070811 1 1 1 60 X 5659602 5659621 GATAATACCGATGACGACGA 57 5659643 5659662 AATATAAACCTGCAAGGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6379 FBgn0029693 FBtr0070671 2 1 1 93 X 3994031 3994052 TTCTCTATTTCACGGACATGTG 58 3993858 3993876 GTGAAGCCGAATCCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14805 FBgn0023514 FBtr0070312 3 1 1 80 X 1772159 1772178 ACTAGGGTGTATGTTGGCTC 59 1772220 1772296 GTGATATTCCTTCATGCGCG 59 NA Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070236 2 1 2 90 X 1240147 1242266 CATGAGTAACCTCACTGGC 57 1240075 1240093 AATGGTAAAGGTCAACGGC 58 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 1 3 3 114 X 938609 938688 CAATCTGGATAAGGCTCCTG 57 938765 938783 AGCAGCATTCGAACTAGTC 57 NA Drosophila melanogaster 61 CR40639 FBgn0085758 FBtr0114208 1 1 1 60 U 9455995 9456015 CTGAAGATTGAGATAGTCGGG 57 9456037 9456055 AGAACGAGCACATAAACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40741 FBgn0085771 FBtr0114221 1 1 1 60 U 8864059 8864077 GCAAGGTGTTGTAAGTGGT 58 8864099 8864119 CAAAGGATAAGCTTCAGTGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41607 FBgn0085817 FBtr0114275 2 1 1 73 U 4306341 4306362 CTTGGAATTTCCATTAACTCGC 58 4306396 4306414 TCAATCGGTAGTAGCGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41607 FBgn0085817 FBtr0114275 1 1 1 72 U 4306300 4306319 CTTTCATGCTCGGAATTGTG 57 4306351 4306372 CGTAATGAATGCGAGTTAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42416 FBgn0259847 FBtr0300144 3 1 1 82 U 6868947 6868966 CTTAAATCGCCCAAGTCCTC 58 6869011 6869029 TTGACTTCGTAATGCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40249 FBgn0058249 FBtr0302216 1 1 1 60 U 963566 963584 GGATATGGATGTGGTTGCT 57 963524 963542 ATGGTGCGATCAATCATGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 3 2 2 81 4 1164123 1164144 CAACATATAGGGATCCCTTCAC 58 1161982 1164083 CTCATTCGTAATGATCCCAGC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377e FBgn0083047 FBtr0113594 1 1 1 60 3R 26032799 26032819 TTTCTGGACGTTGTTCAAGTC 59 26032759 26032779 GATTCGTTGCATTACTTTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385b FBgn0082961 FBtr0113576 2 1 1 63 3R 1422008 1422026 TCATTCGATTGAGCCAAGC 58 1421963 1421981 GTTATCTGGACACCCAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816,FBtr0085815 3 2 2 199 3R 27437459 27437711 GCAGGACATAATTGTCCGG 58 27437874 27437892 TCAAGGAGTCCAGTTCGTC 59 NA Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 3 2 2 115 3R 26877544 26877562 ACCTTTAATGGTTACGCGC 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 2 4 5 82 3R 25653847 25653868 CTCATATGCTCTGTAAGAGACG 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 2 2 2 80 3R 25650686 25650849 TAACGCCATTGGTCTTATCAC 58 25650891 25650909 TAGCAGTACGTCCAGATCG 58 NA Drosophila melanogaster 61 CG31041 FBgn0051041 FBtr0085470 3 1 1 159 3R 25416339 25416357 TGATCGACTCAAGCTACCG 59 25416061 25416079 GCTTTCTCCAGTTCCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 2 2 2 145 3R 25004530 25006888 AGAGTTCGATTATGCCAGTC 57 25004404 25004422 CATAGTGATTGGTGACGGG 58 NA Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 2 1 1 86 3R 23305529 23305609 TGAAACTCTACGCCATTATACC 58 23305656 23305674 ACAAATTTGGGATTGCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 3 2 2 94 3R 23212947 23214186 GAATGATCAGGCGACATCTG 58 23212872 23212891 ATTGATATTCACGTCCCGGT 59 NA Drosophila melanogaster 61 CG6059 FBgn0039491 FBtr0085130 2 1 1 82 3R 22949694 22949779 ATCTCTAACAAGGACCTCCA 57 22949631 22949649 TTCTGGTGGTCCTTAAGCT 58 NA Drosophila melanogaster 61 CG6420 FBgn0039451 FBtr0085046 1 1 1 88 3R 22548702 22548720 CACCACAGGTCAAATCCAG 58 22548560 22548650 TCTTGTCGATCAGTCGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084687 3 1 2 212 3R 20540704 20540788 CTCCATTTCTGCTGTTCGC 59 20540964 20540982 GACCCTTCAGTACCAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13618 FBgn0039203 FBtr0084643 2 1 1 115 3R 20352520 20352538 AAACTCGTTATAGACGCCG 57 20352617 20352751 TCCAGATCGGTTCTGTACC 58 NA Drosophila melanogaster 61 CG13841 FBgn0040588 FBtr0084316 1 1 1 80 3R 18593298 18593382 CAGAGTTACTACGTGCCTG 57 18593236 18593254 TAAAGCACTTTGGTGTCGG 58 NA Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 3 2 2 69 3R 18313056 18313074 TCGACCTGACCAAGTTGAG 59 18313107 18313242 TTGGTAATCTCCTGCTCGA 58 NA DesignRelaxed Drosophila melanogaster 61 BG4 FBgn0038928 FBtr0084176 1 1 1 60 3R 17860412 17860430 GCATACGAACCATCGAGGA 59 17860454 17860472 TACTCCGATAGTTCGTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31431 FBgn0051431 FBtr0084137 1 1 1 80 3R 17697850 17698142 GTTGACTATACAGAGAACACAGAG 58 17698179 17698199 CAGACCTTTGAGATTGCACTG 59 NA Drosophila melanogaster 61 CheB93b FBgn0051438 FBtr0084090 2 1 1 123 3R 17235002 17235020 GAGTTGGCTGATCTTTCCC 58 17235107 17235187 TGTTTACTTCAACCGCGAC 58 NA Drosophila melanogaster 61 r-l FBgn0003257 FBtr0084038 1 1 1 106 3R 16898867 16898885 TCAATGCCTTCAAGTTCGG 58 16898719 16898797 TACGGTTTGCATCACATCC 58 NA Drosophila melanogaster 61 CG17273 FBgn0027493 FBtr0083991 3 1 1 168 3R 16651281 16651364 GCAGCTAAATGATATTGGCG 57 16651132 16651150 CGTGTCGAGAATATCCAGC 58 NA Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 3 2 2 131 3R 14677252 14677270 TTTAACTCCTGGTGCGGAG 59 14677086 14677158 CCTTGCAAGAGATGTTCAGC 59 NA InUTR Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 3 2 2 91 3R 14416141 14416255 CTGAAGAAGACGAATTCCTGTC 59 14416307 14416325 TCATCCTGCCTAAACCTGC 59 NA Drosophila melanogaster 61 CG7168 FBgn0038586 FBtr0083608 3 1 1 108 3R 14051544 14051633 AAGGGATACGCTGAAGTACAG 59 14051378 14051397 GAGTTAAGCGCAGAGATGAC 58 NA InUTR Drosophila melanogaster 61 mRpS11 FBgn0038474 FBtr0089894 1 1 1 108 3R 12898897 12898969 ATCACAAAGGAGTCCTCCG 59 12899041 12899059 CCACTAATGGTAACCGCTG 58 NA Drosophila melanogaster 61 CG8066 FBgn0038243 FBtr0082981 3 1 1 124 3R 10394483 10394501 AACGTTCCAATTGTAGGCG 58 10394313 10394395 TTAAGTGCCTTGTAGCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG8031 FBgn0038110 FBtr0082719 1 1 1 80 3R 8834979 8834997 GGACATGAAGACTGACGAG 57 8834860 8834936 TCCTTGTAGTCCTCCATCAC 58 NA Drosophila melanogaster 61 Cyp313a5 FBgn0038005 FBtr0082619 2 1 1 84 3R 8058726 8058801 AACATGCTTAGGTTGGAAACTC 59 8058663 8058686 GGTGGTACTCAGCATATAATTTCG 59 NA Drosophila melanogaster 61 CG14722 FBgn0037943 FBtr0082431 1 1 1 61 3R 7567862 7567883 GGACTTGCAATATTATGCACAC 58 7567980 7567998 TAGTTCGTCTTCGTCGGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 1 3 3 123 3R 7504585 7504674 AACACTCCCATGCTTACCA 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 CG14692 FBgn0037836 FBtr0302798 1 1 1 80 3R 6621448 6621467 TGAAGCTCTGTTCGATTCAG 58 6621322 6621405 ATGTCCAGAGACTGTACGA 57 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082306 1 1 4 80 3R 6602947 6602966 ACGAAAGTGGATTTACGACC 58 6600775 6602906 TTCTCTTCGTTCTCGTAACTG 57 NA Drosophila melanogaster 61 CG34304 FBgn0085333 FBtr0112500 1 1 1 240 3R 6482298 6484119 CCTTTAATATAATTCCCGCGG 57 6484321 6484339 GTTTCACCTGAGACACTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 3 1 1 110 3R 5878502 5878520 TAACGAAGATGTAGAGCGC 57 5878353 5878428 CATGTATCCTCACTGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8165 FBgn0037703 FBtr0082063 3 1 1 132 3R 5341847 5341865 AGAAGTTTGGCTCAAGCCA 59 5344052 5344072 AGAATGAGGTCGAGGATATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 3 4 4 93 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871871 4871889 CATTGCTGTATACAGGCGG 58 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0100617,FBtr0078906,FBtr0078905 2 4 4 80 3R 150463 150481 TGGTTGAAGAACGTCAGTG 58 150522 150604 TTACTTGGGTCTTTAGATCGTC 57 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 2 2 3 226 3L 23093411 23093430 AAATACTTTGGCAAGCCAGC 59 23095383 23095401 TTGTGCGCATTGACATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rpb8 FBgn0037121 FBtr0078432 2 1 1 75 3L 21722167 21722190 CCTCCGCATATAAGATCAAATACG 59 21722294 21722313 CTCAAAGAGTACTCCAGCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11249 FBgn0037115 FBtr0078429 2 1 1 86 3L 21665744 21666032 AAACACCATCTATTGGGCG 58 21666082 21666100 CTTTACGATCAGGCTCTGG 57 NA Drosophila melanogaster 61 ash1 FBgn0005386 FBtr0074970 2 1 1 82 3L 19584577 19584665 CGCCCAATAAACAGATGCT 58 19584513 19584532 TGCATCCAGACACTTAAGCT 59 NA Drosophila melanogaster 61 CG9472 FBgn0036874 FBtr0074982 3 1 1 60 3L 19479247 19479265 AGCTGATGATCACGGAGAG 59 19479205 19479225 GTAATCAGGCGATACTTCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18231 FBgn0036796 FBtr0300052 1 1 1 80 3L 18601498 18601573 TCATATTCGGCATGATCAAGTC 58 18601611 18601632 CCTTATTCAGAGCTTCGTAGGA 59 NA Drosophila melanogaster 61 W FBgn0003997 FBtr0075133 1 1 1 67 3L 18177921 18177939 TATACGCCCTCTACGAGTG 58 18166635 18166653 ATACTGGAAGATTTGCGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6052 FBgn0036747 FBtr0075195 3 1 1 216 3L 17717450 17717474 CAGAGCTCAAAGAGGAATATAATGG 59 17716835 17717276 CACGAGCAGGAGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 1 2 4 91 3L 17591982 17592000 TTATCGACGATGCACTGCT 59 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 CG33052 FBgn0053052 FBtr0075229 1 1 1 98 3L 17420984 17421002 AAGCAGATCGACAATGCCT 59 17420847 17420866 ATTGTGCAGCTCTATCTTGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 2 2 2 82 3L 16652382 16652400 GTGTTCTACTACTGCGGCA 59 16644624 16652336 CGCAATTGGAATCTAGGCC 59 NA Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 2 2 2 117 3L 16104976 16105111 ATAGGACAGCTAATCGCACC 59 16104878 16104896 TAGGTGGCATTGGTTACCG 59 NA InUTR Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 2 3 3 80 3L 14981280 14981298 CAATCCCTCATCGTTTGGG 58 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 26-29-p FBgn0250848 FBtr0075766 1 1 1 93 3L 13988871 13988970 CCGGTGAAAGATCAATCTGTG 59 13989025 13989043 GATTGCCGCCATTCTTCAG 59 NA Drosophila melanogaster 61 CG9040 FBgn0036394 FBtr0075765 2 1 1 60 3L 13981220 13981238 CTAGTACCTCCGAGGACAG 58 13981257 13981280 GTTTCTGAAGAACTACCTGTATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10083 FBgn0036372 FBtr0075819 3 1 1 92 3L 13477335 13477419 AGGAATGCATTAACGGATTTGG 59 13477264 13477282 ATCGTATAGAGCTCGTGCC 59 NA Drosophila melanogaster 61 CG10725 FBgn0036362 FBtr0089323 3 1 1 82 3L 13431224 13431245 CTCCAATGTGGTCAACAATCTC 59 13431284 13431364 GTACAGCTATCTCATTCATGCAC 59 NA Drosophila melanogaster 61 CG11534 FBgn0046296 FBtr0075995 1 1 1 94 3L 12126029 12126047 CCTCCCAGGGATACAAGTG 59 12126155 12126175 GTACAATCCACTATAGTCGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG34050 FBgn0054050 FBtr0100105 2 1 1 213 3L 10937713 10937731 TCATGCATCACTCCAACGT 59 10937908 10937983 CTTGACTTGCAGCTACCTG 58 NA DesignRelaxed Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 3 3 3 80 3L 10214543 10214561 GCATCAATTTCCCACTGGA 58 10214220 10214500 AGAACATGGCATCTATGAGG 57 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428,FBtr0076427 3 2 2 87 3L 9490276 9490294 GAAAGTCGGATACCGAGCA 59 9490140 9490227 TCATTATCGGTTGTTGGATGC 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 2 4 4 80 3L 9463472 9463490 GACGTTTACGCTCTTCTGC 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089495 2 1 3 115 3L 9361012 9361031 AACAAACAGACGGATAACCT 57 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32022 FBgn0052022 FBtr0076597 3 1 1 82 3L 8713995 8714070 AAGGAACTACCTCAAAGTGTC 57 8713933 8713951 CATCGTCCAGTTCTGTCTG 58 NA Drosophila melanogaster 61 CG42591 FBgn0260968 FBtr0301743 1 1 1 60 3L 8062754 8062774 AAATGGAGCACCATCTTTCTG 59 8062714 8062733 AGTGGGCTTGATAGTACGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 3 4 5 229 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8602 FBgn0035763 FBtr0076884 1 1 1 60 3L 7320043 7320063 GGTAATCTCAACATGACACCC 58 7320003 7320021 TCTGATAATTCTCGGCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301107,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106,FBtr0301958,FBtr0301110,FBtr0301108 2 11 11 92 3L 7043788 7044354 TCATCCAGGGTACAGAATCTG 59 7044408 7044426 CGAGTTGAAGAGCACATCG 59 NA Drosophila melanogaster 61 Klp64D FBgn0004380 FBtr0077157 2 1 1 60 3L 5351387 5351405 TCGGTGGTAACTCCAAGAC 59 5351345 5351366 ATATAATTGCTATCCGCTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32237 FBgn0052237 FBtr0073356 1 1 1 75 3L 4852426 4852444 AGATTCCATCGTCAAAGCA 57 4852293 4852311 GGCAATAAAGATGCAGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370,FBtr0073359 1 2 2 80 3L 4821161 4821181 TCTGGGAGTCATATAAGCTCG 58 4821033 4821119 AATCGTCGACCTTCTCCTG 59 NA Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300989 2 1 2 145 3L 4069447 4069537 ATTATCCAGCACGCTTGGA 60 4069705 4069726 ATCCTTATTGCTACGATTTGGG 59 NA InUTR Drosophila melanogaster 61 ImpE2 FBgn0001254 FBtr0073141 3 1 1 60 3L 3512287 3512308 TTAAAGGCAGACATTAAGGAGG 58 3512248 3512266 GCAACTCGTTGATCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 1 2 2 80 3L 1644053 1644072 CGCTTCTGGATACTTACAGC 58 1643936 1644014 CAGTTTAAAGACCACCATACCTC 59 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG12849 FBgn0035068 FBtr0072376 3 1 1 90 2R 20685701 20685768 AACTGCGAGACCAGATTCC 59 20685822 20685840 GCATGAACTTGCAGGAGTC 59 NA Drosophila melanogaster 61 betaTub60D FBgn0003888 FBtr0072270 3 1 1 113 2R 20193648 20198249 AAATCGGCGCTAAGTTCTG 58 20198325 20198344 CGTTGTAGTAGACACTGACG 58 NA Drosophila melanogaster 61 CG5569 FBgn0034919 FBtr0072128 3 1 1 105 2R 19753206 19753224 ATCTGGGCCTTATGGTCAC 59 19753293 19753724 CAGGACAGAACCGATCTGG 59 NA Drosophila melanogaster 61 CG13561 FBgn0034906 FBtr0072243 2 1 1 81 2R 19692098 19692120 CCCTTCATTAACATCATCCTGAG 59 19691978 19692057 CCAACACTATTTCCGGTGG 58 NA Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112,FBtr0072114 2 2 2 205 2R 19435019 19435037 TACTTTCTCATCTCGGCCT 57 19433334 19433352 TGGAAGCTGTGTATCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34372 FBgn0085401 FBtr0273218 3 1 1 80 2R 19354725 19354743 TCCGAATGGTTCTTCCTGG 59 19354782 19361614 GAGATGAAAGGACTTGAGATACTG 58 NA Drosophila melanogaster 61 ord FBgn0003009 FBtr0072047 3 1 1 125 2R 19160343 19160361 ACTGGAGGTCTTCAACCAG 59 19160176 19160254 AAGTCTTCGAGGGTCTTGG 59 NA Drosophila melanogaster 61 CG30279 FBgn0050279 FBtr0071768 1 1 1 67 2R 18066724 18066742 GGAGCATAATGACTCGGCT 59 18066773 18066791 TGATAGTCTGAGGCACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PpD5 FBgn0005778 FBtr0071806 3 1 1 60 2R 17929422 17929441 CCACTTTGTCATCATCCGTC 59 17929381 17929399 ACTATCCGACTCAAAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0086222,FBtr0301760 1 5 5 208 2R 16492939 16492957 TTGGGTAACGGACTGAGTG 59 16493191 16493209 TTACCAATGATGGCACCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16926 FBgn0040732 FBtr0086499 3 1 1 80 2R 15388351 15388441 CCTAAGTGTTGTTAAGATGGCC 59 15388292 15388311 TCACGTTCGTTGAATTGCTC 59 NA Drosophila melanogaster 61 mip40 FBgn0034430 FBtr0086560 1 1 1 60 2R 15178903 15178924 CTTCTGTCCTCCAATATGAACC 58 15178864 15178885 TGATATGCTTTATCCAGTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip55E FBgn0000566 FBtr0086710 1 1 1 60 2R 14516244 14516264 AACAGAAGTCTTAAGACGCTC 58 14516285 14516304 CCTTCAGAGCATTCTTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 1 1 1 117 2R 13934587 13934605 GAAGATCTACCAGGCGGAG 59 13934307 13934506 AGATACATCACTCTCGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603,FBtr0300604,FBtr0086949 2 3 8 82 2R 13408423 13409344 CGCTTCAGGTCCTAAACTC 58 13408359 13408378 AAACACAGTATTCAACGGCA 58 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 3 2 2 82 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993672 12993691 AGAGATCGCATAGCTTGAGG 59 NA Drosophila melanogaster 61 CG30324 FBgn0050324 FBtr0087181 1 1 1 60 2R 12175249 12175270 AAGAAATTCTACGAGTTGCCAG 59 12175210 12175228 CAATCGGAATGTCCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 krimp FBgn0034098 FBtr0087189 3 1 1 153 2R 12126622 12126640 CAGTTCTTGGCTTTCGTCC 59 12126416 12126434 AGAGCTCTAGCTAGCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114473 2 1 3 110 2R 12083980 12083998 TTCGACCAACACTAGTTGC 58 12084072 12086002 CAGTGCCGGAAATCTTCTG 58 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087338 1 1 5 100 2R 11448719 11448737 GACAGCTAATCTGAGCGTC 58 11448883 11448901 TTCGAATCCTTGAGTCGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0112809,FBtr0087465,FBtr0112810 1 4 4 80 2R 10673388 10673408 TGTGATAAGAAGAGCTGTGGT 59 10663821 10673349 GAAGAATTTCAGGAAGAAGCGA 59 NA Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087564,FBtr0087565 1 2 2 60 2R 10157234 10157254 CACAGATTGCGATAACATGCT 59 10157194 10157214 CTCCTTCTCTGTCATCTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13018 FBgn0040751 FBtr0087581 1 1 1 113 2R 10044826 10044844 TCTCAAGATGTGCCTCCTG 59 10044731 10044749 TAGAAGGTATTGCGGAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DJ-1alpha FBgn0033885 FBtr0087615 3 1 1 87 2R 9830748 9830766 AAACGCTCTGATCATCCTG 57 9830626 9830699 AACAAGGATCTTTCCTCTTCG 58 NA Drosophila melanogaster 61 CG16935 FBgn0033883 FBtr0087622 3 1 1 177 2R 9748785 9749142 CCATTCAGGGTAAATACCCG 58 9748627 9748645 TGATCCTCCTTGTAGACGG 58 NA Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087757,FBtr0087758 2 2 2 110 2R 9137560 9137578 ATCAAATTAGCGATGCCCG 58 9136957 9136975 CATTCAAGCTCACACCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4676 FBgn0033815 FBtr0087743 1 1 1 80 2R 9123748 9123818 ACTAGTATCCGCAAGGAGC 59 9123862 9123880 CTGACAATCCTGGCAAGAG 58 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0302321 2 1 3 122 2R 8838848 8839362 TTGTGACCGTTGACAACAC 58 8838744 8838762 CTTCGTGAAAGGATCGACC 58 NA Drosophila melanogaster 61 CG12391 FBgn0033581 FBtr0088205 3 1 1 153 2R 7037009 7037116 ATTACCTCGAGGACGATGC 59 7036874 7036895 TTCTTATTGCTTGATTCCTGGC 59 NA Drosophila melanogaster 61 CG2063 FBgn0033400 FBtr0088600 2 1 1 143 2R 5173843 5173927 CGTCCCTGGTAATCATACC 57 5173718 5173736 AAATCAGGGTGTCATCCTG 57 NA Drosophila melanogaster 61 shrb FBgn0086656 FBtr0088623 1 1 1 89 2R 5030496 5030574 CATCAGAATATGGACGTGGAC 58 5030427 5030445 AATGGCATCGGAAATCTCG 58 NA Drosophila melanogaster 61 CG8080 FBgn0033373 FBtr0088633 3 1 1 91 2R 4977978 4978056 TTGAACGAGGTATTTATTGGCG 59 4977908 4977926 TTGGTCTTGTTCACCACGT 59 NA Drosophila melanogaster 61 sut1 FBgn0028563 FBtr0088777 3 1 1 87 2R 3973575 3973836 ACTTTATTGGCGCAGAACTG 59 3973886 3973904 ATGAAATTGCACGTCCACG 59 NA Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 1 2 2 105 2R 1907043 1907121 GATATGCCAAAGAAGGAGAACAC 59 1907186 1907204 CAATCGCGTTCCACTTTCC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-525k FBgn0083028 FBtr0113538 2 1 1 61 2L 5202446 5202468 CAACTATGTAATAGGGACGAACG 59 5202483 5202507 CAAGTCATCTGCTATAGTATGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42546 FBgn0260719 FBtr0301172 2 1 1 68 2L 21589852 21589870 AAACTTCAACAGCAGGCTG 59 21589802 21589820 CTTGTTCGTTGTCTGGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319,FBtr0080320 2 2 2 100 2L 11962058 11970265 AAAGGGCAGTGAAATTCCT 57 11961976 11961994 CTTCAGTAGAGCGGTTCAG 57 NA Drosophila melanogaster 61 CG31988 FBgn0051988 FBtr0081490 1 1 1 88 2L 21202486 21202510 GAGAAGAGTACGATAACGAATTCAG 59 21202261 21202442 CTCGATTGGTAATGGGTTTGG 59 NA InUTR Drosophila melanogaster 61 CG17472 FBgn0032868 FBtr0081382 3 1 1 159 2L 20634602 20634693 GCTTTGCCCTTAGTAGTAAGG 58 20634814 20634832 TCAAGGTTACTTCGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0081270,FBtr0100597,FBtr0081267 2 7 7 60 2L 19568681 19568701 GGTGAAGATAGCCGATCTACC 59 19568641 19568660 CTGTCCCATAAAGCCAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 2 2 3 185 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123381 19123399 TGAAGAAGTGGGTACCCTC 58 NA InUTR Drosophila melanogaster 61 Cyp310a1 FBgn0032693 FBtr0081077 3 1 1 80 2L 18651978 18652053 CTAGAACCGATTAATGATGCAGAC 59 18651921 18651943 AGATACTTTCAAGAGATCCTCGG 59 NA Drosophila melanogaster 61 CG10333 FBgn0032690 FBtr0081072 2 1 1 89 2L 18607051 18607070 ATAGGGAGAAGGAAAGACGC 59 18607185 18607203 TATCCCTAGGCCTTTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Ntf-2r FBgn0032680 FBtr0081063 2 1 1 60 2L 18454876 18454896 CTACCGACTCTTTCATGACCT 59 18454918 18454936 TCCAGAATCTTGGGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 2 4 4 82 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065385 15065404 CATCAATAGCCTCCTTGACC 58 NA Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0290000,FBtr0080467 3 2 2 69 2L 13369404 13369426 TCAGTACGAGACTTTATCAAGGG 59 13369455 13369473 GTTCGTTGCTCAAATGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091679 2 1 5 60 2L 11270593 11270611 CGAGACCAACATGAACGAG 58 11270630 11270706 CTCAATGATTATCCTGAAGATGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 cmet FBgn0040232 FBtr0080215 2 1 1 82 2L 11267206 11267224 CCAGATGTCCTCAAACCCA 59 11267038 11267162 TTATCCGTTGTTAAGGGACCC 59 NA Drosophila melanogaster 61 CG6287 FBgn0032350 FBtr0080222 1 1 1 91 2L 11152202 11152220 ATCGAGAAGATGACGCTGG 59 11152017 11152150 GATATGAGATTTCTGGTGGCTG 59 NA Drosophila melanogaster 61 GATAd FBgn0032223 FBtr0079993 2 1 1 101 2L 10336984 10337003 GAAATATGATGAGCCAGCCT 57 10337061 10337153 CCTCTGATAGATCCTTTAATAGTGC 58 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 2 2 2 60 2L 10300382 10300403 CTCCAGACTTTGTCAATAGCTC 58 10300343 10300362 TAGGCATTAGCCGATTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 2 2 2 99 2L 9613533 9615312 AAGATAAGGCCGATCTCGA 58 9615375 9615393 GAGATCATCTTGCAGGGTC 57 NA Drosophila melanogaster 61 Or30a FBgn0032096 FBtr0079770 2 1 1 80 2L 9112304 9112377 TTTGGTTCGGAAAGAGTTCTG 59 9112418 9112437 CTCGTAGTAAGGTGATGCGT 60 NA Drosophila melanogaster 61 CG12439 FBgn0032094 FBtr0079767 2 1 1 60 2L 9077639 9077659 AGCGGAAGATGAAGAATTTGG 59 9077681 9077699 GCGTCCTGAGGAATAAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14273 FBgn0032024 FBtr0079605 2 1 1 81 2L 8343774 8343792 GAGATCGAATGCACGACAG 59 8343835 8344085 CGTCGATTCGTTAAGTTGGAG 60 NA Drosophila melanogaster 61 mts FBgn0004177 FBtr0079525 3 1 1 60 2L 7828107 7828128 AATGCAATCAGTTGACAGAGAC 59 7828148 7830475 AGAATCTCCTTGGCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 3 2 2 80 2L 7380995 7381074 TTGATTATGGATCGCGTTTCG 59 7381112 7381134 GTAATGAGCCACGGATATTTCAG 59 NA Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0079414 3 1 2 88 2L 7218848 7218926 GCTGAGAATACTCTTCTGATACTG 58 7218783 7218802 ATTAGTTTCGTACGGATGCT 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 3 3 6 82 2L 6688732 6688809 GCATCAACGAGATTGGTTCC 59 6688669 6688687 GGATCTGTCTAGGCAGCTG 59 NA Drosophila melanogaster 61 psd FBgn0086265 FBtr0079238 2 1 1 60 2L 5963887 5963905 GAACTATTTCCCACAGCCA 57 5963845 5963863 AGTTGTTCTGACCACATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079152 2 1 2 283 2L 5923466 5923543 AAAGTTGAGCAGCATGGAC 58 5923201 5923220 TAACTCTTTGGTGCTAGCGT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 1 2 2 80 2L 4840094 4840174 CTTGATTCTAGGTTGGATGGAC 58 4840215 4840233 AGTTTGGCCAATTCTCCAC 58 NA Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 1 1 1 87 2L 4827096 4827186 ATGGGCTATGGAATCCGTC 59 4827237 4827255 TACCAGGACGTATCACCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Thor FBgn0261560 FBtr0077524 2 1 1 88 2L 3478684 3478702 CATCTCGGATCCGATCCAG 59 3478754 3479196 TAAGTTTGGTGCCTCCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 gkt FBgn0260817 FBtr0077574 2 1 1 84 2L 3161843 3161921 CAGATTTGTGACTGGCGAG 59 3161969 3161987 TGGAACGTCGTATGGTAGC 60 NA Drosophila melanogaster 61 CG4764 FBgn0031310 FBtr0077960 2 1 1 60 2L 1151349 1151367 TACGTGTACCAACTGATCG 57 1151389 1151409 AGATCTTCTTGTACTCGATGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4552 FBgn0031304 FBtr0077956 2 1 1 95 2L 1131097 1131116 CTACTTCGGCGATCAAATGG 59 1131174 1131274 GCTGATTTAGTCTGCTGCG 59 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 1 2 2 80 2L 1117493 1117511 TCAGCAGCCAATATGTCGA 59 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA Drosophila melanogaster 61 Nnf1b FBgn0051658 FBtr0078008 2 1 1 82 2L 811134 811155 CATGCACAACTTGAATCTAAGC 59 811198 811271 TGGCCATAGCAATCTCGAG 60 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078049 2 1 5 132 2L 344478 344582 CAACAAGAGTCTCGAGCCT 59 344678 344696 AGTTCTGCCATCCAGACTG 59 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0110883 1 1 5 94 2L 1938540 1938559 CATATCGGACCTCAGTCTGG 59 1938616 1938879 TGTCATGGGAGTCAACTGG 59 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068 3 1 3 127 2L 2010196 2010215 CTATTGATTTGGTCCTCGCA 58 2010304 2026777 GAGGAGATTCCTTTATCGCG 58 NA Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077691 1 1 2 101 2L 2837259 2837277 CATGGAGAATCTGCAGCAC 59 2835535 2837195 CCGCCAGACATATAACTCAC 58 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 2 3 3 108 2L 2866730 2866820 CTGGAAGACCAAGGTTCCA 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638 1 1 3 162 2L 3372914 3372932 GACTAGGATCCTCATCGCG 59 3368186 3372789 TCTTTAATCATGAGCGTCGC 58 NA Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 1 2 2 83 2L 3473693 3473776 AACTACAATTGGCTGCCTC 58 3473821 3473841 CGAAATAGTATCCACCATGGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 81 2L 3624268 3624291 CAGCTAATTTCCAATCTAGACGAG 59 3623868 3624230 ATTCCTCGTTGATCTTTCTGC 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 1 4 9 80 2L 3884509 3886994 CAATGAATCAGGAGTCACAGG 58 3884449 3884468 ACAGTTGATTGCGTTTCCAG 59 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077485 3 1 2 161 2L 4187640 4187658 ACTGCGCATATGATACGTG 58 4187430 4187448 TTTGTTCAAACGCTCGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 2 5 6 82 2L 4192684 4192705 GAACCTTAAAGACAACAACCAC 58 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 3 4 4 67 2L 4904926 4904944 CTGCCCTCCATCTTATCCA 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077396 1 1 6 153 2L 4932037 4932055 TGATAACGGACCACACTCG 59 4912767 4931922 TCTGTTACTTCGCATTTGCTG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 2 6 6 60 2L 5047161 5047179 CAGACGTTAAGCGACATGG 59 5047198 5047287 CTTCGTTATAGATAGCTGCATTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 3 5 5 88 2L 5155461 5155480 GTTTCTGTGAGAAGACCCTG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 3 2 2 84 2L 5993335 5993479 TCAATAAGGTGCGAACTCG 58 5993269 5993288 TGAACGAACAACTCTAGCTC 57 NA Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 1 2 2 119 2L 6067223 6067294 TACTTGAGAAGCTGGTGCC 59 6067377 6067395 CAAAGCCCTGTTCCAACTG 59 NA Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 3 2 2 84 2L 6072602 6072620 CATAGATTCCGCGCTATGG 58 6072666 6072743 CTGTTGTGAGGTAAAGATGGG 58 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296 1 1 2 96 2L 6652562 6653222 TCAGAATGAAGAGGCCCAC 59 6653280 6653300 CTCTGATTGGTTGAAGTCCTG 58 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273248 3 1 4 101 2L 6680535 6680958 CAAGTGCACAGTTCTGATGG 59 6680453 6680472 CGTGTCCAAGTTCGTATCTG 58 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 3 3 3 82 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713837 6714564 CAAACAGTATGCTGTACACGG 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 3 5 5 82 2L 6791572 6791590 TTGATCTGGTACAAGGGCA 58 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378 3 1 3 105 2L 6802031 6802049 ACGTACCCATGTAAGTCCG 59 6801894 6801962 GATGCTGTGACGTTCTACG 58 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0290119 1 2 3 82 2L 6975786 6975804 CAGAACAATCGTGTGCGTC 59 6975124 6975740 ACGGGATCATTGACCACTG 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 1 4 4 80 2L 7649009 7649028 TTGAGGACTTAGTCCTTTGC 57 7648880 7648969 GCTTAATTGTACTGAAACAGGG 57 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 3 2 3 82 2L 7986007 7986025 AAGCTCGACTTCAAGTCGA 59 7986071 7986152 GGATACGTGGTAGGGTTCG 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 3 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045 1 1 2 182 2L 8992482 8992699 TATTAACAGGCTCCTGGCA 58 8992902 8992920 GAAGACCAGGCAAATGGAG 58 NA InUTR Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 1 4 5 80 2L 9535893 9535999 ACCACTATATCGATCACTCCC 58 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 3 2 2 80 2L 9654999 9655085 TAACGAACAATCGGTACGCT 59 9655125 9655146 TGTGTTCGTATATGACACTCCT 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913 1 1 6 80 2L 9819327 9825311 GCGTGGTTAAATTTGGACGA 59 9815892 9815912 CAGATTGTAGTCGTTCCACTC 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089737,FBtr0089736 3 2 4 161 2L 10264250 10264555 GAGGAAACACAAGTGACGC 59 10264810 10264828 CTCCAGGTACTGATACCGC 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 2 3 3 80 2L 10275617 10275705 CTCAATCGGCGTCTTATATCAG 58 10275558 10275576 TTATCCAGTTGCACAGCAC 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0301005 1 1 3 82 2L 10581347 10581433 CTTTCGCAAGGCCATTGAG 59 10581283 10581301 ATCCTTCGAGCATTCCCTG 59 NA Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 1 2 2 80 2L 10745705 10745795 TCTTCGATCCACCAAACGA 59 10745643 10745667 GAGATCTTCTTATGTCATCTGTGTC 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100488 3 1 10 92 2L 10817139 10822980 GGAGTTTACAGAGACGGTG 57 10817065 10817083 ATGTTCATCTCCACCACAG 57 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 1 2 2 80 2L 11092421 11092441 GATGTATGTAATCCTCGCAGG 58 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0112856 2 1 4 80 2L 11142406 11142784 CCATATTCGCGACATTTGC 57 11142344 11142364 AAGACACGTTGATGATATGGC 58 NA Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 3 2 2 96 2L 11852014 11852090 CTTTAAGCGGTCCTATCCC 57 11852148 11852168 CTGGCTAAGAAACTCTGAGAG 57 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 2 3 5 81 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271636 12271654 GTGTATGGGACTATTCGGC 57 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 1 2 8 164 2L 12536412 12536430 GACCTTGACCGATGAACAG 58 12477158 12536285 CCAGATGCACTTTCAGTCTC 58 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 3 2 2 60 2L 12693378 12693396 ACTCCCATCCAAACATGGT 58 12693482 12693501 GCATCATCAAAGGTCATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0113039,FBtr0089910,FBtr0113040 2 4 9 109 2L 13261685 13271306 AGTTCTGGGTATGGACAGC 59 13271378 13271397 TAGGTGAAGGGCTTCTTGTC 59 NA Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 2 2 2 80 2L 13971670 13971748 CGATTGCTATCAGAAGTGCA 58 13971789 13971809 TCATGGTAGGTATATCCCGGA 59 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 1 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 1 3 4 80 2L 16313443 16314464 TAGACGATACGAAGATGTACGA 58 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 1 2 2 80 2L 18010982 18011003 TCCAAATGAGTATTACGGAGAC 57 18010855 18010943 GAATACTCCAACAGGAATGGG 58 NA Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 1 2 2 81 2L 18712241 18712259 GCGTGATCTATGCCAAGAC 58 18712100 18712196 CGATAACAGATCACCGCCT 59 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 1 2 4 194 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387584 19387602 CCGATAGATCCGGAAGCTG 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 1 3 3 122 2L 19437119 19437676 TCTTCTAGAAGCGGAGACG 58 19436947 19437034 GCGTAGTACCGCTTAATCAG 58 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 1 3 3 80 2L 19457150 19457231 GATGATTGCTCTACTAGTGACCT 59 19457270 19457289 GCGTTGAAGACCCAATTCTG 59 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 2 2 2 81 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488501 TAGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 2 2 2 271 2L 20349194 20349212 AATACGCCCAGAAGAACGA 59 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 3 3 7 142 2L 21125431 21126168 AATCATCACCTGACTCGGA 58 21126272 21126292 TATATCTGTGTCCGGATTGTC 57 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081504 1 1 3 101 2L 21138021 21138720 CTTGATCAGGGAATGCGTG 59 21137938 21137956 TAATTGGCCTCTCGTCAGC 59 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958 3 1 3 105 2L 22354960 22363438 ATTATCCTGAATGCTGGCC 57 22363507 22363525 GGCGATAATGTCGATAGCT 57 NA Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 2 2 2 60 2L 22690658 22690679 GTATTAACCCTGAAATGAGCCG 59 22690619 22690637 AACTCAGAATAGCGTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 2 1 1 69 2L 1789358 1789381 GAGAATATGGACAAGGATCTTGAG 58 1789254 1789273 TAAATCTACGATGGCTGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CR42546 FBgn0260719 FBtr0301172 1 1 1 60 2L 21590378 21590399 CAACTTCGATTTGACATATGCG 58 21590288 21590306 CTCACTCCGTTCGTATTGC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 3 5 5 80 2R 580804 580822 TCAAGGTTTGGTTCACCCT 59 580663 580761 CGATGAGCAGACTCTATCCT 58 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 3 3 3 103 2R 979973 980042 CGTATTCAGACCAAACCTGG 58 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 2 3 3 81 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082,FBtr0111057,FBtr0111059,FBtr0111083 2 4 59 89 2R 3219877 3230846 AAAGTCAACGTACCTCCCA 58 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111052 2 1 59 80 2R 3236477 3242406 TATCCAGTACCCTTCTTTAGATGG 59 3236420 3236438 CACACGGTCATTTAGCACC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082,FBtr0111057,FBtr0111059 1 3 59 80 2R 3233431 3233449 GGGTCTTCAAGTGCATAGC 58 3219874 3233387 ATCTGGGAGGTACGTTGAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111086 1 2 59 80 2R 3247508 3249237 GATTGGTCATCACAGAACCG 59 3247447 3247467 GAGTGAGAGTTATGTGCTCCT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 1 2 59 98 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236472 3243203 TTGTACCATCTATAGAAGGGCA 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 2 2 3 153 2R 3613394 3613412 CCTGAATTCGTACAGCAGC 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 3 2 2 60 2R 3679897 3679916 TCTCCGTTGTGGATCTTACC 59 3679856 3679876 GCCTTGATTTCGTCATAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 1 4 4 80 2R 4370526 4370649 CCCTGGTTTGTGGAATTCTG 59 4370465 4370486 GGTGTAGTTATTGTACGGAGTG 58 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 3 2 3 138 2R 4619311 4619677 ATTCAATATGCAGTCCGGG 57 4619191 4619209 CAGCGGCTTTAGTACACTG 58 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 1 1 1 147 2R 4788480 4788498 TTACGGAACGCTACAGACC 59 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273384 1 1 2 137 2R 4858553 4858944 ACGGTCGGAAGATTCAGTG 59 4858434 4858452 TCTTGGTGAATAGGCCCAG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 1 4 12 80 2R 5003945 5004691 ACCAAGTACAAGGAATGTGAG 58 5004732 5004751 GATGTTCAGAAACGACAGGA 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089933 3 1 5 101 2R 5066720 5073630 AAGATCCAAAGCCATCATGAC 58 5066639 5066658 TTAATGAAGGACGTCTTGCC 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088604,FBtr0112897,FBtr0088602 2 3 10 95 2R 5144979 5144997 TGTATCGTGGTAGCAACGA 58 5143202 5144922 ACTGTGGTATAACCTCCACAC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 2 4 5 111 2R 5423495 5423513 AGAGTTGGAGAAGGTCAGG 58 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 2 1 1 60 2R 5636332 5636350 TTGGTTCTTTCAATCGCCC 58 5636428 5636448 ATTCTATTCGACATTCCAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 2 2 2 106 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860097 GACTATCTCTGACGATCTGCT 58 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 3 4 5 98 2R 5948860 5949131 TTTCACAACCGTAGTGCTG 58 5949193 5949211 ATTGACGTTGGTGTTGTGG 59 NA Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 1 2 2 83 2R 5955471 5955492 TCTAAAGGTATCCAATCTGCTG 57 5955356 5955374 GGATTGCTAAACATGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 3 3 3 123 2R 7855431 7855450 CTGTATTCACGGGAAACTCG 58 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 1 1 1 113 2R 8079383 8079401 ATCTCAATACTCGGCCTCC 58 8079539 8079557 TATGTAGGTCATCGGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917 3 2 3 165 2R 8274925 8275428 TAATAATGGCCGGAGTGGT 58 8275914 8275935 GACATAGGGAATATTCGAACCA 57 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0087917,FBtr0087916 3 2 3 89 2R 8276583 8276769 CGATCACTCTTACCTGACTG 57 8276821 8276839 TAGAATCCCTTGGCATGTG 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087879 2 1 8 84 2R 8561422 8562505 AGTATATCAGCAGTCAGAGACG 59 8560800 8560818 TCGAATAGCACATCCTCCG 59 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 3 4 4 80 2R 9074416 9074493 TCAGTAAGATCACGCAGGAG 59 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 2 9 15 137 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 1 3 5 81 2R 9846756 9846774 CAGCAGCAATGTGAACTCG 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 1 2 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10181606 CTGCAGAATATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 3 3 3 81 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251532 10251550 GTGAGGTTGTACTTGAGGC 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112587 2 1 4 172 2R 11304183 11304201 GAGGATCGGGAAAGGATGG 59 11304336 11306867 TTACCGAAGAACCTGTCACC 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 2 4 5 85 2R 11826749 11827422 CTTATGAACAACCACATGAACC 58 11826685 11826704 GGCATAAAGCTGTTCATCAG 57 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 2 2 5 80 2R 12020077 12020098 GACCTTCCTTCATCTATCTAGG 57 12020138 12020350 CAAACTTGTACGAGATGTCG 57 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 2 2 5 100 2R 12021097 12021115 TCAACAGCAATTCGGTTGG 59 12021177 12023540 CACCACATACAGCAGTATGTC 58 NA Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 3 2 2 84 2R 12153287 12153306 AAACTCTATCAGGATGCCGT 58 12153350 12153431 GCATTACAACTGTCAGTTTCGT 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 1 3 4 80 2R 12747015 12747035 ATGACAAAGATGAATCCGACG 58 12747077 12747153 CGCGTATTTGTTCATCCGT 59 NA Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 1 2 2 88 2R 12909216 12909234 GGATGTACATCGAGCAGAG 57 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 2 2 2 80 2R 12945341 12945423 GGCATCTCTTATATGTCACCC 58 12945462 12945483 ATCCTCAGGATACATTGTAGTG 57 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0301482 1 1 7 93 2R 13163485 13163503 GACACCGAATGCAAGTTCG 59 13163557 13193501 TGAAACTTACCTTGATGCTGTC 59 NA Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 2 1 1 66 2R 13455639 13455657 CACTGGAAAGATCCTCACG 58 13455204 13455222 AACTCGAGCCATTGTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 2 3 3 91 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563333 13563425 CTAATGGCCTGGATTTCGTC 58 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840 3 1 3 103 2R 13574429 13574766 AATCCTCACCGAAAGGGAG 59 13574832 13574851 TTGGATGGAAGTAGAGCACC 59 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 3 3 3 92 2R 14007593 14007612 AGCAACAGTACGAGTAACAC 58 14007460 14007539 GAAGTTGACCTCAAAGTCCA 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 3 3 6 81 2R 14169393 14169478 CAGCAACAGATGATAGCCA 57 14169330 14169348 GATTTGAGTTGGGCTCCTG 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 3 2 8 98 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312532 14313480 GGAACTCAACGCTTTAACGT 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 1 2 3 86 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911807 14911825 AGGCTATCAGATGGTGCTG 59 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 3 3 3 81 2R 15010463 15010484 GAATAAACGCTACAACAAACCC 58 15010304 15010422 ATAAGCAGGTTGCATATGCA 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 2 5 12 169 2R 15062803 15063700 CAATTCACTTGGACCACGC 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 2 8 12 80 2R 15064179 15064197 TTAGTCACAAGCAGTGCCA 59 15064237 15064456 GAAATGACGTTAGTTCCATGGAG 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 1 3 3 80 2R 15554183 15554201 TCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 3 4 15 149 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910961 16910979 TTGTCTAGTGGTTGCTCCC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 1 7 15 109 2R 16910991 16911009 CCAATGGACATGCAAGCAG 59 16911080 16911489 CAATTTGGACGTCAGTTCCTG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 2 2 8 126 2R 17186892 17191400 GTGGGAGTGAGAACATAAATCG 59 17191487 17191505 GTAAGATGTCGGCTGTCCA 59 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 2 4 5 176 2R 17202259 17202341 TATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 3 2 2 116 2R 17373768 17373847 TTATTAAGTGCGAGGACTGG 57 17373926 17373944 AAAGATCGAGAAGTGGCAG 57 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 3 2 9 98 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399677 17399911 TCGGAAGTACTTGACGTAGC 59 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299553 3 1 5 183 2R 17949076 17955939 AAACTAGCAAGGCAACTGG 58 17956084 17956104 TCACATATGAGTAGGGTTGCA 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849 3 1 4 183 2R 18195756 18199213 TCCAACCGTCTAGATCTGG 58 18188393 18188412 CAACCACAATGAGGAACAGG 59 NA InUTR Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071816 3 1 4 173 2R 18210520 18212687 GACATTTCTGGTTTGCCCA 58 18212824 18212842 CTCTCCAGAGTTCAGCTCG 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 1 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213337 18213357 CGTAGTCATATTGAGAGTCGC 58 NA Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 1 1 1 68 2R 18535710 18535728 ACTAAACCGCATTGTGGGA 59 18535600 18535621 GGCACATAGTAATTAAAGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 1 4 4 138 2R 18693054 18693179 CACTAAAGTTACAGTCAAGTCCAG 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 2 4 4 139 2R 18693056 18693180 CCACTAAAGTTACAGTCAAGTCC 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 1 8 13 140 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 4 5 115 2R 19452573 19484433 GGTCAACAAACAGTATTCGG 57 19484508 19484591 GTGTCATTTCCGTCTTTATGTC 57 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301262,FBtr0301263 2 2 2 60 2R 19487330 19487410 TCCAACAAGAACATATCCAAGC 59 19487291 19487309 AATGTATGTTCTCCTCCGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 2 4 4 60 2R 19487892 19487970 TCCTGCTAAACGTCAATTCAC 59 19487852 19487870 GTTAAGTTCCTCGCCTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072139 2 2 4 84 2R 19810487 19810507 ATGATGGAACAGCGTAATCAG 58 19810550 19811543 GGTCTACAATTGTTTGAACCAC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 1 2 2 100 2R 19971098 19971186 CCAGCCTTTGAACTTAAATCCA 59 19971247 19971265 TTGATGCCGACATTCTCCT 59 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0072252 3 1 2 110 2R 20007769 20008246 TGCGATTGGGATATCTTAACC 58 20008318 20008336 GAACATGCTCGTAGGAAGG 58 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273 1 1 2 91 2R 20046736 20046754 TTTCTCCGACAGATCAGCA 58 20046600 20046683 TTCGAGAAAGCACATATCCAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273 2 1 2 60 2R 20046702 20046721 AAAGCTCACAATGCTAAGGT 57 20046598 20046681 CGTTCGAGAAAGCACATATCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 2 2 3 81 2R 20484168 20484189 CTCTGGCCTATATGTGAATGAG 58 20484231 20484302 GTCGTCCAGAGTCTTCTCC 59 NA Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 1 2 2 193 2R 20487184 20487202 ATCCAGCTGAGTACAACCC 59 20486890 20486908 GAACACGTACTTGTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 2 1 1 61 2R 20556263 20556284 TGAGAATATACAAGAGCTCGGA 58 20556167 20556185 TCCAATGGGTAGTTGGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 3 2 8 102 2R 20885209 20885809 GTGCTCATTAACTTCTCGGTC 59 20885127 20885149 CCATCTTCAATCCATTGACTACC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092 1 2 3 92 2R 20925046 20925237 ATTCCTAGACACATCCAAGGA 58 20925291 20925309 TCCATATACGCCTCGTCTG 58 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 3 4 4 178 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979237 20981813 AGACCAAACATATGTGGCG 58 NA Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 1 1 1 73 2R 6151191 6151209 TTCAAGTCACACCCATGGA 58 6151073 6151092 TTGTACTATTGCTCAGTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 2 1 1 61 2R 17520970 17520988 CAGGTGCATCTTGTAGCTG 58 17520829 17520848 AAGATGGTTCGGTTGATGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 2 9 9 80 3L 143206 143522 TTTGTCCATACGCCAAATCG 59 143564 143583 GTTCTCAATAGCTTCCGACC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 3 9 9 80 3L 142813 142833 CTGCTTAGTGCAGAATTAGGC 59 142873 142956 CAGGTCGAAAGAGTTCTTTGC 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 1 2 3 80 3L 147874 147949 GTATATGAAGCTTACTAGCTTGCG 59 147988 148006 GTTGTGGCCATGAAACAGG 59 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 1 2 2 107 3L 151927 151945 CAATGGTAGCGAAGAGCAC 59 151781 151860 CATAAAGTATCCCGTTCATCAGG 59 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 2 3 3 80 3L 185058 185138 GAACATCTTTCAGTACGCTGG 59 185178 185198 ACCAATTTAGGAGCTAGACCG 59 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 1 3 3 148 3L 224170 224977 ACTACGAAGTGAAGTCGCA 59 225089 225107 TTTCGCATAGATGGTGGCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0113121 2 1 2 94 3L 991028 991098 TTCCTGCGCAAGAAATTCAC 59 991154 991173 CGCCACATGATTAGTCTTCG 59 NA Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 3 2 2 110 3L 987333 987351 GAACTACGGCACCAATCTG 58 987424 988752 GAACGAACAATCCTTCCGTG 59 NA Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 3 2 2 82 3L 1035388 1035409 GAACAGGATCATTCGTGAATCG 59 1035452 1035568 ACTGCCATCCCTTCATCAC 59 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 3 2 3 80 3L 1254260 1254278 CAAGAAGCCAAAGGTCGAC 59 1254321 1254413 TCACAGTCGTCCACATTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 3 2 3 157 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1272984 1273004 CGTGGTATCGGCAATATTGTG 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 1 2 4 110 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346352 1346370 ATCCCGATAGCGATTCAGG 59 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 2 3 3 80 3L 1539120 1539207 AGAATCTGTATAGATGTCTTCCTCG 59 1539240 1539263 CCTCGTAGAGTATGTTGTATACGT 59 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0072774 2 1 2 82 3L 1757189 1757312 GAAACAACCACAGAGGTTGAG 59 1757356 1757374 TCTACTTTCTCGCGGTCAG 59 NA Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072844 1 1 2 149 3L 1964602 1965085 CCATCAAGGCTATTGCGTG 59 1965198 1965216 TCATCTTCTCCGGAATGCC 59 NA Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 1 2 2 80 3L 2244946 2244964 CGTCGAGCAATACGAATCC 58 2245008 2245085 GGCAGTATCAAGTCCATCG 58 NA Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 3 2 2 80 3L 2389944 2389965 TGTTCAGAGGAATGGATTACCA 59 2389825 2389905 TGGCTTGATAGTAGGTCTGTC 59 NA Nonspecific Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 2 6 15 80 3L 3083798 3085210 GCCACTTATATGGTCACGC 58 3085252 3085272 ATATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 8 15 89 3L 3080026 3083748 CAGATACGGCTGCTATGGA 59 3083798 3084817 TCTGTCGATTCATATAAGTGGC 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 1 7 13 127 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153 3 1 4 146 3L 3832411 3832430 AAGAATCTCGGTGGAAGCTC 59 3832539 3832615 TGATTGATGAAAGACGCGC 59 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 1 3 3 89 3L 4224985 4225005 GGATATGGGCAACTACAAGTG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301097 2 1 4 88 3L 4563896 4578765 ATACGTAGACTTGCGGACG 59 4578816 4578835 ATTATCACAAGAGCCACGGA 59 NA Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 2 2 2 80 3L 5556486 5556601 GTTCATAAGGTTCCCGTGC 58 5556424 5556444 TATGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 1 2 8 80 3L 5669984 5670004 GAATTGTTCAACAGGCTTCCA 59 5670044 5697040 GATCATCGTCCGAAATCTCTG 58 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 1 2 2 80 3L 5810733 5811005 CTCACCAGTTCACTTTCCC 58 5810671 5810689 CAGGTGCCATTATGGAAGC 59 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 3 2 2 81 3L 6540630 6540649 TAAATGCCTCGGAAAGTCCA 59 6540691 6541796 GAGATAGTATCGCTGCAACAG 58 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 2 4 4 80 3L 6685395 6685482 CGTAATAACCGGTCTTACAGC 59 6685335 6685356 CGGTATTCCGAGAAGTTTAGAC 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114,FBtr0301958,FBtr0301108 3 4 11 172 3L 7042047 7043273 CTTCTCAATACGCCAACGT 58 7043785 7044350 TTCTGTACCCTGGATGAGAG 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 2 9 9 81 3L 7176524 7176543 AATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 3 2 2 200 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327806 7327824 TTATGATCGTGCCCAGGAC 59 NA InUTR Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 3 2 2 150 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328865 7328884 CTAGCGATCTCTTGACCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 1 5 5 98 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870 2 1 2 170 3L 7369000 7373730 ATGAGCTTAGGCTACTCGT 57 7368848 7368866 TAGTGAGCCGGTTATTTCG 57 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499 2 1 7 159 3L 7809700 7810544 CGAGTCAAATGAGCTCAAGG 59 7809489 7809509 CACCTCCTGATGTAATGTTGC 59 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 1 4 5 179 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347121 8347139 TTGTGAGAGTACCAGCGAC 59 NA Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076615 3 1 2 165 3L 8420493 8422148 ACGACACTGAGGACATTGG 59 8422276 8422295 GCATAGAGATCGTTCTGCAC 58 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 1 2 2 61 3L 8670531 8670551 ACTCAAGACTCTGATTCTGGA 58 8670711 8670729 TTTCCAATTTGGAGTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 1 2 4 80 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330138 9330158 AGACCATGAGAGTTCTTCGAC 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 1 3 6 84 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 3 2 4 103 3L 9346898 9346919 ATTGGACTGGAACAAGATTCAG 58 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 Hsp22 FBgn0001223 FBtr0100558 3 1 2 60 3L 9366175 9366194 CAGCCAGCATCAATATACCC 58 9366280 9366301 GCAGATCCATCCAGATTTAGAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 1 3 3 122 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 2 12 12 87 3L 9773788 9773876 TCCTCATGAGATCTTTGTGCA 59 9773925 9773943 ATACTTGATCCAACGGGCC 59 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349,FBtr0076352,FBtr0076351,FBtr0076350,FBtr0076348 2 5 5 60 3L 9966736 9966754 CTGAACCTCTACACCAACG 57 9966778 9966796 CATAGTACTTGGGCTCCAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 1 2 2 80 3L 10090895 10090913 ACCAGGAGGATGCTTTCAG 59 10090284 10090854 GAGATAAAGATGAGACCAGCTG 58 NA Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 3 1 1 100 3L 10145142 10145160 ATTAAGTCGTGTCATGGCA 57 10145273 10145291 AAATAGGCCATGTTCACCA 57 NA DesignNoJunction Drosophila melanogaster 61 ect FBgn0000451 FBtr0076305,FBtr0076307 3 2 3 146 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10184871 10184890 TCCGTGGACATATCGATGAC 59 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076264 3 1 3 81 3L 10681685 10681798 CAGCTCTTTAGAGGACTTGGT 59 10681840 10681859 CCATGGCCATTTGGTAAGAG 59 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 3 3 3 80 3L 11064017 11064035 ACCGGTTACCTCAATCTGG 59 11064077 11064162 GAGTGGCGAATTCTTTCTCAG 59 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 2 2 2 103 3L 11143173 11143248 GAAATGTGTTGTGGCAAGAC 58 11143089 11143107 TTGTTGGAGGACAAAGGTG 57 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 2 3 4 80 3L 11769480 11769501 TCGTTTACACATTCTTTCACCC 59 11769359 11769441 GCTTCACCTCCTTTATCTTCG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 2 2 6 65 3L 11811197 11811215 TGGTACACAGTCGACAAGG 59 11810715 11810734 CATATCATCGTTCACGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 3 1 1 98 3L 11822642 11822660 CAAACAGCGTCTTTACGGG 59 11822778 11822796 AATTTCTTGTCGCACTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 rols FBgn0041096 FBtr0076054,FBtr0076055,FBtr0076053,FBtr0076056,FBtr0076057 1 5 5 193 3L 12021961 12048294 GATCTCCAGTCCATCCGAC 59 12020252 12021805 CCATCAACATCTTTCAGCGA 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 3 4 6 119 3L 12205860 12206204 TTCTACGACGAGTCCAATCC 59 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010 1 1 2 80 3L 12266715 12267115 TTCCCATCGTCAGATGAGC 59 12266653 12266671 AATCTTCTGGAAGGGCGAG 59 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089322 3 1 3 183 3L 12494122 12494265 TTTAAAGAAGTCTCGCTGTGAG 58 12493886 12493981 GTATATGTCCCACAGCTTTGTG 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300887 2 1 4 88 3L 12531667 12532104 AACGTGGAGAAATCAAGGC 58 12531536 12531555 CTTTACCCGGACATTCAGAG 58 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 2 2 2 105 3L 12698330 12698349 ATCTGAAGGAGAACCTGGTG 59 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851 3 1 2 90 3L 13436080 13436411 ACTCTGAATGATCTCCTCCAG 58 13436462 13436481 ACCTGTGATCCTTGCTAGAC 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075820 1 1 4 128 3L 13460965 13461555 AATGTCCTACAGGCGTCTG 59 13460855 13460873 TAAGTGAACTGGACGAGGC 59 NA Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 1 3 3 112 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033094 14033177 GGCTTGTTAAAGACCTGCTC 59 NA Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 3 2 2 61 3L 14045127 14045145 TCTCTAATACCCACACGCC 58 14045170 14045188 GATCTCCTGACCCAGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 1 7 7 80 3L 14407794 14407882 GGCTAAGGAAATTACGATCCA 58 14407734 14407755 ATTCGATCACCCTTCTTTAGAC 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 3 4 4 88 3L 15593708 15593797 CAAGTTCAAGGTCTCTACGA 57 15593848 15593866 AGTACTCATAGTTGTCGCG 57 NA Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 1 2 2 153 3L 16126325 16126398 CAAAGGGCAAAGAGACTGC 59 16126513 16126533 CAATTTGGTTCTGTGCATCCA 59 NA Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 3 2 2 100 3L 16135210 16135228 ATGCTATCGGTACAGACGG 59 16135004 16135150 CTAAATTGATCCCTATCATCGGG 58 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 3 2 2 80 3L 16392306 16392325 AAAGGTCGAAATTCCGAGGA 59 16392176 16392264 AAGGAGATCAGCGAGTTCTG 59 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790 1 1 2 97 3L 16624520 16639917 GCATAACGGTACCAAGCAC 59 16622271 16622290 GAATGTGAGGTAATGGACGC 59 NA Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 2 2 2 88 3L 17037746 17037822 GATTACTTTGATCGGAGATGTACG 59 17037681 17037702 GCTTGACTATGAACTTGTTGCA 59 NA Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 2 2 2 98 3L 17393991 17394009 ATCGTGTTATCAGGACGAC 57 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 3 3 7 81 3L 17535994 17536012 GATGTGGATCATCGTCAGC 58 17536057 17536617 CGGTGTCTTCATTCGATGG 58 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 3 2 4 144 3L 18668070 18668329 GTCCATACCAGATGAGCCT 58 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 3 4 4 80 3L 18824236 18824260 GAGTACTGTAATCTACACAAACGTC 59 18824116 18824198 GCCAAAGTGTAATCTGCGG 59 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 2 3 3 85 3L 19252661 19253225 CATTCTGGCAGGTTATCCG 58 19252594 19252614 CAAAGAACATGTGATGCACTG 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075013 1 1 12 175 3L 19311969 19311987 CAAACTGAACAGTCGCCTC 59 19303884 19306261 TATATCCGACCTTCTGGCC 58 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 3 4 4 110 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620469 19620547 TAGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 2 3 3 82 3L 19789420 19789440 GGCCACTATGACAGTAATGAC 58 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 3 3 4 105 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254040 20254058 AGGTTCTGGAAGATCTGCC 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078187 3 1 5 135 3L 20379947 20381779 GCTTATGTCGATGCCATGG 59 20381877 20381896 CAAGTAGCGTCGGATATTCC 58 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078254 2 1 3 104 3L 20792065 20792083 TCATCTGTCCAAGTCTCGT 58 20792305 20792323 TCTTGATCTCCATGCCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 3 2 2 117 3L 21189473 21189553 ACAATAGAGCAATGTGACTTGG 59 21189377 21189395 TAAGCGAAGGTTCCTCCTC 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 CG32448 FBgn0052448 FBtr0290247 3 1 1 85 3L 21821173 21821191 TTCGAGTTGTACACCAAGC 58 21821040 21821058 ATATACGCGATGTAGCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 1 3 3 80 3L 21830926 21830944 GAGACCATGAAACTGGTGC 58 21830811 21830882 CTTGACGAAATCCTCGTCC 58 NA Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 1 1 1 60 3L 22463861 22463883 CAATATGCCATCGTAAAGGATCC 59 22464973 22464993 TTCCAGATTAGACAAGAGCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 2 5 5 85 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776575 22776594 GGTGCTCGTTCATTTGATCC 59 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 2 3 3 143 3L 22870965 22871045 TTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 2 4 4 115 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 1 2 3 76 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24535533 24535551 TGCTAACCGCAGTTACTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 3 5 5 132 3R 66124 66142 TACGAGCAAGAGGACTTGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 2 2 2 82 3R 240299 240317 AGGTGGAACTGCTATCGTC 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078942 2 1 4 118 3R 272156 272174 TGTATTTAGCGCATGGCTG 58 270275 271896 CATGAACCATTCTCCGGGA 59 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 1 4 4 88 3R 293415 293433 TCTACTACATGATCGCCGC 59 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 1 2 2 104 3R 359130 359148 TTGTTGTGCATCTAAGCCG 58 359277 359295 AAGGCTAAGGGAAGATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 3 5 5 84 3R 452847 452870 CGATTGACTGGTATAAAGATAGCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 10 10 91 3R 561270 561374 GATCTGCATGTGAAATACGAG 57 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078764 1 1 2 159 3R 1324582 1327767 GCTAACAAAGGAGAGTCTGC 58 1319155 1319173 TCCTAGCTTGATGTGTCCG 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733 2 2 3 117 3R 1472926 1474227 GAGTCGGAGACTATGTTTACG 58 1472829 1472847 TAGAAGCACATGACCTTCG 57 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 2 3 12 92 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 3 1 1 98 3R 1628932 1628950 TTCATGCAGCAATCACAGC 59 1631968 1631986 GTAGCGCAGTAGATAGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 2 2 2 94 3R 2037879 2037897 CCATTCGAGTACTCCGAGG 59 2037955 2038122 GACTTGATGAAGCGTTCGG 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 2 4 4 81 3R 2182250 2182268 GTGGTTCGACAACACTACC 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0091512 2 1 2 81 3R 2973447 2973468 CAACACAGATGGGATCATTGAG 59 2972802 2973409 TGTGTAGATGGGTACAATAGAGC 59 NA Drosophila melanogaster 61 CG10928 FBgn0040522 FBtr0081746 1 1 1 135 3R 3635214 3635232 ATTTGTGAACGCTTTCCAC 57 3635468 3635486 TCGAATCGAAAGAAACCGA 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807 1 1 2 119 3R 4064536 4064554 CGGTATAATGGCCTGACCA 59 4063957 4064456 GTTTATTATGCAGTGGAGGGTC 59 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 1 2 3 80 3R 4542277 4542622 AAGCAGTGGAAGAGTCCAG 59 4542666 4542684 GTGTTTCGGCTTCTCTACG 58 NA InUTR Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 3 3 3 97 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064804 5064822 TGTTCAGGTTGACGGATCC 59 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0082064,FBtr0082065 1 2 4 80 3R 5348543 5348564 AACTGGCACGAATAATCTTACC 58 5348604 5349933 ATGCCAGAGACTTGATTGCT 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 3 4 4 81 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592835 5592908 GATCATGTTGTGCAGATGCT 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 2 9 9 80 3R 5845281 5845302 GTTTATTCCCGAACTCAAGGAG 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 1 5 9 80 3R 5834567 5835034 TCTACGAAGGTTCAAACCG 57 5834505 5834523 GTCGGTGGATATCTCAGTG 57 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 3 5 5 90 3R 6041343 6042795 TGGATGAGATATCCGAGCT 57 6042847 6042867 GCGCTTATGATATACTCTCGT 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 1 3 4 83 3R 6121773 6122463 GTGGCTGAAATCTTCACCG 59 6122510 6122528 TTCAGGGTAATCGAAGCCG 59 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301310 2 1 4 140 3R 6589659 6589837 TTCAAATGCATACAGCAGGC 59 6589937 6589958 CCATCTCAATGATATTGAGCGT 58 NA Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 1 1 1 74 3R 6995716 6995736 TCAGAGATGTGTTTATCCCAG 57 6995590 6995608 AATTCATTGGTCCGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 1 2 2 80 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361495 7361513 GGTGAGATTGATGTCGCTG 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 1 2 6 80 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628404 7629450 GACCATACATATAGTAGAACGCC 58 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082473 3 1 2 185 3R 7645326 7645344 GATCTGTCATACCCGTGTG 57 7645559 7645577 GAAGTACTTCTCGTAGCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 2 3 3 175 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450611 8450690 GGTTCTCATAGTTGCCCTG 57 NA Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 3 1 1 67 3R 8462367 8462385 TCGTGGTAAAGATTACCGC 57 8462470 8462488 CTGAGTAGCCGTACTTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 3 1 1 138 3R 8822322 8822341 ATCGAGTACTACAGTGTGGA 57 8822499 8822517 GGTCTGATGTAACTCGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 3 5 5 82 3R 8845522 8845622 GAAATACACGAGAAGGTCCT 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082773 2 2 3 93 3R 9158532 9159622 TTTAGCACATGCTTCCACTC 58 9158458 9158476 GTGTTTACCTGGCATCCTG 58 NA InUTR Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 1 6 6 80 3R 9204503 9204740 TTGCCCTACATCTACAATCC 57 9204442 9204461 GTCCAGTTCACTTACATCGT 57 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 3 3 4 80 3R 9257247 9257399 TCAGCTCAGTGTTAAGAGC 57 9257185 9257205 GATGGATCTTTGACAATGGAC 57 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 1 8 8 81 3R 9487885 9487905 ATTCGAAGACTATCGTGATGC 58 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 2 2 2 82 3R 9514941 9514959 CATCGTAGAGTTCTCGCCT 59 9515005 9515098 TCAGTAGCATACGCTCCAC 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 1 3 5 80 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522056 9522557 TCGTAGTTTGTATCTATCCGGA 58 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0301351 1 1 2 92 3R 10039716 10039734 CAAATGGCTACGATGGCAC 59 10030144 10030487 GGAAGATGCCAACTATTGTATCC 59 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 2 5 5 80 3R 10090933 10090955 GATAACCTTGTAGTTGATGCCAC 59 10090815 10090894 CGAATAGCAATTCGGCTCAC 59 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 3 3 3 113 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452027 CTCAAGGAATACCTTTAGCACAC 59 NA Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 1 2 2 80 3R 10496132 10496233 ATAATCAATGCGCTCTATGTCC 58 10496073 10496092 GATTTCGTTGCTCTCGTTCC 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129 1 1 3 203 3R 11087616 11088283 TCACAATCAAGCTGGAACG 58 11087431 11087449 TGCGTCTATCTACACTGGA 57 NA DesignRelaxed Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 1 3 13 89 3R 11120956 11121154 ATGAGAGCGAACGGATACG 59 11121207 11121225 CTTGCGCTAACTGGTTCTC 58 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 3 2 2 68 3R 11170641 11170659 TAAGGTCGACATAGCGGTG 59 11170526 11170544 AGAATGGAGTAGGCAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 2 5 8 102 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 2 2 2 80 3R 12852789 12852809 ACTTTGATTCCCTGACCAGAG 59 12852851 12852930 AGTGCTTGATCTGTCGGTC 59 NA Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 2 2 2 80 3R 13216263 13216281 TATGAGCTTGGTCGTACCT 57 13202972 13216221 GATGTATAAACACGGGTCCAG 58 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 3 4 4 83 3R 13678332 13678350 GTCGATCTGGTACGGAGTG 59 13678396 13678746 AAAGAGCATCCCAAGAACCT 59 NA Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 3 1 1 129 3R 14231126 14231145 AGGATCCCATCAAGATTGTC 57 14231300 14231318 TAGTTGTCGTTCAGGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 3 3 3 80 3R 15070676 15070761 TTTACTATAACTCGTCGCAGC 58 15070616 15070634 GAGCACCATCATGATGACC 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0083765,FBtr0110915 3 7 8 111 3R 15418744 15418762 AACCCAATACCCTCCAGAC 58 15418835 15420231 CTTGAGTTCTTTGAGTTGTGC 58 NA Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 1 1 1 98 3R 15742826 15742844 CTTCAGTCTGCACTGTGGA 59 15742691 15742709 TTTCCCGCTGTTATGTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 3 1 1 100 3R 16569367 16569388 GAAGATCAGATGCTCAATATGC 57 16569231 16569249 CGAATCTTGCCCTCAAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083958 2 1 8 93 3R 16598596 16617476 ATGGAACTGAAATGGCGGA 59 16617533 16617551 TAATCCTCTGTACGCTCGC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 3 4 9 114 3R 16792914 16798905 GTGAACTCAAGGTTGATTTCGA 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263 1 1 3 97 3R 17693193 17693211 TGACCTCTCCAAACAGACC 59 17693036 17693132 TAGTCTCTGGTCCCTGGTC 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 2 6 6 70 3R 17705051 17705070 CGAACCCATTAGAGACATCC 57 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209 3 1 5 183 3R 18182762 18183263 TACGAAATCCGTCTAGCCC 59 18184107 18184128 CAGGAACAATAATTTGCCAGAC 58 NA InUTR Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084219 1 1 3 183 3R 18215782 18216920 TTGAAGAGCAAACTCTCCC 57 18217129 18217147 ATTCCAACTCGGATTGGAC 57 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084219 2 1 3 183 3R 18215783 18216921 TGAAGAGCAAACTCTCCCA 58 18217129 18217148 AATTCCAACTCGGATTGGAC 58 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 3 3 3 118 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380653 TTCTTCATGTACTCGGGTCC 59 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0084368,FBtr0084369 2 2 3 81 3R 18949045 18949063 TCCAGTGACGGAAAGAAGG 59 18949107 18949181 GTTGTGTCAATCGGAGTAGC 59 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0084368,FBtr0084369 1 2 3 80 3R 18949093 18949168 GCAGACATTGTAACGCTACTC 59 18949208 18949228 CTCATCTTCGCCATTGTACTC 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 3 2 2 134 3R 19655748 19655912 GCATTAAGGGTCAAATCTACG 57 19656008 19656026 GAATGATGTAGCCATCGGG 58 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 3 2 2 80 3R 19723179 19723198 GGACACAACTACCTGTAGTC 57 19723058 19723137 ACACATTGTACCATATCGCT 57 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089497 3 1 3 99 3R 19762363 19763161 CAACTACCATCTGCTTGAATCC 59 19762285 19762303 CTTCTGGAACGACTCGGAG 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 2 2 3 94 3R 19977633 19977653 GCATCGGAATGGAGTAATAGC 59 19977483 19977580 GTATTGATTCTCTGTTCCACGC 59 NA InUTR Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273323 1 1 2 157 3R 20175810 20175828 GTGCTAATGCAGTCATCGG 59 20175947 20176458 TTGTGTCAGTTCTTCGATCAG 58 NA Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 3 2 2 83 3R 20199862 20199880 GTGGACACGAAATGGACAG 58 20199732 20199815 TAGGCATAGTCCCACTTCG 58 NA Nonspecific Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084702 1 1 2 120 3R 20662828 20662846 AGTCTGACCATGCTCTTCG 59 20662928 20663781 GTCCTTTAACAATTGGGACGT 58 NA Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 3 2 2 169 3R 20767855 20767939 TGCCATACGAAACAAACCC 58 20767704 20767724 CGATAAACGACTTGTACTCGC 59 NA Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 3 1 1 61 3R 21104513 21104534 CATCAGTTTAAATTGGAGGTGG 57 21104411 21104429 ACCACTACCGTAGAATGCA 58 NA DesignNoJunction Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 3 2 7 142 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573931 21574750 TGAACAGGTTCGAGCTCTG 59 NA Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978 1 1 2 80 3R 21877632 21877706 GGAGATATCACGTAATCTCGAG 57 21877573 21877591 ATGGTGGCCAGAATATTGC 58 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 3 3 3 87 3R 21884734 21884752 GACTCTGAGACGACGTCTG 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 2 4 9 162 3R 22699731 22699803 CAACAGCTACCACACTCCT 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 2 2 2 81 3R 22796475 22796493 TCCCTAAGTCGCATCATGG 59 22796534 22796615 GTAAGAAGTATCTGACACCTTCG 58 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 2 5 5 80 3R 23392252 23392335 CCTTGGCAGTATCATCAACG 59 23392191 23392211 AGTGGCAATAGGACCTTAACC 59 NA Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 2 1 1 70 3R 24109731 24109750 ATAACAACTGCTAGTTGCGT 58 24109841 24109862 GGTATATTGTCAAACCTTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 2 2 13 80 3R 24728517 24745223 GACGACTATCTAACAGCAAAGC 59 24745264 24745282 ATGGAGAATGTCTCCGGTG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 2 5 10 117 3R 24959139 24960776 ATTTGAAGCTTGGCTTCGT 58 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 3 3 4 114 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141981 25142000 CTACAGTAGATGGTGAGGGC 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 2 3 5 104 3R 25309372 25309391 AATTTGAACCTGCTGAAGCG 59 25309458 25309689 TAGAGGAGCGACATTGCTG 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 3 3 4 81 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0085565 3 1 2 80 3R 25935494 25935579 TCACATCAAAGAGTCCCGA 58 25935621 25935641 AAGAGAAGTCATCCTCCTGTG 59 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0110860 3 1 2 97 3R 26339622 26339698 AGATAAACCCGTGATTCATGAG 58 26339546 26339567 TTCTTATAGCTTCTGATGCGTC 58 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 1 4 4 116 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650760 26650778 CTGAAAGCATCTTGCTGGC 59 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 3 2 2 81 3R 27214821 27214897 ACATATGCGAAACTGCTGG 58 27214941 27214960 TAAAGTATTGCGTGTTGCCG 59 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 3 4 4 108 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230067 27230141 TCATGTTACGTCCATTGCT 57 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0113314 1 1 4 96 3R 27229895 27230065 CTTCAGTTCTGGCAGAATACC 58 27229819 27229837 TAGCGAACGGTCGATAAGG 59 NA Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 2 1 2 60 3R 27892051 27892072 TTCATCTCAAGCTCCTCTACAG 59 27887195 27887219 TGAGTGTATAATAGAAGGGAGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 3 5 6 199 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322902 322923 CCAACTGAAGAAATGATTTGCG 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300343 2 2 3 80 4 502324 502448 ACTATGCGTTCCAAACGAC 58 502262 502282 TGATCTTGTTTGGAAGAAGGC 58 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 1 4 6 106 4 640796 640895 CTCAACAGATATCCAGGTTAACAG 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340 2 1 3 145 4 756804 756973 AAATAATCAGCACGCCGAC 59 757080 757100 TTGTATCCTTTATCACGGGCT 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 3 2 5 145 4 886675 886693 CCTTGTTCGATCGGAACTG 58 886490 886566 AGGACGAGAGTTATTGCCA 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100346 3 1 8 132 4 1128963 1129116 TTCCATTGGTTCGCTTACC 58 1129746 1129766 CATTGATGTGTAGTTTCCGTC 57 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 3 4 8 80 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129789 1129807 TGTTCTTGCCCGACTAAGG 59 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 3 1 3 76 4 996159 996177 TATAAAGTAAGTGCCGGCC 57 997415 997438 CTTCGATACTGACAGTATGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 2 2 3 80 X 31080 31099 CCATATTACGCACCATTTCG 57 31142 32454 CCGAAACTAAGTTCTTGCG 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 2 8 8 86 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396250 396334 CACTCATTGTGAGCCAAGG 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 2 5 6 87 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640607 640627 TCAGTATGTGATAGCTGACCG 59 NA Drosophila melanogaster 61 futsch FBgn0259108 FBtr0112628 2 1 2 127 X 1308710 1321718 TGCTCAAGGGATTCCTCTC 58 1326777 1326795 ATACTGGATGAGCCGTTCG 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070503,FBtr0070502 2 2 2 132 X 2590879 2590958 GGATTCATTTAACCAAATGGGC 58 2590768 2590792 GTAATCTACAAATTCCTTCACCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 3 5 5 81 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016108 GTCTAGCTGTCGAGTAGTCG 59 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 1 2 2 117 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567273 5567291 ATCACAATGTAGACGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 3 4 4 75 X 6637145 6637163 TTACTCACGCGAGTCAGAC 59 6636287 6637106 GTTCTTGAAGTGCACACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300841,FBtr0100211 2 2 21 195 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6980000 6981653 CGCATAACGTGACATTCCG 59 NA InUTR Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 2 2 3 166 X 7764353 7764371 AGTTACGGAACAAGCTACG 57 7764007 7764223 TTCGGGTTTATTGTCCTGG 57 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 3 6 6 116 X 7944307 7944478 CCAAGAAAGATGAGTCCGC 58 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 1 2 2 108 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328886 8328904 ATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 3 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466338 ACCTTGTTCAGTTCATTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 3 3 3 85 X 9148003 9148021 CAGCAATCCAATGGTCTGC 59 9148070 9148161 AAGCCAGTGAGCAGATCAG 59 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0273354 1 1 2 95 X 9647339 9647592 TAACATCACAGCTAGTCGC 57 9647651 9647669 GATGACTGTGATCCAGAGG 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 2 3 3 85 X 10641029 10641047 CAACTCCGTCTACCAGGTG 59 10641096 10641527 GTGTTACCACATTGCCACC 59 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 1 4 4 80 X 10655534 10655624 CCGTATCCCGATGATATTATCTG 58 10655476 10655495 CACCTTGGACATAATGGACC 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 2 2 10 81 X 10692592 10692667 TCTCTACGAATAAGGGTGAACTC 59 10692533 10692553 CGTCCAATCAAATTGTTGTGG 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0273235 1 1 4 104 X 11567399 11567417 ATATCTGCATCCACCAGTG 57 11567485 11569372 CCTCGTCATCTTCATAGCC 57 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 2 4 4 140 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698360 11698378 GTCAACTGATTCTTGGCGG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 2 2 10 88 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848304 11856054 ATTGAGTTCGAATCGTGCC 58 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073662 3 1 3 170 X 12467838 12475614 TTCAAAGCAGAGCACATGTC 59 12467372 12467390 TACTTCGGAGCTGGTAACG 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 2 6 6 84 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545582 TATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 3 3 10 80 X 13489088 13489107 AAGTCGCCTCCAAGTATGAG 59 13488932 13489048 TATTATAGCCACCCTCGAAGAG 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0112980 3 2 5 80 X 13544086 13546917 GATACCTGTATCAAGATCGCG 58 13546959 13546977 GAGGACGCCGATATTAGGT 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073825 3 2 4 194 X 13698426 13698444 ATAGTGCGACATCATCCCA 58 13700688 13702411 AGACACGACCTTCTTGAGG 59 NA Drosophila melanogaster 61 Ste:CG33242 FBgn0053242 FBtr0300091 3 1 1 113 X 13947807 13947825 GAACTGGCAACATGTCGAG 59 13947651 13947669 ACGTATCCTGCACGTAGTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 2 1 1 89 X 14138026 14138046 CATTCAGGAGAATCTCAACGA 57 14139309 14139327 AAACAGACGATCACAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 3 2 2 80 X 15360145 15360260 CGGAAACATAAACAAACTGACG 58 15360301 15360319 TTCAGCACGATCAGATCCT 58 NA Nonspecific Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 3 4 9 119 X 15714518 15714536 CAAGTCAGTTCGCACATCC 59 15717249 15717335 ATCATAGAAATCTTGGGACGTG 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 3 4 4 87 X 15769161 15769180 CAGCTAGATTTAGGCGATGG 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 3 2 2 195 X 15837144 15837162 ATCTAAGGCCACCTCTACG 58 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 1 4 4 80 X 15975871 15975890 CCAAATGAACTTTCCGTGTG 58 15975307 15975831 GTAAAGAATCTTTACCGCTCCT 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 1 9 9 80 X 16270053 16270134 AGAGAACGAGGTGAAATGGA 58 16270177 16270195 GTGGGTAAGTCCTGGTACG 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 3 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 baz FBgn0000163 FBtr0111000 3 1 2 105 X 17086974 17086994 AATGGTATCCATCAGAACGAC 58 17087061 17087356 AATCGCCTCCACTAATCTG 57 NA Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074431 2 1 2 142 X 17317881 17320138 GTAGATGCTCCCAACTGGA 58 17320244 17320262 GTCCAGATAGACGGGTGTC 59 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 3 2 2 74 X 17520985 17521003 ATGTGTACGCCATATTCCC 57 17519648 17519666 CATCTTGGATATCACGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 2 3 4 113 X 17743836 17743951 ACTTGAACAAGTCCCTGGA 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 2 2 6 60 X 17784662 17784683 CTGTTCAACATCTATCGCAAGG 59 17784704 17790576 GACCGATGCTATATGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 3 3 7 93 X 18003567 18003585 GCGAAGAGTATTACGAGCG 58 18000954 18003511 AGATCGTTGATCTCCCAGTC 59 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 3 2 2 143 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208838 18208856 GTACACAAAGTCACCCAGC 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 1 3 4 80 X 19234581 19234602 CTTACAGTCTTCCTCAACATGG 58 19228544 19234543 ATTGAAATAAGTTCCGAGCAGC 59 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 3 2 5 111 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455728 19455747 TTGATCTGCTTGAGGAACGA 59 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 2 2 4 80 X 19470778 19470799 CCTCCCTACTTTAACATGAACG 58 19470420 19470737 GTCGTTCTTCGGAAGAGTC 58 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 3 2 4 80 X 19470777 19470798 CTCCCTACTTTAACATGAACGC 59 19470419 19470737 AGTCGTTCTTCGGAAGAGTC 59 NA Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 1 2 2 80 X 19533359 19533378 GTCCGCATATGAATCCTCAG 58 19533421 19533491 TCCACTGGTACACCTTCTC 58 NA Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 2 1 1 61 X 20052024 20052043 GGAGATCCAGAATAACTGCG 58 20051849 20051867 GATCGTCGTTCTTGTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 3 2 4 116 X 20990665 20990689 CTCTAATAATGATATCCTCCAAGCG 59 20990879 20991014 GCTTTCAGCTCCAGTTTGG 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 1 2 4 132 X 21296198 21296519 CCTATATGAAATGGAGCGTCCT 59 21295942 21295960 ATAGAGTCTGCCGTTCAGG 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 snoRNA:Me28S-C2645b FBgn0082937 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-125 FBgn0064159 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A992 FBgn0082941 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-4S FBgn0082173 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32034 FBgn0052034 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-3327c FBgn0086601 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31580 FBgn0051580 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-13b-2 FBgn0046828 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-283 FBgn0067708 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 2 2 2 80 XHet 77306 77325 GACTATATCGCATTCGAGCA 57 77365 77444 GTTCATGTAATCCTTAGATCGC 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-1192b FBgn0083000 FBtr0113565 1 1 1 60 X 17038388 17038407 TTTGGACCAGATCAAACTCC 57 17038347 17038367 GACAGTTAAGTGGTCACTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6t1 FBgn0031182 FBtr0077212 1 1 1 60 X 21389581 21389599 GGATAGCATGGAACTGGAG 57 21389539 21389557 TGCAATGATGTCCGTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 2 2 2 62 X 20066369 20066387 CATCAAGCACGAGATGTCC 58 20066243 20066343 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 2 2 2 70 X 19564760 19564840 GTCTGCCGTACATGAAGGT 59 19564874 19564892 GTACTCATTGAGGGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14200 FBgn0031023 FBtr0074721 2 1 1 126 X 19404051 19404069 CACAACACCGAGATCTGGT 59 19404159 19404248 AACTCACTTGCTCGAAGGT 59 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718,FBtr0074719 3 2 8 215 X 19398495 19398513 TGCGATTCGTTGTGTTCTC 58 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12200 FBgn0031018 FBtr0074710 2 1 1 60 X 19369438 19369456 AGATCTCCAAGTTCCAAGC 57 19369480 19369498 AACTGACGGTAGAAACCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 2 6 6 80 X 18286506 18286593 GTTCATCAAACATCACCAGGT 58 18286446 18286464 TTCAGGACATAGACACGCG 59 NA Drosophila melanogaster 61 CG6788 FBgn0030880 FBtr0074495 2 1 1 74 X 17783094 17783112 CTATCGGTTCAACTGTGCC 58 17783150 17783246 CCATTGAGCATGCTCTTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6762 FBgn0030876 FBtr0074492 1 1 1 191 X 17751676 17752096 CCATTAAGAACGAAACCAGC 57 17752248 17752268 CCATGTAGTGATACAGATCGC 58 NA Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 3 2 2 83 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492356 17492376 AGTTCTGTATTGTCATCGCCT 59 NA Drosophila melanogaster 61 CG12995 FBgn0030826 FBtr0074402 2 1 1 76 X 17103958 17103979 CTGAAACTGATGATCCTTCTGG 58 17103903 17103921 TTGGAGGACACATCATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sap30 FBgn0030788 FBtr0074331 2 1 1 60 X 16682325 16682343 CACTTCAAGGTCCAAACGA 58 16682366 16682609 TCATAATTGTATCCGCCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Muc14A FBgn0052580 FBtr0074205 2 1 1 80 X 15942639 15942661 GACACTATCAACATCTCTTCCTC 58 15942698 15943455 ATGCTTTCTTCACTCTTGACTC 58 NA Drosophila melanogaster 61 AlkB FBgn0065035 FBtr0074168 3 1 1 90 X 15753251 15753271 CGATGATTGTGTAGTCAAGGG 58 15753130 15753151 CTGTAGGCTTTCTACATTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0074102,FBtr0113440 2 2 2 127 X 15730228 15730322 TCTTAATCTATGAGGGCATGAC 57 15730410 15730428 TTTCGACAACTTGCTGAGG 58 NA InUTR Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074001 3 1 2 80 X 15187867 15187885 AATCAACAGATTCTGCGGC 58 15188372 15188390 TTTCTCGAATCGCCTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 dob FBgn0030607 FBtr0073961 2 1 1 61 X 14961655 14961673 TTCATTCCCGGACTGTCTG 59 14961927 14961946 CCATCCATATAGCGAACTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11158 FBgn0030511 FBtr0073812 1 1 1 99 X 13577136 13577154 CCATAACAACGGTGCATGG 59 13577217 13577292 CTAAAGACCGGAACATCGC 58 NA Drosophila melanogaster 61 CG12716 FBgn0030439 FBtr0073752 1 1 1 116 X 12869515 12869597 GAAACAAGTCCTGAGAATCCT 57 12869419 12869437 GAAATTGAGGCGTTGAGTG 57 NA Drosophila melanogaster 61 CG4400 FBgn0030434 FBtr0073693 2 1 1 126 X 12803067 12803086 ACTGGACAAGAAGTATCGCA 59 12802713 12802978 TTTCTCGCTCTCAAAGTGC 58 NA Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073696,FBtr0073695 3 2 2 246 X 12796461 12796479 AGTTGGTTCAGTACGAGGG 59 12795769 12795787 TCGTACAGGCTGCAATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15730 FBgn0030395 FBtr0073667 2 1 1 60 X 12390170 12390190 CAGTGATAATAGTCGTCCTCC 57 12390130 12390148 GCAGAGTTCCTTATTCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32652 FBgn0052652 FBtr0073671 1 1 1 88 X 12305612 12305687 AGCTAGGATAGTTGAAATGGTG 58 12305545 12305563 AGCGCAACATTTGTATCCA 58 NA Drosophila melanogaster 61 gd FBgn0000808 FBtr0073583 3 1 1 81 X 11881445 11881515 CCCACCACGAACTATCTGG 59 11881382 11881401 GGATCTTATACAGCACCGGT 59 NA Drosophila melanogaster 61 Upf1 FBgn0030354 FBtr0073596 2 1 1 179 X 11798998 11799077 GGTACTATAGATCTCATCGCGA 58 11798840 11798858 GTAATCGTACTGCGTGGGT 59 NA InUTR Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 3 1 2 131 X 11336741 11337617 TACAAGGTCAAAGAAGCGC 58 11337712 11337730 GGTTCATGCGTCTTTCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 C901 FBgn0021742 FBtr0073400 1 1 1 81 X 10860172 10860252 CCGATGAATGGTTATTGCCAG 59 10860111 10860129 GAATGCACTTGTCGCAGAG 59 NA Drosophila melanogaster 61 Psf3 FBgn0030196 FBtr0071465 2 1 1 93 X 10279043 10279064 CGAACTATTACTCCATCGAGGA 59 10278903 10278989 GAGTCCAGGAATCCCATCC 59 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089804 3 1 2 128 X 10135765 10136884 GTATGGAGGAGTTCAGTCGT 59 10135656 10135674 CATTCGAGATACGCAACCC 58 NA Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973 2 1 2 82 X 10047915 10047935 GGATTAGCGGACAACAATAGC 59 10047974 10048054 GGGCTTAGGATAAAGAAATCATCG 59 NA Drosophila melanogaster 61 CG15250 FBgn0030165 FBtr0071428 3 1 1 79 X 9861074 9861095 GTCACCAATATCTCAAAGTCGT 58 9860856 9860875 TTAAAGAAGAGCACGAAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9689 FBgn0030159 FBtr0071390 2 1 1 262 X 9776581 9776602 AGTGAAGCACTTAGTTAAGCAC 59 9776887 9776906 ACTACAAACACATTGACCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 c11.1 FBgn0040236 FBtr0071326 3 1 1 95 X 9175654 9176836 GATTCTGGAAGGCGTTCTC 58 9175577 9175595 AAGATCTTCACGATCGCCT 58 NA Drosophila melanogaster 61 CG42569 FBgn0260771 FBtr0301275 3 1 1 80 X 9138111 9138129 AATTCTACTTCGGTGACGC 58 9138171 9138251 CCAATGGTACATATGGATCCT 57 NA Drosophila melanogaster 61 CG12155 FBgn0029957 FBtr0071071 2 1 1 128 X 7623289 7623307 TACGCTGATCAACCTGGTG 59 7623395 7623704 GTGTACTTGTTTCCTATCTGCTG 59 NA Drosophila melanogaster 61 CG3040 FBgn0029925 FBtr0071038 1 1 1 60 X 6866568 6866587 GACGGCAATCTGTTCAACTC 59 6866527 6866546 CCATGTAGACATCGTAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070906 2 1 2 60 X 6244952 6244970 GAAACCTTGAACATGCCTG 57 6252941 6252959 CATAGGCTCCCACATTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 2 2 2 116 X 6215018 6215857 ATGTATTCGAGCAGGTCGG 59 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Cpr5C FBgn0029811 FBtr0070815 2 1 1 83 X 5698768 5698849 CATTCAAGTTTGTGGCCCT 58 5698896 5698914 GAGCAGCATGGTACAACTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4119 FBgn0028474 FBtr0070799 3 1 1 97 X 5563173 5563191 AGAAGATAGAGGCCACAGG 58 5563252 5563345 ATCATCGTAGTCTAGCGGC 59 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070792 2 1 2 194 X 5389801 5390042 GGCTTACTTGTAGTTCAGAAGAG 59 5389629 5389648 AGTACTTGAAGACGAAAGGC 58 NA InUTR Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 1 3 3 80 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309887 5309906 ATATGCGACCCAGATAGCAC 59 NA Drosophila melanogaster 61 CG3568 FBgn0029710 FBtr0070676 1 1 1 105 X 4438202 4438280 TTTGGGCGAATATGCTAATCAG 59 4438345 4438364 GCTCCGTTCATATAGTGCAC 58 NA Drosophila melanogaster 61 mei-9 FBgn0002707 FBtr0070656 3 1 1 93 X 4211062 4211080 GCAACTGGATTGCATCTGG 59 4210927 4211008 CATGGTGGAGATCATTAAGCTG 59 NA Drosophila melanogaster 61 CG32786 FBgn0052786 FBtr0070614 1 1 1 80 X 3835201 3835274 TACTGGAGTGGAAACGATGAG 59 3835313 3835334 TATGATTAGATCGTGCTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG2941 FBgn0029686 FBtr0070613 3 1 1 174 X 3830964 3831036 ACTGGAGTGGAAACGATGAG 59 3831172 3831191 CACTGGATATCATCGTGTGC 58 NA Drosophila melanogaster 61 CG3939 FBgn0040396 FBtr0070508 1 1 1 71 X 3069636 3069654 CTTCTACGGCGAGAAAGAC 58 3069689 3069982 ATGATAGTTTCCTCGGCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12498 FBgn0040356 FBtr0070489 3 1 1 60 X 2704415 2704436 ATGTCTCTAACCTGAACTTCAC 57 2704457 2704475 TTAACACAGTTATCGCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fs(1)Yb FBgn0000928 FBtr0070484 2 1 1 111 X 2614789 2614807 GAAATTTGAGCTCGCCGAG 59 2614880 2614959 TAGAGCTTGGTTGATGTACCC 59 NA Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 2 1 1 103 X 2221590 2221608 GAGGTCATGTAAGCTGCTG 58 2221846 2221864 TCACCGGTTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Vml FBgn0085362 FBtr0112535 2 1 1 60 X 2171121 2171139 TCCATCTTACTCAGCTCCT 57 2171161 2171181 CGAATAAGATGAAGATGCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 3 2 2 61 X 2146890 2146963 GAAGTCCGCAACATGATCC 59 2146847 2146865 GGCACTTCTTTGTAAAGGC 57 NA DesignRelaxed Drosophila melanogaster 61 Vinc FBgn0004397 FBtr0070420 2 1 1 118 X 2112122 2114417 GTTGCCCAACAGGTATCTC 58 2112022 2112040 TTCACGAGATTAGCCACTG 57 NA Drosophila melanogaster 61 CG4290 FBgn0025625 FBtr0070340 1 1 1 80 X 1954184 1954202 TACAGAAAGTCTACCGCGA 58 1954052 1954141 TCTCCATAACCTGGTAGAGC 58 NA Drosophila melanogaster 61 CG18091 FBgn0024368 FBtr0070242 3 1 1 124 X 1202826 1202844 CACCCACTATCCACCAAGG 59 1202720 1202738 GGGCTCTGAGCCTATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32812 FBgn0025642 FBtr0070206 1 1 1 85 X 1181960 1182040 CGATTGAGAATACTTGTAAGTCCC 59 1182084 1182102 CTGACGACTTCCTACCGAG 59 NA InUTR Drosophila melanogaster 61 CG14626 FBgn0040360 FBtr0070200 3 1 1 166 X 1081002 1081020 CCCAGCTACATTCAGGAGG 59 1081150 1081892 GTGGGACCAACATAGAGCA 59 NA Drosophila melanogaster 61 CG42259 FBgn0259144 FBtr0299571 2 1 1 197 X 940510 940528 ACTCGACGATGCTTCACTC 59 940764 940782 CATCTGGACATCGGATGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3156 FBgn0023536 FBtr0070079 1 1 1 80 X 383445 383524 TTTCTTTGGATTGACTGGCT 57 383564 383585 TCTTGTAATACCAAGGTTCCTC 57 NA Drosophila melanogaster 61 CR40596 FBgn0085753 FBtr0114203 2 1 1 60 U 10047467 10047487 TCGAATGAGATCTTGGAGGAC 59 10047507 10047527 GTTATCAACCACTGTTCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40629 FBgn0085505 FBtr0302349 1 1 1 60 U 2573119 2573138 GGATTTCCAGGAATGACCTC 58 2573160 2573179 GGACAAACATTTCTGCTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40375 FBgn0085733 FBtr0114182 3 1 1 83 U 1362092 1362185 CTTAGCCACATATTAACAGGAAGTC 59 1362033 1362054 GCCTTTGATACGCTAGTTTCAG 59 NA Drosophila melanogaster 61 Pp1-Y1 FBgn0261399 FBtr0302342 2 1 1 60 U 8550013 8550032 GTGGCTGCAATCATTAACTC 57 8550054 8550073 GCAGAGATGGACTTAGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 1 2 2 87 U 1911199 1911217 GACCGTAATCCAGAAAGCC 58 1911267 1937081 CCATGAAGCACTTTGGAGTC 59 NA Drosophila melanogaster 61 CR32009 FBgn0052009 FBtr0089180 2 1 1 112 4 48504 49546 TGCTGTTTGCTAAGGATATTCC 58 48413 48431 CTGTTGCATCGCTGTACTC 59 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111045 2 1 3 152 4 996516 997395 GGGATGTACCAAACAAGTGTG 59 997509 997527 AGGCTTTACCGTAGAAGCG 59 NA Drosophila melanogaster 61 bip2 FBgn0026262 FBtr0089110 1 1 1 83 4 483733 483754 GTTCATAGATTATCCTGGACCA 57 483118 483692 GAATCAGTAACAGGAGAATCCT 57 NA Drosophila melanogaster 61 CR31084 FBgn0051084 FBtr0085007 2 1 1 167 3R 22251201 22253693 GATGAAGATGCCACGAACAG 59 22253817 22253841 GCTGTGTAACTGTATTACTGATGAG 59 NA Drosophila melanogaster 61 5-HT7 FBgn0004573 FBtr0085746 2 1 1 90 3R 26841948 26841968 AAACGACTTCGAGAAGAAAGC 59 26797650 26797668 CTATGTGATTGTCGTCGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085702 3 1 2 111 3R 26609359 26609669 CTTCGTTCGAGAAGACCTG 58 26609744 26609762 CACTTAAACTTCCGCAGCA 58 NA Drosophila melanogaster 61 CG31019 FBgn0051019 FBtr0085665 3 1 1 81 3R 26424349 26424431 TACAACGAAGATGGCTATTACC 58 26424472 26424491 GCAGGATGTTAATGAAGCGA 58 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085692,FBtr0085694,FBtr0085693 3 4 4 80 3R 26274661 26274681 TGAACTGCACTCAAAGATACC 58 26274535 26274622 ATAAGGCGTTGCTTCTTATCAC 59 NA Drosophila melanogaster 61 CG7601 FBgn0027583 FBtr0085544 2 1 1 81 3R 25561671 25561747 CTGACCAAAGCTCTACTTCCT 59 25561610 25561630 CAAACTTTCCCTGAACAGAGC 59 NA Drosophila melanogaster 61 Dup99B FBgn0250832 FBtr0089608 3 1 1 106 3R 25541044 25541062 CCGCTATTTCTCCTCTTGG 57 25540903 25540975 CACTTCTCACGATCCTTCTG 58 NA Drosophila melanogaster 61 yemalpha FBgn0005596 FBtr0085415 3 1 1 122 3R 24947498 24947517 AAGTATGGCAACTCCTATGC 57 24947327 24947413 GATTTCGTCGTAGGCTTCC 58 NA Drosophila melanogaster 61 Apc FBgn0015589 FBtr0085351 2 1 1 152 3R 24662200 24662279 TACTGAGTCAGGCTATTGCC 59 24662067 24662085 CTGTCATCGCCGAATTCAG 59 NA Drosophila melanogaster 61 CG31051 FBgn0051051 FBtr0085296 1 1 1 81 3R 24346111 24346129 TAGCGAGGACAGACAATCC 58 24345977 24345995 CATATGTTTGGGTGCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Gp93 FBgn0039562 FBtr0085254 1 1 1 83 3R 23776244 23776262 GCAAGGTTCTCGATATGCT 57 23776308 23776660 CCAATTTGATGTTGGTGGAG 57 NA Drosophila melanogaster 61 CG5003 FBgn0039554 FBtr0085272 2 1 1 80 3R 23741264 23741340 ATCTAGAGGATCTCAGTATTGAGG 58 23741207 23741226 GCAAGGAAGGTAACTTCGAC 59 NA Drosophila melanogaster 61 tau FBgn0051057 FBtr0085197 1 1 1 80 3R 23469686 23470956 AGACATCAAGATCCAAACGC 58 23469625 23469645 GGCTTGTGCTTTACATTATCC 57 NA Drosophila melanogaster 61 CG5987 FBgn0039501 FBtr0085180 3 1 1 80 3R 23074192 23074277 AGATCACCGAGAATATCTACAGC 59 23074134 23074152 AGAGATGCGGATAGACGAC 58 NA Drosophila melanogaster 61 BM-40-SPARC FBgn0026562 FBtr0085094 3 1 1 189 3R 22696077 22697648 ATTGAGATCGCCATTCGAG 57 22695844 22695927 ATCCTTGATCTTGTTCTTCTCC 58 NA InUTR Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085059 1 1 2 146 3R 22652408 22663448 TTCTGAGCAAGTGAACCCA 59 22663557 22663576 CTATGCTCATCTCACTGCAC 58 NA InUTR Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 1 10 10 80 3R 22393078 22393208 ATTACACAGAAGGGATACTCCG 59 22393249 22393267 AAGATTTCACTGGCCTGCT 59 NA Drosophila melanogaster 61 CG34129 FBgn0083965 FBtr0110870 1 1 1 60 3R 22016404 22016423 GTTTCGACAATACGGAGGTG 59 22016363 22016384 ATAGTTACTGTAACGTTTCGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986,FBtr0089983 1 6 6 80 3R 21183220 21183303 GGATAACTACGATCCCAAAGC 58 21183160 21183180 GAGTCCGTCATATCGTAATGC 58 NA Drosophila melanogaster 61 CG11889 FBgn0039308 FBtr0100614 1 1 1 80 3R 21098641 21098716 AGATCCTTCTATGCTGCCT 57 21098760 21098778 ATCCATTGATGCCTCTTCC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Nup358 FBgn0039302 FBtr0084813 3 1 1 81 3R 21078949 21079026 ATATGTTTGGTCCTCGAAATCC 58 21079067 21079086 ATGTAAGGTGCTACCGAAGG 59 NA Drosophila melanogaster 61 to FBgn0039298 FBtr0084810 3 1 1 81 3R 21066528 21066601 GACAATGGTTAACGTCAGGG 59 21066645 21066663 GGTAACGTCCAGGTAGGTC 59 NA Drosophila melanogaster 61 fd96Ca FBgn0004897 FBtr0084770 1 1 1 60 3R 20909888 20909906 AACCAGTTCCGAGATCGAG 59 20909930 20909948 CTCTATCGTGAAGGATCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 1 3 3 61 3R 20877261 20878205 TACAATTGCCTGAGTCCGG 59 20878228 20878248 CGAAATCCCTTAAAGCTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 2 2 2 165 3R 20874295 20874313 TGGGAGTATTGGAAGCACC 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0302167,FBtr0084715 1 2 2 100 3R 20743977 20744353 GACATAGCCGCTACCTAGTG 59 20744416 20744434 TGTCCACCGTCTTGATGTC 59 NA InUTR Drosophila melanogaster 61 RabX4 FBgn0051118 FBtr0084736 1 1 1 111 3R 20653339 20653570 ATCTCTACGATAGGCATTGAC 57 20653248 20653267 TGGTCAATGTTCGGAATCTC 58 NA Drosophila melanogaster 61 CG18410 FBgn0039226 FBtr0084741 1 1 1 101 3R 20625160 20625178 TAGAGACGTTGAAGCTGCT 58 20625021 20625095 CCTTGGTCATTGTCAGGAC 58 NA Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 3 2 2 93 3R 20570003 20570514 TTTGTTGAAAGCGGAAACGT 59 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 2 2 2 80 3R 20378365 20378626 ACTATTGGTGTGAGGCTACTG 59 20378668 20378686 TCTTGGAATCGTCCGAGTC 59 NA Drosophila melanogaster 61 CG13617 FBgn0039201 FBtr0084641 3 1 1 80 3R 20343031 20343105 AAGAATCATCAAGAGCCCTC 57 20343148 20343166 CCGTGAGACATCAACTTCC 58 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 3 2 2 107 3R 20196248 20196328 TGTGTTTACACTACCAACCG 58 20196398 20196416 TTTAGCTTACACGAGTCGC 58 NA Drosophila melanogaster 61 Dis3 FBgn0039183 FBtr0084605 2 1 1 80 3R 20161163 20161182 GAAATAGCCAAGTCCCTGAG 58 20161225 20161299 GACAAGGGCTCCATTATCC 57 NA Drosophila melanogaster 61 CG13609 FBgn0039170 FBtr0084560 1 1 1 60 3R 20053499 20053517 GACTGGATCGCTGAATTGG 58 20053540 20053559 CTTGTGACTAATGCTTGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsc1 FBgn0026317 FBtr0084546 3 1 1 81 3R 19959101 19959119 ATCGATAACTTCAGGGCCC 59 19959164 19959239 TGTGCCTCAGATCCTTCAG 59 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 3 4 4 100 3R 19870979 19871169 GGAAATCAAGGTCAACTGGG 58 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 Nup98 FBgn0039120 FBtr0084460 1 1 1 80 3R 19602592 19602668 GCACATTATGAGGAGACATCG 59 19602532 19602551 GACAGGCATTTCAAACTTCG 58 NA Drosophila melanogaster 61 CG10221 FBgn0028475 FBtr0084467 1 1 1 80 3R 19582858 19582931 GACCAAATAGAAGCTCAAACC 57 19582798 19582816 CATGGCTACTCGCTTATCC 57 NA Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 1 2 2 80 3R 18881442 18881527 GATGCGAACAAAGAGATTGTG 58 18881382 18881402 GATGGAGGTGTAGATCAAAGC 58 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 1 3 3 80 3R 18878659 18878742 GGATTAAACTCCGGGAATCTG 58 18876802 18876820 CTGGATCTGAATGTCCTGC 58 NA Drosophila melanogaster 61 CG13833 FBgn0039040 FBtr0084362 3 1 1 92 3R 18859821 18859957 CATACAAGGCCAATGTAACCA 58 18859749 18859770 TATTAACCAGGACGGTAACTGG 59 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0302856,FBtr0084334 1 2 3 142 3R 18515886 18515963 ATCTGGAAGATCGTGCCTC 59 18515702 18515720 CTTCTGGCTCTGATTGCCT 59 NA Drosophila melanogaster 61 btn FBgn0014949 FBtr0084278 3 1 1 60 3R 18412162 18412180 CGAAGCGAACGATCAATGG 59 18412120 18412139 TTGGCTTGGAAGTTCTTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31233 FBgn0051233 FBtr0084127 2 1 1 108 3R 17577292 17577310 GTTTCGTATGCTAAGGCCG 59 17577380 17577460 CAGTGAATTGATTGTCGACCA 59 NA Drosophila melanogaster 61 CG5862 FBgn0038868 FBtr0084049 2 1 1 103 3R 17040884 17040903 GGATCTGATCATTCTCGTGG 58 17040969 17041045 CAGCTACCTTGGTTTCTGG 58 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 2 2 2 80 3R 16732087 16732106 GTTTCGCCAACTGTCTATGG 59 16732149 16732231 GAGTGGAGTAAGCCTTGGG 59 NA Drosophila melanogaster 61 CG31195 FBgn0051195 FBtr0302188 1 1 1 80 3R 16584810 16585104 GAATTCAAGGGTGTGGTAGC 59 16584749 16584767 CGGTTCGTAGTACCAGTCC 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 1 4 4 126 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 CG15923 FBgn0038814 FBtr0113254 1 1 1 80 3R 16438766 16439051 TATCGACCATGCTATCAAGG 57 16438705 16438723 TCTATTTCGCAGTTCAGCA 57 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487,FBtr0100457,FBtr0089484 3 5 5 80 3R 16366166 16366255 CATAATGTCAGAGATCCAGTCG 58 16366107 16366125 GATGATTGACCGGATAGGC 57 NA Drosophila melanogaster 61 CG4973 FBgn0038772 FBtr0083835 3 1 1 174 3R 15884457 15884542 TGGTAACAAAGTGCAAGCA 58 15884678 15884698 TCCTCCTCATCACTATCTGAG 57 NA Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 1 2 2 135 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865336 15865354 CTTCTTCTGGCACTTCTCG 58 NA Drosophila melanogaster 61 Nup58 FBgn0038722 FBtr0083781 2 1 1 93 3R 15471802 15471884 GGCATCAAGATTAAGGAAACCC 59 15471938 15471956 AGGAGATGGTCTTCTGCTG 58 NA Drosophila melanogaster 61 CG7333 FBgn0038715 FBtr0114553 2 1 1 81 3R 15427577 15427656 CGTGAAGTCAGTCATTATAACCC 59 15427697 15427715 GAGCTTAAAGGGCGAAGTG 58 NA Drosophila melanogaster 61 CG3517 FBgn0038706 FBtr0083770 1 1 1 60 3R 15250530 15250551 GTGGACATTATCACATATGCCT 58 15250491 15250512 TGGTATCAATGCAATAGCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083664 1 1 2 156 3R 14495275 14495293 AAGATCAGCAGTAACCGCA 59 14495407 14496870 GCAGTATAGAATAGTCGTTAGTCTG 58 NA InUTR Drosophila melanogaster 61 CG31231 FBgn0051231 FBtr0083662 3 1 1 102 3R 14492700 14492788 GCATTTGTGGATGAGAAAGTG 58 14492850 14492870 GCTTGCTCAACTGTATTATGG 57 NA Drosophila melanogaster 61 CG12333 FBgn0038617 FBtr0083655 3 1 1 63 3R 14227384 14227402 ATGGTACTGCCCACATCTG 59 14227282 14227357 GAAGAATGGCCCTTCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7669 FBgn0038607 FBtr0083576 3 1 1 172 3R 14188582 14188600 AAAGACGGTCCAGAAGGAG 59 14188736 14188809 TAGCAGTAAGTGGTTGCTG 57 NA DesignRelaxed Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 2 5 5 113 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132726 14133185 GATACAGGATGGGACTGGC 59 NA Drosophila melanogaster 61 CG14315 FBgn0038568 FBtr0083547 2 1 1 60 3R 13984916 13984938 TGGTGTCCAGTGTTATCTATCTG 59 13984958 13984976 TTCGACAGAAGGACATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12347 FBgn0038558 FBtr0083519 2 1 1 60 3R 13732418 13732436 CATGACCACCTACGTGGAG 59 13732460 13732478 TTCCACGTTGCTGAATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 3 2 2 81 3R 13557696 13557719 CTGGATTTACTCGATGCTTATGTC 59 13557759 13557845 CATCGGAAGGCAAATGCTC 59 NA Drosophila melanogaster 61 CG4053 FBgn0038482 FBtr0083416 1 1 1 60 3R 12957608 12957631 TCGAGGATCTAAGGATTATAGTGG 59 12957571 12957590 AATAAGGTCTGTCCTGGCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083397 1 1 2 112 3R 12905978 12905996 TTTGTTTGTATCGGCGTCG 59 12906071 12908397 GTTGCACGATCTCTTGTAGC 59 NA InUTR Drosophila melanogaster 61 CG10324 FBgn0038454 FBtr0083356 1 1 1 87 3R 12471797 12471815 CAAAGAGGCGTTCAACGAG 59 12471655 12471749 GTATTTGGCAGTGTTTATGCAC 58 NA Drosophila melanogaster 61 decay FBgn0028381 FBtr0083304 2 1 1 82 3R 12325532 12325550 TTCAGCCCATCACCTATGC 59 12325163 12325489 ACGGAATGAGAAGAATTTGTCG 59 NA Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 2 2 2 147 3R 12307054 12307122 GCGCATTAAATCTGAGCTG 57 12307233 12307251 CACTATGTTCAGCCGATCG 58 NA Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 2 1 1 179 3R 12303277 12304474 AGCCGGAAAGCAATATAAGGA 59 12304615 12304633 CAATCTGGCAGACCTTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Manf FBgn0027095 FBtr0083283 1 1 1 80 3R 12175454 12175474 ACTACAAACAGATCGAAACGG 58 12175513 12175620 CGAGGTAGTAACAGAATCTGTG 58 NA Drosophila melanogaster 61 SF2 FBgn0040284 FBtr0083272 3 1 1 78 3R 12166965 12166983 AAATTGGACGACTCTCGCT 59 12166623 12166641 CGTTATCACCGCTATCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG6126 FBgn0038407 FBtr0083278 2 1 1 116 3R 12028530 12028550 TGTGGATTATGTACTGGAGGA 58 12025538 12025556 GATAGCATGTGCATGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 2 2 2 113 3R 11660801 11660929 AAATCAAGTCCGACGTGGA 59 11661006 11661024 TGTACATGTCCTGCTGTCC 59 NA Drosophila melanogaster 61 alpha-Man-IIb FBgn0026616 FBtr0083179 2 1 1 140 3R 11645132 11645209 AAGTTTGACTTTCAGCCGG 58 11645313 11645331 AGGATCGTTATGGGAGTGC 59 NA Drosophila melanogaster 61 CG4520 FBgn0038355 FBtr0083167 2 1 1 80 3R 11570789 11570900 CAAGACGATACTATGTACACCC 58 11570939 11570959 GTACAGTATGTTCAGGTTGGC 59 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 2 2 2 72 3R 11183940 11183960 GGGATTCTAGAGAATCTGCAG 57 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6966 FBgn0038286 FBtr0113236 1 1 1 99 3R 10908613 10908848 TGGAGCAGACTTTGAGGTG 59 10908532 10908550 CAGGGAGAGCAGATACTGG 59 NA Drosophila melanogaster 61 dpr9 FBgn0038282 FBtr0089376 1 1 1 87 3R 10892378 10892396 CTTCTCCAAGAACGTCACC 58 10889056 10892328 AAGCAACATCGTCTTATTGC 57 NA Drosophila melanogaster 61 CG14856 FBgn0038261 FBtr0082992 1 1 1 80 3R 10625926 10626004 CGGTTGTCTTCTCGATAGTG 58 10626047 10626065 TGACGAACGGTGATATGCT 59 NA Drosophila melanogaster 61 CG14841 FBgn0038218 FBtr0082951 3 1 1 88 3R 10087943 10088033 ATAAGCGACTCGGATCCTG 59 10087873 10087891 CACCCTTCCGATGATCCTC 59 NA Drosophila melanogaster 61 Aats-met FBgn0027083 FBtr0082895 2 1 1 85 3R 10085585 10085605 CTCAGATATTTGGGAACTCGC 58 10085454 10085538 TGTCCAATGTGAGGAGCTG 59 NA Drosophila melanogaster 61 CG31327 FBgn0051327 FBtr0082904 2 1 1 60 3R 9985876 9985894 GCCAACAGGATGACAACAC 59 9985834 9985854 TCCAAGTCCAAACTAGTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 2 2 2 92 3R 9945942 9946016 ATTGAGAAGGTGGTAGCCA 58 9945868 9945886 TTTCTTGAGCACGTACAGC 58 NA Drosophila melanogaster 61 Or88a FBgn0038203 FBtr0082890 3 1 1 107 3R 9936343 9936363 TACCGGAAGTTCTATTTGCTC 57 9936429 9936506 CTGCATTATTTCAGTGAAGTGC 58 NA Drosophila melanogaster 61 Or88a FBgn0038203 FBtr0082890 1 1 1 89 3R 9936361 9936379 CTCTGGACGCAATATTGCC 59 9936429 9936506 CTGCATTATTTCAGTGAAGTGC 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273374,FBtr0082885 2 2 5 98 3R 9894250 9895163 GAATTTCAGCTTCTTCCTCCG 59 9895223 9895241 ATGATGAAGACACGAGCCA 59 NA Drosophila melanogaster 61 E5 FBgn0008646 FBtr0082880 1 1 1 218 3R 9699055 9699073 TATCCATGGTTGCTCAGCC 59 9693748 9694330 AACCTTAACCTGCGTTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 ninaB FBgn0002937 FBtr0082820 1 1 1 90 3R 9527224 9527244 CGGATAACTCGATGATTTCCA 58 9527294 9527371 GTGCAGGGATTTATTCTATGC 57 NA Drosophila melanogaster 61 CG9588 FBgn0038166 FBtr0082849 2 1 1 84 3R 9501579 9501598 TATCACGGATCTTGCTCCTG 59 9501450 9501532 ACAGAGACCAGCTCTTTCG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 3 8 8 146 3R 9487574 9487894 GCTTTGTGGAATTCGAAGAC 57 9488068 9488086 CATATCGATCGTCGTAGCG 58 NA Drosophila melanogaster 61 Rbp4 FBgn0010258 FBtr0082853 1 1 1 80 3R 9480564 9480582 TCAAGCCAGCTAAATCTCC 57 9480415 9480521 CTTAGATACCGTAGGGTGGT 58 NA Drosophila melanogaster 61 CG31347 FBgn0051347 FBtr0082664 3 1 1 60 3R 8517964 8517982 TGTGGAGTCTATTCCCGTG 58 8517922 8517941 TCTGTCGAAGTCCATTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11608 FBgn0038069 FBtr0082647 2 1 1 82 3R 8465145 8465227 ATGAACAGGACCCTCATTCC 59 8465272 8465290 AGCTGGAAGAAGTGTCTCG 59 NA Drosophila melanogaster 61 CG18530 FBgn0042207 FBtr0082644 2 1 1 81 3R 8459128 8459208 CAATGGAATAACTTCTGCCGA 58 8459251 8459269 ATACCCATCTCGTGTGACC 58 NA Drosophila melanogaster 61 CG18530 FBgn0042207 FBtr0082644 1 1 1 80 3R 8459834 8459852 GTGAGGGTGTACTGTTCGA 59 8459896 8459978 CAGAGGAATCGCACTTGTG 58 NA Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 3 1 1 75 3R 8252668 8252792 AGAGATCGTTGGAGTTCCT 57 8252831 8252849 GGAAAGTTGTTTGCGTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Scgbeta FBgn0038042 FBtr0082596 3 1 1 60 3R 8247233 8247251 TTCTCATCAACTCCACGCA 59 8247191 8247209 TCCAGAAAGATACCCGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10041 FBgn0038014 FBtr0082613 2 1 1 69 3R 8177167 8177185 AAACCGCTTGACATCTGTG 58 8176803 8177134 GAGCTCCAGAATCTCCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4848 FBgn0037998 FBtr0082624 1 1 1 73 3R 8045228 8045246 AAAGATCCAGTCGGTGGTG 59 8045117 8045135 AAAGATCTCGGTACCGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42504 FBgn0260230 FBtr0300639 1 1 1 80 3R 7857084 7857159 TGGGTCGTATTAGGAGTTGC 59 7857023 7857044 GAATGTCCACCGTATTAAACGA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Tango9 FBgn0260744 FBtr0082508 3 1 1 80 3R 7799939 7800040 CGTCGTGGAGTTATATCCGA 59 7799878 7799897 GGGCAATAGCATGCTAACAG 59 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272,FBtr0082485 1 2 2 64 3R 7797716 7797734 ATAGGTCCCAATGGAGAGC 58 7797833 7797851 CTGGCGATAGTCTTTCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 2 1 1 149 3R 7497205 7498299 AATGCCAATTATGTGCGGG 59 7498412 7498430 GTTCTCACTGAGATCCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082457 2 1 6 63 3R 7417024 7417235 CTAAAGATCCGAGAGGGCA 58 7416979 7416997 AATACTCGTTGGCTACGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG6693 FBgn0037878 FBtr0082367 2 1 1 60 3R 7046663 7046681 CCTTCATGAAGGTGGAGGA 58 7046621 7046641 CTGGCAATCATATCCTGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SdhC FBgn0037873 FBtr0082372 2 1 1 102 3R 7035451 7035527 AGGGAAATGTATGCACTCTC 57 7035368 7035387 AAACCACCTTCATCGATACC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42633 FBgn0261356 FBtr0302274 2 1 1 80 3R 6607566 6607638 TGCCTCAAGACGACTAAGAG 59 6607505 6607524 ACTTCCTTCATGAGCTTCGT 59 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 3 1 4 81 3R 6598880 6602914 TTCCTACGCAGTTACGTACC 59 6598288 6598307 CGAGTAGCTCGAGTAGATGG 59 NA Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 3 2 2 153 3R 6162872 6162954 AAAGAAAGAGCATCTTGCCAG 59 6163069 6163087 TACATCCTTCTTCAGCGCC 59 NA Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0082243,FBtr0110952 3 2 3 83 3R 6049760 6049888 CTGGAGCACTTTATAGAGGCA 59 6049697 6049715 GAATTCCGGGTAATGCAGC 59 NA Drosophila melanogaster 61 CG33784 FBgn0053784 FBtr0091785 1 1 1 80 3R 5893841 5893918 CTACGACTTGCGTACTAACC 58 5893961 5893979 GGCAAACATCTACGGTGAC 58 NA Drosophila melanogaster 61 CG11722 FBgn0037777 FBtr0082205 3 1 1 95 3R 5870914 5870932 CAAGTTCGTGGACAAGCTC 59 5870771 5870857 ACTCGCTTGATAAATCGATCC 58 NA Drosophila melanogaster 61 CG31407 FBgn0051407 FBtr0082214 2 1 1 60 3R 5848898 5848916 ACTGGGACGGGATATAGAC 57 5848856 5848874 ACCCTCGCAACTATATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582,FBtr0114583,FBtr0112577 3 5 5 60 3R 5756263 5769216 CACAATTCCCGGAAACGTC 59 5769239 5769258 ATGTTTCCAGATAGTTGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0112576,FBtr0112577 2 2 5 93 3R 5808009 5808027 GTTCCGATGCGTCTATCGA 59 5808083 5812379 GGAGTCCTTTCCCAAATGTG 58 NA Drosophila melanogaster 61 CG8534 FBgn0037761 FBtr0082143 1 1 1 82 3R 5638679 5638697 CTACGATCTCCGCAGAGTC 59 5638743 5638964 AGTGAAGACCCGCTATCAG 58 NA Drosophila melanogaster 61 Scm FBgn0003334 FBtr0082102 2 1 1 80 3R 5460305 5460324 GTGATCCAGTACATCGAGAG 57 5460183 5460263 TTTACCATCGATTTCGTGCT 58 NA Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082075 1 1 2 176 3R 5417893 5433638 AACAATTAACACCAGGCCC 58 5447319 5447340 CTCCATTGAGAATTTGTTACCG 57 NA InUTR Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 1 2 2 99 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226568 5226586 TGGTAAACCAGACGACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 3 2 2 80 3R 5158579 5158661 AAACAGCTATATGCCCTTTCG 58 5158519 5158538 GAGGTATAGCTCACCCTTCC 59 NA Drosophila melanogaster 61 RagA FBgn0037647 FBtr0082013 1 1 1 80 3R 4809261 4809342 TTATACAAAGCCTGGTCTTCC 57 4809201 4809219 TCCGAAATGTGTCACAGAG 57 NA Drosophila melanogaster 61 CG13318 FBgn0037627 FBtr0081942 2 1 1 92 3R 4597895 4597977 GAGGATATCCCACTGTTCCA 58 4597822 4597840 GACCACACTGATAGCTTCC 57 NA Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 3 2 2 98 3R 4478508 4478526 GATATCCGGCGATAGTCGT 58 4478374 4478392 CTGTAACGATTCCCAGCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 2 2 2 83 3R 4060874 4060892 GTAAGCCAATATCCGTGCG 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 3 1 1 164 3R 2904129 2904561 CTTCATTCAAGCGTGGTGG 59 2903983 2904004 TCATGTCGTTGATGTATGAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904,FBtr0081633 3 3 3 60 3R 2888308 2888327 TACACTTAGCCATCGACTCG 59 2888350 2888368 CTTCTCCAGGTCTTCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 3 3 3 159 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651400 2666963 CATTCACAGTACTCGTCCC 57 NA Drosophila melanogaster 61 lab FBgn0002522 FBtr0081696 1 1 1 89 3R 2502911 2502930 CAAAGTCGCCAAATCATTCC 58 2488697 2502859 GTAGTTTCGGTGCTTGAGG 58 NA Drosophila melanogaster 61 CG1315 FBgn0026565 FBtr0081699 3 1 1 81 3R 2468968 2469598 ACCGGATCTGAAGATCATCG 59 2468906 2468925 ATAGGCAATGAGGTCCTGTC 59 NA Drosophila melanogaster 61 glob2 FBgn0250846 FBtr0301286 3 1 1 110 3R 2434390 2434409 ATGAGTTCACAATGGTGGAG 57 2434247 2434318 CGTTCCTCGTAAGGAAACTG 58 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 3 4 4 88 3R 2211841 2211860 CAACAAGTACGACACCTGTG 59 2211910 2212066 TGTGATAGGGATGTGAGCAG 59 NA Drosophila melanogaster 61 CG17919 FBgn0037433 FBtr0081711 3 1 1 134 3R 2169964 2170264 TGTTAAAGGTCACGTACAGC 58 2170360 2170379 GATCCGTCATAATGAGCGTG 59 NA Drosophila melanogaster 61 Osi16 FBgn0051561 FBtr0078608 1 1 1 132 3R 2131298 2131375 CTCATGGCAGAAGTTGCTC 58 2131471 2131489 CGAGGGACTTGTCATCCAG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0300911,FBtr0078674,FBtr0300913,FBtr0300910,FBtr0300907,FBtr0078672 2 7 12 105 3R 1588464 1602682 GTGGAGCGGAAATACAATATCAG 59 1588297 1588315 GAACCGTTATGAACACGGC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300913,FBtr0078676 1 2 12 84 3R 1587421 1587894 GTTCATTAGCTGGAAGAGCG 59 1586953 1587375 ACATACCCAGTTATGTCCGA 58 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0100434,FBtr0078785 1 2 2 119 3R 1181652 1181730 GACGCTGATAAAGGTCGTG 58 1181813 1181831 TGGTAGTTCGCCTTCACTC 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 2 5 5 137 3R 452794 452818 GACGCTATATGGGAATAAGAAATCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 1 2 2 66 3R 214104 214189 CTTCCTAAATGAGTCCACCC 57 214218 214236 CAGCTCAAGGCTTATGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Or82a FBgn0041621 FBtr0078977 1 1 1 80 3R 83240 83333 CCATGCCAATGAAGTTTCCA 59 83373 83394 CAGTGACTAGTACGGTGTAGAG 59 NA Drosophila melanogaster 61 CG14641 FBgn0037220 FBtr0078985 2 1 1 60 3R 56886 56906 GTTGCCATCAAATCTAGTTCC 57 56846 56864 TGCATAAGTAGGCTGACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR34031 FBgn0054031 FBtr0100086 3 1 1 105 3L 23178379 23178400 GCGAACAGAAAGTATTCTTCCC 59 23178536 23178554 ACTATAGGCCTGACGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 1 3 3 142 3L 22870964 22871044 TATAAGAGCTGCACAGGAGG 59 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552,FBtr0078553 1 2 2 60 3L 22866470 22866490 ACAGGTTAAGGTCTTGTCCTC 59 22866511 22866530 CACTGCCTGTTCAAATAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 3 2 2 60 3L 22857208 22857226 CTTTCTGGTGCTGTTCGTC 59 22857248 22857268 ATGACTACATTAGGCCAAGAC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 1 2 2 80 3L 21957614 21957635 ACGAATTCGTTGAGTACTTTGG 59 21957676 21957803 GGTCGCCATTAGATTGCAC 59 NA Drosophila melanogaster 61 CG7458 FBgn0037144 FBtr0078475 3 1 1 81 3L 21948894 21948912 ATTACGTCGGAGACCTGTG 59 21948954 21949495 CACAGTATATTCCAAACTCCGT 58 NA Drosophila melanogaster 61 capaR FBgn0037100 FBtr0078379 2 1 1 80 3L 21552984 21553083 TTCATTCTGTTCACGTCAGAG 58 21552924 21552944 TTATCAGCACCCTATTTGCAG 58 NA Drosophila melanogaster 61 CG7177 FBgn0037098 FBtr0078381 3 1 1 80 3L 21545066 21545315 TGCGAGTTATTGGACAAGC 58 21545004 21545024 CTGAAGTTTCTTCAGCATGTC 57 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349 1 1 3 113 3L 21428223 21428304 TCACCGAGACTACCTAATCC 58 21428380 21428398 CCACTATGACAATGTCGCA 58 NA InUTR Drosophila melanogaster 61 Ac78C FBgn0024150 FBtr0301701 3 1 1 80 3L 21139268 21139420 CTTCAACATCCAGGGATTCG 58 21139207 21139226 ATGACGAACAGGATGTACCA 58 NA Drosophila melanogaster 61 CG5262 FBgn0036988 FBtr0078230 1 1 1 101 3L 20422688 20422708 CGTAATGTTCTATCTCTGCCT 57 20422481 20422625 GTTTGGTCACATACGACGT 58 NA Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 3 2 2 84 3L 20386314 20386386 GAACAGAGAAACCGAAGACG 59 20386249 20386267 GTCGTTCGAAATAGGTGCC 59 NA Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 1 2 2 80 3L 20312175 20312194 GCCACAGGATGTATATGGAG 57 20312236 20312311 TTGTTGAAGGGAAACTTCCA 57 NA Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 1 2 2 60 3L 19612400 19612420 AGATGATCTATGTAGGCTCGG 58 19612442 19612460 TATATGGTGTCCAGCACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035,FBtr0075036 3 2 2 60 3L 19062617 19062637 ACTACTCACAAGATTTGGCCA 59 19062373 19062596 CGCGCTTCCTCTATAAACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0075063 3 1 2 68 3L 18862715 18862733 CCTACTGTCCCTACTGCAC 59 18862825 18862843 CTATTATGGTGGCGTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34253 FBgn0085282 FBtr0112447 1 1 1 117 3L 18080050 18080232 CGCACCATTGAATCCATCTC 59 18079952 18079970 AATCCGGTAATTCTCGGCA 59 NA Drosophila melanogaster 61 MED19 FBgn0036761 FBtr0075160 2 1 1 95 3L 17838900 17838918 GTGGAAAGGAGCTTCTTCC 58 17837964 17837985 TGACATATGTGGTACGATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Edc3 FBgn0036735 FBtr0075208 2 1 1 80 3L 17520514 17520594 ACTCAGTAGACGCCTTACC 58 17520452 17520470 ATTTCCTGATCGCATCCGA 59 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 3 2 2 89 3L 17363245 17363327 TCACAGAGAATGCTGTTACTG 58 17363176 17363194 AAGTAATGGTTCCGGATGG 57 NA Drosophila melanogaster 61 sina FBgn0003410 FBtr0075333 3 1 2 164 3L 16849046 16849064 AGTGGGCACAATAGTTTGG 58 16849504 16849522 GACATTGGAAGGGTTCTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pros26 FBgn0002284 FBtr0075360 3 1 1 75 3L 16603349 16603368 GAAGCATCCTGATTTCTCGC 59 16603218 16603236 TACGGCAAAGTCATCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4933 FBgn0036615 FBtr0075381 1 1 1 80 3L 16346006 16346084 CTCAAATGAGGTCCTTATAGTTGG 59 16346122 16346141 CGTTCCTCGCACATAATACG 59 NA Drosophila melanogaster 61 CG33060 FBgn0053060 FBtr0075374 2 1 1 88 3L 16324151 16324169 CTTAGAATCGCCCACTGGT 59 16324221 16324559 TCTTATTCGGACTGTGGCC 59 NA Drosophila melanogaster 61 CG13065 FBgn0036590 FBtr0075468 3 1 1 170 3L 16270545 16270563 TTTGTGTTCTTGCCACGAG 59 16270766 16270784 GTGTCCATAGGAGATGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32154 FBgn0052154 FBtr0075460 3 1 1 171 3L 16231023 16231643 GTGGTTCCCATTTGGATCG 58 16231777 16231796 CCAATTGGTAGATGAGCTCG 58 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075499 2 1 3 105 3L 16033154 16043565 TGTCTCTGTTTCGACTTCAG 57 16033068 16033086 ATCAGCTACAACAGATGCC 57 NA InUTR Drosophila melanogaster 61 FucTA FBgn0036485 FBtr0075641 3 1 1 80 3L 15145214 15145234 TATCTGGAGTGTCCGTATCAC 58 15145276 15145479 ACTATCCCGTCTGTAGGTG 57 NA Drosophila melanogaster 61 CG6859 FBgn0036484 FBtr0075640 3 1 1 221 3L 15137558 15137576 CTAGATCCGATCCAAAGGC 57 15137894 15137912 GTGACAAGAAGTCCTGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654,FBtr0075653 2 2 2 128 3L 15121346 15121469 TAGCTCCACTTGCAGATCC 59 15121236 15121256 CCATTAAACGGAGGTATTCGC 59 NA Drosophila melanogaster 61 CG6945 FBgn0036476 FBtr0075657 1 1 1 120 3L 15086420 15087361 AAGGTCTTCGTTCGGATCC 59 15086318 15086339 TTAAGACTGGCCATATTTCTGC 58 NA InUTR Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 2 2 2 86 3L 15009706 15009932 CCATCGAGATCTATGTGGTG 57 15009639 15009657 ATCCAGTTCCACTTTCCTG 57 NA Drosophila melanogaster 61 shd FBgn0003388 FBtr0075676 2 1 1 80 3L 14612757 14612777 GGGCACTAAGTGGATATTCCT 59 14612815 14613027 CTGTTCAAATCCGCATATACCTC 59 NA Drosophila melanogaster 61 CG14110 FBgn0036352 FBtr0075844 1 1 1 102 3L 13377967 13378037 GAGTGCAGTTGTTCTCACC 58 13378103 13378121 TTTACGGGAACGAGACTCC 59 NA Drosophila melanogaster 61 CG32119 FBgn0052119 FBtr0075867 3 1 1 181 3L 13241227 13241247 GCAGGAATCCGAATTTAAGGA 58 13241012 13241030 CTGGAAGACAGTTGTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10754 FBgn0036314 FBtr0075944 3 1 1 61 3L 12806876 12806894 CGATCTGAACAAGGATCCG 58 12806833 12806851 AGAGTTTGCACTCGTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yps FBgn0022959 FBtr0076027 2 1 1 219 3L 12116128 12116147 TATTATCTGCGTCAGCCGAG 59 12115865 12115947 GGCCTTGAATGTATTCTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42630 FBgn0261353 FBtr0302271 1 1 1 109 3L 11702429 11702448 CAAGAAGGTGTCTTCCTAGC 58 11702520 11702601 CATCCTGTTGTGCAACGAC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Sgs7 FBgn0003377 FBtr0076095 3 1 1 173 3L 11503016 11503100 CATCATCGCTTGCATCCTG 59 11503237 11503255 CATTTCCGGATCTTCTGCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG6140 FBgn0036162 FBtr0076177 3 1 1 73 3L 11458283 11458301 TAAACTTTCGCATTGGCGG 59 11458156 11458175 CTTCTTCAGTATGCCCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7551 FBgn0036161 FBtr0076176 2 1 1 60 3L 11451932 11451953 CATCATTATCGACAACTGTCCA 58 11451973 11451992 GAGTATCACGGATGAGAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 3 2 2 160 3L 10877957 10877978 GCGTGCAGTAACTTTATATCGT 59 10877744 10877837 TTCATGTTGTCCCAGGACTC 59 NA Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 1 1 1 73 3L 10872398 10872470 GACTTTGTTGGCTTCGGTG 59 10872503 10872525 TGAAACCTAGTATAGAGCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34238 FBgn0085267 FBtr0112432 2 1 1 91 3L 10619700 10619719 GGCCTATGCTATAGGATGCT 58 10619772 10619858 TTAGCCAACTTAGGTGTTCG 58 NA Drosophila melanogaster 61 CG6527 FBgn0036085 FBtr0076291 1 1 1 80 3L 10551840 10551920 ACAGTGACCTACAAGGTGC 59 10551778 10551797 CTCATTGGGACTGAGGACTC 59 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 1 3 3 97 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 CG32038 FBgn0052038 FBtr0076462 3 1 1 100 3L 9445257 9445402 GCGGATAACGATACACGTC 58 9445466 9445484 TTGTTGGGCCAATCAATCC 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 3 5 5 126 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100465 9100727 GTGGGTACATTCATTGGCAC 59 NA Drosophila melanogaster 61 CG6765 FBgn0035903 FBtr0076621 3 1 1 132 3L 8510052 8510070 CACGGAGAGGAATCTCCTG 59 8510164 8510317 CATATTGTTCTCCTGTTGCGA 58 NA Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 2 2 2 60 3L 8399640 8399661 ACTTAGTGGCTTATGTGAACAG 58 8399682 8399700 CGGAAATCCTCCAGAACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7213 FBgn0035861 FBtr0076718 3 1 1 90 3L 8232698 8232716 AAGTTGGCCTTTGTCATGG 58 8232505 8232646 GGTGGAACATGGTTGTAATGG 59 NA Drosophila melanogaster 61 CG32364 FBgn0052364 FBtr0076720 2 1 1 116 3L 8203500 8203520 GGGTGAAGTTTACATTATGCG 57 8203349 8203423 ATTGGCAGATATTGCATTGC 57 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 1 2 2 80 3L 8082712 8082789 GTAATACGACTACTAGCTTGCC 58 8082653 8082672 AACTCTTGATGCCAATGTCG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817,FBtr0076772,FBtr0076773,FBtr0076774,FBtr0076771 1 5 5 80 3L 7889948 7890028 GCTGCACGAATATAAATGAGGT 59 7889889 7889908 GCATCTCGGATTGTGTTGAC 59 NA Drosophila melanogaster 61 CG8560 FBgn0035781 FBtr0076868 3 1 1 80 3L 7396980 7397001 GTTGAAACTATTTGCTGTGGTG 58 7396704 7396941 TCGTAGATCTTGTAGCCATCG 59 NA Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 3 2 2 150 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328865 7328884 CTAGCGATCTCTTGACCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0076940 3 1 2 107 3L 6944446 6944464 GACGATCCAATAACACCGG 58 6944293 6944375 GATTGATGGTCTGGTTGGC 58 NA Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 1 2 2 119 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750444 6750462 TTGGCAATCGCATCTTGTC 59 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 1 4 4 80 3L 6683421 6683501 CTTCTTTGGATTAGGCAAAGG 57 6683361 6683379 GACCAGAACTCCAGTTTCG 58 NA Drosophila melanogaster 61 Lcp65Ag3 FBgn0086611 FBtr0077061 2 1 1 60 3L 6123845 6123926 AAAGCTTCAAATACGACTGGG 59 6123805 6123823 AGCTGACCTACAGCTTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 3 1 1 138 3L 6027564 6027582 AATGGAAACAAGGCAGCTG 59 6027392 6027462 CTCCTTTGGTGCAATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 3 1 1 62 3L 5898733 5898832 TTGGTGCTCGAGTATGTGG 59 5898689 5898708 CAAGGCCAGTGATAGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5592 FBgn0035645 FBtr0077029 2 1 1 168 3L 5891643 5891720 GTCACCAAGTTGGCTTATGTC 59 5891850 5891868 ACTGGTGTACTGCTTTCCC 59 NA Drosophila melanogaster 61 mad2 FBgn0035640 FBtr0077113 3 1 1 80 3L 5805866 5805886 GGCTAACCATTCTAATGTCCA 57 5805745 5805825 AGAGCCATTCTTCAGTTTGG 58 NA Drosophila melanogaster 61 CG13712 FBgn0035570 FBtr0073364 1 1 1 60 3L 4709568 4709588 ACAGATTGCGAACCAATATGC 59 4709528 4709547 TACTTTCGCTTGCGTTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 2 1 1 84 3L 4471710 4471839 GCCGGTCTAAGATATTATTCGA 57 4471883 4471902 TGTAGTTGTAGCCAGATTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15021 FBgn0035544 FBtr0073301 3 1 1 119 3L 4436878 4436951 ATCGAGTAGAAATGCGCTG 58 4437033 4437052 GCTGCTTGTAATGATAGCCA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15021 FBgn0035544 FBtr0073301 2 1 1 92 3L 4436877 4436951 CATCGAGTAGAAATGCGCTG 59 4437006 4437024 GAGATCTGTGTCCAGGTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 3 3 3 100 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224840 4224935 GTCTTCCTCATTAAGTACGGG 58 NA Drosophila melanogaster 61 Cpr64Ad FBgn0035513 FBtr0073223 3 1 1 180 3L 4215464 4215557 GGTTGTTGCAGTCCTTTCC 59 4215701 4215719 GTTGTATCCCAAAGGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr64Ab FBgn0035511 FBtr0073253 1 1 1 131 3L 4211335 4211465 TGATCAAGATCACCCTCATCTG 59 4211225 4211243 TATAGGCGAACGCGTACTG 59 NA Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 2 1 1 77 3L 4089198 4090040 TGTAAAGAGCTCTGCGGAG 59 4090081 4090099 CTCCGGTCTCAGGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 scrt FBgn0004880 FBtr0073165 1 1 1 80 3L 3985477 3986530 CAATGTTTACAACGGCTACAC 58 3986572 3986590 GTTATCTCGCTCTCCATGC 58 NA Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073177 1 1 3 60 3L 3903010 3903029 CCAATCCTAACAAGCCTTGG 59 3901736 3901757 CAAAGTCTTCACAAAGATCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Scsalpha FBgn0004888 FBtr0073151 3 1 1 107 3L 3817713 3817793 TACAATTCGGGCATCAAGG 57 3817863 3817882 CTTTCCTCCGGAAATGATGG 58 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 2 2 2 80 3L 3812401 3812479 TTGTGCTCATTGGTTTACTCG 59 3812520 3812539 ACGGAGTCACTATCAACTGG 59 NA Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 1 2 2 82 3L 3463217 3463235 AGACAGACTTGCCTACAGG 58 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 CG33160 FBgn0053160 FBtr0073102 2 1 1 60 3L 3206234 3206252 CATGTGTCCAGCATCAAGG 58 3206192 3206210 ATAGCTCCTCTGATGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14958 FBgn0035413 FBtr0073039 1 1 1 146 3L 3190006 3190129 CTCGGTTTGATTGCCTTGG 59 3190237 3190257 GAAGGTTTGGTTGGTATTCGG 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776,FBtr0301580,FBtr0072975 2 4 4 162 3L 2925329 2925347 CAAGGAGAACGTTCACGAG 58 2925473 2940795 TATCACTGCGATAACCCGG 59 NA Drosophila melanogaster 61 CG42303 FBgn0259199 FBtr0299683 3 1 1 63 3L 2653600 2653618 CACAATCACCTTGTCCCTG 58 2653644 2653723 ATATTTCTGCGAGGACTCTG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG13800 FBgn0035338 FBtr0072891 1 1 1 80 3L 2388772 2402566 TCTCATACAGACTGTTCAAACC 58 2402606 2402625 CTATTCCGGTCATTGGTCAG 58 NA Drosophila melanogaster 61 CG15877 FBgn0035337 FBtr0072899 2 1 1 60 3L 2377299 2377320 GTCTAATTCTAGCTCCACAGGT 59 2377205 2377278 CTCTTGGCGGGTTTATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13807 FBgn0035323 FBtr0072878 2 1 1 135 3L 2263185 2263203 TCATCCCTACCACAATCGC 59 2263363 2263381 ATCGTATCTGTTGTTGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15878 FBgn0035316 FBtr0072911 2 1 1 60 3L 2211709 2211727 ACATGATCGGATGCTTCAC 58 2211667 2211688 TTCATCAACCAGAAAGTCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5707 FBgn0026593 FBtr0072912 2 1 1 219 3L 2191940 2191958 CATCGAGACGCATGAACAG 59 2190210 2190228 CAGCTTCGAGGAGTATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 LysP FBgn0004429 FBtr0072633 1 1 1 60 3L 1218649 1218668 TGTGATTTGTGCTCTGACTC 58 1218608 1218626 ACACCTATCCATCGTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13884 FBgn0035138 FBtr0072568 2 1 1 70 3L 365963 365981 AAAGGCTTTGATCTACGCC 58 365911 365929 AGTGGAGCATCTGTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 1 2 2 83 3L 326089 326107 TCTCATCCCAAGATTCGGA 57 325966 326044 GCGTATATTCTTGTTCTTGGC 57 NA Drosophila melanogaster 61 ttm2 FBgn0035124 FBtr0072507 3 1 1 60 3L 276333 276351 CGACAATGACACTACCCTC 57 276374 276393 CTCACTCGTTCCTAGAACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1180 FBgn0086658 FBtr0091640 2 1 1 62 2R 7478957 7478975 AATGTCTTGTCTATCGCGC 58 7478913 7478934 GCAAGTTACTAAATGCTCTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33366 FBgn0053366 FBtr0086358 1 1 1 60 2R 15648942 15648960 ATACATCGGTTCTCGTCCG 59 15648900 15648919 TATAAGTACTAACCGCGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr016:2R FBgn0062961 FBtr0091953 2 1 1 138 2R 14598983 14599060 GACTGCTGATTGCTTAACGG 59 14599156 14599179 GAATTACTTAGGATACAGAAGCCC 58 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 2 3 3 102 2R 20920193 20924124 GCTCAATGCCGCTATTCAG 59 20924184 20924208 CATCAGTTGATTTATAAGGGACTCC 59 NA Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072392 1 1 2 73 2R 20826297 20826315 ATGGAAGGAGTTCGAGGAG 58 20826352 20826483 AAGAGATGGTGCTCAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ance-5 FBgn0035076 FBtr0072420 2 1 1 143 2R 20776460 20776478 TGTCATGGAGATAGCCACC 58 20776275 20776355 CTTCGACACAATTCATCTGCA 59 NA Drosophila melanogaster 61 egg FBgn0086908 FBtr0112777 3 1 1 80 2R 20664215 20664235 GAGGGTGTTCATCTGAATCTG 58 20664084 20664173 GCACTTTGACTTGTCCGAG 59 NA Drosophila melanogaster 61 CG3565 FBgn0035034 FBtr0072316 3 1 1 89 2R 20490356 20490374 ACACTTGGAGTCCTTTGTG 57 20490426 20490502 TTATCGTAGACCGAGAATGC 57 NA Drosophila melanogaster 61 CG3565 FBgn0035034 FBtr0072316 1 1 1 86 2R 20490357 20490375 CACTTGGAGTCCTTTGTGC 59 20490425 20490500 ATCGTAGACCGAGAATGCG 59 NA Drosophila melanogaster 61 CG3105 FBgn0034950 FBtr0072160 2 1 1 81 2R 19879126 19879204 GCGTTAATGAAGCCAAGCA 59 19879249 19879267 TCGTGGTTACTCACTGAGG 58 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 2 1 3 69 2R 19858114 19858191 TTGACATACCGGATAGGGC 59 19858222 19858242 GCGTGTTTGGTATTACTTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 or FBgn0003008 FBtr0072152 3 1 1 84 2R 19856024 19856100 CCTCTCAGAACTGGTAATGG 57 19856147 19856165 GATCTTGTTCTGCTCCTCG 58 NA Drosophila melanogaster 61 eIF6 FBgn0034915 FBtr0072235 1 1 1 60 2R 19737299 19737320 GAAGATTTATCGTGTGGAGGAG 58 19737260 19737278 ATCATTGCAGGCGATAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shu FBgn0003401 FBtr0072237 1 1 1 157 2R 19730592 19730667 GTCCTATTCGGATCTCGTG 57 19730453 19730471 AATATGTCCACGGTGAACG 58 NA Drosophila melanogaster 61 Or59b FBgn0034865 FBtr0072021 3 1 1 118 2R 19358402 19358481 CCACAAGACTATACTGAAATGC 57 19358305 19358323 AGAAGAACACGTTCACCAG 57 NA Drosophila melanogaster 61 Klp59D FBgn0034827 FBtr0071968 1 1 1 60 2R 19031668 19031689 GAATCTAGAGACTTACGCTCAC 58 19031708 19031728 CTGCTCTATTTCCTTATCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 1 2 2 215 2R 18935221 18935363 GCCACAAGATACATTGACTTCC 59 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9897 FBgn0034807 FBtr0071989 2 1 1 80 2R 18873476 18873496 ACACCACCGATGAAATAAAGC 59 18873361 18873434 CGCTGCTAATCCTATTGGC 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302775,FBtr0302769,FBtr0302774,FBtr0302771,FBtr0302768,FBtr0302772,FBtr0302770 3 8 13 81 2R 18817587 18817727 GCGATTTCAACTACAACATTCG 59 18817769 18817787 CGACTGAGACCACTCACAG 59 NA Drosophila melanogaster 61 CG30273 FBgn0050273 FBtr0071866 3 1 1 147 2R 18554818 18554895 GGTGATCATACAACATCAAGCT 58 18555003 18555021 AACGATGCATAGAATGGCG 58 NA Drosophila melanogaster 61 CG3732 FBgn0034750 FBtr0071936 1 1 1 285 2R 18527350 18527445 CAGATTACGACTGTCGCCA 59 18527083 18527101 ATATTGCAGGTTTGGCGAC 58 NA DesignRelaxed Drosophila melanogaster 61 mRpS29 FBgn0034727 FBtr0071842 2 1 1 60 2R 18306753 18306772 TACACGGACAAGGAATTCCA 59 18306712 18306730 TGTTGATCCAGTGTCGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 1 4 4 172 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 3 2 2 81 2R 18075288 18075364 TGAACATGAACAACATCTCCC 58 18075404 18075425 TTGTAGAAGTCGATACAGATGC 58 NA Drosophila melanogaster 61 CG34205 FBgn0085234 FBtr0112398 1 1 1 80 2R 18018468 18018654 CTAGCATGAAACTTCTGATCCT 58 18018409 18018428 CCGAGTGTCCATAATCAAGG 58 NA Drosophila melanogaster 61 CG9143 FBgn0034496 FBtr0086304 2 1 1 114 2R 16164986 16165007 CTACTCAAGGTTCTCAATTCGG 58 16164835 16164911 CATTTCGCTTCTGCATGTG 58 NA Drosophila melanogaster 61 Tab2 FBgn0086358 FBtr0086516 1 1 1 82 2R 15190310 15190332 GGAATCTGAAAGACTGGATAGAG 58 15190374 15190455 CCTGCGGTTCATTTAAGCA 58 NA Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086700,FBtr0086701 1 2 2 60 2R 14426502 14426521 TGAAGGAGATCTTCTCGCTG 59 14426543 14426562 GTGCGAATATCCTTGACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18538 FBgn0034324 FBtr0086760 1 1 1 111 2R 14184844 14184917 GAAACCATGGTACGTCGAG 58 14184990 14185010 GTTCAGATGTTCGTATAGCGA 58 NA Drosophila melanogaster 61 CG5770 FBgn0034291 FBtr0086812 3 1 1 108 2R 13932205 13932224 GAAGACCTATCAGTCCGACG 59 13932053 13932134 ATTATCAGCAGCATTCGCG 59 NA Drosophila melanogaster 61 dpr13 FBgn0034286 FBtr0300215 1 1 1 80 2R 13865172 13865193 TCTTCTGGTATCACGATAACCG 59 13865040 13865131 ATTGAAAGTCCGGTTCCGT 59 NA Drosophila melanogaster 61 CG18631 FBgn0034239 FBtr0086944 2 1 1 80 2R 13430864 13430943 TCTGGAATCGAGCCTTTCAG 59 13430986 13431004 ATCGTCCTCTGGAGAAGGT 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 3 2 3 80 2R 12984774 12984795 CTTATTAGCGAATTGAAGACCC 57 12982548 12984735 CTTTCTCAATGCAATTCCCTC 57 NA InUTR Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 3 9 9 119 2R 12955113 12955134 GATTCAGATGAGTTAAGCAGTC 57 12954944 12955033 ATAAGGTGAGTTGCTGCTG 57 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0112819,FBtr0087048 3 3 3 80 2R 12829847 12829868 CGCCATAACTGATCATAATGTG 57 12829909 12829990 TTAGTTAGGAAGCCCTTGC 57 NA Drosophila melanogaster 61 CG5348 FBgn0034156 FBtr0087022 1 1 1 85 2R 12654676 12654757 CAATGTTTACTATAGTCCTGCTCTG 59 12654800 12654818 ATGCCATCAGGGTAACTCC 59 NA Drosophila melanogaster 61 CG10731 FBgn0034081 FBtr0100497 3 1 1 109 2R 12036519 12036537 ATGGGCCTAACTCTGAAGC 59 12036303 12036446 AATTGTGCAAGCCTTAGCT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 2 2 2 94 2R 11743552 11743576 CTATAACGCCTTAAAGGATAAGGTG 59 11743627 11743963 CATATCCACCGCAAAGTGTG 59 NA Drosophila melanogaster 61 CG30471 FBgn0050471 FBtr0087333 1 1 1 134 2R 11423918 11424004 TCTTCTTTACCATCAGTGGCT 59 11424100 11424118 TCAGGTAGCGATGGAACAG 59 NA Drosophila melanogaster 61 Mtk FBgn0014865 FBtr0087386 3 1 1 76 2R 11296437 11296455 TACATCAGTGCTGGCAGAG 59 11296495 11296513 GGTTAGGATTGAAGGGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 3 3 3 81 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204763 11204782 CTCGTATTCCTGAGTTTGCC 58 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 3 2 2 95 2R 10720450 10720684 ATCGGCTAATGCTCTTCTG 57 10720743 10720761 TGCTGATCACATCCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG34443 FBgn0085472 FBtr0112747 2 1 1 105 2R 10255548 10255567 AGTTACTTTCTTGGCCTGGT 59 10255635 10255710 CAATAGCGGCGAAGATACC 58 NA Drosophila melanogaster 61 CG42288 FBgn0259184 FBtr0299668 3 1 1 204 2R 9978870 9978961 GAGTGCACAATAACAACGAG 57 9979191 9979210 TCATCTTCGTAGGCGAAGAG 59 NA DesignRelaxed Drosophila melanogaster 61 tum FBgn0086356 FBtr0087641 3 1 1 88 2R 9744840 9744927 AGTGTCAGAAACGCATACG 58 9744770 9744788 GAGCAGATACCGACAATCG 58 NA Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670 1 1 2 176 2R 9395070 9395088 ACATTTCAGGGTTTACGCA 57 9395284 9395302 CAATGACATGGATGCGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 cid FBgn0040477 FBtr0087667 1 1 1 60 2R 9373630 9373648 CACACTGATACCCAAGCTG 58 9373670 9373690 GCTGTACTTCACGATGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cbs FBgn0086757 FBtr0087666 3 1 1 110 2R 9339280 9339298 GAAAGGCCCTTAAATCCCG 58 9339372 9339442 GCAGCTTGACCTTATCGTC 58 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0301395,FBtr0087703 1 6 6 94 2R 9332335 9332353 CATCACGAGGAATTGCAGC 59 9332189 9332277 GACTCCGCCATCTGATAGG 59 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 1 3 3 80 2R 9057272 9057290 ACGAAAGCATCTCCTTTGG 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 CG15870 FBgn0033798 FBtr0300670 1 1 1 87 2R 9051122 9051140 AGGATATGGCGGATATGGC 59 9051053 9051071 ATAGGGTACGGGAAGAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or49b FBgn0028963 FBtr0087781 1 1 1 80 2R 8731007 8731025 GGCAATCTGTTCTTTGGCA 59 8731069 8731191 AAATGGCAGGACTCTTTCG 58 NA Drosophila melanogaster 61 Obp49a FBgn0050052 FBtr0087872 1 1 1 69 2R 8578151 8578171 GAAGCAAGTGGATCCTTTGAG 59 8578041 8578120 AGGAGAAGAAGCATGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 2 1 1 60 2R 8282021 8282096 TGAGTACAAATTTAGCCAAGGC 59 8282114 8282135 TATCGCAAAGATCCTTCATACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13167 FBgn0033706 FBtr0088000 3 1 1 87 2R 8145373 8145467 CTGGAGCATGTGGTAATACC 58 8145517 8145535 GATAGAAATCCTCGCGCTC 58 NA Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082 1 1 2 122 2R 7578239 7578325 CAGCGAAGCTCCAATAACC 59 7578044 7578062 CTCATTGTTGTGCTCAGCC 59 NA InUTR Drosophila melanogaster 61 CG34228 FBgn0085257 FBtr0112421 3 1 1 101 2R 7539486 7539504 GTTTACATCACGTTGCCCA 58 7539566 7539655 TTGTATGGATGGACTGTATGGG 59 NA Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088129 3 1 2 147 2R 7255895 7256060 GCGATAAGTTTAGGCCTCG 58 7256170 7256189 GAAGGGCTTTAGGAAATCCA 57 NA InUTR Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299853 2 1 4 79 2R 7184806 7184824 CAATCCATTCCCGACTTCG 58 7182269 7182288 TACAGCTTGTAGCCAAAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0088211,FBtr0300862 2 2 2 65 2R 6828023 6828041 AATTTGGGTGCGAAGTAGC 58 6827908 6827928 GATCGGGATTCTTCTTAAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG6751 FBgn0033562 FBtr0088228 2 1 1 60 2R 6763977 6763995 CGAGCCCACATTTAAGCTG 59 6764017 6764037 TCCATACTGCTCTTTGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6751 FBgn0033562 FBtr0088228 1 1 1 60 2R 6764301 6764320 GAAAGTTGACGGTGAAGTGG 59 6764342 6764361 GATGAAGTAGTCGGTCTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11777 FBgn0033527 FBtr0088273 3 1 1 90 2R 6356362 6356380 GGAGATCCTACGAACACCG 59 6356431 6356715 GATCAGTGTGCTTAATGGTCTC 59 NA Drosophila melanogaster 61 CG12896 FBgn0033521 FBtr0088315 3 1 1 183 2R 6314730 6314812 AACGTTGACGAGATTCTGAG 58 6314503 6314521 TTACTCCAGATGGCATGGA 58 NA Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 1 1 1 103 2R 5733917 5733936 GCACGACTGGAATTTCAGTC 59 5733777 5733851 TCTCTAGCACGTTTGGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8078 FBgn0033375 FBtr0088631 3 1 1 177 2R 4985781 4985799 AGGCAGAGATCCATCACAC 59 4985570 4985589 GTGATGCCTTCGTCTATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 2 2 2 83 2R 4351580 4351659 AACTGGGTGTTGGGTAACC 59 4351704 4351724 AGTGAGCATGTTTAGCATGTC 59 NA Drosophila melanogaster 61 CG14755 FBgn0033282 FBtr0088738 1 1 1 70 2R 4235802 4235820 GAGTCGAACAGCATTGCTG 59 4235854 4235872 TTTGACCACTATCGCTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140,FBtr0300954 3 2 2 80 2R 4006966 4007063 CTCAGGAAACACCCATGTG 58 4006904 4006922 TCCTGCTCAATAACCTTGC 57 NA Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 2 1 1 70 2R 3836025 3841426 AGCAGTTTAAAGAGTTCCAGG 58 3835975 3835994 CTTTGGGTCTATTTCGAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 2 2 2 84 2R 3721688 3721706 AGTGTGGAGTACCATGTGG 59 3721751 3721829 AAAGACTTCCATCTGATCTGTG 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088937 2 1 3 121 2R 3609629 3609647 TGCTAGAAGGCATGACGTC 59 3607489 3609544 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779,FBtr0088939 2 3 5 81 2R 3572525 3572546 TGTGATAACGAATAGCAATCCC 58 3571792 3572486 CAAATGAATGGCACCTTTATCC 58 NA Drosophila melanogaster 61 Gr43b FBgn0033202 FBtr0088945 2 1 1 99 2R 3547079 3547097 CAGCAACTGTTCGTAATCG 57 3546928 3547016 TTATCAACGAGGTGTGCTC 57 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 3 2 3 67 2R 3330822 3330840 ATTATCGAGTCCCACGGAG 58 3330871 3330956 CACTTGAGGATGGGAAACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 1 2 3 80 2R 2880548 2880631 AACGCTCCAAGTGTTATCC 57 2880672 2880693 GCTCCAGGAAGTTACATAAGTC 58 NA InUTR Drosophila melanogaster 61 CG30157 FBgn0050157 FBtr0086186 1 1 1 121 2R 2861883 2861901 GAAGTACCAAGGCTTCGTC 58 2861718 2861798 CTACGAAATGCGGATCCAC 58 NA Drosophila melanogaster 61 CR33319 FBgn0053319 FBtr0089858 2 1 1 217 2L 20929028 20929156 GTCCACAGATCTGTCAACGA 59 20929330 20929354 CACATAGTCGAGTCTATAAAGACCA 60 NA DesignRelaxed Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 3 2 2 80 2L 22842664 22842684 AGGACATATTACATTGCCGGA 59 22842549 22842625 CGAACACAAATGGAATGTTCTG 58 NA Nonspecific Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 1 3 3 80 2L 22818639 22820176 ATTGTGGATCCAATCTCGAC 57 22820218 22820237 AACAACCAATTGCTTTGCAG 58 NA Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085907 2 1 2 86 2L 21832187 21833384 AATTATAAAGCTCTGCCCACAG 58 21833431 21833449 GGAGTTTGAGTCGTGTGAC 58 NA InUTR Drosophila melanogaster 61 CG8678 FBgn0032935 FBtr0081487 2 1 1 99 2L 21213159 21213233 TGCAATGTCTGATTCTGCC 58 21213078 21213096 GGTAATTGCCACTGGAGGA 59 NA Drosophila melanogaster 61 CG10949 FBgn0032858 FBtr0081367 3 1 1 81 2L 20416212 20416231 AGTCTCCAAGAACCTAGCAG 58 20416093 20416168 GTAGCAAAGTTCCTCCGAC 58 NA Drosophila melanogaster 61 CG16772 FBgn0032835 FBtr0081302 2 1 1 89 2L 19962743 19962832 CTAATTAGCCAGCTGCTGG 58 19962885 19962903 CTCTTCGCTGTAAAGCGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 1 2 2 90 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542981 19543631 CTTTATCAGCGTCGATCCAG 58 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 2 4 4 80 2L 19391955 19392075 TCAACTGCATCAATATCGCA 58 19391894 19391912 GTGCTTGTCAGCTCTTCAG 58 NA Drosophila melanogaster 61 CG13086 FBgn0032770 FBtr0081197 2 1 1 88 2L 19364540 19364558 CTACTTCGTTGCTGACGAG 58 19365015 19365034 TATCCAGGCAAACTCGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 3 2 2 80 2L 19186184 19186264 GCTATAAAGAGAAGGCAAACGAG 59 19186303 19186322 ACTCGAATATCCAGGACGTG 59 NA Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081169,FBtr0081170 1 2 2 93 2L 19080485 19080568 CAACATAGATCAAGCGGTCG 59 19080411 19080429 ATCGTTGCTCAGATCGGAG 59 NA Drosophila melanogaster 61 CG15168 FBgn0032732 FBtr0081135 2 1 1 113 2L 18987819 18987837 CTAATTGCCGGATTTGCCA 58 18987976 18988065 CAGGATAATGTCCAATGGAAGG 59 NA Drosophila melanogaster 61 Mst36Fa FBgn0086681 FBtr0302225 2 1 1 80 2L 18675414 18675574 GAAGAAAGGTCTAAAGGGAAGTC 58 18675356 18675377 CTTCATTTCAGGCTTTGTATCG 58 NA Drosophila melanogaster 61 CG15153 FBgn0032663 FBtr0081045 2 1 1 81 2L 18091254 18091478 ACGAGATAAGCTACAAGATCAC 57 18091194 18091212 CAATCGGTGTCATAGGCAG 58 NA Drosophila melanogaster 61 CG5693 FBgn0040989 FBtr0081026 3 1 1 141 2L 18006797 18006815 TAATCCGGGCTACATTGGA 58 18006920 18006938 GTCCTTGTTGGATTGTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34170 FBgn0085199 FBtr0112361 1 1 1 60 2L 17311709 17311727 GAATCTGATTGTTGGCGGG 59 17311667 17311685 GGATCCGCAATTGAATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr36b FBgn0045486 FBtr0080963 2 1 1 82 2L 17179843 17179921 TGGAGGAATCCTTTGAAAGTC 58 17179965 17179983 CGTGATAGGGAACATACCC 57 NA Drosophila melanogaster 61 squ FBgn0002652 FBtr0080887 1 1 1 156 2L 16680643 16680716 TTTGTTAGACAACGCACGA 58 16680836 16680854 CATATGTGCATTTCGGTCG 57 NA InUTR Drosophila melanogaster 61 her FBgn0001185 FBtr0080883 1 1 1 103 2L 16678235 16678321 GATAAGCACGTCATCGCTG 59 16678388 16678406 CTCTTTATGGGCAGCTCCA 59 NA Drosophila melanogaster 61 CG4161 FBgn0028892 FBtr0080735 2 1 1 60 2L 15433564 15433584 CCTATTTGACGCTAAGGACTC 58 15433605 15433624 AGGAGCCGCATAATAATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15263 FBgn0028853 FBtr0080729 2 1 1 60 2L 15285552 15285571 GGTTATATCTCGGATCCGCA 59 15285594 15285612 GACGATTAACCTGGGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 UK114 FBgn0086691 FBtr0080746 3 1 1 124 2L 15274712 15274730 TGGAGGCTGTTCTAAAGGC 59 15274377 15274625 ATCCTTATTGAACACCCGCT 59 NA Drosophila melanogaster 61 Su(H) FBgn0004837 FBtr0080700 1 1 1 92 2L 15042230 15042313 GAATGGCTTTGGGTACGTC 58 15042369 15042387 ATACGTGAAGGTCAGACCG 59 NA Drosophila melanogaster 61 CG31832 FBgn0051832 FBtr0080726 1 1 1 60 2L 15031669 15031688 GACTTTGCTGTTCGAAGTGG 59 15031628 15031647 ATTTGGACTGCCACTAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 2 2 2 287 2L 14743256 14743275 TTAGAACGCTTTCGACAGTG 58 14743599 14743617 TAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7916 FBgn0028534 FBtr0080549 1 1 1 103 2L 13847072 13847091 CTACACCAATGCTGATCTCC 58 13847212 13847230 TGATCTCCATGCCTTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 DNApol-gamma35 FBgn0004407 FBtr0091627 1 1 1 60 2L 13831952 13831970 GGTCTGTGATAGAGCTGGA 58 13831856 13831874 CCATGATCACAGCCATCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 RpL24 FBgn0032518 FBtr0080524 3 1 1 237 2L 13394872 13394890 AGACCATGGTCAAGATCGA 58 13394588 13394606 GGCTTCATGTTACGCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6116 FBgn0032499 FBtr0080460 2 1 1 81 2L 13287248 13287267 CTATTCGGCGGAAAGAAGAG 58 13287311 13287389 CGTTAACTGGGATCTTCCG 58 NA Drosophila melanogaster 61 CG6180 FBgn0032453 FBtr0080398 1 1 1 60 2L 12708118 12708136 CACCCAGGTGAAGGATGAG 60 12708160 12708178 GGTGTACAGCTTATTGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ref2 FBgn0032439 FBtr0080376 3 1 1 119 2L 12611377 12611445 GCACTATCTCGCAACATGTC 59 12611277 12611296 GATCGATCCTCCTTGAACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0080338,FBtr0301019 1 2 2 81 2L 12166982 12167005 GTTGGTTATGTTGATCTACTTGGG 59 12167040 12167133 CAACTGACTCTGATCTAAGATCAC 58 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 1 2 2 80 2L 12131333 12131353 TACTGACCTATATGCTGCTCC 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 CG16997 FBgn0032413 FBtr0302854 2 1 1 60 2L 12111856 12111874 AAACTTCCATGTGGTCAGC 58 12111897 12111916 TTATGAACGAGGAGACCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6792 FBgn0032401 FBtr0080305 2 1 1 187 2L 12048281 12048357 TACTTCAAGCTTAAGAACCCG 58 12048114 12048132 AGGTGAGTGTCGTATTCCC 58 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 1 3 3 81 2L 12037051 12037165 TATAGCTAATGACTATGCTGATCCC 59 12036994 12037014 CTGATCCAGCTGGATGTAGAG 59 NA Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 2 1 1 66 2L 11695189 11695293 CTGACTAGGAACGTTGAGG 57 11695323 11695341 AAATGACGCTGTCGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12307 FBgn0032370 FBtr0080266 2 1 1 60 2L 11651627 11651645 CAGAGCTCTGTGAGTTGTC 57 11651585 11651603 GATTGTTAGACGGCGAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239,FBtr0080240 2 2 2 60 2L 11518902 11518921 TTCAGAAGCACATTACTGCG 59 11518943 11519019 TTTCCGTTACAAAGCGAAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 3 2 2 80 2L 11511227 11511246 GTCAACGGTGTATGATGAGG 58 11510838 11511186 ACATACCTTAGAGTCTCTGCT 57 NA Drosophila melanogaster 61 CG14915 FBgn0032335 FBtr0080193 1 1 1 60 2L 11071308 11071328 AACGTCTTTACAACGATCCAG 58 11071350 11071368 TTGCCAAAGTAGTTGGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18561 FBgn0032301 FBtr0080190 3 1 1 61 2L 10792416 10792437 ATGGCTCCATAAACACAAAGAC 59 10792376 10792394 CTTAAGCAGCCTCTTTCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6750 FBgn0032292 FBtr0080122 2 1 1 68 2L 10732186 10732205 ATCACCCAAATCCAGGACAG 59 10732077 10732095 GAGATACTTGCCGTTCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Lip1 FBgn0023496 FBtr0080124 1 1 1 80 2L 10700221 10700311 CAGTCTGTACTTTAATAGCCTGG 58 10700163 10700181 GTCATCCGGCATAGAAACC 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 2 4 4 80 2L 10414647 10414788 GTTGCTGTCAGAATCCGAC 58 10414832 10414850 CTCTCCAAGAGTGACGGTC 59 NA Drosophila melanogaster 61 CG5022 FBgn0032225 FBtr0079999 3 1 1 80 2L 10344680 10344701 CATTGTGTACAAATGCACTGTG 59 10344741 10345487 ATTCCCTTATGGAAGGGCTG 59 NA Drosophila melanogaster 61 CG31715 FBgn0051715 FBtr0079996 2 1 1 84 2L 10341857 10341875 TCCAGTACACTATGCAGCA 58 10341918 10342158 GTCCTTTCTATTTATGTCTGCTCC 59 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 1 2 2 60 2L 10300353 10300371 CTAAGTCCACAGGAATCGG 57 10300311 10300332 ACTGAAATGGTATGGAGAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31717 FBgn0051717 FBtr0079977 3 1 1 92 2L 10250819 10250905 ATGAGGACGTCATCACCAG 59 10250961 10250979 GAACGACAGATTGGAGACG 58 NA InUTR Drosophila melanogaster 61 CG13135 FBgn0032184 FBtr0079966 1 1 1 60 2L 10122710 10122728 ACTACTGATCGTTGGCTCC 59 10122668 10122686 TAGACCAACTGGCAGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 2 2 2 110 2L 9923290 9923374 GCAGTTGAGGATTCTACCCT 59 9923199 9923217 GTAGCTACAAAGATCGCGC 59 NA Drosophila melanogaster 61 CG4592 FBgn0032162 FBtr0079879 3 1 1 92 2L 9922128 9922148 GACTGCGATTATTCTGGACTC 58 9922201 9922275 GTGAGTGTCCATTGATTGCC 59 NA Drosophila melanogaster 61 hoip FBgn0015393 FBtr0079846 1 1 1 95 2L 9699930 9700016 CCAATATGACTGAGGAAGTTAATCC 59 9700069 9700087 AGTTCAATGCTTGCTGCAG 59 NA InUTR Drosophila melanogaster 61 gcm FBgn0014179 FBtr0079855 2 1 1 73 2L 9581106 9581202 CCCAATAGAAATTGCAATGGTC 58 9581054 9581072 AAGTGGGTCACTGGATAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13108 FBgn0032100 FBtr0079773 2 1 1 80 2L 9164787 9164805 AGTATCTGCGGGTCAAGTC 59 9164844 9165038 GATCATCCCAACTGGAATATACAG 59 NA Drosophila melanogaster 61 CG7778 FBgn0032025 FBtr0079606 3 1 1 141 2L 8349602 8349752 CAGGTTTCAGTGAATGGCA 58 8349857 8349875 TACAGGCGTTCATACTGCA 59 NA Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 2 2 2 168 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332449 8332468 GAAATTGATCACCGTCTTGC 57 NA Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079633 1 1 2 123 2L 8212778 8212796 CGTTTCATGGGCATTACGG 59 8212599 8212617 GATCGGAGGCAGTCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 lectin-28C FBgn0040099 FBtr0079527 1 1 1 60 2L 7857394 7857417 CCAATAGGTCAGAACTTAAGATGG 59 7857433 7857454 CTAGTCAATGCTTCCTGTAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079482 2 1 2 269 2L 7763380 7763400 CCAACGATCCCATATTCATGG 59 7763692 7764554 CTTCGTTATCGATGCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 3 2 2 83 2L 7392131 7392149 TTTACACCTGCCAAACCAC 58 7392010 7392087 CATCTAGTTCTTGTAGCTGACC 58 NA Drosophila melanogaster 61 CG31907 FBgn0051907 FBtr0079425 1 1 1 105 2L 7060756 7060839 CAGAATCGACCTGTACTCCT 58 7060670 7060688 TGGTCCATGGACTAGTGTC 58 NA InUTR Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 3 1 1 140 2L 6960471 6960548 TTGCACTTACAGCAAAGCG 59 6960651 6960670 ACAATTGGTTGATCAGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 sens-2 FBgn0051632 FBtr0079341 3 1 1 73 2L 6823040 6823058 CAAGAAGCGAAACTCCGAC 59 6831202 6831223 CCGTTAGTTGTTCAGTCTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11320 FBgn0031837 FBtr0113026 2 1 1 107 2L 6618248 6618266 ATCACCAAGAACCATCGCA 59 6618100 6618179 GATTTGGCACATGTACCATCC 59 NA Drosophila melanogaster 61 CG9542 FBgn0031821 FBtr0079265 2 1 1 66 2L 6488450 6488468 GAATTTGGCCGTGCTAGAG 59 6488350 6488368 CTTCTCAGTCAGTTCCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13993 FBgn0031776 FBtr0079191 1 1 1 91 2L 6069482 6069571 GACACAAGAGTTTACCAGTCC 58 6069624 6069642 CATTTCTCCTGCCTAGCCT 59 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 3 1 1 63 2L 6021148 6021218 GTTATCCCGAGTACGAGCA 59 6021245 6021263 AGATTCAGCAGCTTGTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 3 3 3 84 2L 5539760 5539781 TACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 cype FBgn0015031 FBtr0079072 2 1 1 63 2L 5327629 5327647 AATTCTGGTCAACGATCCC 57 5327674 5327759 GTTGGCATCGTACTTCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0079017,FBtr0302570 3 3 3 192 2L 5071307 5071325 GATGGAAATCACCCAGCAC 58 5071734 5071752 CTGTTCCTTGGTTTCACGC 59 NA DesignNoJunction Drosophila melanogaster 61 Psf2 FBgn0031599 FBtr0077461 1 1 1 171 2L 4386907 4386925 GATATACGGACCTGTGGGC 59 4386696 4386773 GGTAAAGAACTTTGAGCGCT 58 NA Drosophila melanogaster 61 CG3338 FBgn0031598 FBtr0077462 1 1 1 81 2L 4385254 4385333 GACATCGAGGAAATCAAGAATCTC 59 4385196 4385217 TGAAATCCTCTGTGATTTGCTG 59 NA Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 3 2 2 97 2L 3807049 3807143 GGAAACTAGTGTTGCTGGC 59 3807204 3807222 TGTGCTGGTCGTACATGAG 59 NA Drosophila melanogaster 61 CG42465 FBgn0259955 FBtr0300301 3 1 1 85 2L 3700287 3700369 GCGGATATAAATGGCTTGGT 58 3700412 3700435 TCAACATAGGAATAGAGGTCTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG16712 FBgn0031561 FBtr0077546 2 1 1 100 2L 3696460 3696540 TCAAGGATCCTATCTGTGGAC 58 3696380 3696401 ATTGGTTTCGGGATGATAACTG 58 NA Drosophila melanogaster 61 CG8851 FBgn0031546 FBtr0077526 1 1 1 80 2L 3521295 3521373 TCAACACCTCACAGGATCAG 59 3521415 3521434 TATCTCCAGAGTCCCTGTCC 59 NA Drosophila melanogaster 61 CG17219 FBgn0031494 FBtr0077650 2 1 1 136 2L 3029923 3029996 TCAGGACTACAACAAAGATGTG 58 3030088 3030111 GAGACCAATCTCCAGAATATAAGG 58 NA Drosophila melanogaster 61 alpha4GT1 FBgn0031491 FBtr0077670 1 1 1 80 2L 3022959 3023044 ATGTGGCGTACATAGAATCTC 57 3022899 3022918 GAGGATGATGAACATCCTGC 58 NA InUTR Drosophila melanogaster 61 CG2964 FBgn0031462 FBtr0077722 3 1 1 128 2L 2814058 2814076 CAACAATGTCCGTGTGGTC 59 2814168 2814249 TTCTTATCAGCAGGCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 3 4 4 82 2L 2792365 2792496 ACGTTCACCTTTAAGAGTTTGC 59 2792304 2792322 GAGAAGCGATCGAAGTCGA 59 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 1 4 4 60 2L 2769206 2769224 CTACCCGCAAATCTTCGTG 59 2769164 2769182 TGCCATTATCAGGGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3557 FBgn0031423 FBtr0077790 3 1 1 101 2L 2385445 2385518 TGTCGAATGAAGGATCAGC 57 2385362 2385380 AAGATGGATAAGCCGAGCT 58 NA Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 1 1 1 60 2L 2240266 2240356 GAAACTGTACGCACTGCTG 59 2240224 2240246 CACGTCGAATTCTGAGTTATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33543 FBgn0053543 FBtr0091509 3 1 1 133 2L 2001074 2001388 ATATAAACACCGTCAACTCGAC 58 2000962 2000980 ATCGGAGTCCGAGAAAGTC 58 NA Drosophila melanogaster 61 CG17650 FBgn0031365 FBtr0077901 2 1 1 81 2L 1758979 1758997 ATTTCAATAGGCGCAGGAG 58 1758642 1758935 GCTTCGAATTGTTGTTCCTG 58 NA Nonspecific Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 2 1 1 68 2L 1611868 1612026 AGTAGTACCTATTTCGAATCGG 57 1612055 1612073 GAGCTTGACTTCGGTAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918,FBtr0114554 1 2 2 60 2L 1517929 1517948 GAAGATGTCCACCATCAAGC 59 1517888 1517906 GTTCTTGATCGTCTGCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5139 FBgn0031323 FBtr0077977 1 1 1 60 2L 1198676 1198694 GAACAGGATCAGGAACAGG 57 1198634 1198654 AGTGGTAACATTCCATGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 2 3 3 81 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965137 15965155 GCTTGCGATAGTTGATGGC 59 NA Drosophila melanogaster 61 dwg FBgn0000520 FBtr0070487 3 1 1 132 X 2622175 2622193 AGAGTCAGACTCATAGCCC 57 2622289 2622588 TCTTCATCCAAATTGGCGA 57 NA Drosophila melanogaster 61 Sec22 FBgn0260855 FBtr0070141 3 1 1 85 X 700765 701014 TACCTATTCCACTACCTAATCGAG 58 701058 701076 TAATTGAAGGCCAGTCGCT 59 NA Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 1 2 2 80 3R 25991696 25991773 TGAATGCCAACATTGAAGTGG 59 25991636 25991654 CTTCGTTGTAGGCCAACAG 58 NA Drosophila melanogaster 61 Hr96 FBgn0015240 FBtr0084756 1 1 1 87 3R 20851912 20851931 CGCATTTGATCGACTATCCA 58 20852049 20852132 TTGGTGAATACTGTCAGCG 57 NA Drosophila melanogaster 61 CG5669 FBgn0039169 FBtr0084565 1 1 1 60 3R 20050518 20050537 CGACGAATACACCGAATACC 58 20050477 20050495 CTTGCAGGTAACGATACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515,FBtr0299516 3 2 2 87 3R 18239172 18239254 AGTCCAAGACGTAACTATCGA 58 18239303 18239321 TGTTCATGTTGAGGCTGGA 59 NA Drosophila melanogaster 61 CG13857 FBgn0038958 FBtr0084234 1 1 1 80 3R 18219774 18219794 CGTTAGCATTTCGATTAGGAC 57 18219233 18219734 TTACCCATTTGATAGCTGGTC 57 NA InUTR Drosophila melanogaster 61 CG10827 FBgn0038845 FBtr0084048 2 1 1 80 3R 16831306 16831481 TACGCAGGATACTCGTACC 58 16831244 16831262 AACCATGTATGGTTTGCCA 57 NA Drosophila melanogaster 61 omd FBgn0038168 FBtr0082848 2 1 1 80 3R 9506052 9506070 CTTTGCTATTCCTCCGTGC 59 9505926 9506010 GAATCGATTGACATTCTTGCC 58 NA Drosophila melanogaster 61 mRpS21 FBgn0044511 FBtr0082764 3 1 1 62 3R 9207219 9207296 AAGCCGTATCAGGTTCGTC 59 9207175 9207193 GTCCTCGTTGTAAATGGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 3 4 4 62 3R 7646930 7647007 AAATTGCGCAAGACAGAGG 59 7646886 7646904 GAACTCAGCGTCATCTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Hdac3 FBgn0025825 FBtr0078767 2 1 1 124 3R 1299892 1299911 AATGAAGATCTACAGGCCGT 58 1299656 1299743 TATAGGCCACGGAATTGCA 59 NA Drosophila melanogaster 61 CG17826 FBgn0036227 FBtr0076042 3 1 1 122 3L 11942988 11943066 ACTAAACACTATGGAGTGGCC 59 11943144 11943168 GATCAGATACTTGGTACAATCATCC 59 NA Drosophila melanogaster 61 CG32335 FBgn0063667 FBtr0273416 3 1 1 70 3L 1202918 1202936 TTGCTCTTTGAGGAGAGGC 59 1202782 1202884 AGAGCACCCTGTATGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG18367 FBgn0034460 FBtr0086469 1 1 1 80 2R 15524312 15524330 AGACACTTCGAGAGCACAG 59 15524372 15524749 GGTACAGAAGATTTGAGGCAG 58 NA Drosophila melanogaster 61 lbk FBgn0034083 FBtr0302084 2 1 1 80 2R 12053602 12053622 AATAATCGCCTAAGCACTCTG 58 12053661 12053746 TTGGTTAAAGTTGAGAGCTAGC 58 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 1 5 5 81 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 CG8771 FBgn0033766 FBtr0302596 1 1 1 80 2R 8572001 8572078 GGCAACTATGTCAAGAGCC 58 8571939 8571958 TTCTCTGAGTTTGTGCTGAC 58 NA Drosophila melanogaster 61 CG8677 FBgn0026577 FBtr0081477 3 1 1 80 2L 21221720 21221738 AAGGACCTGGGTCTTAACC 58 21221781 21222449 CCTTAGCTCAGGAACATCGT 59 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 2 1 2 106 2L 11790005 11790076 TGTCCCAATCAAAGGTTCC 57 11790203 11790379 CAAATCCATAACAGAAGACTCG 57 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 3 2 2 111 2L 9923292 9923376 AGGCAGTTGAGGATTCTACC 59 9923200 9923218 TAGCTACAAAGATCGCGCA 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817,FBtr0079818 1 2 2 106 2L 9251867 9251950 GGCTCAAGTAATGCCAGAC 58 9251779 9251797 GATTTGACTCCACCTCGTC 58 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 3 3 5 106 2L 835545 836562 CATCTACAATGCAGTGGGTG 59 835458 835477 TAAGAGCGGCATATCGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 3 2 3 192 2L 132073 132091 TGTGCTCACAAGACTTCCA 59 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 1 1 1 210 2L 84260 87020 GATTCACCCAATTCCAACG 57 84068 84086 GAGTCGTCAAACCTACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG41130 FBgn0069921 FBtr0100311 3 1 1 60 4 1222996 1223014 CAGACGTTACAAATGTCGC 57 1223035 1223056 TGCAGATATTAGGTCCATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mad2 FBgn0035640 FBtr0077113 2 1 1 80 3L 5805863 5805885 GCTAACCATTCTAATGTCCAAGG 59 5805744 5805825 GAGAGCCATTCTTCAGTTTGG 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG12984 FBgn0037042 FBtr0078286 3 1 1 81 3L 20985190 20985208 GCTTCTGAAGATGCTGCAG 59 20985253 20985705 CTCCAATTCGTTCACGACC 59 NA Drosophila melanogaster 61 Cyp12d1-p FBgn0050489 FBtr0089419 3 1 1 89 2R 7008750 7008769 CATCTTTATGCAACCCAGGG 59 7008616 7008698 CGGATTTCCTTAATGCGCT 58 NA Nonspecific Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079316,FBtr0079315 3 2 2 60 2L 6686252 6686271 TCTACAGTTCACTGATGCCC 59 6686211 6686229 GCCATCTGTTGACTTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0112956,FBtr0070964,FBtr0070966 3 6 6 80 X 6703099 6703117 AAACACGAAAGGGAACCTG 58 6703161 6703526 CTCGAATATCTTACGGCGC 58 NA Drosophila melanogaster 61 CG33797 FBgn0053797 FBtr0091801 3 1 1 66 4 864299 864317 CAGAGATCCATTGTGCAGG 58 864347 864365 TCCACAGCCACTTAATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978,FBtr0084977 1 2 2 95 3R 21877373 21877394 GACAGTAATGATTATCGACCCA 57 21877245 21877317 ATCCAAGCGCTTATCATGC 58 NA Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 2 2 2 82 3R 20607107 20607180 ATGACTTCGCTAACGTGGT 59 20607226 20607244 AAACAGATCGATGTCGTGC 58 NA Drosophila melanogaster 61 CG15497 FBgn0038894 FBtr0084113 1 1 1 94 3R 17491498 17491566 TACTTCACAACAGGTGTGC 58 17491624 17491642 AGACCCTGTGATTCACCTC 58 NA Drosophila melanogaster 61 CG18577 FBgn0037870 FBtr0082341 1 1 1 60 3R 7022049 7022067 GAAAGGCTATCGGAGTTGC 58 7022473 7022493 GTTTAAACGCTCTGTCATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG2091 FBgn0037372 FBtr0078678 1 1 1 109 3R 1579957 1580036 CCAGGATTTGTGCAGTGTG 59 1579866 1579884 AGAGATCAGGAGTCTCCCG 59 NA Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0289975 3 1 2 95 3L 22680896 22680914 GCAACATCGTCGAAACCTG 59 22681034 22681053 TGTTGATGAAGTAGGAGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6114 FBgn0036544 FBtr0089527 2 1 1 80 3L 15897954 15898257 CGAATAGTGTTGTGAATCCCA 58 15897894 15897913 GTGTATTGCAAGGAGATCCG 58 NA Drosophila melanogaster 61 CG14495 FBgn0034293 FBtr0086810 1 1 1 90 2R 13936742 13936847 GCATCAATAAGAACGGAATCCA 59 13936673 13936691 TAGTCCTCGTGAAGTCGTG 58 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 2 4 4 111 2L 5984933 5985036 ACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 tral FBgn0041775 FBtr0075959 3 1 1 261 3L 12511918 12511937 AACAATTATCGCATGGGTGG 59 12512161 12512252 ACTATTGTGAAACTGCCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CR41509 FBgn0085792 FBtr0114245 1 1 1 81 YHet 327968 327986 AACAGATGGGTAGCGATCG 59 327814 327923 AAATAGTCGCCACGATCGT 59 NA Drosophila melanogaster 61 FucTC FBgn0044872 FBtr0299926 1 1 1 63 X 22411731 22411749 GAAACTGCGGAACACTCAG 59 22411149 22411167 TCAGTGTCCAACATCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 3 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 1 2 2 139 X 20293017 20293100 CAATTACTGCTATCGCTGCG 59 20292897 20292915 GAAAGTAGTCCGCCTGAGG 59 NA Drosophila melanogaster 61 CG9571 FBgn0031086 FBtr0070032 3 1 1 61 X 19985701 19985722 CCTCATTCTCATTTCATTCAGC 57 19985661 19985681 GTATGATGATATGGCTCCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7992 FBgn0031004 FBtr0074690 3 1 1 195 X 19140421 19140780 CGATGGATTTGACCACGTC 59 19140244 19140262 TACATTCCGGCTGTAGGAG 58 NA Drosophila melanogaster 61 CG7349 FBgn0030975 FBtr0074648 1 1 1 136 X 18789921 18789995 ATTGATTCCAGGGACGAGG 59 18790095 18790113 TGAATGATGGCTCTAGCCG 59 NA Drosophila melanogaster 61 Pk17E FBgn0004462 FBtr0074634 1 1 1 80 X 18685099 18685184 CACAACCTCCATATTCTATCGG 58 18685223 18685243 AACCAGATCAATGGAGAAGTG 58 NA Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074632 1 1 2 81 X 18673864 18674717 GCACTACGTGAAAGGATGC 59 18674762 18674780 GATCGGAGCGTACATCCTC 59 NA InUTR Drosophila melanogaster 61 upd3 FBgn0053542 FBtr0113465 3 1 1 84 X 18174203 18177436 TCACTAGCAAACAGTTGAACC 58 18177482 18177500 TTGATGTTGCGCATGTACG 59 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 3 3 3 80 X 17462411 17462430 AACCAATTTACACGGAGCAC 59 17462282 17462369 CGGTCTTAACGTCTTCAGTG 58 NA Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096,FBtr0110990 2 2 2 81 X 16847293 16847376 TACCTTAAGAATTCTATCACCTCGG 60 16847414 16847433 TTACGAAGATCAAACGTCGC 59 NA Drosophila melanogaster 61 CalpC FBgn0260450 FBtr0074226 3 1 1 129 X 16220580 16220598 TGAAGGAGCTACTCACCAC 58 16220688 16220783 CTGGAGAGTCTGTAGTTAACGT 59 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 2 3 3 80 X 15858112 15858135 CCAACTTTAATGACTACACCTCAC 59 15857980 15858073 CGAATGTTTCGCCAGTCAG 59 NA Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089702 3 1 2 65 X 15471876 15471896 GGCACTTACCACTTTATTGGA 58 15471786 15471849 AAATCGGACACGACTTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG7860 FBgn0030653 FBtr0074045 2 1 1 67 X 15463741 15463759 AATTCGAGGATCAGGTGGC 59 15463790 15463808 CTTGTCATCGGTCAGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 1 2 2 80 X 15360145 15360260 CGGAAACATAAACAAACTGACG 58 15360301 15360319 TTCAGCACGATCAGATCCT 58 NA Nonspecific Drosophila melanogaster 61 Ste:CG33245 FBgn0053245 FBtr0300094 1 1 1 110 X 13943517 13943535 TCTGATACACAGCTGGACG 59 13943365 13943443 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 3 2 2 80 X 13582343 13582362 GATACTGCAGTCCATTCTGG 58 13582186 13582301 CTGTAGCCACAAACTTCCAG 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 3 6 6 86 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545564 12545584 GGTATGATCGAACCGTATGAG 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300201,FBtr0300202,FBtr0300204,FBtr0299860 2 7 7 98 X 12189632 12189651 ACCGCATCCTTCTATCAGAG 59 12189712 12206837 TACGGATACACGGTTCTCG 59 NA Drosophila melanogaster 61 CG1840 FBgn0030351 FBtr0073571 2 1 1 196 X 11782682 11782759 AAACAGTTGCTTGCATCGT 59 11782918 11782937 TTAGGCCTTAATCCACCTCC 58 NA Drosophila melanogaster 61 CG9360 FBgn0030332 FBtr0073613 2 1 1 88 X 11658000 11658018 CATCGAAGTACGCAGTCAC 58 11657848 11657949 ACTGATGCTCGTAATCTTGG 57 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619,FBtr0073617,FBtr0073616 3 5 5 61 X 11606811 11606829 GATTTGGACGACGAAAGCC 59 11606366 11606385 TCTGTCTCCGATTCTGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073532 1 1 3 122 X 11572293 11572443 ACGGAAAGATGAGTCCCAG 59 11572189 11572207 GTTCGGTGTTACTTGTGGG 58 NA InUTR Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 2 7 15 108 X 11275917 11275936 ATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 CG15198 FBgn0030283 FBtr0073447 2 1 1 93 X 11142472 11142492 TTCAATCCCTTCTACATTGGC 58 11142547 11142565 TAGTTGGCTGACAGTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sofe FBgn0030242 FBtr0073409 2 1 1 60 X 10750423 10750441 GATTGCCTTCATCGAGCAG 59 10750381 10750400 TTTCAGTGAAAGATCCCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 2 2 2 131 X 8762244 8763251 GAGCTGGAGACCAGATTGG 59 8763346 8763364 CAGTTGGTGATGATGGTGC 59 NA Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081,FBtr0071248 2 2 2 81 X 8302347 8302428 GACTTCATGAACCCAGGTG 58 8302284 8302304 TTCTTAGAAGTCATCTGCACG 58 NA InUTR Drosophila melanogaster 61 Tbh FBgn0010329 FBtr0089999 1 1 1 80 X 7916727 7916746 GATGGATGAGTTCACGTTGG 59 7916789 7916865 ATTGTGCCCTCATGGAGTC 59 NA Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300759,FBtr0300760 1 2 2 95 X 6917121 6925879 TTTATGCCAAGGGTTACGC 58 6917044 6917064 TTGGCATCAAATAGTGACTGG 58 NA Drosophila melanogaster 61 Mcm6 FBgn0025815 FBtr0070952 1 1 1 60 X 6570068 6570088 AAATATTCAGCTATCGGCACC 58 6570108 6570128 GTCCACGAGAATGAAGAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070904 3 1 2 132 X 6235369 6236109 TCATACGGAATTCGACTAAAGC 58 6236202 6236220 GGGAATACTGTTCCTGGCA 59 NA InUTR Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070236 1 1 2 89 X 1240146 1242265 ATGAGTAACCTCACTGGCT 58 1240075 1240093 AATGGTAAAGGTCAACGGC 58 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 1 2 4 125 X 227684 227705 CACTTGCATCAAGTAACTTAGC 58 211944 227598 CCTCTTCCGGAAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 2 2 2 82 4 1140617 1140636 CTCGCCTAGACTTATGTGAC 57 1139635 1140572 GTGCTTTGTCTTAAGGGCT 58 NA Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 2 2 2 95 4 330249 330328 TATTGCAGCAGATTGGTCAG 58 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 CG9747 FBgn0039754 FBtr0085573 2 1 1 82 3R 26013164 26013182 ACCCACAAGAGCTACAAGG 59 26012533 26013118 TACAGGGTGTTCTGTCCAG 58 NA Drosophila melanogaster 61 CG7903 FBgn0039730 FBtr0085608 2 1 1 80 3R 25820790 25820879 TGAATACTACCGCCAAGGT 58 25820728 25820748 CATAGTTGGTGAACAGTCGAC 59 NA Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 2 1 1 60 3R 23410080 23410356 ACTCGCAAGGAAGAATGGT 59 23410380 23410398 TTGATCAGGTCCAACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG3330 FBgn0039511 FBtr0085170 2 1 1 60 3R 23155863 23155882 CAAATCACTCAAGTCCTCCA 57 23155822 23155840 CTTGAGGGATGACTTCTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmu FBgn0015737 FBtr0085164 3 1 1 141 3R 23114754 23114844 TTCAAGGACTATATTGTGACCC 57 23114946 23114964 TGTAGATCTCGTTGTTGCG 58 NA Drosophila melanogaster 61 Mst57Da FBgn0011668 FBtr0084914 1 1 1 88 3R 21657583 21657603 CCGATATGAAGTTCCTAGCTC 57 21657515 21657536 GTTGTGATTTGTATTCTGGCTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG17197 FBgn0039367 FBtr0290204 1 1 1 64 3R 21600209 21600227 CGTTAAGAGTCCTCTGCCC 59 21600085 21600182 GTGAATGATGCTGAACACGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867,FBtr0084620 3 2 2 114 3R 20212174 20212193 GCTATAATGGACGTGACTGC 58 20212017 20212099 TTTGGCAAGCTGAATATGGTG 59 NA Drosophila melanogaster 61 CG13836 FBgn0039060 FBtr0084370 2 1 1 60 3R 18995836 18995854 ATAAATCGGAACTGGTGGG 57 18995878 18995896 TTATCCTTCTCATCGGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17121 FBgn0039043 FBtr0084361 1 1 1 80 3R 18871185 18871259 CCTACATAATGACCACCAAGGA 59 18871126 18871145 CTAAGGCATTTACTGCCACC 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 2 3 3 80 3R 18338652 18338818 GGTCGACAGATACTACGCC 59 18338861 18338880 AATAGCATGATGAACACGCG 59 NA Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0084138,FBtr0300075 1 2 2 60 3R 17700238 17700258 GGATACGGCTATGAAATTCCC 58 17700279 17700298 CGGACTCTGAATTTGAACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 3 1 1 187 3R 17694985 17695004 TGGAACCTGAGATCAAGGTG 59 17694704 17694781 TAATTCAGCTTGTTGTTCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3822 FBgn0038837 FBtr0083987 2 1 1 80 3R 16687385 16687460 TCTTTAGGGACTCAAAGATCTCC 59 16687327 16687345 TGGCTGTAAAGACGGAAGG 59 NA Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0083899 3 1 2 103 3R 16152108 16152126 TACCAACCACCTCAAGACG 59 16151860 16152042 GCATTGAGTGATCCACTGTG 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 3 5 5 85 3R 14585655 14585786 ACCTGAAAGATCCGGACTG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 Muc91C FBgn0038642 FBtr0083687 2 1 1 60 3R 14518353 14518371 TTTCTGTGGTGGCTTTGTC 58 14518088 14518329 ACTACACTGCTGCTCTTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sll FBgn0038524 FBtr0083462 2 1 1 81 3R 13433388 13433659 GCATTTGCTACAGAGCATCC 59 13433701 13433721 AGATAAACAATTGTCCGACCG 58 NA Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 1 2 2 80 3R 12852569 12852587 TCCATCGGTGCTGAATGAG 59 12852629 12852711 GACAGTAGATCCAAACGACCT 59 NA Drosophila melanogaster 61 CG32855 FBgn0052855 FBtr0083234 3 1 1 60 3R 11905195 11905214 AAACCCACAAAGGAAATCCG 59 11905154 11905174 TTATGTGTCCCGAATCATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5302 FBgn0038351 FBtr0083149 3 1 1 80 3R 11463377 11463396 TACAATCCAATGACGATGGC 58 11463434 11463513 GGGCCTTATATTATCTGTGTACTG 58 NA Drosophila melanogaster 61 CG4338 FBgn0038313 FBtr0083066 1 1 1 60 3R 11101821 11101839 CATCAACTACGGAAAGCCC 58 11101862 11101881 GTATAGAGTGGCGGCTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 3 2 4 89 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055586 11055604 AAAGATTGCCTTGTACGCC 58 NA Nonspecific Drosophila melanogaster 61 CG34273 FBgn0085302 FBtr0112468 3 1 1 63 3R 10342859 10342877 GAATCGAGTACCAGCACCA 59 10342903 10342922 ACGATGTGGTAGACTCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6744 FBgn0037901 FBtr0082402 1 1 1 106 3R 7259970 7259988 GATCTAAGGGTTCGCAGCA 59 7259675 7259901 GATTGGACTCGTTTGAGCTG 59 NA Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 2 2 2 117 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597847 5597925 TCTGATCCACTTTCTTCAGCT 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 3 2 2 126 3R 5121254 5121408 GAAATTTGGGAGACACAAACG 58 5121148 5121166 AATCAACGAATGTTGGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 CG9839 FBgn0037633 FBtr0081934 2 1 1 82 3R 4630962 4630980 GAGAGTGATTCCGACGAGG 59 4630833 4630919 TAGTCATCCATATCGTCCTGAC 59 NA Drosophila melanogaster 61 Cks85A FBgn0037613 FBtr0081949 2 1 1 163 3R 4541377 4541468 GAATACAGGCATGTTATCTTGC 57 4541235 4541254 TTGCGTCGGAATAGAATCAC 58 NA Drosophila melanogaster 61 Or85b FBgn0037590 FBtr0081900 2 1 1 82 3R 4335968 4335986 TAGCTAGATCGCAGAAGGT 57 4335847 4335925 TTGAAGCAGATCTGTCATAGTG 58 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 2 3 3 80 3R 4068883 4068961 CGTCAACTTATCGCTAAACTCC 59 4068824 4068842 GAAGTTGACGAGTTGCGAG 59 NA Drosophila melanogaster 61 CG7878 FBgn0037549 FBtr0113205 3 1 1 84 3R 3949153 3949174 TTCTTCTGAGTCCAATAAGGAC 57 3949219 3949292 AGTAGCTGCTATCGAAGCT 58 NA Drosophila melanogaster 61 CG10928 FBgn0040522 FBtr0081746 1 1 1 60 3R 3635306 3635464 GGCAATCACTTATGGAAATTGC 59 3635484 3635503 GAGCGAGTTAAATCGAATCG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15184 FBgn0037459 FBtr0081680 1 1 1 127 3R 2445719 2445865 CAGGACTCCCAACATCCTG 59 2445956 2445974 TTAGCAGTTCTCGGCTTCC 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081673,FBtr0081672 1 3 3 92 3R 2319013 2319031 TTAACCAGATCCCTGGACG 58 2319086 2319277 CTCGTCCATATTTGCAGCAG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG1347 FBgn0037363 FBtr0078716 3 1 1 92 3R 1502275 1503001 ATGAGAAGCTCTGCCTACG 59 1503057 1503075 TTCCAAGGCGATAGATCGG 59 NA Drosophila melanogaster 61 CG31548 FBgn0051548 FBtr0078736 2 1 1 60 3R 1461896 1461915 TTCCTGGAACACTCCAAGAC 59 1461855 1461873 CCACCTCCTTGACATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 3 2 2 82 3R 468365 468479 CCCAACTATCTAAACTTCCTTGC 59 468518 468539 CAGTACTGCAGATACTTCAGGT 59 NA Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 2 2 2 82 3L 21439403 21439424 GGCCTAAGCGAAATAGATTTCC 59 21439467 21439552 ATCGTGGACACATTCTGCT 59 NA Drosophila melanogaster 61 kin17 FBgn0024887 FBtr0078181 2 1 1 80 3L 20350900 20350922 GACGTAATTGACAGATATCAGGG 58 20350961 20351052 CTCCAAATGAGCTTGATCCA 58 NA Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 3 2 2 81 3L 20296381 20296400 GATCATGGTCAACCGAAGAG 58 20296443 20300947 CCAATCTGATATGGCGTCTG 58 NA Drosophila melanogaster 61 CG17147 FBgn0260393 FBtr0074824 1 1 1 86 3L 20216991 20217400 GACTCCTAACCTCAAACTTGGA 59 20217447 20217465 TCGTATTCACCGACACTCG 59 NA Drosophila melanogaster 61 CG14183 FBgn0036931 FBtr0074907 3 1 1 80 3L 20018025 20018043 TTGGATCCGAACGAGTTCC 59 20017902 20017986 ATCCATTATCTTCTCATCTGGAGG 59 NA Drosophila melanogaster 61 CG12519 FBgn0036872 FBtr0074930 2 1 1 94 3L 19465641 19465714 TAATGTTCAAATCCGCCGT 57 19465772 19465790 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075042 1 1 4 109 3L 18988585 18988603 AAGAAGCAGAATGTCGGTG 58 18985789 18985807 CATAGGTGATGGAGGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0114591,FBtr0075063 3 2 2 92 3L 18862847 18862865 TCGATGGAAATCCCGATGG 59 18862984 18863004 ATTTGCCATCGATAAAGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32027 FBgn0052027 FBtr0075059 1 1 1 80 3L 18835358 18835456 AGGAATATGAGGAGACGGTG 58 18835496 18835517 GAAATATGTAACAGGTTGCCAG 57 NA InUTR Drosophila melanogaster 61 W FBgn0003997 FBtr0075133 2 1 1 76 3L 18177899 18177917 CAGGATGTACCAGAGCCAG 59 18166604 18166622 CCGTGAAATTGCAAGAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 3 2 2 80 3L 16382906 16382926 AATGAATCACAGATCGAACCG 58 16382966 16383044 TTGGTAGGACTGTCTATTGGC 59 NA Drosophila melanogaster 61 CG33687 FBgn0053687 FBtr0091667 2 1 1 91 3L 16191403 16191422 TCAACCTTCATCAATGCCTC 58 16191546 16191564 AAGAATGCCCTTTCCAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5414 FBgn0036569 FBtr0302328 1 1 1 80 3L 16093506 16093524 GACCAAGTTTCCCAATCGT 58 16093566 16093644 GAAACTGCAATCTTGTTCTCC 57 NA Drosophila melanogaster 61 Hip14 FBgn0259824 FBtr0075518 2 1 1 80 3L 15983092 15983110 GTGTGCTTCCTTAAGTCGT 57 15983151 15983240 CTCAATGATGGTCTTAAATCGC 58 NA Drosophila melanogaster 61 CG13449 FBgn0036520 FBtr0075590 1 1 1 90 3L 15604505 15604587 GGTCGATATCTCAATAGAGCTC 57 15604436 15604454 AAACTTTATCGTCGACGGG 58 NA Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075754 3 1 2 89 3L 13872156 13872174 GTTAACACCGATTTGTGCG 58 13875770 13875788 GCAACTGTTTGATCTCCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acp70A FBgn0003034 FBtr0075836 3 1 1 113 3L 13294749 13294769 AGCTCTATTCTTGGTTCTCGT 59 13294843 13294927 CACTTATCACGAGGATTGGG 58 NA Drosophila melanogaster 61 CG14118 FBgn0036323 FBtr0075870 1 1 1 62 3L 12885953 12886435 TCATCAAGGTTCTCCCTGC 59 12886461 12886479 TGCACTTTATCCAAACGGG 58 NA DesignRelaxed Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 3 6 6 86 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208827 12208845 GTTTGTCCTTTGACCAGGA 57 NA Drosophila melanogaster 61 CG42255 FBgn0259140 FBtr0299545 1 1 1 80 3L 11804225 11804305 TACTTGGACGTGTATTTATCGG 58 11804166 11804186 GCTATGTGACAACAGGATGAG 58 NA Drosophila melanogaster 61 CG14177 FBgn0036013 FBtr0076378 1 1 1 60 3L 9591213 9591231 GGGAGTGCTTACGATTTGG 58 9591253 9591273 GATATAGCCATTCCGTAGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273348,FBtr0273349 1 2 2 131 3L 8638385 8638866 GGAAACCAAGTACTTTCATGAC 57 8638275 8638293 TTGTAACGATTCGTGCCTC 58 NA Drosophila melanogaster 61 Oseg1 FBgn0035891 FBtr0076663 2 1 1 80 3L 8402621 8402700 TGGATTGTTTGACGAAGCC 58 8402559 8402578 AGAGCGGATTGAGCTAATCC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112693 2 1 15 124 3L 7657020 7657038 GTGGTCGCAGTTTCAACAG 59 7656411 7656932 TTCGTGAAGGGTTTCTCCC 59 NA Drosophila melanogaster 61 CG14837 FBgn0035797 FBtr0290223 3 1 1 145 3L 7551436 7551456 GGAGATGGTTCTGATAAGTGC 58 7550665 7551329 CTTTACGACTTTCCACGGC 59 NA Drosophila melanogaster 61 CG14835 FBgn0035782 FBtr0076866 3 1 1 60 3L 7430221 7430239 ATTTGATGGCCCAATTCGG 58 7430179 7430198 AGGACATTGACGGTTAACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 3 3 3 95 3L 5338823 5338841 ACTTATCCGGATTGGGTGC 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 CG10674 FBgn0035592 FBtr0077181 2 1 1 141 3L 5129100 5129187 GATGATGAAGCTCAAGTGGTG 59 5128979 5128997 GAGGTAGGACATCACCACC 59 NA Drosophila melanogaster 61 CG32232 FBgn0052232 FBtr0073373 2 1 1 60 3L 4995149 4995169 GTATTATTCAGCGGCATCTCC 59 4995109 4995127 CGGGAATCGTAGAGAATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr64Ab FBgn0035511 FBtr0073253 2 1 1 134 3L 4211340 4211468 CCCTGATCAAGATCACCCTC 59 4211225 4211243 TATAGGCGAACGCGTACTG 59 NA Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 3 1 1 79 3L 4003890 4003909 CTCTTCGGGAAATACATGGA 57 4003949 4004140 TGATACTGATAGTTCTGCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 3 2 2 80 3L 3202190 3209297 CTGAGGAATAGTGTATTCCTCAC 58 3209335 3209355 ACCCACGTCTATTTGAATCTG 58 NA Drosophila melanogaster 61 cue FBgn0011204 FBtr0072706 1 1 1 89 3L 1504450 1504468 CTCCACGGAGATATGCTCC 59 1504312 1504397 TCCTCACAGATGCTGTGAC 59 NA Drosophila melanogaster 61 Mkp FBgn0083992 FBtr0110977 1 1 2 82 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183628 183647 AAAGTTCGAAAGTCGTGGAC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 5SrRNA:CR33353 FBgn0053353 FBtr0086345 1 1 1 60 2R 15653743 15653761 ATACATCGGTTCTCGTCCG 59 15653701 15653719 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3570 FBgn0035035 FBtr0072317 2 1 1 64 2R 20491422 20491440 TACTTCTTTACCGAGGGCA 58 20491468 20491486 TAGGATTCCAGGAGTCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165,FBtr0072179 3 2 2 80 2R 19956797 19956818 CATAAACAAATCAATCGGCGTC 59 19956854 19957281 TCTATACTAACTCGACCATACTCG 59 NA Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071856 1 1 2 107 2R 18496116 18496199 CGGTTCTGCAATTGAAGCA 59 18496270 18496288 CTTGCTGTAGGCACTTCCT 59 NA Drosophila melanogaster 61 CG11298 FBgn0034721 FBtr0071819 2 1 1 60 2R 18236130 18236148 CATTACTCGCGACATGGAC 58 18236172 18236190 CAGACGTTTCGAGATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18735 FBgn0042098 FBtr0071744 2 1 1 60 2R 17686279 17686299 GTAAATGGCTTCTACCATCGT 58 17686239 17686259 TATCCTGACGATTATGCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13422 FBgn0034511 FBtr0086214 3 1 1 60 2R 16414126 16414145 CTGTACTATTGGACAACGGC 58 16414168 16414186 ACCTCTGGTTGTAGTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Toll-7 FBgn0034476 FBtr0086336 2 1 1 60 2R 15717532 15717555 TGGTATCCCAGAATCGTATATTCC 59 15717573 15717592 GAGCAGAAAGAGAAGAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 1 2 2 88 2R 14683829 14683847 CTCCCTTCGCGTTAATCTC 58 14683656 14683778 CATTCCAGTCGAATTCAGGA 57 NA Drosophila melanogaster 61 CG5742 FBgn0034304 FBtr0086780 2 1 1 60 2R 14037982 14038002 AATGAGCAGGAATGCTTTCAG 59 14037942 14037960 CCACCTCATCCTCCATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30459 FBgn0050459 FBtr0087015 1 1 1 147 2R 12921028 12921046 GTTCTGAACGTTATGGCGA 58 12920834 12920919 TGATGTTTCGTTAAGTCGTCC 58 NA Drosophila melanogaster 61 Cng FBgn0014462 FBtr0087187 2 1 1 90 2R 12135410 12135745 AGTCGCATTACAGATGGCT 59 12135338 12135356 TTGATCTCCCAGAAGACCG 58 NA Drosophila melanogaster 61 CG30090 FBgn0050090 FBtr0087279 3 1 1 90 2R 11577494 11577515 ATAAACTCAAATCCGTGGATGG 58 11577566 11577640 CTGTTAGGACAAACCGCTG 58 NA Drosophila melanogaster 61 CG33792 FBgn0053792 FBtr0091796 3 1 1 116 2R 8520438 8520462 GGAGGCATTAACTGATATTAAGGTG 59 8520633 8520652 TCCGTCAAATGGCTAATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 SmD3 FBgn0023167 FBtr0087986 2 1 1 255 2R 8056594 8056612 TATACTGCCCGACATGCTG 59 8057360 8057378 AGTAGGCAGTTCCTACAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30036 FBgn0050036 FBtr0088050 1 1 1 107 2R 7866418 7866436 ATGTACCTGAGTCCACGAC 58 7866274 7866292 CCCTTGGTCCAGATAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Dmn FBgn0021825 FBtr0088641 1 1 1 182 2R 4779486 4779589 CCGGGAATAGCTTATGACCA 59 4779734 4779752 ATCCGTGAAGTCCACACTC 59 NA Drosophila melanogaster 61 CG30356 FBgn0050356 FBtr0088717 3 1 1 60 2R 4616731 4616751 AATTACATGAGTCTGTCGGAG 57 4616691 4616710 TGTAGTTAAATCTTCGCGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 2 2 2 60 2R 3679896 3679914 TCCGTTGTGGATCTTACCG 59 3679854 3679875 TAGCCTTGATTTCGTCATAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11107 FBgn0033160 FBtr0088966 3 1 1 80 2R 3275864 3275885 CCAGAAAGAGATTACCTAGAGG 57 3275923 3276223 TAGGATATCACCCTCAATTTCC 57 NA Drosophila melanogaster 61 Or42b FBgn0033043 FBtr0086051 2 1 1 84 2R 1684769 1684851 CAGCAACATAAGTGTGGCA 58 1684703 1684723 GTCCGTCTTAAATTTGTCAGC 58 NA Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0081491 2 1 2 84 2L 21199946 21200216 ACAAACCCATTACCAATCGAG 58 21199882 21199900 ATCATACGCTTGGTGATGG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 1 2 2 80 2L 20074332 20074787 CGGACACAACTATACAGTTGAG 58 20074273 20074291 AGCTCGGTGATGTTTAGCA 59 NA Drosophila melanogaster 61 amos FBgn0003270 FBtr0081081 3 1 1 60 2L 18596601 18596619 GTACTGGAACAAGCAGCAG 58 18596559 18596577 TGATGACATGGAAGTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7094 FBgn0032650 FBtr0080990 1 1 1 60 2L 17554747 17554766 GGATCACACTTATCTTCGCC 58 17554706 17554727 GTAATGATGATTCAGTGAGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15140 FBgn0032631 FBtr0302408 1 1 1 97 2L 17286558 17286680 TACTTCAGGTGAAACCCTGG 59 17286739 17286758 TATTCATTCCATTGGGCCGT 60 NA Drosophila melanogaster 61 CG31816 FBgn0051816 FBtr0080868 3 1 1 86 2L 16542724 16542744 GATAATCTTACCACCGAAGCG 59 16543001 16543019 CAAGTGCGACATCGATACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34165 FBgn0085194 FBtr0112356 3 1 1 95 2L 14714011 14714029 GATTTGAAGGTGGTCTGCA 58 14714088 14714106 TGAAGATGACACCCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080589 2 1 2 83 2L 13980374 13980392 TAAGCACCAGAACTCAGCA 59 13980436 13980518 GTAAAGCCCAAGTAAGTCTCAG 58 NA Drosophila melanogaster 61 Ance-3 FBgn0032536 FBtr0100327 3 1 1 81 2L 13917578 13917599 GGGACTACTACAAAGATCCCTC 59 13917640 13917985 AAATGCCACCTTGTCAATGG 59 NA Drosophila melanogaster 61 CG6565 FBgn0032513 FBtr0080468 3 1 1 81 2L 13375141 13375221 ACTCATACAAGGTTTATGCTCG 58 13375263 13375281 CGACGGTAATCCAAATCCG 58 NA Drosophila melanogaster 61 CG6287 FBgn0032350 FBtr0080222 2 1 1 113 2L 11152549 11153422 TCGTTGTCCTGAACACTCC 59 11152454 11152472 CCTCCTTCATGCTCTGACC 59 NA Drosophila melanogaster 61 CG5337 FBgn0032249 FBtr0080043 3 1 1 112 2L 10433938 10433956 GCACCAATCCGTTCTTCTG 59 10433770 10433864 ACTCATACCCTGGGAATAGGA 59 NA Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 3 2 2 88 2L 10153792 10153874 GACAGAGAAGCCTTCATTAGC 58 10153924 10153942 GAACGACCACTCGTATCGT 59 NA Drosophila melanogaster 61 CG32983 FBgn0052983 FBtr0079737 2 1 1 60 2L 8865984 8866005 TTACATAGAAGCCGTACTACTG 57 8866024 8866044 CGACGCAATAAACATTAAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32988 FBgn0052988 FBtr0079736 1 1 1 60 2L 8865036 8865056 GTGTACCTATCCTCCGTAGTG 59 8865078 8865096 CCGACAGTATGATCCACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp5 FBgn0011283 FBtr0079455 3 1 1 61 2L 7497296 7497314 ATCATTCTGGTGGCAATCG 58 7497253 7497271 TCCTTCTCGTCAAAGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wee FBgn0011737 FBtr0079371 3 1 1 130 2L 6912050 6912068 TTGACTCCAAGAGCAAGCT 59 6911842 6911958 AAGAAGATTGACTCGTTGCTC 58 NA Drosophila melanogaster 61 Tig FBgn0011722 FBtr0079275 3 1 1 86 2L 6422509 6423135 TAAGAACTCGCATCACAGGA 58 6422442 6422460 TGATAGGTCTCGTAGCCCT 59 NA InUTR Drosophila melanogaster 61 CG11029 FBgn0031735 FBtr0079136 2 1 1 60 2L 5747386 5747405 GCTGACCAAACTAACTGCTC 59 5747428 5747446 AGAGAAGAACCTCCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta4R1 FBgn0031442 FBtr0077697 1 1 1 60 2L 2653186 2653204 ATACTGGCCTCGGATACCA 59 2653228 2653297 TTCTGACCTCGTCATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 1 3 3 81 2L 2229747 2229769 TCTACTCTTCGATATGACGACAC 59 2229805 2229892 CACAGAATCTTGGATCTTCTTCAC 59 NA Drosophila melanogaster 61 Atg4 FBgn0031298 FBtr0077953 1 1 1 86 2L 1082048 1082129 ATGACGTATATGCGTCGTG 57 1082179 1082197 TAATGTCTGTGATGCCCAG 57 NA Drosophila melanogaster 61 ebi FBgn0023444 FBtr0078055 2 1 1 107 2L 416696 416792 TCTCTGGACTGGAATTGCG 59 416861 416881 GTGTTGTCCCAAAGTAGAAGC 59 NA Drosophila melanogaster 61 Pi3K21B FBgn0020622 FBtr0078132 1 1 1 102 2L 299906 302031 ACAAGTACATTGAGCGCCT 59 302095 302115 ACTGTCTCATAAAGTTGCTGC 59 NA Drosophila melanogaster 61 CG11592 FBgn0025686 FBtr0078134 3 1 1 60 2L 288623 288641 CTCCTGTGAGAGCGATGAG 59 288581 288601 GAACCATTTACTCGACTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpp30 FBgn0022246 FBtr0078143 3 1 1 80 2L 252028 252046 AGGACAAGCTGAGAATCCT 58 251912 251984 TATGGGAGACACTCATCGC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 3 5 5 110 2L 155731 155750 ATCTCCGACTTTCAGGAGTG 59 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 3 2 2 84 2L 253375 253459 CTCTTCCATCACATCATGAATATCC 59 253315 253333 CTTGGAATTGCACGAGCTG 59 NA Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 3 1 1 101 2L 272614 272632 CCTGAAGACGACAAGAAGG 57 272483 272501 CTGACACTGGAAGGAGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 2 4 5 96 2L 344410 344428 AAATCCAGTCCGCTAGAGG 58 344484 344571 GCGGAGAAAGACAATTAAGACTC 59 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010,FBtr0077917 2 2 2 174 2L 1586997 1587017 AAGGAACTCATAGATGTTGCC 58 1586780 1586861 CCAAGGTCAGTAAACTGCT 57 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301066 1 1 3 115 2L 2024159 2024177 ATCCATGCTAGTTAGCCAC 57 2024254 2026776 AGGAGATTCCCATTGATTCAC 57 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 3 3 3 80 2L 2040349 2040429 TCACAGTGCTGATTACACC 57 2040473 2040491 CAAGCATGGCATCTTTACG 57 NA Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 1 1 1 60 2L 2240343 2240361 AGAAGGAAACTGTACGCAC 57 2240229 2240249 CGAATTCTGAGTTATCAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 1 4 4 80 2L 2495423 2495442 TGATAACGCTGGAGTTTCAG 58 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 2 2 4 86 2L 2793385 2793405 AGAACCAAAGATGGAAAGGGT 59 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 1 1 1 60 2L 2848431 2848449 GGAAGTTCCTCGCCTACAG 59 2848531 2848550 GATACCGCATAGTTGGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 3 6 6 91 2L 3070721 3070830 AAGGAGAAGGAAATCCAGC 57 3070648 3070666 TCTTTGTCATACGTCAGCC 57 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0077663 1 1 6 153 2L 3108858 3112107 AACATCGGTGAAAGGTGGA 59 3098064 3108741 TCGCAATTGAGTGTTTGCC 59 NA Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 2 1 1 96 2L 3693801 3693820 CAAGCAATTCTTTGGCTCTG 58 3693655 3693673 GCATCATAAGACCAGCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 3 1 1 110 2L 3693816 3693834 TTTCATCGCTCTTGCAAGC 59 3693655 3693673 GCATCATAAGACCAGCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 3 4 4 81 2L 3780567 3781913 TGAGGGATCACAGGTATATTCAC 59 3781953 3781972 GTTCTCGATTGGCAGAATCC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 2 8 9 85 2L 3879058 3884044 AGTTCGAAGGTCAAATGCT 57 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 2 5 6 82 2L 4192684 4192705 GAACCTTAAAGACAACAACCAC 58 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 2 6 6 103 2L 4909614 4909686 ATTCTATGGGTTTCCGCTG 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 2 11 11 97 2L 4994704 4994794 CCCTTTAAGGATTACCTGGAG 57 4994627 4994648 GAGATGAAGCCATTGATATGTG 57 NA Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 2 2 2 60 2L 5039691 5039709 TCTACAAGGATGGCAAGTG 57 5039733 5039819 GGCTCATCAATCTGATCCA 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 1 3 3 98 2L 5307905 5308033 TTCTAACTTGCATCCGTTGTC 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 1 3 3 80 2L 5769935 5770022 GGCACCCAGAGTATTTCCA 59 5769873 5769892 TCCTGTAGCTCTGTCTTGTC 58 NA Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 2 2 2 81 2L 5850189 5850207 GTATGGAGCGCTACTTTGC 59 5850251 5850841 ACAATGACCATCCTCAGACG 59 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0079224 2 1 2 95 2L 6032921 6033334 GAGAAATGGCTGTGAGCAC 59 6032844 6032862 CGCTCGATGATTGGTATGC 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 3 3 3 118 2L 6095044 6095062 GCTAACTACGATGACACCC 57 6095143 6095246 AGAGCGGATTCATATTTGGG 57 NA Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 1 2 2 96 2L 6674206 6674225 ACTGAAACTAGTGGAACCAC 57 6674356 6674374 GTCGATCCAATACCGATGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 2 2 2 83 2L 7392132 7392150 ATTTACACCTGCCAAACCA 57 7392011 7392087 ATCTAGTTCTTGTAGCTGACC 57 NA Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079444 3 1 2 81 2L 7427293 7427311 GACGGGAAATGTGGTTGTG 59 7427354 7428059 GTTAAGTTTCGACCTGATGCT 58 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079459 3 1 5 101 2L 7459996 7460014 GCAACATTCGGTTGTCTCC 59 7455745 7459932 GCTAGGTTCTTCAACACCTG 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605,FBtr0112603 3 2 4 149 2L 7501515 7536282 TTTCTCAGAACCACCATCG 57 7501384 7501402 TCGAGTGATTCATCGAGTG 57 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 3 2 2 83 2L 7712057 7712075 TCTTCAAGAAGGTGCCCTG 59 7712121 7712195 TTTGCTTTCCCATGTCAGAC 58 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 1 2 2 134 2L 7800620 7800639 CTATTGGAGATAGAGGCCCT 57 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079625 2 1 9 83 2L 8228547 8228565 ACCGACGTAGTCATACCCT 59 8228246 8228500 TTTCCACGTGCTTTCTCCA 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 2 4 4 120 2L 8536961 8536979 CATACAACCGACATCGGTG 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301039 3 1 4 114 2L 9135281 9135299 GAACAATGACATCAACGCC 57 9135377 9154669 AGCAAGGATTGCATATCGG 58 NA Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 2 2 2 80 2L 9611432 9611451 CAAGGTTCTTAAGCGTCCTG 59 9611493 9611571 TTGCCACAGGCATTATACTG 58 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 1 3 3 80 2L 9911765 9912137 CTTTGACACAATGGCCATCC 59 9911704 9911723 TTCTCCCTTAGGTATCGCAC 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 3 2 2 136 2L 9940471 9940490 TAACCGCAGAACAGACTCTG 59 9940648 9940667 GAGTTCCTTTGCATTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 4 7 80 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256495 10257402 ATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080075 1 1 3 81 2L 10278584 10278656 CTGGATAGTCGATACTACGGC 59 10278523 10278541 TGATGGTCTGCTGAACGAG 59 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 2 5 5 80 2L 10296849 10296947 GTTTCTAAAGCTAAGCTCGGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 1 2 2 83 2L 10365673 10365783 GCATTCAGATTCATGCTGGAG 59 10365828 10365846 GTGAAGCAGTTGGAACACG 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 1 5 5 80 2L 10993660 10993748 AAGACCGGAATGAGTATGTG 57 10993790 10993809 CATCCTCGGCTATGATAAGG 57 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 5 6 101 2L 11835159 11835177 CGAATATGTCGTTCACCGC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 5 6 103 2L 11835160 11835179 CTCGAATATGTCGTTCACCG 58 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 3 2 2 84 2L 12131338 12131357 CGCCTACTGACCTATATGCT 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 3 3 4 82 2L 12407461 12407564 ACTTCCACCATTAAGGTTGTC 58 12407399 12407417 ACCTTAAAGACGCTGTTGC 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080441 3 1 4 118 2L 13208766 13209480 TCGAGAAAGAAGGTTCTTCGA 59 13209558 13209578 TGACTTTCCATCACTGAACTG 58 NA Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514,FBtr0080513 3 2 2 106 2L 13535018 13546920 CCTCTTAAAGGCTGCATGG 58 13534930 13534948 GGAACAACAGCCAAATGCT 59 NA InUTR Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 1 1 1 84 2L 15616153 15616171 TATAGATGGCCCAATCGCA 58 15616034 15616052 GAATAGCGCTCACGATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 2 1 1 60 2L 16336301 16336322 AATCACATGAATAGGAGATCCC 57 16336202 16336223 CATTACCATCAGATCGTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 3 1 1 61 2L 16337763 16337781 CACTGCTCAGCAAATCCTC 58 16337444 16337462 CACTTAATGCCCGGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 1 3 3 90 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451920 16452205 CATCATAGTACCAGCTGGAG 57 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 1 3 4 80 2L 16692116 16696595 ATCGAATAGAACCAGACGTG 57 16696638 16696656 GGTAATTGAGTCCGGACAG 57 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938 2 1 2 80 2L 16702251 16728201 CGAATATGGATCCTCGTATACC 57 16702192 16702211 CACATTGGGAACAATTGTGG 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442 1 8 10 105 2L 17394485 17400408 TTATACAGATAACAGCAGCGC 58 17400475 17400493 AATGAAGGCAATCTGTCCG 58 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 1 4 5 93 2L 17437485 17437503 CTTCACCATGCACAACCTG 59 17437315 17437431 CTGATTGTGCAGATGATTTGTG 58 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 2 4 4 108 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856751 18856771 ACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081212 3 1 6 177 2L 19410627 19416415 CGATGCTCTATTAGCCGAC 58 19410402 19410486 GTGCTCTTGATACACCTGG 57 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 1 2 5 80 2L 21618106 21618511 GCATTTCAATAGCAATGCCAC 59 21618046 21618065 CAGGGCCCAGTTAGATAGTC 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 2 2 6 193 2L 22737572 22741957 ATACGAGATTGAGACGGCAG 59 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 3 3 3 83 2L 22820433 22820454 AAGGATATTGTGGTAGCTAGTC 57 22820495 22831524 CATTGCCTCCTCAAATTTACTG 58 NA Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319 1 1 2 129 2L 11958661 11961939 GTATGCCATAAGACAAATGCCA 59 11958553 11958571 CAACCCAAACAGGAAACGG 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0086040 2 1 6 101 2R 1590899 1590983 AAACAAGTCACCGACACCA 59 1591048 1591066 AAATTCCCGCTACTGTCGT 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 3 4 4 90 2R 1595875 1596127 CCGCTAACATAGATCTCAACAC 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 3 2 2 80 2R 1898045 1898127 GAAATCTGGTACAATGGACCC 58 1898169 1898187 TGTATAAGCTTGGTGTGGC 57 NA Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 2 2 2 109 2R 1907039 1907116 GAACGATATGCCAAAGAAGGAG 59 1907186 1907204 CAATCGCGTTCCACTTTCC 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 1 2 59 92 2R 3236476 3245111 CAATGCCGTTCTTTAGATGGT 59 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111089,FBtr0111077 1 3 59 80 2R 3219878 3223231 GAACGTCTACGTACCTCCC 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476 1 1 8 127 2R 3357326 3357347 CTGCTACATTGACAAATCTGTG 58 3357009 3357239 TCGTAGTTACCTCCTTGGAG 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917 3 1 6 91 2R 3525796 3525814 ACTTTGGGCCTAGTCACTG 59 3525868 3526112 GCCGGCAGATCTAATTTCAC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 1 2 6 143 2R 3517705 3517723 CTACATCTGCCTCATGGAG 57 3517830 3521735 TTATTGGCTAGTTTGCCCA 57 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 1 2 5 85 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575727 3575747 CTTTCGTCTCCAATTTGACCA 58 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 1 2 4 121 2R 3873199 3873217 TGACATTGATCTTTGGCCG 58 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 2 2 2 117 2R 4278942 4279017 GTATAAACAGGCTGAATGCCTC 59 4279095 4279113 GGACCAGGTGAATCATCCC 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 2 9 9 80 2R 4568218 4568302 TCATGGACTACCGTGATATGAC 59 4568342 4568361 CTTCCCAGTTGACTAGACGG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0100426 3 1 9 80 2R 4553807 4563986 CGTATTGTGTAATGGACAGC 57 4564027 4564047 TGATGATGTCGTAGACAAAGG 57 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 3 4 5 95 2R 4788973 4788991 TTTAGCCCGTAGAGTTCGA 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 1 2 2 80 2R 4909359 4909483 ATAACATTGCTTTCAGGGACC 58 4909299 4909317 GCAGACTGTAGTCATTGCG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 2 2 4 175 2R 5120058 5120076 CTATGCAAGATCCGTTGCG 59 5118140 5119257 TCCCATCCCACATTCACTG 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299846,FBtr0300527 2 2 5 109 2R 5362613 5362631 CATGACAGCTATGCTCTGG 58 5362704 5362826 GTAGATACCTCGCAAAGGG 57 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 1 2 2 81 2R 5608218 5608239 CAGAAGTTGTGAACTTTGACTG 58 5607468 5608176 CCTGAGATGAGCACATAGC 57 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 2 2 4 103 2R 5782187 5782265 CCGAAGAGAAACCAATAGCTG 59 5782329 5782348 GGATACAGGGTATGGTGGAC 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 1 4 5 82 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949138 TTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993884 5993903 TGGCCCTTAACTTCTCAGTC 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301965 2 1 17 80 2R 6187705 6187723 GCAATCAGAAGTCCAAGGA 57 6187764 6192113 GATTGGGAGACTCTTTAAAGGT 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089365 3 1 26 117 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6375917 6419549 TATCCACGGTAATCACTTGGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089352 3 1 26 160 2R 6419733 6419751 ACATGACAATGGAGGAGCT 58 6413354 6419548 CAATTCGAGCAGACCTTGG 58 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088101 2 1 4 90 2R 7062302 7077855 GTCGAGGCAAATCTACTGTG 58 7095756 7095774 TGTGACGTATTTGCAGTGG 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 3 4 4 105 2R 7269386 7269467 CCGATAAGGTTGATCACGG 58 7269299 7269317 TCCGTGTATGTAACGTCGA 58 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 1 4 4 270 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393725 7394162 GAACTCGTGCTTCAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 3 4 4 273 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394165 GTTGAACTCGTGCTTCAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 3 2 2 105 2R 7540579 7565721 TCAAGTTATGGATTCCTGCCT 59 7540494 7540512 GTGAAAGGAGTGGTTGCAC 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 1 2 4 113 2R 7784184 7784205 GGAGTCTGGATAGTTAGCTACC 59 7784029 7784111 ACGACAAATCTCGATTGCAC 59 NA Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 2 2 2 89 2R 8034897 8034916 ATGAAGAGGAGAACCAGGAG 58 8034689 8034845 TATCCGATTCATCCTCGCC 59 NA Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987 3 1 2 91 2R 8062451 8062469 CGTTCGACGAATATGGTCG 58 8062524 8063250 AATGTGCGTCTTTATGGCA 58 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087897 1 1 2 80 2R 8220165 8220184 GAGCATAATACTGCAGCCAC 59 8220227 8220313 GGCACAATAATGGGCTGAG 59 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909 3 1 2 84 2R 8255911 8256259 CTAATGAAGGCAAGTCTGGA 57 8256305 8256324 GGGAAATAACCTTGTAGCGA 57 NA Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 1 2 2 80 2R 8447316 8447401 AGTGTACTATTCCGAGAACGA 58 8447443 8447461 CGCAACTCGGTAAGAACTG 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087876,FBtr0300390,FBtr0087877,FBtr0301490 1 4 8 200 2R 8560839 8563642 ATAATGCCAAGCTCCATCG 58 8560657 8560678 CGTAGTTATTTAGCTTGTGCAC 58 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 3 4 4 136 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 1 3 6 80 2R 8766206 8766566 CAATACCAAGATCCCAACCA 57 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 1 3 3 100 2R 8822744 8822762 ATAGACAGTATCCGGGTGC 58 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 2 2 2 64 2R 9134724 9134742 TACCAACACCATCTTCGCT 59 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33470 FBgn0053470 FBtr0087657,FBtr0087656 1 2 2 60 2R 9299580 9299600 CGTTTGTTAACCGAAAGAACG 58 9299681 9299699 AAATTGGGACCACTGATGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0087703 3 5 6 82 2R 9327821 9327904 GTCAGAGGAATCTACATCACC 57 9327759 9327777 GATCTACCTTGGCACAGTC 57 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388 2 1 2 84 2R 9397223 9397304 TACTTGACCGATTCCCTAGAC 58 9397350 9397368 AACTCTTCTCCGACGTTGG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 3 3 8 105 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065445 10065463 CAACTTTAGGTTGGGTGCT 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 2 4 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 2 4 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 3 2 2 143 2R 10638486 10638657 GAAAGCTGGCTATTACCTATTCG 59 10638365 10638383 CCTGCACAATCACATCCTC 58 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087413 1 1 2 83 2R 10927482 10927500 ACAAATCTCAGAGCGAAGC 58 10927547 10927652 GAACATCCGCCTTGTAGAC 58 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0300575 1 1 3 80 2R 12001319 12001337 AGATTGACGATTGCCACTG 58 12001380 12001550 CTCGGAATATTCATCGTCCA 57 NA Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231,FBtr0087232 3 2 2 106 2R 12027845 12027863 AGATGCTGGAGTTCCTTGG 59 12027933 12028013 TTTCGAGTCCAGTCACTGG 59 NA Nonspecific Drosophila melanogaster 61 mrj FBgn0034091 FBtr0113084 1 1 5 106 2R 12093077 12093224 CTTTCCGATGCACGTAAGC 59 12092989 12093007 CGATAGCGGGTATAGGAGC 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 1 5 5 82 2R 12093319 12093420 TGAAGTGAAGAAGGCATATCG 58 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 1 4 4 91 2R 12416663 12416686 CACTGATCTGTATAATACTTCGGC 59 12416735 12416872 AGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 1 3 3 80 2R 12454482 12455295 GTTCGAATTGGAGAAGATCCAG 59 12455335 12455354 AGAATCTTCCCGAACCATCC 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 2 3 4 83 2R 12645897 12646764 AAGTTACGGCAACGTTTGG 59 12645832 12645853 CACATTATAGTCCGGTGAAGTG 59 NA Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 3 1 1 83 2R 12665988 12666006 CAATGTGCGACGTTAACGA 59 12666106 12666126 TTATGTTACCCAGACCAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 1 7 9 80 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958998 12959240 TTGAGCTTGAGTGTTATCACTG 58 NA Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 2 2 2 115 2R 12976596 12976615 CTACTTCAGTGATTGCCCTG 58 12976441 12976518 CAGGTGGATACCAGATGGA 58 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 1 2 3 80 2R 13359057 13359075 CAACAATGTCTTGGGTGGC 59 13359118 13359207 TGTGAGCTCCTATAGCTGTG 59 NA Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 3 2 2 81 2R 13378859 13378936 CCGGATGCTATATCCTTGG 57 13378981 13378999 GAAAGGTGACCTCGTTGAG 58 NA Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 2 1 1 150 2R 13479587 13479605 GAACTACGACAAAGTGCCG 59 13479391 13479409 CTACGTGCTTTCCTTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092 2 1 2 91 2R 13984490 13984556 AACGTAAGACCCATGCCTC 59 13984607 13984629 CGTCTGTGGTCCATTATATTTGG 59 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 3 5 5 108 2R 14043478 14043496 GATGTCGTCGGATCAACAG 58 14042988 14043409 GAGTGTTACATCTGTGAAGCTC 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086688,FBtr0086684,FBtr0086687,FBtr0086689,FBtr0086686 1 5 8 191 2R 14309051 14311643 GGAGGACCATAATACAGCCA 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 2 3 8 82 2R 14311923 14311941 CATCACCGTCTGGAAGGAG 59 14311986 14312390 CAGTGCGTTGGTATACAGTG 59 NA Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 1 2 2 101 2R 14682647 14682665 ATGCGGGTACACTAATGGG 59 14682502 14682582 CCGGATTTGTCTCATCCCA 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 3 2 3 198 2R 14892378 14893301 CTAGCATCAAGGTACAGCG 58 14893463 14893481 TGTTCTTCAAGTACCGTGC 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 2 8 12 84 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064243 15064808 CCGGAAATGACGTTAGTTCC 59 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 2 3 3 91 2R 15280207 15280225 GACTATTGTGAGCGCTGAG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0301610 2 1 6 80 2R 15425713 15433532 GTTATGCTTGAGAGCCAACC 59 15425652 15425670 GGTGGTGTGATATTCGGGA 59 NA Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 1 1 1 81 2R 16757934 16757952 ACTGTCTGAAGATCTGCGG 59 16758061 16758079 GCATGAATGACTTGGGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 3 7 15 131 2R 16910969 16910987 CCACTAGACAAGCAGAACC 57 16911081 16911489 CAATTTGGACGTCAGTTCCT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 3 6 15 95 2R 16907280 16907298 CTGAATGCCACGAAGAAGG 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 2 1 1 208 2R 16947836 16947855 CCGCAGAGTACTACAAACTG 58 16947590 16947608 TCTATCCGGCTGATTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 3 3 3 115 2R 17069256 17069349 GTAGAGGGAGTCCACATGTG 59 17069427 17069445 AATTCCTCACGGGTCTTGG 59 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 3 3 3 138 2R 17181653 17181740 AGTCCACTCTGGGTATGGA 59 17181842 17181860 AGAGTAACAGGCTTTGGCT 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 1 2 8 134 2R 17185985 17191401 CCAGCCAGAACATAAATCGC 59 17191495 17191516 GATCATCGATGGTAAGATGTCG 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 3 4 5 180 2R 17202255 17202336 CCGGTATCTGGAAAGACCC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680 2 1 2 73 2R 17557186 17557267 TCTGACCAAGAATCACTACCA 58 17557133 17557151 ACTTTAAACAGCACTGGCG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 1 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0071839 3 1 2 95 2R 18363684 18363987 CCGGATTGACAATATGGGAC 58 18363608 18363626 GATCCCACTTCAGTGTTCC 57 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273316 2 1 5 84 2R 18599850 18599925 ATTTCGGCACTTTCACGTC 59 18599973 18599991 CGATGTAGCGCTTGTTCAG 59 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290095 1 1 3 80 2R 18764805 18764827 CTCGTTCTATGCTCAAAGATTCC 59 18764867 18765280 ATCTCTGGGAGATCCAGGG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 2 4 13 84 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 1 1 1 160 2R 19492025 19492043 TGGAGTTCCTGATCACCTG 58 19491547 19491566 GACTGGATTCATACTAGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 3 3 3 81 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619490 19619574 ACATCGTTGTACAATCCGTC 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072139 1 2 4 83 2R 19810488 19810507 TGATGGAACAGCGTAATCAG 58 19810550 19811543 GGTCTACAATTGTTTGAACCAC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072215 2 1 8 102 2R 19816907 19816929 CTGCAGAAGAATGGATAACTGTG 59 19814695 19816845 ACATCAGGAACATCTGCGA 59 NA Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 3 2 2 82 2R 19946584 19946603 AGACTTGAAGGTTCCAGAGG 59 19946648 19946728 GAACGGTGCACAGTAAGTC 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 1 6 6 80 2R 20287859 20287947 AGAAGTCCTTAGTCAAAGATCC 57 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 2 3 5 101 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235421 235440 ATATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 2 10 10 80 3L 302294 302370 TGTGATGGTTACCTGCCAG 59 302411 302432 TATGTTGGAGAAGATAAGCCGA 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 3 2 4 126 3L 452934 452955 TGCGATCTTCTATTTCAAGCAC 59 451763 452847 TTTCAGTATGTCGCCTCCA 58 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 1 1 2 247 3L 711822 711841 TACCTTTCTCTTACGCCGTC 59 711535 711554 CGATATCTGTCATTCCCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123,FBtr0072807,FBtr0072806,FBtr0100219 2 4 5 64 3L 1664553 1664571 TCAAGTGCCTGGAATTGGA 59 1663997 1664015 CGACTTAATTTCCTCCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 1 2 4 106 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857 2 1 4 98 3L 2119118 2125246 TCAATACGATCAAGGCACTC 57 2119039 2119058 TTATTGACGCCATTACCCAG 58 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072909 3 1 2 173 3L 2235962 2236057 CCATACAGGTGAACGAAGC 58 2235807 2235825 GCCTAGACCATGAAGAACG 58 NA Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 2 2 2 88 3L 2593243 2593266 CGCGTAGTCATAATAACATAGGTC 59 2593313 2593399 GGCCAATTGTTGCAGACTC 59 NA Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 1 3 3 82 3L 2724738 2728436 GGACAAGAATAAGGAATCGCTC 59 2724677 2724695 ATGGTATGATGCCCTGCTC 59 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 3 5 5 88 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131024 3131119 TCTGGTTGAGAGTCGATATTATGG 60 NA Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 1 2 2 100 3L 3185486 3185504 GATTCGATATTTGGCGGCC 59 3185567 3185642 ATGGAACTCCGTCATAGCAG 59 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 2 4 13 81 3L 3516815 3552793 AAATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073269 3 1 6 115 3L 4131209 4131227 TATATCGAACGTAGCGGGC 59 4129783 4131131 CGCTATCTTCATCTTGTCGG 58 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302565 2 1 3 134 3L 4195131 4195151 TCGGTTCATGTGGAAATTGTC 59 4195381 4195852 CATACCATTGCGCTGTGAG 59 NA Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 2 2 2 94 3L 4402148 4402235 GCATGAAACCTATTTGCTCC 57 4402292 4402310 GAAACGTCCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 3 2 2 131 3L 5755792 5755810 ATTGTGGCGCAGTTTAAGC 59 5755616 5755697 GAGCAGAGTCTTGAGCTCC 59 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 3 2 2 88 3L 6117828 6117914 TGTACCCTCAAATGGTGGA 58 6117758 6117776 CTCCTGCACCGATAATACC 57 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149 3 1 2 93 3L 6173886 6173958 TGCAGGAAAGGTTTCACCA 59 6173811 6173829 CATCGACATTGCAGGAGTG 59 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 3 4 4 80 3L 6685396 6685485 CTTCGTAATAACCGGTCTTACAG 59 6685338 6685359 TATTCCGAGAAGTTTAGACCCA 58 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 2 2 2 80 3L 6708856 6708874 GTTCTCGCAGGAGATTGGA 59 6708455 6708813 GTGAACCAGTATACCGTGGA 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 1 6 11 80 3L 7005318 7005337 CATTGGCAATGATTTGCACG 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851 1 1 3 100 3L 7626705 7628793 CCAACTATGTCACCTCATGGA 59 7628855 7628873 TTCCTGAGTCCTCAACTGC 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076780 1 1 7 160 3L 7823616 7823636 GCAACAATAGTGGCAATAGCA 59 7813119 7823494 AGATTTCCTGCCTGAGCTG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076773,FBtr0076774 2 2 5 137 3L 7895364 7896303 TGGAAACTCATTCTGGGACC 59 7895246 7895264 ATCCTTCTTGCGTATGCCT 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 3 2 4 155 3L 7926881 7928485 CGGAGAAGAATGAACAGGT 57 7926208 7926226 GATAGGAGGCATCTAGGCA 58 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 1 5 5 194 3L 8349036 8349116 ACTGCCTATAGAAGCTCGC 59 8348860 8348878 GAACTGGATATGCTCGCAG 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302584 3 1 5 112 3L 8790224 8790246 GATGAGATACTGGAATCTCTGGT 59 8790318 8790799 CTGCGCTTCAATGATTTGC 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491 2 1 6 98 3L 9338147 9338165 TCGGAAAGACGTTGAACCA 59 9340742 9340760 CACCACCAATGTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076460 3 1 5 119 3L 9423834 9423852 GCTCGAACCGAAATTGGAG 59 9423934 9428973 TTTAAAGCTGTAGTCGCCTG 58 NA InUTR Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 1 3 4 171 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856556 9856574 GATCTCATAGACGGCTCGT 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 1 2 4 94 3L 9894108 9894450 TTCGCTTAAGAATCCCGAG 57 9894508 9894526 TTCTTAACATGTCGGCCAC 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 2 2 4 95 3L 9894107 9894450 ATTCGCTTAAGAATCCCGAG 57 9894508 9894526 TTCTTAACATGTCGGCCAC 58 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076290,FBtr0076289 2 2 5 106 3L 10561696 10564182 GCAACAGAAGACACAGTACG 59 10564251 10564269 CGGCATGTCCATTTGTCAG 59 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 1 4 4 80 3L 11600291 11600309 GGATACAAGCCCGAGATCC 59 11600169 11600250 ATCTTCAAACATGGTCTGTTCG 59 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300097 1 2 3 87 3L 11684200 11684218 CTTTACAGTTGTCCGCTGG 58 11684073 11684149 TGCCTACCGATCAATTCCC 59 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 1 2 3 172 3L 11730333 11730351 AAACATCTGCACTACCACG 58 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 1 2 6 64 3L 11811197 11811215 TGGTACACAGTCGACAAGG 59 11810716 11810734 ATATCATCGTTCACGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 1 2 4 93 3L 11872544 11872616 CCGATCCATTGCTCATGTG 59 11872670 11872691 GCACAAGCCATATCTAATTCCT 58 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 2 2 2 80 3L 11999278 11999599 AACTTTGAACAGATGCTCTCG 59 11999639 11999659 AATGGCTACATTTCCAAGCAC 59 NA Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 2 2 2 82 3L 12363092 12363110 GATGACGGAGGACTCACTC 59 12362376 12363048 GCGTAAACTCTCAATTTGCAG 58 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983 3 1 3 127 3L 12398255 12401224 GATATGATGGGACGGTACCTC 59 12398148 12398166 GAAACTGCTCCAGCTATGC 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 1 2 3 80 3L 12406596 12406614 CAGGATCGATATCCACGAC 57 12405543 12406552 TGCTGAAGGAATTTCTCCG 57 NA Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 2 2 2 140 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458138 12458156 GTTCTCGTATCTCCCAGGC 59 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 1 4 4 80 3L 12805309 12805389 GCTTTGCTCAATACGTATAAGC 58 12805429 12805448 CTCCCTTGGCTTAACATCAG 58 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 3 3 3 191 3L 12842191 12842272 CAACTCTTAATGCGGATGGC 59 12842019 12842037 CGAAGATCTCCCGGATCAC 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127 1 2 4 151 3L 13876428 13879190 GTGATTTGCCGGAATACGG 59 13867040 13867058 TTTATCGCCCAGCAATGTG 58 NA Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 3 2 2 91 3L 15128052 15128070 AATCATCTGCGAATGAGCA 57 15127562 15127997 GAACTGAGAACCACTTCGT 57 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 1 3 4 80 3L 15504256 15505276 AGCTCAAGGATCTGAGCAC 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 2 3 4 80 3L 16377075 16377096 TTTATCAAGCCCATAGACAAGC 58 16376956 16377038 GAAGATAAGTTGGGAGTAAAGCG 59 NA Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 1 2 2 81 3L 16652382 16652400 GTGTTCTACTACTGCGGCA 59 16644625 16652337 GCAATTGGAATCTAGGCCG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 1 2 4 86 3L 16785599 16785617 AAGAATGCCGGATTACCCT 58 16784781 16785549 AACAATCACACGTGATCGT 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 3 7 12 124 3L 16905419 16906331 TCGACTCCAAGGATCTGTC 58 16906417 16906437 TCCACAGTAGATCTTATCCGC 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 2 4 4 82 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391564 17391586 CAGAATGGAGTTAGAAAGGTCAG 59 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 2 2 2 142 3L 17548149 17548167 CAAAGACGACAGGATGGTG 58 17547969 17548044 GACTTGTGATCCGTATGAGC 58 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 1 3 3 80 3L 17873599 17873689 TCCTATAAATACGGGAATGCAG 57 17873729 17873748 GCCATGGTAGTCTCATTGAG 58 NA Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 3 2 2 80 3L 18796090 18796175 GTTGCTTAACAAGCTCTGTCC 59 18796030 18796050 TCTATCTTGAACTCCCGTAGC 59 NA Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990 1 1 2 93 3L 19254747 19254824 CTGAGATTTCAATCCGGATGC 59 19254879 19254897 TGAAGGGTGCTGGTTTAGG 59 NA InUTR Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 3 4 4 81 3L 19635043 19635061 GTTTGCAAACCTGCATCCA 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 2 4 4 81 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634304 19635000 CTTATAAGCAACACCCTTCACG 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 3 3 3 81 3L 19809756 19809834 AAAGGAGATTAAGCACCTCGT 59 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 2 2 3 111 3L 19881569 19881649 CTGAAGCCGAATAACGACG 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074916 1 1 2 120 3L 19912610 19913261 CTCCAAAGATGTGGAGCAG 58 19912508 19912526 ATTCATAACTCCCACGGCA 59 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 1 3 3 80 3L 19992279 19992404 AAGAGCATCTTCATATGGTACC 57 19992220 19992240 AATCATGCAGGAGTTCTTCTC 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302713,FBtr0302716 3 3 5 153 3L 20149087 20151587 CCAATGTGGTATCCAGTTCC 58 20148880 20148898 TGTGTAAAGCTGAGGTTCC 57 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 2 2 5 124 3L 20146360 20146378 CCAAGATGGGCATTATCGG 58 20145396 20146274 AGTATTGTTAGTGTGGCTGTG 58 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 1 5 5 143 3L 20381818 20381836 CTACTTCGAGCCCAAGGAC 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078203 1 2 5 151 3L 20503869 20505045 CAAGGCAGCAGTTAATTGCA 59 20505157 20505177 TGAGGAGACGGACTTTATTGG 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 3 4 4 82 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508473 20508551 TCAACCATAGCCCGAATCC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 3 3 3 183 3L 21428963 21428983 ACGTTTGTGATAAGACCTTCC 58 21429191 21429209 TGCTTCTTGCAGATGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 1 3 3 80 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612186 21612208 GGATGAATCCATCTTTGTACTCG 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 1 3 5 131 3L 21914316 21914334 TGATCCGGATCTCCAACTG 58 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078532 2 1 5 143 3L 22768458 22770215 TCATTGAGGAACAGACGGG 59 22770322 22770340 GATACTTGGCCTCTGTCCA 58 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 3 3 3 81 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885715 22885734 TGTATGCTAACAGGGTTCCG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952 3 1 4 141 3R 163060 165102 GATACCACGACCAGAAAGC 58 162937 162955 TTCCCATCTCTTCTAGGGC 58 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 2 2 2 89 3R 225228 225246 CAACTTCCTGTGGGTTCCA 59 225097 225176 ATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 6 10 105 3R 569891 570196 CGATATGGATACTCAACTGAAATCC 59 569810 569830 CTCTAACTCCGATCGATCTCC 59 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823 2 1 2 101 3R 1077214 1077232 ACAGTTGCGCTTGTATTGC 59 1069962 1077149 TGAAGATTCCGTGCTCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0273434 2 1 19 158 3R 1125285 1138718 AAGAACAGGAGCAAATCGC 58 1124165 1124183 CACGGTGTAGGAAATGGTG 58 NA Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 2 2 2 85 3R 1375372 1375390 ACTCCGGAAACATAATGGC 57 1374901 1375326 GTTGTAAACACCAATGACTCTG 58 NA Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 3 2 2 86 3R 1375372 1375391 TACTCCGGAAACATAATGGC 57 1374901 1375326 GTTGTAAACACCAATGACTCTG 58 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 1 3 4 80 3R 1388740 1388758 CCCAGAAACCAACTGTCTC 58 1388608 1388698 GGTGTTGATCTCAACTTTGGT 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 2 4 4 134 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644079 1644097 ATATCTTGCGTTTGGTGGT 57 NA Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 1 2 2 81 3R 1651095 1651114 CTGAAGATGCTCATTCGCAG 59 1651158 1651230 TAGCGATTCATGCGATCCA 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 2 4 5 82 3R 2582673 2583203 ACGCTACAGATCTTGGAGC 59 2582609 2582628 CTTATTCCGGTGCTCATGTC 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 2 7 11 119 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734451 2734603 TCTGATGGACCTCTGTCAC 58 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 1 2 3 80 3R 2888222 2888306 TGCCAGGAAGGTACTTGTG 59 2888350 2888368 CTTCTCCAGGTCTTCCAGG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 2 8 9 90 3R 2926913 2926936 GAAGATCAGCTATGAGAAACAGAC 59 2925232 2926864 CAGATCAAGCGTTCTGCTG 59 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 2 2 4 179 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118150 3120143 CAGAAAGTGACCTTTCTGCAG 59 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 1 2 2 80 3R 3745624 3745645 CTCTGGTGAAATTAACAACTGG 57 3745505 3745586 CTTTCATTGTCGGCATATTCAC 58 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 1 1 2 80 3R 3826693 3826712 AAACCGAGTTAAAGGTTCCA 57 3826585 3826651 TATCGCTGAATTGTACCGTG 58 NA Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 1 2 2 91 3R 3979043 3979061 CACAACCACAACCCTTTGG 59 3975446 3978990 GACGATTGACATTGTGAAGCT 59 NA Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 2 2 2 76 3R 4171065 4171083 ATTCCTGTTCTTAGGGCGA 58 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 2 2 2 60 3R 4576502 4576522 GAGTGATGTATTTACTGGCGG 59 4576396 4576417 TTGAAGTGAATGATCATGAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0082064 2 2 4 80 3R 5347456 5347537 TCGCAGACTCTTGACAAGG 59 5347581 5347599 CTCTAGCTTCTCGGCATCC 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 3 2 4 100 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515508 5515528 ATAGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 2 1 1 64 3R 5642489 5642507 ACAACATCGGACAAGTCCT 59 5642371 5642390 CACGAATAACAGATGGATGC 57 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 1 9 9 80 3R 5845147 5845240 TTATCAATCGCTATCGTCCTG 57 5845087 5845105 ATGACAGCTCATTGCACTC 58 NA Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 2 2 2 132 3R 5947595 5947613 CTTTACCAATCGTGTGCGA 58 5947761 5947785 TGGATATAGGTAATACCCAGATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 2 3 4 85 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122529 TTTCAGGGTAATCGAAGCC 57 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0302571 1 1 4 102 3R 6589661 6589842 CAAATGCATACAGGCCAGTC 59 6589907 6589925 TCGATGGGCTAACCATCTG 59 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 2 3 3 125 3R 7504586 7504676 AGAACACTCCCATGCTTACC 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 2 4 4 73 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646922 7646941 TATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 2 3 3 100 3R 7792837 7792917 GATGCAATCCCTGAATGCC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 1 2 2 177 3R 8175695 8175925 CTAGCCAACCAAATCCCAG 58 8175536 8175555 CTTTAACGTATCCACTGCCA 58 NA Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 3 2 2 165 3R 8545129 8545147 TCTTGGACAAGCGCTACTC 59 8540712 8540733 TACATGTACTTGTCCAGATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 3 2 5 150 3R 9582375 9582913 TCAGATCAGGAATCGCCTG 59 9583027 9583045 CTTGACCATGTTGTCCACC 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 1 5 5 80 3R 9795380 9795400 GATTCATATACACGGGCAAGG 59 9795252 9795340 CGAGTGCATACTTATCAGCAG 59 NA Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889,FBtr0082888 2 2 2 60 3R 9917076 9917094 CTTTGATCGGCTTCACGTC 59 9917118 9917543 GCCTTCGATTTGGATTTCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 1 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 2 3 13 145 3R 11121256 11125839 AATACGAAGAGGTGGCCAG 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089959 2 1 13 99 3R 11126777 11126795 CAACACCCGTCTAAAGGAG 57 11128937 11130910 GATCATCTCGTCTTCGAGC 57 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083080 2 1 3 97 3R 11138922 11138940 CCATCAAGTTGAAGGAGGC 58 11139001 11139323 GAAGAGACGGTCCTCTAGC 59 NA Drosophila melanogaster 61 CG14867 FBgn0038333 FBtr0083095 1 1 1 80 3R 11207279 11207297 AGAATCTGCAGTCGAGAGC 59 11207400 11207418 GTTCGATTTGCAGCTCCTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 1 2 2 91 3R 11660726 11660745 GTGCGAATATTGAGAGCGAC 59 11660799 11660927 CACGTCGGACTTGATTTCG 59 NA Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 2 2 2 80 3R 12187839 12187916 CAATCTCCTAATTGGTCAGCG 59 12187779 12187797 AGAAGATCGGGTCTTGGAG 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 1 5 5 80 3R 12755406 12755425 AATGCGTATGTTTCCAAGCA 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 3 2 7 261 3R 14000711 14000729 TCTATTCTACACGCCACCC 58 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 1 1 1 201 3R 14046276 14046294 TCCAGAGTTCGACATTCCA 58 14045907 14045928 GGAAAGATTCACACTAATAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 2 3 3 115 3R 14204681 14204957 GCAGTGAAGGATGAGATCG 58 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775,FBtr0083684 2 2 2 80 3R 14562185 14562265 TCAAGTAGCAATGAATCCACC 58 14562125 14562143 GGATCCCTTACGCATATGG 57 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0083765,FBtr0110915 1 7 8 80 3R 15418838 15420234 CAACTCAAAGAACTCAAGTGG 57 15420276 15420294 GAGTCCTCCAGATCATCGT 58 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256 1 1 2 98 3R 15705943 15705961 TATCACTACGGCGTTAGGG 58 15706023 15706613 ACACGAGAGCTTGAGACTG 59 NA Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 3 2 2 82 3R 16479501 16479522 CTGCATTATTGCCCAATATAGC 58 16479278 16479459 TATTCTCACCCTGCGTACTC 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 3 2 8 81 3R 16576465 16580694 CGCTATGCTCATTCGATGG 59 16580737 16580757 CGTCCGATAGTCGATAATGGT 59 NA Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 2 1 1 95 3R 16569362 16569383 TCAGATGCTCAATATGCAAAGC 59 16569231 16569249 CGAATCTTGCCCTCAAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0302412 3 1 2 94 3R 16757051 16757069 AATCTGCGTTGTCATGCAG 59 16756577 16756995 GATGATGGTCTCAACCAAGTG 59 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0113257 1 1 2 89 3R 16753108 16753126 GGTACAACTGCTTCGAGGA 59 16753179 16754410 CGAGTTCAGCTTGCTTCAC 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 2 3 4 174 3R 16881620 16881700 GTTTGTTAATGGACTGGGCA 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089519 1 1 4 72 3R 16894678 16894696 TCTGGGTGACATCAAGGAG 58 16894732 16895043 TGTATCGCCCTTGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089519 3 1 4 73 3R 16894677 16894696 ATCTGGGTGACATCAAGGAG 59 16894732 16895043 TGTATCGCCCTTGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 3 2 2 80 3R 16940759 16940777 TTTCATAGAAACCTCGGCC 57 16940819 16940988 ACAATGCGATAGATCTCTGTG 58 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 2 3 3 101 3R 18217015 18217095 ATTGAGTGAATTCGGCGTC 58 18217156 18217178 CTGCTCAATACGGATGAATAGAC 59 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368 1 2 3 80 3R 18946207 18946226 TCTACAACAGCACTTTCTCG 58 18946269 18946349 TTGTTCATCTCCTGGAAGC 57 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 1 3 3 120 3R 19008675 19008693 CAGACACGTTTCAGTTCGC 59 19008777 19009178 TGGTGAAGATGTCCTGCAG 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089715 2 1 3 157 3R 19118391 19119580 TAGTTCAGGCTACAACACCAG 59 19118254 19118272 TGTTGCTTTGCTGTACAGC 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717 3 1 3 118 3R 19165904 19165922 TCTGTCCAGCCTAGTTGAG 58 19139272 19163628 TGGGAACTTCTAATGATGCC 57 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 3 3 4 144 3R 19432766 19433259 TCAAGCTGCTAGACTTCCA 58 19432640 19432658 ATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 3 4 4 82 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 3 4 5 80 3R 19802106 19802127 AAATCGGATAAATCGGAGAAGG 58 19802162 19802242 GAACACCTTGATCATCTCTATATCC 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084558 3 1 4 98 3R 20047636 20048077 CTGCTACTATGTGTTAATATGTCGG 59 20048133 20048151 TTCTTTGAATTGCGCACGA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100624,FBtr0301582,FBtr0301581 2 3 18 81 3R 20513555 20513574 GAAGCGTCACTATACCACAG 58 20513618 20517190 TTCATGAACCTTGACTCGC 58 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084699,FBtr0084700 1 2 3 91 3R 20646482 20646831 CAGATGAAGATCATGGAGTCC 58 20646882 20646902 TTACGATCAGTAACGTCTCCA 58 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 3 3 3 80 3R 20699677 20699837 CGGATGCTAAATACGTATGGG 58 20699617 20699637 AGTTGTCCAGTGGAATAAGGA 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 1 1 1 65 3R 21088561 21088579 AAAGGATGCAGGGAAAGGT 59 21088667 21088685 TTCTTCTCCTTACCGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 3 6 6 84 3R 21474760 21474778 CAAACAAGCGGTTCAAGGA 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 1 2 2 60 3R 21637229 21637250 AGTTATCCTCGCTTTCAAAGTC 58 21637268 21637289 CTCATTCTCGTGTATAAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 2 5 5 83 3R 21874083 21874101 AAATGGTTCGTTTCCACCG 59 21874146 21874228 TTCCTTCGACTGGAATATGCT 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302096 3 1 10 123 3R 22399485 22399588 GCATTATGACAACTTGGATGG 57 22399673 22399691 CTTAAAGGGTGTTGAGCCC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 2 2 10 86 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424359 22424377 GATCACATCTTGTGCCTCC 58 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 3 3 3 82 3R 22544515 22544533 AGTACTACTTCGCAGTGGA 57 22544575 22544652 GGACCAATCCTTATGCATATAGG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 2 12 12 160 3R 22891749 22891834 ATCGAAGAGTGCGAAGGAG 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 3 3 3 84 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758241 23758260 GTTGCAAACCTCGATCACAG 59 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 3 4 4 111 3R 24146990 24147103 ATGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 2 2 2 61 3R 24409375 24409393 GAGAACGGGTGCTATTTGC 59 24409332 24409351 CTAATGGCCTCCTTCTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 1 5 6 82 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639719 24640880 CGCTCAAACACCTTATAGCAG 59 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085354 3 1 3 109 3R 24652886 24653016 CAAACTGAAGACACTCAACAC 57 24652797 24652815 TATCCTTGACGAAGCACAC 57 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 3 2 4 84 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940207 24940227 CGTGGACTTTCAATTATGAGG 57 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 1 5 10 116 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 3 5 10 180 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24961001 24961025 CTGGAAGAAGATTATAAACACGGAC 60 NA Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 3 2 2 84 3R 25058455 25058473 GATATTTCTGTGCCGGTGC 59 25058518 25058594 TGCAGGAATTCTGTATGTAGGT 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 3 3 5 104 3R 25309373 25309391 ATTTGAACCTGCTGAAGCG 59 25309459 25309690 ATAGAGGAGCGACATTGCT 58 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540 3 1 3 127 3R 25574482 25574554 TAACGCAAGGGAATCTTCG 58 25574373 25574391 AAATCATCTTCAGGGTGGC 57 NA InUTR Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301745 3 1 2 140 3R 25662426 25662447 GGATACCTCAACTTTATGACCG 58 25662548 25662622 CGTCGATGGTTTCTTGCTC 59 NA Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548 3 1 3 185 3R 25823753 25823771 TCCTTCCAGCTCCTCTAGG 59 25823920 25824002 TTCTCCCTTTCTCGATGCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 2 3 3 80 3R 26184089 26184107 TTCGATCGCTATCCACTGG 59 26184149 26185703 GTATTTAACCTCGATGCAGCC 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 2 5 5 82 3R 26289004 26289024 ATCTGCTCTATGACATCTCCA 58 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 2 3 4 80 3R 27006535 27006772 ATATACCGAATGTCTACGTGAGG 59 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 2 6 6 85 3R 27553964 27554122 GGATGATCTAAATGAAAGTCGC 57 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 3 2 3 80 3R 27663681 27663703 CATCTGTATCAATCAGTAGTGGG 58 27663742 27665613 CAATTGATAGGGCTGTTGCA 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 3 2 2 95 3R 27815039 27815114 ATTCCTAAGACGGTGCCAC 59 27815172 27815191 TACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0089116 1 1 7 81 4 255557 257026 CGCCAATTAAGCCTAATGTC 57 257068 257088 GAATCATGGTCTGCTTTAGTG 57 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129 2 1 2 192 4 399150 399352 ATACATCGAAGCAGCATGC 58 398783 398802 CCATTGCCCGTAACTATCTG 58 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 3 6 7 83 4 470582 470875 TAAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 1 4 4 80 4 714052 714072 ATACCAACGATGAGGAGTACG 59 713455 714012 CATGAGGTTGAATTTCCTCGG 59 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 2 4 4 80 4 714052 714071 TACCAACGATGAGGAGTACG 59 713454 714011 ACATGAGGTTGAATTTCCTCG 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 2 4 4 80 4 714052 714071 TACCAACGATGAGGAGTACG 59 713454 714011 ACATGAGGTTGAATTTCCTCG 58 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0112904 2 1 3 118 4 948106 948124 GAATATCGTTGGCGTTAGC 57 947275 948025 CCGTTGATACATACTCTGCT 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 2 6 8 85 X 398749 398768 TCAAGAAGCAGTTCAATGGG 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 3 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 3 3 3 107 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237881 1237900 AAGCCCAAGTTCTCGTAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089814 2 1 2 186 X 1575670 1575688 TTCCTCAAAGAAGAGCCCG 59 1574132 1575441 GCCAGTTAAACTTGTCGGG 59 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 3 3 3 81 X 2243028 2243046 GTAAGCTCTTGTCCCTCGT 59 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0070451 2 1 8 81 X 2416440 2417446 AATCTAGTGATATCGAGGAAGAGG 59 2416382 2416400 CTGGAGTCATCGCTACCAG 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 2 12 12 80 X 3228354 3228595 CGTCGCTTAAGTTCAAACG 57 3228639 3228657 CGGAAATCTGATTTCCCGA 57 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 2 7 12 81 X 3215178 3215197 TATATCGCTCCGATTCGGAC 59 3215239 3219968 TCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 2 3 5 84 X 4248514 4248532 AGAACTTGCGTCTCATCAC 57 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 3 4 4 153 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598371 GAGTGTTCACATAGTTGATGGC 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0290088 2 1 5 80 X 5123366 5123386 GGATCATTCCTGAATCTGACC 58 5123427 5127453 ACAGAACAACTGTTTGAGCA 58 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 3 3 4 103 X 5794972 5794990 CGTCTAATCCAGAGACACC 57 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869 3 1 2 158 X 5956029 5956049 CTTATGGACGAATTCAAGCGG 59 5956169 5956884 CTGAGTGCGGAACTTTGAC 59 NA Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 3 2 2 81 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997043 5997062 GATTCCGCCGTAATTCAAGG 59 NA Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 1 2 2 60 X 6484257 6484276 ACTAGCCCATATCATCTTGC 57 6484361 6484382 GCTGCCTTGATTCATATTATCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0071042 3 1 2 83 X 6735555 6735574 TCATTTGCCTGGAGGATCTG 59 6734457 6735509 GGTCGATGCATCCTTTGTG 59 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 3 3 3 60 X 6772497 6772516 GAGCTCTACAAGGCAAATCG 59 6772600 6772619 TGTAGTTGCGATCGTACTCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 sws FBgn0003656 FBtr0071125 2 1 3 87 X 7854135 7855217 CACCAATGGATCTCTGTGG 57 7854066 7854084 GTGCCCATCTTTAGGATCG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 2 1 1 60 X 7966164 7966185 GAAATAAGCGAGATAGACGAGG 58 7966061 7966079 GCTGATCATTCGATGACCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 1 3 3 80 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071215,FBtr0071214 1 2 6 82 X 8478890 8478908 ATCATCTACTGCTACGGCG 59 8478954 8479858 GATTCCTCGAGCGAAACTG 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 1 4 6 92 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 3 4 6 117 X 9005030 9005126 CGAGCATGGATTTAATCCAGC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0112972 2 1 2 104 X 9927490 9927508 ACACGACCCACTAAGAGTG 59 9927573 9934733 ATAACGATTCGTGACAATGTCC 59 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 1 2 2 110 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359182 10359201 GTAGTTCTTGTGATGCGGTG 59 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 2 4 4 80 X 10655534 10655625 ACCGTATCCCGATGATATTATCTG 59 10655477 10655497 ACCTTGGACATAATGGACCAG 59 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 1 4 4 116 X 10676325 10676422 GTACAAGCAGGTCTTCCTG 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 1 1 1 74 X 10733433 10733452 GCTCAAAGGATTTGGATGAC 57 10733546 10733564 TGATTGTTGATGTGGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 3 2 2 265 X 10947215 10947383 AATAGTGTGCTGCGAACCT 59 10946792 10946811 TTCAGGTTGCAATAAACCGG 59 NA DesignRelaxed Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 3 1 15 122 X 11290023 11290044 TTTCATCCGGACAACAATTGTC 59 11290127 11294829 GCATAAAGGCTGTCGACTG 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 2 4 4 161 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444960 11445071 TTCAATCCATCTTCTATGCGC 58 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 1 2 10 89 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848299 11856054 CGTTGATTGAGTTCGAATCCC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 3 6 7 118 X 12168166 12168184 TGGCAATTGCCAGATAAGC 58 12168265 12170555 CTATGTGAAACCTGGATGGC 58 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113444 3 1 2 110 X 12499326 12499344 CAACCTGGACAAGCAACAG 59 12499417 12499850 TTGATTCTCATTGGGCTCGT 59 NA Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073683 1 1 2 93 X 12554818 12554837 TGTCTGCTGATATTCTGCAG 57 12554893 12571780 TGATCGTTCATCGTTACGT 57 NA Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 2 2 2 103 X 12670826 12670914 CAAACTGTACCAGGAACGC 59 12670741 12670759 GCATTATGGTGGACATGGC 59 NA Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 3 2 2 80 X 12688609 12700942 CGACACCTTCAATAACATTCG 57 12688549 12688568 GTGAGGATTTCATTGTGACG 57 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073773 3 1 6 125 X 13265391 13267907 GCCCATCAAGAAATAATGAGTC 57 13267993 13268011 GTGCAGGAACGATTTCCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 83 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268334 TATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0073803 2 1 2 152 X 13479982 13480001 AAATGGGTTGGCCAAATACC 59 13480116 13483963 GGCCTTTAACTTCGACGTG 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 2 4 4 80 X 13606930 13607025 CCATGATTAGAAGACTGATTGAGG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073951,FBtr0073949 3 5 8 81 X 14820836 14820854 TTGGAAAGAGCGTCAAGGA 59 14820898 14824789 GTAAGCGTTCCCAATATGGC 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 2 2 5 93 X 15272251 15272269 TCCTATCGAAGTTCGGAGC 59 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 3 5 5 81 X 15749871 15749891 TCTATAATCGCGTTGGAATGG 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 1 4 4 84 X 15769164 15769182 CTAGATTTAGGCGATGGCC 57 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 3 4 4 80 X 16188807 16188827 ACAAATCTGAAGGAAGACTGC 58 16188677 16188765 GATAGGTGTACCTGGTGGA 57 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 2 2 2 193 X 16693340 16693358 TTCGATCTGAATGTTGCGC 59 16692942 16692960 GAGCCTTTGTTCTTGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 3 3 3 90 X 16867539 16867557 TGATGCTCATCGACGACTC 59 16867402 16867489 GTGAAGAAGGAATAGTGGAATCC 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 2 3 4 80 X 17022884 17022904 AGCACAAAGATCTTTGACAGC 59 17022946 17023196 AATGACCTGATGACCCTGC 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 2 2 6 175 X 17156846 17156864 GTATGATGAATCTGGGCGG 58 17157003 17163973 CGTATTGGCGCAAATATCC 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 1 3 8 97 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824462 17824629 AATGTTGACCTAGTGCACCA 59 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 2 3 8 98 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824461 17824628 AAATGTTGACCTAGTGCACC 58 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0112999 2 1 2 80 X 17938909 17938929 TCTCAAACAACATCTGGACGA 59 17938968 17939068 ACACCAGGTCTATCAATTTCCA 59 NA Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 1 2 2 80 X 18055281 18055301 AGTTGAAACAGGATACCATCG 58 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074594 1 1 2 81 X 18412046 18412064 TGTTCGAGCTGAAGGTGAG 59 18412104 18412868 GTCAGCACTTCAATTCTCATAGTC 59 NA Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 1 2 2 99 X 18734583 18734674 TCATGAAATCAACCGTGAGGA 59 18734735 18734753 TAGTAGTTCGCCTCGTCCT 59 NA Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 1 2 2 169 X 20540304 20540322 AATTCGACAGATTCCGCGA 59 20540455 20540537 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 1 2 2 169 X 20540304 20540322 AATTCGACAGATTCCGCGA 59 20540455 20541712 CTTGCATCAGAGTCACCGA 59 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 2 2 5 148 X 21886225 21886243 GAGGTGAAGAAATCGCCAG 58 21886353 21887248 TCGACATATTTATTGCCCAGC 58 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300806 2 1 2 157 XHet 47490 51938 CAAAGCAACTAGCAACGCA 59 52056 53592 GAAGTTGATCCACCGTAAACAG 59 NA Drosophila melanogaster 61 tRNA:M3:70Fb FBgn0011928 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32153 FBgn0052153 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD12 FBgn0086068 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41506 FBgn0085789 FBtr0114242 2 1 1 158 YHet 338144 338235 TTGCTAAACTACAACTCACCC 58 338353 338373 CCTTTCCTGGTAAATTCCTGG 58 NA Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 3 2 2 80 XHet 78158 78176 GCTCAAGTACGAGAAGGTG 58 78219 78303 TGAACATAGACCAATGTGGG 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1854b FBgn0083041 FBtr0113569 2 1 1 63 X 17039684 17039703 GATCCTTACAGGGTTGTGGT 59 17039640 17039661 AAGAGGAATAGCTAATCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr004:X FBgn0047095 FBtr0091949 3 1 1 92 X 19068650 19068668 CTGAAGAGTCCCACTTCCG 59 19065305 19068598 CAATTATCGAGGGTATCTTGGTG 59 NA Drosophila melanogaster 61 CR33963 FBgn0053963 FBtr0100004 2 1 1 60 X 12553623 12553643 TTTCTCGTGTATCTTGTGGTG 58 12553663 12553683 AAGGGAATGTAAGTTGACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070634,FBtr0070635 1 2 2 60 X 3753644 3753665 CATTACAGACTTGTGCTTTCTC 57 3753605 3753625 TCATAGGCTTTGTTACACCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 S6kII FBgn0011285 FBtr0077360 1 1 1 98 X 21934326 21934697 CTCTGCGATTTGGGTTTCG 59 21934759 21934777 CTTTAGAACCTCGGGAGCC 59 NA Drosophila melanogaster 61 CG17600 FBgn0031195 FBtr0077359 3 1 2 180 X 21942405 21942601 GATATTTATCGTTTCGGTCGGA 58 21942804 21942822 ATCTGGGTGGCATACATCC 59 NA InUTR Drosophila melanogaster 61 CG32523 FBgn0052523 FBtr0077183 1 1 1 130 X 21089177 21089262 AATGATGTAGTTCCGGCAG 57 21089356 21089374 AAATCGTTGTGTCCACCAG 58 NA Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0077267 1 1 2 95 X 20902682 20902700 GTCTACTTTGACGAGCTGC 58 20902552 20902623 AGGAAAGAACCTGTCGACC 59 NA InUTR Drosophila melanogaster 61 CG11235 FBgn0031135 FBtr0077281 2 1 1 271 X 20743399 20743417 GTTTCTCCAACGTTCCCTC 58 20746178 20746197 TTCTCAAAGTCGTCCGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 2 5 5 80 X 20644230 20644249 ACGCTAATATACAGGGTGGT 58 20643791 20644187 ACGCACTAACCTAAATCGC 58 NA Drosophila melanogaster 61 HERC2 FBgn0031107 FBtr0301344 2 1 1 157 X 20271553 20271631 ACCGAAGAGAAGTCATCGG 59 20271752 20271770 CTTGACTTGTCCAGCTGAC 58 NA Drosophila melanogaster 61 l(1)G0004 FBgn0027334 FBtr0077298 2 1 1 71 X 20263144 20263163 TAGCAAGATCCACATCCTGG 59 20263197 20263215 AGGATTAGGTTGCAGACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33487 FBgn0053487 FBtr0089464 2 1 1 62 X 20089095 20089113 CATCAAGCACGAGATGTCC 58 20088969 20089069 TGGACGCACTCAACTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 skpD FBgn0026174 FBtr0074796 3 1 1 61 X 19707125 19707144 GATCAACCCATCTTGTTCGA 58 19707167 19707186 TCTAGGCCCTTAATCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bap FBgn0010380 FBtr0074789 3 1 1 82 X 19625112 19625419 CTATTTGAAAGTACGCAGCTAGG 59 19625461 19625479 AAGATCTCGCCCTTCTTGG 59 NA InUTR Drosophila melanogaster 61 CG14204 FBgn0031032 FBtr0074729 2 1 1 81 X 19478392 19478472 CCATATTCACAGTCGTTCTACTG 59 19478512 19478531 TCCGGACACAAGAAGTAGTC 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299623,FBtr0299624,FBtr0299622 3 4 4 80 X 19038525 19038610 AATGTGTTTCGCATCAACC 57 19038463 19038482 CAGGTACAAACTGTTCACCT 57 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 3 2 2 88 X 19019674 19020053 TACAATCCGAGATCGTGCA 58 19019604 19019623 TAGTCGTACACGTACAGCTG 59 NA Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074632 2 1 2 91 X 18673865 18674718 CACTACGTGAAAGGATGCC 58 18674773 18674791 GGTGTCTGTCAGATCGGAG 59 NA InUTR Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606,FBtr0074605 3 2 2 91 X 18641011 18641029 AACAGCAGTTAGGAGAGCA 58 18640885 18640904 GGTCAAATGGATGGCAAGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp308a1 FBgn0030949 FBtr0074604 1 1 1 80 X 18604035 18604056 ATTGGTTGGGAATATGTTGGAC 59 18604093 18604175 GGATTCCGAGTATAGATTTCCTG 58 NA Drosophila melanogaster 61 wgn FBgn0030941 FBtr0074617 1 1 1 75 X 18522834 18522852 ATCGACTGGGTTGTCTTGG 59 18522711 18522729 CGAAGTGCTCATACTCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 3 7 9 139 X 18267245 18267336 AAATCCCTCCAACCTTTCC 57 18267438 18267457 GATCTTATTGTACGACGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Andorra FBgn0030898 FBtr0074591 2 1 1 60 X 18072905 18072924 CTGCTAATCGGCTATTTCCC 58 18072864 18072885 TATATTCCACATAGAGCGACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 2 1 1 70 X 17744711 17744790 AAAGCACCACAAGTTGGAG 58 17744824 17744842 CCTCGGTTTGCTTCATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 OdsH FBgn0026058 FBtr0074461 2 1 1 85 X 17705864 17705883 AGGGAAGTCACTATCCTGAC 58 17705931 17707351 GAACCAAACCGCTATACGA 57 NA Drosophila melanogaster 61 CG8326 FBgn0030851 FBtr0074486 2 1 1 140 X 17523297 17523387 CAGAAGGAGAAGAAACTTTCCA 58 17523178 17523197 AATTTCGCCCAATCTTAGCT 58 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 3 3 4 81 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022948 17023198 TCAATGACCTGATGACCCT 58 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 2 2 2 83 X 16605540 16605561 TGAGCTATCAAGATATGTTCGG 57 16605605 16605697 GTCCAGAGAACCGAAACTC 57 NA Drosophila melanogaster 61 CG13012 FBgn0030769 FBtr0290216 3 1 1 120 X 16563465 16564098 AGGACTCGATTACCAAGGTG 59 16563364 16563382 GATACCATGGACACGAGGA 58 NA Drosophila melanogaster 61 eIF-2alpha FBgn0004925 FBtr0074300 2 1 1 129 X 16340310 16340328 CTCCTGCTACGGTTACGAG 59 16339900 16340221 GGATGTGGTCATTACATAGAGTG 58 NA Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 3 2 2 189 X 16182485 16182504 TGAATTGGTGTTTACGTGGA 57 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15602 FBgn0030694 FBtr0074097 1 1 1 108 X 15694063 15694139 CTATTCAACGACAGCCTGC 59 15694207 15694229 CCAGGTTCTCATCAATATGATCC 58 NA Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191 3 1 2 96 X 15679299 15679320 TGTTTATGCTAGCGACTATCAG 58 15679152 15679245 GATTCCTATTCCGGATACTTGG 58 NA InUTR Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 2 3 3 187 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377388 15377406 ACATCGGCTTTGTCTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 Cyp4s3 FBgn0030615 FBtr0074028 1 1 1 80 X 15009431 15009518 CAGGCTGTTCAATCTATTTGC 58 15009371 15009391 GTGCTTAAAGAACACGTTGAG 58 NA Drosophila melanogaster 61 CG9009 FBgn0027601 FBtr0073972 2 1 1 124 X 14829456 14829478 CCCTCTTTATGATTAACCATCCC 58 14829296 14829372 GTTCGGGAACTTGTTCAGG 58 NA Drosophila melanogaster 61 CG9503 FBgn0030598 FBtr0073974 2 1 1 83 X 14815136 14815270 ACATCTTGCTTGGCAATGC 59 14815071 14815094 CATATAGTTAAGAACAGAGCTGCC 59 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991,FBtr0073990 3 2 4 99 X 14722053 14723176 TTCAGCAGATCTTCAGAGCC 59 14721973 14721994 CCACTATAATGGCACCATTCTC 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 2 4 4 80 X 13726825 13726845 ATCCAGATATGAGCCAATTCG 58 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 CG11092 FBgn0027537 FBtr0073828 1 1 1 80 X 13718182 13718200 GAGGGTCAGCTAAAGTTGG 57 13718244 13718335 CAATACGACGTATACCGCC 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535,FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 8 8 86 X 13663018 13663039 TACTATTATCCGGACAATGGCT 58 13663083 13663187 GTCAATTACGTCTACGATACGA 58 NA Drosophila melanogaster 61 g FBgn0001087 FBtr0073842 3 1 1 80 X 13628757 13629984 GGATAATGAGGCCAAATACATATCG 60 13628701 13628725 CACTTGACACTTATATTGTCCTGTC 59 NA Drosophila melanogaster 61 g FBgn0001087 FBtr0073842 2 1 1 80 X 13628768 13629990 CAACAAGGATAATGAGGCCA 58 13628707 13628727 ACACTTATATTGTCCTGTCGC 58 NA Drosophila melanogaster 61 CG15731 FBgn0030390 FBtr0073670 1 1 1 129 X 12351534 12351730 TCCAGCAATGAAGATCTTTGTG 59 12351426 12351444 GTGGATCACCTGGATGGTC 59 NA InUTR Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 2 3 3 81 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346755 12346776 AATTAGCATTTCGTAGAGCAGC 59 NA Drosophila melanogaster 61 CG2750 FBgn0030376 FBtr0300918 3 1 1 94 X 12001682 12001823 TATGACCTATGAGACGGATGC 59 12001876 12001897 GATTGCTTAGGTTAATTCCCGT 58 NA Drosophila melanogaster 61 FucT6 FBgn0030327 FBtr0073620 3 1 1 80 X 11602824 11603251 TCGACGAGTTGATGAGTGAC 59 11602763 11602782 GATTTAGCGCATCGTTCTCC 59 NA Drosophila melanogaster 61 CG33235 FBgn0030307 FBtr0073545 3 1 1 60 X 11384052 11384073 GGAATTTCACTTTGACGAAGGA 59 11384013 11384034 CCGATATGAGATTTCTTTCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32668 FBgn0052668 FBtr0073469 2 1 1 80 X 11053043 11053130 ATTAATGCGATCCTCCAGGA 58 11052982 11053000 TCCTCCTAGGATGAAGCCA 59 NA Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299862 1 1 2 106 X 10871823 10871841 CACGCACAATCATCATGTC 57 10863488 10871753 ATTCCACGCAGTATTCCTG 57 NA Drosophila melanogaster 61 v FBgn0003965 FBtr0073386 2 1 1 82 X 10819166 10819277 AAGTGGAGATACAATCACGTG 58 10819321 10819339 TGATATCCAGACGAGCCAC 59 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073408 2 1 3 80 X 10767737 10771463 CATCTGTCCTTTGGAGAAACC 59 10767677 10767697 CTCACAGATTGATTCGTTGGT 58 NA Drosophila melanogaster 61 CG2898 FBgn0030195 FBtr0071445 1 1 1 60 X 10269752 10269771 GGTTAGCAAGTTCCAGATCC 58 10269793 10269812 CGGTCTGCTCTCATGATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12641 FBgn0030193 FBtr0071443 2 1 1 193 X 10241456 10241474 CAAATCGCATTCCCTGGAC 59 10241631 10241649 TCTGTAGACACTGTCGGAG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Gr9a FBgn0052693 FBtr0071420 1 1 1 103 X 9956373 9956391 CTTGTTCCTCTTTGGCCAG 58 9956458 9956538 GGTGTTTGGACTTGGACAC 59 NA Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071391 3 1 2 137 X 9778770 9778788 AGTACGACGAACTGAAGCA 59 9778889 9778976 AAATCCCTCATGGGATCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 2 3 3 81 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148065 9148156 AGTGAGCAGATCAGAGTCC 58 NA Drosophila melanogaster 61 fend FBgn0030090 FBtr0071349 3 1 1 171 X 9028115 9028135 GCTATCGGTATCGGTATCCTC 59 9021138 9027983 CTTGGAAAGCTGCTGATAGC 59 NA Drosophila melanogaster 61 sni FBgn0030026 FBtr0071183 1 1 1 60 X 8137003 8137022 CATCTATTTACCACCTGCCG 58 8136268 8136286 TCTTGGCTAGATCCTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15337 FBgn0030014 FBtr0071160 3 1 1 97 X 8054229 8054247 CAAGCCCAGAACCAAACTC 59 8054375 8054395 GAATAGGACGTGAGGATACCG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071095,FBtr0071094 1 2 2 123 X 7828194 7828212 ATGTCACTGATCTGTCCGG 59 7828299 7828376 TTCTCAGCCACATCCTGAG 59 NA Nonspecific Drosophila melanogaster 61 bou FBgn0261284 FBtr0071004 3 1 1 60 X 6880914 6880932 CTATGTGCGAAACAAGGGC 59 6880953 6880974 CGTATCACAAGTGTAAATGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0070995 2 1 2 60 X 6745087 6745106 TGAGTATCGTTTCGATTGCT 57 6745128 6745147 ACAGTGAACCTTCTGATGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mipp2 FBgn0026060 FBtr0070884 3 1 1 82 X 5978077 5978263 GCCATTAGTTCCTCTGAGG 57 5978013 5978031 AATTTGAGAAGCGTACCCG 58 NA Drosophila melanogaster 61 CG15772 FBgn0029799 FBtr0070808 1 1 1 73 X 5646662 5646682 CCATCCGCCTCATAAATACAC 59 5646898 5646916 AATCTCCTCCACCATGTGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 1 2 2 145 X 5512503 5512607 AGCCGGAATTGTACAAACTG 58 5512377 5512395 GTACTCGGAGCCGTATAGC 59 NA Drosophila melanogaster 61 CG32772 FBgn0052772 FBtr0300997 3 1 1 104 X 4805119 4805137 CATCAGAACTCGCAACAGC 59 4805204 4806787 TATCAGATCCACGTCTTCGG 59 NA Drosophila melanogaster 61 CG12681 FBgn0029730 FBtr0070717 2 1 1 60 X 4771017 4771036 ATAATTCGGTCAAGGACGCA 59 4771055 4771077 TCTAGGTTAGCGATTAACGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32779 FBgn0052779 FBtr0070601 1 1 1 155 X 3697168 3697186 GAATGTCAGTCCTGGTCAG 57 3697304 3697323 CACGAGAGGTTCTTATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12535 FBgn0029657 FBtr0070534 2 1 1 80 X 3286920 3287072 TACGGAATCGTAACGATCTC 57 3286859 3286877 GAAGCACTCCATCGTTAGG 58 NA Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 3 1 1 79 X 2842164 2842251 AAGTAGCCCTGGTAACAGG 58 2842294 2842312 CACTTTGGCACCATCTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3592 FBgn0029642 FBtr0070551 2 1 1 60 X 2829425 2829443 CTATGCGTGGGTGAATCTC 58 2829465 2829485 CGGAGATGAAGTCTCCTAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pgd FBgn0004654 FBtr0070384 3 1 1 155 X 2039435 2039528 GAAACATGAGCGGACAAGC 59 2039647 2039665 TGTCCTTAGCCTCATTGGC 59 NA InUTR Drosophila melanogaster 61 CG3573 FBgn0023508 FBtr0070317 2 1 1 80 X 1818755 1818774 CAAATCGGAGAAGTGAAGCA 58 1818815 1818896 GGCGCAGTAGATGATTATGTC 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089990,FBtr0089989,FBtr0089991 1 5 5 96 X 1790781 1793025 CAGAATCGAACCATGTCGC 59 1790703 1790721 AATTCTGCTGCCACATGAG 58 NA Drosophila melanogaster 61 CG14817 FBgn0026089 FBtr0070365 3 1 1 123 X 1770940 1771015 CGTATCTCACCATGGAGCA 59 1770835 1770853 TCCTCGATGGTAACGTGTG 59 NA Drosophila melanogaster 61 Vps26 FBgn0014411 FBtr0070311 1 1 1 92 X 1768277 1768295 TGCTGCTATTCTACGACGG 59 1768430 1768448 TCTTAATGCCCTGGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070367 3 1 2 83 X 1762733 1762828 GATAAACAGTTACGTAGCATCTCC 59 1762673 1762691 AGGATTAACTCCACCGCAG 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 2 3 3 82 X 1270211 1270739 GTTGTACCAGGTCATATCGAC 58 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 CG11409 FBgn0024366 FBtr0070238 3 1 1 171 X 1227556 1227575 AGATACTAGCCAACGATCCG 59 1227338 1227356 TTGTTGTCCGTGTTGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11403 FBgn0026876 FBtr0070245 1 1 1 95 X 1131807 1131825 TTTGCTCATAGAGGCAGTG 57 1131672 1131690 CAGGAAGCAAACTACTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11638 FBgn0040351 FBtr0070183 3 1 1 157 X 909302 909321 TAAGTCAGGTCTATCCTCCG 57 909104 909182 TGTCCTCAATGTCCTCCTC 58 NA Drosophila melanogaster 61 CG3690 FBgn0040350 FBtr0070185 3 1 1 98 X 844060 844078 AACAATCTGATTGTGGCCG 58 843915 844001 GAGTCCACTGGTCATTATAAGC 58 NA Drosophila melanogaster 61 CG3706 FBgn0040342 FBtr0070189 3 1 1 60 X 826258 826276 TTACCGGGTGAAGTTCTGG 59 826216 826234 GTAGATGCGGTACCTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3713 FBgn0040343 FBtr0070195 1 1 1 60 X 740980 741000 CACTGACCTTTGAACTCATCC 59 740940 740958 AAGCTATCATCGCACTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13360 FBgn0025620 FBtr0070147 3 1 1 104 X 682698 682719 AGATCACTGTGCTTAATCATGG 58 682551 682634 GGAAATCCACGAATATGGCA 58 NA Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0112928 3 1 2 90 X 672168 672186 GGATGACGTTTCCATCGTG 59 672240 675523 CACCAGTTTGGCAATCTGG 59 NA Drosophila melanogaster 61 CG18273 FBgn0029525 FBtr0070094 3 1 1 85 X 379113 379137 GATCTTTGTTCTATACAGGGATCTC 58 378990 379076 GCATAAGATCTATTAGTAGCTCCAG 58 NA Drosophila melanogaster 61 Or1a FBgn0029521 FBtr0070070 1 1 1 123 X 210304 210322 CTTCCTCCTAAACACCGGA 58 210409 210537 CTGCTGTGCGAAATATCCA 58 NA Drosophila melanogaster 61 CG40813 FBgn0085521 FBtr0113934 3 1 1 91 U 3136495 3136513 CAAGCACATGACCTTGACC 59 3136567 3136659 GATGCTTACTTGACTGCGAC 59 NA Nonspecific Drosophila melanogaster 61 CR32009 FBgn0052009 FBtr0089180 3 1 1 111 4 48503 49545 GCTGTTTGCTAAGGATATTCCA 58 48413 48431 CTGTTGCATCGCTGTACTC 59 NA DesignRelaxed Drosophila melanogaster 61 CR32011 FBgn0052011 FBtr0089182 2 1 1 112 4 30381 30560 ATTCGTTAAGAAGGGTGACAG 58 30289 30308 GGCTGGTAATATTGCATTGG 57 NA Drosophila melanogaster 61 plexB FBgn0025740 FBtr0089179 2 1 1 239 4 61908 63554 GAAGCATTCGACAAGGAGC 59 61687 61706 TTAAATCATCAAGTCGGCGG 58 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi28S-3405b FBgn0082959 FBtr0113589 1 1 1 60 3R 24427666 24427687 AGACCCAGCCCATATTATATCG 59 24427705 24427726 TACTCTTTCATCGTTGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-3 FBgn0084245 FBtr0113490 3 1 1 140 3R 12589320 12589338 CTCAAAGGGAAAGCCAACG 59 12589198 12589219 AAGAAGCGATGAATTTCGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphagamma-element:CR32865 FBgn0052865 FBtr0082678 1 1 1 60 3R 8302999 8303019 TTAGAGTTTAGTGGAGAGCGG 59 8301384 8301405 TTCGTACAGACATCTACTTCCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG42233 FBgn0250755 FBtr0290135 3 1 1 81 3R 27630082 27630253 AGCATGACCTAGAAACAGGG 59 27630020 27630042 CTGATCCTGTCTACACTTAAACC 58 NA Drosophila melanogaster 61 chp FBgn0000313 FBtr0085778 3 1 1 80 3R 27032428 27032503 TACAATTCGCTGATGAACACG 59 27032368 27032386 CCAGTTGTAGCTGAGGTCC 59 NA Drosophila melanogaster 61 CG33773 FBgn0053773 FBtr0091774 1 1 1 98 3R 26861295 26861316 GAGAACTGCAACTTAAAGTCCA 59 26861372 26861462 GAAATTTACCTTCATCCTCGGC 59 NA Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 3 2 2 87 3R 26520527 26520547 CTATAGAGACCTCAAACCGGA 58 26520392 26520480 TTCCACTTTCTTGGCAAATCC 59 NA Drosophila melanogaster 61 CG34041 FBgn0054041 FBtr0302521 2 1 1 80 3R 26334889 26334953 ATTGACGAAGCCCTTATCG 57 26334996 26335015 CACTGGACTAGATGCTATGG 57 NA Drosophila melanogaster 61 CG34300 FBgn0085329 FBtr0112496 2 1 1 123 3R 26132009 26132080 GCAGTATCTTGCAGATCGA 57 26131904 26131923 GATTCTAGAGTGCAGAAGCT 57 NA Drosophila melanogaster 61 CG9733 FBgn0039759 FBtr0085638 2 1 1 84 3R 26071297 26071315 TCAATCGGCGATATGTCCT 58 26070408 26071249 AGTCTCACCGACACAAGTG 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 2 3 4 88 3R 26032435 26033824 TGAACACAAAGTCGACACC 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 CG1983 FBgn0039751 FBtr0085574 2 1 1 83 3R 26003230 26003248 GGAATTCGACGTCAAAGCC 59 26003101 26003183 GCTTGAACTTCTTTGGGCC 59 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597,FBtr0085565 1 2 2 80 3R 25893715 25893733 GATTCCGTTGGGAACTAGC 58 25893776 25894044 TCATGCATCTTGTCATCCAC 58 NA Drosophila melanogaster 61 Sry-alpha FBgn0003510 FBtr0085557 3 1 1 60 3R 25868014 25868035 TGATCTTTAGGAACGTCATCCA 59 25868054 25868074 AGGTAGTTGTTGATCAGGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sas-6 FBgn0039731 FBtr0085546 2 1 1 173 3R 25821103 25821121 GAGCGAGGATAGCTACTCC 58 25821257 25821335 GTTAATCGGAGTTGCAGCAG 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 1 5 6 205 3R 25705384 25705403 GCAGTTACTCTGACTAGCTG 57 25723060 25723078 TTGTTGAAGCCGATGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7837 FBgn0039696 FBtr0085537 3 1 1 80 3R 25622599 25622684 CTGACAAATATTCTACTTGAGAGCC 59 25622543 25622564 GGTAAACTGGTACAGTTGATGG 59 NA Drosophila melanogaster 61 CG1907 FBgn0039674 FBtr0085447 3 1 1 159 3R 25445364 25445454 CTAGACTTGGTCAAGACCCG 59 25445576 25445594 TGTAGGTTGCCTGTCTCAG 59 NA Drosophila melanogaster 61 stg FBgn0003525 FBtr0085397 2 1 1 107 3R 25080666 25080684 CCAACGCAACACATAACAC 57 25079666 25080597 GAACTGCTGGTGTTATTACTG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG11951 FBgn0039656 FBtr0085403 3 1 1 80 3R 25062308 25062406 CCGAACAGGACTTAAACTGG 58 25062247 25062266 AAGATTACCCACTGATCGGG 59 NA Drosophila melanogaster 61 CG14512 FBgn0039639 FBtr0085413 2 1 1 60 3R 24964132 24964150 CCGGAAATGCACCAAACTC 59 24964090 24964111 TTCATCGTCTGTTAATGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 2 3 3 103 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951602 24951620 CAGATGAGGCGACTATGCA 59 NA Drosophila melanogaster 61 Cul-5 FBgn0039632 FBtr0085417 3 1 1 80 3R 24886017 24886093 TCGTGGAAAGCTGAATCTC 57 24885955 24885974 TGCACAATGGATTGATTGTC 57 NA Drosophila melanogaster 61 CG14061 FBgn0039598 FBtr0085313 3 1 1 60 3R 24583292 24583311 GGCCTAAAGGAGGTATTCCA 58 24583251 24583272 TGTTTCGTACGCAGATAAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10011 FBgn0039590 FBtr0085319 3 1 1 131 3R 24435785 24435803 TGATGGTCAACTCGAAGCA 59 24435612 24435690 TCATGTTGGATGCAAGCTG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 1 4 4 80 3R 24146990 24147104 TATGAAACAGGTCAACTGTACG 58 24146931 24146949 CACCTCCAACTTCTCACCA 59 NA Drosophila melanogaster 61 Ser FBgn0004197 FBtr0085128 2 1 1 80 3R 23017274 23017295 GCGATTGTCGATCATTAAAGTC 58 23014174 23017234 CAGCTGCGGATATCTTATGG 58 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 1 2 3 106 3R 22788797 22788892 CAGCTTCACTGAGTTCGTC 58 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 3 3 3 80 3R 22686674 22686758 CTCGACAAATGAGCTGTTGG 59 22686613 22686636 GTATAGTTCTTGCCATCCTTAAGC 59 NA Drosophila melanogaster 61 CG6425 FBgn0039449 FBtr0085047 2 1 1 81 3R 22542945 22542963 ATCTTTAACGCTCAGCACG 58 22542823 22542841 ACTTACATTGTGCCCTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 TwdlD FBgn0039444 FBtr0085035 1 1 1 60 3R 22465809 22465892 ATCGTCCTCTGTCTGTTGG 59 22465916 22465934 GTTGGTAGTTGTAGCCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31082 FBgn0051082 FBtr0085022 1 1 1 60 3R 22411307 22411326 ACTCACCGGACAATATTCTG 57 22411348 22411367 TTCTCACGCAGCAAATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 2 1 1 140 3R 21885469 21885541 AAATATCATCGGCGTGGAG 57 21885643 21885663 ATCATACTAATATCCGGCGTG 57 NA DesignNoJunction Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 3 3 3 87 3R 21884734 21884752 GACTCTGAGACGACGTCTG 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 m6 FBgn0002632 FBtr0084959 1 1 1 78 3R 21858777 21858795 TCAGCGATACGATAGCCTG 59 21858837 21858855 CAATCCCACTTGAGTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm5 FBgn0002631 FBtr0084979 2 1 1 60 3R 21855144 21855162 CAAACAGGTCGTCAAGCAG 59 21855102 21855122 ATTCTTGAAGCTATCCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 1 1 2 171 3R 21434507 21434594 GTTAAGAAAGAATCTGGTACCG 57 21419380 21419400 GTAGGAAACATCATGTCTGGT 57 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 2 2 2 161 3R 21053857 21056364 TTTAATAAAGCTACTCTGGGCG 58 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 CG31108 FBgn0051108 FBtr0084802 1 1 1 80 3R 20940745 20940764 CGGACCATGGATAGTTAAGC 58 20940629 20940703 TGAGGTATTTGATCTGGCGA 58 NA Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 1 2 2 168 3R 20767855 20767939 TGCCATACGAAACAAACCC 58 20767705 20767725 GATAAACGACTTGTACTCGCC 59 NA Drosophila melanogaster 61 CG5805 FBgn0039223 FBtr0084743 1 1 1 87 3R 20611625 20611703 TCTATCAGGACGAACTGTTCC 59 20611558 20611576 GTGAAGCCACCTAAACTGC 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 2 4 4 117 3R 20048095 20048116 TTCCTGAGAAAGTATCTAGCCG 59 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 CG6129 FBgn0039152 FBtr0084544 1 1 1 82 3R 19948739 19948815 GTTGAATTTGAGGTCTGAGGA 58 19948859 19948877 TCACTCGGTTAAGCTCCTC 58 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084536 3 1 3 90 3R 19876650 19876669 ACAATTCCCGCTGATAAGAG 57 19877430 19877449 AATTGTTGCTTCCGTATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 2 2 3 190 3R 19812925 19813002 AGTAGCAGAAGACGATTAGAGG 59 19813152 19813171 TGTTGTAGTGGGAGTTGGAC 59 NA InUTR Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 2 2 2 87 3R 19587401 19587419 GAAATCCTGTGCCTGTTCG 59 19587274 19587353 CCAAGAATTCTCGTTCTGAAGG 59 NA Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 2 2 2 91 3R 19519809 19519827 AAGATGTCGATTCGCTGTC 58 19519575 19519754 CAGACCAATCGACTGTTCC 58 NA Drosophila melanogaster 61 CG10177 FBgn0039083 FBtr0084424 2 1 1 60 3R 19346904 19346925 TTAACATCGCTGAGTTGTTTCC 59 19346865 19346883 CTTCGTTCTTACAGCAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6763 FBgn0039069 FBtr0084378 2 1 1 91 3R 19111281 19111299 CTTCTCCATCAACGGACAG 58 19111419 19111438 TATCGTAGTCGGAGAAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34111 FBgn0083947 FBtr0110800 2 1 1 95 3R 19070446 19070464 CAAATGTTCCCGAGTGCTC 59 19068249 19070388 ACTACTTTGTGGAGTGCTCC 59 NA Drosophila melanogaster 61 CG17111 FBgn0039048 FBtr0084355 3 1 1 80 3R 18889527 18889545 AGTGTGGATAGCTCAGAGC 58 18889403 18889484 GTGTGGGAACATGTGTTCTG 59 NA Drosophila melanogaster 61 CG7031 FBgn0039027 FBtr0084313 3 1 1 123 3R 18630088 18630509 TTAATTTGCAGATGCCGCT 58 18630593 18630614 CCCATATTGTGATACAATGGCT 58 NA Drosophila melanogaster 61 Rpn7 FBgn0028688 FBtr0084294 1 1 1 60 3R 18286820 18286840 GAGAACTTCTACGTACACCTG 57 18286780 18286798 GAATGAGGTAGTCCAAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0301007 1 1 2 105 3R 17704021 17704044 CCTATATGAAGTACCACTGTAGCA 59 17703784 17703957 AAGAGCATTGGTAAGCCCA 59 NA Drosophila melanogaster 61 CG31431 FBgn0051431 FBtr0084137 2 1 1 92 3R 17697850 17698142 GTTGACTATACAGAGAACACAGAG 58 17698193 17698211 ACTCTCATCGACCAGACCT 59 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084167,FBtr0084168 1 2 2 80 3R 17596862 17596943 CTGTGATTAAGACTCCCACTG 58 17596802 17596821 GTGAAACCACGAAATTGGAC 58 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084054,FBtr0084053 3 2 2 60 3R 17084707 17084725 ATAGTCATCATGCTGCTGG 57 17085196 17085214 TCTTCACAATCACGATGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 1 3 3 87 3R 16837130 16837658 AATTCAAGGCTACAGTCGAC 58 16837706 16837726 TCTTTGAACTGTTCCTTCCAC 58 NA Drosophila melanogaster 61 CG17270 FBgn0038828 FBtr0083994 2 1 1 80 3R 16643076 16643094 GAGGCACTCTACTTTCGCT 59 16642920 16643038 GCCCAGTAGAGTTATAGAATTTAGC 59 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 2 2 2 61 3R 16564040 16564324 GGCTCCAGAAACTATCCCA 58 16563997 16564015 CTTCTGTATCCACCACGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 1 8 8 80 3R 16148795 16148813 ACACTAACTCGGACTCCAG 58 16148855 16148947 CCAAAGCAAGTTGCTTAATGG 58 NA Drosophila melanogaster 61 CG5023 FBgn0038774 FBtr0083866 3 1 1 170 3R 15995228 15999817 TAATTCACAATGGCTCCACG 58 15999950 15999968 GATCTTCTTCACCGATCCG 57 NA InUTR Drosophila melanogaster 61 CG4973 FBgn0038772 FBtr0083835 1 1 1 95 3R 15884380 15884400 CAAGTATGAGATTCACTCCGA 57 15884457 15884542 TGCTTGCACTTTGTTACCA 58 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 3 2 2 80 3R 15681145 15681167 TACTCTCCCACGAATACAATCTG 59 15681025 15681108 ATTGCTCAGCAAGGATAATTCG 59 NA Drosophila melanogaster 61 CG34286 FBgn0085315 FBtr0112482 3 1 1 82 3R 15541509 15541528 ATCCTGCTTGTTGTAATCGT 57 15541390 15541467 CTTTCCAGATGAATCTGTTTCG 57 NA Drosophila melanogaster 61 CG3581 FBgn0038697 FBtr0083775 1 1 1 60 3R 15200231 15200250 TAACCAGATGGCAAATTCCC 58 15200190 15200208 CACTCGTAGAACTCCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 1 5 5 103 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 CG14294 FBgn0038656 FBtr0083726 2 1 1 60 3R 14727711 14727731 CACGATTTCTACGTCAAGCTG 59 14727671 14727690 TATCCAATACTTCACGGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34283 FBgn0085312 FBtr0112479 1 1 1 164 3R 14548187 14548205 GAGGAGCACCTAGTCTGTC 58 14547984 14548062 GATATGATTCTCCATTTCGGCA 58 NA Drosophila melanogaster 61 CG18600 FBgn0038601 FBtr0083594 2 1 1 89 3R 14126691 14126710 AAGTTTGATCCCGAGCTCTC 59 14126564 14126643 GATTTAATGGGTAGAGTCTGCAC 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083567,FBtr0083565,FBtr0083566,FBtr0083568 3 4 4 82 3R 14073562 14073580 ATTGCCATGAACGATCTGC 59 14073621 14073712 AGAATCTCATAGTAGAACACCGAG 59 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611,FBtr0083613 3 2 3 231 3R 14024463 14024483 TCAAAGTATTAGGGCGTTCAC 58 14022659 14022677 ATGGAGAATGAAACGCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7215 FBgn0038571 FBtr0100283 2 1 2 60 3R 13992106 13992125 AATCATTTCACTGCGATCCC 58 13991871 13992084 GGAGTCTCCTACTTTCACCA 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14318 FBgn0038544 FBtr0083530 1 1 1 118 3R 13603072 13603684 AAGAAGACGATAGCGTGGA 58 13602972 13602990 TTTCTGTTAGGAGCATGCG 58 NA Drosophila melanogaster 61 CG31360 FBgn0051360 FBtr0083480 1 1 1 80 3R 13511041 13511062 GGAGAATTTCACTATGAAAGGC 57 13511165 13511183 TTCAGGAAATTCGCGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7587 FBgn0038523 FBtr0083460 1 1 1 153 3R 13420470 13420488 CAAGTGCTTCCTTGGATGG 58 13420603 13420680 GCTGATATAGGGTTTGTTGCA 58 NA Drosophila melanogaster 61 CG14330 FBgn0038512 FBtr0083443 2 1 1 60 3R 13282270 13282289 ACTCTTCTACGAGATACCGC 58 13282229 13282247 TTAGCATTTCCGACGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Det FBgn0259784 FBtr0083408 1 1 1 100 3R 12975816 12975834 GAAGATGATCCGTGGAAGG 57 12975897 12975977 TCCAGAAATTGTGATACGGT 57 NA Drosophila melanogaster 61 CG3590 FBgn0038467 FBtr0083373 3 1 1 60 3R 12845620 12845640 TTACCCAAAGGTGATTGAACG 58 12845580 12845599 GTTCTCTGTGGACATGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MESK4 FBgn0043069 FBtr0083367 1 1 1 85 3R 12815103 12815121 ACTTTAATCCTGGACCGCA 59 12815167 12815252 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 3 2 2 147 3R 12307053 12307121 GGCGCATTAAATCTGAGCT 58 12307232 12307250 ACTATGTTCAGCCGATCGG 59 NA Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 2 2 2 104 3R 11790730 11790804 TCACTAAAGGTAGAGGAGCTG 58 11790646 11790665 CGACAGATCTATGTGGAGGG 59 NA Drosophila melanogaster 61 CG3303 FBgn0038381 FBtr0083200 1 1 1 80 3R 11735002 11735080 GGTACACAAGGATATTGTGAGC 59 11735121 11735139 CTGGAGTAGGGAGTGAACC 58 NA Drosophila melanogaster 61 CG31150 FBgn0051150 FBtr0083189 2 1 1 80 3R 11674488 11674507 TAAGTTCCATACACCTGGGC 59 11674369 11674446 AGTTACCTTCGATCCTGGTG 59 NA Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083156 3 1 2 88 3R 11334992 11335010 GCTCCCTGATCTATTGGGA 58 11334273 11334940 GTAACCGGAGAGTAGAGCT 57 NA Drosophila melanogaster 61 ldlCp FBgn0026634 FBtr0083114 2 1 1 95 3R 11186019 11186092 TGCTTTCAAGAAATTGCTGG 57 11185943 11185963 TTTGTAGTCACTATCGGTGAG 57 NA Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083135,FBtr0083134 1 2 2 60 3R 11054140 11054158 ATCCTATCCATCTTCGCCT 57 11054098 11054116 CCGAGTTATCTATGCCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6654 FBgn0038301 FBtr0083139 2 1 1 81 3R 11038035 11038053 CACTTAGCAAGCACATGGT 58 11037917 11037993 AGCATGGTGAATACTTTCTGAC 58 NA Drosophila melanogaster 61 CG6974 FBgn0038285 FBtr0083042 2 1 1 60 3R 10904434 10904453 CATGGATCAGACAACCACCT 59 10904393 10904413 CGAATAGTGCATAACGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8538 FBgn0038223 FBtr0273391 3 1 1 82 3R 10150532 10150550 GATTACCAATGGAGCAGCT 57 10150410 10150487 TCGCCGAAGAGTATATTCCT 58 NA Drosophila melanogaster 61 CG31327 FBgn0051327 FBtr0082904 3 1 1 60 3R 9984576 9984595 AGGACGTCTTTAATAGCGAG 57 9984535 9984555 CTTGGCACCTTTATATGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adgf-D FBgn0038172 FBtr0082845 1 1 1 80 3R 9531022 9531040 TGGTTTCTAGGTGCTTTGG 57 9530527 9530982 CAGTGTTTCATAGGGTAGATCTG 58 NA Drosophila melanogaster 61 CG14374 FBgn0040553 FBtr0082761 1 1 1 146 3R 9222801 9222819 CATCTGCTTGACCCTTTGC 59 9222673 9222691 TAGGTGGAGTATGCTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9799 FBgn0038146 FBtr0082763 1 1 1 155 3R 9212600 9212678 AAGGAAAGGTTGACAAGCC 58 9212463 9212481 CGAACTTGCGAACAATGAC 58 NA Drosophila melanogaster 61 CG8870 FBgn0038144 FBtr0082750 3 1 1 114 3R 9206530 9206625 TTTCCTGTGCGCTATACGA 59 9206703 9206721 TTCCTTGTCCCATGTCTGG 59 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 3 3 3 92 3R 9157365 9157631 TTGTTATGCTCAGGAATGCC 58 9157292 9157310 AACGCTCTCCAATATGCAG 58 NA Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 1 2 2 95 3R 9063840 9063858 CACGGGACAAATACCTGGA 59 9062985 9063783 CTTCCCAACTGGTATACTGGA 59 NA Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 3 2 2 81 3R 8866925 8866943 GTCCCTGTCATCTGTTGTC 57 8866806 8866883 CATTGTACTCCTGACATTTGGT 58 NA Drosophila melanogaster 61 CG12267 FBgn0038057 FBtr0082635 2 1 1 80 3R 8286518 8286606 TATCCTCGTTACGTTCACCT 58 8286646 8286667 TCCAGAATTAATCAACTCCTCC 57 NA Drosophila melanogaster 61 CG5844 FBgn0038049 FBtr0082591 3 1 1 250 3R 8260915 8260992 TTCAACCAGACCTTCAAGC 58 8261206 8261224 TCGTTTGGCTTATCCTTGG 57 NA DesignRelaxed Drosophila melanogaster 61 Dip-C FBgn0000455 FBtr0082597 2 1 1 60 3R 8238219 8238238 GACATAACCTGCACATTCCC 59 8238178 8238198 TGTAGATGAACTTCTGGTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim17a1 FBgn0038018 FBtr0082610 3 1 1 60 3R 8189865 8189883 CAGGGATAGTCATCAAGCC 57 8189823 8189844 GGATCAATAGTCTCCAGTATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spt3 FBgn0037981 FBtr0082537 2 1 1 60 3R 7843213 7843231 TTGCCAACGTTCTCATTCC 58 7843254 7843273 ATATCCGCAATCTCTGTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4596 FBgn0037849 FBtr0082289 2 1 1 70 3R 6699041 6699059 ATCACATCGTCAGTGTGCA 59 6699281 6699299 GAGCTCCTCTTCAAGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Cad86C FBgn0261053 FBtr0301933 3 1 1 80 3R 6671488 6671575 TTCGCATCAAGCATAACCG 59 6671617 6671637 GGTCGTTGATCAGATTAGTCC 58 NA Drosophila melanogaster 61 CG34107 FBgn0083943 FBtr0110787 2 1 1 81 3R 6050760 6050778 AAGCCTGTCGTAAGGACTG 59 6050822 6050909 AACCTTTGAAGCTGTAGGGA 59 NA Drosophila melanogaster 61 CG6241 FBgn0037792 FBtr0082185 3 1 1 88 3R 5968645 5969199 CAGAACTAAGCGCAATCTAGAC 59 5968578 5968596 ATTGCAGGTGGAGACTCTG 59 NA Drosophila melanogaster 61 CG33784 FBgn0053784 FBtr0091785 3 1 1 81 3R 5893840 5893918 TCTACGACTTGCGTACTAACC 59 5893961 5893979 GGCAAACATCTACGGTGAC 58 NA Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 1 1 1 61 3R 5642488 5642506 CAACATCGGACAAGTCCTG 58 5642373 5642464 CGAATAACAGATGGATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8301 FBgn0037717 FBtr0082073 2 1 1 90 3R 5410215 5410233 ATCTGAAGACCCTTCGCTG 59 5410287 5410950 TAGGATGCAAAGACCTCCG 59 NA Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 2 2 2 126 3R 5228660 5228679 TAACATTCTCCAACGCATGG 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081994,FBtr0081990,FBtr0081993 2 5 5 127 3R 4897393 4897487 TCAGCATGTGCTTGAACAC 59 4897284 4897304 CATGGGTAACACATTTCTCCA 58 NA Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 1 1 1 123 3R 4834627 4834703 GATAGCTGCGGTACGTAGG 59 4834790 4834808 CTTATCCACCAGACGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 1 2 2 124 3R 4576580 4576598 ATCATTCTGGGTAGTGCCG 59 4576408 4576426 ATCATGAGCGTGAAGAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9630 FBgn0037561 FBtr0081866 1 1 1 60 3R 4095399 4095417 GAGGCTGTTACTGGTAGTG 57 4095357 4095375 GGAGGATTTCTAGCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300684,FBtr0300685 2 2 2 81 3R 3745625 3745646 GCTCTGGTGAAATTAACAACTG 58 3745505 3745586 CTTTCATTGTCGGCATATTCAC 58 NA Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 1 1 1 135 3R 3737337 3737432 GTTGCGTAAATCAGCAGCA 59 3737220 3737238 ATTCCATGCTGGAGGTCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 alpha-Est2 FBgn0015570 FBtr0081540 1 1 1 80 3R 3369164 3369186 GGATTACTTCATGAAGAAGCCAG 59 3369220 3369632 TCCTTTAGACTGAGAAATCCTAGTG 59 NA Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 3 1 1 60 3R 3244798 3245110 AAATCCAGGGTTGTGATGG 57 3245134 3245152 GGGAAATTGGACAATTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 1 1 1 85 3R 2886704 2886777 AAGAAATTCTCAAGCCCGA 57 2886823 2886844 CTTGATCACATGAATCACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Edg84A FBgn0000552 FBtr0081688 3 1 1 80 3R 2510226 2510305 GCATGTTGGTTAAGACTGC 57 2510349 2510367 TTCCAGATGATTTCGCTGG 57 NA InUTR Drosophila melanogaster 61 dpr11 FBgn0053202 FBtr0081704 1 1 1 100 3R 2357494 2357675 AATAAATGGCGAATCGTCGG 59 2357413 2357431 TGAGGATGACGCTAAGCAG 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 3 2 2 89 3R 2191998 2192077 TCGAATGATTTCCAAGTCGA 57 2191928 2191946 TCTAGTGGTACTAAGGCCC 57 NA Drosophila melanogaster 61 Osi20 FBgn0037430 FBtr0081708 3 1 1 168 3R 2166285 2166303 TTTGATCTGGAGTTGCCCA 59 2166498 2166519 CAATCTTGGACAGAATCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31556 FBgn0051556 FBtr0078612 1 1 1 101 3R 2134651 2134950 TACGACACAAGTTGGAATTGC 59 2134570 2134588 ACCACAACAGAGTCATCGA 58 NA Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604,FBtr0078603 1 2 2 60 3R 2113823 2113841 CGCTATAACGAGAGCTCCC 59 2113865 2113883 GATCGATGGGAGGATTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi9 FBgn0037416 FBtr0078599 1 1 1 95 3R 2086255 2086335 GTCTTGTGCATGAAGGAGC 59 2086394 2086412 CTCATCGGTCTTGACCAGG 59 NA Drosophila melanogaster 61 CG1113 FBgn0037304 FBtr0078779 3 1 1 82 3R 1080569 1080588 CTTATCATGATCCTCGTCCG 57 1080633 1080705 GTGGGATTCGTTCAAGGAC 58 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 3 3 3 124 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464550 464749 CTTGCAACAGATCTTCTACGTG 59 NA Drosophila melanogaster 61 CG32945 FBgn0052945 FBtr0078896 3 1 1 60 3R 404092 404114 CATAATGTGAGTGCCTTACATCC 59 404054 404073 CCAAAGAACGCTTCTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF3-S10 FBgn0037249 FBtr0078944 1 1 1 83 3R 259310 259428 GGCTAATGAGTTCATTGAAGTG 57 259248 259266 TAGTTCCATCGCTTGTTCC 57 NA Drosophila melanogaster 61 CG14644 FBgn0250821 FBtr0078981 2 1 1 91 3R 78083 78101 AGGAGTACCTCTCCAACCA 59 77955 78029 GATCTCCTTGATCTCGACCC 59 NA Drosophila melanogaster 61 CR34262 FBgn0085291 FBtr0112457 2 1 1 77 3L 21952869 21952946 GTGCCAGCAGATAACTACG 58 21952987 21953005 GATCTGGAAACTGCAGGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snRNA:U12:73B FBgn0041721 FBtr0075315 3 1 1 64 3L 16646869 16646891 GTGCCTCAAACTAATGAGTAAGG 59 16646915 16646933 GAAGCCAATACTGCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U12:73B FBgn0041721 FBtr0075315 1 1 1 62 3L 16646871 16646892 GCCTCAAACTAATGAGTAAGGA 58 16646915 16646933 GAAGCCAATACTGCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 3 2 3 126 3L 24530715 24535529 TTACCTGCTGAAGACATTTGG 58 24535616 24535635 CGAATCCGATAGATTGCCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG41454 FBgn0084017 FBtr0111173 3 1 1 201 3L 23131360 23132879 CAACATTCGTTGACTTTCCTC 57 23133039 23133060 ACGTATCCAGAATTTCTAGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14454 FBgn0037177 FBtr0078542 1 1 1 294 3L 22685522 22685540 ACATCTACATCCTCGACGG 58 22685246 22685264 CCACTTATCCCTGAAGCTG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 3 3 3 81 3L 22281967 22281986 AGAACGTACTGCAGAAATGG 58 22282029 22282112 AACGTGTATTTGGGCTTTCC 59 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 3 1 1 64 3L 22279933 22279951 GCTCCTCAGGCATAATGAC 58 22279822 22279908 CAAGATCTTCATTGCTCTTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Edg78E FBgn0000551 FBtr0078408 1 1 1 111 3L 21290724 21290817 ATCTGTTCTGTCTTGCTCTC 57 21290632 21290650 TACTGGTAGTTGCCCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 3 5 5 127 3L 21191818 21191988 AACATATGAGGGAGCACGG 59 21191709 21191727 TATGTCCACGCTATCCTCG 58 NA Drosophila melanogaster 61 asparagine-synthetase FBgn0041607 FBtr0089463 3 1 1 60 3L 21166634 21166652 ATTGCCACGTGATACTGGA 59 21166673 21166694 GTGATGTATTGCAGAAGATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chb FBgn0021760 FBtr0089460 2 1 3 89 3L 21166132 21171201 CTCTGTTGACGAGATTGCC 58 21171254 21171272 GGATAAAGCCATCCAGGTC 57 NA InUTR Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 3 3 3 80 3L 20989471 20989492 TTCTAACATTCGAGGAAGAGGG 59 20989353 20989431 TGTCCATATGAGTGTCCCAG 58 NA Drosophila melanogaster 61 CG3698 FBgn0037023 FBtr0078273 2 1 1 60 3L 20791174 20791192 GGAAGAGTCAGCTTAGCCT 58 20791132 20791150 GAGTAACGCTGGAACTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11399 FBgn0037021 FBtr0078277 1 1 1 104 3L 20775761 20775780 TTCCTTCCAAGTAAACCCTC 57 20775611 20775695 ACAATAAAGCTCAGAGGCTC 57 NA Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113183 3 1 2 158 3L 20710022 20710042 CTATCTGCTACTGGTTATGGC 58 20708769 20709902 CATATGCGGCAACATTTGC 58 NA Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 3 2 2 84 3L 20311906 20311983 TTTCTGAACATCACCACTTCC 58 20312027 20312047 AGTTGTTCTTGATGGGATACC 57 NA Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074901,FBtr0074900 1 2 2 67 3L 19988554 19988575 CGATGGCAATGGTGTTATAGAC 59 19988600 19988747 CTAGCATGTCATAAATTGCCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG42655 FBgn0261507 FBtr0302432 1 1 1 114 3L 19946696 19946715 TTGGATGCACAGTTATAGCT 57 19946501 19946568 AGATTAAACCAGTCCGACG 57 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920,FBtr0302047 1 2 2 142 3L 19889937 19890019 AATCAATTTACCGCCTGCA 58 19888054 19888073 CACTCGTTGTGGAAGTAGAC 58 NA InUTR Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 1 2 2 80 3L 19290533 19290622 CCACCATGAATTTGATCACG 57 19290665 19290683 ACTAGCTCCTGATTGAGGG 58 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075029 3 1 4 268 3L 19139797 19139821 GGATCTAGATTTCTTATCGAAGGAG 58 19139363 19139382 GACCTTCAGTCGATTGTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MESR6 FBgn0036846 FBtr0075026 3 1 1 86 3L 19086411 19086774 CTTTATGCAGGACATTTCAACC 58 19086821 19086839 AACCTTAAAGTCGTGCCTG 58 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075045 2 1 4 60 3L 18986002 18986025 GCTTAGAGAAACTTTATCAGGCAG 59 18985965 18985984 AGCGAGATTAGTCGATGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gk FBgn0020300 FBtr0075126 3 1 1 98 3L 18133107 18136607 CGACATAACTGAAGAGCACG 59 18136668 18136686 TTGGTCTTCAGACTAGCCC 58 NA Drosophila melanogaster 61 Ir75c FBgn0261401 FBtr0302292 2 1 1 84 3L 17814329 17814347 GACTATTCAGCAGTTGGCC 58 17814103 17814284 CGGAGAAGACACAAGATATGTC 58 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 1 3 10 84 3L 16922174 16922195 TGAGGATGTTAACGATAGTGTG 58 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 nudC FBgn0021768 FBtr0075328 1 1 1 85 3L 16802381 16802399 GTAAGCTGATGCCGAATGC 59 16802448 16812015 AATCTTGAGCTCCACCTCC 59 NA Drosophila melanogaster 61 CG13032 FBgn0036652 FBtr0075316 3 1 1 88 3L 16668566 16668587 AGGATATGATCAAGAAGCTGGA 58 16668633 16668710 AAATTCCTCCTTTCGAAACTCG 59 NA Drosophila melanogaster 61 Rpn12 FBgn0028693 FBtr0075308 2 1 1 60 3L 16576521 16576540 GGTCTGAATCTGCTGTACCT 59 16576563 16576581 CCAGTTCCGTGTGAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34248 FBgn0085277 FBtr0112442 2 1 1 247 3L 16263854 16263872 ATTTCAGGTGGTGCTCCTC 59 16263625 16263643 GAATGGAGTTGCTGTAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13068 FBgn0036588 FBtr0075464 1 1 1 260 3L 16262534 16262622 CATGTTCAAGCTGTCTGCC 59 16262846 16262864 ACTGGAGCGGTATAAGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 2 2 2 154 3L 16126325 16126398 CAAAGGGCAAAGAGACTGC 59 16126514 16126534 ACAATTTGGTTCTGTGCATCC 59 NA Drosophila melanogaster 61 CG5161 FBgn0036573 FBtr0075491 1 1 1 82 3L 16124527 16124604 GAACTAAGGAAAGAGGACCAC 58 16124465 16124483 TTCCATTTGTGCTCATCCA 57 NA Drosophila melanogaster 61 CG17032 FBgn0036547 FBtr0075511 3 1 1 119 3L 15952474 15952797 GATGATTTGCCTTCCAAGGG 59 15952877 15952897 GGATATTTGATCCAGGACCGA 59 NA Drosophila melanogaster 61 pgant8 FBgn0036529 FBtr0075578 2 1 1 92 3L 15678621 15678731 ATTTCAAGGAACTACCGCC 57 15678785 15678805 CGGAATCACTGTTAAATGTGG 57 NA Drosophila melanogaster 61 Eig71Ee FBgn0004592 FBtr0075585 2 1 1 80 3L 15649001 15649073 TGGTCTGCTTAGTGGTAAGC 59 15648940 15648960 ACGCTTTCTCAATTACCTCCA 59 NA Drosophila melanogaster 61 CG16979 FBgn0036512 FBtr0075563 1 1 1 140 3L 15569704 15569722 ACATTTACTCGGGTGGGTG 59 15569885 15569903 AAACAAGCATCCACTGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13460 FBgn0036471 FBtr0114510 2 1 1 60 3L 15054488 15054506 TCCAACAACATCTTGCCCT 59 15054446 15054467 AGGATCCATAGGATCCATAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 1 2 2 80 3L 14933333 14933351 CTCTACGTCTTTGGCATGG 58 14933393 14933474 TATGTAGCTACCTCCGTTCAG 58 NA Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699,FBtr0300190 3 2 2 81 3L 14771374 14771454 AAGAAGCACAGAAAGGACG 58 14771311 14771330 TGGCTTGTTCGATATAGTCC 57 NA Drosophila melanogaster 61 CG9384 FBgn0036446 FBtr0075690 3 1 1 81 3L 14755485 14756159 CTGCAAACAAGTACCCACC 59 14756204 14756311 CACATGACATGGCCAAGTG 59 NA InUTR Drosophila melanogaster 61 CG33260 FBgn0053260 FBtr0302436 3 1 1 93 3L 14754818 14754894 CAACGTGGATGATTACATGG 57 14754744 14754762 TTGATTAGGACTCCAGCCT 57 NA Drosophila melanogaster 61 shd FBgn0003388 FBtr0075676 3 1 1 80 3L 14612758 14612778 GGCACTAAGTGGATATTCCTG 58 14612817 14613028 TCTGTTCAAATCCGCATATACC 58 NA Drosophila melanogaster 61 blue FBgn0041161 FBtr0075781 3 1 1 82 3L 14040886 14040963 GATGACTAATGTGCGTTCCG 59 14040823 14040844 CATACTGTTCGATAACGGTGAC 59 NA Drosophila melanogaster 61 ptip FBgn0052133 FBtr0075784 3 1 1 81 3L 14015210 14015290 TCATCTGCTAACTGCTTGGA 59 14015148 14015166 AGGATCGGATAAGTGTCGC 59 NA Drosophila melanogaster 61 CG17359 FBgn0036396 FBtr0075787 2 1 1 60 3L 13992022 13992043 GAGCCATCAGTACTTTGAACAG 59 13991983 13992004 ATACTCTATATCGTCCAGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32135 FBgn0052135 FBtr0075760 3 1 1 60 3L 13960055 13960074 TGATGCCCATTAAGGTGGAG 59 13960095 13960115 GCCATATTATCTTCCGGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx13 FBgn0036341 FBtr0075886 3 1 1 90 3L 13038615 13038635 AAATAGAGTCGGACATCATCG 57 13038686 13039326 TCGATGAAATCCATCTGCTG 58 NA Drosophila melanogaster 61 CG32111 FBgn0052111 FBtr0075910 2 1 1 80 3L 12626980 12626999 TAACCGACTATACCCGACAG 58 12627042 12635161 CTGGGATTTGTAGAACCGG 57 NA InUTR Drosophila melanogaster 61 CG33725 FBgn0053725 FBtr0113471 2 1 1 94 3L 12475746 12478921 AATTCCTACAGGATGCCGT 58 12478978 12478997 CTTCAGACGACAATTGTGGA 58 NA Drosophila melanogaster 61 CG10616 FBgn0036286 FBtr0075956 1 1 1 82 3L 12465224 12465242 ATCAACTCACAGGCATTGG 58 12465288 12465656 ACAAAGATTCCGATGACGT 57 NA Drosophila melanogaster 61 RhoGAP68F FBgn0036257 FBtr0075997 3 1 1 86 3L 12134438 12134457 TTTGATGATACCGAGCTGCT 59 12134569 12134644 AAGTTCTGGATCTTCGGCC 59 NA Drosophila melanogaster 61 Grip163 FBgn0026432 FBtr0076061 3 1 1 87 3L 11989964 11989982 CTGCTAAACAACACCTCCA 57 11989834 11989916 CAGTGTTCAGGTTTAATCTTGG 57 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 1 1 1 60 3L 11788087 11788164 CCGAAGGGACAGTCAAGAG 59 11788187 11788206 GTTTCGTTCGGAACTTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Muc68D FBgn0036203 FBtr0076119 3 1 1 94 3L 11765161 11765239 GCTAGTCGTAAGAGTCCTATGG 59 11765088 11765106 CTGCTCTGGATCCAAACGA 59 NA Drosophila melanogaster 61 Sgs8 FBgn0003378 FBtr0076160 3 1 1 95 3L 11502447 11502466 AAGCAACAACCATGAAGCTG 59 11502302 11502320 ATGAACAATCCTTGCAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vha16-2 FBgn0028668 FBtr0076091 2 1 1 60 3L 11468317 11468335 GTATCCGTCCTGATAGCCG 59 11468357 11468377 GCACATAACTGTCTTCCATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12289 FBgn0036160 FBtr0076178 3 1 1 60 3L 11450907 11450927 ATACGCCTAATCCTCGATCAC 59 11450867 11450886 ACGATACCACTATCCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 3 3 3 95 3L 11168039 11168057 CTGATGATTGTCACCCTGC 58 11168116 11168196 AGGAACCGCATAGCTACTC 59 NA Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 1 3 3 93 3L 11168041 11168059 GATGATTGTCACCCTGCTG 58 11168116 11168196 AGGAACCGCATAGCTACTC 59 NA Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 2 2 2 80 3L 10630669 10630750 ATAAGAAACTGGGACGAGCA 59 10630608 10630626 ATCGTAGGGTTTAGCCTGC 59 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282,FBtr0076281 3 2 2 60 3L 10406344 10406365 ATCGATGAGGTGAATAATGTCC 58 10406383 10406404 GATTTAGGATAATACGCGTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or67c FBgn0036078 FBtr0076300 3 1 1 81 3L 10236939 10237019 ACAAGTGCCTTAAACTATGCG 59 10236878 10236896 TGCATGGATGCCATAAGGA 59 NA Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 3 1 1 120 3L 9962428 9962955 TAGCAAGCTCCGGAATGAG 59 9963038 9963057 ATATGTGCCCAATATGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Ilp4 FBgn0044049 FBtr0076372 3 1 1 169 3L 9797188 9797206 TGATTAGACTGGGACTGGC 58 9796976 9797055 ATCCTTAGACGCACTGCTC 59 NA Nonspecific Drosophila melanogaster 61 CG33700 FBgn0053700 FBtr0301069 1 1 1 101 3L 9507484 9507568 TCCTGTCCATATGATCACGA 58 9507402 9507423 CACTCTTATCATGTAATCGCCA 58 NA Drosophila melanogaster 61 Bet3 FBgn0260859 FBtr0089879 2 1 1 160 3L 9432379 9432399 TTCTCCCTGGTATTCGATAGC 59 9432141 9432257 TTCAGTTGATCCTGCACGA 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076435 2 2 4 156 3L 9327884 9327902 CAAATCCAGCTATCCAGCC 58 9328022 9329824 TTGCTGTTGATTCCTGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 1 5 5 80 3L 8780759 8780777 GGTCTGATTTCGAAAGCCA 58 8780818 8782057 CTGATCGACACTAGAAGATCTG 58 NA Drosophila melanogaster 61 CG13306 FBgn0040828 FBtr0076592 2 1 1 169 3L 8742806 8742825 AAAGAACTGCCGTAAATGCG 59 8742599 8742617 TCAGGTAAACGACCGTCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 2 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727349 TGGACAAGTTCTTGACTTCG 58 NA Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 1 1 1 70 3L 8592864 8592946 GTCTGGTCATCTATTGCCG 58 8592812 8592830 TATTGAACCATCTCGCGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8038 FBgn0035831 FBtr0076763 2 1 1 60 3L 7971155 7971173 AGTTCACCATATTCGGGCA 59 7971113 7971132 ATCTTCTTAACGCTTCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851,FBtr0089849,FBtr0089850 3 3 3 96 3L 7630567 7630795 TTCCCGATCATAAGAATCTGGA 58 7630852 7630870 TTGGTAGCCGAATCACCTG 59 NA Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833 3 1 2 109 3L 7228387 7228536 GGATATTGTACTCAGTCCCGG 59 7228607 7228625 GAGGACAGGCACTGTACAG 59 NA Drosophila melanogaster 61 Mis12 FBgn0035725 FBtr0076936 2 1 1 80 3L 6962014 6962032 GGACTTCAATAGCCTAGCC 57 6961889 6961970 ACAATATGTTCGCGCTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Glu-RI FBgn0004619 FBtr0076982 2 1 1 80 3L 6617729 6617748 CTGGCCGGAATTTAGTTCAG 59 6617790 6619533 TCGAAGATTGCACCTAATGG 58 NA Drosophila melanogaster 61 Lcp65Ag3 FBgn0086611 FBtr0077061 1 1 1 80 3L 6123844 6123924 AGCTTCAAATACGACTGGGA 59 6123783 6123802 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 yip7 FBgn0040060 FBtr0077038 3 1 1 72 3L 6028555 6028573 CATCATCGGAAACGAGTGG 58 6028664 6028683 GTAGTAGATGGTCACGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 1 2 2 104 3L 5798503 5798580 GAGATCCTATGGTCGGTCG 59 5798648 5798666 AAATTCAAACCGATCCGCC 59 NA Drosophila melanogaster 61 Ir64a FBgn0035604 FBtr0077153 3 1 1 85 3L 5372309 5372327 GTCAGTATGTTTCCGCCAC 58 5372180 5372264 CGTCTTAATCCGTAGGAAATCAC 59 NA Drosophila melanogaster 61 CG34047 FBgn0054047 FBtr0100102 1 1 1 160 3L 5099668 5099686 TACATTTGGATGCGATGCA 57 5099421 5099547 ACCACAAGATAAGTTAGCTGAC 58 NA InUTR Drosophila melanogaster 61 CG15876 FBgn0035569 FBtr0073365 2 1 1 64 3L 4694370 4694388 AAACCTCGATCCTCCACAG 59 4694324 4694343 TAAACGAAGATCTCCGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gef64C FBgn0035574 FBtr0073345 1 1 1 146 3L 4792480 4792498 GTGGAATCACGACGAAGTG 59 4792608 4793934 TAATTGGCACTTGGCTTGC 59 NA Drosophila melanogaster 61 CG32238 FBgn0052238 FBtr0073344 3 1 1 60 3L 4649939 4649958 TTGACAACATACTGTCCGTG 58 4649981 4649999 TTATTCCAACGCACATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 3 5 5 94 3L 4505302 4505411 AAGTTTGAACAGGTTCGCA 58 4505226 4505245 CGGGTAGAGCTCTTTATGAG 57 NA Drosophila melanogaster 61 CG15024 FBgn0040699 FBtr0290214 1 1 1 60 3L 4463279 4463297 GGTGAGATCTGGCAATGGA 59 4463237 4463255 CTCCAGCTCTAGTTCCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302 1 1 2 132 3L 4447467 4447485 GATTGTCCAGAGGGCTCAG 59 4447577 4447909 GATGGTTTCGTTATAGACTGGAC 59 NA Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 1 2 2 60 3L 4405802 4405822 ATGTGGTCGAAATTAAGACCG 58 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33514 FBgn0053514 FBtr0091456 1 1 1 114 3L 4365786 4365863 GATTCATCAAACGGGTGCC 59 4365939 4365959 CTCCAGCATTGTGTACTTCTC 58 NA Drosophila melanogaster 61 CG32251 FBgn0052251 FBtr0073286 2 1 1 80 3L 4318129 4318149 ACTATTTCTGTGAAGTCAGCG 58 4318188 4318271 TCTCTTTCGATTCTCATGTTCC 58 NA Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300989 1 1 2 144 3L 4069446 4069537 TATTATCCAGCACGCTTGGA 59 4069704 4069724 CCTTATTGCTACGATTTGGGT 59 NA InUTR Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 1 3 3 81 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 scrt FBgn0004880 FBtr0073165 2 1 1 81 3L 3985481 3986532 GTTTACAACGGCTACACCC 58 3986577 3986595 TCACGGTTATCTCGCTCTC 59 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 2 2 3 177 3L 3961677 3961695 GAACATCTGGAATGGTCCG 58 3959843 3959861 AAATCACCTTGCCATCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 dro6 FBgn0052268 FBtr0073080 2 1 1 62 3L 3336305 3336323 CTGATGATGGTCATCCTGG 57 3336261 3336279 TCTGTACCTTCCGGAAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 2 1 1 141 3L 3318588 3318708 TAGCCATGGTCTCTAAGGC 58 3318465 3318486 GTCATTATGGGATAAAGGACGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG12034 FBgn0035421 FBtr0073043 1 1 1 106 3L 3219318 3219336 GCTGAACATTCTGACCCTG 59 3219492 3219510 TGTCATACTTCCCGCTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073028,FBtr0073027 2 2 2 60 3L 3160741 3160759 CCGAAGATCACCTACTCCA 58 3160782 3160801 GTATAAATTGGTTGCCGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 3 5 5 88 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131024 3131119 TCTGGTTGAGAGTCGATATTATGG 60 NA Drosophila melanogaster 61 CG14949 FBgn0035358 FBtr0072949 3 1 1 111 3L 2642874 2643202 AAGAATCTCTATGTGGTCAAGG 57 2642784 2642802 CGTAGAAGGTCAGATCCAC 57 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 3 4 4 80 3L 2498023 2498107 GGAAGATGTGAAGATAAACACCG 59 2498144 2498165 TCTGAGATCCAGCGATTTACTC 59 NA Drosophila melanogaster 61 CG7991 FBgn0035260 FBtr0072765 1 1 1 80 3L 1712715 1712733 CCAGTTGCTCCGAATTAGG 58 1712774 1712852 GACAATAGGCATCCCTTAATCC 58 NA Drosophila melanogaster 61 CG7970 FBgn0035252 FBtr0072762 2 1 1 197 3L 1653241 1653321 AAATCCATTACGGCATGCG 59 1653482 1653500 GAAGAATCTTCGGAAGCGC 59 NA Drosophila melanogaster 61 LysP FBgn0004429 FBtr0072633 2 1 1 60 3L 1218647 1218667 GTGATTTGTGCTCTGACTCTC 59 1218607 1218625 AACACCTATCCATCGTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 2 2 2 91 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196955 GTCATCGTTGGGAATTAAGGAG 59 NA Drosophila melanogaster 61 CG12038 FBgn0035179 FBtr0072619 1 1 1 109 3L 994203 994289 ACTTGATGTGCCAGAAATTCG 59 994358 994378 CATATCATTCAGCGGACACTG 59 NA Drosophila melanogaster 61 CG13890 FBgn0035169 FBtr0072587 1 1 1 80 3L 851643 851661 AACGACTTGTCCCAATCCT 59 851705 851782 AACCATGGCCTTGAAAGTC 58 NA Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 1 1 1 124 3L 841145 841163 AGGAAACCGGATATCTGGT 57 840988 841057 AATCTTGAAGCAACAGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG34267 FBgn0085296 FBtr0112462 2 1 1 63 3L 500290 500371 GTTCCGCATTATCGCTGTG 59 500245 500263 AATGTAACCAGGAGCAGCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13884 FBgn0035138 FBtr0072568 1 1 1 60 3L 365910 365928 TGGAACAGATGCTCCACTG 59 365868 365888 CTTGTTATTATCCCGTCGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 3 2 2 83 3L 268393 268411 GGAGAAGTATGGGAGGAGG 58 268457 268579 ATATCGACAAGACAGACCGT 58 NA Drosophila melanogaster 61 Kaz1-ORFA FBgn0063924 FBtr0091791 1 1 1 60 3L 216716 216735 ACTTATTCAAAGCCACCCTC 57 216758 216776 TGCATTGGAGCCTAGACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A2589b FBgn0086024 FBtr0114300 1 1 1 83 2R 17215793 17215811 CTGAAACGTTGTTGTGGTC 57 17215858 17215876 TAAGCATCAGGCAAATGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1180 FBgn0086658 FBtr0091640 1 1 1 61 2R 7478956 7478974 ATGTCTTGTCTATCGCGCA 59 7478913 7478936 GCAAGTTACTAAATGCTCTAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0110899 3 1 2 93 2R 21072173 21072241 CTTCACACTCTTGGCATCC 58 21072098 21072116 GCACGATCTGTTTCAAGCA 59 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 3 3 3 135 2R 20853307 20853383 TACTTCGGGAATTCAGTCAC 57 20853191 20853209 CAGGTACCGTTAGTTCGAG 57 NA Drosophila melanogaster 61 CG4806 FBgn0260456 FBtr0072332 1 1 1 200 2R 20554636 20554714 TTGAATCGGTTTGTTTCCCG 59 20554455 20554473 ATGCGTGTCGAAGGATAGG 59 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 1 4 4 80 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300186 2 1 4 86 2R 20443017 20443035 CATGTTCTTCCGACTGGAC 58 20443083 20445561 CATTCTTGCTTGCATAATCGG 58 NA Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 2 2 2 163 2R 20422601 20422674 ATCGATTCAGGACACCACC 59 20422456 20422475 TTAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 CG13581 FBgn0035014 FBtr0072300 1 1 1 60 2R 20394821 20394839 TTATACTGTGACCAGCCGC 59 20394863 20394881 CAGATGGTACAGGAAGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 enok FBgn0034975 FBtr0072250 2 1 1 160 2R 19988259 19988338 CCATACAGGTGTAAGACATGC 58 19988520 19988538 CTCTCGATGTTGCCATCCT 59 NA Drosophila melanogaster 61 enok FBgn0034975 FBtr0072250 1 1 1 119 2R 19988259 19988338 CCATACAGGTGTAAGACATGC 58 19988477 19988497 GGAGGCATATTTATACGAGGG 57 NA Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 3 2 2 95 2R 19873907 19874869 CAATTCCCAGATCGTATACGC 59 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 CG3825 FBgn0034948 FBtr0072204 1 1 1 93 2R 19863737 19863755 GTTTACAGCATGCGGTGAG 59 19863602 19863682 GAAACGAACCTTCTTGACAGG 59 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153 3 1 3 106 2R 19858116 19858135 GGTAATTAGGGAGCGGTAGG 59 19858203 19858292 TGGTTTCATGGGTTGTTTGG 59 NA InUTR Drosophila melanogaster 61 CG5339 FBgn0034925 FBtr0072220 1 1 1 82 2R 19785292 19785311 TCATACTGTCCGAGGAACAG 59 19785172 19785248 CAACGTGACAGGTTCTTGAC 59 NA Drosophila melanogaster 61 CG42241 FBgn0250870 FBtr0290304 3 1 1 61 2R 19560818 19560836 ATTTGTGGGACGGAATTCG 58 19560861 19560879 CATTCGCCTCGTATTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5360 FBgn0034873 FBtr0072058 2 1 1 82 2R 19414160 19414178 GAGTAAACTGCACAGAGCG 59 19414223 19414346 AAAGGAGTTTCTTTCGCTGG 58 NA Drosophila melanogaster 61 CG30411 FBgn0050411 FBtr0072016 3 1 1 207 2R 19303630 19303648 ATGTTCGGGATGTTTCCGA 59 19303819 19303900 AGTTATCGCTGGCTTTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072013 1 1 4 154 2R 19274136 19274541 GAATCGTAAGACTTTGAAGAGC 57 19274656 19274674 ATGGATCCACAGCATTTCC 57 NA InUTR Drosophila melanogaster 61 vir FBgn0003977 FBtr0072037 2 1 1 90 2R 19249332 19249350 TAACCTGACAAGCGTGGAG 59 19249204 19249280 GTAGAAAGTGAAGTCGTGCTC 59 NA Drosophila melanogaster 61 CG3502 FBgn0046253 FBtr0273227 1 1 1 80 2R 19233237 19233327 AGGTGTCAGGATCATGATAGTC 59 19233178 19233197 CACCAAATAGGTTGAGGTCC 58 NA Drosophila melanogaster 61 CG3124 FBgn0034840 FBtr0072046 1 1 1 178 2R 19170822 19170840 TCAGCCTATGCAGAGTCAC 59 19170586 19170682 GTATCGATGGTGCGTTTAGAC 59 NA Drosophila melanogaster 61 CG32833 FBgn0052833 FBtr0071990 2 1 1 60 2R 18872622 18872643 AGCGATATACAAACTGAGTCAC 58 18872583 18872602 GTTCAGGAATCCATCCACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fd59A FBgn0004896 FBtr0071898 3 1 1 94 2R 18756296 18756315 TAGCTCTAATCACCATGGCC 59 18756372 18756710 GTAGTATGGAAAGCGCGAC 58 NA Drosophila melanogaster 61 RpL23 FBgn0010078 FBtr0071897 2 1 1 200 2R 18742373 18742977 AGGAAGAAGGTCATGCCTG 59 18743139 18743159 TATAGAGCTTGCATTGGATGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG30272 FBgn0050272 FBtr0071890 2 1 1 80 2R 18717720 18717738 TGGCCAAGTTTAATGCTGG 58 18717779 18717857 AATCGTACTCTGGAAAGTTTGG 58 NA Drosophila melanogaster 61 CG13526 FBgn0034774 FBtr0071878 3 1 1 60 2R 18642865 18642883 GCATATCGACGAACTGAGG 58 18642907 18642925 TAATGTGCCATTCGAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4752 FBgn0034733 FBtr0071832 2 1 1 81 2R 18366314 18366335 CTATACAAGTCCGTAGTCGAGG 59 18366377 18366451 CTTTCCAGCTGTGGTTGAG 58 NA Drosophila melanogaster 61 GlcT-1 FBgn0067102 FBtr0071755 2 1 1 60 2R 17964228 17964249 AGATCAATAACATCCATCCAGG 57 17964268 17964288 TCTGAGATCATCACAAAGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11475 FBgn0034687 FBtr0071803 3 1 1 60 2R 17957612 17957631 ACAAGTGGTCACGACTACAG 59 17957571 17957592 TAATGTAGACATACAGGCAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4386 FBgn0034661 FBtr0071743 1 1 1 80 2R 17687459 17687544 ACTCTTCAGGAGGTTCAAGTG 59 17687399 17687419 GTTATCCGTGATCTTGTTGCC 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 2 3 3 80 2R 17172235 17172255 TATCTATCAGATGTGAGCGGA 58 17172297 17172371 ATACATCAGCAGAATGGGC 57 NA Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 3 1 1 283 2R 16947946 16947964 CTCAAGTTTCCGTCGAACC 58 16947624 16947700 GTTCCTTTATCCTTGCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9313 FBgn0034566 FBtr0071521 1 1 1 80 2R 16870015 16870095 CTGTTTCGGATCGCATGAC 59 16870137 16870157 GGGAATGAGGGATTCTTAACG 58 NA Drosophila melanogaster 61 CG9344 FBgn0034564 FBtr0071520 3 1 1 134 2R 16864738 16864827 GTTGACTATCGAGGTGTGC 58 16864925 16864943 GTAGAGGACATTGTTGCCG 58 NA Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0071519 1 1 2 207 2R 16831644 16832349 CTCTGGTCGTTGACAATGG 58 16832520 16832538 ATGATACCGTGCTCGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rx FBgn0020617 FBtr0071518 2 1 1 92 2R 16804839 16804860 TGGAGAAGTTCAAGAATCTGGA 59 16804912 16805970 CGTTGCTATCTTCCGTTGAG 59 NA Drosophila melanogaster 61 CG15226 FBgn0034550 FBtr0071564 1 1 1 87 2R 16679171 16679189 TGTCCACCAAATCCCAGAC 59 16677653 16679124 GAACACAGTAGAAATCCGATCTG 59 NA Drosophila melanogaster 61 CG13428 FBgn0034515 FBtr0086267 2 1 1 114 2R 16427730 16427749 AAGTTCGTCGGTTTGTTCAG 59 16427303 16427472 ATGTATCACGACGGGATCG 59 NA Drosophila melanogaster 61 CG18067 FBgn0034512 FBtr0086216 1 1 1 61 2R 16422047 16422065 GAGCTTGGATTCTACTGGG 57 16422090 16422169 TATATTCGCAGCGCTAGAC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13869 FBgn0034486 FBtr0086323 2 1 1 93 2R 16126766 16126785 GCTTTAGAGGCCAATCTCAC 58 16126629 16126712 CCGAAACGAACTTGATTACAC 58 NA Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0300422 1 1 2 83 2R 15834740 15834836 TATCAAACTCCGGAAGCAGG 59 15834882 15834900 TAAGTCGCTACTAGTGGCG 59 NA InUTR Drosophila melanogaster 61 CG15905 FBgn0034462 FBtr0086491 3 1 1 81 2R 15534920 15534940 GATTCAACATCCACGTTAGCA 59 15534771 15534877 TCGTTATACGTCTCCTCGG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0100393 3 1 19 135 2R 15353170 15353188 TCATCCAGTGACAAGGCTC 59 15353747 15353766 TAAACGTATTTGCGTTGGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpL11 FBgn0013325 FBtr0086533 1 1 1 80 2R 15330539 15330557 CATCAAGTACGATCCCTCC 57 15330601 15330833 TGGTTCACATTGTAGCCAG 57 NA Nonspecific Drosophila melanogaster 61 CG18606 FBgn0034428 FBtr0300592 3 1 1 66 2R 15175934 15175955 GGTCATACTTTCCAAATGTCTC 57 15175982 15176000 GCTGGTGATGAACAGAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rib FBgn0003254 FBtr0086512 1 1 1 80 2R 15163644 15165372 TTCATTATTTCGTGGCAACC 57 15165414 15165433 GCGAGTAGAAGGATAGATGC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086508,FBtr0086506,FBtr0086509 1 4 4 80 2R 15130613 15130636 GAACAGAAGATAACCATTCAGTCC 59 15130675 15130768 CGTCGCTTCTTGTATTGCC 59 NA Drosophila melanogaster 61 GstE10 FBgn0063499 FBtr0086726 3 1 1 60 2R 14284819 14284840 CGGATATGTTACGCAAGAATCC 59 14284780 14284798 CATGACTCACCATCCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16836 FBgn0040735 FBtr0086666 1 1 1 80 2R 14276657 14276741 CAGCTGTTAATGCTACGCC 59 14276784 14276803 TTCCCGGATCATTATCAGGC 59 NA Drosophila melanogaster 61 CG18537 FBgn0034323 FBtr0086759 3 1 1 118 2R 14183717 14183798 CTGAGGAGACAATGGTGGA 58 14183879 14183898 GTAGGAGTTGAGGTAGTCGT 58 NA Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 2 2 2 89 2R 14182691 14182765 GAGGAAACGATGGTTGAGG 58 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA InUTR Drosophila melanogaster 61 thr FBgn0003701 FBtr0086825 1 1 1 81 2R 13751944 13752020 AACAAATGTGAGCCCTCAC 58 13751881 13751899 ACCCAAACACTTCATGGTC 58 NA Drosophila melanogaster 61 CG34195 FBgn0085224 FBtr0112388 3 1 1 77 2R 13620923 13620944 GTGGAAAGATTTACCCATTGGA 58 13621043 13621062 AATAACGTCCGGTTCTAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42562 FBgn0260764 FBtr0301266 3 1 1 80 2R 13573538 13573622 TTATTCCCTGAGGATTGATCTCG 59 13573660 13573680 TTAACTTGAAGCACATCTGGC 59 NA Drosophila melanogaster 61 CG42649 FBgn0261501 FBtr0302392 3 1 1 63 2R 13486972 13486990 GATATACACCGAGGCTCCA 58 13486927 13486945 CCCTACTTCTTCCAACGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 icln FBgn0029079 FBtr0086832 1 1 1 60 2R 13478635 13478653 GCACAGTTTACATTGCCCA 59 13478763 13478781 ATACCCTCCGCCAATTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14482 FBgn0034245 FBtr0086905 3 1 1 86 2R 13460017 13460164 AGTTCCTTCATCCGATCTGG 59 13459950 13459968 CTGTAGGACCAGCTTCCAG 59 NA Drosophila melanogaster 61 Amy-d FBgn0000078 FBtr0086983 1 1 1 199 2R 13013535 13013553 GGCAGCAATCAGATCTCCT 59 13013716 13013734 ATGTAGATGGAAGCCCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NiPp1 FBgn0026402 FBtr0087058 1 1 1 88 2R 12892049 12892067 ACATCATGGAAGACCTGCC 59 12891918 12891999 TGTGAGATTATCAAGCTCCGT 59 NA Drosophila melanogaster 61 CG34459 FBgn0085488 FBtr0112765 3 1 1 110 2R 12713107 12713126 GCGAATACGTGGAGTATTGG 58 12713257 12713275 ATCATTCTCTTGTGCTGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15617 FBgn0034151 FBtr0087083 1 1 1 61 2R 12633656 12633674 CGTTCGTGTCTACGTTAGG 58 12633554 12633572 AATCGCAGGTCCAATCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087095,FBtr0087096,FBtr0087094,FBtr0087097 1 5 5 90 2R 12443213 12443232 CATACACTGTGACGAACTGG 58 12443282 12443358 TAGCTTCATCTGTAAATGCGTC 59 NA Drosophila melanogaster 61 CG8370 FBgn0034060 FBtr0087203 3 1 1 81 2R 11889933 11889951 CCATGAATGCGACACTCAC 59 11889991 11890067 CTGCTGTATATCTCAAGTATCTGC 59 NA Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 3 1 1 78 2R 11461013 11461031 CTACCAGGAGGAACCTACG 58 11460895 11460973 TTCTAGTTGCTGGAGCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087338 3 1 5 101 2R 11448719 11448737 GACAGCTAATCTGAGCGTC 58 11448883 11448902 TTTCGAATCCTTGAGTCGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir52b FBgn0050469 FBtr0273350 3 1 1 60 2R 11390867 11390885 GGCTTTGTGAACTACTGGA 57 11390907 11390927 ATGTTAGACCAAGTCTCACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8160 FBgn0034011 FBtr0087389 1 1 1 94 2R 11215667 11215742 TAATGGTTGTCCTGTTCGC 58 11215591 11215609 TGGAACGGATCTCAAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 pcs FBgn0033988 FBtr0301507 1 1 1 80 2R 10877104 10877190 TAGAAATCGAGCTAGAGGAGG 58 10877232 10877250 TGGAGGAAACTTTAAGGCG 57 NA Drosophila melanogaster 61 Cyp317a1 FBgn0033982 FBtr0087405 2 1 1 60 2R 10788209 10788229 AAGTACATTCTGGTCAAGGAG 57 10788251 10788269 GATCGTGATGGATAGCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U3-55K FBgn0053505 FBtr0091445 2 1 1 80 2R 10747000 10747019 AAAGATAGCATTGAGTGCGT 58 10746882 10746957 CCATAAACCGATTGCTCCA 57 NA Drosophila melanogaster 61 AttA FBgn0012042 FBtr0087437 3 1 1 126 2R 10635041 10635059 GTTTGGATCTGACCAAGGG 58 10635149 10635231 TGACCAGCATTGTTGTAGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG10139 FBgn0033951 FBtr0087433 2 1 1 78 2R 10533020 10533039 ACCAAGAAGCATATGAAGCA 57 10533137 10533155 CGGATGACCTGTTTAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Cpr51A FBgn0033942 FBtr0087514 2 1 1 111 2R 10402608 10402627 AAATTCGTGTTGATCGCCAG 59 10400514 10400538 CATTCTGATATTTCTCGTACTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Dh44-R1 FBgn0033932 FBtr0087485 2 1 1 80 2R 10271770 10271788 AAATGCACTGAGACACCAC 58 10271832 10272098 TTCGTGGTATAACGTCGGT 58 NA Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087557 3 1 2 93 2R 10258229 10258304 CATTCAAGCAAGTTGCCGT 59 10258154 10258173 CAACATGGGTCGAACTTTCG 59 NA Drosophila melanogaster 61 CG18327 FBgn0033904 FBtr0087522 1 1 1 88 2R 10054980 10054998 AGATCTCATTCGCAAAGGG 57 10055049 10055177 CGTCTTGATCAGGAAGAAGG 58 NA Drosophila melanogaster 61 DJ-1alpha FBgn0033885 FBtr0087615 2 1 1 86 2R 9830747 9830765 AACGCTCTGATCATCCTGG 59 9830626 9830700 AACAAGGATCTTTCCTCTTCGT 59 NA Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087648,FBtr0087647 1 2 2 99 2R 9708863 9708945 ACTATGTGAGCCAAATTGCC 59 9708783 9708801 TCGAACAGGAGATTGACCG 59 NA Drosophila melanogaster 61 CG6220 FBgn0033865 FBtr0087650 3 1 1 129 2R 9580143 9580163 CAGCCTGAACAATATCAAGAC 57 9579798 9580052 AAGCTCGTTCTGAAATCGA 57 NA Drosophila melanogaster 61 CG6197 FBgn0033859 FBtr0087623 3 1 1 80 2R 9483295 9483314 GTTTGCTGAGTTGGAAACGA 59 9483357 9483438 GGATCACAAACCTGTGAGC 58 NA Drosophila melanogaster 61 Dh31-R1 FBgn0052843 FBtr0087755 2 1 1 80 2R 9161471 9162637 TATTTCAAATCCCTGAAGTGCG 59 9161412 9161430 CCACAACGAGTTATTGGCA 58 NA Drosophila melanogaster 61 CG34315 FBgn0085344 FBtr0300287 3 1 1 80 2R 9093546 9093567 TCTTCAGCTTCCTTATATGGAC 57 9093415 9093505 CCAAAGTAAGATCCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG3955 FBgn0033793 FBtr0087780 1 1 1 147 2R 9016008 9016095 TTCATCTGCATGGTCAAGC 58 9015879 9015897 AGGAATAGAGCTTGGTCCG 58 NA Drosophila melanogaster 61 CG8569 FBgn0033752 FBtr0087940 3 1 1 109 2R 8406758 8406777 TTCAGCCATCCGTATTTGGA 59 8406849 8406932 ATAAACTGGCTGCTTCTGC 58 NA Drosophila melanogaster 61 CG34234 FBgn0085263 FBtr0112428 3 1 1 206 2R 8374431 8374450 GTTGGACTGAATTAATGCCC 57 8374244 8374262 TTTATAAACCAACGGGCCA 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Cpr49Ad FBgn0033726 FBtr0087955 1 1 1 80 2R 8279076 8279156 TCTTTGAAGCTGTTCTCCTG 57 8279015 8279035 ATAGGGATTGTATTGAGGCTG 57 NA Drosophila melanogaster 61 ana3 FBgn0033718 FBtr0087904 3 1 1 99 2R 8236019 8236099 TCAGTTGATGAGCTACTCTCAG 59 8236159 8236177 TATGTACAAGCAGTCCCGC 59 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0301874 1 1 3 80 2R 8225945 8226050 AATACTTAGGCAACATACACGC 59 8226088 8226109 TTGGTATGGAAGCTATTGTTGG 58 NA Drosophila melanogaster 61 pds5 FBgn0260012 FBtr0087974 3 1 1 80 2R 7917844 7917863 ACCACTCTAAGGAGTTCACG 59 7917906 7917988 GATCTGGAAGCAGTTTGGC 59 NA Drosophila melanogaster 61 ERp60 FBgn0033663 FBtr0088058 3 1 1 80 2R 7776124 7776147 GAGTCATCTTCCATTAAGTTCGAG 59 7776003 7776087 CACAAGACCATGGAAGTTCTC 59 NA Drosophila melanogaster 61 TwdlBeta FBgn0033658 FBtr0088062 3 1 1 64 2R 7750689 7750708 TGTATCCTCCTTCTCTTGGC 58 7750644 7750662 GATCTAGGTGGTTCCGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12384 FBgn0033624 FBtr0088155 3 1 1 132 2R 7246479 7246497 ACAACCAAATCTTGTGGCC 59 7245768 7245850 AATGGGTTGTGTCAGTCCA 59 NA Drosophila melanogaster 61 CG13202 FBgn0033623 FBtr0088157 2 1 1 69 2R 7243842 7243865 CTGTTTATAGCACTCAGAACTACG 59 7243735 7243753 GTCACTGGACGAAGATGAG 57 NA DesignNoJunction Drosophila melanogaster 61 gammaTry FBgn0010359 FBtr0088159 1 1 1 60 2R 7237046 7237064 GTCCTCCTTCAAGAACCAC 57 7237004 7237022 GATGGCAATGTCGTTGACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 2 2 2 72 2R 7157767 7159891 TCTTAAGTGGGCTCTGGTG 59 7157713 7157733 GGGCAGGTATTTGTTATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Cpr47Eb FBgn0033598 FBtr0088112 3 1 1 60 2R 7143137 7143155 GATGAGCAGAAGTATCGCA 57 7143176 7143197 CTACAGCAACTTCCTTATTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34224 FBgn0085253 FBtr0112417 1 1 1 60 2R 7124915 7124933 AGAACCGAGAAGCAAACAC 58 7124873 7124893 TATTGCTTTCTGGTACCAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13230 FBgn0040764 FBtr0088204 1 1 1 95 2R 7042473 7042491 TCTGTCTGGTCCTTGTCAG 58 7042547 7042648 TGTAAGCGTCGATTATCTTCTG 58 NA Drosophila melanogaster 61 CG13231 FBgn0033580 FBtr0088203 2 1 1 265 2R 7033874 7034025 TGAAATTCACTCTGCTGCT 57 7034254 7034272 ATAGGACACCGAAGACACC 58 NA DesignRelaxed Drosophila melanogaster 61 mthl13 FBgn0050018 FBtr0088220 1 1 1 80 2R 6679252 6679273 CTGCTAATAACATCGTTCTGGG 59 6679313 6679390 GGTTCCGTTCTTGTACAACG 59 NA Drosophila melanogaster 61 CG17765 FBgn0033529 FBtr0088274 1 1 1 80 2R 6368035 6368603 AAGCTGATGATAAGCATGTTCG 59 6368640 6368662 GATGTAGTTGTAGAGCTTCTCGA 59 NA Drosophila melanogaster 61 Ir47a FBgn0033515 FBtr0088323 3 1 1 60 2R 6266507 6266528 CTACCCAAGAGGAAATTATCGG 58 6266468 6266490 CCGGTTATTGGTAAGTCTATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088357 1 1 2 87 2R 6242782 6243014 TCTTCTTAGACAGCGATTCCA 59 6242715 6242733 TCGGTACGCTTACAACAGG 59 NA InUTR Drosophila melanogaster 61 CG18011 FBgn0033491 FBtr0088332 2 1 1 80 2R 6030636 6030710 GCATGAGGATGTTATGGATCC 58 6030750 6030770 GCTTGAGCTACCAATCTAGAC 58 NA Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 2 2 2 82 2R 5955387 5955458 GGCTGCATTAAAGTTGCTG 58 5955323 5955343 AAAGTAACCATCTGTGGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088429 2 1 2 95 2R 5955812 5955886 GGAATTGTCTATCGCGCAC 59 5955735 5955754 ACTAATTGGCAGACCATCCT 58 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 3 2 2 119 2R 5937146 5937272 AGAGAATCTTCCCTTCGGG 58 5937354 5937373 TACTTCTTGAGCAGTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088443,FBtr0088447,FBtr0088445,FBtr0088446 1 5 5 89 2R 5806136 5806226 ATATGCAGATCAACGACAGAG 58 5806067 5806085 AAGGAATAGCTCGTGAGGG 58 NA Drosophila melanogaster 61 CG12923 FBgn0033461 FBtr0088379 1 1 1 60 2R 5775742 5775760 CGACGAGCTGTAAGAATCC 58 5775784 5775802 TGTTGTGCATTGTAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1667 FBgn0033453 FBtr0088479 2 1 1 83 2R 5731852 5731870 TCAAACTTTCACTGCCCGA 59 5731911 5731987 CGAAGGTAACATTATTCTTGTCCTC 60 NA Drosophila melanogaster 61 CG1665 FBgn0033451 FBtr0088478 3 1 1 115 2R 5728363 5728454 AAACGCTCAGAAGCTATCG 58 5728533 5728551 CTTGTCCTCCACATACACG 58 NA Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088494 1 1 2 65 2R 5700259 5700277 TTAGCATTCAGAGGGCCAG 59 5700153 5700233 GAAGTTCTTCAAGGAAGTTTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42600 FBgn0261016 FBtr0301879 3 1 1 80 2R 5484788 5484860 AAGCTATTTGGTGATTGCGA 58 5484727 5484748 TGCTCATCTTGTTTGTAGAGTG 58 NA Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 3 2 2 98 2R 5474093 5474165 GGATATCGCTGCACAACTC 58 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 1 5 5 80 2R 5066161 5066179 GGTTGGTTTGAGACATCCG 58 5066038 5066123 GTTGATGAGTATCTTATTCACGAGG 59 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 2 2 2 80 2R 5047800 5048139 GTTTCCATGATAGGATTCTCGG 58 5047741 5047760 GGGATTGACCACATAGTAGC 57 NA Drosophila melanogaster 61 CG13743 FBgn0033368 FBtr0088662 1 1 1 85 2R 4938125 4938356 ATCCTGATGGTCAGATGCG 59 4938058 4938076 TAATAGCCGTACTTGCCGT 58 NA Drosophila melanogaster 61 mus205 FBgn0002891 FBtr0088831 2 1 1 81 2R 3687576 3687658 CTCACGCGTAAATGGATGC 59 3687701 3687721 GGCCGTTGACTATTATGAAGG 58 NA Drosophila melanogaster 61 CG11107 FBgn0033160 FBtr0088966 2 1 1 80 2R 3275863 3275885 ACCAGAAAGAGATTACCTAGAGG 58 3275921 3276222 AGGATATCACCCTCAATTTCCTC 59 NA Drosophila melanogaster 61 Tsp42Ee FBgn0029506 FBtr0086180 3 1 1 80 2R 2900612 2904526 CATTGTGTCGGTTATCGGC 59 2904567 2904588 CCATTAACTTCAACTACACCGA 58 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 3 2 3 80 2R 2880546 2880631 ATAACGCTCCAAGTGTTATCC 58 2880670 2880691 TCCAGGAAGTTACATAAGTCCT 58 NA InUTR Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 3 4 4 161 2R 2515178 2515258 CATCAAAGTACTCACTATACAGGG 58 2515040 2515058 GAATCAGGATCATGCCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG40127 FBgn0058127 FBtr0111266 3 1 1 91 2R 75327 75347 CCCTCATTGAGGACTTACCTC 59 75189 75278 GTAGGCATTCTGATTGTATGCTC 59 NA Drosophila melanogaster 61 CR12628 FBgn0042701 FBtr0085952 2 1 1 60 2L 22226288 22226310 GGGATCAATATGCTGTTGATGAG 59 22226330 22226348 AGGTCTTCGTCTTGAAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33318 FBgn0053318 FBtr0089857 1 1 1 115 2L 20924055 20924073 AGGAGAGCCAGTGATTGTC 59 20924209 20924227 CACGTCTGCGTATAACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Cht3 FBgn0250907 FBtr0111127 1 1 1 87 2L 22908703 22908778 CTTGTGGTGGTAGTCTTGG 57 22908634 22908655 CAGGTTTATAGTTGGATTCCGA 58 NA Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085906 2 1 2 108 2L 21829828 21829846 TCGAGATCTACAGACAGGC 58 21833430 21833448 GAGTTTGAGTCGTGTGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14397 FBgn0032914 FBtr0300444 3 1 1 197 2L 21094451 21094469 GACGATGGTGGGTCTATCC 59 21094630 21094713 CGGTCATAAACCACCTCCT 59 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 1 3 3 98 2L 20688521 20688542 TCCCTCTACGAATATAATGGTG 57 20688325 20688464 CGAGTTGTAGTTATGTTGCTG 57 NA Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399,FBtr0081401 3 2 2 60 2L 20680747 20680767 GACCATAATCCAAGACAACCA 58 20680707 20680725 CTCATTGGCACTGTTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2611 FBgn0032871 FBtr0081387 3 1 1 131 2L 20650448 20650542 TATCGGTGGCATTGTTTGC 59 20650637 20650655 ACATAGTAGCTTCCCGGGA 59 NA Nonspecific Drosophila melanogaster 61 CG13970 FBgn0032851 FBtr0089388 1 1 1 60 2L 20103854 20103875 TGACCTAGATGATCTGGATGAG 58 20103815 20103833 TAGACCCACCAATCTTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10195 FBgn0032787 FBtr0081286 2 1 1 81 2L 19483472 19483490 GGAACGACCATGTTCTTGC 59 19483345 19483429 GAACATAGAAGTCATCGCCAG 59 NA Drosophila melanogaster 61 Top2 FBgn0003732 FBtr0081287 2 1 1 120 2L 19451820 19451839 GCTCTGCAACATATTCTCCA 58 19451662 19451737 GTCCTTGATCTGCACATCG 58 NA Drosophila melanogaster 61 l(2)37Cg FBgn0086447 FBtr0081161 1 1 1 67 2L 19133144 19133167 GAGCCATAGATATACTTAAACGGG 58 19133100 19133121 CGTAACGATTGTATGATCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42502 FBgn0260228 FBtr0300635 1 1 1 93 2L 18810679 18810831 TGAAGCAAGCAAGATTGGG 58 18810604 18810625 AGGGTGAGTACTTTAAGTTCCT 58 NA Nonspecific Drosophila melanogaster 61 CG42627 FBgn0261350 FBtr0302268 1 1 1 80 2L 18672281 18672352 GAGGGCAGTAGTTTGACTG 57 18672219 18672241 CATTAGTCTCTGATCCATACAGC 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0100316,FBtr0100313,FBtr0081018,FBtr0081020,FBtr0100314,FBtr0081019,FBtr0100315,FBtr0081016,FBtr0081017,FBtr0081013,FBtr0081015 1 12 12 80 2L 17709614 17711231 ATACGTGTTGAGAACAACGG 58 17709553 17709574 TTCATCATTAACATCCTCGAGC 58 NA Drosophila melanogaster 61 CG31810 FBgn0051810 FBtr0080925 1 1 1 80 2L 16850207 16850225 TCAGGGTCTTAACCTGGTG 58 16850082 16850166 TTATATTGGCTCCCAATCTCGT 59 NA Nonspecific Drosophila melanogaster 61 c(2)M FBgn0028525 FBtr0080830 2 1 1 80 2L 16303995 16304013 AGATGCTATCCGAATGCCA 59 16304053 16304134 GTTGTTCAATAGACTCGTTCAGG 60 NA Drosophila melanogaster 61 CG4793 FBgn0028514 FBtr0300612 2 1 1 75 2L 15923571 15923591 TAATCAGGGATGTGAATCTGG 57 15923689 15923707 ATTGTCAGCCTGTACTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Tektin-A FBgn0028902 FBtr0080788 2 1 1 69 2L 15854689 15854707 CAAGCCACTCAGAATGGAG 58 15854831 15854849 ATTCCGCAAGTCATCTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31827 FBgn0051827 FBtr0080759 2 1 1 67 2L 15705312 15705430 TTGAAGAGCTAAAGTGCGG 58 15705458 15705479 CCCTTCGGTAACATTAAATTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15254 FBgn0028949 FBtr0080783 1 1 1 126 2L 15614672 15614690 AGCTGGCTATATTGAAGGC 57 15614508 15614582 ATGCTCGGTGTCAATATCG 57 NA Drosophila melanogaster 61 sna FBgn0003448 FBtr0080739 1 1 1 60 2L 15477934 15477954 GAGGAGACCCAGGATTATCAG 59 15477894 15477915 TTGAAAGGTTCAGCACATAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31828 FBgn0051828 FBtr0080742 3 1 1 122 2L 15370783 15373080 CAACAGTGCTGCTATTGCC 59 15370679 15370697 AATTTCTCAATGCTCGGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG15262 FBgn0028852 FBtr0080733 1 1 1 60 2L 15299045 15299066 CACAAGTATGAACATTTCTGGG 58 15299081 15299105 CGTGATATAAGTAGTTGGGATTGTC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 1 4 4 80 2L 15266639 15266657 ATCGTAAGCACGAGATCGA 58 15266508 15266598 CTGATACTAGCAAGTTGTGAGC 59 NA Drosophila melanogaster 61 CG4500 FBgn0028519 FBtr0080591 3 1 1 65 2L 14028074 14028092 CTGAACACCAAACAACGCT 59 14028283 14028301 GCCAATATTTAGCGTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 p38b FBgn0024846 FBtr0080534 1 1 1 78 2L 13780700 13780718 AGCGTTGTTGTCCAATCAG 59 13780760 13780880 CGGCCTCAACATTGATCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9263 FBgn0032530 FBtr0080515 1 1 1 60 2L 13542197 13542215 ATTGGTACGGATGGATGTC 57 13541967 13541985 ATCTCAACATCGTCTTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5075 FBgn0032464 FBtr0080421 1 1 1 128 2L 12979934 12979954 CAATTCACCACTCTTGACTGG 59 12980044 12980125 TATTTGGACAGGGCCTGTG 59 NA Drosophila melanogaster 61 ACXA FBgn0040510 FBtr0080415 2 1 1 80 2L 12921207 12921279 TATTTGAAGGCCAGATGTAAGG 58 12921318 12921338 AAGGGAACTGATCATCAAACG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 1 1 8 118 2L 12498562 12498580 CTCAATAATGATCGCGGCT 58 12458213 12477122 TTGACCAGATCCATTGCCT 59 NA Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 3 1 1 61 2L 12452901 12453021 ATTGGAAAGGCGTGATGTG 58 12452858 12452876 ATGTCCGAGTTACAATGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Pkd2 FBgn0041195 FBtr0080365 2 1 1 82 2L 12401343 12401362 AAAGAACATGACACCAGCAG 58 12401463 12401538 GGTTATTGAGACGAACCATATCC 59 NA Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290240 2 1 2 118 2L 12207893 12207914 CTGTTTGCCGATTGTAAATAGG 58 12208048 12208069 GCGTTGAAGAAGAGAACTTCTC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 prd FBgn0003145 FBtr0080298 3 1 2 85 2L 12085079 12085473 TACCATGCAAGACATGAACAG 58 12085014 12085032 TATTGTTGGGCAAAGGACG 58 NA Drosophila melanogaster 61 CG6770 FBgn0032400 FBtr0080306 3 1 1 60 2L 12045947 12045965 CCCACTTCGATGAGTACGA 58 12045905 12045923 TGTCCAGAGAAGATGTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4983 FBgn0032371 FBtr0080253 2 1 1 81 2L 11652561 11652639 CCGAATCAGGAAATTGCCA 58 11652681 11652702 CACATTGAATGGATTGAAGGGT 59 NA InUTR Drosophila melanogaster 61 CG5198 FBgn0032250 FBtr0080026 2 1 1 83 2L 10436115 10436136 CCAGAAAGTGAAAGAGGAATCC 59 10436178 10436257 AGGTATTCCCTTTCGTAGTCG 59 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 2 1 1 122 2L 10426577 10426598 CCACTCGATTTATTCTTCATGC 58 10426107 10426494 GTTGTTCTTGCCGATCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4804 FBgn0032178 FBtr0079938 2 1 1 80 2L 10063644 10063723 GAATGCCACAGAATATAAGCCC 59 10063762 10063782 AAGAAGAATGGATGGTCAGCT 59 NA Drosophila melanogaster 61 CG5885 FBgn0025700 FBtr0079900 1 1 1 87 2L 9917857 9917941 TCCAATCTGGCTCTTCTGG 59 9917788 9917806 ATAAGTACTAGCGGCCGTC 59 NA Drosophila melanogaster 61 CG4017 FBgn0032143 FBtr0079867 2 1 1 74 2L 9767733 9767751 ACGGTTATGTCTACACCCA 58 9767843 9767861 CAACGCAGTTCTTGTCCTG 60 NA DesignNoJunction Drosophila melanogaster 61 Cyp4e3 FBgn0015035 FBtr0079925 2 1 1 80 2L 9749082 9749164 CCAGGCATTCAGAGATATGTG 58 9749022 9749041 AAACTAAACACGCGATTGGA 58 NA Drosophila melanogaster 61 CG31710 FBgn0051710 FBtr0079849 2 1 1 60 2L 9703278 9703297 GAATCAGTGCAATGAACAGC 58 9703148 9703166 GGACTGGGCTTTATCTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG13113 FBgn0032126 FBtr0079832 1 1 1 60 2L 9544598 9544616 CAAGTGCCAGTTAAACCGA 58 9544639 9544658 GCTTCCTTAGTTTCTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18661 FBgn0040964 FBtr0079763 3 1 1 60 2L 8998077 8998096 CGACTACATGTTCAACTCGA 57 8998119 8998137 TAGTCCAATGGAGCAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32984 FBgn0052984 FBtr0079758 2 1 1 89 2L 8965354 8965432 CGGATCACTACGATAGGATGG 60 8965483 8965501 TACACTCCACCAGCATTCC 59 NA Drosophila melanogaster 61 CG9515 FBgn0032077 FBtr0079791 1 1 1 80 2L 8942553 8942573 GACGTATACTTTGGCGATCTG 59 8942437 8942512 AGCACCAGCTTTATCTAGGG 59 NA Nonspecific Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 2 2 2 86 2L 8712294 8712397 TTTCGCAGCAAGAATACCTC 58 8712227 8712245 TATCCAATACGGGCAGACC 59 NA Drosophila melanogaster 61 CheA29a FBgn0053194 FBtr0079676 1 1 1 60 2L 8477382 8477400 TAATCCTGTGGACGGTCTC 59 8477476 8477496 CGACTGATGAACTTCTTTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Chrac-14 FBgn0043002 FBtr0100267 1 1 2 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 2 2 2 82 2L 8391201 8391293 CGCAAAGCGACTTACAAGG 59 8391137 8391159 CCTTGTCACCAAACTTTAGAAGG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567,FBtr0079574 3 9 9 83 2L 8107166 8107248 GACCTTTGCCAATGTAACG 57 8107295 8107313 AGAATGGCGTTAGGAACAC 57 NA Drosophila melanogaster 61 poe FBgn0011230 FBtr0079545 2 1 1 80 2L 8071495 8071515 ATACTTAACCGTACAGGAGCC 59 8071254 8071453 AAAGTCATGTTCGCATCGC 59 NA Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300459 2 1 2 91 2L 7257557 7257707 TGAGTGAGACAACAAGGTG 57 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300459 1 1 2 91 2L 7257557 7257707 TGAGTGAGACAACAAGGTG 57 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028,FBtr0079405 1 2 2 87 2L 7183803 7183879 CTATGATCCCAAGTCTGTTGG 58 7183928 7183946 GATCAGTCCGTAAGAGCCT 58 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079399,FBtr0079398 3 3 3 124 2L 7051532 7051550 AAACCGATCTCAAGGCCTC 59 7051637 7051770 GGTGGGAGTGTCAGTATCTG 59 NA Drosophila melanogaster 61 neuroligin FBgn0031866 FBtr0079344 2 1 1 80 2L 6901408 6901427 AAGAACCAATCGGAAGACTG 57 6901470 6902260 ATCATCGGTGTTACGTCTC 57 NA Drosophila melanogaster 61 ppk14 FBgn0031803 FBtr0079252 2 1 1 139 2L 6355667 6355685 ATTGTCTGGCATTCAACGA 57 6355788 6355904 CACTGTTAGCCAGAAACCC 58 NA Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079207 1 1 2 97 2L 6154870 6154956 AAGCCTAGCAACAATATGTGC 59 6154793 6154811 CAAGGACTACACCAGGGTC 59 NA InUTR Drosophila melanogaster 61 CG13999 FBgn0031753 FBtr0079150 1 1 1 110 2L 5956023 5956099 CTCTTTGTCACTCAGGATGC 58 5955932 5955950 ATTCCGCAGGATTATGTGC 58 NA Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079104 2 1 2 91 2L 5554297 5554379 CGATTTCAACCATCGTATTCG 57 5554431 5554450 GTATCTACGCAAACTGTGCT 58 NA Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0079083 2 1 5 100 2L 5277170 5277965 GTTCGATGAGCGTTCACTG 59 5277088 5277106 CGAGTTTGGGTGAAACCTC 58 NA Drosophila melanogaster 61 Cyp28d2 FBgn0031688 FBtr0079061 3 1 1 111 2L 5207869 5207887 GACGGACATGATATTGGGC 58 5207962 5208037 ATAAACGGCCTTGACTCGA 59 NA Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079045 2 1 2 276 2L 4981554 4981572 GTTGCAGTCAGAAGGTGAC 58 4981223 4981241 AAATAGCGAGCAAACGACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir25a FBgn0031634 FBtr0289979 1 1 1 80 2L 4832846 4832864 CATCGTCAAAGACGAGGAG 58 4832586 4832802 AAAGGAGCTTGCACTACAG 57 NA Drosophila melanogaster 61 Bsg25A FBgn0000227 FBtr0077423 1 1 1 188 2L 4684303 4684379 AGCACAATGATTAACCGCC 58 4684133 4684151 ATTTGCATCTTGAATGCGC 58 NA InUTR Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089268,FBtr0089271,FBtr0301863 2 6 6 172 2L 4295614 4299078 TATTCCAGAAGACGCCGTG 59 4303359 4303378 CCGGATAGCTCTCATACCAG 59 NA Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301,FBtr0077508 1 2 2 80 2L 3929491 3929782 ATGATAACCTGGTACCGAGAG 58 3929431 3929452 TGTATAGTGGTTCTTCGATCCG 59 NA Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 2 1 1 177 2L 3670377 3670461 CCAATGTGCAGGAATAAACC 57 3670219 3670237 CTTGATATTCGTCCCAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG8840 FBgn0031531 FBtr0077590 2 1 1 60 2L 3410842 3410860 GACTCTGATCGGAAACCTC 57 3410882 3410902 GTAGTCTATGTCCTTCACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 1 3 3 81 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336332 3336350 TAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 CG3347 FBgn0031513 FBtr0301033 3 1 1 133 2L 3270673 3270693 CCTGTTCTAGATACTGTTGCG 58 3270786 3270864 GTCATTGCCAAGCAATAAACC 58 NA Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 3 2 2 156 2L 2850267 2850342 ACATGAAGGATCGAGCCAC 59 2850129 2850148 ATGTGATCCTGTCCCATCTG 59 NA Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 1 2 2 80 2L 2579904 2579923 CAAAGCTGTTCCAGATGGTC 59 2579780 2579867 TCTTCAGATCATCGTTCCTATAGAG 59 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077772,FBtr0077775,FBtr0077771,FBtr0077773 1 5 5 238 2L 2455836 2455854 CTCTACGCCGAGATCATGG 59 2457779 2457797 ACCACCTGTTGACTGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15385 FBgn0031397 FBtr0077845 1 1 1 80 2L 2211711 2211784 CTTGGTCAACAGGTATCGC 58 2211649 2211668 ACCTTGTTCCAGTACATGTG 57 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 3 3 3 80 2L 2040349 2040429 TCACAGTGCTGATTACACC 57 2040473 2040491 CAAGCATGGCATCTTTACG 57 NA Drosophila melanogaster 61 CG15353 FBgn0040718 FBtr0077863 3 1 1 179 2L 2007043 2007142 TGAAGCTGGTACTCCTCCT 59 2006882 2006902 TCGGTGAATCCGGATATTGAG 59 NA InUTR Drosophila melanogaster 61 CG15362 FBgn0031378 FBtr0077814 3 1 1 61 2L 1981794 1981814 AACAAGATCAGCTTTATGCCC 59 1981890 1981908 AATTCCCGAATCGCATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL48 FBgn0031357 FBtr0077882 3 1 1 61 2L 1710685 1710856 GGATTACCTGGAGTCCCTC 58 1710881 1710899 TGATCTGCACATTCAGGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG32500 FBgn0052500 FBtr0077374 1 1 1 103 X 21494388 21494406 GAGAGCTTGAAGTTCCTGC 58 21493236 21494321 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 2 6 6 239 X 15755525 15755617 CCACCATCTAACAAGAGCGA 59 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0112982 2 1 2 145 X 14195299 14195896 ACCAAACAATGCAGATGCG 59 14183415 14183433 TACTGAACTGAGGTCGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG2650 FBgn0000092 FBtr0070504 3 1 1 186 X 2587677 2587779 CTCCGAAGGATTTCCATCG 58 2587509 2587527 CTTTATCGACTCCGAGTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 2 9 9 80 4 1068496 1068516 AGGATATCTGTCTCCTGAGGT 59 1068343 1068457 TAAAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CG14508 FBgn0039651 FBtr0085406 1 1 1 268 3R 25029765 25029783 GCCATCAAAGGAGGAAGTC 58 25029334 25029352 GATTTCCAGTAAAGCCGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31089 FBgn0051089 FBtr0084942 2 1 1 80 3R 21729347 21729428 GTGAATATGACTGCTATGCCG 59 21729467 21729488 CTGTAGGTAGTGCAACATTTGG 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 3 3 3 82 3R 15676017 15676035 CTGTTTCGCAACCTAAGGG 58 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 ldlCp FBgn0026634 FBtr0083114 3 1 1 95 3R 11186150 11186168 CGTAACGTTCTATCGCCAG 58 11186019 11186092 CCAGCAATTTCTTGAAAGCA 57 NA Drosophila melanogaster 61 CG31538 FBgn0051538 FBtr0078819 2 1 1 60 3R 1102372 1102390 CCGAGGATCAGCTTATGGA 58 1102330 1102348 GCCACTGTAATATCCGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421 3 1 3 97 3L 21521991 21522072 CTTTAAGGTGACGAGGTTTCG 59 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 CG7017 FBgn0036951 FBtr0074856 1 1 1 80 3L 20204842 20205131 GAATAGAGCTAGCGGTGTC 57 20204780 20204801 GATAGGTATTCAAAGTCCTCGA 57 NA Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0075509 3 1 2 81 3L 15948345 15948366 CCATATACCTTCTTACGTTCCT 57 15948407 15948504 ATAATGGCATCCCTTAGGTG 57 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 2 5 5 120 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475544 CTGAATGCATTTGATAGCCTCC 59 NA Drosophila melanogaster 61 Oseg1 FBgn0035891 FBtr0076663 1 1 1 80 3L 8402622 8402701 CTGGATTGTTTGACGAAGC 57 8402560 8402578 GAGCGGATTGAGCTAATCC 58 NA Drosophila melanogaster 61 Cpr65Ec FBgn0035737 FBtr0076909 1 1 1 134 3L 7086388 7086479 ACAAATTCTTCGTCCTTGCC 59 7086574 7086594 TCTGGTACTGATAGGCATAGC 58 NA Drosophila melanogaster 61 CG12502 FBgn0035171 FBtr0300345 1 1 1 107 3L 869859 869946 GAGTTTCGGAGTCAGTTATCTG 58 870014 870032 CTGATCCAGACTCTCCTCG 58 NA Drosophila melanogaster 61 CG13422 FBgn0034511 FBtr0086214 1 1 1 60 2R 16414116 16414137 CGGAGATGTTCTGTACTATTGG 58 16414156 16414176 GTAGTTGTGATAGTCGACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10764 FBgn0034221 FBtr0086919 3 1 1 81 2R 13341439 13341548 TATGATCTATACGTGAGGTTGGG 59 13341586 13341607 GGTGCACAAAGACATTAATGAC 58 NA Drosophila melanogaster 61 shark FBgn0015295 FBtr0087244 3 1 1 89 2R 12087839 12087859 GCAGTACATACTGGATCATGG 58 12087711 12087788 AGATAATGCATGCCACACG 58 NA Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112616 3 1 3 89 2R 10229754 10236910 AACTTTCGATCGAATTCCAAGG 59 10236959 10236978 CTTGTATATGCCATGGTCGG 58 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649 2 3 5 156 2R 4789010 4789833 ACATATAAGCCGGAGCTGG 59 4789950 4789971 ATGTACTTCATCATCTTAGCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17341 FBgn0028906 FBtr0080598 3 1 1 87 2L 14157722 14157844 AGAATACGACTCGACCCAC 58 14157893 14157913 TTCATAGATTCGTTCTCGCAG 58 NA Drosophila melanogaster 61 b FBgn0000153 FBtr0080542 2 1 1 122 2L 13822064 13822082 TGATGGCATCTTCTGTCCC 59 13822701 13822719 AAGATAATCAGCGGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15412 FBgn0031528 FBtr0113018 3 1 1 117 2L 3374121 3374144 GTTCACCGACGATGATATTATGAG 59 3373916 3373995 GTCCATTAATAACTCCACAGACTG 59 NA Drosophila melanogaster 61 CG34406 FBgn0085435 FBtr0112671 3 1 1 114 2L 3171997 3172067 GCTTTGGACGGCATAAGTC 59 3171901 3171919 TTCAGTCGGAAGGTCATCG 59 NA Drosophila melanogaster 61 CG33543 FBgn0053543 FBtr0091509 1 1 1 123 2L 2001074 2001388 ATATAAACACCGTCAACTCGAC 58 2000972 2000990 GAGAAAGTCGGCGTTATGC 59 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0078115,FBtr0300568,FBtr0078114 3 3 3 60 2L 132948 132968 GCAGCCATTGACCTAATTAGC 59 132987 133008 AAGTGTATTCTTGCTCAATGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nup133 FBgn0039004 FBtr0084302 3 1 1 80 3R 18520002 18520085 ATTATCAGCCTTTACATCGCC 58 18520125 18520145 GTAGCTCAGAAGTTCCAAAGC 59 NA Drosophila melanogaster 61 CG34165 FBgn0085194 FBtr0112356 2 1 1 95 2L 14714010 14714028 CGATTTGAAGGTGGTCTGC 59 14714087 14714105 GAAGATGACACCCTCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3921 FBgn0031571 FBtr0077496 3 1 1 80 2L 3800320 3800340 CGCTCGTCACAATTATTGGAG 59 3800376 3800463 AGCATAGGATCATCTGACTTATCTC 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517,FBtr0080518 2 2 2 60 2L 13448753 13448771 GAAGGAATCCCACAGTCCC 59 13448711 13448729 CGAAGCGATGGTTATACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11409 FBgn0024366 FBtr0070238 1 1 1 169 X 1227555 1227573 ATACTAGCCAACGATCCGG 59 1227338 1227356 TTGTTGTCCGTGTTGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14684 FBgn0037824 FBtr0082268 2 1 1 60 3R 6532858 6532876 TTAGGCTGAAGACTGCGAG 59 6532899 6532918 AATAGCTCGGAAAGAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076264,FBtr0076263 2 3 3 80 3L 10680193 10680212 CAATTCTGTTTCCATCACGC 58 10680253 10680348 GAGCGATCATTCTTCTGATCG 59 NA Drosophila melanogaster 61 Ras64B FBgn0003206 FBtr0073212 2 1 1 199 3L 4139252 4139918 TCATCCAGAGCTACTTCGTC 59 4140136 4140154 GCTGGAATGATCGTTGAGC 59 NA Drosophila melanogaster 61 CG3663 FBgn0035044 FBtr0072323 1 1 1 85 2R 20549506 20549581 CTATATGGCCTCGAGTCCC 58 20549630 20549648 TCCGCCACTATGTATACGT 58 NA Drosophila melanogaster 61 CG30148 FBgn0050148 FBtr0086266 2 1 1 60 2R 16434927 16434945 TAAACGAGGAGTTCGACGG 59 16434885 16434903 TTGGCTTTCGGAATATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL18 FBgn0035753 FBtr0076892 2 1 1 133 3L 7234008 7234026 CACAAGTACGATCGCAAGG 59 7233816 7233834 AAACGCTTCAGGATGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 3 2 2 81 2L 20432659 20432677 GGTCACCGAGGAGATACTC 58 20432720 20441067 GGTGTGAAGAATTTGCATGTG 58 NA Drosophila melanogaster 61 CG2543 FBgn0030407 FBtr0073655 2 1 1 81 X 12506741 12506759 ATGTCTCGGGCAATATCCA 58 12506803 12507159 AACTGCTTAATGGCCAACTC 58 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 3 5 5 101 3L 1635219 1635237 ATGATGATCATCATGGGCG 57 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7453 FBgn0030991 FBtr0074666 3 1 1 60 X 19075043 19075062 TACTGGAAGTAATCTTGCCG 57 19075085 19075103 CACGGTAACAATGGGTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7423 FBgn0030982 FBtr0074704 1 1 1 72 X 18977159 18977177 GACAATCAAGAACGGCGTG 59 18977105 18977125 CTGATCGTTCACATTAAGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13005 FBgn0030794 FBtr0074334 2 1 1 154 X 16698011 16698109 CATAGTCATCGATCGAAAGCG 59 16698225 16698243 ATGGTCTACCCACTTTGGC 59 NA Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 1 2 2 63 X 16182294 16182312 TTTGTTTCTCGGCATGCTG 59 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9123 FBgn0030629 FBtr0074019 2 1 1 155 X 15235377 15235395 GAGAACGCCCATGTTATGC 59 15235181 15235258 AAGAATGAAGGTGGGTGGT 58 NA Drosophila melanogaster 61 CG32590 FBgn0052590 FBtr0073988 1 1 1 80 X 14732791 14732865 GGAATACGGCATACAAGCG 59 14732729 14732749 GAAGCCTTGATCATTTCCTGG 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 2 3 3 80 X 14142420 14142579 GAATTCCTAGCACATAACTATCCC 59 14142617 14142636 GTAAAGGCAATCCAAAGGCA 59 NA Drosophila melanogaster 61 CG11674 FBgn0030551 FBtr0073926 2 1 1 136 X 14119466 14119484 GAAGCTGTGAGTTTCAGCA 58 14119287 14119367 CTCTAGACAGCTTGATTGCA 57 NA Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 1 2 2 90 X 13644349 13644367 TAAACAATGTGCCATCGCG 59 13640810 13640828 TAATCACGCATGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32655 FBgn0052655 FBtr0073633 1 1 1 85 X 12129254 12129272 GAAGTCTCGTTGTTCCAGC 58 12129121 12129140 CTCGTCTAACATGTCCTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 2 3 5 197 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607537 11607555 ACTCGAACTGTTTGGTGCT 59 NA InUTR Drosophila melanogaster 61 CG32668 FBgn0052668 FBtr0073469 1 1 1 80 X 11053044 11053131 CATTAATGCGATCCTCCAGG 58 11052983 11053001 CCTCCTAGGATGAAGCCAC 59 NA Drosophila melanogaster 61 v FBgn0003965 FBtr0073386 1 1 1 82 X 10819165 10819277 CAAGTGGAGATACAATCACGTG 59 10819320 10819338 GATATCCAGACGAGCCACC 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 2 2 4 83 X 9893264 9893283 ATCATTGATAGCCGATCGCA 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 CG15247 FBgn0030156 FBtr0071397 1 1 1 81 X 9768867 9768885 GGAATACAAGCCAACGCAG 59 9768732 9768754 GCTCGATATACACAATTATCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17440 FBgn0030120 FBtr0071328 1 1 1 87 X 9162927 9163011 TATTTCAGATTCTGCCGCA 57 9162858 9162876 TTGAGCTCTAGATGCTTGC 57 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 2 2 2 96 X 9091371 9091389 CAAGGATGTGATCGGAGCA 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 1 1 2 129 X 8353355 8353373 CAGATGGATGCATCCAGTG 58 8353190 8353262 ATTGTGTAGCCATCCAGGA 58 NA Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 2 2 2 109 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328885 8328904 TATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 mys FBgn0004657 FBtr0071105 1 1 1 81 X 7958423 7958441 TACGAAGAGTACTCTGCCG 58 7958486 7958577 TGTGTTTCTCATTGACGCG 59 NA Drosophila melanogaster 61 CG4575 FBgn0029920 FBtr0071000 3 1 1 169 X 6844579 6844820 GAATATGGAGGCCTTTCAAACTC 59 6844949 6844967 TTCTGGCGTTCCAGATAGG 59 NA Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 3 2 2 83 X 6661146 6661227 GGATACAGCGAGGATAAACTG 58 6661270 6661290 CAAATGGTTTACAAGCTGCTC 58 NA Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0070990 2 1 2 85 X 6572630 6572648 AGACGCAAACTTCCAATGG 58 6572221 6572581 CAACGGTCTGCATTATTGC 57 NA InUTR Drosophila melanogaster 61 lin-52 FBgn0029800 FBtr0070840 2 1 1 83 X 5648818 5648894 GGATTTGCTTTCTACAGAAACC 58 5648756 5648776 AATAACGTACTACTGCTGGAC 57 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 1 4 4 80 X 5317038 5317158 AGAACACTACCAGACACCTC 58 5317200 5317219 CACTCATAGCACCAGATGTC 58 NA Drosophila melanogaster 61 mRpL33 FBgn0040907 FBtr0070655 2 1 1 83 X 4216017 4216038 TCAGTGGACATCAGTTTAATGC 59 4215892 4215974 CCTGTTGAATGTACGGATCG 58 NA Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 1 2 2 76 X 3464355 3464373 GATGAAGGTCTGTGCTGTG 58 3464413 3464716 CGATGCGAATAGGGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0070432,FBtr0301515 2 2 2 150 X 2024123 2024142 CTTACAGAATGCTGCAGGAC 59 2023931 2024013 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14786 FBgn0027794 FBtr0070230 1 1 1 87 X 1352351 1352369 CGACCTACACATCAAGCTG 58 1352221 1352300 GTCAATCTGAAAGGCTGGA 57 NA Drosophila melanogaster 61 l(1)1Bi FBgn0001341 FBtr0070119 1 1 1 80 X 524665 524742 CTCCTTTAAACAGCTACCCG 58 524785 524803 CTCAACGGCTTGTTTAGCT 58 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442,FBtr0273443 3 2 4 80 X 211949 312518 GTTTATTCGACGAATTTCCGGA 59 211890 211911 ACTTTAGTACAGTGATTGGCGA 59 NA InUTR Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 3 2 2 81 X 94979 95061 GATTCCTGAAGACACTCCCT 58 95105 95123 GATCTTAAAGCTGGTGCGG 59 NA Drosophila melanogaster 61 CR41613 FBgn0085822 FBtr0114280 1 1 1 60 U 9112802 9112822 CTGAAGATTGAGATAGTCGGG 57 9112762 9112780 AGAACGAGCACATAAACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40963 FBgn0085779 FBtr0114230 1 1 1 60 U 3653149 3653168 TATTGACGCTCCATACACTG 57 3653189 3653209 TCAGCACTAAGTCACTTTGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 1 2 2 80 4 803969 803989 GTCAACAAATCGAGATCTGCC 59 803853 803932 GGAGAATTCATTGAAGTGTCTGAG 59 NA Drosophila melanogaster 61 onecut FBgn0028996 FBtr0089104 3 1 1 92 4 624871 625639 AATAGCGGAACGAATTGGC 59 624797 624815 AATGTGAAACCTCGCTTCC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3405a FBgn0082960 FBtr0113587 1 1 1 90 3R 24427276 24427294 ATGTTCGATGTGCTTGTGC 59 24427348 24427366 GTTGATGCACGAAGAGCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-U1554 FBgn0086060 FBtr0114336 3 1 1 66 3R 22630249 22630272 GAGCCAGCGTAGATATTATATCAC 58 22630296 22630315 CTATGGTTATGCCTCTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385b FBgn0082961 FBtr0113576 3 1 1 113 3R 1422020 1422038 CGAATGGTTGCTTCATTCG 57 1421925 1421945 CTGTCCAAATGATTATTGGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon99Fii FBgn0039777 FBtr0085690 2 1 1 101 3R 26313004 26313022 ATTTGCATCAACACCAACG 57 26312921 26312939 GAAGGAGGTTACTCCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 2 2 2 80 3R 25844458 25844477 ACGCATCCTAACGAGTATCC 59 25844340 25844415 GTTGGTGATCAGAGCTTGC 59 NA Drosophila melanogaster 61 eIF2B-alpha FBgn0039726 FBtr0085508 2 1 1 90 3R 25760464 25760541 GAGTACAAGTACTCCCGCA 58 25760392 25760410 AGAGCAGGGTGATGTAGAC 58 NA Drosophila melanogaster 61 CG12068 FBgn0039695 FBtr0085481 3 1 1 60 3R 25620712 25620731 CCAGCTAAGGGACATACTGG 59 25620752 25620772 ATTGTTTATCAGTGCCGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839,FBtr0301838,FBtr0301837,FBtr0300337 1 4 4 82 3R 24347134 24347152 TTCCGGAAAGTACACTTGC 58 24347012 24347091 GTACAACAGATTGAATGGACAC 57 NA Drosophila melanogaster 61 CG13978 FBgn0039518 FBtr0085182 2 1 1 250 3R 23290751 23290820 ATAATGAAGGAGCACATGGT 57 23291032 23291051 CACCGCTTGATACTCATCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG14540 FBgn0039398 FBtr0084948 2 1 1 115 3R 21786220 21786238 GAACTTTCGCGATCTGAGC 59 21786314 21786402 CACCGAAGTAAATTACCTTGCT 59 NA Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 3 2 2 80 3R 20749880 20749899 AGAGTCCTATTGAGGTTGCC 59 20749941 20750012 GCCGGTTATTGACATTGGTC 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 1 2 2 159 3R 19779095 19779180 GAATAACGTTGTCCGCTGG 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 CG16710 FBgn0039101 FBtr0084438 2 1 1 80 3R 19508240 19508261 AGAGTGTACATATCCTTCCTGG 58 19508298 19508511 CAGATTACAAGGCGGATATTCAG 59 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0302855,FBtr0084300 3 2 2 80 3R 18503494 18503514 GGTGTTAAGCAATAATCGCTC 57 18503556 18503634 GTGTCCACAGAGAACTGAG 57 NA Drosophila melanogaster 61 CG13862 FBgn0038942 FBtr0084204 3 1 1 77 3R 18157796 18157893 TTTGTGGTGATGATGCTCG 58 18157933 18157952 TGGCTGGTCATAAAGGTAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 3 2 2 80 3R 16940759 16940777 TTTCATAGAAACCTCGGCC 57 16940819 16940988 ACAATGCGATAGATCTCTGTG 58 NA Drosophila melanogaster 61 KaiRIA FBgn0028422 FBtr0083938 1 1 1 80 3R 16477316 16477395 ATTCTGCTATGAATCTGCTGAG 58 16477257 16477278 TTGATAACAGGTCCTTTGATGC 59 NA Drosophila melanogaster 61 CG14280 FBgn0038695 FBtr0083738 2 1 1 80 3R 15084832 15084908 CGGGCCAGCATATTTATATCC 58 15084947 15084968 CTCCCGATACCTTCATAAAGAC 58 NA Drosophila melanogaster 61 P5cr FBgn0015781 FBtr0083713 2 1 1 80 3R 14855599 14855617 CGGGATGAAGTCTGTTCTC 57 14855659 14855740 TAAAGTAGACCTGAGGTTCCC 58 NA Drosophila melanogaster 61 MED17 FBgn0038578 FBtr0083558 3 1 1 85 3R 14016697 14016717 GACAGGATTTCTTTCCCAGTC 58 14016764 14016845 TTTGTCGAACCTCACCTCC 59 NA Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083617 3 1 2 118 3R 14010864 14011271 AAGGAGGATGGAAAGATGC 57 14010764 14010782 CTCTGTACGTTTAGGCGAG 57 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 3 3 3 84 3R 13953370 13956130 CATTACTGGTTCCATCGAATCC 59 13956175 13956193 ACTGCAATGTGACAACACG 59 NA Drosophila melanogaster 61 CG5220 FBgn0038471 FBtr0083391 3 1 1 112 3R 12866586 12866609 GGACAAACGAGATATCTATTACCG 59 12866677 12866753 GCTGAACACCATTTAGAATTCC 58 NA Drosophila melanogaster 61 CG14883 FBgn0038432 FBtr0083291 1 1 1 80 3R 12282428 12282522 CAGCCATTAAGAAGTGCCT 57 12282565 12282584 CGACTATTTCACCACAGGAC 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083209,FBtr0083205,FBtr0083210,FBtr0301655,FBtr0083204 2 8 8 80 3R 11780340 11780358 GGATCCTTCTTGTCATCGG 57 11780399 11780483 CGAGTCGAGAATGGTATTATCC 58 NA Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 1 2 2 91 3R 10441512 10441591 TGTCAAACCTCCTCTACATGG 59 10441643 10441662 ATTATCGTTGTCCATGTGGC 58 NA Drosophila melanogaster 61 Nsf2 FBgn0013998 FBtr0082883 1 1 1 83 3R 9663581 9663599 CAAATGCCCAACGGATGAG 59 9663416 9663536 TCCACATATTTGACCTCCTCC 59 NA Drosophila melanogaster 61 CG7091 FBgn0038099 FBtr0300278 3 1 1 92 3R 8805120 8805140 AGCAACATCCAAGGATATCGA 59 8805194 8805270 GAATGGTTACCACTGGCTG 58 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0301943,FBtr0290334 3 4 4 85 3R 8346234 8346252 CAACGTGTACAACAGCCTG 59 8345153 8346185 TGGCGTAGTATCTGTCCAC 58 NA Drosophila melanogaster 61 CG42505 FBgn0260231 FBtr0300638 3 1 1 60 3R 7857175 7857195 TAGCCTACGAATTCCATCGAC 59 7857079 7857156 CCTAAGCAACTCCTAATACGAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 1 2 2 80 3R 6839138 6845395 GTTGTTTACGGAGGCTCTC 58 6845439 6845457 TGTGTAATCGACAACGCTG 58 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 3 1 1 102 3R 6586246 6586327 AGATTGACGATATCAGTCTGC 57 6586164 6586182 TGCATTTCCATCATGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0110952,FBtr0110953 3 2 3 127 3R 6050317 6050335 TCTGCATAGCCAGCTTCAG 59 6050148 6050226 GTCATCAATGCGATGCTCC 59 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 1 2 2 142 3R 5341243 5341261 GAGCTGCGTATCAAGTCCA 59 5341068 5341137 TTCACCTTATCGATGCGCT 59 NA DesignNoJunction Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 2 2 2 80 3R 4865745 4865765 GAGACAGCCAGATTATCTTCG 58 4865804 4865900 TCTTACCGGATCCATATTTGAG 57 NA Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 3 1 1 72 3R 3597162 3597180 GATCAAGTTCCACGACGAG 58 3597049 3597127 AAGATCGTACTGAAAGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Ccp84Ac FBgn0004781 FBtr0081693 3 1 1 173 3R 2521817 2521900 CTTTCAAGCTCGTTGCTCTG 59 2521663 2521682 CATCGGGATAGACCTCATGG 59 NA Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 2 2 2 80 3R 2283140 2283222 CTCATACAGCAATCTGAACGA 58 2283264 2283282 TAGGCCATGTTGAGTTCGA 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2566 FBgn0086661 FBtr0091666 1 1 1 60 3L 18889527 18889545 AGTCAGCTGTACGGTTCTG 59 18889485 18889504 GCTCTATCACTGGTGTAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-110 FBgn0083057 FBtr0113600 1 1 1 60 3L 831969 831987 TTAGTGGATCCACACCACG 59 831927 831948 TCAGTGATCACGATTTATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14561 FBgn0037149 FBtr0078480 1 1 1 60 3L 22059320 22059340 GATATGGAGAGCGAGAGTGAC 59 22059362 22059380 CATCCGGTATTTGCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32445 FBgn0052445 FBtr0078425 2 1 1 60 3L 21633126 21633146 ACCACAGCTTCTTCAATTTGG 59 21633166 21633186 ATGTGCTGATAGAGCGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4858 FBgn0037011 FBtr0078210 3 1 1 105 3L 20520371 20520701 ATATGAGTGGGTTCGTGTG 57 20520768 20520788 GTTCCTAGATGTGGTACTTGG 57 NA Drosophila melanogaster 61 CG5282 FBgn0036986 FBtr0078233 3 1 1 126 3L 20418316 20418334 CTCGATTACGAGCCTGGAG 59 20418156 20418228 CATCTCAAAGAGCATGGTCTG 59 NA Drosophila melanogaster 61 Kap-alpha1 FBgn0024889 FBtr0074881 2 1 1 91 3L 19802027 19802045 CTACCTGTCAGATGGTCCC 58 19802099 19802185 GCTGAGGATGTAATAGCAGC 58 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 3 5 5 80 3L 19795361 19795442 GGCATGTATTTGTGGTACGAG 59 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 1 2 2 80 3L 19539057 19539245 TTGTACAGGTTCATCTGTGTC 58 19539285 19539305 GTCGATGATTATTTGTCCCGT 58 NA Drosophila melanogaster 61 CG14089 FBgn0036861 FBtr0075015 3 1 1 60 3L 19273773 19273791 TGATCACCCTCCAAACTGG 59 19273731 19273752 TCCTCTATGATCACTTCCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13724 FBgn0036707 FBtr0075214 1 1 1 60 3L 17316891 17316911 GCACGATTATCCATATCCTCC 58 17316931 17316951 TAATGCTGTGGGTATAGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 3 3 10 116 3L 16928314 16928332 TATTCACCAGAACCTCGCG 59 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA InUTR Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 1 10 12 133 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914387 16914405 ACAATAGGGCTTCTCGTCG 59 NA Drosophila melanogaster 61 CG33158 FBgn0053158 FBtr0075390 3 1 1 80 3L 16415066 16415148 GAATTCTTCAAGGAACTGGCA 58 16415188 16415208 TTTAATCGAAGCTAGCAGTGC 59 NA Drosophila melanogaster 61 CG4680 FBgn0036627 FBtr0075388 3 1 1 60 3L 16388392 16388412 TCTAGCTACTCGCTGATACAC 58 16388433 16388452 ACAACTCTATGTTCGAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 3 2 2 119 3L 16104978 16105113 GGATAGGACAGCTAATCGCA 59 16104878 16104896 TAGGTGGCATTGGTTACCG 59 NA InUTR Drosophila melanogaster 61 Z600 FBgn0004052 FBtr0075549 3 1 1 63 3L 15502386 15502406 GGAAAGTTCCAAACCGAACTC 59 15502428 15502449 CGTAAGTGTACATGCGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075648 2 1 2 252 3L 15135437 15135455 GGTGGACAACTTCAAGCAG 59 15132428 15132446 GCTGTACTCCACTGGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34429 FBgn0085458 FBtr0112730 1 1 1 100 3L 13056705 13056723 GTCTGTGTCCTGAAGAGCA 59 13056787 13056857 CTAGATGGTGTGAGCAGGA 58 NA Drosophila melanogaster 61 CG5626 FBgn0036266 FBtr0076016 2 1 1 80 3L 12198563 12198645 CTATGTTCCTACTAGAAGTTGGAC 58 12198506 12198524 GGAGCACATATGCTTGCTC 59 NA Drosophila melanogaster 61 CG17824 FBgn0036234 FBtr0076046 2 1 1 60 3L 11975349 11975369 TTGTAACGGACTAGAAGATGG 57 11975391 11975409 GTAGTATGAGCGGCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5883 FBgn0036225 FBtr0076067 2 1 1 87 3L 11937809 11937896 GGACTTCCTAGTTCTTTGGTC 58 11937742 11937760 CGGTGGCGTTTAAGTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7543 FBgn0036164 FBtr0076092 3 1 1 92 3L 11474111 11475773 GGAAGCCCTATAACTATAGCAC 58 11475826 11475844 AATCCCTCCTGTCACTACC 58 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428,FBtr0076427 2 2 2 87 3L 9490275 9490293 AAAGTCGGATACCGAGCAG 59 9490139 9490227 TTCATTATCGGTTGTTGGATGC 59 NA Drosophila melanogaster 61 Mcm7 FBgn0020633 FBtr0076585 3 1 1 81 3L 8884872 8884957 AGACCGAGAATCTATCAAGACC 59 8884999 8885017 AGATCCGTAGACGAACTCC 58 NA Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076654 3 1 2 148 3L 8514765 8514843 TTTGAGAAGCTGCTCAAGTG 58 8514636 8514655 TATGGTGTACCCTTGAAGGC 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 3 3 3 93 3L 8180668 8180922 GAACATAACTTCCCTGGCC 58 8180979 8180997 CGTGTGGTAGATCTTGTCC 57 NA Drosophila melanogaster 61 CG9953 FBgn0035726 FBtr0076898 3 1 1 87 3L 6963906 6963986 TCACCATTGACGACATCTG 57 6964035 6964055 AATAGCATATCGTTGACCAGG 58 NA Drosophila melanogaster 61 ndl FBgn0002926 FBtr0076984 1 1 1 80 3L 6587931 6588014 GTTTCACATATCTGCAAGCCA 59 6587871 6587889 AACTCTCGTCGCTCTTGTC 59 NA Drosophila melanogaster 61 Blimp-1 FBgn0035625 FBtr0077089 1 1 1 82 3L 5637720 5637843 GCCAAATGTTAAGACTGAAGGA 59 5637886 5637904 TTGGAATGCCTTCGAATGG 58 NA Drosophila melanogaster 61 CG12027 FBgn0035585 FBtr0073372 3 1 1 108 3L 5011734 5011810 GTTGATGATCTACCAGAGAACC 58 5011647 5011665 TGCCATCTTTGGCTTTCAC 59 NA Drosophila melanogaster 61 CG15014 FBgn0035532 FBtr0073340 3 1 1 60 3L 4321266 4321286 ATCTTCAGAAGAGTCCAAGTC 57 4321226 4321247 TTTGTCATTCTCAGTAGAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 2 2 2 106 3L 2154400 2154489 GAAGCATTGAGGATTGGCA 58 2154312 2154331 GGCTGTTTGAAAGGATGAGG 59 NA Drosophila melanogaster 61 CG2277 FBgn0035204 FBtr0072729 3 1 1 60 3L 1306224 1306244 CGCAAATACTTCGATTTCGTG 58 1306184 1306202 GCTGCATGGTAAAGAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34267 FBgn0085296 FBtr0112462 1 1 1 121 3L 500290 500371 GTTCCGCATTATCGCTGTG 59 500187 500205 GAACAGATTTCACCACGGG 58 NA Nonspecific Drosophila melanogaster 61 CG1231 FBgn0035134 FBtr0072546 2 1 1 60 3L 357281 357302 CTGAAACGGAGAAATTAGATGC 57 357323 357341 TACTGACCCATTGGAGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3589 FBgn0035065 FBtr0072375 3 1 1 84 2R 20672710 20672731 CTACCCAAACATAAATACAGCC 57 20672775 20672845 CACATTTAAGTCGTTGGTGC 58 NA Drosophila melanogaster 61 CG16837 FBgn0035009 FBtr0072297 1 1 1 81 2R 20362998 20363018 CCAGAAGTTCGAGGTTATCAG 58 20363061 20363150 GATCGACTGCGAATAACCG 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 3 6 6 82 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 3 2 2 89 2R 20151258 20151334 CACGATCTGAACCATCCCA 59 20151385 20151405 GTAGTAGATACGATAGCCGGG 59 NA Drosophila melanogaster 61 CG5360 FBgn0034873 FBtr0072058 3 1 1 82 2R 19414159 19414177 CGAGTAAACTGCACAGAGC 59 19414223 19414345 AAGGAGTTTCTTTCGCTGG 58 NA Drosophila melanogaster 61 asrij FBgn0034793 FBtr0071902 3 1 1 78 2R 18774704 18774722 CAATCTGGACACGGAATCG 58 18774764 18774843 CATTGAACCAGAGTCCAGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 3 1 1 168 2R 18545615 18545633 CCTCAACGGTGATCATCCA 59 18545765 18546430 CAGATGAACAGGCACAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849,FBtr0071852,FBtr0071851 1 3 4 129 2R 18188500 18195722 CTTATAGAAGATAAGACGCCAAGAG 59 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245,FBtr0086246 2 2 2 82 2R 16551360 16551448 CGCAATAATGTATCGGTAGATCG 59 16551300 16551318 AGATTGTGGTTCTCCACCC 59 NA Drosophila melanogaster 61 CG18367 FBgn0034460 FBtr0086469 3 1 1 80 2R 15524309 15524327 CTGAGACACTTCGAGAGCA 59 15524371 15524746 ACAGAAGATTTGAGGCAGC 58 NA Drosophila melanogaster 61 Rep FBgn0026378 FBtr0086462 2 1 1 94 2R 15379766 15379843 TCATAGGCACAGGCTTCAC 59 15379896 15379919 CCCGTAGTACTCATTACTATCCAG 59 NA Drosophila melanogaster 61 CG7461 FBgn0034432 FBtr0300283 2 1 1 60 2R 15193937 15193958 CGACGAGGCTATACAAATTCTG 59 15193977 15193997 TCGTTCCAATCCATTATCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 1 2 2 81 2R 14996381 14996399 GATCCAGACTATCTGCAGC 57 14996444 14996531 AACAGGTGGCAAATACCTG 58 NA Drosophila melanogaster 61 CG15115 FBgn0034413 FBtr0086597 2 1 1 73 2R 14923494 14923513 AAATATTCGTTGTACCGCGT 58 14923373 14923391 TAAATCATCGCCAGCAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 1 2 2 125 2R 14616534 14616691 AACCGCAACGTATACAATGAC 59 14616429 14616447 AATATCCGGGTTGCCAGTC 59 NA Drosophila melanogaster 61 Spn6 FBgn0028983 FBtr0086733 2 1 1 243 2R 14014788 14015373 GAGAAACTGAAGCAGCTGG 58 14015574 14015598 TCTTCTTATTCCAGATGACGTAGAG 60 NA DesignRelaxed Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 2 2 2 89 2R 13424077 13424211 TGATGAAGATCTGCTGGGC 59 13424261 13424282 TTTGGGATATTGTCCACTACCA 59 NA Drosophila melanogaster 61 Cda9 FBgn0034197 FBtr0086984 1 1 1 97 2R 13016476 13016494 TGCAAATTACCCGATTGCC 59 13016554 13016679 AAAGTGATGGTCACGAACTG 58 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087095,FBtr0087096,FBtr0087094,FBtr0087097 2 5 5 92 2R 12443211 12443231 GTCATACACTGTGACGAACTG 59 12443282 12443358 TAGCTTCATCTGTAAATGCGTC 59 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370,FBtr0087369 3 2 2 82 2R 11144981 11145001 TCTGGATCATTATTGTGTCCG 58 11145042 11145127 GAAGAAGCCAAACTTGTATAGC 57 NA Drosophila melanogaster 61 Hsc70-5 FBgn0001220 FBtr0087568 2 1 1 86 2R 10143215 10143351 TAGCATGTTCCGCAATCTG 58 10142886 10142905 ATAACAGCACCTTTGACCTC 57 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672,FBtr0087673 2 2 2 71 2R 9409618 9409831 ACTGAGAGGCAACTACCAG 58 9409866 9409884 TACTCCACACTGTCCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 2 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114539 9114557 CCGTTGAACTCATTGTCCT 57 NA Drosophila melanogaster 61 CG8771 FBgn0033766 FBtr0302596 3 1 1 81 2R 8572299 8572319 CATTTACGAATTGCTCTGCGA 59 8572166 8572256 ACACGGACCATCATCTTCC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0299846,FBtr0301766,FBtr0300527 2 5 5 80 2R 5362476 5362499 CCATAGATAGTGGCATTAACATGG 59 5362536 5362613 GGCTTTCAAAGTTGCTATGGA 59 NA Drosophila melanogaster 61 CG13955 FBgn0033412 FBtr0088551 1 1 1 80 2R 5310883 5310901 AAATGGAGCGATTGAAGCG 59 5310763 5310839 CGGAGTTCTCAATCTCCCT 58 NA Drosophila melanogaster 61 PGRP-SC2 FBgn0043575 FBtr0088709 1 1 1 60 2R 4604813 4604832 GTCTATCGGCATCTCCTTCC 59 4604855 4604873 GATCTGAGCAGAGGTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 1 1 1 60 2R 4337448 4337531 CGATGTGATCATCTATTCACGA 58 4337409 4337433 GTTGAGAACGATTACATAGAGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 Obp44a FBgn0033268 FBtr0088816 3 1 1 162 2R 4022490 4022508 CGCTGTTGCTATTCTGCTG 59 4022276 4022294 GTCGGGATAGTCGAAGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088823,FBtr0088822 3 2 2 60 2R 3985746 3985766 CTTCAAGATTCAGCTGCTGTC 59 3985706 3985724 CTCGTAGCCAGAACACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8713 FBgn0033257 FBtr0088780 2 1 1 80 2R 3983740 3983820 TATGGTCGGGTATATCCTGTG 58 3983862 3983880 CAGAAGTAGCTCCCATCCA 58 NA Drosophila melanogaster 61 ppk25 FBgn0053349 FBtr0086169 1 1 1 80 2R 2838480 2838500 ATCATTACTGAGGTGGGTCTG 59 2838541 2838726 CTGTGTTTCTAGTTTGCCGT 58 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0085939,FBtr0299904,FBtr0085938 2 3 4 80 2L 22156807 22158522 AAATTCAAGGTGCTGGCTG 59 22158566 22158584 CTGTTGTCAATGACGGGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31675 FBgn0051675 FBtr0081429 1 1 1 111 2L 20868100 20868118 AATCACCAGCGAGAAAGGT 59 20868193 20868364 CTTGATGGCGTAAGCTGAG 58 NA InUTR Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389,FBtr0081390 3 2 2 85 2L 20678068 20678086 AAAGCGACTTTGATGGAGC 58 20678132 20678213 GGTCCATTGATCGTTAAGTTCG 59 NA Drosophila melanogaster 61 CG10366 FBgn0032814 FBtr0081259 2 1 1 85 2L 19584479 19584497 TCAAGAACGAGGATTCCGG 59 19584543 19584641 ACCTCGAGTTATATTCACCCAG 59 NA Drosophila melanogaster 61 CG31697 FBgn0051697 FBtr0081250 3 1 1 60 2L 19535933 19535951 TCTTTCCTCACGAGAACGA 58 19535974 19535993 GAGCGTTTGAGTTTGTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004,FBtr0300003,FBtr0300005 2 3 4 185 2L 16657880 16657899 AATTATCGGGATGAACGCAG 58 16658116 16658136 TGCATGATGGTGGTTATTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL4 FBgn0001995 FBtr0080843 2 1 1 84 2L 16328461 16328481 GAGATGCAGAGTTCCTTAAGG 58 16328335 16328416 GGGAACATATGGTCTTCGTC 58 NA Drosophila melanogaster 61 CG18109 FBgn0028901 FBtr0080786 1 1 1 117 2L 15784160 15784245 CTTGTTAACGAGTAACTGATATCGG 60 15784320 15784338 GGTATTGCCATCCTCTCCA 59 NA InUTR Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 3 4 4 80 2L 15266640 15266658 GATCGTAAGCACGAGATCG 58 15266509 15266598 TGATACTAGCAAGTTGTGAGC 58 NA Drosophila melanogaster 61 CG42680 FBgn0261566 FBtr0302802 1 1 1 60 2L 14588088 14588106 TTGGTAATGTCCCACAGTG 57 14588046 14588066 ATTGGATAGCTACCTCCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 2 2 2 80 2L 14363069 14363087 CAAGTACCTGGACCTGGTC 59 14363131 14363214 TGGACAAAGCGGTTTAGGT 59 NA Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 2 2 2 83 2L 13351381 13351465 ATTATCGGGTTTGTGAATTCGG 59 13351319 13351340 GATTCACATACTTTGTGGTCGT 59 NA Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 3 2 2 61 2L 13309564 13309650 AATCTAGCCAGCTGGTACC 58 13309521 13309543 CTGGTGGTTCCAATATAGATGTG 59 NA DesignRelaxed Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 2 2 2 87 2L 12060790 12060876 AACAACTGTGATGAAGTAGTGG 58 12060724 12060742 CATGGATGTGTTCACCAGC 59 NA Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 1 1 1 65 2L 11695190 11695294 TGACTAGGAACGTTGAGGG 58 11695323 11695341 AAATGACGCTGTCGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31867 FBgn0051867 FBtr0080224 3 1 1 60 2L 11144883 11144904 TTGTACTGTGGATATACCTGCT 58 11144844 11144862 AGTCTCACAACAGAGACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ripalpha FBgn0032189 FBtr0079962 2 1 1 116 2L 10200226 10200300 AATCCAATTGTCCGAACTCAG 58 10200130 10200148 TACCACTCGTTGACATCGG 59 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 1 3 3 80 2L 9338507 9338591 CAAGATTGCTACCAGAGCC 58 9338634 9338653 GTGGTCACCAGACATATTCC 58 NA Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0300450,FBtr0079699 1 2 3 68 2L 8493781 8493799 CTCCTCTTCTGCCTCTTGG 59 8493077 8493749 TCCTCCATTGGATTGGCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ent2 FBgn0026585 FBtr0079290 1 1 1 60 2L 6563055 6563074 ACTGGCTGAACATCTTTGTC 58 6563097 6563115 ATGCTGTAGACGATTCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079011 1 1 2 203 2L 5055663 5055730 CGAGGACACCAATCTCTGG 59 5055897 5055915 ACCTAAGTACTAAGCGGCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 v(2)k05816 FBgn0042627 FBtr0077657 2 1 1 82 2L 3045817 3045837 GAGTTCAAGTACAACCTGCTC 59 3045881 3046965 GGGAGTCCATAGATGCCTG 59 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077775 2 1 5 119 2L 2454802 2454820 ACAGATACGTTGAGTCGCC 59 2454903 2455069 GTCGCTTGCAACTACTCAG 59 NA InUTR Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0113015,FBtr0077841 3 2 2 72 2L 2226001 2226077 GATTCTCATGATGCAGCACG 59 2225948 2225968 AAACCCATGACCCTTAATGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31928 FBgn0051928 FBtr0077929 2 1 1 60 2L 1492710 1492730 GATGGCTACAATTCCAGTGAG 58 1492751 1492770 GTATCTGAAAGGGCGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Iris FBgn0031305 FBtr0077986 1 1 1 60 2L 1133594 1133615 GATACTTCAAGAACCCTTTCAC 57 1133555 1133574 CGGCTTCATCATAATCAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13689 FBgn0031270 FBtr0078071 2 1 1 80 2L 602996 603084 TGTGGCTCAAATATACCAAAGC 59 603123 603143 AGATTCGGATTAACCTCAGGG 59 NA Drosophila melanogaster 61 Nle FBgn0021874 FBtr0078075 1 1 1 104 2L 567019 567096 TTTGAGCACTGAGGAATTGC 59 566934 566952 TAGAGGGTGTTGTCATCCG 58 NA Drosophila melanogaster 61 CG4133 FBgn0031257 FBtr0078061 3 1 1 81 2L 456456 456544 CATCATCAATGAGGCGGAG 58 456588 456607 GTCCTCCGTTTCAAATACCT 57 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 2 2 6 97 2L 15706 17065 TGCTTATCGTAAGACGGCA 59 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 1 3 10 93 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111109 112700 AACATGATACCCTGGTCACC 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 2 3 8 103 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119986 120006 CTGATTTGGGAGGTTGTACTG 58 NA InUTR Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 1 2 4 124 2L 128931 130515 AATAATCTACTGGGCACAGC 57 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078122 3 1 3 80 2L 199974 200131 CATAACACCGAATGATTCTACG 57 200171 200190 CCTCGCATTAAATGATGCTG 57 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 3 2 3 80 2L 229225 229244 CAATCTGTGCTTTGTCACCC 59 228273 229184 TCTTCGTTTATCGGCAAACTC 59 NA Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 1 2 2 82 2L 253374 253457 CTTCCATCACATCATGAATATCCG 59 253315 253333 CTTGGAATTGCACGAGCTG 59 NA Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078 3 1 2 111 2L 557662 557736 TAGCCATCATAACAGGCGA 58 557569 557587 GTCATAGATGAGCCTGGCT 59 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 1 3 3 80 2L 738260 738332 GTTAACTATCAGGACATGCCC 58 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 3 2 2 60 2L 1354590 1354609 GGATTCATTCGACTGATGCC 59 1354549 1354567 TGTTGAACGCTTTGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 2 3 6 124 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500036 1500124 GATATGTTGACTTGAGTGGCG 59 NA Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 1 1 1 106 2L 1611793 1611811 AATGCATCAGATTCGGTGC 59 1612018 1612036 CGGTTCAATTCCGATTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 3 2 4 87 2L 2793386 2793406 AAGAACCAAAGATGGAAAGGG 58 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 2 2 3 90 2L 3292518 3292537 GTGAATCGCTCATCACTCAG 58 3292289 3292466 TCTATCAAGGCTGTCTCCTC 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 81 2L 3624268 3624291 CAGCTAATTTCCAATCTAGACGAG 59 3623868 3624230 ATTCCTCGTTGATCTTTCTGC 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 3 4 9 80 2L 3887037 3887055 TTTCGTCTCGATTCACAGC 58 3884510 3886995 CTGTGACTCCTGATTCATTGG 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 1 5 6 80 2L 4192682 4192703 ACCTTAAAGACAACAACCACAG 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 1 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343807 4343825 AGTAGAAGGCCTTCAAGGA 57 NA Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 2 2 2 60 2L 4434737 4434858 TATGGAATGCTGTTTACGTGTG 59 4434876 4434897 AATCCTTAAAGTGACAGTGCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077399,FBtr0077400 1 4 6 80 2L 4912768 4925837 ACAGCCAAACGAAGTAACAG 58 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 3 1 1 87 2L 4968460 4968478 TTGTCCCGATGAGCTAGAG 58 4968328 4968347 GATAAAGATGGGCTGCACTG 59 NA DesignNoJunction Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004 1 1 2 148 2L 5039893 5039911 AACCTACAGGATCGCTGTC 59 5040023 5040133 TCCAGCTGATTCACCTGAC 59 NA Nonspecific Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 2 3 3 83 2L 5539760 5539780 ACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 3 1 2 116 2L 5765981 5766000 ATCAGTGCTCTATTGTGCGT 59 5764195 5764213 CTCAATGTAGGCATCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079146 3 1 3 97 2L 5947246 5947264 CCTGTTCACGGCTATTCAC 58 5947323 5947867 TGGACGTATCCATATGCTCAG 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079359 3 1 5 184 2L 6963548 6963646 TTGTTAGAGAAACACTTGCCG 59 6963384 6963404 CCTGCCTCGTACATAGTATCC 59 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612 2 1 3 146 2L 7132842 7132860 ATCAATTGCAGTTGCTGGC 59 7118914 7132736 CAGCACTTACATCATTATCCTCC 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 2 3 3 85 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227333 7228704 CGTTTAATGGGAACCTGGC 59 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079436 2 1 2 80 2L 7383687 7383706 CAAAGATCCTCGTATCCTCC 57 7383748 7383818 ATCCTCAGAGTTATCACCCT 57 NA Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 2 2 2 89 2L 7475792 7475811 TTCAACGGTTGTGAACTGAC 59 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 1 3 5 80 2L 7687853 7687871 GCCAATTACTCTCGTCGTC 58 7687915 7687983 CTTATCGGAGTCCAATGGC 58 NA Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079578,FBtr0079577 2 2 2 60 2L 8148004 8148022 CCAACTCTAGTCGGATCAC 57 8148044 8148064 GGAAATGGTTTAGAGGTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 3 4 4 80 2L 8173530 8173610 ATTGATCTACAGCCATTTGCC 59 8173652 8173670 GAGATACGAACCCAGGGAG 59 NA Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 2 2 2 91 2L 8372746 8372891 TATTATGGACCCACGGTGG 58 8372945 8372964 TTCTTGCCCAAATCCAAGTG 59 NA Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 3 2 2 138 2L 8391199 8391291 CAAAGCGACTTACAAGGGA 57 8391079 8391097 AATTCGTTGCAAGCAACAC 58 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 2 2 3 130 2L 8482614 8482632 GGGACTATTACCGCGATCC 59 8482725 8483143 GGATGAAGATGCATGGATCG 59 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 3 4 4 99 2L 8688852 8688933 TTCTTCGATCCCAATGCCA 59 8688771 8688791 GCCGATCTGATATGTAGTCCT 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 1 3 4 83 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519738 AGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 1 2 2 99 2L 9613532 9615312 AAAGATAAGGCCGATCTCGA 58 9615374 9615392 AGATCATCTTGCAGGGTCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913 2 1 6 92 2L 9825633 9825651 GTTAAGTTCGGACTGACGC 59 9819323 9825309 CTTCTCGTCCAAATTTAACCAC 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 4 7 81 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 1 2 2 84 2L 10351769 10351787 GACCCACTATCCAGATGCC 59 10350766 10351722 TTGAAACCAAACCTGCACTC 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 3 6 6 81 2L 10398148 10398166 GAGTGCCCTTTGTGTATGG 58 10398210 10398288 ATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 3 4 4 81 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415401 10415481 TGCTGAAGGTACTTTAAGGC 57 NA Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 3 2 2 83 2L 10440042 10440063 TGCCCTTCATAGATGTTACTCC 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 3 3 3 175 2L 10774660 10774752 CGACAATTGTCCAATTCTCG 57 10774504 10774524 CTTTGTTGTCATCGGTTATGC 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 1 8 10 80 2L 10806027 10806050 CTACAGAAGGATCAAATCCTAGAC 58 10805729 10805989 GTCCTGCACATATGTCTTCG 58 NA Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 2 2 2 60 2L 10843766 10843784 GTCGATTGTATGGACTGCT 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 2 2 2 80 2L 11003231 11003522 ACATGATCAAGGGAGTCACG 59 11003170 11003188 AGGTGACACAGTTGATGGG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0301840 3 1 4 80 2L 11142996 11143017 ACTATATCGTGGTTTCTGTGGA 59 11142404 11142956 GAGCAAATGTCGTACGTTCC 59 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 2 1 2 91 2L 11790072 11790090 GTTCCTCATATTGTGGGCG 58 11790202 11790378 AAATCCATAACAGAAGACTCGC 58 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0080286 3 1 2 171 2L 11991357 11991375 TCAGATCTTCGGAGTGCAG 59 11991509 11991583 TTCATCGGTATCTGGGTCTG 59 NA Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 1 2 2 111 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051538 12051556 CATTATCGGCCATCTTGCG 59 NA Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 1 2 2 80 2L 12056423 12056508 TGTCAGACAAATATGCGGTG 58 12056551 12056569 GCAGAATTCTCCTCTTGCG 59 NA Nonspecific Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 3 3 3 177 2L 12104543 12104696 ACTCGCAAGGAACTCAGTC 59 12104837 12104855 CTTCGTACGGAGTGGTCTC 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 1 3 5 80 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271635 12271653 TGTATGGGACTATTCGGCA 58 NA Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 2 1 1 102 2L 12356549 12356567 CTGGATGTGGTTGTCTTCG 58 12356686 12356704 AGGTCTCCATGTACGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 1 3 17 87 2L 12731059 12737971 TCTTTATGGTTCTGGCTACCA 58 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636 1 1 3 80 2L 14389444 14391083 TTGGTGTATATGTGAAAGCCAC 59 14389385 14389405 GTGCCTCCAATGATAAATGGT 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0300845 2 1 3 98 2L 14848243 14848681 GATGAAAGGTGTCGGAATCG 59 14848164 14848183 GATTCGTACAGATAGCGCAG 58 NA Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 1 1 1 67 2L 15009478 15009496 CAAGTTCTCCAAGACGCAC 59 15009374 15009394 CAGCATTCATCACATTGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 1 2 2 89 2L 15230347 15236615 GTGAATGTCATCATGGGCG 59 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 1 3 9 110 2L 15261795 15261813 ATCTACGACGAATCCTCGA 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 2 4 4 80 2L 15267015 15267158 TGTCCACGTACCAGATGTG 59 15266953 15266971 CGGTCTCCTGGTGTATGTC 59 NA Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 2 2 2 80 2L 16308315 16308401 AGAAGCTCACAATGTTGGC 58 16308442 16308463 TGATGATATAGGTCAGCTCCTG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0080876,FBtr0080879,FBtr0100399 2 4 7 168 2L 16483941 16483959 CTAAAGCGCCTTGACATCG 59 16481535 16483810 GCTTGATCGATAGGCATCTG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 1 14 16 81 2L 16774785 16774803 GACTCTGGATACCCAGCAG 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 3 5 16 80 2L 16769221 16769240 CATGACCGTGCTTAACACTC 59 16769282 16770467 CCGGAGTAGGTGTAGATGAG 58 NA Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 2 2 2 80 2L 17191093 17193539 ACATGATTGTTGCGTATCTTCC 59 17191034 17191055 CATAGTCTCCGATTTGGTAACG 59 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 3 3 4 80 2L 17417620 17417639 TGAAACTAGTGAGACCCTCG 58 17415377 17417579 TGGTTAGGAGTTCTGGATTCG 59 NA Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 1 1 1 60 2L 17532019 17532038 CTTCTTTACAGGATCAGCGA 57 17531913 17531931 CCAGTTCTTCGGACAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 2 4 12 90 2L 17717898 17717917 TTCAATCCCAACGATCTGGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 2 2 2 107 2L 19056064 19056261 CAGCACGATAGTGTCAACG 59 19056330 19056350 CTTGACTCGATGATTGTGTCC 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0081223 1 1 3 80 2L 19385355 19385791 TTTCCAACAAAGCCACTACAG 59 19385295 19385314 CTATAACCTCCACCGTAGCC 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 3 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569184 GGGTTTCTCTACATAGGTATGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 3 3 3 89 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733055 19733168 GTCTAACGAGCATATCTTGCA 58 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 2 2 3 81 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790648 20790666 GCAATCCAATATCCCTGCA 58 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 2 2 3 81 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790648 20790666 GCAATCCAATATCCCTGCA 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081420 1 1 5 102 2L 20825505 20825680 AAAGCTGGAAATCAAAGCCAG 59 20825744 20825762 TCAGCAGATCAATGCCCTC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 3 4 9 140 2L 20876967 20876986 TCAAGTGATAATCTGCCCAC 57 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 3 5 7 80 2L 21128054 21128754 CATTCCTAGGTGGTATAAACAAGC 59 21128793 21128811 CCTTCGAGCTGGAACTCTC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 1 5 7 80 2L 21121224 21121590 AGAGATCTTAAGGGAGCTGAG 58 21121629 21121650 CCTCATAACTTCCATAGCATCG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 2 2 3 60 2L 21312018 21312038 GCTGTATGACGATAACTTTGC 57 21312114 21312132 GGTCAAGGCTTCATCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 1 3 3 113 2L 21627750 21627852 TGACTCAACAGATGCTCCC 59 21627655 21627673 GCCTCATCAAGCTTAGCCT 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 3 2 5 123 2L 21670623 21670642 TCTACTGAACTTACACCCGT 58 21670466 21670537 CTATTAACGATCGCACCGT 57 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 2 3 3 81 2L 21741846 21741866 CATTGCTTTGAGTTGTTTGCG 59 21741726 21741803 CCTCTACCACTTTGCCCTC 59 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 3 3 3 96 2L 22959942 22959963 TAATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 1 2 3 95 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648241 20648433 GGTTTCAGCATTATAAGTGTGG 57 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 3 3 3 154 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040328 AGCAGAAATATCTGATCCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467 3 1 2 81 2R 1081113 1081133 GATACGTTTAGCATGTCAGGT 58 1075852 1081070 CATAACGCACCTTCGAGAC 58 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 2 2 3 117 2R 1182467 1182485 ATGAGTCTTACACCAGCCG 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299920 2 1 4 119 2R 1327149 1327169 GAGTGTGGTATTCGTAGAGCT 59 1327249 1340794 GTTGAGAATGACTCCTTGCG 59 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 2 2 2 112 2R 1394204 1394273 ATTGAGAATCCTTAGGAACGC 58 1394112 1394132 GTGGTTCTAATTTCTGACCCA 58 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 1 4 4 88 2R 1595871 1596125 GCTAACATAGATCTCAACACTGAG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 2 1 1 143 2R 2495735 2495753 CATTGGACGTCCTTAGTGC 58 2495551 2495570 ACTTCAAGTTTCTGCAACGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190 1 1 2 99 2R 2560386 2560466 TAAATTCCAAGGGCAACGC 59 2560305 2560323 AGTGATTACCACCACAGCC 59 NA Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190 3 1 2 101 2R 2560387 2560468 CCTAAATTCCAAGGGCAACG 59 2560305 2560323 AGTGATTACCACCACAGCC 59 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 1 3 3 86 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 1 11 11 88 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 2 5 11 142 2R 2764834 2764852 ATGTTCTCCGATCAGGCTG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 3 3 6 96 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814241 2814259 CTTCGCGTTGAGATTCTCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111053,FBtr0111056 3 2 59 81 2R 3219877 3226158 TTGATTGTGAATGTACCTCCCA 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111094 3 1 59 82 2R 3243526 3249237 GATTGGTCATCACAGAGCC 58 3243462 3243481 AATGGCAATACGATCGTGAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081 1 1 59 85 2R 3247854 3247872 AAGGTGCTTCAGTTCTCTG 57 3236472 3247807 TTGTACCATCTAAAGACTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081 3 1 59 87 2R 3247854 3247874 TTAAGGTGCTTCAGTTCTCTG 58 3236472 3247807 TTGTACCATCTAAAGACTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111060 2 1 59 81 2R 3226958 3226977 GGAAAGTATAGTTGTCGGGC 58 3219874 3226914 ATCTGGGAGGTACGTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111058 3 1 59 82 2R 3219876 3230477 TCGTCAATGTACCTCCCAG 58 3219812 3219830 CTTGCATTCAACCTTGGCA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 2 2 59 99 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236471 3243202 CTTGTACCATCTATAGAAGGGC 57 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 3 1 1 104 2R 3399403 3399421 GTACAGCTTTCTGGCAGAG 58 3399261 3399281 GTCAGTTGATTCTCCTCTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0113382 3 1 6 92 2R 3520825 3520843 AACTATGAGTACTGGGCGC 59 3520899 3521730 GGCTAGTTTGAGATGCTGC 59 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837 1 1 3 82 2R 3592966 3592984 AAAGGCTGAAACAACTGCA 58 3590738 3592923 TGATATTCGTAGCCCAATACTG 57 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 1 3 3 116 2R 3690701 3691032 GATATTTCCGAGACTTCATCGC 59 3690606 3690624 CATCACATTGTCCAGCACG 59 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668 1 1 2 88 2R 4014486 4014504 GTCTGCTCACCTCAGATGG 59 4014362 4014435 AAACCGAAAGGCTTTGAGTC 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 1 2 4 82 2R 4757945 4758444 GACACAATGAAGAGAAAGTCTACG 59 4758485 4758503 AAAGACGCCGACTATGTCC 59 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 3 1 1 80 2R 4793148 4793166 CCACAATTGTGGCCTTCAG 59 4793022 4793040 TGAAGTTGTCGGTAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 2 2 2 69 2R 4996587 4996605 TGACTCCATGAACGAGCTG 59 4996472 4996494 GTACTGTTCCTTGATGTACTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 3 2 2 69 2R 4996589 4996607 TTTGACTCCATGAACGAGC 58 4996474 4996494 ACTGTTCCTTGATGTACTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088522 2 1 3 109 2R 5467333 5467478 AGTTCCAATCCAAGAAGCTG 58 5467548 5467568 CGTGTAGTCGTAATCGAATCC 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 1 2 2 120 2R 5752950 5752968 TCACAACCATACAGCAGGA 58 5752717 5752797 AAGACTCCAAACCACTGCA 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088446 1 2 5 178 2R 5806555 5806959 GGATTCAGTTTATCCATCGGG 58 5806282 5806300 TGACGACCCTTAGATTGGA 57 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 3 2 2 106 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860097 GACTATCTCTGACGATCTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943 2 1 3 127 2R 6021508 6022782 CTACAGTCCCGAATACGGG 59 6022873 6022891 CTCGTTCCGTATCTGACGT 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 2 2 4 140 2R 6359166 6359186 ACAAGTGTTTCACTGTCTGTG 59 6358238 6358721 TACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286 2 1 26 118 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6410459 6419549 TAAAGCGTCCTTAAATCTTGGG 58 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 2 2 3 80 2R 6773024 6773102 AGTTCCTCATCTATGAGAACGA 58 6773143 6773161 GATCCCGGGAAACTTTCAG 58 NA Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 2 2 2 80 2R 7511398 7511477 CAGGGAGAAAGTTCCTCCA 58 7511336 7511357 ATCTGGGAGAAGTACAACTGAC 59 NA Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113071 3 1 2 85 2R 7758832 7758926 GATAAGCTACTATGCCTCGC 58 7758766 7758784 TTACTACCGATCTCCACGA 57 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 3 4 4 84 2R 7786481 7786499 ATCCTCCAAGGACAACGAG 59 7786135 7786435 GATGTCATTCTTTGGTGTGGT 58 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 3 2 2 73 2R 7869941 7869960 GGATGTACACAAGCGTAGTG 58 7869823 7869841 CCAGGTAGTCAGCTATGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 3 2 2 116 2R 8186726 8186747 GTCTACTATATGGCTGGATGGA 58 8186569 8186649 CAGTCCGAATTTACTGCCA 57 NA Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 2 1 1 64 2R 8264451 8264469 TACCTCAAGAATCCAGGCA 58 8264604 8264622 GAGGTGTACGAGAAGGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 1 1 1 68 2R 8293577 8293596 TTTCCCAGGAATCCAATGTG 58 8293685 8293703 TCGAGCCATCTTTGAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845 3 1 2 95 2R 8541554 8541642 TACCAGCAGAATCTATTCACTG 57 8541698 8541716 CTCCTTTCTGTTGTCGAGC 58 NA Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 1 2 2 80 2R 8588055 8588132 CGCAAGATGTATGAACTAAGTC 57 8588172 8588191 CTCGTAGATCTCCTTCTCCA 57 NA Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699 2 1 2 81 2R 9378989 9379011 GAGGCTCAGTTCTCAATTATAGC 59 9378367 9378948 CAATGCCGATCTTGGTGAG 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 2 2 3 80 2R 9406092 9406113 CCATACTCTGCTTTATGTATGC 57 9405635 9406054 AGATCAAAGACTTCTTCTCGTC 58 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451 1 1 4 81 2R 10058942 10059798 TTTACCTCGGCATAGGTGC 59 10059841 10059861 ATGATGTTGCACAGTAGTTGG 59 NA Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 2 2 2 80 2R 10395746 10395764 CATATCCAGGATGTCGTCC 57 10395808 10395899 CTGGCCGATATCATTTCCA 57 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 2 2 2 142 2R 10638486 10638657 GAAAGCTGGCTATTACCTATTCG 59 10638366 10638384 CTGCACAATCACATCCTCG 59 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 2 2 2 122 2R 10720449 10720684 CATCGGCTAATGCTCTTCTG 58 10720769 10720787 GATCACCTTCTGCGTTTGG 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 2 5 5 80 2R 10790221 10790300 CCGACAGTAATGGCAACAC 59 10790159 10790181 TAGAATCCAGCAGTATGGATACC 59 NA Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 1 2 2 80 2R 11400206 11400225 CTGGACTACTATGTTCGCAC 58 11400268 11401266 ACGAATCAAACCCAATCGG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 1 4 13 80 2R 11846817 11847308 CCTCGTACTTCAGAGATCCAC 59 11846757 11846775 ACAACGAGATGTGAGTGGG 59 NA Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 2 2 2 99 2R 11900045 11900064 CTAGTGCGTTACCTCTTGGA 59 11900184 11900202 GTTTCAAGAAGGCAGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 1 2 5 80 2R 12020076 12020098 GGACCTTCCTTCATCTATCTAGG 59 12020137 12020942 GAAGTTGAACGCAACATCGT 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154 1 1 5 81 2R 12248360 12248378 ATCAAGAGTCCTGTGGTCC 58 12248423 12250715 TGGGAACTGTGAAGTTCGT 59 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 1 3 3 80 2R 12507179 12508835 TGGATTTATGGGAAAGGTACTG 57 12508870 12508894 GGTCGTATCAGTAGATAGATATTCC 58 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 3 3 6 133 2R 12897657 12897676 TGACAAGCTGTCCTACATCG 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 3 2 2 81 2R 13679635 13679718 ATGGTCTATAATGACCTGCTG 57 13679761 13679779 CAAACTCATCGCGTTTCTC 57 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 1 4 4 126 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020605 14021381 AACTTTGGCCATCCTTGGT 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0301149 1 1 8 173 2R 14311505 14311646 CAAAGGAGATAATACAGCCAACC 59 14311852 14311871 GTTCGCAGCGTATTGATCTC 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 3 4 4 81 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529502 14529522 CATCATGGTATTTAGCTCGCC 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 1 2 2 112 2R 14697625 14697643 ATTCTTTGCCCTTACGGTG 58 14697465 14697550 CCGACCAATTATACTCGGGA 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633 1 1 2 145 2R 14697677 14698839 TTTGAGGATGAAGACTCCGG 59 14697551 14697569 AAATCGGGATTGACGGAGG 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 2 5 5 84 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844995 14845243 ACTGCTAAGACTCTTGTACCTG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 1 5 12 80 2R 15062801 15063698 AGCAATTCACTTGGACCAC 58 15063739 15063760 CGAGGATTCTGAAATTGAGGAG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086508 1 1 4 87 2R 15124558 15124852 AGAAGGAGAAGTCGAGCAC 59 15124902 15124921 GCCTCAATCTCTAGGTTGGT 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0301882,FBtr0114605 1 2 6 133 2R 15319735 15319817 AGAATTGCTAAGATCCTGCTC 58 15319622 15319641 TCATAGGTCGAGAACTGGAG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0086460,FBtr0100392,FBtr0086457 2 14 19 104 2R 15365202 15366258 TCACTCTGGTCAAACCAGAG 59 15366325 15366343 GAGAAGAAGCTCATGCGAC 58 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343,FBtr0086342 2 2 2 72 2R 15671499 15671519 GCTACATTCGCATTGACTCTG 59 15671379 15671397 CCGAACTGTCTATGTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318,FBtr0086317 2 2 3 85 2R 16143303 16143398 CCCTACAGAATGAGAAACCC 57 16143237 16143255 AATCAACTTGTCGTCCAGC 58 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 3 2 2 170 2R 16150142 16150160 CTCAATGAGGCAACCTTCG 58 16149930 16149948 CAGAATCTTGGCCATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 1 3 5 84 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212011 TTTAGGGAGCTAGCCATCTC 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 3 4 4 80 2R 16354375 16354395 AATCGATGTCTTCTTCGAGTG 58 16354436 16355133 AGAATCTTACCATTGTGCCG 58 NA Drosophila melanogaster 61 CG33786 FBgn0061361 FBtr0091787 3 1 1 254 2R 16531114 16531132 AGATCAGGCGCAAGATCTC 59 16530803 16530821 TAAAGGCTCGTTTGAAGGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 2 3 3 80 2R 17172235 17172255 TATCTATCAGATGTGAGCGGA 58 17172297 17172371 ATACATCAGCAGAATGGGC 57 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 2 2 8 112 2R 17187801 17187819 CTCCAACCAGAGTCCTTCC 59 17187892 17191402 AGCGATTTATGTTATAGCCAGG 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 1 4 5 175 2R 17202260 17202341 ATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 3 2 2 107 2R 17209251 17209327 TATACAGAAAGGGTCATACGGA 58 17209165 17209183 GAATAACCAAAGCCACGCA 59 NA Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 3 2 2 80 2R 17375862 17382649 AAATTCGACTCGAGCTTCG 58 17375800 17375820 CTGATCCCAACCCTTAATCAC 58 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 1 2 2 80 2R 17542998 17543106 TCTACTCTTGCTCACTGCTC 59 17543149 17543167 CATCCTGACTCATCGAGGG 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071816 2 1 4 152 2R 18210516 18212685 ACATGACATTTCTGGTTTGCC 59 18212795 18212817 GTCAGATCGTCATGAATGAAGTG 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315 1 1 5 87 2R 18598036 18598057 AACTGGTCATCATTGGATTCAG 58 18598105 18598171 AAACGAATCCGTTCCTTGC 59 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 2 2 2 80 2R 18703126 18703201 CCATCACATTCAGATATCTCCG 58 18703241 18703260 TTTGCTACTCAGTTCGTCTG 58 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 3 2 3 109 2R 19279421 19280899 CAAGGAGACCTGGATCCTG 59 19279330 19279349 AAGTTACGGAGAGGAAGGTC 58 NA Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 2 1 1 161 2R 19492026 19492044 GTGGAGTTCCTGATCACCT 58 19491547 19491566 GACTGGATTCATACTAGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 3 2 2 80 2R 19887930 19887948 TGGTCTGCTTCTATCGTGG 59 19887807 19887889 AGATCCATCATTTCGATCTGGT 59 NA Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0113464 2 1 2 80 2R 19900292 19900312 AGAGTTCAATCCCACCATGAG 59 19900168 19900253 TCCCTGAGAATGGTTAGTTTCC 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 3 2 2 88 2R 19924653 19924731 GTCAACCGACTAACCACCT 59 19924583 19924601 TTGACTGTTTCGCAAGTCG 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072189 1 1 2 91 2R 19924561 19924579 CAAGTACATGCAGTCTCGC 59 19924428 19924509 TGAATAGTTCCCTAACGTTCAC 58 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 2 1 2 92 2R 19954749 19954767 AAATCTACGCAGTGGGAGG 59 19953826 19954694 AAGCCCAGATTCATTCTGCT 59 NA Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 2 2 2 85 2R 20017595 20017613 TAGCCTTCGAGACCATCAG 58 20017463 20017548 CGAATAGGTCTTGAGAGTTCG 58 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867 3 1 2 132 2R 20464512 20464532 GCGAATAACATGACGAAACCA 59 20464625 20464689 GAAGAGTCAACCGACTTGTG 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072435 2 1 3 90 2R 20660795 20660814 ATACTCTTACCGCCACACTG 59 20660516 20660742 TTGTGGCTAACTTGAGCCT 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 2 3 3 81 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962846 20962923 TTTATGGAACTCGTGCTTGC 59 NA Drosophila melanogaster 61 CR30009 FBgn0050009 FBtr0088361 3 1 1 171 2R 6151289 6151307 TGAGTTACGATCTCGGTCC 58 6151073 6151092 TTGTACTATTGCTCAGTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539 3 1 2 88 3L 152266 152354 GGAGTATCTTTAAACGGTCCA 57 152198 152217 CTTAGACTCTTCGGCTTGTG 58 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299866,FBtr0072475 2 2 6 150 3L 171972 172073 TGTGTTGTGTAATCACACCAC 59 172182 172203 ATTGCAAAGTTCTGGTAGATGC 59 NA InUTR Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 2 3 5 101 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235421 235440 ATATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 2 1 2 247 3L 711822 711840 ACCTTTCTCTTACGCCGTC 59 711534 711554 TCGATATCTGTCATTCCCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 1 1 1 60 3L 841055 841075 GAGGAAGATATACGCCATAGC 58 840964 840982 AGTGCTCTCCAAGAGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 3 6 6 80 3L 982096 982188 CCATAATGGTTGTTATGACGCT 59 982228 982247 CCAGACCATAGAGATGCAGG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 3 3 3 103 3L 1621163 1621182 CTTGTTCAAAGGAGCTGTGG 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072799 1 1 2 80 3L 1720161 1723591 CCTGCGATATAAATTGCCCAC 59 1720101 1720119 CACATACCGCGTTGTTCAG 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 3 2 2 80 3L 1769261 1769342 GCAAATTCAAGGGTCAAACTG 58 1769201 1769219 ACTGTATCATCGAGGTGCA 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072956 3 1 5 197 3L 2564418 2564438 GAACGATGGAACTCTATTGGC 59 2562830 2563822 TTCTGCTCTAGTTTGCGCT 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 3 2 2 80 3L 3202190 3209297 CTGAGGAATAGTGTATTCCTCAC 58 3209335 3209355 ACCCACGTCTATTTGAATCTG 58 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073095,FBtr0073096 3 2 6 84 3L 3221975 3222799 TAAACCTCGGAGACGTGAG 58 3221909 3221928 CTTCTTCAACAAGAAGGCGT 58 NA InUTR Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778 1 1 2 101 3L 3507200 3507308 CGATTAAGGCGGAGAATCC 58 3507373 3507391 TGGACTCCAGATTGTCCAG 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186 1 1 5 80 3L 3799927 3799947 ATGTCGAAGTCCCATAATGCT 59 3769388 3799888 GCTCCATTCTGTTTCTTAGCTC 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186 3 1 5 81 3L 3799928 3799948 GATGTCGAAGTCCCATAATGC 59 3769388 3799888 GCTCCATTCTGTTTCTTAGCTC 59 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 1 3 4 108 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833660 3836030 TAAATGGAACCACTGCTGGA 59 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156 1 1 2 80 3L 3860695 3860716 TTTCAGAATAACGCACAGAACC 59 3860753 3860904 ATCCATAGAGGATTCATGAGTCG 59 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 2 3 3 82 3L 4023745 4023763 CCCAGGATGTCCATGTCTG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 2 4 6 239 3L 4418264 4418282 CAGGCGATGTAATTGAGGT 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 1 2 8 80 3L 5669984 5670004 GAATTGTTCAACAGGCTTCCA 59 5670044 5697040 GATCATCGTCCGAAATCTCTG 58 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 1 1 1 60 3L 6659948 6659969 CCATAAGGAAACTGCTAGAACG 59 6659846 6659866 GATACGTTCCCAAATTTCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 1 4 4 80 3L 6683421 6683501 CTTCTTTGGATTAGGCAAAGG 57 6683361 6683379 GACCAGAACTCCAGTTTCG 58 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957 1 1 2 82 3L 6710489 6710507 TGAGAGCGTTGAACAGGAG 59 6710041 6710444 GACCGTAATCGTTCTTGGTC 58 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 2 5 5 131 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365692 TTTACGACAGGTAGCTAGGC 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089849,FBtr0089850 1 2 3 85 3L 7610695 7612898 CAGTCTAGAGACCTGCGAG 59 7612947 7612965 AATAGACGCCACTGGTCAG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0302845,FBtr0302842,FBtr0112702,FBtr0112698 2 4 15 138 3L 7701002 7701020 ATCCTTCATGTCCGACTCC 58 7699830 7700734 CATATTGTCTTCGCTGGAGAC 59 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0076811 2 1 2 86 3L 7753744 7754669 CTCCTTTGATAAGCCAACGC 59 7754718 7754736 AGAAGACAGGTGTTCCTGG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782 1 1 7 153 3L 7811314 7818692 ACTTGAACGGCAAATCCAC 59 7811179 7811197 TTGAGGTCGGCATCATAGG 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076771 2 2 5 181 3L 7900432 7904534 CAATCGAAGTGCGAGATGTC 59 7900270 7900288 TCCAGCACGTAGAATGTCC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076774 3 2 5 169 3L 7891946 7893189 CATGGCAATGGTGGTTGAC 59 7891726 7891744 TCGGTGTATTCGTGATGCT 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 1 4 5 84 3L 8092629 8096005 TCATTAAGGAAGCCCTCTCAC 59 8096051 8096069 TGCACCGTAATACTGGAGG 59 NA Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153 3 1 2 104 3L 8344385 8344403 ATAATGGTAGTGGCGGACC 59 8344470 8344876 TCTTGTACTCCTGATTGCCG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 3 3 13 178 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631266 ATACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 1 3 13 161 3L 8627811 8627829 CAGTATCATGAAGCAGCGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 3 5 5 81 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408555 9410758 GGCATGAATTATCTCGGCC 58 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 3 2 2 80 3L 9451447 9451520 TCTATGCGGAGCTTAATTCAG 58 9451561 9451580 GCTTAAAGGTGGGATTGAGG 58 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416 1 1 2 89 3L 9679554 9681639 AAATTTAGGAGTCGTGCGC 58 9679483 9679503 CAGATCCATGGTGATGATGTG 58 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 1 2 4 163 3L 9707711 9708852 TTGTGCGAAGAAGTGACCA 59 9708979 9708997 GATGTGGTAATTGGTGGCG 59 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 3 3 3 81 3L 9721525 9721618 GAAGAGAAGATTTACGCTTCACTC 59 9721657 9721676 CACATAGGTGAATCCGTCCT 59 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607 3 1 3 144 3L 9730373 9731221 TTTACCTTCAGGGTCAAGTG 57 9730248 9730266 ATGCTGATTAGCTCCTTGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0100386 1 1 8 200 3L 9823160 9823742 AATCTGGAGGGCTACAAGC 59 9825597 9825616 CTGCAGATCAGTCTGATCCT 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 2 3 4 119 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032753 11032771 ATTGTAGTTGCCATCCTCG 57 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161 3 1 2 116 3L 11094310 11094384 CATGAAATCCGGATAGCGG 58 11094212 11094230 ATGTAGGAAGCTCAGCTGG 59 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 1 4 5 125 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109442 11109460 GGAGTCTGGAACAGATCCT 58 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 3 4 5 126 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109441 11109459 GGGAGTCTGGAACAGATCC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0301135,FBtr0076078,FBtr0110869 1 3 6 61 3L 11815356 11815374 TTAGTTTACCAGCCCTGGA 57 11815181 11815337 CTATGATATCACCAATATTCTCGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 3 3 4 89 3L 11992087 11993381 ATGCGTGAGATGTTCTTCG 58 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 1 6 6 85 3L 12206875 12206893 TCGATATGGTCGGTGATCG 59 12206565 12206826 GATCCCTTGAGATCCTCGT 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 2 4 6 119 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205759 12205777 GGACAAGATCGTAACTGGG 57 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 3 5 5 120 3L 13475358 13475376 AGAAGGAGTACGCCTACCT 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127 2 2 4 158 3L 13876429 13879191 CGTGATTTGCCGGAATACG 59 13867040 13867058 TTTATCGCCCAGCAATGTG 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428 2 1 7 120 3L 14410284 14431533 CTACAGGGATCTTGGTACCC 59 14410183 14410203 GGATGTCTTCTTAATGCTGCT 58 NA Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 1 2 2 80 3L 15010638 15011239 TGATTGAAGCTCACAATCTCAG 58 15010579 15010598 CTTCTGGTTGCAACATCAGG 59 NA Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 3 2 2 193 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113866 15113884 AACTCATTGGGTCCACAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0301472 1 2 7 179 3L 16062036 16063231 GCTCCAAGTTCAAGTTGGAG 59 16063436 16063454 AGTTGAGCGACTGATTGGA 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 3 4 4 67 3L 16346790 16346808 GCATCATCAACTTCACCCG 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 1 2 2 80 3L 16558053 16558143 CTTACTACCAGTTCCGCCA 59 16557991 16558009 GGGATCCAAACAGACCCTC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 2 5 7 80 3L 16952972 16954606 CAGGAGCTACCAGATTCGAG 59 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 2 5 7 80 3L 16952972 16954606 CAGGAGCTACCAGATTCGAG 59 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 3 2 4 81 3L 17061138 17061156 GATCTAACCAATGGGCAGC 58 17060461 17061097 CCTGATAGTTGTTCATCACTGAC 59 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205 1 1 2 103 3L 17549672 17549690 GTTCAACGAGAACGTGCTC 59 17549511 17549605 CCTTGCATGCTTTGACCAG 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075148 3 1 4 162 3L 17986086 18051347 TCCTGATCTAGAATTCGATGGC 59 17962545 17962563 CTGCTGATTCTTGGTGCAC 59 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242,FBtr0089387 3 2 2 94 3L 18480883 18480901 TCAGGAAACTTCACACCGT 59 18480594 18480825 ACTTATGACCGTGAGCACC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 1 12 12 142 3L 19311991 19312010 TTCTTCCTGTTCATGCACAC 58 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 3 4 4 110 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620469 19620547 TAGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 1 4 4 109 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 3 2 2 93 3L 20181853 20182103 CCTGAAGCTGATCATCAATCTG 59 20182157 20182175 GTTTAAGTTCCACGTGCCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 3 2 2 129 3L 21276345 21276363 TGCCATTTCCATGATGGTC 58 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 1 2 2 89 3L 23332716 23332734 ATGTCACTTGGAATCGCAC 58 23334563 23334581 AATAATCCCTCACAGGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143 3 1 2 90 3L 24124312 24124330 GACGTATGCTTGCTCTGTG 59 24154275 24203136 ATACGATCCAGTTGTTCTCCT 58 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 1 3 3 92 3R 95629 95647 TAGTCAAGTTCGCTCTCGA 58 95496 95573 TAGCGTTCATAACCACTGC 58 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 3 3 4 80 3R 162242 162260 AATTAGACCAGGTGCCCTC 59 162120 162199 GGCTCCTGGATACTAGTCTG 58 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 1 3 3 121 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464553 464750 GCAACAGATCTTCTACGTGG 58 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 1 2 3 80 3R 1008596 1009506 TGTGCTAGATATCGAGCGTC 59 1008535 1008555 CAGGAACATGGTTAGCTTGTG 59 NA Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 1 2 2 96 3R 1046105 1046123 AGAGACCAACGAAGAGCTG 59 1046181 1046266 GGTTACGTTCTTAAGGTGGTG 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 1 3 3 80 3R 1092686 1092704 GGCGATAAGATCAAGTGGG 58 1092746 1092854 CACAGAGTCAATCTGATTGGT 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 1 2 2 80 3R 1434217 1434238 GAGCATCTGAACGATAATTCCA 58 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 3 2 12 94 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587156 1587375 TTACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 CG10981 FBgn0037384 FBtr0078638,FBtr0078639 2 2 2 81 3R 1651096 1651114 TGAAGATGCTCATTCGCAG 58 1651159 1651231 GTAGCGATTCATGCGATCC 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 1 5 5 85 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 3 2 2 85 3R 2467215 2467233 AAGAGATCGCCATGGAGTC 59 2467282 2467356 ACTTGGACAGTTTCCAAGC 58 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081685 2 2 4 120 3R 2480796 2480942 GCAGCAAGATGAATCCATGG 59 2481025 2481043 GAAGTTGGTGAAAGCACCC 59 NA Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571,FBtr0081570 3 2 2 149 3R 3001106 3003937 CAAGAGCTATAAGCACGGC 58 3004050 3004068 TCCAGACAGTTGGGATTGG 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184 2 1 3 122 3R 3023370 3024058 AATTATATGCAGGGAATGCCG 59 3024142 3024160 GATGCCCGTTGCATTACTG 59 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0300016 2 1 2 107 3R 3077602 3077620 TATCGTACCTGACGATCCG 58 3077230 3077532 GCACAAGCTCTAACATACGG 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 2 3 5 180 3R 3697535 3697553 GTATACAGATGGACGCCGA 59 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 1 3 3 92 3R 4184860 4184937 TGCTAACGATATGAACGAACTG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081877 2 1 2 80 3R 4448070 4448088 GGCCAATTCAACGGATACG 59 4448132 4448219 GTTGGCTCCTTTATGCTGG 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 1 5 14 95 3R 5258552 5269741 TTCAGTTCCGGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 3 2 2 80 3R 5575743 5575766 GTTAAGGATATGGGCTATGAAGTG 59 5575800 5575879 CATAGTATCACAATAGTTCGGAGC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 2 2 2 80 3R 5998355 5998375 CTCTTCCTGATCATGTTGCTG 59 5998142 5998315 CTCGATGATCTCTGTATTGGC 58 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 1 3 8 105 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082313 1 1 2 80 3R 6579540 6579771 CTCGAATCACATACTGACCTG 58 6579480 6579499 CATCATGGTCAGGTAAACGG 58 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300078 1 1 3 121 3R 6639314 6639987 TCAGAGCAGCAACCTACTG 59 6639211 6639229 GTAGTCCAGTGCCTTGAGG 59 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 2 2 3 101 3R 7202932 7203772 CTCCTACTTCTTCTACATTGACAC 58 7203831 7203850 GGAAGTACATCTTGAGCACC 58 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082396 1 1 3 147 3R 7279530 7283315 GATGATGGGCTATAGTCAGCA 59 7279403 7279421 ATGGATGATGACGTAGGGC 59 NA Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 2 1 1 103 3R 7500070 7500091 GTGAAGATTGGCATTAAGAAGC 58 7500218 7500236 TCTGTTCCATCCTGCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 1 5 5 73 3R 8270798 8270816 TACCTCATGGTCACCTCTG 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 1 3 4 82 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338673 8338692 GATCCAGAATAACACCACCA 57 NA Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 2 2 2 81 3R 8681594 8681616 GTCTGAGGATGAAATTCTTACCG 59 8681478 8681553 CTCGCGGGTTATCTTTCCA 59 NA Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 3 2 2 96 3R 8681900 8681973 GTTCGCCACGTTTGATGAG 59 8681730 8681750 AATATTCAAACGACTCTGCGG 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 2 5 5 82 3R 8845522 8845623 GAAATACACGAGAAGGTCCTC 58 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 2 2 3 80 3R 8855688 8855708 CGACAACACTTTCTACGACAG 59 8854594 8855648 CTGATAAGGCTCTCATTGCAC 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 60 3R 9210262 9210281 GGAGGTTGACATTCCAATCG 59 9210393 9210412 TTGCTTGGGATCAAAGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300589 2 1 8 84 3R 9488692 9488711 ATCATCCTCTCGTTATGGCC 59 9488758 9491185 TCCTTGAGATCTAACGCGG 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 1 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 1 5 5 80 3R 9795380 9795400 GATTCATATACACGGGCAAGG 59 9795252 9795340 CGAGTGCATACTTATCAGCAG 59 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112631 3 1 3 103 3R 10230785 10230805 CAAGTTCTTCAGGAGCTTCTC 58 10225504 10230722 CTTCGATTTCTGCAATCTTGC 58 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959 3 1 3 111 3R 10422712 10422731 AAATGGAGACGTTCTGTTGC 59 10430212 10430230 ATGATCAGGATGTCGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 1 2 2 82 3R 10485960 10485979 ATATCCAAGGAGTTTGGAGC 57 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 2 2 2 80 3R 10496559 10497107 CACTATCTGCTTAAGCAGGC 58 10496498 10496516 GTGACTATGGTCGTCCCTG 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083028,FBtr0083027,FBtr0110961 1 3 3 80 3R 11013241 11013259 GAACTGAAGTTGGCACTGG 59 11013300 11013383 CATCTCCTCATCCAACAATCTC 58 NA Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 1 1 1 142 3R 12303252 12303272 GCGATTCATCTAGTGGATTGG 59 12304553 12304571 CTCTCGTACAGCATTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0112803 3 1 6 92 3R 12451897 12451915 GATTTGGCGGACAAATTGC 58 12455313 12457342 CAGGCTGTAGAACCTAACTG 57 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 2 3 3 108 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901810 12901828 TAAACCTCTCGCTCCTCCT 59 NA Drosophila melanogaster 61 htl FBgn0010389 FBtr0083549 2 1 3 96 3R 13874867 13874888 TCCCATCGTTAAGTAAACTGAC 58 13874252 13874270 GTGGATTCCTTGGATCGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 1 3 7 82 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 2 5 6 80 3R 14229547 14229625 GATGAGTTCCTCATTGCCG 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089367 1 1 2 80 3R 14555968 14556057 GCATTTACAGTAAGGATCATCTCC 59 14556095 14556114 GGATGTTCTTCACCATCACC 58 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 1 2 4 124 3R 14844197 14846661 GTGAAGAAGGGTATCAACGT 57 14846748 14846766 CAGTGTCCAATAGATGGGC 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0100549,FBtr0083749,FBtr0100548 1 3 4 84 3R 14985382 14985401 TCCATTCATCAACTTTCGGA 57 14982254 14985338 GGCAGCTATTCTGTAAATATCG 57 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918 2 1 8 80 3R 15302749 15302855 TGGCTCGAGATGAAAGACAG 59 15302893 15302916 TACACTGGGTATCGATAAGATGTG 60 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 2 2 3 101 3R 15464753 15464771 AAGGACCAGATCTGGTTCG 59 15464141 15464633 TCCTGGAATCTCCTTCATGG 58 NA Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 3 1 1 102 3R 15742830 15742848 AAGACTTCAGTCTGCACTG 57 15742691 15742709 TTTCCCGCTGTTATGTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 3 2 8 81 3R 16146584 16147205 CTGAACGTGAAGGATTTGGAC 59 16147248 16147266 ATTCGGATTCCGACTCCAG 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 2 5 8 144 3R 16146162 16147205 TCAACGATCACGATTTGGAC 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 1 2 2 69 3R 16417402 16417420 TTCCACAACTTCACCAGCA 59 16417287 16417307 TCGTAAAGGACATGATGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255 1 1 8 164 3R 16623567 16624023 GATCGTGGGATTTGAAACCT 58 16625757 16625775 CGATAGTCCGAGAAACCGA 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 2 2 9 81 3R 16794198 16798905 GTCAACGAAAGGTTGATTTCGA 59 16798945 16798965 TGACGAAGTACACAAAGAAGC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0114359 2 1 22 80 3R 17200833 17200852 ACAGTCCCAGAACTACAGTG 59 17196940 17200791 TAGGTGAGAACTTGAGCCTC 58 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300008 1 1 3 80 3R 17957057 17958390 CGAATCAAATTTGAGGAGATGC 58 17958430 17958449 CAATTCGGTTATCTCACGCA 58 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 1 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 1 3 3 80 3R 18537937 18538032 AAAGGAGACTATCACGGTCG 59 18537876 18537895 TCAATGCGTCCGATATAGGG 59 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607 2 1 2 91 3R 18833782 18833800 TCGTGACCCTGATGATGTG 59 18832389 18833728 TTGATTAATGCCGTGCACAG 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 1 2 6 173 3R 19093390 19093550 TACGTGTGAATTTGCTGTCTG 59 19093237 19093257 GCTCGTAGTTCCTGTTTAGGT 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 3 2 6 113 3R 19095552 19095570 CAGACTGACTAGTGGCGAC 59 19095310 19095477 TTCAGTGTGATTGGATTGCAG 59 NA Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 1 2 2 125 3R 19198715 19198787 AAATGAACCTTTGCACACCA 58 19198875 19198893 TAGCCAGGATCACAGTTGC 59 NA InUTR Drosophila melanogaster 61 nau FBgn0002922 FBtr0084472 3 1 2 192 3R 19542234 19542252 TATATCGAGAGCCTGGAGG 57 19538853 19538930 CATCAAAGTCTGTAAACTGACC 57 NA Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084595 3 1 2 139 3R 19861440 19861459 AGGACTATCTAATGCAGCCC 59 19860736 19861338 GAATTGCCTCAGGTGAGGA 59 NA Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 3 2 2 80 3R 20014179 20014252 GTGGCGATATGGAGATTCTC 58 20014118 20014136 CCTCCGAACTGTACTCCTC 58 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 5 6 80 3R 20045866 20045947 AGAGATTACTGGCTGCGTC 59 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 1 4 6 91 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 1 4 4 88 3R 20172700 20172812 AGAACTACAACTCGACGGG 59 20172630 20172648 AGTCGAGCCATACTGTTGG 59 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867 2 1 2 92 3R 20212182 20212328 GTAGATAACATGGGCTATAATGGAC 59 20212114 20212132 CACCATGCTCATCTTGGTG 58 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084697 3 1 2 99 3R 20618966 20619109 CTCTGCAACGATCTCACAC 58 20619172 20619190 CATACATGACCAGCTCGTC 58 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112559 1 1 2 87 3R 20885201 20885220 CATTTCCAGTCGACACTTCC 59 20885270 20885939 ATCTGTGACGGTCATCGAG 59 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558 1 1 2 95 3R 20883541 20883559 ATACCTTTGCCACCGAGAG 59 20883615 20885940 GATCTGTGACATTCATCACTGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 1 3 5 197 3R 21507903 21507921 TGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 3 2 2 60 3R 21637229 21637250 AGTTATCCTCGCTTTCAAAGTC 58 21637267 21637289 CTCATTCTCGTGTATAAAGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 3 3 5 91 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711699 GAAGAACATGATGAGCAGTGAG 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 1 3 3 95 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084953 2 1 3 95 3R 21817554 21818534 TTCCCACTCTTCAGGAACG 59 21818592 21818611 CTTGAATGGACAGGTCAGGT 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 2 2 10 81 3R 22423775 22423795 GAGACCCAGGATGATAAAGAG 57 22423836 22424309 GCTTCTCAGCATTAATCATGG 57 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 1 4 9 161 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 3 2 3 86 3R 23058251 23058269 GACACGATAGTCTCACTGC 57 23057910 23058201 ATCTTCACATTCCTGCAGC 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 1 5 5 124 3R 23101498 23102023 ACATGACGGTATTTGGGCT 59 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564,FBtr0300606,FBtr0300607 2 3 3 83 3R 23973960 24027894 CAACTCCAAGCCAGAACAG 58 24027940 24027959 GTGAATGCATCTTTCAGCTG 57 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 1 3 6 147 3R 24637863 24638121 TATGGAAAGTCCAGGTCGC 59 24638450 24638468 CATGACCACTTGCTCTTCG 58 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 2 2 3 113 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652796 24652815 CTATCCTTGACGAAGCACAC 58 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 2 2 2 82 3R 24692180 24692198 GACCTGCACAGTCAATCTC 58 24692241 24692323 GCAGCTTGTAAATGTATCTCAG 57 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299747 2 1 13 80 3R 24743933 24745223 TCGACCTTTACAGCAAAGC 58 24745267 24745285 GTGATGGAGAATGTCTCCG 57 NA Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 2 2 2 84 3R 25058454 25058472 TGATATTTCTGTGCCGGTG 57 25058518 25058593 GCAGGAATTCTGTATGTAGGT 57 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 1 3 4 80 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327143 25327161 TGGCCGTCATTAGATCCAG 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 3 4 5 82 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653706 25653804 GTGTTCGTTTGTAAACGTGG 58 NA Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 1 2 2 80 3R 25736582 25736670 GCAGTCAACAGAAACTCCT 57 25736714 25736732 TTCGGTCCTCTCACTAGTC 57 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0085565 1 1 2 80 3R 25935488 25935576 CTAGCATCACATCAAAGAGTCC 59 25935615 25935635 AGTCATCCTCCTGTGTTAGTG 59 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0110860 1 1 2 86 3R 26339622 26339698 AGATAAACCCGTGATTCATGAG 58 26339557 26339576 TCTGATGCGTCAAACAAGTC 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 3 4 7 81 4 261387 261410 TCTAAGGGTCAGTCTATGTATGTC 59 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 1 3 3 80 4 938362 938962 GCATACTGTTAAAGCCCAGTC 59 938302 938320 GTTTGCTGCTCACTTCCAC 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 1 2 9 140 4 1059052 1060648 TGCTCTTCAGCTAGACGAC 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 1 2 2 80 4 1216412 1216481 AGCAATACCATCCGTACGT 58 1216350 1216372 CTACAGTGATACGATACATTCCC 58 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 3 4 4 105 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449556 3449574 GCTTGATACTGATCTCCCG 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 85 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398965 TAATCGCCCTCAGATAGCTC 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 1 5 6 86 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640606 640626 CAGTATGTGATAGCTGACCGT 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 3 5 6 87 X 640137 640556 CAAAGAAGCGAGACGACTC 58 640606 640625 AGTATGTGATAGCTGACCGT 58 NA Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 2 3 3 106 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237881 1237899 AGCCCAAGTTCTCGTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 2 3 3 82 X 1270211 1270739 GTTGTACCAGGTCATATCGAC 58 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0301843 2 1 6 81 X 1387284 1390134 GTGTGCTCCAATTCTAAGCA 58 1387222 1387243 TTCGTTGTTCATCATGTACAGG 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0301843 3 1 6 81 X 1387285 1390135 CGTGTGCTCCAATTCTAAGC 59 1387223 1387244 TCGTTGTTCATCATGTACAGGA 59 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 3 3 3 97 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800183 1800204 AACAGCAGATAAAGGTACTTGC 59 NA Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 1 1 1 60 X 2627496 2627514 TCAATCCCTCCCTACAGTG 58 2627608 2627626 TTGAAGGAGTTGTTGGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 1 12 12 80 X 3228355 3228597 GTCGCTTAAGTTCAAACGCA 59 3228639 3228658 TCGGAAATCTGATTTCCCGA 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070509 3 1 12 158 X 3140220 3140338 ATATTGCCGGTACCTCTTCG 59 3140458 3140477 AAGTCTCGTTCGAATTGCTG 59 NA Drosophila melanogaster 61 yin FBgn0015565 FBtr0070631 2 1 3 124 X 3759468 3761985 ATTCTCAAATTGCGCCACC 59 3759303 3759322 TTTGTTGGTGAGGTACAGCA 59 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0301122 2 1 5 84 X 4013010 4013028 AGGACGATCAGAATGTCGG 59 4013073 4014161 TCCTTATGCGAACTTAAGATGC 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 1 3 3 81 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037712 4037731 TCGCACATTACCACATAGTC 57 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070665 3 1 3 87 X 4035860 4035878 ATCGCATTGAACTGAAGGC 58 4030791 4035809 ATGACGTCAATTCCTCGTG 58 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 2 6 6 80 X 4847072 4847093 ATCAAGGTGCAGTTGATTATCG 59 4847134 4847209 CGATTCGCAGTTCCTTGAG 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070740 1 1 5 80 X 4959934 4960111 AATAGTCTCGACGCCTACG 59 4960154 4960173 GGTGCCAATATCGATCTTGG 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 1 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 3 3 4 80 X 5214531 5214604 CGCCAAATAATGGGCTATCC 59 5214470 5214491 ATTGTATTCGCTTTCCATCTGG 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 1 2 2 121 X 5604994 5605517 TATTTCTGATCGGCTATGCCT 59 5604893 5604911 CTTGTCCTCGTGACTCAGG 59 NA Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809 2 1 2 100 X 5650178 5650196 TTTGACCTGGACAACACGT 59 5651915 5651935 TCTTTGCTGAACTGGTATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070870 1 1 2 126 X 5956056 5956074 CAGCGAATGTTCAGGAACG 59 5956163 5956809 TTGAAGTGCTTGACCTTTGC 59 NA Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 1 3 3 119 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649216 AGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 3 2 3 102 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7565000 7565018 TTCGCTGAGGATATGTGCA 59 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 3 3 3 97 X 7991393 7991475 ATCATCAGGATTATTTGGGCG 58 7991316 7991334 CAAGGCAATGACCATGTCC 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0100376 2 1 7 81 X 8104009 8104030 GCATCTCTGATGAAGAATTGTG 57 8104067 8104454 CTATGACGTCTTCTAGTAACTCTC 57 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 2 4 6 93 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918297 8918315 CTTGTTCATGTAGTGCACG 57 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352,FBtr0114596 3 2 5 94 X 8995191 8995210 CAGAAAGTCACGTGATGTGG 59 8993482 8995134 CATAGTCGATATGCTGCGG 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595 1 1 5 163 X 8989677 8991398 CTTCAATACGGGCATGCTC 59 8989532 8989550 GATCTGTTACCGCTTTGGC 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 1 3 5 80 X 8992442 8994560 AGCGCATCCATCTAGATCAG 59 8992381 8992402 CATTGATGTAGCCCGATTTGAG 59 NA Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0112972 3 1 2 105 X 9927489 9927508 TACACGACCCACTAAGAGTG 58 9927573 9934733 ATAACGATTCGTGACAATGTCC 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273266 1 1 2 176 X 10832780 10835759 CTCATCAAAGGCAAGCCAC 59 10835894 10835917 GAATGTGTAGATTAGACCCTTGTC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 3 7 15 109 X 11275916 11275936 TATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0301288 1 2 15 83 X 11270677 11270695 TCTGGTCAACGATCTTCGG 59 11270740 11270883 GATGAGCTTTCTGTATGTCCG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 3 4 15 123 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299398 11299416 AAGGTCATCGTTGATGCGA 59 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 3 2 4 164 X 11567983 11568085 GCCATACAAATCCCAGCTC 58 11568213 11568231 GCTGTAGCGTATTGTAGCC 58 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 3 2 10 88 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848306 11856053 TGAGTTCGAATCATCGTGC 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 2 6 7 81 X 12168211 12168229 ATTCCCGTTGCGTAATTCC 58 12168271 12170563 GCGTTTATCTATGTGAAACCTG 57 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 1 4 4 81 X 12550119 12550138 TGAACTATTGTCGTAGCCTG 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748 1 1 3 80 X 12979679 12979698 ATGTGCCCAATTGGTTTCAG 59 12978593 12979638 AATTAGGTAACCTCTGGAGCG 59 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 3 3 3 85 X 13221559 13221577 TTCTCATGCACGATCTGCT 59 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073773 2 1 6 124 X 13265392 13267908 CCCATCAAGAAATAATGAGTCG 57 13267993 13268011 GTGCAGGAACGATTTCCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 3 7 10 124 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488362 13488380 TTCTCGTTCGAGTCCTTGG 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303 1 1 4 80 X 13702515 13702833 ATACAGATACCAGCTCCCAC 58 13702873 13702894 ATGTGGGTAGAATTGCTAATGG 58 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 1 2 2 116 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100700 14100720 CATCCGTGACTCCAAATATCC 58 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 2 3 3 80 X 14142420 14142579 GAATTCCTAGCACATAACTATCCC 59 14142617 14142636 GTAAAGGCAATCCAAAGGCA 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0300434 1 1 8 83 X 14824162 14824181 TTAAGGTGGCCCTGATAGTG 59 14824483 14824797 CTTCTACTGTAAGCGTTCTTAAGTG 59 NA Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026 2 1 2 198 X 15038450 15038468 GACAGTGTCAACATCCAGC 58 15036018 15038288 GTGTGGTTCGGTTTCTTCG 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074012 3 1 3 106 X 15276719 15278951 CGGTATCGTAATGCAAAGACG 59 15276633 15276651 CATGGAGAGGAACAGGACG 59 NA InUTR Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 3 2 2 108 X 15691391 15691477 TCCACCTGCTGATATTAGAAGG 59 15691304 15691322 CACTATTGGAACGAGCAGC 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 3 5 9 135 X 15714505 15714523 GAGAACCAGGAAGCAAGTC 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 1 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 1 3 4 80 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190094 16190114 ATATTATCACTGGTCATGGGC 57 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 3 3 3 110 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494497 16494515 AGGATAAGGCATCGTTCCC 59 NA Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323 2 1 2 89 X 16606047 16607823 TAAATTCAAGGCGTCAGCAG 59 16607875 16607893 GATTCCCTAGAGTGGTGGC 59 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354 2 1 2 180 X 16693604 16694569 CGTGGTTATAGAGCGGGAG 59 16693442 16693460 AGCTATCTGAAACCGCCTC 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991 2 1 6 99 X 17157003 17162564 GGATATTTGCTACTTCTCCACG 59 17162624 17162642 CTTGGACTTCTGCTTGCTG 59 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 3 3 3 80 X 17466487 17466567 TGCTGAAATGAATCTCTTCCC 58 17466427 17466448 CTAGAACTGGTTCCAGAATACC 58 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 1 3 3 80 X 17542201 17542219 CTCAATTACCGAATCGCCA 58 17541816 17542158 GTACACGCAAATAAGACCAC 57 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 1 3 4 175 X 17767426 17771464 TAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 1 2 6 80 X 17794853 17797990 TTCACCCAGGCATATAGCA 58 17798034 17798052 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089661 2 1 8 122 X 17933207 17933225 CTCCCAGAACAATCCATGG 57 17847365 17933121 AATTTGGGCAAAGACTGGT 57 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593 2 1 2 94 X 18412047 18412863 GTTCGAGCTGAAGGAAGTG 58 18412920 18412939 TCATCGATAGGATCTCACCG 58 NA Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0074649,FBtr0113004 3 2 2 200 X 18801687 18801767 CTACATTGGTGATGCTGCG 59 18802347 18802366 TAGAAGTAGCGCGAGATGTC 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302859,FBtr0302861,FBtr0302860 1 3 6 172 X 19418033 19418052 AATCCATAGCCAGTTTGGTC 58 19418186 19419220 GGCGATTATCTTGTCATCGT 58 NA Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 1 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074817,FBtr0074815,FBtr0074816 2 3 3 124 X 19638347 19638365 TATAGCTATCGCCAGGCTC 58 19635182 19635200 TGTCTGACGATTTGTCGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0077340 1 1 2 72 X 20126835 20126853 TCCGTTTATCAATCCGCAG 58 20126690 20126800 GCTGAGTCCCTTATCAATGG 58 NA DesignRelaxed Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112571 1 1 5 130 X 20655398 20655416 TCTTCCTGAAGAAGCAGGG 59 20647267 20655307 TAAGATTGCCTGAAAGAAGAGG 58 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 3 5 5 81 X 20644230 20644251 TAACGCTAATATACAGGGTGGT 58 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 3 2 2 101 X 20918348 20918366 GATTACGCCCAACATCCTC 58 20918431 20918593 CACTTGGCATACATCTCGC 59 NA Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 2 1 1 95 X 21028059 21028078 CAGAACGATTAACGCTCCTC 58 21027587 21027605 GTACCGCTCACGTAGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32511 FBgn0052511 FBtr0077258 3 1 1 96 X 21028061 21028079 CCAGAACGATTAACGCTCC 58 21027587 21027605 GTACCGCTCACGTAGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 2 3 5 137 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887885 21887903 AATCGGCGATGTTTGAGGA 59 NA InUTR Drosophila melanogaster 61 CR32745 FBgn0052745 FBtr0070932 2 1 1 167 X 6174523 6174541 AATGTGAAGGTGTATCGCG 58 6174325 6174343 TATGGAATTCCACGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 3 4 4 97 XHet 9417 9492 GAGCTGGCATGACAATACC 58 9551 9571 GTCGTGCATAACACAAATGAG 58 NA Drosophila melanogaster 61 snmRNA:430:CR33737 FBgn0053737 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:35Ba FBgn0028912 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-275 FBgn0067719 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-124 FBgn0067341 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-281a FBgn0086606 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32285 FBgn0052285 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32420 FBgn0052420 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V4:70BCb FBgn0012010 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:90Ca FBgn0011944 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 1 4 4 88 XHet 12051 12367 GATGATAACGATAATCGGAGACAC 59 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 snoRNA:Me28S-U1688 FBgn0086044 FBtr0114320 3 1 1 99 X 9824010 9824028 GATTCATGACCAGAGGTGC 58 9823929 9823947 GTGAATCTTCCACTGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 2 3 3 115 X 11985772 11985853 AAGACTGAGAAACGCACAC 58 11985932 11985950 TTAATTAGCGCCACGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 tilB FBgn0014395 FBtr0077345 3 1 1 81 X 21851783 21851863 GGTGCTTATCACCGAAGAG 58 21851908 21851926 CAAGGAGATCTCTTCCAGC 57 NA Drosophila melanogaster 61 CG33502 FBgn0053502 FBtr0070055 1 1 1 103 X 21482188 21482206 GAGAGCTTGAAGTTCCTGC 58 21481052 21482121 AGCAATTTGGCCAAAGGAC 59 NA Nonspecific Drosophila melanogaster 61 CG42580 FBgn0260870 FBtr0301564 1 1 1 60 X 20445506 20445524 GACTACCCAGAAGAAGCGT 59 20445546 20445566 TTCCAGGTCCTCTAGTTTCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sdic4 FBgn0053499 FBtr0089612 3 1 1 80 X 20095849 20095936 GTATTCTACTTTGAGCGGCG 59 20095788 20095807 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 Or19a FBgn0041626 FBtr0070029 2 1 1 66 X 20036010 20036028 TCCAATGATCCTGGTCTCC 58 20035909 20035983 CTTAATCATCACCGTGAAGGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15322 FBgn0031088 FBtr0301569 2 1 1 139 X 20031046 20031507 CACTTTATGCGTATCCGCT 58 20031610 20031628 CAATGCTGTCGGAGATGTC 58 NA Drosophila melanogaster 61 amn FBgn0086782 FBtr0074802 2 1 1 138 X 19781355 19781373 CCAATTCGAACAGCTGAGC 59 19781235 19781253 GTAAGAGCGCTTACAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 3 2 2 124 X 19601494 19601583 GACGAACTACAATGGAGCG 58 19601388 19601406 TCTTCTTCAGCGTTGTCGA 59 NA Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731,FBtr0074732 3 2 2 68 X 19492187 19492206 GTATTACGATACGTTCGCGT 58 19492234 19492482 CCTTTGGCATAAACATTCTGGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8051 FBgn0031012 FBtr0074683 2 1 1 80 X 19197498 19197516 TGGTCTAGGAATCTCCAGC 58 19197116 19197455 TTCAGCAGACCTGTAAATGC 58 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659 3 1 4 223 X 18690538 18690558 CGACAGGCAATTTCAATTCAG 58 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6540 FBgn0030943 FBtr0074601 1 1 1 293 X 18542479 18542556 TATAAGTTTCGCCACCTCG 57 18542813 18542831 TCATTCGTGTGATAGCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6762 FBgn0030876 FBtr0074492 3 1 1 192 X 17751675 17752096 ACCATTAAGAACGAAACCAGC 59 17752248 17752268 CCATGTAGTGATACAGATCGC 58 NA Drosophila melanogaster 61 CG5800 FBgn0030855 FBtr0074453 1 1 1 102 X 17530778 17530872 TCTCATACCCGTTCTGGAG 58 17530938 17530956 GATCTGGTAGGCTAGCTCG 59 NA Drosophila melanogaster 61 mei-217 FBgn0028581 FBtr0299824 1 1 1 119 X 17035784 17036307 ACACTGGTCCTACAATCGA 58 17035471 17035489 TTGGTATTCACTCATGGGC 57 NA Nonspecific Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0290020 3 1 3 87 X 16995976 16996436 ATGTTGTCAATGCAGCAGC 59 16996485 16996505 TCTGTCTTCCGGTTATTTCCA 59 NA InUTR Drosophila melanogaster 61 CG8949 FBgn0030812 FBtr0074412 3 1 1 85 X 16967347 16967365 GAGCGGTACAGCTTTATGC 59 16967215 16967298 CGCCGATCACGTTTATCTG 59 NA Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 3 2 2 81 X 16444489 16446383 TCGAAGTCAAGGATCTGATGG 59 16444428 16444446 CCGTTCTCCATCGGATAGG 59 NA Drosophila melanogaster 61 CG3679 FBgn0027521 FBtr0074222 3 1 1 88 X 16198929 16198947 CGGATGATAGGAAAGCCGA 59 16198998 16199200 CTTTGTGCCTTGAAGTTCGA 59 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112,FBtr0074113 3 2 2 60 X 15762639 15762657 TACATCGTGGAGTCCACTG 58 15762681 15762699 CCTTCAAGTGAGTGGATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-LE FBgn0030695 FBtr0074183 2 1 1 108 X 15696003 15696024 GCAACTGCCTGTTAAATATGTG 58 15695629 15695719 CTCAATGTGGAAGCACTGC 59 NA Drosophila melanogaster 61 CG9213 FBgn0030655 FBtr0074071 1 1 1 254 X 15467257 15467329 TAAGCAAATGTTCGAGCGG 58 15467021 15467039 AGCTGTTTGTCCAACTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074080,FBtr0074079 1 2 2 95 X 15343739 15343757 ATCTGGACAATCCGTTTGC 58 15343466 15343489 CGAATGGATTGTAATCCTCAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 3 2 2 81 X 14880361 14880379 CTGCAATGAGTCCTTCTGC 58 14880424 14884362 GAAGCCGCATACATACCTG 58 NA Drosophila melanogaster 61 CG14410 FBgn0030583 FBtr0073948 3 1 1 60 X 14731078 14731097 TGAGTATCCCAATGAAGAGC 57 14731119 14731138 TTGAGCGGGATTTCTAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11134 FBgn0030518 FBtr0073818 3 1 1 103 X 13632395 13632479 GAGCATTAAGTACAACGATGAG 57 13632542 13632561 GATCCTTGCCGGTTATATCC 58 NA Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 3 1 1 149 X 13509757 13509775 AGATCTACACGTATCCGGC 58 13509370 13509388 TGCTCAGTCCCAGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32639 FBgn0052639 FBtr0073734 1 1 1 63 X 13130443 13130461 TGATCTGACCAGCAACGAG 59 13130398 13130416 CAATTCATCATCGGTGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bap60 FBgn0025463 FBtr0073741 2 1 1 84 X 13052004 13052022 GTTCTTCCTAAGCTTCGCC 58 13051878 13051957 GGTCATCAGCTTCAAATCCC 59 NA Drosophila melanogaster 61 CG32638 FBgn0052638 FBtr0300453 3 1 1 127 X 13020131 13020149 CATGTTCTGGTCGATGCAC 59 13017712 13017816 CCCAGCCATTCATAATGCC 59 NA Drosophila melanogaster 61 mRpL49 FBgn0030433 FBtr0073691 2 1 1 164 X 12801266 12801348 AAGCTAAGCCAGCTTACCA 59 12801476 12801494 TACTGTCTTCGCTGGTAGC 59 NA Drosophila melanogaster 61 inaF-A FBgn0085351 FBtr0112524 2 1 1 146 X 11627703 11627723 ATTCATCTCAAGTTTCCCGTC 58 11621345 11621363 TTCCGATGAGTTCAGGAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 FucT6 FBgn0030327 FBtr0073620 1 1 1 80 X 11601669 11601752 CATTGTTGGCGTTCATGTC 58 11601607 11601628 TAGGTCATATACTCCTCCACAC 58 NA Drosophila melanogaster 61 CG2444 FBgn0030326 FBtr0073531 3 1 1 200 X 11598767 11598863 GAACAATTCATCGCATCCC 57 11598585 11598604 AATTCGCGATTGATGTTCAC 57 NA DesignRelaxed Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 1 3 3 80 X 11498697 11498778 TACATTTCCAGGACGATCCC 59 11498821 11498839 TGTAGATGAACAGGGTGGC 59 NA Drosophila melanogaster 61 CG11697 FBgn0030313 FBtr0073511 2 1 1 60 X 11466988 11467008 GCCTTTGATTATTTCACAGCG 58 11467027 11467048 CCTTGAACTCACTTAGCAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1545 FBgn0030259 FBtr0299600 1 1 1 80 X 10952447 10952467 CAGATGGAGAATTTAAGCGAC 57 10951823 10952405 AGTACGGATAAATTGGCGG 57 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 1 2 2 86 X 10855204 10855310 CTTCCGCAATGACCAACTG 59 10855360 10855378 TTGACCAGTTCCGCATAGG 59 NA Drosophila melanogaster 61 CG2186 FBgn0030243 FBtr0073381 2 1 1 97 X 10752398 10752481 TACTCTCGGACGAAGAGCT 59 10752541 10752560 CTGTCTAATCTGCTCCTGGG 59 NA Drosophila melanogaster 61 CG15209 FBgn0030237 FBtr0073378 3 1 1 62 X 10736359 10736377 CATGAATCCCGAACAGGAG 58 10736403 10736421 TTATGCTGACGTTGCTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071467 1 1 3 97 X 10268300 10268383 GTTCACATAATCGCCAAGCA 59 10268222 10268240 CGGGTATCTTGGTTACGGT 59 NA InUTR Drosophila melanogaster 61 CG2962 FBgn0030186 FBtr0071486 3 1 1 215 X 10110147 10110592 TCAGCATGAAGGTCTTCGT 59 10109950 10109968 GATGGATCACCTTGACCAC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 l(1)G0230 FBgn0028342 FBtr0071438 3 1 1 120 X 10107459 10107477 TCGATGTGCCTTCCTTCTC 59 10107635 10107653 AAGAACTTGAGGGTCTTGC 57 NA DesignNoJunction Drosophila melanogaster 61 amx FBgn0000077 FBtr0071331 1 1 1 60 X 9140283 9140302 ATCGATGTCCTGCTCATCTC 59 9140242 9140262 ATATGTAAAGTGAGCCATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15366 FBgn0030080 FBtr0071355 2 1 1 71 X 8967114 8967132 CAAGCGCCTCGATATACTC 58 8967061 8967079 GCAAGGATAATGGTGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12081 FBgn0030053 FBtr0071218 3 1 1 60 X 8483247 8483265 GGCGACTTCATCTACAGCT 59 8483287 8483307 GCTCATTGTAGCGATAATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17982 FBgn0030006 FBtr0071191 3 1 1 60 X 8037122 8037141 GACAAAGGTGAATACAGCCA 58 8037081 8037099 GATAATCGTGGACGTGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114 3 1 3 122 X 7984174 7986007 AACAATAGTTGCAAGCAGCTC 59 7984072 7984090 GTTACATCCGCTATCCGCT 59 NA InUTR Drosophila melanogaster 61 Ir7b FBgn0029965 FBtr0071149 3 1 1 106 X 7760113 7760184 TCGATGAGATCTTTGGCCA 58 7760025 7760045 CATGAAGTAGTAGGTGGACTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0300836,FBtr0071078 3 2 2 60 X 7608236 7608254 GTTTAATGGCAGCCACACC 59 7608194 7608215 AAGAAATTATTTGGTCCCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4615 FBgn0029935 FBtr0071020 3 1 1 117 X 6993680 6993769 CTACCAGCAGGTCTTCCAC 59 6993581 6993600 CATCATACCGTGGAAGTGGT 59 NA Drosophila melanogaster 61 CG14440 FBgn0029894 FBtr0070987 3 1 1 72 X 6592179 6592200 AGTATCTCAGCTATGAGAGTCC 58 6592128 6592148 TTGTTGTACTCTAAGAGGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33665 FBgn0053665 FBtr0302414 2 1 1 129 X 6372747 6372826 GATTCTTGACTACTCCGAAGC 58 6372638 6372656 CTCTTGTCTGATATCGCGT 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 2 2 2 80 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997042 5997061 ATTCCGCCGTAATTCAAGGA 59 NA Drosophila melanogaster 61 Mipp2 FBgn0026060 FBtr0070884 2 1 1 81 X 5978076 5978263 GCCATTAGTTCCTCTGAGGA 58 5978014 5978032 ATTTGAGAAGCGTACCCGA 59 NA Drosophila melanogaster 61 Bteb2 FBgn0025679 FBtr0070735 2 1 1 60 X 4665390 4665410 TGGCAACTATAATCAGCTGGA 59 4665350 4665368 GTCCAATGTGATGATGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7024 FBgn0029722 FBtr0070712 3 1 1 128 X 4599601 4599619 TGAAGTTCAGTTGTGTCCG 58 4599711 4600047 ACTTGAACGTGTTCTCCAG 57 NA Drosophila melanogaster 61 mRpL30 FBgn0029718 FBtr0070682 3 1 1 106 X 4542114 4542213 ACCTACTATCCCAGGACTCC 59 4542282 4542300 TTCTCCCAGTAGGGATTGC 58 NA Drosophila melanogaster 61 lva FBgn0029688 FBtr0070626 1 1 1 80 X 3858652 3858670 CCGACGATCACGAATATGG 58 3858521 3858610 CGGATACATTCTGTAACGAGG 58 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 3 3 3 82 X 3360656 3365919 GCCCAATGTCAAGAACTATATGG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 ng3 FBgn0010295 FBtr0070539 1 1 1 60 X 3136036 3136054 GTTGCCTGTCTGCTAATCC 58 3135994 3136012 CAGAAGTTGAGGTTGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng2 FBgn0010294 FBtr0070540 3 1 1 82 X 3134304 3134322 CAAGAGGCCAAAGAAGGTC 58 3134240 3134258 ATCTGCGGTTTCTACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302449 2 1 4 103 X 2476601 2477037 CGAACTGAATCTTCTTTACCATCC 59 2477099 2477117 CATCACCTGTTCACTGTGC 59 NA InUTR Drosophila melanogaster 61 pdfr FBgn0260753 FBtr0070436 3 1 1 80 X 2470077 2470158 ACTGGAAAGCGAATATCACC 58 2470200 2470219 CTCGTGAATCATCACAATGC 57 NA Drosophila melanogaster 61 Ilp6 FBgn0044047 FBtr0070406 3 1 1 100 X 2225868 2225967 ATGTATTTCCCAACAGTTTCGG 59 2225789 2225807 CAAGAGCTCCCTGTAGGTG 59 NA Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 1 2 2 80 X 2160701 2160867 CGCAGTACAAGCAAGAAGG 59 2160639 2160659 GTCTTGTCTCTGACTTTGACG 59 NA Drosophila melanogaster 61 Cyp4d14 FBgn0023541 FBtr0070426 2 1 1 82 X 2069156 2069174 GATACGAGGACCCAAGAGC 59 2068939 2069115 GCATATCAAAGATAGTCTTGGGTG 59 NA Drosophila melanogaster 61 CG12773 FBgn0024365 FBtr0070235 3 1 1 184 X 1246470 1246488 TTCGTGGAGAACCTATGGC 59 1246247 1246322 AAGTACAGGAACGTGGAGG 59 NA Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 2 2 2 88 X 971124 971254 ACAATCGAACAGCCATGGA 59 971054 971072 ATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 CDC45L FBgn0026143 FBtr0070182 3 1 1 88 X 923508 923526 AGTGCCTCCAAGATAACCT 58 923386 923456 TAGCGGGAATACCTCATGG 58 NA Drosophila melanogaster 61 Rbf FBgn0015799 FBtr0070146 2 1 1 80 X 694210 694230 AGCGTTTCCGCATTATTATGG 59 694088 694171 CATGCAGAGAAATGTACTTGGA 58 NA Drosophila melanogaster 61 CG13364 FBgn0026879 FBtr0070159 1 1 1 76 X 519117 519199 GTATAAGCGAGCAAGTATGTCTG 59 519063 519081 CTTTGGAGTCCTTCTTCGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070093 1 1 2 97 X 386658 386790 AAGGTGGACTAAATGGCCC 59 386579 386597 TTCGACTCAACGAACTTGC 58 NA InUTR Drosophila melanogaster 61 CR41591 FBgn0085808 FBtr0114262 1 1 1 99 U 7776166 7776184 AACTAGCTGTGCTACGACG 59 7776085 7776104 CCTCTGTCAAAGTACAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42420 FBgn0259851 FBtr0300149 1 1 1 210 U 7243228 7243246 TACACAGCCAAATTCGAGC 58 7243036 7243054 TCTTTGGTGAGGACTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42419 FBgn0259850 FBtr0300147 2 1 1 153 U 7175849 7175867 GCAGTGCGTTAATATGGCC 59 7175980 7176002 CCAGGTGATTACCACTATTAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42418 FBgn0259849 FBtr0300146 1 1 1 60 U 7084112 7084130 ATGCCACTCAAATCGTCCA 59 7084070 7084088 AGTACTAGCTGACCGAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42417 FBgn0259848 FBtr0300145 1 1 1 60 U 6871441 6871459 CCGCAGTGCATTGATATGG 59 6871483 6871501 TAGGGCAGAGGTGTATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40625 FBgn0085503 FBtr0302234 3 1 1 80 U 5511406 5511488 AAGAATGGACCTACAGGGA 57 5511531 5511550 CCTGTGTTACAACAATCGAC 57 NA Nonspecific Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 3 3 3 87 4 663173 663196 GGATATCGGATTGTATAGTCACCA 59 663046 663128 TGGCTCTGACTCAAGAATGG 59 NA Drosophila melanogaster 61 TwdlU FBgn0037223 FBtr0113190 1 1 1 119 3R 70198 70217 GACCAAATGTAATCTTCGGC 57 70296 70371 GGCTTAGAATTAGAAAGATGCG 57 NA Drosophila melanogaster 61 tRNA:CR31070 FBgn0051070 FBtr0085086 1 1 1 60 3R 22773283 22773305 GGTTCTATGGTGTAATGGTTAGC 59 22773245 22773263 AGATTTGAACTCGGATCGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 lox FBgn0039848 FBtr0085810 3 1 1 134 3R 27284645 27284663 CTGATGGACAGTGAATGCC 58 27284474 27284492 AACTCGGGTAACATCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31010 FBgn0051010 FBtr0085725 3 1 1 149 3R 26531793 26531812 AATTCAGAGTGCAGTTTCCA 57 26531598 26531616 TCACTAGGGATGTACAGCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 PH4alphaEFB FBgn0039776 FBtr0085650 3 1 1 85 3R 26310458 26310955 CCACCGTTCTATTCTATATGAGTG 58 26310999 26311017 CTTCTTGGGAAACAGAGCG 58 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 2 1 1 109 3R 26038055 26038131 AATCGAACGTGTTGGTCAG 58 26038202 26038222 ATAGTCATCGTGGTTAACCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 2 2 2 82 3R 26021214 26021232 AACTGCTCAAGGATGTGGA 59 26021088 26021171 GTACAGCAGGACATAGAATCTC 58 NA Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 3 2 2 98 3R 25873355 25873436 AACGCATTCAGGTATGTGG 58 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 Sry-delta FBgn0003512 FBtr0085558 1 1 1 60 3R 25870028 25870046 GAAGAAGTACCAGTGCGAG 58 25870068 25870088 GTTGTAGAGTAGGTTGTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nlp FBgn0016685 FBtr0085552 2 1 1 92 3R 25830770 25831022 ATTCTACGGAGTCACTTTGAC 57 25831075 25831094 TGTTTGATGACCAGCTTCTG 58 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 1 2 2 99 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628322 25628340 ATTCATCGAGTGCTTCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7837 FBgn0039696 FBtr0085537 1 1 1 80 3R 25624002 25624022 CTCGAGATTCTGAAGTGTCTG 58 25623885 25623962 GGTATTCCAGGAAATGGACTC 58 NA Drosophila melanogaster 61 CG7567 FBgn0039670 FBtr0085472 3 1 1 118 3R 25413411 25413429 CATTGTGGACTTCGTGCTC 59 25413213 25413232 AATGGATCTTGATCTGGACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085434 1 1 2 75 3R 25318460 25318979 TATATCTGATACTCCTGCGAGC 59 25318406 25318424 TAGAGTAGGGACAGGGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 3 2 2 89 3R 25065691 25065951 CACAAAGACATTGAACCCAG 57 25065621 25065640 ATTGTAGGTCGAATTGGGTG 58 NA InUTR Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 1 2 2 83 3R 25058455 25058473 GATATTTCTGTGCCGGTGC 59 25058517 25058593 GCAGGAATTCTGTATGTAGGTG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367,FBtr0085369,FBtr0085366 1 4 4 80 3R 24939161 24939723 GTGCTTACAAGGTTTCCCG 59 24939767 24939785 AGCCCATCTCTGTGATTGG 59 NA Drosophila melanogaster 61 Mst98Ca FBgn0002865 FBtr0085277 2 1 1 64 3R 24117296 24117314 GTATTCCACCTCCCTTCCC 59 24117342 24117360 TTTCTTGCAGATCATGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 3 5 5 149 3R 23529755 23529774 GATCCGATGTACACCAAGAG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 2 1 1 78 3R 23314971 23314989 ACCTTCAGTTGAGTCAGGA 57 23315029 23315105 AACTTTCCCAGCATTTCTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14262 FBgn0039503 FBtr0085177 3 1 1 71 3R 23090474 23090492 TTCCGGCATAACATCATCG 58 23090368 23090386 GATCAATGATGCGCCTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5909 FBgn0039495 FBtr0085114 2 1 1 106 3R 22987240 22987258 TCGTGCAGAAGATTCTCGG 59 22987327 22987470 ATGGAAGTCCCTCGTATTCG 59 NA Drosophila melanogaster 61 TwdlH FBgn0051080 FBtr0085032 3 1 1 120 3R 22459523 22459604 TCCTTATTGCTCTGTGCCT 58 22459687 22459706 GAAGGAGAGTAACTGGGTCC 59 NA Drosophila melanogaster 61 Hex-t2 FBgn0042710 FBtr0085011 3 1 1 81 3R 22277006 22277114 AGAATGTGGTGAGTCTTCTCC 59 22277156 22277175 GTATCGTTGAGAATGGCGAC 59 NA Drosophila melanogaster 61 CG31086 FBgn0051086 FBtr0084989 2 1 1 102 3R 22011375 22011464 AATCGAAATGGACGGTCAC 58 22011530 22011548 AATGAAGATGGTGTCGCCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983 2 1 2 84 3R 21751612 21766986 TTTATGAGACCGAACAGTTTGC 59 21751549 21751568 AACATCACGAACAGAACAGC 59 NA Drosophila melanogaster 61 alpha4GT2 FBgn0039378 FBtr0300129 2 1 1 143 3R 21658333 21658351 CTCTGTGGTCCAATTGACG 58 21658457 21667605 TTATGCAAAGCCCTGATCAG 58 NA Drosophila melanogaster 61 CG11875 FBgn0039301 FBtr0084812 2 1 1 102 3R 21074245 21074263 AATGTCCGTCAAGAGTCAC 57 21074386 21074404 GATGACTGTCTGCTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 dan FBgn0039286 FBtr0084803 2 1 1 201 3R 21011078 21011097 CTATCACCGAATTTCTCCCG 58 21015717 21015735 GATGGCATGGATCTTGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089439 2 1 2 97 3R 20743223 20743440 AAGGACGAAGATGGTCGTG 59 20743144 20743162 TTCGTTTCAAGGATGTCGC 58 NA Nonspecific Drosophila melanogaster 61 CG13640 FBgn0039237 FBtr0084730 2 1 1 60 3R 20687628 20687652 GCATATAATTCCTACTCTTACCCAG 58 20687592 20687614 CTTTGGAGTATGAGTAAGAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 niki FBgn0045980 FBtr0084737 3 1 1 96 3R 20649804 20649879 GAACAAAGGGTACTCCTATGAG 58 20649729 20649748 CATGGACACATTGCTGTAGG 59 NA Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 3 2 2 80 3R 20340085 20340103 CTGTATGTGCCATCTGAGC 58 20339966 20340044 CAGAGTTACTTCATAGTTGCCA 58 NA Drosophila melanogaster 61 CG31128 FBgn0051128 FBtr0084638 2 1 1 82 3R 20295416 20295488 AGTACAACGTTACGGGTCC 59 20295534 20295552 GTAGATTCCGGCCAATTGC 59 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530,FBtr0084602 2 2 2 82 3R 20116541 20116560 AGATACGAGAACTGTTCCAC 57 20116605 20116680 GATATCACGTGGCACTCTC 57 NA Drosophila melanogaster 61 mRpS24 FBgn0039159 FBtr0084577 2 1 1 88 3R 19989000 19989018 AACAGGCCTCTTACCTACG 58 19988873 19988949 TTCATTGTTGACGTGTTCCA 58 NA Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 1 2 2 80 3R 19588320 19588341 TCTTTAACGAGAACTTTGTGCC 59 19588143 19588279 GGAATCGGTTCTGGTACGT 59 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 3 1 1 255 3R 19586064 19586175 TGCCGCAAATCTTGTTAAGTC 59 19585757 19585775 GGATGGAGCTATGAAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG34289 FBgn0085318 FBtr0290252,FBtr0112485 2 2 2 60 3R 19332950 19332970 ATATCCGCACCACATATCCTG 59 19332910 19332931 CAAATACTTCTTTAAGCACGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 1 2 2 125 3R 19198715 19198787 AAATGAACCTTTGCACACCA 58 19198875 19198893 TAGCCAGGATCACAGTTGC 59 NA InUTR Drosophila melanogaster 61 CG4434 FBgn0039071 FBtr0084382 3 1 1 83 3R 19114369 19114390 ATCCGAGCTTATTATCGAACTG 58 19114246 19114328 GGACATATGTTCGGTAGTTGAC 59 NA Drosophila melanogaster 61 CG17121 FBgn0039043 FBtr0084361 3 1 1 80 3R 18871184 18871258 CTACATAATGACCACCAAGGAG 58 18871125 18871143 GCTAAGGCATTTACTGCCA 58 NA Drosophila melanogaster 61 Rpn7 FBgn0028688 FBtr0084294 2 1 1 60 3R 18287208 18287226 TCGTGTTCCATCTGATCCG 59 18287166 18287184 TTGCGAGTGATGAGATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218,FBtr0301029 3 3 3 80 3R 18208162 18208182 AGATCATAAACACTCGTCACG 58 18208222 18208300 GATCATTTACAGCGATCAGGT 58 NA Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 2 2 2 81 3R 17604913 17605282 ATCTATAGGAATCTGAGTGGCC 59 17604853 17604872 ACTCCATGTGAAAGTCTCCA 58 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084054,FBtr0084053 1 2 2 60 3R 17084708 17084726 TAGTCATCATGCTGCTGGG 59 17085196 17085215 GTCTTCACAATCACGATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 e FBgn0000527 FBtr0084106 2 1 1 80 3R 17056582 17056600 TGTCCGCATCTGAAGATGG 59 17056454 17056541 GAAGCTAGCCACAATAATGTCG 59 NA Drosophila melanogaster 61 CG10824 FBgn0038865 FBtr0084028 1 1 1 60 3R 16986696 16986714 AGCTACTACGGATGAGGAC 58 16986654 16986672 CAGCACTATTCGGGATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15695 FBgn0038832 FBtr0083967 1 1 1 80 3R 16669084 16669173 CTTCAGGGATACAACAAGATGG 58 16669212 16669232 CGCGTAGGTCTTGTTAAATCC 59 NA Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 2 2 2 82 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401269 16401288 ATAAGATTTCCGTGACGCAC 58 NA Drosophila melanogaster 61 MtnD FBgn0053192 FBtr0083902 1 1 1 165 3R 16360755 16360839 GTGGAACAAACTGCCAGTG 59 16360966 16360986 CCAAAGGGTCTTTCATCACAC 59 NA InUTR Drosophila melanogaster 61 Sirt2 FBgn0038788 FBtr0083882 1 1 1 98 3R 16154685 16154759 CATATCTACATCTGCTGGCA 57 16154820 16154838 AATATGGCCGTAGGATGTG 57 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 1 2 2 80 3R 15725645 15725663 CTGTGAAGTCGATAGCCCA 59 15725518 15725605 GCAGCAGTTGTTCCATTATAGAG 59 NA Drosophila melanogaster 61 CG31459 FBgn0051459 FBtr0083812 3 1 1 138 3R 15667081 15667101 GATTGACCTGATACATCGTCG 58 15667201 15667283 GCAGCTCATCTGCATACTG 58 NA Drosophila melanogaster 61 CG31220 FBgn0051220 FBtr0302358 3 1 1 83 3R 15475705 15475725 GCATAATGACTACGATCCAGC 59 15475770 15475851 ATCGTATATCGCACTGGCT 58 NA Drosophila melanogaster 61 CG3734 FBgn0038700 FBtr0083755 3 1 1 84 3R 15213842 15213863 GATGTAGTTCAAACCCTTTGGA 58 15213908 15214004 GCATATAGCGCATTTGCCA 59 NA Drosophila melanogaster 61 CG14282 FBgn0038685 FBtr0083734 3 1 1 60 3R 15002852 15002870 AACGACAACGATGTGAAGC 59 15002888 15002912 CCTTTAGCTCTAGATTCAGATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 1 2 2 130 3R 14677252 14677270 TTTAACTCCTGGTGCGGAG 59 14677087 14677159 CTTGCAAGAGATGTTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG14299 FBgn0038651 FBtr0273382 3 1 1 80 3R 14577344 14577363 AAGCACTCAATCTGATGCTG 58 14577225 14577304 GAGCCTTAATGTGTATGTTGGA 58 NA Drosophila melanogaster 61 CG7718 FBgn0038649 FBtr0083682 1 1 1 174 3R 14570595 14570613 CATTCATCACGACAGCGTG 59 14570381 14570457 AAAGCCGTTTGCATTTGGA 59 NA Drosophila melanogaster 61 CG14312 FBgn0038596 FBtr0083599 3 1 1 177 3R 14109069 14109144 GTCGACAGGAACCTCTGAC 59 14108910 14108930 GAAGTTTCCATCGATGATGCC 59 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 3 4 4 83 3R 13678332 13678350 GTCGATCTGGTACGGAGTG 59 13678396 13678746 AAAGAGCATCCCAAGAACCT 59 NA Drosophila melanogaster 61 CG7713 FBgn0038545 FBtr0083513 2 1 1 80 3R 13621622 13621725 GGGTAGCCTACAATATCTATTGC 58 13621762 13621783 CAATGTTCGGATTCTGGATCTC 59 NA Drosophila melanogaster 61 CG14333 FBgn0038500 FBtr0083434 3 1 1 109 3R 13210395 13210413 CATTTCAGCAGCCATCTGG 59 13210485 13210504 TTGTTGATCAGCTCGGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 2 2 2 166 3R 12959026 12959045 TGCAGAACCAAGATGATGTG 58 12959173 12959257 ATACACATCCGGATAGCCAC 59 NA Drosophila melanogaster 61 CG3534 FBgn0038463 FBtr0083370 2 1 1 94 3R 12824287 12824520 GTAATCAAATTCAGCTCGCC 57 12824577 12824595 TTGTAGCCAAGGTCTTCAG 57 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 1 5 5 80 3R 12755406 12755425 AATGCGTATGTTTCCAAGCA 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 1 3 3 107 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636028 12636046 GAAGCGAGTGTAGGTCTGG 59 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 2 3 3 90 3R 11928090 11928112 TAGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 5 5 83 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723136 11723282 CTTTCAGTTGGTTGTAAGACTCC 59 NA Drosophila melanogaster 61 CG9593 FBgn0038365 FBtr0083178 1 1 1 129 3R 11627925 11628175 TGGCCAACATGAGCTAGTC 59 11628268 11628286 TACTTGCACAACTGCATCG 58 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152,FBtr0083153 3 2 2 160 3R 11367170 11367188 GCATTGAGACGGATCACCT 59 11366597 11367046 TGTGCCATTATTTCGCACC 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083079 2 1 3 117 3R 11137899 11138125 GAATATCTTAGGACCAACTGCT 57 11138203 11138221 TCCTTCTCAAGCTTCATCG 57 NA InUTR Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 3 3 3 113 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452027 CTCAAGGAATACCTTTAGCACAC 59 NA Drosophila melanogaster 61 CG14850 FBgn0038239 FBtr0082955 2 1 1 60 3R 10386713 10386734 ACATCGATCATCTTATCAGGAG 57 10386754 10386773 CCTCGCTACTCCTCAATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tal-AA FBgn0259733 FBtr0299996 1 1 1 99 3R 9639600 9639618 ATCCCACTGGAACATACCG 59 9639681 9639699 ATCAGCGTCTAGTACTGCC 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 tal-1A FBgn0259730 FBtr0299997 1 1 1 60 3R 9639233 9639251 TACACGGCATACGAAATGG 58 9639273 9639293 TGTAGCTTCTTTAGTACTGGC 57 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 2 3 3 91 3R 9157365 9157630 TGTTATGCTCAGGAATGCC 57 9157292 9157310 AACGCTCTCCAATATGCAG 58 NA Drosophila melanogaster 61 CG8476 FBgn0038127 FBtr0082781 2 1 1 60 3R 9045845 9045864 AAATCTCCGCAAGAATCCAC 58 9045804 9045822 GATACTGTGACCAAACCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33929 FBgn0053929 FBtr0091933 3 1 1 121 3R 8720119 8720200 ATCCCTACTGCTCACTCAG 58 8720016 8720036 GACGCGTATTTATATGTTCGG 57 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 3 2 6 84 3R 8522007 8522790 TCCATAGTCATGCAGGTGG 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 CG17207 FBgn0038051 FBtr0082682 1 1 1 60 3R 8264486 8264504 GGTTACCTTCGGATAGCCC 59 8264444 8264462 ACACCTGGAAGTACTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 1 2 2 80 3R 8180556 8180649 TGGATATAGCATCCCTTGGAC 59 8180496 8180516 CAATAGGCTGGTCATTTACCC 58 NA Drosophila melanogaster 61 CG4702 FBgn0037992 FBtr0082550 2 1 1 81 3R 7949094 7949198 TGTTATCTCCATGGGTCTTCG 59 7949033 7949052 GTTGTCGACCTTATCGATGC 59 NA Drosophila melanogaster 61 mRpL40 FBgn0037892 FBtr0082384 3 1 1 131 3R 7233730 7233813 CTTTGCCAGATTGAGTCTGC 59 7233907 7233925 TTGACAATCTGCGGATCCA 59 NA Drosophila melanogaster 61 KP78b FBgn0026063 FBtr0082408,FBtr0301427 2 2 2 60 3R 7173532 7173554 GGTGTCTGCTATTGAATACTGTC 59 7173494 7173512 CTCTGCCTTTAGATCCCGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14696 FBgn0037853 FBtr0082332 2 1 1 106 3R 6709204 6709281 GCTCGAGTATAAGGAACCC 57 6709116 6709134 AATAAGAGGTGCTCACGTC 57 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 1 7 8 88 3R 6417176 6419285 AGTCGACTCACTGATGGTG 59 6411626 6411647 AGAAGTTATCGCATAACTCGTG 58 NA Drosophila melanogaster 61 Invadolysin FBgn0086359 FBtr0082181 1 1 1 90 3R 5981456 5981556 TTGATAAATGACACCGTTCTCC 58 5981606 5981625 TATTGAGTCGGATAACGCCC 59 NA Drosophila melanogaster 61 CG9459 FBgn0037764 FBtr0082153 3 1 1 79 3R 5643876 5643895 TGCAAATCGCATACAATGTC 57 5643749 5643769 GCAACTGAAGTTATAGTTGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32939 FBgn0052939 FBtr0082085 1 1 1 87 3R 5519221 5519297 AGTTGATGAGGACCAAACCA 59 5519347 5519365 TAGCTAGCTTCCTTCGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG8358 FBgn0037727 FBtr0082081 3 1 1 119 3R 5502277 5502297 TGCTCTATAGATTCGATCCCA 58 5502375 5502455 TGAAGTTGTTAGCCATGTAGAG 58 NA Drosophila melanogaster 61 rump FBgn0260010 FBtr0082123 3 1 1 85 3R 5333096 5334021 GTTGCTAATCTGGACTACAAGG 58 5333032 5333050 GAAAGGTCTACGCTCTGCA 59 NA Drosophila melanogaster 61 CG8149 FBgn0037700 FBtr0082061 2 1 1 149 3R 5330383 5330403 ATCACTAACTAACTGTACGGG 57 5330568 5330586 TTATTTCCATTCACGGCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8132 FBgn0037687 FBtr0082029 1 1 1 109 3R 5227300 5227374 TAGCAACATCATGCGTTTGG 59 5227446 5227464 GTTTATGCTCCTTGACCGC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942,FBtr0091945,FBtr0091944 3 4 4 121 3R 5183829 5183847 GAAGACGATAAGGATGCCA 57 5184011 5184029 TCAGAATAACGATGCACGG 58 NA DesignNoJunction Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 1 3 3 95 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064806 5064824 TTCAGGTTGACGGATCCAG 59 NA Drosophila melanogaster 61 E(var)3-9 FBgn0260243 FBtr0082012 2 1 1 130 3R 4817567 4817585 CAGCTCCAAGGAGACTCTC 59 4817335 4817413 CTTCACCCTCTTCTAAGTGCT 59 NA Drosophila melanogaster 61 RagA FBgn0037647 FBtr0082013 3 1 1 81 3R 4809261 4809343 ATTATACAAAGCCTGGTCTTCC 58 4809201 4809219 TCCGAAATGTGTCACAGAG 57 NA Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301932 3 1 2 94 3R 4635384 4635463 TACTTTGGTCCAGGGTAGC 58 4635308 4635327 TAATGGTCTTGTCGATGGTG 57 NA Drosophila melanogaster 61 CG34301 FBgn0085330 FBtr0112497 2 1 1 69 3R 4599245 4599263 TGAAGACCTTTCTGGAGGC 59 4599295 4599383 AATTTGGTTTCTGGGCTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG8223 FBgn0037624 FBtr0081915 1 1 1 80 3R 4578769 4578787 CTGAGGTTCAGACTGAGCT 58 4578829 4578911 GTGCTTTCTCATAATCTTCGC 57 NA Drosophila melanogaster 61 Dhod FBgn0000447 FBtr0300442,FBtr0081890 1 2 2 256 3R 4478492 4478510 CGTCATGGATCAGGATCAC 57 4478200 4478220 TCTGGTCATCATGGTACTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 2 2 2 156 3R 4174325 4174344 CCAGCAAGTCCTAGAAATCG 58 4174517 4174535 ATCCAACTCCTGTCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ctr1B FBgn0062412 FBtr0081835 1 1 1 114 3R 4143505 4144166 CTATGATCATGGTGTTCCACG 59 4144242 4144260 AAGGACACCAGGAAGATGG 59 NA Nonspecific Drosophila melanogaster 61 CG31463 FBgn0051463 FBtr0081831 3 1 1 60 3R 4118590 4118611 TGAACAAACCAAAGATCGTGAC 59 4118630 4118650 CAGTAGTTCCACATGTATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11671 FBgn0037562 FBtr0081829 3 1 1 95 3R 4113877 4113895 GCTGATCGGAGGACTACTG 59 4113951 4114029 TTGAAATTTCCCTCCGTAAGTC 58 NA Drosophila melanogaster 61 CG9630 FBgn0037561 FBtr0081866 3 1 1 60 3R 4095545 4095563 TGTCTCGAAAGAAGTGGTC 57 4095503 4095521 ACTTGAAGCACTGCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11035 FBgn0037544 FBtr0081816 3 1 1 60 3R 3858392 3858413 AATCAGGCTTATGAGATTCTGG 58 3858353 3858373 CGATTCCCTTGTCGTAAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 3 2 2 85 3R 3833666 3833686 GTCAACACCAAGTTCTTAACG 57 3833218 3833620 ATTTCCTCATCAGATGCCTG 57 NA Drosophila melanogaster 61 MAGE FBgn0037481 FBtr0081606 3 1 1 60 3R 2980370 2980391 CTCGAAACTGTACGTTATGCTG 59 2980331 2980350 GTAGCCATGTTCTTCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 1 2 2 80 3R 2192121 2192140 CGAGGTTATCAAGATACGCA 57 2192000 2192081 GACTTGGAAATCATTCGAACTC 57 NA Drosophila melanogaster 61 Osi17 FBgn0037427 FBtr0078610 2 1 1 157 3R 2147714 2149541 AACTTTCGCCTGAAATAGCAG 59 2149736 2149754 GGGACTGTAGAACGGATCG 59 NA Drosophila melanogaster 61 Osi13 FBgn0037422 FBtr0078605 2 1 1 130 3R 2117867 2117885 AATATGCTGGAGACCTGGT 58 2118214 2118232 TTCAGGATCAAGGGTAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0078621,FBtr0273439 2 2 2 80 3R 1881011 1881140 AGAATACCCGAATCCTATACGC 59 1880952 1880971 GCACTATCATGTCCACTTCG 58 NA Drosophila melanogaster 61 ECSIT FBgn0028436 FBtr0078647 2 1 1 60 3R 1683265 1683283 TGAATTAGATGAGCGGCAG 57 1683305 1683325 AAAGAAGGGTACTTCGATGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14673 FBgn0037352 FBtr0078738 2 1 1 93 3R 1452575 1453048 TGAAATTGAGCTACACCTGTG 58 1452502 1452520 GTCTCTACGGACTCATCGG 59 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 1 2 2 80 3R 1434217 1434238 GAGCATCTGAACGATAATTCCA 58 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 CG14658 FBgn0037283 FBtr0078874 2 1 1 61 3R 655848 655866 ATAACGGCCTTCGAGATGG 59 655805 655823 CTCTCCAATAGCTTGCGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31530 FBgn0051530 FBtr0078882 3 1 1 60 3R 578909 583278 CAGCTGCTGAAATATTTCAGTC 58 578870 578888 ATATCTGCGTGATCATGCC 57 NA DesignRelaxed Drosophila melanogaster 61 Fip1 FBgn0037255 FBtr0078928 1 1 1 80 3R 312603 312680 AGAAAGATCAGCTGAGAAAGGA 59 312721 312739 TATCGTACCACCTGGTGTG 58 NA Drosophila melanogaster 61 CG14651 FBgn0037254 FBtr0299947 3 1 1 60 3R 309091 309110 TACTCACTGGCGTTTAACAC 58 309131 309151 ACGTCTTCTTAATGTCCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31525 FBgn0051525 FBtr0078924 1 1 1 60 3R 253659 253677 ATCAGAGGCGTTAGTGTCC 59 253699 253719 CCACCTTATCCATCATTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14647 FBgn0037244 FBtr0290222 3 1 1 91 3R 226853 227089 ACTTCAAGTATGCCAACATGTC 59 227140 227159 GTTTGCGTACTGAAGATCCG 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 3 2 2 82 3R 24486 24563 ATATGCTGTCGAGCTATTGGA 59 24607 24625 CAATTACTGGCGCCAAGTG 59 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 1 3 3 80 3L 22718630 22718710 GATTGCGTGTCAGTACCAC 59 22718752 22718772 AAGGTATACGCCCATCTAGTC 58 NA Drosophila melanogaster 61 CG14451 FBgn0037183 FBtr0078538 1 1 1 60 3L 22714595 22714616 AACAAGGAATATGTTGACACCC 59 22714556 22714574 CAGACTGAAAGCTTCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7148 FBgn0046301 FBtr0078448 3 1 1 113 3L 21823820 21823897 ATAGAGCGAACCTAAAGAGCT 58 21823727 21823745 CAAATTGGTATCCGCGGTC 59 NA Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078460,FBtr0078461 2 2 2 175 3L 21687560 21687578 TATTATCCTCCCGCACCAC 59 21686809 21687421 CGTATAAACATGCCTGGCG 59 NA Drosophila melanogaster 61 Sfp78E FBgn0261059 FBtr0301939 2 1 1 80 3L 21676695 21676781 GGTAAAGAAGACTAAGTATGGTTGG 59 21676639 21676660 TTTGTTACCTTACAAGATGCCG 59 NA Drosophila melanogaster 61 Sfp78E FBgn0261059 FBtr0301939 1 1 1 80 3L 21676699 21676784 GACGGTAAAGAAGACTAAGTATGG 58 21676642 21676661 GTTACCTTACAAGATGCCGT 58 NA Drosophila melanogaster 61 CG14574 FBgn0037104 FBtr0078467 2 1 1 61 3L 21574213 21574231 GTTACTCCTCGTGAGAGGA 57 21574170 21574188 TCCAGGTCGTACATGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 2 3 3 82 3L 21562983 21563064 ATCGGGTTCAGGACTTCTC 58 21563110 21563128 GATCAGGTCTTCGTCACAC 58 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089462 1 1 3 99 3L 21171018 21171036 ATAATATACGCCGCTCCGA 58 21171253 21171271 GATAAAGCCATCCAGGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 CG4074 FBgn0037017 FBtr0078280 2 1 1 119 3L 20761742 20761761 TACCCATCCATATGGTCCTG 58 20761578 20761596 CACTAACCGTGTAGTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13251 FBgn0037014 FBtr0078243 1 1 1 83 3L 20631426 20631444 TACACCATCAAGGGACGAC 59 20631491 20631750 ATAGCAGTATCCATCGGCC 59 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 2 2 2 124 3L 20432553 20432638 AAGGAACCAAACCTGAAGC 58 20432447 20432465 CTGATAGCCAAGTGGTTCG 58 NA Drosophila melanogaster 61 kin17 FBgn0024887 FBtr0078181 3 1 1 80 3L 20350900 20350922 GACGTAATTGACAGATATCAGGG 58 20350960 20351052 CTCCAAATGAGCTTGATCCAC 59 NA Drosophila melanogaster 61 CG6434 FBgn0036972 FBtr0074844 2 1 1 66 3L 20316254 20316272 CGTTCTCGTAGAGGTAGGC 59 20316144 20316224 GATGTTCAAGTCGCCATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 2 2 2 81 3L 19904554 19904574 AGATAAGCATACGCCAAACAG 58 19904616 19904689 GGTTTCAAGGGCTCATTTGG 59 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 1 2 2 116 3L 19598219 19598237 CTAGACATGATCCGCAGTG 57 19598066 19598141 TGTGTAGCACATAAGATCCTG 57 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 2 12 12 143 3L 19311991 19312011 CTTCTTCCTGTTCATGCACAC 59 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 mRpL21 FBgn0036853 FBtr0075022 1 1 1 82 3L 19248041 19248059 TATGCGTCAAATGCTACGC 59 19247901 19247919 TTACCGGCGATATGCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir75c FBgn0261401 FBtr0302292 3 1 1 85 3L 17814330 17814348 GGACTATTCAGCAGTTGGC 58 17814103 17814284 CGGAGAAGACACAAGATATGTC 58 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 2 2 2 142 3L 17548149 17548167 CAAAGACGACAGGATGGTG 58 17547969 17548044 GACTTGTGATCCGTATGAGC 58 NA Drosophila melanogaster 61 CG13733 FBgn0036729 FBtr0075225 1 1 1 60 3L 17471610 17471630 GAGAAGTACATTGCCTTCCTG 58 17471570 17471590 GTTGCTGGTACTTGTTACGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32165 FBgn0042178 FBtr0075312 2 1 1 133 3L 16590015 16590033 TGCTTACCTTTGTAGGCAG 57 16590128 16590204 GTAATCATCGTCACCTTCCTC 58 NA Drosophila melanogaster 61 CG13033 FBgn0036638 FBtr0075400 3 1 1 234 3L 16538387 16538641 CAAAGATGCAAGGATTCAAGG 57 16538173 16538191 TACTCGTTGTTCAGCGGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13059 FBgn0036607 FBtr0075371 1 1 1 108 3L 16316831 16316914 ATGTTCAAATTCGTCGCCT 58 16316986 16317004 CAGTCTTGGCAAGAATCGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13060 FBgn0036606 FBtr0075370 1 1 1 62 3L 16313030 16313110 TCAAATTTATCGGCGTCATCG 59 16313134 16313152 GAGTCTCGATGAGACCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540,FBtr0100528,FBtr0075539,FBtr0075538 2 4 4 96 3L 15816272 15816356 GTTGTTCCAACACATTCCCT 58 15816195 15816213 ATAAGTGGGCACCGATAGC 59 NA Drosophila melanogaster 61 CG34451 FBgn0085480 FBtr0112757 1 1 1 80 3L 15682350 15682452 TACCCATGAGTCCTTTGTCC 59 15682289 15682307 TTCGACGCCATCGTATACC 59 NA Drosophila melanogaster 61 pgant8 FBgn0036529 FBtr0075578 1 1 1 91 3L 15678621 15678731 ATTTCAAGGAACTACCGCC 57 15678784 15678804 GGAATCACTGTTAAATGTGGC 57 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110881,FBtr0100360,FBtr0110880 2 4 4 162 3L 15299748 15299766 GTTCTGGGTCTATGGGACC 59 15299892 15300068 CATAGCAAACTCCTGCCAG 58 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110881,FBtr0100360,FBtr0110880 1 4 4 161 3L 15299749 15299767 TTCTGGGTCTATGGGACCT 59 15299892 15300068 CATAGCAAACTCCTGCCAG 58 NA Drosophila melanogaster 61 CG13479 FBgn0040811 FBtr0075721 1 1 1 60 3L 14561055 14561074 GATCCAGACAGGACTCACAC 59 14561014 14561032 TCCTGCTGTGGGATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gl FBgn0001108 FBtr0075756 2 1 1 103 3L 13924205 13924223 GATGAAGCGCTCTGAAGTC 58 13924290 13924855 CGACTTGTTCCTGCAAGTC 59 NA Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075815 1 1 2 88 3L 13644663 13644682 TCCATTAATACCACCAGCCA 58 13595565 13631623 GATCTAAATGCTCGCTGCG 59 NA Drosophila melanogaster 61 RpS12 FBgn0260441 FBtr0075878 2 1 1 199 3L 13016618 13016844 GTTGATGTTGATGTTCCCTCC 59 13017508 13017526 TTCTTGTAGTTGGGCTCGT 59 NA Drosophila melanogaster 61 CG32107 FBgn0052107 FBtr0075937 2 1 1 60 3L 12852159 12852177 TCGTATGGCACATTGACTC 57 12852117 12852137 CCTTTAAGTTCGGCAAATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32104 FBgn0052104 FBtr0075986 3 1 1 80 3L 12390999 12391084 TTCGATTAGCCAGATCCACC 59 12390938 12390961 GGTTATAGATGCTAAAGATCCCAG 58 NA Drosophila melanogaster 61 CG10418 FBgn0036277 FBtr0075954 3 1 1 81 3L 12329936 12330017 AACGACCTCAGCATATGTG 57 12330060 12330080 GATCTGTGACACTGATATCCG 58 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999,FBtr0075998 1 2 2 80 3L 12147240 12147318 TCTTCAACTCGCCATCTGAG 59 12147358 12147379 AATAGTCCATCGGTTGATTGTG 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076086,FBtr0076087 3 4 4 82 3L 11780327 11780347 TGGAAACAATGGTCATTCCTC 58 11780197 11780283 CACTCACACGGGAGTAGTC 59 NA Drosophila melanogaster 61 CG14135 FBgn0036193 FBtr0290309 3 1 1 80 3L 11685390 11685408 ATGCCAAGGATCATGTGGA 59 11685449 11685532 TTAAGGAGCATATTTCGAGCTC 58 NA Drosophila melanogaster 61 Muc68Ca FBgn0036181 FBtr0076140 3 1 1 60 3L 11611957 11611975 CAATCCACCACCTCATCTG 57 11611915 11611933 TGTTACCGCCATTTGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7607 FBgn0036145 FBtr0076163 3 1 1 81 3L 11193358 11193377 CGAATCTCACATAGAAGCGA 57 11193421 11193508 CTCGTAGAAACCAGCATCC 58 NA Drosophila melanogaster 61 CG18628 FBgn0036091 FBtr0076256 2 1 1 205 3L 10632896 10632915 ACCATGAAGTTCCTACTCGT 58 10633146 10633164 AATGGAGATGTCTAGCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32055 FBgn0052055 FBtr0076304 2 1 1 161 3L 10212775 10212795 TGATAGCAGTCATAGAACCCA 58 10212578 10212654 GGTGACACCATTGAAAGTCTC 59 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 2 2 2 60 3L 9886555 9886626 GCGATACAAGAAATGGCGT 59 9886513 9886533 TGCCAAGTTATTTAGGACCTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 2 2 2 297 3L 9851662 9851681 GCTCATCTTACGCTACATGG 58 9851110 9851128 GTCACAATGCCAACTCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3335 FBgn0036018 FBtr0076383 3 1 1 167 3L 9617465 9617536 CCAAGCATATCACCGAAGAC 58 9617666 9617684 ATGTGTTGTCAAAGTGCCG 59 NA Drosophila melanogaster 61 CG3306 FBgn0036016 FBtr0076380 1 1 1 60 3L 9594953 9594974 TAACTTCAATGATAGTCTGCCC 58 9594992 9595013 GAAACTCATCGTGTAATGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bet3 FBgn0260859 FBtr0089879 1 1 1 159 3L 9432379 9432398 TCTCCCTGGTATTCGATAGC 58 9432141 9432257 TTCAGTTGATCCTGCACGA 59 NA Drosophila melanogaster 61 Hsp67Bc FBgn0001229 FBtr0076497 3 1 1 60 3L 9364986 9365005 CCATTGTTTCCACTTTGTCG 58 9364945 9364965 GAAACTAATGGTGGAACCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 1 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 foi FBgn0024236 FBtr0076624 1 1 1 80 3L 8524896 8524976 CTGCCTCATTCTCTTGCAG 58 8525017 8525038 AAAGAATATGATGCCACCTAGG 58 NA Drosophila melanogaster 61 mtrm FBgn0010431 FBtr0076613 1 1 1 60 3L 8406519 8406539 GGAGCGAGAAATAAAGAGCTG 59 8406560 8406579 CTCCATATTCGAGTCATCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7185 FBgn0035872 FBtr0076710 2 1 1 182 3L 8305841 8306119 CGACCAATGTTCCAAGGAG 58 8305677 8305695 AAAGAATGCTGGGTTCACG 58 NA Drosophila melanogaster 61 CG7213 FBgn0035861 FBtr0076718 1 1 1 88 3L 8232698 8232716 AAGTTGGCCTTTGTCATGG 58 8232507 8232648 TGGAACATGGTTGTAATGGTC 58 NA Drosophila melanogaster 61 mus301 FBgn0002899 FBtr0076689 1 1 1 88 3L 8131656 8131674 CAAGGGCGAATTCTATGGC 59 8131724 8131803 CGTCCTGCCATTCATAAAGAC 59 NA Drosophila melanogaster 61 CG8546 FBgn0035785 FBtr0273394 2 1 1 80 3L 7450152 7450231 GAGCGGAAGGTATTATTCCC 58 7450271 7450292 TATAACCATCCTCCACATTCCA 58 NA Drosophila melanogaster 61 CG14834 FBgn0035768 FBtr0076880 2 1 1 60 3L 7339874 7339892 GTAATGACGACCAATCCGA 57 7339832 7339851 AACGTCTTGGCATTCATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 3 5 5 99 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333862 7333988 AGTAGTCATAGTCCCTAAAGCC 58 NA Drosophila melanogaster 61 CG14829 FBgn0035751 FBtr0273403 2 1 1 86 3L 7230610 7230694 TCGTTCTACTCACACCTGG 58 7230542 7230560 CTAGGCAATCGATTCCAGC 58 NA Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 2 1 1 68 3L 6325573 6325591 TTCATGTTCGAGGGAACGA 59 6325246 6325264 GGACACGATGATCAGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Cpr65Au FBgn0042119 FBtr0077060 2 1 1 96 3L 6124695 6125056 TTCCTTTGCCTATGAGACGA 58 6124618 6124636 CTGGACAGACAAGGAACCA 59 NA Drosophila melanogaster 61 tan FBgn0028980 FBtr0077043 3 1 1 126 3L 6048753 6048824 AAAGACAACAGGTCACCCA 59 6048914 6048932 CATTGTCATCGGATTCGGG 58 NA Drosophila melanogaster 61 Pole2 FBgn0035644 FBtr0077081 3 1 1 140 3L 5889710 5889785 GTGTGCTCAAGGTTGATGG 59 5889588 5889606 GCTCCAGTTCCTGTAGTCC 59 NA Drosophila melanogaster 61 CG10592 FBgn0035619 FBtr0077129 3 1 1 84 3L 5586294 5586381 ATCAACGGCTATCCGTACC 59 5586228 5586248 ACAAGATGGTAAAGGGAAGCT 59 NA Drosophila melanogaster 61 CG13285 FBgn0035611 FBtr0077141 1 1 1 128 3L 5528360 5528546 TCGGCCAAGTTGTTAAATCTC 59 5528252 5528270 ATAGTATCCCGATGAGCCG 58 NA Drosophila melanogaster 61 Rh50 FBgn0028699 FBtr0073354 1 1 1 107 3L 4910855 4912682 ATATCCGCAGTTCCAGGAC 59 4912753 4912771 ATGAACAGGGTGAATCCGG 59 NA Drosophila melanogaster 61 CG15021 FBgn0035544 FBtr0073301 1 1 1 119 3L 4436878 4436951 ATCGAGTAGAAATGCGCTG 58 4437033 4437052 GCTGCTTGTAATGATAGCCA 58 NA InUTR Drosophila melanogaster 61 mRpS6 FBgn0035534 FBtr0073288 1 1 1 60 3L 4364705 4364725 CTTCTTACGAACTAGCACTGG 58 4364813 4364831 ATCACGGAAATCAGTTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073342 3 1 3 92 3L 4299408 4299426 CTGAGCTCTGTTAGCCAGG 59 4298761 4299352 GGTGTGGCGTGTTTAACAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 3 2 4 156 3L 4290903 4290922 GACTTTGGTCAAATCCTGCC 59 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 CG15011 FBgn0035518 FBtr0073244 3 1 1 88 3L 4256620 4256638 TGATGAAACGGGATCGGTC 59 4256490 4256571 CGCAAGGATAATTCTTCAAGCA 59 NA Drosophila melanogaster 61 CG32252 FBgn0052252 FBtr0073251 2 1 1 96 3L 4222349 4222419 AGAAGAAGTCTGCTCATGGT 58 4222272 4222290 AATACGTTTCTGGCAGGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073209,FBtr0073210 2 2 2 60 3L 4105151 4105171 TACTTCACGTTCTTCGATCTG 57 4105190 4105211 CGTACAGTTGATTGATCCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp63F FBgn0015585 FBtr0073182 2 1 1 80 3L 3816142 3816162 TGGTCCAAATCCAAGTTACCT 59 3816028 3816104 GGAATTAGTTCGATGAATCCTGG 59 NA Drosophila melanogaster 61 dro5 FBgn0035434 FBtr0073062 1 1 1 89 3L 3316847 3316865 TTCCTGTACCTCTTCCTGG 58 3316918 3316936 TCCTCCGTATCTTCCAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32277 FBgn0052277 FBtr0073103 2 1 1 60 3L 3204937 3204955 GAACCAGTGTTTGCAGGAG 59 3204895 3204913 TGATTTGATGCACTCCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spz5 FBgn0035379 FBtr0073011 3 1 1 93 3L 2886752 2886770 CACCCTTCGGAGGTAATCC 59 2886397 2886696 TACAGAAGATACGTGGGTGC 59 NA Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 2 2 2 80 3L 2244946 2244964 CGTCGAGCAATACGAATCC 58 2245008 2245085 GGCAGTATCAAGTCCATCG 58 NA Drosophila melanogaster 61 CG42355 FBgn0259701 FBtr0299954 1 1 1 98 3L 2037936 2037954 GACCTAGACGAAGACGAGG 59 2037799 2037876 GGTTTCTTTAGGTCTCACCTC 58 NA Drosophila melanogaster 61 alpha-Spec FBgn0250789 FBtr0072789 2 1 1 81 3L 1779437 1779455 AGATCGAGAATGCCTTCCG 59 1779300 1779393 TTGGTGAGGTTGCAGTAGAG 59 NA Drosophila melanogaster 61 CG18173 FBgn0035265 FBtr0072796 1 1 1 61 3L 1736900 1736972 GGGATTCGGTTTGTTGGTG 59 1736857 1736875 CATAGTCGGAGATGCCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123 2 1 5 163 3L 1664021 1664549 CATTCTCGAGAAGCAGGGA 59 1662338 1662356 CTGTGGTTCTTACTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13919 FBgn0035248 FBtr0072759 1 1 1 60 3L 1645753 1645773 TCTACAAATGGAACATTGCCG 59 1645795 1645813 AGGCAGATCATCACTTGGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9173 FBgn0035218 FBtr0072720 1 1 1 60 3L 1422117 1422137 CTCAGAAGAGGAATCCATCGT 59 1422077 1422095 ATACACTTCGGACCAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9149 FBgn0035203 FBtr0072667 2 1 1 60 3L 1303044 1303062 ATCCAGAATGTCTGACGTG 57 1303086 1303198 ATTGAAGCTACCAATGGGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 1 3 3 73 3L 1299144 1299162 CTGTCTACGGCTTCATGGA 59 1299199 1299335 GCTCTTGTAGCTGACTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 LysD FBgn0004427 FBtr0072634 2 1 1 179 3L 1211057 1211075 GTTCCTCGTGACCAATTGG 58 1210896 1210915 CAATCCGCATTCGTTGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32479 FBgn0052479 FBtr0072589 1 1 1 80 3L 874817 874837 TATTCGACGATGGTCAGATGG 59 874879 874965 CTAGCTCGTCCTCGTACTG 59 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 2 1 2 164 3L 711670 711748 AACTTACGAAAGGAAGTGGT 57 711525 711545 TGAACTGCATCGATATCTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13891 FBgn0035139 FBtr0072566 2 1 1 60 3L 433322 433340 TCGCCCAGTGAAATAAGCA 59 433280 433302 GGTTCTCTTCTCTAATAGGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 2 3 3 80 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307566 307584 TTCGCAGCTCAAATTGCTG 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 2 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mthl8 FBgn0052475 FBtr0072462 2 1 1 80 3L 25210 25231 ATATGCCCTACTGGCTTATCTC 59 25269 25350 GCCAAACTTGGTAGAATACGAC 59 NA Drosophila melanogaster 61 snoRNA:Me18S-A1597 FBgn0086029 FBtr0114305 1 1 1 60 2R 20138805 20138824 GACCCGGATTATTACACCAC 58 20138845 20138865 GCAGTTAATTCGCAATTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1820 FBgn0026169 FBtr0072259 3 1 1 60 2R 20063756 20063775 ATGATATTAAGCCGGCAGGT 59 20063796 20063816 GTTCCCAATCATAGTCACAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 3 2 3 80 2R 20766557 20766575 CATAGTGGCCCTAATAGCG 57 20766616 20766698 CGATTATGGAACCAAGTTACTC 57 NA Drosophila melanogaster 61 CG4806 FBgn0260456 FBtr0072332 3 1 1 201 2R 20554637 20554715 CTTGAATCGGTTTGTTTCCC 57 20554455 20554473 ATGCGTGTCGAAGGATAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11413 FBgn0035022 FBtr0072305 1 1 1 127 2R 20424116 20424134 GACATCATGGACACCATGG 58 20424223 20424243 CGAGTGATGAACTTGTCACAG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Brca2 FBgn0050169 FBtr0072302 1 1 1 88 2R 20414492 20414510 GAACTTGAGGGATGACCTG 57 20414562 20414640 TAGTTCCTGGACCTTCCTG 58 NA Drosophila melanogaster 61 CG13575 FBgn0034996 FBtr0072264 3 1 1 155 2R 20143120 20143138 GCACCCTCTATGTGAACAG 57 20143257 20143330 CACCAATTGTCCAGAGCTG 58 NA Drosophila melanogaster 61 CG10904 FBgn0034945 FBtr0072205 2 1 1 94 2R 19857044 19857126 CGGGCAAGAAATTGGTATCG 59 19856969 19856991 CATGGATTCCAGACTTTCTATCG 59 NA Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 1 2 2 127 2R 19767766 19767784 GTCAGCATGTGATACCCAC 58 19767875 19767969 AGAAGATTCCCAGGCTCTG 58 NA Drosophila melanogaster 61 ytr FBgn0021895 FBtr0072234 1 1 1 182 2R 19736319 19738108 GAGTCGGCGATCTAGATCG 59 19736155 19736173 GATTTACCCTCCAGGTCCG 59 NA Drosophila melanogaster 61 usnp FBgn0034913 FBtr0072236 3 1 1 115 2R 19731983 19732001 ATAACCTCGTCGCCATCAG 59 19731817 19731904 GTTTCGTAGAGCAGACCCA 59 NA Nonspecific Drosophila melanogaster 61 CG4763 FBgn0034910 FBtr0072238 2 1 1 93 2R 19711251 19711269 ATATTCGACGACCTCCGAC 59 19711080 19711194 TGGTGATTCCAACTCCCAC 59 NA Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 1 2 2 99 2R 19245611 19245629 CCAGAAGACTCTGGACCAC 59 19245692 19245771 GTCTGCAGTCTTGTTCAGG 58 NA Drosophila melanogaster 61 ord FBgn0003009 FBtr0072047 2 1 1 125 2R 19160342 19160360 CTGGAGGTCTTCAACCAGG 59 19160175 19160254 AAAGTCTTCGAGGGTCTTGG 59 NA Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0113365,FBtr0071921 2 2 2 100 2R 18591800 18591818 ACATGGAGGAAGAGACGAG 58 18591648 18591666 AGCCATATTGAGTCGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt58Fa FBgn0040091 FBtr0071934 2 1 1 124 2R 18531147 18531319 AGGGAATATGGAATCTCAATGG 57 18531044 18531062 CAAAGTGACCCTCGTTGAC 58 NA InUTR Drosophila melanogaster 61 CG30287 FBgn0050287 FBtr0071695 3 1 1 153 2R 17425111 17425181 AAGTCAATTGACAGTGCGT 58 17424976 17424997 CAGAGCTATGTCATTCTTACGA 57 NA Drosophila melanogaster 61 CG30393 FBgn0050393 FBtr0071620 1 1 1 60 2R 17154106 17154124 GGACAACGAAAGGGAACTG 58 17154064 17154083 TATAGACCTCTCACTGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9406 FBgn0034592 FBtr0071570 3 1 1 85 2R 17030213 17030231 ATTCCGTCGACTATCCAGG 58 17030280 17030350 TGGTTCCATTTGTCGATCC 57 NA Drosophila melanogaster 61 CG30291 FBgn0050291 FBtr0071549 2 1 1 81 2R 16896810 16896828 GAAGATTAGCAACGCCCTG 59 16896696 16896769 GTAGTAGTTGATATTTGTCCGGG 58 NA Drosophila melanogaster 61 insc FBgn0011674 FBtr0071562 3 1 1 91 2R 16710761 16710779 ACTCCATCATGTCCAACGA 58 16710259 16710709 GATTTGCTCGTAGAGAAAGACG 59 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 1 3 3 80 2R 16217661 16217743 GACCTGAAGGACTATATCAAGTG 58 16217781 16217801 GTACTCATAGTAGCGTTCCTG 57 NA Drosophila melanogaster 61 Obp56i FBgn0043532 FBtr0086337 3 1 1 90 2R 15755673 15755750 CATGTTTCGTACAAGCAGGT 58 15755803 15755821 TCGGTCTCATGACGATTCG 59 NA Drosophila melanogaster 61 CG15905 FBgn0034462 FBtr0086491 2 1 1 80 2R 15534921 15534941 AGATTCAACATCCACGTTAGC 58 15534773 15534879 GTTATACGTCTCCTCGGCC 59 NA Drosophila melanogaster 61 GstE5 FBgn0063495 FBtr0086673 1 1 1 60 2R 14292716 14292734 AGAAGCTGCCTTACTACGA 58 14292758 14292776 AGAATGGTCTCCAACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 3 1 1 182 2R 14049357 14049457 TCCTCATGAAGTATATTGAAGAGGG 59 14049597 14049615 ACAGGACTTTACGCTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34196 FBgn0085225 FBtr0112389 3 1 1 60 2R 13997586 13997604 CCCATGGACTATGACACCT 58 13997628 13997646 AGGCTCGAAATAAGGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 2 1 1 84 2R 13939214 13939232 TTCCAGTCTGACTGAGTGC 59 13938861 13939166 CTTGTAGCTGTCGGAGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10910 FBgn0034289 FBtr0089630 3 1 1 80 2R 13908198 13908216 GAAAGGGAGTTGGTTACGT 57 13908258 13908346 GAGATTCAGAACGGTATCCAC 58 NA Drosophila melanogaster 61 CG14491 FBgn0034284 FBtr0086803 1 1 1 60 2R 13782863 13782884 GATTTAGTAACATACCCAAGCG 57 13782900 13782923 CCACGAATATAGTAGTTCACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0301182,FBtr0301183,FBtr0299817 3 4 4 80 2R 13620072 13620148 GGGCGCAACTAACTTATGG 59 13620192 13620210 GGAACATAACACCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 CG10933 FBgn0034264 FBtr0086860 1 1 1 80 2R 13611387 13611465 GAACACGGTCTAAGTCCTG 57 13611506 13611527 CTTCACCTCTAGTTCATCATCC 58 NA Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 2 2 2 112 2R 13394242 13394960 AACAAATAGACGTCCCATCAC 58 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15917 FBgn0034199 FBtr0086986 2 1 1 60 2R 13024190 13024211 GTTTGGAAAGTACAAACAGCAC 59 13024232 13024250 TCATTAACCAGCTCCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15615 FBgn0034159 FBtr0300552 1 1 1 80 2R 12681677 12681759 AACAAATTTGGGTTCCTCACTG 59 12681618 12681637 AGATCTGCTTGTAATCGGGT 58 NA Drosophila melanogaster 61 Acp53Ea FBgn0015584 FBtr0087080 1 1 1 125 2R 12637670 12637754 TACTGGCTCTCGTATTTGTG 57 12637564 12637584 GAACAGTTGGGATTGTTTCTC 57 NA Drosophila melanogaster 61 CG8317 FBgn0034140 FBtr0087122 1 1 1 137 2R 12463780 12463798 ATGTTTGCGTACACTTGGC 59 12462688 12462706 GTTGAACTGATTGGGCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147,FBtr0087149,FBtr0087148,FBtr0087145,FBtr0087146 2 5 5 60 2R 12227858 12227878 TTTAATACCGCTACCCTGGAG 59 12227900 12227918 TCATGAAGGCCTTCTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg9 FBgn0034110 FBtr0087141 2 1 1 60 2R 12183585 12183605 CCTACTCAGCGAAATCTTCAG 58 12183625 12183645 CCTGAACACAAAGATCAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7747 FBgn0034109 FBtr0087179 1 1 1 95 2R 12180219 12180297 GCTCTCAGTTCTTTATCACCT 57 12180144 12180165 TTTGAAGAGTGTCTAATCCTCC 57 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 Ptp52F FBgn0034085 FBtr0289985 2 1 1 80 2R 12062916 12063001 CAGTGATGAAGTTAAGTGCGAG 59 12062857 12062875 CCTTGAAGATCGGTCAGGA 58 NA Drosophila melanogaster 61 CG8399 FBgn0034067 FBtr0087207 1 1 1 90 2R 11911117 11911135 GGACCCAATGACAAGAAGC 58 11911186 11911266 AGAAGATGGTAACAATTCCCAG 58 NA Drosophila melanogaster 61 CG33460 FBgn0053460 FBtr0100642 1 1 1 124 2R 11581914 11581991 AAACGCCGTTAAAGTTCGT 58 11582079 11582097 CGATGTTATTGGCTAGCGA 57 NA Drosophila melanogaster 61 CG10202 FBgn0033969 FBtr0087464 1 1 1 237 2R 10706417 10706507 AACCAAATCCGGAAGAGGG 59 10706198 10706216 ATGCAATTGGTCACTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12865 FBgn0033957 FBtr0087435 2 1 1 60 2R 10626464 10626482 GGTTGCCTTGTTATGGGAC 58 10626505 10626524 TCAGGAGACCAACTATTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sec61beta FBgn0010638 FBtr0087498 1 1 1 72 2R 10506667 10506750 TATCAAAGTTGGTCCCGTACC 59 10506784 10506802 AATGTGCAGCATGAAGACG 59 NA DesignRelaxed Drosophila melanogaster 61 Asx FBgn0000142 FBtr0100154,FBtr0087493 1 2 2 80 2R 10395747 10395765 ATATCCAGGATGTCGTCCA 57 10395809 10395900 CCTGGCCGATATCATTTCC 58 NA Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112614 2 1 3 81 2R 10214666 10215228 TCTCCGAATCGGTTTCCTC 59 10215273 10215291 ACGCTCTCGCTATGATGAC 59 NA Drosophila melanogaster 61 CG6553 FBgn0033880 FBtr0087642 3 1 1 81 2R 9742419 9742495 TTTCCTTACTGTGAAACACCC 58 9742358 9742378 ACACCAATACCACGATTAGGA 59 NA Drosophila melanogaster 61 CG6280 FBgn0033866 FBtr0087628 2 1 1 107 2R 9643065 9643140 GGCAAGGAGCTTAATAAGCAG 59 9643209 9643227 GAGTTCCCTCTCCAGATCC 58 NA Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670 2 1 2 202 2R 9395141 9395163 CCAGGATAGCTAAATCTTCACTC 58 9395381 9395399 TTCTCTGCCAATCCTTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 seq FBgn0028991 FBtr0100501 3 1 1 94 2R 9072339 9072360 TATCAAACTACGGCCAGTAGTC 59 9070724 9072284 GTTGTGACCACATTGTCGG 59 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0087816 1 1 4 108 2R 8756581 8756665 CCTTGTCAAACTGGACGAC 58 8756491 8756509 GCAGCAACTCATGATGAGG 59 NA InUTR Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0289995 3 1 2 110 2R 8736273 8736355 ATTATGGCTTGTGGCAGTG 58 8736181 8736199 ATACTGACCCTTAGCCACG 58 NA InUTR Drosophila melanogaster 61 CG8768 FBgn0033769 FBtr0087871 3 1 1 84 2R 8580019 8580096 CTCTGATAGGTGGTGGCAC 59 8579953 8579971 GAGATCACCGTCACATCGT 59 NA Drosophila melanogaster 61 CG8818 FBgn0033751 FBtr0087941 2 1 1 204 2R 8405275 8405355 CTAGTGGAGAGGAGAGCCA 59 8405037 8405058 CTAATTCACTGCAGGATTTGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG8545 FBgn0033741 FBtr0087934 3 1 1 139 2R 8356346 8356426 AATCGTTTGCTCCCATGGA 59 8356529 8356547 CGGTTGTGGTAACTTTCCC 58 NA Drosophila melanogaster 61 Cpr49Ag FBgn0033730 FBtr0087922 3 1 1 60 2R 8295492 8295513 AAGCAGGATAATGTGAACAACG 59 8295533 8295633 CGTTCGATGTCTCATAGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087999 2 1 2 138 2R 8141850 8141934 AAGCTGCTAAATACCACCG 57 8142036 8142054 GGACGCTCTTCAACTTCTC 58 NA InUTR Drosophila melanogaster 61 RpIII128 FBgn0004463 FBtr0087977 2 1 1 87 2R 7927428 7927447 CAGAATAGATTCGGTGCCTC 58 7927497 7927566 ACTTGGAGCCCATGTACTC 59 NA Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088129 1 1 2 144 2R 7255898 7256065 ATAAGTTTAGGCCTCGAAACG 58 7256170 7256189 GAAGGGCTTTAGGAAATCCA 57 NA InUTR Drosophila melanogaster 61 Cpr47Eg FBgn0086519 FBtr0088183 3 1 1 155 2R 7165820 7165907 AGTTCTTCATTGCTTTCGCC 59 7165684 7165702 CGTTAAGGTCACCCTTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 BBS4 FBgn0033578 FBtr0088202 3 1 1 81 2R 7025183 7025928 CATCGCATCTGAACAATACG 57 7025972 7025990 GTAGCACTCGGCATTATCC 58 NA Drosophila melanogaster 61 CG7712 FBgn0033570 FBtr0088238 3 1 1 83 2R 6785085 6785180 TTCCCTACATCGTCATGGAC 59 6785021 6785039 GATGCTTGACGAACTCCTC 58 NA Drosophila melanogaster 61 Prx2540-2 FBgn0033518 FBtr0088259 3 1 1 103 2R 6306821 6306904 CAACGTTGACGAGATTCTGAG 59 6307032 6307050 TCATGACCTTAGTGCCAGG 59 NA Nonspecific Drosophila melanogaster 61 mRpL42 FBgn0033480 FBtr0088403 3 1 1 61 2R 5954566 5954586 AAAGCAAACATCCAGAAGTGG 59 5954609 5954627 GTGTTTAGTCGTGTGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 2 2 2 80 2R 5786776 5786864 ACATGAAGGTGATGTGGGT 59 5786714 5786736 AACACCTATAGAGCATGTAGAGG 59 NA Drosophila melanogaster 61 sec24 FBgn0033460 FBtr0088451 2 1 1 80 2R 5764739 5764822 CTGGTGCAGATAATTAGGGAC 58 5764679 5764698 ACTAGATTCACTGCGATCGT 59 NA Drosophila melanogaster 61 CG1671 FBgn0033454 FBtr0088373 2 1 1 169 2R 5735573 5735591 CGTTCATGTTCTGATCCGC 59 5735781 5735801 TTGAGGCAGTAAAGATGATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Prosalpha7 FBgn0023175 FBtr0089998 1 1 1 122 2R 5734397 5734585 GGTGAAATCATCTACAAAGTCC 57 5734296 5734314 CTTCTCCGTCAGTTCTGAG 57 NA Drosophila melanogaster 61 Cyp6a13 FBgn0033304 FBtr0088690 3 1 1 60 2R 4458779 4458797 CCAGACATTGGACTACAGG 57 4458820 4458839 TAGTAGTTGGATCAGGTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055,FBtr0088815 2 2 2 80 2R 4027798 4027818 AATACTACACCTGGATGGCTG 59 4027645 4027758 CAATGGCATCATGGGTTAGTG 59 NA Drosophila melanogaster 61 sut2 FBgn0028562 FBtr0088778 3 1 1 83 2R 3976334 3976357 CTTCATTCTAACATTCATCCTCGG 59 3976399 3976476 GAATCCTCGAGGAGCTCTG 59 NA Drosophila melanogaster 61 CG14762 FBgn0033250 FBtr0088867 2 1 1 80 2R 3898587 3898684 TATCACCGATAACCCGCTG 59 3898525 3898544 TCGTCCTTGTTCTTCAGGTC 59 NA Drosophila melanogaster 61 Hey FBgn0027788 FBtr0088869 2 1 1 193 2R 3884916 3885347 CCAAGGAACAAATCTCGCC 59 3884741 3884759 GGTCAGCTGAAGGATTTCG 58 NA Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 2 2 2 119 2R 3850891 3850967 GAATATAGACCACGCGGTC 57 3851050 3851068 GTAGGGATCAATCGGAGGT 58 NA Drosophila melanogaster 61 CG11165 FBgn0033238 FBtr0088853 3 1 1 60 2R 3837750 3837770 CGAGTTGGAAGAAATGATACG 57 3837789 3837810 CTCGTAATTCAAGTGATTGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30377 FBgn0050377 FBtr0088844 1 1 1 107 2R 3794852 3794870 TGTACTACGGCACCAATCG 59 3794941 3801871 GCGAGGATGGATAGGACAG 59 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112580 3 3 4 80 2R 3732585 3732604 GGAAGTTCCAGTACATGCTC 58 3732463 3732542 TGAAGAGTGTGAGTCCCTC 58 NA Drosophila melanogaster 61 phr FBgn0003082 FBtr0088838 3 1 2 173 2R 3713043 3713116 TCAAGATTGTTCTTCCGCTG 58 3713251 3713270 GGTAATCCGGCTTAGAAACC 58 NA Drosophila melanogaster 61 mus205 FBgn0002891 FBtr0088831 3 1 1 83 2R 3681546 3681565 GGCCATCAACATATCCTTGG 58 3681610 3681686 TAGAAGGGTATGCCCTTGAC 58 NA Drosophila melanogaster 61 CG30491 FBgn0050491 FBtr0088919 1 1 1 86 2R 3542934 3542952 TTTGCGTTTCTCAAGAGCC 59 3542998 3543085 CATAAGATCCTTCACGAAGAAGG 59 NA Drosophila melanogaster 61 CG12736 FBgn0033184 FBtr0088981 3 1 1 85 2R 3397262 3397284 CCATATTGGGTATTCCACTACAG 58 3397133 3397223 CCGAGATCATGTTCTTTATGTAGTC 59 NA Drosophila melanogaster 61 cos FBgn0000352 FBtr0089015 2 1 1 169 2R 3273199 3273217 AACACGATGATCGTTCAGC 58 3272992 3273067 TTGGAGTCTATCAGCTTGGA 58 NA Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 1 2 2 85 2R 1962622 1962640 AAATAAGAGCGTCAACGCA 58 1962492 1962573 CATTATCGCTGTCACCCAC 58 NA Drosophila melanogaster 61 CG8245 FBgn0033031 FBtr0086036 2 1 1 96 2R 1556839 1556857 CAGCCATCTATGGTAGGGA 57 1556914 1556996 GAAATTGATTCCTCCACAAACC 58 NA Drosophila melanogaster 61 CG10396 FBgn0033020 FBtr0086089 2 1 1 151 2R 1241506 1241524 CAACTGTCGAATTTCCGGA 58 1241698 1241720 CCATAAGTCGAATACCATCTCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 1 3 3 80 2R 1213437 1213458 TAGAACTGCAACCAAATTTCCC 59 1213499 1213580 CAGCTTCTTTAACCTGCCC 58 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0081385 3 2 3 101 2L 20647746 20647765 CTTTGAGACTTCTTGGGACC 58 20648001 20648197 CTGCATTATAAGTGTGGAAACC 58 NA Drosophila melanogaster 61 CR40465 FBgn0250817 FBtr0100850 2 1 1 60 2L 20253962 20253983 CATATAGAATGGGTCCAGTCTG 57 20253923 20253941 ACCACAGGTACTCTTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 3 3 3 117 2L 22428776 22428854 GGATCCAGGTTGGATTGAC 57 22428677 22428695 GTCACTTCAGTGCATCCTG 58 NA Drosophila melanogaster 61 CG31702 FBgn0051702 FBtr0085934 1 1 1 81 2L 22072544 22072611 ATACCACGGGATTGGTTCC 59 22072653 22072674 TAGCCTTTCATTATCTCGTCCC 59 NA Nonspecific Drosophila melanogaster 61 CG34173 FBgn0085202 FBtr0112364 3 1 1 106 2L 22054098 22054172 TTCAAGATGTTTCGCACACTG 59 22054012 22054030 ATAAGGGCACAGGTGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31601 FBgn0051601 FBtr0085947 2 1 1 90 2L 22042166 22042184 CAAATTTGAACAGGCTGGG 57 22041652 22042112 TAGGTATCCTTAGCTGGCG 58 NA Drosophila melanogaster 61 dtr FBgn0023090 FBtr0081516 2 1 1 86 2L 21363432 21363507 GCGAAAGCATTAACTGTACCA 59 21363555 21363573 CCGAATCGCTAGACCTCAG 60 NA Drosophila melanogaster 61 CG8677 FBgn0026577 FBtr0081477 1 1 1 80 2L 21222546 21222564 CAAGATGCCTGGGAAATCG 59 21222605 21222686 GAGAAGTTCCCGAAATATTCGC 59 NA Drosophila melanogaster 61 CG31627 FBgn0051627 FBtr0300424 1 1 1 148 2L 21173710 21173728 GATGGAGCGCATACAAGAG 59 21173837 21173914 GCTTAAGATGCATTGGAATCTC 58 NA Drosophila melanogaster 61 CG9272 FBgn0032907 FBtr0089944 2 1 1 109 2L 20927614 20927700 GATAACGTGAGGGATATAGAGGA 58 20927527 20927545 TTTAAGAGACGCTGCTTGC 58 NA Drosophila melanogaster 61 CG9316 FBgn0032878 FBtr0081396 1 1 1 80 2L 20725803 20725878 TAATGGTTGCTATACAGGCCA 59 20725743 20725762 TTCCATAGCAGACAGTCTCG 59 NA Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0302224 3 1 2 128 2L 20451265 20451347 GTTGTGTAATAGGCAACTACTACAG 59 20451431 20451451 AAAGTGGAGTCTATGATGCGA 59 NA InUTR Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081339,FBtr0081338 2 2 2 136 2L 20096892 20096911 CTTACAAGCAAACCTACGGC 59 20096713 20096731 AATGGGACAGGGATTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Hf FBgn0014000 FBtr0081306 2 1 1 185 2L 19967507 19967589 GGGTCTTATCTGTCTGGCTC 59 19967341 19967359 AAGTACTGCCGATCGATGG 59 NA Drosophila melanogaster 61 mib2 FBgn0086442 FBtr0081142 2 1 1 99 2L 19037963 19038095 CTCAAGTTGGAGTTCGTCAC 58 19038157 19038175 TGATAGTTGGGACACTGGG 58 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 2 2 2 103 2L 18862251 18862269 TATTAGGGACAAGCGACCC 58 18862105 18862185 CATTGTAGCAGGTTCTGAGC 59 NA Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090,FBtr0081089,FBtr0081091 2 3 3 148 2L 18442842 18442860 ATGCGAAGCTCCACTACTG 59 18442712 18442732 AGACCTCTACTTCCTGTTCTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG5790 FBgn0032677 FBtr0081050 2 1 1 60 2L 18295393 18295411 ATCAACAGCTCCTTCTCCA 58 18295432 18295453 ACTAATTTCTCGTTGAGATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5783 FBgn0032670 FBtr0081049 1 1 1 80 2L 18156553 18156628 TCAAGCTGAAAGTCGAACCT 60 18156670 18156689 ACTCTGCGTTAACCAATGGA 60 NA Drosophila melanogaster 61 CG31740 FBgn0051740 FBtr0081028 1 1 1 125 2L 18009066 18009085 AACGTATTTCTTCAGCAGGA 57 18009309 18009327 CAGCAAAGCATCAGAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5681 FBgn0032658 FBtr0081024 2 1 1 115 2L 17986412 17986433 GCTCAGTCAAGATTTATAGCCT 58 17986562 17986580 TTATCTGCAGTGCTAGCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6870 FBgn0032652 FBtr0080989 1 1 1 60 2L 17591922 17591941 TTGCTGGGTGGTAATCTACG 59 17591881 17591901 GGGATGATCCCTTAGAAAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 1 1 1 122 2L 17411613 17412807 ATCAGGGAGCTGCTTTCTG 59 17412893 17412911 TCTTAGCCGAATCCTCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 her FBgn0001185 FBtr0080883 3 1 1 151 2L 16678235 16678321 GATAAGCACGTCATCGCTG 59 16678433 16678454 AACTCATCGTCTAATTCGTCCA 59 NA Drosophila melanogaster 61 CG5861 FBgn0015338 FBtr0080850 3 1 1 102 2L 16306613 16306702 TTCTTTGCGGAGATTCTTCG 58 16306530 16306548 TTATGAGCTTTGAGTGGCC 57 NA Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752,FBtr0300848 3 2 2 81 2L 15555017 15578890 TATTATTGCACAAGACCTGTGG 58 15578928 15578950 CATACTCGGACTAGAATGATTCC 58 NA InUTR Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 3 2 2 94 2L 15117483 15117563 AAGGATAGGTGCTGGTTCC 59 15117621 15117639 CAAGCATTGTTACTGGGCA 58 NA Drosophila melanogaster 61 TfIIS FBgn0010422 FBtr0080722 3 1 1 89 2L 15060444 15060462 AAGATGAGCAAGATGGCCA 59 15060307 15060327 GTCGAGATTGATGTTAAGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 2 3 3 105 2L 14357443 14357527 CCGAGAAGAAATTCATGGCC 59 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 Cyp28a5 FBgn0028940 FBtr0080587 2 1 1 94 2L 13977473 13977493 GCTATTGTGCGGAAACTATCC 59 13977545 13977711 CGTACTTGTTCTTATACTGCCTG 59 NA Drosophila melanogaster 61 Sos FBgn0001965 FBtr0080541 2 1 1 80 2L 13815706 13815787 ATTTATTCGCGAGGATTCGC 59 13815830 13815848 CCGTCGAAGAGGAATACCT 59 NA Drosophila melanogaster 61 p38b FBgn0024846 FBtr0080534 3 1 1 170 2L 13780760 13780880 GAGATCAATGTTGAGGCCG 58 13781014 13781032 CAGCTTGTAGAATTTGGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31814 FBgn0051814 FBtr0080580 3 1 1 80 2L 13684542 13687536 GATATGATCATATCGGACACCTC 58 13684484 13684504 CATGTACTTTGTGTAACCGCT 59 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220 3 2 3 96 2L 13384782 13384992 GCTTAAGTTACAGAAGACTTGC 57 13385049 13385067 ATAGGTCACCTCGAACTGG 58 NA Drosophila melanogaster 61 CG5867 FBgn0027586 FBtr0080449 2 1 1 109 2L 13238868 13238886 ATGGTCACACCTATCTGCG 59 13238959 13239039 GATGACATCGTTCAGCACC 59 NA Drosophila melanogaster 61 CG9426 FBgn0032485 FBtr0080484 3 1 1 81 2L 13217719 13217740 GAGGGTCTCATTTACATTGTCG 59 13217600 13217678 TTGTCACTGGATTGAAGCTG 58 NA Drosophila melanogaster 61 Sir2 FBgn0024291 FBtr0080434 3 1 1 91 2L 13167169 13167187 CATGAAGCCGGATATCGTC 58 13167421 13167439 TCAGTAGATCGCACACGTC 60 NA DesignNoJunction Drosophila melanogaster 61 CG5142 FBgn0032470 FBtr0301366 2 1 1 80 2L 13108618 13108904 TCGGATGATATCATGTCCGT 58 13108947 13108965 CTCCTCGTTCTGGAATGTC 57 NA Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 2 1 1 60 2L 12427508 12427526 GAACTACTCCCTGAACAGC 57 12427385 12427485 TACGTATATGGTCAGCTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 3 2 2 143 2L 12094703 12094779 CAAGGAAAGGTACCAGAAGC 58 12094885 12094903 CCGTAGTCTTGCAGTTTGC 59 NA Drosophila melanogaster 61 CG14931 FBgn0032374 FBtr0300370 2 1 1 87 2L 11788697 11788716 GAATTAGCAAGTGTCGTGCA 59 11788766 11788849 AATCAGACTCGCTCTCGTG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 2 4 4 80 2L 11139909 11139982 TCAGATGCTACCAAGACCC 58 11139847 11139866 ATAGTGACACAGTCGAAGCA 59 NA Drosophila melanogaster 61 hgo FBgn0040211 FBtr0080201 1 1 1 89 2L 11137622 11137640 TCCCATTGGTGCTAATGGT 59 11137691 11137776 ACCTGGAAGTCCTTTACATCC 59 NA Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0080159,FBtr0113035 3 2 2 60 2L 11017362 11017382 TAGAACATTCAGACGAGGGAG 59 11017404 11017422 GACTCCAGTGAATGCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0080159,FBtr0113035 2 2 2 60 2L 11017298 11017319 CAACTTGGATTCAATGGTACAG 57 11017339 11017358 AGCTGATCTTCACATTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169 3 1 4 85 2L 10968570 10968699 AGCTATAAACGACAATTGGACC 58 10968506 10968524 GATTCGCCACATCTTGCAG 59 NA Drosophila melanogaster 61 Lip2 FBgn0024740 FBtr0080123 2 1 1 91 2L 10706144 10706165 CCATCAAAGTAATGCTCATCGT 59 10705870 10706092 CCAGTCCATCGTAGTCCAC 59 NA Drosophila melanogaster 61 CG17107 FBgn0032281 FBtr0080107 3 1 1 263 2L 10682016 10682035 TTCTAATCTTCGCCCTGGTG 59 10682261 10682279 ATCCATGTCTGCCATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 1 1 1 78 2L 10653276 10653444 AATCCAGATTTGGCGTTGC 59 10653486 10653504 AGTAGTTCCAGCGGAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7384 FBgn0032262 FBtr0080135 1 1 1 98 2L 10509777 10509795 TACAGTATCCGTGGTCAGC 58 10509635 10509715 TTGATGTGTTCTGTGCTCG 58 NA Drosophila melanogaster 61 CG33303 FBgn0053303 FBtr0080052 3 1 1 74 2L 10375167 10375185 CAACAAGATCACCCTGGGA 59 10375055 10375077 TTCTCATAGTGGATGACTAGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Hand FBgn0032209 FBtr0080073 2 1 1 82 2L 10295262 10295280 CCTTGACGTGCGAATACTC 58 10295049 10295218 ACTTTCGGAGTGTTTCATGTC 58 NA Drosophila melanogaster 61 CG4901 FBgn0032194 FBtr0079947 2 1 1 81 2L 10212334 10212354 GTGTTGATATTCCTAACCGGG 59 10212397 10212480 CAGTCGTGTCAATCTTGGC 59 NA Drosophila melanogaster 61 CG34048 FBgn0054048 FBtr0100103 2 1 1 81 2L 10126044 10126066 GCCAATCTTACAGGATACTATCG 58 10125869 10126003 GTGACGCACGTACTTTCTG 59 NA Drosophila melanogaster 61 ppk16 FBgn0065108 FBtr0100832 3 1 1 90 2L 9771418 9771500 ACCAACATTCAACAATGCCA 59 9771347 9771371 CTGAAATATGTCCGTTCGATATCTG 59 NA Drosophila melanogaster 61 CG13121 FBgn0032145 FBtr0079922 3 1 1 110 2L 9770967 9770985 GGAGGAGTCCTACTATCGG 57 9770597 9770895 CAGATAGCTTTGGCATATCGA 58 NA Drosophila melanogaster 61 CG31709 FBgn0051709 FBtr0079856 2 1 1 81 2L 9579140 9579159 GGACTTACTACAGGGAACAG 57 9579017 9579099 CTAAGCTTAAATAATACCGCCC 57 NA Drosophila melanogaster 61 CG9586 FBgn0032101 FBtr0079774 2 1 1 100 2L 9165837 9165955 TCAATACTCCCAGACTGCC 58 9165755 9165776 CCGATTTGTTGGTATTCTTGGT 59 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 1 4 4 80 2L 9154695 9154714 ATGACAGGACCCATTAAACG 58 9154756 9156507 CACAAAGTATCGCTCCTTCC 58 NA Drosophila melanogaster 61 rost FBgn0011705 FBtr0079782 2 1 1 81 2L 8986654 8986672 TGTACGGAATGAGTCTGGC 59 8986522 8986611 TTGCCAAATTCATCTGTTCCC 59 NA Drosophila melanogaster 61 CG14277 FBgn0032008 FBtr0079595 2 1 1 63 2L 8242678 8242696 GATTTGCGTGTTCCTGCTC 59 8242723 8242794 TTTGTAGCCATTGCAAGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14277 FBgn0032008 FBtr0079595 1 1 1 63 2L 8242678 8242696 GATTTGCGTGTTCCTGCTC 59 8242723 8242794 TTTGTAGCCATTGCAAGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8460 FBgn0031996 FBtr0079586 2 1 1 82 2L 8197551 8197635 GGCTATGTGACTCCATGGA 59 8197680 8197699 CAAACCGGCGAGATAATGTC 60 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185,FBtr0300184,FBtr0079531 1 3 3 122 2L 7985761 7985844 CGAAACCAGTGGCATTGAC 59 7985930 7985948 TCCGACAGCGTAAGATCAG 59 NA Drosophila melanogaster 61 CG14535 FBgn0031955 FBtr0079564 3 1 1 120 2L 7847889 7847908 AGTGCACATCCTCTATCAGC 59 7847648 7847809 GCTGATCAAATTGTTGTCTTGC 59 NA Drosophila melanogaster 61 CG33296 FBgn0053296 FBtr0302519 2 1 1 80 2L 7716205 7716400 AATATCGGCTTTGTTGGTATGC 59 7716146 7716165 GAAGGAATGAACGACCAGGA 59 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 1 3 3 94 2L 7100545 7107149 CACTTCTTCGTGAAGAGCAG 59 7100470 7100488 TAGGTCGATCGTTCGATGC 59 NA Drosophila melanogaster 61 Nuf2 FBgn0031886 FBtr0079424 3 1 1 93 2L 7065478 7065499 CAAGACGTACACCTATATGGAC 58 7065346 7065365 CTTGTAGTAGGCCAGATGGT 58 NA DesignNoJunction Drosophila melanogaster 61 nop5 FBgn0026196 FBtr0079369 1 1 1 74 2L 6917351 6917369 GCCAAGTTCGAGAAGTACC 58 6917117 6917135 CACGTTCAAGGTGTTGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 2 2 2 82 2L 6862439 6862457 GGTGGCTACCTAATATCGC 57 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 CG9536 FBgn0031818 FBtr0079267 2 1 1 80 2L 6475794 6476233 TCTGACCAATAGGAACGTTCC 59 6475734 6475752 TAAGTGCCATCTAGCAGGC 59 NA Drosophila melanogaster 61 WDR79 FBgn0031782 FBtr0079210 1 1 1 116 2L 6127549 6127623 CGATATGGACGAATCGGTC 58 6127451 6127469 AACGAAAGATCGCCATTGG 58 NA Drosophila melanogaster 61 CG9154 FBgn0031777 FBtr0079213 2 1 1 80 2L 6070274 6070295 TTAGTATAGCACTGCTCTCCTG 59 6070161 6070235 CGAACTCGAATATGTGCACTG 59 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 3 2 2 100 2L 6033999 6034020 ACGGAATGGATTATATGGTGTC 58 6033865 6033939 TAGAAAGCTAGCTCCCTTGG 58 NA Drosophila melanogaster 61 Sfp26Ac FBgn0259959 FBtr0300305 3 1 1 142 2L 5884619 5884638 GAATGCCTTACCTGTGACTG 58 5884433 5884514 TCGGTGAATGGTTTCAGCT 59 NA Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079105 2 1 2 71 2L 5554255 5554273 CTATGGCACTTCTAGAGCG 57 5554352 5554373 CGATGGTCTATGAGTAAATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 1 3 3 98 2L 5307905 5308033 TTCTAACTTGCATCCGTTGTC 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 3 2 8 93 2L 5068386 5070108 AACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG31917 FBgn0031668 FBtr0079037 2 1 1 281 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010403 5010421 CTTGATGCGGTTGGATTCG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 2 6 6 104 2L 4909615 4909687 CATTCTATGGGTTTCCGCT 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 RpL27A FBgn0010410 FBtr0077452 3 1 1 94 2L 4457506 4457755 CGACTTGGTTAAATTCGGCT 59 4457431 4457452 CCTTCTTAGAGAAGTACTTGGC 58 NA Drosophila melanogaster 61 Elp3 FBgn0031604 FBtr0077439 1 1 1 84 2L 4446044 4446115 CATGCCGCTTGTTAGTTCC 60 4446163 4446181 GCAAGTGGTTCCAAGATCC 59 NA Drosophila melanogaster 61 cutlet FBgn0015376 FBtr0077541 1 1 1 81 2L 3709330 3709348 TGACAAACACGTCTGTGAC 58 3709204 3709288 TGCGTTAGTCTTTCATAATCCC 58 NA Drosophila melanogaster 61 CG3513 FBgn0031559 FBtr0077549 1 1 1 163 2L 3693144 3693162 TATATCGGCTTTGTCGCCA 59 3692938 3692956 GAGGCATCATAGGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638,FBtr0112641,FBtr0112639 1 3 3 80 2L 3363352 3363371 AGTGTTAATGCAGGCATTCC 59 3363180 3363310 GTGATCATCGACAGTTCTGG 58 NA Drosophila melanogaster 61 CG34393 FBgn0085422 FBtr0112637 3 1 1 83 2L 3192520 3192538 ATTCGCTACAGGAGACGAC 59 3192210 3192473 GGTGCCAAGCTCTAATTGC 59 NA Drosophila melanogaster 61 CG15404 FBgn0031512 FBtr0077578 2 1 1 86 2L 3174169 3174189 AACTGGGTACTTACATGTCCT 58 3174234 3174320 GGGCAATCTGAACAAATTTAGC 58 NA Drosophila melanogaster 61 CG18558 FBgn0031469 FBtr0273251 1 1 1 116 2L 2843694 2843765 ATAATCATAGCTGGGAGAGCTG 59 2843599 2843617 TTAGGTGGCCATAAGGACG 59 NA Drosophila melanogaster 61 CG3515 FBgn0031431 FBtr0077750 3 1 1 85 2L 2552318 2552507 CCTCAAAGCATGACTACACC 58 2552252 2552271 GATAGTCTTTGCATGGCCAC 59 NA Drosophila melanogaster 61 CG7289 FBgn0031379 FBtr0077815 3 1 1 68 2L 1982485 1982551 TCCAGAACAGAAGGATCCC 58 1982582 1982601 AAGTTCTGGAGGATGAAGGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG33673 FBgn0053673 FBtr0091652 1 1 1 91 2L 1946491 1947304 GAGTCGACATCAACTTACTCG 58 1946420 1946439 GTACCAGTGCTTCAGTAGGA 58 NA Drosophila melanogaster 61 c-cup FBgn0031367 FBtr0077894 2 1 1 84 2L 1832361 1832437 AATGTTTCCTGCAAAGCTGG 59 1832296 1832314 AAAGGAGACTAACGCCTGG 59 NA Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077914,FBtr0077915 1 2 2 120 2L 1614010 1614028 CTCTCCACGGGATTGAAGG 59 1613349 1613367 GACTGTCCTTCACGGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33923 FBgn0053923 FBtr0091927 2 1 1 162 2L 1341723 1341741 TTGCAGAGATTGAATGGCT 57 1341511 1341597 TGATATCGTGGTCGTAGGG 58 NA Drosophila melanogaster 61 ATbp FBgn0039946 FBtr0301978 1 1 1 60 XHet 85055 85074 GGAAGCACATACAGGATGAG 58 85096 85175 GTACGACTGTGTTCCTTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7992 FBgn0031004 FBtr0074690 2 1 1 195 X 19140420 19140779 GATGGATTTGACCACGTCG 59 19140243 19140262 TTACATTCCGGCTGTAGGAG 59 NA Drosophila melanogaster 61 CG1681 FBgn0030484 FBtr0073778 3 1 1 89 X 13302599 13302699 GATAATGCGGTGAATCTCGC 59 13302751 13302769 CATCATGAACTTGCGGGAG 59 NA Drosophila melanogaster 61 CG1545 FBgn0030259 FBtr0299600 3 1 1 80 X 10952444 10952463 TGGAGAATTTAAGCGACCCT 59 10951819 10952403 TCACAGTACGGATAAATTGGC 58 NA Drosophila melanogaster 61 CG32685 FBgn0052685 FBtr0071489 1 1 1 80 X 9968217 9968235 GCAACAATAATTCGCTGCG 58 9968083 9968173 GGTCCACTATGTAGGGCAC 59 NA Drosophila melanogaster 61 Lim1 FBgn0026411 FBtr0071279 2 1 1 88 X 8681699 8681720 TGGACGACAATAAGTTCATCTG 58 8662965 8681651 CATTAATGAATCGCTCAGCG 57 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 1 2 2 80 3R 25844463 25844481 TCAGACGCATCCTAACGAG 59 25844344 25844419 GTGATCAGAGCTTGCTCCT 59 NA Drosophila melanogaster 61 CG9989 FBgn0039593 FBtr0085307 3 1 1 81 3R 24496943 24497012 TATCGCTACGTAAACACCGT 59 24497055 24497074 CGTAGGCATTGTCAAATCCA 58 NA Drosophila melanogaster 61 ms(3)K81 FBgn0002838 FBtr0085063 1 1 1 60 3R 22702054 22702074 CCAATTCTTCCGACGATACAC 59 22702096 22702114 AAACTCAGATTCGAGCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0110793 3 1 2 110 3R 19754494 19754569 TCCGGCGAGATTATACCAC 59 19754402 19754421 CCCATTTGGATAGTCATCGC 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Fdh FBgn0011768 FBtr0082290 3 1 1 97 3R 6698045 6698063 TCCAGTCGTTCTCCATTCG 59 6697897 6697985 CATGTGATAACCTTGCCCTC 58 NA InUTR Drosophila melanogaster 61 Adgf-B FBgn0036751 FBtr0075193 3 1 1 67 3L 17742652 17742670 TGTGGTCGAGCAATATGTG 58 17742541 17742560 AGCCAACCATGAAGTTAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302786 1 1 12 89 3L 16895161 16895239 AGCAGTTGGACAAAGAAGC 58 16895478 16895496 CTGCGATAGAGGTTTGCAG 58 NA Drosophila melanogaster 61 Cpr65Ay FBgn0085300 FBtr0112466 1 1 1 80 3L 6151442 6151519 GAAGCTTCATTTCGGATTTCAC 58 6151383 6151401 ACTGTTTCCGGCTTTACTG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 CG15925 FBgn0034129 FBtr0087159 2 1 1 60 2R 12334608 12334626 AACACCATGCAGGTATCGT 59 12334649 12334668 CCATTGCGTATTCATTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 3 3 3 87 2R 11971383 11971469 CCCTTCAGTATTTGTCATCATACTG 59 11971320 11971340 ACTTATGTGTAGGCTCTTCGG 59 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087965 2 1 3 130 2R 8213490 8213587 CTGGCATTTGACTACTGCG 59 8213378 8213396 AGTTCAACTTGGAGTCCGT 58 NA InUTR Drosophila melanogaster 61 CG7791 FBgn0033038 FBtr0086057 3 1 1 80 2R 1647141 1647160 GAAGTTCATGAGTGGAGCTG 58 1647027 1647103 GTAGGAAAGTAGTTACGAAAGGAC 59 NA Drosophila melanogaster 61 CG3473 FBgn0028913 FBtr0080661 3 1 1 60 2L 14563259 14563279 ATTCGTACCGTTCTTCTTTCG 58 14563219 14563237 GTGGATCATCTGGGTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31872 FBgn0051872 FBtr0080099 1 1 1 92 2L 10642857 10642875 TCTGCAACAAGCTTATCCC 57 10642928 10643007 GGGATAGTGTCATATTGAAGCT 57 NA Drosophila melanogaster 61 CG31714 FBgn0032180 FBtr0113032 1 1 1 80 2L 10065303 10065621 GGCAGCTGACAGTATAATTGG 59 10065243 10065261 TGCAGCGGAACATAATGAG 58 NA Drosophila melanogaster 61 Sfp26Ad FBgn0261055 FBtr0301935 1 1 1 67 2L 5943219 5943243 CAAGTGGTTAGCTATTCTACAACTC 59 5943106 5943124 TTTCATCAACTTCGGCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3246 FBgn0031538 FBtr0077572 3 1 1 97 2L 3461369 3461445 AAATGAGATTCAACGGTGGC 59 3461291 3461309 TGTAAAGGGTCCATTGGCT 59 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 1 3 3 84 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831772 831790 TACATGTTCTGCTCCACGT 59 NA Drosophila melanogaster 61 Pkg21D FBgn0000442 FBtr0078042 1 1 1 88 2L 788601 790496 AGCTGAAGAGTGTTCTCCAG 59 788532 788550 CTCTGGCAAGGAGTAGAGC 59 NA Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 2 1 1 210 2L 84259 87020 GATTCACCCAATTCCAACGA 58 84068 84086 GAGTCGTCAAACCTACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 2 6 6 80 2L 14976 14996 ATTATGTGCCTTATGGACCTG 57 14858 14937 CAATTACATCGTTGGATCTTCG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 2 5 5 81 3L 9410806 9410824 ACTGCAGCAGATAACACAG 57 9408558 9410762 ATGAATTATCTCGGCCATGC 58 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 3 2 2 138 3L 10090955 10090973 GACATACGGACCACAACCA 59 10090286 10090855 GATAAAGATGAGACCAGCTGC 58 NA Drosophila melanogaster 61 zf30C FBgn0022720 FBtr0079865 1 1 1 101 2L 9761492 9761576 ACCGCTGGTATTCTCAAGAC 60 9761640 9761658 CTTGTATTGCGCCTTCACC 60 NA Drosophila melanogaster 61 CG3759 FBgn0032116 FBtr0079807 1 1 1 80 2L 9420807 9420830 GGATAACAGTACTCTTAACAGCAC 59 9420866 9423301 TATTATCATCTGCTGATTCGCC 58 NA Drosophila melanogaster 61 Or43b FBgn0026393 FBtr0088887 2 1 1 88 2R 3808681 3808699 AGTTCCTGCAGAAACTGCA 59 3808548 3808633 CTTGGCTACATTGATGTTAGTGG 59 NA Drosophila melanogaster 61 gammaTub37C FBgn0010097 FBtr0081228 2 1 1 91 2L 19185396 19185414 ACAACCATTACATACCGCG 58 19185215 19185343 GTTGTACAACTTGGAGTACGG 59 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079152 1 1 2 282 2L 5923466 5923543 AAAGTTGAGCAGCATGGAC 58 5923202 5923220 AACTCTTTGGTGCTAGCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4198 FBgn0029753 FBtr0070750 1 1 1 60 X 5208143 5208161 CTACCAGGTGTCCATAGCG 59 5208251 5208269 GTCCGTGTATTCATGCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070123,FBtr0100530,FBtr0070124,FBtr0070126,FBtr0070127,FBtr0070125,FBtr0070129 3 8 8 60 X 551397 551416 CTCATGGGATGCAGATTTCC 58 551437 551457 TGCCAATATCAGCTCAAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 2 1 2 124 3R 20483308 20483328 TATAGTTCCGCTACCGAAACC 59 20484125 20484230 TCGGCTTTATATTGCCGGT 59 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 1 1 1 99 3L 7888728 7888799 AAATCTCGGTTTGGACTGC 58 7888862 7888880 TGCAAACTATGCGATTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 2 1 1 60 2R 2837257 2837328 AGGTATTTGGTCAAGTCTATCG 57 2837347 2837367 GCCGTAAACATAGTCTTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634,FBtr0083636 1 2 2 60 3R 14425528 14425549 ATCTACGCGAGATCCTTAACTG 59 14425570 14425588 ATGGGTGTTTGGGATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 2 2 2 92 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504797 3504901 ATATCAATGGGTAGCGATGAC 57 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113256,FBtr0113255,FBtr0083959,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 2 8 8 99 3R 16623384 16623473 GCCTCGAATATTGAGGTCTC 58 16623535 16623553 GCATCATTTGCATCATGCG 58 NA Drosophila melanogaster 61 Aats-cys FBgn0027091 FBtr0087234 1 1 1 80 2R 12032151 12032172 GGAAGGATACTCTTGACTACTC 57 12032212 12032290 TCAGGAAGAACTCATTGAGG 57 NA Drosophila melanogaster 61 CG4955 FBgn0030814 FBtr0074382 3 1 1 60 X 16976650 16976670 TTACCTTCCTATTGGAGGTCC 58 16976763 16976782 AATGTTATCGTGCAGATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9673 FBgn0030775 FBtr0074362 2 1 1 101 X 16597698 16597716 AACAAACCACATCCTGACC 58 16597494 16597513 TACTGGTTAATGGTGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 U2af50 FBgn0005411 FBtr0074234 2 1 1 85 X 16251439 16251525 GACGATCAGGTTAAGGAACTG 58 16251374 16251392 TTACTCAACCCAGTAGCGG 59 NA Drosophila melanogaster 61 CG15641 FBgn0030643 FBtr0074035 2 1 1 60 X 15362096 15362114 TGTACGTCTTCAATCGCCA 59 15362137 15362156 TAGCAATTACCGTTGACGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12479 FBgn0040871 FBtr0073869 1 1 1 60 X 14045899 14045919 GTGAGAACATCAATCGATGCC 59 14045859 14045877 ATCACCAGACCACCAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15727 FBgn0030410 FBtr0073709 2 1 1 134 X 12523596 12523617 GAACGAAGGAATAAACAAACCG 58 12523419 12523438 GTACTGCTTCATGTTCCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 1 2 2 93 X 12369789 12369809 ACTATAATACGATGGCCACGA 58 12369864 12369956 GAATCGGTGCTTTGCTGTC 59 NA Drosophila melanogaster 61 Ir10a FBgn0083979 FBtr0113487 2 1 1 67 X 11204526 11204544 ATTTCACCATGCTACTGCA 57 11203600 11203618 GTAGCTTCCATTCGCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 antdh FBgn0026268 FBtr0073468 3 1 1 163 X 11062397 11062494 AGATTACGAGCGTCAGTCC 59 11062252 11062270 CTTGATGATCAGCTCGTGC 59 NA Drosophila melanogaster 61 rtv FBgn0261277 FBtr0073470 2 1 1 88 X 11047386 11047660 TTCAATCGATGGCCTTCTG 57 11047316 11047334 TTGCATTGAAGGTGAAGGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1537 FBgn0030260 FBtr0073394 1 1 1 96 X 10956484 10956717 CATTCGCCGTAACATTAACCA 59 10956408 10956426 ATAGGGCTTCTTCAGCTGC 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071410 1 1 4 80 X 9893325 9894395 ATCACCAAGGAAATCGACTC 57 9894437 9894456 GGTATTCAGAAGACCAGGAC 57 NA Drosophila melanogaster 61 Rpt4 FBgn0028685 FBtr0070929 3 1 1 88 X 6184928 6184946 AGAACGATCTAAAGGCCCT 58 6184795 6184879 GGCCTTCACAATGAATTTATCC 58 NA Drosophila melanogaster 61 CG6927 FBgn0029733 FBtr0070721 1 1 1 82 X 4801375 4801393 CTGAGAAACTCGCTCTGGA 59 4801493 4801511 ATGTCCTTCTCCGTGAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2871 FBgn0029725 FBtr0070734 1 1 1 60 X 4671148 4671168 CGAGAGCTACATCTGAAAGAC 58 4671108 4671128 CATCCAATCTCAAGTTCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4281 FBgn0025626 FBtr0070339 3 1 1 82 X 1958634 1958652 CACTGACCTTGCCTATACG 57 1958512 1958589 CTTGTAGAATCTGGCTGGAC 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100342,FBtr0089328,FBtr0100343,FBtr0301563,FBtr0089327,FBtr0100345 3 8 8 81 4 1127211 1128333 ATTGAAGCACATGATGAGAACC 59 1128374 1128393 TGTACGTTGACATACGTTGC 59 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246,FBtr0089245,FBtr0089247 2 3 3 80 4 892583 892603 AAGGAAGTTCGCTACAAAGTC 58 892458 892543 TCATTTCCAATGGTGAAGCTG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-3405c FBgn0082958 FBtr0113590 1 1 1 91 3R 24427893 24427911 AATGTTCGATGTGCTCGTG 58 24427966 24427984 GTTGATGCACGAAGAGCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-U1554 FBgn0086060 FBtr0114336 1 1 1 64 3R 22630249 22630272 GAGCCAGCGTAGATATTATATCAC 58 22630295 22630313 ATGGTTATGCCTCTGGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98P FBgn0067407 FBtr0085225 2 1 1 130 3R 23670873 23670891 GCGCTACTTTGAGTATGGC 59 23671098 23671119 GCTCAGAAATGTTCAGTTTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 wts FBgn0011739 FBtr0085720 2 1 1 80 3R 26617859 26617947 GATGGACTACATACCAGGTGG 59 26617799 26617818 TAGAATCTGGCCAGTTCCTC 58 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 3 2 2 91 3R 26317439 26317457 ATCTTCATCGATCCCTGCA 58 26317511 26317598 CATCCAGATGTTGCCAATCC 59 NA Drosophila melanogaster 61 CG5639 FBgn0039527 FBtr0085202 2 1 1 81 3R 23415901 23415987 GAGTACGGATTTAAGAATGACCAC 59 23415843 23415861 CAATGGAGCACTTGAAGCC 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 2 3 3 80 3R 22686860 22686938 TGACAAGTTCATAAGGAATGCC 59 22686801 22686822 GTTGCAAAGTTGAACTGATAGG 58 NA Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 2 2 2 80 3R 22095466 22095486 TATCAACCACATAAGGGAGGT 58 22095528 22095680 TTGGGCACTAAGTTGACTC 57 NA Drosophila melanogaster 61 CG31323 FBgn0051323 FBtr0084988 1 1 1 94 3R 22009935 22010022 GCTATTACGATGGAACTGGC 58 22010073 22010097 CGACATTCTTATAATCTCTGTGTCG 59 NA Drosophila melanogaster 61 HLHmgamma FBgn0002735 FBtr0084955 1 1 1 60 3R 21825960 21825978 ATGCCGTCAATGAGGTCTC 59 21826002 21826020 CCTAGGCTGACATTCATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11854 FBgn0039299 FBtr0084811 1 1 1 91 3R 21068289 21068307 GAGTCAGAGGACCCTACTC 57 21068362 21068442 CTTTGTTCTAGTGAGGCGT 57 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084539,FBtr0084540 3 2 2 60 3R 19880502 19880523 TTTAAATCCAAATATGGCCGGG 59 19880542 19880562 TGCAGTGGAATATAATCTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 2 2 2 80 3R 19822359 19822382 CGATTGAGTTTAGATGAGAAGGTG 59 19822420 19822499 CTGATCAAAGGCGTGAAGAC 59 NA Drosophila melanogaster 61 CG10300 FBgn0039107 FBtr0084445 1 1 1 101 3R 19538181 19538269 CTTTCAAGTTCGTGGTCCAC 59 19538333 19538351 CTGCCTGATAGCCATTGGT 59 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088,FBtr0084388 1 2 2 80 3R 19076818 19076900 TTCCCGAAATAGCTTTGCC 58 19076756 19076776 CAATGAAATCGTAGTCCACCT 58 NA Drosophila melanogaster 61 Cortactin FBgn0025865 FBtr0084039 1 1 1 95 3R 16889216 16889234 AATTTGGAGTGCAGTCCGA 59 16889048 16889160 TGGAGTAATCCTTCTGAGACTC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299772,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299771,FBtr0299767 3 8 8 105 3R 16575003 16575021 GCGTTGCTAGCCTATATGG 58 16575088 16575200 GGAACATAACCCTAAACACGG 59 NA Drosophila melanogaster 61 CG10881 FBgn0038796 FBtr0083885 1 1 1 60 3R 16234175 16234193 GGCAAGAAGGTGAAAGTGG 59 16234217 16234235 CAGCCTTCGGAACAATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TyrRII FBgn0038541 FBtr0083512 2 1 1 81 3R 13566758 13566776 ACATTTGGATCTCGCTGGA 59 13566821 13567441 GCGAGATACCTGTCCAGAC 59 NA Drosophila melanogaster 61 CG18622 FBgn0038460 FBtr0083377 3 1 1 97 3R 12809813 12810307 GAATGACTGGATCAGTGCAC 59 12809735 12809753 GACTTTCGACTCCGGAGAG 59 NA InUTR Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 3 2 2 81 3R 12264485 12264506 AATGAGAAGGAATCGCTATTGC 59 12264364 12264447 CACTATTGTTCAGATCGAGTACG 59 NA Drosophila melanogaster 61 CG31088 FBgn0051088 FBtr0083241 1 1 1 80 3R 11776522 11776543 ATGCAATGTCTACAAACTCAGC 59 11776401 11776485 TTCCTCTTGCTGATGTAGTACTC 59 NA Drosophila melanogaster 61 CG5404 FBgn0038354 FBtr0083165 2 1 1 80 3R 11532387 11532405 GAGCGTTTACCCGATATGC 58 11532446 11532664 GCACAATAATGCCCAAATACAG 58 NA Drosophila melanogaster 61 CG5399 FBgn0038353 FBtr0083164 3 1 1 70 3R 11521894 11521985 GTCACTCAGTTGGATTGCC 58 11522019 11522037 AGGAAGCCAGATATCAGGG 58 NA DesignRelaxed Drosophila melanogaster 61 140up FBgn0010340 FBtr0082909 2 1 1 80 3R 9950954 9951037 GTTTACAATCGACGAGTTTGG 58 9950894 9950915 CCAATAAGGAATCCTAGGAAGC 58 NA Drosophila melanogaster 61 Cht5 FBgn0038180 FBtr0082826 1 1 1 83 3R 9594695 9594803 AAACTGAATGTGAACGACGG 59 9594849 9594867 GTAGAAGGGAACACCCACC 59 NA Drosophila melanogaster 61 CG14372 FBgn0038156 FBtr0100458 1 1 1 80 3R 9287938 9288256 AAGCAAATCAGCTATGCTACAC 59 9288295 9288315 CACACTATAGTTCAGCGAACC 58 NA Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0082607 2 1 2 60 3R 8194941 8194959 TGTACATCGCGAGTTTCAC 58 8194272 8194291 GCAGGTAGTAGAAGTCAACC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100321,FBtr0100320 2 2 3 197 3R 7390316 7390335 TTCAAGACCTCTGCCATCAG 59 7390070 7390088 CTTAACGTTGCCGATGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10703 FBgn0037881 FBtr0082366 1 1 1 82 3R 7054259 7054278 AGGACAAGGTGACATCTCAG 59 7054128 7054214 CTTGCAACGTTCGAGTCTG 59 NA Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 2 2 2 80 3R 5998355 5998375 CTCTTCCTGATCATGTTGCTG 59 5998142 5998315 CTCGATGATCTCTGTATTGGC 58 NA Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082079 2 1 2 186 3R 5458014 5458110 GTCTTTCAGCGAAACCTATGG 59 5458258 5458276 TGGATGCTTTACCACCTCG 59 NA InUTR Drosophila melanogaster 61 Rlb1 FBgn0014022 FBtr0082062 1 1 1 141 3R 5339111 5339189 GGTGATATCCAACAAGAAGGTC 58 5339291 5339309 TGTGTTCTTGCGTAAACGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8420 FBgn0037664 FBtr0081973 3 1 1 87 3R 5076630 5076648 TTCATTAGCACGGAAACCG 58 5076699 5076950 CGACTGGATATTTGGCCTC 58 NA Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081747,FBtr0081748 1 2 2 60 3R 3636467 3636485 CAATTCGAAGGATGAGCCA 57 3636509 3636594 TACTTCAGACGAAGTGCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34127 FBgn0083963 FBtr0301072 2 1 1 82 3R 3400133 3401857 ATCCAATTAATATCCGGGACGA 59 3400072 3400090 CAAATCCACCGTTTGAGCC 59 NA Drosophila melanogaster 61 Sas-4 FBgn0011020 FBtr0081569 1 1 1 153 3R 2978967 2979036 CCAAAGTGTTACCTTCCGC 59 2979153 2979171 CTCCGACTTCTCACTTGGG 59 NA Drosophila melanogaster 61 glob3 FBgn0037385 FBtr0078640 2 1 1 82 3R 1656053 1656122 CAGGACGTATTCTATAGCTTCCT 59 1656164 1656182 GCTTTCACGTTGAGCTCAG 59 NA Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 2 2 2 96 3R 1081338 1081419 ACGGATATTCCAGGAGAAGC 59 1081261 1081279 TTTGATCGTCTGCTAGGGC 59 NA Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829,FBtr0078828,FBtr0078830 1 3 3 60 3R 1047613 1047633 TAAGACCGGACTAATTAGCGA 58 1047573 1047593 CAGAATCTCAAACTTGATGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14662 FBgn0037291 FBtr0078846 1 1 1 109 3R 808111 808363 TATGAGCAAGTGGGAGGTC 58 808020 808038 TACTTGTTCGACTCCGTGG 59 NA Drosophila melanogaster 61 CG14647 FBgn0037244 FBtr0290222 1 1 1 82 3R 227194 227327 TTTGCGCCAATATGGAAGG 58 227370 227391 AACACCCTCTAGATTAGTTCGA 58 NA Drosophila melanogaster 61 snoRNA:Or-CD11 FBgn0086082 FBtr0114358 1 1 1 60 3L 20446837 20446855 ATGTGAAGAGCATTCCACG 58 20446879 20446897 ACGGAATAGTCAAGCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 2 2 2 80 3L 24247007 24251598 GGGTTATATTGGCAGGATAACG 59 24251636 24251657 CCTATCATAGTGTTTACCTGGC 58 NA Drosophila melanogaster 61 CG40045 FBgn0058045 FBtr0111163 3 1 1 112 3L 24023859 24023879 AAACAAGAATCCAGTGGAAGG 58 24023951 24028545 AGAATCCTCCTTCGTACAGTG 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 CG9376 FBgn0036893 FBtr0074946 1 1 1 60 3L 19605958 19605977 TCCTCTACGCCTTTATCTGC 59 19606000 19606018 GTCTGCTCATAGTTGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 3 1 1 72 3L 19530151 19530169 CGTAACTCAACATGCCGTC 59 19530205 19530285 ATATCGAGGATGGGCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt FBgn0014075 FBtr0075064 3 1 1 100 3L 18866268 18866472 CAACGAATATGATACCGAGTCG 59 18866533 18866551 ATACCACCAGCCTAAGCAG 59 NA Drosophila melanogaster 61 CG13380 FBgn0036799 FBtr0100555 3 1 1 60 3L 18609543 18609845 TTGTGATCTGCATCCAAATGAG 59 18609504 18609525 CTTACAGAATGGACAATTGCGA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG42393 FBgn0259739 FBtr0300044 3 1 1 89 3L 18036130 18036148 CGCATCCTTTACTCGATGG 58 18036199 18036294 CTTTGAGTTCAGGTGGATTCC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075267,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075269,FBtr0075268 3 7 7 81 3L 16956841 16956859 GAGACCCTCATCCACATCG 59 16956901 16956980 GCAATAGACCCTTGTGAATCAC 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 3 4 4 87 3L 16784738 16784756 GGATTCGATGTGGTTGTGG 58 16784613 16784687 TCATAGTGCAGCCCATGAC 59 NA Drosophila melanogaster 61 CG13046 FBgn0036595 FBtr0289963 3 1 1 84 3L 16281334 16281416 CCCAATTTGACTTGTGTATGG 57 16281270 16281290 CTATCGAGTAATCCAGGTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33986 FBgn0053986 FBtr0100031 3 1 1 60 3L 15517947 15517967 CCATAGAGACTCCTCCATTCG 59 15517907 15517928 GTGACCATGTTATTCGGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13481 FBgn0036421 FBtr0113170 2 1 1 60 3L 14362389 14362408 CATTACCTGTTCGATTTGCC 57 14362348 14362366 AGAGACCACTCGATGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ara FBgn0015904 FBtr0300551,FBtr0075908 2 2 2 118 3L 12587515 12587533 AAGAATCGCACAGATGACG 58 12587615 12587695 TTGGTCTCATCTTTGGCCA 59 NA Drosophila melanogaster 61 CG14137 FBgn0036178 FBtr0076144 2 1 1 70 3L 11592861 11592879 GTAGATGACGTAGCGTTGC 58 11592809 11592827 GCCAGCCTTCTGTAGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784,FBtr0301967 2 5 5 82 3L 11109449 11109536 AACAATACACAGGATCTGTTCC 58 11109388 11109406 AGCTGGGCATAGCTATACG 59 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 3 2 2 126 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094424 11094444 GTAGCCAAGACTTAGTGAAGC 58 NA Drosophila melanogaster 61 CG34239 FBgn0085268 FBtr0112433 1 1 1 81 3L 11033834 11034040 GAATCCGCTGAAAGTGACG 59 11033771 11033789 GAGGTCTTCCAAGGTCAGG 59 NA Drosophila melanogaster 61 CG32061 FBgn0052061 FBtr0076285 3 1 1 60 3L 10457535 10457558 GTGACTTTAATACCCTATTGGTCG 59 10457575 10457595 ATGCCTTCTCCAAGGATACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323 1 1 5 80 3L 9424369 9424389 ACTGGAAACAGCATCTCTAGG 59 9424431 9427511 GAGCCTCATCCGAACTCTC 59 NA InUTR Drosophila melanogaster 61 PGRP-LF FBgn0035977 FBtr0076439 1 1 1 80 3L 9343085 9343103 CTTAAGCTTCCCGTCTCCA 59 9343145 9343561 GCGGTATATGCAAACATCCTC 59 NA Drosophila melanogaster 61 CG4483 FBgn0035970 FBtr0076502 1 1 1 60 3L 9229221 9229240 TCAGTGCCGTAATAAGAGGT 58 9229180 9229200 ATGTGACGCAATCCATATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 1 2 2 66 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529280 8529299 TAGAACTCCTCCCAGTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 3 2 2 103 3L 8418952 8419513 TTCGGTAACAGCACATTGG 58 8419580 8419598 ATAGTGGTCTTTAGGGCCA 57 NA Drosophila melanogaster 61 CG42591 FBgn0260968 FBtr0301743 3 1 1 60 3L 8062649 8062670 GACTTCGAAACTGGAATCTTGG 59 8062610 8062629 GTTTATCATGGGCGGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 3 3 3 88 3L 7558075 7558155 CTAGCTGCCTCGATATCGA 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 CG32376 FBgn0052376 FBtr0076827 2 1 1 60 3L 7535525 7535543 CGGATCAGAAAGTGAGGGA 58 7535483 7535507 ATTGTCCTTATAGTATCCTGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32413 FBgn0052413 FBtr0113435 3 1 1 94 3L 5896578 5896598 AAGCTCAGATCCTTATGACGA 58 5896449 5896522 TTACTGCAACAGCCATGTC 58 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 3 2 6 134 3L 5763025 5764728 ATGGACATGACAATAACGGC 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0073339,FBtr0113138 2 2 2 82 3L 4327039 4327057 CCATTAGAGGCACGATGAG 57 4325402 4326994 CAGGGAATTCTTATTGCTGC 57 NA Drosophila melanogaster 61 Ack FBgn0028484 FBtr0073211 3 1 1 137 3L 4111631 4111717 TGCTCTCAAAGAATATTTGGCC 59 4111815 4111833 ATCAATTTCAGCTCGTGCC 58 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073095,FBtr0073096 3 2 6 184 3L 3222836 3222857 AAGTGTAGAGGTATAATGCCTG 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA InUTR Drosophila melanogaster 61 CG32271 FBgn0052271 FBtr0073105 1 1 1 60 3L 3202673 3202692 CAAAGTGTCCACCATTGAGC 59 3202632 3202650 GACCTTGATCAGATCGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 1 3 3 108 3L 3168167 3168185 CATGATCTGTCCATCGTGC 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG3386 FBgn0035152 FBtr0072611 2 1 1 127 3L 681443 681461 GATTTCTCCTCACCCAGGA 58 681272 681290 TTCCGTGTTGAGATCTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33392 FBgn0053392 FBtr0086384 1 1 1 60 2R 15639326 15639344 ATACATCGGTTCTCGTCCG 59 15639284 15639302 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130 2 1 2 197 2R 20651142 20651160 TTGGTCTCACCGAACTAGC 59 20653244 20653315 CGCCAAGAAGGTTTCTGTG 59 NA Drosophila melanogaster 61 IFa FBgn0053527 FBtr0091490 2 1 1 60 2R 20465312 20465330 GACAGCAAATAGGACCACG 58 20465270 20465288 GTCGTAGGCTCGAGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192,FBtr0072191 1 2 2 60 2R 19920084 19920102 CCTTCTTCACGAAGGTCTG 57 19920042 19920062 TAGTCGTCGTACATGAACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11388 FBgn0034959 FBtr0072162 2 1 1 60 2R 19910745 19910763 CGGACGGTCATATACACCA 59 19910784 19910805 CTATGTCTTGTATGATGCTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 2 3 4 92 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958196 18958214 TCTTGGTGCTGGTGTACAG 59 NA Drosophila melanogaster 61 CG3499 FBgn0034792 FBtr0071906 1 1 1 87 2R 18772752 18772827 CAACAGCTAAATCAGATACGTGG 59 18772687 18772706 TTAGTCGGGAGGTCATTGTG 59 NA Drosophila melanogaster 61 CG4610 FBgn0034735 FBtr0071834 1 1 1 60 2R 18381381 18381403 CAGATAACATCACTATCGAGCAG 59 18381423 18381441 TTAAGCCAGCTCAGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3624 FBgn0034724 FBtr0071845 1 1 1 80 2R 18282167 18282185 ACAAGACCCTCAGTGTGAC 59 18282047 18282123 CTGAGCTGTGCAAATTGCT 59 NA Drosophila melanogaster 61 CG9344 FBgn0034564 FBtr0071520 1 1 1 132 2R 16864740 16864829 TGACTATCGAGGTGTGCTG 59 16864925 16864943 GTAGAGGACATTGTTGCCG 58 NA Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 1 1 1 79 2R 16757934 16757952 ACTGTCTGAAGATCTGCGG 59 16757995 16758077 ATGAATGACTTGGGTGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 cer FBgn0034443 FBtr0086551 1 1 1 60 2R 15284058 15284138 GGAGTACAAGTCCAAGTTCG 58 15284017 15284035 TCTACGACGCATCAGATCC 59 NA DesignRelaxed Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 3 1 1 134 2R 15137589 15137811 GAGAACTGGAGAACAAGGC 58 15137909 15137927 GATTGTCCAGCGTTACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15073 FBgn0034379 FBtr0086607 2 1 1 80 2R 14594730 14594749 TATCTGTTGGATCAGCATCG 57 14594792 14594870 TTGGTTGGGAAATCTCCTC 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086688,FBtr0086684,FBtr0086687,FBtr0086689,FBtr0086686 2 5 8 192 2R 14309050 14311642 TGGAGGACCATAATACAGCC 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 2 2 2 81 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993672 12993690 GAGATCGCATAGCTTGAGG 57 NA Drosophila melanogaster 61 gprs FBgn0024232 FBtr0087109 3 1 1 81 2R 12532746 12532830 TGATAACAATCCGAACATCGAC 59 12532871 12532890 GTTGGCCGGTATCTTATGGA 59 NA Drosophila melanogaster 61 CG8414 FBgn0034073 FBtr0087255 2 1 1 110 2R 11987135 11987211 TGTTTGGGAATAGGTGTGG 57 11987043 11987061 GCCGAGGATAAGACAATCC 57 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087338 2 1 5 101 2R 11448718 11448736 TGACAGCTAATCTGAGCGT 58 11448883 11448901 TTCGAATCCTTGAGTCGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 2 2 2 81 2R 11035857 11035926 TAGATATAGGCTGCGGCTC 58 11035970 11035989 GATTCCAAAGCCAACATGTG 58 NA Drosophila melanogaster 61 CG34442 FBgn0085471 FBtr0112746 1 1 1 80 2R 10254942 10255018 AATTAAGAAGGTCAGGGTTTCC 58 10255059 10255077 CTTCACCCAGTTGTGAAGC 59 NA Drosophila melanogaster 61 Hsc70-5 FBgn0001220 FBtr0087568 1 1 1 85 2R 10143215 10143351 TAGCATGTTCCGCAATCTG 58 10142887 10142905 TAACAGCACCTTTGACCTC 57 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 1 3 3 137 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114494 2 2 5 118 2R 9847775 9847795 TTGGGAATTGACGATTCACTG 59 9847559 9847577 CTGGAACTACCCAGTCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 3 1 1 267 2R 9725535 9725994 AATCTCCGAATTTGGCGAG 58 9726225 9726243 CATGTTGCCGTAGTCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087758 3 1 2 178 2R 9138859 9138944 AAGTCTGTTTCGAAAGGAGGA 59 9138701 9138719 GTGAAATGGACATGTGCCG 59 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 1 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114538 9114557 CCGTTGAACTCATTGTCCTC 59 NA Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0087817 3 1 2 84 2R 8736403 8736423 GGCGTTATCTACGGATTACTG 58 8736289 8736358 GTCAAAGTCGCCATAATTGC 58 NA Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0087919 1 1 2 80 2R 8283000 8283129 CATTATTTCTGGAGTCCTCACAG 59 8283168 8283187 ACCTCATAGTAAATGCCGGA 58 NA Drosophila melanogaster 61 SmD3 FBgn0023167 FBtr0087986 3 1 1 255 2R 8056593 8056611 TTATACTGCCCGACATGCT 58 8057359 8057377 GTAGGCAGTTCCTACAGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 2 2 2 102 2R 8041068 8041154 TTATCCTCTGGTTAAGCACAC 57 8041218 8041413 GTGCTCGTAGTTCGATGAG 58 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299854 2 1 4 80 2R 7182286 7182378 TTGGTCTCCATATTCGCTCTC 59 7182226 7182246 CAGTTTCTCCTGCTTCTTGAG 59 NA Drosophila melanogaster 61 Rab3 FBgn0005586 FBtr0088257 1 1 1 80 2R 6611802 6611820 GAGCGATGGGTTTCATCCT 59 6611677 6611759 TGATCTGTGTCACCCAATCC 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG12896 FBgn0033521 FBtr0088315 1 1 1 183 2R 6314730 6314812 AACGTTGACGAGATTCTGAG 58 6314503 6314521 TTACTCCAGATGGCATGGA 58 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 1 2 2 80 2R 6226464 6226546 GCTGGAGAACATGTTTAATGAC 58 6226405 6226425 GATAGAATGGTCAACTGCTGG 58 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 3 3 3 84 2R 5323911 5323932 CATTTCAAACAAATTGGCCTCG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 CG8690 FBgn0033297 FBtr0088752 3 1 1 107 2R 4360490 4360508 ACAGTTATGGAGCAAAGCG 58 4360578 4360654 ATTTCCTAGCACCCAATTGG 58 NA Drosophila melanogaster 61 CSN7 FBgn0028836 FBtr0088742 3 1 1 92 2R 4315221 4315240 TCCAATTGCATCGAAATGCA 59 4315292 4315506 ATTGATGAGATCTTGTTCCACG 58 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140,FBtr0300954 1 2 2 80 2R 4004780 4004860 GCAGGGAGCTTATTGAATGTG 59 4004720 4004738 CGTTTGGCAGATTCCAGTC 59 NA Drosophila melanogaster 61 CG11191 FBgn0033249 FBtr0088868 1 1 1 129 2R 3889249 3889439 TCCTGTCTGAAGTTCCTGC 59 3889138 3889156 CATCCAGCTCCAGATCTCG 59 NA Nonspecific Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940,FBtr0300779,FBtr0300780,FBtr0088939 1 4 5 166 2R 3565903 3566089 GTCTAAACAGAATGGAACTCCC 58 3565758 3565780 GCTCTGGTTTAATACTGTCATCG 59 NA Drosophila melanogaster 61 CG11113 FBgn0033165 FBtr0113048 3 1 1 121 2R 3289390 3289463 ACACATTGCCATTCTCTACCT 59 3289546 3289564 TGTCAATCGTGTCCGAGTC 59 NA Nonspecific Drosophila melanogaster 61 Rab2 FBgn0014009 FBtr0086124 3 1 1 137 2R 2585073 2585566 GCTTTCAGATCTATCACACGC 59 2585665 2585683 CATGTTCGAGTTCGAGTGC 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114362 3 1 5 102 2R 2391112 2391130 GAACAACTGGAGGAGAACG 58 2391191 2415537 CAGGCAGAAGTATCTATTTACCTG 58 NA InUTR Drosophila melanogaster 61 CG17486 FBgn0032997 FBtr0299924 1 1 1 60 2R 507999 508017 GATGACCGCATTATTGCAG 57 508040 508059 AGTTCTCTTCGATGAATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR9337 FBgn0032898 FBtr0081448 2 1 1 83 2L 20863077 20863219 GAAATCCTGACGAAGTCGG 58 20863012 20863033 TCCTAGGTATGTAGATGACTGG 58 NA Drosophila melanogaster 61 His2B:CG33890 FBgn0053890 FBtr0091894 1 1 1 60 2L 21482984 21483003 AGAAGAACATCACCAAGACC 57 21482943 21482961 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31988 FBgn0051988 FBtr0081490 2 1 1 92 2L 21202486 21202510 GAGAAGAGTACGATAACGAATTCAG 59 21202257 21202437 GCTTCTCGATTGGTAATGGG 58 NA InUTR Drosophila melanogaster 61 CG31683 FBgn0051683 FBtr0081365 3 1 1 81 2L 20448395 20448413 CTTCGATCCACCGAATGTG 58 20448267 20448353 CGATTTCTTGTACTGCAGTCTC 59 NA Nonspecific Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 2 2 2 80 2L 20074239 20074260 AGAAACTGTGATTATGAAGCGC 59 20074118 20074198 GTGGTGCTTGGTGTATTGG 59 NA Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 1 2 2 80 2L 19762535 19762558 CATCCTATACCACATGTCTAATGG 58 19762296 19762497 TGTATTTGCCCTGTTTCTCC 58 NA Drosophila melanogaster 61 CG13079 FBgn0032808 FBtr0081255 1 1 1 81 2L 19558126 19558147 CCTATAGAACCCATAAGGTGGA 58 19558184 19559107 GTGTCCTCTTTAATCTTAGTAGCG 59 NA Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 1 2 2 80 2L 19417485 19417504 TTACATTGCTGGTCATAGCA 57 19417546 19417634 CACCAAACGTATTTCCTTCG 57 NA Nonspecific Drosophila melanogaster 61 CG15170 FBgn0032733 FBtr0081184 2 1 1 96 2L 18990017 18990035 GGAATGTTCCCAGACCCTC 59 18989758 18989959 TGTAATGGAGTCCACAATGGA 59 NA Drosophila melanogaster 61 CG10641 FBgn0032731 FBtr0081185 1 1 1 85 2L 18986728 18986746 AGTGGTCAACGTCTACACC 59 18978759 18986683 CCGTATCGTATGTATTGAAGGTC 59 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 1 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 nimB2 FBgn0028543 FBtr0080618 2 1 1 92 2L 13966008 13966521 GCTACAAGGAAGTTCCAACC 58 13965935 13965953 CTTGGATGCGACTCATGTC 58 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575,FBtr0080574 3 2 2 60 2L 13783342 13783362 AATTACGTGCTTAACCTACCG 58 13783302 13783320 CATCGATGTCTCGCTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Elf FBgn0020443 FBtr0080369 2 1 1 80 2L 12437930 12437948 AGGTGGTTAAGGTGGAGGA 59 12437991 12438083 ATTTGCCAGCATCAACATGG 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 1 3 4 80 2L 12407461 12407565 CACTTCCACCATTAAGGTTGTC 59 12407402 12407423 TTAAAGACGCTGTTGCTATCAC 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 3 2 5 172 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278898 11278919 GGCTGTGACTTGAATACTTGAG 59 NA Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 2 2 2 88 2L 10152773 10152791 GCCTCATCTATGTCCGTCC 59 10152843 10152967 TATGAGATTGCGTGTGCCT 59 NA Drosophila melanogaster 61 IP3K1 FBgn0032147 FBtr0079869 3 1 1 113 2L 9783054 9786694 CAATAACGAGCGGATACCC 58 9786771 9786789 TTGAGCAGGGACATCTGAG 59 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 2 3 3 81 2L 8564224 8564243 CTTACAGTCCTCGTGATTGG 58 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 CG8349 FBgn0032003 FBtr0079594 2 1 1 252 2L 8216330 8216407 GTTCTGTGCTGTTGGTGAG 59 8216623 8216641 GTGATAGGCTACCACAGCA 59 NA DesignRelaxed Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 3 4 4 112 2L 5984932 5985036 TACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079131 3 1 2 86 2L 5445157 5445175 AAAGCCATAAACCGCACAC 59 5439271 5445109 CAACAACTGTCGTGTAGTCTC 59 NA Drosophila melanogaster 61 CG14036 FBgn0031677 FBtr0079029 2 1 1 60 2L 5054761 5054781 GAGTGTGACTACTATCTCCGC 59 5054721 5054739 GACTACGAAGCGCTATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 2 1 1 88 2L 4827096 4827186 ATGGGCTATGGAATCCGTC 59 4827238 4827256 TTACCAGGACGTATCACCA 57 NA DesignNoJunction Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 2 2 2 80 2L 3463757 3463776 CCGCTAAATAATTTGCAGCA 57 3463644 3463716 GATATTGAAGCCCTGGTACTC 58 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608,FBtr0077609 3 2 2 81 2L 3276462 3276541 TGATAACGGGCATGATCCTC 59 3276400 3276419 TTGTCCAGATCCATCGAGTG 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 3 4 4 81 2L 2495422 2495442 CTGATAACGCTGGAGTTTCAG 59 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 CG15356 FBgn0031377 FBtr0077869 1 1 1 109 2L 1976800 1976917 CAATAGCATAATTGAGCTGCAC 58 1976712 1976730 TCTCTGGCGATATGTTGCT 58 NA Drosophila melanogaster 61 CG15880 FBgn0031283 FBtr0078040 1 1 1 88 2L 817175 817254 CTTTCCCTTGGCCTACTCC 59 817105 817123 AGTCAAAGTAGACCGTGCA 59 NA Drosophila melanogaster 61 CG4133 FBgn0031257 FBtr0078061 2 1 1 80 2L 456715 456805 GAGCTTAATACCTAGAACTTCCAC 58 456841 456862 GGCTTGTCTTGAAGTAATTGAC 58 NA Drosophila melanogaster 61 CG4213 FBgn0031251 FBtr0078093 3 1 1 81 2L 400449 400535 TGCAGTTAACATGCTCTTCAG 59 400388 400406 CATTCGATTGACGCGATCG 59 NA Drosophila melanogaster 61 Hop FBgn0024352 FBtr0078131 2 1 1 81 2L 296741 296760 CAGATCTTAAAGGATCCGGC 58 296803 296987 TCTGCAAGTGTTCTTTGACC 58 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078136 1 1 3 86 2L 284958 285440 TGGATGCGATAATTCAGGC 58 284890 284908 GAGGTTTCTTGGGTGTCAG 58 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078135 2 1 3 86 2L 284957 286314 TTTGTGCGATAATTCAGGCA 58 284890 284908 GAGGTTTCTTGGGTGTCAG 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 2 3 10 95 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111110 112702 CAAACATGATACCCTGGTCAC 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 1 3 10 93 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111109 112700 AACATGATACCCTGGTCACC 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 1 2 4 124 2L 128931 130515 AATAATCTACTGGGCACAGC 57 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078119 2 1 2 84 2L 156543 156745 AGGCAAATCTACATCTGGCA 59 156792 156810 GAGCTTCCATAACAGCACC 58 NA Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 2 2 2 83 2L 253880 253963 AGAGATTGTGAGCACACTG 57 253815 253833 ATGGTCTTCTCAAGGTCCT 57 NA Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 1 2 2 287 2L 542544 542564 ACTTATACCTTTAGCGAGCAC 58 542227 542245 TGTAATAGCAATGCCGGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 3 5 6 197 2L 1726645 1727655 AAAGTACTTGTGACAGCAACG 59 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA InUTR Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 1 4 4 223 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882297 2882315 ATTATCCGCGAAGGAGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 2 2 3 146 2L 2994936 2994954 CTGACGCTGTTCATGAACG 59 2995063 2995447 GTCGATGTTCGTCTGAAGGA 59 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 1 2 3 89 2L 3292518 3292536 TGAATCGCTCATCACTCAG 57 3292289 3292465 TCTATCAAGGCTGTCTCCT 57 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638 2 1 3 163 2L 3372915 3372933 GGACTAGGATCCTCATCGC 59 3368186 3372789 TCTTTAATCATGAGCGTCGC 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 1 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 2 4 11 180 2L 3626210 3634252 TTATGTCATGGAAGATGGACG 58 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 2 1 1 223 2L 4227729 4227747 TTTGGTTGCACGTTTCCTC 59 4228194 4228214 CCTTCTGAATGTTGTAGTCGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 3 2 2 81 2L 4399593 4399671 GAGAACAAGGTTAACGCGC 59 4399714 4399734 CTTAGAAGGGCGAATTCATGC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 5 5 85 2L 4469758 4469844 CAACAACAGGTGGAACACG 59 4469691 4469709 ATGGAGTGCGAGATGTGTC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 4 5 112 2L 4473964 4474340 TAGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 2 2 2 81 2L 4651674 4651768 CCAAGCAGAACTGCTTCTG 59 4651812 4651831 CAAGGATACTTGTTGGAGCG 59 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 2 4 4 84 2L 4845308 4845326 AAACCGACCAAGATTCCTG 57 4845147 4845260 TGATGCCCATTACTTTGCC 58 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 2 4 4 63 2L 4904916 4904940 CCTCCATCTTATCCATAGTTTACTC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 2 6 6 103 2L 4909614 4909686 ATTCTATGGGTTTCCGCTG 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 2 1 1 70 2L 4977640 4977664 GAGAAGTGCTATGATAACTACTTCC 59 4977754 4977772 CTCAGCAAAGCCTTGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 1 2 2 80 2L 5039728 5039817 CGGATTGGATCAGATTGATGAG 59 5039857 5039876 GTGCACTTTAGGGTCATCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0079033 1 1 6 173 2L 5043945 5043966 TGGATTACCTTATTGCAATCCC 58 5042882 5043811 CGCCTGCTTTCATTAGTCG 59 NA InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 3 6 6 62 2L 5041693 5041712 AGCCTGGATATTAAGGTCCT 57 5041501 5041519 TCTTCAAATCGATCAGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0300471 1 1 5 80 2L 5185896 5185915 ACAACTAGCAACACAACGAC 59 5185956 5187618 CGTAATTAGATCCTTCTGGCG 58 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118 2 1 3 91 2L 5580898 5580973 ACAAGAAGGAAAGAAGAGCAC 58 5580827 5580848 GTCATGCAGAATAGTTCATGGT 58 NA InUTR Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 1 4 4 91 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719354 5719372 CATACCGAATGGCATCCAG 58 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 1 4 4 110 2L 5984934 5985037 CATTCATAGAATTGGTCGCGG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327 1 1 4 86 2L 6680045 6680063 AATGATACCGGGAACGGTC 59 6678216 6679995 AATCTCCATGCGACTCAGG 59 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079428 1 1 3 126 2L 7032261 7032279 TAAGCTGATCCAACGAACC 57 7032086 7032104 AGGAACTTGTAGTCCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 1 4 4 80 2L 7403301 7403319 CTGAGAAACAAGTGGCACC 59 7403357 7403561 GACTTTCAGAAATTAGATACCCAGG 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 2 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688027 7688046 CTTAACAACAGCTTTGAGCA 57 NA Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 3 2 2 122 2L 7823093 7823467 GAGGATAGGTTTATTATCGAGGAG 58 7823548 7823566 GTTCTTCACCAGCACATCC 58 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 1 2 9 91 2L 8226594 8227677 CTTTATTGAAGACGGCAAACC 58 8226523 8226541 AATCCAGGGTGAAGTTGGT 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 3 8 9 94 2L 8222292 8222310 GATTACCTGGCACTGATGG 58 8222105 8222234 TCTTCGATGCGTATATCGG 57 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079655 1 1 6 88 2L 8384888 8386227 TTCAACAGATTCCCGAGGG 59 8386279 8386297 CTCGTAGTCAGAGGCATCG 59 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 2 3 3 71 2L 8450794 8450812 GAGACTATCGAAATGCGCT 57 8450676 8450694 CCATTGTTATGCCCACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700 1 1 3 136 2L 8493073 8493745 TACCAATCCAATGGAGGATACG 59 8492794 8492978 CGTTTGGAATTCTCCAGATCG 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0100236,FBtr0079916,FBtr0079914 1 4 6 99 2L 9825640 9825658 CCTGGAGGTTAAGTTCGGA 58 9815904 9819296 GTTCCACTCCAACGAAAGC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 3 1 1 150 2L 10426577 10426598 CCACTCGATTTATTCTTCATGC 58 10426079 10426097 CCCGATAATTCAGGTGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100488 1 1 10 91 2L 10817138 10822979 GAGTTTACAGAGACGGTGG 57 10817065 10817083 ATGTTCATCTCCACCACAG 57 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 3 3 3 81 2L 10848458 10848553 CTCAGTCTGGAAACAAGAACG 59 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 1 3 3 80 2L 10848458 10848552 TCAGTCTGGAAACAAGAACG 58 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169 3 1 4 86 2L 10969010 10969028 TGCACCCTATAACCACCTG 59 10968877 10968965 GGACTGTTGATATAGTGTTGAAGC 59 NA Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 2 1 1 169 2L 11016283 11016301 GAGCAGTCAGGAGAACCAG 59 11016500 11016518 TTCTTCCAAAGTCCCTCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 2 4 4 101 2L 11258906 11258990 GAATACATTCGGCATGGGC 59 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 2 1 1 103 2L 11936839 11936863 CAGAGGAAACAATATACTTAACCGG 59 11937105 11937123 AATATTCATGGTGCTGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 3 2 2 94 2L 13014016 13014034 ATCGAGGATAAAGCGACTG 57 13013875 13013961 GGTTGGTAACATAGATTTCGTG 57 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 1 5 5 80 2L 13634172 13634251 ACCTACAGAGATTTCACTGGC 59 13634293 13634311 CTCGCAAATTCCACCAGAG 58 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302731 3 1 5 86 2L 14287773 14287791 CAACGGACACTCAAACTCC 58 14287841 14288161 CAACGCTCACAACGATCTC 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 3 5 5 80 2L 14321173 14321191 ATAGGAAGAGCAGCTCCCT 59 14321234 14321317 TCGACAGTTCTGACAGACTC 59 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496 1 2 4 102 2L 14601207 14601225 TATCGAGATCTCGATGGGC 58 14600867 14601141 CCTTCAGACCTTGGTAGCT 58 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 2 2 4 97 2L 14639762 14688476 AATGCAATAGGCGAACCTC 58 14636100 14636118 GCTAAAGTCCCAATCTGGC 58 NA Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 2 2 2 287 2L 14743256 14743275 TTAGAACGCTTTCGACAGTG 58 14743599 14743617 TAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 3 5 5 160 2L 14977341 14977359 ATGAAGGCTTTGACAGGTG 58 14977068 14977218 ATAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 1 2 2 93 2L 15117483 15117563 AAGGATAGGTGCTGGTTCC 59 15117620 15117638 AAGCATTGTTACTGGGCAC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159 2 1 4 165 2L 15269194 15269381 CATTCAATGCCTCCATGGA 57 15269047 15269067 TAATACAGTCTATTGCCGTGC 58 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 1 2 3 197 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511263 16511281 CATGATAGCTCATCGGCAG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 3 4 16 104 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778468 16778486 CATATCGGGATCCAATGCG 58 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 2 1 1 73 2L 17012696 17012714 TATGTTGCCGTGGAAAGGA 59 17012580 17012600 TCGGTAGAACTATGTAGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090 2 1 3 130 2L 18443065 18443162 GATAAATAAGCAGCCGCCA 58 18442953 18442971 TTGATTGCCTTGTCCTTGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42305 FBgn0259201 FBtr0299687,FBtr0299686 2 2 2 60 2L 18813310 18813328 CCTGTCTTCCAAGAAAGGC 58 18813351 18813370 GGAGAATTCCAGACAATTGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 2 4 4 104 2L 18827250 18827520 TAGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 1 2 2 84 2L 18837176 18837194 TAAAGGCGGGAGTTCTTGG 59 18837040 18837129 CAATAGTTGCGAACCACCTG 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232 2 1 4 157 2L 19183446 19183524 AAATAGGCCAAATCTGCCCT 59 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA InUTR Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 2 2 3 120 2L 19385701 19386090 GGAGATTTCCAACAAAGTTTGG 58 19385296 19385314 TATAACCTCCACCGTAGCC 58 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 3 2 2 82 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488502 ATAGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 3 3 3 89 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733055 19733168 GTCTAACGAGCATATCTTGCA 58 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 3 2 3 82 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779317 19779404 CACCGTTGTTGGTATGCAC 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 2 5 5 83 2L 20355739 20355816 GACGCAAATACTCAGTCAGG 58 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 2 3 3 102 2L 20687063 20687265 CTAACCCTGATCACAGAACG 58 20686980 20686998 CATTGTAGGTGACGTGGTC 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 3 4 9 140 2L 20876967 20876986 TCAAGTGATAATCTGCCCAC 57 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081492 2 1 5 88 2L 21188916 21193342 TGTCTTCTACTTCGCCGTC 59 21188846 21188866 AGAATATGCTCTCCGATTCCT 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 2 2 3 82 2L 21318352 21318370 TCGATGCTTACAAACAGGC 58 21318415 21318499 AGGAGTATAGCATTGCACCT 58 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 2 2 5 119 2L 21670616 21670637 TGAACTTACACCCGTTAAACAG 59 21670465 21670537 ACTATTAACGATCGCACCGT 59 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 3 3 3 80 2L 21680174 21680769 AGCTAATGAACCGATTGTGG 58 21680113 21680131 TGTTGTCAGCCTCTTTCTG 57 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085957 1 1 3 103 2L 22325839 22363440 TTCTATAGATGCTGGCCGT 58 22363506 22363525 GGCGATAATGTCGATAGCTG 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 1 2 6 193 2L 22737572 22741956 ATACGAGATTGAGACGGCA 58 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 1 3 5 94 2R 614722 614741 TTCAACGTACCAAACGAACC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 1 3 5 94 2R 614722 614741 TTCAACGTACCAAACGAACC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 1 1 1 61 2R 674645 674663 GGAGGAGATCGAAACCCAC 59 674540 674562 CTGAATAGTCTACCGTCAATGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 3 1 1 66 2R 674645 674663 GGAGGAGATCGAAACCCAC 59 674535 674553 TCGCGCTGAATAGTCTACC 59 NA DesignNoJunction Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 2 5 5 71 2R 1491749 1491768 ATCAAGTTCGCTCCCTAGAG 59 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 1 4 4 69 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515399 2515417 TTAGCAGTGCCATAAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 2 2 11 109 2R 2764805 2764824 AAATGCTACAAAGTCCGGAG 58 2764021 2764733 CATAAACATACCCGTGGCG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 1 3 6 85 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 1 2 59 80 2R 3249269 3249287 AACCAAACATCGTCTGACC 58 3238787 3249225 TTAAATCCCACAGGCTCTG 57 NA Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 2 2 2 80 2R 3279534 3279654 GGATACGGAGCTCAATGTG 58 3279472 3279490 GCAATGTTAACCTGCAAGC 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 1 5 5 80 2R 3371064 3371167 GGACTTTATGTGGGATATCGAG 58 3371005 3371023 CAAGTGCGATCTTTCTCGT 58 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088884 2 1 2 88 2R 3819568 3819591 CAGTATCGAAGTGAATAAGAACCC 59 3819342 3819522 GAATGTCTGGCAGATCATCC 58 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 2 2 4 122 2R 3873199 3873218 TTGACATTGATCTTTGGCCG 59 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140 3 1 2 103 2R 4004604 4004682 CATCGATGAGCGCAAATCC 59 4004519 4004538 AACTGGACTGTATGGAGTCG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 1 4 9 148 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 3 4 4 120 2R 4642429 4644854 CGAACCAAAGACTATCGATATCTC 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 3 3 12 159 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007269 AAACATTACCACCGGATTGC 59 NA Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 1 3 3 80 2R 5651159 5651179 AGCGTCATTAACGTGATTGTG 59 5651220 5651302 CGAGTGCTCATCAATCATGG 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 3 4 4 80 2R 6096141 6096224 GTCAGGACGATCAGATATTACTG 58 6096083 6096102 AGAGATCAAGCAGTCTGGAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 1 16 17 80 2R 6192538 6192559 GATTGATGCCAACTGGTATGAG 59 6192597 6192987 CGACTGACAATCTCAACATAGC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 2 10 17 181 2R 6183480 6183498 TACAAGAGTCTCCAGGCAG 58 6188085 6192138 ATGTTCACGTCTGATCCGT 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 1 10 17 80 2R 6182434 6182453 CAGGTCATTCGTCTGTTTCC 59 6182814 6183256 GTTCTAGATTCCCGTTAAAGATGTC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 2 10 17 82 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182824 6183261 CGATTGTTCTAGATTCCCGT 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 2 3 17 104 2R 6180370 6180857 GATCAGAACATTCGAACGCT 58 6180924 6180942 ACTTCATTGGGCCTGTAGG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0113065 3 1 2 86 2R 6792305 6792325 TTTGGAATCATCGGCTATTGG 58 6792368 6792560 CAGAGGATAAATTTCATCCTGTGG 59 NA Drosophila melanogaster 61 CG8234 FBgn0033644 FBtr0088076,FBtr0088075 2 2 2 90 2R 7564735 7564753 TCTTTCCACGATCATCGTG 57 7564806 7564881 CAGAAGAATCTTTCTGCCCA 57 NA Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 2 2 2 94 2R 8156863 8156881 AGAAACTCACAGACGAGGA 58 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 2 2 2 88 2R 8529479 8529554 ATTTCGCCAAGCAATTTGTG 58 8529410 8529431 GAAGGATGTCGCAATAAATACG 58 NA Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 3 2 2 81 2R 8588060 8588139 GATGTATGAACTAAGTCTACTCCC 58 8588179 8588197 ACTCAGCTCGTAGATCTCC 58 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 1 3 3 67 2R 8810274 8810292 ATGCTCTGCAAACGTTCTG 59 8810391 8810409 ATACTTGAACCAACGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 2 2 2 91 2R 8811822 8811840 CATGCAAGACCATCTGGAG 58 8811965 8811983 CCCGAAATAGACGTTGACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 2 3 3 101 2R 8822744 8822763 AATAGACAGTATCCGGGTGC 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 2 2 2 80 2R 9094842 9094916 GGCCGAAGATCGTAATACC 57 9094960 9094978 TTTAGCGCTTCAATTTCGG 57 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 1 4 6 94 2R 9150456 9150474 GAAGTCGATTGTGATGCGG 59 9151027 9151045 TTATCGGATGCCAACAACG 58 NA DesignNoJunction Drosophila melanogaster 61 IM10 FBgn0033835 FBtr0087655 2 1 2 60 2R 9295398 9295419 ATAGGAATGGTCATACCATCGT 58 9295440 9295458 AGATTGCTTACGTGCTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0301395 3 2 6 114 2R 9332019 9332038 AGAATCCCTAACAGCCTGTG 59 9331839 9331942 TATGGCCTCGTTGGATGAC 59 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 1 3 3 137 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854368 9854386 GTTTGAAGCTCACCTTGCC 59 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 2 2 2 80 2R 10057018 10057085 CTTCTACATGATAAAGGCCCA 57 10057127 10057145 ATCGAAGTATGCTTGTGCT 57 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 2 3 8 102 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065442 10065460 CTTTAGGTTGGGTGCTTCG 58 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087501 1 1 2 100 2R 10499356 10499374 AAGTGTCACGGATGATCCC 59 10499185 10499292 GTTTGGCAGCTTCATCTGG 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 2 5 5 80 2R 10790221 10790300 CCGACAGTAATGGCAACAC 59 10790159 10790181 TAGAATCCAGCAGTATGGATACC 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 2 4 6 80 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152254 11152334 TACACCAATCTCGAATCCCT 58 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 2 5 5 80 2R 11211582 11211605 GATAATTAACGATAGGGAGATGCG 59 11211644 11211716 GGTTTCATTGCATCAGGCA 59 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112590 2 1 4 154 2R 11304328 11306865 CTTCCAAAGGTTCTTCGGT 57 11306983 11307001 ACTGCTGTGACTGTAATCC 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009 2 1 2 113 2R 12310243 12310526 GTAAACGGGAGAAGGTGGA 59 12310602 12310621 CGTAATCCTTGGGATTGTGG 58 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009,FBtr0100001 3 2 2 80 2R 12313406 12313426 CGATCATGAATTTGGCAATCC 58 12313468 12314011 TCGATCCGTATCTTGTCCA 57 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 2 3 3 80 2R 12541203 12541223 CACATTGATTACGACGTACAG 57 12541077 12541164 TAAGCCCGAATAGAACTTATCG 57 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 3 3 5 154 2R 12566511 12566529 ATCCCGAGCTCTTCATTCC 59 12562745 12565928 CATCCAGTACTGATTTCCTCCT 59 NA Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 2 2 2 89 2R 12909215 12909234 AGGATGTACATCGAGCAGAG 59 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 2 3 3 80 2R 12925279 12925354 AATCTTCACGCGCTTATTGAG 59 12925395 12925414 GGAAAGAGCAGAACACAACG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 1 7 9 87 2R 12959347 12959484 AATCTGAAGACCAAGAGATCCC 59 12959281 12959299 TGGGTGTTGTCATCTCACC 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 1 7 9 80 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958998 12959240 TTGAGCTTGAGTGTTATCACTG 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 3 7 9 81 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958997 12959240 CTTGAGCTTGAGTGTTATCACTG 59 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 3 2 2 82 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993672 12993691 AGAGATCGCATAGCTTGAGG 59 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982 2 1 2 85 2R 12996709 12996727 CCACTCTACCGAAATCCCA 58 12996776 12997460 CAATGAGATGCCGCTATCG 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 2 4 4 80 2R 13311458 13311541 CTTCGTCATAGGAATCTGCG 58 13311584 13311602 GGAACGTCTAGGCTTTCGA 59 NA Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 1 2 2 80 2R 13320625 13320706 AATCCGAAGAGATCTAGAACCA 58 13320566 13320585 ATTGGACGATGTAGACTCCT 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 2 5 5 182 2R 13400213 13400291 ACTTCTTGAGCCAATCTGG 57 13400436 13400455 GACTAAGGAACTCAGAGTGG 57 NA Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 3 3 3 136 2R 13593966 13593984 CTCAAGACTGATCCCATCG 57 13592685 13593866 TCGTTCAAATTCTGCTCGA 57 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 2 2 4 60 2R 13619768 13619859 GACGAACTATTGGACTATATCCG 58 13619878 13619897 TCACGAACAGTGTTATGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 2 2 4 129 2R 13755954 13755974 ATCTTCAAGATGTTGCCATCG 59 13755585 13755802 TGCACTTATCTCCCACTTCG 59 NA Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 1 1 1 83 2R 14049316 14049334 AAAGCAGATTGTGCTGCTG 59 14049457 14049475 AGATCCTCCGATCGTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 2 2 2 67 2R 14055634 14055721 AGCGTTTCAAATCCTTCGT 58 14055752 14055770 CTTCTTCACTCCCTCCAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923 2 3 4 159 2R 14520828 14520847 AGTACGTACAGTCAACACCA 58 14520624 14520708 CATAACCTGTCTGCATTTGGT 59 NA Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 1 3 3 80 2R 14546264 14546282 TTAGCTTGGTGTCCAACAG 57 14546143 14546220 TCGGAATGAGTTTGCAGTC 58 NA Nonspecific Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 3 3 3 80 2R 14588756 14588832 GAGCTGCAAAGCTATATGCA 58 14588874 14588893 ATGTGCTACGGATAGATCCT 57 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 1 6 6 109 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0114622,FBtr0086573 2 3 3 81 2R 14882581 14882599 GAATGTCACCCTACAACGG 58 14882641 14884407 CATAATTTGACCTGATGTGGGA 58 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 1 5 5 93 2R 15023507 15023525 CAACTGCAAGGTGTATGGG 58 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086584 2 1 6 93 2R 15048836 15048855 TAGCAACACAACGAACAGTG 59 15048910 15048986 ATTGACCTGCTTGAGAATGG 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 2 5 6 81 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049030 15049049 CACAATCTCAGCCTTCAGTG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 2 2 4 81 2R 15196583 15196602 ATTTGGACAAGTCGCTTACG 59 15196010 15196540 ACGAAGATCACTGTGGAGAC 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 3 3 10 146 2R 15295396 15295415 CACCAGGTCATTGAGATCCA 59 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 1 2 5 84 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212361 TGAATGGAGCTAGCCATCTC 59 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 1 4 4 80 2R 16355269 16355718 GCTGGACATACGATTTGCTC 59 16355761 16355779 ACCTTGACAGTCTCATGCC 59 NA Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 2 2 2 80 2R 17037697 17037778 GAACAAGAGTACCGCATGC 59 17037635 17037656 CGCATTTAATAGAATCTCGGGA 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 1 4 5 175 2R 17202260 17202341 ATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 2 1 1 60 2R 18547459 18547479 CGCTCTGACCTTGTATATCTG 58 18547558 18547577 GTTGATGAAGTAGGGAAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110 2 1 2 173 2R 18696298 18696317 AATTGGATCTAATCGGCACC 58 18696453 18698949 TTCTTGTCCAGCTCAATGC 58 NA Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 1 2 2 80 2R 19520718 19520737 CCCTACTATGGACTGTAGCG 59 19520779 19529772 TCACCATGTGACAAATCGTC 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 3 3 4 89 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510695 10510715 ATAAACAGAAAGTGGCACAGG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 2 5 9 119 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 3 2 2 143 3L 326149 326167 CAATCCACGAACGGAAACG 59 325966 326045 GCGTATATTCTTGTTCTTGGCA 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 3 5 6 82 3L 352338 352358 TCAGTATCTCGAGTTATCCGA 57 352402 352488 CATCAACCCATCTCACGAC 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112807 2 1 4 175 3L 436842 440504 ATCGGAGCAAGATCTGCTC 59 436685 436703 CCACTGCTATTTGGATGGC 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 2 6 6 80 3L 982095 982186 GCCATAATGGTTGTTATGACG 57 982228 982246 CAGACCATAGAGATGCAGG 57 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 3 4 6 80 3L 982229 982248 CTGCATCTCTATGGTCTGGG 59 982288 983866 GTCGATCATTTCCTTGATCAGG 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112909 3 1 6 146 3L 984146 984165 GAGAACTACACGTTCTTGCC 59 984274 985377 ATTGGCATTATCCTCGCTG 58 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 3 2 2 81 3L 1285038 1285058 ATCTTCCAGATACTCTACCGC 58 1285100 1287940 GACTGTCAACTAGCAGATGG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 3 5 5 100 3L 1635218 1635236 TGATGATCATCATGGGCGT 59 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL23 FBgn0035335 FBtr0072900,FBtr0289966 1 2 2 120 3L 2373059 2373138 TGTAACATTGCCCAGGGAG 59 2372957 2372975 CAGAAATCTGCGGAAACCG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 2 7 12 132 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463163 2463181 CCTTGAATAGCTGCTGGTG 58 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072991 3 1 15 89 3L 3080025 3083747 TCAGATACGGCTGCTATGG 59 3083797 3084816 CTGTCGATTCATATAAGTGGCG 59 NA Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 3 2 2 101 3L 3185486 3185504 GATTCGATATTTGGCGGCC 59 3185568 3185643 GATGGAACTCCGTCATAGCA 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 1 3 3 80 3L 3227695 3227782 TACTTCTCCAGGGAGAACC 57 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 2 5 5 66 3L 3300762 3300780 TAGTACCACCGATCTGGAC 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 1 4 4 80 3L 3365682 3365700 GCGCAAGATATCCTTCCAC 58 3365744 3365821 CTCGACTGTTGCTTCATGG 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204 2 1 2 144 3L 3613953 3614080 GATGAAGGATATCTCGCGC 58 3614188 3614206 ACTGAGAGCAGTAGAAGCC 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 1 6 6 80 3L 4098067 4098086 TTCCGAGTCTCAGGAATCTC 58 4097785 4098029 GTAATACGATCGAACGATAGTTGG 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073265,FBtr0073268,FBtr0073269 2 3 6 93 3L 4133819 4134471 TTTCGACTAATCCAGAAGTGGA 59 4132191 4132209 TTCTCCTCACGGTCTTTGG 59 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564 1 1 3 80 3L 4195701 4195844 GACTGTGATAACTTGCGCA 58 4195888 4195906 CCATTGTCGCAGGATACTC 58 NA Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 3 2 2 94 3L 4402149 4402236 CATGAAACCTATTTGCTCCG 57 4402293 4402311 AGAAACGTCCTGTGAAACC 58 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 3 2 5 80 3L 4503571 4503595 GAGAATGGAAGTACATAGTGAACAC 59 4503448 4503534 AACTCTCGACGGGATTACTG 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982 3 1 2 80 3L 4865994 4866015 CCTTATCGATCTACAGGAGGAC 59 4866050 4866137 CTCTCCATATTAGACGATAAGAGGT 59 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 1 2 2 80 3L 5429398 5429626 GGAGAACTCCTATCGTGCC 59 5429669 5429688 GAGATGCATCGATAGTTGCC 59 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 3 2 3 190 3L 5566920 5568049 TAATCATCAGGCCTACAAGC 57 5566749 5566768 AAGTCTCAAGCATTAGCTCC 57 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 2 4 8 93 3L 5733294 5739572 GATGAAGGACCTAGGGTCC 58 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 1 2 2 80 3L 5773226 5773496 ATAGAAAGCACGAGTAAGGTG 57 5773538 5773556 CTCGAATCTTTCATGGGCA 57 NA Nonspecific Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355 2 1 2 113 3L 6118571 6118590 GAGGACGTTATGAGACAAGC 58 6118413 6118495 GATGTTGTGTTGACTCGCT 58 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 2 1 1 61 3L 6659948 6659969 CCATAAGGAAACTGCTAGAACG 59 6659845 6659866 TGATACGTTCCCAAATTTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 mp FBgn0260660 FBtr0301110 3 1 11 161 3L 7012989 7043673 TAGGATTCAGCTACGCGTG 59 7044342 7044362 ATGGTGTCCAGATTCTGTACC 59 NA Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 2 2 2 81 3L 7113837 7113925 GATGCGAAACCAAGAATATCC 57 7113968 7113986 TTTGCTTCTCATCGCTCTC 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 2 5 9 181 3L 7160482 7160500 GTATGGCAATGACCAGCAG 59 7160240 7160338 CAAACAAAGGATCTGCCTCG 59 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205 3 1 2 97 3L 7729958 7731215 AAACGTAAATCTGTGCTGCAG 59 7729881 7729899 GGATCGTTGAAGACAGCCT 59 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 3 3 3 80 3L 7759493 7759571 ATGAAGAGCTAAGGCAAACG 58 7759432 7759451 GCAACCATATCCACTGTTGG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300500 3 1 7 128 3L 7823585 7823603 ACAACAATGTGTCCTCCGT 59 7811312 7823493 ATGTGGATTTGCCTGAGCT 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0113154,FBtr0076674 2 5 5 195 3L 8349036 8349116 ACTGCCTATAGAAGCTCGC 59 8348859 8348877 AGAACTGGATATGCTCGCA 58 NA Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 1 1 1 107 3L 8593203 8593222 CACCATTGTCAATGTCTCCA 58 8593026 8593046 ACATTCTTGCCATGAATCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 2 5 13 118 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630553 8630571 TTCCTGGGATCGTACTGGA 59 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 2 2 2 82 3L 8670531 8670551 ACTCAAGACTCTGATTCTGGA 58 8670732 8670750 TCTTCTCCAGAATGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 2 2 4 107 3L 8960522 8960540 TGAAGAACATCTCGGGCAG 59 8960607 8960678 GGTAGGATTCAGAGTTCTTTGAC 59 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 1 5 5 124 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 1 5 5 80 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408556 9410759 GCATGAATTATCTCGGCCA 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0089411 1 2 3 139 3L 9721699 9721819 CACCCTGGACTTTATTAGATCAC 58 9721918 9721936 AAAGTTGAAGCGAGTGAGC 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0301858 3 1 3 156 3L 9730320 9730338 ATCTCATCGAGCAACTGGA 58 9729084 9730039 AATTGTAGTCTGGACAAACCC 58 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 1 2 5 121 3L 11219890 11222219 ACCTTTCGAAAGTGTGCTG 58 11222303 11222322 CATACTCGGAGGATTCACCA 59 NA Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 3 2 2 81 3L 11556186 11556409 GCGTCCAAGATAAAGATTAAGG 57 11556450 11556469 CCAAATAGGGAGATCCTCCT 58 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 1 1 1 60 3L 11788069 11788088 GCCAAAGTAAAGCTTCAACC 58 11788167 11788188 AGAGTAGGCTCAATGTAAATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 1 4 4 80 3L 11873192 11873213 AAGCTTCTAAAGCACTAAAGGC 59 11873251 11873329 TGGAATTATCACACTGTGATGC 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 2 4 6 119 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205759 12205777 GGACAAGATCGTAACTGGG 57 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 3 2 2 146 3L 12776711 12776730 CCGTGTAACTGCAAGAAACC 59 12776893 12776911 TACTGGTGGAGGATTCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302488 2 1 2 80 3L 13455061 13455079 CGTGGGAACCTTCATTCAC 58 13455203 13455319 CTGAACAGTTTGAGATTCTGGT 58 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776 3 1 3 160 3L 14061820 14061838 ATCGTACGCTTCACGAGAG 59 14062021 14063035 TTTATGACAGCTTCCTGTTGC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 3 2 6 195 3L 14193538 14193847 CACCTCAAGATGATGACGA 57 14206248 14206266 TCGCTGTACATGTCTTCTG 57 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 2 3 3 80 3L 14981280 14981298 CAATCCCTCATCGTTTGGG 58 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758 2 1 4 132 3L 15486663 15488342 GGAAGTACAAATGGTTAGATCGC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA InUTR Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 3 3 4 81 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540 3 1 4 84 3L 15815228 15815246 TACTGTATCCTCGAAGCGT 57 15815106 15815181 GACAATCTGCTTCTCATTGC 57 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075538 2 1 4 110 3L 15818646 15818664 CTGATCAATAACGCCGTCG 59 15817073 15818573 CAACGCTAGATTGTTGACGT 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 2 2 7 103 3L 16068850 16069333 GTCGGAGTTCTTATGGCAG 58 16069400 16069418 ATATCGATCGCTTGTGGAG 57 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790 2 1 2 98 3L 16624520 16639917 GCATAACGGTACCAAGCAC 59 16622270 16622289 GGAATGTGAGGTAATGGACG 58 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 2 3 3 80 3L 17035132 17035213 GGAACAAGCTCTGCTAAAGC 59 17035071 17035089 GGATGTTGCATGTAGTGGC 59 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 3 4 4 84 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391562 17391582 GCCAGAATGGAGTTAGAAAGG 58 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 2 2 4 163 3L 17558813 17567900 GCGATATTACACCGAAATTCC 57 17558670 17558689 TTTGCTCCGTCTTTATGTGG 58 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075150 1 1 4 113 3L 17962598 17962752 GATGCCGATGGATTCTTCC 58 17962503 17962523 GCAATATTGACAACGATTGCG 59 NA Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 1 1 1 79 3L 18716321 18716341 CGGCATTAAAGATTGTTCGAC 58 18716207 18716225 GTTGCTTGCGACTGTACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pip FBgn0003089 FBtr0075013 3 1 12 177 3L 19311971 19311989 AACAAACTGAACAGTCGCC 59 19303884 19306261 TATATCCGACCTTCTGGCC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075011 3 1 12 91 3L 19294006 19294080 CCGATTGTCTACCCTTTAATTCC 59 19293937 19293955 CTCTTCCCAAGTACCCACC 59 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 3 2 3 84 3L 19488012 19489662 CTGCTGCATGTGGTATTCC 59 19487946 19487970 GATAGTAGGTCTCATTTACATAGGG 58 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 2 4 4 81 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634304 19635000 CTTATAAGCAACACCCTTCACG 59 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 1 3 3 80 3L 19719797 19719815 TCACTGGCGATCTCAAGAC 59 19719595 19719756 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 3 2 2 144 3L 19811638 19811656 GAACAGGTTGACTCCTCCA 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 3 2 2 80 3L 20005283 20005301 CTGAACTCCAAGATCACGT 57 20005344 20005421 AGTTATTGAACCTTGGTCGT 57 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 2 5 5 145 3L 20381816 20381834 GTCTACTTCGAGCCCAAGG 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 2 2 3 130 3L 20998179 20998197 GAATAAACCGCCACAGGAC 58 20995287 20998085 TTCCCAGATGTTTGGTGCA 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 2 3 3 62 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265937 21265955 CAGTACCGATCGTTTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 1 2 3 80 3L 21565944 21565965 CAAGTTCAGCGAATTTATGGAG 58 21566003 21566089 GAGTCAAAGTCATATTTGTCGG 57 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 2 2 2 116 3L 21675526 21675608 AAATTAAGTGTCTGGAGCACAC 59 21675685 21675703 GATTAGCCACTTCATGGGC 58 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0113188 3 1 2 95 3L 22726681 22728019 TTCATGGAAACGTGCTGAG 58 22726604 22726625 GAAATTTAAACGCTTCCTCCAG 58 NA Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912 1 1 2 95 3R 189435 189453 TACTGGTGGCAGTCTTCAC 59 189512 189950 ATAGCTTTAGCTCCTCGCA 58 NA Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 2 2 2 151 3R 359083 359101 AGAATGAGGCGTTCCTAGC 59 359277 359295 AAGGCTAAGGGAAGATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 2 2 2 82 3R 468366 468479 CCAACTATCTAAACTTCCTTGC 57 468520 468540 CCAGTACTGCAGATACTTCAG 58 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 2 2 2 105 3R 1063869 1063944 ATTTCGATCGGCATCAATGC 59 1063783 1063801 CTAGAACACCGTGGTCGAG 59 NA Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 2 2 2 253 3R 1227159 1227241 TACTGGACTATGTGCACTGC 59 1226925 1226943 GAACTTCTTCACCACGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 2 2 2 82 3R 1369007 1369096 CAGATACGGGCTTTATTGGA 57 1368944 1368964 CGTACCTAGGAATCCTTTCAC 58 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 3 4 4 80 3R 1404085 1404170 CATAAGTGAGGAGCTCGAC 57 1404214 1404232 AATCCAGAAGACTTTCCGC 57 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300913,FBtr0078676,FBtr0300907 2 4 12 86 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1586960 1587383 CAGTTATGTCCGAATTTGTGG 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 2 4 4 87 3R 2211842 2211860 AACAAGTACGACACCTGTG 57 2211911 2212066 TGTGATAGGGATGTGAGCA 58 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 3 4 4 88 3R 2211841 2211860 CAACAAGTACGACACCTGTG 59 2211910 2212066 TGTGATAGGGATGTGAGCAG 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 3 5 5 125 3R 2217058 2217076 GATCCAATGCACCAAGGAG 58 2216805 2216890 TCAAAGACAGCCTTGATGC 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494,FBtr0300495,FBtr0113199 2 3 9 112 3R 2922690 2922712 AGCAGTAGTAATCCTACAAGCTC 59 2922534 2922618 GACACGTGTCTCATTCCCA 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494,FBtr0300495,FBtr0113199 3 3 9 112 3R 2922691 2922712 AGCAGTAGTAATCCTACAAGCT 58 2922534 2922618 GACACGTGTCTCATTCCCA 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302183 1 1 3 123 3R 3022103 3024056 CTATCGTCCAATGGGAATGC 58 3024142 3024160 GATGCCCGTTGCATTACTG 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184 1 1 3 119 3R 3023373 3024059 TATATGCAGGGAATGCCGG 59 3024142 3024160 GATGCCCGTTGCATTACTG 59 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 2 3 4 182 3R 3100072 3100726 GAGGATATTGCCTCGACCC 59 3099908 3099926 GTTCTTGTTCGGGAAGCTG 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 3 3 4 89 3R 3586918 3586936 ACACGCAAAGTAGTTGGGA 59 3586987 3587739 ATTCCTACAACTTCCTTGTGC 58 NA Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 2 2 2 80 3R 3670934 3670953 TTGATAGCCACCATCAGGAG 59 3670995 3671117 GTTTGGATTGAGCAGGTAGG 58 NA Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 3 1 1 242 3R 3737418 3737436 AACCGTTGCGTAAATCAGC 59 3737117 3737135 GCAATGTCCATTTGGGTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 2 2 2 60 3R 3804742 3804760 CTGGTGATGCTTCAGATGG 58 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 3 2 4 80 3R 4622470 4622490 AAGACTGACTAACGAGATTGC 58 4619073 4622433 GTCTTTATTTCCTCTAACTGGGTC 59 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922 1 1 2 80 3R 4650602 4650683 CTTGACACGGAAGATCATCC 58 4650721 4650744 CTTCTTAAAGATCCCGTAGAACAG 59 NA Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 1 1 1 60 3R 4834594 4834613 GGCACAGATCTACCAAAGAG 58 4834694 4834712 CTGAGTGTTCCTACGTACC 57 NA DesignNoJunction Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 2 2 2 97 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088725 5088805 TGATGGCAATCCTCAAACTC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 3 2 14 96 3R 5262830 5269741 GCAAAGCTTCTGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 1 2 3 89 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367655 5367673 TATTCCCGTTGTTGTAGCC 57 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 1 3 4 83 3R 6121773 6122463 GTGGCTGAAATCTTCACCG 59 6122510 6122528 TTCAGGGTAATCGAAGCCG 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 2 3 4 85 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122529 TTTCAGGGTAATCGAAGCC 57 NA Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0082238 2 1 2 179 3R 6191845 6197884 CATTACCGTGACGGTTTCG 59 6191609 6191627 GAGGTGGTTCCGTACTGAC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 1 7 8 88 3R 6417176 6419285 AGTCGACTCACTGATGGTG 59 6411626 6411647 AGAAGTTATCGCATAACTCGTG 58 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082255 2 1 8 86 3R 6359717 6374336 ATATGATGGACGATGGTGTC 57 6359650 6359668 ACTGAGGAATACAATCGCC 57 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 3 6 7 186 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692400 6692535 TGTTTGTTGTAGCAACCTGTG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 3 3 7 110 3R 6689535 6692258 CATACCAGAACGTATACGCAC 59 6689445 6689463 GAATTGATGCAGTAGCGCT 58 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 1 5 5 126 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100465 2 1 4 220 3R 7388841 7388862 ACTAAATGCTCTGATAACCTGG 58 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082534 2 1 2 189 3R 7582207 7589216 GAGTCAGTCAGACGGACAG 59 7582036 7582057 CTGAAAGGTTGAGGAATGAAGG 59 NA Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 3 1 1 88 3R 7718579 7718598 AGACAGGTATTTGTCCCGTG 59 7718457 7718476 ACGCTCTGAACAGTTAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 2 2 3 121 3R 7777492 7777510 GAACGAAGAGATTGCAGCC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 3 5 15 149 3R 7815047 7817813 GAGTCCTCAGATAACTCCAGC 59 7814508 7814937 GATGGTGTCCACATTGAACG 59 NA Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 1 2 2 80 3R 8378964 8379504 CCTTTCTTCCTGTGGTACAC 58 8378903 8378921 CCAGAAGAGGATTGAGACG 57 NA Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 3 1 1 60 3R 8467268 8467286 CGGACTCTATGCCTCATCG 59 8466969 8466987 GTAGGCTAAGGAGTCCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744 1 2 3 80 3R 9135613 9135632 CTTGTAGATCGGATTACGGG 57 9135672 9135883 TGTGGAAATGATTGATCTGGAG 58 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 135 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 2 2 4 124 3R 9468114 9468132 GACGGACAGGGATCATACG 59 9462788 9468027 TAACCGTAGCCGTCATAACC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 3 8 8 146 3R 9487574 9487894 GCTTTGTGGAATTCGAAGAC 57 9488068 9488086 CATATCGATCGTCGTAGCG 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 2 2 10 96 3R 11001975 11001993 TACTTGAGGGACAAGCCAC 59 11001577 11001918 CTCTTATAGCCTTGTTGAGCTC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0110961 1 1 3 101 3R 11015639 11015732 AGTCATGGTCATAGTCATGCA 59 11015795 11015813 CTGATGGGTTATTCCGCCA 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 1 2 13 120 3R 11127370 11127391 GAGACGCAAATCAAAGTATTGG 58 11128938 11129374 TGAGCAGGTCATCTTCGAG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 3 7 13 147 3R 11122418 11125005 GAAATACGATGAGGTTGCCC 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 3 7 13 147 3R 11122418 11125005 GAAATACGATGAGGTTGCCC 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 1 2 2 80 3R 11229214 11229232 GGCATTGTTCTCAGCATGG 59 11229096 11229172 GGATTCATGCTGTTTAAGGGT 58 NA Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 2 2 2 80 3R 11271111 11271129 CAGTTCTGTGACAAGTCCG 58 11270982 11271067 CGTCACAGTGAGATTGAGG 58 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 1 3 3 80 3R 11742175 11742195 GAGGAGTGTCTTCCTATTTGC 58 11742055 11742134 GTCGCTCAATTACCGATAGG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 3 5 8 105 3R 11780833 11780853 GAATTACTTCTACCGCGTCTC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 2 5 8 102 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113477 3 1 2 117 3R 11995736 11995822 CGCTACTGAACAAGATCGAG 58 11995902 11995920 TTGTCTGTCTTCTGACGCA 59 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0113241 2 1 2 98 3R 11998230 12003271 TTTGTCTTCCAGATTGCGC 59 12003331 12003351 GGAGGACTGACTAATATTGCG 58 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 2 2 2 129 3R 12209799 12209821 CATAAGGATAAGGAGGATAACGG 58 12205508 12209710 ATCCATTTAGGGCCTGGAG 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352,FBtr0083347,FBtr0083349 2 3 6 69 3R 12558425 12558443 AGTGTCCTGAAGATCCGAC 58 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 2 2 2 65 3R 12819335 12819355 CGTAAACCTGGACATAAACAC 57 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 3 3 3 82 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894759 TAATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 3 3 3 109 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901809 12901827 GTAAACCTCTCGCTCCTCC 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 1 3 7 82 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0083586 1 1 2 80 3R 14191441 14191461 CAAAGCAAACGAAAGGAAGAC 58 14191320 14191402 CTAACTTCTCAGTCACATCTGG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 1 3 14 90 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089367 3 1 2 81 3R 14555971 14556059 TTTACAGTAAGGATCATCTCCGG 59 14556100 14556118 CCCAGGATGTTCTTCACCA 59 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0083684 2 1 2 112 3R 14568806 14568826 CATCATAGTACCGTTACAGCT 57 14564312 14568734 TACTCAACTCTTGCAACATCC 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110917 1 1 8 81 3R 15287175 15302853 GTGAAGACAATGGATGAAAGAC 57 15302893 15302913 ACTGGGTATCGATAAGATGTG 57 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083764,FBtr0110919 3 4 8 80 3R 15310659 15310775 GTGATACGAGTCGCATTATGAC 59 15310813 15310834 GAGAAGACAATGATTCCAGGAC 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100127 2 1 7 145 3R 15579575 15583547 TGGCACAGATAATAAGGCC 57 15586034 15586053 GGATATCGTCGAACTTGAGG 58 NA Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 1 2 2 80 3R 15697098 15697120 CCACATGAACTATTTATGGCTGG 59 15696710 15697058 GCGGAGATACCAATCTCCC 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 3 5 5 84 3R 16396364 16396823 GTCGACAGGTAAATCCTCTG 57 16396870 16396888 ACGTTGTCTATCTCCCGAG 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 2 4 9 112 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798981 16798999 AGTTTCTTGGGCAAGAAGC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0084139 3 1 2 95 3R 17701271 17701289 CTGTTTCGTCATGATGGCA 58 17701348 17701450 CCATGTCGGAACAGTATGG 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 2 2 2 81 3R 18274273 18274291 ATAGTGCTGGCTATCTGCA 58 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 2 2 2 103 3R 18981604 18981622 CCCGGAGATCTACAAGTCG 59 18980678 18981537 CCATTGAGCAAGGTTCCAC 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 1 2 6 112 3R 19095556 19095574 TTGGCAGACTGACTAGTGG 59 19095315 19095480 TGTGATTGGATTGCAGTCG 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 2 4 4 100 3R 19870978 19871167 AAATCAAGGTCAACTGGGC 58 19870896 19870914 CTCAATCTCGGGACTGAGG 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 3 4 4 118 3R 20048094 20048115 CTTCCTGAGAAAGTATCTAGCC 57 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 3 3 3 166 3R 20647298 20647316 AAGCAGCTCGTATTTGCAC 59 20647445 20647532 CATAACGCTTGTTACCGAGG 59 NA InUTR Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 2 2 2 60 3R 20683123 20683144 AATGTAAAGTGCGGTGAAAGAC 59 20683024 20683104 ATGTAATGGCATTGCATGACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11120 FBgn0039250 FBtr0084717,FBtr0084716 1 2 2 80 3R 20749881 20749900 GAGTCCTATTGAGGTTGCCA 59 20749943 20750013 CGCCGGTTATTGACATTGG 59 NA Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 3 2 2 84 3R 20771732 20771751 TTTGGTAGTTATCACCCGGG 59 20771795 20771874 AATGTTGCTCTGATACTTGGTC 58 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881 1 1 2 80 3R 21345439 21389810 TCCCAAATCTAAGGTTTCAGAC 58 21400606 21400625 CGTTCATCTCCGATACTGAC 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 3 4 4 96 3R 21448152 21448170 GAGTCTACCAGGGATTCGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 2 2 7 160 3R 21539673 21544127 CGGATTGGAATCAACTTGC 57 21539346 21539366 TACACATGAACATCAAGGAGG 57 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 3 3 5 91 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711699 GAAGAACATGATGAGCAGTGAG 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 3 3 9 96 3R 22699711 22699801 ACAGCTACCCATATACGGG 58 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0113296 1 1 3 81 3R 22886886 22886970 CCTAGGCCTTAAGAAATCCAG 57 22886825 22886843 GTCCATCGCATAGATGAGG 57 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085140 1 1 12 85 3R 22893137 22893155 AGTGGCAGACTATAAGGCC 58 22892378 22893088 TGTCCGTCCTCTGTAAGTG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137 3 1 12 100 3R 22892598 22892853 CCTCTTTAATACGTCCGCG 58 22892516 22892537 TCGGAGATTGATTCTGATTCTG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 3 2 12 96 3R 22892108 22892126 TAAAGAGCACAATCCCTGC 57 22891940 22892048 GAATCGCTCGTCTGAAAGG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 2 4 4 110 3R 24146990 24147102 TGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301180 3 1 4 196 3R 24159595 24159614 GAAAGTACACAAGGATCGCA 58 24151529 24159436 GTTTGGCCGATATCTTCCA 57 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 2 2 4 81 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350956 24350974 AGTGTCGTAGTACCAGCTG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299753 2 1 13 80 3R 24727254 24745226 ATTATCTAACAGCAAAGCCCG 58 24745267 24745286 TGTGATGGAGAATGTCTCCG 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113304 1 1 2 84 3R 25001138 25002275 TAAGACAGGACGTATGATCCG 59 25001074 25001092 GAGTCTCGAACAGGTGGAC 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113304 2 1 2 87 3R 25001138 25002275 TAAGACAGGACGTATGATCCG 59 25001071 25001089 CAGGAGTCTCGAACAGGTG 59 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 2 2 2 128 3R 25323834 25323855 GGGCCTGCTTAAGTTTATACAG 59 25323943 25324030 ACAATGATCTTGCAGTTGCC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 1 4 6 80 3R 25723356 25727912 CGGAAGGAAATGAACGGAC 58 25727953 25727974 CTCTTGGATCGATTCGTTAAGC 59 NA Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 1 2 2 80 3R 25818490 25818566 GGGAGATTTGACCAATTTGGG 59 25818430 25818450 GGTAGGAGGTTTGAATAGCGA 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0113483 2 1 12 80 3R 26398782 26399969 AACATCGACAGAATCTTCCG 58 26400012 26400030 CTCAATCTCCATGTTGCCC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 2 10 12 114 3R 26398692 26398710 CTGGTGGAGAAGAACTCGT 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 1 5 13 98 3R 26419560 26419842 ACGCCTAGAAACTCTACTCC 58 26419481 26419499 GACCTTGACAATGTGCTCC 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 1 3 4 80 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006478 27006498 AGATCACCAGGAAGATAATGC 57 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 3 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 1 3 22 81 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707522 27707543 CAGGTCCTGATTGTTATTGTCG 59 NA Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 3 1 2 61 3R 27892051 27892071 TCATCTCAAGCTCCTCTACAG 58 27887193 27887217 CATGAGTGTATAATAGAAGGGAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 1 2 4 97 3R 12571211 12571231 CCAATATGCTTCGGTAATCGT 58 12570413 12570433 CCAATGGGAAGTGATAATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 2 2 4 98 3R 12571211 12571231 CCAATATGCTTCGGTAATCGT 58 12570412 12570433 TCCAATGGGAAGTGATAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 3 4 8 81 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162749 162840 GCAGATGAACCCAACAAGTC 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300343 1 2 3 80 4 502324 502450 TTACTATGCGTTCCAAACGAC 59 502264 502284 ATCTTGTTTGGAAGAAGGCTG 58 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 1 3 6 90 4 636726 636745 ATGAGATCGAAGCATCAGGA 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 2 3 6 91 4 636725 636744 CATGAGATCGAAGCATCAGG 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089245 1 1 3 84 4 902562 903594 TTGATTAGGATGACATTCGGTG 58 902499 902517 ATGTTCCCTCAACTGTTGC 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 1 5 5 80 4 1230675 1230693 CAAGTAGCTCAAGTGGCTG 58 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 1 4 4 99 U 1179119 1179137 ATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 2 1 1 60 U 2759807 2759826 ACACTTCATGACAGTACGGA 58 2759712 2759732 CTGGTTTCATAGTAACAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929 3 1 2 80 X 477099 487689 GCATGTCTACGACTTATTCGA 58 487730 487749 TCCAAATTCAAGATGTCCGA 57 NA Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 3 2 2 92 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505983 506003 TGAAGTATTGGTTCCCTGTCC 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 3 5 6 87 X 640137 640556 CAAAGAAGCGAGACGACTC 58 640606 640625 AGTATGTGATAGCTGACCGT 58 NA Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070135 3 1 3 245 X 653711 653798 GGGTTTCGTCTTGTCTCCA 59 654007 654025 CCATTCGTGTTGTAGCTGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299511 1 1 2 150 X 715999 737159 GAAGCCGAAGATAAGGTGC 58 715867 715885 AACAATGGTTCTTGGCCTG 58 NA Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 2 3 3 80 X 1185594 1185673 CTATGAGATATCCAAGATTCCGC 58 1185536 1185555 TTGATGGTCAGCATGAAACG 59 NA Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 3 2 2 97 X 1347991 1348058 TCTATACGATCGTGGGAGC 58 1348118 1348137 CTACTGTCCGTTGGAATCAC 58 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 2 2 3 84 X 1365374 1365451 TCTCGCACGAGTATTACGT 58 1365499 1365517 ATGAAGGACATGGTCACGA 58 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070262 3 1 9 88 X 1531146 1531164 CCAATATCGATCCCTCAGC 57 1531360 1536928 CGTCAGTTTACCTTGAGGG 57 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 3 3 3 88 X 1861943 1861962 GTGAAACGCCAGACTTATCC 59 1862013 1870613 CTGGCATGTCACATTCACC 59 NA InUTR Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301058 2 1 4 87 X 2817394 2817719 TCGGATTCTTCGGACTTCG 59 2817769 2817788 CTGGATGATGTTCCGTTCTG 58 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 2 3 3 82 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360595 3360614 TATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 3 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706,FBtr0070707,FBtr0070705,FBtr0070704 2 4 4 185 X 4585718 4585738 CCAGTGAAGTTGTAAGCACAC 59 4592337 4592355 TCCTTCTTGATGTAGGCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 3 4 4 92 X 4619144 4619163 TCCAGCACTATGACTATCCC 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 2 4 6 118 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848235 4848253 GGTCATTAAATCCGCGTCC 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 1 4 4 80 X 5317038 5317158 AGAACACTACCAGACACCTC 58 5317200 5317219 CACTCATAGCACCAGATGTC 58 NA Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 2 2 2 152 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425327 6425345 GTCGTTGTTATCGACGGTG 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 1 4 6 123 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 2 4 6 124 X 6456387 6470831 ATAGTCAAGGCGTGAAGACC 59 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 3 3 6 154 X 6681509 6681529 GGATGAGAATAGTCAGTGCTC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 2 3 3 75 X 6773791 6773809 TACACATGGTCAGCCATCG 59 6773848 6773866 ATACCATGGATGCACCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 3 3 3 81 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333786 8333864 CATACTCCCGTAGCTTGCT 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 1 4 6 80 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8444124 CATTCATGCCTGTATCGCC 59 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 1 4 4 135 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 1 2 2 169 X 11005434 11005515 ACGAGGATCAGAAACTCGG 59 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 1 1 1 79 X 11022925 11022943 GTAACAGTTTCGCCTCCTG 58 11022796 11022814 GTAGTACTTGGCCTCTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 1 2 3 80 X 11494347 11498352 GATATTTGACAAGCACGACTC 57 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0073591 2 1 2 81 X 11818236 11818254 GCTGGACAAGGAGTTATCC 57 11816389 11818194 GTTCACAACTTGAAAGATCCAG 57 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 2 3 3 81 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346755 12346776 AATTAGCATTTCGTAGAGCAGC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0300435,FBtr0300434 3 2 8 111 X 14824478 14824791 CCTTACACTTAAGAACGCTTACAG 59 14824861 14824879 ATCTCGATGCCCATACGAC 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 3 4 4 108 X 15229293 15229393 TTCCAGAATGCTGTCAACAG 58 15229464 15229482 ACTCGTAGTGCTCCTTGTC 59 NA Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 1 2 2 80 X 15360145 15360260 CGGAAACATAAACAAACTGACG 58 15360301 15360319 TTCAGCACGATCAGATCCT 58 NA Nonspecific Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 2 3 3 187 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377388 15377406 ACATCGGCTTTGTCTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059 3 1 2 96 X 15597281 15597299 CTATGTGATCTCCGGCTGG 59 15597107 15597221 GTGTTTGCAATGCGTTTGG 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 1 4 9 103 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717401 15717419 CGGAATTCCAGTTTCGTCC 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 3 5 5 84 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 3 3 4 92 X 16190156 16190353 CCCTAGTTGCGATTCTACAG 57 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 3 9 9 80 X 16273082 16273102 CCATTTGGTTATGCATGAGCA 59 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352 1 1 4 129 X 16651140 16654373 TATTGGCAAGGTATGGCCA 59 16651029 16651047 CATCGAAATCACCGGTGAC 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 2 3 5 81 X 16717174 16717194 TCGTGCTAATCTGCTTTATCG 58 16717237 16717635 GTCGATTTAGGCCAGTCAC 58 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074340,FBtr0074341 3 2 2 81 X 16778986 16779005 AAAGTCCCAAGAGATCCTGC 59 16779047 16779126 TTTATTGTCGTCGATGAGCAG 58 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487,FBtr0290036 1 2 2 73 X 17520985 17521003 ATGTGTACGCCATATTCCC 57 17519649 17519667 ATCTTGGATATCACGCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302834 1 1 5 119 X 17615639 17640617 AGTGAACTAGATACGTCCTATGAG 59 17640695 17640713 GAAGTTGGTGAAACGCGAG 59 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 2 3 4 113 X 17743836 17743951 ACTTGAACAAGTCCCTGGA 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 2 2 4 97 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040091 19040109 GGAGAATCGTTGACTGCTG 58 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694 1 1 2 103 X 19093490 19093871 AACTATGGCCAGATCAACAC 58 19093406 19093424 AGTTCATGGAAGCTAGCCA 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302863 2 1 6 80 X 19418181 19420879 TGATAACGATGACAAGAAAGGG 58 19420920 19420938 CTGTTGTTGGTTGAGGTCG 59 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 3 2 2 80 X 19506166 19506185 CAGTGATATCTGTGTCCCGA 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 1 2 2 60 X 19565030 19565050 CATCAAGCAGATCTGCATGTC 59 19565154 19565175 GAAAGGCTTCTCGATAATCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 3 2 2 85 X 19752778 19752796 CTTTCGCAGAAGTCGATCG 59 19752845 19752946 CTTTGTTTACCGTTGGGCC 59 NA Drosophila melanogaster 61 hydra FBgn0031128 FBtr0300487 2 1 3 90 X 20543395 20546175 TTTAAAGACATCGCTCCGAC 58 20543324 20543344 CTCGAATCCTGAATTCTTCCA 57 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112569 3 1 5 112 X 20676939 20676957 ATATAAGTCGGGCCCAACG 59 20663757 20676866 ATGAGACACCGATGATCTACTC 59 NA Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 3 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 1 2 2 84 X 21879072 21879090 GTACTGACCATCCTGGTCG 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 tRNA:K2:42Ea FBgn0011892 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30202 FBgn0050202 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-6-2 FBgn0046818 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:D2:69F FBgn0011844 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:84Fc FBgn0011961 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-iab-4-3p FBgn0082171 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-aca2 FBgn0082924 FBtr0113562 1 1 1 60 X 7795147 7795165 AAATGTCCAGTGATTGCGT 58 7795105 7795123 TAAGTCGAATTGCAGCGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1060 FBgn0083013 FBtr0113560 2 1 1 60 X 6637007 6637027 TTAAATCAGTGAATGCCAGCC 59 6636967 6636985 TTCTTCTAGCAGCAATGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12446 FBgn0031201 FBtr0077343 3 1 1 60 X 22212379 22212397 ACTTTCCGTTGAGCTACTG 57 22212337 22212356 TATGTTAAGGAGGGTGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0113007 3 1 2 88 X 20907654 20908644 GAAGACTACAGACCGACGA 58 20908696 20908714 GTGCTGCACAAAGAAACTG 58 NA Drosophila melanogaster 61 Ser6 FBgn0011834 FBtr0077272 3 1 1 60 X 20833966 20833987 CAACACCCTAAAGTCGATAACC 59 20833927 20833947 CTCAAATCCGAAATCGATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9577 FBgn0031092 FBtr0070007 2 1 1 128 X 20061145 20061234 ATGTGGCTGGAGATCAAGG 59 20061326 20061344 GCCCACGTTTATCATGTCG 59 NA Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 3 2 2 135 X 19729780 19729800 AAATCACTGCTGGTTGATGAG 59 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 CG12703 FBgn0031069 FBtr0074795 1 1 1 80 X 19652301 19652388 CGTGACCAGATCATTTATCCA 58 19652430 19652448 CAGGTAGTGCATGAGATCC 57 NA Drosophila melanogaster 61 CG6470 FBgn0030933 FBtr0074621 1 1 1 99 X 18408441 18408459 CTCCAGCTCAGGAAGAGAC 59 18407853 18408381 GATAGCAATAGATTGCAACTGC 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 1 6 6 80 X 18286506 18286592 TTCATCAAACATCACCAGGT 57 18286445 18286463 ATTCAGGACATAGACACGC 57 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 1 2 2 108 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208873 18208891 CTTCCTTGACCTCCGACTG 59 NA Drosophila melanogaster 61 CG8316 FBgn0030852 FBtr0074485 3 1 1 87 X 17525844 17525926 TCGAGGAGCAGATTGTAGG 58 17525775 17525794 TTATCCTCCACTACCAAGGC 58 NA Drosophila melanogaster 61 CG5070 FBgn0030824 FBtr0074389 1 1 1 60 X 17097255 17097275 GTAGTAGTTGCGATGGTTTCC 59 17097296 17097315 GATTAAGCTTGCCAAAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 3 2 2 107 X 16721788 16721807 ATCATCTGCGGTTATGTCAC 58 16721630 16721719 GGAGTTGATATGTGGCATGG 58 NA Drosophila melanogaster 61 CG9676 FBgn0030773 FBtr0074364 2 1 1 109 X 16594027 16594045 ATCTCACTACGTCGACGTG 59 16593881 16593954 GCTGGAGCTACATTGTTGC 59 NA Drosophila melanogaster 61 crl FBgn0015374 FBtr0074283 3 1 1 161 X 16488064 16488147 GCGGAATACAAACAGTTAACAC 58 16488350 16488370 ATAGTCGGTCGGAAAGATGAG 59 NA Drosophila melanogaster 61 CG3679 FBgn0027521 FBtr0074222 2 1 1 88 X 16198165 16198293 CTTGCATCAAGGGCATGAC 59 16198345 16198363 ACTCTCGCTCTCAAGATCC 58 NA Drosophila melanogaster 61 CG8958 FBgn0030725 FBtr0074207 3 1 1 80 X 15978040 15978115 TATCTAGCCCTGTCTAGTTGTG 58 15978153 15978174 TTTCAACATATGTGGCTTCAGG 59 NA Drosophila melanogaster 61 CG12698 FBgn0030721 FBtr0074139 3 1 1 80 X 15901394 15901413 TGGGTACCATGAGCTATGTC 59 15901452 15901542 CCATATTGACCTTCATGTGAAGG 59 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112 1 1 2 70 X 15762248 15762266 CAGTCGATTCCTTGCAAGC 59 15762371 15762392 TCCATTGATACCAATCTTCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15601 FBgn0030673 FBtr0074055 2 1 1 74 X 15605453 15605471 CTTTCTACGCTCCGTTTCC 58 15605560 15605579 GTCGTTAATTGAGCACTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG42299 FBgn0259195 FBtr0299679 3 1 1 80 X 15469577 15469653 AAATGGCAGAAGTCGTGTC 58 15469515 15469533 ACTTCTCGATGGTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 CG5662 FBgn0030620 FBtr0073999 3 1 1 60 X 15105028 15105048 GATACTGAAGGTCTACCGGTG 59 15105070 15105088 GCTCACCTCCTGGATTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 2 4 4 106 X 14642087 14642674 CATTCGAGCCAATGGTCAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 CG18313 FBgn0030566 FBtr0073915 1 1 1 115 X 14274390 14274408 TTGATTCACATCTCGGAGC 57 14274541 14274559 TGTCGCTTGTTGAAATCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lig4 FBgn0030506 FBtr0073847 2 1 1 80 X 13560304 13560325 GAAGCAGGGATCAAGATATCAG 58 13560183 13560264 AGCCCTTTGATGTAATCAGC 58 NA Drosophila melanogaster 61 CG32641 FBgn0052641 FBtr0073729 2 1 1 60 X 13078653 13078671 ACCGACGAGGAAATCAGAC 59 13078692 13078713 TCTTATCCGGATGGTAAATGAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073687 3 1 2 82 X 12639828 12639847 GAGCTTTATTGTGAAGCGAG 57 12639892 12640911 TGTCAACATCTTCGGTCTC 57 NA Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0302182,FBtr0073591 1 2 2 80 X 11816310 11816328 ATCTCAGTGGCAATGTGCT 59 11816184 11816271 GTGACAGATTAAGATCTGTGATGG 59 NA Drosophila melanogaster 61 e(y)2 FBgn0000618 FBtr0073540 1 1 1 60 X 11470248 11470266 GATACGCACCATTCTCACG 58 11470206 11470224 TTAGGATTCGTCCTCTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32668 FBgn0052668 FBtr0073469 3 1 1 80 X 11053043 11053129 TTAATGCGATCCTCCAGGA 58 11052981 11052999 GTCCTCCTAGGATGAAGCC 59 NA Drosophila melanogaster 61 CG16922 FBgn0030254 FBtr0073389 1 1 1 60 X 10850647 10850667 AGTCAAAGATCTCGGTCAAGG 59 10850688 10850707 ACCTCATTGGAGTTCATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 1 4 4 135 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 Neb-cGP FBgn0083167 FBtr0071449 3 1 1 239 X 10354787 10354808 CGATAGACCTCGATAGACTCAG 59 10355164 10355182 TTCTTCTTGGGCTTCAGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3099 FBgn0030145 FBtr0071365 3 1 1 68 X 9514507 9514529 GCAGTTTCTATCGCAAACTAGAG 59 9514554 9514636 GAATGTGCAGTTTAAGCTTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Gga FBgn0030141 FBtr0071363 1 1 1 94 X 9496623 9496641 CGAGCTATACAAGAGCTGC 58 9496699 9496786 GAGTGTCAGCTACAAGCTG 58 NA Drosophila melanogaster 61 CG34028 FBgn0054028 FBtr0100083 3 1 1 73 X 9405577 9405598 GCCACCATTACTCATACTTGTG 59 9405631 9405719 TCCACGTTTGTTTACTTCGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG12106 FBgn0030100 FBtr0071306 2 1 1 67 X 9088209 9088227 TTCCTTGAAACTGACGCTC 58 9088322 9088340 CGTTCTTGGCATACAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Zpr1 FBgn0030096 FBtr0071342 2 1 1 115 X 9055409 9055430 GCAATAGTTTCATCGAGAATCC 57 9055201 9055219 GTGATTCTGCTCGTACAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10970 FBgn0030078 FBtr0071356 2 1 1 85 X 8963892 8963910 TAAGAAGCTCATCCTGGCC 59 8963825 8963846 TGTATTCCTGGATGACTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32710 FBgn0052710 FBtr0071252 1 1 1 275 X 8713304 8713814 AATTACAACAGCGGAAGCA 58 8714662 8714680 AGCACTTTGTTGCGTAACC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG2004 FBgn0030060 FBtr0071281 3 1 1 121 X 8607724 8607742 TAAGAAGCCCTTCGTGGAG 59 8607428 8607640 TGTAGTCTTGACGTACAGGT 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071209,FBtr0301762,FBtr0071208,FBtr0301764,FBtr0071207 3 6 6 81 X 8426428 8426448 CGCAACAGAATAAGGAAAGTG 58 8426489 8438894 ATCCAACTATATTCTGGCTCG 57 NA Drosophila melanogaster 61 Cp7Fc FBgn0014466 FBtr0071202 1 1 1 125 X 8371219 8371310 TCACGCTGAGAATCTAAGTG 57 8371398 8371416 TTATCGTATGGCTCAACGC 58 NA Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0100003 2 1 2 290 X 8365000 8365425 CATTCAATTGTTGATGGCGG 58 8366370 8366388 TTTCCGTACACGGATCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081,FBtr0071248 1 2 2 80 X 8302347 8302428 GACTTCATGAACCCAGGTG 58 8302285 8302304 TCTTAGAAGTCATCTGCACG 57 NA InUTR Drosophila melanogaster 61 CG1387 FBgn0030033 FBtr0071173 1 1 1 92 X 8281594 8281686 GGGTAGATATGAAGAAGACTTAGG 57 8281737 8281755 TTAACATCCCAATCGCCTG 57 NA Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127,FBtr0071128 2 2 2 60 X 7848277 7848295 GGATGAAGGCGAAGATGTG 58 7848235 7848256 GCTATCAATCTTAAAGCACGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127,FBtr0071128 1 2 2 60 X 7849535 7849554 AAGATGTTCTTCAAGAGCCC 57 7849494 7849513 TATGGACATCGGGATACAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42246 FBgn0259098 FBtr0299508 2 1 1 123 X 7305738 7305819 GATCCAAATGACACTTGCAC 57 7305634 7305655 CGTATCTCTGGTATAACCAGTC 57 NA Drosophila melanogaster 61 CG32727 FBgn0052727 FBtr0071056 3 1 1 104 X 7301440 7301458 TCTTTAGATCGCCCAACAG 57 7301526 7301603 ACATCCGTTTCTGAAAGCA 57 NA Drosophila melanogaster 61 CG1958 FBgn0029940 FBtr0071046 3 1 1 60 X 7161670 7161692 CTATAACTTCTCTGATGTGGAGG 58 7161712 7161730 CTTGAGATACCTAGCAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4617 FBgn0029936 FBtr0071019 2 1 1 80 X 6997756 6997839 ATCTCCAGGATCTAGACTTCAC 58 6997697 6997715 TGTTCTTGTCCCGATTGGA 59 NA Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300759,FBtr0300760 3 2 2 97 X 6917121 6925880 ATTTATGCCAAGGGTTACGC 59 6917043 6917064 CTTGGCATCAAATAGTGACTGG 59 NA Drosophila melanogaster 61 CG12796 FBgn0029909 FBtr0070973 1 1 1 80 X 6726266 6726286 TCCATGTTGACTCTGATCTCG 59 6726136 6726229 GGTCATGTATCTTCTATAGTGCAG 58 NA Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 3 2 2 84 X 6574457 6574475 CTATACGACGACCACTTCC 57 6574523 6574610 TGCTGATCACCTCATTCAC 57 NA Drosophila melanogaster 61 CG3973 FBgn0029881 FBtr0070948 3 1 1 81 X 6542143 6542221 CTCATCTTTGTGCGGATCC 58 6542264 6542284 TGTCCAGATAGTGGGATAGTG 58 NA Drosophila melanogaster 61 CG3973 FBgn0029881 FBtr0070948 2 1 1 81 X 6542144 6542222 TCATCTTTGTGCGGATCCT 59 6542264 6542285 TTGTCCAGATAGTGGGATAGTG 59 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 2 5 6 86 X 6456185 6456268 GGATAATGTCGAGGAGCCC 59 6456317 6456336 ATAATGACACTGGCTCCCAG 59 NA Drosophila melanogaster 61 CG14446 FBgn0029850 FBtr0070876 3 1 1 85 X 6122197 6122280 CCGATGACAATCACTATCTACAC 58 6122324 6122343 GTAGTTCGTTCCATGCTGAC 59 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953,FBtr0089393 2 2 2 80 X 6005853 6005978 GTCGAAATGTTTATCAAGGTGG 58 6005794 6005812 CATGATATTCCAGCCGGAC 58 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953,FBtr0089393 1 2 2 80 X 6033687 6033706 TCACTCTCGGCATGTATCAG 59 6032276 6033645 TGTCGTCGAAGATCTGAAGG 59 NA Drosophila melanogaster 61 CG15765 FBgn0029814 FBtr0070817 2 1 1 157 X 5728505 5730083 TAGTGACGGTCGACAACAG 59 5730777 5730796 GTAACCAGTATCTGCCACCA 59 NA Drosophila melanogaster 61 Prosbeta2R1 FBgn0029812 FBtr0070816 3 1 1 115 X 5703261 5703279 TACAAGGACGGCGTTATCC 59 5703357 5703447 GCGCCACAACAGTATATGTG 59 NA Drosophila melanogaster 61 cv FBgn0000394 FBtr0070804 3 1 1 88 X 5586121 5586202 CGGTCATTACTTCTTGAGAACC 59 5586251 5586269 TAACCGTGCAGTTTACGGT 59 NA Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0070731 1 1 2 80 X 4697770 4697791 ATTATTGAATTCGTCAGACGGC 59 4697640 4697731 GGAAATTGGATCCGGATATCG 58 NA Drosophila melanogaster 61 CG6978 FBgn0029727 FBtr0070715 1 1 1 60 X 4679439 4679460 CTTCAAGATCAATCATCTGGAC 57 4679481 4679499 GGTTACGGAGATTAGCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fd3F FBgn0061173 FBtr0070602 1 1 1 80 X 3698342 3703461 ACCAATGGATATCCGATCGT 58 3703501 3703522 TCGATAGATTATGTCGAACGGA 59 NA Drosophila melanogaster 61 CG3592 FBgn0029642 FBtr0070551 1 1 1 60 X 2829419 2829437 CTGTTTCTATGCGTGGGTG 58 2829460 2829479 TGAAGTCTCCTAACCACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14416 FBgn0040352 FBtr0070567 3 1 1 229 X 2766818 2766836 TTATTCGCACTTCTCGTCG 58 2766552 2766570 GTAGTTGTGGTCGATGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 1 3 3 106 X 2609222 2609240 GCTCTGTAACTCCTCCGAC 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440 1 1 2 108 X 2486374 2489773 CGATTATGAAATGTCTGACCAGG 59 2489841 2489859 TCCTCTTCAGCTGTTGGTG 59 NA InUTR Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300878,FBtr0300879 2 3 3 203 X 2278537 2278894 ATGTACATGTGATTCGCTGTC 58 2278354 2278372 ATCGCTGATCGAAGTACGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cyp4ae1 FBgn0015036 FBtr0070388 3 1 1 88 X 2074379 2074461 GATTTGGTTATAGATGAGGGCT 57 2074510 2074528 GTGAAGATCGCTTCATCCC 58 NA Drosophila melanogaster 61 CG4406 FBgn0023545 FBtr0070347 1 1 1 80 X 1902788 1902806 ACTCGGAGGAGATAACCAG 57 1902648 1902745 AGAATAGCTCATTGTACCGC 57 NA Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070367 1 1 2 80 X 1762864 1762883 TATTATTAGAGCGCTGTGCA 57 1762731 1762822 GTGGAGATGCTACGTAACTG 58 NA Drosophila melanogaster 61 CG12773 FBgn0024365 FBtr0070235 2 1 1 171 X 1246457 1246475 TATGGCCAAAGTACGACGA 58 1246247 1246322 AAGTACAGGAACGTGGAGG 59 NA Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 3 2 2 88 X 971123 971253 CAATCGAACAGCCATGGAC 59 971053 971072 TATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 TfIIA-S-2 FBgn0040338 FBtr0070184 2 1 1 210 X 905422 905522 GGATGAGATGATGGAGAGGG 59 905231 905249 CAAGGAATGCTGATCCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 1 1 1 130 X 822360 822434 GAAATACTCAAGCTGGCGC 59 822592 822610 AGCTTCATCAGAGACTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 su(s) FBgn0003575 FBtr0070120 2 1 1 89 X 532673 532691 TTTACGTGGGACCATCGAC 59 532742 532822 CATGGTCATCTTCTAATGGGC 58 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578,FBtr0100581,FBtr0100580,FBtr0100577,FBtr0100579,FBtr0100582,FBtr0089442,FBtr0089441 1 8 8 80 X 165370 165390 GAACATGACCGTAGATCTCAC 58 165230 165328 GAAACGGGATATCCTTGGC 58 NA Drosophila melanogaster 61 toy FBgn0019650 FBtr0089185 1 1 1 80 4 1026628 1026704 AAACACAGGTGTCATTTCTGC 59 1026746 1026764 TTGCTTCCCGTTAGGTCAG 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 1 4 4 82 4 596941 597612 TAACGGAAACGATGACCAC 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 2 2 2 91 4 279986 280081 AGATGATCAGAATCCTCGCT 58 280133 280153 GGTCTTCCATAGTAACGTTCC 58 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 1 8 8 166 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158059 TAAACCAATTGCTTGCAGC 57 NA Drosophila melanogaster 61 mir-34 FBgn0064158 FBtr0082178 1 1 1 60 3R 5926684 5926702 GTTAGCTGGTTGTGTAGCC 58 5926726 5926744 GGCAGTGAAGATAGTGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smvt FBgn0039873 FBtr0085860 3 1 1 92 3R 27586673 27586694 GACCTTCATCTTCATATTGACG 57 27586543 27586621 ACATTAAATCCGGTCACCTG 58 NA Drosophila melanogaster 61 CG1896 FBgn0039870 FBtr0085837 3 1 1 108 3R 27570651 27570732 TTGAAATTCGCTCCACATGG 59 27570802 27570821 CCTATCCACTGAGCTGTAGG 59 NA Drosophila melanogaster 61 5-HT7 FBgn0004573 FBtr0085746 3 1 1 90 3R 26841948 26841968 AAACGACTTCGAGAAGAAAGC 59 26797650 26797669 CTATGTGATTGTCGTCGGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 2 4 4 117 3R 26650595 26650683 AGTTCCTATGACTGGTAACCT 58 26650762 26650780 ACCTGAAAGCATCTTGCTG 58 NA Drosophila melanogaster 61 wts FBgn0011739 FBtr0085720 3 1 1 81 3R 26617852 26617938 CATACCAGGTGGTGATCTG 57 26617789 26617807 CTCGGCGATGTAGAATCTG 57 NA Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 2 2 2 86 3R 26520526 26520546 TATAGAGACCTCAAACCGGAG 58 26520392 26520480 TTCCACTTTCTTGGCAAATCC 59 NA Drosophila melanogaster 61 CG34433 FBgn0085462 FBtr0112734 1 1 1 60 3R 26476152 26476170 CACCCGATCTTCCACTACC 59 26476194 26476212 AGAGTATTCCGCAGGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spdo FBgn0260440 FBtr0085651 2 1 1 104 3R 26303806 26303825 CAATGCCACCATTACCTTGG 59 26303892 26303989 AAGGACTTTCCGAGGTGTG 59 NA Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 1 2 2 80 3R 25818490 25818566 GGGAGATTTGACCAATTTGGG 59 25818430 25818450 GGTAGGAGGTTTGAATAGCGA 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085541,FBtr0085540,FBtr0085539 2 3 3 60 3R 25573951 25573969 GATTGCCAACGAGGTTCTG 59 25573909 25573927 GTTGTACACGATCTTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp99b FBgn0039685 FBtr0085462 1 1 1 60 3R 25542239 25542259 GATTCGATGTCCACAAGATCC 58 25542199 25542217 GATTCGTGCACCTCAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gycalpha99B FBgn0013972 FBtr0085453 2 1 1 83 3R 25509285 25509303 GAACGAGGATCTCAACACG 58 25509350 25509428 TCCAGTTTGAGCTTGTGGA 59 NA Drosophila melanogaster 61 CAP-D2 FBgn0039680 FBtr0085452 3 1 1 112 3R 25502981 25502999 GAGGTACTCGAGGAAGAGC 59 25503073 25503153 ATATCGGGAAACTCCGTAAGG 59 NA Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085467 2 1 2 224 3R 25458577 25465963 TTCCAAATCGCAGTGTCAC 58 25458371 25458389 CATCTAGTGCAGGATCGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Rpn2 FBgn0028692 FBtr0085385 3 1 1 99 3R 24981684 24981702 TTCTTCCGTCAGCTGTACG 59 24981762 24982041 CACCAGCATCAATAATACCCTG 59 NA Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 1 3 3 102 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951601 24951619 AGATGAGGCGACTATGCAG 59 NA Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085357 1 1 2 140 3R 24860520 24860597 AAGGAACTGAAGAGGCAGG 59 24860701 24860719 TTTGAACACGGGAATGGTG 58 NA Drosophila melanogaster 61 beta4GalNAcTB FBgn0039625 FBtr0085419 1 1 1 60 3R 24859466 24859485 CAGGTGACCAGAAATGTCTC 58 24859425 24859444 CAATGATCTCCGAGTAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1951 FBgn0039623 FBtr0085342 3 1 1 104 3R 24855146 24855167 CGATTATAAGCCTCATCAAGGA 57 24855230 24855309 CGTCTTTGGGTTTATTGTCTC 57 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 2 3 3 80 3R 23765355 23765434 CCATTACCTTCGAAGGTACTG 58 23765474 23765494 CCTCGATGGAAAGAATTTGGA 58 NA Drosophila melanogaster 61 CG12883 FBgn0039538 FBtr0085216 3 1 1 60 3R 23505142 23505231 GTTCGAGCAAGAACAAGACC 59 23505254 23505272 GTCATGTTACTGCATCCGC 59 NA DesignRelaxed Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 3 5 5 81 3R 23392371 23392392 CTTGCGATTCATTTACGAAACG 59 23392247 23392331 GAATCCGTTGATGATACTGCC 59 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193,FBtr0273192 2 2 2 80 3R 23140132 23140150 TTAATCTGGCCTGCAAGTG 58 23140008 23140091 CATTCAACTCCTTCAGAGTTCC 59 NA Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 1 2 2 80 3R 23069023 23069043 GTCACCAGTTTGGAAGAATCC 59 23068901 23068984 CCGTACTCGGTCTTATAGAACC 59 NA Drosophila melanogaster 61 CG5882 FBgn0039490 FBtr0085109 1 1 1 80 3R 22945077 22945155 CTACTGGATGAAACTTCCAGC 58 22945193 22945215 CTTCATCGTAGAAAGTTCCTTGG 59 NA Drosophila melanogaster 61 CG17192 FBgn0039472 FBtr0085153 2 1 1 85 3R 22843900 22843974 TTAGTAGCGGGTAATGCCC 59 22843833 22843851 TGAAATGTGCCATCCTCCT 59 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 1 2 2 80 3R 22796487 22796506 ATCATGGCCAAACTATTGCA 58 22796543 22796626 CTGATACCACAGTAAGAAGTATCTG 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995,FBtr0084994,FBtr0084999 2 3 6 176 3R 22082744 22082762 CTCACCTTCTCGTACGGTC 59 22081085 22081103 GAACAGGGATCCAGATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6073 FBgn0039417 FBtr0085003 3 1 1 123 3R 22013588 22013607 CCACGATGTGATCCTAAACG 58 22013428 22013502 AGGTAGGTACTGCAGTTCG 58 NA Drosophila melanogaster 61 m2 FBgn0002592 FBtr0084981 2 1 1 60 3R 21842842 21842863 GGAGTTGCTCATTGAAGATGAC 59 21842803 21842823 ACCGTACTTGTGGATAGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 2 2 2 60 3R 21637244 21637264 CAAAGTCTTCGACAAAGATGG 57 21637281 21637304 CATTATCTGACGGAACTCATTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177 1 1 2 80 3R 21601874 21601895 GCCAATCTCTATCCTAAGAAGG 57 21601740 21601835 CGCTGATATCACAAAGAACAG 57 NA Drosophila melanogaster 61 Vps33B FBgn0039335 FBtr0084835 2 1 1 95 3R 21299440 21299515 TCCTGGCTGAAGTTGAAGG 59 21299572 21299592 GATCATGTAGATGTGCACCTG 58 NA Drosophila melanogaster 61 CG11852 FBgn0039297 FBtr0084809 3 1 1 141 3R 21063494 21063569 GAATTTCCCTCCCGAACTG 58 21063674 21063692 CTTGATCAGGAAGGGCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Cad96Ca FBgn0022800 FBtr0084874 2 1 1 82 3R 21027328 21027346 CTGTGAAGACGCTCAAGGA 59 21024683 21027286 CTCCAGAGATTTCATTACCTCCA 59 NA Drosophila melanogaster 61 CG13640 FBgn0039237 FBtr0084730 1 1 1 60 3R 20687630 20687653 CGCATATAATTCCTACTCTTACCC 58 20687593 20687616 TTTGGAGTATGAGTAAGAGGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696,FBtr0084697 1 2 2 89 3R 20620086 20620104 CTTTGACATACCCGCTGTG 58 20620154 20620326 GATGGAAATCTGTAGCAGTACG 59 NA Drosophila melanogaster 61 Pp1alpha-96A FBgn0003134 FBtr0084642 2 1 1 84 3R 20344839 20344857 ACAAGATCAAGTACGCGGA 59 20344904 20345326 TCATAGAACCCGTAGATGCG 59 NA Drosophila melanogaster 61 CG31128 FBgn0051128 FBtr0084638 3 1 1 88 3R 20295416 20295488 AGTACAACGTTACGGGTCC 59 20295540 20295558 TTGGTAGTAGATTCCGGCC 58 NA Drosophila melanogaster 61 Dms FBgn0011581 FBtr0084607 3 1 1 109 3R 20167395 20168560 CTCATCAGCATGTCCTTCG 58 20168633 20168651 GACTGGCATAGAGGTGGAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 p38c FBgn0046322 FBtr0084582 1 1 1 60 3R 19975209 19975230 TGTAAGCCAAATACGATGTCTG 58 19975170 19975188 GGTGATAAACTCCCTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pros26.4 FBgn0015282 FBtr0084520 3 1 1 264 3R 19757071 19757089 GTTCATCAAACGTTCGGCA 59 19756764 19756784 TCCTCCATCATCAGGTAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13601 FBgn0039126 FBtr0084522 3 1 1 80 3R 19753199 19753219 CAACGTGATTAAGTCCAATGC 58 19753084 19753157 CAGTTGTAGAACTGTGCGG 58 NA Drosophila melanogaster 61 CG13597 FBgn0039124 FBtr0084525 1 1 1 169 3R 19718991 19719073 AGCTAATATTAGGAGTTGGGTG 57 19718843 19718861 TAGGATGTTTGTCCTTCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 2 3 3 86 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590549 TTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 CG31413 FBgn0051413 FBtr0084442 2 1 1 60 3R 19528518 19528539 CCAAACGATACTTTATCAGCCT 58 19528560 19528578 GTCCAGCGGAAAGAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 3 1 1 119 3R 19229284 19229355 TACGGCACTCAGACATGAG 59 19229183 19229204 CCACCGTAGATAAATTCTACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34111 FBgn0083947 FBtr0110800 3 1 1 96 3R 19070446 19070464 CAAATGTTCCCGAGTGCTC 59 19068248 19070387 GACTACTTTGTGGAGTGCTC 58 NA Drosophila melanogaster 61 klg FBgn0017590 FBtr0084337 2 1 1 83 3R 18774544 18778734 GAATCTGGGCAATTTCGTCC 59 18778780 18778798 CGCTCATCCCTTGTAACCA 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300008,FBtr0300006 1 3 3 90 3R 17956090 17956108 AAGGGAGATCTACAGTCGG 57 17956159 17956238 CATAGATGGCATTATCACACTG 57 NA Drosophila melanogaster 61 CG5791 FBgn0040582 FBtr0084180 2 1 1 176 3R 17913074 17913161 TCTGACTTGTCCCAATCCG 59 17913301 17913319 CATCTGCCATTGACGATGG 59 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 1 2 2 80 3R 17585997 17586015 ATGTGGCGAAATCTCATGG 58 17586056 17586200 TGTATTGGTCAAGTGGTATTGC 59 NA Drosophila melanogaster 61 CG31343 FBgn0051343 FBtr0084126 1 1 1 90 3R 17574330 17574418 AAAGACGAGGCTTAACGCT 59 17574472 17574490 TCTGGAGTCAATGGTGGTG 59 NA Drosophila melanogaster 61 NELF-A FBgn0038872 FBtr0084051 2 1 1 81 3R 17054077 17054159 TCTCTATCGAACGAACACGT 59 17054203 17054221 TAAGGGCTTTGTCAGGTCG 59 NA Drosophila melanogaster 61 CG5871 FBgn0038870 FBtr0084050 2 1 1 80 3R 17045108 17045126 AAAGGACGACTACAAGCAC 57 17045170 17045240 GCAATGAGACTGGAAAGGT 57 NA Drosophila melanogaster 61 CG31189 FBgn0051189 FBtr0300817 2 1 1 102 3R 16870995 16871013 TTACCCTGACCATCAAGGC 59 16870854 16870933 CATATGATCCATCGATCCAAGTC 59 NA Drosophila melanogaster 61 Dhc93AB FBgn0013812 FBtr0273236 1 1 1 80 3R 16865387 16865464 GGCATTACAGCATGAGATCAC 59 16865327 16865345 CCCAGTTTCACCATGAGGA 59 NA Drosophila melanogaster 61 Rlip FBgn0026056 FBtr0084002 3 1 1 96 3R 16843585 16843671 AGGAGAGCGACTTTAGTGAG 59 16843730 16843748 TATCCTCGATCCTTGCCCT 59 NA Drosophila melanogaster 61 Synd FBgn0053094 FBtr0083966 3 1 1 81 3R 16661036 16661600 GATCGAGGATGGTTACAAACTC 59 16661641 16661660 TTTCGCATATCCCTTCTCGA 59 NA Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0110823 1 1 2 88 3R 16646430 16646448 CTTCAAGATGCACGACTCG 59 16645205 16646378 CACTATCCTTGACGTGCCA 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0300802 2 1 2 84 3R 16405906 16405982 AATTCGAACTTTATCCTGCGC 59 16406028 16406046 CACATCGCTTGAACGTCAG 59 NA Drosophila melanogaster 61 CG17199 FBgn0038775 FBtr0083874 3 1 1 60 3R 16035346 16035364 ATCAAACGCCAAACAGCTC 59 16035304 16035324 ATACTGGACTCTTTGACTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4686 FBgn0038739 FBtr0083816 3 1 1 143 3R 15690887 15690905 GTACGTCCTGAAGGACGTC 59 15691012 15692146 AAAGTGCCAGTGAATACGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6255 FBgn0038708 FBtr0083769 1 1 1 60 3R 15288547 15288566 GTTCTAGTCCAGGGATTCAC 57 15288506 15288524 ACTTTATGGACTCCTCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 1 2 2 86 3R 14967735 14967822 ATACAAGCACAAGCTGGTC 58 14967667 14967685 AGCTCGTAGGAATCTGTGG 58 NA Drosophila melanogaster 61 P5cr FBgn0015781 FBtr0083713 3 1 1 80 3R 14855600 14855619 GGGATGAAGTCTGTTCTCCC 59 14855659 14855741 TTAAAGTAGACCTGAGGTTCCC 59 NA Drosophila melanogaster 61 CG14285 FBgn0038674 FBtr0083711 3 1 1 67 3R 14850951 14851027 AAATACGAATCTGGTCACCG 58 14851056 14851075 GTATATGTACGCCTCGTGAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG7691 FBgn0038626 FBtr0083631 1 1 1 83 3R 14386742 14386838 TCGGATAGGTCCAATCTGC 59 14386885 14386903 ATACTTGCCACACTGTCCA 59 NA Drosophila melanogaster 61 CG7357 FBgn0038551 FBtr0083524 1 1 1 80 3R 13633697 13633772 ACCGGATGTCCATATCTGC 59 13633635 13633654 TACTTTGTGGAGTAGTGCCG 59 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0083502 3 1 2 95 3R 13437189 13437207 TTATCGCAATGGCTCTGGT 59 13437049 13437067 TGCTACCTTCGGTCTTCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34035 FBgn0054035 FBtr0100090 2 1 1 80 3R 13238976 13239055 CAGATTATGAGTTGACCATCAC 57 13239096 13239114 TGGGTTGATAAACTGCAGG 57 NA Drosophila melanogaster 61 CG34280 FBgn0085309 FBtr0112476 3 1 1 194 3R 13229268 13229289 CTGTACCTATAGGAATCCTTGC 57 13229024 13229042 TTTCGCCCTGTCAATTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853,FBtr0302852,FBtr0300053,FBtr0300361 1 4 4 80 3R 13044361 13044437 TCGTTAAGCCAGGTTTCTG 57 13044299 13044318 CATAAATGTGTAGGTGACGC 57 NA Drosophila melanogaster 61 CG5246 FBgn0038484 FBtr0083405 1 1 1 60 3R 12962303 12962322 ATGACATAGCGTTGATCCAC 58 12962345 12962363 ATAGGTTGAGTCAGGTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cal1 FBgn0038478 FBtr0083400 3 1 1 72 3R 12914166 12914184 GTCTACGAGCGCTCTAAGG 59 12914276 12914295 CTATTTCCATGCCGTCTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Irc FBgn0038465 FBtr0083371 2 1 1 80 3R 12830511 12830596 CGGTTTCTATCAGATGTTTCCC 59 12830632 12830655 TCATACAGCTCCTTACTAATGGAC 59 NA Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110962 3 1 2 187 3R 12298435 12298453 CTACAGCATCCTCCTCGTG 59 12299206 12299225 TTGTCCGGATAGATCTGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14882 FBgn0038429 FBtr0083289 3 1 1 61 3R 12269078 12269096 GTGTTTCACGGACGAAGAG 58 12269169 12269189 TATCGCAGCATTTAAGTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 3 1 1 82 3R 12149495 12149514 ACTGTTGGTTTGTAGGTGTC 58 12149557 12149650 AACATAGTAGACCAGCTTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mat89Bb FBgn0020407 FBtr0083259 2 1 1 101 3R 12091638 12091722 GGAGCAAGACTAAAGCTTTCC 59 12091784 12091803 TTTATGGTGCATTGTGGTGG 59 NA Drosophila melanogaster 61 CG32855 FBgn0052855 FBtr0083234 1 1 1 60 3R 11906041 11906059 TGCTTCAAAGCTTTGACCA 58 11905999 11906023 GCTAATATAATTCCCTCCAAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10185 FBgn0038397 FBtr0083235 1 1 1 80 3R 11891832 11891946 TTAACGCACAGAAATACACGG 59 11891772 11891792 AATGATTCAGGTACTCCTCGT 58 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 1 4 4 80 3R 11217401 11217419 CGATGAGTCCAAATCCCGA 59 11217458 11218031 CCTTATCACCAAATACCTTGATCG 59 NA Drosophila melanogaster 61 CG6136 FBgn0038332 FBtr0083108 2 1 1 60 3R 11197511 11197529 AGAGAAATGTCCAACCACG 57 11197469 11197487 AAGCCGATCGTATGGAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 3 1 1 114 3R 11165160 11165179 TATTTCAGGAACCGGATCCA 58 11164873 11165083 ATACGAGATGTACCAGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3837 FBgn0038279 FBtr0083004 1 1 1 80 3R 10747010 10747099 TTTATGTTTCGCGCAATCAC 58 10747141 10747160 TCTTTATGGACAACAGGTGC 58 NA Drosophila melanogaster 61 eff FBgn0011217 FBtr0083018 3 1 1 151 3R 10560129 10563151 GGAGATGATTTATTTCACTGGC 57 10559496 10559514 TTTGGATGGTATATGCGCG 58 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 1 3 3 89 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551644 10551774 GATGTTGATCGTCTCATTGGTC 59 NA Drosophila melanogaster 61 CG3505 FBgn0038250 FBtr0082966 2 1 1 94 3R 10483465 10483483 TGCTATCCGGCAATCTCAG 59 10483540 10483996 ACTAGGACAGCATACCTGGA 59 NA Drosophila melanogaster 61 Pde6 FBgn0038237 FBtr0300330 1 1 1 83 3R 10343871 10343889 ATCAGACGGAGAAGCTCAC 59 10343750 10343825 GCTCAAAGTCCGTAAAGGTG 59 NA Drosophila melanogaster 61 CG42500 FBgn0260226 FBtr0300627 3 1 1 150 3R 9978180 9978198 ATGTTCCTGTAGGACACGG 59 9978048 9978067 CCAGAATGACCATGAACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or88a FBgn0038203 FBtr0082890 2 1 1 90 3R 9936361 9936379 CTCTGGACGCAATATTGCC 59 9936430 9936507 GCTGCATTATTTCAGTGAAGTG 58 NA Drosophila melanogaster 61 CG9920 FBgn0038200 FBtr0082917 2 1 1 260 3R 9923622 9923716 CACAAACAAGAAACGATGTCC 58 9923382 9923400 ATCGACCTTAGTTCCACCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9922 FBgn0038196 FBtr0082870 1 1 1 100 3R 9861613 9861631 CAACGGCAGAGAAGAAGTG 58 9861390 9861549 TCACACGTTCCAAATCTGC 58 NA Drosophila melanogaster 61 CG31495 FBgn0051495 FBtr0082882 2 1 1 60 3R 9665165 9665184 ATCCGAATGATCTCCTGTCC 59 9665124 9665142 TTACCTTCGACCAGATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adgf-C FBgn0038173 FBtr0082821 1 1 1 80 3R 9534092 9534162 TCAAGAAGTTGCACCAAGC 59 9534206 9534224 AGAGTGGCTTTCCCTTGTC 59 NA Drosophila melanogaster 61 Task6 FBgn0038165 FBtr0301654 2 1 1 80 3R 9496547 9496641 TTAACCACTATAGGCTTTGGC 58 9496487 9496505 GAACATCACGTATTCGGGC 59 NA Drosophila melanogaster 61 yellow-e2 FBgn0038151 FBtr0302576 2 1 1 129 3R 9232074 9232348 ATTATCCACCTAATGGCGG 57 9231963 9231981 GGATAGGCCTGGATTTCAC 57 NA Drosophila melanogaster 61 CG34309 FBgn0259831 FBtr0112505 2 1 1 123 3R 9198394 9198412 CCAACAAGTTACGGTGGAC 58 9198608 9198626 CAGATGTCCAGGTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6359 FBgn0038065 FBtr0082641 3 1 1 132 3R 8454696 8454952 GGGATAGCAAGATTGTGGTG 58 8455047 8455065 TTGATGAAGGCCTCCAGTC 59 NA Drosophila melanogaster 61 CG5509 FBgn0038054 FBtr0082633 3 1 1 60 3R 8278419 8278440 ATCCATAACATTGGCTGAAGTG 59 8278461 8278479 TTCCACTGAACCCGTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0100410,FBtr0082607 1 2 2 60 3R 8193939 8193957 TACTACCCACAGGTGTTCG 58 8193897 8193915 CCTCGATCTTCTTGAAGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18765 FBgn0042110 FBtr0113346 1 1 1 113 3R 7517414 7517433 AGCAGATATCAGAGTTCCGA 58 7517262 7517338 GTTTCTTGTTGTCTGCCAC 57 NA Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 3 1 1 236 3R 7500144 7500225 CTACAGAGGAGCACTGCAG 59 7500425 7500443 AACTCCGTATCGAAGACGA 58 NA DesignNoJunction Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082453,FBtr0082454 2 2 6 106 3R 7418335 7419052 ATTTCATTGGTGATGCACCAC 59 7418249 7418267 CTTCATGTGGTTCTTGCCG 59 NA Drosophila melanogaster 61 CG14709 FBgn0025701 FBtr0302027 2 1 1 80 3R 7399570 7399656 CTTCTTATCGTACTGGGTGG 57 7399696 7399717 GCAAAGTAATACATATCCTGCG 57 NA Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 2 2 2 100 3R 7059034 7059132 GAGAATCGCATTAAAGTGATGC 58 7058955 7058973 TTCAGAGTGCTCTCCAGTG 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 2 5 5 127 3R 7047972 7047990 GGTAAGGTTAAGGCCTTCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 1 2 2 124 3R 7041511 7041529 AAGCTGTACAAGGAAGTGC 58 7041337 7041423 TTGATCAGACCCTTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 Ugt86Dg FBgn0040253 FBtr0082377 2 1 1 63 3R 6991572 6991592 GACATTTATGTTCCGGAAGTG 57 6991341 6991360 GATCAAACTGAGCCTTTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 3 2 2 80 3R 6819256 6819277 TCCTAATATGCCTGATCATGGG 59 6819316 6837744 TTTCACCATCTGGCTTAAAGC 59 NA Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082330 1 1 2 133 3R 6714055 6714802 AAACCAAGCTCAAGGAGAG 57 6713940 6713958 ACATCCATGGTTCTTGCAG 58 NA InUTR Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 1 2 2 84 3R 6706821 6707298 GGAGCATGATACTTAAATGCCA 59 6706758 6706776 TTCGTGTGCGTATGTTTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14687 FBgn0037835 FBtr0082280 1 1 1 65 3R 6618817 6618835 CATTAAGATTCAGGCCGGA 57 6618864 6618882 TTCTTGCTGGATCGATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 1 1 4 80 3R 6598880 6602914 TTCCTACGCAGTTACGTACC 59 6598289 6598308 GAGTAGCTCGAGTAGATGGG 58 NA Drosophila melanogaster 61 CG4073 FBgn0037827 FBtr0082269 2 1 1 60 3R 6541421 6541439 GATCGCACCGAATATGTCC 58 6541458 6541481 GAATCATATAGACGAACAGCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31373 FBgn0051373 FBtr0082318 2 1 1 107 3R 6534854 6534874 GCTGCGTATTATCGTTATGGA 58 6534610 6534785 TTAATGAAGACGGCCAAGG 57 NA Drosophila melanogaster 61 CG8516 FBgn0037757 FBtr0082141 1 1 1 80 3R 5620267 5620287 CAAGATCTTCCCTACATGACG 58 5620329 5620401 TGTGTATCCCTTCGACGAG 58 NA Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583,FBtr0082134 2 2 2 82 3R 5593799 5593817 GTTCTGTTCACTTCGTCGT 58 5594645 5594663 CATTGAATGGAGGAAGCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12948 FBgn0037739 FBtr0082167 3 1 1 175 3R 5572704 5572781 TTCCAATGCCGCATTAAGC 59 5572547 5572568 GCATTTAAATGTACGGCTACGT 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082095,FBtr0082094,FBtr0082097 3 4 4 80 3R 5514564 5514810 CAAATTGAGATACGAATCGCC 57 5514504 5514522 ATCTCGTCCTCGTAGAAGG 58 NA Nonspecific Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 3 3 3 102 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830325 TTTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 CG9793 FBgn0037620 FBtr0081948 2 1 1 86 3R 4555195 4555272 TGGAGCTGTGTTAAAGAACTG 58 4555129 4555150 CTAAAGGATATGGCTTGTTGCA 59 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 2 3 3 138 3R 4499022 4499108 ATCACTACCAGCAAGGAGG 58 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 1 2 2 131 3R 4445732 4446035 TACTCCAAGAATCACGCCT 58 4446130 4446148 GGTCAGGCAATATGTCAGC 58 NA Drosophila melanogaster 61 Sfp84E FBgn0259974 FBtr0300322 1 1 1 87 3R 3805950 3806020 TTAAGATGCGTCACTTTACCG 58 3805883 3805901 TTGAGAGCTGTCCTGTGAG 59 NA InUTR Drosophila melanogaster 61 CG10086 FBgn0037517 FBtr0081744 3 1 1 105 3R 3618427 3618606 TTCGTACCAGATTTACCTCCTC 59 3618672 3618690 GAGTAAATCGGGAGGCCTC 59 NA Drosophila melanogaster 61 CG14609 FBgn0037483 FBtr0081573 2 1 1 81 3R 3028032 3028113 TTATCCACGAATGAAGAGCC 57 3028155 3028175 CATTTCATGAGCCAACATGTC 58 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081636 3 1 3 182 3R 2902551 2902623 AGTCTAGGTCACTGAAACCA 58 2902768 2902786 TGTTGGTTGTACTTGGCAC 58 NA InUTR Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081664 1 1 5 243 3R 2582671 2584836 TCGATTTGATCTTGGAGCCT 59 2582447 2582468 GGATTATACGCTTGCATTATCG 57 NA DesignRelaxed Drosophila melanogaster 61 Ccp84Aa FBgn0004783 FBtr0081691 2 1 1 193 3R 2529873 2529947 CATTCAAGTTTGTCTTCGCC 58 2530103 2530121 GTAGGAGAAGCGGTACTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1137 FBgn0037454 FBtr0081705 3 1 1 204 3R 2385616 2385879 CCAGCATGAATTTGCAACC 58 2385430 2385448 AATGAACTCCCTTCGACGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG1024 FBgn0027514 FBtr0290212 1 1 1 80 3R 2205787 2205807 TTTACATATGTCCGGAATGCG 58 2205664 2205748 GATAGTCGTGTTTCGTGTTCAG 59 NA Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604 3 1 2 140 3R 2114159 2114177 CTGAGAAGCGTGATTAGCG 58 2114919 2114937 TTGAAAGCGACCTTGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 Osi11 FBgn0037418 FBtr0078614 1 1 1 60 3R 2094273 2094291 GCGTCATATCTATGGGCAG 58 2094231 2094249 CTGTATCTTGCAGCACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0078621,FBtr0273439 1 2 2 80 3R 1881010 1881137 ATACCCGAATCCTATACGCC 59 1880949 1880967 GACGCACTATCATGTCCAC 58 NA Drosophila melanogaster 61 CG10280 FBgn0037395 FBtr0078648 3 1 1 158 3R 1837092 1837399 GTGGCGGAAGATGAATACG 58 1836952 1836970 ATGCCTCATTGGATTGACG 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 3 4 4 134 3R 1643901 1643980 GTCAACATGGACACAACGA 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 3 2 2 122 3R 1605223 1605526 GCACATATCAAATTAGCCTGC 58 1605610 1605628 AGATATCCAGGTGGTCCAG 57 NA Drosophila melanogaster 61 asl FBgn0261004 FBtr0078743 3 1 1 82 3R 1432100 1432121 CATAAATTCTACACTGGACCGG 59 1431983 1432058 TAATCCGTCCAAGCTCTTCC 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 2 3 3 80 3R 1392111 1392200 TTACCTTCTTCAAGTTGGAGAC 58 1392240 1392259 TTGGGTTCTTGTATAGCCAC 57 NA Drosophila melanogaster 61 ksr FBgn0015402 FBtr0078766 3 1 1 60 3R 1306911 1306929 GGCAAGGTGATTATCACGG 58 1306869 1306889 TATCACAGTAGAGCAGCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 3 2 2 110 3R 1294735 1294808 GCTAGTTCGGTCTACTGGT 58 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 1 2 2 88 3R 1227159 1227241 TACTGGACTATGTGCACTGC 59 1227090 1227108 GAAGTCGCAATCGATACCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 3 2 2 124 3R 1185797 1185815 CTCCCGTTACAGTCATCTG 57 1185263 1185710 GCAAATTGCGAATATCACCA 57 NA Drosophila melanogaster 61 opa FBgn0003002 FBtr0078836 2 1 1 69 3R 693991 694010 ATAAGTCCTACACGCATCCC 59 694182 694200 CTCTTCTCGTCCACATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 hkb FBgn0261434 FBtr0078951 1 1 1 139 3R 171666 171684 AGTTAAAGGCGCTCAACAG 58 171480 171498 CACGTCGCACTTAAATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 3 3 3 90 3L 23741463 23741536 CCCAGTTAAAGACTAGTAAATGGG 59 23741584 23741603 TCGTCTACTTGTACCAAGCA 58 NA Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 1 1 1 70 3L 22641079 22641150 TTGTCATAAAGCAGAGCGG 58 22641181 22641202 GAAAGTCGATCTGTTGTATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7470 FBgn0037146 FBtr0078477 3 1 1 81 3L 21969815 21969894 TAGCAAAGAGTTTGACGGC 58 21969938 21969957 GTCGTAGAGGGACATCAGAC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0111017,FBtr0078468,FBtr0301364,FBtr0078470 1 5 5 80 3L 21907919 21907998 GATTTCGTGAAGAGTCTGGT 57 21908041 21908059 TTGTACCAGACACAGTCAC 57 NA Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450,FBtr0078451 3 2 2 244 3L 21739981 21739999 TACCAGAGGGAGTTCTCCT 58 21739703 21739774 TCCATGTCCAGTTCAATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11249 FBgn0037115 FBtr0078429 3 1 1 87 3L 21665742 21666031 TCAAACACCATCTATTGGGC 58 21666081 21666099 TTTACGATCAGGCTCTGGT 58 NA Drosophila melanogaster 61 CG11306 FBgn0037108 FBtr0078422 2 1 1 80 3L 21620492 21620574 TTCTCAAGAATGTACAAGTGGG 58 21620612 21620633 CAGAATATGATTCTCGGTCCAC 58 NA Drosophila melanogaster 61 CG12971 FBgn0037078 FBtr0078402 1 1 1 80 3L 21349323 21349583 GGCTTAAAGCGAAGGTCTC 58 21349261 21349279 GTGAAGCGTCTGATGTTGG 59 NA Drosophila melanogaster 61 CG10566 FBgn0037050 FBtr0078292 3 1 1 81 3L 21125723 21125742 AAGGATCCACAGAGGAAGTG 59 21125785 21125865 TTGTCCTGGTACTCGTTAGC 59 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288,FBtr0301579 2 2 2 232 3L 21025965 21025983 TAGTATTCTCGCGGAGCAC 59 21026243 21026261 TTACCTGAGCTCGGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 3 4 4 82 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508473 20508551 TCAACCATAGCCCGAATCC 59 NA Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078200 2 1 2 80 3L 20468581 20468670 TCGTAGGAAGAACACAGATATCC 59 20468706 20468728 TATCGGATAGATTGCTGTACTCC 59 NA Drosophila melanogaster 61 CG5847 FBgn0036985 FBtr0078191 3 1 1 113 3L 20410681 20410759 AAGTGCAACTACGTGAAGG 58 20410836 20410854 GATGTTCTCGATTGAGGCG 58 NA Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 2 2 2 80 3L 20237607 20237625 TGAGTTTGTCTGGAACTCG 57 20237666 20238047 ATATGCCCACCTGTATAATGAG 57 NA Drosophila melanogaster 61 CG14185 FBgn0036936 FBtr0074818 3 1 1 92 3L 20099532 20099550 GACACTGGACGAGCTACTG 59 20099671 20099691 CTGACTGTGTAAGAGATCACG 58 NA DesignNoJunction Drosophila melanogaster 61 schuy FBgn0036925 FBtr0074899 3 1 1 208 3L 19979620 19979639 GAATAGACCTTCGTTCGTGG 58 19979808 19979891 CAGTGTTACCTTTCTGGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32219 FBgn0052219 FBtr0074914 2 1 1 141 3L 19944028 19944113 TCATAATCATTCGGCTGTCG 58 19943906 19943924 ACTTTCCTCATCCGATGCA 59 NA Drosophila melanogaster 61 CG42638 FBgn0261361 FBtr0302283 1 1 1 60 3L 19742219 19742237 TCCGTACAAGTTCGTTGTG 58 19741476 19741494 AAGGCACAATTGCATCGTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 l(3)76BDm FBgn0260655 FBtr0074966 3 1 1 81 3L 19607674 19607695 GAACGGAAGTGTACATCAACTC 59 19607484 19607638 CTGTTCATTATGTGTAACCTATCGG 59 NA Drosophila melanogaster 61 CG9451 FBgn0036876 FBtr0074979 3 1 1 84 3L 19492780 19492798 TCCAGTGAGCACTTATCCC 58 19492650 19492733 TTTAGCACCATTGGTGAGTG 58 NA Drosophila melanogaster 61 CG3797 FBgn0036842 FBtr0075037 2 1 1 165 3L 19055234 19055252 TGTGATGGAAAGGTTCACC 57 19055020 19055105 ATAGTAGAAGGCCAAGCCT 57 NA Drosophila melanogaster 61 MED11 FBgn0036811 FBtr0075054 1 1 1 152 3L 18739054 18739072 ATCCTGTGCATGCAAAGTG 59 18739241 18739261 CTGGGTCAAGTAGTTGATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Chmp1 FBgn0036805 FBtr0075092 2 1 1 139 3L 18676982 18677000 TGTCTACGAGTTCCATGGA 57 18676790 18676809 CATGTTGCCCTTCTGAATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34254 FBgn0085283 FBtr0112448 2 1 1 90 3L 18673554 18673573 ATCTTTAAGTTCGATGGCGA 57 18673626 18673697 CAAGGACTAGATGGCACTC 57 NA Drosophila melanogaster 61 GNBP1 FBgn0040323 FBtr0075050 2 1 1 80 3L 18670117 18670137 AACCTTTGCCTTTCAATACGG 59 18670175 18670261 AGTAGTAGGAGTGGTACTATCCA 59 NA Drosophila melanogaster 61 MYPT-75D FBgn0036801 FBtr0075049 3 1 1 116 3L 18657813 18657831 TCATTCTCACCGAGAAGGG 58 18657911 18658806 TATTGGTGTCCACGAGGAC 59 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566,FBtr0100567,FBtr0075111 2 3 3 60 3L 18594290 18594371 GGGACTTGGTCACTATTTCG 58 18594249 18594267 GGGATTGATTGAGAGCAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4306 FBgn0036787 FBtr0075117 2 1 1 87 3L 18455629 18455826 ATAGACAGTCAAGAAGGCGT 58 18455561 18455581 CAGGAGTTGATTCAGATTCCC 58 NA Drosophila melanogaster 61 CG13700 FBgn0036785 FBtr0299605 1 1 1 80 3L 18293870 18293948 ATGAGCGTTCGTTACTCAG 57 18293808 18293826 GTCTCGGTAGTCCATTGTC 57 NA Drosophila melanogaster 61 CG7320 FBgn0036782 FBtr0075128 2 1 1 119 3L 18194853 18194934 AACAGTATGTGGTCTACAACGA 59 18195013 18195032 GCATCTGCCGATAATGATCG 59 NA Drosophila melanogaster 61 Prestin FBgn0036770 FBtr0075153 3 1 1 82 3L 17894111 17894130 TACTCTAAATGCGGATCCCA 58 17893992 17894070 CCATTAGGAGGTTTACAATTCCC 59 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 2 2 2 129 3L 17503755 17503773 CCCTGTCCCATCATCTACG 59 17503862 17504022 CCGTGATTCCTAGGAAATATTGC 59 NA Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0302510 1 1 3 80 3L 17467922 17468031 TATTACGGCAAAGGTTCAAGTC 59 17468072 17468090 GGACAGAAGCTAAGTGCAG 58 NA InUTR Drosophila melanogaster 61 CG3764 FBgn0036684 FBtr0075297 2 1 1 80 3L 16991668 16991689 CTATGCTTAGTCGATTGAGAGC 58 16991542 16991627 AGGCCTGGAACATGATCTG 59 NA Drosophila melanogaster 61 CG13027 FBgn0036681 FBtr0113177 3 1 1 82 3L 16937688 16937767 AACAAGTTGGTTAATGAGGCC 59 16937811 16937829 GAGTCATCGTTCGGATCGA 59 NA Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 1 2 2 134 3L 16777688 16777706 ACACATTGTGCAATCTGGG 58 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0075350,FBtr0100145 1 2 2 99 3L 16674040 16674348 AATTTACACAGGTGGCCGA 59 16673959 16673977 GCCTTCTTCTCCAGATCCC 59 NA Drosophila melanogaster 61 Cpr72Ec FBgn0036619 FBtr0075424 1 1 1 60 3L 16359791 16359809 AGAGAAGCAGGAAATCCGA 58 16359749 16359768 CTCCTGTCTCAGATCTTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr72Ea FBgn0036617 FBtr0075382 2 1 1 60 3L 16355763 16355782 TTCTGCTGTTAGGAAGCCTC 59 16355802 16355823 TACGCATAGGGATAGTACAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 1 1 1 116 3L 16225422 16225496 ATTAACAGCTTGGTGACCG 58 16225575 16225594 CTGAGGATTCTTGTCTTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG17026 FBgn0036550 FBtr0075513 1 1 1 95 3L 15969058 15969076 ATACGAGGTTTGCTTGCTG 58 15969135 15969210 TATGCCAGGAGTCTTCTGG 58 NA Drosophila melanogaster 61 CG7272 FBgn0036501 FBtr0075548 2 1 1 74 3L 15496329 15496412 ATACTGTGATGGTGCTGCA 59 15496446 15496468 GATAAATAGCGAACATGGAGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6888 FBgn0036490 FBtr0075644 2 1 1 60 3L 15201079 15201097 GGTATCCGGTGGTTATCGT 59 15201121 15201139 CAACAGGACGTATCTGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075650 1 1 2 185 3L 15132621 15134452 AGATTAGTGTGCATGACGC 58 15132454 15132472 GGAAGAACTTCAGAGTGGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14113 FBgn0040814 FBtr0075837 3 1 1 97 3L 13322327 13322399 GAAGAAGAGGTATACACGGAG 57 13322457 13322476 TATCTGAGTGCATACTGCAG 57 NA Drosophila melanogaster 61 CG42481 FBgn0259971 FBtr0300315 2 1 1 107 3L 13292082 13292100 TCTGTTGGTCATCCTCTGC 59 13291993 13292012 TAGCATGGCTCGTTATAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 viaf FBgn0036237 FBtr0076062 1 1 1 142 3L 11986246 11986264 GGTCATGAGTCACTTCGTG 58 11985953 11986141 GTATCTTCGTTTGGGTCCTG 58 NA InUTR Drosophila melanogaster 61 Muc68E FBgn0053265 FBtr0076063 1 1 1 60 3L 11961287 11961307 TACCACGAGTAGTCCAATTCC 59 11961247 11961267 ACTTGATGAGGGTTCTAAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14131 FBgn0036205 FBtr0076028 2 1 1 82 3L 11770594 11771324 TTCGAATCGCAGGTTAACG 58 11771369 11771388 CATGGGCTTTCGAATTCCTC 59 NA Drosophila melanogaster 61 CG14137 FBgn0036178 FBtr0076144 3 1 1 70 3L 11592813 11592831 ACAGCCTACTACAGAAGGC 58 11592761 11592779 ATGTTCGGGAGTACGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chrb FBgn0036165 FBtr0076093 3 1 1 100 3L 11487746 11487764 GATCATCCGGATGTCGGAG 59 11487828 11487959 AGTATGCAATGCGCTTGAC 59 NA Nonspecific Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359 1 1 2 113 3L 11466396 11466414 GACGAGCAAACGAATTGCA 59 11466540 11466558 AAAGAAGAACGAGTACGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ufd1-like FBgn0036136 FBtr0076223 1 1 1 92 3L 11115951 11116029 CGGAAAGATTATTATGCCTCCC 59 11115880 11115898 TTCTTGACGTTGGTCAGCT 59 NA Drosophila melanogaster 61 CG14147 FBgn0036112 FBtr0076194 3 1 1 96 3L 10965835 10965923 AGAATGAAGTTCTTCGTGTGC 59 10965981 10965999 GGTGGTAACCATGATGGCT 59 NA InUTR Drosophila melanogaster 61 Gem3 FBgn0011802 FBtr0076292 3 1 1 108 3L 10455967 10455985 CCAACGAAGATTCAGGCAG 58 10455819 10455842 CGACGGCTATAACATAGATTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 3 2 2 80 3L 9887378 9887457 TTGATTTGCCCATGATCCG 58 9887316 9887334 CATTGGGATGATAGCTCCG 57 NA Nonspecific Drosophila melanogaster 61 CG3222 FBgn0036014 FBtr0076379 2 1 1 60 3L 9592630 9592651 TGTTCAATAGTAAGACCTGCTG 58 9592671 9592690 TACATGAATTGATGGAGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32036 FBgn0052036 FBtr0114525 1 1 1 90 3L 9481736 9482170 TCGAAGTTCAGAAATTCGGA 57 9481665 9481685 GGTATCTTGTTCAAGTCTTGC 57 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113322 3 1 5 96 3L 9424348 9424366 AACTGTGATAACGACCAGG 57 9424426 9427009 CATCCACATAGCTCGTCTC 57 NA Drosophila melanogaster 61 CG13315 FBgn0040827 FBtr0076530 1 1 1 70 3L 9090234 9090252 AACAAGCTGCAGAACTTCG 59 9090286 9090304 CTGCGATCATAGTTCTGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5280 FBgn0035952 FBtr0076552 2 1 1 195 3L 8983197 8983215 AACAACGTGCAGATCAAGG 58 8982912 8983038 TGACAAGCAATCGGATCAG 57 NA Drosophila melanogaster 61 CG32024 FBgn0052024 FBtr0076580 3 1 1 102 3L 8801203 8801223 ATCCCAATGATTTAAGCTGCC 59 8801345 8801369 CTGAAGTATGGTTTACTTGAAGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6511 FBgn0035923 FBtr0076570 2 1 1 90 3L 8717533 8717602 CAATGAGAGTGCCATAACCT 57 8717653 8717673 AGTATCCAGACAATCTTTGGC 58 NA Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 3 2 2 81 3L 8372406 8372961 CTGTTTGTCATCCCAGCTC 58 8373006 8373024 CAGACAACTGCTATTGGCC 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076671 1 1 9 87 3L 8351170 8351188 TATCGCCTGTGCTTAGGAC 59 8351021 8351119 TACCACACTTGAGTGCTCG 59 NA InUTR Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 2 1 1 86 3L 8322330 8322349 ATCAGCCTGAAGTTACACCC 59 8322398 8322467 AGGAATATGTGTTGGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7366 FBgn0035855 FBtr0076721 2 1 1 60 3L 8195190 8195208 CAAACCCTTCACCGAACTG 59 8195148 8195168 GTACTCGTTCAGCAAATCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 1 2 2 145 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327861 7327879 GAAGTTGCCGTAGATGTGG 58 NA InUTR Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 3 2 4 86 3L 7059751 7059771 CACATCAATCTCAAGGATCGG 58 7059819 7059971 TAATCAGTCAGCCACTCCC 58 NA InUTR Drosophila melanogaster 61 CG8641 FBgn0035733 FBtr0076931 2 1 1 223 3L 7055136 7055467 GTTATGCTCGGCTCATCAC 58 7054119 7054137 ACGAGGATGAAGAGATCCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10063 FBgn0035727 FBtr0076935 2 1 1 166 3L 6965323 6965403 TCACAGCGTGGAACTACTC 59 6965175 6965193 CAAGGTGGATGGAAACCCT 59 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 2 2 2 80 3L 6540630 6540648 TAAATGCCTCGGAAAGTCC 57 6540691 6541795 AGATAGTATCGCTGCAACAG 57 NA Drosophila melanogaster 61 ImpL3 FBgn0001258 FBtr0077008 1 1 1 61 3L 6253529 6253616 AAGCTGGTAGAGTACAGTCC 58 6253487 6253505 ATGATGTCCACGGGATTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cpr65Au FBgn0042119 FBtr0077060 1 1 1 95 3L 6124694 6125055 TCCTTTGCCTATGAGACGAG 59 6124618 6124636 CTGGACAGACAAGGAACCA 59 NA Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299610 1 1 2 80 3L 6062983 6063332 TACATATTGGTTCTCGAGTACG 57 6063372 6063391 TCCAGTGAAGAAGATAGCGA 58 NA Drosophila melanogaster 61 CG32412 FBgn0052412 FBtr0077080 3 1 1 82 3L 5894648 5894905 GGGACTTATGCTCATATTCTTCG 59 5894588 5894610 GATGCTTTGATCCGTATACAGAG 59 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 2 4 4 64 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775806 5775824 ACCATATGCCATGACCCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112711,FBtr0112714,FBtr0112709,FBtr0112710,FBtr0112713 1 7 8 80 3L 5727702 5728838 ATGTGAAGCACCTAAACAACC 59 5728880 5728898 TGATCTCGGCATTGGACAG 59 NA Drosophila melanogaster 61 Eaf6 FBgn0035624 FBtr0077126 1 1 1 88 3L 5600776 5600917 CTATATGCAATCCTGAGCGC 59 5600707 5600730 GGTGTTCTGATTGATTGAGATCTG 59 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 1 2 2 138 3L 5358154 5358172 TTTCCGCTTACTGGAGGAG 59 5357301 5358052 GAATGGTGTTCTAGGCGGA 59 NA Drosophila melanogaster 61 Srp54k FBgn0010747 FBtr0077169 1 1 1 80 3L 5146795 5146813 CCCTTCAAGACGAAACCCT 59 5146852 5146960 CAGCTCGTTTACCTTATCTATCAG 59 NA Drosophila melanogaster 61 CG32240 FBgn0052240 FBtr0073336 1 1 1 133 3L 4381317 4381393 TTTGTGACGGTTCTCAGCT 59 4381202 4381220 CTTTGAATCACCCGTCGTC 59 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 2 3 3 99 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 Faa FBgn0016013 FBtr0073278 2 1 1 65 3L 4073082 4073160 GAAGGCGGTTTCCATTGTG 59 4073035 4073054 TAGTCACCAATCTGTGCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 dib FBgn0000449 FBtr0073205 3 1 1 81 3L 4062825 4062844 ACAAGAATCTCGCAATGGTG 59 4062885 4063046 GGTAAGCAAACAGGTTAATTCC 58 NA Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 1 1 1 60 3L 3804764 3805841 ACATTAAAGCTCCTGATCAGGT 59 3804725 3804747 CTCTTCTCTTGTATCAAACGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107,FBtr0073106 1 2 2 60 3L 3198770 3198788 ATATGTGACAATGCGTGGC 59 3198408 3198427 CGGATATTGACCCTCTTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14956 FBgn0035403 FBtr0073026 2 1 1 119 3L 3157127 3157203 GTGTCTTCACCTCAGACCC 59 3157286 3157304 GTCGATGGTGTTCCAACAG 58 NA Drosophila melanogaster 61 mRpS35 FBgn0035374 FBtr0301626 1 1 1 245 3L 2781123 2781206 TGATGAAGAATTCCGAGTGCT 59 2781413 2781431 TTCATCAGCTCTGCATTGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302675 2 1 12 60 3L 2462973 2463063 CAAATGCAATGCAACCCTC 58 2463087 2463105 AGATTGCTGAAGAAGGCCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG9004 FBgn0035336 FBtr0072890 2 1 1 80 3L 2374606 2374626 GATGAAGACCTAACTGGAGAG 57 2374665 2374739 GTCCTCTTTAATCTTAGGTGCA 58 NA Drosophila melanogaster 61 CG11814 FBgn0035296 FBtr0072855 1 1 1 80 3L 1954526 1954608 TCAGATAAATCTCGTTTGGGAC 58 1954467 1954486 AAACTGCGCATAATCAACTG 57 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0301625 2 1 3 102 3L 1798834 1798855 CATTTGGCATTCCATTTCAGAG 58 1798918 1798994 TTCGATTTGGGCTCCTCTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798,FBtr0072799 1 2 2 80 3L 1717049 1717067 CAACTTTGACCAGAGGAGC 58 1716928 1717005 ATCGAATAGCTACCCACCC 58 NA Drosophila melanogaster 61 CG7991 FBgn0035260 FBtr0072765 3 1 1 81 3L 1712717 1712735 AGTTGCTCCGAATTAGGGA 58 1712780 1712855 CTGGACAATAGGCATCCCT 58 NA Drosophila melanogaster 61 RabX5 FBgn0035255 FBtr0301528 2 1 1 80 3L 1669612 1669691 AACTACAGTCTGGAAATGTGG 58 1669552 1669571 ACTCGCATTGCGATAATAGG 58 NA Drosophila melanogaster 61 FucTD FBgn0035217 FBtr0072693 1 1 1 103 3L 1417299 1417317 AATGAGAAGACTCTGCCGG 59 1417384 1417458 TAGTGACTGCAGTCATCGG 59 NA Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 3 1 2 156 3L 1330961 1331294 AAAGCTCAACGTTGAGTCG 58 1331412 1331432 GACGTACTTAATAATGTCGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Sac1 FBgn0035195 FBtr0072652 2 1 1 84 3L 1248180 1248267 TTACAGGAATCTTCGAAGTGG 57 1248313 1248331 TTCATGTCATCGTACACGG 57 NA InUTR Drosophila melanogaster 61 DIP2 FBgn0024806 FBtr0072520 1 1 1 80 3L 255208 255227 GAGCAAGTAACACTGAAGCC 59 255022 255169 CCAGGCTGTAATGAAACTTAAGG 59 NA Drosophila melanogaster 61 CG33229 FBgn0053229 FBtr0072499 2 1 1 67 3L 224593 224612 GAGCTTAGTAGCCTCGACAG 59 224642 224660 TTGCATGTGTCTTGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1820 FBgn0026169 FBtr0072259 1 1 1 60 2R 20063757 20063775 TGATATTAAGCCGGCAGGT 58 20063797 20063817 TGTTCCCAATCATAGTCACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841c FBgn0083017 FBtr0113522 3 1 1 109 2R 17218088 17218106 GGCAAATGCACTCTGTGTC 59 17218179 17218197 TAATCACCCTGATACGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33373 FBgn0053373 FBtr0086365 1 1 1 60 2R 15646334 15646352 ATACATCGGTTCTCGTCCG 59 15646292 15646310 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 3 3 3 86 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865154 20865232 ATGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0290218 1 1 4 86 2R 20443017 20443035 CATGTTCTTCCGACTGGAC 58 20443084 20443536 CAATTGGCCTTGCATAATCG 58 NA Drosophila melanogaster 61 tsr FBgn0011726 FBtr0072188 2 1 1 115 2R 19932423 19932441 TACGGACTGTTCGATTTCG 57 19932263 19932344 TTCTTCTTGACCTTGGCAG 57 NA Drosophila melanogaster 61 CG4324 FBgn0034956 FBtr0072197 3 1 1 93 2R 19904288 19904306 TCCATCTCCCGCAAATCTC 59 19904156 19904233 AACAGTGTAGGTATCATCCGG 59 NA Drosophila melanogaster 61 CG3825 FBgn0034948 FBtr0072204 3 1 1 95 2R 19863737 19863755 GTTTACAGCATGCGGTGAG 59 19863600 19863681 TTGAAACGAACCTTCTTGACAG 59 NA Drosophila melanogaster 61 Ssrp FBgn0010278 FBtr0072242 2 1 1 229 2R 19694881 19694899 GACTCGGATGAAGAGTCCA 58 19694610 19694690 TTGGAGGGTTTCTTTGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 2 3 3 62 2R 19587831 19587849 AGGCGGAGCTCTTTAAGAG 59 19587730 19587754 CTTCGTAGAATGATATGATGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 bw FBgn0000241 FBtr0072117 3 1 2 91 2R 19417049 19417126 GTTCTTTACAGACCTGGGCT 59 19416977 19416995 TCTCTTTGCCCTCCTTGTC 59 NA Drosophila melanogaster 61 CG3085 FBgn0034816 FBtr0071963 2 1 1 60 2R 18963471 18963548 GAGAAATCCCAAGAACTCCTG 58 18963567 18963588 CTTTATGTTCTTCACGTTCTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3085 FBgn0034816 FBtr0071963 1 1 1 153 2R 18962852 18962870 GAACCAGATGCGGAATGTG 59 18962987 18963069 ATTCAACTCGGAGATGCGA 59 NA Drosophila melanogaster 61 asrij FBgn0034793 FBtr0071902 1 1 1 80 2R 18774704 18774722 CAATCTGGACACGGAATCG 58 18774766 18774845 AGCATTGAACCAGAGTCCA 59 NA Drosophila melanogaster 61 RpL23 FBgn0010078 FBtr0071897 1 1 1 200 2R 18742373 18742977 AGGAAGAAGGTCATGCCTG 59 18743139 18743159 TATAGAGCTTGCATTGGATGC 58 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 1 3 3 109 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631808 18631826 GACTACGTGGTCGTTCCTC 59 NA Drosophila melanogaster 61 ppa FBgn0020257 FBtr0071924 1 1 1 60 2R 18575397 18575416 TGTAAACAGATCACGGACAC 58 18575356 18575377 TCTCAAGATTCCTTAGATGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112519 1 1 2 80 2R 18217683 18217704 CAGATCTTAAACGAAGATCCGT 58 18217744 18219691 TCTTGTAGTTCAAAGCCACG 58 NA InUTR Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801,FBtr0071802 2 2 2 180 2R 17960562 17960725 CTATAAGCAGAGCTTTGCCT 57 17960331 17960349 GTTGCTCAGGATGTCATCC 58 NA Drosophila melanogaster 61 CG10307 FBgn0034655 FBtr0071671 1 1 1 80 2R 17576715 17576797 CAAGCTAACAAAGATTCCATCC 57 17576836 17576856 TCGTCCAGTTTATTGTAGTCC 57 NA Drosophila melanogaster 61 CG10433 FBgn0034638 FBtr0071691,FBtr0071690 1 2 2 113 2R 17494112 17494193 TTACTACATGCTGCAGGGT 58 17494017 17494035 AATCCCTTGTTCGAGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071699 2 1 2 188 2R 17406368 17406442 CCTTATGAGTGGATCTGGGA 58 17406199 17406218 TTTCTCTGGACACCATACGA 58 NA InUTR Drosophila melanogaster 61 CG17974 FBgn0034624 FBtr0071611 2 1 1 80 2R 17236921 17236939 CTCTGGTTCAACGAGTTCG 58 17236800 17236879 ACCGTAGTCCTCAAATATGGG 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 2 2 2 99 2R 17107085 17107186 CATTGTCAAATTCCTCGTTGAG 58 17107007 17107026 GGACAGATTATTGCAGCTGG 59 NA Drosophila melanogaster 61 mago FBgn0002736 FBtr0071569 2 1 1 149 2R 17016321 17016340 CAAGAACGACACCATGATCC 59 17016452 17016528 ATCTCCAGTTCCTGTCGAC 58 NA Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112645 1 1 2 80 2R 16987555 16987726 GTGATCACAACTATAGGTTACGG 58 16987765 16987784 GATGATGGCATAGACGATGG 58 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319,FBtr0086318,FBtr0086317 3 3 3 89 2R 16143063 16143140 TCACTCAGGGAAATTGAATTGG 59 16142995 16143016 ACAGGAGTGTATGTAGAAACCC 59 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 2 1 2 178 2R 15671386 15671469 GCAGCAAGCCAACATAGAC 59 15671226 15671244 CCATGAAACCGCTCTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536 2 1 4 135 2R 15339041 15339060 TGTTCGACTGCTATAAGCGA 59 15336239 15338943 TGATCTCCCAGAACTTGGC 59 NA InUTR Drosophila melanogaster 61 CG11906 FBgn0034425 FBtr0086563 1 1 1 81 2R 15169804 15169887 CGACAAGGAGTATGATCTTTACC 58 15169745 15169763 GTCAGGCGTGAAACAAGTG 59 NA Drosophila melanogaster 61 Ir56a FBgn0050125 FBtr0086595 1 1 1 92 2R 14983086 14983105 CGTATTTGGAAAGTCTTCGC 57 14982917 14983031 GTTCCGATGAGTTGTACCA 57 NA Drosophila melanogaster 61 CG15100 FBgn0034401 FBtr0086627 3 1 1 105 2R 14737968 14737987 CTACACGAATGATGGCAACC 59 14737795 14737906 GTACTTAGCGTCATTTAGGTTAACC 60 NA Drosophila melanogaster 61 mRpS28 FBgn0034361 FBtr0301637 2 1 1 80 2R 14502097 14502179 ATTAATTGATCTGGACAACGCC 59 14502038 14502058 TCTATGTAGAGATCATCGCCC 58 NA Drosophila melanogaster 61 CG17669 FBgn0034352 FBtr0086722 3 1 1 60 2R 14341425 14341445 CCCATGCTGAATATAGAAGGA 57 14341385 14341403 TGAAAGCCATCTCAAAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM3 FBgn0040736 FBtr0086665 3 1 1 135 2R 14275696 14275714 TTCCTATCACTCGCCTTCG 59 14275884 14275902 CATCCTTCATTCTCCGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pen-2 FBgn0053198 FBtr0089842 3 1 1 166 2R 14165179 14165266 CTTCTTTGCTGGCTTTGCA 59 14165468 14165488 AGGCAGTTAGTACTATCAGCC 59 NA Drosophila melanogaster 61 CG30114 FBgn0050114 FBtr0086753 1 1 1 68 2R 14095519 14095537 TAATATTCGCAACCGCTGC 59 14095569 14095587 ATCAGCAGACTGTCCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4996 FBgn0034271 FBtr0086864 3 1 1 87 2R 13627854 13627932 GAACTCAAGAAAGTTCTCAACG 58 13627979 13627998 TAAGAACCTTCTGCTGAGTG 57 NA Drosophila melanogaster 61 CG10933 FBgn0034264 FBtr0086860 3 1 1 80 2R 13611335 13611353 CATAACTGGTTCCTCCAGC 57 13611394 13611475 ATCTTGGAATCAGGACTTAGAC 57 NA Drosophila melanogaster 61 rdgBbeta FBgn0027872 FBtr0086888 2 1 1 82 2R 13585371 13585393 CCCGAGTCTTCTATGTGATAGAG 59 13584360 13584437 TTTGGGTATAAAGGAACACGTG 59 NA Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 1 2 2 80 2R 13494101 13494122 GAAACCAGAGCTACTTGATCAC 59 13493972 13494061 TAAACTTCGTTGAGCTGTGC 59 NA Drosophila melanogaster 61 CG34193 FBgn0085222 FBtr0112386 3 1 1 61 2R 13397548 13397566 CAGGTGGGACATGGATCTG 59 13397657 13397676 GCCCAATTCTTCGTCATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 3 2 2 87 2R 13300527 13300545 ATTGGAATTTGCACGCCAG 59 13300654 13300672 TCTTCTCCACAGTACTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30457 FBgn0050457 FBtr0086998 1 1 1 84 2R 13048215 13048296 TCCACAATGAAATTCCTGGT 57 13048150 13048168 CATAGTTGTAGCCCGACAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15917 FBgn0034199 FBtr0086986 3 1 1 60 2R 13024277 13024295 ACAACCGAATATTGCTGGA 57 13024319 13024337 TTTCCGAACAGCTCAAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Amy-p FBgn0000079 FBtr0087004 2 1 1 61 2R 13007788 13007808 CAGAGTGAAACTGAACTTCCA 58 13007747 13007765 AGGCACACTATGCTCTTGG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33459 FBgn0053459 FBtr0089859 1 1 1 86 2R 12375706 12375725 AGTCTCAACACCATGGATGG 59 12375774 12375872 GTAAGCACGAATTCGCTCG 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 2 2 5 112 2R 12249021 12249226 TCGAGAAGTACTACTGCGA 57 12249302 12249320 GTACTTGCAGAGGAACTCG 58 NA Drosophila melanogaster 61 CG3687 FBgn0034097 FBtr0087132 3 1 1 109 2R 12124512 12124530 ACATTCTGGAGATGCTGGA 58 12124657 12124678 GGTAATGAAGCGTATGAATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 2 2 2 80 2R 12008552 12008572 GGACCCGAATACTTTATGGAC 58 12008613 12008698 CGATAGGAATCCAAAGGGTC 57 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 3 4 4 81 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747610 11747703 CTGCTCTAGATCTAGGCCC 58 NA Drosophila melanogaster 61 CG30083 FBgn0050083 FBtr0300381 2 1 1 110 2R 11599758 11599837 TCAAATACTTGCCGTTCGTC 59 11599667 11599691 CCTATATCGTTACTATAACTGCCAG 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 3 7 7 136 2R 11550671 11550750 TTATCAATGCACAGGGCCA 59 11550553 11550571 GAACACCTCGATGTACCGA 59 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0300777,FBtr0113082,FBtr0087337,FBtr0113083 2 4 5 140 2R 11443519 11449340 GATCGTAATGTATTCAACGCAC 58 11449440 11449459 GTCGTAGCTGGGTAAATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110998,FBtr0110999,FBtr0110997,FBtr0110995,FBtr0087426 3 6 6 80 2R 10835448 10835467 TTGCTCTATGAGATGTTGGC 58 10835330 10835405 GTCCTCAGTGTTCTGATCG 57 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110998,FBtr0110999,FBtr0110997,FBtr0110995,FBtr0087426 1 6 6 80 2R 10835449 10835470 GTCTTGCTCTATGAGATGTTGG 59 10835333 10835408 CTCAGTGTTCTGATCGGGA 58 NA Drosophila melanogaster 61 CG30077 FBgn0050077 FBtr0301734 2 1 1 78 2R 10488854 10488872 ACTTCCATGGTTAAGGAGC 57 10488972 10488990 CTATTGCCTCCTTTCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 Arc2 FBgn0033928 FBtr0087547 1 1 1 60 2R 10249876 10249898 CTTCCTACCAGATATACATGGAG 57 10249918 10249936 TCGATCACTTCGTCGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17059 FBgn0040754 FBtr0087739 2 1 1 89 2R 9107946 9108274 ATGGAAATGGACGAGTCCG 59 9108326 9108345 ATTGTAGAAGTCAGCGTGGA 59 NA Drosophila melanogaster 61 CG13325 FBgn0033792 FBtr0087722 2 1 1 80 2R 9011854 9011872 CGTGGACTCGTTTCTAGTG 58 9011914 9011989 AGTTTGCCTTTGGTCTTATCC 58 NA Drosophila melanogaster 61 Cyp6g2 FBgn0033696 FBtr0088009 1 1 1 207 2R 8076771 8076789 AGATGATCGAGTCACTGGA 57 8076531 8076600 GGTTGAGGAAAGTACTGGG 57 NA DesignRelaxed Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987,FBtr0087988 1 2 2 168 2R 8064066 8064084 CAACCACCTGTTGCTTCAG 59 8064216 8064293 TGTTCCGAATGCCATTTCG 59 NA Nonspecific Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047 2 1 2 80 2R 7869380 7869399 CTCTAAAGCACATTAGCCGC 59 7869252 7869339 TCGTGGTAATGAAGGTATCGT 59 NA Drosophila melanogaster 61 CG30036 FBgn0050036 FBtr0088050 2 1 1 108 2R 7866418 7866436 ATGTACCTGAGTCCACGAC 58 7866273 7866291 TCCCTTGGTCCAGATAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088042 3 1 2 126 2R 7860430 7860448 GATGACCTATGCGATTGGG 58 7860538 7862871 AGCTTGTTTATCAGCAGCT 57 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299853 1 1 4 78 2R 7184806 7184824 CAATCCATTCCCGACTTCG 58 7182270 7182288 ACAGCTTGTAGCCAAAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34225 FBgn0085254 FBtr0112418 3 1 1 60 2R 7132978 7132997 ACTGGTTGTATGGACTCTCG 59 7133019 7133038 AGCAGGATCCTCATTCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12942 FBgn0033569 FBtr0088236 1 1 1 80 2R 6782933 6782953 GATGACTCTAAACGACGATGG 58 6782992 6783066 ATTCCATTGGATTTCAGCTGAG 59 NA Drosophila melanogaster 61 Lsm10 FBgn0033554 FBtr0088248 2 1 1 60 2R 6708894 6708914 TTTGATCACTTTATGGTGCGG 59 6708854 6708874 CCAAGTACGAAGGTATGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460,FBtr0088262,FBtr0088263 3 3 3 80 2R 6321603 6321679 GGAGCTGACATTGAGAACG 58 6321722 6321741 CTGTATCACTGACGTCTGGT 59 NA Drosophila melanogaster 61 CG12897 FBgn0033517 FBtr0088317 3 1 1 177 2R 6300371 6300390 ATTCGGGATCGATACACCTG 59 6300083 6300101 TGATCCAGAAGATGCCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 2 2 2 80 2R 6146886 6146904 ACGCGGATATGGATACGAC 59 6146945 6147030 TAGTAGCGATCTCTGGATAACC 58 NA Drosophila melanogaster 61 CG2292 FBgn0033479 FBtr0088431 2 1 1 121 2R 5953208 5953226 CATGGAATGACGGATTCGG 58 5953047 5953065 ATAAATGTTCGCCCTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12129 FBgn0033475 FBtr0088395 3 1 1 104 2R 5920961 5920981 ATAGAGTCAACGTTGTTCACG 58 5921046 5921117 CATAAAGATCCGGCTCTTCG 58 NA Drosophila melanogaster 61 CG1675 FBgn0033457 FBtr0088375 1 1 1 60 2R 5753796 5753814 CTTTCGACGCATAAAGCAG 57 5753838 5753856 CACGTTCTCCTTCAGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 2 1 1 84 2R 5704974 5705123 AAAGATCAACTGGTTCGGG 57 5705171 5705189 CTTGAAGTCCTCCATCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 2 1 2 85 2R 5476751 5476822 CTGACTTCGGCGTTTAGTG 59 5476871 5476889 TTAATGACCATGGGCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299917,FBtr0299916 2 5 5 80 2R 5397497 5397732 ATGGACTATCCAAGAACCCG 59 5397775 5397793 AATGGGTATGAACTCGCGA 59 NA Drosophila melanogaster 61 CG13955 FBgn0033412 FBtr0088551 3 1 1 107 2R 5310235 5310253 CAAGCACAGGCCAATATCC 59 5310067 5310164 ATCGCGATTGTGAATCCTG 58 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 1 2 2 80 2R 5047801 5048140 TGTTTCCATGATAGGATTCTCG 58 5047742 5047762 GGATTGACCACATAGTAGCTG 58 NA Drosophila melanogaster 61 CG13745 FBgn0033354 FBtr0088675 3 1 1 80 2R 4825493 4825569 CACATGCAATGGCTGTCTG 59 4825431 4825452 GACGCGATTAGAGATCTTTAGC 59 NA Drosophila melanogaster 61 ana2 FBgn0027513 FBtr0088685 3 1 1 92 2R 4786810 4786879 CAATCAAGCAGGTAGACGC 59 4786736 4786754 GGAATCACTCGTGCTTGTG 59 NA Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 3 2 2 96 2R 4496812 4496830 AAAGTACAAGTCGCGTCTG 58 4496889 4496968 ATTGGAAATCTTGGCTTCCC 58 NA Drosophila melanogaster 61 CG12780 FBgn0033301 FBtr0088736 1 1 1 60 2R 4439538 4439556 GGGATGTGGAGCTAAAGGA 58 4439496 4439516 CCATTATACCGCACTGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lcp3 FBgn0002534 FBtr0088743 3 1 1 108 2R 4322996 4323072 GTTCAAGATCCTGCTTGTCTG 59 4323142 4323160 CTTGCTGACAAAGCCATCG 59 NA Nonspecific Drosophila melanogaster 61 CG30373 FBgn0050373 FBtr0088806 2 1 1 291 2R 4052110 4052128 TGCTTGAGTTTCCCATCGA 59 4051776 4051794 AGTACAGGAGGAAGATGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42516 FBgn0260390 FBtr0300661 1 1 2 80 2R 4018672 4018774 ACATTTCTAACAAGGGCCCA 59 4018611 4018629 CTCTGTGTCCTCGTACTCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Socs44A FBgn0033266 FBtr0088784 2 1 1 85 2R 4015690 4015708 CGGAAGAAATGGCTTGAGC 59 4015756 4015837 CACACTTGGTTGAGCATCTC 59 NA Drosophila melanogaster 61 sut3 FBgn0028561 FBtr0088779 1 1 1 80 2R 3978151 3978170 CTCATGATGACGATCTCCTG 57 3978210 3978293 TATAGTCGACATTAGTTCCAGG 57 NA Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876,FBtr0088877 2 2 2 60 2R 3848641 3848662 GGTCTGAAAGCTATGGATTTGG 59 3848602 3848623 GAATGATGTTCACCCTAGTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34430 FBgn0085459 FBtr0112731 1 1 1 80 2R 3831038 3831058 CCTATGAATTCGACATAGCCG 58 3831096 3831178 CCATCTGTAGGATTAATATGCCG 59 NA Drosophila melanogaster 61 Orc1 FBgn0022772 FBtr0088959 1 1 1 85 2R 3410768 3410849 GCTGATGGGTAAAGTCACC 58 3410701 3410719 TAACGATCTCTTGCAGCTG 57 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 2 5 11 142 2R 2764834 2764852 ATGTTCTCCGATCAGGCTG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Cyp6a2 FBgn0000473 FBtr0086133 2 1 1 106 2R 2667756 2667844 TCATCTCAGAAACCCTGAGG 58 2667669 2667687 GCCCTTCTCAATCACAAGC 59 NA Drosophila melanogaster 61 geminin FBgn0033081 FBtr0086147 3 1 1 60 2R 2543652 2543670 TGAAGCAGCAGAGACAGAC 59 2543610 2543631 AGGTTCTCCTTATCGTTTACGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bap170 FBgn0042085 FBtr0086107 3 1 1 91 2R 2525435 2525455 TTCATCAGGAGAATCATGCAC 58 2525508 2525696 GTGAATGTTGCTCCATCGT 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640g FBgn0083020 FBtr0113554 1 1 1 64 2L 20421819 20421837 TCGTGTCTACAATGCTCCA 58 20421862 20421883 GGAAATATAAGACTGCTTCGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6t2Psi FBgn0041336 FBtr0081529 1 1 1 80 2L 21283280 21283301 TAACCACCAACTTAGCTATGAC 58 21283048 21283239 CAGATCGATTGTGGATCGT 57 NA Drosophila melanogaster 61 snRNA:U6atac:29B FBgn0041717 FBtr0079659 1 1 1 60 2L 8389724 8389743 GTGTTGTTTGGAAGGAGAGC 59 8389765 8389784 CCGTTTATGTGTTCCATCCT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 1 3 3 94 2L 22959943 22959962 AATCATTCACGAATCGTTCG 57 22959807 22959888 CCACTACAGCTTTAATTGCAC 57 NA Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 1 2 2 60 2L 22690631 22690649 ATCTTGTGCTATCAGCACG 58 22690589 22690607 AAGAACTCCCAATGCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40006 FBgn0058006 FBtr0111230 2 1 1 82 2L 22648636 22648659 GAATCCGATAGACATACTAAGCAG 58 22611696 22648601 GTATAAATAAACGGGTAGGAACTCG 59 NA Drosophila melanogaster 61 CG3635 FBgn0032981 FBtr0299879 2 1 1 81 2L 22175592 22182745 ACAAAGTTACGGCTACGTC 57 22182789 22182808 AGGATGTAGTCATCATGGGT 57 NA Drosophila melanogaster 61 CG31702 FBgn0051702 FBtr0085934 3 1 1 81 2L 22072544 22072611 ATACCACGGGATTGGTTCC 59 22072653 22072674 TAGCCTTTCATTATCTCGTCCC 59 NA Nonspecific Drosophila melanogaster 61 tio FBgn0028979 FBtr0089377 2 1 1 100 2L 22020082 22020701 GAGTGCAAGTGAGTTAACTAGTC 59 22020761 22020779 CATTCGATGGACATCGGAC 58 NA Drosophila melanogaster 61 His2A:CG33859 FBgn0053859 FBtr0091863 1 1 1 60 2L 21528619 21528641 CTAGAATTATTCCGCGTCATCTG 59 21528660 21528679 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081338 3 1 2 152 2L 20097164 20098029 GGCATCCAAATTAACTTCAGGT 59 20097033 20097052 TTCTTCAGTCGAAGTCTCCG 59 NA InUTR Drosophila melanogaster 61 scw FBgn0005590 FBtr0081261 3 1 1 60 2L 19700282 19700304 CGGTATTGGTTACACAATAAGGG 59 19700244 19700265 CGCCAATTGATATCCTTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scw FBgn0005590 FBtr0081261 2 1 1 60 2L 19700278 19700299 TTGGTTACACAATAAGGGACTG 58 19700239 19700259 GGAATCGCCAATTGATATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 drl FBgn0015380 FBtr0081195 1 1 1 80 2L 19207433 19207454 CTATGAGATGGAGCACTATCTC 57 19207493 19207637 ATAATGGTGAAGAGCTCATCG 58 NA Drosophila melanogaster 61 CG10700 FBgn0032754 FBtr0081171 2 1 1 60 2L 19078051 19078069 ATTGGGCGAGTTGATAGGA 58 19078009 19078032 CAAATCTACCTTATTCTCCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ssp3 FBgn0032723 FBtr0081193 3 1 1 83 2L 18940624 18940702 AAACCGTAGTGGAATCCTG 57 18940559 18940578 CTATGGTCTTGGAGAACTCG 57 NA Drosophila melanogaster 61 Cyp310a1 FBgn0032693 FBtr0081077 1 1 1 80 2L 18651980 18652053 CTAGAACCGATTAATGATGCAG 57 18651921 18651942 AGATACTTTCAAGAGATCCTCG 57 NA Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081089 1 1 3 125 2L 18443058 18443160 TAAATAAGCCGCCAAGATGAC 58 18442953 18442971 TTGATTGCCTTGTCCTTGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 2 2 2 147 2L 18134814 18135581 CATTTCAACGAGGTGATCCAG 59 18134687 18134705 TAGGAACATCGTAGCGCAG 59 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 1 4 4 80 2L 17418041 17418059 TCAAACAGATGGCCATAGC 57 17417634 17417999 GTTTCAGCTCCACATTAACAC 57 NA Drosophila melanogaster 61 CG13280 FBgn0032609 FBtr0080931 3 1 1 81 2L 16803196 16803284 GTGTCCAAATGTCGATGTAGTG 59 16803136 16803154 GTCGTGGTTCAACATCAGG 58 NA Drosophila melanogaster 61 CG13280 FBgn0032609 FBtr0080931 1 1 1 80 2L 16803196 16803284 GTGTCCAAATGTCGATGTAGTG 59 16803137 16803155 TCGTGGTTCAACATCAGGT 59 NA Drosophila melanogaster 61 CaBP1 FBgn0025678 FBtr0080837 1 1 1 92 2L 16356564 16356582 TAAGCGGTTTCGCAAACTC 59 16356421 16356439 ATAGAAGGCACTAACGCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838,FBtr0080839 3 2 2 162 2L 16351952 16351972 GGCTATAGGAACATATCAGCC 57 16349356 16349374 TTAGGAGGAGTTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 heix FBgn0028375 FBtr0080852 1 1 1 111 2L 16298184 16298880 AAGGATGAGGTGGTATCGC 59 16298091 16298109 AGTAGATCAGTGCCAGGTG 58 NA Drosophila melanogaster 61 crp FBgn0001994 FBtr0080854 3 1 1 80 2L 16287142 16287163 AACGGAGGAAGTTATTCTAGAG 57 16279155 16287101 TCCTCTAGTTGCAATTGCA 57 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 1 3 3 83 2L 16045892 16045910 GGATCCGAGAAGGAATCGG 59 16045955 16046035 GATTTGGCTCGCAATACTCTC 59 NA Drosophila melanogaster 61 CG15254 FBgn0028949 FBtr0080783 2 1 1 128 2L 15614673 15614692 ACAGCTGGCTATATTGAAGG 57 15614508 15614582 ATGCTCGGTGTCAATATCG 57 NA Drosophila melanogaster 61 ms(2)35Ci FBgn0011239 FBtr0080731 3 1 1 96 2L 15292664 15292741 CGTTAGAATTGTCACAATGCC 58 15292798 15292817 CATTGTAAGACCTGCGTACG 59 NA InUTR Drosophila melanogaster 61 TfIIS FBgn0010422 FBtr0080722 2 1 1 89 2L 15060443 15060461 AGATGAGCAAGATGGCCAG 59 15060306 15060326 TGTCGAGATTGATGTTAAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33645 FBgn0053645 FBtr0091622 3 1 1 193 2L 13533027 13533045 CGATATTACCGTGCATGCC 59 13533257 13533275 TCTGTGGTGGAGTTAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9267 FBgn0032524 FBtr0080519 3 1 1 90 2L 13444562 13444646 TCGAATTGGTGCGATATCC 57 13444490 13444510 GGTATCCAGATGGTGTATCTC 57 NA Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 1 1 1 60 2L 13257073 13257091 CTGGTGGGATCATTGAGTC 57 13257115 13257190 CCACTGCAGGAATCTTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5122 FBgn0032471 FBtr0080431 1 1 1 134 2L 13130641 13130660 TTACCCTGAAATAAGCACCC 57 13130757 13130835 TATCCGGTGCTTACAGAGG 58 NA InUTR Drosophila melanogaster 61 CG6180 FBgn0032453 FBtr0080398 3 1 1 61 2L 12708118 12708136 CACCCAGGTGAAGGATGAG 59 12708161 12708179 GGGTGTACAGCTTATTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 3 1 8 142 2L 12482620 12482640 ATGTATCCAAGTATTTCGGGC 58 12458213 12477122 TTGACCAGATCCATTGCCT 59 NA Drosophila melanogaster 61 CG6388 FBgn0032430 FBtr0080367 1 1 1 80 2L 12428533 12428551 ATCAACACAAACATCCGGC 59 12428593 12428676 AAGATACATGAGGGTCATTGC 58 NA Drosophila melanogaster 61 CG31862 FBgn0051862 FBtr0080350 2 1 1 60 2L 12339149 12339167 GTGATCCGGAATGGTAGCT 59 12339191 12339209 TGTATGTCATACCCTGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ced-12 FBgn0032409 FBtr0080330 1 1 1 90 2L 12099897 12099917 GCGATTGTTAAGCTCAAAGAG 58 12099969 12100050 AATGTGTACCTTCCACCAG 57 NA Drosophila melanogaster 61 Ada1-2 FBgn0051866 FBtr0080287 1 1 1 60 2L 11993760 11993778 CGATGTGACCTTCCTCTCC 59 11993866 11993884 GGTGATTACTGTGCGTTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG14934 FBgn0032381 FBtr0080275 2 1 1 81 2L 11848349 11848368 ATTCGGTGAGAAATCTGTGG 58 11848407 11848489 CTCCTCGCCATTATAAGTAATACC 58 NA Drosophila melanogaster 61 Sfp33A1 FBgn0259962 FBtr0300306 2 1 1 179 2L 11754337 11754415 ACATAATAGCCGAGTTGTGC 58 11754177 11754195 TTGTCCACGATTCCTTGGT 59 NA Drosophila melanogaster 61 CG32830 FBgn0052830 FBtr0080205 1 1 1 104 2L 11254614 11254632 TAATCCGGCAATGGTTCCA 59 11254699 11255471 GGAATGTGCAGAATCGAGTG 59 NA Drosophila melanogaster 61 Nup160 FBgn0260937 FBtr0080199 3 1 1 80 2L 11126835 11126910 ATCAATAAGATGCTTTGGCCG 59 11126949 11126970 AACAATGATGTGATGACAGGTC 59 NA Drosophila melanogaster 61 Nup107 FBgn0027868 FBtr0080121 1 1 1 210 2L 10733952 10733970 ACAAGGCGTATCTGTCTGG 59 10733696 10733778 AGTTCGATGGTTTGCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 3 3 3 80 2L 10464362 10464380 TCCATGTTCAAGAGCACCA 59 10464238 10464319 ATCGCTATGATGAACAACGG 58 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031,FBtr0080030 1 2 2 80 2L 10460457 10460478 ACGGTTAATGAGTATGTGAGGA 59 10460518 10460597 GCTTTCCAGAGTAACACCCT 59 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 3 4 4 81 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415401 10415481 TGCTGAAGGTACTTTAAGGC 57 NA Drosophila melanogaster 61 da FBgn0000413 FBtr0080008 3 1 1 83 2L 10388514 10390059 CAGTGGATATTAGGATCTATTGCTG 59 10390100 10390118 GAAGCAGTTCTGGAACACC 58 NA InUTR Drosophila melanogaster 61 CG34043 FBgn0054043 FBtr0300408 2 1 1 90 2L 10280114 10280134 CAGAATACAGAGATTGCGGAC 59 10279678 10280064 ATTCCTCCACTATTTCTGCGA 59 NA Drosophila melanogaster 61 Mob3 FBgn0259482 FBtr0079983 3 1 1 81 2L 10266043 10266064 CATTGAGCATTTAATGGACTGG 58 10266106 10266211 GGGAAATGGAACATCCGTG 59 NA Drosophila melanogaster 61 CG5676 FBgn0032200 FBtr0080086 2 1 1 80 2L 10255129 10255148 ATAAGAGCGTGGATAAGCTC 57 10255005 10255088 ATCTTTCGGTCTTATCCTTCC 57 NA Drosophila melanogaster 61 yip2 FBgn0040064 FBtr0079876 2 1 1 181 2L 9915778 9916056 GAAATGTGATCGCGTCCTC 59 9916201 9916219 GGTAAGGGCTATCTTGGCA 59 NA Drosophila melanogaster 61 CG31709 FBgn0051709 FBtr0079856 1 1 1 80 2L 9579139 9579158 GACTTACTACAGGGAACAGG 57 9579017 9579099 CTAAGCTTAAATAATACCGCCC 57 NA Drosophila melanogaster 61 CG3759 FBgn0032116 FBtr0079807 3 1 1 80 2L 9420815 9420834 GTACTCTTAACAGCACTGCT 57 9420874 9423309 GCAGATGGTATTATCATCTGCT 58 NA Drosophila melanogaster 61 Aldh FBgn0012036 FBtr0079806 3 1 1 125 2L 9390128 9390256 TATCTTGCCAGTCTGGAGAC 58 9390344 9390362 CTTGCCATGGTTCTTGTCC 59 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 2 4 4 98 2L 8688852 8688933 TTCTTCGATCCCAATGCCA 59 8688772 8688793 CCGATCTGATATGTAGTCCTCG 59 NA Drosophila melanogaster 61 mRpL51 FBgn0032053 FBtr0079696 2 1 1 60 2L 8517111 8517135 GATATGAGGACAAGATCTTCAAGAG 59 8517075 8517094 AGTTTCTGTCCATTGTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 1 2 2 96 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380310 8380451 TTCTCAGTGGCATAACGCA 59 NA Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 1 2 2 90 2L 8372746 8372891 TATTATGGACCCACGGTGG 58 8372945 8372963 TCTTGCCCAAATCCAAGTG 58 NA Drosophila melanogaster 61 CG13791 FBgn0031923 FBtr0079521 1 1 1 60 2L 7578291 7578309 CCAGGCAATTGCAATACCA 58 7578249 7578272 GTCAGCATATCTATATTCTCGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 2 2 2 83 2L 7392132 7392150 ATTTACACCTGCCAAACCA 57 7392011 7392087 ATCTAGTTCTTGTAGCTGACC 57 NA Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0079353 3 1 2 82 2L 7013510 7013530 GAATCTGTTCAAAGGATCCGT 58 7013570 7013662 GGAAGCATTCCATATAAACCTCC 59 NA Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0113027 3 1 2 106 2L 7012415 7012434 TCATCACAGTTATACCCGGC 59 7012503 7013667 GATGCGGAAGCATTCATCG 59 NA Drosophila melanogaster 61 CG17375 FBgn0031861 FBtr0300821 3 1 1 104 2L 6805509 6805527 GATCGAGTTCATGTGGTCC 58 6805351 6805443 CGCACATACCAAGAATAAGTC 57 NA Drosophila melanogaster 61 CG13984 FBgn0260452 FBtr0079247 3 1 1 60 2L 6309058 6309082 CAACGATGATAAGTACGATGATCTC 59 6309100 6309118 CCGGTCATACCCATACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9154 FBgn0031777 FBtr0079213 1 1 1 80 2L 6070276 6070296 TTTAGTATAGCACTGCTCTCC 57 6070162 6070235 GAACTCGAATATGTGCACTG 57 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079151 1 1 2 296 2L 5923471 5923543 AAAGTGTCAGTGAGCAGCA 59 5923193 5923211 GGAAGCGCTAACTCTTTGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14000 FBgn0031749 FBtr0079153 2 1 1 60 2L 5909211 5909229 AGGGCTCTAGCTATTCTCG 58 5909169 5909190 CTTGGCTTATGGACCAATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31644 FBgn0051644 FBtr0079159 2 1 1 90 2L 5818276 5818371 GTTTAAGTTTCCCATGCATGAC 58 5818207 5818226 AAGAAGTGGAGCTAACAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12511 FBgn0031729 FBtr0079113 1 1 1 60 2L 5678958 5678977 GCTCAAGACATTCTCACAGC 59 5679000 5679018 TTCTCTGACCTCTAGCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111 1 1 3 108 2L 5662969 5668824 AGACCAACTAAAGCTCTCCA 58 5668956 5668974 TTGGTGTAACGGAACATGC 59 NA InUTR Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079120 2 1 3 80 2L 5580896 5580978 GCTACACAAGAAGAGCACTG 59 5580835 5580857 GAATAGTTCATGGTCGATAAGGG 58 NA InUTR Drosophila melanogaster 61 Cyp4ac3 FBgn0031695 FBtr0079068 3 1 1 128 2L 5268888 5268906 TATTGTTCGTGCCGAAGAC 58 5268998 5269066 TGCCATTTCTGGTCTATGC 57 NA Drosophila melanogaster 61 Cyp4ac2 FBgn0031694 FBtr0300456 1 1 1 85 2L 5267182 5267384 AAACAATGTTTGCGAAACCG 58 5267432 5267450 CAATGGCGTGAATCGACTG 59 NA Drosophila melanogaster 61 Cyp4ac1 FBgn0031693 FBtr0079066 1 1 1 80 2L 5264428 5264447 AGCTGATAACGAAGAACGTG 58 5264487 5264566 ATTTGTGATCCGTGCTTATCAG 59 NA Drosophila melanogaster 61 CG14035 FBgn0031685 FBtr0079020 2 1 1 81 2L 5103587 5103982 CAGTTGCAAGACAGCAGTG 59 5104025 5104045 CCGATGATTCGAAAGATTCGG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 3 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 Tfb5 FBgn0259719 FBtr0301130 2 1 1 76 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010608 5010626 ATGAATTTGCGTCCCAGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34125 FBgn0083961 FBtr0110839 2 1 1 62 2L 4965787 4965805 TACGACTATCGCCATTCCG 60 4965890 4965908 TTCTTCATACGTTGGCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 3 4 4 67 2L 4904926 4904944 CTGCCCTCCATCTTATCCA 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 morgue FBgn0027609 FBtr0077457 3 1 1 183 2L 4444612 4444630 CAGTTTCTCGGGAGTTCTG 57 4444385 4444466 CAGCAGGTGTTACTATTCGA 57 NA InUTR Drosophila melanogaster 61 CG16857 FBgn0028482 FBtr0077425 3 1 1 118 2L 4330949 4331035 CTTTCAAACGCTACCCTCG 59 4331117 4331135 CAGTGAGATTCCAGGGAGC 59 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077481,FBtr0077482,FBtr0077479 2 6 6 82 2L 4190610 4190630 ATGAGGACACCATTCTGAGTC 59 4190482 4190566 TTGGCAGGTAACCAAATGC 59 NA Drosophila melanogaster 61 CG34176 FBgn0085205 FBtr0112367 1 1 1 191 2L 4004192 4004210 AGGTACAGATTGCACCACC 59 4004363 4004383 CTCAATACTGTGGATTGTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 1 4 4 80 2L 3780518 3780538 CCCTATTCCTGTGATATCTGC 57 3780577 3781922 CTCCTTGGAGTGAATATACCTG 57 NA Drosophila melanogaster 61 CG42463 FBgn0259953 FBtr0302203 2 1 1 82 2L 3668983 3669061 AAAGGAACCCATATGCAGG 57 3668919 3668940 TTCGAACTTCATAGGTATACCC 57 NA Drosophila melanogaster 61 CG3213 FBgn0031545 FBtr0077561 3 1 1 60 2L 3517956 3517974 AGCTCTTAGAGAACGAGCA 58 3517914 3517932 TGCATCTCATCCTTCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 betaggt-II FBgn0028970 FBtr0077631 1 1 1 60 2L 2880265 2880283 TTCATACTGTCGTGCCAGG 59 2880307 2880325 GCATGTTGCCAGTTCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0273293,FBtr0077621,FBtr0077623 3 3 3 116 2L 2856099 2856119 TCCAGCTGTCATTTCTTTCTC 58 2856268 2856286 GATCAACATTCTCACCGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 3 2 2 141 2L 2263743 2263821 GGAATGGGCCAATCATCTC 58 2263924 2263944 GCTATTGATTTCCCGATACCA 58 NA Drosophila melanogaster 61 mio FBgn0031399 FBtr0077835 3 1 1 80 2L 2219096 2219170 ATGCTACAGGAGTGAGCAG 59 2219212 2219232 TCTATAAAGCGATCCAGCTCC 60 NA Drosophila melanogaster 61 CG34172 FBgn0085201 FBtr0112363 2 1 1 90 2L 2192799 2192817 TCTACCCGATGGACTTTCC 58 2192665 2192683 AATCTTATCCGCAGGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0077866 3 1 2 82 2L 1991819 1991839 CATCAAGGACGCTGATAAGTG 59 1991619 1991778 CTGCACTATCACGTTTCATCTC 59 NA Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918,FBtr0114554 3 2 2 60 2L 1517871 1517889 ACATCCGGCAGTATGACAC 59 1517829 1517849 CGCTTGAAGTTTATCTCCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NLaz FBgn0053126 FBtr0077942 3 1 1 106 2L 1361574 1361654 AATCATCACTCGAGTTCGC 58 1361486 1361504 TTAACATCTGGGCACTTGC 58 NA Drosophila melanogaster 61 r-cup FBgn0031142 FBtr0077269 2 1 1 71 X 20895719 20895827 AATGATATCAAGCGCCTGC 58 20895666 20895684 TCGATTCGTCTTGATGACC 57 NA DesignRelaxed Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 1 1 1 67 X 19600131 19600211 GATCCTCGTCTCAAGGAGG 59 19600242 19600260 TATTCGGCATGGTCAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 1 1 1 71 X 18660464 18667261 CTTTCAGTTCTCGCAAGCC 59 18660411 18660429 TAGCGCTCACAGGATATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9784 FBgn0030761 FBtr0074289 2 1 1 60 X 16491676 16491696 CAGATACTGGAGAACCATCAC 58 16491636 16491655 AGTCGTGATCGTAGATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Chrac-16 FBgn0043001 FBtr0073642 1 1 1 60 X 11911628 11911647 AGAATCTGGAGTTTCTGCTG 57 11911587 11911605 TCCTGGAACTGGTGTACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10362 FBgn0030358 FBtr0073590 3 1 1 80 X 11823534 11823757 ATAACGCTTAGGGTCAAACAG 58 11823474 11823492 ACTAATTGACCAGTGCGTG 58 NA Drosophila melanogaster 61 ALiX FBgn0086346 FBtr0085241 3 1 1 80 3R 23525265 23525501 GATTGTGTACGCCTATTATGACC 59 23525207 23525230 CACTTAAAGGGTATCTGAAGTTCG 59 NA Drosophila melanogaster 61 Golgin84 FBgn0039188 FBtr0084629 1 1 1 115 3R 20182200 20182274 GCACAGATGATGTCAAAGCA 59 20182104 20182122 CCGAATACCCATGGAGTCC 59 NA Drosophila melanogaster 61 sec10 FBgn0027103 FBtr0084547 1 1 1 80 3R 19960654 19960733 GAGGAGTTTGAACAGGAACC 58 19960774 19960794 GTTCTGGAGTTCATTGTTGGT 58 NA Drosophila melanogaster 61 CG3337 FBgn0038871 FBtr0084107 1 1 1 106 3R 17049040 17049058 GAACGTTCTCAGCTTCCTG 58 17048890 17048908 TTAGAGCACCACAATGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 ort FBgn0003011 FBtr0083784 2 1 1 92 3R 15488645 15488771 GAATAGAAGGATTGTAACCACCAC 59 15488822 15488840 ATTATCCGCGACTCCTGTC 59 NA Drosophila melanogaster 61 CG31287 FBgn0051287 FBtr0083256 2 1 1 132 3R 12029662 12029739 CCGTAAATTTGGTAACCAAGC 58 12029831 12029851 GCATGTTCGTTATAAAGCTGC 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 2 7 11 119 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734451 2734603 TCTGATGGACCTCTGTCAC 58 NA Drosophila melanogaster 61 PEK FBgn0037327 FBtr0078770 1 1 1 96 3R 1287863 1287883 GGATGTGGATATAAAGGTGGT 57 1287724 1287808 GTGATCAAACTTGTACTTCCAC 57 NA Drosophila melanogaster 61 CG14448 FBgn0037191 FBtr0078534 1 1 1 60 3L 22781789 22781807 CACGACACCTACACTACTG 57 22781829 22781849 GATCCACAAACAAGGGTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33766 FBgn0053766 FBtr0091767 3 1 1 161 3L 22638773 22638866 TAATCGTGCCAATACCTACGA 59 22638989 22639007 TATCCATTGTGACACCCGG 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 2 2 2 167 3L 16854335 16854411 GGCCACACTAATTACAGGT 57 16854539 16854560 GCTCATTGGTTTGAGAAATAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13031 FBgn0036655 FBtr0075319 2 1 1 78 3L 16717994 16718068 CAGCAAATGTTGATTCTCGT 57 16718109 16718127 GAAACAGTGCTGGATCCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 3 4 4 67 3L 16346790 16346808 GCATCATCAACTTCACCCG 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7560 FBgn0036157 FBtr0076173 2 1 1 80 3L 11418887 11418907 AGGGATACACTAGTTTAGGCG 59 11418948 11419034 CTCCAGCATCAATCTTTGCC 59 NA Drosophila melanogaster 61 Or65b FBgn0041624 FBtr0077005 3 1 1 104 3L 6319953 6319973 GACCTCTGCGTAATAATCAGG 58 6320036 6320110 ACATTGGTTAAGTATAGCGCTG 59 NA Drosophila melanogaster 61 CG32260 FBgn0052260 FBtr0073214 2 1 1 80 3L 4143690 4143709 ATCGGTTCGGATATGATGGT 58 4143751 4143983 TTGACAGGATTGAGGTCTCC 59 NA Drosophila melanogaster 61 CG13807 FBgn0035323 FBtr0072878 1 1 1 134 3L 2263186 2263204 CATCCCTACCACAATCGCT 59 2263363 2263381 ATCGTATCTGTTGTTGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13545 FBgn0034828 FBtr0071972 2 1 1 161 2R 19045542 19045619 TAGCTTTGGCCCTATTAATCCA 59 19045402 19045420 GAGTAGGTGGTCACAGGAG 58 NA Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086478 2 1 2 89 2R 15588147 15588166 CACATGAGCCTGATGAACAG 59 15587996 15588095 ACAGCTCACAAAGCAATCG 59 NA Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 1 2 2 80 2R 15249504 15249525 TTACTTCATCTACTTCTCGTGG 57 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 DptB FBgn0034407 FBtr0086621 3 1 1 119 2R 14754937 14754958 CCGCTAGTCTTCTATTCATTGG 58 14755038 14755112 AATTGGGAGCATATGCCAG 58 NA Drosophila melanogaster 61 imd FBgn0013983 FBtr0086725 2 1 1 163 2R 14298385 14298403 ACAAGAGGAACCGGATGTG 59 14297823 14298260 ACAGCTGGTATATCACCTCTC 58 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0112809,FBtr0087465,FBtr0112810 3 4 4 98 2R 10681340 10685772 TTGACCAGAGCAATTTGGG 58 10681260 10681278 ATAAGGCGATCACGAAGTG 57 NA Drosophila melanogaster 61 CG6337 FBgn0033873 FBtr0087646 3 1 1 82 2R 9722517 9722535 AACCATCGACAGTGGATGG 59 9722333 9722474 AGGTCTTGTTGAAATTGTCCTC 59 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088490 2 1 4 91 2R 5717354 5718801 CAATAACAGAGCGAACGACG 59 5717282 5717300 GTTGTTGATTGTCTCGGCC 59 NA InUTR Drosophila melanogaster 61 CG16771 FBgn0032779 FBtr0081204 3 1 1 60 2L 19428566 19428586 CCGTTGAGTCTACACTTTCCT 59 19428608 19428626 ATGACCAAGGTTTCGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4751 FBgn0032348 FBtr0080200 3 1 1 82 2L 11131613 11131684 GTGAACTGGATGCTGAACG 59 11131727 11131748 ATTCGAAACGGTATTATGTGCG 59 NA Drosophila melanogaster 61 CG14040 FBgn0031676 FBtr0079009 3 1 1 86 2L 5053285 5053303 CAATACCGTCACGGTTGTG 59 5053353 5053429 GAGCGTAGGTTGTTGTCTC 58 NA Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077963 3 1 2 60 2L 1166959 1166977 GCAACTTTCATCCCGACAC 59 1166999 1167019 TGTTGGGTAACGTTATAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3345 FBgn0031240 FBtr0078127 1 1 1 91 2L 269379 269465 TCGGACAGGACTTCAAGAG 58 269520 269538 TAGGTTGGAGTCGTGTAGC 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0301421,FBtr0301423 2 5 7 90 2R 2613013 2613031 AAGGAGTACGGAGTGTTCG 59 2612883 2612959 CTTCGTAAAGATCACCGGC 58 NA Drosophila melanogaster 61 Gr59e FBgn0041233 FBtr0072115 1 1 1 60 2R 19428994 19429013 GTCGTATCTGGTTCATCCTG 57 19428887 19428974 CAAAGGTTACATTTCTGCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG3515 FBgn0031431 FBtr0077750 1 1 1 84 2L 2552318 2552507 CCTCAAAGCATGACTACACC 58 2552253 2552271 ATAGTCTTTGCATGGCCAC 58 NA Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111 2 1 3 109 2L 5662968 5668824 GAGACCAACTAAAGCTCTCCA 60 5668956 5668974 TTGGTGTAACGGAACATGC 59 NA InUTR Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 3 4 4 62 3L 15486595 15486615 TGATCAGTTTGTACTAACGCC 58 15486415 15486571 TCCATGATGGACATGCCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Eig71Eb FBgn0004589 FBtr0075571 3 1 1 70 3L 15643376 15643456 TTGTATATTGACCCTTGAGCG 58 15643488 15643506 TTTATTGTGCAAGGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7261 FBgn0027509 FBtr0077829 1 1 1 117 2L 2150787 2150862 GAATCTCTTATCAAGTATGCCTCC 59 2150937 2150956 CGTTTAGTAGATGCTCCTCG 58 NA Drosophila melanogaster 61 CG15673 FBgn0034639 FBtr0300355 2 1 1 81 2R 17497452 17500297 ATGATAGGTGTAATCATCGCCA 59 17497392 17497410 ACTCGTGGAGAACGTTCTC 59 NA Drosophila melanogaster 61 usp FBgn0003964 FBtr0070346 1 1 1 60 X 1933747 1933765 TGTAAAGATGAAGCGGCTG 58 1933705 1933723 TATGATGGCCTTCAAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 2 2 2 128 3R 19198716 19198787 AATGAACCTTTGCACACCA 58 19198879 19198897 TCGATAGCCAGGATCACAG 58 NA InUTR Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 2 1 1 218 X 373091 373153 AGACCCTCTTCATCTTTCGT 58 372892 372913 GCGAATTGTACTCTTCTTACAG 57 NA DesignNoJunction Drosophila melanogaster 61 mal FBgn0002641 FBtr0077306 1 1 1 179 X 20302546 20302626 ATTTCCAGACACGTCTTTGG 58 20302768 20302786 GAATCCCACAAACGAACCC 59 NA Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 2 2 2 139 X 20293017 20293099 AATTACTGCTATCGCTGCG 58 20292896 20292914 AGAAAGTAGTCCGCCTGAG 58 NA Drosophila melanogaster 61 CG14225 FBgn0031055 FBtr0074757 3 1 1 190 X 19567494 19568547 CTAGGTACGGAACCAAAGTG 58 19567323 19567342 GTAGCTCTCCAGGTAAATCC 57 NA Drosophila melanogaster 61 CG32532 FBgn0052532 FBtr0074778 1 1 1 80 X 19432773 19432794 GCATTATCCGGATATTTACTGC 57 19428379 19432733 TGAAACCAGACTTGAATCCG 58 NA Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074584 3 1 2 80 X 18153248 18153267 GAATGGGTTGTGAAATGGGT 58 18153124 18153206 CGACGAGATTGTTCTTTCGG 59 NA Drosophila melanogaster 61 Dhc16F FBgn0013809 FBtr0074509 3 1 1 80 X 17959718 17959794 CCAAGACGATATTTCGAGCC 58 17959835 17959855 ATGGATAGTAGTTGACCTCGT 58 NA Drosophila melanogaster 61 CG4653 FBgn0030776 FBtr0074321 2 1 1 232 X 16598127 16598147 CCGGTTCAGTCATATTCACAC 59 16598340 16598662 GATTTAGCTGGGTAGCTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG9981 FBgn0030746 FBtr0074304 1 1 1 80 X 16297173 16297192 GCTCTAAAGGAGGGATTGGA 58 16297041 16297133 CCTTATGACAGTTACTCTGGCT 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 1 3 3 80 X 14143260 14143278 GAAACGTGAAGCTAACCGA 58 14143319 14143417 ATCCCTTCATATGCTCAAACTC 58 NA Drosophila melanogaster 61 CG12479 FBgn0040871 FBtr0073869 2 1 1 63 X 14045924 14045942 GACTACTCCAGAGGATCGG 58 14045879 14045897 CTTCACCAGGGAATCCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15753 FBgn0030491 FBtr0273441 3 1 1 154 X 13415078 13415096 TGACGCAAACAAGTCTCTG 58 13415214 13416802 GACAAACAGCGATTCCCTC 58 NA Drosophila melanogaster 61 Tim9a FBgn0030480 FBtr0073775 1 1 1 92 X 13279621 13279704 ATTCCGAGGAGAAGTGCTC 59 13279758 13279778 CAATAACCTGGAACTCCTGGA 59 NA Drosophila melanogaster 61 CG32667 FBgn0052667 FBtr0073474 1 1 1 95 X 11034254 11034272 ATCGGTCACGTTCGTACTC 59 11034109 11034127 GTCTTGAACTGATGCCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12643 FBgn0040942 FBtr0071481 3 1 1 60 X 10158967 10158985 CACCCAGGTCAACATAGGG 59 10158925 10158947 CAAACAATAGCGATAGGATACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nek2 FBgn0029970 FBtr0071142 1 1 1 60 X 7785365 7785385 ATGAACTACGATGAACTGGAC 57 7785325 7785344 GAACACTGATTTCCGAAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4151 FBgn0029770 FBtr0070779 1 1 1 122 X 5396242 5396260 GAGGAGGATCTGCCTTGAC 59 5396346 5396364 CACTGGTTAAGCGGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 2 2 2 121 X 1362208 1362291 GCATCGTTAAGGCCATCAC 59 1362376 1362394 CTCCTTCGTCTCTTCCACG 59 NA Drosophila melanogaster 61 Rbf FBgn0015799 FBtr0070146 3 1 1 80 X 694210 694230 AGCGTTTCCGCATTATTATGG 59 694088 694172 CATGCAGAGAAATGTACTTGGAG 59 NA Drosophila melanogaster 61 CR41540 FBgn0085797 FBtr0114251 1 1 1 60 U 8839351 8839369 AGGACTGAAGTGGAGAAGG 58 8839309 8839327 TAGGACCGACTAACTCGTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34291 FBgn0085320 FBtr0112487 3 1 1 84 3R 22251129 22251147 GAAGGAGGGTAACAAGTGC 58 22251063 22251081 CAGATTGACGCTTGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 2 4 4 80 3R 21448132 21448153 GATCAATATTCAGCCGGATGAG 59 21448013 21448094 ATCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 Trf4-2 FBgn0039251 FBtr0084718 2 1 1 60 3R 20751840 20751859 TCAACGAGGTCTACAACTCC 59 20751881 20751900 CTGATCACCATTAGCGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3308 FBgn0038877 FBtr0084102 3 1 1 83 3R 17098143 17098216 CTAGACAAATTCGAGAATCTTCCG 59 17098083 17098102 CCGGTCTAGGTACTTAAGCG 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 2 4 4 80 3R 16883425 16883517 CAACAAAGTAGTGCCTTTGTG 58 16883365 16883384 CCGTACTTGTCCAGAAACAG 58 NA Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083699,FBtr0083698 2 2 2 60 3R 14733036 14733054 TATGACGGAGAAGATGGGC 59 14733076 14733096 CATCTCCATGAAGTCCATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpsf73 FBgn0261065 FBtr0083690 1 1 1 85 3R 14487467 14487546 ATCTGGGCAAATACACGGA 59 14487400 14487418 CTCTAGAGTGCTCAGCGAG 59 NA Drosophila melanogaster 61 DNaseII FBgn0000477 FBtr0083538 1 1 1 82 3R 13845229 13845806 ATGTAGATTGGTGGCACCT 58 13845852 13845870 GTACTTCAAGCCACTGGTG 58 NA Drosophila melanogaster 61 CG17560 FBgn0038450 FBtr0083330 1 1 1 94 3R 12444425 12444443 TACACCTACACCAAAGCCC 59 12444501 12444574 GTGGACATTATGATCGCCG 58 NA Drosophila melanogaster 61 CG17562 FBgn0038449 FBtr0083329 1 1 1 81 3R 12441253 12441273 TGTGCTAATTAGACCAAAGCG 59 12441316 12441390 CAGCAGTTCAAATACCGCA 58 NA Drosophila melanogaster 61 CSN5 FBgn0027053 FBtr0083292 2 1 1 103 3R 12296150 12296224 GACAACACAATGATTGTCATGG 58 12296287 12296306 ATGTAGGCGGTCATGTACTC 59 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 3 2 2 87 3R 11789811 11789897 AAAGAAGAGATCCGCAAAGC 59 11789947 11789965 CTCATAGCTCCAGTGTCCG 59 NA Nonspecific Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 2 1 1 85 3R 11659805 11659826 GAAATGGACAATGATGAACAGG 58 11659640 11659759 TATATTGCGGGCTTTGGAG 57 NA DesignNoJunction Drosophila melanogaster 61 mthl12 FBgn0045442 FBtr0082746 3 1 1 80 3R 9179837 9179856 TAAGGGAACAGTTTCAGCCA 59 9179897 9179974 GTATGGATCCGTCCTTTAGGA 58 NA Drosophila melanogaster 61 CG14384 FBgn0038097 FBtr0082731 3 1 1 190 3R 8792187 8792282 TTAAACATTACCAGGTCCGC 58 8792016 8792034 ACTTCTTGGCGAATCTGGT 59 NA DesignRelaxed Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 3 2 2 129 3R 8229471 8229491 TCCCAAGTACTTTGAGAACCC 59 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 Sfp87B FBgn0259975 FBtr0300319 2 1 1 60 3R 8099078 8099098 AGTGCAACGCTATATCTATGG 57 8099116 8099138 GTATTTGTAGTACGTAGGAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tk FBgn0037976 FBtr0082488 1 1 1 89 3R 7821152 7821170 CGGTCAATTCCTTTGTGGG 59 7820878 7821102 TCAAGTCATAGGAATCGGAGAG 59 NA Drosophila melanogaster 61 CG10535 FBgn0037926 FBtr0082420 3 1 1 85 3R 7480174 7480194 GAAAGAGGTGGACCTACTGTC 59 7480241 7480327 GGAATGTCTTGCCAGTCCT 59 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082306 2 1 4 80 3R 6602946 6602965 CGAAAGTGGATTTACGACCC 59 6600774 6602906 GTTCTCTTCGTTCTCGTAACTG 59 NA Drosophila melanogaster 61 betaTub85D FBgn0003889 FBtr0082046 2 1 1 124 3R 5235416 5235434 ATTCCGTCTTGGATGTGGT 59 5235251 5235269 GATCTTCGAGATCAGCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543,FBtr0300544 3 3 3 142 3R 4544083 4545533 CTTTCAACAAGGCTGGTCG 59 4545639 4545657 TCAGGTAAAGGGCGATCTG 59 NA InUTR Drosophila melanogaster 61 CG3223 FBgn0037538 FBtr0081785 1 1 1 94 3R 3835344 3835435 CGAGTTGGAGATCATCCAC 57 3835493 3835511 TCTGAAAGCAGTGGATCAC 57 NA Drosophila melanogaster 61 CG1024 FBgn0027514 FBtr0290212 3 1 1 156 3R 2205668 2205749 TCTGAACACGAAACACGAC 58 2205530 2205553 CAGATGCATAAAGTAGTGGTACTG 59 NA Drosophila melanogaster 61 RpL35A FBgn0037328 FBtr0078769 1 1 1 183 3R 1291673 1291691 ATGTCTACAAGGCCGAGAC 59 1291440 1291526 GATGGGTACAGCATGATGC 58 NA Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 3 2 2 152 3R 359083 359101 AGAATGAGGCGTTCCTAGC 59 359277 359296 AAAGGCTAAGGGAAGATGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Psi28S-1837c FBgn0082994 FBtr0113607 3 1 1 76 3L 5757108 5757126 GCAGAGATCAACAGTGTCG 58 5757050 5757069 GTGGACAACTTTAAAGACCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1837c FBgn0082994 FBtr0113607 1 1 1 60 3L 5757151 5757171 GATTGTCTGCTGCCTTAACTC 59 5757111 5757130 CACTGTTGATCTCTGCAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111147 1 1 3 110 3L 24530402 24530504 AGGAGTAACGGCGTTACTG 59 24530576 24530596 CGACGGATCAATGTTTGACTC 59 NA InUTR Drosophila melanogaster 61 CG32450 FBgn0052450 FBtr0078501 3 1 1 80 3L 22323246 22323323 GTGCGGAGTATGCATACAG 58 22323365 22323385 ACCGTACTTGTCTTTCATACG 58 NA Drosophila melanogaster 61 CG7519 FBgn0037087 FBtr0078353 1 1 1 124 3L 21486447 21486532 CACTTTAATCTCATCACCAGCG 59 21486617 21486635 ATATCATCGGTAAGCCGGC 59 NA Drosophila melanogaster 61 CG9472 FBgn0036874 FBtr0074982 1 1 1 60 3L 19478372 19478390 AAGGTCTGGTACGATCCTC 58 19478330 19478348 CGATCATTGCATCCACCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14096 FBgn0036871 FBtr0074986 3 1 1 84 3L 19460048 19460121 ATCCGCCGTTGTTATTCTG 58 19459982 19460000 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG9629 FBgn0036857 FBtr0075017 1 1 1 91 3L 19261550 19261956 CCTACCAACATGTTGGCAC 59 19261477 19261495 GAGGACGATGAGTAGCTGG 59 NA InUTR Drosophila melanogaster 61 CG13725 FBgn0036708 FBtr0075248 2 1 1 60 3L 17318429 17318447 CGTGCTCTGCCTTATTGTG 59 17318387 17318410 CCAACAGAAGAGATCTAATATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Papst2 FBgn0036695 FBtr0075279 3 1 1 104 3L 17037005 17037079 ATTCTGTTTGGAGCATCCC 57 17037147 17037165 CCACTACTCCTCACCAGAG 58 NA Drosophila melanogaster 61 Papst2 FBgn0036695 FBtr0075279 2 1 1 104 3L 17037004 17037079 CATTCTGTTTGGAGCATCCC 59 17037146 17037164 CACTACTCCTCACCAGAGC 59 NA Drosophila melanogaster 61 CG4169 FBgn0250814 FBtr0075309 3 1 1 88 3L 16577758 16577776 AACAAACTGGTGGTAGCCA 59 16577883 16577902 TAGGACTCGTTTCGTGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 2 4 4 66 3L 16346789 16346807 CATCATCAACTTCACCCGG 58 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10516 FBgn0036549 FBtr0075512 1 1 1 123 3L 15962651 15962734 AAGTACCGAGAAACCGACG 59 15962821 15962839 ACATCTCGTGGACACTAGC 59 NA Drosophila melanogaster 61 Eig71Ek FBgn0014851 FBtr0075575 2 1 1 122 3L 15654389 15654470 GCTGTTGGTTCTTTGTATCCT 58 15654549 15654572 GTCTCATCAAATCGTCCTATTCTG 59 NA Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 2 2 2 114 3L 14023964 14023982 CAAGTCCAAGTATCCCAGC 57 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 SRm160 FBgn0036340 FBtr0075883 3 1 1 92 3L 13031676 13031694 TTTCAGCGATCCAATTCGC 59 13031749 13031838 GTTGTTGAAGCGTCTTGGAG 59 NA Drosophila melanogaster 61 CG10748 FBgn0036327 FBtr0075900 1 1 1 60 3L 12964545 12964563 TGGAATTGGGAAAGGATGG 57 12964503 12964521 TCGTAGTCACTCATCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14135 FBgn0036193 FBtr0290309 1 1 1 80 3L 11685394 11685416 CAAGGATCATGTGGAGATAATCG 59 11685453 11685536 CGCTTTAAGGAGCATATTTCGA 59 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076134 3 1 2 138 3L 11641408 11641501 GCTTTAATAGTAGTTACTGCGC 57 11641232 11641251 AGATCTCGTGCTTCAATGTG 58 NA InUTR Drosophila melanogaster 61 CG42521 FBgn0260396 FBtr0300668 1 1 1 80 3L 10616548 10616620 GGTTACACAAAGGCCAAGC 59 10616486 10616507 TTACATGTCGAAGACTCCTCTG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 1 12 12 87 3L 9773789 9773876 CCTCATGAGATCTTTGTGCA 58 9773926 9773944 CATACTTGATCCAACGGGC 58 NA Drosophila melanogaster 61 CG6372 FBgn0035915 FBtr0076638 2 1 1 85 3L 8611591 8611668 GATTGCCTGTCAATATCCGAG 59 8611715 8611733 CTTGACCATGTCACCTGGT 59 NA Drosophila melanogaster 61 CG32406 FBgn0052406 FBtr0077037 3 1 1 81 3L 6013197 6013216 TCCGATGAGGATAATTCGCC 59 6013260 6017746 TTGTCAAGCGTTTGACCAG 59 NA Drosophila melanogaster 61 Cralbp FBgn0035636 FBtr0077117 2 1 1 116 3L 5779550 5779569 ACAACGATCAAAGGAATCGA 57 5777553 5777574 CATATTCTGCTTTCCTTCTTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10591 FBgn0035621 FBtr0077128 1 1 1 89 3L 5592753 5592774 GAAATCCGAAGTACATCATGAG 57 5592624 5592642 ATTTCACCAACGAAGCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32237 FBgn0052237 FBtr0073356 2 1 1 76 3L 4852426 4852445 TAGATTCCATCGTCAAAGCA 57 4852293 4852311 GGCAATAAAGATGCAGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14984 FBgn0035480 FBtr0290224 2 1 1 106 3L 3951476 3951760 GAATCGAAGAGTCTCGTCAC 58 3951389 3951407 ATATCCGATACCGTGGAGC 58 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 1 2 2 80 3L 3179413 3179956 ATTTCTTGGCTGGAATCATGTC 59 3179995 3180015 GTGAATTATGTGGCCATCCAG 59 NA Drosophila melanogaster 61 CG1246 FBgn0035360 FBtr0072938 3 1 1 85 3L 2649198 2649270 ATACAACGTCCATGAAAGATGC 59 2649316 2649334 GGGCTCCATTAGAGTCCAG 59 NA Drosophila melanogaster 61 Bro FBgn0013755 FBtr0072760 3 1 1 63 3L 1648246 1648264 GCAGGATTGCGATTTCGAG 59 1648288 1648309 GTTCATGATGAAACTAGAACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34056 FBgn0054056 FBtr0100833 1 1 1 81 3L 896479 896498 GGAAGGCCCTAGAGTATGTG 59 896539 896616 ATCACAAAGGTGTCATCATCTG 58 NA Drosophila melanogaster 61 CR41440 FBgn0084049 FBtr0111304 2 1 1 60 2R 619182 619201 AACGACAACACAGAGAAGGA 59 619223 619242 CTACGATCCTGGTTGAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0072177 3 1 2 147 2R 19951088 19952266 GAAATCGAGGTGGACAGCT 59 19952374 19952516 CCTGAAATGTTTGATGGTTCGT 59 NA Drosophila melanogaster 61 CG11388 FBgn0034959 FBtr0072162 1 1 1 60 2R 19911374 19911393 GAAGGATCACGGATACTCAC 57 19911415 19911434 TTTAATATTGCCCTCGCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5591 FBgn0034926 FBtr0072134 2 1 1 97 2R 19786773 19786850 AGGTGCCTGTGATATGCAG 59 19786911 19786929 GTCTCCGCAGGTACTACAC 59 NA Drosophila melanogaster 61 Obp58c FBgn0034769 FBtr0071920 2 1 1 293 2R 18594058 18594132 CTGATTTGGTTTGCTGGTG 57 18593783 18593804 CCTTTCAGTGAACAAACTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3290 FBgn0034711 FBtr0071782 3 1 1 116 2R 18094906 18095076 ATTGAGCAGAACCTACTGC 57 18094808 18094827 TTTACTGCTGCACTTACTCC 58 NA Drosophila melanogaster 61 CG30401 FBgn0050401 FBtr0071731 1 1 1 120 2R 17874035 17874053 ACCAAGGCCGGAATATCAC 59 17873878 17873951 AATAGTTGGCAGAACCCGT 59 NA Drosophila melanogaster 61 CG4363 FBgn0034663 FBtr0071740 2 1 1 101 2R 17722058 17722138 GATTCCAGCAAGGATTCCA 57 17721975 17721996 GGATTTCACATAGCAATACGAG 57 NA Drosophila melanogaster 61 CG10440 FBgn0034636 FBtr0071692 1 1 1 83 2R 17449352 17449370 GACTTCTGATTGCCGAGGA 59 17449085 17449305 GCTTAATCATCGGCTCCAC 58 NA Drosophila melanogaster 61 CG30283 FBgn0260477 FBtr0300950 3 1 1 189 2R 17427783 17427861 TCACAAATCGTTTCGTACTGAC 59 17427561 17427579 GAATAGTGCACTCGCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30283 FBgn0260477 FBtr0300950 2 1 1 188 2R 17427783 17427860 CACAAATCGTTTCGTACTGAC 58 17427561 17427579 GAATAGTGCACTCGCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30291 FBgn0050291 FBtr0071549 1 1 1 80 2R 16896814 16896832 ACAGGAAGATTAGCAACGC 58 16896701 16896770 AGTTGATATTTGTCCGGGC 57 NA Drosophila melanogaster 61 CG16868 FBgn0034498 FBtr0086302 3 1 1 90 2R 16173896 16173982 CAAGATACAGGAAATCTTTGACTCC 59 16173830 16173848 CACGTTGCTATCGTTGCTC 59 NA Drosophila melanogaster 61 CG18367 FBgn0034460 FBtr0086469 2 1 1 80 2R 15524307 15524325 GGCTGAGACACTTCGAGAG 59 15524369 15524744 AGAAGATTTGAGGCAGCGA 59 NA Drosophila melanogaster 61 CG15107 FBgn0041702 FBtr0086600 1 1 1 100 2R 14859262 14859347 GATTATCTACGAAGTCGCGGA 59 14859182 14859200 AAATGCGTTTCAGCTGCTC 59 NA Drosophila melanogaster 61 CG6472 FBgn0034166 FBtr0087046 3 1 1 143 2R 12771587 12771605 ACTTCGTGGAGAGCATAGC 59 12771711 12771787 AGAATTTGCCACGAATCCTG 59 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 2 3 3 102 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471727 12471745 GATCCGAAAGATCCTGCTC 57 NA Drosophila melanogaster 61 CG13018 FBgn0040751 FBtr0087581 3 1 1 114 2R 10044827 10044845 ATCTCAAGATGTGCCTCCT 58 10044731 10044749 TAGAAGGTATTGCGGAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18371 FBgn0033893 FBtr0087599 3 1 1 69 2R 9916437 9916456 CTACTGAATATCGGCAGTCC 57 9916488 9916506 AAGTGATCTCCTTGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30062 FBgn0050062 FBtr0087706 2 1 1 60 2R 9333539 9333558 CAAATCAGCGATCGCTACTG 59 9333498 9333518 CGTTGAATGCATAGTATTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17724 FBgn0033802 FBtr0087771 3 1 1 164 2R 9072417 9072436 TGGAAATGTCTATCAGCTGC 58 9067606 9072290 TATATCGTAGCGGCAACAC 57 NA InUTR Drosophila melanogaster 61 dgt5 FBgn0033740 FBtr0087948 2 1 1 98 2R 8355064 8355148 CAAGACCAAGAACATTCAAACC 58 8354987 8355005 TTATTCAGCGACTCCAGCT 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 2 4 4 80 2R 8192773 8192794 CTGACTGTAAACGATGAATGCA 59 8192620 8192732 ACTTTCGGCGGGAATACTC 59 NA Drosophila melanogaster 61 CG13197 FBgn0062449 FBtr0088078 1 1 1 80 2R 7579072 7579482 CTGAATCAGCATGTCAACG 57 7579526 7579544 CATATCGGGTACGATCTGC 57 NA Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082 2 1 2 140 2R 7578239 7578325 CAGCGAAGCTCCAATAACC 59 7578026 7578045 GGTGATCGGATTGAGTACCT 59 NA InUTR Drosophila melanogaster 61 CG12391 FBgn0033581 FBtr0088205 1 1 1 151 2R 7037009 7037116 ATTACCTCGAGGACGATGC 59 7036876 7036896 CTTATTGCTTGATTCCTGGCA 59 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214,FBtr0300578 1 2 2 92 2R 6602946 6603063 AGTTTATTCTGTTGGCTGTCTG 59 6603116 6603134 AAGGATGAGCAGGTTCACC 59 NA Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 1 1 1 95 2R 6199253 6199417 ATGCATGATTTCTGCTGCG 59 6199176 6199194 TTCATCCGTCTCGTATGGA 57 NA DesignNoJunction Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 1 2 2 80 2R 4014509 4014583 ACCTCTTCAGCTTGAAGGAC 59 4014448 4014469 TCAACACTTTGATAGACTCCCT 58 NA Drosophila melanogaster 61 CG11127 FBgn0033178 FBtr0088975 3 1 1 60 2R 3351474 3351493 TTCAGAGGGACTCCATTGAG 58 3351516 3351534 TGATAGCTGGTGAAGTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 2 1 1 260 2R 2703833 2703853 GTGCTAGCTATTTACGATGCC 59 2704075 2704147 GTACACCAACGAGTTGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Dpit47 FBgn0033083 FBtr0086146 2 1 1 123 2R 2548741 2548817 ACAAGATGAAGAAGCTCGAG 57 2548637 2548655 TCGTCAAACTTAATGGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0086012,FBtr0086008,FBtr0086010,FBtr0302439,FBtr0086009 1 6 6 80 2R 1981650 1982072 CCACTATTCCGCTACTACCT 58 1981589 1981610 CCAACTGATTGTACGTTAAGGA 58 NA Drosophila melanogaster 61 Cyp6t2Psi FBgn0041336 FBtr0081529 2 1 1 80 2L 21283280 21283300 AACCACCAACTTAGCTATGAC 58 21283047 21283239 TCAGATCGATTGTGGATCGT 59 NA Drosophila melanogaster 61 CG15216 FBgn0032978 FBtr0085940 2 1 1 114 2L 22161311 22161697 TATCGAAACTTCTCGGCAG 57 22161774 22161793 TTGCTCCTTGGAATAATGCT 57 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 2 3 4 98 2L 22141682 22141701 TGATTGTAAGCCTAGATCGC 57 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262,FBtr0085931 2 2 2 60 2L 22015688 22015707 AGTGTCGAGAAACTTCATGG 58 22015726 22015748 CGAGATAACTGCTTGACTATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33827 FBgn0053827 FBtr0091831 1 1 1 60 2L 21474874 21474893 CGCTCAAGACTTTAAGACGG 59 21474916 21474934 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33808 FBgn0053808 FBtr0091812 1 1 1 60 2L 21434123 21434145 CTAGAATTATTCCGCGTCATCTG 59 21434164 21434183 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 3 4 4 90 2L 21255232 21255250 AGGAACTTCGGTCAAGTCG 59 21255302 21255546 CATGATTTCCTGCAGTAGTGG 59 NA Drosophila melanogaster 61 CG2608 FBgn0032870 FBtr0081384 3 1 1 142 2L 20645900 20645918 AAACAAGCTGATCAACCGC 59 20646107 20646125 TGGCGTTGAGTATTGAGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 drl FBgn0015380 FBtr0081195 3 1 1 81 2L 19207429 19207448 ATCCCTATGAGATGGAGCAC 58 19207492 19207634 ATGGTGAAGAGCTCATCGG 59 NA Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081165,FBtr0081164 1 3 3 175 2L 19123219 19123237 ATCTACACCATTCTCGGCC 59 19122759 19122777 ATAAAGCCGAACTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10561 FBgn0002036 FBtr0081155 3 1 1 255 2L 19114566 19114642 GCCAAGTTTGGAATTAGACAC 57 19114921 19114939 ATTGTATAAGCTGCGCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 2 5 5 80 2L 17442579 17442666 GGATACGCCATATCGTCCT 58 17442517 17442537 TTGATCTCCAGTGTACAGACG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080905,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080906,FBtr0080899,FBtr0080907,FBtr0080900 3 16 16 91 2L 16770755 16770773 AAGATCAGGTTGTGCAGAC 57 16770826 16770919 GAATTTACCGAAACGAGAGGA 58 NA Drosophila melanogaster 61 mRpL4 FBgn0001995 FBtr0080843 1 1 1 83 2L 16328460 16328480 AGATGCAGAGTTCCTTAAGGA 58 16328335 16328416 GGGAACATATGGTCTTCGTC 58 NA Drosophila melanogaster 61 CG34167 FBgn0085196 FBtr0112358 2 1 1 292 2L 16003393 16003411 TTTGGATCCTGTGGGTCTG 59 16003119 16003137 AAATAGAAAGGTGGCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7110 FBgn0032521 FBtr0080500 3 1 1 80 2L 13403341 13403479 TTTCTCAAGCACCAGATGC 58 13403522 13403541 AGTTGGTTGTGTTGTCTTCC 58 NA Drosophila melanogaster 61 CG6614 FBgn0032369 FBtr0080267 3 1 1 80 2L 11645852 11645929 AAAGTTGAAGCGCTGTTACC 59 11645791 11645812 TATTTGAGAGCTTCATCACAGC 58 NA Drosophila melanogaster 61 CG14921 FBgn0032345 FBtr0080227 3 1 1 117 2L 11121444 11121462 TTCTTTGAGCGTCATCTGG 57 11121225 11121243 ACATCTCAGGCCATAAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Ip259 FBgn0025366 FBtr0080017 1 1 1 184 2L 10408379 10408751 GAAGCAAGATCTGGTCTACAG 58 10408897 10408915 AAGAGTTTGGCCTTGATGC 58 NA InUTR Drosophila melanogaster 61 nmd FBgn0005322 FBtr0080065 3 1 1 85 2L 10303593 10303667 AGCAGCTTAAGAGGCTAGC 59 10303526 10303546 ATGTGACGCAATCATAAGCTC 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 3 4 5 61 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896701 7896719 CAATCCAAGAACAGGACCC 58 NA DesignRelaxed Drosophila melanogaster 61 Spn7 FBgn0083141 FBtr0079470 3 1 1 104 2L 7582943 7582961 GCTCGTCCTAGAATCTGGT 58 7583029 7583100 GTAAGAACACCTGTTGCCG 59 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 2 2 2 87 2L 6640925 6645981 TGGAAGCAAGTATACCTCGT 58 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 CG8891 FBgn0031663 FBtr0079048 1 1 1 92 2L 4978702 4978788 GGGACTTTGGATGGGATCC 59 4978628 4978649 GATGGGAAATGGTGTTCTTCTC 59 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 3 1 3 75 2L 4879194 4880309 TTAACGACTCACACGGGAG 59 4879137 4879155 TCAGATAGTCCTTCACGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 1 2 2 80 2L 3865417 3865501 TTCCGCATCATCAAGAACAC 59 3865544 3865562 TCGAATGGTCCTAAACCCG 59 NA Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 1 2 2 164 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466925 3466943 ACAATCTCGTTGTCGACCA 59 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 1 3 3 68 2L 1985519 1985537 CCGATACCGCTACTACGAC 59 1985400 1985489 TTCTTCAGATCCTCGATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Gr21a FBgn0041250 FBtr0078006 2 1 1 107 2L 781951 781969 AACCTGTCGCAGTACTTCC 59 782039 782133 GTTGATGTACCACAAGCTGC 59 NA Drosophila melanogaster 61 CG31921 FBgn0051921 FBtr0078096 3 1 1 60 2L 332051 332070 CTCTGATATCGGGACTCTGG 58 332010 332030 TTGTCGCATTAACTCGTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 3 1 1 62 2L 272506 272572 GGCATATGCGACAAGAAGG 59 272462 272485 GGAGCAATTACGACATATCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11490 FBgn0031233 FBtr0078125 2 1 1 102 2L 207624 207721 CGGGAAACATCCTCTTCAC 58 207786 207805 TATTCCACCAAGGAAAGGGA 58 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 3 4 4 80 2L 123790 123873 CTATTACGATCCTATCATTCCCG 58 123732 123750 AGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416,FBtr0113415,FBtr0078163,FBtr0078164 1 4 4 80 2L 34720 34744 CTACGATGAGGATATTAATAGCCAG 58 34280 34567 TGTTCTGCCCTTTGAGGAG 59 NA Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300690 3 1 2 60 2L 8571 8669 ACAGGATGATAAATCGACGGA 59 8688 8709 GTCTTCGGTAGTTATGTGTAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 3 3 8 121 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119968 119988 CTGCTATATTGAAGGGAGCTG 58 NA InUTR Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 2 4 4 80 2L 123790 123872 TATTACGATCCTATCATTCCCG 57 123731 123750 TAGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 3 5 5 110 2L 155731 155750 ATCTCCGACTTTCAGGAGTG 59 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 1 2 3 80 2L 199735 200131 GCCAGTCTGAATGATTCTACG 59 200172 200191 ACCTCGCATTAAATGATGCT 58 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 3 3 5 91 2L 849927 849946 GAACATGACCATCGGATCCT 59 837335 837356 CCATCGATATGGATTTCACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 1 1 1 100 2L 860338 860356 AAAGGTCCTAACGGAGGTC 58 860774 860792 TCACATTGTCCGTGAGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943 3 1 2 82 2L 1359691 1359772 GAAGATCTTCGTCCCTGCA 59 1359627 1359645 TCATATTGGAGGGACAGGC 58 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 2 4 4 88 2L 2224613 2224633 AAATCTACCATCCAGACGGAG 59 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 1 1 1 60 2L 2287695 2287713 TGAATCCCAACGATAGGCA 58 2287591 2287612 GTATAGTTAAGCCAGGCATTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 2 1 1 71 2L 2696062 2696081 ATACAGCGATACTTGAACGT 57 2695952 2695970 GAGATGGAACTTGGACGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 1 1 1 229 2L 2768069 2768087 AGTTCGGACTGCATTAGTG 57 2767739 2767760 GCTGTTGTGGTAAATAATTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 2 4 4 81 2L 2792363 2792493 TTCACCTTTAAGAGTTTGCCC 58 2792302 2792320 TCGAGAAGCGATCGAAGTC 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 2 5 6 81 2L 3071760 3080664 TCATGTCCAAAGAGCTGGA 58 3071697 3071715 GTCTTCTCTAGCGTTCCCT 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 3 8 10 81 2L 3500688 3500706 AAGCTCTTCAGCAACAACG 59 3500563 3500645 GGGTGATAATGTCTTGTTGCA 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 3 3 3 92 2L 3722559 3722659 CTTTGAAATATTGGTGCGCT 57 3722713 3722732 CTAAGCGTCGCTATGTAGTC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 3 4 11 87 2L 5004201 5004626 ATACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 3 5 5 88 2L 5155461 5155480 GTTTCTGTGAGAAGACCCTG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 1 4 4 77 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 nompC FBgn0016920 FBtr0300012 1 1 3 90 2L 5360392 5362002 CTACTTCAGTGACGGACCC 59 5362056 5362074 ATTGATGTCCAGGGTGGTC 59 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 2 4 4 111 2L 5984933 5985036 ACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251 2 1 2 156 2L 6343932 6344167 TGAATGGAAGGTCTTTGGC 58 6344347 6344365 CGTGATGAAGTCATCCTCG 58 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262 2 1 2 81 2L 6495090 6495247 GCACCTCCAGAATAGACGT 59 6495291 6495310 CTCCACGGCAATCTTATTCC 58 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0079405 3 1 2 101 2L 7182809 7182827 GGAAGATAGCGAGGACGAG 59 7182889 7183173 TACTCAATGATCTTCCTCTCGC 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 2 4 4 85 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499745 7499824 GACTGCAGGTATTTAGATTGGG 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 3 4 4 80 2L 7649009 7649028 TTGAGGACTTAGTCCTTTGC 57 7648880 7648969 GCTTAATTGTACTGAAACAGGG 57 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 1 4 5 80 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682043 7682121 CTGTTCCATCTTGAAGATATGTCC 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 3 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688026 7688046 CTTAACAACAGCTTTGAGCAG 58 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 1 4 4 80 2L 7729222 7729243 GATGAGTTGCAACAATAGTTGG 58 7729109 7729185 GGATCAACTCTATAGTCATCGAC 58 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 1 2 2 81 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195911 8195930 GTGGGTGTAAATGATCTGCA 58 NA Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 2 1 1 89 2L 8376668 8376686 TACTGTCAGGTGGCATCAG 59 8376531 8376549 ACGTATCCTCTTGGCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 1 2 2 80 2L 9059738 9059758 CCCAGACCCATTATCAAATGG 58 9059586 9059698 CTCCCATTCGTTCACTATGTG 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771 1 1 4 80 2L 9162245 9162265 GGGAACACTGCTGAATAACTC 59 9162305 9162379 TTCAAGATGCGTTGATCTTGG 59 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301039 1 1 4 111 2L 9135282 9135300 AACAATGACATCAACGCCC 59 9135375 9154667 CAAGGATTGCATATCGGGC 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 1 3 4 83 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519738 AGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 2 2 2 87 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571745 9571851 CTGATTATCCCTGTTGCGG 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 7 7 83 2L 10259082 10259102 TGTTGATATGTGGCTCAAGGA 59 10258906 10259037 ATCATGGTACCGGTTCTGC 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0290007 1 1 2 95 2L 10918980 10923156 AATGTCATAGTAACGCCGC 58 10918903 10918921 GTGACAAGTGAGCGTTACG 59 NA Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 2 2 2 80 2L 10999568 10999587 AGGCCATAATGATCATTCCC 57 10999440 10999525 CCCTCAACGTCCTAAAGTC 57 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 1 2 4 91 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404101 12404120 GAAGCTTCGAATTCGGAGTC 59 NA Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080395 3 1 2 80 2L 12695152 12696275 GAGGATAAGATGGGCATGAC 57 12696318 12696336 AATGCTGATGCCAATCAGG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 3 3 9 80 2L 13274311 13274331 AGCGTATCATACCGATAACTC 57 13274372 13274705 GGTAATTCTGGTAACCACCA 57 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 3 4 4 83 2L 15065452 15066951 GTTCCGATAGAACTGGTGTG 58 15065388 15065406 CAATAGCCTCCTTGACCGA 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 2 3 9 176 2L 15261625 15261726 GTGGAAATTGAATGCGATACGA 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 2 2 3 98 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511362 16511380 ATATCGGTGGCGAGTACTG 59 NA DesignRelaxed Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940 1 2 3 101 2L 16724132 16724150 CAAGCAGATCGTGATGCAG 59 16723889 16724070 AGGTATTCCCAATTGTGTACCA 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 1 14 16 81 2L 16774785 16774803 GACTCTGGATACCCAGCAG 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 3 3 16 80 2L 16777432 16779103 AAGATGCGCTACCAAATCC 58 16779147 16779165 CTCGATCAGAACCTTCGTG 58 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 1 2 2 87 2L 18082141 18082229 CATTTACCTTCATTGGCTGCT 59 18082278 18082296 CATTCGCATTTAGGGCCTC 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232 1 1 4 156 2L 19183446 19183523 AATAGGCCAAATCTGCCCT 59 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA InUTR Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 2 5 6 80 2L 19511368 19511440 CCCTGGTCTACAAGAATGC 57 19511306 19511327 GGATGCAGTTAAAGAAGATCTC 57 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 2 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569183 GGGTTTCTCTACATAGGTATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 2 5 5 83 2L 20355739 20355816 GACGCAAATACTCAGTCAGG 58 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089945 1 1 3 80 2L 20791278 20791297 CCAAGGAGAATCTCACCCTC 59 20790708 20791237 CACGCATGTAGCAAGTATAGC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 2 6 9 94 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882382 20882401 GAGTATGTTCTTCACGTCGC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 1 7 7 80 2L 21120172 21120285 CTGCCATAGGCATCATCTG 58 21120328 21120347 AAATGGGTTCTATGACACGC 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 1 3 7 141 2L 21125431 21126168 AATCATCACCTGACTCGGA 58 21126272 21126291 ATATCTGTGTCCGGATTGTC 57 NA Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0081498 2 1 2 95 2L 21166944 21167019 GAGTAGATATACAAATGCGACG 57 21166870 21166889 TGACTAAGTACGAGTTGCAG 57 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 1 3 4 82 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257158 21257176 GTAAGCTTGCAAGCTCTGC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 3 5 5 81 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111247,FBtr0111245 2 2 6 131 2L 22741818 22741957 AAATTGGTTGAGACGGCAG 58 22742102 22742175 TTCAATGTATTCACCCGCC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 3 4 5 83 2R 2503182 2503200 GGGAGCTGGAAGCTATCTC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 1 2 11 109 2R 2764805 2764823 AATGCTACAAAGTCCGGAG 57 2764020 2764732 TCATAAACATACCCGTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084,FBtr0111051,FBtr0111085 3 3 59 81 2R 3219878 3228061 TGATTGTGAACGTACCTCCC 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 1 5 5 80 2R 3371064 3371167 GGACTTTATGTGGGATATCGAG 58 3371005 3371023 CAAGTGCGATCTTTCTCGT 58 NA Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 1 2 2 80 2R 3383084 3383102 ATTTGCTGGACCTGTATCC 57 3382958 3383040 GTGGAGTGAATCTTTCCGT 57 NA Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 3 2 2 119 2R 3718956 3719036 TCTACCAAGTGGAGTACGC 58 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842 2 1 2 60 2R 3720636 3720655 CCCTACATTCCACACTACGA 59 3720677 3720750 CAACAGAGGTTCTTCCTGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 1 3 3 82 2R 3877500 3877518 ATACACGACGTGGTCTTCG 59 3877563 3877643 TCCTCGTCCCAAATCTTGAC 59 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 3 3 3 95 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877562 3877641 CTCGTCCCAAATCTTGACG 58 NA Drosophila melanogaster 61 Pbp49 FBgn0260398 FBtr0300659 3 1 2 60 2R 4018780 4018801 GGAAGGAAAGAAGAGGAATGTG 59 4018658 4018677 TTTATCGTTATGCATGGGCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 2 4 5 95 2R 4788973 4788992 TTTAGCCCGTAGAGTTCGAG 59 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 2 3 3 116 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150001 5150019 TGTTAAGAGCCCTCGAAGC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088420 3 1 3 134 2R 5997501 5997520 TGGTCCTACAACATTTCGCT 59 5997663 5997745 GTATTTCCTGAAATATCTCGAGGAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088347 1 1 17 180 2R 6182006 6182118 TACACCACCAAGACGAACC 59 6182260 6182360 ACCATACAACTTCTCGTCCTG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 3 4 17 107 2R 6181259 6181376 TGAGATCGGAGGTCAAGGA 59 6181662 6181681 GACACTTGTAGCGAATCACG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 1 5 5 105 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 2 4 4 81 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269384 7269466 CACCGTGATCAACCTTATCG 58 NA Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987 1 1 2 90 2R 8062452 8062470 GTTCGACGAATATGGTCGG 58 8062524 8063250 AATGTGCGTCTTTATGGCA 58 NA Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 2 2 2 80 2R 8447316 8447402 AGTGTACTATTCCGAGAACGAC 59 8447443 8447461 CGCAACTCGGTAAGAACTG 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 3 2 4 97 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464416 8464434 TCAAGCAGCTTTGATCTCC 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 3 2 8 89 2R 8505630 8505713 TTTCCTGAATACGATGGTCCA 59 8505764 8505782 TTCGGGATCTGGATTGCAG 59 NA Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 1 2 2 81 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512586 8512783 TCTCCGTATCTGTAGCACAC 59 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 3 2 2 96 2R 8825966 8826076 GGATCGGTTTCACAAAGCC 59 8826135 8826154 CGTCATGGAATCACTGTCCT 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 1 3 12 85 2R 9305328 9306504 AACCGCGATCTTCTGACTC 59 9305261 9305281 ATGATGATCGTGCGAAATCAG 59 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 2 4 4 198 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9876939 9876957 TATTCCAGGCCACCATACG 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582 2 1 3 134 2R 10039423 10040360 CAGCGAGAGTTCCAGTACC 59 10039307 10039325 ACCAGAATGTTCCTAGCGG 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089617,FBtr0089620,FBtr0089618,FBtr0089621 2 4 7 80 2R 10491537 10491555 ATAAACACAAGCGATCGGC 59 10490993 10491493 AATCGTAGTCAGACCTGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 3 4 7 93 2R 11652754 11660561 AATAATGTGTACCGAGGTGC 58 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 1 3 5 135 2R 11773780 11773798 ACCGTGATATACGAGACGG 58 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220 3 1 3 167 2R 12000415 12000434 ATCAAGACCAGGCTGATGAG 59 12002366 12002871 CTTGGGCATAGTTCTCCCT 58 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 1 2 5 85 2R 12216116 12216134 TTGTGGCAGTAGTAGCCAG 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 3 2 5 112 2R 12249021 12249227 TCGAGAAGTACTACTGCGAG 58 12249302 12249320 GTACTTGCAGAGGAACTCG 58 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 2 6 6 80 2R 12676157 12676302 CTACTACACTATAGCAGCCTCG 59 12676343 12676361 TCCAACTGCTTGATGGAGG 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628 1 5 6 84 2R 12900977 12901059 AAAGGCTACAGACGAGGAC 59 12900911 12900929 CTCCAAGTCATCCAAAGGC 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 2 5 5 182 2R 13400213 13400291 ACTTCTTGAGCCAATCTGG 57 13400436 13400455 GACTAAGGAACTCAGAGTGG 57 NA Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 1 1 1 135 2R 13405487 13405505 CTGTTTGGAGCCTCTCCTC 59 13405311 13405329 ATGTTCGTACGCTTGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 2 2 2 102 2R 13477485 13477505 GTAATAGTCCCACAGAGACAC 57 13477350 13477421 TGGGTGAGATTCTTCTCCA 57 NA Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 2 1 1 82 2R 13935656 13935675 TTCTGCTTATAGCCCTTGGG 59 13935770 13935790 TCCATCGTCTAAGTAAGAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 2 6 6 130 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175123 14175142 AATATTCCACTCGTCCTCGT 58 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 2 2 3 151 2R 14320264 14325081 GGCCTACAAGTTCCAGGAG 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0086660 1 1 4 144 2R 14520618 14520704 AATGCAGAGTTATGGCAACC 59 14520426 14520444 GACATTTACGCCTGATCCG 58 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0086660 2 1 4 145 2R 14520618 14520704 AATGCAGAGTTATGGCAACC 59 14520425 14520443 CGACATTTACGCCTGATCC 58 NA Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 2 3 3 60 2R 14546455 14546476 GTATCGATACGCTTTAGTCAGG 58 14546353 14546439 GAAAGTGCCTTGTATAAAGAGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 3 2 3 187 2R 14664325 14664413 TTCTTACACCAACAGACATGTC 58 14664159 14664177 GAAGACATGCAGCTTGTGG 59 NA InUTR Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 1 3 3 80 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010727 15010809 TGGCCACTAATTCAAAGTACG 58 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 1 3 3 89 2R 15280206 15280224 ACTATTGTGAGCGCTGAGG 59 15280075 15280156 GCTGAAATCGTATTCATCCTCG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 3 7 10 81 2R 15296039 15296060 GAGGATAGAAGATCCACTCCAG 59 15295915 15296001 GTCCTTAATTAGTTGCTGGACAC 59 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536,FBtr0086539 1 2 4 192 2R 15338964 15338982 GTTCACATCCAAGCTGGTC 58 15336055 15336073 AAGATCTGGCCGAAAGGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 1 2 2 80 2R 17103409 17103491 CTTCTACTGTGATCAGCACCT 59 17103349 17103370 GTAATCGATTGGAAGTGCAGAC 59 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 3 3 3 80 2R 17172236 17172255 ATCTATCAGATGTGAGCGGA 58 17172297 17172372 GATACATCAGCAGAATGGGC 58 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 1 3 3 136 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181862 ACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 3 4 5 180 2R 17202255 17202336 CCGGTATCTGGAAAGACCC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 1 2 8 80 2R 18618369 18618388 CCCAATAGCGCCTATATCAC 58 18618237 18618330 CTCGTAACCATTCTTACTAACGG 59 NA Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 2 2 2 217 2R 18935219 18935359 TGGCCACAAGATACATTGAC 58 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 3 2 2 100 2R 19245611 19245629 CCAGAAGACTCTGGACCAC 59 19245693 19245772 CGTCTGCAGTCTTGTTCAG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 2 3 3 80 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619489 19619573 CATCGTTGTACAATCCGTCC 59 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 3 2 4 80 2R 19797341 19799203 TATGGGTCGTACGATGACTC 58 19799242 19799264 CAGATATAGATTTGGGTCGATGC 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 2 4 4 80 2R 19940649 19940730 GATCTAATAGTCGGCATCGG 57 19940588 19940609 GTACGAAATGATCTCCAGTAGG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 2 2 2 105 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183364 20183440 CTGGAAAGCCTTTAGGTCC 57 NA Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 1 2 2 84 2R 20569794 20569812 CATAGTCGTAGGCACCCTG 59 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 1 9 9 80 3L 143207 143522 TTGTCCATACGCCAAATCG 58 143565 143584 TGTTCTCAATAGCTTCCGAC 57 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 3 4 4 126 3L 177071 177155 CCTCACTGAGACCATCGAG 59 176963 176981 GTAAAGCTCGTTGTGCCAC 59 NA Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 2 2 2 80 3L 205417 205436 GTGAATACGGTCAACGAGTG 59 203608 205378 CGTGATTATTTCCTCAACCTTCC 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 81 3L 301612 301630 GAGTCCTACGGTATGGGTC 58 301673 301769 AGAAGCTTATAGCTTCCTCGT 58 NA Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 2 2 2 162 3L 317402 317473 TGAGCCAGAACGAATCCTG 59 317599 317617 TCTCTACTTCGGTTTGCGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 2 2 6 98 3L 1024534 1024552 ACTAAGTTTGCCGTGTGGA 59 1024396 1024474 CTTAACCCAAATCTGCTTGGT 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 3 2 6 98 3L 1024533 1024551 CTAAGTTTGCCGTGTGGAC 59 1024395 1024473 TCTTAACCCAAATCTGCTTGG 58 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 2 2 2 140 3L 1312657 1312734 CAGTTTGGGTGATAGGGCA 59 1312535 1312554 CGTATTTCTCGATGAAGGCG 59 NA Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 3 2 2 82 3L 1317543 1317561 ATGAGGATTACGACTGGCA 58 1317604 1317680 CCATTTGATTGTATCATCGACC 57 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864 2 1 2 141 3L 1872467 1872596 GAGTTCAAAGCACAGTCGC 59 1871908 1872362 CTTCGACGGGCTAGATGAG 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858 3 1 4 97 3L 2127143 2127161 ATTTACTTCACGGCGAAGC 58 2126657 2127082 GTGTACTTGTAGCCCTTCG 58 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 1 4 4 70 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127,FBtr0072886 3 2 2 60 3L 2299244 2299264 CCTTCTTTCTGCAATGTTACC 57 2299773 2299793 TTAATAAGCGCCAAGATGTCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 3 4 4 80 3L 2498023 2498107 GGAAGATGTGAAGATAAACACCG 59 2498144 2498165 TCTGAGATCCAGCGATTTACTC 59 NA Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 3 2 2 95 3L 2600875 2600893 AACTCGCAAGAAGGGACTC 59 2600950 2601031 ACGATCTTGACCTTCTGTAGG 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 2 3 3 87 3L 2723386 2723471 GCTATAGTGGTGAAGCAGGA 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 2 3 3 80 3L 3227694 3227782 CTACTTCTCCAGGGAGAACC 58 3227823 3227843 GTGTAAATGGGCACATACTGG 59 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 1 1 2 240 3L 3416817 3416835 ATTTGTACCACGGATTGCT 57 3404713 3404731 TTCTGCGATCCATGTAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 2 2 2 92 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504797 3504901 ATATCAATGGGTAGCGATGAC 57 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 3 7 13 128 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593424 3593444 CGAATGGTACTTCATCTCCTC 58 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156 3 1 2 81 3L 3860696 3860716 TTCAGAATAACGCACAGAACC 59 3860754 3860906 TCATCCATAGAGGATTCATGAGTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 1 5 6 92 3L 4133819 4134470 TTCGACTAATCCAGAAGTGGA 58 4132191 4132209 TTCTCCTCACGGTCTTTGG 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 2 2 6 86 3L 4129782 4130399 GTATCGTAAGGAAGATAGCGT 57 4129716 4129734 GGTATTGTCGGCATAAGGT 57 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258 3 1 2 94 3L 4180797 4180815 TCAGCTATTGGTACTGCCC 59 4179578 4180742 CAGAAGTTTGTCTTCCTTGGTC 59 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 1 3 3 93 3L 5338821 5338839 TTATCCGGATTGGGTGCAG 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 2 2 3 84 3L 6093789 6093807 AAGCAGAGTGTGGAGAAGG 59 6093854 6094045 AGTAGATGTCGCTAAAGGCA 59 NA Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 1 1 1 62 3L 6156748 6156766 TATGGGCATTCCCTTCCTG 59 6156920 6156938 AGGTGACACATGTAGCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 2 1 1 63 3L 6156748 6156766 TATGGGCATTCCCTTCCTG 59 6156921 6156939 GAGGTGACACATGTAGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 1 3 3 80 3L 6187186 6187206 AGATCATAGCGATCCTCAAGG 59 6187245 6187333 TGAATTCCTCCAGTTTCATCTG 58 NA Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 2 4 4 80 3L 6685395 6685482 CGTAATAACCGGTCTTACAGC 59 6685335 6685356 CGGTATTCCGAGAAGTTTAGAC 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 2 2 2 86 3L 7117436 7117512 CGTTATGTCCACTGTCTGC 58 7117368 7117386 TACAGCAAGTGGTCATCCA 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 3 9 9 84 3L 7176527 7176546 AGGAATTGGTACGAGTGGTC 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076885 3 1 2 91 3L 7316340 7316359 CAAACACCTCTCAGCTTCAG 58 7316203 7316287 ATGGAGCAAACTTTCCTACG 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 2 3 4 92 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506689 7506707 GTCACTGGCACATAGACAC 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 1 3 15 121 3L 7689772 7689790 AACTACAGAGTCGACCCTC 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076673 1 1 9 198 3L 8351811 8353442 ACCTGATTCTCCAGTCGTC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 2 2 2 60 3L 8399640 8399661 ACTTAGTGGCTTATGTGAACAG 58 8399682 8399700 CGGAAATCCTCCAGAACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 1 2 2 101 3L 8418955 8419517 GGTAACAGCACATTGGTTCC 59 8419580 8419599 GATAGTGGTCTTTAGGGCCA 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 3 5 5 80 3L 8778944 8778962 GCGTTATATGTCCAAGCCG 59 8779005 8779080 TCCTCAAATTTGAGAACCGC 58 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 3 3 3 80 3L 8977958 8977978 GCTTCAACTCAGAAATCTCGA 58 8977753 8977917 TTTGGAAGCTCGATTCTGAG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 2 5 5 81 3L 9410806 9410824 ACTGCAGCAGATAACACAG 57 9408558 9410762 ATGAATTATCTCGGCCATGC 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607 2 1 3 143 3L 9730372 9731219 TACCTTCAGGGTCAAGTGG 58 9730247 9730266 CATGCTGATTAGCTCCTTGC 59 NA Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 1 2 2 88 3L 9835628 9835646 CTGTGATATACCGCTCCAG 57 9834654 9835577 TGTGCACAATCTTAAAGCAG 57 NA Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 3 2 2 88 3L 9835625 9835644 GTGATATACCGCTCCAGGAG 59 9834652 9835577 GTTGTGCACAATCTTAAAGCAG 59 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 3 2 2 126 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094424 11094444 GTAGCCAAGACTTAGTGAAGC 58 NA InUTR Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 2 1 1 95 3L 11822641 11822659 CCAAACAGCGTCTTTACGG 59 11822774 11822792 TCTTGTCGCACTCCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 2 6 6 85 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208828 12208846 TTTGTCCTTTGACCAGGAC 57 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076009 1 1 2 80 3L 12268224 12268242 GATCGGTCCAAGTACTTGC 58 12266707 12268180 GATGATGCGCTCATCTGAG 58 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 1 3 4 103 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13462076 13462095 CATGTATGGCGATGATGTGC 59 NA Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 3 2 2 104 3L 14555004 14555026 GCTGAGATCATATCAACACTCTC 58 14555088 14555160 TTTCGCTTCCTCAAATGTCTC 59 NA Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075679 1 1 2 170 3L 14658168 14660374 AAACTACATGCGATGCGTC 59 14660508 14660585 TTCAGTCGCACATTGAGGA 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 3 2 2 86 3L 14858470 14858826 ATCCTGACAGTTAAGGAGCT 58 14858875 14858893 GAACACATCACTCGACTCC 58 NA Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 2 1 1 67 3L 14887232 14887251 TTATAAAGCCAAGCCTTCGT 57 14887061 14887079 CTCTTCGCATCCATATCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 2 1 3 128 3L 15516169 15516187 TCATTTGCAAGACCTGAGG 57 15515672 15516078 TTAAATGGTCTGTCCAGAGC 57 NA Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 2 2 2 82 3L 15921311 15921397 GTCAAACCTCCAACTTCTATGC 59 15921250 15921271 CAGATCGCGATAAACAATTTGC 59 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 3 4 4 91 3L 15964326 15964404 TACCATTCTAGGTCGAGGC 58 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 3 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 3 2 4 87 3L 16785598 16785616 AGAATGCCGGATTACCCTG 59 16784779 16785548 TGAACAATCACACGTGATCG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 2 3 10 77 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175 1 1 10 72 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926166 16926406 CTTCTAGTTGGGCCAGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 3 3 3 80 3L 17035131 17035212 GAACAAGCTCTGCTAAAGCA 58 17035070 17035088 CGGATGTTGCATGTAGTGG 59 NA Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 3 2 2 117 3L 17233851 17233869 GATATGATGGGTGGAGGCC 59 17233698 17233770 CGGCAACATCCTTGAAACC 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 2 2 7 111 3L 17527653 17531772 TAACAGTGATAACGACTCTGG 57 17531914 17531932 GATTCTGACATACGGGTCG 57 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 2 3 7 80 3L 17535995 17536013 ATGTGGATCATCGTCAGCA 59 17536057 17536617 CGGTGTCTTCATTCGATGG 58 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0089387 2 1 2 119 3L 18480859 18480878 CCGAAGCACAAGTCTAAGGA 59 18480333 18480565 CAAAGCCACCTGTGAAATCC 59 NA Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 2 1 1 80 3L 18716321 18716342 TCGGCATTAAAGATTGTTCGAC 59 18716207 18716225 GTTGCTTGCGACTGTACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pip FBgn0003089 FBtr0075011 2 1 12 90 3L 19294005 19294079 CGATTGTCTACCCTTTAATTCCC 59 19293937 19293955 CTCTTCCCAAGTACCCACC 59 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 1 3 3 80 3L 20426898 20426919 GTGTTCATTAAATACCTGCCTG 57 20426959 20427050 AAGGACAGCAATAAGATCCC 57 NA Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 3 2 2 87 3L 20835436 20835507 AACATGTTAGAGCCGTGCT 59 20835557 20835576 TATGGCAACTACAGTGGAGC 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 2 2 3 130 3L 20998179 20998197 GAATAAACCGCCACAGGAC 58 20995287 20998085 TTCCCAGATGTTTGGTGCA 59 NA Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 2 1 1 70 3L 21209607 21209625 AATCCTTCCCAAGCTGGAC 59 21209402 21209422 GAATGTCTTCTGTGAGTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 2 2 2 82 3L 21439403 21439424 GGCCTAAGCGAAATAGATTTCC 59 21439467 21439552 ATCGTGGACACATTCTGCT 59 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 1 3 3 80 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612186 21612208 GGATGAATCCATCTTTGTACTCG 59 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 1 3 3 80 3L 22718630 22718710 GATTGCGTGTCAGTACCAC 59 22718752 22718772 AAGGTATACGCCCATCTAGTC 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143 2 1 2 89 3L 24124312 24124330 GACGTATGCTTGCTCTGTG 59 24154275 24203135 TACGATCCAGTTGTTCTCCT 58 NA Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 2 2 3 77 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24535534 24535552 TTGCTAACCGCAGTTACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 2 4 4 176 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206589 TATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 3 2 2 83 3R 240300 240318 GAGGTGGAACTGCTATCGT 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733 3 2 3 117 3R 1472926 1474227 GAGTCGGAGACTATGTTTACG 58 1472829 1472847 TAGAAGCACATGACCTTCG 57 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 2 2 2 82 3R 1493659 1493739 TTCGAAGGATATGTTCAGTTCG 58 1493598 1493617 TTTCGGACCAACTTATTGCC 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 1 3 3 80 3R 1535945 1536020 TCTTACTCCTGCATTGCGA 59 1536063 1536082 ATTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 2 5 5 86 3R 1684299 1684375 TCTTCTTCCAAGCCAAGGT 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 3 1 1 129 3R 1936680 1936698 GTTCCTGATCTGCAGTCAG 58 1936077 1936096 AGATGAATACCGTTCCAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 2 2 2 114 3R 2264478 2264564 ACAGACAGAAACCTCAGTG 57 2264640 2264660 CGATCACATGCAGATAATACG 57 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 2 2 4 82 3R 2479836 2480204 GGATGAAGATCTCCAATGCTC 58 2480248 2480266 TGTTCTCGTCTTCGGAGAC 59 NA Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 2 2 2 81 3R 2909300 2909422 CTGCATGCTAGGTATTCAGC 58 2909238 2909256 GATCCTGTACCACCATCGG 59 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302354 3 1 2 81 3R 3322497 3322517 GTTACAGTCCGGATTATTTGC 57 3322382 3322454 CACAGAAATCCCAGTGGTC 58 NA Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 1 2 2 80 3R 4761332 4761351 TATAGATAGTGAGGTGCGCG 59 4761391 4761660 CGATATTCACTCTTGATGCTCG 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133 2 1 2 93 3R 5081517 5081592 AAATTTAGCGACTCCAAGGA 57 5081645 5081666 CAATTGAGTCCATGTTGTAGAC 57 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117,FBtr0082118 3 3 3 82 3R 5367294 5367414 GGAACTTGAATAACCACTTTGG 57 5367233 5367252 GTTGTACGAAGAACCCTCAG 58 NA Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 1 2 2 163 3R 5566738 5566758 ATGACTCTGGTCTATCGACAG 58 5566939 5566957 CTTCTTGCCATCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582,FBtr0114583,FBtr0112577 3 5 5 93 3R 5756229 5756247 CAGTATTGAGGTGCCATCG 58 5769239 5769257 TGTTTCCAGATAGTTGCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 3 3 5 106 3R 5701849 5701867 CTTCACCTACAATGGACGC 58 5701936 5756095 CAATGGGTTCCTCATTTCCA 58 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082208 3 1 9 80 3R 5841636 5844227 GCCAATATTAGTTCCAAGGTGG 59 5841577 5841596 GACGGTTTGCTTACAGAAGC 59 NA Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 3 2 2 134 3R 5947592 5947610 AGGCTTTACCAATCGTGTG 58 5947761 5947784 GGATATAGGTAATACCCAGATCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 KP78b FBgn0026063 FBtr0301427 1 1 2 100 3R 7178776 7178796 GAGTGGATTAACGCTAATTCG 57 7176846 7176864 ATTCGGTTTCCTTCGTCAG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530 2 1 2 88 3R 7620447 7620528 GCAGAATCGAAATCTCATACTC 57 7620380 7620398 CATAGCTGATGTGAGCCAG 58 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 2 4 4 73 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646922 7646941 TATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42504 FBgn0260230 FBtr0300639 3 1 1 60 3R 7856530 7856548 TGCTCAGATGTTATGTCGG 57 7856425 7856443 AGAGAATCTGCAGATGCCT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 2 1 1 60 3R 8467266 8467284 GACTCTATGCCTCATCGGA 58 8466967 8466986 AGGTAGGCTAAGGAGTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 3 2 6 84 3R 8522007 8522790 TCCATAGTCATGCAGGTGG 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 1 5 5 81 3R 8845523 8845623 AAATACACGAGAAGGTCCTC 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 135 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 3 5 5 81 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796280 9796298 CTCACCCATTTCTTCCCGA 59 NA Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 1 2 2 97 3R 10156792 10166951 AAACGCAGGTAAAGATCTGG 58 10156714 10156732 ATTCGAGGATTTGTGCTCC 57 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 3 3 3 96 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551637 10551764 GGCTCCAGATGTTGATCGT 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 2 7 7 88 3R 10634008 10634095 CCTACGTTAAGGTGTATCTACTG 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083231 1 1 6 94 3R 11895057 11895592 AGCCCGAGAATAACAGTGAC 59 11894982 11895000 TTTGTGTCCGGTTTGTTGG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 1 4 6 80 3R 12458425 12458444 GGAGTAGTCCATCTGATCCA 58 12458487 12461282 GTTCTCAGCATTCTCCTGC 58 NA Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 3 2 2 80 3R 12852794 12852812 GATTCCCTGACCAGAGGAC 59 12852855 12852935 CAGGAAGTGCTTGATCTGTC 58 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615 2 1 3 194 3R 13956242 13956827 GAAGAATCAAGCAACGCGA 59 13956985 13957003 GAACATGGTCTTGTCCGGA 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 2 3 7 83 3R 13995813 13997262 GCAGTTTGGCTAACAAACTC 58 13997308 13997326 TGATGTTCAGGACCTTGCT 59 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 2 1 1 71 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192797 14192815 ATGGACGTTAAACACGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 1 1 1 282 3R 14323659 14323677 AACTGGAAACTGGCAACAG 58 14322802 14322820 CGGCACTCAATAGTGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 2 5 5 84 3R 14585654 14585785 CCTGAAAGATCCGGACTGG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 3 5 5 104 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751701 14751719 ACTGCGTAGATCCTCTACG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 2 4 4 96 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981434 14981452 GTCAAGCACCTTGTTCACG 59 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 2 3 3 60 3R 16379031 16379310 CTTAAGCGGGAATACTATGAAGTG 59 16378994 16379014 CCAGCGAGACTAGAGTATTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 1 4 4 126 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 2 2 2 80 3R 16457020 16457242 ACACTTTCTGAAAGACGAAGAC 59 16456961 16456980 CTTTCCAGGTACGATTCGTG 58 NA Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 1 2 2 80 3R 16479492 16479513 TGCCCAATATAGCAACTATACC 57 16479271 16479451 TCTGCGATATTCTCACCCT 57 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 1 3 3 80 3R 16562580 16562598 AAGTTCCCTAGATGGGAGG 57 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 3 2 8 81 3R 16576465 16580694 CGCTATGCTCATTCGATGG 59 16580737 16580757 CGTCCGATAGTCGATAATGGT 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 2 2 5 182 3R 17351005 17351023 ATCCATCGTTACGACCAGG 59 17351167 17351263 CGCGCCAAATAATAAGAAAGG 58 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 3 2 2 79 3R 17841000 17841018 CTCACGAATATCCAGCCGT 59 17841134 17841152 TACTTCTCGTGCTTAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 3 2 2 62 3R 17845755 17845839 CTAAACAGGGCCAGGTACC 59 17845711 17845729 ATTCATGTACTTGAGCGCC 58 NA DesignRelaxed Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 1 5 5 86 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894893 17894911 TAATCTTGCAGCCGGTCTC 59 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084335 2 1 3 111 3R 18515887 18515964 AATCTGGAAGATCGTGCCT 58 18515794 18515818 CACCTATGGAATTATCGAGTAACTC 59 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0084388 2 1 2 80 3R 19076366 19076386 CATCTCTAACAACCACAACCA 58 19076247 19076324 TGTGCTCATTGTTCTGACC 58 NA Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 2 2 2 93 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594240 19594258 TTGTACTTGGTGGGATCGT 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 1 4 4 116 3R 20048096 20048116 TCCTGAGAAAGTATCTAGCCG 58 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 3 4 6 120 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079743 20079761 CACAGGACGTGTTGATAGC 58 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622 1 1 3 81 3R 20209178 20209877 GATATTCCGACTGGATGAGCA 59 20209117 20209135 ATGGCTGTGCATGATTTGC 59 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084667 2 2 3 80 3R 20475259 20475375 CTGGAGCTCTATGAGGTGC 59 20475197 20475215 GAAGGTGGTCTCGATCTCG 59 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 1 3 3 109 3R 20647354 20647372 TCCACAAGAACAACACCAG 57 20647445 20647531 ATAACGCTTGTTACCGAGG 57 NA InUTR Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 3 2 2 80 3R 21159690 21159881 TCAAGGCAGTGGTACTCTC 58 21159628 21159648 ACGATTTACTACACTGATCGC 58 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 1 2 5 145 3R 21711423 21711441 TGCTGCTGATAGTCTACGG 59 21711548 21711618 CGCTGTGAAATACAGATTTGG 58 NA Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 3 3 3 84 3R 22293797 22293873 GCGATGATAGCGACTATGC 58 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 1 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809929 22810007 TTAAAGATTTGGCTCTCGCTC 58 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085249 1 1 3 133 3R 23755063 23755713 CATCCAATGAGCCCAAGAC 58 23755810 23755828 AACATATGGGAAGAGCACG 57 NA Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 3 3 3 81 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765496 ATCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289996 3 1 2 110 3R 24694701 24694830 ACCTTCTGCTCCACATCAG 59 24694903 24694922 GAATGGGTAGACGAACTGGA 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 1 2 2 81 3R 25002461 25003125 GCGATTGTTTAGCCAAGCT 59 25002398 25002416 CAGGGAGACGTTCATCAGG 59 NA Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 1 2 2 83 3R 25058455 25058473 GATATTTCTGTGCCGGTGC 59 25058517 25058593 GCAGGAATTCTGTATGTAGGTG 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110908 1 1 4 80 3R 25142269 25142287 TCGTGTACCTGCTCATTCC 59 25142069 25142228 CCTTATTCACGAATGAGTCCTC 58 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0301073 2 1 2 82 3R 25696798 25696816 TTCACGAACTACGTCAGTG 57 25696860 25696969 TGAGCTATTCTGAGAATCAGG 57 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 1 4 5 81 3R 25857057 25857154 CCATCTACAGATTCTTGCGC 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 2 2 2 84 3R 25991688 25991764 ACATTGAAGTGGTGAGTCTC 57 25991623 25991641 TAGGTATTCACGGCTTCGT 58 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 2 5 5 82 3R 26289004 26289024 ATCTGCTCTATGACATCTCCA 58 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 1 10 12 113 3R 26398693 26398711 TGGTGGAGAAGAACTCGTC 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 1 6 12 139 3R 26359221 26397540 ATCACTGAGACTTCTGCCA 58 26397642 26397661 AGTATGGTTATCTCCTCGGG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 2 2 13 82 3R 26421340 26421452 CCAAACGCAGATTAGGCAG 59 26421276 26421294 GATGACAATGTCCGAGGTG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 3 5 13 99 3R 26419560 26419842 ACGCCTAGAAACTCTACTCC 58 26419480 26419498 TGACCTTGACAATGTGCTC 58 NA Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 3 2 2 230 3R 26520394 26520480 GGATTTGCCAAGAAAGTGG 57 26520182 26520203 ATAACTGGGCATCTTATAGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 3 4 4 117 3R 26650594 26650683 GAGTTCCTATGACTGGTAACCT 59 26650761 26650779 CCTGAAAGCATCTTGCTGG 59 NA Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 2 2 2 82 3R 27166295 27177001 GAGATCAAGGATGATTTGCCC 59 27177045 27177063 CCGAAGTATGAGGTCTCGA 58 NA Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 1 3 3 80 3R 27502875 27502963 CGCTTTAATATTCCTTTGCCCA 59 27503003 27503022 TGGTACTTGCTTCTGATGCT 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 3 8 8 168 4 157779 157853 GTCGAGCAACCTTAAGACAC 59 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 1 2 3 83 4 660267 660287 GATTTGGCTTCTCAAACTGAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340 3 1 3 146 4 756804 756973 AAATAATCAGCACGCCGAC 59 757081 757101 CTTGTATCCTTTATCACGGGC 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089245 3 1 3 85 4 902562 903594 TTGATTAGGATGACATTCGGTG 58 902498 902517 GATGTTCCCTCAACTGTTGC 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 3 9 9 80 4 1068498 1068518 CCAGGATATCTGTCTCCTGAG 58 1068345 1068457 AAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100346,FBtr0089327 2 2 8 134 4 1130210 1131408 TAATCACTACTCCGCAGGC 59 1131503 1131923 TAGGACGAATTTATCAAGCCAC 58 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 1 4 4 80 4 1210570 1210593 GCAATCATGTACAATATACCCTCC 59 1210629 1210708 TTTCAACATCGCTATTCTCCTG 58 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 3 3 3 156 X 927432 935032 AATATGAGTATCCTCCGAGCAC 59 935149 935167 GTTTCGCACATTGTAGGGC 59 NA InUTR Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070176 2 1 3 100 X 935428 936304 GATTGACAGATACGATGTGCG 59 936366 936384 CCTCGGCACTCAAGTACTC 59 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0301968 3 1 3 138 X 1113610 1113763 ATCTGTACTCGAACCAGGC 59 1113490 1113512 TAGAACTCATCATACTCGTGCTC 59 NA Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 3 3 3 80 X 1187401 1187419 ATGCTCGGTATACAGCCTG 59 1187279 1187359 CTCAAAGAAGTCCAAATGCCT 58 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 1 2 3 80 X 1821881 1821899 AACCTTCGTCATCAACGAG 57 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 1 3 3 86 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862013 1870613 CTGGCATGTCACATTCACC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 78 X 1965424 1965442 CAAGGAGTACAAGACCACG 57 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378 1 1 3 80 X 1989358 1989376 GCTAAAGGAGAAGAACGGC 58 1989420 2002421 TGAAACCATCTTTCCGTGG 58 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 3 3 3 105 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038390 2038411 CAATGAACTGGTTGATCTTCTC 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 2 3 3 88 X 2679094 2679112 ACAAGATGACCTTGAAGCG 58 2678712 2679044 CAGGATTATCTGCAAATAGCG 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100 1 1 2 98 X 3799925 3800250 AACTGGCAGTCGTAGTCTG 59 3799845 3799863 TACGTGTAATCCGAGTGCA 58 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 1 3 3 81 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037712 4037731 TCGCACATTACCACATAGTC 57 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 3 3 4 80 X 5214531 5214604 CGCCAAATAATGGGCTATCC 59 5214470 5214491 ATTGTATTCGCTTTCCATCTGG 59 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465 3 1 3 82 X 5527490 5527780 CAAGTTTCTGGAAGCACCC 59 5527426 5527446 GATCACTATGGGTTGTCTTGC 59 NA Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827 2 1 2 119 X 5808803 5810304 ACTTTGAAGAATATGGCCGA 57 5808703 5808721 GATCATCTCGAGTCCTTCG 57 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 2 3 3 215 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616524 6616542 CAGAAAGATACGCCACGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 1 3 3 98 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616641 6616659 CATGAAGCTCAGCATGGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 1 3 3 119 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649216 AGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 3 7 21 82 X 6982619 6982638 TTTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0100208,FBtr0100217 1 3 21 87 X 6978688 6978707 GTTCCAGCAAATGTACCACC 59 6975076 6978638 CCATAGCTCCGTCTCTGTG 59 NA Nonspecific Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 1 2 3 166 X 7764352 7764370 GTTACGGAACAAGCTACGG 58 7764006 7764223 CTTCGGGTTTATTGTCCTGG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081 2 1 2 95 X 8302800 8303444 TTGTTAAGTATTCTCCACCGC 58 8302725 8302743 GAATCACCATGCGATAGCC 58 NA InUTR Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 2 2 2 109 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328885 8328904 TATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 1 4 6 80 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8444124 CATTCATGCCTGTATCGCC 59 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 3 4 4 81 X 8459190 8459423 GATACTGGGTCGAATCATTCAC 59 8459463 8459483 CACCAGATGTTCGAAGTTCTC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 3 4 6 89 X 8478535 8478553 ATACTCGGAGATCCAGTCG 58 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 CG42388 FBgn0259734 FBtr0300000 1 1 2 82 X 8944960 8945079 AAGGATGAGGGACAGAACG 59 8945125 8945143 ACAAAGATGAGCTCCTTGC 58 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 1 4 6 116 X 9005031 9005127 GAGCATGGATTTAATCCAGCC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 2 3 4 89 X 9673267 9674283 CGAATGAGAGTCGTGTTCC 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 2 2 4 83 X 9893264 9893283 ATCATTGATAGCCGATCGCA 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 3 4 4 80 X 10655531 10655622 GTATCCCGATGATATTATCTGTCC 58 10655474 10655492 CGCACCTTGGACATAATGG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 2 7 15 108 X 11275917 11275936 ATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 2 4 4 161 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444960 11445071 TTCAATCCATCTTCTATGCGC 58 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 3 2 3 82 X 11494345 11498350 GAGATATTTGACAAGCACGAC 57 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 2 6 6 151 X 11688899 11688918 AAGTGCATTGACGTGTACAC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 1 4 10 84 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 3 2 10 91 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848298 11856053 ACGTTGATTGAGTTCGAATCC 59 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 3 1 1 76 X 12447495 12447516 TCGTTAGGAGCGATTATAACAG 57 12447664 12447682 GCGGTGAATACCATTACCA 57 NA DesignNoJunction Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 2 2 6 89 X 12534793 12534811 ATCCTTACTCGCGAACACC 59 12534863 12537915 TGTCGTTCAGCTGATCTGAG 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 2 2 10 80 X 13490774 13494114 TGAAGAGTACACAGGAGAGG 58 13490713 13490731 TTCAGCTGATCATCGAGGT 58 NA Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 2 2 2 127 X 14127233 14127252 TACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 1 4 4 104 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 1 5 5 80 X 15749869 15749890 CTATAATCGCGTTGGAATGGAG 59 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 2 2 2 80 X 15782410 15782429 TTTAAGTGCCGTGGAAATGG 59 15782274 15782293 AATAGCTTACCAACCAGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 1 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 3 3 3 83 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965135 15965154 GTGCTTGCGATAGTTGATGG 59 NA Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 1 2 2 109 X 16110288 16110306 ACTCGCTGCTAAATTAGCA 57 16107291 16107310 CGGATTCATTATGTGCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eas FBgn0000536 FBtr0074213 2 1 5 80 X 16174013 16175021 CTAAGAAGAATGTTCGTCAGACG 59 16175058 16175079 AATTCAATTGGTTCTGGACCTG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 3 9 9 80 X 16273082 16273102 CCATTTGGTTATGCATGAGCA 59 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121,FBtr0111023 1 2 4 80 X 16380930 16383033 CAAGAACTACACAGATCACAAGG 59 16380872 16380890 AAGCTGTGCATAAAGTCGG 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074368 2 1 7 121 X 16588401 16588666 CACTAGATAAGCATGTGTACTGTC 59 16588303 16588321 CTTGTGTTGCAAGTTGCAG 58 NA InUTR Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323,FBtr0074322 1 2 2 82 X 16605541 16605562 GAGCTATCAAGATATGTTCGGA 57 16605605 16605697 GTCCAGAGAACCGAAACTC 57 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 3 2 2 107 X 16741016 16741036 GACAGCTTCTTAGAAGCAACC 59 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 2 3 3 60 X 17031947 17032021 AAACTGTGCCCAATCTTCG 58 17031905 17031923 AGAGACTATTGCTGGCCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388 1 1 2 155 X 17087055 17087936 CAACACCAGATTAGTCGCC 58 17088055 17088073 GTAACTGCTCATGGGACGA 59 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074441 1 1 3 123 X 17183062 17195405 GAAATTCATAGAGTTGGATGCC 57 17182960 17182979 GTACTCGTCAATCATTTCGC 57 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 1 2 2 175 X 17983254 17983335 AATACAAGCTCAATCCGCT 57 17983097 17983115 AGGAGACCTGAATGTTGGA 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 3 1 7 83 X 18000953 18006604 GGATGTTGAGATCAACGATCTC 59 18000826 18000844 TTGGAGACCTTCTTCAGGG 58 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 3 2 2 80 X 19413855 19413945 GAACATTATGCGCATGTCC 57 19413793 19413811 TCGAACTGGATTTCTGGGA 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302864 3 1 6 83 X 19418178 19422673 GTCTGATAACGATGACAAGATACAG 59 19422712 19422732 TCATCCACATTGATGGTTTCG 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074734 3 1 2 164 X 19503513 19504422 CAACTACCAGCTCAACGAC 58 19504615 19504633 TCACAACAATTTCCTCGGG 58 NA Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 2 2 2 80 X 19533357 19533376 GAGTCCGCATATGAATCCTC 58 19533419 19533489 CACTGGTACACCTTCTCCT 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089399 3 1 13 81 X 20105882 20105900 GTCTACACAAAGCAGACCC 58 20101659 20104509 CTTCGTCGTCATAATAATCCGT 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407,FBtr0089401,FBtr0089404 3 4 13 133 X 20101657 20103200 GAATTCACAGACGACGAAGAG 59 20101544 20101562 ATCTCGAGTGGTGTGATGG 59 NA Nonspecific Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 3 2 2 60 X 20293018 20293101 CCAATTACTGCTATCGCTGC 59 20292977 20292996 TGCAGGTACTCATTCAGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 3 1 1 122 X 21064934 21064953 AGTGCGTAACATCATCTGGT 59 21065151 21065169 TAATAGGCTCTGCTCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299525 3 1 5 101 X 21900445 21904038 CAAAGAACCGGCAACAGAG 59 21904101 21904121 GTAACTGTTGGTGTAAGCAGC 59 NA Drosophila melanogaster 61 tRNA:Y1:28C FBgn0012018 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-287 FBgn0067705 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:49Fd FBgn0011884 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30452 FBgn0050452 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-278 FBgn0086369 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32303 FBgn0052303 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:84Dd FBgn0012001 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-C1096 FBgn0086055 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:I FBgn0013696 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Pp1-Y2 FBgn0046698 FBtr0113894 3 1 1 114 YHet 280284 280303 AATCTATCGAGACCATGTGC 57 291295 291313 CAGTCGACAAATGTACGCC 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-1135b FBgn0083011 FBtr0113574 2 1 1 60 X 17040508 17040529 ACTCTCAAAGGGACTAATAGTG 57 17040469 17040490 GCTTTCTATTCTAGCACTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1060 FBgn0083013 FBtr0113560 1 1 1 60 X 6636940 6636960 AATTTGGACGAGTTCATCAGC 59 6636900 6636918 TTTAGAAGAGGGCGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12446 FBgn0031201 FBtr0077343 1 1 1 60 X 22212372 22212391 CGTTGAGCTACTGGTTTGTG 59 22212331 22212352 GCAAATTATGTTAAGGAGGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0077353 1 1 5 80 X 21887460 21888900 TTGCTTCAACAGAACAGCT 57 21888944 21888962 TAGAAAGCTCCGCAATGTC 58 NA InUTR Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 1 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG1722 FBgn0031168 FBtr0077237 2 1 1 60 X 21121743 21121761 AGGACCAGACTCATAGACG 57 21121701 21121719 GGAACAGTACCGAAGTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 2 1 1 96 X 21064961 21065098 CATCTTCTTGCTAATTAGGATCGTC 59 21065151 21065170 ATAATAGGCTCTGCTCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)19Ec FBgn0001560 FBtr0299922 3 1 1 60 X 20753098 20753119 TAGTAATCGGAATAATCGACCG 57 20753059 20753078 GGCCAGATCATCCTTATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295,FBtr0300487 1 3 3 109 X 20542568 20542709 CCCTTAAAGTAGAAGTCGTGGT 59 20542480 20542498 ACTGGACATGTCGGTATGG 59 NA Drosophila melanogaster 61 CG17068 FBgn0031098 FBtr0077341 1 1 1 60 X 20120080 20120099 CTGGTATCCCATGTACTCCT 58 20120039 20120057 GAACATGAACTTCACGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42583 FBgn0260873 FBtr0301570 2 1 1 67 X 20034125 20034143 CCTCATGGCTGTAATCCGA 59 20034174 20034192 CATCTACCCATCTACCGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14223 FBgn0031053 FBtr0074758 1 1 1 113 X 19554622 19554705 TCTGCCTTATTTCCCTGCT 58 19554527 19554545 CAATAAAGTCCTCGCCACC 58 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 3 2 2 80 X 19506166 19506185 CAGTGATATCTGTGTCCCGA 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074713 2 1 8 159 X 19389565 19389583 CAACTTCTAATTCGCTGCG 57 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 rictor FBgn0031006 FBtr0074689 2 1 1 80 X 19151125 19151144 AGAGGCTGCCTACATATGTC 59 19151001 19151082 AGCGCATACATTCAAGCTC 58 NA Drosophila melanogaster 61 Mur18B FBgn0030999 FBtr0074672 3 1 1 130 X 19107402 19107421 CAAAGCTATCCACAGTCCTG 58 19107584 19107602 ATCATCGCTCCATAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Ulp1 FBgn0027603 FBtr0074693 2 1 1 97 X 19097929 19097948 CTAAGGAATGACTTTGCGGA 58 19097792 19097869 TCATTAGCCTGCTGTTCAG 57 NA Drosophila melanogaster 61 Obp18a FBgn0030985 FBtr0074701 3 1 1 149 X 19029760 19029835 GATAACTATGTGGCAATCAGCT 58 19029632 19029650 ATCAGACACCGGCTATAGC 59 NA Drosophila melanogaster 61 CG14191 FBgn0030981 FBtr0074665 1 1 1 148 X 18975765 18975898 AAACACGCCAACATGAAGG 59 18976010 18976028 TATCCGCCGCTATATCCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7358 FBgn0030974 FBtr0074652 3 1 1 123 X 18786885 18786903 CGAGACCATCATCGATTGG 58 18786707 18786799 CAGAACCTAAACCTGGACTC 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 2 7 9 138 X 18267246 18267337 AATCCCTCCAACCTTTCCG 59 18267438 18267457 GATCTTATTGTACGACGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 2 3 3 86 X 18095257 18095335 AGATGGTAGGACAACAGCC 59 18095384 18095403 GGTTCTTGTCCATCTGATCG 58 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836,FBtr0302835,FBtr0302837,FBtr0302834,FBtr0302833 3 5 5 94 X 17640916 17641005 GTCATGTCCACCATAGATCTC 57 17641061 17641079 CGTACCTGGAAACAGTGAC 58 NA Drosophila melanogaster 61 CG5703 FBgn0030853 FBtr0074452 2 1 1 80 X 17527123 17527299 GATCAACGATGACTACTATGAGG 58 17527337 17527357 GATATCTTATCCGCCTTCAGG 57 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443,FBtr0074441,FBtr0074442 2 3 3 85 X 17182015 17182033 CAACCATCCAGGATTGGAC 58 17181556 17181966 AATTGCGGTAGGTCTTCTC 57 NA Drosophila melanogaster 61 CG8915 FBgn0030833 FBtr0074447 3 1 1 92 X 17138022 17138040 CAGCTATCAGTGTCTCGGA 58 17137887 17137967 TGCATTGTCTATTCATGCGA 58 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 3 2 2 107 X 16741016 16741036 GACAGCTTCTTAGAAGCAACC 59 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 3 5 5 90 X 16718725 16718743 GAAGGGATACCATGTGTCG 57 16718794 16718964 CAAATAGATTTGGTACTGCTCG 57 NA Drosophila melanogaster 61 CG34325 FBgn0085354 FBtr0112527 1 1 1 60 X 16608994 16609102 GCTTCAAGTGCAAGAAATGC 59 16608953 16608972 TTATCCTCCACGACAAAGGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13010 FBgn0030770 FBtr0074373 3 1 1 136 X 16572621 16572639 GATAATGCGGAGCAACCTC 58 16572503 16572522 TTGCTCATGCCAAAGTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32579 FBgn0052579 FBtr0074225 1 1 1 80 X 16217892 16217913 GTCTATGTCCTAAACTATGCGT 57 16217952 16218121 TTGGTAATATTCGATCTCCGC 58 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 3 4 4 84 X 16193750 16193839 AGCTATTTGATCAAACTGGCG 59 16193885 16193903 TCTCGATGCGTTCTCTGAG 59 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301233,FBtr0301232 1 2 2 80 X 15818123 15818143 TCGCTACAGAATTCACTAGCT 59 15818181 15818261 GTACGATGGATCGTTATATGTGG 59 NA Drosophila melanogaster 61 mRpS30 FBgn0030692 FBtr0074094 1 1 1 83 X 15680651 15680834 CGACTACTACAAGCATCTGG 57 15680880 15680898 ATGATCTGCGTTAGGATGC 57 NA Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 2 1 1 159 X 15627878 15627897 TACCAGTTCCCGAAGAACAC 59 15627581 15627756 ATCGTCCACTGGCTTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8128 FBgn0030668 FBtr0074053 1 1 1 80 X 15592707 15592797 AGAGCATACTCGTCCTCCA 59 15592841 15592859 TGTTACTCCGGCAAATCGA 59 NA Drosophila melanogaster 61 CG11655 FBgn0030638 FBtr0074031 3 1 1 290 X 15348631 15349010 TTGTTCTCCTGGCAGATCG 59 15349264 15349282 ACTAATTCGCTTGTTGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9065 FBgn0030610 FBtr0073966 2 1 1 229 X 14978543 14978562 CAACAGTGCATCTCAAGGAG 59 14978246 14978264 TCTTGTGCGCCTCTATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 1 2 2 103 X 14944078 14944097 TGAGCTAATGAAGCCTTTCG 58 14944161 14944242 TCTTAAAGGCTTGACTCTCGA 58 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 1 4 4 104 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 CG9411 FBgn0030569 FBtr0073916 2 1 1 84 X 14368724 14368742 AATGTGATCACCGGACCAG 59 14368583 14368603 TGGAATACGAATCATCCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Muc12Ea FBgn0052602 FBtr0073911 3 1 1 82 X 14175316 14175334 AGCCTACAACTCTGAAGCC 59 14175379 14175618 CGTAGTTCCACTAGTTCCCT 58 NA Drosophila melanogaster 61 na FBgn0002917 FBtr0112815 2 1 1 80 X 14168771 14168790 GCCTGATATACTTCTGCACC 58 14168830 14169183 AGTTCTCCATGATAATAGCCAC 57 NA Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 2 1 1 184 X 14139326 14139663 TTTCTGGTGCTCTTCCTGG 59 14139876 14139894 TTCTTTAGCGTCACCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 1 2 2 80 X 13114117 13114137 TCAAGGAGGATCAATGGATGG 59 13113905 13114075 AGACGATTACCTTTCCGCC 59 NA Drosophila melanogaster 61 Cyp318a1 FBgn0030369 FBtr0073623 1 1 1 80 X 11927468 11927487 GACAGGCGGTTAAGTTTACG 59 11927529 11927949 TGCCCATAATGGTCAAACAG 58 NA Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 2 2 2 82 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924720 11924738 TGCTCAAATGGAATGCCTG 58 NA Drosophila melanogaster 61 CG15738 FBgn0030352 FBtr0073572 2 1 1 84 X 11787319 11787337 TGCGCAAGATCTTCCTCTC 59 11787385 11787637 CTCTTGTGGGTTAGCAGGA 59 NA Drosophila melanogaster 61 CG11802 FBgn0030346 FBtr0073600 2 1 1 60 X 11766055 11766076 TAATATAGTGATTGTGCGTCCC 58 11766016 11766034 CAAGTCCATGTCCACATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr10b FBgn0030297 FBtr0073550 1 1 1 80 X 11307034 11307054 ACCTCTACTATAGATACGCCA 57 11306914 11306993 ATGTGGACACCTGATTTACG 58 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073454,FBtr0073455 3 2 2 60 X 11250543 11250564 TACTTCTTCAAGTCAATGGACG 58 11250585 11250603 AGTCGTCGGCTATTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073430 1 1 3 158 X 10986741 10986821 CTCGTATTTCGCTTCGTCC 58 10986941 10986961 GAGTGCAAGTTAGGAAATCGA 58 NA InUTR Drosophila melanogaster 61 Hmr FBgn0001206 FBtr0071511 3 1 1 112 X 10486683 10486759 AGTTTCACATGCCAGAGGA 59 10486589 10486609 GTACTTAAACGGACGCATCAG 59 NA Drosophila melanogaster 61 CG17841 FBgn0028480 FBtr0071444 2 1 1 102 X 10276535 10276625 GCTCTCAAGGTCTTTCTACC 57 10276690 10276708 CATTTATAAGGGCGGTGGG 58 NA Drosophila melanogaster 61 CG15251 FBgn0030166 FBtr0071427 1 1 1 127 X 9864484 9864502 CTATCGGCACTGCTATCGT 59 9862131 9864393 CTTAACACCTCCTCTGCGT 59 NA Drosophila melanogaster 61 Gr8a FBgn0030108 FBtr0071311 2 1 1 120 X 9122067 9122085 TCAACTTCTCCATTCTCGC 57 9122166 9122248 GGAACGATTAGGTAGTAATCGT 57 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 1 2 2 95 X 9091370 9091388 AAGGATGTGATCGGAGCAG 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0112965,FBtr0071294,FBtr0071298,FBtr0071295,FBtr0071297 3 6 6 83 X 9007919 9008012 ATCATGGACATACGCTCGG 59 9008059 9008077 GTTCTTGTCCGAGTTGAGC 58 NA Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071266 1 1 2 80 X 8799586 8799604 TCAACTTCGAGAGTCTCGG 58 8799404 8799542 TGCGACATGGTGATATCCT 58 NA InUTR Drosophila melanogaster 61 Cp7Fb FBgn0014465 FBtr0071201 1 1 1 88 X 8368221 8368381 AGTCAACAAAGCGGATTGC 59 8368433 8368451 GTGAAGCTACGTACCTGGG 59 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0071242 2 1 2 85 X 8353359 8354806 CAGTTGTGATGGATGCATCC 59 8353293 8353311 AACAGTTGCGATTGAGCAG 59 NA Drosophila melanogaster 61 hdm FBgn0029977 FBtr0071133 3 1 1 97 X 7813102 7813122 TACATCAGTTTACTGCAGTGC 58 7812922 7813043 TTGTTGACAGGCAATGCAC 59 NA Drosophila melanogaster 61 bys FBgn0010292 FBtr0071090 3 1 1 195 X 7796323 7796408 AACTTCAGTTTGAATGATGGCC 59 7796564 7796582 GTATGTCGGCCTCCTTCTC 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100214,FBtr0300838,FBtr0300843,FBtr0100208,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100217,FBtr0100207,FBtr0300839,FBtr0300840,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 21 21 81 X 6979497 6979515 CACATCGGAAATGGACTCG 58 6979364 6979453 ATAGGAAACCTTAAGCCGCT 59 NA Nonspecific Drosophila melanogaster 61 bou FBgn0261284 FBtr0071004 1 1 1 60 X 6880911 6880930 TGACTATGTGCGAAACAAGG 58 6880952 6880971 ATCACAAGTGTAAATGCAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12796 FBgn0029909 FBtr0070973 3 1 1 80 X 6726267 6726287 GTCCATGTTGACTCTGATCTC 58 6726137 6726231 GTCATGTATCTTCTATAGTGCAGAG 58 NA Drosophila melanogaster 61 Atx-1 FBgn0029907 FBtr0299814 2 1 1 68 X 6716155 6716236 TGCCAAGAAACAAAGTCCG 59 6716268 6716286 AAGACGAAGGAGGAACAGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 3 2 2 183 X 6484265 6484349 ATATCATCTTGCAGCAGGTG 58 6484495 6484513 CAGTGGCTGAGAATGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Spat FBgn0014031 FBtr0070913 2 1 1 80 X 6424398 6424417 GTGAACACGATTAAGGTGCC 59 6424459 6424546 AATCTCAACGCTGTACTTGC 59 NA Drosophila melanogaster 61 CG3918 FBgn0029873 FBtr0070912 1 1 1 107 X 6418746 6418764 CAACAAGGATACGTTGCGG 59 6418906 6418924 AGCAGGATCTCCTTGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33669 FBgn0053669 FBtr0302419 2 1 1 73 X 6294003 6294082 GATTCTTGACTACTCCGAAGC 58 6293950 6293968 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3823 FBgn0029863 FBtr0070900 2 1 1 93 X 6200316 6200425 AAGGAGCAGAGGGATTATCTG 59 6200479 6200498 TGACTCCGGAATCACTTGAC 59 NA Drosophila melanogaster 61 CG12219 FBgn0043796 FBtr0070925 1 1 1 95 X 6194996 6195080 CTTGTACCTCTGCCTCTCC 59 6194919 6194937 AGCTTCCAGAAGTTGTGGA 58 NA Drosophila melanogaster 61 Top3beta FBgn0026015 FBtr0070930 2 1 1 94 X 6179392 6179477 GAAGTACATACAGACCAAACCG 59 6179319 6179337 ACTCGCGATACACCTTCAC 59 NA Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870,FBtr0089869 1 2 2 60 X 6170573 6170592 CTACGATGTGACCAAGTTCC 58 6170459 6170477 CTCATCCACCAGGGATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Spt6 FBgn0028982 FBtr0070896 1 1 1 80 X 6163484 6163568 CATCTTTACAGACGCATCAC 57 6163610 6163629 TCGTACTTTGAGAAGTCGTC 57 NA Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 3 2 2 118 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962706 5963100 TCTTTGGGCTTCTGAATAAAGG 58 NA Drosophila melanogaster 61 fs(1)M3 FBgn0005390 FBtr0070892 3 1 1 80 X 5856875 5856893 ATCTGATCCGAACTGTGCA 59 5856762 5856834 CACTTAGATCTTCATCTGGAGC 58 NA Drosophila melanogaster 61 fs(1)M3 FBgn0005390 FBtr0070892 2 1 1 80 X 5856870 5856888 ATCCGAACTGTGCAATTGG 58 5856757 5856831 GACAACACTTAGATCTTCATCTGG 59 NA Drosophila melanogaster 61 CG3016 FBgn0029819 FBtr0070828 3 1 1 111 X 5771719 5771738 AGAATCTTTACCGGCTTCTG 57 5771569 5771645 GTGTAGTACCACCGATGTG 57 NA Drosophila melanogaster 61 CG42264 FBgn0259149 FBtr0299596 3 1 1 154 X 5668165 5668183 CGGGTTCAACGATGAACTG 59 5667965 5668047 ATTGGAGACCCTGATGACC 58 NA Drosophila melanogaster 61 CG34434 FBgn0250904 FBtr0112735 1 1 1 163 X 5510100 5510118 AAGAACGGAATGCTGAAGC 58 5509829 5509973 TCGACGTTTGTGTTCTTGG 58 NA Drosophila melanogaster 61 CG32772 FBgn0052772 FBtr0300997 1 1 1 103 X 4805119 4805137 CATCAGAACTCGCAACAGC 59 4805204 4806786 ATCAGATCCACGTCTTCGG 59 NA Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 3 1 1 61 X 4543646 4543664 TACATATTGCCGGTTTGCC 58 4543545 4543622 ATTCATCTATTCTCGCCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG12184 FBgn0025387 FBtr0070696 3 1 1 178 X 4523921 4523942 GGATATAGGAATCGAGTTGGTC 58 4523711 4523782 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG2982 FBgn0029704 FBtr0070648 3 1 1 148 X 4213497 4213516 GTTGTAACAGTAGGCACGTG 59 4213689 4213707 CTGTTGCCTTGAGACTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16781 FBgn0029661 FBtr0070530 3 1 1 82 X 3357850 3357930 GCCGCGTTATCATATGGAG 58 3357786 3357804 CTCCATCAGCATTCGACAG 58 NA Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 3 2 2 99 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024845 3024864 GGAAATCCATTGACCACAGC 59 NA Drosophila melanogaster 61 CG14420 FBgn0029643 FBtr0070553 3 1 1 160 X 2833530 2833548 TCAACTGAGTCTGGCTGTG 59 2833774 2833792 TGCCCTTCAGAGATGTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3526 FBgn0040355 FBtr0113325 1 1 2 185 X 2784837 2784855 CTATCCACCTGTCCACCTG 59 2787341 2787359 AGCGATAGAAGGTCATCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2685 FBgn0024998 FBtr0070499 2 1 1 82 X 2607294 2607376 GCGACTCTATCACAATGACG 58 2607231 2607249 TCTTCAGGCGCTTCTTCTC 59 NA Drosophila melanogaster 61 CG2680 FBgn0024995 FBtr0273279 3 1 1 149 X 2600884 2600998 GTTTGAATCGCTGCAAGTC 58 2600753 2600771 TCCTGAAGGTGCCTAATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2865 FBgn0023526 FBtr0070408 1 1 1 176 X 2176545 2186370 AGAATCTGCCCAGAACCAG 59 2176387 2176405 ATGATCCGTTTGAGGAGCC 59 NA Drosophila melanogaster 61 CG3191 FBgn0023525 FBtr0070417 3 1 1 82 X 2145384 2145719 TGCCCAAGGAGATTGATCC 59 2145320 2145338 GATGAGCTTCCGAGTCTCC 59 NA Drosophila melanogaster 61 CG32801 FBgn0052801 FBtr0070355 1 1 1 62 X 1796688 1796706 AGATCTAACCGGCACATCC 59 1796485 1796662 TAGCGGATGAACTTGGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 1 2 2 80 X 1754142 1754160 CCTTAACACCGATGTGGGT 59 1754006 1754098 CAGCAGTTAATGGTCAGCG 59 NA Drosophila melanogaster 61 CG14625 FBgn0040358 FBtr0070202 3 1 1 107 X 1093697 1094668 TGATCATCATGTCGACGCT 59 1094739 1094757 TCACCTCCAAAGAGGACAC 59 NA Drosophila melanogaster 61 CG11380 FBgn0040359 FBtr0070201 3 1 1 112 X 1085739 1088244 TAATATTGGGCACTCTTAGTGC 58 1088317 1088335 CTTCTTCAGGGTGGTAACC 57 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 2 2 4 181 X 516159 516242 ACCAGGTGGAGATTATATCAAGAG 59 516381 516487 AGCTGCAATCCTGATATGCT 59 NA Drosophila melanogaster 61 G9a FBgn0040372 FBtr0070063 2 1 1 80 X 146767 146786 ATCAGGACTACAGATTCCCT 57 146826 147112 CGTAGTCAAAGCATATTTCCTC 57 NA Drosophila melanogaster 61 Su(Ste):CR42436 FBgn0259867 FBtr0300164 3 1 1 150 U 8893541 8893561 CTAAACAAAGCGCTTGAACTG 58 8893673 8893691 CTTGACTTCGAAATGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42431 FBgn0259862 FBtr0300159 2 1 1 150 U 8491305 8491323 TCTGTGAACGAGTGAACTG 57 8491437 8491455 ACTCGTTGACCTTGATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42425 FBgn0259856 FBtr0300153 2 1 1 61 U 7785460 7785479 GAAAGCAGGAATGTTTGTCC 57 7785503 7785521 CAACGCACTACGGAATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 2 3 3 93 4 1150105 1150202 TACAACATTCGACTTGGAGAC 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 2 2 2 86 4 984848 984866 CTTCCCACCAGATAGTGGG 59 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 lgs FBgn0039907 FBtr0089111 2 1 1 80 4 463538 463560 CCTTACTCAGATGGTAGATTGTG 58 463006 463501 GAACTTATTTCAGCTTCCTCGT 58 NA Drosophila melanogaster 61 CG2219 FBgn0039889 FBtr0089153 3 1 1 92 4 199495 199571 TTATACACGTTGCACTGATGG 58 199423 199441 GCGGTACGCATTAATTCCA 58 NA Drosophila melanogaster 61 tRNA:K5:84ABd FBgn0026162 FBtr0081622 1 1 1 60 3R 2645623 2645641 TAGCTCAGTCGGTAGAGCA 59 2645665 2645683 GAACAGGGACTTGAACCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 salt FBgn0039872 FBtr0300915 3 1 1 100 3R 27579419 27579579 GCTACGAGTATCTTGAGTTGC 59 27579339 27579357 AAACATGTACACGGGAAGC 58 NA Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 3 2 2 63 3R 27421798 27421817 GTCAACTCCTACCTGAAGGG 59 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 zwilch FBgn0061476 FBtr0085777 2 1 1 80 3R 27037398 27037418 TTGTTTCAGATTCACTGCACC 59 27037277 27037359 GACATCGTTGTAAACATTTGCC 59 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085743 2 1 3 122 3R 26886878 26886898 CACTGCGAATATCAAGATGGC 59 26886171 26886799 CCTTCTTCTAATTCGACACTTACG 59 NA InUTR Drosophila melanogaster 61 CG31008 FBgn0051008 FBtr0085748 3 1 1 65 3R 26815466 26815485 ATCGGATCAGGAATAACGGG 59 26815420 26815438 GACTAAATCGCTGTGGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CecC FBgn0000279 FBtr0085616 1 1 1 60 3R 26042383 26042470 CTTGGCAAGAGAATCGAGC 59 26042494 26042512 CCAGTCCTTGAATGGTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sry-alpha FBgn0003510 FBtr0085557 2 1 1 60 3R 25868295 25868315 CGCCTTAAGATACTGTACTCC 57 25868333 25868355 GATTATCCCTGCATATCAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15525 FBgn0039732 FBtr0085607 3 1 1 130 3R 25823186 25823204 AAACAAAGGAGGAGACGCT 59 25823012 25823030 CTGATTCTATGTTGCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 Obp99c FBgn0039682 FBtr0085463 3 1 1 73 3R 25512417 25512435 ATCTGATCGTAGCTCTGGC 59 25511893 25511912 GATCTCCTCACCAGTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 yemalpha FBgn0005596 FBtr0085415 2 1 1 120 3R 24947497 24947515 GTATGGCAACTCCTATGCC 58 24947327 24947413 GATTTCGTCGTAGGCTTCC 58 NA Drosophila melanogaster 61 CG11841 FBgn0039628 FBtr0085361 2 1 1 61 3R 24876864 24876882 AAATCCGGATCCATTTGCC 58 24876960 24876979 GCTCTTCGAAGACAATCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516,FBtr0085359 3 2 2 93 3R 24867136 24867328 AGAGTCACTTCGATCGAGC 59 24867384 24867403 ATGTTGCTCACATTGGTCAC 59 NA Drosophila melanogaster 61 CG14527 FBgn0039613 FBtr0085330 2 1 1 60 3R 24707226 24707248 CTTAGGTGTTAAGGACGAATTGG 59 24707265 24707286 CACCTCGAATTCAAACATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4815 FBgn0039568 FBtr0085260 3 1 1 60 3R 23815874 23815893 CAAGTATCCCTTGAGGAGCA 59 23815833 23815851 ATGCAGTACCGATCGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr97Eb FBgn0039481 FBtr0085135 1 1 1 99 3R 22916316 22916709 TGAAATTGACCTTGAGCTTGG 59 22916237 22916255 ATCTGCTTGAGAATGGGCA 59 NA Drosophila melanogaster 61 Cpr97Ea FBgn0039480 FBtr0085136 3 1 1 80 3R 22909614 22909696 AAACCCTATCGTGTTCAACG 58 22909553 22909572 GTATTGCACATACTGTGGCT 58 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0085082 3 1 3 103 3R 22788170 22788894 TTCAGCTTCACTGAGGTCC 59 22788085 22788105 AAATAATCGTGCGGAAAGACG 59 NA Drosophila melanogaster 61 CG14550 FBgn0039405 FBtr0084974 2 1 1 60 3R 21883331 21883351 CTTTGCCTTCCTCATCTATCC 58 21883291 21883312 AATGGAATCAACATCCACTGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 m6 FBgn0002632 FBtr0084959 3 1 1 107 3R 21858776 21858794 GTCAGCGATACGATAGCCT 59 21858865 21858883 TCTCCAAGCAGATGACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 2 3 3 96 3R 21717670 21717688 AATGGTCAGGGTTCATCGA 58 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 alpha4GT2 FBgn0039378 FBtr0300129 3 1 1 144 3R 21658332 21658350 GCTCTGTGGTCCAATTGAC 58 21658457 21667605 TTATGCAAAGCCCTGATCAG 58 NA Drosophila melanogaster 61 Dhap-at FBgn0040212 FBtr0084897 1 1 1 80 3R 21314290 21314312 TTCATCCTGATGTCCTACATCTG 59 21313980 21314251 CATGGAGTGGAAATCCATGC 59 NA Drosophila melanogaster 61 CG13659 FBgn0039319 FBtr0084828 3 1 1 84 3R 21127692 21127712 AAGAAGATTGGCTACCAAGGA 59 21127753 21127836 GTAGAAACTCGTAATATCTGTGGC 59 NA Drosophila melanogaster 61 CG34027 FBgn0054027 FBtr0100082 3 1 1 84 3R 20929713 20929733 GTGCAAACTATAAGCTCATCG 57 20929598 20929668 TTACTTCGTTCTCCTCTGTG 57 NA Drosophila melanogaster 61 CG11839 FBgn0039271 FBtr0084766 2 1 1 81 3R 20895737 20895904 AAAGCCAGCATTGGTTTCC 59 20895946 20895967 AATCCTGCAAATAATGCAGGTC 59 NA Drosophila melanogaster 61 CG10845 FBgn0039246 FBtr0084713 1 1 1 60 3R 20727779 20727797 CGCTGTCTAAGGAACAAGG 58 20727820 20727839 GAAATCGCTCTAGCTCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18410 FBgn0039226 FBtr0084741 2 1 1 102 3R 20625161 20625179 TTAGAGACGTTGAAGCTGC 57 20625021 20625095 CCTTGGTCATTGTCAGGAC 58 NA Drosophila melanogaster 61 CG13625 FBgn0039210 FBtr0084671 2 1 1 60 3R 20410358 20410377 TTCACCCGTCAGAATTAAGC 58 20410317 20410335 TCTCGCTGGGCTTAAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13613 FBgn0039193 FBtr0113278 3 1 1 113 3R 20191768 20191922 TTCCTGCTCACACCATCTC 59 20191997 20192017 TGATAGATGACACTGACCACC 59 NA Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 1 2 2 143 3R 19864976 19865327 AGAACGAAGGTCACAAAGAG 57 19865433 19865451 TTGTCTGCATCTTGTCGTG 58 NA Drosophila melanogaster 61 CG5857 FBgn0039125 FBtr0084491 1 1 1 142 3R 19750651 19750730 ACACAGACTATCAACACCTG 57 19750834 19750853 TTCAATGGAGATCTCCTTGC 57 NA Drosophila melanogaster 61 CG10251 FBgn0043005 FBtr0113347 1 1 1 84 3R 19524336 19524417 GCTAACCGTAATTGTGCCC 59 19524270 19524288 CTCCAGACTCAGCACTACC 59 NA Drosophila melanogaster 61 Ir94e FBgn0259194 FBtr0299678 3 1 1 80 3R 19231644 19231662 GTTTAGGAATTGCTGGCGT 58 19231702 19231782 CTGTAGAAAGTCGAGGTAGTCTC 59 NA Drosophila melanogaster 61 CG6763 FBgn0039069 FBtr0084378 3 1 1 92 3R 19111281 19111299 CTTCTCCATCAACGGACAG 58 19111419 19111439 ATATCGTAGTCGGAGAAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG17110 FBgn0039050 FBtr0084350 1 1 1 97 3R 18920428 18920446 GATTTCACGCTGAAGTGCC 59 18920502 18920580 ATCAAACCTAGTTCATCTAGTCCC 59 NA Drosophila melanogaster 61 CG6937 FBgn0038989 FBtr0084266 2 1 1 184 3R 18411077 18411159 GAAGGTTGTCAATAAGGCCG 59 18411306 18411324 AGTTGGAGAAGTCGATGCC 59 NA Drosophila melanogaster 61 CG13855 FBgn0038960 FBtr0084225 2 1 1 80 3R 18232127 18232148 TCCAACTGGAGATGAATAAGGA 58 18232186 18232261 GACGGTGTTTGTCATAGTACAC 59 NA Drosophila melanogaster 61 CG6690 FBgn0038918 FBtr0084149 1 1 1 60 3R 17737612 17737633 GCAGAGATGTCTTGATGAAGAG 59 17737651 17737672 CACAACATGAATATTGTCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 1 1 1 177 3R 17357663 17357760 ATGAAGGTGTGGAAACGAC 58 17357357 17357379 CCAGACAATTATGGATTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5871 FBgn0038870 FBtr0084050 3 1 1 80 3R 17045109 17045127 AAGGACGACTACAAGCACC 59 17045170 17045241 TGCAATGAGACTGGAAAGGT 59 NA Drosophila melanogaster 61 CG31223 FBgn0051223 FBtr0083965 3 1 1 91 3R 16656927 16657004 AAAGTGTCACTTCTGTCGC 58 16657059 16657077 CCTTGGACTTGTAGCATCC 57 NA InUTR Drosophila melanogaster 61 CG17270 FBgn0038828 FBtr0083994 3 1 1 81 3R 16642920 16643038 GCTAAATTCTATAACTCTACTGGGC 59 16642863 16642884 GTCATCCAGATCCATATTTGGC 59 NA Drosophila melanogaster 61 CG16953 FBgn0038809 FBtr0300803 1 1 1 80 3R 16409027 16409113 TTGTATCCAAGGATCCTATAACCG 60 16408970 16408990 CATTGAGTTTAAGCACCTCCC 59 NA Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 2 2 2 154 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865317 15865336 CGTTGATATAGTACTCCCGC 57 NA Drosophila melanogaster 61 CG10889 FBgn0038769 FBtr0083839 2 1 1 60 3R 15860513 15860533 ACCAAGTCAAATACCATCGAG 58 15860473 15860493 CTGAAAGATCCATTTGAGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10889 FBgn0038769 FBtr0083839 1 1 1 60 3R 15860513 15860534 CACCAAGTCAAATACCATCGAG 59 15860474 15860493 TGAAAGATCCATTTGAGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hs6st FBgn0038755 FBtr0083846 3 1 1 80 3R 15763020 15763041 CATCGAGAAGCTAAACAGTCTG 59 15756240 15762980 TTCAGATGTTCGAAACGCTG 59 NA Drosophila melanogaster 61 CG3581 FBgn0038697 FBtr0083775 3 1 1 60 3R 15200231 15200251 CTAACCAGATGGCAAATTCCC 59 15200191 15200209 ACTCGTAGAACTCCCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11703 FBgn0038690 FBtr0083744 1 1 1 60 3R 15053661 15053679 GGTTGGATGCGTATCACTG 58 15053619 15053638 CCACAATGCACACGATTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dlc90F FBgn0024432 FBtr0083575 1 1 1 69 3R 14125386 14125404 CTACTGGAACAACGACACC 58 14125437 14125455 AACGATGCAGTACATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0083604,FBtr0301556 2 3 6 158 3R 14080906 14081049 GTTTCCCAAAGTTGAGCCA 58 14080766 14080784 ACACTGCTATTCTGGTCCC 59 NA Drosophila melanogaster 61 CG17806 FBgn0038548 FBtr0083527 3 1 1 70 3R 13627735 13627753 TCTCAAGGACCACATCGTG 59 13627627 13627645 TGAAGAACGTTTGGCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5860 FBgn0038506 FBtr0083438 1 1 1 60 3R 13235695 13235715 GATGGAAGAAACTTCACACTG 57 13235736 13235755 CCTTCGATAGATAGCCAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4009 FBgn0038469 FBtr0083430 1 1 1 70 3R 12860535 12860553 CTTTAGATACGCCCACACC 58 12860418 12860439 TTCTATTAGATCTCCGATTGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Zip3 FBgn0038412 FBtr0083266 2 1 1 93 3R 12133112 12134062 AGCAGTTGACTTCCATTGG 58 12134119 12134137 GTCTCAGTCTCTTGGTGGT 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 CG31315 FBgn0051315 FBtr0083168 2 1 1 111 3R 11580846 11580864 AACTTCGTCTCGAGAGCAG 59 11580938 11580957 TTATGCACTGAATCCTCGAC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG3817 FBgn0038275 FBtr0083003 3 1 1 61 3R 10724690 10724708 TGTGCGATTCCAGAAAGAC 58 10724731 10724751 CTTTCTCGATCTCGAAATCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33330 FBgn0053330 FBtr0301689 3 1 1 184 3R 10619599 10620259 ATCGTTATACGCAATTTGGCC 59 10620400 10620423 GTATATTCGGTGTAGTACGAATCG 59 NA InUTR Drosophila melanogaster 61 CG31320 FBgn0051320 FBtr0082943 1 1 1 60 3R 10184472 10184490 AGCCGTTACCCTAAAGGTC 59 10184430 10184448 TTGATAGCGTTCCTCCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Crz FBgn0013767 FBtr0082927 2 1 1 67 3R 10140836 10140854 ATTTGCAGGATTGGAGCAG 58 10141094 10141112 AATCAGTGAACGTTGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9286 FBgn0038183 FBtr0082830 3 1 1 98 3R 9606884 9606965 TATAAGGGAAACGAGGAGGTG 59 9607025 9607043 AAGGAATAGTCGCTGCAGG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 3 5 5 138 3R 9476209 9476539 CAACAAGGGTGACTTTGAGC 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 CG31337 FBgn0051337 FBtr0082790 1 1 1 83 3R 9370324 9370342 ATGTACAAGGAGCACATGC 58 9370091 9370277 CAAATGATAGCCTTCGCGT 58 NA Drosophila melanogaster 61 CG33977 FBgn0053977 FBtr0100020 1 1 1 163 3R 9228614 9228632 CAAACGCCACTAACTACCA 57 9228401 9228419 GCCTCCTGAATTTCATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114500 1 1 6 219 3R 8521769 8521863 TATGAAGGCAATGGATGCCA 59 8522469 8522487 GTTGAGACTCCCGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Pros25 FBgn0086134 FBtr0082590 1 1 1 81 3R 8257373 8257477 GGCATTATAGCTTCCAACGG 59 8257521 8257539 GATGTACACTGTGCTGCTC 58 NA Drosophila melanogaster 61 Tim17a1 FBgn0038018 FBtr0082610 1 1 1 60 3R 8189861 8189879 GATAGTCATCAAGCCGCAG 58 8189819 8189839 CTTCGGATCAATAGTCTCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12256 FBgn0038002 FBtr0082621 3 1 1 84 3R 8051231 8051311 CCTGTAATGGCGATTCTGG 58 8051165 8051183 GCAGTTCCATAGGAGACGA 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 CG3281 FBgn0260741 FBtr0082511 2 1 1 95 3R 7788346 7788365 ACCAATCTGTATGTCCACGA 58 7788217 7788290 CCATGTCCACTTCAATTTGGA 58 NA Drosophila melanogaster 61 I-t FBgn0025821 FBtr0082427 1 1 1 60 3R 7530020 7530040 AAGTTGGAGACGGATAGTCTG 59 7530059 7530080 CGGAGATGACAATCGATAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18476 FBgn0037931 FBtr0082443 1 1 1 80 3R 7503176 7503194 GAAATGGAACCCAGAAGCG 59 7503059 7503134 ATTATCCAGGGAGTCTTCGTC 59 NA Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 3 2 2 105 3R 7059034 7059132 GAGAATCGCATTAAAGTGATGC 58 7058950 7058968 ACTGCTTCAGAGTGCTCTC 59 NA Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 3 1 1 65 3R 7000612 7000862 GAGTTTGAGGAATCCGTTGG 59 7000566 7000588 CGACATAGAACTAATTTCCTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CheA86a FBgn0261291 FBtr0091686 3 1 1 65 3R 6970740 6970823 CAAGTTATTGTTGCAGGCAC 58 6970694 6970712 TTCTCTTCACTGGTCACCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201,FBtr0300045 1 2 2 66 3R 6675706 6675724 CATGTGCAAGTGTCTGGTC 59 6677018 6677037 AACAAGCACACTAATTGCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4089 FBgn0037838 FBtr0082281 3 1 1 91 3R 6642582 6642602 GAGTACAAGATGCTGCAACAG 59 6642655 6642731 CTCATTGGATCGCGAATGG 59 NA Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 2 1 1 69 3R 6133008 6133026 CAGTCGTAGTGGTGAAGGG 59 6133058 6133232 GAAGATGCAGAAGCCATTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3999 FBgn0037801 FBtr0082225 1 1 1 80 3R 6077623 6077641 CTCACAGAGAAAGCTGTGC 58 6077684 6077906 TAGCTCGTGCTCATTCAGAG 59 NA Drosophila melanogaster 61 CG16899 FBgn0037735 FBtr0113209 3 1 1 105 3R 5554043 5554061 GGTCTTGATGTGCAACAGG 59 5553804 5553894 CAATTATAGCCTGTCTTATGAGGG 59 NA Drosophila melanogaster 61 Vps45 FBgn0261049 FBtr0082070 3 1 1 88 3R 5389762 5389782 CGGCATTAAGTTGTACATCGA 58 5389829 5389913 TTATACTGGTCGTCTCCTTGTC 59 NA Drosophila melanogaster 61 Vps16A FBgn0261241 FBtr0081979 3 1 1 80 3R 5094543 5094563 TTTAAATCTGCCCGAATCGTG 59 5094604 5094679 GCCACTTCAGTATCATTGGG 58 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 2 2 2 131 3R 4445732 4446036 TACTCCAAGAATCACGCCTC 59 4446130 4446148 GGTCAGGCAATATGTCAGC 58 NA Drosophila melanogaster 61 Gfr FBgn0037567 FBtr0081863 3 1 1 84 3R 4128723 4128794 AAATCAAGGTCACATCCGC 58 4128657 4128676 TAGTACTGAGTGGCGATCAC 59 NA Drosophila melanogaster 61 CG2616 FBgn0037512 FBtr0081738 3 1 1 102 3R 3548852 3548871 ATTTCGTGGCCTATGAACAG 58 3548934 3549433 TTGGTATCCCTGATTTCAAGG 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 1 4 11 85 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734446 2735015 ATGGTTCTGATGGACCTGC 59 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081618 2 1 3 105 3R 2588652 2588672 TCTTCATCGGCAAATACACTG 58 2589574 2589593 ATAAGACCGATTAGAAGCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 glob2 FBgn0250846 FBtr0301286 1 1 1 83 3R 2433918 2434063 ATATGAGGATGCTGGCCAC 59 2433853 2433874 TGCTTAGTGAACATGAGTTGTG 59 NA Drosophila melanogaster 61 Osi13 FBgn0037422 FBtr0078605 1 1 1 129 3R 2117868 2117886 ATATGCTGGAGACCTGGTC 58 2118214 2118232 TTCAGGATCAAGGGTAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Osi8 FBgn0037415 FBtr0078598 3 1 1 89 3R 2081456 2081768 ACGCTACAGGTGAAATTCGA 59 2081820 2081838 AATCATGATCATTGCGCCG 59 NA Drosophila melanogaster 61 Pbprp3 FBgn0011281 FBtr0078656 3 1 1 131 3R 1798843 1798940 TGACGAGAACTATCCACCG 58 1798303 1798322 TTCTCGTCCTCGTGAATCTC 59 NA Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078680 1 1 2 164 3R 1293861 1293932 TATCCGACCAAACTGGCTG 59 1294060 1294078 AATCTTGCCAGGATTGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0078788,FBtr0100433 1 2 2 80 3R 1200874 1200895 GCAACATATTCATTCACATGCG 59 1200936 1201015 CCTGGTTTCTTGTCAGCTC 58 NA Nonspecific Drosophila melanogaster 61 CR34262 FBgn0085291 FBtr0112457 1 1 1 80 3L 21952869 21952946 GTGCCAGCAGATAACTACG 58 21952988 21953008 TAAGATCTGGAAACTGCAGGT 59 NA Nonspecific Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 3 3 3 84 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718717 TATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 CG14562 FBgn0037142 FBtr0078472 1 1 1 85 3L 21941732 21941750 GTGTTGCCCAAGAACTTGG 59 21941798 21941962 GTAAACCCGCAAGACTTTCC 59 NA Drosophila melanogaster 61 CG32448 FBgn0052448 FBtr0290247 3 1 1 65 3L 21821085 21821171 GAACAAGATTATCATGGGCCT 58 21821040 21821058 ATATACGCGATGTAGCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 2 2 2 135 3L 21626118 21626136 TCATCACTGCCCTTCACTG 59 21625925 21626025 CAGTGCTGTCCATATCATTATACTG 59 NA Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 1 2 2 91 3L 21504343 21504421 CTGATATGGATCGAAGCTGTG 58 21504474 21504492 AGAAATCCGACGAACAGGA 58 NA Drosophila melanogaster 61 Cpr78Cc FBgn0037069 FBtr0078338 2 1 1 127 3L 21293725 21293813 TTAAGCTATCGCTCTGCCT 58 21293904 21293922 GTATTGGTAGTTGCCCTCG 58 NA Drosophila melanogaster 61 Cpr78Cb FBgn0037068 FBtr0078337 3 1 1 214 3L 21288615 21288634 TTGTGTATAGCTGACAGTGC 58 21288894 21288912 AACACTCCTTCGTCATCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10566 FBgn0037050 FBtr0078292 2 1 1 80 3L 21125723 21125742 AAGGATCCACAGAGGAAGTG 59 21125785 21125864 TGTCCTGGTACTCGTTAGC 58 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078252 2 1 3 138 3L 20791787 20791806 CGAGCATAGCAGATTTGGAG 58 20792331 20792349 ATAGTTATCCTGCAGGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4289 FBgn0037020 FBtr0078251 1 1 1 80 3L 20772437 20772457 ATCAGGGAAATCATCCATTCG 58 20772499 20772789 CGCAATGTATTGCTTCCAG 57 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0113436 2 1 5 108 3L 20491482 20491500 CGATGATATGCCAGATGCG 59 20503137 20503155 CATTAGCTCGACGTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5955 FBgn0036997 FBtr0078197 2 1 1 87 3L 20461484 20461504 CAAGTTTGGACTGGACTTCAG 59 20461553 20462076 CACAGCGTAATCTGTGGTG 58 NA Drosophila melanogaster 61 CG32226 FBgn0052226 FBtr0074846 2 1 1 83 3L 20291356 20291374 GATGTCGTCTTAGCAGCAG 58 20291233 20291310 CTTCATCCAATACCTGCAGG 58 NA Drosophila melanogaster 61 CG17732 FBgn0036923 FBtr0074898 3 1 1 82 3L 19974801 19974823 CAGAATCCAAGTTTCTGTCTGAG 59 19974865 19975227 CTTCTTGGTTTCAGCACCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14104 FBgn0040786 FBtr0299563 3 1 1 62 3L 19800181 19800199 TGAAACGTCAGAGGGTCAG 59 19800137 19800156 TTTAGGTCGTTGTACTCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 1 2 2 80 3L 19799486 19799506 TCAAGTGAACAGTGAAAGCAC 59 19799548 19799623 CGTATGCTTTCTTGCCTGG 59 NA Drosophila melanogaster 61 CG14103 FBgn0036908 FBtr0074927 3 1 1 184 3L 19797505 19797590 TTCAATGTGCTTTGGTGGT 58 19797284 19797303 TGTAGGTATCGCAGATTGTG 57 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074944 3 1 3 198 3L 19594913 19594931 ACAGCGTTGATGGAATCGA 59 19595158 19595771 TCTGGTATGGCGAAACTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Taf6 FBgn0010417 FBtr0074941 2 1 1 111 3L 19593042 19593063 AGTTAAGGTCAATGTGGTTCAG 58 19593133 19593215 TTCGTGGAGGTATTTCTCCAG 59 NA Drosophila melanogaster 61 CG9231 FBgn0036887 FBtr0074972 1 1 1 80 3L 19578775 19578861 CCAATTTCGTTAGTCAGGATGTC 59 19578717 19578737 TGAGTGCGATCATTATGTTGG 58 NA Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990,FBtr0074989 2 2 2 124 3L 19254668 19254687 AGCCAAGAAGCGTATATCCC 59 19254879 19254897 TGAAGGGTGCTGGTTTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075044 1 1 4 219 3L 18985820 18986838 GATTCGCTCAAAGTGTGCC 59 18985619 18985637 TAGAGCCACACTTCTGGAC 58 NA DesignRelaxed Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 3 2 2 86 3L 18745982 18746125 CAGTGAATGACAAATTCAGAGG 57 18745917 18745935 TGGTGTACAGGTGATCCTC 58 NA Drosophila melanogaster 61 CG7330 FBgn0036780 FBtr0075127 1 1 1 80 3L 18142288 18142306 CCGTAATCGTGCTATCCGT 59 18142344 18143791 GAGATCTATATGTACTGGGACTGAG 59 NA Drosophila melanogaster 61 CG5147 FBgn0036775 FBtr0075136 3 1 1 80 3L 18101616 18101688 CACTTAAGGACACTTTGGCAG 59 18101556 18101575 GAGGTTCCTCTAAACTGGCT 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151,FBtr0075148,FBtr0075150,FBtr0075149 2 4 4 134 3L 17948142 17948325 GCAGCAGATCGGAATACTC 58 17948026 17948044 TCTAGCTTTCTGTAGCGGG 58 NA Drosophila melanogaster 61 CG14353 FBgn0036771 FBtr0075144 3 1 1 197 3L 17901441 17901459 TTTGTGATTCTGGGCTCCA 59 17901618 17901694 CTCCATATCCAGAACTTGCAG 58 NA Drosophila melanogaster 61 CG34002 FBgn0054002 FBtr0302155 3 1 1 81 3L 17852832 17852851 TGAACGCATGGTATGATCAG 58 17852893 17852985 CCAATCTCCTTCTTAGCTGTG 58 NA Drosophila melanogaster 61 CG6034 FBgn0036750 FBtr0075194 1 1 1 60 3L 17739256 17739276 AATTCTAGCGATAATCAGCCC 58 17739216 17739234 TGTTGAGATGCACATGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7589 FBgn0036727 FBtr0075221 3 1 1 80 3L 17465583 17465601 AACAGACCCAGCTAATCCA 58 17465642 17465723 CATCAGAGTCGTATTCAAATGG 57 NA Drosophila melanogaster 61 CG12229 FBgn0036723 FBtr0075226 2 1 1 60 3L 17427837 17427855 ACACCAAGGATCTCAACGA 58 17427795 17427817 CTCATAAAGTCCACTCCAAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12229 FBgn0036723 FBtr0075226 1 1 1 60 3L 17427837 17427856 TACACCAAGGATCTCAACGA 58 17427796 17427817 TCATAAAGTCCACTCCAAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 2 2 2 83 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330774 17330854 GGAATATTATAGCTGCATCGGT 58 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 1 2 2 82 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330775 17330856 GAATATTATAGCTGCATCGGTGG 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291,FBtr0075292 1 2 2 80 3L 17014032 17014052 CCCTAGAGGAATCAATGGAGG 59 17013905 17013993 GTACACTAATGTCCTCATCGTC 58 NA Drosophila melanogaster 61 PGRP-SB2 FBgn0043577 FBtr0075320 1 1 1 110 3L 16719910 16719928 ATGGTCGAATCTACGAGGG 58 16720000 16720080 GTAATCCAGTCTGGAAGTTGC 59 NA Drosophila melanogaster 61 Lasp FBgn0063485 FBtr0075350,FBtr0100145 3 2 2 64 3L 16674041 16674349 AAATTTACACAGGTGGCCG 58 16673995 16674014 GATATGTGCTTCGTGTTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418,FBtr0075420 1 4 4 97 3L 16375505 16375523 ACTGGACGGCCTTTATCAC 59 16375202 16375222 ATTAGATGCCTTGCTGATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 roq FBgn0036621 FBtr0075423 1 1 1 126 3L 16370273 16370291 TCTGCTGCAATGAATTCGC 59 16370100 16370183 ACAATCACGGTCTGATCGA 58 NA Drosophila melanogaster 61 CG4982 FBgn0036598 FBtr0075469 3 1 1 97 3L 16294578 16294661 GCGAAGATGTTCAAAGTTGTG 58 16294719 16294738 TATTCCACGTGCTCATAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33690 FBgn0053690 FBtr0091670 3 1 1 124 3L 16194795 16194813 TCTATCCTACGATGGCTGC 58 16194898 16194983 CGATAAGATCGTGATCATAGGG 58 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 1 2 2 81 3L 15551210 15551361 AAGTGACTGTGACAGATCGT 59 15551405 15551423 AGGTCAATGGTCGAGTCAC 59 NA Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 1 1 1 61 3L 15520857 15520876 GTGGAGCAATGTCCTATTGG 58 15520586 15520833 AAGAGTCCACCACAAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 2 4 4 142 3L 15505710 15505729 TTCTGTACCACGATGAGGAG 59 15505834 15505911 ATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 CG13458 FBgn0036479 FBtr0075637 2 1 1 81 3L 15108000 15108018 GCACATGAAAGACGACCAG 59 15108062 15108152 GAACATCTCGTGACCATTGC 59 NA Drosophila melanogaster 61 CG13463 FBgn0036470 FBtr0075631 3 1 1 60 3L 15048280 15048298 AGATTTCCCAGAGTGACGA 58 15048321 15048340 TCAGTTTGATCCTCCTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3919 FBgn0036423 FBtr0273239 2 1 1 113 3L 14404808 14404826 CGTAGAGGCAATCCTCGAG 59 14404902 14405145 AATTGTGTTGCCTCAACGTC 59 NA Drosophila melanogaster 61 CG8757 FBgn0036380 FBtr0075803 3 1 1 113 3L 13834805 13834826 TTCCCTCGCTAAACATTTATCC 58 13834621 13834731 GACTGACTGTCGAAACCCT 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075823 1 1 4 80 3L 13462163 13462247 CACATGGGAAAGGTCTTGC 59 13462101 13462121 CTTGAATCTTTCCAGCTGAGC 59 NA Drosophila melanogaster 61 CG11279 FBgn0036342 FBtr0075887 1 1 1 82 3L 13040199 13040217 AAGAAGGCCAAGCTACCAG 59 13040263 13040344 ATTGGCGCATTTGATCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG32107 FBgn0052107 FBtr0075937 3 1 1 60 3L 12853136 12853156 TCGTCTCTATTGCATAGGCTG 59 12853096 12853116 TGAATTGTGCATTGTAGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237,FBtr0075938 2 3 3 81 3L 12838206 12838226 AAAGTCGAATCATGAGGAGAC 57 12838013 12838164 CTTGAAAGTCACCTCTTCCG 58 NA Drosophila melanogaster 61 sti FBgn0002466 FBtr0075970 2 1 1 80 3L 12506918 12506994 AGTATGCCTTTCAGGATAACG 58 12506858 12506877 GTGACATCAAGCTGAGAAGG 58 NA Drosophila melanogaster 61 CG6071 FBgn0036186 FBtr0076136 1 1 1 80 3L 11638596 11638617 AACATAACATTAGTGCACGACC 59 11638469 11638559 GATCTCCTTGTATGGTTTCTCCT 59 NA Drosophila melanogaster 61 CG7638 FBgn0036133 FBtr0076210 1 1 1 80 3L 11103438 11103459 CTTCACCGAATATCAATGGCTG 59 11103500 11103618 TAGAAGTGGAACAGCTCGG 59 NA Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 2 2 2 137 3L 10631790 10632322 CCTAACATTGGTCGTCCTG 58 10632423 10632441 GGCTTGAGTATCAGCTTCC 58 NA Drosophila melanogaster 61 Ir67c FBgn0052058 FBtr0076293 2 1 1 60 3L 10425746 10425765 CATGGATTACCGTATGTGGA 57 10425705 10425725 TACCAGATTCAAAGATTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 3 1 1 70 3L 10209381 10209460 GTTCTGTTTCGCATCAAAGG 58 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 1 1 1 60 3L 10145185 10145255 ATATGATGTTCGATGAGAGCTG 58 10145275 10145294 CGGAAATAGGCCATGTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349 2 1 5 233 3L 9965485 9966199 ATTAAACAGCCAGGCTGGT 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 2 3 3 81 3L 9721521 9721612 ACGAGAAGAGAAGATTTACGCT 59 9721654 9721672 TAGGTGAATCCGTCCTTGC 59 NA Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 2 2 2 60 3L 9366370 9366389 GAAATCGAGTCTTGGAAGCA 58 9366411 9366498 ATCACCACATTGCTGTATCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 1 2 2 82 3L 9366349 9366367 TCATATTCACCTGCCGGTC 59 9366411 9366499 GATCACCACATTGCTGTATCC 59 NA Nonspecific Drosophila melanogaster 61 CG32032 FBgn0043806 FBtr0076529 2 1 1 80 3L 9087293 9087675 GTCTCAGTTTAGATGAGCTGC 58 9087717 9087735 AAACCTTGCGAATGGTCTC 58 NA Drosophila melanogaster 61 CG34427 FBgn0085456 FBtr0112728 1 1 1 89 3L 8798601 8798619 TAACTCCTGCCCAGATGTG 59 8798672 8798756 AACTAATGTAGCGCTGGCA 59 NA Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 3 2 2 84 3L 8397257 8397277 GCATAGAGAAGGAGATGAGGG 59 8397141 8397211 ATGTCGCTCTCCTTCAGTG 59 NA Nonspecific Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 1 2 2 80 3L 8343181 8343258 TCCTTCATATGCCTGAGGA 57 8343301 8343320 CTTTGTAGAGATCACGGAGC 58 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076697 2 1 2 153 3L 8195960 8196043 TGAAATTCATCGCCGTCTG 58 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076765,FBtr0076764 3 2 2 86 3L 7969105 7969123 ATGATCGTCAAGATTCCGC 58 7969037 7969055 CTTTCGGACCTGGTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32365 FBgn0052365 FBtr0076746 2 1 1 167 3L 7863000 7863018 CACCGCCAACATGATACAC 59 7863149 7883152 AAGATGTTGGCATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302841,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112693,FBtr0302840,FBtr0112702,FBtr0302843,FBtr0112698 1 11 15 85 3L 7649296 7649488 GAATATTTGGCTAGACAAGGCG 59 7649232 7649250 TCAGAGCCGGTAAAGATGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8564 FBgn0035776 FBtr0076869 2 1 1 83 3L 7379772 7379854 GCACCAAGAATCCCAAGTG 59 7379707 7379727 CGTAATTTCGGTTGCAATCAG 58 NA Drosophila melanogaster 61 CTCF FBgn0035769 FBtr0076878 1 1 1 99 3L 7347074 7347154 CTTTGGTTTCGAGGACGAC 58 7346993 7347013 AATCATATCCATCAGCTGCAG 58 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 2 5 5 99 3L 7333783 7333801 CAGAGATCGCATGTACGGT 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 3 9 9 84 3L 7176527 7176546 AGGAATTGGTACGAGTGGTC 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 Cpr65Ea FBgn0035735 FBtr0076929 1 1 1 127 3L 7079582 7079666 GTACAAGCTCCTTCTCGTC 57 7079473 7079491 CCTGCTCGATATCATAGGC 57 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 1 1 1 60 3L 6659884 6659968 CATAAGGAAACTGCTAGAACGA 58 6659845 6659866 TGATACGTTCCCAAATTTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF4E-4 FBgn0035709 FBtr0076963 1 1 1 80 3L 6658158 6658177 CGTTGGGTCATCAATATGGG 58 6658017 6658117 GCCAATCAGTATGAGTAGCAC 58 NA Drosophila melanogaster 61 CG8270 FBgn0035703 FBtr0076967 2 1 1 81 3L 6482447 6482466 GAAGGAAACTCCCTGATTCC 58 6482510 6482584 GACTTGGATTGCCCAAGTC 58 NA Drosophila melanogaster 61 CG13298 FBgn0035692 FBtr0077015 2 1 1 104 3L 6185991 6186079 AACAAGCGCAACCATATCC 58 6185905 6185925 GCCGAATATGTCGTACATCTC 58 NA Drosophila melanogaster 61 CG10478 FBgn0035657 FBtr0077069 2 1 1 147 3L 6003671 6003759 CAAATTTAATTGCGAAGGCTGG 59 6003545 6003567 CCGTGTCTTATGATATAGTCACG 58 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 1 2 6 133 3L 5763026 5764728 TGGACATGACAATAACGGC 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 Txl FBgn0035631 FBtr0077098 2 1 1 113 3L 5759808 5759885 GGATCTAAGCCTGGCTCAG 59 5759960 5759980 CCTGACTGATTGTTCTTCACG 59 NA Drosophila melanogaster 61 mthl2 FBgn0035623 FBtr0077088 3 1 1 80 3L 5598658 5598679 ACAACTCCATTCGCATTATACC 59 5598719 5598800 ACGATGTGATCATCACAACG 58 NA Drosophila melanogaster 61 bc10 FBgn0040239 FBtr0077084 2 1 1 193 3L 5558417 5558435 GAGCATCTAAACGACCCGA 59 5558746 5558765 GGTATCAGTAGTACGGGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599,FBtr0077172,FBtr0077175,FBtr0077173,FBtr0077174 2 5 5 80 3L 5156243 5156458 AGGTAGATGATCAGACTTCGT 58 5156183 5156204 GTTTGTATGAGGTTACTCCCAG 58 NA Drosophila melanogaster 61 CG15213 FBgn0040843 FBtr0077182 2 1 1 148 3L 5126166 5126243 GAAGTTCTTGCTCCTGAGC 58 5126036 5126054 TGAGCAGGAAGGATTGGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS6 FBgn0035534 FBtr0073288 2 1 1 152 3L 4364710 4364728 TACGAACTAGCACTGGTGC 59 4364910 4364928 GTGTTCGCTGACTTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32250 FBgn0052250 FBtr0073287 2 1 1 77 3L 4319095 4319113 CTTTGTGCATGCCGTATCC 59 4319230 4319248 GAACGCACTGTATCCAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 dro6 FBgn0052268 FBtr0073080 1 1 1 61 3L 3336304 3336322 TGATGATGGTCATCCTGGG 58 3336261 3336279 TCTGTACCTTCCGGAAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14961 FBgn0035439 FBtr0073069 2 1 1 122 3L 3330546 3330564 GAGTCCTCATAGTGGCCAG 59 3330649 3330724 GATGACTCGTAGACCGTCTC 59 NA Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 2 2 2 154 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324491 3324510 AGGGTCGGTAGTACTGAGAG 59 NA Drosophila melanogaster 61 dro2 FBgn0052279 FBtr0073059 3 1 1 70 3L 3314414 3314433 ATGACAATTGTTGTCCTGGC 59 3314466 3314484 CAGGGACCCTTGTATTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1291 FBgn0035401 FBtr0073023 1 1 1 60 3L 3144566 3144584 ACACCCAGTACTTTGACCA 58 3144608 3144626 TCGTCCAGTAAAGCAGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 3 3 4 83 3L 3054406 3054427 GAGCATAGTATTTCGTCTGGTG 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 3 2 2 80 3L 3039189 3039210 AAGTTACTCCAAGAACTGACTG 58 3039248 3039337 AATGTGAAAGACCGTATAGTCC 58 NA Drosophila melanogaster 61 CG32487 FBgn0052487 FBtr0073007 3 1 1 94 3L 3016371 3016457 TATAGGAGACACCATGTGCA 58 3016296 3016316 CATCCTGATAGCTGTTAACCC 58 NA Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 1 2 2 84 3L 2593492 2593571 GAATGTGGATCGCAGTACC 58 2593619 2593637 TTTAGAGAATCGCTGCGAG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG13807 FBgn0035323 FBtr0072878 3 1 1 136 3L 2263195 2263213 CACAATCGCTACAACGGAC 59 2263372 2263392 CGATCGATGTGATCGTATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42356 FBgn0259702 FBtr0299955 1 1 1 101 3L 2022471 2022489 TAGAACATTGCCACAGGCT 59 2022336 2022409 GCACAGTTATTTGAGAACAGCA 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 2 5 5 99 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743974 1743992 CTTGAGCAGAACAGGATCC 57 NA Drosophila melanogaster 61 CG17249 FBgn0035249 FBtr0072810 1 1 1 60 3L 1647023 1647043 GTAGAGGAGAAAGACGATGAG 57 1646983 1647003 GTTTCTCTATTTCTACGGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 1 5 5 99 3L 1635217 1635235 GATGATCATCATGGGCGTG 58 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12091 FBgn0035228 FBtr0072831 2 1 1 111 3L 1535938 1535956 CTTCCAACTGTCATTGCCG 59 1535845 1535863 AATGAGAATCACGTCGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9139 FBgn0035202 FBtr0072663 3 1 1 127 3L 1296723 1296743 ACCAAAGTCTCAGACATTGTG 58 1296829 1296923 GGACTGAAGAGAAATTTGTGGT 59 NA Drosophila melanogaster 61 CG13891 FBgn0035139 FBtr0072566 3 1 1 60 3L 433323 433341 GTCGCCCAGTGAAATAAGC 59 433281 433303 GTTCTCTTCTCTAATAGGCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0072543,FBtr0301817 1 6 6 80 3L 354428 354504 TACCGAGACATATCACCATATGAC 59 354541 354561 GTAGTTGGCGTTGATGTAGTC 59 NA Drosophila melanogaster 61 CG42377 FBgn0259744 FBtr0299980 2 1 1 80 3L 278322 278412 CAAAGTTAAGACCAAAGACCGA 59 278451 278471 CTTATGTCCTCTGTGTAGGCA 59 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498 1 1 3 80 3L 225902 226225 CGTTGTAGAATTACTGACTGCTG 59 226263 226283 TTTGTTCGCAGCTGATATACC 58 NA InUTR Drosophila melanogaster 61 mthl8 FBgn0052475 FBtr0072462 3 1 1 80 3L 24893 25093 TGGACATACGCCATATGTCTC 59 25130 25153 CATTTCCGAACACATAAGGTAGAC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-841d FBgn0083016 FBtr0113524 3 1 1 60 2R 17218460 17218481 TTGTTAGTTTGCCAGATCAAGG 59 17218499 17218520 AAATTGGTAAGAACTCAGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347a FBgn0083054 FBtr0113513 1 1 1 78 2R 14030353 14030374 GACTAAGATTCAATGTTGCCAG 57 14030413 14030431 TCTACTTCTGTGGATGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-G2703c FBgn0082929 FBtr0113510 2 1 1 60 2R 10511518 10511538 ATGATGACAATACAGTCCGTG 58 10511557 10511578 ATGACTTATCAAACAGCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113118 1 1 3 118 2R 20849265 20849878 GGAGGGAGCTCAGAAACTG 59 20849165 20849186 GTCGTCCATAATGTTGACAGTC 59 NA InUTR Drosophila melanogaster 61 CG15861 FBgn0035084 FBtr0072410 1 1 1 88 2R 20831281 20831356 ATCTGTGATCACAACTGCG 58 20831211 20831229 TTGTGAGCATAATGGTGCT 57 NA Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130,FBtr0072372 3 2 2 62 2R 20651087 20651106 ATCTTCTTGGTGGAGATCGA 58 20651131 20651149 GAGACCAAGACGCATATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13587 FBgn0035031 FBtr0072314 2 1 1 95 2R 20485872 20485894 CTGAAGTGTCCTCAGAATAACAC 59 20485949 20486024 GTTCCTTACGACTGTTGGC 58 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 1 3 3 80 2R 20398310 20398390 ACGATATTCGTAAGGTGTTGG 58 20398250 20398270 GACTGATGAGTTCCTCAATGG 58 NA Drosophila melanogaster 61 CG13579 FBgn0035010 FBtr0072298 2 1 1 81 2R 20375592 20376269 CTGATGCCGAACAAATGCT 59 20376311 20376332 CGAAATCGTTAGCATTGATGTG 58 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273 3 1 2 117 2R 20046598 20046681 GGATATGTGCTTTCTCGAACG 59 20046501 20046519 TTGGAGAGCTGGACAAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 3 2 2 82 2R 19946584 19946603 AGACTTGAAGGTTCCAGAGG 59 19946648 19946728 GAACGGTGCACAGTAAGTC 58 NA Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 3 2 2 117 2R 19868163 19868181 CGGCCATGAAATGACACTG 59 19868261 19871078 ATGTTTCTTGGTTCGAGTCG 58 NA Drosophila melanogaster 61 CG5539 FBgn0034907 FBtr0072123 3 1 1 60 2R 19692535 19692553 ATAAGACTCTGAACAGCGG 57 19692574 19692595 TAAACTATCCAGTATTTGGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072101,FBtr0072100 2 2 2 112 2R 19572891 19573002 AAAGATGTCCGTAGTGCCA 59 19572797 19572815 CATCCCTCTTCAGTCCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 3 1 1 83 2R 19492460 19492604 CAAGCCAATCCAACTGCTG 59 19492395 19492413 TAGCGGTGGCTATCATCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pi3K59F FBgn0015277 FBtr0072064 3 1 1 80 2R 19448156 19448249 CAAATCAAGGTAGGGACGC 58 19448291 19448311 GAATCTCAGGATCGGATCCTC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 2 10 13 138 2R 18814848 18814866 TGGCTACCGTTCTACTACG 58 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 3 2 2 81 2R 18798376 18798394 TCGATCGACCTGTACTGGA 59 18798438 18798513 TGATAAGACTGGGCTGTGAC 59 NA Drosophila melanogaster 61 CG3501 FBgn0034791 FBtr0071907 1 1 1 89 2R 18769953 18769971 ACCAGTGCCTGTATGTCAC 59 18769401 18769420 AGCCTGCGATTACTAATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 ppa FBgn0020257 FBtr0071924 3 1 1 60 2R 18575401 18575420 CCTCTGTAAACAGATCACGG 58 18575360 18575379 AAGATTCCTTAGATGCTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859,FBtr0071858 3 2 2 183 2R 18519322 18519408 AATGGAAGAAGGAAGAGCCT 58 18519554 18519572 CTAGCAGACTAGTCACGGC 59 NA Drosophila melanogaster 61 CG11362 FBgn0034737 FBtr0071836 3 1 1 194 2R 18449931 18450010 TTTCTTGGGAATCACACTCG 58 18450167 18450185 CTCTTTCCCGGGATATCCC 59 NA Drosophila melanogaster 61 CG4752 FBgn0034733 FBtr0071832 3 1 1 82 2R 18366313 18366334 TCTATACAAGTCCGTAGTCGAG 58 18366377 18366451 CTTTCCAGCTGTGGTTGAG 58 NA Drosophila melanogaster 61 mRpS29 FBgn0034727 FBtr0071842 1 1 1 60 2R 18307274 18307294 ATGATTGACCTGCCATTTGAC 59 18307234 18307255 GTCCATTCTGAGTCTTGAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 T3dh FBgn0017482 FBtr0071848 3 1 1 101 2R 18219131 18219364 TACGCCTTCGAGATGTCAG 59 18219048 18219067 CAAACAAACCTTCCGAGCTC 59 NA Drosophila melanogaster 61 MED16 FBgn0034707 FBtr0071770 1 1 1 60 2R 18071661 18071681 TTTATAGCCTACGCTTGTCCA 59 18071702 18071721 GTGTCAATGTCCATTGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NtR FBgn0029147 FBtr0071762 2 1 1 82 2R 18016976 18017059 ATTTGCCGTTGATTGCCTG 59 18017103 18017123 GATGAGAATGAGGGAACTCCT 59 NA Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0300693 3 1 2 95 2R 17982093 17982112 GCGTTCAGTTTGAGATACCC 59 17980211 17982035 TCGGCGTGTTATCAATGTG 58 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 1 2 2 158 2R 17969993 17970011 ATCTTCCGACAGATGTGGA 58 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 Fili FBgn0085397 FBtr0112593 2 1 1 116 2R 17817845 17821945 ATAATCTCACGATGGTGCCT 59 17822024 17822042 GAAACAGGTTCAGGAAGGC 58 NA Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071717 1 1 2 136 2R 17691060 17691133 TTTGTTGGACAAGTCGCTG 59 17691233 17691251 GATGACAAGGACTTACGCC 58 NA InUTR Drosophila melanogaster 61 CG34204 FBgn0085233 FBtr0112397 2 1 1 109 2R 17684154 17684235 CAATAACATTTCTCGAGCCCG 59 17684306 17684324 CACCGCATTTGTGAGACTC 59 NA Drosophila melanogaster 61 CG9752 FBgn0034614 FBtr0071616 3 1 1 70 2R 17182795 17182813 TCTTTGTGTTGGACACCCT 59 17182687 17182708 GCCATCGACCTTATATTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Xbp1 FBgn0021872 FBtr0300236 1 1 1 136 2R 17031625 17031710 GAGAAAGTGCAAAGAAAGAAGC 58 17031804 17031825 CACTTGTTCTGTAGTATTTCCG 57 NA DesignRelaxed Drosophila melanogaster 61 Cht12 FBgn0050293 FBtr0071544 3 1 1 91 2R 16951645 16951723 AGCTGGGATTAATCTTTCGGA 59 16951574 16951596 GATATTGTAGCTTTCCAGGATGC 59 NA Drosophila melanogaster 61 hbn FBgn0008636 FBtr0071556 2 1 1 80 2R 16845886 16846056 GTAAAGTTCGAAGATCTCGCAC 59 16845827 16845847 GATACTGGGTCTTCTCGAAGG 59 NA Drosophila melanogaster 61 CG13442 FBgn0034546 FBtr0086240 3 1 1 84 2R 16616808 16617431 GATAATCCCGAACAACTCGTG 59 16616744 16616762 TAATCCAACACTCCAGGCA 58 NA Drosophila melanogaster 61 CG16799 FBgn0034538 FBtr0086249 1 1 1 83 2R 16540897 16541052 ATGTGAAGACTTCTCCAATGAC 58 16540835 16540853 CAGTATTTGAAGCCCTCGC 59 NA Drosophila melanogaster 61 CG11192 FBgn0034507 FBtr0290122 1 1 1 60 2R 16242236 16242254 CCCACGGCGATTATAATCC 58 16242194 16242212 CCATTCAAGATGAGCAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CkIIbeta2 FBgn0026136 FBtr0086278 2 1 1 210 2R 16177539 16177560 CCATTGGTTTGAGTGATAATCC 57 16177730 16177843 TTAAAGCCATAAAGCCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11044 FBgn0034484 FBtr0086313 2 1 1 80 2R 16121320 16121340 CAATCTGGTGAATGTGACCAC 59 16121382 16121458 GATATGGTGAGCACCTGCA 59 NA Drosophila melanogaster 61 Or56a FBgn0034473 FBtr0086344 2 1 1 80 2R 15657938 15657957 CACTTGCCTCATGAAGTACG 59 15657813 15657900 TTAAGTCGGGTAATATCCATCTCC 59 NA Drosophila melanogaster 61 CG10081 FBgn0034441 FBtr0086524 3 1 1 80 2R 15275574 15275597 GTATAACAGCTACCTCTTCTACTG 58 15275636 15275716 TCAGGATTGGTGTCCACTC 59 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 1 2 2 80 2R 15266696 15266778 CCTTAATTCATGCCCATCGTC 59 15266814 15266838 GCGGATAAATATACAATCCAGACTC 59 NA Drosophila melanogaster 61 CG10051 FBgn0034437 FBtr0086521 3 1 1 81 2R 15254197 15254279 GAATGGAAAGACTCTGCTCG 58 15254322 15254341 GTTTAGACAGCTGGGTAAGG 58 NA Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504,FBtr0086503 2 2 2 80 2R 15104012 15104253 ATAACCGCAATCGAACTGG 58 15104296 15104315 CTTCGACATCAGGAATAGGG 57 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0086584,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 3 6 6 89 2R 15048399 15048491 AAGAATAAGGTCACCACCTCTG 59 15048541 15048559 GCTTCGTCCTATGGTTCCA 59 NA Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 2 2 2 132 2R 14617038 14617257 TGTACTTTGAACGTGAGATCCT 59 14616927 14616945 TTAATGCCGCGAATGAGGA 59 NA Drosophila melanogaster 61 CG15087 FBgn0034380 FBtr0086647 3 1 1 80 2R 14598251 14598269 CAAAGCCAATCCCTTCGAC 59 14598113 14598207 AAGGAGCAATCCTTGAGCA 59 NA Drosophila melanogaster 61 CG30115 FBgn0050115 FBtr0300421 1 1 1 83 2R 14446958 14447036 ATCAAGGGATACCTGCAGG 58 14446893 14446913 CTCTTCAATGTTGGCGAAGAG 59 NA Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086701 1 1 2 66 2R 14424571 14424753 TTATCTCCGGCAATGTCTG 57 14424783 14424801 TACAGACCGCAATTGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 imd FBgn0013983 FBtr0086725 3 1 1 164 2R 14298385 14298403 ACAAGAGGAACCGGATGTG 59 14297822 14298260 AACAGCTGGTATATCACCTCTC 59 NA Drosophila melanogaster 61 Idgf5 FBgn0064237 FBtr0086668 2 1 1 158 2R 14281813 14281831 GTGGCTGGTTTAGTTCCTC 58 14281951 14282037 CATCAATAAAGAGTTCCGCTG 57 NA Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086796 3 1 5 132 2R 13738942 13738960 CCTTCCTCACAGAACCAGG 59 13742735 13742753 CAACTAACTGATACGGCGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 3 2 2 81 2R 13494101 13494122 GAAACCAGAGCTACTTGATCAC 59 13493971 13494061 ATAAACTTCGTTGAGCTGTGC 59 NA Drosophila melanogaster 61 CG15605 FBgn0034196 FBtr0087002 1 1 1 60 2R 13014419 13014438 AGTTGTAAAGAGGGACAAGG 57 13014378 13014396 CCTAAAGTATCGAGCCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34458 FBgn0085487 FBtr0112764 2 1 1 60 2R 12560010 12560030 GCAATGATTAGCGGATTTGGT 59 12560052 12560070 ATTTCAAACGGTTGGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7786 FBgn0034096 FBtr0087190 2 1 1 60 2R 12122074 12122093 GATGCCAAGTACTTTGAGCG 59 12122033 12122051 CATCTCTGGACCTCTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114474 1 1 3 88 2R 12084063 12084200 ACAGCAAACCAGAAGTTGG 58 12084252 12084270 TCTTCGGGATCAATTGGCT 59 NA Nonspecific Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 3 5 5 98 2R 11826474 11826550 TGAACGCTGATATTGGTGG 57 11826394 11826412 CCTGGTAGATCTGAGGACG 58 NA Drosophila melanogaster 61 CG30085 FBgn0050085 FBtr0087306 3 1 1 108 2R 11756316 11756422 GCATTATTGCAACATGATCGAC 59 11756229 11756249 GATATCTCCCAGCCAGAACTC 59 NA Drosophila melanogaster 61 tun FBgn0034046 FBtr0087287 2 1 1 80 2R 11740263 11740282 TTTCACAAGTACGTGACGGA 59 11740320 11740405 GGGTATGACTCTAAAGAATCTGTG 58 NA Drosophila melanogaster 61 CG30087 FBgn0050087 FBtr0100573 2 1 1 81 2R 11580148 11580167 CATTGTGGAGGATCGATCCT 59 11580276 11580354 CCAGTCGCAATCTTAGATTGG 59 NA Drosophila melanogaster 61 CG30470 FBgn0050470 FBtr0087326 2 1 1 60 2R 11348978 11348999 GTACTGCATTTGATTCCCACTC 59 11349018 11349038 ATACACAGAACACGGTAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 3 4 4 80 2R 11344302 11350806 GTTGATATCGAGGAAGAAACGTC 59 11350846 11350864 CTTGAGGAGCATCAGTGGT 59 NA Drosophila melanogaster 61 CG8093 FBgn0033999 FBtr0087401 3 1 1 93 2R 11102936 11103026 GTTCGGTGACAACTGTCAC 59 11102861 11102880 TGCATTGTGAGGATGTAACC 58 NA Drosophila melanogaster 61 CG42391 FBgn0259737 FBtr0300042 3 1 1 60 2R 11090179 11090197 TATGGAAGGCAAATCGTGG 57 11090220 11090239 TCTTGTGACGAGATTCCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp317a1 FBgn0033982 FBtr0087405 1 1 1 60 2R 10787358 10787377 ATCCTTTGTCGGGTGATCTG 59 10787400 10787418 TTCTGACGCATCTCCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpI1 FBgn0019938 FBtr0087511 3 1 1 80 2R 10487797 10487873 GATATTAAAGAACGCGTTGGC 58 10487737 10487756 ATAACGACGACATTCGTCTG 58 NA Drosophila melanogaster 61 LamC FBgn0010397 FBtr0087512 2 1 1 92 2R 10459029 10459047 ATCCACCCAACAATCTGGT 58 10458807 10458973 TGGCAACATCCTCTTTGTC 58 NA Drosophila melanogaster 61 Sin1 FBgn0033935 FBtr0087487 2 1 1 60 2R 10300204 10300224 TTACAATATCCCGACGTTCCT 59 10300244 10300264 CCTCTGTCATATACAAAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 2 4 4 84 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125980 10125998 TGTTGCTAAACCCGAAGTC 58 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0112795,FBtr0112796,FBtr0290035,FBtr0087528,FBtr0087527,FBtr0290034,FBtr0087529 2 8 8 98 2R 10063958 10063976 TGTCAAAGGCCTTACAGCT 59 10064034 10064125 GTGATAACTCTTTGTGTTCCAGG 59 NA Drosophila melanogaster 61 mRpS16 FBgn0033907 FBtr0087578 2 1 1 87 2R 10060805 10060888 ATTGTCGTCATGGAGAGGC 59 10060736 10060754 CGTTGTAATCGTTGGGCAG 59 NA Drosophila melanogaster 61 pea FBgn0086895 FBtr0087518 3 1 1 298 2R 10043921 10043995 CAATCAAGCGGAAGGTGAC 59 10044257 10044275 TGTAAACGACCTGGGAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13334 FBgn0033856 FBtr0087677 2 1 1 60 2R 9446557 9446578 CATTATCATCTCAAATCCCGCC 59 9446597 9446617 TAGATTGGTTATTCGCTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699,FBtr0087700 2 2 2 89 2R 9379392 9381771 CCCTGATATTAATCTGTTATAGCCC 58 9379327 9379346 GGTAGATGAACAAACCCAGC 59 NA Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 3 1 1 71 2R 9280196 9280216 AACTATTTATCGGAGGTTCGG 57 9280059 9280163 TTTCTTCCTCTCATGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13325 FBgn0033792 FBtr0087722 3 1 1 83 2R 9012421 9012497 CAATGATGATCACGGCTGC 59 9012543 9012562 CTATAAGCCAGGGTGTAGCA 59 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 1 2 2 93 2R 8825966 8826076 GGATCGGTTTCACAAAGCC 59 8826132 8826151 CATGGAATCACTGTCCTTGG 58 NA Drosophila melanogaster 61 bic FBgn0000181 FBtr0087782 3 1 2 221 2R 8757768 8757786 ACATTTGACTACGACTGGG 57 8758042 8758061 GAATTGTGTTTACCGACAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845,FBtr0087844 2 2 2 81 2R 8542531 8542551 CTGATGTAATGATCAGAGCGA 57 8542594 8542664 TCGAGCTCAGCCTTATACC 58 NA Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 3 2 2 119 2R 8531467 8531488 GCAGATAACAAGGGATTTACCC 59 8530877 8531387 CGTCAAGTTGGCTTTCGAG 59 NA Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0113358 1 1 2 186 2R 8383682 8383700 AATGTGAATCTGCTGCTCG 58 8385928 8387472 AAGTCTCGTAGCACTGCTC 59 NA Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0087938 1 1 2 81 2R 8386167 8386188 GCTATTTACTTCTCTTTGGTGG 57 8386230 8387473 GAAGTCTCGTAGCATCTCC 57 NA InUTR Drosophila melanogaster 61 CG13155 FBgn0033723 FBtr0087956 2 1 1 107 2R 8267379 8267397 TATACCCGCTACAATCGGA 57 8267228 8267308 GAATCTTGCCAGGATCCTG 58 NA Drosophila melanogaster 61 Drep-1 FBgn0024732 FBtr0087978 2 1 1 82 2R 7935682 7935984 GAACATTGGATCGATCCCAC 58 7936029 7936047 TTCAGCTCTCCGTTTCCAG 59 NA Drosophila melanogaster 61 S2P FBgn0033656 FBtr0088063 3 1 1 111 2R 7730975 7730993 TACATCACAACCCTTGTGC 58 7730815 7730903 GGCAGAAGATGAACTTTATTCC 57 NA Drosophila melanogaster 61 CG34229 FBgn0259832 FBtr0112422 3 1 1 171 2R 7729259 7729361 TTGAAGCAGTTTATGCTGCG 59 7729495 7729513 GAAGGAGCATCTTGATGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42493 FBgn0260007 FBtr0300507 2 1 1 80 2R 7666503 7666579 CTTAGAATAATTGCCCTCGGA 57 7666620 7666639 TGATTCCTCCTGAGACTCAG 58 NA Drosophila melanogaster 61 mms4 FBgn0033549 FBtr0088222 3 1 1 60 2R 6698632 6698653 GTCAAATAAAGTGGACAAGCTG 58 6698671 6698692 CTTAATACGCTTCTGTTGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 2 16 17 81 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193032 6193050 AAGTTGTATTTGGCACGGG 58 NA Drosophila melanogaster 61 CG12910 FBgn0033502 FBtr0088337 3 1 1 100 2R 6154676 6154694 GGACTACAGCAACAGTTGG 58 6154755 6155249 GGACATTACCTACGATATCCGT 59 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088363 3 2 4 147 2R 6138087 6138397 CATCATCGTTCTGGTGTCG 58 6137958 6137978 CGTACACAAACGTGTTAAACG 58 NA InUTR Drosophila melanogaster 61 CG12209 FBgn0033498 FBtr0088364 1 1 1 80 2R 6134529 6134603 CACCGTGCTTATAGTGGAG 57 6134467 6134486 CACATTATCAAGTCCTGCCA 58 NA Drosophila melanogaster 61 Dbp45A FBgn0010220 FBtr0088564 3 1 1 159 2R 4976935 4977019 CCAAATGGAAGCTTTGTATCGT 59 4977139 4977157 CTTCTCAAACCTCGCACTG 58 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 3 2 2 80 2R 4909359 4909481 AACATTGCTTTCAGGGACC 58 4909297 4909316 CTGCAGACTGTAGTCATTGC 59 NA Drosophila melanogaster 61 CG13744 FBgn0033363 FBtr0088666 3 1 1 106 2R 4902915 4902993 GTTCCCATCATAACCACACTG 59 4902829 4902847 ATGTGTCCATCGGAGTGTC 59 NA Drosophila melanogaster 61 ana2 FBgn0027513 FBtr0088685 2 1 1 92 2R 4786811 4786880 CCAATCAAGCAGGTAGACG 58 4786737 4786755 GAATCACTCGTGCTTGTGG 59 NA Drosophila melanogaster 61 CG8642 FBgn0033312 FBtr0088729 1 1 1 81 2R 4500587 4500605 CCTTCACGCACATGAACTG 59 4499550 4500543 CGTCCATTTAAATTGCTGCG 58 NA Nonspecific Drosophila melanogaster 61 CG30374 FBgn0050374 FBtr0088810 3 1 1 60 2R 4045255 4045276 TATACCTGGAGTCTACATTTGC 57 4045216 4045235 TGAAGAGGTAAGCAGATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sut2 FBgn0028562 FBtr0088778 2 1 1 82 2R 3975298 3975317 CATCTACCTGATTGGAGGCA 59 3975361 3975436 TAACCAGACATCCCTTACGG 58 NA Drosophila melanogaster 61 CG1707 FBgn0033162 FBtr0089013 3 1 1 98 2R 3281460 3282947 TGAGTTGACCCACAACTGG 59 3281380 3281399 ACCATGATTCCAATGTGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11107 FBgn0033160 FBtr0088966 1 1 1 80 2R 3275863 3275885 ACCAGAAAGAGATTACCTAGAGG 58 3275922 3276222 AGGATATCACCCTCAATTTCCT 58 NA Drosophila melanogaster 61 Tsp42En FBgn0033135 FBtr0089034 1 1 1 100 2R 2940650 2940668 TTGTCCAGATCTTCGTGGG 59 2940730 2940814 GATCACATAGCTCCAAACCAG 58 NA Drosophila melanogaster 61 ubl FBgn0022224 FBtr0086211 2 1 1 81 2R 2697755 2697775 ACAAAGCACGAGAAGATTGTC 59 2697629 2697717 CGTGAATTTCATAGTCAGATAGGC 59 NA Drosophila melanogaster 61 ZIP1 FBgn0033096 FBtr0086139 1 1 1 195 2R 2604076 2604171 AATTCTTTCTGACGAAGCGG 59 2603900 2603921 TGCGTTGGATAAGATTTCTGAG 58 NA InUTR Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0302826 2 1 2 93 2R 1937716 1937789 GTACAATCTGACAGCTGCA 57 1937641 1937659 GACTTCGAACTCAAGGGTC 57 NA InUTR Drosophila melanogaster 61 CG12551 FBgn0033045 FBtr0086048 2 1 1 81 2R 1808547 1808565 CCTATGTGACGACCTCGTC 59 1808610 1808628 GACTCATAGACGAATGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 2 3 3 153 2R 1036566 1036584 TCTGCTTCCTTATCACGCA 59 1040333 1040351 ATTCACGCTGACAAGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 His-Psi:CR33867 FBgn0053867 FBtr0091871 1 1 1 112 2L 21541021 21541042 CGAACATATCGTTCGTACTCTC 58 21539457 21540950 CTATTATACACGCACAGCACG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 snmRNA:158 FBgn0065104 FBtr0091750 3 1 1 60 2L 5206232 5206252 CAAGAAGGATCACTCTACCCA 59 5206273 5206292 TATCCCATCTAACCCTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttm3 FBgn0032971 FBtr0085935 2 1 1 60 2L 22080587 22080607 GGAACAGTTTAAGGACAACCA 58 22080626 22080647 ATTCTGAATGCTTTCCTGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33907 FBgn0053907 FBtr0091911 2 1 1 214 2L 21430042 21430060 CTTAATTGCCTTTGGGCCG 59 21429846 21429866 GCGTTTCCTCGTATATGAGTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 ppk13 FBgn0053508 FBtr0091448 2 1 1 80 2L 21088503 21088583 ATTAAAGCTTCGTTGAGTGC 57 21088442 21088460 ATTGGTATTCCAATCGCGA 57 NA Drosophila melanogaster 61 CG31676 FBgn0051676 FBtr0081424 3 1 1 94 2L 20845444 20845463 TACTGGAGCTACGTGAACTG 59 20845520 20848566 TTGCCGTAGACTTCTTGCA 59 NA Drosophila melanogaster 61 ns4 FBgn0032882 FBtr0081409 2 1 1 128 2L 20753102 20753187 ACTTTAAGGAATACGTGGACGA 59 20753276 20753294 GGATGTCCGAGAACTCCAG 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301718,FBtr0301719 3 3 4 80 2L 19910366 19910385 CACCTGGAAAGCACTTTCTC 59 19910428 19925396 GACTGTTGCGAATACGCTC 59 NA Drosophila melanogaster 61 CG10466 FBgn0032822 FBtr0081291 3 1 1 174 2L 19792441 19792517 GAAAGTCCAAGGGCTTCTG 58 19792655 19792673 TAAAGGCGAAGGGTTTCCT 59 NA Drosophila melanogaster 61 CG13086 FBgn0032770 FBtr0081197 1 1 1 87 2L 19364541 19364559 TACTTCGTTGCTGACGAGG 59 19365015 19365034 TATCCAGGCAAACTCGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232,FBtr0081230,FBtr0081229 1 3 4 88 2L 19183325 19183396 AAATCATCATGTGCTGCGG 59 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 1 2 2 122 2L 18134815 18135581 CATTTCAACGAGGTGATCCA 58 18134712 18134730 GATGACGCACTCGTATACG 58 NA Drosophila melanogaster 61 CG6412 FBgn0032646 FBtr0080994 2 1 1 115 2L 17500120 17500138 ATTTCGTAGCCAGGAACGA 59 17499918 17500041 ATCAAAGCCAAGCTTCCAC 58 NA Drosophila melanogaster 61 CG4841 FBgn0032622 FBtr0080950 2 1 1 80 2L 16915341 16915425 ACAGTGAGATTGATGCTGTG 58 16915465 16915486 GTGTTCGCTCTATAGAATTGGA 58 NA Drosophila melanogaster 61 CG42231 FBgn0087041 FBtr0273183 1 1 1 80 2L 16342745 16342833 GATCTGGTTCGGTTCACCA 59 16342683 16342704 CCCACTCCTTCTGATAGTACTG 59 NA Nonspecific Drosophila melanogaster 61 Cyp303a1 FBgn0001992 FBtr0080828 1 1 1 60 2L 16295052 16295072 ATTCATAGCTCCCAACTTCTC 57 16295091 16295112 ATACAAAGATCTGTGACTCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4793 FBgn0028514 FBtr0300612 1 1 1 74 2L 15923572 15923591 AATCAGGGATGTGAATCTGG 57 15923689 15923707 ATTGTCAGCCTGTACTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 1 2 2 80 2L 15906995 15908081 GAAATCGATGTCGAGACTGC 59 15906934 15906955 AAATTTGCCCGATATTGAGGTG 59 NA Drosophila melanogaster 61 CG3793 FBgn0028507 FBtr0080761 2 1 1 132 2L 15765088 15765106 CCTGCCCACCATATTTCTC 58 15765201 15765284 GTTCATGTTGACCTGTTCGT 58 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 3 5 5 85 2L 15759355 15759429 GTATTCGCCGAAGACTGGT 59 15759288 15759306 AGGCTCCACGAATGAACTC 59 NA Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080772,FBtr0080771 2 2 2 230 2L 15750842 15750860 CAAACAGTGGCTGAAGGAC 59 15750560 15750579 TACTTGAAGTAGTAGGCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15263 FBgn0028853 FBtr0080729 1 1 1 60 2L 15285662 15285683 ACCATTTGGATACTACAACGAG 58 15285704 15285722 TTCAAAGGCCTCCCTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 3 5 5 80 2L 14189225 14195743 GAGCTAATGAGCTTGAACCT 57 14189164 14189182 GAAGCGTCGTATGAGACTC 57 NA Drosophila melanogaster 61 nimC3 FBgn0001967 FBtr0290243 2 1 1 61 2L 14020098 14020116 GATCCACTTGGTGGAGGTC 59 14020055 14020075 TGATGTTCTTCTGGCAATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 3 2 2 81 2L 13908723 13908741 CAATGTGGAGTTGCCTCTG 58 13908786 13908871 CATGGACAGCATGTTGTGG 59 NA Drosophila melanogaster 61 CG9267 FBgn0032524 FBtr0080519 1 1 1 80 2L 13444678 13444696 CATGTATGCCAAACCCGTC 59 13444550 13444636 GCCAAGTAGTATGGATATCGC 58 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220,FBtr0080497 3 3 3 76 2L 13382775 13382901 CCGCGATTCAAACATACAC 57 13382941 13382959 TGGAAATTCTCCTGGTCCA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 1 3 3 246 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 ACXB FBgn0040509 FBtr0080414 1 1 1 88 2L 12920286 12920376 ATCCGAATTGGAACAGGTG 57 12920425 12920446 CAAACGTGGTCATTATAAAGGC 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 3 1 8 117 2L 12458207 12460590 AAGATCTGGTCAAGTCGCA 59 12458108 12458126 AGAATGCTGTTCTCGAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899,FBtr0089898 1 2 2 199 2L 12432481 12432499 GATCATACTCCCGTTCCCG 59 12432196 12432319 GAGTCATATCTCGCACTCCC 59 NA InUTR Drosophila melanogaster 61 CG6579 FBgn0032422 FBtr0273342 2 1 1 215 2L 12177671 12177690 TTTCAGTTGTTCAGCGTCTG 59 12176906 12176924 AATCGATCTTGTCCTTGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17211 FBgn0032414 FBtr0080336 3 1 1 80 2L 12125891 12125970 CTGCTATTGCATAGGTGGC 59 12126014 12126032 ACAAAGATGGGCTTACAGC 58 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 5 6 100 2L 11835158 11835176 GAATATGTCGTTCACCGCC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 CG14071 FBgn0032312 FBtr0080178 1 1 1 60 2L 10888648 10888669 CTGATTTGGATCACGAATTGAG 57 10888609 10888630 AAATTATCCTCGGTATCGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17108 FBgn0032285 FBtr0080127 1 1 1 64 2L 10693483 10693501 GATTTGGTGGAGGAATCGG 58 10693437 10693456 TCCACCAATAACTCCAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 1 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 cdc2 FBgn0004106 FBtr0080051 2 1 1 115 2L 10386116 10386134 ATGGCGTGGTGTATAAGGG 59 10385634 10386038 CGAAATTTCTCTGATCGCGG 59 NA Drosophila melanogaster 61 Hand FBgn0032209 FBtr0080073 3 1 1 82 2L 10295048 10295216 CATGAAACACTCCGAAAGTC 57 10294985 10295003 TCCGAGTATTCGAAGTTGG 57 NA Drosophila melanogaster 61 Pros35 FBgn0250843 FBtr0079948 3 1 1 88 2L 10222065 10222083 TGAAATCATCCGTCACGGA 59 10222134 10222211 CAGTGATGTCATACTGACCG 58 NA Drosophila melanogaster 61 Sur FBgn0028675 FBtr0290268 3 1 1 80 2L 10194980 10195224 TGGACAATCCAAGTGAACCA 59 10194919 10194937 TGATGTTCCGAGTGTCCTC 59 NA Drosophila melanogaster 61 Sur FBgn0028675 FBtr0290268 2 1 1 80 2L 10194980 10195223 GGACAATCCAAGTGAACCA 57 10194918 10194936 ATGATGTTCCGAGTGTCCT 58 NA Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 2 1 1 61 2L 10050587 10050605 TTCACTTCCCACACTTCAG 57 10050630 10050707 AAAGACTCATGAAACGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 1 1 1 60 2L 10050588 10050606 TCACTTCCCACACTTCAGG 59 10050630 10050707 AAAGACTCATGAAACGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 3 2 2 81 2L 9611430 9611448 AGCAAGGTTCTTAAGCGTC 58 9611493 9611570 TGCCACAGGCATTATACTG 57 NA Drosophila melanogaster 61 CG31883 FBgn0032122 FBtr0079829 1 1 1 60 2L 9528567 9528585 TCCGACTACCTTAGGACTC 57 9528608 9528627 TCTTAACAGTAGGGTCCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fbp2 FBgn0000640 FBtr0079808 3 1 1 93 2L 9427174 9427195 AATGATGGGACACATTGATGTG 59 9427248 9427327 CATGCCAGTCAGATTCATGC 59 NA Drosophila melanogaster 61 aust FBgn0032104 FBtr0079819 3 1 1 142 2L 9250677 9250761 AGAGGGCAGCTATTAAGCC 59 9250553 9250571 CACAAAGCTCATGGTGTCG 59 NA Drosophila melanogaster 61 CG9465 FBgn0032067 FBtr0079743 1 1 1 93 2L 8770473 8770492 AGAGGTCAAACATTCATCGA 57 8770336 8770420 CATCACTAGTTTAACAACCGAG 57 NA Drosophila melanogaster 61 CG9314 FBgn0032061 FBtr0079731 3 1 1 124 2L 8706524 8706606 TGTACATTCAGGTGATGCTC 57 8706692 8706711 GCGATCTAGAACAATCTTGC 57 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 1 4 4 95 2L 8536986 8537004 AATAATTCGCTGACGGTGC 59 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 CG8451 FBgn0031998 FBtr0079637 3 1 1 81 2L 8202397 8202475 TGGATGAGATTCTGTTTCTGC 58 8202278 8202297 ACATGGAGATTAATGCCCGA 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300185,FBtr0300184,FBtr0079531 2 3 3 133 2L 7985761 7985844 CGAAACCAGTGGCATTGAC 59 7985940 7985959 GGTTGAGAAATTCCGACAGC 59 NA Drosophila melanogaster 61 Uro FBgn0003961 FBtr0079486 1 1 1 80 2L 7780674 7780765 TGGTTATAAGGAGAACAGATCCC 60 7780805 7780823 AGGATTGGGTCGTCTTCAG 59 NA Drosophila melanogaster 61 CG18585 FBgn0031929 FBtr0079516 3 1 1 81 2L 7690222 7690241 GGCCGATAACTATGATTGGC 59 7690096 7690180 CCACATACGATCCTTCTTGTG 58 NA Drosophila melanogaster 61 CG13792 FBgn0031927 FBtr0079520 1 1 1 120 2L 7644765 7644932 AAATATCGGGTGAGCTCCT 58 7644663 7644681 CATTATCGATCCGACGCTC 58 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 2 3 3 85 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227333 7228704 CGTTTAATGGGAACCTGGC 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079430 1 1 2 145 2L 7027016 7027208 GTGTGGCTATCAAAGCAGG 58 7026889 7026909 TGATACATGATTCCTTCGCAC 58 NA InUTR Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 2 3 3 80 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713839 6714565 AACAGTATGCTGTACACGGT 59 NA Drosophila melanogaster 61 CG34345 FBgn0085374 FBtr0112553 2 1 1 80 2L 6624929 6624949 TAATGGTGACCCAAATCTGCT 60 6624991 6625065 ATGCTCTTGACTAGCACCC 60 NA Drosophila melanogaster 61 CG13982 FBgn0031811 FBtr0079256 1 1 1 64 2L 6412808 6412826 GTCTTCACTGACAACTCCC 57 6412854 6413194 ATCTGTTCTTTCGCCAGAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13991 FBgn0031785 FBtr0079202 2 1 1 60 2L 6143893 6143911 AGCCTCAAGAACAAGACCT 59 6143932 6143953 TGTGAATGGACAATGTGAAGTG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 3 2 2 84 2L 6072602 6072620 CATAGATTCCGCGCTATGG 58 6072666 6072743 CTGTTGTGAGGTAAAGATGGG 58 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 2 3 3 184 2L 6049171 6049190 CAACTACTGCTTCGAGATCG 58 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079173 2 1 2 112 2L 5970469 5970488 GCCCTGACTTCCATTTACAG 58 5970632 5970650 AAGTCATAGCAGCTGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11029 FBgn0031735 FBtr0079136 3 1 1 60 2L 5746666 5746687 TGATATTGACATCATAGCTGCC 59 5746708 5746726 GGAAAGTATTCCGTTGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 1 3 3 80 2L 5533672 5533691 CTGATGACTCAACCAAGAGC 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 CG14033 FBgn0046776 FBtr0079065 1 1 1 60 2L 5243812 5243832 CCATCGTTTACTTCAAAGGAC 57 5243854 5243872 GTGATGTGGAAGATCCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpn11 FBgn0028694 FBtr0079027 3 1 1 100 2L 5058666 5058793 ACAACAAGTCACTGGAGGA 58 5058584 5058602 CACCTTCTCCTCCAAATGC 58 NA Nonspecific Drosophila melanogaster 61 CG11929 FBgn0031620 FBtr0077377 1 1 1 117 2L 4682884 4682904 AAACACCAATATGTACGCCTG 59 4683038 4684523 CCATGGAAGCATCAGTGGA 59 NA Drosophila melanogaster 61 mRpL27 FBgn0053002 FBtr0077451 3 1 1 176 2L 4459369 4459387 GGAATAAGAAGGGCCATGC 58 4459153 4459171 CATAAACCTTGCCGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3338 FBgn0031598 FBtr0077462 2 1 1 116 2L 4385817 4385896 AGGTCATCGACAAGGTTCTC 59 4385720 4385738 TCTCATCAATACCGGCCAG 59 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077484,FBtr0077485 1 2 2 110 2L 4187745 4187766 GGCAACATTTGTTATTGTGAGC 59 4187445 4187463 GAGGATTTGATCCTTGCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290079,FBtr0290082 2 9 9 81 2L 3874501 3874520 CTCCAAGACGACAATCTCAC 58 3874385 3874457 CTTGCGCATGGTATTTGTG 58 NA Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 3 1 1 96 2L 3693801 3693820 CAAGCAATTCTTTGGCTCTG 58 3693655 3693673 GCATCATAAGACCAGCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Sfp23F FBgn0259949 FBtr0300295 1 1 1 179 2L 3387652 3387670 ATTTGGCTGTGTTTCAGCT 58 3387423 3387442 TCGCATTCCTTAATGCTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3326 FBgn0031519 FBtr0077603 3 1 1 96 2L 3318317 3318465 CAACCGGCTATAATATTCATAGACG 59 3318245 3318263 GAAACTCGTTCTTCAGGCG 59 NA Drosophila melanogaster 61 CG3117 FBgn0031471 FBtr0300356 2 1 1 88 2L 2847067 2847085 AAGAGATGCCGTTCTTCGA 59 2846927 2847018 ACTCATGCCTATCACATTTGAC 58 NA Drosophila melanogaster 61 Duox FBgn0031464 FBtr0300382 1 1 1 80 2L 2816757 2816780 CTGGAGATACACATATTCATCACG 59 2816644 2816720 GTGGTTCTCACAGATGTACAG 58 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 3 3 4 148 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740641 2740660 TTCTCCTTGGTGAACACCTC 59 NA Drosophila melanogaster 61 p16-ARC FBgn0031437 FBtr0077694 1 1 1 106 2L 2580570 2580650 CAGAATGTGAAGGACCACG 58 2580720 2580738 ATTAGGTCGTTCTGGTCCA 58 NA Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 3 2 2 116 2L 2309692 2310136 GATTTCCTCAACGATTACAGCA 59 2309597 2309615 ATTATCATCCCGCCGATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ser12 FBgn0011832 FBtr0077806 1 1 1 60 2L 2250920 2250940 ATAGCCGTAATTAGACTGGTG 57 2250880 2250900 GTTGGATAGGTCTTACTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830,FBtr0077831 3 2 2 85 2L 2153461 2153481 TATACGCCCAATCCTAACGAG 59 2153526 2153610 GGCTCAAAGAACAAGCTTCTC 59 NA Drosophila melanogaster 61 CG4259 FBgn0031389 FBtr0077854 3 1 1 100 2L 2129061 2129143 ACTACAATCAGATACGACGTG 57 2128981 2128999 ATAGCGAAACAGCCAATCC 58 NA Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0077866 1 1 2 80 2L 1991819 1991838 ATCAAGGACGCTGATAAGTG 57 1991620 1991778 TGCACTATCACGTTTCATCTC 58 NA Drosophila melanogaster 61 CG33673 FBgn0053673 FBtr0091652 3 1 1 92 2L 1946492 1947305 CGAGTCGACATCAACTTACTC 58 1946420 1946439 GTACCAGTGCTTCAGTAGGA 58 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0302115 3 1 6 216 2L 1727656 1727674 AAATTTGTGCAGATCCGCA 58 1727371 1727390 GAAGTATCTCCCTACAGCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5118 FBgn0031317 FBtr0077979 3 1 1 97 2L 1171782 1171801 TTATAAGCGGAAACACCGAG 58 1171634 1171722 GTGAATGGGTAGCAATCCT 57 NA Drosophila melanogaster 61 unc-4 FBgn0024184 FBtr0074460 2 1 1 213 X 17663630 17663648 GGATCTAATGAGGATGGCG 57 17670306 17670464 GATTCTGGAACCATACCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11674 FBgn0030551 FBtr0073926 1 1 1 130 X 14119460 14119478 GTGAGTTTCAGCAACAGTG 57 14119287 14119367 CTCTAGACAGCTTGATTGCA 57 NA Drosophila melanogaster 61 CG10803 FBgn0029666 FBtr0070569 1 1 1 101 X 3381472 3381493 GCATAGCGTCTACGAAATATCC 59 3381552 3381639 GAAAGGTATTTGCCCAGATAGG 59 NA Drosophila melanogaster 61 HLH3B FBgn0011276 FBtr0070506 3 1 1 75 X 2574940 2574959 GTACATTAAGCTGCTGACGG 59 2574884 2574902 CATTTGAGCCCTGATCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 O-fut2 FBgn0027791 FBtr0070296 2 1 1 60 X 1359768 1359787 TACGACGTAAACATCTCCGA 58 1359727 1359745 CCGCCATGCGAATATAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14506 FBgn0039659 FBtr0085439 1 1 1 119 3R 25122787 25122805 ACCAGCTAGTGTCTATGGG 58 25122604 25122622 ATGAACATCAGGCGATCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056,FBtr0290057 1 4 4 80 3R 19440146 19440165 CCAACCACTTCTACTTCACG 58 19437845 19440103 GGAATCCCAGGATCCTGTC 59 NA Drosophila melanogaster 61 mus309 FBgn0002906 FBtr0082434 3 1 1 80 3R 7564975 7564994 TGACCATTGTTATCAGTCCG 57 7564851 7564935 TCTTTGCACAGATATCTAGGGA 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0300911,FBtr0078674,FBtr0300906,FBtr0078675,FBtr0300910,FBtr0300907,FBtr0078672 3 8 12 165 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1586609 1586628 GTTTAGGGATCGGTGAAGAC 58 NA Drosophila melanogaster 61 Sfp79B FBgn0259973 FBtr0300318 1 1 1 89 3L 22073428 22073447 TCTCGTTCAGAATGAAGCTC 57 22073496 22073517 CATTCGTGTTCGTATTCTTCTG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 mRpL50 FBgn0028648 FBtr0076891 2 1 1 184 3L 7236895 7236969 AACCCTAATTCTTGCGGGA 59 7236670 7236689 CTACGGTTCGAATACGTTCG 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 3 10 10 114 3L 5543936 5543955 TTACTGGCGTTTCTTGTGTC 58 5538159 5538177 ACTTAGCAGAGTAGACGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 1 10 13 127 2R 18814859 18814878 CTACTACGAGGTGAAGGTGG 59 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 CG42288 FBgn0259184 FBtr0299668 1 1 1 203 2R 9978870 9978961 GAGTGCACAATAACAACGAG 57 9979191 9979209 CATCTTCGTAGGCGAAGAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG9080 FBgn0033593 FBtr0088191 2 1 1 69 2R 7129534 7129552 TGATGGCACTGGAGTTAGG 59 7129483 7129501 TCCACAGCAATATCCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 2 5 5 106 2R 6624407 6624428 AAACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 1 2 2 103 2R 3336439 3336510 TAAGAAACGCTACGAACAGC 58 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089009,FBtr0089010,FBtr0089012 2 8 8 138 2R 3287483 3287504 GCCTCATACAGTTTATAAGGGA 57 3287308 3287384 GGTGACTTCATTCCTGGTC 57 NA Drosophila melanogaster 61 Sfp38D FBgn0261058 FBtr0301938 3 1 1 104 2L 20640973 20641058 ATTGGCTACATACTTGGCAC 58 20641125 20641143 GGGATTGCTAAGAGCTTGC 59 NA Drosophila melanogaster 61 Prx6005 FBgn0031479 FBtr0077684 2 1 1 150 2L 2877378 2877620 GCAACTTTGATGAAATCCTTCG 58 2877249 2877269 CCATCAGGAAAGAGCTTAGGA 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 2 4 4 80 2L 872014 872035 AATCGCCTCAAGATAAACTCAG 58 872075 872221 TAGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050,FBtr0078049 2 5 5 80 2L 345086 345105 GGAGAACGGATGAACTTCAG 58 345147 345227 GAATTTGACGAGCCTTGGAG 59 NA Drosophila melanogaster 61 CG31976 FBgn0051976 FBtr0302194 1 1 1 80 2L 139299 139317 CGATTCTCAGCATCTCGAC 58 139180 139258 AGGTCACATAATAACAGCTCTC 57 NA Nonspecific Drosophila melanogaster 61 spd-2 FBgn0027500 FBtr0075363 2 1 1 141 3L 16587091 16587171 GTGTCCAATTCTGTCTTGGC 59 16586969 16586988 TTTCTGGTTCCAATAGCGGT 59 NA Drosophila melanogaster 61 HSPC300 FBgn0061198 FBtr0072194 3 1 1 82 2R 19916188 19916206 GCGAACAGGGAGTATATCG 57 19915635 19916144 CGACAGGACATATCGAAAGAG 58 NA Drosophila melanogaster 61 CG14688 FBgn0037819 FBtr0113215 2 1 1 86 3R 6504121 6504139 ACTGATGGTCTACGATCGG 58 6503778 6504071 ATTAGAATGCAGGTGCCCT 59 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0112809,FBtr0087465,FBtr0112810 2 4 4 81 2R 10673389 10673409 CTGTGATAAGAAGAGCTGTGG 58 10663821 10673349 GAAGAATTTCAGGAAGAAGCGA 59 NA Drosophila melanogaster 61 CG4887 FBgn0031318 FBtr0077966 3 1 1 80 2L 1174507 1174525 CGGTATAGCGTTTGTCGAG 58 1174568 1174926 TTTAACTTCAGAACGCCCTG 58 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 3 4 4 80 2R 7531789 7531809 ATTAATTTGCACTCGTGCTCC 59 7531670 7531750 GATCTCCATGAGATTTGGACAG 58 NA Drosophila melanogaster 61 CG34356 FBgn0085385 FBtr0112566 1 1 1 80 3L 9942166 9942184 TTCAATAACGGAAGGCCAC 58 9942228 9942703 CAGATCATCCAGCGTTTCC 58 NA Drosophila melanogaster 61 CG9254 FBgn0028513 FBtr0080512 1 1 1 60 2L 13596868 13596887 ATACACCATGCGGATATGTC 57 13596827 13596847 ATAATTCCTCTTCACCACCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 t FBgn0086367 FBtr0071335 1 1 1 80 X 9115492 9115513 CTTTCTGATCTTATCGAAGCCC 59 9115331 9115451 TCGTTGTAGATCTGCCTGC 59 NA Drosophila melanogaster 61 Cby FBgn0067317 FBtr0290217 3 1 1 84 3R 17693873 17694044 CCTTCAAGCAGTTGTTTGC 58 17694092 17694110 ATATTGCAACGTCCCTGAC 57 NA InUTR Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 3 1 1 271 3R 17206665 17207111 AAAGGATAACAGCCAGGTG 57 17207346 17207364 ATTTGTAGCGCCGATTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4683 FBgn0037857 FBtr0082326 2 1 1 80 3R 6776472 6776493 ACAAGATCCTGGTAGTGTATCC 59 6776531 6776606 ATCTTCGATATTGCGTTATGCG 59 NA Drosophila melanogaster 61 CG14448 FBgn0037191 FBtr0078534 2 1 1 60 3L 22782082 22782102 TTACCTCTTTCGGTTCAAGTG 58 22782124 22782142 GGTGGTCTGCATGTTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 1 2 2 80 3L 3202191 3209298 TGAGGAATAGTGTATTCCTCACC 59 3209335 3209356 CACCCACGTCTATTTGAATCTG 59 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153,FBtr0072155,FBtr0072154 3 3 3 60 2R 19859013 19859034 AAGCCGATAAAGATTAAGCTGG 59 19859052 19859073 GAGATACGATCTGGTACTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 3 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 CG11306 FBgn0037108 FBtr0078422 1 1 1 80 3L 21620493 21620575 TCTCAAGAATGTACAAGTGGGT 59 21620614 21620634 GCAGAATATGATTCTCGGTCC 58 NA Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 3 1 1 218 X 373092 373154 GAGACCCTCTTCATCTTTCG 57 372893 372914 CGAATTGTACTCTTCTTACAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 2 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077236 3 1 3 85 X 21080897 21082116 AATCCGTCAGGATCGAGTC 59 21080830 21080848 GTGTAGGTGTTAAGCGTGG 58 NA Drosophila melanogaster 61 CG11235 FBgn0031135 FBtr0077281 3 1 1 272 X 20743399 20743417 GTTTCTCCAACGTTCCCTC 58 20746180 20746198 ATTCTCAAAGTCGTCCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 cactin FBgn0031114 FBtr0077305 1 1 1 60 X 20295708 20295726 CTCCAATCTCACCTCCACC 59 20295747 20295768 ATTTGATAGTCCCTCTACCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1631 FBgn0031101 FBtr0077297 2 1 1 80 X 20198728 20198809 ATACTAGCGATAGCGAAGATGAG 59 20198849 20198867 ACAGCAGACTGTACATGCT 59 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 2 4 4 80 X 19465725 19465818 CTAGGTTTCAGCACTTTATCTCTG 59 19465668 19465688 CATTGAACCAGACAGACTTCC 59 NA Drosophila melanogaster 61 CG34330 FBgn0085359 FBtr0112532 1 1 1 73 X 18962653 18962672 CCAAGTGAAACAGGAGTGAG 58 18962599 18962617 TAATCGACACAGCCAGTCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074568 3 1 2 109 X 18330828 18334234 CAGGAGCAGTTGCAAACTC 59 18330737 18330755 ACCTTCAGCTTACCATCGG 59 NA Nonspecific Drosophila melanogaster 61 Ucp4A FBgn0030872 FBtr0074464 1 1 1 129 X 17739671 17739689 TTACATCGTTTCCGTGGTG 58 17739779 17740724 GTATTGCATATTGGACTTTCCC 57 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 1 2 2 146 X 16828340 16828359 CTATTTGACGCAGGTTGGAC 59 16828468 16828910 CTGGAGAGGACCAAACTGG 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 2 5 5 83 X 16178783 16179061 CGACTACGTAGGCTATGCA 59 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 2 2 2 110 X 15411715 15413956 CGATACAGGTTCACCCTCTC 59 15411624 15411643 AAAGGAGCTAGAGATTGGGC 59 NA Drosophila melanogaster 61 Ahcy13 FBgn0014455 FBtr0074030 2 1 1 170 X 15344734 15344755 GATCATTATTGCGGAGAACGAG 59 15344886 15345441 CTGGACCATTGGACCTGAG 59 NA Drosophila melanogaster 61 CG11071 FBgn0030532 FBtr0073829 3 1 1 69 X 13751052 13751070 TCCAGAATTCTCAGCCTGC 59 13750779 13751019 GTAGTCCACGTGTCCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11092 FBgn0027537 FBtr0073828 3 1 1 80 X 13718183 13718201 AGGGTCAGCTAAAGTTGGA 58 13718245 13718336 ACAATACGACGTATACCGC 57 NA Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 2 2 2 81 X 11980916 11980934 ACACCTATCAAGTTTGGCG 58 11980785 11980872 TTATGCAACGACTTATCGGG 58 NA Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 2 2 2 129 X 11885108 11885126 AATCGATCGACACAAGGAC 57 11884926 11885015 GATCTTGTCGCCAGATGAG 58 NA Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 2 2 2 134 X 11747533 11747551 AAAGATGACGTAGCGGAGG 59 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0073513 3 1 2 93 X 11471844 11471923 TACTTTAGGTGCAAGATCTGCT 59 11471977 11471995 TTAGGTCGTCCTTGTTGGG 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 3 4 4 164 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444962 11445074 AGCTTCAATCCATCTTCTATGC 58 NA Drosophila melanogaster 61 Rab9E FBgn0052673 FBtr0071505 1 1 1 60 X 10555693 10555714 TTTCTCGGATAACCAATTCACC 58 10555654 10555672 CTCCCTTCTATCCATGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633,FBtr0300516,FBtr0300513,FBtr0300514,FBtr0300512,FBtr0299632,FBtr0300511,FBtr0300515 1 8 8 80 X 10172172 10172191 GCATTACGAATACCTGCCAC 59 10172042 10172131 CAGCTTCGCTGAATCTAAAGG 59 NA Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 2 1 1 63 X 9103493 9103511 GAAGAAGAGCTTCACCTGC 58 9101087 9103466 GATGAAGGCACCTTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071263 2 1 2 183 X 8867403 8867695 AGACCACGAGCATCAATCC 59 8867238 8867256 CAGAAATATTCGCCCACCG 59 NA DesignRelaxed Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 3 6 6 116 X 7944307 7944478 CCAAGAAAGATGAGTCCGC 58 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG3184 FBgn0029892 FBtr0070989 3 1 1 60 X 6582486 6582504 GAGCAGTGAGTGTAATCCC 57 6582444 6582462 GTACAATTCCATCTGGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2938 FBgn0029685 FBtr0070627 3 1 1 93 X 3829203 3829301 CTCCCTCACTGACACAAGG 59 3829128 3829146 CAGCCGTATACTCTCGTCG 59 NA Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 1 2 2 120 X 1362209 1362292 CATCGTTAAGGCCATCACG 59 1362376 1362394 CTCCTTCGTCTCTTCCACG 59 NA Drosophila melanogaster 61 Su(Ste):CR42439 FBgn0259870 FBtr0300167 1 1 1 60 U 9487024 9487047 CACCTACTAATACACCTCATACAC 58 9486987 9487006 TGGACCTAACACTTTGTACC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 3 1 1 70 U 2759848 2759866 TCGACACTGTCCTATGGAC 58 2759742 2759817 AAAGTTCTGTATCCGTACTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG40245 FBgn0058245 FBtr0302520 1 1 1 60 U 688308 688329 CTTGAGAAACTTTACTCGTCGT 58 688269 688288 ATTCATCGATGCCAACATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4c3 FBgn0015032 FBtr0085712 2 1 1 86 3R 26725498 26725580 CTTTCTAATGAGGACATTCGCG 59 26725627 26725645 TAGTGTCCAGGAAATGGCC 59 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 3 2 2 80 3R 26709831 26709910 AGTACTACAAGATCTGCTCTGAG 59 26709773 26709794 GATCAATATAGGGTCGTTTGGC 59 NA Drosophila melanogaster 61 mRpS18C FBgn0039765 FBtr0085625 3 1 1 60 3R 26249913 26249933 CGATCGACATAAAGAATCCCT 57 26249955 26249973 CTGTGCTTGCATAGGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11899 FBgn0014427 FBtr0085390 2 1 1 102 3R 25026280 25026384 CCGAAGAGGTACTGAAAGAG 57 25026449 25026467 ATCTTGGCATAGTTGCTGG 57 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 3 3 3 87 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975352 24975370 CTTGAAGTTCTCGTCCAGC 58 NA Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085357 2 1 2 181 3R 24860520 24860597 AAGGAACTGAAGAGGCAGG 59 24860741 24860760 AAGTGCGACATGTAAAGGTC 58 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 2 2 2 62 3R 22939932 22940012 AAGACGCATTTACGACGAC 58 22940035 22940056 TCTATGAAGTCATCCAGCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 TwdlS FBgn0039443 FBtr0085034 1 1 1 91 3R 22462478 22462560 CTCTCCTTGTTGTTACTATGGAC 58 22462611 22462629 CCTCCAGATGACACTTCGT 59 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641,FBtr0084953,FBtr0084952 3 3 3 80 3R 21810778 21810857 TCTCTGCTAAGGTTGGCTC 59 21810898 21810919 TCTCGGTTGGTTTACTATTCGA 59 NA Drosophila melanogaster 61 CG5079 FBgn0039346 FBtr0084883 2 1 1 60 3R 21439893 21439911 AGTGCAACCGAATAGGGAG 59 21439935 21439953 TGCTGTCTGAAGTTTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Orct2 FBgn0086365 FBtr0084598 3 1 1 60 3R 20099486 20099504 ACCTCAATAGTGCGGTGAC 59 20099528 20099546 GTAGCTGCCATGAAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056,FBtr0290057 3 4 4 83 3R 19434146 19434165 GTACGACCTTATGGACATGG 57 19433379 19434101 CCGTAGACCTTGAATGTCTC 57 NA Drosophila melanogaster 61 CG13827 FBgn0039068 FBtr0084376 1 1 1 88 3R 19084261 19085410 GAGATAAGGTGATGAAGGCA 57 19085461 19085479 GTATCGCTTGGCTAGTTCC 58 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 3 5 5 80 3R 18430299 18430377 CAGCAGCTTTAAGAAGACTCC 59 18430417 18430437 AAATACAGCACAAGATCACGC 59 NA Drosophila melanogaster 61 mRpL35 FBgn0038923 FBtr0084171 2 1 1 60 3R 17849869 17849887 ATAAGCCCTATCACAGCCG 59 17849907 17849929 CACACCTTAAAGGTCTTTGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Takl1 FBgn0046689 FBtr0083996 3 1 1 120 3R 16597971 16597989 GATGGAGTACCTGGAGGAG 58 16597816 16597888 CAAGTATGCTAAGGCCTTGG 58 NA Drosophila melanogaster 61 Ir92a FBgn0038789 FBtr0113253 2 1 1 80 3R 16165158 16165177 AAGCGGTATTTGTTCCTGTG 58 16165220 16165872 ATGGTGAGGGTAGAACTGC 59 NA Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 1 2 2 80 3R 15869772 15869849 TATACACGGAGCGATTTCCC 59 15869891 15869910 TCACCATCAAGGGTATCGAG 59 NA Nonspecific Drosophila melanogaster 61 CG31244 FBgn0051244 FBtr0083772 2 1 1 60 3R 15223758 15223777 GAATTCTGAAGGAGTGCGAG 58 15223717 15223739 TCCATGGGTATACTATAGGTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6045 FBgn0038349 FBtr0083151 1 1 1 80 3R 11369382 11369459 TGGGACAGGGTATGAACAC 59 11369320 11369339 ACTCCACCTTGATGAAGCTC 59 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083054,FBtr0083053,FBtr0301846,FBtr0113237 1 4 4 103 3R 11055702 11055720 GTTTGCTACTACTGCTGCC 58 11055856 11055874 TATGCACCGACTTCAGGAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG3837 FBgn0038279 FBtr0083004 3 1 1 80 3R 10745144 10745241 CCCTTAAACACAACAGACCG 59 10745284 10745302 AGGAGTTCCGGATGAACTC 58 NA Drosophila melanogaster 61 mRpL11 FBgn0038234 FBtr0082953 3 1 1 80 3R 10338114 10338193 CTTACCATGCAGCAAATGTG 58 10338235 10338254 CGGATCTATTTCCCTGACCA 59 NA Nonspecific Drosophila melanogaster 61 CG31320 FBgn0051320 FBtr0082943 3 1 1 60 3R 10184971 10184990 AATGTAGAACGTGAGTCCAG 57 10184930 10184950 GTTCCACAATCTGAGATACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 poly FBgn0086371 FBtr0082772 1 1 1 144 3R 9192597 9192615 TACGGTCATACTAGCACCT 57 9188569 9192489 ATTGTTTCGATCCGTTGGT 57 NA InUTR Drosophila melanogaster 61 CG8630 FBgn0038130 FBtr0082737 2 1 1 109 3R 9109262 9109280 AACTACCACCACGTCTTCC 59 9109352 9109428 TAGGCTTGTCCGATCTTAGC 59 NA Drosophila melanogaster 61 beat-Vb FBgn0038092 FBtr0082684 2 1 1 83 3R 8759125 8759146 GTAGAGGTCAACTGTAGTACAG 57 8759188 8759267 CACCAGAGAAACCTTTATCCC 58 NA Drosophila melanogaster 61 Su(fu) FBgn0005355 FBtr0082665 3 1 1 60 3R 8516120 8516140 ATTTCACTGGACGGTATTGAG 58 8516080 8516098 CCAGTAGGAGGTACTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4860 FBgn0037999 FBtr0082623 3 1 1 118 3R 8046700 8046849 GAGAGGAGTATGGTGGTTCC 59 8046601 8046621 ACCCAGGTACAGGTTATTCAC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 1 8 8 80 3R 5954403 5954423 ATCTCCAGGGATTACTTGAGC 59 5954229 5954363 TTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 2 1 1 65 3R 4620576 4620594 GAATCAAACCTCCCACGAG 58 4620623 4620732 TTCGATATGTCGCACTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14654 FBgn0037273 FBtr0078883 1 1 1 77 3R 593685 593709 GAAACTACGGTAGATATAGATACCC 57 593632 593650 TTACGCATGCATATGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mur82C FBgn0037260 FBtr0078930 2 1 1 60 3R 368733 368752 CTTACCAATTGGTCCACCTG 58 368775 368793 TGTATCCGCCTCTATTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456,FBtr0112455 2 2 2 103 3L 21190182 21190203 GACAGTTGTTGAATTTGCAGAG 58 21190265 21190285 GCTGGATTTCTTGGTGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17637 FBgn0037004 FBtr0078207 1 1 1 60 3L 20498646 20498666 ATTCGGAGACTGATCTTAAGG 57 20498688 20498706 ATGGCACTTATGACGAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 2 2 2 80 3L 20296381 20296400 GATCATGGTCAACCGAAGAG 58 20296442 20300946 CAATCTGATATGGCGTCTGC 59 NA Drosophila melanogaster 61 Shal FBgn0005564 FBtr0112853 2 1 2 85 3L 19565444 19565462 GACAACTATCGGGACGAGG 59 19562900 19565397 ACAAATTCTCGATCCGTTGTC 59 NA Drosophila melanogaster 61 CG32210 FBgn0052210 FBtr0074974 3 1 1 80 3L 19543182 19543200 TCGTGTTTGAAATCCTGCC 58 19543062 19543140 GTTGTGGAAGCTTCATGAGAG 59 NA Drosophila melanogaster 61 CG18265 FBgn0036725 FBtr0075219 2 1 1 108 3L 17433002 17442503 GCCGGAGACATTTAATATCATCC 59 17442571 17442589 GTCGATGAGTTGGAGACGT 59 NA InUTR Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 1 2 2 82 3L 17423270 17423288 CGAGATATCGCCCTTCCAG 59 17423149 17423225 TCATGTCATGACGTCTTGGA 59 NA Nonspecific Drosophila melanogaster 61 CG13048 FBgn0036593 FBtr0075475 1 1 1 60 3L 16276606 16276626 CACTACAATCACTTCGATCCC 58 16276566 16276584 AGTGGCTCAGATGATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32847 FBgn0052847 FBtr0075639 1 1 1 60 3L 15115078 15115102 ATCATCTTATCTGGATATGGACGAG 59 15115119 15115138 ATCCCTTATGCCGTGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 2 2 2 163 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113896 15113914 TACAGGCGATAGCAGATGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG17173 FBgn0036447 FBtr0075701 2 1 1 60 3L 14761747 14761767 TTTGTACTACCTGCAACTGGA 59 14761707 14761727 GATGTAGTCCATGAAACCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075842 2 1 3 87 3L 13375928 13376021 CATCGTAGCAGTAGCAGCT 59 13376072 13376090 ATAGTGATGATCGGAGCCC 58 NA Drosophila melanogaster 61 trn FBgn0010452 FBtr0075890 2 1 1 291 3L 13107780 13107801 TCACCAACGATTTAATCTGCTG 59 13108495 13108513 TTATCATCGCACTGACAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 2 2 2 89 3L 13035389 13035407 CACCAAGATCGTCATGCAG 59 13035459 13035551 GTGATGACATCCATGTAGCC 58 NA Drosophila melanogaster 61 CG32115 FBgn0052115 FBtr0075904 2 1 1 127 3L 12906083 12906163 TATACCAGGTCGTGAAATACG 57 12905976 12905996 CCAAGGTACTCAATTTAGGGT 57 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913,FBtr0075914 3 2 2 80 3L 12731435 12731454 AGTCGAGATGTCTTCGATGG 59 12731492 12731573 GTTTCGATCCCGAACTATTATCTC 59 NA Drosophila melanogaster 61 CG32105 FBgn0052105 FBtr0075953 1 1 1 80 3L 12328172 12328266 CTTCTCACCGGATGACTATCC 59 12328308 12328326 TCAAAGTTGCTCCCATCCA 59 NA Drosophila melanogaster 61 CG11534 FBgn0046296 FBtr0075995 2 1 1 94 3L 12126030 12126048 CTCCCAGGGATACAAGTGC 59 12126155 12126176 AGTACAATCCACTATAGTCGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 1 2 2 96 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094454 11094477 CTCCAGGCAAATATAACCATTGAG 60 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 1 3 3 80 3L 10214542 10214561 GCATCAATTTCCCACTGGAC 59 10214220 10214501 AGAACATGGCATCTATGAGGA 58 NA Drosophila melanogaster 61 CG3437 FBgn0035998 FBtr0301032 1 1 1 80 3L 9449768 9449874 GATAAGGAGGAGTTTGTTGCAG 59 9449709 9449727 CGCAACAAGTAAGGAACCG 59 NA Drosophila melanogaster 61 CG42526 FBgn0260431 FBtr0300855 2 1 1 80 3L 9428421 9428443 CGAGAAATACCACACTAGATACG 58 9428309 9428384 CAGTACTCAACTGATTTCTGGC 59 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 2 4 5 228 3L 7361074 7361998 AATAAGGAGGTGAAGAAGCG 57 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 2 9 9 81 3L 7176524 7176543 AATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 CG6602 FBgn0035673 FBtr0077047 2 1 1 60 3L 6065373 6065393 TTGCTATACCACATCGATGTC 58 6065415 6065433 TTGGATTATCCTGGGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bre1 FBgn0086694 FBtr0077116 2 1 1 80 3L 5785848 5785866 GGAGCTGGATAAGCTTCAC 58 5785672 5785804 GGCAACTGTCGTATATCCA 57 NA Drosophila melanogaster 61 Klp64D FBgn0004380 FBtr0077157 1 1 1 60 3L 5351384 5351402 GTGGTAACTCCAAGACCGT 59 5351342 5351363 TCCATATAATTGCTATCCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 3 2 2 94 3L 4402149 4402236 CATGAAACCTATTTGCTCCG 57 4402293 4402311 AGAAACGTCCTGTGAAACC 58 NA Drosophila melanogaster 61 CG14957 FBgn0035412 FBtr0073038 1 1 1 111 3L 3187597 3187678 GTATCACTGCTCCTGGTCC 59 3187749 3187771 CCGATTTATCCACATTCTGACAC 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 1 2 2 80 3L 1769509 1769597 TTGCCGAGCTTATGAAATGC 59 1769448 1769466 GCTCAAGGTACTCGAAGGG 59 NA Drosophila melanogaster 61 5SrRNA:CR33376 FBgn0053376 FBtr0086368 1 1 1 60 2R 15645223 15645241 ATACATCGGTTCTCGTCCG 59 15645181 15645199 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2811 FBgn0035082 FBtr0072412 2 1 1 81 2R 20827644 20827666 ACTGGACATACTAGAAGACTACC 58 20827527 20827606 CTGAATGGTTTCATTCTGTTCC 58 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 2 4 4 138 2R 18693054 18693179 CACTAAAGTTACAGTCAAGTCCAG 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG30268 FBgn0050268 FBtr0273311 2 1 1 80 2R 18601084 18601155 ATTGCTGAGTTCGAGGAGG 59 18601193 18601217 CTTAATATCAAGGGACTGAGATAGC 58 NA Drosophila melanogaster 61 Gr58c FBgn0041237 FBtr0071727 3 1 1 80 2R 17865177 17865195 TTATTCGGGAAGGCAATGC 58 17865296 17865314 CGATTCATGTAGAGCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 3 2 2 80 2R 17375862 17382649 AAATTCGACTCGAGCTTCG 58 17375800 17375820 CTGATCCCAACCCTTAATCAC 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 3 6 6 84 2R 17299915 17367607 GCTCAAGATCAGAAATCGGTG 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 CG9752 FBgn0034614 FBtr0071616 1 1 1 69 2R 17182794 17182812 CTTTGTGTTGGACACCCTG 59 17182687 17182708 GCCATCGACCTTATATTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 3 2 2 86 2R 17038546 17038564 CAACGGGAATGCCAATCAC 59 17038419 17038496 TTACGTCGACCCTTAGTCG 58 NA Drosophila melanogaster 61 CG15225 FBgn0034551 FBtr0071513 3 1 1 61 2R 16680776 16680794 CATACTACCCGTACCCACC 59 16680819 16680837 GTACGGTGAGTAGTGTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6484 FBgn0034247 FBtr0086903 2 1 1 80 2R 13470792 13470810 CGATATCGATGACGAGCTC 57 13470314 13470749 GAGGACAGAATGTTGACCTG 58 NA Drosophila melanogaster 61 RpL18A FBgn0010409 FBtr0086947 1 1 1 113 2R 13434479 13434921 AGGGATTGTTGAAGGAGTACG 59 13434386 13434404 ATTTGGCCACGATGTTGTC 59 NA Drosophila melanogaster 61 CG18631 FBgn0034239 FBtr0086944 1 1 1 80 2R 13430865 13430943 CTGGAATCGAGCCTTTCAG 58 13430987 13431005 TATCGTCCTCTGGAGAAGG 57 NA Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 3 2 2 80 2R 13403019 13403094 TGCGGTTTCTATCCTAAACAC 58 13403135 13403154 ATGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 robl FBgn0024196 FBtr0086920 1 1 1 80 2R 13344207 13344296 GGTCAACAATGAAGGTATTCCG 59 13344337 13344355 AGCTGACTCATTAGGCCAG 59 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 3 3 3 80 2R 12929166 12929186 ATCAAGAAGAATCCTAGCGTG 58 12929226 12929313 TTTATCATCCTGCTTGGTCAG 58 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087074,FBtr0087072 1 3 3 116 2R 12753591 12753668 AACGTTATGCAACGAAATGG 57 12753494 12753512 ACCTTGAGCGTGATTTACG 58 NA Drosophila melanogaster 61 Nox FBgn0085428 FBtr0112650 3 1 1 80 2R 12199788 12199806 TCTGCGGTGAGAACAAGAG 59 12199847 12199933 GGTATAGCTTATCGAGGATCCC 59 NA Drosophila melanogaster 61 CG13018 FBgn0040751 FBtr0087581 2 1 1 114 2R 10044826 10044844 TCTCAAGATGTGCCTCCTG 59 10044730 10044748 GTAGAAGGTATTGCGGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 1 2 2 86 2R 9043366 9043590 ATATGCTCAGGTTCTCCGT 58 9043298 9043316 AATCGATGGAGTTACGCTG 57 NA Drosophila melanogaster 61 Drl-2 FBgn0033791 FBtr0087794 2 1 1 80 2R 8954777 8954871 AGCATATTCGACCGTTTCC 58 8954715 8954734 GGTCTGTTCAAGGTTCATGG 58 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0302321 1 1 3 121 2R 8838848 8839362 TTGTGACCGTTGACAACAC 58 8838745 8838763 TTCGTGAAAGGATCGACCC 59 NA Drosophila melanogaster 61 mRpL18 FBgn0026741 FBtr0087852 2 1 1 60 2R 8644509 8644527 TCCTTCAAGGAACCCTCTC 58 8644550 8644569 TCTCATGCCTCTTCTCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 2 1 1 61 2R 8433566 8433645 CCTTACAACGTAAGTGAATCATACC 60 8433662 8433682 GTATCGGTCAAGACAAAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 cag FBgn0017414 FBtr0088239 1 1 1 80 2R 6781293 6781370 GGCCAAGAGGTTTAACATTGG 59 6781233 6781254 CTCAACAGACCCTCTTTAATCG 58 NA Drosophila melanogaster 61 CG12912 FBgn0033497 FBtr0088365 1 1 1 175 2R 6121608 6121626 CTGACACTACCGAATGCTG 58 6121451 6121469 TGTGGTCGTTGTCATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 3 3 3 107 2R 5982043 5982062 ATACCATCGAACCGGAATCC 59 5982132 5982211 GTCTCGAGTCTTCTGCCAG 59 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 1 2 2 80 2R 5966680 5969022 CACTAACGATCTGGCAGAC 58 5969066 5969084 GGAGATTATCGACGACTCG 57 NA Drosophila melanogaster 61 CG8235 FBgn0033351 FBtr0088676 1 1 1 63 2R 4815383 4815457 ATTGAAGCCGAGATTTCCG 58 4815338 4815356 TGATCAGCTCCTGCTTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8243 FBgn0033349 FBtr0088652 2 1 1 76 2R 4810588 4810606 ACAACAAGTACTGCGTGGA 59 4810798 4810816 GATGCAGAGAAACATGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CSN7 FBgn0028836 FBtr0088742 1 1 1 80 2R 4315233 4315254 GAAATGCAGATTAAGTACGCGA 59 4315292 4315506 ATTGATGAGATCTTGTTCCACG 58 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 1 3 3 82 2R 3877500 3877518 ATACACGACGTGGTCTTCG 59 3877563 3877643 TCCTCGTCCCAAATCTTGAC 59 NA Drosophila melanogaster 61 CG30378 FBgn0050378 FBtr0088854 3 1 1 60 2R 3838208 3838229 GGACTTTCTATACGTGATGAGC 58 3838250 3838268 CTTTAGGCACACCAGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U3:22A FBgn0003926 FBtr0077928 2 1 1 60 2L 1432715 1432733 CATCGACGGGTATCATCCT 58 1432756 1432775 GCAAATCATGCAAACACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11629 FBgn0032965 FBtr0085950 3 1 1 60 2L 21896964 21896985 AGATGATGCAGAAAGCTAAGGA 59 21896925 21896944 TCGTCACCTGTTGAGATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33830 FBgn0053830 FBtr0091834 1 1 1 60 2L 21479917 21479936 CGCTCAAGACTTTAAGACGG 59 21479959 21479977 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33812 FBgn0053812 FBtr0091816 1 1 1 60 2L 21440468 21440486 CGCTCAGGACTTTAAGACG 58 21440510 21440528 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG31618 FBgn0051618 FBtr0085893 1 1 1 60 2L 21424015 21424037 CTAGAATTATTCCGCGTCATCTG 59 21424056 21424075 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp39D FBgn0032943 FBtr0273404 2 1 1 113 2L 21356579 21356597 ATACTCACGCAACTCAGCA 59 21356672 21356749 TAGTGAGCATCTGTATACCCG 58 NA Drosophila melanogaster 61 CG13082 FBgn0032803 FBtr0081251 1 1 1 60 2L 19539172 19539191 CGGAGTTGATTCAAGCTCTG 59 19539214 19539232 AGGAGATTAGAACCGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 3 2 2 83 2L 18141799 18141817 GTATTGCGAAGTGCTCGAG 59 18141241 18141752 CTTCTGGAAACTGGCTTGC 59 NA Drosophila melanogaster 61 rdo FBgn0243486 FBtr0081029 1 1 1 80 2L 18062550 18063813 CTGCGGATATTAGATCTGTCCA 59 18063853 18063872 TTCCAGTAGGTTGTCCTGTC 59 NA Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 3 2 2 80 2L 17197081 17251522 CGGCACACTGAAAGATTTCC 59 17197020 17197038 GCGGTACCCTTAATCACGT 59 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 2 1 4 216 2L 16622826 16652745 ATGTCCACGGAATACGGTC 59 16657511 16657529 TGTAGAAATGCGAAGTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 twe FBgn0002673 FBtr0080855 1 1 1 84 2L 16261497 16261600 ATAGATCAGGATGGCGAGC 59 16261431 16261450 GAAATTCTCCTGACCACACG 59 NA InUTR Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 3 2 2 92 2L 15230349 15236618 TTGGTGAATGTCATCATGGG 58 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 CG4701 FBgn0028868 FBtr0080672 3 1 1 60 2L 14767101 14767119 GAAGGCGTCGAAACATCAG 59 14767143 14767161 TCAGTCCAACTCCAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CSN1a FBgn0028838 FBtr0080671 1 1 1 60 2L 14763560 14763579 ATATACAAGTCTGCTGCCCA 59 14763602 14763620 TATCGTAGTCGTAACGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42685 FBgn0261571 FBtr0302857 3 1 1 86 2L 14728576 14728594 CTAAACGAACCGGATAGGC 58 14728449 14728527 CATATAGCAACGAGCTACCG 58 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 2 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068916 14068939 GGACGTTCTAGTGTATTATAGGGA 59 NA Drosophila melanogaster 61 Osi21 FBgn0032359 FBtr0080214 3 1 1 121 2L 11284711 11284898 CATAACAGACGCAACACCT 58 11284608 11284627 TAGTAGCGATACGGATCCAC 58 NA Drosophila melanogaster 61 CG31867 FBgn0051867 FBtr0080224 2 1 1 60 2L 11144798 11144816 CATTCACAGCAGAGACCAC 58 11144756 11144776 TCCGAGAAGTTCATTGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 3 3 3 83 2L 8564222 8564243 TACTTACAGTCCTCGTGATTGG 59 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 3 2 2 82 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195910 8195929 CGTGGGTGTAAATGATCTGC 59 NA Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079445,FBtr0079444 3 2 2 85 2L 7428209 7428291 CAACGAAGGTGACTTGCTG 59 7428340 7428358 TCTTAGCCAGAAAGCCCTC 59 NA Drosophila melanogaster 61 Tsp26A FBgn0031760 FBtr0113024 1 1 1 98 2L 6001071 6001164 CAAGGAGGGATATCCGGTG 59 6001225 6001244 CCAATCGCCACACTAATCAG 59 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 2 3 3 80 2L 5356385 5356634 GGACAATCAAGATCGCACTC 59 5356676 5356695 AACTTGTCGGCCAGTATCTC 59 NA Drosophila melanogaster 61 CG3008 FBgn0031643 FBtr0077389 1 1 1 126 2L 4884223 4884241 ATAACAAAGCACGATCCGC 59 4884327 4884400 GGTTAAACACCTTATTGGAGAGC 59 NA Drosophila melanogaster 61 morgue FBgn0027609 FBtr0077457 1 1 1 117 2L 4444546 4444564 AGTTGCTAAAGGAACTGGC 58 4444385 4444466 CAGCAGGTGTTACTATTCGA 57 NA Nonspecific Drosophila melanogaster 61 Tps1 FBgn0027560 FBtr0077431 2 1 1 84 2L 4390631 4390649 GCTTTCTTCCTGCACATCC 59 4390694 4390807 CCAACATACCCTGTAGGATCTC 59 NA Drosophila melanogaster 61 CG2955 FBgn0031585 FBtr0077468 1 1 1 60 2L 4150399 4150420 ACCCATGACATTCATAGAACTG 58 4150440 4150459 GAGAAACTCGTTCCTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sr-CIII FBgn0020376 FBtr0077466 1 1 1 80 2L 4121187 4121268 CAGAAATATCTGCACCAAACTC 58 4121309 4121327 ATCTCGTCGATGGAGATGG 59 NA Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 3 1 1 65 2L 3529180 3529256 AATAAGCTGAATGAGCGCA 57 3529133 3529151 ATTAAGCTGCCGCTCTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077606,FBtr0077605 1 3 3 87 2L 3292103 3292184 CCAGAGATATGTTTGCTGTCC 58 3292036 3292055 CCACCTATCTGCCAGTAGAC 59 NA Drosophila melanogaster 61 ush FBgn0003963 FBtr0078063 3 1 1 80 2L 524039 524059 TGCTTAGCAGCAATACAAGAG 58 525430 536037 TCAGATCTTTGGAATCTCTGCT 59 NA Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083 1 1 2 116 2L 478199 479419 CAAGTTGGAAATCGTCGCC 59 478101 478123 GGATTTGGTGTAATAATCCCTCC 59 NA Drosophila melanogaster 61 MED15 FBgn0027592 FBtr0078062 2 1 1 83 2L 475104 475125 CTGGAGACTCTACTTAAGTGTG 57 475168 475241 TGAGGATTTACCAAACTGCT 57 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 1 4 4 80 2L 124010 124094 GGGATTGGACTCTTATGTATCTG 58 123952 123972 CAATGTCATAGTAGAGTGCCC 58 NA Drosophila melanogaster 61 Nhe1 FBgn0026787 FBtr0301452 1 1 1 82 2L 106021 106041 TCGGTACAACAATTTCTGCAC 59 105906 105977 AAAGCTTAGGCGAAATGCC 59 NA Drosophila melanogaster 61 CG11376 FBgn0031216 FBtr0078103 2 1 1 81 2L 97766 97786 GCAATTAAGCGAATCGTACAC 58 97828 97897 ATCTATGGACAGCTCTTTGC 57 NA Drosophila melanogaster 61 CG11374 FBgn0031214 FBtr0114507 3 1 1 60 2L 76957 76977 TTTCCGAGTATCCTATACGCC 59 76996 77017 TTGTTTGAATGTGGAATGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 3 3 8 121 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119968 119988 CTGCTATATTGAAGGGAGCTG 58 NA InUTR Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 3 2 4 126 2L 128931 130517 ATAATAATCTACTGGGCACAGC 58 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 3 4 5 118 2L 344388 344406 AAAGATTAAGATCGCCGGC 58 344486 344571 GCGGAGAAAGACAATTAAGAC 57 NA Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 3 2 2 80 2L 357474 357493 CCTACCTCGTGTTCTACCTG 59 357182 357432 ACTTCCAGTAATCTTCCGCA 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 2 5 6 196 2L 1726645 1727654 AAGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 1 2 2 84 2L 1855724 1855745 GTCCCATTGAATTGCATAATGC 59 1855790 1856440 CAAATGGTGACCACAACGG 59 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 1 3 3 81 2L 2229747 2229769 TCTACTCTTCGATATGACGACAC 59 2229805 2229892 CACAGAATCTTGGATCTTCTTCAC 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 3 4 4 81 2L 2495422 2495442 CTGATAACGCTGGAGTTTCAG 59 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 2 7 7 80 2L 2963121 2963234 CAATCTGTTAAGGTGATTCGTG 57 2963273 2963293 CTCTTCGTAATTCGTCATGGT 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 2 7 7 80 2L 2963121 2963234 CAATCTGTTAAGGTGATTCGTG 57 2963273 2963293 CTCTTCGTAATTCGTCATGGT 58 NA Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230 2 1 3 84 2L 2995058 2995417 TGCGATCCTTCAGACACTG 59 2995465 2995483 GATCAGGTCCAGGTACGAC 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0077663 2 1 6 154 2L 3108858 3112107 AACATCGGTGAAAGGTGGA 59 3098063 3108740 CTCGCAATTGAGTGTTTGC 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 3 4 11 180 2L 3626210 3634251 TATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 1 5 6 80 2L 4192682 4192703 ACCTTAAAGACAACAACCACAG 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 1 4 4 82 2L 4845307 4845325 AACCGACCAAGATTCCTGG 59 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079038 1 1 11 135 2L 4994986 5008190 TACGGATTGGTGGAATCCC 59 4994869 4994887 TTAGGAGCGACAAGTAGGC 59 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 2 3 3 100 2L 5307903 5308029 GCTTCTAACTTGCATCCGT 58 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 1 3 3 87 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095143 6095248 GTAGAGCGGATTCATATTTGGG 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247 1 1 4 87 2L 6680045 6680063 AATGATACCGGGAACGGTC 59 6679253 6679994 AGTGAACAGAGCGACTCAG 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 2 2 3 81 2L 7059186 7060972 CACAAAGGAGGAGAAATCCA 57 7061016 7061034 GAGAATCTTCTCGCCACAG 58 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 3 4 4 80 2L 7403302 7403320 TGAGAAACAAGTGGCACCT 59 7403358 7403562 GGACTTTCAGAAATTAGATACCCAG 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 3 4 4 80 2L 7444384 7444469 TTATCGATATGGAAGGGCTG 57 7444510 7444530 GAATGTAATCCAGCAACATGG 57 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 3 4 4 81 2L 7727745 7727837 CTGTGTCTGTTTCAACTAACCT 58 7727685 7727703 GAATCAAGCCCTGACTCAC 58 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 1 2 2 84 2L 7797721 7798170 ACTCTACGTTCTACGTTGCC 59 7797656 7797674 CAATCAGTGGGACTGAGGG 59 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 2 2 2 86 2L 7797721 7798170 ACTCTACGTTCTACGTTGCC 59 7797654 7797672 AGCAATCAGTGGGACTGAG 59 NA Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534 1 1 2 80 2L 8013091 8024522 GCAGATCTTGAAGATGGCG 59 8024566 8024584 CTCCTCATGGTTGTCCTCC 59 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935 1 1 2 91 2L 8213268 8213340 AATTCCAGAGCCTGGATCC 59 8213394 8213413 GGCAAAGTTACTGTACGGAC 59 NA Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 1 2 2 166 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332448 8332466 AATTGATCACCGTCTTGCG 58 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 1 2 2 84 2L 8364197 8364215 AAGAAGGGTCTGACTCCCT 59 8364069 8364087 TGTTTCCGTTGACGAAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 2 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 2 2 2 85 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935749 8935896 ATTACGCCAAAGAACTGGAG 58 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 1 3 3 80 2L 8944159 8944242 GACGGATGAGGGACTTGAC 59 8944097 8944118 TCCAGCACATACATTTGATTGG 59 NA Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 2 2 2 91 2L 8996806 8996824 CTACATCAAGAGTGCCGTC 58 8996670 8996751 GCAGTGCCATATTCTTCGA 58 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079818 1 1 2 170 2L 9252774 9252792 TCTGAAGATGCCCGAAGTG 59 9252338 9252641 TCTGTAAGGTAGCCTTCGTC 59 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0079842 2 1 3 140 2L 9617487 9617505 GGATCTGCCTGATAGGTGG 59 9617603 9621162 GCCGGAAATTCATACTATCTAATCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079912,FBtr0079914,FBtr0079915 2 4 6 97 2L 9802415 9806444 GGAGTTACAATTCTTCTATCGCTC 59 9798296 9802360 AAGTAGGTGCCTAACAAGGG 59 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 1 5 5 80 2L 10297752 10297773 AATCGAGGTAGAAGACGAATCC 59 10297595 10297713 CAAGTAAATAAGCGTACGCCA 59 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 2 2 2 60 2L 10300382 10300403 CTCCAGACTTTGTCAATAGCTC 58 10300343 10300362 TAGGCATTAGCCGATTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 1 2 2 88 2L 10343347 10343423 ATAATACTACCGTCAAACGCG 58 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 1 2 2 86 2L 12060457 12060475 TATCTCCCACGATGAGGCT 59 12060330 12060410 AGAGGCTTACTTAGTATGGCTC 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 2 3 5 81 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271636 12271654 GTGTATGGGACTATTCGGC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 3 2 17 143 2L 12736124 12736142 TATGCATTGTCCCTCCGAG 59 12736248 12737969 GTAGCCAGAACCTGAAATGC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 2 2 17 126 2L 12727003 12727021 AAATCGGCTCGAATCTGTG 58 12727111 12737410 AATGACGTGAAACCTTGGC 59 NA Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 3 1 1 122 2L 13073311 13073329 GTCTGCTATCGTGCAACAC 59 13071804 13071822 ACGAACTACGTCCATCCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 2 3 3 105 2L 14357443 14357527 CCGAGAAGAAATTCATGGCC 59 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 2 2 2 94 2L 16310058 16310078 ATACTTTGTACCGGAACATGC 58 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 3 2 2 175 2L 16744377 16744700 AGCGTACAGTAATGCTACCA 59 16744835 16744856 GTGGATGCATAATCTTTGTGGT 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 2 3 16 80 2L 16779140 16779159 AGAAATGCACGAAGGTTCTG 58 16779199 16780559 GGAAGAACACCTTTGTGTTACC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 1 4 12 83 2L 17717888 17717910 CCAACGATCTGGAATACTTTGAG 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 2 4 12 113 2L 17717920 17717940 TAGTATACAGCCTGACTGCTC 58 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 3 4 12 88 2L 17715907 17716689 GGTTGTTATCCACGTGACC 58 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 CG17325 FBgn0040993 FBtr0081102,FBtr0299685 1 2 2 291 2L 18813143 18813319 GTCTATCTAAACACCTGTCTTCC 58 18813570 18813588 TTCCGCAGGAAACTATCCG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 3 2 3 186 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123380 19123398 ATGAAGAAGTGGGTACCCT 57 NA InUTR Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 3 2 2 80 2L 19186184 19186264 GCTATAAAGAGAAGGCAAACGAG 59 19186303 19186322 ACTCGAATATCCAGGACGTG 59 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081213 1 1 6 80 2L 19411587 19411607 GATATCATCGTCGTTCCACAG 58 19410634 19411546 AATAGAGCATCCAGACGTCG 59 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 3 3 3 85 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457305 AAATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 1 2 3 80 2L 19779320 19779407 CCTGTGCATACCAACAACG 59 19779258 19779277 CACATGCAGCTTGATCTGAC 59 NA Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 2 2 2 84 2L 19959684 19959762 CATCTTCGTGTACGATGAGC 58 19959808 19959827 GATTTCCAGGTCGATGATGC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 2 4 9 130 2L 20876958 20876976 ATCTGCCCACTAGTCAGTC 58 20874424 20875092 CGTGAACAGAAATTGTCTATCC 57 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 1 4 4 88 2L 21255234 21255252 GAACTTCGGTCAAGTCGGA 59 21255302 21255546 CATGATTTCCTGCAGTAGTGG 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 3 3 4 84 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257178 GTGTAAGCTTGCAAGCTCTG 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 1 4 4 80 2L 21388772 21388792 CTTTGCCAGATCATATGCCAG 59 21388831 21388923 CTACATTTGTTTCATTGGGCCT 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 1 4 4 80 2L 21388772 21388792 CTTTGCCAGATCATATGCCAG 59 21388831 21388923 CTACATTTGTTTCATTGGGCCT 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 1 3 3 109 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 1 3 3 153 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040327 GCAGAAATATCTGATCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 3 5 5 74 2R 1491753 1491771 ATGATCAAGTTCGCTCCCT 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 1 3 3 135 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 2 11 11 89 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764847 2764865 GAACATCCTTGACATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 2 5 11 142 2R 2764834 2764852 ATGTTCTCCGATCAGGCTG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 2 2 59 82 2R 3247642 3247660 ATTCTCCGGGTGTATCTGG 58 3236472 3247598 TTGTACCATCTAAAGAAGGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111094 1 1 59 81 2R 3243525 3249236 ATTGGTCATCACAGAGCCC 59 3243462 3243481 AATGGCAATACGATCGTGAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 1 3 59 81 2R 3241438 3249237 GATTGGTCATCACAGAGCC 58 3241375 3241394 ATGGACTCCACAATATTGGG 57 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0300954 3 1 2 83 2R 4004719 4004737 ACTGGAATCTGCCAAACGA 59 4004510 4004672 TTGGACTAGAACTGGAGCG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 2 4 9 149 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564107 4565947 GCACGATCTTTGCCTTCAC 59 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290278,FBtr0290279 1 2 2 94 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838217 4838236 GAAGGTTAAACGGAAAGCGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 1 3 3 104 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 1 2 2 115 2R 5095794 5095812 GTTTGTGACCTTCGAGGAC 58 5095963 5095981 CCAGGTACAGATAAGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0301511,FBtr0088603 2 3 10 106 2R 5143203 5146353 GATCAGGAGGTTATACCACAG 57 5143117 5143136 ATAGTAGGAGTAGCTGGCTC 57 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 2 2 5 92 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354443 5354461 GTATTCCAACGATGACGCT 58 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0301766 1 1 5 91 2R 5360663 5360753 TCTCTGAGGATAGCCACAC 58 5360808 5360826 GTTCAGGGATAGCGATTGC 58 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299846,FBtr0300527 3 2 5 110 2R 5362613 5362631 CATGACAGCTATGCTCTGG 58 5362705 5362827 CGTAGATACCTCGCAAAGG 57 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245 2 1 5 121 2R 5395648 5395666 TAACTAGCTCTGGTGTGCG 59 5395751 5397403 ACTGCCCATTGCTAAAGGA 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 2 3 5 83 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884052 5884070 CGTAGTCGTCAATGTTGCG 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 2 2 3 80 2R 5919132 5919152 TTGTCTACTGCCTGTATGTGG 59 5918912 5919090 CATTTAGCTGTCCTGCACC 58 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 3 4 5 98 2R 5948860 5949131 TTTCACAACCGTAGTGCTG 58 5949193 5949211 ATTGACGTTGGTGTTGTGG 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 3 3 4 106 2R 6034471 6034493 GTGCTTAACTCATATCAGTTGGG 59 6034320 6034409 CTATGAAGGCTTAACGTAACACG 59 NA Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 2 2 2 80 2R 6146886 6146904 ACGCGGATATGGATACGAC 59 6146945 6147030 TAGTAGCGATCTCTGGATAACC 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088344 2 1 17 80 2R 6187766 6192142 CTTTAAAGACGTGAACATCCAC 58 6192183 6192201 ATGGCTAGTTCCTCTTCCG 58 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 2 2 3 81 2R 6343082 6343100 CCTTATTCGGAAGTACCGG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089364,FBtr0089354 1 2 26 92 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6378544 6419549 GTCCAGTAGCCATCTTGGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089354 2 1 26 96 2R 6377744 6377763 AATCAAGGGATCCCTCAAGC 59 6377303 6377687 CAAGACACATTTGCACTTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 CG33144 FBgn0053144 FBtr0088254,FBtr0302517 2 2 2 112 2R 6628680 6628758 CAGTTTGGATGATGACTTCCTG 59 6628589 6628607 AGATCCCAATCACTTGGGC 59 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 1 4 4 80 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269385 7269466 ACCGTGATCAACCTTATCG 57 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898 1 1 2 83 2R 8219530 8219548 TCTTTGGGAGCTAACCTGG 59 8219592 8219664 GTAATTGAATCTTCGTCGTGGA 58 NA Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 1 1 1 60 2R 8317038 8317056 CTGCAGAGAACTCTCAGCT 59 8316940 8316960 ACTGTGAAGCGTTTGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087876,FBtr0300390,FBtr0087877,FBtr0301490 1 4 8 200 2R 8560839 8563642 ATAATGCCAAGCTCCATCG 58 8560657 8560678 CGTAGTTATTTAGCTTGTGCAC 58 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 3 2 4 116 2R 8745742 8749271 GGATGTGATTGAAGCAATCAG 57 8745646 8745664 CCACGGGTCAGAAATACAG 58 NA Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112741 3 1 2 133 2R 9046592 9047239 ATCCCTACAAGATGAACGGTC 59 9047334 9047352 TTTCTCCCTTAGCTTCCGC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 2 5 12 83 2R 9303457 9306505 GAACCGCGATCTTCATTCAC 59 9303393 9303411 ATCCGTTTCGACTCTCGTG 59 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 3 3 3 99 2R 9407188 9407340 CTGACTCACAGGATTGGCT 59 9407048 9407067 GTACCAGGTAAGATCGTCCA 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 3 5 5 150 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426351 9426485 GCGGCCATCTTTAAAGGTC 59 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 3 2 2 116 2R 9741671 9741689 TAAGATCTTCGCTAGCCGC 59 9741377 9741395 TCGGTCTTGATGTACTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0273225,FBtr0087618,FBtr0087619,FBtr0301592,FBtr0273226 2 5 15 200 2R 9805406 9809060 AGTTTAAAGACGAACGCGA 57 9804490 9804508 TCTGCAGCATATGGAAACG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 1 9 15 127 2R 9759583 9759601 ACCACAAGGAGTTCATGGA 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795 1 1 8 87 2R 10067359 10067377 GCCTTCTTCCAGAAGAACC 58 10067428 10067936 GTACAACAAGCTGTTGCTG 57 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 2 3 3 158 2R 10116658 10116676 CTTCGGTATCTGCATTGCC 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089258 3 1 2 85 2R 10389957 10390045 CTGCCTACAAGTTTACCCGA 59 10389891 10389915 CACTCTGATTGAGATAGATTACAGC 59 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 1 3 3 97 2R 10860180 10860198 TAAGAATCCGCATCATCGG 57 10860259 10864760 ATTCCTCTATGGATCCCGG 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 1 4 6 80 2R 11172467 11178447 CCAATTGGGTGTTTCACCA 58 11172405 11172425 GGCATGGTATGAATTTGATGC 58 NA Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 3 2 2 80 2R 11406699 11406788 AGTTGATGAGGAGAGCAAGG 59 11406638 11406656 TACGGCCGGATTAACACTG 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556,FBtr0302555 1 2 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302790,FBtr0302791 1 5 13 100 2R 11838964 11840353 ACTTAACATGACGTTGGAGTC 58 11838884 11838902 TCACCTGCAGACAGATCTC 58 NA Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 1 2 2 80 2R 12008553 12008574 GACCCGAATACTTTATGGACTC 58 12008613 12008699 TCGATAGGAATCCAAAGGGTC 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 2 6 6 80 2R 12676157 12676302 CTACTACACTATAGCAGCCTCG 59 12676343 12676361 TCCAACTGCTTGATGGAGG 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 2 2 3 169 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752378 12752397 TACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0087048 3 2 3 104 2R 12819991 12820011 ATTTCGAGCCATTCACATACG 59 12820077 12827609 TCATGTCACATGCTGAGCA 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 1 7 9 80 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958998 12959240 TTGAGCTTGAGTGTTATCACTG 58 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290299 1 1 7 80 2R 13239796 13260588 TCCGACAGATTAGAGTTACTGG 59 13260626 13260647 TCTACAATTTAACCGACTGCAC 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 1 3 4 84 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0299707 1 1 7 198 2R 13705039 13705057 ACCATGGTCACCATCTCAC 59 13705219 13708516 TTGAGCTTTCCACTCCAGG 59 NA Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 3 1 1 118 2R 13935996 13936014 ATCAGTGTTTGGTCCTGAC 57 13936152 13936170 GATTAAAGCCTGCTCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 3 1 1 126 2R 14552770 14552791 GTCTCAAGTCGACAATATTGCT 58 14552608 14552627 ACAAGCCGTAATATAAGCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 3 4 4 152 2R 14646792 14646903 GTCTTCCGCAAGACAAGTC 58 14646658 14646680 CCATATCCGTAGGAGATATTGGA 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0114623 1 1 6 80 2R 15043810 15043831 ATTACAACGTCGCCATAATTCG 59 15043870 15046256 CCGATAATACTCTGCTCAGCA 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290311 2 1 12 121 2R 15061858 15062395 GAATGCATTTAAGTTTGGCCAG 59 15062477 15062495 TGTTATATCCGCCCGAACC 59 NA Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 2 2 2 81 2R 15249503 15249525 CTTACTTCATCTACTTCTCGTGG 58 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 2 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286541 ATCCTGGAACTCTTTACTGC 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 3 5 19 97 2R 15361384 15361402 ACAAGTGGCATCATTCCAC 58 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 2 5 19 97 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361463 15362042 CGATCCACTGTTTGTCTCTG 58 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 2 2 2 169 2R 16150141 16150159 TCAATGAGGCAACCTTCGA 59 16149930 16149948 CAGAATCTTGGCCATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 1 2 2 80 2R 16156557 16156629 ACATTGGATCTCAATCCTTTCG 58 16156670 16156688 GATCATGCGGAAGATGCTG 59 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 1 2 3 96 2R 16215632 16215845 CATAACAGATCCCTCATTACCC 58 16215900 16215920 CTTGTCCCAATAATCGTTGGT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 2 4 15 149 2R 16908813 16910578 AGCAAACTGGTTGTTACGG 58 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 1 8 15 86 2R 16911249 16911490 CAAGCGAACATTCCAAATTGG 59 16911538 16911556 AAATCTGGGACTCATGGGC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 3 6 15 95 2R 16907280 16907298 CTGAATGCCACGAAGAAGG 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG15653 FBgn0034578 FBtr0071545 1 1 1 207 2R 16947835 16947854 CGCAGAGTACTACAAACTGG 58 16947590 16947608 TCTATCCGGCTGATTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 2 2 2 90 2R 17103409 17103489 TCTACTGTGATCAGCACCT 57 17103337 17103356 AGGATTTCCTCGGTAATCGA 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 1 2 8 134 2R 17185985 17191401 CCAGCCAGAACATAAATCGC 59 17191495 17191516 GATCATCGATGGTAAGATGTCG 58 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 2 5 5 200 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546236 TTATCTCCGTGTTCCTCGTG 59 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 1 3 3 80 2R 18113471 18113490 CGCTATACTACACGTTGGGA 59 18112904 18113430 ATGAAAGACTCAACAAAGCCG 59 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 3 3 3 81 2R 18113470 18113489 GCTATACTACACGTTGGGAG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 3 3 3 119 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631798 18631816 GAAGTCGTTCGACTACGTG 58 NA Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 1 1 1 62 2R 18825640 18825658 ACGCCAGAGATCTGAATGG 59 18826014 18826032 TCGTGAGGAAGGAACACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 1 2 3 102 2R 19279421 19280899 CAAGGAGACCTGGATCCTG 59 19279337 19279355 GGAGAGGAAGGTCTTGCAG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 2 4 4 90 2R 19941233 19941322 TTCCTTACAGCTTCTCGGC 59 19941161 19941182 CGATCCTTTGGGTTGAATAGAG 59 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 1 3 3 100 2R 19948509 19948685 GAAGAACATCAAGCACAGTGG 59 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 3 3 3 86 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865154 20865232 ATGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 2 7 8 118 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878690 20878708 TTCATCCTGGACCGATGAG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302573,FBtr0302575 1 2 8 98 2R 20887608 20887626 ACACCAAGAAGGTCATCCA 58 20885450 20885811 GATGACTACTAATGAGCACGG 58 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 1 3 3 80 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962847 20962923 TTATGGAACTCGTGCTTGC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072464 1 1 9 90 3L 129881 135472 CTATCAAGATCAACGGTACACAG 59 135522 135540 GATGCTACCGTGATTACGG 58 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539 2 1 2 87 3L 152266 152354 GGAGTATCTTTAAACGGTCCA 57 152199 152217 TTAGACTCTTCGGCTTGTG 57 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864 3 1 6 81 3L 153296 167485 AGTGCGCAGAAACTTTACG 59 167529 167548 TATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 1 2 6 81 3L 161362 167487 CATCAAATCGAAACTTTACGCC 59 167529 167547 ATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 1 2 2 61 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562951 1562969 GTTTCTCGCGATCCTTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 2 2 3 84 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573758 1574005 CCGAGGTTACTTCTGAGCT 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 2 5 5 99 3L 1635217 1635235 GATGATCATCATGGGCGTG 58 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 2 2 2 80 3L 1749639 1749721 GACCGAGTGGATAAGGAAGG 59 1749762 1749782 GGAATAGAGGGATCCATGGAC 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072856 2 1 3 121 3L 1945587 1945663 GTCAAAGTTGCATCAGATTCG 58 1945486 1945504 ATCGACTCCTCATTGGGAC 58 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 3 2 2 83 3L 2094062 2094080 ATTCTGTGTTCGTGTCACC 58 2093937 2094015 TAACGAGAGCCATGAACGA 58 NA Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 3 2 2 82 3L 2244947 2244965 GTCGAGCAATACGAATCCA 57 2245011 2245088 ATGGGCAGTATCAAGTCCA 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 4 5 163 3L 2607829 2607847 ATTGATCCGAATGTGCAGC 59 2604271 2607704 ACGTTGTTTCTGATGGTTACC 58 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 1 2 4 84 3L 2941549 2941572 GTCTCCTTCCATCATATCAATCTG 59 2941615 2942574 TTTGCTTTCCTGTGTCGAC 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 1 3 3 80 3L 3150144 3150225 GTACTTTCAGGCTTTGTTCAC 57 3150266 3150285 TTTAGGTCATCGTACTGCAC 57 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 1 5 5 64 3L 3300760 3300778 GTACCACCGATCTGGACAG 59 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 1 1 1 60 3L 3318699 3318717 GATTGGATGTAGCCATGGT 57 3318555 3318573 ATTGCTCCAAATATGGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 2 4 4 80 3L 3365680 3365698 GTGCGCAAGATATCCTTCC 58 3365742 3365819 CGACTGTTGCTTCATGGAC 59 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0073071 3 1 4 115 3L 3366205 3366224 CAACAATCCGCCACTTTACC 59 3366302 3367162 GCTGAAGAACCCGATTGTC 58 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258 1 1 2 93 3L 4180797 4180815 TCAGCTATTGGTACTGCCC 59 4179579 4180742 AGAAGTTTGTCTTCCTTGGTC 58 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 1 4 4 93 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289164 4289256 AAACCAAGTCATCCGAGCT 59 NA InUTR Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 2 4 4 94 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289164 4289257 TAAACCAAGTCATCCGAGCT 59 NA InUTR Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 1 2 2 83 3L 6121564 6121641 GTTTGTCTGTGCTCTGCTG 59 6121499 6121517 AAGCCGAACTTGTAGGGAC 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 1 6 9 124 3L 7157973 7158040 GTTTGCTACAGACACATGCT 58 7157868 7157886 ATGGTGGCATAATACCGCT 59 NA Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 2 1 1 78 3L 7233063 7233081 GTGCTCATCGAAGAGTGGA 59 7233181 7233199 TCTTAAGTTTGCCCTGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 1 11 15 80 3L 7693413 7693498 AACTGTACAAGGAAGTCATCCA 59 7693354 7693374 TAGCTTCGAATGGTTCTACCT 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 3 2 2 80 3L 8082713 8082790 AGTAATACGACTACTAGCTTGC 57 8082654 8082672 ACTCTTGATGCCAATGTCG 58 NA Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 2 2 2 98 3L 8126880 8126958 TTACCAGAGTCAATAGCAAACC 58 8126803 8126821 TAAGCTCCAACAGATTGGC 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076669,FBtr0076670 1 2 9 215 3L 8351826 8351846 GGTGACAAACACTATCGTCTC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 2 3 9 267 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350939 8350957 AAATGATGCGGGTCATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 3 3 9 268 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350938 8350957 CAAATGATGCGGGTCATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 2 2 2 66 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529281 8529299 TAGAACTCCTCCCAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 1 2 2 61 3L 8670531 8670551 ACTCAAGACTCTGATTCTGGA 58 8670711 8670729 TTTCCAATTTGGAGTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 3 5 7 113 3L 8902025 8902096 GGAGTGGTTAGTTTGCCAG 58 8901930 8901948 ATTGGGTATGAGAGCTGCA 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 3 5 5 126 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100465 9100727 GTGGGTACATTCATTGGCAC 59 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 1 2 2 81 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677485 9677505 AAGAGATACGAGACACTCTCG 58 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 1 2 2 89 3L 9723674 9723692 CATGGCCATCATTGCTGTC 59 9723837 9723855 TCCTTCCACTCAGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 3 3 8 184 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824112 TATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076312 2 1 2 104 3L 10092787 10092806 ACTTATTTGGCCGAACTCCT 59 10091119 10092720 CAAACTTATCGTTCGCCGA 58 NA Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 2 3 3 102 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143509 10143527 ATCCGCATCGTAAATGAGC 58 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 1 3 3 80 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188026 10188044 TCGCCGATAATGTCATCGT 59 NA Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 1 1 1 77 3L 10209374 10209393 ACATGAAGTTCTGTTTCGCA 58 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0076235 1 1 2 80 3L 11087696 11087717 CCAATCAGATGCTTAAGAATCC 57 11087445 11087655 CATCCATGGTGATCCTCTG 57 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 2 2 2 101 3L 11438750 11438769 TCAGGAGACTTGTATGTGCA 58 11438896 11438914 CTGATTCAGAACCACCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 1 3 3 80 3L 11622539 11622558 GTGACGTTCAAGACGTACAG 59 11622598 11622695 TTTACTGATGATGTCCTTGACG 58 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 2 3 4 88 3L 11992086 11993380 TGCGTGAGATGTTCTTCGA 59 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 3 3 5 135 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005706 12005725 GTGATTGCTCACGTTCTTCC 59 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 2 3 3 80 3L 12737069 12737148 TTTACAACTGGTGTCATGAGC 58 12737189 12737208 TTCTCTGTACTGTCCATCCG 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075923 2 1 2 74 3L 12774583 12774602 TTAAGGAGGTGCATAAGCTG 57 12774696 12774714 GGAACAAGATCGCTCACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 2 2 2 80 3L 13432678 13432759 TAAGTCGGACTGTCAGATCC 58 13432617 13432637 ATTCCTACAGTAGTAACGGGT 58 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 2 3 4 174 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127,FBtr0290126 3 3 4 82 3L 13865947 13866029 ATCATCAGGAGGTTGCTCG 59 13865883 13865903 TGCTTCGACAACTAAGAAGGT 59 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 3 4 4 87 3L 13903644 13903662 AGAGCACGAGAAGAATGCA 59 13903307 13903593 ATCTGAGTCATTGCTGGCT 59 NA Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 3 3 3 114 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033097 14033179 CCGGCTTGTTAAAGACCTG 58 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619 3 1 2 162 3L 14592037 14593037 AAGGACAGATGACCGATCC 58 14591893 14591912 AAGTTAAAGGCGGAATTGGC 59 NA Drosophila melanogaster 61 CG34245 FBgn0085274 FBtr0302580 1 1 1 60 3L 14887223 14887242 CAAGCCTTCGTTGTGTAACC 59 14887059 14887078 ACCTCTTCGCATCCATATCG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 2 4 4 81 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593967 15594347 CCAAAGAATGTTGCAATGCG 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 1 3 5 80 3L 15857119 15857138 TATATTGGTGACGTCGTCCT 58 15853117 15857076 GTTGTCACGCCTATCATCG 58 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 2 3 6 88 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109335 16110657 TGTTGGTCATAGAAGCTGCA 59 NA Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653 1 1 2 121 3L 16496621 16497431 TCACATCCAGGTGACACAG 59 16496518 16496537 TGCCCTTGAGAAAGTAGGTG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 3 3 10 116 3L 16928314 16928332 TATTCACCAGAACCTCGCG 59 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA InUTR Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 2 4 4 80 3L 17008138 17008157 ATACCTTCAAGACCAAGTGC 57 17007995 17008097 CTTTGGCTTGAATGATGACTG 57 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 1 2 2 82 3L 17746409 17746576 TGTTCCCACGCTATATGAC 57 17746345 17746363 ACTTCTCCAAGGTTTCCAC 57 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075008 3 1 12 81 3L 19297391 19297475 ATCACGATGATTGCCTACCT 59 19297329 19297349 ACAACAGCATAATCCCTTTCC 58 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0300340,FBtr0075003 1 2 12 86 3L 19292796 19292814 CAAGGAGTTACCGTGGAGG 59 19292641 19292746 GTTGAAGGGTGTGCATTCG 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301604,FBtr0301606,FBtr0301607 1 4 5 105 3L 19794620 19794638 GAGATCTCTGCGAAATCGT 57 19794704 19794782 CAAGATGTTAGGTTGATCTTGG 57 NA InUTR Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 3 2 6 87 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851538 19851557 CAGAGTCCCAAATTCTTGCC 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 2 4 4 81 3L 20254920 20254939 GTTTCCCAACAAGTTACGGT 58 20254982 20255058 GAAGACCGTTCTTATGCAGC 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 3 6 6 84 3L 20344338 20344433 GAAATTTCTCAGGATACTGGCA 58 20344477 20344496 TGAGAGTCTCTACAGAGCCA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 3 2 18 187 3L 20812391 20812409 ATGATCACGAACATCGGCT 59 20812560 20825954 GACTTGTTCTTCGCGTTCC 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 3 3 3 81 3L 21257016 21257035 ATCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600 2 2 3 80 3L 21565366 21565387 TATATGCTGCAACATGAGACTC 58 21565428 21565502 TTGGAAGTCTCTGGTTGCT 58 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0301160 2 1 3 157 3L 21612703 21612777 ATACTTCCCACTCCGATGG 58 21612898 21612916 GTCAAGTGATGCTCCATCC 58 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 1 3 3 80 3L 21830926 21830944 GAGACCATGAAACTGGTGC 58 21830811 21830882 CTTGACGAAATCCTCGTCC 58 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 1 4 4 87 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 3 3 3 144 3L 22870965 22871046 ATTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 3 2 2 81 3L 23087936 23088014 AGCTGATAGGCTTCAAACTG 58 23087874 23087893 GGGTTGACCAATACGAACTC 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 2 5 5 128 3R 66128 66146 AGCAAGAGGACTTGGACTC 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0100500 3 1 21 214 3R 117956 117976 ACTAACGCTGTCACTCTTACC 59 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 3 3 4 107 3R 151086 151105 TTCTGACCAGATCAATCCGG 59 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 2 3 3 123 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464551 464749 TTGCAACAGATCTTCTACGTG 58 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 3 3 3 124 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464550 464749 CTTGCAACAGATCTTCTACGTG 59 NA Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 2 1 1 70 3R 758291 758312 CCACCAATATCAAGTTCAAGAG 57 758481 758500 ACCTACGCTCTGATATCACC 58 NA DesignNoJunction Drosophila melanogaster 61 cno FBgn0259212 FBtr0299710,FBtr0300525 3 2 3 81 3R 1008597 1009507 GTGTGCTAGATATCGAGCGT 59 1008535 1008555 CAGGAACATGGTTAGCTTGTG 59 NA Drosophila melanogaster 61 CG2519 FBgn0037336 FBtr0078761,FBtr0078762 1 2 2 80 3R 1369137 1369156 CACGTCTAATCGAGTTGTGG 58 1369006 1369096 TTCCAATAAAGCCCGTATCTG 58 NA Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730 3 1 2 159 3R 1484426 1485274 GCTGGCGATAAATTAATGATGC 58 1484288 1484306 AACTGGCACTGTCGATCTC 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 2 5 5 117 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216706 2216724 TGGAACTGGTGATTCTGCA 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 2 4 11 87 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 2 6 11 80 3R 2724256 2734249 TTGGTAAGTGTCAAGAACGC 58 2724195 2724216 AGTGAAACTCCTTCTCTAGCTC 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 2 3 4 89 3R 3586916 3586934 CAACACGCAAAGTAGTTGG 57 3586987 3587737 TCCTACAACTTCCTTGTGC 57 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0081908 2 2 4 60 3R 4547248 4547266 CTCAAGCCATCTCCATGGA 59 4547351 4547372 CTAGACATTGAACGTCCAAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 3 4 4 113 3R 4547248 4547266 CTCAAGCCATCTCCATGGA 59 4547409 4547427 GGAGTCGAATGTCTCCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 2 2 4 130 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607991 4608009 TTGCTTTGGAGACTCACCT 58 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 3 2 4 149 3R 4766777 4766795 TCAAGAAGGTTGGTCTGGG 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 1 3 3 99 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830303 4830322 CCGGTGAGAGTTTAATTCCC 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 3 2 2 80 3R 5158579 5158661 AAACAGCTATATGCCCTTTCG 58 5158519 5158538 GAGGTATAGCTCACCCTTCC 59 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 1 2 2 121 3R 5192793 5192813 CAGTGGCTATCCTAAGATTGG 58 5192895 5192978 CACCACAACTTTCTTTCCCT 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 3 3 5 81 3R 5701880 5701898 GATGTCGTCAAACACGACG 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 1 3 7 103 3R 6692326 6692344 GAGACCAAGTACGACTCGG 59 6689538 6692261 CGTATACGTTCTGGTATGCTG 58 NA Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 2 1 1 75 3R 6995716 6995737 TTCAGAGATGTGTTTATCCCAG 58 6995590 6995608 AATTCATTGGTCCGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 3 1 1 124 3R 7000917 7000935 ATACAAGCACTGCATGCAC 59 7000580 7000600 TTTCCTCCCACTTATTGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 3 2 2 283 3R 7041669 7041687 CTAAGAAGGACGCGAAGTC 58 7041336 7041422 CTTGATCAGACCCTTCTCG 57 NA DesignRelaxed Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 2 2 3 101 3R 7202932 7203772 CTCCTACTTCTTCTACATTGACAC 58 7203831 7203850 GGAAGTACATCTTGAGCACC 58 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 2 2 6 89 3R 7419480 7429873 CAAAGAAGAGGGTGCTGAG 58 7419409 7419427 GATTCTTCACGTTCCTGGG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 1 6 6 80 3R 9204503 9204740 TTGCCCTACATCTACAATCC 57 9204442 9204461 GTCCAGTTCACTTACATCGT 57 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 1 4 6 134 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9203264 9203282 CTCAACCAGTTCTTCCACG 58 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 1 5 5 135 3R 9476212 9476541 CAAGGGTGACTTTGAGCAG 58 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 1 3 5 80 3R 9582734 9582909 TATCCATGATGTGCAGAATCG 58 9582950 9582969 TTCAAGTAGTCCAAACGCTG 58 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0301845 2 1 2 179 3R 11051629 11051702 CGATAATGCGGAATCCTTCG 59 11051844 11051862 GAGTAGTCCTTGCCATCCT 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216,FBtr0083215,FBtr0100595 3 3 3 80 3R 11827977 11827996 GTTCATTGGTGACCAATTGC 58 11828036 11828140 GTGGTTTCATATCGTCATTGAC 57 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 3 1 1 101 3R 11849428 11849447 AATCCGAATCAGACCTGGTC 59 11849839 11849857 GTCTGGTTTCGATTGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083231 2 1 6 95 3R 11895059 11895593 CAGCCCGAGAATAACAGTG 58 11894982 11895000 TTTGTGTCCGGTTTGTTGG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0300242,FBtr0083535,FBtr0083537 2 5 7 60 3R 13834720 13835676 CACTCACTGGACATTTGGG 58 13835700 13835718 GGATGATGCCATAACTCCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 2 4 7 114 3R 13997412 14001059 TCCGCTAAACGAGAAGACC 59 14001137 14001155 CTTGAACTTGAGGTCGCTG 58 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611 2 1 3 189 3R 14022833 14024432 ACAACAAAGTGGTTGTGCA 58 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 3 2 2 80 3R 14419606 14419627 TTACTGTGATCTCAATGGAGGA 58 14419480 14419566 TCGCAAGTTAAGGCAATCTG 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368 3 1 2 139 3R 14555950 14556056 CGCGAAAGAAGGATCATCTC 58 14556158 14556176 GCCGGTGACCTCTATACTG 59 NA Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 2 2 2 140 3R 15137649 15137669 ATCTCAACTACTACGGATCCG 58 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 1 2 3 99 3R 15676653 15676674 TGACAAGGACGAATTTCTAGTG 58 15676846 15677565 AATGCGCTCCATAATTCGC 59 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083842 3 1 2 103 3R 15845466 15846015 TAAACGAAAGCAACTTCGAGC 59 15845383 15845404 ATTCATCAGCACGATATTGGAC 59 NA Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 3 2 2 155 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865316 15865335 GCGTTGATATAGTACTCCCG 57 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 1 5 8 142 3R 16146164 16147206 AACGATCACGATTTGGACG 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 1 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 2 2 8 80 3R 16576466 16580695 GCTATGCTCATTCGATGGG 58 16580738 16580757 CGTCCGATAGTCGATAATGG 57 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089515 1 1 9 80 3R 16796691 16798904 GAACCGCAGGTTGATTTCG 59 16798945 16798966 ATGACGAAGTACACAAAGAAGC 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 1 2 4 105 3R 16894645 16894663 GATCCGCATCATTGTCAGC 59 16894732 16896454 GAGGTCGTCCTTGATCCAG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 1 5 16 163 3R 17004778 17004798 TTATGAACTCCATGAAGGTGG 57 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084066 3 1 22 88 3R 17180807 17200795 CACAGAGGCTCAAGAACTG 58 17180737 17180757 GGTTCTTAACGAACTTCTCGT 58 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 2 4 4 86 3R 17404341 17404359 AATGAGAGCTGCATCTCCT 58 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 2 2 2 81 3R 17604913 17605282 ATCTATAGGAATCTGAGTGGCC 59 17604853 17604872 ACTCCATGTGAAAGTCTCCA 58 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 2 2 3 81 3R 18209068 18209140 TTATGCAACACGAATTTCCG 57 18209184 18209202 GCCTCTATCATCAGTTCCG 57 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0301859 2 2 3 122 3R 19343883 19343901 CACATGAAGGAGTGGAAGC 58 19341197 19343798 GAAATTGCGAGATCCTTTGG 57 NA Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 1 1 1 72 3R 19364211 19364229 TACGTCACATACGAGTGCC 59 19364097 19364115 GCGTCAAAGAATTGGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0113392 2 2 5 124 3R 19799264 19799879 GACTACTCGTGTCCCAGTC 59 19799967 19799985 TGTTTCGATTGCTCAAGCC 59 NA Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 3 2 2 81 3R 19822358 19822380 CCGATTGAGTTTAGATGAGAAGG 59 19822420 19822499 CTGATCAAAGGCGTGAAGAC 59 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 3 6 6 124 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386432 20386450 GTCATGTCATTGATGGTGC 57 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084667 3 2 3 82 3R 20475260 20475376 CCTGGAGCTCTATGAGGTG 59 20475196 20475214 TGAAGGTGGTCTCGATCTC 58 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666 3 2 3 81 3R 20464510 20464529 TCCTACACCAGTAGTCTGGA 59 20464381 20464466 CCTCCTCATTGTCCACGAG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100631 1 1 18 110 3R 20525141 20528754 GCGTGCAAGTGATATCACTC 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 2 3 3 62 3R 20877260 20877278 CTACAATTGCCTGAGTCCG 58 20878228 20878248 CGAAATCCCTTAAAGCTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 1 2 2 91 3R 20890640 20890658 AATAATACCTGGAGGCGTG 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089982 3 1 6 96 3R 21174051 21177847 AGTGCTTAGAGTGCAATGAC 58 21173974 21173992 TCTGCTTGGAACTTGTCCA 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 3 5 5 61 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451841 21451860 TTATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 1 3 3 84 3R 21511212 21511297 ACTATTTGGATCACCCAGCT 58 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 2 1 1 82 3R 21614184 21614202 TTTCACCTGGAGTCAGAGC 59 21613996 21614014 TCATCGGTGTTTAGCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 3 1 1 60 3R 22772343 22772362 ATTGAATCACTTATGCGCAC 57 22772439 22772457 ACTCGGACTTATCTCCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 1 1 1 190 3R 22851771 22851789 GCAATCTTTGCTCTAGCCG 59 22851529 22851547 TAGAAGTTCACGGGAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137 2 1 12 99 3R 22892597 22892852 CTCTTTAATACGTCCGCGG 58 22892516 22892537 TCGGAGATTGATTCTGATTCTG 58 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 3 2 3 86 3R 23058251 23058269 GACACGATAGTCTCACTGC 57 23057910 23058201 ATCTTCACATTCCTGCAGC 58 NA Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 2 1 2 95 3R 23484259 23484277 GTGAGAGCTTGGATGACGA 59 23483827 23484200 GGACGAACTGAGAGTAGGG 58 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 2 5 5 127 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529568 23529643 TAATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299747 1 1 13 80 3R 24743934 24745224 CGACCTTTACAGCAAAGCC 59 24745267 24745286 TGTGATGGAGAATGTCTCCG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 2 4 13 135 3R 24714130 24714148 GCTAACGCAACTCTTGAGC 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 1 2 4 89 3R 24941220 24941300 CAAGAAGGGTATTGAGGCTG 58 24941352 24941370 TGGGTCTTTCGTACAGAGG 58 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 3 3 3 87 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975352 24975370 CTTGAAGTTCTCGTCCAGC 58 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 1 3 4 113 3R 25142077 25142449 GTGAATCGGACTCATTCGT 57 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 1 3 5 103 3R 25309373 25309391 ATTTGAACCTGCTGAAGCG 59 25309458 25309689 TAGAGGAGCGACATTGCTG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085444 3 1 5 90 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423191 25430247 ATGAGATTCCATTGCCTTCAC 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 3 3 3 80 3R 26184096 26184114 GCTATCCACTGGTTGATGG 58 26184157 26185710 GTCCCTCGTATTTAACCTCG 57 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 3 4 5 135 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211856 26211874 GTTGTAGGGCTTGTTCTCG 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 3 4 13 197 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421161 26421181 TGATCTCCACAATAGTCTCCC 58 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 3 3 3 81 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028839 AGAGTGTAGTAGTGCTTTCCAC 59 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 2 3 3 80 3R 27398816 27398834 TCCAAGTTGGTCAACAAGC 58 27398876 27398993 CTTACAGGCAATGCGTATCAG 59 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 1 4 4 114 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567645 TTGAGCACAATCACCTGAG 57 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 1 3 3 107 4 231104 231195 TAGGAACAGCTGGTACTTTGG 59 231261 231282 GCTATCGAGTTACTATCACGGA 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 2 6 6 80 4 302506 302581 TATGTCAGGTTGACTTTGCTG 58 302446 302466 GAAGTTCTCCGCATTTATCCT 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 2 5 6 199 4 323146 325653 TTATAGTCTTCGGGCTGCT 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 2 7 7 108 4 471122 471820 ATCGTGATCTTAAGCCGGA 58 471890 471910 GCCATAATTCCAGAATCCTCC 58 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0289951,FBtr0089243,FBtr0112904 3 3 3 80 4 939580 939599 ATACTTGGCATGTGCAAACC 59 939393 939539 AAAGTTTAGACAGGCCTTCCA 59 NA Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 1 2 2 87 U 1911199 1911217 GACCGTAATCCAGAAAGCC 58 1911267 1937081 CCATGAAGCACTTTGGAGTC 59 NA Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 1 1 1 147 U 7799023 7799044 TTGGTCAGTTCCTATAAAGGTC 57 7799213 7799231 AAACGGTACCAAGTGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 1 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 3 3 3 156 X 927432 935032 AATATGAGTATCCTCCGAGCAC 59 935149 935167 GTTTCGCACATTGTAGGGC 59 NA InUTR Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 3 2 6 173 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387281 1395833 GTGTGCTTAGAATTGCCGT 58 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362 1 1 2 80 X 1783441 1783461 GATCATAGTGTGCAACTTCGG 59 1783318 1783400 CTGGTAAAGGTCTGCTTGTC 58 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089990 3 1 5 90 X 1788603 1788621 ATAGAGCTGACCAACTCGC 59 1786143 1788554 GTATCATATCCTGTAGATCGGGAC 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 1 4 5 87 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 1 2 2 109 X 1948465 1948546 AACCCATGGAAAGAACCCT 58 1948617 1948637 AGGATGCATTTGAGGTATTGC 59 NA InUTR Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070502 3 1 2 122 X 2590287 2590368 GATATCCTAGACAAGGCGCT 59 2590184 2590202 CTCCAGTTTCACCGATGAC 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0112680 3 1 8 87 X 3641434 3643084 ACTTGTGTCCTCATCAATTCAG 58 3656533 3656553 AAATGTTGTTGATAGCTGGGC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 2 3 4 81 X 3846006 3846024 GGTGCCAATACTAGCTCAG 57 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 2 2 5 84 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247639 4247988 ATCTAGCCAGATCTTGGCTG 59 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 3 3 3 131 X 4554210 4554300 ACACAGATCGTGGTGATATCC 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706,FBtr0070707,FBtr0070705,FBtr0070704 1 4 4 184 X 4585719 4585738 CAGTGAAGTTGTAAGCACAC 57 4592337 4592355 TCCTTCTTGATGTAGGCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070724,FBtr0301796,FBtr0301793 2 4 6 118 X 4847640 4848153 ACGATGGCTACGAAGTGAC 59 4848235 4848253 GGTCATTAAATCCGCGTCC 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589 1 4 5 81 X 5123366 5123386 GGATCATTCCTGAATCTGACC 58 5123429 5127484 GATCCAGCAGCTGTTTGAG 58 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 2 4 4 80 X 5317775 5317861 CGGAGAAGAATTCATCTTACCTG 59 5317901 5317919 GTACCCTTGATCATCGGCA 59 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 1 3 4 91 X 5794984 5795002 AGACACCAAACCGAAAGAC 58 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953 2 1 2 94 X 6009595 6012161 CAGTATTCCAAATACTGACGCA 58 6009522 6009540 TGCCACAAAGTACAATGCG 59 NA Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 3 3 3 120 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649217 AAGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091673 2 2 3 60 X 6771077 6771096 TGTTACCTTTACCAAACCCA 57 6771119 6771137 TATTTCAGCTCCCGAACCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301240 3 1 2 153 X 7111913 7126406 GAGGAACCAATTCCGACTC 58 7126523 7126541 CACTGGCCATAGTTCTCCT 58 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 2 4 6 88 X 8478536 8478554 TACTCGGAGATCCAGTCGA 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219 2 1 3 106 X 8491652 8491670 GAAGAGTATGCACCGTTCG 58 8491739 8492117 GTGAATAACGTCCGAACGTG 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271 1 1 10 153 X 8770775 8771057 CTATTTGGCTTCTAAATGTGCG 58 8770643 8770661 GAGTCGGTGTACTGGAGTC 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 1 2 6 92 X 8917821 8918118 GGATTCAGCCCTATACTGGA 58 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 1 3 5 80 X 8992442 8994560 AGCGCATCCATCTAGATCAG 59 8992381 8992402 CATTGATGTAGCCCGATTTGAG 59 NA Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 3 1 1 65 X 9103493 9103511 GAAGAAGAGCTTCACCTGC 58 9101085 9101104 GAGATGAAGGCACCTTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 2 2 2 60 X 9481077 9481095 GCCATACTCAATGACACCA 57 9481118 9481137 TGCAGTTGTGATTCTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 1 2 2 92 X 10644116 10644196 GTCAAGATCCAACTCAAGCC 59 10644043 10644061 CTCCTCGTTGTAGATGGGA 58 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 1 2 3 80 X 11494347 11498352 GATATTTGACAAGCACGACTC 57 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 2 3 3 81 X 13221563 13221581 CATGCACGATCTGCTTAGG 58 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 3 5 10 107 X 13493487 13494115 ATGAAGAGTACACCAGCTCC 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 1 2 2 103 X 14944078 14944097 TGAGCTAATGAAGCCTTTCG 58 14944161 14944242 TCTTAAAGGCTTGACTCTCGA 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299949 3 1 3 120 X 15990580 15990599 TTGACTACGCTATTTGTCGA 57 15989643 15989661 CTCACTTAAATTGGGCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069 2 1 3 129 X 16326624 16326642 GAATACATCGTGAATGCGG 57 16326735 16327206 CTTCATCATCGAGTGTCCC 57 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 2 7 7 60 X 16579563 16579581 TGATATCCACGCACATGCA 59 16579425 16579443 AAGTTCTCGTAGTGCACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074385,FBtr0290020,FBtr0074384 3 3 3 84 X 16997666 16997684 TATCCCATTACCTCGCAGG 58 16997891 16997909 GATTGAGCTTGGGAACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302837 1 1 5 98 X 17614644 17614662 TGATCAAGACGCTTCCCTG 59 17614722 17614990 CCGGGAATATCGAAATCTCCT 59 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300971 3 1 6 80 X 17785899 17785918 GCAAGTCGAGATCAATACGA 57 17785958 17786496 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 1 2 6 80 X 17785900 17785922 CAAGTCGAGATCAATACGATAGC 59 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 3 5 6 85 X 18286925 18301831 AGAGTGTTTGTGAACAGATCG 58 18286786 18286878 GACTTGTACTCTGCCAAGG 57 NA Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 3 2 2 95 X 18374637 18374655 CCTGTCTCTACACGGATCG 59 18374503 18374578 TTGATACGGCACGATTGGT 59 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 2 2 2 88 X 19020449 19020467 TGCTCTACCCGTATTCACC 58 19020312 19020400 CATGTATGACTCGTTCTTCTGG 59 NA InUTR Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 2 2 2 60 X 19173016 19173036 GTCTACCTATTTGAGCTGGGA 59 19171980 19171999 CTCCAATGGCGATAATGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 1 2 2 80 X 19177437 19177456 CGTACCACAATCAAGAAGCG 59 19177213 19177396 TTGCTCAGCCATAATTGAACG 59 NA Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082,FBtr0074784 2 2 2 84 X 19382828 19382846 TCACGGATCCGTATTACGG 59 19382709 19382781 ATGATGCTGACTTGAATCCG 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 1 2 5 81 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455758 19455779 TGGGTAAATTCCAGATCAAAGC 59 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0299591 3 1 3 82 X 21004485 21004850 TGCAATGCCCACTAAATACTG 59 21004894 21004912 TGATGGTGTTCCAGGTGAG 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 2 2 9 97 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499694 21499713 ATAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 3 4 4 97 XHet 9417 9492 GAGCTGGCATGACAATACC 58 9551 9571 GTCGTGCATAACACAAATGAG 58 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 2 4 4 89 XHet 12050 12365 GGATGATAACGATAATCGGAGAC 58 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 3 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 snmRNA:430:CR33741 FBgn0053741 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 let-7 FBgn0260473 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:50C FBgn0011896 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:60C FBgn0053537 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-184S FBgn0067725 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-311 FBgn0067693 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:838 FBgn0065081 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:P:3E FBgn0025118 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 ric8b FBgn0030117 FBtr0071318 3 1 1 71 X 9155207 9155225 GTTAGTCAACGACCTGAGG 57 9155256 9155278 GATTGCCTTGAGTATAAGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U2:14B FBgn0003920 FBtr0074208 1 1 1 60 X 16148770 16148789 TAGTTCCTCCATTGGAGGAC 58 16148812 16148830 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0077353 2 1 5 80 X 21887461 21888901 TGCTTCAACAGAACAGCTG 58 21888944 21888963 CTAGAAAGCTCCGCAATGTC 59 NA InUTR Drosophila melanogaster 61 CG1518 FBgn0031149 FBtr0077264 1 1 1 96 X 20923816 20923932 AGATACACAGCACTGGAGC 59 20923738 20923756 TCATTGTCGTACGATCCCG 59 NA Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 1 1 1 60 X 20911185 20911428 TCAAGTTTCTCGAACTGGG 57 20911143 20911162 TTGAAGCTGTAGAAGTGGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Obp19b FBgn0031110 FBtr0077302 3 1 1 168 X 20287801 20287822 GTTGAAGATGACGAACCTTCTG 59 20287951 20288034 CTCGACGATGTTCTCCCTC 59 NA Drosophila melanogaster 61 inx6 FBgn0027107 FBtr0077339 1 1 1 120 X 20139766 20139859 ATGTGTTCATCAGCATCCTC 58 20139665 20139683 ATCAGGTTCCAGAGGTTCC 58 NA Drosophila melanogaster 61 CG17003 FBgn0031082 FBtr0070035 1 1 1 60 X 19895602 19895620 TTTATGTACACGAGAGCCG 57 19895560 19895578 AGCATCCATTCGAATAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074811 2 1 2 74 X 19636918 19637490 GACATCGCAAACAAATCATCAC 59 19636865 19636883 GATCCCGCTGATAGTAGGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 e(y)3 FBgn0087008 FBtr0074762 1 1 1 101 X 19524170 19524277 AACAAGTCCCGTAAGGATGAG 59 19524089 19524107 CTCTAGGCGTGTACAGGTG 59 NA Drosophila melanogaster 61 CG14219 FBgn0031033 FBtr0074769 3 1 1 80 X 19482996 19483017 TACGGTCATGACTATATGGTGC 59 19482879 19482958 GTAGAATGAGTTGATCCACGTC 59 NA Drosophila melanogaster 61 CG15882 FBgn0030983 FBtr0074703 2 1 1 60 X 19018198 19018216 AATGATGTCGACATTGCCG 59 19018156 19018176 CTTCCTTCGAAACAGATTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14190 FBgn0030979 FBtr0074663 1 1 1 60 X 18959832 18959852 CATCAGGTGACCCAGTATCTC 59 18959872 18959892 GAGGCAAATGTGTTCTCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6873 FBgn0030951 FBtr0074607 3 1 1 60 X 18633530 18633550 GACTATGAGTATCAGCACCAG 57 18633490 18633509 TTAGCTTCTCCTTCAGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp308a1 FBgn0030949 FBtr0074604 2 1 1 80 X 18604036 18604056 TTGGTTGGGAATATGTTGGAC 58 18604095 18604176 CGGATTCCGAGTATAGATTTCC 58 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970,FBtr0300971,FBtr0300973,FBtr0300974,FBtr0300972,FBtr0300969 2 6 6 91 X 17784171 17784500 GACTCGTTGAATTTCGCCC 59 17784555 17784573 TTGATGATCGGCTGTAGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12998 FBgn0030829 FBtr0074394 1 1 1 76 X 17113273 17113291 GAAACTCTGGTTGGAGCAG 58 17113331 17113349 CCATCCACTATTGGAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 3 2 2 276 X 16534257 16534340 AAATACATGGACAAGCGCA 58 16533937 16533956 CTATGAATGTTACGGAGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 3 2 2 151 X 16483579 16483671 GAGATAGATCAGGCGCTGG 59 16483446 16483464 TTATTTCGGAATCGCACGC 59 NA Drosophila melanogaster 61 CG3560 FBgn0030733 FBtr0074216 2 1 1 60 X 16180631 16180714 GATTCAACCAATACGGTCTGC 59 16180735 16180754 TCCTTCACATCCTCGTTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 2 2 2 84 X 15651251 15651354 TATCTATACGACGTTCGAGCA 58 15651397 15651418 CTGAACTTCTTTAGCATGAGGG 59 NA Drosophila melanogaster 61 Tcp-1zeta FBgn0027329 FBtr0074086 2 1 1 84 X 15640866 15640884 CATCAATATCAGTGCCGCC 59 15640929 15641350 AGAAACCAACATCTTAACGGTG 59 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0100150,FBtr0073990 1 2 4 69 X 14725638 14725656 GATACGAAGTGGAGCTCGA 59 14725494 14725512 ATTCTCACCACACTTTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15890 FBgn0030576 FBtr0073939 2 1 1 85 X 14652486 14652504 TACATTGAGAGTCCTGCCA 58 14652358 14652443 GGTACATCCATAGGAATATGAAGAC 58 NA Drosophila melanogaster 61 Yp3 FBgn0004047 FBtr0073821 1 1 1 82 X 13654211 13654229 ACTACGACTACACCAGCAG 58 13654273 13654365 GTCAATGATGATCAAATCGCC 58 NA Drosophila melanogaster 61 CG2453 FBgn0030460 FBtr0073737 3 1 1 80 X 13087654 13087728 TGGATAAGGTTCTTTCTGAAGC 58 13087595 13087614 TCGTCAGATGACTGAACTCC 59 NA Drosophila melanogaster 61 Fer3HCH FBgn0030449 FBtr0073745 2 1 1 65 X 13002025 13002046 AAACGATCAGATCAACATGGAG 58 13001919 13001999 TCGAAATGGTAGGCCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4661 FBgn0030429 FBtr0073699 3 1 1 60 X 12750101 12750120 CTGGCGTCTCATTATTTGGG 59 12750060 12750080 CACAGAAATGATGAATGGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 3 1 1 108 X 12271421 12271439 CAGAACTCAGTGTCCTGCT 59 12271222 12271349 AAGATGAAGACCTGGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 tsg FBgn0003865 FBtr0073582 1 1 1 60 X 11882700 11882718 CAAGCACAAGGATGTCCTG 58 11882658 11882678 TCCTTCAATGTCTCCAATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15738 FBgn0030352 FBtr0073572 3 1 1 90 X 11787380 11787632 CAACTTCCTGCTAACCCAC 58 11787686 11787704 TCAGAACCGATTAAGCAGC 58 NA Drosophila melanogaster 61 inaF-C FBgn0085350 FBtr0112523 3 1 1 216 X 11625326 11625347 ATTCTTTCTGTCCATCTACCAC 58 11621345 11621363 TTCCGATGAGTTCAGGAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2533 FBgn0030319 FBtr0073537 3 1 1 161 X 11497920 11498121 CCGATTACAATTGGATTCAACC 58 11497780 11497798 AGAGAACCAGTACGGTCAC 58 NA InUTR Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0300872,FBtr0073513 1 2 2 124 X 11471083 11471103 AGCTAATTGAGAAACACCTGC 59 11471255 11471273 TTTCTTCATCACCATGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Gr10b FBgn0030297 FBtr0073550 3 1 1 80 X 11307034 11307055 TACCTCTACTATAGATACGCCA 57 11306915 11306993 TGTGGACACCTGATTTACG 57 NA Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 2 1 1 73 X 10733432 10733452 TGCTCAAAGGATTTGGATGAC 59 10733487 10733562 ATTGTTGATGTGGTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 1 1 1 73 X 10733433 10733452 GCTCAAAGGATTTGGATGAC 57 10733488 10733563 GATTGTTGATGTGGTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 2 4 4 117 X 10676326 10676423 AGTACAAGCAGGTCTTCCT 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 CG2889 FBgn0030206 FBtr0071450 3 1 1 81 X 10369103 10369122 TCTTTGAGACGGACGATACG 59 10369166 10369245 TCTGGTAGGATCTCCAGCT 59 NA Drosophila melanogaster 61 CG32683 FBgn0052683 FBtr0071463 3 1 1 124 X 10346283 10346301 CATCGGGATCAGCAATTGG 59 10321538 10346195 ACGATGAGTGGATCTGTCG 59 NA Drosophila melanogaster 61 CG12641 FBgn0030193 FBtr0071443 1 1 1 192 X 10241456 10241474 CAAATCGCATTCCCTGGAC 59 10241630 10241648 CTGTAGACACTGTCGGAGG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0071416,FBtr0112972 3 2 2 82 X 9925205 9925223 CGGTTAACCATCATGCTCC 58 9925264 9925353 GGAGTAGTCAATATTTAACTCGGC 59 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 2 2 2 162 X 9873643 9873809 ACTTTCTGAGGCTCATGAC 57 9873382 9873400 TTTCGGTTTACCTTTGGCT 57 NA Drosophila melanogaster 61 ric8a FBgn0028292 FBtr0071317 1 1 1 80 X 9150342 9150360 CACCTGAAACGACTAGAGG 57 9150404 9150487 CAGATCCGCATTCTTTGTG 57 NA Drosophila melanogaster 61 CG6999 FBgn0030085 FBtr0071288 1 1 1 80 X 8982732 8982753 CTGAAGGAAATCATGAACTTGC 58 8982791 8982885 CTTTGTCTTGAAACTTGACAGC 58 NA Nonspecific Drosophila melanogaster 61 CG12659 FBgn0040929 FBtr0071229 2 1 1 107 X 8485666 8485687 CGTTTACCTTTCCAAAGAACTG 58 8485521 8485598 CATTGAGCGTGAAGTAGGT 57 NA Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 2 3 3 81 X 8333722 8333742 AAAGAAATGCTTTCCCGAGAG 59 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 1 2 2 80 X 8318278 8318298 CGAAGAAGTTGAGAAGAACGA 58 8318337 8318418 CTTAAGCGATCACTAGAATTGC 57 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 1 6 7 98 X 8131886 8131904 CTACCACTTCATCACGCGA 59 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 CG18262 FBgn0030012 FBtr0071158 3 1 1 60 X 8048135 8048153 ATCGCATACCAATTTGCGG 59 8048177 8048195 CTTCCGTTGAAACGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15336 FBgn0030009 FBtr0301688 3 1 1 60 X 8042077 8042097 CGATAATCGGCGACTTATGTG 59 8042118 8042137 CAGATTCCAATAGATGCGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071130 3 1 2 80 X 7838003 7838022 TCAATCACTACGAATGGTCG 57 7837872 7837960 CAAAGGTGTCCTTGTAGGC 58 NA Drosophila melanogaster 61 CG32719 FBgn0052719 FBtr0071083 3 1 1 102 X 7405678 7405759 TGAAGAAGATCTAAACGAACCC 58 7405597 7405615 TGTTTGGAATGAGTTGGCC 58 NA Drosophila melanogaster 61 CG1999 FBgn0029947 FBtr0071054 3 1 1 105 X 7252977 7253172 GTGTATATCTAGAATCATGCAGCG 59 7253235 7253254 AGTCCTTCGAAGGTCAATCC 59 NA InUTR Drosophila melanogaster 61 brk FBgn0024250 FBtr0071048 1 1 1 60 X 7202687 7202708 GGAATGATAATGATTGCAAGGG 57 7202727 7202747 CGGTGAATGTTGTATTTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572 2 1 2 207 X 6973397 6975036 TCTTTGGTCTCGATAGCGA 58 6973208 6973226 TGCTGGTGGTAAAGTAGCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 3 2 2 80 X 6735770 6735869 TCCTTCAATGGTATCAAGTGTC 58 6735711 6735730 TAGGCACATGACTAAATGGC 58 NA Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070904 1 1 2 130 X 6235369 6236109 TCATACGGAATTCGACTAAAGC 58 6236199 6236218 GAATACTGTTCCTGGCACTG 58 NA InUTR Drosophila melanogaster 61 Rpt4 FBgn0028685 FBtr0070929 2 1 1 87 X 6184927 6184945 GAACGATCTAAAGGCCCTG 58 6184795 6184879 GGCCTTCACAATGAATTTATCC 58 NA Drosophila melanogaster 61 CG4660 FBgn0029839 FBtr0070886 1 1 1 170 X 5973505 5973652 ATTTCGCGGATTATTTACTGGG 59 5973356 5973374 GAATCCGTTGGAGGAGGTC 59 NA Drosophila melanogaster 61 Cpr5C FBgn0029811 FBtr0070815 3 1 1 83 X 5698768 5698849 CATTCAAGTTTGTGGCCCT 58 5698896 5698914 GAGCAGCATGGTACAACTG 58 NA Nonspecific Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221 1 1 2 75 X 5578110 5578128 TATTATCGCGATACGGAGC 57 5578238 5578256 TATTGGCCATTTGGTAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15784 FBgn0029766 FBtr0070777 3 1 1 60 X 5325571 5325589 CTATCTAGGCGCGACTGTC 59 5325613 5325631 CGTATCCGTATCCTGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15785 FBgn0040913 FBtr0070747 2 1 1 139 X 5199969 5199987 GTGCGAGATCAATTGCCTG 59 5200169 5200189 CATAGTTGAGACACTTGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 2 1 1 61 X 4543646 4543665 ATACATATTGCCGGTTTGCC 59 4543546 4543622 TTCATCTATTCTCGCCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG2901 FBgn0029679 FBtr0070605 3 1 1 81 X 3724422 3724445 CCTTTATCACAATCTGATGACTCC 59 3724482 3724727 GTTCCATATGAAGCGTCTAGTG 59 NA Drosophila melanogaster 61 CG32789 FBgn0260484 FBtr0070600 1 1 1 191 X 3693391 3693409 TTCGTGGAGAAGTTTGGTG 58 3693644 3693879 GATCACACCCTCCATGTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070586 1 1 2 80 X 3467445 3467463 AATTCCCTGCTAAATGCCG 58 3467319 3467403 ATTATCGGGCGTATTCTTCAG 58 NA Drosophila melanogaster 61 ng1 FBgn0002933 FBtr0070523 1 1 1 272 X 3136533 3136551 GATGATCCACGAGTCGGAG 59 3136787 3136805 CATTCATCGGATCTGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttm50 FBgn0250874 FBtr0070497 2 1 1 90 X 2624731 2624811 GCTTTCCTAAAGATAATTGCGC 58 2624662 2624680 ACTGGTTGATGGGATCGTC 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 2 3 3 107 X 2609221 2609239 AGCTCTGTAACTCCTCCGA 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 CG8636 FBgn0029629 FBtr0070446 3 1 1 124 X 2504327 2504345 AAATCCGCTTAACTCGTGG 58 2504158 2504176 CATAGTCGAGCTCCACCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3191 FBgn0023525 FBtr0070417 1 1 1 81 X 2144411 2144485 TGAGCATCGCGACTATCTG 59 2144348 2144367 AAATCTCCACGAACTCTCGT 59 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0070322 3 1 3 88 X 1870645 1880442 ACTACACAGTTCATAGAGGGA 57 1883792 1883812 AAGCACTCAAGTCTAGAACTC 57 NA InUTR Drosophila melanogaster 61 CG14810 FBgn0029589 FBtr0070374 3 1 1 81 X 1714144 1714226 CATCCATTTCGAAGAACAAGAG 57 1714084 1714102 TTCATCCCATTGGACTTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG11398 FBgn0040366 FBtr0070250 1 1 1 115 X 1109016 1109038 CCTTAAACACAGAAGAGCTACAG 59 1108773 1108791 CTCCCTGGTGAGGAATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3708 FBgn0040345 FBtr0070190 1 1 1 60 X 823427 823446 TGGAGAGCCTAATGGATGTG 59 823386 823406 TGAAAGATGACCATGTAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 3 2 2 84 X 712813 712891 CGATCCTAACTGTGTTCTGTG 58 712749 712767 CGTGTGCATAGAGGAAAGC 59 NA Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0273184 2 1 2 118 X 541601 541622 ACTGATGGTAACACTTCATCCT 59 541766 541784 AAGTCCATGATGTGGTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CR41617 FBgn0085823 FBtr0114281 1 1 1 60 U 9824704 9824722 CAATTGGAGGGCAAGTCTG 58 9824745 9824764 ATATACGCTATTGGAGCTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114112,FBtr0114111 2 3 4 84 U 1352854 1362604 GGCAACAAACGATATGCTC 57 1362649 1362670 CCTCATATCCGTCTATTTCCAG 58 NA Drosophila melanogaster 61 Arf102F FBgn0013749 FBtr0089192 3 1 1 81 4 1145314 1145401 TACAGAACATGCTCCAGGA 58 1145446 1145464 ATTGCATTCGGTAGGTCCT 58 NA Drosophila melanogaster 61 CG1970 FBgn0039909 FBtr0089105 2 1 1 80 4 589787 589808 GAATTCTATGAGCGAGTTTCTG 57 589671 589748 AAGAGGCATATCCAATGACAC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 tRNA:K5:84ABc FBgn0026163 FBtr0081661 1 1 1 60 3R 2646837 2646855 TAGCTCAGTCGGTAGAGCA 59 2646795 2646813 GAACAGGGACTTGAACCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085875 2 1 2 98 3R 27884857 27892058 CTCTACAGAACGACGAGGA 58 27884777 27884797 GATTAATACCTTCCGGTGGAG 58 NA Drosophila melanogaster 61 CG11576 FBgn0039882 FBtr0085852 3 1 1 172 3R 27635455 27635473 GACTCCGAATATGAGCAGG 57 27634139 27634157 TAAGGAACAAGCTCAGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kek6 FBgn0039862 FBtr0085821 2 1 1 279 3R 27484690 27484889 AGTCTGCTGGATTCTGCTG 59 27485132 27485150 TATGTACTGCACCTCGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 spn-F FBgn0086362 FBtr0085760 1 1 1 126 3R 27081682 27081768 AATCGCATAGCACTCAAGC 58 27081855 27081876 GTTGGCTCTCATAGTTCTTCAG 58 NA Drosophila melanogaster 61 CanA1 FBgn0010015 FBtr0085732 3 1 1 80 3R 26869126 26869146 GTCAACATCCTGAACATTTGC 58 26869188 26869453 TTTCTTGCGTAGCTCTTCC 57 NA Drosophila melanogaster 61 CG15545 FBgn0039806 FBtr0085719 2 1 1 80 3R 26697913 26697995 TGTGCTGGAATTTCTTTGCT 58 26697852 26697870 TCCGATAGTAGGATCGTGG 57 NA Drosophila melanogaster 61 CG31371 FBgn0051371 FBtr0302522 3 1 1 90 3R 26328529 26328609 ATTTAAGCTGGGCTCCTCC 59 26328457 26328476 AGATTCTAGCCAGAACCTGG 58 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 3 1 1 110 3R 26038055 26038131 AATCGAACGTGTTGGTCAG 58 26038203 26038223 GATAGTCATCGTGGTTAACCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Anp FBgn0000094 FBtr0085611 2 1 1 111 3R 26035714 26035732 ACTTTGTGGTCCTTGTCGT 59 26035869 26035887 GCAGCATTGTGTATTGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Sry-beta FBgn0003511 FBtr0085556 3 1 1 81 3R 25865599 25865671 TGATAGAAGGCTGCATTGTG 58 25865713 25865733 CGCTGGTTTATGATCTTCTCG 59 NA Drosophila melanogaster 61 CG14506 FBgn0039659 FBtr0085439 3 1 1 120 3R 25122787 25122805 ACCAGCTAGTGTCTATGGG 58 25122603 25122621 AATGAACATCAGGCGATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Sirt7 FBgn0039631 FBtr0085364 2 1 1 93 3R 24881949 24881967 GCAGTCTTACATAACGCGG 59 24882024 24882262 TATCATCGAGACCCTTCGC 59 NA Drosophila melanogaster 61 CG1951 FBgn0039623 FBtr0085342 2 1 1 103 3R 24853844 24854092 ATCTGTTCTCATTGGGCGT 59 24854158 24854177 CAGATCATTTGCGTAGCGAC 59 NA Drosophila melanogaster 61 CG1647 FBgn0039602 FBtr0085326 2 1 1 80 3R 24646371 24646389 GGAAATGTGCTATGCGACG 59 24646431 24646520 AGATCAATTAATCTTGCGGGC 59 NA Drosophila melanogaster 61 CG9997 FBgn0039597 FBtr0085314 1 1 1 60 3R 24582205 24582225 GATGTACGATGACGAAGTCCT 59 24582165 24582187 TTTAAGGTAGGTCTGGTTGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12879 FBgn0039540 FBtr0085218 1 1 1 94 3R 23520155 23520931 GGAAGAAGTGTGACCATAGC 58 23520987 23521006 GAGATCCCTAAGTTTGGAGC 57 NA Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 3 1 2 94 3R 23484258 23484276 TGAGAGCTTGGATGACGAG 59 23483827 23484200 GGACGAACTGAGAGTAGGG 58 NA Drosophila melanogaster 61 CG5880 FBgn0039489 FBtr0085108 2 1 1 80 3R 22943501 22943584 ACACATCATTCCAGTGACAC 58 22943626 22943645 ATGGGTGTTGGAAGATTGTG 58 NA Drosophila melanogaster 61 CG5447 FBgn0039427 FBtr0085012 1 1 1 136 3R 22278737 22278822 AGGGCATGATTGAAAGACAC 58 22278918 22278939 CATATAGATCAAGTAGGCCGTG 58 NA Drosophila melanogaster 61 CG14556 FBgn0039413 FBtr0273389 3 1 1 60 3R 21952582 21952603 AGGTCAGTTTCTCATATGATGG 57 21952622 21952642 TCTGAACGATCGAGAATATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm3 FBgn0002609 FBtr0084958 1 1 1 60 3R 21848092 21848110 GCAAACCGATGAGATTGGG 59 21848134 21848152 CAGCTCAATTAGTCGCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14545 FBgn0040602 FBtr0084913 1 1 1 187 3R 21676845 21676863 TTTCCCTCGACTTCTGGAG 58 21676607 21676625 AATCGATGATCAAACGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177,FBtr0084922 3 2 2 60 3R 21601232 21601254 GTACTATCAAATTTCCAGTCGCC 59 21601194 21601215 AATAAGCTGGCAGTTATTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10559 FBgn0039323 FBtr0289942 3 1 1 80 3R 21140577 21140663 ATATGGACGAGTTGGGTATCAC 59 21140518 21140539 GTCAGATTTGCATCTTCAGTCC 59 NA Drosophila melanogaster 61 CG11854 FBgn0039299 FBtr0084811 2 1 1 92 3R 21068289 21068307 GAGTCAGAGGACCCTACTC 57 21068363 21068443 CCTTTGTTCTAGTGAGGCG 58 NA Drosophila melanogaster 61 CG10420 FBgn0039296 FBtr0084870 2 1 1 130 3R 21061085 21061103 TAGTCATCCTTCTGGGCAG 58 21060910 21060991 AATAGCTTGACCTTCCGCA 59 NA Drosophila melanogaster 61 CG31510 FBgn0051510 FBtr0084783 2 1 1 114 3R 20948366 20948384 AGGAGAGGGATATCGAGCA 59 20946856 20948288 AGATATTGAGATGCGGCGA 59 NA InUTR Drosophila melanogaster 61 CG31109 FBgn0051109 FBtr0084791 3 1 1 90 3R 20879889 20880089 CTACCAATTACAATATCTCCGACTG 59 20879823 20879841 TCAGGAGCGAGTAATGCTG 59 NA Drosophila melanogaster 61 CG11781 FBgn0039259 FBtr0084797 3 1 1 126 3R 20850560 20850579 ATATCCGCCGTGGAATACTG 59 20850397 20850415 GAATCCAGAGCACGAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 Nmnat FBgn0039254 FBtr0084749,FBtr0084750 2 2 2 83 3R 20771733 20771751 TTGGTAGTTATCACCCGGG 58 20771795 20771874 AATGTTGCTCTGATACTTGGTC 58 NA Drosophila melanogaster 61 CG5807 FBgn0027539 FBtr0084739 1 1 1 80 3R 20632458 20632476 AGCTAATGCTGAACTGTGG 57 20632330 20632416 AGTTTGTGATGCCTATGATCC 58 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 3 1 1 60 3R 20544778 20544865 ATTCATGCTTTAGCAGCCG 59 20544736 20544755 ATGGATTGTAGGCTCCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13625 FBgn0039210 FBtr0084671 3 1 1 60 3R 20409463 20409483 GACACTAGATGGCAAGAAAGC 59 20409423 20409441 GTCGGTTTCCTTCTTCAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622,FBtr0084621,FBtr0113280 3 3 3 85 3R 20210140 20210160 CAGAAGAAGGATAATGCCGTC 58 20209977 20210093 AAGCCATGTCCATCCAGAG 59 NA Nonspecific Drosophila melanogaster 61 CG6432 FBgn0039184 FBtr0084606 1 1 1 80 3R 20164945 20165027 GCTACGACGTCAAGATCCT 59 20165069 20165089 GTGGTAGCTTAAGAGCAATCC 58 NA Drosophila melanogaster 61 CHORD FBgn0029503 FBtr0084554 2 1 1 80 3R 20013075 20013094 TCAACCTGGTATTTCCCGAG 59 20013134 20013213 CATTGCTCACATTCACAATTCC 58 NA Drosophila melanogaster 61 HP1c FBgn0039019 FBtr0084309 1 1 1 60 3R 18571803 18571821 AGAAGGATCCGCAAATGCT 59 18571845 18571863 ATGTGACGGGAGTAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31159 FBgn0051159 FBtr0084270 1 1 1 80 3R 18439834 18439910 GAATGATCACCGCATCAACC 59 18439953 18439971 ACGGCATACAGAGATTGCT 59 NA Drosophila melanogaster 61 CG5377 FBgn0038974 FBtr0084293 3 1 1 62 3R 18293268 18293286 TGGATCGCCTAGCAATCTG 59 18293224 18293244 TAAGAGCCTTGACTTCGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir94a FBgn0051164 FBtr0084193 3 1 1 60 3R 17940654 17940674 TGCGATATTTAGCCATCACCT 59 17940695 17940714 GATCATACCCGAATCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5791 FBgn0040582 FBtr0084180 3 1 1 177 3R 17913072 17913160 TGTCTGACTTGTCCCAATCC 59 17913300 17913318 ATCTGCCATTGACGATGGT 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 3 5 5 89 3R 17888572 17894845 CATCCAGATTTCAACTTTGTCG 58 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 dnd FBgn0038916 FBtr0084151 2 1 1 106 3R 17711940 17712021 GACATAACCACGGTAACGC 59 17711852 17711871 GGACGTATCTTCCATTGACC 58 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 3 2 2 80 3R 16751813 16751896 GACAATGTGGAGATCCATAAGG 58 16751934 16751955 GTCCTCCTTGTACATGATAACC 58 NA Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 2 1 1 60 3R 15742695 15742769 ATTTGGTGACATAACAGCGG 59 15742654 15742675 GAAGCAGTCGTAAAGTATGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4733 FBgn0038744 FBtr0301117 3 1 1 81 3R 15723303 15723321 TCTATTCGGTAAACCGCAG 57 15723366 15723477 AGACTGATCATCTCCAGCA 57 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 2 2 2 80 3R 15682733 15682752 GTCTCTGATGAGGCTTACCA 58 15682615 15682692 AAGGGATTGGAATAGCTTCAC 58 NA Drosophila melanogaster 61 CG11407 FBgn0038733 FBtr0083790 3 1 1 84 3R 15607164 15607241 CATCGCTCAGATCTCAGCT 59 15607288 15607307 CATATAGCTGGCAATGTGCA 58 NA Drosophila melanogaster 61 Naam FBgn0051216 FBtr0083786 2 1 1 80 3R 15522366 15523039 GCAAGGACACGAGATACTG 58 15523081 15523101 CAGTCCAATGAGTAGAAGACG 58 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 2 3 3 172 3R 15229537 15229625 TCTTTCACTTGAACCGGAG 57 15229760 15229779 TGTTGATACGAAGTCCTTGG 57 NA Drosophila melanogaster 61 CG3739 FBgn0038702 FBtr0083757 3 1 1 80 3R 15219552 15219635 TATCCCTATAACTCCTCTGTCC 57 15219676 15219694 ACGTTAATCACATCAGCCA 57 NA Drosophila melanogaster 61 gatA FBgn0260779 FBtr0083718 1 1 1 80 3R 14854381 14854454 GGAGCATTAAGCAGCTAACAG 59 14854321 14854340 CATCTTGCAGAGCATCTTCG 59 NA Drosophila melanogaster 61 CG31229 FBgn0051229 FBtr0083663 2 1 1 84 3R 14494468 14494486 AAGAATTTCGCGCTCATCG 59 14494603 14494621 CATTCTTCCAGTCCGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10864 FBgn0038621 FBtr0083654 1 1 1 60 3R 14236739 14236757 CACGAACGATGTACTGAGG 58 14236697 14236716 ATAGCCGTGTTTGACAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358 3 1 2 139 3R 14114261 14114280 GATTGCAACACGTATTGCCA 59 14114076 14114094 ATATGGTGTCCGTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14317 FBgn0038566 FBtr0083541 2 1 1 60 3R 13908110 13908131 GCAACAAATATGTTCAGGTCAC 58 13908149 13908170 AAACCATCCTCCTGATATTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17556 FBgn0038462 FBtr0083375 2 1 1 60 3R 12820777 12820860 AAATACGATACACAATGGGTGG 58 12820738 12820756 TGCGAATAGTAAGTGCGAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sb FBgn0003319 FBtr0083250 1 1 1 157 3R 11967287 11967399 GAATCCCAATAGCATTTGGCA 59 11967518 11967536 TTGGCAAATTGACGATGCC 59 NA Drosophila melanogaster 61 Hel89B FBgn0022787 FBtr0301715 3 1 1 82 3R 11808225 11808312 GCCTTGAAGCAACTTCTCC 59 11808358 11808376 TGGCAGAAGATTAGGGCAC 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 2 4 4 80 3R 11217397 11217416 TCCACGATGAGTCCAAATCC 59 11217456 11218027 ATCACCAAATACCTTGATCGTG 58 NA Drosophila melanogaster 61 CG31301 FBgn0051301 FBtr0083087 2 1 1 81 3R 11172862 11172942 CTATAGTATTAAGCTGAATGCCACG 59 11172978 11172999 ATTGGTGACTTTGATGTTGACG 59 NA Drosophila melanogaster 61 CG17304 FBgn0038267 FBtr0083012 1 1 1 64 3R 10685075 10685093 AATGATCATCGAGGTGCTC 57 10685029 10685049 ACATCATTCTAGTGGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14850 FBgn0038239 FBtr0082955 3 1 1 60 3R 10386711 10386732 CCACATCGATCATCTTATCAGG 58 10386753 10386771 TCGCTACTCCTCAATAGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 2 5 5 80 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796281 9796299 TCACCCATTTCTTCCCGAC 59 NA Drosophila melanogaster 61 Art9 FBgn0038188 FBtr0082879 2 1 1 81 3R 9769057 9769076 AACGATGTAATCTCCACCAG 57 9768941 9769015 CGTCCAGGACTATCTTATCCT 58 NA Drosophila melanogaster 61 CG8870 FBgn0038144 FBtr0082750 1 1 1 113 3R 9206531 9206626 TTCCTGTGCGCTATACGAG 59 9206703 9206721 TTCCTTGTCCCATGTCTGG 59 NA Drosophila melanogaster 61 CG10909 FBgn0038090 FBtr0082685 1 1 1 60 3R 8736100 8736118 GCTAGACACTTCCTGAACC 57 8736058 8736081 GACTAGTAGGCGAATGTAAATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6188 FBgn0038074 FBtr0082651 1 1 1 80 3R 8500835 8500916 CTTCGATAAGTGGGTCATTGAG 59 8500956 8500975 TCGAAACCATCCTGAATGTG 58 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 1 3 3 174 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 2 2 3 80 3R 8228132 8228153 TTATTTCTACGGAGCAAGTGAC 58 8228194 8228268 TGGTCACAACTTCCAATGC 58 NA Drosophila melanogaster 61 CG12224 FBgn0037974 FBtr0082505 2 1 1 81 3R 7807617 7807636 ATTAGCTATAGGTGGCTCCC 58 7807481 7807574 CTTTAGGGCCATAAGGATGC 58 NA Drosophila melanogaster 61 CG34307 FBgn0085336 FBtr0301079 3 1 1 80 3R 7723607 7723687 TCTAACATTGTGGCCATATACC 58 7723727 7723746 AATGGCCTGCACTATAATGG 58 NA Drosophila melanogaster 61 CG14718 FBgn0037939 FBtr0082426 3 1 1 60 3R 7527244 7527265 CGTCTACAAGAACAAGATAACG 57 7527284 7527304 ACTCACATAGGTTATAGTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17184 FBgn0037884 FBtr0082364,FBtr0082363 1 2 2 93 3R 7059704 7059724 CTTTATTTCGTCGGTGAACAC 58 7059280 7059649 ATCGAATTCGATTCTGGCC 58 NA Drosophila melanogaster 61 mthl11 FBgn0045443 FBtr0082247 1 1 1 80 3R 6227655 6227676 TTTACTGAATGTCATCAGCCTG 58 6227717 6227802 AAGTAGCCAGCATATCCGG 59 NA Drosophila melanogaster 61 pont FBgn0040078 FBtr0082226 2 1 1 81 3R 6089065 6089085 TACACAAGTCCCTGGAATCTC 59 6089128 6089207 GTGGTGCCACGAATAACAC 59 NA Drosophila melanogaster 61 CG5361 FBgn0037786 FBtr0082201 1 1 1 60 3R 5899842 5899860 ATGTCAGCGAAGAAACCGA 59 5899800 5899823 GATTCCGCCTCATTAAATATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art4 FBgn0037770 FBtr0082150 3 1 1 90 3R 5810183 5810257 TCTGCATTTGATAAGCATCCC 58 5810113 5810133 GCTAAACTCCACATCAAACCA 58 NA Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 2 1 1 174 3R 5639950 5639968 CATGGATAACCATGGGCAC 58 5640104 5640189 ACAAACAGGAAGTGAACTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 dmt FBgn0016792 FBtr0082086 1 1 1 80 3R 5539235 5539253 ACTGCTAGGGAATCGATGG 59 5539297 5539600 TCGTCTGGGTTGCTTATCG 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 1 2 2 60 3R 5091781 5091860 TAATAACCTGGAATTCGTGGGA 59 5091742 5091762 CTGGATGCGAATGATGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11975 FBgn0037648 FBtr0081960 2 1 1 110 3R 4819334 4819428 CTTTCCAGAGGGTGGTCTC 59 4819502 4819520 CACACGATCACCTTGTTGG 59 NA Drosophila melanogaster 61 CG9773 FBgn0037609 FBtr0081953 2 1 1 80 3R 4501232 4501307 CTGGGATACAATTGCATTCCC 59 4501172 4501195 CAGAAACAGTAGAAAGATGATGGG 59 NA Drosophila melanogaster 61 mRpL19 FBgn0037608 FBtr0081901 3 1 1 120 3R 4499959 4500029 CTACAAGCGGATTGTGACC 58 4500113 4500131 GATTGTCTTCCGGTTCACC 58 NA Drosophila melanogaster 61 CG8021 FBgn0037602 FBtr0081878 2 1 1 65 3R 4477043 4477061 AACCAGAACACCCATTTCC 58 4477090 4477108 CTGAGGACTTTCATTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31460 FBgn0051460 FBtr0081873 1 1 1 103 3R 4388601 4388677 TAATATGTCCGCTTCAGTGAG 57 4388742 4388760 ATTCTGAGCAGAAACGCAG 58 NA InUTR Drosophila melanogaster 61 CG31454 FBgn0051454 FBtr0081870 3 1 1 119 3R 4347887 4347980 GTATGGTCTACATGTTGGCAC 59 4348061 4348079 AGAGGCTTCCATTTAGCGA 58 NA Drosophila melanogaster 61 Gfr FBgn0037567 FBtr0081863 1 1 1 83 3R 4128723 4128794 AAATCAAGGTCACATCCGC 58 4128658 4128676 AGTACTGAGTGGCGATCAC 59 NA Drosophila melanogaster 61 CG31464 FBgn0051464 FBtr0081830 3 1 1 60 3R 4117617 4117636 TGGAGATGTCCTTGGAAGAC 59 4117654 4117677 ATCTTCAGATGATGGTAGAAGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 1 2 2 80 3R 3670934 3670952 TTGATAGCCACCATCAGGA 58 3670995 3671117 GTTTGGATTGAGCAGGTAGG 58 NA Drosophila melanogaster 61 pyd3 FBgn0037513 FBtr0081780 1 1 1 87 3R 3573907 3573985 AAGGACACCGAGCTTATCG 59 3573838 3573856 CCAGAAGTCCTTCACCTGG 59 NA Drosophila melanogaster 61 alpha-Est4 FBgn0015572 FBtr0081546 1 1 1 80 3R 3364196 3364273 GACGACTACAACGAAGATGC 59 3364135 3364157 GTCATATAGGGACTTAAGCAGGA 59 NA Drosophila melanogaster 61 CG1288 FBgn0250845 FBtr0081604 3 1 1 149 3R 3033529 3033551 GCGGAGATTACATAGATGAAACG 59 3033347 3033365 GACCCGATAGTTGGAAGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081636 2 1 3 182 3R 2902550 2902624 TAGTCTAGGTCACTGAAACCAC 59 2902767 2902785 GTTGGTTGTACTTGGCACG 59 NA InUTR Drosophila melanogaster 61 CG17917 FBgn0037431 FBtr0081709 2 1 1 60 3R 2167801 2167820 AGGTCCTTGGATGTGATACC 58 2167840 2168061 TAACATTAAGAAACTCCTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Hpr1 FBgn0037382 FBtr0078667 3 1 1 84 3R 1645353 1645428 TTGGGAAATGACAACCTAACAC 59 1645290 1645310 GTAGGAAGTTTCGCTGTTCAC 59 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 2 3 3 80 3R 1535944 1536019 GTCTTACTCCTGCATTGCG 59 1536063 1536081 TTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 Rab23 FBgn0037364 FBtr0078727 3 1 1 118 3R 1507629 1508354 CCATTAAAGTGGTCATTGTTGG 58 1507532 1507550 CTCTAGGAAGTCCACTCCA 57 NA Drosophila melanogaster 61 CG2926 FBgn0037344 FBtr0078752 3 1 1 81 3R 1410391 1410905 GCATCTGATAAGGATGATGACG 59 1410331 1410352 GCAATGGTATATCCGTATCCTC 58 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 2 2 2 81 3R 1395125 1395144 AATCGTCGCTATGCATACAG 58 1395187 1395309 ATCTTGGTGAAGGTGTTCTC 57 NA Drosophila melanogaster 61 mRpL44 FBgn0037330 FBtr0078768 1 1 1 64 3R 1296247 1296265 TCGTGTCAAGCTCTTGGAG 59 1296149 1296167 AAACCCATCGCTTGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2022 FBgn0037292 FBtr0301312 1 1 1 80 3R 814173 814270 AAGTGCCTTAGGTTCAGCT 59 814111 814129 CATAACGCTGGCCAATCTG 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 2 4 4 80 3R 534707 534725 TCGAGGATAAGATCCGGGA 59 534768 534897 GTTTCAGTTCCTCTTGCGAG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078942,FBtr0078939 2 3 4 80 3R 272536 273433 CTCACATAGTGACTCGAGGA 58 272475 272493 ACATATGTGAGGCAAACGG 58 NA Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0078978 2 1 2 74 3R 92882 92900 TTCGACTACGTCTGTAGCC 58 92993 93011 CATAAGATCGCCCATTTGC 57 NA DesignNoJunction Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 2 5 5 128 3R 66128 66146 AGCAAGAGGACTTGGACTC 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 2 3 3 85 3L 23741800 23741875 CATATGTCAACAGCCAGACAG 59 23741916 23741940 GTTCCTTCATTACATTGAGTAGAGC 60 NA Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 3 2 2 90 3L 23332716 23332734 ATGTCACTTGGAATCGCAC 58 23334563 23334582 GAATAATCCCTCACAGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG32459 FBgn0052459 FBtr0078578 3 1 1 80 3L 22848833 22848906 GGTCTTCTAGTAGAGAAGGGT 57 22848773 22848792 GTCCGGATAGTCTGTAAGGT 58 NA Drosophila melanogaster 61 CG7369 FBgn0037188 FBtr0078530 1 1 1 81 3L 22739914 22739933 GACTCGTAACCTGGAATCGT 59 22739973 22740064 TTTAGGGTACTTGACTATCTCGC 59 NA Drosophila melanogaster 61 CG11437 FBgn0037165 FBtr0078505 2 1 1 60 3L 22462715 22462734 ACCACTTAACAGATGTGGCA 59 22462757 22462775 GTTGCAAAGAAGGCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11449 FBgn0037162 FBtr0078503 1 1 1 60 3L 22447616 22447634 ATCTTTCGGGTCCTTCAGG 59 22447658 22447676 TTGCTTCTGGTCATAGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14561 FBgn0037149 FBtr0078480 2 1 1 61 3L 22059608 22059626 TTGGAGACGATCTTCGAGG 58 22059651 22059669 GAGCTGGAAGCTTTATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32444 FBgn0043783 FBtr0078424 1 1 1 104 3L 21630405 21631259 ATATCCAGGACAAATTCCAGC 58 21631323 21631343 ATACGTGCCGAAATATCACTC 58 NA Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 3 1 1 114 3L 21628644 21628718 AACCTGCTTCACAATGCAG 59 21628796 21628814 CATCGATCTGTTCCCAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 3 3 3 85 3L 21562983 21563064 ATCGGGTTCAGGACTTCTC 58 21563112 21563131 GTTGATCAGGTCTTCGTCAC 58 NA Drosophila melanogaster 61 CG7172 FBgn0037102 FBtr0078377 1 1 1 60 3L 21561740 21561760 TGTGCTCCTTAACAAATTGCC 59 21561700 21561720 CTTCTCGGTCAAATGAATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7173 FBgn0037099 FBtr0078380 2 1 1 80 3L 21549433 21549454 CAAGCCCATTAAGGAATACACC 59 21549025 21549394 ACCTTTGGAATATCTTGCTGC 59 NA Drosophila melanogaster 61 CG7519 FBgn0037087 FBtr0078353 3 1 1 136 3L 21486447 21486531 CACTTTAATCTCATCACCAGC 57 21486627 21486647 GCGGATTTGAGAATATCATCG 57 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089461 3 1 3 220 3L 21169419 21169437 ACTCGTTACGCGTATTTGC 59 21169621 21171207 TTCTGCGGCAACTATTTGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10586 FBgn0037036 FBtr0078335 2 1 1 93 3L 20949100 20949233 GGAATCAGTCTCCATATCGGA 58 20949027 20949045 GTAAACCAAGGGACCTCCT 58 NA Drosophila melanogaster 61 CG7335 FBgn0036941 FBtr0074865 3 1 1 61 3L 20125755 20125773 GTGGATCTGGACAACTTGC 58 20125712 20125732 AAGACGTAGTCCACCATACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14187 FBgn0036938 FBtr0074868 1 1 1 112 3L 20105761 20105871 TTCTTGTTGGTTTCACAGCT 58 20105668 20105686 TAATCCACAGGTCGTCCAC 59 NA Drosophila melanogaster 61 CG17732 FBgn0036923 FBtr0074898 1 1 1 80 3L 19974803 19974825 GAATCCAAGTTTCTGTCTGAGTC 59 19974865 19975227 CTTCTTGGTTTCAGCACCG 59 NA Drosophila melanogaster 61 Grasp65 FBgn0036919 FBtr0074895 1 1 1 72 3L 19918206 19918660 GGCTACCACGTACTCAAGG 59 19918696 19918714 TGAAGTCGAAGAAGGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Acp76A FBgn0015586 FBtr0075038 1 1 1 189 3L 19044294 19044313 GATGTTCACTTGCTACTGCC 59 19044055 19044147 CAACTACTTCTAAACGGAGAATGG 59 NA Drosophila melanogaster 61 CG11637 FBgn0036822 FBtr0075065 2 1 1 80 3L 18885729 18885850 GTAGCTGAAGGCCTAATGGA 59 18885889 18885911 CTTGTCGTTATAGGTGATCAGGA 59 NA Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 1 1 1 152 3L 18716232 18716305 CCAATCCAATAGAGCAGCA 57 18716098 18716116 TAGCAGCCTTGTAGTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 term FBgn0003683 FBtr0075112 2 1 1 157 3L 18586660 18586678 TTTACCAACGAGGAGACCA 58 18586521 18586539 GTAAGATGCAAGCCCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13700 FBgn0036785 FBtr0299605 3 1 1 80 3L 18292861 18292938 AACAATGGTACTGAGGGTACG 59 18292719 18292740 GCCTAACATTTCATGCATACCT 59 NA Drosophila melanogaster 61 Cyp312a1 FBgn0036778 FBtr0075135 2 1 1 86 3L 18123726 18123746 TGTATAAAGGAAACTCTGCGG 58 18123600 18123681 GAAGAAGTCATTGATTGTGCAG 58 NA Drosophila melanogaster 61 CG32195 FBgn0052195 FBtr0075125 1 1 1 80 3L 18108310 18108330 TGCAGTTATTCATGGTGATCC 58 18108371 18108454 TGGAAATCCACAAGTGTTGC 59 NA Drosophila melanogaster 61 CG32186 FBgn0052186 FBtr0075172 1 1 1 80 3L 17788550 17788721 GGAGTCAAGGTTCTCATCTG 57 17788489 17788509 CAGTATTAGTCTCCACAGCTC 57 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291,FBtr0075292 2 2 2 80 3L 17015143 17015164 AGAAGGAGGAAATCATCCTGAC 59 17015012 17015104 GCTCGTCGAGATTCTTATCCT 59 NA Drosophila melanogaster 61 CG5027 FBgn0036579 FBtr0075457 3 1 1 111 3L 16222733 16222808 AGGAGTTCAAGGTTCGTGG 59 16222880 16222901 ATCCTTAAGGCATAATCCACCA 59 NA Drosophila melanogaster 61 CG13075 FBgn0036563 FBtr0301031 2 1 1 141 3L 16077651 16077725 CTCCGAATTTCTTGGATTGGA 58 16077828 16077846 AGGATTGGTACTAGGCTCG 58 NA Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075534,FBtr0075535 3 2 2 117 3L 15834216 15836653 CTATCTAAAGTGCCAATTAGCCAG 59 15834122 15834140 ATAGCGATGGACAGCTGTC 59 NA InUTR Drosophila melanogaster 61 CG13472 FBgn0036450 FBtr0075691 3 1 1 82 3L 14782306 14782433 ATGGAAGGTATTATGAGGCTGAG 59 14782474 14782493 CTCATGGTTTCCATAGCCCA 59 NA Drosophila melanogaster 61 Sox21a FBgn0036411 FBtr0075748 2 1 1 95 3L 14099677 14099696 AATTACTCACCGAAGGACAG 57 14097947 14097965 GTCGATACTTGTAGTCGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751 3 1 2 239 3L 13837017 13837132 GATATGTGGCTTGCTGCTG 59 13837329 13837353 CTCAGGAAGTATATGGTTAGAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075902 1 1 2 161 3L 12957989 12958010 CGGTATCCATGATATCCAACTG 58 12957714 12957867 GCAATACTTTGCCACTCGT 58 NA Drosophila melanogaster 61 CG14120 FBgn0036321 FBtr0075868 3 1 1 60 3L 12880920 12880941 TTATGTGATCTGTGAGGATGTG 58 12880962 12880980 GTTTGCTTTGTCCCAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10943 FBgn0036320 FBtr0075936 2 1 1 60 3L 12855637 12855657 GGATAGATTTGATGCTCAGGC 59 12855597 12855617 TAAGGTTGACAATTCCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11560 FBgn0036249 FBtr0075993 2 1 1 112 3L 12113585 12113603 ATTCTACGCAGTGTGAGCA 59 12113677 12113763 TGATTTCAGAGTCTGCTCCTC 59 NA Drosophila melanogaster 61 CG6947 FBgn0036233 FBtr0076045 1 1 1 80 3L 11972186 11972205 CAAGTACATTAGCTGTCCGG 58 11972248 11972317 CATGTGGTTTCCTCCTCAG 57 NA Drosophila melanogaster 61 CG14131 FBgn0036205 FBtr0076028 1 1 1 81 3L 11770594 11771324 TTCGAATCGCAGGTTAACG 58 11771369 11771387 ATGGGCTTTCGAATTCCTC 57 NA Drosophila melanogaster 61 rt FBgn0003292 FBtr0076146 3 1 1 101 3L 11579908 11579929 CGTTAACCTGAGAATCGATCTC 58 11579597 11579846 TCATCGAATACGATGTGCG 58 NA Drosophila melanogaster 61 CG33489 FBgn0053489 FBtr0089525 3 1 1 81 3L 11569480 11569499 TTTCATCGAGGTCACATCGT 59 11569098 11569440 GATCAAAGGGCTTATCGTATCTG 59 NA Drosophila melanogaster 61 Ir68a FBgn0036150 FBtr0076185 2 1 1 80 3L 11228366 11228385 TTGCTAATTGGGAGTTGGGA 59 11228208 11228325 AAGAGGTTCCGAATAAGTTGC 58 NA Drosophila melanogaster 61 nol FBgn0014368 FBtr0076214 3 1 1 87 3L 11123986 11124005 TTATTCTCTTCGCCATCGTG 58 11124055 11124073 GGAGTAGTCGGATCAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12522 FBgn0036131 FBtr0076209 2 1 1 137 3L 11101471 11101489 AGTAGCTCTTCCACTTCGC 59 11101590 11101608 CTTGGACTCCTCAGTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8009 FBgn0036090 FBtr0076255,FBtr0076254 1 2 2 136 3L 10631790 10632322 CCTAACATTGGTCGTCCTG 58 10632422 10632440 GCTTGAGTATCAGCTTCCC 58 NA Drosophila melanogaster 61 Ir67c FBgn0052058 FBtr0076293 1 1 1 60 3L 10425871 10425890 ATGCCTATGAAGCCTATGAG 57 10425830 10425850 CGAAGATACCTTTGCTGAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32055 FBgn0052055 FBtr0076304 1 1 1 104 3L 10212717 10212738 ATCTAACCACCAACTATCAGGA 58 10212578 10212654 GGTGACACCATTGAAAGTCTC 59 NA Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 3 2 2 88 3L 9835625 9835644 GTGATATACCGCTCCAGGAG 59 9834652 9835577 GTTGTGCACAATCTTAAAGCAG 59 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 3 2 4 164 3L 9707711 9708852 TTGTGCGAAGAAGTGACCA 59 9708980 9708998 CGATGTGGTAATTGGTGGC 59 NA Drosophila melanogaster 61 CG16719 FBgn0036029 FBtr0076394 1 1 1 60 3L 9678868 9678889 GTCAATGGACAGATGAAGAAGG 59 9678907 9678928 CATTGGCATAGTGTTCGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nf-YA FBgn0035993 FBtr0076504 2 1 1 255 3L 9435059 9435235 GCCAAGAAAGTGTAAGTGTG 57 9434823 9434842 ACACTTAAATTGTTGCCGGT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Hsp23 FBgn0001224 FBtr0076453 2 1 1 60 3L 9375465 9375485 GTTATGAGGCTGATAAGGTGG 58 9375507 9375525 ACCTTGATGGTCAGGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773,FBtr0089492 3 2 6 80 3L 9339778 9339796 AGCCATTTAAACTTCCGGT 57 9339839 9339920 AAGAACAGGAATCCTGTGTC 57 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773,FBtr0089492 2 2 6 80 3L 9339777 9339797 AAGCCATTTAAACTTCCGGTC 59 9339838 9339919 AGAACAGGAATCCTGTGTCG 59 NA Drosophila melanogaster 61 CG42509 FBgn0260235 FBtr0300644 2 1 1 60 3L 9262307 9262537 GCGTTATTTGAGAAAGGTGG 57 9262557 9262578 GTCATCGTTGAATTTGATGTCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535,FBtr0076536 1 2 3 93 3L 9154427 9155848 GATTGACTATAACCGCATCGT 58 9152838 9154372 GTGTAACCGAAGCTTTCGA 58 NA Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 1 2 2 120 3L 9011175 9011908 CATACCAGATCCGTTTCCG 58 9011073 9011091 CTGCTTCCATAGATCGTCG 57 NA Drosophila melanogaster 61 CG7081 FBgn0035876 FBtr0076602 2 1 1 87 3L 8332278 8332365 ACGTGTAAATCAGATAGATGCC 58 8332413 8332431 GATGGCTTGCAAGTTCTCC 59 NA Drosophila melanogaster 61 Sbp2 FBgn0087039 FBtr0076707 3 1 1 129 3L 8297666 8297684 ATCCGAATGCTATTCCGCT 59 8297774 8297856 TCACAATAGCTTCTAAATCGCC 59 NA Drosophila melanogaster 61 CG7194 FBgn0035868 FBtr0076714 2 1 1 109 3L 8297003 8297022 ATATACCAAGGAAGCCGAGG 59 8296582 8296934 AGTAACTTCCTCCAAGACTGAG 59 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 2 1 2 83 3L 8195746 8195764 CAACAACGTCTTCAACTGG 57 8195811 8196035 GATACATGCAGCTGTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32379 FBgn0052379 FBtr0273419 3 1 1 92 3L 7390210 7390231 GCTCCATTATAAAGGACGACTC 58 7390282 7390918 GGAAAGTCGCTTGTATAACCC 59 NA Drosophila melanogaster 61 CG8605 FBgn0035762 FBtr0076838 2 1 1 80 3L 7317838 7317915 ACTACAATCTCAGGCTGGAG 58 7317956 7317976 CAATCTGTTCTATGTCCACCG 58 NA Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 3 2 2 87 3L 7117435 7117511 GTTATGTCCACTGTCTGCA 57 7117366 7117385 TATACAGCAAGTGGTCATCC 57 NA Drosophila melanogaster 61 Or65b FBgn0041624 FBtr0077005 2 1 1 104 3L 6319952 6319972 AGACCTCTGCGTAATAATCAG 57 6320036 6320109 CATTGGTTAAGTATAGCGCTG 57 NA Drosophila melanogaster 61 CG10226 FBgn0035695 FBtr0077012 2 1 1 80 3L 6231454 6231475 GAAATTAGCTCTGGCAATAGTC 57 6231112 6231414 AGTTTACCTTGGTAATGGGC 57 NA Drosophila melanogaster 61 D19B FBgn0022699 FBtr0077017 2 1 1 110 3L 6177054 6177072 ACTTGCTACCCTTCCAGTG 59 6176902 6176920 GATGCATAGCCGATGTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7376 FBgn0035689 FBtr0076998 2 1 1 80 3L 6170781 6170799 ATCTGAAAGAGGATTCCGC 57 6170840 6170921 CACATACCATCATCACATACCT 57 NA Drosophila melanogaster 61 Lcp65Af FBgn0020639 FBtr0077057 2 1 1 107 3L 6129667 6129745 TAACTATGGCTACGAGACCAG 58 6129580 6129600 AAGGAATAGGTACCCTTGACG 59 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 2 2 2 145 3L 6121631 6121649 TTGATGGCGTTTGTCTGTG 59 6119582 6121463 ATAATGCCGCGTTCATCTC 58 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0077055,FBtr0273355 3 3 3 91 3L 6105512 6107402 CAATCGCAAGGTTACAGCT 58 6109056 6109076 GGTCCGAACATTTGATATGGA 58 NA Drosophila melanogaster 61 CG6592 FBgn0035669 FBtr0077044 1 1 1 80 3L 6053483 6053501 GGGTCTTTACTGGTGTGGT 59 6053545 6053621 CTCTTCGCCATGTCAACAC 59 NA Drosophila melanogaster 61 CG13288 FBgn0035648 FBtr0113148 1 1 1 81 3L 5901738 5901756 GACTTTCTGCTGGGTAACC 58 5901798 5901925 ATATCACAGTCACTACAGTCAC 57 NA Drosophila melanogaster 61 CG18586 FBgn0035642 FBtr0300903 3 1 1 82 3L 5866834 5866855 GCCAAACTTATCAATCGGAGAG 59 5866898 5866973 CCTCCGTGATCGAGATCTG 59 NA Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077124,FBtr0077123 2 2 2 60 3L 5744200 5744219 ATCGAGCATGATCTGTTCGT 59 5744159 5744179 TCATCTTCTTGATGCATCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHMP2B FBgn0035589 FBtr0077166 3 1 1 61 3L 5133045 5133063 GGTGGAGATCAGGAAGCAG 59 5133087 5133106 CAATGGACTGAATCTTGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15213 FBgn0040843 FBtr0077182 1 1 1 148 3L 5126166 5126243 GAAGTTCTTGCTCCTGAGC 58 5126036 5126054 TGAGCAGGAAGGATTGGTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG18418 FBgn0035568 FBtr0073366 1 1 1 60 3L 4689404 4689422 CAGCTTGCCTCCTATTCAC 58 4689362 4689383 GTATTCCTTCACTGAGATACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1265 FBgn0035517 FBtr0073228 1 1 1 80 3L 4255715 4255803 GCCTTTACAAACATGACTCG 57 4255843 4255864 CGAAATCAGGAAGTTTGATAGC 57 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564,FBtr0302565 1 2 3 80 3L 4198926 4199008 GCAATAAGGTTTATTAGCGGAC 58 4199048 4199067 CTGATCGTACAATCGAAGCA 58 NA Drosophila melanogaster 61 Gr64c FBgn0045477 FBtr0073196 1 1 1 81 3L 4031428 4031504 TAGCTTTCAATCCAAGGGC 57 4031547 4031567 GTTTAGTACGCGAATGATGAC 57 NA Drosophila melanogaster 61 CG1120 FBgn0035462 FBtr0073148 3 1 1 80 3L 3807000 3807071 TTTCAGTGCTATAGCCACC 57 3807115 3807133 CTGAGGGCATTTGTTAGGG 58 NA Drosophila melanogaster 61 dro5 FBgn0035434 FBtr0073062 2 1 1 90 3L 3316846 3316865 GTTCCTGTACCTCTTCCTGG 59 3316918 3316936 TCCTCCGTATCTTCCAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 1 3 3 80 3L 3227695 3227782 TACTTCTCCAGGGAGAACC 57 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 1 2 2 80 3L 3039187 3039208 CCAAGTTACTCCAAGAACTGAC 59 3039247 3039335 TGTGAAAGACCGTATAGTCCA 58 NA Drosophila melanogaster 61 spz5 FBgn0035379 FBtr0073011 2 1 1 92 3L 2886752 2886770 CACCCTTCGGAGGTAATCC 59 2886398 2886696 ACAGAAGATACGTGGGTGC 59 NA Drosophila melanogaster 61 CG9973 FBgn0035378 FBtr0113128 3 1 1 253 3L 2870166 2870184 CAAGGTCGAGAAGTTGCTG 58 2869580 2869949 TCTTCTTGGACTGCTTGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG42304 FBgn0259200 FBtr0299684 2 1 1 66 3L 2653600 2653618 CACAATCACCTTGTCCCTG 58 2653646 2653726 TACATATTTCTGCGAGGACTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072923 3 1 3 134 3L 2490363 2490382 AATAAAGCTCGGGCTATCAG 57 2490476 2490988 CACATCACTCTTTCTTCAAGTG 57 NA InUTR Drosophila melanogaster 61 CG15879 FBgn0035309 FBtr0072916 2 1 1 158 3L 2168774 2168963 CTAAGCGATTTCAAGGAGGT 57 2168635 2168653 TATGTAGTCGGGAAGCAGG 58 NA Drosophila melanogaster 61 CG42356 FBgn0259702 FBtr0299955 3 1 1 102 3L 2022472 2022490 ATAGAACATTGCCACAGGC 58 2022336 2022408 GCACAGTTATTTGAGAACAGC 58 NA Drosophila melanogaster 61 CG12018 FBgn0027903 FBtr0072775 1 1 1 60 3L 1776003 1776022 CGGAGGACAAGATTGTTCTG 58 1776045 1776063 TTTAGCTTGCCCTGAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 3 2 5 87 3L 1656738 1656757 ACTGAAGTCTGGTATAGCGG 59 1655701 1656688 GACTAGAGGTTCGCTACCC 59 NA Drosophila melanogaster 61 robl62A FBgn0028567 FBtr0072695 3 1 1 61 3L 1477947 1477965 ATAAGCTGTGCTTTCTGCG 58 1477990 1478008 TTCCTCTGGACTAACCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072676 1 1 2 116 3L 1331066 1331085 CAATTGGTGCGCAGATACTC 59 1331164 1331291 CTCAACGTTGAGCTTGCTG 59 NA Drosophila melanogaster 61 CG9194 FBgn0035192 FBtr0072651 1 1 1 80 3L 1236706 1236726 CTTCTCGTGGTTTCCTATTGC 59 1236768 1236845 TCGCTTCACCTCTAGTTCG 59 NA Drosophila melanogaster 61 CG13901 FBgn0035164 FBtr0072596 3 1 1 60 3L 837091 837110 CAAGAAGAACATTGAGTGGC 57 837050 837068 TACGCTGTATGTGTCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3344 FBgn0035154 FBtr0072609 1 1 1 85 3L 686635 686655 ACTTCTATAACGTGGAGACCC 59 686517 686588 ATACATGACCTCCTCCGGA 59 NA Drosophila melanogaster 61 Roc1b FBgn0040291 FBtr0072547 1 1 1 60 3L 358139 358158 TTTGTGGTGAAGAAATGGGT 58 358181 358199 AGTTGTCCACTGCTACGTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32344 FBgn0052344 FBtr0072576 1 1 1 80 3L 323984 324059 AAATTCCATAGAGTACGTGGTG 58 323925 323943 AACGTTTCGTTCAGTTGCT 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 81 3L 301612 301630 GAGTCCTACGGTATGGGTC 58 301673 301769 AGAAGCTTATAGCTTCCTCGT 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 2 5 5 84 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241426 241445 GTAATTTGTGGCTCGGTTGG 59 NA Drosophila melanogaster 61 CG34140 FBgn0083976 FBtr0110975 2 1 1 60 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183650 183668 CGATAAACATTCGAGCTGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snoRNA:Me18S-A1597 FBgn0086029 FBtr0114305 3 1 1 60 2R 20138845 20138865 GGACAATTGCGAATTAACTGC 58 20138886 20138905 CATCAGTCACATCACCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1389a FBgn0083046 FBtr0113525 1 1 1 63 2R 17221477 17221495 AAAGAGATTCCGGCTAAGC 57 17221519 17221540 CTGAAAGTCTACTTTCCAAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1153 FBgn0083006 FBtr0113500 2 1 1 67 2R 9445129 9445149 CCACAGTTATGCAATAAACGC 58 9445082 9445101 CGCAGATGTTAGTCAACACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33423 FBgn0053423 FBtr0086415 1 1 1 60 2R 15627904 15627922 ATACATCGGTTCTCGTCCG 59 15627862 15627881 TATAAGTACTAACCGCGCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0072408 3 1 3 175 2R 20849261 20852103 GACAAGTCGAAACTGCCTG 59 20849002 20849020 GGATGATGTCAGTGCTGTC 58 NA Drosophila melanogaster 61 RpL41 FBgn0066084 FBtr0100231 3 1 1 80 2R 20791306 20791416 AATGAGAGCTAAGTGGCGT 59 20791244 20791262 GCTTACTTGGACCTTGCAC 59 NA InUTR Drosophila melanogaster 61 CG33988 FBgn0053988 FBtr0100033 3 1 1 238 2R 20588051 20588138 CTACAGAAGAGATCAACGCG 58 20587771 20587789 CTGTAGCAGCAATCGTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4741 FBgn0035040 FBtr0072337 1 1 1 97 2R 20501484 20501563 TGATTATGAGCGCCAAACG 59 20498774 20498793 GTTCGTCACATTGATCTCCA 58 NA Drosophila melanogaster 61 Ir60c FBgn0259186 FBtr0302287 1 1 1 60 2R 20406043 20406063 ATTGTCTATCTCACAGCTTGG 57 20406083 20406103 CGAAGTCTGTAACTGGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir60a FBgn0034994 FBtr0072274 3 1 1 83 2R 20137807 20137926 CGACTGAAATTCGATGTAAACC 58 20137745 20137765 CAGTAATCCAGTCCAGTTAGC 58 NA Drosophila melanogaster 61 spag FBgn0015544 FBtr0072256 3 1 1 82 2R 20048322 20048341 AGTCAATACCGTGCAAACTG 58 20048384 20048461 GTAAGAAGCGCTCTATTGGAC 59 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 2 2 2 100 2R 19971017 19971038 CTAACTCAAACTGTCTATGGCT 58 19971096 19971184 GATTTAAGTTCAAAGGCTGGAG 57 NA Drosophila melanogaster 61 CG3860 FBgn0034951 FBtr0072201 3 1 1 80 2R 19880497 19880515 CACTTGACATTCCCGACTC 58 19880366 19880454 GCGTAAACTGGTAGTACTCG 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 CG9863 FBgn0034846 FBtr0290285 2 1 1 61 2R 19234805 19234825 CGAAATAGTGCTCACCTTCTC 58 19234845 19234866 TTTCTATATCCCGAGGATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13540 FBgn0034839 FBtr0072000 2 1 1 60 2R 19158389 19158407 CAATTGGGTGGTGATCAGC 59 19158431 19158449 GTATTTCGTCACCAGAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3831 FBgn0034804 FBtr0071993 3 1 1 140 2R 18828246 18828264 GCATCGACATAATGCGGAG 59 18828039 18828142 TATGGACGGAGGAACTTCC 58 NA Drosophila melanogaster 61 Gmer FBgn0034794 FBtr0071905 2 1 1 83 2R 18776214 18776232 GGAGGCTGTGATCAAGGAG 59 18776095 18776169 GCCAGATTTGTCAAATCTGCA 59 NA Nonspecific Drosophila melanogaster 61 CG13527 FBgn0034776 FBtr0071880 2 1 1 80 2R 18651480 18651499 GACAATCACTATTGCGGAGG 58 18651541 18651621 CTTGGATTGTCCCATGACAC 59 NA Drosophila melanogaster 61 Obp58b FBgn0034768 FBtr0071871 2 1 1 82 2R 18592249 18592451 TATCACTGCGCTTGAATGGA 59 18592496 18592514 ATGGTGGATGTTCTCCTCG 59 NA Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0071921 3 1 2 87 2R 18589998 18590931 AAAGTGGGATGCAACTACAG 58 18589930 18589949 AGAACACCCTGATACTCCTG 58 NA Drosophila melanogaster 61 CG3875 FBgn0034740 FBtr0071861 2 1 1 91 2R 18539340 18539507 GAGTATAGCAAACCACCTCCA 59 18539560 18539578 CGCGTACGATTCATGTCAG 59 NA Drosophila melanogaster 61 CG13506 FBgn0034723 FBtr0071822 2 1 1 80 2R 18274026 18278497 ACTATACGTGAGTTGTGCAG 57 18278540 18278558 CCGTACTCATACTCGTCGT 58 NA Drosophila melanogaster 61 wrapper FBgn0025878 FBtr0071821 2 1 1 80 2R 18267414 18267434 GTTCAAGAGCATACCAACCAC 59 18267475 18268366 CGGAAGGGAGTGTTTAAGGT 59 NA Drosophila melanogaster 61 CG34207 FBgn0085236 FBtr0112400 1 1 1 60 2R 18217114 18217132 CAGATCGGCAATGAACTCC 58 18217072 18217090 CACTATCGAACGGCATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071850 3 1 4 129 2R 18188504 18199208 CCGTCTAGATAAGACGCCA 58 18188393 18188412 CAACCACAATGAGGAACAGG 59 NA InUTR Drosophila melanogaster 61 Oatp58Da FBgn0050277 FBtr0071779 3 1 1 80 2R 18108125 18108199 CTCCATGCAAAGATTTGCCA 59 18108064 18108085 GCAAAGGTCATTGTCATAACAC 58 NA Drosophila melanogaster 61 CG33226 FBgn0069056 FBtr0300930 3 1 1 81 2R 17426160 17426226 TAAGCATAGAAATCATGCACCG 59 17426100 17426121 GGCAACATAGTTCAGAAATTGC 58 NA Drosophila melanogaster 61 grau FBgn0001133 FBtr0071548 2 1 1 89 2R 16898309 16898391 TACATCAAATGCAAGGACTGC 59 16898240 16898258 CTCCTCGTCTGGAACATGG 59 NA Drosophila melanogaster 61 CG9313 FBgn0034566 FBtr0071521 3 1 1 81 2R 16869957 16869975 AGAAGATGAACGTCACCGA 58 16870020 16870100 ATGAAGTCATGCGATCCGA 59 NA Drosophila melanogaster 61 CG34201 FBgn0085230 FBtr0112394 1 1 1 60 2R 16638502 16638588 CTTAGAAACAGCACCATCCC 58 16638609 16638629 GTATACGCGCACATATTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 Obp57a FBgn0043535 FBtr0086294 3 1 1 70 2R 16392675 16392694 TGTTCAACACTAGACTTGCC 58 16392727 16392796 TTGGCTTTCCTTAGCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 3 2 2 82 2R 15249502 15249523 CCTTACTTCATCTACTTCTCGT 57 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 2 2 2 112 2R 14697625 14697643 ATTCTTTGCCCTTACGGTG 58 14697465 14697549 CCGACCAATTATACTCGGG 57 NA Drosophila melanogaster 61 IM1 FBgn0034329 FBtr0086662 2 1 1 117 2R 14271481 14271499 CCAGTGCACTCAGTATCCA 59 14271580 14271667 GACAGTGGAACAGCATTGG 59 NA InUTR Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 2 6 6 130 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175123 14175142 AATATTCCACTCGTCCTCGT 58 NA Drosophila melanogaster 61 CG10934 FBgn0034263 FBtr0086859 2 1 1 60 2R 13610368 13610386 ACTACGCCCTACCAAATCG 59 13610408 13610428 TCGCCTAAGTTCTCATCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10950 FBgn0034205 FBtr0086990 1 1 1 164 2R 13082731 13082753 CATCTACCTCATAGTTCACAGAC 58 13082930 13082948 AATGAAATGTTGCCCGAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087053 1 1 2 60 2R 12845654 12845672 GAGTACGAGGCGTATCACC 59 12845694 12845778 TAGTCTAGTTCACATACGCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15712 FBgn0034131 FBtr0087127 3 1 1 123 2R 12372603 12372626 GACCAGAATCTATTCCTTGATAGC 59 12372448 12372522 ATCTCTGGAAAGTCTGGCAC 59 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 1 3 3 85 2R 11971383 11971469 CCCTTCAGTATTTGTCATCATACTG 59 11971322 11971341 TTATGTGTAGGCTCTTCGGG 59 NA Drosophila melanogaster 61 SP2353 FBgn0034070 FBtr0087209 2 1 1 80 2R 11929885 11929905 ATCATCTACCGTCATCGATGG 59 11929944 11930022 GAACAATCCATTCGATCTTCCC 59 NA Drosophila melanogaster 61 CG8370 FBgn0034060 FBtr0087203 1 1 1 80 2R 11889934 11889952 CATGAATGCGACACTCACG 59 11889991 11890067 CTGCTGTATATCTCAAGTATCTGC 59 NA Drosophila melanogaster 61 CG30472 FBgn0050472 FBtr0087360 3 1 1 93 2R 11310940 11311017 TTCCATCATTGACTCTGGAGG 59 11310867 11310890 GTGTATGAGTTACACTCATCTTGC 59 NA Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 3 2 2 122 2R 11068204 11076267 CCAACGACAAGGATCTGTG 58 11076350 11076371 TCTTGGTTATCTCCTGAATGTC 57 NA Drosophila melanogaster 61 NaPi-T FBgn0016684 FBtr0087463 2 1 1 88 2R 10732646 10732664 AACTCTACGGACTTGGCTG 59 10732460 10732594 TCGTACGGAATATTCGCCC 59 NA Drosophila melanogaster 61 conv FBgn0261269 FBtr0087540 2 1 1 80 2R 10160896 10160914 AAGTGCCTTTGGTAAGCTG 58 10160956 10161045 AAAGCTCGCTTGCTTATATCC 58 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574,FBtr0087573 1 2 2 80 2R 10118920 10119004 ACGATACGAAACATTTGCCC 59 10118859 10118877 CATCCACGTTATCACGCTG 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582,FBtr0087584,FBtr0087583 1 3 3 81 2R 10037783 10037801 TAAGCGAAAGATGGACGGT 59 10037313 10037738 CTGGGCATCATTGTGAGGA 59 NA Drosophila melanogaster 61 CG18369 FBgn0033860 FBtr0087624 3 1 1 60 2R 9485638 9485658 TCCAATTTCATAGCCAAGCAG 59 9485677 9485698 TCCATAAACGATCTCCAGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13333 FBgn0033855 FBtr0087676 3 1 1 60 2R 9443584 9443603 AAGACAGCGCTGTTATAGTG 58 9443625 9443644 AGCTTGGAGTCCATTCTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13332 FBgn0033851 FBtr0087674 1 1 1 71 2R 9413130 9413148 CTACAGCGGGATCATCCAG 59 9413183 9413201 TTTAGCTGACGTTCCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lat FBgn0005654 FBtr0087768 2 1 1 60 2R 9091851 9091869 TTCGTCTAAGGGTGTTCCA 58 9091750 9091829 TTATCCAGCACCTCATTAAGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087800 3 1 3 134 2R 8837581 8839685 CACAATGGCCTACAAGTGG 58 8837465 8837483 CAGACCAACATATCGCCCT 59 NA InUTR Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087799 2 1 3 107 2R 8838844 8839685 CACAATGGACAACACCTGG 59 8838755 8838774 GATCGACCCACATAGATGGG 59 NA InUTR Drosophila melanogaster 61 CG12374 FBgn0033774 FBtr0087854 3 1 1 99 2R 8649812 8649901 ACATCTCTGTGCACTTCCT 58 8649964 8649982 TTAAGGGTCTTCTCGAGGG 58 NA Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845,FBtr0087844 1 2 2 80 2R 8542530 8542550 GCTGATGTAATGATCAGAGCG 59 8542592 8542662 GAGCTCAGCCTTATACCGA 58 NA Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 3 2 2 84 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512589 8512786 TGTTCTCCGTATCTGTAGCA 58 NA Drosophila melanogaster 61 CG8594 FBgn0033755 FBtr0087826 3 1 1 80 2R 8460382 8460495 CCTTCCTCTACAATTCTGTTAAGG 59 8460531 8460552 AGTAAAGGTAGGGAATCAGCAG 59 NA Drosophila melanogaster 61 CG8818 FBgn0033751 FBtr0087941 1 1 1 203 2R 8405274 8405354 TAGTGGAGAGGAGAGCCAG 59 8405037 8405058 CTAATTCACTGCAGGATTTGAC 57 NA DesignRelaxed Drosophila melanogaster 61 Sr-CII FBgn0020377 FBtr0088004 2 1 1 80 2R 8097816 8097834 ATAGACTGGTGTTGTCCGT 58 8097643 8097772 ATTTGCTGGAATTCGACCT 57 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015,FBtr0088013,FBtr0088014 2 3 3 189 2R 8055651 8055670 TTAATGACAGCGGAATTGCC 59 8055415 8055499 AAGACTTACGGCTGTAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18343 FBgn0033683 FBtr0087982 3 1 1 60 2R 8026444 8026463 GAATGTGTCTACAGGAACGC 59 8026485 8026504 CCACGTATGTGATCAGATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Damm FBgn0033659 FBtr0088061 3 1 1 122 2R 7753095 7753113 TCATACAAACCTTGTGCGA 57 7752913 7753010 GAACTTGTTTCGAACCTGTC 57 NA Drosophila melanogaster 61 CG13192 FBgn0033653 FBtr0088031 3 1 1 92 2R 7713841 7713859 GATGTGATGGAATTGGCCC 59 7713914 7713996 AATCAACTTGTCGGTTGGAC 58 NA Drosophila melanogaster 61 CG30490 FBgn0050490 FBtr0088209 3 1 1 66 2R 7006864 7006884 ATGCTCAGGATCTAGGAAACG 59 7004528 7006838 GATATTATTCCCGCTTGCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198,FBtr0113065 1 2 2 94 2R 6791590 6791671 TCCACTTGCTGATAGCTGAC 59 6791728 6791746 CTCCTCGTAGGCAATCCTC 59 NA Drosophila melanogaster 61 CG30020 FBgn0050020 FBtr0088235 2 1 1 81 2R 6775658 6775676 TCCAGCCATAATGATCCGA 58 6775718 6775796 TTGGCTTGATTCTTATCTGTGG 58 NA Drosophila melanogaster 61 CG12325 FBgn0033557 FBtr0088227 3 1 1 80 2R 6712696 6712774 TTTGATGTCAACAGATACCGC 59 6712815 6712834 GTAATCCACAGCTACACAGG 58 NA Drosophila melanogaster 61 CG12918 FBgn0033477 FBtr0088433 3 1 1 81 2R 5938841 5939053 TGATGGAGAAGATCTGCGA 58 5938778 5938799 ATCTTGAGGAGTGTGAATTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 1 1 1 87 2R 5636338 5636412 CTTTCAATCGCCCATTCGG 59 5636460 5636481 GTGTTTCATTGTCTCCAAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30005 FBgn0050005 FBtr0088464 3 1 1 83 2R 5495069 5495090 GATCAATCGATTCCAGAAGGTG 59 5495128 5495214 GCGAGATATCTTATAATCGCTATGG 59 NA Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 2 2 2 97 2R 5474092 5474164 GATATCGCTGCACAACTCC 58 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 Cyp4p1 FBgn0015037 FBtr0088592 3 1 1 95 2R 5128338 5128422 AGTATTTGTGAAACCGCCA 57 5128478 5128499 GAAGCATTCTTCAATCTGACTG 57 NA Drosophila melanogaster 61 Cyp4p2 FBgn0033395 FBtr0088591 1 1 1 80 2R 5125667 5125845 AGAAATCTTTATAGCGGAGAGC 58 5125886 5125904 CGGTCCTTCAAAGAAACCA 58 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 3 2 2 76 2R 5095834 5095924 AGTCTGGAGTCACATGACG 59 5095964 5095982 GCCAGGTACAGATAAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 1 2 2 60 2R 5095791 5095809 CCTGTTTGTGACCTTCGAG 58 5095833 5095923 GTCATGTGACTCCAGACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Prp38 FBgn0050342 FBtr0088582 1 1 1 60 2R 5031848 5031866 CCTCACACTCAAGATGCTG 58 5031885 5031908 CTTGATAAACTCCACTACGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alc FBgn0260972 FBtr0088624 2 1 1 87 2R 5023207 5023284 GATACACCGCTATCGTGTG 58 5023138 5023156 CATCCTTGATAGACAGGGC 57 NA Drosophila melanogaster 61 CG8243 FBgn0033349 FBtr0088652 3 1 1 76 2R 4810589 4810607 CAACAAGTACTGCGTGGAC 59 4810799 4810817 GGATGCAGAGAAACATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 LvpL FBgn0002571 FBtr0088758 1 1 1 80 2R 4343837 4343857 TGATGAGCCTACTTTGAAGCA 59 4343712 4343795 GCCAAAGATCGCTTGAAGG 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809 1 1 2 80 2R 4047503 4047574 TACAAGACGGATGACGGTC 59 4047441 4047461 GACATAGAAGGAATTCGGAGC 58 NA Drosophila melanogaster 61 CG11196 FBgn0033248 FBtr0088870 3 1 1 128 2R 3881841 3882029 AGCGACGTAACTACAAGCA 59 3881731 3881749 CATTCGTTCCGATGGTCAG 58 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871,FBtr0113053,FBtr0088872 1 4 4 80 2R 3864217 3864302 AAAGTACCGAGGATATACATCTCC 59 3864160 3864184 GATCTTGAACATAGCTTTAACCTCC 60 NA Drosophila melanogaster 61 CG14763 FBgn0033243 FBtr0088875 3 1 1 80 2R 3854502 3854576 ACAACTACGACAGATATCGCT 59 3854442 3854461 AGTTGACCATGGAGTAGAGG 58 NA Drosophila melanogaster 61 CG14763 FBgn0033243 FBtr0088875 1 1 1 80 2R 3854503 3854576 ACAACTACGACAGATATCGC 57 3854442 3854461 AGTTGACCATGGAGTAGAGG 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088835 1 1 4 151 2R 3700183 3700790 GAATTCACTCCCGTGATCC 58 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA InUTR Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088933 3 1 3 80 2R 3629422 3645554 TCGTACAATGCAAAGTGCG 59 3629360 3629379 GTAGACGTCCATTCTGTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 2 2 2 106 2R 3348839 3348858 GTGGGAATCGTTGAGATTGG 59 3348697 3348772 AGACCATTGTTCTCCATTTGG 58 NA Drosophila melanogaster 61 cos FBgn0000352 FBtr0089015 3 1 1 170 2R 3273199 3273217 AACACGATGATCGTTCAGC 58 3272991 3273066 CTTGGAGTCTATCAGCTTGG 57 NA Drosophila melanogaster 61 CG30384 FBgn0050384 FBtr0089048 3 1 1 60 2R 3072303 3072324 GATTCTCTTACGCATTTCAGTC 57 3072345 3072363 TCACGTAGATGAACCTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ek FBgn0033133 FBtr0089031 2 1 1 83 2R 2931844 2931862 GTGAGAACTTTGTGGTGCT 58 2931906 2931983 CGGCAATCATCATTAGAATGGT 59 NA Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 3 2 2 80 2R 2588319 2588401 CGAGTATACGGGCAGATGG 59 2588257 2588277 ATCAGATACGAACAGACACCA 59 NA Drosophila melanogaster 61 CG8343 FBgn0040502 FBtr0085988 3 1 1 60 2R 2067468 2067488 CTCGTAAGCATTACATCCGAG 58 2067508 2067528 CGTAGTTGAAGAGGAAGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TpnC41C FBgn0013348 FBtr0086102 1 1 1 94 2R 954421 954493 AGCAAACTGCATTACTACGT 58 954346 954366 CATGCTAAGTATCGTACCCAC 58 NA Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111111 3 1 2 81 2R 434549 447875 GTATACTTCTGGGTTTCCGGA 59 447913 447936 CTCGGAGTGAATATAAGTAAGTGC 59 NA Drosophila melanogaster 61 snRNA:U2:34ABc FBgn0041720 FBtr0091789 1 1 1 60 2L 13244477 13244496 TAGTTCCTCCATTGGAGGAC 58 13244436 13244454 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 3 3 3 92 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759241 AAAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 CG3305 FBgn0032949 FBtr0085896 2 1 1 108 2L 21575100 21575969 CTATGAGGCTAGGGAGGGA 59 21576035 21576059 CAGATGAATAAACTGAGTAGTCTGG 59 NA Drosophila melanogaster 61 His4:CG33875 FBgn0053875 FBtr0091879 1 1 1 60 2L 21519655 21519673 CGTAATTCGTGATGCCGTG 59 21519613 21519632 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB38b FBgn0067311 FBtr0081454 3 1 1 100 2L 20816714 20816793 GTGAAAGATACCGTGCTAGTG 58 20816634 20816652 GTAATCACCGCCTTGTAGC 58 NA Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399,FBtr0081401 2 2 2 60 2L 20680492 20680512 TAGTGGTGCGGATTATAAGGA 58 20680452 20680471 GCTAGAGTTGGGATTGAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 2 2 2 85 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891876 19891897 GATTCTTGTCGTACTTCTTGCA 59 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271 3 1 7 75 2L 19572161 19572181 GAATTCCTCACAACATTCCCG 59 19571731 19571752 GCTCTTCTCGTTTCTGTATGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 3 2 2 107 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527940 19528094 ATAAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 1 2 2 105 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527942 19528094 AAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 CG18094 FBgn0032791 FBtr0081243 3 1 1 83 2L 19490498 19490519 ACTGGAACTTATAGACCTTCGG 59 19490557 19490642 CAACAATAATCTGTAGTCGTAGTCC 59 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0081167 3 1 3 106 2L 19119392 19119413 GCCACATACCCATTAGTAACAC 59 19119230 19119325 CTCCATGTCGATCGAAACC 58 NA Drosophila melanogaster 61 CG10700 FBgn0032754 FBtr0081171 1 1 1 60 2L 19078396 19078415 ACAAGGACTACGGCATAGAG 59 19078355 19078376 CAATTCGTATCCAACCTTTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mib2 FBgn0086442 FBtr0081142 3 1 1 99 2L 19037964 19038095 TCAAGTTGGAGTTCGTCAC 57 19038158 19038176 GTGATAGTTGGGACACTGG 57 NA Drosophila melanogaster 61 CG15172 FBgn0032740 FBtr0081140 3 1 1 60 2L 19023392 19023413 TTTGATGAGTTATTCCAGGAGC 58 19023433 19023452 CGGATGATTCAGTGTCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15167 FBgn0032709 FBtr0081101 2 1 1 93 2L 18740440 18740460 CCAGAGATCTACCTATTAGCG 57 18740515 18740533 TAAGTTCTGCGGCTTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0081095,FBtr0273194 3 2 2 60 2L 18689948 18689966 TAGTGGAGCCTAAGAAGCG 58 18689990 18690008 AGTGTTTCCACAGTGAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15140 FBgn0032631 FBtr0302408 2 1 1 98 2L 17286558 17286680 TACTTCAGGTGAAACCCTGG 59 17286740 17286759 TTATTCATTCCATTGGGCCG 59 NA Drosophila melanogaster 61 Gr36a FBgn0045487 FBtr0080962 1 1 1 80 2L 17176818 17176836 CTTCGGTAGGGCTAACCAG 60 17176878 17176969 ATTGCAGAAATTCCTGAAGCC 60 NA Drosophila melanogaster 61 CG42556 FBgn0260758 FBtr0301255 1 1 1 60 2L 16890776 16890794 CTCTTTCGTTCACTTCGCC 59 16890817 16890836 CGCCCAATAACCATTATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42555 FBgn0260757 FBtr0301254 1 1 1 80 2L 16895768 16895788 CCACCTAAGACTAGCATTTCC 58 16895828 16895908 CGACATTTCATCCGGTATCTC 58 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940,FBtr0080942 2 3 3 85 2L 16724283 16724301 ATGCCATCATCCTTTCCGT 59 16724156 16724234 GAGTTGTTCCAAGACGTGC 59 NA Drosophila melanogaster 61 EndoGI FBgn0028515 FBtr0080824 1 1 1 88 2L 16258172 16258260 TAGCACAGAACGATTACACC 57 16258311 16258329 GATTTCGTCTACCTGCACG 58 NA Drosophila melanogaster 61 CG18109 FBgn0028901 FBtr0080786 3 1 1 141 2L 15784160 15784245 CTTGTTAACGAGTAACTGATATCGG 59 15784339 15784362 TCCCATATGTAGATCATAAGCCTC 59 NA InUTR Drosophila melanogaster 61 l(2)35Df FBgn0001986 FBtr0080760 2 1 1 72 2L 15753407 15753425 AAGGAGGACAACTTCACCA 58 15753514 15753532 CTTTCTGATCTCCCTTGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11864 FBgn0028944 FBtr0080784 1 1 1 99 2L 15613065 15613136 ATGATGCATTTGCCGACAG 59 15612984 15613002 TCCATTTCAGTAGCTGGCT 58 NA Drosophila melanogaster 61 CG18482 FBgn0028891 FBtr0080741 1 1 1 81 2L 15403660 15403680 CAAACGAGCAAATTGCATACC 59 15402376 15403621 GGTTGCTAACAGGTAGTAAACAG 59 NA Drosophila melanogaster 61 CG15278 FBgn0032554 FBtr0080683 1 1 1 183 2L 14875655 14875673 ACACTGGTTCTCTTGTCGA 58 14875421 14875508 GAATCCACTGACTGAGCCA 59 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0300845,FBtr0080685 3 3 3 81 2L 14845466 14845487 TCTGATCTATTTCTATGCGACC 57 14845351 14845426 CCAACCAATTGAGTAAGACCA 58 NA Drosophila melanogaster 61 CG42681 FBgn0261567 FBtr0302803 3 1 1 62 2L 14744445 14744519 TGTTTCAGCTTGTACTAGTCAG 58 14744542 14744560 ATGATCCTAAGTTGCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15283 FBgn0028844 FBtr0300837 2 1 1 60 2L 14450837 14450857 ATTAGATCCTGTCGAGCTCTG 59 14450797 14450818 CAAGAGAACATCGTCTTAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9263 FBgn0032530 FBtr0080515 3 1 1 60 2L 13542197 13542215 ATTGGTACGGATGGATGTC 57 13541967 13541986 ATCTCAACATCGTCTTCCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7099 FBgn0032517 FBtr0080499 2 1 1 80 2L 13387653 13387672 AGGATCCTGGATTAATGCCA 59 13387715 13387791 AGATCCCAGAGATAGGGCA 59 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220 2 2 3 82 2L 13384731 13384754 CAAAGTATCCCAGTTCCATAAGAC 59 13384792 13385002 TGTTCTTCAAGCAAGTCTTCTG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0113039,FBtr0089910,FBtr0113040 2 4 9 109 2L 13261685 13271306 AGTTCTGGGTATGGACAGC 59 13271378 13271397 TAGGTGAAGGGCTTCTTGTC 59 NA Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 1 2 2 80 2L 12915838 12915917 CACAGTTCGATAGACTGTTGAC 59 12915958 12915976 CCATATAAGTGCAGCCCAC 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090021,FBtr0090017,FBtr0090013,FBtr0090023,FBtr0090018,FBtr0090026,FBtr0090022,FBtr0090016,FBtr0090029,FBtr0090015,FBtr0090025,FBtr0090014,FBtr0090019,FBtr0090027,FBtr0090024,FBtr0090020 3 17 17 80 2L 12738106 12738126 CCAATCTACTCGCATTTCAGC 59 12738166 12738250 CTCAATAAAGCGATCTCCCAC 58 NA Drosophila melanogaster 61 CG6792 FBgn0032401 FBtr0080305 1 1 1 186 2L 12048281 12048356 ACTTCAAGCTTAAGAACCCG 58 12048114 12048132 AGGTGAGTGTCGTATTCCC 58 NA Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0080234 1 1 2 80 2L 11076969 11076991 CAGGCAATCTATCCCAATATTCC 59 11076849 11076929 ATAGGCGCTGTAACTGGTG 59 NA Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080157,FBtr0080156 1 2 2 60 2L 11011787 11011805 ATTTCGAGGTGAAGCATGG 58 11011828 11011847 GGATAGAAGATACGCTCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ial FBgn0024227 FBtr0080180 3 1 1 83 2L 10857783 10857856 CATACGGACAGCCATACGA 59 10857718 10857738 AGTAGACACGTCCAAATTTGC 59 NA Drosophila melanogaster 61 CG6729 FBgn0032296 FBtr0080119 1 1 1 61 2L 10742593 10742612 ACGAGAGCTTGAACTATGAG 57 10742499 10742517 CTTCTTTAGGCCCAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18284 FBgn0043825 FBtr0300805 1 1 1 80 2L 10644140 10644353 CACAGATTCAGAGTCAAGGG 58 10644394 10644414 GTAAACATGACCTTGGTTCAG 57 NA Drosophila melanogaster 61 Lrr47 FBgn0010398 FBtr0080092 1 1 1 80 2L 10517930 10517949 CTGAGCTTCGAGATATGCAC 58 10517992 10518071 CTCCGAGGGAATCTTGGTC 59 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031,FBtr0080030 2 2 2 80 2L 10460508 10460589 ATCGATAACAAGGGTGTTACTC 58 10460627 10460648 GGAATTTCTGTGCTTAATGTCG 58 NA Drosophila melanogaster 61 CG5322 FBgn0032253 FBtr0080042 1 1 1 81 2L 10454188 10454263 ACCGATGAGAAAGGTCGTG 59 10454125 10454145 CATTAGGTCGATGTTCCAACG 59 NA Drosophila melanogaster 61 RfC3 FBgn0032244 FBtr0080019 1 1 1 80 2L 10419867 10419885 GGTTCGCTCCATTATCCCA 60 10419928 10420007 CCTCAGTTATCTGAACGGCT 60 NA Drosophila melanogaster 61 Ip259 FBgn0025366 FBtr0080017 2 1 1 190 2L 10408373 10408743 GTTGCCGAAGCAAGATCTG 59 10408897 10408915 AAGAGTTTGGCCTTGATGC 58 NA InUTR Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 2 3 3 85 2L 10324300 10324387 GATATTCCAGGCTTTGCCA 57 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 1 5 5 80 2L 10297752 10297773 AATCGAGGTAGAAGACGAATCC 59 10297595 10297713 CAAGTAAATAAGCGTACGCCA 59 NA Drosophila melanogaster 61 CG34159 FBgn0085188 FBtr0112350 3 1 1 128 2L 10203021 10203391 GGATCAAGGTCTACGAACAG 57 10202912 10202930 TCACATGGATGTTCTGCAC 58 NA Drosophila melanogaster 61 CG13133 FBgn0032181 FBtr0079969 1 1 1 66 2L 10091746 10091764 CTGATGATTACGGTGCCAG 58 10091698 10091716 TGGGCTCAATCTCGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0079787 1 1 2 80 2L 8955580 8957534 TAGGGAAGATACAGAATAAACCCG 59 8955523 8955543 GGCAGTATCACAATCATCAGG 58 NA InUTR Drosophila melanogaster 61 Trs23 FBgn0260861 FBtr0079730 1 1 1 108 2L 8686485 8686561 AATAAATGTGGGCCATGTCC 58 8686632 8686650 ATAGTTCTCCGGTGCATCC 59 NA Drosophila melanogaster 61 CG17293 FBgn0032030 FBtr0079650 1 1 1 60 2L 8375349 8375368 AAGGTGTCCGTACTGAATGG 59 8375391 8375409 TTGGATTGAACTGAACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12375 FBgn0031987 FBtr0079642 1 1 1 73 2L 8126766 8126788 CCTTAAGTGTTTCATTTCCCTCC 59 8126657 8126675 TGGTAACAGCCGGAATCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42533 FBgn0260486 FBtr0300897 2 1 1 80 2L 7482825 7482906 CACGATCTTCCTAGCATATCG 58 7482765 7482783 GTCAATGCGATCCTGATCC 58 NA Drosophila melanogaster 61 CG5958 FBgn0031913 FBtr0079466 3 1 1 135 2L 7431187 7431205 GCTCACATTCATCCAGGAG 58 7430847 7431090 GAAGTGCATCCTATTGTTCAG 57 NA Drosophila melanogaster 61 CG9542 FBgn0031821 FBtr0079265 1 1 1 65 2L 6488450 6488468 GAATTTGGCCGTGCTAGAG 59 6488351 6488369 TTCTCAGTCAGTTCCCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 2 2 2 81 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469925 6469943 CATTCCCTTGGGATGATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16947 FBgn0031816 FBtr0079271 1 1 1 80 2L 6460475 6460569 GTGAGATTTGGTAAGTACACCT 57 6460416 6460436 ACATCCATGACAATGGTACTG 58 NA Drosophila melanogaster 61 CG9222 FBgn0031784 FBtr0079201 3 1 1 115 2L 6131674 6131751 CGAGACCAGTCATAGGGTG 59 6131829 6131848 GCTTGAATAGCGTACGTGAC 59 NA Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 3 2 2 84 2L 5993335 5993479 TCAATAAGGTGCGAACTCG 58 5993269 5993288 TGAACGAACAACTCTAGCTC 57 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079120 3 1 3 80 2L 5580899 5580980 TGGCTACACAAGAAGAGCA 59 5580837 5580858 ATAGTTCATGGTCGATAAGGGT 58 NA InUTR Drosophila melanogaster 61 mid FBgn0005511 FBtr0079093 3 1 1 98 2L 5465489 5465897 TGGATAAGAACGGACAGATCG 59 5465957 5465975 GATTCGACGGAATGCTCTG 58 NA Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079132,FBtr0079131 1 2 2 275 2L 5436992 5437010 AATTACTCCTCGTGCACTG 57 5436680 5436698 ATCAGAATATCCAGCTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026,FBtr0111024 3 2 2 107 2L 5077705 5077784 AACTTCCGATGGTACCGAG 59 5077616 5077635 ATCGATGGAGAACAGACCAC 59 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0079017,FBtr0302570 2 3 3 191 2L 5071306 5071324 AGATGGAAATCACCCAGCA 59 5071732 5071750 GTTCCTTGGTTTCACGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 3 2 2 77 2L 4954841 4954859 ATCTACTACGGAGCCACCT 59 4954782 4954800 GTGGTTCTGGATGAAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon25Bii FBgn0031654 FBtr0079055 3 1 1 72 2L 4952557 4952575 CTCCGACTACCTGAACTGC 59 4952503 4952521 ATCGGTTCCATAGACGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3036 FBgn0031645 FBtr0077391 3 1 1 125 2L 4902790 4902808 ATGGCTTGGATATTGCACC 58 4902895 4902983 GGAAGGATTGATCCTTGTAGG 57 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077382,FBtr0077381 1 2 2 84 2L 4795561 4795850 ACAAACGAACGATCTGCAC 59 4795896 4795916 TGGAGAACTCCACGTTTAGTC 59 NA Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 2 2 2 81 2L 4651674 4651768 CCAAGCAGAACTGCTTCTG 59 4651812 4651831 CAAGGATACTTGTTGGAGCG 59 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 1 2 2 81 2L 4399591 4399669 AGGAGAACAAGGTTAACGC 57 4399714 4399732 TAGAAGGGCGAATTCATGC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 2 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343806 4343825 AGTAGAAGGCCTTCAAGGAG 58 NA Drosophila melanogaster 61 Sr-CIII FBgn0020376 FBtr0077466 3 1 1 87 2L 4121121 4121141 AGTAAGAAACCTGACGATCTC 57 4121187 4121268 GAGTTTGGTGCAGATATTTCTG 58 NA Drosophila melanogaster 61 CG3277 FBgn0031518 FBtr0114460 2 1 1 80 2L 3313753 3313772 AAATGTCACGCTCTACATGG 58 3313815 3313979 TTGTACGAAGTGCCTTGTG 58 NA Drosophila melanogaster 61 cnir FBgn0243513 FBtr0077666 2 1 1 85 2L 3039578 3039651 ATTTACTATGTCCTCACACTGG 57 3039514 3039532 ATTACCCAGAAGTTGAGGC 57 NA Drosophila melanogaster 61 Bem46 FBgn0025109 FBtr0077643 3 1 1 84 2L 2988376 2988452 CATCCTGCTGATATTCTACTATGC 59 2988494 2988513 AATGGGTATGTAAATGCGGG 58 NA Drosophila melanogaster 61 Prx6005 FBgn0031479 FBtr0077684 1 1 1 140 2L 2877378 2877620 GCAACTTTGATGAAATCCTTCG 58 2877259 2877279 AGAGCTTAGGAACATCTTCGG 59 NA Drosophila melanogaster 61 CG9886 FBgn0031428 FBtr0077770 2 1 1 152 2L 2421888 2421906 GCATGGCATACTGGATCCT 59 2422019 2422096 TGGCCAGAAACTTTAATGACTG 59 NA Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077766,FBtr0077765 3 2 2 130 2L 2378208 2378227 TCAACTATTCACCTGCCCAG 59 2378374 2378398 CAGAGACTTATCTTTGTTCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 3 4 4 89 2L 2223626 2223718 AGATTACGAGACAAAGACAGTG 58 2223767 2223786 CTTGATAAGCAGAGCTCGAG 58 NA Drosophila melanogaster 61 CG42371 FBgn0259717 FBtr0299970 1 1 1 81 2L 2217067 2217085 ACACTGTTTGTCCTCGAGG 59 2216951 2217023 GACGAAACTCTCGATTCGTG 59 NA Nonspecific Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868 3 1 3 138 2L 1986095 1986806 CGAACAGAGTATCAACATGGT 58 1985977 1985995 GTGTTGTCATCGCGATAGG 58 NA Drosophila melanogaster 61 CG31670 FBgn0031375 FBtr0077870 2 1 1 190 2L 1952869 1954322 GTTTACTTTAGTCCGCGTGG 59 1952698 1952717 TCCATGATCTTGGCTATCGA 58 NA Drosophila melanogaster 61 CG5561 FBgn0031333 FBtr0077947 2 1 1 81 2L 1353832 1353900 AGTGCTGTCTTTGATACTCG 57 1353770 1353790 TGTCTGGTATCCTCTTATCGT 57 NA Drosophila melanogaster 61 CG5126 FBgn0031320 FBtr0077978 2 1 1 102 2L 1183603 1183622 TATGAGAATGTGCTTCGGAC 57 1183463 1183538 TCCCTAAACCTTCAACGTG 57 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 2 2 4 181 X 516160 516242 CCAGGTGGAGATTATATCAAGAG 58 516382 516476 GAAGAAGCTCCCTGATATGC 58 NA Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 2 2 2 88 3R 23779656 23779731 TATACCAGTACAAGAAGCACC 57 23779588 23779606 ATCATTCTTGGATTCCCGC 58 NA Drosophila melanogaster 61 Muc96D FBgn0051439 FBtr0084845 1 1 1 60 3R 21223727 21223747 TTACTACATCTGTCGTCACCA 58 21223687 21223708 GTTGAAGTACCTATCACCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir94g FBgn0039079 FBtr0273202 2 1 1 60 3R 19310122 19310140 ACAATGCCAGATTACTCGG 57 19310164 19310182 CTTTGTTGCCCTCCTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slmb FBgn0023423 FBtr0084032 1 1 1 80 3R 16946936 16947292 CTCAGACAATTCCATAAGACTGTG 59 16946879 16946897 CGAACCAATTCCTCATGGC 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082456 1 1 6 80 3R 7417729 7418101 GGCTCGAGATCAGTCTTCC 59 7416980 7416998 ATACTCGTTGGCTACGACC 59 NA Drosophila melanogaster 61 CG11986 FBgn0037656 FBtr0081967 2 1 1 86 3R 4841233 4841302 CACCTGTCTAACTCTAGACCC 59 4841350 4841368 TCTTTGAAATCCGGCTCCT 59 NA Drosophila melanogaster 61 CG42526 FBgn0260431 FBtr0300855 1 1 1 80 3L 9428419 9428442 GAGAAATACCACACTAGATACGAC 58 9428308 9428383 ACAGTACTCAACTGATTTCTGG 58 NA Drosophila melanogaster 61 ZC3H3 FBgn0035900 FBtr0076656 2 1 1 98 3L 8501329 8501445 CCATCTGTGTCAGCTTTCTG 59 8501250 8501268 AATAGTACCGACAGACGGG 58 NA Drosophila melanogaster 61 CG7213 FBgn0035861 FBtr0076718 2 1 1 89 3L 8232698 8232716 AAGTTGGCCTTTGTCATGG 58 8232506 8232647 GTGGAACATGGTTGTAATGGT 58 NA Drosophila melanogaster 61 CG12077 FBgn0035435 FBtr0300753 3 1 1 142 3L 3318588 3318708 TAGCCATGGTCTCTAAGGC 58 3318464 3318485 CGTCATTATGGGATAAAGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17922 FBgn0034656 FBtr0071675 3 1 1 101 2R 17581648 17581728 CTTCTCCGCACTTTGTTCG 59 17581565 17581585 GACCCTGGTAGTCACTATAGG 58 NA Drosophila melanogaster 61 Sfp53D FBgn0259967 FBtr0300312 1 1 1 68 2R 12632223 12632243 CCAAACGTTAGATGGTTTGGA 58 12632175 12632193 ACTTCATTCGGCTGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13218 FBgn0033587 FBtr0088195 2 1 1 63 2R 7120941 7120959 GAGGTGGATTCATTGGTGG 58 7120896 7120915 TAGCTTTCCTTGTAGCGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0081491 1 1 2 84 2L 21199947 21200216 ACAAACCCATTACCAATCGA 57 21199882 21199900 ATCATACGCTTGGTGATGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 1 4 4 62 2L 4904915 4904939 CTCCATCTTATCCATAGTTTACTCC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 Tps1 FBgn0027560 FBtr0077431 1 1 1 82 2L 4390633 4390651 TTTCTTCCTGCACATCCCA 59 4390694 4390807 CCAACATACCCTGTAGGATCTC 59 NA Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 2 2 2 74 2L 3545742 3545760 GATCACCTATTCGTGCGAG 58 3545798 3546739 TGACTACATCTGTGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Bem46 FBgn0025109 FBtr0077643 2 1 1 83 2L 2988376 2988452 CATCCTGCTGATATTCTACTATGC 59 2988493 2988512 ATGGGTATGTAAATGCGGGA 59 NA Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 1 1 1 80 2L 2870910 2871005 CCATCTATTAAGAAGTTCTTGGGTC 59 2870854 2870872 TAAAGCAATGGTCTCGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG3597 FBgn0031417 FBtr0077792 3 1 1 82 2L 2370665 2370683 GTGGCTCTAGTAACCGGAC 59 2370510 2370622 TAATTGGACAGCTTAATCTCGC 59 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 1 3 5 105 2L 835545 836562 CATCTACAATGCAGTGGGTG 59 835459 835477 AAGAGCGGCATATCGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2839 FBgn0031273 FBtr0077999 1 1 1 60 2L 626046 626064 TGCTCTCCAATGTTCACTG 57 626087 626106 TTCTGGATGGAGTGATACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tfb4 FBgn0031309 FBtr0077985 1 1 1 82 2L 1150317 1150387 CCATGCCACAAACTTCCTG 59 1150253 1150272 GATTAAACGCCTCGTACTGC 59 NA Drosophila melanogaster 61 CG3544 FBgn0031279 FBtr0078007 2 1 1 60 2L 785307 785328 AGAATGACTTTCTCATGCTCAG 58 785347 785367 TTCTTTAGAGGCATCACTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED15 FBgn0027592 FBtr0078062 1 1 1 83 2L 475104 475125 CTGGAGACTCTACTTAAGTGTG 57 475167 475241 TGAGGATTTACCAAACTGCTG 58 NA Drosophila melanogaster 61 CG13694 FBgn0031219 FBtr0078160 2 1 1 60 2L 116056 116074 CCATTGTGGAGGAATGGAG 57 116014 116034 TTATAGCTTCCCAAGTCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0301208,FBtr0086281,FBtr0301207,FBtr0086279 2 5 5 80 2R 16211661 16211679 GTTCCAGAGATCGGAGGTC 59 16211723 16211809 CACAACCTTCAGGAGAGCT 59 NA Drosophila melanogaster 61 LanB2 FBgn0002528 FBtr0076382 3 1 1 89 3L 9612734 9612752 ATCAGAATACACCCGCCTG 59 9612805 9612889 CTGGCTTGCATTCATTGCA 59 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 3 3 3 115 2L 7032326 7032344 GCCAGCTAGTGATAGAGCC 59 7032085 7032104 CAGGAACTTGTAGTCCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Act88F FBgn0000047 FBtr0083143 3 1 1 102 3R 11267251 11267330 CCATGTACCCTGGTATTGC 58 11267396 11267414 GAGTACTTCCTCTCGGGTG 58 NA Drosophila melanogaster 61 Ance-2 FBgn0032535 FBtr0080554 3 1 1 88 2L 13910656 13910727 TTGGAGAACTCACTTTGGAC 57 13910778 13910796 AGAGCATAGTATCGCCAGG 58 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 2 2 4 80 2L 2490782 2490801 ACTAAACTCGTCTCACAGGG 59 2490667 2490739 CACCGGAAGATTATGTCGC 58 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089804 1 1 2 123 X 10135761 10136879 GAGGAGTTCAGTCGTTCGA 59 10135656 10135674 CATTCGAGATACGCAACCC 58 NA Drosophila melanogaster 61 Pif1B FBgn0046874 FBtr0091717,FBtr0091716 1 2 2 80 3R 4600741 4600759 ATTGGGTAACACCGCTCTC 59 4600615 4600703 CCATCCAAGTAAATCTCATATCCTG 59 NA Nonspecific Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536,FBtr0113188 1 2 2 80 3L 22729079 22729555 GGACATTGTCACCCAAAGG 58 22729017 22729037 GTGCATGTAGATGTTTGTCGT 59 NA Drosophila melanogaster 61 tun FBgn0034046 FBtr0087287 3 1 1 80 2R 11740264 11740282 TTCACAAGTACGTGACGGA 59 11740322 11740406 CGGGTATGACTCTAAAGAATCTG 58 NA Drosophila melanogaster 61 Cda4 FBgn0052499 FBtr0077362 1 1 1 80 X 21990351 21990370 ACACTAACTGGTTCCAGACC 59 21986114 21990308 AGACGTCAGGTAGTTCGAG 58 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 1 5 5 101 X 21868784 21868863 GATACTCCACGAATTTGCCA 58 21868927 21868945 CGATGTTTGGTCGAGAACG 59 NA Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 3 1 1 79 X 20052302 20052947 CTAATAATCGGCGATAGCGG 58 20052242 20052262 ATGTAACTGCCTGAGAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12531 FBgn0031064 FBtr0074788 3 1 1 80 X 19619659 19619755 CGCAGAATAGATATGCGCT 58 19619797 19619817 GGTAGATGTTCACTGTGATGG 58 NA Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539,FBtr0114540 1 2 2 226 X 17115620 17115638 TGATCGCCTTAACCTCAGC 59 17116181 17116199 GTTCTTCTGCCAACCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 TwdlY FBgn0052570 FBtr0074326 2 1 1 71 X 16629698 16629716 ATCAGGAGGACAACAATGC 57 16629751 16629769 AGCTACCATCGGGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 2 5 5 165 X 15688454 15688537 GATCCACGTAACAAAGTTCCA 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 3 2 2 91 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403813 15403833 CTTGTCAATCTTGTCCGTCTG 59 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301299,FBtr0301298 3 3 3 81 X 13165567 13165587 TATCAACTCGTTTCAGGAGCA 59 13164667 13165526 CACCGCAAATTGATACTTGTG 58 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 1 2 2 131 X 10983472 10983559 GATTCCTTATCGACCCTCGG 59 10983653 10983671 GTTTCCAGGCATTGGATGC 59 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 3 3 3 142 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766822 7766840 CCAGAATCGAGTAGGCTGG 59 NA Drosophila melanogaster 61 Usf FBgn0029711 FBtr0070701 3 1 1 60 X 4441432 4441450 TACATCAAGAGCATGCAGG 57 4440829 4440848 TATCCGTCTCCCTTAGACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070301 3 1 2 80 X 1683702 1683770 TGGATGCAATTAGGCTGTC 57 1683812 1683832 GGCAATAATAGATTGTGGCTC 57 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 3 4 4 113 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522615 522633 ATCCTTGGACACCTTCAGC 59 NA Drosophila melanogaster 61 elav FBgn0260400 FBtr0100254 2 1 3 154 X 414228 414251 CTACACCTACAGTACACATATCAC 58 413263 414118 ATAATAAAGTCCACTTCGGCAC 58 NA InUTR Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 3 2 2 89 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 180998 181016 TTACTGGAAGCTGAAGCCT 58 NA Drosophila melanogaster 61 CG13376 FBgn0029518 FBtr0100649 3 1 1 81 X 160685 160703 GAGAGTGGGTCATCTGGTG 59 160622 160640 CAGAAGACCATCCACCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41607 FBgn0085817 FBtr0114275 3 1 1 74 U 4306341 4306362 CTTGGAATTTCCATTAACTCGC 58 4306397 4306415 TTCAATCGGTAGTAGCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246,FBtr0089245,FBtr0089247 3 3 3 80 4 896857 896931 CCGCATGAAGGTACAAGAG 58 896795 896816 GATCTAAGGCATGCTTTAACAC 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0089082,FBtr0301285,FBtr0089083,FBtr0089084,FBtr0089086 1 6 6 80 4 639033 639057 CCTAATCAAGCTATAAGGGAATTCG 59 639093 639172 TTCTCCACCTCCGATAATAGC 59 NA Drosophila melanogaster 61 CG31999 FBgn0051999 FBtr0089144 2 1 1 80 4 240821 240840 TTCCATTTCTACGAATCGGC 58 240645 240781 TCATTTGTATCTATGCAGGCAC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377b FBgn0083050 FBtr0113597 2 1 1 60 3R 26033314 26033334 CTGGAAGTTACATCCAAAGCC 59 26033274 26033295 GTGATAGCCGCATTAATTTACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31084 FBgn0051084 FBtr0085007 1 1 1 166 3R 22251201 22253693 GATGAAGATGCCACGAACAG 59 22253816 22253840 CTGTGTAACTGTATTACTGATGAGC 59 NA Drosophila melanogaster 61 CG1638 FBgn0039855 FBtr0113315 1 1 1 101 3R 27416778 27416796 GAATGCAGTTCTGCAGGAC 59 27416861 27416939 CTATTACAGCACCAAGCGG 58 NA Drosophila melanogaster 61 CG9702 FBgn0039787 FBtr0085664 3 1 1 81 3R 26407081 26407102 AGCGATTATTATATCGGCAGTG 58 26407144 26407220 TAGATCGGAACGTTTGCTG 58 NA Drosophila melanogaster 61 Spase12 FBgn0040623 FBtr0085435 2 1 1 115 3R 25316619 25316637 CATCATCACGTTCTTCGGA 57 25316466 25316540 GAATGGTGATCAGCGAGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG14526 FBgn0027578 FBtr0301945 3 1 1 60 3R 24710898 24710919 CCAACATCCTGATAGAGAACAC 58 24710939 24710958 ATGTAGAAGGGTTGTAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1647 FBgn0039602 FBtr0085326 3 1 1 81 3R 24646370 24646388 GGGAAATGTGCTATGCGAC 59 24646431 24646520 AGATCAATTAATCTTGCGGGC 59 NA Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 2 1 1 112 3R 21614032 21614174 TTTACGCCGTTCATTGTGG 59 21613938 21613957 TTTCATATCCATTCCACGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17195 FBgn0039369 FBtr0084921 3 1 1 60 3R 21602135 21602154 GACAATAATGGGCCAACGAG 59 21602094 21602113 CAAAGGACTCTTCAGCAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trf4-2 FBgn0039251 FBtr0084718 1 1 1 60 3R 20751842 20751860 AACGAGGTCTACAACTCCG 59 20751884 20751902 AGCTGATCACCATTAGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31515 FBgn0051515 FBtr0084429 2 1 1 60 3R 19214564 19214585 CAATCTCATCTACTTCACGCTG 59 19214525 19214546 CTTTCCAAATACTTCGGTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12499 FBgn0038968 FBtr0084295 3 1 1 98 3R 18271798 18271869 TCATAACAGAACTGCGACAC 58 18271719 18271737 CTAACTCCAAGGGCTTTCC 57 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 2 2 2 81 3R 16955074 16955160 CTTTGCATGCATGTATTGCG 59 16955012 16955032 AATGCCTGGGTATTAACAGTG 58 NA Drosophila melanogaster 61 TotC FBgn0044812 FBtr0083972 3 1 1 81 3R 16698769 16698850 TCTCTACTATGCCTTGCCC 58 16698895 16698913 TAAGGCTGTCAGATTCCCT 57 NA Drosophila melanogaster 61 RpS20 FBgn0019936 FBtr0083964 3 1 1 124 3R 16648270 16648288 CAAAGAACCAGAACTTGCG 57 16648604 16648862 GATTCTCATCTGGAAGCGA 57 NA Drosophila melanogaster 61 CG31206 FBgn0051206 FBtr0083875 2 1 1 80 3R 15933213 15933306 CCGATATGCTCATAATGTGCAG 59 15933154 15933175 GGTAGATTTCCATGAAACCTGG 59 NA Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 3 2 2 80 3R 15869772 15869849 TATACACGGAGCGATTTCCC 59 15869891 15869910 TCACCATCAAGGGTATCGAG 59 NA Nonspecific Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808,FBtr0301700 2 3 3 61 3R 15873184 15873269 TTTCTGAATGCCAAAGCCA 58 15873294 15873312 AAGAGCAGTATTGTTGCGA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7379 FBgn0038546 FBtr0083529 2 1 1 95 3R 13622722 13622740 AAATGCCAATGCCAGTACG 59 13622584 13622665 CCAAAGGAGATCTGATTGCAG 59 NA Drosophila melanogaster 61 CG5220 FBgn0038471 FBtr0083391 2 1 1 94 3R 12866604 12866622 TTACCGACAAGCCAAAGAC 58 12866677 12866753 GCTGAACACCATTTAGAATTCC 58 NA Drosophila melanogaster 61 CG10326 FBgn0038453 FBtr0083336 1 1 1 80 3R 12470094 12470279 AAGTCCACAGTGTTTGTAATCG 59 12470315 12470338 CAGTAGATTGTTAATGATGGCTCC 59 NA Drosophila melanogaster 61 Gr89a FBgn0038440 FBtr0089695 1 1 1 96 3R 12323822 12323842 GGTGAGGTCTGCTAAATTGAG 58 12323692 12323710 AGGAAATGGAGTCGAAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083185,FBtr0083186 3 2 2 62 3R 11686257 11686275 AGAAGCTCAAGAGAAGGCA 58 11686301 11686319 TATCGGTCGGTTCTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4525 FBgn0038358 FBtr0083170 3 1 1 81 3R 11602483 11602564 AATTGGGATCGAAAGAGCAC 58 11602607 11602626 ATAGTGTCACACTCTGTTGC 58 NA Drosophila melanogaster 61 CG14870 FBgn0038342 FBtr0083145 3 1 1 84 3R 11308096 11308114 AGAGCACCAGTCCATATGG 58 11308280 11308298 TAACCGAGTAGTGTCTCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31392 FBgn0051392 FBtr0083088 3 1 1 87 3R 11174091 11174109 GGACCCAGCAGTATTACCA 58 11174160 11174237 CTGGTAGCAAATCTGCGTC 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083059 2 1 6 135 3R 11069009 11070095 CGTAATTGATGTCTAAAGCTCC 57 11070191 11070209 GCAACATAGGATGGAGTGG 58 NA InUTR Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889,FBtr0082888 2 2 2 60 3R 9917076 9917094 CTTTGATCGGCTTCACGTC 59 9917118 9917543 GCCTTCGATTTGGATTTCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11686 FBgn0040551 FBtr0082735 2 1 1 97 3R 9086132 9087337 GTCTACTTGCTGAAATCGCT 58 9087397 9087415 AGACGAACCAGAAGACCAG 59 NA InUTR Drosophila melanogaster 61 CG5961 FBgn0038056 FBtr0082681 2 1 1 97 3R 8284853 8284934 TAGCTTGTGTCAAAGTATGGG 58 8284776 8284794 GATGAACATGTCTCGCCAG 58 NA Drosophila melanogaster 61 CG3313 FBgn0037980 FBtr0082555 3 1 1 80 3R 7841237 7841256 CCGGAAAGTATTTGGAGAGC 58 7841112 7841195 CCTCCGGATACACAATTCCT 59 NA Drosophila melanogaster 61 CG18347 FBgn0260743 FBtr0082484 3 1 1 87 3R 7796689 7796766 TGTATCACTAAGACACTGAAGC 58 7796814 7796832 CGAACAGAGGAGCAATCAC 58 NA Drosophila melanogaster 61 CG17360 FBgn0037949 FBtr0082531 3 1 1 80 3R 7608084 7608164 CCAGTAGCTTAATGGGTTCC 58 7608023 7608041 TAGGCGTAGAGCTTAACGA 57 NA Drosophila melanogaster 61 CG6689 FBgn0037877 FBtr0082368 3 1 1 81 3R 7043880 7043900 GCTTGAAGGGATTCTATCAGC 58 7043750 7043837 ACCTCGCACCAATATGGAC 59 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 1 2 4 169 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6611949 6611967 ATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Dh FBgn0012344 FBtr0082080,FBtr0112870 2 2 2 60 3R 5469370 5469388 CGCACAAACGGATATCCTC 58 5469410 5472750 GAAAGTCATCCTGTGAGTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11975 FBgn0037648 FBtr0081960 1 1 1 87 3R 4819163 4819266 CAAGACCAAGGATGCTTCG 58 4819317 4819335 AGTATTGGCGCTCCTTCTC 59 NA Drosophila melanogaster 61 Sgt1 FBgn0260939 FBtr0081862 3 1 1 61 3R 4130795 4130813 AGACCAAGGTGGTCATCAC 59 4130752 4130773 CTCCACAGCATAGTTCTTATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 3 3 3 80 3R 4068292 4068418 AATCGTATTATCGCTAGGTACTCC 59 4068235 4068253 CTCCATCTTCGGTACCACC 59 NA Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0114520,FBtr0081756 2 2 2 60 3R 3733512 3733531 GAGAGCCAGTTTATCATGCG 59 3733618 3733636 TTATTGCCTCATGGACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 3 5 5 94 3R 3697633 3697747 AGTCAATTTGTTGGAGCGA 57 3697557 3697578 GATCCTATAATAAACTCGTGCG 57 NA Drosophila melanogaster 61 CG31367 FBgn0051367 FBtr0081736 1 1 1 120 3R 2187626 2187737 AACGACAAGCGCTATTTGG 59 2187524 2187542 TTGACTCAGATGCTGTGGG 59 NA Drosophila melanogaster 61 Hpr1 FBgn0037382 FBtr0078667 2 1 1 83 3R 1645353 1645428 TTGGGAAATGACAACCTAACAC 59 1645291 1645310 TAGGAAGTTTCGCTGTTCAC 58 NA Drosophila melanogaster 61 Rab23 FBgn0037364 FBtr0078727 1 1 1 114 3R 1507629 1508354 CCATTAAAGTGGTCATTGTTGG 58 1507536 1507554 AGGAAGTCCACTCCAATCG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2566 FBgn0086661 FBtr0091666 2 1 1 60 3L 18889473 18889493 TGATAGAGCAATAAATGCGGC 59 18889433 18889451 ACTAGAACAGTGGCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32462 FBgn0052462 FBtr0078579 1 1 1 64 3L 22845607 22845625 CTACTCTACTGCGTGGTGG 59 22845561 22845580 TTATAAAGCCGGAACTCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32450 FBgn0052450 FBtr0078501 1 1 1 80 3L 22323188 22323206 GCTGTTTGTGGTAGTTCCC 58 22323250 22323327 GCCACTGTATGCATACTCC 58 NA Drosophila melanogaster 61 CG13252 FBgn0037016 FBtr0078245 1 1 1 99 3L 20730563 20735699 AACGACACTTGACCAGGAG 59 20735762 20735780 ATGGCGTATGGAACTGTCC 59 NA Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 3 2 2 80 3L 20005283 20005301 CTGAACTCCAAGATCACGT 57 20005344 20005421 AGTTATTGAACCTTGGTCGT 57 NA Drosophila melanogaster 61 CG7770 FBgn0036918 FBtr0074894 2 1 1 260 3L 19916969 19916987 TGAGTCGTACCAGAACCTG 58 19917297 19917400 TCCTTCTCCATGTTCTCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13380 FBgn0036799 FBtr0100555 2 1 1 60 3L 18594290 18594371 GGGACTTGGTCACTATTTCG 58 18594249 18594267 GGGATTGATTGAGAGCAGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 skl FBgn0036786 FBtr0075119 3 1 1 91 3L 18432688 18432706 CATCACCATGTGCAAGGTC 59 18432615 18432633 GTTGTATTTGAACGGTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5290 FBgn0036772 FBtr0075152 3 1 1 96 3L 17905290 17905360 GTGACAGTTGAAGATCTGCC 59 17905213 17905231 GTTGAAGGATCTCCCGGAG 59 NA Drosophila melanogaster 61 Krn FBgn0052179 FBtr0075197 1 1 1 284 3L 17647256 17647274 GAAAGCGAAACGCCTACTG 59 17643625 17643646 GCTCGCATCTTGATCTTAACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7564 FBgn0036734 FBtr0075175 1 1 1 60 3L 17508173 17508191 CGGGATTCACGACAATGAC 59 17508213 17508233 TCCGAGATGTAACTTACCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17362 FBgn0036393 FBtr0075764 2 1 1 60 3L 13979821 13979839 GATTCGTCTGACGATGGAG 57 13979863 13979881 TACCGGCAGTATCGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 1 2 2 80 3L 11556187 11556412 CGTCCAAGATAAAGATTAAGGACG 59 11556449 11556469 CCAAATAGGGAGATCCTCCTC 59 NA Drosophila melanogaster 61 CG7839 FBgn0036124 FBtr0076207 3 1 1 87 3L 11071415 11071507 AACAGAGTCACGATATGTCCTC 59 11071555 11071573 CCCTGACCCTTTACCTTGG 59 NA Drosophila melanogaster 61 CG18180 FBgn0036024 FBtr0076389 1 1 1 60 3L 9634498 9634516 CGAGACATTGGTCTGATCC 57 9634539 9634558 GGATCTTGTTGATCAGTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL14 FBgn0017579 FBtr0076633 3 1 1 102 3L 8594430 8594448 TACAAACTGGTCGCATTGC 59 8594512 8594764 GGACCATCTACCAGAACTCTG 59 NA Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 2 2 2 66 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529281 8529299 TAGAACTCCTCCCAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Jon66Cii FBgn0035887 FBtr0076666 1 1 1 67 3L 8386463 8386481 CTGTCTACTTCGGAGCCAC 59 8386414 8386432 AAAGTTACCGTTGCCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-SD FBgn0035806 FBtr0076807 2 1 1 60 3L 7644518 7644536 AACTTCCAGATGTCCAAGC 57 7644560 7644578 TACCGCCGATCAGATAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr65Ax1 FBgn0086900 FBtr0112465 1 1 1 87 3L 6140849 6140937 TCATATGCAGTTGAAACCAGC 59 6140782 6140800 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 1 3 3 93 3L 5338821 5338839 TTATCCGGATTGGGTGCAG 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 CG32243 FBgn0052243 FBtr0073322 1 1 1 80 3L 4541115 4541133 CACAGTCAGAGAAGTGCAG 58 4541000 4541072 CCCGACGATATTAGATCCCA 58 NA Drosophila melanogaster 61 CG14983 FBgn0035479 FBtr0073170 2 1 1 60 3L 3949029 3949049 CACAGCTATTTGAAATCGCTC 58 3948989 3949010 AGCAGATGTTGACTTTGTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14971 FBgn0035449 FBtr0073143 1 1 1 80 3L 3469318 3469398 GTAATTGGAATCGAAGGTGCC 59 3469258 3469277 GGCCCAAGTTATCTCATTCG 58 NA Drosophila melanogaster 61 CG32278 FBgn0052278 FBtr0073033 2 1 1 66 3L 3171098 3171176 CTCAAGCAGATCAAGGAATCTG 59 3171203 3171221 GTAGAGTCTTCAGGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857,FBtr0301465,FBtr0072856 2 3 3 81 3L 1943881 1943901 GTTCTGAAGAACAGATCAGGC 59 1943708 1943788 CGTACAAGTTAATTGCTCTAAGGG 59 NA Drosophila melanogaster 61 5SrRNA:CR33415 FBgn0053415 FBtr0086407 1 1 1 60 2R 15630852 15630870 ATACATCGGTTCTCGTCCG 59 15630810 15630828 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 egg FBgn0086908 FBtr0112777 1 1 1 80 2R 20665915 20665934 TGTATAACTCGTGTCCGGTG 59 20665801 20665875 GTGGAACTTCATGCACATAGTC 59 NA Drosophila melanogaster 61 Mov34 FBgn0002787 FBtr0072290 3 1 1 144 2R 20290866 20290884 GATGTGTCCAACAGCTTCG 59 20291058 20291077 TGTGATACCATCCCACAACC 59 NA DesignNoJunction Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 1 2 2 80 2R 20017586 20017604 AGACCATCAGCCAGTATGC 59 20017459 20017544 ATCCCGAATAGGTCTTGAGAG 58 NA Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697 1 1 2 80 2R 19963904 19963926 CAACAAGACTCTAGACTCAACTC 58 19963963 19964044 AACTTCTGAGCATAACATCCTC 58 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 1 4 4 80 2R 19941161 19941181 TCTATTCAACCCAAAGGATCG 57 19940975 19941061 GCAAACCCTTCTTTAATCAAGC 58 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 2 2 2 82 2R 19701896 19701914 CAAGGTGGTGATCTTTGCA 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 1 2 2 80 2R 19580314 19580392 AGGTGCCCAATAATACTTCCA 59 19580254 19580274 CAACCAAACTGTAATCTGCGT 59 NA Drosophila melanogaster 61 CG13557 FBgn0034867 FBtr0072019 3 1 1 93 2R 19363505 19363808 AGTCGCTATGGCAACAGAG 59 19363430 19363450 TAGCAGGGATACACCAATCTG 59 NA Drosophila melanogaster 61 CG13531 FBgn0034786 FBtr0071910 3 1 1 80 2R 18740201 18740223 CCCTGATTAATCTAATCGTCGAC 59 18740049 18740164 GAACGCTCTTGGATATCAACTC 59 NA Drosophila melanogaster 61 wrapper FBgn0025878 FBtr0071821 1 1 1 80 2R 18267414 18267433 GTTCAAGAGCATACCAACCA 58 18267476 18268366 CGGAAGGGAGTGTTTAAGG 57 NA Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 3 2 2 105 2R 18183292 18183367 ACGACGCATACGAGATCTC 59 18183436 18183454 CAGGGCATCTTCGTAGGAG 59 NA Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 2 2 2 101 2R 18183291 18183367 TACGACGCATACGAGATCTC 59 18183431 18183449 CATCTTCGTAGGAGGGCAG 59 NA Drosophila melanogaster 61 CG34029 FBgn0054029 FBtr0100084 1 1 1 95 2R 17858674 17858751 GCCTGATTTGTGGACATGG 59 17858597 17858615 CTCCTTCCTCGACAGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pirk FBgn0034647 FBtr0071682 2 1 1 60 2R 17549115 17549134 AAGATCCAGAACAATAGCGG 57 17549074 17549092 CCAGGTAGATCCTTCCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 1 3 3 136 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181862 ACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 Rgk3 FBgn0085426 FBtr0112646 3 1 1 118 2R 17163948 17163966 AATGCCTACGATGGACCTG 59 17164103 17165910 TCCAGTTCATCCTTGCTCTC 59 NA Drosophila melanogaster 61 CG30151 FBgn0050151 FBtr0086269 1 1 1 60 2R 16416699 16416720 AACTACGGATCAGTAAATGGAG 57 16416660 16416681 CAGAAATAAGTCCTCCTTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7744 FBgn0034447 FBtr0086535 3 1 1 80 2R 15341638 15341657 TTGTTATGGAGTGGGTATGC 57 15341698 15341769 ACTTCCCACCAGTATAAAGGA 58 NA Drosophila melanogaster 61 CG10927 FBgn0034360 FBtr0086705 1 1 1 60 2R 14501336 14501357 TTTCAAGAAGGATACCACTCTG 57 14501374 14501396 GTTCATCAGGTAATCGTAGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 1 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 Lhr FBgn0034217 FBtr0086917 2 1 1 60 2R 13319242 13319260 AAGCTACTCGAAAGCTGGG 59 13319283 13319302 AATTCGTCGTATTCGCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 1 3 3 97 2R 10860180 10860198 TAAGAATCCGCATCATCGG 57 10860259 10864760 ATTCCTCTATGGATCCCGG 58 NA Drosophila melanogaster 61 mspo FBgn0020269 FBtr0087477 2 1 1 85 2R 10572104 10600326 AAGACATTAGGTCGCACCC 59 10572037 10572055 TCCGCAAACTGTTTGACAG 59 NA Drosophila melanogaster 61 CG34184 FBgn0085213 FBtr0112377 1 1 1 80 2R 10253449 10253525 AAGTATCCTCCGATATTGATGGG 59 10253562 10253583 ACTACTATCATCTCCACCAGTG 58 NA Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087757,FBtr0087758 1 2 2 101 2R 9137568 9137588 GACCATCGGAATCAAATTAGC 57 9136976 9136995 GCAAACCGTTTCTACATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33474 FBgn0053474 FBtr0088260 2 1 1 60 2R 6309763 6309786 GTGAACTTCTTGATTCCTGTAGAG 59 6309803 6309823 GCACTTTGGCATAATACCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088429 3 1 2 96 2R 5955812 5955886 GGAATTGTCTATCGCGCAC 59 5955734 5955753 CACTAATTGGCAGACCATCC 58 NA Drosophila melanogaster 61 CG12140 FBgn0033465 FBtr0088384 1 1 1 80 2R 5798776 5798905 AAATGCACAGAGTTCGGAG 58 5798947 5798967 TGGTTATCCTGGGATATTTGG 57 NA Drosophila melanogaster 61 CG8232 FBgn0033352 FBtr0088654 3 1 1 80 2R 4817868 4817944 CTAATATCGCTGATACAGAACTGG 59 4817983 4818001 TGCGTTCTTGCTAGAATCG 58 NA Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 3 1 1 136 2R 4482354 4482372 CAACATGTTCTGCAAGCTG 57 4482029 4482047 GCGCATTATCACAGATGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9447 FBgn0033110 FBtr0300359 1 1 1 80 2R 2762344 2762422 CTAATGGATCGACGACAGC 58 2762282 2762301 TGAGTTATACGGCTCAACCA 58 NA Drosophila melanogaster 61 Tdc1 FBgn0259977 FBtr0086143 3 1 1 95 2R 2567571 2567589 CTTGGATCCGGGTTACCTC 59 2566506 2566525 ATCTTCTGCTCGAAGTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi18S-525i FBgn0083030 FBtr0113553 2 1 1 65 2L 20421645 20421666 ACTTACCCTAAATCTGTGTCTC 57 20421691 20421710 TATTCAGGATGCCGATTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33878 FBgn0053878 FBtr0091882 1 1 1 60 2L 21513367 21513386 AGAAGAACATCACCAAGACC 57 21513326 21513344 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0081491 3 1 2 77 2L 21199940 21200209 CATTACCAATCGAGAAGCCA 58 21199882 21199900 ATCATACGCTTGGTGATGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG31674 FBgn0051674 FBtr0081423 2 1 1 80 2L 20832455 20832675 AGACAATGTTGTGGTTACTCCT 59 20832716 20832734 TTACGCGAAGCCAAATTGG 59 NA Drosophila melanogaster 61 CG31803 FBgn0051803 FBtr0081010 2 1 1 81 2L 17412180 17412254 ACCTACGTTAAGCTGGACC 59 17412117 17412136 TAAGCTTGACCACTTCAGGG 59 NA Drosophila melanogaster 61 CG13244 FBgn0032577 FBtr0080792 1 1 1 99 2L 15916999 15917126 AGTTTGCACGAGTTCTTGG 59 15917189 15917207 TAGTGACAGTGCAGTAGGC 59 NA Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080771 1 1 2 86 2L 15749842 15750558 AACCAGAATGACTGGACCC 59 15749774 15749793 CTTGGGATAGCCCTCATCTC 59 NA Drosophila melanogaster 61 CG15256 FBgn0028880 FBtr0300847 2 1 1 87 2L 15550614 15550784 CGTTCAACATGGATGATCCC 59 15550833 15550852 TATTGCCTTGTGTAGCTCGA 59 NA Drosophila melanogaster 61 CG33911 FBgn0053911 FBtr0091915 1 1 1 105 2L 15232914 15232933 AATCGGATGTTCAAAGTCGA 57 15233001 15234588 TAGAACGAGAAATGCAGCG 58 NA Drosophila melanogaster 61 Ance-3 FBgn0032536 FBtr0100327 1 1 1 80 2L 13917579 13917600 GGACTACTACAAAGATCCCTCG 59 13917640 13917985 AAATGCCACCTTGTCAATGG 59 NA Drosophila melanogaster 61 CG9014 FBgn0028847 FBtr0080579 2 1 1 139 2L 13723181 13723199 AGATCAAGTGCACCTTCTC 57 13723002 13723078 CTTGGGTACCTTCATTCCG 57 NA Drosophila melanogaster 61 CG31730 FBgn0051730 FBtr0080480 3 1 1 60 2L 13259246 13259267 GTACACTTCTTTGGGTTATGCT 58 13259207 13259227 CGGTTCATCCGGATAGTAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ref2 FBgn0032439 FBtr0080376 2 1 1 117 2L 12611377 12611445 GCACTATCTCGCAACATGTC 59 12611279 12611297 TCGATCCTCCTTGAACACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5343 FBgn0032248 FBtr0080044 3 1 1 128 2L 10430371 10430446 AGGTTCAGGTTCTCGATGAC 59 10430262 10430280 GGATCTGGTTCCATCCCTC 59 NA Drosophila melanogaster 61 CG42366 FBgn0259712 FBtr0299965 1 1 1 80 2L 9926994 9927075 TATTCTCTTCCAGGTCCTAACTG 59 9927115 9927133 AAGTTCTCCGGTTTCAGGT 58 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 1 3 3 80 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575368 9575386 TTCACAAAGTCGGTGTCCA 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 3 4 4 80 2L 7444384 7444469 TTATCGATATGGAAGGGCTG 57 7444510 7444530 GAATGTAATCCAGCAACATGG 57 NA Drosophila melanogaster 61 CG5160 FBgn0031906 FBtr0079468,FBtr0302588 1 2 2 82 2L 7391786 7391868 CCAGTAAAGAATACGCACTGG 59 7391724 7391742 CAAGCTGACCATTCGATCG 59 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079377,FBtr0079376 2 2 3 107 2L 6802647 6802718 GACCAAATAGACGCTCGAC 58 6802495 6802514 CAAGTGGTGTACATGATGCC 59 NA InUTR Drosophila melanogaster 61 CG9117 FBgn0031766 FBtr0079222 2 1 1 60 2L 6037200 6037220 GCGAGTTTATAATCCCAGGAC 58 6037160 6037178 TTACAGCGCATTGATTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GluRIIB FBgn0020429 FBtr0089577 3 1 1 81 2L 5560523 5560656 AGGAGTTCCCACCTTATTCG 59 5560697 5560718 CGAATTCCTGCATCTTGATACC 60 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 3 3 3 80 2L 5347217 5348443 CGTTCACGACATGAATACCG 59 5348485 5348504 ATCATGCGATCCATTATGGC 58 NA Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079051 3 1 2 149 2L 4971167 4971187 CTAGTAATGACGGTTACTCGG 57 4970769 4971059 CACCCTTAATCATATTCTTGGC 57 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 2 4 4 80 2L 2495480 2495582 TTCGCAATGAGGTTCAAATCC 59 2495624 2495642 AGCACATGACCTGGTACTG 59 NA Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077964 1 1 2 80 2L 1166855 1166873 GACAAGTCTGGAGTGAACC 57 1166916 1166995 TCGCTTTGAGTATCTGTTCC 57 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 2 2 2 81 2L 1117494 1117512 ATCAGCAGCCAATATGTCG 58 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA Drosophila melanogaster 61 CG14340 FBgn0031302 FBtr0077955 3 1 1 88 2L 1113077 1113095 GAACTCGACCATAATCGCC 58 1113146 1113216 TTTCGGTAATGAGCTTCTGG 58 NA Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064 3 1 2 81 2L 546434 546577 CCACTTGTGGTAATCTTCTACAG 59 546615 546636 CCAGGTACAGAACTAGAACCTC 59 NA Drosophila melanogaster 61 ebi FBgn0023444 FBtr0078055 3 1 1 126 2L 416595 416613 TATGGGACATGTCCGATGC 59 416702 416799 GAACCATCGCAATTCCAGTC 59 NA Drosophila melanogaster 61 CG13693 FBgn0031235 FBtr0078126 2 1 1 72 2L 233145 233225 GAAAGAAATGCCATGACCG 57 233261 233279 TTTCCTCACTTCGAAAGCG 58 NA DesignRelaxed Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0301888 1 1 5 128 2L 155422 155507 AATTTAAGAGACTGCTAACGGC 59 155596 155614 TCAGATCGGTTAAGGGCAG 59 NA InUTR Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 2 3 5 91 2L 849927 849945 AACATGACCATCGGATCCT 58 837334 837355 GCCATCGATATGGATTTCACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 2 4 4 86 2L 1085133 1085215 CCCAACTCATCAATGGTGC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 3 2 2 81 2L 1117493 1117512 ATCAGCAGCCAATATGTCGA 59 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA InUTR Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 2 4 4 81 2L 1694369 1694387 CATGTACAAAGGCGAGGTC 58 1694432 1694555 ACCTTTGACCTGCAAACTC 58 NA Drosophila melanogaster 61 Rad1 FBgn0026778 FBtr0077747 1 1 1 61 2L 2574292 2574310 TCATCCAGGCCATCAAGTC 59 2574176 2574194 ATCTTCGGAGACTTGCACC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692 1 1 2 125 2L 2837350 2837368 TTCCTCAAGGCAGATGACG 59 2836170 2837204 ATGCAGAAGCACATTGTATCG 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 3 4 4 139 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882381 2882399 ATTGAACTTGTAGGCCAGC 58 NA Nonspecific Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 2 2 2 96 2L 3716096 3716166 CCCAGTCAGGTGAATCTGG 59 3716223 3716244 GTTCCTTTAACAGCTTGATGGT 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 3 8 9 86 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301538 1 1 11 85 2L 5004200 5008191 ATACGGATTGGATGCCTGG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 1 6 6 61 2L 5042504 5042522 CAACGTGGAGTTCGATCAC 59 5041807 5041825 AGTCGAATTCCTGAGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0091705 1 2 5 80 2L 5141874 5142006 GGAAATGACAGGATCATTGGG 59 5142046 5142066 GCATCCATGAGTTCAGATTCC 59 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 1 3 3 98 2L 5307905 5308033 TTCTAACTTGCATCCGTTGTC 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079075,FBtr0300012 3 2 3 89 2L 5364410 5364784 CAAGAAAGACTCAGTGGCC 58 5364837 5364855 TCGATGCGATTCTGATTGG 58 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 1 2 2 99 2L 6033999 6034020 ACGGAATGGATTATATGGTGTC 58 6033866 6033939 AGAAAGCTAGCTCCCTTGG 59 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 3 3 3 84 2L 6325593 6325723 GAGCATGGATAGTCTTACCGT 59 6325769 6325787 TTCCACATCTTCCTCGCTG 59 NA Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 3 2 2 80 2L 6447229 6447309 GTCAACGAGTATCTTGGAACC 58 6447169 6447187 GACCGAAGTGCTGAAATCG 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273248 2 1 4 100 2L 6680535 6680957 AAGTGCACAGTTCTGATGG 58 6680453 6680472 CGTGTCCAAGTTCGTATCTG 58 NA Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 1 2 2 80 2L 6729866 6729886 CCATTCAGGAAATGGTTTCAC 57 6729928 6730058 GGTTCATATCGCCAAATGC 57 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 2 3 3 80 2L 6770388 6770406 TCATCGAATTCTCCAGCCA 58 6770262 6770347 GTTTGTTATCTGGTGTCTTGGT 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 3 5 5 81 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079428 3 1 3 127 2L 7032261 7032280 GTAAGCTGATCCAACGAACC 59 7032086 7032104 AGGAACTTGTAGTCCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079479 3 1 2 200 2L 7711593 7711842 GTTTCATCACCGCCTTTCTG 59 7712004 7712023 TGATCACCGAGTAGTAGCAC 59 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 2 2 2 135 2L 7800619 7800638 ACTATTGGAGATAGAGGCCC 58 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 1 2 2 106 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026628 8026646 CTTGGACGTGAATTTGGCT 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0273381 2 2 4 91 2L 8250676 8252241 CTTCCAGATACCAGCTCCTG 59 8250604 8250622 GTTCATGGTGCTTGATGCC 59 NA Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 2 2 2 97 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380309 8380450 CTTCTCAGTGGCATAACGC 59 NA Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 2 2 2 82 2L 8391201 8391293 CGCAAAGCGACTTACAAGG 59 8391137 8391159 CCTTGTCACCAAACTTTAGAAGG 59 NA Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 1 2 2 86 2L 8712294 8712396 TTCGCAGCAAGAATACCTC 58 8712226 8712244 TTATCCAATACGGGCAGAC 57 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 1 3 3 80 2L 8938686 8938704 TTCATTCTGATCGCAGTGG 57 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 2 3 3 81 2L 8944285 8944303 ACCATCTGATTCCATCGCA 59 8944157 8944240 CAGTCAAGTCCCTCATCCG 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 3 3 3 81 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575367 9575385 CTTCACAAAGTCGGTGTCC 58 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 2 2 3 117 2L 9685192 9696199 TACATCAGCCATTTCCCTCC 59 9685094 9685114 CGGATTTCAAATCGTCTTCCA 59 NA InUTR Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079931 3 1 2 118 2L 10009528 10010746 CGCAAGGATGAATACACCG 59 10010825 10010846 CTCAGGAATTTGGTCTTCTTCG 59 NA Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 3 2 2 81 2L 10013571 10013643 CGAAGGAAAGATCACATCCA 57 10013509 10013528 GCTAATGCATCATCCTTTGC 58 NA Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 2 1 1 291 2L 10201418 10201436 GTACATCAAGGCGGAACAG 58 10201761 10201779 ACGCTTGTAGATCAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 3 2 2 85 2L 10351770 10351788 AGACCCACTATCCAGATGC 58 10350766 10351722 TTGAAACCAAACCTGCACTC 59 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 1 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 2 2 2 77 2L 10766269 10766402 ACTGTAATCCAGCCGATCC 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 3 4 4 76 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965843 10965861 GCTAAATCGCTAACGCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 3 4 4 103 2L 11258904 11258989 GAGAATACATTCGGCATGGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 1 1 1 81 2L 11936861 11936882 CGGAAAGCAATTAATCGAAAGC 59 11937105 11937123 AATATTCATGGTGCTGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 2 3 3 170 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105116 12105188 CGTTGGTGGAGATACCCTC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 3 2 17 127 2L 12727002 12727021 CAAATCGGCTCGAATCTGTG 59 12727111 12737410 AATGACGTGAAACCTTGGC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 3 2 17 137 2L 12727106 12729938 ATTTGGCCAAGTGCTATCC 58 12730038 12730057 AATGGCGTTGTATCGAACAG 59 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 1 3 3 246 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 1 2 2 80 2L 13908582 13908661 GTATCTGAGATACTTGGTCTCCT 58 13908701 13908719 GGATCATATTGGCCAGCCT 59 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 1 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 2 5 5 81 2L 14984074 14984208 CTAGTCATATTAATCACTCGCCTG 59 14984016 14984035 GTGAGAAGGCTTTGTATGGC 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300933,FBtr0300935 1 2 9 170 2L 15258921 15259019 AAACGGACAACTTTCCTGC 59 15258697 15258791 CGGGATAGATCACAATTCTTCTG 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 1 4 5 80 2L 15760339 15760416 CGATCCGGATTACAGAACC 57 15760277 15760295 GGATAGTTGGCTCCATAGC 57 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 2 2 3 96 2L 16044330 16044351 GGATCGACAGAAATTGGAACAG 59 16044466 16044802 CGTAGTGTTCATGATGTCATGG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 2 7 7 111 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467651 16467669 CTTGTAGTATGCCGTCGGT 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 3 4 16 104 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778468 16778486 CATATCGGGATCCAATGCG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 1 3 16 80 2L 16779139 16779159 AAGAAATGCACGAAGGTTCTG 59 16779198 16780558 GAAGAACACCTTTGTGTTACCC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 2 10 16 118 2L 16779838 16780560 ACACAAAGGTGTTCTTCCG 58 16780642 16780660 CTTACGGGACAGGTAACCA 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 3 4 12 88 2L 17715907 17716689 GGTTGTTATCCACGTGACC 58 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 1 2 2 80 2L 18679096 18679115 CACGATAAGCGAGGTTAAGG 58 18679153 18682279 GGGTTCTTAACATTACTATCCTCC 58 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 3 2 2 100 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699103 18699121 TGTCATGGCTTGTGTTGAC 58 NA Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 1 1 1 89 2L 18956473 18956493 GTCACCGAATTAGTACTGGAC 58 18956298 18956316 TTCTCCACTAGCCATGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 2 2 3 185 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123381 19123399 TGAAGAAGTGGGTACCCTC 58 NA InUTR Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 3 2 3 125 2L 19385700 19386089 GAGATTTCCAACAAAGTTTGGG 58 19385290 19385308 TACCGCTATAACCTCCACC 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081213,FBtr0081212,FBtr0081210 1 3 6 175 2L 19410625 19416414 GATGCTCTATTAGCCGACCT 59 19410403 19410487 TGCTCTTGATACACCTGGG 59 NA Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 3 2 2 81 2L 19762535 19762558 CATCCTATACCACATGTCTAATGG 58 19762295 19762497 ATGTATTTGCCCTGTTTCTCC 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720 1 1 4 154 2L 19902178 19907772 ATGTCAGAAGACAAATTGCCC 59 19907888 19908772 AAGTCCCGGTATTGATGGC 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081353,FBtr0081352,FBtr0301884 2 4 5 89 2L 20346164 20346182 ACTCGGTTCTCGTTCTTCG 59 20346232 20346316 AATTCGCATCTTGGTATAGCAC 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081353,FBtr0081354,FBtr0081352,FBtr0301884 3 4 5 80 2L 20312404 20322017 CATCAACAGAGCGTTCGAC 59 20322061 20322079 TTTCTATGCGAGACGACGA 58 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 1 2 3 80 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790649 20790669 CAATCCAATATCCCTGCATGG 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 1 9 9 88 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877070 20877157 AAATATACTGGGTACTCAGTCCC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 1 4 9 127 2L 20876951 20876969 CACTAGTCAGTCGCAGGTC 59 20874420 20875087 ACAGCGTGAACAGAAATTGTC 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 3 4 4 92 2L 21389066 21390056 ATTTACCGTTGAAACCGGC 59 21390112 21390130 ACGGATCCTCTTCTGTCTG 58 NA Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 1 2 2 80 2L 21660050 21660128 GCACCAATTGTACATCTACCT 58 21660168 21660188 AGATTACCGTAGAACGATTCC 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085902 3 1 4 165 2L 21717646 21717664 GGTGGGACCTAATAGCCAC 59 21719634 21720131 CGGTTCAACATCGTCTTCC 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 1 5 5 80 2R 580803 580821 CAAGGTTTGGTTCACCCTG 59 580662 580760 TCGATGAGCAGACTCTATCC 58 NA Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 2 2 2 85 2R 1963608 1963683 CTTTAAACACCTGGTGCCTG 59 1963542 1963560 GGGAATCCTTATCCAGGGC 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 1 2 6 166 2R 1982570 2010401 ATTCTATATCTTCAGGTCGCGA 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0086136,FBtr0301420 1 3 7 80 2R 2620750 2625474 TTCTGTTCTACGACAAAGACCA 59 2620691 2620709 TCTGATCGCACTCATCGTC 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 3 3 6 95 2R 2814317 2816023 CACTTTGACGACTATGCCAC 59 2814241 2814259 CTTCGCGTTGAGATTCTCG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 2 3 6 94 2R 2814317 2816023 CACTTTGACGACTATGCCAC 59 2814242 2814260 TTCGCGTTGAGATTCTCGA 59 NA Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 1 1 1 84 2R 2837198 2837216 TCGAATTGAAGGAGAGCAG 57 2837314 2837332 CAGGCGATAGACTTGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111088 3 1 59 107 2R 3236476 3242809 GTTCCTGCATTCAGATGGT 57 3236387 3236411 GTCCTTAATAATGAGAGTACCAGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111098,FBtr0111062 2 3 59 80 2R 3236477 3238103 TCCAGTTCCCATTATGAGATGG 59 3236418 3236437 TTCACACGGTCATTTAGCAC 58 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911,FBtr0088912 3 2 3 92 2R 3481615 3481633 AAGACAGTACCCACGATGC 59 3481688 3481770 TAGCGTGATCCTGAAGTCAG 59 NA Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 3 2 2 84 2R 3695076 3695094 ACAAATGCTACTCCTGCGA 59 3695142 3695223 GACTTCCAGCACTGAATCG 58 NA Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 2 2 2 84 2R 3721688 3721706 AGTGTGGAGTACCATGTGG 59 3721751 3721829 AAAGACTTCCATCTGATCTGTG 58 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 3 3 3 95 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877562 3877641 CTCGTCCCAAATCTTGACG 58 NA Drosophila melanogaster 61 swif FBgn0050366 FBtr0088771,FBtr0113373 1 2 2 60 2R 4251705 4251723 CTTTGTGCCATCATGTTCC 57 4251663 4251682 TTGAGATTGATCGTTTCCCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299788 3 1 2 83 2R 4463742 4463760 CTACGAGGACGATTACCCG 59 4463309 4463695 TTTGCCGAGCATTCATCTG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 1 9 9 80 2R 4566363 4566440 AGTTGCTCATTGCATCACC 58 4566484 4566502 AGCAGCGTCTTAAACTTGG 58 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 1 2 3 90 2R 4619312 4619680 GCTATTCAATATGCAGTCCGG 59 4619242 4619260 CTCACGGAGAACTTCCTCG 59 NA Drosophila melanogaster 61 sns FBgn0024189 FBtr0088635 2 1 2 84 2R 4720300 4720318 CTGTTCTCGGTGATGTCCT 59 4720365 4722465 GTTCAAGTCCTTTGGTCTCC 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 3 2 12 183 2R 5006307 5006325 CCACATCAACGTCAAACAG 57 5006543 5009250 TCATTATCCTCGGATTGCTG 57 NA Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 2 3 3 83 2R 5649052 5649133 GATATACGTTGCGGTTGTGAG 59 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 2 1 1 87 2R 5708155 5708176 GGCATATGCCTGTATTTCAGTG 59 5708282 5708300 GATCAGCCAAGCACATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0088492 2 1 2 80 2R 5708989 5709009 AGTTTCAGACAATCCTAAGGC 58 5708872 5708948 TTGACACATGAATCTCCAGG 57 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444 1 1 5 97 2R 5805513 5805531 TCTTAGCGTACTGAGCCAC 59 5804409 5805454 TAATGAAGTCTGGAGTGGGTG 59 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 3 2 2 107 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009867 6009885 GGGTGTCAATTTCCACCTG 58 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273274,FBtr0088362 2 2 4 63 2R 6137328 6138397 CATCATCGTTCTGGTGTCC 58 6137283 6137301 CTTGTTTCCTCCACCACTG 58 NA DesignRelaxed Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 1 3 3 80 2R 6338169 6338262 AGGAAACTCTACGAATGCGA 59 6338108 6338128 CGTGGTAACCATTGATGACAG 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 2 2 4 84 2R 6358247 6358956 TGTATCGGACGGATATGACG 59 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0088196 2 2 3 118 2R 7116999 7117017 CAGAAGGACTTCTACCCGC 59 7116522 7116918 GTACTCTGTGCTCCTGTCAG 59 NA Drosophila melanogaster 61 Cct5 FBgn0010621 FBtr0087987 2 1 2 91 2R 8062452 8062470 GTTCGACGAATATGGTCGG 58 8062524 8063251 TAATGTGCGTCTTTATGGCA 58 NA Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 2 1 1 286 2R 8113209 8113228 ACTGTACAATGGCTTTGGAG 58 8112483 8112504 AAGCATAGGGATTACAGTAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 1 2 2 87 2R 8142680 8142698 ATGACCAAGAAGCATCTGG 57 8142798 8142819 ACTTCTTAAGCATACTCTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 2 3 3 92 2R 8212163 8212182 CATACTGTTGCTCCTATCGG 58 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898 3 1 2 93 2R 8219596 8219668 CGACGAAGATTCAATTACTCCA 58 8219721 8219740 CAGGGACAAGGAATAATCGG 58 NA Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 3 1 1 72 2R 8293596 8293616 GGAGTACAATGGCAAATACCA 58 8293708 8293726 CAAGACTCCATCCTGAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 1 2 8 80 2R 8504431 8504969 CTGATTCAGCCAAATACTACTTGAG 60 8505007 8505025 GCAGAATATCCTGCTCGGT 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 2 2 4 115 2R 8745742 8749272 AGGATGTGATTGAAGCAATCAG 59 8745648 8745666 ACGGGTCAGAAATACAGCC 59 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 1 6 6 80 2R 8765938 8765958 AAGAACTTCTCGTTTGACGAC 59 8765815 8765902 GATTAGTTGTCCCATTAGAATCAGG 59 NA Drosophila melanogaster 61 PR2 FBgn0013955 FBtr0087777,FBtr0087776 3 2 2 81 2R 9038329 9038403 CAACGAACGGATCCAAGTG 59 9038266 9038285 CGCTTCCTTAAGGAACTCCA 59 NA Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112741 2 1 2 132 2R 9046594 9047239 CCCTACAAGATGAACGGTC 57 9047335 9047353 GTTTCTCCCTTAGCTTCCG 58 NA Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 2 2 2 80 2R 9089463 9089481 ACGGAGGAACTTTACCAGC 59 9089523 9089607 GGATGTATTGCTGGGATAGCT 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 3 3 12 93 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305322 9306499 AAACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 3 4 4 144 2R 9717363 9718066 CATACAAGTGACCACTGCC 58 9718171 9718192 CTTGTATTTGTCCTTCAGATGC 57 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 1 3 3 80 2R 9837285 9837367 CTCAGATGCAATCATTCCCAC 59 9837225 9837245 ACTTGTCCAGGAAGTACTTGG 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 2 3 3 80 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251531 10251549 TGAGGTTGTACTTGAGGCC 59 NA Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 2 1 1 60 2R 10319430 10319451 AATATCGTTCAGCTAATCCAGG 58 10316228 10316247 GGAATTTGTCCTCGTTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110999 2 1 6 113 2R 10836922 10837074 ACTAGCCTGCCTATTTCCC 58 10836456 10836474 TTGACGCGATACAACTTGC 59 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113082 3 1 5 94 2R 11443854 11443932 TTGATAAGGGCCTATATCTGTC 57 11449322 11449341 TGTGCGTTGAATACATTACG 57 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 2 3 7 92 2R 11545902 11546128 CCTCACAAGCCATGTATCC 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556,FBtr0302555 3 2 3 62 2R 11588903 11588921 CTGGCAGGATGAGACTTCC 59 11588804 11588822 AAAGCCGTGATGAAGAAGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 2 2 5 130 2R 11825287 11825305 AACTACGTGAGCTCTCGTC 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087256 2 1 3 161 2R 11973116 11973561 ATTAGCTCTAAGGAAGGAGGAG 58 11972902 11972920 GGTGGAGACAAAGTTGCTG 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 2 6 6 134 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070704 TCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114473 1 1 3 110 2R 12083980 12083998 TTCGACCAACACTAGTTGC 58 12084072 12086002 CAGTGCCGGAAATCTTCTG 58 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 1 3 5 80 2R 12247594 12247615 TTCGATATGTTCACCAATTGCC 59 12247654 12247762 ATCATTGAAGTGCTTCTCGAC 58 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087098 1 1 3 80 2R 12457023 12457368 GAATCGTCTAGAGCTTCGC 58 12457409 12457430 TAGGCACTGTCTTTAACTTGAG 58 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 2 3 4 83 2R 12645897 12646764 AAGTTACGGCAACGTTTGG 59 12645832 12645853 CACATTATAGTCCGGTGAAGTG 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 3 2 6 100 2R 12896437 12897014 ATCATTGTGAGACCGAGGAG 59 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 2 1 1 157 2R 13553640 13553658 CAACTTCAACAAAGCCAGC 58 13553839 13553859 TCAGGGTATTGGGAATATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086786 1 1 2 80 2R 13991261 13991518 TGTCAGATTTACGCACACG 58 13991199 13991217 GATTCAGTGGCTGACTCAG 58 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 3 2 2 80 2R 14074501 14074522 ATCCATTAATCGTGGATTGCTC 59 14074346 14074460 ACTAGGTATCGCCATACGC 59 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 1 6 6 129 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175124 14175142 ATATTCCACTCGTCCTCGT 57 NA Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 3 2 2 159 2R 14329807 14331168 AACGTGTTGATTTCTCATGGC 59 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086584 3 1 6 93 2R 15048837 15048855 AGCAACACAACGAACAGTG 59 15048910 15048987 CATTGACCTGCTTGAGAATGG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 3 2 4 82 2R 15196009 15196085 CCAATGAGGTGATCTTCGTG 58 15195946 15195965 CAGACCCTTCAATAGACCCT 58 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536,FBtr0086539 3 2 4 194 2R 15338964 15338982 GTTCACATCCAAGCTGGTC 58 15336053 15336071 TGAAGATCTGGCCGAAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 2 3 19 90 2R 15361464 15365132 AGAGACAAATCTGTTCGATCG 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 1 2 2 86 2R 16502070 16502088 TTCAAATGCGTACACTGCG 59 16500968 16502023 GCAATAGACCTCTTTGTCATCC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 3 8 15 89 2R 16911179 16911197 GAGTTAACAGCCAGTTGCG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 1 2 2 80 2R 17372489 17372573 GGTCAAGATTGTTAACATGAGC 58 17372613 17372632 CTGCCCATATGATGTAGTCC 57 NA Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 3 2 2 60 2R 17556971 17557048 GCAAGTCGAACAAATAATGTCC 58 17556932 17556952 CAAGTCTTGAATTTCCTTCGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 1 4 5 94 2R 17956091 17956112 CTACTCATATGTGATTGCCGTG 59 17956164 17956249 CTGGGAATTCAATTATCTCCGC 59 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 2 2 2 62 2R 17974259 17974277 TCAAGAATGCCAATCCCGA 59 17974053 17974071 TGCTATTCAGCTCAAGAGC 57 NA DesignNoJunction Drosophila melanogaster 61 dve FBgn0020307 FBtr0071775 3 1 2 119 2R 18150940 18168184 AAGTGAATCCCAAATCACTTCC 59 18168264 18168282 TGTCGGTCTCGATATTGGG 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 3 4 4 80 2R 18215620 18215706 GATAAATTCCTTCTGGAGAAACTGG 59 18215742 18215762 GTGGAAGATCATCTTCTCGGT 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 1 4 4 172 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA InUTR Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923 1 1 2 152 2R 18587534 18587608 CACGCCTACATATGACCCA 59 18587400 18587418 TATTAGTGGTGCTCGTGCT 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 1 8 8 101 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 3 8 8 102 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611606 18611625 AATGACACGTTGATCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 3 1 1 140 2R 18926492 18926510 TGATCTGAGCTTACGTTCG 57 18924323 18924341 ATTGTACGATGTTGGGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260 3 1 4 162 2R 19487469 19487580 CCTATCAAACGGATACAATGCT 58 19487269 19487290 CACAAACCAACCAGTTTAAGGA 59 NA InUTR Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 2 2 13 84 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564629 19564647 GGACTGTAGAGTCCCTCAC 58 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089503 3 1 3 296 2R 19595996 19596161 CAGTAAGCAAGCAACGAGC 59 19596420 19596439 ACGTGCGTTAACTTAGACAC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 2 1 2 101 2R 19953830 19954095 ATCCCAGAATGCAATCTGG 57 19953664 19953684 CGTCATTGAACAAGTTACTGC 58 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 1 2 2 80 2R 20024090 20024109 GATTTCGCGCTTCAAATACG 58 20023971 20024052 CTGTACTCGATAAAGAAGTTCAGC 59 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273 3 1 2 142 2R 20046598 20046681 GGATATGTGCTTTCTCGAACG 59 20046423 20046441 GCTCTTAACATCTGGGTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 2 3 3 80 2R 20721186 20721206 CTCACATTATCTACCTCCCGG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 3 5 5 81 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770667 AAGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 1 2 8 80 2R 20887588 20887609 CAATTTCTAGCCTATGTGGCAG 59 20885212 20885811 CGAGAAGTTAATGAGCACGG 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 1 3 3 92 3L 213969 214042 ATCTCTTGCGGATGGTGAG 59 214098 214116 TTGTCCGACGATATCACGA 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 1 5 6 81 3L 352342 352363 TATCTCGAGTTATCCGAAAGGG 59 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 2 4 4 81 3L 1326067 1326085 CCTCGAGAACTACCAGAGC 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 stet FBgn0020248 FBtr0072712 2 1 2 80 3L 1488024 1488114 GGGAGCTACTAAGAGATAAATGG 58 1487896 1487916 ATTCCTCGACTGATATTTCGC 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 2 2 3 84 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573758 1574005 CCGAGGTTACTTCTGAGCT 58 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 3 2 5 87 3L 1656738 1656757 ACTGAAGTCTGGTATAGCGG 59 1655701 1656688 GACTAGAGGTTCGCTACCC 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 2 2 2 80 3L 1769509 1769596 TGCCGAGCTTATGAAATGC 59 1769447 1769465 GGCTCAAGGTACTCGAAGG 59 NA Drosophila melanogaster 61 Cpr62Ba FBgn0035279 FBtr0299561,FBtr0299560 1 2 2 99 3L 1825127 1825145 CTGTCTGCTGCATATTGCG 59 1824696 1825064 GTAGTGGAGCCTTTCCTCG 59 NA Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 1 2 2 84 3L 2593492 2593571 GAATGTGGATCGCAGTACC 58 2593619 2593637 TTTAGAGAATCGCTGCGAG 57 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 3 2 2 80 3L 3043324 3043344 TGTGAAGCTATCATTGTCCCA 59 3043385 3043455 GGGCATACAAAGGTGAAGTC 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 1 3 4 80 3L 3054409 3054430 CATAGTATTTCGTCTGGTGCAG 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 2 3 3 80 3L 3150145 3150226 TACTTTCAGGCTTTGTTCACC 58 3150266 3150286 CTTTAGGTCATCGTACTGCAC 58 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 1 3 3 131 3L 3328065 3328083 TGGTGATCCTCAACTTCCC 59 3328178 3328263 CATTCACATCGACCTTGGC 59 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 1 2 2 89 3L 3375959 3375979 GCGGAAAGATTTATATCGCGA 59 3376028 3376104 GCCAACAAGCGAATCTATCTC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 3 4 13 89 3L 3516817 3552793 ATGCTAAAGATGGCGTCAC 58 3552846 3552864 TTAATCTGCCGAAGCTGTG 58 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156 2 1 2 80 3L 3860696 3860716 TTCAGAATAACGCACAGAACC 59 3860754 3860905 CATCCATAGAGGATTCATGAGTC 58 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073175 1 1 2 98 3L 3909033 3909768 AATGAGGGAAAGACCTCCA 57 3908481 3908499 GAACATCTCGGTTAGTCCC 57 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 3 6 6 80 3L 4098072 4098090 AATCTTCCGAGTCTCAGGA 57 4097789 4098029 TACGATCGAACGATAGTTGG 57 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302565 3 1 3 134 3L 4195133 4195153 GGTTCATGTGGAAATTGTCCC 59 4195383 4195854 TTCATACCATTGCGCTGTG 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 3 6 6 205 3L 4418980 4418998 GCAACTATCTGCAACGCTC 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982 2 1 2 80 3L 4883820 4883963 GTGGACATGACTCTGATGTG 58 4884005 4884024 GAACATGTGGCGATAGAGAC 58 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 1 2 5 121 3L 5160148 5161358 CAAACAAATGTTACGGCTTCG 59 5160047 5160065 ATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 3 2 2 94 3L 6173208 6173291 GTGAGTGCAAGGTTTGTGG 59 6173132 6173151 CTCAATAGCACGAAGCACAC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 5 6 104 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583713 TAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 CG8600 FBgn0035765 FBtr0076883,FBtr0300197 1 2 2 145 3L 7327988 7328187 CGCAAATGACCATTGAGCA 59 7327861 7327879 GAAGTTGCCGTAGATGTGG 58 NA InUTR Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 3 2 2 85 3L 7352943 7353034 ATAATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499,FBtr0076776 3 2 7 85 3L 7811310 7846290 CATTAATGGCAAATCCACATCG 58 7811246 7811264 CAACATTCCAGATGTCGCC 59 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738 1 1 2 111 3L 8082677 8082695 TTGAATGGCTCCGATTCGA 59 8082524 8082604 CATTGGCAATTGATGAGTTGG 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 1 3 9 225 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 3 3 3 83 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607901 8607977 CTCCACAGTCCATCATTGC 58 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 3 2 4 106 3L 8738137 8738155 AAATACTCCTACCGTGCCA 58 8737418 8738067 AAACGGATCTTGTCCTCCA 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089492 3 1 6 94 3L 9338160 9339702 GAACCAAACGAATGATCCTG 57 9339757 9339777 TTAGGTTTCCTCTAGTAGGCA 57 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0301858 2 1 3 155 3L 9730319 9730337 TCTCATCGAGCAACTGGAG 59 9729084 9730040 AATTGTAGTCTGGACAAACCCT 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 1 3 8 183 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824111 ATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 1 7 8 94 3L 9817656 9817676 GACGATCAAATAACGAAGCCC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 1 7 8 94 3L 9817656 9817676 GACGATCAAATAACGAAGCCC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 1 2 2 80 3L 9858430 9858449 AAGTTCACTCACCACAACTC 58 9858492 9859425 GCGAGATGAGTCATAGCTG 57 NA Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300239,FBtr0300238,FBtr0300237 2 3 3 60 3L 9966061 9966082 ATTAGCCTCTGTTAGTATCGTC 57 9966195 9966213 CTTCCAGATGAGGAACCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 3 2 2 109 3L 10618183 10618201 GGTCTTCGATGTCTTCCTC 57 10618031 10618110 ACTCAATTGCCATGGTCAG 58 NA Nonspecific Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 1 2 2 94 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626524 10626542 TAAGCACATTAGCCTCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 2 4 5 126 3L 11109614 11109778 CACCAACTGGTACAATAAGCG 59 11109442 11109461 GGAGTCTGGAACAGATCCTG 59 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220,FBtr0076221 3 2 2 103 3L 11143173 11143247 AAATGTGTTGTGGCAAGAC 57 11143088 11143106 CTTGTTGGAGGACAAAGGT 57 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089333 1 1 4 193 3L 11520441 11520571 TTTCTATGCGTAGCTGGCA 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018 2 1 2 87 3L 12194929 12194950 CACCAAAGGGTTATGAAGAAGG 59 12194581 12194881 TGATGGGTATATCAGCGGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075915 2 1 3 88 3L 12735039 12736014 AACCTGCGCAAAGTATTTCAG 59 12736064 12736082 ATCTCCACCGGATAATCGC 59 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 2 3 3 89 3L 12788110 12788128 ATTACAAATCCGCCCATCG 58 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075895 3 1 2 94 3L 13014647 13015546 CACGCTACAAGAAGGAATCC 58 13014572 13014592 TCATAGAGTACTTCTGCAGGA 57 NA Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 1 2 2 107 3L 13407234 13407440 ATATTGCATCTGGTGACGC 58 13407511 13407529 TATCCTTGATGGGTCCTGC 58 NA Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 3 2 2 108 3L 13407234 13407440 ATATTGCATCTGGTGACGC 58 13407511 13407530 ATATCCTTGATGGGTCCTGC 59 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487,FBtr0302488 3 2 2 80 3L 13456649 13456669 CCTCTTTGCTTTCAAACAAGG 58 13456708 13456788 TAAAGAAGCTTCAGACACTTGG 58 NA Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 3 2 2 114 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075457 14075480 TAGTACTCCGTATCTTGGATATCC 58 NA Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743 2 1 2 88 3L 14310425 14359856 GCTAAAGTTGAAGGTGACATCC 59 14359905 14359923 AGTGGAAGGATCAGGAACG 59 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 2 3 3 81 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621437 14621458 ATCGTTGTTTATCATCTGCAGG 59 NA InUTR Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699 3 1 2 99 3L 14770509 14770527 GATCTACGAAGGCTCTGTC 57 14770331 14770449 CATTACTTGTACTGATTCGACG 57 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 2 2 4 95 3L 15301924 15304065 GGATGATTGTGGGACTTTCC 58 15304123 15304141 ATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 1 4 4 88 3L 15964323 15964401 CATTCTAGGTCGAGGCTCC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 3 2 2 60 3L 16016999 16017018 AAATGGATTAAGCCACAGCA 58 16022392 16022410 GACTGAACGTGGCTAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 3 3 6 88 3L 16109265 16109284 ATAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302786 1 1 12 87 3L 16895281 16895488 ACAAATCCAATCTGCAAACCTC 59 16895536 16895554 TCATCCATACGTGGACTGC 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 3 3 5 97 3L 16983972 16984126 ATTCGTAGATGACTCAGACCA 58 16984185 16984203 GATTTCCATCCTGGCTCTG 58 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 3 2 2 144 3L 17548149 17548167 CAAAGACGACAGGATGGTG 58 17547967 17548043 TTGACTTGTGATCCGTATGAG 57 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185 3 1 2 80 3L 17723428 17740789 CCACTACGATACAGAATTGCA 58 17740830 17740849 TCGTGTTAGCCATATTGTCG 58 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 1 2 2 207 3L 18033743 18033761 TTACGTATGTCCTCGCAGG 59 18034086 18034106 TGAGAATATCCAACTCTGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0089387 3 1 2 123 3L 18480858 18480877 CGAAGCACAAGTCTAAGGAG 58 18480328 18480559 CTGATCAAAGCCACCTGTG 58 NA Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 1 1 1 60 3L 18599384 18599402 CAACAGCTGTAGCCAAACG 59 18599491 18599511 ATGGTCTCATTAGTCAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0074994 1 1 2 94 3L 19269802 19272148 GTCTGCTGACTTCATTCGC 59 19272204 19272494 GTAATTATCCTCTGCGCACTG 59 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 2 1 1 65 3L 19807934 19807953 ATCCTCACTGGAACAGTGTC 59 19807818 19807836 GTCTTAACGGGCAACATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0100394 3 1 3 166 3L 19881570 19881647 GAAGCCGAATCAGAACGAC 59 19881422 19881440 CATCGTGCTGGACAAAGTC 59 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 3 2 5 124 3L 20146359 20146377 CAAGATGGGCATTATCGGC 59 20145395 20146274 GAGTATTGTTAGTGTGGCTGTG 59 NA Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 1 2 2 80 3L 20305702 20305789 TTCTGTGCAGCTAAACTTCTC 58 20305827 20305849 TCCTGGTCCATATAGGTTATAGC 58 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 1 2 2 146 3L 20432113 20432189 TACCATCAAGACGTACGGC 59 20431985 20432005 ACGTGATCAATGAAGTTCAGC 59 NA Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 1 2 2 94 3L 20784204 20785235 AAATGCTGGTTATCGTGGC 58 20784128 20784146 CCAGCAGGTGATCCTTCTC 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0078332 2 1 4 103 3L 20959004 20959240 GAGCTGGATAAGGAACAAGG 58 20958920 20958939 TGAAACGAATGGGTACATCC 58 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078313 3 1 5 82 3L 21193150 21193168 CCAAGTCGAGTCTCTACGA 58 21192427 21193104 CTTCACGTGCATATGCTCC 59 NA Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 3 1 1 70 3L 21209608 21209626 GAATCCTTCCCAAGCTGGA 59 21209403 21209422 AATGTCTTCTGTGAGTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0112677 2 1 3 91 3L 21313649 21313667 GAAAGACCTCCTTCCTGGT 58 21313722 21325711 CACTTTGTTCGTAAGCGCA 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421 3 1 3 102 3L 21521991 21522070 TTAAGGTGACGAGGTTTCG 57 21521907 21521925 TTCGTGGACATGCAAAGAG 58 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 2 1 1 70 3L 22279933 22279951 GCTCCTCAGGCATAATGAC 58 22279816 22279837 GGTCTACAAGATCTTCATTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 1 1 1 124 3L 22641779 22641797 GGCCTATATGGATCTCGCA 58 22641943 22641961 CTTTCTGTTGAACCGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 3 1 2 81 3L 22859043 22860503 GGATCAAACCAAGAACAAATCG 58 22860541 22860563 TCAGTCGTCTAGTATCTTCTTGG 59 NA Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078561 2 1 2 82 3L 22939029 22939379 AGATAAAGAAATTGGTTCGGCG 59 22939420 22939440 GTCCCAGAGAATTGGATTGTC 58 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 2 2 3 226 3L 23093411 23093430 AAATACTTTGGCAAGCCAGC 59 23095383 23095401 TTGTGCGCATTGACATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 1 2 2 80 3R 1902 7791 CCGTCAAGAACTTCTACGGT 59 7833 7852 TCTCGTCTCCGTTAAACGAC 59 NA Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 3 2 2 80 3R 1903 7791 CGTCAAGAACTTCTACGGT 57 7835 7853 TTCTCGTCTCCGTTAAACG 57 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0100617 1 1 4 90 3R 151138 151156 GACCACGCTCATCTAAAGC 58 151209 151435 CAACCAATTTCTCAAGGGCA 59 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 2 2 2 67 3R 214104 214189 CTTCCTAAATGAGTCCACCC 57 214219 214237 GCAGCTCAAGGCTTATGAG 58 NA DesignRelaxed Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0112871 1 1 5 80 3R 454057 455895 AAACCTAATGGACAGTAGCCA 59 455937 455955 GTCGGGTAACCCAATTGTG 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 3 3 12 82 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735 3 1 2 116 3R 2190439 2190735 GAAAGAGCAGCCACTAGCT 59 2190341 2190359 CGGAATAGACCGTCGAGAG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 3 4 11 88 3R 2735065 2735083 GATCAAATGTCCGGTCACC 58 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 3 8 9 91 3R 2926913 2926936 GAAGATCAGCTATGAGAAACAGAC 59 2925231 2926863 TCAGATCAAGCGTTCTGCT 59 NA Drosophila melanogaster 61 CG10928 FBgn0040522 FBtr0081746 2 1 1 60 3R 3635488 3635506 TCGATTTAACTCGCTCGCA 59 3635530 3635548 TAAATCCAACACGAACGGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 1 1 1 92 3R 3638249 3638267 AATTCGGAATGCTAAGCGG 58 3638538 3638556 CGTGACCAACTCTTGTACC 58 NA DesignNoJunction Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 1 1 1 139 3R 3737418 3737436 AACCGTTGCGTAAATCAGC 59 3737220 3737238 ATTCCATGCTGGAGGTCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 1 2 4 129 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607992 4608010 TGCTTTGGAGACTCACCTC 59 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922 2 1 2 82 3R 4650604 4650684 TGACACGGAAGATCATCCT 58 4650728 4650748 TGGACTTCTTAAAGATCCCGT 58 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 3 5 5 231 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847651 4847669 TCGATGGGATTCTCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 1 5 14 95 3R 5258552 5269741 TTCAGTTCCGGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0082064,FBtr0082065 3 2 4 80 3R 5348543 5348564 AACTGGCACGAATAATCTTACC 58 5348605 5349933 ATGCCAGAGACTTGATTGC 58 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 3 2 3 91 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367653 5367672 GTTATTCCCGTTGTTGTAGC 57 NA Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 1 1 1 75 3R 5380877 5380895 CTGCTGTCCAAGAAACTGG 58 5380759 5380780 GGCACTCATAGAGACAATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 1 5 9 80 3R 5834567 5835034 TCTACGAAGGTTCAAACCG 57 5834505 5834523 GTCGGTGGATATCTCAGTG 57 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 2 2 2 105 3R 5988996 5989014 CTCCTGTCTAATGCAGCCA 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 2 5 5 80 3R 6041340 6042793 GGGTGGATGAGATATCCGAG 59 6042836 6042854 ACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300078 2 1 3 122 3R 6639314 6639987 TCAGAGCAGCAACCTACTG 59 6639210 6639228 AGTAGTCCAGTGCCTTGAG 58 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100465 1 1 4 219 3R 7388840 7388861 CTAAATGCTCTGATAACCTGGA 57 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 3 2 2 111 3R 7571164 7571182 TCACCACTACTCACCACTG 58 7571007 7571092 AATAGTTTCCAAAGTAGCTCCC 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 2 2 6 114 3R 7628402 7631764 CGATACTCTTATGTATGGTCGC 58 7628309 7628330 ATTCCTTTGCTTATCTTCCTGC 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 1 2 2 141 3R 8509987 8510005 TATTTCAAGCGGTACCTGG 57 8509805 8509882 AAACGAGGCTCATTATCCG 57 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114501,FBtr0113226 2 2 6 82 3R 8522009 8522792 CATAGTCATGCAGGTGGCT 59 8522838 8522856 CCCGATTTCGATCCTTGGT 59 NA Drosophila melanogaster 61 CG7381 FBgn0038098 FBtr0082727,FBtr0082726,FBtr0301219 3 3 3 179 3R 8795252 8795360 GAAGAAGTATGGCAGCAGC 59 8795021 8795039 TGATCGAACTCGTACTCGC 59 NA Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 2 3 3 92 3R 8825929 8826123 ATGCTGACATACATTCTGGAC 58 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082710 1 1 2 102 3R 8898261 8898392 GCAGATTGCATGATATAGCCA 58 8898455 8898474 GCCAATTCACAGAATTCCGT 59 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082742 1 1 3 84 3R 9130143 9130162 CAAGTTTCGACTGCGATCTG 59 9130203 9135876 ATGATTGATCTATCTACTCCATCGG 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 2 4 6 154 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 60 3R 9210262 9210281 GGAGGTTGACATTCCAATCG 59 9210393 9210412 TTGCTTGGGATCAAAGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 2 3 3 98 3R 9485362 9486072 ATGGTGAAGAGATCACCGAG 59 9485283 9485301 TCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 2 5 5 80 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796281 9796299 TCACCCATTTCTTCCCGAC 59 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082885 1 1 5 149 3R 9905365 9905964 CTATCAACTGCGATGATGGC 59 9906076 9906094 TGTTCTGGTAGTCAACGGG 59 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0301351 2 1 2 94 3R 10039718 10039736 GACAAATGGCTACGATGGC 59 10030144 10030487 GGAAGATGCCAACTATTGTATCC 59 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 2 3 3 98 3R 10142500 10142518 GCCGTTTGATGAAGGTCAC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 3 2 2 99 3R 10156792 10166951 AAACGCAGGTAAAGATCTGG 58 10156712 10156730 GCATTCGAGGATTTGTGCT 58 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 2 2 4 63 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055560 11055578 GTGTTTACCGTGGACAGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 2 5 8 102 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110974,FBtr0083229,FBtr0083231 3 3 6 113 3R 11922943 11922961 TAGCATCTGTGATGACGCA 59 11922786 11922866 GAAAGCGATTCTTGAGCCC 59 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0113241 1 1 2 97 3R 11998230 12003271 TTTGTCTTCCAGATTGCGC 59 12003330 12003350 GAGGACTGACTAATATTGCGC 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 3 2 2 80 3R 12187838 12187914 ATCTCCTAATTGGTCAGCGG 59 12187777 12187795 CCAGAAGATCGGGTCTTGG 59 NA Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 2 2 2 98 3R 12195609 12195627 CCAATCGGCCAATACTGAG 58 12195389 12195549 ATACGCACGCCTTTATTAGTG 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 1 3 5 133 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391564 12391582 CTGATCTCCCTTGTGTCCC 59 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 3 4 4 81 3R 12474342 12474429 GGTAGACATTAAACGCTATGCC 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 1 3 3 88 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901830 12901850 CACATTCAGTTCATCCCTTCG 59 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 3 3 3 109 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901809 12901827 GTAAACCTCTCGCTCCTCC 59 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 3 2 4 150 3R 13308945 13309028 TAAATGTGAATGAACCCGCA 58 13308814 13308833 TTATTCAGATCGATGCGTCC 58 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 1 3 3 80 3R 13953370 13956130 CATTACTGGTTCCATCGAATCC 59 13956171 13956189 CAATGTGACAACACGGGAC 59 NA Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 3 3 3 115 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204583 14204602 CTCGGTCTTCACAATGTCAG 58 NA Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 2 1 1 61 3R 14210036 14210056 CTGAATACGGCATTTGGATGG 59 14209907 14209925 CTTCCCAGGCTTGATTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 3 1 1 177 3R 14322982 14323593 CCAAGGATCAATGGCAGTG 58 14322823 14322841 AATTCATAACGCAGCCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775,FBtr0083684 3 2 2 80 3R 14562183 14562264 CAAGTAGCAATGAATCCACCTC 59 14562124 14562143 TGGATCCCTTACGCATATGG 59 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 1 2 5 94 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750866 14750886 AGTCAAGAATATCCGTCTCAG 57 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0112924 2 1 4 97 3R 14845032 14845050 TTCCGAATCGGAGGATGAC 59 14845109 14846659 GTTGATACCTGTCCACAAAGG 59 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 1 2 2 80 3R 15708429 15708449 TATGATCCTGGAGATGACTGC 59 15708487 15708575 TCGTACTCGTACTCGATATTAGC 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 2 2 5 149 3R 15842346 15842364 CATTAAGGAGCGAACGGGA 59 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0083871 1 1 2 164 3R 16078534 16114645 ATGTCGGAAGGAACAACAC 58 16114771 16114791 TCGAATTCCACGAGTATTGAG 58 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718 3 1 3 80 3R 16685076 16685155 AAATAGAGCTCTAATGGTACCC 57 16680098 16680117 ATACTTTCGTGCACAATCGA 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 2 5 16 164 3R 17004777 17004798 CTTATGAACTCCATGAAGGTGG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 3 5 16 165 3R 17004776 17004797 CCTTATGAACTCCATGAAGGTG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084064 3 1 22 81 3R 17200833 17200852 ACAGTCCCAGAACTACAGTG 59 17189596 17200791 TTTGATCTTGACTTGAGCCTC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084070 2 1 22 184 3R 17200938 17200956 GACGACAGCTACTTCACTG 58 17184782 17200790 ATGAACTGACCTTGAGCCT 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084063 2 1 22 92 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17179448 17200793 AATCGAATTCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084066 1 1 22 87 3R 17180806 17200794 ACAGAGGCTCAAGAACTGG 59 17180737 17180757 GGTTCTTAACGAACTTCTCGT 58 NA Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407,FBtr0100089 2 2 2 82 3R 17564657 17564739 GTCCAGTCTTTGGAAATTGCA 59 17564595 17564613 AGGATAGCCACAACGTGAG 59 NA Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0084169 1 1 2 102 3R 17801769 17821253 TGAAATATCCCTAGAACGCG 57 17821316 17821336 TTGCTCCTCGATATTCAAGTG 58 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0084184 3 1 2 127 3R 17856294 17856370 GTACGACAATCCCTTCTTCC 58 17856186 17856204 GTCCATGGTAGATGCACAG 58 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515,FBtr0299516 3 2 2 85 3R 18239171 18239254 CAGTCCAAGACGTAACTATCGA 59 18239300 18239318 TCATGTTGAGGCTGGAAGG 59 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485,FBtr0084256 3 2 2 119 3R 18304659 18304677 AAGTGTAGCCAGAATGCGT 59 18304758 18304835 GGCAATCGATTCATCATAGCA 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 2 4 4 147 3R 18446765 18446783 AAGAAGTCCACTAGCAGCA 58 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0302856 1 1 3 95 3R 18515731 18515811 TCGATAATTCCATAGAGCCCA 58 18515656 18515674 CATCCTCGTGTCCATTGTG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392,FBtr0084393 3 2 7 83 3R 19014841 19017425 GAATGAGAGCTTCTGTCGC 58 19014776 19014794 CTAACATGTCCACTGCTGG 58 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 2 2 2 80 3R 19057608 19057627 TCCAGTCACCTATGTGACAG 58 19057478 19057567 GGCACATTGAAGGTTACATCC 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089716 1 1 3 115 3R 19139473 19139491 ATCCTCAGACCTTCTTGCC 59 19139270 19139394 GGTGGGAACTTCTTTGAGC 58 NA Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445 1 1 2 85 3R 19538851 19538940 GGAGAAATATGACTTTGATGGC 57 19538787 19538806 TGGTGCTCTTATTGATGCTC 58 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 3 3 3 87 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688920 19691287 GCAAGTAACCATTGTAGCCG 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 2 2 3 164 3R 19762736 19763157 TACCATCTGCTTGCCTCAG 59 19762255 19762273 GATATCCTTCTCGGAGGCG 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0300963 1 1 5 89 3R 19803254 19803272 ATTGGAGCTGATCTCCAGC 59 19803324 19803403 ACATACAAACCAGGCAAAGG 58 NA Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084595 1 1 2 136 3R 19861436 19861456 ACTATCTAATGCAGCCCTCTG 59 19860736 19861338 GAATTGCCTCAGGTGAGGA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100624,FBtr0100638,FBtr0084684,FBtr0100627,FBtr0100634,FBtr0100622 3 7 18 80 3R 20521111 20521132 GCTGATCAAGAAATGCAAATGC 59 20521842 20528758 TCACGAGTGATATCACCTAAGTC 59 NA Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 2 2 2 169 3R 20767855 20767940 ATGCCATACGAAACAAACCC 59 20767705 20767725 GATAAACGACTTGTACTCGCC 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 3 5 6 88 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180028 21181956 GTGATTTGTGCCATATAGCGA 58 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 1 5 5 60 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 1 2 7 113 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535134 21535152 TTCTCATCCGATCCGTCAC 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 2 4 5 131 3R 21870340 21871201 ATCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 3 4 5 132 3R 21870339 21871200 GATCATTGGGCAACAGATCC 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 1 3 9 94 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699634 22699652 CATTGGATACGCCAACAGC 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 3 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809930 22810007 TTAAAGATTTGGCTCTCGCT 57 NA Drosophila melanogaster 61 woc FBgn0010328 FBtr0085178 1 1 2 121 3R 23088041 23088059 CCAAGACACCCGATAACGA 59 23087655 23087956 TACTCCATCTGCAGTTGGC 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0112583 2 1 3 81 3R 23875957 23875975 AGCAGTACCAGATCCACTC 58 23876020 23901408 TGGAATTGTTCCTGCTTGG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 2 4 4 110 3R 24146990 24147102 TGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0085287 1 2 3 113 3R 24166357 24166375 TGTGATATTCCACCGGGTG 59 24166452 24167103 AAGCTCTCATCCTCGAACG 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0300337 3 1 4 98 3R 24351662 24351680 ACCTATGGTGGATGCAAGG 59 24348972 24351600 GTTGGGTTCCGCTTTAAGC 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 2 3 6 149 3R 24637861 24638120 GTTATGGAAAGTCCAGGTCG 58 24638450 24638468 CATGACCACTTGCTCTTCG 58 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289996 1 1 2 80 3R 24694639 24694657 GATGGTTATAGCACGCTGC 59 24694701 24694830 CTGATGTGGAGCAGAAGGT 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 1 2 13 80 3R 24728518 24745223 ACGACTATCTAACAGCAAAGC 58 24745265 24745283 GATGGAGAATGTCTCCGGT 58 NA Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 2 1 1 147 3R 24943577 24943596 TACTAATCGGCATCGAGACC 59 24943768 24943786 ATGGTAGACTGCTGGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 2 3 3 103 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951602 24951620 CAGATGAGGCGACTATGCA 59 NA Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 3 1 1 191 3R 24973675 24973693 CGACGAAGACGTCTTTGTG 59 24973432 24973450 AAGGGTCCAATGAACAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 3 3 4 81 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085444 2 1 5 85 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423187 25430242 ATTCCATTGCCTTCACATGG 58 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 2 4 5 82 3R 25857056 25857153 GCCATCTACAGATTCTTGCG 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 1 5 5 80 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871276 25871294 GGCATCAGATACTGTCCCT 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 3 5 5 97 3R 26212310 26213195 GATTTCAAGTGCTCCCTGG 58 26212231 26212249 TCCTCCTGGATCTGATTGC 58 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 3 2 4 163 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26274930 26275548 CGTCATTAAATGCAGATTCGG 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 2 3 4 80 3R 27006535 27006772 ATATACCGAATGTCTACGTGAGG 59 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816,FBtr0085815 2 2 2 84 3R 27440094 27440113 CTATTATCTGGATCGCGAGG 57 27440159 27440234 GTCAAACACCTTTATGCACG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 3 3 22 144 3R 27757911 27757929 TGTATCTGTGCCGACACAG 59 27707585 27757803 GCTTCCGCGATTATTGGTC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 1 8 8 166 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158059 TAAACCAATTGCTTGCAGC 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 1 5 6 198 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 1 4 4 80 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383623 383641 GTAGAACTGTGCAACGAGC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 1 7 7 100 4 473429 473449 GATTTCTGGAAATGAGGCCAG 59 473511 473610 CGTAGTAGGCTTGCTTCCA 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 3 3 5 117 4 886473 886570 CACTTGGCAATAACCGCTC 59 886374 886394 TGGTATATCGGATGATAGGCC 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 2 2 5 80 4 1040636 1042882 CCATGTGTTCTAACGAAACTG 57 1040576 1040595 GGTTTCTCCTCCTAAAGGTG 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 3 4 7 180 4 1080190 1080208 AACACAACCTCTCAACAGC 58 1079961 1080047 ATGAGAAGAGTCCATTGCAG 57 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 1 5 8 93 4 1128886 1128908 GATACGTCTATGCTTTACGACAG 59 1128960 1129108 AACCTGTTCCAATGGAAGGT 59 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 2 2 4 146 U 1183496 1184087 GACTTCGTGTTGTGGTACC 58 1184197 1184215 ATGTATAGTACTCCGCGGG 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 1 8 8 85 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396249 396333 ACTCATTGTGAGCCAAGGA 59 NA Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299511 2 1 2 151 X 715999 737159 GAAGCCGAAGATAAGGTGC 58 715866 715884 GAACAATGGTTCTTGGCCT 58 NA Drosophila melanogaster 61 futsch FBgn0259108 FBtr0112628 3 1 2 151 X 1308711 1321719 GCTCAAGGGATTCCTCTCC 59 1326802 1326820 CCTCCGTGACCAGATTCTC 59 NA Drosophila melanogaster 61 CG3740 FBgn0023530 FBtr0070283 2 1 1 193 X 1562841 1562859 GCCTACAAGATGACAAGCG 59 1562603 1562621 ACAGTGTTAAGCACAGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815 2 1 2 84 X 1571090 1571178 AACTATACGAGATTCGCCCT 58 1571025 1571043 GATATTTGCGTGGTGACGG 59 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 2 3 3 83 X 1674790 1674809 CTGAAATAGTCTCCAGGCGT 59 1674855 1675765 ACTGATATGCTGTGGCCTG 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 CG42527 FBgn0260432 FBtr0300856 3 1 1 167 X 1896368 1896386 GCTCTCCCACATACCAGAG 59 1896623 1896641 GTATCAGGACCAGGTGGTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 trol FBgn0261451 FBtr0112811 3 1 8 91 X 2385413 2385431 CACATATGTTTGCGAGGCT 58 2384864 2385358 CAACGTCGTTATAGCGCTC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 3 7 12 81 X 3215179 3215197 ATATCGCTCCGATTCGGAC 59 3215239 3219969 TTCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070740 2 1 5 85 X 4959934 4960111 AATAGTCTCGACGCCTACG 59 4960160 4960178 GCAAAGGTGCCAATATCGA 58 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 3 2 3 125 X 6263370 6263389 TGGAGTTTAAGTTCAGCTGG 57 6263476 6263564 ATACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323 1 1 6 80 X 6470592 6470830 GGCAACTCTTGGTGAAGAC 58 6470874 6470892 TGGTGTTATTGGTGGTGCT 59 NA Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 2 2 2 90 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492629 6492717 GACCAAACATCGTGAAGCT 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 2 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 3 2 2 83 X 6661146 6661227 GGATACAGCGAGGATAAACTG 58 6661270 6661290 CAAATGGTTTACAAGCTGCTC 58 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 3 3 6 106 X 6680839 6681140 CAAACGAATCGGGTTTCGT 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 1 5 6 105 X 6701674 6702857 CAATTATTCCACGTTTGGGTC 57 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 3 2 2 60 X 6964929 6964949 GAAATCCCTCAGATACTTCCG 58 6965439 6965457 GAATTCCGGTACGTAGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168 3 1 3 174 X 8137928 8137947 CTATGAACTTGACGGGACAG 58 8138084 8140136 TCGTAGGATCCTCCTTTGG 58 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 2 2 2 80 X 8318010 8318028 GAAGAACGAAGCCAACAGC 59 8318066 8318151 CTATGAGAGGAACTTAAACGATCTC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 3 4 6 89 X 8478535 8478553 ATACTCGGAGATCCAGTCG 58 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071294 3 2 6 118 X 9003011 9005126 CAATCGCAGATTTAATCCAGC 58 9005449 9005467 GAATCTGTCGGATGAGGTC 57 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112689 2 1 4 102 X 10416905 10416923 TCTGCGATTCGCTACTCAG 59 10413796 10416840 ATGGGTTCACTTGTTCTTGC 59 NA Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 2 1 1 75 X 10733432 10733452 TGCTCAAAGGATTTGGATGAC 59 10733546 10733564 TGATTGTTGATGTGGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390 1 1 2 80 X 10942568 10942587 GTATCAACAACGACCTGGAG 58 10942628 10942988 GGACATCCCGATATCTAAGGA 58 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299532 3 1 2 80 X 12425106 12425125 GGTTACTATTCCGGTCTGGA 58 12423647 12425065 GATGGCAATCTCGAAGTACAC 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 1 2 5 84 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483127 12483145 AATCACTAACTGGTGTGCC 57 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 3 6 6 86 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545564 12545584 GGTATGATCGAACCGTATGAG 58 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 1 3 3 80 X 13221901 13221919 CAAGCCACGTTACATGGTC 59 13221963 13222197 CTCTTCTTGATGCCCTCGA 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073794 3 1 5 106 X 13231568 13231586 TCCTCTATTTGCAGCGGTC 59 13230355 13230373 TTCTCGGCGTTGTTTATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 82 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 1 2 10 80 X 13490774 13494115 ATGAAGAGTACACAGGAGAGG 58 13490714 13490732 TCAGCTGATCATCGAGGTC 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 3 3 10 80 X 13489088 13489107 AAGTCGCCTCCAAGTATGAG 59 13488932 13489048 TATTATAGCCACCCTCGAAGAG 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 3 4 4 115 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641988 14642006 AAGTAGCAGGGATCGTTGG 59 NA InUTR Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991 2 1 4 112 X 14724369 14724473 CTCTGTTCGCCATACTACGA 59 14724276 14724294 TTGTACGTTAACTTCGCCG 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 2 8 8 130 X 14825229 14825248 AAGCAGATCGAGATTGAGTC 57 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 1 8 8 128 X 14825231 14825249 GCAGATCGAGATTGAGTCG 58 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983 1 1 2 88 X 14989239 14991499 TCAAGCAGGCACTTACCTC 59 14991551 14991569 TTCCTGAAGACTATCCCGC 58 NA Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 3 3 3 209 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377410 15377428 CTCCTATGACTCTGCTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 2 2 2 106 X 15691536 15691556 ACGGATTTCACATGTCTTTCG 59 15691385 15691472 GTGTAGCCTTCTAATATCAGCAG 58 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 3 2 2 80 X 15782410 15782428 TTAAGTGCCGTGGAAATGG 58 15782273 15782293 CAATAGCTTACCAACCAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 3 3 3 106 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802261 15802280 TCTTGCGTACTGATTTGCTC 58 NA Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 2 2 2 195 X 15837144 15837163 ATCTAAGGCCACCTCTACGA 59 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 3 4 4 81 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 3 2 2 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 3 2 2 107 X 16312124 16312143 TTGATCCGTGTGATCATCAC 58 16311920 16311998 AGTATCGCCCTTGATCCAG 59 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074302 1 1 2 104 X 16313073 16314091 TATCCCTTCGGAACTCCCA 59 16312987 16313006 GTCCTCATCTGTTCCAAAGC 59 NA Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 1 2 2 80 X 16576146 16576244 TCCACGATATCCTGTATCTCG 58 16576086 16576104 AGTAGTTCCGGATGTCCTC 58 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 3 4 4 81 X 16602455 16602473 TTCTGCCCACAATGAATCC 58 16602516 16602595 CGGGCATTATATCTTCCTTGG 58 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074341 1 1 2 126 X 16778641 16778736 CGATCAATCCCACGTTCTC 58 16778826 16778907 TACTGCAGTGCCTCATAGG 58 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 1 2 6 80 X 17796055 17796077 CAAGTCGAGATCAATACGATAGC 59 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 1 2 2 84 X 18374510 18374585 GAATGTGACCAATCGTGCC 59 18374444 18374462 AAAGGATGCATTGCACTCG 59 NA Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 2 2 2 92 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584937 18584955 TGTAGGTCATCCCGAACTG 58 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 3 4 4 80 X 19465918 19466009 TCGAGAATAAGATGGACGCC 59 19465857 19465877 TATGCTTCTCGTGTTTCATGC 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089642 3 1 2 191 X 20299295 20299313 GTGTCTGTCGATGCATCAG 58 20299006 20299080 AACTTAATGTCGGGATCGC 58 NA Drosophila melanogaster 61 CG1812 FBgn0031119 FBtr0077313,FBtr0077312 2 2 2 80 X 20385199 20385384 GATAAGCTTTACATCTCTGGTGG 59 20385424 20385442 GACTTCCGTCTTTGTGTCG 58 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112571 3 1 5 132 X 20655400 20655418 CCTCTTCCTGAAGAAGCAG 57 20647267 20655307 TAAGATTGCCTGAAAGAAGAGG 58 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 1 4 4 98 X 21313519 21313538 GATTAGGAACGGGAACTGGT 59 21312773 21313461 CGGTAAGATCAATGCAGTTACC 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 1 4 4 98 X 21313519 21313538 GATTAGGAACGGGAACTGGT 59 21312773 21313461 CGGTAAGATCAATGCAGTTACC 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524 3 1 5 102 X 21907202 21907448 TGTCAATGGAAGGGTTCGA 59 21907514 21907532 CAATAGCAACTCTCCAGGC 58 NA Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301619 2 1 2 231 X 22397740 22406456 AAATCAGAGTTCCAAGACCC 57 22397528 22397546 GTGAAGAGCTCCTGATCCT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 tRNA:G3:35Be FBgn0011866 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD9b FBgn0082917 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-280 FBgn0067713 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31143 FBgn0051143 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32761:Psi FBgn0052761 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:S:UCN FBgn0013706 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1192c FBgn0082999 FBtr0113564 3 1 1 64 X 17038248 17038269 CCAATCTAATTCTGCATAGTGG 57 17038205 17038224 GATGGTGATTGTTCTGGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111190,FBtr0111189 1 2 2 60 X 22363899 22363920 GACATTCTTATCAATAACGCCG 58 22363860 22363878 CTACCGACATAGTCAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 3 1 1 146 X 21940540 21941578 GGCAAGTTCTTTCGGATCC 58 21940412 21940430 GGCAGTCCACTAGCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 1 2 3 192 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077431 21077449 TTTGAGTTGGGTAGGCTGG 59 NA Drosophila melanogaster 61 CG1724 FBgn0031164 FBtr0077257 2 1 1 60 X 21073782 21073800 AGAACGATCTAGGCAGAGC 59 21073740 21073759 ATATCGCCTGATCCCATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077242 2 1 2 91 X 20913642 20913660 ATTTACACGGGTCTCATGC 57 20914747 20914765 GGATCGTCGAACTTGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG1304 FBgn0031141 FBtr0077271 1 1 1 61 X 20835754 20835772 ATAACAACCAAGTGGTGGG 57 20835711 20835729 TGGATAGCTCGTTCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 1 1 1 82 X 20606740 20606821 GATTAAACGGCGTACGGAC 59 20606676 20606694 AAGCAGGATCAGTGTCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17068 FBgn0031098 FBtr0077341 3 1 1 60 X 20121736 20121754 ATCACCATTGGGTCCTTCG 59 20121694 20121712 GCATGTACTTCTTGGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34332 FBgn0085361 FBtr0112534 3 1 1 91 X 20035245 20035319 CTTACACGGAGGAGATCCAG 59 20035367 20035391 GTACAGTATTTCACATTCCTTCTCC 59 NA Nonspecific Drosophila melanogaster 61 skpC FBgn0026175 FBtr0074797 3 1 1 60 X 19710463 19710481 ATCAACCCACCTTGTTCGA 59 19710505 19710523 ACTAGGCCCTTGATCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ranbp21 FBgn0031051 FBtr0074759 1 1 1 107 X 19545510 19545528 CATTGGTCACAGACAACGC 59 19545336 19545440 CTAGCTAGCGTCTACCTCTG 58 NA InUTR Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 2 2 2 60 X 19512468 19512486 CTAGCTAAACGCAACTTGC 57 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14210 FBgn0031040 FBtr0074740 3 1 1 116 X 19510428 19510510 GCCCAAGCAGAAATTTAGCA 59 19510589 19510607 TCCTTGATCTCCTTGGAGC 58 NA Nonspecific Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731,FBtr0074732 2 2 2 68 X 19492187 19492206 GTATTACGATACGTTCGCGT 58 19492235 19492482 CCTTTGGCATAAACATTCTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 1 5 5 80 X 19457156 19457177 CATCTCCAAGTACCAAATGCTC 59 19457035 19457116 TCCTTCCAAATCTTGCACAG 58 NA Drosophila melanogaster 61 Hs3st-B FBgn0031005 FBtr0074676 3 1 1 80 X 19143293 19143312 GGTCTACTTCTCCTACAGCT 58 19143354 19143788 AGATTGCGTAAGTTGCTCTG 58 NA Drosophila melanogaster 61 Mec2 FBgn0030993 FBtr0074669 3 1 1 117 X 19083572 19083684 CGTTGAGATCAAGGATGTCTC 58 19083763 19083781 GGACTTCTTCTCACCCTCG 59 NA Drosophila melanogaster 61 CG7058 FBgn0030961 FBtr0301153 3 1 1 80 X 18702491 18702574 ATACGACTCAAGAAGTTTGTGG 58 18702613 18702633 GGGATTGATGCACTGTATGAC 59 NA Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 1 1 2 79 X 18641978 18642089 GGGCAGTCATCTTAGTGGA 58 18641917 18641935 CTCCATCTTCCTGCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Wnt5 FBgn0010194 FBtr0074623 1 1 1 60 X 18397978 18397997 GGCTACTATCAGAACGAGGA 58 18397937 18397959 CGGTATCTGTTGGTTTAAGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 3 2 2 81 X 18392029 18392048 CAAGGTCATCAGGAACAAGG 58 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 3 2 2 81 X 17974381 17974459 CTTTCACAGTCCGAACTATGC 59 17974320 17974338 GCAAGAGGACACAATCGAG 58 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 2 3 3 80 X 17536257 17536344 TCGAAGAGGATACCAATACTGAG 59 17536199 17536218 AGAAGAAGTCCTTCAGTGCC 59 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 1 2 2 80 X 17497495 17497738 AACAAAGAGGGTCTCTTGGA 58 17497780 17497799 AAGTTGAGTGGATCCAAGGT 59 NA Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 2 2 2 99 X 17320860 17320879 CTCTAACCCGTCTCTGTGAG 59 17320940 17321461 ACAAAGCGGTATAGTCTGGG 59 NA Drosophila melanogaster 61 CG8661 FBgn0030837 FBtr0074444 3 1 1 115 X 17178385 17178465 CGTAAATGCATTGGTGGCT 59 17178288 17178306 TGTAGGTCGTACTCAGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074381 1 1 2 126 X 16973031 16973108 ATTTGGCAAAGCTATGCGA 58 16973198 16973216 ATGGTCAGGTATTTGCTGC 58 NA Drosophila melanogaster 61 CG13005 FBgn0030794 FBtr0074334 1 1 1 153 X 16698013 16698109 TAGTCATCGATCGAAAGCG 57 16698226 16698244 GATGGTCTACCCACTTTGG 57 NA Drosophila melanogaster 61 CG9125 FBgn0030793 FBtr0074352 1 1 1 107 X 16696669 16696687 GAGGCAGAGGAGTTCATGG 59 16696493 16696599 TTTGAAGTCAACTGGCTCCT 59 NA Nonspecific Drosophila melanogaster 61 mRpL22 FBgn0030786 FBtr0074330 2 1 1 89 X 16678368 16678461 CAGAAATGCTTATGTCTGCCA 59 16678512 16678530 GACATTCCGCGAACAAAGG 59 NA Drosophila melanogaster 61 CG32572 FBgn0052572 FBtr0074324 1 1 1 134 X 16620480 16620498 CAGATCCACTGATCCCTGG 59 16620596 16620672 AACTTGCTAGCCACTTTGG 58 NA Drosophila melanogaster 61 CG8939 FBgn0030720 FBtr0074138 3 1 1 157 X 15893009 15893088 CAGCTGCAGGTACAAATGC 59 15893209 15893227 CTTGAACCAAACGGGAACG 59 NA Drosophila melanogaster 61 PGRP-LE FBgn0030695 FBtr0074183 1 1 1 108 X 15696002 15696023 CAACTGCCTGTTAAATATGTGG 58 15695628 15695718 ACTCAATGTGGAAGCACTG 58 NA Drosophila melanogaster 61 RpL37a FBgn0030616 FBtr0074027 2 1 1 120 X 15033098 15033116 ACAATAAGACGCACACCCT 59 15032931 15033014 TTCACGGACCAGTTGTAGG 59 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073981 3 1 2 80 X 14771623 14771642 TCGGCATGAATTTCTATCGC 58 14771333 14771581 CATACTGACGACGTATGACG 58 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0100150,FBtr0073990 2 2 4 70 X 14725638 14725656 GATACGAAGTGGAGCTCGA 59 14725493 14725512 GATTCTCACCACACTTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943,FBtr0073944 2 2 2 82 X 14480584 14480602 CTGCTCTTCATATTCGCGG 58 14480460 14480542 GTCACCTTGTTCATAAATCTCGG 59 NA Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 2 2 2 107 X 14117986 14118070 CCAGAACAATTACAGTTCGACC 59 14118138 14118156 TGTTGCGTCATGATGTCCT 59 NA Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 1 2 2 80 X 13779523 13795523 CCCATAAGGTGGTCCTCTC 58 13779461 13779481 TCACAATTAGATGTCCTTCGG 57 NA Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 1 1 1 98 X 13650529 13650617 TGAACATATCATCAAGTGCCC 58 13650451 13650469 TTGGCATCACTTTCCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 2 2 2 80 X 13608754 13608861 GTCAGATTACTCAAGCGACG 58 13608902 13608922 AGATCGGATGTCGTTATCGAG 59 NA Drosophila melanogaster 61 CG1662 FBgn0030481 FBtr0073776 3 1 1 70 X 13282523 13282541 ACATCAGTGCCTTCTTCGT 59 13282575 13282593 GATCTCCTCCCACACTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 83 X 13268352 13268370 CATGGAATATGCCGTTCGC 59 13268417 13271907 AATGGCTTCTTGACACCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Syt12 FBgn0261085 FBtr0073767 3 1 1 80 X 13257499 13257625 GGTTATATGGCCAGTATACAATCC 59 13257664 13257682 GTCGATGGTATCGAAACGC 59 NA Drosophila melanogaster 61 CG34411 FBgn0085440 FBtr0300364 3 1 1 80 X 13061249 13061267 GCTGGCAATCGATTATCCC 58 13060211 13061208 GTTCTCGTTCAAGTGTAATCCT 58 NA Drosophila melanogaster 61 CG4332 FBgn0030456 FBtr0073726 2 1 1 98 X 13049933 13049953 GCTACCAAGGATATTGACGAG 58 13050012 13050110 GAAGAGCATATGGATGCTGG 58 NA Drosophila melanogaster 61 CG15730 FBgn0030395 FBtr0073667 1 1 1 60 X 12388699 12388718 TCCATCACCACTTCCATCTG 59 12388658 12388676 TCATTGCTATCGCCATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32651 FBgn0052651 FBtr0073672 1 1 1 60 X 12300702 12300725 GATATTAAGAAGTCCATTCGACCC 59 12300665 12300684 TTAGCATAAGGACCCTACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Usp7 FBgn0030366 FBtr0073641 1 1 1 80 X 11919199 11919217 AGCTGCAGTTCTTCATGTG 58 11919081 11919156 TGATGGTGCCCTTAAATGTG 58 NA Drosophila melanogaster 61 Tango4 FBgn0030365 FBtr0073622 1 1 1 85 X 11915235 11915253 ATATTCCGCTCCCTGAAGC 59 11915300 11915379 AACTTCTCTAAACGTTCGTCG 58 NA Drosophila melanogaster 61 CG10362 FBgn0030358 FBtr0073590 2 1 1 80 X 11823534 11823755 AACGCTTAGGGTCAAACAG 58 11823472 11823491 AAACTAATTGACCAGTGCGT 58 NA Drosophila melanogaster 61 CG1578 FBgn0030336 FBtr0073607 1 1 1 80 X 11704487 11704575 ATCGATTCGATTATGAGGAGAC 57 11704428 11704447 TGTTCTCGTAATTCCATCGT 57 NA Drosophila melanogaster 61 CG15221 FBgn0030331 FBtr0112979 2 1 1 112 X 11628647 11628665 GTTCAGTTTGTGCGGTGAG 59 11628741 11628831 TACCAATCGCCATAGCTGG 59 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073532 2 1 3 123 X 11572293 11572443 ACGGAAAGATGAGTCCCAG 59 11572188 11572206 GGTTCGGTGTTACTTGTGG 58 NA InUTR Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073503 2 1 2 107 X 11373131 11373149 AGAACTCGCGTAATGTGGT 59 11373217 11375566 TCGCAGTCTCCAATAGAATCTC 59 NA Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497,FBtr0073498 2 2 2 60 X 11338678 11338698 ACTTTGTGATGTACTCCTTCC 57 11338716 11338738 TCTATATCGATGTCGGCTATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 1 3 3 236 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429 1 1 3 185 X 10986741 10986821 CTCGTATTTCGCTTCGTCC 58 10987087 10987105 AGGGATTCTTCAGGTAGCG 58 NA InUTR Drosophila melanogaster 61 CG32669 FBgn0052669 FBtr0073412 2 1 1 60 X 10738687 10738707 CAATCTGTCGTATGTGTTGTC 57 10738647 10738667 ATAGAAGACCGGAATGATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg8a FBgn0052672 FBtr0071498 3 1 1 60 X 10659669 10659687 TGAACAACGTCATTCCACC 58 10659558 10659646 TCGTGATGTTCCTGGTACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0302373 3 1 3 206 X 10266113 10266133 AATCAGTGAGCTTTCATCCTG 58 10265670 10265688 TGGTGGTGAAGTCATCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ipod FBgn0030187 FBtr0071484 2 1 1 112 X 10126245 10126335 GAAATGAAGGTCTTCATCTGCC 59 10126154 10126172 GTGGTCTTGCTACCTCCTC 59 NA InUTR Drosophila melanogaster 61 CG15369 FBgn0030105 FBtr0071309 1 1 1 176 X 9110962 9110983 TTTCTCGCCAAGATTCTAATCC 58 9111120 9111191 TTTGGAGAGGCGATAGTGG 59 NA Drosophila melanogaster 61 CG7267 FBgn0030079 FBtr0071354 3 1 1 110 X 8965827 8965915 TCTGCTGATCGGTCATGTG 59 8965735 8965753 TCATCGATCACCAGTGCTC 59 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 2 3 3 85 X 8466541 8466560 TGAGGTTCGACCACTATGTG 59 8466324 8466493 GTTCAGTTCATTGCAGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 PIP82 FBgn0024943 FBtr0071235 3 1 1 91 X 8419944 8419962 AAATCCTGCAGCATCAACG 59 8419796 8419890 GTAGCTATTCTCTTCGTCGC 58 NA Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0300066 1 1 2 102 X 8365767 8366470 CGCTATCAAATCGACTATGCC 59 8366534 8366552 CATTGATGGCCTTTCCAGC 59 NA Drosophila melanogaster 61 CG1636 FBgn0030030 FBtr0071171 2 1 1 81 X 8167779 8168326 CTCTTCCAGTTCTTTCTGAAGTC 59 8168367 8168385 AGGCGATGTTCCAAATGAC 58 NA Drosophila melanogaster 61 CG17982 FBgn0030006 FBtr0071191 1 1 1 60 X 8036920 8036940 AAGATCCATCAACTACGACGA 59 8036880 8036898 GTAGTCGCTATTCGCTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1575 FBgn0029999 FBtr0071151 2 1 1 60 X 8011328 8011348 TTCAATCTCAAGGAGACACTG 57 8011370 8011388 CATCAGTGCGGAACTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071129 2 1 2 81 X 7839972 7839991 GAGGATCGATCTTCCAACAC 58 7837242 7839931 AAATTTGATCGGTAGACACCTC 58 NA Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071094 3 1 2 148 X 7827794 7828046 GGTTAACGCAAGTGTTGCT 59 7828158 7828176 AAGCTGGCGTAGATGTGAG 59 NA InUTR Drosophila melanogaster 61 unc-119 FBgn0025549 FBtr0071066 3 1 1 114 X 7183621 7183640 GCCTGCTAAAGACGTTTGAC 59 7183285 7183546 ATCATCTCAGCAACTAGGTCG 59 NA Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0300177 2 1 2 85 X 6745078 6745346 CTTTGTGCTCAGTTACAATTGG 58 6745391 6745410 CAATTAGGCTGATGGACAGC 59 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 3 3 3 269 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616470 6616489 GGGCAGATAGAAGAGAAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 1 2 2 139 X 6571897 6572033 ATGGCTGGCTGGAATAAGG 59 6571776 6571794 TAATCTCCGTAGCCCAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3226 FBgn0029882 FBtr0070993 3 1 1 140 X 6547753 6547948 GCCAAGAGATATCTGCACG 58 6547631 6547649 CTGCAACGAGTTAGGTGTG 58 NA Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 2 2 2 182 X 6484266 6484349 TATCATCTTGCAGCAGGTG 57 6484495 6484513 CAGTGGCTGAGAATGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17717 FBgn0029877 FBtr0070944,FBtr0070943 1 2 2 160 X 6484266 6484349 TATCATCTTGCAGCAGGTG 57 6484473 6484491 TGAGCATAAATCGTGTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 3 5 6 87 X 6456185 6456268 GGATAATGTCGAGGAGCCC 59 6456318 6456337 CATAATGACACTGGCTCCCA 59 NA Drosophila melanogaster 61 PpV FBgn0003139 FBtr0070921 1 1 1 81 X 6266590 6266696 ATCCATGGCCAGTTCTACG 59 6266527 6266547 CGCCCATGAATATGTAGTTGG 59 NA Drosophila melanogaster 61 Btd FBgn0029848 FBtr0070878 2 1 1 175 X 6113109 6113280 CAGTTCGCATCAGCTTTCC 59 6112952 6112970 GTATGTGCTCGGGAAACAC 58 NA Drosophila melanogaster 61 Mlc-c FBgn0004687 FBtr0070783 1 1 1 125 X 5514309 5516292 GTTGGCTGAATTCCAGGAG 58 5514202 5514220 TTCTTGACATCCGACTCGG 59 NA Drosophila melanogaster 61 Vsx1 FBgn0029775 FBtr0070781 1 1 1 96 X 5489114 5500126 CAGTTTGCAGAACAAGCTG 57 5500186 5500204 AACTGCTATTCTTGCTGGG 57 NA Drosophila melanogaster 61 Pp2C1 FBgn0022768 FBtr0070685 1 1 1 93 X 4579209 4579229 TTCTGGTCTGATCAGGATGAG 59 4577959 4579154 GCCATTTCTCTTGTTCCCG 59 NA Drosophila melanogaster 61 Xpac FBgn0004832 FBtr0070670 1 1 1 93 X 3998012 3998030 CAAGTTGGTTTCGCATCCA 59 3997872 3997890 GATCACAGAGCTTCCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15375 FBgn0029694 FBtr0070637 3 1 1 99 X 3995735 3995831 CTTCTTCATTTCGTCAAGGTC 57 3995890 3995910 TGTTTAGCTCCATGTAGTTCG 58 NA Drosophila melanogaster 61 CG32790 FBgn0052790 FBtr0070621 2 1 1 60 X 3972950 3972971 CAAACAGTACACGATTCTCCAG 59 3972992 3973010 CTGCATAACAGATGCAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 1 3 3 81 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 CG10260 FBgn0040335 FBtr0070443 3 1 1 88 X 2526235 2526253 CGTATTTGGCACGATTCCG 59 2526303 2526385 CTGGGAGTTCGGATTATTGGA 59 NA Drosophila melanogaster 61 mRpL14 FBgn0040389 FBtr0070405 1 1 1 60 X 2238285 2238303 TGAAGAAGGGCATTCTCGT 59 2238243 2238261 TCGAATTTCGGCTGTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ilp6 FBgn0044047 FBtr0070406 2 1 1 99 X 2226030 2226049 GAACAGAGACGCATGATGTG 59 2225872 2225970 AACTGTTGGGAAATACATCGC 59 NA Drosophila melanogaster 61 Cyp4d14 FBgn0023541 FBtr0070426 1 1 1 81 X 2069156 2069174 GATACGAGGACCCAAGAGC 59 2068940 2069117 CATATCAAAGATAGTCTTGGGTGAC 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302028,FBtr0302174,FBtr0302175 3 4 4 80 X 1643775 1643795 CGATAATTATGGACATGCTGC 57 1642312 1643735 AGTTACGTGATGACTCTATGG 57 NA Drosophila melanogaster 61 CG3699 FBgn0040349 FBtr0070186 3 1 1 62 X 840816 840834 CTCCAAGGCAAGTTTCACC 59 840772 840790 GTCAGATTGTGCTTGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070093 2 1 2 98 X 386658 386790 AAGGTGGACTAAATGGCCC 59 386578 386597 CTTCGACTCAACGAACTTGC 59 NA InUTR Drosophila melanogaster 61 CR41548 FBgn0085802 FBtr0114256 1 1 1 60 U 9796457 9796480 GGTTGAACTCTAGATAACATGCAG 59 9796497 9796517 ATTTGAAAGATCTGTCGTCGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40947 FBgn0085540 FBtr0302352 2 1 1 60 U 8131540 8131558 GGAGTACGGCATGATTCAC 58 8131498 8131516 ACGCATATAATTCACGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40992 FBgn0085550 FBtr0302343 1 1 1 60 U 5052226 5052245 AACGGAGTTTGTTACATCCC 58 5052185 5052206 TCGAGATAATGTCAAGCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2442a FBgn0082989 FBtr0113582 1 1 1 62 3R 1424478 1424499 GCTGCATATCATTAGAGCTGAC 59 1424437 1424456 TTGCATATTCTTGACACCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Est4aPsi FBgn0027934 FBtr0090038 2 1 1 114 3R 3353505 3353608 GATCATTTCGATGCTAACTGGG 59 3353683 3353701 ACTCTGGTCGGGATTTGTC 59 NA Drosophila melanogaster 61 RNaseP:RNA FBgn0046696 FBtr0085775 1 1 1 60 3R 27043362 27043381 CAGTTGCAAACTAGCATCTG 57 27043321 27043342 CAATGGTTTGTGGAGTAATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847 1 1 2 91 3R 27631321 27631342 CGACAATAATTCAGCATCAGAG 57 27631521 27631539 ATAAGCTGAGTTGACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 1 5 5 80 3R 27426314 27426404 TACATGAGGATTCCTGATCGC 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 2 3 3 80 3R 27398816 27398834 TCCAAGTTGGTCAACAAGC 58 27398876 27398993 CTTACAGGCAATGCGTATCAG 59 NA Drosophila melanogaster 61 Gcn2 FBgn0019990 FBtr0085787 1 1 1 80 3R 27224759 27224835 CGGTGAAGATGCTTCAGTG 58 27224879 27224897 CCAGGTCTGAGATGAGCAG 59 NA Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 3 2 2 83 3R 27166296 27177001 AGATCAAGGATGATTTGCCC 58 27177047 27177065 TGCCGAAGTATGAGGTCTC 58 NA Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750 3 1 2 286 3R 26789764 26789785 CTTTCATACTGGCGATTCAGAG 59 26789403 26789517 CATGATGGTGAGTGTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15546 FBgn0039807 FBtr0085718 2 1 1 60 3R 26701652 26701673 ACTTCCAATCAGAATGTATCCG 58 26701613 26701634 CAAACTCCTTGTGAAACATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tll FBgn0003720 FBtr0085709 3 1 1 60 3R 26678302 26678322 GATCAGAAATACAACAGCGTG 57 26678342 26678483 CATGGTATAGAATGCGACTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15544 FBgn0039804 FBtr0085708 2 1 1 80 3R 26665686 26665704 AACGTCAGCATTCATCACC 58 26665743 26666181 CACACTTGACTAGATCTCTATTGG 58 NA Drosophila melanogaster 61 CG31016 FBgn0051016 FBtr0300962 1 1 1 80 3R 26433632 26433652 TAGAAAGTCCTACGACTACGA 57 26433692 26433778 CGTGTCATTACCAACTTTGTG 58 NA Drosophila melanogaster 61 PH4alphaNE2 FBgn0039783 FBtr0085685 1 1 1 80 3R 26336165 26336185 CGAAGGGTAACGATCATATGG 58 26336046 26336123 TCCACTTGCTCATAACCCA 58 NA Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 1 1 1 80 3R 26247245 26247263 AATGAAGGAGACAGGAGGC 59 26247074 26247203 TCTTCCTCTGGTATTGGAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7950 FBgn0260468 FBtr0085564,FBtr0085563 2 2 2 60 3R 25883436 25883454 GATGCCTTCACCAAGATGC 59 25883476 25883496 CAGATTTGTTGTACACGGTGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15522 FBgn0039723 FBtr0085503 3 1 1 142 3R 25753836 25753915 GATAACAGGATACTTGCTCGG 58 25754018 25754037 TGGCCTTCTGATATGATTGC 58 NA Drosophila melanogaster 61 RpS8 FBgn0039713 FBtr0085489 1 1 1 90 3R 25688838 25688856 TGAAGAAGTACCTGGAGCG 59 25688910 25689146 GAAATGCAAGCCAAGATGC 58 NA Nonspecific Drosophila melanogaster 61 CG1907 FBgn0039674 FBtr0085447 2 1 1 158 3R 25445365 25445454 TAGACTTGGTCAAGACCCG 58 25445576 25445594 TGTAGGTTGCCTGTCTCAG 59 NA Drosophila melanogaster 61 CG11501 FBgn0039666 FBtr0085426 1 1 1 66 3R 25319821 25319839 GATCGTGCAACATCTTCGG 59 25319869 25319887 AATTCCTGTGACCAATCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085424,FBtr0085422,FBtr0110981 1 5 5 80 3R 25300557 25301994 CGGAGTCAAGGATTATACAACTG 59 25302031 25302052 GGTTGTAGTCATTATGCGACTG 59 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 2 3 3 110 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046234 25046252 CCGAACTTGAAGTTGTCGG 59 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 3 2 2 80 3R 24989871 24989952 ACGTTGATCCAGAAACCGA 59 24989994 24990014 GGGCTATAGTCAATACAGTGC 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 3 10 10 114 3R 24963140 24963158 GCATTGTATTGACCTGCGT 58 24963236 24963314 AACTCGACCCAATGGAGAC 59 NA Drosophila melanogaster 61 CG1647 FBgn0039602 FBtr0085326 1 1 1 80 3R 24646370 24646388 GGGAAATGTGCTATGCGAC 59 24646430 24646519 GATCAATTAATCTTGCGGGCT 59 NA Drosophila melanogaster 61 CG5402 FBgn0039521 FBtr0085213 2 1 1 157 3R 23328434 23328454 CGGTTAAAGTAGCTGTTGACG 59 23328045 23328064 CGATGGCAAACTAGACTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14246 FBgn0040608 FBtr0100441 2 1 1 90 3R 22553424 22555495 ATCAAAGGGAGAGCCATGTC 59 22555548 22555566 AGAAATGCCGGTAGCTCTG 59 NA InUTR Drosophila melanogaster 61 CG34291 FBgn0085320 FBtr0112487 2 1 1 83 3R 22251128 22251146 AAGGAGGGTAACAAGTGCA 58 22251063 22251081 CAGATTGACGCTTGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544,FBtr0085000 2 2 6 61 3R 22082663 22082681 CAGAACGAGCTGCTTAAGC 59 22082311 22082331 GCTGTATAGTTACCACAAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 2 3 3 86 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884602 21884620 CGTACTGGTACACCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14354 FBgn0039376 FBtr0084905 3 1 1 67 3R 21641703 21641778 GTTGGTTCACAGACAAATGTC 58 21641807 21641825 GATTGCAACAGCGTTTGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084884,FBtr0084885 1 2 2 60 3R 21444519 21444539 ATGTCTATTGAAGAAGCACCC 58 21444561 21444579 CCACGTTGATGTCTTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10513 FBgn0039311 FBtr0114505 1 1 1 94 3R 21101771 21101855 ATTCTTTGCTGTCACAGTCG 58 21101696 21101715 CGTCATCCTTCATCAAAGCA 58 NA Drosophila melanogaster 61 CG31111 FBgn0051111 FBtr0084790 1 1 1 93 3R 20881597 20881765 TATCTACTGGAGAACGCCG 58 20881522 20881545 GCTCTATCAAGTAAAGTCTTTGGG 59 NA Drosophila melanogaster 61 bai FBgn0045866 FBtr0084758 3 1 1 80 3R 20865334 20865426 CAGATCATCGACTACATTGCAC 59 20865467 20865485 GCTGAACTTGCCCTTAGTG 58 NA Drosophila melanogaster 61 RabX4 FBgn0051118 FBtr0084736 2 1 1 112 3R 20653339 20653571 CATCTCTACGATAGGCATTGAC 58 20653248 20653267 TGGTCAATGTTCGGAATCTC 58 NA Drosophila melanogaster 61 CG5807 FBgn0027539 FBtr0084739 2 1 1 80 3R 20632458 20632477 CAGCTAATGCTGAACTGTGG 59 20632331 20632418 GTTTGTGATGCCTATGATCCTG 59 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 3 2 3 104 3R 20476218 20476236 AAGGGTAAACTTCTGCCCT 58 20476304 20476382 CTGGGATATGGTAGCCTGG 59 NA Drosophila melanogaster 61 CG5762 FBgn0039190 FBtr0084627 1 1 1 80 3R 20186908 20186926 ACGAAATCGTAGACGGGAC 59 20186788 20186864 CTCGGTCTTTCTTCCTGGG 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 2 4 4 101 3R 20173011 20173134 CAACAAAGCCATCACAGCT 59 20172928 20172946 ATTGTATCCCTGCTGGGTG 59 NA Drosophila melanogaster 61 CG17786 FBgn0039167 FBtr0084572 3 1 1 60 3R 20043101 20043119 GAATTCGCTCCCATTACCG 58 20043059 20043077 GGGATCCGATTACTCCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spas FBgn0039141 FBtr0084533,FBtr0084534 3 2 2 144 3R 19864976 19865327 AGAACGAAGGTCACAAAGAG 57 19865434 19865452 TTTGTCTGCATCTTGTCGT 57 NA Drosophila melanogaster 61 CG13603 FBgn0039135 FBtr0084510 2 1 1 85 3R 19811394 19811591 TGGGAACCACTCAGTTTGG 59 19811327 19811348 GTTGTCGATCAGTTTCAGAAGG 59 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 3 2 2 108 3R 19760640 19760755 ATAAGCGCTATTTGATGCCG 59 19760825 19760844 ACGTGCACAGTATTCAAACG 59 NA Drosophila melanogaster 61 CG10208 FBgn0039118 FBtr0084461 3 1 1 111 3R 19599534 19599624 CGAAGGAGGAGTATGATAATAAACG 59 19599447 19599467 AAATCACCCTCTTGCATTGTC 59 NA Drosophila melanogaster 61 CG10208 FBgn0039118 FBtr0084461 2 1 1 110 3R 19599534 19599624 CGAAGGAGGAGTATGATAATAAACG 59 19599448 19599467 AATCACCCTCTTGCATTGTC 58 NA Drosophila melanogaster 61 CG10214 FBgn0039115 FBtr0084463 2 1 1 60 3R 19592776 19592796 GATGTGAATCTCGAAGAAGCC 59 19592736 19592759 TTGGTATGTTCTTCTCGAGATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 3 1 1 164 3R 19237992 19238010 GTGGTACGAGAACCAACAG 58 19237715 19237733 TGTTGTCCTTGTCCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17109 FBgn0039051 FBtr0084351 1 1 1 96 3R 18921534 18921613 ATGTGGATTACACCGAATGTG 58 18921671 18921689 ACAGGCTTCTTCTCCACTG 59 NA Drosophila melanogaster 61 mats FBgn0038965 FBtr0084229 2 1 1 114 3R 18247753 18247771 TGATCTCATGAAGCATGCG 58 18247849 18247928 AAAGTCCACGGTGTTAACG 58 NA Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 2 2 2 85 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198002 18198020 TTCTTCTTTCCGACCTGCA 59 NA Drosophila melanogaster 61 CG13858 FBgn0040585 FBtr0084243 1 1 1 69 3R 18144558 18144576 CTAGTGGAGCTAGTGGTGC 59 18144507 18144525 AAGGAGACCTTGTTCAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 2 2 2 135 3R 17844428 17844509 GGGCTACGGATAACTACGG 59 17843784 17843803 AAGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 CG31353 FBgn0051353 FBtr0084191 2 1 1 69 3R 17804573 17804591 TAGGCTAGAGAACTGTGGC 58 17804522 17804542 GTACCTGCAGCTAAAGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 RpI12 FBgn0038903 FBtr0084166 1 1 1 134 3R 17603311 17603380 CAGCCAGATGTTTACAGCG 59 17603195 17603213 ACACTTCCTCTCCACAACG 59 NA Drosophila melanogaster 61 CG6800 FBgn0038902 FBtr0084132 2 1 1 186 3R 17602472 17602490 GAACCGGAGTGGATATGTG 57 17602702 17602772 TTGGGAAACCGTATCTTGC 58 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 2 2 2 81 3R 17231538 17231557 CTGTCTTCATCTGGGATCCA 58 17231598 17231708 AACCAAATCCTTGAAGACAGAG 58 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 1 2 2 80 3R 16955074 16955159 TTTGCATGCATGTATTGCG 58 16955012 16955032 AATGCCTGGGTATTAACAGTG 58 NA Drosophila melanogaster 61 TotA FBgn0028396 FBtr0083971 1 1 1 82 3R 16696813 16696918 TGCTCTTATGTGCTTTGCAC 59 16696963 16696981 TAAGGTTGTCAGCCTCACG 59 NA Drosophila melanogaster 61 CG31199 FBgn0051199 FBtr0083930 3 1 1 99 3R 16569367 16569388 GAAGATCAGATGCTCAATATGC 57 16569232 16569307 GAATCTTGCCCTCAAACCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4335 FBgn0038795 FBtr0083894 1 1 1 80 3R 16233397 16233421 TAGATCTACCAGCTGATATAATGCC 59 16233282 16233359 TGTGAGCATCACTCCACTG 59 NA Drosophila melanogaster 61 CG4362 FBgn0038784 FBtr0083900 2 1 1 82 3R 16132292 16132310 GTCTTACCTGCTCTCACTG 57 16132161 16132179 TCCGTTTCCGGAATTATCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4468 FBgn0038749 FBtr0083852 1 1 1 80 3R 15740854 15740872 CAGAAGGTGGACGAGAAGG 59 15740724 15740811 CATTTCAAATGCCTCCGGAG 59 NA Nonspecific Drosophila melanogaster 61 CG7342 FBgn0038716 FBtr0083777 3 1 1 82 3R 15430939 15430960 CCCATCTACTTGATCTGTTCCA 59 15431003 15431086 GAGGGTGATGACCATGGAC 59 NA Drosophila melanogaster 61 mRpL55 FBgn0038678 FBtr0083754 3 1 1 95 3R 14920298 14920374 AGATTATCAAGCTTCCCTTGG 57 14920223 14920241 TGATCTTGACCTTCTTGCG 57 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 2 5 5 104 3R 14751506 14751633 GAATGATGATCGGTTCGAGG 58 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083665 1 1 2 199 3R 14495409 14496833 GACTAACGACTATCCACGG 57 14496996 14497014 AGGCGTACTGAATTTCGAG 57 NA InUTR Drosophila melanogaster 61 CG14301 FBgn0038632 FBtr0290199 2 1 1 259 3R 14466611 14466631 AGTGCAAGTGTTAAGAGAACG 59 14456620 14466391 AACTGTTTCATGGCAATCAG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7998 FBgn0038587 FBtr0083563 3 1 1 148 3R 14053487 14053505 ATCTGTTCAACGTGAACGC 59 14053615 14053693 GTAAACACCAGCCTTCTTGAG 59 NA Drosophila melanogaster 61 CG31249 FBgn0051249 FBtr0083483 3 1 1 90 3R 13512651 13512670 GAAACTCGAGGTACTGGGTC 59 13512522 13512540 CTCCAACCAGAGGACTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 2 2 2 83 3R 13361549 13361568 TTGGCTAAGGGTTTCCTAGC 59 13361795 13361813 CAGGGAGAGCTTATCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5866 FBgn0038508 FBtr0083440 2 1 1 60 3R 13241764 13241782 GTCTGAATCGCATGATCCT 57 13241804 13241824 AGGATGTGAACCATGATAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cal1 FBgn0038478 FBtr0083400 2 1 1 71 3R 12914166 12914184 GTCTACGAGCGCTCTAAGG 59 12914275 12914294 TATTTCCATGCCGTCTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083350,FBtr0083347,FBtr0083349 2 4 6 123 3R 12484785 12536292 ACTGGCTAGGTACAAATGGT 58 12484681 12484699 ATCTCGATTCTCCGTCTGC 59 NA Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083312,FBtr0083313 3 2 2 164 3R 12276730 12276749 TGTACAACCGTAGAAATGGC 58 12272753 12272771 CATCGATGAACTGCTCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5623 FBgn0038357 FBtr0083197 2 1 1 99 3R 11593041 11593059 ATCTGCGTTGCAATAAGCG 59 11592894 11592912 TCTCCCTCCTTACAAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31315 FBgn0051315 FBtr0083168 1 1 1 60 3R 11580840 11580861 CATTACAACTTCGTCTCGAGAG 59 11580880 11580900 AACTTTGTAGCTGGCTTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162,FBtr0083161 2 2 2 264 3R 11492268 11492289 ACTTGACAAATATCCGTTGGAC 59 11497691 11497710 CAGTTCCATCATATCCAGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6623 FBgn0038303 FBtr0083138 1 1 1 80 3R 11044247 11044265 AGTACAAGCAGGGTGACTG 59 11044128 11044203 AGGTGTCCACATCATTGCA 59 NA Drosophila melanogaster 61 RpS5b FBgn0038277 FBtr0083006 3 1 1 95 3R 10726408 10726684 TGTCAACCAGGCAATTTGG 59 10726331 10726349 ATCAGCTCATCAGCCAGAC 59 NA Nonspecific Drosophila melanogaster 61 CG3610 FBgn0038266 FBtr0082994 2 1 1 60 3R 10671022 10671041 GTACCGAATCTTCTGACCGA 59 10671064 10671082 CAGAAACACAGTCGTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3509 FBgn0038252 FBtr0082969 3 1 1 74 3R 10489973 10489992 AAATCCAGTAAACCAACCGA 57 10490123 10490141 ATCCTTGGTTCCATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31321 FBgn0051321 FBtr0082926 2 1 1 81 3R 10138813 10138895 AATAACGGCAGAATGTTGCT 58 10138939 10138957 AATAGTCGTTCTCACCGGA 58 NA Drosophila melanogaster 61 CG14356 FBgn0038207 FBtr0082908 3 1 1 190 3R 9957730 9957749 TTAACGTCTGTGATACTCCG 57 9956906 9956924 CAGTAGGAAGCCGATTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mst87F FBgn0002862 FBtr0082884 1 1 1 198 3R 9653356 9653374 TATTTGTCCTTTCGGCCTG 57 9653086 9653104 ACATTCGGTCCATAGCAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082786,FBtr0082785 1 2 2 60 3R 9252550 9252568 CATCATCACCAACTGGGAC 58 9252589 9252610 CAGCTCGTTATAGAAAGTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14377 FBgn0038148 FBtr0082756 2 1 1 125 3R 9223600 9223618 CATCTGTTTGACCCTGTGC 59 9223707 9223725 GAGTAGGTGGTAACCGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 1 2 2 84 3R 8668033 8668331 GAATGCAAACTCTGGCTCG 59 8667967 8667985 TAGTAGAATTGCCGCCAGG 59 NA Drosophila melanogaster 61 CG11598 FBgn0038067 FBtr0110781 2 1 1 82 3R 8460685 8460761 CCAAGGGACTAATTACATCCGA 59 8460804 8460822 ATACCCATCTCGTGTGAGC 59 NA Drosophila melanogaster 61 desat2 FBgn0043043 FBtr0082592 3 1 1 81 3R 8263088 8263178 ATACGACAAGACCATGAATCCT 59 8263220 8263238 GTGATGGTAGTTGTGCCAC 58 NA Drosophila melanogaster 61 CG5245 FBgn0038047 FBtr0082589 3 1 1 61 3R 8255333 8255404 TCAACTATGGATCTGGCGA 58 8255429 8255447 TCTTCTTGAGGTGGTTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5641 FBgn0038046 FBtr0082594 1 1 1 80 3R 8254620 8254639 GGCAATCTAGTGACCAAGGT 59 8254498 8254579 CTCCAGTTGACAAGTTGTCAG 59 NA Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 1 1 1 73 3R 8252668 8252792 AGAGATCGTTGGAGTTCCT 57 8252829 8252847 AAAGTTGTTTGCGTCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 3 1 1 60 3R 7706801 7706880 AAACACCTAGTCTTTCCTACAGG 59 7706763 7706784 TCGATAATAAAGCCATCGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14710 FBgn0037920 FBtr0299566 3 1 1 88 3R 7446055 7446131 TGTAGGATTAGGGTTCGCC 58 7446181 7446201 CGAAAGTTGAACCACATTTGG 58 NA Drosophila melanogaster 61 jumu FBgn0015396 FBtr0082237 3 1 1 80 3R 6185605 6185685 CGACTTCGATATAGAGGTCGG 59 6185725 6185745 GAGATAATTCGACGCACTGAC 59 NA Drosophila melanogaster 61 CG6293 FBgn0037807 FBtr0082240 2 1 1 118 3R 6135706 6135727 AAGTACGTAACTCCATTGACCA 59 6135409 6135627 ATTCCAGTGGTTCCCACAG 59 NA Drosophila melanogaster 61 Sirt6 FBgn0037802 FBtr0082242 2 1 1 60 3R 6087025 6087045 CAGTGTAAGAAATGCAGACGG 59 6086985 6087003 TTTGACCCACTGTTTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31407 FBgn0051407 FBtr0082214 3 1 1 60 3R 5848935 5848953 ATGGCCATTATTCGGTGGT 59 5848893 5848912 TACTGGTCTATATCCCGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12419 FBgn0037769 FBtr0082148 3 1 1 66 3R 5807736 5807754 CAGAACCACCATCATGCAC 59 5807784 5807802 GTAGCCCTCGTAGTCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082076 2 1 2 114 3R 5448767 5448840 CATGCTCCTCTTCTTGCAG 58 5448918 5448936 TCGGATTATCGTAGACGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9362 FBgn0037696 FBtr0082044 3 1 1 81 3R 5281431 5281514 CAATGCCAGGAGATACAAAGC 59 5281370 5281393 GACATCAAGTTCTTGTAGTTCCTG 59 NA Drosophila melanogaster 61 CG9740 FBgn0037669 FBtr0081984 3 1 1 125 3R 5083900 5083991 CTGATTATCCATAGGAAGTCATGTC 59 5083799 5083817 GAAGTCAATTGTGGAGCCG 59 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0113206,FBtr0301787,FBtr0081957 2 4 4 83 3R 4767487 4767505 TTGCCGAGGGTATCATCTC 59 4767552 4767638 CCTTGACTTTGGTTCCCTG 58 NA Drosophila melanogaster 61 CG11762 FBgn0037618 FBtr0081912 2 1 1 80 3R 4551259 4551279 CCTGAATCTCTTCGATTTGGT 58 4551318 4551387 TCCAAATCCACCAATCTTAGTC 58 NA Drosophila melanogaster 61 CG11753 FBgn0037603 FBtr0081879 1 1 1 80 3R 4479129 4479149 TTAAATGCGTTCTTAGCCTCC 58 4479190 4479277 GAAGGTGCAACTAAAGTCCA 58 NA Drosophila melanogaster 61 Or85d FBgn0037594 FBtr0081872 3 1 1 88 3R 4379497 4379516 TATTAAGAGGGCCCAACAGC 59 4379566 4379646 AGAGTTGCAAGAGATCCGAC 59 NA Drosophila melanogaster 61 CG2641 FBgn0037518 FBtr0081745 3 1 1 81 3R 3619974 3619993 TTTACTACAGTGGTGAGACG 57 3620034 3620604 AGAATGTATACCTCGTTCACAG 57 NA Drosophila melanogaster 61 nxf4 FBgn0051501 FBtr0081583 2 1 1 60 3R 3172676 3172694 ATGGATGGTATCGGGTCCT 59 3172715 3172736 AGCACTCGATTGAATGTTAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1227 FBgn0037491 FBtr0081598 3 1 1 80 3R 3074115 3074190 ATTTACACAGAGGACATGCAC 58 3074055 3074074 AACACTAAACACGAATGGCC 59 NA Drosophila melanogaster 61 CG42537 FBgn0260645 FBtr0301001 2 1 1 110 3R 2203556 2203574 GGTTCTAGCTTGCGTTGTG 59 2203708 2203727 CCAAATCCTTCGTTCTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Osi8 FBgn0037415 FBtr0078598 1 1 1 80 3R 2081403 2081424 AGGTCCTAAACAACATGATCCT 59 2081462 2081776 CCTCGTTATCGAATTTCACCTG 59 NA Drosophila melanogaster 61 CG15580 FBgn0037398 FBtr0078621,FBtr0273439 3 2 2 80 3R 1881012 1881141 AAGAATACCCGAATCCTATACG 57 1880953 1880972 CACTATCATGTCCACTTCGA 57 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 2 4 4 134 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644079 1644097 ATATCTTGCGTTTGGTGGT 57 NA Drosophila melanogaster 61 asl FBgn0261004 FBtr0078743 1 1 1 80 3R 1430086 1430171 ATTACCAAGGCGGAAATTCAG 59 1430026 1430047 GTGTTCCAATTCTTTCAGTTCC 58 NA Drosophila melanogaster 61 Nmdar1 FBgn0010399 FBtr0078763 2 1 1 80 3R 1341985 1342003 CTCGACGTACAACATTGGC 59 1341852 1341944 AAGTTGAGGTGCTTTATTGTGG 59 NA Drosophila melanogaster 61 CG1124 FBgn0037290 FBtr0078841 1 1 1 93 3R 792876 792894 GAACGACCCGAAATTGGTG 59 792950 793351 AGAGGGCAGCTGAATATCAG 59 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 2 2 2 89 3R 225228 225246 CAACTTCCTGTGGGTTCCA 59 225097 225176 ATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 3 2 2 91 3R 163947 163967 GGTGAATTCAACTTCGGACTC 59 164017 164778 ACAAAGGTATACACATCAACCG 58 NA Drosophila melanogaster 61 nvd FBgn0259697 FBtr0113473 3 1 1 80 3L 24394281 24394362 GAGAAAGTCTCATGTTCGAACG 59 24394398 24394421 CTTCCTTAGCTAAGATTGGATTCC 59 NA Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0078518 2 1 2 135 3L 22680806 22680825 TAAACACCACGCTGAATGTC 58 22680923 22681048 ATGAAGTAGGAGCCCTTGG 58 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 1 2 2 84 3L 22672449 22672533 GACAGTCAGGTATTTAAGAAGGAC 59 22672576 22672594 AAAGACTGTAGTCCGCCTG 59 NA Drosophila melanogaster 61 CG14565 FBgn0037129 FBtr0078452 3 1 1 68 3L 21737098 21737117 CTTTACATGAGGATAGCGCC 58 21737049 21737067 TGGGTGTTGTACTCAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14570 FBgn0037122 FBtr0078457 3 1 1 60 3L 21723316 21723335 CGGTTGAATTTCCTCAACCG 59 21723275 21723293 GGTGGTCCGTATGTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14570 FBgn0037122 FBtr0078457 2 1 1 60 3L 21723443 21723464 GAATTGAAGGCAGTCATCTGAG 59 21723404 21723423 TGTCTTTGCAGAAACCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chb FBgn0021760 FBtr0089460 1 1 3 88 3L 21166132 21171201 CTCTGTTGACGAGATTGCC 58 21171253 21171271 GATAAAGCCATCCAGGTCG 58 NA InUTR Drosophila melanogaster 61 CG3680 FBgn0037027 FBtr0078256 1 1 1 80 3L 20805705 20805723 AAGGCCAGAAATGTCAACG 58 20805765 20805840 TAGTGTACGATACATCTCCGC 59 NA Drosophila melanogaster 61 CG4825 FBgn0037010 FBtr0078214 2 1 1 90 3L 20516793 20516811 ACATCTTTGAGATGCCACC 57 20516654 20516741 TAATATTGCCTAACCGAAGGC 58 NA Drosophila melanogaster 61 CG6020 FBgn0037001 FBtr0078201 3 1 1 117 3L 20489519 20489537 AGAGAAGACCGTCAAGCAG 59 20489617 20489704 ATAGCGTTTAGGTCCCACAG 59 NA Drosophila melanogaster 61 CG6434 FBgn0036972 FBtr0074844 1 1 1 65 3L 20316253 20316271 GTTCTCGTAGAGGTAGGCG 59 20316144 20316224 GATGTTCAAGTCGCCATCG 59 NA DesignRelaxed Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 3 2 2 97 3L 20305626 20305644 ATCAAATCTCGCGTATGCC 58 20305704 20305790 TGAGAAGTTTAGCTGCACAG 58 NA Drosophila melanogaster 61 CG7017 FBgn0036951 FBtr0074856 3 1 1 82 3L 20204842 20205131 GAATAGAGCTAGCGGTGTC 57 20204778 20204798 CCGATAGGTATTCAAAGTCCT 57 NA Drosophila melanogaster 61 Csas FBgn0052220 FBtr0074911 3 1 1 107 3L 19981433 19981510 CCGCTAAGAGATCACATTATCTG 59 19981348 19981367 TATCACCCTGCCAATCTTGG 59 NA Drosophila melanogaster 61 CG17732 FBgn0036923 FBtr0074898 2 1 1 82 3L 19974801 19974823 CAGAATCCAAGTTTCTGTCTGAG 59 19974865 19975227 CTTCTTGGTTTCAGCACCG 59 NA Drosophila melanogaster 61 CG8334 FBgn0036913 FBtr0074890 3 1 1 80 3L 19869922 19869942 GATTCGATCCGTTTAGTCTGC 59 19869981 19870075 CCAACAGAATAACCAAGACCTC 59 NA Drosophila melanogaster 61 CG14104 FBgn0040786 FBtr0299563 2 1 1 61 3L 19800181 19800200 ATGAAACGTCAGAGGGTCAG 59 19800139 19800157 TAGGTCGTTGTACTCGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9372 FBgn0036891 FBtr0074945 2 1 1 88 3L 19600846 19600864 ATTGGTCGGATAGAAACGC 58 19600916 19601111 CAGGTTAACCTCCATGAGG 57 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 3 2 2 117 3L 19598219 19598237 CTAGACATGATCCGCAGTG 57 19598065 19598141 TTGTGTAGCACATAAGATCCTG 58 NA Drosophila melanogaster 61 CG33647 FBgn0053647 FBtr0091624 3 1 1 60 3L 19229484 19229502 TTGGTTGACCTGATTCTGG 57 19229525 19229603 AAACTTCTTTCTCTGCACGA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 1 2 2 83 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913036 18913114 GATCTTGCGCTTATCCATGG 59 NA Drosophila melanogaster 61 CG6839 FBgn0036831 FBtr0075069 2 1 1 78 3L 18910783 18910801 GAGGATGACGGGATCTTCG 59 18910843 18911215 TAGTAACACTGCAGGCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 3 2 2 80 3L 18865308 18865331 CTCAGATTTCTACTGCAAGATCTC 59 18865197 18865270 AGTTCACAGTACTCCACCTC 58 NA Drosophila melanogaster 61 CG7460 FBgn0036749 FBtr0075187 3 1 1 60 3L 17734159 17734180 GTAGTATACGACAAGGTCAAGG 58 17734201 17734219 TTTCATAGTGCGGTTCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB74a FBgn0261294 FBtr0091928 1 1 1 146 3L 17712630 17712650 CGGTACTAAATATGGTGTGCA 58 17712451 17712523 CCACGAAGTAAACAGTTCCT 57 NA Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 2 2 2 98 3L 17393991 17394009 ATCGTGTTATCAGGACGAC 57 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG13727 FBgn0036711 FBtr0075243 1 1 1 85 3L 17334033 17334053 GGTGGGAATATACACGATCGA 59 17333839 17333857 GGTTGACTGTCATAGGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 2 2 2 98 3L 16567987 16568005 AGAAAGCACCGAAATCGTC 58 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 CG34249 FBgn0085278 FBtr0112443 2 1 1 84 3L 16354861 16354879 GACCATCAAGGCCAAAGAC 58 16354795 16354813 CTGAGATGCCACAATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5414 FBgn0036569 FBtr0302328 2 1 1 80 3L 16093506 16093525 GACCAAGTTTCCCAATCGTC 59 16093565 16093644 GAAACTGCAATCTTGTTCTCCA 59 NA Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 1 2 2 88 3L 15529543 15540982 CGACTTAGATCCGGAATCCT 58 15541033 15541051 TGACGGTGGGATCTTTGAC 59 NA Drosophila melanogaster 61 ind FBgn0025776 FBtr0075668 2 1 1 60 3L 15036335 15036354 CACTGAAGAACCACTCTTCG 58 15036294 15036313 GCATAATCGTTGATCAGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta2 FBgn0023174 FBtr0075629 2 1 1 133 3L 14993472 14993756 AACATATACTGCTGTGGAGC 57 14993852 14993870 TTCAACATCGTATTGGCGG 58 NA Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075723 1 1 2 190 3L 14540569 14543644 AATTAACGCTACAATGACGAGC 59 14540400 14540418 ATTCGCTCCAGGTAACTCC 59 NA InUTR Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041,FBtr0100044,FBtr0100042,FBtr0100039,FBtr0100043,FBtr0100040 3 6 6 121 3L 14223401 14223764 GTACCGAGAGTCGGAACTG 59 14223848 14223867 TCTTCATCTGGCAGTTCTCG 59 NA Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749 3 1 2 82 3L 14090899 14090977 AGGGTATTGACCGCATGTC 59 14090835 14090856 TAGAGGCTGACGAATATTCTGG 59 NA Drosophila melanogaster 61 Meics FBgn0025874 FBtr0075791 1 1 1 74 3L 13957233 13957251 AGGAGAGTGAACCATTGCA 59 13957072 13957093 GAATGGATACTTCATCTTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17300 FBgn0036345 FBtr0075892 3 1 1 80 3L 13080164 13080262 TCTCGAGATTAGCCTTACGTC 59 13080104 13080122 GCCTACTTAGTCCTTGGGC 59 NA Drosophila melanogaster 61 CG10752 FBgn0036325 FBtr0075903 1 1 1 77 3L 12946980 12946998 AGATCGAGACACTTGGCTG 59 12946733 12946757 CTCATAGTTTGATATTAGCCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12520 FBgn0036324 FBtr0113169 3 1 1 109 3L 12895124 12895226 TTCGTGCTAGAGACGACAG 59 12895033 12895051 GCAACATTTCACCAGAGCT 58 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089321 3 1 3 80 3L 12492581 12494276 GGAACCTACAATTCGAAGGA 57 12492520 12492541 CGTATCTATATGACGATAGCCC 57 NA Drosophila melanogaster 61 CG34420 FBgn0085449 FBtr0112716 3 1 1 93 3L 11847414 11847432 ACCACAAATCACTGTGGTC 58 11845695 11847357 TATGCTGACCACACTTGGA 58 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0110780 2 1 3 88 3L 11814811 11814946 CGTTGAAAGCAATTTGTCAGTG 59 11814744 11814764 CCAACAAATTTGGGAGAATGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7551 FBgn0036161 FBtr0076176 1 1 1 60 3L 11451930 11451949 GGCATCATTATCGACAACTG 57 11451972 11451990 GTATCACGGATGAGAAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7560 FBgn0036157 FBtr0076173 1 1 1 80 3L 11418943 11419031 CTAAAGGCAAAGATTGATGCTG 58 11419070 11419090 CACAAATTGCACTATGACCTC 57 NA Drosophila melanogaster 61 nol FBgn0014368 FBtr0076214 1 1 1 86 3L 11123987 11124005 TATTCTCTTCGCCATCGTG 57 11124055 11124073 GGAGTAGTCGGATCAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14145 FBgn0036118 FBtr0076202 1 1 1 60 3L 11055014 11055035 CGAGAATCTGAATACTTCGACC 58 11055056 11055074 CATCGGAGCTAATTGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 2 2 2 61 3L 10626378 10626396 AACGTATCCAGATCCTCCA 57 10626418 10626496 GGACACGAAGATTGTATTAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG6674 FBgn0036063 FBtr0076354 1 1 1 143 3L 9964692 9964771 ATTACCAGGTAAACCCGCA 59 9964567 9964585 GAGATTCGTTATCGACGCC 58 NA Drosophila melanogaster 61 CG6761 FBgn0036031 FBtr0076414 1 1 1 80 3L 9694540 9694559 CTAACGCCACAAAGATGTCG 59 9694426 9694497 ACGATGGTTGGTCACTCTC 59 NA Drosophila melanogaster 61 CG3448 FBgn0035996 FBtr0076476 2 1 1 60 3L 9444053 9444071 CCACATCCGGGATTTAGAG 57 9444011 9444031 CTTTGCTCTTGATACTTTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Doc3 FBgn0035954 FBtr0076521 1 1 1 89 3L 8999389 8999478 CTTATCAGAATGACCGCATAACC 59 8999527 8999545 GTTTGCATCTCGACTGACC 58 NA Drosophila melanogaster 61 ZC3H3 FBgn0035900 FBtr0076656 1 1 1 96 3L 8501328 8501443 ATCTGTGTCAGCTTTCTGC 58 8501250 8501268 AATAGTACCGACAGACGGG 58 NA Drosophila melanogaster 61 CG7979 FBgn0035848 FBtr0076690 2 1 1 92 3L 8174949 8174969 CATGTAAACCCTATTGGACCG 58 8175023 8175328 CACTTTCTCCTGTTTGGCA 58 NA Drosophila melanogaster 61 msk FBgn0026252 FBtr0076685 2 1 1 80 3L 8111721 8111740 TCATGTCGTTTACTGACTCC 57 8111780 8111853 CAAAGATATCGAACTTAAGGCG 57 NA Drosophila melanogaster 61 CG8111 FBgn0035825 FBtr0076770 1 1 1 87 3L 7907091 7907170 TTCGTCTGCTGTTTGTACG 58 7907022 7907040 AATGCGATGAGTAGGTTGC 58 NA Drosophila melanogaster 61 CG32365 FBgn0052365 FBtr0076746 3 1 1 167 3L 7863000 7863018 CACCGCCAACATGATACAC 59 7863149 7883152 AAGATGTTGGCATCCTGCT 59 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302546 3 1 5 216 3L 7361073 7361170 TGTTAAAGGTGAAGAAGCGC 59 7360876 7360895 TAATCACCGCAGTACTCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 3 1 1 98 3L 7233083 7233159 AAACAAAGTGACCTGCCTC 58 7233219 7233239 TTAATAATCGGCTGATCGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 3 2 2 81 3L 7137995 7138070 GTTGATAAGAACAAACTGCAGC 58 7137935 7137953 GCAGCTTCAGGTTAACGTC 59 NA Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 2 2 2 80 3L 7137995 7138070 GTTGATAAGAACAAACTGCAGC 58 7137936 7137954 CAGCTTCAGGTTAACGTCC 58 NA Drosophila melanogaster 61 Cpr65Eb FBgn0035736 FBtr0076928 3 1 1 148 3L 7081719 7081808 TGTCGAAGATCAACGTCGT 59 7081589 7081610 GAACTGGTAATTGTAGATGCCA 58 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 3 2 2 83 3L 6711101 6712112 GTATTGAGAATGGCTATCCATCC 58 6711040 6711058 GTTTGGTCTGCTTGACCAC 59 NA Drosophila melanogaster 61 Best2 FBgn0035696 FBtr0077010 2 1 1 81 3L 6244727 6244749 GGATATTCGTAGACGTTTAGGTG 58 6244588 6244686 CAGGGTGACTACCTGAGTG 59 NA Drosophila melanogaster 61 CG5537 FBgn0035639 FBtr0077112 1 1 1 144 3L 5804408 5804491 TATTGCGCGACAAGAACAC 59 5804599 5804617 AGTCCCTCGTAAATCGCAC 59 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 2 2 2 106 3L 5798502 5798579 TGAGATCCTATGGTCGGTC 58 5798649 5798667 GAAATTCAAACCGATCCGC 57 NA Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077124,FBtr0077123 3 2 2 60 3L 5744200 5744218 TCGAGCATGATCTGTTCGT 59 5744158 5744178 TTCATCTTCTTGATGCATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10592 FBgn0035619 FBtr0077129 1 1 1 83 3L 5586294 5586381 ATCAACGGCTATCCGTACC 59 5586229 5586249 CAAGATGGTAAAGGGAAGCTC 58 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 3 2 3 190 3L 5566920 5568049 TAATCATCAGGCCTACAAGC 57 5566749 5566768 AAGTCTCAAGCATTAGCTCC 57 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 2 2 3 189 3L 5566920 5568048 AATCATCAGGCCTACAAGC 57 5566749 5566768 AAGTCTCAAGCATTAGCTCC 57 NA Drosophila melanogaster 61 bc10 FBgn0040239 FBtr0077084 1 1 1 191 3L 5558417 5558435 GAGCATCTAAACGACCCGA 59 5558745 5558763 TATCAGTAGTACGGGCAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 1 2 2 80 3L 5498119 5498138 TTCTTGCACAATATCCCAGC 58 5497206 5498077 GTATGCCTTCGCATAGATGC 59 NA Drosophila melanogaster 61 CG15876 FBgn0035569 FBtr0073365 3 1 1 65 3L 4694370 4694388 AAACCTCGATCCTCCACAG 59 4694323 4694342 TTAAACGAAGATCTCCGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1299 FBgn0035501 FBtr0073215 1 1 1 80 3L 4151548 4151630 CAGGATCTGCAATTTGTACGT 59 4151669 4151690 TGCTATGTTAATGTCCACATGG 58 NA Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073209,FBtr0073210 1 2 2 60 3L 4106040 4106060 TACCAGACTTCGGTGTTACTC 59 4106082 4106100 AGCTCCTCCTTCTTGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr64f FBgn0052255 FBtr0073201 1 1 1 82 3L 4036806 4036824 ATTGTGAGCATTGGACTGG 58 4036868 4036938 GATGGAGCCATATTCATTCCT 57 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073070,FBtr0073072,FBtr0073071 3 4 4 80 3L 3365741 3365818 AGTCCATGAAGCAACAGTC 57 3365860 3365880 AGTTACGAGAACTAACTGGTG 57 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG16753 FBgn0035393 FBtr0072990 2 1 1 60 3L 3055353 3055371 GCGTAAGAAACGCAAGGAG 60 3055393 3055413 TAGATCTCCGACAACTTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729,FBtr0302728 2 2 3 122 3L 1804304 1804322 AATACCTCCCAACAGTCGC 59 1804469 1804487 CATGCATGGATTGTCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 2 2 2 80 3L 1557836 1557854 AGAAGCAGCCTCAATCCTC 59 1557700 1557795 TGTTGGTATGTAACTCACTGGA 59 NA Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072726 2 1 2 176 3L 1322441 1322549 AGACCATTGAGGATCAGCA 58 1322283 1322306 CATTGTAGTAGGGATTGTAGTAGG 58 NA Drosophila melanogaster 61 CG9153 FBgn0035207 FBtr0072671,FBtr0072670 3 2 2 82 3L 1317543 1317561 ATGAGGATTACGACTGGCA 58 1317604 1317680 CCATTTGATTGTATCATCGACC 57 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835 2 1 2 80 3L 897524 897616 GTATACAATGATCCTGGCTACCT 60 897651 897674 ATACTTAAGTAGAGCAGCCTTCTC 60 NA Drosophila melanogaster 61 CG3344 FBgn0035154 FBtr0072609 2 1 1 86 3L 686635 686655 ACTTCTATAACGTGGAGACCC 59 686516 686587 GATACATGACCTCCTCCGG 59 NA Drosophila melanogaster 61 CG3402 FBgn0035148 FBtr0072559 2 1 1 82 3L 652265 652452 ACGGATTATGGCATCTATGTG 58 652203 652221 AGGATCTTGTCGTGGATCC 58 NA Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 2 2 2 157 3L 360878 360897 GATCCCAGCATCAAGAAGAC 58 360681 360759 GCTTGGTCTAGCAAGTACTC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1175a FBgn0083005 FBtr0113527 1 1 1 87 2R 18494606 18494625 TTGTTGGAATTGTTGTCCCT 58 18494673 18494693 TCTATAGCGTAGCTTGGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A3407a FBgn0063385 FBtr0086844 1 1 1 60 2R 13587214 13587234 GATGAAACATTTACCCAGCTC 57 13587253 13587274 CGTTGGATATGGAACAGTTCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 3 2 2 148 2R 20856570 20856654 TAACACAAACTCGCGTCAG 58 20856440 20856458 CCTTACGCTTTCCGAATCC 58 NA Drosophila melanogaster 61 CG2857 FBgn0035078 FBtr0072419 1 1 1 60 2R 20787609 20787628 GTGGTAAGAACACAGATGGT 57 20787568 20787586 AAGTGTTCATCTGACTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3611 FBgn0035069 FBtr0072377 3 1 1 61 2R 20686770 20686790 TGACCAGATCTATCTGACGAG 58 20686813 20686831 TGGCGTACTTGAGGAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lcp9 FBgn0025578 FBtr0072430 1 1 1 87 2R 20667813 20667888 AGTTTGTGATCGTTCTTGCC 59 20667745 20667763 AAGTTAACCTCGGAGTCGC 59 NA Drosophila melanogaster 61 Ir60d FBgn0259187 FBtr0302288 1 1 1 60 2R 20407240 20407259 GATATGCGAGATACTCCCAC 57 20407280 20407300 GTGTATCGTGTATATGCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13589 FBgn0035011 FBtr0072354 3 1 1 208 2R 20380123 20380142 GCCACATTCATAGAACCAGC 59 20379873 20379952 ATCTGCAAGCCCTCATAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ir60a FBgn0034994 FBtr0072274 1 1 1 81 2R 20137807 20137926 CGACTGAAATTCGATGTAAACC 58 20137747 20137767 GTAATCCAGTCCAGTTAGCTG 58 NA Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 2 2 2 85 2R 20017595 20017613 TAGCCTTCGAGACCATCAG 58 20017463 20017548 CGAATAGGTCTTGAGAGTTCG 58 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 1 2 2 80 2R 19938183 19938201 GGACGTTACCTTCATCGTG 58 19938245 19938325 GGATGGGATACCACTTCGT 58 NA Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072096,FBtr0072098,FBtr0072097 3 3 3 63 2R 19587831 19587850 AAGGCGGAGCTCTTTAAGAG 59 19587730 19587754 CTTCGTAGAATGATATGATGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072097 3 1 3 149 2R 19588107 19588335 GGAACTTGGAAGTCATGGC 58 19587976 19587994 TGTAGAGGTTGTCCAGCAG 59 NA Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 2 2 2 80 2R 19520719 19520738 CCTACTATGGACTGTAGCGG 59 19520779 19529773 ATCACCATGTGACAAATCGTC 59 NA Drosophila melanogaster 61 CG30184 FBgn0050184 FBtr0072065 3 1 1 60 2R 19452031 19452050 GCGAATCAGAAGATGCATCC 59 19452073 19452091 GGCTGATGAAGTACAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5360 FBgn0034873 FBtr0072058 1 1 1 81 2R 19414160 19414178 GAGTAAACTGCACAGAGCG 59 19414223 19414345 AAGGAGTTTCTTTCGCTGG 58 NA Drosophila melanogaster 61 Or59a FBgn0026384 FBtr0072023 3 1 1 100 2R 19327934 19327952 AACAGATTCGAGGAGGTGG 59 19327794 19327875 CGTCGGAATAGTTCTAGAATATGC 59 NA Drosophila melanogaster 61 CG13550 FBgn0034853 FBtr0072010 2 1 1 105 2R 19255882 19255900 ATGAGCTCTATGAGGGCAC 59 19256026 19256044 TCCGTTCCAGTATCCATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3500 FBgn0034849 FBtr0072038 3 1 1 144 2R 19244489 19244507 GGCATCATGAGTGGATTCC 58 19244178 19244381 TAAAGTAAGCCAGCACCTG 57 NA Drosophila melanogaster 61 CG9899 FBgn0034829 FBtr0071969 1 1 1 80 2R 19048151 19048259 ATGACAGCCAGAACCTATATGG 59 19048295 19048318 GATCATGTTGTAGTTGAAGGTAGC 59 NA Drosophila melanogaster 61 CG30187 FBgn0050187 FBtr0301927 2 1 1 80 2R 18805707 18805790 CTTTAATGCCCTTATTCGTCCA 58 18805648 18805666 TTAAAGGTCCGCATGTTGC 59 NA Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 3 2 2 80 2R 18778566 18778646 TATAAAGGGATTCCTGAGCCA 58 18778687 18778706 ATCTCCATTAAGGTGTGCAG 57 NA Nonspecific Drosophila melanogaster 61 CG2852 FBgn0034753 FBtr0071933 3 1 1 159 2R 18533526 18533544 TTTGACATCACCATTGGCG 59 18532999 18533017 TGAAGTCCTTGATGATGCG 57 NA DesignNoJunction Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 2 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213336 18213357 CGTAGTCATATTGAGAGTCGCT 59 NA Drosophila melanogaster 61 CG6758 FBgn0034704 FBtr0071767 2 1 1 81 2R 18064197 18064218 AATTTAGCTCTAAGGTGTCGTG 58 18064260 18064335 CCATTCGAAAGGGATCCTC 57 NA Drosophila melanogaster 61 CG4363 FBgn0034663 FBtr0071740 1 1 1 87 2R 17722272 17722359 TCTACGATGAAGCCAAGGT 58 17722203 17722221 CAAGAGCGATTGTCATTGC 57 NA Drosophila melanogaster 61 lox2 FBgn0034660 FBtr0071745 3 1 1 81 2R 17677501 17677574 GGAGATCAGGGCATTTCCA 59 17677438 17677456 TCAGGTCTGTCACATCCAC 59 NA Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071746 3 1 2 116 2R 17607183 17607373 ATTTCCCGAGCAATCAAGTG 59 17607086 17607105 AGAGATCATCGTCCAATCCA 58 NA InUTR Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071684,FBtr0071685 1 2 2 60 2R 17538436 17538454 CTTTATCGAGAGGAACGCG 58 17538394 17538413 GGCGCTGTATAGAGATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33226 FBgn0069056 FBtr0300930 1 1 1 80 2R 17426160 17426226 TAAGCATAGAAATCATGCACCG 59 17426101 17426122 GCAACATAGTTCAGAAATTGCC 58 NA Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 1 2 2 91 2R 17209381 17209399 GCTTTGTGCTGTCAATTGC 58 17209253 17209329 CGTATGACCCTTTCTGTATAGC 58 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629,FBtr0113100 1 2 2 80 2R 17054330 17054406 AACGTAATGAAGGGAAATGCTG 59 17054271 17054291 CTTGTTAAGGTCCATGCTGTC 59 NA Drosophila melanogaster 61 CG10527 FBgn0034583 FBtr0071541 2 1 1 140 2R 16959299 16960238 TGCCAATCGAAGTCAACAC 58 16959177 16959195 AAATGGGACCGTTCTCCTC 59 NA Drosophila melanogaster 61 CG15650 FBgn0034565 FBtr0071554 2 1 1 211 2R 16865710 16865729 TATTAATTGCTGCACTGGCC 59 16865446 16865464 GTCCAGATAGTCCAGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 Rx FBgn0020617 FBtr0071518 3 1 1 93 2R 16804838 16804859 GTGGAGAAGTTCAAGAATCTGG 59 16804912 16805970 CGTTGCTATCTTCCGTTGAG 59 NA Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 2 1 1 80 2R 16757934 16757952 ACTGTCTGAAGATCTGCGG 59 16757996 16758078 CATGAATGACTTGGGTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13423 FBgn0034513 FBtr0086217 3 1 1 80 2R 16424666 16424686 TTATGCCCAAGAAATGCTACC 58 16424725 16424807 ATTCACGTAGCTTACTCTTCAG 58 NA Drosophila melanogaster 61 Ir56d FBgn0034458 FBtr0086497 3 1 1 60 2R 15400425 15400444 GAAGGGCTATTTGGTAAGGA 57 15400384 15400403 ATCCGATTTAAAGACCCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hpo FBgn0261456 FBtr0086500 2 1 1 177 2R 15383114 15383132 CATGATAGCGCATGCAGAG 59 15382898 15382974 TACCATAGTGCCCAAGTTCG 59 NA Drosophila melanogaster 61 CG18607 FBgn0034429 FBtr0086514 2 1 1 60 2R 15176889 15176910 TATCCCGATAATGTGAATGCAG 58 15176930 15176949 CGTTATCCTCCACATTCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15098 FBgn0034398 FBtr0086629 2 1 1 98 2R 14721536 14721554 AATATTGCAATGCTGGCCC 59 14721276 14721474 ATACCAGGTCAGCAAGAGC 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 1 2 2 112 2R 14697625 14697643 ATTCTTTGCCCTTACGGTG 58 14697465 14697550 CCGACCAATTATACTCGGGA 59 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 2 2 2 102 2R 14273055 14273074 GAAGAGCCTGACGTTATTGG 58 14272917 14272935 ATCATGGGAGCAGTTTACG 57 NA DesignNoJunction Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 1 5 5 80 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042924 14042942 TAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 1 4 4 80 2R 13312000 13312086 CGGTTAAGAAGGGACATCTC 57 13312126 13312147 GGAGGGCTTAACCATATTAAGG 58 NA Drosophila melanogaster 61 inaC FBgn0004784 FBtr0087047 2 1 1 80 2R 12787050 12787132 AAGTTGATATTAAGGAGGCAGC 58 12787171 12787191 GCATTTGCACTGCAATATAGG 58 NA Drosophila melanogaster 61 CG15617 FBgn0034151 FBtr0087083 2 1 1 71 2R 12633669 12633689 AAAGAATTCGCGATACGTTCG 59 12633559 12633577 CAGGTCCAATCCTCCTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 2 3 3 80 2R 12454485 12455296 CGAATTGGAGAAGATCCAGC 58 12455338 12455357 AGTAGAATCTTCCCGAACCA 58 NA Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0113086 2 1 2 77 2R 12422579 12422597 TTAGAGTTACGTGGCTCGG 59 12422703 12422722 CATGTTCTTGTACGAAGGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nup62 FBgn0034118 FBtr0087150 1 1 1 60 2R 12232674 12232692 AAGACCACAGACTCATCGG 59 12232716 12232734 CCTCAAGTTGGTGGTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089589,FBtr0089592,FBtr0089590,FBtr0089591 3 5 5 88 2R 12023787 12023805 GATCAGTAATGCCACCCAG 58 12023855 12023939 CATCAGAGTATTCCTGAGAGG 57 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0302163,FBtr0301313,FBtr0100388,FBtr0100387,FBtr0087315 2 6 7 81 2R 11669324 11669343 CAGCGATGAATCTATTGCGG 59 11668569 11669280 CTTCTTGAAGTTGACGCCG 59 NA Drosophila melanogaster 61 Hr51 FBgn0034012 FBtr0114456 1 1 1 88 2R 11219144 11221094 TTCTCAAGAACTCCACAGTCC 59 11221144 11221162 CCGTTGATGTAGGTGGAGG 59 NA Drosophila melanogaster 61 CG8531 FBgn0033918 FBtr0087538 2 1 1 102 2R 10145865 10145945 TTCATCAAAGAGCGACCTG 57 10146010 10146029 GTGAATCACTTCGAACTGGT 58 NA Drosophila melanogaster 61 Tango7 FBgn0033902 FBtr0087579 2 1 1 84 2R 10051636 10051710 TCCATCATGATCACGATACCC 59 10051572 10051590 GAAGATTGGGAGCCTTGGT 59 NA Drosophila melanogaster 61 CG33470 FBgn0053470 FBtr0087656 2 1 2 60 2R 9300125 9300146 ATAGGAATGGTCATACCATCGT 58 9300167 9300241 CCGTTTCAGTAGTGCTGAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG4627 FBgn0033808 FBtr0087738 1 1 1 175 2R 9102397 9102482 ATCAATGCAATGCTGGAGC 59 9102621 9102639 ATACTATAGACGGTGCGCC 59 NA InUTR Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 2 2 2 80 2R 8887549 8887665 CTTATAAGCTTATCCCTGGAATACC 58 8887702 8887721 CAGGTAAATAGTGGGAGGCA 59 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644,FBtr0302645 1 2 2 87 2R 8636958 8637039 CAGCAGAAGATTGTCTACTCC 58 8637088 8637106 TCGAACGGATGTTAACCAG 57 NA Drosophila melanogaster 61 CG30054 FBgn0050054 FBtr0302389,FBtr0302388 2 2 2 83 2R 8512524 8512544 GTGCTACGTATGTTTCAAAGC 58 8512588 8512785 GTTCTCCGTATCTGTAGCAC 57 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 3 4 4 81 2R 8467280 8467298 GAATACGTTCGAGGACACG 58 8467115 8467237 ATTGGAGACAACCTTATCCAG 57 NA Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 3 2 2 81 2R 8309523 8309597 GTGCTAGATGATGCAACCT 57 8309460 8309480 TATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 CG13157 FBgn0033732 FBtr0087925 3 1 1 91 2R 8304369 8304671 CGGCAGATGCTATTGATGC 59 8304725 8304744 GGAATAGGCAGGATTCTGGT 59 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917,FBtr0087916 3 3 3 93 2R 8275435 8275818 GAAAGTATAGGTCGCTATCATCAC 59 8275869 8275888 AGGGATAGGGAATGTGATGG 58 NA Drosophila melanogaster 61 CG13155 FBgn0033723 FBtr0087956 3 1 1 107 2R 8267378 8267397 TATACCCGCTACAATCGGAG 58 8267228 8267308 GAATCTTGCCAGGATCCTG 58 NA Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 1 1 1 97 2R 8264214 8264294 ACTGCTCTTCATAGCAGCC 59 8264352 8264373 CCTGTCTGATAATTGGAATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30043 FBgn0050043 FBtr0087907 3 1 1 80 2R 8248209 8248289 ATGGTAACATAGCTGGTTTGG 58 8248328 8248349 CGTTCTCATAGGTATCAAAGGC 59 NA Drosophila melanogaster 61 CG30043 FBgn0050043 FBtr0087907 2 1 1 80 2R 8248208 8248289 TATGGTAACATAGCTGGTTTGG 58 8248326 8248348 GTTCTCATAGGTATCAAAGGCTG 59 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088013 2 1 3 104 2R 8055699 8061607 GAATAATAAACTCGACCCAGTG 57 8055616 8055634 CAAGACGAAGTCGAGATGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 1 3 3 121 2R 7855430 7855448 GTATTCACGGGAAACTCGC 59 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 Buffy FBgn0040491 FBtr0088077 3 1 1 105 2R 7575232 7575326 CATTTCTCAGGGTCGTTGC 59 7575395 7575413 CAGTATGCTACGTATGCGC 59 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 1 2 2 175 2R 7300282 7300300 TTGATCCCTCCCTGAACTG 58 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA Drosophila melanogaster 61 CG30022 FBgn0050022 FBtr0289990 2 1 1 132 2R 7275407 7275519 AGTTGAAGTATGCCATCAACAC 59 7275296 7275314 TCATTCAGGTGACGATCCG 59 NA Drosophila melanogaster 61 CG13229 FBgn0033579 FBtr0088206 3 1 1 89 2R 7028776 7028794 ATGCACTTCACCCAGATCC 59 7028490 7028724 GTTCGGATGTCTGATAGCCA 59 NA Drosophila melanogaster 61 mthl13 FBgn0050018 FBtr0088220 3 1 1 82 2R 6679250 6679272 CACTGCTAATAACATCGTTCTGG 59 6679313 6679390 GGTTCCGTTCTTGTACAACG 59 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 2 2 2 83 2R 6208324 6208401 TCACCACTGATATTGAATCTCC 57 6208445 6208463 TATCCTTTGCTGAGTCAGC 57 NA Drosophila melanogaster 61 CG12209 FBgn0033498 FBtr0088364 2 1 1 80 2R 6134255 6134274 CATTCTGATCGATATGCCGT 58 6134135 6134213 TGGTACATCACGAACAAGAG 57 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 1 2 2 105 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009869 6009887 GTGTCAATTTCCACCTGGC 59 NA Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088410 3 1 2 179 2R 5984067 5984086 TAATGGATCCGTCTGGACAG 59 5984636 5984758 ATGACGTCAATCAGTGGGT 59 NA InUTR Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 1 4 4 101 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880558 5880576 GTAAAGATCATCGTCGCCG 58 NA Drosophila melanogaster 61 CG12140 FBgn0033465 FBtr0088384 2 1 1 81 2R 5798776 5798905 AAATGCACAGAGTTCGGAG 58 5798947 5798968 GTGGTTATCCTGGGATATTTGG 58 NA Drosophila melanogaster 61 prel FBgn0033413 FBtr0300293 1 1 1 84 2R 5311891 5311910 AATTGGTGCCAATCACACTG 59 5311957 5312053 TGTCCCTGATCTTTGCGAG 59 NA InUTR Drosophila melanogaster 61 CG8800 FBgn0033408 FBtr0088555 3 1 1 61 2R 5283295 5283315 GAAGTGCCTCAAGGTATTGTC 59 5283200 5283272 CTTCCAGCCCGGATATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 TXBP181-like FBgn0026326 FBtr0088599 3 1 1 82 2R 5178774 5178850 TAGGAGTTTCACCCAATAAGC 57 5178712 5178730 CATATTGAGGGAAGAGGCG 57 NA Drosophila melanogaster 61 Tom7 FBgn0033357 FBtr0088657 2 1 1 102 2R 4839312 4839331 GGGAGTTAAGGATCGTTTGG 58 4839395 4839523 AGCTCCCTTCATAAATCCCA 58 NA Drosophila melanogaster 61 CG8252 FBgn0033344 FBtr0088682 3 1 1 60 2R 4797189 4797209 CTATTGAAGCATTATCCCGTG 57 4797149 4797167 AGTAGAGCGTGTTGTAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8252 FBgn0033344 FBtr0088682 1 1 1 60 2R 4797189 4797210 TCTATTGAAGCATTATCCCGTG 58 4797150 4797168 GTAGAGCGTGTTGTAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8584 FBgn0033322 FBtr0088724 1 1 1 60 2R 4588658 4588676 CGCATGTAGACGAGTTCCT 59 4588616 4588635 GCCGTATAGATCACCAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8635 FBgn0033317 FBtr0088727 1 1 1 101 2R 4518512 4518590 CCACCACGGATATTATTTGCA 58 4518431 4518449 GACGGTAGATGCACTTTCC 58 NA Drosophila melanogaster 61 whip FBgn0250827 FBtr0112411 1 1 1 60 2R 4250115 4250135 GTACTCAGCTCCATTTGTCAG 58 4250075 4250096 CTTCTTAGGCAGACTAGGACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8791 FBgn0033234 FBtr0088849 3 1 1 84 2R 3816245 3816263 TTACAGCCAGCAGGATCAG 59 3816311 3816391 ACAGGCATAGACTGACTGG 58 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 2 2 2 119 2R 3803014 3803413 GTTTATAGGCTCCGACTTTCC 58 3802915 3802935 GTCCTCTTCGTCACTATTCAC 58 NA Drosophila melanogaster 61 cathD FBgn0029093 FBtr0088898 1 1 1 91 2R 3710117 3710136 GTACCTCACTAATTGCTGCG 59 3709982 3710063 AACCACATACTGACCACCG 59 NA Drosophila melanogaster 61 Vps13 FBgn0033194 FBtr0088910 1 1 1 80 2R 3456399 3456417 AGAACCTCAAGATACGGGA 57 3456460 3456545 CTAGTTTGCCCAAGTAACCA 57 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 1 2 3 194 2R 3330873 3330958 TTTCCCATCCTCAAGTGCA 59 3331116 3331134 CACCTGGTAGCGGATACAG 59 NA Drosophila melanogaster 61 Spn43Aa FBgn0024294 FBtr0089041 3 1 1 95 2R 3036514 3036592 TGGAGCTAGTTATGCTGCC 59 3036651 3036669 TTGTCGCGAATGATGAACG 59 NA Drosophila melanogaster 61 Tsp42En FBgn0033135 FBtr0089034 2 1 1 101 2R 2940650 2940668 TTGTCCAGATCTTCGTGGG 59 2940731 2940815 AGATCACATAGCTCCAAACCA 59 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 3 1 1 290 2R 2894137 2895248 GATCGTTGGCATCCTACTG 58 2895564 2895583 AGATTGGACATATCGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 1 2 2 80 2R 2558899 2559028 TGGACAAGTTCTACTGGTACG 59 2558839 2558860 CCAGCAGTGAATAGATAAAGCC 59 NA Drosophila melanogaster 61 CG14590 FBgn0033061 FBtr0086022 3 1 1 93 2R 1967766 1967784 TGTAGGCTGTTACACTCCG 59 1967636 1967654 CATTGACTCGTGCTTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 3 2 2 80 2R 1898045 1898127 GAAATCTGGTACAATGGACCC 58 1898169 1898187 TGTATAAGCTTGGTGTGGC 57 NA Drosophila melanogaster 61 Tsp42A FBgn0033042 FBtr0086045 2 1 1 60 2R 1683607 1683628 CTTTAAAGATGTGCAATCGCTC 58 1683646 1683667 TACCAGTTCTGAAGACTCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 1 5 5 80 2R 19474 19550 AATCACTTCAGTTGAGGTGG 57 19590 19611 CAGTCTAAATCAAGGAGATCGT 57 NA Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0302386,FBtr0111259 3 2 4 87 2L 22432992 22433012 TTCTAAACTCGGATCAACTGG 57 22433114 22433132 TACCGAAATCGGTCAACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999,FBtr0085908 1 2 2 65 2L 21773018 21773036 ATCAGTGTGGGACATGTGG 59 21766132 21766155 GGCTAATCTCATGAAGTTTAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 His3:CG33824 FBgn0053824 FBtr0091828 1 1 1 60 2L 21469831 21469850 CGCTCAAGACTTTAAGACGG 59 21469873 21469891 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8679 FBgn0032934 FBtr0081488 3 1 1 60 2L 21217575 21217595 GGACTTCAACTATAAGGAGCA 57 21217535 21217554 ATTCTTCGAATTGTCCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8679 FBgn0032934 FBtr0081488 1 1 1 60 2L 21217638 21217656 CCCTGTTCCATCAGTACGA 58 21217596 21217617 TCCTGACTAATAGCATCATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 3 3 3 93 2L 21172391 21172470 ACGATAAGATCCAGCCCAC 59 21172527 21172545 TCGCCATTCTTGATTTCGG 58 NA Drosophila melanogaster 61 CG33509 FBgn0053509 FBtr0091449 3 1 1 82 2L 21085576 21085651 AAGCTCTTTCCAACGTAAAGTG 59 21085515 21085539 CTTTAGCTTAATGTTCTCCAGTACC 59 NA Drosophila melanogaster 61 CG9265 FBgn0032910 FBtr0081507 2 1 1 91 2L 21062325 21062343 ATTGCAAGGGCTATGTGGT 59 21060029 21062273 CAGAGTGATATCACCAACTTCG 59 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404,FBtr0081405 2 2 2 108 2L 20645740 20645758 TTTACACTCGACGGACGAC 59 20645433 20645671 TGAACTTATTTACACTGCGCTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 neb FBgn0004374 FBtr0081332 2 1 1 249 2L 20077180 20077199 AAAGTAATTGCTGCTCTCGC 59 20087761 20087779 TTACCTTCACCCGGTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 2 2 2 81 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488501 TAGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0081167 2 1 3 105 2L 19119392 19119413 GCCACATACCCATTAGTAACAC 59 19119231 19119326 TCCATGTCGATCGAAACCT 58 NA Drosophila melanogaster 61 CG31752 FBgn0051752 FBtr0081119 3 1 1 99 2L 18840974 18840995 TTCTAACCATGAAGACCATGCT 59 18840730 18840919 GTGTTCTATGACTGGTTTCTTCTC 59 NA Drosophila melanogaster 61 CG17325 FBgn0040993 FBtr0081102,FBtr0299685 1 2 2 291 2L 18813143 18813319 GTCTATCTAAACACCTGTCTTCC 58 18813570 18813588 TTCCGCAGGAAACTATCCG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ncm FBgn0086707 FBtr0081088 3 1 1 108 2L 18448329 18448347 ACCACCAATGGAAGTAGCA 59 18448083 18448260 CTTCGTCTTTGTCGGTTATCTC 59 NA Drosophila melanogaster 61 CG7094 FBgn0032650 FBtr0080990 2 1 1 60 2L 17554781 17554801 ACCTATGTCAGGAATCTTGGT 58 17554741 17554762 ATATCTGGCGAAGATAAGTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb11 FBgn0032634 FBtr0081011 3 1 1 87 2L 17410024 17410099 CATGATCCGCAACCAACTG 59 17409955 17409973 GATGACGAACTTGTGCTCC 58 NA Drosophila melanogaster 61 glu FBgn0015391 FBtr0080935 3 1 1 86 2L 16736015 16736097 AACTCCAGGATAAATACACCAG 57 16735950 16735968 ATAGAAAGCGGTTCGTACG 57 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938,FBtr0080939 2 2 2 83 2L 16701451 16701472 ACCTTCAAGTATGCTACATCAC 58 16701296 16701407 CATAAAGGCGTAGTCGCAC 59 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 2 3 3 91 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451922 16452206 GCATCATAGTACCAGCTGG 57 NA Drosophila melanogaster 61 crp FBgn0001994 FBtr0080854 2 1 1 80 2L 16287138 16287159 GAGGAAGTTATTCTAGAGCACG 58 16279151 16287100 TGAATCCTCTAGTTGCAATTGC 59 NA Drosophila melanogaster 61 CG31819 FBgn0028893 FBtr0080821 2 1 1 81 2L 16213018 16213134 GCCTATCAGTCCATGTACTC 57 16213176 16213196 GTCGACATTGATGAATTACGC 58 NA Drosophila melanogaster 61 CG31819 FBgn0028893 FBtr0080821 1 1 1 80 2L 16213017 16213134 TGCCTATCAGTCCATGTACTC 59 16213174 16213194 CGACATTGATGAATTACGCGT 59 NA Drosophila melanogaster 61 CG18477 FBgn0028864 FBtr0080756 2 1 1 60 2L 15661229 15661249 CTAGGATGTGTTTCAACTGCG 59 15661266 15661519 GTCTAGGCTCCTTGATTATTAGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7631 FBgn0028945 FBtr0080754 1 1 1 80 2L 15628834 15628852 GGACAGCTATCCGAGACAC 60 15628894 15628976 CACATGAGGAGCATCAAACTC 59 NA Drosophila melanogaster 61 CG15255 FBgn0028950 FBtr0080785 3 1 1 60 2L 15611492 15611511 AATGGCCTTATCAACACGGA 59 15611451 15611471 CTGATATCCTGTAGACCACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4161 FBgn0028892 FBtr0080735 1 1 1 60 2L 15434083 15434101 AGGAAGATAGCAAGGACGA 57 15434123 15434143 AGTATCCTATCGATGTCAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 2 2 2 80 2L 15052134 15052488 GAGAATCTGATATACACTTACACGG 59 15052078 15052096 ATCACCTGTGTAGATGGGC 59 NA Drosophila melanogaster 61 NC2beta FBgn0028926 FBtr0080695 1 1 1 60 2L 15008080 15008098 CATCTGATCAGTTCGGAGG 57 15008120 15008140 CGTTTATCGTCTTCTTGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0100163 1 1 2 80 2L 14812302 14812321 AAGTGAACCACTATAGGCAG 57 14812363 14813399 CACCTATGTATATTCGCCGA 57 NA Drosophila melanogaster 61 nimB3 FBgn0054003 FBtr0100058 3 1 1 89 2L 13967805 13967823 TGGATCCTGTTACGCAGTG 59 13967678 13967753 GATTGATGGTTTCCACGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 nimA FBgn0261514 FBtr0299659 3 1 1 100 2L 13961941 13962126 AATCAAACGAGGCACAACC 59 13962189 13962208 CGAGTAGAGTGACTCCTTCC 59 NA Drosophila melanogaster 61 CG9377 FBgn0032507 FBtr0080474 3 1 1 82 2L 13360783 13361275 CCGATAAACTCCCGACTCC 59 13360719 13360740 AAGGTAGTACCAGAGATCATGG 58 NA Drosophila melanogaster 61 CG9928 FBgn0032472 FBtr0080496 1 1 1 60 2L 13142694 13142714 GTTCTGATGACGATAGGACTC 57 13142654 13142675 CTATCATTGCCACTGTTATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31763 FBgn0051763 FBtr0080356 3 1 1 62 2L 12374010 12374028 CCATGTCCACAAACATGGC 59 12374054 12374072 AATACGTTGCCGTTATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31759 FBgn0051759 FBtr0290240 3 1 2 121 2L 12207895 12207916 GTTTGCCGATTGTAAATAGGTG 58 12208056 12208074 GATCGGCGTTGAAGAAGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6734 FBgn0032395 FBtr0080312 3 1 1 158 2L 12019226 12019244 AAGAGCATTCACGAAGACC 57 12019026 12019104 GCCACTCAGTTTGTATCCA 57 NA Drosophila melanogaster 61 CG18787 FBgn0042125 FBtr0080314 1 1 1 61 2L 11999080 11999156 GTTAAGCAATATCTCAAAGCCG 58 11999040 11999058 GACAAAGGCCACATCTTGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 1 4 4 101 2L 11258906 11258990 GAATACATTCGGCATGGGC 59 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 2 3 3 168 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976004 10976023 AACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301005,FBtr0301006 3 3 3 80 2L 10581305 10581325 ATGAACACAACTCAAGGAACG 59 10581190 10581267 CTGCAGCCAGTATTTCATATCAG 59 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 2 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512940 GCGATAAACAGATAACGGGAG 59 NA Drosophila melanogaster 61 CG4953 FBgn0032204 FBtr0079984 3 1 1 88 2L 10266842 10266920 GGCACTCAAAGTTATGCGT 58 10266972 10266990 ATCTCTGGACCAAATCCGT 58 NA Drosophila melanogaster 61 CG31714 FBgn0032180 FBtr0113032 3 1 1 93 2L 10065303 10065621 GGCAGCTGACAGTATAATTGG 59 10065230 10065248 GTAGGGATTATGCTGCAGC 58 NA Drosophila melanogaster 61 FucTB FBgn0032117 FBtr0079811 1 1 1 80 2L 9430069 9430088 ACTGATGAAACATCTTCCGA 57 9429575 9430027 TAATCCTTCTGCAAGCTCTC 57 NA Drosophila melanogaster 61 CG9468 FBgn0032069 FBtr0079741 2 1 1 80 2L 8780417 8780498 CCTTGGGATTGAAATTCCTGG 59 8780357 8780375 GACCGAAGGGATCGATCTG 59 NA Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 1 1 1 93 2L 8302009 8302027 CAATTAGCTCCCGAATGGC 59 8301878 8301955 TTCTGAAGAAACTCCTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11289 FBgn0031887 FBtr0289952 2 1 1 80 2L 7068631 7068701 ATCTACCGTTTGCACTTTCC 59 7068741 7068762 ATTACTTAAAGCCAGAACCACC 59 NA Drosophila melanogaster 61 Nuf2 FBgn0031886 FBtr0079424 1 1 1 92 2L 7065478 7065499 CAAGACGTACACCTATATGGAC 58 7065347 7065365 TTGTAGTAGGCCAGATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG13998 FBgn0040949 FBtr0079241 3 1 1 60 2L 5956683 5956702 CGATGTTCCAGTTTCTGGAC 59 5956642 5956661 AGTAGGTGAGACCAACTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bchs FBgn0043362 FBtr0079144 1 1 1 80 2L 5919923 5919999 CGGTGTAGTGAGGATGTGG 60 5920043 5920061 GAAGATACCTCCGTGCCTC 60 NA Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 1 2 2 80 2L 5850189 5850207 GTATGGAGCGCTACTTTGC 59 5850250 5850840 CAATGACCATCCTCAGACGA 59 NA Drosophila melanogaster 61 CG31913 FBgn0051913 FBtr0079138 2 1 1 60 2L 5784641 5784661 AATGGAAGATAAGGAGCAGGA 59 5784681 5784701 AGGATTGTTCTGAATACTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 1 1 2 92 2L 5764269 5765976 ATGTTTGGCTCAATGGCTG 59 5764195 5764213 CTCAATGTAGGCATCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 GluRIIA FBgn0004620 FBtr0079106 3 1 1 80 2L 5555677 5555698 CATGTGAACTGATTTCCAATGG 58 5555737 5555848 CGATTTGCGCAACAATATCAC 59 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079086 3 1 4 84 2L 5241494 5271273 AACAACTGGTGAATTCAGTGC 59 5241430 5241448 AGATCCCATTTCCATGCCA 59 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0079032 1 1 2 90 2L 5050009 5050667 TTTCATCAGTCGAACACGG 58 5049937 5049957 CACTATTCTCGAACTCATCCA 57 NA Drosophila melanogaster 61 Tps1 FBgn0027560 FBtr0077431 3 1 1 109 2L 4391591 4391610 GTTGTTTCCTAAAGGCGGTG 59 4391677 4391765 GCCGATGTATTTCAGTAAGTAGTC 59 NA Drosophila melanogaster 61 CG31698 FBgn0051698 FBtr0077612 2 1 1 81 2L 3173531 3173552 TTCTACTTCGTATGCAAGTCAG 58 3173404 3173490 AAAGAAGACGGGCATATCCA 59 NA Drosophila melanogaster 61 Chd1 FBgn0250786 FBtr0077674 1 1 1 83 2L 2980568 2980647 ATCCCGCGATAGATACAGC 59 2980503 2980521 TGATAGCTGCCTTGACCTC 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077683 3 1 4 110 2L 2882826 2882930 AATATAAGCTGCTGGCCAC 58 2882734 2882752 GGAAGGAGATCTTGAGGCC 59 NA DesignRelaxed Drosophila melanogaster 61 Drp1 FBgn0026479 FBtr0077744 3 1 1 118 2L 2582102 2582184 CGATGTCATCGAACACCTG 58 2582002 2582021 TCTGCAAGTTGTCCTTAACG 58 NA Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 3 2 2 80 2L 2579792 2579876 TACCTGAAGCTCTATAGGAACG 59 2579733 2579751 CTCGAAGTACTTGTTGCCG 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 1 4 4 80 2L 2495423 2495442 TGATAACGCTGGAGTTTCAG 58 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 Or22a FBgn0026398 FBtr0077873 3 1 1 80 2L 1521432 1521571 CTATTGGACTATGTTGACGCA 58 1521612 1521631 CAGTACAGTACCGATCAGGA 58 NA Drosophila melanogaster 61 CG5440 FBgn0031331 FBtr0077923 2 1 1 60 2L 1334547 1334566 ATATCACTGCAACATCCACC 58 1334585 1334607 CCATTTCTCCTTCAGGATATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 1 4 4 80 X 16602455 16602473 TTCTGCCCACAATGAATCC 58 16602515 16602594 GGGCATTATATCTTCCTTGGC 59 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 2 2 3 113 X 14474872 14475008 ATCACCGATTCGACATGCT 59 14475627 14475645 GTTTCAGTAGCGCATTGGT 58 NA InUTR Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 3 2 2 116 X 9182500 9182519 GAAACGATGAGAATTGCTGC 58 9182598 9187950 TGAAGCTCTTCCCTCTTCC 58 NA Drosophila melanogaster 61 CG3626 FBgn0029706 FBtr0070652 1 1 1 80 X 4263413 4263499 CCTATAAGGAATTGGATGTGGG 58 4263540 4263558 GGACATAGCCCAATTCACC 58 NA Drosophila melanogaster 61 CG15564 FBgn0039833 FBtr0085770 2 1 1 82 3R 27060873 27060891 AGGAGAGTCTTCGCATGTG 59 27059931 27060827 CAGGTCGTAGTACTCCTGC 59 NA Drosophila melanogaster 61 Takl2 FBgn0039015 FBtr0302204 3 1 1 80 3R 18558623 18558642 AACTGTTGTGGACCTATCCC 59 18558496 18558581 TTTCCTTGTAGAACCTCGGG 59 NA Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 2 1 1 89 3R 11672742 11672763 TACGATGTAATGAAGAACGACC 58 11672813 11672895 TTTGATTTGTCCGCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 topi FBgn0037751 FBtr0082135 3 1 1 81 3R 5601360 5601440 CAATCGGTCTTTCATGGATCTC 59 5601481 5601500 ACTGGACCAAACATGTTGGA 59 NA Drosophila melanogaster 61 Cyp313b1 FBgn0037601 FBtr0081893 1 1 1 80 3R 4470116 4470200 TATAGAACAGCTTCTCGAACCC 59 4470057 4470075 ATCTCCATTTCGGATCGCT 59 NA Drosophila melanogaster 61 CG9780 FBgn0037230 FBtr0078959 1 1 1 85 3R 119077 119482 CTTGATGGACATCGTAGATGC 59 119012 119030 TAACACGTTGCACTACGTG 58 NA Drosophila melanogaster 61 CG13050 FBgn0036591 FBtr0075478 3 1 1 85 3L 16272162 16272303 GGACTGCTACTCATTACAATCG 59 16272098 16272116 GACGGAGATGGTTCTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13481 FBgn0036421 FBtr0113170 1 1 1 60 3L 14362624 14362643 AGTTGCTGGATTCTGATGTC 58 14362583 14362603 TTGTTAAGGACCTCCATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nplp2 FBgn0040813 FBtr0075839 1 1 1 96 3L 13349867 13349887 CTGCCCAAGAATTTCTTACCA 58 13349945 13350118 TTGAAGAGACCCTCAACCT 57 NA Drosophila melanogaster 61 RpL14 FBgn0017579 FBtr0076633 2 1 1 102 3L 8594430 8594448 TACAAACTGGTCGCATTGC 59 8594512 8594764 GGACCATCTACCAGAACTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 tan FBgn0028980 FBtr0077043 1 1 1 124 3L 6048754 6048825 AAGACAACAGGTCACCCAC 59 6048913 6048931 ATTGTCATCGGATTCGGGT 59 NA Drosophila melanogaster 61 RpL23A FBgn0026372 FBtr0072805 2 1 1 155 3L 1667723 1667815 GAAGAAGATCATCAAGGGCG 58 1667587 1667605 ATGATGTTGTACGCGTCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813 1 1 2 90 3L 1638853 1639058 TTCAAGCACAATGCTTGGG 59 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 2 2 2 80 2R 19887931 19887949 GTGGTCTGCTTCTATCGTG 58 19887808 19887889 GATCCATCATTTCGATCTGGT 58 NA Drosophila melanogaster 61 CG16868 FBgn0034498 FBtr0086302 2 1 1 90 2R 16172354 16172428 CAGCGGAGATGTTCTTGTC 58 16172282 16172300 ATCCTCAAGCAGATCCGAC 59 NA Drosophila melanogaster 61 CG14480 FBgn0034242 FBtr0086827 3 1 1 139 2R 13452822 13452904 TAGACAAGAAACTGCAAGCT 57 13453006 13453024 GGCTACTTTACTGGTGGTG 57 NA Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087444 1 1 2 124 2R 10695976 10696082 TCGTCTTTATCCATACCGCT 58 10696799 10696817 AGTCCAAGGTGAAGAAGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0087938 2 1 2 83 2R 8386167 8386188 GCTATTTACTTCTCTTTGGTGG 57 8386231 8387475 CAGAAGTCTCGTAGCATCTC 57 NA InUTR Drosophila melanogaster 61 CG30490 FBgn0050490 FBtr0088209 1 1 1 60 2R 7006857 7006876 GATCTAGGAAACGGGAAGTG 57 7004526 7006837 TTGATATTATTCCCGCTTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG18806 FBgn0042129 FBtr0081307 2 1 1 60 2L 19966129 19966147 TCATTCGAGCTGAACAGAC 57 19966087 19966108 CAATCGAAATGATGCTTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10336 FBgn0032698 FBtr0273194 2 1 2 184 2L 18689702 18689786 CTGTGAATGTTTCGGCCAC 59 18689934 18689952 CACTATCTGGGCATCCTGG 59 NA InUTR Drosophila melanogaster 61 CG6583 FBgn0032420 FBtr0080358 2 1 1 124 2L 12171919 12172129 AGAGGATTCATCTGGGACG 58 12171813 12171831 CACTCCTCCCAGTACACTC 58 NA Drosophila melanogaster 61 Lrr47 FBgn0010398 FBtr0080092 3 1 1 86 2L 10517922 10517941 TAGTGAAGCTGAGCTTCGAG 59 10517990 10518069 CCGAGGGAATCTTGGTCAG 59 NA Drosophila melanogaster 61 CG5676 FBgn0032200 FBtr0080086 1 1 1 80 2L 10255128 10255147 TAAGAGCGTGGATAAGCTCG 59 10255004 10255090 TATCTTTCGGTCTTATCCTTCCAG 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 3 2 2 88 2L 9940568 9940649 ACTAAACTCAACAGAAATGGCC 59 9940696 9940716 CAACCTTGGATTCTTCTCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276,FBtr0300874 3 3 3 61 2R 20090088 20090266 TCAATAGCGGCAAATTCCA 57 20090045 20090063 ATATCGCAGCGTATTCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 hoip FBgn0015393 FBtr0079846 3 1 1 97 2L 9699930 9700016 CCAATATGACTGAGGAAGTTAATCC 59 9700070 9700089 GTAGTTCAATGCTTGCTGCA 59 NA InUTR Drosophila melanogaster 61 CG15450 FBgn0031132 FBtr0077280 3 1 1 105 X 20693220 20693238 TTTCGCTTCCTTTACCGAG 57 20693304 20695331 GTTGAATTAACATGGCTAGCTG 58 NA InUTR Drosophila melanogaster 61 CG30378 FBgn0050378 FBtr0088854 2 1 1 60 2R 3838380 3838400 TTGTTCCAGGACATTGATCAG 58 3838420 3838440 CGGTAACAAATTCGTTGAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0070729 1 1 5 131 X 4824086 4830054 GTATTTAAGCACAAATGCAGCC 59 4823976 4823996 GGTGTTCACTGTTATTGTGCT 59 NA InUTR Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0088885,FBtr0113374 2 2 2 60 2R 3817781 3817799 CCGATAAGCTGTACTGCCT 59 3817739 3817759 TCCTTGATATGGTTCTCGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31769 FBgn0051769 FBtr0080602 3 1 1 97 2L 14110566 14110641 TCAATTACGGATGGGAGCA 58 14110487 14110506 TTACGACTGTTTCAAGCACG 59 NA Drosophila melanogaster 61 nimC3 FBgn0001967 FBtr0290243 1 1 1 60 2L 14020098 14020116 GATCCACTTGGTGGAGGTC 59 14020056 14020076 GATGTTCTTCTGGCAATGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8142 FBgn0030871 FBtr0074472 2 1 1 85 X 17738589 17738607 GACAAGAGCCAGGGTACTC 59 17738446 17738464 ACATCATCCACATTGCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 PGRP-LE FBgn0030695 FBtr0074183 3 1 1 109 X 15696003 15696024 GCAACTGCCTGTTAAATATGTG 58 15695628 15695718 ACTCAATGTGGAAGCACTG 58 NA Drosophila melanogaster 61 Gycbeta100B FBgn0013973 FBtr0085753 3 1 1 81 3R 26980503 26980665 TGTACAAGGTTGAAACAGTTGG 59 26980707 26980725 ATGCACTTGGCATGATCCT 59 NA Drosophila melanogaster 61 Ugt86Dd FBgn0040256 FBtr0113321 3 1 1 104 3R 6953719 6953798 TCGCAGACGAGATGATGAG 59 6953633 6953653 CGTCCTCCATAGTTACATCGA 59 NA Drosophila melanogaster 61 CG5199 FBgn0036994 FBtr0078224 2 1 1 125 3L 20444347 20444982 GACATAAGCGCTTTGGAGC 59 20444240 20444258 GTTTAGATGCATCGACGCC 59 NA Drosophila melanogaster 61 CG13676 FBgn0035844 FBtr0076732 1 1 1 80 3L 8138570 8138588 GATCCACTTCAAGTGCGAG 58 8138223 8138527 ACGCAATGGTGATAGATCTG 57 NA Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 1 2 2 100 X 11476639 11476657 CTCTTCACTTGCACTTCGC 59 11476498 11476576 TCGCCTAGTCTAATCAGCTG 59 NA Drosophila melanogaster 61 CG41503 FBgn0085787 FBtr0302230 1 1 1 109 YHet 305922 305940 AACAATCGTGACAACAGGG 58 306013 306502 TCAATTGACTTGACGCCAG 58 NA Nonspecific Drosophila melanogaster 61 snoRNA:MeU6-A47 FBgn0025882 FBtr0077222 1 1 1 72 X 21257930 21257948 AAACCACAAATGCAGGGAG 58 21257876 21257896 CAGCGAGAAGATTAGTTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14613 FBgn0031188 FBtr0077367 1 1 1 80 X 21873120 21873201 TACTACCTGTCAAAGAGTGGC 59 21873060 21873081 CACCTTCTCAATGATGTTCTCG 59 NA Drosophila melanogaster 61 Sep1 FBgn0011710 FBtr0077198 1 1 1 115 X 21230625 21230643 GTTCACCCTAATGGTGGTG 58 21230721 21230806 TTTGTTTCTCTATGGCGTCC 58 NA Drosophila melanogaster 61 Rad51D FBgn0030931 FBtr0074592 2 1 1 60 X 18394662 18394682 CTAGATGAGCCTAAGATTGCC 58 18394704 18394722 CCTGGAGCAATCGATAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7135 FBgn0030895 FBtr0074515 3 1 1 85 X 17998605 17998786 GCAGGTGAAGATTATTGACTTCC 59 17998831 17998849 GTTCCAAGCTGGTGTTCAG 59 NA Drosophila melanogaster 61 CG5010 FBgn0260747 FBtr0074387 1 1 1 256 X 17043121 17043139 AATTCTTGCGTGAAACCGA 58 17044009 17044027 TCTGCTGGAACATCGATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9676 FBgn0030773 FBtr0074364 1 1 1 109 X 16593881 16593954 GCAACAATGTAGCTCCAGC 59 16593790 16593808 GTAATTGGGATGCACGGTG 59 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 1 3 3 97 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 2 2 2 176 X 16110288 16110307 AACTCGCTGCTAAATTAGCA 58 16107225 16107243 TAGATGGGAGTGCACATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11581 FBgn0030540 FBtr0073892 2 1 1 60 X 14070998 14071016 GTTGTGGTCCTACTTCTGC 58 14071040 14071058 TATATTCCCTGGGCAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2540 FBgn0030411 FBtr0073675 2 1 1 60 X 12524643 12524664 AATCGCGAATACCTATTCAACC 59 12524685 12524703 CTACAGCTCCCGGAAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 2 4 4 140 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698360 11698378 GTCAACTGATTCTTGGCGG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 1 5 5 132 X 11029017 11029035 CAAGGACATGCTCATCGTG 59 11027710 11028925 GGCTGTGTATTTGTATACCATGG 59 NA Drosophila melanogaster 61 feo FBgn0030241 FBtr0073410 1 1 1 60 X 10747702 10747721 GGGATCTCACACTTAAGAGC 57 10747661 10747681 CAGTCGTTGTAGTAGTTCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 2 3 3 81 X 10373678 10373696 CTGAAGTACTTGTTCCGCG 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 RabX2 FBgn0030200 FBtr0071448 3 1 1 67 X 10311598 10311618 CTAATGCGTTTCTCGGATGAC 59 10311647 10311665 GCCTTGACATCTATGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 btd FBgn0000233 FBtr0071379 2 1 1 156 X 9589296 9589314 CATCCTCCTCACCATCCTC 59 9589434 9589891 GGAAACTGACTTCTCGCTG 58 NA Drosophila melanogaster 61 CG3823 FBgn0029863 FBtr0070900 3 1 1 96 X 6200317 6200425 AGGAGCAGAGGGATTATCTG 58 6200484 6200502 TCTGTGACTCCGGAATCAC 59 NA Drosophila melanogaster 61 CG4020 FBgn0029821 FBtr0070824 1 1 1 80 X 5800638 5800658 GGCGTACAACTATCAAATTGG 57 5800697 5800772 GCTGAAAGTTACCATACTTGAG 57 NA Drosophila melanogaster 61 mof FBgn0014340 FBtr0070829 1 1 1 60 X 5769733 5769751 CGAAGATGATGCCTTGACC 58 5769691 5769709 TGTTGTGATGACCGTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 3 3 3 92 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654770 5654791 CATGTATAACTCCATCTCCTCG 58 NA Drosophila melanogaster 61 CG32783 FBgn0052783 FBtr0070615 3 1 1 80 X 3839397 3839470 TACTGGAGTGGAAACGATGAG 59 3839509 3839530 TATGATTAGATCGTGCTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG4025 FBgn0025624 FBtr0070375 2 1 1 96 X 1971286 1971304 CCACGGTTCCCTACATCAG 59 1971363 1971494 GTAATTCCAAGCAGAACGCT 59 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 1 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 3 4 4 97 X 423509 423527 AATCTCTTGGAGTTCGCCA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 2 2 2 88 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 180999 181017 TACTGGAAGCTGAAGCCTC 59 NA Drosophila melanogaster 61 CR41571 FBgn0085804 FBtr0114258 1 1 1 60 U 5607635 5607655 CTTCAATGTCGTATTCCTGGT 58 5607595 5607616 TCTAACTCCAATGAATCGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42415 FBgn0259846 FBtr0300143 1 1 1 60 U 6756964 6756982 ATACTTGGCTCAGTGTTCG 57 6756922 6756941 TGCTTTGCTACTCGAATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41561 FBgn0085692 FBtr0114141 2 1 1 80 U 4051907 4051926 TTGGTCGATTCGTAAGACCC 59 4051788 4051866 TACAGCACGGAATACATTTGC 59 NA Drosophila melanogaster 61 CG41423 FBgn0085644 FBtr0114088 2 1 1 103 U 2928020 2928038 CCGACGAGAATCAAACCCT 59 2928104 2928508 CAATCGTGAGGATCCTTTGC 59 NA Drosophila melanogaster 61 zfh2 FBgn0004607 FBtr0089070 2 1 1 80 4 551659 551680 ATGTTAAGTACTGAGGAGACCC 59 551717 551801 GACATCACTTCCTGAAACTTCTC 59 NA Drosophila melanogaster 61 CG31998 FBgn0051998 FBtr0089145 2 1 1 80 4 222001 222078 CAATACCATCGATTCCCAACC 59 221941 221962 GAATGTCACCAGGATACATTGG 59 NA Drosophila melanogaster 61 CG11539 FBgn0039859 FBtr0085868 2 1 1 60 3R 27441492 27441511 AGACTTATTCGCGTGATCAG 57 27441451 27441469 AGGAAGAGATTGGTGTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31002 FBgn0051002 FBtr0085813 2 1 1 97 3R 27220669 27220752 CTTTAATGAGGTCCTTAGGATTGC 59 27220595 27220617 GCACTGTCTTCGTAAGATTAAGG 59 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 3 3 3 101 3R 26991969 26991989 CGGGCTATGGTTTACTTTCTG 59 26989348 26991908 ATCAATGAATCTGAGCTGTCG 58 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 3 1 1 128 3R 26517468 26517575 CTACCTTCTGTCAGTCGGG 59 26517664 26517685 GTTAAAGAGGAGCATCTTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7598 FBgn0039689 FBtr0085473 2 1 1 85 3R 25563163 25563181 AAGTCAACTCGGATCACAC 57 25563230 25563306 AAAGGATTTCCGCACTCTC 57 NA Drosophila melanogaster 61 CG14511 FBgn0039641 FBtr0085412 3 1 1 60 3R 24972192 24972210 TGATCTCCAACATGTGCCT 59 24972150 24972170 TACTGACTCAACCGGTAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085056 3 1 2 275 3R 22451234 22451317 CCTTCATCGTAATGTGCCTG 59 22450978 22450998 CAAGACCGGAATCAATAGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 HLHmbeta FBgn0002733 FBtr0084982 1 1 1 60 3R 21831200 21831218 GCCATCGTCTCAACTACCT 59 21831158 21831176 TGAAGAGGCACTCCAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10560 FBgn0039325 FBtr0084852 3 1 1 83 3R 21144643 21144664 GAACTACTCTAAGAAACTGCCA 57 21144518 21144599 ATAGAGCAAATGAAGGCCC 57 NA Drosophila melanogaster 61 CG31288 FBgn0051288 FBtr0084860 1 1 1 92 3R 21124915 21125030 CTGGAAATGAAAGATGGTAGTGTC 59 21124846 21124864 AAACTCGTTGATGTCGCTG 58 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867,FBtr0084620 2 2 2 114 3R 20212174 20212193 GCTATAATGGACGTGACTGC 58 20212017 20212098 TTTGGCAAGCTGAATATGGT 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 2 6 6 82 3R 20082821 20082911 GCACGGTTATCATGGTTCC 59 20082757 20082776 TAGTCGACTGTAGATGGCCT 59 NA Drosophila melanogaster 61 Ir94h FBgn0039080 FBtr0273205 3 1 1 60 3R 19314043 19314064 GTTACCCTATGTACGACATCAG 58 19314084 19314103 ACACTTAAAGGCTTCTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4723 FBgn0039023 FBtr0084318 2 1 1 60 3R 18589286 18589306 GATCTACCAATCGGAACAGAC 58 18589246 18589264 CACATGACTGCCCATATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18594 FBgn0038973 FBtr0084255 3 1 1 60 3R 18291828 18291848 ATTATTCCCGACATCATCGAC 58 18291870 18291888 CGGAAGGATAGGTGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 2 8 8 80 3R 16148856 16148948 CATTAAGCAACTTGCTTTGGC 59 16148990 16149008 TGGCTGATCTCATTCAGCT 58 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 1 3 3 86 3R 15478732 15478750 GAGAATCGGAGGCCTATCC 59 15478581 15478682 TGGTGTAGCTCTTGTACGC 59 NA Drosophila melanogaster 61 CG31246 FBgn0051246 FBtr0083514 2 1 1 199 3R 13637424 13637444 AACTAATGCTCAGGTAGAGGA 58 13639331 13661882 GTATTCGATGCTGTCACGG 58 NA InUTR Drosophila melanogaster 61 CG17803 FBgn0038547 FBtr0083528 2 1 1 80 3R 13626494 13626514 GCTCAGGATCTATATGACAGG 57 13626234 13626452 TCCTTGTTGTATCCACACC 57 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 2 2 2 95 3R 11865261 11865348 GGAGCATGATCTCAAACCCT 59 11865406 11865424 AAGGTGCTACTACTGCTGG 59 NA Drosophila melanogaster 61 CG34274 FBgn0085303 FBtr0112469 3 1 1 88 3R 11558089 11558162 CTTTGCTTTATCAAGTTACGCG 59 11558211 11558229 GCACGCAGATAATGTTCGT 59 NA Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083157 2 1 2 116 3R 11334279 11334399 TTAACCTAACGCAACTCTCC 57 11334182 11334201 GCGAGAGTATGTCATTCTCG 58 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082603,FBtr0082604 3 2 2 80 3R 8217505 8217578 CGGGTGTCATAATTGCCAG 59 8217443 8217461 CGTAGAGAACTGCAATGGG 58 NA Nonspecific Drosophila melanogaster 61 GstD9 FBgn0038020 FBtr0082608 3 1 1 60 3R 8192410 8192428 GGAGTCGAGGGCTATACTG 58 8192368 8192389 ATAAAGGGAGCCATCTTTATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp313a5 FBgn0038005 FBtr0082619 3 1 1 86 3R 8059639 8059660 TTACTATGGGTGATGAAGTGAG 57 8059517 8059594 GTATTAGGTTGTTAAGGGCCT 57 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113220,FBtr0113218,FBtr0113219 2 3 3 86 3R 7032969 7033092 TATCACAAACTCTCGGGCAG 59 7033141 7033159 CAATCAGGTACTTGCGGTG 58 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 3 2 2 109 3R 5989000 5989018 CCTGCTCCTGTCTAATGCA 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833,FBtr0300565,FBtr0300564,FBtr0082092 2 4 4 60 3R 5521367 5522153 CTTCAGCTCCGACTTCTCC 59 5521325 5521343 GCTCAAATCTGTGCTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 by FBgn0000244 FBtr0082119 1 1 3 282 3R 5356697 5356715 CGAGTCTGACAAGAAGACC 57 5354652 5354670 TAATTCCGCATGATTCCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HP1e FBgn0037675 FBtr0082016 3 1 1 60 3R 5147698 5147722 TATAGCGATGAAGATAATACCTGGG 59 5147737 5147758 CAATAAGTGAATGGCAATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP1e FBgn0037675 FBtr0082016 2 1 1 60 3R 5147662 5147683 ATGGGCCAATTACAATACTTGG 59 5147701 5147722 CCCAGGTATTATCTTCATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0300896 3 1 2 111 3R 4047487 4047505 GAAGGTTTCGCCATTGGAG 59 4047578 4047658 TATTCACTGGAGCTTTGTTCG 58 NA Drosophila melanogaster 61 CG42544 FBgn0260713 FBtr0301214 1 1 1 195 3R 3130468 3130486 AGCGAACTGAAGACAACGA 59 3130645 3130663 AAACATGGCCATAAGTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fer1 FBgn0037475 FBtr0081567 2 1 1 112 3R 2963298 2963579 GACTAAGCAAGGTGGACAC 58 2963655 2963673 GTTACGCTGCAGACTTAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 3 2 2 85 3R 2467215 2467233 AAGAGATCGCCATGGAGTC 59 2467282 2467356 ACTTGGACAGTTTCCAAGC 58 NA Drosophila melanogaster 61 CG15597 FBgn0037420 FBtr0302305 2 1 1 83 3R 2110809 2110889 GTCCGCAATGAAAGTATTCGT 59 2110746 2110764 TTGAGCAGACTGAGGAGAC 58 NA InUTR Drosophila melanogaster 61 pncr008:3L FBgn0047000 FBtr0091957 3 1 1 106 3L 6213766 6213846 AGTATCTAGTTGGCTGCGT 58 6213916 6213934 GGACCTCTAGCTAACCTCC 58 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078348 3 1 3 139 3L 21426792 21428134 AAATGGAAAGGCACTAGCAG 58 21428236 21428254 AATAGTGGAGGGAGACTGC 58 NA InUTR Drosophila melanogaster 61 CG3634 FBgn0037026 FBtr0078272 2 1 1 82 3L 20801864 20801952 CACTTCGTTTATAGAGCAAGTCTC 59 20801805 20801824 CATTGCTGGACTCTGATTGG 59 NA Drosophila melanogaster 61 CG7298 FBgn0036948 FBtr0074859 3 1 1 219 3L 20195799 20196023 CAATCAAACTGCATACAACGTG 59 20195601 20195619 ACTGTCGTCGTAGTAGTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9330 FBgn0036888 FBtr0074940 2 1 1 92 3L 19580839 19580857 GTAGTTTCTCACGATCGCA 57 19580911 19580990 ATAGTTTCCCTTGTATGCCTC 57 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 2 2 2 87 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259703 AATGTACGACCGTGTTGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14079 FBgn0036849 FBtr0075027 3 1 1 72 3L 19091280 19091302 CTACGTAAAGTTAGATCTGCAGC 59 19091389 19091410 CAAATATCCGTGTGAACAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13074 FBgn0036567 FBtr0075496 1 1 1 117 3L 16089249 16089267 CCAATGATGGGTCACTGGA 59 16089090 16089169 ATTAACCAGCGTCCATTGTC 58 NA Drosophila melanogaster 61 CG10749 FBgn0036328 FBtr0075871 1 1 1 60 3L 12966432 12966450 CAAGGGTTCAAAGGACGAG 58 12966474 12966492 CTCCGTGACATCAGACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 2 1 1 124 3L 12185118 12185137 TCTTCACCGAAAGTATGGCA 59 12185224 12185298 CATCTCCGTGGACAGTACC 59 NA DesignNoJunction Drosophila melanogaster 61 CAH2 FBgn0027843 FBtr0076001 3 1 1 120 3L 12173245 12174786 CTTGATTTGTGCTTCTTTGGTC 58 12174865 12174885 GATGTTTATGGGACTCTGGTG 58 NA Drosophila melanogaster 61 CG6038 FBgn0036198 FBtr0076123 1 1 1 80 3L 11704243 11704333 CTAATTCACGAGGGCTCTG 57 11704181 11704199 CCGCCAGTTAAACTTCTCC 58 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 2 2 2 61 3L 11641278 11641355 AGAAGACCTGCGAAGTTCC 59 11641235 11641253 TCTCGTGCTTCAATGTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6418 FBgn0036104 FBtr0076274 2 1 1 60 3L 10869876 10869894 GCCACAGATCGCTATACAG 57 10869834 10869855 GGAACTGATTGTTATACTGGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 3 4 4 127 3L 9893172 9893260 AGTACCACAAAGAGTGGACAG 59 9893343 9893367 GGCTGTGAGATCTTTGATTATACTC 59 NA Drosophila melanogaster 61 eIF4E-3 FBgn0035860 FBtr0076701 1 1 1 80 3L 8223295 8223372 ATAAGCTATCCCTTTGGACGA 58 8223414 8223432 GCAGCAGCTCCTTTATCTG 58 NA Drosophila melanogaster 61 msk FBgn0026252 FBtr0076685 3 1 1 80 3L 8112582 8112600 CTTAACTTGCACCCGATCG 59 8112640 8112724 GAAGGTTTCCTCATAGAAGTCAG 58 NA Drosophila melanogaster 61 CG8281 FBgn0035824 FBtr0076748 2 1 1 60 3L 7906222 7906240 CAAATCATTTGGAGCTCCG 57 7906264 7906282 GCTCCCATAATCCACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mei-P22 FBgn0016036 FBtr0076836 1 1 1 60 3L 7238111 7238129 ACGATCCTTATCTGCTCCA 57 7238153 7238171 GATCTCATCGGGTGTGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0076940 1 1 2 104 3L 6944443 6944461 GATCCAATAACACCGGCAC 59 6944293 6944375 GATTGATGGTCTGGTTGGC 58 NA Drosophila melanogaster 61 Lcp65Ac FBgn0020642 FBtr0076991 3 1 1 110 3L 6138131 6138220 AACTTTGCTTTGGAGACCAG 58 6138293 6138311 CACGAAGGAGTAGGATCCG 59 NA Nonspecific Drosophila melanogaster 61 Bre1 FBgn0086694 FBtr0077116 3 1 1 81 3L 5785848 5785866 GGAGCTGGATAAGCTTCAC 58 5785671 5785803 CGGCAACTGTCGTATATCC 58 NA Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077123 1 1 2 84 3L 5744694 5744960 TCGCTTACATTTAAGCTGAGAG 58 5744631 5744649 CTTGATCTCATCGTCGCTG 58 NA InUTR Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 3 1 1 70 3L 4622736 4622754 ATGTGGATCGCATTCTGGT 59 4622785 4623283 GAACTTCATTTCCTTAGCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 3 3 4 109 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833661 3836031 GTAAATGGAACCACTGCTGG 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 2 5 5 100 3L 1635218 1635236 TGATGATCATCATGGGCGT 59 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9139 FBgn0035202 FBtr0072663 1 1 1 109 3L 1296736 1296754 ACATTGTGCACAACGATCC 59 1296824 1296918 GAAGAGAAATTTGTGGTTCTGC 58 NA Drosophila melanogaster 61 miple2 FBgn0029002 FBtr0072506 3 1 1 90 3L 274022 274114 CAGAGAATGGATCGACTTGC 58 274167 274185 CTTAGGGACAGGACTCGTG 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 2 9 9 80 3L 143206 143522 TTTGTCCATACGCCAAATCG 59 143564 143583 GTTCTCAATAGCTTCCGACC 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 2 3 4 91 2R 10510484 10510502 ATTCATTTGTTGGAAGCGC 57 10510740 10510930 GGGTCACATCATCTTAGGAC 57 NA Drosophila melanogaster 61 CG30430 FBgn0050430 FBtr0072448 1 1 1 131 2R 21016979 21016997 TTTAGTCTTACCCTGGCCT 57 21017148 21017166 GTAGCAAGTTCCACAGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413,FBtr0300956 1 2 6 81 2R 20817347 20817366 AGTGATACCTGTGGACATCG 59 20817232 20817304 CTGAAGAGGTCTCTTCTCCG 59 NA Drosophila melanogaster 61 CG5569 FBgn0034919 FBtr0072128 2 1 1 97 2R 19753215 19753233 TTATGGTCACCGGCTACAG 59 19753294 19753725 CCAGGACAGAACCGATCTG 59 NA Drosophila melanogaster 61 CG3649 FBgn0034785 FBtr0071896 1 1 1 89 2R 18735021 18735039 TGTTTGGGATGAGCAACAC 58 18735092 18735160 ATCGATCCGACTCTTTGGT 58 NA Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923,FBtr0071922 3 2 2 80 2R 18583508 18583589 GGTCACTTAAGTGTGGTCAG 58 18583447 18583466 ATGATGGTCTATCCAAAGGC 57 NA Drosophila melanogaster 61 CG13488 FBgn0034670 FBtr0071723 2 1 1 88 2R 17839262 17839353 ACATGTGTAGCTTGCTGAC 58 17839404 17839423 CAGAGCGTAATCTGATTGCA 58 NA InUTR Drosophila melanogaster 61 comr FBgn0034667 FBtr0071735 3 1 1 60 2R 17754043 17754062 CATCAATAAGAAGGCAGCGG 59 17754002 17754023 GATATGGATACCCAATTGTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppcdc FBgn0050290 FBtr0071672 1 1 1 88 2R 17579806 17579824 TAGATCTAGGCAAGTGGGC 58 17579876 17579951 ATTATCGCAAATCCCGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG15673 FBgn0034639 FBtr0300355 3 1 1 82 2R 17500343 17500361 TTACCTGAGCAGTAGCAGC 59 17497455 17500303 CGATGATTACACCTATCATAATGGG 59 NA Drosophila melanogaster 61 CG30289 FBgn0050289 FBtr0071697 3 1 1 81 2R 17408613 17408694 TGGAGTACTCAGATTATGTTAGGC 59 17408555 17408574 CCGGTAACCGTAAACATTGG 59 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 2 3 3 137 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181863 TACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 Magi FBgn0034590 FBtr0071636 2 1 1 81 2R 17018084 17018161 TCAACGTGCTTAATTCGTCG 59 17018022 17018040 AGGATCATGGTAACCTGCC 59 NA Drosophila melanogaster 61 Obp56f FBgn0043533 FBtr0086328 3 1 1 174 2R 15600952 15600970 TCTCTGCTATCTGGCTCCA 59 15601160 15601180 GCAATAACACCTTTCACTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 3 3 3 93 2R 15280209 15280227 ATGACTATTGTGAGCGCTG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 CG14491 FBgn0034284 FBtr0086803 3 1 1 60 2R 13782805 13782825 CTGCTGTCGAACAAGAATCAG 59 13782847 13782865 ATCGATCCATATGCTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0087079,FBtr0113089 3 4 4 83 2R 12643616 12643634 AAATCATTCCAGAACGCGA 57 12643492 12643569 TAGTATAGCGTCCCTGCAC 58 NA Drosophila melanogaster 61 mRpL34 FBgn0083983 FBtr0111011 1 1 1 111 2R 11986508 11986589 GAATGCTCCAAAGGACCTG 58 11986664 11986682 AAATGGCAGCGTACTTTCG 59 NA Drosophila melanogaster 61 Cdk5 FBgn0013762 FBtr0087350 2 1 1 111 2R 11458468 11458489 GGACCTCAAGAAGTACTTTGAC 58 11458218 11458396 GACATTATGGCTGTGGCAG 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 1 5 5 80 2R 11211645 11211717 GCCTGATGCAATGAAACCC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 CG34184 FBgn0085213 FBtr0112377 2 1 1 80 2R 10253450 10253525 AGTATCCTCCGATATTGATGGG 59 10253562 10253584 TACTACTATCATCTCCACCAGTG 58 NA Drosophila melanogaster 61 AttC FBgn0041579 FBtr0087653 2 1 1 199 2R 9281584 9281666 TACAACAATCATGGACACGG 58 9281828 9281846 ATGTGGGAGTAGTCCAGTG 58 NA Drosophila melanogaster 61 AttC FBgn0041579 FBtr0087653 1 1 1 95 2R 9281583 9281666 CTACAACAATCATGGACACGG 59 9281723 9281741 TTGAACAAATTGGCGGTGG 59 NA Drosophila melanogaster 61 CG13228 FBgn0033588 FBtr0088106 2 1 1 63 2R 7121719 7121737 AAACAGTTCCCGTTGTGTC 58 7121763 7121782 GGTATCGTCTGTATGACGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33476 FBgn0053476 FBtr0088319 1 1 1 60 2R 6298053 6298071 CTGTGGACCATTCTGTGGA 59 6297923 6297943 TCCATGATAAACTTGGAGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG12912 FBgn0033497 FBtr0088365 3 1 1 211 2R 6121608 6121626 CTGACACTACCGAATGCTG 58 6121415 6121433 GAGCCTGCTTCTGTATCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 2 2 2 60 2R 6044820 6044839 CAGACTGTCCCATCAAATCG 58 6044779 6044799 GGGAAGTATCTATGTGTCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uba1 FBgn0023143 FBtr0088499 1 1 1 81 2R 5577412 5577494 CCATCAAGAAAGCTCTGATCG 59 5577351 5577371 TGATCCTCCCAATAAAGACGG 59 NA Drosophila melanogaster 61 CG30344 FBgn0050344 FBtr0088583 1 1 1 80 2R 5034993 5035062 TTTCGACATGGAGGGAGAG 58 5035103 5035124 AGACTGAAGTCCTTAATGGTCC 59 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658,FBtr0088659,FBtr0300599 3 3 3 102 2R 4847045 4847063 GAGGAGTGTTCCTGGTTCC 59 4847127 4847203 TTCCATTGTCCTTGTTGTCTG 58 NA Drosophila melanogaster 61 CG11196 FBgn0033248 FBtr0088870 2 1 1 127 2R 3881840 3882028 GCGACGTAACTACAAGCAC 59 3881731 3881749 CATTCGTTCCGATGGTCAG 58 NA Drosophila melanogaster 61 so FBgn0003460 FBtr0088970 1 1 1 80 2R 3312162 3312315 CTGTGTTTGCGAGGTTCTC 59 3312359 3312377 TTATCACATTGTGGCAGCG 58 NA Drosophila melanogaster 61 snRNA:U5:38ABa FBgn0043022 FBtr0081315 3 1 1 61 2L 19811986 19812010 GGAACACTCTAATGAGTCTAAACTC 59 19811949 19811970 GGCCCAACTAAATATTTAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U5:38ABa FBgn0043022 FBtr0081315 2 1 1 60 2L 19811986 19812010 GGAACACTCTAATGAGTCTAAACTC 59 19811950 19811972 GCCCAACTAAATATTTAGCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tio FBgn0028979 FBtr0089377 1 1 1 99 2L 22020083 22020701 AGTGCAAGTGAGTTAACTAGTC 58 22020761 22020779 CATTCGATGGACATCGGAC 58 NA Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262,FBtr0085931 3 2 2 60 2L 22015765 22015784 ATTCTCCGATATCCCTGCAC 59 22015807 22015825 AGGCACATATCAGTGACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG31613 FBgn0051613 FBtr0085894 1 1 1 60 2L 21425474 21425492 CGCTCAGGACTTTAAGACG 58 21425516 21425534 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33910 FBgn0053910 FBtr0091914 1 1 1 60 2L 21418592 21418611 AGAAGAACATCACCAAGACC 57 21418551 21418569 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470 3 1 2 81 2L 21158888 21159012 CAGTTCCGATCAGACATGC 58 21159057 21159075 GGACGGTGGTTCTATTTGC 58 NA InUTR Drosophila melanogaster 61 CG31673 FBgn0051673 FBtr0081422 3 1 1 92 2L 20830713 20830731 GTACAATTTCTGCCGCAGG 59 20830785 20830869 GAAGGATAACACAATTGGGCA 59 NA Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081369 2 1 2 122 2L 20399111 20399129 ACTTGGACTCAACTGCCTC 59 20387508 20387529 CTTCTGTACTAAAGCTGCTGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)37Cb FBgn0086444 FBtr0081163 1 1 1 119 2L 19126466 19126485 CGAGTACAAGAAGCAACTGC 59 19126306 19126385 ACGTATTCAGATCGCTCTCC 59 NA Drosophila melanogaster 61 CG10495 FBgn0032750 FBtr0081150 2 1 1 109 2L 19063374 19063392 TTATAACCATGCACCTGCC 58 19063465 19063544 ACTATAGCGCACCATTGGA 59 NA InUTR Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012,FBtr0110886 1 2 2 80 2L 17789253 17789352 GCAAGATGCCCATAATCTATCC 59 17789194 17789213 GTTCCTCCATCAGATAGGCC 59 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004,FBtr0300003,FBtr0300005 1 3 4 184 2L 16657881 16657899 ATTATCGGGATGAACGCAG 57 16658116 16658136 TGCATGATGGTGGTTATTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838 2 1 2 73 2L 16343298 16344437 CTGAAGAAGGAGACTTGCG 58 16343243 16343261 GAAATCGCTCTCCTTTGCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG16852 FBgn0028942 FBtr0080507 3 1 1 87 2L 13540992 13541013 CTCCCAAAGAGTGAATATGGAC 59 13541059 13541140 CCACGATTTGATCTTCTTGCT 59 NA Drosophila melanogaster 61 CG6108 FBgn0032498 FBtr0080459 2 1 1 60 2L 13280100 13280120 GCTACAGTCTATACATGGGCT 59 13280137 13280160 CAGTTTCCTCCTCATTATCTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 3 3 3 82 2L 9957834 9957852 CGAGATTCTCAGGGAGCAG 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 lectin-29Ca FBgn0040098 FBtr0079715 3 1 1 60 2L 8393744 8393763 TGGGTAGATATCAACAGCCG 59 8393703 8393725 TTCCGGATAGTGTAGAAATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0079620,FBtr0273381,FBtr0079621 3 4 4 92 2L 8252658 8252677 GACTCCAACTGTTAGGATCG 57 8252524 8252603 ACTTTGCTGCCTATCAAGG 57 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567,FBtr0079574 1 9 9 82 2L 8107165 8107248 GGACCTTTGCCAATGTAACG 59 8107293 8107311 AATGGCGTTAGGAACACCA 59 NA Drosophila melanogaster 61 CG11236 FBgn0031860 FBtr0079339 2 1 1 80 2L 6803869 6803949 GGCAACTATATTATACCCAACACC 59 6803985 6804006 GCAGACTTTAGTGTTGTAGTCC 59 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079377,FBtr0079376 1 2 3 106 2L 6802647 6802718 GACCAAATAGACGCTCGAC 58 6802496 6802514 AAGTGGTGTACATGATGCC 57 NA InUTR Drosophila melanogaster 61 slp2 FBgn0004567 FBtr0077500 3 1 1 60 2L 3838117 3838138 AATTTCTTACCTATCCTCCGAC 58 3838156 3838177 TTATAACGCTGATACATGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4271 FBgn0031409 FBtr0077756 2 1 1 60 2L 2285200 2285220 GATCTTATTTGCACGAAGCTC 58 2285238 2285260 GAAGTCAAACTTTGCCTCTACTC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34174 FBgn0085203 FBtr0112365 3 1 1 98 2L 2214876 2215023 AAGTTGCCGGTAACATTGC 59 2215084 2215103 GATGGACATAGGAGTCCACG 59 NA Drosophila melanogaster 61 Gr22e FBgn0045497 FBtr0077888 1 1 1 85 2L 1785007 1785025 GGGAGACAAACTTCCACCA 60 1785072 1785147 GCAAAGTCCGTGATACTTCTC 59 NA Drosophila melanogaster 61 CG17648 FBgn0031364 FBtr0077887 2 1 1 61 2L 1752652 1752670 TAAGCAGGAGTACGCTCTG 58 1752695 1752713 GGGTCATGATGTCCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33922 FBgn0053922 FBtr0091926 2 1 1 134 2L 1343754 1343772 GTAACCGTAGATGGCTGCA 59 1343578 1343661 CTTATCCAGAATGATATCGTGGTC 59 NA Drosophila melanogaster 61 Nnf1b FBgn0051658 FBtr0078008 1 1 1 81 2L 810750 810824 GGATTTAAACTCCTCAGATCTTGAG 59 810863 810881 TATTTGCTCGGTGTCCAGG 60 NA Drosophila melanogaster 61 RpI135 FBgn0003278 FBtr0078054 1 1 1 80 2L 404462 404542 AAACTCAGCAGGCATTTGG 59 404586 404604 GTTATCCAGTCCCACGGTC 60 NA Drosophila melanogaster 61 Pi3K21B FBgn0020622 FBtr0078132 2 1 1 103 2L 299905 302030 GACAAGTACATTGAGCGCC 59 302095 302115 ACTGTCTCATAAAGTTGCTGC 59 NA Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 1 2 2 82 2L 253374 253457 CTTCCATCACATCATGAATATCCG 59 253315 253333 CTTGGAATTGCACGAGCTG 59 NA Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078120,FBtr0078119 3 2 2 123 2L 156339 156431 CCTTGAATCGGGAGTGAGG 59 156515 156536 CCCAGAAGAAAGCAATAACTCC 59 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 1 6 6 80 2L 14976 14997 AATTATGTGCCTTATGGACCTG 58 14859 14938 AATTACATCGTTGGATCTTCGC 59 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 1 4 4 85 2L 1085132 1085214 CCAACTCATCAATGGTGCC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 3 2 2 81 2L 1161974 1161992 CCCATCAATGGGATCTTCG 58 1161854 1161929 TGTACTTCTCCTCTTGCGT 58 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 2 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938561 1938580 TTGATCCATCCAAGTTGGCT 59 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830 3 1 2 93 2L 2152100 2152118 CAGAAGGCTATTGGGTCCA 59 2152259 2152671 AGCAAAGCCCATTTGATAGAG 58 NA Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 3 1 1 60 2L 2240341 2240359 AAGGAAACTGTACGCACTG 58 2240227 2240248 GTCGAATTCTGAGTTATCAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 3 4 4 81 2L 2738319 2738337 CACGGAATACATGCGACTG 59 2738380 2738464 CTTCAGGTAGGTAAGAGTCCA 58 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 1 4 4 80 2L 2792362 2792492 TCACCTTTAAGAGTTTGCCCT 59 2792302 2792320 TCGAGAAGCGATCGAAGTC 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290079 2 1 9 135 2L 3879754 3879774 CAGAAATTAGCCTACGCATCC 59 3879055 3879657 ATTAGCATTTGACGCTGGC 59 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 3 4 4 80 2L 4343685 4343764 CATTCTGACCTTTCCCACC 58 4343807 4343826 AAGTAGAAGGCCTTCAAGGA 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 4 5 112 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473872 4473890 CCTGTGGTTGCATGTAGAG 58 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 2 3 3 60 2L 5044640 5044660 CTCCTACAGCCACAAATATCC 58 5044681 5045832 GATGTCGTCAGCTTTCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 1 5 8 92 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 1 2 2 134 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018954 7018974 ACCGTATTTCAGATCTCCCAG 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079399 2 1 3 182 2L 7050976 7051377 GATGGAAGTTCTATGCGGC 58 7051523 7051541 AGATCGGTTTCCAGATCCG 59 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 2 2 2 95 2L 7388043 7388061 AATTCGGAAGAGCTACGCA 59 7386640 7387986 CCAAGTTTCCACCAATCTGTC 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079460 3 1 5 140 2L 7455749 7458040 GTCAATAAGGTGTTGAAGAACC 57 7455630 7455649 TATAATCTCCGCAGGATCCT 57 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 1 2 2 134 2L 7800620 7800639 CTATTGGAGATAGAGGCCCT 57 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331,FBtr0079492 3 3 3 80 2L 7806707 7806727 AGATAGTTCACTACACCTCCA 57 7806514 7806668 GGTAGATTATTGCATACGAACC 57 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 2 2 4 92 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245141 8245160 CGTAATCGTATAAGCCGGAG 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 1 6 6 80 2L 8261678 8261754 GCTGCATACCAAAGTTCCA 58 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 3 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 borr FBgn0032105 FBtr0079817,FBtr0079818 3 2 2 140 2L 9251869 9251952 GTGGCTCAAGTAATGCCAG 58 9251747 9251765 GTTAAGGGTGTCCTCGTCC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079914,FBtr0079915 2 3 6 135 2L 9807416 9807434 TATACAAATTCGTCGCCGT 57 9802427 9807317 AATTGTAACTCCCAGCGTC 57 NA Drosophila melanogaster 61 CG33301 FBgn0053301 FBtr0079935 3 1 1 72 2L 10050595 10050616 CCACACTTCAGGAATATAGGCT 59 10050708 10050726 GGCTTAAACATGTGAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 3 1 1 60 2L 10191241 10191259 GGAGTTGAGGAACGAATGC 58 10191145 10191166 CTGATTTCTTCACTATGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 1 3 4 90 2L 10248580 10248600 CGACAGAATGTCCTATTTGCT 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 3 5 5 81 2L 10296850 10296948 CGTTTCTAAAGCTAAGCTCGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994 3 1 2 99 2L 10341073 10341094 TGTGGCTCTAAGTAACTATCGT 58 10341154 10341234 CAACGAGCACTTATTGGCA 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 3 2 3 82 2L 10581366 10581437 TCTTCTTTCGCAAGCACAC 59 10581302 10581320 AACCGTTCCTTGAGTTGTG 58 NA Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 3 1 1 60 2L 10737745 10737764 CTTCGCATCTAATCTCACCC 58 10737895 10737913 TAGCTCTGTTTCAGCTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 3 8 10 80 2L 10806031 10806052 AGCTACAGAAGGATCAAATCCT 59 10805731 10805990 CCTGCACATATGTCTTCGG 58 NA Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 3 2 2 84 2L 10839579 10839597 GGCCACATGATTGAATGGT 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 1 3 5 80 2L 10990712 10990730 TGTGGACAATAGTCCGGAC 59 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 5 6 101 2L 11835159 11835177 CGAATATGTCGTTCACCGC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 2 1 8 83 2L 12477157 12498533 TTTCATCGGTGCATCTGGA 59 12458201 12458219 ATGAGATGCGACTTGACCA 59 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981 2 2 3 112 2L 13173937 13174452 GAAAGATGGCATGGCTGTC 59 13173843 13173861 AATATAGTTCGCCTCGGGC 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 1 3 9 80 2L 13274314 13274338 GTATCATACCGATAACTCTAGAGCA 59 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 2 1 1 98 2L 13436750 13436768 AACGCTGCTGGATCTATCC 59 13437958 13437976 GAGTTCTTGTTCAGACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301495 3 2 4 154 2L 14636153 14688477 GAATGCAATAGGGCATCGC 59 14611855 14611874 TCATCAACCGAGTACGTCAG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080777 3 1 5 180 2L 15730825 15731010 ATTGAAATGGACCCTGAACTC 58 15730665 15730683 GTGAGCTACGTATGCTGAG 57 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 2 3 16 80 2L 16779140 16779159 AGAAATGCACGAAGGTTCTG 58 16779199 16780559 GGAAGAACACCTTTGTGTTACC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 2 4 12 87 2L 17715906 17716688 GTTGTTATCCACGTGACCG 59 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 2 2 2 99 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699101 18699120 GTCATGGCTTGTGTTGACTC 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081208 2 1 3 191 2L 19437838 19440675 AATTCCCACTTGGAGTACCC 59 19437666 19437684 CTTCTAGAAGACGGGCCAG 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0302108,FBtr0302107 1 2 6 96 2L 19513107 19513126 CCAACTGAGATCCATGTACC 57 19512970 19513048 GACAGGATCGGCTATAGCT 58 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0302108,FBtr0302107 2 2 6 96 2L 19513106 19513126 CCAACTGAGATCCATGTACCT 59 19512970 19513048 GACAGGATCGGCTATAGCT 58 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0081304 2 1 2 105 2L 19970593 19970611 CCACACTCAGTGTCAAGGT 59 19970227 19970524 TTGTAGTTGGTGACCTGGG 59 NA Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 1 2 2 80 2L 20432659 20432677 GGTCACCGAGGAGATACTC 58 20432718 20441066 GTGTGAAGAATTTGCATGTGAC 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 2 5 5 90 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184210 21184286 CACGATGAACCAACTTTAACTC 58 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081510 1 1 4 82 2L 21295437 21295457 CAGGAATGATGTACAGAAGGA 57 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 2 2 5 98 2L 21618103 21618506 TCAATAGCAATGCCACCCT 59 21618023 21618041 AACTCTCCGGAGTAACCAC 58 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 2 2 5 119 2L 21670616 21670637 TGAACTTACACCCGTTAAACAG 59 21670465 21670537 ACTATTAACGATCGCACCGT 59 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 2 3 3 80 2L 21680173 21680768 GCTAATGAACCGATTGTGGG 59 21680112 21680131 TTGTTGTCAGCCTCTTTCTG 58 NA Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999 3 1 2 81 2L 21775434 21795253 ATCCACAGATAACCATGAACG 58 21775373 21775393 GAGAGTCCAAGTATAGTTGCG 58 NA InUTR Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 1 3 4 97 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 2 2 2 80 2L 16840563 16841350 TAGTAACCTAAGCCAGATGACG 59 16841391 16841409 CCCATCAAAGTGCTCATCC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 2 3 3 80 2R 1195091 1195109 AATCCGAATTCAACAGGCA 57 1195152 1203787 CAACTCGAGTAAACCGACTG 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063 3 3 4 100 2R 1327170 1327188 CAACAACTGGCTATCCTGC 58 1327250 1328125 GGATTCATAACGACTCCTTGC 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 3 1 1 164 2R 2536950 2536968 TACCCAATCCCTCTAACGG 58 2539505 2539524 CTCTGATGTACTGACCACAC 57 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086136 3 1 7 153 2R 2618988 2619072 CCCGATTATGTATGATGGTAATCTC 59 2616493 2616511 TGGTTTGTAATCGTTGGGC 58 NA Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 1 2 2 87 2R 2699512 2699530 CATGAGAACTGTGAGCACG 59 2699578 2700296 CTATTATCGTTTGCACATTGGG 58 NA Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 3 2 2 78 2R 2811096 2811114 AGAAAGTCATCGTTACCGC 58 2811156 2811394 TAGATGCGCTCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111099 1 1 59 80 2R 3237333 3237353 AGATATCCACTAGTTTCGCCC 59 3236461 3237295 CTTCGATGAACTTGTACCATCTG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 2 3 59 83 2R 3244530 3244548 CTGGACAAGCCTATGGGTC 59 3236468 3244489 GAACTTGTACCATCTATAAACTGGC 60 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111103 3 1 59 97 2R 3236476 3242205 GGTACCATTCTTCAGATGGT 57 3236398 3236416 TGAGAGTACCAGAGACCTG 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111076 2 1 59 86 2R 3248144 3249230 CATCACAGAACCAGTTGGC 59 3248076 3248094 TGACTAGAGCCTTCGTCTC 58 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 1 4 4 83 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 3 3 4 190 2R 3872609 3872628 AAATGAGTCCAATGACACGG 58 3870502 3872393 ACATACTCGGCCTTAACCG 59 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 1 3 3 82 2R 3877500 3877518 ATACACGACGTGGTCTTCG 59 3877563 3877643 TCCTCGTCCCAAATCTTGAC 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 3 2 3 103 2R 4505872 4505891 TCTGGTGCGAATTGTATTCG 58 4505957 4506032 TATTGCGAACGTAACTGCG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 3 9 9 80 2R 4568219 4568302 CATGGACTACCGTGATATGAC 58 4568343 4568362 TCTTCCCAGTTGACTAGACG 58 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 1 2 3 90 2R 4607280 4607356 AGCGTTACCAGAACTTCGA 59 4607208 4607226 TTTCCCTTGATGGTTCCGT 59 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385 2 1 2 102 2R 4859004 4859022 ACGAAGAGGACGTTAACCC 59 4858604 4858939 GAAGTCGAGTGAATCTTCCG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 2 2 5 92 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354443 5354461 GTATTCCAACGATGACGCT 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 3 2 4 80 2R 5782125 5782146 CCTAAGCGATGAAAGTTGTCTG 59 5782186 5782260 ATTGGTCTGTTCTCTTCGGT 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366 2 2 4 198 2R 6097602 6119537 CCATGACAGCTCAAATTGAG 57 6097423 6097444 CTACAATATTGACATCGGTTGC 58 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 3 4 4 80 2R 6097433 6097452 TGTTAATCGCAACCGATGTC 59 6097101 6097391 CCGAACTTTACAGCATCACG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 3 4 17 107 2R 6181259 6181376 TGAGATCGGAGGTCAAGGA 59 6181662 6181681 GACACTTGTAGCGAATCACG 59 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290090 1 1 2 85 2R 6221196 6221214 GTATCCGCAATCGTATCCG 58 6219864 6221149 TTTCGCTAGGCACAAATAGTG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089353 3 1 26 160 2R 6419732 6419750 CATGACAATGGAGGAGCTG 58 6405693 6419549 AGGTTAGTACGAAATCTTGGG 57 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104 1 1 3 168 2R 7107862 7107987 GACGAGGTATTCAAAGCTCTG 58 7108116 7108441 CAACGATGCTGATAGTGTCC 58 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0088196 1 2 3 118 2R 7117000 7117018 CCAGAAGGACTTCTACCCG 59 7116523 7116918 TACTCTGTGCTCCTGTCAG 58 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 2 4 4 272 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394164 TTGAACTCGTGCTTCAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 3 4 4 103 2R 8229051 8229069 AGAGTGTTCCACCGATCAC 59 8228908 8228926 TGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087889,FBtr0087890,FBtr0087888 1 4 4 80 2R 8469433 8469802 AATTTACAGAACGGAGGACGA 59 8469373 8469391 TTCTCCAGCACTCGAATCG 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 1 2 2 86 2R 9043366 9043590 ATATGCTCAGGTTCTCCGT 58 9043298 9043316 AATCGATGGAGTTACGCTG 57 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 1 2 3 80 2R 9406088 9406109 ACTCTGCTTTATGTATGCTCCA 59 9405631 9406052 CCATAGATCAAAGACTTCTTCTCG 59 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087680,FBtr0087679 2 2 2 103 2R 9459460 9459542 CCAAGGTGATTGGTGATGC 59 9459375 9459396 GTTCCTAATGCGATTATCAGCC 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 3 4 4 144 2R 9717363 9718066 CATACAAGTGACCACTGCC 58 9718171 9718192 CTTGTATTTGTCCTTCAGATGC 57 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 3 3 15 81 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 1 10 15 149 2R 9752989 9753574 ACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 1 4 4 83 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 3 4 4 84 2R 10126046 10126143 GGTTCACAGGGATCTAAAGC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 3 2 2 95 2R 10720450 10720684 ATCGGCTAATGCTCTTCTG 57 10720743 10720761 TGCTGATCACATCCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 1 3 5 122 2R 10793452 10797740 TTGATGTGGCAGATTCCTG 57 10793348 10793366 TTTCATATTGGACCTCCGC 57 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 3 2 6 81 2R 10834799 10835160 TGGATTGGGAATTGATAGCTC 57 10834738 10834757 CTTGTCACATAGGGATCTCC 57 NA Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 1 1 1 116 2R 10840592 10840610 CCAGCTGGATAGTCCACAG 59 10839976 10839994 CTACTGTGCATCGATACGC 58 NA DesignNoJunction Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 3 5 5 81 2R 11211644 11211716 TGCCTGATGCAATGAAACC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 3 4 4 80 2R 11344302 11350806 GTTGATATCGAGGAAGAAACGTC 59 11350846 11350864 CTTGAGGAGCATCAGTGGT 59 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 1 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 3 2 2 99 2R 11900046 11900064 TAGTGCGTTACCTCTTGGA 58 11900185 11900203 GGTTTCAAGAAGGCAGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089589 2 1 5 141 2R 12020008 12020026 GTTCCTTCATGCTCTCCAC 58 12020131 12023540 CACCACATATCGTCCTGGA 58 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 3 2 5 117 2R 12216146 12216166 CCAACACATAGATCGTCTCCA 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 1 2 5 80 2R 12442693 12442712 CTGGCGATATTGTTGTGCTC 59 12442749 12443124 CCATCATTAGAGGTAGTTGTTTCTG 59 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 1 3 3 101 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471726 12471744 ATCCGAAAGATCCTGCTCC 59 NA Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 2 2 2 80 2R 12544692 12544783 CGGGATATTCCTATTGATGACTC 58 12544634 12544653 GAAGGACGACAAGATGTAGC 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 2 3 7 98 2R 13715432 13715450 GTCTAACGGTGGATTTGCC 58 13715508 13715851 CCGTATAATCAAAGGACTGTTGG 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092 3 1 2 162 2R 13984490 13984556 AACGTAAGACCCATGCCTC 59 13984679 13984700 TGATTGTAATCCATTGTGGGTG 59 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0099994 3 1 2 84 2R 14073200 14073222 GAGTGCTACGATGTCTATAAGGT 59 14072972 14073156 GCTTGTTCCCGTTCTTCAC 59 NA Drosophila melanogaster 61 CG5189 FBgn0034350 FBtr0299805,FBtr0086694 2 2 2 67 2R 14334290 14334308 TCTATTGGCCTACTCCGGT 59 14334339 14334357 ATATGTTGCTGGCTATGGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633 2 1 2 171 2R 14697677 14698838 TTGAGGATGAAGACTCCGG 58 14697458 14697480 GTCTTCTCCGACCAATTATACTC 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 1 10 10 80 2R 15298013 15298105 CAACAAGAGTCACTTTGTCC 57 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 3 7 10 81 2R 15296039 15296060 GAGGATAGAAGATCCACTCCAG 59 15295915 15296001 GTCCTTAATTAGTTGCTGGACAC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 1 2 19 85 2R 15359174 15359192 GTTTGAGGAGGACGAACTC 57 15359240 15360332 CTAGAGCTTCCGTCTTACCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 1 3 19 89 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 2 2 2 91 2R 16861134 16861425 CTTTATGGCCGCTTTACCG 59 16861061 16861080 GTGTCTCCGTAATCAGTCGA 59 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524 3 1 3 158 2R 16889783 16889801 ATCGATGACATGCTAGCTG 57 16889923 16890005 GCTGCTACTTAGGTGATGC 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 1 4 15 147 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 2 6 15 94 2R 16907281 16907299 TGAATGCCACGAAGAAGGA 59 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 3 2 2 86 2R 17038546 17038564 CAACGGGAATGCCAATCAC 59 17038419 17038496 TTACGTCGACCCTTAGTCG 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 1 2 8 124 2R 17186894 17191401 GGGAGTGAGAACATAAATCGC 59 17191487 17191505 GTAAGATGTCGGCTGTCCA 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 1 2 2 80 2R 17557087 17557108 GTGGAATCGATTTGGAGAAGAC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 2 2 2 80 2R 17709904 17709988 GCAATCGTGAGATCTTCCC 58 17709842 17709861 GATCCGATTCACAACTGGAG 58 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 2 2 2 80 2R 18075287 18075364 ATGAACATGAACAACATCTCCC 59 18075403 18075423 GTAGAAGTCGATACAGATGCG 58 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 1 3 3 80 2R 18113471 18113490 CGCTATACTACACGTTGGGA 59 18112904 18113430 ATGAAAGACTCAACAAAGCCG 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 2 3 4 81 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222370 18222450 CTTTAGACAGGGAGCTCTGAG 59 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0071839 1 1 2 82 2R 18363685 18363988 CCCGGATTGACAATATGGGA 59 18363622 18363640 GTTCCTTCCACAGGCTAGG 59 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071955 2 1 3 86 2R 18945976 18946583 CATTTGGCACAAGGTCTCC 59 18946633 18946651 CACTGAAGATAACGGCGGA 59 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301263 3 1 2 112 2R 19487479 19487501 CCAAATTATCTTCCTCCGTAAGG 59 19487330 19487410 GCTTGGATATGTTCTTGTTGGA 59 NA InUTR Drosophila melanogaster 61 TM4SF FBgn0020372 FBtr0100255,FBtr0072130 2 2 2 127 2R 19767765 19767784 AGTCAGCATGTGATACCCAC 59 19767874 19767968 GAAGATTCCCAGGCTCTGG 59 NA InUTR Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 1 1 3 109 2R 19858073 19858092 CAGTTTCCTGTACAGGAGTG 58 19858220 19858241 CGTGTTTGGTATTACTTGTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 2 4 4 60 2R 20420050 20420125 CGCCTCATCAACTTCATACG 59 20420147 20420166 CATCGTAACACTCGTTGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312,FBtr0072313 1 3 3 117 2R 20479589 20479609 TGCTGATCACCATTAAAGACG 58 20479687 20479764 ACATGATCTCTGTACTCGCT 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 2 5 5 81 2R 20770530 20770606 CTTCCTGCAAGTGATAACGA 58 20770649 20770668 AAAGTTCACTAGGATAGGCG 57 NA Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 1 2 2 147 2R 20856570 20856654 TAACACAAACTCGCGTCAG 58 20856441 20856459 CTTACGCTTTCCGAATCCG 59 NA Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072526 1 1 2 124 3L 212540 212618 GAAGAAATCATAAAGCAGCGC 58 212371 212454 ATGATGGGATTGCTGTCCA 59 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 3 3 5 112 3L 234494 234575 GCCAATGGATCTCAAACGG 59 234400 234421 GGTTATAGTAACGGCAGTTGTC 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299988 1 1 10 89 3L 291097 291319 AGGATATTGTCATCAGGAAGGT 58 291367 291387 AAAGTCTTCGCAGCATTACAC 59 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072572 3 1 2 80 3L 335162 335255 GAGAAGGACAAATTCGGCT 57 335100 335119 GAAGTACGAGATAAGCTCCG 57 NA Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 1 2 2 156 3L 360878 360896 ATCCCAGCATCAAGAAGAC 57 360681 360759 GCTTGGTCTAGCAAGTACTC 58 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 1 2 3 102 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1269141 1269159 GAGGTAGTAGCGCTTCTCC 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 RpL23A FBgn0026372 FBtr0072805 3 1 1 69 3L 1667401 1667419 AGAAGAAGGCCTATGTGCG 59 1667350 1667368 ATGATGCCGATCTTGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 1 2 2 80 3L 1834920 1834939 TCGTTATCCTTTCGTTGGCT 59 1834674 1834882 TTGGATGATCATAGTAATCCAGGG 60 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 3 2 4 109 3L 1881209 1881229 GCTATTTGCTCATCTTCACGG 59 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 1 1 1 60 3L 2475186 2475205 ATCCTTTCAATGTCATGCCA 57 2475082 2475100 CGAGATGCTGTATGTGGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 3 4 4 80 3L 2499615 2499700 CCACGATGAGGTTATGGCT 59 2499553 2499571 TGGATTTCCCGGATGAGTC 59 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 5 5 126 3L 2629234 2629252 GAGTGCAGTCCGTCTACTG 59 2611989 2629145 TTGAAACGCAAATCTAGCGT 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 1 6 15 80 3L 3083800 3085212 CACTTATATGGTCACGCCG 58 3085253 3085274 TGATATGGTGCATAGAAGTTGG 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 3 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 1 3 3 80 3L 3227695 3227782 TACTTCTCCAGGGAGAACC 57 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186,FBtr0073187 3 2 5 90 3L 3718983 3721548 GATTAGACTATGCAGGCAGC 58 3718912 3718930 TTCGCGTATCACAAATGGC 59 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0112845,FBtr0073152,FBtr0112844 3 4 4 142 3L 3829728 3829746 CTTCCGTTGCCACAATCTC 59 3829851 3831729 CATGTTGCCTCGTCTATTGC 59 NA Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 3 2 2 80 3L 4035082 4035168 ATCCTAAAGAGTATGCAGGCC 59 4035210 4035228 GCGACCAAGTAGGTAGACC 59 NA Nonspecific Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 2 3 3 92 3L 4247578 4247662 GCGGATTAGAGCAAACGAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 3 2 5 181 3L 5160148 5161352 AATGTAAAGGTTACGGCTTCG 59 5156995 5157014 TAGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 1 2 6 99 3L 5764462 5764727 CTGCGAACAGACAATAACGG 59 5764789 5764807 GATTGCTTGTCGGATGCTG 59 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 1 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077055 2 1 3 145 3L 6105287 6105477 TGCTCTTCGCAGATTCCTC 59 6109057 6109077 GGGTCCGAACATTTGATATGG 59 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149 1 1 2 91 3L 6173884 6173956 CAGGAAAGGTTTCACCACC 58 6173811 6173829 CATCGACATTGCAGGAGTG 59 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 3 1 1 62 3L 6659948 6659969 CCATAAGGAAACTGCTAGAACG 59 6659844 6659864 GTGATACGTTCCCAAATTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 SP1173 FBgn0035710 FBtr0076960,FBtr0076961,FBtr0076959,FBtr0076958 2 4 4 80 3L 6685395 6685482 CGTAATAACCGGTCTTACAGC 59 6685335 6685356 CGGTATTCCGAGAAGTTTAGAC 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 2 9 9 81 3L 7176524 7176543 AATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 1 5 5 130 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0301611 3 2 3 93 3L 7375356 7375374 ATGACCAGGGAGTTGATGC 59 7375428 7375501 AAATGATCGAGAATGCTTGGTG 59 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 2 3 3 80 3L 7759914 7759985 GTGGGCTACTTTCGTAACG 58 7759852 7759870 CGCAGGTTGTCCATTTGAG 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 1 3 3 82 3L 8181670 8182394 GACTGGATGGGTTACTCGT 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 3 3 3 93 3L 8180668 8180922 GAACATAACTTCCCTGGCC 58 8180979 8180997 CGTGTGGTAGATCTTGTCC 57 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 3 2 2 82 3L 8430189 8430209 GACGATGTGGAAGGTAATGTC 58 8430061 8430148 CCTAGATTACCTCTTTGGTTCG 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0301137,FBtr0301913 3 2 5 116 3L 8927399 8927512 TTTACCAGAAGGCTTGTAACC 58 8927213 8927231 CATCTTCCTGACGTTTGGC 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526 1 2 5 106 3L 9078843 9078861 GTTTATCCCAACGCGAGTG 59 9078927 9079007 GGTGTCGTGAATAATGTTAGTCG 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 1 4 4 80 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463531 9463673 CATCCTTCGTGTAGATTTCCG 59 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302709,FBtr0302711 2 2 3 151 3L 9568812 9574498 GACGCATAAGGTACGAGTG 58 9574672 9574690 ATTGAGCAACTCGATGTCC 57 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 1 2 2 89 3L 9723674 9723692 CATGGCCATCATTGCTGTC 59 9723837 9723855 TCCTTCCACTCAGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 2 2 2 96 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626525 10626544 GATAAGCACATTAGCCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 1 2 2 80 3L 11714553 11715112 CCTCTATTCCGGTATTTGGC 58 11715154 11715173 TTCAGGGTGTAGTAGGTTCC 58 NA Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 2 1 1 82 3L 12130342 12130361 TGGATACAGACGTTCATCCA 58 12130461 12130481 GGTGCAAATGTCTGATTAACG 58 NA DesignNoJunction Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075914 1 1 2 123 3L 12731689 12731708 GAGCCGTATTACTTGGTGTC 58 12731791 12731883 AACAATGCCCTCAAAGAATCTC 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290126 3 1 4 83 3L 13879286 13879306 AGAGAACGCGATCCTTATAGC 59 13877882 13879182 CAAATCATCAGCAGTTACCGG 59 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0075715 3 1 3 92 3L 14623289 14623634 CAGATCTGTATGAGGGCGG 59 14623215 14623235 TCTGACCAGAATCGTCATCTG 59 NA Drosophila melanogaster 61 dlp FBgn0041604 FBtr0075679 3 1 2 171 3L 14658168 14660374 AAACTACATGCGATGCGTC 59 14660508 14660586 ATTCAGTCGCACATTGAGGA 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075576 3 1 2 112 3L 15671626 15672917 GATCGAAGGACCAGATCTGAG 59 15672989 15673009 CGATTTCCCAAGATGGAACAC 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0112851 2 3 7 155 3L 16059929 16063240 CTTCAAGTTGGAGGACATAACC 59 16063355 16063437 GAAGCATTTAGTGCGATGGG 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 1 3 6 87 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 2 2 2 81 3L 16118876 16118962 CAGTTACTGGATAAAGAAATCCTGG 59 16118999 16119019 AACGAGCAATGCGTATAAAGG 59 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 2 2 2 80 3L 16392306 16392326 TAAAGGTCGAAATTCCGAGGA 59 16392177 16392264 AGGAGATCAGCGAGTTCTG 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 3 10 12 135 3L 16914143 16914290 TGCAATAAGGTCATCACCTC 57 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 3 7 12 124 3L 16905419 16906331 TCGACTCCAAGGATCTGTC 58 16906417 16906437 TCCACAGTAGATCTTATCCGC 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 2 3 3 80 3L 17035132 17035213 GGAACAAGCTCTGCTAAAGC 59 17035071 17035089 GGATGTTGCATGTAGTGGC 59 NA Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 2 2 2 61 3L 17423153 17423229 TGAATCCAAGACGTCATGAC 58 17423111 17423129 TAGAGCATCCTCTCCAGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 3 2 2 85 3L 17847363 17847451 AATACGCAATTGGCTCTGC 59 17847296 17847314 CAGGAAACTGCTCATCGGA 59 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566 3 1 3 83 3L 18608885 18608906 AGAATTTCCACGTACTAATGGG 58 18594546 18608843 GCACTCCAATTTCTAATGCTG 58 NA Nonspecific Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990 3 1 2 192 3L 19254747 19254824 CTGAGATTTCAATCCGGATGC 59 19254978 19254996 GATGGTGAGGGACTTCAGG 59 NA InUTR Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 3 6 6 145 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684741 19684911 GGATCCTCATCGACAGAGC 59 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 3 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 1 5 5 80 3L 19795361 19795441 GGCATGTATTTGTGGTACGA 58 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 3 2 3 112 3L 19903143 19903164 GAGAATGACGATAATTTCCAGG 57 19881562 19881642 TCGTCTTCGTCGTTATTCG 57 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 3 2 4 80 3L 20769141 20769282 CAGGATCTTTAAGGAATTGGGA 57 20769323 20769341 AACATGTTCTTCACGGCTG 58 NA Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 3 2 2 92 3L 21504342 21504419 CCTGATATGGATCGAAGCTG 58 21504474 21504492 AGAAATCCGACGAACAGGA 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 3 5 5 119 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776610 22776628 AATACGCTCACGTTGTTGG 58 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0100184,FBtr0078581 1 3 3 105 3L 22791956 22791974 GTACAAGTGTGGTCAGTGC 58 22791546 22791564 GTTGGGCATAGGACAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 1 2 3 112 3L 23734176 23739299 ATTGGACAGGGATCCTACG 58 23739375 23739393 ATAAGACCAGCTTGACGCA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA InUTR Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 1 3 5 122 3R 454061 455858 CTAATGGACAGACTGGCCA 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 1 4 4 80 3R 534706 534724 ATCGAGGATAAGATCCGGG 58 534768 534896 TTTCAGTTCCTCTTGCGAG 57 NA Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 1 2 2 85 3R 640425 640445 ACAGGAGTTGTATGCAATGGA 59 640492 641023 GATACAGACACATGCCGGT 59 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299709 2 1 3 80 3R 1008595 1011098 TACGAAAGATATCGAGCGTCC 59 1008535 1008555 CAGGAACATGGTTAGCTTGTG 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078780 2 1 3 129 3R 1083829 1092478 CATGGGATCAGGAAGTGAG 57 1092571 1092589 CTCGTTGAGGATCTTCAGG 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 2 2 2 132 3R 1183002 1183091 GAAGCTTCCGAACTGATCC 58 1182888 1182907 TTTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 3 2 2 134 3R 1183002 1183093 TAGAAGCTTCCGAACTGATCC 59 1182888 1182907 TTTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0089685,FBtr0089686 2 2 4 83 3R 1402908 1402926 ATCTACGCCATCACCAGTC 59 1402972 1403324 CAAATCGTCATAAGCCAGGG 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 1 3 12 91 3R 1586674 1587376 TTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 3 4 4 134 3R 1643901 1643980 GTCAACATGGACACAACGA 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 3 2 2 80 3R 2467275 2467352 AAGTTATGCTTGGAAACTGTCC 59 2467390 2467411 CAGATGCTTTCTGTGTAATCCT 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0113199 2 1 9 110 3R 2921511 2922022 CATCATCAGTCGCACAGTG 59 2921419 2921437 ACTGGTACTGCTATGACGG 58 NA Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 1 1 1 71 3R 3244777 3244795 CTTATGGAGGCTGCTACCC 59 3245124 3245142 ACAATTGGCTTCATCGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 1 3 4 88 3R 3586988 3587741 CACAAGGAAGTTGTAGGAATCC 59 3587790 3587808 CTGCTGAATCACGGAAAGC 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 2 5 5 94 3R 3697632 3697746 GTCAATTTGTTGGAGCGAC 57 3697556 3697577 CGATCCTATAATAAACTCGTGC 57 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 1 3 3 82 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723621 3723639 TACTGGGCTTCGATCATGG 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 3 3 3 111 3R 4184770 4184788 AGTGTACCACGGCTATCAC 59 4184860 4184937 CAGTTCGTTCATATCGTTAGCA 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 3 3 3 111 3R 4184770 4184788 AGTGTACCACGGCTATCAC 59 4184860 4184937 CAGTTCGTTCATATCGTTAGCA 59 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 2 2 3 90 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542284 4542629 ATACCTGCTGGACTCTTCC 58 NA InUTR Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 2 3 3 111 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081993 2 1 5 147 3R 5044473 5051951 CAGGAAATGATTACCACATCCA 58 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 1 2 4 109 3R 5180479 5180498 TGGAACGTGAATCTAACCCA 59 5180568 5180658 TCTAAGCGAGTCCTTATAGCA 58 NA Drosophila melanogaster 61 CG42511 FBgn0260237 FBtr0300646 3 1 1 60 3R 5232744 5232763 CCTGGGTCTCATCCATATGG 59 5232845 5232864 GTACACCGTCTCCATAATGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 1 2 3 89 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367655 5367673 TATTCCCGTTGTTGTAGCC 57 NA Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 3 1 1 77 3R 5380878 5380897 AACTGCTGTCCAAGAAACTG 58 5380759 5380780 GGCACTCATAGAGACAATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 2 1 1 60 3R 5640070 5640090 TCCAGATCCTTTACAATGGTC 57 5640176 5640195 TTCAGGACAAACAGGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 2 2 2 80 3R 6030866 6030884 CCTTCGCAAATCGGATACC 58 6030697 6030822 TCGGATGTAGCCTTGTAGG 58 NA Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 1 1 1 69 3R 6133027 6133045 GTTTCCTACCAAAGGCGTG 59 6133233 6133251 TCCGTTTGGAGTAGTAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 3 3 5 86 3R 7048443 7049127 CAAGAACTGGTACAAGAGCA 57 7049176 7049194 TTCTCGATGCTCTTCTTGC 58 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 2 3 3 125 3R 7504586 7504676 AGAACACTCCCATGCTTACC 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 2 3 3 100 3R 7792837 7792917 GATGCAATCCCTGAATGCC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 1 3 15 188 3R 7815238 7818474 TTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 2 3 15 189 3R 7815238 7818476 CATTCTACGGCGACTTTATGC 59 7815069 7815087 TGAGATGAGTGGAGTTGCG 59 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 1 2 2 98 3R 7834939 7835019 ATGATGAGATCTCGCGTGG 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 3 2 3 80 3R 8228195 8228270 CATTGGAAGTTGTGACCACC 59 8228313 8228331 CTGCTGAACTTTCGATCCG 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114499,FBtr0113228,FBtr0114500 3 3 6 62 3R 8522001 8522021 AGTCTGTCCATAGTCATGCAG 59 8522469 8522487 GTTGAGACTCCCGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 1 2 2 80 3R 8681484 8681563 GAAACCTGGATGGAAAGATAACC 59 8681426 8681447 ACATATCGTTGTCAATTGAGGC 59 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0082730 1 1 3 70 3R 8787195 8787213 AATACGCAACCATCTCGCT 59 8786018 8786036 TAAACTTTACGTCCGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 2 3 3 83 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610094 9610113 TGGATCATCGATCTGGACAC 59 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373 3 1 5 86 3R 9892797 9892817 CAGATTTACGAGTGGATGGTC 58 9892865 9904973 TTGCAAATCCTTCCATCCG 58 NA DesignRelaxed Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082885 2 1 5 149 3R 9905366 9905964 TATCAACTGCGATGATGGC 58 9906077 9906095 GTGTTCTGGTAGTCAACGG 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 2 2 10 96 3R 11001975 11001993 TACTTGAGGGACAAGCCAC 59 11001577 11001918 CTCTTATAGCCTTGTTGAGCTC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 1 2 2 60 3R 11093697 11093716 AGATGTACGAATGGTTGCTG 58 11093656 11093674 TATTGCCCTGGAACATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 2 2 2 60 3R 11093388 11093406 ATAATTCCAAAGGCAGCCC 58 11093346 11093364 AAAGCTGGACAAGTGAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112668 3 1 3 106 3R 11192307 11192393 CCATAAACGTTGAGCAACTG 57 11192220 11192238 CTCTGTGTTGCTCTCAGTG 58 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240 3 1 2 153 3R 11250971 11259853 GACCAGATATTGTTGGGAGG 57 11250778 11250796 GATCTTCGACAGTGGAAGC 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 1 2 8 88 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782597 AAATGCCAGAGCATCTTCG 58 NA Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 2 2 2 107 3R 12030246 12030624 CAACTACAAATATGAGAACGGC 57 12030160 12030180 CCCTTCTTCAAGTATTCCAGC 58 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 3 3 3 110 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636025 12636043 CTGGAAGCGAGTGTAGGTC 59 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083384 1 1 5 134 3R 12758196 12758214 CTCCTCGAATCTCCAGCAG 59 12757323 12758104 GACATATTGATGTCTTCCTTCTGAG 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 2 6 6 159 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500725 13500806 TGTGTTTGTCGTCTTGGTG 58 NA Drosophila melanogaster 61 htl FBgn0010389 FBtr0083549 1 1 3 74 3R 13874867 13874888 TCCCATCGTTAAGTAAACTGAC 58 13874274 13874292 GATGTGACTGCTGCAACAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615 1 1 3 151 3R 13956242 13956827 GAAGAATCAAGCAACGCGA 59 13956942 13956960 AAGCTATTTGAGGGCGGAG 59 NA Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 3 1 1 84 3R 14046384 14046402 AATCGACTGTCCGGATGTG 59 14046513 14046531 AAAGTAGTCGCTTTGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 2 1 1 209 3R 14179561 14179579 GGAGAGGGTCAAAGACCTG 59 14179313 14179331 ATATAGTGATGCGGACGCT 58 NA DesignNoJunction Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 2 5 6 80 3R 14229547 14229625 GATGAGTTCCTCATTGCCG 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 2 1 1 82 3R 14804366 14804387 GGTAATCTCATCAAGAGCATGG 59 14804230 14804248 TCATCGGAAATGGTGACCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 3 2 2 120 3R 15279980 15282853 CTAATGAGATCGGACCTGGA 58 15282936 15282954 AGAAGAACTTCACATCGCC 57 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110919 1 1 8 81 3R 15419812 15420234 ACTTGAATGAGAACTCAAGTGG 58 15420276 15420294 GAGTCCTCCAGATCATCGT 58 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 1 2 3 93 3R 15464141 15464633 CCATGAAGGAGATTCCAGGA 58 15464067 15464085 TTGCGCAGAAAGAATTGGA 58 NA Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123 1 1 2 80 3R 15621985 15622003 GAGGACTCAAGTTCCGAGG 59 15621225 15621941 GGACAACAGTCCGAAATCG 59 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 2 2 2 80 3R 15682733 15682752 GTCTCTGATGAGGCTTACCA 58 15682615 15682692 AAGGGATTGGAATAGCTTCAC 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302671,FBtr0302673,FBtr0302667,FBtr0302672,FBtr0302669 3 5 8 145 3R 16146161 16147204 TTCAACGATCACGATTTGGA 58 16147312 16147330 ACATACGAGGTCTCCACAC 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 2 5 5 83 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396868 16396886 GTTGTCTATCTCCCGAGCC 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 2 4 4 127 3R 16450496 16450514 CATCGATAGCGTACCAGCA 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 2 3 3 107 3R 16526041 16526324 GTCTTCAAGGTTTGGATATTCG 57 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083958 3 1 8 122 3R 16598596 16617476 ATGGAACTGAAATGGCGGA 59 16617562 16617580 TGTCCAGACCGTATTCCAG 58 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 2 2 2 68 3R 16676607 16676625 GACTAGAGACCATCGAGGC 59 16676657 16676762 CCAGTTGGTTCTTGACTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718 1 1 3 80 3R 16685187 16685207 CTTCAATTCTACTGATCGCCA 58 16685069 16685147 CAACGATGGGTACCATTAGAG 58 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 2 2 2 80 3R 16732087 16732106 GTTTCGCCAACTGTCTATGG 59 16732149 16732231 GAGTGGAGTAAGCCTTGGG 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 3 2 5 106 3R 17350212 17350230 AGTATGCAGGCACAAATGC 59 17350360 17351258 CAAATAATAACGATTGGCGGAG 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 3 2 5 106 3R 17350212 17350230 AGTATGCAGGCACAAATGC 59 17350360 17351258 CAAATAATAACGATTGGCGGAG 58 NA Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 1 1 1 184 3R 17357748 17357767 CACATTGATGAAGGTGTGGA 58 17357357 17357379 CCAGACAATTATGGATTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 1 3 3 92 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380607 18380627 CAGAACAAACGCCAGATAGAC 59 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0302856 3 1 3 96 3R 18515731 18515812 CTCGATAATTCCATAGAGCCCA 59 18515656 18515674 CATCCTCGTGTCCATTGTG 58 NA Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 2 2 2 80 3R 18901407 18901427 ACAAGATGCGCAACTATAACG 59 18901115 18901367 ATGGATAGGCATTCAAGTTGC 59 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 2 4 4 81 3R 19554870 19555665 TGTGAAGAGAAGCCTGGAC 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 2 2 2 63 3R 19558364 19558384 GCTCTACCAGAATTTCCTGTC 58 19558268 19558287 AATCTGGATGAGGCCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 3 4 4 71 3R 19815429 19815507 TATTGGAGCAGACAACTGG 57 19815376 19815394 GTTGACGGGAACAAGTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 3 3 5 139 3R 19838947 19839031 AGAGATGGCAATAGACTGGT 58 19838827 19838846 TCGATGATCATGTCCATCGA 58 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 1 2 3 91 3R 19977631 19977649 CGGAATGGAGTAATAGCGC 58 19977482 19977579 TGTATTGATTCTCTGTTCCACG 58 NA InUTR Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 2 4 4 117 3R 20048095 20048116 TTCCTGAGAAAGTATCTAGCCG 59 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581 1 2 18 126 3R 20521078 20521096 CAAAGCGTGTCATGAGGAC 59 20525143 20527823 AGGATGGTGTTCATTTGCAC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0301581,FBtr0100637 2 4 18 110 3R 20508114 20512919 GGGCGAAGACATATTGTGG 58 20512993 20513011 AAAGACCACTTCGACATCG 57 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084709 2 1 2 120 3R 20691279 20691298 TTTATCCTGGCCTTGGTCAG 59 20691381 20691459 GGAATCTGGTGACCTCTGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 1 2 7 149 3R 21539672 21544127 CGGATTGGAATCAACTTGCA 59 21539357 21539375 ATCAAGGAGGAACACAGGC 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 1 2 5 145 3R 21711423 21711441 TGCTGCTGATAGTCTACGG 59 21711548 21711618 CGCTGTGAAATACAGATTTGG 58 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290138 3 1 5 83 3R 21746256 21746338 TTAGAATACGAACCTCACAGTG 58 21746381 21746400 AATTGTAAGTAGGGCTCCCA 58 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 2 2 2 107 3R 22186367 22186386 TATACCGCATCTCTGATGGA 57 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 1 2 10 80 3R 22423776 22423797 AGACCCAGGATGATAAAGAGTC 59 22423835 22424309 GCTTCTCAGCATTAATCATGGA 59 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134 1 1 2 80 3R 22796051 22796377 CTTCCGTTTCACATTGTGCA 59 22796420 22796438 AAGGCACAGGATCTTCTCC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0114372 1 1 12 95 3R 22892460 22892478 CCTGATCCAACCAGATCAG 57 22892166 22892339 CGATACTTGGTATCCGATGG 57 NA Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 3 1 1 84 3R 23410057 23410075 AAATCAGTCGGATGGATCG 57 23410381 23410399 CTTGATCAGGTCCAACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 3 3 3 125 3R 23512758 23512777 AATGACACCCAATTTGTCGA 58 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 1 1 1 69 3R 24109732 24109750 TAACAACTGCTAGTTGCGT 57 24109841 24109862 GGTATATTGTCAAACCTTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 1 2 4 85 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698013 24698249 TCAACTTCAACCTGCAGGT 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 3 7 13 121 3R 24726632 24726650 ACAAATACCGCTACAGGGA 58 24726735 24745222 CTTTGCTGTCTTAGCCTGC 59 NA Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 3 2 2 88 3R 24970282 24970363 CGACCTTCTAAAGAACTATCTGC 59 24970411 24970429 TGTCCTCTGATTCGTCCTG 58 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 3 3 3 87 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975352 24975370 CTTGAAGTTCTCGTCCAGC 58 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 1 3 3 80 3R 25073569 25073652 TCTTACCAAATGGATCTCGGT 59 25073509 25073527 AAATCGGGCTCATCAAAGC 58 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 2 3 5 84 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423187 25423895 GCGTTGGACTTTCACATGG 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 1 4 5 81 3R 25857057 25857154 CCATCTACAGATTCTTGCGC 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 3 2 4 163 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26274930 26275548 CGTCATTAAATGCAGATTCGG 58 NA Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 3 2 2 82 3R 26332230 26332251 ATTCAGTGGACTTATTCACTGC 58 26332293 26332365 CCATCCAGCGATGTATTGTG 59 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 1 1 1 70 3R 26517467 26517485 CCTACCTTCTGTCAGTCGG 59 26517608 26517626 TTAGGGCAGACGTGATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 1 4 4 60 3R 26750244 26750262 GAAGAGATCGCCATGTGGA 59 26750285 26754872 GATTCTTGAACCACACCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 3 3 6 80 3R 27554134 27554155 CTCGAAACGATCAAAGAACTCC 59 27554193 27558654 TTAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 2 3 3 80 4 87361 87480 TACGGACAAGTACAGGTCG 58 87299 87319 TACCCATCTACAGTCTTTGCT 58 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 3 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 1 4 6 106 4 640796 640895 CTCAACAGATATCCAGGTTAACAG 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089971 3 1 2 108 4 654387 654405 TATTGATGAATGGCCGCAG 58 654474 654595 AGCCGCTAATTGTGTAATACAG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 1 9 9 80 4 1068496 1068515 GGATATCTGTCTCCTGAGGT 57 1068342 1068456 GTAAAGAATAACTCCACATGCC 57 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 1 3 3 92 4 1150106 1150202 ACAACATTCGACTTGGAGAC 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 2 2 4 146 U 1183496 1184087 GACTTCGTGTTGTGGTACC 58 1184197 1184215 ATGTATAGTACTCCGCGGG 58 NA Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 2 3 3 98 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242175 242193 CTACTGATGTGGCATCTGG 57 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 3 2 4 93 X 516384 516491 ATATCAGGATTGCAGCTTCCA 59 516546 516564 TTGAGGAAAGTCTGCACGT 59 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 2 3 3 66 X 520388 520548 AAACAACACAAACAGCTTCC 57 520577 520595 CTTCAGCAGCTTCTTGGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 2 5 6 87 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640607 640627 TCAGTATGTGATAGCTGACCG 59 NA Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070167 2 1 3 178 X 829790 829808 CTTGGAGTCTCCCAGTGTG 59 830441 830459 CTGGATCACAAACTCGTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 2 2 2 110 X 1948464 1948546 AAACCCATGGAAAGAACCCT 59 1948617 1948637 AGGATGCATTTGAGGTATTGC 59 NA InUTR Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 2 2 2 80 X 2160700 2160866 GCAGTACAAGCAAGAAGGA 57 2160638 2160658 AGTCTTGTCTCTGACTTTGAC 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 3 3 3 124 X 2609204 2609222 CTTCCTTCACTCGTCCGAG 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070481 1 1 3 194 X 2608225 2608321 GAACAATAGTGGCGTACAGG 58 2608478 2608553 GAACCAGGACCTATGTCCC 59 NA Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 2 3 3 88 X 2679094 2679112 ACAAGATGACCTTGAAGCG 58 2678712 2679044 CAGGATTATCTGCAAATAGCG 57 NA Drosophila melanogaster 61 yin FBgn0015565 FBtr0070631 1 1 3 123 X 3759468 3761985 ATTCTCAAATTGCGCCACC 59 3759304 3759322 TTGTTGGTGAGGTACAGCA 59 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 2 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016107 TCTAGCTGTCGAGTAGTCG 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 2 4 4 82 X 4972206 4972224 CATTCATCATTCGACCGGA 57 4972051 4972161 GCGAAATAACACCTGTTTGC 58 NA Nonspecific Drosophila melanogaster 61 SK FBgn0029761 FBtr0301952 2 1 7 92 X 5292787 5293576 ACATTCTAGAAGTGTTCCCTC 57 5293626 5293648 GGTGTTCTACTAGATATAGGTGG 57 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 3 3 3 82 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309885 5309905 AAATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 1 3 3 80 X 6261186 6261399 CTTTATCAACGCCCTGCAC 59 6261440 6261461 ACCTTGTACACATAGCTTTCGA 59 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 2 3 3 81 X 6261186 6261399 CTTTATCAACGCCCTGCAC 59 6261441 6261462 CACCTTGTACACATAGCTTTCG 59 NA Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 3 2 2 90 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492628 6492717 GACCAAACATCGTGAAGCTC 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 1 2 2 141 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 3 4 21 82 X 6986733 6986757 CGTCCTACTATAACTTTAAGATGGC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071095,FBtr0071094 2 2 2 123 X 7828194 7828212 ATGTCACTGATCTGTCCGG 59 7828299 7828376 TTCTCAGCCACATCCTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 2 3 3 91 X 7991097 7991203 ATCGAGAGGATGATCCCAC 58 7991024 7991042 CGGATGGCTGAATATGTCG 58 NA Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 1 1 1 266 X 8377620 8377638 TGCTGCGAATAAAGTTGCG 59 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071351,FBtr0114594 3 3 5 94 X 8994611 8994631 CAAGGGCGAGATAAATTTCCT 58 8992438 8994557 TGTCCTGATCTAGATGGATGC 59 NA Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 3 2 2 60 X 9481077 9481096 GCCATACTCAATGACACCAC 59 9481119 9481137 TGCAGTTGTGATTCTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071366 2 1 2 190 X 9502314 9502760 GTCCAAGAATGAGCTAAAGCG 59 9502144 9502162 GTGAACGTTTCAGCTCCTG 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 3 3 3 80 X 9566938 9566956 TGTTTACACCTGCAACCAC 58 9566814 9566897 ATACACAGATCGAAGTCATCAC 58 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0071402,FBtr0302723 1 2 3 80 X 9575212 9575315 TGCAAATGACTCAACTCAACAG 59 9575153 9575173 GTTGCTGAGGATTGTTACCAC 59 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0112970 3 1 2 83 X 9873018 9873100 GATATCCACTTTATTTGGACCTGG 59 9872958 9872977 CCCAGAAGACCAGAGATCAG 59 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 2 3 3 87 X 9955305 9955323 CAATGTGAGCATACCGTGC 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 2 2 2 93 X 10644116 10644196 GTCAAGATCCAACTCAAGCC 59 10644042 10644060 ACTCCTCGTTGTAGATGGG 58 NA Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 2 2 3 170 X 10986856 10986874 CCATTTCCACCTGAGACAG 57 10987125 10987143 GGCGAAAGGTGTATTCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0073488 1 2 15 80 X 11277075 11277093 ATAATGTGAGTGCCCAAGC 58 11277137 11281814 TGCGCTGATTCAAGATCTC 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 3 4 10 85 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848300 11856056 GTTGATTGAGTTCGACCCG 59 NA Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 3 2 2 80 X 13114117 13114136 CAAGGAGGATCAATGGATGG 58 13113904 13114074 CAGACGATTACCTTTCCGC 58 NA Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 3 2 2 88 X 13304292 13304384 TCTGCTAAAGGTGATCTGGT 58 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 1 1 1 120 X 13450711 13450729 GATCCCATGGAGTCCTTGG 59 13450917 13450937 GATTCACATTAAGGCCATCGA 58 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0301923,FBtr0301922 3 2 10 105 X 13493483 13494113 GAAGAGTACACCTCCGAGG 58 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290302 1 1 4 83 X 13700624 13700642 TCGATGAGGTGCTCATCTC 59 13700687 13703323 TTGTTACAACCTTCTTGAGGG 58 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967,FBtr0110969,FBtr0110968 1 3 3 60 X 14969792 14969811 AAGTCCCAGGATGTCTATGG 58 14968378 14968398 TTAAAGCCCATTCGAAGACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 2 2 2 60 X 15360106 15360125 CTTCGGCAAACTATTCACAC 57 15360145 15360260 CGTCAGTTTGTTTATGTTTCCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 3 5 5 166 X 15688455 15688538 AGATCCACGTAACAAAGTTCC 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 3 5 9 135 X 15714505 15714523 GAGAACCAGGAAGCAAGTC 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 3 4 9 119 X 15714518 15714536 CAAGTCAGTTCGCACATCC 59 15717249 15717335 ATCATAGAAATCTTGGGACGTG 58 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 1 3 3 86 X 15744638 15744656 CACTGGGACTTCCATTAGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074107 1 1 6 81 X 15754276 15755032 CACTGCGTTATACCATCCC 58 15755074 15755095 CCCGTCTGATTTGTAATTAGGA 58 NA InUTR Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299536 1 1 3 80 X 15843026 15844396 GTGATAAAGCAGAAGCTGTCTG 59 15842967 15842986 GGATACCACATCCTCACTCG 59 NA Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 1 2 2 80 X 15875825 15875843 GAAGGAACCGCATTTGCTC 59 15875697 15875783 TCCGAGTAGCATATCTTCCAG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 3 6 9 188 X 16270359 16270691 GAACAGTGGTATCTGAATGGC 59 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 1 2 3 80 X 16323423 16324657 AAATCCCTAACAGTCTATCCAC 57 16324695 16324716 CTTCATCTGATAGTCGTCATCC 58 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 3 3 4 81 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022948 17023198 TCAATGACCTGATGACCCT 58 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477 2 1 2 80 X 17583330 17589478 AAACGAACTGGTCGAATTCG 59 17583269 17583290 ATAGCTTCTGTATCGCAATTGC 59 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 2 2 2 114 X 17595800 17596243 CATGAGTTCGCAATACTCGA 58 17595705 17595723 GATTAGCACCTTGATGCCT 57 NA InUTR Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 3 1 1 70 X 17744852 17744871 CCCTCATTGAAACGTACTCC 58 17744964 17744982 CGGTATCATTAGGCACGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300977 2 1 6 60 X 17794817 17794838 CTGTTCAACATCTATCGCAAGG 59 17794859 17798658 CTCGCTGAGTACGAATCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 2 8 8 83 X 17844789 17845234 TAACTGTCAGGTTCCTCGC 59 17844724 17844744 GAATGATGGCGATTATGTCGA 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 1 2 7 80 X 18004587 18004605 CAACGCGTATACAGTTTGG 57 18000953 18004544 GAGATCGTTGATCTCTTGGG 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 3 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 1 3 6 117 X 18302639 18302658 TCCTATGCCAGTTTAGGCAG 59 18301909 18302559 TCATCTCGCATTGGTAGGG 59 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598 1 1 3 83 X 18460583 18460601 CAGTACGCTTATCAGTGGC 58 18460645 18460737 AGTCATCATATTAAGGCTACCG 57 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0113316 3 1 3 94 X 19159260 19159279 CCTACATCTACAGCGAGGAC 59 19159336 19163302 ATTGTCGGTGGTAACCTCG 59 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 1 2 2 60 X 19565030 19565050 CATCAAGCAGATCTGCATGTC 59 19565154 19565175 GAAAGGCTTCTCGATAATCACG 59 NA DesignNoJunction Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 3 2 2 60 X 19565027 19565046 CAACATCAAGCAGATCTGCA 59 19565154 19565172 AGGCTTCTCGATAATCACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0074800 2 1 3 200 X 19766287 19766305 CTGTGATGTTGGCTCTCCA 59 19766467 19794658 TGATAGTAACCACTGGGATCG 59 NA Drosophila melanogaster 61 hydra FBgn0031128 FBtr0300487 3 1 3 90 X 20543395 20546174 TTAAAGACATCGCTCCGAC 57 20543323 20543343 CCTCGAATCCTGAATTCTTCC 58 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 3 4 4 94 X 20989788 20989900 ACCTAATAGAGATGGAGGATCAG 58 20989952 20989972 CTTCTCACAGAATCCCAAACC 59 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 2 2 4 116 X 20990664 20990688 GCTCTAATAATGATATCCTCCAAGC 59 20990877 20991013 CTTTCAGCTCCAGTTTGGTC 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0089679 2 2 5 194 X 21223906 21223925 AGCGGAAGTACAACTTTACC 58 21224082 21225130 ATCATGCATATGCTGCTGG 58 NA Drosophila melanogaster 61 snmRNA:430:CR33731 FBgn0053731 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Ah FBgn0011938 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Ab FBgn0011888 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:42A FBgn0011880 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30234 FBgn0050234 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30215 FBgn0050215 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-219 FBgn0067723 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31569 FBgn0051569 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31383 FBgn0051383 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-92b FBgn0067681 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G980 FBgn0086042 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1192a FBgn0083001 FBtr0113566 1 1 1 60 X 17038542 17038560 GCTTGTAGACCAGATCGAG 57 17038500 17038518 CGAAGCTCAATTCTTGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300652 1 1 2 147 X 7792951 7795285 CAATATGAAGGCCGTTTGC 57 7792822 7792842 GATTCTTCTTGAGAACGACCA 58 NA Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111192 1 1 2 60 X 22415905 22415923 AAAGTCCATGCCTAGGGAG 58 22416291 22416309 TTTGGTCAGAAACTCCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14618 FBgn0031189 FBtr0077351 3 1 1 128 X 21876262 21876280 ACAATCACTTCAAGGGCCT 59 21876371 21876481 GCTCAAACACATGGTAGGTG 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 CG1678 FBgn0031176 FBtr0077219 1 1 1 78 X 21273593 21273611 GAATACCTCAGGGACCTCC 58 21273533 21273551 GAAGAGTCTTCGGAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fliI FBgn0000709 FBtr0077192 1 1 1 81 X 21214282 21214538 TCAACCTTCTGCTACATACTCC 59 21214580 21214598 TGCCTATCCACACGTACAC 59 NA Drosophila melanogaster 61 CG33714 FBgn0064117 FBtr0091704,FBtr0091703 2 2 2 60 X 21189955 21189975 CGTTAGCTTCAACAGTTTGAC 58 21189915 21189933 CAGTATGTGCTTCTGCTCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx16 FBgn0031106 FBtr0077330 1 1 1 121 X 20264475 20264493 CTTCTAAAGCACTCGGTGC 58 20264310 20264392 GGCTTGATCTTAGACATGGTG 58 NA Drosophila melanogaster 61 CG34332 FBgn0085361 FBtr0112534 2 1 1 60 X 20035243 20035318 TACTTACACGGAGGAGATCCA 59 20035340 20035358 AATCAGCCTCTCCATGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Nep3 FBgn0031081 FBtr0070000 2 1 1 94 X 19859149 19859240 GGATATTCCTGCAATCAATGGA 58 19859295 19859313 AACTGGTTCATCTGCTCCA 59 NA Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074808,FBtr0074807 2 2 2 60 X 19675009 19675028 AGCAGTCACCCTATCATCAG 59 19674968 19674986 TACTCCTGCTTGATCAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074816 3 1 3 87 X 19635187 19638298 AAAGCAGCGACAAATCGTC 59 19635118 19635136 TTCTGGTTAGGGAACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MKP-4 FBgn0031044 FBtr0074741 1 1 1 80 X 19517737 19517820 CTTGTGCACTGCTACTTCG 59 19517864 19517882 GAAGTCCAGATTGTGTCGC 58 NA Drosophila melanogaster 61 CG14205 FBgn0031034 FBtr0074730 2 1 1 80 X 19488259 19488279 GACTACTCCAAATGCAAGGAC 59 19488320 19488406 GCCTAGGCAGATTTCATCAG 58 NA Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 1 2 2 96 X 19171596 19171693 TACTTGCCCAAGGAAAGGT 58 19171518 19171538 GAATAAACCCAACAATGGGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14195 FBgn0030998 FBtr0074692 1 1 1 143 X 19104364 19104880 TCTTTGCAGGTATCGGCTC 59 19104239 19104257 ACACGAACGAGAGGAACAG 59 NA Drosophila melanogaster 61 inx5 FBgn0030989 FBtr0074698 2 1 1 92 X 19063908 19063926 TACTTCACCACCGACTACG 58 19063541 19063852 GTTCACCACACTGATGAGG 58 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 2 2 2 88 X 19020449 19020467 TGCTCTACCCGTATTCACC 58 19020312 19020400 CATGTATGACTCGTTCTTCTGG 59 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 1 2 4 231 X 18691376 18691394 CTAAACCAACGTTAGCCGC 59 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 phm FBgn0004959 FBtr0074603 3 1 1 69 X 18580369 18580473 TGGATTTGGCATCATCTGC 58 18580505 18580524 TAGCCAATCGATAGTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6540 FBgn0030943 FBtr0074601 2 1 1 294 X 18542478 18542556 ATATAAGTTTCGCCACCTCG 57 18542813 18542831 TCATTCGTGTGATAGCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616,FBtr0301545 2 2 2 99 X 18534440 18541237 ACTGTAGTGTAACGGTGCA 59 18534359 18534377 TACTTCTCCTTGCCCAGAG 58 NA Drosophila melanogaster 61 betaCop FBgn0008635 FBtr0074576 2 1 1 81 X 18275998 18276086 AACATGTACGCCAAGTCCA 59 18275935 18275953 TCGAATCGGGATCATCGAC 59 NA Drosophila melanogaster 61 CG32554 FBgn0052554 FBtr0074467 2 1 1 60 X 17746311 17746329 TCTGGATGTACCCAATGGC 59 17746269 17746287 CACGAGCTTGACTTTGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12986 FBgn0030868 FBtr0074474 1 1 1 130 X 17713428 17713447 TACATGTGCCACGACTACTG 59 17713317 17713335 AATATCCTCAGGCGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8289 FBgn0030854 FBtr0074484 1 1 1 148 X 17529490 17529508 CAAGTCCGATCAAGAAGCG 59 17528996 17529378 TTTAGCTGCAACCTTCTGG 58 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 1 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 1 2 2 80 X 16554496 16554581 CAGTTTCAAGCACAAGATGGA 59 16554623 16554641 CCCATGGAAGCGTATAGCT 59 NA Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074293 3 1 2 133 X 16480554 16480572 AAAGCGCAATGTCAATGTC 57 16462287 16462305 CACTGCTTGCTATTCCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3560 FBgn0030733 FBtr0074216 1 1 1 93 X 16180634 16180715 TCAACCAATACGGTCTGCA 59 16180772 16180790 TCATCGTACAGCTTCCTGG 59 NA Nonspecific Drosophila melanogaster 61 CG8931 FBgn0030717 FBtr0074134 2 1 1 99 X 15878563 15878638 GCTCAAATGCATAAGTATCGG 57 15878699 15878717 GAATAGACCGGGTTTCTCG 57 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301233,FBtr0301232 2 2 2 80 X 15818122 15818142 TTCGCTACAGAATTCACTAGC 58 15818181 15818260 TACGATGGATCGTTATATGTGG 57 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 1 5 5 80 X 15749869 15749890 CTATAATCGCGTTGGAATGGAG 59 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 2 2 2 60 X 15360106 15360125 CTTCGGCAAACTATTCACAC 57 15360145 15360260 CGTCAGTTTGTTTATGTTTCCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 2 8 8 130 X 14825229 14825248 AAGCAGATCGAGATTGAGTC 57 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991,FBtr0073990 1 2 4 96 X 14722053 14723176 TTCAGCAGATCTTCAGAGCC 59 14721976 14721998 CTATAATGGCACCATTCTCATCC 59 NA Drosophila melanogaster 61 Ste:CG33238 FBgn0053238 FBtr0300087 2 1 1 110 X 13952401 13952419 TCTGATACACAGCTGGACG 59 13952249 13952327 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0301920,FBtr0301919,FBtr0301921 1 3 10 112 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488919 13488940 TCCGCATAGACCGTATTATAGC 59 NA Drosophila melanogaster 61 CG34324 FBgn0085353 FBtr0112526 1 1 1 274 X 13351528 13351642 GAGAGTTTACCACTTGCTGC 59 13351273 13351291 TAGTAATGCACGGAGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 2 2 2 81 X 13314265 13314283 GTAAGCTACCAATGCCACC 58 13314328 13314410 CTCTGGGAACTCTTGACCT 58 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 3 1 1 71 X 12600717 12600736 AATATCTTTGCCGTACTGCT 57 12600770 12600923 AAATGAGCGGCAGATTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2543 FBgn0030407 FBtr0073655 1 1 1 80 X 12506741 12506759 ATGTCTCGGGCAATATCCA 58 12506803 12507158 ACTGCTTAATGGCCAACTC 58 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 1 3 3 135 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466537 12466555 CTTCACCTTGACCTCCTCG 59 NA Drosophila melanogaster 61 m FBgn0002577 FBtr0073555 3 1 1 80 X 11661069 11661091 CTGTTAGTGGAATTGTACCACTC 59 11661131 11661217 GCATATCGAATTCGCCTCG 59 NA Drosophila melanogaster 61 CG1837 FBgn0030329 FBtr0073551 3 1 1 60 X 11612792 11612871 AGTCATTGTCAGCGTTTGG 58 11612893 11612913 GCTCTTTAATCAGCTCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1703 FBgn0030321 FBtr0073520 2 1 1 152 X 11507285 11507375 ATCTCAGCCAAGGGTAACG 59 11507490 11507509 ATCGATATTGGGCGGTATGG 59 NA Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 2 1 2 131 X 11336740 11337617 ATACAAGGTCAAAGAAGCGC 59 11337711 11337729 GTTCATGCGTCTTTCCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tim8 FBgn0027359 FBtr0073482 2 1 1 91 X 11262583 11262601 GAACCTTTCCGGCAATGAC 59 11262655 11262752 CGTTGAACTCGTGTATCTGC 59 NA Drosophila melanogaster 61 Rpt3 FBgn0028686 FBtr0073436 2 1 1 60 X 11019529 11019605 TGCGTTACAAGAAACTGCA 58 11019629 11019647 TTGATGTACTCCTCCTGCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 1 2 10 80 X 10692592 10692666 CTCTACGAATAAGGGTGAACTC 58 10692533 10692553 CGTCCAATCAAATTGTTGTGG 58 NA Drosophila melanogaster 61 l(1)G0289 FBgn0028331 FBtr0071470 1 1 1 97 X 10252801 10252819 AACACCATCATCAAGCTGG 58 10252658 10252740 CACCATAGGCACGTAAACG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585,FBtr0071439,FBtr0112675 1 4 4 80 X 10121920 10121938 GAACTCCACCATATTGGCA 57 10121982 10122065 CGTATGAGCAGAGTCACTG 57 NA Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071392,FBtr0071391 2 2 2 80 X 9778565 9778583 GGATTGGTCCTGCTTATGG 58 9778627 9778645 CTTGAATTCGCTGTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ser7 FBgn0019929 FBtr0071387 1 1 1 80 X 9759421 9759503 CAATTTGGCAAAGCTATCATGC 59 9759542 9759562 GTCCTTCTTCTCGATACAGGT 59 NA Drosophila melanogaster 61 CG3004 FBgn0030142 FBtr0071368 1 1 1 80 X 9499847 9499866 GACCACACCATTAAGGTGTG 58 9499730 9499804 ATTCACTTGCGAGGTCTCC 59 NA Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071340 2 1 2 147 X 9090345 9090367 GTCGTCTCTACTTTCAAATAGGC 59 9090144 9090239 CATATGCTTCTTGGATGGCG 59 NA InUTR Drosophila melanogaster 61 CG7065 FBgn0030091 FBtr0071299 3 1 1 115 X 9038970 9040049 GACCTTCAAAGGTACCAACG 58 9040127 9040145 AAGCATTGGCCAATTTGGG 59 NA Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071267 2 1 2 126 X 8799407 8800149 TCGAACGGATCACCATGTC 59 8799299 8799318 TCCTCGTAGATCTTGCACAC 59 NA InUTR Drosophila melanogaster 61 oc FBgn0004102 FBtr0300106 3 1 1 83 X 8527989 8534406 AATCTAGAGTACAGGTGTGGT 58 8527926 8527944 TCAAGCTATTCGACTGCTG 57 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 2 6 6 116 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944208 7944226 CTCGAACTGCTATCACTCG 57 NA Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140 2 1 4 80 X 7787513 7787792 GATGCTATAAACCTATGGGCA 57 7787453 7787474 CAACAGTGGGAAAGAATATCAC 57 NA InUTR Drosophila melanogaster 61 Ir7e FBgn0259189 FBtr0299673 2 1 1 141 X 7774838 7774909 TTTGGAAATGTTGCGACGA 58 7774715 7774733 TTCATAGCTGGAGGCAAGG 59 NA Drosophila melanogaster 61 Atg5 FBgn0029943 FBtr0071065 1 1 1 80 X 7217284 7217386 TCCAATTGGTGTCCTATACGA 58 7217224 7217244 AACTTGGAGAAGTGAATGGTG 58 NA Drosophila melanogaster 61 CG1958 FBgn0029940 FBtr0071046 1 1 1 60 X 7161283 7161303 AATTCTGGACCATCACTTGAC 58 7161325 7161343 CCTTCCAACTGAGCTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112703 2 1 6 166 X 6435351 6437134 GCAGCAACAGTCATTCCTG 59 6446007 6446027 CTATAGAGGTTGCAAAGTCGC 59 NA InUTR Drosophila melanogaster 61 CG4119 FBgn0028474 FBtr0070799 2 1 1 86 X 5560755 5560773 CTCAAACGCATCCTGAACG 59 5560822 5561252 AATAGGTCCGTCAAATTCGC 58 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300464 2 1 3 61 X 5536965 5536983 CATCCGAATCCAACCAGGT 59 5536033 5536051 ACTCGTGTGATAGCCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 1 2 2 175 X 4528057 4528077 TCTAGGAATCGATTTGCTGTG 58 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG11436 FBgn0029713 FBtr0070699 2 1 1 60 X 4445761 4445780 TGCAATCATTGGGTTCTTCG 59 4445720 4445738 TGTGGAATGGAGAGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11436 FBgn0029713 FBtr0070699 1 1 1 60 X 4444845 4444868 ACCTCCAAGATGTATAGCTATGTG 60 4444808 4444827 GCTTCTTGAACTCCTTCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670,FBtr0070651,FBtr0301475,FBtr0070650 3 5 5 80 X 4251899 4252315 GAAATCCTCTTTAAGGACTGCA 58 4252356 4252374 GAAGGACAGGATTACCGGA 58 NA Drosophila melanogaster 61 Femcoat FBgn0041252 FBtr0070663 1 1 1 84 X 4136787 4136807 AGACAATGCTGAGATTTGGAC 58 4136616 4136634 TTCAATAGCCATCCGTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 3 3 3 86 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037707 4037725 TTACCTCGCACATTACCAC 57 NA Drosophila melanogaster 61 Ilp7 FBgn0044046 FBtr0070577 2 1 1 81 X 3562415 3562434 GAGGCTTGGATCAAGAAGAC 58 3562600 3562618 TTCGCAGAAACATGTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 1 2 3 107 X 3373500 3373518 CTTTGATCGCTGCACTGAG 59 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 CG14423 FBgn0029646 FBtr0070556 2 1 1 93 X 2839963 2839981 GATTATCAAGGGTGCCCGA 59 2840038 2840056 CTCCTGGTCCTGTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nmd3 FBgn0023542 FBtr0070425 3 1 1 104 X 2077718 2077736 CATTGGTTCTGGTCAACCG 59 2077572 2077653 CAAAGGGAGCTCTGAAATAGAC 58 NA Drosophila melanogaster 61 Cyp4ae1 FBgn0015036 FBtr0070388 2 1 1 80 X 2073233 2073253 CAAGTGTTTCGAGAGTTCCTC 59 2073292 2073367 CGAACTTATCATGCAAGTTGTC 58 NA Drosophila melanogaster 61 CG4325 FBgn0026878 FBtr0070342 2 1 1 75 X 1937434 1937646 AGAAAGCAATCAAGGACTTGC 59 1937379 1937399 CCTCAAAGTCCAGATAAAGCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG14817 FBgn0026089 FBtr0070365 2 1 1 121 X 1770937 1771013 TATCTCACCATGGAGCAGTC 59 1770835 1770853 TCCTCGATGGTAACGTGTG 59 NA Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070368,FBtr0070367 2 2 2 60 X 1761161 1761181 ACCTTTAGAGGACAGAACCAG 59 1761121 1761139 AAATGACCATCTTCAGCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 fs(1)N FBgn0004650 FBtr0070207 1 1 1 80 X 1218827 1218904 GTTACATGTAGAGGGACCGG 59 1218945 1218965 TAGTCTCCTGGAAAGCTTAGG 58 NA Drosophila melanogaster 61 CG11381 FBgn0029568 FBtr0070203 3 1 1 141 X 1097898 1097970 CTCAAAGCCGCAAAGATCC 59 1098075 1098093 ATGGGAGATACTTGTGGGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG3703 FBgn0040348 FBtr0070187 1 1 1 80 X 837380 837400 AATGCATCGTCCATACAAACG 59 836815 837339 ACCAGCAAATGGGAATTGAG 58 NA Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0070138 1 1 2 73 X 664417 664435 CTACAACATGACCGCACTG 58 664472 675518 GTTTGGCAATCTGGAGCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17778 FBgn0023534 FBtr0070080 3 1 1 205 X 389048 389067 ACTTACTGTCATGCCAAGAG 57 389586 389604 CCTCCATCTCGTCCATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Su(Ste):CR42431 FBgn0259862 FBtr0300159 1 1 1 149 U 8491306 8491324 CTGTGAACGAGTGAACTGG 58 8491437 8491455 ACTCGTTGACCTTGATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42424 FBgn0259855 FBtr0300152 1 1 1 60 U 7778851 7778875 AGTAATTCTCCGAATATAGTCCTGG 59 7778815 7778833 AGGGACTGCTAGTTAAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40930 FBgn0085538 FBtr0302237 3 1 1 60 U 7129251 7129271 GGTGATCCAATAAATGAGCCT 58 7129291 7129311 GGTCGTCAAAGTCTATACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41527 FBgn0085670 FBtr0302258 2 1 1 61 U 3398181 3398202 CAAATCGTAGACCATGCTACTC 59 3398218 3398242 CTCTATTGAGTAATATTGCCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Slip1 FBgn0024728 FBtr0089090 3 1 1 80 4 689138 689159 AGTCATTGTCCACAGTTTAACG 59 689198 689773 ATGACATCTGTTTGCAACCTC 59 NA Drosophila melanogaster 61 Or85e FBgn0026399 FBtr0081896 2 1 1 106 3R 4460653 4460826 GTAAATGGCCTGAGTTCGC 59 4460565 4460583 AATCTCAGCAGATCCGTCG 59 NA Drosophila melanogaster 61 tRNA:K5:87BC FBgn0011905 FBtr0082544 1 1 1 60 3R 7957084 7957102 TAGCTCAGTCGGTAGAGCA 59 7957126 7957144 GAACAGGGACTTGAACCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gprk2 FBgn0004834 FBtr0085788 3 1 1 104 3R 27279223 27279241 ATTGGTCGTGAGCTCTTCC 59 27279304 27279391 GATGTACTCGATCTCGTATTTGAC 59 NA Drosophila melanogaster 61 CG15555 FBgn0039839 FBtr0085764 1 1 1 94 3R 27092045 27092063 ATTTGGAAGGTGGAGTTCC 57 27092121 27092202 TTGCCACTTAGATTGTGGG 57 NA Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 2 2 2 120 3R 26705167 26705185 CACAGAGCCCTATGTCGAG 59 26704954 26705084 CTTGTTGGTGGACTTTGAGG 59 NA Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721,FBtr0085722 1 2 2 60 3R 26571927 26571945 CTCTGGTGTTGTCATCCGT 59 26571885 26571904 ACACTATCTTCGCAAGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PH4alphaNE1 FBgn0039780 FBtr0085688 3 1 1 82 3R 26325810 26325832 AGTATCTTACAAGGGAACTGAGG 59 26324897 26325768 GATGGAGGATAGCTCGCTC 59 NA Drosophila melanogaster 61 CG1983 FBgn0039751 FBtr0085574 1 1 1 82 3R 26003230 26003248 GGAATTCGACGTCAAAGCC 59 26003102 26003184 CTTGAACTTCTTTGGGCCG 59 NA Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531 3 1 2 96 3R 25642999 25643071 CTAGAAAGGTAAAGGCCATTCC 58 25642924 25642946 GGACCATTCATGGACTTAAATCC 59 NA Drosophila melanogaster 61 Bub3 FBgn0025457 FBtr0085465 1 1 1 107 3R 25500919 25500937 TCTTCTTGGGACGGAACAC 59 25500777 25500849 CACTATGTCCATGAAGGCAC 58 NA Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085433 1 1 2 80 3R 25318463 25319180 GATATCGATAAACATACTCCTGCG 59 25318406 25318424 TAGAGTAGGGACAGGGCTC 59 NA InUTR Drosophila melanogaster 61 CG14506 FBgn0039659 FBtr0085439 2 1 1 120 3R 25122787 25122806 AACCAGCTAGTGTCTATGGG 58 25122604 25122622 ATGAACATCAGGCGATCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14507 FBgn0039655 FBtr0113305 2 1 1 112 3R 25053033 25053051 ACCAGTCTCATGGTATCGC 59 25052650 25052958 CGAGTGTCCCTATGATCCTG 59 NA Drosophila melanogaster 61 CG11841 FBgn0039628 FBtr0085361 3 1 1 62 3R 24876864 24876882 AAATCCGGATCCATTTGCC 58 24876961 24876980 CGCTCTTCGAAGACAATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 3 1 1 60 3R 24857550 24857569 CAGAGGACTTTGTCTTTGCT 58 24857442 24857527 TTCTTTACGCGATCGTACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11828 FBgn0039616 FBtr0300734 1 1 1 80 3R 24749590 24749665 TCGCTATGCATGATTTACCA 57 24749706 24749726 GATCAGTGTTATCCTCCTTGG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299747,FBtr0299753,FBtr0299742,FBtr0301396,FBtr0299749,FBtr0299743,FBtr0299746,FBtr0299751,FBtr0299744 3 13 13 80 3R 24746004 24746086 ATATGGAGCGTGATTACTGCA 59 24746128 24746146 TTATTTCCAGCTTGGCAGC 58 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 3 4 4 88 3R 24700982 24711988 ACTGACACATGCCATACCC 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 CG10000 FBgn0039596 FBtr0085315 3 1 1 80 3R 24576873 24576955 GCATCATAGTTGTACTACACGT 58 24576814 24576835 TTGTGGAAACTAATCACCACAC 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 1 6 6 65 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 Gfat2 FBgn0039580 FBtr0085297 3 1 1 137 3R 24163696 24163716 ACATTAGGACTGTCCTCAAGC 59 24163377 24163597 GCTCCTTGACTTTCAGTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12426 FBgn0039552 FBtr0300050 1 1 1 86 3R 23697649 23697780 GATCCAATTGCGATGACGT 58 23697581 23697599 ATGATCGACCATGGACACC 59 NA Drosophila melanogaster 61 CG5612 FBgn0039529 FBtr0085200 1 1 1 80 3R 23449690 23449780 TGCTATACTCGATCACTATGCC 59 23449631 23449652 GTATAGTGACTGTACTCTGCCA 59 NA Drosophila melanogaster 61 CG31068 FBgn0051068 FBtr0085118 3 1 1 84 3R 23061696 23061789 AGTGAGGATAGCAACACCG 59 23061837 23061855 ATCTGGTTTCTCCTGCGAC 59 NA Drosophila melanogaster 61 CG31063 FBgn0051063 FBtr0085127 1 1 1 95 3R 23054184 23054485 CTGCTTTGCATGGAGAACG 59 23054107 23054126 ATTCTGGACGTAGTACAGCC 59 NA Drosophila melanogaster 61 CG5880 FBgn0039489 FBtr0085108 3 1 1 81 3R 22943453 22943471 GGAAATTGAGCCCTTGGAG 58 22943514 22943598 ATACTCATTCGGATGTGTCAC 58 NA Drosophila melanogaster 61 CG6074 FBgn0039486 FBtr0085133 2 1 1 103 3R 22929089 22929306 GTACAAGGGTTCCCTGACC 59 22929004 22929022 GACGGAATCGGGAGATCTG 59 NA Drosophila melanogaster 61 CG31076 FBgn0051076 FBtr0085079 2 1 1 81 3R 22814876 22814957 GAGTACTATAGCAACTACATTGCAC 59 22814819 22814838 ATTTGTAGGTGCGTTGAACC 59 NA Drosophila melanogaster 61 Ets97D FBgn0004510 FBtr0085088 2 1 1 92 3R 22737261 22737341 GTCAAGAGCTCTGATTCCGT 59 22737188 22737208 CTGCACTTGTCCATTATTCCC 59 NA Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085060 1 1 2 189 3R 22652406 22653007 AGTTCTGAGCAAGGAGGAG 58 22653160 22653178 CATTAATAGTGGCCGCTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 3 2 2 80 3R 22303150 22303169 ATTACTGCAAGATCGAGTGG 57 22303008 22303107 ATAAACGCTTGAGCACAGG 58 NA Drosophila melanogaster 61 CG5959 FBgn0039387 FBtr0084940 2 1 1 93 3R 21724995 21725080 TGCGCAATATTCAGGAGCT 59 21725135 21725155 CCAGGAATTTGCACAGTATCC 59 NA Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084885 2 1 2 93 3R 21445620 21445638 ATTCTCGTCAACTCGGTGG 59 21445694 21445777 AGTTCTCCTGCGATGAACTC 59 NA Drosophila melanogaster 61 CG5112 FBgn0039341 FBtr0084878 1 1 1 60 3R 21317813 21317833 GAACAAGTGGATTGAGTCGAG 59 21317854 21317873 CAGATCGTAGGGATTGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED28 FBgn0039337 FBtr0084836 2 1 1 61 3R 21302904 21302922 CAAACAGGAGCCGAATTCC 59 21302947 21302965 TGGTCTTCTGTACCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 1 2 2 153 3R 20954240 20954258 GAAACAACGGAAGAAACGC 58 20954374 20954464 CTTGAGCATCCTTTACTGCT 58 NA Drosophila melanogaster 61 fd96Ca FBgn0004897 FBtr0084770 2 1 1 60 3R 20910309 20910327 AATGTTACCCTCGTCGCTC 59 20910349 20910369 CTATTCTATTCTGCACCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11839 FBgn0039271 FBtr0084766 3 1 1 82 3R 20895737 20895904 AAAGCCAGCATTGGTTTCC 59 20895947 20895968 GAATCCTGCAAATAATGCAGGT 59 NA Drosophila melanogaster 61 CG31115 FBgn0051115 FBtr0290053 2 1 1 82 3R 20863475 20863493 AGAAGGTCCTGATAACGGC 59 20863539 20863615 GCACACCAGAATCTTTGCC 59 NA Drosophila melanogaster 61 tnc FBgn0039257 FBtr0084754 3 1 1 134 3R 20838939 20838957 TGCGAACTATGCTACTGCA 59 20839055 20839136 GTTCTCATGGTCGCAACTG 59 NA Drosophila melanogaster 61 CG34290 FBgn0085319 FBtr0299531 3 1 1 81 3R 20114903 20115035 CGAGTATATTTACTTCCAACCATCC 59 20114846 20114866 GAAATCACTCCAGTAACGACG 59 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 3 2 3 191 3R 19812924 19813001 CAGTAGCAGAAGACGATTAGAG 58 19813153 19813171 TGTTGTAGTGGGAGTTGGA 58 NA InUTR Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 1 4 4 80 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556384 19556402 GTTATTCTGTAGGCGCAGC 59 NA Drosophila melanogaster 61 RpS3 FBgn0002622 FBtr0084410 1 1 1 60 3R 19184598 19184879 TCCAAGAAACGCAAGTTCG 59 19184901 19184921 TCAGGAACTCGTTCAATTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088,FBtr0084388 3 2 2 80 3R 19076819 19076902 GATTCCCGAAATAGCTTTGC 57 19076758 19076777 ATGAAATCGTAGTCCACCTC 57 NA Drosophila melanogaster 61 Tpl94D FBgn0051281 FBtr0084339 1 1 1 80 3R 18792267 18792356 TCGATATGCTAACATGAAGGAC 58 18792395 18792415 GTAATCTTTCTACGAGCAGCC 59 NA Drosophila melanogaster 61 CG42686 FBgn0261572 FBtr0302858 2 1 1 198 3R 18483995 18484013 CCCACCAACATCAGAATGC 59 18484175 18484453 GCTGGAATTCTGAGGAGCA 59 NA Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 1 2 2 84 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198001 18198019 TCTTCTTTCCGACCTGCAG 59 NA Drosophila melanogaster 61 lsn FBgn0260940 FBtr0084135 2 1 1 77 3R 17691669 17691750 GATCAAGGATTTGGGCTGG 58 17691791 17691809 ATCCAACAGAGACCTTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 glec FBgn0015229 FBtr0084157 1 1 1 134 3R 17681228 17681246 CGCAAAGCTGATCCTTCAG 59 17677589 17681130 TTGTACATGCCTTTGAGGC 58 NA Drosophila melanogaster 61 Snmp FBgn0260004 FBtr0084027 2 1 1 80 3R 16993568 16993586 AATCCGGATGAGGTATCCG 58 16993440 16993524 CTTGTCCTTCCACTCATCG 58 NA Drosophila melanogaster 61 CG5793 FBgn0038858 FBtr0084013 3 1 1 84 3R 16953769 16953855 AATTACATGGACGTTGTGCTG 59 16953901 16953919 GGAGGTACGAAGATGTGGG 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 3 3 3 82 3R 16678288 16678430 TTGTTACAACAGGGAGGCA 59 16678224 16678242 ACGATAACCACGATCCACC 59 NA Drosophila melanogaster 61 CG17190 FBgn0038761 FBtr0083845 2 1 1 60 3R 15837892 15837911 CCTGATAAACACAGTTGGCG 59 15837851 15837872 ATGAGTATTGCTCTTCACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6040 FBgn0038679 FBtr0083729 1 1 1 82 3R 14955610 14955628 AGCTATTACGGTAGCGAGG 58 14955674 14955759 TTCTTGTTAGCCTGTGGCA 59 NA Drosophila melanogaster 61 CG34284 FBgn0085313 FBtr0112480 3 1 1 92 3R 14728592 14728610 TAGCTTTCTGCGTCTTGGT 59 14728442 14728460 TGAACTGTTCATTGGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 2 1 1 124 3R 14231131 14231212 CCCATCAAGATTGTCAGGG 57 14231299 14231318 TAGTTGTCGTTCAGGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 2 3 3 115 3R 14204681 14204957 GCAGTGAAGGATGAGATCG 58 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 CG7126 FBgn0038602 FBtr0083593 3 1 1 93 3R 14128054 14128140 ATTGATAGAGCAACAGTTCTCG 58 14127982 14128003 AAAGTCTATTTCCGAGTCATCC 58 NA Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 3 1 1 95 3R 13559515 13559618 TGAAATCACTTACCACGAACTG 59 13559674 13559692 CGGATGCAGTTGATCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 1 2 2 60 3R 12576950 12576971 ATTCACCAGAATGGAACAATCG 59 12576911 12576933 CCACATACCCAATAGTATGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083347 1 2 6 81 3R 12550978 12550997 CGGCATATCAACAGACATGG 59 12484785 12536293 ACCATTTGTACCTAGCCAGTC 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 3 2 2 96 3R 12006908 12010688 ACTAATTGCGCTCGTTTGC 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 CG5013 FBgn0038396 FBtr0083223 1 1 1 189 3R 11875630 11875699 ATACCTGAGCTGCTTCAGG 59 11875850 11875870 TGCAGTTGTCAGTAAGTACCA 59 NA Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 3 2 2 176 3R 11660801 11660929 AAATCAAGTCCGACGTGGA 59 11661069 11661087 CATAGACGGCGTTCAATGG 59 NA Drosophila melanogaster 61 Acyp2 FBgn0038363 FBtr0083174 2 1 1 160 3R 11618603 11618621 AGATCTTTGGACGAGTGCA 59 11618867 11618944 CAGCCAATGTTTCATTTCCA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5614 FBgn0038359 FBtr0083171 3 1 1 60 3R 11606221 11606241 CACCCAAGAGCATTAGTACTC 58 11606262 11606281 ACGTATGACTTCGGATTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31294 FBgn0051294 FBtr0083198 1 1 1 90 3R 11541883 11541901 GCAAATTGACGTATCGCCA 59 11541750 11541829 CTCCTCGTTACCCAACCTC 59 NA Drosophila melanogaster 61 Act88F FBgn0000047 FBtr0083143 2 1 1 101 3R 11267252 11267331 CATGTACCCTGGTATTGCC 58 11267396 11267414 GAGTACTTCCTCTCGGGTG 58 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 2 2 2 93 3R 11249454 11249475 CAGGTGAATGTCAAGTATGAGG 58 11249256 11249401 TGTCCAGGTTCTTCTCTGTG 59 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 2 2 2 67 3R 11170642 11170660 TTAAGGTCGACATAGCGGT 58 11170528 11170611 AATGGAGTAGGCAACGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-ser FBgn0021750 FBtr0083086 1 1 1 60 3R 11166913 11166932 AGTTCTCTGAATTAGCCCGT 58 11166953 11166973 GTGTAGTTACCCAAGTGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42404 FBgn0259823 FBtr0300117 1 1 1 97 3R 11078060 11078139 CAGCATTGGCTACATAGCC 58 11078200 11078218 ACAAGGGATAGTGGGTTGC 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083055 3 1 6 96 3R 11068897 11070094 GGTTGAGTGAATGTCTAAAGCTC 59 11070150 11070168 GATGATCTCGACCTTGCCA 59 NA InUTR Drosophila melanogaster 61 CG12241 FBgn0038304 FBtr0083051 3 1 1 111 3R 11045774 11045859 CCACGATATAGTTAAAGCTTCTAGC 59 11045927 11045946 CCCATTCGGATTGCTAAAGC 59 NA Drosophila melanogaster 61 CG31304 FBgn0051304 FBtr0083040 1 1 1 80 3R 10926015 10926034 ATAATGGAGGATCGGGATGG 58 10925897 10925975 ATTCAACACATTACCTGTCAGC 59 NA Drosophila melanogaster 61 CG9588 FBgn0038166 FBtr0082849 3 1 1 85 3R 9501579 9501599 ATATCACGGATCTTGCTCCTG 59 9501450 9501532 ACAGAGACCAGCTCTTTCG 59 NA Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082785 1 1 2 245 3R 9251711 9251730 GCAGTTCTACAGCGAAAGTG 59 9252477 9252496 ATCACCAACATAGGAGTCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 3 2 2 81 3R 8901962 8901985 AGAAGACCCTGTATCAGTATATCC 58 8902025 8902131 TGTCCTTTGTACAGCAGGA 58 NA Drosophila melanogaster 61 Paip2 FBgn0038100 FBtr0082693 3 1 1 170 3R 8809594 8809675 TTCGACAAGAACGAACTGC 58 8809872 8809890 TTCAACATCACACTGGCTC 58 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290273 1 1 3 80 3R 8793095 8793191 TCAGTATCGATCGAAATACCAG 57 8793036 8793055 TTGAGTTTCTCCGATTGACG 58 NA InUTR Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 3 2 2 136 3R 8539855 8539929 ATAGCCGTGGTGTCATCAC 59 8539737 8539755 TCCAATCAGGACATTGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114500 3 1 6 220 3R 8521769 8521863 TATGAAGGCAATGGATGCCA 59 8522470 8522488 TGTTGAGACTCCCGATGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6753 FBgn0038070 FBtr0301150 2 1 1 82 3R 8467005 8467280 CTATGCCTCATCGGATGTG 57 8466941 8466959 ACACATCGTATCCTGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17202 FBgn0038043 FBtr0082587 1 1 1 89 3R 8248584 8248664 TCCTTTAAGCCCATTGACC 57 8248717 8248735 TATGAAGAGCTTGGTCAGC 57 NA Drosophila melanogaster 61 GstD7 FBgn0010043 FBtr0082574 3 1 1 60 3R 8204610 8204631 TACTTCTTCCTAATCTTCCGCA 59 8204651 8204670 TAACCTTGTCCAGAGCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD10 FBgn0042206 FBtr0082609 2 1 1 104 3R 8191296 8191423 TTACCACGTAGTTTCCAGAG 57 8191211 8191229 GGCTGTCATCAGAACAGAG 58 NA InUTR Drosophila melanogaster 61 CG18547 FBgn0037973 FBtr0082506 1 1 1 80 3R 7805235 7805310 AAGACTCGATACGGTCCTC 58 7805173 7805195 GACTTGAAGAAATCCAGGTACTC 59 NA Drosophila melanogaster 61 CG14731 FBgn0037964 FBtr0082478 1 1 1 81 3R 7757603 7757625 CGTCTTTCAGTTCTAATACTGGG 59 7757665 7758001 TCAAGTCCCTTACTCGACTG 58 NA Drosophila melanogaster 61 CG6908 FBgn0037936 FBtr0082437 1 1 1 80 3R 7514792 7514877 ACTTGACAAATGATGTGCAGG 59 7514732 7514750 ATTCTCCCTCGATCTTGGG 58 NA Drosophila melanogaster 61 CG6764 FBgn0037899 FBtr0082403 3 1 1 60 3R 7257047 7257136 TGCAAGGTCTTCAAGTTCTG 58 7257006 7257026 GATTCTTCTTGCGCTTAAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Da FBgn0040259 FBtr0082338 1 1 1 80 3R 6983144 6983162 CCTTCGAGCTGAAGAAACC 58 6983206 6983808 CAATTCTTCCCTGCATGGA 57 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 1 4 4 85 3R 6525744 6525762 CTACGGAGATCGGTATCGA 57 6525808 6525952 CAGATCGTTTATCTTATCGAGC 57 NA Drosophila melanogaster 61 CG6345 FBgn0037816 FBtr0082258 1 1 1 60 3R 6241350 6241370 AGTATCCTGAAGGAGAATGGT 58 6241310 6241328 TTATGACATCGGCCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6325 FBgn0037814 FBtr0082260 1 1 1 80 3R 6230156 6230177 TGCACAAAGAAGCTAAGAAGAC 59 6230033 6230115 TATGCAGTCGTCCTCTTCG 59 NA Drosophila melanogaster 61 Sirt6 FBgn0037802 FBtr0082242 1 1 1 60 3R 6086602 6086620 CGATCCTACAAAGCAGTCC 58 6086560 6086580 GGTATTTACATTGCTTGTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6208 FBgn0037789 FBtr0082195 1 1 1 60 3R 5947032 5947052 GATAGGACAGACGGATAGTGC 59 5946992 5947012 TGCCTTGAAATACATACCAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33630 FBgn0053630 FBtr0091607 1 1 1 98 3R 5888440 5888526 GTCCAAAGAAAGCAGTAGTAGC 59 5888585 5888603 AGTGGGATCGATCTTCGTG 59 NA Drosophila melanogaster 61 CG8273 FBgn0037716 FBtr0082072 2 1 1 110 3R 5405792 5405810 CGTCTTAGTGCCATTCGAC 58 5405943 5405961 CAGATGCTTTGAGTTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 by FBgn0000244 FBtr0302382 2 1 3 116 3R 5354672 5354991 ACATAATTCCAGGCACTGGA 59 5354575 5354596 AGCTCATTATATCGCAAGACAC 58 NA InUTR Drosophila melanogaster 61 Task7 FBgn0037690 FBtr0082045 1 1 1 80 3R 5237205 5237277 ATGGGCTATGCTATGGTGG 59 5237143 5237164 GGATGCAAACTTATTCAGACGT 59 NA Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 1 2 2 96 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088726 5088807 GATGGCAATCCTCAAACTCTC 59 NA Drosophila melanogaster 61 CG11986 FBgn0037656 FBtr0081967 1 1 1 85 3R 4841234 4841303 ACCTGTCTAACTCTAGACCCT 59 4841350 4841368 TCTTTGAAATCCGGCTCCT 59 NA Drosophila melanogaster 61 CG11967 FBgn0037646 FBtr0081958 1 1 1 84 3R 4807814 4807832 AATAGTTTGCGGACACAGC 58 4807879 4807969 TCGGTTAAGCTTAGAAGCGA 59 NA Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081932 2 1 2 150 3R 4645735 4645753 ACGCTTGTCGAAATATCGA 57 4644939 4644959 TCTTCGCTGATTTAACTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0302489,FBtr0081943 1 2 2 158 3R 4580266 4580284 TACTCCAATCGATCGGGAC 58 4580050 4580068 AATGGGCAGATCAATGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Coq2 FBgn0037574 FBtr0081858 3 1 1 156 3R 4141074 4141151 TGCAGCAGATCTATTCCCTC 59 4140937 4140956 GTTAGTGAGGATTGTCGCTG 58 NA Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091720 2 1 2 82 3R 4069856 4069929 CTATAGAGGGAAGTGGCCA 57 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 puc FBgn0243512 FBtr0081792 1 1 1 81 3R 3934028 3934046 TCATCAACGGCAATGAACG 59 3934089 3936807 TTTCTATATCGTAGACCGCCG 59 NA Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 3 2 2 80 3R 3670933 3670951 TTTGATAGCCACCATCAGG 57 3670995 3671116 TTTGGATTGAGCAGGTAGG 57 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 1 2 2 88 3R 2972718 2972742 GGCCTTGGATATACAATATCAACTC 59 2972593 2972673 TTTGCGGATTCATCTTCGAG 58 NA Drosophila melanogaster 61 CG42651 FBgn0261503 FBtr0302395 3 1 1 156 3R 2638291 2638309 GAACAGTGACACTTGGCAC 59 2636113 2636131 TTGGTGAATCGGTAACGAC 57 NA DesignNoJunction Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 2 4 4 80 3R 2536680 2537244 GATGATCAGTCCGATAGTAACTC 58 2536622 2536641 GGAATCGGGTATATCATCGG 57 NA Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 3 2 2 114 3R 2268842 2268860 TATTTCCACGAGGAGCAGC 59 2268937 2269169 CTGCTAGACCTTCCAATGGA 59 NA Drosophila melanogaster 61 CG10286 FBgn0037439 FBtr0081717 2 1 1 60 3R 2196348 2196367 TCCTATTGACTTACTGTGCC 57 2196389 2196408 GCATCTAGTCCTTCAGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi15 FBgn0037424 FBtr0078607 3 1 1 100 3R 2127881 2127900 CTAAACCTCTCCTTCTCCGG 59 2128523 2128541 ATCTTCTTCATGCGCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10991 FBgn0037389 FBtr0078646 2 1 1 123 3R 1674781 1675005 TTAACAGCGTCAGCATAAGTC 58 1675090 1675108 TAATAGGACACTGCGTCGG 59 NA Drosophila melanogaster 61 CG10979 FBgn0037379 FBtr0078631 2 1 1 80 3R 1621008 1621111 CGGATACACAGATCAGAATTCC 58 1621149 1621170 CGTAGCATATGTTCAATGTCCT 58 NA Drosophila melanogaster 61 CG14669 FBgn0037326 FBtr0078679 2 1 1 112 3R 1280609 1280628 TTTGACAATGTGACTGAGGC 58 1281082 1281181 TAGTTATATTGCGCCGAGC 57 NA Drosophila melanogaster 61 vps24 FBgn0037231 FBtr0078958 2 1 1 133 3R 136072 136145 AATCAGCTATCCACCTTGC 57 135957 135977 GCCTTCATCATTTCCTTTGAC 57 NA Drosophila melanogaster 61 CG34305 FBgn0085334 FBtr0112501 2 1 1 120 3R 68761 68844 CTTCATAATCCTGCTAGTCCTG 58 68662 68683 CTGAATATTAGCCAAATCCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 1 5 5 126 3R 66130 66148 CAAGAGGACTTGGACTCGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 DhpD FBgn0261436 FBtr0078986 1 1 1 87 3R 53928 53948 AGAGATCGAGATGGTAAAGGG 58 53806 53884 CAGTACAGTCTTATTCGTTAGCAG 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-1837b FBgn0082995 FBtr0113608 3 1 1 63 3L 5757276 5757294 TGCGGATAGAAACTGTGTC 57 5757231 5757250 AGACCGAACACTTCTATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR34031 FBgn0054031 FBtr0100086 2 1 1 104 3L 23178380 23178402 CGAACAGAAAGTATTCTTCCCTC 59 23178536 23178554 ACTATAGGCCTGACGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CR42548 FBgn0260721 FBtr0301175 3 1 1 101 3L 17878597 17878616 AAGGGCTTGATAATTGTGGC 58 17878477 17878495 GTTCATGTAGCCAGCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG40053 FBgn0058053 FBtr0111154 2 1 1 88 3L 24004392 24004410 TTCTTACTCCACAAACGCC 58 24004250 24004340 CACTGAAACCACATTCCGA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 2 2 2 90 3L 23332715 23332734 GATGTCACTTGGAATCGCAC 59 23334563 23334581 AATAATCCCTCACAGGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG32461 FBgn0052461 FBtr0078567 3 1 1 60 3L 22947880 22947899 GGTGCTTCCAATAAGACTCC 58 22947839 22947859 TTCGGCTTATACCACAATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32461 FBgn0052461 FBtr0078567 2 1 1 60 3L 22947880 22947899 GGTGCTTCCAATAAGACTCC 58 22947839 22947858 TTCGGCTTATACCACAATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11438 FBgn0037164 FBtr0078504 2 1 1 60 3L 22460665 22460683 TCCTCTTCGTCATGTTCGG 59 22460704 22460725 TGGTGGTAATAGTCGATGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078474 2 1 2 84 3L 21944191 21944266 TGAAGGTAATGTACCCTGTGAC 59 21944311 21944329 GGGAAAGATCTCGGAGGTG 59 NA Drosophila melanogaster 61 CG14563 FBgn0037139 FBtr0078444 3 1 1 143 3L 21835218 21835236 AACCCGTACTCGATGTACG 59 21835013 21835031 GTAGTATCCGCTTCCACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 1 1 1 66 3L 21209785 21209803 AACTTCTTGACCTCCGTGG 59 21209672 21209757 TGTTAATCGTCAGTTTCAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Sfp77F FBgn0259972 FBtr0300317 1 1 1 80 3L 20890355 20890433 ATACAAGCCACTTCTTTGTGAG 59 20890296 20890317 TCGTCCTGATTTACACATTGTG 59 NA Drosophila melanogaster 61 CG13252 FBgn0037016 FBtr0078245 3 1 1 114 3L 20730563 20735699 AACGACACTTGACCAGGAG 59 20735777 20735795 CACCGCAAGTAGGTTATGG 58 NA DesignRelaxed Drosophila melanogaster 61 Ide FBgn0001247 FBtr0273273 1 1 1 80 3L 20366709 20366786 CAAAGATACTGTGCAATCCTG 57 20366649 20366668 GTTGGTATGAAGCTGTTTGG 57 NA Drosophila melanogaster 61 CG7335 FBgn0036941 FBtr0074865 1 1 1 60 3L 20125755 20125773 GTGGATCTGGACAACTTGC 58 20125713 20125732 AGACGTAGTCCACCATACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-J FBgn0036940 FBtr0074866 1 1 1 62 3L 20124810 20124828 GGATTCCCAGCATAAACGC 59 20124708 20124729 GCAGCCATATAACTAATAAGCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8004 FBgn0036920 FBtr0074915 2 1 1 84 3L 19921370 19921461 TCTACCAGCCGTATGAAGC 59 19921304 19921323 TTGCACATCTTCAGGTAAGC 58 NA Drosophila melanogaster 61 Kap-alpha1 FBgn0024889 FBtr0074881 1 1 1 90 3L 19802027 19802045 CTACCTGTCAGATGGTCCC 58 19802097 19802184 CTGAGGATGTAATAGCAGCTC 58 NA Drosophila melanogaster 61 CG42529 FBgn0260434 FBtr0300858 1 1 1 60 3L 19722982 19723001 ACAATGTACCCACTAACCTC 57 19723024 19723042 GTTACCATCACCGTTCGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr76Bb FBgn0036879 FBtr0074933 2 1 1 65 3L 19513040 19513061 CTATCCCAAGTACCAATTCGAC 58 19513087 19513105 CACTGGCTCTTCTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33255 FBgn0053255 FBtr0074997 1 1 1 124 3L 19417907 19417925 AACTACAATGGAATCGCCG 58 19418010 19418409 TTTGGAATGAGAAGAACTAGCG 58 NA Drosophila melanogaster 61 CG32198 FBgn0052198 FBtr0075099 3 1 1 60 3L 18520143 18520162 CTTTGCTCTTGATGATCCCA 58 18520184 18520203 CGAAGTTGGAGATGTTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 2 2 2 118 3L 18106214 18106232 TGCTTACTGCAATAAGCGT 57 18112923 18112941 GATCAGGGTGATCCTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32181 FBgn0052181 FBtr0301018 3 1 1 81 3L 17754352 17754470 TCAAACGAAGTACGAAACCA 57 17754512 17754532 TGGTTTACATCTAGCGTTTCG 58 NA Drosophila melanogaster 61 CG14059 FBgn0036690 FBtr0290221 1 1 1 187 3L 17023381 17023823 TGAATCGACTTGGATCCGG 59 17023212 17023230 GTGATCCCTCTTGAAGCGA 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302647,FBtr0302649,FBtr0302651,FBtr0302648 3 5 5 80 3L 16984293 16984314 GATTACGACTCCTTTGAGACAG 58 16984352 16984435 GCTGTCATTGTAGTTTCTTTGC 58 NA Drosophila melanogaster 61 sina FBgn0003410 FBtr0075332 3 1 2 144 3L 16847495 16847513 CGTAAAGGCTGACTGACTG 58 16847621 16849410 TCTTGTGCTTCTGTATGGC 57 NA InUTR Drosophila melanogaster 61 Int6 FBgn0025582 FBtr0075345 1 1 1 80 3L 16779403 16779421 GCAACTATCAGGAGTCCAC 57 16779255 16779362 GCACATTAAGGTAGTTCTTGTC 57 NA Drosophila melanogaster 61 CG9692 FBgn0036654 FBtr0075317 3 1 1 70 3L 16698119 16698137 GAAATCCCAGTACACCCGA 59 16698234 16698252 TAGTCTTGGGCTCTAGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653,FBtr0300654 2 2 2 80 3L 16513215 16513233 AAACATTATCGACGCCTCC 58 16511681 16513171 CTCTCGCATCCTGTATCTG 57 NA Drosophila melanogaster 61 CG34249 FBgn0085278 FBtr0112443 3 1 1 113 3L 16354826 16354847 GCGTGTAATTGATATGCAATCG 59 16354734 16354752 GTTGCAGTTGAAGTTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4962 FBgn0036597 FBtr0075471 2 1 1 60 3L 16288500 16288582 TGTTCAAACTGATTGCCCTC 58 16288459 16288477 GAGATTACTCCGGCATTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5157 FBgn0036575 FBtr0075490 2 1 1 60 3L 16130056 16130076 TGTACGATGTAACCAAGTTCC 58 16130016 16130036 TATTCGAGTAGTGCTTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18081 FBgn0036537 FBtr0075537 3 1 1 188 3L 15827973 15828304 GGGTTAATTAGCAAGAAATGGC 58 15827524 15827542 TGTAAGTCTTCGGATCGGG 58 NA InUTR Drosophila melanogaster 61 CG13445 FBgn0036532 FBtr0075503 2 1 1 70 3L 15802624 15802705 GTTCTTTGGTATCATCGCCA 58 15802738 15802756 CATCATCACCCTTGTCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 Eig71Ei FBgn0014849 FBtr0075574 1 1 1 87 3L 15653062 15653080 TTAACGACTACTGTCGCCG 59 15653130 15653210 CGCACAGTAGATAAACAGGC 59 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565,FBtr0075566 2 2 2 81 3L 15577954 15578026 TCATCTGGAAGAACTGCGA 58 15578071 15578089 ATGATGTTCACCTCTCCGT 58 NA Drosophila melanogaster 61 CG6888 FBgn0036490 FBtr0075644 3 1 1 60 3L 15201036 15201057 TCAATATTAACCAAGTGGCTCC 58 15201078 15201096 CGATAACCACCGGATACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or71a FBgn0036474 FBtr0075659 1 1 1 80 3L 15070458 15070477 TGTACTTAAATCGACCGGTG 57 15070347 15070418 GATTCATGGTCTTGGTAAACAG 57 NA Drosophila melanogaster 61 gnu FBgn0001120 FBtr0075697 2 1 1 124 3L 14796262 14796339 CTATAGAGATCCCGCATCCC 59 14796157 14796175 CAAAGAGTCCGTATCTCGC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0100443,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 9 9 80 3L 14746560 14746738 AACAGAGAAACCACGTTCAC 58 14746499 14746517 CGGGATTGACGAATGACAG 58 NA Nonspecific Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075687 1 1 2 60 3L 14698866 14698885 AAGTGTTGTGAATTGCTCCT 58 14698908 14698926 CATCCAGGTCGTTGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 3 3 3 80 3L 14737473 14737492 GTCAACTATATGCCAAGCGA 58 14737534 14737640 CCATGATGGACGTATTCTCC 58 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 1 3 3 80 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621438 14621458 TCGTTGTTTATCATCTGCAGG 58 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 3 3 3 80 3L 14620527 14620546 CTATGTGACCTTTGGAGCAC 58 14620589 14620667 CGCCATGGAGTCAAATCAC 59 NA Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 2 2 2 103 3L 14555005 14555027 CTGAGATCATATCAACACTCTCG 58 14555088 14555160 TTTCGCTTCCTCAAATGTCTC 59 NA Drosophila melanogaster 61 CG9592 FBgn0036426 FBtr0290282 1 1 1 60 3L 14511127 14511145 CTCGCAAGTCAACAAGGAG 58 14511168 14511187 ATGCAGTCTAACTCTAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13484 FBgn0036406 FBtr0075780 1 1 1 66 3L 14045953 14045971 AAACGTTGGCTTCTACGAG 58 14045905 14045928 GGATTTGTTCTGGTAGAAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17361 FBgn0036395 FBtr0075767 3 1 1 60 3L 13990379 13990400 TGGATGAATTGGTGAAGATGTG 59 13990421 13990439 ATGTCTAGCAGGTCCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32135 FBgn0052135 FBtr0075760 1 1 1 60 3L 13960260 13960281 AACAGACGAATTTACAACTGCC 59 13960302 13960320 TGAATCCACCTCATAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 3 2 2 118 3L 13501536 13501555 CATTACGAATAACTCCGGCG 59 13501634 13502158 CTATTTGAGCAATGGGAAGGG 59 NA Drosophila melanogaster 61 CG17687 FBgn0036348 FBtr0075838 3 1 1 87 3L 13346811 13346829 ATGGGCCAGTTTACAAAGC 58 13346879 13346957 TTCCAGCTTCCTGAATTTGG 58 NA Drosophila melanogaster 61 CG14113 FBgn0040814 FBtr0075837 1 1 1 96 3L 13322327 13322399 GAAGAAGAGGTATACACGGAG 57 13322457 13322475 ATCTGAGTGCATACTGCAG 57 NA Drosophila melanogaster 61 CG42481 FBgn0259971 FBtr0300315 3 1 1 108 3L 13292082 13292100 TCTGTTGGTCATCCTCTGC 59 13291992 13292011 GTAGCATGGCTCGTTATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075896,FBtr0075895 1 2 2 99 3L 13013916 13014181 ACATTTCGGGCTTCTTCCT 59 13013835 13013853 GCGCTGAGGTTCATTAGGA 59 NA Drosophila melanogaster 61 CG10943 FBgn0036320 FBtr0075936 3 1 1 60 3L 12855599 12855619 TAGAGGAGGAATTGTCAACCT 58 12855559 12855579 GTCTCAAGATCTTGGCTAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNP69D FBgn0016940 FBtr0075952 1 1 1 74 3L 12727061 12727603 GATTCCTTATGAAGCTAAGTCACG 59 12727010 12727028 TAATGGTGCCGTGGATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32102 FBgn0052102 FBtr0075978 2 1 1 204 3L 12462686 12462873 TCATTATCGCCAGCTTCCA 59 12462500 12462521 CGAAACTGCAACTAAACTACAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 prc FBgn0028573 FBtr0076064 2 1 1 80 3L 11953482 11953564 GGAACATCGAGCTTTGGTG 59 11953420 11953439 CCTGTAAGTAGCAACCTGCT 59 NA Drosophila melanogaster 61 CG7248 FBgn0036229 FBtr0076043 2 1 1 188 3L 11947195 11947216 CAAGACTTTGTGACATTCACAC 58 11947451 11947470 AAGCCAAAGAATAAACGGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17826 FBgn0036227 FBtr0076042 2 1 1 120 3L 11942990 11943067 TAAACACTATGGAGTGGCCC 59 11943144 11943168 GATCAGATACTTGGTACAATCATCC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0301135,FBtr0076078,FBtr0110869 1 3 6 61 3L 11815356 11815374 TTAGTTTACCAGCCCTGGA 57 11815181 11815337 CTATGATATCACCAATATTCTCGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG7339 FBgn0036188 FBtr0076107 3 1 1 97 3L 11641964 11641982 GGACAATGTGAGGATTGCG 59 11642041 11642118 TAAGAAGGACCTTATTGGCCA 58 NA Drosophila melanogaster 61 PCID2 FBgn0036184 FBtr0076102 2 1 1 60 3L 11620493 11620513 GGAGTGGTATCTATCTGCTGG 59 11620534 11620553 TTGAACAGGTTGCGATACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33267 FBgn0053267 FBtr0089845 1 1 1 143 3L 11557927 11565514 CTACAGATGATGCCACCAC 58 11565621 11565639 TGCGCTTATAGTGGATCAC 57 NA Drosophila melanogaster 61 CG32081 FBgn0052081 FBtr0076198 3 1 1 80 3L 11021750 11021769 ATGGGATACTGGCGTTATGG 59 11021810 11021889 AACTTGCGAAAGTACTTCGTC 59 NA Drosophila melanogaster 61 CG14151 FBgn0036089 FBtr0076280 1 1 1 102 3L 10621376 10621454 GTATTTGCCAGGCATGGTC 59 10621292 10621310 TTCGCCTATAGATACCCGC 58 NA Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 1 1 1 68 3L 10209383 10209461 TCTGTTTCGCATCAAAGGC 59 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076348 2 1 5 280 3L 9965488 9966030 AAACAGCCAGAATGTCCCT 59 9966366 9966384 GATGTTCATGGTGAGGCTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Taf2 FBgn0011836 FBtr0076361 3 1 1 83 3L 9878988 9879007 ACCTTAACACCTGTGGTCTC 59 9878864 9878942 TAGCACAAGTTTCGCATCC 58 NA Drosophila melanogaster 61 CG32052 FBgn0044328 FBtr0273387 1 1 1 82 3L 9798476 9799013 ACAGGAAACGGTATACATCGT 59 9799057 9799075 AAGTCAACTGGTTGTGCTG 58 NA Drosophila melanogaster 61 CG14174 FBgn0036036 FBtr0076402 3 1 1 74 3L 9712474 9712492 TGAAACAACCTCCGTTGGT 59 9712594 9712612 TGTTGATGACCACGAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3408 FBgn0036008 FBtr0076426 2 1 1 112 3L 9501402 9501421 CGGTACTTAGACCTGAAGGG 59 9501223 9501330 CAGATGCTGACTGTATTCTTGG 59 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076459 1 1 5 123 3L 9423824 9423842 TAGCTCAGTTGCTCGAACC 59 9423929 9427506 TCATCCGAACTCTGTTGCT 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491,FBtr0301773,FBtr0089490,FBtr0089492,FBtr0300290 1 5 6 115 3L 9336132 9336150 CGATAATCGGGACAAGTGG 58 9336229 9338017 GATCTTCGTGTTTGGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4484 FBgn0035968 FBtr0076503 3 1 1 112 3L 9196869 9197213 TAATGAAGTGGTTCGGAACC 57 9196776 9196794 GCTGAATACCAAGACTCCC 57 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534,FBtr0076535 3 2 3 133 3L 9163797 9164102 AATTACGGTGGACCTCCTG 59 9156019 9156037 TACGCTAAACGAGGATCGG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 1 5 5 81 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986078 8986097 GCGGTTGTTAATCCTATCGT 58 NA Drosophila melanogaster 61 CG13313 FBgn0035941 FBtr0076512 1 1 1 83 3L 8952220 8952238 GGCGAATGATACCCTCCTC 59 8952284 8952910 TAGAAAGGAAACCAGCGAGG 59 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 3 3 4 111 3L 8942372 8942767 GTTACCAAAGGCCAACAGTG 59 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 3 2 2 82 3L 8430189 8430209 GACGATGTGGAAGGTAATGTC 58 8430061 8430148 CCTAGATTACCTCTTTGGTTCG 58 NA Drosophila melanogaster 61 mkg-p FBgn0035889 FBtr0076664,FBtr0076665 1 2 2 84 3L 8397257 8397277 GCATAGAGAAGGAGATGAGGG 59 8397141 8397211 ATGTCGCTCTCCTTCAGTG 59 NA Nonspecific Drosophila melanogaster 61 CG7185 FBgn0035872 FBtr0076710 1 1 1 181 3L 8305840 8306118 GACCAATGTTCCAAGGAGG 58 8305677 8305695 AAAGAATGCTGGGTTCACG 58 NA Drosophila melanogaster 61 mus301 FBgn0002899 FBtr0076689 2 1 1 89 3L 8131655 8131673 GCAAGGGCGAATTCTATGG 59 8131724 8131803 CGTCCTGCCATTCATAAAGAC 59 NA Drosophila melanogaster 61 CG7506 FBgn0035805 FBtr0076822 1 1 1 86 3L 7634114 7634193 AAATCAAGACTACTTTCCGACC 58 7634049 7634067 GAGGTCGTTTGTTGACCAG 58 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 Cyp4d8 FBgn0015033 FBtr0076832 3 1 1 81 3L 7487058 7487137 TTCAAATACACCCATTCCGT 57 7486996 7487016 GATGTACACCAAAGATTCCGA 58 NA Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870,FBtr0076871 3 2 2 81 3L 7368206 7368290 CAAATAACAGGGCTCTCATGC 59 7368145 7368163 ACACTGCTCTCGAAGTAGC 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 2 2 4 85 3L 7059753 7059772 CATCAATCTCAAGGATCGGG 58 7059820 7059972 CTAATCAGTCAGCCACTCC 57 NA InUTR Drosophila melanogaster 61 Surf1 FBgn0029117 FBtr0076897 1 1 1 80 3L 6951913 6951994 GCTCTACCAGACGATCTCAC 59 6952036 6952055 CTTGTCGTGAAGGAAACGTC 59 NA Drosophila melanogaster 61 ndl FBgn0002926 FBtr0076984 3 1 1 81 3L 6587932 6588015 TGTTTCACATATCTGCAAGCC 59 6587871 6587889 AACTCTCGTCGCTCTTGTC 59 NA Drosophila melanogaster 61 Or65c FBgn0041623 FBtr0077006 2 1 1 82 3L 6321996 6322017 CAGGAGCCTCTGATTATGAGAG 59 6322055 6322135 CCATAGCATTGGTTAAGTATAGCG 59 NA Drosophila melanogaster 61 CG13298 FBgn0035692 FBtr0077015 3 1 1 120 3L 6185991 6186079 AACAAGCGCAACCATATCC 58 6185889 6185907 GAATGGCTCCAAATTTGCC 57 NA Drosophila melanogaster 61 CG34266 FBgn0085295 FBtr0112461 2 1 1 67 3L 4677960 4677978 TTATAGCCGAGCAAAGGCA 59 4678009 4678027 CTCCCTGTTGAGGATCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34266 FBgn0085295 FBtr0112461 1 1 1 60 3L 4677908 4677928 CAAATGCTCTACGTCAAGGTG 60 4677950 4677968 CGGCTATAAGCTCCTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fd64A FBgn0004895 FBtr0073192 2 1 1 96 3L 4020565 4020584 GTTCGAACAGGGAAACTACC 58 4020640 4020717 ATTTGAATCCTTTCCCGATTCC 59 NA Drosophila melanogaster 61 Fie FBgn0026592 FBtr0073157 2 1 1 80 3L 3894107 3894179 CAGGAGCCATACCCTATCG 59 3894222 3894241 GAGACTCGGTTAGAATGTGC 58 NA Drosophila melanogaster 61 CG10858 FBgn0035458 FBtr0073190 3 1 1 142 3L 3751225 3753055 TCAATAGCGATTTCCTCTGTG 58 3748736 3748754 CCGACTTCATCTCGAATGC 58 NA Drosophila melanogaster 61 ImpE2 FBgn0001254 FBtr0073141 2 1 1 60 3L 3512447 3512467 AAAGAGGAAGTTAAGGCAGAG 57 3512407 3512428 CTTCTTGAGCAATTGGTTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 2 3 3 132 3L 3328065 3328083 TGGTGATCCTCAACTTCCC 59 3328179 3328264 CCATTCACATCGACCTTGG 58 NA Drosophila melanogaster 61 CG42456 FBgn0259933 FBtr0300240 2 1 1 60 3L 3319895 3320522 CATCGATGAAGGCAATCCC 58 3320544 3320564 CACAATGAAAGCGTACTTCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dro4 FBgn0052282 FBtr0073061 2 1 1 60 3L 3315686 3315704 TCCTAATGGTGGCCAACTC 59 3315728 3315746 GGACCACTGAATCTTCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12009 FBgn0035430 FBtr0073053 1 1 1 80 3L 3296302 3296380 CCATCTTCAGTCAGGAATCG 58 3296421 3296441 CGTAGTATCTGGAGCTATCCT 58 NA Drosophila melanogaster 61 CG12078 FBgn0035426 FBtr0073092 1 1 1 60 3L 3243537 3243557 GGATTTGTCCAATGTTGTGCT 59 3243497 3243515 TTCCGCATTGAAACTGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14964 FBgn0035410 FBtr0073110 1 1 1 96 3L 3176835 3176913 GCTTTGAGGTCTCCAACAC 58 3176757 3176775 CGATTCCAAGCTTTCACCA 58 NA Drosophila melanogaster 61 CG34025 FBgn0054025 FBtr0290083 3 1 1 80 3L 2960644 2960664 GATCTGAGGTATTGCCTTGGA 59 2960524 2960604 ACTCAAATAGTCACGAGAGCA 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776,FBtr0301580,FBtr0072975 3 4 4 162 3L 2925330 2925348 AAGGAGAACGTTCACGAGG 59 2925473 2940796 ATATCACTGCGATAACCCGG 59 NA Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 1 2 2 80 3L 2600894 2600914 GAATTCGCTAAACACATCACC 58 2600954 2601035 GTCTACGATCTTGACCTTCTG 58 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072922 2 1 3 173 3L 2488882 2490993 CCAGACATTAGTGATGTGATGTC 59 2491126 2491144 CGTATTCCGTGTAGTCCGT 59 NA InUTR Drosophila melanogaster 61 CG32305 FBgn0052305 FBtr0301322 3 1 1 80 3L 2251091 2251112 GGAACTGAGTATTATCGAAGCC 58 2251152 2251224 CAGTAAGTGACAGTCCATGG 58 NA Drosophila melanogaster 61 CG11815 FBgn0035299 FBtr0072852 1 1 1 60 3L 1970836 1970860 GGCTATCATCGATTCTCATTTATGG 60 1970800 1970818 GTTCGTCTCGTAACTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mfap1 FBgn0035294 FBtr0072841 3 1 1 132 3L 1942227 1942308 GAACGTGATAACGTCGAACG 59 1942403 1942421 ACTTGTACTTGCCCTTGGT 59 NA Drosophila melanogaster 61 Cpr62Bc FBgn0035281 FBtr0072869 3 1 1 118 3L 1841180 1841772 ATCGATTACCATGCCTACCC 59 1841081 1841100 GAGTAGGATCCCTTGACGAC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 3 1 3 160 3L 1803312 1803435 GACCTAAAGAACGTGGTGC 58 1803555 1805019 ACATCGTAGACTTGACTGATCTC 59 NA Drosophila melanogaster 61 CG33230 FBgn0053230 FBtr0072757 1 1 1 130 3L 1618609 1618858 GCAAGAGTGCAAGCATAGAG 59 1618951 1618969 TCTCGTCAGACTTCTTGGC 60 NA InUTR Drosophila melanogaster 61 CG12105 FBgn0035241 FBtr0072824 2 1 1 60 3L 1614730 1614751 GATGTTTGATAATGAACCCGAG 57 1614691 1614709 GAATGAGAGTGCTTCTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32313 FBgn0052313 FBtr0072830 1 1 1 80 3L 1545216 1545236 AGTATTACAGGTTTACGGCCA 59 1545090 1545175 ATCGCGTTTCCTGTATTCTG 58 NA Drosophila melanogaster 61 CG42554 FBgn0260756 FBtr0301253 3 1 1 167 3L 835862 835947 CTGAACTTGGCTCATTTCCAC 59 836076 836094 ATCGAGGGTCAATGTGTCC 59 NA Drosophila melanogaster 61 MED30 FBgn0035149 FBtr0072558 1 1 1 60 3L 653279 653297 CTACGAGAAGTGCAACGAC 58 653237 653256 GTAGGGAATCAGACTCTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 1 2 2 80 3L 371212 371455 CACCCACATATTACAGTCGC 58 371151 371171 ACCGTCTCGGAAATATACAGG 59 NA Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 3 2 2 95 3L 317318 317337 CTATCCCAGGACTGATTTGC 58 317393 317466 CGTTCTGGCTCAAATAACCTC 59 NA DesignNoJunction Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 2 2 2 81 3L 220439 220522 GTGTACACGTTCATAGAACACG 59 220379 220402 GCCTTACTATAAATGATAGTGCCG 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 2 3 3 93 3L 213968 214042 TATCTCTTGCGGATGGTGAG 59 214098 214116 TTGTCCGACGATATCACGA 58 NA Drosophila melanogaster 61 CG12483 FBgn0040688 FBtr0072540 3 1 1 60 3L 98294 98313 TGTCCTGGATTACTTGGGTG 59 98113 98132 GGTTGATCTGGAACTTGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ir51a FBgn0033997 FBtr0087364 3 1 1 60 2R 11093160 11093179 GGATTTACAACCCATCCCTG 58 11093201 11093220 AAGCCCAGAATACTAAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33370 FBgn0053370 FBtr0086362 1 1 1 60 2R 15647441 15647459 ATACATCGGTTCTCGTCCG 59 15647399 15647417 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2790 FBgn0027599 FBtr0072409 2 1 1 92 2R 20835332 20835351 AAAGAGCGCTTTATCCTACG 58 20835198 20835277 TAAGTTGCGAACCTCTTCG 57 NA Drosophila melanogaster 61 egg FBgn0086908 FBtr0112777 2 1 1 80 2R 20665802 20665874 ACTATGTGCATGAAGTTCCA 57 20665741 20665762 TCTTAACAGCGTAGTATGTCTC 57 NA Drosophila melanogaster 61 CG34214 FBgn0085243 FBtr0112407 1 1 1 80 2R 20553348 20553431 GTTCCTTACATAAATCCTCTGTACC 59 20553292 20553311 CACTTGGATAATCGATCCGG 58 NA Drosophila melanogaster 61 CG13594 FBgn0035041 FBtr0072336 1 1 1 100 2R 20508937 20508955 GAGTTCCGAGCTCTACCAG 59 20508575 20508873 AGTCAAAGTAGCCGCTCTG 59 NA Drosophila melanogaster 61 Ir60d FBgn0259187 FBtr0302288 2 1 1 60 2R 20408406 20408424 TTTCCACAAGTCCCTTCTC 57 20408446 20408466 GTAATAGTACAGTCCGGTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13575 FBgn0034996 FBtr0072264 2 1 1 154 2R 20143121 20143139 CACCCTCTATGTGAACAGC 57 20143257 20143330 CACCAATTGTCCAGAGCTG 58 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 2 2 2 154 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044543 20044566 CCTCATAAGTCCATTTAGGAACAC 59 NA DesignRelaxed Drosophila melanogaster 61 bgcn FBgn0004581 FBtr0072232 3 1 1 85 2R 19741946 19742025 ATGTTCTCGGGACATCCAC 59 19741879 19741898 ATAAAGACGTTCACGTTGCG 59 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301262,FBtr0301263 1 2 2 83 2R 19487211 19487291 TTCCTTAAACTGCAACGGG 58 19487146 19487167 GATGATCTTTGTTGTGACTTCG 58 NA Nonspecific Drosophila melanogaster 61 CG9896 FBgn0034808 FBtr0071988 2 1 1 85 2R 18882462 18882480 CAAGATCTGCGGCAATGAG 59 18882338 18882413 CCTCGCAGTAGATCTTGGT 58 NA Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 2 2 2 80 2R 18801627 18801709 GAGGCATTGGAATACAAGAGC 59 18801751 18801769 ACGTGTCTCGGAAAGATCG 59 NA Drosophila melanogaster 61 CG12490 FBgn0034782 FBtr0302717 1 1 1 80 2R 18722644 18722720 ACTTTCCGGAATACGATTGG 58 18722763 18722781 ATTGGGTCAAGATGTAGCC 57 NA Drosophila melanogaster 61 CG30273 FBgn0050273 FBtr0071866 1 1 1 146 2R 18554819 18554896 GTGATCATACAACATCAAGCTG 57 18555003 18555021 AACGATGCATAGAATGGCG 58 NA Drosophila melanogaster 61 CG13506 FBgn0034723 FBtr0071822 1 1 1 80 2R 18279739 18279823 TAACTGGGTCGTACACTTGG 59 18279863 18279884 TGATCTTCCAGATGTTATCCGT 59 NA Drosophila melanogaster 61 CG30288 FBgn0050288 FBtr0113367 2 1 1 107 2R 17407389 17407408 CAATGTGGACGTGGATAGGA 59 17407234 17407324 CAGATTGGTCTGACATAGTTTGAG 59 NA Drosophila melanogaster 61 CG34115 FBgn0083951 FBtr0110813 1 1 1 98 2R 16864172 16864248 CAGTACTTCGAAAGGCCCA 59 16864308 16864328 GTATTGGTACAATTCCGGTCC 58 NA Drosophila melanogaster 61 otp FBgn0015524 FBtr0110772 2 1 2 176 2R 16774170 16774188 GACAACCAATGTCTTCCGC 59 16772858 16774030 TACATCATGGAGTCGCCTG 59 NA Drosophila melanogaster 61 CG13443 FBgn0034548 FBtr0086239 3 1 1 100 2R 16661259 16661277 TAATCCAGTCTTGTGCCCT 58 16661413 16661433 ATTGTAGGCATAGACATCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 2 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 1 2 2 80 2R 15332874 15333440 GAGATACCATCCCACGTCC 59 15332812 15332833 TATTTCGGTAGAACTGTTGGTG 58 NA Drosophila melanogaster 61 CG30127 FBgn0050127 FBtr0086556 1 1 1 103 2R 15215767 15215785 CACCACCATTAACACGTCC 58 15215556 15215700 AGTTGTCACCCATGTCCAG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 1 2 4 80 2R 15196577 15196597 GACAAGTCGCTTACGAATCTG 59 15196006 15196535 CGTCACGAAGATCACTGTG 58 NA Drosophila melanogaster 61 mip40 FBgn0034430 FBtr0086560 3 1 1 60 2R 15179184 15179204 GGATAAGACTCCTTTGTACCC 57 15179144 15179164 TGGATTCTTGGGTTGATTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 2 2 2 80 2R 14745204 14745225 CAACATTGAAGGAACCTTATCG 57 14744896 14745164 GATCCTCAATAACCTCTGGC 57 NA Drosophila melanogaster 61 CG15073 FBgn0034379 FBtr0086607 1 1 1 80 2R 14594451 14594472 ATAAGAAGTTCTACAAGCGCTC 58 14594510 14594613 ACTGGGTGCATTTAAACTTCTC 59 NA Drosophila melanogaster 61 Rgk2 FBgn0085419 FBtr0112633 1 1 1 111 2R 14433673 14433766 TATCACATCACAGGAGGGC 58 14433841 14433859 CTTCAATATGCCGACGAGC 59 NA Drosophila melanogaster 61 CG30120 FBgn0050120 FBtr0299806 3 1 1 105 2R 14336284 14336302 CAAGGATCCCGAGTTCCTG 59 14336368 14336444 GATATTCAGCTTGTCCTTGCAG 59 NA Nonspecific Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 1 2 2 155 2R 14329811 14331170 TGTTGATTTCTCATGGCGG 58 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 GstE7 FBgn0063493 FBtr0086675 2 1 1 60 2R 14294786 14294807 TAATGCACTGAGAAGCATTACC 58 14294827 14294846 CTTGGGAATCATCGTTTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM23 FBgn0034328 FBtr0086729 1 1 1 65 2R 14270683 14270701 GCCTGATTCTGTCCTTTGC 59 14270572 14270654 TAATCACATTTCCGGCCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30325 FBgn0050325 FBtr0086821 3 1 1 60 2R 13766090 13766108 AAGTCGAAATCAGAGGGCA 59 13766048 13766066 AACTCTGTCTTGGGTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6385 FBgn0034276 FBtr0089560 1 1 1 148 2R 13642247 13642318 GTACCACGATCTCATCGGT 59 13642117 13642135 GATCCCTGTTGGTATTGGC 58 NA Drosophila melanogaster 61 CG6410 FBgn0034265 FBtr0086885 1 1 1 71 2R 13613250 13613268 TGGTTCGGGAGTTCTTCTG 59 13613137 13613215 AAATTGCACGACACTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42561 FBgn0260763 FBtr0301265 2 1 1 82 2R 13572532 13572551 AACTATCGTTCCGCAAATCC 58 13572596 13572673 CCGGATGTTCGATTCTGAG 58 NA Drosophila melanogaster 61 icln FBgn0029079 FBtr0086832 2 1 1 61 2R 13478635 13478653 GCACAGTTTACATTGCCCA 59 13478763 13478782 TATACCCTCCGCCAATTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0086946,FBtr0113090 3 2 2 65 2R 13438859 13438880 GCAATCGGATATTCAGAATCCT 58 13438958 13438976 GGATCTTCTACGGGCTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6568 FBgn0034210 FBtr0086964 2 1 1 80 2R 13294429 13294448 CAACAAAGATGACTGGAGCC 59 13294295 13294386 TGAGAACGGGATATCCCAC 58 NA Drosophila melanogaster 61 Amy-p FBgn0000079 FBtr0087004 1 1 1 193 2R 13007095 13007113 CAAGAACCTGAACACCGAC 58 13006920 13006938 AGTTGGTCAGGTACTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6421 FBgn0025827 FBtr0087043 1 1 1 108 2R 12759787 12759808 GTTATTACTTTAACCAGCCGGA 58 12759876 12759952 TATCCAGCACATGACCTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 2 4 4 91 2R 12746191 12746209 CTCCAGCTCTGACGATAGC 59 12746261 12746344 CAGAAGGATTGTAATCTGAGCC 59 NA Drosophila melanogaster 61 Fen1 FBgn0025832 FBtr0087075 1 1 1 75 2R 12742770 12742788 GCGAAAGTGAGATGAAGCA 58 12742651 12742669 ATGAGGAACTGGTACAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Acp53C14b FBgn0034153 FBtr0087081 3 1 1 80 2R 12636895 12636916 TCAAGTCCATATTTCTGCTCAG 58 12636780 12636799 TTTCACTTATAGTGGCCTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 3 3 3 80 2R 12454486 12455297 GAATTGGAGAAGATCCAGCT 57 12455339 12455358 CAGTAGAATCTTCCCGAACC 57 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 1 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 1 2 5 103 2R 12249021 12249226 TCGAGAAGTACTACTGCGA 57 12249293 12249311 GAGGAACTCGATGATCACG 57 NA Drosophila melanogaster 61 CG4282 FBgn0034114 FBtr0087144 2 1 1 62 2R 12211737 12211817 GCAGGAACTCAAGGAACAC 58 12211842 12211861 CAGTTGGGACAGGTGTAGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30093 FBgn0050093 FBtr0087199 2 1 1 66 2R 11831837 11831855 GTTTCACAATGCCGAGGTG 59 11831885 11831903 TTAATCCTCCTCAGCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 3 3 3 80 2R 11812930 11813011 GTTAATGATCGGCAGCTGG 59 11812868 11812888 GGACTTGAGACCCTTACAGAG 59 NA Drosophila melanogaster 61 CG30083 FBgn0050083 FBtr0300381 1 1 1 110 2R 11599759 11599837 TCAAATACTTGCCGTTCGT 57 11599667 11599691 CCTATATCGTTACTATAACTGCCAG 58 NA Drosophila melanogaster 61 Cdk5 FBgn0013762 FBtr0087350 1 1 1 110 2R 11458466 11458488 GACCTCAAGAAGTACTTTGACAG 59 11458218 11458396 GACATTATGGCTGTGGCAG 59 NA Drosophila melanogaster 61 Ir52d FBgn0050464 FBtr0273344 1 1 1 60 2R 11395287 11395308 TTCGCAGATCTAGAGAATTCCA 59 11395328 11395347 GCATCTCAATATCGTACCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL41 FBgn0034001 FBtr0087400 2 1 1 60 2R 11104763 11104784 AAGCCATACGTGTCCTATAAGG 59 11104724 11104742 GATCCAAGCTGGTGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a17 FBgn0015714 FBtr0087451 3 1 1 176 2R 10762558 10762636 GGTTGTGATGGAAACGCTG 59 10762775 10762794 TTGAATATCTCCGGTTCCGG 59 NA Drosophila melanogaster 61 CG42254 FBgn0259112 FBtr0299540 1 1 1 78 2R 10657913 10657931 GTGGTGTAAACAGCCACTG 59 10657792 10657812 CGGAATCGCTAGTCATATGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ave FBgn0050476 FBtr0087439 1 1 1 80 2R 10640183 10640201 ATGTGCTCAAGTGGTATCG 57 10640245 10640466 TTCCGGTTATATCGTGCTG 57 NA Drosophila melanogaster 61 Oaz FBgn0033939 FBtr0113081 2 1 1 80 2R 10349546 10349567 TAAGAAACTGCATACCAACGAG 58 10349606 10349702 ATCTTCAAGTGGTCACTCCTG 59 NA Drosophila melanogaster 61 CG34443 FBgn0085472 FBtr0112747 3 1 1 106 2R 10255547 10255567 TAGTTACTTTCTTGGCCTGGT 59 10255635 10255710 CAATAGCGGCGAAGATACC 58 NA Drosophila melanogaster 61 mRpL53 FBgn0050481 FBtr0100285 3 1 1 81 2R 9842482 9842500 CAAGCCAGAAATCGTCTGC 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG30484 FBgn0050484 FBtr0087639 2 1 1 60 2R 9735592 9735611 GCACAAGTAATTCGTTCTGG 57 9735632 9735652 TTCTCATAAAGCGAAGTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18369 FBgn0033860 FBtr0087624 1 1 1 60 2R 9485637 9485658 TTCCAATTTCATAGCCAAGCAG 59 9485677 9485697 CCATAAACGATCTCCAGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13334 FBgn0033856 FBtr0087677 3 1 1 60 2R 9446558 9446578 ATTATCATCTCAAATCCCGCC 58 9446597 9446618 GTAGATTGGTTATTCGCTGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cbs FBgn0086757 FBtr0087666 2 1 1 110 2R 9339279 9339297 CGAAAGGCCCTTAAATCCC 58 9339371 9339441 CAGCTTGACCTTATCGTCC 58 NA Drosophila melanogaster 61 CG33470 FBgn0053470 FBtr0087657,FBtr0087656 3 2 2 60 2R 9299580 9299600 CGTTTGTTAACCGAAAGAACG 58 9299681 9299699 AAATTGGGACCACTGATGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG10814 FBgn0033830 FBtr0087720 2 1 1 177 2R 9264310 9264328 ACAATATCTGGAGGGCACC 59 9263852 9263870 TTGAATCTGCAGGAGTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087747 2 1 2 60 2R 9144495 9144513 AAACAACTACGGAGCACAC 58 9144537 9144555 GATCGCACCATCGTATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GLaz FBgn0033799 FBtr0087772 2 1 1 92 2R 9052332 9053942 TTAACATGAGTCGGGTCCT 58 9052258 9052276 CAAACTGAAAGGTGGTGCA 58 NA Drosophila melanogaster 61 Or49b FBgn0028963 FBtr0087781 2 1 1 81 2R 8731007 8731025 GGCAATCTGTTCTTTGGCA 59 8731069 8731192 CAAATGGCAGGACTCTTTCG 59 NA Drosophila melanogaster 61 mos FBgn0033773 FBtr0087865 3 1 1 80 2R 8640216 8640289 TTTACAGAGATCGCTCCGT 58 8640154 8640175 TCAGCAAATGAGACTCATTGTG 59 NA Drosophila melanogaster 61 Cpr49Ah FBgn0033731 FBtr0087924 2 1 1 108 2R 8301571 8301810 AAGTGCTCATACTTCTTGTGC 59 8301880 8301898 TGATCTGGTTTGTCATCGC 58 NA Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 1 1 1 60 2R 8281983 8282001 CTACGTTGTCAGCTCACAC 58 8282022 8282097 AGCCTTGGCTAAATTTGTACTC 59 NA DesignNoJunction Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088013 1 1 3 103 2R 8055699 8061607 GAATAATAAACTCGACCCAGTG 57 8055617 8055635 AAGACGAAGTCGAGATGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 1 2 2 87 2R 8034896 8034914 GAAGAGGAGAACCAGGAGG 58 8034689 8034845 TATCCGATTCATCCTCGCC 59 NA Drosophila melanogaster 61 CG30037 FBgn0050037 FBtr0088049 3 1 1 114 2R 7867882 7867903 ATTATCCTAGCAGTGTTCTTGG 58 7867731 7867749 AATCGGCTACACTTCTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088041 1 1 2 81 2R 7861950 7861969 TTCAACAGTATTGACGAGCA 57 7862011 7862113 GATACTCGCAAGCATAATTGG 57 NA Drosophila melanogaster 61 CG42531 FBgn0260436 FBtr0300859 3 1 1 96 2R 7751947 7752033 CGGAGCTTTAATCAGATCAACTG 59 7752087 7752107 CAGCATGTAGATGCAGTACAC 59 NA Drosophila melanogaster 61 S2P FBgn0033656 FBtr0088063 2 1 1 82 2R 7731327 7731396 CCGCTTCTTCAAGAGTTGC 59 7731263 7731287 GGAGGCTCATGAAATTTATACTCAG 59 NA Drosophila melanogaster 61 pyr FBgn0033649 FBtr0113070 2 1 1 187 2R 7608528 7608546 GTTCCACAAGTTCATGCCC 59 7610267 7611425 TGAAGTATTGATATGTCCGCAG 58 NA Drosophila melanogaster 61 CG13196 FBgn0033645 FBtr0088084 2 1 1 84 2R 7572902 7572920 TAACCCTACACTGCAAGGC 59 7572776 7572855 CGAGCTTGTACATCATTGGC 59 NA Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 2 2 2 80 2R 7511398 7511477 CAGGGAGAAAGTTCCTCCA 58 7511336 7511357 ATCTGGGAGAAGTACAACTGAC 59 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 1 2 2 92 2R 7344227 7344316 TGTTTACCTACCGACTCGAC 59 7344371 7344389 TTAGCATCCGAACAAGCAC 58 NA Drosophila melanogaster 61 sprt FBgn0082585 FBtr0088146 3 1 1 82 2R 7274092 7274179 GGACATCACAGACAACATAGAC 58 7274031 7274051 AGAGCATCTGGAGTTCTTCTC 59 NA Drosophila melanogaster 61 san FBgn0024188 FBtr0088126 2 1 1 80 2R 7248322 7248468 CAGACAACATGACTAGGAGCA 59 7248509 7248528 CGGTGTTGAGCTTCTTTAGC 59 NA InUTR Drosophila melanogaster 61 CG34224 FBgn0085253 FBtr0112417 3 1 1 60 2R 7124971 7124990 CTGGTCGAGATCATTTGTGC 59 7124930 7124949 TTCTGGGATGACATTGTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG30005 FBgn0050005 FBtr0088464 1 1 1 80 2R 5495072 5495091 CAATCGATTCCAGAAGGTGC 59 5495128 5495214 GCGAGATATCTTATAATCGCTATGG 59 NA Drosophila melanogaster 61 unpg FBgn0015561 FBtr0088586 3 1 1 80 2R 5083605 5083623 GCAGTGACATTAGCCTGAC 58 5083665 5086599 AATTGGTATAGGCTCCATTGC 58 NA Drosophila melanogaster 61 CG8197 FBgn0033369 FBtr0088661 2 1 1 120 2R 4948865 4948957 CTCAGCTTGGAAGGAACAC 58 4948763 4948781 AGTTGAACTGTGTCAGGCT 59 NA Drosophila melanogaster 61 CG8193 FBgn0033367 FBtr0088663 3 1 1 155 2R 4930106 4930181 AGAACGACAGGATTGACCAG 59 4929970 4929988 TGAGGAAGTTAACCAGGCG 59 NA Drosophila melanogaster 61 CG8193 FBgn0033367 FBtr0088663 2 1 1 142 2R 4931159 4931177 ATCTACGAGGCCATTCACC 59 4930922 4930998 AGGTCACCATACAGCACTC 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 1 2 2 60 2R 4048432 4048554 TTCCCTGCTAACAGAAGCTC 59 4048391 4048411 ACCAGCAATCAAGGTAAACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842,FBtr0088841 1 2 2 82 2R 3720139 3720219 CAAGGTCAGAGCAATTATACCA 58 3720262 3720280 GTCCGGATCACTCCTATGG 59 NA Nonspecific Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088834 3 1 4 151 2R 3700484 3700790 CCATGGACCTAGAGGATCC 58 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300476,FBtr0088996,FBtr0300481,FBtr0300479,FBtr0300480,FBtr0300478 1 8 8 96 2R 3360841 3361234 TTGACGATACGTTGCAACG 59 3358358 3358376 CAACGCAGCAAATTCTCCA 59 NA Drosophila melanogaster 61 CG11123 FBgn0033169 FBtr0088971 3 1 1 60 2R 3328430 3328449 TCTGGATGCTATGAAAGTGG 57 3328471 3328548 ATTGTTGGCCATGATGACTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cyp6u1 FBgn0033121 FBtr0086185 1 1 1 151 2R 2860416 2860434 TTCTGCCTCTACGAGTTGG 59 2860225 2860301 CGAAGCGTTTCATTGAGGA 58 NA Drosophila melanogaster 61 SdhB FBgn0014028 FBtr0086156 2 1 1 138 2R 2695985 2696004 AACTTCTACGAGCAGTACCG 59 2696161 2696179 ACAGGATGCACTCGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 tomboy40 FBgn0033074 FBtr0085994 1 1 1 60 2R 2113463 2113484 AATTATGGTGAACAAGGGTCTG 58 2113502 2113523 ATTCATGTTAATGGTGTGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 1 2 2 99 2R 1566989 1567070 GTAAATGGTCTTCCGGTGAC 58 1566909 1566927 TCTTGACTCCAGTCAGCTG 59 NA Drosophila melanogaster 61 CG17508 FBgn0039970 FBtr0086071 1 1 1 93 2R 1497678 1497696 TAAGGAATATGGAGCGCCA 58 1497750 1498706 GTTTATGCCACTTGATACAAGC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 3 3 3 103 2R 979973 980042 CGTATTCAGACCAAACCTGG 58 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 CG17883 FBgn0040005 FBtr0111292,FBtr0111291 1 2 2 164 2R 559596 559615 AACACAAAGCATTTCAGCTC 57 559800 559818 CCAACCGTTTCTTGAGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Psi18S-525k FBgn0083028 FBtr0113538 3 1 1 73 2L 5202407 5202431 GAATATACCTTCCCAATTGTGTCTC 59 5202462 5202480 TATTCAGGATGCCGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31940 FBgn0051940 FBtr0077861 1 1 1 60 2L 2010918 2010940 GGTTCTATGGTGTAATGGTTAGC 59 2010880 2010898 AGATTTGAACTCGGATCGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg2 FBgn0063449 FBtr0079906 1 1 1 101 2L 9894336 9894354 GAGCACATGGATTTACCGA 57 9893864 9894075 AACGTCACTCTTATACAGTCG 57 NA Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 3 1 1 156 2L 22443083 22443101 CTAGGAATAGGGTGGGCTG 59 22443220 22443298 TGCTCCATTAATCGATTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111259 2 1 4 80 2L 22431287 22432689 GTGCATGCTTTGAGGTACC 59 22432730 22432751 ATTTCGCAGGTACTATTCTTCC 58 NA InUTR Drosophila melanogaster 61 CG15216 FBgn0032978 FBtr0085940 3 1 1 115 2L 22161310 22161697 ATATCGAAACTTCTCGGCAG 57 22161774 22161793 TTGCTCCTTGGAATAATGCT 57 NA Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942 3 1 2 163 2L 22129887 22130106 AACCACGTACATGGTAACAC 58 22129743 22129761 GGTACTACCAGTAGTCCGC 59 NA InUTR Drosophila melanogaster 61 CG42597 FBgn0260996 FBtr0301799 2 1 1 60 2L 22065020 22065038 AGAGGTAATACCCACGCAC 59 22064978 22064999 GGTCTCAAGGATAAACTTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 1 4 4 80 2L 21388772 21388792 CTTTGCCAGATCATATGCCAG 59 21388831 21388923 CTACATTTGTTTCATTGGGCCT 59 NA Drosophila melanogaster 61 CG12050 FBgn0032915 FBtr0114615 2 1 1 80 2L 21100754 21100775 AATGATCTAGTGAACTTTGCGG 59 21100630 21100719 CGTATTCAGAATGTAACTCTGTAGC 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 2 5 5 83 2L 20355739 20355816 GACGCAAATACTCAGTCAGG 58 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 neb FBgn0004374 FBtr0081332 3 1 1 251 2L 20077178 20077198 GGAAAGTAATTGCTGCTCTCG 59 20087761 20087779 TTACCTTCACCCGGTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081328,FBtr0081329 1 3 3 92 2L 20063529 20063547 CCCTGAGGTGCTGATTACC 59 20063601 20063680 CCACTCAGGCAAGTAAATAGC 59 NA Drosophila melanogaster 61 CG10132 FBgn0032798 FBtr0081247 3 1 1 81 2L 19524104 19524122 GGTAACTATGAGGCAGCAG 57 19524164 19524249 TGAGAGTGACCTTAAACTTTCC 58 NA Drosophila melanogaster 61 Rab9 FBgn0032782 FBtr0081206 2 1 1 90 2L 19433055 19434677 ACTCTGCAGATATGGGACAC 59 19434730 19434748 AGCAGAGCAGACAGATGTC 59 NA Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 2 2 2 80 2L 19419106 19419124 AAACTTCTCCTGCTGTTCC 58 19419165 19419317 CTCTAGGTTATATCGGTTACCC 57 NA Drosophila melanogaster 61 l(2)37Bb FBgn0002021 FBtr0081177 2 1 1 99 2L 19051028 19051108 AAGGATGACACGTATGCCC 59 19050947 19050967 CGGCAAATAGTGACATTTGGA 59 NA Drosophila melanogaster 61 Side FBgn0032741 FBtr0081141 1 1 1 67 2L 19029054 19029072 GGACATCCTGGAGCTAACC 60 19029103 19029309 TGTTAACCGTGGGATCGTC 60 NA DesignRelaxed Drosophila melanogaster 61 robl37BC FBgn0028569 FBtr0081139 2 1 1 262 2L 19011009 19011027 CTGTGCAGATGACCTTCGA 59 19011253 19011271 CAGAATGATCGTGTGCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ham FBgn0045852 FBtr0081123 1 1 1 80 2L 18764900 18764919 CAGGACGATATGAAGCAGGA 59 18764631 18764862 GTCAATGGATTTCCTATCATCCTC 59 NA Drosophila melanogaster 61 Mst36Fb FBgn0261349 FBtr0302267 1 1 1 86 2L 18674269 18674352 GAGTTGTTAAGAAGTGCCCA 58 18674202 18674222 CGTACTGGATCTAATGCTCTC 57 NA Drosophila melanogaster 61 CG31787 FBgn0051787 FBtr0081055 1 1 1 60 2L 18285204 18285222 GCCAGGAAATGTTAACCGA 58 18285162 18285186 ACGTAACTATCGATACCAGTATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 3 2 2 80 2L 17158736 17161864 GGAGTCAACATCGATCTGC 58 17161907 17161926 ATAAAGTCCGGAACTCTGGA 58 NA Drosophila melanogaster 61 CG12620 FBgn0032626 FBtr0080953 3 1 1 60 2L 17087939 17087959 ACTCCGAAGATTTCGAATTCC 58 17087981 17087999 ACGAAGGATATGCGTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4440 FBgn0040984 FBtr0080835 2 1 1 82 2L 16329972 16329992 TCCAGTATCGCTAAAGAAGCT 59 16330095 16330113 GAGGCTATGGCAAACAGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or35a FBgn0028946 FBtr0080781 1 1 1 80 2L 15622529 15622549 TTTGGTTTGGTGCTAAGACAG 59 15622416 15622489 TGAGGGAATCCGTAGTAAAGG 59 NA Drosophila melanogaster 61 l(2)35Cc FBgn0259982 FBtr0080708 2 1 1 142 2L 15256676 15256694 CAGAAGCTCACAGACAAGC 58 15256850 15256869 GTACTCCATGATCTCCTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31832 FBgn0051832 FBtr0080726 2 1 1 60 2L 15031573 15031591 TTTCAAGTGACCCAGTGCA 59 15031531 15031554 CTAGTCGTCTTTGAATGACAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15278 FBgn0032554 FBtr0080683 3 1 1 184 2L 14875657 14875675 GCACACTGGTTCTCTTGTC 58 14875422 14875509 AATCCACTGACTGAGCCAC 59 NA Drosophila melanogaster 61 CG15278 FBgn0032554 FBtr0080683 2 1 1 184 2L 14875656 14875674 CACACTGGTTCTCTTGTCG 58 14875421 14875508 GAATCCACTGACTGAGCCA 59 NA Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 2 2 2 60 2L 14618425 14618446 CATATAGTGCATCCAAATTCGG 57 14618467 14618536 TAAAGAGGGTCCGCTAGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18125 FBgn0028917 FBtr0080642 1 1 1 60 2L 14346379 14346399 AATGGAAGTGTTGTCGATGTG 59 14346339 14346358 CGATGTCGTTTCCTAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 1 2 2 91 2L 13903705 13903789 TCTTTACAGATCCCTCTACACC 58 13903635 13903653 CGATTTCGTGCTGGAACAG 59 NA Drosophila melanogaster 61 CG33642 FBgn0053642 FBtr0091619 3 1 1 117 2L 13530268 13530286 GGATGCATGTCAGTTCCTG 59 13530363 13530445 GTTGAAGTTCGTTCTTAGAGGAC 60 NA Drosophila melanogaster 61 CG9305 FBgn0032512 FBtr0080471 3 1 1 92 2L 13372759 13372778 CATTGGAGATCGAAACCACG 59 13372628 13372706 CATTATCTCCCGTAGTCTCGT 58 NA Drosophila melanogaster 61 Tor FBgn0021796 FBtr0080422 1 1 1 90 2L 13011610 13011628 AGATCTCGAACTGGCAGTG 59 13011680 13011774 AGTAATCACCTGAAGGTTGGT 59 NA Drosophila melanogaster 61 CG16800 FBgn0032462 FBtr0273445 1 1 1 179 2L 12966897 12967107 AGGAGCAGGAAGAAGATCAG 58 12967249 12967267 TGTCGTGGTGACCTTTCTC 59 NA Drosophila melanogaster 61 CG18789 FBgn0042127 FBtr0080315 2 1 1 61 2L 11995169 11995245 GTTAAGCAATATCTCAAAGCCG 58 11995129 11995147 GACAAAGGCCACATCTTGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16965 FBgn0032387 FBtr0080284 1 1 1 80 2L 11982346 11982426 GGATTAACTCTCCAAAGTTCCT 57 11982467 11982485 TGTTGACCACCACAAAGTC 58 NA Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 1 2 2 95 2L 11852015 11852091 TTTAAGCGGTCCTATCCCA 58 11852148 11852168 CTGGCTAAGAAACTCTGAGAG 57 NA Drosophila melanogaster 61 Sfp33A1 FBgn0259962 FBtr0300306 3 1 1 179 2L 11754336 11754414 CATAATAGCCGAGTTGTGCT 58 11754176 11754194 ATTGTCCACGATTCCTTGG 57 NA Drosophila melanogaster 61 CG34162 FBgn0085191 FBtr0302420 2 1 1 82 2L 11533378 11533396 ACTTATGCGATCTTCCTGG 57 11533439 11533518 GAAGATGTTACCATTATGCTGC 58 NA Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 2 2 2 94 2L 11369000 11369736 GATTTATGGGTCTGCATCCG 58 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 RfC38 FBgn0028700 FBtr0080225 3 1 1 81 2L 11129994 11130123 GACTTCCACAAGGATCAAGC 59 11129932 11129950 AGGGTCCGTAGAACATCAG 58 NA Drosophila melanogaster 61 CG7329 FBgn0032271 FBtr0080131 1 1 1 95 2L 10630792 10630879 CCTGAATACGATACAACTACTGG 58 10630719 10630737 ATGCGATGAAGGGTAAGGA 58 NA Drosophila melanogaster 61 CG6138 FBgn0032268 FBtr0080098 3 1 1 61 2L 10567838 10567856 ACCTGTTCACTTGGTATGG 57 10567881 10567899 TAGTTTCACTGTCCGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grip75 FBgn0026431 FBtr0080033 2 1 1 80 2L 10483566 10483586 AAGAAGTTGAGCAGTTTACCC 59 10483625 10483704 AGTAACCATGCAAACTATCTGG 59 NA Drosophila melanogaster 61 CG5168 FBgn0032246 FBtr0080020 3 1 1 83 2L 10424864 10424882 AACTGTCAGCTTTGCTCCA 59 10424928 10425008 ATGATGCTGTCGTATTCCCA 59 NA Drosophila melanogaster 61 RfC3 FBgn0032244 FBtr0080019 3 1 1 82 2L 10419865 10419883 TCGGTTCGCTCCATTATCC 60 10419928 10420007 CCTCAGTTATCTGAACGGCT 60 NA Drosophila melanogaster 61 Ir31a FBgn0051718 FBtr0080015 1 1 1 94 2L 10406430 10406511 CAAGTGTTATCGACAAGGAGG 58 10406567 10406585 TATGAATGCAGCCACTCCA 59 NA Drosophila melanogaster 61 LSm-4 FBgn0067622 FBtr0091657 1 1 1 80 2L 10403552 10403745 TATTTGCACCTCAAAGGATGG 58 10403492 10403511 CGCAGATATTTGATGGTGCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5045 FBgn0032229 FBtr0080000 3 1 1 109 2L 10356949 10357022 TTAGTTCAGTACAATGTGGCG 58 10357092 10357111 TGAGAATATGTCGTAGGCCC 59 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 3 2 2 107 2L 10241770 10241853 CGGTCATTTGGGTATTGCT 58 10241924 10241942 ATGACCTTCGGAATAGGCT 58 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079952 2 1 2 83 2L 10232588 10232606 TTGGACAAATTCTGGGCTG 58 10232653 10233492 GCGATCAGTTACCTTCTGG 58 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079950 2 1 2 138 2L 10222938 10222956 CTGAAGCGCACGTAAACAG 60 10223057 10223157 GGGCAAAGTCATCTTGTCTG 59 NA InUTR Drosophila melanogaster 61 CG13136 FBgn0032186 FBtr0079965 1 1 1 60 2L 10136956 10136974 TACCTGACCCAGTTGTACG 58 10136914 10136934 CCGAGTAGTACATGTACTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 1 2 2 87 2L 10011895 10012404 GATTCCAAAGCTGGAACGC 59 10012449 10012473 GGACTTCACTTGAACTGATTATCTC 59 NA Drosophila melanogaster 61 Dref FBgn0015664 FBtr0079889 3 1 1 80 2L 9965304 9965383 CTCTGGTGATTGCTTTGGAC 59 9965243 9965264 GAATCTTTGAAGTGATTGGCGA 59 NA Drosophila melanogaster 61 CG13126 FBgn0032168 FBtr0079892 3 1 1 92 2L 9952819 9952837 TCAAAGCATGCCATCTGTC 58 9952686 9952764 AGAATAGGCAGACTTTCCGT 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079916,FBtr0079912,FBtr0079914,FBtr0079915 3 5 6 90 2L 9809284 9809303 CAAGATAGACATCACGTGGT 57 9807949 9809234 CAAATCCAACTGATTTCCATCG 58 NA Drosophila melanogaster 61 Taf11 FBgn0011291 FBtr0079924 1 1 1 107 2L 9762836 9762916 GAACGAATGCAGGTTCTCG 59 9762747 9762765 TTGCATTAGACGCTTGACG 59 NA Drosophila melanogaster 61 Cyp4e3 FBgn0015035 FBtr0079925 3 1 1 80 2L 9749082 9749164 CCAGGCATTCAGAGATATGTG 58 9749022 9749042 AAACTAAACACGCGATTGGAG 59 NA Drosophila melanogaster 61 CG4382 FBgn0032132 FBtr0114535 2 1 1 81 2L 9599904 9599980 GATTGCCTTAAAGGGAAACAC 57 9599843 9599861 TCAAGGGATTGTTCCTGTC 57 NA Drosophila melanogaster 61 lectin-30A FBgn0040097 FBtr0079816 1 1 1 60 2L 9254775 9254793 GGCTTCTCGTGATGTTCTC 58 9254733 9254753 AGCCACTTGATCAATTAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0301855 3 1 5 144 2L 9257194 9291061 ACTCTTGTGTCTGAATGCG 58 9291167 9291187 CGGTATTTCTGTGGTTTACGA 58 NA InUTR Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 3 4 4 80 2L 9154697 9154715 GACAGGACCCATTAAACGC 58 9154759 9156509 AGCACAAAGTATCGCTCCT 59 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 3 3 3 81 2L 8938685 8938704 ATTCATTCTGATCGCAGTGG 58 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 CG13087 FBgn0032045 FBtr0079675 3 1 1 124 2L 8476702 8476816 GCAGTCAGTTCCACAACAC 59 8476903 8476922 GTCCTGTTCGACTTGAAGTC 58 NA Drosophila melanogaster 61 CG7781 FBgn0032021 FBtr0079609 3 1 1 60 2L 8324984 8325004 ATCTATGTGATTAGTGCGCTG 58 8322933 8324963 ACTTGATGGCATATCCTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7806 FBgn0032018 FBtr0079600 1 1 1 80 2L 8311925 8312395 TCACAGCGGTTTCCTACTG 60 8312437 8312457 AGCCAAACGACATTGATTAGC 60 NA Drosophila melanogaster 61 CG8349 FBgn0032003 FBtr0079594 3 1 1 254 2L 8216330 8216407 GTTCTGTGCTGTTGGTGAG 59 8216625 8216643 GGGTGATAGGCTACCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 Ssb-c31a FBgn0015299 FBtr0079590 2 1 1 102 2L 8211493 8211569 TCCAGATGATCGTATCAAGCC 60 8211633 8211651 GGTCCAAGATGTAGCACCA 59 NA Drosophila melanogaster 61 Rack1 FBgn0020618 FBtr0079565 3 1 1 172 2L 7827199 7827217 TTTGGACGTGTTTCCTTCG 58 7826966 7827063 ACGATCAGGGTCTTGTCAC 59 NA InUTR Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 2 2 2 86 2L 7797721 7798170 ACTCTACGTTCTACGTTGCC 59 7797654 7797672 AGCAATCAGTGGGACTGAG 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511,FBtr0079513,FBtr0079512,FBtr0079510,FBtr0079514 2 5 5 80 2L 7695967 7696041 TTCCGTAAAGCGAGGTGAG 59 7695905 7695924 ACTACATCTGCATCAAGGGT 58 NA Drosophila melanogaster 61 CG31630 FBgn0051630 FBtr0079400 2 1 1 165 2L 7042484 7046262 AAACTGAATTGCACTGCTG 57 7046391 7046409 TTTGCTGTACGTACATCGT 57 NA InUTR Drosophila melanogaster 61 Pcp FBgn0003046 FBtr0079388 2 1 1 62 2L 7021726 7021815 TGTGAACTTCATCGTTGCG 59 7021841 7021859 TCCGGAATGTAGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 SA FBgn0020616 FBtr0079349 1 1 1 80 2L 6950980 6951057 CCTATTGCTAGCATTGTTGACC 60 6951098 6951116 AAACTGCATCAGTGCAACC 59 NA Drosophila melanogaster 61 Rat1 FBgn0031868 FBtr0079345 1 1 1 60 2L 6909272 6909292 CAAGAAGTGCGTTTACAAGAC 58 6909312 6909332 GTCAAGATTTACATCTCCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079379 3 1 2 113 2L 6800099 6800170 ACACATTTGTGGCTTCTAAGC 59 6800006 6800024 TCCGATCGAGTTGCTAACC 59 NA InUTR Drosophila melanogaster 61 Oatp26F FBgn0051634 FBtr0079327 2 1 1 90 2L 6627591 6628523 TTACTTGGGCATCTACTACAC 57 6627521 6627541 CCAATCCGTATAGATGAGCAG 58 NA Drosophila melanogaster 61 CG16947 FBgn0031816 FBtr0079271 3 1 1 80 2L 6460477 6460571 GCGTGAGATTTGGTAAGTACAC 59 6460418 6460438 ATCCATGACAATGGTACTGCT 59 NA Drosophila melanogaster 61 CG13982 FBgn0031811 FBtr0079256 2 1 1 176 2L 6412697 6412715 CTTCTCCATGGGTTCATGC 58 6412854 6413195 GATCTGTTCTTTCGCCAGAG 58 NA InUTR Drosophila melanogaster 61 CG9497 FBgn0031800 FBtr0079283 1 1 1 80 2L 6347832 6347853 TCACCTATTACGAAGTGCTACC 59 6347615 6347795 GGTAGTGATAAAGTTTAGGTCCG 58 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 3 3 3 84 2L 6325593 6325723 GAGCATGGATAGTCTTACCGT 59 6325769 6325787 TTCCACATCTTCCTCGCTG 59 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 1 2 2 95 2L 6273043 6273061 GATTTGGAATGGGCACAGC 59 6273120 6278690 GTTTGCAGGTTCCGATTGG 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079196,FBtr0079197 3 3 3 99 2L 6122100 6122118 TACTCAGACCAAGGAGCAG 58 6122179 6122272 GGCATGGATCTTTAGCTTCTC 58 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 2 2 2 137 2L 6051897 6051915 AAGACTCCAGGTCAGATGC 59 6052012 6052091 CACATATCGGTACTTCTCTTCTG 58 NA Drosophila melanogaster 61 Tsp26A FBgn0031760 FBtr0113024 3 1 1 110 2L 6000735 6000813 CAAGGGCTGGATCAAAGAC 58 6000887 6000905 AACCAATCCTCCTGGATCC 58 NA Drosophila melanogaster 61 Tsp26A FBgn0031760 FBtr0113024 2 1 1 109 2L 6000736 6000814 AAGGGCTGGATCAAAGACC 59 6000887 6000905 AACCAATCCTCCTGGATCC 58 NA Drosophila melanogaster 61 CG13999 FBgn0031753 FBtr0079150 3 1 1 119 2L 5956030 5956108 GCCATAATTCTCTTTGTCACTC 57 5955932 5955950 ATTCCGCAGGATTATGTGC 58 NA Drosophila melanogaster 61 CG31915 FBgn0051915 FBtr0079099 1 1 1 95 2L 5528435 5528526 AATAGCAATTTGGTTGCGC 58 5528585 5528603 ACGCTGTGATAAAGATCCC 57 NA Drosophila melanogaster 61 CG31648 FBgn0051648 FBtr0079098 1 1 1 60 2L 5527417 5527435 GACATTGGATCCTCGATGC 58 5527456 5527477 GAGCTACTTTGATCTCGTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotM FBgn0031701 FBtr0079073 1 1 1 118 2L 5329905 5329980 TATTTGAGCTGCCTTATGGT 57 5330060 5330079 ACCGAAGAATCACCATACAC 57 NA Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 2 4 5 112 2L 5277019 5277037 TACGAGTTATCCGTCACGG 59 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 Cyp4ac2 FBgn0031694 FBtr0300456 2 1 1 94 2L 5266816 5266837 GCAAAGTTCCAAGCTTATTACC 58 5266892 5266969 GCCATTTCTGATCTGTGCT 58 NA Drosophila melanogaster 61 betaggt-I FBgn0015000 FBtr0078991 2 1 1 110 2L 4946003 4946078 GATAACACCAGGAGCACCA 59 4946148 4946170 GTAGATCCAGTCAATGATGTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG34177 FBgn0085206 FBtr0112368 1 1 1 84 2L 4433987 4434006 GCTATGCTCCTATGGATCCT 58 4434053 4434129 ACTTACCAGGATGGTTCGG 59 NA Nonspecific Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 3 1 1 129 2L 4227733 4228013 GTTGCACGTTTCCTCTGTG 59 4228104 4228124 CCTTATCCTGGATCTTAGCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301,FBtr0077508 2 2 2 80 2L 3929495 3929786 TCCAATGATAACCTGGTACCG 59 3929435 3929453 TAGTGGTTCTTCGATCCGC 59 NA Drosophila melanogaster 61 CG31772 FBgn0051772 FBtr0077489 3 1 1 80 2L 3762494 3762512 GGAAGAACCTACTGCTGCA 59 3762556 3762627 AGGTGGGACTTTGTTCCTC 59 NA Drosophila melanogaster 61 lectin-24A FBgn0040104 FBtr0077539 1 1 1 60 2L 3717570 3717589 AGTATGTTGCTATCCACCAG 57 3717529 3717549 GCTTCGTTCGCTAATATTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2772 FBgn0031533 FBtr0077516 2 1 1 80 2L 3447081 3447153 CTTAACCAGACTCTGCTCC 57 3447196 3447215 CTGAATGTAGTGAATGGCCT 58 NA Drosophila melanogaster 61 CG12400 FBgn0031505 FBtr0077617 1 1 1 98 2L 3145368 3145387 GAAGAGGAACGAGTACCTGG 59 3145234 3145307 CCATAGGTCTTGCGTTCCT 59 NA Drosophila melanogaster 61 CG31950 FBgn0051950 FBtr0077630 3 1 1 78 2L 2878691 2878709 GAACGATGCCAGTTTGACG 59 2878751 2878769 GTCCGTAATCACGATCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 3 3 3 109 2L 2866729 2866819 TCTGGAAGACCAAGGTTCC 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 CG3117 FBgn0031471 FBtr0300356 1 1 1 81 2L 2846928 2847019 AGTCAAATGTGATAGGCATGAG 58 2846868 2846888 AGGGCATTTGGATAACTTGTC 58 NA Drosophila melanogaster 61 CG2964 FBgn0031462 FBtr0077722 2 1 1 125 2L 2814062 2814080 AATGTCCGTGTGGTCTACG 59 2814168 2814250 TTTCTTATCAGCAGGCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9879 FBgn0031444 FBtr0077700 2 1 1 88 2L 2665162 2665180 GGTTTAAGGCGCTAAACCA 58 2665289 2665307 TTTAGCTGACGTCCCTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Or23a FBgn0026395 FBtr0077698 3 1 1 93 2L 2654776 2654800 GAAATCGGATATGGTTACAAGACTC 59 2654848 2654920 CATCGAGTAATCTATACAGCGC 59 NA Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 1 2 2 80 2L 2144041 2144126 AAGCTATACTACAAGCAGCGT 59 2143981 2144003 GTTTAGCTCTGTGATAAGCTTGG 59 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 1 4 4 81 2L 1694370 1694388 ATGTACAAAGGCGAGGTCC 59 1694432 1694556 GACCTTTGACCTGCAAACTC 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 1 6 6 153 X 19417822 19417840 CACAAACACGATCTGGAGC 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 2 9 9 80 X 16273082 16273101 CCATTTGGTTATGCATGAGC 57 16273142 16273230 AAGGCACATTTGTTATCCTCC 58 NA Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075,FBtr0100271 1 2 2 113 X 15362476 15362558 ATCACGGATTCCTGTCTGC 59 15362381 15362399 GTGCAGGTGATGGTAATGC 59 NA InUTR Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 2 4 4 81 X 9674917 9675201 GCCCATGATATTGAGGCCT 59 9675246 9675264 CCTTGTCCGAAAGGTTCAC 58 NA Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632,FBtr0070633,FBtr0070631 1 3 3 80 X 3759154 3759172 CGCTGGTGTATAGCCTAGG 59 3759036 3759110 CGGTCACAGCTTTAGTTGG 58 NA Drosophila melanogaster 61 CecC FBgn0000279 FBtr0085616 3 1 1 129 3R 26042383 26042470 CTTGGCAAGAGAATCGAGC 59 26042560 26042581 TCCTTTGATGGACATTAAAGGC 59 NA InUTR Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 1 2 2 80 3R 22769168 22769189 CAAACCTGGTCTCAACTATCTG 58 22769228 22769310 ATGAATTTCATGAAGGCCCTG 59 NA Drosophila melanogaster 61 CG13634 FBgn0039224 FBtr0084742 1 1 1 202 3R 20615465 20615483 TTGGCTGTACTTTCTGCTG 58 20615229 20615249 AACTGTGGTACAACTGGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 2 2 2 88 3R 19821616 19821635 CTATTTAAGTCGCGTCTGCC 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 Tpl94D FBgn0051281 FBtr0084339 3 1 1 82 3R 18792267 18792356 TCGATATGCTAACATGAAGGAC 58 18792396 18792417 TAGTAATCTTTCTACGAGCAGC 57 NA Drosophila melanogaster 61 CG5250 FBgn0038691 FBtr0083743 3 1 1 60 3R 15054297 15054317 GGACATTCAGTTCGACTACCA 59 15054257 15054275 GGAGGTGAAGAGCTCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dlc90F FBgn0024432 FBtr0083575 3 1 1 70 3R 14125385 14125403 GCTACTGGAACAACGACAC 58 14125437 14125455 AACGATGCAGTACATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7146 FBgn0038593 FBtr0083601 2 1 1 82 3R 14098801 14098875 ATTGAGCTGACGCAAATCTC 59 14098738 14098757 TCTTTCGCATAGAGCATGTG 58 NA Drosophila melanogaster 61 CG3837 FBgn0038279 FBtr0083004 2 1 1 80 3R 10745142 10745240 TTCCCTTAAACACAACAGACC 58 10745282 10745300 GAGTTCCGGATGAACTCGA 59 NA Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 2 2 2 81 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361494 7361512 AGGTGAGATTGATGTCGCT 58 NA Drosophila melanogaster 61 CG40045 FBgn0058045 FBtr0111163 2 1 1 112 3L 24023858 24023879 TAAACAAGAATCCAGTGGAAGG 58 24023951 24028544 GAATCCTCCTTCGTACAGTG 57 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 2 3 3 62 3L 4262984 4263002 AATGAATCCCTTGATCGGG 57 4263028 4263046 CAGGACCTTCCAATCATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13930 FBgn0035256 FBtr0072803 1 1 1 111 3L 1670677 1670751 CACCTTCAAATTCACCCACTG 59 1670586 1670604 CTTGTACTGAAAGTGCGGC 59 NA Drosophila melanogaster 61 Bro FBgn0013755 FBtr0072760 2 1 1 62 3L 1648247 1648265 CAGGATTGCGATTTCGAGC 59 1648288 1648309 GTTCATGATGAAACTAGAACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl4 FBgn0034219 FBtr0086957 3 1 1 101 2R 13333412 13333489 GATCTACACTGGCGATATGAC 58 13333331 13333349 ATGTAAATCGCCGAAAGGA 57 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298 3 1 7 80 2R 13249532 13249551 TGGCATTCCAGTTTATCAGC 58 13249593 13250263 AGACTATCGCATGAGACTGG 59 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147,FBtr0087149,FBtr0087148,FBtr0087145,FBtr0087146 1 5 5 60 2R 12227858 12227877 TTTAATACCGCTACCCTGGA 58 12227900 12227918 TCATGAAGGCCTTCTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517,FBtr0080518 1 2 2 60 2L 13448671 13448689 GCCAAGCAATCTCATACCC 58 13448629 13448647 TCTTAGCCAAAGTGAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TTLL3B FBgn0031853 FBtr0300056 3 1 1 84 2L 6734567 6734658 AGAAGTACATAGAGCGACCC 59 6734704 6734723 TTAGTGTCCGTGATGGTCAG 60 NA Drosophila melanogaster 61 CG10908 FBgn0031376 FBtr0077813 3 1 1 94 2L 1974397 1974415 CATGACGTCACTGTTCGTC 59 1974473 1974574 CCAGTTTGGAGCTGTACTG 58 NA Drosophila melanogaster 61 CG12506 FBgn0031276 FBtr0078003 2 1 1 68 2L 773845 773864 CCAACAGTACCACAACTTCG 59 773895 773913 AAGAGGAAACCTCTGTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2839 FBgn0031273 FBtr0077999 3 1 1 60 2L 626069 626089 CCAGAAATGTTTCGTCAAAGG 58 626110 626129 AACCGTGAACCTACTTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpLP1 FBgn0002593 FBtr0078056 1 1 1 109 2L 420050 420068 CAGTGATTAGCCACAGCAC 58 420141 420304 TGATCTTCTCACCGGTGAC 59 NA InUTR Drosophila melanogaster 61 CG13690 FBgn0031252 FBtr0078090 3 1 1 60 2L 418896 418914 AGTTACCCGTGATCATGCC 59 418854 418872 GTCCTTAATGACCAAGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4901 FBgn0032194 FBtr0079947 1 1 1 80 2L 10212336 10212355 GTTGATATTCCTAACCGGGC 59 10212398 10212481 CCAGTCGTGTCAATCTTGG 59 NA Drosophila melanogaster 61 CG14362 FBgn0038186 FBtr0082881 2 1 1 80 3R 9681131 9681151 GAAGTTCTCCTCGTATCCCTC 59 9681015 9681092 ATCTGACTACGACTTAGTGCTG 59 NA Drosophila melanogaster 61 Glut3 FBgn0015230 FBtr0083340 3 1 1 60 3R 12615371 12615389 CTTCTTCGTCATCTGCTGG 58 12615413 12615431 CAGAAACAGGTAAGGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst36Fb FBgn0261349 FBtr0302267 3 1 1 88 2L 18674270 18674353 GGAGTTGTTAAGAAGTGCCC 58 18674201 18674222 ACGTACTGGATCTAATGCTCTC 59 NA Drosophila melanogaster 61 Ipod FBgn0030187 FBtr0071484 3 1 1 113 X 10126246 10126336 TGAAATGAAGGTCTTCATCTGC 59 10126154 10126172 GTGGTCTTGCTACCTCCTC 59 NA InUTR Drosophila melanogaster 61 Pros28.1A FBgn0017557 FBtr0083928 2 1 1 60 3R 16574332 16574354 CGGTATATCGTGTCTAATAGGAG 57 16574294 16574313 GGTATGAAAGAGACGTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 3 1 1 175 3R 5639948 5639966 TCCATGGATAACCATGGGC 59 5640104 5640188 CAAACAGGAAGTGAACTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG4302 FBgn0027073 FBtr0071625 2 1 1 87 2R 17101864 17101940 GGCCAGAAATTAAGGAGATGAC 59 17101798 17101816 ACATTGACCATTCGCAGGA 59 NA Drosophila melanogaster 61 mira FBgn0021776 FBtr0083847,FBtr0083848 1 2 2 60 3R 15758830 15758848 GCTGACTTTGACCAACACC 59 15758788 15758806 GGACTTCTTTAGACGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072781 1 1 3 83 3L 1798916 1799023 AGGAGAGGTTTAGGACAAAGTG 60 1799067 1799085 CTCTATCCCACTTCCGCTG 60 NA InUTR Drosophila melanogaster 61 PH4alphaSG1 FBgn0051014 FBtr0085686 3 1 1 87 3R 26329652 26329671 TACAATCTGCACAGTTCCAC 58 26329530 26329605 CATTGCAAATCCACTTTGATCC 58 NA Drosophila melanogaster 61 Su(P) FBgn0004465 FBtr0075359 3 1 1 97 3L 16604061 16604079 AGTCTGGCTGATCTATCGG 58 16603920 16604000 AACCATTTACCGATGCTGG 58 NA Drosophila melanogaster 61 Jhedup FBgn0034076 FBtr0087222 3 1 1 81 2R 12004990 12005065 TCTACAGACCGAAGAATCGC 59 12005108 12005127 GCAGATCCGCTAAAGAAACC 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 2 6 6 80 3R 9204502 9204740 TTGCCCTACATCTACAATCCT 58 9204442 9204462 GTCCAGTTCACTTACATCGTC 58 NA Drosophila melanogaster 61 mst FBgn0020272 FBtr0077211 1 1 1 60 X 21260075 21260093 GGAACGTACGCGAATTACG 59 21260117 21260190 ACCTAAAGTTGGCCTCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077243 3 1 2 124 X 20914315 20914713 GTTTCAAGACGAAGACCTTCG 59 20914799 20914817 CAGGATGTTCTCCAGGTCG 59 NA Nonspecific Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 1 2 2 106 X 20127881 20127899 AGAGCCTGTGTTCTTCGAC 59 20127050 20127812 CATAGCCACCATTGATCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 2 2 2 80 X 19750013 19750132 ACATGGATAAACAGCGTCAC 58 19750173 19750193 CATGGAACAGATGGTAAATGC 57 NA Drosophila melanogaster 61 CG8316 FBgn0030852 FBtr0074485 1 1 1 86 X 17525844 17525926 TCGAGGAGCAGATTGTAGG 58 17525776 17525794 TATCCTCCACTACCAAGGC 58 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 3 3 3 80 X 17466487 17466567 TGCTGAAATGAATCTCTTCCC 58 17466427 17466448 CTAGAACTGGTTCCAGAATACC 58 NA Drosophila melanogaster 61 Pp1-13C FBgn0003132 FBtr0074017 3 1 1 114 X 15254904 15254922 ACGACTGCTAGTACAGCAC 59 15254739 15254829 GGACAAATTCTCGCTTCTTCTC 59 NA InUTR Drosophila melanogaster 61 gce FBgn0030627 FBtr0074004 1 1 1 86 X 15209273 15209370 ATTGAAGCATGCCTTTGGC 59 15209420 15209438 AGAAAGAAGCTGTCCAGCA 59 NA Drosophila melanogaster 61 CG5334 FBgn0030577 FBtr0073935 3 1 1 60 X 14669464 14669483 TTATGCCGATACTCACACGA 59 14669506 14669524 TGTTTGATATCTGCGGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32606 FBgn0052606 FBtr0073888 1 1 1 60 X 13808923 13808942 GATGACAATTTGCTGTTGCT 57 13808882 13808901 CAGCAACAACTTTGCAACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ndc80 FBgn0030500 FBtr0073850 3 1 1 68 X 13505376 13505396 ACCATGTCGAGGATATTACCA 58 13505260 13505346 GCCATGATTTGTTCACCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 84 X 13268351 13268369 CCATGGAATATGCCGTTCG 59 13268417 13271907 AATGGCTTCTTGACACCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 1 2 2 80 X 12706249 12706268 GTCTACAAGCACTACAACGA 57 12701247 12706208 CGTTATGGCATACATCATCTG 57 NA Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073568,FBtr0073567 1 2 2 106 X 11763680 11763779 GTACATAAGTCGCTCTGCG 58 11763849 11763867 TTCTGCAATGTCATTCCGC 59 NA Drosophila melanogaster 61 Ir10a FBgn0083979 FBtr0113487 3 1 1 67 X 11204525 11204544 ATTTCACCATGCTACTGCAG 58 11203600 11203618 GTAGCTTCCATTCGCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 3 2 2 93 X 10806371 10806551 ACATACACAGTCCCAAATACC 57 10806606 10806624 TTCTTCAGACTGCTGTCCT 58 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 3 3 3 82 X 10373677 10373695 CCTGAAGTACTTGTTCCGC 58 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 CG17446 FBgn0030121 FBtr0071327 3 1 1 89 X 9166630 9166710 CAGGTTCATGATAGGCTGC 58 9166559 9166579 TGTTTGATGTGTTTAGCCTCC 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 2 5 5 80 X 8408692 8409227 TCTGCATAAGTGGTCTGGG 59 8409270 8409289 TGATCGGTTGAAACACTACG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 CG1409 FBgn0029964 FBtr0273372 1 1 1 60 X 7752459 7752478 TCGATGTGAGTGACCTTACC 59 7752500 7752519 CGAAACAAGTGCTGGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0070731 2 1 2 81 X 4692533 4692611 AACCACAGAATACATCGACGA 59 4692472 4692490 TGAAAGTTTGGCTCCTGGT 59 NA Drosophila melanogaster 61 CG3081 FBgn0025613 FBtr0070693 1 1 1 68 X 4534805 4534823 CGGGCAAGGATCTAATCTC 57 4534755 4534773 ATACGGATACGGGATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14269 FBgn0029658 FBtr0070532 2 1 1 60 X 3329189 3329210 TACTACTGGAAGGGATTAGGTG 58 3329150 3329169 GTAGGACAAACATGGAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10260 FBgn0040335 FBtr0070443 1 1 1 86 X 2526237 2526255 TATTTGGCACGATTCCGTG 58 2526304 2526385 CTGGGAGTTCGGATTATTGG 58 NA Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293,FBtr0070294 2 2 2 130 X 1368734 1368752 CAGTTCATCTCCACTGTGG 57 1368458 1368476 GTGGTTAGTGAACGGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 2 3 3 81 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986981 26986999 CGATGAGTTTGTCGAGCAG 59 NA Drosophila melanogaster 61 CG15549 FBgn0039810 FBtr0085752 2 1 1 61 3R 26762130 26762148 TCTGGCCCAAATTATCCCT 58 26762087 26762105 TGGGATCTGAGCAGTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CecA1 FBgn0000276 FBtr0085612 2 1 1 108 3R 26036721 26036739 ATTGGACAATCGGAAGCTG 58 26036872 26036890 CTTGTTGAGCGATTCCCAG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 2 2 2 129 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763338 25763358 ATGTATTCATCCGTGTTCCTG 58 NA Drosophila melanogaster 61 Brd8 FBgn0039654 FBtr0085394 2 1 1 60 3R 25050673 25050694 ATGACTCCAACGACAATATACC 58 25050714 25050733 CCACGATCCTTACTCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085358,FBtr0085357 2 2 2 60 3R 24860879 24860897 ATTACGCCTTTGAACGCTG 59 24860921 24860939 CCACCTTGACGATCTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12413 FBgn0039588 FBtr0085293 3 1 1 172 3R 24369996 24370085 GTCACTGGATGATGTTCAAGAG 59 24369845 24369863 GTTCCTTCTGCTCATCTGC 58 NA Drosophila melanogaster 61 eater FBgn0243514 FBtr0301115 2 1 1 80 3R 22925217 22925294 AAGGAACTGCTGTGAACGT 59 22925155 22925173 CAAGACATCTGAGTGCGGA 59 NA Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085059 3 1 2 147 3R 22652406 22663446 AGTTCTGAGCAAGTGAACC 57 22663557 22663575 TATGCTCATCTCACTGCAC 57 NA InUTR Drosophila melanogaster 61 TwdlO FBgn0039438 FBtr0085054 3 1 1 60 3R 22452229 22452251 GAACTGAACAAGGAGTACTACAC 58 22452191 22452209 CCAGAGGATCCTCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978,FBtr0084977 2 2 2 95 3R 21877247 21877319 AAGCATGATAAGCGCTTGG 59 21877170 21877188 AATGGCATTCTTAACGCCA 58 NA Drosophila melanogaster 61 malpha FBgn0002732 FBtr0084956 3 1 1 60 3R 21836822 21836840 AGAATCCGTCGACAATCTG 57 21836863 21836882 ATCGATCTCGGCATAGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14540 FBgn0039398 FBtr0084948 1 1 1 92 3R 21786243 21786261 AAATCGAAAGGTTCTCGGG 57 21786315 21786402 CACCGAAGTAAATTACCTTGC 57 NA Drosophila melanogaster 61 CG5053 FBgn0039352 FBtr0084898 3 1 1 90 3R 21489961 21490041 AGACCAATAGGCAAACTGTG 58 21490094 21490112 GTGTCAGTGTTGTGCAGAG 59 NA Drosophila melanogaster 61 CG31300 FBgn0051300 FBtr0084824 3 1 1 96 3R 21109889 21109907 GGTTGCTCAGGAAGAACTC 58 21109965 21110046 CTTTAGGAAGTCAGGTTGCTC 58 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0084762 1 1 3 85 3R 20875600 20875618 TATTTGTTTCGCAGCGGTC 59 20875665 20876919 CACGTTGACAACATTTACCCA 59 NA InUTR Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 3 2 2 110 3R 19585009 19585091 CTCATGATGAAGAACGGATGG 58 19585163 19585181 GTAGAATAACCGGAGGGCA 58 NA Drosophila melanogaster 61 CG10225 FBgn0039110 FBtr0084468 1 1 1 124 3R 19578285 19578432 AATAATGAAGCGTCAGTCGA 57 19578180 19578198 GAACTATTGTTGGAGCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5391 FBgn0038943 FBtr0084242 3 1 1 93 3R 18159404 18159704 ACACAAATGATCCTGCTGAG 58 18159330 18159348 ATGTTCCCAGGTCTTTGGT 58 NA Drosophila melanogaster 61 CG7080 FBgn0038941 FBtr0084203 3 1 1 75 3R 18155100 18155119 TATGGCTGTTAGTCTCGACG 59 18155226 18155244 ACGAAAGGAGTCTGTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13858 FBgn0040585 FBtr0084243 3 1 1 71 3R 18144560 18144578 AGCTAGTGGAGCTAGTGGT 59 18144507 18144525 AAGGAGACCTTGTTCAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 2 3 3 107 3R 16526041 16526324 GTCTTCAAGGTTTGGATATTCG 57 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 3 5 5 114 3R 14133262 14133280 TCTTCGTCCACGACTACAG 58 14132725 14133184 GGATACAGGATGGGACTGG 59 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083612 2 1 3 281 3R 14025011 14025029 TCGAATACACGGACAAAGC 58 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14892 FBgn0038447 FBtr0083327 3 1 1 164 3R 12421558 12421576 AGGATCATTGCTGGAGCTG 59 12421701 12421783 AAAGAGATCGTTGTGAACACAG 59 NA Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 3 1 1 90 3R 11672741 11672762 GTACGATGTAATGAAGAACGAC 57 11672813 11672895 TTTGATTTGTCCGCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093,FBtr0083092 2 2 2 60 3R 11187714 11187733 TGACATTACCATCGAGTCCA 58 11187756 11187774 CTTACGCGAGTCAATGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-Vb FBgn0038092 FBtr0082684 3 1 1 94 3R 8759111 8759133 GCTTTAATGACTTCGTAGAGGTC 59 8759182 8759264 CAGAGAAACCTTTATCCCATTGAC 59 NA Drosophila melanogaster 61 Su(fu) FBgn0005355 FBtr0082665 1 1 1 60 3R 8516969 8516987 CAACTATCCCGGAGATGTG 57 8516927 8516946 TCCGAAACTAATGTAGTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4830 FBgn0037996 FBtr0082625 1 1 1 80 3R 8035483 8035615 CGAGGAATCTACTCTTAAGCA 57 8035423 8035441 AGTTTGTCGTAGTGATCGG 57 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 2 5 5 80 3R 6041340 6042793 GGGTGGATGAGATATCCGAG 59 6042836 6042854 ACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 Rpt3R FBgn0037742 FBtr0301536 1 1 1 80 3R 5581392 5581412 CATCCAGAAACAGGAGATACG 58 5581284 5581350 GGATCGATGCCAATTTGCT 59 NA Drosophila melanogaster 61 CG11755 FBgn0037611 FBtr0081903 2 1 1 60 3R 4504195 4504215 TGCTCTAGGAGTCATATACCC 58 4504236 4504255 AGGTGGTTGGAAAGGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42656 FBgn0261508 FBtr0302437 2 1 1 71 3R 3318944 3318963 TCGAAATGGATGCACTTCTG 58 3318836 3318854 CCAAGTGCAGGCTTATTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34287 FBgn0085316 FBtr0112483 2 1 1 60 3R 1679456 1679474 CTTTGTGAAGGACCTTCGT 57 1679498 1679516 AACGAAGTCATTCCGAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32028 FBgn0062463 FBtr0076660 2 1 1 87 3L 8434233 8434251 AAGGAGCAAGTAAAGCGGA 59 8434164 8434183 TGACTTCACGTTAGTTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 1 1 1 70 3L 22639464 22639482 GTTTGCACTCTTGTCTCCA 58 22639516 22639620 AAATTGGACTTTCCCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078384 1 1 2 80 3L 21526276 21526750 AAACGACAAAGTCATCAGGTC 58 21526216 21526236 CTCATTTCGCTACGATGATCG 59 NA InUTR Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 1 2 2 80 3L 19272149 19272169 CGTGCTGGTAATGTTTATCGA 58 19272210 19272499 CGCTGGTAATTATCCTCTGC 58 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586,FBtr0112890,FBtr0075028 2 3 4 256 3L 19153738 19153756 AACCAGATAGCAGCAAAGC 58 19139355 19139373 AGGATCAGGACCTTCAGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32187 FBgn0052187 FBtr0075169 3 1 1 77 3L 17799120 17799138 GAACTCAACCTACTGCACC 58 17798937 17799081 TTTCAGGAATGTTAGCTTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Jon74E FBgn0023197 FBtr0075207 1 1 1 80 3L 17541553 17541658 TGAATGACGAATCCACTGC 58 17541491 17541511 AGTATTCACAGTCCTCATTGG 57 NA Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 2 2 2 94 3L 15972113 15972415 CGCTAAGAAGATAAACCAAGCA 59 15972470 15972488 GCTTGTAGAGACGCTTCAC 58 NA Drosophila melanogaster 61 CG13454 FBgn0036503 FBtr0075603 2 1 1 60 3L 15510039 15510057 GACGAGAAGAGGGATCCTG 59 15509997 15510015 ATCGTACGCAACGTTTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075648 1 1 2 251 3L 15135437 15135455 GGTGGACAACTTCAAGCAG 59 15132429 15132447 CTGTACTCCACTGGAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32847 FBgn0052847 FBtr0075639 2 1 1 60 3L 15115130 15115148 ATAAGGGATGGGCAGAACG 59 15115172 15115190 GCATAATGGCCACGTAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 3 2 2 115 3L 14023964 14023983 TCAAGTCCAAGTATCCCAGC 59 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10710 FBgn0036377 FBtr0075817 3 1 1 93 3L 13511772 13512487 ACGATAGAATAGCAAGCCGA 59 13511698 13511716 GACCCAACTCTCCCTTGTC 59 NA InUTR Drosophila melanogaster 61 CG33262 FBgn0053262 FBtr0302393 2 1 1 80 3L 13129441 13129463 GATGTACACTCCAGATCTAAACG 58 13129500 13129578 ACCAATACCAGCAATAAACTGG 59 NA Drosophila melanogaster 61 thoc6 FBgn0036263 FBtr0076019 3 1 1 110 3L 12185673 12185694 AGCAAGATTGAGATGTATGGGA 59 12185515 12185602 CTCGGTTTCCCTTTATGCC 58 NA InUTR Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 2 1 1 64 3L 12183344 12183413 TGGAACTGTACACGGTGAC 59 12183440 12183459 GCATTTCCACATCTCGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17153 FBgn0036248 FBtr0075992 3 1 1 113 3L 12111622 12111640 TTCAACACGTCCAATCTGC 58 12111714 12111796 CAACGAATCGTCTAGTTTAGGG 59 NA Drosophila melanogaster 61 viaf FBgn0036237 FBtr0076062 2 1 1 143 3L 11986247 11986265 TGGTCATGAGTCACTTCGT 58 11985953 11986141 GTATCTTCGTTTGGGTCCTG 58 NA InUTR Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 2 3 3 173 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687661 10687679 GCACAGTATCTCTGTCCAC 57 NA Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 2 1 1 159 3L 10458354 10458375 CTTTGGACACTGAATCATATCG 57 10458493 10459287 TAACAGCAAGTCGAAACAGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 3 2 2 98 3L 10081407 10081905 TGGCATATACCTCCAGTGG 58 10081327 10081345 CACTGACGCTACTGTAGCA 59 NA Drosophila melanogaster 61 CG33696 FBgn0053696 FBtr0091684 2 1 1 95 3L 9638579 9643456 AATACAAAGAACAACTGGCCC 59 9643512 9643531 CTGTACAGGTGTTCAGAACG 58 NA Drosophila melanogaster 61 Cp19 FBgn0000358 FBtr0076573 3 1 1 100 3L 8723014 8723121 AAGTTCGCTACTCTGGCAG 59 8723185 8723203 TGACCGTAAGATCGCTGTC 59 NA Drosophila melanogaster 61 Cdc6 FBgn0035918 FBtr0076647 1 1 1 80 3L 8625526 8625546 AAGGAGTTCAATATGAAGGCC 58 8625388 8625484 AGGCTTTAGAGTGTCTTGC 57 NA Drosophila melanogaster 61 MED4 FBgn0035754 FBtr0076889 1 1 1 235 3L 7243417 7243435 AATTGGTGGACCTGTTGGA 59 7243142 7243160 GTTGGCCTGATTGATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12493 FBgn0035571 FBtr0073363 3 1 1 82 3L 4753590 4753610 GCAATCGATGATATGAAGGAC 57 4753355 4753548 GTTTCCTTCAAGTCATCTGAC 57 NA Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073179 2 1 3 127 3L 3901913 3901937 CAATATTCGTAGAGGGTTAATAGGG 58 3901728 3901747 TTTCCGGTCAAAGTCTTCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eIF5B FBgn0026259 FBtr0073144 1 1 1 80 3L 3458993 3459012 GGAGTCTCTAAAGGCTCAGG 59 3458825 3458950 GGACGGATACGAGTTCCTG 59 NA Drosophila melanogaster 61 Drs FBgn0010381 FBtr0073073 3 1 1 203 3L 3369629 3369647 TCAAGTACTTGTTCGCCCT 59 3369814 3369832 TTTAGCATCCTTCGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34265 FBgn0085294 FBtr0112460 3 1 1 60 3L 3268766 3268786 ATTAGGATCTGGCCCTATGTC 58 3268806 3268826 AGTTGGTATTGTAGTACGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42245 FBgn0250911 FBtr0290341 1 1 1 107 3L 2632113 2633547 CCTCCAAAGAATTAGCCGA 57 2633618 2633636 TGGTTTCAGATTGGGACTC 57 NA Nonspecific Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072872 2 1 2 108 3L 2197472 2197490 AATCGTCGTCCGTTGAGAG 59 2197623 2197641 GATGATGCAGAAGAGCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18171 FBgn0035262 FBtr0072800 3 1 1 60 3L 1722693 1722711 TGAGTGCTACTGCGTAGAG 58 1722651 1722671 GGAACTCTTAGCTAGGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13898 FBgn0035161 FBtr0072599 1 1 1 60 3L 803916 803934 CAAGACATTTGCGAAGCCT 59 803874 803893 CTGCTCTGATTCTTCCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NitFhit FBgn0024945 FBtr0072483 2 1 1 129 3L 203776 203847 GCAGTAAACAACTAGCCGG 58 203940 203958 CGCACTTTGATCCTTCCTC 58 NA InUTR Drosophila melanogaster 61 snoRNA:Psi18S-841b FBgn0083018 FBtr0113520 2 1 1 89 2R 17217783 17217801 CAAATGCACTCTGTGTCAC 57 17217851 17217872 TTGCATGGATAAGTCACATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33447 FBgn0053447 FBtr0086439 1 1 1 60 2R 15619008 15619026 ATACATCGGTTCTCGTCCG 59 15618966 15618984 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:S4:56D FBgn0028981 FBtr0086526 1 1 1 60 2R 15302116 15302134 AGTGGTTAAGGCGTCTGAC 59 15302158 15302176 GTAGGATTCGAACCTACGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3663 FBgn0035044 FBtr0072323 2 1 1 85 2R 20549507 20549582 TATATGGCCTCGAGTCCCA 59 20549630 20549649 GTCCGCCACTATGTATACGT 59 NA Drosophila melanogaster 61 CG3608 FBgn0035039 FBtr0072320 2 1 1 81 2R 20500739 20500758 AATCTCTGGCTGAGTATCCT 57 20500802 20500883 ACAGATCGCCCTTAATTCC 57 NA Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 1 2 2 80 2R 19908217 19908295 GAAATATCTCTGCACAAGACGA 58 19908158 19908176 ACTTATTGTGGCCACATGG 58 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071961 3 1 4 91 2R 18957161 18957180 GAAGATCTATCATCGGGCGA 59 18958174 18958196 GGGTCATGTTCTTGGTAATATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9308 FBgn0034681 FBtr0071749 3 1 1 60 2R 17922516 17922535 TACGATCATGCCAATGTCAG 58 17922558 17922576 AGCCACCTTCCATTACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 1 2 3 80 2R 17092793 17092873 CGCCTTCAAACAGTTCAGAG 59 17092914 17092934 GAGTTGAACTGAATCAGCCAG 59 NA Drosophila melanogaster 61 CG30152 FBgn0034543 FBtr0086236 2 1 1 80 2R 16559355 16559633 GTCTCAGTTGTTCGCATCG 59 16559677 16559695 CACGCGTATACAGAGTCCA 59 NA Drosophila melanogaster 61 CG15905 FBgn0034462 FBtr0086491 1 1 1 80 2R 15534920 15534939 ATTCAACATCCACGTTAGCA 57 15534771 15534877 TCGTTATACGTCTCCTCGG 58 NA Drosophila melanogaster 61 mei-W68 FBgn0002716 FBtr0086461 3 1 1 97 2R 15345880 15345898 CCTAAGCTTGGGCATACTG 58 15346017 15346035 CATACAAGCTGCTGTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30126 FBgn0050126 FBtr0086598 1 1 1 158 2R 14916694 14916712 TTTATCACCCGCAACAACG 59 14916554 14916572 CTTGCTGCTGATTCTGCTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 edl FBgn0023214 FBtr0086652 1 1 1 82 2R 14560502 14560520 AACAACTCAACCTCGACGA 59 14555882 14560459 CAACGTTTGAGTTCTTGATCGA 59 NA InUTR Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 1 1 1 98 2R 14552771 14552791 GTCTCAAGTCGACAATATTGC 57 14552636 14552714 GTTCAATTGCCTTAATGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 3 3 3 80 2R 14546264 14546282 TTAGCTTGGTGTCCAACAG 57 14546143 14546220 TCGGAATGAGTTTGCAGTC 58 NA Nonspecific Drosophila melanogaster 61 fj FBgn0000658 FBtr0086754 3 1 1 60 2R 14122486 14122507 AGAATACGGATCAGATTCAGGG 59 14122528 14122546 ATGTTTAAGAGCTGGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 3 2 2 80 2R 14074501 14074522 ATCCATTAATCGTGGATTGCTC 59 14074346 14074460 ACTAGGTATCGCCATACGC 59 NA Drosophila melanogaster 61 Acp53C14b FBgn0034153 FBtr0087081 1 1 1 78 2R 12636895 12636916 TCAAGTCCATATTTCTGCTCAG 58 12636782 12636800 TCACTTATAGTGGCCTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4398 FBgn0034126 FBtr0087157 2 1 1 82 2R 12320347 12320366 CCAAGTTCTATCAGGCACTG 58 12320529 12320547 AACGCTCTGTACATTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15706 FBgn0034093 FBtr0087191 3 1 1 90 2R 12112209 12112288 CCGATTATTTCACGAGCCTG 59 12112138 12112156 TCGGGCAGGAAATAGAAGC 59 NA Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 2 2 2 138 2R 12083326 12083344 ACAATGCGCTACTTTCCAC 58 12083147 12083225 ACCTGTACATCGTGACATCC 59 NA Drosophila melanogaster 61 Ptp52F FBgn0034085 FBtr0289985 3 1 1 80 2R 12061963 12062058 TGATTACACTAAGGTCAAGCTG 58 12061904 12061922 TTGTAGTCCGCATTGAAGG 57 NA Drosophila melanogaster 61 Cyp6a22 FBgn0013773 FBtr0087450 1 1 1 118 2R 10760366 10760452 CATAGCAGAAACCCTTCGGA 59 10760533 10760551 TCAGTAGCATTTGACCCGG 59 NA Drosophila melanogaster 61 LamC FBgn0010397 FBtr0087512 1 1 1 91 2R 10459029 10459047 ATCCACCCAACAATCTGGT 58 10458808 10458974 GGCAACATCCTCTTTGTCG 59 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 2 3 3 80 2R 9835604 9835689 CGTGCCAGATATCATCTGGT 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 1 1 1 69 2R 9280195 9280214 CTATTTATCGGAGGTTCGGG 57 9280059 9280163 TTTCTTCCTCTCATGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17575 FBgn0250842 FBtr0087819 3 1 1 80 2R 8733506 8733525 ATGTTCGCCGAATACAAGGA 59 8733382 8733463 GTAGGCAATGCACTTGCTG 59 NA Nonspecific Drosophila melanogaster 61 CG30051 FBgn0050051 FBtr0114521 3 1 1 160 2R 8323748 8323830 CATTTCTGCTGAGCATCGA 58 8324027 8324047 GATGCTTTCGGTGAAGTAGAC 59 NA Drosophila melanogaster 61 CG13170 FBgn0033703 FBtr0087996 2 1 1 68 2R 8127945 8127963 TGTTTGTCCTGTCATTCGC 58 8127994 8128013 ATAACTTGGGTGTGGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 EndoG FBgn0033690 FBtr0088012 3 1 1 60 2R 8065285 8065305 AATCGTATGTCAAGTACGAGG 57 8065245 8065263 TAGAAGTGGGTGGGAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 2 2 2 120 2R 7949116 7949134 TACACCTGGATTGCGATGG 59 7949218 7949339 TTGTAGTCACTGGGATCGC 59 NA Drosophila melanogaster 61 CG13227 FBgn0033589 FBtr0088107 3 1 1 60 2R 7122854 7122872 TGTTAGAGCCGATGAAACG 58 7122896 7122914 CAGCTGAATAGAGCTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281,FBtr0088308,FBtr0088307 3 4 4 105 2R 6360055 6360073 GAACCTCACCGACAAACAG 58 6359709 6359986 CTGAACCATGATAGGCTGC 58 NA Drosophila melanogaster 61 CG33476 FBgn0053476 FBtr0088319 2 1 1 60 2R 6298047 6298066 GACCATTCTGTGGATCAGTG 58 6297918 6297940 GGGATTCCATGATAAACTTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 3 16 17 82 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193033 6193051 GAAGTTGTATTTGGCACGG 57 NA Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675,FBtr0089674 2 2 2 60 2R 5973577 5973598 ATTGCCACTATCATTTCGATCC 59 5973538 5973558 CCAATAGGAGTATCTTCCGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8027 FBgn0033392 FBtr0088609 2 1 1 92 2R 5092884 5092964 CTAATTTGCCTACAATAACCAGGG 59 5092815 5092834 TATATTTGGGTCGGACTGCA 58 NA Drosophila melanogaster 61 CG11778 FBgn0033371 FBtr0300173 2 1 1 84 2R 4972032 4972050 CAGACATCACCAGGGTAGC 59 4972097 4972176 ATAAGAATCCCTGCAAGCGA 59 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301193,FBtr0301191 3 3 3 82 2R 4895281 4895383 TCCACGATGTCTTCTTGTG 57 4895217 4895235 CAATGTTAGTGGACCACCA 57 NA Drosophila melanogaster 61 Socs44A FBgn0033266 FBtr0088784 1 1 1 84 2R 4015691 4015709 GGAAGAAATGGCTTGAGCG 59 4015756 4015837 CACACTTGGTTGAGCATCTC 59 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 3 3 3 95 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877562 3877641 CTCGTCCCAAATCTTGACG 58 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 1 2 2 117 2R 3803014 3803413 GTTTATAGGCTCCGACTTTCC 58 3802917 3802936 CCTCTTCGTCACTATTCACG 58 NA Drosophila melanogaster 61 CG9436 FBgn0033101 FBtr0086134 1 1 1 60 2R 2645943 2645964 TTGGAATACGTAGACCTCTACC 58 2645904 2645923 TGTCATTGTGGAACTTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a16Psi FBgn0031726 FBtr0100853 1 1 1 122 2L 5622701 5622725 GTATGGAGATAAACGATTCGATAGG 59 5622029 5622621 TACTTGCGCAGAGTTTCCA 59 NA Drosophila melanogaster 61 CG10834 FBgn0032972 FBtr0085943 2 1 1 65 2L 22107028 22107046 CTGGTGACAATACGTCTGC 58 22106981 22106999 GATGTAGTTCTCGGAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 2 5 5 83 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666302 21666320 CGAAGCATTTCGTTGGAGG 59 NA Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485 2 1 2 146 2L 21233891 21236653 TATTAATTATCCGCCTCTGGGT 58 21233766 21233784 CTTAACTTGGTCTGGCCCA 59 NA InUTR Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470 1 1 2 80 2L 21158889 21159013 AGTTCCGATCAGACATGCC 59 21159057 21159075 GGACGGTGGTTCTATTTGC 58 NA InUTR Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 2 9 9 90 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877068 20877156 AGAAATATACTGGGTACTCAGTCC 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 3 5 5 83 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355881 GATAAGCAAATCCTCGTGCG 59 NA Drosophila melanogaster 61 Ntf-2r FBgn0032680 FBtr0081063 3 1 1 60 2L 18454769 18454788 GTCTCTGAATCTGCAGTACG 58 18454811 18454829 TATGGCGTAGTACTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34313 FBgn0085342 FBtr0112511 3 1 1 63 2L 16879895 16879913 TAACAAACGTCGAACTGCA 58 16880608 16880626 ACATAGATCGTTGTGGCCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Tektin-A FBgn0028902 FBtr0080788 3 1 1 70 2L 15854688 15854706 ACAAGCCACTCAGAATGGA 59 15854831 15854849 ATTCCGCAAGTCATCTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)35Df FBgn0001986 FBtr0080760 3 1 1 72 2L 15753406 15753424 CAAGGAGGACAACTTCACC 58 15753513 15753531 TTTCTGATCTCCCTTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42682 FBgn0261568 FBtr0302804 2 1 1 83 2L 14842377 14842398 GATTGATGACATGTTCCTAGTG 57 14842441 14842542 TTGCACAAGCTAGTATCGAG 57 NA Drosophila melanogaster 61 pburs FBgn0032546 FBtr0080634 3 1 1 148 2L 14417184 14417202 CCACTTGATCAAGGAGGAG 57 14416996 14417074 AGTAGCACTCTTTCAGAAACC 58 NA Drosophila melanogaster 61 CG33640 FBgn0053640 FBtr0091617 2 1 1 117 2L 13528121 13528140 GTTCGGTACTCAACAATGGT 58 13528220 13528419 TCGTCTATGTAGGTCACCG 58 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 3 2 2 80 2L 13298386 13298405 GCGTGATGAATAACTCACAG 57 13298445 13298568 AGAACAGAACCTTAGTCAATCC 57 NA Drosophila melanogaster 61 CG14946 FBgn0032405 FBtr0302029 1 1 1 83 2L 12063984 12064002 CCACCAAATTCGCTGTACG 59 12063861 12063938 TGGTTCGAATCAGATCCCTG 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091682,FBtr0091679,FBtr0091680 3 3 5 74 2L 11278115 11278396 GAACTCGGCAATCAAGGTG 59 11278434 11278452 ATGGTTAGATCGCCCAGTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672,FBtr0290007 3 2 2 80 2L 10925291 10925310 AGGAATATTACAACCCGGAC 57 10923662 10925250 CCAGGATACCGATTTATCACC 58 NA Drosophila melanogaster 61 CG4598 FBgn0032160 FBtr0079877 2 1 1 93 2L 9919027 9919045 TAACTTGGAACTGCTGCAG 58 9919102 9919181 TGTGGAGCTAGACGAAGTC 58 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 2 2 2 134 2L 9733521 9742382 TATCAATGACACGCACAACG 59 9733406 9733427 GCCACAAACATATAGATCACCC 59 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 2 3 3 80 2L 9338454 9338473 TTGGTCTCATCAATCACCAG 57 9338514 9338600 GTAAGTAATGGCTCTGGTAGC 58 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 2 3 3 81 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929039 8929058 GAGTTGCCTTAGGTTTCTCG 58 NA Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079578,FBtr0079577 2 2 2 60 2L 8147836 8147857 AAGAGAATGTTGGAGGAAATGG 58 8147872 8147896 TGTACTCTGCATATTCGATATAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13792 FBgn0031927 FBtr0079520 2 1 1 124 2L 7644765 7644932 AAATATCGGGTGAGCTCCT 58 7644659 7644677 AAGGCATTATCGATCCGAC 57 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 1 4 4 84 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378,FBtr0079377,FBtr0079376 2 3 3 105 2L 6801781 6801799 TTGTGAGCGTAGAGGTAGG 58 6801639 6801712 CTTATAAGCCACACGCGAC 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247,FBtr0300327,FBtr0273248,FBtr0273250 3 4 4 80 2L 6682193 6682212 CGACGTAAACCTATATGCGC 59 6682076 6682151 TGAATGGCTCCACTAAGGAC 59 NA Drosophila melanogaster 61 CG31633 FBgn0051633 FBtr0079325 2 1 1 81 2L 6655008 6655083 GCAAGGATGACTTGGTTTCG 59 6654946 6654968 TGTGAATAGCTGCTACTAGTAGC 59 NA Drosophila melanogaster 61 CG13992 FBgn0031756 FBtr0079237 1 1 1 60 2L 5965731 5965749 GACAGTGATGAGGCTGAGG 59 5965689 5965708 TCATCGCCGTATCATCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7239 FBgn0031740 FBtr0079139 3 1 1 118 2L 5802603 5802621 AACACCATCTTCTTTGGCC 58 5802703 5802780 TTGACTTGCCTGAACTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG8680 FBgn0031684 FBtr0079025 1 1 1 80 2L 5099783 5099801 AACGAGTTGTCTTCTGCGA 59 5099658 5099739 GATTTCCGGGTTTGTCCAG 58 NA Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 3 2 2 75 2L 3545742 3545760 GATCACCTATTCGTGCGAG 58 3545799 3546740 CTGACTACATCTGTGCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG17265 FBgn0031488 FBtr0077646 3 1 1 88 2L 3014564 3014649 GCGTACCAGAACAAACTACG 59 3014700 3014718 AAGTAGAGGCAGAGCTCCT 59 NA Drosophila melanogaster 61 CG8813 FBgn0031476 FBtr0077628 3 1 1 60 2L 2870148 2870168 CGTATGAACACCACCTATCAG 58 2870190 2870208 AAATACCCTCCGGGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068,FBtr0301066,FBtr0301067 2 3 3 80 2L 2029689 2029707 GAGCTAAATCCGCAGTTCC 58 2029751 2029848 CAGCTGGTTGAAACAGGTG 59 NA Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085 3 1 2 111 2L 462385 462403 ATGGTTCCGAGAGTGATCC 58 462037 462055 AGGATGGATCGGAGTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 2 4 5 96 2L 344410 344428 AAATCCAGTCCGCTAGAGG 58 344484 344571 GCGGAGAAAGACAATTAAGACTC 59 NA Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078 2 1 2 111 2L 557662 557737 TTAGCCATCATAACAGGCGA 59 557570 557588 TCATAGATGAGCCTGGCTG 59 NA Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 3 1 1 83 2L 1165016 1165035 CGATTACTACTTCACCAGGG 57 1165139 1165157 TTTGTCATGAAGAGCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 2 4 4 81 2L 2738607 2738692 TATTGAGATATCCCGCCGA 57 2738737 2738755 GCAAGGTAATAGGTTCGCA 57 NA Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 1 1 1 67 2L 2845531 2845549 AGTTGCTGTCACAGTTCTC 57 2845421 2845439 TTGGGATTACTCTTGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 3 4 4 224 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882296 2882314 GATTATCCGCGAAGGAGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG3542 FBgn0031492 FBtr0077648,FBtr0077649 3 2 2 86 2L 3025755 3025835 AACAAACTGCGAGGTTCCT 59 3025881 3025903 GTTTGAGTCGTTCTGAAGTAGAG 59 NA Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 3 2 2 198 2L 3040551 3040569 GAACAAGATGCGCTGTCAG 59 3040729 3040800 AGGAGCAAGACAGTATGAAGG 59 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112638 3 1 3 163 2L 3372914 3372932 GACTAGGATCCTCATCGCG 59 3368185 3372789 ATCTTTAATCATGAGCGTCGC 59 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641,FBtr0112639 3 2 3 92 2L 3368181 3369125 GGGTTCTCTGGATTAAAGATAGTG 58 3368112 3368131 TACAACTGCTCGAACTTTCG 58 NA Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 1 2 2 164 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466925 3466943 ACAATCTCGTTGTCGACCA 59 NA Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 1 3 3 80 2L 3721528 3721551 CTGAATGAGTACTTCTTTGATCGG 59 3721587 3721663 ATAATGCAGCTTTCCAGTTCTG 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 4 5 112 2L 4473964 4474340 TAGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 1 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 1 3 3 80 2L 5769935 5770022 GGCACCCAGAGTATTTCCA 59 5769873 5769892 TCCTGTAGCTCTGTCTTGTC 58 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 2 3 3 116 2L 6044340 6044436 ACATTCCAGGTTACAAACAGC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327 2 1 4 87 2L 6680046 6680064 CAATGATACCGGGAACGGT 59 6678216 6679995 AATCTCCATGCGACTCAGG 59 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 1 3 3 80 2L 6713220 6713375 CATTCCACAGGCCTTTCTC 58 6713158 6713176 AACGAGTTGAAGATGACGC 58 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386 3 1 3 80 2L 6767030 6767266 TGCACAAAGCTAATGCTCTC 59 6766969 6766989 CCTGTATGCTCTCATCCAGAG 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 2 5 5 132 2L 6924279 6924299 TGGTTATCATGTACGACCAGG 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 2 4 4 85 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499745 7499824 GACTGCAGGTATTTAGATTGGG 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079512 3 1 5 98 2L 7697533 7698732 CAACACTGAATTCCCAATTGC 58 7697455 7697475 GCTTGATTAGGATGTGAAGCT 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 2 6 6 80 2L 8261677 8261754 GCTGCATACCAAAGTTCCAC 59 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 1 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 3 2 3 133 2L 8482609 8482627 GTATCGGGACTATTACCGC 57 8482724 8483141 ATGAAGATGCATGGATCGG 57 NA Drosophila melanogaster 61 raw FBgn0003209 FBtr0079746,FBtr0079745 2 2 2 86 2L 8712294 8712397 TTTCGCAGCAAGAATACCTC 58 8712227 8712245 TATCCAATACGGGCAGACC 59 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 1 3 3 80 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929038 8929057 AGTTGCCTTAGGTTTCTCGA 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 1 2 2 135 2L 9940471 9940490 TAACCGCAGAACAGACTCTG 59 9940648 9940666 AGTTCCTTTGCATTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 1 2 2 87 2L 10011895 10012404 GATTCCAAAGCTGGAACGC 59 10012449 10012473 GGACTTCACTTGAACTGATTATCTC 59 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 3 3 4 134 2L 10248626 10248644 ATGGACGCTAATCTCTGCC 59 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 1 2 2 80 2L 10446356 10446531 TTATGTCAAGGATGACGCTG 58 10446574 10446592 ACGGATTCGTTTAGTGTGG 57 NA Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 1 2 2 80 2L 10839573 10839593 ACATGATTGAATGGTTCCTGG 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223 2 1 4 140 2L 11142950 11142970 AGGGTGAACATTATGGAACGT 59 11142232 11142785 TATGGGAACCCGAATATGGG 59 NA Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 3 3 3 170 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105116 12105188 CGTTGGTGGAGATACCCTC 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 1 2 4 91 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404101 12404120 GAAGCTTCGAATTCGGAGTC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 2 2 17 113 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727110 12729196 AGTACGAGGTAACTTGGCC 59 NA Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 2 2 2 87 2L 12912880 12912955 TACGTACAGCACTATAACGC 57 12913005 12913023 AATTGATGCTCAACACGGT 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 1 3 9 80 2L 13274310 13274331 GAGCGTATCATACCGATAACTC 58 13274372 13276260 GGAGACTCCATTACCACCA 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 3 3 9 176 2L 13274016 13274036 AGAACTTCGGATCAAATCCAC 58 13274365 13276255 CTCCATTACCACCAAAGTTGG 59 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 1 2 2 80 2L 13300856 13300936 GTGTTACATGAGTATTTCGACTGG 59 13300974 13300993 GGAGACCAGAGTGATGAGAG 59 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080547 3 1 3 139 2L 13879586 13879604 ACTCCACAACGATTCTCCC 59 13879704 13891318 TGACTGTTCACAAACGAATCTG 59 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 1 5 5 80 2L 14195780 14195801 TAATGTCATACACATGCTCGAC 58 14189222 14195741 TACAGGTTCAAGCTCATTAGC 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 3 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 2 5 5 70 2L 14616430 14616515 ATCTGAAGAACCTGGTGATCC 59 14616547 14616565 ATTGATTGCCTTCAGCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 3 2 2 80 2L 14617628 14618076 GACCAAGAATATAGCGAAACTGG 59 14618115 14618134 GGCTTTATCGACTGCAACTG 59 NA Nonspecific Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080702 1 1 2 80 2L 15093612 15093630 ACGATCCCTGAGATACCAC 58 15093672 15094142 TAGCTTGTCGCTCATATTCAG 58 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 2 2 2 196 2L 15895685 15895761 CCAAGTTACGAGTCATACTTTGTC 59 15895916 15895934 CGCCAGAAGGATTGAATGC 59 NA InUTR Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080904 1 1 16 98 2L 16771052 16771070 AGAAGGCTCGTGTCATCTC 59 16771129 16771950 GACAGTATTCTTTAACACCGGG 59 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 1 4 4 84 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825418 AATTATTTCCATGGCTAGACCC 58 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080918 3 1 4 91 2L 16817452 16820122 GCCAAACAAGACCATCACC 59 16820176 16820195 TGGATCCGCTATTCTTGGTC 59 NA Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 1 1 1 138 2L 17590767 17590787 GAACTACATTCTGATGCAGCA 58 17590947 17590965 TCCTTGAAGAAGAGCCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 3 2 2 84 2L 18679153 18682279 GGAGGATAGTAATGTTAAGAACCC 58 18682322 18682340 AGAGTCCAGTGAGTTGAGG 58 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 2 4 4 108 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856751 18856771 ACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222 1 2 3 119 2L 19385700 19386089 GAGATTTCCAACAAAGTTTGGG 58 19385296 19385314 TATAACCTCCACCGTAGCC 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 1 2 6 80 2L 19419920 19419938 TACGGAAAGATCGATCCGG 59 19410633 19419879 TAATAGAGCATATCCTGGCAGG 59 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 2 3 3 84 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457304 AATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 1 2 2 105 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527942 19528094 AAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 3 2 2 178 2L 20095776 20095794 AAGACTGGACTGGAGTTGC 59 20095936 20096017 TTGTCCTCGTTGTAACGCT 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081410 3 1 2 194 2L 20758656 20760537 AAACGAAGAATGTCTCGTCAC 59 20760693 20760711 TAGCTGCTGGATGTACTGC 59 NA InUTR Drosophila melanogaster 61 vari FBgn0250785 FBtr0089945 3 1 3 80 2L 20790710 20791238 CGCTATACTTGCTACATGCG 59 20790649 20790669 CAATCCAATATCCCTGCATGG 59 NA Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0081498 1 1 2 93 2L 21166944 21167020 GGAGTAGATATACAAATGCGACG 59 21166873 21166896 CTAAGTACGAGTTGCAGTTAACTC 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 1 3 3 109 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 3 3 3 81 2L 22818638 22820176 CATTGTGGATCCAATCTCGAC 59 22820218 22820237 AACAACCAATTGCTTTGCAG 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0091528 2 1 2 80 2R 1131095 1133464 ATTCTGAAGGCATGGTGGA 59 1131033 1131054 CACATAAGTCGGTGACAATGAC 59 NA Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086115,FBtr0086116 2 3 3 60 2R 2557136 2557154 CTTAACGAGGCCTACACCT 58 2557177 2557196 ACTCTGACTTAACCAAGCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 1 3 3 98 2R 2890650 2890731 ATGTCCATGACGTACTCGA 58 2890792 2890811 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111053,FBtr0111056 3 2 59 81 2R 3219877 3228461 TGATTGTGAATGTACCTCCCA 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111088 2 1 59 91 2R 3236477 3242810 GGTTCCTGCATTCAGATGG 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0300481,FBtr0300480 1 3 8 91 2R 3362871 3362952 AATAAATGCAGGAGATCGGC 58 3361301 3361320 GTTGTGATGTGAAGATCCCA 57 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 2 5 5 80 2R 3371066 3371168 TGGACTTTATGTGGGATATCG 57 3371006 3371024 AAGTGCGATCTTTCTCGTC 58 NA Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 1 1 1 60 2R 3561563 3561584 TACACGTACTTAGATGGTAGGC 59 3561464 3561482 TAATCAGGCGCCTCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940 3 1 5 87 2R 3569105 3569123 TTATAAGGCGTGTCCGGAC 59 3568966 3569059 TTCGATCTCATTCTTAGGAGACTG 59 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883 1 1 2 80 2R 3819348 3819424 CCATCTAACAGTAGCAATTTACCAG 60 3819292 3819311 GATCTTGTTCCGCTTATCGC 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273326 3 1 4 118 2R 4376854 4408629 CTTTATTAAAGGGTCCATCAGC 57 4376757 4376776 CTTGTATGGATGTGACCGAG 58 NA Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 1 1 1 136 2R 4482354 4482372 CAACATGTTCTGCAAGCTG 57 4482029 4482047 GCGCATTATCACAGATGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 3 2 3 113 2R 4607432 4607450 TACACCGTGGATCTGAGTG 58 4607279 4607355 ATCGAAGTTCTGGTAACGC 58 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 3 3 3 92 2R 4799447 4799530 GAGAAGAATGCTCCTGTTATCC 58 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 1 2 12 181 2R 5006308 5006327 CACATCAACGTCAAACAGTG 58 5006542 5009249 CATTATCCTCGGATTGCTGG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 3 3 10 81 2R 5155478 5155888 GAGATATCTGCAGAAGGCG 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 1 3 3 80 2R 5468498 5468577 ATCTACTACGAGGGTTCGG 58 5468619 5468639 ATGATCTCCGAAATAGAGCAC 57 NA Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 1 2 2 96 2R 5474091 5474163 ATATCGCTGCACAACTCCT 59 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 2 3 3 102 2R 5475201 5475289 AAGGGTATCAGGTCCACTC 58 5475352 5475373 CATAGGTCACGTAAGTGTACAG 58 NA Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 2 1 2 78 2R 5476728 5476747 TAAATACTTCGCCCAAACCA 57 5476841 5476859 GTCTTATTCGCCTTCACGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 2 2 2 120 2R 5752949 5752968 TCACAACCATACAGCAGGAG 59 5752717 5752797 AAGACTCCAAACCACTGCA 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088445 2 2 5 119 2R 5807023 5807041 GATCTTACGGCGACAACCT 59 5806556 5806944 CCGATGGATAAATTATCAGGGAC 58 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0113062 2 1 5 87 2R 5948856 5949609 GGAGTTTCACAACCTGCTC 58 5949660 5949678 GACCGACTGATCCATCCAG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088347 2 1 17 181 2R 6182006 6182118 TACACCACCAAGACGAACC 59 6182260 6182361 TACCATACAACTTCTCGTCCTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089352 1 1 26 158 2R 6419731 6419749 ATGACAATGGAGGAGCTGG 59 6413354 6419548 CAATTCGAGCAGACCTTGG 58 NA Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 2 3 3 80 2R 7174697 7174719 GGATCATCTTACGTATTTGGTGG 59 7174583 7174660 GCATTCATCTCAACATTGATGG 58 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 2 2 2 86 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877123 7877143 CTGATTTACGATACCGATGGC 59 NA Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 3 2 2 89 2R 8034897 8034915 TGAAGAGGAGAACCAGGAG 58 8034688 8034844 CTATCCGATTCATCCTCGC 57 NA Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 3 2 2 103 2R 8041067 8041154 TTTATCCTCTGGTTAAGCACAC 58 8041218 8041413 GTGCTCGTAGTTCGATGAG 58 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088006 1 1 2 149 2R 8088045 8088287 CTGATCAGCAAACCGAACG 59 8087526 8087544 TGTAGGTACCATCGATGGC 59 NA Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 3 2 2 89 2R 8142680 8142698 ATGACCAAGAAGCATCTGG 57 8142798 8142821 GTACTTCTTAAGCATACTCTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 1 2 2 93 2R 8156864 8156882 GAAACTCACAGACGAGGAG 57 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 2 3 3 92 2R 8212163 8212182 CATACTGTTGCTCCTATCGG 58 8212020 8212042 GTAAACACAGGTATATCCATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 muskelin FBgn0033757 FBtr0087885,FBtr0087886 1 2 2 80 2R 8516770 8516845 GCAAAGATCAAAGAGGAACTG 57 8516710 8516729 AGAAGAGATCATGCTTTCGT 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 3 8 8 93 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560464 8560483 GACGAAACTCGTAAAGTCGG 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 3 8 8 91 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560466 8560484 CGAAACTCGTAAAGTCGGG 58 NA Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 3 3 3 103 2R 8822745 8822765 ACAATAGACAGTATCCGGGTG 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 AQP FBgn0033807 FBtr0087766 2 1 2 136 2R 9100462 9100540 CTAGTCGTGGCAGTTTACG 58 9100344 9100362 ACAATGATGTGCTCCAGGT 59 NA Drosophila melanogaster 61 CG33470 FBgn0053470 FBtr0087657 2 1 2 60 2R 9300125 9300146 ATAGGAATGGTCATACCATCGT 58 9300167 9300185 AGATTGCTTACGTGCTGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 cnn FBgn0013765 FBtr0100656 3 1 6 111 2R 9332017 9332035 ATCCCTAACAGCCTGTGAG 58 9330655 9331942 CGGAAATGGGTTGGATGAC 58 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 1 5 5 81 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 1 1 1 71 2R 9725506 9725524 AAGGAGATAGCCACCTTGC 59 9725994 9726018 GTTGATATGGCCATTCGTATATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 3 3 15 81 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087605 3 1 4 110 2R 9876016 9876036 CGGAGAAGCAAGTCATAACAG 59 9874965 9875884 AGTATCCATCACCCGTTGC 59 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 2 2 2 81 2R 11109920 11110009 ACGCTTTCAAGACATTGCT 58 11110054 11110072 CACTTTCAGCGACTCTACG 58 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 2 3 3 80 2R 11204639 11204718 CAAAGTGGGATAGGCTCAC 57 11204762 11204780 CGTATTCCTGAGTTTGCCA 57 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 2 5 5 80 2R 11211582 11211605 GATAATTAACGATAGGGAGATGCG 59 11211644 11211716 GGTTTCATTGCATCAGGCA 59 NA Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 1 1 1 100 2R 11461003 11461021 GAACCTACGCTTCATGTGC 59 11460863 11460881 TTGTGGAGCAAATTACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 1 2 2 138 2R 11575747 11575765 GAGTTCGAGCACTTCACTG 58 11575563 11575581 ATACTCCTAGTTGGGCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 2 3 5 136 2R 11773780 11773799 GACCGTGATATACGAGACGG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 1 3 5 135 2R 11773780 11773798 ACCGTGATATACGAGACGG 58 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 1 2 5 80 2R 12020076 12020098 GGACCTTCCTTCATCTATCTAGG 59 12020136 12020349 AAACTTGTACGAGATGTCGTC 58 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089592,FBtr0089591 1 2 5 80 2R 12020076 12020098 GGACCTTCCTTCATCTATCTAGG 59 12020136 12020349 AAACTTGTACGAGATGTCGTC 58 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 2 2 5 114 2R 12216143 12216163 ACACATAGATCGTCTCCAGTG 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009 1 1 2 112 2R 12310243 12310526 GTAAACGGGAGAAGGTGGA 59 12310601 12310620 GTAATCCTTGGGATTGTGGG 58 NA Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 3 2 2 204 2R 12473800 12473818 AAGATCCTCAGCTCTGTGG 58 12473986 12474004 TCTTGGCCTCCTTCTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 3 1 1 62 2R 12943888 12943908 CGAAGGCTCAGAAGATAACTC 58 12943782 12943803 CTCTGTTTCCCTATTTGTTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 1 7 9 80 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958998 12959240 TTGAGCTTGAGTGTTATCACTG 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 3 5 5 182 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400435 13400455 GACTAAGGAACTCAGAGTGGG 59 NA Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 2 3 3 91 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563333 13563425 CTAATGGCCTGGATTTCGTC 58 NA Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 3 2 2 104 2R 13623914 13623932 GAAGTCTTCGCTACTGCAC 58 13623773 13623850 GGATCAGATCCATAACTCATTCG 59 NA Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 3 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 1 2 2 80 2R 14660395 14660473 CTATGTCCAGAGCTGTTTCG 58 14660516 14660534 TAGACACAGGCGACTATCC 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 3 3 12 82 2R 15064176 15064195 TGATTAGTCACAAGCAGTGC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 2 5 12 169 2R 15062803 15063700 CAATTCACTTGGACCACGC 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086509 2 2 4 98 2R 15130001 15130019 GATAGCGTTTCCTCGACCA 59 15130078 15130217 CGGAGATTTCTGGTTATCTGTG 59 NA Drosophila melanogaster 61 CG10062 FBgn0034439 FBtr0300965,FBtr0086522 3 2 2 80 2R 15265128 15265146 GAGGAGAATCCTCTGCAGG 59 15265188 15265282 CAAGTTGATGAGAGCTTTGCA 59 NA Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 1 2 2 80 2R 15332874 15333440 GAGATACCATCCCACGTCC 59 15332812 15332833 TATTTCGGTAGAACTGTTGGTG 58 NA Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 3 2 2 80 2R 15332881 15333448 ATTTCCGGGAGATACCATCC 59 15332820 15332839 TAGAACTGTTGGTGTAACGC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 3 2 19 104 2R 15359155 15359173 ACAAGTGGATGAACATGGG 57 15359240 15360332 CTAGAGCTTCCGTCTTACCT 58 NA Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 1 2 2 80 2R 16193965 16193984 GTATCAGTACCTGGGAATCG 57 16193841 16193925 GGTTGTTTATAAAGTGCCACTC 58 NA Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 3 2 2 80 2R 16193964 16193983 TATCAGTACCTGGGAATCGT 57 16193840 16193923 CGGTTGTTTATAAAGTGCCAC 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 2 2 9 95 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399674 17399908 GAAGTACTTGACGTAGCCCT 59 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951 3 1 2 83 2R 17423798 17423819 GGCTATTCCAGAACCAATAGGA 59 17423673 17423760 GGGCTTAATGTGAACTTTATACTCC 60 NA Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 2 3 3 86 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608827 17609375 TAGGCGATGATACCTCGGA 59 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071802 2 1 2 137 2R 17960563 17960727 CTCTATAAGCAGAGCTTTGCC 58 17960379 17960397 TTCAATATCGGCTTCCGCT 59 NA Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 1 2 2 85 2R 18079225 18079243 CTTCCCAGGTCCTTACTGC 59 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859 1 1 2 86 2R 18516053 18516387 CTCGCACCAGTACAATCAC 58 18517084 18517102 GTGAGATCTTGGGAAAGCG 58 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 3 3 3 90 2R 18764356 18764443 CATCAGCAGGAATAAGTCAGTG 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 2 2 2 88 2R 19132119 19132188 GATGACCGCATTTACTGCTG 59 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0072029 3 2 3 109 2R 19279421 19280899 CAAGGAGACCTGGATCCTG 59 19279330 19279349 AAGTTACGGAGAGGAAGGTC 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 3 2 4 80 2R 19797341 19799203 TATGGGTCGTACGATGACTC 58 19799242 19799264 CAGATATAGATTTGGGTCGATGC 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 3 6 6 82 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 3 4 4 91 2R 20419982 20420000 AATCCGAAACCATGTCCGA 59 20420052 20420129 TTGTCGTATGAAGTTGATGAGG 58 NA InUTR Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 2 2 2 85 2R 20569795 20569813 TCATAGTCGTAGGCACCCT 59 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 1 3 3 80 2R 20721182 20721203 CACCCTCACATTATCTACCTCC 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413 1 1 6 92 2R 20821644 20821662 ACCTACTCAAAGCGTCTGG 59 20817483 20821588 AGCTGGAGTTACGATGCTG 59 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 1 3 3 85 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 3 7 8 119 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878689 20878708 ATTCATCCTGGACCGATGAG 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 2 4 4 178 2R 20981954 20981974 TGGTAAGGAGTTTGGAAAGGA 59 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 1 3 3 148 3L 224170 224977 ACTACGAAGTGAAGTCGCA 59 225089 225107 TTTCGCATAGATGGTGGCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299984,FBtr0301553 3 2 10 152 3L 300837 300902 GATTCTCAATCCTCACAGCA 57 301017 301035 TTTCTGCAATACGCCTAGG 57 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 2 3 3 80 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307566 307584 TTCGCAGCTCAAATTGCTG 59 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 1 2 3 80 3L 1254260 1254278 CAAGAAGCCAAAGGTCGAC 59 1254321 1254413 TCACAGTCGTCCACATTCTC 59 NA Nonspecific Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 2 3 3 76 3L 1299143 1299161 ACTGTCTACGGCTTCATGG 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 3 4 4 112 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345760 1345779 AACTTAAGGAATGCGTTCGG 59 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 3 2 2 83 3L 1435040 1435059 CTACTTGAAAGTGGTGTGCC 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 3 2 2 80 3L 1603334 1603355 GTAGAGAAACAAATAGACTCGC 57 1603396 1603472 CGTTGTGGTTCCTATCGAG 58 NA Nonspecific Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 1 5 5 76 3L 1635310 1635330 AAGAGGAAATTCTGGCTTCAG 58 1635191 1635209 ATAATGCCCACGACAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 1 5 5 76 3L 1635310 1635330 AAGAGGAAATTCTGGCTTCAG 58 1635191 1635209 ATAATGCCCACGACAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798 2 1 2 82 3L 1723633 1723651 AGCACGGTAGATGCATCTC 59 1718086 1723590 GCATCTGCAAATTATATCGCAG 58 NA Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 3 2 2 81 3L 1834921 1834940 TTCGTTATCCTTTCGTTGGC 59 1834674 1834882 TTGGATGATCATAGTAATCCAGGG 60 NA Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 1 2 2 187 3L 2370045 2370123 CAATTGCTGCTCTTACAAATCG 59 2369879 2369897 TTCTCCACGCCTTCTTCTC 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302675 3 1 12 88 3L 2462944 2462963 CTAGTGACAGACAGTTCGAG 57 2463086 2463104 GATTGCTGAAGAAGGCCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 3 7 12 133 3L 2436111 2436130 ATCAATCTGATCCCGAGGAC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 1 1 1 115 3L 2595894 2595916 CACGATGAGAATATTCTCGAGTG 59 2596047 2596065 CTCTTGGCATACTTGGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072932 3 1 7 122 3L 2631905 2633547 GTAGAGACCAAGAATTAGCCGA 59 2633628 2633648 CGGACTTCTTGTTGGTTTCAG 59 NA InUTR Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 3 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0113129 2 1 15 88 3L 3078042 3083748 TGTATACGGCTGCTATGGA 58 3083800 3085212 CGGCGTGACCATATAAGTG 58 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 1 5 5 84 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131028 3131121 GTTGAGAGTCGATATTATGGGC 58 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 1 2 2 80 3L 3179413 3179956 ATTTCTTGGCTGGAATCATGTC 59 3179995 3180015 GTGAATTATGTGGCCATCCAG 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 2 4 13 81 3L 3516815 3552793 AAATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204 3 1 2 145 3L 3613953 3614080 GATGAAGGATATCTCGCGC 58 3614189 3614207 CACTGAGAGCAGTAGAAGC 57 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 3 3 3 80 3L 4082635 4084744 AACTGACGGCATATGATCTC 57 4082574 4082593 CATCGATTACCTTCAGCAGG 58 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 3 3 3 100 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224840 4224935 GTCTTCCTCATTAAGTACGGG 58 NA Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0113138 1 1 2 168 3L 4363118 4363756 CGAAATTATTGGCAAGCGG 58 4338124 4338142 AACTTGTCCAGAGCATCGA 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301098 2 1 4 81 3L 4568936 4577922 GGTTTCGATCGGGATACAC 58 4578774 4578792 ATGTTGATGCCTTATCGCT 57 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 1 2 3 83 3L 6093789 6093807 AAGCAGAGTGTGGAGAAGG 59 6093853 6094044 GTAGATGTCGCTAAAGGCAC 58 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 2 2 2 94 3L 6600094 6600114 CACCAACAGGATATTCAGCAC 59 6600167 6600244 TGAGAGGAATCTTGGCTATCTC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106 1 6 11 158 3L 7042047 7043665 CTTCTCAATACGCCAACGC 59 7043785 7044351 ATTCTGTACCCTGGATGAGAG 58 NA Drosophila melanogaster 61 corn FBgn0259173 FBtr0299641 3 1 2 106 3L 7137237 7137257 TCCTCGGTATTCTAAATCTGC 57 7137098 7137169 AGATTGGACCTGAGTACCA 57 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0299552 1 1 9 83 3L 7158081 7158099 TGCTCATCCCAACCATAGC 59 7157941 7158036 GACTTTGCTTGTGTCTGTAGC 59 NA Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 3 2 2 83 3L 7352943 7353032 AATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 2 2 4 155 3L 7926881 7928486 TCGGAGAAGAATGAACAGGT 58 7926209 7926227 ATAGGAGGCATCTAGGCAC 58 NA Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076696 2 1 2 225 3L 8195747 8195765 AACAACGTCTTCAACTGGC 59 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 1 2 2 80 3L 8343181 8343258 TCCTTCATATGCCTGAGGA 57 8343301 8343320 CTTTGTAGAGATCACGGAGC 58 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 2 4 4 116 3L 8463416 8463434 GCTTATACCTAGGGAGCCG 59 8463573 8463863 GGCCGTTGTCTAAAGTACTG 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 1 3 13 161 3L 8627811 8627829 CAGTATCATGAAGCAGCGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 3 5 5 80 3L 8778944 8778962 GCGTTATATGTCCAAGCCG 59 8779005 8779080 TCCTCAAATTTGAGAACCGC 58 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 1 3 4 110 3L 8942372 8942766 TTACCAAAGGCCAACAGTG 58 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 1 2 2 82 3L 9366349 9366367 TCATATTCACCTGCCGGTC 59 9366411 9366499 GATCACCACATTGCTGTATCC 59 NA Nonspecific Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303 2 1 3 80 3L 10216049 10216068 GAGACTAAATAAGTCGGCCA 57 10215171 10216008 GGAATTCCGGTAGGTATACTC 57 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076301 1 1 3 119 3L 10217325 10217967 CGAATTACGGGTTTATGCCAG 59 10217226 10217244 CTGGACCACCCATGTAAGG 59 NA Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 1 2 2 94 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626524 10626542 TAAGCACATTAGCCTCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 3 1 1 99 3L 11114485 11114505 CGCTTTATTCCTAGGATTCCG 58 11114722 11114740 GGTTCTTCTCCAGACAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 1 3 3 228 3L 11166960 11166978 AAGTATCTGCTCTTCGCCC 59 11167239 11167655 AAACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 1 4 4 80 3L 11520328 11520347 CTGATCTCAAAGCCCTAGTG 57 11518762 11520285 CAAATAGAGCGAGGGTGTG 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 3 3 4 80 3L 11769205 11769288 ACTTACTGTGATGATACACCAC 58 11769146 11769167 TAGCACTTCACATATGTGTTGG 58 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 1 4 4 80 3L 12805309 12805389 GCTTTGCTCAATACGTATAAGC 58 12805429 12805448 CTCCCTTGGCTTAACATCAG 58 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942 3 1 3 189 3L 12820674 12824992 CACACCACATGATCAGGAG 57 12820503 12820521 GAAATCGTATCCTTCGCCG 58 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 3 3 3 82 3L 13222208 13222227 ACAAACTAGCCACGAATTGC 59 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0300701 1 1 2 80 3L 13432952 13433044 AACCTGTACGAGATCGCTG 59 13432890 13432911 GATACGCATTGGAGTAGATGGA 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 1 3 5 80 3L 13474165 13474183 CATGGACAACATGTTCCCG 59 13474227 13474323 AAACCAAAGTGTGAGTCGC 59 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 3 4 4 87 3L 13903644 13903662 AGAGCACGAGAAGAATGCA 59 13903307 13903593 ATCTGAGTCATTGCTGGCT 59 NA Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 1 2 2 112 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075456 14075478 GTACTCCGTATCTTGGATATCCC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 1 2 6 80 3L 14193478 14193496 ACAACCTAAATGGCAGCAC 58 14193538 14193849 GTTCGTCATCATCTTGAGGTG 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422,FBtr0273427 1 2 7 80 3L 14500762 14500781 AGGTACGAAGGATGTTCGTC 59 14410283 14500721 AGGGTACCAAGATCTGATTCG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 3 2 2 85 3L 14989528 14989605 AGAAGATATGGTACGCTTGGA 58 14989652 14989670 AGGAACCAGAAGAATGCCC 59 NA Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0113171 1 1 2 97 3L 14985708 14987693 ACTTTGAGGGTCTTGAGCA 58 14987754 14987772 GTATCCCTGAGGTCGATGC 59 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758 1 1 4 130 3L 15486662 15488340 AAGTACAAATGGTTAGATCGCG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA InUTR Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543,FBtr0075541,FBtr0075542 2 3 3 120 3L 15809126 15809144 AAGATAACGGGTCTGCTGG 59 15806715 15809043 AAAGAATGGCAAAGAAGGCG 59 NA Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 1 2 2 93 3L 15972040 15972061 CTGCAAATGAGTTGTATTCAGC 58 15972112 15972414 GCTTGGTTTATCTTCTTAGCGT 59 NA Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 1 1 1 101 3L 16225353 16225371 AATGTTCGTCAGATCCGCA 59 16225492 16225510 GATCTCTTGTAGGCCGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 2 3 4 80 3L 16377075 16377096 TTTATCAAGCCCATAGACAAGC 58 16376956 16377038 GAAGATAAGTTGGGAGTAAAGCG 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 2 3 3 65 3L 16485800 16485818 ATTGCCATGCTATTGGCTG 59 16485591 16485772 AATGATTGTCGTATCCCTCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 frc FBgn0042641 FBtr0299820 3 1 2 62 3L 17423217 17423235 CGCTCTTGAATCCAAGACG 59 17423116 17423134 CATCCTCTCCAGTCGTCTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 3 2 4 94 3L 17591984 17592003 CCTTTATCGACGATGCACTG 59 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 3 2 3 180 3L 17636818 17638000 GTTGCAACACCGTAAAGGT 59 17636656 17636675 CAAGGCGACATGTTCATACC 59 NA InUTR Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100567,FBtr0075111 1 2 3 252 3L 18594636 18594654 CTATGCCATGACTGAAGGC 58 18594291 18594372 GAAATAGTGACCAAGTCCCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566 1 1 3 83 3L 18608885 18608906 AGAATTTCCACGTACTAATGGG 58 18594546 18608843 GCACTCCAATTTCTAATGCTG 58 NA Nonspecific Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 3 4 4 80 3L 18824236 18824260 GAGTACTGTAATCTACACAAACGTC 59 18824116 18824198 GCCAAAGTGTAATCTGCGG 59 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 3 3 3 185 3L 18874333 18875419 GGGTCCAGAACAAATACACG 59 18874069 18874186 TAGTTGATCCACTGGTAGGG 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 1 2 3 80 3L 18874345 18880172 CCATTGCTAGAGGGTCCAG 59 18874283 18874302 GATGTAGGACACGAACTTGC 59 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 1 2 2 88 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259704 GAATGTACGACCGTGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 2 2 2 80 3L 19603759 19603777 TTAGGAGCATCCCTTTCCG 59 19603639 19603719 TTGTAGACGTTCTGGGATATCTG 59 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0302047 2 1 2 96 3L 19890505 19902364 TGTAAAGCCACAAATCCAAGTG 59 19890430 19890449 TGTTGCTATACTGTGCAAGC 59 NA InUTR Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 3 2 2 138 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997627 19997645 GGCATTGGTCTGATTAGCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 1 2 5 123 3L 20146359 20146377 CAAGATGGGCATTATCGGC 59 20145396 20146274 AGTATTGTTAGTGTGGCTGTG 58 NA Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 2 2 2 83 3L 20311906 20311983 TTTCTGAACATCACCACTTCC 58 20312026 20312046 GTTGTTCTTGATGGGATACCC 58 NA Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 3 2 2 96 3L 20478512 20478598 TATCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0078332 3 1 4 103 3L 20959003 20959239 AGCTGGATAAGGAACAAGGA 58 20958919 20958939 TTGAAACGAATGGGTACATCC 58 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078303 2 1 4 82 3L 21208139 21208157 CAGTCCAACTCCTCATCCA 58 21208201 21208481 TGACGATGTTTCAGTGAATCG 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413 2 1 3 112 3L 21266784 21272587 TAGCCTACTACTGGGAGGG 59 21266690 21266708 AATGCCATGATCCTTCAGC 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678,FBtr0112677 2 3 3 125 3L 21326357 21326461 TTTAATAGGCAACAAGGCCG 59 21326549 21326567 ACATTGAGTCCCGTCTTGG 59 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 2 2 2 72 3L 21807935 21807954 ATTTACATGTGAAGGCTGCA 58 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486 3 1 2 118 3L 22063958 22063976 CAAGTCTGCCAGCAAACTG 59 22063253 22063881 CCTTCATTAACTGAATGAGCTCTC 59 NA Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 1 1 1 97 3L 22253737 22253757 CATATTGATGATACAGCGCGA 58 22253410 22253428 AGTGTGACAGCCAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 1 3 3 80 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 3 4 4 116 3L 23560302 23561655 TACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 2 6 21 174 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 1 4 4 175 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078780 1 1 3 127 3R 1083830 1092479 ATGGGATCAGGAAGTGAGC 59 1092570 1092588 TCGTTGAGGATCTTCAGGC 59 NA Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 3 2 2 124 3R 1185797 1185815 CTCCCGTTACAGTCATCTG 57 1185263 1185710 GCAAATTGCGAATATCACCA 57 NA Drosophila melanogaster 61 CG34277 FBgn0085306 FBtr0302422 1 1 1 227 3R 1196127 1196145 CCAATGTGACCGCTAATGG 59 1196398 1196416 TAAACTACGGCTTATCGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 2 2 2 95 3R 1476893 1476979 CAGTTGATTCGTCTGTGCC 59 1477038 1477056 GAATTGCGGGAATAGGCTG 59 NA Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 3 2 2 195 3R 1561044 1561063 TATCTGGATGAGTTCGACCG 59 1560807 1560886 ACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 2 3 12 92 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 1 5 5 85 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 2 2 4 82 3R 2479836 2480204 GGATGAAGATCTCCAATGCTC 58 2480248 2480266 TGTTCTCGTCTTCGGAGAC 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184,FBtr0302183 3 2 3 83 3R 3017841 3018221 CGCAGTCATCAAGTAATCAGC 59 3018266 3018284 CAGCTGCAGTACCAAATGC 59 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 1 2 2 95 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322511 3322529 CTGTAACATTCCCGTGAGG 58 NA Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 2 2 2 85 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365153 3365171 GCACTGGAGCTCTTTACAC 58 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 3 4 4 92 3R 3848737 3848755 TAATTGCCCGGATCTCCTG 59 3848602 3848681 ACAGATGCCAAGTTGACCA 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 3 3 3 80 3R 4068292 4068418 AATCGTATTATCGCTAGGTACTCC 59 4068235 4068253 CTCCATCTTCGGTACCACC 59 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 3 3 3 139 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 3 1 1 61 3R 4621854 4621875 CCCAGATGTACGAAATGATGAG 59 4621947 4621968 GTGATACTTCTCCAAATAGGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081921 1 1 2 80 3R 4650604 4650688 TGACACGGATCATCCTAAGC 59 4650728 4650749 TTGGACTTCTTAAAGATCCCGT 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 3 2 2 61 3R 5091840 5091861 TTAATAACCTGGAATTCGTGGG 58 5091742 5091762 CTGGATGCGAATGATGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 1 3 3 81 3R 5161906 5161925 CTGTTCTCGCTTATCATGGC 59 5161969 5162217 TCCTCTCGTATTCCTTGCG 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 2 2 4 60 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515750 5515771 GCTAGAGGAATAAAGTGAACCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 2 3 4 71 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520884 5520902 CGATAGAACTCCGACCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 3 2 2 164 3R 5566738 5566758 ATGACTCTGGTCTATCGACAG 58 5566940 5566958 TCTTCTTGCCATCTTGGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 2 3 6 80 3R 5930727 5930805 GTGTTTCGAATCAAGATCGCT 59 5930667 5930686 GAACACAAAGGGTACATGCG 59 NA Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 1 2 2 80 3R 6030890 6030979 GGACTACGTTGTGCAACTG 59 6030828 6030849 TTGATGTGAACTTTGTAGGTGG 59 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 1 2 4 80 3R 6589612 6589632 ACTGTTGCTAATCGATTCAGG 58 6589671 6589890 TGGCGTTGATCTTCTAAATCTG 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 1 6 7 179 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082456,FBtr0082454,FBtr0082452 1 5 6 61 3R 7418089 7418107 AACAGTGGCTCGAGATCAG 59 7416987 7417005 TTGGCTACGACCTTGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 2 3 3 92 3R 8825929 8826123 ATGCTGACATACATTCTGGAC 58 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300072 2 1 2 80 3R 8869551 8869571 ATATTGTCGCAGTGAACTTCC 58 8869681 8869945 TTTGCTCTTCCTATGGATGC 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 2 4 6 154 3R 9203380 9203626 AAGATAACGGCCAAGAACG 58 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 1 5 5 60 3R 9210262 9210281 GGAGGTTGACATTCCAATCG 59 9210393 9210412 TTGCTTGGGATCAAAGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 88 3R 10634007 10634092 ACGTTAAGGTGTATCTACTGC 57 10633939 10633957 GTCGAAGATGGGATTCAGC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 3 3 7 81 3R 10653003 10653268 GTTCTTGGACCATATCGAATCC 59 10652943 10652961 TGCGGATATAGGTTGTCCG 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 1 2 2 166 3R 11183846 11183864 GCTGCAGAAGTACCATTCC 58 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 2 3 3 91 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191419 11191502 CAGATTAATTTGCTCGTTGCTC 58 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 2 2 2 93 3R 11249454 11249475 CAGGTGAATGTCAAGTATGAGG 58 11249256 11249401 TGTCCAGGTTCTTCTCTGTG 59 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152 2 1 2 88 3R 11366515 11366533 TTTGAGGCTCTGGATGTCC 59 11366253 11366463 ATGAGGAAGCCGAGATACG 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 3 1 1 121 3R 11659805 11659826 GAAATGGACAATGATGAACAGG 58 11659604 11659622 TCGGACTCGTAATGATGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 1 3 3 80 3R 11742175 11742195 GAGGAGTGTCTTCCTATTTGC 58 11742055 11742134 GTCGCTCAATTACCGATAGG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0301655 3 2 8 112 3R 11777547 11777565 GATGACGACAAGTCGAGGT 59 11779948 11780314 TTTGTGGTAACCTGTCCGA 58 NA Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 1 2 2 80 3R 12265066 12265342 CAATAGAGGCATCAAGAATGAG 57 12265007 12265028 AAGGCTGTCTTATAACTGAAGG 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 2 3 3 108 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636027 12636045 GGAAGCGAGTGTAGGTCTG 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 2 4 7 60 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834615 13834634 TTCCAAGCGAATTGTTTGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083606 2 1 2 80 3R 14065821 14065899 TGGGAGTTCCCTACAAAGTC 59 14065760 14065779 TCTCCAACGACTCACTAGGA 59 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 1 5 5 103 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083764,FBtr0110919 1 4 8 80 3R 15310649 15310765 GACTCCGATAGTGATACGAGTC 59 15310806 15310824 TGATTCCAGGACCTTGCTC 59 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 1 4 4 80 3R 15444448 15444530 CATGAACACAGAGCTTAACTG 57 15444388 15444407 ACGGAGCCAATAAAGAACAG 58 NA Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 3 2 2 89 3R 15697486 15697576 AGATCGGTTTCCGAGTCAC 59 15697415 15697433 TCTGGTTATCGCCTTCCTG 59 NA Drosophila melanogaster 61 CG4323 FBgn0038797 FBtr0083891,FBtr0083892 2 2 2 80 3R 16326651 16326670 CTGCAGATCTGATCAACGTC 58 16326273 16326610 CTATGGCGTGCTTATAGTTGC 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 3 4 4 127 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450606 16450774 GGTGGAGAAACTTTGTGCG 59 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0114503,FBtr0083931 3 2 2 61 3R 16564041 16564325 TGGCTCCAGAAACTATCCC 58 16563998 16564016 TTCTGTATCCACCACGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 1 1 1 84 3R 16876613 16876631 CCAAGTTTGGGACAGTTGC 59 16876486 16876505 GAATCCTGGTGACTGTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 2 3 16 94 3R 17010983 17011003 CTTGATGTGCAATCCTTACCA 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084069 1 1 22 81 3R 17200835 17200854 CAACAGTCCCAGAACTACAG 58 17183078 17200791 CAACAGAACCTTGAGCCTC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084076 1 1 22 80 3R 17180409 17200792 AGAGGCTCAAGGATGTGAC 59 17180347 17180367 ATTTGATGATTCGCTCCTGTG 59 NA Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874 1 1 2 93 3R 17786622 17821252 TATTGTGGCCCTAGAACGC 59 17821308 17821327 GATATTCAAGTGGCTGCACG 59 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 2 2 2 79 3R 17840999 17841017 TCTCACGAATATCCAGCCG 59 17841133 17841151 ACTTCTCGTGCTTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 1 2 2 134 3R 17845755 17845839 CTAAACAGGGCCAGGTACC 59 17845639 17845657 CTGAGTCTCCAGCATGAGG 59 NA Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 2 2 2 60 3R 18189837 18189927 ATCAGCTATCAGATTAAGAGCC 57 18189948 18189966 AGAAGATGAACTGCACCAC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 2 2 2 175 3R 18205912 18205987 CGATTCTGAATGGAAGACAGAC 59 18206122 18206141 ATGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 2 4 4 147 3R 18446765 18446783 AAGAAGTCCACTAGCAGCA 58 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 1 2 2 80 3R 18918206 18918225 GACGAGGGAATCTCTAGTGC 59 18918266 18918339 GATCTTGAAACGAAGATGCCA 59 NA Drosophila melanogaster 61 CG12268 FBgn0039131 FBtr0084513,FBtr0084514 2 2 2 90 3R 19769945 19769963 TTCTGCGTCATCTTCTTCC 57 19769815 19769893 GGACATTGAGTAAGAATGGCT 58 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 2 4 5 80 3R 19805168 19805245 CATAGCTCAGGGTGGTCAC 59 19805289 19805307 CTCTGAATCCAGGGCTCAC 59 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504 2 1 2 81 3R 19821992 19822842 TACTAGTGCCCTACGATGC 58 19822885 19822905 CCTACAATCAAAGCCCAATGG 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 1 3 5 102 3R 19839340 19856223 ATCCCAAGACTCTGTTCGC 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530 2 1 2 105 3R 20118599 20118618 TAAACAATCGATCTCGGCAC 58 20118686 20118863 AGGTTACTTCCATCTGGGC 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0084631,FBtr0084630 1 2 4 163 3R 20173306 20173393 CAATCAAGCTCTCAAACGC 57 20173161 20173180 CATAAGAGGACTGCGAAGAC 58 NA Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 3 1 1 246 3R 20355999 20356017 TTCCTACTGCGACAAGTGG 59 20355710 20355728 CAAACTGTCGGTCATCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666 2 2 3 81 3R 20464514 20464535 ATTGTGTCCTACACCAGTAGTC 59 20464387 20464477 CATTGTCCACGAGTATCTTAAGAG 59 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 1 3 3 80 3R 20699676 20699836 GGATGCTAAATACGTATGGGT 57 20699616 20699636 AAGTTGTCCAGTGGAATAAGG 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 145 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898161 20898179 ATTGGATAGCAACAGCGGT 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 3 4 7 93 3R 21575099 21580074 GTTTATAGAGGCCACTTGCTC 58 21575026 21575044 ACAATCGCTCTCCTGATCG 59 NA Drosophila melanogaster 61 CG14550 FBgn0039405 FBtr0084974 1 1 1 118 3R 21883920 21883939 TGTGAGCATTTCAGATTGGT 57 21883758 21883776 ACTTTGTAGGCGATCTCGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 2 3 9 95 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 2 2 9 84 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699706 22699793 TGTAGCCCGTATATGCTACG 59 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 1 2 3 186 3R 22886860 22887128 CAATCCAACAAGGAGTGCC 59 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085140,FBtr0085143,FBtr0085139 1 7 12 121 3R 22892190 22892337 ATCGGATACCTTTGTCTTCCC 59 22892089 22892107 GTTGGCTTTCATCCTTGGC 59 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155 1 1 3 80 3R 23080442 23080812 AATCCAAAGAGCCACAAGG 58 23080854 23080874 GATATGTTGGTGTGATGTGAC 57 NA Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 3 2 2 111 3R 23094416 23094503 TTTCTGGCACCACATTTCTG 59 23094324 23094343 TTTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085249 2 1 3 134 3R 23755063 23755713 CATCCAATGAGCCCAAGAC 58 23755810 23755829 CAACATATGGGAAGAGCACG 59 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 2 4 4 110 3R 24146990 24147102 TGAAACAGGTCAACTGTACG 58 24146899 24146917 AAGCTCTTCAGGTACTCGG 58 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0085287 3 2 3 117 3R 24166353 24166371 AGGGTGTGATATTCCACCG 59 24166452 24167103 AAGCTCTCATCCTCGAACG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 2 6 6 66 3R 24426902 24428497 GTGGACAAAGTTGTGTTGCA 59 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 2 2 4 83 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940205 24940226 GTGGACTTTCAATTATGAGGCT 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 3 2 10 107 3R 24962332 24962351 GTGTTATTCGTCCTGGTTGC 59 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 1 4 4 165 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 3 4 4 166 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617666 ATTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 2 4 5 82 3R 25653847 25653868 CTCATATGCTCTGTAAGAGACG 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 3 2 2 98 3R 25873355 25873436 AACGCATTCAGGTATGTGG 58 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 2 4 5 82 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211909 26211927 CCTTGATCTCCAGGTCGAG 59 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684 3 1 2 83 3R 26339734 26339753 GGTACTCCTTCATTCGTCAC 58 26339618 26339689 TCAACTCATCACGAATCACG 58 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085681 1 1 3 90 3R 26345393 26345411 GAGCTACAAACAGTGGCTG 58 26344287 26345341 GTGCATGGACTCTTTATCCAC 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 2 6 12 139 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397642 26397662 CAGTATGGTTATCTCCTCGGG 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 3 6 12 140 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397643 26397663 CCAGTATGGTTATCTCCTCGG 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302181,FBtr0302180 1 2 3 80 3R 27663682 27663705 ATCTGTATCAATCAGTAGTGGGTC 59 27663743 27665614 CCAATTGATAGGGCTGTTGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 3 3 22 144 3R 27757911 27757929 TGTATCTGTGCCGACACAG 59 27707585 27757803 GCTTCCGCGATTATTGGTC 59 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 2 2 4 98 3R 12571211 12571231 CCAATATGCTTCGGTAATCGT 58 12570412 12570433 TCCAATGGGAAGTGATAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 1 4 8 80 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162747 162839 CAGATGAACCCAACAAGTCAC 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 3 6 6 81 4 302513 302589 TCTTCCTTTATGTCAGGTTGAC 58 302453 302471 TCCGCATTTATCCTTTGCA 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0089793 2 1 3 82 4 748859 751409 CTAAACTTCGACAGTGCGAG 59 751449 751472 CCTGATTCATTTGGGATGATTCTC 60 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089194 2 1 3 109 4 1153190 1154509 ATATCCTAGGGCAACCTCG 58 1154579 1154600 GTTCAACTGTTAGAAATGCAGC 58 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 2 2 4 80 U 1352553 1352571 CAAATTCGTGGTACGACGT 58 1352614 1352685 TTGAATAACCGTCCAACCTC 57 NA Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 3 2 2 81 X 94979 95061 GATTCCTGAAGACACTCCCT 58 95105 95123 GATCTTAAAGCTGGTGCGG 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 85 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398965 TAATCGCCCTCAGATAGCTC 58 NA Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070240 1 1 3 80 X 1189961 1190399 GCTGCGATTGTACTCTACAG 58 1189900 1189920 GCAATATCTCTGTGTTTGCAC 58 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 1 2 3 83 X 1365310 1365329 TTTAAGGACTTCGTGTACCC 57 1365375 1365452 AACGTAATACTCGTGCGAG 57 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 2 3 3 95 X 1376772 1376790 CGTCAACATCCTCAACCTG 58 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070262 2 1 9 87 X 1531147 1531165 CAATATCGATCCCTCAGCG 58 1531360 1536928 CGTCAGTTTACCTTGAGGG 57 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 2 2 2 283 X 2011721 2011739 CAAAGACGTCAGCGATGAG 59 2011393 2011411 CTTCATCCAGTCTGTCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 3 2 2 157 X 2014215 2014233 CTTGGTTCTGGCAGAATGC 59 2014015 2014097 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 2 3 3 81 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372229 4372247 TCAGGATGTCATTGGCTCG 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 1 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070740 3 1 5 95 X 4959934 4960111 AATAGTCTCGACGCCTACG 59 4960170 4960188 AATGTTCTGCGCAAAGGTG 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 1 3 4 80 X 5214528 5214601 CAAATAATGGGCTATCCGGG 58 5214467 5214486 ACCATTGTATTCGCTTTCCA 57 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0089393 2 1 2 89 X 6014328 6014347 GCGAGAAAGTTAACGGAGAG 58 6009596 6014276 GCGTCAGTATCTGGAACAC 58 NA Drosophila melanogaster 61 CG14442 FBgn0029893 FBtr0070988,FBtr0300772 3 2 2 139 X 6586548 6586566 AGATCTATGGCGATGAGGG 58 6585379 6586445 GTTGTCCGACTGAAGTTCC 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 2 5 6 106 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 ct FBgn0004198 FBtr0071069 1 1 3 89 X 7526293 7526311 CTACCGACGTATTCCGACC 59 7526359 7526805 GTGGGAGTATTACCAATCAATTGG 59 NA InUTR Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 2 1 2 116 X 8353407 8354809 CATCAGTTGTGGCATGACTC 59 8353310 8353328 AGGCTCAATGGATCTGTGG 59 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 1 3 3 86 X 8488874 8488955 ACCTTCATCGAATGGTTCTG 58 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 3 2 2 132 X 8762244 8763251 GAGCTGGAGACCAGATTGG 59 8763347 8763365 GCAGTTGGTGATGATGGTG 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 1 2 6 92 X 8917821 8918118 GGATTCAGCCCTATACTGGA 58 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 2 2 6 93 X 8917820 8918117 TGGATTCAGCCCTATACTGG 58 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071294 3 2 6 118 X 9003012 9005127 AATCGCAGATTTAATCCAGCC 59 9005450 9005468 CGAATCTGTCGGATGAGGT 59 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 2 3 3 81 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148065 9148156 AGTGAGCAGATCAGAGTCC 58 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 3 2 4 80 X 10120335 10120353 CCCAGTCTGACCATATCCG 59 10120395 10120558 ATGGGCATTATCATAGGTGGT 59 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 3 4 4 136 X 10672153 10672255 ATATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267 1 1 2 149 X 10835508 10835528 CGAGGATTTCGAAGATCTTCC 58 10835639 10835766 AATGTTTGTGGATGGCGTG 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 3 2 4 81 X 11329461 11329480 CGAATCTGGATGATTCGGAC 58 11328831 11329418 GTTATTGGCGTGGGATACTC 58 NA Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 1 1 2 162 X 11336697 11336715 CTTTACGGTGAACAGCGTC 59 11337699 11337717 TTCCACCATTTCCCATCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 3 4 4 141 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698359 11698377 GGTCAACTGATTCTTGGCG 59 NA Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 3 2 2 81 X 11980915 11980933 CACCTATCAAGTTTGGCGC 59 11980784 11980872 CTTATGCAACGACTTATCGGG 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 3 6 7 118 X 12168166 12168184 TGGCAATTGCCAGATAAGC 58 12168265 12170555 CTATGTGAAACCTGGATGGC 58 NA Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073669 2 1 2 117 X 12355850 12355869 GCTAAAGGTTCTACTGGTGG 58 12355696 12355771 GATATGAGATGTGCAGTCGT 57 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113444 1 1 2 108 X 12499326 12499344 CAACCTGGACAAGCAACAG 59 12499416 12499848 GATTCTCATTGGGCTCGTC 58 NA Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 2 2 2 80 X 12837476 12837559 TATTTCTGGTCTATCGAAGGGT 58 12837600 12837618 TTCAACTCCTGGATGGCTC 59 NA Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 3 2 2 80 X 13582343 13582362 GATACTGCAGTCCATTCTGG 58 13582186 13582301 CTGTAGCCACAAACTTCCAG 58 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 1 4 4 80 X 13726825 13726846 TATCCAGATATGAGCCAATTCG 58 13726694 13726784 GCAGAAGGATTTCAATGGC 57 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 2 8 8 130 X 14825229 14825248 AAGCAGATCGAGATTGAGTC 57 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0074008 1 3 4 123 X 15232717 15232735 TACTTGGCGGAGAACAAGG 59 15232954 15233674 CTCCGCTGTCTAGTGATCG 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 1 3 3 80 X 15276621 15276641 CTCTCCATGAACAACATACCC 58 15276371 15276581 ACTATGAAAGCTGGGAAACTC 58 NA Nonspecific Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074089 3 1 2 81 X 15650535 15650614 TTGCAACCTAAGCTTTGCT 58 15650659 15650677 CCGTTGGATCTTCCTTCAG 57 NA Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 3 2 2 95 X 15820922 15820940 GAGATTCACCACGACCCTC 59 15820994 15821423 GTGTATCCATAGCTCTCAATTTCC 59 NA Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 3 2 2 80 X 15875693 15875779 AAGATATGCTACTCGGAGGAG 58 15875633 15875651 TAGTGGATGGTCCCATTGG 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 1 4 4 80 X 15975871 15975890 CCAAATGAACTTTCCGTGTG 58 15975307 15975831 GTAAAGAATCTTTACCGCTCCT 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301 2 1 9 115 X 16270191 16270283 CCCACCTACAAATCGATTTCG 59 16270358 16270690 CCATTCAGATACCACTGTTCC 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 3 2 3 80 X 16323430 16324662 TAACAGTCTATCCACTGCCT 57 16324701 16324723 CTATGGACTTCATCTGATAGTCG 58 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281 2 1 3 149 X 16344623 16345315 AGGATACAATGATCGGCCG 59 16345428 16345446 AAGTTGTTGTAGCGATCGC 59 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 1 2 2 146 X 16828340 16828359 CTATTTGACGCAGGTTGGAC 59 16828468 16828910 CTGGAGAGGACCAAACTGG 59 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074384 3 1 3 80 X 16995404 16996435 AATCAGTGTTGTTAGCAGCAG 59 16996474 16996495 GGTTATTTCCAGTGTTCTTCCC 59 NA InUTR Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 1 4 4 229 X 17198190 17198208 CAAGTGAATGCTCAGCAGC 59 17198401 17198746 ATCATCCAAATGGCATCGC 59 NA DesignRelaxed Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998 3 1 3 168 X 17461453 17461471 GCTATAAGCGTGAGGTCCT 59 17461243 17461322 ATTTCGTAAAGCTCTTGGCG 59 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 1 2 6 80 X 17784698 17790570 TTCACCCAGGCATATAGCA 58 17790614 17790632 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 2 2 2 142 X 17984260 17984357 GTCAAATGGAGTGAGCCAG 58 17984136 17984154 CACTTGATCGACGAGATGC 58 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 2 2 2 127 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092799 19093310 GTATAATGTTGTAGACGCGGC 59 NA Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 2 2 2 60 X 19173016 19173036 GTCTACCTATTTGAGCTGGGA 59 19171980 19171999 CTCCAATGGCGATAATGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 3 4 5 80 X 19905586 19920747 CTACTTTCTGGTAAATGGAGCC 58 19905527 19905548 GTAGAGCATATCACATCCATGG 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 3 5 8 84 X 21247627 21247645 GCTAATACGCGCCTATCTC 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 1 2 9 96 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499695 21499713 TAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524 1 1 5 80 X 21906876 21906894 CACAGGACATTGTGAAGGC 59 21906938 21907006 TGGTAAGGTCCAAGCTTGG 59 NA Drosophila melanogaster 61 tRNA:N5:42Ac FBgn0011933 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-5 FBgn0046820 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-9a FBgn0067680 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:84Dc FBgn0012000 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR33536 FBgn0053536 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-13b-1 FBgn0046829 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:12Ed FBgn0011951 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S774:12Ec FBgn0011980 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U3344a FBgn0086049 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17599 FBgn0031196 FBtr0077363 2 1 1 131 X 21945966 21946050 AAGGATGTGCGAGATCTGG 59 21945853 21945871 TAGCCATTGAAGGAGCTCG 59 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100652,FBtr0100651,FBtr0077352 2 3 5 137 X 21887459 21887784 ATTGCTTCAACAGCTCTGC 59 21887885 21887903 AATCGGCGATGTTTGAGGA 59 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 2 2 2 81 X 20348720 20348738 ACAACAATGCCAAGTACGC 59 20348586 20348677 CGCTCAAAGACCTTATTGGTG 59 NA Drosophila melanogaster 61 CG12703 FBgn0031069 FBtr0074795 2 1 1 80 X 19652300 19652387 GCGTGACCAGATCATTTATCC 59 19652428 19652447 AGGTAGTGCATGAGATCCTC 58 NA Drosophila melanogaster 61 CG14229 FBgn0031059 FBtr0074753 3 1 1 80 X 19588892 19588974 TCCTGAAGACAAGAAAGCG 57 19588830 19588848 GATTCAGGTTGTTGATGCG 57 NA Nonspecific Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 2 5 5 80 X 19457157 19457177 CATCTCCAAGTACCAAATGCT 58 19457035 19457116 TCCTTCCAAATCTTGCACAG 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074713 1 1 8 158 X 19389566 19389584 AACTTCTAATTCGCTGCGG 58 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14194 FBgn0030996 FBtr0074671 3 1 1 101 X 19089024 19089102 GCTTTCAGGTGGTCATCTG 58 19089163 19089185 GAACTATTAGCGCCAGAATAGAG 59 NA Drosophila melanogaster 61 CG6617 FBgn0030944 FBtr0074615 3 1 1 199 X 18544122 18544200 ACTACTTGGTCACAGAGGG 58 18543941 18543959 GAACAGATAGCGATCGCTG 58 NA Nonspecific Drosophila melanogaster 61 CG6847 FBgn0030884 FBtr0074505 2 1 1 110 X 17816187 17816267 AAATATCCGAGAAAGACGATGC 59 17816338 17816356 ACTTGTAGTGCAGGCTCAG 59 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 3 2 2 153 X 16828468 16828910 CCAGTTTGGTCCTCTCCAG 59 16829027 16829045 AAGATCTCATCCTCTGGCG 59 NA Drosophila melanogaster 61 RSG7 FBgn0024941 FBtr0074350 2 1 1 91 X 16736028 16736046 CAACTGACGCGGATTATCG 59 16735889 16735974 TAGTAGGCAACCAAAGCCTC 59 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 3 2 2 193 X 16693340 16693358 TTCGATCTGAATGTTGCGC 59 16692942 16692960 GAGCCTTTGTTCTTGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 r FBgn0003189 FBtr0089734,FBtr0089733 2 2 2 113 X 16554497 16554582 AGTTTCAAGCACAAGATGGAG 58 16554657 16554675 ATTAACTCCGTGTTCGGCA 59 NA Drosophila melanogaster 61 CG9782 FBgn0030763 FBtr0074288 3 1 1 208 X 16510368 16515371 CTTCAACATCTGCCTGCTC 58 16510178 16510197 TTTCCTCGTCATACTCCTCG 59 NA DesignRelaxed Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 3 1 1 126 X 16506614 16506632 TGGTGATGGAGTACCTCGA 59 16506722 16507572 CCCTGTGAGTGCAAATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15916 FBgn0030704 FBtr0074117 3 1 1 60 X 15784978 15784996 AACAATCGACGCATGTCTG 58 15785017 15785038 CCAGAATATCAGTGATGTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15602 FBgn0030694 FBtr0074097 2 1 1 109 X 15694062 15694138 CCTATTCAACGACAGCCTG 58 15694207 15694229 CCAGGTTCTCATCAATATGATCC 58 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290064 3 1 5 90 X 15265709 15272230 AATCCATCTGGTGATATCTTCG 57 15265640 15265658 CTTGGTGCTTCTGGATGTC 58 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290064 1 1 5 80 X 15272272 15272290 TTTCCAGGACGCTACAGTC 59 15265710 15272233 GAAGATATCACCAGATGGATTTGG 59 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967 1 1 3 100 X 14966671 14967381 AAATGACATGCCAGTTCCC 58 14966589 14966607 CATTTCGATAGACGCGACG 59 NA Drosophila melanogaster 61 CG9521 FBgn0030588 FBtr0073985 2 1 1 60 X 14746259 14746279 ATTATGGTTCAAACCGAGGGA 59 14746219 14746238 ACACAATCACCTCCTTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14410 FBgn0030583 FBtr0073948 1 1 1 60 X 14731079 14731099 GAGTATCCCAATGAAGAGCAG 58 14731119 14731139 ATTGAGCGGGATTTCTAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0114621,FBtr0073990 2 2 4 110 X 14725203 14725221 GCAATGCCCTCAAGATGTG 59 14724367 14725129 TCTCGTAGTATGGCCTGGA 59 NA Drosophila melanogaster 61 CG15890 FBgn0030576 FBtr0073939 1 1 1 84 X 14652485 14652503 ACATTGAGAGTCCTGCCAG 59 14652358 14652443 GGTACATCCATAGGAATATGAAGAC 58 NA Drosophila melanogaster 61 CG12540 FBgn0030570 FBtr0073929 1 1 1 197 X 14390355 14390582 CAGGAAAGTTCAACGCGTC 59 14390743 14390761 GTAAACCGACGAATCGCAC 59 NA Drosophila melanogaster 61 CG11590 FBgn0030545 FBtr0073899 3 1 1 60 X 14094664 14094685 AAGTCGAGTCTATCTACAAGTG 57 14094703 14094724 ATCAACAGATATTCGGAGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11590 FBgn0030545 FBtr0073899 1 1 1 60 X 14094619 14094639 GCATCGTTGAGTTGAAATTGG 58 14094659 14094679 TAGATAGACTCGACTTGGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13403 FBgn0030544 FBtr0073928 3 1 1 150 X 14085753 14085925 AAGTTCCCGCAATGAACTC 58 14085621 14085639 GGATACGAGGAGTAACCGG 59 NA Drosophila melanogaster 61 CG12481 FBgn0030542 FBtr0100281 1 1 1 60 X 14081409 14081427 TCAATGTGACCACAAGCAG 58 14081451 14081469 TGATAACGCATCGGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12177 FBgn0030510 FBtr0073846 3 1 1 97 X 13573998 13574016 CATCACCACAATGGGATGC 59 13573325 13573939 ATATGGGAATATCTGTGCGCT 59 NA Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 1 2 2 60 X 13200438 13200458 GTTAGCGACTATTCGGATGAC 58 13200477 13200498 AGTATTCCATTTCCTCCATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 REG FBgn0029133 FBtr0073730 2 1 1 135 X 13106868 13106886 GTGGATGTCATCGTCTCTG 57 13106982 13107200 TAAGTAGATTGGAATCCTCCAC 57 NA Drosophila melanogaster 61 CG32651 FBgn0052651 FBtr0073672 3 1 1 60 X 12300873 12300893 GTGCAACTGAGTGAAATTCTG 58 12300833 12300854 CCCAAACTAATGTTAATCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12721 FBgn0030373 FBtr0073637 2 1 1 60 X 11966680 11966703 GATGTGATGATCGATATGATGGAG 59 11966643 11966661 CCTTGTGCGTTAGGTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 1 2 2 81 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924721 11924739 GCTCAAATGGAATGCCTGG 59 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073527,FBtr0073526 3 2 2 89 X 11581655 11583238 CCAAAGAGTCTTCGTTCCG 58 11583291 11583309 GATCCTCGATGGTCATCGA 58 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 3 3 3 81 X 11498696 11498778 ATACATTTCCAGGACGATCCC 59 11498821 11498839 TGTAGATGAACAGGGTGGC 59 NA Drosophila melanogaster 61 Kmn1 FBgn0027259 FBtr0073541 3 1 1 128 X 11466324 11466343 ATCTATCGAGCGGTGATCTC 59 11466157 11466234 GATCCCAGATATCGTCCAGG 59 NA Drosophila melanogaster 61 CG33235 FBgn0030307 FBtr0073545 1 1 1 60 X 11384137 11384161 CGTACTTCCAATAATAAGAGTGTCC 59 11384101 11384121 CTTTGCTACCTTGATTACGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sisA FBgn0003411 FBtr0073461 3 1 1 67 X 11215993 11216011 TCTGGTTCGGATGTCAAGG 59 11215944 11215962 TTGTTGTAGCGGGATTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sisA FBgn0003411 FBtr0073461 1 1 1 63 X 11215989 11216007 GTTCGGATGTCAAGGATGC 59 11215944 11215962 TTGTTGTAGCGGGATTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 C901 FBgn0021742 FBtr0073400 3 1 1 90 X 10860501 10860522 GAAATGAATGCCTATAGACGCA 59 10860366 10860450 GTGATTTCTCACAGGCTCG 58 NA Drosophila melanogaster 61 CG15207 FBgn0030248 FBtr0073384 2 1 1 60 X 10802059 10802079 CTCAAGGCGTAGACAATAAGG 58 10802100 10802119 AATTGAATTGCACTTGGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 3 2 2 80 X 9468297 9468394 GGATGGACCTGGAGTATTACG 59 9468237 9468257 ACAGGCAGATATTCGATCTCG 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 1 2 2 80 X 9473559 9473579 GGTACAACTACATCAATCCGT 57 9469064 9473519 CTGTCAGCACATAGATCTTGG 58 NA Drosophila melanogaster 61 RpS28b FBgn0030136 FBtr0071360 2 1 1 104 X 9448947 9449032 ACCAAACTCGAGAAGACCT 58 9449100 9449118 TTCGGATTTCTTGCCATCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 3 1 1 63 X 9103492 9103510 AAGAAGAGCTTCACCTGCA 59 9101086 9103466 AGATGAAGGCACCTTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12772 FBgn0030055 FBtr0071221 1 1 1 107 X 8573709 8573727 TACAAGCACAAGGAACTGG 57 8573798 8573884 GAAGAATGACTGCTCCCTC 57 NA Drosophila melanogaster 61 l(1)G0095 FBgn0026679 FBtr0071234 2 1 1 150 X 8450547 8450642 AATCTAATCTGCAGCGCCT 59 8450415 8450433 AGTGATTCCTTCAAGGGCA 59 NA Drosophila melanogaster 61 Tbh FBgn0010329 FBtr0089999 3 1 1 81 X 7916996 7917077 ATACCCGAAACCGAGTTGG 59 7917122 7917140 GACACCAGTACGTGGTCTC 59 NA Drosophila melanogaster 61 CG1514 FBgn0029976 FBtr0071092 3 1 1 82 X 7809911 7809929 AATCTACGTAAGCGACCGT 58 7809974 7810054 TTCCGTTGTAGTTCATGGAC 58 NA Drosophila melanogaster 61 bys FBgn0010292 FBtr0071090 2 1 1 194 X 7796324 7796408 ACTTCAGTTTGAATGATGGCC 59 7796564 7796582 GTATGTCGGCCTCCTTCTC 59 NA Drosophila melanogaster 61 Dok FBgn0029944 FBtr0071049 2 1 1 153 X 7219743 7219761 GCTACCCTAACACTGAGCA 59 7219878 7220139 ACAAGCCATCAAAGGAGCT 59 NA Drosophila melanogaster 61 CG4593 FBgn0029929 FBtr0071009 3 1 1 76 X 6908182 6908200 CAATCGACGACATACCCAC 58 6908240 6908258 CTTGTTGCCCTGAATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32732 FBgn0052732 FBtr0071039 1 1 1 82 X 6853075 6853095 GCTGTTAACACTGGAGAACAG 59 6852960 6853032 TCTACGAAACCATTGTGCAC 58 NA Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 2 2 2 140 X 6571897 6572033 ATGGCTGGCTGGAATAAGG 59 6571775 6571794 ATAATCTCCGTAGCCCAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 1 2 2 117 X 5803875 5803955 TGAGATGACCCGATTGCTG 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 Sas10 FBgn0029755 FBtr0070751 3 1 1 60 X 5212322 5212341 GCAACTCAAGGATCTGATCG 58 5212364 5212382 CTGCGGTCGAATGTATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15930 FBgn0029754 FBtr0301881 2 1 1 82 X 5210184 5210204 GAGTTCTGGTTCCACATTGTG 59 5210056 5210146 CGATAGAACCAGTTTAGATCAATGG 59 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 3 1 1 166 X 3783560 3783726 CTCTTTGGATTTGCCGCTG 59 3783853 3783874 AAACTAAAGCCACCGTAATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14424 FBgn0025644 FBtr0070563 2 1 1 203 X 2821180 2821199 GCAATTAAGTTGGTAGCCCT 58 2820667 2820688 CACGATCTTCTTGAACTTAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 HLH3B FBgn0011276 FBtr0070506 2 1 1 217 X 2575373 2575391 GTTCTGAATGGCAACCAGG 59 2575077 2575095 CTTGTGTTGGTGAACACCT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 1 1 2 94 X 2100496 2101585 GAGGTGTCACGACAATACTG 58 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3457 FBgn0024984 FBtr0070392 2 1 1 60 X 2082263 2082282 GAGGAGATACTGAGACCCTC 58 2082305 2082323 AATTAGTGGTGCCAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070337 3 1 7 148 X 1964534 1964552 GGAACGTTCTCTTAGCTGC 58 1962361 1962379 TTGTGTACTCCGAATCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 80 X 1962454 1965409 AAAGGAGAAGTCGACAGGTG 59 1962393 1962411 GTCGACATGGTTGTACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 3 3 3 97 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800183 1800204 AACAGCAGATAAAGGTACTTGC 59 NA Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070302 2 1 2 81 X 1683701 1683770 GTGGATGCAATTAGGCTGTC 59 1684199 1684222 CAAAGCATCTCTAGAGATCATCTC 58 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302028,FBtr0302174,FBtr0302175 2 4 4 80 X 1643774 1643794 GATAATTATGGACATGCTGCG 57 1642311 1643735 AAGTTACGTGATGACTCTATGG 57 NA Drosophila melanogaster 61 CG14786 FBgn0027794 FBtr0070230 3 1 1 88 X 1352351 1352369 CGACCTACACATCAAGCTG 58 1352220 1352299 CGTCAATCTGAAAGGCTGG 58 NA Drosophila melanogaster 61 CG14629 FBgn0040398 FBtr0070179 1 1 1 60 X 945946 945966 TCTTCGAGAAGTATTGCCTCC 59 945986 946006 TCGTTGAAGTTCTTCAGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11664 FBgn0040341 FBtr0070163 3 1 1 60 X 770169 770188 CCCTCTTAACATGTTCGCAC 59 770208 770229 AGCGATATGCATCAAATTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL22 FBgn0015288 FBtr0070148 1 1 1 60 X 658362 658380 CTGCACCAACATTGCTGAG 59 657010 658341 CTTGATGTACTTCTCGAAGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070124,FBtr0070127 2 2 8 63 X 550608 550626 CCATCTGTGGTAGAGTCGG 59 551147 551165 GATTGCAACTTGATGCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070092 1 1 2 82 X 387426 387444 CTAGTGCGATTGATCGGAG 57 386603 386621 ATGAAGAGCTTGGTTGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 pcl FBgn0011822 FBtr0070100 2 1 1 60 X 330949 330970 CGATACAAAGTCAGACATTCGG 59 330910 330931 GCATCTACGAAATTTGTTCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0273442,FBtr0070102,FBtr0273443 3 4 4 153 X 211944 227598 GACGAATTTCCGGAAGAGG 58 211809 211833 GTTGAACTCTAGGATGAATTCTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 2 6 6 80 4 375180 375316 ACGACTTAAAGGTGGACGA 58 375118 375138 AAACCATGGGATCAACATCTG 58 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305c FBgn0082974 FBtr0113593 3 1 1 60 3R 24429155 24429173 CGCTGTGAGATCAACTGAC 58 24429194 24429215 ACTGGGATTATCTTACATACGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphagamma-element:CR32865 FBgn0052865 FBtr0082678 2 1 1 60 3R 8302999 8303019 TTAGAGTTTAGTGGAGAGCGG 59 8301384 8301405 TTCGTACAGACATCTACTTCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 rod FBgn0003268 FBtr0085795 1 1 1 80 3R 27407609 27407629 CGTGACACGAATAAATTTGCC 58 27407666 27407749 GTGAGTGCGATAATATAGTGTTCC 59 NA Drosophila melanogaster 61 CG3669 FBgn0039838 FBtr0113313 1 1 1 83 3R 27085024 27085042 GGAGATATCGATGAGGCGA 58 27085088 27085397 GCGATTGGGATTCTTTACGA 58 NA Drosophila melanogaster 61 PH4alphaNE2 FBgn0039783 FBtr0085685 2 1 1 80 3R 26336164 26336184 GAAGGGTAACGATCATATGGG 58 26336045 26336122 ATCCACTTGCTCATAACCC 57 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 2 3 3 80 3R 26184089 26184107 TTCGATCGCTATCCACTGG 59 26184149 26185703 GTATTTAACCTCGATGCAGCC 59 NA Drosophila melanogaster 61 CecC FBgn0000279 FBtr0085616 2 1 1 128 3R 26042383 26042470 CTTGGCAAGAGAATCGAGC 59 26042559 26042580 CCTTTGATGGACATTAAAGGCT 59 NA InUTR Drosophila melanogaster 61 CG15528 FBgn0039742 FBtr0085591 2 1 1 96 3R 25875128 25875234 CCCAGAACTTTGTAGCTATTCAG 59 25875054 25875072 CAAAGGATCAGCGATGGAG 58 NA Drosophila melanogaster 61 CG15525 FBgn0039732 FBtr0085607 1 1 1 128 3R 25823186 25823204 AAACAAAGGAGGAGACGCT 59 25823014 25823032 GATTCTATGTTGCCCGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42558 FBgn0260760 FBtr0301257 1 1 1 80 3R 25759743 25759761 GTCACAACTGCATTTCTCG 57 25759805 25759972 ATCGCTGGCATTAAATTGC 57 NA Nonspecific Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 3 2 2 80 3R 25648462 25648548 TGAAATTGTGACAGGATACGTC 58 25648588 25648607 CAATCAGTGAGCATTAGCGT 58 NA Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 3 1 1 183 3R 24973601 24973689 GAAGACGTCTTTGTGAAGC 57 24973436 24973454 GTCCAATGAACAGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367,FBtr0085369,FBtr0085366 2 4 4 81 3R 24939160 24939722 GGTGCTTACAAGGTTTCCC 58 24939767 24939785 AGCCCATCTCTGTGATTGG 59 NA Drosophila melanogaster 61 CG14062 FBgn0039592 FBtr0100373 2 1 1 80 3R 24468036 24468125 GCCCTTCTATATCACCCGAC 59 24467975 24467995 ACCGTATAGCTAGCTTCATCC 59 NA Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303,FBtr0301302 2 2 2 80 3R 24314707 24314725 ATGGAGTCCTGTGACTTGG 59 24314767 24314911 ACTGAAGTTTGGTATCTCCCT 58 NA Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 2 1 1 99 3R 24109753 24109832 TCGATCAAAGCGAAAGCAC 59 24109895 24109913 TGAGTGTAGACGCTTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220,FBtr0085221 3 2 2 60 3R 23528130 23528148 GTACTATGTGACCGGAACG 57 23528172 23528190 ATTAACATACGGTGCCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18437 FBgn0039536 FBtr0273246 3 1 1 80 3R 23496650 23496725 CACCAGAAAGGTTTATGGCG 59 23496767 23496786 GAGGTGATGATAGTGGGCTC 59 NA Drosophila melanogaster 61 CG31065 FBgn0051065 FBtr0113383 1 1 1 80 3R 22990427 22990539 GCTGATGAGGATGATGAAGC 58 22990582 22990600 AACGTATCGTTGTGTTGGC 59 NA Drosophila melanogaster 61 CG31076 FBgn0051076 FBtr0085079 1 1 1 80 3R 22814878 22814958 CGAGTACTATAGCAACTACATTGC 59 22814821 22814839 TTGTAGGTGCGTTGAACCA 59 NA Drosophila melanogaster 61 CG5500 FBgn0039461 FBtr0085064 2 1 1 163 3R 22705549 22705818 AAACATAGAGATACCTCCCGAG 59 22705942 22705960 ACATCTTCAGGTTCGGGTC 59 NA Drosophila melanogaster 61 TwdlJ FBgn0039440 FBtr0114538 1 1 1 62 3R 22455835 22455853 CACCCAGTGAATCCTTTGG 58 22455879 22455897 ATTGAGATCCTTCCAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978,FBtr0084977 3 2 2 96 3R 21877374 21877395 GGACAGTAATGATTATCGACCC 58 21877245 21877317 ATCCAAGCGCTTATCATGC 58 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 2 2 2 111 3R 21694500 21695268 GAGGGATCAGGTTGATCGT 58 21695343 21695361 CGATCGAGTTACCAAGTCG 58 NA Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177 2 1 2 82 3R 21601874 21601896 TGCCAATCTCTATCCTAAGAAGG 59 21601739 21601835 TCGCTGATATCACAAAGAACAG 58 NA Drosophila melanogaster 61 CG11859 FBgn0039306 FBtr0084816 2 1 1 92 3R 21091827 21091905 GGAAAGAAATATGATGGCTACCG 59 21091957 21091975 AAAGGAACTGACCGATCCC 59 NA Drosophila melanogaster 61 danr FBgn0039283 FBtr0084780 2 1 1 60 3R 20964565 20964583 CTGCTTCCGAGGATTACAG 57 20964607 20964625 TTGGCCCAGTTCTTAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 danr FBgn0039283 FBtr0084780 1 1 1 60 3R 20964259 20964277 CACTGCCTCCAAACTACGA 59 20964301 20964319 TAATCGGCTGGACTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 2 2 2 169 3R 20767855 20767940 ATGCCATACGAAACAAACCC 59 20767705 20767725 GATAAACGACTTGTACTCGCC 59 NA Drosophila melanogaster 61 CG31105 FBgn0051105 FBtr0273357 1 1 1 80 3R 20685281 20685304 CTGGTTAGAAACATATCCCTACAG 58 20685160 20685245 CAACCAAATCAATCTTTGTCCC 58 NA Drosophila melanogaster 61 CG33658 FBgn0053658 FBtr0091637 2 1 1 87 3R 20666497 20666516 AAAGTCCAATGTAGTCGCCA 59 20666378 20666447 AATGTCGTGGTTGTACGGA 59 NA Drosophila melanogaster 61 CG31357 FBgn0051357 FBtr0084735 1 1 1 60 3R 20654661 20654679 CACTGCTATGCTCAGACCT 59 20654619 20654638 GGTTGAGATCCTCCTGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ast FBgn0015591 FBtr0084744 3 1 1 103 3R 20590650 20590669 AGTGCTCAATTCCAAATCGA 57 20587544 20590584 CTACTGCTGAGCGAATTCC 58 NA InUTR Drosophila melanogaster 61 cav FBgn0026257 FBtr0084557,FBtr0084559,FBtr0084558,FBtr0084556 3 4 4 118 3R 20048094 20048115 CTTCCTGAGAAAGTATCTAGCC 57 20048194 20048273 CCTCCTCGGTTATTCTCGT 58 NA Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0110793 1 1 2 108 3R 19754492 19754567 CGGCGAGATTATACCACGT 59 19754402 19754421 CCCATTTGGATAGTCATCGC 58 NA Drosophila melanogaster 61 CG4408 FBgn0039073 FBtr0084431 3 1 1 60 3R 19187994 19188015 AAGATACCGATTACCTTCTCCT 58 19187955 19187973 TGAACAGATCCTCGCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 1 2 2 80 3R 18918206 18918225 GACGAGGGAATCTCTAGTGC 59 18918266 18918339 GATCTTGAAACGAAGATGCCA 59 NA Drosophila melanogaster 61 CG7031 FBgn0039027 FBtr0084313 2 1 1 123 3R 18630087 18630508 GTTAATTTGCAGATGCCGC 58 18630592 18630613 CCATATTGTGATACAATGGCTG 57 NA Drosophila melanogaster 61 CG33110 FBgn0053110 FBtr0084264 1 1 1 80 3R 18398291 18398392 GGTATATGTTCTACGAGCACC 58 18398434 18398452 TATCGGAGTAGTCAACCGG 58 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 2 3 3 117 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380652 TCTTCATGTACTCGGGTCC 58 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485,FBtr0084256 2 2 2 120 3R 18304759 18304836 GCTATGATGAATCGATTGCCT 58 18304918 18304936 GTGGTTATGAAGCCCAGTG 58 NA Drosophila melanogaster 61 CG13856 FBgn0038959 FBtr0084224 3 1 1 156 3R 18228618 18228639 GGCAATAAATTGTACAATCGGC 59 18230218 18230236 GAATAGGGTCGAGATGCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407,FBtr0100089 3 2 2 109 3R 17564795 17564816 GTCGATTTCTACGATCATTGGA 58 17564645 17564728 CTGTATGCATGTTGCAATTTCC 59 NA Drosophila melanogaster 61 CG16791 FBgn0038881 FBtr0084095 3 1 1 94 3R 17160480 17163407 TGTCGACGAGAAAGGATGTC 59 17160405 17160425 TACTATCACCTTCGCACTCAC 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517,FBtr0089520,FBtr0089518,FBtr0089519 3 4 4 207 3R 16893214 16893801 CATTCAAGTGCACACCCAC 59 16893971 16893990 GACTTGAGGTCCGAGATCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 1 2 2 80 3R 16737624 16737701 GTGTTGAAGGAAGAGTACGG 58 16737563 16737583 GCCCTTTATCATGTCCTTCAG 58 NA Drosophila melanogaster 61 MtnC FBgn0038790 FBtr0083884 2 1 1 60 3R 16186190 16186208 GCCTGTAATCAGGACTGCA 59 16186230 16186250 TCTTGCAACACTGATCTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MtnC FBgn0038790 FBtr0083884 1 1 1 61 3R 16186088 16186165 AACAAACTGCAAGTGCCAG 59 16186190 16186208 TGCAGTCCTGATTACAGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0113252,FBtr0083899 3 2 2 60 3R 16152600 16152618 TCAATCACATCAAGACGCA 57 16152484 16152503 TAGTTCAACAGGGAAGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 3 8 8 80 3R 16148794 16148812 GACACTAACTCGGACTCCA 58 16148854 16148946 CAAAGCAAGTTGCTTAATGGC 59 NA Drosophila melanogaster 61 CG11391 FBgn0038732 FBtr0083789 2 1 1 80 3R 15605143 15605340 TCGAAATGCACAGCTATCTG 58 15605382 15605401 GGGTAATGAGTCCTGTTAGC 57 NA Drosophila melanogaster 61 CG11659 FBgn0038731 FBtr0083797 1 1 1 80 3R 15602169 15602250 AGGCAACTATCATCTGACCA 58 15602108 15602126 ATGGTGGTAAGCAAACCAG 58 NA Nonspecific Drosophila melanogaster 61 CG16727 FBgn0038719 FBtr0083780 1 1 1 80 3R 15440011 15440089 CATCTTGGTCTTCGAGTACCT 59 15440129 15440149 CCAAAGCAGTAGAATACAGCC 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0110919,FBtr0083765,FBtr0110915 3 8 8 86 3R 15417024 15417384 CACGATTGCATTCAGGTACC 59 15417433 15417451 CAGACAGGATCTCACCGAG 59 NA Drosophila melanogaster 61 Cyp12a4 FBgn0038681 FBtr0083731 3 1 1 82 3R 14962096 14962116 GCTGAAGGTAGACAGAAAGGT 59 14962160 14962239 TAAAGGTGCTCGATGTCGT 59 NA Drosophila melanogaster 61 CG14301 FBgn0038632 FBtr0290199 1 1 1 104 3R 14466458 14466476 TTTACCAGCTGCAGAAGAC 57 14456620 14466391 AACTGTTTCATGGCAATCAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5319 FBgn0038501 FBtr0083435 3 1 1 81 3R 13213138 13213221 AGAGTTCGACATCGATCCC 59 13213262 13213284 CATAGCATAGAATACGGAACTGC 59 NA Drosophila melanogaster 61 CG17477 FBgn0038479 FBtr0083418 2 1 1 60 3R 12952106 12952124 TGCGAGTCCATGATGTCTG 59 12952064 12952084 AAGCACAAATATGGCAAGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Actn3 FBgn0015008 FBtr0083380 1 1 1 80 3R 12803268 12803287 TTTGCGGAAAGTCAAGAGTC 58 12803152 12803228 CTTAATGTACCGAGTACATCGT 57 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 1 2 2 72 3R 12260779 12260857 TACGACAACCAACATCGAG 57 12260893 12260911 GTTGATGGGATCGTATGCA 57 NA DesignNoJunction Drosophila melanogaster 61 Mat89Ba FBgn0261286 FBtr0083275 3 1 1 80 3R 12094710 12094729 TTAGCCAGCCAAACTTTAGC 58 12094583 12094671 AGTATGCAGATCTTAGTAGTCCC 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232,FBtr0110973,FBtr0083233,FBtr0110974,FBtr0083229,FBtr0083231 1 6 6 80 3R 11895871 11895889 TGGCTTTACAGCGAATAGC 58 11895748 11895827 GGCTTTCATCACTTTCGCT 58 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 1 2 2 234 3R 11789812 11789897 AAGAAGAGATCCGCAAAGC 58 11790095 11790113 TTCGACGGACCTTCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31315 FBgn0051315 FBtr0083168 3 1 1 112 3R 11580846 11580864 AACTTCGTCTCGAGAGCAG 59 11580938 11580958 TTTATGCACTGAATCCTCGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG31294 FBgn0051294 FBtr0083198 3 1 1 68 3R 11542155 11542176 CTAATGGATGTTATGAAGCAGC 57 11542051 11542126 ACCTTTAGTGCCAGTGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 2 2 2 92 3R 11092081 11092162 GGTGCCCTTAAGTCTTTCCT 59 11092217 11092235 AATGGAAACGATCAGGCCA 59 NA Drosophila melanogaster 61 CG6974 FBgn0038285 FBtr0083042 3 1 1 60 3R 10904434 10904452 ATGGATCAGACAACCACCT 58 10904392 10904411 TCGAATAGTGCATAACGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7265 FBgn0038272 FBtr0083009 1 1 1 61 3R 10719447 10719465 AGCGTAGATTGGATTCGCA 59 10719351 10719369 TAGTCGTCTGGGAATTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 2 2 2 120 3R 10399021 10399040 TTGCCAAAGATTCTTCTGGT 57 10398848 10398938 CATAGGACGCACTTGAAGG 58 NA Drosophila melanogaster 61 ninaB FBgn0002937 FBtr0082820 2 1 1 90 3R 9527224 9527244 CGGATAACTCGATGATTTCCA 58 9527293 9527371 GTGCAGGGATTTATTCTATGCA 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 112 3R 9210299 9210407 TTGGAGGACTTTGATCCCA 58 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 1 1 1 76 3R 9089614 9089692 AACTAGATGCCCTACGCTC 59 9089556 9089574 CTTTGTCTTGGGTCGAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10126 FBgn0038088 FBtr0082686,FBtr0082687 2 2 2 81 3R 8681594 8681616 GTCTGAGGATGAAATTCTTACCG 59 8681478 8681553 CTCGCGGGTTATCTTTCCA 59 NA Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 2 2 2 85 3R 8668034 8668332 CGAATGCAAACTCTGGCTC 59 8667967 8667985 TAGTAGAATTGCCGCCAGG 59 NA Drosophila melanogaster 61 beat-Vc FBgn0038084 FBtr0082658 1 1 1 96 3R 8580414 8580432 AAACTCTTCTGCAGCTACG 57 8578332 8580355 GTGTTAGAGGCGAGTATCTG 57 NA Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 2 2 2 128 3R 8229470 8229490 CCCAAGTACTTTGAGAACCCT 59 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 CG10041 FBgn0038014 FBtr0082613 3 1 1 71 3R 8177169 8177187 TCAAACCGCTTGACATCTG 58 8176803 8177134 GAGCTCCAGAATCTCCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14740 FBgn0037988 FBtr0082552 2 1 1 128 3R 7888463 7888531 TCTTCAAGAACGTTCCATTTCG 59 7888356 7888375 CGTGCAGACACTTTATACCC 58 NA Drosophila melanogaster 61 sad FBgn0003312 FBtr0082475 3 1 1 85 3R 7703237 7703255 ATTCCAAGGGTGAAGGGAC 59 7703302 7703798 ATGTACTTATGAAGGTGCGTG 58 NA Drosophila melanogaster 61 CG14710 FBgn0037920 FBtr0299566 2 1 1 87 3R 7446056 7446132 GTAGGATTAGGGTTCGCCA 58 7446181 7446201 CGAAAGTTGAACCACATTTGG 58 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082454,FBtr0082452 2 4 6 68 3R 7417028 7418105 CAGTGGCTCGAGATCAGAG 59 7416978 7416997 GAATACTCGTTGGCTACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31386 FBgn0051386 FBtr0082359 3 1 1 81 3R 7120961 7131275 TCTTATCCTGATATTACGGAGCC 59 7113222 7113242 GTTAAGCACGAGCTAAATGCA 59 NA InUTR Drosophila melanogaster 61 RpS25 FBgn0086472 FBtr0082369,FBtr0082370 2 2 2 282 3R 7041669 7041687 CTAAGAAGGACGCGAAGTC 58 7041337 7041423 TTGATCAGACCCTTCTCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 3 2 2 137 3R 6680674 6680692 GATGACCTAAAGGTCCTGC 57 6681052 6681072 TTTCGACATCTCGAAGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0082301,FBtr0300078 2 2 3 80 3R 6638915 6639198 GATGACGATCAGATCGTGGA 59 6638854 6638877 ATCCTCACAGAATATGGTATCCAG 59 NA Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 1 2 2 107 3R 6522446 6522464 AAACAATTATGTCGGCGCA 58 6523358 6523376 CCTGTTTGCGAATCTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14688 FBgn0037819 FBtr0113215 3 1 1 87 3R 6504121 6504140 AACTGATGGTCTACGATCGG 59 6503778 6504071 ATTAGAATGCAGGTGCCCT 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 3 7 8 89 3R 6428521 6428542 ACGAGGATATTGCAATGTTCAG 59 6417172 6419281 CTTGCACCATCAGTGAGTC 58 NA Drosophila melanogaster 61 CG3909 FBgn0027524 FBtr0082172 2 1 1 110 3R 5869714 5869789 TAGCATTGCCTACAGTCCC 59 5869862 5869881 TGTCCTTCCAATGTTTGCAC 59 NA Drosophila melanogaster 61 CG12950 FBgn0037736 FBtr0082170 3 1 1 80 3R 5564587 5564607 TATGATGGTGATGAACCTGTG 57 5564435 5564545 AGCTCGAATGTCAATGCTG 58 NA Drosophila melanogaster 61 alphaTub85E FBgn0003886 FBtr0082087 1 1 1 126 3R 5558516 5558878 TGATCATCATGAGGGAATGCA 59 5558410 5558428 TTATCGGAGGGCATATGGC 59 NA InUTR Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082095,FBtr0082094,FBtr0082097 1 4 4 80 3R 5514564 5514810 CAAATTGAGATACGAATCGCC 57 5514504 5514522 ATCTCGTCCTCGTAGAAGG 58 NA Nonspecific Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105,FBtr0100537 3 2 2 60 3R 5415999 5416017 CTTCGACATACAGACCCAC 57 5415957 5415976 AAGTTGGTTTGAGTCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105,FBtr0100537 1 2 2 60 3R 5416001 5416019 ACCTTCGACATACAGACCC 58 5415959 5415977 GTTGGTTTGAGTCAGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 3 2 2 101 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226566 5226584 ACTGGTAAACCAGACGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16735 FBgn0037666 FBtr0081975 2 1 1 84 3R 5079761 5079779 CACACTTATTCATCCGCGG 59 5079824 5079893 CACCCTTATCTCTTGAGATGTG 58 NA Drosophila melanogaster 61 Ada FBgn0037661 FBtr0081971 3 1 1 60 3R 4891301 4891321 TCGTGATCGATGCAATTAAGG 59 4891339 4891361 AGTAGCTTGACTGTTATCTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8236 FBgn0037626 FBtr0081916 1 1 1 108 3R 4595634 4595654 GGACATCTACATCAGAGACGA 58 4595724 4595805 AATTTCAAGGAGCACGTGG 58 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 3 3 3 112 3R 4564427 4564515 CTAAATATCTGGAGGGCCGA 58 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 CG8202 FBgn0037622 FBtr0081914 3 1 1 81 3R 4559078 4559097 ACCCTAACGTCGAGTAAGAC 59 4559141 4559219 CCACGAAGCGAAAGATCTG 59 NA Drosophila melanogaster 61 CG9797 FBgn0037621 FBtr0081947 3 1 1 128 3R 4556329 4556404 AATTTGGCTGCGAACTCTG 59 4556219 4556237 TGGTGTAGTCTGTGAAGCA 58 NA Drosophila melanogaster 61 CG11753 FBgn0037603 FBtr0081879 2 1 1 80 3R 4479129 4479149 TTAAATGCGTTCTTAGCCTCC 58 4479189 4479277 GAAGGTGCAACTAAAGTCCAG 59 NA Drosophila melanogaster 61 ato FBgn0010433 FBtr0081828 2 1 1 60 3R 4104112 4104136 GATCTCAATACCATGTACAATGGAG 59 4104153 4104172 TTCCGTATTGTTGGTTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpA-70 FBgn0010173 FBtr0081867 2 1 1 108 3R 4089985 4090065 GTGATTGCTCGCATTATGCA 59 4089896 4089914 TTAGGATGCGATAGCGCTC 59 NA Drosophila melanogaster 61 CG10903 FBgn0037543 FBtr0081787 3 1 1 141 3R 3856792 3856874 AAATATTCCACAAACACCCGC 59 3856977 3856995 GAACGCTACCTGAGAGTCC 59 NA Drosophila melanogaster 61 CG18745 FBgn0042102 FBtr0081777 1 1 1 96 3R 3610828 3610903 TCTGAGCAGCCAAGTATCC 59 3610750 3610768 GTGTGATCCCTCGAAGGAC 59 NA Drosophila melanogaster 61 alpha-Est8 FBgn0015576 FBtr0081553 1 1 1 80 3R 3337127 3337645 CTACACCAGGGAGTTACATCC 59 3337067 3337086 GCTTCTCCCATTTGGAATCC 59 NA Drosophila melanogaster 61 Ir84a FBgn0037501 FBtr0081531 2 1 1 158 3R 3233597 3233939 GTTCAATCTCAGCTTGGCC 59 3234061 3234079 TACTGAACGTAGGGCTGTC 58 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081636 1 1 3 181 3R 2902551 2902624 AGTCTAGGTCACTGAAACCAC 59 2902767 2902785 GTTGGTTGTACTTGGCACG 59 NA InUTR Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081619 1 1 3 106 3R 2589230 2589566 AACAGAAATACCAGACATGGC 58 2589634 2589652 TGATCTGGCTGATCACTGG 59 NA InUTR Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 1 1 1 178 3R 2125041 2125059 TCAAGACAACCAGGTCGAG 59 2125201 2125685 GATCCCTCTGGAAGGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp83cd FBgn0046878 FBtr0078584 2 1 1 117 3R 1933950 1934031 CCTTTCGTTGAACGAAGGC 59 1934109 1934130 CTTGAATCGTTCTAGACGTTCG 59 NA Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 2 2 2 122 3R 1605224 1605528 CACATATCAAATTAGCCTGCTG 57 1605610 1605629 AAGATATCCAGGTGGTCCAG 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 1 3 3 80 3R 1535945 1536020 TCTTACTCCTGCATTGCGA 59 1536063 1536082 ATTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 Tim17b1 FBgn0037310 FBtr0078784 3 1 1 87 3R 1126157 1126175 TACTTCCGGAAGAAGGAGG 58 1126225 1126435 AGGTTAGTCCAGTTCTAGCA 57 NA Drosophila melanogaster 61 CG14659 FBgn0037284 FBtr0078873 3 1 1 60 3R 656850 656869 AATGGCACTGCTTCTATCCT 59 656809 656828 GTGTATATCACGCTCCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 atms FBgn0010750 FBtr0078868 2 1 1 97 3R 602438 602457 ACGGCATCTACTACAACGAG 59 602517 602594 CTTGACAACCAGCTTGGTG 59 NA Drosophila melanogaster 61 CG12001 FBgn0037265 FBtr0078861 2 1 1 86 3R 482300 482322 GGAGTACTCCGTATATCATTTCC 58 482367 482633 CCACCTCAACTGAAGTTTGG 59 NA Drosophila melanogaster 61 CG14644 FBgn0250821 FBtr0078981 1 1 1 90 3R 78083 78101 AGGAGTACCTCTCCAACCA 59 77956 78029 ATCTCCTTGATCTCGACCC 58 NA Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 1 2 2 80 3R 1902 7791 CCGTCAAGAACTTCTACGGT 59 7833 7852 TCTCGTCTCCGTTAAACGAC 59 NA Drosophila melanogaster 61 tRNA:CR32328 FBgn0052328 FBtr0072683 1 1 1 60 3L 1380246 1380267 TGTCTAGTGGTTAGGATATCCG 58 1380288 1380306 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32350 FBgn0052350 FBtr0070046 2 1 1 60 3L 23143233 23143253 ATTGCTCTTTGTTCCCTTACC 58 23143193 23143213 TATTGATATCCGGTGTGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0289975 1 1 2 84 3L 22680897 22680915 CAACATCGTCGAAACCTGC 59 22681024 22681043 GTAGGAGCCCTGTAATTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7634 FBgn0037101 FBtr0078371 2 1 1 84 3L 21560464 21560548 CGAAAGTCTATTGAAGAGGCA 58 21560591 21560612 CAGCATTCGCCTTTATTATCAG 58 NA Drosophila melanogaster 61 CG33290 FBgn0053290 FBtr0078370 2 1 1 60 3L 21535861 21535879 AGATAACAGCCGACTTCCC 59 21535900 21535921 CTTCAATCTATTCACCCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32437 FBgn0052437 FBtr0078344 1 1 1 60 3L 21351639 21351659 GCTCACATCACATTATCACGA 58 21351679 21351699 TTTCCTCCGTTGATATTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9391 FBgn0037063 FBtr0078417 1 1 1 114 3L 21260331 21260349 AGTGAATTCGGTACCACCC 59 21260174 21260192 TATTGAGAGCTGCCGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078303,FBtr0273212,FBtr0273213 1 3 4 81 3L 21208537 21208555 GAACGAATGGCCAGTTTGG 59 21208599 21208692 AGGTGACATAATCGGCTAGC 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078254,FBtr0078253 1 2 3 156 3L 20791884 20791902 TACAGAATGTTGGCCTCCG 59 20792305 20792323 TCTTGATCTCCATGCCCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078204 1 1 5 158 3L 20503002 20503020 CATTTGGAAAGCCCACGTC 59 20503211 20503229 ATCTTAAGAGGTTCGGCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0302113,FBtr0074851 2 2 3 254 3L 20233189 20233207 TTGCCTCGAACTATTACGG 57 20231001 20232971 TCACCTCCTCCACTTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 Tom20 FBgn0036928 FBtr0074903 2 1 1 144 3L 19994339 19994358 ATCTACTTCGACAAGAAGCG 57 19994526 19994960 GAAGGAAATATCTTTCGATGGC 57 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920,FBtr0302047 2 2 2 142 3L 19889936 19890019 AATCAATTTACCGCCTGCAG 59 19888054 19888073 CACTCGTTGTGGAAGTAGAC 58 NA InUTR Drosophila melanogaster 61 CG32221 FBgn0052221 FBtr0301008 3 1 1 95 3L 19828383 19828467 CAAGGAGTTACAAGAAGTACGT 58 19828523 19828541 GGTTTCACAATTGTTGCGA 57 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 3 4 4 81 3L 19635043 19635061 GTTTGCAAACCTGCATCCA 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 1 4 4 109 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG18363 FBgn0036808 FBtr0075090 1 1 1 80 3L 18690791 18690873 AGCGACGCAACTATAAGCA 59 18690729 18690749 CACCTTTGTAAAGTGCCTTCC 59 NA Drosophila melanogaster 61 star1 FBgn0036790 FBtr0089578 2 1 1 80 3L 18567772 18567790 CAGGAACGAAGTCCAAGGA 59 18567828 18567916 GAATGTATACACTTATCACCGTCAG 59 NA Drosophila melanogaster 61 CG7589 FBgn0036727 FBtr0075221 1 1 1 80 3L 17465633 17465714 CTGGAAAGACCATTTGAATACG 57 17465752 17465773 CAGGAAGTACACATAAATACGC 57 NA Drosophila melanogaster 61 CG7603 FBgn0036726 FBtr0075220 3 1 1 114 3L 17459228 17459310 GGTTCTAGGATTTCTAGTGCG 58 17459385 17459404 CTTGATGTCGTTGTACAGCT 58 NA Drosophila melanogaster 61 CG4169 FBgn0250814 FBtr0075309 2 1 1 88 3L 16577757 16577775 GAACAAACTGGTGGTAGCC 58 16577883 16577901 AGGACTCGTTTCGTGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18814 FBgn0042137 FBtr0075385 1 1 1 80 3L 16363516 16363536 GCCTTTGATGGCCATATACTC 59 16363577 16363651 GCATAATGGATGGGACTAGC 58 NA Drosophila melanogaster 61 mRpS34 FBgn0260460 FBtr0075379 2 1 1 60 3L 16341659 16341677 ACTGGTATCGGAGGAAACG 59 16341701 16341719 GGTCAGTTTGTAGTGGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32160 FBgn0052160 FBtr0075367 1 1 1 178 3L 16302589 16302607 TCTGGAGAAGTACTTCGGA 57 16302990 16303008 GCCGAGATTAGCATAACCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13050 FBgn0036591 FBtr0075478 1 1 1 83 3L 16272161 16272301 ACTGCTACTCATTACAATCGC 58 16272098 16272116 GACGGAGATGGTTCTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34451 FBgn0085480 FBtr0112757 2 1 1 80 3L 15682485 15682506 GAAATATCAACCCAGTCAACCG 59 15682343 15682445 TGATGGTGGACAAAGGACTC 59 NA Drosophila melanogaster 61 Eig71Ea FBgn0004588 FBtr0075587 1 1 1 60 3L 15642349 15642432 AAGCTAAATTGCTTGGGTTGG 59 15642309 15642327 CAGCCCTCATAGCAATGTC 58 NA DesignRelaxed Drosophila melanogaster 61 Toll-6 FBgn0036494 FBtr0075614 1 1 1 60 3L 15331474 15331492 AACCAGATAACCTCCACCT 57 15331516 15331534 GAACCAGACGAATCAGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654,FBtr0075653 1 2 2 127 3L 15121346 15121469 TAGCTCCACTTGCAGATCC 59 15121237 15121257 CATTAAACGGAGGTATTCGCA 58 NA Drosophila melanogaster 61 CG4914 FBgn0036436 FBtr0075712 2 1 1 86 3L 14670544 14670562 CAATCGCAATAATTCGCCG 58 14668523 14668541 ATCCTGGACTCGTCATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 fz FBgn0001085 FBtr0075743,FBtr0075742 1 2 2 126 3L 14268712 14268730 TACCCGTAAACACCAGACG 59 14268820 14298008 GTCATGCAGATCCTTTCCG 58 NA Drosophila melanogaster 61 CG32141 FBgn0052141 FBtr0075735 1 1 1 83 3L 14196680 14196700 GGTGATTCTTACGATTGTCCT 57 14196745 14196822 GACATAGGCACATCGTTCC 58 NA Drosophila melanogaster 61 CG8100 FBgn0036410 FBtr0075779 2 1 1 81 3L 14076898 14076916 TTTGCTTCACGAGGAACTC 58 14076961 14077078 ATATCTCCAGGTGCCTTCC 58 NA Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751,FBtr0075752 1 2 2 60 3L 13837534 13837553 TTGTGGGATGAGAAGTTCCT 58 13837575 13837594 TCCATAGCCCTGTAATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33262 FBgn0053262 FBtr0302393 3 1 1 81 3L 13129432 13129452 GCATCTCAAGATGTACACTCC 58 13129495 13129570 CAGCAATAAACTGGTGCCT 58 NA Drosophila melanogaster 61 CG11251 FBgn0036346 FBtr0075891 3 1 1 60 3L 13082880 13082899 CTTCATTCCCAAGTGGTGTC 58 13082839 13082857 ACGGAATATGTGGTTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 3 4 4 80 3L 12801569 12803316 TAAGATGGGCATTCGTCCA 58 12803360 12803378 CCGATGGGATTAAGCTGTG 58 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354,FBtr0075950 1 2 2 199 3L 12746675 12746693 GTGTTTCCTGTGCTAGTGG 58 12746434 12746513 TTAACCATGTCTTCACACGT 57 NA Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 1 1 1 83 3L 12497750 12497834 AAGACTGCACAAGGAACTG 58 12497881 12497899 TTGAAGATGTTCTCGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG12521 FBgn0040816 FBtr0076074 1 1 1 75 3L 11840688 11840706 ATCAATTCGCAAACCGAGC 59 11840631 11840649 GCTTATACGACTTGTGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7543 FBgn0036164 FBtr0076092 2 1 1 85 3L 11474110 11475772 GGGAAGCCCTATAACTATAGCA 59 11475818 11475836 CTGTCACTACCCACAACCT 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696,FBtr0302700,FBtr0302698 2 5 5 83 3L 11216596 11216614 AACTACTACCACGAAACGC 57 11216661 11216817 ATCCAGATAGGCACCTGTG 58 NA Drosophila melanogaster 61 CG14141 FBgn0036146 FBtr0076164 3 1 1 83 3L 11194699 11194717 AATATCGCGATCCGGAGTC 59 11194817 11194835 ACTCAAGATCGAAGTGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 3 2 2 139 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087227 11087301 GCAAAGTGTTCAACCTCCTC 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113419,FBtr0076290,FBtr0076289,FBtr0113418 3 4 5 138 3L 10567559 10567579 GAAATCATCTTCAACGAACGC 58 10568509 10569536 CAGTGGCGTTATTCACCTC 58 NA Drosophila melanogaster 61 CG32060 FBgn0052060 FBtr0076283 3 1 1 117 3L 10417907 10418210 CTGTTAATGAACGAGGATCAGG 59 10418288 10418306 TAGACAGCCGCATTTAGCA 59 NA Drosophila melanogaster 61 CG14180 FBgn0036003 FBtr0076467 3 1 1 90 3L 9466704 9466723 ATACAGAGTAGTAGCCAGCA 57 9466776 9467163 GATTGGATAGCCCATTGCA 58 NA Drosophila melanogaster 61 CG3529 FBgn0035995 FBtr0076461 3 1 1 106 3L 9442915 9443129 GGTAAGTAAATCGACGAAAGAG 57 9443359 9443377 ATTTGTCAAACTCCGAGCT 57 NA Drosophila melanogaster 61 CG4022 FBgn0035986 FBtr0076486 2 1 1 99 3L 9402428 9402446 CAAAGATCCTGAGGAGCGA 59 9402276 9402367 GAGTATTACGGCGTTTCTGAC 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 Hsp26 FBgn0001225 FBtr0076496 3 1 1 63 3L 9370259 9370278 CTACTCTGCTTTCGCTTGTG 59 9370215 9370233 AGTCCAAGCTCGTAGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GNBP3 FBgn0040321 FBtr0076510 1 1 1 60 3L 8949308 8949326 CAGGGAAGTGCTAAAGGGT 59 8949350 8949368 CCTGCGGTAAACTCTTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13308 FBgn0035932 FBtr0076581 3 1 1 60 3L 8801911 8801930 AATACATTTGCCTGCCTCAC 59 8801953 8801971 AAGGAGTCGATGTTCCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6638 FBgn0035911 FBtr0076651 2 1 1 118 3L 8568972 8568990 ATGTTCGGTCTGGATGAGG 59 8568816 8568893 CGCATGTCCTTGAAATTATCCA 59 NA Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 1 1 1 73 3L 8409880 8409954 AAATGCTCAATTGCGGTCC 59 8409825 8409843 GGTCAGTCGATTCTTGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Oseg1 FBgn0035891 FBtr0076663 3 1 1 81 3L 8402621 8402701 CTGGATTGTTTGACGAAGCC 59 8402559 8402578 AGAGCGGATTGAGCTAATCC 59 NA Drosophila melanogaster 61 CG32372 FBgn0052372 FBtr0076793 2 1 1 83 3L 7518781 7518800 TATCGAGTGAACTCGTCACC 59 7518840 7519203 TGGGATTGTCATCTAGATGTATCTC 59 NA Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 1 2 2 80 3L 7344757 7344777 CGAAGTTGACGGCTATATTGG 59 7344817 7344904 TCTCCGTGTACTCTTTCAGAC 59 NA Drosophila melanogaster 61 CG14830 FBgn0035755 FBtr0076888 2 1 1 84 3L 7244836 7244854 CTATGACCAGGCTGGTGAC 59 7244709 7244788 ACTGTAGCGACTGATCTCG 59 NA Drosophila melanogaster 61 Lcp65Ad FBgn0020641 FBtr0076990 2 1 1 116 3L 6136688 6136797 CTACAAGTTTGCCGTGGAG 58 6136876 6136895 CCGACATAGGCATAGGATCC 59 NA Drosophila melanogaster 61 CG13293 FBgn0035677 FBtr0077050 3 1 1 85 3L 6082557 6082636 ATTCCAGGCTGATGTCCAG 59 6082685 6082703 CGTTGCAGATGTAGCAGAG 58 NA Drosophila melanogaster 61 Txl FBgn0035631 FBtr0077098 3 1 1 115 3L 5759806 5759883 CAGGATCTAAGCCTGGCTC 59 5759960 5759980 CCTGACTGATTGTTCTTCACG 59 NA Drosophila melanogaster 61 Con FBgn0005775 FBtr0073375 1 1 1 80 3L 4952941 4952960 CTGACGTTCTACACATTCCA 57 4940096 4952900 GAATTTGTTGTCTGACACGAG 57 NA Drosophila melanogaster 61 Gef64C FBgn0035574 FBtr0073345 3 1 1 146 3L 4792480 4792498 GTGGAATCACGACGAAGTG 59 4792608 4793934 TAATTGGCACTTGGCTTGC 59 NA Drosophila melanogaster 61 CG13717 FBgn0035562 FBtr0073320 1 1 1 60 3L 4629877 4629900 GAATCCAATTAGTTACTTGGGTGG 59 4629840 4629858 GATGCTGGTGCGATTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15024 FBgn0040699 FBtr0290214 3 1 1 61 3L 4463280 4463298 TGGTGAGATCTGGCAATGG 59 4463237 4463255 CTCCAGCTCTAGTTCCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0073339,FBtr0113138 3 2 2 82 3L 4327037 4327056 CATTAGAGGCACGATGAGTG 58 4325401 4326994 TCAGGGAATTCTTATTGCTGC 58 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 2 3 3 80 3L 4082635 4084745 AAACTGACGGCATATGATCTC 58 4082575 4082594 ATCGATTACCTTCAGCAGGA 58 NA Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073177 2 1 3 60 3L 3903014 3903032 ACACCAATCCTAACAAGCC 57 3901739 3901758 AGTCTTCACAAAGATCTGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10862 FBgn0035455 FBtr0073139 2 1 1 92 3L 3654321 3654446 TTTCGACACCGACAATGGA 59 3654247 3654270 ATCCTTCAGTATCCTCAGAATCTG 59 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073145 2 1 2 83 3L 3424480 3424499 TATCTGCAATCGAGTCGACC 59 3404913 3424434 GATTGCTTTCGGTGAAGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32295 FBgn0260480 FBtr0072962 1 1 1 60 3L 2526887 2526906 GCGAGTGATAGAAGGAAGAG 57 2526846 2526864 GAGTGGAGGATGTGGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5687 FBgn0035293 FBtr0072858 2 1 1 81 3L 1935659 1935677 GAGTATCTGGGCATTCGGT 59 1935534 1935614 CCGTGTAGAAGCACATCTG 58 NA Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 1 2 2 135 3L 1821295 1821313 AACACAGGACCCATAGCAC 59 1821411 1821817 GCAACACGTAGACATAGGGA 59 NA Drosophila melanogaster 61 alpha-Spec FBgn0250789 FBtr0072789 1 1 1 80 3L 1779437 1779455 AGATCGAGAATGCCTTCCG 59 1779301 1779393 TGGTGAGGTTGCAGTAGAG 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 3 4 4 112 3L 1551788 1551869 GCTATGTGGACGAGATCGT 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 3 2 2 80 3L 368937 369018 TGAACTATGTGATCAGCAACC 58 368877 368895 TAATGCTATCCGGACTGGG 58 NA Drosophila melanogaster 61 CG13884 FBgn0035138 FBtr0072568 3 1 1 71 3L 365963 365981 AAAGGCTTTGATCTACGCC 58 365910 365928 CAGTGGAGCATCTGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34263 FBgn0085292 FBtr0112458 1 1 1 80 3L 265739 265760 ATGAGCACCAATTCTTCTACAG 58 265624 265700 AGTAATCCGGTTTCCAATCCT 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299866,FBtr0072475 3 2 6 199 3L 171972 172072 TGTGTTGTGTAATCACACCA 57 172234 172252 ATAGGTCTCAAACTCGCTG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13405 FBgn0035097 FBtr0072541 3 1 1 60 3L 74711 74731 ACTACAATCGACCTTATCAGG 57 74671 74690 ATCCGACTCATATTCGTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:HPsi FBgn0011877 FBtr0087901 1 1 1 60 2R 8224245 8224263 TCGTCTAGTGGTTAGGACC 57 8224287 8224305 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072392 3 1 2 74 2R 20826296 20826314 AATGGAAGGAGTTCGAGGA 58 20826352 20826483 AAGAGATGGTGCTCAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 pain FBgn0060296 FBtr0072417 3 1 1 86 2R 20811993 20812011 GAGAAGGCACTCTCAACAC 58 20811865 20811946 CTTCTTGTTGATGTAGTTCACC 57 NA Drosophila melanogaster 61 Reg-5 FBgn0015801 FBtr0072427 2 1 1 171 2R 20676645 20676663 AATTGGTAAGCGTGCACTG 59 20676364 20676510 GATGACCAGATCAGCTCGT 59 NA Drosophila melanogaster 61 CG4741 FBgn0035040 FBtr0072337 3 1 1 98 2R 20501484 20501563 TGATTATGAGCGCCAAACG 59 20498773 20498793 TGTTCGTCACATTGATCTCCA 59 NA Drosophila melanogaster 61 CG13564 FBgn0034973 FBtr0072246 1 1 1 106 2R 19968684 19968702 GTCACCTTGTTCTTCACGC 59 19968772 19968790 TACTGTTGATTCCAGCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 3 1 2 83 2R 19954084 19954102 TGGAATGATCCCAGAATGC 57 19953689 19953792 ATTATCCTCAATCTGGAGGGA 57 NA Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0100585 1 1 2 60 2R 19951054 19951072 GTACGATCCCACCATCGAG 59 19951093 19951114 CCCATACAATGTACATACCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HSPC300 FBgn0061198 FBtr0072194 2 1 1 82 2R 19916187 19916206 GCGAACAGGGAGTATATCGA 59 19915635 19916144 CGACAGGACATATCGAAAGAG 58 NA Drosophila melanogaster 61 CG2812 FBgn0034931 FBtr0072140 2 1 1 80 2R 19813670 19813688 GTCATACTGGCCACATCCT 59 19813731 19813815 AACGTATCGTTTGATCCTGC 58 NA Drosophila melanogaster 61 CG17662 FBgn0034884 FBtr0072106 1 1 1 95 2R 19493488 19493559 GTATTTCGGGTCTCTTCACG 58 19493412 19493430 AGTAGATCCAGTGGTGTGC 59 NA Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 1 1 1 60 2R 19492460 19492604 CAAGCCAATCCAACTGCTG 59 19492418 19492437 AGAACTGTTGTGATGCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Rrp4 FBgn0034879 FBtr0072111 2 1 1 94 2R 19443281 19443300 GAGAACTACGACGGAGATCG 59 19443143 19443225 AAAGATGTTCTGGACCTCGG 59 NA Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 3 2 2 93 2R 19437536 19437554 GAGCGACATCAGAAGAAGC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072014 3 1 4 110 2R 19274342 19274540 GTGCCACAGACTTTGAAGAG 59 19274612 19274631 GGCTGATGTTTCTTGTGTCG 59 NA Drosophila melanogaster 61 Gr59d FBgn0041236 FBtr0071976 3 1 1 61 2R 18991681 18991700 AGGTCTGGATCATCGATTGG 59 18991583 18991601 GATTCCGCACCAAGTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9877 FBgn0034819 FBtr0071980 3 1 1 85 2R 18973717 18973735 AGCTGCTATCGTGTTTGTC 58 18973650 18973668 AGCCACCATATCCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inaD FBgn0001263 FBtr0071909 3 1 1 82 2R 18744206 18744285 CCAACTACGATGATGCTACTG 58 18744144 18744162 CTCCTCGCTCTTGAGAGTC 59 NA Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 3 1 1 61 2R 18547464 18547542 TGACCTTGTATATCTGCTGCT 59 18547563 18547583 GCAGTAGTTGATGAAGTAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11362 FBgn0034737 FBtr0071836 2 1 1 146 2R 18449931 18450010 TTTCTTGGGAATCACACTCG 58 18450116 18450137 TAATGCGGAATACTCTGAAGAC 58 NA Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928 1 1 2 102 2R 18001831 18001849 TCTCCACATATGATCGGGA 57 18001915 18001995 TTAAGGTTGCTGTCCAGAC 57 NA Drosophila melanogaster 61 Gr58b FBgn0041238 FBtr0071732 1 1 1 106 2R 17866102 17866177 AGATGCAAAGGGAGTTGGA 59 17866014 17866032 ATAACTAAGGCAAGCGGGT 59 NA Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071746 2 1 2 115 2R 17607181 17607370 TCCCGAGCAATCAAGTGAG 59 17607084 17607105 GTAGAGATCATCGTCCAATCCA 59 NA InUTR Drosophila melanogaster 61 CG42364 FBgn0259710 FBtr0302526 2 1 1 60 2R 17553883 17553902 CCTTGTACCACAGAGTTCAG 58 17553924 17553943 ACATTTCGCTGCTTATTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30288 FBgn0050288 FBtr0113367 3 1 1 107 2R 17407683 17407703 GTCAGAGTAATGATTTCGGGA 57 17407477 17407554 GCGCACATTCATATACATTGG 58 NA Drosophila melanogaster 61 hbn FBgn0008636 FBtr0071556 1 1 1 80 2R 16845888 16846057 CGTAAAGTTCGAAGATCTCGC 59 16845828 16845847 ATACTGGGTCTTCTCGAAGG 58 NA Drosophila melanogaster 61 Cpr56F FBgn0034499 FBtr0086301 2 1 1 60 2R 16176558 16176576 CGATGGTGATCTTGCTGTG 59 16176516 16176534 AATCTGTTTGCGTCCATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0086530,FBtr0112869 3 3 3 80 2R 15315052 15315070 CCTGATCCAAATGTCACGG 58 15315113 15315190 AAGGCAAACCTTGGTTATGG 58 NA Drosophila melanogaster 61 Jheh3 FBgn0034406 FBtr0086622 2 1 1 94 2R 14749098 14749116 TACTGGCGGGACAATTACC 59 14748962 14749043 ATATTCAAGCCCTGAATTTCGG 59 NA Drosophila melanogaster 61 CG15083 FBgn0034399 FBtr0086618 1 1 1 126 2R 14722901 14722919 AAATCGATCTGACGGTGGA 58 14723008 14723794 AAGGTAAGAACGTTTGGAGC 58 NA Drosophila melanogaster 61 CG33998 FBgn0053998 FBtr0100053 3 1 1 70 2R 14626162 14626182 GTCGTGACCAGAGAATTTGTG 59 14626275 14626295 TCCGTGATCACAATTTGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30115 FBgn0050115 FBtr0300421 3 1 1 86 2R 14446960 14447039 GTCATCAAGGGATACCTGCA 59 14446893 14446913 CTCTTCAATGTTGGCGAAGAG 59 NA Drosophila melanogaster 61 GstE6 FBgn0063494 FBtr0086674 3 1 1 60 2R 14293754 14293774 GCCATTATTGCCTATTTGGTC 57 14293795 14293814 GATCTTTCGGGTATAGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstE1 FBgn0034335 FBtr0086669 3 1 1 60 2R 14285946 14285968 TCTGGAATTGTACTCTATGGGAC 59 14285988 14286006 GGGTAAGTTTGACGGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10916 FBgn0034312 FBtr0086749 2 1 1 60 2R 14062010 14062029 CCACAAGGTCATGTACATCC 58 14062051 14062070 GACTTCGTAGGTGTTTACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10912 FBgn0034296 FBtr0086807 3 1 1 99 2R 13944224 13944242 ATTCCACCTTCGAATCCTG 57 13944051 13944161 GAATATGTCGGACCCTCAG 57 NA Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 2 2 2 60 2R 13666063 13666081 TACGACAACAGATTCCGCA 59 13665973 13666040 GCTTGCATTTCCTTCCAGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG5002 FBgn0034275 FBtr0089546 3 1 1 87 2R 13638783 13638801 CCGTAATCACTGGCTTCAC 58 13638852 13638944 TTCGAAGGACTGGTCAGAC 59 NA Drosophila melanogaster 61 CG4966 FBgn0034261 FBtr0086840,FBtr0301264,FBtr0086839 2 3 3 84 2R 13577311 13577388 TGATCTTGAGATCCAACGAC 57 13577435 13577453 ATCTGATGGGTAGGTTCCT 57 NA Drosophila melanogaster 61 CG6520 FBgn0034224 FBtr0086953 3 1 1 65 2R 13363194 13363214 CTTTGAGCAGGATCTAAACGA 58 13363149 13363167 TCAACATCCTCCGCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 1 2 2 80 2R 12976444 12976523 CAGTTTCCATCTGGTATCCAC 58 12976384 12976405 CACATCGGCAATGAATTTATCC 58 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 3 2 2 92 2R 12951503 12951762 TTCTATTCGGACCACCAGG 58 12951818 12951836 CGAGTATACGGCTTTGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6472 FBgn0034166 FBtr0087046 1 1 1 141 2R 12771587 12771605 ACTTCGTGGAGAGCATAGC 59 12771710 12771785 AATTTGCCACGAATCCTGG 58 NA Drosophila melanogaster 61 Acp53Ea FBgn0015584 FBtr0087080 2 1 1 126 2R 12637670 12637755 TTACTGGCTCTCGTATTTGTG 58 12637564 12637584 GAACAGTTGGGATTGTTTCTC 57 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 2 3 5 80 2R 12247595 12247615 TCGATATGTTCACCAATTGCC 59 12247654 12247763 GATCATTGAAGTGCTTCTCGAC 59 NA Drosophila melanogaster 61 Khc FBgn0001308 FBtr0087184 2 1 1 81 2R 12157149 12157306 TGTGACAAACATGAACGAGC 59 12157087 12157105 CTGGTTCTCCAGGTTCTCC 59 NA Drosophila melanogaster 61 CG8441 FBgn0034086 FBtr0087247 3 1 1 102 2R 12073250 12073330 TCATGAAGAATCCGGATAAGC 58 12073168 12073186 CTGCTTCCCATCACATTCC 58 NA Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 2 1 1 60 2R 11879534 11879606 TTACTCCGCTTTGGTAAGTG 58 11879493 11879513 GATGGTGAATGGTCTTCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15699 FBgn0034056 FBtr0087269 2 1 1 60 2R 11875117 11875136 TTCGTGAAGATCGATTGCTC 58 11875076 11875094 ACTCGAATTTGAAGGGCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320 2 1 2 109 2R 11576211 11576280 TTAACTCGCTGTTGCAAGC 59 11576120 11576139 GCGTAGTTGGTCATTCTCCT 59 NA Drosophila melanogaster 61 Ir52a FBgn0034023 FBtr0273302 3 1 1 60 2R 11388775 11388799 CTTAGTAGGAAGAGAAATGAAGAGG 58 11388811 11388835 TTAGTATCCATGAGATATCGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11808 FBgn0034000 FBtr0087366 3 1 1 66 2R 11104372 11104453 TTCCATCCGAACTTCCTGG 59 11104483 11104501 AATTGTACAGCTTGCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34186 FBgn0085215 FBtr0112379 1 1 1 124 2R 11032888 11032910 GGCAATGACCTATATTTGTGGAG 59 11032587 11032693 AGACAACAAGACGCTTGGT 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 1 3 4 99 2R 10756534 10757570 AATATTACATCAGCCAGGTGG 57 10756455 10756473 AACAATTGGACGTAGCTGC 58 NA Drosophila melanogaster 61 CG10131 FBgn0033949 FBtr0087499 3 1 1 120 2R 10517727 10517745 GTCTGTACTCGCAGTTGGA 59 10517829 10517903 GCCACTAGCATCTGTTGTC 58 NA Drosophila melanogaster 61 CG30076 FBgn0050076 FBtr0087513 1 1 1 60 2R 10432842 10432862 TACTTTAAGAAGCGTCCACGA 59 10432802 10432823 CCATAATCTTGCCAGAGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087557 1 1 2 80 2R 10258229 10258304 CATTCAAGCAAGTTGCCGT 59 10258167 10258186 ACTTTCGCTTGGATCAATCG 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 1 3 3 80 2R 10252375 10252395 ATGCTCTGGGTGAACTAAGTC 59 10252437 10252515 CGTTCGGAACAAGTTGTCC 59 NA Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0290253 2 1 3 87 2R 10220418 10236910 ATCAGAAGATCGAATTCCAAGG 58 10236958 10236976 TGTATATGCCATGGTCGGG 59 NA Drosophila melanogaster 61 CG8494 FBgn0033916 FBtr0087535 1 1 1 105 2R 10130375 10130484 AGCTAAAGGAAACTACAATGCC 59 10130550 10130568 GTATTCGCTCGGAAATGCA 58 NA Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 1 1 1 101 2R 10090723 10090879 CCTCAGCAAGATGTTGGGA 59 10090640 10090658 TCCGTCATGTGAATCACCC 59 NA DesignNoJunction Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 2 1 1 90 2R 10049069 10049142 CTACTGTCCGTGTATGGGA 58 10049196 10049214 GATCAGGGTGCGATTAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 stj FBgn0261041 FBtr0087631 1 1 1 80 2R 9701618 9701638 GTTGACATGATTGAAGTCGAG 57 9701678 9701756 ATCTCTTATCGTCATCAGCAC 57 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672 3 1 2 212 2R 9409372 9409390 GAAGAGGACAACTCAACGC 58 9409615 9409829 GGTAGTTGCCTCTCAGTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388,FBtr0087669 1 2 2 81 2R 9399874 9399895 CTGCCTCAAGAACTATTGTGAG 59 9399937 9400022 CATGTTTCGACACCCAACG 59 NA Drosophila melanogaster 61 cid FBgn0040477 FBtr0087667 3 1 1 61 2R 9373743 9373761 CGTGCGAGATGTACTTGAC 58 9373786 9373804 ATTGCGATGCTTGGTTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10814 FBgn0033830 FBtr0087720 3 1 1 177 2R 9264311 9264329 CACAATATCTGGAGGGCAC 58 9263853 9263871 TGAATCTGCAGGAGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33137 FBgn0053137 FBtr0087733 1 1 1 95 2R 9062699 9062905 ATGACAAGCGCTTATGCTG 59 9062963 9062982 GTAGACGATGTTGGGTTCAC 58 NA InUTR Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0087816 3 1 4 103 2R 8756727 8756745 AATAGGCAGTGCATTCCCT 59 8756576 8756661 TCAAAGTCGTCCAGTTTGAC 58 NA InUTR Drosophila melanogaster 61 ox FBgn0011227 FBtr0087861 1 1 1 135 2R 8644904 8644923 CTACAACACCCTGTTCAAGC 59 8644722 8644806 GTCCTTCCAGAGTTTGCCT 59 NA Drosophila melanogaster 61 CG30055 FBgn0050055 FBtr0087827 2 1 1 140 2R 8477714 8477735 CGAAAGTTCAAAGTTCACATGC 59 8477836 8477953 CATGACAGATCTTCCTGCG 58 NA InUTR Drosophila melanogaster 61 stil FBgn0003527 FBtr0087825 2 1 1 93 2R 8458136 8458230 CATGCACATCAAGAGACGT 58 8458287 8458305 TTTCATGATCCGATCACGG 57 NA Drosophila melanogaster 61 CG33013 FBgn0053013 FBtr0290072 3 1 1 80 2R 8252145 8252166 GGAACAATATTCTTGCACTTGC 58 8252202 8252276 CATGGCTATCATCAGTATTCTCTG 59 NA Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065,FBtr0088066 3 2 2 60 2R 7676129 7676150 GTTCTACTATTTCTTCAGGCCC 58 7676090 7676113 CACTATAATACCAGTTCCGATCCA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir48b FBgn0033648 FBtr0088080 3 1 1 60 2R 7589322 7589343 CATGCTATATGTGAATCGCTGG 59 7589283 7589303 AAGGAACCTCATGTAGAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7763 FBgn0040503 FBtr0088135 1 1 1 60 2R 7302601 7302619 GAATCGCTACTGGATCGAC 57 7302642 7302661 GGTCACAGAAACGAATTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kappaTry FBgn0043471 FBtr0301671 2 1 1 60 2R 7226063 7226084 CGTCATCCATATCTAGTCTCCC 59 7226024 7226042 CGTGCATATAGCTGGACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lambdaTry FBgn0043470 FBtr0088121 1 1 1 60 2R 7224446 7224466 CATATACCGAAGCTCGATGGA 59 7224485 7224506 GATATTGGGTGATGTTCGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 3 3 3 80 2R 7174167 7174241 GCATCAATGCAGGAAATTATGG 58 7174108 7174128 GGATTCATCTGTTAAGGCAGC 59 NA Drosophila melanogaster 61 CG13218 FBgn0033587 FBtr0088195 1 1 1 63 2R 7120941 7120959 GAGGTGGATTCATTGGTGG 58 7120896 7120914 TAGCTTTCCTTGTAGCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 2 3 3 132 2R 7108117 7108443 GACACTATCAGCATCGTTGAG 59 7108535 7108555 GGTTCAGGCTCATCTTATCCT 59 NA InUTR Drosophila melanogaster 61 CG11777 FBgn0033527 FBtr0088273 2 1 1 90 2R 6356361 6356379 TGGAGATCCTACGAACACC 58 6356431 6356714 ATCAGTGTGCTTAATGGTCTC 58 NA Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088330 2 1 2 86 2R 6027683 6027702 TACTTTGCAAGCCGATTTCG 59 6027749 6027861 CGTCAGATAACACAGCAATGG 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 3 3 3 81 2R 6019888 6019908 CCAGAGCTACGAAATAAAGCT 58 6019949 6020269 GATCTTGATCACGCTCTTCAG 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0112902,FBtr0112901,FBtr0088437,FBtr0088439 1 5 5 86 2R 5885978 5885996 TCTTGAAGTCGGCCTTCAG 59 5885842 5885928 GTTCGTAGTTCTGCAAGGC 59 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088486 3 1 4 60 2R 5717357 5720994 CATTCCAGCTTAGCGAACG 59 5717315 5717333 TTGAATCTGGTCGTGATCG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG1888 FBgn0033421 FBtr0088547 2 1 1 83 2R 5433795 5434242 CTCACCTGCAAGATGAAGC 58 5433730 5433748 GAAAGTTTCGCAGCAACTC 57 NA Drosophila melanogaster 61 CG30345 FBgn0050345 FBtr0088584 1 1 1 80 2R 5036489 5036575 GCAGATTCCTAACAGATGCC 58 5036615 5036636 CGGTAGCATTGTATTTCATGAC 58 NA Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 2 2 2 81 2R 5002675 5002751 GGACGAATTACTTGTTCGAGTC 59 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 1 3 3 91 2R 4799446 4799529 AGAAGAATGCTCCTGTTATCCT 59 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 CG8584 FBgn0033322 FBtr0088724 2 1 1 60 2R 4588654 4588673 ATGTAGACGAGTTCCTGGAC 59 4588613 4588632 CTGGCCGTATAGATCACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14752 FBgn0033307 FBtr0088691 1 1 1 194 2R 4478576 4479074 TTCTTTGGCAAACACGAGC 59 4479232 4479250 GATCTCCTCGTGATGGACG 59 NA Drosophila melanogaster 61 CG14759 FBgn0033278 FBtr0088796 1 1 1 60 2R 4147670 4147689 CGTAAGAGTTCATGGACCGA 59 4147712 4147730 TGAGGAAGCTCTTGACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30373 FBgn0050373 FBtr0088806 3 1 1 291 2R 4052111 4052129 TTGCTTGAGTTTCCCATCG 58 4051777 4051795 GTACAGGAGGAAGATGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RagC FBgn0033272 FBtr0088807 2 1 1 84 2R 4049717 4049799 CATATACAGCTCCGAAGAAACC 59 4049654 4049672 CCGCAGGTAGAGTATCGTG 59 NA Drosophila melanogaster 61 CG2158 FBgn0033264 FBtr0088783 2 1 1 128 2R 4012044 4012124 AGTTTAAACAGGTTGTGGAGG 58 4012214 4012232 TTTCGGAGTCCTTGACAGG 59 NA Drosophila melanogaster 61 Vps28 FBgn0021814 FBtr0088825 2 1 1 74 2R 3967257 3967275 TACCTGGTGCAGTACAAGG 59 3967201 3967219 CTTAACGAACGTCTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 phr FBgn0003082 FBtr0088839,FBtr0088838 3 2 2 216 2R 3714183 3714201 GAGGACAACACAAAGCCTC 58 3714442 3714461 CACAGGTCGTCATAAGTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 2 2 3 153 2R 3613394 3613412 CCTGAATTCGTACAGCAGC 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG2064 FBgn0033205 FBtr0088923 3 1 1 80 2R 3554123 3554197 CGACGTACTGAAGAACTCG 58 3554241 3554259 GCTACGTTAATGGAGCCAC 58 NA Drosophila melanogaster 61 CG30499 FBgn0050499 FBtr0088954 2 1 1 96 2R 3452739 3452815 AACAAGATCAAGACGGCCT 59 3452661 3452679 TGTAGAGATTGACACCGGC 59 NA Drosophila melanogaster 61 Corin FBgn0033192 FBtr0088909 1 1 1 80 2R 3448110 3448128 GTGAGGAATCTGCATCCTG 58 3448172 3448252 GTACGTGGATTTGGGATCC 58 NA Drosophila melanogaster 61 CG33140 FBgn0053140 FBtr0089046 3 1 1 60 2R 3066973 3066991 TAGATTACGTTCCGTGCGA 58 3067013 3067033 GCGACTATTTCATAGCAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn43Ad FBgn0044011 FBtr0089053 2 1 1 98 2R 3041583 3041601 TCTCCTGGAGCTACAGGAG 59 3041446 3041464 AACGGGTGATTGATGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Ep FBgn0033137 FBtr0089062 3 1 1 87 2R 2944908 2944988 TCTATATGCTACTCGGCATAGG 58 2944842 2944860 AAATAAGTGTGCTCTGGCG 58 NA Drosophila melanogaster 61 Tsp42Ef FBgn0033127 FBtr0089023 2 1 1 130 2R 2914541 2914560 ACCTAAACGAGATCGGTCAG 59 2914650 2914732 AATAATGAACGTCACTGTGCAG 59 NA Drosophila melanogaster 61 CG30156 FBgn0050156 FBtr0086184 2 1 1 80 2R 2869299 2869319 AACTGGAAGTAGAAATCGAGG 57 2869182 2869257 GATTATCCCTCCAACTCCG 57 NA Drosophila melanogaster 61 CG9460 FBgn0033115 FBtr0086164 1 1 1 83 2R 2775493 2775578 GAGCAACCTTTATCAAGGTCTC 59 2775622 2775640 AGAAGAAGGGATGATCCGC 59 NA Drosophila melanogaster 61 CG7849 FBgn0033060 FBtr0085977 1 1 1 108 2R 1964780 1964798 TATCCGACCACCTTCTGTC 58 1964870 1964937 ATCCCAAAGAGCAGGACTC 59 NA Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 3 2 2 100 2R 1566991 1567071 CGTAAATGGTCTTCCGGTG 58 1566909 1566927 TCTTGACTCCAGTCAGCTG 59 NA Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 3 1 1 64 2R 674683 674705 CGCAAAGCTTCTATGATAGATGG 59 674579 674661 TTAAGTGGGTTTCGATCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 1 2 3 95 2L 20648001 20648197 GGTTTCCACACTTATAATGCAG 57 20648424 20648442 AGAAATTCGGGTTTCAGCA 57 NA Drosophila melanogaster 61 CG11634 FBgn0032968 FBtr0085930 3 1 1 60 2L 21916484 21916502 CACTGGATCATGTCGTCAC 58 21916525 21916544 TGATCAGGTGATCTTCCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31600 FBgn0051600 FBtr0085949 2 1 1 91 2L 21914958 21915025 TGTTCTCGGGCTTATACCG 59 21914885 21914904 TATAGCTCCTGTTCATGGCT 58 NA Drosophila melanogaster 61 His4:CG33881 FBgn0053881 FBtr0091885 1 1 1 60 2L 21504524 21504542 GAACGTAATTCGTGATGCC 57 21504482 21504500 GGCTGTAACTGTCTTCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 neb FBgn0004374 FBtr0081332 1 1 1 248 2L 20077181 20077199 AAGTAATTGCTGCTCTCGC 58 20087761 20087779 TTACCTTCACCCGGTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 1 2 2 80 2L 19419106 19419125 AAACTTCTCCTGCTGTTCCT 59 19419164 19419317 CTCTAGGTTATATCGGTTACCCA 59 NA Drosophila melanogaster 61 CG17568 FBgn0032763 FBtr0081233 1 1 1 80 2L 19181393 19181470 AGTACTTCGAAGTGCAAATGC 59 19181333 19181354 GTTCGCTAATAAGCGTATAGCA 58 NA Drosophila melanogaster 61 CG15172 FBgn0032740 FBtr0081140 1 1 1 60 2L 19023432 19023451 TCACAGACACTGAATCATCC 57 19023474 19023492 TCGGAGTCACTATCCAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17323 FBgn0032713 FBtr0081104 2 1 1 99 2L 18825159 18825249 GATGTACAAATTACTATCGGTTCCC 59 18825306 18825324 GGATGTGTTCTTCACCAGC 58 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 3 2 2 100 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699103 18699121 TGTCATGGCTTGTGTTGAC 58 NA Drosophila melanogaster 61 CG5043 FBgn0032636 FBtr0080980 2 1 1 96 2L 17434049 17434070 AGAACCCTTTACTCCAAATCAC 58 17434125 17434208 TGTCTACTGAGGCATTATCCT 58 NA Drosophila melanogaster 61 ApepP FBgn0026150 FBtr0080956 2 1 1 60 2L 16908687 16908709 AGTAGGTCACTTCCTAAATGTCC 59 16908649 16908667 GGGCATCAGTCGAATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32832 FBgn0052832 FBtr0080960 2 1 1 105 2L 16878865 16879025 TTTAAATGGTCCTTGGTGCTG 59 16878780 16878798 AAATTAAGCCCGTGACTGC 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080905,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080906,FBtr0080899,FBtr0080907,FBtr0080900 2 16 16 90 2L 16770966 16771053 TTGAGACCTATCTGCTGGAG 58 16771106 16771124 GAGCCAGACATGATCTGGT 59 NA Drosophila melanogaster 61 ChLD3 FBgn0032598 FBtr0080892 3 1 1 84 2L 16741816 16741834 CAATAGGGCACCATTTGGC 59 16741879 16741958 GTCGAGGAATTTCAGAAATGCA 59 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 3 2 2 82 2L 16505876 16505896 ACGATACGAAATCCTATCGCA 59 16505937 16506017 TAGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 CG31820 FBgn0051820 FBtr0080807 2 1 1 90 2L 16006177 16006196 CTCAAGCATTTCTCTTGCCT 58 16006055 16006073 GGGCATAGGATACCGATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10839 FBgn0028858 FBtr0080800 3 1 1 60 2L 15979945 15979965 ATATGATCAAGGACTGGACGG 59 15979987 15980005 ATCTCGCTGAGATTTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31826 FBgn0051826 FBtr0080762 2 1 1 139 2L 15772568 15772588 ACACCTTTGGACGATATTTCG 58 15772390 15772467 TAGGTCCTCGCATTTCTCC 58 NA InUTR Drosophila melanogaster 61 Su(H) FBgn0004837 FBtr0080700 3 1 1 95 2L 15042230 15042313 GAATGGCTTTGGGTACGTC 58 15042370 15042390 TGTATACGTGAAGGTCAGACC 59 NA Drosophila melanogaster 61 CG33648 FBgn0053648 FBtr0091625 1 1 1 85 2L 14524980 14525054 GACGTAAGTATAGTTGAGTTCACC 59 14525095 14525116 GATTTAATACGGCAACTCTCGT 59 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080637 3 1 3 125 2L 14391933 14392241 ATTATCCACCCGGTTACGG 59 14391826 14391844 TCATTCGGGCGTAGTTCAG 59 NA Drosophila melanogaster 61 CG33306 FBgn0053306 FBtr0080564 3 1 1 62 2L 13843630 13843648 AAGTTGCCGAACCTTTGTC 59 13843531 13843550 CCAATCCGTCCACAATTACG 59 NA DesignNoJunction Drosophila melanogaster 61 Nnp-1 FBgn0022069 FBtr0080473 3 1 1 60 2L 13364998 13365020 CAGATCTTTGAGACTTACCAGAG 58 13364960 13364978 CCTTTGGCATTGTCCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5204 FBgn0032473 FBtr0080433 2 1 1 70 2L 13162327 13162345 TATTGCGGCGTAGAAACAG 58 13162436 13162454 AAATCTTCGGGTTCCTCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16997 FBgn0032413 FBtr0302854 1 1 1 60 2L 12111327 12111348 CATCATTAATTCCAACTGGCTG 58 12111367 12111387 TACTTGATTCCTATTGGCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14933 FBgn0040968 FBtr0080274 1 1 1 60 2L 11843303 11843321 TCCTTGCGATCTGAAGACC 59 11843342 11843363 TTTGAAGGTGACACCATTTGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14939 FBgn0032378 FBtr0080259 2 1 1 102 2L 11811656 11811674 TCACGCTAGTCTACCTGGA 59 11811478 11811496 TTTGAGGCGAGGAGAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ast-CC FBgn0032337 FBtr0114455 2 1 1 119 2L 11084337 11084818 AGTATCCGATGGTGGTTCC 58 11084236 11084255 TATCTCCGAAGAATTCGCCA 59 NA Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080156 2 1 2 184 2L 11011366 11011476 CCAGAATTCTGCAACTGCC 59 11011624 11011642 CTTGCAGATCGGTCTTGAC 58 NA InUTR Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 1 1 1 79 2L 10859570 10859588 CATTTGGAGGTGGCTTCAC 59 10859631 10859708 TTCAGTGAAACCTTTGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG6443 FBgn0032290 FBtr0080110 1 1 1 115 2L 10729296 10729377 AAAGCCAGAGCAGAAAGAC 58 10729456 10729474 AATAGAGCCTACCCATGCC 59 NA Drosophila melanogaster 61 CG31871 FBgn0051871 FBtr0080104 3 1 1 80 2L 10668326 10668701 GTCAGGATTAGGCTACATGC 58 10668744 10668762 TTCTTGGAGTACCGATTGC 58 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 2 3 3 80 2L 10465371 10465951 CCAATATAGTTCACAGACACGA 58 10465312 10465332 CAACTACAATGTCCTCATCCA 57 NA Drosophila melanogaster 61 SmB FBgn0010083 FBtr0080045 1 1 1 121 2L 10426576 10426597 CACTCGATTTATTCTTCATGCC 58 10426107 10426494 GTTGTTCTTGCCGATCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 1 2 2 84 2L 10351769 10351787 GACCCACTATCCAGATGCC 59 10350766 10351722 TTGAAACCAAACCTGCACTC 59 NA Drosophila melanogaster 61 CG4972 FBgn0032217 FBtr0079988 1 1 1 80 2L 10315356 10315376 GCTTCAATATCCCTAGAAGCG 59 10315418 10315501 CAAGTCGGTTAACCGTGTG 59 NA Drosophila melanogaster 61 Cdk5alpha FBgn0027491 FBtr0080063 3 1 1 141 2L 10309484 10309503 AAGAACTCCATGTCGAACCA 59 10308941 10309380 AAGTGGAGGCCTGAATGAC 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 3 3 3 80 2L 10275742 10275761 TTCCTAGCATATCGCAACTC 57 10275614 10275699 TTGCTGATATAAGACGCCG 57 NA Drosophila melanogaster 61 CG34048 FBgn0054048 FBtr0100103 1 1 1 80 2L 10126043 10126065 CCAATCTTACAGGATACTATCGC 58 10125869 10126003 GTGACGCACGTACTTTCTG 59 NA Drosophila melanogaster 61 CG13133 FBgn0032181 FBtr0079969 3 1 1 68 2L 10091747 10091766 TACTGATGATTACGGTGCCA 58 10091698 10091716 TGGGCTCAATCTCGATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42367 FBgn0259713 FBtr0299966 1 1 1 80 2L 9930572 9930590 ACTCATCAGTCGTCTGCAC 59 9930634 9930714 GACAATGCTGGAATGCAGG 59 NA Drosophila melanogaster 61 CG4537 FBgn0032153 FBtr0113031 3 1 1 109 2L 9891061 9891138 TACCACCTTGCCGAATCTG 59 9891211 9891229 CATGATCTTCTTGCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 CG4364 FBgn0032138 FBtr0079848 2 1 1 107 2L 9710711 9710792 GTGACTACAAGATCTTTGCCA 58 9710624 9710644 TGTGATCGAGTTTGATTTCGG 59 NA Drosophila melanogaster 61 CG4382 FBgn0032132 FBtr0114535 1 1 1 80 2L 9599900 9599976 GCCTTAAAGGGAAACACTACC 59 9599840 9599861 ATATCAAGGGATTGTTCCTGTC 58 NA Drosophila melanogaster 61 aust FBgn0032104 FBtr0079819 2 1 1 136 2L 9250862 9250880 CTACAAGCAAGAGGTGGAC 57 9250678 9250762 GCTTAATAGCTGCCCTCTG 58 NA Drosophila melanogaster 61 CG31609 FBgn0051609 FBtr0299873 2 1 1 89 2L 9097665 9097686 GTATCCAGTAGTAGCAGTTGTC 58 9097794 9097812 AAATCATCACAGGGTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18661 FBgn0040964 FBtr0079763 2 1 1 60 2L 8998151 8998169 GACAGCTGTTGAAGAAGGG 58 8998192 8998211 ATACCGTCTTGTGCATATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U26 FBgn0027780 FBtr0089673 1 1 1 80 2L 8447964 8447986 GGCACATTGTTCTATAGTGAGAG 59 8447855 8447925 TCTGGTGATTAAACCCAAGC 58 NA Drosophila melanogaster 61 emb FBgn0020497 FBtr0079663 3 1 1 80 2L 8406839 8406927 TACTGCTAGATTATCAGCGCT 58 8406967 8406987 TATGCACAATGATTGCCATCG 59 NA Drosophila melanogaster 61 CG7810 FBgn0032017 FBtr0079612 3 1 1 60 2L 8310724 8310742 AACCGAAGATACCATGCCA 59 8310682 8310702 CGTGTTCGCTAAAGTATTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scgalpha FBgn0032013 FBtr0079597 1 1 1 80 2L 8304760 8304850 ATGGTTCTGAGAGCTCTTCC 59 8304892 8304911 TGGATTTGCTATCCGAACAC 58 NA Drosophila melanogaster 61 Spn2 FBgn0028987 FBtr0079624 1 1 1 84 2L 8240902 8240923 GATGTAACTTTAAGGCTTCCCA 58 8240780 8240857 CATCTTGTATGCCCATCGC 59 NA Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301129,FBtr0301128 1 2 2 73 2L 8028037 8028055 CATCAATCTGCCACAGCTC 59 8027908 8027928 CTATCCAGAAATCAGCACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11322 FBgn0031856 FBtr0290242 2 1 1 60 2L 6759132 6759150 CCGCAAGCTCTACAATCCT 59 6759090 6759112 GATATTCTCAATATCCTCCGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079316,FBtr0079315 1 2 2 60 2L 6685837 6685857 CAGGAAACGATATTCAGCAGG 59 6685797 6685816 CCTGGTATAAGTTCTTCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079208,FBtr0079207 1 2 2 113 2L 6154021 6154658 GAAATTTAATACCAGCTCGGAC 57 6153929 6153947 ATTTCCATCTGCCTTTCCC 57 NA InUTR Drosophila melanogaster 61 Gal FBgn0001089 FBtr0079230 2 1 1 80 2L 6005737 6005755 GATTGCTCAGGAGGAAGAC 57 6005542 6005694 GGAAGACCACCATTATCTCG 57 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079151 2 1 2 287 2L 5923471 5923543 AAAGTGTCAGTGAGCAGCA 59 5923202 5923220 AACTCTTTGGTGCTAGCGT 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG7236 FBgn0031730 FBtr0079133 1 1 1 80 2L 5712353 5712371 AAGAGGTTTGTGGAGTCCG 59 5712413 5712490 CTTCAGGTTCTTCAGTAGCCT 59 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 2 3 3 80 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533811 AGTCTGGGTGTTACTATGGT 57 NA Drosophila melanogaster 61 CG7371 FBgn0031710 FBtr0079129 2 1 1 80 2L 5522670 5522745 TAAAGAATCGATACACAGCGG 58 5522610 5522628 ATAGGTATTCCCGACAGGC 58 NA Drosophila melanogaster 61 CG5828 FBgn0031682 FBtr0079018 3 1 1 60 2L 5094331 5094349 AATGTGCCAGTCAACAAGG 58 5094371 5094391 CGTTTAGCTTGAGAAGCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 2 3 3 105 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034972 5035074 TCCAATAAGACCTTGACGTCC 59 NA Drosophila melanogaster 61 CG14044 FBgn0031650 FBtr0078990 1 1 1 80 2L 4942880 4942898 AGACGAATCCTGTCGTCAC 60 4942942 4943026 ATTGCTCGACCACATTTCC 59 NA Drosophila melanogaster 61 CG3251 FBgn0031622 FBtr0077422 3 1 1 81 2L 4690501 4690574 TTCCACTGAAGTTAGAAAGGC 58 4690440 4690458 CCCTAGCATATGCTTCCGA 59 NA Drosophila melanogaster 61 BG642163 FBgn0083938 FBtr0110769 2 1 1 106 2L 4641383 4641461 TATCTCCAAGAACAACTTCCC 57 4641527 4641547 ACAAAGGTATCCTGAGTTTGG 58 NA Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 2 2 2 60 2L 4434737 4434858 TATGGAATGCTGTTTACGTGTG 59 4434876 4434897 AATCCTTAAAGTGACAGTGCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 3 2 3 196 2L 4372531 4378918 GAACAGATTATCTATCCCGGTC 58 4379075 4379093 TGATCGGTCATCATGATGC 57 NA Drosophila melanogaster 61 CG33282 FBgn0053282 FBtr0113458 2 1 1 80 2L 3329336 3329430 ACTGTTTCCAGTAAAGATTCGC 59 3329471 3329489 TTCAGGGTTCCAAAGACGA 58 NA Drosophila melanogaster 61 CG15403 FBgn0031504 FBtr0077661 1 1 1 60 2L 3129070 3129089 GGCATTCAAGGAGTATGGAG 58 3129111 3129130 AGAAATGACGGAAATGACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PpD6 FBgn0005779 FBtr0077660 3 1 1 60 2L 3110639 3110660 TGGACAAGGACCTAGTTATCTC 58 3110680 3110699 ACCACGATTCTTCGAATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3605 FBgn0031493 FBtr0077669 2 1 1 80 2L 3027276 3027351 ATTGGACCTTGATAATGGCG 58 3027215 3027235 GATTCTTCTGACTCCGATTCC 58 NA Drosophila melanogaster 61 okr FBgn0002989 FBtr0077673 2 1 1 101 2L 2991054 2991133 CAAACCAAAGGATCTCAATCCA 59 2990974 2990992 ATGAGAACCACCTTGTCGT 59 NA Drosophila melanogaster 61 CG8814 FBgn0031478 FBtr0077629 2 1 1 122 2L 2875256 2875397 AATAATTAGGTATGGCGGCGA 59 2875481 2875499 ACAGCCCGTAGAACTTGAG 59 NA InUTR Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0273293 2 1 3 235 2L 2856278 2856296 ATGTTGATCTGTACGTGCC 58 2856565 2856584 TCTAGCACAAACTCACTTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp309a1 FBgn0031432 FBtr0077749 2 1 1 80 2L 2564214 2564234 GAAGCTGGTCGAGTATATCGA 59 2564103 2564177 GTAAATCGATAGGCAAGATCTCTG 59 NA Drosophila melanogaster 61 CG34448 FBgn0085477 FBtr0112752 2 1 1 80 2L 2416925 2417004 CTTTGTCTCAGAAGATGCGT 58 2416864 2416882 TCAACCAGAGGTCCTTTGG 59 NA Drosophila melanogaster 61 CG9870 FBgn0031422 FBtr0077768 2 1 1 101 2L 2383957 2383976 TCTTCATACTGGGATTCACG 57 2384037 2384111 GAAGGAATAGCAAACCTATTGC 57 NA Drosophila melanogaster 61 CG31663 FBgn0051663 FBtr0077893 3 1 1 96 2L 1858989 1862727 TGTTAATGGACCAAGAGGGTC 59 1858913 1858931 GATTCCGCCTTATCCTCCC 59 NA Drosophila melanogaster 61 CG31663 FBgn0051663 FBtr0077893 2 1 1 96 2L 1867355 1869084 GGGATTGAATTTGACAAACAGC 59 1867280 1867300 CATTTGCAGCATGAAGTAGGT 59 NA Drosophila melanogaster 61 CG17712 FBgn0027597 FBtr0077903 2 1 1 60 2L 1751899 1751917 AAAGAGGCGAAAGAGACTG 57 1751857 1751876 CGTCGATTACGTTCGTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 3 2 2 60 2L 1354590 1354609 GGATTCATTCGACTGATGCC 59 1354549 1354567 TGTTGAACGCTTTGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 2 1 1 61 2L 1352719 1352740 GGTATTAGCTATTGCATCTTCG 57 1352623 1352698 TTATAGACATGACGCGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12715 FBgn0030443 FBtr0073750 2 1 1 70 X 12949184 12949203 TATATCACAGCCAGCATCCC 59 12948758 12948776 TATCGATTCCTGGATGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 1 2 2 109 X 1948465 1948546 AACCCATGGAAAGAACCCT 58 1948617 1948637 AGGATGCATTTGAGGTATTGC 59 NA Drosophila melanogaster 61 RhoGAP92B FBgn0038747 FBtr0083821 1 1 1 83 3R 15731075 15731364 CTGTCAAGATCGAGCAAGTC 58 15731410 15731428 GATGGTGTCCCGGTATCTG 59 NA Drosophila melanogaster 61 CR33283 FBgn0053283 FBtr0302444 2 1 1 80 3L 20972006 20972026 TTCGAAGAGAACAAGCAACTC 59 20972068 20972149 AAGATCTCCGGCACATCTG 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076525,FBtr0076528 1 4 5 89 3L 9083435 9083453 CATACCACCAGCCTTTGTG 58 9083506 9083581 TATTGAACGGGAGCCTGAC 59 NA Drosophila melanogaster 61 CG15127 FBgn0040730 FBtr0086482 1 1 1 67 2R 15568671 15568689 AGAGGTGATAATGCCCTCG 59 15568622 15568640 GATTGTAGCTGGGTTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 3 5 5 80 2R 10790225 10790304 CTGTCCGACAGTAATGGCA 59 10790163 10790183 ATCCAGCAGTATGGATACCAC 59 NA Drosophila melanogaster 61 CG13330 FBgn0033848 FBtr0087671 2 1 1 199 2R 9402848 9402933 GTATATCGAATCCTTCGCGTC 58 9403094 9403112 GCTGAATCTGGGATTGTGG 58 NA Drosophila melanogaster 61 CG34132 FBgn0083968 FBtr0110879 1 1 1 145 2L 7885669 7885689 CAAAGGTGAACTTATGGACCA 58 7885795 7885886 AAATGCATTTCTGTTCGGAC 57 NA Drosophila melanogaster 61 Taf12L FBgn0031623 FBtr0077420 1 1 1 86 2L 4701202 4701284 GCTACGATATTATCTCCAAGACC 58 4701138 4701156 TATCGCAACCTTGATCGTC 57 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0301087,FBtr0077951 2 2 2 60 2L 1038042 1038061 CTCTTGTACATCGATCAGCC 58 1038083 1038102 AGAAGATGTACGTCGACGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TSG101 FBgn0036666 FBtr0075329 3 1 1 81 3L 16837166 16837184 TTGAAGATCTTGAGAGCGC 58 16837226 16837315 TTGAGTAACTGTCGGTAAAGTG 58 NA Drosophila melanogaster 61 CG31697 FBgn0051697 FBtr0081250 2 1 1 60 2L 19535933 19535951 TCTTTCCTCACGAGAACGA 58 19535975 19535993 GAGCGTTTGAGTTTGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083665 3 1 2 265 3R 14495410 14496834 ACTAACGACTATCCACGGC 59 14497061 14497081 GTGCTTCATTATGGTATCGGT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089618,FBtr0089615,FBtr0089621 2 7 7 99 2R 10490079 10490097 TCGCTACGACCGTAATCTC 59 10489937 10490016 TGAAGTTCGACGTAGTTGC 58 NA Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081164 1 2 3 139 2L 19123545 19123766 CCTTTAACAAGATAATGGCTGC 58 19123427 19123445 GAAGCGATCGAAGATGACC 58 NA InUTR Drosophila melanogaster 61 CG32726 FBgn0052726 FBtr0071059 3 1 1 76 X 7319638 7319722 GCTGTCTGCTGCAATTCTC 59 7319580 7319598 GAAGTTGCGATGATGACCG 59 NA DesignRelaxed Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 3 2 2 217 3R 17863397 17863415 TTGTGCAGTACGATCCTCC 59 17863596 17863693 GATCAGTTTCTCCAGCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Arf72A FBgn0000115 FBtr0075517 2 1 1 136 3L 15976569 15976587 CCTCTACAGACTGCAGGTG 59 15976681 15976973 GCCAATAAGGTCTAATACTTGTCTG 59 NA Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 1 1 1 71 2R 12760755 12760773 ATCACTTGGGATCAGTGGG 59 12760808 12760895 AGAACTATCCGTCAATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940,FBtr0300779,FBtr0300780,FBtr0088939 2 4 5 167 2R 3565903 3566088 TCTAAACAGAATGGAACTCCC 57 3565756 3565776 TGGCTCTGGTTTAATACTGTC 57 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 3 4 4 107 3R 13533849 13533868 TCTCAATATTCGCCGTACCC 59 13533697 13533779 ATTCGGTTCGGGATACTGG 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 3 3 3 81 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251532 10251550 GTGAGGTTGTACTTGAGGC 58 NA Drosophila melanogaster 61 usnp FBgn0034913 FBtr0072236 2 1 1 77 2R 19731945 19731963 CTATGCTGAGAAGCGAAGG 58 19731817 19731904 GTTTCGTAGAGCAGACCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG11851 FBgn0039293 FBtr0084808 1 1 1 134 3R 21048523 21048599 AATATTATTTGGCTCCTGGCAC 59 21048694 21048712 GAGAAGCCACAGGTACAGG 59 NA Drosophila melanogaster 61 CG8539 FBgn0035791 FBtr0076831 3 1 1 81 3L 7491071 7491091 AAACGGGCTGTAATGTATCTC 58 7490927 7491031 ACACTGGATCTGTATCGTAGAC 59 NA Drosophila melanogaster 61 Cyp6v1 FBgn0031126 FBtr0077276 1 1 1 93 X 20531663 20532015 ATCCTAAGTACTGGCCGGA 59 20532072 20532090 AAGGGCATGTAGGACATGG 59 NA Drosophila melanogaster 61 CG34401 FBgn0085430 FBtr0112653 2 1 1 81 X 18772011 18772091 GCAGTCTATCAAGCGATCG 58 18772136 18772154 TCATTTGGAGTTGCTCTGC 58 NA Drosophila melanogaster 61 CG7322 FBgn0030968 FBtr0074654 1 1 1 113 X 18750458 18751111 ATTTCGACACCCACTTCGA 59 18750363 18750381 ATGACGCTATCGAGGACAC 59 NA Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722 3 1 2 195 X 18739841 18743916 CTTCCACATCGAGCATTGC 59 18744073 18744093 TTCTCCACGCTAATCTTCTCC 59 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069,FBtr0074277,FBtr0074276 3 3 3 81 X 16328105 16328126 GTTTGACTCGAACGATTATTCC 57 16328164 16328308 CTTATAGCGATGAACCCATAGAC 58 NA Drosophila melanogaster 61 CG9919 FBgn0030742 FBtr0074236 3 1 1 81 X 16223400 16223562 CAGTCGTTTGTCAAGTCCT 57 16223337 16223355 GGTAGGAGTCCATCAATGG 57 NA Drosophila melanogaster 61 CG11581 FBgn0030540 FBtr0073892 1 1 1 60 X 14071567 14071585 GTTCCCATCACAAGGAGGT 59 14071609 14071627 TCCTAGGAAACCATTGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073661,FBtr0301830,FBtr0301831,FBtr0073659,FBtr0073660 2 5 5 73 X 12482043 12482064 TGAAAGGTCTCAAATACGACGA 59 12481922 12482009 GCGTCCAATGATCTCACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG34028 FBgn0054028 FBtr0100083 2 1 1 181 X 9405631 9405719 TCGAAGTAAACAAACGTGGA 57 9405860 9405881 GATAGATATTAACCTCGCCCTC 57 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 3 5 5 80 X 8408693 8409228 CTGCATAAGTGGTCTGGGT 59 8409270 8409290 ATGATCGGTTGAAACACTACG 58 NA Drosophila melanogaster 61 Es2 FBgn0023506 FBtr0071198 3 1 1 95 X 8355869 8355888 ACTTTGTACAAATGGCCGAG 58 8355946 8356106 GGGACATGGCATTATTCCG 58 NA Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 1 2 2 239 X 8143399 8143417 ATCTACGTGAACACGGAGG 59 8143119 8143197 GGATTTGCTAATAGTGCCCG 59 NA DesignRelaxed Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006,FBtr0301860,FBtr0071005 1 3 3 60 X 6893966 6893984 GTGTTCCTGTGGTTCTGGT 59 6894005 6894026 TGTAGATAAGCGATATTCCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070903 2 1 2 123 X 6233624 6236116 AAATTCGACTAAAGCGGAAGAG 59 6236199 6236218 GAATACTGTTCCTGGCACTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6041 FBgn0029826 FBtr0070861 3 1 1 93 X 5843234 5843254 AGAAGAGCTATGGATCTGGTC 58 5843309 5843392 TTGTCGGTGATGTAACAGC 58 NA Drosophila melanogaster 61 SPR FBgn0029768 FBtr0070778 1 1 1 80 X 5373121 5373139 GAACTCCCTGATTGTGCTC 58 5373180 5374878 CATATAGCCATTCCCATTAGCA 58 NA Drosophila melanogaster 61 Ilp6 FBgn0044047 FBtr0070406 1 1 1 99 X 2225868 2225966 TGTATTTCCCAACAGTTTCGG 58 2225789 2225807 CAAGAGCTCCCTGTAGGTG 59 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 1 3 3 103 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 A3-3 FBgn0028550 FBtr0070244 2 1 1 148 X 1146119 1154001 GCATTTATTGATTCGATGCCG 58 1145991 1146009 GGCAGAGGAGTAAGATCGA 58 NA InUTR Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 2 3 3 66 X 520388 520548 AAACAACACAAACAGCTTCC 57 520577 520595 CTTCAGCAGCTTCTTGGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 elav FBgn0260400 FBtr0114366 2 1 3 92 X 417084 417102 GTTGAGTTGACTCCAACCG 58 413267 417029 TAAAGTCCAATTTCGCTCGG 58 NA InUTR Drosophila melanogaster 61 CR40679 FBgn0085766 FBtr0114216 2 1 1 60 U 9999668 9999686 ACTGCATCTCACATTTGCC 58 9999708 9999728 CCGTAAAGAAGACAGTTCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42434 FBgn0259865 FBtr0300162 2 1 1 63 U 8685376 8685394 CTCCGAATACAGTCCTGGT 58 8685331 8685349 TAAGTGGCATAGGGACTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42406 FBgn0259837 FBtr0300134 1 1 1 81 U 5414583 5414601 TGGGCCTGTAGTACTTCAG 58 5414646 5414664 ATCGTCGTAGAACAAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42644 FBgn0261404 FBtr0302341 3 1 1 76 U 16055 16075 AGTTAAGTAACACAACGGTCC 58 16111 16131 CCGATAATGACCCAAGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300885,FBtr0300886,FBtr0300882,FBtr0300884 2 5 5 80 4 881004 881080 CCGCCAAAGTTGATGTACC 59 880942 880963 TTCGGACATAGTCCTTTACCTC 59 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972,FBtr0089971 1 2 2 80 4 653325 653959 AGTTGACTAATTCTGAGGTGTG 58 654000 654018 CCACCAAAGTACCAAGTCC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377b FBgn0083050 FBtr0113597 3 1 1 64 3R 26033319 26033338 TTTGCTGGAAGTTACATCCA 57 26033274 26033295 GTGATAGCCGCATTAATTTACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dr FBgn0000492 FBtr0085441 1 1 1 298 3R 25383377 25383396 GCAATCCACGATACTTTCCC 59 25389964 25389982 ACTTCTTCTCCAGCGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31050 FBgn0051050 FBtr0085317 3 1 1 60 3R 24476144 24476162 CGTCGAGTACTGGAAACCT 59 24476044 24476120 TTGACTTGCGAAGACATGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 3 2 2 80 3R 22769910 22769997 AGATTGTCGAATACTATGGCG 58 22770037 22770057 AGTCCTTGTTCATGTAGATGG 57 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 2 5 5 83 3R 21874083 21874101 AAATGGTTCGTTTCCACCG 59 21874146 21874228 TTCCTTCGACTGGAATATGCT 59 NA Drosophila melanogaster 61 CG42488 FBgn0259991 FBtr0300440 1 1 1 93 3R 21308948 21308966 TACATGGACTGCATGACCC 59 21309076 21309096 ATTGTACTATCTTCTGGGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 fd96Cb FBgn0004898 FBtr0084771 2 1 1 60 3R 20920982 20921001 CATTCTACCGGAAGAACACG 58 20921024 20921042 TTGAAGCTGAGATTGTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 1 2 2 91 3R 20570005 20570515 TGTTGAAAGCGGAAACGTC 59 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 2 2 3 102 3R 20476304 20476382 CCAGGCTACCATATCCCAG 59 20476446 20476466 CTCCTTGTCCTTGCTAAACTG 59 NA Drosophila melanogaster 61 CG13613 FBgn0039193 FBtr0113278 1 1 1 110 3R 20191768 20191922 TTCCTGCTCACACCATCTC 59 20191996 20192014 TAGATGACACTGACCACCG 58 NA Drosophila melanogaster 61 CG31148 FBgn0051148 FBtr0084441 1 1 1 95 3R 19526429 19526499 TATCAGCAATTGGTGGCCA 59 19526558 19526576 AATCACAATAGTCCGCCGT 59 NA Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 2 1 1 176 3R 19238027 19238045 CATTACGTCGCAATCCCAG 59 19237738 19237887 AACTCGTAGCCCTGTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 1 2 2 87 3R 17911578 17911964 TGCTACGACTGTAATCCACC 59 17911510 17911528 CGTTGTATCCACCTCCTCC 59 NA Drosophila melanogaster 61 dmrt93B FBgn0038851 FBtr0084007 3 1 1 81 3R 16901985 16902003 CATGTTGACCACTATGCCA 57 16902047 16902331 TTTGCTCTGGTACTGATCTG 57 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808,FBtr0301700 1 3 3 89 3R 15873697 15873781 ATCTTCTCGGAAATGGCCC 59 15873834 15873852 CAGATGGAAAGCCAAGCTG 59 NA Nonspecific Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 2 2 2 80 3R 13555396 13555892 ACACCGTGGACATTATACGA 59 13555932 13555953 GAATATTATGAGGTGGCAGGTG 59 NA Drosophila melanogaster 61 CG14322 FBgn0038532 FBtr0083476 2 1 1 80 3R 13494652 13494670 ACTCAAACTGGTCGTTTCG 58 13494711 13494792 CGAAGATGTGACGATCTTATCG 59 NA Drosophila melanogaster 61 CG14324 FBgn0038527 FBtr0083500 2 1 1 134 3R 13444491 13444510 TCCAATAGAGAACATGAGGC 57 13444321 13444341 ACAAAGTTGTTGTAGACAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14871 FBgn0038343 FBtr0300174 1 1 1 155 3R 11311034 11311052 AAGACAACGATGCATTGGC 59 11310781 11310853 GTTAAAGCAGCATGTGCGA 59 NA Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 3 2 2 111 3R 10442724 10442910 CAAATTGATCCTGCAATACGAG 58 10443039 10443057 GTAGTTCTCATCGCTGTCG 58 NA Drosophila melanogaster 61 l(3)87Df FBgn0002354 FBtr0082703 3 1 1 81 3R 8856984 8857067 ACCTGCAGGTATCAATGGT 58 8857112 8857130 CCTCATAAAGGGCTTGTCG 58 NA Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 2 2 2 110 3R 7574588 7574606 TAGCTTGGAGAACGACCAG 59 7574441 7574514 ATCGCATACTGGGAATGGT 58 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082457 1 1 6 62 3R 7417024 7417235 CTAAAGATCCGAGAGGGCA 58 7416980 7416998 ATACTCGTTGGCTACGACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6744 FBgn0037901 FBtr0082402 2 1 1 107 3R 7259970 7259988 GATCTAAGGGTTCGCAGCA 59 7259674 7259899 GGATTGGACTCGTTTGAGC 58 NA Drosophila melanogaster 61 CG9467 FBgn0037758 FBtr0082156 3 1 1 87 3R 5626401 5626419 CTGGTCAACCTCAATGTGG 58 5626254 5626272 GAAGAGCCGTGAAGAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 3 4 4 81 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592835 5592908 GATCATGTTGTGCAGATGCT 59 NA Drosophila melanogaster 61 CG11760 FBgn0037615 FBtr0081907 1 1 1 72 3R 4545265 4545284 ACGATCCGATTGATAATGGG 57 4545534 4545552 TGAAGACCGACAGTATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2046 FBgn0037378 FBtr0078668 3 1 1 60 3R 1619376 1619394 TCCCAACTTTATCGCTGGA 58 1619270 1619288 CAATTCCATCTGATCCCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14650 FBgn0037252 FBtr0078926 1 1 1 86 3R 266038 266127 CCAAAGATGGTGACATTTGGG 59 266175 266193 TGTCATAGACCTTGCCGTC 59 NA Drosophila melanogaster 61 snoRNA:Or-CD11 FBgn0086082 FBtr0114358 2 1 1 60 3L 20446838 20446856 TGTGAAGAGCATTCCACGT 59 20446879 20446898 TACGGAATAGTCAAGCACAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snmRNA:641 FBgn0065088 FBtr0091663 2 1 1 61 3L 17661783 17661801 ATATAGAATCGGCCGACGC 59 17661740 17661758 ATTGGGTGTCCAATTGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0089836,FBtr0299877 3 2 2 66 3L 22858909 22858982 CTCACAGAACTATGAGGTCCC 59 22859010 22859028 TTTCTCGTTGAAACGCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 Sfp79B FBgn0259973 FBtr0300318 3 1 1 90 3L 22073427 22073446 TTCTCGTTCAGAATGAAGCT 57 22073496 22073517 CATTCGTGTTCGTATTCTTCTG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33214 FBgn0053214 FBtr0078388 2 1 1 85 3L 21493714 21493733 GATCCCATTCTTGAAACGGC 59 21491583 21493669 CAATTAAGTTTGCGTCCATTGC 59 NA Drosophila melanogaster 61 knrl FBgn0001323 FBtr0078212 1 1 1 113 3L 20595358 20610495 CATATGCGATGAATCAGACGT 58 20593053 20593071 GATTGTTGTACGATCGGCC 59 NA Drosophila melanogaster 61 CG17122 FBgn0036962 FBtr0074849 3 1 1 60 3L 20267678 20267698 GATCGATCTACTGGTCATGTC 57 20267638 20267658 GGACTTCTGGTTGGTATATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0302208 3 1 2 188 3L 17475388 17479297 GTGCAAAGCAAAGTATCATTGG 59 17475140 17475158 ACATGTGGACATTCGTCTG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG13027 FBgn0036681 FBtr0113177 1 1 1 81 3L 16937693 16937773 GTTGGTTAATGAGGCCTATGAG 59 16937815 16937833 GATGGAGTCATCGTTCGGA 59 NA Drosophila melanogaster 61 CG34452 FBgn0085481 FBtr0299517 3 1 1 80 3L 15680214 15680234 AAGACGTATAGTCCCAAAGAG 57 15680037 15680174 ACCTTCTAGCATAAAGACCAG 57 NA Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 1 3 3 80 3L 14981281 14981299 AATCCCTCATCGTTTGGGT 59 14981342 14982960 GTATCATCGTGCCCAATTCG 59 NA Drosophila melanogaster 61 CG14109 FBgn0036364 FBtr0075850 2 1 1 97 3L 13434303 13434321 TCTTCTCCTCAGGAACCCA 59 13434729 13434747 TCTGTTGGAAGCAGCTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11253 FBgn0036338 FBtr0075894 2 1 1 99 3L 13018102 13018121 AGATACGGACCATACTTGCG 59 13017965 13018040 CTTGAGCTGACAATCACGG 58 NA Drosophila melanogaster 61 CG11529 FBgn0036264 FBtr0076005 3 1 1 60 3L 12191202 12191221 AAACGTTGGATCCTAACAGC 58 12191243 12191262 GATACACATCGTAGTGGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300726,FBtr0300097 3 3 3 92 3L 11683406 11684010 GGCTGAATGATATGATGAGCG 59 11683334 11683352 CTTTGGTGCGCTGATAGAC 59 NA Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 2 2 2 81 3L 11556187 11556412 CGTCCAAGATAAAGATTAAGGACG 59 11556451 11556470 GCCAAATAGGGAGATCCTCC 59 NA Drosophila melanogaster 61 CG34456 FBgn0085485 FBtr0112762 2 1 1 60 3L 9355703 9355721 AAGCTTCTACCACCGAGAC 59 9355744 9355763 ATATACAGCCGTTTCCTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 2 1 1 141 3L 9129757 9129869 GAAAGGAACTGCTCCAGGA 59 9129634 9129655 TGGGCATTCGTATAATACTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273349 2 1 2 142 3L 8638977 8639223 ATATGAAGATTGCAGGAGCAG 58 8638855 8638873 TACTTGGTTTCCTTGGCAC 58 NA Drosophila melanogaster 61 CG42591 FBgn0260968 FBtr0301743 2 1 1 60 3L 8062718 8062737 GCTTCACGTACTATCAAGCC 58 8062677 8062696 ATCATGGGTGAGAATGTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 2 5 5 131 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365692 TTTACGACAGGTAGCTAGGC 59 NA Drosophila melanogaster 61 CG10147 FBgn0035702 FBtr0076987 1 1 1 90 3L 6480890 6480968 GAAAGCTTTGGAAGAGCCG 59 6480818 6480836 CTTGTGCAGAATCAAGCGT 59 NA Drosophila melanogaster 61 Mdr65 FBgn0004513 FBtr0077011 1 1 1 80 3L 6237406 6237426 GCTGGAAACTTACCTTAGCTG 59 6237286 6237365 TGCCTTGAAACTTAGCTACG 58 NA Drosophila melanogaster 61 CG6602 FBgn0035673 FBtr0077047 1 1 1 60 3L 6065834 6065852 TTTGGCCCTAGAAACACCT 58 6065873 6065894 CAAACTAGCCGTTAAATTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 1 1 1 60 3L 5898733 5898832 TTGGTGCTCGAGTATGTGG 59 5898691 5898709 AGGCCAGTGATAGATTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1295 FBgn0035509 FBtr0073222 1 1 1 108 3L 4204700 4204718 CAATCGAGTGCTTCCTGTG 58 4204790 4205234 AGGCTTCACTCTGTTGGAG 59 NA Drosophila melanogaster 61 Sc2 FBgn0035471 FBtr0073159 2 1 1 207 3L 3904203 3904221 CCTATGTGTCCTACCACGT 59 3904612 3904692 GAAACCAAGTCGAACAGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG2083 FBgn0035376 FBtr0289987 3 1 1 87 3L 2792160 2792241 GGGTCACAGATGCATAGCT 59 2792091 2792109 CTTGTAAGCGTTATCCGCC 59 NA Drosophila melanogaster 61 JTBR FBgn0025820 FBtr0072788 2 1 1 60 3L 1802437 1802456 ATTCACACGCACTACAAGGA 59 1802396 1802414 AGCTCCTGGTTACGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oseg4 FBgn0035264 FBtr0072797 1 1 1 80 3L 1733907 1733925 TAATCCTGCGGACGATAGG 58 1733794 1733866 ATATCCGTGTACTTGGAATCCA 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123 1 1 5 162 3L 1664020 1664548 ATTCTCGAGAAGCAGGGAC 59 1662338 1662356 CTGTGGTTCTTACTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 2 2 2 80 3L 709129 709150 GTGAATTTACCGATGAAGAGGA 58 709014 709091 ATTCAACAGTCTCCTTGATCTC 58 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 3 4 4 178 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979237 20981813 AGACCAAACATATGTGGCG 58 NA Drosophila melanogaster 61 CG30279 FBgn0050279 FBtr0071768 3 1 1 68 2R 18066724 18066742 GGAGCATAATGACTCGGCT 59 18066773 18066792 TTGATAGTCTGAGGCACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11269 FBgn0034700 FBtr0071765 3 1 1 89 2R 18026471 18026490 CTGTTCTGCCTGTTCATGAG 59 18026542 18026560 CTCCAGGAGCATCAGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acox57D-d FBgn0034629 FBtr0071607 2 1 1 84 2R 17278536 17278608 CCATTGAGCCCAATCAACC 59 17278656 17278674 ATTCCCGTAGCGATCTCAG 59 NA Drosophila melanogaster 61 CG30390 FBgn0050390 FBtr0071617 1 1 1 94 2R 17180762 17180835 ACAGATTCAGGATCGCCTG 59 17180686 17180704 GCACCAGACTAGCAATGGA 59 NA Drosophila melanogaster 61 Cht9 FBgn0034582 FBtr0071542 3 1 1 131 2R 16956136 16956216 GAGATTAAGGAGGCGTTCG 58 16956023 16956043 GGTCATCACGTTGATAAAGTC 57 NA Drosophila melanogaster 61 CG7137 FBgn0034422 FBtr0086505 2 1 1 60 2R 15115601 15115619 CCCAACAAGGTGTACTCCA 59 15115643 15115661 TGTTGCAGGCAATGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415,FBtr0300482 3 3 3 84 2R 14914734 14914753 TATTTGGTTGCATCTCTGGC 58 14914213 14914690 CATTACTTATCTCGTAGACGGC 58 NA Drosophila melanogaster 61 CG5036 FBgn0028743 FBtr0301142 2 1 1 88 2R 13685110 13685201 CTCATATCCGAGATTCCTAAACTC 58 13685248 13685266 GACTATCCGCTTTGGAACC 58 NA Drosophila melanogaster 61 CG34192 FBgn0085221 FBtr0112385 2 1 1 106 2R 13343648 13343666 ATGTTTCCGGATCTTCCAC 57 13343501 13343521 TTGAGGATCACTACATCTCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18469 FBgn0034206 FBtr0086996 3 1 1 62 2R 13133503 13133521 ATGAATCTGGCTCTGAGGC 59 13133459 13133477 TAGACTCGTCAGAATCGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9642 FBgn0034183 FBtr0086973 2 1 1 132 2R 12934482 12934500 CCTCTGTAATGTTCGGGCT 59 12934596 12934671 TAACAGACGGCACTTTCGA 59 NA Drosophila melanogaster 61 CG15614 FBgn0034168 FBtr0087050 2 1 1 98 2R 12833851 12833869 TAGCCTTCCGGAAATGGAC 59 12833930 12834037 TCATTTGGTGCTGATATCGC 58 NA Drosophila melanogaster 61 CG34189 FBgn0085218 FBtr0112382 3 1 1 60 2R 12642095 12642116 TCATATCCTGAACCATGATGTG 58 12642133 12642155 CGGATTCCATATGTACTTCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15704 FBgn0034103 FBtr0087136 1 1 1 60 2R 12167662 12167680 AGGGAATCACTGGTCTAGC 58 12167704 12167722 CCACCACTCCCAAGTACAG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG7798 FBgn0034092 FBtr0087192 1 1 1 60 2R 12109859 12109877 CCATCCAACGATCTGTGTC 58 12109817 12109836 AATACCGGATATCGTCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 2 1 1 168 2R 10840073 10840609 CAGCTGGATAGTCCACAGG 59 10839923 10839941 GATGACTGTGACTGTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 SMC2 FBgn0027783 FBtr0087461 3 1 1 83 2R 10739569 10739589 GTAAACAATCCCAACTTCCTG 57 10739444 10739525 TACCATTGACAGAACCTCCT 58 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 1 2 2 96 2R 10720449 10720684 CATCGGCTAATGCTCTTCTG 58 10720743 10720761 TGCTGATCACATCCTCCTC 58 NA Drosophila melanogaster 61 CG33007 FBgn0053007 FBtr0087778 1 1 1 60 2R 9034655 9034673 GCAGTTCCAATACGACGAG 58 9034613 9034631 GTAGTTATTGCCCGGACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8964 FBgn0033674 FBtr0088027 1 1 1 129 2R 7911659 7911765 ATGGATGAGGGAAACCCAG 59 7911548 7911566 TTGACCCTGGCTATTGGAG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 Prx2540-1 FBgn0033520 FBtr0088261 1 1 1 103 2R 6312548 6312631 CAACGTTGACGAGATTCTGAG 59 6312759 6312777 TCATGACCTTAGTGCCAGG 59 NA Nonspecific Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088523,FBtr0088521,FBtr0088522 2 3 3 80 2R 5468499 5468578 TCTACTACGAGGGTTCGGT 59 5468619 5468640 GATGATCTCCGAAATAGAGCAC 58 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 2 2 2 80 2R 5051522 5051599 TCGATCTTACAGGATGATTGC 58 5051462 5051482 TATGCATAACCAGAACCAAGG 58 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 1 2 3 147 2R 3472856 3474448 AGACCGAAATCGCAAACTG 58 3472727 3472745 CCGAACGCTTGATTTCTCG 59 NA InUTR Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 3 2 2 113 2R 2717456 2717476 TCTTGGGATTATAAGGAGCGA 58 2717551 2720150 TACTCAAAGGGCAAAGCCT 59 NA Drosophila melanogaster 61 SCAP FBgn0033052 FBtr0086027 3 1 1 80 2R 1914765 1914839 ACCCTCAAGGTGTATTGCC 59 1914703 1914722 AAAGAGACAGGTTACAGGCC 59 NA Drosophila melanogaster 61 CG14470 FBgn0033046 FBtr0086049 3 1 1 60 2R 1815082 1815102 CGAAACAAAGGATGAGTTGGA 58 1815124 1815142 GCCTTGGGTTATTTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 1 3 4 97 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 His2A:CG33847 FBgn0053847 FBtr0091851 1 1 1 60 2L 21508844 21508866 CTAGAATTATTCCGCGTCATCTG 59 21508885 21508904 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33894 FBgn0053894 FBtr0091898 1 1 1 60 2L 21472898 21472917 AGAAGAACATCACCAAGACC 57 21472857 21472875 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39b FBgn0041245 FBtr0081522 3 1 1 136 2L 21368923 21368941 CAGCAGGTTCTGGTAGAGG 59 21368174 21368826 CTTCCAATCAAGACACTCTGTC 59 NA Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081369 3 1 2 123 2L 20399111 20399129 ACTTGGACTCAACTGCCTC 59 20387507 20387527 CCTTCTGTACTAAAGCTGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10659 FBgn0032839 FBtr0081350 3 1 1 60 2L 20025643 20025661 AGCGAGAACGTTCAAAGTC 58 20025601 20025622 CAATCATCGACAGGTGATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sgt FBgn0032640 FBtr0080982 3 1 1 60 2L 17473976 17473996 ACAAGTACAATGAAGCACTGC 59 17474018 17474036 GGATTCTTGGGATCGAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 2 2 2 80 2L 17191093 17193539 ACATGATTGTTGCGTATCTTCC 59 17191034 17191055 CATAGTCTCCGATTTGGTAACG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 2 3 9 176 2L 15261625 15261726 GTGGAAATTGAATGCGATACGA 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 1 3 9 174 2L 15261626 15261725 TGGAAATTGAATGCGATACG 57 15261471 15261491 GTCCTAAACGTTGTAGTTGTG 57 NA Drosophila melanogaster 61 CG4701 FBgn0028868 FBtr0080672 2 1 1 60 2L 14766643 14766661 ACCGCCATGATTAAGACTC 57 14766682 14766703 TGTTGGTATTGCTCATTAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 2 2 2 80 2L 13971670 13971748 CGATTGCTATCAGAAGTGCA 58 13971789 13971809 TCATGGTAGGTATATCCCGGA 59 NA Drosophila melanogaster 61 CG31704 FBgn0051704 FBtr0080273 2 1 1 60 2L 11840795 11840816 GTGTCCTCGAAACTATGATCCT 59 11840834 11840855 ACACTGGTTACTATAGGTCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Porin2 FBgn0069354 FBtr0080184 2 1 1 91 2L 10846634 10846653 CTTCGGTGAGATTATGCACC 58 10846496 10846580 CATCCGCCTCATTTGATCC 58 NA Drosophila melanogaster 61 CG6508 FBgn0032303 FBtr0080139 3 1 1 60 2L 10819621 10819639 ATCGATGAACCAGGTTCAG 57 10819662 10819681 ATGCCATTCCAATTATGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17105 FBgn0032280 FBtr0080106 3 1 1 72 2L 10681056 10681074 TATGCACTCTGCGCTATCC 59 10681110 10681128 CAAAGCCACCGTGTATACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 w-cup FBgn0032269 FBtr0080132 1 1 1 107 2L 10576836 10576854 TGCAAAGGAAGGTGAAGTC 58 10576687 10576771 CTGTGACTAGTAGATGTAGATAAGG 57 NA Drosophila melanogaster 61 mRpS7 FBgn0032236 FBtr0080007 3 1 1 121 2L 10386772 10386864 AAACTTCAAGGCTCAGCTG 58 10386947 10386967 CACATGGTAAAGCTTGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 1 2 2 80 2L 9643110 9643129 AAGAGCCTCGACTACAAGAC 59 9643170 9643261 CAATAGGTGATTTCTGCCCTG 59 NA Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 1 2 2 80 2L 9611432 9611450 CAAGGTTCTTAAGCGTCCT 57 9611493 9611571 TTGCCACAGGCATTATACTG 58 NA Drosophila melanogaster 61 CG34181 FBgn0085210 FBtr0112374 3 1 1 60 2L 9367862 9367882 TATCCTCGACGATTTATGCAC 58 9367904 9367922 AGGCCACAATCTCGATCAG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9541 FBgn0032083 FBtr0079785 1 1 1 80 2L 8972275 8972366 ATGTTGTTGGCCGTAAATGG 59 8972214 8972233 GCTCAGTATATCGAGGACGG 59 NA Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 1 1 1 79 2L 8519906 8519929 GCGAGTTTATCTATTAGTAAGGCC 59 8519967 8520085 AAACCGGCTCATCTTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12560 FBgn0031974 FBtr0300761 3 1 1 86 2L 8009185 8009263 TTCTAACGCTACGTTCGGA 58 8009117 8009135 CTAACGCTTTCGTCACTCG 59 NA Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0079532 2 1 2 113 2L 7999160 7999264 CAAACAAGTGAGCTATCTATCGAC 59 7999336 7999354 AAGGCCATTAGCTTCTCGG 59 NA Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 1 2 2 80 2L 7447295 7447519 GATCATGCACAAGGAAATGG 57 7447234 7447252 AGACTGAGATCAATTGGCG 57 NA Drosophila melanogaster 61 Coprox FBgn0021944 FBtr0079352 2 1 1 66 2L 6965519 6965537 TGATCTACGATCGTGGCAC 59 6965567 6965585 ATCAGGATGCTCTCGTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079315 3 1 2 113 2L 6686490 6686572 TTTATAAAGGCCACGATGGC 58 6686396 6686417 CATTGATTGACATTCTTCGGAG 57 NA InUTR Drosophila melanogaster 61 CG31633 FBgn0051633 FBtr0079325 1 1 1 80 2L 6655008 6655083 GCAAGGATGACTTGGTTTCG 59 6654947 6654969 GTGAATAGCTGCTACTAGTAGCA 59 NA Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079112 3 1 3 98 2L 5662973 5668955 CAACTAAAGGTCAACATGATGC 58 5669014 5669032 CTTTGCATAGTTACGGGCC 59 NA InUTR Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079104 1 1 2 91 2L 5554297 5554380 CGATTTCAACCATCGTATTCGT 59 5554430 5554450 GTATCTACGCAAACTGTGCTC 59 NA Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 3 1 1 63 2L 4977682 4977762 GATGTTCCGTGCTTCAAGG 59 4977789 4977807 CGGAACCTGCGATAATTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077606,FBtr0077605 3 3 3 91 2L 3292106 3292188 ATGTCCAGAGATATGTTTGCTG 58 3292036 3292055 CCACCTATCTGCCAGTAGAC 59 NA Drosophila melanogaster 61 v(2)k05816 FBgn0042627 FBtr0077657 1 1 1 80 2L 3054606 3054693 GTGGATTACAACCAGCTACTG 58 3054733 3054753 CAGAGTGTCTGCTAGTTTGTC 58 NA Drosophila melanogaster 61 CG31672 FBgn0028952 FBtr0077825 1 1 1 88 2L 2046210 2046438 TTCAAAGAGCCATACATGCA 57 2046489 2046507 TTATAGACTCCTGGCGCTC 58 NA Drosophila melanogaster 61 CG15357 FBgn0040719 FBtr0077871 1 1 1 60 2L 1945490 1945508 CGGATGGTTAAGTCTGGAG 57 1945448 1945466 CGATGAGGTAGAGTGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14339 FBgn0031301 FBtr0077954 2 1 1 81 2L 1112431 1112510 AGTACGCCAAGATAGAGCC 59 1112555 1112573 ACGGAGTCATAGTCGATGG 59 NA Drosophila melanogaster 61 CG4291 FBgn0031287 FBtr0078034 1 1 1 175 2L 851866 851884 AATGTCGACGAGGAAGTGG 59 851651 851727 TCAGGTGCTTTCACTTCCA 59 NA Drosophila melanogaster 61 CG3883 FBgn0031281 FBtr0078041 1 1 1 81 2L 815216 815289 TGGGAGCTGATCAATAATGTC 57 815155 815173 TTAGCACTTCGTTCACCAG 57 NA Drosophila melanogaster 61 Nle FBgn0021874 FBtr0078075 2 1 1 105 2L 567019 567096 TTTGAGCACTGAGGAATTGC 59 566933 566952 ATAGAGGGTGTTGTCATCCG 59 NA Drosophila melanogaster 61 Hop FBgn0024352 FBtr0078131 3 1 1 82 2L 296741 296761 CAGATCTTAAAGGATCCGGCT 59 296803 296988 TTCTGCAAGTGTTCTTTGACC 59 NA Drosophila melanogaster 61 CG11562 FBgn0031247 FBtr0078130 2 1 1 96 2L 292641 292660 TATAAACAATCGGCAGACCG 58 292775 292793 GCAGCGTGTAGGTATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 3 4 5 118 2L 344388 344406 AAAGATTAAGATCGCCGGC 58 344486 344571 GCGGAGAAAGACAATTAAGAC 57 NA Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 2 2 2 288 2L 542544 542565 AACTTATACCTTTAGCGAGCAC 58 542227 542245 TGTAATAGCAATGCCGGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568,FBtr0078072 1 2 2 81 2L 592323 592341 ACACTACCCAGATGTGGTG 59 584434 592279 CTTGAACCACACCTCAACTC 58 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987 2 1 2 100 2L 1117506 1128137 ACTTCATAGTGCCATCAGCA 59 1116672 1116690 CAGACCGAGATTGTGATGC 58 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 3 4 4 82 2L 2792365 2792496 ACGTTCACCTTTAAGAGTTTGC 59 2792304 2792322 GAGAAGCGATCGAAGTCGA 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 2 2 3 146 2L 2994936 2994954 CTGACGCTGTTCATGAACG 59 2995063 2995447 GTCGATGTTCGTCTGAAGGA 59 NA Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 1 1 1 66 2L 3529057 3529075 TCGATGCTGGATTTCTGCA 59 3528869 3528887 GGATTCGCATGCTATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 1 3 3 80 2L 3721528 3721551 CTGAATGAGTACTTCTTTGATCGG 59 3721587 3721663 ATAATGCAGCTTTCCAGTTCTG 59 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 1 5 6 90 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 3 4 4 80 2L 4343685 4343764 CATTCTGACCTTTCCCACC 58 4343807 4343826 AAGTAGAAGGCCTTCAAGGA 58 NA Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394 2 1 2 81 2L 4935902 4936122 AGAATCCATGGTTCCTCCG 59 4935839 4935860 GACTGACGTTCTTCATATCCAC 59 NA Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 3 2 2 77 2L 4954841 4954859 ATCTACTACGGAGCCACCT 59 4954782 4954800 GTGGTTCTGGATGAAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 3 5 8 97 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070167 5070186 GAAGATAGCGCTCTTGAGGA 59 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 1 2 2 182 2L 6008499 6008769 CTGTGCATGCAACAGATCC 59 6008335 6008355 GATCAGTAGTGCATACAGCAG 58 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 2 3 3 88 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095144 6095249 GGTAGAGCGGATTCATATTTGG 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 3 5 5 81 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 3 5 5 81 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0079431 2 1 2 145 2L 7016554 7016572 GACATCCTCTGCAATGGAG 58 7016365 7016448 CTATGTGAGTCAATGAAACTGC 57 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 1 2 3 80 2L 7059191 7060979 AGGAGGAGAAATCCAAGAACTC 59 7061018 7061038 GATTGAGAATCTTCTCGCCAC 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511 2 1 5 86 2L 7697150 7698737 CCTTACAACACTGAAAGACGA 58 7697084 7697102 GGATCCAGCAACTGTTACG 58 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 2 4 4 80 2L 7728554 7728577 GTGCCTTACTCATATTACCATTGG 59 7728433 7728516 CCAACGTGATCCTCAAAGTG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 3 4 4 80 2L 8187028 8187046 CTCTGATGTTCCTCTGCGA 59 8187090 8187176 TTTCCGTTTGCTGAGTTCC 58 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 2 2 2 85 2L 8364198 8364216 CAAGAAGGGTCTGACTCCC 59 8364069 8364087 TGTTTCCGTTGACGAAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 1 4 5 80 2L 9535893 9535999 ACCACTATATCGATCACTCCC 58 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 3 2 3 135 2L 9685193 9696200 TTACATCAGCCATTTCCCTC 57 9685077 9685095 TATCTTGTTGCGGTATCCG 57 NA InUTR Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 3 3 9 197 2L 9906105 9906123 GAATGATACGCGGAAGGTG 58 9905074 9905883 TAGTTTAGCTTGGGAGGCC 59 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 3 2 2 111 2L 9923292 9923376 AGGCAGTTGAGGATTCTACC 59 9923200 9923218 TAGCTACAAAGATCGCGCA 59 NA Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 2 2 2 89 2L 10343346 10343423 AATAATACTACCGTCAAACGCG 59 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 3 5 6 101 2L 10399596 10399614 AAATGCATCAGGGAAAGCA 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115 1 2 4 84 2L 11165642 11165660 AGACTGTATGGCACAAAGG 57 11163929 11165594 CCATGGAATCTCGAGATGG 57 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 1 4 4 101 2L 11258906 11258990 GAATACATTCGGCATGGGC 59 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 3 3 4 82 2L 11799399 11800169 TACTTTGGCATACAGGCGA 59 11799335 11799353 GTGGTTAAGCAAGTGCTCC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 5 6 100 2L 11835158 11835176 GAATATGTCGTTCACCGCC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 5 6 100 2L 11835158 11835176 GAATATGTCGTTCACCGCC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0301171 1 1 3 103 2L 11987772 11987790 CAAGAAGCACAAGGAGCAC 59 11987486 11987705 GCGGGATACTATCCGAGTC 59 NA Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 1 1 1 60 2L 12453009 12453029 CTTCGATTATTGGAAAGGCGT 59 12452867 12452886 TTACAATGGGATTGGCACAG 58 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090017,FBtr0090013,FBtr0090018,FBtr0090016,FBtr0090015,FBtr0090019,FBtr0090027,FBtr0090020 1 9 17 122 2L 12724235 12724253 TTTCGAGAAGCAAGTGCTG 58 12724339 12724485 GTGACCAAGGAAACCAGGA 59 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 3 4 4 85 2L 13209523 13209541 GTAGTCAGTTCTTGCCGAC 58 13209587 13209668 CACATAAACAATCTTATCGCCG 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080441 2 1 4 118 2L 13208766 13209479 TCGAGAAAGAAGGTTCTTCG 57 13209558 13209578 TGACTTTCCATCACTGAACTG 58 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996 1 1 3 83 2L 13785904 13785925 CTCTACAACTATTTGGGTTGTG 57 13785968 13786221 ACCGATACGGAAATCTAGGA 57 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080547 1 1 3 80 2L 13879690 13891304 CGAGAAACGTAAATCAGATTCG 58 13891345 13891363 ATTCCCAGCCTCAGATCTG 58 NA Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 1 2 2 80 2L 15046761 15046779 CTGTTCACAGGGTTTGCTC 59 15046640 15046717 CGATGCATTGAGTCCTGTG 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0100459,FBtr0080884,FBtr0080885 1 4 4 88 2L 16696754 16697511 TATGTTTAGGTGCAAGGGCA 59 16697562 16697580 ATGCCTTCTGTAGCACCTC 59 NA Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0114502 3 1 2 116 2L 16905388 16905509 GGCTTAAATAAAGTCCACAGC 57 16905587 16905670 TGCACCGTATTCGAATTCC 58 NA Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 1 1 1 89 2L 17182554 17182572 TGCTATCTTGGATAGCTGC 57 17183058 17183076 GAAGGAGGTTCTTTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 2 4 4 81 2L 17418041 17418060 TTCAAACAGATGGCCATAGC 58 17417634 17417999 GTTTCAGCTCCACATTAACAC 57 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 1 4 12 112 2L 17717920 17717939 AGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089317 3 1 4 102 2L 18859027 18859045 ATTTACGATTGCACCTGGC 58 18857395 18858963 GAGTAGAGATCATTGGGTGGT 59 NA Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 1 2 2 80 2L 19186181 19186258 AGGGCTATAAAGAGAAGGCA 58 19186301 19186319 CGAATATCCAGGACGTGAG 57 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 1 3 3 80 2L 19457150 19457231 GATGATTGCTCTACTAGTGACCT 59 19457270 19457289 GCGTTGAAGACCCAATTCTG 59 NA Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 1 2 2 90 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542981 19543631 CTTTATCAGCGTCGATCCAG 58 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268 3 1 7 61 2L 19577189 19577210 GACAAACGAAGAGCTAAATCCC 59 19571731 19571752 GCTCTTCTCGTTTCTGTATGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 1 3 3 88 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 1 2 3 110 2L 20061916 20061934 CAGGCCTCCAATATCTGGA 58 20062008 20062161 GTCGTTGTTGAGATCCAGC 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081353,FBtr0081352 1 2 5 157 2L 20334700 20334721 CGATACCAAAGAACTAGAGCAC 59 20336394 20336472 CACCTGCTTCATTGTTCAGG 59 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0301238 2 1 2 95 2L 21157776 21157795 TATGTTCTCAATCTGGTGCC 57 21157637 21157719 CTGACAGTTCATCGTATCCA 57 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 3 3 3 93 2L 21172391 21172470 ACGATAAGATCCAGCCCAC 59 21172527 21172545 TCGCCATTCTTGATTTCGG 58 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0085910 1 1 3 156 2L 21756617 21757172 CAATGCCAGAACTTACACCG 59 21743898 21743916 GAATGCTTGCAGTCTTCGG 59 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 3 3 4 98 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141760 22141846 ACAGCATCGATATCCTTAATCG 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 2 4 6 104 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737575 22741715 GAAAGCCAGTTGACTCTCG 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086058 1 2 4 85 2R 1604837 1604855 GAGTCCACAAGCGATAGCA 59 1604277 1604789 GAGAGGTAGAAGCGATCCTG 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 3 4 4 86 2R 1925633 1925653 ATTGAGATGGGCTTCAAACTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 1 4 5 81 2R 2503184 2503202 GAGCTGGAAGCTATCTCCA 58 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 1 4 4 69 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515399 2515417 TTAGCAGTGCCATAAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086136 1 1 7 150 2R 2618988 2619072 CCCGATTATGTATGATGGTAATCTC 59 2616496 2616514 TTTGTAATCGTTGGGCACG 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 2 3 5 123 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642302 2642320 TGTTGACCGAATTGCTCAC 58 NA Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 2 2 2 60 2R 2887114 2887132 GAGTTCGTCGATTTCTGGG 58 2887156 2887174 CGATGATCAGACTGCTCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 1 1 1 70 2R 2923895 2923913 GTTGCTTGTCATCGGAGAG 58 2924004 2924022 TTTGGTTCTTTACGCTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 2 2 59 102 2R 3238797 3249235 TTGGTCATCACAGAGCCTG 59 3238713 3238731 AAGTTAGGGCCAATTCGCT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050,FBtr0111096 3 2 59 80 2R 3227709 3227728 GCAATTATAGTTGTCGGGCC 59 3219874 3227666 ATCTGGGAGGTACGTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 1 3 59 80 2R 3236477 3246963 CCACAGCCTTTCTTTAGATGG 59 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089743 3 2 3 113 2R 3393999 3394017 CAAGATCTTGCAACGCCTG 59 3394092 3394177 TTTGTCAGATCGGTGTATCGA 59 NA Drosophila melanogaster 61 scra FBgn0261385 FBtr0088911,FBtr0088912 1 2 3 80 2R 3481270 3481403 ATATCTCCTTCTTGCAACCCA 59 3481442 3481463 GGACGAATACTGTTCTCAACTC 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088914,FBtr0088915 1 4 6 85 2R 3538303 3538374 AGGATGATGTGCCTGAACC 59 3538420 3538441 CTTAACAGATGGCATGGAATGG 59 NA Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 1 2 2 119 2R 3715846 3715926 TCTACCAAGTGGAGTACGC 58 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 1 2 2 119 2R 3718956 3719036 TCTACCAAGTGGAGTACGC 58 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG12822 FBgn0033229 FBtr0088842 1 1 2 80 2R 3720618 3720636 CCCGTGTTGGACATTAAGC 59 3720679 3720752 TCCAACAGAGGTTCTTCCTG 59 NA Nonspecific Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112578,FBtr0112580 2 4 4 88 2R 3724812 3724830 GAGTAAGAAACTACGCGCC 58 3724659 3724760 CTCCAAAGTCCTGAATGGC 58 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112579 1 1 4 80 2R 3733372 3734276 CATCGGCAAATACTTTCTCC 57 3733311 3733329 ATTAGCTCGGAGTATTCGC 57 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787 3 1 2 81 2R 4468412 4468545 ATATGCAAGGGAATAACAACCG 59 4468352 4468372 TCCATGGGATAACCAAGTCTG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 2 3 12 158 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007268 AACATTACCACCGGATTGC 58 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 3 3 3 107 2R 5021179 5021197 CTCGATGTACGCCTACCTG 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088620 2 1 2 178 2R 5051972 5052051 GAAACAAAGAGAATTGAGGAGC 58 5051759 5051777 AGATACTGAAGGCCGTAGC 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0302602 3 3 10 117 2R 5146430 5146448 AAGGACAGGTGATCCAAGG 59 5143530 5146349 AGACTAATACGGGCCTCCT 59 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 3 3 3 117 2R 5150100 5150177 ACAGGATGTCGACAAGACAG 59 5150002 5150020 GTTAAGAGCCCTCGAAGCA 59 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 2 2 2 88 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185036 5185786 GTATAGCTGATATGGCAGCCT 59 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892 1 1 2 80 2R 5320719 5321862 GACTGGTCCAATCAGAGCT 59 5321906 5321924 GTCCTGAAGAAAGTCGCAG 58 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 1 2 5 91 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354442 5354460 TATTCCAACGATGACGCTG 58 NA Drosophila melanogaster 61 CG1827 FBgn0033431 FBtr0273243 1 1 2 77 2R 5476729 5476747 AAATACTTCGCCCAAACCA 57 5476841 5476859 GTCTTATTCGCCTTCACGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 3 2 2 80 2R 5709940 5710024 GCAGTACATCTTTAGCAAGGAG 59 5709881 5709902 AGAAGTTCGAACTCAGATTCCA 59 NA Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 2 2 2 84 2R 5955471 5955492 TCTAAAGGTATCCAATCTGCTG 57 5955355 5955373 GGGATTGCTAAACATGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088420 2 1 3 101 2R 5997536 5997554 AAACACCTCCGATTAGGCA 59 5997665 5997747 GAGTATTTCCTGAAATATCTCGAGG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088276 2 1 12 132 2R 6500313 6500332 CCGCACTATACGAATTTGGA 58 6500425 6500499 TTAATGCATCTTTCTCGCCAG 59 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0114570,FBtr0088196 2 3 3 60 2R 7117374 7117455 CTGGGATCCTGCTCTTTCC 59 7117332 7117353 ATTGGATAGATTCTCCGACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 3 4 4 84 2R 7786481 7786499 ATCCTCCAAGGACAACGAG 59 7786135 7786435 GATGTCATTCTTTGGTGTGGT 58 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026 3 1 3 82 2R 7914456 7914474 GCTGCTTATTGCTGATCCC 59 7914334 7914410 ACTATGATGTGAGGCTGGC 59 NA Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 3 1 1 114 2R 8079382 8079400 CATCTCAATACTCGGCCTC 57 8079539 8079557 TATGTAGGTCATCGGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 garz FBgn0033714 FBtr0087897 3 1 2 157 2R 8220086 8220104 CCAACGAGTTAGTGGTGAG 57 8220225 8220311 CACAATAATGGGCTGAGCA 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 2 3 6 85 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548625 8548643 TGGACAGGATGACGATCAG 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087876,FBtr0300390,FBtr0087877,FBtr0301490 2 4 8 200 2R 8560839 8563642 ATAATGCCAAGCTCCATCG 58 8560657 8560678 CGTAGTTATTTAGCTTGTGCAC 58 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 1 4 4 135 2R 8641313 8641405 TTCATGTTTGGCAAGTGCA 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112741 1 1 2 132 2R 9046593 9047239 TCCCTACAAGATGAACGGTC 59 9047334 9047352 TTTCTCCCTTAGCTTCCGC 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 1 3 15 80 2R 9770046 9788956 GCATACGAACTAGATCAAGCAG 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100453 2 1 3 287 2R 9842221 9842239 GAGGTCATCTGGAGATCCG 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 3 4 4 87 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877050 9877070 GCTCCATTTCAATCTTGTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 3 4 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184215 TATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 2 4 6 80 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152254 11152334 TACACCAATCTCGAATCCCT 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0301313 2 1 7 111 2R 11651330 11651444 AAGGAGATCACCTCAGGAC 58 11651237 11651255 CGAATCCAATGTCCTGCAG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 2 8 13 84 2R 11837967 11838677 ATCTGGTACAAGGCGTGTC 59 11837901 11837919 TGATGTAGAGCGTCGACTG 59 NA Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 2 2 2 80 2R 11914691 11914710 CGTGATCACCTTCAACATCC 59 11914552 11914650 TTAAGTTGTTCAACTGTGGCC 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 3 2 2 80 2R 12544692 12544784 TCGGGATATTCCTATTGATGACTC 59 12544635 12544654 AAGGACGACAAGATGTAGCC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 3 3 5 154 2R 12566511 12566529 ATCCCGAGCTCTTCATTCC 59 12562745 12565928 CATCCAGTACTGATTTCCTCCT 59 NA Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 3 1 1 104 2R 12893929 12893947 GACCAGTTGAATCTGCTCC 58 12894296 12894314 GTCATTAGTGCCTTCCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 2 7 9 113 2R 12959348 12959484 AATCTGAAGACCAAGAGATCC 57 12959255 12959273 CATCGAATGGGACATCAGG 58 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336 3 1 2 81 2R 12991128 12991146 ATTAGCGCAGATCAGTCCA 58 12991189 12993119 GCGTAGAACGATAGTTTCTGG 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 3 3 8 82 2R 13408429 13410372 TAATGAATCTGTGCGGTCCT 59 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0086949 1 1 8 87 2R 13409395 13411596 TCTAACCGATTCGGGACTG 58 13408423 13409344 GAGTTTAGGACCTGAAGCG 58 NA Drosophila melanogaster 61 CG30108 FBgn0050108 FBtr0273298 2 1 1 60 2R 13557075 13557096 AAAGGTCAAATGGATGACTCAG 58 13557116 13557135 TGACGCATTCCTGATAAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 1 5 5 80 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042924 14042942 TAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 1 3 4 87 2R 14524313 14524400 GGAAACTGCTGAAACTTCTACC 59 14524247 14524266 TTCATCGTTTGCCTGTTCTG 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 2 5 5 84 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844995 14845243 ACTGCTAAGACTCTTGTACCTG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086509 1 2 4 97 2R 15130002 15130020 ATAGCGTTTCCTCGACCAG 59 15130078 15130217 CGGAGATTTCTGGTTATCTGTG 59 NA Drosophila melanogaster 61 CG11961 FBgn0034436 FBtr0086519,FBtr0086520 1 2 2 80 2R 15249504 15249525 TTACTTCATCTACTTCTCGTGG 57 15249565 15249645 CAATTTCCGTTGGGTTTCTC 57 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232 2 2 6 122 2R 15461675 15461693 GACATTTATGCCGGATGCT 58 15425703 15461512 CAATAGCGGTGGTTCTGTG 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 2 3 3 94 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148398 AATGTTCTTGGTCTTCGAATCG 59 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 1 3 3 81 2R 17069022 17069041 CTTCTACGGCAAAGTTTCCA 58 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 2 4 5 176 2R 17202259 17202341 TATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 2 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213336 18213357 CGTAGTCATATTGAGAGTCGCT 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 3 4 4 172 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 3 8 13 141 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814812 18814832 CGTGAATGTTTCTATGCAGGT 59 NA Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 2 1 1 154 2R 18841030 18841048 GAAATCTTGACGGTAGCGA 57 18839533 18839551 AGTCTTTCAGGTAGCTCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 1 2 13 83 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564628 19564646 GACTGTAGAGTCCCTCACG 58 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 2 2 2 82 2R 19701896 19701914 CAAGGTGGTGATCTTTGCA 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 2 2 4 117 2R 19833770 19833965 AATACCAAACGCCAATCGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 2 2 2 98 2R 20024113 20024137 CATCCAGTTATCAGTTTCTAGAGGA 59 20023981 20024057 TAAAGAAGTTCAGCGCCGA 59 NA Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 3 2 2 81 2R 20447024 20447042 GGAGGCCGAGAAGATACTG 59 20446639 20446980 GAAATGCCAAGTGTCGACTG 59 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 2 2 3 81 2R 20484168 20484189 CTCTGGCCTATATGTGAATGAG 58 20484231 20484302 GTCGTCCAGAGTCTTCTCC 59 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301851 1 1 5 167 2R 20771248 20774759 GACGACAGATTGAAGCATATTAGG 59 20774885 20774903 TGTCATCGGCTTAGGACTC 58 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092 2 2 3 93 2R 20925045 20925236 GATTCCTAGACACATCCAAGG 58 20925291 20925309 TCCATATACGCCTCGTCTG 58 NA Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 1 2 2 80 3L 197532 197602 TGAGGAGCTAGAGGTTCGT 59 197470 197488 TCATCGAATTCGATGCCCA 59 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 1 5 5 83 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241427 241445 TAATTTGTGGCTCGGTTGG 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 2 5 5 84 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241426 241445 GTAATTTGTGGCTCGGTTGG 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 2 5 6 82 3L 352341 352362 GTATCTCGAGTTATCCGAAAGG 58 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 1 2 4 125 3L 452934 452954 GCGATCTTCTATTTCAAGCAC 57 451763 452847 TTTCAGTATGTCGCCTCCA 58 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 2 2 2 84 3L 594776 594794 TACATACGATCGGTGTCCA 57 594842 594930 TTCCTTGGAGGTTGAAGTC 57 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 2 3 3 76 3L 1299143 1299161 ACTGTCTACGGCTTCATGG 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 3 3 3 84 3L 1299135 1299153 ACATGCAGACTGTCTACGG 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 1 4 4 80 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 3 4 4 112 3L 1551788 1551869 GCTATGTGGACGAGATCGT 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864 3 1 2 143 3L 1872468 1872598 AAGAGTTCAAAGCACAGTCG 58 1871908 1872362 CTTCGACGGGCTAGATGAG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 2 7 12 132 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463163 2463181 CCTTGAATAGCTGCTGGTG 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 2 6 15 80 3L 3083798 3085210 GCCACTTATATGGTCACGC 58 3085252 3085272 ATATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 1 6 15 80 3L 3083800 3085212 CACTTATATGGTCACGCCG 58 3085253 3085274 TGATATGGTGCATAGAAGTTGG 58 NA Drosophila melanogaster 61 CG12079 FBgn0035404 FBtr0073113 1 1 1 118 3L 3159443 3159461 AATCAGGAATCTGGGTGCC 59 3159283 3159301 CCTTCTTAGGCTCCACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 3 5 5 67 3L 3300763 3300781 GTAGTACCACCGATCTGGA 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0113138 3 1 2 189 3L 4363118 4363756 CGAAATTATTGGCAAGCGG 58 4338103 4338121 CGATCGCGTAAGAAGTTGG 59 NA Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 3 2 2 62 3L 4405803 4405824 CGATGTGGTCGAAATTAAGACC 59 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 2 5 5 93 3L 4505302 4505412 AAAGTTTGAACAGGTTCGCA 59 4505228 4505251 GGTAGAGCTCTTTATGAGATTTGC 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 3 2 5 139 3L 5160144 5161352 AATGTTACGGCTTCGTCGA 59 5157064 5160041 CTGTTCCTGTTGAATGGCC 59 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 2 2 3 189 3L 5566920 5568048 AATCATCAGGCCTACAAGC 57 5566749 5566768 AAGTCTCAAGCATTAGCTCC 57 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 2 2 6 134 3L 5763026 5764728 TGGACATGACAATAACGGC 58 5764826 5764844 GGATAGAGGACCCTCTTCG 58 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 2 6 6 78 3L 5765429 5765447 AACGGCTAGAGGATATGGG 58 5765546 5765564 CGCTCCAAAGAGAATTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 2 2 2 80 3L 7137995 7138070 GTTGATAAGAACAAACTGCAGC 58 7137936 7137954 CAGCTTCAGGTTAACGTCC 58 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 2 5 5 99 3L 7333783 7333801 CAGAGATCGCATGTACGGT 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0076861 2 1 3 104 3L 7461113 7461131 GAGGACCTGTACCGATCAG 59 7461194 7461276 GGAATACCTCAATGCATATGACTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782,FBtr0300499,FBtr0076776,FBtr0076777,FBtr0076775,FBtr0300500,FBtr0076780 1 7 7 93 3L 7811234 7811252 AATGTTGAGGCGCAAACAG 59 7810753 7811178 GGTCGGCATATTGTGTTACC 59 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 3 2 4 80 3L 8463409 8463432 CAAATATGCTTATACCTAGGGAGC 59 8463467 8463540 CCTGTAAATACTGTAGTTGGTCG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 2 3 13 163 3L 8627809 8627828 GACAGTATCATGAAGCAGCG 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302085 2 2 5 98 3L 8790237 8790256 AATCTCTGGTTAAGACCGCC 59 8790317 8791229 TGCGACGTAATGATTTGCG 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 3 2 4 82 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330140 9330160 TCAGACCATGAGAGTTCTTCG 59 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 1 3 3 97 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 3 2 2 83 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677483 9677504 AGAAGAGATACGAGACACTCTC 58 NA Drosophila melanogaster 61 CG18177 FBgn0036039 FBtr0089410,FBtr0114566,FBtr0089411 2 3 3 81 3L 9721521 9721612 ACGAGAAGAGAAGATTTACGCT 59 9721654 9721672 TAGGTGAATCCGTCCTTGC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 1 4 12 113 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 2 3 8 184 3L 9817719 9817740 GAAGAACAACAAGCCAAATGTG 59 9823878 9824110 TAAATGGGACCCTGAGGTG 58 NA Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 2 2 2 71 3L 9887484 9887502 TAAAGGAAGCAATTCCGCC 58 9887370 9887449 ATCGTTCTCGGATCATGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 3 2 2 81 3L 10630670 10630750 ATAAGAAACTGGGACGAGC 57 10630607 10630625 GATCGTAGGGTTTAGCCTG 57 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 2 3 3 97 3L 11051888 11051907 GAATGACTATGTGGCCAAGC 59 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 1 3 5 126 3L 11219784 11219803 CCTATGATCCCATGAAGGCA 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 2 3 5 127 3L 11219783 11219802 ACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 1 3 5 126 3L 11219784 11219803 CCTATGATCCCATGAAGGCA 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 2 5 5 116 3L 11694671 11694689 ACTACATATGCGCCTTCCT 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 3 4 4 93 3L 11873251 11873329 GCATCACAGTGTGATAATTCCA 59 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 3 6 6 86 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208827 12208845 GTTTGTCCTTTGACCAGGA 57 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075923 1 1 2 73 3L 12774583 12774602 TTAAGGAGGTGCATAAGCTG 57 12774695 12774713 GAACAAGATCGCTCACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 1 2 2 113 3L 14023963 14023981 AAGTCCAAGTATCCCAGCG 59 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42247 FBgn0259099 FBtr0299509,FBtr0299510 3 2 2 81 3L 14932884 14932962 AACTCCAATGGGTCCATGG 59 14933006 14933025 TAGTAGAGCAGTTCTCCGGA 59 NA Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654 2 1 2 82 3L 15124311 15124379 AGACCGGTGAATGTTCCAG 59 15124247 15124270 GTTCTTTATGTAGATCCGTTGGTG 59 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075542 3 1 3 61 3L 15803941 15806356 TTAGGCAAGAAAGCATCCG 58 15803898 15803916 TTTCCTCCGAAGGTTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 3 3 3 81 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302781,FBtr0302779 2 2 12 80 3L 16859981 16859999 ACCAAGGAACTCATGAGTG 57 16860041 16877033 TCTTATAATGGCACCCTTCTC 57 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 2 5 7 80 3L 16952972 16954606 CAGGAGCTACCAGATTCGAG 59 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 1 2 2 86 3L 17037746 17037820 TTACTTTGATCGGAGATGTACG 58 17037681 17037701 GCTTGACTATGAACTTGTTGC 58 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 3 3 3 87 3L 17873842 17873860 CTTCGATCGTCACTTGGGA 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095,FBtr0075096 3 3 4 133 3L 18667368 18667387 CTATAGCATCAAGCCTCCAG 57 18667190 18667272 GTTGGAGCATCAGATAGGG 57 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044 2 2 3 118 3L 19486221 19486612 CAATGAGGACACGCTTCTG 58 19486121 19486140 TGAACATCTCCAGATACGGT 58 NA Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 2 2 2 80 3L 19539056 19539245 ATTGTACAGGTTCATCTGTGTC 58 19539284 19539304 TCGATGATTATTTGTCCCGTG 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 3 6 6 92 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853564 19853582 CTCATCCTTCCTCTTGGGC 59 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920 2 1 2 85 3L 19890507 19902358 GCCACAAATCCATGCAGAG 59 19890440 19890458 CTGTGCAAGCGTATACGTG 59 NA InUTR Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302716 3 1 5 189 3L 20183911 20183929 CTTCATCCATGATCAGGCG 58 20151751 20183760 GAGACTCTTCGATTTCAGCTG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078313 1 1 5 81 3L 21193148 21193167 CAAGTCGAGTCTCTACGAGG 59 21192427 21193104 CTTCACGTGCATATGCTCC 59 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 1 2 2 109 3L 21513428 21513511 CTTACGGACAGGTTTACAAGG 58 21513582 21513600 ACGAACAGCTGTAATGGGA 59 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 1 3 3 119 3L 21719350 21719368 ATCATTCGCCCTCAAGGAG 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0112842 2 1 2 80 3L 22300692 22300711 GTCTTCCTCCCAATCCTCTC 59 22298849 22300649 TGCTGACTCACCTTACCTC 58 NA Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 2 1 1 60 3L 20446590 20446614 CCTGGAGACACTTAGAAATATTCTG 59 20447017 20447035 GATTGTATCCCAGGCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0078964 1 1 2 80 3R 23220 23238 CGGCCAATGTGATAAGGTG 59 23282 23474 TTGGCAATAGTCAGGGAGC 59 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 2 5 5 128 3R 66128 66146 AGCAAGAGGACTTGGACTC 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0100500 2 1 21 168 3R 117977 120845 GAACTTCTGTTCCATGCGC 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568 2 1 2 127 3R 340834 348720 CTATATTGGCGCTGCACAC 59 340725 340743 TGAATTCCAGGAGAGTGGC 59 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 1 3 3 95 3R 525963 525981 AACGACCTGAGTGATTTGG 57 526040 526888 ATGGTCGCTCATAACACTG 57 NA Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 1 1 1 68 3R 758291 758312 CCACCAATATCAAGTTCAAGAG 57 758480 758498 CTACGCTCTGATATCACCG 57 NA DesignNoJunction Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 2 5 5 86 3R 1684299 1684375 TCTTCTTCCAAGCCAAGGT 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 3 4 4 88 3R 2211841 2211860 CAACAAGTACGACACCTGTG 59 2211910 2212066 TGTGATAGGGATGTGAGCAG 59 NA Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 3 2 2 114 3R 2268842 2268860 TATTTCCACGAGGAGCAGC 59 2268937 2269169 CTGCTAGACCTTCCAATGGA 59 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 2 3 3 158 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651401 2666964 ATTCACAGTACTCGTCCCG 59 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 2 3 3 158 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651401 2666964 ATTCACAGTACTCGTCCCG 59 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113345 2 1 2 81 3R 3613167 3613251 AAATTAGCCCTGAAATGGCT 57 3613105 3613125 GATGAGGGACAATTGATTGGA 58 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0081773 1 1 2 84 3R 3627696 3627714 ATCCGGTTTACAACAGTGG 57 3627566 3627649 ACATATACGGCATTGACTCG 58 NA Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 1 2 2 80 3R 3670934 3670952 TTGATAGCCACCATCAGGA 58 3670995 3671117 GTTTGGATTGAGCAGGTAGG 58 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 3 3 3 102 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830325 TTTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 3 2 2 136 3R 5192547 5192623 AGATTATTGGTGTGGAGTCG 57 5192722 5192740 GGCATAGGCATTATAGCCA 57 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 3 5 14 97 3R 5258549 5269739 CATTTCAGTTCCGGTGAGTC 59 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 2 2 4 99 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515509 5515528 TAGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833 1 1 4 80 3R 5521146 5521165 GCACTCTCCTACCACTATCC 59 5520519 5521106 AGCGCAACTAATTATCGAATGG 59 NA Nonspecific Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 3 1 1 64 3R 5642489 5642508 TACAACATCGGACAAGTCCT 58 5642372 5642391 ACGAATAACAGATGGATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31477 FBgn0051477 FBtr0082180,FBtr0113408 1 2 2 131 3R 5947595 5947613 CTTTACCAATCGTGTGCGA 58 5947761 5947784 GGATATAGGTAATACCCAGATCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 2 2 8 85 3R 5955358 5960548 GCCAGCAAGTAATGGAGAG 58 5955291 5955310 ATATGATGTCTGCATCCGTG 58 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 3 1 1 72 3R 6586343 6586362 TATCCTGAATCCTGACAGCC 59 6586229 6586247 ATGCATGTTGACGAACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 2 3 5 86 3R 7048442 7049127 ACAAGAACTGGTACAAGAGCA 59 7049175 7049193 TCTCGATGCTCTTCTTGCC 59 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100462 1 1 4 266 3R 7387975 7387993 CATCGCCACTTCACTTCAC 59 7386732 7386750 ATACTCGGTGGGATAGGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100525 3 1 2 80 3R 8221479 8221497 TCCTGGTTAGAACCAAGCG 59 8221293 8221439 GTAGAACTTCAAACACCTGATCC 59 NA Nonspecific Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 3 3 3 175 3R 8450830 8450848 GTAAGGACCACTCTGACGT 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 3 3 3 175 3R 8450830 8450848 GTAAGGACCACTCTGACGT 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0082730 3 1 3 71 3R 8787196 8787214 CAATACGCAACCATCTCGC 59 8786018 8786036 TAAACTTTACGTCCGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 3 5 5 82 3R 8845522 8845622 GAAATACACGAGAAGGTCCT 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082856 2 1 4 87 3R 9462244 9468036 TATGACTACGGTTATGGCGG 59 9462176 9462194 TTTAGTAGGGCTGATGCCG 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 1 2 4 123 3R 9468114 9468132 GACGGACAGGGATCATACG 59 9462789 9468027 AACCGTAGCCGTCATAACC 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 3 5 5 138 3R 9476209 9476539 CAACAAGGGTGACTTTGAGC 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 3 2 2 80 3R 9536989 9537007 CAAGTTGCTGATTCTCGGG 58 9536736 9536949 GCTTCACCAATGTCATAATAGGG 59 NA Nonspecific Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 1 2 2 80 3R 10717530 10717549 TTCAACACATGCTACAAGGA 57 10717592 10717684 GAAGAGCATATCCTCGCAC 58 NA Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 2 3 3 91 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616531 11616550 GTGTAGCTTCTCACTGTTGC 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110974,FBtr0083229,FBtr0083231 2 3 6 113 3R 11922944 11922962 GTAGCATCTGTGATGACGC 58 11922787 11922867 AAAGCGATTCTTGAGCCCT 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0100110,FBtr0083254 2 2 2 95 3R 12006909 12010689 CTAATTGCGCTCGTTTGCA 59 12010748 12010766 TTGACCAGGTGATGCTACC 59 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 1 4 4 80 3R 13519321 13519448 CCACCAGATCAAAGTCCAC 58 13519259 13519277 CCTAGCATTGTAGCCTGGA 58 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 2 4 4 80 3R 13678782 13678802 ATCTGCAGATTGTCCTTTCTG 58 13678843 13683518 AGTTGCCGACCTTAAATACG 58 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 2 3 3 82 3R 13953368 13956126 CCCATTACTGGTTCCATCGA 59 13956171 13956189 CAATGTGACAACACGGGAC 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083568 2 1 4 83 3R 14073859 14073946 ATATGCAGGCAGAAGACCC 59 14073992 14074011 ATTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 1 2 2 80 3R 14419607 14419628 ATTACTGTGATCTCAATGGAGG 57 14419481 14419566 CGCAAGTTAAGGCAATCTG 57 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 2 5 5 104 3R 14751506 14751633 GAATGATGATCGGTTCGAGG 58 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0083765,FBtr0110915 2 7 8 110 3R 15418744 15418762 AACCCAATACCCTCCAGAC 58 15418833 15420230 TTGAGTTCTTTGAGTTGTGCTC 59 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 3 3 3 88 3R 15480633 15480718 GATTGGGAATGATTTACGCCA 59 15480565 15480583 AATGGGCGAGTTTGTTTCC 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301379 1 1 7 107 3R 15590037 15590055 CCTATACGAAGGCCATCGA 58 15590126 15590283 ATGTGGTTACTGATCGGGA 58 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083842 2 1 2 100 3R 15845466 15846015 TAAACGAAAGCAACTTCGAGC 59 15845386 15845406 CATCAGCACGATATTGGACTC 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 1 2 8 80 3R 16146585 16147205 TGAACGTGAAGGATTTGGAC 58 16147248 16147266 ATTCGGATTCCGACTCCAG 59 NA Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 3 2 2 129 3R 16384799 16384817 CAAATGGTAGCCCATGCAG 59 16384907 16384992 GATTGACCGCTTGTTGTATCTC 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 1 2 8 80 3R 16576465 16580694 CGCTATGCTCATTCGATGG 59 16580736 16580756 GTCCGATAGTCGATAATGGTG 58 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 3 5 8 87 3R 16624124 16631682 TGAATACGTAGTCGGTAAACGT 59 16631730 16631748 TCCTATTAAACCGCTCGGG 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 1 9 9 151 3R 16791626 16791644 GATCATTGTCGAGGGTTGC 59 16791759 16792135 AAATCATGTCAGCAGCCTG 58 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 3 3 3 115 3R 16837648 16837666 CTACAGTCGACAAGCTGGT 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 1 3 3 87 3R 16837130 16837658 AATTCAAGGCTACAGTCGAC 58 16837706 16837726 TCTTTGAACTGTTCCTTCCAC 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 1 3 4 172 3R 16881620 16881699 TTTGTTAATGGACTGGGCA 57 16881403 16881422 ACAAGGTAGAGGTTGAACAG 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 1 3 16 93 3R 17010984 17011004 TTGATGTGCAATCCTTACCAG 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 3 2 16 158 3R 16980784 16980964 ATGCCCACGTCTAATTATGG 57 16981085 16981103 GATGTCGAAGTCCCATTCG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 1 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084075 1 1 22 171 3R 17183916 17200789 GGCTCAAGCCAAATTCGAC 59 17183763 17183783 GATGTGACGATTGAAGGTGTG 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 2 5 5 60 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18184313 18184331 GTCGAATGTAGTGAAGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 1 2 2 103 3R 18313105 18313241 GTTCGAGCAGGAGATTACCA 59 18313307 18313325 TGGGTTGAAAGGTTCCCAG 59 NA Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0084260 2 1 3 142 3R 18340765 18340783 GATAGTTGCATCACTCCGC 58 18340888 18342355 GGAAACAGACTCTTGAGGGT 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 1 2 6 112 3R 19095556 19095574 TTGGCAGACTGACTAGTGG 59 19095315 19095480 TGTGATTGGATTGCAGTCG 58 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 2 2 6 113 3R 19095557 19095575 CTTGGCAGACTGACTAGTG 57 19095315 19095480 TGTGATTGGATTGCAGTCG 58 NA Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 1 1 1 60 3R 19228920 19228938 CAGCTACTTAAGGTCGTGG 57 19229509 19229530 AGCTGTAGACAATCAAAGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 nau FBgn0002922 FBtr0084472 2 1 2 192 3R 19542233 19542251 ATATCGAGAGCCTGGAGGA 59 19538852 19538930 CCATCAAAGTCTGTAAACTGACC 59 NA Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 2 1 1 101 3R 19758875 19758893 CACCAAGGTCTATAGCGGG 59 19758722 19758740 GCTTCCAAGGCTTGAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 1 4 4 88 3R 19815554 19815572 AACTGCTCGCCTAAAGGAG 59 19815424 19815504 TATTTCCAGTTGTCTGCTCCA 59 NA Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084595 2 1 2 138 3R 19861439 19861458 GGACTATCTAATGCAGCCCT 59 19860736 19861338 GAATTGCCTCAGGTGAGGA 59 NA Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 1 2 2 80 3R 20061613 20061632 GGAAGAGTCGGAAGACTCTG 59 20061671 20061764 TTGTCCTGTAGCACATCTATCTC 59 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0084602 1 1 2 100 3R 20116722 20116740 TATGACCTTCGTAAAGCCG 57 20116865 20117242 CAATGGCAACTGTGTTGTC 57 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0084603 1 1 2 95 3R 20132597 20133927 GCTCATCGGGTTACAACTG 58 20133986 20134004 GACACTTTCCATTGGTGGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100629,FBtr0301582,FBtr0301581 3 3 18 84 3R 20525148 20527827 AATGAACACCATCCTGCAC 58 20527872 20528751 TGATATCACCCGATACAGATCC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0301581,FBtr0100637 1 4 18 95 3R 20508111 20512918 AAAGGGCGAAGACATATTGTG 59 20512975 20512993 GACATCCTCCCGATCTTCG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0100637 3 3 18 140 3R 20508114 20512919 GGGCGAAGACATATTGTGG 58 20515047 20515065 AAGTTCCAAATCGGGTGGT 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 1 5 5 60 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084953 1 1 3 94 3R 21817554 21818534 TTCCCACTCTTCAGGAACG 59 21818592 21818610 TTGAATGGACAGGTCAGGT 58 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 3 3 3 87 3R 21884734 21884752 GACTCTGAGACGACGTCTG 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 3 3 9 96 3R 22699711 22699801 ACAGCTACCCATATACGGG 58 22699633 22699651 CCATTGGATACGCCAACAG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0112834 2 2 12 92 3R 22892850 22892868 TGATGAGGGAGTTGTCCTC 58 22892166 22892340 CGATACTTGGTATCCGATGGA 59 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 3 4 4 196 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463958 23463977 CATTTCGAGGTGACGTTCTC 59 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 3 5 5 149 3R 23529755 23529774 GATCCGATGTACACCAAGAG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289997,FBtr0289996 3 2 2 82 3R 24671711 24678607 AATACGGAGTTGCCATCCA 59 24678653 24678671 CACAATGTCCACGGAATCG 59 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 2 3 3 110 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046234 25046252 CCGAACTTGAAGTTGTCGG 59 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 3 3 3 144 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046268 25046286 CTTCTTGAGGAACTCAGCC 57 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 2 3 4 80 3R 25327202 25327436 TTGGACCATCAGACTAATCCA 58 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 2 2 2 188 3R 25547145 25547374 AAATGAGAGGCTCCCTTACC 59 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 2 4 5 82 3R 25857056 25857153 GCCATCTACAGATTCTTGCG 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 1 2 2 80 3R 25991696 25991773 TGAATGCCAACATTGAAGTGG 59 25991636 25991654 CTTCGTTGTAGGCCAACAG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 3 4 5 135 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211856 26211874 GTTGTAGGGCTTGTTCTCG 58 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 1 5 5 81 3R 26289005 26289024 TCTGCTCTATGACATCTCCA 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 1 10 12 113 3R 26398693 26398711 TGGTGGAGAAGAACTCGTC 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 1 2 2 87 3R 27617575 27617593 GATCCATTTGTTGCCACCC 59 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 1 22 22 80 3R 27677891 27678327 TTAAGCAACATTCCCTCATCC 58 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250,FBtr0301249 1 2 4 133 3R 5377424 5377443 GCAATTTGGACTCGATAGGA 57 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 1 3 3 80 4 87356 87475 ACAAGTACAGGTCGATGGT 58 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 1 8 8 166 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158059 TAAACCAATTGCTTGCAGC 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 2 5 6 199 4 323146 325653 TTATAGTCTTCGGGCTGCT 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 3 4 4 83 4 596940 597612 TTAACGGAAACGATGACCAC 58 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 1 2 2 80 4 604478 604568 GGATCTCCTTAGCATCCCA 58 604609 604630 AATAGGTAACGAGATCCATCAG 57 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0100296 3 1 5 163 4 1043002 1043021 AGAAGGGAATACACCAACGA 58 1036237 1042878 GTTCTCCACTCGTTAGAACAC 58 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 2 1 2 294 4 1052221 1052239 CTGATGTGGCTGAGTAGAG 57 1051128 1051150 CATAGATCTCAAATAGCCCAGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sv FBgn0005561 FBtr0089328,FBtr0301563 2 2 8 135 4 1128953 1131407 CAATCGGACCTTCCATTGG 58 1131503 1131923 TAGGACGAATTTATCAAGCCAC 58 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091632 1 1 3 84 4 1259715 1260196 AGAACTGATGCTCCGACAC 59 1260243 1260262 GTACCCAACCCGAAGTAGAG 59 NA Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 2 2 2 88 U 1911199 1911217 GACCGTAATCCAGAAAGCC 58 1911269 1937082 TCCATGAAGCACTTTGGAG 57 NA Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 3 1 1 61 U 2759808 2759826 ACACTTCATGACAGTACGG 57 2759711 2759731 TCTGGTTTCATAGTAACAGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114270,FBtr0114272,FBtr0114271,FBtr0114269 2 4 4 104 U 3449415 3449487 TTTCTGAAGCAAAGTCCCA 57 3449555 3449573 CTTGATACTGATCTCCCGC 57 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0112920,FBtr0112919 1 2 3 80 X 31081 31100 CATATTACGCACCATTTCGC 58 31143 32455 GCCGAAACTAAGTTCTTGC 57 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 3 2 4 93 X 516384 516491 ATATCAGGATTGCAGCTTCCA 59 516546 516564 TTGAGGAAAGTCTGCACGT 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 2 4 5 88 X 1787492 1787510 CATATGAGGGCCTGTACGG 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 77 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 78 X 1965424 1965442 CAAGGAGTACAAGACCACG 57 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458 1 1 3 138 X 2341622 2341701 ATGTTCAGAATTCGAGCATGG 59 2341504 2341522 AACATGCGATACTGCACCT 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 3 2 12 179 X 3208475 3208494 ATGTGCTCCGATCTAATGAC 57 3208636 3215086 TTCTACATCGAAACTGCCC 57 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 2 4 12 122 X 3175075 3175093 TTTGAGTCCAATTCACGCA 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 3 2 3 132 X 3373525 3373543 TCATTGGGTTTAAGGCCAC 58 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 1 2 2 83 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515240 4515258 TAGCGGCAGTTAAAGGGAC 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 2 5 5 114 X 4962726 4962744 CAATCTCTGCGAGAAGAGC 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 3 4 4 80 X 5317036 5317157 TTAGAACACTACCAGACACCT 58 5317199 5317217 CTCATAGCACCAGATGTCG 57 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 3 3 3 92 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654770 5654791 CATGTATAACTCCATCTCCTCG 58 NA Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 3 3 3 120 X 6649037 6649055 TGATGAACAACATTGGCGG 59 6649136 6649217 AAGAGAATAGAACTGATGCCGT 59 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 3 6 6 116 X 7944307 7944478 CCAAGAAAGATGAGTCCGC 58 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 1 3 7 98 X 8111098 8117669 TAAAGCAATGGAATCGCCG 59 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271,FBtr0071270 1 2 10 80 X 8770360 8770380 CATTTAGAGACGAGCGAAGAG 58 8769882 8770072 CTGGTTCATCACCCATGTC 58 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 2 2 2 96 X 9091371 9091389 CAAGGATGTGATCGGAGCA 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 85 X 9524046 9524066 GCCGTCGGATTATATTAATGC 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0071429 3 1 2 85 X 9858451 9858471 AGCTTAATGAGCTACAGGGAC 59 9858315 9858404 CAATGGGCGAAGTAACCTG 58 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0112970 1 1 2 80 X 9873018 9873100 GATATCCACTTTATTTGGACCTGG 59 9872961 9872979 AGAAGACCAGAGATCAGCG 58 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0273444 1 1 2 143 X 10504473 10504491 ACTACCTGGAGATGCATCG 59 10502861 10504366 CTTCAGCCATATCGCTGTG 58 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 2 4 4 136 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672354 10672372 GAAGAGTCCAAAGACACCG 58 NA Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 1 2 2 264 X 10947215 10947383 AATAGTGTGCTGCGAACCT 59 10946793 10946811 TCAGGTTGCAATAAACCGG 58 NA DesignRelaxed Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 1 3 4 96 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 3 6 6 80 X 11231781 11231800 CAAGTCCCAGCTTAATGACG 59 11231667 11231739 TCCGGTATATCATTGCTTGC 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 2 7 15 108 X 11275917 11275936 ATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 2 2 10 88 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848307 11856054 GAGTTCGAATCATCGTGCC 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 3 2 6 176 X 12534705 12534725 GGTACCGAATATGGACTTGTC 58 12534863 12542578 GCCGTTGATCTGATCTGAG 58 NA Drosophila melanogaster 61 CG4407 FBgn0030431 FBtr0073695 1 1 2 95 X 12796994 12797374 CATGAGCTATTGGCGTGTG 59 12796917 12796936 CATTCGTTCATGGTGCTCAG 59 NA InUTR Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301046 2 1 4 82 X 13731939 13731957 GGATCGATGGGAAATCAGC 58 13731781 13731893 GCGAGATCACTGAGATCGT 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 1 3 3 80 X 14143260 14143278 GAAACGTGAAGCTAACCGA 58 14143319 14143417 ATCCCTTCATATGCTCAAACTC 58 NA Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073944 1 1 2 106 X 14485108 14485360 TAACAGAGGACATAATGTGCCA 59 14485023 14485041 CTGATGAGTCGGTCTCTGG 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 3 8 8 130 X 14825230 14825249 AGCAGATCGAGATTGAGTCG 59 14825341 14825847 GATGGTCTGACATTGCTTGG 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 1 5 9 129 X 15714511 15714529 CAGGAAGCAAGTCAGTTCG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 1 5 9 129 X 15714511 15714529 CAGGAAGCAAGTCAGTTCG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 2 3 3 98 X 15744650 15744668 TAACCTTAGGAGCACTGGG 58 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 1 2 2 79 X 15782410 15782428 TTAAGTGCCGTGGAAATGG 58 15782274 15782293 AATAGCTTACCAACCAGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299536 3 1 3 83 X 15843021 15844388 GCAGAAGCTGTCTGATGAC 58 15842956 15842974 AATACCACGACGGATACCA 58 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 1 4 4 80 X 15975871 15975890 CCAAATGAACTTTCCGTGTG 58 15975307 15975831 GTAAAGAATCTTTACCGCTCCT 58 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074302 3 1 2 106 X 16313075 16314093 TGTATCCCTTCGGAACTCC 58 16312987 16313006 GTCCTCATCTGTTCCAAAGC 59 NA Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074290 1 1 2 80 X 16486765 16486984 GAGTTCCAATCGACAAAGAAGAG 59 16486707 16486728 CCTTCTTGTTGAGGAAGTACTG 58 NA Drosophila melanogaster 61 r FBgn0003189 FBtr0089734 1 1 2 80 X 16554607 16554625 GCCAAGATGGGTTACAAGC 59 16554667 16559232 CACGGATTCCACATTAACTCC 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 3 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 2 2 6 60 X 17784662 17784683 CTGTTCAACATCTATCGCAAGG 59 17784704 17790576 GACCGATGCTATATGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 3 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 2 5 6 84 X 18286925 18301830 GAGTGTTTGTGAACAGATCG 57 18286786 18286878 GACTTGTACTCTGCCAAGG 57 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 1 3 3 89 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 2 2 2 112 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362444 TATTGGCATACGCATCATCC 58 NA Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 1 1 1 60 X 19572309 19572328 CAATGTGATCCTCTTCAGCA 58 19572186 19572204 GATCACGTACAGTTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 1 3 3 80 X 19795512 19795911 CCGTATATGGAATATCCACCG 58 19795952 19795971 AATATGAGGCCCAGTATGGA 58 NA Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0300210 1 1 2 81 X 20338728 20338746 AGTTTACTGGGACTCAGCA 58 20338791 20339585 GTCTGGAGGGAACTCTACG 58 NA Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 1 1 1 192 X 20606912 20606931 GAACAAAGTCAAGGCTTCAC 57 20606676 20606694 AAGCAGGATCAGTGTCCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 2 2 3 192 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077431 21077449 TTTGAGTTGGGTAGGCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 1 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073626 3 1 3 200 X 11985544 11985615 CACACCTTATACTTCTAGCGC 58 11985839 11985858 ATCAAGTGTGCGTTTCTCAG 58 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 1 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 mir-2a-1 FBgn0046826 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30297 FBgn0050297 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-285 FBgn0082174 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:F2:89BC FBgn0011858 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31471 FBgn0051471 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31506 FBgn0051506 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:ND6 FBgn0013685 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:C FBgn0013690 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 3 4 4 97 XHet 9417 9492 GAGCTGGCATGACAATACC 58 9551 9571 GTCGTGCATAACACAAATGAG 58 NA Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 3 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 1 1 1 95 X 21064961 21065098 CATCTTCTTGCTAATTAGGATCGTC 59 21065151 21065169 TAATAGGCTCTGCTCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Ser6 FBgn0011834 FBtr0077272 1 1 1 60 X 20834308 20834328 ACCAGAACCTACATCTTAACC 57 20834268 20834286 TCACATGATTCACGTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15452 FBgn0031130 FBtr0077292 1 1 1 91 X 20616443 20616721 ATCGATGTGCCATGATTCG 58 20616370 20616388 TATCCTGTTCGACCTCCTC 57 NA Drosophila melanogaster 61 CG15460 FBgn0031104 FBtr0302241 1 1 1 80 X 20261520 20261538 GCAGCCTAACAGAAGTCCT 59 20261402 20261476 TCCAGCATGAGCAAATTGC 59 NA Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 3 3 3 80 X 19795510 19795910 GACCGTATATGGAATATCCACC 58 19795951 19795969 TATGAGGCCCAGTATGGAC 58 NA Drosophila melanogaster 61 CG14234 FBgn0031065 FBtr0074790 3 1 1 92 X 19631540 19631558 TCTCACCTCCAGCATTGTG 59 19631611 19631745 ATGCCGATTATCCAATTGATGG 59 NA Drosophila melanogaster 61 CG12237 FBgn0031048 FBtr0074761 2 1 1 62 X 19536353 19536371 CATCAGTGACTCGAACAGC 58 19536309 19536327 CAATCGGCCAAGTTATGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12203 FBgn0031021 FBtr0074712 1 1 1 88 X 19386973 19386991 AAATCGAGTTCGACAACCG 58 19387102 19387120 CTGCACGTTCATGTTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Nat1 FBgn0031020 FBtr0074711 1 1 1 95 X 19376333 19376351 AAGGGTCGCATCTTTAAGC 58 19376410 19376494 ATTGATGTAGCGATCTGCC 57 NA Drosophila melanogaster 61 CG42302 FBgn0259198 FBtr0299682 3 1 1 68 X 18619512 18619531 GTATGTATCGCTATGCCGGA 59 18619463 18619481 ATCCATACAGTTGGCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15047 FBgn0030938 FBtr0074596 1 1 1 72 X 18423091 18423109 ATCAGAGGATCGCACAGAC 59 18423145 18423163 GACAGTAGCAGTTCCATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15044 FBgn0030928 FBtr0074627 2 1 1 60 X 18385865 18385883 CATCATGGCATCGGTATCC 58 18385823 18385844 GTCCGTATAGTAGAGATCGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34328 FBgn0085357 FBtr0112530 1 1 1 60 X 18293831 18293852 CCACTTCAACATAGTGAACTCC 59 18293792 18293810 GTGAAAGGGATTGCGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 1 2 2 97 X 17320862 17320880 CTAACCCGTCTCTGTGAGC 59 17320940 17321461 ACAAAGCGGTATAGTCTGGG 59 NA Drosophila melanogaster 61 CG5070 FBgn0030824 FBtr0074389 2 1 1 60 X 17097256 17097275 TAGTAGTTGCGATGGTTTCC 57 17097296 17097316 AGATTAAGCTTGCCAAAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS5a FBgn0002590 FBtr0074406 1 1 1 186 X 17039108 17039126 GACTCCACCCGTATTGGAC 59 17037795 17038659 TGGAAGATCCCTTAGCAGC 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 2 3 3 60 X 17031947 17032021 AAACTGTGCCCAATCTTCG 58 17031905 17031923 AGAGACTATTGCTGGCCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 rok FBgn0026181 FBtr0074286 2 1 1 83 X 16524582 16526485 CATTTCAGGATGCCAAATACCT 59 16524520 16524538 TGTCGTAGTCACCCATCAG 58 NA Drosophila melanogaster 61 Pp2B-14D FBgn0011826 FBtr0074294 3 1 1 61 X 16453037 16453055 AAATCATCCAGGACGGAGC 59 16452994 16453013 CGCCTCAATATCGATCATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4420 FBgn0030753 FBtr0074278 1 1 1 85 X 16337943 16337962 ATATCCAGGATAACATGGCG 57 16338007 16338092 CACTTTGCAGTTGATATAGAGC 57 NA Drosophila melanogaster 61 CG12507 FBgn0030729 FBtr0290087 3 1 1 89 X 16159851 16160071 CGCTACGACAGATATGATGAG 58 16159782 16159800 ATACGGATCGAAACGTTGC 58 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 3 5 5 81 X 15749871 15749891 TCTATAATCGCGTTGGAATGG 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG8184 FBgn0030674 FBtr0074082 2 1 1 80 X 15620696 15620776 CAATGCCTTATCAAGGTTCCAG 59 15620815 15620835 CTCGCATCATACCAAATGGAG 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 1 8 8 128 X 14825231 14825249 GCAGATCGAGATTGAGTCG 58 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 2 2 4 125 X 14726981 14727182 AGTAATCCGAACGACAGCA 59 14727268 14727289 CATTATTTAGTCGGTGGTACGT 58 NA InUTR Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0114621,FBtr0073990 1 2 4 109 X 14725202 14725220 CAATGCCCTCAAGATGTGC 59 14724367 14725129 TCTCGTAGTATGGCCTGGA 59 NA Drosophila melanogaster 61 CG5321 FBgn0030575 FBtr0290021 3 1 1 81 X 14574483 14574502 GTCGATTGGAACGACATTGG 59 14574546 14574635 CCTCGTCCAAGCAAATGAC 59 NA Drosophila melanogaster 61 NetA FBgn0015773 FBtr0073942 1 1 1 80 X 14498822 14498840 ATGACCTGGATCATACCGA 57 14498642 14498781 ACCCAAGATCAAATAGGATCTG 57 NA Drosophila melanogaster 61 nmdyn-D6 FBgn0030573 FBtr0073933 2 1 1 115 X 14477975 14478069 TTTATGAACAGCGGACCCA 59 14478148 14478166 TTGGGATCACTGTACACGG 59 NA Drosophila melanogaster 61 na FBgn0002917 FBtr0112815 3 1 1 80 X 14163269 14163351 ATCTTCAAACGTTCGAGCC 58 14163393 14163413 TCCTAGCAAACCATATAGGGA 57 NA Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073763 1 1 2 149 X 13223945 13223964 GGAAGTCAAGCAATTACCGA 58 13225233 13225251 ATTTGCCCTTGTAGTCGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15721 FBgn0030438 FBtr0073715 3 1 1 90 X 12864983 12865075 CTAACTGGCATAAACTGGGA 57 12865127 12865146 CTGGATTGTACTGATCCTGG 57 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 1 2 2 92 X 11888947 11889034 ACCTATAAGATTGGAGCACTGG 59 11888876 11888894 TTGTCCACTATCCGTGCAG 59 NA Drosophila melanogaster 61 CG2025 FBgn0030344 FBtr0073601 3 1 1 80 X 11760457 11760477 TCTGCCTTTGTAAAGAACCAG 58 11760332 11760419 GAGACGAATATCTCTGTTGAGTG 58 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073527,FBtr0073526 1 2 2 88 X 11581656 11583239 CAAAGAGTCTTCGTTCCGC 59 11583291 11583309 GATCCTCGATGGTCATCGA 58 NA Drosophila melanogaster 61 CG11696 FBgn0030314 FBtr0073512 1 1 1 80 X 11469163 11469183 ACCATGCATCTTAAAGGACAC 58 11469225 11469302 AAACTTGGTGCGGAATGTC 59 NA Drosophila melanogaster 61 CG1756 FBgn0030303 FBtr0073502 3 1 1 82 X 11369554 11369627 TTTGGTGCCAAAGAAACCC 59 11369672 11369691 CAATGATGGTCGATGTCAGG 58 NA Drosophila melanogaster 61 Gr10b FBgn0030297 FBtr0073550 2 1 1 80 X 11307030 11307053 CCTCTACTATAGATACGCCATGAC 59 11306913 11306993 CATGTGGACACCTGATTTACG 59 NA Drosophila melanogaster 61 CG15202 FBgn0030271 FBtr0073438 2 1 1 82 X 11036796 11037103 AGTGCATCCAGACTATCCTG 59 11037148 11037166 TGATGGGCTTGTAGGACTG 59 NA Drosophila melanogaster 61 Rab9Db FBgn0030221 FBtr0071507 1 1 1 131 X 10517082 10517100 AATTCACCGAAAGACACCG 58 10516969 10516987 TCAGCAATTTGAAGCGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15311 FBgn0030182 FBtr0071436 2 1 1 145 X 10080639 10080658 GGCCCACATTCAATATGCTC 59 10080760 10082184 GAGATTCAAGTATGATATCAGCTGC 59 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381,FBtr0273354 2 2 2 80 X 9624701 9647044 AGTTAATCCGGATCATCCCAG 59 9647083 9647104 GATTTGTTGGATAGCTTGTTGC 58 NA Drosophila melanogaster 61 CG3106 FBgn0030148 FBtr0071403 1 1 1 103 X 9555448 9556404 CACTGGAATTTCCCGACAC 58 9555363 9555381 GGTAGAGCTAGCTGCTACG 59 NA Drosophila melanogaster 61 Obp8a FBgn0030103 FBtr0071307 2 1 1 208 X 9108942 9108960 CACAGATCGGTTTGCTCAG 58 9109359 9109377 GAGATAGTGACGCACATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12115 FBgn0030097 FBtr0071341 1 1 1 66 X 9084578 9084596 GTGTTGTCATTCGCCTTGG 59 9084119 9084137 CATCCTGTTCAACCACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12662 FBgn0030074 FBtr0071264 1 1 1 60 X 8877858 8877877 TACGTAATGAATCGCATCCA 57 8877817 8877837 GATGGTACATGAACTTCAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32710 FBgn0052710 FBtr0071252 2 1 1 275 X 8713304 8713814 AATTACAACAGCGGAAGCA 58 8714662 8714680 AGCACTTTGTTGCGTAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1387 FBgn0030033 FBtr0071173 3 1 1 93 X 8281594 8281687 GGGTAGATATGAAGAAGACTTAGGT 59 8281737 8281756 ATTAACATCCCAATCGCCTG 58 NA Drosophila melanogaster 61 CG2147 FBgn0030025 FBtr0071166 1 1 1 154 X 8134910 8134983 GTTTCCTGGATCCCTGACTC 59 8135099 8135118 GAACCAGCTGGACACTAGAG 59 NA Drosophila melanogaster 61 CG2120 FBgn0030005 FBtr0300914 3 1 1 60 X 8030079 8030099 CTATTGGAACTTGTGAATGGG 57 8030189 8030207 CTGTTGGCTTATGTTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG2254 FBgn0029994 FBtr0071116 2 1 1 98 X 7973952 7975477 GAAAGTGACGCAAAGTGCT 59 7973872 7973890 TTGACGATCAGCATCACGA 59 NA Drosophila melanogaster 61 CG32718 FBgn0052718 FBtr0300461 2 1 1 81 X 7673085 7673162 ACTTTCAAGCTAACAAGCCC 58 7673206 7673224 GGATTAGCTTCATCGCTGG 58 NA Drosophila melanogaster 61 CG34338 FBgn0085367 FBtr0112540 3 1 1 80 X 7662367 7662387 AATTCGTCAGATATTCTGCCG 58 7662428 7662866 GAAACAACAGAGCATCTCCG 59 NA Drosophila melanogaster 61 CG18155 FBgn0029945 FBtr0071051 2 1 1 103 X 7223263 7223363 TACATAAGGATGGCTTCATCG 57 7223428 7223446 ATCCGGATAGAGCATAGCC 58 NA Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070907 3 1 2 231 X 6246514 6252953 GAAACTGCCAAATGTGGGAG 59 6253147 6253165 GATACCCTCGTCAGCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 1 2 2 116 X 6215018 6215857 ATGTATTCGAGCAGGTCGG 59 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA Drosophila melanogaster 61 CG15464 FBgn0029748 FBtr0299590 1 1 1 60 X 5081417 5081435 CATGGAGGGCATCATACAG 57 5081459 5081477 CCAGATCCCACTTACCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15473 FBgn0029719 FBtr0070689 3 1 1 191 X 4548256 4548448 ATGGCAATCTTGCCTTTGG 59 4548083 4548104 CACGTATGTGACATGCTTAAGG 59 NA Drosophila melanogaster 61 CG3546 FBgn0029716 FBtr0070679 1 1 1 60 X 4452880 4452900 CTATGACGAAGAGGACTACGA 58 4452920 4452940 ATCTCTGTAGTAGCCATTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14423 FBgn0029646 FBtr0070556 1 1 1 60 X 2839754 2839774 TTCCTAACCTTCAAGAACCTG 57 2839794 2839814 TGATAATGATCGGAATCACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2652 FBgn0025838 FBtr0070505 2 1 1 63 X 2576417 2576435 TATTTGCGAGGAGATGCTC 57 2576372 2576390 ATTCTGTCTCATCATGGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3071 FBgn0023527 FBtr0070398 2 1 1 96 X 2156938 2156957 TCCTTTCTTCCACTGAACAC 57 2157016 2157102 GTAGTTCTGGTTTCGCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18031 FBgn0023550 FBtr0070423 2 1 1 80 X 2096032 2096110 CAAGAGAATCTTAAGGATCAAGGTG 59 2095976 2095994 CAAAGCCAGAGGATCAGCT 59 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 2 3 3 83 X 1674790 1674809 CTGAAATAGTCTCCAGGCGT 59 1674855 1675765 ACTGATATGCTGTGGCCTG 59 NA Drosophila melanogaster 61 b6 FBgn0024897 FBtr0070272 1 1 1 88 X 1582538 1582556 AAATCTGGGTCGCAAATGC 59 1582605 1582700 TTTCAACGGGTAGTTCAATCTG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0300428,FBtr0300430,FBtr0070261,FBtr0300427 3 5 9 94 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1541414 1541432 AATGACGCCACTGAGTAGG 59 NA Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070209 3 1 3 80 X 1237240 1237334 AAATGCATGACATCATGCGA 59 1237374 1237395 TGTAGATGAAGTAGCGATACGT 59 NA Drosophila melanogaster 61 Sec22 FBgn0260855 FBtr0070141 1 1 1 84 X 700766 701014 ACCTATTCCACTACCTAATCGAG 59 701058 701076 TAATTGAAGGCCAGTCGCT 59 NA Drosophila melanogaster 61 CG3156 FBgn0023536 FBtr0070079 3 1 1 80 X 383449 383528 TTTGGATTGACTGGCTTCTG 58 383569 383589 CGAGTCTTGTAATACCAAGGT 57 NA Drosophila melanogaster 61 Exp6 FBgn0001337 FBtr0070098 3 1 1 80 X 367845 367864 AGCAATCGTTTGTATAGCGG 58 367726 367804 AACTTGAGCGTATAGGTTGTC 58 NA Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107,FBtr0070108 2 2 2 153 X 139495 139513 TGAATCTCACGGACTTCCA 58 139295 139313 TCTTCCAGTTTGCTTTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CR40573 FBgn0085748 FBtr0114198 3 1 1 60 U 9529623 9529643 AATGGACATAGTCCTGTAAGC 57 9529660 9529683 ACCTATAGTAGTTCTTGAACCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40813 FBgn0085521 FBtr0113934 1 1 1 91 U 3136495 3136513 CAAGCACATGACCTTGACC 59 3136567 3136659 GATGCTTACTTGACTGCGAC 59 NA Nonspecific Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 3 2 2 99 U 1911187 1911209 GTTAAATGGATCGACCGTAATCC 59 1911267 1937081 CCATGAAGCACTTTGGAGTC 59 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 1 3 3 80 4 663048 663129 ACCATTCTTGAGTCAGAGC 57 662986 663004 TGATTGTTCCAGTGTCTGC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-291 FBgn0065064 FBtr0091755 1 1 1 60 3R 7049447 7049465 TATTCCAGTAACGGTGCGG 59 7049487 7049507 TACGTGATATGGTTTAACCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-A425 FBgn0086056 FBtr0114332 1 1 1 66 3R 7048577 7048597 ACGATGGTATCTGAATGAGCA 59 7048625 7048643 ATCAGAAGGAAGGCAGCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31032 FBgn0051032 FBtr0085524 3 1 1 80 3R 25685364 25685439 CGGCCTATAAGGTTTCCTAGG 59 25685304 25685322 GAGCGTTCTACCCTACTCC 59 NA Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085875 3 1 2 107 3R 27892129 27892149 AAACATCTGGTTGAAGACACC 58 27884859 27892060 CTCGTCGTTCTGTAGAGGA 58 NA Drosophila melanogaster 61 Gcn2 FBgn0019990 FBtr0085787 3 1 1 86 3R 27224757 27224833 GACGGTGAAGATGCTTCAG 58 27224882 27224901 GGAACCAGGTCTGAGATGAG 59 NA Drosophila melanogaster 61 Gcn2 FBgn0019990 FBtr0085787 2 1 1 84 3R 27224759 27224835 CGGTGAAGATGCTTCAGTG 58 27224882 27224901 GGAACCAGGTCTGAGATGAG 59 NA Drosophila melanogaster 61 Prosalpha3T FBgn0261395 FBtr0085738 1 1 1 60 3R 26948798 26948818 TATCAGTTCAACTTCGGTGAG 57 26948758 26948776 TATCGCAAAGGTTCGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dj-1beta FBgn0039802 FBtr0085703 3 1 1 137 3R 26633378 26633468 GAATAACTATAGCTATGTGGACGAC 59 26633563 26633581 ACCTCCTGGACTTTCTCCT 59 NA Drosophila melanogaster 61 Rpt6R FBgn0039788 FBtr0085680 2 1 1 117 3R 26409039 26409112 AACTCAACCTCAAGGTTCG 57 26408940 26408958 TGAACCTTCACAAGGACCT 58 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681,FBtr0085683 1 3 3 149 3R 26351985 26352003 GACTTCTACGGTCTGCTCC 59 26345477 26348959 CTTGGCCTCCTTTAACTGC 58 NA Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 2 1 1 81 3R 26247245 26247263 AATGAAGGAGACAGGAGGC 59 26247073 26247203 ATCTTCCTCTGGTATTGGAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sry-delta FBgn0003512 FBtr0085558 3 1 1 60 3R 25870160 25870180 CAAGACCTTCAACCATCACAC 59 25870202 25870220 GGAGCAGTAGTGTCTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 2 2 2 80 3R 25736583 25736672 CAGTCAACAGAAACTCCTCC 58 25736714 25736733 CTTCGGTCCTCTCACTAGTC 59 NA Drosophila melanogaster 61 dgt1 FBgn0039710 FBtr0085527 3 1 1 80 3R 25682289 25682374 TGATCCTTTGAAACACGCTG 59 25682228 25682246 CCCTGAAGCTTGATCAGCT 59 NA Drosophila melanogaster 61 CG1972 FBgn0039691 FBtr0085476 1 1 1 80 3R 25571394 25571491 ACTTCCACCTGGATCACTG 59 25571535 25571553 GATGCGTCATGTAGATGGG 58 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0110908,FBtr0085437 3 4 4 98 3R 25141737 25141756 GCTAGTCCCAAGAAGAACCA 59 25141593 25141678 GTTAGATTCCTCAGTCTGTGC 58 NA Drosophila melanogaster 61 CG11873 FBgn0039633 FBtr0085365 3 1 1 80 3R 24929959 24930041 AAGGCTAATCAGGTATCATTGC 58 24930081 24930100 GCAGTGGACTCAAATTCCTC 59 NA Drosophila melanogaster 61 beta4GalNAcTB FBgn0039625 FBtr0085419 3 1 1 60 3R 24859554 24859572 CTCATCGTGTACCTGTGTC 57 24859512 24859533 ATTCCTCGATGTAGTCGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inx3 FBgn0028373 FBtr0085350 2 1 1 80 3R 24680379 24680466 GTTAGGCGTTTGGAGATTGG 59 24680318 24680339 CATGTCACTGTACGATCTTGTG 59 NA Drosophila melanogaster 61 htt FBgn0027655 FBtr0085310 3 1 1 80 3R 24551396 24551415 AATGGATTAAGGAACGCTGC 59 24551456 24551685 AGTAGATTATGTGCTGATGCG 58 NA Drosophila melanogaster 61 CG17856 FBgn0039576 FBtr0085279 3 1 1 61 3R 24119892 24119911 TTCTCCAAGTTGGGAAAGTG 58 24119935 24119953 CGATACAGGCCGTATTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mes-4 FBgn0039559 FBtr0085267 3 1 1 81 3R 23759032 23759108 ATGATGCAGTTAAGGCCCA 59 23758969 23758989 TTAGGCTTCACATGGATACGA 59 NA Drosophila melanogaster 61 CG17197 FBgn0039367 FBtr0290204 3 1 1 65 3R 21600210 21600228 CCGTTAAGAGTCCTCTGCC 59 21600085 21600182 GTGAATGATGCTGAACACGT 59 NA DesignRelaxed Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084894 2 1 2 169 3R 21434507 21434594 GTTAAGAAAGAATCTGGTACCG 57 21418517 21418535 AGAACACATCGTCCTTCAC 57 NA Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084894 1 1 2 112 3R 21434507 21434594 GTTAAGAAAGAATCTGGTACCG 57 21418574 21418595 CTCCAACAAGTGTTATGAACAG 57 NA Drosophila melanogaster 61 rha FBgn0027376 FBtr0084832 2 1 1 84 3R 21170196 21170277 AGAGTCGAACCCATTGACC 59 21170325 21170343 CATTCTGGCGAAACTGTCC 59 NA Drosophila melanogaster 61 CG13663 FBgn0039291 FBtr0084873 1 1 1 80 3R 21040766 21040786 GGACAAACTACGGAGATTCTG 58 21040644 21040728 TTAGTAGGTACCTGTTGTACCTC 58 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 1 3 3 96 3R 20924348 20924366 CTGTGATACTCCATTCGCC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 CG11786 FBgn0039264 FBtr0113282 1 1 1 81 3R 20872869 20872892 AGGATGATATGATGTCTGGATCTG 59 20872927 20873015 TGGGCTAGTTTATCCTTATCTGTC 59 NA Drosophila melanogaster 61 tnc FBgn0039257 FBtr0084754 2 1 1 80 3R 20835144 20835162 AGAAGTTGCTGATGTTGCA 58 20837633 20838552 AGCATCCCTCCGAATACTG 59 NA Drosophila melanogaster 61 CG33658 FBgn0053658 FBtr0091637 3 1 1 87 3R 20666497 20666515 AAGTCCAATGTAGTCGCCA 59 20666377 20666447 TAATGTCGTGGTTGTACGGA 59 NA Drosophila melanogaster 61 CG6980 FBgn0039228 FBtr0084698 3 1 1 87 3R 20633788 20633867 AGCAGAACTACAGAGAAGTCAG 59 20633909 20633933 GATGATAGCCTTGTCATAATGTAGG 59 NA Drosophila melanogaster 61 Syx18 FBgn0039212 FBtr0084670 2 1 1 72 3R 20450225 20450245 AAAGAACGTGGTAGACATTGC 59 20449854 20449873 GATATTGTGCTGTTGCATGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6643 FBgn0039208 FBtr0084647,FBtr0084648 1 2 2 80 3R 20378684 20378702 AGAAAGACGAGAACCTGGG 59 20380118 20380196 AGGTGAGCCAACTATCCAC 59 NA Drosophila melanogaster 61 CG13599 FBgn0039128 FBtr0084493 2 1 1 86 3R 19757646 19757664 CTCATTACCAACGCAACCA 58 19757714 19757793 AGGCTTGTCGGATGATCTC 59 NA Drosophila melanogaster 61 CG31413 FBgn0051413 FBtr0084442 1 1 1 60 3R 19528518 19528538 CCAAACGATACTTTATCAGCC 57 19528560 19528578 GTCCAGCGGAAAGAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31365 FBgn0051365 FBtr0084406 3 1 1 82 3R 18950904 18950992 CCTATAACATCAAAGAAGACGGC 59 18950844 18950864 CAGATTAAACACGACCACGTC 59 NA Drosophila melanogaster 61 CG33107 FBgn0053107 FBtr0084279 2 1 1 80 3R 18410266 18410285 ATGTCCTTTCTCCGGAAGTC 59 18410149 18410223 ATTCAGCAACTGTTTGCCG 59 NA Drosophila melanogaster 61 CG13855 FBgn0038960 FBtr0084225 1 1 1 80 3R 18232126 18232147 TTCCAACTGGAGATGAATAAGG 58 18232186 18232260 ACGGTGTTTGTCATAGTACAC 58 NA Drosophila melanogaster 61 fit FBgn0038914 FBtr0084153 2 1 1 60 3R 17710118 17710138 GTGATTCTACTTCTTTCGGCT 58 17710078 17710098 CCTCAGACCAACGAATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 burs FBgn0038901 FBtr0084131 3 1 1 101 3R 17595584 17595660 ATATCCAGGTTTCGGGCAG 59 17595725 17595743 TGGGACAGAATAGCGAGAC 58 NA Drosophila melanogaster 61 CG31233 FBgn0051233 FBtr0084127 3 1 1 108 3R 17577291 17577309 CGTTTCGTATGCTAAGGCC 59 17577379 17577459 AGTGAATTGATTGTCGACCAG 58 NA Drosophila melanogaster 61 CG31343 FBgn0051343 FBtr0084126 3 1 1 111 3R 17574330 17574418 AAAGACGAGGCTTAACGCT 59 17574493 17574511 CCAAGCGAAGTTGGATGTG 59 NA Drosophila melanogaster 61 lbe FBgn0011278 FBtr0084091 2 1 1 80 3R 17270855 17270873 TCAAACGGAGACACTCCTC 59 17268109 17270813 CAAGTGGGATTTATCTTGCGA 58 NA Drosophila melanogaster 61 CG16791 FBgn0038881 FBtr0084095 2 1 1 93 3R 17160480 17163407 TGTCGACGAGAAAGGATGTC 59 17160406 17160425 ACTATCACCTTCGCACTCAC 59 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 2 3 3 94 3R 17109863 17109881 TGATGTGCAAGTTTGTGCC 59 17106316 17109805 GATGGCAATGAACCTGTCC 58 NA Drosophila melanogaster 61 ppan FBgn0010770 FBtr0084012 1 1 1 83 3R 16942281 16942299 ATCTTCAACAAGGCCTCCA 59 16942344 16942426 CTGGTGAACCTTGAAAGTCAG 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 2 4 4 127 3R 16450496 16450514 CATCGATAGCGTACCAGCA 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 CG4360 FBgn0038787 FBtr0083899 2 1 2 102 3R 16152108 16152126 TACCAACCACCTCAAGACG 59 16151861 16152043 CATTGAGTGATCCACTGTGG 58 NA Drosophila melanogaster 61 CG10889 FBgn0038769 FBtr0083839 3 1 1 60 3R 15861068 15861086 CAACAACATAGCCGACCAG 58 15861026 15861045 GAACACCAGGTATCTTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7432 FBgn0038727 FBtr0301213 1 1 1 80 3R 15496158 15496176 TTCCCACTGGGTTCAACTG 59 15496218 15496299 ACTCGAGTATAGACACCTGGA 59 NA Drosophila melanogaster 61 CG11626 FBgn0038705 FBtr0113247 1 1 1 100 3R 15235926 15235997 GTTCAGAAACTCGTGCCTG 59 15236061 15236079 CTGATTGGCAAAGGCTTGG 59 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 1 3 3 80 3R 15070461 15070480 CTCTTCTACTACTGGCCAGC 59 15070340 15070422 CACTAGGTCATTGGTTAGTTTGG 59 NA Drosophila melanogaster 61 nos FBgn0002962 FBtr0083732 1 1 1 80 3R 14984694 14984785 GCAAGGCCAAAGAGATCAG 58 14984827 14984847 CTGAGTGGCTATTGATAACCG 58 NA Drosophila melanogaster 61 VAChT FBgn0015323 FBtr0083671 3 1 1 62 3R 14531775 14531793 ATCTCCGAGGATTCCTCAC 58 14531819 14538155 GTGAACAACCTGTATCGCT 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7998 FBgn0038587 FBtr0083563 2 1 1 147 3R 14053486 14053504 GATCTGTTCAACGTGAACG 57 14053615 14053691 AAACACCAGCCTTCTTGAG 58 NA Drosophila melanogaster 61 CG7993 FBgn0038585 FBtr0083562 3 1 1 81 3R 14049772 14049791 CTGGTTAAAGTGCTGAACCG 59 14049832 14049921 CGTTCTTCATGGTCAAGAACTC 59 NA Drosophila melanogaster 61 CG34281 FBgn0085310 FBtr0112477 3 1 1 60 3R 13438897 13438915 TACGGAGGATTTGGTGGAG 58 13438936 13438957 TGCTAAACTGGTTGTATTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5873 FBgn0038511 FBtr0083442 3 1 1 81 3R 13267089 13269471 AATTGGCCCGAACATATGG 58 13269516 13269534 CGAATCAGCGTCTTTGAGG 59 NA Drosophila melanogaster 61 CG14333 FBgn0038500 FBtr0083434 1 1 1 108 3R 13210395 13210413 CATTTCAGCAGCCATCTGG 59 13210485 13210503 TGTTGATCAGCTCGGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 3 1 1 220 3R 12978013 12978031 GAACGATCGTTTCGGAGGA 59 12978215 12978289 TGACTCCATTCATGCTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5220 FBgn0038471 FBtr0083391 1 1 1 83 3R 12866682 12866755 TCTAAATGGTGTTCAGCGG 57 12866800 12866820 GTATCGTAGAGTTTCCGAGAG 57 NA Drosophila melanogaster 61 CG14909 FBgn0038458 FBtr0083366 1 1 1 60 3R 12801007 12801025 TGGTGTCCTACCGATACGA 59 12801049 12801067 ACAGCCGTTAGGATCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 npf FBgn0027109 FBtr0083328 3 1 1 82 3R 12436705 12436726 ATGGATATCCTGAGGAATCACG 59 12436769 12436840 AAACCGCGAGCAAATTCTC 59 NA Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083325,FBtr0083326 2 2 2 73 3R 12174544 12174562 TACCTCGGATCGAGTAACC 58 12173237 12174507 AGTTCACCGAGAATTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083265,FBtr0083261,FBtr0301304,FBtr0100333,FBtr0083263 1 9 9 80 3R 12122762 12122781 AGGCTGATACACTCAAGGAG 58 12122824 12122912 GTCCATCACAAAGCACCTC 58 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 2 1 1 134 3R 11849432 11849778 CGAATCAGACCTGGTCTGG 59 11849876 11849894 GATAGCCACAGCCATAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 CG18516 FBgn0038350 FBtr0083150 2 1 1 80 3R 11377457 11377481 CAATCAGGATTTGAGTATCTTGAGG 59 11377352 11377420 AGTGCCAGAATTTCGAACAG 58 NA Drosophila melanogaster 61 CG6045 FBgn0038349 FBtr0083151 3 1 1 80 3R 11371302 11371378 TGAGTCCTATAAGATCATGCCT 58 11371243 11371262 TCGGCTTCCAATTCTAGGAG 59 NA Drosophila melanogaster 61 CG18522 FBgn0038347 FBtr0083154 3 1 1 82 3R 11361061 11361080 TGGAGGGAAAGATTATCCGT 58 11360776 11361018 GGGCATAATCTTGTAGGAGTC 58 NA Drosophila melanogaster 61 CG14871 FBgn0038343 FBtr0300174 3 1 1 158 3R 11311035 11311055 ACTAAGACAACGATGCATTGG 59 11310781 11310853 GTTAAAGCAGCATGTGCGA 59 NA Drosophila melanogaster 61 CG6196 FBgn0038323 FBtr0083116 1 1 1 134 3R 11176497 11176585 GATAGCAATAAGGAGCACGAC 59 11176383 11176407 GGTGCATATAAACTTCATAGTCTCC 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 3 2 3 85 3R 11085400 11088278 ATCAAGCTGGGTTATGCCA 59 11085333 11085351 GATGCATCCGATACGAAGC 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083059 3 1 6 136 3R 11069009 11070095 CGTAATTGATGTCTAAAGCTCC 57 11070192 11070210 GGCAACATAGGATGGAGTG 58 NA InUTR Drosophila melanogaster 61 tefu FBgn0045035 FBtr0110874 3 1 1 80 3R 11059360 11059378 CTCAACGCTGTACATTGCC 59 11059236 11059322 CCACTTGACGACACTTATTATACTG 59 NA Drosophila melanogaster 61 RpL10Aa FBgn0038281 FBtr0083024 1 1 1 60 3R 10863255 10863274 GCTGAGGGATTATGATCCTG 57 10863294 10863315 GTGATGCAATAGTACACTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33967 FBgn0053967 FBtr0100008 3 1 1 80 3R 10525059 10525139 GATTTGGTGTCGTTCAAGGAG 59 10524999 10525019 GGTAAATTCACTGGGCAACTC 59 NA Drosophila melanogaster 61 Rad17 FBgn0025808 FBtr0082974 2 1 1 80 3R 10488027 10488134 AGTTACTAGAAGAGTACACGGC 59 10487968 10487989 TATTCAATCCTCGAGATTTGGC 58 NA Drosophila melanogaster 61 CG8087 FBgn0038241 FBtr0082983 1 1 1 73 3R 10390386 10390404 GATGCATTGACTGCACCAC 59 10390331 10390349 TGTACTGGTTGTATCGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpII15 FBgn0004855 FBtr0082925 1 1 1 118 3R 10134842 10134915 AAGCCAATAGCCATGACGA 59 10134997 10135015 TTCTCCTTGTCCTCCTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14840 FBgn0038217 FBtr0082952 1 1 1 60 3R 10086212 10086230 CGGGTGGAGAATCTAACCC 59 10086170 10086188 GCTTGGTCTTCTCGAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9649 FBgn0038211 FBtr0082902 2 1 1 84 3R 10041783 10041801 CCACGAACAGTACAATCCC 58 10041650 10041737 GTAATCGCCAATATCAACGTG 57 NA Drosophila melanogaster 61 CG9920 FBgn0038200 FBtr0082917 1 1 1 95 3R 9923773 9923792 GGAACAACATCGTTCTTCCA 58 9923623 9923718 GACATCGTTTCTTGTTTGTGAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14358 FBgn0038199 FBtr0113232 2 1 1 81 3R 9918999 9919019 GAATACGGACATTCGTGTTGG 59 9918750 9918867 GCAAGGGATGCTGTTTAGC 59 NA Drosophila melanogaster 61 ems FBgn0000576 FBtr0082863 2 1 1 163 3R 9729026 9729334 TTCCCTGGAAGTTTCCTGG 59 9729461 9729479 GTCTCGGACAGATTGAGGT 58 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 2 5 5 82 3R 8845522 8845623 GAAATACACGAGAAGGTCCTC 58 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 3 2 2 124 3R 8529518 8529600 CAAGATATCCGGTGCAACTG 59 8529687 8529705 CGAACTCGTCAGAGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp313a4 FBgn0038076 FBtr0082667 3 1 1 80 3R 8506926 8506945 TAACGCTAAAGATACCGGGA 58 8506800 8506883 TGAGGATATCTTCCCTGCG 58 NA Drosophila melanogaster 61 CG12267 FBgn0038057 FBtr0082635 3 1 1 80 3R 8287659 8287738 TCAAGGAGAAAGATACCGTGAG 59 8287775 8287797 CGAAGTTAGATCGCTCTATTGTG 59 NA Drosophila melanogaster 61 CG5509 FBgn0038054 FBtr0082633 1 1 1 60 3R 8278546 8278564 GGTCAGAAACTGAGTGACC 57 8278585 8278606 CGTACGGACTAAAGTTAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4848 FBgn0037998 FBtr0082624 3 1 1 77 3R 8043362 8043380 AAGAGAAACTGCCAAAGGT 57 8043244 8043262 GTTCCAGTGTCAAGGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14741 FBgn0037989 FBtr0300351 2 1 1 80 3R 7897154 7897173 ATACAGGATTCGCTCTGGTG 59 7897031 7897113 TGTCCAGGAATTTGTTCTCCA 59 NA Drosophila melanogaster 61 Spt3 FBgn0037981 FBtr0082537 1 1 1 60 3R 7843132 7843150 GAAGCATACCGACGAATCC 58 7843174 7843192 CCGGCTACATTATGTCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scpr-C FBgn0037879 FBtr0082351 1 1 1 101 3R 7051339 7051357 CTGGACAAGCACATAGCCT 59 7051475 7051493 GAGGATGAGTTTGTGGTGC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4570 FBgn0037844 FBtr0082287 2 1 1 60 3R 6682982 6683000 GGAGAACCGGCAAATTGTC 59 6683024 6683042 ATCGATGGAGGTGTAGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300079,FBtr0300078 1 2 3 80 3R 6640541 6640562 CGTCATGAAGAATTTATCTGCC 58 6640423 6640503 CGAATCAAAGATTTATCCGCTG 58 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 3 2 2 80 3R 6565219 6566919 GACCAAGCACTATTACAATGG 57 6565159 6565178 GCCATAGAAGTGGGATATCG 57 NA Drosophila melanogaster 61 CG6325 FBgn0037814 FBtr0082260 3 1 1 80 3R 6230153 6230173 CAAAGAAGCTAAGAAGACGCT 58 6230029 6230111 GTGATATGCAGTCGTCCTC 57 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198,FBtr0082196,FBtr0301386,FBtr0082197 3 6 6 116 3R 5930689 5930707 AGAACATACCACGTGAGCT 58 5930509 5930610 GTTCTACTTCCTTCAGGTGC 58 NA Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105,FBtr0100537 2 2 2 60 3R 5416000 5416018 CCTTCGACATACAGACCCA 58 5415958 5415976 AGTTGGTTTGAGTCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16789 FBgn0037712 FBtr0082071 2 1 1 80 3R 5393211 5393230 GACGAGGAAGTTAGCTTCCA 59 5393268 5393345 GGTATCGTTAAACAGATCGATCTC 59 NA Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082068 3 1 2 103 3R 5385742 5386651 TTTCTACTACAGCCGAGCC 59 5386718 5386736 TATGGTTGCGAATCACCGT 59 NA Drosophila melanogaster 61 by FBgn0000244 FBtr0302382 3 1 3 122 3R 5354672 5354990 CATAATTCCAGGCACTGGA 57 5354568 5354589 GCAGTTAAGCTCATTATATCGC 57 NA InUTR Drosophila melanogaster 61 CG16779 FBgn0037698 FBtr0082125 3 1 1 108 3R 5297771 5297789 GAAGAAGGACTCCAGTGGT 58 5297615 5297702 AAAGGAGCCCTTAGTCATATCC 59 NA Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 3 2 4 110 3R 5180479 5180498 TGGAACGTGAATCTAACCCA 59 5180568 5180659 TTCTAAGCGAGTCCTTATAGCA 58 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 1 3 3 81 3R 5161906 5161925 CTGTTCTCGCTTATCATGGC 59 5161969 5162217 TCCTCTCGTATTCCTTGCG 59 NA Drosophila melanogaster 61 CG16749 FBgn0037678 FBtr0082057 2 1 1 111 3R 5157553 5157571 GTATTCGCCCTCTTGACCA 59 5157395 5157478 GCATCGAAATCACGAAGGG 59 NA Drosophila melanogaster 61 CG11985 FBgn0040534 FBtr0082006 1 1 1 60 3R 4840964 4840983 GGTGAACGCTACAATATCCA 57 4840923 4840941 CTGTTCCGATGTACTTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11964 FBgn0037644 FBtr0082015 2 1 1 91 3R 4768857 4768938 GCATAATGAGGGAATACGCTG 59 4768786 4768810 ACGATCGACTAGAGATAATATGTGG 59 NA Drosophila melanogaster 61 Coq2 FBgn0037574 FBtr0081858 2 1 1 156 3R 4141076 4141152 GTGCAGCAGATCTATTCCC 58 4140938 4140956 TTAGTGAGGATTGTCGCTG 57 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 2 1 1 119 3R 4116155 4116235 TTTGCTGACTTTGGCAGAC 59 4116054 4116072 ACACTTACGGCAATCTCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091720 3 1 2 82 3R 4069856 4069929 CTATAGAGGGAAGTGGCCA 57 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Sfp84E FBgn0259974 FBtr0300322 3 1 1 89 3R 3805950 3806020 TTAAGATGCGTCACTTTACCG 58 3805881 3805899 TCTTGAGAGCTGTCCTGTG 59 NA InUTR Drosophila melanogaster 61 lds FBgn0002542 FBtr0081758 3 1 1 94 3R 3747548 3747867 ATCGCTAAAGGACCTCCAC 59 3747922 3747943 GGTTCATAAGCGATACCTTCAG 59 NA Drosophila melanogaster 61 CG2993 FBgn0037521 FBtr0081771 2 1 1 80 3R 3634813 3634831 TGTCTACTATGCCGGACAG 58 3634039 3634769 ACGTGGATGCCTTTAATGC 58 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 3 2 2 97 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322509 3322528 GACTGTAACATTCCCGTGAG 58 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 1 3 4 168 3R 3100072 3100726 GAGGATATTGCCTCGACCC 59 3099922 3099940 AGCTGATGGCATCGTAGAG 59 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081619 3 1 3 60 3R 2589229 2589566 AAACAGAAATACCAGACATGGC 59 2589585 2589605 GCAAGGCAGAATATAAGACCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 3 4 5 84 3R 2582675 2583205 CGACGCTACAGATCTTGGA 59 2582609 2582628 CTTATTCCGGTGCTCATGTC 58 NA Drosophila melanogaster 61 Ccp84Ad FBgn0004780 FBtr0081690 1 1 1 192 3R 2518524 2518603 CATTCAAGTTCATCGCCCT 58 2518759 2518777 TAGGCGTACTTGTACTGGG 58 NA Nonspecific Drosophila melanogaster 61 CG2336 FBgn0037455 FBtr0089748 1 1 1 163 3R 2406642 2406728 ATGTACAACAACCGACCCA 59 2406913 2406935 GTCTCAATTTCTAGGATCAACGG 59 NA Drosophila melanogaster 61 Hr83 FBgn0037436 FBtr0081713 1 1 1 60 3R 2175563 2175581 TGGAGTCCCTAATCCTGTG 58 2176038 2176056 AGGATAACGGCATACTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Osi15 FBgn0037424 FBtr0078607 2 1 1 99 3R 2127882 2127900 TAAACCTCTCCTTCTCCGG 58 2128523 2128541 ATCTTCTTCATGCGCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Osi5 FBgn0037413 FBtr0078595 1 1 1 80 3R 2053733 2054176 GTCCCAAGTTTCAGAAGCC 58 2054217 2054238 ATCATCTTGCCAAACATCAGAG 59 NA Drosophila melanogaster 61 Osi2 FBgn0037410 FBtr0078592,FBtr0078593 1 2 2 93 3R 2037880 2037899 CATTCGAGTACTCCGAGGAG 59 2037955 2038122 GACTTGATGAAGCGTTCGG 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078755,FBtr0078757 2 4 4 87 3R 1385033 1385111 TTCCTCTAAAGACTGGCTCC 58 1384965 1384983 AAGGGTTCGCTTTCAAAGC 59 NA Drosophila melanogaster 61 Snm1 FBgn0037338 FBtr0078688 2 1 1 80 3R 1382370 1382388 TGCTAACAGAAGATCGCAG 57 1382432 1382507 AGTAATCGACTAGGCTCGG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 3 14 19 103 3R 1121939 1121963 CTACTATCCCAAACCAGTATTAGTC 58 1121677 1121880 CTATTTCTGCATCTAAGCGCT 58 NA Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 1 2 2 81 3R 468366 468479 CCAACTATCTAAACTTCCTTGC 57 468519 468539 CAGTACTGCAGATACTTCAGG 58 NA Drosophila melanogaster 61 CG32945 FBgn0052945 FBtr0078896 2 1 1 60 3R 404092 404114 CATAATGTGAGTGCCTTACATCC 59 404054 404072 CCAAAGAACGCTTCTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31525 FBgn0051525 FBtr0078924 3 1 1 60 3R 253547 253567 TTCTGAGCTAGCTAGAAATCC 57 253589 253607 AAAGAAGCCTGTTATGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34112 FBgn0086608 FBtr0110805 1 1 1 123 3R 219646 219664 CTTCTCCATCTCCCGATCC 59 219482 219561 ATATGGGCTCTTCTCGAAGTC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-3327a FBgn0082967 FBtr0113611 2 1 1 87 3L 13035888 13035906 TTGCGTGTAGAATAGTGCG 58 13035955 13035975 AACTGGGATTTGTCGAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr015:3L FBgn0063083 FBtr0091959 3 1 1 77 3L 7399505 7399524 TTCCGTCAGTTAATCGAGCA 59 7399564 7399582 TTTCCAGGGTTCGTGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 2 1 1 71 3L 22641078 22641149 GTTGTCATAAAGCAGAGCG 57 22641181 22641202 GAAAGTCGATCTGTTGTATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7130 FBgn0037151 FBtr0078484 1 1 1 60 3L 22068705 22068726 GGATTACTACAAGATTCTGGGC 58 22068666 22068684 TCCCTTCTTGACGTCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 2 2 2 80 3L 22062292 22062491 AATTGCTTTGTGTTAGGCGA 58 22062231 22062250 TTGATCCAGGATTCCATTGC 58 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 3 2 2 145 3L 22056137 22056786 CAAAGGTTGCATACAGGTCTG 59 22056891 22056911 CCTCAATGAACTGGTTAACCC 59 NA Drosophila melanogaster 61 CG14568 FBgn0037124 FBtr0078455 1 1 1 69 3L 21726526 21726544 CAAGTTCATCTGCTCCCTG 58 21726475 21726493 GAATCTGGTAGGCTCTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089798 3 1 3 111 3L 21522141 21522165 GGATAAATACATTGAGTTCGAGGAG 59 21521997 21522075 CTTCCAGTAGAGCTTAAAGTCG 58 NA Drosophila melanogaster 61 CG32436 FBgn0052436 FBtr0078343 2 1 1 80 3L 21346043 21346061 GGAGAAAGAGCGCATACAG 58 21346102 21346218 CTGTACTCGGGTTTAATTCCAG 58 NA Drosophila melanogaster 61 CG9391 FBgn0037063 FBtr0078417 3 1 1 116 3L 21260333 21260351 CCAGTGAATTCGGTACCAC 58 21260174 21260192 TATTGAGAGCTGCCGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 2 5 5 111 3L 21192061 21192083 GGATGGTAGACATATCTACAACC 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 CG13250 FBgn0037013 FBtr0078211 1 1 1 87 3L 20527557 20527575 AAAGCCGAATCCTGAATGC 58 20527626 20528287 TAGTTGACATTCGCCAGGA 58 NA Drosophila melanogaster 61 CG5872 FBgn0036991 FBtr0078194 1 1 1 80 3L 20430147 20430167 AGAGGAGAGTCCCAATTTGAG 59 20430208 20430368 CTCGTGTTGTCTGTTCTCTG 58 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 2 5 5 145 3L 20381816 20381834 GTCTACTTCGAGCCCAAGG 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 in FBgn0001259 FBtr0078183 1 1 1 60 3L 20361841 20361860 CTGTACTACGATGGCTTCCT 59 20361882 20361901 CTACACTCACCCTCACTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0078179,FBtr0273280 2 2 2 84 3L 20349366 20349448 AGTCGACTTTACACTGTGG 57 20349495 20349514 CTTTAAGAGGCGAGTAACCA 57 NA Drosophila melanogaster 61 CG32226 FBgn0052226 FBtr0074846 3 1 1 85 3L 20291360 20291378 AAGCGATGTCGTCTTAGCA 59 20291235 20291311 TCATCCAATACCTGCAGGG 59 NA Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 3 2 2 93 3L 20181853 20182103 CCTGAAGCTGATCATCAATCTG 59 20182157 20182175 GTTTAAGTTCCACGTGCCG 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 3 6 6 92 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853564 19853582 CTCATCCTTCCTCTTGGGC 59 NA Drosophila melanogaster 61 CG9300 FBgn0036886 FBtr0074938 1 1 1 83 3L 19546274 19546292 TTAAGCGGGAAGAGGTTCG 59 19546337 19546437 TATCAGACCAAATGGTCAGCA 59 NA Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 2 2 2 80 3L 17885509 17885527 TGACGACCAACTTCATCAG 57 17885373 17885467 TGCCAAAGATCATCAGTATGG 58 NA Drosophila melanogaster 61 CG6259 FBgn0036740 FBtr0075201 2 1 1 97 3L 17613586 17613605 GATGACACCAGCTATTTGGA 57 17613447 17613526 TCAATGGTGCTCTTTCCAG 57 NA Drosophila melanogaster 61 CG34250 FBgn0085279 FBtr0112444 3 1 1 62 3L 17469521 17469539 TTTCTTCGTGGTCATGCTG 58 17469565 17469583 GGATCCATCTACGTGACAG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG34250 FBgn0085279 FBtr0112444 1 1 1 60 3L 17469400 17469421 TTAGTGCATTAATGGACTGCTG 59 17469440 17469460 AGCATGTTGTGGATACTTTCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 1 3 3 131 3L 17468581 17468599 TCGTCACCTACAAGCTGTC 59 17468694 17468768 GGTATCCCACGATGAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG16793 FBgn0036712 FBtr0075242 2 1 1 80 3L 17335848 17335948 TGCATGTGGTACTCAATGG 57 17335786 17335806 CAAGATCCCTAGAATACGACC 57 NA Drosophila melanogaster 61 CG6497 FBgn0036704 FBtr0075250 3 1 1 60 3L 17246856 17246874 CGAACTACCCGTACATAGC 57 17246814 17246832 TGCAAGTAGGCTGTTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585,FBtr0089586 2 2 2 80 3L 17039303 17039322 TAGGCTGATCAGACAGATCC 58 17039364 17039455 TGTAAGATCTTCATCGACGC 57 NA InUTR Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585 2 1 2 128 3L 17039665 17040453 AGGTCGATGAGGACAAGTC 58 17040545 17040563 TATCGTACAAACGGAACGC 58 NA Drosophila melanogaster 61 Dbp73D FBgn0004556 FBtr0075347 1 1 1 103 3L 16723747 16723822 ACTGTTAACAGATATACCGAGG 57 16723665 16723683 TTTGCAGCCTTCTTAAGCA 58 NA Drosophila melanogaster 61 CG13033 FBgn0036638 FBtr0075400 2 1 1 193 3L 16538387 16538641 CAAAGATGCAAGGATTCAAGG 57 16538214 16538232 AAGGACATGGTTCAGGGTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13036 FBgn0036626 FBtr0075416 3 1 1 179 3L 16384711 16384781 ATGTGCTCAATTCTCCAGC 58 16384426 16384445 TAATCGAATGCTCTGCTTGG 58 NA InUTR Drosophila melanogaster 61 CG13069 FBgn0040798 FBtr0075463 3 1 1 123 3L 16258652 16258670 TTACAGCCGGGAATACCAC 59 16258757 16258775 AGATGCCACATACGGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 1 2 2 80 3L 15921311 15921397 GTCAAACCTCCAACTTCTATGC 59 15921252 15921273 GATCGCGATAAACAATTTGCAG 59 NA Drosophila melanogaster 61 CG12486 FBgn0036541 FBtr0075533 2 1 1 60 3L 15849168 15849187 ACCCACTGAGCATATCTACG 59 15849127 15849145 TTTCGTACTTGTGACACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18081 FBgn0036537 FBtr0075537 2 1 1 60 3L 15827542 15827842 GTTTGCAAGTCGCAAATGC 59 15827500 15827519 GATGCTTGTTCTCGAAATGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 3 2 2 86 3L 15673901 15673979 AATCAAGGAACCTGAAACGC 59 15674027 15674046 TATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 3 2 3 81 3L 15580157 15580176 AATGAGCCGAACACATTCTC 58 15579691 15580113 TGTCCTTACCCTGTGAGTC 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333 3 1 4 175 3L 15487695 15487713 TATGCCGTGATGGGTACTG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333 1 1 4 165 3L 15487684 15487703 TGGGTACTGCAGTATATGCC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 ran-like FBgn0036497 FBtr0075616 3 1 1 60 3L 15478121 15478139 ACTTGGTGAGAGTATGCGG 59 15478079 15478098 ATGATATCCACCTTGTTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Best3 FBgn0036492 FBtr0075618 3 1 1 81 3L 15294930 15295000 GTCTATACACAGGTCGTCAC 57 15294868 15294886 TATCCCGATCGATCCACTG 58 NA Drosophila melanogaster 61 CG6859 FBgn0036484 FBtr0075640 1 1 1 219 3L 15137559 15137577 TAGATCCGATCCAAAGGCC 59 15137893 15137911 TGACAAGAAGTCCTGCAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12310 FBgn0036467 FBtr0075665 3 1 1 60 3L 15043731 15043750 ATTCGACTAGCAATGATGCG 58 15043690 15043709 TCATCAGAAGATTCCTCCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 2 3 3 80 3L 14620526 14620544 GCTATGTGACCTTTGGAGC 58 14620588 14620666 GCCATGGAGTCAAATCACC 58 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 2 2 2 80 3L 13437168 13437316 GAGTAGGAAAGTTGTAGAGACGA 59 13437355 13437374 GAATTGACTACGCCTTCACC 59 NA Drosophila melanogaster 61 mRpL20 FBgn0036335 FBtr0075897 1 1 1 93 3L 13010841 13010859 GTCTTCCTGAACCTTCCCT 58 13010703 13010784 TTCTATAATGCGCTGCCAG 58 NA Nonspecific Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075902 2 1 2 164 3L 12957993 12958013 TGTCGGTATCCATGATATCCA 58 12957714 12957867 GCAATACTTTGCCACTCGT 58 NA Drosophila melanogaster 61 CG10660 FBgn0036288 FBtr0075976 1 1 1 81 3L 12481307 12481663 GAAATATAGGTTCCGTCACCTG 58 12481247 12481265 TCTTCCGTGGAATAGCACC 59 NA Drosophila melanogaster 61 CG33725 FBgn0053725 FBtr0113471 3 1 1 126 3L 12475746 12478921 AATTCCTACAGGATGCCGT 58 12479008 12479029 AAGTTGAGTAAGACCTTCTCAC 57 NA Drosophila melanogaster 61 yps FBgn0022959 FBtr0076027 1 1 1 60 3L 12115967 12115986 CAACTTCAACAATGGTCCAC 57 12115863 12115946 CTGGCCTTGAATGTATTCTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 3 1 1 170 3L 11822660 11822734 GCTCGACCTAGAAATGCTG 58 11822867 11822886 TTAAGATCCGAGTCCACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14141 FBgn0036146 FBtr0076164 1 1 1 81 3L 11194699 11194717 AATATCGCGATCCGGAGTC 59 11194815 11194833 TCAAGATCGAAGTGCGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 APP-BP1 FBgn0261112 FBtr0076208 1 1 1 111 3L 11093076 11093094 AAGTGTGCGTCTCATTTGC 59 11093169 11093249 GTTGTCCTCAACCAGTGGT 59 NA Drosophila melanogaster 61 CG34239 FBgn0085268 FBtr0112433 2 1 1 82 3L 11033834 11034040 GAATCCGCTGAAAGTGACG 59 11033770 11033788 TGAGGTCTTCCAAGGTCAG 58 NA Drosophila melanogaster 61 CG32081 FBgn0052081 FBtr0076198 1 1 1 80 3L 11021746 11021764 TCTAATGGGATACTGGCGT 57 11021808 11021885 TGCGAAAGTACTTCGTCTG 57 NA Drosophila melanogaster 61 klu FBgn0013469 FBtr0076247 3 1 1 202 3L 10978169 10989343 CCGTCTAAATCAAAGAGTCCC 58 10977987 10978005 TTCTGCCATCGTCATGAGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282,FBtr0076281 1 2 2 60 3L 10407602 10407620 TCCTCCTTTGCCATGTGAG 59 10407639 10407662 GTCTCTTCTTTAAATTCCCACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 3 3 3 102 3L 10143593 10144086 ATCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 CG10809 FBgn0036052 FBtr0076366,FBtr0300688 1 2 2 296 3L 9851661 9851680 CTCATCTTACGCTACATGGT 57 9851110 9851128 GTCACAATGCCAACTCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 3 2 2 99 3L 9723644 9723662 CGAGTACTACAGCGGTCTG 59 9723724 9723835 TTTATCGATCTCGCCATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5804 FBgn0035926 FBtr0076591 2 1 1 89 3L 8781533 8781616 ATATGGCCGATTTCAACGC 59 8781462 8781480 ACAGGCCATAGAACTCCAG 58 NA InUTR Drosophila melanogaster 61 CG6638 FBgn0035911 FBtr0076651 3 1 1 119 3L 8568973 8568991 GATGTTCGGTCTGGATGAG 57 8568816 8568892 CGCATGTCCTTGAAATTATCC 57 NA Drosophila melanogaster 61 CG6765 FBgn0035903 FBtr0076621 2 1 1 126 3L 8510052 8510070 CACGGAGAGGAATCTCCTG 59 8510160 8510311 GTTCTCCTGTTGCGAAACG 59 NA Drosophila melanogaster 61 Gr66a FBgn0035870 FBtr0300280 2 1 1 132 3L 8299940 8299958 GGAGAAATCCCGTAATGGC 58 8299765 8299844 GAAAGTCAAGGTGCTCTGC 59 NA Drosophila melanogaster 61 CG13674 FBgn0035858 FBtr0076719 2 1 1 254 3L 8211935 8212018 CATGAAATTCCTCGCCGTC 59 8211699 8211717 ACTGGAGCGGTATAAGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767,FBtr0076766 1 2 2 162 3L 7966880 7966898 TCAGGAACATTCTGGAGCA 58 7966670 7966754 CGCTTAATCTGTTCCTGCA 58 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 3 1 1 131 3L 7888728 7888799 AAATCTCGGTTTGGACTGC 58 7888894 7888912 ATTTGGACATTGCATCGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG33276 FBgn0053276 FBtr0114530 2 1 1 83 3L 7633160 7633239 TCAAGGAGATACTGTGCGAC 59 7633040 7633058 AGCTCGTAGTCCAGTTCAC 59 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 2 3 3 87 3L 7558076 7558156 TAGCTGCCTCGATATCGAC 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 CG15829 FBgn0035743 FBtr0076913 2 1 1 90 3L 7122048 7122140 CAACATGCCCACCTTTGAG 59 7122194 7122212 GTAGCCGTAGAACTCGAGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Or65c FBgn0041623 FBtr0077006 3 1 1 83 3L 6321995 6322015 CCAGGAGCCTCTGATTATGAG 59 6322055 6322135 CCATAGCATTGGTTAAGTATAGCG 59 NA Drosophila melanogaster 61 CG13711 FBgn0035572 FBtr0073347 1 1 1 60 3L 4758143 4758163 GTGGGATATCACCTGTATCTG 57 4758182 4758203 TCATGTACTCCACATTCTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13713 FBgn0042199 FBtr0073346 2 1 1 82 3L 4697807 4697825 CATATCCAATACGGTGCGC 59 4697871 4697889 TCCGCTTGAACAGTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0073272,FBtr0302304,FBtr0073271,FBtr0300877,FBtr0073273 1 6 6 80 3L 4098067 4098086 TTCCGAGTCTCAGGAATCTC 58 4097785 4098029 GTAATACGATCGAACGATAGTTGG 59 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 3 3 3 80 3L 4082635 4084744 AACTGACGGCATATGATCTC 57 4082574 4082593 CATCGATTACCTTCAGCAGG 58 NA Drosophila melanogaster 61 Gr64c FBgn0045477 FBtr0073196 3 1 1 82 3L 4031427 4031504 ATAGCTTTCAATCCAAGGGC 58 4031547 4031567 GTTTAGTACGCGAATGATGAC 57 NA Drosophila melanogaster 61 CG14982 FBgn0035477 FBtr0073163 1 1 1 82 3L 3944547 3944565 ACTATCGACCCATTAGCCC 58 3944605 3944807 CTGGTAGTTGTATCTATATCGATCG 58 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156,FBtr0073155 1 2 2 130 3L 3860363 3860381 GTATGGTTCCAGAACTCGC 58 3860751 3860899 TAGAGGATTCATGAGTCGGG 58 NA InUTR Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 2 3 3 80 3L 3120509 3120530 GGCTCATTATTGGATGGTTCTC 59 3120392 3120468 TAGCAAACGGCAATGAACG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 1 4 4 62 3L 3053680 3053698 TTTGTACGATCCGTTCACG 58 3053723 3053799 GAATTGATGCCGAATAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 yellow-g2 FBgn0035328 FBtr0072883 3 1 1 129 3L 2277437 2277513 TGGACGCATCTTGGATCTC 59 2277606 2277624 GAATGTGGAGTTCGTGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 2 2 2 195 3L 1624585 1624678 TTGTAATAGGCATGTTTCCCTG 58 1624411 1624429 AGTTGCAGTCCACAGTAGG 59 NA Drosophila melanogaster 61 CG13926 FBgn0035243 FBtr0072823 1 1 1 142 3L 1617770 1617788 CAGCCAGGAGATCTCACAC 59 1617561 1617582 CGTAGTTGAAGAAGTTCTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12104 FBgn0035238 FBtr0072825 3 1 1 112 3L 1602544 1602562 TTCCACACTCCCTCATTCG 59 1601899 1601918 AACATGGATTGATCCAGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9192 FBgn0035193 FBtr0072734 3 1 1 60 3L 1237825 1237843 AATCATAGGGAGACCGCAG 59 1237783 1237801 AGAGAATCCACCATAGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33965 FBgn0053965 FBtr0100006 1 1 1 80 3L 1233638 1233711 ATCAAGGAGAGGGTTTCCG 59 1233752 1233773 GTACTCCTCAGGAAGATAGTGC 60 NA Drosophila melanogaster 61 CG32335 FBgn0063667 FBtr0273416 2 1 1 67 3L 1202915 1202933 CTCTTTGAGGAGAGGCCAC 59 1202782 1202884 AGAGCACCCTGTATGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13912 FBgn0035186 FBtr0072625 2 1 1 130 3L 1189810 1189895 GTCACATACTGTGAGGGTC 57 1189989 1190007 GATCGTATTCCGGCTTGAG 58 NA Drosophila melanogaster 61 nerfin-1 FBgn0028999 FBtr0072592 1 1 1 60 3L 909454 909472 CGCAGTCGATATCTGAACC 58 909496 909514 GCTTCAGCGTTAGATCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0072602,FBtr0290220 1 2 2 60 3L 711019 711039 TCCATGATAATTTCAGGGCCA 59 710979 710997 GGATATTGAATGGCGTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 1 3 3 113 3L 679818 679905 GAATTTAGCGACCTGGCAG 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 Cypl FBgn0035141 FBtr0072564 2 1 1 82 3L 542819 542837 GATCCCAACAATGCTGGTG 59 542663 542773 GTGATTTCTCCCATGCTCG 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565,FBtr0110818 1 3 4 80 3L 444372 444614 CGAACAACAAGCAGAACTC 57 444310 444331 TATTTCTCTTGGTAGTTGTCCC 57 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 1 5 5 83 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241427 241445 TAATTTGTGGCTCGGTTGG 58 NA Drosophila melanogaster 61 CG13877 FBgn0035112 FBtr0300710 3 1 1 80 3L 218188 218291 CATATGCACAGCTCTTGTGG 59 218334 218352 TGAGACTTAGGATGCGACC 58 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-3316e FBgn0082968 FBtr0113523 1 1 1 64 2R 17218308 17218328 CAATCCTCACAATAGCAAGTG 57 17218352 17218372 GACTGTTCACAATGTAAACGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-aca4 FBgn0082922 FBtr0113512 2 1 1 60 2R 13504274 13504293 TGTGGCAAGAGTAGCTACTG 59 13504316 13504334 TTGATCTACCTTCAGCGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30423 FBgn0050423 FBtr0300122 2 1 1 111 2R 20762785 20762868 CATTGGTGATCACCTGGAC 58 20762692 20762710 AACATGGATCCGTATGGCT 58 NA Drosophila melanogaster 61 CG3589 FBgn0035065 FBtr0072375 2 1 1 84 2R 20672708 20672731 GTCTACCCAAACATAAATACAGCC 59 20672773 20672843 CATTTAAGTCGTTGGTGCGT 59 NA Drosophila melanogaster 61 uri FBgn0035025 FBtr0072308 2 1 1 80 2R 20454949 20455020 ATCCCAGAAGTCAGTTCTCC 58 20455061 20455081 CATTACTGGTCGGAGTTATGG 58 NA Drosophila melanogaster 61 Ir60e FBgn0035019 FBtr0273359 2 1 1 60 2R 20418424 20418442 AGTGTTCCTGAGCAATGAG 57 20418382 20418401 GAAGCAGTAGGTGTAGAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3328 FBgn0034985 FBtr0072257 2 1 1 125 2R 20060245 20060263 CAACCACACCATTGACGTG 59 20060351 20060567 TTGTTGGAGCTCAGATGGAG 59 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 1 2 2 154 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044543 20044566 CCTCATAAGTCCATTTAGGAACAC 59 NA Drosophila melanogaster 61 CG30172 FBgn0050172 FBtr0072193 2 1 1 134 2R 19918361 19918505 CTTCAACTCAAAGCTGCCC 59 19918245 19918263 TAGAAGCATGGCCCATACG 59 NA Drosophila melanogaster 61 CG3121 FBgn0034957 FBtr0072161 1 1 1 80 2R 19905274 19905294 ATTGGCTATGAGTTGAACGTG 59 19905333 19905436 AAGATGATCGAACAAGTTGTCC 59 NA Drosophila melanogaster 61 l(2)dtl FBgn0013548 FBtr0072085 3 1 1 102 2R 19590117 19590135 AAACGCAGATTACGAGCAG 58 19590475 19590493 TCGTAGGTCCTCTCATTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072103 1 1 4 134 2R 19496192 19502123 AGACTCAGTTGCTGTAAGGTC 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA InUTR Drosophila melanogaster 61 CG17662 FBgn0034884 FBtr0072106 3 1 1 97 2R 19493489 19493560 GGTATTTCGGGTCTCTTCAC 58 19493411 19493429 CAGTAGATCCAGTGGTGTG 57 NA Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112 1 1 2 180 2R 19435391 19435517 GCTGACGATAGTGCATCAG 58 19435229 19435250 GCACTTAGTGAATAACTGACGT 58 NA InUTR Drosophila melanogaster 61 Gr59f FBgn0041234 FBtr0072059 3 1 1 91 2R 19430076 19430148 CGAGGGAAAGACTATCTTCC 57 19430201 19430220 CACGGAGATGAGTAGTAACC 57 NA Drosophila melanogaster 61 CG34210 FBgn0085239 FBtr0112403 3 1 1 119 2R 19239121 19239140 TGTCTACTACCAAGTCGAGC 59 19239283 19239302 GGTTTCACCAGGAAGTTCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34371 FBgn0085400 FBtr0112596 2 1 1 82 2R 19060517 19063682 CATCTATACCTTTGATGCGCG 59 19060455 19060473 GGGCCTTCTTGTTGAACAC 59 NA Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 3 1 1 69 2R 18825682 18826030 GGGAGTGTTCCTTCCTCAC 59 18826063 18826081 TCAGTGATGATTGCAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 3 8 8 178 2R 18612192 18612210 CCAAGTCATACGATGCCAG 58 18611659 18612050 AAATCTTGCACTGCCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30196 FBgn0050196 FBtr0071927 1 1 1 83 2R 18542732 18542750 TACCCACGTGAAATCGGAG 59 18542575 18542686 CGAATGGGATTACAGCAGAG 58 NA Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071939 1 1 2 66 2R 18500859 18500877 GATGCCATGGAGTTTGCTG 59 18498886 18500830 GCCAGAGATTAGAAACTGGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 px FBgn0003175 FBtr0071838,FBtr0112820 3 2 3 80 2R 18424403 18424421 ACTGCAAGGATTACTTGGC 58 18424277 18424362 GAATGTTGTATCTTCTGTGCTC 57 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071850 2 1 4 128 2R 18188505 18199209 ACCGTCTAGATAAGACGCC 58 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 CG3045 FBgn0034703 FBtr0071787 1 1 1 80 2R 18060558 18060579 GGTAATCCTGTTGCAAGATTCC 59 18060443 18060519 TTCTCCAAACTCTCACATCGT 59 NA Drosophila melanogaster 61 CG11475 FBgn0034687 FBtr0071803 2 1 1 60 2R 17957869 17957887 CGACAATGCGGGATTTGAG 59 17957827 17957847 CGATTCTATGATGTACTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071746 1 1 2 115 2R 17607183 17607372 TTTCCCGAGCAATCAAGTG 58 17607086 17607105 AGAGATCATCGTCCAATCCA 58 NA InUTR Drosophila melanogaster 61 cv-2 FBgn0000395 FBtr0071610 2 1 1 85 2R 17246680 17251212 GAATGCCAGAACGGATTCG 59 17246613 17246635 CAAGTTCCATTCGACTTATCCAG 59 NA Drosophila melanogaster 61 CG9822 FBgn0034623 FBtr0071612 1 1 1 144 2R 17235326 17235346 GTACGGTAGATTTCAAACGGT 58 17235145 17235223 GCTTTCATGGAATTTACCATCG 58 NA Drosophila melanogaster 61 CG4302 FBgn0027073 FBtr0071625 3 1 1 99 2R 17101863 17101939 GCCAGAAATTAAGGAGATGACC 59 17101785 17101805 GTGGATACCCATCACATTGAC 58 NA Drosophila melanogaster 61 CG16799 FBgn0034538 FBtr0086249 2 1 1 84 2R 16540897 16541052 ATGTGAAGACTTCTCCAATGAC 58 16540834 16540852 CCAGTATTTGAAGCCCTCG 58 NA Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086478 1 1 2 87 2R 15588146 15588164 CATGAGCCTGATGAACAGC 59 15587996 15588095 ACAGCTCACAAAGCAATCG 59 NA Drosophila melanogaster 61 CG16716 FBgn0034459 FBtr0300829 3 1 1 81 2R 15483182 15483201 TACGAGCAGAATAAGCAACC 58 15483242 15483318 TTTGTATTGCCTGGAGATTCAG 58 NA Drosophila melanogaster 61 CG7735 FBgn0034446 FBtr0086534 3 1 1 81 2R 15332076 15332150 GAGATTTGTGGTGGTCAAGG 58 15332192 15332212 GAAGAGAATTGGCACAATTCG 58 NA Drosophila melanogaster 61 cer FBgn0034443 FBtr0086551 3 1 1 60 2R 15284057 15284138 GGAGTACAAGTCCAAGTTCGA 59 15284017 15284035 TCTACGACGCATCAGATCC 59 NA DesignRelaxed Drosophila melanogaster 61 cer FBgn0034443 FBtr0086551 2 1 1 60 2R 15284056 15284137 GAGTACAAGTCCAAGTTCGAC 58 15284016 15284035 TTCTACGACGCATCAGATCC 59 NA DesignRelaxed Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 2 1 1 133 2R 15137590 15137812 AGAACTGGAGAACAAGGCC 59 15137909 15137927 GATTGTCCAGCGTTACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15116 FBgn0034415 FBtr0086596 1 1 1 84 2R 14943260 14943278 TACGTTTGGGAATCCAGTG 57 14943141 14943212 AGTAAGTCCGCATTTGGAG 57 NA Drosophila melanogaster 61 CG5482 FBgn0034368 FBtr0086661 3 1 1 82 2R 14518062 14518143 CAAAGGAAGAATATTGGAGGGC 59 14518001 14518019 TTTCGGGTTCGAGAGTAGC 59 NA Drosophila melanogaster 61 Prp19 FBgn0261119 FBtr0086723 1 1 1 137 2R 14337086 14337104 GTTAAGCTGTGGGATCTGC 58 14335107 14336985 CAGGTAAACCCTGACATCG 58 NA Drosophila melanogaster 61 GstE8 FBgn0063492 FBtr0086676 3 1 1 60 2R 14295907 14295927 ATACGCCAATATAACTGCGTG 59 14295949 14295967 TGCCTCCTCGTAATAGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM1 FBgn0034329 FBtr0086662 1 1 1 64 2R 14271534 14271552 TTCTTCTCAGTCGTCACCG 59 14271580 14271667 GACAGTGGAACAGCATTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14492 FBgn0034283 FBtr0086818 3 1 1 91 2R 13781781 13781800 CTACCTGCTCCCTAATTGGA 58 13781648 13781666 TAATATCATCGCTGCTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG42239 FBgn0250868 FBtr0290307 1 1 1 89 2R 13460458 13460476 ACATTCGAGCTGTTTGTCC 58 13460526 13460616 CTTGAAGTTCTTCATATCGCCA 58 NA Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 3 2 2 84 2R 13406193 13406269 GGTGAAACTTCGAATGTCGG 59 13406315 13406334 AATCATTTCCGGACCAACAC 58 NA Drosophila melanogaster 61 Amy-d FBgn0000078 FBtr0086983 3 1 1 201 2R 13013535 13013553 GGCAGCAATCAGATCTCCT 59 13013718 13013736 CAATGTAGATGGAAGCCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15614 FBgn0034168 FBtr0087050 3 1 1 98 2R 12833850 12833868 ATAGCCTTCCGGAAATGGA 58 12833929 12834036 CATTTGGTGCTGATATCGCT 58 NA Drosophila melanogaster 61 Ugt37c1 FBgn0026754 FBtr0087076 2 1 1 60 2R 12731210 12731228 GACAAGTACACTCAAGCGG 58 12731168 12731187 GAGTTAAAGGTCGATCCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30324 FBgn0050324 FBtr0087181 3 1 1 60 2R 12175209 12175227 AGACGGACATTCCGATTGG 59 12175167 12175187 AGCGATTTATTGGTACAGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 2 3 3 60 2R 11589069 11589143 CTCAAGCCTGTGGTACTCC 59 11589027 11589047 TAATCAAAGAGTGTACGGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42524 FBgn0260429 FBtr0300853 1 1 1 81 2R 11518272 11525270 AAATGGAAGTCGAGAAGCAC 58 11525314 11525332 GGAAGTACCTTGGTTCCCA 59 NA Drosophila melanogaster 61 CG8195 FBgn0034032 FBtr0087353 2 1 1 83 2R 11452079 11452099 GCATTTACCTGCTAGTCATCG 59 11451960 11452037 GCTCCATCATAGCATAGTTTCC 59 NA Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 1 2 2 80 2R 11407475 11407494 TGCAATAATCTGAGCAACGA 58 11407358 11407433 GTTAACGCGATCGAAATCTG 57 NA Drosophila melanogaster 61 Ir52d FBgn0050464 FBtr0273344 2 1 1 60 2R 11395287 11395308 TTCGCAGATCTAGAGAATTCCA 59 11395327 11395347 GCATCTCAATATCGTACCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30470 FBgn0050470 FBtr0087326 1 1 1 60 2R 11348978 11348997 GTACTGCATTTGATTCCCAC 57 11349018 11349038 ATACACAGAACACGGTAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mtk FBgn0014865 FBtr0087386 2 1 1 75 2R 11296437 11296455 TACATCAGTGCTGGCAGAG 59 11296494 11296512 GTTAGGATTGAAGGGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 1 2 2 120 2R 11068205 11076268 CAACGACAAGGATCTGTGC 59 11076349 11076370 CTTGGTTATCTCCTGAATGTCC 58 NA Drosophila melanogaster 61 CG12863 FBgn0033948 FBtr0087500 2 1 1 115 2R 10508299 10508370 GGAGCTAGCAAGGTTATATGC 58 10508204 10508222 TCAGGACCCAGATATTCGG 58 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 3 2 2 80 2R 10495454 10495472 AGCTCTAGGAAACGCTCAG 59 10495328 10495413 AGATTAACGAACTGACTAGCGT 59 NA Drosophila melanogaster 61 CG30077 FBgn0050077 FBtr0301734 1 1 1 77 2R 10488855 10488873 CTTCCATGGTTAAGGAGCA 57 10488972 10488990 CTATTGCCTCCTTTCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 Obp50b FBgn0050073 FBtr0087552 2 1 1 84 2R 10258885 10258908 CAAATCCTTTCTGGATAAGTTCCC 59 10258951 10259023 ACATTCATAGCGGCAAGGA 59 NA Drosophila melanogaster 61 CG8617 FBgn0033925 FBtr0087561 1 1 1 187 2R 10244651 10244669 AGTACATGGAGGTCGAAGG 58 10244297 10244315 CATTGTGTAGCAACGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8589 FBgn0033921 FBtr0087562 1 1 1 80 2R 10189224 10189248 TATAATCGACTGTTATATCCCGTCC 59 10189099 10189188 TCTAAGGGTACTCTGTTGCTG 59 NA Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 3 2 2 80 2R 10151414 10151434 GGAACGACAGATTACCAACAG 59 10151286 10151372 GGATCAGTGCGTTCAAGTG 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574,FBtr0087573 3 2 2 81 2R 10121054 10121129 TAATTTCGACCATGACTGTCG 58 10120993 10121014 GGATTGCTCATATAATGCTTGG 57 NA Drosophila melanogaster 61 cbc FBgn0033842 FBtr0087701 1 1 1 98 2R 9371544 9371562 TAATCCATCATGTGCTGGC 58 9371396 9371482 TATCCACTTCGGTTACGCA 58 NA Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 1 2 2 94 2R 9241391 9241559 CAGTTCCACGATAACTGGC 58 9241315 9241333 CACCAGTAAAGCAACAGCA 58 NA Drosophila melanogaster 61 CG4714 FBgn0033819 FBtr0087756 1 1 1 87 2R 9139885 9139904 AGTGAGACCTTGAGTATCGA 57 9139760 9139835 GATCGGTATTGCGTTCCTC 58 NA Drosophila melanogaster 61 CG34439 FBgn0085468 FBtr0112741,FBtr0112740 2 2 2 60 2R 9046340 9046528 ATGATCGGCAATGCTTTCC 59 9046552 9046570 GCTGGTACATAACTCGGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 3 2 2 83 2R 9022188 9022271 CACCTATATGGATAAATTCTGCCAG 59 9022312 9022330 GAGAGGAGCATGTTCTGGA 58 NA Drosophila melanogaster 61 CG13323 FBgn0033788 FBtr0087797 2 1 1 63 2R 8934618 8934636 ACAACGACTACCTGCTGTC 59 8934573 8934594 TTCCAGTAGTTGTTCTTGATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 2 2 2 81 2R 8320535 8320556 CAAGCAGTTCAAGTACGATCAG 59 8320418 8320493 TACTGTGACGCTCTCATCG 59 NA Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0100374 1 1 2 114 2R 8283472 8283543 AACATATCGTCGGTTTCGG 58 8283620 8283639 TTTGGGATGAAACATTGGGA 57 NA Drosophila melanogaster 61 CG13177 FBgn0040759 FBtr0112772 2 1 1 82 2R 8051417 8051500 TCCTATAGAGGACAAGAAACCC 58 8051543 8051561 ATGGAGCTGCATAGTAGCC 59 NA Drosophila melanogaster 61 CG8979 FBgn0033669 FBtr0088053,FBtr0088051,FBtr0088052 3 3 3 123 2R 7855431 7855450 CTGTATTCACGGGAAACTCG 58 7855270 7855345 CTTGGAATGAAGGATCCGC 58 NA Drosophila melanogaster 61 Gr47b FBgn0041241 FBtr0088127 1 1 1 85 2R 7250564 7250644 TTTACCTGGTGTACAACGG 57 7250691 7250711 CTGGTGATCTTTGATTTGCTG 57 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299855 2 1 4 60 2R 7182309 7182328 TCACCTTACTAACCGTCTCC 58 7182268 7182288 GTACAGCTTGTAGCCAAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Eb FBgn0033598 FBtr0088112 1 1 1 60 2R 7143134 7143153 GAGGATGAGCAGAAGTATCG 57 7143174 7143194 CAGCAACTTCCTTATTGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsm10 FBgn0033554 FBtr0088248 1 1 1 60 2R 6708894 6708914 TTTGATCACTTTATGGTGCGG 59 6708854 6708873 CCAAGTACGAAGGTATGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088422,FBtr0088421,FBtr0088420 2 3 3 127 2R 6000450 6000525 ACATCGTTGGATTGGTTGG 58 6000616 6000634 ATGGGAGTAGGCTGTACTG 58 NA Drosophila melanogaster 61 Def FBgn0010385 FBtr0088432 2 1 1 79 2R 5942051 5942069 AAGTTCTTCGTTCTCGTGG 57 5941990 5942008 GGATCCACATCGGAAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088487 3 1 4 60 2R 5717354 5723956 TAACAATTCAGCGAACGACG 59 5717313 5717333 CTTTGAATCTGGTCGTGATCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0088491,FBtr0289980 1 2 2 80 2R 5712628 5712713 GAAAGTGGAGATAAGTACAAGGAC 59 5712571 5712591 TGTTTCCATCAACGTCTTGTC 59 NA Drosophila melanogaster 61 Map60 FBgn0010342 FBtr0088530 3 1 1 81 2R 5478740 5478758 GTGGAAGCTCTTCAGTCTG 57 5478800 5478885 CATGGGTACTTGATCATTCTCC 58 NA Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 1 2 2 80 2R 5290082 5290170 CTATCTGGCGCTCTACCTG 59 5290020 5290040 ATGAACAGGAACTGGAGAAGG 59 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 3 3 3 107 2R 5021179 5021197 CTCGATGTACGCCTACCTG 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 CG13741 FBgn0033374 FBtr0088632 3 1 1 80 2R 4980798 4980974 CATCTTCAAGAACATCGACTG 57 4980738 4980756 CTTCCTCCTTCACGTTCAG 57 NA Drosophila melanogaster 61 CG8230 FBgn0027607 FBtr0088674 3 1 1 81 2R 4834545 4834642 GGAGAACAGTCAGGACCAG 59 4834482 4834500 CGTCTTCAGGTTATTGCCG 59 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643,FBtr0088642 2 2 2 84 2R 4782910 4782934 GCTACATCTGGTACTTTATTAAGGC 59 4782976 4783052 TCGTCTTTGTTGTAGCCCA 59 NA Drosophila melanogaster 61 CG8735 FBgn0033309 FBtr0088730 2 1 1 118 2R 4485343 4485628 CGATGACTCTGATAAAGAGCC 58 4485245 4485263 TTGTCTCAGTCTCCATTGC 57 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787,FBtr0299788 2 2 2 128 2R 4461494 4461589 TATCCATGGTGCTTTGTGG 57 4461384 4461402 CTGTTTCTCCTTGGCACTG 58 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088813 1 1 4 60 2R 4036831 4036853 TCAGATCTATCAGATCAGTGTGC 59 4035881 4036817 CTCTTGATCCTGTTACTGATATGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42516 FBgn0260390 FBtr0300660,FBtr0300661 1 2 2 60 2R 4018482 4018503 GGTAAATGGAAGCATTTATCGG 57 4018443 4018461 AAAGAACACGTTGGTTCCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088822 2 1 2 128 2R 3985934 3985953 ATCCTGTTCCTGTACTTGCT 58 3985766 3985784 GCTCAAATTCAGTGGTGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34216 FBgn0085245 FBtr0112409 3 1 1 89 2R 3591413 3591760 TTCCCTTTATGCAAAGCCAC 59 3591343 3591361 TGGAGGAACTCCAGATGGA 59 NA Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 2 1 1 110 2R 3561475 3561553 TAGGTGCCAACCAGAAGAG 59 3561383 3561401 CCTTAAGGCGTTCATGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0300368,FBtr0088952 2 3 3 68 2R 3470143 3470161 TATCTGGAGATGCTTGCCT 58 3469834 3469852 ATCAATGTACTCCCGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30384 FBgn0050384 FBtr0089048 2 1 1 60 2R 3072032 3072050 GCCCGAAGTGATATGTCCT 59 3072071 3072092 TTCTACATTGAACACCTCCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ef FBgn0033127 FBtr0089023 3 1 1 133 2R 2914538 2914557 ACAACCTAAACGAGATCGGT 59 2914650 2914732 AATAATGAACGTCACTGTGCAG 59 NA Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 3 2 2 91 2R 2864779 2864799 CTTCCCATGCTCGAAATACAC 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 1 5 11 135 2R 2764827 2764845 CCGATCAGGCTGAATTTGG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 CG9445 FBgn0040674 FBtr0086210 2 1 1 96 2R 2726235 2726253 GAAGCCTTCTCCCACTACG 59 2726157 2726175 CTTCTATGGCCATCTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10396 FBgn0033020 FBtr0086089 1 1 1 151 2R 1241506 1241524 CAACTGTCGAATTTCCGGA 58 1241699 1241720 CCATAAGTCGAATACCATCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 3 3 3 154 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040328 AGCAGAAATATCTGATCCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111112 3 1 2 82 2R 434475 447873 TTGTACAAGCAGGTTTCCG 58 447914 447937 GCTCGGAGTGAATATAAGTAAGTG 59 NA Drosophila melanogaster 61 snRNA:U2:34ABa FBgn0004191 FBtr0080486 1 1 1 60 2L 13212032 13212051 TAGTTCCTCCATTGGAGGAC 58 13211991 13212009 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 1 2 2 80 2L 16840562 16841349 CTAGTAACCTAAGCCAGATGAC 57 16841390 16841408 CCATCAAAGTGCTCATCCT 57 NA Drosophila melanogaster 61 Tif-IA FBgn0032988 FBtr0085955 2 1 1 80 2L 22253616 22253634 CTGTAATTCGACATGCTGC 57 22253678 22253756 AAGTAACAGTGCTAAGCGG 58 NA Drosophila melanogaster 61 CG3635 FBgn0032981 FBtr0299879 3 1 1 81 2L 22183394 22183415 CTCCATGTTTAACTTTCTGTGC 58 22183455 22183536 CAACAGAGTCTGGTTCAAGTG 59 NA Drosophila melanogaster 61 dimm FBgn0023091 FBtr0081514 2 1 1 91 2L 21339203 21339221 AGACGGACACAATGGACTG 59 21339273 21339358 TATTGCTTAGCTGTGAAGTTCG 59 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 3 2 3 83 2L 21318352 21318370 TCGATGCTTACAAACAGGC 58 21318416 21318500 CAGGAGTATAGCATTGCACC 58 NA Drosophila melanogaster 61 ppk13 FBgn0053508 FBtr0091448 1 1 1 80 2L 21087583 21087666 CTCCTTTGTGCGTTACATCTC 59 21087523 21087541 CAATTCCTCTGATGGACGC 58 NA Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 2 2 2 80 2L 21079112 21079302 TGCATTATAGATCTCAGGAGGAC 59 21079341 21079360 GAACCAACTTATGGAAGCCG 59 NA Drosophila melanogaster 61 CG9335 FBgn0032895 FBtr0081426 2 1 1 68 2L 20852810 20856155 ACATCACAGCCATAAATGAGC 59 20856185 20856203 TTGTGTCCGAGCTACAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 2 2 2 139 2L 20095816 20095834 ATCTGCAGGGTAGCAAGTG 59 20095937 20096018 GTTGTCCTCGTTGTAACGC 59 NA Drosophila melanogaster 61 Nf-YB FBgn0032816 FBtr0081289 1 1 1 116 2L 19736476 19736494 AATCGCAAGACAGTCAACG 58 19736574 19736645 CGATTTGTTCGACTCTCGG 58 NA Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0081270,FBtr0100597,FBtr0081267 3 7 7 60 2L 19568861 19568879 CGATCTCCTCGTCCATGTC 59 19568819 19568838 CTACTAGTGACTGGAGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 1 3 3 80 2L 19457150 19457231 GATGATTGCTCTACTAGTGACCT 59 19457270 19457289 GCGTTGAAGACCCAATTCTG 59 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 3 2 4 199 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387579 19387597 TGGAACCGATAGATCCGGA 59 NA Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222,FBtr0081223 3 3 3 137 2L 19385786 19386098 TGGTCTGTGGAGATTTCCA 58 19385287 19385305 AGCTACCGCTATAACCTCC 58 NA Drosophila melanogaster 61 CG10650 FBgn0046302 FBtr0081183 3 1 1 85 2L 18995010 18995610 TTAACGCAGGAACTCTAACTC 57 18994945 18994963 ATTGTCTTCCTTGCAGGTC 57 NA Drosophila melanogaster 61 CG10431 FBgn0032730 FBtr0081134 3 1 1 60 2L 18974803 18974822 TTGCAGCCATAAGTATGTGC 59 18974843 18974920 CCGTTTGAATGGAAATCTGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 3 1 1 63 2L 18956464 18956487 GAATTAGTACTGGACAACTTTCCG 59 18956318 18956442 TTTCATCCATGCACTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 2 2 2 80 2L 18535125 18535201 AACTCCTTCCAGATTAAAGCC 58 18535065 18535085 CTGATCAAAGTGATGATGCTC 57 NA Drosophila melanogaster 61 bsf FBgn0032679 FBtr0081087 2 1 1 104 2L 18453463 18453481 GGAGCCACTAGGATTCTGG 59 18453311 18453395 CTCCAAATCATTGGCCTGC 59 NA Drosophila melanogaster 61 CG15155 FBgn0032669 FBtr0081048 3 1 1 82 2L 18155000 18155018 GCTGAAGGATGTGCAAGTC 59 18155058 18155141 CCACAAATATCTGATAGTGATCCAC 59 NA Drosophila melanogaster 61 CG33928 FBgn0053928 FBtr0091932 2 1 1 125 2L 17436473 17436546 ATGCATTTGGTGGAAAGTAGTC 59 17436369 17436390 CGATAGGTATTTGTAAGTGCGA 58 NA Drosophila melanogaster 61 CG32832 FBgn0052832 FBtr0080960 3 1 1 106 2L 16878866 16879025 TTTAAATGGTCCTTGGTGCT 57 16878779 16878797 CAAATTAAGCCCGTGACTG 57 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938,FBtr0080939 3 2 2 84 2L 16701451 16701473 GACCTTCAAGTATGCTACATCAC 59 16701296 16701407 CATAAAGGCGTAGTCGCAC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 1 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 Idgf1 FBgn0020416 FBtr0080860 2 1 1 100 2L 16445980 16446070 AACTCCACTTGGTACTTCGA 58 16446133 16446151 TCCTCGGGATTTCGTAGTG 58 NA Drosophila melanogaster 61 CG4891 FBgn0028520 FBtr0080815 3 1 1 60 2L 16095259 16095277 GATGTGAACGCGTAGTTGG 59 16095300 16095319 ATCAACACGGGATTATCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 2 2 2 90 2L 15230348 15236616 GGTGAATGTCATCATGGGC 59 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 CG33679 FBgn0053679 FBtr0091659 3 1 1 103 2L 15058606 15058626 TTCTACTATTTCTACACCGCC 57 15058754 15058772 ATACGATCATCCAAGGTGC 57 NA DesignNoJunction Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517 1 1 2 93 2L 13449362 13449447 CCGATATCAAGCAACGTGAG 59 13449288 13449306 ATGTCATTGGCAAAGGTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15485 FBgn0032442 FBtr0080412 1 1 1 60 2L 12667800 12667824 CCTTCTATCATATAGACTTTCCCGA 59 12667764 12667785 CCTATAATATTGCCCACTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17024 FBgn0032437 FBtr0080371 2 1 1 84 2L 12454485 12454591 GGTAATCCTATGTGTTCTGTTTAGC 60 12454630 12454651 CAGATTATTAATCACCGCCTCG 59 NA Drosophila melanogaster 61 Elf FBgn0020443 FBtr0080369 1 1 1 80 2L 12437929 12437947 AAGGTGGTTAAGGTGGAGG 59 12437991 12438082 TTTGCCAGCATCAACATGG 59 NA Drosophila melanogaster 61 CG16964 FBgn0032385 FBtr0080282 3 1 1 159 2L 11947986 11948004 AAACCGAATTCGAGCTCAG 58 11948197 11948215 TTTCTTCGGAACTTGCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14939 FBgn0032378 FBtr0080259 3 1 1 103 2L 11811656 11811675 ATCACGCTAGTCTACCTGGA 59 11811478 11811496 TTTGAGGCGAGGAGAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp33B FBgn0032376 FBtr0080265 1 1 1 80 2L 11791203 11791276 GTCGTGGTGAAATATCCGT 57 11791141 11791159 AATATCGGGAACGTTGTCG 58 NA Drosophila melanogaster 61 CG12602 FBgn0032373 FBtr0080255 2 1 1 82 2L 11743938 11743956 CTCACAGTCGGTATCCTGG 59 11744001 11744082 CTCATGAACTCAACCCAGTG 58 NA Drosophila melanogaster 61 CG31706 FBgn0051706 FBtr0080241 2 1 1 94 2L 11530639 11530657 GAACGTACTACGCCAATGC 59 11530173 11530582 ATCTCCTGTACCGATTCCTC 58 NA Drosophila melanogaster 61 Samuel FBgn0032330 FBtr0080161 3 1 1 83 2L 11029046 11029065 TTAACTCCTGGTCTGTGGAC 59 11014640 11029001 GATCACGAAACGACTGAACG 59 NA Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 3 1 1 178 2L 10737750 10737878 CATCTAATCTCACCCAAGCCT 59 10738018 10738036 CAGTGGAAGGTGAGATCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7300 FBgn0032286 FBtr0080125 2 1 1 60 2L 10695901 10695920 AAGCTGCATCTATTGGTGTC 58 10695860 10695878 CCCTTAGAAGCGGAATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 1 3 3 80 2L 10464362 10464381 ATCCATGTTCAAGAGCACCA 59 10464239 10464320 TCGCTATGATGAACAACGGA 59 NA Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 1 2 2 80 2L 10225332 10225350 TATGCTAGCAGAAGTGGGT 58 10225141 10225289 CCGAACATGCTGGAATAGTC 58 NA Drosophila melanogaster 61 ppk16 FBgn0065108 FBtr0100832 2 1 1 88 2L 9771415 9771498 CAACATTCAACAATGCCACAG 59 9771347 9771371 CTGAAATATGTCCGTTCGATATCTG 59 NA Drosophila melanogaster 61 CG13116 FBgn0032139 FBtr0079863 1 1 1 60 2L 9730558 9730576 CACTCTACCGAATCAGCAC 58 9730599 9730618 TCTGGGCATTAGAACTTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 3 2 2 100 2L 9613531 9615312 GAAAGATAAGGCCGATCTCGA 59 9615374 9615392 AGATCATCTTGCAGGGTCC 59 NA Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 2 2 2 100 2L 9460741 9460943 CAAGGTCTTGAGGCAATCC 58 9461007 9461025 CTATCAGGCCCTTGGTCTC 59 NA Drosophila melanogaster 61 CG9289 FBgn0032058 FBtr0079751 1 1 1 89 2L 8682022 8682109 TGATCGATCTTTGCAGCAC 58 8681951 8681970 GGTAAGTGCTATTGGGAAGC 58 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0302160 2 1 3 171 2L 8451891 8463634 ACTGTTCCTAGTTCCTCCC 58 8451738 8451758 GGCTATACTGATTAAGTGGCG 58 NA InUTR Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 1 2 2 166 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332448 8332466 AATTGATCACCGTCTTGCG 58 NA Drosophila melanogaster 61 Rbsn-5 FBgn0261064 FBtr0079581 2 1 1 83 2L 8161355 8161373 ACGAAATAACATGGCAGCT 57 8161420 8161503 TGAAGATCAGACCCTTGGG 58 NA Drosophila melanogaster 61 poe FBgn0011230 FBtr0079545 3 1 1 80 2L 8068144 8068225 AATATGGCTCATCAATTCGCC 59 8068084 8068104 TAAATTCCTGAGCCCAGTAGG 59 NA Drosophila melanogaster 61 Spn28D FBgn0031973 FBtr0079549 1 1 1 89 2L 8005550 8006439 GACTACAGACGGGTGATCG 59 8005479 8005499 GATATTGTATCGTGCTGTCGC 59 NA Drosophila melanogaster 61 Proct FBgn0045038 FBtr0079562 1 1 1 140 2L 7870366 7870384 CTTGGTTTGGATGACGGTG 59 7866127 7866145 TCCTCATTGCTCAACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 1 2 2 84 2L 7797721 7798170 ACTCTACGTTCTACGTTGCC 59 7797656 7797674 CAATCAGTGGGACTGAGGG 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511,FBtr0079513,FBtr0079512,FBtr0079510,FBtr0079514 3 5 5 80 2L 7699100 7699120 GTTGTAAACAACGACCTACAG 57 7698978 7699058 AGCCGATACATCAATCGAG 57 NA Drosophila melanogaster 61 CG5958 FBgn0031913 FBtr0079466 2 1 1 134 2L 7431185 7431203 TCACATTCATCCAGGAGGC 59 7430846 7431090 GGAAGTGCATCCTATTGTTCAG 59 NA Drosophila melanogaster 61 CG32829 FBgn0052829 FBtr0079370 1 1 1 60 2L 6916016 6916039 GGTCACAAGGAATTAGAATACCAC 59 6915979 6915999 TCTTCTCCTTGATGTACTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11221 FBgn0031855 FBtr0079303 3 1 1 258 2L 6743018 6753946 TGGGCACTATCGAGAAACG 59 6754168 6754186 ATGAGATGGATCTGTCCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11188 FBgn0031851 FBtr0079299 3 1 1 121 2L 6718979 6718997 GAGCGAGATTACCAAGCAG 58 6719144 6719162 TGATGAGCTTGTTGTGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Vm26Ab FBgn0003980 FBtr0079171 1 1 1 71 2L 5957440 5957458 GAACTACCTGTTCAGCTGC 58 5957493 5957511 GATCCGTAGGACTGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dsf FBgn0015381 FBtr0079145 1 1 1 280 2L 5937208 5937226 CTGGTGTAGGTTCCACCTG 59 5937470 5937584 CTTCCAGGATTCCTGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Sfp26Ac FBgn0259959 FBtr0300305 2 1 1 141 2L 5884618 5884636 ATGCCTTACCTGTGACTGG 59 5884432 5884513 TTCGGTGAATGGTTTCAGC 58 NA Drosophila melanogaster 61 GluRIIA FBgn0004620 FBtr0079106 1 1 1 80 2L 5556998 5557079 CATGATGAAGGAGGATCACGA 60 5557118 5557139 GAAAGCTTGCTAATGAGATCCA 59 NA Drosophila melanogaster 61 Lam FBgn0002525 FBtr0079100 2 1 1 80 2L 5544730 5544813 ATGGACATCAAGGTCTCCC 58 5544857 5544875 GATGTTCAAACGAGCCTCC 58 NA Drosophila melanogaster 61 CG14034 FBgn0250847 FBtr0110802 1 1 1 80 2L 5215636 5215720 GGACCCATTAATAAGATGGAGAC 58 5215578 5215597 AGGTGACGAAATAGACTCGG 59 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 1 2 2 166 2L 5048718 5048807 CTTTGCCAGGTTGCTATGC 59 5048570 5048588 GACTCCGACGAATCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14043 FBgn0031659 FBtr0078995 3 1 1 60 2L 4972073 4972092 TACATCTACACAGAGGAGCA 58 4972112 4972133 CTAGTTCCAGACAACGATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079051 1 1 2 117 2L 4971137 4971155 ATCTGCGACATCAATGTCC 58 4970769 4971059 CACCCTTAATCATATTCTTGGC 57 NA Drosophila melanogaster 61 Trip1 FBgn0015834 FBtr0079053 2 1 1 111 2L 4966962 4967035 CCATCATCACAGGTCACGA 59 4966869 4966887 AACTGCATGTCGTTGATGC 59 NA Drosophila melanogaster 61 CG17840 FBgn0031611 FBtr0077443 1 1 1 138 2L 4466993 4467070 TTTGACAAAGCAGGGTCCA 60 4467172 4467190 ACACGAATAGGGTAGGCAC 59 NA Drosophila melanogaster 61 CG15429 FBgn0031596 FBtr0077428 2 1 1 87 2L 4353119 4353138 ACTGCTGGGTGATCATACAC 59 4353188 4353260 TAGTCCAGTGTGCGATTCC 59 NA Drosophila melanogaster 61 CG3407 FBgn0031573 FBtr0077515 2 1 1 87 2L 3812525 3812603 CAGGATAAGCTGCAACAGG 58 3812456 3812477 GACTGATGTTGTGAAAGTTCTC 57 NA Drosophila melanogaster 61 CG16713 FBgn0031560 FBtr0077547 1 1 1 106 2L 3695218 3695291 TGCAATCTGTGGTCTACCC 59 3695130 3695148 ATTTGACGCACTCGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34340 FBgn0085369 FBtr0302391 1 1 1 100 2L 3673293 3678223 CCCATCCATATACCAGCTACTC 59 3678284 3678302 CTGTTGCAGTGTGAAGGTG 59 NA Drosophila melanogaster 61 CG17593 FBgn0031544 FBtr0077525 3 1 1 108 2L 3515266 3515726 GAGCACTTCCAGGATGAGG 59 3515795 3515816 GAGGGATGTTTGGTATGTTCAG 59 NA Drosophila melanogaster 61 CG33123 FBgn0053123 FBtr0077562 3 1 1 80 2L 3511136 3511156 GTGACTTTGGAGTTCGATGAG 59 3511015 3511097 CAAGACATCAAGATCCAGTGTG 59 NA Drosophila melanogaster 61 sec5 FBgn0031537 FBtr0077519 2 1 1 83 2L 3458180 3458257 CTTGGAAACATCCATAGAGAACTC 59 3458299 3458317 GAATCCGCCTTCTCTTTGC 59 NA Drosophila melanogaster 61 CG9643 FBgn0031485 FBtr0077675 1 1 1 60 2L 2979082 2979102 AGATCTGGTTTGACGAAAGTG 58 2979042 2979060 TTCTCCTCGTTAAGCAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Duox FBgn0031464 FBtr0300382 2 1 1 80 2L 2816583 2816601 GCGGTGAATCACTTTGGTC 59 2816459 2816542 TATCTTGGAGACGTATGAGTGC 59 NA Drosophila melanogaster 61 CG16995 FBgn0031412 FBtr0077758 1 1 1 80 2L 2308237 2308312 GGAATGGGCCAATTATTTGCT 60 2308352 2308372 GCCATGTAAATGTTCTCACCA 59 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 2 3 3 80 2L 2040347 2040429 GTTCACAGTGCTGATTACACC 59 2040471 2040489 AGCATGGCATCTTTACGGA 59 NA Drosophila melanogaster 61 CG42296 FBgn0259192 FBtr0299676 3 1 1 60 2L 2034532 2034550 CCAATTACGGAATGAGCCA 57 2034490 2034509 CTGTACTCGTGACTCTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr22c FBgn0045499 FBtr0077899 1 1 1 107 2L 1790757 1790832 AGAGAAGTGTGAACGAATTCG 58 1790670 1790690 TGATGATCATCTGGAAACCCA 59 NA Drosophila melanogaster 61 robo3 FBgn0041097 FBtr0077921 3 1 1 94 2L 1287038 1287168 CTTTGGAAGATGTTCCGGAG 58 1287225 1287243 TGGTTGTGGAGGTAACCAC 59 NA Drosophila melanogaster 61 CG9902 FBgn0030757 FBtr0074296 2 1 1 81 X 16439092 16439113 CATGATAAAGCAGAGAAAGCCA 59 16438945 16439052 CGTCTTCCGAAACTTCATACC 59 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 2 4 4 210 3R 26749269 26750041 ATCGCAAAGATGGCAATCG 59 26750215 26750233 ATGTCCGGATACCTGTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 2 2 2 93 3R 23212947 23214185 AATGATCAGGCGACATCTG 57 23212872 23212890 ATTGATATTCACGTCCCGG 57 NA Drosophila melanogaster 61 CG14259 FBgn0039483 FBtr0085104 2 1 1 85 3R 22920798 22920940 TCAAGGAGAGTCGTGTGAG 58 22920986 22921007 TTCATACCTTCCATCCAGTCTC 59 NA Drosophila melanogaster 61 CG14546 FBgn0039395 FBtr0084984 1 1 1 79 3R 21747754 21747772 CTACAGAATCAGGAGGCGA 58 21747595 21747613 AAGCTCGCTTCACTCTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL45 FBgn0038996 FBtr0084272 3 1 1 167 3R 18444324 18444410 TAAACTGCTGCAGGTTATGC 59 18444540 18444558 AACTTGAGCTTACGAAGGC 58 NA Drosophila melanogaster 61 CG31159 FBgn0051159 FBtr0084270 2 1 1 80 3R 18440604 18440680 CTACGACTGCTTTGGAACAG 59 18440722 18440741 ACTAGGGTTAATGGACCACG 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 2 5 5 88 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084167,FBtr0084168 3 2 2 80 3R 17600859 17600877 TGGGTCACGTTAATGAGCA 59 17600621 17600815 CAGCATTGCACTGAGTGTC 59 NA Drosophila melanogaster 61 CG11626 FBgn0038705 FBtr0113247 3 1 1 107 3R 15235692 15235769 AGTTATAGTGCTTCTATACCGC 57 15235836 15235855 CCTTCCTTCCGAATAAAGCA 58 NA Drosophila melanogaster 61 CG11686 FBgn0040551 FBtr0082735 1 1 1 96 3R 9086133 9087338 TCTACTTGCTGAAATCGCTC 58 9087397 9087415 AGACGAACCAGAAGACCAG 59 NA InUTR Drosophila melanogaster 61 Art1 FBgn0037834 FBtr0082304 1 1 1 80 3R 6613241 6613261 ATTGAGGAGATTGAGCTTCCA 59 6613094 6613200 GTAGAACAGGCAGTAACCCA 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876,FBtr0301878,FBtr0302326 3 4 4 99 3R 4611724 4612255 ATTTGGCAAACACTGCAGG 59 4611643 4611661 GTTTCATCAGCTGCACCTC 59 NA Nonspecific Drosophila melanogaster 61 Or83c FBgn0037399 FBtr0078620 3 1 1 82 3R 1903360 1903455 TTCAGACGGTGACAATGCT 59 1903296 1903314 TAGGATCTGCGTTAAGCCG 59 NA Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 2 2 2 194 3R 1561044 1561062 ATCTGGATGAGTTCGACCG 59 1560807 1560886 ACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041,FBtr0100044,FBtr0100042,FBtr0100039,FBtr0100043,FBtr0100040 2 6 6 119 3L 14223401 14223764 GTACCGAGAGTCGGAACTG 59 14223847 14223865 TTCATCTGGCAGTTCTCGT 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 2 4 5 109 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586650 8586668 GGTAAGTCGATGTCCATGG 57 NA Drosophila melanogaster 61 ImpL3 FBgn0001258 FBtr0077008 2 1 1 63 3L 6253526 6253612 TGGTAGAGTACAGTCCCGA 59 6253481 6253499 TAGGTCATGATGTCCACGG 58 NA DesignRelaxed Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480,FBtr0072482 3 3 3 84 3L 201357 201447 AGTATTGTCAGACCGTGCA 59 201495 201513 TTCATCACCTGTTTGGCCA 59 NA Drosophila melanogaster 61 CG10474 FBgn0034427 FBtr0086561 3 1 1 60 2R 15173128 15173146 GAATCGGTTGAGTGCTCAG 58 15173086 15173106 TAACTTGTCTATCGTCTTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 2 2 2 65 2R 11900057 11900075 CTCTTGGATAACCACGGCT 59 11900102 11900180 AAGCCCAAATAGTGATAGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087758 2 1 2 166 2R 9138860 9138944 AAGTCTGTTTCGAAAGGAGG 57 9138713 9138731 TGTGCCGTTGAATACTGTC 58 NA Drosophila melanogaster 61 SdhB FBgn0014028 FBtr0086156 3 1 1 139 2R 2695984 2696003 CAACTTCTACGAGCAGTACC 58 2696161 2696179 ACAGGATGCACTCGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9259 FBgn0032913 FBtr0081464 2 1 1 60 2L 21090658 21090678 TATTCTACCACCTCACTGCAC 59 21090698 21090718 AAAGTCGTTAAAGCCATCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mtp FBgn0032904 FBtr0081439 3 1 1 84 2L 20920336 20920354 GGGCTTTGTTCAAATCGGA 58 20920211 20920288 AGGACTGTCGTAAGACCCT 59 NA Drosophila melanogaster 61 CG10137 FBgn0032800 FBtr0081248 2 1 1 88 2L 19528928 19529098 CACACCAGTATCTTATACCTGAG 58 19529146 19529164 AAAGTACTGCGAGGATGGA 58 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 3 3 3 85 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457305 AAATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 3 2 2 81 2L 10229759 10229777 CAGTGAACCAGAATGGTGG 58 10229603 10229716 CATCCAATTCCCAACAAATGC 58 NA Drosophila melanogaster 61 CG34183 FBgn0085212 FBtr0112376 2 1 1 179 2L 9890644 9890722 GAGCAGTTGAGACAACAACTG 59 9890427 9890447 GTTTATTTCCCGCTCATCCAC 59 NA Drosophila melanogaster 61 Hsp60B FBgn0011244 FBtr0078000 3 1 1 60 2L 729465 729485 GGCGATGACATCAACTATTCC 59 729507 729525 CAACCTGACCCAGATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Iris FBgn0031305 FBtr0077986 2 1 1 60 2L 1133592 1133611 CTTCAAGAACCCTTTCACGA 58 1133551 1133572 GATACGGCTTCATCATAATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17078 FBgn0086855 FBtr0300804 3 1 1 80 2L 275244 275329 GGCTCTAGTCAATTCACCC 57 275182 275201 ATCTGGCCTTCAATGTAGAC 57 NA Drosophila melanogaster 61 5SrRNA-Psi:CR33371 FBgn0053371 FBtr0086363 2 1 1 60 2R 15647047 15647066 AATTAAACATCTTCCGGCGC 59 15647006 15647027 GATTCAGTAATCCCTAGTGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir41a FBgn0040849 FBtr0299925 3 1 1 80 2R 908552 908570 GTTGCTACGCTTAGCACAG 59 908614 908686 CCGATAGCAAAGTGACCGA 59 NA Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088355 3 1 3 114 2R 6243853 6243936 GACGATACAATACGATACACATGAG 59 6243763 6243783 AAACATAGCTCTTTCGGAAGC 59 NA InUTR Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 3 3 3 143 2L 21627752 21627854 GGTGACTCAACAGATGCTC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 3 5 5 81 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083058 1 1 6 95 3R 11068894 11070094 TTCGGTTGAATGTCTAAAGCTC 59 11070150 11070168 GATGATCTCGACCTTGCCA 59 NA InUTR Drosophila melanogaster 61 Cct2 FBgn0035231 FBtr0072742 3 1 1 94 3L 1554318 1554336 CTGACCCTCAGGATGAAGG 59 1554394 1554471 TTCGGAACGATCTCATCCA 59 NA Drosophila melanogaster 61 CG13527 FBgn0034776 FBtr0071880 3 1 1 115 2R 18651444 18651462 TCCATCAGATCGAGAACCC 58 18651541 18651620 TTGGATTGTCCCATGACAC 57 NA Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634,FBtr0083636 2 2 2 60 3R 14425529 14425549 TCTACGCGAGATCCTTAACTG 59 14425570 14425589 AATGGGTGTTTGGGATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41602 FBgn0085813 FBtr0114268 3 1 1 68 XHet 195218 195236 ATAAAGAAGCCGTCGAGAG 57 195267 195286 ACTTCCATGATAGTACGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17163 FBgn0039942 FBtr0113727 1 1 1 80 XHet 60674 60748 CCCATACAACCTAAGCAGG 57 60612 60630 GTCAAAGGCCTTAATGGGA 57 NA Drosophila melanogaster 61 CG10598 FBgn0003057 FBtr0074400 1 1 1 62 X 17120076 17120094 TACTCTGGCGGATATGCTG 59 17120032 17120052 GTTAATGACCTTCACGATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or13a FBgn0030715 FBtr0074133 3 1 1 80 X 15870527 15870546 CAGTCAACAGCCTGTAAGGA 59 15870588 15870678 GAGGTACTTAGAATGGCCGT 59 NA Drosophila melanogaster 61 dob FBgn0030607 FBtr0073961 1 1 1 60 X 14961655 14961673 TTCATTCCCGGACTGTCTG 59 14961925 14961945 CATCCATATAGCGAACTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG1368 FBgn0030539 FBtr0073891 1 1 1 226 X 14068848 14069010 CCTCAACTCAAGATGAAATTCC 57 14069197 14069215 GAGTAGGTCTGCACAGGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 3 3 5 198 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607536 11607554 TACTCGAACTGTTTGGTGC 58 NA InUTR Drosophila melanogaster 61 CG2444 FBgn0030326 FBtr0073531 2 1 1 199 X 11598766 11598862 AACAATTCATCGCATCCCG 59 11598585 11598604 AATTCGCGATTGATGTTCAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG1826 FBgn0030228 FBtr0071497 2 1 1 81 X 10663254 10663274 GGTTTGCCTAATGTTCATGGA 59 10663317 10663389 CAGCGATTCCTTGGATAGC 58 NA Drosophila melanogaster 61 CG12637 FBgn0030224 FBtr0071504 3 1 1 60 X 10567167 10567185 CTAGTGCGCAACTCTATGG 58 10567125 10567144 TGACATAGCTGGAGTGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Yp1 FBgn0004045 FBtr0071419 3 1 1 81 X 9948097 9948117 CTCGACGATTTCACCATTGAG 59 9948160 9948255 ACAGGTGGTAGACTTGCTG 59 NA Drosophila melanogaster 61 CG34028 FBgn0054028 FBtr0100083 1 1 1 180 X 9405632 9405720 CGAAGTAAACAAACGTGGAC 57 9405860 9405881 GATAGATATTAACCTCGCCCTC 57 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 2 4 4 80 X 8458342 8458361 GAGATCTTTGGCTCCTTTCG 58 8458402 8458530 CTTCTCCCACAAACCTAACAC 58 NA Drosophila melanogaster 61 Ir7f FBgn0259188 FBtr0299672 1 1 1 117 X 7777632 7777703 CTATCAGGGTTTGCTGGAC 57 7777533 7777551 CAATTGAAGCTCCTTGGGA 57 NA Drosophila melanogaster 61 CG14443 FBgn0029880 FBtr0070949 2 1 1 60 X 6529608 6529626 AAACAATATAGGCGTGCGA 57 6529650 6529668 TAGCCCATTGACTACCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 2 2 2 80 X 6160489 6160508 CTACAAGGACCTCATATGGC 57 6153746 6160447 GATATCCAGAAACGCTCCAG 58 NA Drosophila melanogaster 61 CG3062 FBgn0025612 FBtr0070692 1 1 1 82 X 4536172 4536242 TGCCCGAAGTGATAAAGGAG 59 4536109 4536127 AAAGGCACGGGTTATTCGA 59 NA Drosophila melanogaster 61 dgt4 FBgn0026085 FBtr0070642 2 1 1 60 X 4008508 4008527 CCCATCGTGTATCTGATGTG 58 4008550 4008568 CGCAAACTAGCGATATCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14269 FBgn0029658 FBtr0070532 1 1 1 60 X 3329189 3329211 CTACTACTGGAAGGGATTAGGTG 59 3329151 3329170 TAGGACAAACATGGAGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pn FBgn0003116 FBtr0070389 3 1 1 154 X 2075325 2075346 CCTAACAAATGTGCTTTCTACG 58 2075529 2075547 GTCCAAGTCACACGATTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 1 2 8 83 X 550806 551138 TAACCTGCAAGAGAAAGCC 57 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 CR41619 FBgn0085825 FBtr0114283 1 1 1 60 U 10029858 10029877 CCTCTAACTGGAACGTACCT 58 10029897 10029918 AGTATAGTTCACCATCTTTCGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 2 4 4 100 U 1179118 1179137 AATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377d FBgn0083048 FBtr0113595 3 1 1 60 3R 26032977 26032996 GCTAAGCGATTACCTAAGCT 57 26032936 26032957 GATTAGCGGCAGTTAATCTACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3405d FBgn0082957 FBtr0113592 2 1 1 102 3R 24428291 24428309 CTCCGCATAGCAATGTTCG 59 24428375 24428393 ATTGGTGCACAAACACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-aca3 FBgn0082923 FBtr0113586 3 1 1 83 3R 23749662 23749680 TACTCTTCTGGTTGTCCGA 57 23749726 23749745 TCAAGTTTCAATCGTAACGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3186 FBgn0086662 FBtr0091697 1 1 1 60 3R 1423817 1423835 GTTCAACTTGCAGCTGAGG 59 1423775 1423796 TCATCCAAGAGTCAGTATACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9f3Psi FBgn0038034 FBtr0082602 2 1 1 154 3R 8224465 8224483 CTCTACTTGGGCAACATGG 58 8223513 8223531 TTGATAAGATCTGGGTCGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15526 FBgn0039744 FBtr0085562 3 1 1 125 3R 25881879 25881981 GACATCAAACTTAAACTTCGGG 58 25882067 25882085 CTTCACGATCTCCAGTGTG 58 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555,FBtr0300600 2 5 5 80 3R 25859251 25859328 CATGAGTCTAAGCGGACAC 58 25859370 25859390 TTGTTTGTCAACTTCCTCGAG 58 NA Drosophila melanogaster 61 TwdlS FBgn0039443 FBtr0085034 2 1 1 92 3R 22462478 22462560 CTCTCCTTGTTGTTACTATGGAC 58 22462612 22462630 TCCTCCAGATGACACTTCG 58 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 1 2 2 106 3R 22186368 22186386 ATACCGCATCTCTGATGGA 58 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 2 2 2 91 3R 21305995 21306117 CTCAGAGAATATTACTGCATGATCC 59 21305928 21305946 GTGATTGGGTTGACGAAGC 59 NA Drosophila melanogaster 61 CG11878 FBgn0039310 FBtr0084821 1 1 1 80 3R 21100625 21100701 AGGATTCTATGCCGTATTCTG 57 21100742 21100761 TGCTCAATAGAAGCATCCTC 57 NA Drosophila melanogaster 61 CG13618 FBgn0039203 FBtr0084643 3 1 1 115 3R 20352521 20352539 AACTCGTTATAGACGCCGG 59 20352617 20352752 ATCCAGATCGGTTCTGTACC 59 NA Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 2 2 2 166 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006155 20006173 CCTGTTCTGTCGAGGATCC 59 NA Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 1 1 1 87 3R 19758875 19758893 CACCAAGGTCTATAGCGGG 59 19758736 19758824 AAGAGCCTTGCGAATACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17244 FBgn0039031 FBtr0084340 3 1 1 77 3R 18803138 18803156 ACAACTACGACGACCACAG 59 18803197 18803215 ACAGTCCTTCGGGATTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13840 FBgn0039028 FBtr0301686 1 1 1 60 3R 18641629 18641647 GCAAACACCATTACCAGGA 58 18641587 18641607 CGCGTATATCCTGTTAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13408 FBgn0038929 FBtr0084179 3 1 1 81 3R 17907605 17907625 AAGAATAATGTGGAGGGAGCT 59 17907668 17907985 TGTGCCTCAGATAGTCACG 59 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264,FBtr0084184 3 2 2 80 3R 17855917 17855937 ATGTATGTGCTCTATCTGGTG 57 17855791 17855876 CAAGCGCATATCAAAGTACG 57 NA Drosophila melanogaster 61 mRpL35 FBgn0038923 FBtr0084171 3 1 1 60 3R 17849866 17849885 CCTATAAGCCCTATCACAGC 57 17849905 17849926 ACCTTAAAGGTCTTTGACTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7044 FBgn0038854 FBtr0084035 3 1 1 90 3R 16926852 16926936 GAGCTTGATATAGTAAACAGAGCAG 59 16926786 16926804 TCATCAGACGTATGCCACC 59 NA Drosophila melanogaster 61 CG4335 FBgn0038795 FBtr0083894 3 1 1 89 3R 16233409 16233430 ACGATGTCTTAGATCTACCAGC 59 16233282 16233359 TGTGAGCATCACTCCACTG 59 NA Drosophila melanogaster 61 gwl FBgn0260399 FBtr0083674 1 1 1 80 3R 14574148 14574168 GATAGATAACGCAATCGAGGC 59 14574209 14574404 TTTGAGATGCGATTTCGCTC 59 NA Drosophila melanogaster 61 CG7695 FBgn0038631 FBtr0083694 1 1 1 80 3R 14442857 14442881 GAGGAGTACTTGACATTTAGTAACG 59 14442736 14442822 GGAAATAAATGAGTACGGCCTC 59 NA Drosophila melanogaster 61 GckIII FBgn0086736 FBtr0083399 1 1 1 60 3R 12913299 12913317 GACCTGAAGTCTGTGTTCG 58 12913340 12913359 TAAATAGGTCGCTCACTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 2 5 5 80 3R 12755406 12755424 ATGCGTATGTTTCCAAGCA 58 12755287 12755364 GGAACCATATCTTGACCTGTC 58 NA Drosophila melanogaster 61 CG10311 FBgn0038420 FBtr0083324 3 1 1 84 3R 12177650 12177668 TCGTCTTCTTCATCGACGG 59 12176937 12177603 CAATAGGTCATAATCGCGCA 58 NA Drosophila melanogaster 61 CG6276 FBgn0038316 FBtr0083123 3 1 1 165 3R 11145684 11145702 GAACGCTGGATAAGTCAGC 58 11145476 11145557 TAGTTTAAAGACCTCCTCCGT 58 NA InUTR Drosophila melanogaster 61 CG14375 FBgn0038147 FBtr0082762 2 1 1 82 3R 9215469 9215778 AAATCATGGTTTAACCGACCTC 59 9215408 9215426 TTCAATTCGGCGGAATTGG 59 NA Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 3 2 2 106 3R 8668402 8668420 AATTATCCGGAGCTGAGGC 59 8668034 8668332 GAGCCAGAGTTTGCATTCG 59 NA Drosophila melanogaster 61 CG14391 FBgn0038078 FBtr0082663 3 1 1 64 3R 8520330 8520351 CAGAGATCTACAGGATTGACAC 58 8520287 8520305 GTCACGATAGTGATCCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18616 FBgn0260444 FBtr0082643 3 1 1 87 3R 8457665 8457684 GGTTCCCGTTAAGCAATTCC 59 8457734 8457848 CACTAGTTTCGCCTCATGC 59 NA Drosophila melanogaster 61 CG4066 FBgn0038011 FBtr0082566 3 1 1 60 3R 8137743 8137763 TATCACCTCCTCACCAAACAC 59 8137781 8137803 GGAAGACTCGGTTATAGATTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ssp5 FBgn0037985 FBtr0082538 2 1 1 60 3R 7859304 7859322 GATGACCATGAGGGAACTG 57 7859345 7859364 TTTCTTATTCAGCCGTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ugt35a FBgn0026315 FBtr0082374 1 1 1 133 3R 6997998 6998083 AATAATGGCGGCATTTGGA 58 6997883 6997903 TCAGTAAATCCTTTACAGCCG 58 NA Drosophila melanogaster 61 CG4683 FBgn0037857 FBtr0082326 3 1 1 81 3R 6776475 6776494 AGATCCTGGTAGTGTATCCA 57 6776537 6776610 TGTCATCTTCGATATTGCGT 57 NA Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 1 2 2 80 3R 6030890 6030979 GGACTACGTTGTGCAACTG 59 6030828 6030849 TTGATGTGAACTTTGTAGGTGG 59 NA Drosophila melanogaster 61 CG16817 FBgn0037728 FBtr0082082 2 1 1 99 3R 5504358 5504449 ACATCGAACACAAAGTTACGG 59 5504510 5504528 TCGTGGAGGAAGTTCAGTG 59 NA Drosophila melanogaster 61 CG33191 FBgn0053191 FBtr0081941 3 1 1 60 3R 4604495 4604514 AACAAGGAGTTCTCCAACTG 57 4604454 4604473 CCTCGTCCATAATAGGACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS9 FBgn0037529 FBtr0081766 3 1 1 88 3R 3728020 3728038 GAGTTCCAGATCGGAAAGC 58 3727892 3727969 GATATCGCCTCGTCTATGTC 57 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0081587 2 1 2 80 3R 3190261 3190340 CTTCTAAAGACCGTTGACTTCTC 59 3190203 3190222 GACCACAGCAGTAATATCCG 58 NA InUTR Drosophila melanogaster 61 Edg84A FBgn0000552 FBtr0081688 1 1 1 80 3R 2510228 2510307 ATGTTGGTTAAGACTGCGC 58 2510350 2510369 ACTTCCAGATGATTTCGCTG 58 NA InUTR Drosophila melanogaster 61 Tim17b1 FBgn0037310 FBtr0078784 1 1 1 85 3R 1126159 1126177 CTTCCGGAAGAAGGAGGAC 59 1126224 1126435 AGGTTAGTCCAGTTCTAGCAG 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 3 5 5 141 3R 452789 452807 TTTGGGACGCTATATGGGA 58 452912 452991 ATTGACCAGACCAAGAACG 57 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 1 2 2 90 3R 163947 163967 GGTGAATTCAACTTCGGACTC 59 164016 164777 CAAAGGTATACACATCAACCGA 58 NA Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078955 1 1 2 81 3R 158871 158953 GACGTAAATGTGTACGGTCAG 59 158810 158828 GGATCAGGGAGTCTGAAGC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-3308 FBgn0082973 FBtr0113601 2 1 1 60 3L 832619 832639 GTCGCACAAATCCCTATTGAG 59 832579 832598 CGTTCAAAGGTCTTACTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524,FBtr0078523 3 2 2 60 3L 22711397 22711415 CCTCCATCTCACTTACCGA 58 22711437 22711457 TCAGCATATGGTCTTGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6480 FBgn0036964 FBtr0074847 1 1 1 84 3L 20289494 20289512 AAGGATGGAATGGTCACGG 59 20289369 20289446 GAGCCATTCGTTGTTCCTC 58 NA Drosophila melanogaster 61 Chd3 FBgn0023395 FBtr0074998 2 1 1 60 3L 19442140 19442159 CTAAAGGCGGACAATCACAG 59 19442181 19442200 GAACATTCAGCATCTTGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6812 FBgn0036843 FBtr0075025 3 1 1 141 3L 19056807 19057436 CAGGTATCAACCCTCATCGA 59 19057540 19057558 CCATTGCTTTGGCTTCCAG 59 NA Drosophila melanogaster 61 MED11 FBgn0036811 FBtr0075054 2 1 1 153 3L 18739053 18739072 AATCCTGTGCATGCAAAGTG 59 18739241 18739261 CTGGGTCAAGTAGTTGATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 U4-U6-60K FBgn0036733 FBtr0075209 2 1 1 60 3L 17506435 17506453 GCTAAACGAACCCATTTGC 58 17506393 17506413 CTTAAGACGTCTTCTTCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 2 3 3 80 3L 17035132 17035213 GGAACAAGCTCTGCTAAAGC 59 17035071 17035089 GGATGTTGCATGTAGTGGC 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 1 3 3 80 3L 17035254 17035274 CAAAGTTCGAGTTCCTCTACG 58 17035132 17035213 GCTTTAGCAGAGCTTGTTCC 59 NA Drosophila melanogaster 61 CG7728 FBgn0036686 FBtr0075274 1 1 1 138 3L 17011515 17011593 TATCAGGGTGATGCCACTC 58 17011695 17011713 TTTCTGCGTCACTCATGTC 58 NA Drosophila melanogaster 61 CG5161 FBgn0036573 FBtr0075491 2 1 1 83 3L 16124527 16124604 GAACTAAGGAAAGAGGACCAC 58 16124464 16124483 CTTCCATTTGTGCTCATCCA 58 NA Drosophila melanogaster 61 yellow-k FBgn0036504 FBtr0075556 3 1 1 93 3L 15514353 15514372 CCAGTGGATTTCATCTTCGG 58 15514426 15514446 CTTCAATTTCCAGTCTGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8833 FBgn0036386 FBtr0075792 3 1 1 89 3L 13920553 13920572 CAAACTGAACTAGCCAAGGA 57 13920425 13920501 CATAGCAGAAGGCAAGTCC 58 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 1 4 4 83 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901999 13902017 AACACTTCTCGCAGAGTCC 59 NA Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 1 2 2 95 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002072 13002091 GTTTCGCTAAATCCAGTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14119 FBgn0036322 FBtr0075869 2 1 1 60 3L 12885126 12885145 GATCGAATGGAGCTTATCCC 58 12885165 12885186 GCAGTAGTGTACGTATTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6083 FBgn0036183 FBtr0076137 1 1 1 88 3L 11618777 11618796 GACTGCGCTCATATCTATGG 58 11618644 11618726 AGTTCATCTCGTGTGACCA 58 NA Drosophila melanogaster 61 wls FBgn0036141 FBtr0076219 3 1 2 87 3L 11161290 11161310 GGTGTTTAGGAATATTGGCGA 58 11160695 11161247 GCGATAGATAAGACCTTCATAATGG 59 NA Drosophila melanogaster 61 CG32050 FBgn0052050 FBtr0076338 3 1 1 60 3L 9820690 9820708 CATCGCCGGTTAATCTTCC 58 9820731 9820750 ATATTGTGACCTTCGAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pall FBgn0036005 FBtr0076471 1 1 1 83 3L 9480577 9480595 ATCATTATGGCCCATGCCA 59 9480443 9480530 TAGAATGTGGTTCCTGCGT 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076544 3 1 6 173 3L 9055562 9055927 GTGCCTATAGTTAAAGCAAACG 58 9055410 9055428 GATCTGGTTTAGGAGCAGG 57 NA InUTR Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 2 2 6 96 3L 9044291 9044310 AAAGGAGAAGGTGATCGAGG 59 9043444 9044232 CATGGTGTCTTGTTTGCCA 59 NA InUTR Drosophila melanogaster 61 CG5068 FBgn0035951 FBtr0076519 1 1 1 83 3L 8980425 8980443 TCGATATGCGAGGTCATGG 59 8980490 8980845 AGTCACCGATGTCCTTAGC 59 NA Drosophila melanogaster 61 SrpRbeta FBgn0011509 FBtr0076598 3 1 1 88 3L 8712804 8712822 TATAAACACCGTGCCAAGG 57 8712677 8712752 GTGTACAGAAAGTCTGCCA 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114547 1 1 9 112 3L 8354557 8354581 GAGATGGGTAACTATTTATCTAGGG 58 8350990 8351118 TGATCTTCTGGGCCATCTC 58 NA Drosophila melanogaster 61 CG13671 FBgn0035867 FBtr0076706 3 1 1 60 3L 8295216 8295237 CTGGGATATCTATGAACGGGAG 59 8295256 8295276 GTTGTTGAACTCCCTTAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL36 FBgn0042112 FBtr0076735 3 1 1 78 3L 8117977 8117995 TGGAATCTGTCAGACGTCG 59 8117917 8117935 TCCCTTGACCTTGAATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8281 FBgn0035824 FBtr0076748 1 1 1 60 3L 7906506 7906524 ACGAGATTCTCTTCGAGGC 59 7906546 7906566 TTGTTGATTTGCACAGATCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14838 FBgn0035799 FBtr0076801 2 1 1 80 3L 7576844 7576925 GTCATGGTCTCTGAGAAAGC 58 7576967 7576986 CTGTTTCCATGGAAACTCCT 57 NA Drosophila melanogaster 61 Rac2 FBgn0014011 FBtr0076867 1 1 1 60 3L 7427273 7427291 GTGTGCCGATAATCCTGGT 59 7427231 7427249 TCGATCGTCTGCTTATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13299 FBgn0035694 FBtr0077013 3 1 1 110 3L 6225294 6225375 TCATGCAGACAATCAACGC 59 6225202 6225220 GATCGAACCTGAGGATGGG 59 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 3 2 2 80 3L 5429399 5429627 GAGAACTCCTATCGTGCCC 59 5429670 5429689 CGAGATGCATCGATAGTTGC 59 NA Drosophila melanogaster 61 membrin FBgn0260856 FBtr0077145 3 1 1 107 3L 5359813 5359831 TTGAAGATTACCCAGGCGA 58 5359971 5359989 TTTCAGCTGATCCACACGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 2 5 5 66 3L 3300762 3300780 TAGTACCACCGATCTGGAC 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32305 FBgn0052305 FBtr0301322 1 1 1 80 3L 2251094 2251114 ACTGAGTATTATCGAAGCCCA 59 2251155 2251227 ACACAGTAAGTGACAGTCCA 59 NA Drosophila melanogaster 61 CG12026 FBgn0035289 FBtr0072836,FBtr0072837 2 2 2 103 3L 1890363 1890383 GCTGACCATATTCTTCTTGGT 58 1890446 1890632 CCACAATCATGCAAATAGCTG 58 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 3 4 4 112 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345760 1345779 AACTTAAGGAATGCGTTCGG 59 NA Drosophila melanogaster 61 CG34263 FBgn0085292 FBtr0112458 3 1 1 83 3L 265753 265771 ATCGTCGACAAATGAGCAC 58 265632 265706 GGTTTCCAATCCTTTCCCG 58 NA Drosophila melanogaster 61 5SrRNA:CR33359 FBgn0053359 FBtr0086351 1 1 1 60 2R 15651512 15651530 ATACATCGGTTCTCGTCCG 59 15651470 15651488 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ance-5 FBgn0035076 FBtr0072420 1 1 1 142 2R 20776460 20776478 TGTCATGGAGATAGCCACC 58 20776276 20776355 TTCGACACAATTCATCTGCA 58 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276,FBtr0300874 2 3 3 60 2R 20090087 20090265 CAATAGCGGCAAATTCCAG 57 20090045 20090063 ATATCGCAGCGTATTCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 3 4 4 80 2R 19940648 19940730 GATCTAATAGTCGGCATCGGA 59 19940588 19940610 GTACGAAATGATCTCCAGTAGGT 59 NA Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192,FBtr0072191 2 2 2 60 2R 19920083 19920101 CTTCTTCACGAAGGTCTGC 58 19920041 19920061 GTAGTCGTCGTACATGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13565 FBgn0034935 FBtr0072209 1 1 1 80 2R 19836057 19836076 ATCTATATGTGCTCCTGGCG 59 19835905 19836016 CGTCGTTGGAAATATCCACAC 59 NA Drosophila melanogaster 61 Nap1 FBgn0015268 FBtr0072219 2 1 1 81 2R 19794235 19794739 TAACCGAAGTGAGATCAGCA 58 19794173 19794191 GATTTCGTTGCAGGACTCG 59 NA InUTR Drosophila melanogaster 61 CG5569 FBgn0034919 FBtr0072128 1 1 1 96 2R 19753215 19753233 TTATGGTCACCGGCTACAG 59 19753293 19753724 CAGGACAGAACCGATCTGG 59 NA Drosophila melanogaster 61 CG4763 FBgn0034910 FBtr0072238 1 1 1 92 2R 19711421 19711529 CTTTACGGACTTTGACTTCGT 58 19711349 19711367 AATTCCGTTGAATTTGCGC 58 NA Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 3 2 2 109 2R 19580461 19580482 ATCTTTCTCGTTCAGAACTCTC 58 19580315 19580392 GGAAGTATTATTGGGCACCT 57 NA Drosophila melanogaster 61 RpS16 FBgn0034743 FBtr0071855 2 1 1 184 2R 18494088 18494106 GATTGAACCCAAGGTCCTG 58 18494546 18495271 CCTCATCGACGTATTTCTGG 58 NA Drosophila melanogaster 61 qkr58E-3 FBgn0022984 FBtr0290254 3 1 1 131 2R 18297520 18297828 GAGTACAGCAAACCACGTC 58 18297407 18297428 AAGTATTGTATACGGATTGGGC 58 NA Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 3 3 3 80 2R 18025744 18039164 TCAACCACTCACGATTCTG 57 18050415 18050435 AAGAGACGCATACTATGTTGG 58 NA InUTR Drosophila melanogaster 61 CG10914 FBgn0034307 FBtr0086745 1 1 1 60 2R 14046586 14046604 CGAGGAGCTAATAACGCAG 58 14046628 14046646 CACCAGATAGACATCGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Amyrel FBgn0020506 FBtr0087117 1 1 1 82 2R 12539604 12539622 ATCACCTCATCGAACTGGG 59 12539484 12539563 GTAGATGTACTCTAGATCTTCCGA 58 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370,FBtr0087369 2 2 2 81 2R 11144982 11145002 CTGGATCATTATTGTGTCCGT 58 11145042 11145127 GAAGAAGCCAAACTTGTATAGC 57 NA Drosophila melanogaster 61 CG30075 FBgn0050075 FBtr0087555 3 1 1 60 2R 10263981 10264001 GTTTGTGCTACATAAAGGCGT 59 10264019 10264041 ATCTTATCCTTGATACCCTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087564,FBtr0087565 3 2 2 60 2R 10157041 10157062 CCAGCCAAATGAGTATATTGTG 57 10157002 10157020 GGTTAGCACCAGTACATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087565 2 1 2 164 2R 10157671 10158057 GCACAAGCAAACCTATAAAGC 58 10157527 10157545 CTTTAGATCTGCGAAGCGT 58 NA InUTR Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 2 2 2 80 2R 10057018 10057085 CTTCTACATGATAAAGGCCCA 57 10057127 10057145 ATCGAAGTATGCTTGTGCT 57 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 2 2 2 60 2R 8574567 8575104 ATGTCGAGGATAATGAACCCT 58 8575126 8575144 TCATCATCCAGGTCATCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 3 2 2 92 2R 7294170 7294188 CGAGGAGCTCTTAGTGGAG 59 7294243 7294317 ACCACAGTTCTCATGAAGCA 59 NA Drosophila melanogaster 61 CG1809 FBgn0033423 FBtr0088520 1 1 1 80 2R 5450892 5450983 GTCCATCAATGGTTATCCTTATCG 59 5451017 5451040 ATCGTATAGGGCAGATTATCATCC 59 NA Drosophila melanogaster 61 Cyp4e1 FBgn0015034 FBtr0088746 3 1 1 125 2R 4336525 4336544 CCACGTTTCAGGAGATATCC 57 4336629 4336704 TGTCACCATCAATTACGTAGTC 58 NA Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0113374 2 1 2 88 2R 3817890 3817970 CCCAGTGATAAGCGTTTGG 58 3817820 3817838 TCGATGAGCGCACTATCAG 59 NA Drosophila melanogaster 61 CG30494 FBgn0027604 FBtr0088918 3 1 1 60 2R 3529408 3529428 CTGATGCCCTAACTCAATCTG 58 3529446 3529468 ATCTCTACATTATCCAGCGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12842 FBgn0033131 FBtr0089029 3 1 1 85 2R 2926749 2926953 ATTGGAGGCTTATGGCCTC 59 2927000 2927020 GAATTATTGGCCTCACTCAGG 58 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 2 4 4 83 2R 1925631 1925650 GAGATGGGCTTCAAACTCTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-640d FBgn0083023 FBtr0113547 2 1 1 78 2L 20419669 20419687 TCTACAATGCTCCAAGAGC 57 20419727 20419747 CGAATTAAATGCATCCACAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 1 3 3 83 2L 21172326 21172344 TATCCACGAGACCAACCTG 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 CG2611 FBgn0032871 FBtr0081387 1 1 1 131 2L 20650448 20650542 TATCGGTGGCATTGTTTGC 59 20650637 20650655 ACATAGTAGCTTCCCGGGA 59 NA Nonspecific Drosophila melanogaster 61 RanGap FBgn0003346 FBtr0081234 2 1 1 83 2L 19445958 19445982 CATGAACGACAATACTCTAAAGTCC 60 19446023 19446111 CTCATTTCACGCAGCAGTG 59 NA Drosophila melanogaster 61 CG42555 FBgn0260757 FBtr0301254 3 1 1 80 2L 16891726 16891802 ATGTCTCAGAAGATCTTTCCCA 59 16891840 16891861 ATCTGTTGTATATGTGCAGCTC 58 NA Drosophila melanogaster 61 CG4580 FBgn0032585 FBtr0080865 3 1 1 182 2L 16489423 16489443 CCAGTACTACCAAGACTTGCA 59 16489587 16489658 AAGAATGGCTGAGGTGGAG 59 NA Drosophila melanogaster 61 CG13258 FBgn0032582 FBtr0080853 1 1 1 84 2L 16292721 16292969 TGGGTTTCAGAATTGTGCTC 58 16292656 16292674 ATCTTCACCCAATCCTGGG 59 NA Drosophila melanogaster 61 CG17329 FBgn0028896 FBtr0080827 2 1 1 60 2L 16291464 16291482 GCATCTGAATACTCAGCGT 58 16291505 16291524 ATACTGCAGCATCTTTCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17329 FBgn0028896 FBtr0080827 1 1 1 60 2L 16291464 16291482 GCATCTGAATACTCAGCGT 57 16291506 16291524 ATACTGCAGCATCTTTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beat-Ia FBgn0013433 FBtr0080806 3 1 1 90 2L 16056331 16075109 CACATTAGAGATGACCGCAG 58 16075161 16075180 GAAGCATTTCAGTATGGCCT 58 NA Drosophila melanogaster 61 CG18478 FBgn0028517 FBtr0080757 3 1 1 91 2L 15670248 15670269 GCTTGGACACTAATAGTAGCAC 59 15670320 15670439 CCATATCCGCACTTTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496,FBtr0301495,FBtr0114465 2 4 4 80 2L 14602379 14602398 GAGCAGAAACACAAGATGGA 58 14602244 14602336 CAAAGTGGCCTGAGTTTCC 59 NA Drosophila melanogaster 61 Oatp33Eb FBgn0032435 FBtr0080370 2 1 1 80 2L 12448711 12448810 CCAACAATATACCCGATGACAG 59 12448851 12448869 CATATTTCTGGCATCCGGG 59 NA Drosophila melanogaster 61 ppk10 FBgn0065110 FBtr0100097 1 1 1 80 2L 10451696 10451773 CGGATTATTGTCGTAACAATGG 58 10451637 10451655 TCGAATTGGCCAAGTTCTC 58 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0089853,FBtr0301064,FBtr0301065,FBtr0089854 3 4 4 80 2L 9519063 9519152 AAATACGTTCCTGGACTGTG 58 9519195 9519213 CGTAAACGATCGCAAAGAG 57 NA Drosophila melanogaster 61 CG32987 FBgn0052987 FBtr0079735 1 1 1 60 2L 8863909 8863927 CCAATGACCCAGTTCATCC 58 8863948 8863969 CCGTAATTCCGATAAGGATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0302160 1 1 3 112 2L 8463712 8463730 AACAACTGTTACGCCTACG 58 8451893 8463641 GAGGAACTAGGAACAGTTATTTCC 59 NA InUTR Drosophila melanogaster 61 CG31902 FBgn0051902 FBtr0110841 3 1 1 81 2L 7888033 7888051 GAGATTGACGAAGAAGGCG 58 7887913 7887990 CCACACTAGTCGCATAATCAG 58 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 1 3 3 113 2L 7032325 7032343 CCAGCTAGTGATAGAGCCC 59 7032086 7032104 AGGAACTTGTAGTCCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11236 FBgn0031860 FBtr0079339 1 1 1 80 2L 6803508 6803596 CAGCGTTAAGTTCACGTCTG 59 6803639 6803657 CGCTTCATCAAATACGGCA 59 NA Drosophila melanogaster 61 CG9523 FBgn0031812 FBtr0079257 1 1 1 92 2L 6425661 6425738 TCCTGTCAACTATGCAGCC 59 6425794 6425812 TTCATCAGCAGACGTGAGG 59 NA Drosophila melanogaster 61 tectonic FBgn0031783 FBtr0079209 1 1 1 134 2L 6129913 6130064 ATCTGCTCTACTCGGTTCG 59 6129797 6129818 CATTGTAATTGTGCGAGATTCC 58 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079152 3 1 2 282 2L 5923466 5923543 AAAGTTGAGCAGCATGGAC 58 5923202 5923220 AACTCTTTGGTGCTAGCGT 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG18269 FBgn0031719 FBtr0079103 3 1 1 60 2L 5552559 5552579 AAGATCGACTACTGGTATCCG 58 5552601 5552619 CCTGAGGATCCAAGTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 3 2 2 111 2L 5331345 5331365 CTCAAGCTGATCATATGCGAC 59 5331191 5331278 GCTTGTTATCTGGATACAGATACAC 59 NA Drosophila melanogaster 61 mRpL27 FBgn0053002 FBtr0077451 1 1 1 174 2L 4459367 4459385 AATAAGAAGGGCCATGCGA 59 4459153 4459171 CATAAACCTTGCCGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3213 FBgn0031545 FBtr0077561 2 1 1 60 2L 3517997 3518019 GAGCTAAGTTCCAAGAGAAACTG 59 3517959 3517978 TCGTTCTCTAAGAGCTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3213 FBgn0031545 FBtr0077561 1 1 1 60 2L 3518037 3518057 AATCGAACAGCAGATCAACAC 59 3517997 3518019 CAGTTTCTCTTGGAACTTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077964 2 1 2 80 2L 1166854 1166873 AGACAAGTCTGGAGTGAACC 59 1166915 1166994 CGCTTTGAGTATCTGTTCCG 59 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 3 1 2 211 2L 1038314 1038332 CGAACTGGTACAGATGCAG 58 1038506 1038597 TGAAGTCCGAAAGGATTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 KH1 FBgn0086130 FBtr0078009 2 1 1 107 2L 812488 812572 AGATTTCCCTTCCACTTGGT 59 812637 812660 GTCTATGACTTTGTGAAGGATCTC 59 NA Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064 2 1 2 80 2L 546435 546578 CACTTGTGGTAATCTTCTACAGC 59 546616 546636 CCAGGTACAGAACTAGAACCT 58 NA Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 1 2 2 258 2L 542544 542564 ACTTATACCTTTAGCGAGCAC 58 542227 542245 TGTAATAGCAATGCCGGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpI135 FBgn0003278 FBtr0078054 3 1 1 194 2L 404462 404542 AAACTCAGCAGGCATTTGG 59 404700 404718 ATCAATCACATCTTGCGGC 59 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 1 3 3 81 2L 74975 74994 ATAAGTTTCACGGTGACTGG 58 75091 75115 CTCGAGAGTCATTGTTATAAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 2 1 1 232 2L 87034 87052 GCGCATCGGAATTATCAGC 59 84078 84096 ACCTACGACTTTGAAGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 1 3 8 101 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119988 120007 GATTTGGGAGGTTGTACTGC 59 NA InUTR Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 1 2 2 80 2L 410171 410192 GAGTTTCGCCAGAATTTAGGAC 59 410059 410133 CACAGGATTGAAGTTTGTCAGG 59 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0112936 3 1 2 166 2L 943492 950503 GAGTCTTCACATGGACTTCAC 58 951639 951657 AGAAGTCGTTCGAGAAGCT 58 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077927 2 1 2 98 2L 1368472 1368576 GGTTCAATCCGTACGAACC 58 1368638 1368656 TGTCCTTGTCGCTGTAGAG 59 NA Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 1 2 2 140 2L 2263744 2263822 GAATGGGCCAATCATCTCC 58 2263924 2263944 GCTATTGATTTCCCGATACCA 58 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 3 2 5 103 2L 2452403 2455066 TATAAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 1 2 2 96 2L 2718917 2719014 TCATTATGCTGACTTCCTGGA 59 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 1 3 4 147 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740641 2740659 TCTCCTTGGTGAACACCTC 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 3 3 6 81 2L 3097976 3097994 CAACAGACAACCAAGGGAC 58 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077606 1 1 3 112 2L 3292710 3292728 GAGAGGTCCTTTACGCTGG 59 3292564 3292634 CACACTTCCAGGGATACCG 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 2 4 11 180 2L 3626210 3634252 TTATGTCATGGAAGATGGACG 58 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 3 8 9 86 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 2 4 4 63 2L 4904916 4904940 CCTCCATCTTATCCATAGTTTACTC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 1 2 2 80 2L 5736113 5736198 CCAAACAGGCAAATTGTATTGG 59 5736054 5736075 ACTTGATCATGATGTTGGTAGG 58 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 2 3 3 88 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095144 6095249 GGTAGAGCGGATTCATATTTGG 59 NA Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 1 2 2 80 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469926 6469944 ATTCCCTTGGGATGATCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410 2 1 2 97 2L 6635720 6635741 AATATTCAACATTGGCTCCTCG 59 6635398 6635662 CTGTAGCGTTCTGTGAGCT 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327 3 1 4 88 2L 6680045 6680063 AATGATACCGGGAACGGTC 59 6678214 6679994 AGAATCTCCATGCGACTCAG 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299539 1 1 3 81 2L 7227156 7227174 TCCTGGACGACATAATGCC 59 7225846 7227111 TGATGATTGTCCTCAGCGT 59 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 3 4 4 80 2L 7403302 7403320 TGAGAAACAAGTGGCACCT 59 7403358 7403562 GGACTTTCAGAAATTAGATACCCAG 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 1 2 3 80 2L 7805106 7805127 GACAAGCTGAATCAGATCAAGG 59 7804903 7805066 CGATTCCTGTTCGCTATTGC 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 2 2 3 128 2L 7805160 7805178 GTCAGGATGACACAAACGG 58 7804906 7805068 TTCCTGTTCGCTATTGCTG 58 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 2 2 2 81 2L 7988312 7988401 GGGTATTACCTTGTATGAGAATGTC 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0273381 1 2 4 91 2L 8250676 8252240 TTCCAGATACCAGCTCCTG 58 8250603 8250621 TGTTCATGGTGCTTGATGC 59 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 1 2 3 129 2L 8482614 8482632 GGGACTATTACCGCGATCC 59 8482724 8483142 GATGAAGATGCATGGATCGG 59 NA Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 1 2 2 91 2L 8996807 8996825 CCTACATCAAGAGTGCCGT 59 8996671 8996755 CAGTGCCATATTCTTCGATGTG 59 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 3 3 3 80 2L 9338453 9338473 TTTGGTCTCATCAATCACCAG 58 9338513 9338599 TAAGTAATGGCTCTGGTAGCA 58 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079898 1 1 2 103 2L 9924571 9924644 CGATTGGAATTCAAGAACATCC 58 9924489 9924507 AGGTGCTCAATCACTTCGA 59 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 2 2 2 87 2L 10365120 10365138 GGTCTATCCCGAAGAACCT 58 10365188 10365281 GGCTTCAACGACATTTACTC 57 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 1 4 4 200 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965647 10965665 GTTGTAGTACTCCAGGGCG 59 NA Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 3 1 1 69 2L 12453009 12453027 TCGATTATTGGAAAGGCGT 57 12452856 12452875 CCATGTCCGAGTTACAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 3 1 8 77 2L 12460593 12460611 ATGTGATGGTGCCTAATGC 58 12458169 12458187 TTAGCACTTCCACCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 1 2 17 112 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727109 12729195 GTACGAGGTAACTTGGCCA 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 1 2 17 97 2L 12736249 12737970 CATTTCAGGTTCTGGCTACC 58 12738030 12738048 CTGGGCGAAGTAGTACAGG 59 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 3 3 3 247 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976948 GAGTACTTGGACAGAGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476 3 1 2 76 2L 13310254 13310803 ATGTTCAACGTTCAGACGTC 58 13310197 13310215 TCCGTATCCTTTGTGTCCT 58 NA DesignRelaxed Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514,FBtr0080513 2 2 2 80 2L 13535021 13546923 GTCCCTCTTAAAGGCTGCA 59 13534959 13534978 CTTCGAATGAGCTTCGTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627 3 1 3 125 2L 14357270 14357357 ATGTCCCAACATGACTGCA 59 14357444 14357529 TTGGCCATGAATTTCTTCTCG 59 NA Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080714 1 1 2 118 2L 15246262 15246280 ACCAGGTGTGAACGTAGTC 59 15241510 15246180 AATGATCCCGGACTTCGAC 59 NA Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080804,FBtr0080803 1 2 3 94 2L 16044331 16044351 GATCGACAGAAATTGGAACAG 57 16044465 16044801 GTAGTGTTCATGATGTCATGGA 58 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090006,FBtr0090004,FBtr0090005 1 3 4 80 2L 16186144 16189035 TAACAATGTCTACGCACCC 57 16189079 16189097 TGATCGTAGGGACTAGCTG 58 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 3 3 4 80 2L 17417620 17417639 TGAAACTAGTGAGACCCTCG 58 17415377 17417579 TGGTTAGGAGTTCTGGATTCG 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 2 2 4 156 2L 18474947 18475164 TGCAGGATAGGATGAATTCCA 59 18474491 18474509 TTACCGTTTCCATTGGCAG 58 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 3 2 4 156 2L 18474947 18475163 GCAGGATAGGATGAATTCCA 57 18474490 18474508 ATTACCGTTTCCATTGGCA 57 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 3 2 4 156 2L 18474947 18475163 GCAGGATAGGATGAATTCCA 57 18474490 18474508 ATTACCGTTTCCATTGGCA 57 NA Drosophila melanogaster 61 CG10570 FBgn0040992 FBtr0081122 3 1 1 265 2L 18810844 18810862 ATTAGCCACACGGATTCCA 59 18810463 18810481 GTACGTTCGGTGTAGACCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 2 2 4 80 2L 19388086 19388105 CGATCCGTATCTATTCCACC 57 19387922 19388045 AGACCAGTTATAGCTTGTTGG 57 NA Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 2 2 2 100 2L 19506352 19507499 AGCACTGGAGGTATTTCGAC 59 19506271 19506289 CTGATGATCTCCGTTGCCA 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081353,FBtr0081352,FBtr0301884 3 4 5 90 2L 20346164 20346182 ACTCGGTTCTCGTTCTTCG 59 20346233 20346317 GAATTCGCATCTTGGTATAGCA 59 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 2 3 3 102 2L 20687063 20687265 CTAACCCTGATCACAGAACG 58 20686980 20686998 CATTGTAGGTGACGTGGTC 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 3 7 7 80 2L 21118119 21119756 AACATAGCTACCATCGGTGG 59 21119799 21119817 CATTAGACCCGGAGTCTCG 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085914,FBtr0085915 2 3 5 88 2L 21671385 21672303 CTAAGTCGCAAGAACATGTCC 59 21671317 21671335 TCGTTGAAGCTTCCCTCTG 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 2 5 11 142 2R 2764834 2764852 ATGTTCTCCGATCAGGCTG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 1 3 3 80 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922201 TAGAATCTTATGCGGTCGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111088 1 1 59 90 2R 3236476 3242809 GTTCCTGCATTCAGATGGT 57 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 3 5 5 80 2R 3371062 3371165 ACTTTATGTGGGATATCGAGGT 58 3371003 3371021 CGCAAGTGCGATCTTTCTC 59 NA Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 3 3 3 82 2R 3490154 3490639 TTTGGATAAAGTGGGTCTTCG 58 3490092 3490110 CCGAGAAGACCTTGATCCA 58 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 3 2 5 92 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575720 3575738 TTATCGCCTTTCGTCTCCA 58 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 3 4 4 85 2R 3806268 3806288 GCGGCTTTAATTCAAAGAACG 59 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 2 4 4 119 2R 4642430 4644855 GAACCAAAGACTATCGATATCTCG 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643 1 1 2 161 2R 4782942 4782961 GAGCTTAATCCCAAGGAGGA 58 4783143 4783467 ATCTTGCGTCTGATGGGTC 59 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0300599 1 1 3 92 2R 4844578 4844596 AGTTAAATTCGGAAGCGGG 58 4844650 4846620 GCACATAATCTGGTAGGACAC 58 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 3 2 2 82 2R 5046965 5047046 TTGTATTCGATGGAGTGATGAC 58 5046904 5046922 AAAGAATGTGTAGTCCCGC 57 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 2 1 1 61 2R 5341141 5341160 CTACTCGTGTCCCTTCAAGG 59 5341048 5341070 CCAACTCGAAGTCTTTACATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 1 4 5 110 2R 5423496 5423514 GAGTTGGAGAAGGTCAGGG 59 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 1 1 1 129 2R 5733917 5733936 GCACGACTGGAATTTCAGTC 59 5733751 5733769 CAGGAGGCGTACTAGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088446 2 2 5 193 2R 5806555 5806959 GGATTCAGTTTATCCATCGGG 58 5806267 5806285 CAATTGTGGGCGGTATGAC 59 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 1 2 2 65 2R 5937120 5937138 TTTAGCGGACATGGTGGAG 59 5937275 5937293 GATGCGGTACTTGTTCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 3 4 4 80 2R 7101697 7101781 AAGTAGTGATACGGATGAGTCC 59 7101821 7101840 GGCGTCATTGATAACGAGAG 58 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 2 2 2 80 2R 8256396 8256470 TATGATACAGAGGCTCACTCTG 59 8256510 8256529 TGACTCCGTGTAGTAAACGA 58 NA Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0087917,FBtr0087916 2 2 3 89 2R 8276583 8276769 CGATCACTCTTACCTGACTG 57 8276821 8276839 TAGAATCCCTTGGCATGTG 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 3 3 6 80 2R 8766204 8766564 ATACCAAGATCCCAACCAGC 59 8766143 8766161 CCCTGAGGTGGATATCCAC 59 NA Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 2 2 2 64 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108846 9108865 CGGATACTGTGGGATAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 1 3 12 104 2R 9310221 9323716 AGTACGAAGATGACGAGGA 57 9310135 9310153 TACCGTACTTAGTGGGCTG 58 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 3 5 5 82 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436390 9436472 ATACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 1 3 15 80 2R 9770046 9788956 GCATACGAACTAGATCAAGCAG 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 2 10 15 150 2R 9752989 9753575 AACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795 2 1 8 88 2R 10067359 10067377 GCCTTCTTCCAGAAGAACC 58 10067429 10067937 GGTACAACAAGCTGTTGCT 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 1 2 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10181606 CTGCAGAATATAGACCTCCTCC 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429 1 1 5 101 2R 10798872 10799523 ATTCCGCAAGAAACTCGTC 58 10798789 10798807 GTGGTAGCCATAGGGACAG 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 2 4 4 110 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026097 11026115 CTGGATTACATTGGCCTGG 58 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087402 1 1 2 80 2R 11098561 11099089 CAAGAAACCTATCAACGATGC 57 11098501 11098522 GATGATGCTATATCACGATCCT 57 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 2 4 6 80 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152254 11152334 TACACCAATCTCGAATCCCT 58 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 3 5 5 81 2R 11211644 11211716 TGCCTGATGCAATGAAACC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 2 5 5 80 2R 11211582 11211605 GATAATTAACGATAGGGAGATGCG 59 11211644 11211716 GGTTTCATTGCATCAGGCA 59 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 3 2 2 95 2R 11743552 11743576 CTATAACGCCTTAAAGGATAAGGTG 59 11743629 11743964 CCATATCCACCGCAAAGTG 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 3 2 5 131 2R 11825287 11825306 TAACTACGTGAGCTCTCGTC 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275 1 1 13 96 2R 11838958 11839860 TGTCACAGTTGGAGTCTTATCC 59 11838883 11838902 TTCACCTGCAGACAGATCTC 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 3 2 13 125 2R 11850639 11850658 AATACACTCTACGGGTCAGG 58 11848685 11850554 AATATGTGTCTTTGATGCCCAC 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 3 2 5 116 2R 12220627 12220645 ACTGGACACCTATGTGGAG 58 12214656 12220547 GGTAGTTCGGTGTTGTTGG 58 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 1 2 5 80 2R 12566523 12566544 ATCTGGACAACATTTATCCCGA 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 1 2 3 127 2R 12922402 12922422 GGAGAAACTAAATCTGGAGCG 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 1 2 2 80 2R 12976444 12976523 CAGTTTCCATCTGGTATCCAC 58 12976384 12976405 CACATCGGCAATGAATTTATCC 58 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982 3 1 2 86 2R 12996708 12996726 ACCACTCTACCGAAATCCC 58 12996776 12997460 CAATGAGATGCCGCTATCG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0301482 2 1 7 144 2R 13163434 13163452 CTGCAATTGGAGGTCTGTC 58 13163557 13193501 TGAAACTTACCTTGATGCTGTC 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110965,FBtr0086782 1 2 4 114 2R 14019049 14019067 AAGCATCTGAGGAAGAGGG 58 14018881 14018971 TGGAGTTCGTCAACTGAGG 59 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 2 5 5 81 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042923 14042942 TTAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 3 6 6 131 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175122 14175141 CAATATTCCACTCGTCCTCG 58 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086509 3 2 4 109 2R 15129990 15130008 ATCAGAGGAGGGATAGCGT 59 15130078 15130217 CGGAGATTTCTGGTTATCTGTG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 2 5 19 97 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361463 15362042 CGATCCACTGTTTGTCTCTG 58 NA Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 2 2 2 83 2R 16518245 16518263 AACGATCGCATTATGGAGC 58 16517762 16518201 ATAGACGATCAGCAATAGAACC 57 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 1 6 6 80 2R 17299851 17299874 CCCATGATGAAATCTATATCGACG 59 17286797 17299818 CTTTCTCTAGATCTTCGTGTATACC 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 2 2 6 126 2R 17286779 17286797 GATCCGGACTATTCTGGCT 58 17286080 17286690 TATGAGCTGTGTTTATGCCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 3 2 2 80 2R 17542999 17543106 CTACTCTTGCTCACTGCTC 57 17543150 17543168 TCATCCTGACTCATCGAGG 58 NA Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 2 2 2 285 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556708 17556726 TTCCATGCCTTAGCTTAGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992 1 1 2 80 2R 17557311 17557331 AGGATTACATGTCTGACACTC 57 17557190 17557270 AGTGATTCTTGGTCAGACAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 px FBgn0003175 FBtr0071838 3 1 3 92 2R 18428476 18442734 AATGTCCACCAGGCATCTC 59 18428402 18428421 AACGAAAGTGGTTCTTTCGG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 2 8 13 141 2R 18813126 18814633 GGCTTATAATATTGTTCTGCGG 57 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 CG9812 FBgn0034860 FBtr0072025 2 1 2 91 2R 19300648 19302029 CAACCAAGATGCAAGGAGC 59 19300575 19300593 CCAGGAAGCGATTGTTCAC 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 2 4 4 60 2R 19487892 19487970 TCCTGCTAAACGTCAATTCAC 59 19487852 19487870 GTTAAGTTCCTCGCCTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135 1 1 2 137 2R 19791716 19791736 GGATGGATCCAAAGTTGTTCG 59 19791898 19791968 AAAGTTTGTGTACAGCCGC 59 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0072252 1 1 2 109 2R 20007770 20008247 GCGATTGGGATATCTTAACCA 58 20008318 20008336 GAACATGCTCGTAGGAAGG 58 NA Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 1 2 2 80 2R 20013301 20013373 CAAAGTCGGCTTCTGTCAC 59 20013239 20013262 TTTCCAGTCTTGTAGACATAGGAG 59 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 1 2 2 154 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044543 20044566 CCTCATAAGTCCATTTAGGAACAC 59 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 3 4 4 91 2R 20419982 20420000 AATCCGAAACCATGTCCGA 59 20420052 20420129 TTGTCGTATGAAGTTGATGAGG 58 NA InUTR Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179 1 1 3 135 2R 20960904 20960922 TACCCGAACGATCTCAGAG 58 20960724 20960805 GCACTAAGAAGTTGCTGCT 58 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 3 3 4 89 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510695 10510715 ATAAACAGAAAGTGGCACAGG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 3 9 9 80 3L 142813 142833 CTGCTTAGTGCAGAATTAGGC 59 142873 142956 CAGGTCGAAAGAGTTCTTTGC 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 1 5 6 81 3L 352342 352363 TATCTCGAGTTATCCGAAAGGG 59 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072572 2 1 2 80 3L 335163 335256 CGAGAAGGACAAATTCGGC 59 335101 335121 AAGTACGAGATAAGCTCCGTG 59 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 2 2 6 98 3L 1024534 1024552 ACTAAGTTTGCCGTGTGGA 59 1024396 1024474 CTTAACCCAAATCTGCTTGGT 58 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716 2 1 4 106 3L 1346437 1424798 TGTGGAAGGAAATTTGTGAGAC 59 1346352 1346370 ATCCCGATAGCGATTCAGG 59 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301789 1 1 2 132 3L 1434778 1434796 GATACTCGTCATGCAGCTG 58 1433358 1434682 GTTGTTGCTCTACGCACTC 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072704 1 1 3 112 3L 1525382 1525649 CTGCAAAGCATCAATGTGC 58 1525288 1525306 TCGTCCTGATCATCTCTGG 58 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 3 4 4 112 3L 1551788 1551869 GCTATGTGGACGAGATCGT 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 2 2 2 80 3L 1557836 1557854 AGAAGCAGCCTCAATCCTC 59 1557700 1557795 TGTTGGTATGTAACTCACTGGA 59 NA Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813,FBtr0072814 1 2 2 94 3L 1639044 1639062 CGTCTTCAAGCACAATGCT 59 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 3 2 2 81 3L 1873975 1874052 TGTCAAGGAAGTTACATACCG 57 1873914 1873933 AGCATTGTTTAGATTTGCGG 57 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 3 4 4 80 3L 2498023 2498107 GGAAGATGTGAAGATAAACACCG 59 2498144 2498165 TCTGAGATCCAGCGATTTACTC 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 2 4 4 80 3L 2499740 2499761 TCAGCCTCATCACAAATAAGTG 58 2499614 2499699 CAGCCATAACCTCATCGTG 58 NA Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 1 2 2 87 3L 2784494 2785006 TGCACAAGAACTACAAGCG 58 2785057 2785075 CTCTCGTACAGACCGTCTC 59 NA Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 1 2 2 80 3L 3202191 3209298 TGAGGAATAGTGTATTCCTCACC 59 3209335 3209356 CACCCACGTCTATTTGAATCTG 59 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 2 5 5 66 3L 3300762 3300780 TAGTACCACCGATCTGGAC 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 2 6 13 129 3L 3578466 3593333 ATTGCAGATATGGAGACTGG 57 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 3 4 13 89 3L 3516817 3552793 ATGCTAAAGATGGCGTCAC 58 3552846 3552864 TTAATCTGCCGAAGCTGTG 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073187 3 3 5 97 3L 3780490 3780509 TATCGGATATCCTGCACAGC 59 3769396 3780430 CTGTTTCTTAGCGCACTGC 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 1 3 6 94 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095864 4095983 TGGTAGTATTCCTTCATCGAGTG 59 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 1 3 3 62 3L 4262983 4263002 AAATGAATCCCTTGATCGGG 58 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 2 2 2 95 3L 4538173 4538264 TATGTGAAATATCCCAAGGTGG 58 4538320 4538338 GAACTTGATGCTCAGTCCG 58 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599 3 1 5 121 3L 5160148 5161351 ATGTAAAGGTTACGGCTTCG 58 5160046 5160065 TATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301110 2 1 11 160 3L 7012989 7043673 TAGGATTCAGCTACGCGTG 59 7044342 7044361 TGGTGTCCAGATTCTGTACC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 2 2 11 136 3L 7042665 7043671 GAATACGAAACGCTACGCG 59 7043770 7043789 GAGAGGAATGCCTTGAAGGT 59 NA Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 2 2 2 70 3L 7125770 7126229 TTTCCGAGCAATTCAACGC 59 7126263 7126281 GAACTCGTCATCACTGGGA 59 NA DesignRelaxed Drosophila melanogaster 61 smid FBgn0016983 FBtr0301611 1 1 3 145 3L 7375821 7375896 TGCAAAGAAAGCTAAACCGA 58 7376062 7376080 ATAAGCCAGGCACATTACG 58 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0300412,FBtr0076768 1 3 4 85 3L 7925159 7925177 CAGGACAACGAGGAGAGTG 59 7924340 7924863 TTGTCGTTAGCTGAGGACG 59 NA Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 1 1 1 60 3L 8322362 8322383 GCCAAAGTGAGAAACTATTTCG 58 8322453 8322473 AGCCAAAGGAATATGTGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 2 2 4 80 3L 8463411 8463433 AATATGCTTATACCTAGGGAGCC 59 8463470 8463542 GGCCTGTAAATACTGTAGTTGG 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 3 2 5 81 3L 8574886 8574904 GCAAATAGGGCAATTCCCA 58 8574949 8579082 CAGGTAGCGACACAATCAC 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 3 3 13 166 3L 8627806 8627827 CATGACAGTATCATGAAGCAGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 1 4 7 80 3L 8904059 8904130 CGTTTAATGGAACTCCTTCTCTG 59 8904001 8904023 GACGACCAACATAGATCATAGGA 59 NA Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076563,FBtr0076561,FBtr0076562 3 3 4 111 3L 8942372 8942767 GTTACCAAAGGCCAACAGTG 59 8942280 8942298 AGTTCCTGACGATGTAGGC 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 1 5 5 81 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986078 8986097 GCGGTTGTTAATCCTATCGT 58 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 2 3 3 64 3L 9127983 9128098 ACAATTATTGGGTTGGCAGC 59 9128125 9128143 CACCACAATGCTAACGTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076398,FBtr0076399 2 2 4 164 3L 9707710 9708851 TTTGTGCGAAGAAGTGACC 58 9708979 9708997 GATGTGGTAATTGGTGGCG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 1 4 12 113 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 3 3 3 82 3L 9889481 9889564 ATGAGGCTACTCCCATTCG 59 9889417 9889438 GCTCTTGCAGATTAACAAACAG 58 NA Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300239,FBtr0300238,FBtr0300237 1 3 3 60 3L 9966061 9966082 ATTAGCCTCTGTTAGTATCGTC 57 9966195 9966213 CTTCCAGATGAGGAACCAG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113418 2 1 5 111 3L 10580988 10581771 ATATTAAATCGCCGCACTGTG 59 10582468 10582486 ACAGCGGAGTCTTTAGCAG 59 NA Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 2 2 2 61 3L 10618128 10618146 GCTATTGAGGCACTGACCA 59 10618024 10618103 AAGCCAAACTCAATTGCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14149 FBgn0036105 FBtr0076269 2 1 1 77 3L 10872394 10872413 TTGAGACTTTGTTGGCTTCG 59 10872503 10872525 TGAAACCTAGTATAGAGCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 1 3 5 133 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005708 12005727 GATTGCTCACGTTCTTCCTC 59 NA Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 1 1 1 127 3L 12185119 12185137 CTTCACCGAAAGTATGGCA 57 12185284 12185302 AAGTCATCTCCGTGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 3 2 2 87 3L 12366174 12366252 GAAGGTCTTCCAGGCTCTG 59 12366105 12366125 AACTGGCTCATTATTCTTGCC 59 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 3 2 2 106 3L 12698329 12698348 GATCTGAAGGAGAACCTGGT 58 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913 2 1 2 138 3L 12731791 12731877 GAGATTCTTTGAGCAGGGC 58 12731978 12731997 TTATGTCGGTTCTTGTAGGC 57 NA Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942 2 1 3 94 3L 12820676 12824994 TCCACACCACATGATCAGG 59 12820600 12820618 AATGCGGCCACATATTGTG 59 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 1 2 3 82 3L 12838945 12840159 ATTAGCCACGGAACTTCGA 59 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 flr FBgn0260049 FBtr0075845,FBtr0075846 2 2 2 108 3L 13407233 13407440 TATATTGCATCTGGTGACGC 58 13407511 13407529 TATCCTTGATGGGTCCTGC 58 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239 1 2 3 94 3L 14619987 14620132 ATCGATAGAAATCTCACGCGT 59 14620188 14620206 ATATCACCGTGTAGGTGGC 59 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 2 2 2 65 3L 14786346 14786364 GTGATCATGAGCGATGAGG 58 14786871 14786889 GTCCAGTGTATAACCACGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 1 2 2 194 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113865 15113883 GAACTCATTGGGTCCACAG 58 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0301510,FBtr0100036 3 4 5 191 3L 15862984 15863002 TTTGTTATCTGACCACCGC 58 15861149 15861670 AGTCTTCATCATTTACAGGCG 58 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301472 1 1 7 107 3L 16059405 16059725 CTTCTTCAAATCCTTTGTGCCA 59 16059793 16059811 GTGACACCTTGGGTAGACC 59 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414 1 1 2 109 3L 16390124 16390142 GAAGACTGTGAAGCTGCAG 58 16389676 16390054 TAGCAATGATAATTTGCTGGGC 59 NA Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653 2 1 2 122 3L 16496621 16497432 ATCACATCCAGGTGACACAG 59 16496518 16496537 TGCCCTTGAGAAAGTAGGTG 59 NA Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 2 2 2 80 3L 16557864 16557888 CTGAGTACTACAAGTTTCATCAGTC 59 16557738 16557828 TGTAAAGGAAACCCAATCGAG 58 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 1 2 2 80 3L 16572285 16572303 GGGATATACGGCCCTTGAC 59 16572171 16572244 CGGCTGACTTAATCTTGTTACC 59 NA Drosophila melanogaster 61 tra FBgn0003741 FBtr0100244 2 1 2 68 3L 16584019 16584111 GCATCGAGTGTCATATTGTG 57 16583970 16583988 TTTCTCTGTCTGGTCGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364 2 1 2 115 3L 16583851 16584117 AACCCAGCATCGAGATTCC 59 16583754 16583774 CAAAGTACGGAATCTTGTGCT 59 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 2 3 3 80 3L 16665633 16666164 GACGGAGGCATTATTCTGGA 59 16665572 16665590 GGCAATGGGAATGTCATCG 59 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 3 4 4 96 3L 16784161 16784181 GCAGACGATAATGTAACCGTC 59 16784030 16784104 CCTCTCCATATTTGCATGCA 58 NA Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 2 4 4 96 3L 16784162 16784181 GCAGACGATAATGTAACCGT 58 16784030 16784104 CCTCTCCATATTTGCATGCA 58 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175 2 1 10 93 3L 16926458 16928310 AAATGCGCTTTCTTGTTCTC 57 16926162 16926402 TTAGCTTCTAGTTGGGCCA 58 NA InUTR Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 3 7 7 81 3L 17537429 17537447 GTTCGGTAACGAAGACCGA 59 17537491 17537573 AGGCCTCCATAATCTAAGCC 59 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 2 4 4 80 3L 18823421 18823439 TTGTGATGTACTTCACCCG 57 18823041 18823379 TAGAGTTACGAATGTCCTTGG 57 NA Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 1 2 2 291 3L 19103337 19103355 GAGATTCAACCACCTGCAC 58 19101362 19101380 GTTCAGACTCAGGTTGGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 3 2 2 292 3L 19103338 19103356 AGAGATTCAACCACCTGCA 59 19101362 19101380 GTTCAGACTCAGGTTGGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 2 2 2 60 3L 19612347 19612365 GTTCGAACTCACGTTCGAG 59 19612386 19612407 GATCATCTTCCACTCTAGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 2 6 6 91 3L 19853428 19853510 AGACAGCATGGAGATCCTG 58 19853565 19853583 ACTCATCCTTCCTCTTGGG 58 NA Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 2 2 2 80 3L 20005285 20005305 GAACTCCAAGATCACGTACTC 58 20005344 20005423 GAAGTTATTGAACCTTGGTCGT 59 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 1 2 2 116 3L 21189472 21189552 CAATAGAGCAATGTGACTTGGG 59 21189377 21189395 TAAGCGAAGGTTCCTCCTC 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297 1 1 4 99 3L 21196403 21196421 TGCGTATGCTAATGTTGGC 59 21198838 21198856 GATCATGAAACGACGCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0273421 2 1 3 97 3L 21521991 21522072 CTTTAAGGTGACGAGGTTTCG 59 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 2 1 1 72 3L 21628820 21628838 GTACAGATGACCACAACGC 59 21629089 21629109 TGTACAGACAGGTAAGTAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 1 2 2 102 3R 67637 67713 ACATCCATATACGAGGCGC 59 67553 67571 CTTGCTCAATCCGAAGCAG 59 NA InUTR Drosophila melanogaster 61 cpx FBgn0041605 FBtr0301772,FBtr0300789,FBtr0301768 2 3 21 165 3R 110120 113803 CCGTTAAAGATGCTGCAGG 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 10 10 92 3R 561271 561375 CGATCTGCATGTGAAATACGA 59 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089952 1 1 10 106 3R 571642 571660 ATCCATCTCGAACCCACTC 58 570378 571572 ACGGACTCAGTTGGTTCAG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 135 3R 1119084 1119798 GAAAGTATTCTCAAGACGTTCCTC 59 1118972 1118990 GTCCATGGAGACCATGGAG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078812 1 1 19 117 3R 1118452 1118470 GATTCAAGAGGACACCGAG 57 1117793 1118373 CTTTATAAGCTCCCAGGACTC 57 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0078755 2 1 4 95 3R 1385908 1386509 GAGGAACCTCTATGACCCG 59 1385831 1385849 CTACCCTGGTAAATGCGCT 59 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600 2 1 2 114 3R 2091005 2091026 GCCAAGTAACAAACTATTGGCA 59 2091101 2091997 AAACACAAAGCAGTCCACC 58 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 1 2 2 80 3R 2192121 2192140 CGAGGTTATCAAGATACGCA 57 2192000 2192081 GACTTGGAAATCATTCGAACTC 57 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0110774 3 1 2 179 3R 2199092 2199191 AATATCAAAGCCCAACGTCTG 59 2198868 2198886 GAATGGTCTTCTGGACGGT 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 1 5 5 84 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216739 2216757 TTCGTGTAGTTGTCCAGCT 59 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 1 2 2 116 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625606 3625624 CAGGAAACTTGGGCAAGTG 59 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0081773 2 1 2 84 3R 3627696 3627715 AATCCGGTTTACAACAGTGG 58 3627567 3627650 CATATACGGCATTGACTCGC 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 3 5 5 94 3R 3697633 3697747 AGTCAATTTGTTGGAGCGA 57 3697557 3697578 GATCCTATAATAAACTCGTGCG 57 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 3 3 5 180 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691469 3694094 ACTCATGTAGAGTAGCCGC 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 1 4 8 80 3R 4660661 4661007 CCATATACGGTACCCTACGA 57 4660600 4660618 GATGCTGTACTTGCTGGAG 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 3 4 8 80 3R 4661229 4664128 ATGTCCGAGTCTAAGCCAG 58 4661167 4661185 TGATGCATACGAGAGTCGG 59 NA Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 2 3 3 96 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064805 5064823 GTTCAGGTTGACGGATCCA 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 3 2 2 81 3R 5081306 5081390 GGCAGATATCTAGAGCTTCGT 59 5081433 5081451 TAAGACCCACGGATAGTGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 3 2 2 70 3R 5341136 5341154 AGTCTTCCCTAGTCCGGAG 59 5341033 5341051 CCCTCACTACTGTCTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 PpD3 FBgn0005777 FBtr0082129,FBtr0082128 1 2 2 80 3R 5575745 5575767 TAAGGATATGGGCTATGAAGTGG 59 5575803 5575881 CCCATAGTATCACAATAGTTCGG 58 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 3 5 9 80 3R 5835091 5835469 AACAAAGAGTCGTGCATCG 58 5835029 5835047 CGTAGATCGTACCCAGGTG 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 3 2 6 171 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930491 5930509 TCTTCTCCTGACGCAACTG 59 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082604 2 1 2 127 3R 8218279 8218552 AAAGTGACCATTGCGAAGC 59 8218070 8218188 TTACCGAATACCGGATCCT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 1 2 6 152 3R 8522011 8522183 TAGTCATGCAGGTCCTGTC 58 8522297 8522317 TGAACAGATTGATCATGGTCG 58 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 3 2 2 82 3R 9093474 9093560 GATATGAGCGTTCGATCCGA 59 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 136 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210484 9210502 TTAACTCGATGTGCACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 1 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257205 GGATGGATCTTTGACAATGGAC 59 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 3 5 5 80 3R 10090933 10090954 ATAACCTTGTAGTTGATGCCAC 58 10090814 10090892 TCGAATAGCAATTCGGCTC 58 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 2 3 3 91 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551642 10551772 CAGATGTTGATCGTCTCATTGG 59 NA Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 1 2 2 93 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571992 10572010 ATCCAAATTGGGACCTCCA 58 NA Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 3 2 2 95 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571990 10572010 ATATCCAAATTGGGACCTCCA 59 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 3 3 3 84 3R 10970037 10970055 GAGTTCCAGAACTTGCACG 59 10969532 10969990 AATCAAAGTCAATGTGGCCG 59 NA Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 1 1 1 106 3R 11165413 11165431 TCTGGGATTGAGCCTTAGC 59 11165232 11165250 TGGACACGGCATAGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 2 3 3 91 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616531 11616550 GTGTAGCTTCTCACTGTTGC 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 4 5 194 3R 11723421 11723504 AGCTAAGTGGAAATGCTCG 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 3 2 2 87 3R 11789811 11789897 AAAGAAGAGATCCGCAAAGC 59 11789947 11789965 CTCATAGCTCCAGTGTCCG 59 NA Nonspecific Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 2 2 2 104 3R 11790730 11790804 TCACTAAAGGTAGAGGAGCTG 58 11790646 11790665 CGACAGATCTATGTGGAGGG 59 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083215,FBtr0100595 2 2 3 191 3R 11827112 11827475 CCAATTCGAGACGCTTGAG 59 11827630 11827901 GCTTGCGTTTCTGAATGGT 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 1 2 9 80 3R 12121525 12122390 CTGATAGCTATACAATTACTCCACC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 1 1 1 67 3R 12149301 12149322 CTTTACCCGCATCAATAAACAG 58 12149408 12149428 TGCCACCATAGATGAATAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 3 2 2 147 3R 12307053 12307121 GGCGCATTAAATCTGAGCT 58 12307232 12307250 ACTATGTTCAGCCGATCGG 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083350 2 1 6 108 3R 12536328 12558458 TGGCTATCGCAGGTAAGAG 59 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 2 2 2 81 3R 12805119 12805208 TCCTGGACAGTCTGAAACG 59 12805056 12805074 TTTCCCACATCACCGTACC 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 3 5 5 87 3R 12920387 12920405 TCTCGGTGAAGTACGATCC 58 12920255 12920336 TTGAAGGGAGATCCTTGCA 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 3 3 4 80 3R 13302771 13303278 CATCATAACGATAGCTCTGACC 58 13302712 13302730 AAGGTCCTGGATTCGTAGC 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 3 2 2 91 3R 13991871 13992084 TGGTGAAAGTAGGAGACTCC 58 13991799 13991817 CTTGCCATTGACGAGATCG 59 NA Nonspecific Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 2 5 5 84 3R 14585654 14585785 CCTGAAAGATCCGGACTGG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 2 2 4 125 3R 14844196 14846660 GGTGAAGAAGGGTATCAACG 58 14846748 14846766 CAGTGTCCAATAGATGGGC 58 NA Drosophila melanogaster 61 bnl FBgn0014135 FBtr0083795 3 1 2 81 3R 15621986 15622004 CGAGGACTCAAGTTCCGAG 59 15620046 15621941 CTGCAGACACAGGAAATCG 58 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083856 3 1 2 146 3R 15727518 15728567 AAAGGGTAAGTGCTCTGGTC 59 15727391 15727409 GGCTCCAGTCTCATCAGTC 59 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0301700 2 1 3 85 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873440 15873529 CAAATCCACCTCCCAACAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255 2 1 8 165 3R 16623566 16624022 GGATCGTGGGATTTGAAACC 59 16625757 16625775 CGATAGTCCGAGAAACCGA 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 2 9 9 157 3R 16791620 16791641 GAAATTGATCATTGTCGAGGGT 59 16791759 16792135 AAATCATGTCAGCAGCCTG 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 1 2 9 80 3R 16794198 16798905 GTCAACGAAAGGTTGATTTCGA 59 16798944 16798964 GACGAAGTACACAAAGAAGCC 59 NA Drosophila melanogaster 61 Obp93a FBgn0038859 FBtr0084030,FBtr0084031 3 2 2 82 3R 16955074 16955160 CTTTGCATGCATGTATTGCG 59 16955011 16955032 CAATGCCTGGGTATTAACAGTG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084065 2 1 22 183 3R 17200938 17200956 GACGACAGCTACTTCACTG 58 17178951 17200791 CCAGAACAACTTGAGCCTC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 1 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 3 4 4 86 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404213 17404292 GGCTGTCGAACTGATAATAGC 59 NA Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 3 2 2 69 3R 18313056 18313074 TCGACCTGACCAAGTTGAG 59 18313107 18313242 TTGGTAATCTCCTGCTCGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 2 5 5 80 3R 18430300 18430377 AGCAGCTTTAAGAAGACTCC 57 18430418 18430438 CAAATACAGCACAAGATCACG 58 NA Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 1 2 2 80 3R 18881442 18881527 GATGCGAACAAAGAGATTGTG 58 18881382 18881402 GATGGAGGTGTAGATCAAAGC 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392 3 1 7 125 3R 19035345 19035363 GTTGAAAGCTCTGGAGGAG 57 19023686 19035071 CGTATGTATTCACCAGTTTCG 57 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0084388 3 1 2 80 3R 19076365 19076386 CATCTCTAACAACCACAACCAG 59 19076247 19076325 TGTGCTCATTGTTCTGACCT 59 NA Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 2 1 1 61 3R 19228919 19228938 TCAGCTACTTAAGGTCGTGG 59 19229509 19229530 AGCTGTAGACAATCAAAGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 3 3 3 84 3R 19349551 19349633 CTGTTCATAAGAAGACTTCGCA 58 19349488 19349506 TCAAATCTTGCGGAACCAG 58 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 3 2 3 104 3R 19350705 19351229 AGATCTCTGCGGAAAGAGC 59 19350619 19350638 ACTATAGTAGCCTCCTCGCT 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 1 4 6 91 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 2 4 4 101 3R 20173011 20173134 CAACAAAGCCATCACAGCT 59 20172928 20172946 ATTGTATCCCTGCTGGGTG 59 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084667 1 2 3 80 3R 20475259 20475375 CTGGAGCTCTATGAGGTGC 59 20475197 20475215 GAAGGTGGTCTCGATCTCG 59 NA Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 1 1 2 124 3R 20483308 20483328 TATAGTTCCGCTACCGAAACC 59 20484125 20484230 TCGGCTTTATATTGCCGGT 59 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 3 1 1 102 3R 20628358 20628376 CGGCTTGATGTTTACCAGG 58 20628216 20628234 TTTGCAACTCGATGGAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084700 1 1 3 80 3R 20644399 20644419 ATCCGGTGATAAGAAGGACTC 59 20644560 20645460 GTCGATTTCTCTTTATCGTCCT 58 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 2 3 3 80 3R 20700373 20700446 CAGGATACAATTCTGGGCTG 58 20700312 20700330 GACAAATCTGCGGATCCAG 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 2 5 5 104 3R 21507674 21507692 CATGACCAATCTGTACGGC 58 21507760 21507837 AAGATGGCGTAATGGTCAC 57 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 1 3 5 197 3R 21507903 21507921 TGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113384,FBtr0084928,FBtr0084927 1 3 7 83 3R 21532065 21532083 GGAGTCCTCGCATATCCTG 59 21527375 21532020 TTGTTTCAAGATCTTCGACGC 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 3 3 7 94 3R 21575099 21577791 CTATAAATGAGGCCACTTGCTC 59 21575026 21575044 ACAATCGCTCTCCTGATCG 59 NA Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 1 2 2 82 3R 21882158 21882176 AAATCGATGTCAGCGATGG 58 21882034 21882112 TTCCAGAACCTTCTGAGCT 58 NA Nonspecific Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 2 3 3 81 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905449 21907623 CCAAGACAACCTTCTGATCG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 2 2 9 84 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699706 22699793 TGTAGCCCGTATATGCTACG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 1 2 12 95 3R 22892108 22892127 CTAAAGAGCACAATCCCTGC 59 22891942 22892050 ATCGCTCGTCTGAAAGGTC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085143 2 2 12 96 3R 22892108 22892127 CTAAAGAGCACAATCCCTGC 59 22891941 22892049 AATCGCTCGTCTGAAAGGT 59 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 2 1 1 79 3R 23314692 23314710 ATACTGGCTCTACCTCAGC 58 23314820 23314838 GTTTGATGCACTCAACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 3 3 3 109 3R 24168518 24168607 ACGAGATACCAGAGGTATCG 58 24168679 24168697 ATCTTTGCCTCGATCACGA 59 NA InUTR Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 1 9 10 184 3R 24957540 24957858 TCCGAGATCTCAATCCCGA 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 3 2 2 80 3R 24989871 24989952 ACGTTGATCCAGAAACCGA 59 24989994 24990014 GGGCTATAGTCAATACAGTGC 58 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602 2 1 2 93 3R 25842588 25843358 GTCTATCAGAAGGTGGAGGTC 59 25842515 25842533 ATTTCCGGATGTTCGACCA 59 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 3 1 1 154 3R 26038010 26038028 CATTGGACAATCGGAAGCT 58 26038202 26038222 ATAGTCATCGTGGTTAACCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 1 1 1 128 3R 26247245 26247263 AATGAAGGAGACAGGAGGC 59 26247026 26247045 GACAAGTCGCTGTAATTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085693 1 1 4 80 3R 26275675 26279162 CGATAAGGATGAGTCTCCGT 58 26275614 26275632 ATGGATGCGTACTTCAGGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 2 6 12 139 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397642 26397662 CAGTATGGTTATCTCCTCGGG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 8 13 154 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419562 26420548 AGTAGAGTTTCTGGTCGGT 57 NA Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 1 2 2 145 3R 27286755 27286776 GAGGGAAAGTTGAACTATTTGG 57 27286573 27286649 GCGTCCAGAAATCTATGCT 57 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 1 6 6 84 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 3 6 6 85 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554169 27554187 TCTTCATGATGGCTCACCA 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250,FBtr0301249 3 2 4 134 3R 5377424 5377444 AGCAATTTGGACTCGATAGGA 59 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462 2 1 3 105 4 272789 273461 TAAGCCTGAACGACCTAACC 59 272703 272723 ACCCGACATCTTAATATTGCG 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 2 6 6 100 4 974715 974733 AGAAATCCGGTGGTCACAG 59 974513 974653 TGCGAATGCAATTCTTGAGAG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 3 2 6 99 4 978508 978643 GATTAGTGCCAGGTACTCGA 59 978428 978446 CGTCTGCAATTCAAGTCGT 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 1 6 7 80 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080448 1081043 TCTGCTTGATGGAACCTGAG 59 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 2 5 5 81 4 1230678 1230696 CACCAAGTAGCTCAAGTGG 58 1230563 1230634 CTATTCTGCCCTGTAACTGG 57 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091632 3 2 3 85 4 1254538 1254562 CTAGAGGACTTAATACACTTAGCAG 58 1254605 1257745 TCATGTTTGCGCAGTTCTC 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 2 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643806 CATAATTATCGCTTGTCCGGAC 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 3 3 4 81 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643784 1643804 CCATAATTATCGCTTGTCCGG 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 3 4 8 81 X 2386428 2386447 ATAGTAATGATCGCAGACCG 57 2384863 2386384 CCAACGTCGTTATTCTCCT 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 2 7 12 81 X 3215178 3215197 TATATCGCTCCGATTCGGAC 59 3215239 3219968 TCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 2 3 3 82 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360595 3360614 TATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 3 2 2 85 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515242 4515260 AGTAGCGGCAGTTAAAGGG 59 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 3 4 4 153 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598371 GAGTGTTCACATAGTTGATGGC 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589 2 4 5 82 X 5123365 5123385 GGGATCATTCCTGAATCTGAC 58 5123429 5127484 GATCCAGCAGCTGTTTGAG 58 NA Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 1 2 2 83 X 5549754 5549772 CTATTGGTCGTCATGGGCA 59 5549631 5549712 ATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 2 2 2 118 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567274 5567292 CATCACAATGTAGACGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 3 2 2 81 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187708 6187726 CTTGCGCTTCAGGAAATCC 59 NA Nonspecific Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 2 7 21 81 X 6982619 6982637 TTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 1 3 3 93 X 8140692 8140710 TCGAGTATGGCATCACCAG 59 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 1 2 2 274 X 8375954 8375972 GATCGACCTACATTTGGGC 58 8376436 8376454 AATGTTCTGGTCGGATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 2 3 3 60 X 8466511 8466529 AGCTGTAGCTCCAATTGTC 57 8466318 8466337 CACCTTGTTCAGTTCATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 3 4 6 89 X 8478535 8478553 ATACTCGGAGATCCAGTCG 58 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 3 2 2 97 X 9091372 9091390 TCAAGGATGTGATCGGAGC 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850 1 1 2 92 X 9467349 9467444 TCATCCATCTCTACAGCGA 57 9467275 9467293 TTTGTTCATTCAGCTTGCC 57 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381 3 1 2 165 X 9623896 9624345 AAACAACTATCAGTGAGCCTG 58 9624472 9624490 GATGTCAATTTGAGGCGCA 59 NA InUTR Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 1 2 2 154 X 9823329 9823347 CTTCAGCGGTGATCATGTC 58 9823079 9823212 CATCGAAGAACAGCGAAGAG 59 NA Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783 2 1 2 87 X 10040920 10040938 TTTCATATGCAGACGCCTG 58 10040989 10042390 TCCTTGACTTTGTCCTGTG 57 NA DesignRelaxed Drosophila melanogaster 61 spri FBgn0085443 FBtr0112688 1 1 4 198 X 10413798 10469430 CATCATGGAACAAGTGAACCC 59 10413620 10413638 TGAGATTTGACTGGGCCAG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0301289,FBtr0073486,FBtr0073485 1 4 15 93 X 11293836 11299311 AAATGAACCGCAACCTTCC 59 11299368 11299386 TCCCAGAATAATCACCGGG 58 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0073547 3 2 4 86 X 11331115 11331133 TCATACTTGGAGGTCTCGC 58 11330817 11331067 GGATACGTTATTCTCCTGCAG 58 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 2 2 3 80 X 11592563 11592581 TAGTCGTTGATCCTTCGCA 58 11592623 11594666 CACCCATTAACACCATTTGGT 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 2 4 10 85 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 1 2 10 89 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848299 11856054 CGTTGATTGAGTTCGAATCCC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300201 3 1 7 84 X 12124392 12170551 CCATTCCAGCAGGTTTCAC 59 12170595 12170617 GGATACGAATATTAAGGCGATGC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 1 6 7 80 X 12168210 12168229 GATTCCCGTTGCGTAATTCC 59 12168266 12170561 GTTTATCTATGTGAAACCTGGATGG 60 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073660 1 1 5 94 X 12483941 12483959 GTCGAGATACCCAAGGACG 59 12483346 12483885 CAGAACAAGTCTGTAATGCGG 59 NA Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 3 1 1 114 X 13055031 13055049 TTATGACTTCAAGACGCCG 58 13055183 13055201 CGGAGTGTTTATCAGGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 2 3 3 81 X 13221563 13221581 CATGCACGATCTGCTTAGG 58 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301450,FBtr0301449,FBtr0112980 2 4 5 96 X 13549985 13550003 GCATACGTTCACCTACACG 58 13550063 13554786 GAAACCGCTCACATCTTGG 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 1 4 4 80 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607081 TATGTTGTGCTTGCGTGAG 58 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 3 2 4 81 X 13591263 13600186 CGACTATGTGAATGGCTTCC 58 13600227 13600248 CTTCTCATCCGTATTCACAACC 59 NA Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 1 1 1 66 X 13650624 13650644 CCATATGTACCCTATTGCCGA 59 13650510 13650528 CTCCTCGCGTAAGTAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 2 2 2 93 X 14918910 14918929 GAGAATAGGGTGGACCTGTG 59 14918985 14924634 TAAATTCGTTCGGGAGCGT 59 NA Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983 2 1 2 95 X 14993063 14993856 TGGATAAGTTTACGCTGCA 57 14993915 14993933 TATTCTTGCTCACTCCAGC 57 NA Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 2 2 2 83 X 15293118 15293253 GCCTAATGGTATACGACGAC 58 15293054 15293074 GTATCAGCGCTATCATATCGA 57 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 3 5 9 135 X 15714505 15714523 GAGAACCAGGAAGCAAGTC 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 1 4 9 103 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717401 15717419 CGGAATTCCAGTTTCGTCC 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074111 2 1 6 86 X 15754281 15754301 CGTGTAAGTAACGTATTGTCG 57 15754346 15755184 CTGCAGAAAGTTCATAGATCAG 57 NA InUTR Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 3 3 3 106 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802261 15802280 TCTTGCGTACTGATTTGCTC 58 NA Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 3 2 2 80 X 15810712 15810826 AGTGATTCTAAATGGACTTGGC 58 15810866 15810885 TTGGTATCCCAATCTGTCCA 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 2 4 4 80 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896736 15896927 CCTGGTCCAGCTTTAACCA 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 3 4 4 84 X 16193750 16193839 AGCTATTTGATCAAACTGGCG 59 16193885 16193903 TCTCGATGCGTTCTCTGAG 59 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074441 2 1 3 126 X 17183062 17195405 GAAATTCATAGAGTTGGATGCC 57 17182957 17182978 CTTGTACTCGTCAATCATTTCG 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 3 2 6 80 X 17794853 17797990 TTCACCCAGGCATATAGCA 58 17798034 17798052 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 1 3 7 91 X 18003566 18003584 CGAAGAGTATTACGAGCGT 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 2 3 7 93 X 18003568 18003586 TGCGAAGAGTATTACGAGC 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 3 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA DesignRelaxed Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 2 2 8 70 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19392909 19400529 TGTTCCTTCTGCTGACAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 2 2 5 110 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455729 19455747 TGATCTGCTTGAGGAACGA 58 NA Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 3 1 1 62 X 20052024 20052044 AGGAGATCCAGAATAACTGCG 59 20051849 20051867 GATCGTCGTTCTTGTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 2 2 2 81 X 20348720 20348738 ACAACAATGCCAAGTACGC 59 20348586 20348677 CGCTCAAAGACCTTATTGGTG 59 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537 1 1 2 147 X 20345366 20345384 CAACCTGTCGAAGATCGAG 58 20345024 20345255 GTAGTCCAACGACAGAACG 58 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 1 4 4 88 XHet 12051 12367 GATGATAACGATAATCGGAGACAC 59 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807 3 1 2 170 XHet 47479 51924 GTTACTCAGGCCAAAGCAG 58 52056 53591 AAGTTGATCCACCGTAAACAG 58 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 1 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 Sfp36F FBgn0261057 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33727 FBgn0053727 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31963 FBgn0051963 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U1848 FBgn0082926 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:684 FBgn0065058 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:MeU5-U42 FBgn0065051 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31282 FBgn0051282 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-2c FBgn0067339 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-12 FBgn0046831 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-210 FBgn0067724 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:Q FBgn0013703 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:Y FBgn0013710 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113717,FBtr0302542 3 2 3 80 XHet 71078 71099 CATTATTAGCGTCAGGATATGC 57 69218 71037 TAGTATCGTCGGATCTGGG 57 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-1192b FBgn0083000 FBtr0113565 3 1 1 60 X 17038387 17038407 TTTGGACCAGATCAAACTCCA 59 17038347 17038367 GACAGTTAAGTGGTCACTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR11700 FBgn0029856 FBtr0070931 1 1 1 60 X 6177163 6177181 CATCACCTTGGAGGTCGAG 59 6177121 6177141 GTCCTGTATCTTGGCTTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR32493 FBgn0052493 FBtr0070533 1 1 1 60 X 3321534 3321555 GTTCTATGGTGTAACGGTTAGC 59 3321495 3321514 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir20a FBgn0031181 FBtr0077213 1 1 1 60 X 21349507 21349526 CCTGATCCTCTACTCCTTCC 58 21349466 21349485 TGAAATCCAACGCATTACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 3 4 4 111 X 21313528 21313547 GATTGGTGGGATTAGGAACG 58 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 pen FBgn0015527 FBtr0077223 2 1 1 97 X 21219093 21219111 TAGTGCCTCACATGCTGTC 59 21218946 21219034 ATTCTTGATAATGGCTCTGCG 58 NA Drosophila melanogaster 61 CG1724 FBgn0031164 FBtr0077257 1 1 1 60 X 21073783 21073801 CAGAACGATCTAGGCAGAG 57 21073741 21073759 TATCGCCTGATCCCATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12679 FBgn0031103 FBtr0077332 2 1 1 60 X 20247205 20247225 CATCATACTGGAGGTTATCCC 57 20247165 20247185 ATCGGATACCAGGTAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 amn FBgn0086782 FBtr0074802 1 1 1 119 X 19781113 19781131 CATTATGCAACGACAGCGA 59 19781012 19781030 AGAGTGCTCTTGGGTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074808,FBtr0074807 3 2 2 60 X 19672610 19672628 CACTGGAGATGGATATGGC 57 19672568 19672588 TACTGCTCCATCTCATAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MKP-4 FBgn0031044 FBtr0074741 2 1 1 81 X 19517737 19517820 CTTGTGCACTGCTACTTCG 59 19517865 19517883 GGAAGTCCAGATTGTGTCG 58 NA Drosophila melanogaster 61 CG32537 FBgn0052537 FBtr0074687 3 1 1 177 X 19170266 19170287 TCACGTCATAAAGATTAGCAGC 59 19169361 19169439 CTCGAGATCGGCATTTACG 58 NA InUTR Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074632 3 1 2 92 X 18673864 18674717 GCACTACGTGAAAGGATGC 59 18674773 18674791 GGTGTCTGTCAGATCGGAG 59 NA InUTR Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300206 3 1 9 60 X 18266546 18266565 GGATGTTAGTGCAGAAGCAC 59 18267073 18267091 GATTGGCCTGTATCACGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 upd2 FBgn0030904 FBtr0300182 1 1 1 125 X 18136200 18136224 GATGAGCGAATACCAAGATATAACC 59 18135901 18136117 GTCTTTAGCTTCACCGCAC 59 NA Drosophila melanogaster 61 Taf8 FBgn0022724 FBtr0074514 1 1 1 80 X 17996725 17996801 CATGTTTCCTTTAATTGCCTGC 59 17996840 17996860 AAGTCAAACACCTGATCTGTG 58 NA Drosophila melanogaster 61 beta-Spec FBgn0250788 FBtr0074454 3 1 1 80 X 17562347 17562366 GGATATGTGACACGAAAGCA 58 17562407 17562541 AGCCATGTATACCTTATCCCA 58 NA Drosophila melanogaster 61 CG32564 FBgn0052564 FBtr0074390 1 1 1 60 X 17101662 17101680 CAATAGCGGCTTCTCAGGT 59 17101703 17101722 CTTCTCAAAGATACCGCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8949 FBgn0030812 FBtr0074412 1 1 1 83 X 16967345 16967363 GCGGTACAGCTTTATGCAG 59 16967215 16967298 CGCCGATCACGTTTATCTG 59 NA Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 2 2 2 60 X 16546040 16546123 CAACAGTCAAATTACCATACGG 57 16546142 16546162 GTGGAATACCTGCAATTTGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281,FBtr0074279 1 2 3 89 X 16342748 16343911 TTATGAACACGCTAGAAGCG 58 16343963 16343981 AAATTGCCGACAAATGCGA 59 NA Drosophila melanogaster 61 mei-41 FBgn0004367 FBtr0074271 2 1 1 101 X 16286006 16286083 ATCTCCAGATAGCAGCGAG 58 16286148 16286166 ACATAGGCCAGTACAAGGC 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 3 5 5 110 X 16277019 16277038 CTCACCGATCCCGTATAGTC 59 16276866 16276947 ACAAAGTTGTGCAAGTCCTG 59 NA Drosophila melanogaster 61 Muc14A FBgn0052580 FBtr0074205 3 1 1 80 X 15951591 15951612 CTGATGAGGATATTTGCTCGTG 59 15951651 15951816 ACTGAGAATGCTTTGAAGTGG 58 NA Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151 2 1 2 252 X 15880704 15880774 ATAGCAGGATCAACATGCTG 58 15880471 15880489 TTGAGCAGATCGTCCAGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8931 FBgn0030717 FBtr0074134 3 1 1 99 X 15878562 15878638 TGCTCAAATGCATAAGTATCGG 59 15878698 15878716 AATAGACCGGGTTTCTCGC 59 NA Drosophila melanogaster 61 CG9220 FBgn0030662 FBtr0074064 3 1 1 95 X 15484160 15484178 AAGAACCTCTACAGCACCC 59 15483956 15484103 GTACTGCATCTCGTAGTTCCA 59 NA Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074080,FBtr0074079 3 2 2 98 X 15343739 15343757 ATCTGGACAATCCGTTTGC 58 15343463 15343483 CCTCGAATGGATTGTAATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 3 2 4 125 X 14726982 14727183 GTAATCCGAACGACAGCAG 58 14727269 14727290 CCATTATTTAGTCGGTGGTACG 59 NA InUTR Drosophila melanogaster 61 CG32601 FBgn0052601 FBtr0073914 3 1 1 98 X 14273640 14273658 GATTCGCTGGGAAGTTTCG 59 14273715 14273738 GGAATCATAGTAATCGGAGTAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11103 FBgn0030522 FBtr0100218 1 1 1 60 X 13676999 13677018 GGATCACTACTTTGTGACCA 57 13677041 13677059 ATCCATACCGAGGAAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32639 FBgn0052639 FBtr0073734 3 1 1 66 X 13130416 13130434 CTTGCACGGATTTCCATCC 59 13130368 13130386 CATCGAACAGAAGCGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rad FBgn0261379 FBtr0302269 3 1 1 82 X 12928191 12928280 GACGTCTGTCGTTATCGTG 58 12928326 12928344 GTTGTTTCCACGGTCATGG 59 NA Drosophila melanogaster 61 ade5 FBgn0020513 FBtr0073705 3 1 1 188 X 12653942 12654394 ACAACAGCATCCATAGAGGG 59 12653773 12653791 ACCGTTGGTGGTATTGGAG 59 NA Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 3 2 2 81 X 11980915 11980933 CACCTATCAAGTTTGGCGC 59 11980784 11980872 CTTATGCAACGACTTATCGGG 59 NA Drosophila melanogaster 61 Muc11A FBgn0052656 FBtr0089803 3 1 1 109 X 11953908 11954411 GGTGTTGCTAGTGTTGACC 58 11954484 11954502 GATAGGAGAGTGGTCCCAC 58 NA Drosophila melanogaster 61 Muc11A FBgn0052656 FBtr0089803 1 1 1 108 X 11953909 11954412 GTGTTGCTAGTGTTGACCG 59 11954484 11954502 GATAGGAGAGTGGTCCCAC 58 NA Drosophila melanogaster 61 CG1840 FBgn0030351 FBtr0073571 1 1 1 195 X 11782682 11782759 AAACAGTTGCTTGCATCGT 59 11782918 11782936 TAGGCCTTAATCCACCTCC 58 NA Drosophila melanogaster 61 CG2025 FBgn0030344 FBtr0073601 1 1 1 80 X 11760811 11760830 GTTCGATTTACCTGAAGCCC 59 11760683 11760768 CACATGGCATCGTTCTTGG 59 NA Drosophila melanogaster 61 Cyp28c1 FBgn0030339 FBtr0073565 3 1 1 80 X 11734813 11734831 CAATCCCGGTGGTTATCTG 58 11734873 11734952 CGTAGGCTTTCATTAAAGCAG 57 NA Drosophila melanogaster 61 sbr FBgn0003321 FBtr0073411 2 1 1 80 X 10728727 10728930 CCAAACTGGTTAAGTTGGACG 59 10728667 10728685 TTTCGAGAAGACGTCCCTG 59 NA Drosophila melanogaster 61 CG2972 FBgn0030177 FBtr0071430 2 1 1 66 X 9977301 9977319 GATCAAGTTCCTTGTGGCG 59 9977349 9977426 CTCCGCGTATTCATTCAGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32703 FBgn0052703 FBtr0071329 3 1 1 80 X 9158975 9158996 TACCGTGAAGTTATATTCCTGC 58 9158853 9158937 GTTGGAGGCCTTAAAGATATCC 58 NA Drosophila melanogaster 61 CG15370 FBgn0030107 FBtr0071310 1 1 1 60 X 9120014 9120035 CACCATCATCACACTCATACTC 58 9120056 9120074 CATAATCGTCGTCCACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0112965,FBtr0071294,FBtr0071298,FBtr0071295,FBtr0071297 1 6 6 81 X 9007919 9008012 ATCATGGACATACGCTCGG 59 9008057 9008075 TCTTGTCCGAGTTGAGCAG 59 NA Drosophila melanogaster 61 CG12661 FBgn0030071 FBtr0071265 3 1 1 60 X 8817389 8817408 GAGAATCGCCTAGAGAAGTG 57 8817348 8817367 CCAAGCTATAATCGGATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 1 2 2 106 X 8763932 8764018 AGTTCCAGTGATGACGAGC 59 8764088 8764106 CTCTTTCGCTTGAGTTGCG 59 NA Drosophila melanogaster 61 CG1785 FBgn0030061 FBtr0071250 1 1 1 114 X 8609700 8609718 AGAAGGGTTGGATCAGTCG 59 8609794 8609876 TCGAATTTCTTGGCTTTGGTG 59 NA Drosophila melanogaster 61 Ir7a FBgn0029961 FBtr0071075 3 1 1 60 X 7660707 7660727 TTTGAGGAGGACTATGAGGTG 59 7660746 7660767 TATAGTAAAGACCGCAGAAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 1 2 3 93 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7564989 7565009 GATATGTGCAATCCGATCCTC 58 NA Drosophila melanogaster 61 CG15036 FBgn0040922 FBtr0071060 3 1 1 60 X 7318825 7318844 TGAGGCAATCCATAAAGCAC 58 7318784 7318802 CCAAGGCTTAAACACTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8300 FBgn0029937 FBtr0071015 2 1 1 114 X 6999320 6999339 CATGCTGTACTTTAGCGACG 59 6999413 6999835 CATTTCGCTCTCGTTTAAATGG 58 NA Drosophila melanogaster 61 Atx-1 FBgn0029907 FBtr0299814 3 1 1 103 X 6717668 6717739 CAAGATGGACTTGCAGGTG 58 6717806 6717824 ATTTGAGCTCGTACAGCTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Nf-YC FBgn0029905 FBtr0070974 3 1 1 137 X 6713123 6713203 CTGACTAATGTGCCGATCG 58 6713004 6713023 TTGGGTTGGTATGATGACCT 58 NA Drosophila melanogaster 61 CG3198 FBgn0029887 FBtr0070991 1 1 1 119 X 6567588 6567679 GGATCCGGAGTTCTGTCAG 59 6567487 6567505 TAGAGATGTCGGGCTTCCT 59 NA Drosophila melanogaster 61 CG33666 FBgn0053666 FBtr0302415 3 1 1 68 X 6370843 6370920 TTGACTACTCCGAAGCGAG 59 6370793 6370811 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 mab-21 FBgn0029003 FBtr0070890 2 1 1 135 X 5906189 5906207 CTATCCAAGGAGTGCATCG 57 5903155 5903173 TCTTCAGAATGCTCAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706 1 1 4 80 X 4582285 4582305 AGAAGTCAGGGTGTTTCTACC 59 4582347 4585684 GGTTCTCCTTGGTAACGCT 59 NA InUTR Drosophila melanogaster 61 pon FBgn0025739 FBtr0070681 2 1 1 109 X 4530940 4531152 ATCCATATGAGGTCGTCCG 58 4531225 4531243 GATCTCGAAGGGATTGAGC 57 NA Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 3 3 3 83 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372230 4372249 CTTCAGGATGTCATTGGCTC 58 NA Drosophila melanogaster 61 CG15578 FBgn0040905 FBtr0070659 2 1 1 60 X 4171818 4171839 GTCCATTATAATGGTCCTGGAG 58 4171779 4171798 GATGTTCAGCTCTGTGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2938 FBgn0029685 FBtr0070627 2 1 1 85 X 3829821 3829839 CACCAATGCCAAGAAGGTG 59 3829381 3829772 AGTCACTGCCGTATTTCCA 59 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571,FBtr0070572 2 3 3 60 X 3409488 3409512 GTTAAGTCATTAAAGGGACATAGCC 60 3409527 3409548 CGATTCGTACATTGATGATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fcp3C FBgn0000644 FBtr0070542 3 1 1 80 X 3067746 3067766 TTGGATCATATGTTTCCCTGC 58 3067614 3067706 CAGATGTTGTACGATCGTCTC 58 NA Drosophila melanogaster 61 CG14420 FBgn0029643 FBtr0070553 2 1 1 143 X 2833528 2833546 CTTCAACTGAGTCTGGCTG 58 2833755 2833773 CTTGTTGGCAATCGACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14424 FBgn0025644 FBtr0070563 1 1 1 190 X 2821180 2821199 GCAATTAAGTTGGTAGCCCT 58 2820680 2820698 AACTTAAGCAGAACCAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 1 2 2 80 X 2629127 2629219 GGATATACTGGATCCGTCGTC 59 2629067 2629086 GCGATTTCCTGGAACTTGTG 59 NA Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302448 1 1 4 111 X 2476757 2476775 TAGTGAAAGTGCAGTGGGA 58 2476848 2477050 CCGAATTGTATGTGGGTACTC 58 NA InUTR Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070337 1 1 7 147 X 1964533 1964551 GAACGTTCTCTTAGCTGCG 59 1962361 1962379 TTGTGTACTCCGAATCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4325 FBgn0026878 FBtr0070342 3 1 1 75 X 1937434 1937646 AGAAAGCAATCAAGGACTTGC 59 1937379 1937400 CCTCAAAGTCCAGATAAAGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14809 FBgn0040898 FBtr0070276 2 1 1 192 X 1651297 1651316 ATTTCTACTTCGGATTGCCG 58 1651124 1651142 CAAAGGATGCTGGACTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hfw FBgn0001189 FBtr0070270 2 1 1 80 X 1566317 1566401 ATTCGCTGAGCAAGATTCC 58 1566445 1566463 CTGCCAGGTAAATACGACG 58 NA Drosophila melanogaster 61 ns3 FBgn0028274 FBtr0070297 1 1 1 90 X 1356601 1356687 CTTATGGATACAATCGCGGT 58 1356530 1356550 CCATTGACGTAGTCTTTAAGC 57 NA Drosophila melanogaster 61 CG14624 FBgn0040357 FBtr0070204 2 1 1 71 X 1100985 1101003 TCACTACCTTCTCTGACGG 58 1101038 1101056 AACTGGAGGAAAGGTCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13360 FBgn0025620 FBtr0070147 2 1 1 103 X 682697 682717 ATCACTGTGCTTAATCATGGC 59 682550 682633 TGGAAATCCACGAATATGGC 58 NA Drosophila melanogaster 61 RpL22 FBgn0015288 FBtr0070148 3 1 1 123 X 658430 658448 GTCAAGAAGAACGTGCTGC 59 657015 658343 TGTACTTCTCGAAGTCGGC 59 NA Nonspecific Drosophila melanogaster 61 su(s) FBgn0003575 FBtr0070120 3 1 1 89 X 535038 535116 AATTGGAAAGCAGCACTCC 58 535167 535187 TGTAGTCCACCATGATGAGTC 59 NA Drosophila melanogaster 61 CG40930 FBgn0085538 FBtr0302237 2 1 1 60 U 7129994 7130012 ATGCTACCGAGGTGATCTG 59 7130033 7130054 TGTACCAGCGTTATATCTTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41087 FBgn0069947 FBtr0301119 1 1 1 90 U 2089793 2089811 CACGTTCACCATAATGGCG 59 2089667 2089740 CAATCGTCGTCCGATTTCTG 59 NA Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 3 2 2 80 4 1216413 1216483 AAAGCAATACCATCCGTACG 58 1216352 1216373 ACAGTGATACGATACATTCCCA 59 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 2 1 2 291 4 1051402 1052237 GATGTGGCTGAGTAGAGGA 58 1051129 1051150 ATAGATCTCAAATAGCCCAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 1 6 6 100 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974433 974453 CTGAAGTAGGAGTAAATGCCA 57 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 2 3 3 80 4 663046 663128 CCATTCTTGAGTCAGAGCCA 59 662985 663004 GTGATTGTTCCAGTGTCTGC 59 NA Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 3 2 2 80 4 607709 608476 TTGGAGCCAAGTTTCTGGT 59 608515 608538 TGTATTGATCTTCGTCTCCTAGTG 59 NA Drosophila melanogaster 61 lgs FBgn0039907 FBtr0089111 3 1 1 81 4 463538 463560 CCTTACTCAGATGGTAGATTGTG 58 463005 463500 AGAACTTATTTCAGCTTCCTCG 58 NA Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 1 2 3 60 3R 17123342 17123362 ATAACTGGTGTTTATCAGCGG 58 17123384 17123402 CAATAGAAGCGACAGGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acf1 FBgn0027620 FBtr0085845 3 1 1 80 3R 27625084 27625167 CGAAATATACGACGCTGGT 57 27625211 27625229 CTAGGCCTAAACGGTAGCT 58 NA Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085823 2 1 3 253 3R 27501093 27501187 CGATCCAAAGGGTATACCC 57 27501404 27501422 CTACCATGTTGGATCGGAG 57 NA DesignRelaxed Drosophila melanogaster 61 pasha FBgn0039861 FBtr0085820 2 1 1 99 3R 27444484 27444973 TGAGTCAGACAACGCTAGC 59 27445036 27445054 GGAATCGTATTCTTCGCCG 58 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 2 1 1 91 3R 27130059 27130729 CTTCAACAGAATCTGGCCG 58 27129986 27130004 GATTGCGACAGGTTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15563 FBgn0039832 FBtr0085771 2 1 1 60 3R 27057882 27057900 GGCAACCAGGATTCAAACG 59 27057840 27057859 GATCTGGACATTCAGGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0113312 3 1 2 106 3R 27052705 27052723 TCACCCTGACCAATCTTCC 59 27052790 27054429 GTAAGAGGTTTCTGTTGCAGTG 59 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085743 3 1 3 124 3R 26886879 26886900 CACACTGCGAATATCAAGATGG 59 26886171 26886799 CCTTCTTCTAATTCGACACTTACG 59 NA InUTR Drosophila melanogaster 61 CG31008 FBgn0051008 FBtr0085748 2 1 1 65 3R 26815466 26815484 TCGGATCAGGAATAACGGG 59 26815419 26815437 CGACTAAATCGCTGTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34432 FBgn0085461 FBtr0112733 1 1 1 60 3R 26474919 26474939 GATTTACTGCTCATCCAACCT 58 26474958 26474979 CCAAGGTGTAGAATAGGAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 3 5 5 83 3R 26289003 26289023 CATCTGCTCTATGACATCTCC 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595 3 1 3 69 3R 25865230 25865250 AAGTATCTGGTCACATTGCTG 58 25865115 25865200 AATCAGTCGTAGTCCAACCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG34298 FBgn0085327 FBtr0112494 3 1 1 133 3R 25825858 25825937 TCCAATGTGAGCAACATGC 59 25826031 25826052 TTATATCACTACTTTCGGTGCG 58 NA InUTR Drosophila melanogaster 61 CG15525 FBgn0039732 FBtr0085607 2 1 1 129 3R 25823186 25823204 AAACAAAGGAGGAGACGCT 59 25823013 25823031 TGATTCTATGTTGCCCGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15522 FBgn0039723 FBtr0085503 1 1 1 127 3R 25753726 25753744 GTACTCAGCTACGAGACGG 59 25753832 25753912 AGCAAGTATCCTGTTATCAGCA 59 NA Drosophila melanogaster 61 Dup99B FBgn0250832 FBtr0089608 2 1 1 95 3R 25541034 25541052 TCCTCTTGGTCGTATTGGC 59 25540904 25540977 ACTTCTCACGATCCTTCTGAC 59 NA Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 1 1 1 98 3R 24109753 24109832 TCGATCAAAGCGAAAGCAC 59 24109894 24109912 GAGTGTAGACGCTTTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14262 FBgn0039503 FBtr0085177 2 1 1 71 3R 23090474 23090493 ATTCCGGCATAACATCATCG 58 23090369 23090387 ATCAATGATGCGCCTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG17991 FBgn0039498 FBtr0085121 2 1 1 60 3R 23067301 23067320 CCATTGCATACCCGAATCTC 58 23067342 23067361 ATAAGATCGTTGGTCAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ser FBgn0004197 FBtr0085128 1 1 1 80 3R 23014178 23017240 GTTAGTCCATAAGATATCCGCA 57 23014119 23014137 TTGAGTAGATGGCTGTTGG 57 NA Drosophila melanogaster 61 TwdlD FBgn0039444 FBtr0085035 2 1 1 61 3R 22465808 22465892 TATCGTCCTCTGTCTGTTGG 59 22465916 22465934 GTTGGTAGTTGTAGCCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6036 FBgn0039421 FBtr0085027 3 1 1 60 3R 22170421 22170442 TGTGAATTTATTAGGTCACGGC 59 22170382 22170400 CGCTGTTAACAATCATCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0301641,FBtr0084953,FBtr0084952 1 3 3 80 3R 21810717 21810735 GGCTCTAAAGGTTTGCCTG 58 21810779 21810858 TGAGCCAACCTTAGCAGAG 59 NA Drosophila melanogaster 61 CG5913 FBgn0039385 FBtr0084938 1 1 1 60 3R 21719524 21719542 TACTCACGGAACTTGGCTG 59 21719566 21719584 AATCGCTGCTCTATGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 3 1 1 150 3R 21614032 21614174 TTTACGCCGTTCATTGTGG 59 21613900 21613918 ATAGAGTCCTGGATGCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5039 FBgn0039356 FBtr0084900 1 1 1 131 3R 21504762 21504783 GAAGTGGATACATCAATGTGGA 58 21504875 21504948 CGTTATTCGCTCCATCCTG 58 NA Drosophila melanogaster 61 CG5112 FBgn0039341 FBtr0084878 2 1 1 60 3R 21318279 21318298 AAACATTTCGAGGCAGTGAG 58 21318321 21318339 GCTTGGTATAGGGCAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10553 FBgn0039324 FBtr0084853 1 1 1 96 3R 21142518 21142595 GTGGATGGTCGTTCATCTG 58 21142440 21142458 TCGTCATCACCAAGAACCT 58 NA Drosophila melanogaster 61 CG11893 FBgn0039316 FBtr0084827 2 1 1 96 3R 21116672 21116690 AATGATGGTCTGTGGAAGC 57 21116813 21116831 TATTCGCTTTAACGGCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11786 FBgn0039264 FBtr0113282 2 1 1 81 3R 20872867 20872888 CAAGGATGATATGATGTCTGGA 57 20872925 20873013 GGCTAGTTTATCCTTATCTGTCTC 58 NA Drosophila melanogaster 61 CG5808 FBgn0027617 FBtr0084738 1 1 1 83 3R 20641089 20641108 GGAAGACGTAACGATGAGAG 57 20640963 20641043 GTTCCTGGATTGTTGCCTC 58 NA Drosophila melanogaster 61 CG34150 FBgn0083986 FBtr0301004 1 1 1 125 3R 20640182 20640200 CGTAATGAAAGCAGCGAGG 59 20640343 20640430 GATCCTTAGTTCATAAACACCATCC 59 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 1 2 2 84 3R 20196182 20196200 CATCTGTGATAGCAAGCGC 59 20196244 20196327 GGTTGGTAGTGTAAACACAAGTC 59 NA Drosophila melanogaster 61 CG13607 FBgn0039151 FBtr0084585 1 1 1 60 3R 19941686 19941704 TGGATCTAATACCGGAGCA 57 19941644 19941662 GTCTGGGATTCCTTGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084538 3 1 3 60 3R 19877444 19877465 ACAATTGAAACGTCCAGAACTC 59 19877567 19877586 CCGCAAATCTAGGGATTCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0113393,FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 3 5 5 81 3R 19798242 19798343 TTATAAAGAATCCCGTTGCCC 58 19798386 19798404 AATCGCTTACGGCAAACTG 59 NA Drosophila melanogaster 61 CG13597 FBgn0039124 FBtr0084525 2 1 1 170 3R 19718991 19719073 AGCTAATATTAGGAGTTGGGTG 57 19718842 19718861 CTAGGATGTTTGTCCTTCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 3 3 3 87 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590550 ATTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 cdc16 FBgn0025781 FBtr0084377 3 1 1 80 3R 19107618 19107638 ATCCATATACTGCTTTGAGGC 58 19107678 19107752 TGCATTAGCTCAAACTCTTCC 58 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0301491,FBtr0084386,FBtr0084385,FBtr0084384,FBtr0100227 1 6 6 80 3R 19092054 19092072 GAGGATGCCCTATGTTCCA 58 19091938 19092010 GCAGAAGTATCGGAAGCAC 58 NA Drosophila melanogaster 61 Gr94a FBgn0041225 FBtr0084346 2 1 1 60 3R 18877665 18877687 CAGCTATATGAACATTACGGTGG 59 18877704 18877725 GTCACTGATTATCATTTGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17625 FBgn0039002 FBtr0084301 2 1 1 60 3R 18512863 18512886 GAGATTGAACTGAAATTAGACCCG 59 18512905 18512923 TTTCCAGGCACTTTAGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 3 3 3 97 3R 18370540 18370561 ATTCCAGCTATTCACTACAGCA 59 18370401 18370482 AGAATGTAGAGGAGGCCCA 59 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485,FBtr0084256 3 2 2 120 3R 18304658 18304676 CAAGTGTAGCCAGAATGCG 59 18304758 18304835 GGCAATCGATTCATCATAGCA 59 NA Drosophila melanogaster 61 CG5379 FBgn0038956 FBtr0084235 2 1 1 148 3R 18212708 18212796 CTTTAAGGTTGTTCGATCGGG 59 18212580 18212598 CCCTGTCAAGAGATCCCAG 59 NA Drosophila melanogaster 61 CG34131 FBgn0083967 FBtr0110878 3 1 1 73 3R 18188666 18188744 GAGAGCTCTACAAGGTGCC 59 18188781 18188799 AAGAAAGGCCTCGATCTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ir94b FBgn0051424 FBtr0084249 2 1 1 60 3R 17941564 17941582 GAAAGCTACCAGCGATCCA 59 17941522 17941544 CGACAATTAAATCCTCTGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cchl FBgn0038925 FBtr0084185 3 1 1 139 3R 17852265 17852283 GGTACTTAAGTGGGAGGCG 59 17852087 17852105 CATGCCTATCGAATGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6690 FBgn0038918 FBtr0084149 2 1 1 60 3R 17739033 17739054 GGTTTCCTAAAGTCCAGTTTCC 59 17739073 17739093 CCTGAATGTGTATAGCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr93d FBgn0045468 FBtr0084158 1 1 1 163 3R 17671339 17671418 CATTGGATGAAATCGGTGGA 58 17671195 17671216 CGATACACGATTACACATTGTG 58 NA Drosophila melanogaster 61 CG5892 FBgn0038873 FBtr0084052 3 1 1 82 3R 17070122 17070210 TAATTACTCTTTGATCAGCGGC 59 17070253 17070271 CCCGGTTGTGGGTATAGTG 59 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 3 3 3 115 3R 16837648 16837666 CTACAGTCGACAAGCTGGT 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0083993,FBtr0110823 3 2 2 64 3R 16647076 16647157 AGCAATACCAATACGAACAGG 58 16647032 16647050 TTGCTGATATTGGACCGGT 59 NA DesignRelaxed Drosophila melanogaster 61 Or92a FBgn0038798 FBtr0083887 3 1 1 96 3R 16331619 16331705 TGATATCTTCAAGCTCTCGGA 58 16331760 16331781 GCGATAATAAATTGCAGGATGC 58 NA Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083836 1 1 2 94 3R 15885347 15885367 CGTATATTCCATAGTCGCCTG 58 15883081 15885291 GTTCGAGCGTCATGTTCTC 59 NA Drosophila melanogaster 61 Cyp12a5 FBgn0038680 FBtr0083730 1 1 1 84 3R 14959527 14959548 CGAGAAACTACTGAAGGTTGAC 59 14959591 14959663 GCTCGAAGTAGTATCCACTCC 59 NA Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083728 3 1 2 195 3R 14920796 14921136 ATATCTGTGCAGAATGGCC 57 14921294 14921313 CACAAGCTTCTTGTAGTTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14298 FBgn0038654 FBtr0083695 3 1 1 153 3R 14701518 14701537 AATCAATCTGACGTTCCTCC 57 14701652 14702473 GCAGTTGAAATTGTTCAGCT 57 NA Drosophila melanogaster 61 CstF-64 FBgn0027841 FBtr0083660 1 1 1 111 3R 14485550 14485633 GTCTTGTCACTGAAACTGGTC 59 14485706 14485724 CATTCAGATTCCGCATGGC 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0290210 2 1 5 90 3R 14411779 14412008 ACTTTAATCCGAGGTGGCA 59 14412061 14412080 TCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 1 2 2 88 3R 14197162 14197464 ACAATTCTGGATTCCCTGGA 58 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100275,FBtr0083603 3 2 6 203 3R 14080951 14081049 GTTTCCCAAAGTGGCACTC 59 14080766 14080784 ACACTGCTATTCTGGTCCC 59 NA DesignRelaxed Drosophila melanogaster 61 htl FBgn0010389 FBtr0083550,FBtr0083549 1 2 3 170 3R 13875053 13875071 GCGGACCAATTTGGAACAG 59 13874242 13874260 CTTCTGGAGGGTGGATTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nonA-l FBgn0015520 FBtr0083335 1 1 1 60 3R 12466418 12466438 CGCAAAGAACAATGAACTCTC 58 12466460 12466478 GTTACTATGGTTCGGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14892 FBgn0038447 FBtr0083327 1 1 1 120 3R 12421705 12421787 GTTCACAACGATCTCTTTAACC 57 12421868 12421886 GCATCACGATCTTCTCGAC 58 NA Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110963 2 1 2 70 3R 12298720 12298738 AGTGAAACTTAACCACGGG 57 12299098 12299117 ACACTCTCATACAGCATTCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 bor FBgn0040237 FBtr0083276 3 1 1 92 3R 12087640 12087722 TAAGCAGAAGATGGCCTGG 59 12087566 12087584 TTTGCAGTTAGGGTGAGGG 59 NA DesignRelaxed Drosophila melanogaster 61 Fer2 FBgn0038402 FBtr0301709 1 1 1 80 3R 11975900 11976042 AAACGCATCCAGAGTAGCA 59 11975838 11975856 CAGACGTTTCTCGTACGGA 59 NA Drosophila melanogaster 61 CG5916 FBgn0038401 FBtr0083251 2 1 1 88 3R 11973381 11973472 TTCAAAGTTCAGCGATGTGG 59 11973519 11973541 GGTAACCATCCATGAACTTTGAG 59 NA Drosophila melanogaster 61 ird5 FBgn0024222 FBtr0083236 2 1 1 82 3R 11873127 11873146 CTCCTTTGCCTATGATCAGC 58 11873009 11873082 GTGCACTGCTGATAAGCTG 59 NA Drosophila melanogaster 61 spn-E FBgn0003483 FBtr0083183 3 1 1 81 3R 11667698 11667719 GTTCAAAGTGAGGTGTACAAGG 59 11667758 11667835 ATGCACTCGGATTCATTATGTG 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 3 4 4 97 3R 11217378 11217396 CATGTTCGACTACGACCCA 59 11217454 11218025 CACCAAATACCTTGATCGTGTC 59 NA Drosophila melanogaster 61 CG14868 FBgn0038330 FBtr0083109 1 1 1 81 3R 11194556 11194635 AGTACAAGACAATGTTGGATGC 59 11194496 11194516 AGAATGGTGTCCTCATTTGTG 58 NA Drosophila melanogaster 61 MRG15 FBgn0027378 FBtr0083125 3 1 1 178 3R 11103270 11103348 GATAATAAGAAAGGCAGCGCC 59 11103112 11103130 TTAGTAGTCGTGGTGCCAG 59 NA Drosophila melanogaster 61 CG7262 FBgn0038274 FBtr0083008 2 1 1 83 3R 10722231 10722249 CGGAGTCTTTGATACCACC 57 10722104 10722186 AAGAGTCCACTGTTAACATCG 58 NA Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 1 2 2 93 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571992 10572010 ATCCAAATTGGGACCTCCA 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 1 5 5 80 3R 10090935 10090956 CGATAACCTTGTAGTTGATGCC 59 10090816 10090896 GAATAGCAATTCGGCTCACAG 59 NA Drosophila melanogaster 61 CG34044 FBgn0054044 FBtr0100099 3 1 1 70 3R 9538976 9539043 TTGCATACCTCACTTTGATGC 59 9538926 9538944 GGATGTTGCTCTTCCTGGT 59 NA DesignRelaxed Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 Rbp4 FBgn0010258 FBtr0082853 3 1 1 82 3R 9480564 9480584 CTTCAAGCCAGCTAAATCTCC 59 9480415 9480522 CTTAGATACCGTAGGGTGGTG 59 NA Drosophila melanogaster 61 wntD FBgn0038134 FBtr0082775 3 1 1 60 3R 9118644 9118663 TTTCGTGCAGAAGAATTCCA 58 9118603 9118621 CACATAGACATCCTCCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8141 FBgn0038125 FBtr0082734 3 1 1 127 3R 9017512 9017579 TCATGGCCTTCAAGGTGAG 59 9017670 9017688 AGCGAAGTCTAGTTCCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 pic FBgn0260962 FBtr0082709 1 1 1 80 3R 8881939 8881960 GATGGAGATCTAATTGAGAGCT 57 8882001 8882081 CAGTGTCAACTCCAATCCC 58 NA Drosophila melanogaster 61 CG31345 FBgn0051345 FBtr0082689 2 1 1 88 3R 8637489 8637680 GTTCTCCAGATTCGACACAG 58 8637360 8637381 TACGCGAATTATTCATAGGAGG 58 NA Drosophila melanogaster 61 CG10035 FBgn0038028 FBtr0082606 1 1 1 114 3R 8208148 8208166 GAAGGAAACTCGGAAGCAG 58 8207983 8208001 TCAGGTACTGCTGAAAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pglym87 FBgn0011270 FBtr0082620 2 1 1 60 3R 8058306 8058325 GTTCTCGAAGTCATCATCCG 58 8058265 8058283 CACAATCCTGTACTTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 glo FBgn0259139 FBtr0089918 1 1 3 82 3R 7643773 7643791 GTTGTGAAGCTTCGTGGTC 59 7642461 7643732 GCGGAATATCTCAATATACCAGAG 58 NA Drosophila melanogaster 61 I-t FBgn0025821 FBtr0082427 3 1 1 60 3R 7529826 7529849 CTAACCCATCCAATATGAAGAAGG 59 7529867 7529886 CCAAGGTGAATGGGAAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300581 3 1 2 81 3R 7451340 7451430 CGGAATCACTACTGCTACG 57 7451277 7451298 TATGAATATTGCTGGACAGGTG 58 NA Drosophila melanogaster 61 CG6808 FBgn0037921 FBtr0082451 2 1 1 82 3R 7447782 7447803 AACCTTACCAATGTTGCTACTG 59 7447651 7447739 TTCATTCGTGTGCAAACGT 59 NA Drosophila melanogaster 61 CG14708 FBgn0037910 FBtr0082409 1 1 1 60 3R 7380332 7380353 ATGTCAATTACCATGAGGACGA 59 7380374 7380392 CGAAACAGACGCTCATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scpr-B FBgn0037888 FBtr0082362 2 1 1 60 3R 7066236 7066254 GAGCCGAGACAGAGTACAC 59 7066194 7066213 GCAAACCAGTTCTCGATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 1 5 5 126 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 3 2 2 277 3R 6706821 6707298 GGAGCATGATACTTAAATGCCA 59 6706565 6706583 GATCTTTAGCACGTCCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6567 FBgn0037842 FBtr0113217 2 1 1 134 3R 6679473 6679494 CATTTCATCCATTGAGGAACAC 58 6679299 6679381 TTCATGCCAAATACACTCAGAG 58 NA InUTR Drosophila melanogaster 61 TfIIFbeta FBgn0010421 FBtr0082310 3 1 1 119 3R 6592970 6592989 CTAAAGCTGGAGTCCATACG 57 6592805 6592890 CTCCCGATATTCAATGTTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG14689 FBgn0037826 FBtr0082317 3 1 1 60 3R 6536376 6536397 CTATCTCAGTCAGTATCGCCTC 59 6536337 6536356 CTCTCCCTTCAGAATCACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2c FBgn0037783 FBtr0082176 2 1 1 94 3R 5886202 5886220 CAAATCGACGATTGTGACG 57 5886278 5886410 TTCATGGTATTGCGAGTGG 57 NA Drosophila melanogaster 61 topi FBgn0037751 FBtr0082135 2 1 1 80 3R 5601361 5601440 AATCGGTCTTTCATGGATCTC 58 5601482 5601500 ACTGGACCAAACATGTTGG 58 NA Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 1 2 2 113 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597851 5597930 ATCCACTTTCTTCAGCTTTACG 59 NA Drosophila melanogaster 61 CG32937 FBgn0052937 FBtr0082089 2 1 1 60 3R 5552345 5552363 AACAGCCACTTGACAATCG 58 5552303 5552321 GCTCATTGGCACTACTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dmt FBgn0016792 FBtr0082086 2 1 1 175 3R 5539140 5539158 GCGAATCACATTCGAAGCA 59 5539297 5539600 TCGTCTGGGTTGCTTATCG 59 NA Drosophila melanogaster 61 CG9444 FBgn0037730 FBtr0082099 1 1 1 86 3R 5507627 5507706 CAGGAACGAATAAAGAATTCCC 57 5507562 5507580 TAATTCGCCCATCATGAGC 58 NA Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082078 3 1 2 104 3R 5457566 5458106 ATCGTTGAAACCGAAACCT 57 5458172 5458192 CGGCAGGAAAGATATCATCTC 58 NA Drosophila melanogaster 61 Vps45 FBgn0261049 FBtr0082070 1 1 1 87 3R 5389762 5389782 CGGCATTAAGTTGTACATCGA 58 5389829 5389912 TATACTGGTCGTCTCCTTGTC 58 NA Drosophila melanogaster 61 CG11970 FBgn0027503 FBtr0081959 2 1 1 83 3R 4812012 4812220 ATTAGAACAACCGGAAAGTCC 58 4812265 4812283 CTTCCGACAAACTGTGCTC 59 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922,FBtr0081921 2 2 2 80 3R 4652242 4652265 ATAGCTATGATGAGCTCTACTACG 59 4652303 4652376 TATAGCGAAGAACCATGGCA 59 NA Drosophila melanogaster 61 CG33325 FBgn0053325 FBtr0081952 3 1 1 77 3R 4506028 4506046 CTGGAACGATCGGATTCCA 59 4505501 4505520 GTACATTGCATCGGTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 p FBgn0086679 FBtr0081887 2 1 1 154 3R 4489275 4489375 ATCGCATCAAGTACACCTG 57 4489139 4489157 ATTTGCCGATATGCTGAGG 58 NA Drosophila melanogaster 61 Pbp95 FBgn0037540 FBtr0081786 1 1 1 87 3R 3840013 3840143 AAACAACAGTTACTGGAGCA 57 3840193 3840211 TTAAGTGTCGCTCGATTGG 58 NA Drosophila melanogaster 61 CG34384 FBgn0085413 FBtr0302036,FBtr0112625 2 2 2 80 3R 3670934 3670953 TTGATAGCCACCATCAGGAG 59 3670995 3671117 GTTTGGATTGAGCAGGTAGG 58 NA Drosophila melanogaster 61 CG2641 FBgn0037518 FBtr0081745 2 1 1 80 3R 3619973 3619993 ATTTACTACAGTGGTGAGACG 57 3620032 3620602 AATGTATACCTCGTTCACAGAC 58 NA Drosophila melanogaster 61 CG1287 FBgn0037506 FBtr0081554 2 1 1 60 3R 3327570 3327589 AACCGAGTATCTACGACCAC 59 3327529 3327548 GCATGAATACGATCCCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fer1 FBgn0037475 FBtr0081567 1 1 1 112 3R 2963298 2963579 GACTAAGCAAGGTGGACAC 58 2963655 2963673 GTTACGCTGCAGACTTAGG 58 NA Drosophila melanogaster 61 CG1105 FBgn0037465 FBtr0081645 1 1 1 90 3R 2890484 2890610 TCCTAATATACCGCCACCG 58 2890412 2890430 GATCATCTGCGTATGCTCG 58 NA Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 2 1 1 86 3R 2886703 2886777 AAAGAAATTCTCAAGCCCGA 57 2886823 2886844 CTTGATCACATGAATCACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34297 FBgn0085326 FBtr0112493 2 1 1 81 3R 2573017 2573105 GCTCTTTGTTTCATCAAATCGG 58 2572957 2572978 TCTTCTCGTCCAATTTGTTCAG 59 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 2 2 2 84 3R 2467215 2467233 AAGAGATCGCCATGGAGTC 59 2467281 2467355 CTTGGACAGTTTCCAAGCA 58 NA Drosophila melanogaster 61 CG31560 FBgn0051560 FBtr0078609 1 1 1 60 3R 2135951 2135969 CGGAACAGGATATGGAGAC 57 2135992 2136011 CTGGCTAGTGAAATAGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 1 2 2 134 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671325 1671343 AAGAAGTACGGACTCTCGG 58 NA Drosophila melanogaster 61 Hpr1 FBgn0037382 FBtr0078667 1 1 1 82 3R 1645353 1645428 TTGGGAAATGACAACCTAACAC 59 1645292 1645310 AGGAAGTTTCGCTGTTCAC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 asl FBgn0261004 FBtr0078743 2 1 1 81 3R 1432100 1432121 CATAAATTCTACACTGGACCGG 59 1431984 1432058 AATCCGTCCAAGCTCTTCC 59 NA Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0100433 1 1 2 85 3R 1201572 1201590 AATTAACCGCAGGTTCCAG 58 1201639 1201719 TCTTATGGGCTTTGTCGTG 57 NA Drosophila melanogaster 61 CG12001 FBgn0037265 FBtr0078861 1 1 1 80 3R 482306 482330 CTCCGTATATCATTTCCAAGATGAC 59 482367 482633 CCACCTCAACTGAAGTTTGG 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0078903 3 1 2 80 3R 134134 134347 GAATGGACAAGTGCTTATTTGC 58 134386 134406 GTAGGTTGAGGATGATTTCCC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1837a FBgn0086660 FBtr0091629 1 1 1 60 3L 5757426 5757445 CAACACTTGCAAAGATCAGC 58 5757385 5757405 CAGTCCTGAATAATAGGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32458 FBgn0052458 FBtr0078566 1 1 1 60 3L 23025274 23025294 GAGTGATTCTGTTGAGACACC 58 23026605 23026626 TAGAAGTGGATTAATAGCGAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14452 FBgn0037180 FBtr0078520 1 1 1 60 3L 22689092 22689111 TTCTTTCCGTCCTAGGATGC 59 22689132 22689152 GATGTAGATGTGCTGCTACTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 2 2 2 85 3L 22672448 22672531 GGACAGTCAGGTATTTAAGAAGG 58 22672576 22672594 AAAGACTGTAGTCCGCCTG 59 NA Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 3 1 1 72 3L 22641079 22641150 TTGTCATAAAGCAGAGCGG 58 22641181 22641204 GAGAAAGTCGATCTGTTGTATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14459 FBgn0037171 FBtr0113185 3 1 1 111 3L 22576186 22576204 CCTACGACTTCTCCAACTC 57 22575184 22576114 ACACAGAGACCGTTATTATGAG 57 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 1 1 1 60 3L 22279928 22279947 CTCAGGCATAATGACAACCC 58 22279822 22279908 CAAGATCTTCATTGCTCTTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CycH FBgn0022936 FBtr0078439 3 1 1 80 3L 21816142 21816221 GATAGCGAACTCTATAAGGAGC 58 21816262 21816280 GTGGAATGAGGCATCTTCG 58 NA Drosophila melanogaster 61 CG14569 FBgn0037123 FBtr0078456 1 1 1 60 3L 21724138 21724157 TGTAGCTAGCAGTCTTGACC 59 21724097 21724115 AAATCGCTGGTAGAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pros54 FBgn0015283 FBtr0078368 1 1 1 80 3L 21530411 21530429 TCAATCTGGTCTGCCTGAC 59 21530473 21530551 CTTCAACGGTGTTGGACAG 59 NA Drosophila melanogaster 61 CG32432 FBgn0052432 FBtr0078268 2 1 1 81 3L 20840715 20840733 GGAGAGCTATGTGTCCACC 59 20840599 20840676 GAAATCCAGTGGTCTTAATACTGTG 59 NA Drosophila melanogaster 61 CG18281 FBgn0037003 FBtr0078206 2 1 1 75 3L 20494075 20494096 GATCCGACTGGGATTATTACTC 58 20494131 20494150 CCAGTACATCCAATGATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 1 5 5 143 3L 20381818 20381836 CTACTTCGAGCCCAAGGAC 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 RhoBTB FBgn0036980 FBtr0078185 1 1 1 84 3L 20371678 20371696 CGCTATCTCAGCTCCTCTC 59 20371744 20371825 GATCGCTCGAGTACATCCT 58 NA Drosophila melanogaster 61 CG6289 FBgn0036970 FBtr0078172 3 1 1 97 3L 20336865 20336884 GGCCTCCAAGAATGAATCTG 58 20336942 20337019 TTAGTCCAGCCTCATATACGG 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302714,FBtr0302712,FBtr0302713,FBtr0302716 2 5 5 83 3L 20148055 20148073 GATCCAAACGGCCATATGG 58 20147928 20148011 GCTAGGAACAAATCAGTCACTG 59 NA Drosophila melanogaster 61 obst-J FBgn0036940 FBtr0074866 2 1 1 137 3L 20124809 20124827 GATTCCCAGCATAAACGCG 59 20124632 20124650 CAGGGATCGGATATCCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0100394,FBtr0074919 1 3 3 138 3L 19875865 19875883 ATGAAGAGCGATGTGTCCC 59 19875680 19875764 TCAATTGAGCTGCATTGGAG 59 NA Drosophila melanogaster 61 Rab8 FBgn0015796 FBtr0074921 3 1 1 89 3L 19862400 19862478 CTGCAGATATGGGACACTG 57 19862329 19862347 ATATACCAGCATGATGCCC 57 NA Drosophila melanogaster 61 Cyp305a1 FBgn0036910 FBtr0074925 1 1 1 118 3L 19806258 19806278 GCGATTCTAATTGGTTTCGTG 58 19805024 19805279 TCCTTACGGAACTGTAATGTG 57 NA Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 2 2 2 80 3L 19799485 19799505 GTCAAGTGAACAGTGAAAGCA 59 19799547 19799622 GTATGCTTTCTTGCCTGGC 59 NA Drosophila melanogaster 61 CG33647 FBgn0053647 FBtr0091624 1 1 1 60 3L 19229483 19229502 ATTGGTTGACCTGATTCTGG 57 19229525 19229602 AACTTCTTTCTCTGCACGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG6893 FBgn0036807 FBtr0114373 3 1 1 83 3L 18687416 18687434 GGATAGGACAACATCCAGC 57 18687481 18687553 CACCGTGGACGTATTATCG 58 NA InUTR Drosophila melanogaster 61 CG32198 FBgn0052198 FBtr0075099 1 1 1 60 3L 18520143 18520162 CTTTGCTCTTGATGATCCCA 58 18520185 18520203 CGAAGTTGGAGATGTTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 W FBgn0003997 FBtr0075133 3 1 1 77 3L 18177899 18177917 CAGGATGTACCAGAGCCAG 59 18166603 18166621 CCCGTGAAATTGCAAGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 3 2 2 80 3L 17885508 17885526 GACGACCAACTTCATCAGG 58 17885372 17885467 ATGCCAAAGATCATCAGTATGG 58 NA Drosophila melanogaster 61 CG5506 FBgn0036766 FBtr0075157 1 1 1 94 3L 17877302 17877388 TCGACTTATGATACCGAGCA 58 17877227 17877245 AATCCGTAGGGATCGAAGC 59 NA Drosophila melanogaster 61 CG5567 FBgn0036760 FBtr0075161 2 1 1 92 3L 17836432 17836453 ACCAATCTCCTGGAATTATCCT 58 17835644 17836379 GATCCAAAGGACACCATCG 58 NA Drosophila melanogaster 61 Jon74E FBgn0023197 FBtr0075207 2 1 1 85 3L 17541552 17541657 GAATGACGAATCCACTGCA 58 17541485 17541504 CGTAGGAGTATTCACAGTCC 57 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 1 3 10 191 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923958 16923976 TTGATAGGCTCCATAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175,FBtr0075302,FBtr0075301,FBtr0075300 1 4 10 100 3L 16928398 16928600 CTCTTGGTTCTTGTTCAAGGA 58 16928318 16928339 AGGTTCTGGTGAATAGTTTCAG 58 NA InUTR Drosophila melanogaster 61 CG13028 FBgn0036676 FBtr0075261 2 1 1 60 3L 16916586 16916607 ACCCAATGGATCACTAATACTC 57 16916628 16916646 GTCCTGTAGGTTACTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-tyr FBgn0027080 FBtr0075410 2 1 1 189 3L 16411637 16411717 CATGAATCCCATGGTTCCC 58 16411466 16411484 CTTGAACAGCGAGAACAGG 58 NA Drosophila melanogaster 61 CG4950 FBgn0036587 FBtr0290260 2 1 1 60 3L 16260093 16260114 GTTTAACAACCTGACCATTCTC 57 16260054 16260076 CTTCAGATTAGTCAGATAGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hip14 FBgn0259824 FBtr0075518 3 1 1 81 3L 15983091 15983109 GGTGTGCTTCCTTAAGTCG 58 15983151 15983240 CTCAATGATGGTCTTAAATCGC 58 NA Drosophila melanogaster 61 GXIVsPLA2 FBgn0036545 FBtr0273189 1 1 2 80 3L 15948344 15948365 GCCATATACCTTCTTACGTTCC 58 15948405 15948497 CATCCCTTAGCTTACGTGGA 59 NA InUTR Drosophila melanogaster 61 Eig71Ec FBgn0004590 FBtr0075586 3 1 1 154 3L 15644934 15645032 TACTTGTCGATTGACACTCGA 59 15644800 15644818 GGGTCCTACGAGTAGTTCG 59 NA Drosophila melanogaster 61 Aats-gly FBgn0027088 FBtr0075632 1 1 2 288 3L 15088264 15088282 GAAATTGCAGCCGAAAGTG 58 15088622 15088640 CTCAATCTCGGGATTCGAC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Or71a FBgn0036474 FBtr0075659 3 1 1 80 3L 15070455 15070473 CTTAAATCGACCGGTGACC 58 15070343 15070412 GCTTGATTCATGGTCTTGGT 58 NA Drosophila melanogaster 61 CG13461 FBgn0036468 FBtr0075664 2 1 1 60 3L 15045243 15045261 CGATTCAGAAGGCGATCAG 58 15045201 15045219 TCCGAATGGTCGAATCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 2 2 2 86 3L 14858469 14858826 CATCCTGACAGTTAAGGAGCT 59 14858874 14858892 AACACATCACTCGACTCCG 59 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651,FBtr0299649,FBtr0299650 1 3 3 80 3L 14739260 14739340 CCCAGATTCCTATTCTGTTACC 58 14739378 14739399 GCATAGATCACAGACTGATTGG 59 NA Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075843 1 1 3 60 3L 13375928 13375947 CATCGTAGGTAAGTCTCGCA 59 13375966 13375988 CCAGTTAATTATGGGACTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32115 FBgn0052115 FBtr0075904 1 1 1 109 3L 12906233 12906251 TTTACGAGGAGCACTCGAG 59 12906082 12906160 ACGTATTTCACGACCTGGT 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 2 3 3 103 3L 12843424 12843609 GGAGAGTACATACTGCTCCA 58 12843674 12843693 GAGGTGAGATAAATCCTGCC 57 NA Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 1 2 2 80 3L 12781718 12790792 GGTCATGGAGTATTGCAATGG 59 12781658 12781676 AGTCTAACGGTATCCTCGC 58 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 1 2 2 80 3L 12763432 12763506 AGTGCATTACAGCAAACCC 58 12763370 12763389 CAAATCCTCGTTACGCTGAC 59 NA Drosophila melanogaster 61 Tsf2 FBgn0036299 FBtr0075966 3 1 1 80 3L 12525248 12525271 CTTCCATACTCTATGAGAAGTTCC 58 12525128 12525210 GACTAGAATCCTGGAACAGC 57 NA Drosophila melanogaster 61 CG6163 FBgn0036155 FBtr0076181 2 1 1 100 3L 11357013 11357721 CATGTGCCGACAGTTAAGC 59 11356931 11356951 GTGTTGAATCGATCCTTGTGG 59 NA Drosophila melanogaster 61 APP-BP1 FBgn0261112 FBtr0076208 2 1 1 138 3L 11092764 11092851 GTTAAACAAGAAGAGCAACGTC 58 11092950 11092968 CAGGGCGATATAGGAGTCC 58 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 3 3 3 81 3L 11064015 11064034 CAACCGGTTACCTCAATCTG 58 11064077 11064161 AGTGGCGAATTCTTTCTCAG 58 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 1 1 1 111 3L 10883144 10883320 CAAAGATGTTCCGCTACCTG 59 10883394 10883412 ATGTCGGAACCGATCTTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32060 FBgn0052060 FBtr0076283 2 1 1 116 3L 10417909 10418211 GTTAATGAACGAGGATCAGGC 59 10418289 10418307 GTAGACAGCCGCATTTAGC 59 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282,FBtr0076281 2 2 2 60 3L 10406982 10407000 CTCGGAGACATCGAATTGG 58 10407024 10407042 GGTAACATTGCACTTGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ilp4 FBgn0044049 FBtr0076372 1 1 1 66 3L 9797084 9797103 GGCACTGGATGTGATTTGTG 59 9796976 9797055 ATCCTTAGACGCACTGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 1 2 2 69 3L 9723674 9723692 CATGGCCATCATTGCTGTC 59 9723724 9723835 TTTATCGATCTCGCCATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 UbcD4 FBgn0015321 FBtr0076395 3 1 1 90 3L 9692207 9692452 AATCCACCAAAGGTACGCT 59 9692504 9692524 TGTCCTTTAAGATGTCCAAGC 58 NA Drosophila melanogaster 61 CG34455 FBgn0085484 FBtr0112761 2 1 1 60 3L 9353836 9353854 TATGTGGGAAACAAGGTGG 57 9353949 9353967 GTGGATCCACATCGAAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5280 FBgn0035952 FBtr0076552 1 1 1 179 3L 8982909 8983036 GATCCGATTGCTTGTCAAGG 59 8982749 8982767 TTCTTACGCTTGGCATTGC 59 NA Drosophila melanogaster 61 CG5660 FBgn0035942 FBtr0076560 2 1 1 176 3L 8957551 8957640 CCTTAAAGATGCGGCTAATGAG 59 8957396 8957416 AGATTCCCGGTTACATTTGGT 59 NA Drosophila melanogaster 61 CG13306 FBgn0040828 FBtr0076592 3 1 1 170 3L 8742807 8742826 CAAAGAACTGCCGTAAATGC 58 8742599 8742617 TCAGGTAAACGACCGTCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076670 1 1 9 279 3L 8351841 8351862 CGTATTGTTTCACATTGGTGAC 58 8350990 8351118 TGATCTTCTGGGCCATCTC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32368 FBgn0052368 FBtr0076749 1 1 1 61 3L 7908628 7908646 ATCCGACAAGGAGAAGAGG 58 7908671 7908689 TCCTCATTTCGTGCTCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4d8 FBgn0015033 FBtr0076832 1 1 1 80 3L 7487058 7487137 TTCAAATACACCCATTCCGT 57 7486997 7487016 ATGTACACCAAAGATTCCGA 57 NA Drosophila melanogaster 61 Cpr65Ea FBgn0035735 FBtr0076929 2 1 1 128 3L 7079582 7079666 GTACAAGCTCCTTCTCGTC 57 7079472 7079490 GCCTGCTCGATATCATAGG 57 NA Drosophila melanogaster 61 CG8641 FBgn0035733 FBtr0076931 3 1 1 224 3L 7055136 7055467 GTTATGCTCGGCTCATCAC 58 7054118 7054137 GACGAGGATGAAGAGATCCC 59 NA DesignRelaxed Drosophila melanogaster 61 vvl FBgn0086680 FBtr0076944,FBtr0300260 2 2 2 79 3L 6784210 6784228 CCATCATACGCACCATCTG 58 6784271 6784289 AGAGATGCGACATCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 D19A FBgn0022935 FBtr0077016 3 1 1 211 3L 6181317 6181336 ATCAGATGACTCCGAAGACG 59 6181064 6181145 TAGTGAAACCTTTCTTGCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 Lcp65Aa FBgn0020645 FBtr0076995 1 1 1 82 3L 6144436 6144454 AAATCCATCCTTGTGCTCG 58 6144500 6144518 ACCAGGTCAACAATCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13295 FBgn0035674 FBtr0077065 3 1 1 96 3L 6068062 6068142 CTGAACCAAGATCTGACAACG 59 6067986 6068004 TCTCGTTGGTGTTCCTCTG 59 NA Drosophila melanogaster 61 Ppat-Dpck FBgn0035632 FBtr0077120 1 1 1 94 3L 5761226 5761311 CATGACGAAGGGAAAGACG 58 5761150 5761169 GCGTATCATCTATGTCCACC 58 NA Drosophila melanogaster 61 CG10630 FBgn0035608 FBtr0077152 1 1 1 80 3L 5491875 5491895 GATGAAGAAGGCATTGATCCC 59 5491647 5491836 TTCTTCAAATTATCTGCGAGCG 59 NA Drosophila melanogaster 61 CG10673 FBgn0035590 FBtr0077180 2 1 1 60 3L 5132030 5132053 CACATCTAACATCCTCATCAATCC 59 5131993 5132014 GAAGTCAATCAGAATGACATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4597 FBgn0035594 FBtr0077162 2 1 1 60 3L 5122827 5122845 AGTTCAAGTGCCCTTTCCT 59 5122868 5122887 ATCTGACAGCTTCCTTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13705 FBgn0035582 FBtr0073352 2 1 1 100 3L 4896883 4896902 TCTAGCAGACATCGTCTTGG 59 4897036 4897054 TAATCCGTGGCAATGGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32238 FBgn0052238 FBtr0073344 1 1 1 60 3L 4649693 4649713 CCCTCTATTTGGAAGGAACTC 57 4649733 4649753 GATATGGCTCCAAACAAACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33777 FBgn0053777 FBtr0091778 2 1 1 80 3L 4554688 4554769 ACCTGTCCCTTTAATGACGA 58 4554627 4554648 TGGGAGTACTGAAGTTACTTGG 59 NA Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 1 1 1 83 3L 4471710 4471839 GCCGGTCTAAGATATTATTCGA 57 4471882 4471901 GTAGTTGTAGCCAGATTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 3 2 2 89 3L 4154452 4155250 GACTTGAATCGGGAAGCTG 58 4154381 4154399 TTCCGACAGATCAAATGGC 58 NA Drosophila melanogaster 61 CG1136 FBgn0035490 FBtr0073203 3 1 1 90 3L 4057406 4057483 ACAGTCATCGGAACTGAGG 59 4057536 4057555 TCAGTATCCTGTATCCCTGC 58 NA Drosophila melanogaster 61 Gr63a FBgn0035468 FBtr0114512 2 1 1 81 3L 3896330 3896408 CCGGAATTTAAGCCGAGTG 59 3896267 3896290 CGATGGGTAATACTCCAATAATCC 59 NA Drosophila melanogaster 61 Awh FBgn0013751 FBtr0073156,FBtr0073155 3 2 2 131 3L 3860363 3860381 GTATGGTTCCAGAACTCGC 58 3860751 3860900 ATAGAGGATTCATGAGTCGGG 58 NA InUTR Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 3 1 1 60 3L 3804764 3805840 CATTAAAGCTCCTGATCAGGT 57 3804724 3804745 GCTCTTCTCTTGTATCAAACGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123,FBtr0073122 2 2 2 80 3L 3113727 3113884 TTGTTGATGCTTAACTCTAGCC 58 3113668 3113688 GACATAAAGATGACGCAAACG 58 NA Drosophila melanogaster 61 CG16976 FBgn0035366 FBtr0300098 3 1 1 126 3L 2666644 2666891 CATTCTGCCGAAATGTGGA 58 2666536 2666554 GTAGCGAACCATCAAGGTG 58 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 3 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 Cyp4d20 FBgn0035344 FBtr0072967 1 1 1 80 3L 2478195 2478213 GATCCCAGGTCCCATTTCC 59 2478064 2478154 CATCCGATAATGTTCTCTGCTC 59 NA Drosophila melanogaster 61 obst-I FBgn0052304 FBtr0072880 2 1 1 60 3L 2268107 2268127 TGCAAAGATAAGCACCTTCAG 59 2268149 2268167 GGTTGGCATCGAAGTAGGT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 osm-1 FBgn0035317 FBtr0072873 2 1 1 95 3L 2230535 2230609 TCTATGACAGTATGGGTCGT 57 2230667 2230685 GTCCATTCGGACTACAAGC 58 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0301625 1 1 3 102 3L 1798834 1798855 CATTTGGCATTCCATTTCAGAG 58 1798918 1798994 TTCGATTTGGGCTCCTCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13930 FBgn0035256 FBtr0072803 3 1 1 134 3L 1671122 1671140 AAGTGCTCCACGAACTACC 59 1670946 1671024 GATACGAATGCACCAGTCG 58 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123 3 1 5 163 3L 1664020 1664548 ATTCTCGAGAAGCAGGGAC 59 1662337 1662355 GCTGTGGTTCTTACTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17249 FBgn0035249 FBtr0072810 3 1 1 60 3L 1647023 1647044 TGTAGAGGAGAAAGACGATGAG 59 1646984 1647004 TTTCTCTATTTCTACGGGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 3 2 2 81 3L 1644054 1644073 GCGCTTCTGGATACTTACAG 58 1643936 1644014 CAGTTTAAAGACCACCATACCTC 59 NA Drosophila melanogaster 61 CG13926 FBgn0035243 FBtr0072823 2 1 1 143 3L 1617770 1617788 CAGCCAGGAGATCTCACAC 59 1617560 1617580 GCGTAGTTGAAGAAGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32319 FBgn0052319 FBtr0072714 1 1 1 60 3L 1471813 1471831 GACGAATCACAGCTCAAGG 58 1471771 1471789 AGTACGGTTCGGAAAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9149 FBgn0035203 FBtr0072667 3 1 1 61 3L 1303043 1303062 CATCCAGAATGTCTGACGTG 58 1303086 1303198 ATTGAAGCTACCAATGGGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Reg-2 FBgn0016715 FBtr0072561 3 1 1 114 3L 606428 606446 CTCCAATTCCGAACCACTC 58 606275 606350 TCATCTTGTACCAGTTGGC 57 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 3 2 2 84 3L 594777 594795 ACATACGATCGGTGTCCAG 59 594842 594931 GTTCCTTGGAGGTTGAAGTC 58 NA Drosophila melanogaster 61 CG17181 FBgn0035144 FBtr0072563 1 1 1 115 3L 585102 585120 ATCCTCAACAGCACTTCGT 59 584945 585024 TCCATGATTGATCTGTGCGT 59 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 3 2 2 81 3L 571003 571086 CGATTTCCACACTGTGCAG 59 571129 571149 GATCGTGAACGTCATGTTCTC 59 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 3 3 3 94 3L 213968 214042 TATCTCTTGCGGATGGTGAG 59 214099 214117 GTTGTCCGACGATATCACG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3316a FBgn0082972 FBtr0113516 1 1 1 60 2R 17214315 17214334 GCTCAGTTGCAAGTGATACG 59 17214356 17214375 ACTTGTAGTCAGCGTTATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30428 FBgn0050428 FBtr0072451 2 1 1 80 2R 21141273 21141349 GAATGGAAACGGGTTTGGA 58 21141392 21141411 AGCCTTAGAGTTCTCTAGCC 58 NA Drosophila melanogaster 61 CG34038 FBgn0054038 FBtr0299878 2 1 1 139 2R 21056594 21056615 CGTCTTAATTTACTAAGCCACG 57 21056714 21056796 ATAACTGAAAGGAAACCGGC 58 NA Drosophila melanogaster 61 CG3829 FBgn0035091 FBtr0072396 2 1 1 80 2R 20876131 20876207 AACACCATTCTGGAGAACCT 59 20876249 20876268 GTCGTACTTAGGATCAGGGT 58 NA Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113119 2 1 3 132 2R 20849260 20850515 TTGATAAGATGAAACTGCCTGC 59 20849149 20849167 ATGGCACCAGTATGGTGTC 59 NA InUTR Drosophila melanogaster 61 CG3880 FBgn0035057 FBtr0072371 1 1 1 132 2R 20649661 20649735 CCCGATTTGATCAGTGGTC 58 20649831 20649849 TTAATGTGCAGTGGGTAGC 57 NA Drosophila melanogaster 61 Cpr60D FBgn0050163 FBtr0072334 1 1 1 152 2R 20550894 20550912 TTGAAACCCGTTTAGTGGG 58 20550702 20550720 CAGATCCTCCTCACTGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir60b FBgn0259185 FBtr0299669 3 1 1 60 2R 20403569 20403588 CCCACCATACTATTCGTCCT 58 20403611 20403629 GCAGACACTCCAGAAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15874 FBgn0035004 FBtr0072356 3 1 1 62 2R 20320108 20320127 ACCCTCCATGTTATCAGGTG 59 20320065 20320083 CTGGCCAAAGGTTCAATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zfrp8 FBgn0021875 FBtr0072253 3 1 1 121 2R 20021701 20021719 TTCCTGGCTCAGCTATACG 59 20021803 20021879 AGGACTGTGAAATTGCTTGC 59 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 3 1 3 69 2R 19858113 19858191 TTTGACATACCGGATAGGGC 59 19858220 19858241 CGTGTTTGGTATTACTTGTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135,FBtr0273356 1 2 2 93 2R 19792044 19792062 ATGTTTGGCTTCAGCTTCG 59 19792119 19792194 TATCGCACGTGTCTATGCT 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 skpF FBgn0034863 FBtr0072022 2 1 1 61 2R 19346184 19346204 AGTCATCAAATTGCAGTCCTC 58 19346143 19346161 ACTTGGCAGTCTCGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 1 2 2 164 2R 19246363 19246381 AAGATGTCGCAGATCGGAG 59 19246567 19246587 CTTGGTCTTCAGGTTCTTCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9895 FBgn0034810 FBtr0071986 2 1 1 101 2R 18901284 18901302 GACTCTTGGAGTCTCCGTC 59 18900670 18900688 ATTGCTATAGCCAACTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 1 2 2 80 2R 18798377 18798395 CGATCGACCTGTACTGGAC 59 18798438 18798513 TGATAAGACTGGGCTGTGAC 59 NA Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071894 3 1 2 118 2R 18729543 18729562 TCGATCTGTCACCCAATCAC 59 18729643 18729742 GCGATTGTGCTTATCAGCC 59 NA Drosophila melanogaster 61 CG30274 FBgn0050274 FBtr0071888 1 1 1 93 2R 18712765 18713014 AAATATTCGTTCCCGACGA 57 18713071 18713089 GTAATGACGCTAAAGCAGC 57 NA Drosophila melanogaster 61 blw FBgn0011211 FBtr0071883 3 1 1 91 2R 18687974 18688084 CAGACTGGTAAGACCGCTC 59 18688138 18688157 ATGCAGTACAGCTTCTTGGA 59 NA Drosophila melanogaster 61 CG30273 FBgn0050273 FBtr0071866 2 1 1 147 2R 18554819 18554896 GTGATCATACAACATCAAGCTG 57 18555004 18555022 CAACGATGCATAGAATGGC 57 NA Drosophila melanogaster 61 CG42566 FBgn0260768 FBtr0301270 1 1 1 80 2R 18550361 18550449 CTTACCTTCCTTTGGCCCT 59 18550493 18550511 TTGCAAGATGGACAGTGGT 59 NA Drosophila melanogaster 61 CG34203 FBgn0085232 FBtr0112396 3 1 1 150 2R 17169142 17169161 TTCAGCAAAGAACAAGTCGA 58 17168952 17168971 TGATGTGAAACGATCTTGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rgk3 FBgn0085426 FBtr0112646 1 1 1 117 2R 17159683 17159701 AAATCAAACGCCTTCCTGG 58 17159781 17163660 TGATGATACCTCCCTTGGAG 58 NA Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 2 2 2 80 2R 17010150 17010168 TTCACGGTCTTTGACAACG 58 17010209 17010287 GTTGGTGTCATAAATGATGACG 58 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 Mgat1 FBgn0034521 FBtr0086259 2 1 1 80 2R 16448046 16448066 CTGAAGCACATTAAACTGAGC 57 16447929 16448006 ATCGTAATTGTCCTTCAGCAG 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 2 4 4 80 2R 16355268 16355717 AGCTGGACATACGATTTGCT 59 16355760 16355778 CCTTGACAGTCTCATGCCT 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 2 2 2 91 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198934 16198952 TGATCAGACTAATCCGGCC 59 NA InUTR Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086342 1 1 2 157 2R 15671384 15671470 CGCAAGCCAACATAGACAG 59 15671245 15671263 CAGAATGCACTGTGAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Or56a FBgn0034473 FBtr0086344 1 1 1 80 2R 15657818 15657902 GAGGAGATGGATATTACCCGA 58 15657758 15657778 CATTTGCCAGAAGGTTAACTC 57 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473,FBtr0086474 3 2 2 105 2R 15559345 15559420 AGCAGTCGAATATCCAATACG 58 15559487 15559505 ATAGCTATCAGGCGTGGAG 58 NA Drosophila melanogaster 61 CG15125 FBgn0034463 FBtr0086471 3 1 1 98 2R 15546239 15546257 CGGAGACTTCTGTAGGGAC 58 15546316 15546426 TTTGACGGGTACTTAAATCCCA 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 2 2 4 81 2R 15196583 15196602 ATTTGGACAAGTCGCTTACG 59 15196010 15196540 ACGAAGATCACTGTGGAGAC 59 NA Drosophila melanogaster 61 CG7229 FBgn0034423 FBtr0086511 2 1 1 81 2R 15147563 15147635 CTCTAGCATGGCATCTTGC 58 15147680 15147698 GGGATGCGGTATAAACTCG 58 NA InUTR Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504,FBtr0086503 1 2 2 80 2R 15099769 15103931 AAGAGCTTCATAGGTACGC 57 15103972 15103993 ACATAGTTGATTATAGCCACCC 57 NA Drosophila melanogaster 61 CG15115 FBgn0034413 FBtr0086597 3 1 1 73 2R 14923494 14923512 AATATTCGTTGTACCGCGT 57 14923372 14923391 ATAAATCATCGCCAGCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18190 FBgn0034403 FBtr0273238 3 1 1 81 2R 14740147 14740167 CTTCAAGAAGATCGAAGAGCT 57 14740026 14740044 CAGGTTAATGCAGTTGGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG18190 FBgn0034403 FBtr0273238 2 1 1 74 2R 14740172 14740190 GTGAACAACATGGTCCACG 59 14740056 14740074 CATCATCTGGCAGTAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086640,FBtr0086639 3 3 3 64 2R 14663682 14663700 TTCGGAGGCCATGAATCTG 59 14663636 14663654 TGATGATCTCGGCGAAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 1 2 2 80 2R 14055629 14055716 GCCAGAGCGTTTCAAATCC 59 14055758 14055778 TTAAGCTCCTTCTTCACTCCC 59 NA Nonspecific Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 3 3 3 93 2R 14007593 14007613 CAGCAACAGTACGAGTAACAC 59 14007460 14007540 GAAGTTGACCTCAAAGTCCAG 58 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 1 3 3 92 2R 14007593 14007612 AGCAACAGTACGAGTAACAC 58 14007460 14007539 GAAGTTGACCTCAAAGTCCA 57 NA Drosophila melanogaster 61 CG30110 FBgn0050110 FBtr0086820 3 1 1 60 2R 13768088 13768109 CGATGTACCATTCATGATTGAG 57 13768049 13768068 GTACTGCTTCAACTGCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6459 FBgn0034259 FBtr0086892 3 1 1 89 2R 13559431 13559450 AGGTGGACATCATAAAGGGC 59 13559303 13559379 AGACATCGTTGTACTCGCC 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994,FBtr0290299 2 2 7 113 2R 13260659 13261334 AACTGAAGATGACAAGGTCG 58 13261410 13261428 AGGACAATCGGTATGTGGT 58 NA Drosophila melanogaster 61 CG30458 FBgn0050458 FBtr0086999 3 1 1 136 2R 13046378 13046500 CCATCTCCTCAAGATGAAATTCC 59 13046264 13046283 GAATGTAGCTCTTCACAGGC 58 NA InUTR Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 1 3 3 80 2R 12905299 12905582 CATTGCCTTAACCAGAATCCG 59 12905239 12905257 GTTGTTCTCCATGCCATCG 59 NA Drosophila melanogaster 61 CG6796 FBgn0034177 FBtr0087057 1 1 1 80 2R 12889556 12889574 TTTACAGCAAATCCGGACG 58 12889618 12889697 TGATCCATCCCTGTATGGC 59 NA Drosophila melanogaster 61 CG34191 FBgn0085220 FBtr0112384 2 1 1 60 2R 12839925 12839944 GACTGCTGGTAATGTGTTCC 59 12839967 12839985 TCGATCTCTGGGTATGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0087049,FBtr0112819,FBtr0087048 2 3 3 80 2R 12827712 12828411 TGCTAACTGTCCAGATCAAGG 59 12828452 12828471 TCACCTTCACATAGGGATCG 59 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087124,FBtr0087123 3 2 2 68 2R 12458148 12458167 CATCATTGGCGTCTACAACG 59 12457858 12457876 TAGTGACCGATCATCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CheB53b FBgn0261293 FBtr0091479 2 1 1 80 2R 12355959 12356036 AGATCGAGTTGAACTACAAGGA 59 12356077 12356095 TTGACCAACATGTTGAGCG 59 NA Drosophila melanogaster 61 CG15710 FBgn0034120 FBtr0087169 3 1 1 60 2R 12235756 12235774 TGCCTACAAGGTCCATCTG 59 12235714 12235732 CACATCCTTCATCATGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nox FBgn0085428 FBtr0112650 2 1 1 80 2R 12200863 12200881 TTCATATCCCGCGCTATCC 59 12200924 12201006 GAAGTTCAGGCATTGTCCAC 59 NA Drosophila melanogaster 61 Tsf3 FBgn0034094 FBtr0087130 2 1 1 83 2R 12115392 12115410 TGATCTTCGAGGTGCAAGG 59 12115454 12115543 GCTTCAAAGTAATTAGCCAGGA 58 NA Drosophila melanogaster 61 Jhedup FBgn0034076 FBtr0087222 1 1 1 80 2R 12004990 12005065 TCTACAGACCGAAGAATCGC 59 12005107 12005126 CAGATCCGCTAAAGAAACCG 59 NA Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 1 2 2 64 2R 11900057 11900075 CTCTTGGATAACCACGGCT 59 11900102 11900179 AGCCCAAATAGTGATAGGGA 57 NA DesignNoJunction Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 1 3 3 80 2R 11812822 11812840 ACTCTGCCGTTAGTAGCTC 58 11812698 11812781 AAAGATGTTCTGTATCCTGCTG 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301313,FBtr0301314,FBtr0100388,FBtr0100387,FBtr0087315 1 6 7 150 2R 11651087 11651161 GCAAGATCAAGGGTGACTG 58 11650955 11650973 AACAACTCGTTCCAATCGG 58 NA Drosophila melanogaster 61 CG30091 FBgn0050091 FBtr0087277 2 1 1 81 2R 11568342 11568420 CACTCAGCTCACAGTTACC 57 11568464 11568483 CACGTTGTATATCTCGTGGG 58 NA Drosophila melanogaster 61 CG34186 FBgn0085215 FBtr0112379 3 1 1 125 2R 11032888 11032910 GGCAATGACCTATATTTGTGGAG 59 11032586 11032692 AAGACAACAAGACGCTTGG 58 NA Drosophila melanogaster 61 Ercc1 FBgn0028434 FBtr0087448 1 1 1 201 2R 10741048 10741124 TCCACACCAGAAGCTACTC 58 10741289 10741307 CTATTTGCTGAGGAACGGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG30076 FBgn0050076 FBtr0087513 2 1 1 60 2R 10432350 10432371 AAAGAAATACCGTGAACGAGAG 58 10432311 10432329 CTTGTTGTGGTGTTTCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dh44-R1 FBgn0033932 FBtr0087485 3 1 1 80 2R 10271174 10271192 TATACCAGGGACCTGTCTG 57 10271235 10271482 GCTTTGTGATTAGAACCCAC 57 NA Drosophila melanogaster 61 Arc1 FBgn0033926 FBtr0087560 1 1 1 60 2R 10247466 10247485 TAGAAGGTATCAGCGACGAG 58 10247425 10247443 GCCATACCGTAGAACAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582,FBtr0087584,FBtr0087583 2 3 3 83 2R 10037785 10037803 CGTAAGCGAAAGATGGACG 59 10037313 10037738 CTGGGCATCATTGTGAGGA 59 NA Drosophila melanogaster 61 CG30482 FBgn0050482 FBtr0087602 1 1 1 289 2R 9888342 9892326 AAACAGATGTCGTCGTTGC 59 9885170 9885188 TTTGGAATCAAGACCCACC 57 NA DesignRelaxed Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087757,FBtr0087758 3 2 2 122 2R 9136955 9136973 CGGTGTGAGCTTGAATGAC 59 9136782 9136800 ATATGCAGTTCGGTGTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4630 FBgn0033809 FBtr0087765 2 1 1 88 2R 9103754 9104116 TACACTAGGTGCCAACTGG 59 9103684 9103703 TGAACGTGTAGATGACTGCA 59 NA Drosophila melanogaster 61 CG34235 FBgn0085264 FBtr0300636 2 1 1 60 2R 9099600 9099618 ATTCGTGGACATCATCCTG 57 9099503 9099576 TTTCCGTCTTATCCATGGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 2 2 2 80 2R 9094842 9094916 GGCCGAAGATCGTAATACC 57 9094960 9094978 TTTAGCGCTTCAATTTCGG 57 NA Drosophila melanogaster 61 GLaz FBgn0033799 FBtr0087772 3 1 1 93 2R 9052243 9052261 TTTGAGCCGTACAACAAGG 58 9052110 9052187 TCGGATTACCAGTTATGCGA 59 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087799 1 1 3 106 2R 8838844 8839685 CACAATGGACAACACCTGG 59 8838756 8838774 ATCGACCCACATAGATGGG 58 NA InUTR Drosophila melanogaster 61 CG30488 FBgn0050488 FBtr0087818 2 1 1 81 2R 8735312 8735405 CGGAAATTCATGCAGTAGGTG 59 8735251 8735269 AGGATGCCAGTCTTCAAGG 59 NA Drosophila melanogaster 61 Cyp9h1 FBgn0033775 FBtr0087820 3 1 1 110 2R 8729387 8729407 AAGATAACGAGTTCTTCCGCA 59 8729168 8729315 TGCGGAGAACCTTCATCAG 59 NA Drosophila melanogaster 61 spt4 FBgn0028683 FBtr0087840 2 1 1 80 2R 8521467 8521552 AAGATTGTCCCGCTTTACTC 58 8521593 8521613 TTCATGTCACGTAAGGTAGAC 57 NA Drosophila melanogaster 61 wash FBgn0033692 FBtr0087989 2 1 1 60 2R 8069065 8069084 AGTTCGGTGATTTACCAGAG 57 8069104 8069125 TGCACTATTATATCCTGCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 128up FBgn0010339 FBtr0087976 1 1 1 82 2R 7926100 7926186 GCCAAGGAATTTAAATATGCGC 59 7926229 7926247 TTGAGAACGTGTTCGATGC 58 NA Drosophila melanogaster 61 CG8321 FBgn0033677 FBtr0087975 3 1 1 99 2R 7923203 7923286 GTTCCAAGAAACGTTTCCG 57 7923348 7923367 AAGTACATGAAGACCGTGAC 57 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 2 4 4 81 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269384 7269466 CACCGTGATCAACCTTATCG 58 NA Drosophila melanogaster 61 Cpr47Ef FBgn0033603 FBtr0302719,FBtr0302718 3 2 2 73 2R 7157768 7159892 CTCTTAAGTGGGCTCTGGT 58 7157713 7157732 GGGCAGGTATTTGTTATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088355 1 1 3 112 2R 6243852 6243934 CGATACAATACGATACACATGAGC 59 6243763 6243783 AAACATAGCTCTTTCGGAAGC 59 NA InUTR Drosophila melanogaster 61 CG30008 FBgn0050008 FBtr0088380 3 1 1 86 2R 5777808 5777826 AAACCTTACGAGCTCAAGC 58 5777874 5777953 GTACAGGACCTCTTTGATAGC 58 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088487 2 1 4 60 2R 5717354 5723957 ATAACAATTCAGCGAACGACG 59 5717314 5717333 TTTGAATCTGGTCGTGATCG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088493 2 1 2 80 2R 5707389 5707407 AGTTCTTCGACTCCAACGG 59 5700152 5707347 CGAAGTTCTTCAAGGAAGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 tsu FBgn0033378 FBtr0088567 3 1 1 111 2R 4998416 4998434 GACATTGACAATGCGGAGG 59 4998598 4998616 TACTGTCGCTTCCAAATCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18316 FBgn0033261 FBtr0088782 3 1 1 60 2R 3994242 3994261 ACTGGCCTCCAATCATATGG 59 3994282 3994302 CGTGAATATTTGAAAGGACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779,FBtr0088939 1 3 5 80 2R 3572525 3572547 CTGTGATAACGAATAGCAATCCC 59 3571794 3572488 AATGAATGGCACCTTTATCCTC 58 NA Drosophila melanogaster 61 CG12107 FBgn0033209 FBtr0088924 2 1 1 148 2R 3562157 3562237 AGGACAAGGAAGAGTTCCTG 59 3562418 3562436 GTACAGGTAGACGATCCCG 59 NA Drosophila melanogaster 61 CG2065 FBgn0033204 FBtr0088922 1 1 1 81 2R 3551794 3551870 GCTGCTGGATTCAAGAAAGAG 59 3551913 3551931 TCAGTGTTCTGGGACAGTG 59 NA Drosophila melanogaster 61 CG1602 FBgn0033186 FBtr0088960 2 1 1 87 2R 3406000 3406018 AGAAGAATCCGTCCAGGAC 58 3405875 3405951 TGGATGAAACTTGTATGTGGG 58 NA Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 3 2 2 80 2R 3331901 3331920 ACTGTGAGGAGAAGATTCCG 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific Drosophila melanogaster 61 so FBgn0003460 FBtr0088970 3 1 1 103 2R 3313396 3313415 GTACTGAGGGACTGGTACTC 58 3313481 3313702 AACCAATTGGAAACCTGCG 59 NA Drosophila melanogaster 61 Tsp42Ed FBgn0029507 FBtr0086181 1 1 1 81 2R 2898219 2898237 CGTAGTCTTCCTGGTAGCC 59 2898087 2898174 GACCACAGAGTACGAGGTC 59 NA Drosophila melanogaster 61 CG3420 FBgn0033100 FBtr0086135 1 1 1 170 2R 2644563 2644581 GTAGTGGTACGACCTTGCA 59 2644349 2644430 GAACTGTAGCATGCCTTGAG 59 NA InUTR Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0086136,FBtr0301420,FBtr0301423 3 6 7 80 2R 2619686 2619759 CGTTGTCGTATTCTTCTACGC 59 2619626 2619646 CATTCGTCATCGATGTTCTCC 59 NA Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 2 2 2 131 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579725 2579803 TGTAAGCCATCTATAGTATCCGG 59 NA Drosophila melanogaster 61 Trap1 FBgn0026761 FBtr0086149 3 1 1 163 2R 2521449 2521529 GAGATCAACCCAAAGCACC 58 2521304 2521322 AGCAGAGTGTTCATGTTGG 58 NA Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0112405,FBtr0302826 3 2 2 93 2R 1937564 1937582 CTCATGGCCTTCCTGTCTC 59 1937489 1937507 ATGATGTGGTGTTGAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0302826 3 1 2 93 2R 1937716 1937790 TGTACAATCTGACAGCTGCA 59 1937642 1937660 ACTTCGAACTCAAGGGTCG 59 NA InUTR Drosophila melanogaster 61 Ir41a FBgn0040849 FBtr0299925 2 1 1 80 2R 863357 907828 TCCAAATTGATTCATCTGCCG 59 907869 907888 TAAGCATACCAAGAGCACCA 59 NA Drosophila melanogaster 61 snoRNA:Me28S-A2486 FBgn0086033 FBtr0114309 2 1 1 97 2L 5437713 5437732 ATTTATCGCGGCATTGTGTC 59 5437635 5437653 TCGTCAGATCGTCTGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A2486 FBgn0086033 FBtr0114309 1 1 1 96 2L 5437713 5437731 TTTATCGCGGCATTGTGTC 59 5437635 5437653 TCGTCAGATCGTCTGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His-Psi:CR31754 FBgn0051754 FBtr0085891 1 1 1 60 2L 21405784 21405802 CGCTCAGGACTTTAAGACG 58 21405826 21405844 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33315 FBgn0053315 FBtr0081172 2 1 1 60 2L 19075279 19075297 GCTACGACGTATTCCACCA 59 19075237 19075255 ACCCATCAAGGTTTCTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 1 2 2 80 2L 9789414 9789432 GCCTCTACTGACAGATGAC 57 9789292 9789371 ACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 2 1 1 155 2L 22443083 22443101 CTAGGAATAGGGTGGGCTG 59 22443219 22443297 GCTCCATTAATCGATTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG3651 FBgn0032974 FBtr0085937 1 1 1 81 2L 22124151 22124170 CACGTTGTCGAGATCTTTCC 59 22124214 22124797 ATGTGACCAACCTTTCCCA 59 NA Drosophila melanogaster 61 CG8678 FBgn0032935 FBtr0081487 3 1 1 140 2L 21214637 21220267 GACTTTACTTCCCTGTCCG 57 21214515 21214533 TAGTGAGCTGTTGAACAGG 57 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404 3 1 2 139 2L 20645740 20645758 TTTACACTCGACGGACGAC 59 20645347 20645421 GATTTCAAACGGTACCTGCC 59 NA InUTR Drosophila melanogaster 61 CG13962 FBgn0032824 FBtr0081314 2 1 1 161 2L 19814403 19814481 CTGCTGTAAGCCTTTCGTG 59 19814260 19814278 GTTCAAGCGGAACTGTGTC 59 NA InUTR Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081317,FBtr0081316 3 2 2 74 2L 19795573 19795591 CAAAGACGAACTGACCACC 58 19795021 19795040 AATTTACGAGTGGCACAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 1 2 2 80 2L 19729960 19729979 GTACTGGACGTCTTCCAGAC 59 19730020 19730108 GAAGTGGTATTGATCCTCGGT 59 NA Drosophila melanogaster 61 CG10194 FBgn0032790 FBtr0081285 3 1 1 112 2L 19489788 19489806 GAGAAACGAGTTCAGTGCC 58 19489632 19489712 GAGCTAGGGATGGATCCAG 58 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 2 3 3 255 2L 19436954 19437040 CGTGATCTGATTAAGCGGT 57 19436541 19436559 TCTGTGTTTCTGGCTCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 fon FBgn0032773 FBtr0301287,FBtr0081222,FBtr0081223 2 3 3 125 2L 19383978 19383996 AAGTGGTTGGAGCTAGCAG 59 19383753 19383890 TGGAATCGTACGAGTTCTGG 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081229 3 2 4 289 2L 19183450 19183519 GGCCAAATTCCACTTAGCTG 59 19183127 19183147 GGTATCTACGAGTGTTTCAGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 l(2)37Ce FBgn0086446 FBtr0081157 3 1 1 133 2L 19132351 19132370 TTCCTTCTCACCTTCGTGAG 60 19132533 19132551 ACGAGAAGGTGATGTCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17343 FBgn0032751 FBtr0081151 1 1 1 60 2L 19065037 19065055 TCTCAAGGAGTACGAGCAG 58 19065079 19065097 AGTAAGCAATTGTTGGCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Phlpp FBgn0032749 FBtr0081149 1 1 1 83 2L 19061825 19061843 CAGTTGCGTCTTACCAAGC 59 19061886 19061969 GAGAATGAGCTCTAACACATGTG 59 NA Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 1 2 2 124 2L 19047033 19047156 CTATTCCACTGAAGACGAGG 57 19047241 19047261 GTATTGCCCGATCCATATCAG 58 NA Drosophila melanogaster 61 CG31752 FBgn0051752 FBtr0081119 2 1 1 98 2L 18840974 18840994 TCTAACCATGAAGACCATGCT 59 18840730 18840919 GTGTTCTATGACTGGTTTCTTCTC 59 NA Drosophila melanogaster 61 tos FBgn0015553 FBtr0081131 3 1 1 80 2L 18681089 18681164 CAATCTTGAGGTAGATGACGA 57 18681029 18681049 GGGTTGTAGATAAACATGTGC 57 NA Drosophila melanogaster 61 Mst36Fa FBgn0086681 FBtr0302225 1 1 1 80 2L 18675419 18675576 GCGAAGAAAGGTCTAAAGGG 58 18675358 18675378 TCATTTCAGGCTTTGTATCGG 58 NA Drosophila melanogaster 61 CG7094 FBgn0032650 FBtr0080990 3 1 1 60 2L 17555049 17555068 CATATACCATACCGCACGGA 59 17555008 17555031 CATTTATAGAGGCATAGCGAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15142 FBgn0032645 FBtr0080995 2 1 1 108 2L 17498456 17498474 TACACCAAGTACATGCAGG 57 17498311 17498386 CATCGAGACCTATAGATGTGC 57 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997,FBtr0080996 2 2 2 83 2L 17487191 17487211 AAGTATCCATTAACCGTGCTC 58 17487063 17487146 TGTTAGGTGAACCTCCCTC 58 NA Drosophila melanogaster 61 CG6380 FBgn0032632 FBtr0080970 1 1 1 60 2L 17291272 17291294 CTCCTGCTCGTATATGTAAATCC 58 17291234 17291254 GTCTCTTTCTTAGAAGTGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34169 FBgn0085198 FBtr0112360 1 1 1 60 2L 17173872 17173890 AAATGAATCCATGGCCCAC 59 17173914 17173932 ATATTCGCCATTGGTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 3 3 3 80 2L 16666840 16666932 CGTATCAACTTATTTCGGAACG 58 16666781 16666801 CCTCCTCAAAGTAGCTTATCC 57 NA Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 2 2 2 94 2L 15117482 15117563 TAAGGATAGGTGCTGGTTCC 58 15117620 15117638 AAGCATTGTTACTGGGCAC 58 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 1 2 3 80 2L 14391996 14392246 ATCCTATTATCCACCCGTTGG 59 14391936 14391955 TAACCTGCAACGGAATTGTG 59 NA Drosophila melanogaster 61 l(2)34Fc FBgn0261534 FBtr0080640 2 1 1 212 2L 14349758 14349776 TCCGTTTGTTGGTTCTTGC 59 14349495 14349513 TCATGAAGCCAAGGAACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559 1 1 2 75 2L 13933401 13933419 CAAGCAGATCGTGAAGGTG 58 13932953 13932971 GACTTCACTTCTCGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9267 FBgn0032524 FBtr0080519 2 1 1 89 2L 13444561 13444645 CGAATTGGTGCGATATCCA 58 13444490 13444510 GGTATCCAGATGGTGTATCTC 57 NA Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 3 1 1 113 2L 13071858 13073282 TGTTCGTATGTGTAATGGTTGG 59 13071766 13071786 GGACGAAGATAATGATACCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 3 2 2 94 2L 13014016 13014034 ATCGAGGATAAAGCGACTG 57 13013875 13013961 GGTTGGTAACATAGATTTCGTG 57 NA Drosophila melanogaster 61 CG5525 FBgn0032444 FBtr0080411 2 1 1 80 2L 12690665 12690685 GGTCAGTATTTCGTCGATCAC 59 12690542 12690626 CTGAAGGTGTTGACAATATCGT 58 NA Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 2 1 1 60 2L 12452901 12453021 ATTGGAAAGGCGTGATGTG 58 12452859 12452877 TGTCCGAGTTACAATGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 crol FBgn0020309 FBtr0080260,FBtr0080263,FBtr0080261 2 3 4 139 2L 11797737 11797845 AGTGAAACCGATCATAATTCCC 58 11797619 11797637 TGAGCGTAGAGGTAACCAG 58 NA Drosophila melanogaster 61 CG12307 FBgn0032370 FBtr0080266 3 1 1 60 2L 11651834 11651855 GGGAAAGTTTATCCGGTATTGG 59 11651795 11651813 GATGAGCACCTAAGGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 1 2 2 80 2L 10766272 10766405 CAGACTGTAATCCAGCCGA 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 2 2 2 81 2L 10745706 10745796 CTCTTCGATCCACCAAACG 58 10745643 10745667 GAGATCTTCTTATGTCATCTGTGTC 59 NA Drosophila melanogaster 61 CG5355 FBgn0032242 FBtr0080047 2 1 1 80 2L 10412247 10412267 GCGGAAATAACTTCCAAACTG 58 10412125 10412208 GCCTTCATTGGTAATGTAATCG 58 NA Drosophila melanogaster 61 pim FBgn0003087 FBtr0080001 1 1 1 80 2L 10363131 10363214 CATTAATTTGCCAGCGAATCC 58 10363254 10363274 TTGTCAAGGTTACCAAGAGGT 59 NA Drosophila melanogaster 61 CG5367 FBgn0032228 FBtr0080055 3 1 1 81 2L 10355000 10355080 ATTTCAACTGTACAGTGACGG 58 10354939 10354957 ACCAATTACCACCATGGCA 59 NA Drosophila melanogaster 61 CG31875 FBgn0051875 FBtr0079973 3 1 1 60 2L 9996143 9996163 ATCTCATCCGTCTTACCAAGG 59 9996103 9996122 TTTCGTACCTTTGCGAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dref FBgn0015664 FBtr0079889 1 1 1 80 2L 9965305 9965383 CTCTGGTGATTGCTTTGGA 57 9965243 9965263 GAATCTTTGAAGTGATTGGCG 58 NA Drosophila melanogaster 61 CG9525 FBgn0032080 FBtr0079786 2 1 1 60 2L 8961802 8961822 TGGCAGAGGATCTACAATCAG 59 8961762 8961781 GGTGCATATGTCTTAGGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 1 3 3 80 2L 8944159 8944242 GACGGATGAGGGACTTGAC 59 8944097 8944118 TCCAGCACATACATTTGATTGG 59 NA Drosophila melanogaster 61 CG13386 FBgn0032040 FBtr0079661 1 1 1 83 2L 8399299 8399319 GGCGAAAGTCTAAGTGATACC 58 8399364 8399456 TCCATAAGGACCCACACTG 58 NA Drosophila melanogaster 61 CG8353 FBgn0032002 FBtr0079593 1 1 1 60 2L 8214453 8214473 AAAGAATGAGGAGGTTGTGAC 58 8214677 8214697 TGTCAGAAGTTCTTGAACCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301128 1 1 2 81 2L 8028172 8028657 TTAGTTGTTGGATGGTTGGC 58 8028110 8028128 TTGGGCATGTAGATCCAGG 59 NA Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079482 1 1 2 268 2L 7763381 7763401 CAACGATCCCATATTCATGGT 58 7763692 7764554 CTTCGTTATCGATGCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 chm FBgn0028387 FBtr0079443 3 1 1 81 2L 7414000 7414084 ACTCGAAGGTAAAGCTGGA 58 7414128 7414147 AAATCATAGTCAGGCACCAG 57 NA Drosophila melanogaster 61 CG11289 FBgn0031887 FBtr0289952 3 1 1 80 2L 7068627 7068696 AAGGATCTACCGTTTGCAC 58 7068740 7068758 CTTAAAGCCAGAACCACCG 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 3 3 3 102 2L 6721258 6721279 GGACAGAACAACTACAGAAGGA 59 6721121 6721195 AACTTTGCAAGCGTTTGGT 59 NA Drosophila melanogaster 61 CG34380 FBgn0085409 FBtr0112617 1 1 1 80 2L 6203307 6203420 AAGGATGTTCAGGTATTTGTGC 59 6203461 6203479 AAATTGCACAGGTTCACCC 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079196,FBtr0079197 1 3 3 98 2L 6121936 6122016 GTCGCATTTCTCTAGAAGCC 58 6122075 6122095 ACTCATTGGTGATCTCATCCT 58 NA Drosophila melanogaster 61 CG6907 FBgn0031711 FBtr0079096 2 1 1 60 2L 5524829 5524850 AATCGGACACCATTTCAATCTG 59 5524867 5524889 CTTGACATTGTAGAGCATCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4ac3 FBgn0031695 FBtr0079068 2 1 1 127 2L 5268887 5268906 ATATTGTTCGTGCCGAAGAC 58 5268991 5269064 CCATTTCTGGTCTATGCTTATCAG 59 NA Drosophila melanogaster 61 CG15436 FBgn0031610 FBtr0077442 1 1 1 92 2L 4463779 4463852 TACATCAGGGATAATGGCGG 59 4463907 4463925 ACTCTGGTTCTTCGTCTGG 59 NA InUTR Drosophila melanogaster 61 Elp3 FBgn0031604 FBtr0077439 2 1 1 121 2L 4446044 4446115 CATGCCGCTTGTTAGTTCC 60 4446199 4446218 TTTCCTGAATGCCAACTTCG 59 NA Drosophila melanogaster 61 lectin-24Db FBgn0040102 FBtr0077469 1 1 1 60 2L 4188961 4188980 GCCATCAAGGATCAAGAGGA 59 4189003 4189021 AGTAGCTCTTGTCGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or24a FBgn0026394 FBtr0289965 2 1 1 85 2L 4165064 4165082 ATGTGGTCTACACTTGTGC 57 4164942 4165015 TAGATTGGAACACGCTTCC 57 NA Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 3 1 1 177 2L 3670376 3670461 CCAATGTGCAGGAATAAACCT 59 3670219 3670237 CTTGATATTCGTCCCAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 3 1 1 75 2L 3509847 3509865 ACTTCGTCCCATATTTGCG 58 3509723 3509808 TACCATATGTGCAATGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34406 FBgn0085435 FBtr0112671 2 1 1 113 2L 3171996 3172066 CTTTGGACGGCATAAGTCC 58 3171901 3171919 TTCAGTCGGAAGGTCATCG 59 NA Drosophila melanogaster 61 CG15395 FBgn0031440 FBtr0114513 3 1 1 197 2L 2610235 2610255 CGCAATAAGTGAGGAGTTTCC 59 2610414 2610488 AAGCGATAGGCCTTTGGAG 59 NA Drosophila melanogaster 61 CG34447 FBgn0085476 FBtr0112751 3 1 1 104 2L 2419490 2419560 TGTACTCGAATTCCACCCG 59 2419404 2419426 AGCCATGGATGAGTATCTTTAGG 59 NA Drosophila melanogaster 61 Obp22a FBgn0043539 FBtr0100503,FBtr0077866 1 2 2 97 2L 1992112 1992130 TACTTCTGCTTGGCCTCTC 59 1991980 1992004 CTTCTTCCTATGAACATTGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Npc2a FBgn0031381 FBtr0077816 2 1 1 154 2L 1988527 1988545 ATCCTCAAGAGGAACACCA 57 1988663 1988681 TTCAGACCACTGTCCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10908 FBgn0031376 FBtr0077813 2 1 1 80 2L 1974465 1974567 TCATCGTTCAGTACAGCTCC 59 1974609 1974628 ACACGATCAACAGGTACAGG 59 NA Drosophila melanogaster 61 CG17660 FBgn0031356 FBtr0077912 2 1 1 84 2L 1708394 1708472 CGACTGAGGAGGAATATGGT 58 1708329 1708349 ATATGACGGAAGCGATAACAG 58 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010 2 1 2 156 2L 1586779 1586860 GCAGTTTACTGACCTTGGG 58 1585159 1585177 TAGTATCCCATGATGCCCG 58 NA Drosophila melanogaster 61 CG31926 FBgn0051926 FBtr0077931 3 1 1 60 2L 1495851 1495869 GCACAAGAATCCTGAACCA 58 1495890 1495911 AATGGAAAGGGTCTTCAATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5011 FBgn0040723 FBtr0077973 1 1 1 60 2L 1201043 1201062 GGTCCGTATCCATATGGTCC 59 1201085 1201103 CTTATCGCGGATGCATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42201 FBgn0085831 FBtr0114289 3 1 1 65 YHet 307219 307237 ACCGTCATCTATGGAAGCC 59 307172 307190 AATTCCTGCACCGAATACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 1 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074720 3 1 8 156 X 19400257 19400521 ATTGTAGCTACCTCCAGCAG 59 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA InUTR Drosophila melanogaster 61 CG1635 FBgn0039854 FBtr0085796 3 1 1 81 3R 27414944 27414963 ATATGTGACCTATCTGGGCA 58 27415006 27415084 TTTATGACAGCACCAAGCAG 58 NA Drosophila melanogaster 61 CG15554 FBgn0039820 FBtr0085736 1 1 1 135 3R 26951972 26952376 TTGTTTGGCTGTTAACCCT 57 26952475 26952493 ATTATCCGTCGCAACTGAG 57 NA Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 1 2 2 88 3R 25065691 25065951 CACAAAGACATTGAACCCAG 57 25065622 25065640 TTGTAGGTCGAATTGGGTG 57 NA InUTR Drosophila melanogaster 61 Ssl2 FBgn0041780 FBtr0085343 1 1 1 60 3R 24857549 24857569 CAGAGGACTTTGTCTTTGCTG 59 24857442 24857527 TTCTTTACGCGATCGTACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 1 2 2 80 3R 8812087 8812107 ATTCACAAGAACACATGGCTC 59 8812148 8812225 GGAGCACTCAGATTTCTTGG 58 NA Drosophila melanogaster 61 CG3809 FBgn0037995 FBtr0082545 3 1 1 60 3R 8024272 8024292 CCTGCTAACACTTTATCAGCT 58 8024419 8024438 GATGATCACAGCACAAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 kto FBgn0001324 FBtr0074884 2 1 1 80 3L 19836590 19836672 GAACATGCAGTCAAATCGC 58 19836716 19836734 CGTTGTCGTAGCATCTGTG 59 NA Drosophila melanogaster 61 mRpL21 FBgn0036853 FBtr0075022 2 1 1 84 3L 19248042 19248061 ACTATGCGTCAAATGCTACG 58 19247901 19247919 TTACCGGCGATATGCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CkIIalpha-i1 FBgn0015025 FBtr0075504 3 1 1 166 3L 15810266 15810344 AAATTGATGCTGCTATCCTGG 58 15810469 15810490 CTCCAACTTGATCTGAAATGCA 59 NA Drosophila melanogaster 61 Cep135 FBgn0036480 FBtr0075638 2 1 1 88 3L 15119850 15119869 GTACCACTGTCTAACCCAGG 59 15119920 15120127 AGATCTGTCGCCTGAACTC 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267,FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 3 6 6 112 3L 4126918 4126997 CTCTCGAGGAGATTAACAAACTC 58 4126828 4126847 GGTGGACATAAGGTTTGCAG 59 NA Drosophila melanogaster 61 mei-W68 FBgn0002716 FBtr0086461 1 1 1 62 2R 15345881 15345899 CTAAGCTTGGGCATACTGG 58 15345983 15346001 CATCAGCAGCCTTAAGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8386 FBgn0034061 FBtr0087264 1 1 1 80 2R 11894886 11894968 GTACCAGGCACTAATTAAGTATGTG 59 11894830 11894848 CCCTCCTTGTTGGATTCCA 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089618,FBtr0089615,FBtr0089621 3 7 7 99 2R 10490079 10490098 ATCGCTACGACCGTAATCTC 59 10489938 10490017 GAAGTTCGACGTAGTTGCG 59 NA Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 3 1 1 103 2R 10090723 10090879 CCTCAGCAAGATGTTGGGA 59 10090638 10090656 GCTCCGTCATGTGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34222 FBgn0250822 FBtr0112415 3 1 1 80 2R 6207870 6207963 GATCAATTAAACGGGATGCGT 59 6207810 6207829 TTTCTGTCTAAGTCCTCCGG 58 NA InUTR Drosophila melanogaster 61 CG8080 FBgn0033373 FBtr0088633 2 1 1 91 2R 4977978 4978055 TGAACGAGGTATTTATTGGCG 58 4977907 4977925 TTTGGTCTTGTTCACCACG 58 NA Drosophila melanogaster 61 CG8272 FBgn0033337 FBtr0088686 3 1 1 61 2R 4777366 4777385 CTCTTTAGAGCACTGCAGTG 58 4777261 4777285 GCTTGGATATGTTTATACCTGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 2 9 9 80 2R 4568218 4568302 TCATGGACTACCGTGATATGAC 59 4568342 4568361 CTTCCCAGTTGACTAGACGG 59 NA Drosophila melanogaster 61 CG11112 FBgn0033164 FBtr0113047 2 1 1 107 2R 3288299 3288382 TTTGTACGATCGCTTTGGTG 59 3288449 3288470 TTATGACCTTATCCTCGAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Spn3 FBgn0028986 FBtr0081450 3 1 1 107 2L 20837900 20837973 TGAAGTATTTGTGCCTGCT 57 20837811 20837831 AGGTAATGAGATTCTTGTCGG 57 NA Drosophila melanogaster 61 Mst35Bb FBgn0013301 FBtr0080681 1 1 1 149 2L 14882384 14882402 AAGCACTGTGACTTGAAGC 58 14882204 14882222 TTACTTGCAAATCCGTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9232 FBgn0031845 FBtr0079322 3 1 1 82 2L 6667005 6667100 CGTTGTTATCGACGAGTGG 58 6666941 6666962 CTCCCTTGTTCTCGAATATCTG 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 3 3 3 81 2L 1180919 1181008 GAAATACGATACTCCCGATGTG 58 1181049 1181068 GTAGAGTCCTGTAACGTGGT 58 NA Drosophila melanogaster 61 CG4726 FBgn0031307 FBtr0077958 1 1 1 87 2L 1146464 1146548 AGGCCAAGGGTAAGATCAC 59 1146599 1146617 AGGACCAGCAGACAAACTC 59 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0078115,FBtr0300568,FBtr0078114 1 3 3 60 2L 133227 133247 AAGGCATGTGACGATTTATGG 59 133269 133287 CATACTCCTCAGCTATGCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079429,FBtr0079430 1 2 2 60 2L 7026741 7026760 TGTGTTAGACAACTGGGAGG 59 7026612 7026633 CTTTGTTTGCAGAGTCATAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31087 FBgn0051087 FBtr0084855 1 1 1 105 3R 21137433 21137453 GGGCCAATAATGTGATGTACC 59 21137278 21137366 TACAGATCATTGGCCGGAC 59 NA Drosophila melanogaster 61 Arp11 FBgn0031050 FBtr0074760 1 1 1 81 X 19539720 19539738 GTCTGTTCGACTACGACAC 58 19539607 19539678 AGTAGATGCTTGAAGAAGATCG 58 NA Drosophila melanogaster 61 CG5948 FBgn0039386 FBtr0084939 1 1 1 80 3R 21722408 21722493 CAGTTTCCCAATAACTTTCTCG 57 21722532 21722552 CAGGTAAATGCTCTGAAAGAC 57 NA Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 3 2 2 82 X 11684958 11684976 CATCCACAGAGGAACTTCC 57 11685019 11685105 GTTCATCGTTATATGCTGATCC 57 NA Drosophila melanogaster 61 nimB2 FBgn0028543 FBtr0080618 1 1 1 91 2L 13966007 13966520 CTACAAGGAAGTTCCAACCG 58 13965935 13965953 CTTGGATGCGACTCATGTC 58 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 3 2 2 80 3R 19557825 19557843 TTCTTGAGTCGCTTAAGGG 57 19557702 19557782 ACTTGTTAATATCGCCCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 1 2 2 81 3L 1435039 1435057 ACTTGAAAGTGGTGTGCCT 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 1 2 2 97 2R 17107085 17107186 CATTGTCAAATTCCTCGTTGAG 58 17107009 17107027 ACAGATTATTGCAGCTGGC 58 NA Drosophila melanogaster 61 Obp19c FBgn0031111 FBtr0077326 3 1 1 215 X 20289403 20289487 GATCAAGTTGATGGACGCC 59 20289206 20289224 ACCAGCTTTACGTTGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8195 FBgn0034032 FBtr0087353 3 1 1 85 2R 11452083 11452102 TCAGCATTTACCTGCTAGTC 57 11451961 11452038 CTCCATCATAGCATAGTTTCCA 57 NA Drosophila melanogaster 61 Pk17E FBgn0004462 FBtr0074634 3 1 1 80 X 18685105 18685191 CTCCATATTCTATCGGAGTACGT 59 18685228 18685249 TAAACGAACCAGATCAATGGAG 58 NA Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 1 2 2 142 X 17314084 17314102 ATGGTGAACTTCCATCACG 57 17313900 17313979 CCATGTAGTTTGAAGAAGCG 57 NA Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299578 1 1 2 152 X 16917167 16917185 TATTGGATGACCTCACCGG 58 16917301 16917654 GGTCGGTTTATTTCGCTCG 59 NA Drosophila melanogaster 61 CG7872 FBgn0030658 FBtr0074046 1 1 1 60 X 15472871 15472890 CGTCATCCAGTACTATTCCG 57 15472912 15472931 CGTGGCAAAGTACTTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12539 FBgn0030586 FBtr0073987 2 1 1 88 X 14738674 14738692 ATGTCAATCGACTGGTGCT 59 14738548 14738623 ATCTCTGGGTACATTCGGTC 59 NA Drosophila melanogaster 61 CG1461 FBgn0030558 FBtr0073908 2 1 1 107 X 14155868 14155887 CCAAGCTATCCCTTAACACG 58 14155957 14157491 TGGGATCACCAATGGACAG 59 NA Drosophila melanogaster 61 CG12480 FBgn0030537 FBtr0073868 2 1 1 60 X 14064275 14064297 ATACACTCCAGCTCATCTTAAGG 59 14064317 14064335 GGCATAGGTATCAGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748,FBtr0073747 2 2 3 107 X 12979781 12979872 TTTCGTCATCAAGTGCCTC 58 12979692 12979710 GGCACATCTACTTTGGCTG 58 NA Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 2 2 2 80 X 12706248 12706268 GTCTACAAGCACTACAACGAG 58 12701247 12706209 CGTTATGGCATACATCATCTGG 59 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 1 3 3 80 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148064 9148155 GTGAGCAGATCAGAGTCCA 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 1 5 5 80 X 8409417 8409506 CTTCAAAGGAGTTCCCTATGC 58 8409545 8409566 GCAAAGATGAACAGAACATTGC 59 NA Drosophila melanogaster 61 CG14439 FBgn0029898 FBtr0302357,FBtr0302356,FBtr0070960 2 3 3 119 X 6649036 6649054 GTGATGAACAACATTGGCG 58 6649136 6649215 GAGAATAGAACTGATGCCGT 57 NA Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 3 2 2 117 X 6215017 6215856 AATGTATTCGAGCAGGTCG 57 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0070823 2 1 4 137 X 5796021 5796042 TCGGTTTATTCCAGTCATTCCT 59 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Prosbeta2R1 FBgn0029812 FBtr0070816 2 1 1 113 X 5703261 5703279 TACAAGGACGGCGTTATCC 59 5703353 5703445 GCCACAACAGTATATGTGATCC 59 NA Drosophila melanogaster 61 Cpr5C FBgn0029811 FBtr0070815 1 1 1 83 X 5698768 5698849 CATTCAAGTTTGTGGCCCT 58 5698896 5698914 GAGCAGCATGGTACAACTG 58 NA Nonspecific Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 2 3 3 91 X 5654841 5655209 ACGATCAGATGCAAATCAAGG 59 5654770 5654792 CATGTATAACTCCATCTCCTCGA 59 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070793 2 1 2 193 X 5389801 5389886 GACTTGCTGGATAATGAAAGAG 57 5389629 5389648 AGTACTTGAAGACGAAAGGC 58 NA Drosophila melanogaster 61 CG12680 FBgn0029740 FBtr0300018 1 1 1 60 X 4892091 4892112 CACTATACCTTTGGCTCTAGTC 57 4892131 4892151 GATTCGGCAACAAATATCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706,FBtr0070707,FBtr0070704 1 3 4 294 X 4582705 4585687 GTTACCAAGGAGAACCGCT 59 4592397 4592415 TACGATCCAAAGTTGCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12692 FBgn0029703 FBtr0070658 3 1 1 80 X 4195724 4195844 ACATTTGTCCGGTGAATTGC 59 4195663 4195682 GTCTCATCCAAGTGTAGGCA 59 NA Drosophila melanogaster 61 Sgs4 FBgn0003374 FBtr0070524 1 1 1 61 X 3144805 3144823 TGAAGGACCTGCTAACACC 59 3144848 3144866 CTTGCACGAAGCTTGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4061 FBgn0025630 FBtr0070330 3 1 1 113 X 1966664 1966682 GAACACGAAATACCAGCGT 58 1967167 1967185 CGTGTCCAAAGTAGGAGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 usp FBgn0003964 FBtr0070346 3 1 1 60 X 1934254 1934274 GGTTCTGATGACTTCATGACC 58 1934214 1934232 CTATGATGCGCTCGATCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 3 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 Su(Ste):CR42438 FBgn0259869 FBtr0300166 3 1 1 181 U 9441244 9441262 GAGTGAACGGCAACATGTC 59 9441406 9441425 CGTGTCCTGAAAGTAGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 1 7 7 85 4 470935 471007 ATGGAGTTGGTTACTGGTG 57 471053 471074 CTTATAAGATGAGAAGCGTCCT 57 NA Drosophila melanogaster 61 CG1792 FBgn0039860 FBtr0085819 1 1 1 74 3R 27442218 27442237 AGATCGAGGTTCTTACTGGT 57 27442327 27442345 AGGGTGAGCAAATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 2 2 2 80 3R 27386445 27386465 GGTTTACCAGGACATCAACAC 59 27386505 27386591 TAGTCGTAAGAGTGGCATCTG 59 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684,FBtr0110860 1 2 2 83 3R 26339276 26339296 CAGAGATGATCTTACTGAGGG 57 26339154 26339233 CTTCATTTCTCCTTTCGAACC 57 NA Drosophila melanogaster 61 CG42592 FBgn0260969 FBtr0301747 3 1 1 69 3R 25661710 25661728 CATCGAGTTCTCCACATCC 57 25661659 25661677 TAGCAACCTAGTCAGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6420 FBgn0039451 FBtr0085046 3 1 1 90 3R 22548703 22548722 TTCACCACAGGTCAAATCCA 59 22548560 22548650 TCTTGTCGATCAGTCGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6420 FBgn0039451 FBtr0085046 2 1 1 89 3R 22548703 22548721 TCACCACAGGTCAAATCCA 58 22548560 22548650 TCTTGTCGATCAGTCGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085055,FBtr0085056 3 2 2 98 3R 22450526 22450544 ATTGGGAGGATCCTCTCAG 57 22450446 22450465 TCAGGGATCTGAGCATTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmbeta FBgn0002733 FBtr0084982 3 1 1 61 3R 21831191 21831209 TCAACTACCTGCAAGTGGT 58 21831148 21831166 TACTGGAGCTTGAAGAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084885 3 1 2 95 3R 21445618 21445636 CGATTCTCGTCAACTCGGT 59 21445694 21445777 AGTTCTCCTGCGATGAACTC 59 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084539,FBtr0084540 2 2 2 60 3R 19880339 19880357 AATCGTGGACTACGACGTG 59 19880380 19880399 ATCGATGAGCAGTTTCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18596 FBgn0038953 FBtr0084216 3 1 1 81 3R 18202914 18202988 TTTCTCCTTAAGTGCGACG 57 18203030 18203051 GTCGATGGTATTGTACAAAGAC 57 NA Drosophila melanogaster 61 CG18596 FBgn0038953 FBtr0084216 2 1 1 81 3R 18202914 18202989 TTTCTCCTTAAGTGCGACGA 59 18203028 18203051 GTCGATGGTATTGTACAAAGACTC 59 NA Drosophila melanogaster 61 CG5697 FBgn0038846 FBtr0084001 1 1 1 159 3R 16842142 16842234 ACTGCTGACTATTCCTACGG 59 16842356 16842374 AGACACTGTCGGAATAGGC 59 NA Drosophila melanogaster 61 CG31206 FBgn0051206 FBtr0083875 3 1 1 80 3R 15933212 15933304 GATATGCTCATAATGTGCAGG 57 15933152 15933172 GTGGTAGATTTCCATGAAACC 57 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100378 1 1 7 87 3R 13793474 13793492 AGAATCAGATGGCTCTGGC 59 13793543 13793561 CTGTCACTCACCTCTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31292 FBgn0051292 FBtr0083199 2 1 1 61 3R 11732204 11732222 GTAGGCTTGCTGATCACCA 59 11732247 11732324 TTGCTGTGGAAGTACTCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301723,FBtr0301722 1 3 3 80 3R 7867018 7867036 TCAAGGGAAATTCAGCAGG 57 7867078 7867176 GATATCCATTACATCCACCCG 58 NA Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082393 1 1 2 150 3R 7289474 7289760 TTACAAAGGAGGAAGGAGCA 58 7289873 7289891 CCAATGGCTGTAGTAGCTG 58 NA InUTR Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 3 1 1 65 3R 4620575 4620594 AGAATCAAACCTCCCACGAG 59 4620622 4620731 TCGATATGTCGCACTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG1142 FBgn0037504 FBtr0081559 3 1 1 85 3R 3299033 3299053 TGAATCCAGGACTAGAACAGG 59 3298555 3298986 CTTTGAGCGTTCAGCTCTG 59 NA Drosophila melanogaster 61 CG1315 FBgn0026565 FBtr0081699 1 1 1 80 3R 2468967 2469596 CGGATCTGAAGATCATCGC 58 2468905 2468923 CATAGGCAATGAGGTCCTG 57 NA Drosophila melanogaster 61 CG31482 FBgn0051482 FBtr0081679 3 1 1 99 3R 2427173 2427191 TGAACACAATCGGTTGAGG 58 2427254 2427329 ATTGGCTAGCACTTTAGCA 57 NA Drosophila melanogaster 61 CG34287 FBgn0085316 FBtr0112483 1 1 1 60 3R 1679430 1679450 CCTGTGGATTTCCGAATTCTG 59 1679471 1679490 TCATGTACACCGATCTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14669 FBgn0037326 FBtr0078679 1 1 1 111 3R 1280610 1280628 TTGACAATGTGACTGAGGC 58 1281082 1281181 TAGTTATATTGCGCCGAGC 57 NA Drosophila melanogaster 61 CG2016 FBgn0250839 FBtr0078847 1 1 1 90 3R 782935 783019 AGTGATACAGGCTGCTCTC 58 782863 782881 AGTGAGTTTGGTCCTGAGC 59 NA Drosophila melanogaster 61 CG9804 FBgn0037251 FBtr0078943 1 1 1 60 3R 262761 262781 AGCTATTCAGCAGGATTACAG 57 262721 262740 GATTCAGGATCTGGTTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0100617,FBtr0078906,FBtr0078905 3 4 4 81 3R 150465 150485 GTTGAAGAACGTCAGTGTTCC 59 150524 150607 GCATTACTTGGGTCTTTAGATCG 59 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 3 5 5 132 3R 66124 66142 TACGAGCAAGAGGACTTGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 3 4 4 116 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561733 23561751 GAACAGAGTCAATGGGAGG 57 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 2 4 4 116 3L 23560302 23561655 TACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 3 1 1 144 3L 22463769 22463790 CAATTAGATTGCCGTTAAGGTG 58 22463894 22464985 TAGACAAGAGCCAGAAACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 msopa FBgn0004414 FBtr0078482 3 1 1 66 3L 22075938 22075956 CTTCATACAGATCGCCGTG 58 22075986 22076004 CGGATCTTCCTGTGGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Clc FBgn0024814 FBtr0300813 1 1 3 134 3L 20234199 20235897 GGGTTAATAGAGCACATAGCC 58 20235993 20236011 AGATCCACCCGTAATCTCC 58 NA InUTR Drosophila melanogaster 61 CG7017 FBgn0036951 FBtr0074856 2 1 1 82 3L 20204842 20205132 TGAATAGAGCTAGCGGTGTC 59 20204779 20204800 CGATAGGTATTCAAAGTCCTCG 58 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 2 2 3 110 3L 19881568 19881648 TGAAGCCGAATAACGACGA 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 3 2 2 80 3L 19604669 19604852 ATAGTGGAGGTATCCAATCCC 58 19604609 19604627 GAAGACGCCTACGTAAGGT 59 NA Drosophila melanogaster 61 CG14100 FBgn0036889 FBtr0074971 2 1 1 80 3L 19582547 19582565 TGGAGCCCATAACTTGCTC 59 19582425 19582506 CCAACCAAGTTTAAGAAACGGT 59 NA Drosophila melanogaster 61 CG14096 FBgn0036871 FBtr0074986 2 1 1 94 3L 19460058 19460131 TAATGTTCAAATCCGCCGT 57 19459982 19460000 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34252 FBgn0085281 FBtr0112446 1 1 1 107 3L 18064752 18064770 AACGATAGTTGCCAATCGC 59 18064309 18064681 GCACAGCTGATTAACTCCC 58 NA Drosophila melanogaster 61 CG32188 FBgn0052188 FBtr0075164 3 1 1 298 3L 17826674 17826692 GCGCTTTCTACTAGCTCTC 57 17826394 17826412 GAACTCGTACAACAACCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32164 FBgn0042177 FBtr0075313 2 1 1 132 3L 16597698 16597716 CAGGTGCTTACCTTTGTGG 58 16597810 16597889 AATCATCGTCTTCCTTGAGGT 59 NA Drosophila melanogaster 61 CG13047 FBgn0036594 FBtr0289964 1 1 1 96 3L 16278468 16278488 TCAAGTGCTTTAGACAAACCC 58 16278314 16278332 CTACAACTCCTGGTTTGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 3 2 2 81 3L 16087580 16087599 TTATCCGTTCCTAGACAGCA 58 16087643 16087719 AGTTTCATTCCGCTTTGGT 58 NA Drosophila melanogaster 61 Eig71Eh FBgn0014848 FBtr0075583 2 1 1 81 3L 15652218 15652306 CGATAGCTTCTCCGAATCGA 59 15652156 15652174 GGAGGTCTTGGAGTCACTC 59 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075635 1 1 3 91 3L 15101981 15101999 GGAACCGCAATTTCCACTG 59 15102052 15102451 CTTGAGAACGATCTTTGGCAG 59 NA Drosophila melanogaster 61 CG3868 FBgn0036422 FBtr0075729 1 1 1 60 3L 14394054 14394368 GGATAAGGCTGCCAATCAG 58 14394012 14394030 GGGATCAAACTTGGCATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34429 FBgn0085458 FBtr0112730 2 1 1 101 3L 13056704 13056722 AGTCTGTGTCCTGAAGAGC 59 13056787 13056857 CTAGATGGTGTGAGCAGGA 58 NA Drosophila melanogaster 61 CG11279 FBgn0036342 FBtr0075887 3 1 1 82 3L 13040199 13040217 AAGAAGGCCAAGCTACCAG 59 13040263 13040344 ATTGGCGCATTTGATCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 2 1 1 61 3L 13003069 13003087 TTACGGAGCAGGAATTGGT 59 13002954 13003044 TAATGCCTCTTGGAGGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 3 3 3 80 3L 12737070 12737148 TTACAACTGGTGTCATGAGC 58 12737190 12737209 GTTCTCTGTACTGTCCATCC 57 NA Drosophila melanogaster 61 CG6910 FBgn0036262 FBtr0290130 1 1 1 92 3L 12180198 12180277 GTGCTGATCTTCAATCGCT 58 12180328 12180351 GTCGATTAAGGTCTGGTAATATGG 59 NA Drosophila melanogaster 61 Tim13 FBgn0036204 FBtr0076089 1 1 1 60 3L 11767282 11767300 CACCTATGGCAATCGTCTG 58 11767240 11767258 GGTCATCTCCAACGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 2 2 2 80 3L 11714552 11715111 CCCTCTATTCCGGTATTTGG 57 11715154 11715172 TCAGGGTGTAGTAGGTTCC 57 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 1 5 5 115 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG6175 FBgn0036152 FBtr0076183 3 1 1 94 3L 11286950 11286968 GATATGGATACCACTCGCG 57 11284196 11286892 GAAGAGGAACGTGTCACAG 58 NA Drosophila melanogaster 61 CG12523 FBgn0036102 FBtr0076266 1 1 1 71 3L 10794671 10794689 CAAGATCATCTCGCAGCAG 58 10794724 10794742 TATCCTCCAGACGAACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 1 2 2 60 3L 10626379 10626397 ACGTATCCAGATCCTCCAG 58 10626418 10626496 GGACACGAAGATTGTATTAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG6628 FBgn0036072 FBtr0076311 2 1 1 81 3L 10159545 10159569 GGTGGAATCAGAGTATCAATATCAC 59 10159430 10159508 AAATTGCGAATGGAATCTCCC 59 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 3 2 3 143 3L 9360647 9360665 CCTGCTCCAAGTGTTTCTC 58 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA InUTR Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 1 3 3 80 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114547 2 1 9 112 3L 8354557 8354581 GAGATGGGTAACTATTTATCTAGGG 58 8350990 8351118 TGATCTTCTGGGCCATCTC 58 NA DesignRelaxed Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 2 2 2 150 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328865 7328883 CTAGCGATCTCTTGACCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG32407 FBgn0052407 FBtr0077032 3 1 1 91 3L 5915755 5915773 GATCAGGATCCGACTCCAG 59 5915828 5915919 GGATGGAATGGTTCTGCTG 58 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 2 2 2 80 3L 5430814 5430833 AATACCTTTGCCATCCACAC 58 5430871 5432308 GATGAGGGTATGATATTGTTCTCC 58 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 1 2 2 172 3L 3908525 3909015 AACTACGATGATGAGCCCG 59 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 CG9965 FBgn0035381 FBtr0072976 3 1 1 131 3L 2955728 2955746 ATTAAGCGGTCAAGGACCC 59 2955841 2955924 CTCTCGAACTTGGCTTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 3 2 2 85 3L 2659737 2659815 TCTTAACCATAGGTTATGGGC 57 2659862 2659880 CATGGACTCAGTTACGGAG 57 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 2 2 2 85 3L 2659738 2659816 CTTAACCATAGGTTATGGGCT 57 2659863 2659881 TCATGGACTCAGTTACGGA 57 NA Drosophila melanogaster 61 CG14950 FBgn0035364 FBtr0273408 1 1 1 80 3L 2658367 2658487 TAGAGGTGGAGCTAATCTGC 58 2658306 2658324 TGTAGCACTTCACGTACGT 59 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 2 5 5 126 3L 2629234 2629252 GAGTGCAGTCCGTCTACTG 59 2611989 2629145 TTGAAACGCAAATCTAGCGT 58 NA Drosophila melanogaster 61 ACXD FBgn0040507 FBtr0072874 3 1 1 81 3L 2242202 2242221 GATGATCATAACGTTCGGCA 58 2242264 2242344 CCGTTTCCAGTTGTAATCCA 58 NA Drosophila melanogaster 61 CG13931 FBgn0035258 FBtr0072802 1 1 1 166 3L 1701893 1702301 TGTCCAAACTGTCATCTGGT 59 1701746 1701764 CTTGTACACGGTGTGAGTG 58 NA Drosophila melanogaster 61 CG13917 FBgn0035237 FBtr0072747 1 1 1 132 3L 1597422 1597440 TCTGTACAGGAAGTGCCTG 59 1597535 1597626 ATCCGATGTCATGTAAGCGA 59 NA Drosophila melanogaster 61 CG13907 FBgn0035173 FBtr0072593 2 1 1 60 3L 879207 879225 CCATGTTGGATGTTAGCCT 57 879165 879186 ATATTCGAGACTCCGATAAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 1 2 2 63 3L 258743 258763 GGACGTAGTTATGTTGGAGAG 58 258847 258865 GACGATATCCGGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33398 FBgn0053398 FBtr0086390 1 1 1 60 2R 15637111 15637129 ATACATCGGTTCTCGTCCG 59 15637069 15637087 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33408 FBgn0053408 FBtr0086400 1 1 1 60 2R 15633427 15633445 ATACATCGGTTCTCGTCCG 59 15633385 15633403 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2736 FBgn0035090 FBtr0072403 2 1 1 97 2R 20862237 20862255 ACTTCCTGTGGGAGTTCAC 59 20862096 20862178 CTCTTTGAGAGCGTTGTAGAG 58 NA Drosophila melanogaster 61 CG15800 FBgn0034904 FBtr0072245 2 1 1 60 2R 19678330 19678348 AACTCGTCTTCCTCAGCAG 59 19678288 19678306 ATCTTCTCCACGTAACCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11269 FBgn0034700 FBtr0071765 2 1 1 87 2R 18026473 18026491 GTTCTGCCTGTTCATGAGC 59 18026542 18026560 CTCCAGGAGCATCAGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928,FBtr0300929 3 2 2 192 2R 18001168 18001252 GAGACGCTGAATTTGTTTGG 58 18001458 18001476 CTGGAACTTTCAGGGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 2 3 3 80 2R 17059014 17059035 GGTAAATGTTACGGACTCACTG 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 CG15227 FBgn0034554 FBtr0071514 2 1 1 60 2R 16754112 16754133 TAACAACTTCGAATACCTCACC 58 16754154 16754172 CTCGTTCTTGACGTGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0300422 3 1 2 88 2R 15834740 15834836 TATCAAACTCCGGAAGCAGG 59 15834884 15834905 TTACGTAAGTCGCTACTAGTGG 59 NA InUTR Drosophila melanogaster 61 Toll-7 FBgn0034476 FBtr0086336 1 1 1 60 2R 15715305 15715328 GGATAGTCAACCTGAGTAATAACC 58 15715345 15715365 GAACCAGCAAATAGTCCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 3 2 2 80 2R 15332881 15333448 ATTTCCGGGAGATACCATCC 59 15332820 15332839 TAGAACTGTTGGTGTAACGC 58 NA Drosophila melanogaster 61 CG15099 FBgn0034400 FBtr0086628 1 1 1 80 2R 14731161 14731241 GGATAAAGATATCAGTGCCTCAG 58 14731103 14731121 TTGAGCTTCTTGATGCTCC 57 NA Drosophila melanogaster 61 CG5335 FBgn0034365 FBtr0086708 1 1 1 84 2R 14509317 14509335 CAATCTATCGCATCCGCTG 59 14509382 14509518 GTTAATGTGGAACCTGGCTG 59 NA Drosophila melanogaster 61 CG5189 FBgn0034350 FBtr0299805,FBtr0086694 3 2 2 79 2R 14334159 14334177 CTTTGACGCAGGTTCTCAG 58 14334278 14334296 CAATAGAGCTCCCTCCTGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ote FBgn0003022 FBtr0086768 1 1 1 60 2R 14163628 14163646 GCGTACCTATGCTAACGAG 57 14163586 14163605 GCTTTCGTACTGGTCTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 elk FBgn0011589 FBtr0086802 1 1 1 80 2R 13809518 13811134 GCGATATTAAGGCGCTAACC 59 13811174 13811195 CCGGATATAAGCGTAGTACCTC 59 NA Drosophila melanogaster 61 CG5036 FBgn0028743 FBtr0301142 3 1 1 89 2R 13685112 13685203 CATATCCGAGATTCCTAAACTCTC 58 13685251 13685269 TTGGACTATCCGCTTTGGA 58 NA Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 3 2 2 80 2R 12945342 12945424 GCATCTCTTATATGTCACCCA 57 12945462 12945484 GATCCTCAGGATACATTGTAGTG 58 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 3 2 3 169 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752378 12752397 TACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087024 1 1 2 235 2R 12669536 12669682 GAAGGAAGCAAATTGTGGAG 57 12669879 12669898 GGAATATCCACTAGGTCCCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG30095 FBgn0050095 FBtr0087224 3 1 1 80 2R 12011135 12011155 CAGCGGTATTCATCTCATCTC 58 12011196 12011602 AAGCATATGATGTAGGGCAC 57 NA Drosophila melanogaster 61 CG8401 FBgn0034069 FBtr0301196 1 1 1 80 2R 11916445 11916463 ACAGGATGGAACACATCAG 57 11916507 11916580 AGGCAATGCTGAGAATCTC 57 NA Drosophila melanogaster 61 alphaPS4 FBgn0034005 FBtr0087371 3 1 1 80 2R 11148511 11148532 TAAATTTACACCCATAGCCCTG 58 11148572 11148650 CAATCCTCGCAGAAATCTCC 58 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 2 2 2 81 2R 11109920 11110009 ACGCTTTCAAGACATTGCT 58 11110054 11110072 CACTTTCAGCGACTCTACG 58 NA Drosophila melanogaster 61 CG8089 FBgn0033993 FBtr0087418 1 1 1 60 2R 11034364 11034383 CTCAGAACTATGGCTTCTCC 57 11034323 11034343 CTTTCCCGTCTATGCTTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087444 3 1 2 65 2R 10695976 10696082 TCGTCTTTATCCATACCGCT 58 10696110 10696128 GTAATCGCAAACAAAGCGA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13220 FBgn0033608 FBtr0088116 3 1 1 61 2R 7172129 7172148 GCGGTGAATGTTATGAACCC 59 7172172 7172190 TTCGTCAGGTCCTTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34223 FBgn0085252 FBtr0112416 2 1 1 81 2R 7123447 7123526 CACCTCAAAGTTCAGTTCCA 58 7123567 7123588 TGAAGACGACTAAAGACAAGAC 58 NA Drosophila melanogaster 61 CG33474 FBgn0053474 FBtr0088260 1 1 1 60 2R 6309927 6309946 GAACTGCACGACTATGAACC 59 6309969 6309987 CCGTATTTGACATCACCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosalpha7 FBgn0023175 FBtr0089998 3 1 1 150 2R 5735133 5735209 GCACTGGATACGACTTGTC 58 5735001 5735019 GTGATGATCTTCTCCACGG 57 NA Drosophila melanogaster 61 CG33758 FBgn0053758 FBtr0091759 2 1 1 60 2R 5341175 5341193 ATATGCCTACCTAAGGCCA 57 5341082 5341154 TTCAATTACCTTGAAGGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 3 2 2 82 2R 5320556 5320643 TCATCTATCTAAAGGCTCTGTCC 59 5320685 5320703 GGCGCGATAGAACTTTGAG 59 NA Drosophila melanogaster 61 Tsp42Ej FBgn0033132 FBtr0089030 1 1 1 131 2R 2929228 2929306 CCATATACTACCTAATTTGCAGTGG 59 2929395 2929413 TCTTTCGCTCGAAGAGGTC 59 NA Drosophila melanogaster 61 CG30158 FBgn0050158 FBtr0086165 1 1 1 83 2R 2793791 2793809 TACACGGACAAATATCGCG 58 2793854 2797446 GATGTCCACCTTTAGTGTGAC 58 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 3 3 3 87 2R 2752069 2752151 GGTATTTCGAGGTAACGCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 1 2 2 87 2R 2699512 2699530 CATGAGAACTGTGAGCACG 59 2699578 2700296 CTATTATCGTTTGCACATTGGG 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0301421,FBtr0301423 1 5 7 80 2R 2613140 2613227 TACGTAGCGGTGATATTCTATAGC 59 2613083 2613102 TTCGTCGTCTATGTGTTCCA 59 NA Drosophila melanogaster 61 CG17994 FBgn0033072 FBtr0086001 3 1 1 101 2R 2096349 2096368 AAATTCCTCAGGATCGTCGA 59 2095779 2095797 CGACGATGGAAAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 3 3 3 162 2R 1969441 1969459 CTAAGCGTCCAGAATCGGA 59 1968906 1969244 TCCAAAGGCAATTCTCTGC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640e FBgn0083022 FBtr0113550 1 1 1 60 2L 20421153 20421171 GGAGCCAAAGTTTACACGT 58 20421191 20421213 TATATGGAGCCTTGTAGACATGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-640d FBgn0083023 FBtr0113547 3 1 1 78 2L 20419669 20419688 TCTACAATGCTCCAAGAGCA 59 20419727 20419747 CGAATTAAATGCATCCACAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 1 2 2 80 2L 21660050 21660128 GCACCAATTGTACATCTACCT 58 21660168 21660188 AGATTACCGTAGAACGATTCC 57 NA Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 3 2 2 89 2L 21634962 21634980 AGAAACGAGCCTTTCTCGA 59 21635033 21635107 ACAATAGCAGACGCTCCTG 59 NA Drosophila melanogaster 61 His1:CG31617 FBgn0051617 FBtr0085892 1 1 1 60 2L 21422070 21422089 AGTTGAGAAGAAAGTGGTCC 57 21422112 21422130 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 1 2 2 80 2L 21158237 21158317 CTGAATGAGATTAGGGTTCCC 57 21158177 21158197 GGTGGTATTTACGTAACCTGG 58 NA Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081317,FBtr0081316 1 2 2 73 2L 19795573 19795591 CAAAGACGAACTGACCACC 58 19795022 19795040 ATTTACGAGTGGCACAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Top2 FBgn0003732 FBtr0081287 1 1 1 119 2L 19451818 19451838 CTCTGCAACATATTCTCCACC 58 19451662 19451737 GTCCTTGATCTGCACATCG 58 NA Drosophila melanogaster 61 CG15173 FBgn0032744 FBtr0081178 3 1 1 80 2L 19044078 19044167 TTGACAAAGAATTGGTTCGG 57 19044017 19044035 GAAGGCCTCCTTAAAGAGG 57 NA Drosophila melanogaster 61 CG17324 FBgn0027074 FBtr0300818 2 1 1 88 2L 18820943 18821027 CTCTGTACAACATGATTACCCA 58 18821076 18821094 CACGATCTCATTGATGGGC 58 NA Drosophila melanogaster 61 CG13283 FBgn0032613 FBtr0080928 2 1 1 60 2L 16836063 16836083 ATCAACTTCATACCACTCGCT 59 16836023 16836044 CAATCTCTTCTGGACAACTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 1 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 CG15479 FBgn0032493 FBtr0080481 1 1 1 60 2L 13234404 13234422 TGCTGACTTTCCTCCACTG 59 13234362 13234380 GGAAACGCTTGAGGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 3 5 5 80 2L 10992855 10992876 CTTGGTTACATCAGTGAATCCC 59 10992916 10993007 GCGCTGTACTTTACTGAAGC 59 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 3 3 3 81 2L 10848458 10848553 CTCAGTCTGGAAACAAGAACG 59 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 CG34109 FBgn0083945 FBtr0300423 1 1 1 80 2L 10104948 10106167 TTGAATTCCAGTGTCAGTGTG 58 10106208 10106227 GTAGTCATCTCGCATGTTGG 58 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 3 4 4 130 2L 8536951 8536969 TCATTGGACGCATACAACC 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Bace FBgn0032049 FBtr0079701 3 1 1 60 2L 8495414 8495435 TCCCTACAATGCTTACATTACC 58 8495375 8495393 CAGATAGCCATCCTCACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fu2 FBgn0029173 FBtr0079674 1 1 1 111 2L 8464675 8464694 TAATACGGATCCCAACTCGC 59 8464768 8464844 GTTGCGATCGTACTGAACG 59 NA Drosophila melanogaster 61 CG7781 FBgn0032021 FBtr0079609 1 1 1 60 2L 8324984 8325005 CATCTATGTGATTAGTGCGCTG 59 8322934 8324964 CTTGATGGCATATCCTTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 2 3 6 81 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688666 6688684 CGAGGATCTGTCTAGGCAG 59 NA Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079315 2 1 2 112 2L 6686490 6686571 TTATAAAGGCCACGATGGC 58 6686396 6686417 CATTGATTGACATTCTTCGGAG 57 NA InUTR Drosophila melanogaster 61 Spn27A FBgn0028990 FBtr0079321 3 1 1 60 2L 6672186 6672204 GGAGGTGAAAGTGAAGGTG 58 6672144 6672164 CTTAAGGTTCTGCTGGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk14 FBgn0031803 FBtr0079252 1 1 1 138 2L 6355668 6355686 TTGTCTGGCATTCAACGAG 58 6355788 6355904 CACTGTTAGCCAGAAACCC 58 NA Drosophila melanogaster 61 CG15432 FBgn0031603 FBtr0077438 2 1 1 185 2L 4442539 4442560 ACTAAAGAACGATTCGGATCTC 58 4442706 4442724 TCCTGCTGCTTCTTACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 1 1 1 132 2L 1165063 1165139 ACAAGGTCTCACTGAAGGG 59 1165235 1165253 AGTTCGAAGACCGTAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4726 FBgn0031307 FBtr0077958 3 1 1 91 2L 1143401 1145452 ATATTGGGCAAACTCGTGC 58 1145507 1145525 CTGAGATTCACCTTCAGGC 57 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987,FBtr0077988 3 2 2 81 2L 1117493 1117512 ATCAGCAGCCAATATGTCGA 59 1116678 1117449 GAGATTGTGATGCGACAGG 58 NA Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064 1 1 2 80 2L 546435 546578 CACTTGTGGTAATCTTCTACAGC 59 546615 546636 CCAGGTACAGAACTAGAACCTC 59 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0078115,FBtr0300568,FBtr0078114 2 3 3 60 2L 133464 133483 GAAGGCAAAGACAATGAACG 58 133503 133524 ACTTATCGATGCTAGAAGTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 3 3 3 83 2L 74973 74993 GGATAAGTTTCACGGTGACTG 59 75091 75115 CTCGAGAGTCATTGTTATAAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 3 4 4 80 2L 123790 123873 CTATTACGATCCTATCATTCCCG 58 123732 123750 AGGACTTTAGCGAGTACCA 57 NA Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 2 1 1 101 2L 272613 272631 CTGAAGACGACAAGAAGGC 58 272482 272500 TCTGACACTGGAAGGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0301439,FBtr0078001 3 2 3 92 2L 756067 756676 GCTATAGTGGACTGAACAATCAC 59 756728 756746 CATAACCGGAGCCAAATCC 58 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077609 2 1 2 190 2L 3278600 3279265 GAAGGGAAATGACAGCCAC 58 3278428 3278446 AGTGATCACAGGACGTTCG 59 NA Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 2 1 1 67 2L 3529058 3529076 CTCGATGCTGGATTTCTGC 59 3528869 3528887 GGATTCGCATGCTATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 3 1 1 68 2L 3529059 3529077 ACTCGATGCTGGATTTCTG 57 3528869 3528887 GGATTCGCATGCTATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 3 2 2 75 2L 3545742 3545760 GATCACCTATTCGTGCGAG 58 3545799 3546740 CTGACTACATCTGTGCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 3 4 9 80 2L 3887037 3887055 TTTCGTCTCGATTCACAGC 58 3884510 3886995 CTGTGACTCCTGATTCATTGG 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 2 5 6 82 2L 4192684 4192705 GAACCTTAAAGACAACAACCAC 58 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 3 5 6 83 2L 4192685 4192706 GGAACCTTAAAGACAACAACCA 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 2 2 3 195 2L 4372531 4378918 GAACAGATTATCTATCCCGGTC 58 4379074 4379092 GATCGGTCATCATGATGCG 59 NA Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 1 2 2 64 2L 4954370 4954388 GGATTCACCCGTGTTACCA 59 4954324 4954342 TAGTAGTAAGCAACGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079043 2 1 11 168 2L 4994986 4995387 CGAACAGATTGTTGGAATCCC 59 4994838 4994856 TAGATTCTGAAGGCGACGG 59 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 3 3 3 105 2L 5034886 5034904 GAGACATTGGTCCAAGAGG 57 5034972 5035073 CCAATAAGACCTTGACGTCC 58 NA Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 2 3 3 83 2L 5539760 5539780 ACTTAACGAAGTACAGGATCG 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 2 2 4 80 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718593 5718665 AGCATAGTTCTGTATGCGC 58 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 1 4 4 92 2L 5976671 5976690 CATTTACCTTTCCGGCACAG 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410 1 1 2 83 2L 6635398 6635662 AGCTCACAGAACGCTACAG 59 6635333 6635351 CGCAACCGAAAGAATTGGA 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 1 3 6 120 2L 6691067 6691085 CACGATACCGTGAATGGAG 58 6690128 6690983 CTAGAATGTTGCCTGAGGG 57 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386,FBtr0290295 2 2 3 87 2L 6768559 6768577 AGTGTTTATGACCCAGCGT 59 6768432 6768508 CATTCCCATGACACCTGGA 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0290119 3 2 3 88 2L 6975792 6975810 GGTACGCAGAACAATCGTG 59 6975124 6975740 ACGGGATCATTGACCACTG 59 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 2 2 2 135 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018953 7018973 GACCGTATTTCAGATCTCCCA 59 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 2 2 2 80 2L 7380575 7380593 CTACTCTCGATTGGTGGAC 57 7380637 7380723 TTTGTGTCTCCGAACACAG 58 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469,FBtr0114587 1 2 2 80 2L 7386640 7387986 GACAGATTGGTGGAAACTTGG 59 7386580 7386600 CGTGGGCGTAAATAGATACTG 58 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 2 4 4 80 2L 7404149 7404233 GAAGATGCCATGAGAGTGC 58 7404274 7404295 ATCCGCATAAGTTTGAATCTGG 59 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 3 4 4 80 2L 7403302 7403320 TGAGAAACAAGTGGCACCT 59 7403358 7403562 GGACTTTCAGAAATTAGATACCCAG 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 1 4 4 80 2L 7444382 7444469 CATTATCGATATGGAAGGGCTG 58 7444509 7444528 ATGTAATCCAGCAACATGGC 59 NA Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079578,FBtr0079577 3 2 2 60 2L 8148005 8148024 CAACTCTAGTCGGATCACCC 59 8148045 8148065 TGGAAATGGTTTAGAGGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 3 2 4 93 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245140 8245158 CCGTAATCGTATAAGCCGG 58 NA Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 3 1 1 60 2L 8519770 8519788 AGGCACAGGATTTCTAGGA 57 8519888 8519906 CCTTACATCCGTTGAACGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 2 4 4 95 2L 8536986 8537004 AATAATTCGCTGACGGTGC 59 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 1 3 4 83 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519738 AGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 1 2 2 80 2L 10013571 10013643 CGAAGGAAAGATCACATCCA 57 10013510 10013529 CTAATGCATCATCCTTTGCC 57 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 1 2 3 160 2L 10322827 10323683 ATGATAAGGATCCCTACCGGA 59 10323873 10323891 CTTCACGGTATCGAAGGGA 58 NA Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 1 2 2 102 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328646 10328666 GAAATCCATCGATGGTTGGAG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 1 6 6 80 2L 10398149 10398167 AGTGCCCTTTGTGTATGGA 59 10398210 10398288 ATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 1 2 3 80 2L 10581364 10581435 TTCTTTCGCAAGCACACTC 59 10581302 10581320 AACCGTTCCTTGAGTTGTG 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487 3 1 10 151 2L 10826070 10831331 CAGATTCTTTCCTGCTCGA 57 10825825 10825958 GTAGATGATGTACGCTTTATCG 57 NA InUTR Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 2 4 4 75 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965844 10965862 CTAAATCGCTAACGCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115 2 2 4 85 2L 11165642 11165661 AAGACTGTATGGCACAAAGG 58 11163929 11165594 CCATGGAATCTCGAGATGG 57 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 5 6 101 2L 11835159 11835177 CGAATATGTCGTTCACCGC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299656 3 1 8 96 2L 12477159 12482572 CTTTCTGCCAGATGCATCTG 59 12458191 12458209 CACCGCTATCATGAGATGC 58 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642,FBtr0112643 3 2 2 190 2L 12623012 12625465 ATCGAATGCTTCCGATTGC 59 12625619 12625637 ACTGATGGTGGTTCAGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 3 3 3 247 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976948 GAGTACTTGGACAGAGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0289981 3 1 3 80 2L 13170780 13171327 ACTAGCTACATTGCGAACTC 57 13170719 13170737 GTGAGGTTCACTCGAATCG 58 NA Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 2 2 2 80 2L 13829396 13829414 CCGAGACATACACCTTTGG 58 13829265 13829352 ATAAGGCAATCTGGGTTCG 57 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080600 2 1 2 80 2L 14164072 14164094 TACCAGGTTAAGGACTCTTTGTC 59 14163422 14164035 GCTATCGTTCTTAATCTTGCCC 59 NA Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 1 2 2 80 2L 14617628 14618076 GACCAAGAATATAGCGAAACTGG 59 14618115 14618134 GGCTTTATCGACTGCAACTG 59 NA Nonspecific Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 1 4 4 80 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065387 15065405 TCAATAGCCTCCTTGACCG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 1 3 9 174 2L 15261626 15261725 TGGAAATTGAATGCGATACG 57 15261471 15261491 GTCCTAAACGTTGTAGTTGTG 57 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 1 4 5 80 2L 15760339 15760416 CGATCCGGATTACAGAACC 57 15760277 15760295 GGATAGTTGGCTCCATAGC 57 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 2 3 3 91 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451922 16452206 GCATCATAGTACCAGCTGG 57 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 111 2L 16467745 16468061 ACTATTCCGAATCCCTGGC 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0100399 3 1 7 114 2L 16475395 16481532 CCAGAAAGACCGGGTAGAC 59 16475299 16475317 CATAATCGCCGTTGTCCAG 59 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 1 1 4 130 2L 16622737 16622755 AATACTACATCGCACCGCA 59 16652750 16652768 CTGGGAGACCATCTGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080939 3 1 2 89 2L 16728253 16728271 AAAGTTCACATCCACACGG 58 16702878 16728202 CAAGCAAACTCCCATATTCGA 58 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 2 1 1 83 2L 16730163 16730182 TGAAGTCCAAGAATTGGGTC 57 16730281 16730300 GGTACAATCGAGGACTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 3 14 16 83 2L 16774783 16774801 GAGACTCTGGATACCCAGC 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080901 3 1 16 82 2L 16777428 16778011 CTTCAAGATGCGGTACCAG 58 16778057 16778075 CAATCAGAACCTTGGAGGC 58 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 1 4 4 84 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825418 AATTATTTCCATGGCTAGACCC 58 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997 2 1 2 82 2L 17489893 17491810 AAAGAAACGGAGATCCGTC 57 17489829 17489848 GTAATCGCATGTTTAGCCAC 57 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080996 1 1 2 80 2L 17489894 17496744 CATCAAGCAGGAGATCCGT 59 17489832 17489850 ATCGCATGTTTAGCCACCT 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 3 4 12 95 2L 17717904 17717922 CTCCCTTCAATCCCAACGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 2 4 12 87 2L 17715906 17716688 GTTGTTATCCACGTGACCG 59 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081210 2 1 6 80 2L 19410630 19426213 CGATTTGGATGCTCTATTAGCC 59 19410571 19410589 ACAGTTCCATATTGCGGCT 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107,FBtr0299520,FBtr0081281 1 5 6 80 2L 19511728 19511805 ATTTATGATGGAGGCTACCG 57 19511667 19511685 GTTAGTGGAGAGTTCGCAG 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720 2 1 4 154 2L 19902179 19907772 TGTCAGAAGACAAATTGCCC 58 19907889 19908773 CAAGTCCCGGTATTGATGG 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081353,FBtr0081352 1 2 5 157 2L 20334700 20334721 CGATACCAAAGAACTAGAGCAC 59 20336394 20336472 CACCTGCTTCATTGTTCAGG 59 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 3 2 2 272 2L 20349195 20349213 GAATACGCCCAGAAGAACG 58 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 3 2 2 80 2L 21077745 21078099 ATTCTCATATTGGGCCGCA 59 21078143 21078161 AGTGACGAGGAAGACAACC 59 NA Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0081491,FBtr0301928 3 2 2 101 2L 21200215 21200233 AAGTAGTGAAACAGGCGAC 57 21199882 21199900 ATCATACGCTTGGTGATGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 3 2 2 94 2L 21633906 21634429 CCTACGAGAGTGATCAACTG 57 21634486 21634504 CTCAGTGCCGGTTTATCAG 58 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 1 3 3 80 2L 21759352 21760485 GAGCTGGAAGAAACTTCATCC 59 21760525 21760545 CTTCATCGCATCAAATTCGGA 59 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 3 3 4 98 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141760 22141846 ACAGCATCGATATCCTTAATCG 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 3 4 6 105 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737576 22741716 CGAAAGCCAGTTGACTCTC 58 NA Drosophila melanogaster 61 bft FBgn0041606 FBtr0080320 3 1 2 110 2L 11960348 11960409 TGAGTGTGATTACGCCTCC 59 11960256 11960274 TATCTTCGACTTCTGGCCG 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 3 3 5 171 2R 614798 614818 TCACAAATTCTTGACGTCAGC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 2 2 4 91 2R 1328568 1334051 CGATGAAGTTCAACAACCCA 58 1334105 1334123 AAGAATCAGGAGAACGGCC 59 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 1 5 5 70 2R 1491749 1491767 TCAAGTTCGCTCCCTAGAG 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 2 5 5 71 2R 1491749 1491768 ATCAAGTTCGCTCCCTAGAG 59 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 1 3 6 101 2R 2039490 2039581 CTTGATGTTACCGAGGACTG 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 2 3 6 103 2R 2039492 2039583 GACTTGATGTTACCGAGGAC 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 3 4 4 79 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515389 2515407 GGTACCAGACTTAGCAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 3 2 2 161 2R 3012688 3012927 TGCGATGAGATCATCTTCTC 57 3013051 3013069 GAACATTGTGTCGAAGCAG 57 NA Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 3 2 2 84 2R 3039480 3039498 TCATTAACGCAGTGGAGCA 59 3039348 3039435 CCTTTAAGCAATCCAGTTTCCA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050 1 1 59 92 2R 3236477 3242607 CGGTACCATCGTTTAGATGG 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111053,FBtr0111056 2 2 59 81 2R 3219877 3228462 TTGATTGTGAATGTACCTCCCA 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111056 1 1 59 80 2R 3226193 3226213 CAAATATAGTTGTCGAGCGAG 57 3219873 3226152 CATCTGGGAGGTACATTCAC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 2 2 59 102 2R 3238797 3249235 TTGGTCATCACAGAGCCTG 59 3238713 3238731 AAGTTAGGGCCAATTCGCT 59 NA Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 2 1 1 96 2R 3379452 3379470 TCAGGATGTGAATTTGCCA 57 3379310 3379328 ATTGGACAGGTTATTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 2 4 4 85 2R 3806270 3806291 GGCTTTAATTCAAAGAACGGTC 58 3806336 3806416 TCGATAAGAACCTCTTCGCA 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 CG8736 FBgn0033308 FBtr0290280 3 1 1 137 2R 4482355 4482373 CCAACATGTTCTGCAAGCT 59 4482029 4482047 GCGCATTATCACAGATGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 1 2 3 90 2R 4607280 4607356 AGCGTTACCAGAACTTCGA 59 4607208 4607226 TTTCCCTTGATGGTTCCGT 59 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385 1 1 2 101 2R 4859004 4859022 ACGAAGAGGACGTTAACCC 59 4858605 4858940 AAGTCGAGTGAATCTTCCGA 58 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088561 2 1 3 136 2R 4967663 4967743 GAACTGGATCATGAGTTGGA 57 4967842 4967860 ATCGAGATCCTCACCAGTC 58 NA Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 2 2 2 129 2R 5010059 5010134 AGGAATTTGTCAAGCTAAACCC 59 5010224 5010242 TAGAGTTGGTCATTCCCGG 58 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 2 3 3 106 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021270 5021359 CGATTATCGGTCGCTTGAC 58 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 2 3 3 87 2R 5076504 5076583 GTACTTCATGTTCTACAACACC 57 5076438 5076456 TGCAAGCATGTTCATTGTG 57 NA InUTR Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611 2 2 3 113 2R 5076715 5078788 ATTCGCAGTTAACGATGGC 59 5076620 5076638 GTGACGCCTTTGTAGAGTC 58 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 2 2 2 116 2R 5095793 5095811 TGTTTGTGACCTTCGAGGA 58 5095963 5095981 CCAGGTACAGATAAGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 2 3 10 81 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 2 2 2 131 2R 5473112 5473130 TGAAGAGAATACGCGACGA 58 5473284 5473302 CAATAACGTCGTAGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 3 3 3 84 2R 5649051 5649131 TGATATACGTTGCGGTTGTG 58 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 2 10 17 82 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182824 6183261 CGATTGTTCTAGATTCCCGT 57 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 2 2 3 126 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322251 6322272 CTCTTCAGTCATTAGGTTCTCC 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 1 12 12 99 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 3 5 5 106 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624496 6624578 CCGATGAAGGTCACCTCTG 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 3 5 5 106 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624496 6624578 CCGATGAAGGTCACCTCTG 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 3 5 5 80 2R 7203663 7203682 GCAGAAGGATGACATTAGCA 58 7203433 7203621 TTGGCTCGTTGATTATCGAG 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 2 4 4 81 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269384 7269466 CACCGTGATCAACCTTATCG 58 NA Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 1 2 2 80 2R 7511521 7511539 ATCGAGGTCTATCTGGGTC 57 7511398 7511477 TGGAGGAACTTTCTCCCTG 58 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 2 2 4 114 2R 7784184 7784205 GGAGTCTGGATAGTTAGCTACC 59 7784028 7784111 TACGACAAATCTCGATTGCAC 59 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 2 2 2 80 2R 7837687 7843103 TATACAAGGAGCACATTCAGGA 59 7843144 7843162 CGAAGACGATCACTTTGGC 59 NA Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 2 1 1 71 2R 8293596 8293616 GGAGTACAATGGCAAATACCA 58 8293707 8293725 AAGACTCCATCCTGAGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 1 2 2 97 2R 8378092 8378110 AACCAAGGAGTCACCAAGG 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944 1 1 2 134 2R 8396491 8397085 TCATCTACAGGTCCGAAGG 58 8396316 8396336 CTTCCTCAGTCCCAAATACAG 58 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942 1 1 2 81 2R 8400758 8400876 TGTCATCTACAGCTGGCAG 59 8400695 8400713 CATGGTTGCTTGAAGCGAG 59 NA Nonspecific Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 3 6 6 155 2R 8548085 8548104 GAGAACAAGACCTACAGCTG 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087879 1 1 8 82 2R 8561421 8562503 TATATCAGCAGTCAGAGACGC 59 8560800 8560818 TCGAATAGCACATCCTCCG 59 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 1 4 4 135 2R 8641313 8641405 TTCATGTTTGGCAAGTGCA 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 1 3 12 104 2R 9310221 9323716 AGTACGAAGATGACGAGGA 57 9310135 9310153 TACCGTACTTAGTGGGCTG 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 2 5 12 80 2R 9310225 9326126 GTCTCCTGAATACCTATGACG 57 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 1 4 4 110 2R 9717362 9718065 GCATACAAGTGACCACTGC 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 2 1 1 76 2R 9731306 9731324 CATGAAGACCGCCATTTGG 59 9731186 9731204 AACGCTTGTAAGCCATCAG 58 NA DesignNoJunction Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 1 3 8 81 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 3 2 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179875 10181607 TCTGCAGAATATAGACCTCCTC 58 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087501 3 1 2 165 2R 10499416 10499439 GAAACTGATGTAACAGATGACGAG 59 10499185 10499292 GTTTGGCAGCTTCATCTGG 59 NA Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087446 3 1 2 235 2R 10720760 10720778 CATAGCCAACCAAACGCAG 59 10720977 10721051 CTGCTTGAGTTTCACTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302294 2 2 4 80 2R 10752555 10752687 GGGAAAGTCTGACAAATCCA 57 10752494 10752514 GAATCGTCGTTGACTTTAAGC 58 NA Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404 1 1 2 123 2R 11088420 11088501 TGTCGCAGATGATATTCTTCG 58 11088317 11088338 GTTATGGATAAGGCAAATGTGG 57 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 3 4 6 81 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152253 11152333 ATACACCAATCTCGAATCCC 57 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 3 5 5 81 2R 11211644 11211716 TGCCTGATGCAATGAAACC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 1 4 7 92 2R 11660745 11661328 CCAACAAGGTCGTAATGTAAGG 59 11660674 11660695 GGGTAAGAGTTCCTATACTGCT 58 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 2 3 5 136 2R 11773780 11773799 GACCGTGATATACGAGACGG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 3 3 5 137 2R 11773781 11773800 TGACCGTGATATACGAGACG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258 3 1 3 173 2R 11973119 11974447 GAATCGCCAAAGGAAGGAG 58 11972890 11972908 TTCCATGTAGTCGGTGGAG 58 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154 3 1 5 83 2R 12248358 12248376 GCATCAAGAGTCCTGTGGT 59 12248423 12250715 TGGGAACTGTGAAGTTCGT 59 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 1 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 2 3 3 80 2R 12905300 12905583 ACATTGCCTTAACCAGAATCC 58 12905240 12905258 TTGTTCTCCATGCCATCGA 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 3 4 4 86 2R 13311460 13311542 TCGTCATAGGAATCTGCGG 59 13311591 13311610 TTACCCATGGAACGTCTAGG 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 2 5 5 182 2R 13400213 13400291 ACTTCTTGAGCCAATCTGG 57 13400436 13400455 GACTAAGGAACTCAGAGTGG 57 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 1 2 4 127 2R 13755953 13755972 CTTCAAGATGTTGCCATCGT 59 13755585 13755802 TGCACTTATCTCCCACTTCG 59 NA Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086786 3 1 2 105 2R 13991256 13991513 GATTTACGCACACGTTTCC 57 13991169 13991188 AAAGTTGGTGCTATCAGCAG 58 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 2 6 6 130 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175123 14175142 AATATTCCACTCGTCCTCGT 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 3 4 4 80 2R 14363666 14363685 GGCTATGTTGGTTAAGTGGT 57 14363163 14363625 ACGTTCATAAGGCGATAATCC 58 NA Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711 2 1 2 89 2R 14512329 14512348 GAAACGCTCCATTACTGGAC 59 14511624 14512278 AAAGAGGGACTGTTGTAGGC 59 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 3 5 5 96 2R 14843623 14843771 CATCGTGAGACTCGTTCAC 58 14843831 14843849 TATCCTGTCGATCTCCACG 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 3 2 3 95 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911798 14911816 TCAGATGCGAGGCTATCAG 59 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0086574 2 1 3 161 2R 14946980 14947108 CAATCAAATAAACGCTGCCT 57 14947232 14947250 CATGAGGACACCTTAAGCA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 3 5 12 170 2R 15062802 15063699 GCAATTCACTTGGACCACG 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 2 2 3 90 2R 15317262 15317337 CAGCAAATGCAATTGTGGA 57 15317389 15317409 TTTCCAGACTTATCAGCATCC 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 3 11 19 82 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361018 ATTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 2 3 3 81 2R 15554183 15554202 ATCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524 1 1 3 157 2R 16889783 16889801 ATCGATGACATGCTAGCTG 57 16889922 16890004 CTGCTACTTAGGTGATGCG 58 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 3 3 3 81 2R 17059013 17059033 CGGTAAATGTTACGGACTCAC 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 CG10069 FBgn0034611 FBtr0071590,FBtr0071589,FBtr0071591 1 3 3 80 2R 17172237 17172255 TCTATCAGATGTGAGCGGA 57 17172298 17172373 TGATACATCAGCAGAATGGG 57 NA Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 2 3 3 137 2R 17181657 17181744 CACTCTGGGTATGGATGTG 57 17181844 17181863 TACAGAGTAACAGGCTTTGG 57 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 1 6 6 80 2R 17299851 17299874 CCCATGATGAAATCTATATCGACG 59 17286797 17299818 CTTTCTCTAGATCTTCGTGTATACC 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 1 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071802 3 1 2 137 2R 17960562 17960726 TCTATAAGCAGAGCTTTGCCT 59 17960378 17960396 GTTCAATATCGGCTTCCGC 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 2 8 8 102 2R 18612064 18612082 AAGGGACAGAACATTCCCA 58 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 jbug FBgn0028371 FBtr0302117 2 1 8 106 2R 18615274 18616644 GAAGAACTATTCCAGCTACGA 57 18615188 18615207 CGTCTGAACTTGAAAGAGGT 57 NA InUTR Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 1 2 2 80 2R 18778566 18778646 TATAAAGGGATTCCTGAGCCA 58 18778687 18778706 ATCTCCATTAAGGTGTGCAG 57 NA Nonspecific Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 2 4 13 84 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 1 4 13 83 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 2 3 4 92 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958196 18958214 TCTTGGTGCTGGTGTACAG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072139 3 2 4 88 2R 19811538 19811557 TAGACCACCATTATGACGCC 59 19811607 19811947 TTGAGAATCGTGATGCTGTG 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 2 2 2 80 2R 19887931 19887949 GTGGTCTGCTTCTATCGTG 58 19887808 19887889 GATCCATCATTTCGATCTGGT 58 NA Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166 2 1 2 81 2R 19921938 19922214 ACTAGAGTACGTGTTTAGAGCG 59 19922256 19922274 TAGCTTCCTGTGCAGTTCC 59 NA InUTR Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 2 2 2 96 2R 20008261 20008279 TGCATCAACGAATCGTTGG 59 20008339 20008427 ACAACCGAGTGTTCTCCTC 59 NA InUTR Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 3 2 2 68 2R 20013301 20013373 CAAAGTCGGCTTCTGTCAC 59 20013251 20013270 TAGACATAGGAGCCGTTCAC 59 NA DesignRelaxed Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 1 2 2 80 2R 20046438 20046510 AGCTCTCCAAATTGTACCAC 57 20046377 20046396 CGGAGATCTGAACAAATCGG 58 NA Nonspecific Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 3 4 4 81 2R 20552130 20552148 GCTAAATCTATCGTCGGCG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072435 1 1 3 89 2R 20660795 20660813 TACTCTTACCGCCACACTG 59 20660516 20660742 TTGTGGCTAACTTGAGCCT 59 NA Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 2 2 2 64 3L 258743 258763 GGACGTAGTTATGTTGGAGAG 58 258848 258866 CGACGATATCCGGGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 3 2 2 83 3L 268393 268411 GGAGAAGTATGGGAGGAGG 58 268457 268579 ATATCGACAAGACAGACCGT 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 81 3L 301612 301630 GAGTCCTACGGTATGGGTC 58 301673 301769 AGAAGCTTATAGCTTCCTCGT 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 2 2 10 103 3L 298045 298063 ACTGTGAAATCGTCACAGC 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 3 3 3 81 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307565 307583 TTTCGCAGCTCAAATTGCT 59 NA Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 1 2 2 83 3L 326089 326107 TCTCATCCCAAGATTCGGA 57 325966 326044 GCGTATATTCTTGTTCTTGGC 57 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072543 3 1 6 120 3L 328343 352691 CGTCATGTGTTTCTATCTGCA 58 352838 352857 GTTAAAGTCACCCAACTCGG 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0301819,FBtr0072570,FBtr0301820 1 3 4 86 3L 344032 344117 TTGCAGGAGAGCATTAGGG 59 343964 343982 GACATTTCGTGTCGTCGTG 59 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626 1 1 2 107 3L 1197303 1197538 AAACAAGAAATGTGGCTCCA 58 1197608 1197626 AGAAATGAGCGCTGTTGTC 58 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072659 1 1 3 102 3L 1262020 1269077 CGAAGTCGATAATGATTGCCC 59 1269141 1269159 GAGGTAGTAGCGCTTCTCC 59 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072659 3 1 3 103 3L 1262020 1269077 CGAAGTCGATAATGATTGCCC 59 1269142 1269160 CGAGGTAGTAGCGCTTCTC 59 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301789 3 1 2 134 3L 1434779 1434798 ATGATACTCGTCATGCAGCT 59 1433358 1434682 GTTGTTGCTCTACGCACTC 59 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 1 3 3 80 3L 1573238 1573258 ACCAGAACTTCTTCATCTGCA 59 1573300 1573555 GTGCGTAGACCTGATAGGG 59 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 2 2 4 108 3L 1881208 1881228 CTATTTGCTCATCTTCACGGC 59 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 3 2 4 161 3L 2941472 2941490 ATAAGAATCAGATGCGCCG 58 2941615 2942574 TTTGCTTTCCTGTGTCGAC 58 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 2 6 6 86 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221696 3221886 AAGTTGTTTGGCTCTGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 1 5 5 64 3L 3300760 3300778 GTACCACCGATCTGGACAG 59 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 2 4 13 81 3L 3516815 3552793 AAATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 CG14985 FBgn0035482 FBtr0289977 3 1 1 74 3L 4003934 4003952 GGAGGAACCCTACATGACG 59 4004161 4004179 CAATTTGTGGCAGCTAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 2 3 3 103 3L 4369893 4369913 CGGTATACACCTTCATGTGGA 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 3 4 4 80 3L 4580095 4580113 CCTGCATTGACTCCTATGC 58 4580155 4586595 TATCCTTTGTGAGAACCTCCT 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 5 6 104 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583713 TAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301105,FBtr0301109,FBtr0301111,FBtr0301106 2 6 11 158 3L 7042047 7043665 CTTCTCAATACGCCAACGC 59 7043785 7044351 ATTCTGTACCCTGGATGAGAG 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 1 9 9 80 3L 7176524 7176542 ATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0076839 3 1 2 85 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324321 7324400 CAGTCTTTACTTCGTCGCTG 59 NA Nonspecific Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 2 11 15 80 3L 7693413 7693497 ACTGTACAAGGAAGTCATCCA 58 7693353 7693374 TTAGCTTCGAATGGTTCTACCT 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 1 5 5 123 3L 8097910 8097989 CTTCTCAAGGTGCATCTGC 58 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 2 2 2 68 3L 8115190 8115208 TACCTGGATATGTGCTCCT 57 8115295 8115313 GAATATGGTCAGCACTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 2 2 2 76 3L 8177588 8177606 GTCTACTAATGGGCATGCT 57 8177474 8177492 ATTCCTTCGGTACTTCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 1 4 5 179 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347121 8347139 TTGTGAGAGTACCAGCGAC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 2 5 13 84 3L 8623725 8627691 TTCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 1 3 13 161 3L 8627811 8627829 CAGTATCATGAAGCAGCGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 3 4 7 80 3L 8904170 8904189 CCATGAACATCTGCAATGGA 58 8904060 8904130 AGAGAAGGAGTTCCATTAAACG 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290105 2 1 5 80 3L 8927557 8927576 GATGGCATGATCATGAGTGC 59 8927400 8927515 GTTACAAGCCTGGTAAACGG 59 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 2 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964099 8964119 GACAAGTTCCTGAATTTGCGA 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 3 3 6 86 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338987 9339006 AGTTGTAGCCTATGTGGTCC 59 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 2 5 5 81 3L 9410806 9410824 ACTGCAGCAGATAACACAG 57 9408558 9410762 ATGAATTATCTCGGCCATGC 58 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0110843 1 2 3 92 3L 9657337 9660812 TTGAGTTTGAGCTCATCGC 58 9657263 9657281 CAGTTTGTAGAGCGCTTGG 59 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 2 2 2 90 3L 9723674 9723692 CATGGCCATCATTGCTGTC 59 9723837 9723856 CTCCTTCCACTCAGATTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 2 3 8 184 3L 9817719 9817740 GAAGAACAACAAGCCAAATGTG 59 9823878 9824110 TAAATGGGACCCTGAGGTG 58 NA Drosophila melanogaster 61 Gap1 FBgn0004390 FBtr0076368,FBtr0076367 2 2 2 88 3L 9835626 9835644 GTGATATACCGCTCCAGGA 58 9834652 9835577 GTTGTGCACAATCTTAAAGCAG 59 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 2 2 4 95 3L 9894107 9894450 ATTCGCTTAAGAATCCCGAG 57 9894508 9894526 TTCTTAACATGTCGGCCAC 58 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 3 3 3 200 3L 10189324 10189344 GAGCCTGATCTAGGAGATCTG 59 10188799 10188926 ATCTTCATCATCGCCCAGG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076290,FBtr0076289 1 2 5 105 3L 10561697 10564184 CAACAGAAGACACAGTACGAG 58 10564251 10564269 CGGCATGTCCATTTGTCAG 59 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161 1 1 2 104 3L 11094310 11094384 CATGAAATCCGGATAGCGG 58 11094224 11094242 CAGCTGGTTCCATTTGTGG 59 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 1 2 2 63 3L 11641364 11641382 CAAATATAGCGACGCCGAG 59 11641260 11641278 GAAGTCGTTTGTCCACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 2 2 6 64 3L 11811197 11811215 TGGTACACAGTCGACAAGG 59 11810716 11810734 ATATCATCGTTCACGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 3 4 4 93 3L 11873251 11873329 GCATCACAGTGTGATAATTCCA 59 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075915 1 1 3 87 3L 12735040 12736014 ACCTGCGCAAAGTATTTCAG 59 12736064 12736082 ATCTCCACCGGATAATCGC 59 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 2 2 2 80 3L 12763433 12763507 GAGTGCATTACAGCAAACC 57 12763371 12763389 AAATCCTCGTTACGCTGAC 58 NA Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 1 2 2 95 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002072 13002091 GTTTCGCTAAATCCAGTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 2 2 2 89 3L 13035389 13035407 CACCAAGATCGTCATGCAG 59 13035459 13035551 GTGATGACATCCATGTAGCC 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 2 2 6 180 3L 14193376 14193395 ATGGGAGCCATAATATGAGC 57 14193538 14193847 TCGTCATCATCTTGAGGTG 57 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0075441 1 1 7 127 3L 16070900 16071928 AGAGCTCAAGCTATTGCAG 57 16072019 16072037 CCTATTTGCTCTTGGCCAG 58 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 1 2 6 140 3L 16108921 16110654 GAGTCCATCGTCTATGACCA 58 16110757 16110775 GTAATCTGCGGCAGTTGTG 59 NA Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 3 2 2 88 3L 16372429 16372447 TTCTGCACTACTTGGTCAC 57 16372299 16372378 GAGGCTATAGAATCCTCCCA 57 NA Drosophila melanogaster 61 nxf2 FBgn0036640 FBtr0089479,FBtr0089478 2 2 2 80 3L 16571599 16571685 CTACTACAAGTACATTAACACGGAG 59 16571543 16571563 CAATTGTTTACCAGGTGTGCA 59 NA Drosophila melanogaster 61 Baldspot FBgn0260960 FBtr0075355,FBtr0075356 2 2 2 82 3L 16652382 16652400 GTGTTCTACTACTGCGGCA 59 16644624 16652336 CGCAATTGGAATCTAGGCC 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 2 2 2 68 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854419 16854439 TGCATGTAAACTGTGAACCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 2 3 3 137 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748786 17748807 TCCTAGAAGGAGCATAGATCAG 58 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100567,FBtr0075111 2 2 3 253 3L 18594637 18594655 CCTATGCCATGACTGAAGG 57 18594291 18594372 GAAATAGTGACCAAGTCCCT 57 NA DesignRelaxed Drosophila melanogaster 61 pip FBgn0003089 FBtr0075007 2 1 12 126 3L 19300191 19300431 ATTTGCACGCATTTCAACTC 58 19300084 19300104 GTATGTAGGCTTCTAACACGG 58 NA Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 1 3 3 80 3L 19751212 19751230 TCACTGGCGATCTCAAGAC 59 19751010 19751171 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 3 2 2 72 3L 20420615 20420633 GGAAGGGCGATATGAAGCT 59 20420509 20420579 ATCAATGTTTCCAGTCGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 1 2 18 172 3L 20812560 20825954 GGAACGCGAAGAACAAGTC 59 20826086 20826108 CCACCTTCTTAACATAGTTGGTG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 3 4 4 83 3L 20959607 20959683 TATTGATGATGCCGTCGAG 57 20959542 20959563 TCACAAGCCAAGTAACTATTCC 58 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0078329 3 2 3 131 3L 20998179 20998197 GAATAAACCGCCACAGGAC 58 20995286 20998084 TTTCCCAGATGTTTGGTGC 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486,FBtr0078487 3 2 2 81 3L 22062292 22062491 AATTGCTTTGTGTTAGGCGA 58 22062230 22062250 GTTGATCCAGGATTCCATTGC 59 NA Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 3 1 1 73 3L 22641074 22641095 AACTGTTGTCATAAAGCAGAGC 59 22641180 22641200 AAGTCGATCTGTTGTATGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0113437 2 1 5 144 3L 22753326 22770214 GACAATGTGGATCAGACGG 58 22770322 22770340 GATACTTGGCCTCTGTCCA 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 3 5 5 126 3R 66130 66148 CAAGAGGACTTGGACTCGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0300936 1 1 2 80 3R 134169 134352 GTTGTGGTATTTGCTGTGC 57 134396 134414 TGGTCTGAGTAGGTTGAGG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 3 3 4 97 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385831 1385849 CTACCCTGGTAAATGCGCT 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078742 1 1 2 80 3R 1434738 1435386 GCAGCAAACCCTATGTTGG 59 1434676 1434695 CAGGGAAGTCCTCGTTAGAC 59 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733 2 2 3 117 3R 1472925 1474226 AGTCGGAGACTATGTTTACGT 58 1472828 1472847 GTAGAAGCACATGACCTTCG 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0301946 3 1 9 81 3R 1827454 1827800 TTATAGCACCAAGAAGACGTG 58 1827393 1827411 GATGGATGTAGTCCTCGCT 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 2 4 4 87 3R 2211842 2211860 AACAAGTACGACACCTGTG 57 2211911 2212066 TGTGATAGGGATGTGAGCA 58 NA Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 2 2 2 80 3R 2283140 2283222 CTCATACAGCAATCTGAACGA 58 2283264 2283282 TAGGCCATGTTGAGTTCGA 58 NA Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 1 2 2 80 3R 2482608 2482882 AGTTTCGGATAAGGGCTATGG 59 2482548 2482566 TTGCCCATCTTGAGATCGT 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089278 1 1 4 134 3R 2565373 2565391 GAGTCGGATATCCGGTTGG 59 2537658 2565275 CTGGAACGAATTCAGCCTG 58 NA Drosophila melanogaster 61 sas FBgn0002306 FBtr0081571 2 1 2 171 3R 3005349 3007282 CGATTCCAGCAAATGGAGC 59 3007415 3007435 GTGGATGTATCGTTACTGGGT 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081805,FBtr0081804 3 2 3 96 3R 4068184 4068202 GATCGTATCGCTTAAGGGC 58 4068004 4068126 GCTACTGCTAGGTTGAATCTG 58 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081846 2 1 3 90 3R 4184116 4184200 AAGGCTGAAGTAGTCCAGG 58 4184254 4184272 CAATCTTCTCAGTCGGCTC 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089784 3 1 8 130 3R 4656718 4657873 ACAACATGAGCGAAATGGAG 59 4656607 4656625 CTCGTGTGGATAACGAGGA 58 NA Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 2 2 2 126 3R 5228660 5228679 TAACATTCTCCAACGCATGG 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 2 2 4 60 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515750 5515771 GCTAGAGGAATAAAGTGAACCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 2 5 9 80 3R 5834565 5835033 CTACGAAGGTTCAAACCGAG 58 5834504 5834523 AGTCGGTGGATATCTCAGTG 58 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 1 5 9 80 3R 5834567 5835034 TCTACGAAGGTTCAAACCG 57 5834505 5834523 GTCGGTGGATATCTCAGTG 57 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0300079,FBtr0300078 3 2 3 85 3R 6640189 6640207 CGGATGCTCCTATAACCGT 59 6640064 6640140 CACTCCTTCTCCCTTCTGG 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 3 3 5 86 3R 7048443 7049127 CAAGAACTGGTACAAGAGCA 57 7049176 7049194 TTCTCGATGCTCTTCTTGC 58 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082473 2 1 2 184 3R 7645326 7645344 GATCTGTCATACCCGTGTG 57 7645558 7645576 AAGTACTTCTCGTAGCGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 2 3 3 102 3R 7792838 7792919 CAGATGCAATCCCTGAATGC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 3 3 3 106 3R 7792843 7792923 TGTCCAGATGCAATCCCTG 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 Sas FBgn0038045 FBtr0082588 1 1 1 68 3R 8252636 8252654 AAATGTGGACTTTACGGCT 57 8252789 8252810 GGAACATTTAGAGCAGAAAGGA 58 NA DesignNoJunction Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0301943,FBtr0290334 3 4 4 85 3R 8346234 8346252 CAACGTGTACAACAGCCTG 59 8345153 8346185 TGGCGTAGTATCTGTCCAC 58 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 2 3 4 83 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338672 8338691 CGATCCAGAATAACACCACC 58 NA Drosophila melanogaster 61 CG11670 FBgn0038114 FBtr0300072 1 1 2 80 3R 8869551 8869571 ATATTGTCGCAGTGAACTTCC 58 8869680 8869945 TTTGCTCTTCCTATGGATGCT 59 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082742 3 1 3 166 3R 9130061 9130080 ATCAACTTGGATGAGTCCCG 59 9130203 9135876 ATGATTGATCTATCTACTCCATCGG 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 3 2 4 189 3R 9462792 9468030 TACGGTTATGACGGCTACG 59 9462176 9462194 TTTAGTAGGGCTGATGCCG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 2 5 5 136 3R 9476211 9476540 ACAAGGGTGACTTTGAGCA 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 1 5 5 135 3R 9476212 9476541 CAAGGGTGACTTTGAGCAG 58 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 1 3 8 92 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 2 3 8 93 3R 9488692 9488711 ATCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 3 3 5 82 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522054 9522555 TGTCGTAGTTTGTATCTATCCG 57 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959 2 1 3 110 3R 10422713 10422731 AATGGAGACGTTCTGTTGC 58 10430212 10430230 ATGATCAGGATGTCGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 2 2 2 80 3R 10717530 10717550 TTCAACACATGCTACAAGGAC 58 10717592 10717684 GAAGAGCATATCCTCGCAC 58 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129 3 1 3 204 3R 11087616 11088284 ATCACAATCAAGCTGGAACG 59 11087431 11087449 TGCGTCTATCTACACTGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 3 2 2 80 3R 11798316 11798425 GCAAGAAGTATTTGGCCCA 58 11798254 11798275 CATACTGCAGGAAGTGAATGAG 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233,FBtr0083229 1 2 6 150 3R 11895704 11895722 TCTGGAAGATCGACTTCGG 58 11894324 11895590 CTTGGCGTTATTTCTCGGG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 2 1 1 120 3R 12978126 12978144 TCTACAAGGGCGACAATCC 59 12978283 12978302 GAGGATCAGTGGTTGACTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083565 3 1 4 84 3R 14073864 14073946 CAGGCAGAAGAAGTAGACCC 59 14073992 14074011 ATTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 2 1 1 128 3R 14231127 14231147 GGATCCCATCAAGATTGTCAG 58 14231299 14231318 TAGTTGTCGTTCAGGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 3 5 5 104 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751701 14751719 ACTGCGTAGATCCTCTACG 58 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 2 2 3 80 3R 15229771 15229791 GTATCAACAAGCCTGAAGACC 59 15229832 15230033 GGCGTAAAGCTTTGTGTAGG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301378 2 1 7 88 3R 15579578 15586000 CACAGGAGTACAGTGTGCA 59 15586052 15586130 ATACTTTAGGCGACCCTGG 58 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 2 2 3 116 3R 15677633 15677757 CCCTGGAGAACTATGTAAACG 58 15677833 15677853 AGTTATCGTAGTTGATCACCC 57 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 2 2 3 82 3R 15873439 15873531 TCTGTTGGGTGGATTTGCT 59 15873577 15873595 CAGCGAATGCTAAGGACTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 2 3 3 85 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 2 1 2 171 3R 16406033 16406120 GTTCAAGCGATATGATGGCA 58 16406316 16406334 GAACTGCGAGTACATGCTC 58 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718,FBtr0299720 2 2 3 83 3R 16679652 16679670 ATCTCCGATGAGGAATGGG 58 16679381 16679608 CAGGAATTCCTTCATGTACTCC 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 2 4 9 112 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798981 16798999 AGTTTCTTGGGCAAGAAGC 58 NA Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 2 1 1 95 3R 16876613 16876631 CCAAGTTTGGGACAGTTGC 59 16876475 16876493 ATACAAGCGCAGAATCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 3 2 2 102 3R 17101293 17101370 AAAGATCACGAGCATCAGTC 58 17101210 17101228 TATATCCTCCGATCGCAGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084066 2 1 22 88 3R 17180806 17200794 ACAGAGGCTCAAGAACTGG 59 17180736 17180756 CGGTTCTTAACGAACTTCTCG 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 2 2 5 81 3R 17350301 17350319 GGAGACTATACTCGCACCG 59 17350361 17351259 CCAAATAATAACGATTGGCGGA 59 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 1 2 2 81 3R 18523054 18523133 CATCCGGCAGATTTATGAATCTC 59 18523174 18523192 AATAGCTCCATCCAGTGGC 59 NA Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 2 2 2 81 3R 18881433 18881519 CAAAGAGATTGTGAAGGATGTG 57 18881373 18881391 GCCAAAGATGATGGAGGTG 58 NA Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 1 2 2 126 3R 19079153 19079171 AGACAGTTATGGACGTCGT 58 19079261 19079337 GAATAGATCTTGGTGCGCA 58 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717 1 1 3 80 3R 19139271 19163628 GGCATCATTAGAAGTTCCCAC 59 19139211 19139229 GATGCCTTCAGTACCTCGT 59 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089717 2 1 3 118 3R 19165904 19165922 TCTGTCCAGCCTAGTTGAG 58 19139272 19163629 TGGGAACTTCTAATGATGCCT 59 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 3 2 2 75 3R 19558364 19558384 GCTCTACCAGAATTTCCTGTC 58 19558256 19558274 CACCACCTCGAGAATCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0113392 2 2 5 124 3R 19799264 19799879 GACTACTCGTGTCCCAGTC 59 19799967 19799985 TGTTTCGATTGCTCAAGCC 59 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113277 2 1 4 105 3R 19816967 19817778 TCCAACTCAACCATCTCACTC 59 19816882 19816900 TCTCCACGAGTGCTTTCAG 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 1 3 5 102 3R 19839340 19856223 ATCCCAAGACTCTGTTCGC 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 2 1 1 61 3R 19874125 19874143 TTACAGTCGGATTGCGGAG 59 19874221 19874244 CATTGCTGACTAAGTAGTATTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 2 4 4 101 3R 20173011 20173134 CAACAAAGCCATCACAGCT 59 20172928 20172946 ATTGTATCCCTGCTGGGTG 59 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867 3 1 2 98 3R 20212192 20212334 GCAGTTGTAGATAACATGGGC 59 20212114 20212132 CACCATGCTCATCTTGGTG 58 NA Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 2 2 2 81 3R 20459212 20459289 GTGGGAGAAATTCATGCGAC 59 20459333 20459351 CATTTCGGTCGCATGAGTG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100638,FBtr0084685,FBtr0100627,FBtr0100636,FBtr0100637 2 5 18 80 3R 20519540 20519558 GGTGTGAGATGTACACCGA 59 20519602 20520692 TGGAGAAACACAGTTCGCT 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299662 2 1 3 165 3R 20866590 20867474 TCCTATGTGTTGTCCTGCG 59 20866443 20866462 CAAGATATAGCGCGACTTGG 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 1 3 3 60 3R 20877256 20877276 ACATCTACAATTGCCTGAGTC 58 20878221 20878242 CCCTTAAAGCTGCTCTTATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 2 3 5 198 3R 21507902 21507921 ATGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 3 3 5 199 3R 21507901 21507920 CATGATCAGTGCCAGTATCG 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 2 3 3 86 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884602 21884620 CGTACTGGTACACCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6154 FBgn0039420 FBtr0300398,FBtr0300399 2 2 2 80 3R 22095466 22095486 TATCAACCACATAAGGGAGGT 58 22095528 22095680 TTGGGCACTAAGTTGACTC 57 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100 1 4 10 109 3R 22402355 22404452 ATCAGTGAGGAGGTTGTGC 59 22404525 22404543 AATATGCCAGGCTCTCGAG 59 NA Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 2 3 3 81 3R 22544516 22544534 GTACTACTTCGCAGTGGAC 57 22544575 22544652 GGACCAATCCTTATGCATATAGG 58 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 1 2 3 118 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687904 22687923 AGTTTACATTCCGTGGTGGA 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 1 4 9 161 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085140,FBtr0085143,FBtr0085139 2 7 12 123 3R 22892190 22892337 ATCGGATACCTTTGTCTTCCC 59 22892087 22892106 GTGTTGGCTTTCATCCTTGG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0112834 3 2 12 93 3R 22892851 22892869 ATGATGAGGGAGTTGTCCT 57 22892166 22892339 CGATACTTGGTATCCGATGG 57 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 1 5 5 80 3R 23392369 23392389 GCGATTCATTTACGAAACGGA 59 23392245 23392329 GCGAATCCGTTGATGATACTG 59 NA Drosophila melanogaster 61 raps FBgn0040080 FBtr0085189 1 1 1 83 3R 23410057 23410075 AAATCAGTCGGATGGATCG 57 23410380 23410398 TTGATCAGGTCCAACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 3 3 3 125 3R 23512758 23512777 AATGACACCCAATTTGTCGA 58 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 2 3 3 125 3R 23512757 23512777 AATGACACCCAATTTGTCGAG 59 23512282 23512672 TTGCCGAATCTTACAATCCTG 58 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 2 3 3 109 3R 24168518 24168608 ACGAGATACCAGAGGTATCGA 59 24168679 24168697 ATCTTTGCCTCGATCACGA 59 NA InUTR Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 2 6 6 66 3R 24426902 24428497 GTGGACAAAGTTGTGTTGCA 59 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 1 4 4 87 3R 24700981 24711987 CTGACACATGCCATACCCA 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 3 4 4 88 3R 24700982 24711988 ACTGACACATGCCATACCC 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 1 2 13 80 3R 24728518 24745223 ACGACTATCTAACAGCAAAGC 58 24745265 24745283 GATGGAGAATGTCTCCGGT 58 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516 3 1 2 204 3R 24867952 24870097 GAGTTTATCTGTCTGCACGT 58 24870323 24870341 GTATAGCAGGGATCCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 3 5 10 180 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24961001 24961025 CTGGAAGAAGATTATAAACACGGAC 60 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 3 3 3 144 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046268 25046286 CTTCTTGAGGAACTCAGCC 57 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 2 4 4 85 3R 25325968 25326047 TGCTATCAGGAAATGTATTCCG 58 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085497 1 1 6 91 3R 25722869 25722889 CTAGATGGTCATGTGATTGGT 57 25722939 25723030 GAGTTTCCAAGTTTAGTTCCAG 57 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 2 2 3 136 3R 26134962 26183983 CAAGTCAAGATTGAGGACGAG 58 26184081 26184099 TAGCGATCGAATACGAGCA 58 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653 3 1 2 80 3R 26316039 26316109 TACCGCAGGTATGTTGAGC 59 26316153 26316171 GTGCCCGAGATAGTCATCC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 3 4 13 197 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421161 26421181 TGATCTCCACAATAGTCTCCC 58 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085705 3 2 4 119 3R 26643824 26643842 GTTATCAGCACGGAACTGC 59 26643925 26650013 GTTGATCGGTGCAACTTCC 59 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 2 3 3 81 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986981 26986999 CGATGAGTTTGTCGAGCAG 59 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 2 1 1 96 3R 27130714 27130734 GCGATCTTCAACAGAATCTGG 59 27129986 27130004 GATTGCGACAGGTTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 2 3 3 80 3R 27501827 27501846 TCACAAATCTATCCCTCGCA 58 27501884 27502040 GATGAAGTAGTCGGTTATCTTGTG 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 3 3 3 82 3R 27661189 27661274 CACTGAGAAATACGGAAAGCA 58 27661318 27661336 GGTAAGACCCATGTTCCGA 59 NA Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 3 2 3 60 3R 17123343 17123362 TAACTGGTGTTTATCAGCGG 58 17123384 17123403 TCAATAGAAGCGACAGGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0300796 3 6 7 142 4 264202 264268 CAATACAAATGCCGTTGCT 57 264373 265823 CTTTCGGAACGTATAAGCCT 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 2 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723 1 1 2 80 4 282672 283013 GCCATTAATGTAGTAAGTCGCA 59 283054 283072 TCCTGGACGACTTATCCAC 58 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 2 4 4 83 4 596940 597611 TTAACGGAAACGATGACCA 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 1 3 6 90 4 636726 636745 ATGAGATCGAAGCATCAGGA 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 3 2 2 81 4 803971 803990 CGTCAACAAATCGAGATCTG 57 803853 803930 GGAGAATTCATTGAAGTGTCTG 57 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 1 2 2 80 4 984839 984860 ACCAGATAGTGGGTCATAAGAC 59 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301335 2 1 2 133 4 986255 992671 CAAATCACGTAAGCTCCGT 58 986140 986161 GTTGTGTATCTCGTTGTAACTG 57 NA Drosophila melanogaster 61 ATPsyn-beta FBgn0010217 FBtr0089187,FBtr0089186 3 2 2 100 4 1052490 1052511 CACACTTCTCAGTTAGTTCGAG 58 1052572 1053543 ATGGCTACGAGACAATTGC 58 NA InUTR Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091631 2 1 3 80 4 1247983 1248073 AATCACAGTACACCGTCGT 59 1248866 1248884 ATCCTCTGAATCACCCTCC 58 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 1 2 4 92 U 1179257 1179277 GTGTTCAGTAAATCTACGGGA 57 1179331 1183277 ACACCTATTGCAAAGCCTG 58 NA Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 1 2 2 80 X 40879 40955 GCCAGAAAGTACTTCAAAGCC 59 40819 40843 GGATATTATACCAGAAATGCTCCAC 59 NA Drosophila melanogaster 61 cin FBgn0000316 FBtr0070064,FBtr0070065 1 2 2 80 X 150606 150624 TATGCCATGAAGTCCACTG 57 150665 150806 CAAAGAATTAGGTGAATCTCCG 57 NA Nonspecific Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100579 1 2 8 127 X 165180 165200 CTATGTACCAGTCGGTAATGG 57 163390 163473 CATTCTCCACAGATCAAGGG 58 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070249 2 1 3 92 X 1120307 1127846 TTTACCTCGAGAGTCTGGTC 58 1120234 1120252 ATCTGGTCAGCAGGTAGAG 58 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 1 3 3 80 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 1 1 1 216 X 1374105 1374123 CTCCTCGACGATAACCTCG 59 1375090 1375108 TTGAATGCCGTCATCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 2 5 6 152 X 1383714 1383732 GACAAGCATGGCATCAAGG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 Edem1 FBgn0023511 FBtr0070352,FBtr0070354,FBtr0070353 1 3 3 95 X 1800262 1800350 GGATATGCAACGATTCGCA 58 1800185 1800205 CAGCAGATAAAGGTACTTGCT 58 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 3 2 3 81 X 1821880 1821898 GAACCTTCGTCATCAACGA 57 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 1 2 2 282 X 2011721 2011739 CAAAGACGTCAGCGATGAG 59 2011394 2011412 TTCATCCAGTCTGTCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 2 2 2 80 X 2629129 2629220 GGGATATACTGGATCCGTCG 59 2629068 2629087 CGATTTCCTGGAACTTGTGC 59 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 1 4 4 80 X 2816307 2816325 TGAGTCCCTTGGAAAGACC 59 2816369 2816460 CTCCACCGAATTCTCCTCC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 1 4 12 121 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 2 2 3 131 X 3373524 3373542 CATTGGGTTTAAGGCCACG 59 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 2 2 2 259 X 3685573 3685591 ATCAAGAAGATTGTGCCCG 58 3685814 3685832 TCTTCTTCACCGCACTCTG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 1 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015955 4016107 TCTAGCTGTCGAGTAGTCGT 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070665 2 1 3 86 X 4035860 4035879 TATCGCATTGAACTGAAGGC 58 4030793 4035811 GACGTCAATTCCTCGTGTC 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 2 3 5 84 X 4248514 4248532 AGAACTTGCGTCTCATCAC 57 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 2 2 5 84 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247639 4247988 ATCTAGCCAGATCTTGGCTG 59 NA Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 1 1 1 160 X 4543646 4543664 TACATATTGCCGGTTTGCC 58 4543446 4543464 GTGACTTATTGCCCGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 3 3 3 131 X 4554210 4554300 ACACAGATCGTGGTGATATCC 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 89 X 4844925 4845008 GGAGGATTTAAGCTCTCCCA 58 4845060 4845078 TTGGAACTGGCTTGAACCT 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 1 3 4 80 X 5214528 5214601 CAAATAATGGGCTATCCGGG 58 5214467 5214486 ACCATTGTATTCGCTTTCCA 57 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 3 4 4 80 X 5317036 5317157 TTAGAACACTACCAGACACCT 58 5317199 5317217 CTCATAGCACCAGATGTCG 57 NA Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 3 2 2 84 X 5549754 5549772 CTATTGGTCGTCATGGGCA 59 5549630 5549712 AATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852,FBtr0070851 2 2 3 88 X 5559773 5559791 GCTGGAGGACTTTCTCCTG 59 5559502 5559721 AACGGTAATCGGGAATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 3 2 2 118 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567273 5567292 CATCACAATGTAGACGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 3 2 2 82 X 6132165 6132183 CCAGATGACTATCAGGCGG 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 CG33667 FBgn0053667 FBtr0302416 3 1 1 127 X 6366390 6366409 GGCAAGTAAGGTTCGATCAC 59 6366223 6366241 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 3 4 6 124 X 6456388 6470831 TAGTCAAGGCGTGAAGACC 59 6470919 6470937 GTGTAACTGGTGCTGAGGA 59 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0112956 3 1 6 108 X 6702367 6702855 CATACAAGCCACGTTTGGG 59 6702925 6702945 GAGATATTCTCGTGGGATCCC 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 1 4 21 110 X 6981688 6986743 TTTAAGATGGCGAGTGGTG 57 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0100208,FBtr0100217 3 3 21 87 X 6978688 6978707 GTTCCAGCAAATGTACCACC 59 6975076 6978638 CCATAGCTCCGTCTCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0300771 1 1 2 82 X 6980001 6981654 CCGGAATGTCACGTTATGC 59 6979937 6979955 ATCATTGTAACCACGACGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071119 1 1 6 100 X 7937754 7937947 ACAAATGTCCAATATGCTGGG 59 7937674 7937692 CACCACCAAAGTTGCTACC 59 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071169 3 1 3 90 X 8138521 8140141 AAGTATAATGGATCCTACGACTACG 59 8140189 8140207 CTCCATTGAGGACTGCCTC 59 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 1 5 5 80 X 8409417 8409506 CTTCAAAGGAGTTCCCTATGC 58 8409545 8409566 GCAAAGATGAACAGAACATTGC 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 3 2 6 82 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8445793 GGTAAATTGTCCTGTATCGCC 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 2 4 6 117 X 9005031 9005126 GAGCATGGATTTAATCCAGC 57 9005449 9005467 GAATCTGTCGGATGAGGTC 57 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 2 3 3 106 X 9048444 9048462 ATTTCAAGACCGATCTGCG 58 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 1 2 2 131 X 10983472 10983559 GATTCCTTATCGACCCTCGG 59 10983653 10983671 GTTTCCAGGCATTGGATGC 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 3 3 4 119 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055181 11055199 AATGAGTGTCGTCTTTCCG 57 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0090002 2 1 3 83 X 11592559 11592579 TGTCTAGTCGTTGATCCTTCG 59 11592624 11593367 TTGCTCGAACAGCATTTGG 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 1 3 5 196 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607538 11607556 CTCGAACTGTTTGGTGCTC 59 NA InUTR Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 3 4 4 141 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698359 11698377 GGTCAACTGATTCTTGGCG 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451 1 1 2 121 X 11775925 11777229 GACGATGAGACATACAGACG 58 11775823 11775842 AGATTCGCCTCAAAGATCTC 57 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 2 4 10 85 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 1 4 4 97 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910897 ACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 3 2 6 91 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534865 12537916 GTGTCGTTCAGCTGATCTG 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 82 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 3 4 9 119 X 15714518 15714536 CAAGTCAGTTCGCACATCC 59 15717249 15717335 ATCATAGAAATCTTGGGACGTG 58 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161 2 1 3 93 X 15831777 15833078 AGAGCATAAGTTCCATGGGA 58 15831703 15831721 CCAAAGCGATCCTGAACAC 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 3 6 9 188 X 16270359 16270691 GAACAGTGGTATCTGAATGGC 59 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 1 6 9 185 X 16270362 16270692 CAGTGGTATCTGAATGGCG 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 2 3 3 125 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281649 16281728 GATGCCTTGGTGTAGAAGC 58 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069 1 1 3 128 X 16326625 16326643 AATACATCGTGAATGCGGA 57 16326735 16327206 CTTCATCATCGAGTGTCCC 57 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0290121 3 1 4 82 X 16377762 16377780 GGAATTCACGATACACGGC 59 16377129 16377716 AGTTGCCAATCATCGTTGC 59 NA Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 1 2 2 80 X 16444493 16446388 CGATATCGAAGTCAAGGATCTG 58 16444434 16444452 TCCATCGGATAGGAGACCT 58 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074385,FBtr0290020,FBtr0074384 2 3 3 242 X 16997709 16997886 TGATGACATTTGGCGTTGC 59 16998092 16998110 ACTCCTTGACGATCTCCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32563 FBgn0052563 FBtr0074391 2 1 1 68 X 17102641 17102660 TAGTACGTGGTCATGCTGTG 59 17102752 17102770 TGATGTGTATGGGTGGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 1 4 4 229 X 17198190 17198208 CAAGTGAATGCTCAGCAGC 59 17198401 17198746 ATCATCCAAATGGCATCGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074431 3 1 2 143 X 17317880 17320137 TGTAGATGCTCCCAACTGG 59 17320244 17320262 GTCCAGATAGACGGGTGTC 59 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 3 3 3 90 X 18316518 18317538 GCATTCAAGGTTATCCTCTCC 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 2 2 5 110 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455729 19455747 TGATCTGCTTGAGGAACGA 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074777,FBtr0301308 2 2 5 80 X 19455820 19456736 GAGTTCATCCAGATTGAGACC 58 19455760 19455780 GGTAAATTCCAGATCAAAGCG 57 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 2 3 3 114 X 19508312 19508330 GTTTCCTCTACTGCAACGG 58 19508408 19508485 ATGAATGCGTCAATGGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 1 2 13 95 X 20105915 20105933 CAGGCTACGAACATTCCAC 58 20103228 20105857 ATTGTATTCATCATCGCCGT 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 2 2 13 95 X 20105914 20105932 AGGCTACGAACATTCCACC 59 20103227 20105857 GATTGTATTCATCATCGCCGT 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089642 1 1 2 103 X 20299146 20299164 GTAGACTGTGGATCGCCTC 59 20299005 20299080 AAACTTAATGTCGGGATCGC 58 NA Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 2 2 3 160 X 20543397 20543922 TAAAGACATCGCAAGTCCG 58 20543255 20543273 ATTGGTTGGAATCCTCTGG 57 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 2 3 3 84 X 20804408 20804428 CCCAATTTGAGAATGGTCAGG 59 20804254 20804272 AAATAACCGTTGGCAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 2 5 5 80 X 21228146 21228164 GGAGAGCTACAATGTGGTG 57 21228206 21228295 ATGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 1 5 8 82 X 21247629 21247647 TAATACGCGCCTATCTCGT 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 1 5 5 80 X 21473852 21474021 ATCTATGGTCATGGAGCGC 59 21473790 21473808 CGACGTTTGAATGTCCACC 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349 3 1 5 93 X 21867277 21867295 CACAGCAACACATACACCA 58 21867352 21868012 TCTCGCCAACGTACTATCG 59 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807 2 1 2 169 XHet 47479 51924 GTTACTCAGGCCAAAGCAG 58 52056 53590 AGTTGATCCACCGTAAACAG 58 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 2 5 5 60 XHet 66315 67541 CTATAGCTGCACGATTGCC 58 66273 66291 CTGTCCTCTACATCCACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724 3 1 5 80 XHet 75478 75499 AAACGCTAAACAATCAGGAGTG 59 69220 75442 GTATCGTCGGATTCGAATTATCTC 59 NA InUTR Drosophila melanogaster 61 tRNA:S7:23Eb FBgn0011985 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M3:46A FBgn0011921 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3255a FBgn0082928 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-14 FBgn0046827 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-31a FBgn0067685 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:763 FBgn0065084 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:L:UUR FBgn0013699 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070634,FBtr0070635 2 2 2 60 X 3753643 3753664 ATTACAGACTTGTGCTTTCTCC 58 3753604 3753625 TTCATAGGCTTTGTTACACCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300446 3 1 2 102 X 657549 657567 ACTAAGTACCCGCTAGTGG 58 657016 657483 GTACTTCTCCTGATCCCGT 58 NA Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903,FBtr0111134 2 2 2 60 X 22414488 22414506 GGCAACAAGACTGATTTGG 57 22414446 22414465 CATATTGAAGGGCCTCATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1678 FBgn0031176 FBtr0077219 3 1 1 79 X 21273593 21273611 GAATACCTCAGGGACCTCC 58 21273532 21273550 GGAAGAGTCTTCGGAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lcs FBgn0028583 FBtr0077220 3 1 1 60 X 21267911 21267929 ACTACAGAGTCCTCTACGG 57 21267869 21267889 TTTATTCTGTGGAGGATGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077242 3 1 2 92 X 20913641 20913660 TATTTACACGGGTCTCATGC 57 20914747 20914765 GGATCGTCGAACTTGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG1532 FBgn0031143 FBtr0077268 3 1 1 91 X 20898828 20898847 AACAATGGTGGGTTATGGAC 58 20898040 20898776 AATCATTGCCCATTTCGTAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1835 FBgn0031127 FBtr0077277,FBtr0077278 3 2 2 114 X 20539511 20540146 GCAGCAATTGTGTTTCTATGG 58 20540221 20540240 GACTGTTGTCTCTACTGCCT 59 NA Drosophila melanogaster 61 CG12703 FBgn0031069 FBtr0074795 3 1 1 80 X 19650936 19650954 CTTGGGTGAGTTGAAGCTG 58 19650996 19651081 TAGTACGTGTAGCCGTTTAGG 59 NA Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 2 2 2 121 X 19601491 19601580 GAACTACAATGGAGCGCAG 59 19601388 19601406 TCTTCTTCAGCGTTGTCGA 59 NA Drosophila melanogaster 61 CG14218 FBgn0031031 FBtr0074770 3 1 1 81 X 19474952 19475037 AACCTACTGATACCTTCTTTAGGTC 59 19474895 19474914 TCAACTAAGTCTCCGCTGTC 59 NA Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082,FBtr0074784 1 2 2 84 X 19382828 19382846 TCACGGATCCGTATTACGG 59 19382709 19382781 ATGATGCTGACTTGAATCCG 58 NA Drosophila melanogaster 61 CG7053 FBgn0030960 FBtr0074635 3 1 1 60 X 18686404 18686423 GATGAATCGGCACGATTACG 59 18686446 18686464 GAAGATCAGGTCCAGTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300206 1 1 9 60 X 18266545 18266564 AGGATGTTAGTGCAGAAGCA 59 18267072 18267090 ATTGGCCTGTATCACGGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6106 FBgn0030914 FBtr0074553 3 1 1 121 X 18253030 18253104 TTATACGCAGGGTGCTACG 59 18253187 18253207 GACATTGGGATCAATCAGACC 58 NA Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 2 2 2 81 X 17992535 17992626 CAAGCTGTGAATGATATACCTACAC 59 17992478 17992496 GACGTTCCAGCTGAAAGTC 58 NA Drosophila melanogaster 61 mei-217 FBgn0028581 FBtr0299824 3 1 1 119 X 17035784 17036307 ACACTGGTCCTACAATCGA 58 17035471 17035489 TTGGTATTCACTCATGGGC 57 NA Nonspecific Drosophila melanogaster 61 CG9086 FBgn0030809 FBtr0074415 2 1 1 87 X 16854232 16854250 TCTTGAGCTTCTACGAGCG 59 16854095 16854181 TAATGAGCCTCCAACCTCG 59 NA Drosophila melanogaster 61 CG9125 FBgn0030793 FBtr0074352 2 1 1 106 X 16696669 16696687 GAGGCAGAGGAGTTCATGG 59 16696494 16696599 TTGAAGTCAACTGGCTCCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cyp1 FBgn0004432 FBtr0074238 3 1 1 161 X 16214179 16214198 TCGAAAGCGTCAAAGATGAG 58 16212566 16212584 GTACCCGAATCCCTTCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 caz FBgn0011571 FBtr0074217 2 1 1 80 X 16186610 16186629 GTGATGGTGACTGGAAATGC 59 16186669 16186932 TGGGAGTCTTACATCTATTGCA 59 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 1 2 2 79 X 15782410 15782428 TTAAGTGCCGTGGAAATGG 58 15782274 15782293 AATAGCTTACCAACCAGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8206 FBgn0030679 FBtr0074085 2 1 1 60 X 15633866 15633884 ACAATCTGGGACTGTTCAC 57 15633905 15633926 GTACTGATTCCAGAGCTAATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0136 FBgn0026666 FBtr0074084 1 1 1 107 X 15628444 15628462 AAAGGCCGGAAGTTAATCC 57 15628633 15629143 CTTTAGGCCAACCATGTCC 58 NA Nonspecific Drosophila melanogaster 61 CG8119 FBgn0030664 FBtr0074051 3 1 1 60 X 15556643 15556661 CGACCAACAATCTGGAGAC 58 15556685 15556703 CAGATCGATGGACGAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11655 FBgn0030638 FBtr0074031 1 1 1 266 X 15348631 15349010 TTGTTCTCCTGGCAGATCG 59 15349238 15349258 CCGGTTGTACAGATAAATGCC 59 NA DesignRelaxed Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 3 2 2 84 X 15293118 15293253 GCCTAATGGTATACGACGAC 58 15293053 15293073 GGTATCAGCGCTATCATATCG 58 NA Drosophila melanogaster 61 PPYR1 FBgn0030623 FBtr0074023 3 1 1 60 X 15138424 15138443 TCGAAGGGATGAAGTTACCA 58 15138383 15138402 TCCTCCGATGAATCGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15030 FBgn0030621 FBtr0074000 1 1 1 60 X 15109830 15109848 TACGATTTGGAGTGCTCCC 59 15109872 15109890 AAATTCAGGAGCGGATCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33177 FBgn0053177 FBtr0073962 3 1 1 87 X 14975766 14975784 AGGATTTACGCCTGAGTCG 59 14975976 14975994 TCTAGGTCGTTGCGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967 3 1 3 102 X 14966671 14967381 AAATGACATGCCAGTTCCC 58 14966587 14966606 GACATTTCGATAGACGCGAC 59 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073931 3 1 3 159 X 14474871 14474962 GATCACCGAGTTTCAACTCC 58 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA Drosophila melanogaster 61 CG32614 FBgn0052614 FBtr0073867 2 1 1 60 X 14026099 14026120 CTTTAACATCAAGATGCTAGCG 58 14026139 14026159 CATGTCAACCTCATTTGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 3 4 4 80 X 13726824 13726845 ATCCAGATATGAGCCAATTCGT 59 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 2 4 4 80 X 13606930 13607025 CCATGATTAGAAGACTGATTGAGG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 dmrt11E FBgn0030477 FBtr0073768 2 1 1 106 X 13263266 13264044 CATGGAAGAATACAAACAGCG 58 13264112 13264130 CCTCCATGACATGGTTCAG 57 NA Drosophila melanogaster 61 CG32640 FBgn0052640 FBtr0073728 1 1 1 60 X 13072180 13072198 ACCGACGAGGAAATCAGAC 59 13072219 13072240 TCTTATCCGGATGGTAAATGAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 hep FBgn0010303 FBtr0073749,FBtr0073747 3 2 3 136 X 12974590 12974678 CACCGAAGATACGTTTCGG 58 12974472 12974490 ATCGTACGGTAGATGCGTC 59 NA Drosophila melanogaster 61 CG12717 FBgn0030420 FBtr0073704 2 1 1 60 X 12656752 12656771 CAAGAAACAGAAGAAGTGCC 57 12656711 12656731 AGAACTAGCAGCTTGAATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15728 FBgn0030409 FBtr0073674 1 1 1 80 X 12521638 12521720 AAAGCCATATCCACCAGGT 58 12521763 12521782 GGATCAGGTTGAGCATTGTG 59 NA Drosophila melanogaster 61 CG11356 FBgn0030375 FBtr0073635 2 1 1 80 X 11997079 11997220 CGATGTAAATATGCAGGTTTGG 58 11997020 11997040 CGATGTCTATGAACTTGAGCT 58 NA Drosophila melanogaster 61 CG34323 FBgn0085352 FBtr0112525 1 1 1 80 X 11964625 11964648 CGACTATATGTCGAGATATCATGC 59 11964684 11964760 CCATTATTGGTTTCCATCTCCT 58 NA Drosophila melanogaster 61 wisp FBgn0260780 FBtr0073573 2 1 1 80 X 11792389 11792696 TTTACGCCCAAATGGATTGG 59 11792736 11792757 CATCGTTGATGTCGTGATACTG 59 NA Drosophila melanogaster 61 inaF-C FBgn0085350 FBtr0112523 2 1 1 216 X 11625326 11625346 TTCTTTCTGTCCATCTACCAC 57 11621344 11621362 CTTCCGATGAGTTCAGGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0090002,FBtr0301501 1 3 3 80 X 11591269 11591356 CCTACATAATTGATCTGCAGGA 57 11591397 11591415 GTTCACCTTTGGGACACAG 58 NA Drosophila melanogaster 61 CG15196 FBgn0030296 FBtr0300849 3 1 1 88 X 11304350 11304369 TAAACCGAAGCCGAATAGCA 59 11304415 11304503 CTACTAGGTAAGCATTTGGATGTG 59 NA Drosophila melanogaster 61 CG1657 FBgn0030286 FBtr0073448 2 1 1 96 X 11227172 11227266 ATCATCAACTGCATCTCGAG 57 11227325 11227343 CTACGTATATGAGCACGGG 57 NA Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 3 2 2 94 X 10644117 10644197 CGTCAAGATCCAACTCAAGC 59 10644042 10644060 ACTCCTCGTTGTAGATGGG 58 NA Drosophila melanogaster 61 CG32676 FBgn0052676 FBtr0071503 1 1 1 80 X 10611418 10620964 AACTGGTTTATTGGCTCAACG 59 10611358 10611378 AAATCATTAACCTGTGCGTCG 59 NA Drosophila melanogaster 61 CG2887 FBgn0030207 FBtr0071459 3 1 1 60 X 10371728 10371747 TTATAATCCGGGACAAGCCA 58 10371687 10371705 GTGTACAGCAGATTGTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071413 3 1 4 165 X 9893323 9895894 ACATCACCAAGCAAATCGA 57 9896022 9896041 CTCTTAGAGCTCTCATCGTC 57 NA Drosophila melanogaster 61 CG15251 FBgn0030166 FBtr0071427 3 1 1 130 X 9864484 9864502 CTATCGGCACTGCTATCGT 59 9862128 9864391 ACACTTAACACCTCCTCTGC 59 NA Drosophila melanogaster 61 mxc FBgn0260789 FBtr0071332 2 1 1 110 X 9136247 9136369 CAAAGCATGCCTGAACTGG 59 9136155 9136175 CGACGGATTGTTAACAGTCAC 59 NA Drosophila melanogaster 61 mei-P26 FBgn0026206 FBtr0071303 1 1 1 80 X 9064559 9064751 CCCATGTAAAGGTTTCCCG 58 9064793 9064813 GATGATTATTCTTTGCCAGCG 58 NA Drosophila melanogaster 61 fh FBgn0030092 FBtr0071348 1 1 1 112 X 9042770 9042788 CTACTTCGAGGAGCTGACG 59 9042607 9042625 TGATCACATAGGTGCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071266 3 1 2 81 X 8799586 8799605 TTCAACTTCGAGAGTCTCGG 59 8799404 8799542 TGCGACATGGTGATATCCT 58 NA InUTR Drosophila melanogaster 61 Hexo2 FBgn0041629 FBtr0071249 1 1 1 164 X 8606135 8606223 GAACTCACTGGAATCCCGA 59 8606351 8606369 CACCAGTGCGGAATAACTG 58 NA Drosophila melanogaster 61 Cp36 FBgn0000359 FBtr0071203 2 1 1 63 X 8373394 8373412 AACTCGGTCTCTGGTTTGG 59 8373528 8373546 CCATAGTTAGCGCTCACCA 59 NA DesignNoJunction Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 3 6 7 102 X 8131882 8131901 TGGACTACCACTTCATCACG 59 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 mys FBgn0004657 FBtr0071105 2 1 1 117 X 7958772 7958790 TATGTCTCGACCATTCCCA 57 7959557 7961104 TCACCTCGTTAGAGAAGCT 57 NA Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 3 2 2 80 X 7582478 7582496 ATTGATCAGTGCCGGTACC 59 7582354 7582434 GGTGTAGAAAGCACATGCG 59 NA Drosophila melanogaster 61 CG1999 FBgn0029947 FBtr0071054 2 1 1 104 X 7252977 7253172 GTGTATATCTAGAATCATGCAGCG 59 7253234 7253253 GTCCTTCGAAGGTCAATCCA 59 NA InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 3 7 21 82 X 6982619 6982638 TTTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 CG4586 FBgn0029924 FBtr0071003 2 1 1 139 X 6864998 6865124 CATTGCCACCAGGTATTCC 58 6865227 6865245 ATACCAGGCGATAGGACAC 58 NA Drosophila melanogaster 61 CG4557 FBgn0029912 FBtr0070994 1 1 1 119 X 6739097 6739115 GCATTGTGATAATCGCCAG 57 6739198 6739284 TGGTGGAGTCATTCAAGTG 57 NA Drosophila melanogaster 61 CG33667 FBgn0053667 FBtr0302416 3 1 1 68 X 6366273 6366350 TTGACTACTCCGAAGCGAG 59 6366223 6366241 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG3815 FBgn0029861 FBtr0070899 1 1 1 91 X 6189579 6189754 TCATGGAGCAAATCAAGCAG 59 6189808 6189826 GTAGTACGGATGCTTCGTG 58 NA Drosophila melanogaster 61 vanin-like FBgn0040069 FBtr0070879 1 1 1 80 X 6094737 6094755 TGCAAGATAGTTTGCTGCC 58 6094612 6094696 CTTGGACATAGCTATCTTCCGT 59 NA Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 3 2 2 119 X 5803873 5803954 ATTGAGATGACCCGATTGCT 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 CG15764 FBgn0029817 FBtr0070820 2 1 1 60 X 5763333 5763353 ATGGCTATACATCTCTGGAGG 58 5763375 5763393 CTAGTCGTGAGCAACTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12239 FBgn0029810 FBtr0070814 1 1 1 214 X 5687970 5687988 GAGGAACGAGTAGACCGTG 59 5688166 5688245 AGTGCATGACCAAATCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG4078 FBgn0029798 FBtr0070807 2 1 1 80 X 5644998 5645104 ACTCAAATGTCTCGAGTATCGA 59 5645143 5645163 GCTTGTGAATCTTCACCAGAC 59 NA Drosophila melanogaster 61 Rab-RP4 FBgn0015794 FBtr0070849 3 1 1 82 X 5565535 5565643 AAGTCCAGTTTGATACGTCG 58 5565472 5565490 TTGCTCTTGAAGTCCATGC 58 NA Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 1 2 2 104 X 4793478 4797991 CACAATTGGCTATGGAAACGT 59 4798057 4798075 CTGCTCAGGTAGACCAAGG 59 NA Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299602,FBtr0299601 2 2 2 60 X 4676649 4676668 GACAAGACATTCGATCACCG 59 4676608 4676627 CGTGTCGTACTTTAAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12692 FBgn0029703 FBtr0070658 1 1 1 80 X 4195723 4195843 CATTTGTCCGGTGAATTGCT 59 4195662 4195681 AGTCTCATCCAAGTGTAGGC 59 NA Drosophila melanogaster 61 CG12691 FBgn0029701 FBtr0070646 3 1 1 60 X 4160359 4160378 AGATCACAGTAAGCCTCCAC 59 4160401 4160419 CGATAGTTCTTCACTCGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15576 FBgn0029700 FBtr0070661 2 1 1 60 X 4146485 4146506 CGTTTCATGATCAATATGCGTG 58 4146446 4146467 CTCCCATATTTAATTCCGTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301823,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 7 7 86 X 3593051 3593155 ATAGTAATGGAGCGGGCAC 59 3593205 3593223 TGAGCAGGTCATAGCACTC 59 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 1 2 3 80 X 3408481 3409291 GTGGAAACTTGGTGTCGAG 58 3409335 3409353 CTTTAGGCAGAAGTGCCAG 58 NA InUTR Drosophila melanogaster 61 CG3621 FBgn0025839 FBtr0070386 1 1 1 127 X 2066705 2066723 TTTAATCCAGCGCATTCGG 59 2066914 2066932 AGAGTAGATGCGATGGACC 58 NA DesignNoJunction Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 3 3 3 80 X 2003625 2003771 TATTGCCATACGACCACAC 57 2003814 2003833 AGTTGGCATTGATGTACTCG 58 NA Drosophila melanogaster 61 Pgam5 FBgn0023517 FBtr0070366 1 1 1 85 X 1766929 1767013 AGGCATCTCAGTTCCTTCG 59 1766862 1766881 CTTCTCTTGGTCGGGATAGG 59 NA Drosophila melanogaster 61 a6 FBgn0023130 FBtr0070279 3 1 1 199 X 1589741 1589759 GCTCCTCTCAAGGAAATCC 57 1589495 1589578 TTCTGGTTCATGTCGAGTG 57 NA InUTR Drosophila melanogaster 61 Mur2B FBgn0025390 FBtr0070284 3 1 1 80 X 1451795 1451958 GGTTCGATTACAATAATCGCTG 58 1451736 1451756 AGACATAGTAGTACTGCTGCT 58 NA Drosophila melanogaster 61 CG32810 FBgn0025394 FBtr0070260 3 1 1 117 X 1408817 1408901 CTAACCCAGATGATCTCAACG 58 1408980 1408998 CTTTGGATACCACGCACAG 58 NA Drosophila melanogaster 61 CG14780 FBgn0025383 FBtr0070257 2 1 1 125 X 1366842 1366922 CTGTACAACAATCAGAGAAAGC 57 1367008 1367026 CATGTAGGCCATGGAACTC 58 NA Drosophila melanogaster 61 CG14785 FBgn0027795 FBtr0070231 1 1 1 112 X 1350141 1350159 TCTTCCTCTGCATTGTCGG 59 1349974 1350068 AAGGAATATCTCGATCTCCGAG 59 NA Drosophila melanogaster 61 CG3708 FBgn0040345 FBtr0070190 3 1 1 60 X 823426 823444 GAGAGCCTAATGGATGTGC 58 823384 823404 ACTGAAAGATGACCATGTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0070122 3 1 2 89 X 541547 541649 GAGGTGAAGAAGTGGAACG 58 541766 541785 CAAGTCCATGATGTGGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG3176 FBgn0029524 FBtr0070078 3 1 1 86 X 376389 376407 GATGGATCTCTGCGAGGAG 59 376454 376559 CGATTACCAAATAAAGTCACGC 58 NA Nonspecific Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947 1 1 2 80 X 371254 371272 GCAGCGGAAGGTATTTGTG 59 371314 371649 ATTGTCTTCTCATGGACCTCC 59 NA Drosophila melanogaster 61 ac FBgn0000022 FBtr0070072 1 1 1 60 X 264202 264220 GTTATCCGGAGAAATGCCC 58 264244 264262 GGCTGAAGCCATTGTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 1 2 2 80 X 40879 40955 GCCAGAAAGTACTTCAAAGCC 59 40819 40843 GGATATTATACCAGAAATGCTCCAC 59 NA Drosophila melanogaster 61 CR40561 FBgn0085744 FBtr0114194 1 1 1 62 U 7865708 7865726 CTGTTCTACGACAGAGGGT 58 7865664 7865682 ATATGAGAGGCCGGAAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 3 4 4 82 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383643 TTGTAGAACTGTGCAACGAG 58 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0089142 3 1 3 97 4 270759 270830 TTTACGACACAAAGTCGGC 58 270680 270701 TATATTAACAGAGCAAGCCAGG 58 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462,FBtr0113463 1 2 3 80 4 270357 270432 GGTTCACGTATTAACTGGTGAG 59 270298 270316 ATCATTGCAGTGAAAGCCC 58 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 3 7 7 94 4 258102 258120 GAGCTCGACTTACACAGTC 57 258177 260950 TTAGCGGATTCTTTACTGGC 58 NA Drosophila melanogaster 61 snoRNA:Me18S-G423 FBgn0086052 FBtr0114328 1 1 1 60 3R 3901377 3901398 GATAGACAAATTATGTGTCGGC 57 3901417 3901437 AGGAAGGCAGTAGGTAATAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-2 FBgn0084688 FBtr0113491 1 1 1 60 3R 12590340 12590363 CAATATAAGTGCGGTGATAAGGTC 59 12590303 12590321 TTGCGGTGACAAATTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1774 FBgn0039856 FBtr0085798 2 1 1 68 3R 27419012 27419030 CTCTGGAACGATGGTGGAG 59 27419119 27419137 GTATGGTATCCCACGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34155 FBgn0083991 FBtr0111047 2 1 1 144 3R 26382662 26385709 AGCATAAATTGCTGGTACCAC 59 26382538 26382556 GACTCCAGATGTCATGGCT 59 NA InUTR Drosophila melanogaster 61 Jon99Fi FBgn0039778 FBtr0085652 2 1 1 68 3R 26314913 26314931 GATCATCGGAAACACCTGG 58 26314963 26314981 TTGATGGTCACTCCACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15534 FBgn0039769 FBtr0085644 3 1 1 172 3R 26257904 26258142 TTGTATCAGCCAGCATAGC 57 26258278 26258296 GAAGAACTGGTCCGTTGAG 58 NA Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085589 2 1 2 104 3R 25881512 25881593 TAAGTTAATAGGCGGCAGC 57 25881426 25881444 ATCAGTTGCTTCTTGGTGG 58 NA Drosophila melanogaster 61 CG7911 FBgn0039735 FBtr0085606 2 1 1 103 3R 25829781 25829802 CCGTAGCTTAAGACCAAATGTC 59 25829614 25829717 AGTTCATCTCGACCTTGCC 59 NA Drosophila melanogaster 61 CG15515 FBgn0039719 FBtr0085500 2 1 1 125 3R 25731746 25731764 TTCTGGACTACGTCTTCCC 58 25731910 25731928 TCATGATCACGCCCATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ets98B FBgn0005659 FBtr0085224 3 1 1 215 3R 23570245 23570323 TATCGCAGGATCCCAATGG 59 23572161 23572180 AGGCCATCTTCCAAATTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Ets98B FBgn0005659 FBtr0085224 1 1 1 214 3R 23570245 23570323 TATCGCAGGATCCCAATGG 59 23572160 23572179 GGCCATCTTCCAAATTTCCA 58 NA DesignRelaxed Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 3 1 1 86 3R 23305530 23305610 GAAACTCTACGCCATTATACCA 58 23305657 23305675 GACAAATTTGGGATTGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 Hmu FBgn0015737 FBtr0085164 1 1 1 87 3R 23115327 23115345 TCTACTGGACGGACTCCTC 59 23115396 23115750 TATTTGAAGAGACGGCCGG 59 NA Drosophila melanogaster 61 CG34006 FBgn0054006 FBtr0100061 1 1 1 87 3R 23045015 23045033 AAGGCTCGAGGAATCTTGG 59 23043886 23044967 CGCTCATAAATGAAACCTTTCG 58 NA Nonspecific Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 2 12 12 160 3R 22891749 22891834 ATCGAAGAGTGCGAAGGAG 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 CG31082 FBgn0051082 FBtr0085022 3 1 1 60 3R 22411306 22411326 AACTCACCGGACAATATTCTG 58 22411348 22411366 TCTCACGCAGCAAATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 2 10 10 91 3R 22400427 22400445 TTTCATATCCCGCATCACG 58 22400500 22400588 TATCGTTGCCGTTAATCGC 58 NA Drosophila melanogaster 61 CG5432 FBgn0039425 FBtr0085006 1 1 1 200 3R 22240461 22240482 AGAAGGTCAACGAAATTCTCCT 59 22240642 22240720 AAAGTACTCCCATTACGGCC 59 NA Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983,FBtr0302197 3 2 2 94 3R 21750474 21750492 TTCATCCAAAGTCTGGCAC 58 21750307 21750416 GGAAAGCGACTTAATGTGC 57 NA Nonspecific Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 CG42503 FBgn0260229 FBtr0300637 3 1 1 197 3R 20952804 20952822 ATCATACCGCCACTGAGTG 59 20952564 20952582 CTATCGTAGGCCTCGTACG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 OstStt3 FBgn0011336 FBtr0084786 2 1 1 80 3R 20892898 20892921 GTTCAATAGACCATCACTGAAGAC 59 20892787 20892861 CGACGCTTAGAGTTCTTTCTC 58 NA Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 1 2 2 81 3R 20607107 20607180 ATGACTTCGCTAACGTGGT 59 20607225 20607243 AACAGATCGATGTCGTGCA 59 NA Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 2 2 2 85 3R 20313318 20314187 GTGATCAGATCGATTTGAAGCA 59 20314233 20314251 ATAGTACTCACGCAGGTCG 59 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084622,FBtr0084621,FBtr0113280 1 3 3 85 3R 20210140 20210160 CAGAAGAAGGATAATGCCGTC 58 20209977 20210093 AAGCCATGTCCATCCAGAG 59 NA Nonspecific Drosophila melanogaster 61 CG5715 FBgn0039180 FBtr0084634 2 1 1 120 3R 20119722 20119740 TTACCAGCCAGGAATTGGG 59 20119564 20119582 GACTTTCCGCTACCAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17786 FBgn0039167 FBtr0084572 1 1 1 60 3R 20043412 20043430 AACCGAAGATGTCCAATCC 57 20043370 20043388 AGATGGTAAGATGCTCCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10301 FBgn0039106 FBtr0114504 1 1 1 80 3R 19536108 19536132 CTATTTCCGGAGATCATGAATAACC 59 19536169 19536254 CGGATAGAGACAAACTCCCA 59 NA Drosophila melanogaster 61 SPE FBgn0039102 FBtr0084440 3 1 1 119 3R 19513342 19513421 AGGATTGTTAGCTACACCGA 58 19513503 19513521 CATGTTCTCGGTAAGTCCC 57 NA Drosophila melanogaster 61 CG13822 FBgn0039098 FBtr0084434 3 1 1 103 3R 19503801 19503820 GAACCACGGCAGAAATACTG 59 19503881 19503977 GTCGTAAGGATCAAAGTCATTCTC 59 NA Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 3 1 1 93 3R 19364260 19364279 CAAGGTAACGATGGTCACAC 59 19364126 19364207 ATTCTGCATAAGCTGGTTTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4408 FBgn0039073 FBtr0084431 1 1 1 60 3R 19188181 19188201 ATGATCATGTTTCCCTACGGA 59 19188141 19188162 CAGTCAGATCGTGATAGTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17083 FBgn0039070 FBtr0084383 3 1 1 60 3R 19112730 19112750 ATCAATCTCTACAACTCGGTG 57 19112690 19112714 CCATATTGCTAGATTCCGTATACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wda FBgn0039067 FBtr0084387 2 1 1 81 3R 19081342 19081437 ACTATCGCCCATGAGTGAC 59 19081279 19081301 GGAACTATTGACAGTAAGCACAC 59 NA Drosophila melanogaster 61 CG6733 FBgn0039052 FBtr0084352 1 1 1 80 3R 18923559 18923637 GATGTTGACTATACTGCCTGTG 59 18923676 18923696 AGGATAAACCACTTCAACAGG 58 NA Drosophila melanogaster 61 CG17109 FBgn0039051 FBtr0084351 2 1 1 97 3R 18921533 18921613 AATGTGGATTACACCGAATGTG 59 18921671 18921689 ACAGGCTTCTTCTCCACTG 59 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 1 4 4 80 3R 18614228 18614309 ATAGTTTCTATGCGGATCCCA 58 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA Drosophila melanogaster 61 CG31139 FBgn0051139 FBtr0084321 3 1 1 89 3R 18574657 18574676 TAATCCTCTCCTGCACTTGC 59 18574532 18574609 CAAAGTCGTAGCTGGTATTTGAG 59 NA Drosophila melanogaster 61 Dcr-1 FBgn0039016 FBtr0084324 1 1 1 80 3R 18560351 18560370 CTTAACGATGTGATTGACCG 57 18560227 18560312 GGACAATAAGTAGTACTCCTCAC 57 NA Drosophila melanogaster 61 CG6972 FBgn0039008 FBtr0084305 1 1 1 80 3R 18529247 18529265 CACTGATGAACTACGCCCA 59 18529306 18529386 AGAGATTGCACATAAACATGGC 59 NA Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483,FBtr0084259 1 2 2 60 3R 18319051 18319069 GGGCGCAAGAACATAAGAG 59 18319092 18319111 CCTTCACAGACACTTCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7054 FBgn0038972 FBtr0084254 1 1 1 99 3R 18291390 18291470 TCCAATACTACTCGCACAGG 59 18291532 18291550 GGGCCTGGTAATAATTGGC 58 NA Drosophila melanogaster 61 CG7080 FBgn0038941 FBtr0084203 1 1 1 74 3R 18155101 18155119 ATGGCTGTTAGTCTCGACG 59 18155226 18155244 ACGAAAGGAGTCTGTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15498 FBgn0038892 FBtr0084122 1 1 1 103 3R 17394130 17394148 CCAAGAGGCTGAACCTCTC 59 17393987 17394065 GCCACAATTCTTATGGGACAC 59 NA Drosophila melanogaster 61 CG10827 FBgn0038845 FBtr0084048 1 1 1 80 3R 16831302 16831477 CAGGATACTCGTACCGTGG 59 16831240 16831261 TTAGAACCATGTATGGTTTGCC 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 3 4 4 127 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450606 16450774 GGTGGAGAAACTTTGTGCG 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 2 1 2 83 3R 16405907 16405982 ATTCGAACTTTATCCTGCGC 59 16406027 16406114 CATATCGCTTGAACGTCAGC 59 NA Drosophila melanogaster 61 CG4783 FBgn0038756 FBtr0083823 2 1 1 113 3R 15774258 15774334 CAGCAAAGCTTTATTAGATCCG 58 15774407 15774426 ATTCTGAGTAACCACCTTGG 57 NA Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0302327 1 1 3 81 3R 15689903 15690054 AAAGCAAGTCGAATCAGCG 59 15689840 15689858 ATTGCGACTATAGTCGCGA 59 NA InUTR Drosophila melanogaster 61 CG31220 FBgn0051220 FBtr0302358 2 1 1 83 3R 15475705 15475725 GCATAATGACTACGATCCAGC 59 15475769 15475851 ATCGTATATCGCACTGGCTC 59 NA Drosophila melanogaster 61 sqz FBgn0010768 FBtr0083733 2 1 1 167 3R 14993956 14993974 AACAGCAAATGGTCATGGA 57 14994105 14994303 GATTCGGGTCGTACTTCTG 57 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368,FBtr0089367 2 2 2 98 3R 14550958 14550976 AGCTGATCAGGCAGTTCTC 59 14551035 14554514 AGTAATAGGCCCAGTTATCCTC 58 NA Drosophila melanogaster 61 Gos28 FBgn0044871 FBtr0083661 1 1 1 109 3R 14490711 14490801 GATTTCCAGTCTCATTCAGCG 59 14490872 14490890 AGTTGAAGGCGTAGAGCAG 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637,FBtr0290107 1 2 5 125 3R 14399185 14399203 GTTCCCGTGTGAAATTGCT 59 14412042 14412063 CTCTTTCTTGGGATTCTTTGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10864 FBgn0038621 FBtr0083654 2 1 1 60 3R 14236562 14236580 ATTCACCGTGATCTATGCC 57 14236520 14236539 CATGTTGAGGAAGTACAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 1 2 7 259 3R 14000713 14000731 TATTCTACACGCCACCCAC 59 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG14322 FBgn0038532 FBtr0083476 3 1 1 81 3R 13494651 13494670 AACTCAAACTGGTCGTTTCG 59 13494711 13494792 CGAAGATGTGACGATCTTATCG 59 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0300767,FBtr0083502 2 2 2 60 3R 13436768 13436787 GTGGATCGTACCACAATCAG 58 13436727 13436750 GAGTACTGTGACTGACTATAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14329 FBgn0038525 FBtr0083463 2 1 1 77 3R 13435888 13435906 GTACTACGATTCTGCGGGA 59 13436019 13436037 ATTCCGTTTACTGTGGTGG 57 NA DesignNoJunction Drosophila melanogaster 61 Hmx FBgn0085448 FBtr0273220 3 1 1 87 3R 13385844 13385862 ACTTATCACTCCGATCCCG 58 13385910 13391191 CGATATGAAACCCAATCTGGAC 59 NA Nonspecific Drosophila melanogaster 61 SF1 FBgn0025571 FBtr0083456 3 1 1 81 3R 13367453 13367472 GACCTTCATTCCTGGAATGC 59 13367513 13368147 TTGAAATTGAACTAGGTAGGCC 58 NA Drosophila melanogaster 61 m-cup FBgn0038488 FBtr0083414 1 1 1 80 3R 12971771 12971855 ACAACTTTGCCGATAAGACTG 59 12971711 12971729 TTGTGTTGACATCAACGCC 59 NA Drosophila melanogaster 61 CG3995 FBgn0038472 FBtr0083428 2 1 1 95 3R 12868326 12868400 TGGAGAAGGGCCTTAAAGG 59 12868249 12868267 CGAAGTAAGACTGGTGCCA 59 NA Drosophila melanogaster 61 CG18213 FBgn0038470 FBtr0083429 3 1 1 84 3R 12865223 12865308 TAACCAGAATACGACCGCA 58 12865157 12865175 GATTATCGTTCCCTCCGCT 59 NA Drosophila melanogaster 61 CG18213 FBgn0038470 FBtr0083429 2 1 1 84 3R 12865223 12865309 ATAACCAGAATACGACCGCA 59 12865158 12865176 ATTATCGTTCCCTCCGCTG 59 NA Drosophila melanogaster 61 CG14893 FBgn0038451 FBtr0300865 1 1 1 92 3R 12446581 12446599 GAAATGGACAACGGCATCC 59 12446650 12446732 CTTCTCAATAATCACCTTTCCCAG 59 NA Drosophila melanogaster 61 CG17565 FBgn0038424 FBtr0083286 2 1 1 60 3R 12259203 12259284 CAGTTTCTAAGCAACTGCCG 59 12259307 12259325 CATACTGTCCAGGTCCTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42446 FBgn0259917 FBtr0300198 2 1 1 95 3R 12185482 12185503 GAAGGGAATACGATGAAATGAG 57 12185354 12185429 TGTACATAGAGTCTCGTTTGTC 57 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216,FBtr0083215,FBtr0100595 2 3 3 87 3R 11827970 11827989 GAAAGTGGTTCATTGGTGAC 57 11828036 11828140 GTGGTTTCATATCGTCATTGAC 57 NA Drosophila melanogaster 61 CG31088 FBgn0051088 FBtr0083241 2 1 1 90 3R 11776534 11776555 CAAGAACTGTCTATGCAATGTC 57 11776403 11776485 CCTCTTGCTGATGTAGTACTC 57 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 Acyp2 FBgn0038363 FBtr0083174 3 1 1 161 3R 11618603 11618621 AGATCTTTGGACGAGTGCA 59 11618867 11618945 CCAGCCAATGTTTCATTTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG5205 FBgn0038344 FBtr0083147 2 1 1 89 3R 11315159 11315177 GGAGGAATTGGACGAACTG 58 11315229 11315306 ATCAGAATGTTCACCTTGCC 58 NA Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 2 1 1 114 3R 11165160 11165178 ATTTCAGGAACCGGATCCA 58 11164872 11165082 GATACGAGATGTACCAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4334 FBgn0038312 FBtr0290018 1 1 1 102 3R 11095234 11095252 ATCCATGACAGGCACTCTG 59 11095315 11095467 AAACAGAACCTTTGTGGAAGAG 59 NA Drosophila melanogaster 61 Rad17 FBgn0025808 FBtr0082974 3 1 1 80 3R 10488029 10488138 GAAGAGTTACTAGAAGAGTACACG 58 10487972 10487990 CAATCCTCGAGATTTGGCA 57 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 2 2 3 112 3R 10418461 10418479 AATTCTTGCAACGAGACCC 58 10418555 10418734 GATTTGCTACTTGTTGGCG 57 NA Drosophila melanogaster 61 CG14854 FBgn0038238 FBtr0113233 1 1 1 80 3R 10385348 10385432 ACCAGTTGGTTTGTATGGGA 59 10385287 10385309 GTATTGTCCATGTACTGGAACAC 59 NA Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082785 3 1 2 281 3R 9251711 9251730 GCAGTTCTACAGCGAAAGTG 59 9252513 9252532 TTTCAGGGTGAGGATACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 3 6 6 80 3R 9204502 9204739 TGCCCTACATCTACAATCCT 58 9204441 9204460 GGTCCAGTTCACTTACATCG 58 NA Drosophila melanogaster 61 ry FBgn0003308 FBtr0082704 3 1 1 99 3R 8858518 8859347 AATGGAAAGAAGGTGACCGA 59 8859409 8859427 CACATCCCAACTTCGTTCC 58 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290273 3 1 3 81 3R 8793089 8793184 CGATCGAAATACCAGAAACGG 59 8793028 8793049 CCATATGTTTGAGTTTCTCCGA 58 NA InUTR Drosophila melanogaster 61 CG31345 FBgn0051345 FBtr0082689 3 1 1 88 3R 8637491 8637681 TGTTCTCCAGATTCGACAC 57 8637361 8637381 ACGCGAATTATTCATAGGAGG 58 NA Drosophila melanogaster 61 CG12279 FBgn0038080 FBtr0082656 3 1 1 81 3R 8530990 8531072 CATAAACATTCCACTGAGCGA 58 8531115 8531133 CTTGACGCGTCCATAAGTC 58 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112655,FBtr0112654 1 2 3 108 3R 8212110 8212236 TCTGGCTAGATTGCTCCTG 58 8212308 8212326 ATCAGGCAGTTGTTCTTGG 58 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112656,FBtr0112654 3 2 3 80 3R 8228195 8228270 CATTGGAAGTTGTGACCACC 59 8228313 8228331 CTGCTGAACTTTCGATCCG 59 NA Drosophila melanogaster 61 CG3313 FBgn0037980 FBtr0082555 1 1 1 80 3R 7841113 7841198 CAAAGGAATTGTGTATCCGGAG 59 7841054 7841072 TAGCAGTGGGTGTAGATGG 58 NA Drosophila melanogaster 61 CG3397 FBgn0037975 FBtr0082504 2 1 1 96 3R 7809870 7809889 TATGTTCGACTATACGGCTG 57 7809738 7809812 GTCATGAACCTGTAGTACGT 57 NA Drosophila melanogaster 61 CG14731 FBgn0037964 FBtr0082478 2 1 1 82 3R 7757603 7757625 CGTCTTTCAGTTCTAATACTGGG 59 7757665 7758002 ATCAAGTCCCTTACTCGACTG 59 NA Drosophila melanogaster 61 Fer3 FBgn0037937 FBtr0082435 2 1 1 72 3R 7519833 7519851 CATACCAAGAGCTCATCGC 58 7519713 7519731 AAAGGAGTTACTTGCGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14711 FBgn0037922 FBtr0082416 3 1 1 80 3R 7449435 7449512 CCAATGTAGTCAAGGCCGA 59 7449553 7449574 AGATGTACTCAATGTTGTCAGC 58 NA Nonspecific Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082393 3 1 2 151 3R 7289474 7289760 TTACAAAGGAGGAAGGAGCA 58 7289874 7289892 CCCAATGGCTGTAGTAGCT 59 NA InUTR Drosophila melanogaster 61 CG14701 FBgn0037883 FBtr0082353 1 1 1 80 3R 7057830 7057919 GATTTCAGATCTCCAAGGAGG 58 7057961 7057979 TGACCTTGATGACTAGGGA 57 NA Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 2 2 2 60 3R 7043273 7043349 CGTGAGACATGAAAGGGAG 58 7043373 7043391 GATCTCCCACTTGGATTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4565 FBgn0037841 FBtr0113216 1 1 1 72 3R 6679091 6679111 CGAATAGACTGTCCCATACCA 59 6679200 6679218 AGCATAACTCCTCCTTGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG33784 FBgn0053784 FBtr0091785 2 1 1 80 3R 5893832 5893910 CCATTAAATCTACGACTTGCG 57 5893950 5893970 CTACGGTGACATTAAAGAGGA 57 NA Drosophila melanogaster 61 CG8526 FBgn0037759 FBtr0082142 3 1 1 85 3R 5627499 5627517 GATTGAGTTCTGCCCACTG 58 5627565 5627645 TGTATGTCTTTCCCACTTCG 57 NA Drosophila melanogaster 61 MtnA FBgn0002868 FBtr0082158 1 1 1 202 3R 5609958 5609976 TCAATCAAGATGCCTTGCC 58 5609510 5609529 GACATTTATTGCAGGGTGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpS29 FBgn0037752 FBtr0082136 1 1 1 85 3R 5604364 5604382 GTCTGATCCGCAAGTATGG 58 5604430 5604507 TTAGTCCAGCTTCTTGAAGC 57 NA Nonspecific Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 2 2 2 83 3R 5597065 5597085 ACGCATTGCTATTATTGGAGG 58 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051,FBtr0082052,FBtr0082054 1 4 4 82 3R 5194233 5194251 GGAGATCTTCTCCAAGGGC 59 5194106 5194189 TACGATATCCCGTATCGATGC 59 NA Drosophila melanogaster 61 CG18005 FBgn0037660 FBtr0081995 2 1 1 125 3R 4889160 4889178 ACGGAGAAGAACGAGAAGG 59 4888988 4889007 TTTGTAATCGGGTTCATCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11985 FBgn0040534 FBtr0082006 3 1 1 60 3R 4840818 4840836 AACTACTTTGCCATAGCGG 57 4840776 4840796 GCTCCATCAGATTAAATCGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11693 FBgn0037570 FBtr0081860 1 1 1 60 3R 4134874 4134892 TTATGCAGCTCGACTGGAC 59 4134832 4134850 GGACAAGGTAGCCTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 3 2 2 197 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625525 3625543 CGTACGACCTGTACATGTG 58 NA Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081617 2 1 2 237 3R 2942401 2942419 CTTCCAGTTCAGTACTCGG 57 2941369 2941387 TTGAAGCAGTTCTTGTGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dfd FBgn0000439 FBtr0081621 1 1 1 114 3R 2627073 2627358 TGAATGAGTGCATTCGTTCC 59 2627435 2627453 GATCCCGGATAAGAGCTGG 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0290296,FBtr0081671 3 2 2 60 3R 2569637 2569657 GTCGAGTTAAACGTAGAAGCC 59 2569597 2569617 TCTTTGATTTCTCCGAAGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081686,FBtr0081685,FBtr0081684 2 4 4 80 3R 2478391 2478480 AACATTGAAGCTCATCGCT 57 2478524 2478542 GTACTGCTCACAGTTGGTG 58 NA Drosophila melanogaster 61 TfIIFalpha FBgn0010282 FBtr0081719 2 1 1 139 3R 2207317 2207411 TCCAGTGAAGACGAACCAG 59 2207514 2207532 TCCTTGTCCGACTCATCAG 58 NA Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 1 2 2 114 3R 1185261 1185709 GGTGATATTCGCAATTTGCCT 59 1185167 1185185 TAATCGGCTGACAAGACCC 59 NA Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 1 2 2 131 3R 1183002 1183091 GAAGCTTCCGAACTGATCC 58 1182889 1182907 TTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 CG33293 FBgn0053293 FBtr0078824 2 1 1 140 3R 1066279 1066362 GAGATTCCTTCCATTATGGAACG 59 1066161 1066179 ATTCCTCAGCTCAACCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 2 2 2 97 3R 1046104 1046123 TAGAGACCAACGAAGAGCTG 59 1046181 1046266 GGTTACGTTCTTAAGGTGGTG 59 NA Drosophila melanogaster 61 CG14650 FBgn0037252 FBtr0078926 3 1 1 91 3R 265964 265982 TCATCCTCGCAAGCTAACC 59 266036 266124 AAATGTCACCATCTTTGGCG 59 NA Drosophila melanogaster 61 CG1074 FBgn0037250 FBtr0078925 1 1 1 80 3R 261159 261238 CATAATAACAGATCCTCCCTATGG 58 261277 261295 CTAGTGTTGGCCTTTACGC 58 NA Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0078978 3 1 2 74 3R 92881 92900 TTTCGACTACGTCTGTAGCC 59 92992 93010 ATAAGATCGCCCATTTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 2 1 1 85 3L 20446593 20446616 GGAGACACTTAGAAATATTCTGGG 58 20447043 20447252 TCCTTTAAGGGAGATCAAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11133 FBgn0037205 FBtr0078559 2 1 1 60 3L 22897791 22897811 ACTTCCTAACAATGTAGCGAG 57 22897831 22897851 CTCTAAGGTAGTCATGGTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(3)04053 FBgn0010830 FBtr0078535 3 1 1 97 3L 22732552 22732763 AACTAGAGGCGGAACTTCG 59 22732473 22732492 TTCACTGTCTCTACCAGGTG 58 NA Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524,FBtr0078523 1 2 2 60 3L 22711289 22711310 ATATGTTGGATATGAGGCAGAG 57 22711330 22711349 TTATCCATAATCTCGCCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14456 FBgn0037176 FBtr0289975 2 1 2 94 3L 22680897 22680915 CAACATCGTCGAAACCTGC 59 22681034 22681053 TGTTGATGAAGTAGGAGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 2 3 3 80 3L 22282028 22282110 GGGAAAGCCCAAATACACG 59 22282154 22282172 GTGCCAGCAAGAATGTGTC 59 NA Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089579 1 1 2 111 3L 21827827 21827845 CAATGAGAAGACCGCTCAG 58 21827918 21828179 GTCATTCTTCTGTTGCTCTCC 59 NA Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450,FBtr0078451 1 2 2 241 3L 21739978 21739996 CAGAGGGAGTTCTCCTTCC 58 21739703 21739774 TCCATGTCCAGTTCAATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG7158 FBgn0037116 FBtr0078462 2 1 1 110 3L 21670143 21670280 GATCATTGAAGGTTTCGGC 57 21670051 21670069 TCCTTACAGTGCATTTCGT 57 NA Drosophila melanogaster 61 CG9391 FBgn0037063 FBtr0078417 2 1 1 115 3L 21260332 21260350 CAGTGAATTCGGTACCACC 58 21260174 21260192 TATTGAGAGCTGCCGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10565 FBgn0037051 FBtr0078323 1 1 1 88 3L 21127997 21128473 GAGATACTGGGCACATCCA 58 21127927 21127945 TCGATGTCGTTCTGTGAGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Gr77a FBgn0045474 FBtr0078281 2 1 1 130 3L 20730873 20731357 CAACTCAGGCACACTATGC 58 20730761 20730779 TCTAGTATTGCACCCACGA 58 NA Drosophila melanogaster 61 CG13251 FBgn0037014 FBtr0078243 3 1 1 84 3L 20631426 20631444 TACACCATCAAGGGACGAC 59 20631491 20631751 TATAGCAGTATCCATCGGCC 59 NA Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078200 1 1 2 80 3L 20468587 20468678 GAAGAACACAGATATCCTACAATCC 59 20468712 20468734 GTAGCTTATCGGATAGATTGCTG 59 NA Drosophila melanogaster 61 CG5262 FBgn0036988 FBtr0078230 3 1 1 101 3L 20422687 20422708 CGTAATGTTCTATCTCTGCCTG 58 20422481 20422626 GTTTGGTCACATACGACGTC 59 NA Drosophila melanogaster 61 CG6663 FBgn0036969 FBtr0074843 1 1 1 80 3L 20315023 20315044 CTGATGTAGAAGTCAAGCTTCC 58 20315083 20315160 TTAGTCCAGCGTCATATACGG 59 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074853 2 1 3 117 3L 20212751 20213453 GGATGCAAGCAATCAATATGAG 58 20212655 20212673 ATGTATCCATAGCCCGACC 58 NA InUTR Drosophila melanogaster 61 CG6981 FBgn0036945 FBtr0074821,FBtr0074820 2 2 2 93 3L 20181854 20182104 CTGAAGCTGATCATCAATCTGG 59 20182158 20182176 CGTTTAAGTTCCACGTGCC 59 NA Drosophila melanogaster 61 CG7328 FBgn0036942 FBtr0074864 2 1 1 60 3L 20133007 20133026 ACCACCTATGAGGACTTCAG 58 20132966 20132984 CCTCGAAGTGTACCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14185 FBgn0036936 FBtr0074818 1 1 1 88 3L 20099532 20099550 GACACTGGACGAGCTACTG 59 20099669 20099687 CTGTGTAAGAGATCACGCG 58 NA DesignNoJunction Drosophila melanogaster 61 trc FBgn0003744 FBtr0074922 1 1 1 90 3L 19825926 19825944 GAAGTCGCATCGAACAGAC 59 19825797 19825872 CTTGGAGTCCATCGGACTG 59 NA Drosophila melanogaster 61 trpml FBgn0036904 FBtr0074952 2 1 1 60 3L 19709988 19710008 GCCTTCTCACATCTATTCCTG 58 19709948 19709966 GCGGATAACTCTCCACCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9330 FBgn0036888 FBtr0074940 3 1 1 93 3L 19580839 19580857 GTAGTTTCTCACGATCGCA 57 19580912 19580991 CATAGTTTCCCTTGTATGCCT 57 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044,FBtr0290043 3 3 3 116 3L 19486753 19487450 CTACAGTCCCGATTCGGTC 59 19486655 19486674 CTATTCCACTCCATGTCGGT 59 NA Drosophila melanogaster 61 CG6836 FBgn0036834 FBtr0075023 3 1 1 105 3L 18947759 18947841 GATACATGGTATGGCAAATGC 57 18947908 18947926 AAGAAGAACATGACCTGCC 57 NA Drosophila melanogaster 61 CG13022 FBgn0036679 FBtr0273313 3 1 1 60 3L 16931925 16931945 ATGGCGATAGATTGGATAGGA 58 16931885 16931903 GAATCCAGAGAAGATGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 3 2 2 136 3L 16777686 16777705 GAACACATTGTGCAATCTGG 58 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 retinin FBgn0040074 FBtr0075375 2 1 1 94 3L 16325083 16325160 TCTAGATTGTTCCTGCCCG 59 16325218 16325236 AGAGCCACAAGATTCGAGG 59 NA Drosophila melanogaster 61 CG33060 FBgn0053060 FBtr0075374 1 1 1 87 3L 16324152 16324170 TTAGAATCGCCCACTGGTG 59 16324221 16324559 TCTTATTCGGACTGTGGCC 59 NA Drosophila melanogaster 61 CG13058 FBgn0036610 FBtr0075372 1 1 1 207 3L 16321973 16322079 CATCACGGTTGTTTGCCTC 59 16322246 16322268 CTGGTGATGATTAACAATCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33258 FBgn0053258 FBtr0301030 1 1 1 67 3L 16076165 16076183 TACGCCTTCTTGTGTCCTC 59 16076282 16076302 TTGTCGTGTATTCACTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5830 FBgn0036556 FBtr0075521 3 1 1 92 3L 15988161 15988247 TCCAGACAATGCAGTTCCT 59 15988087 15988107 TTGCTAAGCTTCTCAAAGAGC 59 NA Drosophila melanogaster 61 Eig71Eg FBgn0004594 FBtr0075573 3 1 1 80 3L 15650983 15651002 TATTGCGGACGAAATAACCG 58 15651042 15651119 AACCATAGTTACTATGCACGAG 58 NA Drosophila melanogaster 61 CG16979 FBgn0036512 FBtr0075563 3 1 1 172 3L 15569703 15569721 AACATTTACTCGGGTGGGT 59 15569915 15569934 GGAGTAAGGTACCTTCTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 3 1 1 81 3L 15490374 15490460 GTTACGTTGAGCTCTCCGT 59 15490503 15490523 CTTTGAAGTACCTTGAGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Msh6 FBgn0036486 FBtr0075646 1 1 1 83 3L 15150251 15150269 TTGGGTGAGTTTGAAGACG 58 15150122 15150207 CTCATTAAGGAACAATACTGGC 57 NA Drosophila melanogaster 61 NHP2 FBgn0029148 FBtr0075698 2 1 1 60 3L 14794962 14794984 TGGACTTAAGGATGTACAGACTC 59 14794864 14794942 AGCAAAGATGCAAATGCCA 59 NA DesignRelaxed Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0100443,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 9 9 80 3L 14746560 14746738 AACAGAGAAACCACGTTCAC 58 14746499 14746517 CGGGATTGACGAATGACAG 58 NA Nonspecific Drosophila melanogaster 61 Sox21b FBgn0042630 FBtr0075747 2 1 1 134 3L 14109453 14111555 GTTAAGAGCGGGCATAACG 59 14106674 14106692 AACTTGTCCATCTGACCGG 59 NA Drosophila melanogaster 61 blue FBgn0041161 FBtr0075781 1 1 1 80 3L 14040886 14040962 ATGACTAATGTGCGTTCCG 58 14040824 14040844 ATACTGTTCGATAACGGTGAC 58 NA Drosophila melanogaster 61 ptip FBgn0052133 FBtr0075784 1 1 1 80 3L 14015210 14015290 TCATCTGCTAACTGCTTGGA 59 14015149 14015167 GGATCGGATAAGTGTCGCT 59 NA Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 1 4 4 80 3L 12805309 12805389 GCTTTGCTCAATACGTATAAGC 58 12805429 12805448 CTCCCTTGGCTTAACATCAG 58 NA Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 2 2 2 80 3L 12781717 12790790 TCATGGAGTATTGCAATGGC 58 12781656 12781675 AGAGTCTAACGGTATCCTCG 58 NA Drosophila melanogaster 61 CG10654 FBgn0036294 FBtr0075971 3 1 1 80 3L 12499579 12500337 GCAGGAGATTGAGGAAGTC 57 12499517 12499539 CTAGAAATGGATAGCTTCTCCTG 58 NA Drosophila melanogaster 61 CG10418 FBgn0036277 FBtr0075954 2 1 1 80 3L 12329937 12330018 ACGACCTCAGCATATGTGG 59 12330059 12330080 GATCTGTGACACTGATATCCGT 59 NA Drosophila melanogaster 61 l(3)j2D3 FBgn0011335 FBtr0075991 3 1 1 90 3L 12110189 12110209 AAATGGCTAGGGAGATGAGTC 59 12110256 12110352 GCTTCTATTCTATACTTTCGCGAC 59 NA Drosophila melanogaster 61 CG42397 FBgn0259748 FBtr0300506 2 1 1 91 3L 11966869 11966887 TTCTACTCTGTCGGAACGG 58 11966741 11966760 GATCCACTTACAAGGAGTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Muc68E FBgn0053265 FBtr0076063 3 1 1 60 3L 11961362 11961380 GCGATTCTACCCTATCACC 57 11961320 11961341 GTGGTACTTGTAGAAACTTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7252 FBgn0036226 FBtr0076041 1 1 1 61 3L 11940817 11940835 GAAGAATGCGACCAATCGA 58 11940920 11940938 AAGACCTCCGATAAGCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32091 FBgn0052091 FBtr0076106 1 1 1 80 3L 11633283 11633760 GATTTCGGGTTTCAGACGC 59 11633802 11633822 TCGTCCTGAGTGATATAGCAG 58 NA Drosophila melanogaster 61 CG7368 FBgn0036179 FBtr0110884 2 1 1 80 3L 11596578 11596666 CCAACAGAATGTGGTGCTG 59 11596707 11596728 GGTATACTAATGGTTGTCGTGC 59 NA Drosophila melanogaster 61 rt FBgn0003292 FBtr0076146 2 1 1 89 3L 11579897 11579917 AATCGATCTCTTCAGTTGGAC 57 11579597 11579846 TCATCGAATACGATGTGCG 58 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696,FBtr0302700,FBtr0302698 1 5 5 82 3L 11216597 11216615 ACTACTACCACGAAACGCC 59 11216661 11216817 ATCCAGATAGGCACCTGTG 58 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 1 3 3 85 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 1 3 3 80 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188026 10188044 TCGCCGATAATGTCATCGT 59 NA Drosophila melanogaster 61 CG6685 FBgn0036062 FBtr0076355 3 1 1 80 3L 9961134 9961217 AATGGCATTCTCCAGTATGTG 58 9961074 9961093 GTTTAAGCTAACGGAGTCGC 59 NA Drosophila melanogaster 61 CG14168 FBgn0036044 FBtr0076374 1 1 1 112 3L 9786491 9786636 ATGTCCTTGGGATCTTCCC 58 9786397 9786415 TTGACGGTTCTCCTTGTCC 59 NA Drosophila melanogaster 61 defl FBgn0036038 FBtr0076403 2 1 1 100 3L 9718022 9718040 TTTCAGCTGCGTAAGTACG 58 9718104 9718179 ATGGGATTTATCTTGGGCG 57 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773,FBtr0089492 1 2 6 80 3L 9339779 9339797 GCCATTTAAACTTCCGGTC 57 9339839 9339921 TAAGAACAGGAATCCTGTGTC 57 NA Drosophila melanogaster 61 CG5989 FBgn0017429 FBtr0076649 2 1 1 80 3L 8596056 8596076 ATGTCAAAGACATATTCGCCG 59 8595935 8596018 GAAGGTTGACTAGGTTTCTAACG 59 NA Drosophila melanogaster 61 CG42445 FBgn0259916 FBtr0300199 2 1 1 143 3L 8148674 8151871 TGGATGAATAATGCGAAAGCC 59 8148551 8148569 CTCAATGGTCAGCCATTGG 58 NA InUTR Drosophila melanogaster 61 CG13676 FBgn0035844 FBtr0076732 3 1 1 80 3L 8139030 8139115 GTAGCAAGTCGGACAATGG 58 8138968 8138986 TGGGATCCCAGATGTAGTC 57 NA Drosophila melanogaster 61 CG8492 FBgn0035813 FBtr0076813 2 1 1 82 3L 7722387 7722405 AGCCCATCTAAGTCCACTC 58 7721841 7722342 TTGGACGAGTAGTTGGACTC 59 NA Drosophila melanogaster 61 mthl6 FBgn0035789 FBtr0076789 3 1 1 80 3L 7480008 7480029 GTTTGTGCAGTACCTTATCTGG 59 7480067 7480142 TAGTTAGTGTAACCTGCTAGGG 58 NA Drosophila melanogaster 61 CG15829 FBgn0035743 FBtr0076913 1 1 1 80 3L 7122048 7122140 CAACATGCCCACCTTTGAG 59 7122184 7122202 AACTCGAGGAACTCCTCCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32397 FBgn0052397 FBtr0076985 3 1 1 81 3L 6558068 6558504 ATTACGTCAGCAATGACGTG 59 6558006 6558024 TTGTCCAGCACTCTTCCTC 59 NA Drosophila melanogaster 61 CG32398 FBgn0052398 FBtr0076988 1 1 1 65 3L 6362005 6362023 CATAGAAATGCCGACCTGG 58 6361958 6361976 ATAGATTGGGAGCCGAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 1 1 1 67 3L 6156737 6156755 TTGGTTCTCCTTATGGGCA 58 6156784 6156932 CACATGTAGCGACTATTTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Jon65Ai FBgn0035667 FBtr0077067 1 1 1 60 3L 6047394 6047412 AGGTAGGATCACCATGGGA 59 6047352 6047370 CAAACCGACAATGTAGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 2 1 1 61 3L 5898734 5898833 TTTGGTGCTCGAGTATGTG 57 5898691 5898709 AGGCCAGTGATAGATTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 mad2 FBgn0035640 FBtr0077113 1 1 1 80 3L 5805956 5806057 ATTGTGGAATACCTGAAGTACG 58 5805897 5805916 CGTGTTGTTAAAGTCTTCGG 57 NA Drosophila melanogaster 61 CG13711 FBgn0035572 FBtr0073347 3 1 1 60 3L 4758172 4758193 GCAACTTTCTCAGAAGAATGTG 58 4758213 4758232 GGTGATAAAGTACTTGGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13712 FBgn0035570 FBtr0073364 3 1 1 76 3L 4709585 4709605 GGAACGGGAATATAGGGACAG 59 4709529 4709547 ACTTTCGCTTGCGTTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32252 FBgn0052252 FBtr0073251 1 1 1 96 3L 4222349 4222419 AGAAGAAGTCTGCTCATGGT 58 4222272 4222290 AATACGTTTCTGGCAGGGT 59 NA Nonspecific Drosophila melanogaster 61 CG1295 FBgn0035509 FBtr0073222 2 1 1 109 3L 4204700 4204718 CAATCGAGTGCTTCCTGTG 58 4204791 4205235 GAGGCTTCACTCTGTTGGA 59 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 2 3 4 108 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833660 3836030 TAAATGGAACCACTGCTGGA 59 NA Drosophila melanogaster 61 CG32263 FBgn0052263 FBtr0073183 1 1 1 60 3L 3810738 3810757 TTTGACTACTCTCGCTCAGG 59 3810697 3810715 GCTGAATCGGACCAATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12029 FBgn0035454 FBtr0113134 2 1 1 105 3L 3646481 3646500 AGTACGCATCTCAATTGGTC 58 3646568 3646752 TTGGTGTGGAAGGACTGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG16753 FBgn0035393 FBtr0072990 3 1 1 60 3L 3055354 3055372 CGTAAGAAACGCAAGGAGG 59 3055394 3055414 TTAGATCTCCGACAACTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2083 FBgn0035376 FBtr0289987 1 1 1 86 3L 2792160 2792241 GGGTCACAGATGCATAGCT 59 2792092 2792110 TTGTAAGCGTTATCCGCCT 59 NA Drosophila melanogaster 61 CG13801 FBgn0035332 FBtr0072888 3 1 1 60 3L 2362524 2362544 CTACAAGATCACCTTCAGGTC 57 2362563 2362584 AACGGTGAATAGCATGATTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DmsR-1 FBgn0035331 FBtr0072887 1 1 1 91 3L 2343668 2343687 CACTGAATTTCCACAAGGGA 58 2343740 2343860 TCAGGTCACTCAGTCTTAGG 58 NA Drosophila melanogaster 61 CG42234 FBgn0250756 FBtr0290136 1 1 1 80 3L 1921861 1921881 CAAGCCCATTCTCAAGTTCAG 59 1921920 1924282 TGCATGAACTCATTTCTGACAC 59 NA Drosophila melanogaster 61 RpL23A FBgn0026372 FBtr0072805 1 1 1 155 3L 1667723 1667814 AAGAAGATCATCAAGGGCG 57 1667586 1667604 GATGATGTTGTACGCGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Klp61F FBgn0004378 FBtr0072733 1 1 1 80 3L 1242323 1242406 GCCACTATAGATGAGTGCAG 58 1242262 1242282 TATGGTTTCAGTTTCGGACAG 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 1 6 6 80 3L 982096 982187 CCATAATGGTTGTTATGACGC 57 982229 982247 CCAGACCATAGAGATGCAG 57 NA Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 3 2 2 143 3L 326149 326167 CAATCCACGAACGGAAACG 59 325966 326045 GCGTATATTCTTGTTCTTGGCA 59 NA Drosophila melanogaster 61 CG13877 FBgn0035112 FBtr0300710 2 1 1 79 3L 218188 218291 CATATGCACAGCTCTTGTGG 59 218333 218351 GAGACTTAGGATGCGACCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13405 FBgn0035097 FBtr0072541 2 1 1 60 3L 74862 74881 ACAACTTAGGGTCTGTCAGG 59 74821 74839 GGCTCTATTCACGAGAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33424 FBgn0053424 FBtr0086416 1 1 1 60 2R 15627535 15627553 ATACATCGGTTCTCGTCCG 59 15627493 15627511 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mov34 FBgn0002787 FBtr0072290 1 1 1 142 2R 20290866 20290884 GATGTGTCCAACAGCTTCG 59 20291057 20291075 TGATACCATCCCACAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3363 FBgn0034987 FBtr0072260 1 1 1 129 2R 20078140 20078158 AGGACACGGATAAGTCAGG 58 20078251 20078329 GGTTTGTTAGCATCTGCCT 58 NA Drosophila melanogaster 61 Fmo-1 FBgn0034943 FBtr0072150 3 1 1 81 2R 19850762 19850839 GAACCTACGAACCAACCTG 58 19850884 19850902 TCTCACATAGGAAGCCTCG 58 NA Drosophila melanogaster 61 CG18128 FBgn0034898 FBtr0072094 3 1 1 60 2R 19606525 19606543 TTTGTGGTTATCAGCAGGG 57 19606483 19606501 CCTTGTCCTTATCGCTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 levy FBgn0034877 FBtr0072061 3 1 1 222 2R 19435824 19435842 TCTAAACCACGCAATTCGC 59 19436179 19436197 CAGGTAGTCGTACTTGACG 57 NA DesignNoJunction Drosophila melanogaster 61 levy FBgn0034877 FBtr0072061 1 1 1 115 2R 19435814 19435833 TGTCCGCTATTCTAAACCAC 57 19436062 19436080 CTTCCACACCTTGTAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Or59a FBgn0026384 FBtr0072023 1 1 1 96 2R 19327792 19327871 ATTCTAGAACTATTCCGACGCA 59 19327717 19327735 CTGCTAAACCGATGCACAC 59 NA Drosophila melanogaster 61 twi FBgn0003900 FBtr0100130,FBtr0071953 3 2 2 215 2R 18935221 18935363 GCCACAAGATACATTGACTTCC 59 18935539 18935557 CCCGAACAGATAACTCAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3649 FBgn0034785 FBtr0071896 3 1 1 90 2R 18735021 18735039 TGTTTGGGATGAGCAACAC 58 18735093 18735161 GATCGATCCGACTCTTTGG 57 NA Drosophila melanogaster 61 CG30265 FBgn0050265 FBtr0071891 3 1 1 81 2R 18720517 18720535 GACTGAATGTGGGAGTAGC 57 18720578 18720659 AGAGTCCAATCGTATTCTGGA 58 NA Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300125 1 1 2 178 2R 18671894 18671980 GAACGCTGAAATAGTAGCCAG 59 18672120 18672138 CATGCATCATGTGCAGGTC 59 NA InUTR Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859,FBtr0071858 2 2 2 94 2R 18515374 18515392 ACAGTACTCCCTCGTTGTG 59 18515450 18515532 TGTTCTTGGGCAGATCCAG 59 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0071838,FBtr0112820 1 3 3 78 2R 18428465 18430835 GGCATCTCATAAACCGGAG 58 18428405 18428423 GAAAGTGGTTCTTTCGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4752 FBgn0034733 FBtr0071832 1 1 1 80 2R 18366315 18366335 TATACAAGTCCGTAGTCGAGG 58 18366377 18366451 CTTTCCAGCTGTGGTTGAG 58 NA Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112520 1 1 2 127 2R 18218159 18218180 CAGAAATAGGATAGGAAAGGCC 58 18218268 18219689 TTGTAGTTCAAAGCAGCCC 58 NA InUTR Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0300693 2 1 2 94 2R 17982091 17982111 CGTTCAGTTTGAGATACCCAC 59 17980211 17982035 TCGGCGTGTTATCAATGTG 58 NA Drosophila melanogaster 61 CG34040 FBgn0054040 FBtr0100095 1 1 1 80 2R 17720596 17720685 TGCAACAATACAGAGGACG 57 17720534 17720553 GCCAGATCTAGCAATAGGAC 57 NA Drosophila melanogaster 61 PTP-ER FBgn0016641 FBtr0071686 3 1 1 172 2R 17508770 17508846 ATTACATCAAGGGACCCGAC 59 17508617 17508635 GATTTGCTCCCTGTCAACG 59 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0089602 3 1 3 175 2R 17099824 17099843 GTGAAGACCGTTTACGATCC 58 17099981 17100066 GTGATGGTCACTTCCTCCT 58 NA Drosophila melanogaster 61 tud FBgn0003891 FBtr0071582 3 1 1 80 2R 17075371 17075390 TTTGTAAACGGAGCATCCCT 59 17075433 17075543 GTTAACGCGAATCTCAGGC 59 NA Drosophila melanogaster 61 Cht4 FBgn0022700 FBtr0071543 3 1 1 89 2R 16953856 16953933 AGATTAAGGAGACCTACGATCAG 59 16953789 16953809 GAATGTCGTATGAGATGCTGG 59 NA Drosophila melanogaster 61 maf-S FBgn0034534 FBtr0086230 2 1 1 86 2R 16528609 16528689 AGAAAGTCATCCCTGGCAC 59 16528737 16528757 AAGATCCCTTACCGAAATGCT 59 NA Drosophila melanogaster 61 l(2)05510 FBgn0028622 FBtr0086258 2 1 1 81 2R 16451353 16451371 TCAGCGAACAAGGTCTACG 59 16451217 16451310 GGACCTCATTCTTGTTGACAC 59 NA Drosophila melanogaster 61 Obp56e FBgn0034471 FBtr0086327 1 1 1 97 2R 15599930 15599948 TTGCAGCTCTATCTTTGGC 58 15600065 15600083 GATTCCCTCCTGTTTGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15128 FBgn0034467 FBtr0086481 2 1 1 82 2R 15574197 15574217 GACACATCGTAACATGAACCA 58 15574048 15574153 CGAATTTCGCCAATTGCTG 58 NA Drosophila melanogaster 61 CG11018 FBgn0034464 FBtr0086472 3 1 1 72 2R 15550054 15550073 TGGTATGCAATCCTCCAAGG 59 15550161 15550179 CAACGACTCCTTGTACCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG11018 FBgn0034464 FBtr0086472 2 1 1 71 2R 15550055 15550074 GGTATGCAATCCTCCAAGGA 59 15550161 15550179 CAACGACTCCTTGTACCCA 59 NA DesignNoJunction Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0100392,FBtr0086451,FBtr0086457,FBtr0086454 2 18 19 88 2R 15358251 15358272 GGTCGCCATCAAGATAATTGAC 59 15358315 15358398 CCAGCATCTTCATTATTCTAACCTC 59 NA Drosophila melanogaster 61 Vha100-3 FBgn0028669 FBtr0086602 3 1 1 60 2R 14798419 14798438 TTAACATCTACGACTGCCCT 58 14798378 14798398 CTCAGCTCCTTAACCTTATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 1 2 2 80 2R 14660395 14660473 CTATGTCCAGAGCTGTTTCG 58 14660516 14660534 TAGACACAGGCGACTATCC 58 NA Drosophila melanogaster 61 CG18604 FBgn0034378 FBtr0086606 2 1 1 86 2R 14590175 14590286 GATCAGTTTGCCAGGTTCG 59 14590336 14590354 GGAACTTCGATGTCATGGC 59 NA Drosophila melanogaster 61 CG15071 FBgn0034377 FBtr0086605 2 1 1 60 2R 14584405 14584424 GGAAACTGGTCGAAATCCAC 59 14584444 14584465 GATCAGACCTATTAGATCTGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 2 2 2 158 2R 14329808 14331168 ACGTGTTGATTTCTCATGGC 59 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 CG18538 FBgn0034324 FBtr0086760 2 1 1 111 2R 14184845 14184918 AAACCATGGTACGTCGAGG 59 14184990 14185011 TGTTCAGATGTTCGTATAGCGA 59 NA Drosophila melanogaster 61 sub FBgn0003545 FBtr0086881 3 1 1 117 2R 13635030 13635051 CAGCGAGACATCTATGATACCT 59 13634873 13634952 CATCATCGCCCAGTAAGGT 59 NA Drosophila melanogaster 61 CG34195 FBgn0085224 FBtr0112388 2 1 1 76 2R 13620923 13620943 GTGGAAAGATTTACCCATTGG 57 13621043 13621061 ATAACGTCCGGTTCTAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0113090 1 1 2 105 2R 13435947 13435966 CTACCTAAGCAGGGTACAGC 59 13436034 13436403 GTTCTTTACGCAGCTGCTC 59 NA InUTR Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 3 2 2 107 2R 13394247 13394963 ATAGACGTCCCATCACCTC 58 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 2 2 2 80 2R 13378859 13378937 CCGGATGCTATATCCTTGGG 59 13378980 13378998 AAAGGTGACCTCGTTGAGG 59 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086922 3 1 2 84 2R 13348125 13348143 AGTTTCGATCGGAAAGCGA 59 13349518 13349536 GGCTCTTAGGTATTCCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 2 1 1 185 2R 12894007 12894307 TTTAAGTTCGTGGAAGGCAC 58 12894455 12894473 GTTGAATGTCGCCGATACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9013 FBgn0034169 FBtr0087070 1 1 1 60 2R 12835555 12835574 CTTCTGTGGGAATCTCTTCG 58 12835514 12835533 ACAATCGCCTTCATGATCAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp53D FBgn0259967 FBtr0300312 3 1 1 69 2R 12632223 12632243 CCAAACGTTAGATGGTTTGGA 58 12632174 12632192 CACTTCATTCGGCTGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Amyrel FBgn0020506 FBtr0087117 2 1 1 83 2R 12539604 12539622 ATCACCTCATCGAACTGGG 59 12539483 12539562 TGTAGATGTACTCTAGATCTTCCG 58 NA Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0087092,FBtr0113086 2 2 2 60 2R 12423832 12423850 CGATCCGCTACTCTATGCC 59 12423872 12423892 AGTTCCGATATCGATGACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30100 FBgn0050100 FBtr0087140 3 1 1 123 2R 12179210 12179283 AATTCAGCTTTAAGCGCGG 59 12179370 12179388 GTCCAGATTGGACTTGCAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG30099 FBgn0050099 FBtr0087180 2 1 1 60 2R 12176356 12176376 CACCTACGTTCGAAAGTTCAC 59 12176316 12176335 GGATGGCATGCTGATATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 3 2 2 118 2R 11997163 11997184 TCTGCGGGTCTATAAGATTGTC 59 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 CG8207 FBgn0034035 FBtr0087342 2 1 1 80 2R 11566007 11566092 AACATCAGGTACCTTCAGGAG 59 11565947 11565966 ACCAGCTCTAATCTGATCCC 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 2 7 7 125 2R 11550672 11550751 GTTATCAATGCACAGGGCC 59 11550565 11550584 GTACCGATACTTCTTGCCGA 59 NA Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393,FBtr0087394 3 2 2 60 2R 11184878 11184897 ACTTTACTGTCTCAGCGGTC 59 11184837 11184857 TATGGACATCTCTTCCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a8 FBgn0013772 FBtr0087455 1 1 1 100 2R 10775311 10775391 TTTAGATGAAACTCTGCGACTG 58 10775232 10775250 CCTCGATGACGAAGTTTGG 58 NA Drosophila melanogaster 61 CG12857 FBgn0033963 FBtr0087469 1 1 1 80 2R 10646917 10646995 TTTACCAATCCCAAGCTTAGTG 58 10646858 10646876 CGCCTTCGATACGAATCTC 58 NA Drosophila melanogaster 61 AttA FBgn0012042 FBtr0087437 1 1 1 126 2R 10635041 10635059 GTTTGGATCTGACCAAGGG 58 10635149 10635231 TGACCAGCATTGTTGTAGG 57 NA Drosophila melanogaster 61 CG30069 FBgn0050069 FBtr0087530 3 1 1 87 2R 10075544 10075622 CAAACTGAAGATAACGTTGACG 58 10075669 10075688 TTTGCTTGGGAATGTTTCCA 58 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 3 4 4 144 2R 9717363 9718066 CATACAAGTGACCACTGCC 58 9718171 9718192 CTTGTATTTGTCCTTCAGATGC 57 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 3 2 2 96 2R 8825966 8826076 GGATCGGTTTCACAAAGCC 59 8826135 8826154 CGTCATGGAATCACTGTCCT 59 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 3 6 6 80 2R 8765629 8765648 TCTTGGGTCTGTTTACAGCA 59 8765510 8765587 CCATGAGAACCTCTTTCGGA 59 NA Drosophila melanogaster 61 CG8818 FBgn0033751 FBtr0087941 3 1 1 209 2R 8405274 8405354 TAGTGGAGAGGAGAGCCAG 59 8405031 8405051 GCATCTCTAATTCACTGCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942,FBtr0087943 2 2 2 60 2R 8400033 8400051 CAGAATACCGCCATCTGGA 59 8399925 8400011 TCAACTGTTGATTCACGTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0113358 3 1 2 188 2R 8383680 8383698 GCAATGTGAATCTGCTGCT 59 8385928 8387472 AAGTCTCGTAGCACTGCTC 59 NA Drosophila melanogaster 61 Cpr49Ab FBgn0050042 FBtr0087914 2 1 1 103 2R 8266447 8266465 AATCTTCCCAAGGGACGTG 59 8266528 8266602 GTTTCCCAAAGATAGTGATAGCC 59 NA Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 2 1 1 98 2R 8264214 8264294 ACTGCTCTTCATAGCAGCC 59 8264353 8264374 TCCTGTCTGATAATTGGAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13163 FBgn0033712 FBtr0087896 2 1 1 106 2R 8209148 8209230 ATGTTCAAACTAGTCACAGCTG 59 8209296 8209315 ATGGTAAGGGATTTCTCCGT 58 NA Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 1 2 2 90 2R 7943884 7949026 CCTTCAAGATCAAGGACATCAC 59 7949077 7949095 AATTTCAGCGACACCTTCG 58 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299855 1 1 4 60 2R 7182312 7182330 CGTCACCTTACTAACCGTC 57 7182270 7182288 ACAGCTTGTAGCCAAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18336 FBgn0040763 FBtr0088175 3 1 1 177 2R 7181686 7181765 CTATTCCAGCCGATTTGGT 57 7181527 7181545 TGGAATCATGCCTACCACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13215 FBgn0033592 FBtr0088192 2 1 1 60 2R 7127394 7127413 GGATATTACCGGAGAGCCAG 59 7127353 7127371 GTCGCCCTGGTAGTAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Git FBgn0033539 FBtr0088258 1 1 1 145 2R 6531334 6531354 CATGGACCTATACGATGAGGT 58 6531084 6531164 CCAATTTCTGACGACCCTG 58 NA Drosophila melanogaster 61 CG12898 FBgn0033516 FBtr0088321 2 1 1 60 2R 6294912 6294933 CAACATCGAGTTCATTCTGGAG 59 6294873 6294893 ATACTCAACGTAATCGTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jra FBgn0001291 FBtr0088411,FBtr0088410 2 2 2 73 2R 5984631 5984753 TTCCCACCCACTGATTGAC 59 5984790 5984808 TACTTAAGTTCGCAGCAGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34220 FBgn0085249 FBtr0112413 1 1 1 85 2R 5930865 5930939 CGATGAATCTGTCAAGCCT 57 5930798 5930816 GGGCCTGTTTATTCTGTGG 58 NA InUTR Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 1 2 2 147 2R 5752729 5752809 ATGCTAACTCCTTGCAGTG 57 5752546 5752564 TGAATCACATCCTGCTGGA 58 NA Nonspecific Drosophila melanogaster 61 CG12158 FBgn0040775 FBtr0088557 1 1 1 156 2R 5250344 5250362 TCTAATTCTGGCTGTGGGT 58 5250152 5250170 GTTCTAGTTGTTCTGCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 1 4 4 105 2R 4645019 4645095 CCAAGGAGCTCAATGTATCC 58 4645163 4645181 AAGAAGCGCAGATTCTTGG 58 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088812 3 1 4 124 2R 4035890 4043928 AAGCACGAGAATCAGTAACAG 58 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088865 1 1 2 86 2R 3919672 3919690 CAACATGCACGAGATCCTC 58 3919739 3920818 TAAAGTTCCCTGAAGTTGCC 58 NA Drosophila melanogaster 61 CG2906 FBgn0033240 FBtr0113052 3 1 1 80 2R 3845150 3845169 CATCAGTTTCCAGAGCTTCG 59 3845209 3845283 CTGGAAATATTGGTGAAACGTC 58 NA Drosophila melanogaster 61 CG8791 FBgn0033234 FBtr0088849 1 1 1 83 2R 3816245 3816263 TTACAGCCAGCAGGATCAG 59 3816310 3816390 CAGGCATAGACTGACTGGA 58 NA Drosophila melanogaster 61 CG30493 FBgn0050493 FBtr0088925 1 1 1 80 2R 3590323 3590342 ATGCTATCCCAAACAGAGGG 59 3590385 3590460 GAGAATATTACGCGCCGTG 59 NA Drosophila melanogaster 61 p47 FBgn0033179 FBtr0088997 2 1 1 95 2R 3352767 3352846 TTCATACAAACTGCACGCC 59 3352690 3352708 GATGGTGGAATTGTCGTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11127 FBgn0033178 FBtr0088975 1 1 1 60 2R 3351150 3351169 TCCTGCTGATGTACAAGACC 59 3351191 3351210 AAGTTGACGTACTTGAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11113 FBgn0033165 FBtr0113048 2 1 1 121 2R 3289390 3289462 ACACATTGCCATTCTCTACC 58 3289546 3289564 TGTCAATCGTGTCCGAGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1707 FBgn0033162 FBtr0089013 1 1 1 177 2R 3283223 3283309 GTCCACCAAGGACTTCCTC 59 3282992 3283010 ATCCTTAGGCACATCGGTG 59 NA Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 2 2 2 80 2R 3279534 3279654 GGATACGGAGCTCAATGTG 58 3279472 3279490 GCAATGTTAACCTGCAAGC 58 NA Drosophila melanogaster 61 Or43a FBgn0026389 FBtr0089051 3 1 1 80 2R 3121186 3121354 GTCTGAATATTATAACCTCACCCAC 59 3121130 3121149 AGGTGAAGAGAACGTACAGC 59 NA Drosophila melanogaster 61 phtf FBgn0028579 FBtr0086125 2 1 1 80 2R 2632683 2632762 TGAGGTCGTATTTGAAGAAACG 59 2632801 2632821 ACAGGAGGGTTACTATGAAGG 58 NA Drosophila melanogaster 61 dpr12 FBgn0085414 FBtr0300553 2 1 1 80 2R 1746002 1746022 CTGACGCACATATTTAGGTCG 59 1746059 1746147 TTAGGTCAGGAAGATATGTCTCAC 59 NA Drosophila melanogaster 61 CG34200 FBgn0085229 FBtr0112393 2 1 1 114 2R 1645321 1645424 AGTTTCAATGGATGCTGGT 57 1645502 1645520 TAGTACTCTTAGGCTGGCC 57 NA InUTR Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 2 3 3 103 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980106 980127 ACTCCTTTGATTACAAGCTTCG 59 NA Drosophila melanogaster 61 His-Psi:CR33867 FBgn0053867 FBtr0091871 2 1 1 111 2L 21541021 21541042 CGAACATATCGTTCGTACTCTC 58 21539458 21540950 TATTATACACGCACAGCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 3 2 2 80 2L 21660048 21660127 CTGCACCAATTGTACATCTACC 59 21660166 21660186 ATTACCGTAGAACGATTCCGT 59 NA Drosophila melanogaster 61 Mpp6 FBgn0032921 FBtr0081469 1 1 1 61 2L 21157382 21157400 CAAATCGGCGGAGATAGTG 58 21157423 21157443 CGTGGTTTCTTAAAGTACTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34136 FBgn0083972 FBtr0110944 1 1 1 80 2L 21097264 21098588 CCAATTGTGAATGAGCACCA 59 21098627 21098649 CAGGACATCATGCTTAAAGTAGC 60 NA Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463,FBtr0081462 1 2 2 80 2L 21079111 21079300 GTGCATTATAGATCTCAGGAGG 58 21079341 21079359 AACCAACTTATGGAAGCCG 58 NA Drosophila melanogaster 61 CG9336 FBgn0032897 FBtr0081427 3 1 1 100 2L 20859305 20859323 GGCCGTTATGATCAGTCTG 58 20859778 20859796 CATCAGCCTCGAACTTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31673 FBgn0051673 FBtr0081422 2 1 1 83 2L 20830065 20830290 AATCGAGAGGTCCCAATGG 59 20830337 20830355 CCAAAGAAACCGATGACGG 59 NA Drosophila melanogaster 61 CG31688 FBgn0051688 FBtr0273379,FBtr0273378 2 2 2 80 2L 20432660 20432678 GTCACCGAGGAGATACTCC 58 20432720 20441067 GGTGTGAAGAATTTGCATGTG 58 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 3 2 2 272 2L 20349195 20349213 GAATACGCCCAGAAGAACG 58 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 2 2 2 120 2L 20060344 20060421 CAACTTCAAGATGGCTGGT 58 20060242 20060260 CGTAAGAGTTCGTGCACTC 58 NA Drosophila melanogaster 61 CG10680 FBgn0032836 FBtr0081303 1 1 1 80 2L 19964944 19964962 AGGCATTCGACCAATTCCT 59 19965006 19965076 GATGGCATAGGTACCGGTC 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301718,FBtr0301719 1 3 4 80 2L 19926504 19928635 TAGCATAAGATCGACGAAATCC 58 19928676 19928694 TAGTAGGGCTCGATTTCCA 57 NA Drosophila melanogaster 61 CG33116 FBgn0053116 FBtr0081249 2 1 1 83 2L 19533812 19533830 AGGCAACTATTCAGACGCT 59 19533875 19534158 GGCACTGTACTTGTAGTTGTC 59 NA Drosophila melanogaster 61 CG13084 FBgn0032788 FBtr0081240 2 1 1 63 2L 19485869 19485887 GTGGAGCATCAAGGAGGAG 59 19485973 19485991 ATAGGCGGTAGCTTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 RanGap FBgn0003346 FBtr0081234 3 1 1 113 2L 19445928 19445950 CAAGCATAATCCTCATCTACGAG 59 19446023 19446111 CTCATTTCACGCAGCAGTG 59 NA Drosophila melanogaster 61 CG17572 FBgn0032753 FBtr0081173 2 1 1 81 2L 19073670 19073959 AGAATTCGAGAAACTCCTGGT 59 19073609 19073627 TCCAGTAGTCTCGTTGCTC 58 NA Drosophila melanogaster 61 Rpn3 FBgn0261396 FBtr0302289 2 1 1 95 2L 19052196 19052214 GGGTAGCCTCGAAAGAGTC 59 19052334 19052352 CAAGATTCCGGAAGACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15168 FBgn0032732 FBtr0081135 1 1 1 112 2L 18987820 18987838 TAATTGCCGGATTTGCCAG 58 18987976 18988065 CAGGATAATGTCCAATGGAAGG 59 NA Drosophila melanogaster 61 CG10641 FBgn0032731 FBtr0081185 2 1 1 86 2L 18986728 18986746 AGTGGTCAACGTCTACACC 59 18978758 18986681 GCCGTATCGTATGTATTGAAGG 59 NA Drosophila melanogaster 61 CG10428 FBgn0032724 FBtr0081132 3 1 1 121 2L 18949785 18949803 TCAGTTTCACAATTGCGGA 58 18949888 18949958 GAAAGAGTCGATCTCGCTG 58 NA Drosophila melanogaster 61 CG33120 FBgn0053120 FBtr0081118 1 1 1 80 2L 18844465 18844485 TGCAGCTATAATTCGGATTGC 59 18844336 18844424 CTTCCTGCCAGAAACTTTCC 59 NA InUTR Drosophila melanogaster 61 CG10570 FBgn0040992 FBtr0081122 3 1 1 223 2L 18810667 18810820 AGATTGGGCAAACATCTGTC 58 18810463 18810481 GTACGTTCGGTGTAGACCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 3 2 2 84 2L 18679153 18682279 GGAGGATAGTAATGTTAAGAACCC 58 18682322 18682340 AGAGTCCAGTGAGTTGAGG 58 NA Drosophila melanogaster 61 CG42659 FBgn0261531 FBtr0302514 2 1 1 80 2L 18007485 18007558 CCATTTCCGACTTCTTTCGA 58 18007598 18007619 CAATGTAGAAAGGGTTTATGGC 57 NA Drosophila melanogaster 61 CG5681 FBgn0032658 FBtr0081024 3 1 1 116 2L 17986411 17986432 TGCTCAGTCAAGATTTATAGCC 58 17986562 17986580 TTATCTGCAGTGCTAGCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4841 FBgn0032622 FBtr0080950 3 1 1 80 2L 16911633 16911714 ACACTACGACCTTTGGCTC 59 16911758 16911776 TAATCGTGTTCTCCAGCGT 59 NA Drosophila melanogaster 61 CG6115 FBgn0040985 FBtr0080959 1 1 1 83 2L 16887665 16887800 ACAAGCACTTGCAGTATTTGG 59 16887602 16887620 TGAAGGCATCGTGGATCTG 59 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 1 4 4 84 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825418 AATTATTTCCATGGCTAGACCC 58 NA Drosophila melanogaster 61 CG5888 FBgn0028523 FBtr0080880 3 1 1 162 2L 16404619 16404637 CTACTGCAAGCGAGATGAG 58 16400516 16404494 CTCAACGGGATATTCCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823,FBtr0080822 3 2 2 82 2L 16238090 16238166 AAAGATGATCTGAACTGTGGTC 58 16238209 16238227 AAGATGAGCAGGTTCACCA 59 NA Drosophila melanogaster 61 CG4892 FBgn0028884 FBtr0080816 3 1 1 60 2L 16134193 16134211 GTTCCATCCAAGATGTCCG 58 16134232 16134253 GGAAATACTCGTCACTGTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31824 FBgn0051824 FBtr0080789 3 1 1 103 2L 15886711 15886729 GCTGTCAACTGATGCAACC 59 15886793 15887914 TTGCTTGTATCTTTCCCAAGTG 59 NA Drosophila melanogaster 61 CG3793 FBgn0028507 FBtr0080761 1 1 1 131 2L 15765088 15765106 CCTGCCCACCATATTTCTC 58 15765201 15765283 TTCATGTTGACCTGTTCGT 57 NA Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080771 3 1 2 87 2L 15749844 15750560 ACAACCAGAATGACTGGAC 57 15749775 15749793 TTGGGATAGCCCTCATCTC 58 NA Drosophila melanogaster 61 nimC4 FBgn0260011 FBtr0080592 2 1 1 60 2L 14048578 14048596 TGACGATGAGCTGAATCCC 59 14048620 14048638 AAACAGGAATCCACAGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080588 1 1 2 98 2L 13980264 13980623 AAACAAGCTCACGAGTGTG 58 13980682 13980703 ACTTACATAACCCTTTCCACAC 58 NA Drosophila melanogaster 61 CG7916 FBgn0028534 FBtr0080549 2 1 1 104 2L 13847071 13847090 CCTACACCAATGCTGATCTC 58 13847212 13847230 TGATCTCCATGCCTTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Orc5 FBgn0015271 FBtr0080543 1 1 1 101 2L 13831070 13831088 GATTGTTCGTCAAGCACCA 59 13831206 13831224 ATTTGGGTCCCAAAGTGGT 60 NA DesignNoJunction Drosophila melanogaster 61 CG7110 FBgn0032521 FBtr0080500 1 1 1 80 2L 13403340 13403479 CTTTCTCAAGCACCAGATGC 59 13403521 13403540 GTTGGTTGTGTTGTCTTCCT 58 NA Drosophila melanogaster 61 CG16815 FBgn0032491 FBtr0273448 3 1 1 60 2L 13230286 13230304 GTATCGGAGTCATCATGCC 57 13230327 13230346 GCGGTAGTATAGACTGAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16800 FBgn0032462 FBtr0273445 3 1 1 254 2L 12966897 12967107 AGGAGCAGGAAGAAGATCAG 58 12967324 12967342 TGTGATGAGACTCCGAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 2 1 2 146 2L 12678863 12678881 ACACAAACACAGCAATCGG 59 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31862 FBgn0051862 FBtr0080350 3 1 1 60 2L 12338896 12338915 TTTGGTATTATCCCAGGGCA 58 12338936 12338956 CTTCTCTAGTGGATCCAAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0080338,FBtr0301019 3 2 2 83 2L 12163032 12163466 GGCCATTCAGAATATCCCTG 58 12163512 12163530 GATGCCGAAAGAGATAGCC 58 NA Drosophila melanogaster 61 CG31864 FBgn0051864 FBtr0080288 3 1 1 80 2L 11995875 11995894 TAGCCAATGTGGTTAGACAC 57 11995937 11996013 TCTCCCGGAATTCTTTGGA 58 NA Nonspecific Drosophila melanogaster 61 CG34163 FBgn0085192 FBtr0112354 3 1 1 101 2L 11988299 11988321 GGAGATCTCCACATAAACAATGG 59 11988436 11988454 TTCAGTTTGAGCGAAACGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 3 1 1 66 2L 11695189 11695294 CTGACTAGGAACGTTGAGGG 59 11695323 11695341 AAATGACGCTGTCGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4983 FBgn0032371 FBtr0080253 1 1 1 81 2L 11652561 11652639 CCGAATCAGGAAATTGCCA 58 11652682 11652702 CACATTGAATGGATTGAAGGG 57 NA InUTR Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239,FBtr0080240 1 2 2 84 2L 11518877 11518895 GAAGATCGAGAGGCTGGAG 59 11518943 11519018 TTCCGTTACAAAGCGAAGG 58 NA Nonspecific Drosophila melanogaster 61 spz4 FBgn0032362 FBtr0080238 2 1 1 91 2L 11507377 11507454 CGTGGAGTAAATGCCTGTC 58 11507508 11507527 AGATTGAGGAGGGCTAAGAC 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115,FBtr0300114,FBtr0300537 2 4 4 127 2L 11165835 11165856 GCACATCAAAGAGAAGTACGAC 59 11165663 11165747 AGGGTCTGGTTTGGTTCTG 59 NA Drosophila melanogaster 61 CG14915 FBgn0032335 FBtr0080193 2 1 1 60 2L 11071195 11071216 CGAAATCATGGACCAGATATCG 59 11071235 11071255 CTTCACGAAATAATCCCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lip1 FBgn0023496 FBtr0080124 3 1 1 103 2L 10700371 10700389 CAAGGTCGTTTCCATGCAG 59 10700218 10700309 CTACCAGGCTATTAAAGTACAGAC 58 NA Drosophila melanogaster 61 w-cup FBgn0032269 FBtr0080132 3 1 1 134 2L 10576863 10576881 CAAGAAGACAATTCGCGAC 57 10576687 10576771 CTGTGACTAGTAGATGTAGATAAGG 57 NA Drosophila melanogaster 61 Lip4 FBgn0032264 FBtr0080093 2 1 1 81 2L 10529736 10530086 CACACTTGAATACCTACAGTCTG 59 10530125 10530145 ATGTATCCATCATCCGTCTCC 59 NA Drosophila melanogaster 61 CG17768 FBgn0032240 FBtr0100253 1 1 1 80 2L 10403552 10403745 TATTTGCACCTCAAAGGATGG 58 10403492 10403511 CGCAGATATTTGATGGTGCT 58 NA Nonspecific Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 2 3 3 80 2L 10275617 10275705 CTCAATCGGCGTCTTATATCAG 58 10275558 10275576 TTATCCAGTTGCACAGCAC 58 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079949 3 1 2 167 2L 10222693 10223150 ATCAATGCCGACAAGATGAC 59 10223280 10223298 CAGGGTAATCATGCAGTGC 59 NA InUTR Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 2 1 1 127 2L 10201418 10201436 GTACATCAAGGCGGAACAG 58 10201527 10201615 GAGCCACCTTGTTGATACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13135 FBgn0032184 FBtr0079966 2 1 1 61 2L 10122711 10122729 CACTACTGATCGTTGGCTC 58 10122668 10122686 TAGACCAACTGGCAGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 1 2 2 109 2L 9923290 9923374 GCAGTTGAGGATTCTACCCT 59 9923200 9923218 TAGCTACAAAGATCGCGCA 59 NA Drosophila melanogaster 61 CG33299 FBgn0053299 FBtr0300213 3 1 1 60 2L 9657068 9657087 AAGAAGATACCCTACACCGT 57 9657110 9657128 CGGGATAAGGTTTCTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199,FBtr0079842,FBtr0079841 2 3 3 110 2L 9621644 9621664 TGCGTTTGTTCTCTGAAATCC 59 9621736 9621969 CTACAACCTTGCCTTTGCG 59 NA Drosophila melanogaster 61 CG9582 FBgn0032090 FBtr0079778 3 1 1 60 2L 9024724 9024743 GCGAAAGGTCATCATAGCTG 59 9024683 9024703 CAAAGTAACACTCATCACGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18088 FBgn0032082 FBtr0079759 3 1 1 80 2L 8968364 8968779 AGGATACAATAAGGTTGCCG 57 8968822 8968840 TCCTTAGCCGTACTAGCTG 58 NA Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0113029 1 1 2 82 2L 8958881 8958899 TACTCAATGCCGGATTTGC 58 8955526 8955546 AGTATCACAATCATCAGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13097 FBgn0032051 FBtr0079697 1 1 1 72 2L 8512857 8512875 ACAATCACCAAGAATCGCA 57 8512697 8512715 TTGAGGACTTCAGAGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Peritrophin-15a FBgn0040959 FBtr0079713 1 1 1 92 2L 8396053 8396071 AATTGCACCATGAAGTCCG 58 8395908 8395926 GTCAGAATTGGGATCGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7778 FBgn0032025 FBtr0079606 2 1 1 140 2L 8349603 8349753 AGGTTTCAGTGAATGGCAC 58 8349857 8349875 TACAGGCGTTCATACTGCA 59 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0079620,FBtr0273381,FBtr0079621 1 4 4 88 2L 8252521 8252602 CTTGATAGGCAGCAAAGTTCC 59 8252453 8252471 AGGTGTCATACTTTCCGCC 59 NA Drosophila melanogaster 61 CG8353 FBgn0032002 FBtr0079593 2 1 1 60 2L 8214453 8214473 AAAGAATGAGGAGGTTGTGAC 58 8214678 8214697 TGTCAGAAGTTCTTGAACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8451 FBgn0031998 FBtr0079637 1 1 1 80 2L 8201068 8201086 TCTCCCTTGTGACCAAACC 59 8200950 8201027 TTGGAAGGAATCTGTGAATCAC 58 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079537 3 1 4 88 2L 8030765 8030783 ACATTACGCGTGAATACCA 57 8030834 8032073 TCCTACGCTATATCTTTGCG 57 NA InUTR Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 2 2 2 60 2L 7817640 7817737 CCTGTATAGATTGTCAGGACTC 57 7817755 7817776 TATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6739 FBgn0031926 FBtr0079472 3 1 1 103 2L 7615879 7615899 AAGTGGTAACATCCCTAGGAG 58 7615961 7616131 GGGACAATCAATTTGCTTATCG 58 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 1 4 4 80 2L 7444382 7444469 CATTATCGATATGGAAGGGCTG 58 7444509 7444528 ATGTAATCCAGCAACATGGC 59 NA Drosophila melanogaster 61 CG5958 FBgn0031913 FBtr0079466 1 1 1 134 2L 7431186 7431204 CTCACATTCATCCAGGAGG 57 7430847 7431090 GAAGTGCATCCTATTGTTCAG 57 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 2 4 4 80 2L 7404149 7404233 GAAGATGCCATGAGAGTGC 58 7404274 7404295 ATCCGCATAAGTTTGAATCTGG 59 NA Drosophila melanogaster 61 Wnt10 FBgn0031903 FBtr0079435 3 1 1 83 2L 7369572 7369971 ACAAACTTGGCTCTATGGC 58 7370018 7370036 CAGAGCTCCACTTGATCCT 58 NA Drosophila melanogaster 61 snRNP70K FBgn0016978 FBtr0079355 2 1 1 195 2L 6971496 6971597 CTGTTTAAGACGAGGAACTTCAG 59 6971323 6971341 AAATCGGCCATGAACTTGG 58 NA InUTR Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 1 5 5 80 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961817 6961899 CGTTCATCAACCACATGCT 58 NA Drosophila melanogaster 61 cup FBgn0000392 FBtr0290322 2 1 1 92 2L 6665778 6668346 AAACGGAGTTCCAAGATCC 57 6668402 6668420 AGTCTTCGTCGTTGTAACC 57 NA Drosophila melanogaster 61 osm-6 FBgn0031829 FBtr0079333 2 1 1 86 2L 6556351 6556425 CAATGATGTGGAGCTGAGC 59 6556283 6556301 ATCGAATCGATCAGGCAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9505 FBgn0031805 FBtr0079253 3 1 1 60 2L 6368279 6368297 ATCGATACGCTGATGTCCT 58 6368321 6368339 AGGCATAGAAATCCTCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9498 FBgn0031801 FBtr0079282 1 1 1 137 2L 6350463 6350481 CAGTGACCTCACGGTAGAG 59 6350280 6350362 ATAGCGGGATCCTTCTTGG 59 NA Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111,FBtr0079110 2 2 3 61 2L 5668878 5668957 ATCAGTCAACATGATGCGC 59 5668982 5669000 TGATCTTTGCAGTACGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7742 FBgn0031690 FBtr0079092 3 1 1 92 2L 5213318 5213396 CATGACTACGATATTGAGTACTGG 58 5213249 5213269 CTGAATGTCCTTGAAGACCAG 58 NA Drosophila melanogaster 61 Cyp28d1 FBgn0031689 FBtr0079062 1 1 1 80 2L 5210679 5210754 ATCGATGAGATCTATGAGCAG 57 5210793 5210814 GACCATTAGTTGTGGAATTCTG 58 NA Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 2 2 2 80 2L 4840095 4840174 TTGATTCTAGGTTGGATGGAC 57 4840215 4840234 TAGTTTGGCCAATTCTCCAC 58 NA Drosophila melanogaster 61 CG3244 FBgn0031629 FBtr0077417 2 1 1 160 2L 4799866 4801824 AAGCAAAGATGAAAGTCACCC 59 4797619 4797638 GTAGGAGAACTCCTTGGGAC 59 NA InUTR Drosophila melanogaster 61 CG17840 FBgn0031611 FBtr0077443 3 1 1 139 2L 4466992 4467069 GTTTGACAAAGCAGGGTCC 59 4467172 4467190 ACACGAATAGGGTAGGCAC 59 NA Drosophila melanogaster 61 CG3652 FBgn0031600 FBtr0077460 3 1 1 94 2L 4393423 4393509 ACGAGATTGGGACCTTTGG 59 4393347 4393365 CGTTGTCAGACATGCTGTC 59 NA Drosophila melanogaster 61 Sr-CIII FBgn0020376 FBtr0077466 2 1 1 86 2L 4121122 4121142 GTAAGAAACCTGACGATCTCC 58 4121187 4121268 GAGTTTGGTGCAGATATTTCTG 58 NA Drosophila melanogaster 61 Sfp24Ba FBgn0259951 FBtr0300296 1 1 1 176 2L 3668408 3668479 AATCGAATGCCGATTGTGG 59 3668250 3668268 AACCCTTGCATTTGAGCTC 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 1 10 10 80 2L 3502696 3502715 CGATTATGTCGCCAATGGAC 59 3502547 3502653 TCATGTTGATGAGGCTGCT 59 NA Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 1 1 1 281 2L 3469211 3469229 ATTCTTCACCGGTTCAGCA 59 3468896 3468967 TTCTCAAAGAACTGTCCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34406 FBgn0085435 FBtr0112671 1 1 1 112 2L 3171995 3172065 TTTGGACGGCATAAGTCCT 59 3171901 3171919 TTCAGTCGGAAGGTCATCG 59 NA Drosophila melanogaster 61 CG17258 FBgn0031496 FBtr0300814 1 1 1 80 2L 3032940 3032958 CTTCAAACGACTGCTGGAG 58 3032818 3032898 GAGTTCTTTGTGATCAACCGG 59 NA Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 2 1 1 74 2L 2845448 2845528 AAGTTAGTGATCGGTGCTCC 59 2845393 2845411 AACCTCTTCTACTGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3077 FBgn0031457 FBtr0077736 3 1 1 120 2L 2765344 2765362 GATGAGCTGGACAGTCCAG 59 2765157 2765175 TGGTCGGCTTATACTCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15382 FBgn0031393 FBtr0077832 2 1 1 60 2L 2156106 2156126 CAAATCCGAGACTTCAGTGAG 58 2156147 2156166 AATTGGAGTCCTCGTCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-22C FBgn0259230 FBtr0299675 1 1 1 60 2L 2037131 2037149 TCCTAGTCAATGTGGAGGA 57 2037089 2037108 GGTCAGGTGATTTAACACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077867 3 1 3 60 2L 1987611 1987630 GTTTGTTGATCAGCAACCGA 59 1986091 1987590 GAGAACCATGTTGATTTGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5440 FBgn0031331 FBtr0077923 1 1 1 60 2L 1334546 1334566 TATATCACTGCAACATCCACC 58 1334585 1334606 CATTTCTCCTTCAGGATATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 S6kII FBgn0011285 FBtr0077360 2 1 1 99 X 21934326 21934697 CTCTGCGATTTGGGTTTCG 59 21934760 21934778 TCTTTAGAACCTCGGGAGC 58 NA Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0289961,FBtr0074052 2 2 2 86 X 15570665 15570683 AAGGACCTCAGCAACATCC 59 15570733 15570751 GGGAACAGCAGTTACACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070704 3 1 4 80 X 4582050 4585678 ATCCCTACATCGTTACCAAGG 59 4585718 4585738 GTGTGCTTACAACTTCACTGG 59 NA InUTR Drosophila melanogaster 61 CG18823 FBgn0042146 FBtr0070171 2 1 1 60 X 884620 884639 TAGAAACGATATCCCGGCAC 59 884662 884680 CGGTAGGTTTCTCACCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13367 FBgn0025634 FBtr0070121 1 1 1 136 X 539939 540033 CCTAATCGGACCCGATGAG 59 540133 540151 ATCTCTGGGCAGTGTACTC 58 NA Drosophila melanogaster 61 Acf1 FBgn0027620 FBtr0085845 2 1 1 80 3R 27625083 27625167 ACGAAATATACGACGCTGGT 59 27625210 27625228 TAGGCCTAAACGGTAGCTG 58 NA Drosophila melanogaster 61 CG5463 FBgn0039153 FBtr0084584 3 1 1 80 3R 19954341 19954423 TAGATGTGGAGGATTGCTCC 59 19954280 19954298 GGAGATTTATCAGCTCGGC 58 NA Drosophila melanogaster 61 Ccap FBgn0039007 FBtr0084333 1 1 1 94 3R 18526762 18526833 ATTTACAGGCTGTGGACGA 59 18526686 18526710 CATTGTTATAGGGTTTCTCTTCGAC 60 NA Drosophila melanogaster 61 lbl FBgn0008651 FBtr0300061 1 1 2 80 3R 17259038 17259058 GCAAATCAAGTGGAGACACTC 59 17252817 17258997 ATGTACTGACCTGCTCTTCG 59 NA Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0081756 3 1 2 112 3R 3733210 3733292 AAATTTGTTGATGCGGCTG 57 3733366 3733386 TAGAGATGGGAGTTAGATGGG 57 NA InUTR Drosophila melanogaster 61 Ccp84Ac FBgn0004781 FBtr0081693 1 1 1 126 3R 2521817 2521900 CTTTCAAGCTCGTTGCTCTG 59 2521710 2521728 TGGTAGATCACATGCTGGG 59 NA Drosophila melanogaster 61 CG8798 FBgn0036892 FBtr0074967,FBtr0273410 1 2 2 80 3L 19603759 19603778 TTTAGGAGCATCCCTTTCCG 59 19603640 19603719 TGTAGACGTTCTGGGATATCTG 59 NA Drosophila melanogaster 61 CG16775 FBgn0036767 FBtr0290228 2 1 1 60 3L 17879572 17879591 GATCCCGATGGTTACTACAC 57 17879531 17879549 CTGGCAGAATGTTACTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SRm160 FBgn0036340 FBtr0075883 2 1 1 92 3L 13031676 13031694 TTTCAGCGATCCAATTCGC 59 13031750 13031838 GTTGTTGAAGCGTCTTGGA 58 NA Drosophila melanogaster 61 can FBgn0011569 FBtr0076299 3 1 1 99 3L 10260042 10260137 CATCTAGTGATGAAGTGTACGT 57 10259964 10259986 GGTTTATCCTTGTTATCCTCCAG 58 NA Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076654 1 1 2 147 3L 8514765 8514843 TTTGAGAAGCTGCTCAAGTG 58 8514637 8514655 ATGGTGTACCCTTGAAGGC 59 NA Drosophila melanogaster 61 Uhg4 FBgn0083124 FBtr0300230 3 1 1 116 2R 4983088 4983106 TCTGTGATTACTAGGCGCT 58 4983454 4983663 AAGACCGATCGTCTGTCTC 58 NA Drosophila melanogaster 61 CG30412 FBgn0050412 FBtr0072044,FBtr0072043 2 2 2 64 2R 19206035 19206053 GAGAATGGGCAATGTGCAG 59 19205989 19206007 CCTTGTACGTGGAGACGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4554 FBgn0034734 FBtr0071833 2 1 1 80 2R 18378872 18378892 GATTCGCAATATACGCTTCCT 58 18378931 18379013 GTAAACATAGCCGTTCTTATGC 58 NA Drosophila melanogaster 61 CG8155 FBgn0034009 FBtr0087391 1 1 1 89 2R 11209382 11209488 AAGTGAAGAAATGCGAACCC 59 11209312 11209330 GGGAGTACAACACCTCCAG 59 NA Drosophila melanogaster 61 SMC2 FBgn0027783 FBtr0087461 2 1 1 81 2R 10739569 10739590 TGTAAACAATCCCAACTTCCTG 59 10739447 10739528 CATTGACAGAACCTCCTTGG 58 NA Drosophila melanogaster 61 Hey FBgn0027788 FBtr0088869 3 1 1 194 2R 3884917 3885348 TCCAAGGAACAAATCTCGC 58 3884741 3884759 GGTCAGCTGAAGGATTTCG 58 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199,FBtr0079842,FBtr0079841 3 3 3 114 2L 9622203 9622224 GGAATGGTTCGATTAGAAAGCA 59 9622298 9622374 CATTGCGTCCTTCACTTTCC 59 NA Drosophila melanogaster 61 CG33723 FBgn0053723 FBtr0091721 2 1 1 97 2L 9440162 9440253 CCACTCCTGTCCATATAATAACGA 60 9440088 9440106 CACCTTCCGGATAAGGGAG 59 NA Drosophila melanogaster 61 Hsp60B FBgn0011244 FBtr0078000 2 1 1 60 2L 729210 729230 AACGCCCTTGTAATGATATCC 58 729249 729270 GACCTTTAACTATTTGCGAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11911 FBgn0031249 FBtr0078098 2 1 1 60 2L 320990 321009 CAAGGACTGGATTGTGACTG 58 320949 320968 AATGATGCTCATGCCTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11555 FBgn0086856 FBtr0078128 2 1 1 60 2L 274589 274609 CCTTATCGAAAGAAGGGACCA 59 274628 274649 ATTCATTATGTGGCCCTTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6555 FBgn0032367 FBtr0080270 1 1 1 60 2L 11591617 11591638 TTCACCATTATCCTGTTTCTGG 58 11591578 11591600 CTGGAAGTACACTTTCAGTTGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mtTFB1 FBgn0261381 FBtr0302272 2 1 1 60 3L 11703466 11703486 CGTCCCTTTGAACTAACTGTG 59 11703507 11703526 GATGCTCCGAATAGACTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 fig FBgn0039694 FBtr0085538 3 1 1 60 3R 25605958 25605976 CAATCCGGTAAATCCTCGC 58 25605916 25605934 TCTTCGATCTTCCCTGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ix FBgn0001276 FBtr0088154 1 1 1 60 2R 7247233 7247251 GAGATCCACTTGAAGACGG 57 7247191 7247212 GATAGTGATTGGAGGAGTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)01810 FBgn0010497 FBtr0080292 1 1 1 80 2L 12027813 12031906 TATCGAGGTATTTCGTGATACCC 59 12031946 12031964 GCATCGTGTAGGCATTCAG 59 NA Drosophila melanogaster 61 CG14071 FBgn0032312 FBtr0080178 3 1 1 60 2L 10888646 10888664 TTGGATCACGAATTGAGCC 58 10888604 10888622 CTGCCAAATTATCCTCGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 2 2 2 83 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872353 4872513 CAGAAATTGTCGTTCCCGG 59 NA Drosophila melanogaster 61 CG3225 FBgn0031631 FBtr0077416 1 1 1 121 2L 4815846 4815924 ATGATAGGTGTGAAACGATGC 58 4815745 4815763 TGATGTTTCAGGGACGAGG 59 NA InUTR Drosophila melanogaster 61 CG11284 FBgn0030056 FBtr0071222 1 1 1 267 X 8581518 8581536 ACTTCCATTGGTCGGACTG 59 8581766 8581860 GATAGGCAATCGGAATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12112 FBgn0030048 FBtr0071233 2 1 1 81 X 8453731 8453754 CCAATTATGTATGAGGAGGATCTG 58 8453600 8453694 GCATGGAATTCGTATAGATCCC 58 NA Drosophila melanogaster 61 CG13248 FBgn0036984 FBtr0078234 2 1 1 101 3L 20402754 20403380 TCGACATCGCTCTATTGGG 59 20402671 20402690 ATAATATGATCCCGGGTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16787 FBgn0034940 FBtr0072207 2 1 1 60 2R 19844311 19844330 CACTACGTCAAACAGATCGC 59 19844270 19844288 TCACGTAGGCGTACTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM10 FBgn0033835 FBtr0087654 2 1 2 60 2R 9295398 9295419 ATAGGAATGGTCATACCATCGT 58 9295440 9295514 CCGTTTCAGTAGTGCTGAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 3 5 5 80 3L 8778946 8778964 GTTATATGTCCAAGCCGGG 58 8779006 8779082 CATCCTCAAATTTGAGAACCG 57 NA Drosophila melanogaster 61 CG4140 FBgn0028535 FBtr0080728 1 1 1 129 2L 15007153 15007221 GACAAGAACCCACAAAGCAG 59 15007043 15007063 TGTATCCGTCGTTATCCTTGG 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 3 5 5 80 X 21227988 21228077 CTATCTGACCAAGGGCTGG 59 21228119 21228139 TCACATTTCACATGGATCCAC 58 NA Drosophila melanogaster 61 CG5800 FBgn0030855 FBtr0074453 2 1 1 103 X 17530777 17530872 TTCTCATACCCGTTCTGGAG 59 17530938 17530956 GATCTGGTAGGCTAGCTCG 59 NA Drosophila melanogaster 61 CG34326 FBgn0085355 FBtr0112528 2 1 1 60 X 16926439 16926457 GTGAGTACCACGAATTGGG 58 16926397 16926418 GTTGATGGTAGATGGTACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9240 FBgn0030669 FBtr0074060 3 1 1 145 X 15594833 15595032 ATTTCGTCCTGTGCAAAGG 58 15594706 15594725 GAACTGATCGGCTTTGATGG 59 NA Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089701,FBtr0089702 1 2 2 60 X 15471335 15471355 GACAACATTGGTATTCGATGC 58 15471295 15471314 CTGGATGGATGTAGGACCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 2 3 3 85 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219667 15219691 CTCTTGTAGTTCTAGTTTCTTCAGC 59 NA Drosophila melanogaster 61 CG32638 FBgn0052638 FBtr0300453 1 1 1 127 X 13020131 13020149 CATGTTCTGGTCGATGCAC 59 13017712 13017816 CCCAGCCATTCATAATGCC 59 NA Drosophila melanogaster 61 CG34323 FBgn0085352 FBtr0112525 3 1 1 81 X 11964626 11964650 GACTATATGTCGAGATATCATGCTC 58 11964686 11964762 TGCCATTATTGGTTTCCATCTC 59 NA Drosophila melanogaster 61 RpII215 FBgn0003277 FBtr0073542 1 1 1 80 X 11461122 11461143 CTGAGTACAACAATCTAAAGGC 57 11460999 11461081 CACAAGCAATAACCTGGGA 57 NA Drosophila melanogaster 61 CG1597 FBgn0030289 FBtr0290227 1 1 1 147 X 11240370 11240390 TTCTTACGCTCAAGAAACTGC 59 11240177 11240195 TATGTGCCCAACACTTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18292 FBgn0030269 FBtr0073437 3 1 1 72 X 11032103 11032121 ATATCCAGGCCGTAGAGTC 58 11032157 11032175 AAATTCTGCACTTGGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12119 FBgn0030102 FBtr0071336 1 1 1 62 X 9103492 9103510 AAGAAGAGCTTCACCTGCA 59 9101087 9103466 GATGAAGGCACCTTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Bx42 FBgn0004856 FBtr0071350 2 1 1 86 X 8999982 9000268 ATATCCACTAGGTCTGGGAG 57 8999915 8999934 TTAACCTTTCCCTTGTCGTC 57 NA Drosophila melanogaster 61 CG4617 FBgn0029936 FBtr0071019 1 1 1 80 X 6997756 6997838 TCTCCAGGATCTAGACTTCAC 58 6997696 6997714 GTGTTCTTGTCCCGATTGG 58 NA Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 1 2 2 80 X 6868809 6868828 TACGTGTTCATCTGGTTCTG 57 6868670 6868766 AAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091672 3 1 3 86 X 6766877 6766895 GAACAACCATAGTGGTGGC 58 6766945 6771955 GCTAGTGACATGTGGTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG3149 FBgn0027564 FBtr0070846 2 1 1 124 X 5587491 5587509 GCACCTACTACATCAGGCA 59 5587316 5587406 ACTTTGGTACCAATAACAGACG 58 NA Drosophila melanogaster 61 CR40728 FBgn0085769 FBtr0114219 2 1 1 60 U 9902227 9902246 TTATTTACGTGAGGTCTCCG 57 9902186 9902205 GAATCATCCAGTAACACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 1 4 4 80 4 1210570 1210593 GCAATCATGTACAATATACCCTCC 59 1210629 1210708 TTTCAACATCGCTATTCTCCTG 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224,FBtr0100296 2 5 5 82 4 1035457 1035475 TAGTGGATTCCTGCCTGTC 58 1035344 1035411 TGAGTCTTTGCCCAATCGA 59 NA Drosophila melanogaster 61 CG32021 FBgn0052021 FBtr0089244 1 1 1 87 4 929764 929783 TGTCCAAGATCACGAAAGTG 58 928542 929716 CCAAAGACCCTAAACCTTTGG 59 NA InUTR Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0089793,FBtr0301341 3 3 3 80 4 763162 763418 ACTCTGTTGTGGAAGACTCG 59 763458 763479 CCTTGTAGAACTTGAACGTAGG 58 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 3 4 4 81 4 738484 738502 TGACTGACAGCCCTAACAG 59 738544 739909 TTAATGGTACTGACTGAGGGAC 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 3 8 8 168 4 157779 157853 GTCGAGCAACCTTAAGACAC 59 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305b FBgn0082975 FBtr0113591 1 1 1 99 3R 24428068 24428086 TACTGACAAATTGACGGGC 58 24428149 24428167 ACATTCGCATCACATAGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3091a FBgn0082979 FBtr0113579 3 1 1 71 3R 1422493 1422513 TCTGGTACGTAATTGCAAGAG 58 1422442 1422461 TACGTTGTTCAGTGAATGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp99d FBgn0039684 FBtr0085455 1 1 1 60 3R 25540373 25540392 AGGATCTAGAGAAGTGTCGC 58 25540415 25540433 AAACACCTCAGGGTAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Slu7 FBgn0039626 FBtr0085418 1 1 1 80 3R 24863871 24863889 ACTCGGCCTACTATGATCC 58 24863753 24863828 CAAACTCAGCTTCCTCTTCG 59 NA Drosophila melanogaster 61 CG9986 FBgn0039589 FBtr0085304 3 1 1 100 3R 24433344 24433362 CAGTGGTGCATCAGAAGAG 58 24433425 24433503 AGTTGCAAGGTGCTTAACTC 58 NA Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 1 2 2 80 3R 23455221 23455299 GGCATAGATCGGATGTTATCCT 59 23455339 23455358 AGATGATGCCCGAACTATCG 59 NA Drosophila melanogaster 61 Cyp6a18 FBgn0039519 FBtr0085183 1 1 1 85 3R 23305530 23305610 GAAACTCTACGCCATTATACCA 58 23305656 23305674 ACAAATTTGGGATTGCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31075 FBgn0051075 FBtr0085080 3 1 1 83 3R 22812875 22812967 GAGGGAGATAAGGCTGATATCG 59 22812813 22812831 ACTCAATTTGCGCCATTCC 59 NA Drosophila melanogaster 61 CG31075 FBgn0051075 FBtr0085080 2 1 1 82 3R 22812875 22812966 AGGGAGATAAGGCTGATATCG 58 22812813 22812831 ACTCAATTTGCGCCATTCC 59 NA Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 1 1 1 60 3R 22772351 22772424 ACTTATGCGCACGTTTAGAG 58 22772443 22772465 ATGAATCCACTCGGACTTATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 T48 FBgn0004359 FBtr0085065 1 1 1 127 3R 22709886 22709904 TCAGTGGAGGCTTCAAGTC 59 22735247 22735265 CATTGGGCACTTGATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31087 FBgn0051087 FBtr0084855 3 1 1 107 3R 21137433 21137453 GGGCCAATAATGTGATGTACC 59 21137276 21137364 AGTACAGATCATTGGCCGG 59 NA Drosophila melanogaster 61 CG17782 FBgn0039195 FBtr0084624 1 1 1 81 3R 20196734 20196929 TATCTGGACAAACGAGGTCAC 59 20196673 20196691 CATGCTCCGTCGATTTCTG 59 NA Drosophila melanogaster 61 eIF4G2 FBgn0260634 FBtr0089623 1 1 1 80 3R 19639523 19639744 GATCCTGAATCTGACATCAAAGAC 59 19639466 19639485 CTCTTCGTTGGCTAAATGCT 58 NA Drosophila melanogaster 61 CG4723 FBgn0039023 FBtr0084318 3 1 1 60 3R 18589286 18589306 GATCTACCAATCGGAACAGAC 58 18589246 18589265 CACATGACTGCCCATATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31159 FBgn0051159 FBtr0084270 3 1 1 80 3R 18440609 18440685 ACTGCTTTGGAACAGAAGTG 58 18440725 18440746 TCCTAACTAGGGTTAATGGACC 58 NA Drosophila melanogaster 61 CG12278 FBgn0038847 FBtr0084003 2 1 1 60 3R 16870359 16870377 ACCATCGAAAGTCCAAGGT 59 16870401 16870419 TCGCGATGGTACATATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17278 FBgn0046763 FBtr0084047 3 1 1 112 3R 16847303 16848407 CAGTATTGTTGGCCATCGC 59 16847209 16847227 AATGGATCGGTACTCCTGC 59 NA Nonspecific Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787,FBtr0083872 2 2 2 81 3R 16125060 16125078 AAGTCACCGATGAAAGGTG 57 16125120 16125197 TGAGCACACTGTTATTCATCTC 58 NA Drosophila melanogaster 61 CG4854 FBgn0038766 FBtr0083830 3 1 1 84 3R 15854485 15854503 ACAATGTCTACTCAGAGCG 57 15854551 15854634 TGACAGATTTCGCATTCGT 57 NA Drosophila melanogaster 61 CG34138 FBgn0083974 FBtr0113486 1 1 1 80 3R 15460927 15461003 AACATTGGTGAACTATCTGTGG 58 15461041 15461062 GCCTTCACCCAAATTATAAACG 58 NA Drosophila melanogaster 61 ATPsyn-d FBgn0016120 FBtr0083727 3 1 2 131 3R 14920731 14921127 TCGTACTCAAAGTTATCTGTGC 58 14921219 14921237 TCCGACTTGGTCTTGAAGG 59 NA InUTR Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 1 3 6 86 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079436 14079454 AAATACGACTGCGGAACCA 59 NA Drosophila melanogaster 61 CG14314 FBgn0038581 FBtr0083560 1 1 1 108 3R 14042507 14042525 GAACTGCTCAAGTTCCAGG 58 14042594 14042677 GAAGATCCTCCATTATGAGCAG 58 NA Drosophila melanogaster 61 CG7397 FBgn0038543 FBtr0083531 1 1 1 80 3R 13599077 13599213 CCTTCATGGACACGTTCTC 58 13599015 13599034 CATTCTTTGCCCTATTGCAG 57 NA Drosophila melanogaster 61 SF1 FBgn0025571 FBtr0083456 2 1 1 80 3R 13367453 13367472 GACCTTCATTCCTGGAATGC 59 13367512 13368146 TGAAATTGAACTAGGTAGGCCT 59 NA Drosophila melanogaster 61 CG12753 FBgn0038427 FBtr0083315,FBtr0100643 2 2 2 80 3R 12264485 12264505 ATGAGAAGGAATCGCTATTGC 58 12264364 12264447 CACTATTGTTCAGATCGAGTACG 59 NA Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 2 2 2 107 3R 12030246 12030624 CAACTACAAATATGAGAACGGC 57 12030160 12030180 CCCTTCTTCAAGTATTCCAGC 58 NA Drosophila melanogaster 61 put FBgn0003169 FBtr0082977 1 1 1 80 3R 10447045 10447064 GAAGTTCAGGAGAGTGTGGT 59 10446924 10447003 TACATTAAGTCCCGGATGGG 59 NA Drosophila melanogaster 61 CG42375 FBgn0259721 FBtr0299976 2 1 1 74 3R 9605477 9605495 TTGATCGAGGAACTCCAGG 58 9605588 9605606 GTCAATGGAGTTGCACACG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34044 FBgn0054044 FBtr0100099 1 1 1 150 3R 9539156 9539177 CCATGGCATATGTATGAATTGC 58 9538980 9539048 CAAAGTGAGGTATGCAAATGTC 58 NA Drosophila melanogaster 61 CG15887 FBgn0038132 FBtr0082776 3 1 1 82 3R 9114365 9114383 TTGGCATGTGATTTGGTGC 59 9114005 9114319 AAAGTACGACTTTCCGCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG42573 FBgn0260793 FBtr0301436 1 1 1 86 3R 8957146 8957164 CACTGGATTGTGTCAGGTG 58 8954279 8957098 CAATTAATTGCCTTGAGCCAG 58 NA Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 1 2 2 141 3R 8509987 8510005 TATTTCAAGCGGTACCTGG 57 8509805 8509882 AAACGAGGCTCATTATCCG 57 NA Drosophila melanogaster 61 GstD4 FBgn0010040 FBtr0082571 2 1 1 60 3R 8200208 8200229 TATTACCCATTCATCCGTACTG 57 8200245 8200268 CTTCGACCTTCTTATAATTCTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 3 3 3 106 3R 7792843 7792923 TGTCCAGATGCAATCCCTG 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 CG33189 FBgn0053189 FBtr0081940 3 1 1 60 3R 4606011 4606029 CAATGCACCTGGAAATCAG 57 4605969 4605988 GTTGGACCACTTTACACTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543,FBtr0300544 2 3 3 80 3R 4544080 4545530 GGACTTTCAACAAGGCTGG 59 4545574 4545592 AGCAGTAGATAGGAGACGC 58 NA InUTR Drosophila melanogaster 61 CG7963 FBgn0037584 FBtr0301759 2 1 1 60 3R 4188610 4188628 ACCATCTGGTGAATTCCGT 59 4188648 4188670 GATATCCACCAGAAGTTCATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0114520,FBtr0081756 3 2 2 60 3R 3733513 3733531 AGAGCCAGTTTATCATGCG 58 3733618 3733637 TTTATTGCCTCATGGACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 RacGAP84C FBgn0045843 FBtr0081580 3 1 2 85 3R 3113074 3113217 CCTACTTTAGATCAATGGTCAACC 59 3113261 3113279 GTGACTGCATCCATTCTCG 58 NA InUTR Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081616 1 1 2 215 3R 2943391 2943411 GGATATTTCTCTTGCGAACCT 58 2941384 2941402 TGGAATACATAGCCGCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1138 FBgn0037456 FBtr0081703 3 1 1 60 3R 2423434 2423458 GGAAGTTCTAGAAGAATCAAACGAG 59 2423398 2423422 CTCATCGTAAATATCTTCGAGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spec2 FBgn0044823 FBtr0078739 1 1 1 123 3R 1443368 1444215 ATACACTCGCTACATGCCT 58 1443263 1443281 TATGTCTGCTGCTCCTCTC 58 NA InUTR Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 2 3 3 80 3R 1092745 1092854 GACCAATCAGATTGACTCTGTG 59 1092895 1092913 TCCCTGATGTGGTAGTTGC 59 NA Drosophila melanogaster 61 CG17387 FBgn0037276 FBtr0078880 1 1 1 81 3R 610093 610169 ATTCAGCAGAACCTGACAC 57 610030 610048 CCAAGATCACAAGCTGGAC 58 NA Drosophila melanogaster 61 tRNA:CR32093 FBgn0052093 FBtr0076083 1 1 1 60 3L 11794620 11794642 GGTTCTATGGTGTAATGGTTAGC 59 11794582 11794600 AGATTTGAACTCGGATCGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 1 2 2 124 3L 21276339 21276358 TTTCCATGATGGTCATCTCC 57 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 ppl FBgn0027945 FBtr0078412 3 1 1 91 3L 21273886 21273965 GTTGCTATGAGAAGGGCTG 58 21273813 21273833 GAAGGCTTTGTACTGATCCTC 58 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288,FBtr0301579 3 2 2 233 3L 21025964 21025982 TTAGTATTCTCGCGGAGCA 58 21026243 21026261 TTACCTGAGCTCGGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13813 FBgn0036956 FBtr0074827 2 1 1 96 3L 20225582 20225666 CTCTATAGACATGAGCCTAATTCTG 58 20225720 20225738 GGACTATGTCCAGTACCGG 59 NA Drosophila melanogaster 61 serp FBgn0260653 FBtr0074953 1 1 1 89 3L 19698968 19698986 ATGGAAACTGCATTGAGCG 59 19695587 19698916 CGTTGTCGATATCACAGGTG 58 NA Drosophila melanogaster 61 CG32206 FBgn0052206 FBtr0089796 3 1 1 82 3L 19366646 19366665 AATATCCGAGACGAGAAGCC 59 19365494 19366601 AGGCCGTATCTCACAACTG 59 NA Drosophila melanogaster 61 mRpL21 FBgn0036853 FBtr0075022 3 1 1 84 3L 19248041 19248059 TATGCGTCAAATGCTACGC 59 19247899 19247917 AATTACCGGCGATATGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 3 2 2 80 3L 18796090 18796175 GTTGCTTAACAAGCTCTGTCC 59 18796030 18796050 TCTATCTTGAACTCCCGTAGC 59 NA Drosophila melanogaster 61 skl FBgn0036786 FBtr0075119 2 1 1 90 3L 18432688 18432706 CATCACCATGTGCAAGGTC 59 18432616 18432634 TTGTATTTGAACGGTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U4-U6-60K FBgn0036733 FBtr0075209 3 1 1 60 3L 17506557 17506579 CTTCGATCTAGAGATGGAAATGG 58 17506519 17506537 CCGCTCAAATTCCTCAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32174 FBgn0052174 FBtr0075227,FBtr0299819 3 2 2 82 3L 17423270 17423288 CGAGATATCGCCCTTCCAG 59 17423149 17423225 TCATGTCATGACGTCTTGGA 59 NA Nonspecific Drosophila melanogaster 61 CG12436 FBgn0036637 FBtr0075401 2 1 1 72 3L 16522668 16522737 GTTTGATTGCGAACGTCGA 59 16522614 16522632 TTTAAGTCCCACAACGGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7650 FBgn0036519 FBtr0075591 1 1 1 60 3L 15602619 15602637 CTCAGCGATGACTTCTTCG 58 15602577 15602598 CTATAATGCCGTGCTCAATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33986 FBgn0053986 FBtr0100031 1 1 1 60 3L 15517951 15517970 ATCCCATAGAGACTCCTCCA 58 15517910 15517930 ACCATGTTATTCGGATCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9238 FBgn0036428 FBtr0075724 3 1 2 82 3L 14543148 14543167 TATTCAGTCACAGTCCACCC 59 14540570 14543105 CTCGTCATTGTAGTTCAACGA 58 NA Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 3 2 2 98 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002076 13002094 TGGGTTTCGCTAAATCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 2 2 2 60 3L 13000064 13000083 ACATTCGTTACCCTTTCGGA 59 13000103 13000124 ATTCGATCTAGTTGCTTCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010,FBtr0076009 3 2 2 108 3L 12266679 12266697 ATCGACAAGGTGGTCTTCG 59 12266133 12266607 CAGCAATGTTCTGCAGCTC 59 NA Drosophila melanogaster 61 CG11588 FBgn0036221 FBtr0076038 3 1 1 60 3L 11915368 11915390 CAACTACGGAGAATATGATGGTG 59 11915408 11915428 CTACTACTTTCGGTTGGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300726,FBtr0300097 1 3 3 81 3L 11683204 11683342 GCACCAAAGAGTTAAAGAAACG 58 11683144 11683162 TGTAGCCTCTCGAGTTTCC 58 NA Drosophila melanogaster 61 CG32079 FBgn0052079 FBtr0300188 3 1 1 80 3L 11019701 11019769 TGAATCTGTTGGAGTGATCCT 58 11019809 11019829 TTTAGAACTCCACAGGTTCCC 59 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 1 3 3 172 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687662 10687681 CACAGTATCTCTGTCCACAG 57 NA Drosophila melanogaster 61 CG32064 FBgn0052064 FBtr0076288 1 1 1 60 3L 10484961 10484979 GGCATTACCGTCGAAATCC 59 10485003 10485021 GGAACGAATGAAGACGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32052 FBgn0044328 FBtr0273387 3 1 1 83 3L 9798475 9799012 AACAGGAAACGGTATACATCG 58 9799057 9799075 AAGTCAACTGGTTGTGCTG 58 NA Drosophila melanogaster 61 CG4447 FBgn0035980 FBtr0076444 2 1 1 60 3L 9358070 9358090 TATCCAAGAATGCCAAAGCTC 58 9358112 9358130 TTCTGAACGCCTCGTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm7 FBgn0020633 FBtr0076585 1 1 1 80 3L 8884872 8884957 AGACCGAGAATCTATCAAGACC 59 8884998 8885016 GATCCGTAGACGAACTCCT 58 NA Drosophila melanogaster 61 Cdc6 FBgn0035918 FBtr0076647 2 1 1 80 3L 8625526 8625546 AAGGAGTTCAATATGAAGGCC 58 8625388 8625485 AGGCTTTAGAGTGTCTTGCT 59 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 3 2 2 73 3L 8115214 8115287 AAATACTACAGTGGCGAGC 57 8115324 8115342 TAATTGGAGGCCTCATGGT 58 NA DesignNoJunction Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302546 2 1 5 216 3L 7361073 7361170 TGTTAAAGGTGAAGAAGCGC 59 7360876 7360894 TAATCACCGCAGTACTCGT 58 NA DesignRelaxed Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 3 1 1 285 3L 6955049 6957514 AAGTTGCCCATTTACGAGC 58 6954299 6954318 GTATGTGCATGATGCTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Lcp65Ab2 FBgn0020643 FBtr0076992 1 1 1 60 3L 6140077 6140095 GCTGATGAGAACGGATACC 57 6140119 6140137 CTTAAGCAACTGGTGCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4835 FBgn0035607 FBtr0077148 1 1 1 60 3L 5474345 5474364 GCAAATGGGTCATTGTCCTC 59 5474385 5474405 CTCATCGCATACAAGCAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ack FBgn0028484 FBtr0073211 1 1 1 80 3L 4111571 4111590 CGTTTATGCTATGATGCTGC 57 4111630 4111716 GCCAAATATTCTTTGAGAGCAG 58 NA Drosophila melanogaster 61 CG14983 FBgn0035479 FBtr0073170 1 1 1 60 3L 3949071 3949095 CAAATATGAGTACTTCACTCTGCTG 60 3949035 3949055 TTTCAAATAGCTGTGCGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14960 FBgn0035428 FBtr0073051 2 1 1 104 3L 3271266 3274052 CAGCCCTCATTATGTTTCTCAC 60 3274117 3274135 TTATCTTGGCTGCAAAGGC 59 NA InUTR Drosophila melanogaster 61 CG32278 FBgn0052278 FBtr0073033 1 1 1 65 3L 3171099 3171176 TCAAGCAGATCAAGGAATCTG 58 3171203 3171221 GTAGAGTCTTCAGGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072781 2 1 3 84 3L 1798915 1799023 TAGGAGAGGTTTAGGACAAAGTG 60 1799067 1799085 CTCTATCCCACTTCCGCTG 60 NA InUTR Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292,FBtr0072774 1 2 2 80 3L 1758642 1758721 GGGACCTGAAAGGAAACTC 57 1758763 1758783 ATACTCTCCACAATGTTGCAC 58 NA Drosophila melanogaster 61 CG9168 FBgn0035216 FBtr0072692 2 1 1 77 3L 1411420 1411439 ATATCAGGTGATAGGTCGCA 58 1411528 1411547 CTCAAGGGTTGTAGTTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33409 FBgn0053409 FBtr0086401 1 1 1 60 2R 15633061 15633079 ATACATCGGTTCTCGTCCG 59 15633019 15633037 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15873 FBgn0035003 FBtr0072357 2 1 1 60 2R 20317551 20317573 GATACATGTATCACACTTGGCTG 59 20317460 20317479 GTTCATTCGAATATGGGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 angel FBgn0016762 FBtr0072083 3 1 1 60 2R 19582367 19582385 CCTATCGTCCTGACTGGTG 59 19582409 19582427 CGAGGAATTCAATAGGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta5R FBgn0034842 FBtr0072045 1 1 1 96 2R 19197118 19197136 ATCCCTACGAACTGATGGC 59 19196984 19197002 CCGTGATCGAAATCCATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9308 FBgn0034681 FBtr0071749 2 1 1 60 2R 17922517 17922535 ACGATCATGCCAATGTCAG 58 17922558 17922577 AAGCCACCTTCCATTACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42362 FBgn0259708 FBtr0299961 2 1 1 60 2R 17552283 17552303 TTTGACTCCAAGGGTATTCTG 57 17552325 17552343 ATATCCAGTGCTCCTTGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL29 FBgn0016726 FBtr0071593,FBtr0071594,FBtr0071592 3 3 3 138 2R 17181653 17181740 AGTCCACTCTGGGTATGGA 59 17181842 17181860 AGAGTAACAGGCTTTGGCT 59 NA Drosophila melanogaster 61 CG7461 FBgn0034432 FBtr0300283 1 1 1 60 2R 15194538 15194556 AAGATTTCCACCATCGCCA 59 15194578 15194598 AGATTCCAGTCGTAGTCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15099 FBgn0034400 FBtr0086628 2 1 1 80 2R 14731159 14731240 GATAAAGATATCAGTGCCTCAGAC 59 14731102 14731121 CTTGAGCTTCTTGATGCTCC 59 NA Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 2 2 3 186 2R 14664324 14664411 CTTACACCAACAGACATGTCG 59 14664158 14664176 CGAAGACATGCAGCTTGTG 59 NA InUTR Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 1 2 3 185 2R 14664324 14664411 CTTACACCAACAGACATGTCG 59 14664159 14664177 GAAGACATGCAGCTTGTGG 59 NA InUTR Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 1 2 2 125 2R 14547589 14547607 GCTTAAATTGTCGGTGGCC 59 14547427 14547503 TAAATTGAGCTTAAAGGCAGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0301148,FBtr0086690,FBtr0086686 3 4 8 88 2R 14311972 14311990 AACCTCAAGGAGAGCACTG 59 14312162 14312385 CGTTGGTATAGTGGTGCCT 59 NA Drosophila melanogaster 61 aft FBgn0026309 FBtr0089549 2 1 1 80 2R 13674238 13674310 AGGATGAGATTAAATGGCGC 58 13674350 13674371 CGCTGATCATCTGGTTTATAGC 59 NA Drosophila melanogaster 61 HLH54F FBgn0022740 FBtr0089547 2 1 1 181 2R 13645144 13645598 CCAGTTCTCAAAGCTCCCA 59 13645743 13645761 CTGCTTGATGTAGAGCGTG 58 NA Drosophila melanogaster 61 CG42562 FBgn0260764 FBtr0301266 2 1 1 80 2R 13573541 13573622 TTCCCTGAGGATTGATCTCG 59 13573662 13573683 CCCTTAACTTGAAGCACATCTG 59 NA Drosophila melanogaster 61 CG30108 FBgn0050108 FBtr0273298 1 1 1 61 2R 13557120 13557192 TATCAGGAATGCGTCAAGC 58 13557214 13557235 GGATCTATCTCTTGCAAATCGA 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603,FBtr0273447,FBtr0273446,FBtr0086949,FBtr0086948,FBtr0086950,FBtr0300605 3 7 8 107 2R 13414810 13414889 CAGGAGAAGGAGGATTTGGA 58 13414722 13414741 GTACTTGTCCAAATCCACGG 59 NA Drosophila melanogaster 61 Acp54A1 FBgn0083936 FBtr0110768 1 1 1 101 2R 13021037 13021055 AACCGACATTCCTGTTCGA 59 13021120 13021138 TACAAATCCAAGGCGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a8 FBgn0013772 FBtr0087455 3 1 1 122 2R 10775311 10775391 TTTAGATGAAACTCTGCGACTG 58 10775210 10775229 GGTATGATGACCGATTGACC 58 NA Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0301195,FBtr0087899 1 2 2 81 2R 8222844 8222862 ATAAGCCCAAGCAAACAGC 59 8222962 8222980 TTAAAGCTGCTCACCTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112425 1 1 2 99 2R 8052991 8053138 TGTTGAAGGCGATTATCGT 57 8052910 8052928 TTGTGGTTCAGATGATGGG 57 NA Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088129 2 1 2 145 2R 7255898 7256065 ATAAGTTTAGGCCTCGAAACG 58 7256171 7256190 GGAAGGGCTTTAGGAAATCC 58 NA InUTR Drosophila melanogaster 61 Or47a FBgn0026386 FBtr0088111 1 1 1 194 2R 7138920 7138938 AACCTGAAGACGGAGAGTG 59 7139095 7139185 GCGAACAATCGATGAGAAGG 59 NA Drosophila melanogaster 61 BBS4 FBgn0033578 FBtr0088202 2 1 1 81 2R 7025182 7025928 ACATCGCATCTGAACAATACG 59 7025971 7025989 TAGCACTCGGCATTATCCT 58 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 2 2 4 173 2R 5015037 5015055 ATTGACGATCGCCTAACGA 59 5013563 5013696 CTCCTTAACCGATTTGACGG 58 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 2 2 2 80 2R 4285171 4285190 CAACTCCATCTTCCTCACCT 59 4284852 4285128 ACTCCATAGCGTTTGAGGG 59 NA Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 3 1 1 60 2R 3828675 3828694 CTATACGCATGGGATTCGTC 58 3828717 3828786 GTGAACAGTAATTGGGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9454 FBgn0033112 FBtr0300358 2 1 1 75 2R 2767396 2767414 CTTTACAGCCGAGTTCCAG 58 2767281 2767300 CTGACCACTGAATATTCGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 1 3 3 80 2L 21681386 21681405 GAGACTCGTTTCACTGACAC 58 21681266 21681346 AAAGTACATGGAAATGGCAGTC 59 NA Drosophila melanogaster 61 His1:CG33852 FBgn0053852 FBtr0091856 1 1 1 60 2L 21516988 21517007 AGTTGAGAAGAAAGTGGTCC 57 21517030 21517048 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33909 FBgn0053909 FBtr0091913 1 1 1 60 2L 21419675 21419693 CGTAATTCGTGATGCCGTG 59 21419633 21419652 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12617 FBgn0040996 FBtr0081351 2 1 1 125 2L 20294780 20294890 CATCTTTGGGAGCAACATGAG 59 20294977 20294995 ATCGGAAATCGAGGAGGAC 59 NA InUTR Drosophila melanogaster 61 CG10561 FBgn0002036 FBtr0081155 2 1 1 67 2L 19114512 19114530 ATAGAATAGAAGCAGCCGC 57 19114561 19114635 ATTCCAAACTTGGCTCACG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Mst35Bb FBgn0013301 FBtr0080681 3 1 1 187 2L 14882384 14882402 AAGCACTGTGACTTGAAGC 58 14882166 14882186 CTGGACTTAACTGCATCAGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4218 FBgn0250844 FBtr0080662 2 1 1 120 2L 14547789 14547878 TCCAGGACTATGGTCATGC 58 14547687 14547705 ATGTTGTTGGCGTTGTGAG 59 NA Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0080621,FBtr0114463 3 2 3 124 2L 14277367 14277385 GTCGAGGACTTCAAGAGCA 59 14277533 14277552 ACATGCTTAGGACGTTATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5781 FBgn0032448 FBtr0080409 3 1 1 60 2L 12697208 12697226 AATGAGTCCCATGCGAGAC 59 12697166 12697184 GCAGCCTCTTATCCAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 1 2 5 170 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278895 11278917 CTGTGACTTGAATACTTGAGGAG 59 NA Drosophila melanogaster 61 CG5604 FBgn0032208 FBtr0080074 3 1 1 86 2L 10282269 10282352 AAAGACAGTCCCGGATTCC 59 10282201 10282220 GGTTGTGAATTGGAGGAACG 59 NA Drosophila melanogaster 61 Rsf1 FBgn0011305 FBtr0080079 3 1 1 88 2L 10263284 10263302 GTGGATAGCCTTCAATCCG 58 10263214 10263232 ATCCGTTCAGTATGTCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Try29F FBgn0015316 FBtr0301665 3 1 1 60 2L 8998968 8998988 GCCTACACCATTGACTTTGAC 59 8999008 8999028 CGTTCTTGGCACTATATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32983 FBgn0052983 FBtr0079737 3 1 1 60 2L 8865925 8865945 GAGCAAGTGGAATTGGAAGAG 59 8865967 8865985 AAACAGTACGGGCAAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13393 FBgn0032035 FBtr0079719 3 1 1 60 2L 8383964 8383983 GTTCTACAACGACTACGTGC 59 8383923 8383941 GAGGTAGATGTCCACCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn7 FBgn0083141 FBtr0079470 2 1 1 82 2L 7583030 7583102 GGCAACAGGTGTTCTTACTC 58 7583144 7583165 ACGGATGATCAGCTATAAACTC 57 NA Drosophila melanogaster 61 ade3 FBgn0000053 FBtr0100353,FBtr0079431 2 2 2 135 2L 7019069 7019142 ATAAGAAGCGCTCCGTATCC 59 7018953 7018973 GACCGTATTTCAGATCTCCCA 59 NA Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 1 1 1 92 2L 6264417 6264435 TTGATTCTCCTCGCCACTC 59 6264286 6264361 AACGATCTTGGAGAAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12512 FBgn0031703 FBtr0079077 1 1 1 63 2L 5342014 5342032 CTCCCGATACATGCTCAGG 59 5340982 5341987 CATCGAGGTGGAAATGCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2955 FBgn0031585 FBtr0077468 2 1 1 60 2L 4150407 4150428 CATTCATAGAACTGAAACGGAC 57 4150446 4150467 TGCTATAAGAGAAACTCGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 VGlut FBgn0031424 FBtr0077769 3 1 1 98 2L 2407007 2407030 GCTAGTATATTGATGGGTCTTTCG 59 2407087 2407168 CCCGGTAGGATTAGCTTGG 59 NA Drosophila melanogaster 61 Ets21C FBgn0005660 FBtr0078079 3 1 2 182 2L 551311 551330 TATCGACAGGTTTCCCAAGG 59 548209 551166 TGGTACGGATTTGGTTCGT 59 NA Drosophila melanogaster 61 ush FBgn0003963 FBtr0078063 1 1 1 80 2L 539382 539401 CAAGATGTGACTTCCAACCC 58 539444 539527 AATGTGGAAACTGGGTGCT 59 NA Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 3 2 2 80 2L 411178 411200 CTACTCTATTCGTGAGGAAATGG 58 411052 411141 TCCACATACCAGGTATAATCCG 59 NA Drosophila melanogaster 61 Rpp30 FBgn0022246 FBtr0078143 2 1 1 80 2L 251576 251597 AAGAACGTTATCTTCAGCAGTG 59 251455 251538 GATAAAGGCCAAATTAGCAACG 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 92 2L 113286 113306 CTACGGAACTTCTCACAAGTC 58 113357 113442 TTTAGGTCCTTGACAATCTTGC 59 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 1 6 6 80 2L 14976 14997 AATTATGTGCCTTATGGACCTG 58 14859 14938 AATTACATCGTTGGATCTTCGC 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078122 1 1 3 80 2L 199914 199932 TGCTTATGTCAGTGGACGG 59 199972 200130 GTAGAATCATTCGGTGTTATGGG 59 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568 2 1 2 121 2L 594375 594793 GAGCAGATACTTCTTCAAGATTCTC 59 594278 594296 TCTTGAACTTGGCCTTCGA 59 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 2 3 3 85 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831773 831791 GTACATGTTCTGCTCCACG 58 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033 1 1 3 103 2L 864783 864884 TTTAAACGACGGAGCTTCAG 58 864699 864717 CTACTGTTTCCAGCACTGC 58 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 2 4 4 88 2L 2224613 2224633 AAATCTACCATCCAGACGGAG 59 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 2 4 4 80 2L 2495480 2495582 TTCGCAATGAGGTTCAAATCC 59 2495624 2495642 AGCACATGACCTGGTACTG 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 1 5 11 178 2L 3626210 3626348 AAGCAGAGAAGGATGGACG 59 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 2 8 9 85 2L 3879058 3884044 AGTTCGAAGGTCAAATGCT 57 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 1 5 6 80 2L 4192682 4192703 ACCTTAAAGACAACAACCACAG 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 1 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343807 4343825 AGTAGAAGGCCTTCAAGGA 57 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077399,FBtr0077400 1 4 6 80 2L 4912768 4925837 ACAGCCAAACGAAGTAACAG 58 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 2 4 11 87 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994955 4994973 CCGGATTTCTTCACATCGC 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0100270 1 4 6 89 2L 5044610 5044629 GCCGTACATAATCATACGGG 58 5044681 5045831 ATGTCGTCAGCTTTCAACC 58 NA Nonspecific Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 1 1 1 71 2L 6558550 6558568 TTATTCCATCGGCCTTCGA 58 6558950 6558968 TCCATTGCACGTAGGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 3 1 1 73 2L 6558550 6558568 TTATTCCATCGGCCTTCGA 58 6558952 6558970 CATCCATTGCACGTAGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410 3 1 2 130 2L 6635398 6635662 AGCTCACAGAACGCTACAG 59 6635286 6635304 ATGTTGCTACCGGTCAGAG 59 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028 1 1 2 81 2L 7182890 7183517 CGAGAGGAAGATAATTGAGTATGAG 58 7183556 7183574 TATGGTGGCAAAGTAGCGA 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 2 4 5 60 2L 7896744 7975196 AAAGAAAGGCGGAAATGCT 58 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300334 3 1 4 150 2L 8174684 8176576 CTGATTAAGCCACGGTTGG 58 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 1 8 9 93 2L 8222292 8222310 GATTACCTGGCACTGATGG 58 8222106 8222235 CTTCGATGCGTATATCGGG 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 1 6 6 80 2L 8261678 8261754 GCTGCATACCAAAGTTCCA 58 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 1 3 6 84 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284054 8284132 AACGGATAACCATCCGGTG 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 2 2 2 110 2L 9923290 9923374 GCAGTTGAGGATTCTACCCT 59 9923199 9923217 GTAGCTACAAAGATCGCGC 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080075 3 1 3 88 2L 10278584 10278656 CTGGATAGTCGATACTACGGC 59 10278516 10278535 AAGTTTGTGATGGTCTGCTG 58 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 3 3 3 80 2L 10512982 10513000 GCTGGTCTACATCTACACC 57 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223 3 1 4 141 2L 11142951 11142971 AAGGGTGAACATTATGGAACG 58 11142232 11142785 TATGGGAACCCGAATATGGG 59 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 1 2 2 126 2L 11991264 11991341 AAATATAGCTCCCATGTCCG 57 11991428 11991448 CATAAATGGAAACCCGATCCT 58 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 3 3 3 82 2L 12037204 12037223 GAACTTTCCATCTGCTGTGC 59 12037051 12037162 GGGATCAGCATAGTCATTAGCT 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 3 1 8 83 2L 12477157 12498534 ATTTCATCGGTGCATCTGGA 59 12458202 12458220 TGAGATGCGACTTGACCAG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 3 2 8 187 2L 12477157 12536283 GACTGAAAGTGCATCTGGA 57 12458097 12458115 TGTTCGACTTGAGAATGCT 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 1 2 17 91 2L 12736802 12737965 CAAGTATTCCGGGTTCTGG 57 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 3 2 2 88 2L 12912879 12912955 TTACGTACAGCACTATAACGC 58 12913005 12913023 AATTGATGCTCAACACGGT 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 3 3 9 80 2L 13274311 13274331 AGCGTATCATACCGATAACTC 57 13274372 13274705 GGTAATTCTGGTAACCACCA 57 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 2 5 5 80 2L 13634168 13634249 GTTCACCTACAGAGATTTCACTG 59 13634289 13634307 CAAATTCCACCAGAGGCTC 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0300845 1 1 3 96 2L 14848243 14848681 GATGAAAGGTGTCGGAATCG 59 14848166 14848184 TTCGTACAGATAGCGCAGG 59 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 2 4 4 82 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065385 15065404 CATCAATAGCCTCCTTGACC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 2 3 9 176 2L 15261625 15261726 GTGGAAATTGAATGCGATACGA 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090004 3 1 4 92 2L 16181895 16182782 GAGTACAACTCTTTAAGGGCA 57 16182894 16182915 CATCATAGACCAGATAGGTTCC 57 NA Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0114470 1 1 3 171 2L 16669674 16672578 ATTCGGCATGCTCATACGA 59 16669521 16669539 ATCTGGACCGCTATGTGAC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 3 3 16 80 2L 16777432 16779103 AAGATGCGCTACCAAATCC 58 16779147 16779165 CTCGATCAGAACCTTCGTG 58 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 2 4 4 85 2L 16820787 16820805 TAACGCCCTAATCCTGAGC 59 16820918 16825419 CAATTATTTCCATGGCTAGACCC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 2 2 10 81 2L 17402473 17404069 GAACATCAACGAGCAAATACTG 58 17404108 17404129 CAGATCGGATACCTTTATGCTG 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290262,FBtr0301442 1 2 10 80 2L 17402473 17404069 GAACATCAACGAGCAAATACTG 58 17404108 17404128 AGATCGGATACCTTTATGCTG 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009,FBtr0301577 1 4 4 80 2L 17418041 17418059 TCAAACAGATGGCCATAGC 57 17417634 17417999 GTTTCAGCTCCACATTAACAC 57 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 3 4 12 95 2L 17717904 17717922 CTCCCTTCAATCCCAACGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 1 4 12 112 2L 17717920 17717939 AGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 2 2 2 88 2L 18082140 18082228 ACATTTACCTTCATTGGCTGC 59 18082278 18082296 CATTCGCATTTAGGGCCTC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805,FBtr0081052,FBtr0081051 2 4 5 167 2L 18384741 18384759 ACTACCAGGTGCGAATCAG 59 18384890 18387301 TCTTGATTGATTTGCCGCC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0081051 3 1 5 87 2L 18391291 18391309 ATATTGTGGAGGGAAGCGT 58 18391359 18392078 TGCCAAACTATAGCCTTTGG 58 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 1 2 4 105 2L 18474947 18475164 TGCAGGATAGGATGAATTCCA 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 2 2 2 83 2L 18679153 18682279 GGAGGATAGTAATGTTAAGAACCC 58 18682321 18682339 GAGTCCAGTGAGTTGAGGA 58 NA Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 2 2 6 97 2L 19410631 19419876 GCCAGGATATGCTCTATTAGC 58 19410554 19410572 CTTGATGTTTGGGCTGGAC 59 NA Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 3 2 2 121 2L 20060345 20060422 GCAACTTCAAGATGGCTGG 59 20060242 20060260 CGTAAGAGTTCGTGCACTC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 2 2 3 111 2L 20061915 20061933 TCAGGCCTCCAATATCTGG 58 20062008 20062161 GTCGTTGTTGAGATCCAGC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 2 2 3 111 2L 20061915 20061933 TCAGGCCTCCAATATCTGG 58 20062008 20062161 GTCGTTGTTGAGATCCAGC 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503 3 1 3 82 2L 21138355 21138726 GAATCTCTTGATCAGGAGACGA 59 21138294 21138312 TGGTAAACCTGCTCCTGTG 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0301276 3 1 3 91 2L 21138773 21138794 TGTTTCCTTCGAACTATGTCCA 59 21138350 21138722 TAGCGTCGTCTGATCAAGAG 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081492 1 1 5 80 2L 21188917 21193343 CTGTCTTCTACTTCGCCGT 59 21188855 21188875 TCTCCGATTCCTCATTGATGG 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 1 5 5 88 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184212 21184288 CGATGAACCAACTTTAACTCAG 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 2 4 4 80 2L 21388772 21388791 CTTTGCCAGATCATATGCCA 58 21388832 21388923 CTACATTTGTTTCATTGGGCC 58 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100511,FBtr0085923 3 2 5 99 2L 21618104 21618507 TTCAATAGCAATGCCACCC 58 21618023 21618041 AACTCTCCGGAGTAACCAC 58 NA Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 3 2 2 80 2L 22842664 22842684 AGGACATATTACATTGCCGGA 59 22842549 22842625 CGAACACAAATGGAATGTTCTG 58 NA Nonspecific Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 1 5 5 80 2R 19474 19550 AATCACTTCAGTTGAGGTGG 57 19590 19611 CAGTCTAAATCAAGGAGATCGT 57 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 3 4 4 82 2R 705345 705363 TTCTATATGCTGTCTGCGG 57 705227 705299 AACGTCAATCTTTAGCCCA 57 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 2 3 3 153 2R 1036566 1036584 TCTGCTTCCTTATCACGCA 59 1040333 1040351 ATTCACGCTGACAAGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 2 4 4 80 2R 1436211 1436232 TATACTGGACCGAATATGTGCT 59 1436270 1436343 ATTGCCACCATGTCATATTTCG 59 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 1 3 4 95 2R 1414860 1414878 ACATCCTAATGGCTACGCA 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 3 2 6 170 2R 1982572 2010405 GTGAATTCTATATCTTCAGGTCGC 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 2 2 2 97 2R 2561685 2561774 TATTCGCAGTGACGAGTCTC 59 2561834 2561852 ATAGGCAAAGGCGTAGTCC 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0300285 2 1 5 91 2R 2640926 2640944 CGATCTCCATCTGATGCAC 58 2640999 2642215 TGGATACTGCAGTTGAAGC 57 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 1 3 6 83 2R 2814317 2816022 ACTTTGACGACTATGCCAC 57 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 3 3 6 95 2R 2814317 2816023 CACTTTGACGACTATGCCAC 59 2814241 2814259 CTTCGCGTTGAGATTCTCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081 2 1 59 86 2R 3247854 3247873 TAAGGTGCTTCAGTTCTCTG 57 3236472 3247807 TTGTACCATCTAAAGACTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111055 1 1 59 91 2R 3236476 3239435 AGTGCCCATCATTAGATGGT 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0300481,FBtr0300480 2 3 8 92 2R 3362871 3362952 AATAAATGCAGGAGATCGGC 58 3361300 3361319 GGTTGTGATGTGAAGATCCC 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 3 5 5 80 2R 3371062 3371165 ACTTTATGTGGGATATCGAGGT 58 3371003 3371021 CGCAAGTGCGATCTTTCTC 59 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088884 3 1 2 91 2R 3819340 3819521 GATGATCTGCCAGACATTCTC 58 3819269 3819287 GAGACCTGAGAGGCATGAC 59 NA Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 3 2 2 100 2R 3860602 3860620 TCTATCTGGAGGACAACGA 57 3860682 3860761 ATATAGAACCTGCAACTCCTC 57 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 1 2 4 144 2R 4757940 4758093 CGATGGACACAATGTGACC 58 4759738 4759756 GTCCATCAGGAGTTCTCCG 59 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 2 2 2 80 2R 4909359 4909482 TAACATTGCTTTCAGGGACC 58 4909298 4909316 TGCAGACTGTAGTCATTGC 57 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501 2 1 2 187 2R 4961786 4961804 CTACAAGACCAATCCTGGC 57 4961955 4962353 TCTTGCGCTCTAACTTACG 57 NA Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 1 2 2 68 2R 4996588 4996606 TTGACTCCATGAACGAGCT 59 4996474 4996494 ACTGTTCCTTGATGTACTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598 1 1 2 80 2R 5048394 5048415 AGTGATATTCCACTACAACGAG 57 5048267 5048355 GTCTCAATGGCATTGATTTCC 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0088605,FBtr0302602 3 4 10 80 2R 5143378 5143399 GCTTGTGTCGAAAGTATTCTCC 59 5143200 5143339 CAACTGTGGTATAACCTGCTG 59 NA Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 1 1 1 109 2R 5287500 5287518 CGTTCTGGGCGTATTTCTG 59 5287330 5287348 CTGTTAGCGGAAACATCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 2 2 2 80 2R 5471132 5471151 GCTAAAGAACCAACCCAGAG 58 5471016 5471091 CCAGGATCTGTAAGGATTTCC 57 NA Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 2 2 2 125 2R 5592560 5592655 GTCTTTAAAGATCACATACGACCC 59 5592739 5592757 GGCATAGCGTAGACTCTCC 59 NA Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 1 2 2 84 2R 5763389 5763409 ACGATTATAAGCTGGATCCCA 58 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0088416,FBtr0088419 2 2 10 82 2R 5994291 5994978 TTAGCTAAACAGGCGTTCG 58 5995024 5995042 ATGATGAGTGTCGAGTCCT 57 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993884 5993903 TGGCCCTTAACTTCTCAGTC 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993884 5993903 TGGCCCTTAACTTCTCAGTC 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088421 2 1 3 105 2R 6000580 6000599 ACTACATCGCATCATCGAGG 59 6000666 6001640 GGCTAAGTAACCGCAATGAC 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 1 2 3 125 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322250 6322271 TCTTCAGTCATTAGGTTCTCCT 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089365 1 1 26 115 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6375919 6419549 TCCACGGTAATCACTTGGG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089355 3 1 26 88 2R 6389923 6389941 GAGTCCAGGATTCGAGTCC 59 6389555 6389872 GTTAGTTTGTCTGAGGGCTC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 3 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 3 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 shn FBgn0003396 FBtr0088101 1 1 4 89 2R 7062302 7077855 GTCGAGGCAAATCTACTGTG 58 7095755 7095773 GTGACGTATTTGCAGTGGG 59 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 1 4 4 270 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393725 7394162 GAACTCGTGCTTCAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 3 4 4 273 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394165 GTTGAACTCGTGCTTCAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 3 2 4 130 2R 7532454 7532917 TCCCAAACATTCCTAGGCG 59 7532259 7532362 TATTTGCATACCTGTGCACAG 59 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 2 4 4 80 2R 8192773 8192794 CTGACTGTAAACGATGAATGCA 59 8192620 8192732 ACTTTCGGCGGGAATACTC 59 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 3 2 2 103 2R 8378097 8378116 TACTGGAACCAAGGAGTCAC 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 CG33752 FBgn0053752 FBtr0091753 2 1 1 60 2R 8433561 8433581 CTTGTCCTTACAACGTAAGTG 57 8433655 8433676 GTCAAGACAAAGTCCTTTACCA 58 NA DesignNoJunction Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 1 2 8 94 2R 8561425 8563639 ATGCCAAGCTCAGTCAGAG 59 8560790 8560808 GGCGAACATGTCGAATAGC 59 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 3 4 4 136 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087858 2 1 3 162 2R 8648349 8648367 AAATCGTGCTAAGCGACAG 58 8647922 8647940 GCTATCACTGCCATCATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 3 5 12 80 2R 9310223 9326125 TCTCCTGAATACCTATGACGAG 58 9310164 9310184 AGGTTTATGATACGCCTCTCC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 3 5 12 92 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9303452 9306500 TTTCCGTGAATGAAGATCGC 59 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 1 5 5 149 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 2 5 5 82 2R 9436513 9436532 TTATGGTGACTCCCATCTGC 59 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 2 3 15 80 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769988 9770009 GTAACCCATTTCAACAGATCGT 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 1 10 15 149 2R 9752989 9753574 ACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582 1 1 3 83 2R 10039423 10040360 CAGCGAGAGTTCCAGTACC 59 10039358 10039377 GGCGTATCTCGCATATAGCT 59 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 2 4 4 97 2R 10060020 10060099 TGCTGAAGTGTGCTTTCCT 59 10060160 10060178 TTTCAGGAAGTAGGGTCGC 59 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 2 3 3 158 2R 10116658 10116676 CTTCGGTATCTGCATTGCC 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 1 4 4 107 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026094 11026112 GATTACATTGGCCTGGGTG 58 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113083 3 1 5 63 2R 11443478 11443496 ATTACAGGCCTAGATCGGA 57 11449322 11449341 TGTGCGTTGAATACATTACG 57 NA DesignNoJunction Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 3 3 5 137 2R 11773781 11773800 TGACCGTGATATACGAGACG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 1 2 5 80 2R 11773649 11773669 AACTGACAATCAGATCCACAC 58 11773147 11773608 TTGTTGTTTAGGCGTAGTCG 58 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 1 4 5 84 2R 11826749 11827422 CTTATGAACAACCACATGAACC 58 11826686 11826705 GCATAAAGCTGTTCATCAGG 57 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 2 2 13 102 2R 11856645 11856664 TCGAAACTAGCTGTCTTGTG 58 11854017 11856583 TCACGTAGATGGTAGTACTCTC 58 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087256 1 1 3 160 2R 11973116 11973560 TTAGCTCTAAGGAAGGAGGAG 58 11972902 11972920 GGTGGAGACAAAGTTGCTG 59 NA Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 1 2 2 109 2R 11997154 11997175 CTATAAGATTGTCATCCTGGGC 58 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 1 3 5 80 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 2 1 1 82 2R 12665988 12666006 CAATGTGCGACGTTAACGA 59 12666106 12666125 TATGTTACCCAGACCAAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 2 2 3 129 2R 12922400 12922421 CAGGAGAAACTAAATCTGGAGC 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 3 1 2 77 2R 13345339 13345357 TAAGAGATCCACCGATCGA 57 13349519 13349537 TGGCTCTTAGGTATTCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 2 3 3 135 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592683 13593865 TCTCGTTCAAATTCTGCTCG 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0300540 3 3 7 139 2R 13726719 13726830 TGGAGAAGAGCTTCTACGG 58 13726933 13727105 CTTATCGGTCTGCATGTCG 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 1 6 6 81 2R 14304951 14304969 TCTCCTCGATCATGGAGGA 59 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 2 2 4 105 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528688 14528972 CAATCTTGTATCAGCACCCA 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944 2 1 4 81 2R 14645588 14645606 GAAATCTTCGCCAGGACAC 58 14645472 14645543 GAGACAGAATACTGCAGCG 58 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 2 4 5 95 2R 15024322 15024463 TCGACCAGAACGATAAGGA 57 15024245 15024263 GAAGGCATTTAACGCATGG 57 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086584 1 1 6 90 2R 15043338 15043358 AGTTACCCAAGGCTACTAGTC 58 15043408 15046247 CTCTGCTCAAACATCTGATCC 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 1 8 12 83 2R 15064179 15064197 TTAGTCACAAGCAGTGCCA 59 15064243 15064808 CCGGAAATGACGTTAGTTCC 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086508 2 1 4 143 2R 15124558 15124852 AGAAGGAGAAGTCGAGCAC 59 15125669 15125687 TCTCACGCAACTTAGCCTC 59 NA Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 1 1 1 78 2R 15137554 15137572 TCTGCTAATAGCCACCGTG 59 15137818 15137836 GTCGACTTTGTAACGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 1 7 10 80 2R 15295681 15295699 CGTCACAGACGATGAACTC 58 15295551 15295639 GTGTCGGTATATTCACCATGC 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 1 4 6 90 2R 15319744 15319818 AAGAATTGCTACGGCAGAG 57 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 3 5 19 97 2R 15361384 15361402 ACAAGTGGCATCATTCCAC 58 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 1 2 2 90 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198935 16198953 GATCAGACTAATCCGGCCC 59 NA InUTR Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 2 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485963 16485984 TCTATATCCGCCGATATTTGGA 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 1 4 15 147 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350 1 1 4 106 2R 17213145 17213705 GCAACAAGGTCACATACCC 58 17213772 17213793 CCAAAGGTACAGAAGGATTTCC 59 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 3 2 2 86 2R 17443998 17444016 GATCAGTGCCTTACCTGCA 59 17444064 17444154 GTCAAACTTGTAGGCATTGGA 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 1 3 4 80 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 1 3 3 84 2R 18764362 18764449 CAGGAATAAGTCAGTGAATCGC 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 3 3 13 84 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817834 18819047 TGGATTTGTCCTCATTGCG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 1 4 4 80 2R 19801153 19801171 CAGCACAGTCTACTTGTCC 57 19801215 19801292 GACTGACCGAATTTGTCCC 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 2 2 4 109 2R 19833769 19833974 AAATACCAAACGCCAAGTGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 1 3 3 80 2R 20308342 20308873 GAGCGGAACTATACATTGGAG 58 20308282 20308300 TACCGTAGAGGTCAGTTGC 58 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 1 4 4 177 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 1 3 4 86 2R 10510264 10510466 GACATAAGATTCGAAAGGATACGTC 59 10510694 10510712 AACAGAAAGTGGCACAGGT 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 3 2 3 86 3L 147325 147343 AGCCAAGATCATCGATGTG 57 147393 147465 AATTCACGGTAGCGTTCTG 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 2 5 6 82 3L 352341 352362 GTATCTCGAGTTATCCGAAAGG 58 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 1 5 6 81 3L 352342 352363 TATCTCGAGTTATCCGAAAGGG 59 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571,FBtr0301819,FBtr0072570,FBtr0301820 3 4 4 80 3L 344411 344429 GGACATTCAGAACTTTGCG 57 344284 344369 CGTAGGAAGAAGGTGTAAGTC 57 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 3 3 3 80 3L 1539121 1539208 GAATCTGTATAGATGTCTTCCTCGA 59 1539241 1539264 ACCTCGTAGAGTATGTTGTATACG 59 NA Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 3 2 2 264 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562748 1562766 CAAGAAGGTGTTTAGGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 2 2 4 108 3L 1881208 1881227 TATTTGCTCATCTTCACGGC 58 1878550 1881139 CATTAAAGGCCTCGAATCCTC 58 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 3 4 4 281 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253423 2253441 TGGCGATCCTGTAGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 2 2 2 60 3L 2389923 2389942 GTTCATCGATCGCACATTCC 59 2389822 2389903 CTTTGGCTTGATAGTAGGTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302679 3 1 12 176 3L 2465568 2465979 AGCCAGATGGATTCCTAGTC 58 2466116 2466136 GCTGAAGAAGCTTGTATAGGG 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 1 2 5 147 3L 2558030 2560128 ATCCAGTGAGGAGAAGCAG 58 2557901 2557919 ATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 4 5 116 3L 2604269 2607701 AACCATCAGAAACAACGTGG 59 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 1 3 3 80 3L 3119960 3120042 CTTGATCAATTAACCCACGC 57 3119899 3119920 CATTTCTGCCAAGGAATTACTC 57 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 3 2 2 107 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183797 3183948 GTTATCCAGCAAATCCCGC 59 NA Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 2 2 2 90 3L 3372839 3372978 ACGAGAGTGGTAAATTTGCAG 59 3372769 3372787 ATACTAGGCGGCAATACCC 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303 1 1 6 80 3L 4095139 4095212 GCCCATAAATAGGCTGAATCG 59 4095079 4095098 AACTCCTTCACCAAACACAG 58 NA Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 3 2 2 87 3L 4291810 4291891 CAGTGAAGGGAGAACATATTTCTG 59 4291746 4291764 ATTAGGAAGCCCACAAGCA 59 NA Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301095,FBtr0301098,FBtr0301097,FBtr0301096 1 4 4 80 3L 4580096 4580114 CTGCATTGACTCCTATGCC 58 4580156 4586596 CTATCCTTTGTGAGAACCTCC 57 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 3 2 2 80 3L 4861671 4861749 AGAAGATATCTCACATGCAGAC 57 4861789 4861808 TATCCAAATCGTATCGGTGG 57 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 3 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 1 2 2 67 3L 5788652 5788670 AGGATTTGTCCAAACAGCA 57 5788198 5788216 CAGATTCTCGTACGTCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091475 2 2 4 187 3L 5920166 5921341 GGTCACCTTTGTCGATTCC 58 5921731 5921813 TGGTTTGGATCTTGTACGTC 58 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076 1 1 3 82 3L 5925413 5925638 TTTCTTCGACCCAGTTTCG 58 5925349 5925368 GTTGTTATTAGTCAGGGCCT 57 NA InUTR Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076 3 1 3 116 3L 5925710 5925728 GTGACCTCGCTAATAGCCA 59 5925405 5925630 TTTGTCACCGAAACTGGGT 59 NA InUTR Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 2 2 3 84 3L 6093789 6093807 AAGCAGAGTGTGGAGAAGG 59 6093854 6094045 AGTAGATGTCGCTAAAGGCA 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301108 2 1 11 172 3L 7042048 7043274 TTCTCAATACGCCAACGTG 58 7043785 7044351 ATTCTGTACCCTGGATGAGAG 58 NA Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 3 2 2 70 3L 7125769 7126228 GTTTCCGAGCAATTCAACG 58 7126262 7126280 AACTCGTCATCACTGGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 1 2 2 80 3L 7138620 7138700 GGAAATGGAGACGATTCCG 58 7138558 7138578 CAACACATTGTCCATCATCAG 57 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0076839 1 1 2 85 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324321 7324400 CAGTCTTTACTTCGTCGCTG 59 NA Nonspecific Drosophila melanogaster 61 pst FBgn0035770 FBtr0273398 2 1 2 83 3L 7352692 7352786 GGCAGCAACGAAAGTATACC 59 7352628 7352646 GATTGACGTCCGTTTCGTC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0076785 2 2 3 199 3L 7761741 7761819 AATCATAATGAGGCCACCGA 59 7760182 7761579 AAATCTTGCGGCAGATAGC 58 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 1 2 4 80 3L 7926883 7928489 ATGTCGGAGAAGAATGAACAG 58 7926287 7926306 GATCATCCGCTCAAATTCCT 58 NA Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 2 2 2 80 3L 8343181 8343259 TCCTTCATATGCCTGAGGAG 58 8343301 8343320 CTTTGTAGAGATCACGGAGC 58 NA Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 2 1 1 73 3L 8409711 8409732 CGCCAAGACTTATAACAATGAG 57 8409598 8409616 CAATGTGGGCCAGATTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 1 2 4 80 3L 8463408 8463431 CCAAATATGCTTATACCTAGGGAG 58 8463466 8463539 CTGTAAATACTGTAGTTGGTCGG 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 1 4 5 108 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586649 8586667 GTAAGTCGATGTCCATGGG 57 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 3 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727350 TGGACAAGTTCTTGACTTCGA 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087 3 1 5 80 3L 8747586 8752550 CCGCAGTTATTATGGAACCTC 58 8752592 8752610 AACGATGGTCTGTAGGAGC 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 3 7 7 80 3L 8900033 8900178 GTTTACGTGATAGGATGGTGC 59 8899973 8899991 CGCATCTCCTGCAAATGAG 59 NA InUTR Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526 2 2 5 108 3L 9078841 9078859 CAGTTTATCCCAACGCGAG 59 9078927 9079007 GGTGTCGTGAATAATGTTAGTCG 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534 2 1 3 87 3L 9151173 9154376 GAAATCGAAAGCTTCGGCT 58 9151104 9151122 AAACCTCACTCGAGACACC 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076536 1 1 3 90 3L 9156062 9161908 GTTCTAATGGACTTCACATTGG 57 9155993 9156011 GTGTTTCTACACCAGGTCG 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089491 3 1 6 99 3L 9338146 9338164 TTCGGAAAGACGTTGAACC 58 9340742 9340760 CACCACCAATGTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607,FBtr0299606 1 2 3 83 3L 9730246 9730265 CAAGGAGCTAATCAGCATGG 58 9728381 9730038 GGCTTACTTCTGGACAAACC 58 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076352,FBtr0076350,FBtr0076348 1 3 5 252 3L 9966070 9966088 TGTTAGTATCGTCGCAGCA 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 2 3 3 87 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188019 10188039 GATGTCATCGCCGATAATGTC 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420 1 1 5 82 3L 10580769 10580787 TCCAAATCTACGCTTCCAG 57 10580986 10582465 GAGCAGTGGCATTTAATATGG 57 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 2 2 3 118 3L 10681693 10681793 TAGAGCTTTGGGACAAGGAC 59 10681874 10682037 TATTGTTGAAGGCTGCCAC 58 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 3 4 4 115 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865345 10865363 GGCTTGATATCCGGATTGG 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 3 2 4 115 3L 11872449 11872469 TGTTCAAAGTCCAAAGCTGAC 59 11872545 11872618 AACACATGAGCAATGGATCG 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 3 4 6 119 3L 12205860 12206204 TTCTACGACGAGTCCAATCC 59 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 2 4 6 119 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205759 12205777 GGACAAGATCGTAACTGGG 57 NA Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075914 3 1 2 125 3L 12731687 12731705 TGGAGCCGTATTACTTGGT 58 12731791 12731883 AACAATGCCCTCAAAGAATCTC 59 NA Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 2 2 2 60 3L 13000064 13000083 ACATTCGTTACCCTTTCGGA 59 13000103 13000124 ATTCGATCTAGTTGCTTCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 2 5 5 120 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475544 CTGAATGCATTTGATAGCCTCC 59 NA Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0075812 3 1 2 151 3L 13499657 13499745 ATGTGCCAATACTGCAAACG 59 13499859 13499877 AGGATTCGGATGTATGGCC 59 NA Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654 1 1 2 82 3L 15124313 15124381 CAAGACCGGTGAATGTTCC 58 15124249 15124270 TCTTTATGTAGATCCGTTGGTG 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 2 4 4 61 3L 15486594 15486614 GATCAGTTTGTACTAACGCCT 58 15486415 15486571 TCCATGATGGACATGCCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543 2 1 3 100 3L 15806416 15806437 ATTATTCTGTGCTTTGGACTGG 59 15805333 15806358 ATATGCTTGTTCTTGCCTAACG 59 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 1 2 2 80 3L 16392188 16392277 GAGTCCGAAGTTACAGAACTC 58 16392128 16392147 GATTCTCATCCGGGAAATCG 58 NA Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 3 2 2 91 3L 16710866 16710884 AGTTGGATGGCCTCTTTCC 59 16710938 16711138 GTTCTGTTGCGGATTTCCTG 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 1 2 2 68 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854420 16854439 TGCATGTAAACTGTGAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 2 3 12 162 3L 16895015 16895037 GGAGGAAATCGAACTAGAAAGAC 59 16895158 16895237 TTCTTTGTCCAACTGCTCCT 59 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 3 4 4 92 3L 17008152 17008170 AAAGCCGAACTGGATACCT 58 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0100596,FBtr0091474,FBtr0301554 1 3 3 80 3L 17035254 17035274 CAAAGTTCGAGTTCCTCTACG 58 17035132 17035213 GCTTTAGCAGAGCTTGTTCC 59 NA Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 1 4 4 80 3L 18824238 18824261 GGAGTACTGTAATCTACACAAACG 59 18824117 18824199 CCAAAGTGTAATCTGCGGG 58 NA Drosophila melanogaster 61 CG15881 FBgn0036909 FBtr0074879,FBtr0074880 2 2 2 80 3L 19799485 19799505 GTCAAGTGAACAGTGAAAGCA 59 19799547 19799622 GTATGCTTTCTTGCCTGGC 59 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 2 2 3 111 3L 19881569 19881649 CTGAAGCCGAATAACGACG 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074900 2 1 2 186 3L 19987826 19987917 GGGATTTAAGCAAGATTGCC 57 19988485 19988506 GCTTGAAGTTACATCTATTGCG 58 NA Drosophila melanogaster 61 kug FBgn0261574 FBtr0074906,FBtr0100509 1 2 2 80 3L 20005285 20005305 GAACTCCAAGATCACGTACTC 58 20005345 20005423 GAAGTTATTGAACCTTGGTCG 57 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 3 2 2 100 3L 20783889 20783908 TCATATCCAATCTCACAGCC 57 20783742 20783826 CATGCACTGGATCTGATCC 58 NA Drosophila melanogaster 61 CG11456 FBgn0037031 FBtr0078264,FBtr0300873 2 2 2 83 3L 20835435 20835506 CAACATGTTAGAGCCGTGC 59 20835553 20835571 CAACTACAGTGGAGCTCCA 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 2 4 4 83 3L 20959607 20959684 TTATTGATGATGCCGTCGAG 58 20959543 20959564 CACAAGCCAAGTAACTATTCCA 58 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 3 5 5 127 3L 21191818 21191988 AACATATGAGGGAGCACGG 59 21191709 21191727 TATGTCCACGCTATCCTCG 58 NA Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 1 3 3 80 3L 21414147 21414218 GGTTATCTATGATCGCCATCC 58 21414087 21414106 ATTTGAATGACGAGGTCAGC 58 NA Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 1 2 2 91 3L 21504343 21504421 CTGATATGGATCGAAGCTGTG 58 21504474 21504492 AGAAATCCGACGAACAGGA 58 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0111017,FBtr0301364 1 2 5 154 3L 21914420 21915691 AATATGAGTGTTGAGCTGCAG 58 21915807 21915825 GTGATAGCTCCGTTTGTGG 58 NA Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509 3 1 2 123 3L 22297622 22300657 CAATAATGGAGGAGCCCGA 59 22297517 22297536 CATGTTCCAGTAGCTGTACG 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 3 5 5 119 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776610 22776628 AATACGCTCACGTTGTTGG 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 2 3 3 81 3L 22885585 22885672 AATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0299882,FBtr0299880 1 3 4 80 3L 23642459 23682591 CAGCTTGTTGTATGTACGCTC 59 23682633 23682651 CAGAAAGTGCTTCAGCCAC 59 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 3 4 4 90 3R 293416 293435 TTTCTACTACATGATCGCCG 57 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 3 2 2 141 3R 1064105 1064184 TGCTTACAAGGCCATTAAGGA 59 1063984 1064002 ATTTCCCTTCGGCAGATCC 59 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 1 3 3 85 3R 1205150 1205228 GGACCAACTAATAGATAAGCATGC 59 1205088 1205106 AGTCATTGTCGTAGTCGCC 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 2 3 4 96 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385832 1385850 TACCCTGGTAAATGCGCTC 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 2 4 4 80 3R 1401030 1401048 GCATTCTGTGCAAAGAGCT 59 1401086 1401170 CTGAGTCATTCAACTGATAAAGTCC 59 NA Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 2 2 2 91 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418645 1418664 GGACTGATTCTTGGTGACCT 59 NA Drosophila melanogaster 61 CG2100 FBgn0037369 FBtr0301574,FBtr0078724 1 2 2 80 3R 1560929 1560947 CAAACGCCTGAAGCTATCC 59 1560806 1560886 TACTGTGAGCCAACCTTCTC 59 NA Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 1 1 1 97 3R 1628932 1628950 TTCATGCAGCAATCACAGC 59 1631967 1631985 TAGCGCAGTAGATAGCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 2 4 4 134 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644079 1644097 ATATCTTGCGTTTGGTGGT 57 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 1 5 5 85 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0078650,FBtr0301947,FBtr0078652 2 3 9 129 3R 1833859 1833878 ACCAGATTCAGACGACTACG 59 1830839 1833767 GTGTGGTGCCATTACTCCT 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 1 4 4 80 3R 2182251 2182269 TGGTTCGACAACACTACCA 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 3 5 5 125 3R 2217058 2217076 GATCCAATGCACCAAGGAG 58 2216805 2216890 TCAAAGACAGCCTTGATGC 58 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081673 3 1 3 189 3R 2313034 2315355 AAAGTCGGCCAAATTGGAC 59 2315950 2315968 GTTTAGCCTATCGCACTCG 58 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 3 2 4 180 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118149 3120141 CCAGAAAGTGACCTTTCTGC 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 2 3 4 89 3R 3586916 3586934 CAACACGCAAAGTAGTTGG 57 3586987 3587737 TCCTACAACTTCCTTGTGC 57 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 1 2 2 131 3R 4445732 4446035 TACTCCAAGAATCACGCCT 58 4446130 4446148 GGTCAGGCAATATGTCAGC 58 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0300544 1 1 3 87 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542280 4542631 TGATACCTGCTCTTCCACTG 59 NA InUTR Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112823 2 1 8 81 3R 4663428 4664127 TGTCCGAGTCTAAGTTCCC 58 4663365 4663384 CAACAAGCTAACTTGCATGG 58 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 3 5 5 228 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847651 4847669 TCGATGGGATTCTCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 2 2 2 80 3R 5068876 5068894 CACGTGTTCGTAGTCAGAC 58 5068759 5068835 GTCTAAAGAGATTACGCAAGGT 58 NA Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091947,FBtr0091946 3 2 2 224 3R 5181367 5181391 GATGAGTTTACTATCCTGATGATCC 58 5182293 5182311 CTTATGTTGCTGCTTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 2 2 2 96 3R 5320656 5320736 GTGGAGGAGAATCCTCACAC 59 5320795 5320813 TTGTATCGACCTCCTCCGA 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 1 4 4 93 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 1 5 5 80 3R 6041341 6042794 GGTGGATGAGATATCCGAGC 59 6042836 6042855 TACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0082238 1 1 2 80 3R 6191845 6197884 CATTACCGTGACGGTTTCG 59 6191783 6191802 CTTGAGTTGCTGTGGTACAG 58 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 1 3 8 105 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 2 7 7 98 3R 6692601 6692620 TTACGGTGAACAAGGAGGAG 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 3 2 2 87 3R 7414839 7414857 CATAAGTTCACGCACCTGC 59 7414716 7414792 GATGAACCATAAGATCTTGCCTG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744 2 2 3 80 3R 9135607 9135625 GGATCGCTTGTAGATCGGA 59 9135668 9135877 AATGATTGATCTGGAGCGGT 59 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082742 2 1 3 165 3R 9130062 9130080 TCAACTTGGATGAGTCCCG 59 9130203 9135876 ATGATTGATCTATCTACTCCATCGG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 2 8 8 82 3R 9487884 9487905 AATTCGAAGACTATCGTGATGC 59 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 3 3 5 82 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522054 9522555 TGTCGTAGTTTGTATCTATCCG 57 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 2 2 3 80 3R 10225503 10233887 GCTATTTAGCAGAAATCGAAGC 58 10225444 10225463 CGTACATCTGTGCATATTGC 57 NA Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 3 2 2 160 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098564 11098582 GGTTGTTGACAGACCTCCA 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 3 2 9 81 3R 12121527 12122391 GATAGCTATACAATTACTCCACCG 58 12122428 12122449 AAAGTTCTCTGGTTTCACATCC 59 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 3 3 3 110 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636025 12636043 CTGGAAGCGAGTGTAGGTC 59 NA Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 3 1 1 73 3R 13508808 13508826 TATAGCCTGACGTCATCGC 59 13508921 13508940 CACAGAACAATCGACTGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083568 1 1 4 82 3R 14073859 14073946 ATATGCAGGCAGAAGACCC 59 14073992 14074010 TTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 2 5 6 80 3R 14229547 14229625 GATGAGTTCCTCATTGCCG 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 3 2 4 125 3R 14844197 14846661 GTGAAGAAGGGTATCAACGT 57 14846749 14846767 GCAGTGTCCAATAGATGGG 58 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 3 2 2 80 3R 15708481 15708568 GATGACGCTAATATCGAGTACG 58 15708608 15708627 GGTGCCATAAGTACCTTTGC 59 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083856 2 1 2 145 3R 15727518 15728566 AAGGGTAAGTGCTCTGGTC 59 15727391 15727409 GGCTCCAGTCTCATCAGTC 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 3 6 8 123 3R 16575963 16575982 ATACAGTGCGAACTTTGCTG 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256,FBtr0083960,FBtr0083963,FBtr0083958,FBtr0083961 3 5 8 87 3R 16624124 16631682 TGAATACGTAGTCGGTAAACGT 59 16631730 16631748 TCCTATTAAACCGCTCGGG 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083962,FBtr0113255,FBtr0083959 1 3 8 178 3R 16625853 16625871 ATGATTACCCGAACGGTGG 59 16626013 16628020 ACCAACTCCCATAAGGCTC 59 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 2 2 3 168 3R 17105828 17105846 AGGAGGAGTTCGAGATCCT 59 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084064 1 1 22 80 3R 17200833 17200851 CAGTCCCAGAACTACAGTG 57 17189596 17200790 TTTGATCTTGACTTGAGCCT 57 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084062 1 1 22 80 3R 17190489 17190507 GTAAAGACAAGCTGGTGCG 59 17190359 17190447 ACACATGGGTTATGATGTCCT 59 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084168 3 1 2 97 3R 17597551 17597631 CACCACAGAAGTTACCGAG 57 17597472 17597490 CCATCACTGTAGACTGCAC 58 NA Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0290271 2 1 2 80 3R 17847984 17848136 CATCACCTACGCCAAATACG 59 17847923 17847941 ACCTTGATGACGGATCCTG 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 1 2 5 118 3R 17897750 17900175 TGCTGATCATAGCGTAGGC 59 17900256 17900275 GTATCTCAATGAAACCCGCC 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 1 2 3 80 3R 17957953 17958383 TGCCTGACCAATCTATTTGAG 58 17958425 17958443 GGTTATCTCACGCAGATCC 57 NA Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 1 2 2 87 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128542 18128560 ATACACAATGATGGGCAGG 57 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 2 2 3 101 3R 18372500 18372519 AGTACGACGATGAGTTGGTC 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0084303 2 1 2 119 3R 18520901 18521215 GGGCATCACCTTTATAGCG 58 18521297 18521316 CTATCCGATCCATTGACGAC 58 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 1 4 5 80 3R 19802106 19802127 AAATCGGATAAATCGGAGAAGG 58 19802162 19802242 GAACACCTTGATCATCTCTATATCC 58 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 1 4 4 88 3R 20172700 20172812 AGAACTACAACTCGACGGG 59 20172630 20172648 AGTCGAGCCATACTGTTGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 3 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527819 TGGTGTTCATCTAAGTCATCGA 59 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084700 2 1 3 80 3R 20644400 20644419 TCCGGTGATAAGAAGGACTC 58 20644561 20645461 TGTCGATTTCTCTTTATCGTCC 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 1 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 3 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 2 3 3 92 3R 21133345 21133423 ATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 3 3 3 93 3R 21133345 21133424 TATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 1 3 3 95 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717748 21718180 CTTCGTTGCAATGTCTCGG 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 3 4 5 132 3R 21870339 21871200 GATCATTGGGCAACAGATCC 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 3 2 2 82 3R 21882158 21882176 AAATCGATGTCAGCGATGG 58 21882034 21882112 TTCCAGAACCTTCTGAGCT 58 NA Nonspecific Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 2 5 5 80 3R 22809871 22809890 CCCAGTATGCCTATGGAAGG 59 22809931 22810009 ACTTAAAGATTTGGCTCTCGC 59 NA Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 1 2 2 109 3R 23094416 23094502 TTCTGGCACCACATTTCTG 58 23094325 23094343 TTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273192 2 1 2 113 3R 23143037 23143169 TGTGCAGGAGTTTATTCGT 57 23142942 23142960 CTTATTCTCATCGCCTCCC 57 NA Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 2 2 2 81 3R 23536243 23536339 ATTATACAGGAGAGCGAGGC 59 23536380 23536401 TGCGCAGATAATACTTGATGAG 58 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 1 4 4 87 3R 24700981 24711987 CTGACACATGCCATACCCA 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 1 2 4 85 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698013 24698249 TCAACTTCAACCTGCAGGT 59 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 1 1 1 153 3R 26038011 26038029 ATTGGACAATCGGAAGCTG 58 26038202 26038222 ATAGTCATCGTGGTTAACCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 2 2 4 106 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26275585 26275603 TGGTCATATAGTGCTCGCC 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 2 10 12 114 3R 26398692 26398710 CTGGTGGAGAAGAACTCGT 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 3 6 12 140 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397643 26397663 CCAGTATGGTTATCTCCTCGG 59 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 3 3 3 81 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028839 AGAGTGTAGTAGTGCTTTCCAC 59 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773 2 1 3 152 3R 27044762 27044841 TTGATACAATAGCCGTGCG 58 27043630 27043648 TCAATGGTCGCAAGTACTG 57 NA InUTR Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 3 2 2 83 3R 27166296 27177001 AGATCAAGGATGATTTGCCC 58 27177047 27177065 TGCCGAAGTATGAGGTCTC 58 NA Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 2 2 2 80 3R 27386445 27386465 GGTTTACCAGGACATCAACAC 59 27386505 27386591 TAGTCGTAAGAGTGGCATCTG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 1 6 6 84 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250 3 1 4 201 3R 5377361 5377381 GTAACGTACGAATGTAGTGGA 57 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 2 1 1 60 3R 15212527 15212545 AGTCATTGGTTCTCTGGTG 57 15212650 15212670 TGAGGTAGGAAGTAAACGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 1 2 6 97 4 350954 363555 AAACACAAGTAATAGGCGGC 59 350034 350052 GAATGCGTTTACCACTCGT 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 3 2 6 99 4 350956 363557 GCAAACACAAGTAATAGGCG 57 350034 350052 GAATGCGTTTACCACTCGT 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 2 2 6 98 4 978509 978643 GATTAGTGCCAGGTACTCG 57 978429 978447 GTCTGCAATTCAAGTCGTG 57 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 2 2 4 195 4 1207177 1207197 TCTTTCGGAAATGGATTACCC 58 1208238 1208379 CCTTCTCAGGTATTGTAGATCG 57 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0114112 1 1 4 82 U 1352559 1352577 CGTGGTACGACGTATTGGT 59 1352623 1352741 TAATCCGCCCAATCTACCG 59 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200 2 1 3 90 X 31137 33029 CAATTCGCAAGGTTTGTGG 58 33080 33101 CATTCCACGTAGATAGTCTCAC 58 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 3 4 4 113 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522615 522633 ATCCTTGGACACCTTCAGC 59 NA Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 3 2 2 163 X 787631 787649 GGAACTCGACTACCACGAC 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 1 1 1 86 X 1065713 1065731 AACACGAACGTTAGCATCG 59 1065898 1065916 GTAGAAGGTTGCGTTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0300428,FBtr0300430,FBtr0070261,FBtr0300427 3 5 9 94 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1541414 1541432 AATGACGCCACTGAGTAGG 59 NA Drosophila melanogaster 61 csw FBgn0000382 FBtr0070379 2 1 3 95 X 1997799 2002424 ATGGTTACACATGGTTTCATGG 59 2002480 2002498 ATTCACGGACGAGAAACGA 59 NA Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 3 3 3 80 X 2003625 2003771 TATTGCCATACGACCACAC 57 2003814 2003833 AGTTGGCATTGATGTACTCG 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 3 4 8 81 X 2386428 2386447 ATAGTAATGATCGCAGACCG 57 2384863 2386384 CCAACGTCGTTATTCTCCT 57 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 1 4 8 80 X 2384863 2386386 CAAGGAGAATAACGACGTTGG 59 2384803 2384821 ATACATTCGCCGTTCATGC 59 NA Drosophila melanogaster 61 crm FBgn0000376 FBtr0070495,FBtr0070496 3 2 2 80 X 2629130 2629222 CAGGGATATACTGGATCCGTC 59 2629070 2629088 ATTTCCTGGAACTTGTGCC 58 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570 1 1 3 126 X 3408361 3408432 CCGTCAAATTGCACATCTG 57 3409314 3409332 GATCCGTCAAGTTGGACAG 58 NA InUTR Drosophila melanogaster 61 rg FBgn0086911 FBtr0290088 3 1 5 81 X 5123365 5123385 GGGATCATTCCTGAATCTGAC 58 5123427 5127453 ACAGAACAACTGTTTGAGCA 58 NA Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 2 2 2 81 X 6132166 6132184 CAGATGACTATCAGGCGGT 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 3 2 2 117 X 6215017 6215856 AATGTATTCGAGCAGGTCG 57 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 2 2 2 68 X 6571712 6571730 CTATCCCTGGGACTATCCG 58 6571586 6571604 TACAGATCATGATCCGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 2 3 6 154 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680836 6681393 GACACGAAACTGTAGCTGAC 59 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0071125 1 1 3 83 X 7852512 7854043 TGAATAATCTGCCAGCCGA 59 7852447 7852465 CAGTGTCATCCTGGGATCC 59 NA Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 3 2 2 110 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328884 8328904 ATATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 1 4 6 116 X 9005031 9005127 GAGCATGGATTTAATCCAGCC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850 2 1 2 121 X 9467349 9467445 CTCATCCATCTCTACAGCGA 58 9467247 9467265 TCCAGAGCATAGAAGAGCG 59 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 3 2 2 94 X 9783065 9783083 CGCATATACGACACAAGCG 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112688 3 1 4 200 X 10413798 10469430 CATCATGGAACAAGTGAACCC 59 10413618 10413636 GTTGAGATTTGACTGGGCC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 3 4 15 137 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299406 11299430 GGATACTCTGATATAAGGTCATCGT 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112813 3 1 15 82 X 11296748 11296767 ATCTACAGGGTGGAGTTACC 58 11296812 11299316 TCCTCGGAAGGATAGTCAG 57 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 2 6 6 151 X 11688899 11688918 AAGTGCATTGACGTGTACAC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 2 2 2 134 X 11747533 11747551 AAAGATGACGTAGCGGAGG 59 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 1 2 2 80 X 11805152 11805171 ATCATCACGATAGTCTGCCG 59 11805036 11805109 GATCGGGTTCAGGATTGGA 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 2 2 10 88 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848307 11856054 GAGTTCGAATCATCGTGCC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 3 6 7 118 X 12168166 12168184 TGGCAATTGCCAGATAAGC 58 12168265 12170555 CTATGTGAAACCTGGATGGC 58 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 1 3 3 80 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346755 12346775 ATTAGCATTTCGTAGAGCAGC 58 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445 1 1 2 159 X 12502419 12502437 GATTCCAACGGTACCATCG 58 12502559 12502673 GTAGGAGTTCTTTAGCGTGC 58 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 3 1 1 99 X 12600719 12600737 TATCTTTGCCGTACTGCTG 57 12600934 12600953 CAAATAGCCCTCCGTTTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 sno FBgn0005410 FBtr0112848 3 1 4 93 X 13094934 13096788 TCTTTATTGGCGCAGATGAG 58 13094860 13094879 TCTGATTATTCCCGACTCCG 59 NA Drosophila melanogaster 61 mew FBgn0004456 FBtr0073731,FBtr0073732 1 2 2 80 X 13114117 13114137 TCAAGGAGGATCAATGGATGG 59 13113905 13114075 AGACGATTACCTTTCCGCC 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 1 5 5 116 X 13230405 13231548 AACAAATCCAGCCATGGTG 58 13230307 13230325 ATGATCACCTTGGAGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 2 5 10 82 X 13493487 13494114 TGAAGAGTACACCAGCTCC 58 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 2 2 2 90 X 13644349 13644367 TAAACAATGTGCCATCGCG 59 13640810 13640829 TAATCACGCATGGTGAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 1 4 4 80 X 13726825 13726846 TATCCAGATATGAGCCAATTCG 58 13726694 13726784 GCAGAAGGATTTCAATGGC 57 NA Drosophila melanogaster 61 Ste:CG33241 FBgn0053241 FBtr0300090 3 1 1 60 X 13949079 13949097 AGTGAACTGGCAACATGTC 58 13948980 13948998 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Ste:CG33238 FBgn0053238 FBtr0300087 3 1 1 60 X 13952886 13952904 TGAACTTGGCAACATGTCG 59 13952786 13952804 GAGGAACCAATCGATCCAG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 1 2 2 94 X 14087772 14088051 GAATTGGACTGCGACTACC 58 14088109 14088127 TTGCACATTAGTTCCGCTG 58 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 3 3 3 85 X 15219543 15219623 CGAGTCCGAGTATCATTCGA 59 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 1 2 5 89 X 15265708 15266192 GTCAGAATGGTGATATCTTCGC 59 15265640 15265658 CTTGGTGCTTCTGGATGTC 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 2 2 2 80 X 15875698 15875784 ACTGGAAGATATGCTACTCGG 59 15875638 15875656 GATGGTCCCATTGGGACTC 59 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 1 4 4 80 X 15896969 15896988 CCAAATACGGTGTTTCCCTG 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 1 3 3 80 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965138 15965156 CTTGCGATAGTTGATGGCG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 1 6 9 185 X 16270362 16270692 CAGTGGTATCTGAATGGCG 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 1 3 3 124 X 16281542 16281560 GATAATCATCGGCACGCTG 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280 3 1 3 88 X 16342748 16343913 TTATGAACACGCTAGCGGA 59 16343965 16343983 GCAAATTGCCGACAAATGC 59 NA Drosophila melanogaster 61 CG42512 FBgn0260238 FBtr0300651 3 1 1 78 X 16545540 16545559 GATATGTTGGAACAGCTCGA 57 16545656 16545674 TATCCTCCAGACGATCCAG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 3 2 4 86 X 16602743 16602762 TTATCCGTACGACAATACGC 58 16603312 16603422 GAGTAGGTCTGGAACATCG 57 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 1 3 5 80 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717633 CGATTTAGGCCAGTCACTG 58 NA Drosophila melanogaster 61 Rcp FBgn0030801 FBtr0074341 2 1 2 127 X 16778641 16778736 CGATCAATCCCACGTTCTC 58 16778826 16778908 ATACTGCAGTGCCTCATAGG 59 NA Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 1 2 2 113 X 16999009 16999523 AAGTTAAGTCGGAGGTGGA 58 16998914 16998932 TATAGAGCTCCTGCTGACC 58 NA Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 1 2 2 97 X 17320862 17320880 CTAACCCGTCTCTGTGAGC 59 17320940 17321461 ACAAAGCGGTATAGTCTGGG 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 3 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970 1 1 6 81 X 17784634 17784654 GATCAAAGTGGACGAGTTCAC 59 17784695 17791229 AGTACGAATCTGGGTGAATCC 59 NA Nonspecific Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 1 2 2 111 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362443 ATTGGCATACGCATCATCC 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 1 5 5 80 X 19457156 19457177 CATCTCCAAGTACCAAATGCTC 59 19457035 19457116 TCCTTCCAAATCTTGCACAG 58 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 3 2 4 80 X 19470777 19470798 CTCCCTACTTTAACATGAACGC 59 19470419 19470737 AGTCGTTCTTCGGAAGAGTC 59 NA Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 3 1 1 81 X 19600128 19600146 AACGATCCTCGTCTCAAGG 59 19600253 19600271 TCACTTGGTCATATTCGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 3 2 2 148 X 20118059 20118077 CAGTTCTTCCTCTGCACCA 59 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 1 3 3 83 X 20804407 20804427 CCAATTTGAGAATGGTCAGGA 58 20804254 20804272 AAATAACCGTTGGCAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299525,FBtr0299522,FBtr0299526 3 3 5 92 X 21905499 21905517 TTCTTTCGGAGAGCCAGTG 59 21905572 21906079 GCTCTGTTGGATATTGCTCC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640c FBgn0083024 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:60Ca FBgn0083060 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1936 FBgn0082993 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3253 FBgn0086075 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:84Fd FBgn0011962 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-G894 FBgn0086047 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Ppr-Y FBgn0046697 FBtr0113889 1 1 1 80 YHet 192003 192022 AGAAGACACAATTGCGACTC 58 192063 206137 TGTCGTTCCACTTCATTACTG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2876 FBgn0086671 FBtr0091623 1 1 1 60 X 17038905 17038929 CTAATATCCGTAGCGTCATAATGTG 59 17038869 17038888 TCTCTTCGTTTCATACGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070634,FBtr0070635 3 2 2 60 X 3755500 3755521 GAACGAAAGAGACAAATGAACC 58 3755461 3755480 GTCTTCTCGAAACGCAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1518 FBgn0031149 FBtr0077264 3 1 1 112 X 20923020 20923039 ACTAGATCCATCCTATGCCA 57 20922617 20922945 AGAGGAAGACCAGGATCTG 57 NA Drosophila melanogaster 61 NPC1b FBgn0031140 FBtr0077239 2 1 1 81 X 20807140 20807316 CGTCAATCAGACATATTTCACCC 59 20807352 20807375 CTTTAGGAAGTTATACTCGAAGGC 59 NA Drosophila melanogaster 61 Obp19a FBgn0031109 FBtr0077300 3 1 1 125 X 20286980 20286998 CCAAGTATCCGAAGGTCAG 57 20287087 20287180 TTCCCTTCTTGATTGCCTG 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089398,FBtr0089405,FBtr0089406,FBtr0089399,FBtr0089407,FBtr0089403,FBtr0089409,FBtr0089402,FBtr0089408,FBtr0089401,FBtr0089397,FBtr0089404 3 13 13 82 X 20106632 20106650 ATCAAGGACATGGAGGAGG 58 20106494 20106586 ATTTCGTCGAGATCCTTGC 58 NA Nonspecific Drosophila melanogaster 61 skpC FBgn0026175 FBtr0074797 2 1 1 60 X 19710477 19710495 TTCGAAATCATACTGGCCG 58 19710518 19710537 TGCAACAGAGATCCACTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14225 FBgn0031055 FBtr0074757 1 1 1 86 X 19568597 19568615 CAAAGTCTACTGGTTGCCG 58 19567495 19568549 ACTTTGGTTCCGTACCTAGTG 59 NA Drosophila melanogaster 61 CG14204 FBgn0031032 FBtr0074729 3 1 1 97 X 19479666 19479744 CCTGTGATGTTCAAGAATGGA 58 19479803 19479821 ATAGTACCGACCAACCAGG 58 NA Drosophila melanogaster 61 CG14199 FBgn0040890 FBtr0300214 2 1 1 128 X 19388864 19388945 TTGCTAAATCATGAGCGCC 59 19388679 19388772 ATGAATCCGGTCTTGTTGC 58 NA InUTR Drosophila melanogaster 61 CG7406 FBgn0030980 FBtr0074664 1 1 1 158 X 18971827 18971907 ACCGACAACAATATGAAGGT 57 18972028 18972046 GATGACCTTGACGATGGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7288 FBgn0030969 FBtr0074643 1 1 1 88 X 18753663 18753738 CTTTCCCATCAAGCACGTG 59 18753786 18753808 CCACCAGATTGTATTTCGTATCC 59 NA Drosophila melanogaster 61 CCKLR-17D1 FBgn0259231 FBtr0299681 3 1 1 90 X 18607452 18607470 ATTGTCAGTCCCTCGACAC 59 18603482 18607402 TGGCCGTAATCATAGTAGTACTG 59 NA Drosophila melanogaster 61 wgn FBgn0030941 FBtr0074617 3 1 1 77 X 18522834 18522852 ATCGACTGGGTTGTCTTGG 59 18522709 18522727 CTCGAAGTGCTCATACTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15040 FBgn0030940 FBtr0074618 1 1 1 158 X 18504975 18505046 TTCTTGCCAGCGAATACAC 58 18504776 18504796 GATGCAAAGGTATTCCGTCTG 59 NA Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 1 2 2 80 X 18392027 18392047 AAGGTCATCAGGAACAAGGAG 59 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 3 1 1 87 X 17778492 17778674 CAAGCCGAAACATTCAGGG 59 17778724 17778743 TATCCATGTTCGACTGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12994 FBgn0040877 FBtr0074438 3 1 1 86 X 17317030 17317116 ACTACTACAATGGACGCTCC 59 17316963 17316981 TCAGGAGCACTATGGTCAC 58 NA Drosophila melanogaster 61 CG12996 FBgn0030835 FBtr0299541 1 1 1 87 X 17144690 17144708 CACCAGAATCAACTGCAGC 59 17144758 17145085 AAATTCGAACTCTGATGGCC 58 NA Nonspecific Drosophila melanogaster 61 CG9104 FBgn0030800 FBtr0074348 1 1 1 80 X 16778141 16778159 AAGATCCGGTGCATCTTCC 59 16778017 16778101 TATGTAGTTATCAGGAACCTGGC 59 NA Drosophila melanogaster 61 CG12507 FBgn0030729 FBtr0290087 1 1 1 87 X 16159848 16160069 CTACGACAGATATGATGAGCAG 58 16159782 16159800 ATACGGATCGAAACGTTGC 58 NA Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 3 3 3 106 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802261 15802280 TCTTGCGTACTGATTTGCTC 58 NA Drosophila melanogaster 61 AlkB FBgn0065035 FBtr0074168 1 1 1 89 X 15753251 15753271 CGATGATTGTGTAGTCAAGGG 58 15753131 15753151 TGTAGGCTTTCTACATTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17209 FBgn0030687 FBtr0300811 3 1 1 80 X 15662006 15662093 AAATTGGATGTTCGGAACCA 58 15662135 15662154 GTCGATACACTTCTCGTAGC 58 NA Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 3 1 1 60 X 15627746 15627764 ATACACTGCAGTAAGCCAG 57 15627547 15627565 GAGGAATGCTATTCGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8134 FBgn0030671 FBtr0074054 2 1 1 95 X 15598430 15598634 GCTTCTTCAAACGCTTTGC 58 15598693 15598711 CATACTGCTGTATGCCCGA 59 NA Drosophila melanogaster 61 CG15643 FBgn0030654 FBtr0074072 2 1 1 63 X 15465609 15465628 TCATCTACGGATTCGGACAC 59 15465487 15465505 TACTCGTCATAGTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 2 4 4 108 X 15229292 15229393 ATTCCAGAATGCTGTCAACAG 59 15229463 15229481 CTCGTAGTGCTCCTTGTCC 59 NA Drosophila melanogaster 61 PPYR1 FBgn0030623 FBtr0074023 2 1 1 60 X 15138461 15138479 AGATCGACTTGCGTCAGAG 59 15138419 15138439 ACCTTTGGTAACTTCATCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15030 FBgn0030621 FBtr0074000 3 1 1 61 X 15109828 15109847 GATACGATTTGGAGTGCTCC 58 15109871 15109889 AATTCAGGAGCGGATCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14406 FBgn0030595 FBtr0073977 3 1 1 96 X 14804726 14804744 ATAACAGGAACGGCAACTG 58 14804342 14804667 CACTTAGATCCGATGGATCG 57 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 1 5 5 116 X 13230405 13231548 AACAAATCCAGCCATGGTG 58 13230307 13230325 ATGATCACCTTGGAGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1764 FBgn0030467 FBtr0073796 3 1 1 106 X 13190038 13190557 GATTGTGGCCAGAATCTCG 58 13189950 13189968 GACCAATGGTCCTCAGGAG 59 NA Nonspecific Drosophila melanogaster 61 CG32639 FBgn0052639 FBtr0073734 2 1 1 64 X 13130444 13130462 ATGATCTGACCAGCAACGA 59 13130398 13130416 CAATTCATCATCGGTGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15721 FBgn0030438 FBtr0073715 2 1 1 89 X 12864984 12865076 TAACTGGCATAAACTGGGAG 57 12865127 12865146 CTGGATTGTACTGATCCTGG 57 NA Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073686 3 1 2 97 X 12638894 12638913 ATTTCCTCAAGCCGGTACTC 59 12638972 12640910 GTCAACATCCTGAATGCTGG 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619,FBtr0073617,FBtr0073616 1 5 5 60 X 11606811 11606829 GATTTGGACGACGAAAGCC 59 11606367 11606386 CTGTCTCCGATTCTGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 3 2 2 101 X 11476640 11476658 CCTCTTCACTTGCACTTCG 58 11476498 11476576 TCGCCTAGTCTAATCAGCTG 59 NA Drosophila melanogaster 61 e(y)2 FBgn0000618 FBtr0073540 3 1 1 61 X 11470248 11470266 GATACGCACCATTCTCACG 58 11470205 11470223 GTTAGGATTCGTCCTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732,FBtr0073547,FBtr0300733 2 4 4 80 X 11329630 11329648 CAAATTCACCGAGCAAAGC 58 11329501 11329586 AGCATTTCCGAGTTCTTGG 58 NA Drosophila melanogaster 61 hop FBgn0004864 FBtr0073457 3 1 1 89 X 11258446 11258528 AGTGGTATCCAGATTCGATATCG 59 11258379 11258397 CATCCTTGACGGGACTCTG 59 NA Drosophila melanogaster 61 CG15207 FBgn0030248 FBtr0073384 1 1 1 60 X 10802796 10802814 ATCGTTAGCGTTACAGCAG 58 10802838 10802856 TGGGATGTGGGATGATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2111 FBgn0030223 FBtr0071492 2 1 1 82 X 10554370 10554446 GCAGAACATACGCAATTATTGC 59 10554485 10554507 GAGTGGACAGACATTCAATTAGC 59 NA Drosophila melanogaster 61 l(1)G0230 FBgn0028342 FBtr0071438 1 1 1 108 X 10107760 10107778 CTCGCGAAATACCAGTCAC 58 10108177 10108195 TCTATTCGGCAGCCTTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0112974,FBtr0071487 1 2 2 142 X 10106297 10106315 ATTTGTGCACGTCTCTGTG 58 10102315 10106193 CAGCCAAAGAATAGTCCTGTG 59 NA InUTR Drosophila melanogaster 61 CG15313 FBgn0030173 FBtr0071418 2 1 1 112 X 9943768 9943786 TATGACTTGGCATTGCCAG 58 9943862 9943936 TCAATTGACGGCTTACGGA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG32695 FBgn0052695 FBtr0071398 1 1 1 83 X 9767822 9767840 GAATGCTCCTTGATGTGCG 59 9767694 9767775 TTTAGACACGCCTTCTGCA 59 NA Drosophila melanogaster 61 btd FBgn0000233 FBtr0071379 3 1 1 157 X 9589296 9589314 CATCCTCCTCACCATCCTC 59 9589435 9589892 TGGAAACTGACTTCTCGCT 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 1 3 3 80 X 9566938 9566956 TGTTTACACCTGCAACCAC 58 9566814 9566897 ATACACAGATCGAAGTCATCAC 58 NA Drosophila melanogaster 61 Dsor1 FBgn0010269 FBtr0071313 1 1 1 83 X 9143720 9143809 CTCAAGACCCTGCTGAGTC 59 9143856 9143874 CATTGTCTTGCACACCCAG 59 NA Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071340 3 1 2 147 X 9090345 9090366 TCGTCTCTACTTTCAAATAGGC 58 9090143 9090238 TCATATGCTTCTTGGATGGC 58 NA InUTR Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 2 1 1 60 X 9001535 9001556 CTACGTGATTGATTCCAACGAC 59 9001574 9001713 CTTGTCAAATATCGCTTTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Corp FBgn0030028 FBtr0071179 2 1 1 88 X 8164893 8165207 TCATCTCCCAAGCCATGAC 59 8164823 8164842 CTCAAACACGTAGTCCTTGC 59 NA Drosophila melanogaster 61 GIIIspla2 FBgn0030013 FBtr0071159 2 1 1 87 X 8052408 8052604 TAAGAGACCTAGTTGGCCC 58 8052654 8052673 CGGTATGTTTGGTTAGCTCC 58 NA InUTR Drosophila melanogaster 61 Traf6 FBgn0026318 FBtr0071188 1 1 1 60 X 8050228 8050249 ATGCCAACAATCAAGTGTACTC 59 8050189 8050207 CAGAACTTGTAGCCATGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127 3 1 2 123 X 7849838 7849857 AGTGTTGTGGACCAATAAGG 57 7849598 7849616 TTCAACTCTGTCACCTGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3184 FBgn0029892 FBtr0070989 1 1 1 60 X 6581818 6581837 GAGGAGCATAAGAGCATCTG 58 6581777 6581795 CATCGTCCTTGTTTCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15891 FBgn0029860 FBtr0100319 3 1 1 60 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187729 6187747 CTTCTTTCGCTCCTTGGTC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Spx FBgn0015818 FBtr0070894 3 1 1 99 X 6149976 6150068 AGATGCCACCATCTATGCC 59 6150130 6150207 CATGTGTACGTTCACCACTG 59 NA Drosophila melanogaster 61 CG12728 FBgn0029825 FBtr0070859 2 1 1 82 X 5837256 5837275 GCTAGGGATTATCCATGCCA 59 5837320 5837421 TTTCCACAGTCACTTTGCG 59 NA Drosophila melanogaster 61 CG4064 FBgn0029808 FBtr0070812 2 1 1 95 X 5679050 5679068 TCATCCAGGATCTGCAACG 59 5679127 5679211 TCTTGGACGCCACTATCAG 59 NA Drosophila melanogaster 61 CG15772 FBgn0029799 FBtr0070808 2 1 1 60 X 5647485 5647504 CCATCGATATACCGGATCCC 59 5647525 5647545 CAGCTGGTCAAATCTGTAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465,FBtr0300466 3 2 3 82 X 5523482 5523501 TTCCTTCTCATCTGCAACGT 59 5523047 5523437 TCCAGCTGAACAGGATTGG 59 NA Drosophila melanogaster 61 l(1)G0045 FBgn0026702 FBtr0070782 2 1 1 95 X 5518432 5518519 CATTAGCGGGAGTTCAAAGAG 59 5518575 5518594 ACTTTCGGTAATTGGTACGC 58 NA Drosophila melanogaster 61 CG12682 FBgn0029729 FBtr0070716 3 1 1 60 X 4720496 4720514 CTCCTTTCACCCTTAACGC 58 4720537 4720556 TTTGGCTATTCAGTAGGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670,FBtr0070651,FBtr0301475,FBtr0070650 1 5 5 80 X 4251895 4252313 CACTGAAATCCTCTTTAAGGACTG 59 4252350 4252370 GACAGGATTACCGGATACTCG 59 NA Drosophila melanogaster 61 CG15578 FBgn0040905 FBtr0070659 3 1 1 60 X 4171820 4171840 AGTCCATTATAATGGTCCTGG 57 4171780 4171798 ATGTTCAGCTCTGTGTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc4B FBgn0052774 FBtr0070662 3 1 1 174 X 4139681 4139798 TGCCGTCACTTTGTTTAACTG 59 4139527 4139550 GAGGATTCTGTAGTATTTGATGCC 59 NA Drosophila melanogaster 61 CG10802 FBgn0029664 FBtr0070568 3 1 1 106 X 3377103 3377186 GTTTCCTGAAGGAGTTCAAGAC 59 3377251 3377271 GATCACATTGAAGCCCTTGAG 59 NA Drosophila melanogaster 61 Sgs4 FBgn0003374 FBtr0070524 3 1 1 64 X 3144738 3144756 ACACCAGAATCGGGATGTG 59 3144784 3144802 ATACATCCGCTTCCTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ng3 FBgn0010295 FBtr0070539 3 1 1 60 X 3135855 3135875 GAGGACGTATCACTATACACG 57 3135815 3135837 CCTATAGATATGTCGTATCCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fcp3C FBgn0000644 FBtr0070542 2 1 1 80 X 3067749 3067772 CAGGAATTGGATCATATGTTTCCC 60 3067620 3067711 TTGTACGATCGTCTCTAGGC 59 NA Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 1 1 1 77 X 2842166 2842253 GTAGCCCTGGTAACAGGTG 59 2842294 2842312 CACTTTGGCACCATCTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32793 FBgn0052793 FBtr0070550 1 1 1 274 X 2823950 2823968 CATGACCAAGTTCGTGGTG 59 2824350 2824368 GCGGGTGGATGATAAAGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12498 FBgn0040356 FBtr0070489 2 1 1 60 X 2704399 2704419 CAGCACGAGATTAACGATGTC 59 2704441 2704459 GCCACAGTTCGAATTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fs(1)Yb FBgn0000928 FBtr0070484 1 1 1 110 X 2614789 2614807 GAAATTTGAGCTCGCCGAG 59 2614880 2614958 AGAGCTTGGTTGATGTACCC 59 NA Drosophila melanogaster 61 HLH3B FBgn0011276 FBtr0070506 1 1 1 227 X 2575381 2575401 CGATTACATCGTTCTGAATGG 57 2575077 2575095 CTTGTGTTGGTGAACACCT 58 NA DesignNoJunction Drosophila melanogaster 61 wds FBgn0040066 FBtr0070438 3 1 1 81 X 2481350 2481368 GAAGACGTATACGGGTCAC 57 2481413 2481485 ACTCACGATCCACTTTCCT 58 NA Drosophila melanogaster 61 CG3457 FBgn0024984 FBtr0070392 3 1 1 61 X 2082263 2082282 GAGGAGATACTGAGACCCTC 58 2082306 2082324 GAATTAGTGGTGCCAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14812 FBgn0026090 FBtr0070372 1 1 1 97 X 1752662 1752680 CATCGGAATGGCCATTTCC 59 1752429 1752601 TGACACAGCGTTTGTTTCC 59 NA Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070301 1 1 2 80 X 1683703 1683771 GGATGCAATTAGGCTGTCG 59 1683812 1683833 TGGCAATAATAGATTGTGGCTC 59 NA Drosophila melanogaster 61 CG14627 FBgn0040361 FBtr0070199 3 1 1 63 X 1076554 1076572 ATCCGGAAACTCGGTTCAG 59 1076598 1076617 CGAAATGGGCACTATGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11384 FBgn0040363 FBtr0070251 1 1 1 60 X 1068974 1068992 GCAGCACAGGAAACTAGAG 58 1068932 1068952 GTAGAAGCAATCGTTGTAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34320 FBgn0085349 FBtr0112522 2 1 1 61 X 1057785 1057907 GAGGCAAATGCCTTCTTGG 59 1057742 1057761 GAAACGAATGCATTTCCTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070168,FBtr0070167 2 2 3 144 X 829695 829713 AAATCACGCTGCAAGTCAC 59 830441 830459 CTGGATCACAAACTCGTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41620 FBgn0085826 FBtr0114284 1 1 1 60 U 9844455 9844473 TGAAGAACGCAGCAAACTG 59 9844413 9844433 AATGTCGATGTTCATGTGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40766 FBgn0085773 FBtr0114223 2 1 1 147 U 8596276 8596295 GGTTCCACTTTCGTAACCTG 58 8596405 8596423 CTTCCATGGTAGTACGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41020 FBgn0085556 FBtr0302525 3 1 1 122 U 7799099 7799178 CGGGAAGCCATGATTACTC 58 7799264 7799282 AATGGTTATCGTCACCAGC 57 NA DesignNoJunction Drosophila melanogaster 61 SteXh:CG42398 FBgn0259817 FBtr0300105 3 1 1 110 U 6622022 6622040 TCTGATACACAGCTGGACG 59 6622114 6622192 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG40801 FBgn0085520 FBtr0113933 3 1 1 144 U 2929776 2929870 TTTCAATTCATCGTTGAGGGC 59 2929652 2929670 GTGCTTTGACACCATCACC 59 NA Nonspecific Drosophila melanogaster 61 CG41518 FBgn0085663 FBtr0302253 2 1 1 60 U 2334237 2334255 CTGACAGCAATACTGCGAG 58 2334195 2334216 AACATATTGTCCAGGTTAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 3 2 2 80 4 1224349 1224368 TCGTTACAGTCTACCTCAGC 59 1224410 1225002 GTCGAATGATGGTAGCTCAG 58 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220,FBtr0089221 1 2 2 60 4 1051070 1051088 GTGGTAATCAGCAAGCGTC 59 1051028 1051048 TTGTATGTTCCTTCTGACCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083343,FBtr0083344 2 2 4 81 3R 12570417 12571157 AAGCACATTATCACTTCCCA 57 12570355 12570373 GGAACCACAAGTACAGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 krz FBgn0040206 FBtr0085877 1 1 1 80 3R 27875581 27876998 CTTTGTGGGTGAGAACGTG 59 27875519 27875537 GGTGCGTACATGACTTTGC 59 NA Nonspecific Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 2 2 2 88 3R 27617576 27617594 GGATCCATTTGTTGCCACC 59 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 CG2135 FBgn0039874 FBtr0085858 2 1 1 80 3R 27595668 27595686 TAGGTTCGGAAAGCCTGTC 59 27595552 27595626 CAAATAAAGGCGGGAAGTGAG 59 NA Drosophila melanogaster 61 rod FBgn0003268 FBtr0085795 3 1 1 80 3R 27407667 27407750 GAACACTATATTATCGCACTCACC 59 27407788 27407807 TTGACACATGTACACTGTGC 58 NA Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0085758 2 1 2 80 3R 27047177 27051544 CACCCACATAGACTATGACCC 59 27051584 27051604 AGGACATAACTTAAGGGCAGG 59 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 3 2 2 80 3R 26926451 26926528 AAATACAGGCAATTGAGACGG 59 26926391 26926413 GCATAATACTTTCGAAGAGGGTG 59 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085743 1 1 3 120 3R 26886877 26886896 CTGCGAATATCAAGATGGCG 59 26886171 26886799 CCTTCTTCTAATTCGACACTTACG 59 NA InUTR Drosophila melanogaster 61 Rpt6R FBgn0039788 FBtr0085680 3 1 1 118 3R 26409039 26409112 AACTCAACCTCAAGGTTCG 57 26408939 26408957 ATGAACCTTCACAAGGACC 57 NA Drosophila melanogaster 61 CG9682 FBgn0039760 FBtr0085617 2 1 1 99 3R 26077257 26077275 ATCAAGTGTCCCAGGAAGC 59 26077394 26077495 CGCTTACTGACAGATTTCTTACTG 59 NA Drosophila melanogaster 61 Anp FBgn0000094 FBtr0085611 3 1 1 111 3R 26035715 26035733 CTTTGTGGTCCTTGTCGTC 58 26035870 26035888 AGCAGCATTGTGTATTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34317 FBgn0085346 FBtr0112516 1 1 1 60 3R 25882729 25882749 GTGGTTACCAATATCTGGACG 58 25882876 25882894 GTCAGAGTCACGGAGTCTG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG7928 FBgn0039740 FBtr0085600 3 1 1 60 3R 25862278 25862296 GGAACTGATCCACAGTCCC 59 25862236 25862256 GTCCTCTTTGTAGGAGGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15517 FBgn0039718 FBtr0085515 3 1 1 129 3R 25729266 25729346 AATAGTACCGTCTGCCTCAC 59 25729156 25729174 GAATGCAATATGTGGGCGG 59 NA Drosophila melanogaster 61 CG7837 FBgn0039696 FBtr0085537 2 1 1 80 3R 25624001 25624021 TCGAGATTCTGAAGTGTCTGG 59 25623884 25623962 AGGTATTCCAGGAAATGGACTC 59 NA Drosophila melanogaster 61 yata FBgn0260990 FBtr0085477 3 1 1 80 3R 25576625 25576706 GCTCCCATGTTTAAGCTGG 58 25576750 25576768 GAACAGTTTGACCACGCAG 59 NA Drosophila melanogaster 61 yata FBgn0260990 FBtr0085477 2 1 1 80 3R 25577510 25577529 CAGCCAAAGTGATTCGTCTC 59 25577572 25577655 GATGGTTGTTCAAGCGACG 59 NA Drosophila melanogaster 61 CG11900 FBgn0039650 FBtr0085407 1 1 1 80 3R 25028151 25028170 TCCATCTGCCAAATTCATGG 58 25028023 25028108 GTTTCCTGAGGATCCTTGC 58 NA Drosophila melanogaster 61 CG17991 FBgn0039498 FBtr0085121 3 1 1 60 3R 23067302 23067322 CATTGCATACCCGAATCTCTG 59 23067342 23067362 GATAAGATCGTTGGTCAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlT FBgn0029170 FBtr0085101 2 1 1 146 3R 22874999 22875120 GGATATAGCAACACCGAGGA 59 22875229 22875247 ATGAAGGCTTTCATGGCTG 58 NA InUTR Drosophila melanogaster 61 TwdlS FBgn0039443 FBtr0085034 3 1 1 92 3R 22462477 22462558 GCTCTCCTTGTTGTTACTATGG 58 22462611 22462629 CCTCCAGATGACACTTCGT 59 NA Drosophila melanogaster 61 TwdlN FBgn0039441 FBtr0085031 2 1 1 94 3R 22458105 22458123 CTACACCGCTAACGAGGAG 59 22458181 22458199 CCTTGATGAAGACGACACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14551 FBgn0039408 FBtr0084971 1 1 1 129 3R 21887694 21887712 CAACAATCTCTGGCTGGAG 58 21887271 21887289 ATAGATAAGTGGTCCCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 HLHm7 FBgn0002633 FBtr0084960 3 1 1 60 3R 21863241 21863259 TCTCAACCAACTGGAGCAG 59 21863281 21863301 GATACTGAGTGGAGTGTTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm7 FBgn0002633 FBtr0084960 2 1 1 60 3R 21863084 21863105 AGCTGAAAGAGTCTAAGAAGCA 59 21863125 21863144 TATCCAGCACGGAAACTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31089 FBgn0051089 FBtr0084942 1 1 1 80 3R 21729346 21729427 TGTGAATATGACTGCTATGCC 58 21729467 21729487 TGTAGGTAGTGCAACATTTGG 58 NA Drosophila melanogaster 61 CG10560 FBgn0039325 FBtr0084852 1 1 1 80 3R 21145502 21145580 GAAACGAAGGACAAATCGGA 58 21145441 21145459 AAGAAGCTTGCGATATGCG 59 NA Drosophila melanogaster 61 CG13658 FBgn0039315 FBtr0273361 2 1 1 112 3R 21113666 21113685 GTCATCCGAGATCGTTATCC 57 21113759 21113836 TTAAGAAAGTCAGGTCGCTC 57 NA Drosophila melanogaster 61 beta4GalT7 FBgn0039258 FBtr0084755 1 1 1 119 3R 20849864 20849952 ACATTCAGCCATATTCACAACC 59 20850030 20850050 TTTGTACTTCACGTTGTCCAG 58 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 2 2 2 84 3R 20682414 20682486 TACTTCACCTACCAAGGTTCG 59 20682350 20682368 GAACATCGAGAGGAGTCGG 59 NA Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084686 2 1 2 102 3R 20538732 20538753 AGAGCTTTCTACAGTCTACCAG 59 20538816 20540786 GAACAGCAGAAATGGCCTC 59 NA InUTR Drosophila melanogaster 61 CG10694 FBgn0039147 FBtr0084542 2 1 1 60 3R 19933626 19933644 GGAGGTTGTTTCAGAGCAG 58 19933665 19933686 CAATTGATCACTTGTCTGTACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Miro FBgn0039140 FBtr0084596,FBtr0084595 1 2 2 172 3R 19862532 19862662 AGAACAGGAGCTCACATCC 59 19862378 19862396 TCTGTATCACGGCCTTCAC 59 NA Drosophila melanogaster 61 TfIIA-S FBgn0013347 FBtr0084526 1 1 1 179 3R 19716545 19716619 ACGAGCTGATTCAGTACGG 59 19716384 19716404 CATCGTTAAGCATGAGAGTCC 59 NA Drosophila melanogaster 61 eIF-3p66 FBgn0040227 FBtr0089622 1 1 1 80 3R 19507224 19507318 GCGATATTGTCCTGGTAGC 58 19507362 19507380 TGATAGTCATGAACTGCGG 57 NA Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 1 2 2 87 3R 19382009 19382027 ATTTCTGTTTGCAGCCGAG 59 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 1 1 1 61 3R 19364222 19364241 AAATAGACGGAGTACGTCAC 57 19364120 19364201 CATAAGATTCTGCATAAGCTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13838 FBgn0039041 FBtr0084344 1 1 1 85 3R 18868097 18868115 ATATCGATGGAGAGTCGCC 58 18868164 18868182 TTGACTCTGGCCATCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or94a FBgn0039033 FBtr0084341 2 1 1 87 3R 18813738 18813817 ATTAGAAGCCTAACCCTGACC 59 18813865 18813884 TAAAGCAGATGATCAGGGCA 59 NA Drosophila melanogaster 61 CG6937 FBgn0038989 FBtr0084266 3 1 1 185 3R 18411078 18411159 AAGGTTGTCAATAAGGCCG 58 18411307 18411326 TAAGTTGGAGAAGTCGATGC 57 NA Drosophila melanogaster 61 Rpn7 FBgn0028688 FBtr0084294 3 1 1 60 3R 18286838 18286859 CTTGTACAACTGCCAATATGAG 57 18286799 18286817 CAATTGCTTCTCTACGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pinta FBgn0038966 FBtr0084297 2 1 1 116 3R 18249656 18249674 AAGAGATCCGTGGAAAGCT 58 18249501 18249580 GGGCGTCATGAATATTCTAAAGG 59 NA Drosophila melanogaster 61 CG7069 FBgn0038952 FBtr0084215 3 1 1 81 3R 18198668 18198687 CCATATGTTCCACTTGCCTG 59 18198730 18198801 AACTTCGGTGGTTTCTTCTC 58 NA InUTR Drosophila melanogaster 61 CG5391 FBgn0038943 FBtr0084242 2 1 1 92 3R 18159403 18159703 CACAAATGATCCTGCTGAGC 59 18159330 18159348 ATGTTCCCAGGTCTTTGGT 58 NA Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0111019 2 1 2 80 3R 17704016 17704035 AGTACCACTGTAGCAAGAGG 58 17703787 17703974 AGCATTGGTAAGCCTTAAGG 58 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0113263,FBtr0084155 2 2 3 105 3R 17693456 17693539 CATTCTCAGCAACTTTGTGC 58 17693370 17693391 GCGGTTCTCATTTAGAATTTCG 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 3 3 3 95 3R 17109864 17109882 CTGATGTGCAAGTTTGTGC 58 17106316 17109805 GATGGCAATGAACCTGTCC 58 NA Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 3 2 2 102 3R 17101293 17101370 AAAGATCACGAGCATCAGTC 58 17101210 17101228 TATATCCTCCGATCGCAGC 58 NA Drosophila melanogaster 61 Rab1 FBgn0016700 FBtr0084104 3 1 1 83 3R 17093453 17094506 GTGAATCCGGAATACGATTATCTC 59 17093393 17093412 AAATCGCAACAGAAGACAGG 58 NA Drosophila melanogaster 61 NELF-A FBgn0038872 FBtr0084051 3 1 1 81 3R 17054078 17054159 CTCTATCGAACGAACACGT 57 17054204 17054222 ATAAGGGCTTTGTCAGGTC 57 NA Drosophila melanogaster 61 slmb FBgn0023423 FBtr0084032 3 1 1 80 3R 16950931 16950949 AACACGGACAGATCAATGC 58 16948301 16950887 GATCCAGACCCTTGATTGG 57 NA Drosophila melanogaster 61 CG10830 FBgn0038839 FBtr0083986 1 1 1 68 3R 16722516 16722534 ATCACCATCGGTTACCGTG 59 16722466 16722484 CTTCCGGAACTTAACGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31210 FBgn0051210 FBtr0083844 3 1 1 94 3R 15842984 15843002 TAGATCACAGATGCCGCAG 59 15841011 15842926 GTTCAACGCCTTGATTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0083828,FBtr0273258,FBtr0273259,FBtr0083827 1 5 5 80 3R 15842727 15842807 CAAAGGACTTTGACGTCCTC 58 15842849 15842868 GATTGCCGTTCTCATAGACG 58 NA Drosophila melanogaster 61 CG17751 FBgn0038717 FBtr0273217 2 1 1 241 3R 15433427 15433516 TATCACCACAGAGCTGGAG 58 15433715 15433739 CCATAAACAGACCGGATATAAATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG42613 FBgn0261262 FBtr0302093 2 1 1 80 3R 14795946 14795964 GGTGAATCGAATCAGAGGG 57 14796007 14796368 ATAGTCAAATGGGCAGTGTG 58 NA Drosophila melanogaster 61 VAChT FBgn0015323 FBtr0083671 1 1 1 132 3R 14531821 14538158 CGATACAGGTTGTTCACTGG 58 14538252 14538271 TCGTTGCTTGTGGTTAACTG 59 NA InUTR Drosophila melanogaster 61 Cpsf73 FBgn0261065 FBtr0083690 2 1 1 86 3R 14487468 14487547 GATCTGGGCAAATACACGG 58 14487400 14487418 CTCTAGAGTGCTCAGCGAG 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637,FBtr0290107 3 2 5 126 3R 14399184 14399202 AGTTCCCGTGTGAAATTGC 59 14412043 14412063 CTCTTTCTTGGGATTCTTTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0300246 1 1 6 111 3R 14079171 14081051 CAGTTTCCCAAAGAGTTCGA 58 14079079 14079097 AGAACTCTTGCTCCTCGTC 59 NA Drosophila melanogaster 61 DNaseII FBgn0000477 FBtr0083538 2 1 1 83 3R 13845229 13845806 ATGTAGATTGGTGGCACCT 58 13845853 13845871 GGTACTTCAAGCCACTGGT 59 NA Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 1 2 2 81 3R 13837363 13837384 TGTTGTTAACTCACTACAGCAC 59 13837424 13837826 CTGCTGTTGGTCTCTAAAGAG 58 NA Nonspecific Drosophila melanogaster 61 CG18012 FBgn0038552 FBtr0083523 2 1 1 224 3R 13635512 13635588 TTTCAAGTGCCTGGATGAG 57 13635306 13635324 AGAAATGCCTCCAGTACGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7523 FBgn0038533 FBtr0083490 2 1 1 80 3R 13496058 13496141 TGGGTCATCACATATCTCTTCG 59 13495999 13496018 GTGAAAGTCGTGATAGCCCT 59 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0300767,FBtr0083502 1 2 2 60 3R 13436768 13436787 GTGGATCGTACCACAATCAG 58 13436727 13436749 GAGTACTGTGACTGACTATAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 1 3 3 88 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901830 12901850 CACATTCAGTTCATCCCTTCG 59 NA Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 1 2 2 80 3R 12306994 12307015 CAATTTAATCGTGGCAGTTTGC 59 12307054 12307124 TTCAGCTCAGATTTAATGCGC 59 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 1 2 2 92 3R 12205517 12209719 GATATGTTCCTCCAGGCCC 59 12205443 12205463 CAAATAGCTCTCGATGCTGTG 59 NA Drosophila melanogaster 61 CG17929 FBgn0038415 FBtr0273219 3 1 1 112 3R 12151866 12151887 GTACCGTTCCTTATCCATAGTG 58 12151958 12152039 TCATAGATAACCTGGATGGCA 58 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 3 3 3 90 3R 11928092 11928112 GCTCCGGAAGTATTAGATGAC 58 11928164 11928245 GACGACCACAGATCATCTC 57 NA Drosophila melanogaster 61 CG10407 FBgn0038395 FBtr0083237 1 1 1 80 3R 11871569 11871593 AGGAGTAGTACTACATATAGACTGG 58 11871381 11871532 ACCTTAAGAAAGGATGGCAG 57 NA Drosophila melanogaster 61 Rbf2 FBgn0038390 FBtr0083213 2 1 1 60 3R 11792183 11792201 CTAGTTGGAGACGACACCC 59 11792220 11792243 GATTGATATCTAGCATACCCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4221 FBgn0038385 FBtr0083201 1 1 1 90 3R 11757605 11757695 ATACAAGTCACAGATGCGG 57 11757749 11757767 CTGTGATGTTCAGGCAGTC 58 NA Drosophila melanogaster 61 CG12784 FBgn0038356 FBtr0083169 1 1 1 60 3R 11589086 11589104 CGTTTCGTCACTCTTTCGG 59 11589126 11589146 ATGTTAGAATATCGGGCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31461 FBgn0051461 FBtr0083166 2 1 1 66 3R 11546565 11546583 AAACAGAAGCCTGAAGTCC 57 11546611 11546631 GCTCGTACACGAATAATTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6045 FBgn0038349 FBtr0083151 2 1 1 80 3R 11371303 11371379 ATGAGTCCTATAAGATCATGCC 57 11371244 11371262 CGGCTTCCAATTCTAGGAG 57 NA Drosophila melanogaster 61 ldlCp FBgn0026634 FBtr0083114 1 1 1 94 3R 11186018 11186091 GCTTTCAAGAAATTGCTGGT 57 11185943 11185963 TTTGTAGTCACTATCGGTGAG 57 NA Drosophila melanogaster 61 CG31301 FBgn0051301 FBtr0083087 1 1 1 80 3R 11172862 11172942 CTATAGTATTAAGCTGAATGCCACG 59 11172978 11172998 TTGGTGACTTTGATGTTGACG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 3 7 13 147 3R 11122418 11125005 GAAATACGATGAGGTTGCCC 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083129 3 1 3 204 3R 11087616 11088283 TCACAATCAAGCTGGAACG 58 11087430 11087448 GTGCGTCTATCTACACTGG 57 NA DesignRelaxed Drosophila melanogaster 61 Art3 FBgn0038306 FBtr0083134 2 1 2 108 3R 11055043 11055062 ATTTGTGATCTTCGTCGTGC 59 11054890 11054972 CTGTGGTGTTGTCGTTGAC 59 NA InUTR Drosophila melanogaster 61 CG31304 FBgn0051304 FBtr0083040 2 1 1 80 3R 10926019 10926038 GTTCATAATGGAGGATCGGG 57 10925901 10925976 AACACATTACCTGTCAGCA 57 NA Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 1 2 2 80 3R 10717530 10717549 TTCAACACATGCTACAAGGA 57 10717592 10717684 GAAGAGCATATCCTCGCAC 58 NA Drosophila melanogaster 61 Cys FBgn0004629 FBtr0082980 1 1 1 122 3R 10395075 10395153 AGCTACAAGGCAATCAATGTG 59 10394973 10394991 AGTCCAGATCTTCACGGTG 59 NA Drosophila melanogaster 61 CG14840 FBgn0038217 FBtr0082952 2 1 1 61 3R 10086213 10086231 CCGGGTGGAGAATCTAACC 59 10086170 10086188 GCTTGGTCTTCTCGAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 1 2 2 92 3R 9945942 9946017 CATTGAGAAGGTGGTAGCCA 59 9945869 9945887 TTCTTGAGCACGTACAGCA 59 NA Drosophila melanogaster 61 yellow-e2 FBgn0038151 FBtr0302576 1 1 1 128 3R 9232073 9232347 TTATCCACCTAATGGCGGT 58 9231963 9231981 GGATAGGCCTGGATTTCAC 57 NA Drosophila melanogaster 61 CG5509 FBgn0038054 FBtr0082633 2 1 1 60 3R 8278546 8278565 GGTCAGAAACTGAGTGACCT 59 8278585 8278606 CGTACGGACTAAAGTTAATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10035 FBgn0038028 FBtr0082606 2 1 1 115 3R 8208149 8208167 TGAAGGAAACTCGGAAGCA 59 8207983 8208001 TCAGGTACTGCTGAAAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 GstD7 FBgn0010043 FBtr0082574 1 1 1 60 3R 8204599 8204619 CCCTGACCAAATACTTCTTCC 58 8204641 8204659 AGAGCTTCCTGATCTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3916 FBgn0038003 FBtr0082560 3 1 1 78 3R 8055761 8055779 TGACTCGGAACGAGATCTG 58 8055881 8055899 CTAATCAAGGGTCCACCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3809 FBgn0037995 FBtr0082545 2 1 1 60 3R 8024271 8024291 GCCTGCTAACACTTTATCAGC 59 8024419 8024437 ATGATCACAGCACAAGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082474,FBtr0082473 2 2 2 86 3R 7645692 7645710 GTCAACGACATTGCACTGG 59 7645759 7645778 CAAGTAGGGATAGAGGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12594 FBgn0037941 FBtr0082429 1 1 1 80 3R 7556033 7556113 ATTAAGGGCTAAGAACGACAC 58 7556152 7556173 GCCTCCAGATAAAGATTGTGAG 59 NA Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 2 1 1 235 3R 7500144 7500225 CTACAGAGGAGCACTGCAG 59 7500424 7500442 ACTCCGTATCGAAGACGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100323 1 1 3 110 3R 7390245 7390263 AAGAGCATCATCACCCTGG 59 7386919 7390172 GGGAATTAGGGTGATCAGCT 59 NA Nonspecific Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082392 3 1 2 107 3R 7263811 7289757 ATACGGTACAGGAGGAAGGA 59 7289827 7289845 TTGTGTTCCTGTTCCATGC 58 NA InUTR Drosophila melanogaster 61 CG17187 FBgn0037882 FBtr0082365 3 1 1 70 3R 7057289 7057307 AATCCGGACAATCCGAAGG 59 7057237 7057255 TCATCCGTGAGGATCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4757 FBgn0027584 FBtr0082339 1 1 1 80 3R 6987900 6987918 GCGACTTTCACAAGGTAGC 59 6987959 6988050 CATTTCGCAGATCAAAGAAAGC 59 NA Drosophila melanogaster 61 CG4596 FBgn0037849 FBtr0082289 3 1 1 71 3R 6699040 6699058 GATCACATCGTCAGTGTGC 59 6699281 6699299 GAGCTCCTCTTCAAGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314,FBtr0082313 2 2 2 84 3R 6579297 6579315 GGCAATATGTTACTGCCGG 59 6579167 6579251 GAAAGGCAATTGACATCAGTG 58 NA Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314,FBtr0082313 3 2 2 89 3R 6580955 6580973 TGATGGCTTCTTCGTCCTG 59 6580820 6580904 CCGCAGATGATTAAACCATCG 59 NA Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0112895,FBtr0082238 3 2 2 88 3R 6190257 6190276 GGAGGAGAAGTACTTGAGCA 58 6189970 6190206 ATTGGTAGTCCACCTCTCG 58 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198,FBtr0082196,FBtr0301386,FBtr0082197 2 6 6 115 3R 5930688 5930706 GAACATACCACGTGAGCTG 58 5930509 5930610 GTTCTACTTCCTTCAGGTGC 58 NA Drosophila melanogaster 61 nmdyn-D7 FBgn0028997 FBtr0082083 1 1 1 80 3R 5506149 5506228 AAATATCGCAAGAAGGGATTCG 59 5506265 5506287 GATCAGAGTCTTTAGGAACTTGC 59 NA Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082078 2 1 2 101 3R 5457569 5458111 GTTGAAACCGAAACCTATGGA 58 5458172 5458192 CGGCAGGAAAGATATCATCTC 58 NA Drosophila melanogaster 61 CG9427 FBgn0037721 FBtr0082104 1 1 1 102 3R 5451466 5451484 GAGTTGCGTCATCAACAGC 59 5451278 5451401 ATTGGCACACTGATCAATGC 59 NA Drosophila melanogaster 61 AP-47 FBgn0024833 FBtr0082114 1 1 1 80 3R 5384083 5384160 TGAACACGCATGTCAAACC 59 5384021 5384041 TAATCATGTACTCCACACGGG 59 NA Drosophila melanogaster 61 Ras85D FBgn0003205 FBtr0082122 2 1 1 89 3R 5337714 5337889 AGCAAGTGGTTATCGATGGA 59 5337644 5337662 TATACTGATCCCGCATGGC 59 NA Drosophila melanogaster 61 alpha-Man-II FBgn0011740 FBtr0082031 3 1 1 82 3R 5239049 5239068 AAATCTCCTACTTTGCTCGG 57 5239110 5239463 CTGTCCATTCTTTACAATGGAC 57 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 3 2 2 69 3R 5091781 5091858 ATAACCTGGAATTCGTGGGA 58 5091731 5091749 GTAACGCACTTCTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mst85C FBgn0028708 FBtr0081969 3 1 1 174 3R 4876706 4876725 ATCATTCCCATTCAATGCGC 59 4876920 4876939 CCTCTCCTCGGTTATAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11982 FBgn0037653 FBtr0081965 3 1 1 60 3R 4832963 4832982 AATAGTAACTGGACCCGGTG 59 4833003 4833023 GAAGAACATGTGCGAGTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31460 FBgn0051460 FBtr0081873 2 1 1 104 3R 4388600 4388677 GTAATATGTCCGCTTCAGTGAG 59 4388742 4388760 ATTCTGAGCAGAAACGCAG 58 NA InUTR Drosophila melanogaster 61 mRpS18A FBgn0051450 FBtr0081897 2 1 1 80 3R 4388177 4388197 GTACGAAGTACCATTGCTCAG 58 4388021 4388137 CTCCTGCTTCTCATGAATCTC 58 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 1 1 1 118 3R 4116155 4116235 TTTGCTGACTTTGGCAGAC 59 4116055 4116073 CACTTACGGCAATCTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 ato FBgn0010433 FBtr0081828 3 1 1 60 3R 4104111 4104134 GGATCTCAATACCATGTACAATGG 59 4104153 4104171 TCCGTATTGTTGGTTCTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7800 FBgn0037552 FBtr0081795 1 1 1 60 3R 4044793 4044811 CTTCGATTCGCCAATTCCA 58 4044832 4044853 TATTCTATTGTACGAAGCGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10086 FBgn0037517 FBtr0081744 2 1 1 104 3R 3618428 3618606 TCGTACCAGATTTACCTCCTC 58 3618672 3618690 GAGTAAATCGGGAGGCCTC 59 NA Drosophila melanogaster 61 MAGE FBgn0037481 FBtr0081606 1 1 1 60 3R 2980371 2980391 CTCGAAACTGTACGTTATGCT 58 2980331 2980350 GTAGCCATGTTCTTCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 e(y)2b FBgn0040670 FBtr0081562 2 1 1 89 3R 2920109 2920196 CAAATAGTCCCGCAAGCTC 59 2920249 2920267 TCACTACTTATCGAGGGCG 58 NA InUTR Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 1 1 2 72 3R 2569652 2569737 GATGTATCCTTGCGTCGAG 58 2569598 2569618 CTTTGATTTCTCCGAAGACCT 58 NA DesignNoJunction Drosophila melanogaster 61 Atu FBgn0019637 FBtr0078704 1 1 1 155 3R 1440189 1440308 AGGATGTGGGAAAGAAAGCT 59 1440426 1440444 TAGAACGACTGTGGGAGTG 58 NA Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 2 2 2 91 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418645 1418664 GGACTGATTCTTGGTGACCT 59 NA Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789 3 1 2 115 3R 1202657 1202738 TTGTTCCGTTCGCAAAGTG 59 1202817 1202835 TCCGTCATCAAGACATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 2 2 2 86 3R 640424 640444 AACAGGAGTTGTATGCAATGG 59 640492 641023 GATACAGACACATGCCGGT 59 NA Drosophila melanogaster 61 CG14655 FBgn0037275 FBtr0078881 1 1 1 83 3R 604264 604282 ACCACCAGAGGATTCACAG 59 604029 604047 CAAGGAAAGAGACTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33927 FBgn0053927 FBtr0091931 2 1 1 102 3R 516200 516271 TGGGTCTATTAATGCTTCCAG 57 516118 516137 TCGAATTGCCTTTAAACGAC 57 NA Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946,FBtr0301244 1 2 2 82 3R 251599 251617 ATGTAAAGGCCGATCCCTC 59 251469 251555 CAGTTGTTCCGGCTTATTCTC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2622 FBgn0086670 FBtr0091635 2 1 1 60 3L 1488945 1488965 TAGAATTGTTGCACTTTCCGC 60 1488986 1489005 CCAGCAGCCTATGATTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33283 FBgn0053283 FBtr0302444 1 1 1 80 3L 20972309 20972330 ACGTGGCATATTATACCTTTCG 58 20972371 20972474 TTGGACCACTTCTCTTCCG 59 NA Drosophila melanogaster 61 CR32028 FBgn0062463 FBtr0076660 3 1 1 88 3L 8434234 8434252 GAAGGAGCAAGTAAAGCGG 58 8434164 8434183 TGACTTCACGTTAGTTTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 1 1 2 101 3L 22858910 22858982 TCACAGAACTATGAGGTCCC 58 22859043 22860503 CGATTTGTTCTTGGTTTGATCC 58 NA Drosophila melanogaster 61 CG11370 FBgn0037181 FBtr0078522 2 1 1 110 3L 22705671 22705690 ATATGCAGTATGTCCAGCCC 59 22705761 22705846 GATTGCAATCCTTCAGGTAGG 58 NA Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 1 1 1 147 3L 22253461 22253729 GAACAGGTCCCAAACACCT 59 22253332 22253350 GTATTGGAAGCCATACGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Act79B FBgn0000045 FBtr0078478 2 1 1 80 3L 21979361 21979743 CTACCATGTATCCAGGTATCG 57 21979783 21979803 TGATCTTGATCTTGATGGTGG 57 NA Drosophila melanogaster 61 CG14563 FBgn0037139 FBtr0078444 1 1 1 99 3L 21835172 21835192 CTATGGAGGATATCCCTACGG 58 21835013 21835031 GTAGTATCCGCTTCCACCC 59 NA DesignNoJunction Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349 2 1 3 114 3L 21428222 21428304 GTCACCGAGACTACCTAATCC 59 21428379 21428398 CCACTATGACAATGTCGCAG 59 NA InUTR Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678,FBtr0112677 1 3 3 125 3L 21326357 21326461 TTTAATAGGCAACAAGGCCG 59 21326549 21326567 ACATTGAGTCCCGTCTTGG 59 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 2 2 2 116 3L 21188722 21188881 CGGATGTGAGTGATACCGT 59 21188624 21188642 GATGCGGCATAAACTGACG 59 NA Drosophila melanogaster 61 CG10581 FBgn0037046 FBtr0078326 3 1 1 76 3L 21027247 21027266 TATACTAACTGGGCCACCAG 58 21027127 21027145 GTCCTCTATCCTGCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 3 2 4 80 3L 20769141 20769282 CAGGATCTTTAAGGAATTGGGA 57 20769323 20769341 AACATGTTCTTCACGGCTG 58 NA Drosophila melanogaster 61 CG13247 FBgn0036979 FBtr0078184 1 1 1 95 3L 20364297 20364320 CTTACTATTGGAAGTTGGAGAACG 59 20364373 20364461 GGGACTTGCCTTTAAAGCTG 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302334 1 1 6 60 3L 19685850 19685869 CAACTTTGCGATTGGAAGTC 58 19685466 19685828 GACTTGGTACATTCTCGAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33647 FBgn0053647 FBtr0091624 2 1 1 60 3L 19229483 19229502 ATTGGTTGACCTGATTCTGG 57 19229525 19229602 AACTTCTTTCTCTGCACGA 57 NA DesignRelaxed Drosophila melanogaster 61 nkd FBgn0002945 FBtr0075039 1 1 1 109 3L 19001345 19003703 CGACTGGAGGAATTCACCT 59 19001254 19001272 GTTATCTTGCCGTGATGCC 59 NA Drosophila melanogaster 61 MYPT-75D FBgn0036801 FBtr0075049 1 1 1 115 3L 18657814 18657832 CATTCTCACCGAGAAGGGT 59 18657911 18658806 TATTGGTGTCCACGAGGAC 59 NA Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 2 1 1 116 3L 18600088 18600167 TGCTGGAGAAGTCTCACAG 59 18600247 18600265 TCTGGCGTTGAATCATCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7330 FBgn0036780 FBtr0075127 2 1 1 80 3L 18142290 18142308 GTAATCGTGCTATCCGTCC 57 18142350 18143793 GCGAGATCTATATGTACTGGG 57 NA Drosophila melanogaster 61 CG32195 FBgn0052195 FBtr0075125 3 1 1 89 3L 18108371 18108453 GCAACACTTGTGGATTTCC 57 18108506 18108524 TAATTCAGGCTTGAGGCTG 57 NA Drosophila melanogaster 61 CG5506 FBgn0036766 FBtr0075157 2 1 1 94 3L 17877301 17877388 TCGACTTATGATACCGAGCAC 59 17877227 17877245 AATCCGTAGGGATCGAAGC 59 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 3 3 3 138 3L 17748902 17749051 TGCCAAATATGTACGATCTGGA 59 17748785 17748807 TTCCTAGAAGGAGCATAGATCAG 59 NA Drosophila melanogaster 61 CG33158 FBgn0053158 FBtr0075390 2 1 1 80 3L 16415068 16415149 ATTCTTCAAGGAACTGGCAG 58 16415189 16415210 ACTTTAATCGAAGCTAGCAGTG 58 NA Drosophila melanogaster 61 CG13039 FBgn0036609 FBtr0075430 2 1 1 60 3L 16319583 16319601 TTCGTGAACTCAACCTCTC 57 16319541 16319559 CTGTATCGTCATCCTGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5222 FBgn0036570 FBtr0075495 3 1 1 154 3L 16098582 16098662 TGCGATTGTATTGTCTCAGC 58 16098447 16098466 CAGATTGGACCACTTCAGTG 58 NA Drosophila melanogaster 61 CG33258 FBgn0053258 FBtr0301030 2 1 1 68 3L 16076164 16076182 GTACGCCTTCTTGTGTCCT 59 16076282 16076302 TTGTCGTGTATTCACTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 3 2 2 94 3L 15972040 15972061 CTGCAAATGAGTTGTATTCAGC 58 15972113 15972415 TGCTTGGTTTATCTTCTTAGCG 59 NA Drosophila melanogaster 61 Eig71Eg FBgn0004594 FBtr0075573 2 1 1 80 3L 15650982 15651002 ATATTGCGGACGAAATAACCG 59 15651041 15651118 ACCATAGTTACTATGCACGAGG 59 NA Drosophila melanogaster 61 yellow-k FBgn0036504 FBtr0075556 1 1 1 60 3L 15514385 15514403 ACTCATACTCTCCGACCAG 57 15514426 15514445 TTCAATTTCCAGTCTGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18581 FBgn0036466 FBtr0075666 2 1 1 60 3L 15043003 15043021 GGAAACTCACAGTCCTACG 57 15042961 15042979 GAACTCGCCATCTTCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18581 FBgn0036466 FBtr0075666 1 1 1 60 3L 15042946 15042967 CGAGTTCTTCGAAGATGAAGAG 59 15042907 15042929 GACATCAGTTGGTTTATCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13479 FBgn0040811 FBtr0075721 2 1 1 61 3L 14561057 14561075 GGATCCAGACAGGACTCAC 59 14561014 14561032 TCCTGCTGTGGGATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4613 FBgn0036427 FBtr0075725 2 1 1 102 3L 14514395 14514413 TTTCGCGTTAATCGCTGTG 59 14513743 14513761 GATTCACATTCGGAACGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gl FBgn0001108 FBtr0075756 3 1 1 109 3L 13924205 13924223 GATGAAGCGCTCTGAAGTC 58 13924296 13924861 CAGCATCGACTTGTTCCTG 58 NA Drosophila melanogaster 61 CG10133 FBgn0036366 FBtr0075825 2 1 1 60 3L 13442725 13442743 GAATTTACCCTACAGGCGT 57 13442683 13442704 AACGGTTCAATGTAGAACTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075843,FBtr0075842,FBtr0301405 3 3 3 60 3L 13376549 13376567 CAAGAAGTTCCGGTCATCG 58 13376591 13376609 CAGCTTCAATTGCTCCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17687 FBgn0036348 FBtr0075838 1 1 1 80 3L 13346818 13346839 AGTTTACAAAGCTCTCCAACAC 59 13346879 13346957 TTCCAGCTTCCTGAATTTGG 58 NA Drosophila melanogaster 61 CG10627 FBgn0036298 FBtr0075967 1 1 1 101 3L 12520976 12520994 GTGGTGGCGAAATACAAGC 59 12520824 12520911 ATCGGTGTCCTCTTTGGTG 59 NA Drosophila melanogaster 61 CG4328 FBgn0036274 FBtr0301071 2 1 1 82 3L 12284915 12284991 AGGGATACGATTTCTATGGCG 59 12284853 12284871 TAGAATGGTTCTCGGTCGC 59 NA Drosophila melanogaster 61 Grip163 FBgn0026432 FBtr0076061 1 1 1 83 3L 11989960 11989978 TAAACAACACCTCCACAGC 58 11989834 11989916 CAGTGTTCAGGTTTAATCTTGG 57 NA Drosophila melanogaster 61 CG6931 FBgn0036236 FBtr0076048 1 1 1 81 3L 11984116 11984139 CGGAAGATATGAAGAAGTTCTACC 58 11984174 11984254 CTAATATCGTTGGGAGCATATTGG 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 2 3 3 92 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681314 11681333 CAGTGACCGACTCAAATAGC 58 NA Drosophila melanogaster 61 Sgs8 FBgn0003378 FBtr0076160 2 1 1 95 3L 11502438 11502456 CATGAAGCTGCTCGTTGTC 59 11502292 11502312 CAAATCACGCATGAACAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12289 FBgn0036160 FBtr0076178 1 1 1 60 3L 11450410 11450428 CCGTTAGAATGAGGTGTGG 58 11450368 11450386 AACTGATCGCCGTTATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7638 FBgn0036133 FBtr0076210 3 1 1 80 3L 11103439 11103459 TTCACCGAATATCAATGGCTG 58 11103501 11103619 GTAGAAGTGGAACAGCTCG 58 NA Drosophila melanogaster 61 CG32073 FBgn0052073 FBtr0076230 2 1 1 89 3L 11100385 11100403 GTTGATTGCACCACATCCG 59 11100314 11100333 AGATCCACTGCTACTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42519 FBgn0260394 FBtr0300667 2 1 1 60 3L 10618520 10618539 CATCGATTGAAGCACAAGAG 57 10618420 10618498 TTCCTTGTCAAGAGATTGGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 1 1 1 69 3L 9883258 9883276 ATGATCCGCAGTTCTTCGT 59 9883309 9883393 CAGCAATCGCCAAGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 LanB2 FBgn0002528 FBtr0076382 2 1 1 89 3L 9612733 9612751 CATCAGAATACACCCGCCT 59 9612804 9612888 TGGCTTGCATTCATTGCAG 59 NA Drosophila melanogaster 61 CG3088 FBgn0036015 FBtr0076421 2 1 1 60 3L 9594198 9594216 TGGATCCTTACATCCGCTC 59 9594156 9594176 CTCCAAAGTAGATGGTCACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3434 FBgn0036000 FBtr0076473 3 1 1 80 3L 9452686 9452765 CTTACTGATGGTTCACAACCT 58 9452626 9452645 GGAAGCGTATCTTTAGCCAC 58 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 2 5 5 126 3L 9101076 9101096 TATACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 CG13310 FBgn0035928 FBtr0076590 3 1 1 80 3L 8792053 8792154 CAGTGCAATCAAGTGTTCG 57 8791991 8792012 CTCGGTTGTCTATATCATTCGG 58 NA Drosophila melanogaster 61 CG32022 FBgn0052022 FBtr0076597 2 1 1 80 3L 8713994 8714068 GGAACTACCTCAAAGTGTCG 58 8713933 8713951 CATCGTCCAGTTCTGTCTG 58 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076670 3 1 9 281 3L 8351843 8351864 CTCGTATTGTTTCACATTGGTG 58 8350990 8351118 TGATCTTCTGGGCCATCTC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 3 3 3 80 3L 8269588 8269930 AAACAATGGAGGACGTTCC 58 8269971 8269992 AGGTGATATAGATCGAAGTGGA 58 NA Drosophila melanogaster 61 CG8006 FBgn0035857 FBtr0076698 2 1 1 60 3L 8206032 8206051 CGATGAAGGATGTGATGGAC 58 8206069 8206092 CTCTGTTCAGCTTTCATAGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13679 FBgn0035856 FBtr0076697 3 1 2 153 3L 8195960 8196043 TGAAATTCATCGCCGTCTG 58 8196160 8196178 CTGTAGCTGGAGGCATAGG 59 NA Nonspecific Drosophila melanogaster 61 CG13675 FBgn0035845 FBtr0300119 1 1 1 115 3L 8154635 8157327 TCAATGGGCAAATCGATGG 58 8154538 8154556 TGTGTCCGCATAGTAACCC 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 3 5 5 125 3L 8097908 8097988 GTCTTCTCAAGGTGCATCTG 58 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 2 2 2 98 3L 8048536 8048992 CCATTGAACTTGTTGAGAGCC 59 8048458 8048476 CCGAGGAGCTAATGGAGTG 59 NA Drosophila melanogaster 61 CG7716 FBgn0035800 FBtr0076824 1 1 1 60 3L 7582690 7582711 GTTAATTCCCGAGAAGCTACAG 59 7582651 7582672 GAAATCATTGGACTTATGCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42458 FBgn0259935 FBtr0300248 2 1 1 80 3L 7443666 7445454 TTCAAAGTCTACAGCAATCCG 58 7445494 7445514 GTCCAATAACTCAGACAGCTC 58 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302548 1 1 5 82 3L 7359198 7359269 AACTACAGACGCTGAAGGT 58 7359134 7359154 CTTTGGTACTCTCAACCTCTG 58 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690,FBtr0076839 3 2 2 80 3L 7323268 7323289 ATGAAGAGAAGTCCACTGAGAG 59 7323327 7323407 ATTTATAATCTTCCTTGGCGGC 59 NA Nonspecific Drosophila melanogaster 61 CG10478 FBgn0035657 FBtr0077069 3 1 1 149 3L 6003671 6003759 CAAATTTAATTGCGAAGGCTGG 59 6003543 6003566 GTCCGTGTCTTATGATATAGTCAC 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139 3 4 10 91 3L 5538128 5538147 AACCGTCGTCTAATTCTCGA 59 5537032 5538078 CCATACCTATAGGCATTTGTGTC 59 NA Drosophila melanogaster 61 Gen FBgn0027914 FBtr0077176 2 1 1 80 3L 5144434 5144523 TTTGGATAGAATGAGAAGCTGG 58 5144375 5144393 CAGATGGATTTGTCGTCCA 57 NA Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 1 1 1 117 3L 4487444 4487521 GGGCTATGACTATCCAATTCC 58 4487347 4487365 GTAGGAGTAGCCACTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300988,FBtr0300989 3 2 2 107 3L 4069636 4069717 AGATGAACCCAAATCGTAGC 58 4069785 4069805 AGTAATCTTTCGACACGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12766 FBgn0035476 FBtr0073172 2 1 1 80 3L 3939528 3939550 GCCTTTCTCCTATAAATATCGCG 59 3939351 3939491 TCAATGTCTACAAGTTCCACCT 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073186,FBtr0073188,FBtr0073187 3 5 5 111 3L 3723101 3723652 CAACGAGCACATGTATGGC 59 3723008 3723026 CAGTTCGCTGAGCATTACG 59 NA Drosophila melanogaster 61 CG14966 FBgn0035415 FBtr0073108 2 1 1 60 3L 3197211 3197229 CTAGGTCTTCGAAAGAGCG 57 3197169 3197188 TTATCTTGTTTCGCGATCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14963 FBgn0035409 FBtr0073111 2 1 1 60 3L 3172133 3172154 AGTCTATTGAACCAGTTTCCCT 59 3172094 3172112 TTAGAAATCCTTGCCAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32485 FBgn0052485 FBtr0072985 1 1 1 83 3L 3050623 3050643 CCAAAGCAGTATCACAATGAC 58 3050688 3051013 TAGAATGGCCTGAAATGCG 58 NA Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 1 2 2 80 3L 2244735 2244759 GTGACCCAACTTATTATAGTCATCG 59 2244794 2244871 ATCAATGTTCTTAACCACGCTG 59 NA Drosophila melanogaster 61 Dhc62B FBgn0013811 FBtr0072793,FBtr0072794 3 2 2 80 3L 1769261 1769342 GCAAATTCAAGGGTCAAACTG 58 1769201 1769219 ACTGTATCATCGAGGTGCA 58 NA Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 3 2 2 80 3L 1557834 1557852 AAGCAGCCTCAATCCTCTC 59 1557698 1557793 GCTGTTGGTATGTAACTCACTG 59 NA Drosophila melanogaster 61 CG12084 FBgn0043458 FBtr0072711 2 1 1 80 3L 1491910 1491996 CAATCTGACACAGGTTTATCCC 59 1491851 1491871 ATTAGCTCGTTGAGGATCTGG 59 NA Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 3 1 1 62 3L 1206428 1206544 AAGAGTCGTTCGGCTAGAG 58 1206569 1206588 CTGGAGTTCAATATCCACGG 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-1175a FBgn0083005 FBtr0113527 2 1 1 88 2R 18494607 18494625 TGTTGGAATTGTTGTCCCT 57 18494676 18494695 CATCTATAGCGTAGCTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33416 FBgn0053416 FBtr0086408 1 1 1 68 2R 15630483 15630501 ATACATCGGTTCTCGTCCG 59 15630433 15630451 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a15Psi FBgn0033303 FBtr0088689 3 1 1 117 2R 4457165 4457188 CCGGAGATCTAGAATCAAATAAGG 58 4457264 4457396 AACGATGAGCAGACAAGAC 57 NA Drosophila melanogaster 61 5SrRNA:CR33365 FBgn0053365 FBtr0086357 1 1 1 60 2R 15649249 15649269 TAGTACTTAGATGAGGGACCG 57 15649209 15649227 AAAGTTGTGGATGAGGCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30449 FBgn0050449 FBtr0086333 3 1 1 60 2R 15616797 15616815 TCTAGTGGTTAGGCTACCC 57 15616837 15616857 TCCTATACAGGGAACTGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30370 FBgn0063356 FBtr0088797 2 1 1 81 2R 4153682 4153700 AGAGTGTTCGACTTGGAGG 59 4153741 4153820 CGTAGGTTTAGCTCTCATATCAG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0302575,FBtr0072399,FBtr0100467,FBtr0100466 1 8 8 80 2R 20893443 20893462 GAGCTTACGTGTCTAAACGA 57 20889959 20893406 GGAATATGTATAGATTAGGCCAGAG 58 NA Drosophila melanogaster 61 CG12848 FBgn0040666 FBtr0072437 2 1 1 92 2R 20650489 20650567 GGAAATTACGAGATGCGCG 59 20650415 20650433 CAGAATCTCCTGGAAGGGC 59 NA InUTR Drosophila melanogaster 61 CG13594 FBgn0035041 FBtr0072336 2 1 1 126 2R 20508963 20508981 CAGCAACTACAACAGCAGG 59 20508575 20508873 AGTCAAAGTAGCCGCTCTG 59 NA Drosophila melanogaster 61 CG13587 FBgn0035031 FBtr0072314 3 1 1 97 2R 20485873 20485894 TGAAGTGTCCTCAGAATAACAC 58 20485950 20486027 GTAGTTCCTTACGACTGTTGG 58 NA Drosophila melanogaster 61 bs FBgn0004101 FBtr0290089 1 1 2 260 2R 20232189 20235744 ATGAAGAAGGCCTACGAGC 59 20235968 20235986 TACTTTCGAGTCCTCGTCG 58 NA DesignRelaxed Drosophila melanogaster 61 nord FBgn0050418 FBtr0072263 2 1 1 91 2R 20140570 20140657 GAAAGGAGCAAGTTTGATTTCC 58 20140708 20140727 AAGTTGGTGAAGATCATCCG 58 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 2 2 2 98 2R 20024113 20024137 CATCCAGTTATCAGTTTCTAGAGGA 59 20023981 20024057 TAAAGAAGTTCAGCGCCGA 59 NA Drosophila melanogaster 61 CG4049 FBgn0034976 FBtr0072285 3 1 1 114 2R 19996445 19996522 GCCTCTTGATGTTGTCATTCC 59 19996351 19996371 GTCCAACTGCATGTAGATTCC 59 NA Drosophila melanogaster 61 CG13566 FBgn0034942 FBtr0072206 1 1 1 80 2R 19849573 19849591 ACCTCAAACTATGGCACCT 58 19849457 19849534 GAATATCAGTAGTCCCTCTATGGT 58 NA Drosophila melanogaster 61 Thiolase FBgn0025352 FBtr0072226 1 1 1 227 2R 19755726 19755993 CCAGGAAAGTTCAATGCCG 59 19755459 19755477 TGCCGTACACGATGTAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 12 13 81 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566007 19566083 CATGTCGATGAAGCTCTCC 58 NA Drosophila melanogaster 61 CG10332 FBgn0260455 FBtr0072109 2 1 1 60 2R 19489220 19489244 CCCAATAATCAGATCTATTCTCAGC 59 19489131 19489205 AACCAGATAACTTCTGATGGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9861 FBgn0034844 FBtr0072002 2 1 1 82 2R 19213909 19213988 AAGCAGATTAAGAATACGGCTG 59 19214031 19214049 GAGCTCACGATGCTTAGGT 59 NA Drosophila melanogaster 61 CG13542 FBgn0034809 FBtr0071987 3 1 1 90 2R 18897217 18897235 TGTCCATCAATCGGAGGAG 58 18896794 18897163 CAAACGGCATTCGAATGTG 58 NA Drosophila melanogaster 61 CG9896 FBgn0034808 FBtr0071988 1 1 1 83 2R 18882462 18882480 CAAGATCTGCGGCAATGAG 59 18882340 18882416 TCGCAGTAGATCTTGGTCAG 59 NA Drosophila melanogaster 61 CG4269 FBgn0034741 FBtr0071854 2 1 1 63 2R 18486928 18486947 TTAGTGGAGCAACAGAATGG 57 18487433 18487451 TACGAGTAGTGTCACCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34206 FBgn0085235 FBtr0112399 2 1 1 60 2R 18051972 18051993 CTACACAATTAAATGCAAGCCC 58 18051933 18051956 GATAAACTGATGTCCTTACTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0071797,FBtr0300693 3 2 2 121 2R 17979697 17979715 AGGTGGAGTACACCAAGAG 58 17979512 17979531 AAATCCTCCCGTGTACTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0113103 3 1 2 108 2R 17976025 17976049 GGAGATCGAGACCAATATTAAACTG 59 17974813 17975959 ATCGCTGGGAAGAATCTGG 59 NA Drosophila melanogaster 61 CG13501 FBgn0034684 FBtr0071804 3 1 1 94 2R 17948126 17948147 AGATATCGCAATCACTTTCTGC 59 17947995 17948071 ATATGATGCGTCCACTCCG 59 NA Drosophila melanogaster 61 PpN58A FBgn0025573 FBtr0071734 2 1 1 60 2R 17769644 17769663 TTCGGTGTATCTGCTACTGG 59 17769603 17769622 CAATGTTTCGATGGACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30395 FBgn0050395 FBtr0300226 1 1 1 80 2R 17656926 17657077 CACAGATAATTTGACGCCGA 58 17657116 17657138 GGAATCTTTGGTAGTATTGGCTC 59 NA Drosophila melanogaster 61 CG30403 FBgn0050403 FBtr0114523 2 1 1 80 2R 17598165 17598635 CTTGGACACGAATGAGTTGG 59 17598104 17598123 TTAATCGGCTTCAGTCTGGT 59 NA Drosophila melanogaster 61 CG42365 FBgn0259711 FBtr0299964 3 1 1 60 2R 17554569 17554589 AGCAGGATTCTACTGAAGACC 59 17554611 17554629 CGGCTGGATTAAACTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 clt FBgn0000326 FBtr0071687 1 1 1 66 2R 17505885 17505966 AGTGACTTCCACTTTCCCG 59 17505837 17505855 GTCGGTAATTCAGGGTGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 1 2 2 177 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471440 17471463 GAGGTCATAGAGATTCTTGTTCTG 58 NA Drosophila melanogaster 61 CG10496 FBgn0034631 FBtr0071701 1 1 1 146 2R 17389046 17389141 TCGAAGAAATCCACATGCC 58 17388918 17388937 GCTCATTGTTATCCTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG34115 FBgn0083951 FBtr0110813 3 1 1 101 2R 16864172 16864248 CAGTACTTCGAAAGGCCCA 59 16864309 16864331 CTTGTATTGGTACAATTCCGGTC 59 NA Drosophila melanogaster 61 CG34115 FBgn0083951 FBtr0110813 2 1 1 100 2R 16864172 16864248 CAGTACTTCGAAAGGCCCA 59 16864309 16864330 TTGTATTGGTACAATTCCGGTC 58 NA Drosophila melanogaster 61 CG13428 FBgn0034515 FBtr0086267 3 1 1 115 2R 16427730 16427750 AAAGTTCGTCGGTTTGTTCAG 59 16427303 16427472 ATGTATCACGACGGGATCG 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 1 2 2 90 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198935 16198953 GATCAGACTAATCCGGCCC 59 NA InUTR Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 1 2 2 80 2R 16193965 16193984 GTATCAGTACCTGGGAATCG 57 16193841 16193925 GGTTGTTTATAAAGTGCCACTC 58 NA Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0086338 3 1 2 84 2R 15834743 15834835 CAAACTCCGGAAGTAAGCAG 59 15834882 15834900 TAAGTCGCTACTAGTGGCG 59 NA InUTR Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0086338 1 1 2 82 2R 15834745 15834836 AACTCCGGAAGTAAGCAGG 59 15834882 15834900 TAAGTCGCTACTAGTGGCG 59 NA InUTR Drosophila melanogaster 61 CG8517 FBgn0034472 FBtr0086329 1 1 1 91 2R 15601808 15601826 GTGATCAATAGCGATCGGC 59 15601942 15601960 ACAACGTTCTCCAGTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7744 FBgn0034447 FBtr0086535 1 1 1 80 2R 15341690 15341764 GTGGAATATCCTTTATACTGGTGG 58 15341803 15341821 CTTGGCTCAACAGATTGGT 58 NA Drosophila melanogaster 61 CG10073 FBgn0034440 FBtr0086523 1 1 1 80 2R 15270272 15270357 TCTTATTGGTTTGGACATGGC 59 15270394 15270417 CTGGGAATATTGGAGAATTGATCG 59 NA Drosophila melanogaster 61 mip40 FBgn0034430 FBtr0086560 2 1 1 60 2R 15178902 15178922 TCTGTCCTCCAATATGAACCG 59 15178862 15178885 CTTGATATGCTTTATCCAGTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0086574,FBtr0100137,FBtr0299568 2 3 3 132 2R 14946980 14947108 CAATCAAATAAACGCTGCCT 57 14947294 14947312 CTTGCAGTATCGCCTTGAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 prod FBgn0014269 FBtr0086601 1 1 1 93 2R 14858358 14858376 AAAGTGGAAGGAGCTCTCC 59 14858216 14858301 CTTCCAATCGTTTAGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086701 3 1 2 67 2R 14424570 14424753 ATTATCTCCGGCAATGTCTG 57 14424783 14424801 TACAGACCGCAATTGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG18107 FBgn0034330 FBtr0086663 2 1 1 61 2R 14272150 14272168 CTTTGCAATCGTCACTGTC 57 14272193 14272275 ACAACGGAATAGCATTGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 2 3 3 84 2R 14181661 14181776 AATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 CG17680 FBgn0062440 FBtr0086781 1 1 1 63 2R 14035183 14035201 GTCATACCGGGACTCTTCG 59 14035138 14035156 TCTCCTCCAGAAAGTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30323 FBgn0050323 FBtr0273321 2 1 1 60 2R 13741281 13741301 AAGGAGTTGAATAGCACTTGG 58 13741322 13741341 TTACGTAGTAAATCCTGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4996 FBgn0034271 FBtr0086864 2 1 1 86 2R 13627854 13627932 GAACTCAAGAAAGTTCTCAACG 58 13627979 13627997 AAGAACCTTCTGCTGAGTG 57 NA Drosophila melanogaster 61 CG6401 FBgn0034270 FBtr0086882 1 1 1 113 2R 13626558 13626645 GGCTAAAGACTGTCTTTACCG 58 13626465 13626483 CACAGATGGCGTGATTGAC 59 NA Drosophila melanogaster 61 CG11423 FBgn0034251 FBtr0086834 1 1 1 60 2R 13483650 13483668 ACGAAGGAGATCATAGCCA 57 13483690 13483710 GTCCAGATGTCTTAATCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9010 FBgn0034173 FBtr0087067 1 1 1 60 2R 12846656 12846676 ATCAGTTGGTACGATAACGAG 57 12846616 12846637 CATAGAGAACTAGGTCAAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ef1beta FBgn0028737 FBtr0087041 3 1 1 82 2R 12755887 12756005 ACATCAGCGGATATACTCCC 58 12756050 12756068 GTTCACATTGTCGGCAGAG 59 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 1 3 3 80 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541078 12541164 AAGCCCGAATAGAACTTATCG 58 NA Drosophila melanogaster 61 Amyrel FBgn0020506 FBtr0087117 3 1 1 83 2R 12539605 12539623 GATCACCTCATCGAACTGG 57 12539484 12539562 GTAGATGTACTCTAGATCTTCCG 57 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087123 3 1 2 263 2R 12458505 12458706 AAAGATGGCCGATCAAGTC 57 12458192 12458210 ATCATGTTCCTCAGGTGGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15925 FBgn0034129 FBtr0087159 1 1 1 60 2R 12334392 12334412 GTTTATGCGCTTCTGAATTCC 58 12334431 12334452 AGGTTAGCTCCAGATACTTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087145 3 1 5 110 2R 12224346 12224367 CCCTGGACCATTAATATTAGCA 57 12227021 12227039 GGAAGAGAATCTCGATGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299972 1 1 2 88 2R 12179145 12179163 CTTTCTGGGAAGAGTTCGC 58 12179214 12179233 TGGCACTTACCTTAAAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30099 FBgn0050099 FBtr0087180 1 1 1 60 2R 12176015 12176033 AGAAATCCAGCGATGTCCC 59 12175973 12175991 CCTTCTTATCCCGCTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8405 FBgn0034071 FBtr0087210 2 1 1 80 2R 11936847 11936866 GCTGGAGTACAATGTGTCTG 58 11936908 11937004 ATGGCTTCCATTCCTACGAG 59 NA Drosophila melanogaster 61 CG33465 FBgn0053465 FBtr0301048 3 1 1 83 2R 11707082 11707157 AAACTCAGATCTTGTCAAGCC 58 11707019 11707037 GTGGTCTCATCCACAAGTG 58 NA Drosophila melanogaster 61 CG30466 FBgn0050466 FBtr0087339 1 1 1 81 2R 11460252 11460327 TGTCTAATGAGGATCCCATCC 58 11460370 11460388 TTTGGATGCTTCATGTGCA 58 NA Drosophila melanogaster 61 Hex-C FBgn0001187 FBtr0087399 2 1 1 60 2R 11107728 11107749 AGAACTTATGCAACCCTTTGTG 59 11107689 11107707 AAAGCGACTGTACACTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir51b FBgn0050081 FBtr0087365 1 1 1 60 2R 11096721 11096742 GCAAGTAAATAGCATGGATCAG 57 11096763 11096781 ATACTCCTTGACGAGCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33467 FBgn0053467 FBtr0089861 1 1 1 89 2R 10943539 10943559 AATGTGAAGCCGATCAATTGG 59 10943414 10943488 TTGCACTCGAATTGTTGGG 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 2 4 4 146 2R 10757800 10758426 AGTCGAAACATAGCAACTGC 59 10757673 10757691 TTGACAGATACTCCTCGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HPS FBgn0033973 FBtr0087449 3 1 1 60 2R 10744010 10744029 ACCGATGACCTAGAGAACTG 58 10744052 10744070 TCTTGCGAAGATTCTCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33468 FBgn0053468 FBtr0087503 2 1 1 119 2R 10494355 10494441 TCCCAATAGTGCATATCCCG 59 10494255 10494274 CCAAAGTACTCCACTTCGGT 59 NA Drosophila melanogaster 61 Obp50c FBgn0050072 FBtr0087553 2 1 1 101 2R 10260048 10260122 CAGAATTTCACCCTGCCTC 58 10260187 10260205 AGCTTCTCCAGCATGAGTC 59 NA Drosophila melanogaster 61 beta4GalNAcTA FBgn0027538 FBtr0087539 3 1 1 80 2R 10147583 10147603 CTTTACAACTGTCCACGTCAG 59 10147642 10147720 TATTGATCGATAAGGCAACCTG 58 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 1 3 3 157 2R 10116659 10116677 TTCGGTATCTGCATTGCCT 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 CG18327 FBgn0033904 FBtr0087522 3 1 1 92 2R 10054981 10054999 GATCTCATTCGCAAAGGGC 59 10055055 10055182 AGTTGCGTCTTGATCAGGA 59 NA Drosophila melanogaster 61 CG8323 FBgn0033903 FBtr0087521 1 1 1 84 2R 10053018 10053099 TCAATTCCTTCCGGCTCAG 59 10053147 10053165 ATTCCGTAGGACACCTCAC 58 NA Drosophila melanogaster 61 Prosap FBgn0040752 FBtr0087601 2 1 1 80 2R 9951533 9951551 GAACACCAAGCTCAACGAG 59 9951407 9951490 GAACTACTCCCACTAGCCTG 59 NA Drosophila melanogaster 61 CG13350 FBgn0033890 FBtr0087606 2 1 1 60 2R 9868813 9868833 CGAGAAACGTCAGATAGTCCA 59 9868773 9868792 ATTGGTCATGGGATAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964,FBtr0301591 3 15 15 80 2R 9758069 9758090 TCTTCTGTATCTGAAGGATGTG 57 9757944 9758029 TTCATGTACTTGAGGAAGCG 58 NA Drosophila melanogaster 61 CG6191 FBgn0027581 FBtr0087678 3 1 1 80 2R 9470347 9470368 TCCATCTTTGAGAACCAAATGG 59 9469356 9470307 CTCATAAGTGAAGCACCTCG 58 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 1 3 3 80 2R 9407577 9407595 GTCCATGCAACAAGGATGG 59 9407451 9407535 GGTAATAGGTCTCGTTCTCCT 58 NA Drosophila melanogaster 61 CG4646 FBgn0033810 FBtr0087764 1 1 1 187 2R 9107380 9107457 AGTCGAATGCTCCCTACAC 59 9107211 9107229 CTTCTGGTCGTACTCCACC 59 NA Drosophila melanogaster 61 CG34312 FBgn0085341 FBtr0112510 1 1 1 80 2R 9097614 9097633 TTCATTTATGTTTGCGTCGC 58 9097450 9097573 GTAAATGGCTACACCAAATCC 57 NA Nonspecific Drosophila melanogaster 61 lat FBgn0005654 FBtr0087768 1 1 1 80 2R 9091864 9091882 GTCAGCAGCAAGATTCGTC 59 9091743 9091822 CAGAACTTTATCCAGCACCTC 58 NA Nonspecific Drosophila melanogaster 61 seq FBgn0028991 FBtr0100501 2 1 1 92 2R 9072339 9072358 TCAAACTACGGCCAGTAGTC 59 9070724 9072284 GTTGTGACCACATTGTCGG 59 NA Drosophila melanogaster 61 CG33798 FBgn0053798 FBtr0091802 3 1 1 82 2R 8881824 8881845 CCGTTACTAAGTTCATCTTCGG 59 8881883 8881977 CATAATTATGTCATGGTCGTAGGG 59 NA Drosophila melanogaster 61 CG8646 FBgn0033763 FBtr0301237 1 1 1 85 2R 8544888 8544974 GATGATTTGGGCTTCAACGA 59 8545022 8545040 ATGCCAGAATAGGCCAAGG 59 NA Drosophila melanogaster 61 CG8778 FBgn0033761 FBtr0087880 2 1 1 86 2R 8539595 8539613 GGAGCGGATTTGAAAGAGC 59 8539464 8539482 AATGGCAATAAGCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 1 2 2 80 2R 8309523 8309597 GTGCTAGATGATGCAACCT 57 8309461 8309480 ATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 Cpr49Ab FBgn0050042 FBtr0087914 1 1 1 95 2R 8266533 8266606 TCACTATCTTTGGGAAACTGAG 57 8266662 8266680 AATCCCTTGGAACGAAGTC 57 NA Drosophila melanogaster 61 CG30203 FBgn0050203 FBtr0273303 2 1 1 87 2R 8199347 8199365 CAATTGTACGTGGCTGGAG 58 8199412 8199481 ATCTGAGGACATATACGATGGTC 59 NA Drosophila melanogaster 61 Mtor FBgn0013756 FBtr0088033 2 1 1 93 2R 7746908 7746926 GACTCTACCTCAGGCTGAG 58 7746982 7747057 AATCTCCACAGAGCTTTCGT 59 NA Drosophila melanogaster 61 S2P FBgn0033656 FBtr0088063 1 1 1 81 2R 7731326 7731395 CGCTTCTTCAAGAGTTGCA 58 7731263 7731287 GGAGGCTCATGAAATTTATACTCAG 59 NA Drosophila melanogaster 61 CG13192 FBgn0033653 FBtr0088031 1 1 1 91 2R 7713841 7713859 GATGTGATGGAATTGGCCC 59 7713914 7713995 ATCAACTTGTCGGTTGGAC 58 NA Drosophila melanogaster 61 Cpr47Ea FBgn0033597 FBtr0088190 2 1 1 132 2R 7140325 7140343 CAGTTTCATTCAGGCGCAG 59 7139940 7140233 TGTCTCGTAGTTGTACTGATAGG 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0113356,FBtr0113357,FBtr0088242 3 4 4 109 2R 6730659 6730677 GAACGTCATCGTCTTTCCC 58 6730476 6730588 GGAATGGAAGTCTCCAATGTC 58 NA Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224 1 1 2 127 2R 6707496 6707582 CTCTACAAGAGCTTTAAGAATGGC 59 6707668 6707686 CCAGATTGCACATAAGCCC 59 NA InUTR Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 2 2 2 80 2R 6706100 6706119 AATGGTCACAATCAGAGCTC 58 6705984 6706062 CGGAGTATCTCCATAATTATTCCG 58 NA Drosophila melanogaster 61 CG15863 FBgn0033467 FBtr0088441 1 1 1 95 2R 5847204 5848285 CGTTCTGGTAAACCAAATCTG 57 5847129 5847150 CCTCGGTCTTGGTTATTATCTC 58 NA InUTR Drosophila melanogaster 61 CG18446 FBgn0033458 FBtr0088376 1 1 1 141 2R 5760552 5760570 CAAAGTATCAACCGGCCAG 58 5760672 5760755 CATAGATCCGGATTGAAGTAGG 58 NA Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 2 1 1 93 2R 5636338 5636412 CTTTCAATCGCCCATTCGG 59 5636466 5636487 CAAACAGTGTTTCATTGTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 shrb FBgn0086656 FBtr0088623 2 1 1 60 2R 5030597 5030615 TGACCACGATGAAGAATGC 58 5030497 5030575 TCCACGTCCATATTCTGATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0088627 3 1 4 86 2R 5013707 5014539 TTTGCAATACTAATCCGGCT 57 5013526 5013544 TGAATCCCTTATAGGCGGT 57 NA Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 3 2 2 82 2R 5002674 5002749 AGGACGAATTACTTGTTCGAG 58 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 CG8777 FBgn0033376 FBtr0088565 2 1 1 81 2R 4990143 4990222 CATCCTGATAAATGAGGGTGC 58 4990265 4990283 CAGACTTCGGGAATTGGGA 59 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385,FBtr0273384 3 2 2 94 2R 4858296 4858382 ATTGTCAGCCTGGATTCCT 58 4858220 4858238 ATTCTTGGTCACTGAACGC 58 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 3 1 1 64 2R 4788345 4788415 CAGAGACCAATGGCAAAGC 59 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13751 FBgn0033340 FBtr0088644 2 1 1 252 2R 4787747 4787769 ACTTTATCGAGTGTACCCTACAC 59 4787981 4787999 CAGGAGCGATTTGAGAAGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG30369 FBgn0050369 FBtr0088795 2 1 1 63 2R 4146917 4146935 GTCCTTTGGTCGAGTTCTC 57 4146962 4146980 ATGCAAACTTCTGTTCCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 2 2 2 181 2R 4020284 4020455 GCGTCAAATAAAGGTAATGTCG 58 4020662 4020680 AAGGAGCGTAGTAATTGGC 57 NA Drosophila melanogaster 61 Socs44A FBgn0033266 FBtr0088784 3 1 1 86 2R 4015689 4015707 CCGGAAGAAATGGCTTGAG 58 4015756 4015837 CACACTTGGTTGAGCATCTC 59 NA Drosophila melanogaster 61 CG30496 FBgn0050496 FBtr0088926 3 1 1 60 2R 3588772 3588790 TTACAAGGCGTACAAGGAG 57 3588811 3588832 CATTAGTTCATCATCCGAAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11145 FBgn0033168 FBtr0089004 3 1 1 81 2R 3315585 3315667 GAAGTATCTCCTTCGACTATATGC 58 3315527 3315545 GTAGGGATCGAAGGACTCC 58 NA Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 2 1 1 62 2R 2923097 2923115 CATCATTGCGATCTTCGGC 59 2923139 2923549 TATATGAGGAGCCTCACAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)NC136 FBgn0033029 FBtr0086062 2 1 1 82 2R 1548364 1548382 TGTTCAAGGCCAATCTGTG 58 1548241 1548321 TTTCCAGGAGTGATGTATTGTG 58 NA Drosophila melanogaster 61 His-Psi:CR31615 FBgn0051615 FBtr0085890 1 1 1 60 2L 21405190 21405211 GAGAATTATTCCGCGTCATCTG 59 21405231 21405250 CAGCTTGTTTAACTCCTCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 2 2 2 80 2L 9789412 9789431 CCTCTACTGACAGATGACCA 58 9789291 9789371 AACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 CG10834 FBgn0032972 FBtr0085943 1 1 1 60 2L 22107047 22107066 ATTTGGATGCCAGCAATGAG 59 22107006 22107024 ATCACCTCGTGAACCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33863 FBgn0053863 FBtr0091867 1 1 1 60 2L 21534917 21534935 CGCTCAGGACTTTAAGACG 58 21534959 21534977 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33885 FBgn0053885 FBtr0091889 1 1 1 60 2L 21494423 21494441 CGTAATTCGTGATGCCGTG 59 21494381 21494400 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12050 FBgn0032915 FBtr0114615 3 1 1 80 2L 21101006 21101025 ACTCTGGTACTAAATGGCCG 59 21100881 21100963 CACGCGAAGATTGTACAGC 59 NA Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290306 3 1 2 123 2L 20968797 20968815 CACATGTGCGCTCTAAACC 59 20967652 20967672 CTATGTGCTTGTTGTACTCCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9338 FBgn0032899 FBtr0081428 2 1 1 123 2L 20865472 20865491 TCAAGTCAGACAGTAGCCTC 58 20865577 20866945 TTACCGGGAATGTCGATGG 59 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 1 2 2 146 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813551 20813569 CGAGTTCTCCTTTCAGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 3 3 3 89 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733055 19733168 GTCTAACGAGCATATCTTGCA 58 NA Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 2 2 2 91 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542982 19543632 TCTTTATCAGCGTCGATCCA 59 NA Drosophila melanogaster 61 CG10166 FBgn0032799 FBtr0081279 2 1 1 90 2L 19526011 19526029 GAACGGCCTACATACATGG 58 19525871 19525960 GGAATGAATTTGGGATGATGAC 57 NA Drosophila melanogaster 61 CG10195 FBgn0032787 FBtr0081286 3 1 1 101 2L 19483501 19483519 TGGAATTTGCCATCAAGCG 59 19483354 19483436 AGTCATCGCCAGGTAAGAC 59 NA Drosophila melanogaster 61 Aats-asn FBgn0086443 FBtr0081162 1 1 1 85 2L 19131681 19131810 TGAGTTAACCTTGGGTGCA 59 19131614 19131632 TCTTGAAGGGCTTGGACTC 59 NA Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081169,FBtr0081170 2 2 2 94 2L 19080485 19080568 CAACATAGATCAAGCGGTCG 59 19080410 19080428 AATCGTTGCTCAGATCGGA 59 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 3 3 3 87 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067438 19067458 GTGATCCGGAAATAACATAGC 57 NA Drosophila melanogaster 61 CG10348 FBgn0032707 FBtr0301647 3 1 1 60 2L 18716368 18716389 CCTGCCTTAGGATTAATACCCA 59 18716329 18716347 AGGAGGCCAGATCATAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10373 FBgn0032704 FBtr0081127 1 1 1 60 2L 18705116 18705137 AAGATTATTACTGGTCTGCTGG 58 18705077 18705096 TGAAGAACTGCCAGATAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42400 FBgn0259819 FBtr0300108 2 1 1 80 2L 18164980 18165001 TGGTCATGGTCAACTTCTACTC 59 18163956 18164940 GATTAATATGCGCGACTGCA 59 NA Drosophila melanogaster 61 CG15153 FBgn0032663 FBtr0081045 3 1 1 82 2L 18091254 18091480 CAACGAGATAAGCTACAAGATCAC 59 18091195 18091213 AATCGGTGTCATAGGCAGG 59 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 3 2 2 81 2L 17383512 17383530 AAGCTGAAGGACTTTCCCA 58 17374728 17383472 CAAATCTATTCCGGGAAAGATCTG 59 NA Drosophila melanogaster 61 CG17928 FBgn0032603 FBtr0080908 2 1 1 82 2L 16792205 16792223 ATGACACTGAAGCGGAGAG 59 16792268 16792383 CCAAGATGGAGAAACTCGGT 59 NA Drosophila melanogaster 61 CG4455 FBgn0028506 FBtr0080836 3 1 1 172 2L 16353102 16353120 GCAGTTCGTACCTGTTGTG 59 16353334 16353352 GAATGTGGAGATTCCGGGT 59 NA DesignNoJunction Drosophila melanogaster 61 beat-Ic FBgn0028644 FBtr0080801 1 1 1 123 2L 16034309 16034583 AAATGGAGGTGGTTGAGCT 59 16034670 16034688 AAATTAGCAGCCGGTTTCG 59 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 1 2 2 83 2L 15895694 15895768 GAGTCATACTTTGTCGAAGAGG 58 15895869 15895887 GATCAGATGCACAGTGGTC 58 NA Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089700 1 1 2 80 2L 15486432 15486451 GGAGTTCCGACATATGTGAG 57 15486492 15490707 AACTATTAGCTTCGACTTCGC 58 NA Drosophila melanogaster 61 l(2)35Cc FBgn0259982 FBtr0080708 1 1 1 67 2L 15256666 15256686 AAACACAACACAGAAGCTCAC 59 15256766 15256784 TCAATTTGGGTGATTCGCG 59 NA DesignNoJunction Drosophila melanogaster 61 yellow-c FBgn0041713 FBtr0080699 2 1 1 60 2L 15036984 15037062 CGAATATTGTTGTGGATGCG 58 15037085 15037103 TCCGGAATGTAAGCAAAGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0300845,FBtr0080685 2 3 3 80 2L 14845462 14845484 GATCTATTTCTATGCGACCTACC 58 14845349 14845424 AGCCAACCAATTGAGTAAGAC 58 NA Drosophila melanogaster 61 CG18636 FBgn0032551 FBtr0080688 1 1 1 80 2L 14784159 14784243 TGCAAATCAGCATTTAGTAGCC 59 14784100 14784121 AAATTGCAGTAATATCCGGTGC 59 NA Drosophila melanogaster 61 Cpr35B FBgn0028871 FBtr0080633 2 1 1 60 2L 14424840 14424860 TGAGTATGACTTCCAGTACGG 59 14424800 14424819 ACTCTGTGACTTCACATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr35B FBgn0028871 FBtr0080633 1 1 1 60 2L 14424479 14424498 ATTCGCTGAAACAGGAACAC 59 14424438 14424456 AAACCATGATCCTGACCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 1 2 2 80 2L 13908582 13908661 GTATCTGAGATACTTGGTCTCCT 58 13908701 13908719 GGATCATATTGGCCAGCCT 59 NA Drosophila melanogaster 61 CG31813 FBgn0051813 FBtr0080531 2 1 1 82 2L 13736328 13736346 AACAAGGAAGACTCCGAGC 59 13736391 13736410 CCCTCCAGTCTGTCATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9014 FBgn0028847 FBtr0080579 3 1 1 140 2L 13723180 13723198 GATCAAGTGCACCTTCTCG 58 13723000 13723077 TCCTTGGGTACCTTCATTCC 59 NA Drosophila melanogaster 61 CG5287 FBgn0032477 FBtr0080436 2 1 1 80 2L 13180029 13180049 TAAACTATAACTCCACGACGG 57 13180089 13180169 ACAAGGCACCTATATTCAAGG 58 NA Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 2 2 2 99 2L 13164197 13164327 CCCTTCGATACGACCTGTC 59 13164116 13164135 TCTGCTCTACGAAACCACTG 59 NA Drosophila melanogaster 61 CG5142 FBgn0032470 FBtr0301366 3 1 1 80 2L 13108562 13108580 AGGGCGACAAATACAACGA 59 13108620 13108909 CAGAAACGGACATGATATCATCC 59 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 3 2 2 152 2L 12693402 12693483 TCTTCAAGAACCGACCCAG 59 12693599 12693617 TGGGAAAGTAGAGGGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16996 FBgn0032412 FBtr0080334 2 1 1 60 2L 12109977 12109997 TGATCAATGACTTGTACACCG 58 12110019 12110037 GGCGTGTAGATCATTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dgt2 FBgn0032390 FBtr0080285 2 1 1 126 2L 11990197 11990215 CATTGGAAGTTATGCGCGA 59 11990362 11990380 CAATTTGGTACGCACCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14934 FBgn0032381 FBtr0080275 3 1 1 81 2L 11848349 11848369 ATTCGGTGAGAAATCTGTGGA 59 11848407 11848489 CTCCTCGCCATTATAAGTAATACC 58 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 5 6 101 2L 11835159 11835177 CGAATATGTCGTTCACCGC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 lectin-33A FBgn0040096 FBtr0113317 3 1 1 118 2L 11002194 11002267 GTATCTTTGCAGGAGGCCA 59 11002347 11002367 CTCTTTAGGAACGTGGTTGTG 59 NA Drosophila melanogaster 61 Stam FBgn0027363 FBtr0080143 3 1 1 80 2L 10859570 10859588 CATTTGGAGGTGGCTTCAC 59 10859631 10859709 TTTCAGTGAAACCTTTGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG17108 FBgn0032285 FBtr0080127 2 1 1 65 2L 10693483 10693501 GATTTGGTGGAGGAATCGG 58 10693436 10693456 CTCCACCAATAACTCCAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7294 FBgn0032284 FBtr0080128 3 1 1 65 2L 10689175 10689195 TGAAGACTCTGATTGTTCTCG 57 10689130 10689149 CGAATCCAAATTGCGGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grip75 FBgn0026431 FBtr0080033 1 1 1 80 2L 10483558 10483578 GGTTTACCAAGAAGTTGAGCA 59 10483618 10483696 TGCAAACTATCTGGAAGTTCG 59 NA Drosophila melanogaster 61 CG5367 FBgn0032228 FBtr0080055 2 1 1 81 2L 10355000 10355079 TTTCAACTGTACAGTGACGG 58 10354938 10354956 AACCAATTACCACCATGGC 58 NA Drosophila melanogaster 61 GATAd FBgn0032223 FBtr0079993 1 1 1 98 2L 10335912 10336027 AAATCTGAGACCAGACCCA 57 10336089 10336107 CTTAACTCCGTCAGAGCCT 58 NA Drosophila melanogaster 61 CG5390 FBgn0032213 FBtr0080064 2 1 1 80 2L 10304763 10304839 AGTAGCATTGTTGTGAGAGC 58 10304702 10304721 CTTGACATATCGGTCTTCGT 57 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079952 1 1 2 81 2L 10232590 10232608 GGACAAATTCTGGGCTGAC 59 10232653 10233492 GCGATCAGTTACCTTCTGG 58 NA Drosophila melanogaster 61 CG4901 FBgn0032194 FBtr0079947 3 1 1 81 2L 10212333 10212353 CGTGTTGATATTCCTAACCGG 59 10212396 10212479 AGTCGTGTCAATCTTGGCA 60 NA Drosophila melanogaster 61 CG13127 FBgn0032176 FBtr0079933 3 1 1 60 2L 10028543 10028562 AGATCGCTATGGTAAGTCGT 58 10028584 10028603 GAACGAGGTCTTCACAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bib FBgn0000180 FBtr0079929 1 1 1 80 2L 9992398 9992417 AGAAGTTCATGGGCAATTCG 59 9992460 9993282 GATTCAGGTACGGCATCGA 59 NA Drosophila melanogaster 61 yip2 FBgn0040064 FBtr0079876 1 1 1 179 2L 9915778 9916056 GAAATGTGATCGCGTCCTC 59 9916199 9916217 TAAGGGCTATCTTGGCACC 59 NA Drosophila melanogaster 61 CG4364 FBgn0032138 FBtr0079848 3 1 1 107 2L 9710713 9710793 CGTGACTACAAGATCTTTGC 57 9710625 9710644 GTGATCGAGTTTGATTTCGG 57 NA Drosophila melanogaster 61 FucTB FBgn0032117 FBtr0079811 3 1 1 80 2L 9430066 9430087 CTGATGAAACATCTTCCGATCG 59 9429574 9430027 GTAATCCTTCTGCAAGCTCTC 58 NA Drosophila melanogaster 61 Try29F FBgn0015316 FBtr0301665 2 1 1 60 2L 8998818 8998836 TTAATCGCTCAGGGTTGGG 59 8998858 8998878 AGAGTATCGCAGATCCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 1 2 2 80 2L 8940304 8940322 AGACGATTCAGGTCAAGCA 59 8940185 8940260 CCAGATAGTAGGCCCAGTC 58 NA Nonspecific Drosophila melanogaster 61 CG17294 FBgn0032032 FBtr0079651 2 1 1 85 2L 8377779 8377853 GTTATGATTGGAGATGATGCCA 58 8377899 8377917 TATTTGCCGGTCTTGACCA 59 NA Drosophila melanogaster 61 CG14532 FBgn0031966 FBtr0079555 2 1 1 60 2L 7900006 7900027 AAGAAATGCAGATGAAGCTGAC 59 7899967 7899985 CATTGAACATTGCACCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34132 FBgn0083968 FBtr0110879 3 1 1 145 2L 7885669 7885689 CAAAGGTGAACTTATGGACCA 58 7885795 7885886 AAATGCATTTCTGTTCGGAC 57 NA Drosophila melanogaster 61 CG18591 FBgn0031962 FBtr0079560 2 1 1 60 2L 7885179 7885202 GGATTCGATGAGTACATGAATCTG 59 7885142 7885162 GGGTCTTCACATAGACTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4567 FBgn0243517 FBtr0079413 3 1 1 101 2L 7220815 7220834 TATCATCACCGGAACTGAGG 59 7220669 7220752 GTACTCGATCTCAGCTCTCC 59 NA Drosophila melanogaster 61 Nuf2 FBgn0031886 FBtr0079424 2 1 1 93 2L 7065479 7065500 ACAAGACGTACACCTATATGGA 58 7065347 7065365 TTGTAGTAGGCCAGATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0113027 2 1 2 100 2L 7012421 7012444 CAGTTATACCCGGCATTATATTGG 59 7012503 7013667 GATGCGGAAGCATTCATCG 59 NA Drosophila melanogaster 61 xl6 FBgn0028554 FBtr0079368 1 1 1 188 2L 6919682 6919700 AAAGTATGCTAGGTCCGGC 59 6915389 6919530 AATGAGTTGCTTCTGCGTC 58 NA Drosophila melanogaster 61 l(2)k09022 FBgn0086451 FBtr0079343 2 1 1 156 2L 6855400 6855531 TCAGCAACTGATCAATTGCT 58 6855650 6855668 ATACCAGGCTTGAAAGGTG 57 NA Drosophila melanogaster 61 CG31636 FBgn0051636 FBtr0079324 3 1 1 94 2L 6657367 6657445 CGTAAGAATGGGAGTACTCCT 58 6657293 6657311 TGCTCGTATCGTAGGAACC 59 NA Drosophila melanogaster 61 CG9507 FBgn0031808 FBtr0079255 1 1 1 60 2L 6381679 6381697 CGACTCTACTACCGTTCGT 59 6381721 6381739 GCTGCAGGTACTTCTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42368 FBgn0259714 FBtr0299967 3 1 1 80 2L 6391341 6394852 CCTGGGATCCTATAAGGTCG 58 6391280 6391298 TTACGCGTTATCACGTGGT 59 NA Drosophila melanogaster 61 slam FBgn0043854 FBtr0290281 3 1 1 89 2L 6375232 6375250 AGTTACCTCCAGTGCATCC 59 6375303 6375387 TCGTCGCTGGTTATCTTGG 59 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251,FBtr0079250 1 2 2 80 2L 6344875 6344894 GCTCGCTGAGTATTGTACTG 58 6344937 6345040 TTCTCCTTTCCTTCGGGAC 59 NA Drosophila melanogaster 61 Muc26B FBgn0040950 FBtr0079203 3 1 1 115 2L 6152055 6152138 ACGCCATAGTAATTGCATGTG 59 6152215 6152233 ATAACGGCGGTAGAGTTGG 59 NA Drosophila melanogaster 61 CG9222 FBgn0031784 FBtr0079201 1 1 1 111 2L 6131674 6131751 CGAGACCAGTCATAGGGTG 59 6131826 6131844 GAATAGCGTACGTGACTGC 58 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 3 2 2 88 2L 6097245 6097321 GTCCCAAAGACGTACAATCC 58 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 3 2 2 138 2L 6051893 6051911 AGAGAAGACTCCAGGTCAG 57 6052010 6052088 ATATCGGTACTTCTCTTCTGTG 57 NA Drosophila melanogaster 61 CG8965 FBgn0031745 FBtr0079158 1 1 1 80 2L 5861303 5861322 ATCGAGTACAAGACCCTTGG 59 5861170 5861260 CATCTTGAGGCGTCTTAGC 58 NA Drosophila melanogaster 61 CG14006 FBgn0031733 FBtr0079167 3 1 1 60 2L 5728721 5728739 TGCTCGCTTTCGTTATCCT 59 5728679 5728698 TTATCCCAGTTCACGAACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 2 2 2 102 2L 5547903 5547981 GTGCCGACAGATACTTCGT 59 5548046 5548065 TGAAAGGATACCTTGCCCTG 59 NA Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 1 2 2 82 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872352 4872512 AGAAATTGTCGTTCCCGGA 59 NA Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0110812 1 1 2 72 2L 4456425 4456443 AACAAAGTGCTGCGAAAGG 59 4456061 4456389 ATATCCTCTCCGTGTCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dim1 FBgn0031601 FBtr0077435 3 1 1 81 2L 4403343 4403363 TATATGCTCCCTCATTTGCAC 58 4403403 4403523 AACGTATTACAACTACTCGGTC 58 NA Drosophila melanogaster 61 lectin-24Db FBgn0040102 FBtr0077469 3 1 1 60 2L 4188926 4188946 TAGACTTCTGTCGTGACATGG 59 4188968 4188986 TCCAGCTCCTCTTGATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-24Db FBgn0040102 FBtr0077469 2 1 1 60 2L 4188962 4188981 CCATCAAGGATCAAGAGGAG 57 4189004 4189022 CAGTAGCTCTTGTCGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-24A FBgn0040104 FBtr0077539 3 1 1 60 2L 3717000 3717021 AAGTTGTTTGTATCACGAGTGG 59 3716961 3716981 TCGCTCTTGGTCATTATTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 81 2L 3624268 3624291 CAGCTAATTTCCAATCTAGACGAG 59 3623868 3624230 ATTCCTCGTTGATCTTTCTGC 58 NA Drosophila melanogaster 61 Sr-CIV FBgn0031547 FBtr0077560 1 1 1 162 2L 3523273 3523291 TCCTATCGCCACTGTATCC 58 3523063 3523147 TCGAACTTGTAGGGATGGT 58 NA Drosophila melanogaster 61 CG8840 FBgn0031531 FBtr0077590 1 1 1 60 2L 3410890 3410908 GGACATAGACTACTGGCGT 59 3410932 3410950 CCCATAGCGATTGTTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34175 FBgn0085204 FBtr0112366 2 1 1 61 2L 3398316 3398334 ATCCTCCTTGCAAAGAAGC 58 3398354 3398377 CTCTTTATTCTCGGACTTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15404 FBgn0031512 FBtr0077578 1 1 1 85 2L 3174170 3174190 ACTGGGTACTTACATGTCCTG 59 3174234 3174320 GGGCAATCTGAACAAATTTAGC 58 NA Drosophila melanogaster 61 CG9643 FBgn0031485 FBtr0077675 3 1 1 60 2L 2978694 2978714 TGACAGCCTGTTTGTAATCAC 58 2978654 2978672 AAAGCTATCCACCAGCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692,FBtr0077691 1 2 2 82 2L 2837277 2837354 TGACGATACGTACGTGGTC 59 2837213 2837231 TGTAGCCAAAGAAGACGGG 59 NA Drosophila melanogaster 61 CG9870 FBgn0031422 FBtr0077768 3 1 1 101 2L 2383957 2383977 TCTTCATACTGGGATTCACGA 58 2384037 2384111 GAAGGAATAGCAAACCTATTGC 57 NA Drosophila melanogaster 61 CG15382 FBgn0031393 FBtr0077832 1 1 1 60 2L 2155787 2155808 AGTACCGCATGTTGAATAAACG 59 2155829 2155847 GCGTCGGAATCTCTTACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 2 2 2 80 2L 2143971 2143990 AGAGCTAAACCAGGAGTTCG 59 2143840 2143929 TTGAAGCAGCCTATAAGGGA 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 3 6 6 127 2L 1500033 1500122 CCACTCAAGTCAACATATCCAG 58 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 3 1 1 98 X 21064961 21065098 CATCTTCTTGCTAATTAGGATCGTC 59 21065152 21065172 TGATAATAGGCTCTGCTCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14407 FBgn0030584 FBtr0073989 3 1 1 84 X 14731898 14731916 CAGATTATGCGGATGCACG 59 14731772 14731850 TGTAGTCCTTGACACCCTG 58 NA Drosophila melanogaster 61 g FBgn0001087 FBtr0073842 1 1 1 80 X 13627857 13628685 GTTGACCTACATACAAATGCTG 57 13627798 13627817 AATCTGGATGAGCTCATCAC 57 NA Drosophila melanogaster 61 CG9940 FBgn0030512 FBtr0073844,FBtr0073845 1 2 2 80 X 13580652 13580672 GCGGACATTAATCCTATTGGT 58 13580526 13580612 CAGGTTGAATTTATCCTTGGC 57 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 3 4 4 82 X 12550118 12550137 CTGAACTATTGTCGTAGCCT 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 3 1 1 94 X 11022096 11022201 CAGAACATCAACAGCGAGC 59 11022020 11022038 GATGCATCCTCGTTGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2962 FBgn0030186 FBtr0071486 1 1 1 214 X 10110147 10110592 TCAGCATGAAGGTCTTCGT 59 10109951 10109969 ATGGATCACCTTGACCACC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 MtnB FBgn0002869 FBtr0083890 2 1 1 67 3R 16329157 16329236 GTGGAACAAACTGCCAGTG 59 16329108 16329126 CTGGCAATCCTTGTTGCAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 beat-IIa FBgn0038498 FBtr0083453 2 1 1 107 3R 13158292 13158310 TAAGTTCTACCGTGGCCAG 59 13156862 13158221 TTGGAGCTGCTTACATCCA 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083055 2 1 6 96 3R 11068897 11070093 GGTTGAGTGAATGTCTAAAGCT 58 11070150 11070168 GATGATCTCGACCTTGCCA 59 NA InUTR Drosophila melanogaster 61 CG3916 FBgn0038003 FBtr0082560 2 1 1 77 3R 8055761 8055779 TGACTCGGAACGAGATCTG 58 8055879 8055898 TAATCAAGGGTCCACCAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 2 4 4 83 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264018 7264036 GTCTAGCTTCATGGAGGCA 59 NA Drosophila melanogaster 61 CG1234 FBgn0037489 FBtr0081599 2 1 1 82 3R 3070868 3070945 GAAGGATTGGCAGAGTTTGC 59 3070805 3070824 TCCTCTAGAATGCGGTTGAG 59 NA Drosophila melanogaster 61 Jarid2 FBgn0036004 FBtr0076468 2 1 1 80 3L 9478085 9478168 GATGATTTCAGGGACATTCACG 59 9478207 9478227 GTCATAACCCAAGGCAAAGAG 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076543 2 1 6 159 3L 9055562 9057577 GTCGATGAAATACGCAAACG 58 9055422 9055440 GAGCAGGTGGTACTACAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Rab-RP3 FBgn0015793 FBtr0076705 1 1 1 84 3L 8291096 8291114 GTTCGTGATGGAGACCTCC 59 8291161 8291228 GTGTTGGCGTTTAAGTTCGT 59 NA Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 3 2 2 74 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466963 CATATAGTAGACGGCCAGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 1 2 2 105 3L 2154400 2154489 GAAGCATTGAGGATTGGCA 58 2154313 2154332 GCTGTTTGAAAGGATGAGGA 58 NA Drosophila melanogaster 61 gammaSnap FBgn0028552 FBtr0072187 1 1 1 80 2R 19935377 19935463 GGTCAAACTAAGGAGGTACGA 59 19935317 19935336 CCGTAAGATTCCGTTTGCTG 59 NA Drosophila melanogaster 61 CG13560 FBgn0034899 FBtr0072088 1 1 1 66 2R 19635402 19635420 GTACGGGATCAACCACCTC 59 19635450 19635468 GGAGACGGATTAGTCGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17807 FBgn0034748 FBtr0071938 1 1 1 60 2R 18522574 18522593 AATAATGTCGGGTGAAGCTC 58 18522533 18522551 ATCAATGTGCTTCGGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 CG18368 FBgn0033864 FBtr0087627 3 1 1 60 2R 9555402 9555420 GTCTGTCATCAACCCAGTC 57 9555441 9555462 CAGATCCATTGCTCTTTACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zetaTry FBgn0011556 FBtr0088164 1 1 1 60 2R 7227239 7227259 GTCAAGGAGATCGTTATGCAC 59 7227199 7227219 CAATATCGTTGTTGTAGGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 1 5 5 105 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 CG9246 FBgn0032925 FBtr0081472 2 1 1 105 2L 21164687 21164764 ATAACCAGGAAACAGCAGG 57 21164833 21164851 TTCCTGGTAAAGTGTTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 2 1 1 137 2L 18615746 18615764 GCAGTGTTCAAATGGAGCC 59 18615502 18615645 TTTGGAACATTCGACGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Tap42 FBgn0051852 FBtr0080466 3 1 1 84 2L 13367834 13367925 CAGCGAATTTCAGAACAAAGTG 59 13367969 13367988 ACTGAACATGCTAACCTGGT 59 NA Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 2 1 1 62 2L 4968474 4968492 CACTGCCCGGATATTTGTC 58 4968367 4968448 TTCAACTTCATCGACGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3513 FBgn0031559 FBtr0077549 3 1 1 164 2L 3693145 3693163 GTATATCGGCTTTGTCGCC 58 3692938 3692956 GAGGCATCATAGGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085,FBtr0078086 2 2 2 60 2L 462815 462837 CTTTATGTACGAATCTCTGCCAC 59 462777 462795 TTGATGATCCACGACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11912 FBgn0031248 FBtr0078099 3 1 1 60 2L 318516 318534 CTGATTGGCATCGTCTCCT 59 318474 318494 ATACGGAAGGATAGGTTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 CG9791 FBgn0037232 FBtr0273009 1 1 1 80 3R 139440 139459 CCAAGACGATATTGGACCTG 58 139502 139574 TGAACCGATAGCTTAGCCA 58 NA Drosophila melanogaster 61 CG8027 FBgn0033392 FBtr0088609 1 1 1 91 2R 5092884 5092964 CTAATTTGCCTACAATAACCAGGG 59 5092816 5092834 ATATTTGGGTCGGACTGCA 59 NA Drosophila melanogaster 61 CG12836 FBgn0033140 FBtr0089037 2 1 1 81 2R 2955806 2955826 AGTGGATTTATGATAAGCGGC 58 2955869 2956096 CTGCTATCTGCACAGATGC 58 NA Drosophila melanogaster 61 CG5213 FBgn0038345 FBtr0083148 3 1 1 60 3R 11320653 11320671 ATCCTCAACTACCTTCCGC 59 11320695 11320713 ACTTGGAGAAGAGACGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir87a FBgn0038153 FBtr0082784 3 1 1 85 3R 9247597 9247616 GTTAGCATCGAAATGCAGGG 59 9247659 9247779 CCGACTATCATCTCTATTTCACCA 60 NA Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081590 1 1 2 60 3R 3187356 3187377 TCCACGAAAGTAGATTGTTCAC 58 3187317 3187335 TGGAAGTACAGTTGAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dlt FBgn0024510 FBtr0072790 1 1 1 138 3L 1793498 1795214 AGATTGCCATCAAAGTGGA 57 1793378 1793398 GTCATTTCTGTATCTGACGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41602 FBgn0085813 FBtr0114268 2 1 1 61 XHet 194865 194886 GTAGGAAGGTACAATGGTATGC 58 194908 194926 CAATGGCAGTTCCATGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113721 3 1 3 86 XHet 69223 75534 GTCACATTGGATCCGACGA 59 69155 69173 CGTTGTAAGTCTCGTCGGA 59 NA Nonspecific Drosophila melanogaster 61 CR32657 FBgn0052657 FBtr0073625 3 1 1 114 X 11981447 11981465 TTTATAGCTCCGGCAACAC 57 11981601 11981619 ATCGATGCAAGCTACTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 1 2 2 80 X 20347079 20347097 GTGAAGCTGGAGATCAAGG 57 20346947 20347038 AAGTTCTATCACATTGTGCTCC 58 NA Drosophila melanogaster 61 CG9570 FBgn0031085 FBtr0070002 3 1 1 67 X 19946055 19946074 AAATCCTGATGAAGTGCAGC 59 19946104 19946122 GTTAGCAATCAGTGGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290276,FBtr0290275 1 2 2 87 X 19019674 19020053 TACAATCCGAGATCGTGCA 58 19019605 19019623 AGTCGTACACGTACAGCTG 59 NA Drosophila melanogaster 61 CG15865 FBgn0015336 FBtr0074375 1 1 1 191 X 16558027 16558047 CAATTGCTTCTGGGTATCCAG 59 16557727 16557874 TGGACTCTTCGAAGATGGC 59 NA Drosophila melanogaster 61 CG6308 FBgn0030645 FBtr0074036 3 1 1 62 X 15366374 15366392 AGACATCGAACAGACGGAG 59 15366418 15366436 GTAGAGTCACTGTTGGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hiw FBgn0030600 FBtr0073970 3 1 1 80 X 14949124 14949143 TTGGCAATGTTAGAGCTCTG 58 14949000 14949081 GTTCATAGCCCTCATCCGT 59 NA Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 1 1 1 111 X 14802804 14802822 TCATTGGAGCAGGATCTGC 59 14802316 14802729 AACTCAGATTCGACGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS25 FBgn0030572 FBtr0073945 3 1 1 69 X 14476807 14476828 GAACTACAACACATATGGTGCT 58 14476696 14476714 GATCTGCGGTATGTTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12480 FBgn0030537 FBtr0073868 3 1 1 60 X 14064578 14064600 ATACACTCCAGCTCATCTTAAGG 59 14064620 14064638 GGCATAGGTATCAGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32613 FBgn0052613 FBtr0073887 3 1 1 171 X 13847250 13861311 TAGTTTAAGGTGAGTGGCG 57 13847097 13847115 ATGGAACTTCAGGCTTTCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 2 3 3 82 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604678 12604697 CTATTGGTCATAGCTGACGT 57 NA Drosophila melanogaster 61 Cyp28c1 FBgn0030339 FBtr0073565 2 1 1 80 X 11734870 11734948 TGCCTGCTTTAATGAAAGCC 59 11734989 11735009 CGAAGTTCGTACTCCTTTGTG 59 NA Drosophila melanogaster 61 CG2157 FBgn0030244 FBtr0073382 2 1 1 116 X 10764128 10764225 GTGGATTAGATGGTGCTGC 58 10764305 10764323 TAAGTCCCGATCCATAGCC 58 NA Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071391 1 1 2 84 X 9778823 9778841 ATTCCAGTGGCCTATGACG 59 9778889 9778976 AAATCCCTCATGGGATCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fend FBgn0030090 FBtr0071349 2 1 1 170 X 9028114 9028134 CTATCGGTATCGGTATCCTCG 59 9021138 9027983 CTTGGAAAGCTGCTGATAGC 59 NA Drosophila melanogaster 61 CG7246 FBgn0030081 FBtr0071353 2 1 1 88 X 8974819 8974896 CAGGTCAGAGAAATCGTTAGC 58 8974751 8974769 ATGAAGTCCAGGTAGTCGG 58 NA Drosophila melanogaster 61 CG2278 FBgn0030017 FBtr0071185 3 1 1 81 X 8062923 8063014 CGAAATGGTTACTTCGGTTCC 59 8062862 8062883 GATACGATTTACAGTCACGCTC 59 NA Drosophila melanogaster 61 Hira FBgn0022786 FBtr0071070 3 1 1 81 X 7618799 7618885 GCATGGAGTTGAGACATTCG 59 7618928 7618947 GCCTCGCATAACTTGATCTG 59 NA Drosophila melanogaster 61 CG15465 FBgn0029746 FBtr0070742 3 1 1 148 X 5059530 5068949 AACCAAGGATAAACCTCTAGAC 57 5069058 5069076 TTTCGTCTCTTGGCTTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 2 3 3 80 X 1185594 1185673 CTATGAGATATCCAAGATTCCGC 58 1185536 1185555 TTGATGGTCAGCATGAAACG 59 NA Drosophila melanogaster 61 CR40596 FBgn0085753 FBtr0114203 1 1 1 60 U 10047468 10047487 CGAATGAGATCTTGGAGGAC 57 10047509 10047528 CGTTATCAACCACTGTTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41608 FBgn0085818 FBtr0114276 1 1 1 60 U 4448070 4448091 GGGACAATATCATATGCGTCAC 59 4448109 4448130 TTATCAAGAGTAGCCAAACACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42428 FBgn0259859 FBtr0300156 3 1 1 153 U 7863495 7863514 CTGATACACAGCCATGTTCG 59 7863628 7863648 CATAGGGACTCCAAGTTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0089139,FBtr0114475 1 6 6 80 4 302513 302589 TCTTCCTTTATGTCAGGTTGAC 58 302454 302472 CCGCATTTATCCTTTGCAG 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3405d FBgn0082957 FBtr0113592 1 1 1 101 3R 24428292 24428310 TCCGCATAGCAATGTTCGA 59 24428375 24428393 ATTGGTGCACAAACACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 3 1 1 66 3R 21095372 21095390 TATTCGCGTCGTATTCCGA 59 21095418 21095493 CAGCATAGAAAGATCTAGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 1 2 2 80 3R 26005220 26005306 GAAACAGCAAGCCAAATAATCC 58 26005344 26005365 AAAGTATCGGATTAACCTTGCG 59 NA Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587,FBtr0085586 1 2 2 91 3R 25953646 25953664 CCTTGCAGTGAGGATAGGG 59 25953522 25953540 GAGTACACGGGATAGGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7946 FBgn0039743 FBtr0085561 2 1 1 80 3R 25879120 25879140 ATCAGTGAAGAAATCCAAGCC 58 25879181 25879279 TCGTTCCGGATGTTATTGAC 58 NA Drosophila melanogaster 61 Obp99a FBgn0039678 FBtr0085450 2 1 1 60 3R 25497638 25497658 GAGAAGTACCAGAAGTGGGAG 59 25497680 25497698 CGCACTTGATGTAGCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 2 4 4 85 3R 25325968 25326047 TGCTATCAGGAAATGTATTCCG 58 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG6277 FBgn0039475 FBtr0085150 2 1 1 192 3R 22848873 22848892 TTTGGCATTCTTTGCTCTGG 59 22848638 22848656 GAACTTTACGGGAACGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095,FBtr0085096 3 2 2 60 3R 22692020 22692038 AGAACTACGATGCTGTGGT 58 22691922 22691940 ATCTCCACGAACAGAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 TwdlP FBgn0039435 FBtr0085058 3 1 1 60 3R 22446895 22446913 CAGTTAGCTATAGTGCCGC 58 22446853 22446874 GCATAGAAGCTGTAGAACTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34129 FBgn0083965 FBtr0110870 3 1 1 60 3R 22016406 22016424 GGTTTCGACAATACGGAGG 58 22016364 22016384 TAGTTACTGTAACGTTTCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hr96 FBgn0015240 FBtr0084756 2 1 1 88 3R 20851912 20851931 CGCATTTGATCGACTATCCA 58 20852049 20852133 TTTGGTGAATACTGTCAGCG 58 NA Drosophila melanogaster 61 CG11089 FBgn0039241 FBtr0084710 1 1 1 87 3R 20706391 20706411 GGAGATCTCTAATGCAATCGA 57 20706459 20706537 CTTATCGAACATTCCCTCGA 57 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 2 3 3 83 3R 19349551 19349633 CTGTTCATAAGAAGACTTCGCA 58 19349489 19349507 CAAATCTTGCGGAACCAGG 59 NA Drosophila melanogaster 61 CG4624 FBgn0039058 FBtr0084401 2 1 1 80 3R 18984327 18984347 CAATCTATTGTCCTTCGAGGC 58 18984200 18984288 TCCTTCGGTATGATATCACTGC 59 NA Drosophila melanogaster 61 CG4813 FBgn0039013 FBtr0084326 1 1 1 60 3R 18551199 18551218 AGAGGGAAATGTTTCCGAGG 59 18551158 18551176 GCTGGAGGAGATAAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0300075 3 1 2 60 3R 17700032 17700051 CAATTCCAGATAGCAATGCC 57 17700072 17700092 GATTGATAGTGGATAACGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083861,FBtr0083860,FBtr0302327 2 3 3 60 3R 15689430 15689451 CTTCAGAAACGCAACTATACCT 58 15689391 15689412 CGGGATTGTCAATGTAGATGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14327 FBgn0038526 FBtr0083465 2 1 1 104 3R 13439672 13439691 AAAGACCTGTGTTGTTTCGA 58 13440099 13440118 AAGGAAACAAATTCCGAGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Patr-1 FBgn0028470 FBtr0083392 3 1 1 81 3R 12869402 12869591 AATCTACCGGACGAAGATGG 59 12869635 12869653 CGGATCCAAAGGTTTCGTC 58 NA Drosophila melanogaster 61 tara FBgn0040071 FBtr0083257 2 1 2 298 3R 12052153 12082510 GAATCCAATGTGAATTCCGC 57 12082769 12082789 TGACCATTGCTAATACTTGGC 58 NA DesignRelaxed Drosophila melanogaster 61 Set FBgn0014879 FBtr0083062 3 1 1 142 3R 11090546 11090566 TGCAGTATTATCTGGTACCTG 57 11090668 11090751 TTACTTGTCATCCTCATCCTC 57 NA Drosophila melanogaster 61 Sp212 FBgn0053329 FBtr0300406 1 1 1 144 3R 10048587 10048608 CTATGATCTGGATGACTACGGA 58 10048246 10048482 GTCGTTAAACGTCACTGGC 59 NA Drosophila melanogaster 61 Nsf2 FBgn0013998 FBtr0082883 2 1 1 85 3R 9663581 9663599 CAAATGCCCAACGGATGAG 59 9663414 9663534 TGTCCACATATTTGACCTCCT 58 NA Drosophila melanogaster 61 beat-Vb FBgn0038092 FBtr0082684 1 1 1 80 3R 8759130 8759153 GGTCAACTGTAGTACAGATTTCTC 59 8759189 8759269 TCCACCAGAGAAACCTTTATCC 59 NA Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 3 3 3 97 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595737 7595755 CAGGTGTGACGAGTAGTCC 59 NA Drosophila melanogaster 61 Gr85a FBgn0045473 FBtr0082216 2 1 1 80 3R 5821421 5821492 GAACCTGGAACGAAGTATCG 58 5821360 5821380 CGAAATACGCCAAAGATAGTG 57 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 3 4 4 95 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401211 5401230 GTTCATCGTTAGCCTATCGG 58 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 1 4 4 93 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 3 5 5 231 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847651 4847669 TCGATGGGATTCTCGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8145 FBgn0037617 FBtr0081911 2 1 1 80 3R 4549066 4549160 CTAATAACCGGAATTCTCCTTCAG 59 4549199 4549217 CGATTGCAGATCTGTCTGG 58 NA Drosophila melanogaster 61 CheA84a FBgn0261290 FBtr0091780 2 1 1 132 3R 4030429 4030501 AAACTTGCGCATTGATTCC 57 4030315 4030334 AATTCGAAAGTGCCATTTGC 58 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0114531,FBtr0091512 3 2 2 122 3R 2972595 2972674 ACTCGAAGATGAATCCGCA 59 2972491 2972510 GATATAGCGTTGAATCCGGC 59 NA Drosophila melanogaster 61 CG42564 FBgn0260766 FBtr0301268 1 1 1 107 3R 2201044 2201068 GGATATCCTTAGGGATATCATAGGG 59 2201133 2202119 TTGTACTTCGGCGACTGAG 59 NA Drosophila melanogaster 61 glob3 FBgn0037385 FBtr0078640 3 1 1 82 3R 1656052 1656121 TCAGGACGTATTCTATAGCTTCC 59 1656163 1656181 CTTTCACGTTGAGCTCAGC 59 NA Drosophila melanogaster 61 CG1236 FBgn0037370 FBtr0078721 1 1 1 80 3R 1562592 1562610 AAGGTGTACGTAACCAGGC 59 1562730 1562748 ATGCCAGGTACTCACTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31548 FBgn0051548 FBtr0078736 1 1 1 60 3R 1462494 1462514 GCAAAGTGGTCCTTATTACGG 59 1462454 1462472 AACTTAATGGCGGTTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31549 FBgn0051549 FBtr0078707 1 1 1 60 3R 1458686 1458704 CTGACATTCACAAGCGTGG 59 1458728 1458746 CAGTGTTCGAGGAACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 2 4 4 176 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206589 TATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG11248 FBgn0037117 FBtr0078430,FBtr0078431 2 2 2 116 3L 21675526 21675608 AAATTAAGTGTCTGGAGCACAC 59 21675685 21675703 GATTAGCCACTTCATGGGC 58 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075043 1 1 4 62 3L 18985822 18991115 ATCATGTCCGACCAGTGTG 59 18985778 18985796 GTTTCCGGTTCCATAGGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 1 2 2 80 3L 18865209 18865281 GCAACATGAATGAGGTGGA 58 18865147 18865165 GCTTACAGCGGAGATTCAC 58 NA Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0302208 2 1 2 206 3L 17475388 17479297 GTGCAAAGCAAAGTATCATTGG 59 17475122 17475141 ATATACAACATACCCGGCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 3 3 3 133 3L 17468579 17468597 CATCGTCACCTACAAGCTG 58 17468694 17468768 GGTATCCCACGATGAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13727 FBgn0036711 FBtr0075243 3 1 1 86 3L 17334033 17334053 GGTGGGAATATACACGATCGA 59 17333838 17333856 AGGTTGACTGTCATAGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 2 2 2 80 3L 16621683 16621777 GAGCATCAGTTTGAGATACGAG 59 16621624 16621643 TGGGTAACGAAGACTTTCCC 59 NA Drosophila melanogaster 61 CG13043 FBgn0036600 FBtr0075434 3 1 1 88 3L 16298666 16298684 CATGTTGTCGAGGATGTCG 58 16298596 16298614 TAGGAGGTGTGAACCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5284 FBgn0036566 FBtr0075444,FBtr0302503 2 2 2 80 3L 16084888 16084906 CAATCACCACAATCAGCGG 59 16084949 16085641 GATAGTGCTCCGTCCATAGG 59 NA Drosophila melanogaster 61 CG5931 FBgn0036548 FBtr0075527 3 1 1 80 3L 15959954 15960029 TGCATGCAGAGAATCTAGC 57 15959892 15959911 CATCTATGTCCAGAGGATGC 57 NA Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 3 2 2 95 3L 15541177 15542657 AAGATCGAGGACATGGACG 59 15542716 15542734 GAAGGTGAGGTACTTGGGA 58 NA Drosophila melanogaster 61 CG32087 FBgn0052087 FBtr0076117 3 1 1 60 3L 11725370 11725390 GTGAAATAGATCGCTTGGCTG 59 11725410 11725430 AGAACCAGAGACTTCCATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 2 4 4 80 3L 11520327 11520346 TGATCTCAAAGCCCTAGTGG 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 Sod FBgn0003462 FBtr0076229 2 1 1 244 3L 11105944 11106687 TCTTCGAACAGGAGAGCAG 59 11105718 11105736 GGTGATGTTGACCTTGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG33493 FBgn0053493 FBtr0089606 1 1 1 71 3L 10685987 10686005 ACATGGAACACAATCGGGT 59 10685934 10685957 GTCTTATAGTCATGGTGTAGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 3 2 2 80 3L 9406350 9406369 TTCGAGCTATACGACAACTC 57 9406409 9406503 GATAAAGTTGAATCTGCAGAGG 57 NA Drosophila melanogaster 61 CG34456 FBgn0085485 FBtr0112762 1 1 1 60 3L 9355702 9355721 AAAGCTTCTACCACCGAGAC 59 9355744 9355762 TATACAGCCGTTTCCTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 2 1 1 61 3L 9207866 9207950 TAGAGTTGTTGGTTGGTGTG 58 9207974 9207992 AACCTGCCCAGTAGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 2 3 3 80 3L 8977955 8977975 TCAACTCAGAAATCTCGAGGA 58 8977750 8977915 CTCTTTGGAAGCTCGATTCTG 59 NA Drosophila melanogaster 61 CG13312 FBgn0035931 FBtr0076587 1 1 1 62 3L 8799876 8799894 CAACGACACCCAGATATGC 58 8799490 8799508 TCGCTATACGAACAGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Jon65Aiv FBgn0250815 FBtr0077040 1 1 1 220 3L 6032544 6032639 TACCGATGGAGTTCAGTCC 58 6032823 6032841 AGGTCGAGTAGGAGTTGGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG4623 FBgn0035587 FBtr0077167 1 1 1 126 3L 5136352 5136428 CAAATTTCGCGGTGATCGA 59 5136518 5136536 GTGTATGAAGGAGCCCAGG 59 NA Drosophila melanogaster 61 Ras64B FBgn0003206 FBtr0073212 3 1 1 198 3L 4139252 4139917 TCATCCAGAGCTACTTCGT 57 4140135 4140153 CTGGAATGATCGTTGAGCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11593 FBgn0035488 FBtr0114509 1 1 1 80 3L 4038858 4038878 GTGCTAATCTATCTGCATGGC 59 4038737 4038816 AAGCAGCTGATAACACCGT 59 NA Drosophila melanogaster 61 CG12182 FBgn0028504 FBtr0072955 1 1 1 80 3L 2599062 2599280 CAAGATGTCGGGAAATATTATCTGG 59 2599006 2599026 TACAAAGTCGTGTACCGAGTC 59 NA Drosophila melanogaster 61 msd5 FBgn0035210 FBtr0072724 3 1 1 60 3L 1333078 1333098 GATTTCAGCAGCATTTCATCC 58 1333038 1333058 TTAGGTTTCTCACATGTTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32318 FBgn0052318 FBtr0072732 1 1 1 92 3L 1246607 1246625 ATCTGGTGGGAATACGTCG 59 1246467 1246485 CGTTCCCGAGAATTAAGGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 1 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 2 2 2 80 3L 205417 205436 GTGAATACGGTCAACGAGTG 59 203608 205378 CGTGATTATTTCCTCAACCTTCC 59 NA Drosophila melanogaster 61 5SrRNA:CR33380 FBgn0053380 FBtr0086372 1 1 1 60 2R 15643740 15643758 ATACATCGGTTCTCGTCCG 59 15643698 15643716 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 1 1 1 86 2R 20556619 20556694 CCGAATTTCCAGCTCTTACAC 59 20556553 20556571 AAAGAGGAGCTTCCGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3548 FBgn0035033 FBtr0072315 1 1 1 153 2R 20487771 20487789 CTCCCTTAACTGGGAGGAG 58 20487905 20487999 GTTAAGGGCATTGAACTGCT 58 NA Drosophila melanogaster 61 gek FBgn0023081 FBtr0072287 1 1 1 80 2R 19984980 19984999 GTTCTCTATGACGAGTGCAG 58 19984856 19984940 GAAGGGTTTGGATAGTTTGAGG 59 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072143,FBtr0072142,FBtr0301411 1 4 4 81 2R 19833971 19833990 TGACGCAATAATGGAATCCA 57 19834032 19834132 AGATATACGCAGAAACTCGTC 57 NA Drosophila melanogaster 61 CG30411 FBgn0050411 FBtr0072016 2 1 1 207 2R 19303629 19303647 GATGTTCGGGATGTTTCCG 59 19303818 19303899 GTTATCGCTGGCTTTCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG34424 FBgn0085453 FBtr0112725 1 1 1 84 2R 19247386 19247406 TGACCAAGTGGAACATAAAGC 58 19247516 19247534 ATGAAGAGATCGATGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG30192 FBgn0050192 FBtr0071967 3 1 1 96 2R 19026213 19026234 ATCAATGACATCGATGAGACTG 58 19026289 19026375 TCATCTGATCTAAATGCTCGC 58 NA Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 1 1 1 69 2R 18928884 18929132 GAATGGACTTGGATCCGAC 58 18926510 18926528 AACTGGTTCAACCTGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG30274 FBgn0050274 FBtr0071888 2 1 1 93 2R 18712764 18713014 GAAATATTCGTTCCCGACGA 58 18713070 18713088 TAATGACGCTAAAGCAGCG 58 NA Drosophila melanogaster 61 RYBP FBgn0034763 FBtr0071868 1 1 1 121 2R 18558718 18558736 CCTTCAAGTGTCGCATGTG 59 18559205 18559223 GTTGGGCATGTTGACACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 1 1 1 60 2R 18547465 18547542 GACCTTGTATATCTGCTGCT 57 18547563 18547583 GCAGTAGTTGATGAAGTAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 T3dh FBgn0017482 FBtr0071848 1 1 1 100 2R 18219131 18219364 TACGCCTTCGAGATGTCAG 59 18219049 18219067 AAACAAACCTTCCGAGCTC 58 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 1 2 2 80 2R 17542998 17543106 TCTACTCTTGCTCACTGCTC 59 17543149 17543167 CATCCTGACTCATCGAGGG 59 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 3 2 2 88 2R 17424022 17424098 CGTAAATCATCGATTCATCCTG 57 17423897 17423915 TTAAGCTGTTGAACTCGCC 58 NA Drosophila melanogaster 61 CG9346 FBgn0034572 FBtr0071526 3 1 1 80 2R 16900823 16900843 GGACAAAGAGAATATGGAGCG 58 16900944 16901032 ACATTAAGAACAGCCTTCTCTG 58 NA Drosophila melanogaster 61 Ir56c FBgn0034457 FBtr0086466 3 1 1 60 2R 15398085 15398104 GGTTCAGTGGTGTCTAATGG 58 15398124 15398145 AAGTGGGTAGAAATAGGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 2 3 3 81 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010726 15010809 TTGGCCACTAATTCAAAGTACG 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 3 4 4 81 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529502 14529522 CATCATGGTATTTAGCTCGCC 59 NA Drosophila melanogaster 61 Eip55E FBgn0000566 FBtr0086710 2 1 1 60 2R 14515966 14515985 TAAAGGTAGCCGACATCGAG 59 14516008 14516026 ACGATATCCTCGCGTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 swi2 FBgn0034262 FBtr0086889 3 1 1 80 2R 13580288 13582526 ATCTTAATAAGGCTGAGCCG 57 13580227 13580246 GGTGGTTATGGTAGTGATGG 57 NA Drosophila melanogaster 61 CG18469 FBgn0034206 FBtr0086996 1 1 1 60 2R 13133440 13133463 GTCTACAGATACAGATGTGAATCG 59 13133403 13133426 GACTAACCGATCATTATCAGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8311 FBgn0034141 FBtr0087121 3 1 1 93 2R 12475169 12475188 ATCGGGAATTCTAGCTGTCG 59 12475003 12475113 GGATCGGGAAGATCTTCCC 59 NA Drosophila melanogaster 61 cato FBgn0024249 FBtr0087183 2 1 1 60 2R 12165716 12165734 CCGGAATGGCAATTCTTGG 59 12165674 12165693 CCATGATGGGTCCTAGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0087274,FBtr0302796,FBtr0302789,FBtr0302790,FBtr0302791 1 6 13 91 2R 11841336 11841418 GTCCATCCACAGCAATTGG 59 11841263 11841284 CACGTCGTTGTGATAGAATCTC 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 2 5 5 80 2R 11211582 11211605 GATAATTAACGATAGGGAGATGCG 59 11211644 11211716 GGTTTCATTGCATCAGGCA 59 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257,FBtr0089258 2 2 2 81 2R 10389331 10389410 AACTAGAGGTGTATGGTTCTGG 59 10389271 10389289 ATTAGACTGTCGCACACCT 58 NA Drosophila melanogaster 61 CG13330 FBgn0033848 FBtr0087671 3 1 1 200 2R 9402848 9402932 GTATATCGAATCCTTCGCGT 57 9403095 9403113 GGCTGAATCTGGGATTGTG 58 NA Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 3 2 2 65 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108845 9108864 GCGGATACTGTGGGATAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 bic FBgn0000181 FBtr0087782 1 1 2 220 2R 8757769 8757787 CATTTGACTACGACTGGGC 58 8758042 8758061 GAATTGTGTTTACCGACAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp9h1 FBgn0033775 FBtr0087820 1 1 1 82 2R 8729361 8729379 AGCCATGTCCAGGATTAGC 59 8729168 8729315 TGCGGAGAACCTTCATCAG 59 NA Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 2 1 1 60 2R 8293621 8293699 CATTATGAGCTCAAAGATGGC 57 8293719 8293739 CATTCACGGACTTCAAGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 zetaTry FBgn0011556 FBtr0088164 3 1 1 60 2R 7227050 7227068 CTACTCCTCGAACCAACTG 57 7227008 7227026 ATCACAAAGCTCGTTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224,FBtr0088225 1 2 2 63 2R 6707681 6707699 ATCTGGCCAATCCCTACAC 59 6707788 6707806 TGATTAAGGTTGTGCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214,FBtr0300578 2 2 2 117 2R 6602946 6603063 AGTTTATTCTGTTGGCTGTCTG 59 6603141 6603159 TAAAGGCAGCTTTGACGGA 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0302497,FBtr0088626 1 3 4 156 2R 5016003 5016021 ACACCTTCCTAAAGCTGCT 59 5015805 5015883 AAGGTGAAGTGACTCTGGC 59 NA Drosophila melanogaster 61 CG34217 FBgn0085246 FBtr0112410 3 1 1 60 2R 4115842 4115862 GAAATCGAGTTGTTCGATCTG 57 4115802 4115823 TATAGTCCTTGAGACGATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883,FBtr0088884 3 2 2 145 2R 3818908 3818926 TCAACTCCATAACGCTGTG 57 3818721 3818801 CACATAGTTCCATTTCACGGT 58 NA Drosophila melanogaster 61 CG30158 FBgn0050158 FBtr0086165 3 1 1 111 2R 2793763 2793781 TATTGTGAAGCGCTTCCTG 58 2793854 2797446 GATGTCCACCTTTAGTGTGAC 58 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 1 3 3 86 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 CG17486 FBgn0032997 FBtr0299924 2 1 1 60 2R 507768 507790 ACGGTATTAGATGAGAGTCTTGG 59 507810 507828 TAGAGTGAGTGCAATGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319,FBtr0080320 3 2 2 101 2L 11962057 11970265 AAAGGGCAGTGAAATTCCTG 58 11961975 11961994 ACTTCAGTAGAGCGGTTCAG 59 NA Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485,FBtr0081486 2 2 2 62 2L 21233482 21233635 GAAACTCTTCGTCTTCGCT 57 21233438 21233456 TTAAGGTGGGAAACATCGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 betaInt-nu FBgn0010395 FBtr0081461 3 1 1 93 2L 21053635 21055002 TTGGTCAAAGGAAACACGC 59 21055055 21055077 TCCAGGTTAGATCCATCAATACG 59 NA Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 2 2 2 182 2L 19496696 19496715 GCGAATAACAAGTCTACCCA 57 19496860 19496969 GCCGAAGTTCTTAAAGTGC 57 NA Drosophila melanogaster 61 CG10639 FBgn0032729 FBtr0081186 2 1 1 92 2L 18973982 18974000 TAGCCTACTCAATGTGGGC 59 18973451 18973926 TCATAATCTCCGCAGCTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31742 FBgn0051742 FBtr0081025 3 1 1 60 2L 17991263 17991284 GAGGAATGTGGCCAATAAAGAC 59 17991303 17991323 ATTTCCCACACCTGAGTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0290267 1 1 3 133 2L 17963536 17963554 TACGGAAGCTATGGAAACG 57 17972308 17972326 GTTTCCTTTCTCGATCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089700 2 1 2 80 2L 15486435 15486453 GTTCCGACATATGTGAGCG 58 15486493 15490710 CTCAACTATTAGCTTCGACTTCG 59 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 3 3 3 84 2L 13897287 13897305 GCAAGAGATGTGCGAACTC 59 13897353 13897435 TTGCGCCATTCCATATGAG 58 NA Drosophila melanogaster 61 CG6405 FBgn0032428 FBtr0080366 3 1 1 87 2L 12425211 12425229 GGACTGAAGAGCTTCACCA 59 12425278 12425352 CGTTGACAATCTTGTGTTCCA 59 NA Drosophila melanogaster 61 CG33303 FBgn0053303 FBtr0080052 2 1 1 74 2L 10375166 10375184 AACAAGATCACCCTGGGAC 59 10375054 10375076 GTTCTCATAGTGGATGACTAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5366 FBgn0027568 FBtr0080054 3 1 1 81 2L 10358764 10358783 TACGACATCAAGATGCTGAC 57 10358640 10358721 GATCGAGTCTTAGCAGAACC 57 NA Drosophila melanogaster 61 CG9483 FBgn0032072 FBtr0079738 3 1 1 60 2L 8866964 8866982 GACTTAGTGTGATCCTGGC 57 8867003 8867024 TGGGTGTAACCTATAATGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Chrac-14 FBgn0043002 FBtr0100267 3 1 2 60 2L 8440931 8441043 GGAGATTATCAAAGATGCTGC 57 8441065 8441083 CTGCAGTTCTTCTGAGGTC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12560 FBgn0031974 FBtr0300761 2 1 1 85 2L 8009185 8009263 TTCTAACGCTACGTTCGGA 58 8009118 8009136 TAACGCTTTCGTCACTCGA 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112720 1 1 5 127 2L 7975221 7975239 CTCAAGGAGATGCACAAGG 58 7958637 7958657 GGCATAGATGAATGACTCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 psd FBgn0086265 FBtr0079238 3 1 1 60 2L 5963601 5963619 CTCCTGCCTATGAAGCTCC 59 5963559 5963579 TAATCAGTTGTAGGTGCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7251 FBgn0031723 FBtr0079117 2 1 1 80 2L 5587906 5587981 AGGGAATTAAGGTGGACCG 59 5587844 5587864 GCTTCTCTAGTAATTGCTGCT 58 NA Drosophila melanogaster 61 CG14017 FBgn0031721 FBtr0079105 3 1 2 71 2L 5554256 5554274 TATGGCACTTCTAGAGCGC 59 5554353 5554374 ACGATGGTCTATGAGTAAATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 3 2 2 81 2L 3865418 3865501 TCCGCATCATCAAGAACAC 58 3865545 3865564 GATCGAATGGTCCTAAACCC 58 NA Drosophila melanogaster 61 CG3528 FBgn0031430 FBtr0077781 1 1 1 111 2L 2517591 2517662 AAGCAAATTTCGACCGTCG 59 2517498 2517517 TAGAGTTCTCGAATCGCGAC 59 NA Drosophila melanogaster 61 CG5118 FBgn0031317 FBtr0077979 1 1 1 81 2L 1171760 1171779 CCGCATTATACGCATCATGG 59 1171628 1171716 TTCCTCGTGAATGGGTAGC 59 NA Drosophila melanogaster 61 Plap FBgn0024314 FBtr0077980 2 1 1 152 2L 1169750 1169768 CAACTACAAGCTGAGCTGC 59 1169550 1169634 AAGTACTCGTTCCCATGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4291 FBgn0031287 FBtr0078034 3 1 1 177 2L 851867 851885 CAATGTCGACGAGGAAGTG 58 851650 851726 CTCAGGTGCTTTCACTTCC 58 NA Drosophila melanogaster 61 lectin-21Cb FBgn0040106 FBtr0078046 3 1 1 96 2L 621128 621482 GTTTGATCGATTATCCGCAGG 59 621052 621070 TCGACCAGGCTGAATTCTC 59 NA Drosophila melanogaster 61 Ptth FBgn0013323 FBtr0301522 2 1 1 80 2L 576130 576152 GATTTCTATGAGGATCTGGTGAC 58 576014 576092 GAGCTCATTCGTAACTTTGCA 59 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078135 1 1 3 83 2L 284957 286314 TTTGTGCGATAATTCAGGCA 58 284893 284911 GTTTCTTGGGTGTCAGCTC 58 NA Drosophila melanogaster 61 Ir21a FBgn0031209 FBtr0113008 3 1 1 97 2L 23063 23082 CATAGCATTCGTAACGTTGC 58 22927 23003 CACCATTGTTCAGGGTTCC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 1 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111915 AATCGAAACCCTTGGAGGA 58 NA Drosophila melanogaster 61 Gsc FBgn0010323 FBtr0114568 1 1 2 120 2L 594375 594793 GAGCAGATACTTCTTCAAGATTCTC 59 594279 594297 CTTGAACTTGGCCTTCGAG 58 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 2 3 3 60 2L 823530 823553 GATATGAAGGTCTACATGATGGAG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 2 3 3 85 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831773 831791 GTACATGTTCTGCTCCACG 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 2 6 6 127 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499926 1499944 CTGATTCGCATCCACTTGG 59 NA Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 3 2 2 80 2L 1747789 1747810 GAAACTACGTGTATCTGTACGG 58 1747851 1748782 CCAGCGGAAATGTCAAGAC 59 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0110883 3 1 5 96 2L 1938538 1938556 AGCATATCGGACCTCAGTC 58 1938616 1938879 TGTCATGGGAGTCAACTGG 59 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068 1 1 3 126 2L 2010196 2010215 CTATTGATTTGGTCCTCGCA 58 2010304 2026776 AGGAGATTCCTTTATCGCG 57 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 1 4 4 87 2L 2224614 2224633 AATCTACCATCCAGACGGAG 58 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 1 4 4 98 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492328 2492346 ACGCGATCGTAGATAAGGA 58 NA Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 2 1 1 230 2L 2768069 2768088 CAGTTCGGACTGCATTAGTG 59 2767739 2767760 GCTGTTGTGGTAAATAATTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0273293,FBtr0077621,FBtr0077623 3 3 3 116 2L 2856099 2856119 TCCAGCTGTCATTTCTTTCTC 58 2856268 2856286 GATCAACATTCTCACCGGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 2 1 1 98 2L 3509820 3509843 GTTCTATTATATCCGAGGAGTGGA 59 3509678 3509696 CAAATTCGCTGGTTCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 3 1 1 103 2L 3670474 3670494 TCATTTCTTGCACTAGCTCAC 58 3670326 3670344 GGTGCAAACGTGTATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0290255 3 2 3 95 2L 3869054 3869131 AGTTTGGATGGCTTTGATTACC 59 3869184 3869205 AAGACTCTCAATAGGATCGACC 59 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077432 2 1 2 84 2L 4395105 4395126 TGGATAACCTTACTGTTTGCCT 59 4395171 4395246 TTGGTGACCAGCAGATAGC 59 NA Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 1 1 1 86 2L 4968460 4968478 TTGTCCCGATGAGCTAGAG 58 4968329 4968347 ATAAAGATGGGCTGCACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 1 1 1 68 2L 4977642 4977666 GAAGTGCTATGATAACTACTTCCTC 59 4977754 4977772 CTCAGCAAAGCCTTGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079043 1 1 11 167 2L 4994985 4995386 GAACAGATTGTTGGAATCCCT 58 4994838 4994856 TAGATTCTGAAGGCGACGG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 110 2L 4994864 4994882 CTTGTCGCTCCTAACCCTC 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 110 2L 4994864 4994882 CTTGTCGCTCCTAACCCTC 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079074,FBtr0079075,FBtr0300012 2 3 3 80 2L 5356385 5356634 GGACAATCAAGATCGCACTC 59 5356676 5356695 AACTTGTCGGCCAGTATCTC 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0290119 3 2 3 89 2L 6975793 6975811 AGGTACGCAGAACAATCGT 59 6975124 6975740 ACGGGATCATTGACCACTG 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 1 4 4 80 2L 7444382 7444469 CATTATCGATATGGAAGGGCTG 58 7444509 7444528 ATGTAATCCAGCAACATGGC 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 3 4 4 81 2L 7727745 7727837 CTGTGTCTGTTTCAACTAACCT 58 7727685 7727703 GAATCAAGCCCTGACTCAC 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 2 2 9 103 2L 8227139 8227677 CTTTATTGCAACCGGATTGG 57 8227055 8227073 TAACAGTGAGGACCTCGTC 58 NA Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 1 1 1 60 2L 8519769 8519787 GAGGCACAGGATTTCTAGG 57 8519886 8519905 CTTACATCCGTTGAACGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 3 3 3 118 2L 8674261 8674279 CCTCTAGGCTTCCTACCCA 59 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 3 3 9 197 2L 9906105 9906123 GAATGATACGCGGAAGGTG 58 9905074 9905883 TAGTTTAGCTTGGGAGGCC 59 NA Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 1 2 2 251 2L 9967697 9967715 GAAGACCTGGTTCAACCAG 58 9967991 9968009 GATTTGTTCTTGCGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 1 1 1 219 2L 10201399 10201418 CCGAGAAGTACCAGAATGAG 57 10201669 10201688 TTGTTCAGCTTGATGAACAC 57 NA DesignNoJunction Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 3 4 4 127 2L 10248911 10249109 CCAAGGAATAGTATGCGCC 58 10248802 10248822 GCTTCATTAGCTTGAATTCCC 57 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 3 3 4 134 2L 10248626 10248644 ATGGACGCTAATCTCTGCC 59 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089737 1 2 4 80 2L 10264878 10264958 TGGAGCGCTTAATTCAATGG 59 10264999 10265019 CGAGTTCCTGAAGTAACTGGT 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 3 2 3 183 2L 10322826 10323682 AATGATAAGGATCCCTACCGG 58 10323895 10323913 GATCATCGGTTTGCAGGTG 59 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 1 2 2 81 2L 10339551 10339572 GAGAAACTCCTTGAGATTTGGT 58 10339613 10340165 TTTCCCAATCAGATCTGCTG 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 1 5 6 80 2L 10399673 10399772 ACAGGTATTGTAAATGTCGCG 59 10399813 10399832 ACTTGAACCATTTGTACCCG 58 NA Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 2 3 3 80 2L 10512981 10513000 GCTGGTCTACATCTACACCT 58 10512855 10512940 GCGATAAACAGATAACGGGAG 59 NA Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0080136,FBtr0290229 3 2 2 63 2L 10771182 10771200 CAACCAGCGCATCAATCTC 59 10771226 10771245 GTTGTTTATCACCTCGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672 3 1 2 92 2L 10919386 10923155 ATGTCATAGTCGAGCCTCAG 59 10919313 10919331 TTGACCGGAATACCTTGGA 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169 2 1 4 85 2L 10968570 10968699 AGCTATAAACGACAATTGGACC 58 10968506 10968524 GATTCGCCACATCTTGCAG 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 3 5 5 80 2L 10992855 10992876 CTTGGTTACATCAGTGAATCCC 59 10992916 10993007 GCGCTGTACTTTACTGAAGC 59 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 1 1 2 90 2L 11790073 11790091 TTCCTCATATTGTGGGCGA 58 11790202 11790378 AAATCCATAACAGAAGACTCGC 58 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 3 1 2 82 2L 11790186 11790204 AGTGACGAGATTACCTGCG 59 11790302 11790384 CCATCCAAATCCATATCATCTTCG 59 NA Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476 2 1 2 75 2L 13310254 13310802 TGTTCAACGTTCAGACGTC 58 13310197 13310215 TCCGTATCCTTTGTGTCCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 2 2 2 85 2L 13387100 13387187 CTATTTAGACGGATTGGAAAGTCTG 59 13387039 13387057 CTGTTTGTGCTCGATCGTC 59 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 1 1 2 93 2L 13783029 13783052 GGGAGGTAAACTTTAGGTATATCG 58 13782908 13782927 TAGTTCAGCTGATCCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996 2 1 3 86 2L 13785904 13785925 CTCTACAACTATTTGGGTTGTG 57 13785969 13786224 ATAACCGATACGGAAATCTAGG 57 NA Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 1 1 1 74 2L 14040737 14040757 AAAGAAGAGACGGACAAAGAG 58 14040405 14040423 GTGCGTGTGGTTAAGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 1 5 5 80 2L 14195780 14195801 TAATGTCATACACATGCTCGAC 58 14189222 14195741 TACAGGTTCAAGCTCATTAGC 58 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 2 5 5 80 2L 14195780 14195800 AATGTCATACACATGCTCGAC 58 14189221 14195741 GTACAGGTTCAAGCTCATTAGC 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 3 5 5 80 2L 14321173 14321191 ATAGGAAGAGCAGCTCCCT 59 14321234 14321317 TCGACAGTTCTGACAGACTC 59 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 2 2 3 90 2L 14392291 14392309 CTATGTGAAGGCTCTGCAC 58 14391989 14392237 ATTTAACCCAACGGGTGGA 59 NA Drosophila melanogaster 61 CG42586 FBgn0260954 FBtr0301740,FBtr0301741 1 2 2 79 2L 14741706 14741791 TGATCCTCTTCATTGCCCT 58 14741645 14741663 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 2 2 2 90 2L 15230348 15236616 GGTGAATGTCATCATGGGC 59 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 3 2 3 113 2L 15679211 15679230 AACATTGGAGCTGCTTTGTG 59 15673029 15679135 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 1 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 3 3 4 87 2L 16692117 16696596 TCGAATAGAACCAGACGTGG 59 16696644 16696664 CTGATGCAGGTAATTGAGTCC 58 NA Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 3 2 2 80 2L 17158736 17161864 GGAGTCAACATCGATCTGC 58 17161907 17161926 ATAAAGTCCGGAACTCTGGA 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080977 3 1 10 142 2L 17394473 17398601 GATCAATTCGGCTTATACAGATCTC 59 17398701 17398856 CATAAGATGCGCGACTTCC 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 1 4 5 93 2L 17437485 17437503 CTTCACCATGCACAACCTG 59 17437315 17437431 CTGATTGTGCAGATGATTTGTG 58 NA Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 2 2 2 100 2L 17479236 17479256 TGTATTGAGTATGCACAGGGA 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0081031 1 1 2 81 2L 18083180 18083262 AGAACTTAGGTTGGCACTG 57 18083307 18083325 TATAAGAATGCAGCCCAGG 57 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0081031 2 1 2 82 2L 18083180 18083262 AGAACTTAGGTTGGCACTG 57 18083307 18083326 CTATAAGAATGCAGCCCAGG 58 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 3 2 2 104 2L 18862251 18862269 TATTAGGGACAAGCGACCC 58 18862104 18862184 GCATTGTAGCAGGTTCTGAG 59 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 1 3 3 86 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 3 4 4 81 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391896 19391914 GCTTGTCAGCTCTTCAGTG 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 3 6 9 96 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882380 20882400 CTGAGTATGTTCTTCACGTCG 58 NA Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0081500,FBtr0301238 2 2 2 80 2L 21158236 21158317 CTGAATGAGATTAGGGTTCCCT 59 21158177 21158197 GGTGGTATTTACGTAACCTGG 58 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 2 3 4 83 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257177 TGTAAGCTTGCAAGCTCTG 58 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 3 13 13 81 2L 21289505 21289525 TTTATACAGCCCAGTCTTGGT 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512 3 1 3 121 2L 21312193 21318132 GACCTGAAAGATGAAGAATGTC 57 21318214 21318232 TTGTTTGCGGGTACTATGG 57 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 1 5 5 80 2L 21617537 21617559 GATAGTAATAGTCGCGAATGCAG 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 3 5 5 81 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085914,FBtr0085915 1 3 5 85 2L 21671384 21672300 AGTCGCAAGAACATGTCCA 59 21671317 21671335 TCGTTGAAGCTTCCCTCTG 59 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085957 3 1 3 104 2L 22325838 22363440 TTTCTATAGATGCTGGCCGT 59 22363506 22363525 GGCGATAATGTCGATAGCTG 58 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111125 1 1 3 173 2L 22817649 22817723 ATCAGTTGTGACTCTTGGG 57 22817912 22817930 TATACAAACACGTCCTCGG 57 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 1 3 4 95 2R 1414860 1414878 ACATCCTAATGGCTACGCA 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 1 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662530 TTATATCTTGGGCTGGATACGA 58 NA Drosophila melanogaster 61 PNGase FBgn0033050 FBtr0085971,FBtr0085972 1 2 2 105 2R 1907043 1907121 GATATGCCAAAGAAGGAGAACAC 59 1907186 1907204 CAATCGCGTTCCACTTTCC 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 2 4 5 82 2R 2503183 2503201 GGAGCTGGAAGCTATCTCC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 3 2 59 81 2R 3225660 3235367 AGTGCAAGTCATGGTTCCA 59 3225597 3225615 GACCGAAACAGAGTCCTCC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111061 3 1 59 85 2R 3244088 3244108 GGTGTGAATATCAGACAAGCA 58 3236472 3244042 TTGTACCATCTAAACGCTGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111089,FBtr0111077 3 3 59 91 2R 3219879 3223232 TGAACGTCTACGTACCTCC 58 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 CG2121 FBgn0033289 FBtr0088764,FBtr0290124 1 2 2 80 2R 4285170 4285189 AACTCCATCTTCCTCACCTG 59 4284851 4285128 TACTCCATAGCGTTTGAGGG 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 3 2 3 148 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967851 4967872 AGCAGTACATAAATCGAGATCC 57 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088561 1 1 3 135 2R 4967664 4967744 AACTGGATCATGAGTTGGAC 57 4967842 4967860 ATCGAGATCCTCACCAGTC 58 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 1 2 4 140 2R 5119286 5119304 CGTAAACCGGATACCATCG 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892,FBtr0088508 2 2 2 81 2R 5320556 5320643 TCATCTATCTAAAGGCTCTGTCC 59 5320684 5320702 GCGCGATAGAACTTTGAGC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299846,FBtr0300527 1 2 5 107 2R 5362614 5362632 ATGACAGCTATGCTCTGGG 59 5362703 5362825 TAGATACCTCGCAAAGGGC 59 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245 3 1 5 121 2R 5395647 5395665 GTAACTAGCTCTGGTGTGC 58 5395750 5397402 CTGCCCATTGCTAAAGGAC 58 NA Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 2 2 2 97 2R 5474092 5474164 GATATCGCTGCACAACTCC 58 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467,FBtr0302051 2 2 2 157 2R 5594446 5594539 CTTTAAAGATCACATACGACCC 57 5594654 5594675 TCTCAGTGTTTATATGGACCTC 57 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088397,FBtr0088396 3 2 2 66 2R 5937120 5937138 TTTAGCGGACATGGTGGAG 59 5937276 5937294 TGATGCGGTACTTGTTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 magu FBgn0033478 FBtr0113062 3 1 5 88 2R 5948855 5949608 AGGAGTTTCACAACCTGCT 59 5949660 5949678 GACCGACTGATCCATCCAG 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 3 4 5 98 2R 5948860 5949131 TTTCACAACCGTAGTGCTG 58 5949193 5949211 ATTGACGTTGGTGTTGTGG 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088422,FBtr0088420 3 2 3 81 2R 6000611 6000630 ATCTCCAGTACAGCCTACTC 58 6000673 6001064 CCACAAGAGCTAAATAGCCG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214 3 1 2 111 2R 6604805 6604823 AAATGGAGGATCCCGACAC 59 6604897 6607314 AATATTCCGCTCGGTATCCG 59 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 1 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 2 5 5 80 2R 7202397 7202415 GATCCCGATATCCCACTGG 59 7202222 7202358 GATACCGATCATAATCATCAGGGA 59 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 1 4 4 80 2R 7531188 7531206 GAGTGCAGCCAGATTACAG 58 7531066 7531146 GTGCGATAGGGTCAATTTCTC 59 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 3 2 4 130 2R 7532454 7532917 TCCCAAACATTCCTAGGCG 59 7532259 7532362 TATTTGCATACCTGTGCACAG 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 2 6 6 154 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547877 8547966 GCTTGTTCTCACTGCTCAC 59 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 3 4 4 98 2R 10059939 10059957 TCTACTGGGTCACGTTTGG 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795,FBtr0112796 2 2 8 81 2R 10064972 10065397 CGGGACACCAATTCAAGTG 59 10065442 10065460 CTTTAGGTTGGGTGCTTCG 58 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 2 4 4 84 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125980 10125998 TGTTGCTAAACCCGAAGTC 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 2 4 6 80 2R 11172468 11178448 ACCAATTGGGTGTTTCACC 58 11172406 11172427 GCATGGTATGAATTTGATGCAC 59 NA Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 2 1 1 114 2R 11182519 11182537 GTTCCTGTTCTGGTTCACC 58 11180980 11180998 CTGGACATGGTTCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087337 2 1 5 82 2R 11444246 11444265 GATCGACGAGTGGAATATGC 58 11444309 11449328 CATTACGATCTTCCATGGCC 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 2 5 7 94 2R 11551927 11552825 GGAATTTGCTCCATAGACGAC 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 2 3 3 60 2R 11589069 11589143 CTCAAGCCTGTGGTACTCC 59 11589027 11589047 TAATCAAAGAGTGTACGGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0302163,FBtr0301313,FBtr0100388,FBtr0087315 3 4 7 164 2R 11669314 11669334 ATCTATTGCGGAAACACTCTC 58 11667770 11668495 CTATTGCCGAATGCTGGAG 58 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 2 3 3 80 2R 11812361 11812438 CAGGATCGTTTGAGAATCCC 58 11812300 11812323 GATAGGAAAGCAGATAAGGATTGG 59 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 3 3 3 80 2R 11812930 11813011 GTTAATGATCGGCAGCTGG 59 11812868 11812888 GGACTTGAGACCCTTACAGAG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302795,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 1 5 13 88 2R 11848682 11848827 CCAATTCGAGACACATATTCTC 57 11848615 11848633 ATCCATTGGATTTCGGGAC 57 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 2 4 13 80 2R 11846816 11847306 TCGTACTTCAGAGATCCACC 58 11846755 11846773 CGACAACGAGATGTGAGTG 58 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114473 3 1 3 127 2R 12084069 12085999 AACCAGAAGATTTCCGGCA 59 12086090 12086108 ATATAATTGGCCGGCTCCC 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 3 3 4 81 2R 12415123 12415141 ATGTGATCAACTTGGAGCC 57 12415185 12416063 TTCTTGCAGTCGAAGATCTG 58 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 3 2 5 89 2R 12442680 12442698 ATATTGAGAAACGCTGGCG 58 12442745 12443120 CATTAGAGGTAGTTGTTTCTGAAGG 59 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 3 3 3 80 2R 12454486 12455297 GAATTGGAGAAGATCCAGCT 57 12455339 12455358 CAGTAGAATCTTCCCGAACC 57 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 3 3 3 82 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541076 12541164 CTAAGCCCGAATAGAACTTATCG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 1 7 9 80 2R 12959281 12959299 GGTGAGATGACAACACCCA 59 12958998 12959240 TTGAGCTTGAGTGTTATCACTG 58 NA Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 3 1 1 66 2R 13455638 13455656 ACTGGAAAGATCCTCACGC 59 13455203 13455221 CAACTCGAGCCATTGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086688,FBtr0086684,FBtr0086687,FBtr0086689,FBtr0086686 2 5 8 192 2R 14309050 14311642 TGGAGGACCATAATACAGCC 59 14311871 14311889 GTCTTGGAGGCTAGGACAG 59 NA Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 3 3 3 80 2R 14588756 14588832 GAGCTGCAAAGCTATATGCA 58 14588874 14588893 ATGTGCTACGGATAGATCCT 57 NA Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504 2 1 2 84 2R 15105663 15105681 AGCGATCTTCTAGTCCCGA 59 15108277 15110753 AAGGTCGCTCTTAGCTTCAG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362 2 7 10 80 2R 15296095 15297142 CCCAAGAAGATTACAAAGTGGG 59 15296036 15296058 AAACTGGAGTGGATCTTCTATCC 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086495 2 1 6 81 2R 15434004 15434022 GCAACCCTAACATCTACCG 58 15425704 15433959 AATAGCGGTGGTTCATTGG 58 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318 3 1 3 117 2R 16144284 16144303 CCTGTTATCAATGTCGAGCA 58 16144126 16144206 AGAGTGATGATTTGTTGGACC 58 NA Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 2 2 2 80 2R 16153222 16153294 TTGCCCAAATGATTGTGATGG 59 16153334 16153354 AGTATATCCATGCCCTCACAC 59 NA Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 3 2 2 179 2R 16232031 16232161 TCTTCCTTTCAAATGCCCG 58 16232304 16232322 GAAACAGGTGCGGATTAGG 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775,FBtr0112776 2 3 4 81 2R 16358011 16358034 GATGAGGATGAGTTCCTAAATCTG 58 16358074 16359054 ACGAGAGGTCTTCTTGCTG 59 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495 3 1 2 60 2R 16439298 16439316 CAAGTAGTCCGAGGTTCCA 58 16439197 16439215 GGGTGAAGTTCTTCAGGGT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071525 1 1 3 103 2R 16888631 16888651 GTCAGGAATCTGTTCAGTCAC 58 16888716 16890628 GATGTGCTGCTACTGTTCG 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 3 3 3 87 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608828 17609376 ATAGGCGATGATACCTCGG 58 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 2 2 2 159 2R 17969992 17970010 GATCTTCCGACAGATGTGG 57 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 2 6 11 88 2R 17996479 17997104 ACAGTCGAGCAATCAGGAC 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 2 1 1 60 2R 18010952 18010973 GATACCAGAGGATAGAAGAGCC 59 18011055 18011073 TAATTCCGCTGGTCTTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 2 2 2 165 2R 18013848 18013868 TCTCAGAGGTACTGAACTCAC 58 18013648 18013721 TTTAAGGCTTTCTGCTCGC 58 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242 1 1 4 137 2R 18294312 18294559 GCTTAATCGTGTGCTGACC 59 18294660 18294678 TCGTAGTCGTAGTCCTTGC 58 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273318 2 4 5 164 2R 18595822 18595841 CCACTTTGTGGAAACCTTCG 59 18595968 18596202 TCGTTATCTTCGGCCAGTG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 3 8 13 141 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814812 18814832 CGTGAATGTTTCTATGCAGGT 59 NA Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 1 2 2 113 2R 19574387 19574560 GAAGCTGTACGATGTTCGC 59 19574637 19574655 AGTAGCTTCGCTTCGAGAG 59 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 1 3 3 80 2R 19616740 19618435 TACTACTTGGCCATAATTGCTG 58 19618474 19618494 CTGGTTGATGAACTCCTTCTC 58 NA Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135 2 1 2 145 2R 19791708 19791726 TTCTGCATGGATGGATCCA 58 19791898 19791968 AAAGTTTGTGTACAGCCGC 59 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 3 2 4 85 2R 19833784 19833989 AGTGACGCAATAATGGAATCC 58 19834032 19834134 GTAGATATACGCAGAAACTCGTC 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 1 3 6 121 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299700 1 1 3 83 2R 20304112 20304209 GCCCAAGTTACGTAGTACCA 59 20304048 20304066 GAATTTACGCTGAGCACGG 59 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 3 4 4 81 2R 20552130 20552148 GCTAAATCTATCGTCGGCG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 1 5 5 80 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770666 AGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 1 2 3 81 3L 201053 201182 GAACCTAAGAGGCCTTCTCC 59 201221 201244 CAGAATTAGGTCCTCAAGAAAGAG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 1 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 2 5 6 82 3L 352341 352362 GTATCTCGAGTTATCCGAAAGG 58 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0072571 1 1 4 132 3L 344209 344227 AATCCAACCAAACTTGGGC 59 343641 344114 TTAGGATGGTTCCTCTCCTG 58 NA Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 2 2 2 80 3L 371211 371454 ACCCACATATTACAGTCGCT 58 371150 371170 CACCGTCTCGGAAATATACAG 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 2 2 3 60 3L 1254277 1254296 ACTGCAAGTTCAAGATCACC 58 1254319 1254410 CAGTCGTCCACATTCTCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 1 3 3 75 3L 1299144 1299162 CTGTCTACGGCTTCATGGA 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 stet FBgn0020248 FBtr0072712 1 1 2 80 3L 1488127 1488145 AACTCGGACTTCGATGAGG 59 1487927 1488017 GGGATCGAACATGTCAAAGAG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0072745 1 2 3 81 3L 1573692 1573714 CCCAAGGATATTATGACAGATGC 59 1573752 1574002 AGGTTACTTCTGAGCTGTACTG 59 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127 1 1 2 88 3L 2283241 2297487 TGATTGATGTAGCAGGTAGCA 59 2297534 2297555 CTGGCGTTTCATTTAAATTCCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 1 4 4 80 3L 2499739 2499759 AGCCTCATCACAAATAAGTGC 59 2499612 2499697 CACAGCCATAACCTCATCG 58 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 3 5 5 88 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131024 3131119 TCTGGTTGAGAGTCGATATTATGG 60 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 1 5 5 80 3L 3310691 3310776 ATTCCTGTCTGTGAAGATGTC 57 3310818 3310836 AAAGCACCCAAGACTTCTG 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153 2 1 4 146 3L 3832411 3832429 AAGAATCTCGGTGGAAGCT 58 3832539 3832615 TGATTGATGAAAGACGCGC 59 NA Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 2 2 2 88 3L 4154450 4155248 CTTGAATCGGGAAGCTGTC 58 4154380 4154399 TTTCCGACAGATCAAATGGC 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 3 5 5 94 3L 4505302 4505411 AAGTTTGAACAGGTTCGCA 58 4505226 4505245 CGGGTAGAGCTCTTTATGAG 57 NA Drosophila melanogaster 61 lama FBgn0016031 FBtr0077161,FBtr0077160,FBtr0077159 1 3 3 93 3L 5338821 5338839 TTATCCGGATTGGGTGCAG 59 5338686 5338766 GGAAATGGTATTGGACCACTG 59 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 2 2 2 80 3L 6540630 6540648 TAAATGCCTCGGAAAGTCC 57 6540691 6541795 AGATAGTATCGCTGCAACAG 57 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 5 6 105 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583714 ATAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 5 6 107 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555512 6583716 ACATAGATGTCTTCTCCCGT 58 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 2 2 3 97 3L 6741026 6741047 GAACTCCAATGGAAATCTCCAC 59 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 2 2 4 85 3L 7059753 7059772 CATCAATCTCAAGGATCGGG 58 7059820 7059972 CTAATCAGTCAGCCACTCC 57 NA InUTR Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0300824 1 1 2 80 3L 7061710 7061783 TTTAATGGCGTATGACCTCAC 58 7061650 7061673 GAGTATATGCTCAGTGAGTAAGTG 58 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 1 5 5 98 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 3 4 5 229 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 1 4 15 119 3L 7654600 7655092 ATCTCATCGCAGAAACAGG 57 7654499 7654517 CATTGGTTACTACCGTCGG 58 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0076785 1 2 3 198 3L 7761741 7761818 ATCATAATGAGGCCACCGA 58 7760182 7761579 AAATCTTGCGGCAGATAGC 58 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 2 3 3 82 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607900 8607976 TCCACAGTCCATCATTGCA 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 1 3 13 80 3L 8628115 8628133 AATTCAACTCGCCCATTGG 58 8628175 8631270 GCTGATACTGGTTTGGAACTG 59 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 2 3 3 81 3L 8921173 8921192 GCCGTCATGTTCTTCATGAG 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076528 2 3 5 81 3L 9080820 9080842 TCTCTAGTTATGATCGCACTGAC 59 9080880 9080961 GATTGACGGTTGTCATTAGAGG 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 2 5 5 81 3L 9410806 9410824 ACTGCAGCAGATAACACAG 57 9408558 9410762 ATGAATTATCTCGGCCATGC 58 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0301435 2 1 3 120 3L 9660885 9660904 CATATTTGCGTCTTTGGAGG 57 9658782 9660804 TCCGACTGATCTTGTAAACTC 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 1 1 1 153 3L 9962329 9962347 AAGGCCACCCTTTATCTCG 59 9962973 9962991 AACGACACCCACATAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 1 3 3 228 3L 11166960 11166978 AAGTATCTGCTCTTCGCCC 59 11167239 11167655 AAACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 1 4 4 80 3L 11600291 11600309 GGATACAAGCCCGAGATCC 59 11600169 11600250 ATCTTCAAACATGGTCTGTTCG 59 NA Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 1 2 2 81 3L 12366727 12366750 CTCAGTGTTTGCTATATTCTTCCC 59 12366612 12366687 TTGTGGGTCCTTCAGATCG 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290126 2 1 4 81 3L 13879286 13879305 GAGAACGCGATCCTTATAGC 58 13877883 13879182 AAATCATCAGCAGTTACCGG 58 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075788 3 1 2 144 3L 13972299 13972457 AAACCAGGAGTATCCTCCC 58 13972173 13972192 GTATCCATTCGAAGTGCCTG 58 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 2 2 2 85 3L 14583157 14583175 CAAACCAAGTATCTGGCCG 58 14577187 14583109 TGGAACCAGACCTTAACCTG 59 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651 2 1 3 91 3L 14733239 14737298 GCGGTTCAAGAATCTAATGC 57 14737352 14737370 ATAGAGCAACCGCTATGAC 57 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0075695 3 1 2 81 3L 14871663 14871986 GGAGGGTTAACATATGCTATCC 58 14872028 14872046 CGCAGTTCGATCTCATCAC 58 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 3 2 3 93 3L 15104004 15104022 CAACAACATAACCACCGGA 58 15104079 15104197 GTGTGGGACAACTTGAACC 59 NA Drosophila melanogaster 61 CG12316 FBgn0036483 FBtr0075651,FBtr0075652 2 2 2 90 3L 15128051 15128069 ATCATCTGCGAATGAGCAG 58 15127562 15127997 GAACTGAGAACCACTTCGT 57 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0075606 1 1 4 129 3L 15486662 15487040 CGTACAAATGGTTAGATCGCG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA InUTR Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333 2 1 4 131 3L 15486663 15487669 TTGGTACAAATGGTTAGATCGC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 3 2 2 86 3L 15673901 15673979 AATCAAGGAACCTGAAACGC 59 15674027 15674046 TATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0301472 3 2 7 180 3L 16062036 16063230 GCTCCAAGTTCAAGTTGGA 58 16063437 16063455 GAGTTGAGCGACTGATTGG 58 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 3 2 6 157 3L 16108782 16108800 TGCTCAATTCAATGCTGCC 59 16108919 16110653 GGTCATAGACGATGGACTCTG 59 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 3 2 2 80 3L 16621684 16621777 GAGCATCAGTTTGAGATACGA 58 16621624 16621642 TGGGTAACGAAGACTTTCC 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302783,FBtr0302778,FBtr0302782 2 7 12 123 3L 16905420 16906332 CGACTCCAAGGATCTGTCC 59 16906417 16906437 TCCACAGTAGATCTTATCCGC 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175 3 1 10 94 3L 16926458 16928310 AAATGCGCTTTCTTGTTCTC 57 16926161 16926401 GTTAGCTTCTAGTTGGGCC 57 NA InUTR Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 2 3 10 77 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926102 16926401 CTTCTGAATTTCGACGGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 2 5 7 80 3L 16952972 16954606 CAGGAGCTACCAGATTCGAG 59 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291 1 1 2 96 3L 17014737 17014808 GAGTACACTCTCGGCACTG 59 17014659 17014677 ACTTGTCGATCTTGTCCGG 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 3 2 7 111 3L 17527654 17531772 AACAGTGATAACGACTCTGG 57 17531915 17531933 CGATTCTGACATACGGGTC 57 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205 3 1 2 107 3L 17549675 17549694 TTGTGTTCAACGAGAACGTG 59 17549511 17549605 CCTTGCATGCTTTGACCAG 59 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 3 3 3 138 3L 17748902 17749051 TGCCAAATATGTACGATCTGGA 59 17748785 17748807 TTCCTAGAAGGAGCATAGATCAG 59 NA Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277 3 1 2 110 3L 17847797 17849754 GTACTATGGAATGCCCAGCT 59 17847706 17847724 AAGGCGGATAAGACCTTGG 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075150 2 1 4 114 3L 17962598 17962752 GATGCCGATGGATTCTTCC 58 17962502 17962522 GGCAATATTGACAACGATTGC 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075149 2 1 4 81 3L 17991571 17991592 ATCAAGTCCTACCCAGTTATGG 59 17986085 17991532 TGCCATCGAATTCTATGTTGAG 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 1 3 6 80 3L 19685466 19686092 AGGTGTACAGATGTACCAAGTC 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 1 6 6 90 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853562 19853580 CATCCTTCCTCTTGGGCTC 59 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 2 2 6 86 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851538 19851556 AGAGTCCCAAATTCTTGCC 57 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 1 6 6 90 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853562 19853580 CATCCTTCCTCTTGGGCTC 59 NA Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 2 2 2 139 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997628 19997646 CGGCATTGGTCTGATTAGC 59 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 1 2 2 83 3L 20221373 20221391 GTTTCACGATCTCCATGCC 59 20221438 20221528 AGGTACACATCGCTAGGTC 58 NA Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 2 2 2 80 3L 20296381 20296400 GATCATGGTCAACCGAAGAG 58 20296442 20300946 CAATCTGATATGGCGTCTGC 59 NA Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 2 2 2 95 3L 20478512 20478597 ATCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 3 3 3 81 3L 21257016 21257035 ATCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 3 3 3 80 3L 21830924 21830942 GACCATGAAACTGGTGCAC 59 21830809 21830881 CACTTGACGAAATCCTCGTC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 3 3 5 154 3L 21914293 21914311 GATTCGCCAAATATCCGGC 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 2 1 1 72 3L 22641075 22641095 ACTGTTGTCATAAAGCAGAGC 59 22641180 22641200 AAGTCGATCTGTTGTATGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078532 3 1 5 145 3L 22768458 22770215 TCATTGAGGAACAGACGGG 59 22770324 22770342 ACGATACTTGGCCTCTGTC 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 1 5 5 84 3R 452847 452870 CGATTGACTGGTATAAAGATAGCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855,FBtr0300474,FBtr0112871 2 5 5 137 3R 452794 452818 GACGCTATATGGGAATAAGAAATCC 59 452912 452992 CATTGACCAGACCAAGAACG 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0273376 3 1 4 119 3R 536085 536624 CTACTACGTTGGTTGTCGC 58 536707 536725 GTTCCATTGAGGCCATCTC 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 10 10 80 3R 562838 562911 AAATGAAGTAACGAGGTCCGA 59 562778 562796 ATACGCTTGATCAGAGCCT 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089952 3 1 10 109 3R 571645 571663 GGAATCCATCTCGAACCCA 59 570378 571572 ACGGACTCAGTTGGTTCAG 59 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687 3 1 2 84 3R 1356993 1357011 AAGACGCTTCTGTCCATCC 59 1357055 1357147 CCTCTTCGACAGAATCAATATCC 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 CG2182 FBgn0037360 FBtr0078730 2 1 2 92 3R 1484426 1485274 GCTGGCGATAAATTAATGATGC 58 1484355 1484373 AAACTCCTCCAGTTCACGT 58 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 2 2 2 80 3R 1487731 1488796 GGGAATAAGTTTCAGTCCCAC 58 1488838 1488856 CGCATGAAGTCCCATATCC 58 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091,FBtr0302090,FBtr0302092 2 3 3 80 3R 1535944 1536019 GTCTTACTCCTGCATTGCG 59 1536063 1536081 TTTCGTGCGCATATTACGG 59 NA Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 2 1 1 98 3R 1628931 1628949 GTTCATGCAGCAATCACAG 57 1631967 1631985 TAGCGCAGTAGATAGCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0110774 2 1 2 179 3R 2199092 2199192 AAATATCAAAGCCCAACGTCTG 59 2198869 2198887 AATGGTCTTCTGGACGGTG 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081672 3 2 3 81 3R 2308888 2315357 ACTACGATACTGAATTGGACAG 57 2315399 2315417 ATATTAATGGTGCGCAGCC 58 NA Drosophila melanogaster 61 CG1307 FBgn0026566 FBtr0081698,FBtr0301623 3 2 2 171 3R 2483013 2483031 CAGATCATCAATGGGCTGG 58 2482606 2482878 CTCCATAGCCCTTATCCGA 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 1 4 11 85 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734446 2735015 ATGGTTCTGATGGACCTGC 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081743 3 3 4 89 3R 3586918 3586936 ACACGCAAAGTAGTTGGGA 59 3586987 3587739 ATTCCTACAACTTCCTTGTGC 58 NA Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 2 2 2 131 3R 4445732 4446036 TACTCCAAGAATCACGCCTC 59 4446130 4446148 GGTCAGGCAATATGTCAGC 58 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 1 3 3 99 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830303 4830322 CCGGTGAGAGTTTAATTCCC 58 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 2 2 5 102 3R 4858905 4858923 GATCAAGAAGCGCTTTGGA 58 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 pum FBgn0003165 FBtr0081994 3 1 5 80 3R 4982891 4982909 GCAGAAACGCTACATTGGA 58 4924449 4982849 TCGTCACTTACAATATGCTCC 58 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 2 2 2 60 3R 5091840 5091860 TAATAACCTGGAATTCGTGGG 57 5091742 5091762 CTGGATGCGAATGATGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 1 2 2 60 3R 5091840 5091861 TTAATAACCTGGAATTCGTGGG 58 5091743 5091762 TGGATGCGAATGATGTTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 2 5 14 96 3R 5258550 5269739 ATTTCAGTTCCGGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207 3 2 4 81 3R 5348544 5348564 ACTGGCACGAATAATCTTACC 58 5348605 5349269 GTTGTGTCTGATCTTGATTGC 57 NA Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082069 3 1 2 69 3R 5386316 5386335 CAGCAACAGATCGAACTCAG 59 5386676 5386694 CAGTCTGTCGAATGGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 2 1 1 60 3R 5645368 5645388 GTGTACAATGTCATCATGTGC 58 5645264 5645282 TATAGTCTCCGGGTCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 1 5 9 80 3R 5834567 5835034 TCTACGAAGGTTCAAACCG 57 5834505 5834523 GTCGGTGGATATCTCAGTG 57 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 1 5 5 80 3R 6041341 6042794 GGTGGATGAGATATCCGAGC 59 6042836 6042855 TACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 2 1 1 75 3R 6133008 6133026 CAGTCGTAGTGGTGAAGGG 59 6133219 6133238 GTAGCAGAAGATGCAGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 2 2 2 152 3R 6162874 6162954 AGAAAGAGCATCTTGCCAG 57 6163070 6163088 TTACATCCTTCTTCAGCGC 58 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 1 4 4 85 3R 6525744 6525762 CTACGGAGATCGGTATCGA 57 6525808 6525952 CAGATCGTTTATCTTATCGAGC 57 NA Drosophila melanogaster 61 MED7 FBgn0051390 FBtr0082311 1 1 1 71 3R 6586343 6586361 ATCCTGAATCCTGACAGCC 59 6586229 6586247 ATGCATGTTGACGAACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 2 2 4 170 3R 6610563 6610582 GTAGAGATGTCTTCGGGTCG 59 6611949 6611967 ATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 2 4 4 83 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264018 7264036 GTCTAGCTTCATGGAGGCA 59 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530 1 1 2 87 3R 7620447 7620529 CGCAGAATCGAAATCTCATACTC 59 7620382 7620400 TAGCTGATGTGAGCCAGAG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 3 3 15 189 3R 7815238 7818475 ATTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082498 2 1 15 80 3R 7817837 7817855 GAAGAGGTTGCCGAATTCG 59 7815227 7817796 GGTTAAATGTGGCATAAAGCTG 58 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 2 3 3 96 3R 7936151 7936169 ATAGTGACGAGCGAACTGG 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 1 2 2 89 3R 8235153 8236006 CATCCCAAGGATCCCAAGG 59 8236059 8236077 CTTGCGACAATGATGGGAG 59 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0290335,FBtr0301943,FBtr0290334 1 3 4 83 3R 8344791 8344902 CTGGCGCATCTTTAAGGAG 58 8344726 8344744 ATGTGGACGCTGTTAAGGA 59 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 1 2 2 68 3R 8529489 8529507 ATCTTCAATGGGCTGGGAC 59 8529601 8529620 TTTGATGAGTTCCTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 1 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257205 GGATGGATCTTTGACAATGGAC 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 1 5 5 135 3R 9476212 9476541 CAAGGGTGACTTTGAGCAG 58 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 1 2 3 143 3R 10116535 10124524 ATTCGCAGTTTCAAGAGATCG 59 10124629 10124647 TGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 1 3 3 97 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 3 3 3 119 3R 10616867 10616885 TACAGTAGTGCCTCGACTG 58 10616968 10619176 AGTGGCTTGTATCTTGCCA 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083027 3 1 3 135 3R 11014894 11014914 AAATTTACACCGGAGGAACTG 58 11015011 11015101 CATCCAGACTGCTGTTCAG 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 2 2 13 121 3R 11127370 11127391 GAGACGCAAATCAAAGTATTGG 58 11128939 11129375 TTGAGCAGGTCATCTTCGA 58 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 2 3 3 89 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239350 11239368 TTGTTGGTATTGGCGTTCG 59 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240 1 1 2 150 3R 11250969 11259850 CAGATATTGTTGGGAGGCG 58 11250778 11250796 GATCTTCGACAGTGGAAGC 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290014 3 1 5 81 3R 12932049 12932068 CCACTAATAGTTCCGGTACC 57 12931521 12932006 CATTCATGATCACACCATGC 57 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 3 1 7 168 3R 13834719 13835675 CCACTCACTGGACATTTGG 58 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 3 2 2 91 3R 14416141 14416255 CTGAAGAAGACGAATTCCTGTC 59 14416307 14416325 TCATCCTGCCTAAACCTGC 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 3 2 3 80 3R 15230400 15230420 AAAGCGGACTATCCTAAATCG 58 15230459 15230572 TTCGGTTAGCTGAGTTATATCC 57 NA Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123 3 1 2 82 3R 15621988 15622006 TACGAGGACTCAAGTTCCG 58 15621226 15621942 GACAACAGTCCGAAATCGT 58 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 2 3 3 81 3R 15676018 15676036 TGTTTCGCAACCTAAGGGA 59 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 3 2 2 80 3R 16737793 16737877 GGAGCGATTGGAACATATGAC 59 16737733 16737752 TTCAGCAAGCGATACAAGTC 58 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0302412 1 1 2 87 3R 16757051 16757069 AATCTGCGTTGTCATGCAG 59 16756584 16757000 GTCTCAACCAAGTGTAGCG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084073 3 1 22 80 3R 17200833 17200852 ACAGTCCCAGAACTACAGTG 59 17198793 17200791 ATCTCCGTATCTTGAGCCTC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084074 3 1 22 196 3R 17197785 17200795 CACAGAGGCTCAAGAGGAC 59 17197607 17197625 TCTTAAGGCGTCCGTTCTC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 82 3R 17202595 17202614 ATTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 2 22 22 81 3R 17202595 17202613 TTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 2 5 5 60 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18184313 18184331 GTCGAATGTAGTGAAGCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 1 5 5 80 3R 18430301 18430378 GCAGCTTTAAGAAGACTCCC 58 18430419 18430439 GCAAATACAGCACAAGATCAC 58 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 2 2 3 131 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542764 18542941 GTAATGCATTTGGATACTGCCA 59 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 1 2 2 145 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828598 18828616 GAACAGTTTGTCCGACAGC 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 3 2 6 174 3R 19093390 19093550 TACGTGTGAATTTGCTGTCTG 59 19093236 19093256 TGCTCGTAGTTCCTGTTTAGG 59 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425,FBtr0301859 3 3 3 108 3R 19341012 19341030 GCTTTATCCTGTCTTGGCT 57 19340869 19340940 CAACCAGATTCCTCTTGGT 57 NA Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 2 3 3 86 3R 19590399 19590484 CCGAAATGATGTACTGGAACAC 59 19590531 19590549 TTTGCTTGACAGAATCGGC 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 3 2 2 161 3R 19779097 19779182 TGGAATAACGTTGTCCGCT 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 CG5986 FBgn0043455 FBtr0084535 3 1 1 62 3R 19874125 19874143 TTACAGTCGGATTGCGGAG 59 19874222 19874245 CCATTGCTGACTAAGTAGTATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084581 3 1 3 86 3R 19977711 19977826 GCAATGATATGCGCATTCG 58 19977643 19977661 CATTCCGATGCGTGTTAGG 59 NA InUTR Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 1 4 7 113 3R 19985036 19985205 TACCCATTACCCGTATAACGG 59 19984885 19984903 TTCGATACAGCTTGAGCGA 59 NA Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 1 2 2 85 3R 20313249 20313267 TTGATGTGCGCTACTTTCC 58 20313314 20314182 CAAATCGATCTGATCACCGTC 59 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 3 1 2 128 3R 20483308 20483328 TATAGTTCCGCTACCGAAACC 59 20484126 20484234 CTTATCGGCTTTATATTGCCGG 59 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696 2 1 2 161 3R 20618824 20618842 GACGTCACCTATACCACCG 59 20618966 20620055 TTGACATTCACGTTGCAGAG 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 1 2 3 143 3R 20864227 20864382 AAACACAGCTAAATCGGTCG 59 20864001 20864019 TTGAACGGCGGATATTGGA 59 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 1 3 3 91 3R 21133344 21133422 TACTGCTGAAGGATGGCAG 59 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG10550 FBgn0039321 FBtr0084859,FBtr0084857,FBtr0084858 3 3 3 93 3R 21133345 21133424 TATACTGCTGAAGGATGGCA 58 21133271 21133289 CATGCCATCGATCACATCC 58 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 1 3 5 88 3R 21711544 21711628 GGAACCAACGGATAAATTCG 57 21711678 21711697 AGAACATGATGAGCAGTGAG 57 NA Drosophila melanogaster 61 CG42498 FBgn0260224 FBtr0300624 2 1 1 60 3R 21883671 21883689 TGGTTGTGCACTTTCAGTC 58 21883629 21883647 AAGAAGGAGGTGATGGCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 1 1 1 76 3R 22460623 22460644 ACATTGGTTATATCATGCTGGG 58 22460736 22460754 ATACTGGTAGCCCAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193 1 1 2 85 3R 23136546 23136564 CATAGCCTCCAAGGTGGAC 59 23136422 23136498 CAAAGCAATCCTGGTCATCG 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 1 5 5 80 3R 23392369 23392389 GCGATTCATTTACGAAACGGA 59 23392245 23392329 GCGAATCCGTTGATGATACTG 59 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 1 3 3 124 3R 23512758 23512776 ATGACACCCAATTTGTCGA 57 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 1 2 3 131 3R 24027914 24027932 ATCTGAGTGCCGAAATCGA 59 24052504 24060800 CCTCCGCTTTCTTAAAGCC 58 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 3 2 4 82 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350955 24350973 GAGTGTCGTAGTACCAGCT 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 2 2 13 80 3R 24728517 24745223 GACGACTATCTAACAGCAAAGC 59 24745264 24745282 ATGGAGAATGTCTCCGGTG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 3 2 4 90 3R 24941219 24941298 CCAAGAAGGGTATTGAGGC 57 24941352 24941370 TGGGTCTTTCGTACAGAGG 58 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 2 3 3 110 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046234 25046252 CCGAACTTGAAGTTGTCGG 59 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475,FBtr0085474 3 2 2 228 3R 25566675 25566754 CATAACTGTGCTGTGCGTG 59 25567005 25567023 CCTCATCGTAGCGAATCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 1 4 5 81 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548 2 1 3 81 3R 25823863 25823883 AAATAAACCAGAGCACAGCTC 59 25823926 25824008 TGTCGGTTCTCCCTTTCTC 59 NA InUTR Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602 3 1 2 93 3R 25843413 25843431 GCAAAGTAGCCATAGCAGC 59 25842588 25843358 GACCTCCACCTTCTGATAGAC 59 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 2 4 5 82 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211909 26211927 CCTTGATCTCCAGGTCGAG 59 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681,FBtr0085683 3 3 3 151 3R 26351985 26352003 GACTTCTACGGTCTGCTCC 59 26345475 26348958 TCCTTGGCCTCCTTTAACTG 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 1 10 12 113 3R 26398693 26398711 TGGTGGAGAAGAACTCGTC 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 3 4 4 115 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 3 1 1 221 3R 27594042 27594118 GGCCCATCCAATTAATGGC 59 27594303 27594321 GACATAGACACCGGACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 1 4 8 80 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162747 162839 CAGATGAACCCAACAAGTCAC 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 2 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462 3 1 3 106 4 272789 273461 TAAGCCTGAACGACCTAACC 59 272702 272723 AACCCGACATCTTAATATTGCG 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 2 4 4 81 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383642 TGTAGAACTGTGCAACGAG 57 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 2 4 4 83 4 596940 597611 TTAACGGAAACGATGACCA 57 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 2 3 5 116 4 886473 886570 CACTTGGCAATAACCGCTC 59 886375 886395 GGTATATCGGATGATAGGCCG 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 1 2 5 80 4 1040635 1042881 CATGTGTTCTAACGAAACTGC 58 1040575 1040594 GGGTTTCTCCTCCTAAAGGT 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 1 4 7 147 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079844 1079865 AAGCTCACTGTATGAAGAACTC 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100346,FBtr0089327 1 2 8 133 4 1130210 1131408 TAATCACTACTCCGCAGGC 59 1131503 1131922 AGGACGAATTTATCAAGCCAC 58 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 1 4 4 121 U 1092307 1092326 CCAGATCTAAGTTGCGATCC 58 1092152 1092226 TAAAGAGAATTCACTGCTCGAC 58 NA Drosophila melanogaster 61 CG13375 FBgn0040370 FBtr0070103,FBtr0300326 1 2 2 80 X 181069 181374 AACTGAGCGAGAGGTTGAG 59 181007 181026 GCTGAAGCCTCTACAAATCC 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 2 6 8 85 X 398749 398768 TCAAGAAGCAGTTCAATGGG 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 2 3 3 66 X 520388 520548 AAACAACACAAACAGCTTCC 57 520577 520595 CTTCAGCAGCTTCTTGGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114559 1 1 3 80 X 528646 528664 CTCTTAAGTTGACCCGGGA 58 528508 528604 GCGACAGAAATTTATTCCGGT 59 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114559 3 1 3 82 X 528649 528667 ATGCTCTTAAGTTGACCCG 57 528509 528605 CGACAGAAATTTATTCCGGTG 57 NA Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 2 2 2 84 X 712815 712892 GCGATCCTAACTGTGTTCTG 58 712750 712768 GTGTGCATAGAGGAAAGCG 59 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 3 3 3 95 X 1376771 1376789 GTCAACATCCTCAACCTGG 58 1376502 1376712 GATGACGAAGATGTCCGAG 57 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 77 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 1 2 2 282 X 2011721 2011739 CAAAGACGTCAGCGATGAG 59 2011394 2011412 TTCATCCAGTCTGTCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 3 4 12 122 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215083 TACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 1 2 2 74 X 3685389 3685407 ATATACTGGGCGCCATGTC 59 3685518 3685537 TGATGTTACCCGGATTTGAC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 yin FBgn0015565 FBtr0070631 3 1 3 125 X 3759469 3761986 GATTCTCAAATTGCGCCAC 58 3759303 3759321 TTTGTTGGTGAGGTACAGC 58 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 2 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016107 TCTAGCTGTCGAGTAGTCG 58 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 3 3 3 86 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037707 4037725 TTACCTCGCACATTACCAC 57 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 1 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Cdk7 FBgn0015617 FBtr0070756 3 1 1 183 X 5202872 5202890 CCAAGCTATCCTTCCTCGG 59 5202636 5202654 ATATTCTCGTGCTGCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083 3 1 2 102 X 5601443 5601461 CACGATAATCGCCAACTGG 59 5601527 5601601 GCAACCAACTTTCTTGCAG 58 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 3 3 3 92 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654770 5654791 CATGTATAACTCCATCTCCTCG 58 NA Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070870 2 1 2 171 X 5956895 5957119 AGATGACTCACGTCTTGGC 59 5957254 5957272 GTAGGTGGACATGGTCACC 59 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0112953 3 1 2 95 X 6009596 6012161 CAGTATTCCAAATACTGACGC 57 6009521 6009539 GTGCCACAAAGTACAATGC 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323 3 1 6 122 X 6470594 6470833 CAACTCTTGGTGAAGACCAC 58 6470918 6470936 TGTAACTGGTGCTGAGGAG 59 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 2 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035 3 1 2 119 X 6886906 6887221 TTCACAGTGGTACGTGACC 59 6886805 6886823 CACCCACTGGTAGTATGCA 59 NA Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300759,FBtr0300760 3 2 2 96 X 6917121 6925880 ATTTATGCCAAGGGTTACGC 59 6917044 6917064 TTGGCATCAAATAGTGACTGG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 1 7 21 192 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 1 6 6 80 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879519 7879538 GAATCGGTTCCATCATCCAG 58 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 1 6 6 115 X 7944306 7944477 CAAGAAAGATGAGTCCGCT 57 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 1 3 3 90 X 7991393 7991476 AATCATCAGGATTATTTGGGCG 59 7991324 7991342 TGACCATGTCCACCAAGAC 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 3 2 2 93 X 8985202 8985453 CCACAGCGTATTGAGAATGC 59 8985509 8985527 AATCGACCTTGATGCTGCT 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722 2 1 3 94 X 9575232 9575314 GCAAATGAATTTCCGTCCG 58 9575156 9575174 GCTGAGGATTGTTACCACC 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 2 3 4 89 X 9673267 9674283 CGAATGAGAGTCGTGTTCC 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633 1 1 8 80 X 10201977 10201997 GATATTACAATGGGCATCGCC 59 10173216 10201938 TTCCATCATCTGTTTAACGTGG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 1 3 3 80 X 10373679 10373697 TGAAGTACTTGTTCCGCGA 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 2 3 3 81 X 10373678 10373696 CTGAAGTACTTGTTCCGCG 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 2 2 3 81 X 11494346 11498352 AGATATTTGACAAGCACGACTC 58 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073562 3 1 6 133 X 11689029 11689146 AGTTTGTTCCAAGGCTATATGG 58 11694046 11694064 ATTCTCAGGCTCTTCGTCC 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 2 4 10 85 X 11856106 11856124 GACCCGTGGAACATATTCG 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 1 6 7 80 X 12168210 12168229 GATTCCCGTTGCGTAATTCC 59 12168266 12170561 GTTTATCTATGTGAAACCTGGATGG 60 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 2 4 4 81 X 12550120 12550139 GAACTATTGTCGTAGCCTGC 58 12550183 12550382 CGTTCTGAACAGTATGCGG 59 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 3 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 1 6 6 82 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268333 ATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 Ste:CG33244 FBgn0053244 FBtr0300093 3 1 1 60 X 13945271 13945289 AGTGAACTGGCAACATGTC 58 13945172 13945190 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009 1 1 2 116 X 14894755 14894773 CCAAATTTCGTCGCACTCC 59 14894853 14896157 TGGCTGGTAGCTTAGTTCG 59 NA Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0112984 2 1 2 95 X 15036825 15036843 CGATGATCAGAAGCTGGGT 59 15036023 15036769 GTTCGGTTTATATGGGAGTTGC 59 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 2 3 3 85 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219667 15219691 CTCTTGTAGTTCTAGTTTCTTCAGC 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328 3 2 5 90 X 15271599 15271618 CTCATCATCCTGCGATTCTC 58 15265713 15266196 GATATCACCATTCTGACGTGC 59 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 3 2 2 113 X 15743035 15743177 CGGAATTACCTACATCCAATACTC 59 15742945 15742963 GTGAACTTCACATGGCTCG 59 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951,FBtr0299950 1 2 3 114 X 15991595 15991743 GATCAATGTGCTCGACCAC 59 15991499 15991518 CATGAGCGTAAATGGGTGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 2 2 3 80 X 16323429 16324661 CTAACAGTCTATCCACTGCC 57 16324701 16324722 TATGGACTTCATCTGATAGTCG 57 NA Drosophila melanogaster 61 CG10597 FBgn0030832 FBtr0074398 3 1 2 113 X 17125090 17125246 CGAAGCAAATTGATGCATCAC 59 17124997 17125015 AAGATCCTTAGCGCTCCTC 59 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 2 2 2 116 X 17568968 17569360 ATTACCTGATGACCAGGGAG 58 17568871 17568889 TACCAGTACCTCCAGTTGC 58 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 1 2 6 80 X 17794853 17797990 TTCACCCAGGCATATAGCA 58 17798034 17798052 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 2 8 8 83 X 17844789 17845234 TAACTGTCAGGTTCCTCGC 59 17844724 17844744 GAATGATGGCGATTATGTCGA 58 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089576 1 1 2 151 X 17983950 17984026 TACCCAAACTGCCTACCAG 59 17983817 17983837 CACTTGGATTTGTGATGTTGC 58 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 1 3 3 80 X 18095254 18095333 ACCAGATGGTAGGACAACAG 59 18095373 18095394 CCATCTGATCGAAGATCTTGTC 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 2 3 6 117 X 18302639 18302657 CCTATGCCAGTTTAGGCAG 58 18301908 18302558 CTCATCTCGCATTGGTAGG 57 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616,FBtr0301545 3 2 2 98 X 18534439 18541236 CTGTAGTGTAACGGTGCAG 58 18534359 18534377 TACTTCTCCTTGCCCAGAG 58 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 3 2 4 232 X 18691376 18691394 CTAAACCAACGTTAGCCGC 59 18690126 18690145 TTCGATGGTCTTGGTCTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862 2 1 6 80 X 19418187 19422684 CGATGACAAGAAGAATAGGCA 58 19422725 19422744 TTGGAAAGCACATCATCCAC 58 NA Drosophila melanogaster 61 CG33932 FBgn0066303 FBtr0091936 3 1 1 60 X 19638687 19638706 CTACATCACCAGCAAGACAG 58 19638802 19638820 GTTAATCAGCTCCTCGCAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 1 1 1 61 X 20052023 20052043 GGAGATCCAGAATAACTGCGA 59 20051849 20051867 GATCGTCGTTCTTGTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 sw FBgn0003654 FBtr0089398 1 1 13 80 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101661 20104507 TCGTCGTCTCCATAATAATCC 57 NA Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 2 2 2 98 X 20919537 20919555 CTCAAGTCGGATGCAACTG 58 20919616 20919701 CAGGACAGAACCATCATCCT 59 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 1 2 4 115 X 20990665 20990689 CTCTAATAATGATATCCTCCAAGCG 59 20990877 20991013 CTTTCAGCTCCAGTTTGGTC 59 NA Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 1 2 2 81 X 22386913 22387149 CACCATCAAATTTCAACCACC 58 22386852 22386870 AAGTTCACGATTCTTGGGC 58 NA Nonspecific Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113682 1 1 3 80 XHet 14996 20031 CCCAACGGTAATGAATGGG 58 20075 20093 AGTACAGTTACGGGCATCG 59 NA Drosophila melanogaster 61 snmRNA:430:CR33732 FBgn0053732 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A1666a FBgn0063377 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V4:70BCa FBgn0012009 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-316 FBgn0067688 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG14613 FBgn0031188 FBtr0077367 3 1 1 81 X 21873120 21873201 TACTACCTGTCAAAGAGTGGC 59 21873059 21873080 GCACCTTCTCAATGATGTTCTC 59 NA Drosophila melanogaster 61 Hlc FBgn0001565 FBtr0077221 2 1 1 80 X 21258046 21258069 CTTATTGAAGCTGAGACTCATACG 59 21257794 21258010 AACAATCGAACCTTGTAACACC 59 NA Drosophila melanogaster 61 obst-A FBgn0031097 FBtr0077334 3 1 1 102 X 20112262 20112280 TCTTCGATCCACTCAACCG 59 20112691 20112709 CAGTACTTGCTGGACTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 AnnX FBgn0000084 FBtr0070025,FBtr0301931 1 2 2 100 X 20066407 20066425 GAGTACAAGGTGCTCTCCG 59 20066243 20066343 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 Or19b FBgn0062565 FBtr0070003 3 1 1 212 X 19989479 19989497 CGGAGACCCTTCTTCTCTG 59 19989671 19989744 CCTTAATCATCACCGTGAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 2 2 2 134 X 19729780 19729799 AATCACTGCTGGTTGATGAG 58 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 Ranbp21 FBgn0031051 FBtr0074759 2 1 1 108 X 19545511 19545529 GCATTGGTCACAGACAACG 59 19545336 19545440 CTAGCTAGCGTCTACCTCTG 58 NA InUTR Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 1 2 2 111 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362443 ATTGGCATACGCATCATCC 58 NA Drosophila melanogaster 61 CG7914 FBgn0030995 FBtr0074696 3 1 1 67 X 19087002 19087020 GCAATACGTACACGAACCG 59 19086953 19086971 GTGCAATAGCAACTCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6696 FBgn0030947 FBtr0074611 1 1 1 91 X 18554695 18555283 ATAGAGCCATTGGATCCGT 58 18554622 18554640 TCCTGTTCGTACATCTCGT 58 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 2 3 3 108 X 18461161 18461554 GACTACTTGAGATTGTTTGGCA 59 18461620 18461641 ACTCCAAGTGATAGACATTGGT 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112878,FBtr0074554 1 4 9 121 X 18269410 18269884 TACAACACCAACAACAGCG 59 18269969 18269987 AGGCACTTGATGTACTCCT 58 NA Nonspecific Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 1 3 3 80 X 18095254 18095333 ACCAGATGGTAGGACAACAG 59 18095373 18095394 CCATCTGATCGAAGATCTTGTC 58 NA Drosophila melanogaster 61 CG6867 FBgn0030887 FBtr0089574 2 1 1 80 X 17919985 17920076 CTTCTATAACAGACATCCAAGTGC 59 17920115 17920133 TGCAGCTCAAATTCAGGGA 59 NA Drosophila melanogaster 61 CG6398 FBgn0030870 FBtr0074462 2 1 1 82 X 17734950 17735030 CCTGATGCCAGTTTACTCG 58 17735076 17735094 AAGGTCCTGGGTAGATCTG 57 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 1 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA Drosophila melanogaster 61 CG9777 FBgn0030764 FBtr0074287 3 1 1 72 X 16525851 16525869 GGCATGGAAAGAAGTTCCC 58 16525733 16525752 GGAAGTATCCATCACAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281,FBtr0074279 3 2 3 90 X 16342748 16343911 TTATGAACACGCTAGAAGCG 58 16343964 16343982 CAAATTGCCGACAAATGCG 59 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 3 3 3 125 X 16281541 16281559 TGATAATCATCGGCACGCT 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 sl FBgn0003416 FBtr0074230 3 1 1 120 X 16246751 16246834 GGAAACTTGAAGGTGGCAG 59 16246916 16246936 AACGAAAGGCTATAGTCTCCC 59 NA Drosophila melanogaster 61 caz FBgn0011571 FBtr0074217 1 1 1 80 X 16186611 16186629 TGATGGTGACTGGAAATGC 58 16186670 16186933 TTGGGAGTCTTACATCTATTGC 58 NA Drosophila melanogaster 61 CG12698 FBgn0030721 FBtr0074139 2 1 1 80 X 15901024 15901045 GGATTGCATTGGTGATATTGAC 58 15901084 15901155 AGGAGTTCGCAATAAGTTGTG 59 NA Drosophila melanogaster 61 CG33173 FBgn0053173 FBtr0074093 1 1 1 80 X 15671577 15671657 CATGGTCAATCGCTATCAAGTC 59 15671698 15671716 CCGAGAATCGTCTTCAGCA 59 NA Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059,FBtr0074058 2 2 2 92 X 15597345 15597614 CAAATCTGATCGGCTACGC 59 15597271 15597289 TTACATAACACCAGCCGGA 58 NA Drosophila melanogaster 61 CG18210 FBgn0030636 FBtr0074081 1 1 1 81 X 15334555 15334573 AAAGGATGAAGGACTGCTG 57 15314735 15315622 TTTATGCTGCGTAGCTGTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Pp1-13C FBgn0003132 FBtr0074017 1 1 1 98 X 15254888 15254906 CACGCAGAGGTCAAATGTC 59 15254739 15254829 GGACAAATTCTCGCTTCTTCTC 59 NA InUTR Drosophila melanogaster 61 CG14407 FBgn0030584 FBtr0073989 1 1 1 83 X 14731898 14731916 CAGATTATGCGGATGCACG 59 14731773 14731852 GTAGTCCTTGACACCCTGTC 59 NA Drosophila melanogaster 61 CG18157 FBgn0030563 FBtr0073919 3 1 1 60 X 14209293 14209315 CCATGTTACCGTTGAAGAATCTC 59 14209255 14209275 GAATCGGAGAACTTGATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 1 2 2 152 X 13890549 13892140 GTTACGATCTCAACGAGAAGG 58 13892254 13892272 GAATGGCATTGATCCCAGG 58 NA InUTR Drosophila melanogaster 61 CG42629 FBgn0261388 FBtr0302270 2 1 1 80 X 12968591 12968609 GACACATTCCGAGTTCTGC 58 12968650 12968820 ACATAGTAACCCTGGTATGGAG 58 NA Drosophila melanogaster 61 CG32649 FBgn0052649 FBtr0073697 1 1 1 81 X 12793481 12793566 TTCGATCTGAGCTACGAGC 59 12793418 12793437 ACTCAATCTCGAAGAGCTCG 59 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 3 1 1 138 X 12447526 12447655 TGGCAACTACAACTTCGGT 59 12447757 12447775 GTACTGCTTGCCATCATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2577 FBgn0030384 FBtr0073643 1 1 1 60 X 12268226 12268246 CGTGTATTTCCACCTAAACAG 57 12268268 12268286 CTTTGATGATCGGCTCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gd FBgn0000808 FBtr0073583 2 1 1 80 X 11881444 11881514 CCACCACGAACTATCTGGG 59 11881382 11881401 GGATCTTATACAGCACCGGT 59 NA Drosophila melanogaster 61 Sclp FBgn0030357 FBtr0302182,FBtr0073591 2 2 2 81 X 11816311 11816329 AATCTCAGTGGCAATGTGC 58 11816184 11816271 GTGACAGATTAAGATCTGTGATGG 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451,FBtr0114452 2 2 2 83 X 11774956 11775260 CATATCCAAGTGGAAGAACCTG 58 11774894 11774912 AGCCAGGCAAAGTAGAGTG 59 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0090002,FBtr0301501 2 3 3 80 X 11592459 11592544 GATATTTCAGAGGATCCCAAGG 58 11592583 11592603 TACTTCCTTGACGGTTATACG 57 NA Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073504,FBtr0073503 3 2 2 79 X 11376586 11376604 CACTACTACGCCTTTGTGC 59 11376743 11376761 ATCTTCAGCTTGAGCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Rab9Fb FBgn0052670 FBtr0073401 3 1 1 60 X 10846070 10846093 CAAGTGTGATGATCTGGATAATCG 59 10846033 10846053 ATTGGCATAGTTGAAACCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 2 2 2 150 X 10842532 10842550 AATCCAGAGTGCAGTCACC 59 10842664 10854646 CTTCGATTGTGACTTGCGG 59 NA Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 1 2 2 60 X 9481077 9481095 GCCATACTCAATGACACCA 57 9481119 9481137 TGCAGTTGTGATTCTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0320 FBgn0028327 FBtr0071372 2 1 1 167 X 9447522 9447543 GCATCTGATGTTCCTAATGCTG 59 9446708 9446726 CTATCCTCGTCCGCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 mei-P26 FBgn0026206 FBtr0071303 2 1 1 80 X 9064560 9064752 CCATGTAAAGGTTTCCCGC 59 9064793 9064814 TGATGATTATTCTTTGCCAGCG 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662,FBtr0302663 2 6 6 91 X 8915676 8915767 GCGATGTTCAAGTGAATCC 57 8915820 8915840 CTCCTTGTCATAGTGGTACTG 57 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0071215,FBtr0300751,FBtr0071214,FBtr0300750,FBtr0071216 1 6 6 80 X 8481545 8481627 CTGATCAGCAATAGCAAGGAG 58 8481669 8481687 GTTCACCGGGAAGTAGGTC 59 NA Drosophila melanogaster 61 Cp7Fb FBgn0014465 FBtr0071201 3 1 1 88 X 8368221 8368381 AGTCAACAAAGCGGATTGC 59 8368433 8368451 GTGAAGCTACGTACCTGGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ir7e FBgn0259189 FBtr0299673 3 1 1 141 X 7774837 7774909 TTTGGAAATGTTGCGACGAG 59 7774715 7774733 TTCATAGCTGGAGGCAAGG 59 NA Drosophila melanogaster 61 CG15478 FBgn0029955 FBtr0071078 1 1 2 158 X 7611933 7611951 TAACTGTCATCGACGGCAG 59 7608494 7608512 ATGCTGTTACTGCTGTCCT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG32726 FBgn0052726 FBtr0071059 2 1 1 76 X 7319637 7319721 CTGTCTGCTGCAATTCTCC 58 7319579 7319597 TGAAGTTGCGATGATGACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4617 FBgn0029936 FBtr0071019 3 1 1 81 X 6997756 6997839 ATCTCCAGGATCTAGACTTCAC 58 6997696 6997714 GTGTTCTTGTCCCGATTGG 58 NA Drosophila melanogaster 61 CG3342 FBgn0029874 FBtr0070918 3 1 1 85 X 6421702 6421794 AAGTTGCGAAGTGAATCGG 58 6421635 6421653 AAGCTGGATGATTCGTTCG 58 NA Drosophila melanogaster 61 CG3918 FBgn0029873 FBtr0070912 3 1 1 217 X 6418794 6418812 TCACCTGACCTACCAATGC 59 6419064 6419082 TCTTGTCCTTGCTCCTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070875 1 1 2 85 X 6114597 6115423 ACCCTTCCAATATGGCTCTG 59 6115471 6115489 CAGAAAGACCACGTTGCTG 59 NA InUTR Drosophila melanogaster 61 fs(1)M3 FBgn0005390 FBtr0070892 1 1 1 80 X 5855572 5855590 GTGCTCGGAAACCAATCTC 58 5855458 5855528 GTTAGTGAGGTTCTGTGGC 58 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 3 2 3 80 X 5559770 5559788 GGAGGACTTTCTCCTGTCC 59 5559648 5559728 TTTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 Mcm3 FBgn0024332 FBtr0070762 2 1 1 91 X 5219306 5219324 TTACCATTTCCAAAGCGGG 58 5219377 5219460 TTGATCATACCTTCCGTACAC 57 NA Drosophila melanogaster 61 Tip60 FBgn0026080 FBtr0070668 3 1 1 120 X 4009128 4009146 TCAACCGGGTTATCATCGA 58 4008954 4009044 AGCGGAAATCATTTGGAGC 58 NA InUTR Drosophila melanogaster 61 fs(1)Ya FBgn0000927 FBtr0070485 2 1 1 71 X 2618390 2618409 ATGTCCTAATCATGCGACAG 57 2618500 2618518 ATTTGCCGCAACAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 1 3 3 80 X 2243029 2243047 AGTAAGCTCTTGTCCCTCG 58 2242900 2242985 ACTAGCATCCACTGGACTG 58 NA Drosophila melanogaster 61 fs(1)K10 FBgn0000810 FBtr0070396 2 1 1 226 X 2137425 2137446 CTGATCAATCAGTATCCCATCG 58 2137633 2138503 TCTGACTTGGCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 3 2 2 101 X 2045867 2045957 GCATACTGGTTCTTACACTGC 59 2045786 2045804 TATCCGCTACGTACTCTGC 58 NA Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 2 2 2 94 X 2045776 2045794 TAGCGGATAATCCACCAGC 59 2045635 2045718 TTCCACCAATCTAGCCAGC 59 NA Drosophila melanogaster 61 CG3573 FBgn0023508 FBtr0070317 1 1 1 80 X 1818755 1818775 CAAATCGGAGAAGTGAAGCAG 59 1818815 1818896 GGCGCAGTAGATGATTATGTC 59 NA Drosophila melanogaster 61 CG14811 FBgn0029590 FBtr0070373 1 1 1 60 X 1715817 1715837 ATTTCTCCCAAGCTTGTAACC 58 1715777 1715796 ATAGAAATACGACGAGGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302028,FBtr0302174,FBtr0302175 1 4 4 80 X 1643776 1643796 GCGATAATTATGGACATGCTG 57 1642313 1643736 GTTACGTGATGACTCTATGGA 57 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301844,FBtr0301842 1 6 6 115 X 1385476 1385494 TGAGCCCTTTATGGAGACC 58 1385282 1385397 CTATACCCACCAGCATCCA 58 NA Drosophila melanogaster 61 CG11379 FBgn0040362 FBtr0070198 3 1 1 60 X 1074542 1074560 CTTACTGGAGACAGGCGTC 59 1074584 1074602 ATGCCACAGTTTGCTAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 2 1 1 178 X 1054165 1056337 GATATTCGCAGTGCGTTAGC 59 1054006 1054024 GCTGGGTAACATCAGTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14632 FBgn0029538 FBtr0070193,FBtr0070192 3 2 2 163 X 787631 787649 GGAACTCGACTACCACGAC 59 787333 787504 CTCCTGCCAATTGATCTGC 59 NA Nonspecific Drosophila melanogaster 61 CG13359 FBgn0025616 FBtr0070145 3 1 1 60 X 697379 697398 AGCGGTTAATTCCCTATGTC 57 697338 697357 CACCACACTACCATATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL22 FBgn0015288 FBtr0070148 2 1 1 61 X 658362 658380 CTGCACCAACATTGCTGAG 59 657009 658340 CCTTGATGTACTTCTCGAAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CR40450 FBgn0085734 FBtr0114183 2 1 1 150 U 2073843 2073861 AACAATAGCAAGCCAGCTG 58 2073450 2073470 GATCGTCTAGTTCCATTTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Su(Ste):CR42435 FBgn0259866 FBtr0300163 1 1 1 60 U 8842105 8842124 GCAATTAAACAGATTCCGCA 57 8842145 8842165 TGAGGTGTATTAGTAGGTGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Actbeta FBgn0024913 FBtr0089209 1 1 1 86 4 1099251 1099272 GAGCAAATAAACCACATCACAG 58 1099133 1099207 CCTTATCTATTCCCTTCTCCGT 59 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129,FBtr0089128 3 2 2 81 4 398558 398576 AACTTACAAACAGCCTGCG 59 398436 398513 ATATGGGTAAGAAGGCCGT 58 NA Drosophila melanogaster 61 snoRNA:MeU5-C46 FBgn0043853 FBtr0081560 2 1 1 60 3R 3298882 3298901 ACAAGACCTAAGGCTCAGAC 59 3298841 3298860 CAGCAGCAAAGATTACAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 3 2 2 95 3R 27815039 27815114 ATTCCTAAGACGGTGCCAC 59 27815172 27815191 TACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 CG1896 FBgn0039870 FBtr0085837 2 1 1 107 3R 27570652 27570732 TGAAATTCGCTCCACATGG 58 27570802 27570821 CCTATCCACTGAGCTGTAGG 59 NA Drosophila melanogaster 61 CG11317 FBgn0039816 FBtr0085741 1 1 1 90 3R 26917833 26917854 CAACATCGAAGGAGATTAACGA 58 26917483 26917783 GTGAGTGATTCGTCGTAGTC 58 NA Drosophila melanogaster 61 CG33483 FBgn0053483 FBtr0089295 2 1 1 80 3R 26727040 26727116 CCTTTCTCTGATCACAGAAATAGC 59 26726983 26727003 TCATCAAACGCTTTATCCCAG 58 NA Drosophila melanogaster 61 CG31021 FBgn0051021 FBtr0300983 1 1 1 80 3R 26428620 26428638 TTTGTTCAATCCACTGGGC 58 26428677 26428758 CACTGTCGATTCAGTTTAAGTAGG 59 NA Drosophila melanogaster 61 PH4alphaEFB FBgn0039776 FBtr0085650 1 1 1 80 3R 26310466 26310964 CTATTCTATATGAGTGATGTGGAGC 58 26311001 26311020 TCCCTTCTTGGGAAACAGAG 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 2 5 5 82 3R 26289004 26289024 ATCTGCTCTATGACATCTCCA 58 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG34299 FBgn0085328 FBtr0112495 3 1 1 89 3R 26075493 26075514 GAAAGGAATCCAGGCAAATCTC 59 26075623 26075992 CTAAATTGGATTTGCGTTTGGG 59 NA DesignRelaxed Drosophila melanogaster 61 Bet5 FBgn0260860 FBtr0085570 3 1 1 96 3R 26006358 26006528 CTCCCTCTGGATTAAAGTTCG 58 26006586 26006604 AACTCTACCCACACCTTGG 59 NA Drosophila melanogaster 61 CG7920 FBgn0039737 FBtr0085603 1 1 1 113 3R 25837477 25837495 TGTCCTTCATCCACGTGTC 59 25837321 25837401 TGATTTGAGCCACAATGAGC 59 NA Drosophila melanogaster 61 eIF2B-alpha FBgn0039726 FBtr0085508 1 1 1 88 3R 25760793 25760866 AACTCTGGCGAAGAGATGG 59 25760723 25760741 TCCATAACATAGCCGGTGG 59 NA Drosophila melanogaster 61 dgt1 FBgn0039710 FBtr0085527 2 1 1 80 3R 25682288 25682372 ATCCTTTGAAACACGCTGG 58 25682226 25682244 GACCCTGAAGCTTGATCAG 57 NA Drosophila melanogaster 61 CG7829 FBgn0039703 FBtr0085531 1 1 2 94 3R 25642999 25643071 CTAGAAAGGTAAAGGCCATTCC 58 25642926 25642947 ACCATTCATGGACTTAAATCCC 58 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475,FBtr0085474 1 2 2 93 3R 25566675 25566754 CATAACTGTGCTGTGCGTG 59 25566811 25566888 ATACGGTGACCACGATCAG 59 NA Drosophila melanogaster 61 dgt6 FBgn0039638 FBtr0085414 1 1 1 80 3R 24954594 24954681 CAGAACAATCAATGACTCACTG 57 24954535 24954554 TTATGCGAGACATTGAATGC 57 NA Drosophila melanogaster 61 CG14523 FBgn0039612 FBtr0085349 3 1 1 60 3R 24704459 24704479 ATCTTCACAATCTGAGGACCA 58 24704419 24704437 TGAGTCTTCACCTTGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42487 FBgn0259990 FBtr0300439 1 1 1 103 3R 23784738 23784814 TTACAAACAGCACAGCCCT 59 23784653 23784671 CAAACGATTTGGTCTGCCC 59 NA Nonspecific Drosophila melanogaster 61 CG31053 FBgn0051053 FBtr0085268 1 1 1 60 3R 23753576 23753595 GATTCTATCGCCAGATGCAG 58 23753535 23753553 TTGCAGAAGCCCTTTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 1 3 3 81 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758239 23758257 GCAAACCTCGATCACAGAC 58 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 1 5 5 126 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220,FBtr0085221 2 2 2 60 3R 23527425 23527443 CAAGAATCGCAACTTCGGG 59 23527465 23527485 AAATTCCATGCCATTCTGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220 1 1 2 81 3R 23526239 23526330 AATTCGCACAAGAAGCAGC 59 23526375 23526393 CGTTGGTTTCTCCACTTCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085195 1 1 2 179 3R 23484402 23484421 TCATTGAGTGCTTGAAGCTC 58 23483669 23484200 CGAGGAATGGAGAGTAGGG 58 NA Drosophila melanogaster 61 Gr98b FBgn0046887 FBtr0085186 1 1 1 80 3R 23369025 23369043 GACCATCCTTCACATGGTC 57 23369084 23369171 ACTAAGAACCGTTCATACTGAC 58 NA Drosophila melanogaster 61 CG42534 FBgn0260487 FBtr0300898 1 1 1 83 3R 23187092 23187174 CTTCAGATAAAGATGGCCTCAC 59 23187218 23187236 ACAGGCCTATCAAGGTGTC 59 NA Drosophila melanogaster 61 CG3368 FBgn0039508 FBtr0085163 1 1 1 60 3R 23111736 23111812 GGTTAACGTTGAAGGGCTG 59 23111835 23111854 GTTTGCAATTGGTAACACCC 58 NA DesignRelaxed Drosophila melanogaster 61 Ser FBgn0004197 FBtr0085128 3 1 1 80 3R 23014179 23017241 TGTTAGTCCATAAGATATCCGC 57 23014120 23014138 TGAGTAGATGGCTGTTGGT 58 NA Drosophila melanogaster 61 CG14245 FBgn0039452 FBtr0100553 1 1 1 108 3R 22554524 22554542 CTACTCCTCCTTCTGCAGC 59 22554614 22554632 CTTCAGGTAGAAGTGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlH FBgn0051080 FBtr0085032 2 1 1 120 3R 22459522 22459603 GTCCTTATTGCTCTGTGCC 58 22459687 22459705 AAGGAGAGTAACTGGGTCC 58 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 1 2 2 111 3R 21694501 21695269 AGGGATCAGGTTGATCGTG 59 21695344 21695362 GCGATCGAGTTACCAAGTC 58 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 2 2 2 61 3R 21098601 21098619 TGTTCCGAGCCTATTCGTC 59 21098644 21098719 CGAAGGCAGCATAGAAGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11852 FBgn0039297 FBtr0084809 2 1 1 184 3R 21063494 21063569 GAATTTCCCTCCCGAACTG 58 21063716 21063735 TTAGATTCAGGGAGCCAGTG 59 NA Drosophila melanogaster 61 CG31108 FBgn0051108 FBtr0084802 3 1 1 97 3R 20941041 20941061 TTAATTTACTCTGGACGGGTG 57 20940902 20940983 CATTTCGTAGGACCTAGGGA 58 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 3 3 3 98 3R 20924346 20924364 CGCTGTGATACTCCATTCG 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 fd96Ca FBgn0004897 FBtr0084770 3 1 1 60 3R 20910307 20910325 ATAATGTTACCCTCGTCGC 57 20910349 20910367 ATTCTATTCTGCACCTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558,FBtr0112559 3 2 2 80 3R 20889823 20889905 AGACCAGAGTATACAGATTCCG 59 20889944 20889964 TTTAAGGAAATCCTTGGCCTG 58 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 3 3 3 63 3R 20877261 20878205 TACAATTGCCTGAGTCCGG 59 20878231 20878250 TGCGAAATCCCTTAAAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10845 FBgn0039246 FBtr0084713 3 1 1 60 3R 20727591 20727610 TTCGACTGACAAGGCTACTC 59 20727632 20727651 TTGATTATCACCGTCCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13643 FBgn0040601 FBtr0084722 3 1 1 93 3R 20725649 20725667 ACTACATCGACCACAACCA 58 20725513 20725595 CTAAATCTTGCTTCGAGTCGTC 59 NA Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 1 2 2 80 3R 20707546 20707637 AAATAAGCAGGTGCAGCAC 59 20707484 20707502 AAGTCGACTAGCACTTGGG 59 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 1 1 1 60 3R 20544780 20544867 CGATTCATGCTTTAGCAGC 57 20544738 20544756 GGATTGTAGGCTCCATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Wsck FBgn0046685 FBtr0084669 1 1 1 85 3R 20454380 20454451 TCAGTCTCGGATTGGTGAG 58 20454313 20454331 TAGGGATGTCACATGCTGG 59 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111013,FBtr0111012 1 2 2 149 3R 20446822 20448648 TAAGTTCCACGGAGCTCAC 59 20448761 20448779 AAAGGTGTCTCCTCGATGG 59 NA Drosophila melanogaster 61 mRpS24 FBgn0039159 FBtr0084577 1 1 1 80 3R 19988992 19989010 TCTTACCTACGAGATGGCC 58 19988873 19988949 TTCATTGTTGACGTGTTCCA 58 NA Drosophila melanogaster 61 Atg6 FBgn0010709 FBtr0084590 3 1 1 105 3R 19876177 19876253 AGTTATCTTTGCCCATCTACG 58 19876092 19876112 TTTATAGAGTCCGTAAGCCTG 57 NA Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0084521 3 1 2 181 3R 19754128 19754262 GACAGGTTGAATAGGGAAACC 58 19753967 19753985 TTGCTAATCCGTTTCACGC 59 NA InUTR Drosophila melanogaster 61 Tbp-1 FBgn0028684 FBtr0084452 2 1 1 164 3R 19578937 19579022 AAGATCAAGGTCAACAAGACAC 59 19579147 19579165 GAAATACGCCTGTCGAGTG 58 NA Drosophila melanogaster 61 CG10157 FBgn0039099 FBtr0084435 1 1 1 81 3R 19505328 19505346 ATTCTGAGGAAGTACGGCA 58 19505388 19505467 CGTTATAAACGTTATCCAGAGC 57 NA Drosophila melanogaster 61 CG10184 FBgn0039094 FBtr0084481 3 1 1 121 3R 19429612 19430544 TACTGGCAATTATGGTTCACTG 58 19429447 19429465 AGTGGCTAATTGGACTCCG 59 NA Drosophila melanogaster 61 CG10182 FBgn0039091 FBtr0084486 2 1 1 80 3R 19413137 19413226 TCTCGAACTACACCATTATGCT 59 19413078 19413099 TTACCAAGTGCATCACATAAGC 59 NA Drosophila melanogaster 61 CG10182 FBgn0039091 FBtr0084486 1 1 1 80 3R 19413138 19413227 TTCTCGAACTACACCATTATGC 58 19413079 19413099 TACCAAGTGCATCACATAAGC 58 NA Drosophila melanogaster 61 CG10170 FBgn0039085 FBtr0084420 3 1 1 100 3R 19360114 19360191 CGTCCAGGAAATGATCGAG 58 19360032 19360052 CCGAAGACATATTGTAGAGCA 57 NA Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 3 2 2 88 3R 18917605 18917623 AAGTGGGAGAACAACGAGG 59 18917675 18917787 GTGCAAACGGTGTAATCCA 58 NA Drosophila melanogaster 61 Ccap FBgn0039007 FBtr0084333 3 1 1 95 3R 18526766 18526837 ATGCATTTACAGGCTGTGG 58 18526689 18526710 TGTTATAGGGTTTCTCTTCGAC 57 NA Drosophila melanogaster 61 Dph5 FBgn0024558 FBtr0084280 2 1 1 81 3R 18408760 18408780 GATAGTGAAGCAATGCAGTCG 59 18408629 18408720 GAACTCTTGCATATCCTCAAGG 59 NA Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483 1 1 2 92 3R 18318733 18318998 AAATCATGATGTCAGACTACGG 58 18319051 18319069 CTCTTATGTTCTTGCGCCC 59 NA InUTR Drosophila melanogaster 61 Ir94c FBgn0051423 FBtr0084248 1 1 1 116 3R 17945107 17945530 CTGGATTGGAAGCAAGAACC 59 17945010 17945030 CAGTATTCATCCCGACTATGC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084024,FBtr0301585,FBtr0112916,FBtr0084019,FBtr0301587,FBtr0084020,FBtr0110939,FBtr0084021,FBtr0110937,FBtr0112915,FBtr0301586,FBtr0084018,FBtr0110938,FBtr0084022,FBtr0301589 3 16 16 121 3R 17037302 17037479 TTGATGTGATTAATCTCGCCG 59 17037562 17037580 CGATTCGTCCAGATTGCAC 59 NA Drosophila melanogaster 61 CG7009 FBgn0038861 FBtr0084029 3 1 1 128 3R 16959363 16959436 TTGCTAGAAGGTCTCACCC 58 16959253 16959272 TACGGCGATGATCTTTACCT 58 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0084015,FBtr0113258,FBtr0084014 1 3 3 60 3R 16956444 16956464 CAGTTCACTCTACAGCTTTCC 58 16956484 16956504 TTGCTTAAGATTCAGCTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7056 FBgn0038852 FBtr0084037 3 1 1 93 3R 16903112 16905928 ATGGACTGCGAAGGATTCC 59 16903037 16903057 CGAAGTTCGACATGTAGAAGC 59 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 1 3 3 84 3R 16042881 16045582 GGAAATAGGAATGAAGCCGC 59 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 CG4459 FBgn0038753 FBtr0083849 1 1 1 101 3R 15752697 15752771 CGAAACTGAACGGAATTCAC 57 15752615 15752633 GTACAGGTGGTTAGCACTG 57 NA Drosophila melanogaster 61 Nup58 FBgn0038722 FBtr0083781 1 1 1 92 3R 15471803 15471885 GCATCAAGATTAAGGAAACCCA 59 15471938 15471956 AGGAGATGGTCTTCTGCTG 58 NA Drosophila melanogaster 61 CG3739 FBgn0038702 FBtr0083757 1 1 1 80 3R 15219554 15219636 TCCCTATAACTCCTCTGTCCA 59 15219677 15219696 TCACGTTAATCACATCAGCC 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 3 3 3 80 3R 15070676 15070761 TTTACTATAACTCGTCGCAGC 58 15070616 15070634 GAGCACCATCATGATGACC 58 NA Drosophila melanogaster 61 NP15.6 FBgn0027785 FBtr0083712 2 1 1 60 3R 14853397 14853415 GTCGACGTTCTTCGTTACG 59 14853439 14853457 GTAGGCCCAGTAGAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5451 FBgn0038666 FBtr0083721 3 1 1 81 3R 14806346 14806420 TGCAAACGTTACAGGAGGA 59 14806283 14806301 CCGTTGGAGATATCCTGCA 59 NA Drosophila melanogaster 61 CG14291 FBgn0038660 FBtr0083724 1 1 1 60 3R 14737817 14737837 TGCTCAGTACATGACCATCTC 59 14737777 14737797 TAGCTCCTTCAGCATTAGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 3 1 1 177 3R 14322981 14323592 CAAGGATCAATGGCAGTGC 59 14322822 14322840 TAATTCATAACGCAGCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 2 2 2 88 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216840 14216858 TTCCAGAGAATCCTGTGGG 58 NA Drosophila melanogaster 61 CG7669 FBgn0038607 FBtr0083576 1 1 1 188 3R 14188726 14188799 ATTACGAAAGCAGCAACCA 58 14188949 14188969 GACTTCATGATCAATTCCGAC 57 NA Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 3 1 1 181 3R 14046065 14046272 GCATAATATTGTGGACAGTCCT 58 14045905 14045928 GAGGAAAGATTCACACTAATAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ald FBgn0000063 FBtr0083478 1 1 1 80 3R 13499184 13499303 ATCATGCTGGTTCATATGGC 58 13499345 13499364 GTACTGTAGTAGTTCGGTGC 57 NA Drosophila melanogaster 61 CG14329 FBgn0038525 FBtr0083463 1 1 1 76 3R 13435889 13435907 TACTACGATTCTGCGGGAG 58 13436019 13436037 ATTCCGTTTACTGTGGTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5225 FBgn0038468 FBtr0083389 3 1 1 85 3R 12855113 12855131 CAAGGGATCCAAAGGTCCA 59 12855292 12855310 GATACGTAGTGCCTGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333,FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036,FBtr0083334 3 6 6 82 3R 12457644 12457662 TCTTTGTGAACAATGCCCG 59 12457707 12457800 GATGATGTGCATGATCTGCC 59 NA Drosophila melanogaster 61 CG10345 FBgn0027562 FBtr0083360 1 1 1 82 3R 12423775 12423793 CAACTCTTCGTGCTACTGC 59 12423647 12423732 AAGGAATGTTGTAGTAACAGGG 58 NA Drosophila melanogaster 61 decay FBgn0028381 FBtr0083304 3 1 1 60 3R 12325170 12325496 CCACATTCGACAAATTCTTCTC 58 12325131 12325149 CTCTGGATGAACCAGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480,FBtr0301479 2 2 2 80 3R 11878490 11878508 GGTAACGCTAAAGGAGCTG 58 11878549 11878625 TGGGACTTTAGATATCTGGAGG 58 NA Drosophila melanogaster 61 Hel89B FBgn0022787 FBtr0301715 2 1 1 81 3R 11808224 11808311 CGCCTTGAAGCAACTTCTC 59 11808356 11808374 GCAGAAGATTAGGGCACGA 59 NA Drosophila melanogaster 61 CG9589 FBgn0038361 FBtr0083173 1 1 1 60 3R 11614892 11614910 GATTGTGTTCTTCGGACCC 58 11614931 11614952 GTTGTAGTTCCCAAAGAACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Act88F FBgn0000047 FBtr0083143 1 1 1 100 3R 11267253 11267332 ATGTACCCTGGTATTGCCG 59 11267396 11267414 GAGTACTTCCTCTCGGGTG 58 NA Drosophila melanogaster 61 CG6136 FBgn0038332 FBtr0083108 1 1 1 60 3R 11197511 11197532 ATAAGAGAAATGTCCAACCACG 58 11197472 11197490 CCGATCGTATGGAGTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 3 3 3 95 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191415 11191497 CGACCAGATTAATTTGCTCGT 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060 1 1 6 110 3R 11070024 11070100 TATGTCTAAAGCTCCTGCTG 57 11070173 11070191 GTACGATTACCCTGGTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14861 FBgn0038280 FBtr0083023 1 1 1 60 3R 10840748 10840770 AATCTGATGAGGAGATCGAAGAG 59 10840787 10840808 CAGGATGTAAAGGATGTACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 3 2 2 95 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571990 10572010 ATATCCAAATTGGGACCTCCA 59 NA Drosophila melanogaster 61 Pde6 FBgn0038237 FBtr0300330 3 1 1 93 3R 10343881 10343899 GCTAGTCAGGATCAGACGG 59 10343750 10343825 GCTCAAAGTCCGTAAAGGTG 59 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 1 5 5 80 3R 9795380 9795400 GATTCATATACACGGGCAAGG 59 9795252 9795340 CGAGTGCATACTTATCAGCAG 59 NA Drosophila melanogaster 61 CG9926 FBgn0038190 FBtr0082877 2 1 1 60 3R 9776310 9776329 GTGGAGCTAAATTCACTGGG 58 9776269 9776289 CCTCTGAATCCTTCTCATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 1 3 3 80 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610090 9610110 ATCATCGATCTGGACACTGAG 59 NA Drosophila melanogaster 61 CG12538 FBgn0038157 FBtr0082791 3 1 1 63 3R 9349191 9349209 TTGAACAAGTGTCAGCGTC 58 9349146 9349164 TTATTGGAGCACCATGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082786,FBtr0082785 2 2 2 60 3R 9252474 9252494 AGAAGGACTCCTATGTTGGTG 59 9252514 9252534 TATTTCAGGGTGAGGATACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp304a1 FBgn0038095 FBtr0082691 3 1 1 216 3R 8790891 8790909 GCTATATCCGGCAGTTCTG 57 8791088 8791173 AATGGTGTCCTTGGGTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 Spc25 FBgn0087021 FBtr0082690 1 1 1 100 3R 8787595 8787613 GCGTAAAGGCTTTGTACGA 58 8787674 8787758 CTTGACATCCAACAAATTGCTG 59 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290274,FBtr0290273,FBtr0082730 1 3 3 74 3R 8784818 8784838 AAGGCCAACATTATTCTCGAC 58 8782811 8782829 GGCACCATGATATTTGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31388 FBgn0051388 FBtr0082356 3 1 1 80 3R 7064322 7064691 CAGATACCAAATTCGTCTGTGAC 59 7064731 7064749 TAATCATGTTGCAGTGCCG 58 NA Drosophila melanogaster 61 scpr-C FBgn0037879 FBtr0082351 2 1 1 77 3R 7052000 7052018 CAAGAACCGTTATGGAGCT 57 7052059 7052077 ATGACCTTCTCGTTGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tctp FBgn0037874 FBtr0082344 2 1 1 60 3R 7036148 7036168 GACACCTACAAGATGAAGCTG 58 7036190 7036208 TGATCAGCTTTCCGTACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082330 3 1 2 88 3R 6714849 6714869 CACAAATTAGTACGCGAACGA 59 6714052 6714799 AACCTCTCCTTGAGCTTGG 59 NA InUTR Drosophila melanogaster 61 CG14686 FBgn0037832 FBtr0082274 3 1 1 99 3R 6605500 6605571 TAGCCATAAGTTCTATGCGGA 58 6605632 6605650 ATCCTTCGTGGAAGCTGTC 59 NA Drosophila melanogaster 61 CG6465 FBgn0037818 FBtr0082323 3 1 1 90 3R 6501687 6501705 GAAGCAACCTAAAGTCCCG 58 6501557 6501634 GGATATGTGCATCTCATCGG 58 NA Drosophila melanogaster 61 jumu FBgn0015396 FBtr0082237 1 1 1 80 3R 6185606 6185686 GACTTCGATATAGAGGTCGGG 59 6185727 6185746 CGAGATAATTCGACGCACTG 59 NA Drosophila melanogaster 61 CG34107 FBgn0083943 FBtr0110787 1 1 1 80 3R 6050760 6050778 AAGCCTGTCGTAAGGACTG 59 6050821 6050908 ACCTTTGAAGCTGTAGGGAC 59 NA Drosophila melanogaster 61 CG5361 FBgn0037786 FBtr0082201 2 1 1 60 3R 5899844 5899862 GGATGTCAGCGAAGAAACC 58 5899802 5899823 TTCCGCCTCATTAAATATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 3 2 2 120 3R 5566747 5566765 GTCTATCGACAGTGGACGA 58 5566849 5566923 GATCTCTGCAGGGATTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091945,FBtr0091944 2 2 4 106 3R 5182880 5182900 GATAGTAGGGCTGGCTTAGAG 59 5183728 5183746 CTGTTGACTTTGGCAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Vps16A FBgn0261241 FBtr0081979 1 1 1 80 3R 5093141 5093214 GAAATGGGTCACATATTGTGGA 58 5093254 5093273 CTGGATGCAGATAAGCTCCT 59 NA Drosophila melanogaster 61 CG8444 FBgn0037671 FBtr0081978 3 1 1 158 3R 5086477 5086719 TTTATAGCGGCCATCAATGC 59 5086840 5086858 TCCGTTCCAGTTGGTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11997 FBgn0037662 FBtr0081972 2 1 1 60 3R 5003374 5003392 GGATGTCAAGCGATACCTG 58 5003472 5003491 GCATATGGAGACGTATGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 2 2 4 130 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607991 4608009 TTGCTTTGGAGACTCACCT 58 NA Drosophila melanogaster 61 bel FBgn0000171 FBtr0081888 3 1 1 176 3R 4483879 4483897 GACTAGGGACCCTCAACAG 58 4483550 4483739 GAATCGAATTCACCACCGT 58 NA Drosophila melanogaster 61 CG10903 FBgn0037543 FBtr0081787 1 1 1 140 3R 3856793 3856874 AATATTCCACAAACACCCGC 59 3856977 3856995 GAACGCTACCTGAGAGTCC 59 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0299818,FBtr0081773 2 2 2 196 3R 3625704 3626425 CTTACGACAGTTGCCTTCC 58 3625526 3625544 GTACGACCTGTACATGTGC 58 NA Drosophila melanogaster 61 alpha-Est1 FBgn0015568 FBtr0081544 2 1 1 89 3R 3373498 3373516 TTCAATTATAGGGTGGGCG 57 3372813 3372831 CACTTGGTCCTTGAGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0113200,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 1 9 9 84 3R 2924195 2924284 CTTTGACATTGCCTCGCTG 59 2924129 2924147 TATCAGGCTGGTCACATGC 59 NA Drosophila melanogaster 61 ftz FBgn0001077 FBtr0081625 3 1 1 84 3R 2690790 2690808 TCATCGAATTGTGACAGCC 58 2690856 2691021 GTCTTTGCAATCTGATGCC 57 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081618 1 1 3 104 3R 2588653 2588672 CTTCATCGGCAAATACACTG 57 2589574 2589593 ATAAGACCGATTAGAAGCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15185 FBgn0037449 FBtr0081675 3 1 1 60 3R 2354118 2354136 CACTTCGTTCCTCAGACCA 59 2354158 2354178 TGAGCATTATGCCTAACACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp3 FBgn0011281 FBtr0078656 1 1 1 129 3R 1798843 1798940 TGACGAGAACTATCCACCG 58 1798305 1798323 CTCGTCCTCGTGAATCTCC 59 NA Drosophila melanogaster 61 CG1218 FBgn0037377 FBtr0078630 1 1 1 60 3R 1618321 1618341 CGATCCACCAGAATTTCAGAC 59 1618362 1618381 GTAACCGTAGTGAATCCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpn5 FBgn0028690 FBtr0078629 1 1 1 80 3R 1616692 1616712 AGATGTTCAAGGATAGCACCA 59 1616751 1616834 TGCGAATGTTATGCTCTATCAG 58 NA Drosophila melanogaster 61 MED27 FBgn0037359 FBtr0078712 3 1 1 80 3R 1481355 1481374 CGCTCCTACAATTACTGCTC 58 1481414 1481495 CTTATCTATGTGGTCTGGATCG 58 NA Drosophila melanogaster 61 RpL35A FBgn0037328 FBtr0078769 3 1 1 186 3R 1291675 1291694 TCTATGTCTACAAGGCCGAG 58 1291440 1291526 GATGGGTACAGCATGATGC 58 NA Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 2 2 2 118 3R 1185005 1185083 GACATAACCATGCGATCGC 59 1184905 1184923 TTGTCGCTAGAGCTAGCTG 59 NA Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 2 2 2 132 3R 1183002 1183091 GAAGCTTCCGAACTGATCC 58 1182888 1182907 TTTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078829 2 1 3 136 3R 1049081 1049099 GAAGAGCTTCGACTTTGGC 59 1048860 1048981 GTAAGTCGCCTGTATCGCT 59 NA InUTR Drosophila melanogaster 61 opa FBgn0003002 FBtr0078836 3 1 1 70 3R 693990 694009 GATAAGTCCTACACGCATCC 58 694182 694200 CTCTTCTCGTCCACATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9769 FBgn0037270 FBtr0078892 3 1 1 60 3R 539106 539125 TGCTAGACCTTATCCACTCC 58 539065 539085 TTGAACATCTGAGTGAACTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31528 FBgn0051528 FBtr0078923 2 1 1 60 3R 243180 243198 TGACTCAGATGGGCTACAG 58 243221 243240 CCCAGAGATATGAGCAGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14647 FBgn0037244 FBtr0290222 2 1 1 85 3R 227194 227327 TTTGCGCCAATATGGAAGG 58 227371 227394 GTTAACACCCTCTAGATTAGTTCG 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0078899,FBtr0301771,FBtr0301772,FBtr0300789,FBtr0113338,FBtr0078900,FBtr0078898,FBtr0078902,FBtr0301768,FBtr0301769,FBtr0113341,FBtr0078901,FBtr0113340,FBtr0078897 2 16 21 204 3R 110104 110122 GGAAACCAATTAAGTGCCG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 3 2 2 80 3R 1903 7791 CGTCAAGAACTTCTACGGT 57 7835 7853 TTCTCGTCTCCGTTAAACG 57 NA Drosophila melanogaster 61 CR33701 FBgn0053701 FBtr0091689 3 1 1 60 3L 9506838 9506859 TAGTTTCGAACTCAACTTGTCC 58 9506799 9506821 GAAGAGATAAAGTCGGTATCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr015:3L FBgn0063083 FBtr0091959 1 1 1 60 3L 7399504 7399523 TTTCCGTCAGTTAATCGAGC 58 7399546 7399564 CCACTCTTGCAGCATTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 3 1 1 84 3L 22641789 22641807 GATCTCGCAATTAGCCAGG 58 22641854 22641931 GAATTTGACGCTACCTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6914 FBgn0037172 FBtr0078515 1 1 1 102 3L 22599678 22599696 CTAGTGGTCCTACCCAGAG 57 22599762 22599780 ATCTTCTTGTGCTCCTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7133 FBgn0037150 FBtr0078485 3 1 1 60 3L 22067406 22067425 CTACGAAGATCACTACCAGG 57 22067365 22067384 CTTAATCTCACTGTCGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7407 FBgn0037134 FBtr0078440 3 1 1 221 3L 21816751 21816831 CAAGGACAAAGGCGAACTG 59 21817016 21817034 TTATGCTGGAGCCTCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cpr78E FBgn0037114 FBtr0078463 2 1 1 138 3L 21659967 21660052 TTAAGATTCTCATCGTCGCC 57 21659848 21659866 TTGTACGATCCATCCTCGT 58 NA Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 1 2 2 133 3L 21626118 21626136 TCATCACTGCCCTTCACTG 59 21625927 21626026 GTGCTGTCCATATCATTATACTGC 59 NA Drosophila melanogaster 61 CG7177 FBgn0037098 FBtr0078381 1 1 1 80 3L 21539706 21539724 AGCTCCTCATCAAGCTTCC 59 21539387 21539664 GGCTTGGTTATCTCTTGTGTC 59 NA Drosophila melanogaster 61 Pros54 FBgn0015283 FBtr0078368 2 1 1 81 3L 21530410 21530429 ATCAATCTGGTCTGCCTGAC 59 21530473 21530551 CTTCAACGGTGTTGGACAG 59 NA Drosophila melanogaster 61 CG7529 FBgn0037090 FBtr0078354 1 1 1 80 3L 21496150 21496168 GCTATCGCAGACAGATTCC 58 21496212 21496287 GCGCATCATAATAGCTTGC 57 NA Drosophila melanogaster 61 CG5656 FBgn0037083 FBtr0078396 1 1 1 86 3L 21436826 21436948 TGTCCAAGACTTATTGCGT 57 21436758 21436776 GATAGTTCGCCTTGATCCC 57 NA Drosophila melanogaster 61 CG12975 FBgn0037061 FBtr0078309 3 1 1 67 3L 21209785 21209803 AACTTCTTGACCTCCGTGG 59 21209671 21209757 TTGTTAATCGTCAGTTTCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 asparagine-synthetase FBgn0041607 FBtr0089463 2 1 1 60 3L 21166836 21166854 GGATACCTGCTCCAAAGTG 57 21166877 21166896 ACCAACTTTACCGAAACGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10581 FBgn0037046 FBtr0078326 1 1 1 75 3L 21027247 21027265 ATACTAACTGGGCCACCAG 58 21027127 21027145 GTCCTCTATCCTGCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0300055 3 1 2 171 3L 20955007 20955025 TATTGCACGGCAATATGGG 58 20954792 20954811 TTCTTGTACACCAAGGGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 1 3 3 80 3L 20426898 20426919 GTGTTCATTAAATACCTGCCTG 57 20426959 20427050 AAGGACAGCAATAAGATCCC 57 NA Drosophila melanogaster 61 CG5498 FBgn0027565 FBtr0078238 2 1 1 87 3L 20376031 20376119 AAGAATCATGAACGTCGCAG 59 20375963 20375981 GAACAACGCCACTGTTCTG 59 NA Drosophila melanogaster 61 NPFR76F FBgn0036934 FBtr0074871 2 1 1 108 3L 20067295 20067313 AGACGAGTACGAGTCACTG 58 20053820 20067225 ATCCTATCTCAGTTGATTCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Csas FBgn0052220 FBtr0074911 2 1 1 106 3L 19981432 19981509 CGCTAAGAGATCACATTATCTGC 59 19981348 19981367 TATCACCCTGCCAATCTTGG 59 NA Drosophila melanogaster 61 schuy FBgn0036925 FBtr0074899 1 1 1 206 3L 19979622 19979640 ATAGACCTTCGTTCGTGGT 58 19979808 19979891 CAGTGTTACCTTTCTGGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9330 FBgn0036888 FBtr0074940 1 1 1 91 3L 19580839 19580857 GTAGTTTCTCACGATCGCA 57 19580911 19580989 TAGTTTCCCTTGTATGCCTC 57 NA Drosophila melanogaster 61 CG9300 FBgn0036886 FBtr0074938 3 1 1 86 3L 19546271 19546289 TCATTAAGCGGGAAGAGGT 58 19546338 19546437 TATCAGACCAAATGGTCAGC 57 NA Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035,FBtr0075036 2 2 2 60 3L 19062618 19062637 ACTACTCACAAGATTTGGCC 57 19062373 19062596 CGCGCTTCCTCTATAAACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11619 FBgn0036836 FBtr0075046 1 1 1 60 3L 18979531 18979552 GGATGAGTATATGGATCTGAGG 57 18979492 18979511 GGACTGAACGAAGTTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14075 FBgn0036835 FBtr0075024 2 1 1 60 3L 18978427 18978445 GATTCCACAAGCTTTCCGC 59 18978469 18978487 ACCTTGCTGACGATTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14075 FBgn0036835 FBtr0075024 1 1 1 60 3L 18978426 18978444 GGATTCCACAAGCTTTCCG 59 18978468 18978486 CCTTGCTGACGATTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14077 FBgn0036830 FBtr0299821 2 1 1 71 3L 18906638 18906656 TAACAGCGATCCAAGGAGG 59 18906534 18906604 GTTGTGCAACAATTTGTGGT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4306 FBgn0036787 FBtr0075117 1 1 1 86 3L 18455630 18455826 ATAGACAGTCAAGAAGGCG 57 18455562 18455581 AGGAGTTGATTCAGATTCCC 57 NA Drosophila melanogaster 61 Cyp312a1 FBgn0036778 FBtr0075135 3 1 1 91 3L 18123731 18123751 AGGCGTGTATAAAGGAAACTC 58 18123600 18123681 GAAGAAGTCATTGATTGTGCAG 58 NA Drosophila melanogaster 61 CG7542 FBgn0036738 FBtr0075181 1 1 1 60 3L 17543218 17543237 TCAAGAAAGGATCATGGTGG 57 17543260 17543278 GCTGGCCATATAGTTCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 1 2 2 86 3L 17037746 17037820 TTACTTTGATCGGAGATGTACG 58 17037681 17037701 GCTTGACTATGAACTTGTTGC 58 NA Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 1 2 2 80 3L 16710876 16710894 CCTCTTTCCGGAGGATAGC 59 16710938 16711137 TTCTGTTGCGGATTTCCTG 58 NA Drosophila melanogaster 61 CG13032 FBgn0036652 FBtr0075316 1 1 1 80 3L 16668575 16668594 TCAAGAAGCTGGAAATGGAC 58 16668634 16668711 CAAATTCCTCCTTTCGAAACTC 58 NA Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 3 2 2 80 3L 16557863 16557886 GAGTACTACAAGTTTCATCAGTCG 59 16557736 16557826 GGTGTAAAGGAAACCCAATCG 59 NA Drosophila melanogaster 61 Cpr72Eb FBgn0036618 FBtr0075383 3 1 1 60 3L 16358192 16358212 GATCAGTCAGTATCACCACCA 59 16358233 16358252 TGGTGCCATGTAACCATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4962 FBgn0036597 FBtr0075471 1 1 1 60 3L 16288501 16288582 TGTTCAAACTGATTGCCCT 57 16288459 16288477 GAGATTACTCCGGCATTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG17027 FBgn0036553 FBtr0075516 1 1 1 89 3L 15974044 15974293 ATGCTAGACGACTTGTTGC 58 15974345 15974364 TGTCCTCAATGTAGAAGGCA 58 NA Drosophila melanogaster 61 CG7372 FBgn0036522 FBtr0075570 1 1 1 99 3L 15614690 15614766 AGATGACAGAGGAACCCAC 58 15614829 15614847 ATTTCTTTGTCTCCCAGCG 58 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075601 1 1 3 80 3L 15514424 15514504 CCCAAATGTTCTGTCCACC 58 15514362 15514382 TTCATCTTCGGAATTCAAGGG 58 NA InUTR Drosophila melanogaster 61 Tollo FBgn0029114 FBtr0075607 3 1 1 60 3L 15231000 15231020 AGTCTGAGTACCTTTGATGCC 59 15231038 15231060 GTATAGAGCTAGCCGTTATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tollo FBgn0029114 FBtr0075607 2 1 1 60 3L 15230739 15230758 TCCCAGAACAAGCTAAAGTC 57 15230780 15230799 CCTGAAGCTGACTATTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 2 2 2 84 3L 14989527 14989604 CAGAAGATATGGTACGCTTGG 58 14989650 14989668 GAACCAGAAGAATGCCCAG 58 NA Drosophila melanogaster 61 CG7906 FBgn0036417 FBtr0075741 2 1 1 108 3L 14230989 14231007 GTGTCCCAAAGCATCACTG 59 14231078 14231159 AACATTCTTGGTGTTGAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Sox21a FBgn0036411 FBtr0075748 1 1 1 94 3L 14099677 14099696 AATTACTCACCGAAGGACAG 57 14097948 14097966 TCGATACTTGTAGTCGGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG10116 FBgn0036367 FBtr0075824 2 1 1 84 3L 13450163 13450181 AAATGCACAGCCAATCGAG 59 13450043 13450117 GGGAATAGTTACGACTGTTGG 58 NA Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075865 2 1 2 80 3L 13380812 13380830 GATCTCGCTGTTCATGTGG 58 13380695 13380769 GACTCTGTCGGATAACCCTC 59 NA Drosophila melanogaster 61 CG42481 FBgn0259971 FBtr0300315 1 1 1 106 3L 13292082 13292100 TCTGTTGGTCATCCTCTGC 59 13291994 13292012 AGCATGGCTCGTTATAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp70A4 FBgn0259970 FBtr0300316 3 1 1 60 3L 13289865 13289886 GAGAGGTTGAAATTTGGATACG 57 13289826 13289846 GAACAATATCTGGTTCCTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rh7 FBgn0036260 FBtr0076020 1 1 1 80 3L 12160647 12161249 GGTCTGAGCAATTACAGTAATTACC 60 12160591 12160610 ATTCACCTTGGCAATGTAGC 59 NA Drosophila melanogaster 61 l(3)neo18 FBgn0011455 FBtr0076023 2 1 1 102 3L 12130868 12130945 CAGATTCGACTCCTTGAGG 57 12130784 12130802 AAATCCTGTGGTACTTGGC 57 NA Drosophila melanogaster 61 CG33500 FBgn0053500 FBtr0076094 2 1 1 79 3L 11501775 11501794 CATTCAGGTTGCGTCATCTG 59 11501836 11501854 TTGATGCTGCAGTAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wls FBgn0036141 FBtr0076219 1 1 2 82 3L 11161285 11161305 TTAGGAATATTGGCGACAAGC 58 11160695 11161247 GCGATAGATAAGACCTTCATAATGG 59 NA Drosophila melanogaster 61 CG7638 FBgn0036133 FBtr0076210 2 1 1 80 3L 11103439 11103458 TTCACCGAATATCAATGGCT 57 11103501 11103619 GTAGAAGTGGAACAGCTCG 58 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362,FBtr0076363,FBtr0076365,FBtr0076364 2 4 4 95 3L 9854167 9854186 CGGTGACTGAACTTAAGGAC 58 9854029 9854110 GCAGATTGCCAATGGTAGAG 59 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435,FBtr0110843 2 3 3 80 3L 9625377 9625397 GAAGTGGGATGAAATTTCCGT 59 9625255 9625339 GATACTATAAAGGCTTCTGTGCG 59 NA Drosophila melanogaster 61 CG3088 FBgn0036015 FBtr0076421 3 1 1 60 3L 9594050 9594068 TTCCTCGAGTCGGATTCAG 58 9594008 9594028 CGATTTCTCAGTGATGGAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33703 FBgn0053703 FBtr0091691 3 1 1 104 3L 9505616 9505634 ACTTGTAAAGTGGTTCGCA 57 9505477 9505549 AACACCAAGGTTAAGAACGA 57 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698,FBtr0076500,FBtr0076501 3 4 4 92 3L 9346923 9346999 TCATTCAGGAAGAGGGTCC 58 9346849 9346867 TGGGCGACTTAAGATTCGA 58 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076435 1 2 4 156 3L 9327884 9327902 CAAATCCAGCTATCCAGCC 58 9328022 9329824 TTGCTGTTGATTCCTGCAG 58 NA Drosophila melanogaster 61 CG5804 FBgn0035926 FBtr0076591 3 1 1 89 3L 8781533 8781617 AATATGGCCGATTTCAACGC 59 8781463 8781481 CAGGCCATAGAACTCCAGG 59 NA InUTR Drosophila melanogaster 61 CG5804 FBgn0035926 FBtr0076591 1 1 1 88 3L 8781533 8781616 ATATGGCCGATTTCAACGC 59 8781463 8781481 CAGGCCATAGAACTCCAGG 59 NA InUTR Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 2 4 4 116 3L 8463416 8463434 GCTTATACCTAGGGAGCCG 59 8463573 8463863 GGCCGTTGTCTAAAGTACTG 58 NA Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076765,FBtr0076764 2 2 2 75 3L 7968934 7968952 ATTGTACGTGTAGCCCGAC 59 7968877 7968896 AATTCATGATGGAACTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076764 3 1 2 115 3L 7968943 7968962 CAAGAGATGCATTGTACGTG 57 7968773 7968865 GATCGCTGCCACTATTCTC 58 NA Drosophila melanogaster 61 RpL18 FBgn0035753 FBtr0076892 1 1 1 132 3L 7234007 7234025 ACAAGTACGATCGCAAGGT 59 7233816 7233834 AAACGCTTCAGGATGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076945 2 1 2 90 3L 6906617 6907522 CCAACACAACTGGACATAGC 59 6906546 6906564 AACTGGTCACTATTCCCGC 59 NA Drosophila melanogaster 61 CG8519 FBgn0035711 FBtr0076942 2 1 1 81 3L 6701570 6701648 ATGTCCCAAGGCTGAAGAC 59 6701690 6701711 TATCGAGTAGACCAGCAATAGG 59 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 3 2 2 84 3L 5810733 5811005 CTCACCAGTTCACTTTCCC 58 5810667 5810685 CCTACAGGTGCCATTATGG 57 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112711,FBtr0112714,FBtr0112709,FBtr0112710,FBtr0112713 2 7 8 80 3L 5715661 5719592 GCACAATGGCATTATCAAAGG 58 5719628 5719652 TCCAAGTACATCATATCTAGATCGG 59 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 2 2 2 139 3L 5358154 5358173 ATTTCCGCTTACTGGAGGAG 59 5357301 5358052 GAATGGTGTTCTAGGCGGA 59 NA Drosophila melanogaster 61 CG15876 FBgn0035569 FBtr0073365 1 1 1 63 3L 4694370 4694388 AAACCTCGATCCTCCACAG 59 4694325 4694343 AAACGAAGATCTCCGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11586 FBgn0035520 FBtr0073243 1 1 1 108 3L 4262315 4262333 TGGGACAAGAACGAGTACG 59 4262166 4262184 TATAGTCGCGTCGCTTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 3 2 2 80 3L 4241696 4241914 AGGAAACGTACTCCATGCT 58 4241958 4241976 GGGTTACCAGTTTCTTGCA 58 NA Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 1 2 2 80 3L 4241696 4241914 AGGAAACGTACTCCATGCT 58 4241957 4241976 GGGTTACCAGTTTCTTGCAG 59 NA Drosophila melanogaster 61 CG14964 FBgn0035410 FBtr0073110 2 1 1 97 3L 3176835 3176913 GCTTTGAGGTCTCCAACAC 58 3176756 3176774 TCGATTCCAAGCTTTCACC 58 NA Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123,FBtr0073122 1 2 2 80 3L 3113975 3114050 ATACTCATCCTTGGGCTACTC 58 3113915 3113933 GTAGCGGCATCCTCTACTG 59 NA Drosophila melanogaster 61 CG9973 FBgn0035378 FBtr0113128 2 1 1 253 3L 2870167 2870185 TCAAGGTCGAGAAGTTGCT 59 2869581 2869950 CTTCTTGGACTGCTTGTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072921 2 1 3 265 3L 2488908 2488927 TATGCATTATTACCCGCTGC 58 2491125 2491143 GTATTCCGTGTAGTCCGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15820 FBgn0035312 FBtr0072913 1 1 1 83 3L 2173971 2174144 CAATGCATAAACGCCTGCA 59 2173906 2173924 CTCGATTGCCATACCAACG 59 NA InUTR Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072798,FBtr0072799 2 2 2 80 3L 1723819 1723838 GCATTAAACACCGAGTGGTC 59 1723694 1723777 CGATGTAGCCATCACAACAG 59 NA Drosophila melanogaster 61 CG12099 FBgn0035232 FBtr0072829,FBtr0072828 1 2 2 80 3L 1557837 1557855 AAGAAGCAGCCTCAATCCT 59 1557701 1557796 GTTGGTATGTAACTCACTGGAC 58 NA Drosophila melanogaster 61 CG2211 FBgn0035211 FBtr0072723 2 1 1 112 3L 1334446 1334520 TGTTTCTGTTCATCAGCCG 58 1334352 1334370 CACATTACGATGCAGAGCG 59 NA Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 2 1 1 61 3L 1206428 1206544 AAGAGTCGTTCGGCTAGAG 58 1206568 1206587 TGGAGTTCAATATCCACGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0072602,FBtr0290220 2 2 2 60 3L 711019 711039 TCCATGATAATTTCAGGGCCA 59 710979 710998 GGATATTGAATGGCGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RabX6 FBgn0035155 FBtr0072577 2 1 1 93 3L 690717 690735 TCATCACGGATACGGACAG 59 690791 690959 CAGAGTTGGAGCTTGATCTG 58 NA Drosophila melanogaster 61 CG32483 FBgn0052483 FBtr0072608 2 1 1 111 3L 689257 689275 AGTGGGAGGTGATGAAAGC 59 689111 689182 TACAGACGTTCTTCGGAGG 58 NA Drosophila melanogaster 61 CG12030 FBgn0035147 FBtr0072556 2 1 1 76 3L 650511 650589 CAAGTCTGACAAGCGTTGG 59 650629 650647 CAATCCGACCACTGATGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13876 FBgn0035109 FBtr0072484 3 1 1 84 3L 206256 206274 CTGTTCTGCTACAGTTGGC 59 206379 206397 GTAGTGATCAGACGAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7049 FBgn0035102 FBtr0072537 1 1 1 60 3L 175279 175297 TGTCACAAGTCCTACTGCT 58 175237 175255 TGTCTTCTGTGTTCTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a15Psi FBgn0033303 FBtr0088689 1 1 1 116 2R 4457166 4457189 CGGAGATCTAGAATCAAATAAGGG 58 4457264 4457396 AACGATGAGCAGACAAGAC 57 NA Drosophila melanogaster 61 Phk-3 FBgn0035089 FBtr0072404 2 1 1 126 2R 20858830 20859308 CCGGAAGAGAAATAATCCTCCA 59 20858725 20858743 CATCCACGTTGACACTGTC 58 NA InUTR Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113118 3 1 3 121 2R 20849265 20849878 GGAGGGAGCTCAGAAACTG 59 20849162 20849182 GGTGTCGTCCATAATGTTGAC 59 NA InUTR Drosophila melanogaster 61 Ance-5 FBgn0035076 FBtr0072420 3 1 1 144 2R 20776461 20776480 GATGTCATGGAGATAGCCAC 58 20776276 20776355 TTCGACACAATTCATCTGCA 58 NA Drosophila melanogaster 61 CG33988 FBgn0053988 FBtr0100033 2 1 1 237 2R 20588051 20588137 TACAGAAGAGATCAACGCG 57 20587771 20587789 CTGTAGCAGCAATCGTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG30161 FBgn0050161 FBtr0072333 3 1 1 60 2R 20551508 20551526 ACAAGATCCCAAGGACCTC 58 20551466 20551484 GTCGTTCGAAGAGAACAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fzr2 FBgn0034937 FBtr0072146 1 1 1 60 2R 19838361 19838379 CTCTGTGTACTCATGCCTC 57 19838401 19838421 CTCCAAGGAAGTGATGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3735 FBgn0034933 FBtr0072210 2 1 1 80 2R 19826122 19826196 TTGGCAGTCAAGATGATCAG 58 19826061 19826081 TCGTATTCCCGGAGTAATCTC 58 NA Drosophila melanogaster 61 eIF6 FBgn0034915 FBtr0072235 2 1 1 60 2R 19737299 19737319 AAGATTTATCGTGTGGAGGAG 57 19737259 19737278 AATCATTGCAGGCGATAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5543 FBgn0034908 FBtr0072124 2 1 1 60 2R 19697892 19697911 ATGCAACTTTAACAGGGACG 58 19697934 19697952 CTGAATGGAACCATCCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5543 FBgn0034908 FBtr0072124 1 1 1 60 2R 19698037 19698055 GTGTTCTCGTACATGGGTC 58 19698079 19698097 AAAGCTTCATGGTCTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30177 FBgn0050177 FBtr0072122 3 1 1 60 2R 19689187 19689207 CATTTACTATGGAACCCTGCT 57 19689229 19689247 CTGGTCATGTCCAATAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 egl FBgn0000562 FBtr0114586 1 1 1 80 2R 19623882 19623901 CTCAAGGGCTACTACAAGGT 58 19623759 19623841 GGAGTCACTTTGATCTTTGCT 58 NA Drosophila melanogaster 61 CG5428 FBgn0034887 FBtr0114541 2 1 1 92 2R 19570149 19570227 GAGTTCAGGTTCGTTCGAC 58 19570283 19570301 ACTATCGGACCAGAGATCG 58 NA Drosophila melanogaster 61 bw FBgn0000241 FBtr0114457,FBtr0072117 1 2 2 181 2R 19425226 19425302 GCATCTGTACTTTATGTCCCA 57 19425065 19425083 GATCGGTGATCAGCTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13539 FBgn0034833 FBtr0071998 2 1 1 60 2R 19072305 19072325 TACCTGAAGACAGTGAAGCTC 59 19072347 19072365 ACTCCTCGATGTGAATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13538 FBgn0034820 FBtr0071966 3 1 1 60 2R 18975069 18975087 TCTTCGCCAATAGCTACCG 59 18975111 18975129 TTTAGCTCCGAGGTTAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9890 FBgn0034814 FBtr0071984 2 1 1 97 2R 18951568 18951586 GTATATGGAGCACCGACTG 57 18951435 18951507 ATTCGTGGGTGTGAAACTC 58 NA Drosophila melanogaster 61 CG9895 FBgn0034810 FBtr0071986 3 1 1 101 2R 18901284 18901302 GACTCTTGGAGTCTCCGTC 59 18900670 18900689 ATTGCTATAGCCAACTGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9895 FBgn0034810 FBtr0071986 1 1 1 100 2R 18901284 18901302 GACTCTTGGAGTCTCCGTC 59 18900671 18900689 TTGCTATAGCCAACTGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 bonsai FBgn0026261 FBtr0071860 1 1 1 85 2R 18525490 18525508 GATTTAGCCAAGCTGCCTC 59 18525557 18525634 GACTCGTCGGCTTTATCCA 59 NA Drosophila melanogaster 61 CG4329 FBgn0034745 FBtr0071940 3 1 2 81 2R 18499317 18499384 TCATCATGACTGCCTCCAG 59 18499254 18499272 TGAAATTTGCGAACCAGCT 58 NA Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 2 2 2 115 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357176 18357194 GTAGGGCTATGCGAATCCT 59 NA Drosophila melanogaster 61 rad50 FBgn0034728 FBtr0301668 1 1 1 88 2R 18309498 18309572 CGAAATGGACACCAAGCAC 59 18309622 18309642 CATCCAGGGTACCTCTAAAGG 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 2 4 4 173 2R 18294822 18294971 ATTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA Drosophila melanogaster 61 CG3292 FBgn0034710 FBtr0071783 3 1 1 81 2R 18092628 18092646 CAGCTTAAGGGCAATACCG 58 18092501 18092583 AGCAGTATGTCCTGCTCAG 59 NA Drosophila melanogaster 61 CG4021 FBgn0034659 FBtr0071716 3 1 1 103 2R 17661654 17661672 TCAATCTGGAGGCGTACAG 59 17661822 17661947 CATATCGGCGACTTTGGAC 58 NA Drosophila melanogaster 61 CG30398 FBgn0050398 FBtr0071710 1 1 1 60 2R 17605993 17606011 GATGGACGACAGTTTGCAC 59 17606033 17606053 AATCTTAATGACCACTCCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30289 FBgn0050289 FBtr0071697 1 1 1 80 2R 17408729 17408750 TTATAATGGCATCACTCTCCAG 57 17408612 17408692 GGCCTAACATAATCTGAGTACTC 58 NA Drosophila melanogaster 61 CG30392 FBgn0050392 FBtr0071618 2 1 1 105 2R 17179224 17179242 GAACCATGCTGGATTACGA 57 17179077 17179155 TAGACAAAGTCAAGACCGC 57 NA Drosophila melanogaster 61 CG4038 FBgn0011824 FBtr0071639 3 1 1 282 2R 16984713 16984731 ATTTGGTAAACCTCGTGGC 58 16984115 16984134 GTTGAAGTAGGGAACATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 Cht4 FBgn0022700 FBtr0071543 2 1 1 87 2R 16953856 16953932 GATTAAGGAGACCTACGATCAG 57 16953790 16953809 AATGTCGTATGAGATGCTGG 57 NA Drosophila melanogaster 61 Cht8 FBgn0034580 FBtr0071534 3 1 1 88 2R 16949230 16949310 CTCCTCAAAGAACGTTGTCTG 59 16949357 16949378 ACGGATCAATATCCTCCATACC 59 NA Drosophila melanogaster 61 CG33704 FBgn0053704 FBtr0091692 3 1 1 60 2R 16837739 16837759 GAATATAACCATCCATTGGCG 57 16837780 16838069 GATGAGTTCGTTCCAGTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 maf-S FBgn0034534 FBtr0086230 1 1 1 85 2R 16528609 16528689 AGAAAGTCATCCCTGGCAC 59 16528737 16528756 AGATCCCTTACCGAAATGCT 58 NA Drosophila melanogaster 61 CG18065 FBgn0034519 FBtr0100677 2 1 1 61 2R 16439430 16439450 CGAGTCTAAGAAGCGATTGTG 59 16439322 16439410 CCACAGAACCCAAATTATTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 1 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific Drosophila melanogaster 61 CG16741 FBgn0042198 FBtr0086289 2 1 1 60 2R 16234786 16234807 ATTAACGATCAGGTGATCAAGC 59 16234825 16234846 TTGTGGAAGTTAAATCGTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16716 FBgn0034459 FBtr0300829 1 1 1 80 2R 15483182 15483201 TACGAGCAGAATAAGCAACC 58 15483242 15483317 TTGTATTGCCTGGAGATTCAG 58 NA Drosophila melanogaster 61 CG16926 FBgn0040732 FBtr0086499 2 1 1 80 2R 15388482 15388501 CTGGAATACAAGCCCATTGC 59 15388352 15388442 GCCATCTTAACAACACTTAGGG 59 NA Drosophila melanogaster 61 Oseg6 FBgn0034452 FBtr0086501 3 1 1 80 2R 15375302 15375320 ACTGGGCAATCATTTGCTG 59 15375186 15375262 GGAATGATATGTTCGGGAAACTG 59 NA Drosophila melanogaster 61 CG11257 FBgn0034442 FBtr0086525 2 1 1 91 2R 15278960 15278980 AATTCAGCCCATCTTGAAGAG 58 15279083 15279106 CCTTTAACCAGATATCCTCATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 FK506-bp2 FBgn0013954 FBtr0086515 2 1 1 117 2R 15177696 15177714 GGGCGTACAAGTAGTTCCA 59 15177955 15178034 CGACGAATCGAACTTGGTG 59 NA Drosophila melanogaster 61 CG18609 FBgn0034382 FBtr0086643 1 1 1 106 2R 14630986 14631063 CATACCTCAAGCGGATCCT 59 14630898 14630919 AGATCTTGCCCAATTTAAGGAC 58 NA Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086700,FBtr0086701 2 2 2 60 2R 14425570 14425588 CGAGCACATGTTGATTCTG 57 14425610 14425630 GGCAGTGATGTACTTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 Pcl FBgn0003044 FBtr0086735 2 1 1 80 2R 14026209 14026227 AGACATTACGATAGGGCCC 58 14026271 14026356 GTGCTGATGACCTCAATGG 58 NA Drosophila melanogaster 61 Dip3 FBgn0040465 FBtr0086734 1 1 1 100 2R 14016520 14016539 TCTATGATGTCAGCCATCCG 59 14016602 14016697 TTGCAGAAATCGGGAGGAG 59 NA Drosophila melanogaster 61 CG18635 FBgn0034279 FBtr0089557 1 1 1 80 2R 13656735 13656804 CAATTACGAGACCTCTGCTG 58 13656674 13656693 TGATAACTGGTGGTTATGGC 57 NA Drosophila melanogaster 61 CG14483 FBgn0034248 FBtr0086902 2 1 1 134 2R 13473412 13473430 GAAGCGGGAACTTTATCCG 58 13473296 13473314 TACTTCTTCTGCTTGCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 POSH FBgn0040294 FBtr0086828 2 1 1 114 2R 13456673 13456759 ATGCTTGCAGGACATTGTG 59 13456835 13456855 TAAGATTCGCATCAGCAAGAC 58 NA Drosophila melanogaster 61 Klp54D FBgn0004377 FBtr0086826 2 1 1 80 2R 13450775 13451241 GTTTATGCCAGACAGTATTAGC 57 13451281 13451300 TTAGCAGCCATTATGTCCAG 57 NA Drosophila melanogaster 61 RpL18A FBgn0010409 FBtr0086947 3 1 1 153 2R 13434479 13434921 AGGGATTGTTGAAGGAGTACG 59 13434346 13434365 TTGAACTTCTTCAGTTGGCG 59 NA Drosophila melanogaster 61 CG18631 FBgn0034239 FBtr0086944 3 1 1 81 2R 13430865 13430943 CTGGAATCGAGCCTTTCAG 58 13430987 13431006 ATATCGTCCTCTGGAGAAGG 58 NA Drosophila melanogaster 61 CG15605 FBgn0034196 FBtr0087002 3 1 1 61 2R 13014419 13014439 GAGTTGTAAAGAGGGACAAGG 58 13014378 13014396 CCTAAAGTATCGAGCCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087054 3 1 2 118 2R 12845594 12845615 CACCAATATTGCGATATGTACG 57 12845694 12845780 TTTAGCTGTTTGGATGCCT 57 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 1 4 4 87 2R 12746191 12746209 CTCCAGCTCTGACGATAGC 59 12746259 12746340 AGGATTGTAATCTGAGCCCG 59 NA Drosophila melanogaster 61 CG34460 FBgn0085489 FBtr0112766 1 1 1 80 2R 12714424 12714443 ATAGCCTGTTTGATCACGTG 58 12714486 12714560 TTTGCATCCGTTCTTTCCT 57 NA Drosophila melanogaster 61 CG15919 FBgn0040743 FBtr0087032 2 1 1 150 2R 12680222 12680245 CTGATGCTGACAGTAATATTGGTC 59 12680445 12680463 AGTACTTTACCCAGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4282 FBgn0034114 FBtr0087144 1 1 1 61 2R 12211737 12211817 GCAGGAACTCAAGGAACAC 58 12211842 12211860 AGTTGGGACAGGTGTAGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299972 3 1 2 89 2R 12179145 12179163 CTTTCTGGGAAGAGTTCGC 58 12179215 12179234 GTGGCACTTACCTTAAAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30100 FBgn0050100 FBtr0087140 2 1 1 123 2R 12179210 12179283 AATTCAGCTTTAAGCGCGG 59 12179370 12179388 GTCCAGATTGGACTTGCAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Jhedup FBgn0034076 FBtr0087222 2 1 1 80 2R 12004989 12005064 GTCTACAGACCGAAGAATCG 57 12005107 12005125 AGATCCGCTAAAGAAACCG 57 NA Drosophila melanogaster 61 CG8299 FBgn0034052 FBtr0087291 2 1 1 60 2R 11828460 11828478 GTTGAGCTGCAGATCATCG 59 11828418 11828439 TGTAGTCCTTGGTCAGATACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir52a FBgn0034023 FBtr0273302 2 1 1 60 2R 11387599 11387619 TACTCTTGTCGCCTCTTTCAG 59 11387639 11387659 GTTGGTCCTTGAAGAAGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a21 FBgn0033981 FBtr0087456 3 1 1 260 2R 10773508 10773526 TGATGGTATCACAATCCGG 57 10773213 10773285 GAAGGGTTTCCGATACAACC 58 NA DesignRelaxed Drosophila melanogaster 61 Adgf-E FBgn0033952 FBtr0087482 2 1 1 117 2R 10545255 10545273 GAGCATCCAGGATTCATCG 58 10544989 10545177 AGCTGGGAAACTCTTTATTCAG 58 NA Drosophila melanogaster 61 CG33468 FBgn0053468 FBtr0087503 1 1 1 119 2R 10494356 10494442 CTCCCAATAGTGCATATCCC 57 10494256 10494274 CAAAGTACTCCACTTCGGT 57 NA Drosophila melanogaster 61 mam FBgn0002643 FBtr0087598 2 1 3 131 2R 9925841 9925862 ACTCTTAATGTCCGAACTACTC 57 9926240 9926258 CCATTGTCAACATCCTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 3 1 1 90 2R 9731544 9731562 GAGTTCCTGTTCGAACGGA 59 9731401 9731490 ACATGAATGTCCAGAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13340 FBgn0033868 FBtr0087649 3 1 1 60 2R 9666114 9666132 TCTGGCAATACTACAGGCG 59 9666072 9666093 CCATTGTTGCTCAGATCATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13321 FBgn0033787 FBtr0087792 1 1 1 96 2R 8841161 8841473 CATGGGAGACTACACCTGG 59 8841533 8841551 AAAGATGGGATCCTGGTCG 59 NA InUTR Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 1 2 2 139 2R 8763437 8763613 TATTGATGTGCCAATTGCTG 57 8763255 8763274 CATACAGATCATGGTCACGA 57 NA Drosophila melanogaster 61 Cyp301a1 FBgn0033753 FBtr0087824 2 1 1 81 2R 8455034 8455055 AGTTTGGTCAAGTACAAGAGTG 58 8455097 8455169 AAGGCTCTCCATGTACTCC 58 NA Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087932 1 1 2 107 2R 8341324 8341342 GGACATTCAGGAGACGGAC 59 8352019 8352037 TCCATGTCGTACTGCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33626 FBgn0053626 FBtr0290008 1 1 1 81 2R 8297614 8297694 TATACCGAAGCCAAGAGGC 59 8297739 8297757 GGCATGTCATCTGATCAGC 58 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 2 2 2 68 2R 7869875 7869957 TGTACACAAGCGTAGTGCT 59 7869825 7869843 AGGTAGTCAGCTATGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12341 FBgn0033550 FBtr0088251 2 1 1 81 2R 6700499 6700521 CAAATCCGGCTATAGAATACGAC 59 6700386 6700458 GCCAATATTCATGGACGCC 59 NA InUTR Drosophila melanogaster 61 Git FBgn0033539 FBtr0088258 2 1 1 146 2R 6531335 6531355 TCATGGACCTATACGATGAGG 58 6531084 6531164 CCAATTTCTGACGACCCTG 58 NA Drosophila melanogaster 61 CG12896 FBgn0033521 FBtr0088315 2 1 1 183 2R 6314730 6314812 AACGTTGACGAGATTCTGAG 58 6314503 6314521 TTACTCCAGATGGCATGGA 58 NA DesignRelaxed Drosophila melanogaster 61 Prx2540-2 FBgn0033518 FBtr0088259 1 1 1 103 2R 6306821 6306904 CAACGTTGACGAGATTCTGAG 59 6307032 6307050 TCATGACCTTAGTGCCAGG 59 NA Nonspecific Drosophila melanogaster 61 CG12910 FBgn0033502 FBtr0088337 2 1 1 100 2R 6154676 6154694 GGACTACAGCAACAGTTGG 58 6154756 6155249 GGACATTACCTACGATATCCG 57 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273274,FBtr0088362 3 2 4 62 2R 6137327 6138396 ATCATCGTTCTGGTGTCCG 59 6137283 6137301 CTTGTTTCCTCCACCACTG 58 NA DesignRelaxed Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 3 2 2 73 2R 5703155 5703225 AAGATGAACTGGTTTGGCG 58 5703261 5703280 CTTTGGTTACTCAAGTCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 2 3 3 83 2R 5649052 5649133 GATATACGTTGCGGTTGTGAG 59 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 CG42382 FBgn0259728 FBtr0299994 3 1 1 140 2R 5054914 5054932 TCCGATGAAGACAGCAGTG 59 5054734 5054752 CACATCTCCCTTTCCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 ana2 FBgn0027513 FBtr0088685 1 1 1 91 2R 4786810 4786879 CAATCAAGCAGGTAGACGC 59 4786737 4786755 GAATCACTCGTGCTTGTGG 59 NA Drosophila melanogaster 61 CG14749 FBgn0033316 FBtr0088695 3 1 1 60 2R 4517189 4517209 CGGACATTTACCTTAAGCGTC 59 4517231 4517249 CTAATGATCACAGCTGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766 2 1 2 76 2R 4257373 4257447 AAATTTGATCGGAGCATGCC 59 4257316 4257334 TTCTTGGACCAATCGACCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 3 1 1 205 2R 3549605 3549672 GGAATCTATCTGCTCCGAC 57 3549841 3549859 GCTTTGATGATCTCCCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 1 2 2 80 2R 3383084 3383102 ATTTGCTGGACCTGTATCC 57 3382958 3383040 GTGGAGTGAATCTTTCCGT 57 NA Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 1 2 2 104 2R 3348838 3348856 GGGAATCGTTGAGATTGGC 59 3348697 3348772 AGACCATTGTTCTCCATTTGG 58 NA Drosophila melanogaster 61 CG11060 FBgn0033149 FBtr0089045 1 1 1 110 2R 3064508 3064526 TGATTACCGCAATCCTGTC 57 3064597 3064711 GGACTTAGATTCTGAATGTCCA 57 NA Drosophila melanogaster 61 CG12835 FBgn0033142 FBtr0089040 3 1 1 60 2R 2995162 2995181 CCCAGATAGCAAGGATCCAG 59 2995204 2995222 TTCAGGTTCCTCAGATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 2 1 1 60 2R 2495564 2495642 TTTCGGTACAAAGTCGTTGC 59 2495523 2495543 ATACCACAATACCAGTCTGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ptr FBgn0033068 FBtr0086003 3 1 1 85 2R 2071966 2071984 AAGACTCCTACTCGGTGGA 59 2071839 2071918 GCCAGCAATAATTACCTGCA 59 NA Drosophila melanogaster 61 CG7849 FBgn0033060 FBtr0085977 2 1 1 109 2R 1964601 1964674 ATTTGCAAGGGACTCAACG 58 1964741 1964765 CCTATGTTATGTAGTACGTGATCTG 58 NA Drosophila melanogaster 61 snRNA:U5:35D FBgn0003936 FBtr0080770 1 1 1 70 2L 15751659 15751679 CTGGTTTCTCTTCAATTGTCG 57 15751609 15751627 TAGAGTGTTCCTCTCCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0081385 1 2 3 99 2L 20647748 20647766 TTGAGACTTCTTGGGACCA 58 20648001 20648197 CTGCATTATAAGTGTGGAAACC 58 NA Drosophila melanogaster 61 Uhg2 FBgn0063449 FBtr0079906 3 1 1 103 2L 9894337 9894355 CGAGCACATGGATTTACCG 59 9893863 9894075 CAACGTCACTCTTATACAGTCG 59 NA Drosophila melanogaster 61 Cht3 FBgn0250907 FBtr0111127 2 1 1 89 2L 22908703 22908778 CTTGTGGTGGTAGTCTTGG 57 22908632 22908653 TGCAGGTTTATAGTTGGATTCC 58 NA Drosophila melanogaster 61 Ir40a FBgn0259683 FBtr0301086 3 1 1 80 2L 22189967 22196264 AGCCTCAATAATGTCTTGATGC 59 22189908 22189927 GTACTGCTTTGCGTATTCGG 59 NA Drosophila melanogaster 61 His4:CG33907 FBgn0053907 FBtr0091911 3 1 1 214 2L 21430043 21430061 TCTTAATTGCCTTTGGGCC 58 21429847 21429867 CGTTTCCTCGTATATGAGTCC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 His4:CG33907 FBgn0053907 FBtr0091911 1 1 1 213 2L 21430042 21430060 CTTAATTGCCTTTGGGCCG 59 21429847 21429867 CGTTTCCTCGTATATGAGTCC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 His2B:CG33908 FBgn0053908 FBtr0091912 1 1 1 60 2L 21428555 21428574 AGAAGAACATCACCAAGACC 57 21428514 21428532 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9335 FBgn0032895 FBtr0081426 1 1 1 67 2L 20852811 20856156 CATCACAGCCATAAATGAGCA 59 20856185 20856203 TTGTGTCCGAGCTACAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 2 2 2 124 2L 20760824 20763498 TTATGTGGCACTTGAAAGGT 57 20763585 20763603 ACATTGGTACACCTTGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2478 FBgn0032872 FBtr0081403 3 1 1 80 2L 20652081 20652160 GAGAATCTGGAGAGGGAACTC 59 20652021 20652042 ATGAATTGAGCAGAGCTTACTC 58 NA Drosophila melanogaster 61 CG13965 FBgn0032834 FBtr0081308 2 1 1 83 2L 19962205 19962284 ACTGAAGCTGATTGGAATCG 58 19962141 19962159 GACGCTGGAGATGATTCAG 58 NA Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 2 2 2 262 2L 19767343 19767750 TCTATCACAAGCCAGCCTG 59 19767099 19767117 TCTGGAACCAGGTCTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 2 3 3 294 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117849 19117867 ATCCATCATGACCACCTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Phlpp FBgn0032749 FBtr0081149 2 1 1 87 2L 19061892 19061972 TGTTAGAGCTCATTCTCAGC 57 19062022 19062040 GCTGCACGATCAATATCCA 58 NA Drosophila melanogaster 61 CG10470 FBgn0032746 FBtr0081146 3 1 1 156 2L 19049088 19049107 TAATAAGCTATCGGAGCCGC 60 19049226 19049295 ATGTAAGACCTTCGCCCAG 60 NA InUTR Drosophila melanogaster 61 mib2 FBgn0086442 FBtr0081142 1 1 1 98 2L 19037964 19038095 TCAAGTTGGAGTTCGTCAC 57 19038157 19038175 TGATAGTTGGGACACTGGG 58 NA Drosophila melanogaster 61 Grip71 FBgn0032705 FBtr0081099 2 1 1 82 2L 18709470 18709551 CATAGATGGCGACTCTACTC 57 18709596 18709614 TCACGGCTCCTTTATAGGA 57 NA Drosophila melanogaster 61 Gr36c FBgn0045485 FBtr0080964 1 1 1 81 2L 17181351 17181375 CTACTGGGAAATGCTACAAATACTC 60 17181412 17181488 GTTCTCAAAGGCTTCTTCGAG 59 NA Drosophila melanogaster 61 CG15136 FBgn0032625 FBtr0080954 1 1 1 146 2L 17047595 17047778 TGATGAGTTATCTACGTACACCC 59 17047471 17047489 GGATCCAGGCTGTAAACGA 59 NA Drosophila melanogaster 61 CG13272 FBgn0086673 FBtr0080914 3 1 1 171 2L 16811807 16811825 CTTTGGAGACGATTGGCAG 58 16813560 16813578 TAGCGTACTCGATCCAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13278 FBgn0032602 FBtr0080933 3 1 1 80 2L 16758783 16758802 AGGCCTTTAATCAACCAGAG 57 16758665 16758740 GACGCTCTTCAATCATCGA 57 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0080874,FBtr0080873 2 2 3 98 2L 16511442 16527403 AATATTTCGGAGCGATGGG 57 16511362 16511380 ATATCGGTGGCGAGTACTG 59 NA DesignRelaxed Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838,FBtr0080839 1 2 2 161 2L 16351951 16351971 GCTATAGGAACATATCAGCCG 58 16349356 16349374 TTAGGAGGAGTTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 c(2)M FBgn0028525 FBtr0080830 1 1 1 80 2L 16303994 16304012 AAGATGCTATCCGAATGCC 58 16304053 16304133 TTGTTCAATAGACTCGTTCAGG 59 NA Drosophila melanogaster 61 CG17328 FBgn0028895 FBtr0080829 1 1 1 70 2L 16300409 16300427 AATGTTGATGCAATGCGCT 59 16300517 16300535 AGTTGTTGCAGATCACCGA 59 NA DesignNoJunction Drosophila melanogaster 61 heix FBgn0028375 FBtr0080852 2 1 1 111 2L 16298184 16298880 AAGGATGAGGTGGTATCGC 59 16298091 16298109 AGTAGATCAGTGCCAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31822 FBgn0051822 FBtr0080813 1 1 1 77 2L 15836986 15837004 AGAGCGACAAGTTCAAGGA 59 15836833 15836851 ATAGTTGACGATGCCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 1 1 1 190 2L 14043091 14043109 ATAATGAGCGTAAGGTGGC 57 14040821 14042937 ATCCTTGGCACGACTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33681 FBgn0053681 FBtr0091661 2 1 1 94 2L 14005729 14005747 CACTGTTGGAGCTTGTAGC 58 14005802 14013475 CTCGTAATCGTTAACAGAACCG 59 NA Drosophila melanogaster 61 nimB3 FBgn0054003 FBtr0100058 2 1 1 88 2L 13967805 13967823 TGGATCCTGTTACGCAGTG 59 13967679 13967753 ATTGATGGTTTCCACGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0290000,FBtr0080467 1 2 2 60 2L 13369416 13369434 TTTATCAAGGGTCTGCCCA 59 13369457 13369476 CATGTTCGTTGCTCAAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16825 FBgn0032503 FBtr0080463 1 1 1 60 2L 13306887 13306908 GATCCGTTGTAACCTATAGCTC 58 13306924 13306947 CTATCACTCACACTATGATTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15479 FBgn0032493 FBtr0080481 3 1 1 60 2L 13234357 13234375 CCTCAAGCGTTTCCTACCA 59 13234315 13234333 AAGATGTCTTGGATGGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ACXA FBgn0040510 FBtr0080415 1 1 1 80 2L 12924116 12924194 AATGAACTACAAGCTCAACCTG 59 12924233 12924253 AGCAGGATTATGATGGACTGG 59 NA Drosophila melanogaster 61 CG6405 FBgn0032428 FBtr0080366 1 1 1 84 2L 12425214 12425232 CTGAAGAGCTTCACCAACG 58 12425278 12425352 CGTTGACAATCTTGTGTTCCA 59 NA Drosophila melanogaster 61 CG31763 FBgn0051763 FBtr0080356 2 1 1 61 2L 12374011 12374029 CATGTCCACAAACATGGCC 59 12374054 12374072 AATACGTTGCCGTTATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34163 FBgn0085192 FBtr0112354 2 1 1 101 2L 11988300 11988321 GAGATCTCCACATAAACAATGG 57 11988437 11988455 GTTCAGTTTGAGCGAAACG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572,FBtr0301171,FBtr0089573 1 3 3 80 2L 11984777 11984796 CATAAGTTCCATGGCAAGGG 59 11984654 11984735 TTTCATTAGCCCATCCTGCT 59 NA Drosophila melanogaster 61 CG14934 FBgn0032381 FBtr0080275 1 1 1 80 2L 11848350 11848369 TTCGGTGAGAAATCTGTGGA 59 11848407 11848489 CTCCTCGCCATTATAAGTAATACC 58 NA Drosophila melanogaster 61 CG42470 FBgn0259960 FBtr0300308 3 1 1 80 2L 11753391 11753465 CAAATCCATGCTTTGCAGG 58 11753329 11753349 TGGGCATTTCTATCGAATACC 58 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 2 4 4 103 2L 11258904 11258989 GAGAATACATTCGGCATGGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 Gr32a FBgn0041246 FBtr0080198 3 1 1 60 2L 11115558 11115577 TGCGATAGATAACTCCACAC 57 11115671 11115692 GATTACCAAGTATGTTGTGACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 3 2 2 71 2L 10745704 10745794 CTTCGATCCACCAAACGAG 58 10745651 10745673 CTTATGTCATCTGTGTCCATGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6431 FBgn0032289 FBtr0273319 2 1 1 80 2L 10727683 10727705 CGAGACTGTCTTCATAATACACG 59 10727742 10727843 GATAGGTAAGCATCTCGAAGGA 59 NA Drosophila melanogaster 61 CG17104 FBgn0040496 FBtr0080105 2 1 1 80 2L 10678791 10678909 TTGAGGAAACTACAGAACTGC 58 10678951 10678969 CTGTTTCAGTGGTCTCCTC 57 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819,FBtr0080101 1 2 2 80 2L 10649591 10649668 TCAATACGACCCTCACTCC 58 10649709 10649730 GCTGTGCATAGTGATAGATCTG 58 NA Drosophila melanogaster 61 LSm-4 FBgn0067622 FBtr0091657 3 1 1 64 2L 10404635 10404654 ATGTCAAAGTTGCAATGGAG 57 10404530 10404549 GGTTTATCAATTTGCACGGT 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG17768 FBgn0032240 FBtr0100253 2 1 1 60 2L 10403552 10403746 TTATTTGCACCTCAAAGGATGG 59 10403513 10403531 CCGCGGATATAACATTCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5362 FBgn0032237 FBtr0080050 3 1 1 68 2L 10394929 10396218 AATGGCTGAACCAATTCGTG 59 10394880 10394898 ATGTACAGCAGGGAGTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5056 FBgn0032231 FBtr0080003 3 1 1 60 2L 10367125 10367148 GAATCCTTTGAGATTGTTAGTCCG 59 10367166 10367185 TTTGATAGTGCTTCTGGACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GATAd FBgn0032223 FBtr0079993 3 1 1 101 2L 10335912 10336027 AAATCTGAGACCAGACCCA 57 10336092 10336110 GTGCTTAACTCCGTCAGAG 58 NA Drosophila melanogaster 61 RnrL FBgn0011703 FBtr0080059 3 1 1 87 2L 10327440 10327694 TTGATCCTGTTACTATCACCCTG 59 10327375 10327394 ATTTCTGCTGCCAAGTTGTC 59 NA Drosophila melanogaster 61 Pen FBgn0011823 FBtr0079937 1 1 1 93 2L 10058685 10058703 CAAACTGCTGCAAATGGAC 58 10058759 10058855 AACGTCAGTCTGTTGATCTG 58 NA Drosophila melanogaster 61 CG5924 FBgn0032154 FBtr0079911 1 1 1 97 2L 9892456 9892643 ACATTGAAACGCATTGCGT 59 9892377 9892397 AAAGATGAGCTCTTTGAAGCG 59 NA Drosophila melanogaster 61 Taf11 FBgn0011291 FBtr0079924 2 1 1 108 2L 9762836 9762916 GAACGAATGCAGGTTCTCG 59 9762746 9762765 TTTGCATTAGACGCTTGACG 59 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 3 3 3 62 2L 8450835 8450854 TGATAGTCTTTCTGTGCGTG 58 8450727 8450812 AAAGCGCATTTCGATAGTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 1 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 2 1 1 94 2L 8302010 8302028 GCAATTAGCTCCCGAATGG 59 8301878 8301955 TTCTGAAGAAACTCCTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8419 FBgn0031999 FBtr0079589 2 1 1 80 2L 8208591 8208665 ATCCCAAGATATCCGACTCG 59 8208708 8208726 ATAGAGGGATATCGCGCTG 59 NA Drosophila melanogaster 61 RpL36A FBgn0031980 FBtr0079546 3 1 1 89 2L 8042603 8042830 TCAAGATGGTGAACGTACC 57 8042532 8042550 ACTTCTTGTACTGCGTCAC 57 NA InUTR Drosophila melanogaster 61 CG7429 FBgn0031979 FBtr0079540 3 1 1 122 2L 8041181 8041258 GGACAAGACCCAGATACCG 59 8041344 8041362 TCCACGAACTTCGTCTCAC 59 NA Drosophila melanogaster 61 Uro FBgn0003961 FBtr0079486 3 1 1 85 2L 7780616 7780634 AGATCACTGCACAATCACG 58 7780682 7780770 TGTTTGGGATCTGTTCTCCT 59 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079478,FBtr0079479 2 2 2 80 2L 7712224 7712309 CGATGAATTCTTCCACTTGGA 58 7712348 7712369 GTTAATTGTTCCCATACCATGC 58 NA Drosophila melanogaster 61 l(2)k09022 FBgn0086451 FBtr0079343 1 1 1 156 2L 6855399 6855531 CTCAGCAACTGATCAATTGCT 59 6855649 6855667 TACCAGGCTTGAAAGGTGG 59 NA Drosophila melanogaster 61 CG34345 FBgn0085374 FBtr0112553 1 1 1 80 2L 6623762 6623784 GAATAGAACACTTCTACGACCTG 59 6623824 6623895 ACATTCGCGAACTTAGCTG 59 NA Drosophila melanogaster 61 slam FBgn0043854 FBtr0290281 2 1 1 88 2L 6375233 6375251 GTTACCTCCAGTGCATCCA 59 6375303 6375387 TCGTCGCTGGTTATCTTGG 59 NA Drosophila melanogaster 61 Ucp4B FBgn0031758 FBtr0079174,FBtr0079173 1 2 2 60 2L 5970473 5970493 TGACTTCCATTTACAGAACGG 58 5970515 5970533 GTGTTTGGAACAGTTCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dsf FBgn0015381 FBtr0079145 2 1 1 281 2L 5937208 5937226 CTGGTGTAGGTTCCACCTG 59 5937471 5937585 CCTTCCAGGATTCCTGGAG 59 NA DesignRelaxed Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 3 1 2 93 2L 5764269 5765976 ATGTTTGGCTCAATGGCTG 59 5764194 5764212 ACTCAATGTAGGCATCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG18266 FBgn0031724 FBtr0079109 2 1 1 60 2L 5598250 5598269 AACTGGATGAAACAGGTGGA 59 5598292 5598310 TGTCAAAGCCCTGATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 1 3 3 82 2L 5539759 5539779 CTTAACGAAGTACAGGATCGT 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 CG7371 FBgn0031710 FBtr0079129 3 1 1 80 2L 5522670 5522744 AAAGAATCGATACACAGCGG 58 5522609 5522628 AATAGGTATTCCCGACAGGC 59 NA Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026,FBtr0111024 2 2 2 107 2L 5077706 5077785 CAACTTCCGATGGTACCGA 59 5077617 5077635 TCGATGGAGAACAGACCAC 59 NA Drosophila melanogaster 61 CG3756 FBgn0031657 FBtr0078994 2 1 1 113 2L 4969124 4969142 GAGGAGTATCGGGTGAAGC 59 4969219 4969297 GTCTTCGTCGTTTCTGACG 59 NA Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 2 2 3 195 2L 4372531 4378918 GAACAGATTATCTATCCCGGTC 58 4379074 4379092 GATCGGTCATCATGATGCG 59 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077481,FBtr0077482,FBtr0077479 1 6 6 81 2L 4190610 4190629 TGAGGACACCATTCTGAGTC 59 4190482 4190566 TTGGCAGGTAACCAAATGC 59 NA Drosophila melanogaster 61 CG3407 FBgn0031573 FBtr0077515 3 1 1 87 2L 3811500 3811583 CACGAAAGGACACATTCCG 59 3811431 3811449 TGTGGTACTTCAGGTCACC 59 NA Drosophila melanogaster 61 CG3921 FBgn0031571 FBtr0077496 2 1 1 80 2L 3799138 3799220 TTCCACTTTGGGTCAATATCG 58 3799262 3799280 GTAACCGCTCCTTTGATCG 58 NA Drosophila melanogaster 61 Sfp24Bb FBgn0259952 FBtr0300297 3 1 1 82 2L 3669575 3669652 CAGTCGGAAGTCAAATGCT 58 3669511 3669531 ACACTCGAATAGCTATACCCT 57 NA Drosophila melanogaster 61 CG2774 FBgn0031534 FBtr0077517 3 1 1 88 2L 3451378 3451399 CGAATTGACCAGAGTTAAAGAC 57 3451447 3451529 AATAGCTGACGATCTGTTGC 58 NA Drosophila melanogaster 61 CG3347 FBgn0031513 FBtr0301033 1 1 1 131 2L 3270673 3270693 CCTGTTCTAGATACTGTTGCG 58 3270785 3270862 CATTGCCAAGCAATAAACCA 57 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 2 6 6 91 2L 3070720 3070831 AAAGGAGAAGGAAATCCAGCA 59 3070649 3070667 CTTTGTCATACGTCAGCCG 59 NA Drosophila melanogaster 61 CG15395 FBgn0031440 FBtr0114513 1 1 1 196 2L 2610236 2610256 GCAATAAGTGAGGAGTTTCCC 59 2610414 2610488 AAGCGATAGGCCTTTGGAG 59 NA Drosophila melanogaster 61 Rad1 FBgn0026778 FBtr0077747 2 1 1 111 2L 2574185 2574277 ATTATGGGATGGTGCAAGTC 58 2574093 2574111 ACACGGAACTCCATGAAGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17242 FBgn0250841 FBtr0077803 2 1 1 60 2L 2268984 2269004 GGCTTCCGTTCAAATAAACGA 59 2268944 2268968 GATATCTTCGCTGTATATCACTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15386 FBgn0040715 FBtr0077842 3 1 1 178 2L 2216940 2217013 GAGTTTCGTCAGCATATTCAC 57 2216782 2216806 GGACTTAAAGTAGGGATTACTAAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 tho2 FBgn0031390 FBtr0301660,FBtr0077853 3 2 2 80 2L 2144042 2144127 CAAGCTATACTACAAGCAGCG 59 2143982 2144003 TTTAGCTCTGTGATAAGCTTGG 58 NA Drosophila melanogaster 61 CG5561 FBgn0031333 FBtr0077947 3 1 1 81 2L 1353833 1353906 CTAGAAAGTGCTGTCTTTGATACTC 59 1353776 1353798 GTATCCTCTTATCGTAACAACGG 58 NA Drosophila melanogaster 61 Ahcy13 FBgn0014455 FBtr0074030 1 1 1 121 X 15344783 15344801 AAGTACGGCCCATCTAAGC 59 15344886 15345441 CTGGACCATTGGACCTGAG 59 NA Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 1 1 1 167 X 13054901 13054919 CACAGGGCAAGATACTGCT 59 13055049 13055124 TAATGATTTCTGTGGCAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12689 FBgn0029952 FBtr0071081 3 1 1 60 X 7479775 7479795 ACGAATAGTTGAACACCAGTC 58 7479735 7479753 GGAGTTCACAGGTCTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14052 FBgn0029606 FBtr0070394 3 1 1 116 X 2117974 2117992 CTGAGGCTCTCAATTGTGG 58 2118326 2118344 TTTCTTGTGAATGGGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32808 FBgn0052808 FBtr0070295 2 1 1 155 X 1363271 1363289 TTGAGCAAGTTTGTCCAGC 59 1363072 1363090 GGTATCGCTGAACACTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42619 FBgn0261334 FBtr0302236 2 1 1 96 U 3776164 3776182 CGAGTTCGCAACACTTAGG 59 3776032 3776104 ACCCTATTACATGTGCCCA 58 NA Drosophila melanogaster 61 CG34155 FBgn0083991 FBtr0111047 3 1 1 144 3R 26382663 26385710 CAGCATAAATTGCTGGTACCA 59 26382539 26382557 ACTCCAGATGTCATGGCTC 59 NA InUTR Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302516 2 1 3 87 3R 24852720 24852801 TCATAGAGTATCTGCGAAATGG 57 24852654 24852678 GTTTGTTATTATCCAGAGAAGTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113349 1 1 5 109 3R 21149461 21151162 ATCAAGCTTGTTGCTCAGG 58 21149370 21149391 ACTAGGTTATCATGGTACACCT 58 NA Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 2 2 2 80 3R 16419703 16419721 AACCTCGTCATTGAGCTCC 59 16419764 16432019 GAAGAGTTTGACTCCGACCT 59 NA Drosophila melanogaster 61 Sep2 FBgn0014029 FBtr0083945 1 1 1 114 3R 16413169 16413853 GTGTATAGGCGAAACCGGA 59 16413073 16413091 GTGTGCCTTCAACTTGACG 59 NA Drosophila melanogaster 61 Eh FBgn0000564 FBtr0083444 2 1 1 85 3R 13272985 13273080 GAGATTTGACTCCATGGGTG 58 13272718 13272737 AGTAATCTCCCAGCATGGTC 59 NA Drosophila melanogaster 61 CG42504 FBgn0260230 FBtr0300639 3 1 1 60 3R 7857175 7857195 TAGCCTACGAATTCCATCGAC 59 7857079 7857156 CCTAAGCAACTCCTAATACGAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 3 1 1 97 3R 6533655 6533675 CTCAGGATCATAGCAATGGAG 58 6533507 6533596 ATAGTCAGTGGCAACTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 disp FBgn0029088 FBtr0078665 3 1 1 85 3R 1680114 1680133 GCAAGCGGCTAAATATCGTC 59 1679917 1680072 CAGGTATACATTCGAGTCATTAGAC 59 NA Drosophila melanogaster 61 hkb FBgn0261434 FBtr0078951 3 1 1 140 3R 171666 171685 CAGTTAAAGGCGCTCAACAG 59 171480 171498 CACGTCGCACTTAAATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914,FBtr0078496 2 2 2 80 3L 22275924 22276013 CCAGCTATGGTAGCCTGAG 59 22276057 22276075 CCCAGTCGTACTTCTCCAC 59 NA Drosophila melanogaster 61 CG13380 FBgn0036799 FBtr0100555 1 1 1 80 3L 18594289 18594371 GGGACTTGGTCACTATTTCGA 59 18594229 18594251 GTCAGCATATAAGTGTGATTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Pros26 FBgn0002284 FBtr0075360 1 1 1 74 3L 16603349 16603367 AAGCATCCTGATTTCTCGC 58 16603218 16603236 TACGGCAAAGTCATCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075650 3 1 2 83 3L 15134499 15134517 CTTTCTCTGCGTCTTTGCG 59 15132621 15134453 GCGTCATGCACACTAATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076544 2 1 6 172 3L 9055562 9055927 GTGCCTATAGTTAAAGCAAACG 58 9055411 9055429 ATCTGGTTTAGGAGCAGGT 58 NA InUTR Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073135,FBtr0110924,FBtr0073131,FBtr0073134,FBtr0110923,FBtr0110920,FBtr0110925,FBtr0302598,FBtr0073133,FBtr0110921 3 13 13 108 3L 3598231 3598374 GAATATGTGAATACGGATCTGTCG 59 3598441 3598459 AGTAGGAGAGTCCACGGAG 59 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 1 4 4 70 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3492 FBgn0035007 FBtr0072294 2 1 1 62 2R 20360924 20360942 CAAGGAGTTCCACAAGGGA 59 20360968 20360986 TTGTACCGCTTTGACTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 2 2 2 88 2R 19132119 19132188 GATGACCGCATTTACTGCTG 59 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 CG9308 FBgn0034681 FBtr0071749 1 1 1 60 2R 17922517 17922535 ACGATCATGCCAATGTCAG 58 17922559 17922577 AAGCCACCTTCCATTACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 1 3 3 134 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592684 13593866 CTCGTTCAAATTCTGCTCGA 58 NA Drosophila melanogaster 61 CG4398 FBgn0034126 FBtr0087157 1 1 1 71 2R 12320368 12320386 AAAGTGCAGAGTTCAAGGC 58 12320539 12320557 GTTCTTGAACAACGCTCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30090 FBgn0050090 FBtr0087279 2 1 1 89 2R 11577495 11577515 TAAACTCAAATCCGTGGATGG 58 11577566 11577640 CTGTTAGGACAAACCGCTG 58 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 2 4 4 131 2R 8228645 8228732 ATTGCATATCCGTCAAGGG 57 8228532 8228550 CATTTGTGAGGGCTATGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Obp47b FBgn0033614 FBtr0088171 1 1 1 60 2R 7190194 7190212 GTCCTCCATCTTTGGACAC 57 7190089 7190107 TACTTGGAGGATGTGAGGA 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG12923 FBgn0033461 FBtr0088379 3 1 1 60 2R 5775742 5775761 CGACGAGCTGTAAGAATCCT 59 5775784 5775802 TGTTGTGCATTGTAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1599 FBgn0033452 FBtr0089394 1 1 1 109 2R 5728842 5728920 GCAATAATTCCGTTGCATTCC 59 5728753 5728773 AACGATGAAGGTTATCACCAG 58 NA Drosophila melanogaster 61 Mpp6 FBgn0032921 FBtr0081469 2 1 1 61 2L 21157382 21157400 CAAATCGGCGGAGATAGTG 58 21157422 21157443 CGTGGTTTCTTAAAGTACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17571 FBgn0259998 FBtr0081376 1 1 1 60 2L 20256574 20256592 GATGATCAACGATGTGGCC 59 20256532 20256550 GATCTTAGAGGTCTGGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5458 FBgn0032478 FBtr0080437 2 1 1 85 2L 13183656 13183840 ATATAGGCCTCTACATAGGCG 59 13183887 13183905 ATACTGATCTCCGTTGGGC 59 NA Drosophila melanogaster 61 CG31909 FBgn0051909 FBtr0300460 2 1 2 91 2L 7257630 7257708 GATTCTTGACAACAAGGTGC 57 7257762 7257780 GTTGGTTCTGAAGTTCCGA 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 CG3227 FBgn0031434 FBtr0077746 3 1 1 73 2L 2576553 2576637 CCAATATCAGCGCATAGTCAG 59 2576500 2576518 TCAGAAACAAGGGCTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 2 3 3 84 2L 862618 862637 ATTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 3 5 5 110 2L 155731 155750 ATCTCCGACTTTCAGGAGTG 59 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 2 2 2 68 2L 8088 8109 GTCAAGAAAGTCAGTGAAACCA 59 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0300960,FBtr0085780,FBtr0085779,FBtr0300961 2 4 4 80 3R 27010813 27011382 GGTGTTCCTGCATATGTCG 58 27010751 27010770 CACCATGTTCTGACTGTAGG 58 NA Drosophila melanogaster 61 CG5421 FBgn0032434 FBtr0080383 3 1 1 147 2L 12447377 12447558 ATTTGCTTGCTCACGATGC 59 12447248 12447269 TTCTTAATGGACATGTGTTGGG 59 NA Drosophila melanogaster 61 CG4030 FBgn0034585 FBtr0071640 1 1 1 86 2R 16976491 16976572 TCAAACGCTTCAGATGTCG 58 16976423 16976441 GGACAGTTGTTCACATCGT 58 NA Drosophila melanogaster 61 hyd FBgn0002431 FBtr0082090 2 1 1 80 3R 5545109 5545208 GCTATGGAAACTATACGCGAC 59 5545049 5545068 CTCATCGTCTTGATTGTGGG 58 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081759 3 1 3 106 3R 3756402 3761500 AATCGAAGAGGCTCGAGTG 59 3756314 3756332 GGTAGGTCAGGTACATGGG 58 NA Drosophila melanogaster 61 CG15443 FBgn0031609 FBtr0077450 3 1 1 89 2L 4462685 4462703 GTTCCTCCAGAGCAATGAC 58 4462554 4462633 ATGTGAGGTCCAGTTAGCTC 59 NA Drosophila melanogaster 61 CG2662 FBgn0024993 FBtr0070478 1 1 1 201 X 2592821 2592839 TGAAACAATCCAAGGACGA 57 2593004 2593087 TGTTTGGGTTTCTTCACCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10185 FBgn0038397 FBtr0083235 3 1 1 80 3R 11891829 11891941 GCACAGAAATACACGGTGG 59 11891767 11891790 GATGAAATGATTCAGGTACTCCTC 59 NA Drosophila melanogaster 61 nerfin-2 FBgn0041105 FBtr0082177 1 1 1 85 3R 5898613 5898762 TTTCGACGTCAAGCTTACC 58 5898810 5898829 TGGGACTTGAAGAAATCCAG 57 NA Drosophila melanogaster 61 CG4877 FBgn0036624 FBtr0075386,FBtr0075387 2 2 2 80 3L 16382649 16382670 CCATCTGCTAGATAGCAATCCA 59 16382711 16382787 TCCTGGTTACTGTCTTGCG 59 NA Drosophila melanogaster 61 CG14982 FBgn0035477 FBtr0073163 2 1 1 83 3L 3944548 3944566 CTATCGACCCATTAGCCCG 59 3944608 3944809 CGCTGGTAGTTGTATCTATATCGA 59 NA Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 2 1 1 118 3R 19229284 19229355 TACGGCACTCAGACATGAG 59 19229184 19229205 CACCGTAGATAAATTCTACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083698 3 1 2 231 3R 14732632 14732651 GTTCACCAAGCCAATTCGAG 59 14733023 14733042 CGTCATATACTGGTTGGCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32541 FBgn0052541 FBtr0074650 1 1 1 103 X 18905710 18905796 AACAGCAGGTTAAGTGGTC 57 18905863 18905881 ATAGTCCAGCGATGAAGTG 57 NA Nonspecific Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 1 2 2 97 X 16483581 16483673 ATGAGATAGATCAGGCGCT 58 16483502 16483522 GAACGTTGTCGTAATGAACTG 58 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074233 2 1 3 101 X 16259517 16259536 ATAGCAATTCGCCATTCGAG 58 16259673 16265362 CAAGGCGTTTGATCTCCTG 58 NA Drosophila melanogaster 61 CG9921 FBgn0030743 FBtr0074235 3 1 1 128 X 16225750 16225851 GTTCCGTTGGGATGTTTGG 59 16225640 16225660 CATAACGGTAAATCCCTGAGC 58 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 1 5 5 83 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179125 TCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151,FBtr0074152 3 2 2 76 X 15880426 15880444 CACTGACTTTCGGTTTGGC 59 15880368 15880388 ATATCGATCCATGTCGTAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 1 2 2 109 X 15411715 15413956 CGATACAGGTTCACCCTCTC 59 15411625 15411643 AAGGAGCTAGAGATTGGGC 58 NA Drosophila melanogaster 61 Ste:CG33237 FBgn0053237 FBtr0300086 1 1 1 110 X 13953671 13953689 TCTGATACACAGCTGGACG 59 13953519 13953597 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 1 7 10 111 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488375 13488394 CCTTGGAGATCTCATCCCAG 59 NA Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073684,FBtr0073683 3 2 2 127 X 12572082 12572378 ACATCCAGATACAAGACCGA 58 12572468 12572486 TTGTACTTGGGATGACGGT 58 NA Drosophila melanogaster 61 Lsp1alpha FBgn0002562 FBtr0073651 2 1 1 61 X 12384574 12384592 AGAGTACATTGCGATGGGA 58 12384617 12384702 GATCGAAGTGCGTGTAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15221 FBgn0030331 FBtr0112979 1 1 1 82 X 11628680 11628698 ATCGAGGATCAGGCATGTG 59 11628742 11628834 AAATACCAATCGCCATAGCTG 58 NA Drosophila melanogaster 61 hop FBgn0004864 FBtr0073457 1 1 1 80 X 11257453 11257539 ATCGCAACGAATGGAACTG 58 11257391 11257410 CATATTCGAACGCGGAAAGG 59 NA Drosophila melanogaster 61 CG18292 FBgn0030269 FBtr0073437 2 1 1 62 X 11032174 11032193 TTCTACAATTACCAGCAGCA 57 11032218 11032236 GGCCGATATCTGGATTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299862 3 1 2 108 X 10871823 10871841 CACGCACAATCATCATGTC 57 10863486 10871752 GAATTCCACGCAGTATTCCT 58 NA Drosophila melanogaster 61 feo FBgn0030241 FBtr0073410 3 1 1 60 X 10747701 10747720 GGATCTCACACTTAAGAGCC 57 10747660 10747679 CCAGTCGTTGTAGTAGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12640 FBgn0030202 FBtr0071464 3 1 1 100 X 10326591 10326609 GTTGGAGGTGACTTCTGCT 59 10326509 10326527 GATCATGAAACTCCTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp7Fc FBgn0014466 FBtr0071202 2 1 1 126 X 8371218 8371310 TTCACGCTGAGAATCTAAGTG 58 8371398 8371416 TTATCGTATGGCTCAACGC 58 NA Drosophila melanogaster 61 CG10777 FBgn0029979 FBtr0071132 1 1 1 105 X 7822581 7822836 CAAGATCAAGGTGGAGGAC 57 7822494 7822512 CTTTAGCACTGAATCACGC 57 NA Drosophila melanogaster 61 CheA7a FBgn0029948 FBtr0071055 3 1 1 97 X 7272419 7272533 GAGCAGAAGATTGTTCTCATGG 59 7272591 7272609 ATGAACTGACAGAACGGCT 59 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 2 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12728 FBgn0029825 FBtr0070859 1 1 1 80 X 5837258 5837278 TAGGGATTATCCATGCCAAGG 59 5837320 5837421 TTTCCACAGTCACTTTGCG 59 NA Drosophila melanogaster 61 CG11462 FBgn0029815 FBtr0070831 1 1 1 130 X 5734697 5734716 CGTTGCTCTCAGAAGTACCT 59 5734586 5734604 GAAAGGCGAACCCAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12680 FBgn0029740 FBtr0300018 3 1 1 60 X 4891975 4891995 ATTGCTTCCCATTTCACATCC 59 4892016 4892035 TTCTCTATGAGGCACTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34336 FBgn0085365 FBtr0112538 2 1 1 65 X 3763082 3763564 AACGGTTTCGAAACGAACG 59 3763035 3763054 AGTATTCCAGCTTGTAGCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14812 FBgn0026090 FBtr0070372 3 1 1 99 X 1752905 1752923 CTGGAGAAAGTCCTAGCGG 59 1752697 1752772 CAATGTCTCCTTTGGTGCC 59 NA Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947 3 1 2 94 X 371312 371646 AAGGAGGTCCATGAGAAGAC 58 371703 371721 TGTACCAATGGCTTCAGGG 59 NA Drosophila melanogaster 61 CR40621 FBgn0085757 FBtr0114207 3 1 1 60 U 9412276 9412296 CTTTCTCGAATCTATGGGTGG 58 9412318 9412336 CAGACAAATCACTCCACGA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42434 FBgn0259865 FBtr0300162 1 1 1 60 U 8685757 8685775 GACACGTTCAACCAGATGG 58 8685715 8685733 GTAGAACAATCCACGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42428 FBgn0259859 FBtr0300156 2 1 1 152 U 7863496 7863514 TGATACACAGCCATGTTCG 58 7863628 7863648 CATAGGGACTCCAAGTTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40068 FBgn0058068 FBtr0113783 1 1 1 60 U 1206514 1206533 GATTGCCAAGAAACTGGGTG 59 1206556 1206574 TGCGTTTGTTTCTTCAGGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 3 2 2 83 4 1140619 1140637 GCTCGCCTAGACTTATGTG 57 1139635 1140572 GTGCTTTGTCTTAAGGGCT 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377d FBgn0083048 FBtr0113595 1 1 1 60 3R 26032934 26032954 AGATTAACTGCCGCTAATCAC 58 26032894 26032913 GTAATGCAGTAGCCGTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742,FBtr0085743,FBtr0085744 2 3 3 74 3R 26884303 26884321 CTGCCTTGAACAAATCGGA 58 26883636 26884265 ATTTGCGTTGCCTTTCTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15548 FBgn0039812 FBtr0085731 3 1 1 60 3R 26785672 26785692 TGCTTTGTTCGATATCCTGAG 58 26785713 26785732 CTTCGCAACATTAGAGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2g FBgn0039800 FBtr0085723 1 1 1 62 3R 26570592 26570610 AAACAGACCTACACCACCC 59 26570548 26570566 GATGGTGTACGGACTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15537 FBgn0039770 FBtr0113310 1 1 1 100 3R 26261872 26261948 CTAATGGCGTTTGTCGACG 59 26261790 26261808 TTGCAGAACTCGTAAACGC 59 NA Drosophila melanogaster 61 CG34300 FBgn0085329 FBtr0112496 3 1 1 124 3R 26132010 26132081 AGCAGTATCTTGCAGATCG 57 26131904 26131923 GATTCTAGAGTGCAGAAGCT 57 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 1 3 3 145 3R 25959158 25959237 GATCAGGCTCAAGAGGTCC 59 25959031 25959049 TCTATGTCGGGCTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085590,FBtr0085589 1 2 2 60 3R 25881050 25881068 GAATGAATCCGAGGTGCTG 58 25881008 25881026 CTGCTGATCTGAGTTGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 janB FBgn0001281 FBtr0085598 1 1 1 185 3R 25864032 25864107 GTTGACAATCACTTGGCGG 59 25863804 25863826 CGCTTGAAGTATATTCCTTGTCC 59 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301745,FBtr0301746 1 2 2 80 3R 25662916 25662936 GAAGACGGCAACTAGATTGTG 59 25662975 25663051 ATTGTAACAATCCAAAGTGGCC 59 NA Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085434 2 1 2 76 3R 25318460 25318979 TATATCTGATACTCCTGCGAGC 59 25318405 25318423 GTAGAGTAGGGACAGGGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302516 3 1 3 91 3R 24852720 24852801 TCATAGAGTATCTGCGAAATGG 57 24852650 24852671 GCCAGTTTGTTATTATCCAGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14262 FBgn0039503 FBtr0085177 1 1 1 70 3R 23090474 23090492 TTCCGGCATAACATCATCG 58 23090369 23090387 ATCAATGATGCGCCTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106 2 1 2 112 3R 22940112 22940132 GATAAGCGTCGTTATCAAGGA 58 22940206 22940281 AGATCCTCTTGCATTCCCA 58 NA Drosophila melanogaster 61 T48 FBgn0004359 FBtr0085065 3 1 1 252 3R 22709886 22709904 TCAGTGGAGGCTTCAAGTC 59 22735372 22735390 ATCAGTGGCCCAGAATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mst57Da FBgn0011668 FBtr0084914 3 1 1 89 3R 21657585 21657604 GCCGATATGAAGTTCCTAGC 58 21657515 21657536 GTTGTGATTTGTATTCTGGCTC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084701,FBtr0084702 1 2 2 96 3R 20665204 20665345 CAGTGGAGCTAATCTTCAGG 57 20665404 20665422 GAAATGCTTTCGCATGTGG 58 NA Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 3 2 2 70 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006059 20006077 CAGAAAGTATTGCTGGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 2 1 1 60 3R 19228918 19228938 ATCAGCTACTTAAGGTCGTGG 59 19228957 19229528 CTGTAGACAATCAAAGACTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 2 2 2 103 3R 18981604 18981622 CCCGGAGATCTACAAGTCG 59 18980678 18981537 CCATTGAGCAAGGTTCCAC 59 NA Drosophila melanogaster 61 Sep2 FBgn0014029 FBtr0083945 2 1 1 115 3R 16413170 16413854 TGTGTATAGGCGAAACCGG 59 16413073 16413091 GTGTGCCTTCAACTTGACG 59 NA Drosophila melanogaster 61 CG4462 FBgn0038752 FBtr0083850 2 1 1 85 3R 15748906 15748995 AGCCATATTTGCCGATATCAC 58 15748841 15748860 GAATCACACCAATGGACCAG 59 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 2 3 6 87 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079435 14079453 CAAATACGACTGCGGAACC 59 NA Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083326 2 1 2 83 3R 12172995 12173106 CATCTTCGACGAGTCCTCC 59 12172930 12172949 GAATCCCTACCCTGGTACAC 59 NA Drosophila melanogaster 61 CG6276 FBgn0038316 FBtr0083123 2 1 1 165 3R 11145685 11145703 CGAACGCTGGATAAGTCAG 58 11145477 11145557 AGTTTAAAGACCTCCTCCGT 58 NA InUTR Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052,FBtr0301845 2 2 2 125 3R 11052134 11052152 GACTACACGAAGCATCCCA 59 11052240 11052369 CAGCAAATAGCCATTGAGGT 58 NA Drosophila melanogaster 61 CG17360 FBgn0037949 FBtr0082531 1 1 1 80 3R 7608082 7608163 CAGTAGCTTAATGGGTTCCAC 58 7608022 7608041 GTAGGCGTAGAGCTTAACGA 59 NA Drosophila melanogaster 61 CG14712 FBgn0037924 FBtr0082418 3 1 1 80 3R 7454727 7454811 CGTCGCTGTTAAACAATCG 57 7454855 7454873 CATTGAGCGAGGTATTCGA 57 NA Drosophila melanogaster 61 CG18577 FBgn0037870 FBtr0082341 3 1 1 78 3R 7022049 7022067 GAAAGGCTATCGGAGTTGC 58 7022493 7022511 GGAGATGTTGATGGGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32939 FBgn0052939 FBtr0082085 3 1 1 87 3R 5519221 5519297 AGTTGATGAGGACCAAACCA 59 5519347 5519365 TAGCTAGCTTCCTTCGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207,FBtr0082064,FBtr0082065 1 4 4 80 3R 5347893 5347914 CATGTCTGTTGATAAACTCCTG 57 5347955 5348032 TCCAGTTCAGGCATTTCTG 57 NA Drosophila melanogaster 61 CG18473 FBgn0037683 FBtr0082025 3 1 1 86 3R 5190247 5190324 ACATCGATTGACCTCCTATGG 59 5190372 5190390 AAAGTTACTCCGCGATCGA 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 2 2 2 83 3R 5121254 5121409 AGAAATTTGGGAGACACAAACG 59 5121192 5121210 AACAGGATGACGGAGTAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7800 FBgn0037552 FBtr0081795 3 1 1 60 3R 4044576 4044596 AAAGCTCTGTTATCGAACTGG 58 4044618 4044636 TTGGGAATATCGGTAGCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2678 FBgn0014931 FBtr0081757 1 1 1 80 3R 3740989 3741647 CTAAAGCCGAAACCGATATGC 59 3741689 3741707 GTGAGTAAGCATATGCCGC 59 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741,FBtr0081743 3 4 4 88 3R 3588209 3588228 GCAGTTTGATCAACAATCGT 57 3588279 3588366 AACGGTAGTTAGGTGACCT 57 NA Drosophila melanogaster 61 CG10919 FBgn0037514 FBtr0081739 1 1 1 81 3R 3584231 3584249 AACCGTATTCGATGACGAC 57 3584293 3584364 CAGACAACGTATCTGAAGGG 58 NA Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081616 3 1 2 216 3R 2943392 2943412 AGGATATTTCTCTTGCGAACC 58 2941384 2941402 TGGAATACATAGCCGCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1138 FBgn0037456 FBtr0081703 1 1 1 60 3R 2423041 2423061 CAACGGTTTAGGTTCTTGGAC 59 2423001 2423025 CTATAAATTCATAGAACTCCCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2104 FBgn0037365 FBtr0078726 2 1 1 60 3R 1518349 1518367 ACCTATTCCGTGAACTCGT 58 1518307 1518328 CAAACTGAAACTTATCCAGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab23 FBgn0037364 FBtr0078727 2 1 1 115 3R 1507629 1508354 CCATTAAAGTGGTCATTGTTGG 58 1507535 1507554 TAGGAAGTCCACTCCAATCG 59 NA Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 3 2 2 108 3R 1046185 1046269 ACCTTAAGAACGTAACCGCT 59 1046340 1046358 TCACCGAGCTTATACGCTG 59 NA Drosophila melanogaster 61 CG9791 FBgn0037232 FBtr0273009 2 1 1 80 3R 139441 139460 CAAGACGATATTGGACCTGG 58 139502 139575 ATGAACCGATAGCTTAGCCA 59 NA Drosophila melanogaster 61 CG11226 FBgn0037195 FBtr0078546 3 1 1 60 3L 22830521 22830541 CGACTACGTCTATGAGGTCAG 59 22830561 22830581 GTCCAGAAGAATTTCTCCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33289 FBgn0053289 FBtr0078367 2 1 1 80 3L 21528187 21528208 GCAATACATGGATACTCAGCAC 59 21528248 21528457 CGAATGTAGGGCGATTTCTC 58 NA Drosophila melanogaster 61 CG5656 FBgn0037083 FBtr0078396 3 1 1 87 3L 21436826 21436949 CTGTCCAAGACTTATTGCGT 58 21436758 21436776 GATAGTTCGCCTTGATCCC 57 NA Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456 3 1 2 83 3L 21190338 21190415 AACACATGATCTCCCACCA 58 21190461 21190480 TAACTTTGGGCCAGTTTAGG 57 NA Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 1 2 2 81 3L 19989870 19989957 AGAGTTCACAGACGCTGAG 59 19989998 19990020 CTCTTCTACTGATAAATGCCCAC 59 NA Drosophila melanogaster 61 CG18811 FBgn0042134 FBtr0075098 3 1 1 123 3L 18664681 18664699 CCAAATACGATGCTGTCCT 57 18664521 18664594 TTTGCCAGGTTATCCTTGC 58 NA Drosophila melanogaster 61 TORC FBgn0036746 FBtr0075196 2 1 1 60 3L 17657617 17657635 ATGAAGGAGGTGTATGCCA 58 17657575 17657595 CGTCTAGGATCTTCTGATTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7707 FBgn0036703 FBtr0075212 2 1 1 95 3L 17237061 17237079 AATGAGCGAACGTTCAACG 59 17237137 17237218 TCGAAATTGTCGCAATAGGC 59 NA Drosophila melanogaster 61 CG15715 FBgn0036538 FBtr0075536 2 1 1 61 3L 15829339 15829888 GTTTGCAAGTCGCAAATGC 59 15829296 15829315 GGATGCTTGTTCTCGAAGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333 2 1 4 166 3L 15487684 15487704 ATGGGTACTGCAGTATATGCC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 CG13737 FBgn0036382 FBtr0075754 2 1 2 88 3L 13872157 13872175 TTAACACCGATTTGTGCGG 59 13875769 13875788 GCAACTGTTTGATCTCCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075810,FBtr0075811 2 2 2 135 3L 13494307 13494395 CTCTACAGATATGGCGATGTG 58 13494492 13494510 CTTAGGTGTACCACTTGGC 57 NA Drosophila melanogaster 61 CG12520 FBgn0036324 FBtr0113169 2 1 1 108 3L 12895124 12895227 ATTCGTGCTAGAGACGACAG 59 12895035 12895053 AACATTTCACCAGAGCTGC 58 NA Drosophila melanogaster 61 CG10654 FBgn0036294 FBtr0075971 2 1 1 80 3L 12499575 12500335 AGGAGATTGAGGAAGTCTACG 58 12499515 12499536 TGCTAGAAATGGATAGCTTCTC 57 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 1 2 2 63 3L 12193845 12193863 CAAGCAGAACACCAATGCA 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 thoc6 FBgn0036263 FBtr0076019 1 1 1 109 3L 12185673 12185693 GCAAGATTGAGATGTATGGGA 57 12185515 12185602 CTCGGTTTCCCTTTATGCC 58 NA InUTR Drosophila melanogaster 61 byn FBgn0011723 FBtr0076039 3 1 1 80 3L 11924614 11925110 CATGGCTAAAGTCTGACATGAC 59 11925151 11925169 CCGAAACATTGCCACTGAG 59 NA Drosophila melanogaster 61 CG34050 FBgn0054050 FBtr0100105 3 1 1 214 3L 10937712 10937730 TTCATGCATCACTCCAACG 58 10937908 10937983 CTTGACTTGCAGCTACCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300239,FBtr0300238,FBtr0300237 3 3 3 60 3L 9966061 9966082 ATTAGCCTCTGTTAGTATCGTC 57 9966195 9966213 CTTCCAGATGAGGAACCAG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607,FBtr0301858,FBtr0299606 1 3 3 80 3L 9741277 9741295 GAGGAGGACATGTCCTTGG 59 9741158 9741235 CGTCATTGAAGAGATTGTGCT 59 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 3 4 4 81 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089495 1 1 3 124 3L 9361003 9361024 CCAATGATAAACAAACAGACGG 58 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527,FBtr0076525 2 4 5 97 3L 9067914 9068167 GATCCTGCTAGTGGATCGAC 59 9068227 9068245 TCCCTGTTGCTGATAAGCC 59 NA Drosophila melanogaster 61 CG6372 FBgn0035915 FBtr0076638 3 1 1 85 3L 8611590 8611667 AGATTGCCTGTCAATATCCGA 59 8611714 8611732 TTGACCATGTCACCTGGTC 59 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205,FBtr0110885 2 2 2 107 3L 7726863 7726885 GGGTACAGTTCAATATGTTCCTC 59 7726717 7726796 TGAGTTGAATGCCCTCCTC 59 NA Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 1 2 2 83 3L 7352943 7353032 AATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 Neos FBgn0024542 FBtr0076835 1 1 1 80 3L 7235384 7235467 ATCGCGAGAATACCAAATACG 58 7235508 7235527 TGGGAAAGAGTACATCCACG 59 NA Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 1 2 2 80 3L 5773226 5773496 ATAGAAAGCACGAGTAAGGTG 57 5773538 5773556 CTCGAATCTTTCATGGGCA 57 NA Nonspecific Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 2 2 2 95 3L 4538173 4538264 TATGTGAAATATCCCAAGGTGG 58 4538320 4538338 GAACTTGATGCTCAGTCCG 58 NA Drosophila melanogaster 61 CG14965 FBgn0035414 FBtr0073109 2 1 1 60 3L 3192050 3192070 CCTAAAGATTTCGAGTGTCCT 57 3192010 3192031 CAACATCCAAATTCTGTGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1887 FBgn0035290 FBtr0273261 1 1 1 92 3L 1894385 1894404 ATCTTAAAGTGACACGTGCC 58 1894254 1894330 CAGAGATGCCCTCTTCCAG 59 NA Drosophila melanogaster 61 HBS1 FBgn0042712 FBtr0072866 3 1 1 60 3L 1864281 1864301 CACATGATTGTCATTGGTCAC 57 1864241 1864259 ACAGTAGATGGCCCATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oseg4 FBgn0035264 FBtr0072797 2 1 1 88 3L 1733799 1733868 CGTGGATTCCAAGTACACG 58 1733729 1733748 TTAGAATCTCCTCCTGGGAC 58 NA Drosophila melanogaster 61 Lcp1Psi FBgn0011812 FBtr0088762 3 1 1 84 2R 4320870 4320888 TCATGCTCGTGAGTAACGG 59 4320761 4320779 CTTTCGAAACGTCCTACGG 58 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33390 FBgn0053390 FBtr0086382 1 1 1 60 2R 15640056 15640074 ATACATCGGTTCTCGTCCG 59 15640014 15640032 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33395 FBgn0053395 FBtr0086387 1 1 1 60 2R 15638219 15638237 ATACATCGGTTCTCGTCCG 59 15638177 15638195 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30430 FBgn0050430 FBtr0072448 3 1 1 132 2R 21016979 21016997 TTTAGTCTTACCCTGGCCT 57 21017149 21017167 AGTAGCAAGTTCCACAGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2811 FBgn0035082 FBtr0072412 3 1 1 81 2R 20827641 20827662 GACATACTAGAAGACTACCCGG 59 20827523 20827602 AGCACTGAATGGTTTCATTCTG 59 NA Drosophila melanogaster 61 CG12849 FBgn0035068 FBtr0072376 2 1 1 88 2R 20685701 20685768 AACTGCGAGACCAGATTCC 59 20685820 20685838 ATGAACTTGCAGGAGTCCA 59 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072435,FBtr0072434 2 3 3 83 2R 20662329 20662444 CCTACTACAAACTGATTGACCC 58 20662267 20662285 TAAGGCCCGACTTCTTGAG 59 NA Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295 2 1 2 116 2R 20361917 20361991 CAGTAATCCTCGACATGTATATGG 58 20362066 20362084 TCATGTGGTACTTGTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192,FBtr0072191 3 2 2 60 2R 19920060 19920078 ACGCAAGACTGATCTTGGA 59 19920018 19920036 ATGTGCCATGACTTGATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nap1 FBgn0015268 FBtr0072219 1 1 1 80 2R 19794235 19794738 AACCGAAGTGAGATCAGCA 59 19794173 19794191 GATTTCGTTGCAGGACTCG 59 NA InUTR Drosophila melanogaster 61 CG3520 FBgn0034859 FBtr0072027 1 1 1 80 2R 19284605 19284680 TCAGGAGGCTAAGATATACGA 57 19284545 19284563 CTGAAGACATCGGCATAGG 57 NA Drosophila melanogaster 61 CG30278 FBgn0050278 FBtr0071780 2 1 1 80 2R 18105489 18105559 TGCATCTGAATGAGTGGAC 57 18105427 18105447 CTATGGTGTTATTGTCCAGGA 57 NA Drosophila melanogaster 61 Cht12 FBgn0050293 FBtr0071544 2 1 1 81 2R 16952080 16952099 TCTGGAATAGGTGTGGATGG 58 16951967 16952036 TGCTCAGCTTGTCCTTCTC 59 NA Drosophila melanogaster 61 CG3295 FBgn0034573 FBtr0071547 1 1 1 60 2R 16903783 16903803 CGAACTGTCGTTCATATTCCT 58 16903743 16903761 GGAGTTCTTGCTAATGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 3 3 3 80 2R 16217662 16217743 ACCTGAAGGACTATATCAAGTG 57 16217782 16217802 AGTACTCATAGTAGCGTTCCT 57 NA Drosophila melanogaster 61 plu FBgn0003114 FBtr0086306 1 1 1 118 2R 16150630 16150702 TCAAACAGTGCATGGTCTG 58 16150530 16150548 ATTAACGCAGACGATTGCT 58 NA Drosophila melanogaster 61 RpL11 FBgn0013325 FBtr0086533 3 1 1 80 2R 15330539 15330557 CATCAAGTACGATCCCTCC 57 15330601 15330833 TGGTTCACATTGTAGCCAG 57 NA Nonspecific Drosophila melanogaster 61 CG15098 FBgn0034398 FBtr0086629 1 1 1 82 2R 14721619 14721829 CAGGTACCGTTAAGGAACG 58 14721555 14721576 GGTGATAATTCCAAAGACAAGC 58 NA Drosophila melanogaster 61 Spn6 FBgn0028983 FBtr0086733 3 1 1 98 2R 14014788 14015373 GAGAAACTGAAGCAGCTGG 58 14015435 14015453 CACCTTGGACACAAAGACG 59 NA Nonspecific Drosophila melanogaster 61 CG17385 FBgn0033934 FBtr0087517 2 1 1 66 2R 10298882 10298900 TAGAATTCGACGAGACGGT 58 10298776 10298852 TTGCTTCTGAAGGTTCGGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG18568 FBgn0033888 FBtr0087608 1 1 1 60 2R 9859611 9859629 CTCAGCAGCTACTGGAGAC 59 9859569 9859590 AGCTTATGATCGAGGATCTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ser8 FBgn0019928 FBtr0087664 1 1 1 60 2R 9322047 9322066 GAGGCATACAACTCCAACAG 58 9322089 9322107 GCTTAGTCTTCAGACGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 3 2 2 95 2R 9241391 9241559 CAGTTCCACGATAACTGGC 58 9241314 9241332 TCACCAGTAAAGCAACAGC 58 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 1 2 2 95 2R 8828667 8828756 CAGTTGAGAAATCCGAGGGA 59 8828591 8828609 TGAGATTTAGGCCCTGCAG 59 NA Drosophila melanogaster 61 CG12374 FBgn0033774 FBtr0087854 1 1 1 80 2R 8649749 8649771 GTATCTATCAGCTGACCATTGAG 58 8649811 8649900 GGAAGTGCACAGAGATGTG 58 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860 3 1 3 61 2R 8648241 8648262 GAAATATCAGTGAATTAGCGCC 58 8647996 8648015 TCTTGATTTCGGTCAGTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8860 FBgn0033691 FBtr0088011 3 1 1 163 2R 8067274 8067292 AAGGTTGTCAAATTCGCCG 59 8067129 8067147 ATCAGCTTGACGAAGAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 etaTry FBgn0011554 FBtr0088163 1 1 1 60 2R 7228432 7228452 GGGTTATACCAAAGAGAACGG 58 7228392 7228412 AATTGGTACCTTAACCTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34221 FBgn0085250 FBtr0299834 2 1 1 187 2R 6085573 6085886 CAAGCTGAAGATCCGAATACAC 59 6085407 6085425 AATCGTCATCCTGGTCGTC 59 NA Drosophila melanogaster 61 egr FBgn0033483 FBtr0088405,FBtr0088406 2 2 2 81 2R 5970986 5971085 CAAGGAAGTATGGGCTACCA 59 5971129 5971147 GCGTTTGAAAGTGTCCCTG 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 2 3 3 81 2R 5323910 5323929 TTCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 CG2063 FBgn0033400 FBtr0088600 1 1 1 81 2R 5173843 5173927 CGTCCCTGGTAATCATACC 57 5173780 5173798 TTCTCCTTAGATCGCTTGC 57 NA Drosophila melanogaster 61 CG30374 FBgn0050374 FBtr0088810 2 1 1 60 2R 4045255 4045277 CTATACCTGGAGTCTACATTTGC 58 4045217 4045235 GAAGAGGTAAGCAGATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871,FBtr0113053,FBtr0088872 2 4 4 80 2R 3864216 3864298 TACCGAGGATATACATCTCCG 58 3864156 3864175 ATGCGATCTTGAACATAGCT 57 NA Drosophila melanogaster 61 mus205 FBgn0002891 FBtr0088831 1 1 1 80 2R 3687576 3687658 CTCACGCGTAAATGGATGC 59 3687700 3687720 GCCGTTGACTATTATGAAGGG 58 NA Drosophila melanogaster 61 U2A FBgn0033210 FBtr0088941 2 1 1 60 2R 3563632 3563652 AGATTCCACAAATCGAGAACC 58 3563592 3563614 GACAAGTCGATGGTATCAAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 2 2 2 88 2R 2699511 2699529 CCATGAGAACTGTGAGCAC 58 2699578 2700296 CTATTATCGTTTGCACATTGGG 58 NA Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485,FBtr0081486 1 2 2 62 2L 21233482 21233635 GAAACTCTTCGTCTTCGCT 57 21233438 21233456 TTAAGGTGGGAAACATCGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG10730 FBgn0032843 FBtr0081346 3 1 1 81 2L 20071696 20071835 CAATGCCTATAATCAGCTAAGAAGG 59 20071639 20071658 ACTGGTGATCATGTAGTCGG 59 NA Drosophila melanogaster 61 bwa FBgn0045064 FBtr0081331 1 1 1 88 2L 20069443 20069464 CATTGTTAACGCCTTTGTTCTC 58 20069512 20072370 CCCTCTGGTCACTAACTCTC 59 NA Drosophila melanogaster 61 CG10659 FBgn0032839 FBtr0081350 2 1 1 60 2L 20025329 20025347 CAAAGGACTGGGATCACGA 59 20025287 20025306 AAATCCTTTAGCTCGACCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab9 FBgn0032782 FBtr0081206 1 1 1 80 2L 19434794 19434814 GCAATGAGTTCCTCAACTACG 59 19434853 19434935 CCGGAATGTCGTTCTTATTTCC 59 NA Drosophila melanogaster 61 CG17321 FBgn0032719 FBtr0081110 1 1 1 80 2L 18853443 18853545 GCATACTATTGGTGTTATCCTCG 59 18853585 18853603 GTAGAAAGAGGCCCACCTG 59 NA Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 1 2 2 80 2L 17158737 17161865 GAGTCAACATCGATCTGCG 58 17161908 17161927 GATAAAGTCCGGAACTCTGG 57 NA Drosophila melanogaster 61 CG31780 FBgn0051780 FBtr0080758 1 1 1 80 2L 15696256 15696509 CCCAAGAACCTAATAATCAAGGAG 59 15696548 15696566 CGAGTTGACAAATCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 CG42682 FBgn0261568 FBtr0302804 3 1 1 84 2L 14842377 14842398 GATTGATGACATGTTCCTAGTG 57 14842442 14842543 TTTGCACAAGCTAGTATCGA 57 NA Drosophila melanogaster 61 CG4500 FBgn0028519 FBtr0080591 2 1 1 64 2L 14028075 14028093 TGAACACCAAACAACGCTG 60 14028282 14028301 GCCAATATTTAGCGTTGCCA 60 NA DesignNoJunction Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 2 3 3 84 2L 13897288 13897306 CAAGAGATGTGCGAACTCC 58 13897353 13897436 TTTGCGCCATTCCATATGAG 59 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996,FBtr0080535,FBtr0110941 3 3 3 94 2L 13784582 13784793 ATTATACCAGAGCGACTTCGG 59 13784849 13784867 AAGTCAATTGCGAAGCAGC 59 NA Drosophila melanogaster 61 CG9377 FBgn0032507 FBtr0080474 2 1 1 81 2L 13360784 13361276 CCCGATAAACTCCCGACTC 59 13360721 13360741 GGTAGTACCAGAGATCATGGC 59 NA Drosophila melanogaster 61 CG31730 FBgn0051730 FBtr0080480 2 1 1 60 2L 13259303 13259324 AGGAGCTTCCTATGTTAACCTC 59 13259264 13259283 GTACAATTGATAGGCAGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 3 2 2 84 2L 12131338 12131357 CGCCTACTGACCTATATGCT 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 2 1 1 61 2L 11936908 11937110 AAATAGTGGAATTACTGCGCAG 59 11937130 11937150 ACTTGAAATAAACTGGCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6614 FBgn0032369 FBtr0080267 1 1 1 80 2L 11645651 11645669 AATATCTGTTTGCCTGCCA 57 11645534 11645609 AAGACGATTGAGATGGTACAG 57 NA Drosophila melanogaster 61 kek2 FBgn0015400 FBtr0080252 2 1 1 60 2L 11622181 11622200 GTTTCAGGACTACAGCTCTC 57 11622219 11622241 TAACTCCCTGATAGGATTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14070 FBgn0032313 FBtr0080177 1 1 1 95 2L 10901261 10901279 GATAGACGAGGGCTTGGAG 59 10901128 10901147 AGATAGGCAAACAGTTTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 10 10 80 2L 10825996 10826016 AGGAAATCCGATCTGATCCTC 59 10825824 10825958 GGTAGATGATGTACGCTTTATCG 59 NA Drosophila melanogaster 61 CG17108 FBgn0032285 FBtr0080127 3 1 1 65 2L 10693484 10693502 GGATTTGGTGGAGGAATCG 58 10693437 10693456 TCCACCAATAACTCCAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34181 FBgn0085210 FBtr0112374 1 1 1 60 2L 9368143 9368166 CTGCAATCTAAGAACTACAATGGG 60 9368184 9368203 CATTTGGATATAGCAGCGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 3 3 3 81 2L 8928732 8928996 TAAAGCGAGCAGATCTTCC 57 8929040 8929059 GGAGTTGCCTTAGGTTTCTC 58 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 2 4 4 80 2L 8173530 8173610 ATTGATCTACAGCCATTTGCC 59 8173652 8173670 GAGATACGAACCCAGGGAG 59 NA Drosophila melanogaster 61 Uro FBgn0003961 FBtr0079486 2 1 1 81 2L 7780673 7780764 GTGGTTATAAGGAGAACAGATCC 59 7780805 7780823 AGGATTGGGTCGTCTTCAG 59 NA Drosophila melanogaster 61 CG14538 FBgn0031943 FBtr0079484 1 1 1 60 2L 7756871 7756890 GCAGCTAGATCCTGAGTACG 59 7756913 7756931 CTTGCACTTGACTAGGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rca1 FBgn0017551 FBtr0079342 3 1 1 60 2L 6853396 6853414 GTCCCTGGATCTTGACGAG 59 6853438 6853456 TTCGGCGAAGTTATATGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11329 FBgn0031848 FBtr0079319 3 1 1 60 2L 6677100 6677119 CAGAAGTGGATCCAAATGGG 58 6677059 6677080 GTGGACCTAGGTAGATTCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cort FBgn0000351 FBtr0079320 2 1 1 80 2L 6675693 6675771 GAAACTATCCAGTTCTGGACC 58 6675633 6675651 ACTTGAAGAACAGCTTGCG 59 NA Drosophila melanogaster 61 CG13766 FBgn0031834 FBtr0079330 1 1 1 60 2L 6566001 6566019 GCTCCTCTGCCTAATTGTG 58 6565959 6565978 GGAATCAGATACGGAAACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12511 FBgn0031729 FBtr0079113 3 1 1 61 2L 5678958 5678977 GCTCAAGACATTCTCACAGC 59 5679000 5679019 TTTCTCTGACCTCTAGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079111 3 1 3 110 2L 5662967 5668823 AGAGACCAACTAAAGCTCTCC 59 5668956 5668974 TTGGTGTAACGGAACATGC 59 NA InUTR Drosophila melanogaster 61 CG14014 FBgn0031718 FBtr0114511 3 1 1 60 2L 5550597 5550617 ATCACTACGTGCTCAATAACC 58 5550557 5550575 TTGAGGAAGCTCCTCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079011 2 1 2 205 2L 5055663 5055730 CGAGGACACCAATCTCTGG 59 5055898 5055917 AGACCTAAGTACTAAGCGGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290079,FBtr0290082 1 9 9 80 2L 3874501 3874519 TCCAAGACGACAATCTCAC 57 3874385 3874457 CTTGCGCATGGTATTTGTG 58 NA Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 1 2 2 92 2L 3807049 3807143 GGAAACTAGTGTTGCTGGC 59 3807199 3807217 TGGTCGTACATGAGATGGG 58 NA Drosophila melanogaster 61 NLaz FBgn0053126 FBtr0077942 1 1 1 105 2L 1361573 1361653 ATCATCACTCGAGTTCGCA 59 1361486 1361504 TTAACATCTGGGCACTTGC 58 NA Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 3 2 2 80 2L 1014709 1014790 ATCACATCTATGAGGTTCACCT 58 1014650 1014671 GGTTCTTCAGGTAGAAAGAACG 59 NA Drosophila melanogaster 61 Pph13 FBgn0023489 FBtr0078070 3 1 1 84 2L 578021 578160 AGCGGAGATACAGAACCAC 59 578208 578226 AACACGTCCGGATAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085 2 1 2 110 2L 462385 462403 ATGGTTCCGAGAGTGATCC 58 462038 462057 GGATGGATCGGAGTTCTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 ex FBgn0004583 FBtr0078059 1 1 1 80 2L 446514 446533 CCACCACCGTATGTAAACAG 58 446574 446652 CTTAGAGGGTATTGGAGGTGG 59 NA Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 3 2 2 84 2L 253375 253459 CTCTTCCATCACATCATGAATATCC 59 253315 253333 CTTGGAATTGCACGAGCTG 59 NA Drosophila melanogaster 61 Nhe1 FBgn0026787 FBtr0301452 3 1 1 96 2L 105445 105521 CACTTAAGCGGTATTATGGCT 58 105315 105333 GCTGCATGGTAATTTGGGT 58 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 3 6 6 81 2L 11515 11793 CAGAGGAAACCATTGGTCG 58 11452 11473 GGAATTTCACTCATGTTTACGG 58 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0078101 3 1 3 82 2L 72924 72943 TTTCCTTCGGATTGCATCAG 58 74913 74931 ACAGCATCTGCATATTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 3 3 3 61 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 2 2 2 85 2L 1052490 1052584 CAATACCTATCCCAAAGAGATTACC 59 1052429 1052447 AGTTGAACCACGAGGTCTC 59 NA Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 3 2 2 98 2L 1152248 1152266 TATCTGTCCAAGGACTCGC 58 1152107 1152186 CAACTCGGTATAATCGCCG 58 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 3 3 3 90 2L 2229501 2229520 TCGATGAGGCACTTAAACAC 58 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 2 4 4 80 2L 2495480 2495582 TTCGCAATGAGGTTCAAATCC 59 2495624 2495642 AGCACATGACCTGGTACTG 59 NA Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 3 1 1 230 2L 2768069 2768087 AGTTCGGACTGCATTAGTG 57 2767738 2767759 CGCTGTTGTGGTAAATAATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608 1 1 2 155 2L 3277970 3280316 TACTTTCAGTAACCTGCAGGG 59 3277835 3277853 GTGCGTCGGTTCTTATCCT 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 2 6 10 163 2L 3500137 3500155 CACTACGATGCTGTACCAG 57 3499755 3500010 TGAGGTTGAGTTTGTCCAG 57 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 3 11 11 80 2L 3626042 3626061 TTTCAGACCATCATGATGCG 58 3624661 3625999 TTTGAAGATGGGCACACTC 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 3 5 6 83 2L 4192685 4192706 GGAACCTTAAAGACAACAACCA 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0077434 3 1 2 84 2L 4401681 4401871 ATTTACCCGCAAGGAATCG 58 4401918 4401937 TGTGATCATGATTGTGTCCC 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 4 5 111 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 2 11 11 97 2L 4994704 4994794 CCCTTTAAGGATTACCTGGAG 57 4994627 4994648 GAGATGAAGCCATTGATATGTG 57 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0079035 1 1 6 114 2L 5042876 5043085 ATGTATAGCAGGCGAAAGGT 59 5042781 5042799 GAGTTCTCGAGTGGATGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0300471 2 1 5 80 2L 5185895 5185913 GACAACTAGCAACACAACG 57 5185955 5187617 GTAATTAGATCCTTCTGGCGT 57 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 2 2 2 87 2L 5323403 5323421 AGATGCGATTCATGCAACC 59 5323217 5323352 TTGTTGAAGCAATCAGGCG 59 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 1 3 3 80 2L 5533672 5533691 CTGATGACTCAACCAAGAGC 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 2 3 3 106 2L 5946241 5946324 TCACCTGAAGATCCCATGC 59 5946393 5946412 CATACTTCTTGTCCGTGCAG 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 1 5 5 80 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961817 6961899 CGTTCATCAACCACATGCT 58 NA Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 2 2 2 90 2L 7196231 7196326 CGACAAGATCACAAGGTGG 58 7196159 7196177 ATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079458 3 1 5 119 2L 7455749 7461586 TTCACAAGGTGTTGAAGAACC 59 7455650 7455671 TGGTTACAATGGTGTACATGGA 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 2 4 4 80 2L 7649009 7649029 GTTGAGGACTTAGTCCTTTGC 59 7648881 7648972 CTTAATTGTACTGAAACAGGGACC 59 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 2 2 2 135 2L 7800619 7800638 ACTATTGGAGATAGAGGCCC 58 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0079641 2 1 2 87 2L 8140774 8159232 CATCTTGAATCGCGAACCG 59 8140705 8140724 CAAGTTAATCTCGTCGAGCG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 1 2 9 103 2L 8227138 8227677 CTTTATTGCAACCGGATTGGA 59 8227055 8227073 TAACAGTGAGGACCTCGTC 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 2 2 9 103 2L 8227139 8227677 CTTTATTGCAACCGGATTGG 57 8227055 8227073 TAACAGTGAGGACCTCGTC 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273381 3 1 4 84 2L 8244491 8244978 CCGGAGAAGGTAAACCTCTC 59 8244426 8244444 TCTTCTCGTTTAGGCGACC 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 2 6 6 80 2L 8261677 8261754 GCTGCATACCAAAGTTCCAC 59 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 3 3 4 134 2L 10248626 10248644 ATGGACGCTAATCTCTGCC 59 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 4 7 80 2L 10257441 10257462 CACATGTAAACAATCCTCTCCA 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300114 3 1 4 95 2L 11163927 11165571 CACACCTGATTCCATGGGA 59 11163850 11163872 GTCTCCTGTTTCTTGAAGAATGG 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262 3 1 4 137 2L 11797737 11798680 AACTTCATCTGCAAAGTTCCC 59 11797620 11797638 GAGCGTAGAGGTAACCAGG 59 NA Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080302,FBtr0080301 3 2 2 87 2L 12060457 12060475 TATCTCCCACGATGAGGCT 59 12060329 12060409 GAGAGGCTTACTTAGTATGGCT 59 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080360 1 1 2 99 2L 12133160 12133178 GACACGAACCATTGACGTG 59 12131421 12133099 CCAGTGCAAAGATATCTGCAC 59 NA Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0080338,FBtr0301019 3 2 2 81 2L 12166982 12167005 GTTGGTTATGTTGATCTACTTGGG 59 12167040 12167133 CAACTGACTCTGATCTAAGATCAC 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 1 2 17 102 2L 12728786 12737964 GCAATTGTTTGCGGTTCTG 58 12738030 12738048 CTGGGCGAAGTAGTACAGG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0113040 2 1 9 195 2L 13275050 13275594 GAATCGTCTCAGCGATCCA 59 13275753 13275771 ACTATTCCTTGCCTGCTGG 59 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 1 5 5 80 2L 13634172 13634251 ACCTACAGAGATTTCACTGGC 59 13634293 13634311 CTCGCAAATTCCACCAGAG 58 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 2 2 2 80 2L 13985570 13985645 CGCAAATGCATAATCTCAGC 58 13985509 13985530 GCTCTTCGTTGAAGTTAATAGC 57 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 3 5 5 80 2L 14189225 14195743 GAGCTAATGAGCTTGAACCT 57 14189164 14189182 GAAGCGTCGTATGAGACTC 57 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 3 4 4 83 2L 15065452 15066951 GTTCCGATAGAACTGGTGTG 58 15065388 15065406 CAATAGCCTCCTTGACCGA 59 NA Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 3 1 1 85 2L 15616153 15616172 CTATAGATGGCCCAATCGCA 59 15616034 15616052 GAATAGCGCTCACGATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 3 2 2 151 2L 15895694 15895768 GAGTCATACTTTGTCGAAGAGG 58 15895878 15895898 ATCTTGTAGTCGATCAGATGC 57 NA InUTR Drosophila melanogaster 61 BicC FBgn0000182 FBtr0080805,FBtr0080804,FBtr0080803 3 3 3 84 2L 16045892 16045910 GGATCCGAGAAGGAATCGG 59 16045957 16046036 GGATTTGGCTCGCAATACTC 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003 2 1 4 103 2L 16185533 16185551 AGAGCATATCCATGCGACC 59 16185614 16189034 GGTGCGTAGATCATAGTTAATGG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 1 7 7 110 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 2 2 2 175 2L 16744377 16744699 AGCGTACAGTAATGCTACC 57 16744836 16744856 GTGGATGCATAATCTTTGTGG 57 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 3 4 4 85 2L 16820585 16820603 TTCTGGACTGGTGAACTGG 59 16820646 16820728 GAATGCCATACTTTAGGAGATTCTC 59 NA Drosophila melanogaster 61 beat-IIIa FBgn0032627 FBtr0301673,FBtr0301674 2 2 2 80 2L 17158736 17161864 GGAGTCAACATCGATCTGC 58 17161906 17161926 ATAAAGTCCGGAACTCTGGAG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 3 4 5 107 2L 17439290 17441811 AATGGACTCAGATCCAGCG 59 17439201 17439220 TGGTCATTCTGCAATTGCTG 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 1 4 12 85 2L 17717899 17717918 CTTCAATCCCAACGATCTGG 58 17716680 17717851 GATAACAACCGTCAAGCGG 59 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0110886 2 1 2 88 2L 17810926 17815582 ACAATGAGTCGACGAATATTCG 59 17810859 17810877 GTAAATGACACCGGTGGTG 58 NA Drosophila melanogaster 61 CG5758 FBgn0032666 FBtr0081036,FBtr0081035,FBtr0081037 2 3 3 80 2L 18128001 18128022 AATCAGGTGTTCATTATCTCCG 58 18128061 18128145 CTTATCCTTGTGCATCTGGTG 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 2 4 4 108 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856751 18856771 ACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 3 4 4 109 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856750 18856771 AACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 1 2 2 124 2L 19047033 19047156 CTATTCCACTGAAGACGAGG 57 19047241 19047261 GTATTGCCCGATCCATATCAG 58 NA Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 3 2 2 107 2L 19056065 19056262 AGCACGATAGTGTCAACGA 59 19056331 19056351 CCTTGACTCGATGATTGTGTC 59 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 2 3 3 86 2L 19067506 19067579 AAGGACAAGTACGTCATGGA 58 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0081325 2 1 3 106 2L 19735628 19735779 AGAATTCTGAGCGCATGTG 58 19735540 19735558 ATAAATAGGCGCTCGTCCT 58 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0300966 2 2 3 80 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779319 19779406 CCGTTGTTGGTATGCACAG 59 NA Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 1 2 2 138 2L 20095816 20095834 ATCTGCAGGGTAGCAAGTG 59 20095936 20096017 TTGTCCTCGTTGTAACGCT 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081410 1 1 2 98 2L 20758656 20760537 AAACGAAGAATGTCTCGTCAC 59 20760597 20760615 GATGGTTCCTCCCTTGGAC 59 NA InUTR Drosophila melanogaster 61 tadr FBgn0032911 FBtr0081463 3 1 2 81 2L 21080467 21080485 CCTATTCAGTGGCTGTGCT 59 21080526 21080611 ACTAGGTATCAGCAGAATGAGTC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 1 7 7 80 2L 21120172 21120285 CTGCCATAGGCATCATCTG 58 21120328 21120347 AAATGGGTTCTATGACACGC 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 2 5 7 80 2L 21121223 21121590 CAGAGATCTTAAGGGAGCTGAG 59 21121628 21121649 CTCATAACTTCCATAGCATCGC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 2 3 7 141 2L 21125430 21126168 AAATCATCACCTGACTCGGA 58 21126271 21126290 TATCTGTGTCCGGATTGTCG 59 NA Drosophila melanogaster 61 CG9249 FBgn0032922 FBtr0301238 1 1 2 94 2L 21157776 21157794 ATGTTCTCAATCTGGTGCC 57 21157637 21157719 CTGACAGTTCATCGTATCCA 57 NA Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0110895 2 1 2 80 2L 21206668 21206687 ACTCACTTTCTTCTGATCGC 58 21206729 21206820 TGATGTGAAGATGCTACCCA 58 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602 3 1 3 149 2L 21278420 21281141 AGCTAATGAGGAATCCCAGC 59 21281253 21281271 GATTGACCCGTGTCTCCTC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0085925 2 1 2 83 2L 21578668 21578757 CGGCAAAGTTTACTATCAGAC 57 21578605 21578623 TCTGAGTATGGACTACGCT 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085901 3 1 4 89 2L 21719635 21725078 GAAGACGATTTGCTATGGCC 59 21725129 21725148 ATCAATGCCGAACTTAAGCG 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 2 2 6 193 2L 22737572 22741957 ATACGAGATTGAGACGGCAG 59 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 3 2 6 170 2R 1982572 2010405 GTGAATTCTATATCTTCAGGTCGC 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086137,FBtr0301423 3 2 7 106 2R 2625508 2625527 GGTCAATGCCAAGATATTGC 57 2622408 2625008 GCTGTTTGTCCATAACCCT 57 NA Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 3 2 2 74 2R 2771951 2772027 GACCTTAGAGAAGCTGGGC 59 2772065 2772083 GACTTATCGGCGAACAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084,FBtr0111051,FBtr0111085 1 3 59 80 2R 3219878 3228061 TGATTGTGAACGTACCTCCC 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0088996,FBtr0300481 1 3 8 80 2R 3355978 3355996 GTTAAGGAGTTCAGGCGGA 59 3355321 3355934 CAGCACATCAACTCCACAG 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 2 5 8 108 2R 3355322 3356623 ACTATGCCGTTGATGTGCT 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 1 2 6 143 2R 3517705 3517723 CTACATCTGCCTCATGGAG 57 3517830 3521735 TTATTGGCTAGTTTGCCCA 57 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581 2 1 4 89 2R 3738545 3739778 AAAGAGGGCTGACATTAAGCT 59 3738476 3738495 TAGCAGACGACATCCTTCAG 59 NA Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 1 2 2 96 2R 3860606 3860624 TCTGGAGGACAACGATTCG 59 3860681 3860761 ATATAGAACCTGCAACTCCTCG 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 2 2 3 101 2R 4505874 4505892 TGGTGCGAATTGTATTCGC 59 4505957 4506032 TATTGCGAACGTAACTGCG 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 2 2 4 83 2R 4758459 4758477 TCCTTTGGTAAACAGTGCG 58 4758521 4759738 GTTCAACGAGAAGCTAATTGTG 58 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088642 3 1 2 170 2R 4782933 4782952 GCGAACTTCGAGCTTAATCC 59 4783141 4783470 GTTATCTTGCGTATGGGTCAG 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 2 2 2 85 2R 5763388 5763409 AACGATTATAAGCTGGATCCCA 59 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 2 4 5 83 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949139 ATTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 3 3 3 107 2R 5982043 5982062 ATACCATCGAACCGGAATCC 59 5982132 5982211 GTCTCGAGTCTTCTGCCAG 59 NA Drosophila melanogaster 61 gem FBgn0050011 FBtr0300943,FBtr0089758,FBtr0089759 1 3 3 80 2R 6019888 6019908 CCAGAGCTACGAAATAAAGCT 58 6019949 6020268 ATCTTGATCACGCTCTTCAG 57 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444 1 1 4 190 2R 6038524 6038542 CTTCAAGCACAACACGTCC 59 6036937 6038373 GTACTACCTCCAGATTCTCCAC 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089347,FBtr0089357 1 2 26 180 2R 6419754 6419772 ATTTGACACTGGACGAGGA 58 6371745 6419549 TTCCTGCTCAAATCTTGGG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089355 2 1 26 87 2R 6389923 6389941 GAGTCCAGGATTCGAGTCC 59 6389556 6389873 TTAGTTTGTCTGAGGGCTCG 59 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569 3 1 3 157 2R 7115744 7115762 CAAGACGATGCCTACTGGT 59 7115329 7115623 TCAAAGTCGTCGTTCTGCT 59 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 2 2 2 173 2R 7300280 7300298 GATCCCTCCCTGAACTGTG 59 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA DesignRelaxed Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065,FBtr0088066 3 2 2 60 2R 7676129 7676150 GTTCTACTATTTCTTCAGGCCC 58 7676090 7676112 CACTATAATACCAGTTCCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 1 1 3 264 2R 8225480 8225498 GAGTGTCCAAAGAACGGAC 58 8226215 8226235 TAGTAGAAGCTCAGGATCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087959,FBtr0087957,FBtr0087960,FBtr0087958 2 4 4 102 2R 8229049 8229067 AGTGTTCCACCGATCACAG 59 8228907 8228926 ATGATTCCAAGACCTGGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 2 2 4 96 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464417 8464435 CAAGCAGCTTTGATCTCCG 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 1 6 8 80 2R 8506043 8506574 ACGTGTGCTACAGATACGG 59 8506616 8506636 TTCCTTAAGGTTCGATTGCAG 58 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507 1 1 2 80 2R 9029311 9029613 CCAGTTAGCAAACGAAAGGT 58 9029656 9029674 TGAAGGACTTCTCCTCAGC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 3 5 12 80 2R 9310223 9326125 TCTCCTGAATACCTATGACGAG 58 9310164 9310184 AGGTTTATGATACGCCTCTCC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 3 5 12 80 2R 9310223 9326125 TCTCCTGAATACCTATGACGAG 58 9310164 9310184 AGGTTTATGATACGCCTCTCC 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0301395 1 2 6 111 2R 9332017 9332035 ATCCCTAACAGCCTGTGAG 58 9331839 9331942 TATGGCCTCGTTGGATGAC 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0100656 1 1 6 80 2R 9331982 9332000 TGGCCATCAAGAATTCCGA 59 9330651 9331938 AAACCGGAAATGGGTTGGA 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795,FBtr0112796 1 2 8 80 2R 10064973 10065398 GGGACACCAATTCAAGTGC 59 10065442 10065460 CTTTAGGTTGGGTGCTTCG 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089618 3 1 7 166 2R 10490402 10490675 TGACGCACAAATTAACCCT 57 10490254 10490274 TGGGTTATAGAGAAATCGACG 57 NA InUTR Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 3 3 4 87 2R 10661509 10662488 TCAATTCCACGTCAAGGGT 59 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 1 3 6 80 2R 10849117 10849139 CAAGAATATCTCATACGAGGAGC 58 10848998 10849079 TTGATGGTAAATGGCTGATCC 58 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414 1 1 2 91 2R 10927474 10927492 CCGGCAGAACAAATCTCAG 58 10927547 10927631 TGATGGGCAGCTTGTAGAC 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 1 5 5 82 2R 12093319 12093420 TGAAGTGAAGAAGGCATATCG 58 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 3 2 5 117 2R 12216146 12216166 CCAACACATAGATCGTCTCCA 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 3 3 5 82 2R 12442915 12442934 CATCAGTCGCAGTTGTAGTC 58 12442979 12443118 TTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087100,FBtr0087099,FBtr0087098 1 3 3 80 2R 12454482 12455295 GTTCGAATTGGAGAAGATCCAG 59 12455335 12455354 AGAATCTTCCCGAACCATCC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 2 3 5 150 2R 12562743 12565925 AGGAAATCAGTACTGGATGCT 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 1 2 2 60 2R 12951490 12951511 CAGGGACCATACATTCTATTCG 58 12951773 12951791 CCTCCACAATGGTAGTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086924 2 1 3 196 2R 13359114 13359363 GCATCACAGCTATAGTCGG 57 13359523 13359541 CATAATCCGGCTCGTAGTC 57 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 3 5 5 182 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400435 13400455 GACTAAGGAACTCAGAGTGGG 59 NA Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 2 2 2 89 2R 13424077 13424211 TGATGAAGATCTGCTGGGC 59 13424261 13424282 TTTGGGATATTGTCCACTACCA 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299706 2 4 7 191 2R 13696981 13696999 ACGGATCAGAAGAGTTTGG 57 13697154 13708517 ATTGAGCTTTCCACTCTGC 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 3 5 5 108 2R 14043478 14043496 GATGTCGTCGGATCAACAG 58 14042988 14043409 GAGTGTTACATCTGTGAAGCTC 59 NA Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 3 2 2 86 2R 14058154 14058232 TGGAAATAAGGGTTGCCGT 59 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 1 2 2 80 2R 14074051 14074125 AAACAAATGGGCACCACTC 59 14073989 14074011 CATCAGCTCATAGTACTCAATGG 58 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 1 3 3 83 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 1 2 8 95 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312528 14313477 ACTCAACGCTTTAACGTTCTC 59 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360,FBtr0113361 3 3 3 81 2R 14319247 14319327 GCTGAAATATTTGGTGGCC 57 14319184 14319205 CAGATAATGATGTACGACATCG 57 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 2 2 2 80 2R 14745204 14745225 CAACATTGAAGGAACCTTATCG 57 14744896 14745164 GATCCTCAATAACCTCTGGC 57 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 1 5 12 80 2R 15062801 15063698 AGCAATTCACTTGGACCAC 58 15063739 15063760 CGAGGATTCTGAAATTGAGGAG 59 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 3 3 5 88 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212015 GTTGTTTAGGGAGCTAGCCA 59 NA Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 2 2 2 80 2R 16391212 16391293 TGGTCTCCATACAGAGTCTC 58 16391336 16391354 CCTGGCTGATGTTATTGCT 57 NA Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 3 2 2 81 2R 16391210 16391291 CGTGGTCTCCATACAGAGTC 59 16391334 16391353 CTGGCTGATGTTATTGCTGG 59 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 1 3 3 87 2R 16891592 16891668 GCGATCAGACCTTCAAGTG 58 16891719 16891737 TTTCCCTTCTTAGGCGGAG 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 2 4 15 149 2R 16908813 16910578 AGCAAACTGGTTGTTACGG 58 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 2 2 8 135 2R 17185985 17191401 CCAGCCAGAACATAAATCGC 59 17191496 17191517 CGATCATCGATGGTAAGATGTC 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 CG3074 FBgn0034709 FBtr0071785,FBtr0071784 3 2 2 87 2R 18079226 18079245 GACTTCCCAGGTCCTTACTG 59 18079064 18079177 ATAGAGTGTTGGAGATGGGC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071852 2 1 4 179 2R 18195754 18197445 AGTCCAAGTTGATCTGGCC 59 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 3 4 4 80 2R 18215620 18215706 GATAAATTCCTTCTGGAGAAACTGG 59 18215742 18215762 GTGGAAGATCATCTTCTCGGT 59 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 1 3 3 109 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631808 18631826 GACTACGTGGTCGTTCCTC 59 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573 3 1 3 82 2R 18664573 18664591 CACCATTTCTCCTATGGCG 58 18646892 18664530 CCAAACTTTGGTCCTAGATCTG 58 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 1 3 4 80 2R 18955643 18958139 GCTCCAAATAGTGCCATGG 59 18958182 18958201 GTACAGGGTCATGTTCTTGG 58 NA Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 2 2 2 61 2R 19246472 19246492 AGGAGGAGTTCTTCTACAAGC 59 19246575 19246593 CTCCGTCTTGGTCTTCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 2 2 2 128 2R 19272564 19272647 TAATCACCAGTCGCTTCGT 59 19272399 19272417 TATATGACTTGGGCACGCA 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072215 3 1 8 102 2R 19816907 19816928 TGCAGAAGAATGGATAACTGTG 58 19814694 19816844 GACATCAGGAACATCTGCG 58 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 3 3 3 80 2R 20398305 20398386 TATTCGTAAGGTGTTGGAATCC 58 20398246 20398264 AGCAGACTGATGAGTTCCT 58 NA Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 2 2 2 163 2R 20422601 20422674 ATCGATTCAGGACACCACC 59 20422456 20422475 TTAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089868 2 1 2 132 2R 20464512 20464532 GCGAATAACATGACGAAACCA 59 20464625 20464712 CAATGTTCTGCCCTCTTGTG 59 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 1 4 4 80 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 3 3 6 90 2R 20818308 20818326 CAACTTCAACGTGGCTCTG 59 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 1 2 3 81 3L 201053 201182 GAACCTAAGAGGCCTTCTCC 59 201221 201244 CAGAATTAGGTCCTCAAGAAAGAG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299987 1 1 10 147 3L 293047 293065 ATACCACGTGGTACTTGCC 59 293176 298967 TTTGGCATTTCGTCACTGG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299988 3 1 10 90 3L 291096 291319 GAGGATATTGTCATCAGGAAGGT 59 291367 291387 AAAGTCTTCGCAGCATTACAC 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 3 5 6 82 3L 352338 352358 TCAGTATCTCGAGTTATCCGA 57 352402 352488 CATCAACCCATCTCACGAC 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112807 1 1 4 174 3L 436842 440504 ATCGGAGCAAGATCTGCTC 59 436686 436704 CACTGCTATTTGGATGGCC 59 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 3 2 2 73 3L 898360 898378 AGTAATTCCTGGCTGGAGG 58 898477 898495 GATATAGCCGAAGCAGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 1 4 6 80 3L 982230 982248 TGCATCTCTATGGTCTGGG 58 982289 983867 AGTCGATCATTTCCTTGATCAG 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 1 2 6 97 3L 1024533 1024551 CTAAGTTTGCCGTGTGGAC 59 1024396 1024474 CTTAACCCAAATCTGCTTGGT 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 3 2 3 80 3L 1254260 1254278 CAAGAAGCCAAAGGTCGAC 59 1254321 1254413 TCACAGTCGTCCACATTCTC 59 NA Nonspecific Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 3 3 3 84 3L 1299135 1299153 ACATGCAGACTGTCTACGG 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705 2 1 3 135 3L 1527291 1527309 CAGCGATGCGACATATTCC 59 1526383 1527193 GAGAGTTCGTGAGTCCTCTC 59 NA Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 1 2 2 135 3L 1821295 1821313 AACACAGGACCCATAGCAC 59 1821411 1821817 GCAACACGTAGACATAGGGA 59 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 2 4 4 71 3L 2253685 2253789 CTGTATGGCAACTCCATTCTG 59 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 2 1 1 60 3L 2475186 2475204 TCCTTTCAATGTCATGCCA 57 2475081 2475099 CCGAGATGCTGTATGTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 2 2 4 85 3L 2941549 2941572 GTCTCCTTCCATCATATCAATCTG 59 2941616 2942575 GTTTGCTTTCCTGTGTCGA 58 NA Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 1 2 2 80 3L 3039187 3039208 CCAAGTTACTCCAAGAACTGAC 59 3039247 3039335 TGTGAAAGACCGTATAGTCCA 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 3 6 15 80 3L 3083796 3085208 TCGCCACTTATATGGTCAC 57 3085252 3085270 ATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 2 3 3 110 3L 3168165 3168184 CACATGATCTGTCCATCGTG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0300621 1 1 2 94 3L 4180797 4180815 TCAGCTATTGGTACTGCCC 59 4180346 4180742 GTTAACGATCTCTTCCTTGGTC 58 NA Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 3 2 2 80 3L 4241696 4241914 AGGAAACGTACTCCATGCT 58 4241958 4241976 GGGTTACCAGTTTCTTGCA 58 NA Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 1 1 1 60 3L 4487529 4487550 CTAAGCCAGAGCTACTTTACTG 58 4487433 4487451 AGGACACCTTCGGAATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0073359 1 1 2 88 3L 4811656 4812064 AACATAACCGATGATGTTCGAG 59 4811589 4811607 ATACTGGCGCGATTAACCT 59 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370 3 1 2 89 3L 4811658 4812901 AAGATCACCGATGATGTTCG 58 4811588 4811606 CATACTGGCGCGATTAACC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 1 4 10 82 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 vn FBgn0003984 FBtr0300010 3 1 2 125 3L 5810676 5810695 ACTACTGCTTCCATAATGGC 57 5806560 5809754 ATTCCTGCCAAGAGATGTC 57 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077055 3 1 3 145 3L 6105286 6105476 ATGCTCTTCGCAGATTCCT 59 6109056 6109076 GGTCCGAACATTTGATATGGA 58 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 3 3 3 81 3L 6190640 6190720 CATCAGATGATACAGAAGATTCTGC 59 6190758 6190777 GGAATTGCTCCACAAATCGA 59 NA Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 1 2 2 119 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750444 6750462 TTGGCAATCGCATCTTGTC 59 NA Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 3 2 2 96 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124306 7124327 CTTGAAGAGACCGTAGAATTCC 58 NA InUTR Drosophila melanogaster 61 corn FBgn0259173 FBtr0299640,FBtr0299641 3 2 2 81 3L 7137995 7138070 GTTGATAAGAACAAACTGCAGC 58 7137935 7137953 GCAGCTTCAGGTTAACGTC 59 NA Drosophila melanogaster 61 corn FBgn0259173 FBtr0299641 1 1 2 80 3L 7137097 7137171 AATGGTACTCAGGTCCAATCTC 59 7137038 7137056 GTGCTCCAATTGATTGGCA 59 NA Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 3 2 2 111 3L 7315585 7315662 GTTGAAAGAATCCGTCAAGGA 58 7315494 7315513 ATTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089850 3 1 3 90 3L 7596576 7596773 CACTGGAGACAGAGCTGAC 59 7596826 7596845 GTAAGTCGAAATCGCTCTGG 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 3 11 15 80 3L 7693645 7696960 TATGCTCCATTACAGGCGG 59 7693583 7693604 AGTCATTGACAAATGTCAAGGG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 1 5 13 83 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140 1 2 4 106 3L 8960522 8960540 TGAAGAACATCTCGGGCAG 59 8960605 8960677 GTAGGATTCAGAGTTCTTTGACTC 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 2 2 4 114 3L 8960606 8960688 AGTCAAAGAACAGTCGGGT 58 8960766 8960784 AACTTCAGGCCGAATAGGG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 2 5 5 82 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986077 8986096 TGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462 3 1 5 80 3L 9100805 9101070 CTGTATATCCGCCAGTTACTG 58 9100745 9100763 ATGGCTGATATTGCATGGC 58 NA InUTR Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 3 3 3 102 3L 10143593 10144086 ATCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 2 2 2 80 3L 10630669 10630750 ATAAGAAACTGGGACGAGCA 59 10630608 10630626 ATCGTAGGGTTTAGCCTGC 59 NA Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 1 4 4 114 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865344 10865362 GCTTGATATCCGGATTGGG 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 3 3 4 80 3L 11769205 11769288 ACTTACTGTGATGATACACCAC 58 11769146 11769167 TAGCACTTCACATATGTGTTGG 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300724,FBtr0300722 2 2 4 94 3L 11872544 11872616 CCGATCCATTGCTCATGTG 59 11872671 11872692 AGCACAAGCCATATCTAATTCC 58 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 3 2 2 245 3L 12194027 12194045 TATCCGCGTCAGAAGAACC 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300887 1 1 4 80 3L 12531668 12532106 GGAACGTGGAGAAATCAAGG 59 12531546 12531566 ACATTCAGAGAACCAATCCGT 59 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 2 2 3 102 3L 12743830 12744415 TCGTCGACAGATTCATCCC 59 12744481 12744499 CCAGGACCTCTTGCTTCTC 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075820 2 1 4 131 3L 13460965 13461555 AATGTCCTACAGGCGTCTG 59 13460852 13460870 CGCTAAGTGAACTGGACGA 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075820 3 1 4 133 3L 13460965 13461555 AATGTCCTACAGGCGTCTG 59 13460850 13460869 TACGCTAAGTGAACTGGACG 59 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 3 3 3 81 3L 14621498 14621575 GATGGAAGCTTAGGAGATGG 57 14621436 14621457 GATCGTTGTTTATCATCTGCAG 58 NA InUTR Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651 1 1 3 90 3L 14733239 14737299 GCGGTTCAAGAATCTAATGCA 59 14737351 14737369 TAGAGCAACCGCTATGACC 59 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 3 2 2 65 3L 14786345 14786363 GGTGATCATGAGCGATGAG 58 14786870 14786888 TCCAGTGTATAACCACGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 2 2 4 95 3L 15301924 15304065 GGATGATTGTGGGACTTTCC 58 15304123 15304141 ATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 1 2 2 88 3L 15529543 15540982 CGACTTAGATCCGGAATCCT 58 15541033 15541051 TGACGGTGGGATCTTTGAC 59 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543,FBtr0075541,FBtr0075542 1 3 3 119 3L 15809126 15809144 AAGATAACGGGTCTGCTGG 59 15806716 15809043 AAGAATGGCAAAGAAGGCG 59 NA Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 1 2 2 90 3L 16029720 16029741 CGAAATTTCAGCGAAATACTGC 59 16029792 16029885 TGTTCGATTCTCTGTCCGG 59 NA Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 2 2 2 101 3L 16029309 16029327 GTCAGGGATTACCTGGTGG 59 16029389 16029470 GGTGTTCATGTTCTTGTATCCA 58 NA Drosophila melanogaster 61 Zn72D FBgn0017453 FBtr0075493,FBtr0075494 3 2 2 139 3L 16100798 16100820 AGTCTGTCTCCGTTAAGATTACC 59 16100615 16100699 CAAATCAGCCAAAGCACGT 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 1 3 6 87 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 tra FBgn0003741 FBtr0100244 1 1 2 80 3L 16584019 16584112 AGCATCGAGTGTCATATTGTG 58 16583959 16583979 CCTAGCTTCTCTTTCTCTGTC 57 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 1 5 7 80 3L 16952972 16954605 CAGGAGCTACCAGATTCGA 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 scaf6 FBgn0053522 FBtr0091474 3 1 3 80 3L 17032429 17032672 GATATACTCCATCACTGCATGC 59 17032370 17032388 GCAGAACATCGGAATGACG 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075245 3 1 2 145 3L 17332197 17332272 TTACACGGACTAATTGCTCG 58 17332071 17332089 GAGGTCGAAGAGGAGTAGC 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 3 3 7 81 3L 17535994 17536012 GATGTGGATCATCGTCAGC 58 17536057 17536617 CGGTGTCTTCATTCGATGG 58 NA Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 2 2 2 292 3L 19103337 19103355 GAGATTCAACCACCTGCAC 58 19101361 19101379 CGTTCAGACTCAGGTTGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 2 2 2 85 3L 19678980 19679065 GAAGTCGGTGAAACAGTGTC 59 19678914 19678932 GCATCAGTGTCCTCAATCG 58 NA Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 3 2 2 85 3L 19678982 19679066 AGAAGTCGGTGAAACAGTG 57 19678915 19678933 CATCAGTGTCCTCAATCGC 58 NA Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917 2 1 2 124 3L 19913349 19913367 TTAGCACCCTGGCTAACAC 59 19912380 19913266 CACTGTATTATCTTTGGAGCTCAG 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678 1 2 3 166 3L 21321362 21322909 TGGGCAAGGTCATAATGCT 59 21325732 21325750 CCAGATTTGCAGCTTGACG 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 2 1 1 60 3L 22463862 22463883 AATATGCCATCGTAAAGGATCC 58 22464974 22464994 TTTCCAGATTAGACAAGAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 1 3 3 80 3L 22718630 22718710 GATTGCGTGTCAGTACCAC 59 22718752 22718772 AAGGTATACGCCCATCTAGTC 58 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 3 3 3 144 3L 22870965 22871046 ATTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 2 1 1 91 3L 23119447 23119468 CATGCAAATTACCTGAGTTGTG 58 23119835 23119854 CACATTACCGTCACTCTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 2 2 3 113 3L 23734175 23739299 AATTGGACAGGGATCCTACG 59 23739375 23739393 ATAAGACCAGCTTGACGCA 59 NA Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 2 2 2 80 3R 1902 7790 CCGTCAAGAACTTCTACGG 58 7834 7852 TCTCGTCTCCGTTAAACGA 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078971,FBtr0078968,FBtr0078973,FBtr0078972,FBtr0078969 1 5 5 126 3R 66130 66148 CAAGAGGACTTGGACTCGG 59 66235 66320 TAAAGTAAAGCTTTGCCGTGTC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 2 2 2 91 3R 163946 163965 GGGTGAATTCAACTTCGGAC 59 164016 164777 CAAAGGTATACACATCAACCGA 58 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 3 4 4 176 3R 206341 206431 ATACCGGGAATGACACTGAC 59 206570 206588 ATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 3 2 2 80 3R 231257 231329 GACGTACAACTAAGTCTGAGG 57 231371 231389 CAGCCTCTGGTAACTTACG 57 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0301885,FBtr0078854,FBtr0078855 1 3 5 122 3R 454061 455858 CTAATGGACAGACTGGCCA 59 455944 455962 TACATTGGTCGGGTAACCC 59 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 1 2 3 80 3R 464125 464277 GTAAGCCTACAGGCAAACC 58 464063 464084 TGGTGGACATATACTGATCCAG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 10 10 92 3R 561271 561375 CGATCTGCATGTGAAATACGA 59 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0100434 3 1 2 80 3R 1181948 1182154 CGGCTCAACTAGATGAACC 58 1182197 1182216 GATTGAGGACATTGGCTCTG 58 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 3 3 3 80 3R 1392053 1392072 AACTCTAATGCGAAGCTCAG 58 1392114 1392201 CGTCTCCAACTTGAAGAAGG 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 2 2 2 122 3R 1605224 1605528 CACATATCAAATTAGCCTGCTG 57 1605610 1605629 AAGATATCCAGGTGGTCCAG 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081600,FBtr0081601 2 2 3 106 3R 3044111 3044315 CCTGCTGATTTCTTTAACAAGG 58 3044026 3044046 GACGAATAGTTGAAGATGGCA 58 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081600,FBtr0081601 3 2 3 108 3R 3044111 3044315 CCTGCTGATTTCTTTAACAAGG 58 3044024 3044044 TCGACGAATAGTTGAAGATGG 58 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 3 2 2 84 3R 3612901 3612984 CTATAACTCTGTTTCACAGGTTCC 59 3612840 3612858 CGTTAGAGGATCCGATCGG 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 1 3 5 179 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 2 3 5 180 3R 3697535 3697553 GTATACAGATGGACGCCGA 59 3691470 3695954 CTCATGTAGAGTAGCCGCC 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 2 2 4 80 3R 4612641 4618840 CAAGTTACACCTGAGATAACCC 58 4612582 4612601 CTCGAGCGCTGATTTATGTG 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301878,FBtr0302326 3 2 4 80 3R 4622470 4622490 AAGACTGACTAACGAGATTGC 58 4619073 4622433 GTCTTTATTTCCTCTAACTGGGTC 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 2 4 8 80 3R 4661221 4664122 GAGTCTAAGCCAGTAGAATCC 57 4661161 4661179 GGGACTTGATGCATACGAG 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 3 4 8 80 3R 4661229 4664128 ATGTCCGAGTCTAAGCCAG 58 4661167 4661185 TGATGCATACGAGAGTCGG 59 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 2 2 4 95 3R 4766831 4766852 TGAATCTGTATGACCTGTTCGT 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 2 3 5 149 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 CG8861 FBgn0037676 FBtr0301210,FBtr0300335 2 2 2 76 3R 5121441 5121459 GTTAGTGAACTGTCGACCG 58 5121249 5121268 CAATACGTTTGTGTCTCCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052,FBtr0082054 3 2 4 103 3R 5195422 5196744 CGGCCAGTATATCGCTCTC 59 5195337 5195357 ACCATCGTTATTCAGCAATCG 59 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0082064,FBtr0082065 2 2 4 80 3R 5348543 5348564 AACTGGCACGAATAATCTTACC 58 5348605 5349933 ATGCCAGAGACTTGATTGC 58 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207 1 2 4 80 3R 5348545 5348566 CTGGCACGAATAATCTTACCAC 59 5348604 5349269 GTTGTGTCTGATCTTGATTGCT 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 3 4 4 81 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592835 5592908 GATCATGTTGTGCAGATGCT 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082208 2 1 9 80 3R 5841638 5844228 CGCCAATATTAGTTCCAAGGT 58 5841578 5841596 ACGGTTTGCTTACAGAAGC 58 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082254,FBtr0082253 2 2 8 94 3R 6359725 6387645 ATACATCAGACCCTGGACG 58 6359649 6359668 GACTGAGGAATACAATCGCC 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273345 3 1 7 99 3R 6691359 6692260 AGCATACCAGTAGTCATTTCG 58 6691280 6691298 GTCCATCATCGAAGACGTG 58 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 1 5 5 126 3R 7047973 7047991 GTAAGGTTAAGGCCTTCCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 1 4 4 82 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 3 2 2 80 3R 8180556 8180650 TTGGATATAGCATCCCTTGGAC 59 8180497 8180517 AATAGGCTGGTCATTTACCCA 59 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082604 3 1 2 129 3R 8218279 8218552 AAAGTGACCATTGCGAAGC 59 8218068 8218188 GATTACCGAATACCGGATCCT 59 NA Nonspecific Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 3 3 4 84 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338671 8338690 CCGATCCAGAATAACACCAC 58 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657 2 1 2 189 3R 9090849 9090867 GATCCTACACGAGGACTCC 58 9091020 9091478 CTTGATTTCGTTGTCGGCT 58 NA Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 1 2 2 92 3R 9193803 9193821 AGGAATCGTTGGAACTCCG 59 9193875 9193985 GCATTATTGTAGTTGCGTCGT 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082770,FBtr0082768,FBtr0082767 2 6 6 80 3R 9204502 9204740 TTGCCCTACATCTACAATCCT 58 9204442 9204462 GTCCAGTTCACTTACATCGTC 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 3 4 6 155 3R 9203380 9203627 AAAGATAACGGCCAAGAACG 59 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 2 3 5 81 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522055 9522556 GTCGTAGTTTGTATCTATCCGG 58 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 3 3 3 86 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610097 9610116 CCTTGGATCATCGATCTGGA 59 NA Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 3 2 2 111 3R 10442724 10442910 CAAATTGATCCTGCAATACGAG 58 10443039 10443057 GTAGTTCTCATCGCTGTCG 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 2 7 13 147 3R 11122419 11125005 AAATACGATGAGGTTGCCC 57 11126515 11126533 AGACTTCCAGGGACTTCAG 58 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 3 1 1 89 3R 11158365 11158383 GACCTGAACTTCAGCAAGG 58 11158227 11158246 ATCAATGTCGTGCAAGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 3 3 3 95 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191415 11191497 CGACCAGATTAATTTGCTCGT 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232 1 1 6 80 3R 11903250 11908595 CGTCCGTATAATCCTCTTCC 57 11903189 11903208 ATAATGCGATCTGAGAGCAG 57 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 Dhfr FBgn0004087 FBtr0083295,FBtr0110910 2 2 2 147 3R 12307054 12307122 GCGCATTAAATCTGAGCTG 57 12307233 12307251 CACTATGTTCAGCCGATCG 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036 3 4 6 80 3R 12458424 12458443 CGGAGTAGTCCATCTGATCC 59 12458486 12461281 TTCTCAGCATTCTCCTGCA 59 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 2 2 3 111 3R 13219464 13219545 TGAAGAAGATGGATCCTAGCG 59 13219301 13219322 TCGCAAAGGTAGAAATTGTGAG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 3 4 7 80 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834636 13834654 TTCGTGTTACTCTTGGCGA 59 NA Nonspecific Drosophila melanogaster 61 sr FBgn0003499 FBtr0083542 3 1 3 81 3R 13922386 13922504 CTCAATTAGCTCAGGCCGA 59 13922547 13922567 TTGCCATACAAGTAGGGACTC 59 NA Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 1 1 1 76 3R 14046402 14046422 GAATGTGGAGAAATTTCAGCC 57 14046523 14046541 TGGCCACCAGAAAGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 1 3 6 86 3R 14079504 14079582 GATTGGAGATCTGCCTGGT 59 14079436 14079454 AAATACGACTGCGGAACCA 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089367 2 1 2 81 3R 14555969 14556058 CATTTACAGTAAGGATCATCTCCG 59 14556096 14556116 CAGGATGTTCTTCACCATCAC 59 NA Drosophila melanogaster 61 bnl FBgn0014135 FBtr0083795 1 1 2 80 3R 15621986 15622004 CGAGGACTCAAGTTCCGAG 59 15620047 15621942 TGCAGACACAGGAAATCGT 59 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083856 1 1 2 141 3R 15727512 15728562 GTAAGTGCTCTGGTCAAACAC 59 15727391 15727409 GGCTCCAGTCTCATCAGTC 59 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 3 3 3 86 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045630 16045648 GATGAAGCTCCGGTATCAG 57 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255,FBtr0083959 3 2 8 88 3R 16628265 16631681 ATTTACCAGTAGTCGGTAAACG 58 16631730 16631748 TCCTATTAAACCGCTCGGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084078 2 1 22 81 3R 17200835 17200854 CAACAGTCCCAGAACTACAG 58 17196356 17200793 AAATCAAACCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 2 22 22 81 3R 17202595 17202613 TTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084061 1 1 22 80 3R 17200833 17200853 AACAGTCCCAGAACTACAGTG 59 17181965 17200793 CAAATGTCACTTGAGCCTCTG 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 2 4 4 147 3R 18446765 18446783 AAGAAGTCCACTAGCAGCA 58 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 2 3 3 80 3R 19574386 19574470 GCCGACATTATCATCAAATGG 57 19574510 19574530 TTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 1 3 3 96 3R 19633219 19633303 ATTCACAATCTCACCAGCGA 59 19633142 19633160 GTTCAACAGAACCGAGCAC 59 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 1 2 3 190 3R 19812924 19813001 CAGTAGCAGAAGACGATTAGAG 58 19813152 19813170 GTTGTAGTGGGAGTTGGAC 57 NA InUTR Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 3 6 6 82 3R 20082819 20082910 CACGGTTATCATGGTTCCTC 58 20082756 20082775 ATAGTCGACTGTAGATGGCC 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301368 2 1 6 91 3R 20079843 20080142 TCGCGGTACTTGAATAAATCC 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 2 3 3 80 3R 20677648 20677719 CTGTTCCTCAACCTACTCCG 59 20677758 20677780 CTGCTAAGAAGAAATTCCAGGTC 59 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0084893 2 1 4 96 3R 21449117 21449208 AAACAATCGCTAATTCGCGT 59 21449040 21449058 TCTGAACGCTGTCGTACAG 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384,FBtr0113388,FBtr0113385,FBtr0084927 1 5 7 113 3R 21539670 21548145 GTTTACAGAATCAACTTGCAGC 58 21539578 21539596 GATTCATCGCTTCCATCGG 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113388 1 3 7 80 3R 21531747 21532017 TCGAAGATCTGGGTATCCCA 59 21531686 21531704 TTGTGGTTGAGTTGGACGA 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 3 3 7 94 3R 21575099 21577791 CTATAAATGAGGCCACTTGCTC 59 21575026 21575044 ACAATCGCTCTCCTGATCG 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 1 3 5 88 3R 21711544 21711628 GGAACCAACGGATAAATTCG 57 21711678 21711697 AGAACATGATGAGCAGTGAG 57 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 1 4 5 130 3R 21870341 21871201 TCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 1 3 3 85 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884603 21884621 GTACTGGTACACCAGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 3 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809930 22810007 TTAAAGATTTGGCTCTCGCT 57 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 2 2 3 85 3R 23058250 23058268 ACACGATAGTCTCACTGCG 59 23057910 23058202 ATCTTCACATTCCTGCAGCT 59 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 3 2 3 114 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652795 24652813 GCTATCCTTGACGAAGCAC 58 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888 1 1 2 80 3R 25695764 25696968 CGTGATAGGACCTAATAGCTC 57 25697010 25697028 GCATCTGTCTCAATGACCT 57 NA Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 2 2 2 80 3R 25948595 25948614 TTGGGTCTGGATTATCTGGT 58 25948475 25948553 TACAACTAATGGCTTCGGTG 58 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 3 2 2 80 3R 25994097 25994175 ATATTACATCCATAGGACACCC 57 25994038 25994059 GGATTCCAGTGACCATATAGAG 57 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 2 12 12 84 3R 26398250 26398334 ACATTAAGAACATCTCGGACGA 59 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 2 10 12 114 3R 26398692 26398710 CTGGTGGAGAAGAACTCGT 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 1 6 12 139 3R 26359221 26397540 ATCACTGAGACTTCTGCCA 58 26397642 26397661 AGTATGGTTATCTCCTCGGG 58 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 1 2 4 80 3R 26742431 26749147 GAGAAACTCAGAATTTGGGCC 59 26749187 26749207 ATCCAAACTATTTGCTACGGC 59 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 3 1 1 96 3R 27130715 27130735 GGCGATCTTCAACAGAATCTG 59 27129987 27130005 ATTGCGACAGGTTGATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 2 5 5 80 3R 27426314 27426404 TACATGAGGATTCCTGATCGC 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 1 3 6 80 3R 27554138 27554159 AAACGATCAAAGAACTCCAAGG 59 27554199 27558658 GGCCTTAGTAGGAGTAACGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 2 3 22 82 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707521 27707542 CCAGGTCCTGATTGTTATTGTC 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 3 8 8 168 4 157779 157853 GTCGAGCAACCTTAAGACAC 59 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 2 5 6 199 4 323146 325653 TTATAGTCTTCGGGCTGCT 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 2 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 3 4 4 80 4 714052 714070 ACCAACGATGAGGAGTACG 59 713453 714011 AACATGAGGTTGAATTTCCTCG 59 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600 1 1 2 80 4 844179 844197 ATGAGAAGGAGCATTCCGA 58 823944 844135 CGTAATGAGCCTGACTGAG 57 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114111 1 2 4 80 U 1352558 1352576 TCGTGGTACGACGTATTGG 59 1352620 1352690 CGCCTTTGAATAACCGTCC 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 3 3 3 82 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270782 1270803 CACAATATAGTCGAACAGCTCC 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0300428,FBtr0300430,FBtr0070261,FBtr0300427 3 5 9 94 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1541414 1541432 AATGACGCCACTGAGTAGG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0300428,FBtr0300430,FBtr0070261,FBtr0300427 3 5 9 94 X 1531164 1531326 CGTTGCTAGGTCTCAACAC 58 1541414 1541432 AATGACGCCACTGAGTAGG 59 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0070308 2 1 2 96 X 1760089 1760107 ATGAACAACCGCTTCTTGC 59 1760166 1760255 AGAGTCCCTTTAGTCTGTGC 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 3 4 5 90 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786136 1787442 TGGTAGAGTATCATATCCTTGCTG 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344 2 1 3 80 X 1924291 1924312 TCTTAATACTGCCTTCGATGTG 58 1922768 1924253 GCTGTATTCTGGAGATCATCTG 58 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 1 3 3 103 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 3 2 2 93 X 2268796 2268815 GATATCTACTCCACGTCGGA 58 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 2 4 8 80 X 2386427 2386445 AGTAATGATCGCAGACCGA 58 2384862 2386384 TCCAACGTCGTTATTCTCCT 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 3 3 3 82 X 3360656 3365919 GCCCAATGTCAAGAACTATATGG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 2 1 1 154 X 3783470 3783488 AAGTTTGGACCGGAAGGAG 59 3783754 3783772 TTGTCGCTGTCATAGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 1 2 5 83 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247639 4247987 TCTAGCCAGATCTTGGCTG 58 NA Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 1 3 3 81 X 4345063 4372194 TGTAAGTACTACGATCCTGAACTC 59 4372233 4372252 CAGCTTCAGGATGTCATTGG 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0299588 3 1 5 103 X 5137510 5137924 ATCCATAAAGGCCAACCAG 57 5137990 5138009 GAGCGTTTGATGTTGTAGTC 57 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0299589,FBtr0290088 1 3 5 175 X 5097416 5097434 GAGCTGCTGGATCATTGTC 58 5111588 5115289 ATCTCGATGAGCAGGTCTG 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 3 5 7 103 X 5277589 5277610 CTCTAATGACAATATGTCCGGG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 3 2 3 81 X 5559771 5559789 TGGAGGACTTTCTCCTGTC 58 5559648 5559728 TTTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 1 2 2 80 X 6132167 6132185 AGATGACTATCAGGCGGTG 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145 1 2 3 166 X 7764352 7764370 GTTACGGAACAAGCTACGG 58 7764006 7764223 CTTCGGGTTTATTGTCCTGG 58 NA Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 2 1 1 170 X 7769579 7769597 ATTCATGGCATCGAAGGCT 59 7769824 7769845 GCAAACGAATGTTAGATTCACC 58 NA DesignNoJunction Drosophila melanogaster 61 sws FBgn0003656 FBtr0301675 3 1 3 159 X 7853123 7855223 CATTCACACCAATGGCCAC 59 7852487 7852506 AGCAGCTCCAAGATTATGCA 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 2 6 7 173 X 8131041 8131059 TCAGTCGTTCCAGCATCAG 59 8131194 8131276 TATAAAGGATATCCCGCCTCG 59 NA Drosophila melanogaster 61 CG32711 FBgn0052711 FBtr0302081 3 1 2 95 X 8302799 8303443 TGTTAAGTATTCTCCACCGCT 59 8302724 8302742 GGAATCACCATGCGATAGC 58 NA InUTR Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 2 1 1 267 X 8377621 8377639 TTGCTGCGAATAAAGTTGC 57 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 3 2 3 103 X 8381363 8381382 GAAACGGAGATGTACACGTG 59 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 2 2 6 81 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442549 8445793 GGTAAATTGTCCTGTATCGCC 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 2 4 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442550 8444125 TCATTCATGCCTGTATCGC 58 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 1 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466339 ACCTTGTTCAGTTCATTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271,FBtr0071270 2 2 10 86 X 8770365 8770388 GAGTAAATCATTTAGAGACGAGCG 59 8769884 8770074 GGTTCATCACCCATGTCGA 59 NA Drosophila melanogaster 61 CG9817 FBgn0030219 FBtr0273444 3 1 2 145 X 10504473 10504491 ACTACCTGGAGATGCATCG 59 10502859 10504364 AACTTCAGCCATATCGCTG 58 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 1 5 5 132 X 11029017 11029035 CAAGGACATGCTCATCGTG 59 11027710 11028925 GGCTGTGTATTTGTATACCATGG 59 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299935,FBtr0299936,FBtr0299937 3 3 3 83 X 12346608 12346714 GCCCGAAATCATTAAGGGTG 59 12346757 12346778 CCAATTAGCATTTCGTAGAGCA 59 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748 3 1 3 86 X 12979685 12979705 AAAGTAGATGTGCCCAATTGG 59 12978594 12979638 ATTAGGTAACCTCTGGAGCG 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0112849 2 1 4 80 X 13094934 13095648 CACAAACCAGGATGCATGAG 59 13094873 13094891 GACTCCGCCAATATTTCCG 58 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 2 2 3 113 X 14474872 14475008 ATCACCGATTCGACATGCT 59 14475627 14475645 GTTTCAGTAGCGCATTGGT 58 NA InUTR Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 1 2 2 80 X 14892104 14892124 GAACGAGTGATGGACTATGTC 58 14892161 14893908 CGGACAATAGTTTAGTACCTTCTC 58 NA Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 3 2 2 94 X 14918909 14918927 GGAGAATAGGGTGGACCTG 58 14918985 14924634 TAAATTCGTTCGGGAGCGT 59 NA Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 2 2 2 104 X 14944078 14944097 TGAGCTAATGAAGCCTTTCG 58 14944162 14944243 TTCTTAAAGGCTTGACTCTCG 58 NA Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 2 2 2 90 X 15601825 15601843 AAGGTGTCCGACGATAAGG 59 15601686 15601773 GGAAATTCACGTTCTGAACCA 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0112827,FBtr0074099,FBtr0112825 2 4 9 104 X 15717251 15717340 CGTCCCAAGATTTCTATGATTACAG 59 15717402 15717420 GCGGAATTCCAGTTTCGTC 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 2 5 5 80 X 15749870 15749890 CTATAATCGCGTTGGAATGGA 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 2 3 3 104 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802263 15802281 TTGCGTACTGATTTGCTCG 59 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299536 2 1 3 82 X 15843021 15844388 GCAGAAGCTGTCTGATGAC 58 15842957 15842975 ATACCACGACGGATACCAC 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 1 7 7 80 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881957 15881978 GTCATCCGAAATAGTCATACCC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 3 3 4 92 X 16190156 16190353 CCCTAGTTGCGATTCTACAG 57 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280 2 1 3 87 X 16342748 16343913 TTATGAACACGCTAGCGGA 59 16343964 16343982 CAAATTGCCGACAAATGCG 59 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 2 3 3 103 X 16532324 16532446 TCTTCTTGAAGAAGACTGGCA 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 1 7 7 60 X 16579562 16579580 GATATCCACGCACATGCAG 59 16579424 16579442 GAAGTTCTCGTAGTGCACG 58 NA DesignNoJunction Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 2 4 4 80 X 16649790 16649879 TGAAAGTCAGCACTGTGGA 59 16649728 16649750 CATTGGTGTTCGAGATAAAGACC 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0074386 1 1 4 147 X 17019043 17020045 ACACATAGGTGACACTACGA 58 17020371 17020389 GATCAGTAGGCGAGAGTCC 59 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443 2 1 3 118 X 17183062 17185293 CATTCCCAACTTGGATGCC 59 17182962 17182980 ACTCGTCAATCATTTCGCG 59 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 1 3 3 80 X 17469922 17469940 CGTTCAGTTTGGGTTCGAG 59 17469786 17469878 ATTATCGGAATGGGCTTGC 58 NA Drosophila melanogaster 61 CG12992 FBgn0030846 FBtr0300778 3 1 1 62 X 17484483 17484501 GGAGGACACTGTGAAACAG 58 17484583 17484602 GATGGATTCCTTCGATTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 2 3 4 176 X 17767426 17771465 ATAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 3 3 3 86 X 18095256 18095334 CAGATGGTAGGACAACAGC 57 18095383 18095402 GTTCTTGTCCATCTGATCGA 57 NA Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 3 2 2 81 X 18392029 18392048 CAAGGTCATCAGGAACAAGG 58 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 2 3 3 108 X 18461161 18461554 GACTACTTGAGATTGTTTGGCA 59 18461620 18461641 ACTCCAAGTGATAGACATTGGT 59 NA Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 2 1 1 81 X 18553391 18553409 ATGCATTCCACCAATGAGG 58 18553513 18553531 ATTCATCGCAGCTATCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 1 2 4 80 X 19470777 19470797 TCCCTACTTTAACATGAACGC 58 19470418 19470735 CAGTCGTTCTTCGGAAGAG 58 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0070034 1 1 5 80 X 19905588 19907144 CGCACCTAAGGTAAATGGAG 58 19905527 19905548 GTAGAGCATATCACATCCATGG 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 1 2 13 95 X 20105915 20105933 CAGGCTACGAACATTCCAC 58 20103228 20105857 ATTGTATTCATCATCGCCGT 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407 2 2 13 121 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20104509 20105411 TAGCATGAGCTTTACGTGG 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089402 3 1 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101678 20103195 ATCAAATGCAAGCACTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 3 2 3 193 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077430 21077448 GTTTGAGTTGGGTAGGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 3 2 2 80 X 21241688 21241710 CTCATATTCTGCAAGAGACATCG 59 21241747 21241838 AAGTATCTTTGTAATGGCACGG 59 NA Nonspecific Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070057 3 1 2 123 X 21479655 21479673 GAACCGCATCTTCGATCAC 59 21478878 21479568 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 1 3 5 94 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299522,FBtr0299523 1 3 5 90 X 21900448 21904482 AGAACCGGATAGCCAAGTC 59 21904535 21904554 AATACTGTGTCTTTGGCGAC 58 NA Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 2 1 1 191 X 373209 373227 AACAAGCCCGACATAACTG 58 372993 373011 TAGAAGCTTGGTGCTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300634,FBtr0300652 2 2 2 60 X 7792871 7792891 AAGACTGTGCGTAAATACACC 58 7792831 7792849 TGAGAACGACCAAAGTCAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:G3:22BCb FBgn0011860 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:49Fe FBgn0011885 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32370 FBgn0052370 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A2634b FBgn0082945 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD11a FBgn0086072 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-282 FBgn0067709 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-314 FBgn0067690 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31166 FBgn0051166 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-318 FBgn0067686 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:M FBgn0013700 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073627 3 1 3 136 X 11985398 11985416 TTCGCTTCGGTTTACTTGG 58 11985513 11985611 TAGAAGTATCAACTGCACTCAG 57 NA Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073514 3 1 2 144 X 11473146 11473709 TCGAGCGTTTAGGTAGCTC 59 11473814 11473835 GACTATGCGGAAATCGTTACTC 59 NA Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300454 1 1 2 131 X 657486 657505 TAGTTCAAGTGTCGCCTACG 59 657167 657188 CCCAAATAAAGAAGAGTGACCA 58 NA DesignNoJunction Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100650,FBtr0077353,FBtr0100652,FBtr0100651,FBtr0077352 1 5 5 185 X 21884788 21884806 GTGGCTCTAGTTCCATGGA 58 21885019 21885037 TTCTCCTACTGGCCATGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 3 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295,FBtr0300487 3 3 3 113 X 20542781 20542799 CAGAAACCTGGGTTTCAGC 59 20542566 20542708 GAACCACGACTTCTACTTTAAGG 59 NA Drosophila melanogaster 61 CG32506 FBgn0052506 FBtr0300211 2 1 1 80 X 20335194 20335212 AATATGGATGCCCTACAGC 57 20335255 20335829 GAGTTCGCTACTGTAGACAC 57 NA Drosophila melanogaster 61 Bap FBgn0010380 FBtr0074789 2 1 1 81 X 19625113 19625419 TATTTGAAAGTACGCAGCTAGG 58 19625461 19625479 AAGATCTCGCCCTTCTTGG 59 NA InUTR Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 2 2 2 112 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362444 TATTGGCATACGCATCATCC 58 NA Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 2 2 2 95 X 19177103 19177121 ATTGCTCACTGGAGAAGCT 59 19176960 19177044 GAATGAGACCAATGAGCGG 58 NA Drosophila melanogaster 61 Muc18B FBgn0031000 FBtr0074673 2 1 1 60 X 19110236 19110256 AATCAGATACTGATGCTCCCA 58 19110278 19110296 TCATCGGTACTGGTCTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14195 FBgn0030998 FBtr0074692 3 1 1 145 X 19104365 19104882 ATTCTTTGCAGGTATCGGCT 59 19104239 19104257 ACACGAACGAGAGGAACAG 59 NA Drosophila melanogaster 61 CG7453 FBgn0030991 FBtr0074666 2 1 1 60 X 19075039 19075060 GGCTTACTGGAAGTAATCTTGC 59 19075078 19075099 GTAACAATGGGTACCACATACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42506 FBgn0260232 FBtr0300640 3 1 1 80 X 18907432 18919668 GGAATACAATACAAAGACTGCC 57 18919709 18919727 TAGTTGCTATAGCTGCTGC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722,FBtr0112723 1 2 2 113 X 18738062 18738538 AAGATGCAGCAAATGGACG 59 18738615 18738633 CTTGATATTGCGCACCACC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6617 FBgn0030944 FBtr0074615 2 1 1 198 X 18544121 18544199 CTACTTGGTCACAGAGGGC 59 18543941 18543959 GAACAGATAGCGATCGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Vps4 FBgn0027605 FBtr0074504 3 1 1 102 X 17802739 17802853 CATCAAATATGAGGCACAGGG 59 17802913 17802935 CTTCTTCAGGTACTCCTTTAGCT 59 NA Drosophila melanogaster 61 CanA-14F FBgn0030758 FBtr0074292 3 1 2 164 X 16462304 16480970 AAACGAAGTTAAGAGCGCG 59 16462158 16462177 CACCCGTAAGAGTTGATCAC 58 NA InUTR Drosophila melanogaster 61 CG8931 FBgn0030717 FBtr0074134 1 1 1 98 X 15878564 15878639 CTCAAATGCATAAGTATCGGC 57 15878699 15878717 GAATAGACCGGGTTTCTCG 57 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0074015,FBtr0100328,FBtr0290063,FBtr0100326 1 4 5 86 X 15272272 15272290 TTTCCAGGACGCTACAGTC 59 15271609 15272227 GGATGATGAGATGTGAATAGATGG 59 NA Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074002 2 1 2 80 X 15188292 15188380 AACGAATTGTTGCTAGGCG 59 15188421 15188442 TCATTATTAGGTTGCTCCACAG 58 NA InUTR Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026,FBtr0112984 1 2 2 80 X 15039441 15039460 GATGATAGGACGAGCTTTGC 58 15039307 15039399 CACTCCACAATCTCACAACG 59 NA Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 2 2 2 93 X 14918910 14918929 GAGAATAGGGTGGACCTGTG 59 14918985 14924634 TAAATTCGTTCGGGAGCGT 59 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073981 1 1 2 80 X 14771623 14771643 ATCGGCATGAATTTCTATCGC 59 14771334 14771582 ATACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 CG9519 FBgn0030589 FBtr0073984 3 1 1 60 X 14750295 14750313 CATCGGAACCCTTCTTGTC 58 14750253 14750271 GTCAGTCTGGCTAATCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32614 FBgn0052614 FBtr0073867 3 1 1 61 X 14026098 14026119 CCTTTAACATCAAGATGCTAGC 57 14026139 14026159 CATGTCAACCTCATTTGACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1673 FBgn0030482 FBtr0073777 2 1 1 80 X 13293910 13293929 ATCATCAGCTAACCGAAGTG 57 13293970 13294057 GGGTAACCAGTTCTTGTTCTC 58 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 2 3 3 81 X 13221563 13221581 CATGCACGATCTGCTTAGG 58 13221626 13221712 CAGCTGCAGGTAAAGTTCG 59 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202,FBtr0290203,FBtr0073733 3 3 3 62 X 13151894 13151912 AGAGCTCACCAATCTGCTC 59 13151850 13151868 ATCCGTCCATAGGAAACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Met FBgn0002723 FBtr0073521 1 1 1 108 X 11512180 11512267 ATATGAAGGATGAGGTGCG 57 11512339 11512357 TAGTCACTGTTGCAATCGT 57 NA Drosophila melanogaster 61 Gr10a FBgn0045502 FBtr0073549 3 1 1 91 X 11307682 11308544 GACCAGGGAGATAGAACACC 59 11307610 11307628 ACACCAATCGACGATCCAG 59 NA Drosophila melanogaster 61 CG15200 FBgn0030278 FBtr0073445 1 1 1 60 X 11077161 11077180 ATAAACGTTGGTAGCCAGTG 58 11077203 11077221 GAGTTCTTGGTCCACAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 2 1 1 93 X 11022095 11022200 AGAACATCAACAGCGAGCT 59 11022020 11022038 GATGCATCCTCGTTGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 v FBgn0003965 FBtr0073386 3 1 1 85 X 10819099 10819117 TGAACCCAGATTCAGCCAG 59 10819164 10819275 CGTGATTGTATCTCCACTTGG 58 NA Drosophila melanogaster 61 CG1582 FBgn0030246 FBtr0073403 1 1 1 82 X 10790891 10790975 ATACGCGGAATATAGCAAGC 58 10790828 10790846 CGGATTCGATCAGTTCTGG 58 NA Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302154 2 1 2 208 X 9366211 9366229 ATTCACAGCATCACAGCAG 58 9319486 9366041 AGTGTATTTACCTGGTGATCC 57 NA DesignRelaxed Drosophila melanogaster 61 amx FBgn0000077 FBtr0071331 3 1 1 61 X 9140283 9140302 ATCGATGTCCTGCTCATCTC 59 9140241 9140262 TATATGTAAAGTGAGCCATCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mxc FBgn0260789 FBtr0071332 1 1 1 109 X 9136247 9136369 CAAAGCATGCCTGAACTGG 59 9136156 9136176 GACGGATTGTTAACAGTCACC 59 NA Drosophila melanogaster 61 CG15369 FBgn0030105 FBtr0071309 2 1 1 177 X 9110961 9110983 GTTTCTCGCCAAGATTCTAATCC 59 9111120 9111191 TTTGGAGAGGCGATAGTGG 59 NA Drosophila melanogaster 61 Dip1 FBgn0040467 FBtr0071302 2 1 1 190 X 9053048 9053066 GGTGGAACCGAAGAATGAG 58 9053282 9053301 TCTAAAGATCCTTGTGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 3 3 3 93 X 9048262 9048419 CTTGCAGGAAGCATCTGAG 58 9048187 9048206 CTTAGGCATGATTGTCACGC 59 NA DesignNoJunction Drosophila melanogaster 61 fend FBgn0030090 FBtr0071349 1 1 1 169 X 9028113 9028133 TATCGGTATCGGTATCCTCGT 59 9021138 9027983 CTTGGAAAGCTGCTGATAGC 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595,FBtr0071352,FBtr0071351,FBtr0114596,FBtr0114594 2 5 5 120 X 8996256 8996535 CAATCATGGTGAACCCGAG 58 8996154 8996172 CACATGGATGACACTAGCC 58 NA Drosophila melanogaster 61 CG12661 FBgn0030071 FBtr0071265 2 1 1 60 X 8817389 8817409 TGAGAATCGCCTAGAGAAGTG 59 8817349 8817372 CAAGCTATAATCGGATCCATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 2 3 3 87 X 8488873 8488955 TACCTTCATCGAATGGTTCTG 57 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 Sptr FBgn0014032 FBtr0071241 2 1 1 60 X 8357954 8357975 ACTACCACTCCAATGTCTTCTC 59 8357915 8357934 TTGAAGACGCGCATAAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114 1 1 3 121 X 7984174 7986006 ACAATAGTTGCAAGCAGCTC 59 7984072 7984090 GTTACATCCGCTATCCGCT 59 NA InUTR Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140 3 1 4 81 X 7787515 7787797 CTATCGATGCTATAAACCTATGGG 58 7787457 7787477 AGTGGGAAAGAATATCACTGC 58 NA InUTR Drosophila melanogaster 61 Ir7e FBgn0259189 FBtr0299673 1 1 1 140 X 7774837 7774908 TTGGAAATGTTGCGACGAG 59 7774715 7774733 TTCATAGCTGGAGGCAAGG 59 NA Drosophila melanogaster 61 Ir7d FBgn0259190 FBtr0299674 1 1 1 79 X 7772527 7772545 GTCCAGAATGCTGAACAGG 58 7772377 7772397 GATGTCAGCAATACGATAACG 57 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 1 7 21 192 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006 3 1 3 115 X 6892768 6893001 TCCACCTGGAAACTGAAGAG 59 6893079 6893097 ACTCCTTGACACTAACGCT 58 NA InUTR Drosophila melanogaster 61 CG4575 FBgn0029920 FBtr0071000 1 1 1 133 X 6844583 6844820 ATGGAGGCCTTTCAAACTC 57 6844916 6844935 GATCTCATCCTCCTTGATGC 58 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 1 2 2 80 X 6736603 6736621 GAACAACAATGGATCCGCC 59 6735973 6736562 GTCATTGACATGTCCCTTATGG 59 NA Drosophila melanogaster 61 Mipp2 FBgn0026060 FBtr0070884 1 1 1 80 X 5978076 5978263 GCCATTAGTTCCTCTGAGGA 58 5978015 5978033 TTTGAGAAGCGTACCCGAG 59 NA Drosophila melanogaster 61 CG3527 FBgn0029714 FBtr0070678 2 1 1 151 X 4446138 4446157 GAAGCGTAAGTTTGTCGGTC 59 4446271 4446353 AAGTGTTGTGCACCTTCAC 58 NA Drosophila melanogaster 61 CG3556 FBgn0029708 FBtr0070674 1 1 1 81 X 4427223 4427305 CCTCGAGGGTATCACTACTG 58 4427349 4427367 CAATAAGCTGATTCCCGGG 58 NA Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 3 1 1 62 X 4275989 4277077 AAGAAGATCCAAGCATCCC 57 4277103 4277121 AGTGTCCTCTAAGTCCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 dgt4 FBgn0026085 FBtr0070642 3 1 1 60 X 4008709 4008729 CTCTAAGAAGTTTGCGTACCG 59 4008750 4008769 ATCATGCCCATCTCCATACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32790 FBgn0052790 FBtr0070621 1 1 1 60 X 3972950 3972970 CAAACAGTACACGATTCTCCA 58 3972992 3973010 CTGCATAACAGATGCAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32791 FBgn0052791 FBtr0070588 2 1 1 80 X 3408947 3408967 GATGTCCAAATCGAGTGTCAC 59 3408192 3408905 CACAATCATCTCACCCGTG 58 NA Drosophila melanogaster 61 CG14270 FBgn0029665 FBtr0070590 3 1 1 60 X 3378927 3378946 GAAACTGCGTCTCCTTTCTC 59 3378886 3378905 CTCGTCGTATAGATCCACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3592 FBgn0029642 FBtr0070551 3 1 1 60 X 2829508 2829527 CATGGTATTGGGAATGGTGG 58 2829548 2829568 GATACTCTTCGCGAATATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17776 FBgn0040899 FBtr0070390 2 1 1 72 X 2079011 2079029 CGATTAACACCAACACGCT 58 2079065 2079083 TACAGGGTGACTCCAATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0070356 2 1 2 139 X 1795298 1795477 CAGGTCATGGCTTCAAATCTG 59 1795179 1795198 ATACAAGACCACCAGCTAGC 59 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 3 2 2 85 X 1266048 1266132 GATTAAAGGTGTCGTATGCTCG 59 1266178 1266196 GTTGATGTTTCGCGACAGG 59 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 2 2 2 84 X 1265800 1265960 ACTTCAAGACCGGATATAGCT 58 1266006 1266024 TTTAGCTTCTGGATGGCGT 59 NA Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070237 1 1 2 89 X 1240146 1240218 CAGTATTGCATCACTGGCT 57 1240075 1240093 AATGGTAAAGGTCAACGGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070169 1 1 3 95 X 830261 830279 GGCTACTACAGATGCTCCC 59 830407 830425 TTCTTGTTGCTGGTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Suv4-20 FBgn0025639 FBtr0070151 2 1 1 93 X 547469 547487 CATCCAGCGCATATACGAG 58 547263 547412 TCGGACGATATGATCGTGG 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 1 8 8 85 X 396182 396200 CAAACCGTTTGTGCTCTCC 59 396249 396333 ACTCATTGTGAGCCAAGGA 59 NA Drosophila melanogaster 61 CG17896 FBgn0023537 FBtr0070092 3 1 2 83 X 387427 387445 CCTAGTGCGATTGATCGGA 59 386603 386621 ATGAAGAGCTTGGTTGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328,FBtr0070077 2 2 2 71 X 373966 374071 GCGTGACTTTATTTGGTAATCG 58 374103 374121 TGAGGAACATCTGGCAGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13373 FBgn0029522 FBtr0112947,FBtr0070076 2 2 2 261 X 371712 371730 CATTGGTACAAGGCCAGGA 59 371952 372054 CGATTACCAAATAAAGTCACGC 58 NA DesignRelaxed Drosophila melanogaster 61 G9a FBgn0040372 FBtr0070063 3 1 1 81 X 146766 146785 CATCAGGACTACAGATTCCC 57 146826 147112 CGTAGTCAAAGCATATTTCCTC 57 NA Drosophila melanogaster 61 CG32850 FBgn0052850 FBtr0089123 1 1 1 80 4 337123 340080 GCCAGTGTATCATCAGGGA 58 340122 340142 GAAGATGGTGTTAGCGTTGTC 59 NA Drosophila melanogaster 61 ci FBgn0004859 FBtr0089178 2 1 1 80 4 72686 72705 TTCCCGGATACATGGAACAG 59 72563 72646 CACAATTGACATAGGGATCGTG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377a FBgn0086665 FBtr0091751 2 1 1 60 3R 26033523 26033542 TAATGGCAGCTTATCACTCC 57 26033482 26033502 GAAAGTAATGCAGTAACCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12063 FBgn0039851 FBtr0085790 1 1 1 103 3R 27328401 27328693 ATAACAGGGTACGTGCTATCG 59 27328758 27328776 CAAGATTCATTGGCCTGGC 59 NA Drosophila melanogaster 61 CG15555 FBgn0039839 FBtr0085764 3 1 1 104 3R 27092035 27092055 GATGTATCCCATTTGGAAGGT 57 27092121 27092202 TTGCCACTTAGATTGTGGG 57 NA Drosophila melanogaster 61 CG11318 FBgn0039818 FBtr0085739 3 1 1 85 3R 26933506 26933594 CAGGACTGAGAAGCAATTATCTC 59 26933443 26933461 AAAGGCCTTTGAATCCGGA 59 NA Drosophila melanogaster 61 PH4alphaSG1 FBgn0051014 FBtr0085686 2 1 1 86 3R 26329652 26329670 ACAATCTGCACAGTTCCAC 58 26329530 26329605 CATTGCAAATCCACTTTGATCC 58 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 3 3 3 80 3R 26184096 26184114 GCTATCCACTGGTTGATGG 58 26184157 26185710 GTCCCTCGTATTTAACCTCG 57 NA Drosophila melanogaster 61 Bet5 FBgn0260860 FBtr0085570 2 1 1 95 3R 26006359 26006529 TCCCTCTGGATTAAAGTTCGT 58 26006586 26006604 AACTCTACCCACACCTTGG 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595 2 1 3 69 3R 25865230 25865251 AAAGTATCTGGTCACATTGCTG 59 25865116 25865200 ATCAGTCGTAGTCCAACCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG2006 FBgn0039664 FBtr0085425 2 1 1 60 3R 25316151 25316169 GCAGTACGACAATCTGCTC 58 25316190 25316211 ATAGTACTTGTGGATGAGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1458 FBgn0062442 FBtr0085405 2 1 1 65 3R 25049001 25049019 TACTTGTCAAGTCTGCCGG 59 25048481 25048972 CCAATCCTTGAAGGAGAGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG1523 FBgn0039601 FBtr0085355 2 1 1 60 3R 24644524 24644543 AAAGATCTGTGCGGATTCAG 58 24644357 24644375 TATACTGTTCGCCCAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Acp98AB FBgn0013745 FBtr0089438 2 1 1 88 3R 23520632 23520650 CTGTTCTTAGCCGCATTGG 59 23520702 23520720 GCTGGTGATTCACTTGGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG34294 FBgn0085323 FBtr0112490 2 1 1 70 3R 23465821 23465839 ATATTGAGCCTGTCGAGGA 57 23465769 23465787 CTCTGAGTGCTTCGATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6295 FBgn0039471 FBtr0085077 3 1 1 68 3R 22832733 22832751 TGATGAAACTGTTCCTGGC 58 22832617 22832635 CATTCACACGAACCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 His2Av FBgn0001197 FBtr0085062 2 1 1 120 3R 22692805 22693136 TTGAACAGAAATGGCTGGC 59 22693402 22693420 GAGATGACGATGGATGCGA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 beat-VII FBgn0250908 FBtr0290328 3 1 1 104 3R 22492579 22492597 GCTGGTGAATCTAGTGGTG 57 22489408 22492512 AGCCATGTAACCTTGAACAG 58 NA Drosophila melanogaster 61 CG31323 FBgn0051323 FBtr0084988 3 1 1 97 3R 22009674 22009773 TTCATTCGAAGTGGCTACTG 58 22009830 22009851 GTTGAGTAGTTGTTGTGAAAGG 57 NA Drosophila melanogaster 61 CG6142 FBgn0039415 FBtr0084987 2 1 1 82 3R 21961898 21961978 CAGTTCCAAATTTGCAAAGGAC 59 21962021 21962039 TAGTGCCAAAGCGATCTCC 59 NA Drosophila melanogaster 61 CG31324 FBgn0051324 FBtr0084985 2 1 1 118 3R 21950270 21950288 CATTTCATCAGCATCCGCA 59 21950370 21954734 CTTTGGCCACATGGTTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5959 FBgn0039387 FBtr0084940 1 1 1 87 3R 21724926 21724944 ATCCCTTCCACATACACGG 59 21724995 21725080 AGCTCCTGAATATTGCGCA 59 NA Drosophila melanogaster 61 CG5948 FBgn0039386 FBtr0084939 3 1 1 87 3R 21721854 21722211 TACACCTATCAGTTGGTGCC 59 21722261 21722279 AGGATATCATTCCGGCCAC 59 NA Drosophila melanogaster 61 tankyrase FBgn0027508 FBtr0084890 3 1 1 82 3R 21480321 21480399 GCGAACAGTCTTATCCGGA 59 21480257 21480276 TCTTGTATCCTCCGTTCCAC 59 NA Drosophila melanogaster 61 CG11902 FBgn0028647 FBtr0300735 2 1 1 80 3R 21161709 21161728 AAGTCGTATCATCTACGTCG 57 21161769 21161840 TTCAGATGGCTTACATTCCTC 57 NA Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 1 1 1 63 3R 21088561 21088579 AAAGGATGCAGGGAAAGGT 59 21088606 21088683 CTTCTCCTTACCGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34150 FBgn0083986 FBtr0301004 2 1 1 127 3R 20640180 20640199 ATCGTAATGAAAGCAGCGAG 58 20640343 20640430 GATCCTTAGTTCATAAACACCATCC 59 NA Drosophila melanogaster 61 Rpb10 FBgn0039218 FBtr0084688 2 1 1 88 3R 20543422 20543523 AATACACCGAAGGAGATGC 57 20543575 20543593 TTCGATAAGATCCACGTGG 57 NA Drosophila melanogaster 61 CG31126 FBgn0051126 FBtr0084663 2 1 1 113 3R 20485573 20485591 AGGTCATTAACGAATCGCC 58 20485668 20485742 ATCGATGACGCTTGATGAG 57 NA Drosophila melanogaster 61 CG33340 FBgn0053340 FBtr0084611 2 1 1 60 3R 20189208 20189226 ATTCTGTGATCCCGACGAC 59 20189248 20189268 GTAGTAGATATCGTCGAAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6356 FBgn0039178 FBtr0084601 1 1 1 80 3R 20112385 20112403 GCCCAGGTTTCCATATCGT 59 20112445 20112529 GGATTTGCGACCAAATTTGTC 59 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084536 2 1 3 90 3R 19876649 19876669 CACAATTCCCGCTGATAAGAG 59 19877430 19877448 ATTGTTGCTTCCGTATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pros26.4 FBgn0015282 FBtr0084520 2 1 1 264 3R 19757072 19757090 AGTTCATCAAACGTTCGGC 59 19756765 19756784 CCTCCATCATCAGGTAATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 3 3 3 87 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688920 19691287 GCAAGTAACCATTGTAGCCG 59 NA Drosophila melanogaster 61 mbc FBgn0015513 FBtr0084459 1 1 1 80 3R 19620711 19620794 ATGTGCGCTTAAGCATATCC 58 19620835 19620855 TGCATCCCATCTTAGACTGAG 59 NA Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 1 2 2 92 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594239 19594257 TGTACTTGGTGGGATCGTC 59 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 2 1 1 254 3R 19586064 19586174 GCCGCAAATCTTGTTAAGTC 58 19585757 19585775 GGATGGAGCTATGAAGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 3 4 4 82 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 lmd FBgn0039039 FBtr0084364 1 1 1 83 3R 18848191 18849489 ACGATACGAAACCGTATGC 58 18848126 18848144 TCTTGACATGTTTGCGGAG 58 NA Drosophila melanogaster 61 CG4704 FBgn0039029 FBtr0084314 2 1 1 81 3R 18670518 18670536 CTGAAGTTTCTACACGCCC 58 18670399 18670473 AGATCACCGAACTGGACTC 58 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 2 2 2 106 3R 18523290 18523368 TCACCAAAGCTCAATTGGC 59 18523436 18523456 CAGTCTCTGCATAACATGCTC 59 NA Drosophila melanogaster 61 CG7045 FBgn0038978 FBtr0084258 2 1 1 60 3R 18317959 18317977 ACGACACCATGGATGACTC 59 18317999 18318019 CACCTGGTCTTTGATAAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5380 FBgn0038951 FBtr0084236 3 1 1 99 3R 18192501 18192519 ACCAAGAAGCTCATCAAGG 57 18192362 18192380 CTCCTCCCGTAATGGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34377 FBgn0085406 FBtr0112610 3 1 1 84 3R 18137788 18137871 CCATACAGAGACTAAAGACACAG 58 18137726 18137744 TTGTTCCGGTCATGAATGG 58 NA Drosophila melanogaster 61 dnd FBgn0038916 FBtr0084151 1 1 1 97 3R 17711940 17712021 GACATAACCACGGTAACGC 59 17711861 17711881 TTCCATTGACCACCAATATCC 58 NA Drosophila melanogaster 61 CG16791 FBgn0038881 FBtr0084095 1 1 1 91 3R 17160480 17163406 GTCGACGAGAAAGGATGTC 58 17160407 17160425 CTATCACCTTCGCACTCAC 58 NA Drosophila melanogaster 61 Snmp FBgn0260004 FBtr0084027 1 1 1 80 3R 16993567 16993585 ATCCGGATGAGGTATCCGA 59 16993439 16993524 ACTTGTCCTTCCACTCATCG 59 NA Drosophila melanogaster 61 CG7079 FBgn0038849 FBtr0084043 1 1 1 149 3R 16873953 16873972 ATATCCACTCTCAGGGAACG 58 16873753 16873841 ACATAATCCAGCGGTCCAG 59 NA Drosophila melanogaster 61 TotX FBgn0044810 FBtr0083985 3 1 1 63 3R 16730899 16730918 CTCAAGGAGGATCATTTGGA 57 16730855 16730873 ATATACCGGGTTCCGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 2 2 2 80 3R 16457020 16457242 ACACTTTCTGAAAGACGAAGAC 59 16456961 16456980 CTTTCCAGGTACGATTCGTG 58 NA Drosophila melanogaster 61 CG5466 FBgn0038815 FBtr0083913 2 1 1 125 3R 16445342 16445593 CTCCTTGCGTTCCAATCTG 58 16445681 16445700 ACTATCTTGTCCTGACCCAC 58 NA Drosophila melanogaster 61 Srp72 FBgn0038810 FBtr0083911 1 1 1 142 3R 16416359 16416377 GAAGTGGCTCCTGATCCAG 59 16416482 16416559 GACATGTCGTATTGATCGGC 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 3 1 2 84 3R 16405905 16405981 CAATTCGAACTTTATCCTGCG 58 16406027 16406113 ATATCGCTTGAACGTCAGC 58 NA Drosophila melanogaster 61 CG4936 FBgn0038768 FBtr0083831 1 1 1 84 3R 15858816 15858835 CATGTATCCCTCCCAGAGTC 59 15858882 15859058 ATGACCACAGATCTCGCAC 59 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 2 2 2 103 3R 15725672 15725690 AGGTGGACCTTACGTTCAC 59 15725522 15725608 CAGTTGTTCCATTATAGAGCGC 59 NA Drosophila melanogaster 61 CG17186 FBgn0038741 FBtr0083858 1 1 1 189 3R 15702995 15703074 CGAAATGGAATACTTGCACCT 59 15702826 15702844 CTCAGACTCGGAGTCAGAG 58 NA Drosophila melanogaster 61 CG11407 FBgn0038733 FBtr0083790 2 1 1 83 3R 15607725 15607800 CAGATCCTTAATTCCAGTCATTCC 59 15607842 15607860 AAGCAGACCCGTAATCCAG 59 NA Drosophila melanogaster 61 CG6013 FBgn0038675 FBtr0083714 3 1 1 147 3R 14857609 14857628 TAATCGAGGCGATAAACGAG 57 14857737 14857819 TCATTTACACTGAGCACCAC 58 NA Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 1 1 1 69 3R 14209940 14210046 CATTTGGATGGACGCAACC 59 14209889 14209907 TCGCTGTCGTACAAGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 repo FBgn0011701 FBtr0083564 1 1 1 114 3R 14063131 14063564 AAGAAGACGAGAACCACCT 58 14063642 14063660 GATTCAGCTTGATGGCCAG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0100378 3 1 7 141 3R 13793420 13793438 ACAACAACCTGAACAGCAG 58 13793543 13793561 CTGTCACTCACCTCTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 1 1 1 93 3R 13559515 13559618 TGAAATCACTTACCACGAACTG 59 13559672 13559690 GATGCAGTTGATCTTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7523 FBgn0038533 FBtr0083490 3 1 1 81 3R 13496057 13496140 GGGTCATCACATATCTCTTCGA 59 13495997 13496015 CGGTGAAAGTCGTGATAGC 58 NA Drosophila melanogaster 61 SF1 FBgn0025571 FBtr0083456 1 1 1 80 3R 13367454 13367472 ACCTTCATTCCTGGAATGC 57 13367513 13368147 TTGAAATTGAACTAGGTAGGCC 58 NA Drosophila melanogaster 61 CG34053 FBgn0054053 FBtr0113472 2 1 1 89 3R 13230407 13230425 GAATACCGGAGGTCGAGAC 59 13230279 13230354 GGTTCGTTGACATAGGCCT 59 NA Drosophila melanogaster 61 CG5255 FBgn0038485 FBtr0083406 2 1 1 89 3R 12964333 12964411 GATATCCAGATGCTCACGCT 59 12964463 12964481 TATCCTCAGAGCTGTCCGT 59 NA Drosophila melanogaster 61 CG31267 FBgn0051267 FBtr0083404 1 1 1 90 3R 12960060 12960079 AATTTAGCTCCCGAATCGTC 58 12960132 12960316 AAGTGGTTACCATAGGCGT 58 NA Drosophila melanogaster 61 CG10185 FBgn0038397 FBtr0083235 2 1 1 80 3R 11891832 11891945 TAACGCACAGAAATACACGG 58 11891771 11891792 AAATGATTCAGGTACTCCTCGT 59 NA Drosophila melanogaster 61 CG18522 FBgn0038347 FBtr0083154 1 1 1 80 3R 11361059 11361078 GAGGGAAAGATTATCCGTGG 57 11360776 11361018 GGGCATAATCTTGTAGGAGTC 58 NA Drosophila melanogaster 61 CG14867 FBgn0038333 FBtr0083095 1 1 1 146 3R 11206921 11206939 GATGCACCATCATCAGTCG 58 11207049 11207234 ATTTGTGCCAGGGTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG5073 FBgn0038331 FBtr0083094 1 1 1 80 3R 11198477 11198580 GACCATCAAGGAAATCGCC 59 11198622 11198642 GTTACGCCAGGTATAAACGAG 59 NA Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093 3 1 2 87 3R 11188187 11188205 TAAATTCGCTAGGCAGTGG 57 11188254 11188324 TTTAGACTGATGTAACCGCTG 58 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 3 2 2 146 3R 11143152 11143226 ATCGAGTGGATTACCTGGA 57 11143336 11143354 GGCTGTTGATGTAGTAGCA 57 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060,FBtr0083057,FBtr0083059,FBtr0083056,FBtr0083058,FBtr0083055 3 6 6 60 3R 11070947 11070965 AGGGTACCGACTTCTACAC 58 11070989 11071007 AGATCAGCGTTCAACTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smp-30 FBgn0038257 FBtr0083017,FBtr0083016 2 2 2 94 3R 10572067 10572143 CAAGGTCAATCCAAGCACC 59 10571991 10572010 TATCCAAATTGGGACCTCCA 58 NA Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 1 2 2 119 3R 10399020 10399040 TTGCCAAAGATTCTTCTGGTC 58 10398849 10398939 ATAGGACGCACTTGAAGGG 59 NA Drosophila melanogaster 61 CG8087 FBgn0038241 FBtr0082983 3 1 1 76 3R 10390389 10390407 CAGGATGCATTGACTGCAC 59 10390331 10390349 TGTACTGGTTGTATCGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 1 3 3 91 3R 9157364 9157629 GTTATGCTCAGGAATGCCG 59 9157291 9157310 GAACGCTCTCCAATATGCAG 59 NA Drosophila melanogaster 61 CG8141 FBgn0038125 FBtr0082734 1 1 1 130 3R 9017512 9017579 TCATGGCCTTCAAGGTGAG 59 9017672 9017691 GGTAGCGAAGTCTAGTTCCA 59 NA Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 1 1 1 60 3R 7707686 7707758 GGCGAAATTCGTTAGCCTG 59 7707644 7707667 GATGAGTTCTGCATAGAAACTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 3 4 4 80 3R 7614290 7614373 GAGTACTCAACAGGTAACTTCAC 58 7614411 7614431 GGTGTGGAACAAATGGTAACC 59 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100464 1 1 4 190 3R 7386919 7390172 AGCTGATCACCCTAATTCCC 59 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201 2 1 2 265 3R 6675694 6675712 AAACGGGAACAACATGTGC 59 6677205 6677284 CGCTGTGTACTAATCATGCT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 1 1 1 79 3R 6533639 6533657 GAGTTCAAGGGACGGATCC 59 6533507 6533596 ATAGTCAGTGGCAACTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14683 FBgn0037822 FBtr0100412,FBtr0082267 3 2 2 119 3R 6522460 6522480 GCGCAATATCAAAGATTCCTG 58 6523384 6523402 GCCCTCTAGACTTGTAAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12419 FBgn0037769 FBtr0082148 2 1 1 64 3R 5807738 5807756 GAACCACCATCATGCACAC 59 5807784 5807802 GTAGCCCTCGTAGTCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Snap24 FBgn0028401 FBtr0082163 2 1 1 73 3R 5588322 5588340 AAGAACTTGAGTGGCATGG 58 5588267 5588285 TCGTCCTTGATGTTCACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpt3R FBgn0037742 FBtr0301536 3 1 1 117 3R 5581284 5581350 AGCAAATTGGCATCGATCC 59 5581185 5581206 ACGACACGAATAAATGATGCAG 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 betaTub85D FBgn0003889 FBtr0082046 1 1 1 123 3R 5235416 5235434 ATTCCGTCTTGGATGTGGT 59 5235252 5235270 ATCTTCGAGATCAGCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 2 2 2 122 3R 5192793 5192813 CAGTGGCTATCCTAAGATTGG 58 5192897 5192979 GCACCACAACTTTCTTTCC 57 NA Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 2 2 2 97 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088725 5088805 TGATGGCAATCCTCAAACTC 58 NA Drosophila melanogaster 61 hb FBgn0001180 FBtr0081950 2 1 2 77 3R 4523066 4523085 AAATTCTCCCGCAGAATTGC 59 4519855 4519873 CTGTCGTCTCCCAGTTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tex FBgn0037569 FBtr0081861 3 1 1 81 3R 4134259 4134277 ATTGGAAGACCTGAAGTCG 57 4134141 4134214 GACCGAGTGAACCTTAGAC 57 NA Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 3 2 2 82 3R 4060875 4060893 TAAGCCAATATCCGTGCGT 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 1 2 2 83 3R 3833665 3833686 GTCAACACCAAGTTCTTAACGT 59 3833220 3833621 TTCCTCATCAGATGCCTGC 59 NA Drosophila melanogaster 61 CG18745 FBgn0042102 FBtr0081777 2 1 1 97 3R 3610828 3610904 ATCTGAGCAGCCAAGTATCC 59 3610750 3610768 GTGTGATCCCTCGAAGGAC 59 NA Drosophila melanogaster 61 alpha-Est8 FBgn0015576 FBtr0081553 2 1 1 87 3R 3336301 3336322 GTTTGGAAAGAAAGTACGAGAG 57 3335989 3336253 GTACGAGAAGAGATCGCTG 57 NA Drosophila melanogaster 61 CG34023 FBgn0054023 FBtr0100078 2 1 1 75 3R 3246062 3246086 GAGAGTTCTTATAAGGTATACCGTG 58 3246186 3246205 GATCACCAATGCTGACAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10068 FBgn0037473 FBtr0081611 1 1 1 104 3R 2953332 2953351 TACTTGACCTTGATGAGGCG 59 2953147 2953165 TGTTCTTGATGCGTTTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 3 1 1 86 3R 2886704 2886777 AAGAAATTCTCAAGCCCGA 57 2886824 2886845 TCTTGATCACATGAATCACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 1 4 5 82 3R 2582674 2583204 GACGCTACAGATCTTGGAG 57 2582610 2582628 TTATTCCGGTGCTCATGTC 57 NA Drosophila melanogaster 61 Ccp84Ae FBgn0004779 FBtr0081694 1 1 1 133 3R 2517286 2517424 TGGCAGCAAAGATTGTTATCG 59 2517173 2517191 AACCTCCTCCAACTCAACG 59 NA Drosophila melanogaster 61 agt FBgn0024912 FBtr0081697 2 1 1 60 3R 2485590 2485608 ATTCGAAAGACCAAGTCGC 58 2485548 2485571 GTACTCACATTGTCCTTAATCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15177 FBgn0037461 FBtr0081700 3 1 1 106 3R 2454463 2454481 ACACCGGAGTTATCGATCG 59 2454325 2454393 TTCAGTCATGTCCGCTCTG 59 NA Drosophila melanogaster 61 CG9727 FBgn0037445 FBtr0081730 2 1 1 184 3R 2280174 2280192 GAGGTGACTCTGAGTGCTG 59 2279953 2280028 TTTCAAAGGTCCAATGTCTGC 59 NA Drosophila melanogaster 61 Osi9 FBgn0037416 FBtr0078599 2 1 1 96 3R 2086255 2086335 GTCTTGTGCATGAAGGAGC 59 2086395 2086413 TCTCATCGGTCTTGACCAG 58 NA Drosophila melanogaster 61 Osi3 FBgn0037411 FBtr0078594 3 1 1 84 3R 2042473 2042492 GTGATGAACCATCTGTACCT 57 2042537 2043055 GTACCATTGAGATATTCCCGT 57 NA Drosophila melanogaster 61 Obp83g FBgn0046875 FBtr0078617 1 1 1 172 3R 1937951 1937969 AATGCAGTCCCAATCCCTC 59 1937734 1937754 CGTAGTTCAGGTACTTCTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Os-E FBgn0010403 FBtr0078655 2 1 1 82 3R 1802253 1802323 TACTGATGAGGCCATCAAGG 59 1802190 1802210 GGAAGAGGCAGTTCATATAGC 58 NA Drosophila melanogaster 61 CG10991 FBgn0037389 FBtr0078646 3 1 1 123 3R 1674782 1675005 TAACAGCGTCAGCATAAGTC 58 1675091 1675109 GTAATAGGACACTGCGTCG 58 NA Drosophila melanogaster 61 CG2104 FBgn0037365 FBtr0078726 3 1 1 60 3R 1518348 1518367 ACCTATTCCGTGAACTCGTC 59 1518307 1518328 CAAACTGAAACTTATCCAGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14673 FBgn0037352 FBtr0078738 1 1 1 92 3R 1452575 1453048 TGAAATTGAGCTACACCTGTG 58 1452503 1452521 TCTCTACGGACTCATCGGA 59 NA Drosophila melanogaster 61 Atu FBgn0019637 FBtr0078704 2 1 1 156 3R 1440188 1440307 CAGGATGTGGGAAAGAAAGC 59 1440426 1440444 TAGAACGACTGTGGGAGTG 58 NA Drosophila melanogaster 61 Snr1 FBgn0011715 FBtr0078682 1 1 1 92 3R 1297022 1297040 TGGATGATATCATGGCCGG 59 1297590 1297608 TCTTTGACTTGCTCTCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12147 FBgn0037325 FBtr0078793 3 1 1 60 3R 1252763 1252782 CATCCTCATGAGAAGGACCA 58 1252722 1252740 GTAGGGATTGCTTCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2022 FBgn0037292 FBtr0301312 3 1 1 84 3R 814175 814274 GATGAAGTGCCTTAGGTTCAG 58 814111 814129 CATAACGCTGGCCAATCTG 59 NA Drosophila melanogaster 61 Mur82C FBgn0037260 FBtr0078930 3 1 1 61 3R 368734 368752 TTACCAATTGGTCCACCTG 57 368776 368795 AATGTATCCGCCTCTATTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568,FBtr0112567 3 2 2 105 3R 363605 363623 GTTGATTTGACGCATGTGC 58 360239 363536 CGCTTAAGTCCACATCACG 59 NA Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078955 2 1 2 120 3R 159037 159055 AACTCGTTTCCACCTCAGG 59 158873 158954 GACCGTACACATTTACGTCC 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070044 2 1 3 207 3L 23092788 23092806 CGTAACCACGTACACTGGT 59 23095374 23095393 ATTGACATCTGTGTACACGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32461 FBgn0052461 FBtr0078567 1 1 1 60 3L 22947879 22947898 GTGCTTCCAATAAGACTCCC 58 22947838 22947858 CTTCGGCTTATACCACAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078563,FBtr0078561 3 2 2 156 3L 22939656 22943635 CATCAGAGAACGAAAGGGC 58 22943752 22943773 GGACTCGTTAAAGGAATTGGAC 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG33771 FBgn0053771 FBtr0290251 2 1 1 63 3L 22642542 22642560 AAACCGAAATTGTCGTCGG 59 22642627 22642646 CTGTTGCCGGTAACAAACTC 59 NA DesignNoJunction Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493,FBtr0078494 1 3 3 85 3L 22262584 22262689 CTGATAAGTTCAAGGAAGTCAACC 59 22262733 22262751 CAAAGAGCCGTAGTTGTCG 59 NA Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 3 2 2 113 3L 21959322 21959341 CAATTGTCCGCTTGGATGAG 59 21959413 21960243 CGTCGAAGAAGATGTTAGTTTCC 59 NA Drosophila melanogaster 61 CG7634 FBgn0037101 FBtr0078371 3 1 1 85 3L 21560463 21560547 CCGAAAGTCTATTGAAGAGGC 58 21560591 21560612 CAGCATTCGCCTTTATTATCAG 58 NA Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078384 3 1 2 268 3L 21526277 21526750 AAACGACAAAGTCATCAGGT 57 21526028 21526046 TTGTACTAGGCTTCGGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 3 3 3 81 3L 21257016 21257035 ATCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078250,FBtr0078247 1 2 4 80 3L 20769086 20769104 AATTCTTGCAGATGCTGCC 59 20769143 20769286 GAGTTCCCAATTCCTTAAAGATCC 59 NA Drosophila melanogaster 61 CG13252 FBgn0037016 FBtr0078245 2 1 1 99 3L 20730563 20735699 AACGACACTTGACCAGGAG 59 20735762 20735780 ATGGCGTATGGAACTGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14182 FBgn0036922 FBtr0074913 3 1 1 62 3L 19972765 19972783 ACTGGATCATCACGGAGTC 58 19972653 19972671 TCATGCAGGTCCACATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32219 FBgn0052219 FBtr0074914 3 1 1 141 3L 19944027 19944113 TCATAATCATTCGGCTGTCGA 59 19943906 19943924 ACTTTCCTCATCCGATGCA 59 NA Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 1 1 1 70 3L 19530153 19530171 TAACTCAACATGCCGTCCT 59 19530205 19530285 ATATCGAGGATGGGCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9619 FBgn0036862 FBtr0075014 1 1 1 60 3L 19278195 19278336 CTTGGGATCACAGACAACC 58 19278153 19278173 ATTTATGATCGGCTCATCCTC 57 NA DesignRelaxed Drosophila melanogaster 61 not FBgn0013717 FBtr0290259 1 1 1 96 3L 18613423 18613444 GCGATTACTTTATGTCAGATCG 57 18613281 18613369 GAATAGAACTCCTGGAAGAGAC 57 NA Drosophila melanogaster 61 CG14353 FBgn0036771 FBtr0075144 2 1 1 136 3L 17901621 17901696 CAAGTTCTGGATATGGAGCA 57 17901795 17901813 TCACGACTTCCAGTAACGA 58 NA Drosophila melanogaster 61 CG5577 FBgn0036759 FBtr0075162 2 1 1 174 3L 17833079 17833152 CTTATGATTGGTGACTGCCTC 58 17832925 17832943 AAATGTTCAGCAGATCGCC 58 NA Drosophila melanogaster 61 NUCB1 FBgn0052190 FBtr0075171 2 1 1 89 3L 17795020 17795039 CCTGAGTTCCGTAAGAAGCT 59 17792611 17792629 ATGGTGGTTCACGTAGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Jon74E FBgn0023197 FBtr0075207 3 1 1 85 3L 17541552 17541657 GAATGACGAATCCACTGCA 58 17541485 17541505 CGTAGGAGTATTCACAGTCCT 58 NA Drosophila melanogaster 61 CG13733 FBgn0036729 FBtr0075225 2 1 1 60 3L 17471797 17471816 CAACATCGTAAGTATCGGCA 58 17471756 17471774 GGATCTCCTGTTCCATACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6497 FBgn0036704 FBtr0075250 2 1 1 60 3L 17246336 17246357 CTACTACAAGCTGATCATCGAC 58 17246297 17246315 CTTGGCGTTGAACAGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-tyr FBgn0027080 FBtr0075410 3 1 1 189 3L 16411637 16411718 TCATGAATCCCATGGTTCCC 59 16411467 16411485 TTGAACAGCGAGAACAGGA 59 NA Drosophila melanogaster 61 CG4680 FBgn0036627 FBtr0075388 1 1 1 60 3L 16388488 16388507 ATCAATAGAAAGCTCACGCA 57 16388530 16388548 TGATGCGCTCTATGTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13058 FBgn0036610 FBtr0075372 3 1 1 208 3L 16321973 16322079 CATCACGGTTGTTTGCCTC 59 16322247 16322269 CCTGGTGATGATTAACAATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13040 FBgn0036608 FBtr0075431 3 1 1 158 3L 16318781 16318865 TTCCGCTTCATTGCTATCTG 58 16318642 16318660 GTACTGGGTGAAGCTCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13059 FBgn0036607 FBtr0075371 3 1 1 84 3L 16316831 16316914 ATGTTCAAATTCGTCGCCT 58 16316962 16316980 GGACAATCGAGTGGGTCTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13063 FBgn0036601 FBtr0075366 2 1 1 72 3L 16299750 16299831 TTCAAATTGGTGGTGTTGTC 57 16299863 16299884 GAGGAGACTCATAAAGATGACC 57 NA DesignRelaxed Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 3 1 1 117 3L 16225421 16225496 AATTAACAGCTTGGTGACCG 58 16225575 16225594 CTGAGGATTCTTGTCTTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG5235 FBgn0036565 FBtr0075497 3 1 1 109 3L 16082942 16082962 AACTACGATGTCCTAGATGGC 59 16082798 16082871 AACGTATCAGCGGAGAGTG 59 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 2 2 2 60 3L 16017000 16017019 AATGGATTAAGCCACAGCAG 58 16022392 16022411 TGACTGAACGTGGCTAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33260 FBgn0053260 FBtr0302436 1 1 1 92 3L 14754817 14754893 AACGTGGATGATTACATGGA 57 14754744 14754762 TTGATTAGGACTCCAGCCT 57 NA Drosophila melanogaster 61 CG13473 FBgn0036442 FBtr0075689 1 1 1 60 3L 14722118 14722138 TGTTGGTCCTTAAGATTGACG 58 14722160 14722178 TTGACTTCGTACTGAACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13479 FBgn0040811 FBtr0075721 3 1 1 72 3L 14561068 14561086 AGAACCAGGAAGGATCCAG 58 14561014 14561032 TCCTGCTGTGGGATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Leucokinin FBgn0028418 FBtr0075722 2 1 1 63 3L 14553775 14553793 TTGGCCGTCAAGTCTATGG 59 14553730 14553748 AACTCGGGATCCTGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ptip FBgn0052133 FBtr0075784 2 1 1 80 3L 14018400 14018421 CAACAACAGCAGATTATTGGTC 58 14018267 14018361 CTGAACTCCAGAAATTTGCTG 57 NA Drosophila melanogaster 61 CG9007 FBgn0036398 FBtr0075768 2 1 1 99 3L 14003676 14003803 TTGGTCAGCAAATTGCTCG 59 14003864 14003884 CCAGGATCAATATCTGTGCTG 58 NA Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075815 2 1 2 89 3L 13644663 13644682 TCCATTAATACCACCAGCCA 58 13595564 13631622 CGATCTAAATGCTCGCTGC 59 NA Drosophila melanogaster 61 CG10083 FBgn0036372 FBtr0075819 1 1 1 90 3L 13478007 13478025 ATTGATTGGCTCTCGTGTG 58 13477873 13477956 CGGTTGCGTATTTAGTTTAGAC 57 NA Drosophila melanogaster 61 CG14106 FBgn0260459 FBtr0075858 2 1 1 60 3L 13418064 13418083 GTGGATGTTAACCCAGACGA 59 13418023 13418041 GTAGCTCTGCACAGGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nplp2 FBgn0040813 FBtr0075839 3 1 1 98 3L 13349866 13349886 CCTGCCCAAGAATTTCTTACC 59 13349945 13350119 CTTGAAGAGACCCTCAACCT 59 NA Drosophila melanogaster 61 CG32109 FBgn0052109 FBtr0075918 2 1 1 80 3L 12739274 12739292 ACTACGAGGAAGTTGTGGA 58 12739334 12739414 TGATTTCCTCCTTGTGATCAG 57 NA Drosophila melanogaster 61 tral FBgn0041775 FBtr0075959 1 1 1 259 3L 12511920 12511938 CAATTATCGCATGGGTGGC 59 12512161 12512252 ACTATTGTGAAACTGCCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG10418 FBgn0036277 FBtr0075954 1 1 1 80 3L 12329935 12330017 AAACGACCTCAGCATATGTG 58 12330059 12330078 TCTGTGACACTGATATCCGT 58 NA Drosophila melanogaster 61 prc FBgn0028573 FBtr0076064 1 1 1 80 3L 11953482 11953564 GGAACATCGAGCTTTGGTG 59 11953420 11953438 CCTGTAAGTAGCAACCTGC 58 NA Drosophila melanogaster 61 CG10907 FBgn0036207 FBtr0076029 2 1 1 60 3L 11788087 11788164 CCGAAGGGACAGTCAAGAG 59 11788188 11788206 GTTTCGTTCGGAACTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG32088 FBgn0052088 FBtr0076116 3 1 1 80 3L 11721547 11721621 GGTAACACGGAAACAGTGG 58 11721665 11721683 CACAATCCAGTTATCCGGG 58 NA Drosophila melanogaster 61 CG32088 FBgn0052088 FBtr0076116 1 1 1 80 3L 11722055 11722149 CAGAATGTCTTTCAGCATCCT 58 11722190 11722209 CAAATTCCCTTAAAGCCCGA 58 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 3 3 3 93 3L 11681178 11681257 TGCTACCATGCAGAGTCTG 59 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359,FBtr0076090 2 2 2 60 3L 11466707 11466725 TCATTGCGATCTATGGCCT 59 11466748 11466767 TACGAATCCGACAGAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 2 3 3 94 3L 11168040 11168058 TGATGATTGTCACCCTGCT 59 11168116 11168196 AGGAACCGCATAGCTACTC 59 NA Drosophila melanogaster 61 CG33493 FBgn0053493 FBtr0089606 2 1 1 72 3L 10685988 10686006 CACATGGAACACAATCGGG 59 10685934 10685957 GTCTTATAGTCATGGTGTAGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34238 FBgn0085267 FBtr0112432 3 1 1 91 3L 10619700 10619718 GGCCTATGCTATAGGATGC 57 10619772 10619858 TTAGCCAACTTAGGTGTTCG 58 NA Drosophila melanogaster 61 CG6674 FBgn0036063 FBtr0076354 3 1 1 144 3L 9964692 9964771 ATTACCAGGTAAACCCGCA 59 9964566 9964584 GGAGATTCGTTATCGACGC 58 NA Drosophila melanogaster 61 CG34356 FBgn0085385 FBtr0112566 3 1 1 80 3L 9947529 9947547 CCGAAGATTGTGCAGAACG 59 9947590 9947670 AACCTCATCCATGACCTGTG 59 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416,FBtr0076415 2 2 2 82 3L 9677545 9677629 AAATCCAGTGCATTGATGTCTC 59 9677484 9677505 GAAGAGATACGAGACACTCTCG 59 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 3 5 5 81 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408555 9410758 GGCATGAATTATCTCGGCC 58 NA Drosophila melanogaster 61 Hsp27 FBgn0001226 FBtr0076454 3 1 1 72 3L 9377669 9377687 GATCCAGCGTCACTTTGTG 59 9377723 9377741 GACAGTGGACACTACCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34455 FBgn0085484 FBtr0112761 1 1 1 60 3L 9353833 9353851 GGCTATGTGGGAAACAAGG 58 9353946 9353964 GATCCACATCGAAACCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5280 FBgn0035952 FBtr0076552 3 1 1 179 3L 8982909 8983036 GATCCGATTGCTTGTCAAGG 59 8982749 8982767 TTCTTACGCTTGGCATTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32023 FBgn0052023 FBtr0076588 3 1 1 61 3L 8797259 8797277 TGCAGTATACTCAGCTCCT 57 8797160 8797183 GACTGCCATATAGGATATGATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Cp16 FBgn0000356 FBtr0076574 1 1 1 94 3L 8725414 8725568 CGATCCAGTCTTCAAGAAGAG 58 8725624 8725642 CTTAGATGGCCACAACACC 58 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 1 2 2 92 3L 8669374 8669392 AACATGACCAACGTTCTGG 58 8669448 8670489 CATGATGGGCTTGTTCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 3 2 2 139 3L 8642727 8642813 GCTAGCTACAAGCCAACTG 58 8642916 8642934 ACAATCCATCGGACCACTC 59 NA Drosophila melanogaster 61 CG32355 FBgn0052355 FBtr0076632 3 1 1 60 3L 8591442 8591460 GGTTTGTTGCCACTACCTC 58 8591482 8591502 AGGACTGAAGGTACTCAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CdsA FBgn0010350 FBtr0076688 2 1 1 80 3L 8122636 8122722 CTTGATGATCACGACGTTACTG 59 8122760 8122781 TGAATTCGATAAACCTGGTAGC 58 NA Drosophila melanogaster 61 CG8209 FBgn0035830 FBtr0076753 1 1 1 101 3L 7969667 7969780 GAACGTGTTGAATATGCACTG 58 7969843 7969861 TTGACGGGATGGTATTGGA 58 NA Drosophila melanogaster 61 Srp9 FBgn0035827 FBtr0076750 3 1 1 80 3L 7929701 7929784 ACGGACAACGTTAAGTGTG 58 7929826 7929846 CAAGTTGCTGGTGATCTTCTC 59 NA Drosophila melanogaster 61 CG8492 FBgn0035813 FBtr0076813 3 1 1 83 3L 7722387 7722406 GAGCCCATCTAAGTCCACTC 59 7721841 7722342 TTGGACGAGTAGTTGGACTC 59 NA Drosophila melanogaster 61 CG12262 FBgn0035811 FBtr0076808 1 1 1 155 3L 7712546 7713166 TTCCTCAACAAGCTTGCTG 58 7713285 7713303 CTCACGGGTGAACTTACGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691 1 2 3 80 3L 7323268 7323289 ATGAAGAGAAGTCCACTGAGAG 59 7323327 7323407 ATTTATAATCTTCCTTGGCGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34030 FBgn0054030 FBtr0100085 1 1 1 81 3L 7067987 7068007 GCCATATTCCTTCTCATTCGA 58 7067837 7067946 GACAGTAAGCTACAATGGAGC 58 NA Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0300937,FBtr0076940 1 2 2 174 3L 6948257 6948488 ATGAACATGTACAACGGACAG 58 6948103 6948122 CATTGAAACCTGGGTATGGG 58 NA InUTR Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 2 2 2 84 3L 6734856 6734876 TGGGAGATACCGTGTATTTCG 59 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 3 3 3 81 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609818 6609836 GCGCTTTGAAGATGTCCAG 59 NA Drosophila melanogaster 61 Sfp65A FBgn0259969 FBtr0300314 1 1 1 60 3L 6343462 6343481 ATCAGAAAGATGACAGTGCC 58 6343502 6343522 GTGTTTACCGTTATAGCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10163 FBgn0035697 FBtr0077009 1 1 1 84 3L 6250836 6250911 TTCATGGAGGCTCTCATCG 59 6250770 6250788 AATTACAATCGCCCTGTCG 58 NA Drosophila melanogaster 61 D19A FBgn0022935 FBtr0077016 1 1 1 210 3L 6181317 6181335 TCAGATGACTCCGAAGACG 58 6181064 6181145 TAGTGAAACCTTTCTTGCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 Lcp65Ag1 FBgn0020638 FBtr0077058 2 1 1 60 3L 6128129 6128210 AAAGCTTCAAATACGACTGGG 59 6128089 6128107 AGCTGACCTACAGCTTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6610 FBgn0035675 FBtr0077048 3 1 1 120 3L 6068776 6068868 CTAATGCCATTGGAATTGGTG 58 6068947 6068968 CCAAGAGCATATTCACAAAGTC 57 NA Drosophila melanogaster 61 yip7 FBgn0040060 FBtr0077038 2 1 1 71 3L 6028556 6028574 ATCATCGGAAACGAGTGGG 59 6028664 6028683 GTAGTAGATGGTCACGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5568 FBgn0035641 FBtr0077025 1 1 1 80 3L 5864858 5864934 CTGCCCAGATTTCAGTTACAG 59 5864974 5864994 TATAACTTGCCACCTTCATCG 58 NA Drosophila melanogaster 61 CG32235 FBgn0047330 FBtr0073355 1 1 1 170 3L 4860199 4860283 GCAATTAATTGTGGACAACGC 59 4860049 4860067 TACGGGAACCTGAATCCTG 58 NA InUTR Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302 2 1 2 134 3L 4447465 4447483 CAGATTGTCCAGAGGGCTC 59 4447577 4447909 GATGGTTTCGTTATAGACTGGAC 59 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 2 4 4 94 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289164 4289257 TAAACCAAGTCATCCGAGCT 59 NA InUTR Drosophila melanogaster 61 CG1273 FBgn0035522 FBtr0073231 2 1 1 93 3L 4274012 4274030 GCTGCATTTATCGTCCTGC 59 4274087 4274168 CCATGACAGGATCCTCCAG 59 NA Drosophila melanogaster 61 CG1309 FBgn0035519 FBtr0073229 3 1 1 80 3L 4260247 4260373 CCAGAAACTTATGAGACCCA 57 4260416 4260434 TTAACCTTGTAGCGGATGC 57 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 3 3 3 92 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247503 4247522 AACATCAAAGTCGAGGACCA 59 NA Drosophila melanogaster 61 CG1332 FBgn0035514 FBtr0073224 1 1 1 80 3L 4219278 4219296 AACACTGAAGCCCATTGGA 59 4219337 4222203 AATGCAATGTGACCATGATAGG 59 NA Drosophila melanogaster 61 Cpr64Ac FBgn0035512 FBtr0073252 1 1 1 80 3L 4212794 4212874 CATGATTGCCCAGACTCTG 58 4212732 4212753 GAAAGTCCATAGGGATCAATGG 58 NA InUTR Drosophila melanogaster 61 CG32266 FBgn0052266 FBtr0073147 3 1 1 246 3L 3790806 3790825 CAATCAGCGGATATACCACC 58 3791265 3791283 TAGGGATAGGCTCCGTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073186,FBtr0073188,FBtr0073187 1 5 5 106 3L 3722938 3722956 ATGTTCTCCACTCCGAGTC 58 3722513 3722870 GGATCGTTATCATCGTAGTCG 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204,FBtr0290290 1 2 2 102 3L 3613116 3613134 GGAGCTGATGACCAATCTG 58 3613197 3613761 CAGCTGATCCAATTTCTTATCG 57 NA Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 1 2 2 100 3L 3185486 3185504 GATTCGATATTTGGCGGCC 59 3185567 3185642 ATGGAACTCCGTCATAGCAG 59 NA Drosophila melanogaster 61 CG16976 FBgn0035366 FBtr0300098 2 1 1 125 3L 2666643 2666890 ATTCTGCCGAAATGTGGAG 58 2666536 2666554 GTAGCGAACCATCAAGGTG 58 NA Drosophila melanogaster 61 CG14949 FBgn0035358 FBtr0072949 2 1 1 110 3L 2642874 2643203 CAAGAATCTCTATGTGGTCAAGG 59 2642786 2642804 TAGAAGGTCAGATCCACGC 58 NA Drosophila melanogaster 61 CG1139 FBgn0035300 FBtr0072845 3 1 1 100 3L 1973623 1973641 GGCTTGTATGTTCTGCTCG 59 1973704 1973780 TGAGCGGGTATTTCAGACTG 59 NA Drosophila melanogaster 61 Mfap1 FBgn0035294 FBtr0072841 1 1 1 130 3L 1942228 1942308 AACGTGATAACGTCGAACG 58 1942402 1942420 CTTGTACTTGCCCTTGGTG 58 NA Drosophila melanogaster 61 R FBgn0004636 FBtr0072867 2 1 1 195 3L 1861667 1862069 AAAGCATAGTGTGCTCTCG 58 1861490 1861508 TTTGTGCCGTGTAAGTGAC 58 NA InUTR Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072832 3 1 2 122 3L 1857293 1857311 AAGATGTTCCCGGACATCG 59 1857395 1857476 CAGTTTCTCGTTCTGGTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 2 2 2 136 3L 1821294 1821312 CAACACAGGACCCATAGCA 59 1821411 1821817 GCAACACGTAGACATAGGGA 59 NA Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 3 2 2 106 3L 1476660 1476678 GTATACGCTTTGCTAGCCG 58 1476513 1476590 TCGAAGGAAACGAAGACCA 59 NA Drosophila melanogaster 61 l(3)02640 FBgn0010786 FBtr0072679 1 1 1 80 3L 1336000 1337274 GCAGAAATTCGAGATCCACAC 60 1337314 1337334 CTCTTCTCGCCAATCTTAGGA 59 NA Drosophila melanogaster 61 CG32335 FBgn0063667 FBtr0273416 1 1 1 65 3L 1202913 1202931 CTTTGAGGAGAGGCCACTC 59 1202782 1202884 AGAGCACCCTGTATGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 3 2 2 111 3L 987333 987351 GAACTACGGCACCAATCTG 58 987426 988753 GGAACGAACAATCCTTCCG 58 NA Drosophila melanogaster 61 CG13905 FBgn0035176 FBtr0289973 3 1 1 60 3L 903364 903383 AACTGATCCGATCCTTTCTG 57 903406 903424 AGTTCCGACAGTTGAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13905 FBgn0035176 FBtr0289973 1 1 1 60 3L 902990 903008 TGGTCAGAATGGAACCCTC 59 903032 903050 AATCACCGACTTCAGCTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rev1 FBgn0035150 FBtr0072557 2 1 1 86 3L 656216 656296 TTGGCTTACGAGCAGATCC 60 656346 656364 AAATTGTTCGCACTCGACC 59 NA Drosophila melanogaster 61 CG34268 FBgn0085297 FBtr0112463 1 1 1 144 3L 501025 501106 ATGTTCCGCATTATCGCTG 58 501214 501232 CTGGAACATGCTTCACCAC 59 NA InUTR Drosophila melanogaster 61 Tudor-SN FBgn0035121 FBtr0072519 3 1 1 81 3L 259903 260318 ACAAGGAGACACTTCCGAC 59 259840 259858 GCATACTCCGTAGCGTAGG 59 NA Drosophila melanogaster 61 thoc7 FBgn0035110 FBtr0072527,FBtr0072526 1 2 2 80 3L 212488 212509 GATCGGAGAATAGTAGTGTTGC 58 212364 212448 GTCGTACATGATGGGATTGC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-841d FBgn0083016 FBtr0113524 1 1 1 60 2R 17218437 17218456 AACTAGCTTCGTGTGATGAC 58 17218479 17218497 TGGATAAGACGCATCTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-G2703a FBgn0082931 FBtr0113508 1 1 1 60 2R 10511044 10511064 ATCTCAGGATTCCCTCTTCTG 58 10511086 10511104 ACAGGGAAAGTGAACAGCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33358 FBgn0053358 FBtr0086350 1 1 1 60 2R 15651888 15651906 ATACATCGGTTCTCGTCCG 59 15651846 15651864 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33360 FBgn0053360 FBtr0086352 1 1 1 60 2R 15651143 15651161 ATACATCGGTTCTCGTCCG 59 15651101 15651119 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33400 FBgn0053400 FBtr0086392 1 1 1 60 2R 15636373 15636391 ATACATCGGTTCTCGTCCG 59 15636331 15636349 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33427 FBgn0053427 FBtr0086419 1 1 1 60 2R 15626417 15626435 ATACATCGGTTCTCGTCCG 59 15626375 15626393 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33435 FBgn0053435 FBtr0086427 1 1 1 60 2R 15623478 15623496 ATACATCGGTTCTCGTCCG 59 15623436 15623454 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30257 FBgn0050257 FBtr0088131 1 1 1 60 2R 7281860 7281878 CTCTTTAGCTCAGTGGCAG 58 7281902 7281920 TGAGGATTGAACTCACGAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg1 FBgn0045800 FBtr0086842 1 1 1 80 2R 13587389 13587591 CGCTTACGGCAAAGATAGAC 59 13587633 13587652 AGTCCGACATTACAGATCCC 59 NA Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0072453 2 1 2 84 2R 21073905 21073926 GGTTCGATTATCGTAAACACCA 58 21073791 21073862 CCTGAGTATAAGTTGCCTGTG 58 NA Drosophila melanogaster 61 CG4781 FBgn0035043 FBtr0072335 3 1 1 60 2R 20529465 20529483 CCACTGTACATCGACTCCC 59 20529423 20529442 TGAAGATCGGTACTGAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3548 FBgn0035033 FBtr0072315 2 1 1 154 2R 20487771 20487789 CTCCCTTAACTGGGAGGAG 58 20487906 20488000 AGTTAAGGGCATTGAACTGC 58 NA Drosophila melanogaster 61 Ir60b FBgn0259185 FBtr0299669 2 1 1 60 2R 20403569 20403587 CCCACCATACTATTCGTCC 57 20403611 20403629 GCAGACACTCCAGAAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13581 FBgn0035014 FBtr0072300 3 1 1 61 2R 20394821 20394839 TTATACTGTGACCAGCCGC 59 20394864 20394882 ACAGATGGTACAGGAAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SerT FBgn0010414 FBtr0072362 2 1 1 122 2R 20294901 20294976 GGAGTTCTTTGAGCGAAAGG 59 20294798 20294816 AGGGAGAAGTAGACCAGGA 58 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 1 2 2 104 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183363 20183439 TGGAAAGCCTTTAGGTCCC 59 NA Drosophila melanogaster 61 eIF-5A FBgn0034967 FBtr0072172,FBtr0072173 2 2 2 80 2R 19946586 19946604 ACTTGAAGGTTCCAGAGGG 59 19946648 19946728 GAACGGTGCACAGTAAGTC 58 NA Drosophila melanogaster 61 CG30172 FBgn0050172 FBtr0072193 3 1 1 135 2R 19918362 19918506 ACTTCAACTCAAAGCTGCC 58 19918245 19918263 TAGAAGCATGGCCCATACG 59 NA Drosophila melanogaster 61 CG3105 FBgn0034950 FBtr0072160 1 1 1 80 2R 19879126 19879204 GCGTTAATGAAGCCAAGCA 59 19879248 19879266 CGTGGTTACTCACTGAGGT 59 NA Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 2 2 2 115 2R 19868163 19868181 CGGCCATGAAATGACACTG 59 19868260 19871076 GTTTCTTGGTTCGAGTCGC 59 NA Drosophila melanogaster 61 thoc5 FBgn0034939 FBtr0072147 2 1 1 81 2R 19843447 19843468 GGAAATGCCTCTATGGATTCTG 59 19843510 19843584 CTCCATCATCTTGATCGCC 58 NA Drosophila melanogaster 61 ken FBgn0011236 FBtr0072129 2 1 1 91 2R 19762610 19762686 TTGATAAGGAACCTGCTGGAG 59 19762737 19762757 AGGAACTTAAAGTAGGTGGCA 59 NA Drosophila melanogaster 61 CG11300 FBgn0034901 FBtr0072090 2 1 1 76 2R 19639867 19639889 CAACCAGAGTAATCAGAATGGAG 59 19639925 19639943 ACAATAGACGACGGTGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18128 FBgn0034898 FBtr0072094 1 1 1 60 2R 19606527 19606546 GCCTTTGTGGTTATCAGCAG 59 19606486 19606504 TGTCCTTATCGCTCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 3 3 3 81 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619490 19619574 ACATCGTTGTACAATCCGTC 58 NA Drosophila melanogaster 61 l(2)not FBgn0011297 FBtr0072095 2 1 1 76 2R 19596953 19596971 CCAACTACAGTCTGTTGCG 58 19594245 19594265 GAGAGCCGAGTAGATGTACAC 59 NA DesignNoJunction Drosophila melanogaster 61 alphaPS5 FBgn0034880 FBtr0072063 3 1 1 93 2R 19447513 19447583 ATCCTCTACAAGCTTCGGT 58 19447640 19447658 TTGCAGGTTCTTTCGTCTC 58 NA Drosophila melanogaster 61 CG9863 FBgn0034846 FBtr0290285 3 1 1 66 2R 19234767 19234785 GATAAGTTCGAACCGAGCA 57 19234814 19234833 GTTCCATAGAGAAGGTGAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30269 FBgn0050269 FBtr0071867 2 1 1 91 2R 18555812 18556163 CCTGTTCCAGTTGTACTGC 58 18556218 18556236 AATAACGATCGCACATGCC 59 NA Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 2 3 3 86 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608827 17609375 TAGGCGATGATACCTCGGA 59 NA Drosophila melanogaster 61 CG30289 FBgn0050289 FBtr0071697 2 1 1 81 2R 17408614 17408695 GTGGAGTACTCAGATTATGTTAGG 58 17408556 17408575 CGGTAACCGTAAACATTGGA 58 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350,FBtr0071604,FBtr0071602,FBtr0071603 1 4 4 99 2R 17212598 17212616 TCACTAGTCAGTGGCATCG 59 17212676 17212915 GAACTTGAGATTGCGTATTCGT 59 NA Drosophila melanogaster 61 Cht4 FBgn0022700 FBtr0071543 1 1 1 86 2R 16953856 16953932 GATTAAGGAGACCTACGATCAG 57 16953791 16953809 ATGTCGTATGAGATGCTGG 57 NA Drosophila melanogaster 61 CG9993 FBgn0034553 FBtr0071560 3 1 1 102 2R 16739278 16739297 AGAACACCACCTATCTCACC 58 16739137 16739213 ATATAGGCCGTGGTTTCCG 59 NA Drosophila melanogaster 61 CG13438 FBgn0034545 FBtr0086237 1 1 1 62 2R 16580429 16580447 TTTACTGTCGGCCTAGAGG 58 16580550 16580568 TCTCAGTTCCCTTCCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13424 FBgn0034520 FBtr0086218 3 1 1 94 2R 16445657 16445675 GAAACGGAGTTCGAAAGGG 58 16445730 16445907 CAGATCTTGATCTGCGTTTCTG 59 NA Drosophila melanogaster 61 CG11192 FBgn0034507 FBtr0290122 2 1 1 60 2R 16242363 16242381 ATCGACACCGTACTGACAG 59 16242321 16242339 TGTAATCTGCACTGCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr56F FBgn0034499 FBtr0086301 1 1 1 280 2R 16179342 16179361 TCCCAAACAAGTGACAACAC 59 16176765 16176783 AGCACCATATTGACCCTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11788 FBgn0034495 FBtr0086277 2 1 1 95 2R 16163347 16163365 CTGCCCACCAATATAAGCG 58 16163422 16163500 GGTAAAGCACTCTATGTACGG 58 NA Drosophila melanogaster 61 CG11208 FBgn0034488 FBtr0086322 3 1 1 86 2R 16130605 16130686 TACCCAAATCACACCACCA 58 16130537 16130555 CAGAAGTAGCCCTTCATGC 58 NA Drosophila melanogaster 61 Obp56f FBgn0043533 FBtr0086328 2 1 1 174 2R 15600951 15600969 ATCTCTGCTATCTGGCTCC 58 15601158 15601179 CAATAACACCTTTCACTTCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 Obp56e FBgn0034471 FBtr0086327 3 1 1 98 2R 15599930 15599948 TTGCAGCTCTATCTTTGGC 58 15600066 15600084 TGATTCCCTCCTGTTTGAC 57 NA DesignNoJunction Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473,FBtr0086474 2 2 2 104 2R 15559347 15559425 CAGTCGAATATCCAATACGATGTG 59 15559488 15559506 CATAGCTATCAGGCGTGGA 59 NA Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 3 2 3 187 2R 14664325 14664413 TTCTTACACCAACAGACATGTC 58 14664159 14664177 GAAGACATGCAGCTTGTGG 59 NA InUTR Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 2 3 8 82 2R 14311923 14311941 CATCACCGTCTGGAAGGAG 59 14311986 14312390 CAGTGCGTTGGTATACAGTG 59 NA Drosophila melanogaster 61 Pcl FBgn0003044 FBtr0086735 1 1 1 80 2R 14025077 14025095 CTGCAAATGTCGGAACTGG 59 14025139 14025212 ACAAAGAACATATCGCCGC 59 NA Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086796 1 1 5 72 2R 13738942 13738960 CCTTCCTCACAGAACCAGG 59 13742672 13742693 CGACGACGTATATTCAAATTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299707,FBtr0300541,FBtr0300540,FBtr0299706 2 7 7 96 2R 13722164 13723261 AAAGGGAGTTAAGGGCCTG 59 13723320 13723339 CTTTATCTGACAGTAGCCGC 58 NA Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 1 3 3 81 2R 13563331 13563423 CGAAATCCAGGCCATTAGTC 58 13563269 13563287 GGCATTCACAGAGGTTGTG 59 NA Drosophila melanogaster 61 CG18186 FBgn0034255 FBtr0086896 1 1 1 60 2R 13521536 13521557 ACATAGTGGAGAAGTTTCTAGG 57 13521497 13521515 TTGGTCAGATACTGAGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rhi FBgn0004400 FBtr0086897 2 1 1 89 2R 13519521 13519539 AGGAAGCGTATCCATTGCA 59 13516244 13519469 TGTACAAACCCGGTACTAGG 58 NA InUTR Drosophila melanogaster 61 POSH FBgn0040294 FBtr0086828 3 1 1 115 2R 13456672 13456759 AATGCTTGCAGGACATTGTG 59 13456835 13456855 TAAGATTCGCATCAGCAAGAC 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 1 5 5 172 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400427 13400445 CTCAGAGTGGGTCAGATCG 59 NA Drosophila melanogaster 61 veil FBgn0034225 FBtr0086926 1 1 1 80 2R 13368438 13368529 GATTCATGTTCAGTTTGATGCC 58 13368569 13368588 TGAGCTACAGAGGCATTCAG 59 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086921 3 1 2 112 2R 13345283 13345301 GATTGGAGAGCCCAATCAG 58 13345377 13349516 TTGTCGACGTCGATTTACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10764 FBgn0034221 FBtr0086919 1 1 1 80 2R 13341611 13341631 ACTTCATTGCATCGGAATACC 58 13341670 13341743 GTTGAACTCGAACTGTGTAGAC 59 NA Drosophila melanogaster 61 Sip1 FBgn0010620 FBtr0086909 1 1 1 118 2R 13282524 13291407 TTTAAGCGAAGTCAAGATGTCC 59 13291486 13291504 CATAGCCATCGAAATCGGG 58 NA InUTR Drosophila melanogaster 61 CG17290 FBgn0034201 FBtr0086989 1 1 1 66 2R 13042246 13042361 CATGAAATTCCTGATCATTGCC 58 13042388 13042406 AGAAAGCTCCGAGACATCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 3 2 2 116 2R 12976598 12976616 GCTACTTCAGTGATTGCCC 58 12976441 12976518 CAGGTGGATACCAGATGGA 58 NA Drosophila melanogaster 61 CG34190 FBgn0085219 FBtr0112383 1 1 1 60 2R 12834883 12834901 AGGCACATAATGGTACGGA 58 12834841 12834862 TACTCATCATTCCTTTACCCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 3 2 2 80 2R 12544692 12544784 TCGGGATATTCCTATTGATGACTC 59 12544635 12544654 AAGGACGACAAGATGTAGCC 59 NA Drosophila melanogaster 61 CG5089 FBgn0034144 FBtr0087107 2 1 1 60 2R 12487014 12487034 CTAATACCTCCGGCATTACCT 59 12487053 12487074 TCCTCCTCAATATACGTTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30098 FBgn0050098 FBtr0087168 3 1 1 156 2R 12242644 12242664 TGGATATTCGCAGCTATTGGA 59 12242446 12242526 TAGAACAAAGCGGTAGGCA 59 NA Drosophila melanogaster 61 CG30324 FBgn0050324 FBtr0087181 2 1 1 60 2R 12175289 12175311 CGGAGTATCCATCGTACTATCTC 59 12175251 12175273 GGCAACTCGTAGAATTTCTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7755 FBgn0034105 FBtr0087182 1 1 1 60 2R 12169437 12169455 ATCGCTGACCAATTATGCC 58 12169395 12169413 GAGATCCACAATGGTGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fidipidine FBgn0025519 FBtr0087185 1 1 1 81 2R 12151406 12151482 GCTAGTTAAGACCTCTGTGGA 59 12151345 12151364 GTGATTATGAAACTGGCCGA 58 NA Drosophila melanogaster 61 CG3687 FBgn0034097 FBtr0087132 2 1 1 109 2R 12124511 12124529 CACATTCTGGAGATGCTGG 58 12124657 12124677 GTAATGAAGCGTATGAATCCC 57 NA DesignNoJunction Drosophila melanogaster 61 shark FBgn0015295 FBtr0087244 2 1 1 88 2R 12087837 12087858 CAGTACATACTGGATCATGGTC 58 12087711 12087788 AGATAATGCATGCCACACG 58 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114473 3 1 3 111 2R 12083979 12083998 GTTCGACCAACACTAGTTGC 59 12084072 12086002 CAGTGCCGGAAATCTTCTG 58 NA Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 1 2 2 137 2R 12083326 12083344 ACAATGCGCTACTTTCCAC 58 12083148 12083226 CCTGTACATCGTGACATCCA 59 NA Drosophila melanogaster 61 CG33461 FBgn0053461 FBtr0302528 2 1 1 81 2R 11583433 11583453 AGGTTATACGATCCCAAGGAC 59 11583491 11583576 GGATATGATATGTGTACTCAACCC 58 NA Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 2 1 1 69 2R 11461004 11461022 GGAACCTACGCTTCATGTG 58 11460895 11460973 TTCTAGTTGCTGGAGCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp51a FBgn0043530 FBtr0087420 2 1 1 150 2R 10912202 10912290 GCTTTATTCGAATCTGAAGCGA 59 10912073 10912091 GTGTTACCACACCATTGGC 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 1 4 4 145 2R 10757800 10758425 GTCGAAACATAGCAACTGC 57 10757673 10757691 TTGACAGATACTCCTCGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12869 FBgn0033943 FBtr0087496 1 1 1 99 2R 10480376 10480463 ATCTCATTGGGCTCAAGGT 58 10480525 10480544 AATCGTAGTTCGTTGATGGG 58 NA Drosophila melanogaster 61 Arc2 FBgn0033928 FBtr0087547 3 1 1 65 2R 10249867 10249886 CCACTAAACCTTCCTACCAG 57 10249914 10249932 TCACTTCGTCGTAGGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6701 FBgn0033889 FBtr0087607 3 1 1 83 2R 9861906 9862104 TCAAGCGAAAGAACCATGC 59 9861841 9861859 CATTCCCGAGGTTAAGCAG 58 NA Drosophila melanogaster 61 CG30485 FBgn0050485 FBtr0087640 1 1 1 60 2R 9738412 9738432 CATCAAGGGCACAAACTATGG 59 9738454 9738472 CTCACTACTGGTCACTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 2 2 2 80 2R 9391985 9392004 GTTACTCAGTGGCGAATTCG 59 9392045 9392122 CTCCAGTGTCTTCTTTAACCG 58 NA Drosophila melanogaster 61 CG4744 FBgn0033834 FBtr0087717 3 1 1 104 2R 9283157 9283175 GTCTCCAAAGAAGCCACAC 58 9282998 9283016 TATTTCAATCCGAGGTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087747 1 1 2 60 2R 9144494 9144513 GAAACAACTACGGAGCACAC 59 9144536 9144554 ATCGCACCATCGTATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 3 2 2 80 2R 8887544 8887658 CGGAACTTATAAGCTTATCCCTG 58 8887698 8887716 AAATAGTGGGAGGCACCTC 59 NA Drosophila melanogaster 61 Dgkepsilon FBgn0020930 FBtr0087853 3 1 1 86 2R 8646779 8646797 TTTCCACATTGCCCAACTG 59 8646846 8646920 GTCTCCTTGACTTGTAGCCT 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 3 6 6 155 2R 8548085 8548104 GAGAACAAGACCTACAGCTG 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 s-cup FBgn0050044 FBtr0113358 2 1 2 187 2R 8383682 8383700 AATGTGAATCTGCTGCTCG 58 8385929 8387473 GAAGTCTCGTAGCACTGCT 59 NA Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087933 3 1 2 175 2R 8341397 8341415 GAAGTGAAGCTATCGGTGC 58 8341553 8351857 TAGGTGGCACTATCAGTTGG 59 NA Drosophila melanogaster 61 CG30203 FBgn0050203 FBtr0273303 3 1 1 88 2R 8199347 8199365 CAATTGTACGTGGCTGGAG 58 8199414 8199482 CATCTGAGGACATATACGATGG 58 NA Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 3 1 1 283 2R 8112748 8113225 GTACAATGGCTTTGGAGGC 59 8112483 8112505 AAGCATAGGGATTACAGTAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 2 2 2 104 2R 7540580 7565722 TTCAAGTTATGGATTCCTGCC 58 7540496 7540514 GAAAGGAGTGGTTGCACTC 58 NA Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 3 2 2 80 2R 7511397 7511476 AGGGAGAAAGTTCCTCCAC 58 7511335 7511357 TATCTGGGAGAAGTACAACTGAC 59 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 3 2 2 92 2R 7344227 7344315 TGTTTACCTACCGACTCGA 57 7344371 7344389 TTAGCATCCGAACAAGCAC 58 NA Drosophila melanogaster 61 CG34227 FBgn0085256 FBtr0112420 3 1 1 63 2R 7135698 7135716 TCTAACACTTCTGGCCCTC 58 7135742 7135761 AGAATCATCCAAGGCGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS15Ab FBgn0033555 FBtr0088226 3 1 1 115 2R 6709307 6709325 CAAATCCAGCTATGGTGCG 59 6709404 6709422 GATGATCACCTTGGAGCAG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 RpS15Ab FBgn0033555 FBtr0088226 1 1 1 113 2R 6709616 6709634 GTTACGTTGTGCTCACCAC 59 6709710 6709729 CGATGTGAACTTGGTGTCTC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088396 2 1 2 124 2R 5938139 5938157 GGCTTGGATAGTCCAATGC 58 5938244 5938319 TCATCCTTGGGATCATTGGT 58 NA InUTR Drosophila melanogaster 61 eve FBgn0000606 FBtr0088390 1 1 1 160 2R 5867051 5867142 GCCAAATGAATGCCTATCCAG 59 5867264 5867282 GACGGGACACGTAGTTCTC 59 NA Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 1 2 2 84 2R 5763389 5763409 ACGATTATAAGCTGGATCCCA 58 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 RpL31 FBgn0025286 FBtr0088526,FBtr0088527,FBtr0088525 3 3 3 102 2R 5475199 5475287 CCAAGGGTATCAGGTCCAC 59 5475351 5475371 TAGGTCACGTAAGTGTACAGC 59 NA Drosophila melanogaster 61 Or45a FBgn0033404 FBtr0088503 1 1 1 154 2R 5233866 5233884 GCACAAGCCGTTTATGGTC 59 5234001 5234074 GTTCTGATGACCCAAAGCAG 59 NA Drosophila melanogaster 61 CG8777 FBgn0033376 FBtr0088565 3 1 1 84 2R 4990140 4990221 CTACATCCTGATAAATGAGGGTG 58 4990265 4990283 CAGACTTCGGGAATTGGGA 59 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 2 2 2 80 2R 4909359 4909482 TAACATTGCTTTCAGGGACC 58 4909298 4909316 TGCAGACTGTAGTCATTGC 57 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643,FBtr0088642 1 2 2 83 2R 4782911 4782935 CTACATCTGGTACTTTATTAAGGCG 59 4782976 4783052 TCGTCTTTGTTGTAGCCCA 59 NA Drosophila melanogaster 61 CG30371 FBgn0050371 FBtr0088798 3 1 1 143 2R 4156310 4156328 CTGTAATTGTGGCTGGTCG 58 4155964 4156203 TAACGATGGGCCACTATGG 59 NA Drosophila melanogaster 61 CG14757 FBgn0033274 FBtr0088805 1 1 1 80 2R 4060864 4060993 CAACTACGGTTGACAATGGA 58 4060803 4060822 AGGAGAGTCCTTCATGTTGG 59 NA Drosophila melanogaster 61 slv FBgn0025469 FBtr0088824 3 1 1 128 2R 3968880 3968898 TTACCGTCAACAAACGTGC 59 3968703 3968788 ACACAATTCCTGTGACGTG 58 NA Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 3 2 2 81 2R 3942532 3943248 CCTATCAAACAGGAGCCCA 59 3942469 3942487 GTTCTGTATCGCTGCTTGG 59 NA Drosophila melanogaster 61 Odc2 FBgn0013308 FBtr0088864 1 1 1 80 2R 3895783 3895863 GATGAGATGTTCGAGGAAATAGC 59 3895900 3895921 AATGATTCGGATACGCTTATCG 58 NA Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 3 2 2 119 2R 3715846 3715926 TCTACCAAGTGGAGTACGC 58 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG2064 FBgn0033205 FBtr0088923 2 1 1 80 2R 3554128 3554202 TACTGAAGAACTCGGCTCC 58 3554246 3554264 GGTCGGCTACGTTAATGGA 59 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 1 1 1 102 2R 3399275 3399349 AAAGCTGGTGTTCACAGAG 58 3399191 3399209 ATTGCAGAAGTGCTTGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Inos FBgn0025885 FBtr0089329 3 1 1 111 2R 3343264 3343348 CTCCAAGGAGATTTCCAAGAG 58 3343173 3343191 GGGCACGTACTTGATTACC 58 NA Drosophila melanogaster 61 Tsp42Ep FBgn0033137 FBtr0089062 1 1 1 86 2R 2944908 2944988 TCTATATGCTACTCGGCATAGG 58 2944843 2944861 AATAAGTGTGCTCTGGCGT 59 NA Drosophila melanogaster 61 CG30157 FBgn0050157 FBtr0086186 3 1 1 123 2R 2861885 2861903 GAGAAGTACCAAGGCTTCG 58 2861718 2861798 CTACGAAATGCGGATCCAC 58 NA Drosophila melanogaster 61 CG3267 FBgn0042083 FBtr0086126 1 1 1 104 2R 2635619 2635695 AATATTACTGGCTTCATGGTGG 58 2635760 2635778 GAACTTGGGCACATTAGCG 59 NA Drosophila melanogaster 61 CG3270 FBgn0033093 FBtr0086123 1 1 1 125 2R 2581048 2581066 TGATAATAGGTGGCGGTGG 59 2581155 2581482 TAGATGCGCTGGTGTAACC 59 NA Drosophila melanogaster 61 CG30432 FBgn0050432 FBtr0086002 1 1 1 60 2R 2085641 2085662 GGTTGGGATTATATGTTTGGTG 57 2085602 2085620 GTCATTGAGACGATAGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 1 2 2 80 2R 1896789 1896808 TACGGTTAAGCATTATCGCA 57 1896851 1896936 TGAAGGGTTCTGAATGTCG 57 NA Drosophila melanogaster 61 l(2)NC136 FBgn0033029 FBtr0086062 3 1 1 82 2R 1548243 1548322 ACACAATACATCACTCCTGGA 58 1548181 1548199 CTCCTACGATAGCTGCCAC 59 NA Drosophila melanogaster 61 snRNA:U4:39B FBgn0003930 FBtr0081489 3 1 1 100 2L 21215151 21215169 CAGTGGCAATACCGTAACC 58 21215069 21215087 TGGACGGTATTTCACGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 3 3 4 98 2L 22141683 22141702 GATTGTAAGCCTAGATCGCC 58 22141760 22141846 ACAGCATCGATATCCTTAATCG 58 NA Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942,FBtr0085941 1 2 2 60 2L 22129299 22129319 GCAAGTAGAGCATCCTTACAC 58 22129259 22129277 CTGGTCGCCTTTGAAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8665 FBgn0032945 FBtr0081517 2 1 1 112 2L 21376166 21376184 GTGATATGGACAAAGCCGT 57 21376676 21376694 AAATTCGTCGTGTATCCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG9253 FBgn0032919 FBtr0081468 2 1 1 82 2L 21143494 21143575 GAAAGATCTCGGTCTCAATGAG 58 21143618 21143636 CCTCACGTTGGATCTTCGA 59 NA Drosophila melanogaster 61 CG31674 FBgn0051674 FBtr0081423 3 1 1 81 2L 20832395 20832415 TGCTGGACTAGATGTTATGGA 58 20832456 20832675 AGGAGTAACCACAACATTGTC 58 NA Drosophila melanogaster 61 Sfp38D FBgn0261058 FBtr0301938 2 1 1 103 2L 20640973 20641058 ATTGGCTACATACTTGGCAC 58 20641124 20641142 GGATTGCTAAGAGCTTGCA 58 NA Drosophila melanogaster 61 bwa FBgn0045064 FBtr0081331 2 1 1 94 2L 20069437 20069455 GAAGCCCATTGTTAACGCC 59 20069512 20072370 CCCTCTGGTCACTAACTCTC 59 NA Drosophila melanogaster 61 Hf FBgn0014000 FBtr0081306 3 1 1 191 2L 19967503 19967584 TTATCTGTCTGGCTCTGGC 59 19967330 19967348 CGAGCTCCTCGAAGTACTG 59 NA Drosophila melanogaster 61 CG13962 FBgn0032824 FBtr0081314 3 1 1 163 2L 19814403 19814481 CTGCTGTAAGCCTTTCGTG 59 19814258 19814276 TTGTTCAAGCGGAACTGTG 59 NA InUTR Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211,FBtr0081213,FBtr0081212,FBtr0081210 1 5 6 80 2L 19409456 19409474 TGCATCAGGCCTATACGTC 59 19404673 19409413 CGTTGCTAACCTTGAAGTCG 59 NA Drosophila melanogaster 61 robl37BC FBgn0028569 FBtr0081139 1 1 1 261 2L 19011009 19011027 CTGTGCAGATGACCTTCGA 59 19011252 19011270 AGAATGATCGTGTGCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31793 FBgn0051793 FBtr0081138 2 1 1 80 2L 19006227 19006247 CTGATAATGCTGTGTATTGGC 57 19006289 19006366 AGCTGTGTTCTTAACCCAG 57 NA Drosophila melanogaster 61 CG10431 FBgn0032730 FBtr0081134 2 1 1 60 2L 18974806 18974825 CAGCCATAAGTATGTGCACG 59 18974845 18974923 CTTCCGTTTGAATGGAAATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 3 2 2 90 2L 18836780 18836798 ATTCTCTGGATCCGTGCTG 59 18836645 18836729 CATTAATACGAGTCCTTTGCCT 58 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 1 2 2 93 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699093 18699114 GCTTGTGTTGACTCATTTACCA 59 NA Drosophila melanogaster 61 CG42627 FBgn0261350 FBtr0302268 3 1 1 81 2L 18672281 18672352 GAGGGCAGTAGTTTGACTG 57 18672218 18672240 GCATTAGTCTCTGATCCATACAG 58 NA Drosophila melanogaster 61 CG31786 FBgn0051786 FBtr0300069 2 1 1 92 2L 18210622 18210640 GCATAACAAGTCAGCGGAG 59 18210140 18210566 AGGAACCTACTGAAGTGGC 59 NA Drosophila melanogaster 61 CG6870 FBgn0032652 FBtr0080989 3 1 1 60 2L 17592079 17592097 GACGAACCTCTTGCAATCG 59 17592037 17592059 CTGATTACTGGACTTTCCATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6453 FBgn0032643 FBtr0080998 3 1 1 139 2L 17483265 17483283 GCCGCGTATTAAGTCTCTG 58 17483079 17483162 GTTCAGCTTGTTCTTCGCT 58 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 1 2 2 80 2L 17383513 17383531 CAAGCTGAAGGACTTTCCC 58 17374730 17383472 AATCTATTCCGGGAAAGATCTG 57 NA Drosophila melanogaster 61 CG6012 FBgn0032615 FBtr0080923 2 1 1 124 2L 16860593 16860681 CCATACTTGTAAACAACGTTGG 58 16860490 16860508 GAAGAAGATGCGAGACAGC 58 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940,FBtr0080942 1 3 3 84 2L 16724283 16724301 ATGCCATCATCCTTTCCGT 59 16724157 16724235 AGTTGTTCCAAGACGTGCT 59 NA Drosophila melanogaster 61 CG4455 FBgn0028506 FBtr0080836 2 1 1 171 2L 16353102 16353120 GCAGTTCGTACCTGTTGTG 59 16353333 16353351 AATGTGGAGATTCCGGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 nht FBgn0041103 FBtr0300021 3 1 1 60 2L 15318171 15318191 ATGTACTGCAGTTTATGGAGG 57 15318131 15318149 GCTTCGAAGAGCATGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3975 FBgn0027559 FBtr0080713 1 1 1 60 2L 15256130 15256148 AGGCCTACATCAAAGAGCA 58 15256088 15256110 CCATGGACTAGAAATCTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33648 FBgn0053648 FBtr0091625 3 1 1 87 2L 14524980 14525054 GACGTAAGTATAGTTGAGTTCACC 59 14525097 14525118 CCGATTTAATACGGCAACTCTC 59 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 1 2 2 80 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164181 14164202 TCTCCAGTGTATCAGAATCCAG 59 NA Drosophila melanogaster 61 nimA FBgn0261514 FBtr0299659 1 1 1 80 2L 13961888 13961906 AAACTTCCACGAACCACTG 58 13961950 13962135 TATAGCTCTGGTTGTGCCT 58 NA Drosophila melanogaster 61 CG33306 FBgn0053306 FBtr0080564 1 1 1 60 2L 13843630 13843648 AAGTTGCCGAACCTTTGTC 59 13843533 13843551 AATCCGTCCACAATTACGC 58 NA DesignNoJunction Drosophila melanogaster 61 mRpS23 FBgn0260407 FBtr0080566 1 1 1 80 2L 13834876 13834951 CAATCTTCACCAGAGTTCAGG 58 13834816 13834836 CGTACACATCGTACCAAATGG 59 NA Drosophila melanogaster 61 TM9SF4 FBgn0028541 FBtr0080532 3 1 1 108 2L 13773315 13773394 CTATACGGGTCTTATGGTGC 57 13773464 13773483 TTAGTCGATCTTCACAGCTC 57 NA Drosophila melanogaster 61 TM9SF4 FBgn0028541 FBtr0080532 2 1 1 107 2L 13773315 13773395 CTATACGGGTCTTATGGTGCT 59 13773463 13773482 TAGTCGATCTTCACAGCTCC 59 NA Drosophila melanogaster 61 ics FBgn0028546 FBtr0080511 3 1 1 88 2L 13640471 13641117 CGGACTGTTCAACATGTCC 58 13640401 13640419 TCAGTAGGTTCGCGATTCC 59 NA Drosophila melanogaster 61 CG16850 FBgn0032527 FBtr0080505 3 1 1 141 2L 13475337 13475355 GATTGGCATCCGATCATGC 59 13475460 13475478 GATTGCGTCGTATAGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16956 FBgn0032523 FBtr0080520 1 1 1 101 2L 13414391 13414465 CAGTTGGGACAAGTACCGT 59 13414308 13414326 GAAGTCAGGAGCTACCGAG 59 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220,FBtr0080497 1 3 3 80 2L 13382774 13382901 ACCGCGATTCAAACATACAC 59 13382944 13382962 CCGTGGAAATTCTCCTGGT 59 NA InUTR Drosophila melanogaster 61 CG6523 FBgn0032509 FBtr0080465 1 1 1 90 2L 13366987 13367008 GATGATATTCATGAAGGGCGAC 59 13367059 13367140 GTACGGCAAGTTGGTTTCG 59 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 3 1 2 146 2L 12678863 12678881 ACACAAACACAGCAATCGG 59 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Nonspecific Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0080346,FBtr0300567 3 5 5 120 2L 12298741 12298823 ATTAAAGTGACCCTGAGCC 57 12298907 12298925 GATTGGCCTGAATTTGCTG 57 NA Drosophila melanogaster 61 CG6583 FBgn0032420 FBtr0080358 1 1 1 123 2L 12171918 12172128 GAGGATTCATCTGGGACGG 59 12171813 12171831 CACTCCTCCCAGTACACTC 58 NA Drosophila melanogaster 61 CG17217 FBgn0032419 FBtr0080341 1 1 1 81 2L 12170882 12170963 GATCTATATCGCAAATGGTATGGAC 60 12171002 12171020 GTTCATCCTCGGAATTGCC 59 NA Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0110911 2 1 2 99 2L 12096637 12096707 GCCTTTAATTATGCCCAATTGG 58 12096764 12096785 CCAAATTACTGCCGTAATTGTG 58 NA Drosophila melanogaster 61 CG32830 FBgn0052830 FBtr0080205 2 1 1 105 2L 11254613 11254631 CTAATCCGGCAATGGTTCC 58 11254699 11255471 GGAATGTGCAGAATCGAGTG 59 NA Drosophila melanogaster 61 CG16854 FBgn0032338 FBtr0080194 2 1 1 60 2L 11090129 11090147 CGACTGAAGGATAGCTCAC 57 11090171 11090189 TCAGAGCCTGGAGTATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16854 FBgn0032338 FBtr0080194 1 1 1 60 2L 11090119 11090139 GATCAATAACCGACTGAAGGA 57 11090158 11090179 GAGTATGGAGTTCAGGTATAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 1 3 3 167 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG6729 FBgn0032296 FBtr0080119 2 1 1 62 2L 10742593 10742613 GACGAGAGCTTGAACTATGAG 58 10742499 10742517 CTTCTTTAGGCCCAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5188 FBgn0032247 FBtr0080024 2 1 1 88 2L 10428921 10428996 AAGTTAAGGGAGATACTGGCA 59 10429046 10429064 TTTCTTGATCTCCTCGGGC 60 NA Drosophila melanogaster 61 CG5045 FBgn0032229 FBtr0080000 2 1 1 108 2L 10356948 10357022 ATTAGTTCAGTACAATGTGGCG 59 10357091 10357109 AGAATATGTCGTAGGCCCG 59 NA Drosophila melanogaster 61 CG42367 FBgn0259713 FBtr0299966 3 1 1 124 2L 9930627 9930707 TGAATGTCCTGCATTCCAG 57 9930795 9930813 GTGGAACTCATATTGGGCA 57 NA Drosophila melanogaster 61 CG13123 FBgn0032150 FBtr0079917 3 1 1 88 2L 9792936 9792954 ATATACGGGAGCACAGGAG 58 9792813 9792886 ATTAAGTGCTATGTTCCAGCC 58 NA Drosophila melanogaster 61 CG31609 FBgn0051609 FBtr0299873 3 1 1 89 2L 9097665 9097686 GTATCCAGTAGTAGCAGTTGTC 58 9097793 9097812 AAATCATCACAGGGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Toll-4 FBgn0032095 FBtr0079768 2 1 1 101 2L 9085520 9086255 GATGGGAGACATTAACTGTTCC 58 9086317 9086335 GCTATTGAGCATGTTCCGT 58 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664 1 1 4 81 2L 8428059 8428329 CAAATTGAGGCCAGCAGTG 59 8428374 8428392 CCTTGATGATTGCTGCCAC 59 NA Drosophila melanogaster 61 CG31900 FBgn0051900 FBtr0079580 2 1 1 81 2L 8157878 8157896 ACGGAAACGGTTTACTCCA 59 8157940 8158027 GCAGGCTTAATCTGGTAGGA 59 NA Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0079532 3 1 2 115 2L 7999160 7999262 CAAACAAGTGAGCTATCTATCG 57 7999338 7999356 GGAAGGCCATTAGCTTCTC 58 NA Drosophila melanogaster 61 TwdlE FBgn0031957 FBtr0079563 2 1 1 168 2L 7860817 7860835 CATGCAGTAAGAGGTTCCG 58 7860586 7860685 CCATGAGGACCACTAACAC 57 NA InUTR Drosophila melanogaster 61 CG33296 FBgn0053296 FBtr0302519 3 1 1 80 2L 7716205 7716398 TATCGGCTTTGTTGGTATGC 58 7716144 7716163 ATGAAGGAATGAACGACCAG 58 NA Drosophila melanogaster 61 CG13791 FBgn0031923 FBtr0079521 2 1 1 60 2L 7578289 7578307 AGGCAATTGCAATACCAGC 59 7578247 7578270 CTGTCAGCATATCTATATTCTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smt3 FBgn0026170 FBtr0079356 2 1 1 80 2L 6967381 6967522 ATTTGAGGAAATCAGCACGC 59 6967320 6967339 GTTGAAGCTGCTAAGTGGTC 59 NA InUTR Drosophila melanogaster 61 CG11188 FBgn0031851 FBtr0079299 1 1 1 120 2L 6718979 6718997 GAGCGAGATTACCAAGCAG 58 6719143 6719161 GATGAGCTTGTTGTGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 mtm FBgn0025742 FBtr0079223 2 1 1 90 2L 6035336 6035355 TAACCATCGTGGATCATCTG 57 6035210 6035283 TTGTGCTTGAGATCTTCGG 57 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 3 3 3 106 2L 5947158 5947244 GGTCTGGAGGACAAATTCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 3 2 2 82 2L 5845882 5845900 CTTTGATCGCACCGATGTG 59 5845942 5848353 CAAGGAGGTTACCAAAGAAACAG 59 NA Drosophila melanogaster 61 CG14040 FBgn0031676 FBtr0079009 1 1 1 85 2L 5053094 5053112 ATTGGCGTGAATTGTTCCC 59 5053161 5053249 GACAAAGATGCCCTGTCCT 60 NA Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079046 1 1 2 267 2L 4981395 4981415 GTGTGAATATCGTTGTTTCGC 58 4981095 4981113 TATTTGGCCTCGTCCATGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL24 FBgn0031651 FBtr0079058 3 1 1 92 2L 4944855 4944935 AACCAATTGAGGACTGGAG 57 4944781 4944799 TAACCTGGGTGACAATTCC 57 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 1 4 4 82 2L 4845307 4845325 AACCGACCAAGATTCCTGG 59 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 CG15630 FBgn0031627 FBtr0077418 3 1 1 115 2L 4737141 4737161 AAGGTAACACAGAATGACACC 58 4736328 4737064 CAAATGGGCTTGTGTTCGA 59 NA Drosophila melanogaster 61 CG15631 FBgn0031626 FBtr0077419 2 1 1 106 2L 4734384 4734403 TAGTCAGAACTCGAACCAGC 59 4734246 4734318 TATTGTATTCCGGATCTGAGCT 59 NA Drosophila melanogaster 61 CG15635 FBgn0031617 FBtr0300354 1 1 1 60 2L 4643960 4643980 CAGGAATATACCCTCCATCCA 59 4644002 4644020 CCACCTTGACTTAGTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071,FBtr0077434 3 2 2 82 2L 4401280 4401358 TTCCGAGGACCTTCAACTC 59 4401404 4401422 TGGACTTGTCGTGGATGTC 59 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077484,FBtr0077485 3 2 2 112 2L 4187745 4187766 GGCAACATTTGTTATTGTGAGC 59 4187443 4187461 TCGAGGATTTGATCCTTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sfp24C1 FBgn0259956 FBtr0300302 2 1 1 86 2L 3700751 3700828 GGATATGGAAATTCTGTCTGCA 59 3700871 3700893 GGAAGCTACGAAAGTAAATCCTC 59 NA Drosophila melanogaster 61 CG16712 FBgn0031561 FBtr0077546 3 1 1 100 2L 3696461 3696541 CTCAAGGATCCTATCTGTGGA 58 3696381 3696401 TTGGTTTCGGGATGATAACTG 58 NA Drosophila melanogaster 61 CG8838 FBgn0031526 FBtr0077588 1 1 1 60 2L 3358229 3358247 TTCCACTCAGTTGAAGCGA 59 3358268 3358289 ATCCTTAGCTGTAGATTCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Chd1 FBgn0250786 FBtr0077674 3 1 1 84 2L 2980568 2980648 AATCCCGCGATAGATACAGC 59 2980503 2980521 TGATAGCTGCCTTGACCTC 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG31950 FBgn0051950 FBtr0077630 1 1 1 68 2L 2878691 2878709 GAACGATGCCAGTTTGACG 59 2878741 2878759 ACGATCCGAAGAACTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 2 4 4 60 2L 2768915 2768934 AAATCAGTACTGCCTCAACG 58 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17012 FBgn0031406 FBtr0077804 3 1 1 60 2L 2254359 2254380 ATTGTTTGCTTGGGATCTTCTC 59 2254320 2254341 TAAGGATCCAGTTACGATAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uch FBgn0010288 FBtr0077844 2 1 1 89 2L 2213548 2213624 AGCGAAACCTATGAGAAGC 57 2213477 2213495 GCGCATGTAGAAGAGATCC 58 NA Drosophila melanogaster 61 mRpL48 FBgn0031357 FBtr0077882 2 1 1 60 2L 1710685 1710856 GGATTACCTGGAGTCCCTC 58 1710880 1710898 GATCTGCACATTCAGGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 RFeSP FBgn0021906 FBtr0077915 1 1 2 123 2L 1613140 1613158 GGTTACTTTCAAGTGGCGC 59 1612980 1613053 CACACGTTGATCATCAGCC 59 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926,FBtr0077927 3 2 2 86 2L 1368301 1368371 CACATACGATCTGCATGGC 59 1368421 1368439 CTGTAAATCGTGCCATGCC 59 NA Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 3 2 2 80 2L 1359510 1359530 CGACGGATTTCATAGAGAAGG 58 1359401 1359470 TCTTTACAGTACCAGTTTGGG 57 NA Drosophila melanogaster 61 CG5001 FBgn0031322 FBtr0077972 2 1 1 212 2L 1192002 1192022 TTTACATATCAGTTCCACGGC 58 1192196 1192271 TGATCTGAAAGAGGGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 antdh FBgn0026268 FBtr0073468 2 1 1 162 X 11062397 11062494 AGATTACGAGCGTCAGTCC 59 11062253 11062271 TTGATGATCAGCTCGTGCA 59 NA Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 2 2 2 73 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002261 7002279 TGATTGCCTACGAAACAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4462 FBgn0038752 FBtr0083850 1 1 1 84 3R 15748906 15748995 AGCCATATTTGCCGATATCAC 58 15748842 15748860 AATCACACCAATGGACCAG 57 NA Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083689,FBtr0083688 3 2 2 87 3R 14503204 14503222 GTGAAACATGCAGGAGCTC 59 14503001 14503089 CAGATGATCCTGGATTACCTG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31469 FBgn0051469 FBtr0082844 1 1 1 80 3R 9535331 9535408 CACTTGGGTCGTATGATAAGC 59 9535271 9535292 CTCCAATAGGTTGCTATTGTCC 59 NA Drosophila melanogaster 61 CG12811 FBgn0037779 FBtr0082204 1 1 1 164 3R 5874166 5874186 GCCTTTGTTGAGGATCAAGAC 59 5873478 5873567 GTAATACAGTGTGGCTGGC 58 NA Drosophila melanogaster 61 CG2336 FBgn0037455 FBtr0089748 3 1 1 165 3R 2406642 2406728 ATGTACAACAACCGACCCA 59 2406914 2406937 CTGTCTCAATTTCTAGGATCAACG 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300909,FBtr0300911,FBtr0300908,FBtr0078674,FBtr0300906,FBtr0300913,FBtr0078675,FBtr0300910,FBtr0078676,FBtr0300907,FBtr0078672 3 12 12 64 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587385 1587403 ACATCAGAAAGCTCTCAGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3819 FBgn0036833 FBtr0075048 2 1 1 125 3L 18915150 18915168 TTCAGTGGCCTCTTCTTGG 59 18914786 18915062 AATTGAACAACCAGCTGCTC 59 NA Drosophila melanogaster 61 PDCD-5 FBgn0036580 FBtr0075483 1 1 1 80 3L 16224617 16224635 CCAGGAGGAAATGAAGCAC 58 16224498 16224577 CTGACTTTGAGGGTATTAAGTCG 59 NA Drosophila melanogaster 61 CG5931 FBgn0036548 FBtr0075527 1 1 1 80 3L 15959947 15960023 CAGAGAATCTAGCCAACGAG 57 15959886 15959906 AATACGCATCTATGTCCAGAG 57 NA Drosophila melanogaster 61 comm FBgn0010105 FBtr0075579 2 1 1 119 3L 15720881 15720900 TTATCTGTGGATCGGAGTGG 59 15716356 15720800 GCACGTATGTCCTTATTGCA 58 NA Drosophila melanogaster 61 CG7377 FBgn0036176 FBtr0076100 1 1 1 60 3L 11582991 11583009 AGAAGAAGCACGTGATCCA 59 11583033 11583051 ATCGTCTTGACCTTCTTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 nbs FBgn0261530 FBtr0300189 1 1 1 73 3L 9715361 9715379 ACAGTATGTGCCATCGTCC 59 9715234 9715253 TACGTCGACCATTCTGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 3 1 1 196 2R 13553664 13553744 CCAATTCAGCGACGATGAG 59 13553903 13553922 TCTCCTCCTTTGAGATGACC 58 NA DesignNoJunction Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 1 4 4 141 2R 2515178 2515258 CATCAAAGTACTCACTATACAGGG 58 2515060 2515078 AACAGTCTAGGCTGCTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113 2 1 2 177 2R 482957 486381 AGCCTAATCGGATTCTGCT 58 486520 486540 CTTATACGCATACACGGACAG 58 NA InUTR Drosophila melanogaster 61 CG2528 FBgn0032969 FBtr0300121 1 1 1 92 2L 21981730 21990854 CTTCAGGAAGCTGAAGCAG 58 21981656 21981674 CTTTCCAGCTCCATGACCT 59 NA Nonspecific Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 1 2 3 80 2L 21318354 21318372 GATGCTTACAAACAGGCGG 59 21318415 21318499 AGGAGTATAGCATTGCACCT 58 NA Drosophila melanogaster 61 Gr36c FBgn0045485 FBtr0080964 3 1 1 84 2L 17181358 17181379 GAAATGCTACAAATACTCGGGA 59 17181421 17181498 GCAAATTAAGGTTCTCAAAGGC 59 NA Drosophila melanogaster 61 CG34313 FBgn0085342 FBtr0112511 1 1 1 80 2L 16885726 16885805 AACGTAGTGGGCAAATACGA 59 16885846 16885866 GAATGTTAGATTGTCGGCTCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 dbr FBgn0067779 FBtr0078100 1 1 1 98 2L 67934 67952 TGTTACCGCCAAGTAGAGG 59 68009 68093 ATTCTTAGGCAGTGTACTAAGGAG 59 NA Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 1 2 2 80 2L 357476 357494 ACCTACCTCGTGTTCTACC 58 357183 357433 CTTCCAGTAATCTTCCGCAG 58 NA Drosophila melanogaster 61 CG31976 FBgn0051976 FBtr0302194 2 1 1 65 2L 139294 139312 CTCAGCATCTCGACTTGTG 58 139190 139266 ATAACAGCTCTCCTTGCTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 3 2 2 80 2L 139951 140129 ATAATGTTTCGTTACGGGCC 58 139890 139908 CACTGAATCGTACTGTGCC 58 NA Nonspecific Drosophila melanogaster 61 CG12935 FBgn0033547 FBtr0088221 2 1 1 82 2R 6697629 6697647 GTTCCAGCGCATAAATCTG 57 6697690 6697770 ACAGTATGCCATATCCTATCAG 57 NA Drosophila melanogaster 61 CG13178 FBgn0033685 FBtr0088019 2 1 1 81 2R 8031693 8031887 AATCGGTCCAGGTTATCCA 58 8031630 8031649 TGTTTCGATCCGTTTAGGAG 57 NA Drosophila melanogaster 61 CG34253 FBgn0085282 FBtr0112447 3 1 1 119 3L 18080050 18080232 CGCACCATTGAATCCATCTC 59 18079950 18079969 GTAATCCGGTAATTCTCGGC 58 NA Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085549 2 2 3 195 3R 25823902 25823920 ACAGAGACTATCCCGATCC 57 25824147 25824165 CCTTCTTCCGGTACTCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0300450,FBtr0079699 2 2 3 107 2L 8493820 8493838 AAGATGACAAACCGATGCG 58 8493077 8493749 TCCTCCATTGGATTGGCTG 59 NA InUTR Drosophila melanogaster 61 CG14937 FBgn0032377 FBtr0080264 3 1 1 107 2L 11793938 11794035 AGCGATACAGAACCCACTG 59 11793849 11793869 CAACCTGCTAATCTGGAACTG 59 NA Drosophila melanogaster 61 CG15785 FBgn0040913 FBtr0070747 1 1 1 124 X 5199969 5199987 GTGCGAGATCAATTGCCTG 59 5200156 5200174 TGTCCATGCAGTAGGTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32783 FBgn0052783 FBtr0070615 2 1 1 61 X 3839356 3839374 ATGACAACAACGAACAGGC 59 3839399 3839470 CTCATCGTTTCCACTCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 1 13 15 83 3L 7703369 7703457 CTTCTCGATAATGACCATAATCCG 59 7703309 7703329 TTGGTTACCATAATGGGAAGC 58 NA Drosophila melanogaster 61 RfC4 FBgn0260985 FBtr0073264 1 1 1 130 3L 4135756 4135826 TTATTGCTGGTCCTCCTGG 59 4135644 4135662 GACCACATCGATTCCTCGT 59 NA Drosophila melanogaster 61 msd5 FBgn0035210 FBtr0072724 1 1 1 60 3L 1333067 1333088 GCATTTCATCCAAGTTGTACAG 58 1333028 1333048 CACACGTCCTTTAGGTTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295,FBtr0072296 2 2 2 60 2R 20362486 20362505 ATCGATGCTAGTGAATCGGG 59 20362525 20362546 TTCCCAAGTTCAATCTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 uzip FBgn0004055 FBtr0072397 2 1 1 82 2R 20915991 20916072 GAATATGACTGAACTGGTTACTAGG 59 20916106 20916130 AGGTATAGCTTAGAATAGTCTCCAC 59 NA Drosophila melanogaster 61 CG17030 FBgn0035584 FBtr0073374 2 1 1 60 3L 4980434 4980453 TGGAGATCGACTTTCCACTG 59 4980393 4980414 CTCGTGTTTATATGGATGCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 3 2 2 142 2R 8763437 8763615 GATATTGATGTGCCAATTGCTG 58 8763254 8763274 CCATACAGATCATGGTCACGA 59 NA Drosophila melanogaster 61 vib FBgn0260992 FBtr0083745 2 1 1 81 3R 15044175 15044194 ATAGTGCACATCGACATTGC 59 15044050 15044131 TTGACTGGTAGGTGGTTGG 59 NA Drosophila melanogaster 61 CG7963 FBgn0037584 FBtr0301759 1 1 1 60 3R 4188610 4188628 ACCATCTGGTGAATTCCGT 59 4188649 4188670 GATATCCACCAGAAGTTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40485 FBgn0069973 FBtr0111189 3 1 2 111 X 22363681 22363700 AGGAACTCAACATGTACCCG 59 22363286 22363607 GGACTAATGCTCGTGACCT 59 NA Drosophila melanogaster 61 CG14615 FBgn0031184 FBtr0077369 3 1 1 77 X 21850384 21850402 GCCTGGATCTTTCAGAACG 58 21849930 21849948 ACCTAGTCCTCTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14215 FBgn0031052 FBtr0074746 1 1 1 80 X 19548336 19548491 CCACATTCTCTAAGATTGCCA 58 19548533 19548551 AGTCGTTAAGCAAAGCTCC 58 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 1 4 4 80 X 19466332 19466353 CAACAGAAGGAGGTCATTAAGC 59 19466209 19466292 GCTTTGCTCGTACTGTTCAC 59 NA Drosophila melanogaster 61 CCKLR-17D1 FBgn0259231 FBtr0299681 2 1 1 89 X 18603479 18607397 CTACTATGATTACGGCCACTG 58 18603410 18603428 CGCATGCAGTATAGATGCC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 2 4 4 80 X 16188199 16188217 TCAGTGACATGTACTCGCC 59 16188063 16188156 AATGAAATTCCCTGTGCAGC 59 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161,FBtr0074160,FBtr0074159 3 3 3 80 X 15829502 15829521 AGAATGTTCTGTACGGTCGA 58 15829367 15829461 TAATACGTGCTCTAGAACCCT 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 2 2 2 106 X 15691536 15691556 ACGGATTTCACATGTCTTTCG 59 15691385 15691472 GTGTAGCCTTCTAATATCAGCAG 58 NA Drosophila melanogaster 61 CG18210 FBgn0030636 FBtr0074081 2 1 1 104 X 15334578 15334596 CAGCATCGACAACAACCAC 59 15314735 15315622 TTTATGCTGCGTAGCTGTC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 1 3 3 80 X 12604746 12604845 GCATTCGGATGTTAGTGAATCC 59 12604687 12604706 ATAGCTGACGTTGCATTTCC 59 NA Drosophila melanogaster 61 Spase25 FBgn0030306 FBtr0073506 2 1 1 73 X 11379411 11379430 GAGAGCAGATAGAAGATGGG 57 11379595 11379613 CACTTGTTGACCTTCACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11756 FBgn0030290 FBtr0073450 3 1 1 80 X 11242440 11242458 AGGGCAATCCACATCTGAC 59 11242501 11242520 TGTAGCTAATGGGATCCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 1 2 2 92 X 10644116 10644196 GTCAAGATCCAACTCAAGCC 59 10644043 10644061 CTCCTCGTTGTAGATGGGA 58 NA Drosophila melanogaster 61 CG32720 FBgn0052720 FBtr0071082 1 1 1 80 X 7430030 7430051 AAACACAACGATCATGGAACTC 59 7429758 7429990 CTCGTTTAACTGCTGGTTGG 59 NA Drosophila melanogaster 61 CG3040 FBgn0029925 FBtr0071038 2 1 1 60 X 6866781 6866799 TGTCCAGGAACAAGATCAC 57 6866739 6866757 AGTTCGGTCACAAACAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3224 FBgn0029885 FBtr0070992 3 1 1 169 X 6555394 6555413 AAACCCTCGTTTCTTAACCA 57 6555184 6555202 TGCGTTTCGATACCATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42340 FBgn0259242 FBtr0299863 1 1 1 88 X 6378094 6378112 GTCGATAACGGAGGACCTG 59 6377947 6378044 GCAAAGTGTCCTGAAATAGCT 59 NA Drosophila melanogaster 61 CG3815 FBgn0029861 FBtr0070899 2 1 1 91 X 6189579 6189753 TCATGGAGCAAATCAAGCA 57 6189808 6189826 GTAGTACGGATGCTTCGTG 58 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 1 3 4 91 X 5794984 5795002 AGACACCAAACCGAAAGAC 58 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mof FBgn0014340 FBtr0070829 2 1 1 60 X 5769732 5769750 GAAGATGATGCCTTGACCA 57 5769690 5769708 CTGTTGTGATGACCGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070841 1 1 2 134 X 5640821 5640839 CGAGTATTGGGTGGAGGAG 59 5637846 5637867 CACCAGGAAGAGTATGATTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snf FBgn0003449 FBtr0070748 2 1 1 132 X 5203724 5204168 GTACCGATGAGAAGAAGGAC 57 5204263 5204281 ATCATCTCGTTGGTCTCCT 57 NA Drosophila melanogaster 61 CG3062 FBgn0025612 FBtr0070692 3 1 1 100 X 4536164 4536235 AGTGATAAAGGAGGGCAACTC 59 4536084 4536102 TCAGACAGGCATCGTAGTG 59 NA Drosophila melanogaster 61 CG12184 FBgn0025387 FBtr0070696 2 1 1 177 X 4523919 4523941 GATATAGGAATCGAGTTGGTCTG 58 4523711 4523782 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG15912 FBgn0029712 FBtr0070677 2 1 1 60 X 4443604 4443622 TCTGACTTCCTACGAAGCC 58 4443644 4443664 CAGCGGAATTTCGAAGATACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 2 2 2 80 X 1985913 1986003 TCCTGATCAAGATTCTCAAGG 57 1986045 1986063 GCACCTTCAGGATGTAGTC 57 NA Drosophila melanogaster 61 CG11664 FBgn0040341 FBtr0070163 1 1 1 60 X 770127 770147 CCACATGATCAACTACATCGG 59 770169 770187 TGCGAACATGTTAAGAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 3 3 3 80 X 528075 528165 ATGAGCTCTTTAGGATAGACGTG 59 528017 528035 CATTTACCGTGGACATGGC 59 NA Drosophila melanogaster 61 Su(Ste):CR42426 FBgn0259857 FBtr0300154 2 1 1 93 U 7795355 7795373 GATACACAGCCATGTTCGG 58 7795280 7795298 ATTACTTACTGTGGGTCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42414 FBgn0259845 FBtr0300136 3 1 1 60 U 6754187 6754208 ACCTCTCCTCTAAATACTTGGT 58 6754148 6754167 TGAGTGCTTGTTATGACCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2187 FBgn0017448 FBtr0085861 2 1 1 80 3R 27582880 27582898 TCGTGACAAATTCGTTCCT 57 27582762 27582836 TGTTCATGCCAGTAACCTG 57 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085744 3 1 3 150 3R 26886213 26886232 ATTGTGGCAGAATCAATCCA 57 26884335 26886100 TGTATTCGAAGGGTTCGTG 57 NA InUTR Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 2 2 2 91 3R 26317438 26317456 AATCTTCATCGATCCCTGC 57 26317511 26317597 ATCCAGATGTTGCCAATCC 57 NA Drosophila melanogaster 61 CG15526 FBgn0039744 FBtr0085562 1 1 1 117 3R 25881879 25881981 GACATCAAACTTAAACTTCGGG 58 25882059 25882077 TCTCCAGTGTGGGTTTCTC 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0085528,FBtr0300023 1 4 5 94 3R 25658980 25658998 AAATCGGCGTCTACTGGAG 59 25658060 25658925 CCGAACGTTTCCTAATTATGCT 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 1 3 3 80 3R 22674496 22674580 AGATTGAGATTGACTACAACGC 58 22674437 22674455 GCGAATAGTCCGTCATTGC 59 NA Drosophila melanogaster 61 Mst57Db FBgn0011669 FBtr0084915 2 1 1 90 3R 21656591 21656609 ACTTGTTCTGCTCTTTGCC 58 21656519 21656539 GGGACTATTGATGTGGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 1 1 1 111 3R 21614032 21614174 TTTACGCCGTTCATTGTGG 59 21613939 21613957 TTCATATCCATTCCACGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 3 3 3 166 3R 20647298 20647316 AAGCAGCTCGTATTTGCAC 59 20647445 20647532 CATAACGCTTGTTACCGAGG 59 NA Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084687 2 1 2 191 3R 20540698 20540782 CGATGTCTCCATTTCTGCT 57 20540937 20540955 GATCGCTGCGTATTTGGAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 2 2 2 80 3R 20336669 20336687 TTTCCCAGCGAGTTTAAGG 57 20335953 20336627 TATCACATTGTCGGAATCCAC 58 NA Drosophila melanogaster 61 kal-1 FBgn0039155 FBtr0084549 3 1 1 85 3R 19972391 19972409 GTGGGTTTCCGGTTAAACC 59 19972455 19972537 CACAGTTCATAGACCTTCTCCT 59 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084540 1 1 2 60 3R 19880250 19880268 GTCGCTAGATCCCAGATCC 59 19880292 19880310 GTTGGAGGAGATTGCTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 3 2 2 162 3R 18955121 18958731 CAAGTCAGATTCGTCGATCAG 59 18954979 18954997 GATCACTTCGCTGTAGACG 58 NA Drosophila melanogaster 61 Gclm FBgn0046114 FBtr0084336 1 1 1 60 3R 18511587 18511605 AAAGGAAGGAGTGGCAGAG 59 18511545 18511563 CTTGAGGGCATATTGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nop56 FBgn0038964 FBtr0084230 1 1 1 152 3R 18246038 18246121 AGCTGGTCAAGGGATTCAC 59 18245904 18245924 CGTCCTTATCCAACTGATCCA 59 NA Drosophila melanogaster 61 Gr93c FBgn0045469 FBtr0084159 1 1 1 80 3R 17669890 17669966 CGTGGCATATGAAGTGGGA 59 17669828 17669847 CTTCGAATAGTCCCAAGGGT 59 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258 1 1 3 99 3R 16956695 16956789 TCTACAGAAAGTGCTGCCC 59 16956852 16956870 CAAGAGTCTTACCCGACCG 59 NA InUTR Drosophila melanogaster 61 TotZ FBgn0044809 FBtr0083974 3 1 1 140 3R 16703502 16703576 CCGACTAAGCTTTGTTCTGG 59 16703679 16703697 ATATCCACCTGGGTGTTGG 59 NA Drosophila melanogaster 61 CG5023 FBgn0038774 FBtr0083866 2 1 1 169 3R 15995228 15999817 TAATTCACAATGGCTCCACG 58 15999949 15999967 ATCTTCTTCACCGATCCGG 59 NA InUTR Drosophila melanogaster 61 CG4936 FBgn0038768 FBtr0083831 3 1 1 88 3R 15859169 15859244 CAAGCACCACAGAATCCAC 59 15859295 15859314 GGAACTTCAAGGTGTTGGTG 59 NA Drosophila melanogaster 61 Sgs5 FBgn0003375 FBtr0083461 2 1 1 94 3R 13421544 13421562 CAATCGAAAGCCAGGATCG 59 13421619 13421697 AAGTCAGGAATGGTTTGCTG 58 NA Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 3 2 2 80 3R 11056750 11056768 CCTTATACACCGCCAAAGG 58 11056810 11056896 AGTTTGTAATGGAGGTTTCGG 58 NA Nonspecific Drosophila melanogaster 61 CG33967 FBgn0053967 FBtr0100008 2 1 1 80 3R 10528900 10549040 AGAGATTGCTACACAAAGCC 58 10528839 10528857 ATCGTAGGATTCCTCCCAG 58 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 2 3 3 98 3R 10142500 10142518 GCCGTTTGATGAAGGTCAC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 CG3061 FBgn0038195 FBtr0082869 2 1 1 80 3R 9859758 9859777 TTGGACTCTCCATGATGTCG 59 9859815 9859900 GCTTCACCGAATATTTATGAGAGG 59 NA Drosophila melanogaster 61 CG33977 FBgn0053977 FBtr0100020 3 1 1 164 3R 9228614 9228632 CAAACGCCACTAACTACCA 57 9228400 9228419 AGCCTCCTGAATTTCATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 Men FBgn0002719 FBtr0082660,FBtr0082661 1 2 2 134 3R 8539855 8539929 ATAGCCGTGGTGTCATCAC 59 8539739 8539757 CAATCAGGACATTGGGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 1 1 1 71 3R 8463103 8463123 GCCTTTATGTTCATATTGGCC 57 8463153 8463281 GAGTTGAAGAAAGTGCTTTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 ssp5 FBgn0037985 FBtr0082538 3 1 1 60 3R 7859304 7859322 GATGACCATGAGGGAACTG 57 7859344 7859364 TTTCTTATTCAGCCGTTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sirt6 FBgn0037802 FBtr0082242 3 1 1 60 3R 6087064 6087085 GAAGTATCTTTCCGAATTGCAC 58 6087025 6087045 CCGTCTGCATTTCTTACACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 1 9 9 80 3R 5845147 5845240 TTATCAATCGCTATCGTCCTG 57 5845087 5845105 ATGACAGCTCATTGCACTC 58 NA Drosophila melanogaster 61 Pbp95 FBgn0037540 FBtr0081786 2 1 1 88 3R 3840613 3840632 GAATACTTCCCGGACAAGTC 58 3840683 3840761 GTAGTGAAGGGTTCGTGAC 57 NA Drosophila melanogaster 61 Dfd FBgn0000439 FBtr0081621 2 1 1 115 3R 2627073 2627358 TGAATGAGTGCATTCGTTCC 59 2627436 2627454 AGATCCCGGATAAGAGCTG 58 NA Drosophila melanogaster 61 Osi3 FBgn0037411 FBtr0078594 2 1 1 83 3R 2042474 2042493 TGATGAACCATCTGTACCTG 57 2042537 2043055 GTACCATTGAGATATTCCCGT 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 3 8 8 160 3R 1611779 1611995 CAATACTCCAGGAAGCAGTG 58 1612118 1612136 GTTGAAGAAGGTGGTTCCA 57 NA Drosophila melanogaster 61 CG12171 FBgn0037354 FBtr0078708 1 1 1 60 3R 1459487 1459505 TCTTGGCTAAACTGGGAGG 59 1459526 1459547 TCGTTGAGCTTATCCAAATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 noi FBgn0014366 FBtr0078751 2 1 1 60 3R 1416497 1416518 CGAGTACCGCATATACATAGAG 57 1416458 1416476 GATTCGGAGGATGAAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765,FBtr0078764 2 2 2 80 3R 1316473 1316491 CATGACCATATTCACGCGC 59 1316347 1316430 AGAATTGTGAGACCTCCGTC 59 NA Drosophila melanogaster 61 CG9804 FBgn0037251 FBtr0078943 3 1 1 60 3R 262683 262701 CTACCTGGTGCTTCAGGAG 59 262641 262662 ATAGTCCTTTGTCCTTAGTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1837c FBgn0082994 FBtr0113607 2 1 1 75 3L 5757108 5757126 GCAGAGATCAACAGTGTCG 58 5757051 5757070 TGGACAACTTTAAAGACCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11425 FBgn0037167 FBtr0078507 1 1 1 60 3L 22468397 22468415 CACAGACTACGAGTGTCGG 59 22468437 22468457 TACGTCACGAATCATTTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509,FBtr0112842 3 2 2 110 3L 22333731 22399999 AAGACAAGGCTTCCTCCTG 59 22333639 22333660 GGATTGTTAACGGTTAAACGAC 58 NA Drosophila melanogaster 61 CG7140 FBgn0037147 FBtr0114546 2 1 1 60 3L 22020773 22020792 TACAAGGCCTTTCAAACCTC 58 22020732 22020751 CCATCAGGTAAATCTGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Act79B FBgn0000045 FBtr0078478 3 1 1 80 3L 21979362 21979744 TACCATGTATCCAGGTATCGC 59 21979783 21979804 ATGATCTTGATCTTGATGGTGG 58 NA Drosophila melanogaster 61 CG11249 FBgn0037115 FBtr0078429 1 1 1 85 3L 21665744 21666032 AAACACCATCTATTGGGCG 58 21666081 21666099 TTTACGATCAGGCTCTGGT 58 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089460 3 1 3 90 3L 21166132 21171201 CTCTGTTGACGAGATTGCC 58 21171255 21171273 TGGATAAAGCCATCCAGGT 58 NA InUTR Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 3 3 3 93 3L 19790274 19790292 GTACGATCTGAGCGACTCC 59 19790346 19790436 TCGATATTGCTTAATGACGTGG 59 NA Drosophila melanogaster 61 CG14089 FBgn0036861 FBtr0075015 2 1 1 60 3L 19273774 19273792 CTGATCACCCTCCAAACTG 57 19273732 19273752 CCTCTATGATCACTTCCTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18234 FBgn0036794 FBtr0300049 1 1 1 82 3L 18598262 18598281 CCATAGAATGCAGCCTAACC 58 18598326 18598405 ACCATTTGACGAGTGTCCA 59 NA Drosophila melanogaster 61 CG7564 FBgn0036734 FBtr0075175 3 1 1 60 3L 17508178 17508198 TTCACGACAATGACATACGTC 58 17508216 17508238 AGGAATCCGAGATGTAACTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075486,FBtr0075485 2 2 2 61 3L 16207140 16207158 CAGGAACACCAGGTATCCG 59 16207097 16207120 GTTCGACTTAGTATCTCGATTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0075775,FBtr0114573 1 3 3 80 3L 14054599 14058180 GATATGCGATCAAGAAATGGTG 58 14058221 14058239 TTTGGGTCCAGATATGTGC 57 NA Drosophila melanogaster 61 CG17362 FBgn0036393 FBtr0075764 3 1 1 60 3L 13979915 13979935 CTAGTGATAGCTCCACTGACG 59 13979957 13979975 TCATAGGAATCGACGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10710 FBgn0036377 FBtr0075817 2 1 1 92 3L 13511772 13512488 AACGATAGAATAGCAAGCCGA 59 13511700 13511718 CCCAACTCTCCCTTGTCTG 59 NA InUTR Drosophila melanogaster 61 CG14107 FBgn0036351 FBtr0075866 3 1 1 107 3L 13374354 13374373 GTTAGACCCATTTACCTGGC 58 13374203 13374221 GACGGCTAACTCCTCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5626 FBgn0036266 FBtr0076016 1 1 1 80 3L 12198562 12198644 TATGTTCCTACTAGAAGTTGGACG 59 12198505 12198523 AGGAGCACATATGCTTGCT 59 NA Drosophila melanogaster 61 CG12521 FBgn0040816 FBtr0076074 3 1 1 76 3L 11840688 11840706 ATCAATTCGCAAACCGAGC 59 11840630 11840648 GGCTTATACGACTTGTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 As FBgn0061469 FBtr0076186 1 1 1 80 3L 11202078 11202096 TTACATGCGTACGGATTGG 58 11201954 11202037 ACACTGTTATTGGTATTGGTGG 58 NA Drosophila melanogaster 61 CG32061 FBgn0052061 FBtr0076285 2 1 1 60 3L 10457528 10457549 TACATCCGTGACTTTAATACCC 57 10457570 10457588 CTCCAAGGATACTCCTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 3 3 3 83 3L 7759493 7759570 TGAAGAGCTAAGGCAAACG 58 7759428 7759447 GTTTGCAACCATATCCACTG 57 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 1 3 3 80 3L 7759493 7759571 ATGAAGAGCTAAGGCAAACG 58 7759432 7759451 GCAACCATATCCACTGTTGG 59 NA Drosophila melanogaster 61 CG14838 FBgn0035799 FBtr0076801 3 1 1 80 3L 7576844 7576925 GTCATGGTCTCTGAGAAAGC 58 7576966 7576986 CTGTTTCCATGGAAACTCCTG 59 NA Drosophila melanogaster 61 CG13299 FBgn0035694 FBtr0077013 2 1 1 93 3L 6225295 6225376 GTCATGCAGACAATCAACG 57 6225220 6225238 GTTTCTTGAACCATTCGCC 57 NA Drosophila melanogaster 61 CG10590 FBgn0035622 FBtr0077127 1 1 1 90 3L 5596718 5596796 AATCACAAGTACAATGACCGG 58 5596648 5596666 AGAAGTACGCGTACGTCTC 59 NA Drosophila melanogaster 61 Rpd3 FBgn0015805 FBtr0073317 2 1 1 71 3L 4627497 4627517 CTCAACTATGGGCTCTATCGA 59 4627628 4627646 CTTGGTCATCTCATCGGCA 60 NA DesignNoJunction Drosophila melanogaster 61 CG7465 FBgn0035551 FBtr0073306 3 1 1 257 3L 4480325 4480427 GACAATATGAAACTCTTCCTGGTC 60 4480643 4480661 GTTGAAGAGCTCGTTGACG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33966 FBgn0053966 FBtr0100007 1 1 1 93 3L 1234395 1234413 ACACTACGCACCAAGTACC 59 1234467 1234553 GAATAACTATGGTGCCCAATCG 59 NA Drosophila melanogaster 61 LysD FBgn0004427 FBtr0072634 1 1 1 178 3L 1211057 1211075 GTTCCTCGTGACCAATTGG 58 1210897 1210915 AATCCGCATTCGTTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33417 FBgn0053417 FBtr0086409 1 1 1 60 2R 15630102 15630120 ATACATCGGTTCTCGTCCG 59 15630060 15630078 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 1 3 3 80 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962847 20962923 TTATGGAACTCGTGCTTGC 58 NA Drosophila melanogaster 61 CG15873 FBgn0035003 FBtr0072357 1 1 1 60 2R 20317552 20317573 GATACATGTATCACACTTGGCT 58 20317460 20317479 GTTCATTCGAATATGGGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 3 3 3 81 2R 20308343 20308874 TGAGCGGAACTATACATTGGA 59 20308282 20308300 TACCGTAGAGGTCAGTTGC 58 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 1 2 2 84 2R 20009282 20009300 CATCACCTGCAAGATGTCC 58 20009346 20009441 GTGCTCGTTATCATCGTAGTC 58 NA Drosophila melanogaster 61 CG13559 FBgn0034870 FBtr0072057 3 1 1 60 2R 19390915 19390933 GGAAACACGGAGATCACAC 58 19390954 19390975 CATGAGTGATGAGGTATTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32834 FBgn0052834 FBtr0071991 3 1 1 104 2R 18871049 18871067 TGTACCTTGGTTCACAGGT 58 18870865 18870981 TACTGGGTACGGTAAGTGG 58 NA Drosophila melanogaster 61 bonsai FBgn0026261 FBtr0071860 3 1 1 98 2R 18525555 18525632 GTTGGATAAAGCCGACGAG 58 18525694 18525712 TCCTTGACCATCTCATCGC 59 NA Drosophila melanogaster 61 CG15650 FBgn0034565 FBtr0071554 3 1 1 211 2R 16865710 16865728 ATTAATTGCTGCACTGGCC 59 16865445 16865463 GGTCCAGATAGTCCAGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0300946,FBtr0071519 1 2 2 131 2R 16832900 16832918 GGCTACTCTTTCACCACCA 59 16833013 16833031 GTACGACTTCTCCAGGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 3 4 4 91 2R 16557770 16557788 GCGATAAAGTTGAGCTGCC 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 1 3 3 93 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148397 ATGTTCTTGGTCTTCGAATCG 58 NA Drosophila melanogaster 61 CG15127 FBgn0040730 FBtr0086482 2 1 1 68 2R 15568671 15568690 TAGAGGTGATAATGCCCTCG 58 15568622 15568640 GATTGTAGCTGGGTTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11257 FBgn0034442 FBtr0086525 3 1 1 92 2R 15278959 15278980 TAATTCAGCCCATCTTGAAGAG 58 15279083 15279106 CCTTTAACCAGATATCCTCATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15099 FBgn0034400 FBtr0086628 3 1 1 81 2R 14731163 14731242 TGGATAAAGATATCAGTGCCTC 57 14731103 14731121 TTGAGCTTCTTGATGCTCC 57 NA Drosophila melanogaster 61 CG15068 FBgn0040733 FBtr0086727 1 1 1 81 2R 14277961 14278058 CTTTGGCTAGTGCCAATCC 58 14277898 14277916 TAATCGCCGCGTATATTGC 58 NA Drosophila melanogaster 61 CG18539 FBgn0034325 FBtr0086761 1 1 1 89 2R 14185902 14185920 AAATTGATCGACTTGGGCG 58 14185973 14186057 CTGCCTCCACCATAGTGTC 59 NA Drosophila melanogaster 61 Chit FBgn0013763 FBtr0087111 1 1 1 80 2R 12579390 12579857 GTTTCGTCAAGGAAGGTCTG 58 12579900 12579918 CGTAGACCAGATAGTCGCA 58 NA Drosophila melanogaster 61 CG8306 FBgn0034142 FBtr0087120 1 1 1 102 2R 12477569 12477650 AGGCCTATCTTGGTTCGTC 59 12477485 12477503 CCAATAGACGCTTGCTGTC 59 NA Drosophila melanogaster 61 cato FBgn0024249 FBtr0087183 1 1 1 60 2R 12165492 12165510 ATTGAATGCGGCTTTCGAG 59 12165450 12165468 TTTCTGGTCAATGGACGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204,FBtr0087205 3 2 2 66 2R 11900055 11900073 ACCTCTTGGATAACCACGG 59 11900102 11900179 AGCCCAAATAGTGATAGGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG8157 FBgn0034010 FBtr0087390 2 1 1 135 2R 11213735 11213753 CAATTTGGACCTGGTGGTC 58 11213618 11213636 CTTGACCGCCATATTCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30058 FBgn0050058 FBtr0087767 3 1 1 80 2R 9098390 9098409 TTCGTGTGCATTAAATTGGG 57 9098188 9098350 CAAGCAGACTGCAATAATTAGG 57 NA Nonspecific Drosophila melanogaster 61 CG13155 FBgn0033723 FBtr0087956 1 1 1 107 2R 8267378 8267396 ATACCCGCTACAATCGGAG 59 8267227 8267307 TGAATCTTGCCAGGATCCT 58 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015,FBtr0088013,FBtr0088014 3 3 3 198 2R 8055658 8055679 GAAGAGAATTTAATGACAGCGG 57 8055415 8055499 AAGACTTACGGCTGTAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074,FBtr0088073 3 2 2 92 2R 7561253 7561272 ATCTCTGCACGATCATTGTG 58 7561325 7561404 ATAGAAGAATCTTTCTGCCCG 58 NA Drosophila melanogaster 61 CG9067 FBgn0033605 FBtr0088182 3 1 1 81 2R 7166602 7166623 GAAATCTCCACTTGCTCTACAC 59 7166478 7166562 TCGAACTTCTTTGAAGTCAGC 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 1 3 3 80 2R 5323910 5323928 TCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 CG13744 FBgn0033363 FBtr0088666 1 1 1 103 2R 4902913 4902990 CCCATCATAACCACACTGGA 59 4902829 4902847 ATGTGTCCATCGGAGTGTC 59 NA Drosophila melanogaster 61 CG8237 FBgn0033350 FBtr0088653 2 1 1 60 2R 4813722 4813744 GTTCAACATAGAGTTCGATGAGG 59 4813762 4813782 AAAGAGGTCTTCTTGGTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ed FBgn0029507 FBtr0086181 3 1 1 82 2R 2898218 2898236 GTAGTCTTCCTGGTAGCCT 57 2898085 2898172 ATGACCACAGAGTACGAGG 58 NA Drosophila melanogaster 61 Tdc1 FBgn0259977 FBtr0086143 2 1 1 95 2R 2567571 2567589 CTTGGATCCGGGTTACCTC 59 2566506 2566524 ATCTTCTGCTCGAAGTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 2 4 4 89 2R 1595873 1596126 CGCTAACATAGATCTCAACACTG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 His3:CG33836 FBgn0053836 FBtr0091840 1 1 1 60 2L 21490111 21490129 CGCTCAGGACTTTAAGACG 58 21490153 21490171 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33831 FBgn0053831 FBtr0091835 1 1 1 60 2L 21481560 21481579 AGTTGAGAAGAAAGTGGTCC 57 21481602 21481620 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33815 FBgn0053815 FBtr0091819 1 1 1 60 2L 21454669 21454687 CGCTCAGGACTTTAAGACG 58 21454711 21454729 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33810 FBgn0053810 FBtr0091814 1 1 1 60 2L 21437226 21437245 AGTTGAGAAGAAAGTGGTCC 57 21437268 21437286 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10189 FBgn0032793 FBtr0081284 2 1 1 60 2L 19492028 19492046 GCTCACGTTATGGGATGGA 59 19491986 19492005 AAGGCTGATGTAAGGTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)37Cc FBgn0002031 FBtr0301814,FBtr0081165,FBtr0081164 2 3 3 176 2L 19123220 19123238 GATCTACACCATTCTCGGC 57 19122759 19122777 ATAAAGCCGAACTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31800 FBgn0051800 FBtr0081179 3 1 1 98 2L 19033921 19033998 ATCACCGGAAGAATGGAGTC 59 19033842 19033862 TCCTTAATCTTGTCCAGTGGG 59 NA Drosophila melanogaster 61 Gr36a FBgn0045487 FBtr0080962 3 1 1 80 2L 17176816 17176834 TACTTCGGTAGGGCTAACC 58 17176878 17176967 TGCAGAAATTCCTGAAGCC 59 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 2 2 2 81 2L 16986134 16990244 GGACATGATTGTTGTGGTGAC 59 16990287 16990305 GACCATGTCGCCAATTTGG 59 NA Drosophila melanogaster 61 fzy FBgn0001086 FBtr0080833 3 1 1 137 2L 16311405 16311519 ACTTTCTGGTGAACAAAGACTC 58 16311617 16311635 GGGCCACTTCAGAGATGAG 59 NA Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080577,FBtr0080576 2 2 2 80 2L 13775522 13775540 GAGCACGTCATCACAAACG 59 13775396 13775479 ATTCCAGATGACCGTATCGG 59 NA Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0080467 1 1 2 80 2L 13369308 13369391 CAAAGATTAAAGTGAGCAACCC 58 13369432 13369450 TTGCTCGAATCGTGTATGG 58 NA InUTR Drosophila melanogaster 61 CG16826 FBgn0032505 FBtr0080464 3 1 1 60 2L 13348333 13348351 GGATAAGCTGACGAATGGA 57 13348370 13348393 GAGTAGCTCATTTATGATCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12404 FBgn0032465 FBtr0080430 2 1 1 109 2L 12994232 12997475 TTAATCACCATTCAGGGCAC 58 12994142 12994160 TGATGGTCCATGGAGAAGG 58 NA Drosophila melanogaster 61 CG5781 FBgn0032448 FBtr0080409 2 1 1 60 2L 12696745 12696765 AGGCTCTTCTATGGACTACCT 59 12696705 12696723 AAAGGAGGACTTGACAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 giac FBgn0032368 FBtr0080268 3 1 1 97 2L 11610907 11610986 AAACTTCGATGGATTGCGA 57 11610828 11610846 CACTGTAGCTCTGAGTACG 57 NA Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 1 2 2 102 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328646 10328666 GAAATCCATCGATGGTTGGAG 59 NA Drosophila melanogaster 61 tai FBgn0041092 FBtr0079794 3 1 1 80 2L 9235197 9235215 CAAGCGTGGAGATATGACC 58 9235258 9238971 CAAATCTCACGATACGTTCG 57 NA Drosophila melanogaster 61 Peritrophin-15a FBgn0040959 FBtr0079713 2 1 1 93 2L 8396054 8396072 CAATTGCACCATGAAGTCC 57 8395908 8395926 GTCAGAATTGGGATCGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 3 4 4 80 2L 8188862 8188937 TCTGGACATTTATCTGGTACGG 59 8188974 8188996 CGGTATAGGAAGAGTAATTTGGC 59 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 3 2 2 151 2L 7800630 7800721 TAGAGGCCCTTGGAAATGG 59 7800834 7800854 GTTGAGGTTAGTCAGTTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11070 FBgn0028467 FBtr0079297 2 1 1 82 2L 6659754 6659838 CGTTAAAGGTTCTCCTGGT 57 6659884 6659902 CCTTAGCATACTAACGCCC 57 NA Drosophila melanogaster 61 CG11043 FBgn0031831 FBtr0079289 1 1 1 231 2L 6559704 6559778 AAAGTCAGCGCTAATTGCG 59 6559973 6559991 CTCGTCCTTCTCAATCCAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG13994 FBgn0031772 FBtr0079188 2 1 1 65 2L 6063219 6063289 AGAAGTCCAAATGCTGCTG 58 6063318 6063336 CATCCTCAGAGGAGCTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 jet FBgn0031652 FBtr0079057 2 1 2 97 2L 4948900 4948918 TATCTCCGACTATGGCGTG 58 4948695 4948713 CCAGGGAGAGTTCTGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Or24a FBgn0026394 FBtr0289965 1 1 1 80 2L 4165058 4165076 TCTACACTTGTGCCGTAGG 59 4164941 4165015 CTAGATTGGAACACGCTTCC 58 NA Drosophila melanogaster 61 pgant2 FBgn0031530 FBtr0077592 1 1 1 80 2L 3407524 3407543 GAATCGCTTCAATCAGGAGG 58 3407404 3407483 GTACGACACATGGGATTTCTG 59 NA Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 3 1 1 74 2L 2845448 2845527 AGTTAGTGATCGGTGCTCC 59 2845392 2845410 CAACCTCTTCTACTGTGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17650 FBgn0031365 FBtr0077901 3 1 1 116 2L 1759008 1759032 CGTTTATAATGACTATCCCATGGAG 59 1758642 1758935 GCTTCGAATTGTTGTTCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3876 FBgn0031284 FBtr0078039 3 1 1 82 2L 818754 818772 TGAATGTGATCGCCTTTGG 58 818630 818710 GAAGAAAGTATAGACTCCCGC 58 NA Drosophila melanogaster 61 CG3883 FBgn0031281 FBtr0078041 3 1 1 82 2L 815216 815289 TGGGAGCTGATCAATAATGTC 57 815154 815172 TTTAGCACTTCGTTCACCA 57 NA Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078,FBtr0078077 3 2 2 81 2L 555563 555581 TATATTGAGAGCTCCGGCG 59 555437 555520 GTATCTTTACCTGCGAGAACC 58 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 1 5 5 109 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11376 FBgn0031216 FBtr0078103 3 1 1 81 2L 97767 97788 CAATTAAGCGAATCGTACACCA 59 97828 97898 CATCTATGGACAGCTCTTTGC 59 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 3 2 6 98 2L 15706 17066 TTGCTTATCGTAAGACGGCA 59 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 3 4 4 103 2L 1085276 1085294 GTGCATCGGGACATAAAGG 58 1085127 1085210 TGATTGGCACCATTGATGAG 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 3 2 3 81 2L 1179514 1179866 GAGTTAACCCAGGGAGTCC 59 1179911 1179929 AAGTCCAGTCTGAGATGCG 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 3 5 6 197 2L 1726645 1727655 AAAGTACTTGTGACAGCAACG 59 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 2 1 1 65 2L 1883758 1883776 CGAATCTAAATGCCACCGC 59 1883161 1883180 TGAGCTTCTGCATATTCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 3 4 4 89 2L 2223626 2223718 AGATTACGAGACAAAGACAGTG 58 2223767 2223786 CTTGATAAGCAGAGCTCGAG 58 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077772 2 1 5 101 2L 2450316 2455066 AGTGTCAGATAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 2 2 5 101 2L 2452405 2455066 TAAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 3 2 4 152 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741234 2741252 GGTTGGTGAAGGTGAACTC 58 NA Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 1 2 2 80 2L 2810580 2810602 CAGAAGGACTCCAAGTATTTGTC 59 2810639 2811165 GATCTTCATCCACTCATCTTGC 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0290241 3 1 2 127 2L 2971048 2971129 GAAAGTAAACCAGCTCGAGG 58 2970940 2970958 TTTAATACGGCAGCTCCAC 57 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608 3 1 2 157 2L 3277971 3280318 GTTACTTTCAGTAACCTGCAGG 59 3277835 3277853 GTGCGTCGGTTCTTATCCT 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 3 10 10 81 2L 3502697 3502715 CGATTATGTCGCCAATGGA 58 3502546 3502652 TTCATGTTGATGAGGCTGC 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 3 8 10 81 2L 3500688 3500706 AAGCTCTTCAGCAACAACG 59 3500563 3500645 GGGTGATAATGTCTTGTTGCA 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 1 8 9 83 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878994 3879012 CTGATTAGCATCACCGCTG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 3 4 9 80 2L 3887037 3887055 TTTCGTCTCGATTCACAGC 58 3884510 3886995 CTGTGACTCCTGATTCATTGG 58 NA Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 2 2 2 80 2L 4840095 4840174 TTGATTCTAGGTTGGATGGAC 57 4840215 4840234 TAGTTTGGCCAATTCTCCAC 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 3 6 6 104 2L 4909615 4909687 CATTCTATGGGTTTCCGCT 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 3 3 3 105 2L 5034886 5034904 GAGACATTGGTCCAAGAGG 57 5034972 5035073 CCAATAAGACCTTGACGTCC 58 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 3 6 6 61 2L 5042504 5042522 CAACGTGGAGTTCGATCAC 59 5041807 5041825 AGTCGAATTCCTGAGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026 1 1 2 80 2L 5077585 5077606 TTCTATGAGATTGGCTCCTACG 59 5077249 5077544 CTGCCAAATACGGAACGAC 59 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 2 3 3 80 2L 5769936 5770024 AAGGCACCCAGAGTATTTCC 59 5769875 5769894 CTGTAGCTCTGTCTTGTCGT 59 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 2 2 2 83 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892689 5892710 TAGACTGAACGCTTATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 3 2 2 129 2L 6067223 6067294 TACTTGAGAAGCTGGTGCC 59 6067387 6067405 TATTGACCTGCAAAGCCCT 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247 2 1 4 87 2L 6680968 6680988 GACGATGAGACTGAACAACTC 58 6680533 6680679 AACCATCAGACGTCTGTGG 59 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247 3 1 4 88 2L 6680968 6680987 ACGATGAGACTGAACAACTC 57 6680531 6680678 ATAACCATCAGACGTCTGTG 57 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079376 2 1 3 82 2L 6801840 6802252 GCTGTAATGAGCTTTATGCCC 59 6801778 6801797 GATCCTACCTCTACGCTCAC 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0302162,FBtr0290119 2 2 3 118 2L 6973654 6973672 GTAAGATGAGCACGTTGGC 59 6973489 6973576 GCTATCACTATCACTCTTCTCCT 59 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 2 2 3 81 2L 7059186 7060972 CACAAAGGAGGAGAAATCCA 57 7061016 7061034 GAGAATCTTCTCGCCACAG 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079514 2 1 5 81 2L 7696203 7697991 ATCCGACAATGGGAGTGTG 59 7696140 7696158 AGTAACCACCCATGAGGTG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300333,FBtr0300331,FBtr0300334,FBtr0300332 3 4 4 80 2L 8187028 8187046 CTCTGATGTTCCTCTGCGA 59 8187090 8187176 TTTCCGTTTGCTGAGTTCC 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 1 2 4 91 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245142 8245161 GTAATCGTATAAGCCGGAGC 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 2 2 4 92 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245141 8245160 CGTAATCGTATAAGCCGGAG 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273381 2 1 4 83 2L 8244490 8244977 CGGAGAAGGTAAACCTCTCC 59 8244426 8244444 TCTTCTCGTTTAGGCGACC 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 2 2 4 94 2L 8428059 8430291 CAAATTGAGGTGGATCTCGC 59 8430348 8430366 TATTCGCATGTAACGGGCA 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 3 4 4 130 2L 8536951 8536969 TCATTGGACGCATACAACC 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079748 1 1 4 136 2L 8690245 8691024 ATCCAGTGACGAATCGGAG 59 8690127 8690145 TACTGTTGCTCAGTCCCAG 59 NA Drosophila melanogaster 61 Tsp29Fa FBgn0032074 FBtr0079754,FBtr0300289 1 2 2 84 2L 8935683 8935703 GGATTCTCCGGATACATTTCC 58 8935749 8935895 TTACGCCAAAGAACTGGAG 57 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 3 3 3 81 2L 8938685 8938704 ATTCATTCTGATCGCAGTGG 58 8938745 8938865 CACTCCGTACAGATTAATGACC 58 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 3 3 3 80 2L 9911768 9912139 CACTTTGACACAATGGCCA 59 9911706 9911724 CTCCCTTAGGTATCGCACG 59 NA Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 2 2 2 152 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328596 10328615 TGACCAATAGCTGGAGAGTC 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 3 5 6 101 2L 10399596 10399614 AAATGCATCAGGGAAAGCA 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 3 2 2 81 2L 11100218 11100310 CAGGAAATAGAAGTCATCCATTTCC 60 11100161 11100181 TGAGGACCTTGGTCTTATTGG 59 NA Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239 1 1 2 279 2L 11518682 11518701 GCGTCGATTTAAGTACTCCC 58 11518943 11519018 TTCCGTTACAAAGCGAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 5 6 103 2L 11835160 11835179 CTCGAATATGTCGTTCACCG 58 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 Or33b FBgn0026391 FBtr0080279 3 1 1 104 2L 11936838 11936862 CCAGAGGAAACAATATACTTAACCG 59 11937105 11937123 AATATTCATGGTGCTGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089573 3 1 3 100 2L 11987378 11987704 ACTCGGATAGTTCCGACTG 58 11987296 11987314 CTCCTTGTCACGATTGGAC 58 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 3 2 2 127 2L 11991264 11991341 AAATATAGCTCCCATGTCCG 57 11991429 11991449 TCATAAATGGAAACCCGATCC 58 NA Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 3 2 2 81 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053024 12053044 AGTTGACCAGAACATAGATGC 58 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080360 2 1 2 100 2L 12133160 12133178 GACACGAACCATTGACGTG 59 12131420 12133098 TCCAGTGCAAAGATATCTGCA 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 2 1 8 76 2L 12460592 12460610 TGTGATGGTGCCTAATGCA 59 12458169 12458187 TTAGCACTTCCACCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 2 1 8 83 2L 12477157 12516492 TATCAGCAGTGCATCTGGA 58 12458201 12458219 ATGAGATGCGACTTGACCA 59 NA Drosophila melanogaster 61 PICK1 FBgn0032447 FBtr0080395 2 1 2 80 2L 12695151 12696275 AGAGGATAAGATGGGCATGAC 59 12696317 12696335 ATGCTGATGCCAATCAGGT 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 1 2 17 136 2L 12727106 12729938 ATTTGGCCAAGTGCTATCC 58 12730038 12730056 ATGGCGTTGTATCGAACAG 58 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 3 3 17 90 2L 12731059 12737970 TCTTTATGGTTCTGGCTACC 57 12738023 12738041 AAGTAGTACAGGAAGGCGA 57 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0113040 1 1 9 171 2L 13274688 13274708 AAGGTTACCAGAATTACCCAC 57 13274841 13274998 TAATTGCCATTCTGCAGCA 58 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0080535 3 1 3 100 2L 13785504 13785800 CTATTTGCTTCCACTCAGATCG 59 13785861 13785879 GACGAGAACCACGTAGACC 59 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 3 3 3 105 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357596 14357614 TGTGTCCCAGATCTGTAGC 58 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 3 5 5 81 2L 14984076 14984210 GTCTAGTCATATTAATCACTCGCC 59 14984018 14984036 GAGAAGGCTTTGTATGGCG 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 3 3 3 83 2L 15958576 15958708 GGACTCGAGCATATGTCTG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080822 3 1 2 80 2L 16238883 16238903 CATCTTTCTCAGCATAGAGGT 57 16238942 16239220 TCATCTGTGTATTCCATAACCG 58 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 3 3 4 87 2L 16692117 16696596 TCGAATAGAACCAGACGTGG 59 16696644 16696664 CTGATGCAGGTAATTGAGTCC 58 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080939 2 1 2 89 2L 16702876 16728200 GAATATGGGAGTTTGCTTGGG 59 16702807 16702827 ATCATGACCGGAATTGAAGGA 59 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 3 2 2 134 2L 16800511 16800610 AGTTCTATGACCGTCTTTGGA 58 16800706 16800724 TTACTCCAGGCACATTCGG 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997 1 1 2 80 2L 17489892 17491809 AAGAAACGGAGATCCGTCC 59 17489830 17489849 TAATCGCATGTTTAGCCACC 58 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 2 2 3 87 2L 19166349 19168105 AGCAGTAAAGCTGTTACTCCT 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 3 2 4 80 2L 19387915 19387933 TATAACTGGTCTGGCCACG 59 19387761 19387872 TGGATGCGAATATCGTTGTC 58 NA Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241 2 1 2 158 2L 19487940 19487960 GAACCTAAATGAAGTGGCCTC 59 19488080 19488194 TTGAGGCTCTCGGATTGAC 59 NA Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 3 2 2 183 2L 19496695 19496715 TGCGAATAACAAGTCTACCCA 59 19496859 19496969 GCCGAAGTTCTTAAAGTGCC 59 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 1 3 3 88 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081441,FBtr0081444,FBtr0081447 1 4 9 127 2L 20876951 20876969 CACTAGTCAGTCGCAGGTC 59 20874420 20875087 ACAGCGTGAACAGAAATTGTC 59 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 2 3 3 84 2L 21172325 21172343 GTATCCACGAGACCAACCT 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 2 11 13 138 2L 21308292 21308310 AAGTGCATGAATCTGGCCT 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081509 1 1 4 85 2L 21292855 21292879 CATGAGTAACCGTGTTACTATTCAG 59 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 3 4 4 92 2L 21389066 21390056 ATTTACCGTTGAAACCGGC 59 21390112 21390130 ACGGATCCTCTTCTGTCTG 58 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 2 3 3 91 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759240 AAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 CG1832 FBgn0032979 FBtr0085964,FBtr0100407 3 2 2 102 2L 22168194 22168212 ATGCCTCTCAATCAGGGTG 59 22168057 22168131 ATATGGTGTTAGCTGCAATTGG 59 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 2 3 3 95 2L 22959942 22959962 AATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 1 3 3 102 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 2 3 3 103 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980106 980127 ACTCCTTTGATTACAAGCTTCG 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0111115,FBtr0086082 1 2 3 85 2R 1182499 1182517 AAGTGTTCGCGTCCTAGAC 59 1182566 1182636 TTCTTTCGACGATTGCCAC 58 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 3 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662529 TTATATCTTGGGCTGGATACG 57 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 2 4 4 80 2R 1662571 1662645 TGCATCTCGTTACAGACTCC 59 1662510 1662531 TATATCTTGGGCTGGATACGAG 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 2 2 2 80 2R 2589416 2589901 GGAGGAAGATACCTGGTATGAC 59 2589357 2589378 AACTTCATGTCCAGAAAGAGTG 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0086137,FBtr0301423 1 2 7 105 2R 2625506 2625526 GTCAATGCCAAGATATTGCAG 58 2622408 2625008 GCTGTTTGTCCATAACCCT 57 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 2 3 3 99 2R 2890650 2890731 ATGTCCATGACGTACTCGA 58 2890793 2890812 TGATCTCCAGGTACTTGTCC 58 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 1 2 3 80 2R 2880548 2880631 AACGCTCCAAGTGTTATCC 57 2880672 2880693 GCTCCAGGAAGTTACATAAGTC 58 NA InUTR Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111049 3 1 59 92 2R 3243942 3249237 GATTGGTCATCACAGAGCC 58 3243868 3243886 AGGAGCTATTGGATTTGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111064,FBtr0111057,FBtr0111100 1 3 59 80 2R 3236477 3246963 CCACAGCCTTTCTTTAGATGG 59 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111072,FBtr0111058 2 2 59 80 2R 3236477 3246746 TATCCACAGCCAATATCTAGATGG 59 3236420 3236438 CACACGGTCATTTAGCACC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 2 2 59 99 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236471 3243202 CTTGTACCATCTATAGAAGGGC 57 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 1 2 59 81 2R 3249269 3249288 GAACCAAACATCGTCTGACC 59 3247695 3249225 ATACTGCCAACAGGCTCTG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111102,FBtr0111095 3 2 59 102 2R 3243262 3243280 AAAGGACGGTTTCAGTCAC 58 3236468 3243201 GAACTTGTACCATCTATAGAAGGG 58 NA Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 2 2 2 78 2R 3331900 3331918 TGTGAGGAGAAGATTCCGC 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 1 5 8 107 2R 3355321 3356622 CTATGCCGTTGATGTGCTG 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 3 5 8 109 2R 3355323 3356624 CACTATGCCGTTGATGTGC 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 2 2 3 148 2R 3472856 3474449 AAGACCGAAATCGCAAACTG 59 3472727 3472745 CCGAACGCTTGATTTCTCG 59 NA InUTR Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0088914 2 2 6 143 2R 3517706 3517724 TACATCTGCCTCATGGAGC 59 3517830 3521736 CTTATTGGCTAGTTTGCCCA 58 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112578,FBtr0112580 1 4 4 82 2R 3724655 3724758 CATTCAGGACTTTGGAGATCG 58 3724593 3724611 GAAGTCCAGTCCTCACCTG 59 NA Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 1 2 2 83 2R 3991723 3991741 AATTCACAAACTCGTTGCG 57 3991600 3991678 CGTATTTAGCAATAAGCTCGG 57 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0088815 1 1 2 154 2R 4026650 4026668 GACAAGGAGCCCTTCTACG 59 4026089 4026452 ATGTAGCCAGAGGACTGGA 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 3 2 2 60 2R 4048556 4048575 GAGTGCAAGTCTATTGTCGC 59 4048412 4048430 CGAGCGATTCTTAGAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 2 4 4 80 2R 4367409 4367429 TTGTTATTTGCACGGTCTACG 59 4366972 4367369 TGGTGAATCCAATATGCTTCG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 3 9 9 80 2R 4568219 4568302 CATGGACTACCGTGATATGAC 58 4568343 4568362 TCTTCCCAGTTGACTAGACG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 1 2 12 181 2R 5006308 5006327 CACATCAACGTCAAACAGTG 58 5006542 5009249 CATTATCCTCGGATTGCTGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 2 3 12 158 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006545 5007268 AACATTACCACCGGATTGC 58 NA Drosophila melanogaster 61 CG11784 FBgn0033381 FBtr0088579,FBtr0302495 1 2 2 128 2R 5010060 5010134 GGAATTTGTCAAGCTAAACCC 57 5010224 5010242 TAGAGTTGGTCATTCCCGG 58 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 1 2 2 115 2R 5095794 5095812 GTTTGTGACCTTCGAGGAC 58 5095963 5095981 CCAGGTACAGATAAGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 1 2 4 174 2R 5118142 5119261 ATTTCAGTGAATGTGGGATGG 58 5117988 5118006 CCTCCGAGTAGTTGGTCAG 59 NA Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349 3 1 2 141 2R 6206586 6206604 AAACTGTCACATCAACGCC 59 6206706 6206787 ACAGATATCGGGTCTAATTGCA 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 3 3 3 180 2R 7467664 7467747 AAATGGAGCTTCATGAGGAC 58 7467438 7467457 TTATCGAAGATCTGACGCAC 57 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 2 2 2 89 2R 8087084 8087347 TGTGTTCAGAGATGTTGAGC 58 8087014 8087032 ACTTTCAGGACGTTGAAGC 58 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 1 2 2 80 2R 8258089 8258181 GAAATGACGAAGGACGATGG 59 8258219 8258242 ACTTAGATGACTCATATAGTGCCC 59 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 3 3 3 93 2R 8527411 8527429 TAGAGGATCGCTTTCTGGT 57 8527486 8527565 GGAGAAGCTCTTATAGCCG 57 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 3 3 6 124 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548586 8548604 AGAAGAGGGTTAGCACCAG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 2 6 6 80 2R 8765630 8765648 TCTTGGGTCTGTTTACAGC 57 8765510 8765586 CCATGAGAACCTCTTTCGG 57 NA Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 3 2 2 81 2R 9089462 9089480 CACGGAGGAACTTTACCAG 57 9089524 9089607 GGATGTATTGCTGGGATAGC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 3 3 12 104 2R 9310220 9323715 GTACGAAGATGACGAGGAC 57 9310134 9310152 TTACCGTACTTAGTGGGCT 57 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 2 1 1 73 2R 9725506 9725524 AAGGAGATAGCCACCTTGC 59 9726001 9726020 AAGTTGATATGGCCATTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087618,FBtr0301964 3 3 15 81 2R 9770048 9788957 GGCATACGAACTAGATCAAGC 59 9769987 9770008 GGTAACCCATTTCAACAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087621 1 1 15 80 2R 9771646 9771664 CGAAGAACAACATCGACCT 57 9770037 9771602 TCTCGAATACTGCTTGCCT 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0273225,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301591 2 11 15 83 2R 9770040 9781642 GGATCAAGCAAGCAGTATTCG 59 9769977 9769995 GTTCCACAGTGGTAACCCA 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 3 9 15 147 2R 9759602 9759621 CGTGGAGAAATTGATCGAGG 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 3 3 5 75 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA DesignRelaxed Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 2 4 4 198 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9876939 9876957 TATTCCAGGCCACCATACG 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 3 3 4 181 2R 10641644 10641662 CTGCTGTGGGTAAATCGAC 58 10641385 10641501 GATTCTCATTGCTTTCTCGTG 57 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 3 4 6 81 2R 11172468 11178449 GACCAATTGGGTGTTTCACC 59 11172406 11172427 GCATGGTATGAATTTGATGCAC 59 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087337 1 1 5 82 2R 11444247 11444265 ATCGACGAGTGGAATATGC 57 11444310 11449329 ACATTACGATCTTCCATGGC 58 NA Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0087337 3 1 5 83 2R 11444246 11444265 GATCGACGAGTGGAATATGC 58 11444310 11449329 ACATTACGATCTTCCATGGC 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 3 7 7 124 2R 11550671 11550750 TTATCAATGCACAGGGCCA 59 11550565 11550584 GTACCGATACTTCTTGCCGA 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 3 3 5 137 2R 11773781 11773800 TGACCGTGATATACGAGACG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 3 3 3 80 2R 11812930 11813011 GTTAATGATCGGCAGCTGG 59 11812868 11812888 GGACTTGAGACCCTTACAGAG 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 3 3 3 83 2R 11881891 11881975 ATTTACCAGTGAGGAAGCAC 57 11881827 11881845 ATAAATCCTATGCTGCGGC 58 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087256 3 1 3 162 2R 11973117 11973562 GATTAGCTCTAAGGAAGGAGGA 58 11972902 11972920 GGTGGAGACAAAGTTGCTG 59 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220 2 1 3 166 2R 12000416 12000434 TCAAGACCAGGCTGATGAG 59 12002366 12002871 CTTGGGCATAGTTCTCCCT 58 NA Drosophila melanogaster 61 CG8445 FBgn0034088 FBtr0087246,FBtr0087245 3 2 2 138 2R 12083327 12083345 CACAATGCGCTACTTTCCA 58 12083148 12083226 CCTGTACATCGTGACATCCA 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 2 2 5 116 2R 12220627 12220646 AACTGGACACCTATGTGGAG 59 12214657 12220548 GTAGTTCGGTGTTGTTGGC 59 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 1 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 1 2 3 127 2R 12922402 12922422 GGAGAAACTAAATCTGGAGCG 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 2 2 9 80 2R 12957455 12957475 TGTATCGCTTGAGGATAACGA 59 12955712 12957417 GAATCAGACCTATTTGAACGACG 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 2 2 3 195 2R 12982552 12984740 TTGTTGAGGGAATTGCATTGAG 59 12982378 12982397 AGTAGAAGAGCGTGTAGCTG 59 NA InUTR Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 2 2 2 103 2R 13623909 13623927 CTTCGCTACTGCACTTGTG 59 13623769 13623845 TGCAGGATCAGATCCATAACTC 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 3 4 4 128 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020603 14021380 GAAACTTTGGCCATCCTTGG 59 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 3 3 3 84 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181822 14181840 TGTTTCGGGATGCTAAACG 58 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 1 3 4 87 2R 14524313 14524400 GGAAACTGCTGAAACTTCTACC 59 14524247 14524266 TTCATCGTTTGCCTGTTCTG 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 2 4 4 81 2R 14529689 14529707 CGAGTTGCAGTTGATTGGT 58 14529562 14529647 GTGGAATGATTGCATAATGCTG 58 NA Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 1 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587568 14587587 TGTTTGATAGTGTATCGCCG 58 NA Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086639 2 2 3 186 2R 14664324 14664411 CTTACACCAACAGACATGTCG 59 14664158 14664176 CGAAGACATGCAGCTTGTG 59 NA InUTR Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 1 4 5 94 2R 15024321 15024463 TCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 2 5 6 81 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049030 15049049 CACAATCTCAGCCTTCAGTG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 1 3 12 80 2R 15064178 15064196 ATTAGTCACAAGCAGTGCC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290314,FBtr0290313,FBtr0290316,FBtr0290317,FBtr0290312,FBtr0100282 1 11 12 154 2R 15061509 15061527 AAATGGAGCAGATCTAGCG 57 15061861 15062091 TCAACTCGACCTTAAATGCA 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 1 4 19 83 2R 15370534 15370552 TGCCCGATCAGATAATGCA 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0086460,FBtr0100392,FBtr0086457 3 14 19 106 2R 15365200 15366256 TTTCACTCTGGTCAAACCAG 58 15366325 15366343 GAGAAGAAGCTCATGCGAC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 1 5 19 96 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 3 11 19 82 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361018 ATTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301895,FBtr0301893 2 2 15 82 2R 16908770 16908788 CTTCGGATCACAGAACCAC 58 16909015 16910578 CCGTAACAATTGTCTGATGCT 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 1 6 15 93 2R 16907282 16907300 GAATGCCACGAAGAAGGAC 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 3 2 3 122 2R 17092792 17092871 CCGCCTTCAAACAGTTCAG 59 17092957 17092975 CATGAGCATACTCCGACGA 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 2 5 5 200 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546236 TTATCTCCGTGTTCCTCGTG 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680 1 1 2 80 2R 17557311 17557331 AGGATTACATGTCTGACACTC 57 17557190 17557270 AGTGATTCTTGGTCAGACAG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071851 1 1 4 177 2R 18195750 18198596 AGTGTACTATCTGGCCAGAG 58 18188394 18188412 AACCACAATGAGGAACAGG 57 NA InUTR Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071858 1 1 2 98 2R 18509794 18515311 AACGGACGACAGTTACAGG 59 18515373 18515391 ACAACGAGGGAGTACTGTG 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 3 8 8 102 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611606 18611625 AATGACACGTTGATCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573 2 1 3 81 2R 18664575 18664595 CAGTCACCATTTCTCCTATGG 58 18646897 18664535 CTTTGGTCCTAGATCTGTTGAG 58 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 3 4 4 139 2R 18693056 18693180 CCACTAAAGTTACAGTCAAGTCC 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 2 2 2 81 2R 18706463 18706938 GACAACGAAGATTTCTCGGTG 59 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 81 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484835 19484916 CGAGTACATGCCTTCATGC 59 NA Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 3 2 2 80 2R 19520720 19520739 CTACTATGGACTGTAGCGGT 58 19520780 19529774 GATCACCATGTGACAAATCGT 59 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 3 2 2 80 2R 19938184 19938203 GACGTTACCTTCATCGTGGA 59 19938246 19938326 GGGATGGGATACCACTTCG 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 1 3 6 121 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 1 4 4 80 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552190 20552385 CATAAACTCATTATTGGCCTGC 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 2 7 8 118 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878690 20878708 TTCATCCTGGACCGATGAG 58 NA Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 1 1 1 61 2R 7754868 7754886 TGAGTCTGAGGTCGTACGA 59 7754984 7755004 CCTCAGAACAAACTTGTTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352 2 1 3 121 3L 147066 148466 CCAATTGATCGCAATTACAAGC 59 148545 148566 AGGAGAATCTATTGTTCAGCCA 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352 3 1 3 122 3L 147066 148466 CCAATTGATCGCAATTACAAGC 59 148546 148567 CAGGAGAATCTATTGTTCAGCC 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 2 5 6 82 3L 352341 352362 GTATCTCGAGTTATCCGAAAGG 58 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 mth FBgn0023000 FBtr0301819,FBtr0072570,FBtr0301820 1 3 4 86 3L 344032 344117 TTGCAGGAGAGCATTAGGG 59 343964 343982 GACATTTCGTGTCGTCGTG 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 3 4 6 80 3L 982229 982248 CTGCATCTCTATGGTCTGGG 59 982288 983866 GTCGATCATTTCCTTGATCAGG 59 NA Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 1 2 3 102 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1269141 1269159 GAGGTAGTAGCGCTTCTCC 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716 1 1 4 80 3L 1424836 1424854 AAAGACGTGCGAAATACGC 59 1346434 1424795 CAGGTCTCACAAATTTCCTTCC 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716 3 1 4 108 3L 1346437 1424798 TGTGGAAGGAAATTTGTGAGAC 59 1346350 1346369 ACATCCCGATAGCGATTCAG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072703 3 1 3 82 3L 1528071 1529120 GAAAGATCATCATAGGCGTCG 59 1528009 1528027 CTTGTCCGGGAAGTAGTCC 59 NA Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072785,FBtr0072784 3 2 2 137 3L 1821295 1821313 AACACAGGACCCATAGCAC 59 1821413 1821819 TGGCAACACGTAGACATAGG 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0301465 3 1 3 199 3L 1945570 1945662 TCAAAGTTGCATCAGCGAC 59 1945334 1945352 ACGACTCCTGTTACTCACG 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857 1 1 4 97 3L 2119118 2125246 TCAATACGATCAAGGCACTC 57 2119040 2119058 TATTGACGCCATTACCCAG 57 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 1 4 4 70 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 3 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 3 3 3 89 3L 2723388 2723473 AGGCTATAGTGGTGAAGCAG 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0072977 1 1 2 80 3L 2962475 2962568 TAATGTTACCTCTGCCATCTC 57 2962604 2962628 GGTACATCTGTATATGATAGTAGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 2 5 5 86 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131026 3131120 TGGTTGAGAGTCGATATTATGGG 59 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 1 3 3 108 3L 3168167 3168185 CATGATCTGTCCATCGTGC 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 2 3 3 80 3L 3227694 3227782 CTACTTCTCCAGGGAGAACC 58 3227823 3227843 GTGTAAATGGGCACATACTGG 59 NA Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 3 2 2 170 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237507 3237525 CTCTTCGCAGATCTCCTCC 59 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073066 1 1 3 188 3L 3326704 3327870 ACCATGCAAATCGACATGTC 59 3328021 3328039 TAGATCCGTCAGCTTCTCG 58 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0073071 2 1 4 114 3L 3366206 3366224 AACAATCCGCCACTTTACC 58 3366302 3367162 GCTGAAGAACCCGATTGTC 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 1 3 6 122 3L 4095861 4097514 CGAAAGAGGAATACTACCAGTC 58 4095760 4095778 CATAGGGATTGTGGTGCAC 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 3 3 6 124 3L 4095861 4097515 ACGAAAGAGGAATACTACCAGTC 59 4095759 4095777 CCATAGGGATTGTGGTGCA 59 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370 1 1 2 88 3L 4811657 4812901 AAGATCACCGATGATGTTCGA 59 4811589 4811607 ATACTGGCGCGATTAACCT 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 2 4 10 83 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534358 5534445 TCGTTAATACCGTTATAGCGTC 58 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 3 2 6 134 3L 5763025 5764728 ATGGACATGACAATAACGGC 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 1 2 2 93 3L 6600094 6600113 CACCAACAGGATATTCAGCA 58 6600167 6600243 GAGAGGAATCTTGGCTATCTC 57 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 1 2 3 96 3L 6741026 6741046 AACTCCAATGGAAATCTCCAC 58 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 2 2 11 136 3L 7042665 7043671 GAATACGAAACGCTACGCG 59 7043770 7043789 GAGAGGAATGCCTTGAAGGT 59 NA Drosophila melanogaster 61 corn FBgn0259173 FBtr0299641 2 1 2 105 3L 7137236 7137256 CCTCGGTATTCTAAATCTGCT 57 7137098 7137169 AGATTGGACCTGAGTACCA 57 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 3 6 9 159 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157832 7157852 GGAATCTTATCGTTGTTCTGC 57 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 2 6 9 159 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157832 7157852 GGAATCTTATCGTTGTTCTGC 57 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 3 6 9 160 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157831 7157851 CGGAATCTTATCGTTGTTCTG 57 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691,FBtr0299693 2 3 3 60 3L 7322400 7322418 CGTATCGCAATCGATTTGC 58 7322442 7322460 CAAATGCCGAAGAGCACAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 3 5 5 133 3L 7365497 7365515 GCGAGAATCAGCTAAGGGA 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 1 2 2 75 3L 8177587 8177606 GTCTACTAATGGGCATGCTC 58 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 2 1 1 105 3L 8319395 8319413 TACTCCTTCAACTACGGCA 58 8319939 8319957 GCTCAACCAGGGAGTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114549 3 1 9 195 3L 8351808 8351960 TATCAGTTACGTCGTCGGT 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA InUTR Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 3 3 3 123 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624406 ATAGTATCGATTCGCCTTGC 58 NA Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 2 1 1 154 3L 9962329 9962347 AAGGCCACCCTTTATCTCG 59 9962974 9962992 CAACGACACCCACATAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 2 3 3 80 3L 10214547 10214565 TTCGGCATCAATTTCCCAC 58 10214224 10214506 CATGGCATCTATGAGGAATGTG 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113418 1 1 5 110 3L 10580989 10581771 TATTAAATCGCCGCACTGTG 59 10582468 10582486 ACAGCGGAGTCTTTAGCAG 59 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 2 3 3 173 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687661 10687679 GCACAGTATCTCTGTCCAC 57 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 2 3 3 97 3L 11051888 11051907 GAATGACTATGTGGCCAAGC 59 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0301967 1 1 5 86 3L 11109587 11109767 AATTGTCCGGCTAGTCCAC 59 11109453 11109542 CAGATCCTGTGTATTGTTGTTACC 59 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 1 3 3 85 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076138 3 1 2 80 3L 11617288 11617372 CGATTTATGTGGTGTCAGAAGG 59 11617229 11617252 CCCAATTACTGGAATCTCATTTCC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0301135,FBtr0076079,FBtr0076078,FBtr0110869,FBtr0110868,FBtr0302136 2 6 6 74 3L 11811380 11811400 GCAGCGATAAGGATAAGACTG 58 11811260 11811278 CTGCACGCAGTAGAATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 2 4 4 80 3L 11993787 11993865 TCAAGTTTAACCTGAGCGAG 58 11993726 11993745 GCTTCTTGAACTGAATTCCG 57 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 3 3 4 89 3L 11992086 11993380 TGCGTGAGATGTTCTTCGA 59 11992015 11992033 TGCCATTGACGATGAAGGA 59 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 3 3 4 89 3L 11992086 11993380 TGCGTGAGATGTTCTTCGA 59 11992015 11992033 TGCCATTGACGATGAAGGA 59 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076009 2 1 2 163 3L 12268281 12270002 CATATCCTTCGACACCATGC 58 12266682 12266700 AGACCACCTTGTCGATGTC 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 2 3 3 80 3L 12468728 12468750 GAGAGTGATGAAGAGCTATACAC 58 12468612 12468690 TTGGGTAACCTTAACAATGCC 58 NA Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 2 1 1 60 3L 12497722 12497740 CCGTGAAAGACAATCACGC 59 12497827 12497848 ATCATCAGGTTCATCAGTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 3 2 2 80 3L 12781722 12790795 CCTGGTCATGGAGTATTGCA 59 12781661 12781680 CTAACGGTATCCTCGCTGAG 59 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487 3 1 2 151 3L 13454981 13455002 GATGCAGCTGGAAATTATACAG 57 13455114 13455316 AACAGTTTGAGATTGGGCA 57 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075793 3 1 4 82 3L 13903681 13907076 TATACCTACACGAAGCCCAC 59 13903618 13903638 ACTTTCTTCAGGTAAACGGTG 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 2 2 6 149 3L 14219496 14223286 ATGAGCAACTGGAACTGCT 59 14223399 14223762 GTTCCGACTCTCGGTACTG 59 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 1 3 3 80 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621438 14621458 TCGTTGTTTATCATCTGCAGG 58 NA InUTR Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 3 3 3 81 3L 14981279 14981297 ACAATCCCTCATCGTTTGG 57 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 gdl FBgn0001099 FBtr0091757 1 1 1 60 3L 15502960 15502979 CTTACCATTCGGAACTTCCC 58 15503057 15503075 TCGGTGAGTAGATCGTAGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 1 3 4 80 3L 15504256 15505276 AGCTCAAGGATCTGAGCAC 59 15505318 15505338 CTTTGGTGACATTCACATCGT 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 3 3 4 84 3L 15815227 15815246 TACTGTATCCTCGAAGCGTC 59 15815103 15815182 GCTGACAATCTTCTCATTGCT 59 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 2 2 2 60 3L 16017000 16017019 AATGGATTAAGCCACAGCAG 58 16022392 16022411 TGACTGAACGTGGCTAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575 3 1 7 121 3L 16056828 16056994 GAAAGCGAAGCTGAGAACG 59 16057076 16057097 TTATTAGTGGGACTATCGCTGG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301472 2 1 7 108 3L 16059404 16059724 ACTTCTTCAAATCCTTTGTGCC 59 16059793 16059811 GTGACACCTTGGGTAGACC 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302781,FBtr0302779 1 2 12 80 3L 16859980 16859999 GACCAAGGAACTCATGAGTG 58 16860040 16877032 CTTATAATGGCACCCTTCTCG 58 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 2 2 7 115 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953720 16953738 ACATCTTCGTTAGCACGAC 58 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 1 2 5 80 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978437 16984130 GTAGTGGTCTGAGTCATCCT 58 NA Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 2 4 4 82 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391564 17391586 CAGAATGGAGTTAGAAAGGTCAG 59 NA Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 1 2 2 80 3L 17885509 17885528 GTGACGACCAACTTCATCAG 59 17885374 17885468 GCCAAAGATCATCAGTATGGC 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 3 2 4 144 3L 18668070 18668329 GTCCATACCAGATGAGCCT 58 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 2 2 2 80 3L 18796089 18796172 GCTTAACAAGCTCTGTCCG 58 18796027 18796047 TCATCTATCTTGAACTCCCGT 58 NA Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035 3 1 2 100 3L 19063194 19078436 GTAGTTGCTTTACAAGATGGCT 59 19063115 19063136 CGACTAGATTCGATCTCTTTGC 59 NA Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0074994 2 1 2 95 3L 19269802 19272148 GTCTGCTGACTTCATTCGC 59 19272206 19272495 GGTAATTATCCTCTGCGCAC 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 3 3 6 116 3L 19685465 19686090 GTGTACAGATGTACCAAGTCG 58 19685369 19685387 TTTCTCGTCGCAATTGGTC 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 1 6 6 143 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684743 19684913 ATCCTCATCGACAGAGCAG 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 2 5 5 80 3L 19795876 19795894 ATAAGCTCATTTGGACGGG 57 19795938 19796013 AACCAAGAAGAACTGGGTC 57 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920 3 1 2 85 3L 19890505 19902357 CCACAAATCCATGCAGAGTG 59 19890439 19890457 ACTGTGCAAGCGTATACGT 59 NA InUTR Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917 3 1 2 125 3L 19913349 19913367 TTAGCACCCTGGCTAACAC 59 19912379 19913264 GCACTGTATTATCTTTGGAGCTC 59 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 3 3 3 97 3L 19992458 19992476 AACATAGCTCCGAAAGGAC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 CG5618 FBgn0036975 FBtr0273280 3 1 2 90 3L 20347425 20347443 AAGGAGGATACCTTCTGCG 58 20347491 20348414 GTAGGTGTATCTTAAGTTTGTCTGG 59 NA Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 2 5 5 111 3L 21192061 21192083 GGATGGTAGACATATCTACAACC 58 21191820 21191990 GTGCTCCCTCATATGTTCC 57 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 3 2 2 110 3L 21513429 21513511 TTACGGACAGGTTTACAAGG 57 21513584 21513602 TCACGAACAGCTGTAATGG 57 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 ORMDL FBgn0037110 FBtr0078423 3 1 1 72 3L 21628842 21628860 AGTTCCTCACAGCTGTTCC 59 21629112 21629131 AAGTGTTCCGTGTTGTTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 2 2 2 72 3L 21807935 21807954 ATTTACATGTGAAGGCTGCA 58 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078494 1 1 3 97 3L 22263005 22264018 GTATTCACATCTGAATCGCCC 59 22264658 22264676 CGTCTAGGTCAACGTCCTC 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 1 2 3 112 3L 23734176 23739299 ATTGGACAGGGATCCTACG 58 23739375 23739393 ATAAGACCAGCTTGACGCA 59 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167 2 2 3 113 3L 23734175 23739299 AATTGGACAGGGATCCTACG 59 23739375 23739393 ATAAGACCAGCTTGACGCA 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 3 3 4 80 3R 162242 162260 AATTAGACCAGGTGCCCTC 59 162120 162199 GGCTCCTGGATACTAGTCTG 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 6 10 105 3R 569891 570196 CGATATGGATACTCAACTGAAATCC 59 569810 569830 CTCTAACTCCGATCGATCTCC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 6 10 105 3R 569891 570196 CGATATGGATACTCAACTGAAATCC 59 569810 569830 CTCTAACTCCGATCGATCTCC 59 NA Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 3 2 2 107 3R 992799 992887 CAATCGGAACACGATTGGT 58 992958 992976 TGCAACTGCATAGAAGCTG 58 NA Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 3 2 2 120 3R 1062887 1062963 GATGATGACATGAGCAGCG 59 1062785 1062803 TGTACTGGCTTTGACCCTG 59 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 3 3 3 90 3R 1210575 1210672 CAACAAAGACTTGGGTCGG 59 1210503 1210522 ATATGCTATGAGCAGAGCCC 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078684 1 1 3 93 3R 1312525 1312543 CCTGTAGTGGAGGAAATGG 57 1312600 1312793 GTATGCACGTTTCTTGTGG 57 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 2 3 3 80 3R 1392111 1392200 TTACCTTCTTCAAGTTGGAGAC 58 1392240 1392259 TTGGGTTCTTGTATAGCCAC 57 NA Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 1 1 1 76 3R 2125196 2125214 GTGGAGTCACCTTCCAGAG 59 2125720 2125738 ATAGACATCCTGCTCGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 1 2 2 91 3R 2269950 2269969 TGGACATGGTCTTAGTCACG 59 2270023 2271265 AATCGTTAACATCGTCGGC 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 2 4 11 87 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494,FBtr0300495,FBtr0113199 3 3 9 112 3R 2922690 2922711 GCAGTAGTAATCCTACAAGCTC 58 2922533 2922617 AGACACGTGTCTCATTCCC 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 1 5 5 93 3R 3697632 3697746 GTCAATTTGTTGGAGCGAC 57 3697557 3697578 GATCCTATAATAAACTCGTGCG 57 NA Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 1 2 2 82 3R 4060875 4060893 TAAGCCAATATCCGTGCGT 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 1 1 1 111 3R 4632215 4632233 AACTCAGAGATGAGGCCTG 58 4632361 4632379 TTCCAACGTTTGAGCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 2 2 4 95 3R 4766831 4766852 TGAATCTGTATGACCTGTTCGT 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 3 6 6 82 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838910 4838930 GTAGTCATAGCAGATCAAGCA 57 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 2 6 6 81 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838911 4838931 TAGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 1 2 14 96 3R 5260133 5269739 AGCTTTGTTCGAGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 2 2 14 96 3R 5260134 5269741 GCTTTGTTCGAGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082096,FBtr0082097 1 2 4 98 3R 5515590 5516164 TTAGCGAGATGCACTACCG 59 5515510 5515528 AGCTGTAGGTGTAGATGCG 59 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 3 3 3 85 3R 5590340 5590415 TAACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 2 2 6 137 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930607 5930626 GTGCGACAGATGATACTCCA 59 NA Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 1 2 2 84 3R 6706821 6707298 GGAGCATGATACTTAAATGCCA 59 6706758 6706776 TTCGTGTGCGTATGTTTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 1 3 5 81 3R 7048437 7049125 CTTCTACAAGAACTGGTACAAGAG 59 7049165 7049183 CTTCTTGCCGAGATCATCG 58 NA Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 2 2 2 110 3R 7326957 7329141 CCAATACTTCGGCCATCTG 58 7329215 7329233 GCAATAACCTCCCGATCTG 58 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100462 3 1 4 267 3R 7387975 7387993 CATCGCCACTTCACTTCAC 59 7386731 7386750 CATACTCGGTGGGATAGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082470 2 1 4 90 3R 7614735 7614807 GACCTAAAGTCTGCACTACAG 58 7614858 7614877 TATAAATGGCTGTGGCATGG 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 3 2 6 81 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628403 7629449 CGACCATACATATAGTAGAACGC 58 NA Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 3 2 2 89 3R 7650662 7663897 ATCATTTGAGGCTTCAACAACC 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 2 3 15 189 3R 7815238 7818476 CATTCTACGGCGACTTTATGC 59 7815069 7815087 TGAGATGAGTGGAGTTGCG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082493,FBtr0082500,FBtr0082495,FBtr0082494,FBtr0082502 2 5 15 148 3R 7815047 7817812 AGTCCTCAGATAACTCCAGC 58 7814508 7814937 GATGGTGTCCACATTGAACG 59 NA Drosophila melanogaster 61 Cyp9f2 FBgn0038037 FBtr0082599,FBtr0082598 1 2 2 80 3R 8229419 8229442 GATGAGAACAAGGAGTCTATTCAG 58 8229305 8229380 GAATCGGGAACCAATGCAG 59 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 1 3 4 82 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338673 8338692 GATCCAGAATAACACCACCA 57 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 3 2 2 80 3R 8484656 8484733 TCCTGTGATTAAGTCATACGC 58 8484773 8484793 ATGCCCAGACTAATCTTTGAG 57 NA Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 2 2 2 80 3R 8866925 8866943 GTCCCTGTCATCTGTTGTC 57 8866807 8866884 ATTGTACTCCTGACATTTGGTG 58 NA Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 2 2 2 80 3R 9125275 9125295 AGATGAAGGATAAGCTTGTGG 57 9125336 9125489 TCGTCGTAGAAATGGTTCTG 57 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082856,FBtr0082855 2 3 4 106 3R 9468919 9471482 GACGACAGGAAACTGTTTGTC 59 9468768 9468788 GTCTTGACATTGATGCTCTCG 59 NA Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 2 2 2 84 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707626 10707644 TCGATCGATGATTTCCGTG 57 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 2 2 3 81 3R 11240682 11240830 GCCGTAGTAATTACCCTCCA 59 11240874 11240892 GCTGTTATCAACGGCTGAC 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 3 7 7 85 3R 11626012 11626193 ATCTGCGGGAGTCTTACAC 59 11626242 11626260 TAGCAATCGCTGGTAGACC 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 5 5 82 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723137 11723282 TTTCAGTTGGTTGTAAGACTCC 58 NA InUTR Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 4 5 196 3R 11723423 11723506 GGAGCTAAGTGGAAATGCT 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 2 1 1 101 3R 11849428 11849446 AATCCGAATCAGACCTGGT 58 11849839 11849857 GTCTGGTTTCGATTGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221 1 1 2 155 3R 11860814 11864312 CTGAGTGATGGCGATTCCA 59 11864430 11864449 ACTGTGGTACATCTTGACGG 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110973,FBtr0110974,FBtr0083229,FBtr0083231 3 4 6 98 3R 11914471 11914489 CTTATCGACAAGGCACCTC 58 11914331 11914409 TTCCTCATCCAGTAGCCAC 58 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 1 3 3 89 3R 11928091 11928112 AGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 3 2 2 72 3R 12260750 12260768 TACATTGGTCACCTGGTCG 59 12260864 12260882 AATTAGCAGTCACCTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 1 2 2 60 3R 12398521 12398542 TCAGAACTTTACAACGCTACAC 59 12398561 12398581 CAGAAACTCCAAGGTAGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0112803 1 1 6 89 3R 12451897 12451915 GATTTGGCGGACAAATTGC 58 12455311 12457339 GCTGTAGAACCTAACTGGC 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 3 5 5 81 3R 12755407 12755426 CAATGCGTATGTTTCCAAGC 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302852,FBtr0300053,FBtr0300361 3 3 4 92 3R 13044801 13044891 TATCCATCACTTTGTATCGGGT 59 13044730 13044754 TGGCTACGATAATGAGATAGTACTG 59 NA Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 3 2 2 89 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216839 14216858 TTTCCAGAGAATCCTGTGGG 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 3 5 6 81 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 2 2 4 125 3R 14844196 14846660 GGTGAAGAAGGGTATCAACG 58 14846748 14846766 CAGTGTCCAATAGATGGGC 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110915 1 1 8 83 3R 15352882 15352900 AACGGTTTCCAGATCCTCG 59 15352945 15380548 TTGTAGGTCCTGACTCAATCG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301379 3 1 7 108 3R 15590036 15590054 TCCTATACGAAGGCCATCG 58 15590126 15590283 ATGTGGTTACTGATCGGGA 58 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 3 2 5 151 3R 15842344 15842362 GACATTAAGGAGCGAACGG 58 15842474 15842563 CAAGAGATTGCCTATTCATCCT 58 NA InUTR Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 3 2 5 151 3R 15842344 15842362 GACATTAAGGAGCGAACGG 58 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 1 2 3 82 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873435 15873529 CAAATCCACCCAACAGAAAGG 59 NA Nonspecific Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 2 2 3 82 3R 15873439 15873531 TCTGTTGGGTGGATTTGCT 59 15873577 15873595 CAGCGAATGCTAAGGACTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 2 2 8 80 3R 16146586 16147206 GAACGTGAAGGATTTGGACG 59 16147249 16147267 GATTCGGATTCCGACTCCA 59 NA Drosophila melanogaster 61 CG4288 FBgn0038799 FBtr0083888,FBtr0083889 2 2 2 89 3R 16333759 16333777 CTATTTGCTGGATCCCACG 58 16333615 16333708 TGATTAACGGCAAATCCAGAC 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 3 5 5 170 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396955 16396973 AATGCTCTCCTTCACGGTC 59 NA InUTR Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 1 2 2 80 3R 16457277 16457295 CTGGACTACGCCTATCCAG 59 16457014 16457235 GAGCAAGTCTTCGTCTTTCAG 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255 3 1 8 191 3R 16623323 16623342 CTTTGAGGATCGTGATAGCG 58 16623565 16624021 GTTTCAAATCCCACGATCCC 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718,FBtr0299720 1 2 3 81 3R 16679650 16679668 CTCCGATGAGGAATGGGAG 59 16679381 16679608 CAGGAATTCCTTCATGTACTCC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 3 6 16 107 3R 17027954 17027973 GATCCAAGAGCTTGGATGTG 58 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 CG3301 FBgn0038878 FBtr0084100,FBtr0084101 1 2 2 100 3R 17101292 17101368 AGATCACGAGCATCAGTCC 59 17101210 17101228 TATATCCTCCGATCGCAGC 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 3 2 2 79 3R 17841000 17841018 CTCACGAATATCCAGCCGT 59 17841134 17841152 TACTTCTCGTGCTTAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0290271 3 1 2 81 3R 17847984 17848136 CATCACCTACGCCAAATACG 59 17847922 17847940 CACCTTGATGACGGATCCT 59 NA Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 1 2 2 87 3R 17911578 17911964 TGCTACGACTGTAATCCACC 59 17911510 17911528 CGTTGTATCCACCTCCTCC 59 NA Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 3 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0301029 3 1 3 111 3R 18209069 18209179 TATGCAACACGATGAGGCT 59 18209308 18209326 TAGCTCGTCCCTTTCATGG 59 NA Drosophila melanogaster 61 EloA FBgn0039066 FBtr0084375,FBtr0084374 3 2 2 127 3R 19079152 19079170 CAGACAGTTATGGACGTCG 58 19079261 19079337 GAATAGATCTTGGTGCGCA 58 NA Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 1 1 1 164 3R 19237992 19238010 GTGGTACGAGAACCAACAG 58 19237715 19237733 TGTTGTCCTTGTCCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 1 1 1 100 3R 19758875 19758893 CACCAAGGTCTATAGCGGG 59 19758723 19758741 CTTCCAAGGCTTGAAGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113277 1 1 4 84 3R 19816967 19817778 TCCAACTCAACCATCTCACTC 59 19816903 19816921 CATTAAACTGTGCCTGCGG 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 2 2 7 88 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984968 19984986 CAACTGGAGATCAGCTCCT 58 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 6 6 80 3R 20025043 20025062 TAAGACTATGTCCGAGCTGG 58 20024921 20025002 TTGATCAGCGTAAACTTGGAC 59 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084558 1 1 4 96 3R 20047638 20048078 GCTACTATGTGTTAATATGTCGGG 59 20048133 20048151 TTCTTTGAATTGCGCACGA 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 3 4 6 120 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079743 20079761 CACAGGACGTGTTGATAGC 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 3 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527819 TGGTGTTCATCTAAGTCATCGA 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 1 5 6 87 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 XNP FBgn0039338 FBtr0084838,FBtr0084837 3 2 2 92 3R 21305993 21306115 CAGAGAATATTACTGCATGATCCAG 59 21305925 21305943 TTGGTGATTGGGTTGACGA 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 2 2 5 145 3R 21711423 21711441 TGCTGCTGATAGTCTACGG 59 21711547 21711618 CGCTGTGAAATACAGATTTGGT 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139 2 1 5 80 3R 21735838 21735856 TTTCGGGAGCTATTTCGTG 58 21735898 21742832 TTTCGAAGTACTCATAGGTGG 57 NA Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 2 2 2 60 3R 21882130 21882149 TGGAGGATGAGGATGATGAC 58 21882029 21882110 ATGATTTCCAGAACCTTCTGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 2 4 10 115 3R 22416344 22416362 CGATAATGACGACAGCGAC 58 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 3 2 3 108 3R 22788799 22788894 TTCAGCTTCACTGAGTTCG 57 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137,FBtr0085138 3 2 12 89 3R 22892390 22892410 ACGATACGTTCGTATCTTTGC 59 22892194 22892340 AGACAAAGGTATCCGATGGA 58 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 2 5 5 80 3R 23392252 23392335 CCTTGGCAGTATCATCAACG 59 23392191 23392211 AGTGGCAATAGGACCTTAACC 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582,FBtr0112583 2 3 3 130 3R 23904347 23908636 GAGTAAAGAGAACATCAAGCCG 59 23908727 23908745 TCTTCTGGAGGACCTCCTC 59 NA Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 3 3 3 97 3R 24852820 24852840 TCAAATGCTCTAAGCTTGACC 58 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085377,FBtr0301651,FBtr0301650 1 3 10 99 3R 24959595 24959614 GTAAACCAAACGACCGAGTC 59 24959676 24960289 TCTCCATGTAACCGAGCTG 59 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 1 2 2 80 3R 24989870 24989951 AACGTTGATCCAGAAACCG 58 24989992 24990013 GGCTATAGTCAATACAGTGCAG 58 NA Drosophila melanogaster 61 CG7609 FBgn0027518 FBtr0085543,FBtr0085542 2 2 2 92 3R 25570535 25570612 GAAGAAGCTTGCTTAAGGTG 57 25570462 25570481 CGGAGTAGCTAAGATTCTGG 57 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 2 1 1 154 3R 26038011 26038029 ATTGGACAATCGGAAGCTG 58 26038203 26038223 GATAGTCATCGTGGTTAACCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 8 13 154 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419562 26420548 AGTAGAGTTTCTGGTCGGT 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 2 5 13 99 3R 26419560 26419843 GACGCCTAGAAACTCTACTCC 59 26419481 26419499 GACCTTGACAATGTGCTCC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 2 2 2 95 3R 27815038 27815113 GATTCCTAAGACGGTGCCA 59 27815172 27815190 ACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0089116 3 1 7 84 4 255555 257026 ATCGCCAATTAAGCCTAATGTC 59 257068 257089 CGAATCATGGTCTGCTTTAGTG 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 2 2 4 107 4 585200 585218 TCTCAAATCGCTTTACCGG 58 585286 586054 CGGTAAATCTCCTTTAAACCCT 58 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 1 2 3 83 4 660267 660287 GATTTGGCTTCTCAAACTGAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 1 6 7 80 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080448 1081043 TCTGCTTGATGGAACCTGAG 59 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 2 4 4 121 U 1092306 1092325 CAGATCTAAGTTGCGATCCT 57 1092151 1092224 GTAAAGAGAATTCACTGCTCG 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 1 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 3 2 3 99 X 1924317 1924336 GTCCAAAGACAATCCTCTGG 58 1923949 1924258 GTTGATCAAATCATCTGGATCC 57 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 2 3 3 104 X 2038239 2038324 GTTCAAGTTCCTGAACTCCC 58 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 3 3 3 88 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678711 2679044 CCAGGATTATCTGCAAATAGCG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301823 1 1 7 89 X 3593512 3593730 CGACAAAGTTTGTCTGGCA 59 3593780 3593801 CCTGCATCGAATAGAATTGTGG 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 2 3 3 82 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037711 4037731 CTCGCACATTACCACATAGTC 59 NA Drosophila melanogaster 61 CG3009 FBgn0029720 FBtr0300468,FBtr0070688,FBtr0300469 1 3 3 129 X 4554208 4554298 ACAGATCGTGGTGATATCCAG 59 4554099 4554117 GAAACTCGTGGCCATAGGA 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 2 5 5 113 X 4962727 4962745 AATCTCTGCGAGAAGAGCT 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 3 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301953 2 2 7 82 X 5277608 5277626 GGGAACGGTTCTATTGGTC 57 5277669 5288096 CATCATGAAATCTTTCGCACTG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 3 5 7 103 X 5277589 5277610 CTCTAATGACAATATGTCCGGG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 3 2 2 153 X 5964445 5964465 TCCTACGAGGATTGGTATGAC 58 5964222 5964330 ACGGATTCTCAGATCTGCC 59 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 1 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301240 2 1 2 152 X 7111914 7126407 AGGAACCAATTCCGACTCC 59 7126523 7126541 CACTGGCCATAGTTCTCCT 58 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 2 3 3 141 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766823 7766841 CAGAATCGAGTAGGCTGGG 59 NA Drosophila melanogaster 61 fs(1)h FBgn0004656 FBtr0071120,FBtr0071118,FBtr0301309,FBtr0071122,FBtr0071121,FBtr0071119 3 6 6 116 X 7944307 7944478 CCAAGAAAGATGAGTCCGC 58 7944209 7944227 TCGAACTGCTATCACTCGA 58 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 3 3 3 97 X 7991393 7991475 ATCATCAGGATTATTTGGGCG 58 7991316 7991334 CAAGGCAATGACCATGTCC 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0089974,FBtr0089977 2 3 7 99 X 8111097 8117668 CTAAAGCAATGGAATCGCC 57 8117731 8117749 GCTGACCGCTTATGTAGTC 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352 2 1 5 80 X 8993398 8993416 TTGACCAACAATTGGCGTC 59 8992436 8993359 CTTGTCCTGATCTAGCATATAGTG 58 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071297 1 2 6 106 X 9006200 9006218 TTTGATCACTGGCGTTACG 58 9006798 9007691 CCAAGTTCGGCACAATCTC 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112753 2 2 3 136 X 9222618 9226495 AGTGCGAAGATCTAACCCG 59 9222500 9222519 ATTCGTAATAGGCAGCTGCT 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 2 2 3 84 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859793 9859880 CAATGTCTAGGAATCGAGATGC 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 3 2 4 85 X 9893262 9893282 GAATCATTGATAGCCGATCGC 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 3 2 4 80 X 10120335 10120353 CCCAGTCTGACCATATCCG 59 10120395 10120558 ATGGGCATTATCATAGGTGGT 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 1 4 4 80 X 11055737 11055819 GTTGTGGTCACAAAGACGG 59 11055861 11055881 CTGGATGAAGTCAAAGTGCTC 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 3 3 4 119 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055181 11055199 AATGAGTGTCGTCTTTCCG 57 NA Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 3 2 2 81 X 11126737 11126755 ATCCAACCTTATACGCCCA 58 11120101 11126692 TGAACAAAGTCCTCGAAGC 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073558,FBtr0100540,FBtr0299569,FBtr0073561,FBtr0073560,FBtr0073562 1 6 6 95 X 11688955 11688975 CTATTTCGGCACTGGATTTCC 59 11689028 11689146 CCATATAGCCTTGGAACAAACTG 59 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451 2 1 2 122 X 11775925 11777229 GACGATGAGACATACAGACG 58 11775822 11775842 CAGATTCGCCTCAAAGATCTC 59 NA Drosophila melanogaster 61 Ir11a FBgn0030385 FBtr0073673 2 1 1 71 X 12271382 12271400 AGACTACCTGGGAGTACAC 57 12271220 12271238 GAAAGATGAAGACCTGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32647 FBgn0052647 FBtr0073703,FBtr0073702 1 2 2 102 X 12670825 12670913 AAACTGTACCAGGAACGCA 59 12670741 12670759 GCATTATGGTGGACATGGC 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0112849 1 1 4 80 X 13094934 13095647 ACAAACCAGGATGCATGAG 58 13094872 13094890 CGACTCCGCCAATATTTCC 58 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 3 5 5 60 X 13230406 13231549 AAACAAATCCAGCCATGGT 57 13230364 13230383 TTGTTTATGCACTTCAAGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 83 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268334 TATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 tth FBgn0030502 FBtr0073849 3 1 1 111 X 13509719 13509737 CGTCGTCAGTACTTGAGCA 59 13509370 13509388 TGCTCAGTCCCAGATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33239 FBgn0053239 FBtr0300088 3 1 1 60 X 13951617 13951635 AGTGAACTGGCAACATGTC 58 13951518 13951536 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943 2 1 2 170 X 14485111 14496503 ACGCCAATGGACATAATGTG 59 14484960 14484978 GGTGAACAACGTGGTTCTG 59 NA Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 1 1 1 60 X 15627746 15627764 ATACACTGCAGTAAGCCAG 57 15627547 15627565 GAGGAATGCTATTCGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 1 2 12 81 X 15793038 15793056 CTGGAAAGCATCCTTCCTG 58 15793101 15793488 CTCTTGTCCTTCCTCATCG 57 NA Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 1 2 2 92 X 15821908 15821992 GGCAAGATCGGAAAGAGTG 58 15822045 15822066 AGATGGTATAGGACTCATTCGA 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 3 5 5 84 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074370 1 1 7 89 X 16588375 16588658 AAGCATGTCACTAGCAGCT 59 16588304 16588322 TTGTGTTGCAAGTTGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 1 2 4 84 X 16602744 16602763 TATCCGTACGACAATACGCC 59 16603311 16603421 AGTAGGTCTGGAACATCGC 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 2 3 5 81 X 16717174 16717194 TCGTGCTAATCTGCTTTATCG 58 16717237 16717635 GTCGATTTAGGCCAGTCAC 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0074420,FBtr0074422 3 2 6 175 X 17156845 17156863 AGTATGATGAATCTGGGCG 57 17157001 17163972 GTATTGGCGCAAATATCCAC 57 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443 3 1 3 118 X 17183061 17185292 ATTCCCAACTTGGATGCCA 59 17182961 17182980 TACTCGTCAATCATTTCGCG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 1 4 4 101 X 17743515 17743534 TCATAATCATCTGGCTGGTG 57 17743365 17743451 ACTTGTAGACCAGCCTAGG 58 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300974,FBtr0300969 3 2 6 80 X 17784698 17790570 TTCACCCAGGCATATAGCA 58 17790614 17790632 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 3 2 2 81 X 17992531 17992620 GTGAATGATATACCTACACTGCC 58 17992472 17992490 AGATCTGACGTTCCAGCTG 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 2 3 9 85 X 18267160 18267178 ATGCAGAAGGTGGTCTACG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074594 2 1 2 93 X 18409636 18409654 GTGAGCAGATTCTGGAGCA 59 18409709 18411791 GGATTGCTTAGATGCTTCTCC 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 1 2 5 81 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455758 19455779 TGGGTAAATTCCAGATCAAAGC 59 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 3 2 2 81 X 20347079 20347097 GTGAAGCTGGAGATCAAGG 57 20346946 20347037 CAAGTTCTATCACATTGTGCTC 57 NA Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 2 2 2 107 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412949 ATAGTGCCATCCATGACCTC 59 NA Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 2 1 1 122 X 21064934 21064952 AGTGCGTAACATCATCTGG 57 21065151 21065169 TAATAGGCTCTGCTCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678 2 4 5 99 X 21221794 21221812 GACAGCTGATGATGCACTG 59 21221875 21222902 ATGCTTGTACTCGCTCCTG 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0089679 1 2 5 193 X 21223907 21223926 GCGGAAGTACAACTTTACCA 58 21224082 21225130 ATCATGCATATGCTGCTGG 58 NA Drosophila melanogaster 61 snmRNA:430:CR33735 FBgn0053735 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33733 FBgn0053733 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Ab FBgn0011932 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30407 FBgn0050407 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C3420b FBgn0083989 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3277a FBgn0063375 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U31:54Ec FBgn0063379 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32312 FBgn0052312 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-263b FBgn0067721 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-277 FBgn0067715 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S7:12Eg FBgn0011983 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:MeU6-A47 FBgn0025882 FBtr0077222 2 1 1 62 X 21257930 21257948 AAACCACAAATGCAGGGAG 58 21257886 21257904 ATTAGTTGCTGGTCATGCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1518 FBgn0031149 FBtr0077264 2 1 1 99 X 20923997 20924015 CATCGACATACGGAACGTG 58 20923818 20923934 TCCAGTGCTGTGTATCTCC 58 NA Drosophila melanogaster 61 NPC1b FBgn0031140 FBtr0077239 1 1 1 80 X 20807139 20807314 CCGTCAATCAGACATATTTCAC 57 20807352 20807373 TTAGGAAGTTATACTCGAAGGC 57 NA Drosophila melanogaster 61 Obp19a FBgn0031109 FBtr0077300 1 1 1 124 X 20286981 20286999 CAAGTATCCGAAGGTCAGC 58 20287087 20287180 TTCCCTTCTTGATTGCCTG 57 NA Drosophila melanogaster 61 CG42582 FBgn0260872 FBtr0301571 1 1 1 60 X 20024912 20024932 ATGTCCAATGTCTAATGTCCC 57 20024872 20024890 CAATGTCCGTCGAAACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12237 FBgn0031048 FBtr0074761 1 1 1 61 X 19536353 19536371 CATCAGTGACTCGAACAGC 58 19536310 19536328 AATCGGCCAAGTTATGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14221 FBgn0031042 FBtr0290086 3 1 1 86 X 19513565 19513583 TTAACGGTGACAATCCGCT 59 19513414 19513517 TCTTGTCGGTAGGAACATACG 59 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 2 2 2 80 X 19413854 19413944 AACATTATGCGCATGTCCG 59 19413792 19413811 TTCGAACTGGATTTCTGGGA 59 NA Drosophila melanogaster 61 CG34329 FBgn0085358 FBtr0112531 1 1 1 60 X 18944722 18944741 GGTTCGTGCAATATCATTGG 57 18944764 18944782 CGCCATAGTTTCCAGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32544 FBgn0052544 FBtr0074644 1 1 1 160 X 18754364 18754382 GGAGAACACCAGCTACGAG 59 18754557 18754575 TCTCGTCTTGTTGCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6123 FBgn0030913 FBtr0074578 2 1 1 95 X 18250022 18250040 GTCGCTATAAACACGACCG 58 18249019 18249965 GTTCGATTGCATTAATGCTGG 58 NA InUTR Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 1 2 2 80 X 18055281 18055301 AGTTGAAACAGGATACCATCG 58 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 CG32554 FBgn0052554 FBtr0074467 3 1 1 61 X 17746311 17746329 TCTGGATGTACCCAATGGC 59 17746268 17746286 ACACGAGCTTGACTTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487 3 1 2 108 X 17519639 17519662 GTGATATCCAAGATGCTAAGATGC 59 17518230 17519573 GTTTGCAGGAATACGTAGGC 59 NA Drosophila melanogaster 61 CG12432 FBgn0030843 FBtr0074433 1 1 1 99 X 17428177 17428197 CATATCATCTCAAGCAGCTGG 59 17428041 17428116 TCATGATGCAGGTGGACAG 59 NA Drosophila melanogaster 61 p-cup FBgn0030840 FBtr0074437 2 1 1 83 X 17341076 17341190 CGAATTAGCCAGAAGCTAGAG 58 17341013 17341034 CTCAAACAACAAATAGGATCGC 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 3 4 6 87 X 17165360 17165379 AATCACGGAGCCAAATTGTC 59 17165429 17165530 CATTCAGGCACTCAACCTG 58 NA Drosophila melanogaster 61 RpS5a FBgn0002590 FBtr0074406 3 1 1 189 X 17039108 17039126 GACTCCACCCGTATTGGAC 59 17037792 17038658 AGTTGGAAGATCCCTTAGCAG 59 NA Drosophila melanogaster 61 mei-218 FBgn0002709 FBtr0100640,FBtr0100639,FBtr0299823 3 3 3 80 X 17035062 17035080 TTTCTTGCGCAACGATGAC 59 17034937 17035019 GATGGTATGGTGCCTATGGA 59 NA Nonspecific Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 1 2 2 113 X 16999009 16999523 AAGTTAAGTCGGAGGTGGA 58 16998914 16998932 TATAGAGCTCCTGCTGACC 58 NA Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299578 3 1 2 153 X 16917167 16917185 TATTGGATGACCTCACCGG 58 16917302 16917655 AGGTCGGTTTATTTCGCTC 58 NA Drosophila melanogaster 61 CG4420 FBgn0030753 FBtr0074278 2 1 1 86 X 16337942 16337962 AATATCCAGGATAACATGGCG 58 16338007 16338092 CACTTTGCAGTTGATATAGAGC 57 NA Drosophila melanogaster 61 CG9981 FBgn0030746 FBtr0074304 3 1 1 80 X 16297174 16297192 GCTCTAAAGGAGGGATTGG 57 16297041 16297132 CCTTATGACAGTTACTCTGGC 58 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 3 2 2 113 X 15743035 15743177 CGGAATTACCTACATCCAATACTC 59 15742945 15742963 GTGAACTTCACATGGCTCG 59 NA Drosophila melanogaster 61 CG32581 FBgn0052581 FBtr0113439,FBtr0074184 1 2 2 104 X 15691534 15691554 GGATTTCACATGTCTTTCGGT 59 15691385 15691472 GTGTAGCCTTCTAATATCAGCAG 58 NA Drosophila melanogaster 61 CG8191 FBgn0030675 FBtr0074083 3 1 1 60 X 15627005 15627023 TTGCCTACCTAATCGACCA 58 15627045 15627065 TGCATCTCATCCAAGTCTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8184 FBgn0030674 FBtr0074082 3 1 1 80 X 15620696 15620775 CAATGCCTTATCAAGGTTCCA 58 15620816 15620835 CTCGCATCATACCAAATGGA 58 NA Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 2 2 2 83 X 15293118 15293253 GCCTAATGGTATACGACGAC 58 15293054 15293074 GTATCAGCGCTATCATATCGA 57 NA Drosophila melanogaster 61 CG9114 FBgn0030628 FBtr0074020 3 1 1 95 X 15225598 15225616 TTTCAGTTGATCCAAGCCC 58 15225465 15225485 GATGTTGGAAGACTGAAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10992 FBgn0030521 FBtr0073838 1 1 1 140 X 13674680 13675206 TACGGATCTAATCAGGGCT 57 13674558 13674576 ATAATCGACGGTGTAACCG 57 NA Drosophila melanogaster 61 Cpr12A FBgn0030494 FBtr0073784 1 1 1 87 X 13438041 13438059 TATGCCTATCGGATGACCG 58 13438110 13438535 GCGTGATCGACTGATTCTG 58 NA Drosophila melanogaster 61 comt FBgn0000346 FBtr0073754 1 1 1 106 X 13153747 13153838 AAGAAGACTGTCTCCCAGG 58 13153908 13153926 TTGAAGACCAGTGATTGGC 58 NA Drosophila melanogaster 61 fne FBgn0086675 FBtr0073712,FBtr0113493 1 2 2 80 X 12837476 12837560 TATTTCTGGTCTATCGAAGGGTG 59 12837600 12837618 TTCAACTCCTGGATGGCTC 59 NA Drosophila melanogaster 61 CG15728 FBgn0030409 FBtr0073674 3 1 1 100 X 12521554 12521572 TCCATCATGAGGACACGTC 59 12521635 12521718 CTGGTGGATATGGCTTTCCT 59 NA Drosophila melanogaster 61 CG2556 FBgn0030396 FBtr0073652 1 1 1 90 X 12409792 12409867 TAGGAATGGAAACGAGCAG 57 12409921 12409939 ATTGCTGATTCCATTGGCT 57 NA Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 3 1 1 139 X 11626503 11626523 TCTACTACCTGTTCATCTGGG 58 11621394 11626403 TTATCCAATTCCGGTCACTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1537 FBgn0030260 FBtr0073394 2 1 1 97 X 10956485 10956718 ACATTCGCCGTAACATTAACC 59 10956408 10956426 ATAGGGCTTCTTCAGCTGC 59 NA Drosophila melanogaster 61 CG16922 FBgn0030254 FBtr0073389 3 1 1 60 X 10850596 10850614 CCAGTAGTGGATCCGTCAG 59 10850638 10850656 ATCTTTGACTCCGTTGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2145 FBgn0030251 FBtr0073387 1 1 1 81 X 10821662 10821750 CACTTTCATTTGTCAGATGCCT 59 10821792 10821810 TCTTGGTTGTCGTCTCCAC 59 NA Drosophila melanogaster 61 CG15311 FBgn0030182 FBtr0071436 1 1 1 144 X 10080640 10080659 GCCCACATTCAATATGCTCC 59 10080760 10082184 GAGATTCAAGTATGATATCAGCTGC 59 NA Drosophila melanogaster 61 CG9686 FBgn0030158 FBtr0071389 3 1 1 63 X 9774292 9774310 GATCGCTTCGATGACTTCC 58 9774337 9774355 GATCCTTGCTCATCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42262 FBgn0259147 FBtr0299576 3 1 1 105 X 9762434 9765395 CTTATAATGCAGTCCAGCGTC 59 9762349 9762367 TTGTAGAAGATCAGGCGGC 59 NA Drosophila melanogaster 61 Ir8a FBgn0052704 FBtr0071333 3 1 1 80 X 9128776 9128864 GATTTACGATGCAACGTGC 58 9128714 9128732 ACGGATAACCTGGACTCAC 58 NA Drosophila melanogaster 61 Gr8a FBgn0030108 FBtr0071311 3 1 1 121 X 9122066 9122085 TTCAACTTCTCCATTCTCGC 58 9122166 9122248 GGAACGATTAGGTAGTAATCGT 57 NA Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 1 1 1 247 X 8360519 8377619 GGGTCACTTAAGGATGCGA 59 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sni FBgn0030026 FBtr0071183 3 1 1 60 X 8136242 8136265 CACTCGAACATACACATACTTGAG 59 8136144 8136163 CTAGCTTGTCATAGGCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089977 3 1 7 162 X 8130533 8130554 GTATCATCCAGATCGAGAAGTC 58 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 CG2263 FBgn0030007 FBtr0071190 2 1 1 60 X 8038883 8038903 ATAACTTTGATGCGTTGGGTG 59 8038843 8038861 ACTTTGAGCAAGGGATGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Upf2 FBgn0029992 FBtr0071117 2 1 1 76 X 7966201 7966220 ATAATGCTCAGGATCCGTCG 59 7966080 7966162 AGAATCCTCATCAGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1444 FBgn0029975 FBtr0071091 3 1 1 117 X 7805124 7805142 TCTACCCGGCATGATTAGC 59 7805222 7805299 TTTGTTCACAAAGGCCTTGG 59 NA Drosophila melanogaster 61 p115 FBgn0040087 FBtr0071089 2 1 1 60 X 7788461 7788479 AGGAGGCTGATAATCCCAC 58 7788502 7788521 ATGAACATCTCCGTGAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32726 FBgn0052726 FBtr0071059 1 1 1 75 X 7319637 7319721 CTGTCTGCTGCAATTCTCC 58 7319580 7319598 GAAGTTGCGATGATGACCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 2 2 2 68 X 6716155 6716236 TGCCAAGAAACAAAGTCCG 59 6716268 6716286 AAGACGAAGGAGGAACAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32750 FBgn0052750 FBtr0070881 1 1 1 134 X 6089850 6089869 CTTCGGTCATTTCATCTGCT 58 6089677 6089753 AATTGAGAGGCTGTGAGGA 58 NA Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 2 2 2 117 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962705 5963099 CTTTGGGCTTCTGAATAAAGGT 59 NA Drosophila melanogaster 61 CG32756 FBgn0052756 FBtr0070860 3 1 1 88 X 5840123 5840141 AACTGAAGTATGCCATGGC 58 5840193 5840277 TTGGCTATACAACTGTGCG 58 NA Nonspecific Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070810 2 1 2 119 X 5650869 5651900 CACAAAGAAGCTAAACTCGCT 59 5651981 5651999 TTGCGAGTTATCGGGACAG 59 NA Drosophila melanogaster 61 snf FBgn0003449 FBtr0070748 1 1 1 131 X 5203724 5204168 GTACCGATGAGAAGAAGGAC 57 5204262 5204280 TCATCTCGTTGGTCTCCTC 58 NA Drosophila melanogaster 61 CG10801 FBgn0029660 FBtr0070526 1 1 1 80 X 3355968 3356088 CCAATTACCGGAGATTTGCTC 59 3356130 3356148 TATTCCGGCTGTCCAATGG 59 NA Drosophila melanogaster 61 CG10793 FBgn0029656 FBtr0070536 2 1 1 60 X 3209720 3209741 GGTCAAGACATCGATATTGCAG 59 3209681 3209699 ATTTCCGCAAACATCCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fs(1)Ya FBgn0000927 FBtr0070485 1 1 1 69 X 2618392 2618410 GTCCTAATCATGCGACAGC 58 2618500 2618518 ATTTGCCGCAACAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2701 FBgn0024973 FBtr0070498 1 1 1 85 X 2612902 2612920 CTTCGTTGTGGACTACCAG 57 2612773 2612855 CGTAGTTCTTGATATTTGGGC 57 NA Drosophila melanogaster 61 CG2680 FBgn0024995 FBtr0273279 2 1 1 145 X 2600880 2600994 GAATCGCTGCAAGTCAAGG 59 2600753 2600771 TCCTGAAGGTGCCTAATGG 59 NA DesignRelaxed Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0070441 2 1 2 124 X 2499675 2499755 AAAGTGCTCAGGACTTTGTC 58 2499842 2499860 ATTGATGTAGGTGTGCAGC 58 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 2 2 2 166 X 2014224 2014242 TGCAGATCCCTTGGTTCTG 59 2014015 2014097 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32810 FBgn0025394 FBtr0070260 1 1 1 81 X 1408812 1408897 AGGAACTAACCCAGATGATCTC 59 1408939 1408957 CCGTAGTTCGTGTACTGCA 59 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 2 3 3 95 X 1376772 1376790 CGTCAACATCCTCAACCTG 58 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 2 3 3 89 X 1365558 1365576 ATCCGACTGCCTCTTAAGG 58 1365628 1365701 CATGAACAGAGACGAGATGG 58 NA Drosophila melanogaster 61 CR41609 FBgn0085819 FBtr0114277 2 1 1 127 U 4571102 4571120 AAGCGTTGGAATGTTCACC 59 4571211 4571229 GTTCCTCTCGTACTACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40583 FBgn0085498 FBtr0302524 3 1 1 60 U 4408738 4408757 ACAAGGTTTACAGCGTTGAC 59 4408697 4408715 GTATGTTCGTGTAGGTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40583 FBgn0085498 FBtr0302524 1 1 1 60 U 4408565 4408586 TGATTTCCATAAAGTGTTGCCC 59 4408526 4408544 GCGTGAGTGTTACCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32011 FBgn0052011 FBtr0089182 1 1 1 111 4 30381 30559 TTCGTTAAGAAGGGTGACAG 57 30289 30308 GGCTGGTAATATTGCATTGG 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 2 7 7 84 4 1078306 1078327 GGACAAGAAGAAACGATCAGAG 59 1078183 1078261 GTAAGAGCCCACAGTCCTC 59 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 3 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 tRNA:CR31480 FBgn0051480 FBtr0083975 1 1 1 60 3R 16716425 16716444 TTTAGCTCAGTGGTAGAGCG 59 16716467 16716485 CTGTGAGGGTTGAACTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084057 2 1 3 136 3R 17122802 17123535 ATTGAAATAGGAAGCCAGTTGG 59 17123632 17123650 GAATAACGCTGCAATCGGG 59 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 2 3 3 80 3R 27661189 27661274 CACTGAGAAATACGGAAAGCA 58 27661315 27661334 TAAGACCCATGTTCCGATCG 59 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 2 2 2 80 3R 26925151 26925170 CTTTCGTTCCATTCAGGGTC 59 26925031 26925109 GCAAACAGCTTACCAGTGTC 59 NA Drosophila melanogaster 61 CG15536 FBgn0039766 FBtr0085628 2 1 1 60 3R 26250352 26250371 ACTCTCAAGAAGCGATCTCC 59 26250311 26250330 CAGATAGCGTAGCATCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085589 1 1 2 104 3R 25881511 25881592 AAGTTAATAGGCGGCAGCA 59 25881425 25881444 CATCAGTTGCTTCTTGGTGG 59 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 2 3 3 80 3R 25864677 25864801 GTCTACGGATACTCGCAGG 59 25864615 25864633 GTAGTCCGGGTATTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 1 2 3 257 3R 25574470 25574563 CAGCCAACTTAACGCAAGG 59 25574231 25574249 TTCTCGAAGAACTGCTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7601 FBgn0027583 FBtr0085544 1 1 1 80 3R 25561672 25561747 CTGACCAAAGCTCTACTTCC 58 25561611 25561630 AAACTTTCCCTGAACAGAGC 58 NA Drosophila melanogaster 61 Spase12 FBgn0040623 FBtr0085435 1 1 1 114 3R 25316619 25316637 CATCATCACGTTCTTCGGA 57 25316467 25316541 AATGGTGATCAGCGAGGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Rpn2 FBgn0028692 FBtr0085385 2 1 1 96 3R 24981684 24981702 TTCTTCCGTCAGCTGTACG 59 24981759 24982038 CAGCATCAATAATACCCTGAGC 59 NA Drosophila melanogaster 61 CG4815 FBgn0039568 FBtr0085260 2 1 1 60 3R 23815864 23815883 TTGAGGAGCAAGTACATCGG 59 23815823 23815842 TATCCCTTGGATGCAGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4884 FBgn0039565 FBtr0085264 1 1 1 143 3R 23783460 23783540 CATGGCGAGAAACAAAGTG 57 23783283 23783301 TGGGAAGGATTCGATTGAC 57 NA Drosophila melanogaster 61 CG18437 FBgn0039536 FBtr0273246 2 1 1 80 3R 23496652 23496727 CCAGAAAGGTTTATGGCGAG 59 23496770 23496788 TGGAGGTGATGATAGTGGG 58 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 3 1 1 94 3R 23314955 23314978 GCTCTAAGAAGTCTAAACCTTCAG 59 23315029 23315105 AACTTTCCCAGCATTTCTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6142 FBgn0039415 FBtr0084987 1 1 1 80 3R 21961844 21961864 GGGACCATATACAATTCCAGG 58 21961903 21961983 GGATAGTCCTTTGCAAATTTGG 58 NA Drosophila melanogaster 61 CG42498 FBgn0260224 FBtr0300624 1 1 1 60 3R 21883795 21883879 GAATCCATAATAAGAGTGCCGT 58 21883756 21883774 GGACTTTGTAGGCGATCTC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 vps2 FBgn0039402 FBtr0084967 1 1 1 98 3R 21878863 21878881 GTTCATGCTGATGAAGGCA 58 21878943 21879021 TTCGTGACACCTTTCATGG 58 NA Drosophila melanogaster 61 HLHm7 FBgn0002633 FBtr0084960 1 1 1 60 3R 21863085 21863105 GCTGAAAGAGTCTAAGAAGCA 58 21863127 21863145 GTATCCAGCACGGAAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boss FBgn0000206 FBtr0084949 2 1 1 96 3R 21792194 21792274 CGGAACAGAGTGTTTACGAG 58 21792333 21792351 GGTAACGTGGGAATCTCAC 58 NA Drosophila melanogaster 61 to FBgn0039298 FBtr0084810 1 1 1 80 3R 21066528 21066601 GACAATGGTTAACGTCAGGG 59 21066643 21066662 GTAACGTCCAGGTAGGTCTC 59 NA Drosophila melanogaster 61 CG13646 FBgn0039255 FBtr0084751 1 1 1 120 3R 20774539 20774559 CCTTCTATGTGATGCTCATCC 58 20774641 20774795 TTGAAGGAGAGGGATTCCG 58 NA Drosophila melanogaster 61 Rpb10 FBgn0039218 FBtr0084688 3 1 1 89 3R 20543422 20543523 AATACACCGAAGGAGATGC 57 20543575 20543594 TTTCGATAAGATCCACGTGG 57 NA Drosophila melanogaster 61 CG13611 FBgn0039177 FBtr0084600 1 1 1 82 3R 20105659 20105679 GCCAAATTTGAACTAGGACGA 59 20105720 20105800 TCACGAAGATTGAATCGTTTCG 59 NA Drosophila melanogaster 61 CG10183 FBgn0039093 FBtr0273191 1 1 1 93 3R 19422601 19422619 TTCCGTCTTCATTTGGCAC 58 19422469 19422545 GTTGAGCATCACAGTGTAGG 58 NA Drosophila melanogaster 61 sav FBgn0053193 FBtr0084356 3 1 1 117 3R 18885700 18886106 ATCAGCCAACTAGCTCTCC 58 18885601 18885619 TACGAATCGCTGGAGTAGC 59 NA Nonspecific Drosophila melanogaster 61 Nha2 FBgn0051052 FBtr0084367 2 1 1 93 3R 18812460 18812536 CTGTTCCTCAGGGAAATGG 57 18812385 18812403 GTATCATGAACCACAGCCG 58 NA Drosophila melanogaster 61 Nup133 FBgn0039004 FBtr0084302 1 1 1 80 3R 18520000 18520084 AGATTATCAGCCTTTACATCGC 58 18520125 18520143 AGCTCAGAAGTTCCAAAGC 58 NA Drosophila melanogaster 61 Dph5 FBgn0024558 FBtr0084280 1 1 1 80 3R 18408760 18408779 ATAGTGAAGCAATGCAGTCG 58 18408629 18408720 GAACTCTTGCATATCCTCAAGG 59 NA Drosophila melanogaster 61 CG13856 FBgn0038959 FBtr0084224 1 1 1 144 3R 18228597 18228615 CTTTCGCTTGAAGGACACC 59 18230185 18230203 ATGATTAGCGATGCCAGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 1 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 3 2 2 135 3R 17844429 17844510 CGGGCTACGGATAACTACG 59 17843785 17843803 AGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 Gr93b FBgn0045470 FBtr0290236 1 1 1 77 3R 17668463 17668481 ATAGCCAGAGTTACCACCA 57 17668347 17668365 CCAAAGGAAACACTCGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6475 FBgn0038886 FBtr0113260 1 1 1 92 3R 17224250 17224390 TTTAGTTTGGGATCTCAAGTGC 59 17224179 17224197 GACCCTTTGCTTCAAGCTG 59 NA Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 2 1 1 271 3R 17206666 17207113 AAGGATAACAGCCAGGTGAC 59 17207346 17207365 GATTTGTAGCGCCGATTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 1 3 3 93 3R 17109863 17109881 TGATGTGCAAGTTTGTGCC 59 17106317 17109806 ATGGCAATGAACCTGTCCA 59 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 2 2 2 83 3R 17096238 17096314 CGATCGTCTCACAAGATAACC 58 17096359 17096377 ACGTTCCTGTTCGATTTCG 58 NA Drosophila melanogaster 61 sec15 FBgn0038856 FBtr0084034 2 1 1 102 3R 16933466 16933548 TCCTTGAAGGCAACAACAC 58 16933382 16933400 CCCTGGTAGTACAGATTGC 57 NA DesignRelaxed Drosophila melanogaster 61 dmrt93B FBgn0038851 FBtr0084007 1 1 1 80 3R 16901988 16902006 GTTGACCACTATGCCACAG 58 16902047 16902333 GATTTGCTCTGGTACTGATCTG 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 1 4 4 80 3R 16882558 16883305 GCTATGAGTACATTGTATCAGCC 59 16882500 16882519 AATTGCAGTTAGAGCACCAG 58 NA Drosophila melanogaster 61 CG31200 FBgn0051200 FBtr0083929 3 1 1 80 3R 16570680 16570820 TGGAGGATCAGGGAAATCG 58 16570618 16570636 TCGCAGTACTGAGGATGTG 59 NA Drosophila melanogaster 61 CG10887 FBgn0038773 FBtr0083864 2 1 1 95 3R 15940787 15940861 ATTCAATAGGAGGAGCCCG 59 15940920 15940938 GAATGTGAACGGCTTTGGT 59 NA Drosophila melanogaster 61 CG4973 FBgn0038772 FBtr0083835 2 1 1 173 3R 15884458 15884543 GGTAACAAAGTGCAAGCAC 57 15884678 15884698 TCCTCCTCATCACTATCTGAG 57 NA Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 3 2 2 155 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865316 15865335 GCGTTGATATAGTACTCCCG 57 NA Drosophila melanogaster 61 RhoGAP92B FBgn0038747 FBtr0083821 3 1 1 99 3R 15737494 15737512 TACTTGACCCTGCAGAAGC 59 15737574 15738045 TCTCCATGACTTCACTGTCG 59 NA Drosophila melanogaster 61 Surf6 FBgn0038746 FBtr0083854 2 1 1 144 3R 15730462 15730480 CGGGAGGAGTATGAAATCG 57 15730282 15730356 TCTCCTCATCTTCTTGTTTGG 57 NA Drosophila melanogaster 61 CG11453 FBgn0038734 FBtr0083791 3 1 1 83 3R 15609858 15609876 TCAAGGATCATCGACTGGG 58 15609920 15610001 GAGTTTCGGGTACATAGTACAG 58 NA Drosophila melanogaster 61 Vha13 FBgn0026753 FBtr0083804 3 1 1 97 3R 15469996 15470015 GAAATTATGGCCAGCCAGAC 59 15469551 15469936 CTTGCCTTGCGTTTACGAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17751 FBgn0038717 FBtr0273217 3 1 1 241 3R 15433426 15433515 GTATCACCACAGAGCTGGA 58 15433714 15433738 CATAAACAGACCGGATATAAATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3734 FBgn0038700 FBtr0083755 2 1 1 80 3R 15214928 15214946 CAAGTGCTACGACCTTAGC 58 15214990 15215074 CACTGACGCATAATGTTGC 57 NA Drosophila melanogaster 61 CG14280 FBgn0038695 FBtr0083738 1 1 1 80 3R 15085283 15085362 AACAAAGATGAAGCTGAGAACG 59 15085403 15085421 TATGAAGTCGTCCGGACAG 58 NA Drosophila melanogaster 61 CG42613 FBgn0261262 FBtr0302093 3 1 1 81 3R 14795944 14795963 TTGGTGAATCGAATCAGAGG 57 14796007 14796367 TAGTCAAATGGGCAGTGTG 57 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611,FBtr0083613 2 2 3 229 3R 14024463 14024484 TTCAAAGTATTAGGGCGTTCAC 59 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atg8b FBgn0038539 FBtr0083533 1 1 1 60 3R 13550371 13550391 TCGTAAACAATGTGATCCCAC 58 13550331 13550349 AAGTGCTCCTGGTACAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31360 FBgn0051360 FBtr0083480 3 1 1 155 3R 13511023 13511041 AAGACAAGCGAAACCTCTG 58 13511221 13511240 AAGAACTGATGATCAGTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG33333 FBgn0053333 FBtr0083441 1 1 1 60 3R 13243324 13243343 TCATTTCGCAAGGACAACAG 59 13243366 13243384 TGGTCTTGACCGTAAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14333 FBgn0038500 FBtr0083434 2 1 1 109 3R 13210394 13210412 TCATTTCAGCAGCCATCTG 58 13210485 13210503 TGTTGATCAGCTCGGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17477 FBgn0038479 FBtr0083418 1 1 1 60 3R 12952322 12952343 AACTATGACAGTCCCAAGTACC 59 12952283 12952302 TAATGCTCTCGTTCAGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3678 FBgn0038461 FBtr0083376 1 1 1 80 3R 12816556 12816637 ATACGATACACAATGGGTGG 57 12816495 12816513 ATGCGGATTAAGCTTCAGG 58 NA Nonspecific Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083348 3 1 6 105 3R 12484785 12558455 CTATCGCAGGTACAAATGGT 57 12484699 12484718 CGGGTCAGATAATGATTCGT 57 NA Drosophila melanogaster 61 npf FBgn0027109 FBtr0083328 1 1 1 80 3R 12436707 12436727 GGATATCCTGAGGAATCACGA 58 12436769 12436840 AAACCGCGAGCAAATTCTC 59 NA Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083186 2 1 2 70 3R 11686321 11686507 TGAGGTGGTCAAGAAGGAG 58 11686541 11686559 TGTTGTGTTTCTCGCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31183 FBgn0051183 FBtr0083187 1 1 1 80 3R 11692285 11694909 CCATGCAGTCGAGAATTGTC 59 11692224 11692243 TATTCAACTCCTCGGCTGTC 59 NA Drosophila melanogaster 61 CG34274 FBgn0085303 FBtr0112469 1 1 1 85 3R 11558092 11558163 TGCTTTATCAAGTTACGCGA 58 11558211 11558229 GCACGCAGATAATGTTCGT 59 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 2 1 1 131 3R 11310037 11310123 TTGTGTACGGATTGAGCCA 59 11310218 11310236 CCTGCGATTCGCTAATCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 1 3 3 84 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239345 11239363 GGTATTGGCGTTCGAATCG 59 NA Drosophila melanogaster 61 Sra-1 FBgn0038320 FBtr0083085 3 1 1 82 3R 11161922 11161941 TAACACTGCACGTCTTTGTG 59 11161985 11162065 TCGAATGAAACGATTCGTGG 59 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 1 2 2 145 3R 11143153 11143227 TCGAGTGGATTACCTGGAG 58 11143336 11143354 GGCTGTTGATGTAGTAGCA 57 NA Drosophila melanogaster 61 CG6912 FBgn0038290 FBtr0083038 1 1 1 121 3R 10962463 10962482 GATATCAGGATGTCAACGGC 58 10962104 10962201 AAGAAAGTATCCAGGCCCG 59 NA Drosophila melanogaster 61 CG7026 FBgn0038276 FBtr0290022 2 1 1 60 3R 10725889 10725909 GTGATGGTCAATATGGGTGAG 58 10725849 10725867 AGGGATTCGAGGTGTACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 3 2 2 80 3R 10717531 10717550 TCAACACATGCTACAAGGAC 58 10717593 10717685 TGAAGAGCATATCCTCGCA 58 NA Drosophila melanogaster 61 CG33332 FBgn0067629 FBtr0082999 3 1 1 119 3R 10714384 10714402 AAAGAAGCACAAGCGAGAG 58 10714545 10714563 AAAGGTCTTCGTTCTGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG33331 FBgn0067628 FBtr0082998 1 1 1 60 3R 10712826 10712844 AAGTTCACTGCCTACGGAC 59 10712867 10712886 GGAAATCGCCCTTGTAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 1 2 2 83 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707624 10707643 CGATCGATGATTTCCGTGAG 59 NA Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 2 3 3 91 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551642 10551772 CAGATGTTGATCGTCTCATTGG 59 NA Drosophila melanogaster 61 mRpL11 FBgn0038234 FBtr0082953 1 1 1 80 3R 10338114 10338193 CTTACCATGCAGCAAATGTG 58 10338235 10338254 CGGATCTATTTCCCTGACCA 59 NA Nonspecific Drosophila melanogaster 61 Crz FBgn0013767 FBtr0082927 1 1 1 66 3R 10140836 10140854 ATTTGCAGGATTGGAGCAG 58 10141093 10141111 ATCAGTGAACGTTGGAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 3 5 5 80 3R 10090933 10090954 ATAACCTTGTAGTTGATGCCAC 58 10090814 10090892 TCGAATAGCAATTCGGCTC 58 NA Drosophila melanogaster 61 CG9616 FBgn0038214 FBtr0300059 3 1 1 129 3R 10071060 10071081 CATGAAAGACAAACAACAGACC 58 10070897 10070970 TGAACCCACAAACAAGTCG 58 NA Nonspecific Drosophila melanogaster 61 tal-2A FBgn0259731 FBtr0299998 1 1 1 60 3R 9639367 9639385 GCCTATCTGGATCCCACTG 59 9639408 9639427 ATATTGCTGCTTCTGCTTGC 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12538 FBgn0038157 FBtr0082791 2 1 1 62 3R 9349191 9349209 TTGAACAAGTGTCAGCGTC 58 9349147 9349165 TATTGGAGCACCATGGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 timeout FBgn0038118 FBtr0082712 2 1 1 81 3R 8921134 8924596 GTTAGTCAGCGAATCGTTGAG 59 8924637 8924657 GCTCACAATCATGTCCATGTC 59 NA Drosophila melanogaster 61 CG10041 FBgn0038014 FBtr0082613 1 1 1 63 3R 8177161 8177179 CTTGACATCTGTGCGATGC 59 8176803 8177134 GAGCTCCAGAATCTCCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31358 FBgn0051358 FBtr0082554 2 1 1 60 3R 7857175 7857195 TAGCCTACGAATTCCATCGAC 59 7857079 7857156 CCTAAGCAACTCCTAATACGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 CG3281 FBgn0260741 FBtr0082511 3 1 1 96 3R 7788346 7788365 ACCAATCTGTATGTCCACGA 58 7788216 7788289 TCCATGTCCACTTCAATTTGG 58 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 1 4 4 60 3R 7646930 7647007 AAATTGCGCAAGACAGAGG 59 7646888 7646906 ACTCAGCGTCATCTAGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 1 1 1 154 3R 7500144 7500225 CTACAGAGGAGCACTGCAG 59 7500343 7500361 GAATCGTCAGCTTTCGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300581 2 1 2 80 3R 7451340 7451430 CGGAATCACTACTGCTACG 57 7451278 7451298 ATGAATATTGCTGGACAGGTG 58 NA Drosophila melanogaster 61 CG5270 FBgn0037897 FBtr0082387 2 1 1 80 3R 7254577 7254658 CTGAAGCAGATTCGACTAGAG 58 7254698 7254718 GCAAATTTGTATCCGATCTGC 58 NA Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314,FBtr0082313 1 2 2 83 3R 6579296 6579314 GCAATATGTTACTGCCGGT 58 6579167 6579251 GAAAGGCAATTGACATCAGTG 58 NA Drosophila melanogaster 61 Cyp12e1 FBgn0037817 FBtr0301283 1 1 1 102 3R 6261646 6261664 TTTGGAAACTAGCCTGCTG 58 6261730 6261806 TACAAGAGTAGGATCCGCT 57 NA Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 2 2 2 122 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175608 6175626 CGGCTTGATGTTCGATGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG6293 FBgn0037807 FBtr0082240 3 1 1 121 3R 6135707 6135730 CTTAAGTACGTAACTCCATTGACC 59 6135409 6135627 ATTCCAGTGGTTCCCACAG 59 NA Drosophila melanogaster 61 Fst FBgn0037724 FBtr0082101 1 1 1 60 3R 5471121 5471140 AAGAATCCACCACAGAGGAG 59 5471080 5471098 CTTGTGGATTCTACAGGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42511 FBgn0260237 FBtr0300646 2 1 1 60 3R 5232774 5232854 TATTCCCAACCGCATTATGGA 59 5232876 5232894 AATAACATCCATGTGGCCC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 2 3 3 81 3R 5161908 5161926 GTTCTCGCTTATCATGGCG 59 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 3 2 2 98 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088724 5088805 TTGATGGCAATCCTCAAACTC 59 NA Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 3 2 2 80 3R 4865807 4865903 AAATATGGATCCGGTAAGAAGG 57 4865943 4865962 CATCACATTCTTGAGCAGGT 58 NA Drosophila melanogaster 61 Prosbeta3 FBgn0026380 FBtr0082010 2 1 1 60 3R 4831542 4831560 AAACCGTGAAATGTGTCCC 58 4831500 4831518 GTGCTCGTACAGAAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11975 FBgn0037648 FBtr0081960 3 1 1 112 3R 4819332 4819426 TACTTTCCAGAGGGTGGTC 58 4819502 4819520 CACACGATCACCTTGTTGG 59 NA Drosophila melanogaster 61 CG11967 FBgn0037646 FBtr0081958 3 1 1 85 3R 4807882 4807972 CTTCTAAGCTTAACCGACGC 59 4808020 4808038 CCATTCCTGGAACCTCTCC 59 NA Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 1 2 2 80 3R 4761332 4761351 TATAGATAGTGAGGTGCGCG 59 4761391 4761660 CGATATTCACTCTTGATGCTCG 59 NA Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0081943 2 1 2 141 3R 4593508 4593852 CGTTCCAAGTGAATGAATGG 57 4593386 4593404 TTTCGCTTACGATTAGGGC 58 NA InUTR Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 3 3 3 139 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 CG8032 FBgn0037606 FBtr0081880 3 1 1 84 3R 4490401 4490419 TCCTTATTCTGGAGGCACG 59 4490466 4491172 GCGCCAAGTTCTATCTTCTG 59 NA Drosophila melanogaster 61 pch2 FBgn0051453 FBtr0081898 1 1 1 121 3R 4387267 4387342 GTAACGATCTTCGCTCTAATGC 59 4387167 4387185 TTGCTCAGCTGTGAGATCC 59 NA Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807,FBtr0100368 2 2 2 82 3R 4063877 4063896 GCATACCTCCAATGGAAGTC 58 4063747 4063835 TTGACATTTCGACCTTTCTGAG 59 NA Drosophila melanogaster 61 CheA84a FBgn0261290 FBtr0091780 1 1 1 131 3R 4030429 4030501 AAACTTGCGCATTGATTCC 57 4030316 4030334 ATTCGAAAGTGCCATTTGC 57 NA Drosophila melanogaster 61 CG10903 FBgn0037543 FBtr0081787 2 1 1 140 3R 3856794 3856874 ATATTCCACAAACACCCGC 58 3856978 3856996 AGAACGCTACCTGAGAGTC 58 NA Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0290324,FBtr0081784 3 2 2 81 3R 3828159 3828285 CGTATACGTGCTCATTTCCT 57 3828328 3828347 GAAGTGGGCACTATTCTCTG 58 NA Drosophila melanogaster 61 Prat FBgn0004901 FBtr0081764 3 1 1 60 3R 3736040 3736060 GAGATTGGTCCTGATAGACGA 58 3736000 3736021 CTTGATTATTGGTCCAATGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18745 FBgn0042102 FBtr0081777 3 1 1 103 3R 3610835 3610910 GATCCAATCTGAGCAGCCA 59 3610750 3610768 GTGTGATCCCTCGAAGGAC 59 NA Drosophila melanogaster 61 CG10029 FBgn0037498 FBtr0081591 3 1 1 98 3R 3142213 3142336 GATTGTAGGTTCCTTGTGGG 58 3142134 3142152 ATTCGGAATCGATGGATCG 57 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 3 8 9 80 3R 2926906 2926926 TATGAGAAACAGACGACACGA 59 2925232 2926864 CAGATCAAGCGTTCTGCTG 59 NA Drosophila melanogaster 61 agt FBgn0024912 FBtr0081697 3 1 1 60 3R 2485499 2485518 AATCCGAACTCTGGAAGGAC 59 2485458 2485477 CTTTCGAACAGTTTATCCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31560 FBgn0051560 FBtr0078609 3 1 1 60 3R 2136226 2136245 TATCCGATGCCCTTAATGCT 59 2136268 2136286 TATCCTTGGACGGTCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi13 FBgn0037422 FBtr0078605 3 1 1 130 3R 2117867 2117886 AATATGCTGGAGACCTGGTC 59 2118214 2118232 TTCAGGATCAAGGGTAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG15589 FBgn0037409 FBtr0078591 3 1 1 104 3R 2031534 2031617 CAATGCAGAGGCATCACAG 59 2031685 2031703 TCCTGCATCATCTGCTGAC 59 NA Drosophila melanogaster 61 Sym FBgn0037371 FBtr0078723 2 1 1 81 3R 1567432 1567514 CGTAGAGCAAGTTTGTAAAGTG 58 1567372 1567390 CGAGTTATCCCTAAGCAGC 57 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 1 2 2 80 3R 1487731 1488795 GGGAATAAGTTTCAGTCCCA 57 1488838 1488856 CGCATGAAGTCCCATATCC 58 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 2 2 2 80 3R 1434216 1434238 GAGCATCTGAACGATAATTCCAG 59 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 Snm1 FBgn0037338 FBtr0078688 1 1 1 80 3R 1382369 1382388 GTGCTAACAGAAGATCGCAG 59 1382431 1382506 GTAATCGACTAGGCTCGGA 58 NA Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 3 2 2 84 3R 1233859 1233877 GATACCTAGGATACGCGCT 58 1233432 1233812 TCCATGACGGATGAACTCTC 59 NA Drosophila melanogaster 61 CG14661 FBgn0037288 FBtr0078848 1 1 1 82 3R 779988 780066 GCAATATGCCTGACTATATCCA 58 779927 779945 CAAGTTGTGAACACTGCTC 57 NA Drosophila melanogaster 61 CG14657 FBgn0037282 FBtr0078875 1 1 1 64 3R 645546 645564 ATGATGAGGACAACGACGA 58 645444 645518 TGGCAATGTCAAGTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 1 4 4 80 3R 534706 534724 ATCGAGGATAAGATCCGGG 58 534768 534896 TTTCAGTTCCTCTTGCGAG 57 NA Drosophila melanogaster 61 CG31528 FBgn0051528 FBtr0078923 3 1 1 60 3R 243029 243047 TCTGTTAAGCAGAGCGACC 59 243071 243089 TCATCACCTTCGATGAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31516 FBgn0051516 FBtr0078987 3 1 1 60 3R 44882 44903 CAACATGCAGATATGTCTGTCG 59 44843 44861 GTACTCGAAGAACTGGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snmRNA:641 FBgn0065088 FBtr0091663 1 1 1 60 3L 17661785 17661804 GCAATATAGAATCGGCCGAC 59 17661744 17661764 GGTGTCCAATTGGGATTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 3 4 4 88 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709222 22709241 ATTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 1 2 2 144 3L 22056138 22056786 AAAGGTTGCATACAGGTCTG 58 22056891 22056911 CCTCAATGAACTGGTTAACCC 59 NA Drosophila melanogaster 61 CG33292 FBgn0053292 FBtr0078428 1 1 1 69 3L 21651882 21651900 GAAACTCAAGACCAGCGTG 59 21651931 21651951 CATCTGTTGCACCTTCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7173 FBgn0037099 FBtr0078380 1 1 1 80 3L 21549433 21549453 AAGCCCATTAAGGAATACACC 58 21549024 21549393 CACCTTTGGAATATCTTGCTG 57 NA Drosophila melanogaster 61 SAK FBgn0026371 FBtr0078387 3 1 1 80 3L 21506448 21506550 GGAATAGCTACTGAGCTCTCC 59 21506388 21506408 CATGCTCGGAATAACAGAGAC 59 NA Drosophila melanogaster 61 CG5664 FBgn0037082 FBtr0078397 2 1 1 100 3L 21433681 21433702 GATACATTCCTGGACATTCTGG 58 21433544 21433620 GCAATTAGGATCATGGCCA 58 NA Drosophila melanogaster 61 CG7338 FBgn0037073 FBtr0078342 1 1 1 105 3L 21330467 21330541 AAGCATAAGTTCGAACGCT 57 21330610 21330628 GATTCACCTTGAAGGCCAG 58 NA Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 2 2 2 134 3L 21297182 21297399 CAAAGACAACGTCGTTACTG 57 21297067 21297085 ATCACTGCCGGTAATAGTG 57 NA InUTR Drosophila melanogaster 61 CG10565 FBgn0037051 FBtr0078323 3 1 1 91 3L 21127997 21128473 GAGATACTGGGCACATCCA 58 21127924 21127944 TTATCGATGTCGTTCTGTGAG 58 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288,FBtr0301579 1 2 2 173 3L 21026066 21026084 AATCCGAGGTGGTCTTTCC 59 21026285 21026303 AAACGTCAAGTGTTTCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288 2 1 2 95 3L 21024936 21024954 ATATTTAGGCGTGCACCGT 59 21025013 21025090 ATACGGGAATCTCCTCCAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0300055 1 1 2 170 3L 20955007 20955025 TATTGCACGGCAATATGGG 58 20954793 20954811 TCTTGTACACCAAGGGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11458 FBgn0040637 FBtr0078265 3 1 1 97 3L 20898956 20898974 TCTACTTGCCGTTCTCCTC 58 20899035 20899053 CATTCTTCTGCCAACCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3634 FBgn0037026 FBtr0078272 1 1 1 81 3L 20801866 20801952 CACTTCGTTTATAGAGCAAGTC 57 20801806 20801824 ATTGCTGGACTCTGATTGG 57 NA Drosophila melanogaster 61 CG5199 FBgn0036994 FBtr0078224 3 1 1 126 3L 20444348 20444984 CAGACATAAGCGCTTTGGAG 59 20444241 20444259 TTTAGATGCATCGACGCCT 59 NA Drosophila melanogaster 61 CG6663 FBgn0036969 FBtr0074843 2 1 1 109 3L 20314993 20315011 TTGAGAAACTCGAGGCCTC 59 20315083 20315159 TAGTCCAGCGTCATATACGG 58 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 2 4 4 81 3L 20254920 20254939 GTTTCCCAACAAGTTACGGT 58 20254982 20255058 GAAGACCGTTCTTATGCAGC 59 NA Drosophila melanogaster 61 NPFR76F FBgn0036934 FBtr0074871 1 1 1 105 3L 20067291 20067309 GAGTACGAGTCACTGCCAG 59 20053819 20067225 AATCCTATCTCAGTTGATTCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42654 FBgn0261506 FBtr0302431 1 1 1 98 3L 19947183 19947254 GTCTTATCGCAATATGGTTGG 57 19947105 19947126 CATAAGTGCTGAAGCTAAACTG 57 NA Drosophila melanogaster 61 CG9231 FBgn0036887 FBtr0074972 3 1 1 89 3L 19578911 19578929 CGAGCCAAACAATCTGGAG 58 19578776 19578861 ACATCCTGACTAACGAAATTGG 58 NA Drosophila melanogaster 61 Shal FBgn0005564 FBtr0074973 3 1 2 83 3L 19565173 19565403 GGAGAAGACAACGATGTAGC 58 19565109 19565127 GCTTTCCTAATGAGCTCGT 57 NA InUTR Drosophila melanogaster 61 CG10424 FBgn0036848 FBtr0075033 1 1 1 80 3L 19090320 19090418 ACTTCACGTCGTTGTTATTGG 59 19090260 19090278 CACAGCTTGAGTACGTTGG 58 NA Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035,FBtr0075036 1 2 2 86 3L 19062643 19062663 GTATCTGCAGATTCCGATCAC 58 19062373 19062596 CGCGCTTCCTCTATAAACTG 58 NA Drosophila melanogaster 61 CG6839 FBgn0036831 FBtr0075069 3 1 1 79 3L 18910783 18910801 GAGGATGACGGGATCTTCG 59 18910843 18911216 ATAGTAACACTGCAGGCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG34252 FBgn0085281 FBtr0112446 2 1 1 109 3L 18064752 18064770 AACGATAGTTGCCAATCGC 59 18064307 18064680 TTGCACAGCTGATTAACTCC 58 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 2 3 4 144 3L 17071247 17071266 GTGGTAGACAAAGTTTGCGA 58 17067480 17070734 TGATGTTATCGTATGCAGAACG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 1 3 4 127 3L 17067475 17070729 TGCATACGATAACATCATGTGG 59 17067293 17067311 CAGTTGGATAGGGCAGTCC 59 NA Drosophila melanogaster 61 sinah FBgn0259794 FBtr0301683 1 1 1 60 3L 16853282 16853300 CGTGAGAACTTCTCCTCGT 59 16853324 16853342 CGACGGTGTGCTTATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4101 FBgn0025558 FBtr0075314 2 1 1 61 3L 16605765 16605783 GCTTTATGTGGGTGCTCTC 58 16605806 16605826 TATTCTCCATCAATACTGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4169 FBgn0250814 FBtr0075309 1 1 1 87 3L 16577758 16577776 AACAAACTGGTGGTAGCCA 59 16577883 16577901 AGGACTCGTTTCGTGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075535 2 1 2 87 3L 15832661 15832680 ATAGAGCGGTGCTATGATGG 59 15831837 15832611 TTAAGGAGATGCGGAGCTC 59 NA Drosophila melanogaster 61 CG13449 FBgn0036520 FBtr0075590 3 1 1 91 3L 15604506 15604588 TGGTCGATATCTCAATAGAGCT 58 15604436 15604454 AAACTTTATCGTCGACGGG 58 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 3 2 2 83 3L 15551210 15551361 AAGTGACTGTGACAGATCGT 59 15551405 15551425 TAAGGTCAATGGTCGAGTCAC 59 NA Drosophila melanogaster 61 CG33259 FBgn0036495 FBtr0075615 3 1 1 60 3L 15400963 15400984 AACATTCACTCTTGTGGTACTG 58 15401005 15401023 GACTTTCTCAGCAAAGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 3 2 2 85 3L 14989528 14989605 AGAAGATATGGTACGCTTGGA 58 14989652 14989670 AGGAACCAGAAGAATGCCC 59 NA Drosophila melanogaster 61 Leucokinin FBgn0028418 FBtr0075722 1 1 1 60 3L 14553811 14553829 TGGCAAAGATAGTCCTGTG 57 14553769 14553787 CTGGCTCCATAGACTTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gl FBgn0001108 FBtr0075756 1 1 1 102 3L 13924205 13924223 GATGAAGCGCTCTGAAGTC 58 13924289 13924854 GACTTGTTCCTGCAAGTCG 59 NA Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075865 1 1 2 80 3L 13380812 13380830 GATCTCGCTGTTCATGTGG 58 13380695 13380768 GACTCTGTCGGATAACCCT 58 NA Drosophila melanogaster 61 Syx13 FBgn0036341 FBtr0075886 2 1 1 89 3L 13038616 13038636 AATAGAGTCGGACATCATCGA 58 13038686 13039326 TCGATGAAATCCATCTGCTG 58 NA Drosophila melanogaster 61 Syx13 FBgn0036341 FBtr0075886 1 1 1 89 3L 13038615 13038636 AAATAGAGTCGGACATCATCGA 59 13038685 13039325 CGATGAAATCCATCTGCTGC 59 NA Drosophila melanogaster 61 MICAL-like FBgn0036333 FBtr0075898 1 1 1 60 3L 13008079 13008099 GCCATAATACACCACTTTCGG 59 13008039 13008058 TATCGTCTGCTTTAAGTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10660 FBgn0036288 FBtr0075976 2 1 1 82 3L 12482159 12482180 CAGCATTCAGACGAATACATGG 59 12482047 12482122 GTTTCATAGAGGATTTGATATCCGG 59 NA Drosophila melanogaster 61 CG5645 FBgn0036254 FBtr0076024 2 1 1 89 3L 12127977 12128057 ATAGAAGAGATCTTGCTGGCC 59 12127908 12127926 CTCTACGTGTTCCGGTCTG 59 NA Drosophila melanogaster 61 CG6793 FBgn0036242 FBtr0076051 1 1 1 60 3L 12036112 12036133 GTTATTGCACCTAATTGCAGAG 58 12036215 12036233 CAATTCCTTGGCTTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6947 FBgn0036233 FBtr0076045 2 1 1 81 3L 11972185 11972204 CCAAGTACATTAGCTGTCCG 58 11972248 11972317 CATGTGGTTTCCTCCTCAG 57 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0110780 1 1 3 173 3L 11814811 11814946 CGTTGAAAGCAATTTGTCAGTG 59 11814659 11814680 ACAGTGCAAGCATTTAGTTCTC 59 NA InUTR Drosophila melanogaster 61 Klp68D FBgn0004381 FBtr0076030 2 1 1 80 3L 11789707 11789832 TGAGCATAGTTCAAGATCCCA 59 11789874 11789892 CCCACTTTGATGGTGTTCG 59 NA Drosophila melanogaster 61 CG6071 FBgn0036186 FBtr0076136 3 1 1 81 3L 11638596 11638617 AACATAACATTAGTGCACGACC 59 11638468 11638557 CGATCTCCTTGTATGGTTTCTC 58 NA Drosophila melanogaster 61 CG6175 FBgn0036152 FBtr0076183 2 1 1 93 3L 11286949 11286967 ATATGGATACCACTCGCGA 58 11284196 11286892 GAAGAGGAACGTGTCACAG 58 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 2 3 3 87 3L 11171620 11171755 GCAGAGATATTCTCACGTGG 58 11171552 11171570 AGGTTCGTGTTCTTGTAGC 57 NA Drosophila melanogaster 61 CG6628 FBgn0036072 FBtr0076311 3 1 1 82 3L 10159434 10159510 TTGGGAGATTCCATTCGCA 59 10159370 10159388 TTCTCGAATCTCAAGGCGG 59 NA Drosophila melanogaster 61 Ilp5 FBgn0044048 FBtr0076371 1 1 1 80 3L 9816859 9816877 TTGATGGACATGCTGAGGG 59 9816726 9816815 ATCGAATAGGCCCAAGGTG 59 NA Drosophila melanogaster 61 Or67b FBgn0036019 FBtr0076420 2 1 1 80 3L 9621206 9621224 TATCCTGGTTCCCAAGGAC 58 9621093 9621165 TTATGATGGCTTGATATGCGAG 58 NA Drosophila melanogaster 61 CG3434 FBgn0036000 FBtr0076473 2 1 1 80 3L 9452686 9452765 CTTACTGATGGTTCACAACCT 58 9452626 9452644 GGAAGCGTATCTTTAGCCA 57 NA Drosophila melanogaster 61 CG4477 FBgn0035971 FBtr0076430 3 1 1 99 3L 9243955 9244044 GTATGTATAAAGGCGGTCCG 58 9244106 9244124 ACGGATGGAACTCTTAGCC 59 NA Drosophila melanogaster 61 CG6983 FBgn0035896 FBtr0076659 1 1 1 85 3L 8437642 8442256 GCATCAAGACCACCATGTG 59 8437575 8437595 CAGACCTTTGGTATGTCACAC 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076671 2 1 9 88 3L 8351171 8351189 GTATCGCCTGTGCTTAGGA 59 8351021 8351119 TACCACACTTGAGTGCTCG 59 NA InUTR Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 2 5 5 124 3L 8097909 8097988 TCTTCTCAAGGTGCATCTG 57 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 CG32372 FBgn0052372 FBtr0076793 1 1 1 82 3L 7518782 7518800 ATCGAGTGAACTCGTCACC 59 7518840 7519203 TGGGATTGTCATCTAGATGTATCTC 59 NA Drosophila melanogaster 61 CG18417 FBgn0035780 FBtr0076855 1 1 1 69 3L 7394195 7394216 TCACTTATTCTGTATCCTTGGG 57 7394313 7394331 CAACCTCATGCAGATCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL50 FBgn0028648 FBtr0076891 1 1 1 184 3L 7236896 7236970 AAACCCTAATTCTTGCGGG 58 7236671 7236689 TACGGTTCGAATACGTTCG 57 NA Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 2 2 2 95 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124305 7124326 TTGAAGAGACCGTAGAATTCCA 59 NA InUTR Drosophila melanogaster 61 Mis12 FBgn0035725 FBtr0076936 1 1 1 80 3L 6962013 6962032 GGACTTCAATAGCCTAGCCT 59 6961889 6961970 ACAATATGTTCGCGCTCTG 58 NA Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 2 2 2 119 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750444 6750462 TTGGCAATCGCATCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 2 7 10 106 3L 5534352 5534441 CTATAACGGTATTAACGATGGTCG 59 5534269 5534288 CAACAACGTGGACATATGGG 59 NA Drosophila melanogaster 61 CG15012 FBgn0035528 FBtr0300776,FBtr0073240 3 2 2 87 3L 4291810 4291891 CAGTGAAGGGAGAACATATTTCTG 59 4291746 4291764 ATTAGGAAGCCCACAAGCA 59 NA Drosophila melanogaster 61 Teh4 FBgn0035504 FBtr0301645 3 1 1 80 3L 4175922 4176019 GTGCTACTATAACAAGGACTCG 58 4175863 4175883 ACTAGAAGCTCCCTGTAAACC 59 NA Drosophila melanogaster 61 CG10863 FBgn0027552 FBtr0073171 3 1 1 80 3L 3941674 3941694 TCCAATTTCAACTCGGAACAG 58 3941558 3941635 ATGACATTCGATCTGATTGTGG 59 NA Drosophila melanogaster 61 CG14974 FBgn0040694 FBtr0073140 3 1 1 101 3L 3620873 3620893 AGTTACAGAAGTCCAAAGGAG 57 3620683 3620753 TATGGAGCAATTATCTGCCAG 58 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 2 2 2 92 3L 3375956 3375976 TGCGCGGAAAGATTTATATCG 59 3376028 3376104 GCCAACAAGCGAATCTATCTC 59 NA Drosophila melanogaster 61 CG14969 FBgn0035440 FBtr0073082 1 1 1 80 3L 3333918 3333994 TGCAGGACAATATGAACCG 57 3333856 3333874 AATTGGTCAGCTTCACCTC 57 NA Drosophila melanogaster 61 dro4 FBgn0052282 FBtr0073061 3 1 1 60 3L 3315680 3315698 CCATTGTCCTAATGGTGGC 58 3315721 3315740 CTGAATCTTCCAGATGGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14960 FBgn0035428 FBtr0073051 3 1 1 105 3L 3271265 3274050 ACAGCCCTCATTATGTTTCTC 58 3274117 3274135 TTATCTTGGCTGCAAAGGC 59 NA InUTR Drosophila melanogaster 61 CG14963 FBgn0035409 FBtr0073111 3 1 1 60 3L 3172133 3172153 GTCTATTGAACCAGTTTCCCT 57 3172093 3172112 TTTAGAAATCCTTGCCAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 aly FBgn0004372 FBtr0073006 2 1 1 95 3L 3026048 3026066 TAGATGTTTCGGAGGACGA 57 3025908 3025992 GGAAATTGTACAATCTCTTGCC 58 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072921 1 1 3 264 3L 2488909 2488927 ATGCATTATTACCCGCTGC 58 2491125 2491143 GTATTCCGTGTAGTCCGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dre4 FBgn0002183 FBtr0072864,FBtr0072865 3 2 2 81 3L 1873975 1874052 TGTCAAGGAAGTTACATACCG 57 1873914 1873933 AGCATTGTTTAGATTTGCGG 57 NA Drosophila melanogaster 61 Cdc37 FBgn0011573 FBtr0072777 2 1 1 81 3L 1795984 1796183 GGAGGCCCTGAAGAAAGAG 60 1796225 1796246 CTTCTTAATCATCTCGCTCTCG 59 NA Drosophila melanogaster 61 CG7864 FBgn0035233 FBtr0072743 3 1 1 90 3L 1559023 1559042 CAATAACCTTCAGACCCTCG 58 1559094 1559167 CAGTTGTAACAATCTGCTGG 57 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 1 3 3 80 3L 1539067 1539086 CATCACGCTGATATGTCAGG 59 1539125 1539210 TGTCGAGGAAGACATCTATACAG 59 NA Drosophila melanogaster 61 Ir62a FBgn0053971 FBtr0100014 1 1 1 60 3L 1530336 1530355 GCTTCATGATCCCATTGGAC 59 1530295 1530317 CTAAATGGCAGGAACACATAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9192 FBgn0035193 FBtr0072734 1 1 1 60 3L 1237826 1237844 GAATCATAGGGAGACCGCA 59 1237784 1237802 GAGAATCCACCATAGCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33965 FBgn0053965 FBtr0100006 2 1 1 81 3L 1233637 1233711 AATCAAGGAGAGGGTTTCCG 59 1233752 1233773 GTACTCCTCAGGAAGATAGTGC 59 NA Drosophila melanogaster 61 dpr20 FBgn0035170 FBtr0072594 1 1 1 80 3L 853955 853973 GGCTATCTACGAGTGCCAG 59 853835 853913 ATCACTTTCGGAGCATTAACG 59 NA Drosophila melanogaster 61 CG32483 FBgn0052483 FBtr0072608 1 1 1 101 3L 689247 689265 GATGAAAGCCTCCAAGGGT 59 689111 689182 TACAGACGTTCTTCGGAGG 58 NA Drosophila melanogaster 61 CG34268 FBgn0085297 FBtr0112463 2 1 1 145 3L 501024 501106 AATGTTCCGCATTATCGCTG 59 501214 501232 CTGGAACATGCTTCACCAC 59 NA InUTR Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 1 2 2 80 3L 220438 220520 GTACACGTTCATAGAACACGG 59 220378 220401 CGCCTTACTATAAATGATAGTGCC 59 NA Drosophila melanogaster 61 snoRNA:Me28S-G1083d FBgn0082932 FBtr0113534 1 1 1 60 2R 20073092 20073112 TGATGAGCTTTAACTTTCGCC 59 20073133 20073152 AATCTCGCATTCAACAGGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:229 FBgn0065073 FBtr0091664 2 1 1 105 2R 18961458 18961477 CAGAACATGGCATCATGTGG 59 18961372 18961390 TTCTAAGCAGCCCTTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:229 FBgn0065073 FBtr0091664 1 1 1 104 2R 18961458 18961476 AGAACATGGCATCATGTGG 58 18961372 18961390 TTCTAAGCAGCCCTTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:MeU6-C68 FBgn0086021 FBtr0114297 2 1 1 60 2R 4053462 4053481 TGATGATTCTCCATCCTTGC 57 4053501 4053522 AGAACCAGGTTATCCTCTTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33421 FBgn0053421 FBtr0086413 1 1 1 60 2R 15628639 15628657 ATACATCGGTTCTCGTCCG 59 15628597 15628615 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30454 FBgn0050454 FBtr0086445 1 1 1 60 2R 15615736 15615756 TGTCTAGTGGTTAGGATACCC 58 15615696 15615714 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30251 FBgn0050251 FBtr0087961 1 1 1 60 2R 8222546 8222564 TCGTCTAGTGGTTAGGACC 57 8222504 8222522 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 3 2 6 102 2R 20819470 20819490 CCATGTACATTGAGTCGTGTG 59 20819315 20819409 ATGTACATTAGCTTCAGCTGGA 59 NA Drosophila melanogaster 61 CG16912 FBgn0035064 FBtr0072429 3 1 1 117 2R 20670497 20670517 CAATCTAAAGGCTATCGAGCA 58 20670348 20670421 GGCATTGTTGACGATTATTAGG 58 NA Drosophila melanogaster 61 CG30421 FBgn0050421 FBtr0072369 1 1 1 80 2R 20632352 20638831 TTAATGTCGTGTCGGAGGAG 59 20638874 20638892 AGCATCCGGTGTAGAATGG 59 NA Drosophila melanogaster 61 CG3511 FBgn0035027 FBtr0072309 2 1 1 80 2R 20459786 20459807 ACATCAAATTCTGGAAGAAGGG 58 20459845 20459923 GTGATTTGATGGGTACTAGGTG 58 NA Drosophila melanogaster 61 CG10339 FBgn0034972 FBtr0072288 3 1 1 158 2R 19967250 19967599 TTGTACCTGATGGACTGCC 59 19967110 19967128 AGATGTTCAGCCGATACGA 58 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 1 1 3 68 2R 19858114 19858191 TTGACATACCGGATAGGGC 59 19858220 19858241 CGTGTTTGGTATTACTTGTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pi3K59F FBgn0015277 FBtr0072064 1 1 1 80 2R 19448154 19448247 TGCAAATCAAGGTAGGGAC 57 19448291 19448309 ATCTCAGGATCGGATCCTC 57 NA Drosophila melanogaster 61 CG34372 FBgn0085401 FBtr0273218 1 1 1 80 2R 19354723 19354741 CCTCCGAATGGTTCTTCCT 59 19354781 19361612 GATGAAAGGACTTGAGATACTGC 59 NA Drosophila melanogaster 61 yellow-d2 FBgn0034856 FBtr0072012 1 1 1 98 2R 19268966 19269038 TCTACTACAAGCATGGCGA 58 19269100 19269118 TTTCGTTTGTGACGTAGGC 58 NA Drosophila melanogaster 61 CG34210 FBgn0085239 FBtr0112403 1 1 1 71 2R 19239114 19239132 GCTGCTTTGTCTACTACCA 57 19239229 19239247 GATTGTTGAGCAGGGAGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gr59a FBgn0045483 FBtr0071964 1 1 1 80 2R 18968967 18968985 TCAGCGAGTACCAAATGCA 59 18969023 18969108 CGTAGATCAAGTAAGAACTCAACTC 59 NA Drosophila melanogaster 61 CG30187 FBgn0050187 FBtr0301927 3 1 1 80 2R 18805923 18805999 CAAGACGTCCAATCAGTGAG 58 18805862 18805882 CACTACTGCTGTTATGACGTC 58 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 2 3 3 85 2R 18764361 18764448 GCAGGAATAAGTCAGTGAATCG 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 Obp58d FBgn0034770 FBtr0071872 3 1 1 86 2R 18594569 18594643 GTGTAACACATCGAGGGCT 59 18594691 18594711 GGTGAGTGTATAACGAAGCAC 59 NA Drosophila melanogaster 61 pgc FBgn0016053 FBtr0112519 2 1 2 80 2R 18217681 18217703 GTCAGATCTTAAACGAAGATCCG 59 18217743 18219689 TTGTAGTTCAAAGCCACGC 59 NA InUTR Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 3 3 3 81 2R 18113470 18113489 GCTATACTACACGTTGGGAG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG4021 FBgn0034659 FBtr0071716 2 1 1 80 2R 17662011 17662101 GAGTACAGCATACAACGTCC 58 17662143 17662162 CACAGGTTTCATGTCAGTCG 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 2 5 5 200 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546236 TTATCTCCGTGTTCCTCGTG 59 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 3 2 2 80 2R 17542999 17543106 CTACTCTTGCTCACTGCTC 57 17543150 17543168 TCATCCTGACTCATCGAGG 58 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 2 2 2 87 2R 17424145 17424164 CATATCCGAGAGTCCTTGGA 58 17424022 17424098 CAGGATGAATCGATGATTTACG 57 NA Drosophila melanogaster 61 CG15651 FBgn0034567 FBtr0071553 2 1 1 84 2R 16873023 16873042 CAAGATGAACCTGGATTTGC 57 16872899 16872977 CTTCTGCAGGAACAAATCAC 57 NA Drosophila melanogaster 61 CG13436 FBgn0034532 FBtr0086229 3 1 1 80 2R 16525005 16525083 TCGGAGCTTATATTTCCGCA 59 16525125 16525144 CTCAACAATGTGGTTCAGGT 58 NA Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 2 2 2 128 2R 16506814 16506832 CAAGGGCACTTATCACCTG 58 16506924 16506994 ATGATGAACAATGAGCGGG 58 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 3 4 4 80 2R 16354375 16354395 AATCGATGTCTTCTTCGAGTG 58 16354436 16355133 AGAATCTTACCATTGTGCCG 58 NA Drosophila melanogaster 61 CG16741 FBgn0042198 FBtr0086289 1 1 1 60 2R 16234778 16234798 CGGAGAAGATTAACGATCAGG 58 16234820 16234838 GTTAAATCGTCGTCCTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16898 FBgn0034480 FBtr0086325 3 1 1 80 2R 15891383 15891462 TCGATTCATGTGTCTGTTAGC 58 15891323 15891342 CTTGAGAAGTCTGAGCTCAC 58 NA Drosophila melanogaster 61 Obp56h FBgn0034475 FBtr0086335 2 1 1 84 2R 15703127 15703203 ATGGGACAGTGTAATCCGG 59 15703251 15703269 ACTCCTTGAGATCAGCCTC 58 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 3 3 3 83 2R 15554965 15555046 ATTGTGGGCAAAGAAGCAC 59 15554900 15554918 GTTCTGGCCACTAACATGG 58 NA Drosophila melanogaster 61 CG18607 FBgn0034429 FBtr0086514 1 1 1 60 2R 15176890 15176910 ATCCCGATAATGTGAATGCAG 58 15176931 15176950 GCGTTATCCTCCACATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dpt FBgn0004240 FBtr0086620 3 1 1 70 2R 14753362 14753380 ACTTTGGCTTATCCGATGC 58 14753414 14753432 AGATTGAGTGGGTACTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15080 FBgn0034391 FBtr0086613 2 1 1 81 2R 14680408 14680483 AAGAATCCACCGTGTCTCC 59 14680528 14680546 GACCACTGGGATTCCTGAC 59 NA Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528 2 1 2 156 2R 14567573 14567647 TACCAACGAGATGGCTACG 59 14567435 14567454 GGCCATAATCGTATGACTGG 58 NA Drosophila melanogaster 61 GstE2 FBgn0063498 FBtr0086670 1 1 1 60 2R 14287107 14287128 AACTTGGACTACGAATACAAGG 58 14287147 14287167 ACGCATCCTTAAAGTGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18538 FBgn0034324 FBtr0086760 3 1 1 112 2R 14184844 14184917 GAAACCATGGTACGTCGAG 58 14184991 14185011 TGTTCAGATGTTCGTATAGCG 58 NA Drosophila melanogaster 61 CG14500 FBgn0034318 FBtr0086752 2 1 1 60 2R 14076837 14076855 GTCTACCTTCCCTGGAGTG 58 14076878 14076897 TCAGTGTAAGACAATCACCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nup75 FBgn0034310 FBtr0086775 3 1 1 103 2R 14053258 14053338 GAACAACATCGATCTTCCGG 59 14053174 14053192 CCAGATAGTCGATGCCCAG 59 NA Drosophila melanogaster 61 CG10934 FBgn0034263 FBtr0086859 3 1 1 60 2R 13610344 13610363 CGATAATGGTCACTCATGCC 58 13610386 13610404 TAGTATCTGTACGTCCGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 3 2 2 102 2R 13477350 13477421 TGGAGAAGAATCTCACCCA 57 13477266 13477285 AAATTCAGTGGTTTGTCGTG 57 NA Drosophila melanogaster 61 Bap55 FBgn0025716 FBtr0086960 3 1 1 91 2R 13318057 13318154 GCCAAATAATGCTGACCAG 57 13317984 13318004 CTTTCATATAGGTCTGCACCT 57 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982,FBtr0086981 1 2 2 80 2R 13000840 13000860 CTATGTGAGCTTCACTATGGG 58 13000900 13000983 GTTTGATATGTCTGCAACCAC 57 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 3 4 4 92 2R 12746186 12746205 GATTTCTCCAGCTCTGACGA 59 12746259 12746340 AGGATTGTAATCTGAGCCCG 59 NA Drosophila melanogaster 61 CG34458 FBgn0085487 FBtr0112764 1 1 1 60 2R 12560010 12560029 GCAATGATTAGCGGATTTGG 58 12560052 12560070 ATTTCAAACGGTTGGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9068 FBgn0034106 FBtr0087138 1 1 1 80 2R 12173671 12173692 TACTACAGTCATGTAGTGGAGC 59 12173733 12173815 CCATTCCGCAGACATTTCG 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112832,FBtr0112831,FBtr0087302,FBtr0087303 1 5 5 80 2R 11772898 11772919 AGCTGGACAATAACCAAATCAC 59 11772065 11772858 TGTTCAGCGTGAGTATCTCC 59 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 3 2 2 95 2R 11743552 11743576 CTATAACGCCTTAAAGGATAAGGTG 59 11743629 11743964 CCATATCCACCGCAAAGTG 59 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 3 2 2 73 2R 11575756 11575779 CTCAATATAACACAGAGTTCGAGC 59 11575642 11575724 CAGCAGCTTTGTGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 1 2 2 80 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454669 11454758 AATCCTGATCGATTCAGCCT 59 NA Drosophila melanogaster 61 Obp50c FBgn0050072 FBtr0087553 1 1 1 80 2R 10260048 10260122 CAGAATTTCACCCTGCCTC 58 10260164 10260184 GCATTGTCAGGATGAATAGCT 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290109,FBtr0100370,FBtr0290111,FBtr0100372,FBtr0100369,FBtr0290110 3 6 7 96 2R 10178690 10178709 CATTTCGTTCGAGAACACCT 58 10178766 10178947 AAAGTGTACCATTTCGGTTCC 58 NA Drosophila melanogaster 61 DJ-1alpha FBgn0033885 FBtr0087615 1 1 1 83 2R 9830630 9830705 GTTCTACGAAGAGGAAAGATCCT 59 9830569 9830587 GATGACCACAGATCGGGAG 59 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 1 2 6 87 2R 9148387 9150154 GACAGTCTTCCAGGTTACCC 59 9150204 9150222 GTCCTCCTCGTTGATCTCG 59 NA Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087746 1 1 2 60 2R 9144491 9144511 GAAGAAACAACTACGGAGCAC 59 9144533 9144631 AAAGCATCGTATCCTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG30488 FBgn0050488 FBtr0087818 3 1 1 82 2R 8735313 8735406 TCGGAAATTCATGCAGTAGGT 59 8735251 8735269 AGGATGCCAGTCTTCAAGG 59 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644,FBtr0302645 2 2 2 88 2R 8636958 8637039 CAGCAGAAGATTGTCTACTCC 58 8637088 8637107 TTCGAACGGATGTTAACCAG 58 NA Drosophila melanogaster 61 CG8778 FBgn0033761 FBtr0087880 3 1 1 86 2R 8539594 8539612 GAGCGGATTTGAAAGAGCG 59 8539463 8539482 CAATGGCAATAAGCAGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 1 2 2 87 2R 8529479 8529553 TTTCGCCAAGCAATTTGTG 58 8529410 8529431 GAAGGATGTCGCAATAAATACG 58 NA Drosophila melanogaster 61 CG33672 FBgn0061360 FBtr0091651 1 1 1 60 2R 8523376 8523396 AAGAAATCCATGCATTCTCCC 58 8523336 8523355 GCTTTCACTTTCTCCCACTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17760 FBgn0033756 FBtr0110824 1 1 1 80 2R 8514602 8514620 TTCATGGCCATACAGTCGA 58 8514662 8514750 GGCAAGTTTACTATGCTCCTG 59 NA Drosophila melanogaster 61 DebB FBgn0000426 FBtr0088010 1 1 1 77 2R 8071535 8071553 AACACGGAGGAAGTGATCG 59 8071476 8071494 ATACAGCACGTTGTTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cuff FBgn0260932 FBtr0088034 3 1 1 117 2R 7774348 7774436 ACAACATTGAATGGGTCTGC 59 7774515 7774534 ACTTGACCCACCACTTAAGG 59 NA Drosophila melanogaster 61 CG34054 FBgn0054054 FBtr0100109 1 1 1 80 2R 7297500 7297605 GTATAATACTTGCTGGCCAGTC 59 7297441 7297460 CATTCGGTGATATGGCTGTC 58 NA Drosophila melanogaster 61 sha FBgn0003382 FBtr0088120,FBtr0273343 1 2 2 80 2R 7219880 7219953 AAAGATCAAGACATCCGTGC 58 7219995 7220014 ATTGCAGCGTTATCTGTTCC 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 2 4 4 80 2R 7097351 7097430 AGTTCAGAGTTGCCGAGTC 59 7097474 7097492 AGACAGTGTGGAAGGTGAG 59 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 1 3 3 85 2R 6771532 6771620 CAAGGATCGTACCATAACGGA 59 6771667 6771685 TTGGAGCATCGATGGTCAG 59 NA Nonspecific Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 1 2 2 80 2R 6706100 6706120 AAATGGTCACAATCAGAGCTC 58 6705985 6706063 GGAGTATCTCCATAATTATTCCGG 58 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 1 3 3 80 2R 6338169 6338262 AGGAAACTCTACGAATGCGA 59 6338108 6338128 CGTGGTAACCATTGATGACAG 59 NA Drosophila melanogaster 61 Fmrf FBgn0000715 FBtr0088383 1 1 1 80 2R 5793894 5796649 ACAGGTTTCAGAGATGGGC 59 5796693 5796711 ATGATCTCGCTGTGGATGG 59 NA InUTR Drosophila melanogaster 61 CG1698 FBgn0033443 FBtr0088474 3 1 1 103 2R 5683312 5683330 AAGCCCGTGTACTACTTGG 59 5683395 5683818 TGTCCATATCCAATGCCTCTC 59 NA Drosophila melanogaster 61 CG30339 FBgn0050339 FBtr0088534 2 1 1 81 2R 5490120 5490138 TAAGACGCTTATGCCTGAG 57 5489995 5490076 AACATAGGTTCCAGATCTGC 57 NA Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 3 2 2 81 2R 5491678 5491761 CGTTCAGGAATATTCGCCAC 59 5491804 5491823 CAATGTGACCCATTCGTGTG 59 NA Drosophila melanogaster 61 CG12929 FBgn0033429 FBtr0113060,FBtr0088541 1 2 2 96 2R 5474091 5474163 ATATCGCTGCACAACTCCT 59 5474013 5474031 GTATCACCAACCGACTCGA 59 NA Drosophila melanogaster 61 CG1888 FBgn0033421 FBtr0088547 3 1 1 129 2R 5434331 5434349 CTGCAACCTGGAATCTGAC 58 5433791 5434238 AATGGCTTCATCTTGCAGG 58 NA Drosophila melanogaster 61 Wnt2 FBgn0004360 FBtr0088512 3 1 1 210 2R 5389084 5389486 ATACCCACAGCTTCTCGTG 59 5389660 5389678 CATACCGCATCCCAAAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 wun2 FBgn0041087 FBtr0088506 1 1 1 80 2R 5304230 5304250 CATCCATATCGAGACTCCACC 59 5304290 5304371 CACAAGCATCACAGTAAGAGG 59 NA Drosophila melanogaster 61 CG8801 FBgn0028473 FBtr0088554 2 1 1 139 2R 5285614 5285701 ATTTGGTGGACAATGTGGC 59 5285493 5285511 ATACGTCAGATTGGAGGCC 59 NA Drosophila melanogaster 61 CG8027 FBgn0033392 FBtr0088609 3 1 1 93 2R 5092885 5092966 CTCTAATTTGCCTACAATAACCAGG 60 5092816 5092834 ATATTTGGGTCGGACTGCA 59 NA Drosophila melanogaster 61 CG30356 FBgn0050356 FBtr0088717 1 1 1 60 2R 4616734 4616755 GTGGAATTACATGAGTCTGTCG 59 4616695 4616713 GTTAAATCTTCGCGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14752 FBgn0033307 FBtr0088691 3 1 1 85 2R 4478576 4479074 TTCTTTGGCAAACACGAGC 59 4479123 4479141 ACATGGACCTTCTGAACGT 59 NA DesignRelaxed Drosophila melanogaster 61 spaw FBgn0050365 FBtr0088773 1 1 1 60 2R 4247553 4247572 CTAACGAGGGATATCACCGA 58 4247512 4247533 AAGACTGATTTGCTTCCATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14759 FBgn0033278 FBtr0088796 3 1 1 60 2R 4147718 4147736 AAGAGCTTCCTCAACTTGC 58 4147758 4147778 TAACTCGTGTCATGTCCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14759 FBgn0033278 FBtr0088796 2 1 1 60 2R 4147670 4147688 CGTAAGAGTTCATGGACCG 58 4147712 4147730 TGAGGAAGCTCTTGACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2183 FBgn0033273 FBtr0088789 1 1 1 81 2R 4055559 4055577 CCTTTGCAAATACGGACCG 59 4055622 4055703 GCGTTTCACCTTATCCGAG 58 NA Drosophila melanogaster 61 CG18316 FBgn0033261 FBtr0088782 1 1 1 60 2R 3994241 3994261 TACTGGCCTCCAATCATATGG 59 3994281 3994301 GTGAATATTTGAAAGGACGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 3 2 2 100 2R 3860602 3860620 TCTATCTGGAGGACAACGA 57 3860682 3860761 ATATAGAACCTGCAACTCCTC 57 NA Drosophila melanogaster 61 CanB2 FBgn0015614 FBtr0088930 2 1 1 62 2R 3674028 3674743 GGAAATGTGTTCCAATTTCGAC 58 3674766 3674784 AGTTTCCGGAAACGTTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 1 2 3 152 2R 3613393 3613411 CTGAATTCGTACAGCAGCG 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG30160 FBgn0050160 FBtr0086178 1 1 1 61 2R 2893149 2893167 GTGGGATGAGAACAATGCC 58 2893192 2893282 AAGAGAAGGCCAACTGGAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 1 2 2 86 2R 2864775 2864794 CATGCTCGAAATACACCAGC 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 3 2 2 78 2R 2811096 2811114 AGAAAGTCATCGTTACCGC 58 2811156 2811394 TAGATGCGCTCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 3 2 2 99 2R 2561685 2561774 TATTCGCAGTGACGAGTCTC 59 2561835 2561854 GAATAGGCAAAGGCGTAGTC 58 NA Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0086115 2 1 3 184 2R 2556718 2556844 TATTGAAACAAGTGGAGGACAC 58 2557046 2557064 CATACGGCACGAACTTGTG 59 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269,FBtr0111268 3 2 2 87 2R 123440 123514 GACAATTCTAGCGAGGAGG 57 123371 123392 GTCAGTCAGAATCATTGTTAGC 57 NA Drosophila melanogaster 61 tsh FBgn0003866 FBtr0085907 3 1 2 88 2L 21832187 21833384 AATTATAAAGCTCTGCCCACAG 58 21833433 21833451 GAGGAGTTTGAGTCGTGTG 58 NA InUTR Drosophila melanogaster 61 His4:CG33871 FBgn0053871 FBtr0091875 1 1 1 60 2L 21529341 21529359 CGTAATTCGTGATGCCGTG 59 21529299 21529318 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 bur FBgn0000239 FBtr0301342 1 1 1 80 2L 21176961 21177212 CTCTTTAGTCGCCTCAGTC 57 21176899 21176917 CTTCAGATTCTCGCCTACC 57 NA Drosophila melanogaster 61 CG9323 FBgn0032883 FBtr0081459 3 1 1 88 2L 20755421 20755496 CAACTACAAATTTCTGGCATCG 58 20755354 20755374 CTATAATGGCCCTCAGTAGGG 59 NA Drosophila melanogaster 61 CG10651 FBgn0032853 FBtr0081378 2 1 1 81 2L 20134271 20134339 AATCAGCAGGAACTGTCCA 59 20134208 20134227 CATACTCAACTATGGCGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG13970 FBgn0032851 FBtr0089388 3 1 1 60 2L 20103899 20103918 GCAAGGAAGTGTCTGAAGAG 58 20103858 20103878 TCCAGATCATCTAGGTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10680 FBgn0032836 FBtr0081303 2 1 1 81 2L 19964998 19965068 TGTATCTCGACCGGTACCT 59 19965111 19965131 TCTACCAGTCGGAATACTGGA 59 NA Drosophila melanogaster 61 CG17564 FBgn0032768 FBtr0081225 3 1 1 106 2L 19299687 19299705 AGAAGCTCGATGTTCTGGG 59 19299427 19299617 CGAGTTCGGTGGAATTACG 58 NA Drosophila melanogaster 61 CG15169 FBgn0032734 FBtr0081136 1 1 1 60 2L 18991477 18991496 ACTCAAGTTCCTCAAACCGA 59 18991516 18991537 AGTCCGAAGTATCCATATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15167 FBgn0032709 FBtr0081101 1 1 1 93 2L 18740440 18740461 CCAGAGATCTACCTATTAGCGT 58 18740515 18740533 TAAGTTCTGCGGCTTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10414 FBgn0032691 FBtr0081079 3 1 1 88 2L 18611387 18611405 ATCATGCCCAGGATAACCC 59 18611251 18611336 CATGTAGGGAATTGTTCGCG 59 NA Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081089 2 1 3 125 2L 18443058 18443160 TAAATAAGCCGCCAAGATGAC 58 18442953 18442971 TTGATTGCCTTGTCCTTGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 elfless FBgn0032660 FBtr0302031,FBtr0302030 1 2 2 80 2L 18010982 18011003 TCCAAATGAGTATTACGGAGAC 57 18010855 18010943 GAATACTCCAACAGGAATGGG 58 NA Drosophila melanogaster 61 CG15144 FBgn0032648 FBtr0080992 1 1 1 80 2L 17528769 17528788 GAGCAGAATATTGGTCAGGG 58 17528482 17528726 ATTATTTGTACCGCTGGCT 57 NA Drosophila melanogaster 61 CG13282 FBgn0032612 FBtr0080929 3 1 1 94 2L 16833289 16833447 GATGAGGGAGGAGTACCTG 58 16833213 16833231 GAACGGCACTTATGTAGCA 58 NA Drosophila melanogaster 61 CG17904 FBgn0032597 FBtr0080891 1 1 1 60 2L 16733499 16733520 GAGTTTAAGAATGTCACCACTG 57 16733540 16733559 AGCTGGCCATAATCTTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17996 FBgn0032595 FBtr0080937 2 1 1 67 2L 16730942 16730960 ATGAGCCTTGAACAACAGC 58 16730840 16730912 GTATCATTTGGATCGCCCAG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33552 FBgn0053552 FBtr0091522 3 1 1 60 2L 16682968 16682988 GCATACTACATTACTTGCAGC 57 16683009 16683028 CGGATCATCTGTGATTTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 2 2 2 84 2L 15895693 15895767 CGAGTCATACTTTGTCGAAGAG 59 15895869 15895887 GATCAGATGCACAGTGGTC 58 NA Drosophila melanogaster 61 CG15262 FBgn0028852 FBtr0080733 2 1 1 60 2L 15299047 15299068 CAAGTATGAACATTTCTGGGTC 58 15299086 15299107 TCCGTGATATAAGTAGTTGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 UK114 FBgn0086691 FBtr0080746 2 1 1 123 2L 15274712 15274730 TGGAGGCTGTTCTAAAGGC 59 15274378 15274625 TCCTTATTGAACACCCGCT 59 NA Drosophila melanogaster 61 CG33678 FBgn0053678 FBtr0091658 3 1 1 73 2L 15070077 15070095 GAACATAGGAGCGATCCAG 57 15070458 15070476 GCCAATGATGGTATGGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31832 FBgn0051832 FBtr0080726 3 1 1 60 2L 15031381 15031402 ATTCAATTGAAGCATGGTCCTG 59 15031342 15031363 CCACTTGAAAGTCATCAAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NC2beta FBgn0028926 FBtr0080695 2 1 1 60 2L 15008079 15008098 TCATCTGATCAGTTCGGAGG 59 15008119 15008139 GTTTATCGTCTTCTTGTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 noc FBgn0005771 FBtr0080643 3 1 1 87 2L 14491302 14491320 TCAACCGGATTATCTGGCC 59 14491672 14491691 AATTTGGGAGCAAGTCTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 nimC1 FBgn0259896 FBtr0080615 1 1 1 80 2L 13976523 13976545 TACCAGCATAGATCTTTCTGGAG 59 13975868 13976483 CCTGTAGGCAGTCTCTTCG 59 NA Drosophila melanogaster 61 CG7953 FBgn0028533 FBtr0080550 1 1 1 268 2L 13848092 13848255 AGGAGGGAGTTGAAGTTGC 59 13848485 13848505 ATCGAAGGTAATCTTGCTGGT 59 NA DesignRelaxed Drosophila melanogaster 61 mRpS23 FBgn0260407 FBtr0080566 3 1 1 81 2L 13834877 13834953 CACAATCTTCACCAGAGTTCAG 59 13834817 13834837 GTACACATCGTACCAAATGGG 59 NA Drosophila melanogaster 61 CAH1 FBgn0027844 FBtr0080539 2 1 1 184 2L 13803946 13808810 ATACACCGAAGAGAACGGA 58 13808958 13809043 AGCAATAGCCAGGATTGAC 57 NA Drosophila melanogaster 61 CG31845 FBgn0051845 FBtr0080533 1 1 1 87 2L 13777757 13777775 TTCAGTCCACTCACCTGAC 59 13777825 13777906 ACAGCATTCCTTCTGTTTGC 59 NA InUTR Drosophila melanogaster 61 CG16853 FBgn0028941 FBtr0080508 1 1 1 60 2L 13542661 13542684 CATATGGATAAGAACGATGAGGAC 59 13542701 13542721 TAACTTGACGTTGAGAATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tap42 FBgn0051852 FBtr0080466 1 1 1 80 2L 13367834 13367925 CAGCGAATTTCAGAACAAAGTG 59 13367965 13367984 AACATGCTAACCTGGTTCAC 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 3 4 4 85 2L 13209523 13209541 GTAGTCAGTTCTTGCCGAC 58 13209587 13209668 CACATAAACAATCTTATCGCCG 58 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 1 1 2 98 2L 12673617 12673635 AATGGTCGACATTGTCGTC 58 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 CG12307 FBgn0032370 FBtr0080266 1 1 1 60 2L 11651625 11651643 GAGCTCTGTGAGTTGTCCT 59 11651583 11651601 GAGATTGTTAGACGGCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek2 FBgn0015400 FBtr0080252 1 1 1 60 2L 11622181 11622200 GTTTCAGGACTACAGCTCTC 57 11622220 11622241 TAACTCCCTGATAGGATTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppt2 FBgn0032358 FBtr0080212 3 1 1 81 2L 11280690 11280708 AGGTCGATCAGGTTAGGGA 59 11280753 11280833 CCTTGTGAGTATCCCAGCA 59 NA Drosophila melanogaster 61 Nup154 FBgn0021761 FBtr0089881,FBtr0089882 3 2 2 80 2L 11007424 11007508 TATTTCCTCGACTACTCGAGTG 59 11007549 11007567 GTGTTGCCCATCATGATGG 59 NA Drosophila melanogaster 61 RpL9 FBgn0015756 FBtr0080163,FBtr0080164 1 2 2 80 2L 11003231 11003521 CATGATCAAGGGAGTCACG 58 11003169 11003187 GAGGTGACACAGTTGATGG 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 2 5 5 80 2L 10993661 10993749 AGACCGGAATGAGTATGTGG 59 10993790 10993810 TCATCCTCGGCTATGATAAGG 59 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 1 3 3 80 2L 10848458 10848552 TCAGTCTGGAAACAAGAACG 58 10848397 10848417 TCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 Dpy-30L1 FBgn0032293 FBtr0080112 2 1 1 64 2L 10733157 10733176 CTAAAGCATAGCAACGGGTG 59 10733203 10733221 TAGGAGTTGTTGTCCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7296 FBgn0032283 FBtr0080129 1 1 1 120 2L 10686951 10686969 TTCGAGGAAGCAACAACTC 58 10686849 10686867 ATTGGCATTAGCATTCGCG 59 NA Nonspecific, DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 RluA-2 FBgn0032256 FBtr0080032 2 1 1 80 2L 10481500 10481520 GTTAACTCTGAGAAAGTGCCC 59 10481562 10481631 GACTTCGTGTCTATGCACC 58 NA Drosophila melanogaster 61 CG5362 FBgn0032237 FBtr0080050 2 1 1 68 2L 10394930 10396218 AATGGCTGAACCAATTCGT 58 10394880 10394898 ATGTACAGCAGGGAGTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5381 FBgn0032218 FBtr0080060 2 1 1 80 2L 10319064 10319138 AACTTGTGGTCCAAGATTACC 58 10319004 10319022 TTCGGTTGTTAACAAACGC 57 NA Drosophila melanogaster 61 CG34109 FBgn0083945 FBtr0300423 2 1 1 81 2L 10104947 10106167 ATTGAATTCCAGTGTCAGTGTG 59 10106208 10106227 GTAGTCATCTCGCATGTTGG 58 NA Drosophila melanogaster 61 CG4382 FBgn0032132 FBtr0114535 3 1 1 81 2L 9599897 9599973 TTAAAGGGAAACACTACCTGG 57 9599836 9599857 CACAATATCAAGGGATTGTTCC 57 NA Drosophila melanogaster 61 gcm FBgn0014179 FBtr0079855 3 1 1 75 2L 9581108 9581204 GTCCCAATAGAAATTGCAATGG 58 9581054 9581072 AAGTGGGTCACTGGATAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9586 FBgn0032101 FBtr0079774 1 1 1 99 2L 9165837 9165955 TCAATACTCCCAGACTGCC 58 9165756 9165777 CGATTTGTTGGTATTCTTGGTG 58 NA Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 2 2 2 91 2L 8996806 8996824 CTACATCAAGAGTGCCGTC 58 8996670 8996751 GCAGTGCCATATTCTTCGA 58 NA Drosophila melanogaster 61 CG9314 FBgn0032061 FBtr0079731 2 1 1 124 2L 8706523 8706606 ATGTACATTCAGGTGATGCTC 58 8706690 8706710 CGATCTAGAACAATCTTGCCA 58 NA Drosophila melanogaster 61 Rcd4 FBgn0032034 FBtr0079652 3 1 1 66 2L 8383245 8383265 AGGATTCTAACTTTATCGCCC 57 8383356 8383375 AATACAACACGATTCGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7627 FBgn0032026 FBtr0079608 3 1 1 91 2L 8359693 8359713 CTGGCTACCATATTCGTACAC 58 8359557 8359640 GCAGCGATTCCAATCTCAC 59 NA Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079634,FBtr0079633 1 2 2 60 2L 8212258 8212277 TACATGCGCTACTACGACAG 59 8212217 8212235 CAAAGAGCCACATGCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 1 2 2 81 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195911 8195930 GTGGGTGTAAATGATCTGCA 58 NA Drosophila melanogaster 61 CG8668 FBgn0031988 FBtr0079576 2 1 1 96 2L 8132114 8132134 TCATACCCACTTCCAATTTGC 59 8132192 8132610 ATATCCGATGGATTGCCCG 59 NA Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0100151 2 1 2 141 2L 7999028 7999046 AACTGCGACTAAGAAGCGA 59 7999151 7999169 ACCTTGTTTGCCCATTTGG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 3 4 4 80 2L 7403302 7403320 TGAGAAACAAGTGGCACCT 59 7403358 7403562 GGACTTTCAGAAATTAGATACCCAG 59 NA Drosophila melanogaster 61 CG3476 FBgn0031881 FBtr0079389 2 1 1 80 2L 7027915 7027993 GGACACAATAAAGGTCCGT 58 7028032 7028055 CAATCTATGACTCCCTTGTATCTC 58 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0302162,FBtr0290119 2 3 3 80 2L 6983241 6983325 AAGTGTCAGGAGGTCTACTG 58 6983180 6983198 GCGATAGGTTACGTTCGAG 58 NA Drosophila melanogaster 61 SA FBgn0020616 FBtr0079349 3 1 1 81 2L 6950979 6951056 CCCTATTGCTAGCATTGTTGAC 59 6951098 6951116 AAACTGCATCAGTGCAACC 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 1 3 3 80 2L 6721236 6721257 ACTTATGCAACAGGAACTTGAG 59 6721121 6721195 AACTTTGCAAGCGTTTGGT 59 NA Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 3 3 3 102 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616143 6616223 GCTCGTATTCCTCAAACAGC 59 NA Drosophila melanogaster 61 CG9547 FBgn0031824 FBtr0079263 3 1 1 143 2L 6494022 6494040 CTACGACTTTGGATCCGAG 57 6493779 6493797 TTGCTATCGTACTTGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9536 FBgn0031818 FBtr0079267 1 1 1 80 2L 6475793 6476230 GACCAATAGGAACGTTCCC 57 6475731 6475750 GGATAAGTGCCATCTAGCAG 58 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 1 4 4 77 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 mRpL28 FBgn0031660 FBtr0078996 2 1 1 69 2L 4975040 4975059 CATTAGCAGCAGAATCGTCG 59 4975089 4975161 GAGGATTCCAGCTTTGTAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Marcal1 FBgn0031655 FBtr0078992 2 1 1 80 2L 4957682 4957761 AATCCTAGCACTCTTGCCC 60 4957802 4957823 AATCAGATAGCGACAAATCACC 59 NA Drosophila melanogaster 61 Jon25Biii FBgn0031653 FBtr0079056 2 1 1 60 2L 4950667 4950685 GTCTTCGTAAAGGACCTGC 58 4950625 4950644 CGTATCCGTTGGTGATACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art2 FBgn0031592 FBtr0077476 3 1 1 83 2L 4279136 4279154 TGTTGAAGGATTCAGTCCG 57 4279013 4279089 CATCCAGGACAGTCTTGTG 57 NA Drosophila melanogaster 61 CG31778 FBgn0051778 FBtr0077543 3 1 1 93 2L 3704943 3704963 TCAGTCAGCTAAGAATCACCA 58 3704624 3704888 CATGCATCTCGAACAACCG 59 NA Drosophila melanogaster 61 CG31776 FBgn0051776 FBtr0077522 2 1 1 80 2L 3470663 3470737 GGATACCAGACCTATAAGTTGC 58 3470775 3470796 TCGTGAAAGGCTATTATCACTG 58 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 1 1 1 114 2L 3388408 3388428 AGTACTCCTGCTGAATAAGAC 57 3388252 3388332 ATTTAACTCCGCAGACAGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3277 FBgn0031518 FBtr0114460 1 1 1 80 2L 3313754 3313773 AATGTCACGCTCTACATGGA 59 3313815 3313980 ATTGTACGAAGTGCCTTGTG 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 3 6 6 91 2L 3070721 3070830 AAGGAGAAGGAAATCCAGC 57 3070648 3070666 TCTTTGTCATACGTCAGCC 57 NA Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 1 1 1 60 2L 2848444 2848521 CTACAGAACGCAAGATGGA 57 2848544 2848563 AACGTAGTGAAACGATACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 1 1 1 73 2L 2845448 2845527 AGTTAGTGATCGGTGCTCC 59 2845393 2845411 AACCTCTTCTACTGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 2 4 4 81 2L 2792363 2792493 TTCACCTTTAAGAGTTTGCCC 58 2792302 2792320 TCGAGAAGCGATCGAAGTC 59 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077729,FBtr0077727,FBtr0077726,FBtr0077728 1 4 4 80 2L 2792362 2792492 TCACCTTTAAGAGTTTGCCCT 59 2792302 2792320 TCGAGAAGCGATCGAAGTC 59 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 2 3 4 148 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740642 2740660 TTCTCCTTGGTGAACACCT 58 NA Drosophila melanogaster 61 Rad1 FBgn0026778 FBtr0077747 1 1 1 111 2L 2574185 2574277 ATTATGGGATGGTGCAAGTC 58 2574093 2574111 ACACGGAACTCCATGAAGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 robl22E FBgn0028570 FBtr0077800 3 1 1 62 2L 2290589 2290607 GAGGAACTATTGAAGCGCT 57 2290545 2290564 GTTGTCCACCACAACTATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31686 FBgn0051686 FBtr0077752 3 1 1 60 2L 2244809 2244830 TTGCTTCCAAGTCATCAATGTC 59 2244850 2244869 TCAGAAGTCACAGTGGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uch FBgn0010288 FBtr0077844 3 1 1 90 2L 2213548 2213625 CAGCGAAACCTATGAGAAGC 59 2213477 2213495 GCGCATGTAGAAGAGATCC 58 NA Drosophila melanogaster 61 Or22c FBgn0026396 FBtr0077826 3 1 1 82 2L 2055039 2055057 CAACCGCTGATTATGGGTC 58 2055099 2055335 GAGGGCAGTATGATATTAAAGGG 58 NA Drosophila melanogaster 61 lectin-22C FBgn0259230 FBtr0299675 3 1 1 60 2L 2037121 2037139 TGTGGAGGATTCTGTCTGG 58 2037079 2037097 TTTGGGAAATGGTCAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17660 FBgn0031356 FBtr0077912 3 1 1 85 2L 1708394 1708472 CGACTGAGGAGGAATATGGT 58 1708328 1708349 AATATGACGGAAGCGATAACAG 58 NA Drosophila melanogaster 61 Or22a FBgn0026398 FBtr0077873 2 1 1 80 2L 1521430 1521569 TGCTATTGGACTATGTTGACG 58 1521610 1521629 GTACAGTACCGATCAGGAGG 59 NA Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 2 1 1 139 X 11626502 11626522 CTACTACCTGTTCATCTGGGA 58 11621393 11626403 TTTATCCAATTCCGGTCACTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rab-RP4 FBgn0015794 FBtr0070849 1 1 1 80 X 5565538 5565646 GGCAAGTCCAGTTTGATACG 59 5565477 5565496 CTTGAAGTCCATGCCAATCG 59 NA Drosophila melanogaster 61 CG6379 FBgn0029693 FBtr0070671 1 1 1 92 X 3994031 3994051 TCTCTATTTCACGGACATGTG 57 3993858 3993876 GTGAAGCCGAATCCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17777 FBgn0040900 FBtr0290085 2 1 1 195 X 2080965 2081190 AAGTTCTTGTGCGTGTTCG 59 2081349 2081367 GTCCATAGGCACCGTATCC 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 3 6 6 86 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428547 24428565 GTTGGTCATTCTGCTTGGG 59 NA Nonspecific Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 1 2 2 95 3R 11865261 11865347 GGAGCATGATCTCAAACCC 58 11865406 11865424 AAGGTGCTACTACTGCTGG 59 NA Drosophila melanogaster 61 CG6188 FBgn0038074 FBtr0082651 2 1 1 80 3R 8500836 8500916 TTCGATAAGTGGGTCATTGAG 57 8500956 8500976 ATCGAAACCATCCTGAATGTG 58 NA Drosophila melanogaster 61 CG33289 FBgn0053289 FBtr0078367 1 1 1 80 3L 21528184 21528205 CTCGCAATACATGGATACTCAG 58 21528246 21528454 ATGTAGGGCGATTTCTCGG 59 NA Drosophila melanogaster 61 CG42263 FBgn0259148 FBtr0302430 3 1 1 80 3L 19948285 19948358 TAGTGACGTTGGGAATCGA 58 19948223 19948241 TGAATTCATCTGGATGCGC 58 NA Drosophila melanogaster 61 PGRP-SB1 FBgn0043578 FBtr0075348 3 1 1 87 3L 16720953 16721040 TTTGCTGCTTAGCTCTATCC 57 16720885 16720903 ATCCTAGAAGGCGATCGAG 58 NA Drosophila melanogaster 61 Taspase1 FBgn0036564 FBtr0075498 2 1 1 192 3L 16079615 16079633 CTTCACAAGACGTTCAAGC 57 16079371 16079459 AATGCACAAACTTTGGCAC 58 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0076861 3 1 3 104 3L 7461113 7461131 GAGGACCTGTACCGATCAG 59 7461194 7461276 GGAATACCTCAATGCATATGACTG 59 NA Nonspecific Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711,FBtr0086712 1 2 2 80 2R 14510556 14510577 GACTTAAGTGCATTAATGGCGA 59 14508825 14510516 GGTCTTTGAGCGAATTTCCA 58 NA Drosophila melanogaster 61 CG33792 FBgn0053792 FBtr0091796 2 1 1 115 2R 8520438 8520462 GGAGGCATTAACTGATATTAAGGTG 59 8520632 8520651 CCGTCAAATGGCTAATAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Gadd45 FBgn0033153 FBtr0089049 3 1 1 155 2R 3137203 3137221 ACGAGAACGACATCTACGT 58 3137340 3137358 AGTCGACTAGCTGGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 esc FBgn0000588 FBtr0080325 1 1 1 176 2L 11828898 11828978 CAAATACGACACCCACGTG 59 11828740 11828758 GGATCTGCATAGCAGTGGA 59 NA Drosophila melanogaster 61 Art8 FBgn0032329 FBtr0080162 1 1 1 101 2L 11010889 11010963 AAACTTGGAGATCCACGAG 57 11010806 11010825 ACGATCTTGTCCTTGAACAG 58 NA Drosophila melanogaster 61 smo FBgn0003444 FBtr0078129 1 1 1 144 2L 277856 277943 AACATTATGATGTTCCTGGAGG 58 278048 278066 TGAGAGTCCCATTGATGGG 59 NA Drosophila melanogaster 61 CG9231 FBgn0036887 FBtr0074972 2 1 1 88 3L 19578910 19578928 GAGCCAAACAATCTGGAGC 59 19578776 19578861 ACATCCTGACTAACGAAATTGG 58 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079850,FBtr0079851 3 2 3 108 2L 9699172 9699190 ATCGATCGGAAAGTCGAGG 59 9698201 9698221 GCTTATGATCGCGATTTACTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 2 3 3 80 4 499215 499233 AACAAACTCCCAAGTAGCC 57 498699 499174 AGCTTCGTATACTGTACATCCT 58 NA Drosophila melanogaster 61 Caf1-105 FBgn0033526 FBtr0088310 3 1 1 80 2R 6355294 6355371 AGCACCGATAGACAAATGC 58 6355232 6355251 TACTGGGAGTACACATTTGC 57 NA Drosophila melanogaster 61 CG33681 FBgn0053681 FBtr0091661 1 1 1 92 2L 14005731 14005749 CTGTTGGAGCTTGTAGCCT 59 14005802 14013475 CTCGTAATCGTTAACAGAACCG 59 NA Drosophila melanogaster 61 CG3792 FBgn0031662 FBtr0078997 2 1 1 62 2L 4977682 4977762 GATGTTCCGTGCTTCAAGG 59 4977788 4977806 GGAACCTGCGATAATTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070705 2 1 4 82 X 4582311 4585675 TTTACCGTTCCAGTTTACCA 57 4585719 4585738 GTGTGCTTACAACTTCACTG 57 NA InUTR Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 3 2 2 86 3R 20313318 20314186 GTGATCAGATCGATTTGAAGC 57 20314234 20314252 GATAGTACTCACGCAGGTC 57 NA Drosophila melanogaster 61 CG5798 FBgn0038862 FBtr0084016 2 1 1 80 3R 16962659 16962741 GATTTGAGGTACGTTGTGGG 59 16962783 16962802 GATGGTGAGGAATTCGTGTG 59 NA Drosophila melanogaster 61 CG3984 FBgn0038291 FBtr0083025 2 1 1 89 3R 10964312 10964330 CAGATGGTGACCATCCCTC 59 10964383 10964470 GCAGTCGTAGAAGTTCTGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6485 FBgn0036706 FBtr0075249 2 1 1 60 3L 17313561 17313581 CGAGACCATCAAGATAGATCC 57 17313521 17313540 GAACATGGTGTAGAACTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 2 3 3 80 2R 13461765 13461849 AGAGAACGAGCTTATCTTCCTG 59 13461887 13461908 GTCTTTGAGCACTTGAGAAAGG 59 NA Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071699 1 1 2 187 2R 17406368 17406442 CCTTATGAGTGGATCTGGGA 58 17406200 17406218 TTCTCTGGACACCATACGA 57 NA InUTR Drosophila melanogaster 61 Or45b FBgn0033422 FBtr0088519 3 1 1 80 2R 5447863 5447941 CCAATAAGAGATCCCTCGCT 59 5447983 5448002 TATCTCATTGTGGCGATCCA 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100342,FBtr0089328,FBtr0100343,FBtr0301563,FBtr0089327,FBtr0100345 2 8 8 80 4 1127212 1128333 TTGAAGCACATGATGAGAACC 59 1128374 1128393 TGTACGTTGACATACGTTGC 59 NA Drosophila melanogaster 61 mira FBgn0021776 FBtr0083847,FBtr0083848 3 2 2 60 3R 15760150 15760169 AATTTGCCATTCCCAAGGAG 58 15760109 15760127 GAAGGAGTACGGAACAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 2 2 2 60 X 22386603 22386681 GCACTTCAGATATGGTTCGG 58 22386562 22386581 GATACCCTTGATCTTGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 2 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mal FBgn0002641 FBtr0077306 2 1 1 180 X 20302545 20302626 GATTTCCAGACACGTCTTTGG 59 20302768 20302786 GAATCCCACAAACGAACCC 59 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 3 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 CG15046 FBgn0030927 FBtr0074628 1 1 1 121 X 18382012 18382087 AGGGTGAAGACACTGACTG 59 18381909 18381927 CACGCAAAGATGTGAGCTG 59 NA Drosophila melanogaster 61 CG9215 FBgn0030659 FBtr0074066 2 1 1 60 X 15475176 15475195 ACTCTGTCAAGGAACTGGTC 59 15475135 15475154 TTGGATTCGTCACAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073969,FBtr0073968 3 2 2 60 X 14959721 14959739 CAACCACTGGTCTATGGTG 57 14959679 14959697 GAACACCTGGATGAGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 2 2 2 87 X 13304291 13304383 CTGCTAAAGGTGATCTGGTG 58 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG11752 FBgn0030292 FBtr0073452 2 1 1 60 X 11244368 11244389 TGAATACTACAGCTTCAATCGC 59 11244410 11244428 GTACTTGGCCATTTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11284 FBgn0030056 FBtr0071222 3 1 1 269 X 8581518 8581536 ACTTCCATTGGTCGGACTG 59 8581767 8581862 ATGATAGGCAATCGGAATCCA 59 NA DesignRelaxed Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006 2 1 3 115 X 6892769 6893001 CCACCTGGAAACTGAAGAG 57 6893079 6893098 TACTCCTTGACACTAACGCT 58 NA InUTR Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 1 2 2 147 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425332 6425350 TGTTATCGACGGTGGTCAG 59 NA Drosophila melanogaster 61 CG12730 FBgn0029771 FBtr0070780 1 1 1 63 X 5411487 5411505 AAATACCTGCTCAGCATGC 58 5411605 5411623 TTCCAACAAAGCTGCACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7024 FBgn0029722 FBtr0070712 1 1 1 126 X 4599602 4599620 GAAGTTCAGTTGTGTCCGC 59 4599710 4600046 CTTGAACGTGTTCTCCAGG 58 NA Drosophila melanogaster 61 CG15473 FBgn0029719 FBtr0070689 1 1 1 130 X 4548256 4548448 ATGGCAATCTTGCCTTTGG 59 4548144 4548162 TTGAGGAACCTTTCCTCCG 59 NA Drosophila melanogaster 61 CG32791 FBgn0052791 FBtr0070588 3 1 1 81 X 3408201 3408914 GATTAAGGACACGGGTGAG 57 3408138 3408156 TTTGGTCTCGTACATGGAC 57 NA Drosophila melanogaster 61 pdfr FBgn0260753 FBtr0070436 2 1 1 80 X 2470076 2470158 CACTGGAAAGCGAATATCACC 59 2470198 2470218 TCGTGAATCATCACAATGCTG 59 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 3 2 2 82 X 1776706 1776782 TTGGCGAGATCTAAGATCCAG 59 1776644 1776667 CCAATGTACTCGATTATCATGGTG 59 NA Drosophila melanogaster 61 CG14805 FBgn0023514 FBtr0070312 2 1 1 80 X 1772161 1772179 TAGGGTGTATGTTGGCTCC 58 1772222 1772298 AGGTGATATTCCTTCATGCG 57 NA Drosophila melanogaster 61 CG14634 FBgn0040892 FBtr0110804 3 1 1 83 X 756958 756976 TCAACCAGGTGACCATCAG 59 757022 757041 TAGACGTGACTATTCGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40642 FBgn0085761 FBtr0114211 1 1 1 60 U 9503525 9503545 CTGAAGATTGAGATAGTCGGG 57 9503567 9503585 AGAACGAGCACATAAACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42407 FBgn0259838 FBtr0300135 1 1 1 265 U 5759482 5759500 AGATCTACTGACCACGCTG 58 5759235 5759256 GGATCCGATATTCTTTGGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 1 5 5 80 4 1230675 1230693 CAAGTAGCTCAAGTGGCTG 58 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 CG18404 FBgn0039761 FBtr0085618 2 1 1 87 3R 26079236 26079255 CGATTATATGCAACCCGAGG 58 26079303 26079390 AATGGCATTAGCCAAATCTCC 59 NA Drosophila melanogaster 61 CG9743 FBgn0039756 FBtr0085571 3 1 1 84 3R 26022752 26022827 GTACGACAAGAACCTCATGTC 58 26022688 26022706 AACGTGGTGGTAATTGTGC 59 NA Drosophila melanogaster 61 AdoR FBgn0039747 FBtr0085581 3 1 1 103 3R 25962133 25962217 GTGGGTGAGTATTCACCCA 59 25962048 25962066 ATGTTGTTGAAACAGGGCG 59 NA Drosophila melanogaster 61 CG31029 FBgn0051029 FBtr0085585 1 1 1 80 3R 25957551 25957569 CCTAAGAACGACCGAGTGG 59 25957427 25957510 AATCAAGCCGTGGTTTATATCC 59 NA Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 2 2 2 89 3R 25065692 25065952 TCACAAAGACATTGAACCCA 57 25065622 25065640 TTGTAGGTCGAATTGGGTG 57 NA InUTR Drosophila melanogaster 61 CG31068 FBgn0051068 FBtr0085118 2 1 1 82 3R 23061691 23061787 AAACAAGTGAGGATAGCAACAC 59 23061830 23061848 TTCTCCTGCGACTTCTTCC 59 NA Drosophila melanogaster 61 CG17189 FBgn0039485 FBtr0085105 1 1 1 93 3R 22928111 22928195 GGAAATAGATGATCTGGACATACTG 59 22928246 22928264 TACCTTCACGGATGTCACG 59 NA Drosophila melanogaster 61 His2Av FBgn0001197 FBtr0085062 1 1 1 120 3R 22692805 22693136 TTGAACAGAAATGGCTGGC 59 22693402 22693420 GAGATGACGATGGATGCGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 1 5 5 82 3R 21871476 21871494 GTGAGAAGTATCGCACACG 58 21871538 21872266 TTCATCCTCTTGCAGTTTCTC 58 NA Drosophila melanogaster 61 HLHm5 FBgn0002631 FBtr0084979 1 1 1 60 3R 21854898 21854917 GATACCACAGCGATAACGAG 58 21854857 21854875 GTTTCTTCGACTGGCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42261 FBgn0259146 FBtr0299575 1 1 1 80 3R 21803730 21803751 CGATAGCTCAAGTCTTAGTTCG 58 21803792 21803877 CGGGCTAGTTTCTGAATGG 58 NA Drosophila melanogaster 61 CG11859 FBgn0039306 FBtr0084816 3 1 1 93 3R 21091755 21091773 AATCTGAAGTCGGGTGGAG 59 21091826 21091904 GGTAGCCATCATATTTCTTTCCC 59 NA Drosophila melanogaster 61 fzo FBgn0011596 FBtr0084399 2 1 1 60 3R 19029619 19029640 CGTTTATATCCTCATCGTCGTC 58 19029580 19029598 AGTTCTGTCTTTGCGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dph5 FBgn0024558 FBtr0084280 3 1 1 82 3R 18408761 18408781 AGATAGTGAAGCAATGCAGTC 58 18408629 18408720 GAACTCTTGCATATCCTCAAGG 59 NA Drosophila melanogaster 61 CG13847 FBgn0038967 FBtr0301711 1 1 1 81 3R 18253729 18261388 TGCTAGTGAGACATTTGAACAG 58 18253669 18253690 TTGGTCACATGTAACTTCAGAG 58 NA Drosophila melanogaster 61 CG13407 FBgn0038931 FBtr0084181 3 1 1 86 3R 17929217 17929802 AATTATGCTCAAACGCAGC 57 17929852 17929870 GTGTCCTTGGTGGTAATGG 58 NA Nonspecific Drosophila melanogaster 61 CG6678 FBgn0038917 FBtr0084148 1 1 1 111 3R 17714887 17714905 CCTGTCCTATGTGGATGCT 58 17714979 17731658 AGCCGTACACTTCAAATGGA 59 NA Drosophila melanogaster 61 RpI12 FBgn0038903 FBtr0084166 3 1 1 139 3R 17603313 17603385 AGTTTCAGCCAGATGTTTACAG 59 17603195 17603213 ACACTTCCTCTCCACAACG 59 NA Drosophila melanogaster 61 CG6800 FBgn0038902 FBtr0084132 1 1 1 185 3R 17602473 17602491 AACCGGAGTGGATATGTGG 59 17602701 17602772 TTGGGAAACCGTATCTTGCT 59 NA Drosophila melanogaster 61 CG5745 FBgn0038855 FBtr0084008 2 1 1 81 3R 16929890 16930320 CATTGACGTGAACTTACATCG 57 16930363 16930381 CAGATTGTTCATCCAGCGA 57 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 2 2 2 80 3R 16751903 16751921 TAGTGAACGGTGTCATGCA 59 16751963 16752075 TTGTTGGATCATAATCCTCGC 58 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 2 2 2 68 3R 16676607 16676625 GACTAGAGACCATCGAGGC 59 16676657 16676762 CCAGTTGGTTCTTGACTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG14282 FBgn0038685 FBtr0083734 1 1 1 60 3R 15003382 15003400 GCCCAAGAGCAAGAATCTG 58 15003423 15003442 CATCTGTTCCTTGATCTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14286 FBgn0038673 FBtr0083710 3 1 1 64 3R 14850220 14850238 CCTACGGCTGAATCATCCA 59 14850266 14850284 TTTCCAGATGACAGAAGCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 2 2 2 80 3R 14419757 14419829 GGGACCAAATAAACATCCAGG 59 14419697 14419715 CTGGTTTGAGGGATCTCCG 59 NA Drosophila melanogaster 61 CG7794 FBgn0038565 FBtr0083540 3 1 1 95 3R 13850106 13850189 ATCCTTCGCCTTCAATCTC 57 13850247 13850266 CAATAAACGATACATCGGCG 57 NA Drosophila melanogaster 61 GckIII FBgn0086736 FBtr0083399 2 1 1 60 3R 12913301 12913319 CCTGAAGTCTGTGTTCGAG 57 12913341 12913361 CATAAATAGGTCGCTCACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Actn3 FBgn0015008 FBtr0083380 3 1 1 82 3R 12803270 12803289 CATTTGCGGAAAGTCAAGAG 57 12803152 12803228 CTTAATGTACCGAGTACATCGT 57 NA Drosophila melanogaster 61 CG14883 FBgn0038432 FBtr0083291 3 1 1 80 3R 12282429 12282523 AGCCATTAAGAAGTGCCTC 57 12282567 12282585 ACGACTATTTCACCACAGG 57 NA Drosophila melanogaster 61 CG8483 FBgn0038126 FBtr0082782 1 1 1 121 3R 9036041 9036629 CCGTACAATAAATCGCTTTACG 58 9035941 9035959 TCTGCACCTCGTTAAACCA 59 NA Drosophila melanogaster 61 yellow-f2 FBgn0038105 FBtr0082722 3 1 1 82 3R 8820202 8820220 CGTCTACAGAACCTCCGTG 59 8820030 8820159 GTTGGCGGTTATTTGGATACTC 59 NA Drosophila melanogaster 61 hug FBgn0028374 FBtr0082639 1 1 1 179 3R 8353584 8353604 GACTACAAAGAGCTGACAGAC 58 8353745 8354308 ATTACTCTGCAGCTGTCGT 59 NA Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 3 2 2 100 3R 8210528 8210937 ACTCACGGACTACTATTTCCC 59 8210999 8211017 AGATTGTGTTTAGCCAGCC 58 NA Drosophila melanogaster 61 CG14712 FBgn0037924 FBtr0082418 1 1 1 80 3R 7455430 7455513 CATCAACACTGAAGATACGCA 58 7455554 7455573 ACAAAGTCCACAAAGTCCAC 58 NA Drosophila melanogaster 61 CG8369 FBgn0040532 FBtr0081920 3 1 1 216 3R 4647842 4648203 TTCTAGCACTGTGCTTGCT 59 4648383 4648458 TTCTGCTCGAATGGATCGT 59 NA DesignRelaxed Drosophila melanogaster 61 tex FBgn0037569 FBtr0081861 2 1 1 81 3R 4134260 4134280 GACATTGGAAGACCTGAAGTC 58 4134144 4134219 CGAGTGAACCTTAGACATGTG 58 NA Drosophila melanogaster 61 Mcm2 FBgn0014861 FBtr0081827 2 1 1 89 3R 4092881 4092900 AAGACCGTTGATGAGATCCC 59 4092951 4093027 GTCGATGTTCGTTAGCTTGG 59 NA Drosophila melanogaster 61 CG10092 FBgn0037526 FBtr0081752 1 1 1 91 3R 3714212 3714293 ACATAAGTGCCACTACCAGAG 59 3714346 3714364 AAGGACATTGACCAGGACG 59 NA Drosophila melanogaster 61 Mlp84B FBgn0014863 FBtr0081617 1 1 2 221 3R 2942400 2942418 TTCCAGTTCAGTACTCGGC 59 2941384 2941402 TGGAATACATAGCCGCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 3 2 2 80 3R 2283140 2283223 CTCATACAGCAATCTGAACGAC 59 2283264 2283282 TAGGCCATGTTGAGTTCGA 58 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 1 2 2 80 3R 1712727 1712815 GCATCGAGATGTTACTCAAACC 59 1712668 1712687 GATTGTACTGCGTGTTCGAG 59 NA Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 1 2 2 80 3R 190217 190297 GTTATATCATGCTTTGAGTCCG 57 190337 190356 CAGCTCCGTATTGAAATGGA 58 NA Drosophila melanogaster 61 Ssl1 FBgn0037202 FBtr0078554 3 1 1 103 3L 22872484 22872502 GAGGACCAGAAGGAGTACC 58 22872622 22872640 ATGATCTCTGCAATGGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14100 FBgn0036889 FBtr0074971 3 1 1 81 3L 19582429 19582510 GCTTACCGTTTCTTAAACTTGG 58 19582369 19582388 CATTCAAGCTATCGATGCCA 58 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 1 2 2 88 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259704 GAATGTACGACCGTGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 1 2 2 101 3L 17670666 17676048 GAGTTTCAGAGTGTGCCAG 58 17676113 17676131 CCAGCTGTGGTAGAAATCC 57 NA Drosophila melanogaster 61 TORC FBgn0036746 FBtr0075196 1 1 1 60 3L 17655459 17655477 CCAACGCGGATTATACCAG 58 17655417 17655435 TCCATCTGTCCCAGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 blot FBgn0027660 FBtr0075235,FBtr0075233,FBtr0075234,FBtr0075232 3 4 4 84 3L 17391628 17391701 GTGAAGCTGCGATTGAGTG 59 17391562 17391582 GCCAGAATGGAGTTAGAAAGG 58 NA Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 2 2 2 135 3L 16777687 16777706 AACACATTGTGCAATCTGGG 59 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 CG42571 FBgn0260777 FBtr0301332 2 1 1 82 3L 15709673 15709693 CAAACTTACGGATCCCTTGTG 59 15709737 15709810 CTACGACCACTTTCCACCA 59 NA Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 1 2 2 80 3L 14746560 14746738 AACAGAGAAACCACGTTCAC 58 14746499 14746517 CGGGATTGACGAATGACAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 3 2 2 87 3L 12366174 12366252 GAAGGTCTTCCAGGCTCTG 59 12366105 12366125 AACTGGCTCATTATTCTTGCC 59 NA Drosophila melanogaster 61 CG32100 FBgn0052100 FBtr0076006 1 1 1 104 3L 12260743 12260869 TGGATGAGGTCAAAGACACC 59 12260936 12260954 TGTTCGCTATGACCTCCAG 59 NA Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 3 2 2 81 3L 11513444 11513462 CAGTCAATTCACAGCGGAG 58 11513300 11513400 GAGCACAACATATCTGGCTC 58 NA Nonspecific Drosophila melanogaster 61 dpr6 FBgn0040823 FBtr0076353 2 1 1 168 3L 9997188 10026289 GATTGTGATGAGCGACATGAC 59 10026419 10026437 GAAGTAGGGCTCCATCCAC 59 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0299607,FBtr0301858,FBtr0299606 2 3 3 82 3L 9731374 9732006 GAATACTCCAGGAGACGGA 57 9731310 9731328 CTTGCTATCCAATCCGCAG 58 NA Drosophila melanogaster 61 CG33926 FBgn0053926 FBtr0091930 3 1 1 82 3L 9436448 9438806 CAATATTAGGGCCATAGAGGAC 58 9438849 9438867 TCTCGCTGTCAGTGATCTC 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 1 5 5 80 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408556 9410759 GCATGAATTATCTCGGCCA 58 NA Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 1 1 1 60 3L 9207867 9207950 AGAGTTGTTGGTTGGTGTG 58 9207974 9207992 AACCTGCCCAGTAGAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527,FBtr0076525 3 4 5 98 3L 9067915 9068167 ATCCTGCTAGTGGATCGAC 58 9068228 9068247 GTTCCCTGTTGCTGATAAGC 59 NA Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 1 2 2 80 3L 6173209 6173292 TGTGAGTGCAAGGTTTGTG 58 6173147 6173165 CACACGCTTCTCATGAGTC 58 NA Drosophila melanogaster 61 Akh FBgn0004552 FBtr0073213 1 1 1 80 3L 4141588 4141606 GAATCCCAAGAGCGAAGTC 58 4141650 4141736 GGCGAGAAGGTCAATTGAC 59 NA Drosophila melanogaster 61 CG42245 FBgn0250911 FBtr0290341 2 1 1 60 3L 2632111 2633545 GGCCTCCAAAGAATTAGCC 58 2633567 2633587 GTGTTTGAAGACTATTGGCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 yellow-g2 FBgn0035328 FBtr0072883 1 1 1 130 3L 2277437 2277513 TGGACGCATCTTGGATCTC 60 2277607 2277625 CGAATGTGGAGTTCGTGTC 59 NA Drosophila melanogaster 61 CG12025 FBgn0035285 FBtr0072834 1 1 1 85 3L 1865847 1865865 ATATCCACGCCCATGAGAG 59 1865913 1867155 TACTTGTTGTAGCCCTTGGG 59 NA Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292,FBtr0072774 2 2 2 80 3L 1756529 1756623 CAGATTGGTGAGGAGAACAC 58 1756664 1756684 TCCGTTATTGTTGTGAGTGAC 58 NA Drosophila melanogaster 61 CG12035 FBgn0035263 FBtr0072766 2 1 1 60 3L 1724849 1724870 CCTATCTCCACTTACTATGGGC 59 1724889 1724909 GCTTTGACATTGAAGACATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mwh FBgn0260963 FBtr0072632 1 1 1 80 3L 1230142 1230160 CAGTTTGGCTCCATTACGG 58 1230204 1230275 AAACTCCTGAACGAAGCTG 58 NA Drosophila melanogaster 61 CG17181 FBgn0035144 FBtr0072563 3 1 1 60 3L 585045 585066 AAGAAATACTCCACATCCTCCA 59 584946 585024 CCATGATTGATCTGTGCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG42377 FBgn0259744 FBtr0299980 3 1 1 80 3L 278321 278411 ACAAAGTTAAGACCAAAGACCG 59 278450 278470 TTATGTCCTCTGTGTAGGCAG 59 NA Drosophila melanogaster 61 snoRNA:U3:54Ab FBgn0065047 FBtr0091605 1 1 1 60 2R 13033167 13033187 CTTTCACACTAGCTGAAAGCC 59 13033206 13033227 GCCGAATAGAACGATTCAACTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130 1 1 2 196 2R 20651142 20651160 TTGGTCTCACCGAACTAGC 59 20653243 20653314 GCCAAGAAGGTTTCTGTGG 59 NA Drosophila melanogaster 61 CG13565 FBgn0034935 FBtr0072209 2 1 1 80 2R 19834850 19835146 ATAGTGAGATTGATTTCGGCTG 58 19834791 19834810 GTACTTCGTCTTGAACTCCG 58 NA Drosophila melanogaster 61 Dcp-1 FBgn0010501 FBtr0072062 3 1 1 93 2R 19440346 19440364 CATACACGCCGACTTTCTC 58 19440481 19440499 CAGCGATTGCATGTACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 2 4 4 112 2R 19275104 19275122 CACCTTCGACAACAGAAGC 59 19275257 19275275 TTTAGTCTGTACCTGGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12782 FBgn0034838 FBtr0072048 3 1 1 100 2R 19152595 19152613 GAGAAAGGTGGGACTTCAC 57 19152457 19152531 GGTCCCAGAACCTAATGGA 58 NA Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 3 2 2 67 2R 18299488 18299506 CCGGATAATCCTGAGGCAG 59 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA DesignRelaxed Drosophila melanogaster 61 PpD5 FBgn0005778 FBtr0071806 2 1 1 60 2R 17929423 17929441 CCACTTTGTCATCATCCGT 57 17929381 17929399 ACTATCCGACTCAAAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ns2 FBgn0034243 FBtr0086906 2 1 1 193 2R 13454716 13454734 GCTCGAAGTACATTGAGGA 57 13454483 13454559 TAGATTGATGAGCGCACCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 2 2 2 80 2R 13390401 13390419 ATTCGAAGCAAAGATGGCC 58 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12699 FBgn0046294 FBtr0300762 3 1 1 93 2R 13134730 13134836 TTTCACCTCCAACAGTCCA 58 13134655 13134673 CAGCATCGGATGTAGTGGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Arp53D FBgn0011743 FBtr0087023 1 1 1 60 2R 12661941 12661960 ATAGTAATTCACACCACGCC 58 12661983 12662001 CCAGCCTTACATACTCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30089 FBgn0050089 FBtr0087285 2 1 1 81 2R 11620407 11620425 ACTAACGGCTAATGTTCCC 57 11620470 11622610 GAATGGATCGCAATTCTGC 57 NA Drosophila melanogaster 61 CG33506 FBgn0053506 FBtr0091446 3 1 1 83 2R 10745455 10745473 GGTTTACACCATGGGTCAC 58 10745328 10745346 ATGCTGTAGAGCACAAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13333 FBgn0033855 FBtr0087676 1 1 1 60 2R 9443700 9443718 ACAACTACGACAACCACGA 59 9443742 9443760 TGTTCAGGAGATCAGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dh31-R1 FBgn0052843 FBtr0087755 3 1 1 81 2R 9161471 9162637 TATTTCAAATCCCTGAAGTGCG 59 9161411 9161429 GCCACAACGAGTTATTGGC 59 NA Drosophila melanogaster 61 CG8768 FBgn0033769 FBtr0087871 1 1 1 80 2R 8580019 8580096 CTCTGATAGGTGGTGGCAC 59 8579957 8579975 TCACCGTCACATCGTAACC 59 NA Drosophila melanogaster 61 ana3 FBgn0033718 FBtr0087904 2 1 1 99 2R 8236020 8236099 CAGTTGATGAGCTACTCTCAG 58 8236160 8236178 TTATGTACAAGCAGTCCCG 57 NA Drosophila melanogaster 61 EndoG FBgn0033690 FBtr0088012 2 1 1 60 2R 8065820 8065838 CTTTGGAACTGTTTCGGCT 58 8065778 8065798 CGTCAAGCTTACATTGTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13178 FBgn0033685 FBtr0088019 3 1 1 81 2R 8031692 8031886 ATCGGTCCAGGTTATCCAC 58 8031629 8031649 GTGTTTCGATCCGTTTAGGAG 59 NA Drosophila melanogaster 61 CG34229 FBgn0259832 FBtr0112422 1 1 1 170 2R 7729260 7729361 TGAAGCAGTTTATGCTGCG 59 7729495 7729513 GAAGGAGCATCTTGATGGC 58 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088490 3 1 4 92 2R 5717354 5718801 CAATAACAGAGCGAACGACG 59 5717281 5717299 TGTTGTTGATTGTCTCGGC 58 NA InUTR Drosophila melanogaster 61 CG8216 FBgn0033358 FBtr0088671 3 1 1 98 2R 4851217 4851292 CAGGTGATCAACGGAATGTG 59 4851138 4851156 TACACAGTCGAAGGCATCG 59 NA Drosophila melanogaster 61 CG8235 FBgn0033351 FBtr0088676 3 1 1 65 2R 4815384 4815459 CCATTGAAGCCGAGATTTCC 59 4815338 4815356 TGATCAGCTCCTGCTTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718,FBtr0088720,FBtr0088719 1 3 3 86 2R 4607210 4607228 CTACGGAACCATCAAGGGA 58 4606986 4607161 GCGGTGAGAGTTGTAATAGC 58 NA Drosophila melanogaster 61 CG2906 FBgn0033240 FBtr0113052 1 1 1 80 2R 3844275 3844293 TCTGAAGAACCTGCAAGAG 57 3844336 3844416 CAAGGAAGGGAGTTATCAGG 57 NA Drosophila melanogaster 61 CG30495 FBgn0050495 FBtr0088920 2 1 1 80 2R 3545114 3545132 ACTCCAATGTCTTCTCACG 57 3545174 3545252 GCTCTTTCTTGAAGTTCTCTG 57 NA Drosophila melanogaster 61 CG17985 FBgn0033199 FBtr0088946 2 1 1 112 2R 3539848 3541993 GAATGACGAAGCCAATATGGAG 59 3539757 3539775 CACTCAAAGAGGGTCCAGG 59 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 2 2 2 104 2R 3336438 3336510 CTAAGAAACGCTACGAACAGC 59 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA Drosophila melanogaster 61 CG12828 FBgn0033145 FBtr0112770 1 1 1 80 2R 3036964 3036988 GCTACTTGGAAATAGAATACTGCTC 59 3036852 3036929 CCACTAGGAACAAGTGTTTGTG 59 NA Drosophila melanogaster 61 Opbp FBgn0050443 FBtr0086109 2 1 1 80 2R 2542549 2542569 CATAAACGCTGTGGTAAACGA 59 2542609 2542690 TTATCCACGTCAAACACAACG 59 NA Drosophila melanogaster 61 CG14470 FBgn0033046 FBtr0086049 2 1 1 60 2R 1815081 1815101 ACGAAACAAAGGATGAGTTGG 59 1815123 1815141 CCTTGGGTTATTTGCTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17486 FBgn0032997 FBtr0299924 3 1 1 60 2R 507678 507698 TGCTGGAATCTACTGAAAGTG 58 507720 507738 GTGATGTTAGGTGCTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mir-100 FBgn0064160 FBtr0081064 3 1 1 60 2L 18471438 18471458 TAACAGAAACCCGTAAATCCG 58 18471478 18471498 ATAATGCCGGTCTTGTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33317 FBgn0053317 FBtr0089856 1 1 1 80 2L 20901284 20901342 CTGCTAATTGCCGAGACTG 59 20901384 20901404 GGTAATCTTTGTCGGCTTCTG 59 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 2 2 4 80 2L 19388086 19388105 CGATCCGTATCTATTCCACC 57 19387922 19388045 AGACCAGTTATAGCTTGTTGG 57 NA Drosophila melanogaster 61 CG10561 FBgn0002036 FBtr0081155 1 1 1 93 2L 19114486 19114505 AGCGTTTAGTGCCATTTCTC 59 19114561 19114635 ATTCCAAACTTGGCTCACG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31815 FBgn0051815 FBtr0080870 2 1 1 60 2L 16606183 16606204 AAATACAAGGAGTGTGGATGGA 60 16606221 16606243 CACAGACATACGGATAACAAAGG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 1 5 5 80 2L 14195780 14195801 TAATGTCATACACATGCTCGAC 58 14189222 14195741 TACAGGTTCAAGCTCATTAGC 58 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996,FBtr0080535,FBtr0110941 2 3 3 93 2L 13784583 13784793 TTATACCAGAGCGACTTCGG 59 13784849 13784867 AAGTCAATTGCGAAGCAGC 59 NA Drosophila melanogaster 61 CG6583 FBgn0032420 FBtr0080358 3 1 1 125 2L 12171919 12172130 GAGAGGATTCATCTGGGACG 59 12171813 12171831 CACTCCTCCCAGTACACTC 58 NA Drosophila melanogaster 61 CG6614 FBgn0032369 FBtr0080267 2 1 1 80 2L 11645650 11645671 TTAATATCTGTTTGCCTGCCAG 59 11645536 11645611 GACGATTGAGATGGTACAGTG 58 NA Drosophila melanogaster 61 CG5343 FBgn0032248 FBtr0080044 2 1 1 127 2L 10430371 10430446 AGGTTCAGGTTCTCGATGAC 59 10430263 10430281 GATCTGGTTCCATCCCTCG 59 NA Drosophila melanogaster 61 CG5731 FBgn0032192 FBtr0079959 1 1 1 80 2L 10207544 10207563 AACTCCATCGGATATTTCGG 57 10207420 10207501 TCGTAAAGGTCCTCCACTC 58 NA Drosophila melanogaster 61 Gdi FBgn0004868 FBtr0079862 2 1 1 86 2L 9494281 9494299 GCAGCTACGTTTACAAGGG 58 9493095 9494232 CGAACATACCCATGAGATCG 58 NA Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0079787 3 1 2 91 2L 8955578 8957530 GAAGATACAGAATAAACCCGCA 58 8955508 8955526 ATGATAAGAATGGCCGGCA 59 NA InUTR Drosophila melanogaster 61 Bace FBgn0032049 FBtr0079701 1 1 1 60 2L 8495406 8495425 GCTTACATTACCCTCTCCGA 59 8495365 8495383 TTGAGCAGTCCAGATAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0302595,FBtr0079641 2 2 2 80 2L 8136755 8136775 GGACACAAAGTTCATCTGGAC 59 8136622 8136716 GTGGAATCGTCAAGATTTAGGC 59 NA Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0079532 1 1 2 81 2L 7999160 7999264 CAAACAAGTGAGCTATCTATCGAC 59 7999304 7999322 TTCCTTGATCTCGACCACC 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 1 4 5 80 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682043 7682121 CTGTTCCATCTTGAAGATATGTCC 59 NA Drosophila melanogaster 61 Sfp26Ad FBgn0261055 FBtr0301935 3 1 1 68 2L 5943219 5943243 CAAGTGGTTAGCTATTCTACAACTC 59 5943105 5943123 ATTTCATCAACTTCGGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7371 FBgn0031710 FBtr0079129 1 1 1 80 2L 5522271 5522359 GCATTGGATAAATACTGGGACTC 59 5522213 5522231 GCTCTGGATATTCAAGCGG 58 NA Drosophila melanogaster 61 CG14024 FBgn0031697 FBtr0079082 3 1 1 91 2L 5313320 5313401 AACAATCTCGTCTGGTGCA 59 5313070 5313091 AGATACTTCACATCGTAGCCAG 59 NA Drosophila melanogaster 61 CG3008 FBgn0031643 FBtr0077389 2 1 1 128 2L 4884221 4884240 TGATAACAAAGCACGATCCG 58 4884327 4884400 GGTTAAACACCTTATTGGAGAGC 59 NA Drosophila melanogaster 61 CG15422 FBgn0031579 FBtr0077505 3 1 1 60 2L 4005271 4005291 CACCACCAATGGATACTATCC 58 4005309 4005331 ATACTGGTACTGATACTCGTACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 2 1 1 63 2L 3528913 3529072 ATGCTGGATTTCTGCAAACG 59 3528869 3528887 GGATTCGCATGCTATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 GABPI FBgn0031495 FBtr0077652 2 1 1 81 2L 3030935 3031008 TAGTTTGCACAAGACTTGTCAC 59 3031050 3031068 AGTCTATCCTGGAAGGCGA 59 NA Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230,FBtr0077645,FBtr0077644 2 3 3 82 2L 2996422 2996506 CACCGTAAGCTTAGGTCCC 59 2996552 2996570 GGAGATTGACGTACAGCGA 59 NA Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 2 1 1 81 2L 2870910 2871005 CCATCTATTAAGAAGTTCTTGGGTC 59 2870853 2870871 TTAAAGCAATGGTCTCGCC 58 NA DesignNoJunction Drosophila melanogaster 61 a5 FBgn0011294 FBtr0077922 2 1 1 80 2L 1329253 1329277 GTCAGAAGGATAATGAAGGAAATGG 60 1329310 1329390 GTACTTGATCCTAAGTAACTCCCT 59 NA Drosophila melanogaster 61 Spp FBgn0031260 FBtr0078080 3 1 1 110 2L 544261 544346 ACAAGCTGAAGAAGTCAACG 58 544170 544188 TGAAGAACAGGTACAGCCC 59 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 1 4 4 81 2L 1694370 1694388 ATGTACAAAGGCGAGGTCC 59 1694432 1694556 GACCTTTGACCTGCAAACTC 59 NA Drosophila melanogaster 61 Rad1 FBgn0026778 FBtr0077747 2 1 1 60 2L 2573555 2573573 CCTCCTAGAACTGCATCTG 57 2573513 2573536 GAACTGAATGAATATCTCCTCCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 3 3 3 109 2L 2866729 2866819 TCTGGAAGACCAAGGTTCC 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 3 3 7 117 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962662 2962680 GGAATTCTTCGGAGTGGTG 58 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 1 3 3 91 2L 3017841 3017862 CGGATTATTTATACCACCTGGA 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077565,FBtr0077567,FBtr0302830,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 1 10 10 80 2L 3502696 3502715 CGATTATGTCGCCAATGGAC 59 3502547 3502653 TCATGTTGATGAGGCTGCT 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 1 8 10 80 2L 3500563 3500646 TTGCAACAAGACATTATCACCC 59 3500504 3500525 CAGCAAAGTTCTCTGATACTCC 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 3 4 11 180 2L 3626210 3634251 TATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 2 3 3 83 2L 3722007 3722360 ATGCAGCCAAGACTATTGG 57 3722407 3722425 TATCGGGATGGGTCTTCAG 58 NA Drosophila melanogaster 61 CG3964 FBgn0031574 FBtr0077501,FBtr0077502 3 2 2 81 2L 3865418 3865501 TCCGCATCATCAAGAACAC 58 3865545 3865564 GATCGAATGGTCCTAAACCC 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 3 8 9 86 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878991 3879009 TTCCTGATTAGCATCACCG 57 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 2 5 6 82 2L 4192684 4192705 GAACCTTAAAGACAACAACCAC 58 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 5 5 106 2L 4468742 4468761 GAAGACTGTCGAAGAACGTC 58 4468590 4468673 TACCCAGATGGCAAAGAGG 59 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 2 4 4 84 2L 4845308 4845326 AAACCGACCAAGATTCCTG 57 4845147 4845260 TGATGCCCATTACTTTGCC 58 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 2 2 3 63 2L 4879192 4880393 ACTCGCATACATACAGGAGAG 59 4879149 4879167 TCACGCTGAAGGACTTCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077399,FBtr0077400 1 4 6 80 2L 4912768 4925837 ACAGCCAAACGAAGTAACAG 58 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 1 4 11 86 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 2 3 3 105 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034972 5035074 TCCAATAAGACCTTGACGTCC 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 3 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 3 2 8 95 2L 5068384 5070107 AGAACATACGCACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 2 5 8 93 2L 5069211 5070107 GCGCGTAAGACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 1 2 2 80 2L 5850189 5850207 GTATGGAGCGCTACTTTGC 59 5850250 5850840 CAATGACCATCCTCAGACGA 59 NA Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 1 2 2 83 2L 5993528 5993546 ATCGATCGCCTTAATGCTG 58 5993337 5993483 AGTTCGCACCTTATTGATACC 58 NA Drosophila melanogaster 61 CG13996 FBgn0031763 FBtr0079181 3 1 1 60 2L 6021138 6021156 CGCAACTTTGGTTATCCCG 59 6021229 6021250 TGTGTCCATCAATGTAGTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0300327,FBtr0273250 1 2 4 80 2L 6680518 6680958 CAAGTGCACAGTGATGTGG 59 6680456 6680476 GTCCAAGTTCGTATCTGTTCC 58 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 3 3 3 82 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713837 6714564 CAAACAGTATGCTGTACACGG 59 NA Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336 2 1 2 99 2L 6774876 6775837 ATATCGAACAAGCTGACCC 57 6775967 6775988 TGGTATAATCAATGCTCTCGTC 58 NA Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 1 1 1 73 2L 6960455 6960474 CCAATTCGCTCTATCCTTGC 59 6960569 6960587 ACAATTCGCACCTGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0302162,FBtr0290119 1 2 3 85 2L 6973617 6973639 CGCTCTATGGAACTAAAGAAGAC 59 6973489 6973576 GCTATCACTATCACTCTTCTCCT 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079459 2 1 5 100 2L 7459995 7460013 CAACATTCGGTTGTCTCCA 58 7455745 7459932 GCTAGGTTCTTCAACACCTG 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 1 4 5 80 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682043 7682121 CTGTTCCATCTTGAAGATATGTCC 59 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 2 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688027 7688046 CTTAACAACAGCTTTGAGCA 57 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 1 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 3 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700,FBtr0079699 3 2 3 114 2L 8493050 8493068 CGCTGGCTATAACGAACTG 58 8492790 8492974 GGTTCGTTTGGAATTCTCCAG 59 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 1 3 3 80 2L 8944159 8944242 GACGGATGAGGGACTTGAC 59 8944097 8944118 TCCAGCACATACATTTGATTGG 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 1 2 2 80 2L 8992721 8992741 GGATATCCCACTACACAACTG 58 8992782 8992858 CTGGCATGGAAGGATAAAGG 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301040 3 1 4 188 2L 9135376 9148764 CCCGATATGGTGAGTTGCA 59 9156506 9156525 CAAGTAGTCACGAGTGAGCA 59 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0079842 3 1 3 142 2L 9617485 9617504 GAGGATCTGCCTGATAGGTG 59 9617603 9621162 GCCGGAAATTCATACTATCTAATCC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 1 3 9 81 2L 9905922 9905940 ACGTACCTGGCAATCAGAC 59 9905068 9905880 AGACTGTAGTTTAGCTTGGGAG 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 1 2 2 135 2L 9940471 9940490 TAACCGCAGAACAGACTCTG 59 9940648 9940666 AGTTCCTTTGCATTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079931 2 1 2 117 2L 10009528 10010746 CGCAAGGATGAATACACCG 59 10010825 10010845 TCAGGAATTTGGTCTTCTTCG 58 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 1 3 4 90 2L 10248580 10248600 CGACAGAATGTCCTATTTGCT 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 4 7 80 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256495 10257402 ATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 2 2 2 84 2L 10351770 10351788 AGACCCACTATCCAGATGC 58 10350767 10351722 TGAAACCAAACCTGCACTC 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 1 3 5 80 2L 10990712 10990730 TGTGGACAATAGTCCGGAC 59 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 3 3 5 82 2L 10990776 10991069 AACATACTCTCGGAACGCC 59 10991114 10991133 CCACGGTTGTAGAAGTACGA 59 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 3 2 2 82 2L 11092419 11092440 TTGATGTATGTAATCCTCGCAG 58 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 2 2 2 80 2L 11100218 11100310 CAGGAAATAGAAGTCATCCATTTCC 60 11100162 11100182 GAGGACCTTGGTCTTATTGGA 59 NA Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239 3 1 2 280 2L 11518682 11518701 GCGTCGATTTAAGTACTCCC 58 11518943 11519019 TTTCCGTTACAAAGCGAAGG 59 NA DesignRelaxed Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080391,FBtr0080390,FBtr0080389 2 3 4 81 2L 12407461 12407564 ACTTCCACCATTAAGGTTGTC 58 12407400 12407418 CCTTAAAGACGCTGTTGCT 58 NA Drosophila melanogaster 61 CG5418 FBgn0032436 FBtr0080382 2 1 1 68 2L 12453008 12453026 CGATTATTGGAAAGGCGTG 57 12452856 12452875 CCATGTCCGAGTTACAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 2 2 2 60 2L 12693378 12693396 ACTCCCATCCAAACATGGT 58 12693481 12693501 GCATCATCAAAGGTCATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 2 2 17 92 2L 12736801 12737964 GCAAGTATTCCGGGTTCTG 58 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 1 3 3 81 2L 13171658 13171750 ATACTCAGTCGGTCAAATCG 57 13171596 13171614 TTTAGCTCCAGCTTGATGC 58 NA Drosophila melanogaster 61 RpL24 FBgn0032518 FBtr0080524 3 1 1 232 2L 13394867 13394885 ATGGTCAAGATCGATGGCA 59 13394588 13394606 GGCTTCATGTTACGCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 2 5 5 80 2L 13634168 13634249 GTTCACCTACAGAGATTTCACTG 59 13634289 13634307 CAAATTCCACCAGAGGCTC 58 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886 1 1 5 85 2L 13578247 13609801 AGTTCGCTGTCATGAACGA 59 13609850 13609868 TGTGACTAGCTCGGATGTG 59 NA Drosophila melanogaster 61 Smg5 FBgn0019890 FBtr0080562,FBtr0080561 1 2 2 91 2L 13903705 13903789 TCTTTACAGATCCCTCTACACC 58 13903635 13903653 CGATTTCGTGCTGGAACAG 59 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 3 2 2 80 2L 13986197 13986276 TAAGGCTGTTAGATCTATCGAGC 59 13986139 13986160 GATCGTTCAATTGCTTCAATCC 58 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 2 2 4 97 2L 14639762 14688476 AATGCAATAGGCGAACCTC 58 14636100 14636118 GCTAAAGTCCCAATCTGGC 58 NA Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 2 1 1 60 2L 14871835 14871853 TCATCATTCTCCCACGGAC 59 14871740 14871759 AATAGAAGATTTCGGCCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 1 3 9 174 2L 15261626 15261725 TGGAAATTGAATGCGATACG 57 15261471 15261491 GTCCTAAACGTTGTAGTTGTG 57 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 1 4 5 106 2L 15730831 15737640 CGATTCAAACGAGGACCCT 59 15730743 15730761 CAACCGATGACAGATTGCC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 3 4 5 83 2L 15760332 15760410 GGATTACAGAACCTACACGT 57 15760268 15760286 TTTCTGCCTGGATAGTTGG 57 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 3 3 3 92 2L 16451848 16451867 GATCAAGGATTTGAGTGCCG 59 16451921 16452206 GCATCATAGTACCAGCTGGA 59 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 1 2 2 81 2L 16505876 16505896 ACGATACGAAATCCTATCGCA 59 16505937 16506016 AGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 1 10 16 117 2L 16779838 16780560 ACACAAAGGTGTTCTTCCG 58 16780641 16780659 TTACGGGACAGGTAACCAC 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 1 4 5 93 2L 17437485 17437503 CTTCACCATGCACAACCTG 59 17437315 17437431 CTGATTGTGCAGATGATTTGTG 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 1 4 12 83 2L 17717888 17717910 CCAACGATCTGGAATACTTTGAG 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 3 2 4 177 2L 18475269 18475346 AGAAAGATGAGGTACCATTGCT 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 CG15161 FBgn0032692 FBtr0081078 2 1 1 189 2L 18615745 18615763 CAGTGTTCAAATGGAGCCC 59 18615449 18615469 GTCATCGTGATCAATGATGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 2 3 3 86 2L 19067506 19067579 AAGGACAAGTACGTCATGGA 58 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0302108,FBtr0302107 2 2 6 96 2L 19513106 19513126 CCAACTGAGATCCATGTACCT 59 19512970 19513048 GACAGGATCGGCTATAGCT 58 NA Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 2 2 3 63 2L 19581867 19582015 GCCAAACAATCGACATGGA 58 19581822 19581840 GAAAGCGTGGTGAAAGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0081304 1 1 2 103 2L 19970591 19970609 ACACTCAGTGTCAAGGTCC 59 19970227 19970524 TTGTAGTTGGTGACCTGGG 59 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389 1 1 2 81 2L 20677473 20677575 CTCCACGAACGATAGATCAG 57 20677619 20677637 GGGAGATCTAATTGCTGGG 57 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 1 5 5 80 2L 21617537 21617559 GATAGTAATAGTCGCGAATGCAG 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 Gr22d FBgn0045498 FBtr0077900 3 1 1 70 2L 1789358 1789381 GAGAATATGGACAAGGATCTTGAG 58 1789253 1789272 TTAAATCTACGATGGCTGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269 1 1 2 120 2R 126656 130278 TGATATTGAGGAGCCTCCT 57 126554 126572 AGTAGTTGCCAAATTCCGT 57 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 3 3 3 154 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040328 AGCAGAAATATCTGATCCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 2 4 4 78 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515390 2515408 GTACCAGACTTAGCAGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 1 5 11 135 2R 2764827 2764845 CCGATCAGGCTGAATTTGG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111098 3 2 59 89 2R 3219877 3221902 AAAGTGAAGGTACCTCCCA 57 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111101 3 1 59 91 2R 3219876 3229224 TGAAAGTTAATGTACCTCCCAG 57 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111055 2 1 59 92 2R 3236477 3239436 CAGTGCCCATCATTAGATGG 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111076 1 1 59 85 2R 3248144 3249230 CATCACAGAACCAGTTGGC 59 3248077 3248095 GACTAGAGCCTTCGTCTCC 59 NA Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 2 3 3 80 2R 3490153 3490636 GGATAAAGTGGGTCTTCGC 58 3490091 3490109 ACCGAGAAGACCTTGATCC 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 1 5 6 82 2R 3522439 3522457 TATCCGATGAGGGCTAGGA 59 3522503 3522574 CTAACGCTCTCGAATTGCA 58 NA Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 2 1 1 72 2R 3841407 3841427 CAGCAGTTTAAAGAGTTCCAG 57 3835974 3835993 ACTTTGGGTCTATTTCGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325 2 1 4 163 2R 4381682 4408636 CAGTCGACTTTATTAAAGCGCA 59 4381540 4381558 CTGCAGGATGTGACAAGTG 58 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 2 4 4 119 2R 4642430 4644855 GAACCAAAGACTATCGATATCTCG 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088561 3 1 3 136 2R 4967663 4967744 GAACTGGATCATGAGTTGGAC 58 4967842 4967860 ATCGAGATCCTCACCAGTC 58 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302497 1 1 4 128 2R 5015025 5015043 CTAACGATGCTCAACAGCG 59 5013563 5014937 CTCCTTAACCTTGTCCTTAAGGT 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 1 2 4 88 2R 5013708 5014931 AGGACAAGACTAATCCGGC 59 5013524 5013544 CTTGAATCCCTTATAGGCGGT 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 3 3 10 83 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 1 2 2 80 2R 5290082 5290170 CTATCTGGCGCTCTACCTG 59 5290020 5290040 ATGAACAGGAACTGGAGAAGG 59 NA Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 2 2 2 80 2R 5915137 5915219 AACCTCAAAGTGAGAGCTG 57 5915262 5915281 AATAAACACCTGTTTCCCGA 57 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993882 5993901 TCTGGCCCTTAACTTCTCAG 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438 1 1 4 89 2R 6120801 6120900 CAAGTGAAAGTGCCCAGAG 58 6120730 6120748 GATATACGTTGGACCACCG 57 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0113356 2 1 4 80 2R 6731239 6735974 TATCCATTGTACTCAAGTCTCG 57 6731180 6731201 GTTTCATCTTGAAGGGATTCTG 57 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 2 4 4 272 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394164 TTGAACTCGTGCTTCAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065,FBtr0088066 1 2 2 60 2R 7676065 7676085 ATATAGCGGTAATGGGTTCCT 58 7676025 7676043 TGACCCACATTCCATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 1 4 4 80 2R 7786100 7786120 AGCCATTAACCACAATAAGCC 59 7785971 7786059 CCACTGCTTATCCTGTTGAG 58 NA Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 2 2 2 102 2R 8041068 8041154 TTATCCTCTGGTTAAGCACAC 57 8041218 8041413 GTGCTCGTAGTTCGATGAG 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669 1 2 4 178 2R 8191471 8191489 AAGGAAGTGTCCAAGATGC 57 8191253 8191330 CTCAGCTTGTTGTTTACCTG 57 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087966,FBtr0087964,FBtr0087965 1 3 3 60 2R 8212164 8212187 GTATTCATACTGTTGCTCCTATCG 59 8212057 8212076 ATGCTTTGTTAAGCCGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 3 6 6 93 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335753 ATCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 3 2 8 89 2R 8505630 8505713 TTTCCTGAATACGATGGTCCA 59 8505764 8505782 TTCGGGATCTGGATTGCAG 59 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087787 1 1 3 95 2R 8805401 8805512 GTCACAATTGATTCCCTAAACG 58 8805568 8805586 AAGTAACAAGTCCTGCGTG 58 NA InUTR Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 2 3 3 68 2R 8810273 8810292 TATGCTCTGCAAACGTTCTG 59 8810391 8810409 ATACTTGAACCAACGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699 1 1 2 80 2R 9378989 9379010 AGGCTCAGTTCTCAATTATAGC 58 9378367 9378948 CAATGCCGATCTTGGTGAG 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 1 4 4 110 2R 9717362 9718065 GCATACAAGTGACCACTGC 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100453 3 2 3 67 2R 9842101 9842120 GCAGTGAAGTATTCACACCA 58 9842422 9842440 GAGCAGGAAGAGGAATTCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 1 4 4 83 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 3 2 2 80 2R 10151414 10151434 GGAACGACAGATTACCAACAG 59 10151286 10151372 GGATCAGTGCGTTCAAGTG 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 3 4 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184215 TATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 1 3 6 80 2R 10849117 10849139 CAAGAATATCTCATACGAGGAGC 58 10848998 10849079 TTGATGGTAAATGGCTGATCC 58 NA Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 2 2 2 81 2R 11035857 11035926 TAGATATAGGCTGCGGCTC 58 11035970 11035989 GATTCCAAAGCCAACATGTG 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 1 3 7 91 2R 11545901 11546127 CTCACAAGCCATGTATCCG 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 CG30080 FBgn0050080 FBtr0087319,FBtr0302552,FBtr0302553 1 3 3 80 2R 11589074 11589149 CCTATTCTCAAGCCTGTGGT 59 11589013 11589037 CGTTTAGAGGACCATAATCAAAGAG 59 NA Nonspecific Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 1 4 7 92 2R 11660745 11661328 CCAACAAGGTCGTAATGTAAGG 59 11660674 11660695 GGGTAAGAGTTCCTATACTGCT 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 2 4 7 92 2R 11652754 11660560 ATAATGTGTACCGAGGTGC 57 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0290032,FBtr0290031 1 2 5 85 2R 12216116 12216134 TTGTGGCAGTAGTAGCCAG 59 12214657 12216067 GTAGTTCGGCTGGACTCAG 59 NA Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 2 2 2 88 2R 12229045 12229063 AGGATCTGTACGATGCCAG 59 12228916 12228993 GAAAGTTACGCCATTGGGA 58 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 2 2 2 60 2R 12951498 12951519 ATACATTCTATTCGGACCACCA 59 12951780 12951799 TAGAATGGCCTCCACAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 2 7 9 80 2R 12959277 12959296 GAGATGACAACACCCAAACC 59 12958995 12959238 GACTTGAGCTTGAGTGTTATCAC 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 3 2 3 80 2R 12984774 12984795 CTTATTAGCGAATTGAAGACCC 57 12982548 12984735 CTTTCTCAATGCAATTCCCTC 57 NA InUTR Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 3 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 1 1 1 81 2R 13935657 13935675 TCTGCTTATAGCCCTTGGG 58 13935770 13935790 TCCATCGTCTAAGTAAGAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Muc55B FBgn0034294 FBtr0086809 3 1 1 60 2R 13939179 13939197 GCCTGGAATTCTTCGACTG 58 13938850 13938872 GTGAACATAACCTTGTAGCTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360 3 2 3 153 2R 14320266 14325083 GAGGCCTACAAGTTCCAGG 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299943 2 1 4 84 2R 14645020 14645138 TAGCCCTATTGGTTCACCC 58 14644954 14644972 CAGGACGGATTGAATGCTG 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 2 2 2 112 2R 14697625 14697643 ATTCTTTGCCCTTACGGTG 58 14697465 14697549 CCGACCAATTATACTCGGG 57 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 3 8 12 80 2R 15064179 15064197 TTAGTCACAAGCAGTGCCA 59 15064238 15064456 GAAATGACGTTAGTTCCATGGA 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0301610 1 1 6 80 2R 15425712 15433531 TTATGCTTGAGAGCCAACCA 59 15425651 15425669 TGGTGGTGTGATATTCGGG 59 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 2 3 5 87 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212014 TTGTTTAGGGAGCTAGCCA 58 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100496 3 1 2 81 2R 16439322 16439410 GCAAATAATTTGGGTTCTGTGG 58 16439262 16439283 TCAAGGGATTAAAGTCTCAGCA 59 NA InUTR Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 3 2 2 128 2R 16506813 16506831 CCAAGGGCACTTATCACCT 59 16506923 16506993 TGATGAACAATGAGCGGGA 59 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071525 3 1 3 104 2R 16888630 16888649 CGTCAGGAATCTGTTCAGTC 58 16888716 16890628 GATGTGCTGCTACTGTTCG 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071851 3 1 4 178 2R 18195750 18198596 AGTGTACTATCTGGCCAGAG 58 18188393 18188412 CAACCACAATGAGGAACAGG 59 NA InUTR Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0113107 1 1 4 80 2R 18226350 18226370 CCCTCGAAGAACATAATACGG 58 18225402 18226311 ACAGTAAATAAGGTATCGTGCG 58 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 2 3 4 81 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222370 18222450 CTTTAGACAGGGAGCTCTGAG 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 3 3 4 83 2R 18223212 18223230 CAGCACTATGCCACAACAG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 3 2 2 121 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357182 18357200 TTGATGGTAGGGCTATGCG 59 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 1 4 4 119 2R 18693536 18693554 AAATTGACGGTTCCTTCCA 57 18693371 18693454 ATCCTTGGAGTCTTTCTGTG 57 NA Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110 3 1 2 175 2R 18696297 18696317 CAATTGGATCTAATCGGCACC 59 18696453 18698950 GTTCTTGTCCAGCTCAATGC 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 2 2 4 80 2R 19797347 19799208 TCGTACGATGACTCAGGTG 58 19799247 19799270 GTCGTACAGATATAGATTTGGGTC 58 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 3 3 3 143 2R 19948088 19948209 GTTAAATTGGTGTACCTGCGT 59 19948377 19948395 CTTCAGACCCTTCCAGTCG 59 NA Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 3 2 2 88 2R 20017595 20017613 TAGCCTTCGAGACCATCAG 58 20017460 20017544 TCCCGAATAGGTCTTGAGAG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 1 7 8 116 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878692 20878710 CATCCTGGACCGATGAGTC 59 NA Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 3 4 4 178 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979237 20981813 AGACCAAACATATGTGGCG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 1 9 9 80 3L 143207 143522 TTGTCCATACGCCAAATCG 58 143565 143584 TGTTCTCAATAGCTTCCGAC 57 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 1 3 3 80 3L 185060 185138 ACATCTTTCAGTACGCTGG 57 185180 185200 CCACCAATTTAGGAGCTAGAC 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 1 5 6 81 3L 352342 352363 TATCTCGAGTTATCCGAAAGGG 59 352405 352491 GAGCATCAACCCATCTCAC 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 1 2 6 97 3L 1024533 1024551 CTAAGTTTGCCGTGTGGAC 59 1024396 1024474 CTTAACCCAAATCTGCTTGGT 58 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 1 2 2 94 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341782 1341800 ACCTTCTCGATTAGTGCCG 59 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 2 2 2 145 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341731 1341749 ACCTTAGTCTTCTTGGCGG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 2 3 3 102 3L 1621164 1621183 TTGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858 2 1 4 96 3L 2127143 2127161 ATTTACTTCACGGCGAAGC 58 2126658 2127083 TGTACTTGTAGCCCTTCGC 59 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 1 2 2 105 3L 2154400 2154489 GAAGCATTGAGGATTGGCA 58 2154313 2154332 GCTGTTTGAAAGGATGAGGA 58 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072964 1 1 4 80 3L 2503193 2503213 GGAACAAATGGAACCAATGGA 59 2500453 2503153 ATAGGGATACGTGGGATTCTC 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 2 2 5 148 3L 2558030 2560128 ATCCAGTGAGGAGAAGCAG 58 2557900 2557919 TATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 2 2 2 94 3L 2600875 2600893 AACTCGCAAGAAGGGACTC 59 2600949 2601030 CGATCTTGACCTTCTGTAGGT 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 2 2 4 85 3L 2941549 2941572 GTCTCCTTCCATCATATCAATCTG 59 2941616 2942575 GTTTGCTTTCCTGTGTCGA 58 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 1 2 6 84 3L 4129782 4130399 GTATCGTAAGGAAGATAGCGT 57 4129718 4129736 TATTGTCGGCATAAGGTCC 57 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091477 2 1 4 156 3L 5921000 5921336 TTAGTTACGTCACCTTTGTCG 58 5921694 5921712 GACTTGATGGTCATCGTGG 58 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091475 3 1 4 150 3L 5918408 5918504 GCTGGGTACTAAATGCTGC 59 5918618 5918636 TCGTAGTTATCCTCGCCAC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 6 6 91 3L 6584022 6584040 GTGAATCCTCCCAAACGTG 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 2 2 2 84 3L 6734856 6734876 TGGGAGATACCGTGTATTTCG 59 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 2 6 11 81 3L 7005317 7005336 GCATTGGCAATGATTTGCAC 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690 1 1 2 87 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324324 7324407 TTGGAAACAGTCTTCGTCG 58 NA Nonspecific Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 2 4 5 228 3L 7361074 7361998 AATAAGGAGGTGAAGAAGCG 57 7360865 7360883 CAAAGGCGTCGTAATCACC 59 NA DesignRelaxed Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 1 5 5 130 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 3 2 2 80 3L 7755269 7755287 GTGGACAACTGTGGATTCC 58 7755331 7755407 GAAACCTGTGCAATCCCTC 58 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0076785 1 2 3 198 3L 7761741 7761818 ATCATAATGAGGCCACCGA 58 7760182 7761579 AAATCTTGCGGCAGATAGC 58 NA Drosophila melanogaster 61 ERR FBgn0035849 FBtr0076724,FBtr0076725 3 2 2 76 3L 8177588 8177607 TGTCTACTAATGGGCATGCT 58 8177475 8177493 TTCCTTCGGTACTTCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076669,FBtr0076670 2 2 9 216 3L 8351828 8351847 TGGTGACAAACACTATCGTC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 3 2 4 80 3L 8463409 8463432 CAAATATGCTTATACCTAGGGAGC 59 8463467 8463540 CCTGTAAATACTGTAGTTGGTCG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156,FBtr0301158,FBtr0089561,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089568 3 7 13 86 3L 8620818 8627689 CATTGTGAATCAGCCCTACC 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273286 1 1 7 104 3L 8899431 8899449 AGCTGAGCATCGAAGTCTG 59 8899229 8899363 GGCCAGAGGATGTGTAAGG 59 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 2 3 3 80 3L 8977955 8977975 TCAACTCAGAAATCTCGAGGA 58 8977750 8977915 CTCTTTGGAAGCTCGATTCTG 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534 1 1 3 80 3L 9148400 9151050 CTTACCACAGGCAACTATTCG 59 9148340 9148364 GTAGATTTGTATAAGGTAGTAGCCC 58 NA Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 2 1 1 61 3L 9207529 9207547 ATCTTTGAGCTCATTGCCG 58 9207703 9207721 TCAGCATCTTGGCAGAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 1 1 1 90 3L 9347870 9347888 GATTATGGTTGCTCAGGCG 59 9348003 9348021 ATACAGGGATTCCGTAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 2 2 2 125 3L 9405082 9406320 GCACTATTTGCTGTACCCA 57 9406408 9406500 AAAGTTGAATCTGCAGAGGG 58 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 1 2 2 80 3L 9452145 9452166 ACTGTGTAAACAAGGATTTGGC 59 9452207 9452291 TATCAGCATCTGGCAAGGG 59 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076428,FBtr0076427 3 2 2 86 3L 9490275 9490293 AAAGTCGGATACCGAGCAG 59 9490140 9490227 TCATTATCGGTTGTTGGATGC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 3 12 12 88 3L 9773788 9773875 TCCTCATGAGATCTTTGTGC 57 9773926 9773944 CATACTTGATCCAACGGGC 58 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 2 2 2 60 3L 9886555 9886626 GCGATACAAGAAATGGCGT 59 9886513 9886533 TGCCAAGTTATTTAGGACCTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 3 4 4 100 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600359 11600377 GCATTGTAGTGTGATCCGC 59 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 2 3 3 91 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730946 11730964 GGTCACGTACTTCAGTGTC 57 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 2 3 5 134 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005707 12005726 TGATTGCTCACGTTCTTCCT 59 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075998 3 1 2 87 3L 12145045 12145066 GAGTACATTGTCCAATATTCGG 57 12145114 12145292 AGTTGCCCTTGAACATCTG 58 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 2 2 2 64 3L 12193846 12193864 TCAAGCAGAACACCAATGC 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 eyg FBgn0000625 FBtr0100170,FBtr0075979 1 2 2 101 3L 12458260 12458958 TCTCCAAGTTGCTAGGCTC 59 12458177 12458197 GCTTGTACTGTTCGATCTTGG 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 1 3 3 103 3L 12843424 12843610 GGAGAGTACATACTGCTCCAC 59 12843673 12843693 GAGGTGAGATAAATCCTGCCA 59 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290127 2 2 4 152 3L 13876429 13879191 CGTGATTTGCCGGAATACG 59 13867040 13867058 TTTATCGCCCAGCAATGTG 58 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 3 2 2 89 3L 13975946 13976216 TCCAGCGATACAGGAATACC 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299650 3 1 3 88 3L 14729228 14737303 GCGATCAGAATCTAATGCATACC 59 14737351 14737369 TAGAGCAACCGCTATGACC 59 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075566 2 1 2 123 3L 15576972 15577395 ATCATCATGCGACGATACG 58 15577481 15577500 GAAAGTCTTGCCACAAACAC 58 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 1 2 3 80 3L 15580157 15580175 ATGAGCCGAACACATTCTC 57 15579691 15580113 TGTCCTTACCCTGTGAGTC 58 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 1 4 4 88 3L 15964323 15964401 CATTCTAGGTCGAGGCTCC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301472 3 1 7 108 3L 16059405 16059725 CTTCTTCAAATCCTTTGTGCCA 59 16059794 16059812 GGTGACACCTTGGGTAGAC 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 2 4 4 66 3L 16346789 16346807 CATCATCAACTTCACCCGG 58 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 3 2 2 80 3L 16557863 16557886 GAGTACTACAAGTTTCATCAGTCG 59 16557736 16557826 GGTGTAAAGGAAACCCAATCG 59 NA Drosophila melanogaster 61 CG9705 FBgn0036661 FBtr0075325,FBtr0075324 1 2 2 82 3L 16774678 16774774 GTTTCCGACATCGAAGGTG 59 16774820 16774838 TCATACTTGGGCGGAATGG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 2 3 12 162 3L 16895015 16895037 GGAGGAAATCGAACTAGAAAGAC 59 16895158 16895237 TTCTTTGTCCAACTGCTCCT 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 3 2 4 81 3L 17061138 17061156 GATCTAACCAATGGGCAGC 58 17060461 17061097 CCTGATAGTTGTTCATCACTGAC 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 1 3 7 80 3L 17535994 17536012 GATGTGGATCATCGTCAGC 58 17536056 17536616 GGTGTCTTCATTCGATGGC 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151,FBtr0075148,FBtr0075150,FBtr0075149 3 4 4 110 3L 17948397 17948415 GATGGATATCGTTGGCTCG 58 17948140 17948324 TTGAGTATTCCGATCTGCTG 57 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242,FBtr0089387 2 2 2 93 3L 18480882 18480900 CAGGAAACTTCACACCGTG 59 18480594 18480825 ACTTATGACCGTGAGCACC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075010 1 1 12 80 3L 19294962 19295043 GAGTGTCTACCCTTCGACTC 59 19294901 19294922 AGTTCCTACAACTGCATAATCG 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 3 3 6 116 3L 19685465 19686090 GTGTACAGATGTACCAAGTCG 58 19685369 19685387 TTTCTCGTCGCAATTGGTC 58 NA Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 2 1 1 91 3L 19910148 19910166 CACTACGAGACGTCCAGTG 59 19910288 19910308 TCCTTCTCTTTCTCCTTCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302713,FBtr0302716 1 3 5 80 3L 20149092 20151591 CAGGCCAATGTGGTATCCA 59 20149030 20149049 GAACTCCTCATCTGGTTGCT 59 NA Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 3 2 2 80 3L 20237608 20237627 GAGTTTGTCTGGAACTCGAC 58 20237666 20238048 GATATGCCCACCTGTATAATGAG 58 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 2 3 3 80 3L 20426897 20426918 GGTGTTCATTAAATACCTGCCT 58 20426958 20427049 AGGACAGCAATAAGATCCCA 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 2 3 3 62 3L 21266054 21266072 CAATGGAGCCACTTCAGTG 58 21265937 21265955 CAGTACCGATCGTTTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 2 3 3 120 3L 21719351 21719369 AATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 Chro FBgn0044324 FBtr0078570,FBtr0078568,FBtr0078569 2 3 3 143 3L 22870965 22871045 TTATAAGAGCTGCACAGGAG 57 22870841 22870860 GCGATTCCTTCAAATTTGCA 58 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 1 3 4 80 3R 162125 162203 GGCCCAGACTAGTATCCAG 58 162063 162086 CTCAGGTCAAGATATTGTAATCGG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 6 10 105 3R 569891 570196 CGATATGGATACTCAACTGAAATCC 59 569810 569830 CTCTAACTCCGATCGATCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 3 12 19 135 3R 1119084 1119798 GAAAGTATTCTCAAGACGTTCCTC 59 1118972 1118990 GTCCATGGAGACCATGGAG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 3 4 19 134 3R 1129895 1138720 TCAAGAACAGGTCACGTAGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 Prosbeta7 FBgn0250746 FBtr0078805,FBtr0078806 1 2 2 131 3R 1183002 1183091 GAAGCTTCCGAACTGATCC 58 1182889 1182907 TTCGTTAACTTGGAAGGGC 58 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0078685,FBtr0113409,FBtr0078684 3 3 3 123 3R 1314882 1314900 GGAAACCAAGGACTTGGTG 58 1314984 1315098 GTGGATTGTTCAAAGGATTTGG 58 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0089685,FBtr0089686 1 2 4 82 3R 1402908 1402926 ATCTACGCCATCACCAGTC 59 1402971 1403323 AAATCGTCATAAGCCAGGGA 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 3 4 4 91 3R 2184950 2184968 TGTCCTCAGCATTTCAGGA 58 2185021 2185112 GAAGGGATGCTTTAGCAAGTC 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081672 2 2 3 80 3R 2308892 2315363 CGATACTGAATTGGACAGAAAGTC 59 2315399 2315420 TTAATATTAATGGTGCGCAGCC 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081600,FBtr0081601 1 2 3 105 3R 3044111 3044315 CCTGCTGATTTCTTTAACAAGG 58 3044027 3044046 ACGAATAGTTGAAGATGGCA 57 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 3 2 4 180 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118149 3120141 CCAGAAAGTGACCTTTCTGC 59 NA Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0081784 1 1 2 124 3R 3830477 3830495 TGTATTGGATCGGTTGGCA 59 3830583 3830991 CTCGTCCGTACTGTTCCTG 59 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 3 2 2 85 3R 3833666 3833686 GTCAACACCAAGTTCTTAACG 57 3833218 3833620 ATTTCCTCATCAGATGCCTG 57 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 2 2 4 80 3R 3848385 3848408 CATGGTGATGATTCGATCATACTG 59 3848200 3848346 ATTGGGCTCCATCTGATCC 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 3 2 4 131 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607990 4608008 TTTGCTTTGGAGACTCACC 58 NA Drosophila melanogaster 61 CG8379 FBgn0037638 FBtr0081922 3 1 2 82 3R 4650603 4650683 TTGACACGGAAGATCATCC 57 4650728 4650747 GGACTTCTTAAAGATCCCGT 57 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 3 3 3 102 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830325 TTTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 1 2 5 98 3R 4858901 4858919 AAGAAGCGCTTTGGATTGG 59 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091943,FBtr0091942 3 2 4 110 3R 5180479 5180498 TGGAACGTGAATCTAACCCA 59 5180568 5180659 TTCTAAGCGAGTCCTTATAGCA 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 2 2 14 96 3R 5262829 5269739 AGCAAAGCTTCTGTGAGTC 58 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207 2 2 4 80 3R 5348545 5348565 CTGGCACGAATAATCTTACCA 58 5348605 5349269 GTTGTGTCTGATCTTGATTGC 57 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 2 5 9 80 3R 5834565 5835033 CTACGAAGGTTCAAACCGAG 58 5834504 5834523 AGTCGGTGGATATCTCAGTG 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 2 3 7 104 3R 6692327 6692345 GGAGACCAAGTACGACTCG 59 6689538 6692261 CGTATACGTTCTGGTATGCTG 58 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 1 3 3 81 3R 7936166 7936184 CTGGTTGGTATACGCAGCT 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 3 2 2 100 3R 8210528 8210937 ACTCACGGACTACTATTTCCC 59 8210999 8211017 AGATTGTGTTTAGCCAGCC 58 NA Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100525 2 1 2 77 3R 8221479 8221497 TCCTGGTTAGAACCAAGCG 59 8221296 8221440 GAACTTCAAACACCTGATCCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Men FBgn0002719 FBtr0082661 2 1 2 86 3R 8546368 8546386 GTACTCGATCCTACGACGC 59 8545711 8545729 GGACTCTGCGAATTGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 135 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082856,FBtr0082855 3 3 4 108 3R 9468919 9471482 GACGACAGGAAACTGTTTGTC 59 9468766 9468787 CTGTCTTGACATTGATGCTCTC 59 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 1 3 3 97 3R 9485362 9486071 TGGTGAAGAGATCACCGAG 58 9485283 9485301 TCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632 2 1 5 132 3R 9796819 9797002 TACAAGAGCCAAGATTGCC 57 9796705 9796724 GTATTAACTTCCGGCAAGGG 58 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 2 2 3 144 3R 10116535 10124524 ATTCGCAGTTTCAAGAGATCG 59 10124629 10124648 ATGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921 3 2 3 146 3R 10116532 10124520 TGCATTCGCAGTTTCAAGAG 59 10124629 10124647 TGAGGGTCTCATTGTTCCG 59 NA Drosophila melanogaster 61 CG14853 FBgn0038246 FBtr0082960,FBtr0082961 2 2 2 93 3R 10441512 10441591 TGTCAAACCTCCTCTACATGG 59 10441644 10441664 CCATTATCGTTGTCCATGTGG 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 1 2 2 80 3R 11040072 11040153 TAGACAACGATACTGATCAGGC 59 11040194 11040212 CGAAGAAGTACCGTCCCTG 59 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 2 2 2 72 3R 11183940 11183960 GGGATTCTAGAGAATCTGCAG 57 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083244 1 1 3 80 3R 11742330 11743288 GGCGATCGAGAAATTTCCC 59 11742268 11742290 CGTAGTTGGTGTAATCCATAGTC 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233 2 1 6 80 3R 11900191 11900211 GCCACCATTAGTCTTACAACC 59 11899116 11900151 CTCGGATAGCTCATCATCCTC 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233,FBtr0083229 3 2 6 165 3R 11895717 11895736 GGCTCTATCAGTGATCTGGA 58 11894323 11895589 ACTTGGCGTTATTTCTCGG 58 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 2 2 2 60 3R 12260765 12260788 GTCGATGAGTATTATACGACAACC 59 12260866 12260885 CCAAATTAGCAGTCACCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 2 1 1 71 3R 12309015 12309033 ATCCTACACTGTCCAACGG 59 12308906 12308924 TGTGCTCATTGAAGAGACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 1 2 2 60 3R 12576950 12576971 ATTCACCAGAATGGAACAATCG 59 12576911 12576933 CCACATACCCAATAGTATGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 3 3 3 115 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204583 14204602 CTCGGTCTTCACAATGTCAG 58 NA Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 1 2 2 86 3R 14967735 14967822 ATACAAGCACAAGCTGGTC 58 14967667 14967685 AGCTCGTAGGAATCTGTGG 58 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 1 3 3 86 3R 15478732 15478750 GAGAATCGGAGGCCTATCC 59 15478581 15478682 TGGTGTAGCTCTTGTACGC 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 1 3 3 80 3R 15676019 15676037 GTTTCGCAACCTAAGGGAC 58 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 1 8 8 80 3R 16148795 16148813 ACACTAACTCGGACTCCAG 58 16148855 16148947 CCAAAGCAAGTTGCTTAATGG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 1 2 8 80 3R 16146585 16147205 TGAACGTGAAGGATTTGGAC 58 16147248 16147266 ATTCGGATTCCGACTCCAG 59 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 3 4 4 127 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450606 16450774 GGTGGAGAAACTTTGTGCG 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 2 3 3 82 3R 16562578 16562596 CCAAGTTCCCTAGATGGGA 58 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 1 4 6 89 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615474 17616441 CACGAATATAAGCACCGGAG 58 NA Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 2 2 2 61 3R 17845755 17845839 CTAAACAGGGCCAGGTACC 59 17845712 17845730 TTCATGTACTTGAGCGCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 3 3 3 102 3R 18217014 18217094 CATTGAGTGAATTCGGCGT 58 18217156 18217178 CTGCTCAATACGGATGAATAGAC 59 NA Drosophila melanogaster 61 Nrx-1 FBgn0038975 FBtr0301485 2 1 2 185 3R 18299470 18303810 GGGTATGTTATCCGAAACGA 57 18304016 18304036 CCCAGACTCTTGACAATATCC 58 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 2 3 3 117 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380652 TCTTCATGTACTCGGGTCC 58 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0084300 2 1 2 109 3R 18500551 18501677 AACAGCCGTAGATGCTACC 59 18501749 18501768 GATTTCTGGCGAACGAAGAC 59 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 2 4 4 80 3R 18614228 18614310 ATAGTTTCTATGCGGATCCCAG 59 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA InUTR Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368 2 2 3 85 3R 18946200 18946218 TGTGGGATCTACAACAGCA 58 18946267 18946347 GTTCATCTCCTGGAAGCAG 57 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088 1 1 2 170 3R 19076468 19076489 CGGTCATCGTTAAATAGGTCAG 59 19076254 19076338 ATTGTTCTGAATGCTTGGCA 58 NA Drosophila melanogaster 61 nau FBgn0002922 FBtr0301445 2 1 2 96 3R 19542085 19542103 CTGCCAGTCCGATTATCTG 57 19538851 19538940 GCCATCAAAGTCATATTTCTCC 57 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273215 3 1 2 80 3R 19674617 19674692 CTATTCCAACAGGAGGTGGT 59 19674732 19674753 CCTCGAAGGTATCAATTTCTGC 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0300963 3 1 5 91 3R 19803254 19803272 ATTGGAGCTGATCTCCAGC 59 19803324 19803405 ATACATACAAACCAGGCAAAGG 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 1 4 6 91 3R 20079842 20080372 CCAAACAAATTGATCAGATCCG 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 3 2 2 107 3R 20196248 20196328 TGTGTTTACACTACCAACCG 58 20196398 20196416 TTTAGCTTACACGAGTCGC 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 3 3 18 82 3R 20521108 20521126 GACGCTGATCAAGAAATGC 57 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 3 1 1 81 3R 20544868 20544886 TTCTGGAAGGAGCACAAGG 59 20544736 20544755 ATGGATTGTAGGCTCCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084732 3 1 2 81 3R 20682616 20682691 ATAAGGAACCTTGAGGATCCG 59 20682555 20682577 CCAACTTAGTTATGCTGGATACC 59 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 1 2 2 160 3R 21053857 21056363 TTAATAAAGCTACTCTGGGCG 58 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 3 5 6 88 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180028 21181956 GTGATTTGTGCCATATAGCGA 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100 3 4 10 194 3R 22402353 22404451 TTATCAGTGAGGAGGTTGTG 57 22404876 22404896 CCTCGTTGACTTTCAATATGC 57 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100334,FBtr0085092 1 3 9 94 3R 22699710 22699800 CAGCTACCCATATACGGGC 59 22699634 22699652 CATTGGATACGCCAACAGC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 3 4 9 162 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699586 22699604 TCTAGCGGCGATATTTGCT 59 NA Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 3 2 2 122 3R 22702878 22703271 CACTACAGAAACTTTGTCGTGG 59 22702777 22702796 ATAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0114372 2 1 12 102 3R 22892467 22892485 ATCACAGCCTGATCCAACC 59 22892166 22892340 CGATACTTGGTATCCGATGGA 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0114372 3 1 12 103 3R 22892467 22892486 TATCACAGCCTGATCCAACC 59 22892166 22892340 CGATACTTGGTATCCGATGGA 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0112834 1 1 12 80 3R 22892914 22893092 TAATCACTTACAGTACGAGGC 57 22892854 22892872 ACAACTCCCTCATCATTGG 57 NA Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 3 2 2 86 3R 23068900 23068982 TTCTATAAGACCGAGTACGGG 58 23068834 23068852 CATGAAGTTGTCCACGCTG 59 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 2 5 5 127 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529568 23529643 TAATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 3 2 3 132 3R 24027913 24027931 GATCTGAGTGCCGAAATCG 58 24052504 24060800 CCTCCGCTTTCTTAAAGCC 58 NA Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 3 2 2 187 3R 25547146 25547374 AATGAGAGGCTCCCTTACC 58 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0301073 3 1 2 83 3R 25696797 25696816 TTTCACGAACTACGTCAGTG 58 25696859 25696969 TGAGCTATTCTGAGAATCAGGT 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 1 6 12 139 3R 26359221 26397540 ATCACTGAGACTTCTGCCA 58 26397642 26397661 AGTATGGTTATCTCCTCGGG 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085658,FBtr0113483 3 6 12 140 3R 26359222 26397541 TCACTGAGACTTCTGCCAC 59 26397643 26397663 CCAGTATGGTTATCTCCTCGG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 1 4 13 196 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 2 4 4 108 3R 27230212 27230232 CCTCAAATGCCTAAGTTTGTC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 2 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 2 3 3 80 3R 27661189 27661274 CACTGAGAAATACGGAAAGCA 58 27661315 27661334 TAAGACCCATGTTCCGATCG 59 NA Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084059,FBtr0084058 2 2 3 60 3R 17123343 17123362 TAACTGGTGTTTATCAGCGG 58 17123385 17123403 TCAATAGAAGCGACAGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 3 4 7 81 4 261387 261410 TCTAAGGGTCAGTCTATGTATGTC 59 261448 263095 CATCATTCCCTTGAGATCCAC 58 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 1 2 4 94 4 585203 585221 CAAATCGCTTTACCGGCTC 59 585275 586044 CCTTTAAACCCTCCATCATTAGC 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 3 4 6 109 4 640793 640889 ATGCTCAACAGATATCCAGGT 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200 1 1 3 89 X 31138 33030 AATTCGCAAGGTTTGTGGA 58 33080 33101 CATTCCACGTAGATAGTCTCAC 58 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 1 4 8 80 X 165641 166468 TCAGCGATGTTGATTACACC 58 165580 165599 TTGGGTCTACCTGGATTAGC 58 NA Drosophila melanogaster 61 vnd FBgn0003986 FBtr0070110 1 1 2 156 X 485842 485860 CTTATGCTTCCATCGTCGG 58 485980 487694 TTGCATCGAATAAGCCAGG 58 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 2 2 4 88 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516382 516488 AAGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 1 2 2 84 X 1265799 1265960 GACTTCAAGACCGGATATAGCT 59 1266005 1266023 TTAGCTTCTGGATGGCGTC 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0302028 1 1 4 80 X 1643845 1643958 CTGGATACTCAAGGAGGGC 59 1643783 1643803 TCCATAATTATCGCTTGTCCG 58 NA Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 1 2 2 80 X 1754142 1754160 CCTTAACACCGATGTGGGT 59 1754006 1754098 CAGCAGTTAATGGTCAGCG 59 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362 2 1 2 85 X 1783449 1783467 TCAGCAGATCATAGTGTGC 57 1783319 1783400 TGGTAAAGGTCTGCTTGTC 57 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 1 4 5 87 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786139 1787446 TAGAGTATCATATCCTTGCTGATGG 59 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070318,FBtr0070320 3 2 3 94 X 1822529 1822547 CCTCTATCCGACGGATGAG 58 1822600 1823043 GAATATCAATCTGGTCCATGTCAC 59 NA Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 3 2 2 81 X 1985852 1985870 TTGACCACAGTCATTCCGT 59 1985912 1986003 CCTTGAGAATCTTGATCAGGAC 58 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 3 2 2 157 X 2014215 2014233 CTTGGTTCTGGCAGAATGC 59 2014015 2014097 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091962 2 2 8 174 X 2380226 2380248 CCCAGATATGTGATTTAAGCAGG 59 2378777 2380092 GTTGGATCGTTGGTGTCTC 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301058 3 1 4 184 X 2817394 2817719 TCGGATTCTTCGGACTTCG 59 2817867 2817885 GCTATCGTCATTGTCAGGC 58 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 1 2 3 80 X 3408481 3409291 GTGGAAACTTGGTGTCGAG 58 3409335 3409353 CTTTAGGCAGAAGTGCCAG 58 NA InUTR Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070706,FBtr0070707,FBtr0070705,FBtr0070704 3 4 4 185 X 4585719 4585738 CAGTGAAGTTGTAAGCACAC 57 4592338 4592356 CTCCTTCTTGATGTAGGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 2 4 4 91 X 4619145 4619164 CCAGCACTATGACTATCCCA 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 1 2 2 145 X 5512503 5512607 AGCCGGAATTGTACAAACTG 58 5512377 5512395 GTACTCGGAGCCGTATAGC 59 NA Drosophila melanogaster 61 Ca-alpha1T FBgn0029846 FBtr0089393 3 1 2 89 X 6014330 6014348 TGCGAGAAAGTTAACGGAG 57 6009597 6014278 CGTCAGTATCTGGAACACTG 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 2 5 6 106 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 3 2 2 277 X 8375952 8375971 GAGATCGACCTACATTTGGG 57 8376437 8376455 GAATGTTCTGGTCGGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 3 2 3 103 X 8381363 8381382 GAAACGGAGATGTACACGTG 59 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 3 4 5 80 X 8404727 8406393 CAATGGAAACGATCCCGAC 59 8406434 8406455 GTCGTGATGATTGAGCTTAGTG 59 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 2 4 5 80 X 8404724 8406391 TTTCAATGGAAACGATCCCG 59 8406430 8406452 GTGATGATTGAGCTTAGTGAACC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 3 4 6 89 X 8478535 8478553 ATACTCGGAGATCCAGTCG 58 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 2 2 2 131 X 8762244 8763251 GAGCTGGAGACCAGATTGG 59 8763346 8763364 CAGTTGGTGATGATGGTGC 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 3 4 6 117 X 9005030 9005126 CGAGCATGGATTTAATCCAGC 59 9005448 9005466 AATCTGTCGGATGAGGTCG 59 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 1 3 3 105 X 9048443 9048461 TTTCAAGACCGATCTGCGT 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 3 2 3 88 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859798 9859884 GGCTCAATGTCTAGGAATCGA 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 3 2 3 88 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859798 9859884 GGCTCAATGTCTAGGAATCGA 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584 1 1 4 80 X 10120673 10121385 CATATCCGGGAAACAGACAC 58 10121428 10121446 CTCTAGAGCGTCTGAGGAG 58 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 3 4 4 80 X 10655531 10655622 GTATCCCGATGATATTATCTGTCC 58 10655474 10655492 CGCACCTTGGACATAATGG 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 2 2 2 88 X 10806370 10806551 CACATACACAGTCCCAAATACC 59 10806600 10806618 AGACTGCTGTCCTTGTAGC 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 2 3 4 97 X 11049247 11055098 AAAGGAGAACCTATGGTCGG 59 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0073522 3 3 4 173 X 11567487 11567775 CTATGAAGGCCAACAAGTGC 59 11567909 11567929 TGGTGTCCAGTAAAGCTACTG 59 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 1 2 3 80 X 11592562 11592580 CTAGTCGTTGATCCTTCGC 58 11592623 11594665 ACCCATTAACACCATTTGGT 57 NA Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073669 1 1 2 116 X 12355849 12355868 CTAAAGGTTCTACTGGTGGG 57 12355696 12355771 GATATGAGATGTGCAGTCGT 57 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073660 2 1 5 95 X 12483941 12483959 GTCGAGATACCCAAGGACG 59 12483345 12483884 ACAGAACAAGTCTGTAATGCG 59 NA Drosophila melanogaster 61 Pde9 FBgn0259171 FBtr0299635,FBtr0300517 1 2 2 80 X 12706249 12706268 GTCTACAAGCACTACAACGA 57 12701247 12706208 CGTTATGGCATACATCATCTG 57 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301922 1 1 10 103 X 13493481 13494111 AGAGTACACCTCCGAGGAG 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073813 1 2 4 80 X 13591263 13600186 CGACTATGTGAATGGCTTCC 58 13600227 13600247 TTCTCATCCGTATTCACAACC 58 NA Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 3 2 2 155 X 13890546 13892135 GCTGTTACGATCTCAACGA 57 13892254 13892272 GAATGGCATTGATCCCAGG 58 NA InUTR Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 3 2 4 125 X 14726982 14727183 GTAATCCGAACGACAGCAG 58 14727269 14727290 CCATTATTTAGTCGGTGGTACG 59 NA InUTR Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 2 2 2 84 X 15651251 15651354 TATCTATACGACGTTCGAGCA 58 15651397 15651418 CTGAACTTCTTTAGCATGAGGG 59 NA Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074089 1 1 2 80 X 15650535 15650614 TTGCAACCTAAGCTTTGCT 58 15650657 15650676 CGTTGGATCTTCCTTCAGTG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 2 5 9 133 X 15714507 15714525 GAACCAGGAAGCAAGTCAG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 1 5 5 80 X 15749869 15749890 CTATAATCGCGTTGGAATGGAG 59 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074109 1 1 6 89 X 15754281 15754303 CGTGTAAGTAACGTATTGTCGTC 59 15754346 15755199 GTGTATTTCAGACCTCATAGATCAG 59 NA InUTR Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 2 2 2 94 X 15821906 15821990 CAGGCAAGATCGGAAAGAG 58 15822045 15822066 AGATGGTATAGGACTCATTCGA 58 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 2 5 5 83 X 16178783 16179061 CGACTACGTAGGCTATGCA 59 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 1 4 4 80 X 16188804 16188822 TCTGAAGGAAGACTGCCAG 59 16188672 16188763 ACTATGATAGGTGTACCTGGTG 58 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 1 4 4 83 X 16193687 16193705 CAGTGGCTTGATCTTGTGC 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 1 5 5 108 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276867 16276947 CAAAGTTGTGCAAGTCCTG 57 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280 1 1 3 86 X 16342748 16343913 TTATGAACACGCTAGCGGA 59 16343963 16343981 AAATTGCCGACAAATGCGA 59 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298 1 2 4 80 X 16380926 16381924 ATTATCATGATCACAAGGACCG 58 16380867 16380888 TCATGAAGCTGTGCATAAAGTC 59 NA Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 3 2 2 81 X 16444489 16446383 TCGAAGTCAAGGATCTGATGG 59 16444428 16444446 CCGTTCTCCATCGGATAGG 59 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074368 1 1 7 120 X 16588401 16588666 CACTAGATAAGCATGTGTACTGTC 59 16588304 16588322 TTGTGTTGCAAGTTGCAGG 59 NA InUTR Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 1 2 2 87 X 16692801 16692819 CTGGAGGATCCGAATGGAC 59 16692667 16692685 TAGAACTGCACCCAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096 1 1 2 80 X 16843603 16845030 GATGACAATAACCTGCTTCGA 58 16845072 16845090 CTTGAACGTAATCCGCTCG 59 NA Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 1 2 2 80 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492354 17492373 TCTGTATTGTCATCGCCTCC 59 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 1 3 4 175 X 17767426 17771464 TAAACAGAAACTGTCCGCT 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 1 2 2 80 X 17974381 17974458 TTTCACAGTCCGAACTATGC 58 17974320 17974338 GCAAGAGGACACAATCGAG 58 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 1 3 3 80 X 18095254 18095333 ACCAGATGGTAGGACAACAG 59 18095373 18095394 CCATCTGATCGAAGATCTTGTC 58 NA Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 2 2 2 80 X 18392028 18392047 AAGGTCATCAGGAACAAGGA 58 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302863 1 1 6 80 X 19418180 19420879 CTGATAACGATGACAAGAAAGGG 59 19420919 19420937 TGTTGTTGGTTGAGGTCGT 59 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 3 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407 1 2 13 91 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20104509 20105411 TAGCATGAGCTTTACGTGG 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406,FBtr0089407 3 2 13 92 X 20105881 20105899 TCTACACAAAGCAGACCCA 58 20104509 20105412 TAGCATGAGCTTTACGTGGA 59 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 3 2 8 85 X 21251051 21251069 ATGAAGTCCAGCTTCTACG 57 21251117 21251692 CCAAAGGATCTTAGCCTCTC 57 NA Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 2 2 2 60 X 22386603 22386681 GCACTTCAGATATGGTTCGG 58 22386562 22386581 GATACCCTTGATCTTGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17159 FBgn0039945 FBtr0113717,FBtr0302542 2 2 3 68 XHet 71069 71087 CAGGATATGCGCAGTTTCG 59 69218 71037 TAGTATCGTCGGATCTGGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 2 5 5 60 XHet 66315 67541 CTATAGCTGCACGATTGCC 58 66273 66291 CTGTCCTCTACATCCACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 snmRNA:254 FBgn0065100 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33738 FBgn0053738 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U14:30Eb FBgn0063391 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Ag FBgn0011937 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30232 FBgn0050232 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32361 FBgn0052361 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U2134a FBgn0086051 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-92a FBgn0067682 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41509 FBgn0085792 FBtr0114245 3 1 1 175 YHet 328062 328080 ACCACTAGGTTCGAATGGC 59 327814 327923 AAATAGTCGCCACGATCGT 59 NA Drosophila melanogaster 61 CG40441 FBgn0058441 FBtr0113890 2 1 1 60 YHet 205239 205259 GCAGCACATCATAAAGTTCGT 59 205199 205218 GCAACCATCCTTAAAGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:U3:9B FBgn0065046 FBtr0091641 3 1 1 110 X 10242244 10242262 GTTGAATCGTTCTGTCCGG 59 10242336 10242354 TCTATCCGTTCAAACCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3436b FBgn0086602 FBtr0091803 1 1 1 113 X 6636486 6636504 GGTGGTTATCCTCCATGGA 58 6636391 6636409 AAGGTTCAGGTAGAGACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17598 FBgn0031194 FBtr0077364 1 1 1 143 X 21940540 21941578 GGCAAGTTCTTTCGGATCC 58 21940415 21940433 AGTCCACTAGCTTCTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 waw FBgn0024182 FBtr0100536 2 1 1 60 X 21234579 21234598 ATCTGCTGAACCTCATTGAC 58 21234621 21234697 GATCGCGAAACTTCATTGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1722 FBgn0031168 FBtr0077237 3 1 1 60 X 21121743 21121761 AGGACCAGACTCATAGACG 57 21121701 21121720 GGAACAGTACCGAAGTACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 2 2 3 192 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077431 21077449 TTTGAGTTGGGTAGGCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1503 FBgn0031157 FBtr0077260 2 1 1 69 X 20976666 20976684 AAACAGTTCATCCTGGTGC 58 20976345 20976363 AAATCACCAGTAGGGACCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG11943 FBgn0031078 FBtr0074798,FBtr0074799 1 2 2 80 X 19750012 19750132 TACATGGATAAACAGCGTCAC 58 19750172 19750192 ATGGAACAGATGGTAAATGCG 59 NA Drosophila melanogaster 61 CG15043 FBgn0030929 FBtr0074626 1 1 1 131 X 18387950 18387968 ATCCAGCAGATGGAGAAGG 58 18387764 18387783 TGGGAATTCGTAAGTGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6123 FBgn0030913 FBtr0074578 3 1 1 97 X 18224544 18248916 CAAAGTGTCAACAAGGACAC 57 18224466 18224484 GAATTCGCTACCGACTGTC 58 NA InUTR Drosophila melanogaster 61 Arp8 FBgn0030877 FBtr0074544 1 1 1 116 X 17754683 17754769 AAAGCAAACGATGCAACGA 59 17754585 17754603 ATAATCTTTGGCGCCTCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32557 FBgn0052557 FBtr0074466 2 1 1 165 X 17748760 17749267 TACCTCCAGTCCAAATTCCG 59 17748614 17748632 ACACCTCGATGTTCATCCC 59 NA Drosophila melanogaster 61 par-6 FBgn0026192 FBtr0074455 3 1 1 80 X 17597693 17597714 AACAAGATAAACACAACGTCCG 59 17597754 17598419 AAACTCTGCATCGAACTTCG 59 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 2 2 2 80 X 17497496 17497738 ACAAAGAGGGTCTCTTGGA 57 17497781 17497800 CAAGTTGAGTGGATCCAAGG 58 NA Drosophila melanogaster 61 p-cup FBgn0030840 FBtr0074437 1 1 1 81 X 17341076 17341190 CGAATTAGCCAGAAGCTAGAG 58 17341015 17341036 CAAACAACAAATAGGATCGCTC 58 NA Drosophila melanogaster 61 B-H1 FBgn0011758 FBtr0074430 2 1 1 98 X 17295641 17295659 TACCTTAGCGTTCAGGAGC 59 17295721 17295873 CTTCCATTTGGTTCTGCGG 59 NA Drosophila melanogaster 61 B-H2 FBgn0004854 FBtr0074429 3 1 1 254 X 17215117 17216701 AATCGCAGAACCAAATGGA 57 17216919 17216937 TTGATACATGCGGTACGAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 1 1 1 67 X 17107074 17107267 TTTGATTCTAGATGCTGCGA 57 17107297 17107315 TAACCTCTGTGTTCAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13002 FBgn0030804 FBtr0074343 3 1 1 103 X 16783946 16784024 TTCGAGGGATTCAGAGCAC 59 16784090 16784109 CTGACGAATCGGTGTATTGC 59 NA Drosophila melanogaster 61 CG9782 FBgn0030763 FBtr0074288 2 1 1 208 X 16510369 16515372 ACTTCAACATCTGCCTGCT 59 16510179 16510197 TTCCTCGTCATACTCCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9784 FBgn0030761 FBtr0074289 1 1 1 60 X 16491652 16491670 CGTCAAGCGGTATAGGGAG 59 16491610 16491628 GTTCAGATCGCCAAACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 2 2 2 98 X 16483582 16483674 GATGAGATAGATCAGGCGC 57 16483502 16483522 GAACGTTGTCGTAATGAACTG 58 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 2 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 3 7 7 84 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881953 15881977 CATAGTCATCCGAAATAGTCATACC 59 NA Drosophila melanogaster 61 Scamp FBgn0040285 FBtr0074080,FBtr0074079 2 2 2 96 X 15343739 15343758 AATCTGGACAATCCGTTTGC 59 15343466 15343489 CGAATGGATTGTAATCCTCAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 3 3 3 85 X 15219543 15219623 CGAGTCCGAGTATCATTCGA 59 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021 1 1 2 64 X 15165877 15166027 ATATTCAGATATCCCGAACCG 57 15165833 15165851 AAGAGGTGGACGGATTCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG12398 FBgn0030596 FBtr0073976 1 1 1 161 X 14807144 14807218 AGATATAGATTTCCTTCGCCAC 57 14807004 14807022 TCCTTTGTTGGCACTACAG 57 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0114621,FBtr0073990 3 2 4 110 X 14725202 14725220 CAATGCCCTCAAGATGTGC 59 14724366 14725128 GTCTCGTAGTATGGCCTGG 59 NA Drosophila melanogaster 61 nmdyn-D6 FBgn0030573 FBtr0073933 3 1 1 116 X 14477976 14478070 TTATGAACAGCGGACCCAG 59 14478149 14478168 AGTTGGGATCACTGTACACG 59 NA Drosophila melanogaster 61 CG10996 FBgn0030525 FBtr0073836 3 1 1 60 X 13691616 13691636 AGGACATCTTTGGTATTGCGA 59 13691576 13691594 TAGCGACGAATCACTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34324 FBgn0085353 FBtr0112526 3 1 1 275 X 13351528 13351642 GAGAGTTTACCACTTGCTGC 59 13351272 13351290 GTAGTAATGCACGGAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32635 FBgn0052635 FBtr0073780 2 1 1 81 X 13377307 13389879 CAAGCAGTTTACGCTTCTG 57 13389924 13389942 TCGACAGCATTATCAACGA 57 NA Drosophila melanogaster 61 CG1764 FBgn0030467 FBtr0073796 2 1 1 106 X 13190038 13190557 GATTGTGGCCAGAATCTCG 58 13189950 13189968 GACCAATGGTCCTCAGGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15743 FBgn0030465 FBtr0073755 2 1 1 89 X 13180832 13180850 CACAGATACCGGATGTGAC 57 13180903 13180997 ATAGCTCCTCGGTGAACTC 58 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202 2 1 3 222 X 13152251 13152398 CGCTAACTTTCTTTCGATGC 58 13152048 13152066 TGCATCTTTAGCATGTCCA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG2453 FBgn0030460 FBtr0073737 1 1 1 80 X 13087658 13087732 CATGTGGATAAGGTTCTTTCTG 57 13087599 13087617 CAGATGACTGAACTCCAGG 57 NA Drosophila melanogaster 61 CG15717 FBgn0030451 FBtr0073723 3 1 1 208 X 13023168 13023186 AGGATCACCAGCTACATGG 58 13023475 13023493 CTCTCCTGGAGTAGCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 lic FBgn0261524 FBtr0073720 1 1 1 116 X 12986247 12986327 CATCTCAGGCTACCTCGTC 59 12986407 12986425 GACCTGATGTCGTATTGCG 58 NA Drosophila melanogaster 61 CG4400 FBgn0030434 FBtr0073693 1 1 1 80 X 12803204 12803289 AGGATTTGCTGAGCTTGGA 59 12803142 12803162 GTCGTTCGATGAGATTGATGC 59 NA Drosophila melanogaster 61 RpII215 FBgn0003277 FBtr0073542 3 1 1 85 X 11461123 11461147 CTCACTGAGTACAACAATCTAAAGG 59 11460998 11461081 ACACAAGCAATAACCTGGGA 59 NA Drosophila melanogaster 61 CG15194 FBgn0030302 FBtr0073501 3 1 1 115 X 11354101 11354119 CTCAATCACATCGGACTGC 58 11354720 11354738 TTGGGCGTCTGGATATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1545 FBgn0030259 FBtr0299600 2 1 1 80 X 10952445 10952463 TGGAGAATTTAAGCGACCC 57 10951819 10952403 TCACAGTACGGATAAATTGGC 58 NA Drosophila melanogaster 61 CG42339 FBgn0259241 FBtr0299862 2 1 2 107 X 10871823 10871841 CACGCACAATCATCATGTC 57 10863487 10871753 AATTCCACGCAGTATTCCTG 58 NA Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0071487 2 1 2 135 X 10101697 10102018 GTCACAAGAAAGAGGACCAC 58 10101581 10101600 GTAGATAGGCCTGAAACGTC 57 NA InUTR Drosophila melanogaster 61 ric8a FBgn0028292 FBtr0071317 2 1 1 81 X 9150341 9150359 GCACCTGAAACGACTAGAG 58 9150404 9150487 CAGATCCGCATTCTTTGTG 57 NA Drosophila melanogaster 61 Dsor1 FBgn0010269 FBtr0071313 3 1 1 87 X 9143720 9143809 CTCAAGACCCTGCTGAGTC 59 9143860 9143878 GGTCCATTGTCTTGCACAC 59 NA Drosophila melanogaster 61 Dip1 FBgn0040467 FBtr0071302 3 1 1 191 X 9053048 9053066 GGTGGAACCGAAGAATGAG 58 9053283 9053302 CTCTAAAGATCCTTGTGCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dalao FBgn0030093 FBtr0071300 3 1 1 60 X 9044326 9044344 TTCCAGGAGGAGCTAAAGC 59 9044367 9044386 TCTTCTGGAAAGTTTCCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12112 FBgn0030048 FBtr0071233 3 1 1 81 X 8453730 8453753 CAATTATGTATGAGGAGGATCTGG 58 8453599 8453693 CGCATGGAATTCGTATAGATCC 59 NA Drosophila melanogaster 61 CG10761 FBgn0030015 FBtr0071187 1 1 1 60 X 8055832 8055855 CTACGAGGAGAACAAGTTATTGAG 59 8055795 8055815 CTTGATGGTCACAAAGGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2129 FBgn0030008 FBtr0071155 3 1 1 60 X 8040356 8040376 AGGCAGAAGCATAATCAAGTG 58 8040398 8040416 TTGACGTAGAGATTCGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10778 FBgn0029980 FBtr0071131 3 1 1 187 X 7826320 7826581 ATGATGTGGCAGTTAAGCAC 59 7826152 7826170 CGTTCGCTGTAGAAGTCAG 58 NA Drosophila melanogaster 61 Ir7f FBgn0259188 FBtr0299672 2 1 1 118 X 7777632 7777703 CTATCAGGGTTTGCTGGAC 57 7777532 7777550 TCAATTGAAGCTCCTTGGG 57 NA Drosophila melanogaster 61 CG32720 FBgn0052720 FBtr0071082 3 1 1 81 X 7430035 7430053 CGAAACACAACGATCATGG 57 7429759 7429990 TCGTTTAACTGCTGGTTGG 58 NA Drosophila melanogaster 61 Atg5 FBgn0029943 FBtr0071065 3 1 1 80 X 7216639 7216657 GGCTAATGGAACCGTATGG 58 7216493 7216595 TGTACGTGAAGTCATCGTC 57 NA Drosophila melanogaster 61 CG14427 FBgn0029931 FBtr0071010 2 1 1 60 X 6935379 6935398 GAGGTTCAAGGTGGATTTCG 59 6935420 6935439 TTGGTAGGTGGTGTACATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3184 FBgn0029892 FBtr0070989 2 1 1 60 X 6582528 6582546 CGAAACGTCTGCCATTCTC 59 6582486 6582504 GGGATTACACTCACTGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dx FBgn0000524 FBtr0070914 2 1 1 142 X 6431034 6431121 TGTTTACGACATTGCATCGG 59 6431226 6431244 ATGCAATCTTGAGGAAGCG 58 NA Drosophila melanogaster 61 Rbcn-3A FBgn0023458 FBtr0070939 3 1 1 80 X 6146592 6146677 CACTTTCTGGATTACAGATGGG 58 6146533 6146551 CTCCAGATTCCAGGACAGG 59 NA Drosophila melanogaster 61 cv FBgn0000394 FBtr0070804 2 1 1 88 X 5586122 5586203 GGTCATTACTTCTTGAGAACCA 58 5586252 5586270 ATAACCGTGCAGTTTACGG 58 NA Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 3 2 2 85 X 4432733 4432816 ATCATGACGAACACGTGGT 59 4432666 4432686 GATAATCTCAAAGTGCTCGGC 59 NA Drosophila melanogaster 61 CG3556 FBgn0029708 FBtr0070674 3 1 1 83 X 4427223 4427305 CCTCGAGGGTATCACTACTG 58 4427351 4427369 CGCAATAAGCTGATTCCCG 59 NA Drosophila melanogaster 61 Xpac FBgn0004832 FBtr0070670 2 1 1 102 X 3998012 3998030 CAAGTTGGTTTCGCATCCA 59 3997863 3997881 CTGCACCTTGATCACAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16781 FBgn0029661 FBtr0070530 1 1 1 80 X 3357851 3357931 AGCCGCGTTATCATATGGA 59 3357789 3357807 CATCAGCATTCGACAGCTC 59 NA Drosophila melanogaster 61 Pig1 FBgn0003086 FBtr0070537 3 1 1 60 X 3143091 3143111 GATAGTAACCTCAACCACGGA 59 3143051 3143069 AGCATCATCTGAGGAACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttm50 FBgn0250874 FBtr0070497 3 1 1 91 X 2624732 2624812 CGCTTTCCTAAAGATAATTGCG 58 2624662 2624680 ACTGGTTGATGGGATCGTC 59 NA Drosophila melanogaster 61 Csat FBgn0024994 FBtr0070501 1 1 2 161 X 2597433 2597548 TAGCATACACATGAACGCC 58 2596778 2596796 ATCAGTTTGGCGAACTCTG 58 NA Drosophila melanogaster 61 CG2662 FBgn0024993 FBtr0070478 3 1 1 201 X 2592821 2592839 TGAAACAATCCAAGGACGA 57 2593004 2593087 TGTTTGGGTTTCTTCACCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG32797 FBgn0052797 FBtr0070461 2 1 1 60 X 2319242 2319261 CTCGATGATTTCGAAACGCA 59 2319201 2319219 CAGCATCAGTGAGGTAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kz FBgn0001330 FBtr0070419 2 1 1 80 X 2132203 2132283 GAATAGCGATCCTCACTTCCT 59 2132143 2132161 CATAAAGGCGTCAGTTCGC 59 NA Drosophila melanogaster 61 CG14803 FBgn0023513 FBtr0070310 3 1 1 87 X 1763268 1763341 GAGGCCTGTAAGAATGTGC 58 1763391 1763410 AACCAGAGTTCATAGAGGCG 59 NA Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 1 2 2 94 X 1347991 1348058 TCTATACGATCGTGGGAGC 58 1348116 1348134 CTGTCCGTTGGAATCACTG 58 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 1 2 2 84 X 1265799 1265960 GACTTCAAGACCGGATATAGCT 59 1266005 1266023 TTAGCTTCTGGATGGCGTC 59 NA Drosophila melanogaster 61 CG14624 FBgn0040357 FBtr0070204 1 1 1 70 X 1100986 1101004 CACTACCTTCTCTGACGGC 59 1101038 1101056 AACTGGAGGAAAGGTCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13364 FBgn0026879 FBtr0070159 2 1 1 77 X 519117 519199 GTATAAGCGAGCAAGTATGTCTG 59 519062 519081 TCTTTGGAGTCCTTCTTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107,FBtr0070108 1 2 2 152 X 139494 139512 GAATCTCACGGACTTCCAC 58 139295 139313 TCTTCCAGTTTGCTTTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CR40450 FBgn0085734 FBtr0114183 1 1 1 107 U 2073843 2073861 AACAATAGCAAGCCAGCTG 58 2073493 2073511 CTGATTGCTACTGGTGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG42620 FBgn0261335 FBtr0302239 1 1 1 60 U 8502229 8502250 GTTATGCAGGAGTTATTGTCCG 59 8502270 8502289 CTATTTGCTGGCACTCTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40930 FBgn0085538 FBtr0302237 1 1 1 60 U 7129994 7130012 ATGCTACCGAGGTGATCTG 59 7130034 7130054 TGTACCAGCGTTATATCTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gpa2 FBgn0261386 FBtr0113763 2 1 1 60 U 2295814 2295834 CCTGATTGTGTCGAGTTTACC 59 2295774 2295793 AGAAGGACTCACAGAATCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32017 FBgn0052017 FBtr0300992,FBtr0300993 2 2 2 80 4 1161982 1164083 GCTGGGATCATTACGAATGAG 59 1161922 1161941 CCATTTGGCTCTCGATTGAG 59 NA Drosophila melanogaster 61 CG11152 FBgn0039937 FBtr0089251 3 1 1 95 4 859684 864925 GATAAATCGTCGAATTGGATGG 57 859610 859629 AAGCACATATGTCAGAGTGC 58 NA InUTR Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089994,FBtr0089993,FBtr0089996 2 4 4 80 4 581376 581394 CTTGGCTCTTTCAACTGCA 58 581437 584996 TTTGGTGGACCTAGAGAAGC 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089994,FBtr0089993,FBtr0089996 1 4 4 80 4 581375 581393 ACTTGGCTCTTTCAACTGC 58 581437 584995 TTGGTGGACCTAGAGAAGC 58 NA Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342,FBtr0083341 3 2 4 91 3R 12579511 12598586 AGAACAACATAGCACTCACAC 58 12579440 12579458 ACAGTCCTCTGGAGTTGTG 59 NA Drosophila melanogaster 61 CG15561 FBgn0039829 FBtr0085776 2 1 1 60 3R 27041010 27041028 CAAGCTGAAGACTACGCCT 59 27040968 27040988 CACACTGTCATCAACTGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1542 FBgn0039828 FBtr0085757 3 1 1 207 3R 27039469 27039545 AACGATGTGACCAAACTGC 59 27039716 27039734 CATTCAGGACGGGATCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085701 2 1 2 212 3R 26599450 26599718 GAGTATCAGTCCCTCAGCG 59 26599894 26599912 GTTGTTCATGGACTGGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34432 FBgn0085461 FBtr0112733 2 1 1 60 3R 26474919 26474940 GATTTACTGCTCATCCAACCTG 59 26474958 26474979 CCAAGGTGTAGAATAGGAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31021 FBgn0051021 FBtr0300983 3 1 1 80 3R 26429228 26429248 TTCTACATAGTCGAGTACGCT 58 26429290 26429368 CAGCTTTGGGAACTTTGTG 57 NA Drosophila melanogaster 61 CG31031 FBgn0051031 FBtr0085566 1 1 1 94 3R 25888995 25889013 TTCTACAATGGCCCTGCTC 59 25889071 25889089 TACGGATGGTACCTTTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stg FBgn0003525 FBtr0085397 3 1 1 194 3R 25080750 25080771 GAGTGACCAAGAACAAATTGTG 58 25079666 25080597 GAACTGCTGGTGTTATTACTG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11843 FBgn0039630 FBtr0085363 2 1 1 93 3R 24880276 24880294 ATATGGAGGCTGTTCTCCC 58 24880349 24880509 TGTATCTAGAGCAAGATCCCA 57 NA Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 1 3 3 87 3R 24852820 24852839 CAAATGCTCTAAGCTTGACC 57 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11828 FBgn0039616 FBtr0300734 3 1 1 80 3R 24748920 24748992 AACACAATGCGGACTTTCC 59 24749034 24749054 ATTAGCCACATAGGACGTAGG 59 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 3 1 1 61 3R 24108436 24108455 GATGGCACTGGTCTTATTGC 59 24108476 24108557 CAAAGTATTTGTGAATCAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 RpS10a FBgn0027494 FBtr0085194 2 1 1 60 3R 23478961 23478979 GAATGGACAAGAAAGGCGA 58 23479003 23479021 AAACCGCCACGATATTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34294 FBgn0085323 FBtr0112490 3 1 1 78 3R 23465821 23465839 ATATTGAGCCTGTCGAGGA 57 23465761 23465779 GCACAAATCTCTGAGTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13972 FBgn0039522 FBtr0085212 1 1 1 60 3R 23342392 23342410 GGAGATGGCAAACCTTGAG 58 23342350 23342369 CAGACCCTTATCCTCGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 3 3 3 83 3R 23081101 23081182 GCATTATGCCTGTTAACATCAC 58 23081226 23081244 CAGGCACTTGTATGGTGAG 58 NA Drosophila melanogaster 61 gb FBgn0039487 FBtr0085132 3 1 1 94 3R 22936359 22937002 TGATATTCGTACCAACGACCA 59 22936285 22936303 TTTGGGAATCTCACAGGCT 59 NA Drosophila melanogaster 61 CG17192 FBgn0039472 FBtr0085153 1 1 1 84 3R 22843900 22843974 TTAGTAGCGGGTAATGCCC 59 22843834 22843852 GAAATGTGCCATCCTCCTG 58 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 2 5 5 80 3R 22809871 22809890 CCCAGTATGCCTATGGAAGG 59 22809931 22810009 ACTTAAAGATTTGGCTCTCGC 59 NA Drosophila melanogaster 61 TwdlJ FBgn0039440 FBtr0114538 2 1 1 63 3R 22456209 22456227 GTGCACTTCGTCAAGTACC 58 22456254 22456272 GACCCTGAATTGCACTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pdf FBgn0023178 FBtr0085024 1 1 1 71 3R 22281566 22281584 ATCCTCGAGAACTCCTTGG 58 22281513 22281533 CAACAAGGAGTTGATTAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42498 FBgn0260224 FBtr0300624 2 1 1 60 3R 21883795 21883879 GAATCCATAATAAGAGTGCCGT 58 21883756 21883774 GGACTTTGTAGGCGATCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm5 FBgn0002631 FBtr0084979 3 1 1 60 3R 21854891 21854909 AGCGATAACGAGGACTCTC 58 21854849 21854867 GCCACATGGTTTCTTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst57Dc FBgn0011670 FBtr0084916 2 1 1 60 3R 21655344 21655362 CCTGGGATCTAACGGTGTG 59 21655302 21655322 CATATTTCTTTCGGCCTTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 2 2 2 82 3R 21505842 21505860 TAGTTCGGTCACCCAAACC 59 21505715 21505796 GGATCAAGCATGCCAACAC 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113351 1 1 5 72 3R 21151117 21151140 CACATAAGCTACTGAAGTCATACC 59 21149520 21149539 TTGCCAGACTCATCATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 1 2 2 133 3R 21085146 21085227 CTCTCACAGACCTACCAATCC 59 21085322 21085340 TAGCACACGATGTACCAGC 59 NA Drosophila melanogaster 61 CG31108 FBgn0051108 FBtr0084802 2 1 1 80 3R 20940743 20940763 GGACCATGGATAGTTAAGCCA 59 20940628 20940703 TTGAGGTATTTGATCTGGCGA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100623,FBtr0100629,FBtr0100624,FBtr0301582,FBtr0100633,FBtr0084683,FBtr0100638,FBtr0100635,FBtr0084685,FBtr0084684,FBtr0100627,FBtr0100631,FBtr0100636,FBtr0301581,FBtr0100634,FBtr0100622,FBtr0100637 1 18 18 80 3R 20501032 20501367 ATACATCTGCTGGAGAACTCTG 59 20501404 20501426 GAAATAGACACAGGTCCAATACG 59 NA Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 1 2 2 85 3R 20313249 20313267 TTGATGTGCGCTACTTTCC 58 20313314 20314182 CAAATCGATCTGATCACCGTC 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084580 1 1 3 90 3R 19977630 19977648 GGAATGGAGTAATAGCGCA 57 19977458 19977576 TTAATGGTGCCTCTGTTCC 57 NA InUTR Drosophila melanogaster 61 Tbp-1 FBgn0028684 FBtr0084452 1 1 1 163 3R 19578938 19579022 AGATCAAGGTCAACAAGACAC 58 19579147 19579165 GAAATACGCCTGTCGAGTG 58 NA Drosophila melanogaster 61 CG10232 FBgn0039108 FBtr0084471 1 1 1 80 3R 19545591 19545675 CAAACGCCAGTTCGATATACC 59 19545531 19545551 CAATGGGTGATTATGCAAGGG 59 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425,FBtr0301859 1 3 3 108 3R 19341012 19341030 GCTTTATCCTGTCTTGGCT 57 19340869 19340940 CAACCAGATTCCTCTTGGT 57 NA Drosophila melanogaster 61 Ir94f FBgn0051225 FBtr0290293 1 1 1 60 3R 19308084 19308105 ACTTGTTTATCAGGCATACCTC 58 19308124 19308144 ATGTCCTTTCAGATTTCCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42686 FBgn0261572 FBtr0302858 3 1 1 198 3R 18483996 18484014 CCACCAACATCAGAATGCG 59 18484176 18484454 AGCTGGAATTCTGAGGAGC 59 NA Drosophila melanogaster 61 CG13843 FBgn0038993 FBtr0084269 1 1 1 80 3R 18435813 18435880 TCGTCAATCAGTCAAACACC 58 18435923 18435941 CTACGCGTTGATCTAGCTC 57 NA Drosophila melanogaster 61 CG6937 FBgn0038989 FBtr0084266 1 1 1 184 3R 18411078 18411159 AAGGTTGTCAATAAGGCCG 58 18411307 18411325 AAGTTGGAGAAGTCGATGC 57 NA Drosophila melanogaster 61 CG13857 FBgn0038958 FBtr0084234 3 1 1 81 3R 18219772 18219794 CGTTAGCATTTCGATTAGGACTC 59 18219232 18219734 GTTACCCATTTGATAGCTGGTC 59 NA InUTR Drosophila melanogaster 61 CG6690 FBgn0038918 FBtr0084149 3 1 1 60 3R 17738582 17738602 AATGTTCTTAACAGAGACGGG 58 17738620 17738642 CCTCAAATAGGTGATTCACTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6800 FBgn0038902 FBtr0084132 3 1 1 186 3R 17602473 17602491 AACCGGAGTGGATATGTGG 59 17602702 17602773 GTTGGGAAACCGTATCTTGC 59 NA Drosophila melanogaster 61 mun FBgn0261342 FBtr0302264 1 1 1 80 3R 16215732 16215750 TTTACTACCATCCACCGCC 59 16213333 16215691 ACTCCAACTTTAATCTGCACTC 58 NA Drosophila melanogaster 61 CG4367 FBgn0038783 FBtr0083901 3 1 1 133 3R 16130510 16130528 TGCATTATATTGCGGTGGA 57 16130334 16130352 TTACAATCACTCCACTGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4367 FBgn0038783 FBtr0083901 2 1 1 132 3R 16130510 16130528 TGCATTATATTGCGGTGGA 57 16130335 16130353 TACAATCACTCCACTGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 3 2 2 81 3R 16114873 16114959 CATGGCGGATATTACGCTG 58 16115004 16115022 TACGTAGACGAAGCTTCCG 59 NA Drosophila melanogaster 61 CG31206 FBgn0051206 FBtr0083875 1 1 1 80 3R 15933216 15933309 TCACCGATATGCTCATAATGTG 58 15933157 15933177 AGATTTCCATGAAACCTGGAC 58 NA Drosophila melanogaster 61 CG4538 FBgn0038745 FBtr0083855,FBtr0083856 3 2 2 104 3R 15725672 15725690 AGGTGGACCTTACGTTCAC 59 15725521 15725607 GCAGTTGTTCCATTATAGAGCG 59 NA Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 1 2 2 138 3R 15137648 15137667 CTCAACTACTACGGATCCGG 59 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 CG42359 FBgn0259705 FBtr0299958 1 1 1 286 3R 14987838 14987856 ATTTGCAGAGAAGCATGCC 59 14987494 14987512 ATCGGTGTGATAACCTGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 1 4 4 96 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981434 14981452 GTCAAGCACCTTGTTCACG 59 NA Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 3 1 1 78 3R 14804290 14804383 ATCTCATCAAGAGCATGGC 57 14804230 14804248 TCATCGGAAATGGTGACCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 2 2 2 93 3R 14509014 14509033 CTTCTGTCCTATGTTGCAGC 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG31230 FBgn0051230 FBtr0083666 3 1 1 60 3R 14497511 14497531 GAAGATGAACAGAAATCGTGG 57 14497552 14497571 TAAGGAGAATACGAGCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 koko FBgn0051232 FBtr0289999,FBtr0083625 3 2 6 135 3R 14225621 14225639 TATCCAGCGATCCAACCAG 59 14225797 14225816 TTTGGACAGATCCTGATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 2 1 1 184 3R 14179361 14179436 AAAGGATCAGCCTTGAAGG 57 14179195 14179214 CTTAACCACCTCGATGTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14313 FBgn0038579 FBtr0083615 1 1 1 92 3R 14017269 14017291 CAGAACTACAACATCAGCTTCTG 59 14017127 14017147 CTGCATGATGCTAAAGGTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Arp5 FBgn0038576 FBtr0083557 2 1 1 80 3R 14011978 14011997 TATCCTACGGCATAGATGCG 59 14012098 14012116 AAATGATCAGGGCATCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7785 FBgn0038564 FBtr0083539 3 1 1 95 3R 13848387 13848462 CATTTATGTGGGCAATGGC 57 13848520 13848539 GACTGTTCCAATAGAATGCG 57 NA Drosophila melanogaster 61 CG14326 FBgn0038528 FBtr0083467 3 1 1 129 3R 13444862 13444945 AGATTAGCTGTTCGCTGCT 59 13445036 13445056 ATACGATTGTCTACTTGCCCA 59 NA Drosophila melanogaster 61 CG7606 FBgn0040565 FBtr0300628 1 1 1 72 3R 13422448 13422466 GATGTCCTTCCTCTTCCGG 59 13422557 13422575 AAGGCAAAGTTCTGAAGGG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Sgs5 FBgn0003375 FBtr0083461 3 1 1 94 3R 13421545 13421563 AATCGAAAGCCAGGATCGA 59 13421619 13421698 TAAGTCAGGAATGGTTTGCTG 58 NA Drosophila melanogaster 61 CG34035 FBgn0054035 FBtr0100090 1 1 1 80 3R 13238975 13239055 CCAGATTATGAGTTGACCATCAC 59 13239094 13239113 GGGTTGATAAACTGCAGGAC 59 NA Drosophila melanogaster 61 m-cup FBgn0038488 FBtr0083414 3 1 1 81 3R 12973061 12973144 TGATATCGTCAAGTTCCTGGT 59 12973000 12973018 CGAGTTAATCAGGCAGGTG 58 NA Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 1 2 2 80 3R 12805250 12805270 CAACGTTAACGACTCAGTGAC 59 12805119 12805208 CGTTTCAGACTGTCCAGGA 59 NA Drosophila melanogaster 61 CG31498 FBgn0051498 FBtr0083339 2 1 1 60 3R 12491089 12491107 TTTGCGATTCTGCTTTGGG 59 12491131 12491149 CGAGTCGATTTCTCAACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 modSP FBgn0051217 FBtr0083353 1 1 1 80 3R 12479022 12479043 CGCAATTACGGAGAAACTACTC 59 12478906 12478981 CCTTCCTTTGTAGCCAGGT 59 NA Drosophila melanogaster 61 CG14903 FBgn0038446 FBtr0083303 1 1 1 87 3R 12399311 12399329 CACTTGAATTCCGAGGACG 58 12399110 12399260 TCTCATCTTTGGCCTCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 3 1 1 65 3R 12307855 12307873 CTCAAGTGCAATCCCATGG 58 12307752 12307826 GATTGTGGACGCATATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 1 2 2 97 3R 12195609 12195627 CCAATCGGCCAATACTGAG 58 12195390 12195549 TACGCACGCCTTTATTAGTG 58 NA Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 3 2 2 80 3R 12187838 12187914 ATCTCCTAATTGGTCAGCGG 59 12187777 12187795 CCAGAAGATCGGGTCTTGG 59 NA Drosophila melanogaster 61 sra FBgn0086370 FBtr0083255 1 1 1 262 3R 12012940 12012958 CAACAACGGTGGAGAAGAG 58 12021913 12021933 TCGACTTCAGTTTGTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5478 FBgn0038386 FBtr0083242 2 1 1 60 3R 11758812 11758833 CACCAAGATAAAGATCACTCCA 58 11758773 11758794 TTCGATGGTAGCCTTTATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 1 2 2 91 3R 11660726 11660745 GTGCGAATATTGAGAGCGAC 59 11660799 11660927 CACGTCGGACTTGATTTCG 59 NA Drosophila melanogaster 61 CG6236 FBgn0038318 FBtr0083121,FBtr0083122 1 2 2 80 3R 11151701 11151721 GCCCAAAGTATTGTAAATGCC 58 11151564 11151660 TACACGGTGAATCTCCAGAG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089967,FBtr0089962,FBtr0089958,FBtr0089964,FBtr0301960,FBtr0089965,FBtr0301959 1 7 13 171 3R 11126787 11128884 CTAAAGGAGGCTGAGGCTC 59 11133384 11133404 TTGTCGCTTATTCCTTGAGGA 59 NA InUTR Drosophila melanogaster 61 Rrp6 FBgn0038269 FBtr0113235 3 1 1 96 3R 10711477 10711570 AGGCATTCACAAACAAAGGG 59 10711400 10711418 TAGCTTAGGTAAAGGGCGC 59 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0082959,FBtr0112893,FBtr0082958 1 3 3 60 3R 10430269 10430289 CTTTCCTGAAGAACCACTTCG 59 10430309 10430417 AAATTGAATGGTTTCCGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630,FBtr0112631 3 3 3 80 3R 10221737 10225450 ATGTACGAAGATCATCAGTTCC 58 10221678 10221696 CTGCAACTGATCGTTCTCG 59 NA Drosophila melanogaster 61 CG3259 FBgn0038221 FBtr0082924 3 1 1 161 3R 10128969 10128987 TCCGTCACCAGTTAAGCAG 59 10129109 10129195 TTTAATGGAGGAACCATTTCCG 59 NA Drosophila melanogaster 61 Ipp FBgn0016672 FBtr0082865 2 1 1 111 3R 9785127 9785429 GATCCAATTGACGCTACCG 58 9785504 9785522 CGTAGACGCCAATTAGCAC 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082856,FBtr0082855 2 3 4 97 3R 9471504 9471522 CAGTTCGGACAACCAATCG 59 9468817 9468900 GGAGTTCCTTCTCAGTCGT 58 NA Drosophila melanogaster 61 Ir87a FBgn0038153 FBtr0082784 2 1 1 83 3R 9247597 9247616 GTTAGCATCGAAATGCAGGG 59 9247656 9247777 GACTATCATCTCTATTTCACCATCG 59 NA Drosophila melanogaster 61 CG9799 FBgn0038146 FBtr0082763 2 1 1 156 3R 9212600 9212679 AAAGGAAAGGTTGACAAGCC 59 9212463 9212481 CGAACTTGCGAACAATGAC 58 NA Drosophila melanogaster 61 CG8449 FBgn0038129 FBtr0082778 3 1 1 93 3R 9096141 9096224 CCGTGATAAACTGCTTCTTAGTG 59 9096070 9096088 ATGTCTCAGCACCAGATGG 59 NA Drosophila melanogaster 61 CG5245 FBgn0038047 FBtr0082589 1 1 1 60 3R 8255332 8255404 TTCAACTATGGATCTGGCGA 58 8255427 8255445 TTCTTGAGGTGGTTCGTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GstD10 FBgn0042206 FBtr0082609 3 1 1 104 3R 8191296 8191425 GATTACCACGTAGTTTCCAGAG 58 8191213 8191231 CTGTCATCAGAACAGAGCG 58 NA InUTR Drosophila melanogaster 61 Ect3 FBgn0260746 FBtr0082487 1 1 1 85 3R 7827076 7827094 TACTTCCGTGCTCATCCAG 59 7827143 7827217 TCCACATAGGTTGTCACCG 59 NA Drosophila melanogaster 61 mus309 FBgn0002906 FBtr0082434 2 1 1 80 3R 7564974 7564993 GACCATTGTTATCAGTCCGC 59 7564850 7564934 CTCTTTGCACAGATATCTAGGG 58 NA Drosophila melanogaster 61 CG14721 FBgn0037942 FBtr0082430 3 1 1 178 3R 7561999 7562018 CAATGTCTTCCTGTTGAGCG 59 7562157 7562236 GCTGTGCATGATATAGGTTCC 59 NA Drosophila melanogaster 61 CG6790 FBgn0037915 FBtr0082460 2 1 1 89 3R 7403613 7403693 CTTATTTCGGCTCCCATGG 58 7403542 7403560 TTTCGGTCACGTGTTTCAC 59 NA Drosophila melanogaster 61 scpr-A FBgn0037889 FBtr0082357 2 1 1 77 3R 7067027 7067112 ACAACAAGGGAAACTTCAGTG 59 7067151 7067169 GGATGAGTTTGTGATGCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33631 FBgn0053631 FBtr0091608 3 1 1 87 3R 5889829 5889901 AAGTTCAGAAACCGATACTTCG 58 5889944 5889967 GTCTCATCGATGTATGATAAAGCC 59 NA Drosophila melanogaster 61 CG31407 FBgn0051407 FBtr0082214 1 1 1 60 3R 5848896 5848914 TGGGACGGGATATAGACCA 59 5848854 5848873 GAACCCTCGCAACTATATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 1 2 2 82 3R 5597064 5597084 CGCATTGCTATTATTGGAGGA 58 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 p24-2 FBgn0053105 FBtr0082093 3 1 1 91 3R 5518341 5518362 CTTGTACTTCCACATATCGCAG 59 5518209 5518295 GCTCTACCTTGTAGTTAACAATCAC 59 NA Nonspecific Drosophila melanogaster 61 p24-2 FBgn0053105 FBtr0082093 2 1 1 60 3R 5518313 5518331 AAGTGCTTCATCGAGGAGG 59 5518209 5518295 GCTCTACCTTGTAGTTAACAATCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9396 FBgn0037714 FBtr0082111 1 1 1 80 3R 5397001 5397019 GACTTATCAAGGCCTGCGA 59 5396881 5396957 ATATGGTCTTGGGTCCTGC 59 NA Drosophila melanogaster 61 CG16790 FBgn0037713 FBtr0082112 3 1 1 94 3R 5395404 5395424 TCAGATCGATGAATTCTCCCG 59 5395269 5395287 CATTCGTGTAGATCCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082068 1 1 2 80 3R 5385742 5386651 TTTCTACTACAGCCGAGCC 59 5386695 5386713 GGTTGCTTGAAGATCGAGG 58 NA Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 3 2 2 129 3R 5228663 5228682 CCTTAACATTCTCCAACGCA 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 1 3 3 99 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830303 4830322 CCGGTGAGAGTTTAATTCCC 58 NA Drosophila melanogaster 61 CG31100 FBgn0051100 FBtr0082011 3 1 1 93 3R 4825362 4825773 GCTATTCGGATATGGCATGAC 59 4825289 4825307 TATATCGCCACTGGTCTCG 58 NA Drosophila melanogaster 61 E(var)3-9 FBgn0260243 FBtr0082012 1 1 1 82 3R 4817338 4817415 AAAGCACTTAGAAGAGGGTG 57 4817275 4817296 GTTGAGATTGAAGGTTAACTGG 57 NA Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 2 2 2 61 3R 4476034 4476214 ATTTGTTTGCAACCGGATCC 59 4475992 4476013 ATTATTCAGGCTTAGCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 mRpS18A FBgn0051450 FBtr0081897 3 1 1 81 3R 4388179 4388198 AGTACGAAGTACCATTGCTC 57 4388021 4388137 CTCCTGCTTCTCATGAATCTC 58 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081759 2 1 3 105 3R 3756402 3761500 AATCGAAGAGGCTCGAGTG 59 3756315 3756333 GTAGGTCAGGTACATGGGC 59 NA Drosophila melanogaster 61 CG14598 FBgn0037503 FBtr0081534 3 1 1 224 3R 3265582 3266589 ACTTACTCATTGCTTGTGCAG 59 3266772 3266793 GGTAGTACGATTTCTTGGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 rn FBgn0259172 FBtr0299638,FBtr0299639 2 2 4 60 3R 3127509 3127527 GACATGAGGAGCAGAAACC 58 3126885 3127485 TTGTTGTGCGGCTTATTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14607 FBgn0037488 FBtr0081575 1 1 1 98 3R 3068388 3068457 CAAGTCCAGGCTCAAAGTG 58 3068519 3068537 TGGATATGGTGCAGGTGTC 59 NA Drosophila melanogaster 61 CG31493 FBgn0051493 FBtr0081566 3 1 1 125 3R 2957467 2957556 AAGTTGAAGAGCTGCTTGTG 59 2957644 2957662 CTCGGGATATGATGTGCCT 59 NA Drosophila melanogaster 61 Ccp84Aa FBgn0004783 FBtr0081691 1 1 1 194 3R 2529872 2529946 GCATTCAAGTTTGTCTTCGC 58 2530103 2530121 GTAGGAGAAGCGGTACTGG 59 NA Nonspecific Drosophila melanogaster 61 sunz FBgn0037462 FBtr0081681 2 1 1 111 3R 2456311 2456387 CGCATTTGAGGTTTATACAAGC 58 2456459 2456477 CAATTCGTTGACCTCGTCG 59 NA Drosophila melanogaster 61 CG10298 FBgn0037432 FBtr0081710 2 1 1 91 3R 2168865 2168937 TGCTTACGGTGACTTATGGT 59 2168991 2169009 CCATTTCACCTTTGGCTGG 59 NA Drosophila melanogaster 61 CG31559 FBgn0051559 FBtr0078616 3 1 1 60 3R 1981912 1981931 GAATAGCCACGTTCTTGCAG 59 1976754 1981892 TCTTTCTCCTTGAAGTTCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 3 2 2 70 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671261 1671279 AACACCACTGTAGAGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14669 FBgn0037326 FBtr0078679 3 1 1 112 3R 1280549 1280571 GATCAGATCTTGGACAGTTTCAG 59 1280642 1281040 GAAATGTCCTTGAGCTCCTG 58 NA Drosophila melanogaster 61 CG1124 FBgn0037290 FBtr0078841 3 1 1 104 3R 792865 792884 CAATGTCATAGGAACGACCC 58 792950 793351 AGAGGGCAGCTGAATATCAG 59 NA Drosophila melanogaster 61 CG42574 FBgn0260794 FBtr0301437 1 1 1 83 3R 614711 614729 CAGATGACTAAGGCCAAGG 57 614583 614664 CAAATCCAACATGCGACTG 57 NA Drosophila melanogaster 61 CG34425 FBgn0085454 FBtr0112726 1 1 1 60 3R 331942 331963 CAGACCACTTTAACTTCATCAC 57 331903 331922 AAACCGATTTGGGTATGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9855 FBgn0037242 FBtr0078950 3 1 1 123 3R 222519 222595 ATTTATCCGAACCTCAGCCA 59 222415 222433 ATATGGTGGGCAGCAAGAG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0078899,FBtr0301771,FBtr0300790,FBtr0301772,FBtr0300789,FBtr0113343,FBtr0113338,FBtr0078900,FBtr0078898,FBtr0301768,FBtr0301769,FBtr0113341,FBtr0078901,FBtr0113340,FBtr0078897 3 17 21 185 3R 108544 109953 GAACTAAGGCCAGCTTACC 57 110100 110120 GCACTTAATTGGTTTCCAACC 58 NA InUTR Drosophila melanogaster 61 TwdlG FBgn0037225 FBtr0078982 3 1 1 81 3R 74727 74921 CCATTCAAGCTCAATATGACCA 58 74667 74685 CCAATCACGGATGTAACGG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1397 FBgn0083044 FBtr0113606 1 1 1 65 3L 5756022 5756040 TGCCAGAACAAATTCCAGG 58 5755975 5755993 ATGTTCAGACAGAGGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2622 FBgn0086670 FBtr0091635 3 1 1 60 3L 1488974 1488998 AGAGATACTTCCGGATAATCATAGG 59 1489014 1489034 GGCCATGAAATAGACTATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 1 1 1 72 3L 23119496 23119830 TATGGCACTCCTTCTGGAC 58 23119865 23119884 AGATAAATGAGCAGATGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148,FBtr0078565 3 2 2 80 3L 23006394 23006876 TCAAGTTGAATGGTATCGCA 57 23006918 23006937 ACATTCTCCGAATTACCACC 57 NA Drosophila melanogaster 61 CG33766 FBgn0053766 FBtr0091767 2 1 1 160 3L 22638774 22638866 AATCGTGCCAATACCTACGA 59 22638989 22639007 TATCCATTGTGACACCCGG 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914,FBtr0078496 1 2 2 80 3L 22275925 22276014 CAGCTATGGTAGCCTGAGG 59 22276058 22276076 TCCCAGTCGTACTTCTCCA 59 NA Drosophila melanogaster 61 CG14562 FBgn0037142 FBtr0078472 2 1 1 119 3L 21941697 21941718 CCAATTTAATCGGCATTGACAG 58 21941798 21941961 TAAACCCGCAAGACTTTCC 58 NA Drosophila melanogaster 61 Syn1 FBgn0037130 FBtr0078450 3 1 2 118 3L 21753606 21754067 GAACCTTGGGAAGCAATCAC 59 21753507 21753525 GATATTCATGCCCTGCAGC 59 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 1 2 2 80 3L 21605218 21605236 AAGTACAGCGTCGACTCTC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058,FBtr0300057 3 2 2 100 3L 21568622 21568642 CTGCTGGCTTTATTCAGAAGG 59 21568701 21568781 GATGTACATCCAGTATTTGGCA 58 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 1 2 2 109 3L 21513428 21513511 CTTACGGACAGGTTTACAAGG 58 21513582 21513600 ACGAACAGCTGTAATGGGA 59 NA Drosophila melanogaster 61 CG6951 FBgn0036959 FBtr0074828,FBtr0074829 3 2 2 80 3L 20237608 20237627 GAGTTTGTCTGGAACTCGAC 58 20237666 20238048 GATATGCCCACCTGTATAATGAG 58 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 3 1 1 63 3L 19807934 19807952 TCCTCACTGGAACAGTGTC 59 19807819 19807907 TCTTAACGGGCAACATGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 2 4 4 81 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634304 19635000 CTTATAAGCAACACCCTTCACG 59 NA Drosophila melanogaster 61 Taf6 FBgn0010417 FBtr0074941 1 1 1 95 3L 19593058 19593076 GTTCAGAACAACTTGGCGT 59 19593133 19593215 TTCGTGGAGGTATTTCTCCAG 59 NA Drosophila melanogaster 61 Shal FBgn0005564 FBtr0112853 1 1 2 83 3L 19565442 19565460 CAACTATCGGGACGAGGAC 59 19562900 19565397 ACAAATTCTCGATCCGTTGTC 59 NA Drosophila melanogaster 61 Ir75d FBgn0036829 FBtr0075073 1 1 1 80 3L 18901884 18902135 CATTCGAAGGCAACTACGC 59 18901822 18901840 TTGGGCTTCTGAGGAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG3902 FBgn0036824 FBtr0075076 1 1 1 80 3L 18887924 18891051 GGAGACTGTTGCCAAACTG 59 18887862 18887881 GAGGGATCGAATTTGTGCTC 59 NA Nonspecific Drosophila melanogaster 61 CG11637 FBgn0036822 FBtr0075065 1 1 1 80 3L 18885729 18885850 GTAGCTGAAGGCCTAATGGA 59 18885890 18885911 CTTGTCGTTATAGGTGATCAGG 58 NA Drosophila melanogaster 61 CG6865 FBgn0036817 FBtr0075060 1 1 1 113 3L 18857590 18857608 AGTACCTCAACGGGATTGG 59 18857685 18858016 CCAGGAGGGCTATATCGTG 59 NA Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075057,FBtr0075056 2 2 2 62 3L 18814759 18814778 TTGTGACTCCCGATGAAGAG 59 18814801 18814821 GCACATTGTCTGAATCTTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6893 FBgn0036807 FBtr0114373 2 1 1 82 3L 18687416 18687435 GGATAGGACAACATCCAGCA 59 18687480 18687552 ACCGTGGACGTATTATCGT 58 NA InUTR Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 1 3 10 81 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926098 16926397 GCTGCTTCTGAATTTCGAC 57 NA Nonspecific Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175,FBtr0075302,FBtr0075301,FBtr0075300 3 4 10 143 3L 16928398 16928600 CTCTTGGTTCTTGTTCAAGGA 58 16926442 16926460 CCAGAAGCAGTGTTGAGAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323 3 1 2 199 3L 16766733 16766826 CTAAGTCAAGAATTCTCGCAGAG 59 16766985 16767003 CTTGGAGGTCTGTGGACTG 59 NA InUTR Drosophila melanogaster 61 Cpr72Eb FBgn0036618 FBtr0075383 1 1 1 60 3L 16358684 16358702 CGTGTACAACTACCACACC 58 16358726 16358744 TACTGGCAGGTAGTTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13069 FBgn0040798 FBtr0075463 2 1 1 72 3L 16258703 16258722 CTATGTGGCTTCTCCCTACG 59 16258757 16258775 AGATGCCACATACGGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17029 FBgn0036551 FBtr0075514 1 1 1 80 3L 15970644 15971061 AAAGTGACGACGATCAAGC 58 15971104 15971123 CACATTCTTGTCCCTCACTC 58 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 1 4 4 88 3L 15964323 15964401 CATTCTAGGTCGAGGCTCC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Eig71Ej FBgn0014850 FBtr0075582 2 1 1 66 3L 15653889 15653908 GTAAGGCGTTGTGATATGCA 58 15653778 15653796 CATTCTCGCAATCCAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654,FBtr0075653 3 2 2 129 3L 15121346 15121469 TAGCTCCACTTGCAGATCC 59 15121235 15121255 ACCATTAAACGGAGGTATTCG 58 NA Drosophila melanogaster 61 CG13477 FBgn0036438 FBtr0075685 3 1 1 60 3L 14684691 14684711 CTGAACCGAATCATTAATCGC 57 14684733 14684751 TCCTCTTCATCTGGACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0100435,FBtr0075812 2 2 2 90 3L 13501638 13502161 TCCCATTGCTCAAATAGTCG 58 13502214 13502232 GGCGATACCTATACCACCA 58 NA Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075896,FBtr0075895 3 2 2 111 3L 13013916 13014181 ACATTTCGGGCTTCTTCCT 59 13013823 13013842 GATATGAATGGTGCGCTGAG 59 NA Drosophila melanogaster 61 CG32117 FBgn0052117 FBtr0075905 2 1 1 60 3L 12896295 12896315 CATCCAAACCGAAGATCTCTG 58 12896255 12896276 GGTTGAATGCGTAAACAATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 3 1 1 92 3L 12768757 12768777 GATTAGTCCTACACAAAGCCA 57 12768631 12768703 TCTCTTCCTTCGTTCTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 snRNP69D FBgn0016940 FBtr0075952 2 1 1 109 3L 12727061 12727603 GATTCCTTATGAAGCTAAGTCACG 59 12726975 12726994 CTTCAGGTGAGTGTTCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 1 4 4 80 3L 12558130 12564650 AAGCCAGAGAAGCAATTAATCG 59 12558071 12558090 GACTATCCACTCCTTTGCCT 59 NA Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0112436,FBtr0300028 3 2 2 86 3L 12527190 12527208 ATTCGTTGGATTCGTGTCC 58 12527257 12527276 TTCTCAGTGTTAACCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5883 FBgn0036225 FBtr0076067 3 1 1 87 3L 11937810 11937897 AGGACTTCCTAGTTCTTTGGT 58 11937743 11937761 GGTGGCGTTTAAGTAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34420 FBgn0085449 FBtr0112716 2 1 1 92 3L 11847412 11847430 CACAAATCACTGTGGTCGC 59 11845694 11847357 ATATGCTGACCACACTTGGA 59 NA Drosophila melanogaster 61 CG14130 FBgn0036210 FBtr0076031 2 1 1 132 3L 11809145 11809228 TGGATAGCACGAGATACTGC 59 11809323 11809341 GAATTCGGATCCGTTGCAG 59 NA Drosophila melanogaster 61 CG33270 FBgn0053270 FBtr0076149 1 1 1 60 3L 11571444 11571462 CATTCCCAAGAGGAAGTGC 58 11571402 11571420 GGTCACAATCACGATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7551 FBgn0036161 FBtr0076176 3 1 1 60 3L 11451932 11451953 CATCATTATCGACAACTGTCCA 58 11451972 11451992 GAGTATCACGGATGAGAAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 1 2 2 75 3L 11438776 11438858 AGATACTTTCTGCAGTCCCG 59 11438896 11438914 CTGATTCAGAACCACCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7573 FBgn0036153 FBtr0076171 1 1 1 211 3L 11304959 11304977 TCAGATCGGCATGAGTGTG 59 11305152 11305243 GTTTATCCTTGGAGGCCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG6175 FBgn0036152 FBtr0076183 1 1 1 88 3L 11286944 11286962 GATACCACTCGCGAATTGG 58 11284196 11286892 GAAGAGGAACGTGTCACAG 58 NA Drosophila melanogaster 61 As FBgn0061469 FBtr0076186 2 1 1 80 3L 11202078 11202098 ATTTACATGCGTACGGATTGG 59 11201956 11202038 ACTGTTATTGGTATTGGTGGC 58 NA Drosophila melanogaster 61 Alg10 FBgn0052076 FBtr0076217 1 1 1 80 3L 11158266 11158285 GTAATCGACGAGGAGTTCCA 59 11158326 11158403 TGTTATCTTGGGATCCCACAC 59 NA Drosophila melanogaster 61 CG7839 FBgn0036124 FBtr0076207 1 1 1 85 3L 11071417 11071509 CAGAGTCACGATATGTCCTCTC 59 11071555 11071573 CCCTGACCCTTTACCTTGG 59 NA Drosophila melanogaster 61 CG32069 FBgn0052069 FBtr0076241 3 1 1 118 3L 11055608 11055629 GACACTGATTGAATCTTCACTC 57 11055445 11055463 TAGGTGCTCCAAAGTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6463 FBgn0047038 FBtr0076276 1 1 1 80 3L 10686961 10687108 ATCATTAAGGCGTCCACAG 57 10686899 10686917 CTTGCCATACAGAGCACTC 58 NA Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 3 2 2 109 3L 10635601 10635619 CATCCCATCTGCTCAAGTG 58 10635690 10635812 CGTTAAGAACATCATCTCCCT 57 NA Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 3 2 2 81 3L 10630670 10630750 ATAAGAAACTGGGACGAGC 57 10630607 10630625 GATCGTAGGGTTTAGCCTG 57 NA Drosophila melanogaster 61 Gem3 FBgn0011802 FBtr0076292 2 1 1 107 3L 10455966 10455984 CAACGAAGATTCAGGCAGC 59 10455819 10455842 CGACGGCTATAACATAGATTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0100386,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 1 8 8 115 3L 9825860 9825878 ATTTGAAATGGCCACCACC 59 9825956 9826036 TGTGTAGTCCCGGTTAACTC 59 NA Drosophila melanogaster 61 CG6761 FBgn0036031 FBtr0076414 3 1 1 89 3L 9694550 9694568 GGTATCTCCCTAACGCCAC 59 9694426 9694497 ACGATGGTTGGTCACTCTC 59 NA Drosophila melanogaster 61 CG3222 FBgn0036014 FBtr0076379 1 1 1 60 3L 9592630 9592651 TGTTCAATAGTAAGACCTGCTG 58 9592670 9592690 TACATGAATTGATGGAGCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir67a FBgn0036010 FBtr0076422 2 1 1 86 3L 9536289 9536437 ACCCATTGTACAAGAGTGGT 59 9536222 9536240 TTTCCGCTAACCATCACCA 59 NA Drosophila melanogaster 61 Hsp26 FBgn0001225 FBtr0076496 1 1 1 61 3L 9370014 9370032 AGGATGGATTCCAGGTGTG 59 9369971 9369989 CTTCACGTTGAGCTCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Glu-RIB FBgn0028431 FBtr0076431 1 1 1 80 3L 9259597 9259618 CAAATACTCATCCAACATGTGC 58 9259659 9260111 GTCCATGACCAAACCACTC 58 NA Nonspecific Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534,FBtr0076535 1 2 3 129 3L 9163797 9164102 AATTACGGTGGACCTCCTG 59 9156023 9156041 CTAAACGAGGATCGGTCCA 58 NA Drosophila melanogaster 61 CG5144 FBgn0035957 FBtr0076523 2 1 1 60 3L 9040904 9040925 ATATAAGGTGTTTGCCGATCTC 58 9040941 9040964 CTTGAAGCACTTATGGTATTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 2 5 5 82 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986077 8986096 TGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 2 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964099 8964119 GACAAGTTCCTGAATTTGCGA 59 NA Drosophila melanogaster 61 CG32023 FBgn0052023 FBtr0076588 1 1 1 60 3L 8797258 8797276 GCAGTATACTCAGCTCCTG 57 8797160 8797183 GACTGCCATATAGGATATGATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5978 FBgn0035916 FBtr0076648 2 1 1 127 3L 8616640 8616716 CATTTAATGGTGTGCCCGA 58 8616531 8616549 CTGTTTATACAGGGCTCGC 58 NA Drosophila melanogaster 61 se FBgn0086348 FBtr0076623 2 1 1 70 3L 8514300 8514324 TGGAGAGGATTATAACTACGATCAG 59 8514409 8514427 CTCGTTTCATGCGTTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7112 FBgn0035879 FBtr0113153,FBtr0076605 2 2 2 80 3L 8343181 8343259 TCCTTCATATGCCTGAGGAG 58 8343301 8343320 CTTTGTAGAGATCACGGAGC 58 NA Drosophila melanogaster 61 eIF4E-3 FBgn0035860 FBtr0076701 2 1 1 80 3L 8223291 8223369 GCTAATAAGCTATCCCTTTGGA 57 8223410 8223428 CAGCTCCTTTATCTGCCTG 58 NA Drosophila melanogaster 61 CG7375 FBgn0035853 FBtr0076722 3 1 1 97 3L 8189972 8190250 CTATTCTTGGAACCCAATCCC 58 8189895 8189915 GCCTTCTTTACATTGTTCTCG 57 NA Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 3 1 1 126 3L 8185620 8185638 CTTGGAGTACGATCAGCTG 57 8185425 8185533 CTCATCATTTGTCGTCTTATCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 2 1 1 125 3L 8185619 8185637 TTGGAGTACGATCAGCTGG 59 8185425 8185534 CTCATCATTTGTCGTCTTATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7979 FBgn0035848 FBtr0076690 3 1 1 93 3L 8174949 8174969 CATGTAAACCCTATTGGACCG 58 8175024 8175329 GCACTTTCTCCTGTTTGGC 59 NA Drosophila melanogaster 61 CG33276 FBgn0053276 FBtr0114530 1 1 1 81 3L 7633159 7633237 AAGGAGATACTGTGCGACC 59 7633040 7633058 AGCTCGTAGTCCAGTTCAC 59 NA Drosophila melanogaster 61 BBS1 FBgn0035741 FBtr0076912 3 1 1 81 3L 7120371 7120390 TGGATAAGCCCAAGAAGAGC 59 7120431 7120534 AAACTTCCGTAGGTTGATTTGG 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906,FBtr0076905 1 3 4 84 3L 7060850 7060868 TAATTGACCCGGACGACTC 59 7061140 7061158 TAGCTACGCACAATACGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14910 FBgn0035700 FBtr0076965 3 1 1 64 3L 6454910 6454928 AGCATTGGCTATAATCCGC 58 6454956 6454974 AAGGTGTCCACTTCGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13297 FBgn0035685 FBtr0077020 1 1 1 80 3L 6150237 6150256 TATCAAGCTGGGAGATGTCG 59 6149985 6150196 GGAAGAGTGTAGTTGAACTCG 58 NA Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299609,FBtr0299610 3 2 2 87 3L 6059926 6059944 CCTTGATACCCGAACAGCA 59 6062555 6062573 GTCATGGGTATGGAAAGCG 58 NA DesignNoJunction Drosophila melanogaster 61 spo FBgn0003486 FBtr0077130 3 1 1 60 3L 5584353 5584373 ACGATTATCTTCATGCTGGAG 58 5584313 5584333 TTACTAGATTTCCAACCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10674 FBgn0035592 FBtr0077181 1 1 1 140 3L 5129100 5129186 ATGATGAAGCTCAAGTGGTG 58 5128979 5128997 GAGGTAGGACATCACCACC 59 NA Drosophila melanogaster 61 CG32249 FBgn0052249 FBtr0073303 3 1 1 188 3L 4469068 4470100 ATTTCTTTCTGGCTTGGCT 57 4470252 4470270 TAAACGGGAACCACTTGTG 58 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 1 3 3 62 3L 4262983 4263002 AAATGAATCCCTTGATCGGG 58 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14977 FBgn0035469 FBtr0073158 2 1 1 80 3L 3897073 3897152 TACTAAATCTCACAGAGACCATCG 59 3897190 3897209 GATGCTCGTAATCGATGGTG 59 NA Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107 3 1 2 111 3L 3198856 3199001 GGCTGAAAGTGAGATTGTGC 59 3198764 3198782 TACATTGCCACGCATTGTC 59 NA InUTR Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 3 3 3 83 3L 3119726 3119808 TTAAGAGATGGCGTCCGTG 59 3119661 3119679 GAACTTCTGGCACATCTGC 59 NA Drosophila melanogaster 61 Or63a FBgn0035382 FBtr0301497,FBtr0072977 3 2 2 80 3L 2961807 2961826 ATCCGACTCTCCTATACGGT 59 2961866 2961946 GACAATTGTCCAGATTCTGAGC 59 NA Drosophila melanogaster 61 CG15877 FBgn0035337 FBtr0072899 1 1 1 60 3L 2377212 2377286 GGTTCCAACAGATAAACCCG 59 2377171 2377190 CTTAGTGGCCGATACTTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 ACXD FBgn0040507 FBtr0072874 1 1 1 80 3L 2242258 2242339 CCAAAGTGGATTACAACTGGA 58 2242379 2242399 GCACTTTAATGGTGTCATTGG 58 NA Drosophila melanogaster 61 RabX5 FBgn0035255 FBtr0301528 3 1 1 80 3L 1669612 1669692 CAACTACAGTCTGGAAATGTGG 59 1669553 1669572 CTCGCATTGCGATAATAGGC 59 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 3 4 4 81 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326126 1326210 CAATGTAGGTATAGATCAGGTCCT 59 NA Drosophila melanogaster 61 CG9149 FBgn0035203 FBtr0072667 1 1 1 80 3L 1303024 1303042 ATAACACCTGTTCCTTGCC 57 1303086 1303198 ATTGAAGCTACCAATGGGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Rac1 FBgn0010333 FBtr0072730 1 1 1 109 3L 1302223 1302241 GTGTTCGACAACTACTCGG 58 1302132 1302150 TAAGACAGTGGCCTCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 1 2 2 80 3L 1285039 1285058 TCTTCCAGATACTCTACCGC 58 1285100 1287940 GACTGTCAACTAGCAGATGG 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 3 3 3 81 3L 1255033 1255494 AAGGGTATCGAGGTTTGCT 58 1255539 1255557 ACTTGGCCTTACTTCCCAG 59 NA Nonspecific Drosophila melanogaster 61 mwh FBgn0260963 FBtr0072632 3 1 1 81 3L 1230142 1230160 CAGTTTGGCTCCATTACGG 58 1230204 1230276 CAAACTCCTGAACGAAGCTG 59 NA Drosophila melanogaster 61 LysP FBgn0004429 FBtr0072633 3 1 1 60 3L 1218647 1218666 TGATTTGTGCTCTGACTCTC 57 1218606 1218625 GAACACCTATCCATCGTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 3 2 2 72 3L 897908 897926 AGGAATGGCCTACGTACAC 59 897962 898035 ATAAGTGTCATCATCGGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13901 FBgn0035164 FBtr0072596 1 1 1 60 3L 837090 837108 AGAAGAACATTGAGTGGCG 58 837048 837066 GTTACGCTGTATGTGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl9 FBgn0035131 FBtr0072574 1 1 1 80 3L 330205 330288 GCCATTAATGTGGAATCAAGTC 58 330146 330165 TAGATCGCCTTTCTCATCGA 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0072543,FBtr0301817 2 6 6 80 3L 354438 354511 TATCACCATATGACTGCACCC 59 354552 354571 CCATGTTTACGTAGTTGGCG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-G1083c FBgn0082933 FBtr0113533 1 1 1 60 2R 20072854 20072873 GATGAGCATTAACTTTCGCC 57 20072894 20072914 CAATCTCGCATTCAACATGAG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841c FBgn0083017 FBtr0113522 2 1 1 108 2R 17218090 17218108 CAAATGCACTCTGTGTCAC 57 17218180 17218198 GTAATCACCCTGATACGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33425 FBgn0053425 FBtr0086417 1 1 1 60 2R 15627169 15627187 ATACATCGGTTCTCGTCCG 59 15627127 15627145 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30223 FBgn0050223 FBtr0086498 1 1 1 60 2R 15393890 15393908 TCGTCTAGTGGTTAGGACC 57 15393848 15393866 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30237 FBgn0050237 FBtr0087198 1 1 1 60 2R 12095189 12095210 GTTCCATGGTGTAATGGTTAGC 59 12095150 12095169 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42646 FBgn0261429 FBtr0302350 1 1 1 83 2R 1250989 1251782 GTTTGAGTTCTGGATGCCC 58 1251829 1251847 GATGGAGCTGTCCTAGTCG 59 NA Drosophila melanogaster 61 CG33680 FBgn0053680 FBtr0091660 2 1 1 101 2R 21137248 21137266 CCCATTAGAACCGTTGTCC 58 21137104 21137183 CCTGTATAGTTCCCTCCGT 57 NA Drosophila melanogaster 61 CG3770 FBgn0035085 FBtr0072393 1 1 1 80 2R 20833847 20833921 GTAGCATAGGAGTTTCATTCTACTG 59 20833958 20833977 CTGCCTTTAGGCTTATACCG 58 NA Drosophila melanogaster 61 CG15861 FBgn0035084 FBtr0072410 2 1 1 89 2R 20831281 20831356 ATCTGTGATCACAACTGCG 58 20831210 20831228 GTTGTGAGCATAATGGTGC 57 NA Drosophila melanogaster 61 CG16912 FBgn0035064 FBtr0072429 2 1 1 116 2R 20670497 20670517 CAATCTAAAGGCTATCGAGCA 58 20670349 20670422 GCATTGTTGACGATTATTAGGG 58 NA Drosophila melanogaster 61 Mmp1 FBgn0035049 FBtr0273264,FBtr0273263 1 2 2 84 2R 20569794 20569812 CATAGTCGTAGGCACCCTG 59 20564114 20569747 CAGGTAGATCTCTGCCTGTG 59 NA Drosophila melanogaster 61 CG11413 FBgn0035022 FBtr0072305 2 1 1 128 2R 20424116 20424134 GACATCATGGACACCATGG 58 20424225 20424244 CCGAGTGATGAACTTGTCAC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG4612 FBgn0035016 FBtr0072346 1 1 1 99 2R 20412364 20412387 GAATCTGTATGTGAAGAACCTCAG 59 20412057 20412306 CAGCATGAGCTTGTGACTG 59 NA Drosophila melanogaster 61 Pros28.1B FBgn0017556 FBtr0072350 1 1 1 80 2R 20389123 20389322 ATAACCCGATACATAGCCCA 58 20389062 20389080 AACCAGACAGGACAATCCA 58 NA Drosophila melanogaster 61 tamo FBgn0041582 FBtr0072281,FBtr0072282 3 2 2 88 2R 20017595 20017613 TAGCCTTCGAGACCATCAG 58 20017460 20017544 TCCCGAATAGGTCTTGAGAG 58 NA Drosophila melanogaster 61 CG5549 FBgn0034911 FBtr0301162 1 1 1 80 2R 19718087 19718105 CTTCTACATGTTCGCCTCG 58 19718147 19721373 GAGAAGCAATACTTTGTGCTC 57 NA Drosophila melanogaster 61 l(2)efl FBgn0011296 FBtr0072101,FBtr0072100 3 2 2 112 2R 19572890 19573001 AAGATGTCCGTAGTGCCAC 59 19572796 19572814 TCATCCCTCTTCAGTCCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072104 1 1 4 135 2R 19496194 19501997 CTTCCTGGTTGCTGTAAGG 58 19496077 19496095 GAAAGAGGTCCGTCTTCAC 57 NA InUTR Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112 2 1 2 181 2R 19435391 19435517 GCTGACGATAGTGCATCAG 58 19435228 19435249 TGCACTTAGTGAATAACTGACG 58 NA InUTR Drosophila melanogaster 61 CG13557 FBgn0034867 FBtr0072019 1 1 1 89 2R 19363505 19363808 AGTCGCTATGGCAACAGAG 59 19363434 19363452 AGGGATACACCAATCTGGC 59 NA Drosophila melanogaster 61 yellow-d2 FBgn0034856 FBtr0072012 3 1 1 143 2R 19268966 19269038 TCTACTACAAGCATGGCGA 58 19269145 19269163 ACTCGTAGCTGGGATAAGC 59 NA Drosophila melanogaster 61 Gr59d FBgn0041236 FBtr0071976 2 1 1 60 2R 18991681 18991699 GGTCTGGATCATCGATTGG 57 18991583 18991601 GATTCCGCACCAAGTTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Gr59b FBgn0045482 FBtr0071965 2 1 1 60 2R 18970639 18970657 ACTCGTGGAGTGAAGTTCG 59 18970739 18970762 CTATTCGCATAGATCACATAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13542 FBgn0034809 FBtr0071987 2 1 1 89 2R 18897217 18897235 TGTCCATCAATCGGAGGAG 58 18896795 18897164 AAACGGCATTCGAATGTGG 59 NA Drosophila melanogaster 61 CG3831 FBgn0034804 FBtr0071993 1 1 1 139 2R 18828244 18828263 CATCGACATAATGCGGAGAG 58 18828039 18828142 TATGGACGGAGGAACTTCC 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 3 10 13 139 2R 18814847 18814866 CTGGCTACCGTTCTACTACG 59 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 Nup214 FBgn0010660 FBtr0071996 3 1 1 80 2R 18810095 18810166 CTCCTCAAAGGCATTGCAG 59 18810033 18810053 TTGTTCATTGAGCTCTTGGAG 58 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 2 3 3 118 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631799 18631817 AAGTCGTTCGACTACGTGG 59 NA Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 1 1 1 74 2R 18535625 18535703 TTTGTGACCTTCTGCTGCT 59 18535569 18535588 GCAGTAATGACTTCGATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840,FBtr0071841 1 2 2 60 2R 18314193 18314213 GCATGATGATTGACACAAGTG 58 18314098 18314116 TTCAACTGATCCGATGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 qkr58E-2 FBgn0022985 FBtr0071828 2 1 1 141 2R 18303861 18303940 AATTGACGAAGCTCTGGAG 57 18304042 18304063 CACATAGTTGAACTTCTTGTCC 57 NA Drosophila melanogaster 61 CG11291 FBgn0034713 FBtr0071773 1 1 1 99 2R 18099602 18099620 TTTGGGCAAACCGAATCAG 59 18099680 18099755 GTCTGATTTAAGCGAGTTTCCA 59 NA Drosophila melanogaster 61 CG3264 FBgn0034712 FBtr0071781 1 1 1 83 2R 18097123 18097141 CTCCGAACTCACTGAGGTG 59 18097000 18097079 ATTAGACCACCTTCAATGAACG 58 NA Drosophila melanogaster 61 Gr58c FBgn0041237 FBtr0071727 1 1 1 79 2R 17865178 17865196 TATTCGGGAAGGCAATGCA 59 17865295 17865314 CGATTCATGTAGAGCAGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15673 FBgn0034639 FBtr0300355 1 1 1 80 2R 17497452 17500296 TGATAGGTGTAATCATCGCCA 59 17497392 17497410 ACTCGTGGAGAACGTTCTC 59 NA Drosophila melanogaster 61 CG9822 FBgn0034623 FBtr0071612 2 1 1 145 2R 17235327 17235347 AGTACGGTAGATTTCAAACGG 58 17235145 17235223 GCTTTCATGGAATTTACCATCG 58 NA Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 1 2 2 80 2R 16764062 16764082 TTAATTTATGGCGATCACGCG 59 16764123 16764775 AAGCACCATAATTTCACCGG 59 NA Drosophila melanogaster 61 sktl FBgn0016984 FBtr0071563 1 1 1 93 2R 16717886 16719296 ATTTCTGTAGAGCGGAAATCC 58 16717813 16717833 CTGATCCTTTAGCCTATCCTG 57 NA InUTR Drosophila melanogaster 61 Ir56b FBgn0034456 FBtr0086465 2 1 1 120 2R 15396394 15396412 CATCGTTATCCACGACTCG 58 15396547 15396565 GAAGAACAACCAGGCATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG16926 FBgn0040732 FBtr0086499 1 1 1 80 2R 15388482 15388500 TGGAATACAAGCCCATTGC 58 15388351 15388441 GGCCATCTTAACAACACTTAGG 59 NA Drosophila melanogaster 61 Spt5 FBgn0040273 FBtr0086531 3 1 1 81 2R 15327623 15327702 GATATGGTGCAACTGGATTCC 59 15327744 15327763 CATTCATGCCCAAGACATGG 59 NA Drosophila melanogaster 61 Dpt FBgn0004240 FBtr0086620 2 1 1 69 2R 14753363 14753381 CTTTGGCTTATCCGATGCC 59 14753414 14753432 AGATTGAGTGGGTACTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 2 2 2 94 2R 14686294 14686595 GATTTCTTTAATTCCGAGCGCT 59 14686221 14686239 ACTTGGGTCACGATGTAGC 59 NA Drosophila melanogaster 61 IM2 FBgn0025583 FBtr0086664 2 1 1 76 2R 14274203 14274221 TCTTTGTGTTCGGTCTGCT 59 14274321 14274341 CCCGTTGATTACCACATTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0110966,FBtr0110965,FBtr0086782 2 4 4 127 2R 14021471 14021489 ATGCACTCTTACGGAGACG 59 14020604 14021380 AAACTTTGGCCATCCTTGG 58 NA Drosophila melanogaster 61 CG14495 FBgn0034293 FBtr0086810 3 1 1 91 2R 13936743 13936847 GCATCAATAAGAACGGAATCC 57 13936672 13936690 ATAGTCCTCGTGAAGTCGT 57 NA Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 2 1 1 68 2R 13557816 13557892 TATCAGGAGTGCGTCAAGC 59 13557924 13557942 GTACTCAGATCCGACCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 lack FBgn0029006 FBtr0086833 3 1 1 96 2R 13490251 13490269 ATAGATGTCAACGACTGGC 57 13490329 13490422 TATAGGACTCGACCACCTG 57 NA Drosophila melanogaster 61 RhoGAP54D FBgn0034249 FBtr0086900,FBtr0086901 1 2 2 80 2R 13477350 13477422 CTGGAGAAGAATCTCACCCA 58 13477289 13477307 GATGTGCATCCGAAGTTCG 59 NA Drosophila melanogaster 61 CG6484 FBgn0034247 FBtr0086903 3 1 1 80 2R 13470797 13470815 GATGCCGATATCGATGACG 58 13470319 13470753 CAGAATGTTGACCTGTGGC 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603,FBtr0273447,FBtr0273446,FBtr0086949,FBtr0086948,FBtr0086950,FBtr0300605 1 7 8 105 2R 13414810 13414888 AGGAGAAGGAGGATTTGGA 57 13414723 13414741 TACTTGTCCAAATCCACGG 57 NA Drosophila melanogaster 61 CG4802 FBgn0034215 FBtr0086916 1 1 1 146 2R 13315590 13315682 CCGGTCAAGATTGGTATTATTGG 59 13315788 13315806 GAGTACGCACTGTACTCCA 58 NA Drosophila melanogaster 61 CG6550 FBgn0034214 FBtr0086961 1 1 1 80 2R 13313867 13313947 TTCCTGTACAGAGTGGTAGTG 58 13313807 13313825 CCACAACGTGCTCAAAGTC 59 NA Drosophila melanogaster 61 CG30457 FBgn0050457 FBtr0086998 2 1 1 83 2R 13048215 13048296 TCCACAATGAAATTCCTGGT 57 13048151 13048169 ATAGTTGTAGCCCGACAGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG10956 FBgn0034195 FBtr0110777 2 1 1 80 2R 13010762 13010784 GACGGAGTTATTCATGTAGTCAC 59 13010643 13010723 ACTACCATTGCCAACATCTG 58 NA Drosophila melanogaster 61 CG8910 FBgn0025833 FBtr0087071 3 1 1 109 2R 12764588 12764606 CTGATGGACATCCAGAACC 57 12764428 12764516 GTGGAGTAACGAAATCTGGG 58 NA Drosophila melanogaster 61 CG15919 FBgn0040743 FBtr0087032 3 1 1 151 2R 12680222 12680243 CTGATGCTGACAGTAATATTGG 57 12680446 12680464 CAGTACTTTACCCAGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5267 FBgn0034154 FBtr0087021 2 1 1 60 2R 12642916 12642937 AATAGGTGAAGAAATAGCCCTC 57 12642954 12642976 CTGCTTGATATACTTCTCCTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp53D FBgn0259967 FBtr0300312 2 1 1 69 2R 12632224 12632243 CCAAACGTTAGATGGTTTGG 57 12632174 12632192 CACTTCATTCGGCTGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4439 FBgn0034132 FBtr0087087 3 1 1 82 2R 12378857 12378878 TTCTACACTGGGATTATTCAGG 57 12378921 12379018 CACTCTTGCATCTCACCTG 58 NA Drosophila melanogaster 61 CG4409 FBgn0034128 FBtr0113085 2 1 1 112 2R 12331525 12331543 GTACGCCCTATTCTTCGAC 57 12331619 12332183 GCATTGAGTTCTGCAAACC 57 NA Drosophila melanogaster 61 CG15711 FBgn0034122 FBtr0087167 2 1 1 60 2R 12251234 12251255 AACTGAATTTCAACGGCTATGG 59 12251195 12251214 AATAGTTCCTCGGTGACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 1 2 2 80 2R 12229398 12229418 CAGCTCCTCTAATTATGTCCA 57 12229277 12229356 CAATAACCGCACGATTCTG 57 NA Drosophila melanogaster 61 CG8443 FBgn0034087 FBtr0087242 1 1 1 80 2R 12079663 12079682 TGTACAGAGCTCGCTATCTG 59 12079722 12079805 AACTGATGTTGCTATCGATCAG 58 NA Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204 1 1 2 113 2R 11895973 11899464 GAACTACCTAATTACATCAACCAGC 60 11899535 11899553 ACCACAATCCATCCGTAGC 59 NA InUTR Drosophila melanogaster 61 CG33461 FBgn0053461 FBtr0302528 1 1 1 80 2R 11583439 11583458 TACGATCCCAAGGACTTCTC 58 11583496 11583581 GGGTTGGATATGATATGTGTACTC 58 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414,FBtr0087413 1 2 2 80 2R 10924647 10924868 TTGACTGTCCTGTATGCTCC 59 10924911 10924929 GCTTAGTTGCACGGAATCG 59 NA Drosophila melanogaster 61 Lap1 FBgn0033984 FBtr0087407 1 1 1 80 2R 10823924 10823944 ACAATTTGGAGAGCATTCCAC 59 10823983 10824060 TGACAATAAGATTCCGGTTGAG 58 NA Drosophila melanogaster 61 Cyp6a20 FBgn0033980 FBtr0300127 3 1 1 84 2R 10770647 10770668 GTCCTGAAACAACATAATGGGA 58 10770711 10770859 TCATGGTCTCATCAATGACCT 59 NA Drosophila melanogaster 61 CG12858 FBgn0033958 FBtr0087476 2 1 1 112 2R 10631361 10631379 ATGAACTACGGCATTGAGC 58 10631205 10631288 TCTGGATATAGATTGGGATCCA 57 NA Drosophila melanogaster 61 Prosap FBgn0040752 FBtr0087601 3 1 1 80 2R 9956771 9956791 TGCTAGAATGCTTCTCTTTCG 58 9956406 9956729 ATAACAGCCACCTGGTAGG 58 NA Drosophila melanogaster 61 stj FBgn0261041 FBtr0087631 2 1 1 80 2R 9701619 9701639 TTGACATGATTGAAGTCGAGC 59 9701678 9701757 AATCTCTTATCGTCATCAGCAC 58 NA Drosophila melanogaster 61 CG18368 FBgn0033864 FBtr0087627 1 1 1 60 2R 9558195 9558213 GATCAGCATCGCAGTACCT 59 9558237 9558255 TACCCTTTCCCGTAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4630 FBgn0033809 FBtr0087765 1 1 1 88 2R 9103755 9104117 TTACACTAGGTGCCAACTG 57 9103685 9103703 GAACGTGTAGATGACTGCA 57 NA Drosophila melanogaster 61 CG33137 FBgn0053137 FBtr0087733 3 1 1 100 2R 9062699 9062905 ATGACAAGCGCTTATGCTG 59 9062967 9062987 AGTTTGTAGACGATGTTGGGT 59 NA InUTR Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 2 2 2 90 2R 9040862 9040941 CAAGATAAAGACCAACATGGAC 57 9040793 9040811 TAATACAGCCAGCTTTGCC 58 NA Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 1 3 3 100 2R 8822744 8822762 ATAGACAGTATCCGGGTGC 58 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 vg FBgn0003975 FBtr0087785 1 1 1 80 2R 8774674 8774693 ATGTACGGTGCCTACTATCC 58 8774734 8778980 CTGGTTGAACCTCTCATACTG 58 NA Drosophila melanogaster 61 CG8768 FBgn0033769 FBtr0087871 2 1 1 83 2R 8580022 8580099 ATGCTCTGATAGGTGGTGG 58 8579957 8579975 TCACCGTCACATCGTAACC 59 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942,FBtr0087943 3 2 2 114 2R 8402365 8402385 GTCACTACAGTTTGCTGAGTG 59 8401757 8402290 CAGACTTAAGCTGCGATGTC 59 NA InUTR Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 3 2 2 103 2R 8378097 8378116 TACTGGAACCAAGGAGTCAC 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0087919 2 1 2 80 2R 8283001 8283129 ATTATTTCTGGAGTCCTCACAG 57 8283169 8283188 AACCTCATAGTAAATGCCGG 57 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 3 1 3 280 2R 8225540 8226049 TTTCGTGGCAACATACACG 59 8226292 8226311 CATACACTGCGTAATCTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34227 FBgn0085256 FBtr0112420 2 1 1 63 2R 7135697 7135715 GTCTAACACTTCTGGCCCT 59 7135742 7135760 GAATCATCCAAGGCGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7722 FBgn0033574 FBtr0300862 1 1 2 82 2R 6829104 6829201 CGAATGGGTATTTCTGATCATCTG 59 6829045 6829063 CTATGGGACTGGCACTCAG 59 NA InUTR Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088199 1 1 2 68 2R 6797463 6797481 AATGTTCGCTTTGAGCGAG 59 6797578 6797596 TCATCAGCCACGGTTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089727,FBtr0089728 3 3 3 61 2R 6773137 6773155 CGTCTGCTGAAAGTTTCCC 59 6773180 6773198 TTCTCGTACACCAGCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Git FBgn0033539 FBtr0088258 3 1 1 147 2R 6531336 6531356 GTCATGGACCTATACGATGAG 57 6531084 6531164 CCAATTTCTGACGACCCTG 58 NA Drosophila melanogaster 61 trsn FBgn0033528 FBtr0088306 3 1 1 80 2R 6367094 6367176 GCAGTACTACAGATACTCCGA 58 6367034 6367053 TCCAGGTAAATAACCAAGGC 57 NA Drosophila melanogaster 61 Hdc FBgn0005619 FBtr0088333 3 1 1 86 2R 6131341 6131677 TCTATCTCAAGGAAACCAAGGA 58 6131724 6131742 TTACCACCTTAGGCGAGAG 58 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 3 4 4 80 2R 6096141 6096224 GTCAGGACGATCAGATATTACTG 58 6096083 6096102 AGAGATCAAGCAGTCTGGAC 59 NA Drosophila melanogaster 61 CG18445 FBgn0033476 FBtr0088434 1 1 1 122 2R 5927001 5927019 TACGACTACGGATCCTACG 57 5926837 5926915 TTTGGTGAGTTCCTCATCG 57 NA Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 3 2 2 120 2R 5752950 5752968 TCACAACCATACAGCAGGA 58 5752717 5752797 AAGACTCCAAACCACTGCA 59 NA InUTR Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 3 1 1 104 2R 5733917 5733936 GCACGACTGGAATTTCAGTC 59 5733776 5733850 TTCTCTAGCACGTTTGGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672,FBtr0112673 2 4 4 80 2R 5461343 5461363 ATATGTCCAACAACTTAGCCG 58 5461197 5461304 ATGGAGAAGTTAGCATGTTTCC 58 NA Drosophila melanogaster 61 CG12158 FBgn0040775 FBtr0088557 3 1 1 168 2R 5250353 5250374 CAGCATCTTCCTTCTAATTCTG 57 5250152 5250170 GTTCTAGTTGTTCTGCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp4p3 FBgn0033397 FBtr0088593 2 1 1 94 2R 5130633 5130710 ATAGCATTTGTGAGACGGC 58 5130768 5130786 GCATTCTTCGATCTGACGG 58 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0110892,FBtr0088665 1 2 2 80 2R 4909359 4909483 ATAACATTGCTTTCAGGGACC 58 4909299 4909317 GCAGACTGTAGTCATTGCG 59 NA Drosophila melanogaster 61 CG8230 FBgn0027607 FBtr0088674 2 1 1 81 2R 4832554 4832645 CGATCGACTGAGAAAGTTCC 58 4832492 4832515 CACATATGGAATGAAGAACTCCTC 59 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055,FBtr0088815 3 2 2 100 2R 4027821 4027839 TAGTCGTACGGCTGAATGG 59 4027646 4027758 AATGGCATCATGGGTTAGTG 58 NA Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088934 3 1 3 87 2R 3629416 3629522 GTAGACTATTTGCGGGACAC 58 3629348 3629366 ATCGTCGATCTGGTAGACG 58 NA InUTR Drosophila melanogaster 61 CG12042 FBgn0033206 FBtr0088944 3 1 1 60 2R 3554979 3555000 TAAACAATGCGCAAGAGAAGAG 59 3554940 3554959 ATAAACACCCTGGAGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 1 1 1 204 2R 3549605 3549672 GGAATCTATCTGCTCCGAC 57 3549840 3549858 CTTTGATGATCTCCCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30502 FBgn0050502 FBtr0300959 2 1 1 80 2R 3334675 3336930 GTATGGAGCACCTAGTGGAC 59 3334614 3334632 GAACCCACTCATCGTAGCA 59 NA Drosophila melanogaster 61 pwn FBgn0003174 FBtr0088962 3 1 1 80 2R 3186191 3186210 AAGGTGAACAACATCTACCG 58 3186253 3186330 TTCATCCAGCTTGATGGTC 57 NA Drosophila melanogaster 61 CG30385 FBgn0050385 FBtr0089047 1 1 1 60 2R 3069504 3069522 GACCGAACCTTTGCTAGTC 58 3069546 3069564 TTTCGATGCGTATGATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9b1 FBgn0015038 FBtr0089056 2 1 1 92 2R 3015873 3015891 AGAGCGATTTAGCGAAAGG 58 3015703 3015817 TAGCGATTTCCAATGCAGC 59 NA Drosophila melanogaster 61 Tsp42Eo FBgn0033136 FBtr0089035 3 1 1 83 2R 2943743 2943945 CTTATTGGCTACGAGGTCGT 59 2943991 2944009 GTAGGTGTAGCGACGAGTC 59 NA Drosophila melanogaster 61 Tsp42Ee FBgn0029506 FBtr0086180 1 1 1 80 2R 2905061 2905082 AGTTCGTCGAATTAATGACCAC 59 2905123 2905204 AGCCGATCAGCTCTATTCC 59 NA Drosophila melanogaster 61 CG17002 FBgn0033122 FBtr0086170 2 1 1 103 2R 2874431 2875153 CCAGCAGAAACACGATGAC 59 2875312 2875330 TCTGGTAGAAGACCGTTCC 58 NA Drosophila melanogaster 61 CheB42b FBgn0066293 FBtr0086192 1 1 1 94 2R 2831321 2831340 TTGTAATCGACCAGAAAGGG 57 2831180 2831264 AAGTCTCGCAGTAATCCGA 58 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131,FBtr0086127,FBtr0086129,FBtr0086130,FBtr0300285 2 5 5 84 2R 2642342 2642416 CAAATCAGGTGATGGATATGC 57 2642460 2642480 TCAATATCCCGCAACTTAGAG 57 NA Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 2 2 2 80 2R 2126347 2126367 GGATTCAGTCACAGCTATACG 58 2126406 2126499 CTTTGCATACAACTGTATGGGT 59 NA Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 1 1 1 66 2R 2090870 2091539 TTGAAAGCCTGGACTTCCA 59 2091569 2091587 GACGATTCCCAGTACGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Or42a FBgn0033041 FBtr0086052 2 1 1 89 2R 1679083 1679165 GGGAACTAACATCAGTGTCAC 58 1679014 1679035 TCAGATTTGGCAAGTTTCTCAG 59 NA Drosophila melanogaster 61 CG17508 FBgn0039970 FBtr0086071 2 1 1 94 2R 1497677 1497696 TTAAGGAATATGGAGCGCCA 59 1497750 1498706 GTTTATGCCACTTGATACAAGC 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 3 5 5 92 2R 1491516 1491765 AAGTTCGCTCCCTAGAGGA 59 1491442 1491461 CAAGTACTAAAGCTGCTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CR31700 FBgn0051700 FBtr0301969 3 1 1 61 2L 22066785 22066803 AAACGAACGTTGAAAGCGA 59 22066828 22066846 TAACACTGCTCGACTCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:Q:34E FBgn0028909 FBtr0080609 1 1 1 60 2L 14010614 14010636 GGTTCTATGGTGTAATGGTTAGC 59 14010576 14010594 AGATTTGAACTCGGATCGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31808 FBgn0062978 FBtr0080943 3 1 1 122 2L 16715862 16715884 CCACTACTGAAATTTCTAGAGCG 59 16705781 16715780 ACGCACAAGCGTAATATGC 59 NA Drosophila melanogaster 61 CG6675 FBgn0032973 FBtr0299905 1 1 1 80 2L 22109151 22109231 GGCTACAATAGGCATACCCA 59 22109272 22109292 GGTAGAGCATTCATGAACTCC 58 NA Drosophila melanogaster 61 CG1421 FBgn0032966 FBtr0085928 1 1 1 60 2L 21903266 21903284 ATCCGTAAGCGACTACGAG 59 21903303 21903326 GATATCGAGAAAGAAGCAGTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173,FBtr0085925 1 2 2 106 2L 21589052 21589070 CTGCTCATCAAAGGTTCGA 57 21587406 21588985 CTTCATTTGTGGGTTTACATCC 58 NA Drosophila melanogaster 61 CG9328 FBgn0032886 FBtr0081416,FBtr0081415 2 2 2 147 2L 20813348 20813441 ATGCCAGAGTGGGAAAGAG 59 20813552 20813570 CCGAGTTCTCCTTTCAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG9319 FBgn0032881 FBtr0081460 2 1 1 113 2L 20752113 20752132 AGATTCTAACCGACTTTGGG 57 20751946 20751964 TCGGGTTCTTCAGATCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 mRpS18B FBgn0032849 FBtr0081339,FBtr0081338 1 2 2 135 2L 20096892 20096910 TTACAAGCAAACCTACGGC 58 20096713 20096731 AATGGGACAGGGATTTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0081318,FBtr0300966 1 3 3 80 2L 19778936 19779026 GGACAGAACATCAACAACCA 58 19778875 19778895 GTTAAGGTCCAAGGATAGCTC 58 NA Drosophila melanogaster 61 CG10262 FBgn0032813 FBtr0081262 1 1 1 83 2L 19583866 19583884 TCGTCGATGCACTAAAGGA 58 19583667 19583685 AGTTGTCCATCGATTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10337 FBgn0032805 FBtr0081276 1 1 1 99 2L 19546267 19546285 CAAGACATGGCAGAAGCTG 59 19546120 19546205 AGCACAACCGATTATACCGT 59 NA Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 3 2 2 183 2L 19496695 19496715 TGCGAATAACAAGTCTACCCA 59 19496859 19496969 GCCGAAGTTCTTAAAGTGCC 59 NA Drosophila melanogaster 61 Top2 FBgn0003732 FBtr0081287 3 1 1 120 2L 19451819 19451839 GCTCTGCAACATATTCTCCAC 59 19451662 19451737 GTCCTTGATCTGCACATCG 58 NA Drosophila melanogaster 61 CG13085 FBgn0032780 FBtr0081203 3 1 1 175 2L 19426682 19429405 GAGGAAGAAATCAAGTGTGCA 58 19429542 19429560 CATGCTGAACCTCAAGTCC 58 NA InUTR Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 1 4 4 80 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391897 19391915 CTTGTCAGCTCTTCAGTGG 58 NA Drosophila melanogaster 61 l(2)37Cb FBgn0086444 FBtr0081163 3 1 1 121 2L 19126466 19126485 CGAGTACAAGAAGCAACTGC 59 19126304 19126384 CAACGTATTCAGATCGCTCTC 59 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 1 3 3 86 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 Mst36Fa FBgn0086681 FBtr0302225 3 1 1 80 2L 18675420 18675577 CGCGAAGAAAGGTCTAAAGG 59 18675359 18675379 CATTTCAGGCTTTGTATCGGA 58 NA Drosophila melanogaster 61 CG31789 FBgn0051789 FBtr0081071 2 1 1 61 2L 18606095 18606113 CTCATCAGTTTCCCACTGG 57 18606197 18606218 GTTATGCTAATGTACCGAATGG 57 NA DesignNoJunction Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090,FBtr0081089,FBtr0081091 1 3 3 117 2L 18442811 18442829 AATCCACTCCAAGGTGGTG 59 18442712 18442732 AGACCTCTACTTCCTGTTCTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG31787 FBgn0051787 FBtr0081055 3 1 1 60 2L 18285142 18285160 GGCAAGATCCATGTGAACC 58 18285100 18285119 CTATCGCTCGAATGAAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5110 FBgn0032642 FBtr0080983 2 1 1 60 2L 17481348 17481368 CAAGAAGTATTTAGACGGCCT 57 17481464 17481486 CGTAATCTGAATAACGTACAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Aac11 FBgn0027885 FBtr0081001 3 1 1 92 2L 17476476 17476494 TTCGCCGAGATGATAACCA 58 17476347 17476421 CAAAGGCATGTATTCCAGCA 59 NA Drosophila melanogaster 61 CG17904 FBgn0032597 FBtr0080891 2 1 1 60 2L 16733499 16733522 GAGTTTAAGAATGTCACCACTGAG 59 16733540 16733559 AGCTGGCCATAATCTTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 c(2)M FBgn0028525 FBtr0080830 3 1 1 80 2L 16304296 16304368 CGGAACTCACTAAAGCGAC 59 16304412 16304430 GCAATCATCCAATCTGGGC 59 NA Drosophila melanogaster 61 CG15286 FBgn0028531 FBtr0080625 2 1 1 60 2L 14339455 14339474 ACAATACTCGATCCTTGACC 57 14339496 14339515 CTAATACGATACCGCTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9302 FBgn0032514 FBtr0080470 1 1 1 80 2L 13377084 13377103 TGACGACAACTTCAGTTCGA 59 13376960 13377041 TTACAGTGTCCACACCAGG 59 NA Drosophila melanogaster 61 CG6565 FBgn0032513 FBtr0080468 2 1 1 81 2L 13375142 13375222 CTCATACAAGGTTTATGCTCGA 58 13375264 13375282 GCGACGGTAATCCAAATCC 59 NA Drosophila melanogaster 61 Drep-4 FBgn0028406 FBtr0080478 3 1 1 132 2L 13285634 13285707 GTCATTACAACAGATGCCGA 58 13285521 13285540 CATACTCCGTTATCATGCGG 58 NA Drosophila melanogaster 61 CG16813 FBgn0032490 FBtr0080446 3 1 1 61 2L 13228052 13228070 AGATTGTGGCTACATCGAC 57 13228095 13228113 CATGTTAGCGTGGTAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5458 FBgn0032478 FBtr0080437 1 1 1 80 2L 13183594 13183612 CATGACCGAAATGTCCGAG 59 13183652 13183838 CCTATGTAGAGGCCTATATTGGG 60 NA Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 2 2 2 94 2L 13014015 13014034 ATCGAGGATAAAGCGACTGG 59 13013875 13013963 GGTTGGTAACATAGATTTCGTGAG 59 NA Drosophila melanogaster 61 CG12404 FBgn0032465 FBtr0080430 3 1 1 110 2L 12994232 12997476 TTTAATCACCATTCAGGGCAC 59 12994142 12994160 TGATGGTCCATGGAGAAGG 58 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 1 1 2 146 2L 12678863 12678881 ACACAAACACAGCAATCGG 59 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Nonspecific Drosophila melanogaster 61 CG16996 FBgn0032412 FBtr0080334 3 1 1 60 2L 12110364 12110382 AGTTACCTTGTGGTCAGGC 59 12110404 12110424 GATATAAACGACGAGACCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 3 3 3 177 2L 12104543 12104696 ACTCGCAAGGAACTCAGTC 59 12104837 12104855 CTTCGTACGGAGTGGTCTC 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 3 3 4 82 2L 11799399 11800169 TACTTTGGCATACAGGCGA 59 11799335 11799353 GTGGTTAAGCAAGTGCTCC 59 NA Drosophila melanogaster 61 spz4 FBgn0032362 FBtr0080238 1 1 1 89 2L 11507377 11507454 CGTGGAGTAAATGCCTGTC 58 11507507 11507525 ATTGAGGAGGGCTAAGACC 58 NA Drosophila melanogaster 61 CG6230 FBgn0027582 FBtr0080228 2 1 1 80 2L 11116561 11116580 AATATTGTTAGCAGCACGGT 58 11116446 11116520 CGGATAGCCCTTGTAATTCAC 58 NA Drosophila melanogaster 61 SCAR FBgn0041781 FBtr0080148 2 1 1 80 2L 10981048 10981067 GTATGACGGGCAATCAACTG 59 10981110 10981194 ACATCTTAGGCGAGTGCTG 59 NA Drosophila melanogaster 61 abo FBgn0000018 FBtr0080168 3 1 1 128 2L 10974289 10974307 GACGGAAAGTCAGAAGTCG 58 10974122 10974140 GTATCGGTACCATTTGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080138,FBtr0080137 1 2 2 123 2L 10790320 10790338 TTGAAATTAGCCACAGCGA 57 10790473 10790491 GAAGGAGAACTGAGGTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7299 FBgn0032282 FBtr0080130 2 1 1 60 2L 10684285 10684303 AATGCTAACGCAAATGCCA 59 10684243 10684261 TGAATCCTGGTCTTCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TfIIB FBgn0004915 FBtr0080025 2 1 1 93 2L 10431814 10431832 GAGATATCCTCGATGGCCG 59 10431886 10431962 GGTTCTTTCCATCATGAACCTG 59 NA Drosophila melanogaster 61 pie FBgn0005683 FBtr0080046 3 1 1 61 2L 10422556 10422575 CGAATGGATGATTGTACGCA 58 10422447 10422532 AATGCGTTGAGAGTAGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 3 3 3 85 2L 10324300 10324388 GATATTCCAGGCTTTGCCAG 59 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 Npc1a FBgn0024320 FBtr0079957 1 1 1 80 2L 10218274 10218293 AGAAACGCTGTGGATTTCTG 58 10218154 10218234 TCTTATTAAGGAGCTCCACCTG 59 NA Drosophila melanogaster 61 CG31875 FBgn0051875 FBtr0079973 1 1 1 60 2L 9996049 9996070 GACTGTACTTCTCCTTCATGTC 58 9996010 9996028 CTATGGATGGCCTGTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 3 2 2 252 2L 9967697 9967715 GAAGACCTGGTTCAACCAG 58 9967992 9968010 GGATTTGTTCTTGCGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5924 FBgn0032154 FBtr0079911 2 1 1 98 2L 9892457 9892644 AACATTGAAACGCATTGCG 58 9892377 9892397 AAAGATGAGCTCTTTGAAGCG 59 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 1 2 2 82 2L 9742429 9742447 GATCCGGAGCTCAATTCCA 59 9733523 9742384 TTGTGCGTGTCATTGATACC 59 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079850,FBtr0079852,FBtr0079851 1 3 3 94 2L 9699155 9699176 CGAGGCAATATTTCTGAAAGTG 58 9698201 9698221 GCTTATGATCGCGATTTACTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 2 2 2 80 2L 9649135 9649210 AACACTCAACCAGCTTCAC 58 9649251 9649272 GTCTTAATCCTTCCATTAGCGT 58 NA Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 1 2 2 99 2L 9613532 9615312 AAAGATAAGGCCGATCTCGA 58 9615374 9615392 AGATCATCTTGCAGGGTCC 59 NA Drosophila melanogaster 61 CG13102 FBgn0032088 FBtr0079766 3 1 1 81 2L 9012554 9012640 CAACTGGAATAACGATGTGATCC 59 9012681 9012699 CGGCTTAAGTGCTAAGCTG 59 NA Drosophila melanogaster 61 CG18662 FBgn0040963 FBtr0079760 1 1 1 80 2L 8981012 8981093 GTACCATCTTGATGTATACGATGAG 59 8981131 8981149 TAACCACCTCCAAGACCCT 60 NA Drosophila melanogaster 61 Mur29B FBgn0051901 FBtr0079607 3 1 1 91 2L 8354723 8354741 TCTTCGCCATCCATAAGCA 59 8354796 8354887 CGGTTTAACTCTCCGTCCT 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301339,FBtr0079628,FBtr0079625,FBtr0302147,FBtr0302148,FBtr0301338,FBtr0079630,FBtr0079626 3 9 9 80 2L 8225152 8225170 GGCCTATCACTTCGATGGA 59 8225027 8225110 GTCTCAATGTGAACCGAATCC 59 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 3 2 2 84 2L 7988318 7988404 TCCGGGTATTACCTTGTATGAG 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112720 2 1 5 128 2L 7975221 7975239 CTCAAGGAGATGCACAAGG 58 7958636 7958655 TGGCATAGATGAATGACTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31902 FBgn0051902 FBtr0110841 2 1 1 81 2L 7888035 7888059 CCTTTATAGAGATTGACGAAGAAGG 59 7887921 7888000 GTCGCATAATCAGATAATCCTCG 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331,FBtr0079492 3 3 3 92 2L 7805776 7805860 ATGGAAGACAAACAAAGCTGG 59 7805704 7805724 GTTGATACCGTACGTATGCTG 59 NA Drosophila melanogaster 61 CG31907 FBgn0051907 FBtr0079425 3 1 1 106 2L 7060756 7060839 CAGAATCGACCTGTACTCCT 58 7060669 7060688 TTGGTCCATGGACTAGTGTC 59 NA InUTR Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079399,FBtr0079398 1 3 3 122 2L 7051532 7051550 AAACCGATCTCAAGGCCTC 59 7051635 7051768 TGGGAGTGTCAGTATCTGTG 58 NA Drosophila melanogaster 61 CG13989 FBgn0031786 FBtr0079204 2 1 1 199 2L 6160772 6160790 TATATGCCACGATTCCAGC 58 6160953 6161026 GTGGTCGTTAAGCAAATCC 57 NA InUTR Drosophila melanogaster 61 CG31639 FBgn0051639 FBtr0079207 2 1 2 99 2L 6154870 6154956 AAGCCTAGCAACAATATGTGC 59 6154791 6154809 CACAAGGACTACACCAGGG 59 NA InUTR Drosophila melanogaster 61 CG9150 FBgn0031775 FBtr0302213 1 1 1 116 2L 6067955 6067973 ATCTTCCCGGAAGAGATCC 58 6067800 6067877 TTCATGTACCTGAACATGAGG 57 NA Drosophila melanogaster 61 H2.0 FBgn0001170 FBtr0079227 2 1 1 127 2L 6013695 6013713 GTCTTCTCGAATCTGCAGC 58 6013484 6013604 AACCACACCTTGACCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Vm26Ab FBgn0003980 FBtr0079171 2 1 1 73 2L 5957438 5957457 AAGAACTACCTGTTCAGCTG 57 5957493 5957511 GATCCGTAGGACTGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31647 FBgn0051647 FBtr0079131 1 1 2 83 2L 5445157 5445175 AAAGCCATAAACCGCACAC 59 5439274 5445111 CAACTGTCGTGTAGTCTCCT 59 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 3 2 2 89 2L 5324781 5324799 TCAGTCAGTGCAATTCGAG 57 5324648 5324731 GTCTCGTTTACATTATCCTTGG 57 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 3 3 3 101 2L 5307902 5308028 GGCTTCTAACTTGCATCCG 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 CG14033 FBgn0046776 FBtr0079065 2 1 1 60 2L 5243923 5243942 GGTTACACAGAGCTGAACAG 58 5243965 5243983 GAGTAAGTTCGTCCTCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF-3p40 FBgn0022023 FBtr0079031,FBtr0079030 3 2 2 193 2L 5051564 5051648 AAGCAGGATACGGAGAAGC 59 5051389 5051407 AATTGTGCGATATGCTGGG 58 NA Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983,FBtr0110984 2 2 2 60 2L 5039691 5039709 TCTACAAGGATGGCAAGTG 57 5039733 5039819 GGCTCATCAATCTGATCCA 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34126 FBgn0083962 FBtr0290010 2 1 1 80 2L 4985416 4985871 TTGTTTCGGGTGACAAGGA 59 4985909 4985933 GGTAGTAGAAGTAAGTATATTCCGC 58 NA Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079050 2 1 2 81 2L 4971136 4971154 TCTGCGACATCAATGTCCT 59 4970771 4971097 CCCTTAATCATATTCTGGTGTTTCC 60 NA Drosophila melanogaster 61 betaggt-I FBgn0015000 FBtr0078991 1 1 1 110 2L 4946003 4946078 GATAACACCAGGAGCACCA 59 4946149 4946170 GTAGATCCAGTCAATGATGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3036 FBgn0031645 FBtr0077391 2 1 1 124 2L 4902790 4902808 ATGGCTTGGATATTGCACC 58 4902893 4902982 GAAGGATTGATCCTTGTAGGTG 58 NA Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 1 2 2 86 2L 4434740 4434858 GGAATGCTGTTTACGTGTG 57 4434907 4434926 ATCTGGATAATTGGCATCCC 57 NA Nonspecific Drosophila melanogaster 61 CG17612 FBgn0031597 FBtr0077464,FBtr0077463 1 2 2 60 2L 4382272 4382291 GCAAATAACGACGTGATCCT 58 4382231 4382252 GATCCTCAAGAATTACCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16857 FBgn0028482 FBtr0077425 1 1 1 116 2L 4330949 4331035 CTTTCAAACGCTACCCTCG 59 4331115 4331133 GTGAGATTCCAGGGAGCTC 59 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 1 3 3 80 2L 3870539 3870628 CACAGGAGTATATCGAACAACTC 58 3870668 3870686 GCTGCTGAATCTTTCGCTC 59 NA Drosophila melanogaster 61 CG31777 FBgn0051777 FBtr0077542 2 1 1 85 2L 3706783 3706934 CCTTCAATACCCAGTATTTGCA 58 3706719 3706740 GGATCGTAATAGTATCCCTCGA 58 NA Drosophila melanogaster 61 CG2816 FBgn0031564 FBtr0300299 3 1 1 75 2L 3703812 3703883 GTGAAACTATGCCTGCAGC 59 3703920 3703940 TAATGGGATTGTAGGCATAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15406 FBgn0031517 FBtr0077580 3 1 1 80 2L 3309434 3309453 TCAGCATATTCAAATCGGGC 58 3309495 3309785 AGGTTATCAGAGTGGCACTC 59 NA Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 3 2 2 80 2L 3067257 3067275 AGACGAATGTGACCTTGGT 59 3067318 3067398 TTGTGCAGACCTCCTTAAGG 59 NA Drosophila melanogaster 61 CG15400 FBgn0031463 FBtr0113017 1 1 1 80 2L 2814849 2814870 GGCATTGTCAGTGTACTATGTG 59 2814740 2814811 GGACACCATTTAAATGCCTCTC 59 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089749 3 1 4 150 2L 2741043 2741118 GAATCCCTTGACACCATGAC 58 2741231 2741249 TGGTGAAGGTGAACTCCAC 59 NA Nonspecific Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077772,FBtr0077775,FBtr0077771,FBtr0077773 3 5 5 291 2L 2455836 2455854 CTCTACGCCGAGATCATGG 59 2457832 2457850 TGTCGTAGACAAGCACCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4271 FBgn0031409 FBtr0077756 1 1 1 60 2L 2285199 2285220 TGATCTTATTTGCACGAAGCTC 60 2285238 2285259 AAGTCAAACTTTGCCTCTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 1 2 2 140 2L 2263744 2263822 GAATGGGCCAATCATCTCC 58 2263924 2263944 GCTATTGATTTCCCGATACCA 58 NA Drosophila melanogaster 61 CG34172 FBgn0085201 FBtr0112363 3 1 1 90 2L 2192798 2192816 CTACCCGATGGACTTTCCA 58 2192664 2192682 AAATCTTATCCGCAGGTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 1 5 5 80 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938580 TTGATCCATCCAAGTTGGC 58 NA Drosophila melanogaster 61 CG18317 FBgn0031359 FBtr0077910 2 1 1 80 2L 1718723 1718741 ACGTAAGCTAAGCACAACG 58 1718478 1718680 GAAATGGCCATGATCCTACG 58 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 2 1 2 242 2L 1344515 1344588 ACCTTTGCGCAGATAAACAG 59 1344793 1344811 CATAGGATCCGAAGTTGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14342 FBgn0031324 FBtr0114498 1 1 1 89 2L 1204607 1204625 ATACAACGAGTGTTTCCGC 59 1204678 1204771 GCAAAGGTTCTGTGTACCC 59 NA Drosophila melanogaster 61 CG13014 FBgn0030759 FBtr0074282 3 1 1 66 X 16482384 16482402 AAGTCGAGACGTTACTCCT 57 16482432 16482450 GATTTACGGTCTGCAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2202 FBgn0030240 FBtr0073380 3 1 1 89 X 10744993 10745098 AAGGTCCATGAGCGTTACC 59 10745150 10745169 GATCGTTAGATTGTACGCGC 59 NA Drosophila melanogaster 61 CG32758 FBgn0052758 FBtr0070843 2 1 1 88 X 5617386 5631140 CCTGGAAGTAAATGGCGTC 58 5617316 5617334 TCAGAGTTAGGCAGTCACC 58 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 2 2 3 131 X 3373524 3373542 CATTGGGTTTAAGGCCACG 59 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 pinta FBgn0038966 FBtr0084297 3 1 1 120 3R 18249661 18249679 TCATCAAGAGATCCGTGGA 57 18249502 18249580 GGCGTCATGAATATTCTAAAGG 57 NA Drosophila melanogaster 61 CG7333 FBgn0038715 FBtr0114553 3 1 1 82 3R 15426467 15426488 CGGCTACACAAATATTCTTGGA 58 15426531 15426613 CATGGAAGCACCAATGCTC 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637 2 1 5 93 3R 14403293 14412006 TAAGAGGAGAACTGAGGTGG 58 14412061 14412080 TCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 CG18545 FBgn0037812 FBtr0082234 1 1 1 71 3R 6166713 6166731 TATGGCTCACCATTTCGCA 59 6166826 6166844 TCATCCTGGATGTAGGCTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 2 1 1 104 3R 5878496 5878514 AGATGTAGAGCGCCTTCTG 59 5878353 5878428 CATGTATCCTCACTGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Osi5 FBgn0037413 FBtr0078595 3 1 1 81 3R 2053731 2054175 GAGTCCCAAGTTTCAGAAGC 58 2054217 2054237 TCATCTTGCCAAACATCAGAG 58 NA Drosophila melanogaster 61 Jon66Ci FBgn0035886 FBtr0076608 2 1 1 71 3L 8384853 8384871 ATCATCTCCAACGAGTGGG 59 8384905 8384924 TCCGAAGTAGACAGTCACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7197 FBgn0035866 FBtr0076715 1 1 1 60 3L 8292183 8292201 GTCTGGGATCTTGGTGGTC 59 8292141 8292160 TGTTCGTGTAGTAGGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 exex FBgn0041156 FBtr0076751 2 1 1 98 3L 7943440 7943458 AGGAGGACATCCCTACCAG 59 7943519 7943673 TTATGACCCATGGGTATCGG 59 NA Drosophila melanogaster 61 HBS1 FBgn0042712 FBtr0072866 2 1 1 60 3L 1864617 1864636 AGATCCTCAACGAAGAGACC 59 1864576 1864595 GGCGCTTTCATCTTATTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alphaPS5 FBgn0034880 FBtr0072063 2 1 1 84 2R 19447513 19447583 ATCCTCTACAAGCTTCGGT 58 19447631 19447649 CTTTCGTCTCGGATCTGTG 58 NA Drosophila melanogaster 61 Lcp4 FBgn0002535 FBtr0088744 1 1 1 108 2R 4325203 4325280 GTTCAAGATCCTGCTTGTCTG 59 4325350 4325368 CTTGCTTACGAAGCCATCG 59 NA Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088823,FBtr0088822 2 2 2 60 2R 3985371 3985389 ACGTAGACCAATTGTGCTG 58 3985329 3985347 ATAGACTTGGAGGATGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081370 1 1 2 96 2L 20387588 20399219 TTGTGAATGGAAAGGGCAG 58 20387510 20387529 TCTGTACTAAAGCTGCTGAC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG11835 FBgn0031264 FBtr0078076 2 1 1 60 2L 561942 561960 ATTACTCCATCGGCACCAC 59 561900 561918 GTTTGAGAGCACTCTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31921 FBgn0051921 FBtr0078096 1 1 1 60 2L 331928 331949 GTATCCAAATGCAGTAACGACC 59 331889 331908 CTCCCTGATCTACTGACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11911 FBgn0031249 FBtr0078098 3 1 1 60 2L 320992 321010 ACAAGGACTGGATTGTGAC 57 320950 320968 ATGATGCTCATGCCTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 3 3 3 83 2L 215084 215105 AGTGATCAATAAACAGACAGGC 58 214931 215040 TTCTCCGTAAGCCATTGCA 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 3 4 4 80 3R 16883558 16883578 CCATTATTGGATCCGACATGC 59 16883426 16883518 ACAAAGGCACTACTTTGTTGG 59 NA Drosophila melanogaster 61 CG13144 FBgn0032260 FBtr0080037 2 1 1 60 2L 10490687 10490705 CAGCGTGGAATACCATCTG 58 10490645 10490665 CAATTGATTGAGAGGTTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33322 FBgn0053322 FBtr0081455 3 1 1 99 2L 20814673 20814692 AAGTTGAGGAGTTCCATGTG 57 20814523 20814611 TTAGAAACTCGTGCAGCTG 58 NA Drosophila melanogaster 61 nimB4 FBgn0028542 FBtr0080617 3 1 1 93 2L 13968826 13968906 ATTGCTATATGACCTGCGAG 57 13968752 13968772 CAGGTCGTCGTATTCTTATCG 58 NA Drosophila melanogaster 61 CG15634 FBgn0031621 FBtr0077378 1 1 1 60 2L 4687764 4687782 ATGACGGCTTGATGAAGGA 59 4687806 4687824 GAATGGAGAACGCAGAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12121 FBgn0030109 FBtr0071334 2 1 1 80 X 9125796 9125878 GAGCAGTCTACAGATTTGATGG 59 9125737 9125756 TTGATGCGAGTCCAAATAGG 58 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224,FBtr0100296 3 5 5 91 4 1035345 1035412 ATCGATTGGGCAAAGACTC 57 1035272 1035294 GTCTCTATAATAGCGATCTACCC 57 NA Drosophila melanogaster 61 CG6843 FBgn0036827 FBtr0075067 3 1 1 128 3L 18894841 18894860 GCTTCAACAACTACATGTGC 58 18895029 18895047 CATACTGGTTGCGTAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323,FBtr0113322,FBtr0113324,FBtr0076460,FBtr0076459 3 5 5 188 3L 9429056 9429075 CATACGAATGTGAGGTGTCC 58 9429334 9429352 CTTCCGGACATTTGTAGGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Aprt FBgn0000109 FBtr0089420 3 1 1 80 3L 1884237 1884331 TACGGTATTGACACCTTTGAG 57 1884177 1884195 GGCTAGTAGATCGTCAACG 57 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 2 5 5 84 3R 14585654 14585785 CCTGAAAGATCCGGACTGG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 Taf13 FBgn0032847 FBtr0081340 2 1 1 81 2L 20093243 20093333 GAGATCAAGTATGTGGGCAC 58 20093181 20093202 TTTGGCTTATACCTGGATTTGG 58 NA InUTR Drosophila melanogaster 61 CG42346 FBgn0259677 FBtr0299928 3 1 1 80 X 22281552 22281893 AAGACTGGAGGAGAATCCA 57 22281937 22281955 GACCATTTACGGTGATCCC 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 2 3 3 116 X 21003861 21003879 CATTCGTAACCGACGAACG 59 21003957 21004216 TACTTCGTATGATGTCGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34328 FBgn0085357 FBtr0112530 3 1 1 60 X 18293880 18293898 GGAGCGTACTGAAGAGGAC 59 18293838 18293857 ACTATGTTGAAGTGGTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 3 2 2 99 X 17320861 17320879 TCTAACCCGTCTCTGTGAG 58 17320941 17321462 GACAAAGCGGTATAGTCTGG 58 NA Drosophila melanogaster 61 CG34327 FBgn0085356 FBtr0112529 3 1 1 69 X 17117361 17117379 TTTGGGAAGCTTAAGCAGC 58 17117310 17117328 TGAGGAACCACCAGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 2 4 4 80 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896736 15896927 CCTGGTCCAGCTTTAACCA 59 NA Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151,FBtr0074152 2 2 2 76 X 15880427 15880445 CCACTGACTTTCGGTTTGG 59 15880369 15880388 TATCGATCCATGTCGTAACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 3 1 1 140 X 14802832 14802851 CGATTTGAGTCAACCCTACG 58 14802316 14802729 AACTCAGATTCGACGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33245 FBgn0053245 FBtr0300094 3 1 1 110 X 13943517 13943535 TCTGATACACAGCTGGACG 59 13943365 13943443 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 1 4 4 80 X 13696193 13696278 ATCTCAAGAGCTTGGTTATCC 57 13696320 13696338 CAGTGGTGTAGTAATGCCC 57 NA Drosophila melanogaster 61 CG15928 FBgn0040856 FBtr0301091 2 1 1 68 X 11878822 11878840 AATATTGCCATCATCGGCG 58 11878772 11878790 TTTGTTAGACCCTTGCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2256 FBgn0029995 FBtr0301736 1 1 1 152 X 7979034 7979052 CAACTCGAGCAACCAACAG 59 7978820 7978918 AGCTCGTCCTTCGTAAACC 59 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 2 2 2 80 X 6736604 6736622 GGAACAACAATGGATCCGC 59 6735974 6736563 TCATTGACATGTCCCTTATGGA 59 NA Drosophila melanogaster 61 CG3224 FBgn0029885 FBtr0070992 2 1 1 168 X 6555394 6555413 AAACCCTCGTTTCTTAACCA 57 6555185 6555203 GCGTTTCGATACCATTCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5941 FBgn0029833 FBtr0070867 2 1 1 106 X 5932588 5932916 ACACAGGAAATTCTGGCGA 59 5932982 5933004 GATTCCTATTTCGCCTACTTCAC 59 NA InUTR Drosophila melanogaster 61 CG3108 FBgn0029807 FBtr0070833 3 1 1 127 X 5673281 5673375 CAAATATGATGGCCAACTGTG 58 5673174 5673192 TGTCGATCAGAACGATCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15465 FBgn0029746 FBtr0070742 2 1 1 101 X 5059530 5068949 AACCAAGGATAAACCTCTAGAC 57 5069010 5069029 TTTCCCTCATTTGGCTTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 yin FBgn0015565 FBtr0070632,FBtr0070633,FBtr0070631 2 3 3 81 X 3759157 3759175 TATCGCTGGTGTATAGCCT 57 3759038 3759112 GTCACAGCTTTAGTTGGCA 58 NA Drosophila melanogaster 61 CG10802 FBgn0029664 FBtr0070568 1 1 1 95 X 3377103 3377186 GTTTCCTGAAGGAGTTCAAGAC 59 3377242 3377260 AGCCCTTGAGTTTCTCCAC 59 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487 3 2 3 132 X 3373525 3373543 TCATTGGGTTTAAGGCCAC 58 3373351 3373429 GTTCCGGAAGCACTATTGG 58 NA Drosophila melanogaster 61 dm FBgn0000472 FBtr0070525 2 1 1 85 X 3270192 3270210 TCACCGATCACAGCTACAC 59 3270256 3278430 GATTTCCTCATCGGAATCTGAG 58 NA Drosophila melanogaster 61 Klp3A FBgn0011606 FBtr0070448 2 1 1 80 X 2494439 2494457 GAGACAGTGGTACTAAGCG 57 2494294 2494396 ATCGGATTGAATCCTCTTGG 57 NA Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 1 2 2 80 X 2045870 2045962 GCTAAGCATACTGGTTCTTACAC 59 2045812 2045830 GCAGCTTGCATTAGAGCAG 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 3 2 4 182 X 516159 516242 ACCAGGTGGAGATTATATCAAGAG 59 516381 516476 GAAGAAGCTCCCTGATATGCT 59 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 1 1 2 290 4 1051401 1052236 ATGTGGCTGAGTAGAGGAG 58 1051129 1051150 ATAGATCTCAAATAGCCCAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31997 FBgn0051997 FBtr0089154 1 1 1 81 4 175702 175720 AAGTCGTGGGACCTTACTC 58 175578 175658 CGAGTTCGAATAGCTTTGCA 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377c FBgn0083049 FBtr0113596 2 1 1 74 3R 26033162 26033180 CCGTTCTTGTGTTATTCGC 57 26033106 26033124 ATTCGTTGCTTCAGTTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cec-Psi1 FBgn0000280 FBtr0085613 3 1 1 60 3R 26037277 26037295 CTGACCACTTATTGGCCAC 58 26037316 26037398 ATAGACCAACGTCTAATGTCCC 59 NA DesignRelaxed Drosophila melanogaster 61 CR34285 FBgn0085314 FBtr0112481 2 1 1 60 3R 15212701 15212813 GCTACGACTCAGTTTCCAC 58 15212835 15212855 AAGTTTCCAAGCTGAGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 1 2 2 95 3R 27079869 27079887 GAGCCGAGTTACTTGTGGA 59 27079737 27079810 TCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 CG12054 FBgn0039831 FBtr0113312 1 1 2 104 3R 27052705 27052723 TCACCCTGACCAATCTTCC 59 27052790 27054427 AAGAGGTTTCTGTTGCAGTG 58 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 3 2 2 81 3R 25844464 25844482 TTCAGACGCATCCTAACGA 58 25844344 25844419 GTGATCAGAGCTTGCTCCT 59 NA Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 3 2 2 89 3R 23779656 23779732 TTATACCAGTACAAGAAGCACC 58 23779588 23779606 ATCATTCTTGGATTCCCGC 58 NA Drosophila melanogaster 61 CG3330 FBgn0039511 FBtr0085170 1 1 1 60 3R 23155859 23155879 ATCACTCAAGTCCTCCAAGTC 59 23155819 23155839 TTTCTTGAGGGATGACTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 woc FBgn0010328 FBtr0112857,FBtr0085178 1 2 2 81 3R 23083857 23083875 GTACTACGAGCGGTTTACC 57 23083730 23083813 GACAATGTATTGCGAATCGT 57 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0113296,FBtr0085147 3 3 3 81 3R 22889052 22889073 ACATTAACCATGGCTTCTTTGG 59 22887271 22889011 CTGAGGTTACCTGGTGTCTG 59 NA Drosophila melanogaster 61 CG12290 FBgn0039419 FBtr0084990 1 1 1 60 3R 22058279 22058297 TCGCCTACAGGAACAAGAG 59 22058320 22058339 GACGAATCCAGACCAAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmbeta FBgn0002733 FBtr0084982 2 1 1 60 3R 21831190 21831208 CAACTACCTGCAAGTGGTG 58 21831148 21831166 TACTGGAGCTTGAAGAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL27 FBgn0039359 FBtr0084932 2 1 1 60 3R 21509858 21509876 TTCGAGTCCGTCTACAAGG 58 21509816 21509835 CTTAGAAACGCAGCTTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31357 FBgn0051357 FBtr0084735 3 1 1 60 3R 20655013 20655037 GTGCATAGACAATAAGTCTAAGCTC 59 20654977 20654996 CCTCAGGCTGAATTCAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084687 1 1 2 191 3R 20540698 20540783 CGATGTCTCCATTTCTGCTG 59 20540937 20540955 GATCGCTGCGTATTTGGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG5706 FBgn0039175 FBtr0084637 3 1 1 174 3R 20078133 20078225 GACGTACACCGATGATGAG 57 20077914 20077932 CAGATCATACCGATTGGCG 58 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 3 3 3 80 3R 19574387 19574471 CCGACATTATCATCAAATGGC 57 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 CG13822 FBgn0039098 FBtr0084434 1 1 1 94 3R 19503802 19503820 AACCACGGCAGAAATACTG 58 19503875 19503969 GATCAAAGTCATTCTCGAACAC 57 NA Drosophila melanogaster 61 rumi FBgn0086253 FBtr0084320 3 1 1 112 3R 18576192 18576212 TTAGTTTGGTAGGAACAGGAG 57 18576050 18576121 CTTGAAGCTAAATTCATCCTCG 57 NA Drosophila melanogaster 61 CG17618 FBgn0040587 FBtr0113328 2 1 1 73 3R 18553152 18553170 TCGCTGCCAGATTATTCAG 57 18553207 18554576 CCCGTTCAACATCTTTCCT 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077,FBtr0084139 2 2 2 80 3R 17703106 17703193 GAGACTTTGAAGTGAAGTTGGT 58 17703234 17703252 CATCGCAATTGGGAATGGT 58 NA Drosophila melanogaster 61 slmb FBgn0023423 FBtr0084032 2 1 1 80 3R 16947845 16947863 CAAGATTGTCTCCGGACTG 58 16947719 16947801 CCCATTAGGGTCTTAACGC 58 NA Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083607,FBtr0083606 2 2 2 123 3R 14067615 14067695 TCACCTCGATTGTCTTCCC 59 14067510 14067528 AGTTGGAGACTCTTGTGGC 59 NA Drosophila melanogaster 61 CG14318 FBgn0038544 FBtr0083530 3 1 1 163 3R 13609575 13609665 CAATCATTGGCGATCAGCA 59 13609430 13609448 CATTGATCGTTCGCCTGTC 59 NA Drosophila melanogaster 61 CG31498 FBgn0051498 FBtr0083339 1 1 1 60 3R 12491088 12491106 GTTTGCGATTCTGCTTTGG 58 12491130 12491148 GAGTCGATTTCTCAACCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34276 FBgn0085305 FBtr0112471 3 1 1 81 3R 11752012 11752103 CAGAGTTATTCGATCAAACGCA 59 11752145 11752163 TGTAGAACCAATTGCGCAG 58 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 3 3 3 144 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239405 11239423 TGACGAGTTGCTCTGAGAG 59 NA Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0290335,FBtr0301943,FBtr0290334 1 3 4 83 3R 8344791 8344902 CTGGCGCATCTTTAAGGAG 58 8344726 8344744 ATGTGGACGCTGTTAAGGA 59 NA Drosophila melanogaster 61 Aos1 FBgn0029512 FBtr0082593 2 1 1 80 3R 8259274 8259360 GAATCTCAGAAACGCCTTCG 59 8259213 8259233 GATGTTCTTGGTTATCTCGGC 59 NA Drosophila melanogaster 61 CG10013 FBgn0038012 FBtr0082567 3 1 1 60 3R 8150396 8150415 GAATTAGCTCCAACACCCAG 58 8150438 8150456 ATTGCACGGTCTTTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10013 FBgn0038012 FBtr0082567 2 1 1 60 3R 8150396 8150414 GAATTAGCTCCAACACCCA 57 8150438 8150456 ATTGCACGGTCTTTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 3 2 2 151 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361424 7361442 TAATTCATGACCCGCTTGC 58 NA Drosophila melanogaster 61 SdhC FBgn0037873 FBtr0082372 1 1 1 101 3R 7035451 7035528 CAGGGAAATGTATGCACTCTC 58 7035370 7035388 ACCACCTTCATCGATACCG 59 NA InUTR Drosophila melanogaster 61 bocksbeutel FBgn0037719 FBtr0082105 2 1 2 137 3R 5415710 5415729 TCTACGATCAGCCGAATGAC 59 5415492 5415610 AGCATCACTGACACAGAGG 59 NA InUTR Drosophila melanogaster 61 CG8444 FBgn0037671 FBtr0081978 1 1 1 158 3R 5086477 5086719 TTTATAGCGGCCATCAATGC 59 5086840 5086858 TCCGTTCCAGTTGGTATCG 59 NA Drosophila melanogaster 61 CG8420 FBgn0037664 FBtr0081973 1 1 1 80 3R 5074147 5074556 AAATCATGAAGGGCTTCAAGG 59 5074596 5074616 GGAAGGATTGGTTATTCAGCG 59 NA Drosophila melanogaster 61 CG9636 FBgn0037556 FBtr0081806,FBtr0081805,FBtr0081804 1 3 3 80 3R 4068558 4068650 CAATAGCCGAGATCAAACACTG 59 4068499 4068520 CTTGACGATGCAAGAGAATCTG 59 NA Drosophila melanogaster 61 CG2943 FBgn0037530 FBtr0081765 1 1 1 80 3R 3730570 3730588 AGGGCATTCTGTTACTGGA 58 3730448 3730526 GATACATGCCATCAGCCAG 58 NA Drosophila melanogaster 61 Osi1 FBgn0037406 FBtr0078588 3 1 1 80 3R 1999687 1999706 GCTGAGATTAGTCCAGTTGG 58 1999748 1999968 TCACTGTCACCTTCTAAGCT 58 NA Drosophila melanogaster 61 CG14676 FBgn0037388 FBtr0078645 3 1 1 60 3R 1673516 1673537 GCAACTATCACAATCGTATCCA 58 1673558 1673576 GGTTCTGGGATGAGGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hd FBgn0086695 FBtr0078802 2 1 1 101 3R 1200099 1200179 CAGATGACTTCATCAAACTGCA 59 1200019 1200037 CATCCACTTGGTGTCTTGG 58 NA Drosophila melanogaster 61 CG14654 FBgn0037273 FBtr0078883 3 1 1 90 3R 593946 593964 CTCACAGACATTGGAGGCA 59 593874 593892 GAAGTCCGCTGACTAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14645 FBgn0040687 FBtr0078908 3 1 1 60 3R 161037 161060 GAAACAGGATTCATGGATAGTCTC 59 161079 161097 TCTCCCATTCCCATTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17454 FBgn0039977 FBtr0299868 1 1 1 108 3L 23708255 23709008 CAATTGCAACAAGTGGAGG 57 23709077 23709098 GTATCAAATCACGAGTAAGGGT 58 NA Drosophila melanogaster 61 CG32462 FBgn0052462 FBtr0078579 3 1 1 65 3L 22845607 22845625 CTACTCTACTGCGTGGTGG 59 22845560 22845580 GTTATAAAGCCGGAACTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7181 FBgn0037097 FBtr0078382 3 1 1 222 3L 21532497 21532518 AGAAGCATTCTAACCTTACAGC 58 21532220 21532238 AATGAACAAGGATGCAGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33284 FBgn0053284 FBtr0078291 1 1 1 60 3L 21117591 21117610 AAGTCTAGATTGCCAGTTGG 57 21117633 21117651 CTCCGTTAGCTCGTTAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5104 FBgn0037009 FBtr0078209 2 1 1 146 3L 20514554 20514572 AAGGGATTCGTCATCTGCT 58 20514681 20514775 CATGAGAAAGCAGGTACTGG 58 NA Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 3 2 2 149 3L 20021395 20021413 TAAGATTGTACTCGCAGCG 57 20021150 20021224 AGAGCTTCATTTGAGCAGTG 58 NA Drosophila melanogaster 61 CG7770 FBgn0036918 FBtr0074894 1 1 1 260 3L 19916969 19916987 TGAGTCGTACCAGAACCTG 58 19917298 19917400 TCCTTCTCCATGTTCTCCA 57 NA DesignRelaxed Drosophila melanogaster 61 CheA75a FBgn0036783 FBtr0075129 3 1 1 190 3L 18245231 18245310 AAATAAAGTGCGAGCAGTCC 59 18245463 18245481 GCTTGAATAGAGCTCCACG 58 NA Drosophila melanogaster 61 CG7484 FBgn0036745 FBtr0075184 1 1 1 80 3L 17647989 17648324 GGATACCATCAAGCCTCAG 57 17648368 17648386 ATTGCCTTGGCATATGTCC 58 NA Drosophila melanogaster 61 TMS1 FBgn0028399 FBtr0075389 3 1 1 81 3L 16408042 16408125 GACCAACTGGTACAAACCTC 58 16408169 16408187 ACTGGAGACGATCTTGACC 58 NA Drosophila melanogaster 61 CG32152 FBgn0052152 FBtr0075489 1 1 1 60 3L 16136267 16136289 CTTTCAATCTGTCATCCATCACC 59 16136229 16136247 GAGTACCAGGATTGTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34452 FBgn0085481 FBtr0299517 1 1 1 80 3L 15680214 15680237 CTAAAGACGTATAGTCCCAAAGAG 58 15680040 15680178 TTCTAGCATAAAGACCAGACCA 59 NA Drosophila melanogaster 61 Eig71Ec FBgn0004590 FBtr0075586 2 1 1 153 3L 15644934 15645031 ACTTGTCGATTGACACTCGA 59 15644800 15644818 GGGTCCTACGAGTAGTTCG 59 NA Drosophila melanogaster 61 CG7650 FBgn0036519 FBtr0075591 3 1 1 64 3L 15603155 15603173 TTGTAAAGGACTGGCAGAG 57 15603109 15603127 TTGACGTTCGGTTTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BobA FBgn0040487 FBtr0075673 2 1 1 99 3L 14939037 14939055 CAAGAACTCCAAGCCTTCG 58 14938956 14938974 CTCCAGTTGTTCGTTGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13484 FBgn0036406 FBtr0075780 2 1 1 67 3L 14045954 14045972 CAAACGTTGGCTTCTACGA 58 14045905 14045928 GGATTTGTTCTGGTAGAAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32086 FBgn0052086 FBtr0076147 3 1 1 113 3L 11576536 11576619 TTAACCGCAGATATGCCCA 59 11576441 11576459 GGTGGTTCTCACCTTCCTC 59 NA Drosophila melanogaster 61 aay FBgn0023129 FBtr0076457 1 1 1 60 3L 9417226 9417245 TTTGATATCAACCAGCCCAC 58 9417268 9417286 TTATCAGGGCGATAGCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 orb2 FBgn0035938 FBtr0076564 1 1 4 80 3L 8937611 8937928 GTTAATTTCATTTGCGGTGGC 59 8937551 8937570 CTGTTGTTGATGCTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 Cdc6 FBgn0035918 FBtr0076647 3 1 1 81 3L 8625526 8625547 AAAGGAGTTCAATATGAAGGCC 58 8625388 8625485 AGGCTTTAGAGTGTCTTGCT 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112693 1 1 15 80 3L 7656971 7656989 GATCCGAGATGCCCATACC 59 7656406 7656930 TTTCTTTCGTGAAGGGTTTCTC 59 NA Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 2 1 1 285 3L 6955049 6957515 TAAGTTGCCCATTTACGAGC 58 6954300 6954318 TATGTGCATGATGCTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 DopEcR FBgn0035538 FBtr0100185,FBtr0100186,FBtr0073337 2 3 3 103 3L 4369893 4369913 CGGTATACACCTTCATGTGGA 59 4369722 4369828 CATCCAGCATTGGCATCTC 59 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073064 3 1 2 147 3L 3320348 3320527 ACTTTATACGCAATCCCATTCG 59 3320631 3320653 CCTTAATCACGTTTCACTCTCAG 59 NA InUTR Drosophila melanogaster 61 CG1240 FBgn0035370 FBtr0072969 1 1 1 205 3L 2767028 2767046 CAACCCTATAGAGACGCCG 59 2767289 2767307 GAATTTCACGACGCAGGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acp62F FBgn0020509 FBtr0072943 1 1 1 60 3L 2739856 2739877 AGGACCTAAAGTTGACTGTACG 60 2739898 2739916 AGGACATGCTACAGGACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15820 FBgn0035312 FBtr0072913 2 1 1 85 3L 2173973 2174146 AGCAATGCATAAACGCCTG 59 2173906 2173924 CTCGATTGCCATACCAACG 59 NA InUTR Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072643 3 1 2 60 3L 1099133 1099151 GACTTGGAGATCAAGCCAG 57 1079663 1099112 AGGAACTTACCCTTTCTTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13877 FBgn0035112 FBtr0300710 1 1 1 80 3L 218188 218291 CATATGCACAGCTCTTGTGG 59 218334 218352 TGAGACTTAGGATGCGACC 58 NA Nonspecific Drosophila melanogaster 61 5SrRNA:CR33410 FBgn0053410 FBtr0086402 1 1 1 60 2R 15632695 15632713 ATACATCGGTTCTCGTCCG 59 15632653 15632671 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072143,FBtr0072142,FBtr0301411 2 4 4 82 2R 19832531 19832549 TATGGAAAGACAAGGGCGT 59 19832594 19833228 GTCCAGGAAGTATTTCGCAC 59 NA Drosophila melanogaster 61 CG2812 FBgn0034931 FBtr0072140 1 1 1 80 2R 19813673 19813691 ATACTGGCCACATCCTGTC 59 19813732 19813818 AGAAACGTATCGTTTGATCCTG 58 NA Drosophila melanogaster 61 CG34424 FBgn0085453 FBtr0112725 3 1 1 85 2R 19247386 19247406 TGACCAAGTGGAACATAAAGC 58 19247516 19247535 AATGAAGAGATCGATGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071961 1 1 4 90 2R 18957162 18957180 AAGATCTATCATCGGGCGA 58 18958174 18958196 GGGTCATGTTCTTGGTAATATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 CG15676 FBgn0034651 FBtr0071668 3 1 1 60 2R 17559700 17559720 ACGATATCGACTATCTGCAGG 59 17559738 17559760 TACAATACGGCTAGGTTCATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42362 FBgn0259708 FBtr0299961 1 1 1 285 2R 17552406 17552427 GCTTTGGATCAAGAAAGATCAG 57 17552726 17552744 TTCCTCGGTTTCATTTCCA 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG15666 FBgn0034622 FBtr0300455 1 1 1 80 2R 17231183 17231266 CCTTCTTAAGTACCAGAGGCA 59 17231305 17231326 GACAAATGCGATAGAACATGGA 59 NA Drosophila melanogaster 61 CG10073 FBgn0034440 FBtr0086523 3 1 1 80 2R 15271566 15271584 CTAGCTCCACCCAAATTGG 58 15271628 15271703 AGATTCGTCGTACATGCAG 57 NA Drosophila melanogaster 61 GstE8 FBgn0063492 FBtr0086676 1 1 1 60 2R 14295813 14295832 ATTTCATTGCCGGTGATCAG 59 14295853 14295873 GCGGTAATCGATGTGATTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5773 FBgn0034290 FBtr0086813 1 1 1 139 2R 13931083 13931101 CATTCAACATGGAAGGCCA 58 13930870 13930890 GAAACCATCGTCAGAGATCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300604 3 1 8 88 2R 13409395 13409414 TAGACACAGATTCGGGACTG 59 13408423 13409344 GAGTTTAGGACCTGAAGCG 58 NA Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982,FBtr0086981 2 2 2 80 2R 13001006 13001026 ATCGACAGCTTCCTAGTTCAG 59 13001063 13001142 GTAGAATTCCGATATGAACTGCTG 59 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087148 2 1 5 96 2R 12226693 12226960 CGTCCAATTTAGCTCAGGA 57 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 3 2 2 81 2R 11914689 11914709 GTGATCACCTTCAACATCCAC 59 11914550 11914649 GTTTAAGTTGTTCAACTGTGGC 59 NA Drosophila melanogaster 61 CG33463 FBgn0053463 FBtr0087301 3 1 1 86 2R 11783723 11783795 CAATGCTAAGGTTAATGGAGCA 59 11783658 11783676 AGCTTGCAACAATCCACTG 59 NA Drosophila melanogaster 61 CG30065 FBgn0050065 FBtr0087663 3 1 1 102 2R 9320793 9320811 ACTCGGAAACTTTGACCAG 57 9320936 9320955 GCCTAGTGCTTTGTAAAGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 2 2 2 96 2R 8828667 8828756 CAGTTGAGAAATCCGAGGGA 59 8828590 8828608 GTGAGATTTAGGCCCTGCA 59 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087965 3 1 3 105 2R 8213490 8213587 CTGGCATTTGACTACTGCG 59 8213403 8213421 CATATTGTTCGGCCTGTGG 59 NA InUTR Drosophila melanogaster 61 thetaTry FBgn0011555 FBtr0088162 1 1 1 60 2R 7229745 7229763 GCTACTTCTGGTGCATGAC 58 7229703 7229724 TCCACAATGTTGACATAGACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp12d1-d FBgn0053503 FBtr0089418 3 1 1 89 2R 7012516 7012535 CATCTTTATGCAACCCAGGG 59 7012382 7012464 CGGATTTCCTTAATGCGCT 58 NA Nonspecific Drosophila melanogaster 61 Rab3 FBgn0005586 FBtr0088257 3 1 1 82 2R 6611868 6612325 AAACTCCAGATCTGGGACAC 59 6611805 6611823 ATGAAACCCATCGCTCCTC 59 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214,FBtr0300578 3 2 2 118 2R 6602946 6603063 AGTTTATTCTGTTGGCTGTCTG 59 6603142 6603160 GTAAAGGCAGCTTTGACGG 59 NA Drosophila melanogaster 61 CG34221 FBgn0085250 FBtr0299834 3 1 1 187 2R 6085573 6085885 AAGCTGAAGATCCGAATACAC 58 6085406 6085424 AAATCGTCATCCTGGTCGT 59 NA Drosophila melanogaster 61 CG1773 FBgn0033439 FBtr0088467 3 1 2 122 2R 5594028 5594046 TTTCTCCACATTTCCGGTG 58 5594185 5594269 CACTCTTATCTCCTTAGATCGG 57 NA Drosophila melanogaster 61 CG12158 FBgn0040775 FBtr0088557 2 1 1 157 2R 5250344 5250362 TCTAATTCTGGCTGTGGGT 58 5250151 5250169 AGTTCTAGTTGTTCTGCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12376 FBgn0033323 FBtr0088706 2 1 1 80 2R 4591031 4591118 TGGCCATTAAAGCTTTGCT 58 4591159 4591180 ACATAGCATAAATGGCTTCCTC 58 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 2 3 3 92 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877559 3877638 GTCCCAAATCTTGACGGTC 58 NA Drosophila melanogaster 61 CG17985 FBgn0033199 FBtr0088946 1 1 1 80 2R 3542036 3542054 ACGAGAAACCATCGACGAG 59 3539850 3541994 CCATATTGGCTTCGTCATTCG 59 NA Drosophila melanogaster 61 Fmo-2 FBgn0033079 FBtr0086148 3 1 1 81 2R 2532046 2532064 CTAAAGGCCCACATCAAGC 58 2531873 2532001 GGTCCCATACGTAGACCTC 58 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 3 4 4 90 2R 1595875 1596127 CCGCTAACATAGATCTCAACAC 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 RpL38 FBgn0040007 FBtr0111120 1 1 1 135 2R 403814 403891 TGGATTAATATGCCACGGGA 59 403698 403716 AAAGGAACCTCGAACAACG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 mir-100 FBgn0064160 FBtr0081064 1 1 1 60 2L 18471449 18471468 CGTAAATCCGAACTTGTGCT 59 18471491 18471509 GACAGACTCCCATAATGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-525j FBgn0083029 FBtr0113555 1 1 1 60 2L 20421993 20422012 AAATAAGTAGACGAACGGCA 57 20422035 20422053 AAACACAAGTCATCTGCGA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 cta FBgn0000384 FBtr0111126 1 1 1 109 2L 22875226 22875244 AGTAAGGCTGCGTAGTACC 58 22875317 22883495 GCAGTTTAACCTGACGTCG 59 NA Drosophila melanogaster 61 CG3651 FBgn0032974 FBtr0085937 3 1 1 89 2L 22122172 22122262 GGTGATAAGGTGGAAAGTCCT 59 22122313 22122331 TTCAAAGGATGAGAGGGCA 58 NA Drosophila melanogaster 61 His4:CG33897 FBgn0053897 FBtr0091901 1 1 1 60 2L 21464057 21464075 CGTAATTCGTGATGCCGTG 59 21464015 21464034 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17571 FBgn0259998 FBtr0081376 3 1 1 60 2L 20256573 20256591 ATGATCAACGATGTGGCCA 59 20256531 20256549 GGATCTTAGAGGTCTGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 3 2 2 178 2L 20095776 20095794 AAGACTGGACTGGAGTTGC 59 20095936 20096017 TTGTCCTCGTTGTAACGCT 59 NA Drosophila melanogaster 61 CG17597 FBgn0032715 FBtr0081121 1 1 1 100 2L 18830450 18830548 ATGACCAAGTTTGAGAAGCC 58 18830369 18830387 AACTTGATTCCCGCATCCT 59 NA Drosophila melanogaster 61 yellow-b FBgn0032601 FBtr0080894 2 1 1 96 2L 16755953 16756979 TGATCTTAATGATACCTCCAGC 57 16757036 16757054 AGAAACCAATTCCGGTTCG 58 NA Drosophila melanogaster 61 CG15258 FBgn0032563 FBtr0080743 3 1 1 60 2L 15361555 15361576 ATTAACAGGGAAGAAGTTCCCA 59 15361516 15361537 TTATTTCACTCCTCAACTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18420 FBgn0028866 FBtr0080687 2 1 1 80 2L 14796074 14796161 ATACCACAATCGTTGTTCGTC 59 14796014 14796034 AGGTCCTATTCACTTGATGCT 59 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 3 3 3 105 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357596 14357614 TGTGTCCCAGATCTGTAGC 58 NA Drosophila melanogaster 61 CG14939 FBgn0032378 FBtr0080259 1 1 1 101 2L 11811655 11811673 CACGCTAGTCTACCTGGAG 59 11811478 11811496 TTTGAGGCGAGGAGAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42471 FBgn0259961 FBtr0300307 3 1 1 82 2L 11753874 11753948 AGTTTATTCCACTGTTTGCAGG 59 11753813 11753831 GAGTACGCTCGTTGTAGCT 59 NA Drosophila melanogaster 61 CG14921 FBgn0032345 FBtr0080227 2 1 1 111 2L 11121465 11121483 AAGTTCAACAATCCACCCA 57 11121252 11121270 TCTTAACCAGCACAATGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 1 5 5 80 2L 9537728 9537811 GCATATGGATTATTGCTACGAC 57 9537852 9537870 TTAGACTTGGTCTGTGGCT 58 NA Drosophila melanogaster 61 CG34366 FBgn0085395 FBtr0112591 2 1 1 100 2L 9381758 9384655 TCCTCAACTATTACAGAACTGG 57 9381679 9381697 CTGATTTGAGTCGAGTCCC 57 NA Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0302595,FBtr0079641 3 2 2 81 2L 8136755 8136775 GGACACAAAGTTCATCTGGAC 59 8136621 8136715 TGTGGAATCGTCAAGATTTAGG 58 NA Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079337 3 1 2 87 2L 6775820 6775838 TTTACGTACAGCTGACCCT 58 6775889 6775977 ATGCTCTCGTCAAACTTGG 58 NA Drosophila melanogaster 61 cort FBgn0000351 FBtr0079320 1 1 1 80 2L 6675692 6675771 GAAACTATCCAGTTCTGGACCT 59 6675633 6675651 ACTTGAAGAACAGCTTGCG 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 2 2 2 249 2L 6528791 6528810 TTCAACGAGATCGAGGAGTG 59 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Hsp60C FBgn0031728 FBtr0079112 2 1 3 98 2L 5662974 5668956 AACTAAAGGTCAACATGATGCG 60 5669015 5669033 CCTTTGCATAGTTACGGGC 59 NA InUTR Drosophila melanogaster 61 CG15630 FBgn0031627 FBtr0077418 2 1 1 113 2L 4737140 4737159 GGTAACACAGAATGACACCG 59 4736328 4737064 CAAATGGGCTTGTGTTCGA 59 NA Drosophila melanogaster 61 Taf12L FBgn0031623 FBtr0077420 2 1 1 87 2L 4701202 4701284 GCTACGATATTATCTCCAAGACC 58 4701137 4701156 ATATCGCAACCTTGATCGTC 58 NA Drosophila melanogaster 61 Acp24A4 FBgn0051779 FBtr0110767 2 1 1 76 2L 3693816 3693834 TTTCATCGCTCTTGCAAGC 59 3693689 3693707 AATTACCATTAGCGGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Spindly FBgn0031549 FBtr0301590 1 1 1 62 2L 3528913 3529071 TGCTGGATTTCTGCAAACG 59 3528869 3528887 GGATTCGCATGCTATGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3077 FBgn0031457 FBtr0077736 2 1 1 119 2L 2765344 2765362 GATGAGCTGGACAGTCCAG 59 2765158 2765176 GGTCGGCTTATACTCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 3 2 2 89 2L 1052391 1052410 CGCTCTACACAATCATGCTG 59 1052256 1052339 TCTGCAAGATCTCCAGCTC 59 NA Drosophila melanogaster 61 CG11562 FBgn0031247 FBtr0078130 1 1 1 95 2L 292642 292660 ATAAACAATCGGCAGACCG 58 292775 292793 GCAGCGTGTAGGTATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415,FBtr0078163,FBtr0078164 1 3 4 80 2L 28234 28744 GAGATATTCCTGGCGAGCT 59 28172 28193 TTAGGTCATTAACGGAATCGTC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089428 3 1 10 95 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111110 111919 TTGAAATCGAAACCTGGTCAC 59 NA Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121 3 2 3 80 2L 199736 200132 CCAGTCTGAATGATTCTACGT 57 200173 200192 CACCTCGCATTAAATGATGC 58 NA Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0301439,FBtr0078001 1 2 3 80 2L 756016 756034 AGAACCTCATCGTGGTCTC 58 756075 756683 TGAACATGTGATTGTTCAGTCC 59 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 2 3 3 84 2L 862618 862637 ATTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 3 4 4 80 2L 872015 872035 ATCGCCTCAAGATAAACTCAG 58 872076 872222 CTAGAATGCGTACACCTTCG 58 NA Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 3 1 1 60 2L 1352713 1352733 GCTATTGCATCTTCGATCTGG 59 1352617 1352636 GCCCTCTTATAGACATGACG 57 NA DesignNoJunction Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 3 2 2 80 2L 2134953 2135043 TCAACCTCAAGTTCTTCAACG 58 2135085 2135103 GGACACGTGAGATGTTCTC 58 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077772 3 1 5 105 2L 2450312 2455062 CAGGAGTGTCAGATAGTTGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 2 4 4 60 2L 2768915 2768934 AAATCAGTACTGCCTCAACG 58 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 3 3 7 117 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962662 2962680 GGAATTCTTCGGAGTGGTG 58 NA Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 3 2 3 146 2L 2995063 2995446 TCCTTCAGACGAACATCGA 58 2995556 2995574 CATCAAGTATCCGTTCGCC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 2 5 6 91 2L 4307446 4307566 TACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 3 2 3 81 2L 4879192 4880392 CTCGCATACATACAGGAGAG 57 4879130 4879148 TGCTTGGTCAGATAGTCCT 57 NA Nonspecific Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 1 4 11 86 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 3 6 6 62 2L 5041693 5041712 AGCCTGGATATTAAGGTCCT 57 5041501 5041519 TCTTCAAATCGATCAGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707 1 1 5 90 2L 5155842 5187619 AGCAACAGGATCTAATTACGC 58 5187671 5187689 CTGCTCTGGTTCATGTTGG 58 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 2 3 3 100 2L 5307903 5308029 GCTTCTAACTTGCATCCGT 58 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 1 3 3 80 2L 5533672 5533691 CTGATGACTCAACCAAGAGC 58 5533732 5533812 CAGTCTGGGTGTTACTATGGT 59 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 3 3 3 185 2L 6049339 6049424 AAGAAACAAGATGCTCGGC 58 6049573 6049591 CTCGATCCGAAGTATCCGT 58 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 2 3 3 184 2L 6049171 6049190 CAACTACTGCTTCGAGATCG 58 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300038,FBtr0079249 1 2 3 194 2L 6329690 6330134 GACTTCCGGTTCCATATCGT 59 6330291 6330309 CAGGGACTGTTCAAGTTGC 59 NA Drosophila melanogaster 61 mmy FBgn0259749 FBtr0079269,FBtr0079268 2 2 2 81 2L 6471356 6471374 GATCAGCAACGGACATGTC 59 6469925 6469943 CATTCCCTTGGGATGATCG 58 NA DesignNoJunction Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 3 5 5 82 2L 6791572 6791590 TTGATCTGGTACAAGGGCA 58 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 1 5 5 81 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 2 5 5 80 2L 6961942 6961960 AATGGAATCGATTCAGCCG 58 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612 1 1 3 146 2L 7132843 7132861 CATCAATTGCAGTTGCTGG 58 7118915 7132736 AGCACTTACATCATTATCCTCC 57 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 3 4 4 80 2L 7649008 7649026 GAGGACTTAGTCCTTTGCG 58 7648878 7648967 CGGCTTAATTGTACTGAAACAG 58 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0079492 1 1 3 128 2L 7805160 7805178 GTCAGGATGACACAAACGG 58 7804909 7805068 CTGTTCGCTGCTATTGCTG 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 3 4 5 61 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896701 7896719 CAATCCAAGAACAGGACCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17292 FBgn0032029 FBtr0079649,FBtr0079648 3 2 2 92 2L 8372744 8372891 TATATTATGGACCCACGGTGG 59 8372945 8372963 TCTTGCCCAAATCCAAGTG 58 NA Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 1 2 2 96 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380310 8380451 TTCTCAGTGGCATAACGCA 59 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079680,FBtr0079679 3 2 3 133 2L 8482609 8482627 GTATCGGGACTATTACCGC 57 8482724 8483141 ATGAAGATGCATGGATCGG 57 NA Drosophila melanogaster 61 d FBgn0086896 FBtr0079678 1 1 3 137 2L 8487674 8487755 CATTTCTGTACCACGCCTC 58 8487855 8487874 TGCTGAATGATCTTCTGGTC 57 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 2 3 3 80 2L 8939010 8939121 GACTTCATGCAATCTATGCTAGAG 59 8939160 8939178 GTTCACATTGGCGGATAGG 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 2 5 5 80 2L 9537734 9537817 GGATTATTGCTACGACAAATGC 58 9537855 9537876 TGTTTCTTAGACTTGGTCTGTG 58 NA Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 1 2 3 116 2L 9685192 9696198 ACATCAGCCATTTCCCTCC 59 9685094 9685114 CGGATTTCAAATCGTCTTCCA 59 NA InUTR Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 1 3 3 80 2L 9957836 9957854 AGATTCTCAGGGAGCAGAC 58 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 3 5 6 101 2L 10399596 10399614 AAATGCATCAGGGAAAGCA 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 2 2 3 81 2L 10581364 10581435 TTCTTTCGCAAGCACACTC 59 10581301 10581320 GAACCGTTCCTTGAGTTGTG 59 NA Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 3 2 2 80 2L 10766272 10766405 CAGACTGTAATCCAGCCGA 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0080203 1 3 4 137 2L 11237095 11237113 CAGCATCCACTCACAAGGA 59 11237213 11237367 CAGTTCGTGTTTCGGATTGG 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091682,FBtr0091679,FBtr0091683 3 3 5 70 2L 11278443 11278461 ATCTAACCATGCAGCTGCA 59 11278584 11278602 CATGTCGATCTCCTCGTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 5 6 100 2L 11835158 11835176 GAATATGTCGTTCACCGCC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089573 2 1 3 90 2L 11987378 11987704 ACTCGGATAGTTCCGACTG 58 11987306 11987324 CGATTGGACGATTCTCTGG 58 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 3 2 4 95 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404097 12404115 ATCGGAAGCTTCGAATTCG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 1 2 8 164 2L 12536412 12536430 GACCTTGACCGATGAACAG 58 12477158 12536285 CCAGATGCACTTTCAGTCTC 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 3 2 8 187 2L 12477157 12536283 GACTGAAAGTGCATCTGGA 57 12458097 12458115 TGTTCGACTTGAGAATGCT 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 2 2 17 136 2L 12727107 12729939 TTTGGCCAAGTGCTATCCA 59 12730038 12730057 AATGGCGTTGTATCGAACAG 59 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 2 3 3 247 2L 12976592 12976610 CTACAAGGTCGACGATGTC 57 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 3 2 2 88 2L 13351986 13352004 CAAGTATCTGGCACTGGTG 58 13351826 13351937 GCTGATTAAGTGATCCAATGAG 57 NA Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 3 1 1 99 2L 13436749 13436768 TAACGCTGCTGGATCTATCC 59 13437958 13437976 GAGTTCTTGTTCAGACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886 2 1 5 86 2L 13578246 13609800 GAGTTCGCTGTCATGAACG 59 13609850 13609868 TGTGACTAGCTCGGATGTG 59 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0110941 3 1 3 98 2L 13785723 13785802 TCAAATAAGCGTAAGAATCGCG 59 13785861 13785879 GACGAGAACCACGTAGACC 59 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 3 5 5 80 2L 14189225 14195743 GAGCTAATGAGCTTGAACCT 57 14189164 14189182 GAAGCGTCGTATGAGACTC 57 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 3 2 4 97 2L 14639763 14688477 GAATGCAATAGGCGAACCT 58 14636101 14636119 CTAAAGTCCCAATCTGGCG 58 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080777 2 1 5 179 2L 15730825 15731009 TTGAAATGGACCCTGAACTC 57 15730665 15730683 GTGAGCTACGTATGCTGAG 57 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 2 3 4 80 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313385 16313403 AACTGTCATGGGATTGCCA 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080940,FBtr0080942 2 2 3 149 2L 16724973 16727010 TAACAACGAATACATCCAGTCG 58 16724781 16724863 AACTGGTATTGCACCTGGA 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 1 5 16 80 2L 16769278 16770465 TAAGCTCATCTACACCTACTCC 58 16770506 16770524 CAACGGTTGGTATACACGG 58 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 2 3 4 80 2L 17415383 17417583 TACCCGAATCCAGAACTCC 58 17415321 17415339 CATGAGACTGCGCTTTAGG 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 2 4 12 87 2L 17715906 17716688 GTTGTTATCCACGTGACCG 59 17715837 17715855 AACTCAACATCGACATCGG 58 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 1 2 3 95 2L 18965177 18965270 GATGAATGCGAGATTGCAC 57 18965100 18965120 TGACAATAGTGCAATCGAGAG 58 NA Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 1 2 2 99 2L 19506352 19507499 AGCACTGGAGGTATTTCGAC 59 19506272 19506290 TGATGATCTCCGTTGCCAG 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 1 2 5 183 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339314 20339332 CATATTCGATGGGAGTGCG 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 2 2 5 195 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339325 20339344 AGGGTGTCAGCTCATATTCG 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 3 2 5 196 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339325 20339345 TAGGGTGTCAGCTCATATTCG 59 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 3 3 3 181 2L 20687404 20687422 GATCGATGACACCAAGCTG 58 20687058 20687259 CATGGCGTTCTGTGATCAG 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 2 5 7 80 2L 21121223 21121590 CAGAGATCTTAAGGGAGCTGAG 59 21121628 21121649 CTCATAACTTCCATAGCATCGC 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503,FBtr0301276,FBtr0081504 3 3 3 80 2L 21137683 21137770 TGAACAGATCTTGGACAAGG 57 21137622 21137641 TCGTCCTTATCAAACGACAG 57 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 3 2 5 123 2L 21670623 21670642 TCTACTGAACTTACACCCGT 58 21670466 21670537 CTATTAACGATCGCACCGT 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0085902 1 1 4 158 2L 21717653 21717672 CCTAATAGCCACGTTAACGG 58 21719634 21720131 CGGTTCAACATCGTCTTCC 59 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0085910 2 1 3 157 2L 21756617 21757172 CAATGCCAGAACTTACACCG 59 21743897 21743915 GGAATGCTTGCAGTCTTCG 59 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111268 1 1 2 86 2R 130194 130273 TTGAGGAGAAATTCGAGCG 58 130126 130147 GTGACAACATATCATGCATCTC 57 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 3 3 6 103 2R 2039490 2039582 ACTTGATGTTACCGAGGACTG 59 2039407 2039425 TGTAGCTGTGATTCTGCGA 59 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0086136,FBtr0301420 3 3 7 81 2R 2620751 2625475 GTTCTGTTCTACGACAAAGACC 59 2620691 2620709 TCTGATCGCACTCATCGTC 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 3 3 3 159 2R 3106665 3107971 GATAACGAGGTTCGTTACTGTC 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111089,FBtr0111077 2 3 59 90 2R 3219878 3223231 GAACGTCTACGTACCTCCC 59 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 2 2 5 86 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575726 3575746 CCTTTCGTCTCCAATTTGACC 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 3 2 4 146 2R 4757938 4758092 TTCGATGGACACAATGTGAC 58 4759738 4759756 GTCCATCAGGAGTTCTCCG 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 3 2 2 80 2R 5051521 5051598 CGATCTTACAGGATGATTGCC 59 5051461 5051482 GTATGCATAACCAGAACCAAGG 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 1 3 3 85 2R 5076504 5076583 GTACTTCATGTTCTACAACACC 57 5076440 5076458 CAAGCATGTTCATTGTGGG 57 NA InUTR Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299917,FBtr0299916 3 5 5 99 2R 5397419 5397437 ATGGATGAGCCAACCAGTC 59 5397500 5397734 AGCGGGTTCTTGGATAGTC 59 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122,FBtr0112672,FBtr0112673 1 3 4 80 2R 5465736 5465754 TTCGAAATCTGGTCAAGCA 57 5463874 5465692 CGTGCTCTTTAACGAACTG 57 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088522 3 1 3 109 2R 5467332 5467478 AAGTTCCAATCCAAGAAGCTG 58 5467547 5467567 GTGTAGTCGTAATCGAATCCG 58 NA Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 3 2 2 81 2R 5471135 5471153 CTGCTAAAGAACCAACCCA 57 5471017 5471092 CAGGATCTGTAAGGATTTCCC 57 NA Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0088492 3 1 2 80 2R 5708989 5709010 AAGTTTCAGACAATCCTAAGGC 58 5708873 5708949 TGACACATGAATCTCCAGGT 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 3 3 5 85 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884050 5884069 CTCGTAGTCGTCAATGTTGC 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 3 2 3 80 2R 5919132 5919151 TGTCTACTGCCTGTATGTGG 59 5918911 5919089 GCATTTAGCTGTCCTGCAC 59 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088363 2 2 4 149 2R 6138088 6138399 CTCATCATCGTTCTGGTGTC 58 6137958 6137978 CGTACACAAACGTGTTAAACG 58 NA InUTR Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 1 2 2 80 2R 6226464 6226546 GCTGGAGAACATGTTTAATGAC 58 6226405 6226425 GATAGAATGGTCAACTGCTGG 58 NA Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 2 1 1 212 2R 6308281 6308299 CGTTGGATGTTTGACAGCC 59 6308029 6308052 CTACCATTTCTGATTCGATGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313 2 2 3 81 2R 6343082 6343100 CCTTATTCGGAAGTACCGG 57 6342946 6343040 TGTATGTTCCTATTAGTGGAGC 57 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0088088 2 2 4 129 2R 7532454 7532917 TCCCAAACATTCCTAGGCG 59 7532260 7532362 ATTTGCATACCTGTGCACAG 59 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 3 2 2 81 2R 7837687 7843102 TATACAAGGAGCACATTCAGG 57 7843145 7843163 TCGAAGACGATCACTTTGG 57 NA Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 1 1 1 286 2R 8113209 8113228 ACTGTACAATGGCTTTGGAG 58 8112483 8112505 AAGCATAGGGATTACAGTAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0087899 2 1 2 178 2R 8222881 8222964 GCTTGAAGACAACCATTGGG 59 8223102 8223123 ATGGATATGCTAAATCAGGGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 3 1 1 71 2R 8282205 8282224 TATCATATCCCTCGACACCT 57 8282316 8282334 GTTTGTCGTATAACCGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 3 3 3 93 2R 8527411 8527429 TAGAGGATCGCTTTCTGGT 57 8527486 8527565 GGAGAAGCTCTTATAGCCG 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 2 2 8 96 2R 8561427 8563642 ATAATGCCAAGCTCAGTCAG 58 8560791 8560809 GCGAACATGTCGAATAGCA 58 NA Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 3 1 1 113 2R 8816812 8816831 AGCGATTTCGTATGCAACTG 59 8817349 8817367 GTAGAGTCCGTCTGTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 2 4 4 80 2R 9074417 9074493 TCAGTAAGATCACGCAGGA 58 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 Aats-val FBgn0027079 FBtr0087734,FBtr0087735 1 2 2 80 2R 9089462 9089480 CACGGAGGAACTTTACCAG 57 9089523 9089606 GATGTATTGCTGGGATAGCT 57 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 2 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114539 9114557 CCGTTGAACTCATTGTCCT 57 NA Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087700 3 1 2 80 2R 9378989 9379011 GAGGCTCAGTTCTCAATTATAGC 59 9377370 9378950 GATTGGTATCTTGGTGAGCC 58 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672,FBtr0087673 1 2 2 81 2R 9409615 9409829 CAGACTGAGAGGCAACTACC 59 9409873 9409891 GTCCAGGTACTCCACACTG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087621 3 1 15 122 2R 9771691 9771709 GTCTAATCGATGCCACCGA 59 9770040 9771605 CGAATACTGCTTGCCTCTG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273225,FBtr0087618,FBtr0087619,FBtr0301592,FBtr0273226 1 5 15 200 2R 9805406 9809060 AGTTTAAAGACGAACGCGA 57 9804490 9804508 TCTGCAGCATATGGAAACG 58 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 2 3 3 80 2R 9835604 9835689 CGTGCCAGATATCATCTGGT 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451 3 1 4 103 2R 10058942 10059798 TTTACCTCGGCATAGGTGC 59 10059864 10059883 ATATGCAGGGTACAGAACCC 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302294 3 2 4 80 2R 10752554 10752687 GGGAAAGTCTGACAAATCCAG 59 10752494 10752514 GAATCGTCGTTGACTTTAAGC 58 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 2 3 5 122 2R 10793452 10797740 TTGATGTGGCAGATTCCTG 57 10793348 10793366 TTTCATATTGGACCTCCGC 57 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 1 2 6 80 2R 10834799 10835161 ATGGATTGGGAATTGATAGCTC 58 10834740 10834758 TGTCACATAGGGATCTCCC 57 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110998,FBtr0110995 1 2 6 126 2R 10836921 10838201 GGAGCATCGTTATTTCCCA 57 10836442 10836460 GGAAGATGTGTCCGTTGAC 58 NA Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 2 1 1 117 2R 10840592 10840610 CCAGCTGGATAGTCCACAG 59 10839975 10839993 CCTACTGTGCATCGATACG 57 NA DesignNoJunction Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 1 2 3 80 2R 11269847 11269865 AGGACCAGGAGCTTATGGA 59 11269908 11270916 GGTAGCGATCATGAAACAGG 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 3 4 7 93 2R 11652754 11660561 AATAATGTGTACCGAGGTGC 58 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087095,FBtr0087096 2 2 5 88 2R 12442681 12442699 TATTGAGAAACGCTGGCGA 59 12442745 12443120 CATTAGAGGTAGTTGTTTCTGAAGG 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 2 3 6 198 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678300 12678318 CTCGGATCAAGTTCCAGGT 59 NA Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 3 2 2 129 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885786 12885806 CTTCCATATCTGTAGCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971 3 2 3 130 2R 12922399 12922420 GCAGGAGAAACTAAATCTGGAG 58 12922511 12922866 TAACAGTCGGTGCATCCTC 59 NA Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 2 2 2 87 2R 13300526 13300544 AATTGGAATTTGCACGCCA 59 13300653 13300671 CTTCTCCACAGTACTGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 1 2 3 80 2R 13359057 13359075 CAACAATGTCTTGGGTGGC 59 13359118 13359207 TGTGAGCTCCTATAGCTGTG 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 2 2 3 80 2R 13359115 13359204 CATCACAGCTATAGGAGCTC 57 13359244 13359265 CAATATGGACATCACTTTCTGC 57 NA Drosophila melanogaster 61 CG30104 FBgn0050104 FBtr0086928,FBtr0086927 1 2 2 80 2R 13378860 13378937 CGGATGCTATATCCTTGGG 57 13378981 13378999 GAAAGGTGACCTCGTTGAG 58 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 1 5 5 172 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400427 13400445 CTCAGAGTGGGTCAGATCG 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 3 2 8 82 2R 13408429 13411602 CTCGAATCTAACCGGTCCT 58 13408365 13408384 AGTATTCAACGGCATTCAGG 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300540 1 1 7 195 2R 13727108 13727126 GGATCACATACTGGACCAG 57 13727285 13728261 GCAGTAATCCGCATTTAGC 57 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 3 2 4 80 2R 14018829 14018848 AAACACTGAAGGATCTGCTG 58 14018532 14018789 GATCAGAGTCGTTAAACAGACC 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 1 5 5 80 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042924 14042942 TAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 2 3 3 84 2R 14181661 14181776 AATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 2 4 4 81 2R 14529689 14529707 CGAGTTGCAGTTGATTGGT 58 14529562 14529647 GTGGAATGATTGCATAATGCTG 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299943 1 1 4 80 2R 14645177 14645197 TCCAACTATCCCACTGTTGAC 59 14645017 14645135 AGTGGGTGAACCAATAGGG 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 3 6 6 111 2R 14707946 14707964 GTGGACTACGACGAGAAGG 59 14708039 14708119 GTAGGGATACCTGCTGACG 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 2 4 6 91 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086318,FBtr0086317 1 2 3 80 2R 16143435 16143455 TACATAATGATCCGCCAAAGG 58 16143299 16143393 CCCAGGGTTTCTCATTCTG 57 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 3 3 3 101 2R 16148164 16148183 GTTTGCCAAGAAACTGAAGC 58 16148245 16148325 GCTTCGTTGGATAACATTGTG 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 1 2 5 84 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212361 TGAATGGAGCTAGCCATCTC 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 1 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485964 16485984 TCTATATCCGCCGATATTTGG 57 NA Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245 3 1 2 98 2R 16552567 16554438 CACCTGGTGAATACAAATTTCG 58 16552490 16552510 CAGAGTCTTCACGAATTTCAC 57 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397 1 1 2 86 2R 16876696 16876716 TGCTGATTACTCCATTCTCGA 59 16876252 16876649 TTCATCTGCTTGTGAACACC 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600 2 4 5 176 2R 17202259 17202341 TATCTGGAAAGACCCGACAC 59 17202480 17202498 CTTAGGCTCCCAAGTGTCC 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 2 2 4 84 2R 17222090 17224945 GTAATCAGGTCTGGATATCGC 58 17225052 17225070 TCGTTATCGTTGTCTTGCG 58 NA Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 1 2 2 80 2R 17375565 17375584 CACCACCAATGTGTTCAAGG 59 17375331 17375526 TTCTTTAGATACTCGCTGACCTC 59 NA Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 3 2 2 80 2R 18778566 18778646 TATAAAGGGATTCCTGAGCCA 58 18778687 18778706 ATCTCCATTAAGGTGTGCAG 57 NA Nonspecific Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 3 3 3 101 2R 19278839 19278920 ACAACAAGGCTTCCATCTG 58 19278756 19278774 AATTCGTCTTGCGTATGGC 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072239 1 1 2 108 2R 19703115 19705583 GTGTCGAAAGAGATGACGAG 58 19703026 19703044 TTCCTGGAGCTATAGCTGG 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 3 4 4 80 2R 19940648 19940730 GATCTAATAGTCGGCATCGGA 59 19940588 19940610 GTACGAAATGATCTCCAGTAGGT 59 NA Drosophila melanogaster 61 CG16786 FBgn0034974 FBtr0072248,FBtr0072247 2 2 2 100 2R 19971017 19971038 CTAACTCAAACTGTCTATGGCT 58 19971096 19971184 GATTTAAGTTCAAAGGCTGGAG 57 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 1 2 6 89 2R 20819715 20819787 GAAGCGATTCATGATCCGC 59 20819644 20819662 GACTTAAAGAACCAGGCGC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 1 3 3 101 2R 20920194 20924125 CTCAATGCCGCTATTCAGC 59 20924184 20924208 CATCAGTTGATTTATAAGGGACTCC 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 1 2 4 125 3L 452934 452954 GCGATCTTCTATTTCAAGCAC 57 451763 452847 TTTCAGTATGTCGCCTCCA 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 2 6 6 80 3L 998874 998893 CGAATACATAGTCAGTGCCC 58 998721 998833 AAGTTACTCAGATCCAGACGA 58 NA Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 3 2 2 127 3L 1253219 1253309 CGAGTTCGATAGAGAATGCC 58 1253399 1253417 TCTTCTCCTGGATGAAGCG 59 NA Nonspecific Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 2 3 3 60 3L 1255001 1255021 CCATGAAGGGTGTCAATTTGG 59 1255042 1255504 CAGGTCTTGTAGCAAACCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 metl FBgn0035247 FBtr0072814 3 1 2 93 3L 1638909 1638928 GTGTTCGAGTTTAACGCCTG 59 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072784 3 1 2 81 3L 1822028 1822047 GCAAATACAATGCGAAGACC 58 1822090 1822404 AACTGCTGCAAATAGTTCCA 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 1 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 3 1 1 116 3L 2595893 2595914 TCACGATGAGAATATTCTCGAG 57 2596047 2596065 CTCTTGGCATACTTGGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 4 5 116 3L 2604269 2607701 AACCATCAGAAACAACGTGG 59 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072994 3 1 15 89 3L 3078042 3083748 TGTATACGGCTGCTATGGA 58 3083798 3084817 TCTGTCGATTCATATAAGTGGC 58 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 3 3 3 111 3L 3168164 3168182 GCACATGATCTGTCCATCG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017 2 1 4 109 3L 3350329 3351509 ATCGTTGGCATCACAATATGAG 59 3351579 3351597 CGAACTTGATGATGCCGTC 59 NA Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 1 2 2 82 3L 3463217 3463235 AGACAGACTTGCCTACAGG 58 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 2 6 13 129 3L 3578466 3593333 ATTGCAGATATGGAGACTGG 57 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 CG10855 FBgn0035461 FBtr0073185 3 1 1 60 3L 3805821 3805842 GACATTAAAGCTCCTGATCAGG 59 3804726 3804747 TCTTCTCTTGTATCAAACGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 1 2 3 176 3L 3961677 3961695 GAACATCTGGAATGGTCCG 58 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 2 1 1 200 3L 4115428 4115446 GTGCATGGAGAACATCTCG 58 4115084 4115102 TTCCTCACATTCTTGTCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 1 3 3 149 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552225 4552246 CGTCTACCCAGAAGTATTTGGA 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0112634 1 1 2 80 3L 5424825 5426126 TGGGTGGCTATAAGGTTGC 59 5426167 5426188 GTATCCTTGATATCACATGCCG 59 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 3 2 2 87 3L 5503270 5503288 TTACATGCTGATACGCAGC 58 5503097 5503221 GCGCATCCTATTGAATATCGA 58 NA Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 3 2 2 91 3L 6734865 6734883 ATCATGGTGGGAGATACCG 58 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 2 5 5 99 3L 7333783 7333801 CAGAGATCGCATGTACGGT 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 smid FBgn0016983 FBtr0076851,FBtr0076850 1 2 3 132 3L 7375822 7375895 GCAAAGAAAGTAGCTAAACCG 58 7376047 7376065 TACGGTGATCTTTGGAACG 57 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 1 3 4 91 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 3 2 2 83 3L 8670530 8670551 AACTCAAGACTCTGATTCTGGA 59 8670732 8670750 TCTTCTCCAGAATGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 3 2 4 106 3L 8738137 8738155 AAATACTCCTACCGTGCCA 58 8737418 8738067 AAACGGATCTTGTCCTCCA 58 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 1 4 5 161 3L 8770403 8775651 AATGCACCACAAAGCATCG 59 8778117 8778135 ATTTAACTGCGTTCGCACC 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 1 5 7 88 3L 8902026 8902097 TGGAGTGGTTAGTTTGCCA 59 8901956 8901974 TGGACTCGCTGCTAAATCC 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0076526 1 1 5 92 3L 9069977 9069995 TTCGACGCTTTCTTGTCCT 59 9070049 9077594 GGTGTACAATGATTCCAGCAC 59 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 1 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 2 2 4 128 3L 9346990 9347008 TCGGACGTTTCATTCAGGA 59 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 3 2 4 129 3L 9346990 9347009 TTCGGACGTTTCATTCAGGA 59 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 2 4 12 114 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 scramb1 FBgn0052056 FBtr0076303,FBtr0076301,FBtr0076302 3 3 3 80 3L 10214543 10214561 GCATCAATTTCCCACTGGA 58 10214220 10214500 AGAACATGGCATCTATGAGG 57 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 3 1 2 119 3L 10405982 10406000 AGCCTCCAATACGATTCGT 58 10406143 10406161 CCGAGAATTCCATTTCGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tna FBgn0026160 FBtr0301658,FBtr0076267,FBtr0112923,FBtr0076268 1 4 4 114 3L 10865189 10865267 CAGAATCAAGGTTTCCAGCA 58 10865344 10865362 GCTTGATATCCGGATTGGG 58 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 1 4 5 125 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109442 11109460 GGAGTCTGGAACAGATCCT 58 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220 1 1 2 129 3L 11138437 11138458 GAAAGAAATCGACAAACGACTC 58 11137497 11138348 AAGTATCAACTGGGTCTGGG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 1 3 5 126 3L 11219784 11219803 CCTATGATCCCATGAAGGCA 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 3 4 4 80 3L 11518601 11518687 GGCAACAGAACGTACTTATGG 59 11518541 11518563 CATCACATAGTCGATGTACTGTG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 3 5 5 117 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694509 11694589 GCTGTCATTTACATGCGAG 57 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0076058,FBtr0076059,FBtr0076060 2 3 4 89 3L 11992087 11993381 ATGCGTGAGATGTTCTTCG 58 11992016 11992034 GCCATTGACGATGAAGGAG 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 1 4 6 118 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010 3 1 2 82 3L 12266716 12267117 ACTTCCCATCGTCAGATGAG 59 12266653 12266671 AATCTTCTGGAAGGGCGAG 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 1 3 4 87 3L 12558038 12558056 TAATTACCAGGAGCTGGCC 59 12534466 12541585 GTGTAGAGCGGTATAGCCC 59 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 3 2 2 98 3L 12763428 12763502 CATTACAGCAAACCCAGGA 57 12763348 12763366 CAGTAAGCGAGAGTTTGCT 57 NA Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 3 2 2 89 3L 13035388 13035406 TCACCAAGATCGTCATGCA 59 13035458 13035550 TGATGACATCCATGTAGCCA 58 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 3 3 3 82 3L 13222208 13222227 ACAAACTAGCCACGAATTGC 59 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 3 5 5 120 3L 13475358 13475376 AGAAGGAGTACGCCTACCT 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428 1 1 7 80 3L 14410289 14431539 TAATCGCTACAGGGATCTTGG 59 14410229 14410247 TTGCTACTGGCGTTAATGC 58 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299650 1 1 3 80 3L 14729225 14737298 AGAGCGATCAGAATCTAATGC 58 14737338 14737358 CTATGACCGTGGTTACAACAG 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636 1 1 3 147 3L 15101926 15101944 ATTGTGCTCAATGTGGAGC 58 15102055 15103930 AAACGTAAACCTCGCTTGG 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 3 4 4 62 3L 15486595 15486615 TGATCAGTTTGTACTAACGCC 58 15486415 15486571 TCCATGATGGACATGCCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 2 2 2 89 3L 15529542 15540981 CCGACTTAGATCCGGAATCC 59 15541033 15541051 TGACGGTGGGATCTTTGAC 59 NA Drosophila melanogaster 61 CrebA FBgn0004396 FBtr0075557,FBtr0075558 3 2 2 95 3L 15541177 15542657 AAGATCGAGGACATGGACG 59 15542716 15542734 GAAGGTGAGGTACTTGGGA 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 1 3 12 161 3L 16895016 16895038 GAGGAAATCGAACTAGAAAGACC 59 16895158 16895237 TTCTTTGTCCAACTGCTCCT 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 3 5 7 81 3L 16952971 16954604 TCAGGAGCTACCAGATTCG 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075292 1 1 2 80 3L 17014629 17014807 AGTACACTATGCTGGACAAGG 59 17014569 17014588 ATTCCGACTCCATCACATCC 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 3 2 2 83 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330774 17330855 GGAATATTATAGCTGCATCGGTG 59 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 1 2 2 83 3L 17365247 17365329 CTACTGATTTCGGCATTCCTC 58 17365184 17365202 AGATGGGCCGTTGATTACC 59 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205,FBtr0075206 1 2 2 81 3L 17548081 17548099 GTCGTCTTCCTCCAGTCAC 59 17547962 17548037 CTGCTTTGACTTGTGATCCG 59 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 3 2 4 163 3L 17558812 17567900 GCGATATTACACCGAAATTCCT 59 17558670 17558689 TTTGCTCCGTCTTTATGTGG 58 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 3 2 2 84 3L 17746620 17746638 TACTACAAAGCGCTGGAGG 59 17746405 17746573 CCATGTCATATAGCGTGGGA 59 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 3 2 2 208 3L 18033743 18033761 TTACGTATGTCCTCGCAGG 59 18034086 18034107 TTGAGAATATCCAACTCTGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 1 2 2 83 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913036 18913114 GATCTTGCGCTTATCCATGG 59 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0074920 1 1 2 84 3L 19890505 19902357 CCACAAATCCATGCAGAGTG 59 19890440 19890458 CTGTGCAAGCGTATACGTG 59 NA InUTR Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 2 3 4 104 3L 20253578 20253970 GATGAGAACGCTATCCGAG 57 20254038 20254056 GTTCTGGAAGATCTGCCAG 57 NA Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 3 2 2 84 3L 20311906 20311983 TTTCTGAACATCACCACTTCC 58 20312027 20312047 AGTTGTTCTTGATGGGATACC 57 NA Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 2 2 2 80 3L 20439849 20439867 GAGGTCAGAACAATGCCTG 58 20439911 20439989 CGTTGATAAACTGACCGCC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0078332 1 1 4 102 3L 20959003 20959239 AGCTGGATAAGGAACAAGGA 58 20958920 20958939 TGAAACGAATGGGTACATCC 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678,FBtr0112677 2 3 3 125 3L 21326357 21326461 TTTAATAGGCAACAAGGCCG 59 21326549 21326567 ACATTGAGTCCCGTCTTGG 59 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 3 2 2 80 3L 24247008 24251599 GGTTATATTGGCAGGATAACGA 58 24251637 24251658 GCCTATCATAGTGTTTACCTGG 58 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078972 1 1 5 139 3R 61861 62283 TCATACGCAGTTTCCACAC 58 62385 62404 CAAATAGCGTATATGCCCGA 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 2 3 4 107 3R 151086 151105 TTCTGACCAGATCAATCCGG 59 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 2 2 2 86 3R 640424 640444 AACAGGAGTTGTATGCAATGG 59 640492 641023 GATACAGACACATGCCGGT 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0273434 3 1 19 159 3R 1125285 1138718 AAGAACAGGAGCAAATCGC 58 1124164 1124182 CCACGGTGTAGGAAATGGT 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0078650,FBtr0301947,FBtr0078652 1 3 9 128 3R 1833858 1833877 CCAGATTCAGACGACTACGT 59 1830839 1833767 GTGTGGTGCCATTACTCCT 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602 3 1 3 100 3R 3044373 3044394 GCAACAGGACGATAATAAAGCT 59 3044052 3044313 TCCCGACATAGAAATCAGCA 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112823 1 1 8 80 3R 4663428 4664128 ATGTCCGAGTCTAAGTTCCC 59 4663367 4663385 ACAAGCTAACTTGCATGGC 59 NA Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 1 4 4 92 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051 1 2 4 99 3R 5195421 5198485 AACAGCAGATATCGCTCTCC 59 5195341 5195361 TCGTTATTCAGCAATCGAACC 59 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082051,FBtr0082052 3 2 4 98 3R 5199587 5216615 TGAATCATCTCACCGACGA 58 5199507 5199525 TGTAGTTCTCCTCGAAGCG 59 NA Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 2 2 2 117 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597847 5597925 TCTGATCCACTTTCTTCAGCT 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 3 9 9 81 3R 5845282 5845303 AGTTTATTCCCGAACTCAAGGA 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 1 3 6 80 3R 5930726 5930804 TGTTTCGAATCAAGATCGCTG 59 5930666 5930685 TGAACACAAAGGGTACATGC 58 NA Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314 1 1 2 86 3R 6579571 6579764 CACATACTGAAGGTGTTCCT 57 6579504 6579522 AACCATCATCGTTACCAGC 57 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 3 2 4 81 3R 6589611 6589632 AACTGTTGCTAATCGATTCAGG 59 6589671 6589890 TGGCGTTGATCTTCTAAATCTG 58 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 3 2 4 170 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6611949 6611968 AATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0082295,FBtr0082291 2 6 7 181 3R 6692683 6693696 CAGATTCACGCCAAGACAG 58 6692405 6692539 GTTGTAGCAACCTGTGAAGG 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 2 2 6 80 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628404 7629451 GACCATACATATAGTAGAACGCCT 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 1 2 6 120 3R 7628395 7636087 TGATGTATGGTCGCTATACCA 58 7628047 7628313 CCCAGCAGTTCCTTATTCC 57 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 2 5 5 74 3R 8270797 8270816 CTACCTCATGGTCACCTCTG 59 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114499,FBtr0113228,FBtr0114500 1 3 6 61 3R 8522002 8522021 GTCTGTCCATAGTCATGCAG 58 8522469 8522487 GTTGAGACTCCCGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 1 2 2 95 3R 9063840 9063858 CACGGGACAAATACCTGGA 59 9062985 9063783 CTTCCCAACTGGTATACTGGA 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 2 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632 3 1 5 133 3R 9796820 9797004 CATACAAGAGCCAAGATTGC 57 9796706 9796724 TATTAACTTCCGGCAAGGG 57 NA Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 2 2 2 69 3R 10485973 10485991 TTGGAGCCAAATTACGAGC 58 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 3 2 2 81 3R 10496132 10496230 ATCAATGCGCTCTATGTCC 57 10496069 10496087 ACTCGATTTCGTTGCTCTC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 1 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 2 3 3 83 3R 10970037 10970055 GAGTTCCAGAACTTGCACG 59 10969533 10969990 ATCAAAGTCAATGTGGCCG 58 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037 1 1 3 149 3R 10970953 10971049 CGCTCTGAGGATGAATCGT 59 10970822 10970840 GTGTAAATACCGCCCACCT 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 3 2 6 195 3R 11025182 11025201 GTACTCTCATGCGCATTTGG 59 11025424 11026417 TGCGCAGTAACTCATCCTC 59 NA Drosophila melanogaster 61 Su(var)3-9 FBgn0003600 FBtr0083131,FBtr0083130 3 2 3 85 3R 11085400 11088278 ATCAAGCTGGGTTATGCCA 59 11085333 11085351 GATGCATCCGATACGAAGC 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089959 3 1 13 100 3R 11126775 11126794 CTCAACACCCGTCTAAAGGA 59 11128936 11130909 ATCATCTCGTCTTCGAGCC 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 1 5 8 101 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0083254 1 1 2 81 3R 12011541 12011622 ATCACCAAGGGAACCTATGG 59 12011665 12011684 GATCGCACTTGATTCCAGTC 59 NA Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 1 2 2 80 3R 12187841 12187918 GCCAATCTCCTAATTGGTCAG 58 12187781 12187799 AAGATCGGGTCTTGGAGTG 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0300037 2 1 6 93 3R 12462522 12462715 CGAATGGACTGGCTATGTG 58 12462771 12462790 GATGACGTGGATAATTCCGT 57 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 1 4 4 80 3R 12474343 12474430 GTAGACATTAAACGCTATGCCA 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 2 5 5 80 3R 12755406 12755424 ATGCGTATGTTTCCAAGCA 58 12755287 12755364 GGAACCATATCTTGACCTGTC 58 NA Drosophila melanogaster 61 CG5292 FBgn0038491 FBtr0083410 1 1 1 119 3R 12978126 12978144 TCTACAAGGGCGACAATCC 59 12978283 12978301 AGGATCAGTGGTTGACTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tatl FBgn0260241 FBtr0299939 3 1 1 89 3R 14081483 14081501 TCAAGGCGAATCAGTACCG 59 14081613 14081631 TAAGCAAGGATACGGTGCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 PKD FBgn0038603 FBtr0083590,FBtr0083589,FBtr0083591,FBtr0083592,FBtr0290023 1 5 5 80 3R 14131624 14132351 GCAGCTCACTGAATATCCC 58 14131562 14131580 GAATACGGAGCACCATCAG 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0113246,FBtr0083702,FBtr0083703,FBtr0083700 1 5 5 103 3R 14751507 14751633 AATGATGATCGGTTCGAGG 57 14751700 14751718 CTGCGTAGATCCTCTACGA 58 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 2 2 5 95 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750866 14750887 AAGTCAAGAATATCCGTCTCAG 57 NA Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 1 2 2 114 3R 15279889 15279907 TGATGCCCTTTCACCTCTC 59 15279985 15282857 GTGTTCCAGGTCCGATCTC 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492 1 1 3 80 3R 15464463 15464632 CATGAAGGAGTCGTTATGCA 58 15464402 15464422 TTATTGGTCAAGTAATGGGCC 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301378 1 1 7 87 3R 15579579 15586001 ACAGGAGTACAGTGTGCAG 59 15586052 15586130 ATACTTTAGGCGACCCTGG 58 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248 1 1 2 87 3R 15686429 15686447 ATGGTGTTCTCCACACTGG 59 15683398 15686382 TAGGAGGATCATCTGCTATTGTC 59 NA Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 1 2 2 99 3R 16384906 16384988 CGAGATACAACAAGCGGTC 58 16385051 16385069 TATCTGGATGGTGGGAACG 58 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 2 4 4 127 3R 16450496 16450514 CATCGATAGCGTACCAGCA 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 1 2 2 80 3R 16737624 16737701 GTGTTGAAGGAAGAGTACGG 58 16737563 16737583 GCCCTTTATCATGTCCTTCAG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 3 5 16 165 3R 17004776 17004797 CCTTATGAACTCCATGAAGGTG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 3 5 16 165 3R 17004776 17004797 CCTTATGAACTCCATGAAGGTG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 82 3R 17202595 17202614 ATTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084061 2 1 22 92 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17181965 17200793 CAAATGTCACTTGAGCCTCTG 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 1 4 4 85 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 3 4 6 91 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615472 17616438 CGCACGAATATAAGCACCG 59 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 3 5 5 80 3R 18430299 18430377 CAGCAGCTTTAAGAAGACTCC 59 18430417 18430437 AAATACAGCACAAGATCACGC 59 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 3 2 2 147 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828596 18828615 GTGAACAGTTTGTCCGACAG 59 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 3 2 3 187 3R 18878911 18879088 ACAAAGAAAGCACTGATTCCG 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 1 3 4 139 3R 19432760 19433254 CTGCTAGACTTCCACAATGG 58 19432640 19432658 ATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273215 1 1 2 80 3R 19673818 19673898 ATGATGTGATTGTGTTGAGCG 59 19673940 19673958 CTTCATTGGGTTGCAGCAG 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 1 3 5 102 3R 19839340 19856223 ATCCCAAGACTCTGTTCGC 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 2 2 2 80 3R 20014179 20014253 TGTGGCGATATGGAGATTCTC 59 20014119 20014137 CTCCGAACTGTACTCCTCC 58 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0299530 1 1 2 104 3R 20118600 20118618 AAACAATCGATCTCGGCAC 58 20118686 20118863 AGGTTACTTCCATCTGGGC 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 3 4 4 88 3R 20172700 20172812 AGAACTACAACTCGACGGG 59 20172630 20172648 AGTCGAGCCATACTGTTGG 59 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0110867 1 1 2 80 3R 20212193 20212335 AGCAGTTGTAGATAACATGGG 57 20212133 20212151 CGCTGGAAGTATTGACGAC 58 NA Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 1 1 1 85 3R 20219026 20219044 AAGGATACCATTAAGCGGC 57 20219154 20219172 GAACGACCATTGAAACCCA 58 NA DesignNoJunction Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 1 2 3 81 3R 20476241 20476261 CACCAACTATGTGTTCGTCTG 59 20476304 20476382 CTGGGATATGGTAGCCTGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100633 3 1 18 113 3R 20523984 20528755 AATGGAGGGTGATATCACTCG 59 20528894 20528912 GTGTTGTTCATGTGGTGCA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581,FBtr0100634 3 3 18 152 3R 20528893 20528912 ATGCACCACATGAACAACAC 59 20529027 20529628 ATCATTCTCTGGTGGCCTG 59 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084732 2 1 2 80 3R 20682616 20682690 TAAGGAACCTTGAGGATCCG 58 20682555 20682577 CCAACTTAGTTATGCTGGATACC 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299662 1 1 3 163 3R 20866588 20867472 CTATGTGTTGTCCTGCGGA 59 20866443 20866462 CAAGATATAGCGCGACTTGG 59 NA Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 3 2 2 185 3R 20874275 20874293 AATCTCAACTGCTACGCGA 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 Clbn FBgn0259152 FBtr0301277,FBtr0301278 1 2 2 153 3R 20954240 20954258 GAAACAACGGAAGAAACGC 58 20954374 20954464 CTTGAGCATCCTTTACTGCT 58 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 CG11891 FBgn0039309 FBtr0300131,FBtr0300132 1 2 2 80 3R 21098641 21098716 AGATCCTTCTATGCTGCCT 57 21098760 21098778 ATCCATTGATGCCTCTTCC 57 NA Nonspecific Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881 2 1 2 81 3R 21345439 21389810 TCCCAAATCTAAGGTTTCAGAC 58 21400608 21400626 GCGTTCATCTCCGATACTG 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933 1 1 2 142 3R 21506057 21506127 TTCCATGCACTTGTTGCAG 59 21505933 21505951 GCGAGTCCTTTGTAGATGC 58 NA Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 1 1 1 72 3R 21614184 21614202 TTTCACCTGGAGTCAGAGC 59 21614006 21614024 TTAGCAGCACAGGTAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 2 4 9 162 3R 22699731 22699803 CAACAGCTACCACACTCCT 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 3 2 2 94 3R 23212947 23214186 GAATGATCAGGCGACATCTG 58 23212872 23212891 ATTGATATTCACGTCCCGGT 59 NA Drosophila melanogaster 61 Mlc1 FBgn0002772 FBtr0085196 3 1 2 96 3R 23484258 23484276 TGAGAGCTTGGATGACGAG 59 23483825 23484199 CTGGACGAACTGAGAGTAGG 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 2 5 6 83 3R 24639656 24639675 TTACTGCTACGGATATTGGC 57 24639720 24640880 CGCTCAAACACCTTATAGCA 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299751 2 1 13 98 3R 24733047 24733438 GCAGTATCTGCAGATGAGTG 58 24733499 24733517 TTTGTTCTTAGGCTTGGCG 58 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0085359 3 1 2 118 3R 24867891 24867910 GAATGGGCACAAGTTCATGG 59 24868574 24870103 CAACTAACGTGCAGACTTGAC 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 2 2 10 105 3R 24962334 24962352 GTTATTCGTCCTGGTTGCC 58 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 2 5 10 117 3R 24959139 24960776 ATTTGAAGCTTGGCTTCGT 58 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 3 3 3 80 3R 25073691 25073709 CCTGAACCGACAACTTGAG 58 25073566 25073648 GTAACCGAGATCCATTTGGT 57 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540 1 1 3 125 3R 25574481 25574553 AACGCAAGGGAATCTTCGA 59 25574374 25574392 AATCATCTTCAGGGTGGCC 59 NA InUTR Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 3 10 12 116 3R 26398690 26398708 ACCTGGTGGAGAAGAACTC 58 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 1 3 3 80 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986982 26987000 GATGAGTTTGTCGAGCAGC 59 NA Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 1 2 2 81 3R 27166296 27177001 AGATCAAGGATGATTTGCCC 58 27177045 27177063 CCGAAGTATGAGGTCTCGA 58 NA Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 1 1 1 222 3R 27593855 27593873 TATGTAAGTCAAGCGCGGA 59 27594117 27594135 AGTTCTTTGCGTTTCTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 2 7 7 93 4 258101 258120 AGAGCTCGACTTACACAGTC 59 258176 260948 AGCGGATTCTTTACTGGCT 59 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 3 4 4 83 4 596940 597612 TTAACGGAAACGATGACCAC 58 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 CG11076 FBgn0039929 FBtr0089220 1 1 2 293 4 1052221 1052239 CTGATGTGGCTGAGTAGAG 57 1051129 1051150 ATAGATCTCAAATAGCCCAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sv FBgn0005561 FBtr0301563 2 1 8 87 4 1119575 1122570 TACTACACATGTCATGGAGGC 59 1122619 1122637 CAATACGCTGACGAACGAC 59 NA Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 2 2 2 99 4 1194713 1194793 ACAATACAGACTCGACTGGA 58 1194633 1194651 TTACAACCCTTATGTGGGC 57 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 2 5 5 81 4 1230678 1230696 CACCAAGTAGCTCAAGTGG 58 1230563 1230634 CTATTCTGCCCTGTAACTGG 57 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 2 4 4 121 U 1092306 1092325 CAGATCTAAGTTGCGATCCT 57 1092151 1092224 GTAAAGAGAATTCACTGCTCG 57 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0070131 3 1 6 95 X 640328 640561 CATTTGTTTACGACTCACGCT 59 640618 640636 TGGAGGGCATCAGTATGTG 59 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0301968 2 1 3 138 X 1113610 1113763 ATCTGTACTCGAACCAGGC 59 1113490 1113511 TAGAACTCATCATACTCGTGCT 58 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 77 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 2 3 3 104 X 2038239 2038324 GTTCAAGTTCCTGAACTCCC 58 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 1 2 2 143 X 2146890 2146963 GAAGTCCGCAACATGATCC 59 2146765 2146783 CCTGATGGACTGAATGCCT 59 NA InUTR Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 3 3 3 88 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678711 2679044 CCAGGATTATCTGCAAATAGCG 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 2 8 8 80 X 3679518 3679634 GGAACCTACTGGTATCTGC 57 3679678 3679696 CCATACGTCCACTTTGGAG 58 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0112680 1 1 8 85 X 3641434 3643084 ACTTGTGTCCTCATCAATTCAG 58 3656533 3656551 ATGTTGTTGATAGCTGGGC 58 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608 1 1 3 91 X 3771414 3771432 CTGCAGAAACTCACCATGG 58 3771487 3773053 AATGGGTAAGTGTGCTCCA 59 NA Drosophila melanogaster 61 CG15239 FBgn0029681 FBtr0070612 1 1 1 153 X 3783470 3783488 AAGTTTGGACCGGAAGGAG 59 3783753 3783771 TGTCGCTGTCATAGTCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070665 1 1 3 85 X 4035860 4035878 ATCGCATTGAACTGAAGGC 58 4030793 4035811 GACGTCAATTCCTCGTGTC 58 NA Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 3 1 1 241 X 4543618 4543636 GATGACCGAAACATTCCGG 59 4543337 4543355 ACATAGTTCGACCTGGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 2 2 2 103 X 4570357 4570375 AAGCACTACAGTCCTGTGG 59 4568638 4570290 CAGTTGTTGTACGCTCTGC 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0299588 2 1 5 102 X 5138074 5140564 ATTGCCAAAGAGCGTTGAC 59 5140627 5140648 GTCATCGATTAGAATCTCGCTG 59 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301084 2 1 2 192 X 5601291 5601310 TAATGTCAGCTACCAGGGTG 59 5601527 5601605 AATCGCAACCAACTTGCAG 59 NA Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 1 2 2 84 X 6715183 6715256 ATTCCAGCCTACCATTCCA 58 6715304 6715322 CATACCACTGATTCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG4542 FBgn0029906 FBtr0299813,FBtr0070970 3 2 2 84 X 6715183 6715256 ATTCCAGCCTACCATTCCA 58 6715304 6715322 CATACCACTGATTCAGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 2 2 2 80 X 6736604 6736622 GGAACAACAATGGATCCGC 59 6735974 6736563 TCATTGACATGTCCCTTATGGA 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300841,FBtr0100211 1 2 21 194 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6980001 6981654 GCATAACGTGACATTCCGG 59 NA InUTR Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 1 2 2 117 X 7235526 7235615 ACTTGTTTAAGGCTGTGGAC 58 7235695 7235713 ATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 2 4 5 80 X 8404724 8406391 TTTCAATGGAAACGATCCCG 59 8406430 8406452 GTGATGATTGAGCTTAGTGAACC 59 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 1 4 4 80 X 8458337 8458356 TAGTCGAGATCTTTGGCTCC 59 8458398 8458525 CCCACAAACCTAACACAACG 59 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 2 2 2 114 X 9182502 9182520 AACGATGAGAATTGCTGCG 59 9182598 9187950 TGAAGCTCTTCCCTCTTCC 58 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 84 X 9524044 9524065 CCGTCGGATTATATTAATGCGA 58 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 1 3 3 80 X 9955175 9955259 AGCACGATAGTTCAGACTGG 59 9955114 9955134 CGCAAAGCATACGTAGATTCC 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 2 2 2 117 X 10943063 10943081 TTACTGCCACAGATGTCCC 59 10943162 10943235 ACATGATGAGTCCTCGCAG 59 NA InUTR Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0301500,FBtr0301501 2 2 3 80 X 11592563 11592581 TAGTCGTTGATCCTTCGCA 58 11592623 11594666 CACCCATTAACACCATTTGGT 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 1 2 6 89 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534863 12537914 GTCGTTCAGCTGATCTGAG 58 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 3 4 4 82 X 12550118 12550137 CTGAACTATTGTCGTAGCCT 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 Set2 FBgn0030486 FBtr0301559,FBtr0073779 2 2 2 81 X 13314265 13314283 GTAAGCTACCAATGCCACC 58 13314328 13314410 CTCTGGGAACTCTTGACCT 58 NA Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0073803 3 1 2 153 X 13479983 13480001 AATGGGTTGGCCAAATACC 58 13480118 13483965 TTGGCCTTTAACTTCGACG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0301923,FBtr0301922 1 2 10 80 X 13493482 13494112 AAGAGTACACCTCCGAGGA 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 1 2 2 245 X 13502356 13502442 AACTAGCACAAACCATGCA 58 13502648 13502669 TCTGGAATGTAACTGAGATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 1 2 2 106 X 14117987 14118071 CAGAACAATTACAGTTCGACCT 58 14118138 14118156 TGTTGCGTCATGATGTCCT 59 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967,FBtr0110969,FBtr0110968 3 3 3 61 X 14969792 14969811 AAGTCCCAGGATGTCTATGG 58 14968377 14968396 GTTAAAGCCCATTCGAAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 2 2 2 80 X 15350446 15350465 TGCTGCTATTCTACAATGCC 58 15350326 15350405 TGGTTACGTGATCGTATAGGG 59 NA Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074077 1 1 2 80 X 15353577 15353654 CCATATCTGGCAACGTTCC 58 15353515 15353536 AAAGTCTAGTATGTAGTGCAGC 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 CG8952 FBgn0030688 FBtr0074193 1 1 1 66 X 15660354 15660372 GATCCTGCCAACAGTTCAC 58 15660232 15660250 CCAATTTCGCATCGCTACC 59 NA DesignNoJunction Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 2 5 5 80 X 15749870 15749890 CTATAATCGCGTTGGAATGGA 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 1 4 4 84 X 15769164 15769182 CTAGATTTAGGCGATGGCC 57 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 2 4 4 80 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896736 15896927 CCTGGTCCAGCTTTAACCA 59 NA Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 2 2 2 176 X 16110288 16110307 AACTCGCTGCTAAATTAGCA 58 16107225 16107243 TAGATGGGAGTGCACATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215 1 1 5 101 X 16175215 16175233 TATTTGTTGAGGAGGCCGA 58 16175295 16175481 CTACCCTGATCTTAAACTCGAC 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 2 5 5 113 X 16276734 16276752 TGGCTAATCATAAGCCGGG 59 16276572 16276660 CGATCGAATTGATATCCTCCTG 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 3 5 5 110 X 16277019 16277038 CTCACCGATCCCGTATAGTC 59 16276866 16276947 ACAAAGTTGTGCAAGTCCTG 59 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0074277,FBtr0074276 2 2 3 80 X 16323429 16324661 CTAACAGTCTATCCACTGCC 57 16324701 16324722 TATGGACTTCATCTGATAGTCG 57 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 3 2 2 124 X 16534126 16534144 GAACAACATCGGCATGGTG 59 16533958 16533976 AAGACTAAGCACTACGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 3 2 2 80 X 16576145 16576243 CCACGATATCCTGTATCTCGA 58 16576085 16576104 AAGTAGTTCCGGATGTCCTC 59 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 3 7 7 60 X 16579564 16579582 TTGATATCCACGCACATGC 58 16579426 16579444 AGTTCTCGTAGTGCACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 3 2 4 86 X 16602743 16602762 TTATCCGTACGACAATACGC 58 16603312 16603422 GAGTAGGTCTGGAACATCG 57 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089661 1 1 8 121 X 17933206 17933224 TCCCAGAACAATCCATGGA 58 17847365 17933121 AATTTGGGCAAAGACTGGT 57 NA Drosophila melanogaster 61 CG7536 FBgn0030890 FBtr0074530,FBtr0074531 3 2 2 81 X 17974381 17974459 CTTTCACAGTCCGAACTATGC 59 17974320 17974338 GCAAGAGGACACAATCGAG 58 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 2 2 2 142 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208839 18208857 TACACAAAGTCACCCAGCT 58 NA Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 1 2 2 60 X 19173016 19173036 GTCTACCTATTTGAGCTGGGA 59 19171980 19171998 CTCCAATGGCGATAATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 1 4 4 80 X 19466332 19466353 CAACAGAAGGAGGTCATTAAGC 59 19466209 19466292 GCTTTGCTCGTACTGTTCAC 59 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 1 2 2 80 X 19506166 19506185 CAGTGATATCTGTGTCCCGA 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific Drosophila melanogaster 61 CG9572 FBgn0031089 FBtr0070006 3 1 1 216 X 20044242 20044264 GTCTATAGAGATCCGGTCTACAC 59 20044801 20044819 GATTGTCCTTGCACTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 2 2 2 107 X 20127881 20127899 AGAGCCTGTGTTCTTCGAC 59 20127049 20127811 CCATAGCCACCATTGATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537 2 1 2 148 X 20345367 20345385 ACAACCTGTCGAAGATCGA 58 20345024 20345255 GTAGTCCAACGACAGAACG 58 NA Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 2 2 2 81 X 20932575 20946400 AATCGAAGCGGTCTACCTG 59 20946445 20946463 CTTCATGCAGTTGAGCACC 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 1 5 5 80 X 21228145 21228163 AGGAGAGCTACAATGTGGT 58 21228206 21228294 TGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 2 5 8 83 X 21247628 21247646 CTAATACGCGCCTATCTCG 57 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070057 2 1 2 60 X 21479591 21479609 ATGAACGAGTACAACGAGC 58 21478877 21479567 GGCTCCATGGATAGGACTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 3 3 5 95 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864299 21864317 GTAGACCGTAGTCCTCCCT 59 NA Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 3 1 1 224 X 373209 373227 AACAAGCCCGACATAACTG 58 372960 372978 TCCTTGCGAAATTCAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:CR31602 FBgn0051602 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:60Cb FBgn0083059 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:42Aa FBgn0011955 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30241 FBgn0050241 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:185 FBgn0065076 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32173 FBgn0052173 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-274 FBgn0067720 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-10 FBgn0046833 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:ATPase8 FBgn0013673 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 Ory FBgn0046323 FBtr0302286 3 1 1 107 YHet 229247 229268 AGAGCTTTGATGAAGACAATGG 59 229336 232327 AGAGATTTGGTCGTGTCGG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1854a FBgn0083042 FBtr0113571 1 1 1 71 X 17040044 17040062 AAACTGCAGCGTTGATCTC 58 17039991 17040013 GAATAGCTAACCATGGGATTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10918 FBgn0031178 FBtr0077218 3 1 1 61 X 21299762 21299781 GATAGCTCCACCGATAGCTC 59 21299720 21299738 TATCCCGAACCAGTAGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 3 4 4 94 X 20989788 20989900 ACCTAATAGAGATGGAGGATCAG 58 20989952 20989972 CTTCTCACAGAATCCCAAACC 59 NA Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 1 2 2 80 X 20947145 20947169 GATACTAAAGAAGAGTGTGGATGTG 59 20947207 20948007 AAAGGAACATGCTCGTCCT 59 NA Drosophila melanogaster 61 CG15459 FBgn0031108 FBtr0077329 3 1 1 191 X 20284592 20284610 GGAGCTATAGGCAGAACAC 57 20284250 20284269 TGTACACGATGAACAACAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ubqn FBgn0031057 FBtr0074750 2 1 1 134 X 19578100 19578120 GAAGTTGACGAAGATTCTGGA 58 19578559 19578577 GTTGTGCATCTGAAGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpS14 FBgn0044030 FBtr0074785 3 1 1 60 X 19373536 19373555 GGAGTTGTCCACAAGTACAG 58 19373495 19373513 TATTGTAGTCGGCGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32544 FBgn0052544 FBtr0074644 3 1 1 162 X 18754364 18754382 GGAGAACACCAGCTACGAG 59 18754559 18754577 ACTCTCGTCTTGTTGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 3 2 2 133 X 18201379 18201397 GCAACTGGATCGACTATCG 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 2 2 2 146 X 17984264 17984361 GTCCGTCAAATGGAGTGAG 58 17984136 17984154 CACTTGATCGACGAGATGC 58 NA Drosophila melanogaster 61 CG6769 FBgn0030878 FBtr0074493 3 1 1 81 X 17756221 17756314 TTATCCGGACAATAATGAGGG 57 17756357 17756375 CACCAGCTGATACTCATCG 57 NA Drosophila melanogaster 61 CG6769 FBgn0030878 FBtr0074493 1 1 1 81 X 17756218 17756313 CAGTTATCCGGACAATAATGAGG 59 17756354 17756372 CAGCTGATACTCATCGCCA 59 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 2 2 2 116 X 17568968 17569360 ATTACCTGATGACCAGGGAG 58 17568871 17568889 TACCAGTACCTCCAGTTGC 58 NA Drosophila melanogaster 61 CG8408 FBgn0030850 FBtr0074487 1 1 2 80 X 17518225 17519570 TACGTATTCCTGCAAACATTCG 59 17518166 17518185 GATCGGGAACTTGTACAGGA 59 NA Drosophila melanogaster 61 CG12996 FBgn0030835 FBtr0299541 2 1 1 86 X 17144690 17144708 CACCAGAATCAACTGCAGC 59 17144758 17145084 AATTCGAACTCTGATGGCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS5a FBgn0002590 FBtr0074406 2 1 1 187 X 17039108 17039126 GACTCCACCCGTATTGGAC 59 17037794 17038659 TTGGAAGATCCCTTAGCAGC 59 NA Drosophila melanogaster 61 CG9104 FBgn0030800 FBtr0074348 2 1 1 84 X 16778141 16778159 AAGATCCGGTGCATCTTCC 59 16778013 16778099 TGGATATGTAGTTATCAGGAACCTG 59 NA Drosophila melanogaster 61 Rrp45 FBgn0030789 FBtr0074355 1 1 1 80 X 16684540 16684718 GGAATCTGTATGACGCCAG 58 16684478 16684497 CGTCCTTATACCAGACATCC 57 NA Drosophila melanogaster 61 sing FBgn0261245 FBtr0074318 1 1 1 112 X 16573842 16573861 AGCTCATCCAGTTACATGGG 59 16573935 16574028 TAGCCCATGTAATAGCAGGC 59 NA Drosophila melanogaster 61 CG9903 FBgn0030756 FBtr0074297 1 1 1 94 X 16433850 16433868 CACTGTCCGTCGTACTCAG 59 16433702 16433793 AGCTACAAGAATCTGCCAGG 59 NA Drosophila melanogaster 61 CG9170 FBgn0030716 FBtr0074154,FBtr0074153 2 2 2 80 X 15875698 15875784 ACTGGAAGATATGCTACTCGG 59 15875638 15875656 GATGGTCCCATTGGGACTC 59 NA Drosophila melanogaster 61 mRpL3 FBgn0030686 FBtr0074090 1 1 1 107 X 15655311 15655329 TTTGGTTATTCTGCACCGG 58 15655400 15655477 TATTTCCACTGAGCCGGAG 59 NA InUTR Drosophila melanogaster 61 Actr13E FBgn0011741 FBtr0074203 1 1 1 60 X 15630741 15630760 ATGAACTTCCAGAGCATCCA 59 15630700 15630721 CAACCTTGTACTCCTCAAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12379 FBgn0030676 FBtr0273278 1 1 1 150 X 15627868 15627888 CCGAAGAACACAAATTGATGC 58 15627581 15627756 ATCGTCCACTGGCTTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9213 FBgn0030655 FBtr0074071 3 1 1 254 X 15467257 15467329 TAAGCAAATGTTCGAGCGG 58 15467021 15467039 AGCTGTTTGTCCAACTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074001 1 1 2 73 X 15187874 15187892 AGATTCTGCGGCTCTACAC 59 15188372 15188390 TTTCTCGAATCGCCTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110969 1 1 3 194 X 14968144 14968162 GTCAAGTTCAAGGCAGCTG 59 14966999 14967989 AACATTATCTTCCTCGACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12481 FBgn0030542 FBtr0100281 3 1 1 60 X 14081439 14081458 TCATTGAGGAGATGGAACCG 59 14081480 14081499 AACGAAGTGGGTCTATGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ste:CG33241 FBgn0053241 FBtr0300090 2 1 1 110 X 13948594 13948612 TCTGATACACAGCTGGACG 59 13948442 13948520 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11068 FBgn0030536 FBtr0073854 3 1 1 158 X 13849697 13849786 CTATACGATTCGCAACGTCAC 59 13849906 13849924 CTTGTAGGACTCCAGGGTG 59 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 2 2 2 246 X 13502355 13502442 AAACTAGCACAAACCATGCA 58 13502648 13502669 TCTGGAATGTAACTGAGATCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 3 1 1 289 X 13450736 13450860 GTGACAAACGCCAATTGAC 58 13451113 13451131 GTTGATCAAATTGGGCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073763 3 1 2 160 X 13223920 13223938 AGAACGAACAAGAGGAAGC 57 13225219 13225237 TCGCTCAACTTGATGTCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32650 FBgn0052650 FBtr0073698 1 1 1 60 X 12792599 12792619 TGAAGACATTTGTGAAGACCC 58 12792559 12792580 CAATCATGGTGAAACAACTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32655 FBgn0052655 FBtr0073633 3 1 1 86 X 12129255 12129273 CGAAGTCTCGTTGTTCCAG 58 12129121 12129140 CTCGTCTAACATGTCCTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 tsg FBgn0003865 FBtr0073582 2 1 1 60 X 11882397 11882415 CTATCGATGGTTCCACGAC 57 11882355 11882376 TCCATAATTGAGGCAATTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15740 FBgn0030340 FBtr0073605 2 1 1 188 X 11739895 11740088 GAAGATGAATTTCTTTGGCGC 58 11739727 11739745 TAGTTGCTCTCCTGGAAGC 59 NA Drosophila melanogaster 61 CG1738 FBgn0030291 FBtr0073451 2 1 1 102 X 11243402 11243421 ATTCGATATCAAGAAGGCGC 58 11243483 11243504 CTTGATCAGCTGAAACATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299513 3 1 2 80 X 10999333 10999405 GGTTCATTCTTTCGTCGGA 57 10999449 10999467 CCTCCGATGTTCATGAGTC 57 NA Drosophila melanogaster 61 Rab9Fb FBgn0052670 FBtr0073401 1 1 1 60 X 10846069 10846090 GTGTGATGATCTGGATAATCGT 58 10846030 10846051 ATGATTGGCATAGTTGAAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Or9a FBgn0030204 FBtr0071462 3 1 1 84 X 10353102 10353120 TTACCCGTACGATCTCCAG 58 10352961 10353056 CATGGTTACAGCACTATAGCT 57 NA Drosophila melanogaster 61 CG34319 FBgn0085348 FBtr0112521 3 1 1 190 X 10150175 10150194 GCTGAGTCGCTATTTGATGG 59 10149163 10149181 TCTCAAAGTCCAGCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32685 FBgn0052685 FBtr0071489 2 1 1 82 X 9967960 9967978 ATCAAACTGGACGTGAGCT 59 9967431 9967915 CATGCATTATCGTCCGTAGC 59 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367,FBtr0071366 2 2 2 131 X 9501593 9501672 TCCGTGCCAAGATCATCTC 59 9501480 9501498 GGTCATTGTGATGCGTCAC 59 NA Drosophila melanogaster 61 CG15369 FBgn0030105 FBtr0071309 3 1 1 174 X 9110964 9110983 TCTCGCCAAGATTCTAATCC 57 9111120 9111191 TTTGGAGAGGCGATAGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ost48 FBgn0014868 FBtr0071344 1 1 1 152 X 9052444 9052462 GATGTGGAAGGCTCTCCTG 59 9052236 9052328 TTAAATCCGCGATCCTGCA 59 NA Drosophila melanogaster 61 CG6999 FBgn0030085 FBtr0071288 2 1 1 60 X 8982788 8982881 AACGCTGTCAAGTTTCAAGAC 59 8982903 8982921 CGAAATGAACTCCACCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG12772 FBgn0030055 FBtr0071221 2 1 1 107 X 8573708 8573727 GTACAAGCACAAGGAACTGG 59 8573797 8573883 AAGAATGACTGCTCCCTCG 59 NA Drosophila melanogaster 61 CG32713 FBgn0052713 FBtr0071243 1 1 1 60 X 8351277 8351296 ATGTTTACACTGATCGGTGG 58 8351236 8351254 GATTGACTAGGCCACCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10958 FBgn0030004 FBtr0071153 3 1 1 60 X 8028132 8028153 CTGCTAAAGATTCTTGAACCGT 59 8028174 8028192 TATTGTCGATGCGTACCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10958 FBgn0030004 FBtr0071153 1 1 1 60 X 8028400 8028421 ATACATTTCTACCCAAGAGCGA 59 8028439 8028460 ATGACCAGATAGTGATTGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 2 2 2 105 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997745 7997830 GGAATCCTGCTTGTAATCCG 58 NA Drosophila melanogaster 61 RpS14a FBgn0004403 FBtr0071095,FBtr0071094 2 2 2 123 X 7828194 7828212 ATGTCACTGATCTGTCCGG 59 7828299 7828376 TTCTCAGCCACATCCTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dpr14 FBgn0029974 FBtr0071134 2 1 1 81 X 7800329 7800347 CTCCTATATCACCTGGCGG 59 7800199 7800284 CATGTCCGTCTTGACACTG 58 NA Drosophila melanogaster 61 CG1409 FBgn0029964 FBtr0273372 2 1 1 60 X 7752464 7752482 GTGAGTGACCTTACCAACC 57 7752506 7752524 TCACACGAAACAAGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NELF-B FBgn0027553 FBtr0071077 2 1 1 99 X 7622248 7622266 CGTGAATATTCCGGGTCAG 58 7622089 7622187 CAATACACCATTCTCAAGCTG 57 NA Drosophila melanogaster 61 CG15035 FBgn0029949 FBtr0071063 3 1 1 60 X 7296365 7296383 GCATCAATTTAACACGCCC 58 7296323 7296341 TGCATCGAAGTCATAACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8300 FBgn0029937 FBtr0071015 1 1 1 113 X 6999321 6999339 ATGCTGTACTTTAGCGACG 58 6999413 6999835 CATTTCGCTCTCGTTTAAATGG 58 NA Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572 3 1 2 207 X 6973397 6975036 TCTTTGGTCTCGATAGCGA 58 6973208 6973226 TGCTGGTGGTAAAGTAGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300759,FBtr0300760 2 2 2 96 X 6917121 6925880 ATTTATGCCAAGGGTTACGC 59 6917044 6917064 TTGGCATCAAATAGTGACTGG 58 NA Drosophila melanogaster 61 CG4593 FBgn0029929 FBtr0071009 2 1 1 75 X 6908183 6908201 AATCGACGACATACCCACC 59 6908240 6908258 CTTGTTGCCCTGAATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3032 FBgn0029928 FBtr0071032 1 1 1 60 X 6907253 6907271 CAAGAGTCTCTGCATGGTC 58 6907211 6907229 CATCGATGGGATCTGGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14441 FBgn0029895 FBtr0070959 3 1 1 93 X 6603917 6606317 GGCCAACGTCAAGATTAGC 59 6606374 6606392 TTTCTTAAACACGCAGGCC 59 NA Drosophila melanogaster 61 CG5928 FBgn0029836 FBtr0100295,FBtr0070871 1 2 2 116 X 5962609 5962627 AGTGAGCACGAGAAGTACG 59 5962704 5963098 TTTGGGCTTCTGAATAAAGGTG 59 NA Drosophila melanogaster 61 CG16756 FBgn0029765 FBtr0070776 2 1 1 95 X 5321714 5321850 CTCTCGAATTGGATTTGTTTGC 58 5321906 5321924 GAACAGCCCATAGTTCCGA 59 NA Drosophila melanogaster 61 CG11444 FBgn0029715 FBtr0070698 3 1 1 61 X 4447982 4448000 TTCGTCAACCACAAAGGTC 58 4447939 4447958 GATTCCTGTTGCAGTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32778 FBgn0052778 FBtr0070622 1 1 1 80 X 3978727 3978832 GGATCCCAGTGGTTACTCAC 59 3978875 3978893 TAACCGTGGTATCCAGCAG 59 NA Drosophila melanogaster 61 w FBgn0003996 FBtr0070490 2 1 1 80 X 2685494 2685512 ATCAACGGAGCCATCTTCC 59 2685362 2685454 CTCTGAGGTGAACACATTTATCG 59 NA Drosophila melanogaster 61 Bzd FBgn0011566 FBtr0070447 3 1 1 98 X 2502130 2502216 GATCTCATGTCCCATTACGC 58 2502051 2502069 ACTCTCGGCCATCATATCG 59 NA Drosophila melanogaster 61 PsGEF FBgn0040387 FBtr0070463,FBtr0300879 3 2 3 106 X 2273236 2273318 CGGCAGATCTTTCTAGTTAACG 59 2273151 2273170 AGACCAATATCACTCAGCGG 59 NA Drosophila melanogaster 61 msta FBgn0053548 FBtr0070421 2 1 2 162 X 2106968 2106986 TTACTATGGTCCACGCTGG 59 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG16903 FBgn0040394 FBtr0070434 1 1 1 93 X 1972797 1972872 AGGAAGTCGAAATCCTCGC 59 1972722 1972742 CGCCATCACCTAGATTATTGC 59 NA Drosophila melanogaster 61 CG4290 FBgn0025625 FBtr0070340 2 1 1 80 X 1954184 1954203 CTACAGAAAGTCTACCGCGA 59 1954053 1954142 CTCCATAACCTGGTAGAGCT 58 NA Drosophila melanogaster 61 CG14778 FBgn0029580 FBtr0070254 2 1 1 85 X 1364121 1364198 ATGGGTCAAGATTTCCAGC 57 1364247 1364265 TGTACGAGATCGTCTCCAC 58 NA Drosophila melanogaster 61 CG14627 FBgn0040361 FBtr0070199 2 1 1 62 X 1076554 1076572 ATCCGGAAACTCGGTTCAG 59 1076597 1076616 GAAATGGGCACTATGATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14631 FBgn0029552 FBtr0070172 2 1 1 81 X 906282 906300 TCTCGACATCGGAAACCTC 59 906345 906363 TTATTCATCCGGTCACCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13359 FBgn0025616 FBtr0070145 1 1 1 60 X 697379 697399 CAGCGGTTAATTCCCTATGTC 58 697339 697358 ACCACACTACCATATCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ac FBgn0000022 FBtr0070072 2 1 1 60 X 264199 264218 TCTGTTATCCGGAGAAATGC 57 264241 264259 TGAAGCCATTGTTGACCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SP71 FBgn0029128 FBtr0100136,FBtr0100135 1 2 2 80 X 94985 95066 TGAAGACACTCCCTATGGC 58 95108 95128 TCGATGATCTTAAAGCTGGTG 58 NA Drosophila melanogaster 61 CR40560 FBgn0085743 FBtr0114193 3 1 1 108 U 3558148 3558168 TTCACGTACTGGTTAACTCTC 57 3558060 3558081 GGTGGTAAATTCCATCTAAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42422 FBgn0259853 FBtr0300151 2 1 1 90 U 7568437 7568456 GCTTGTTCTACGACGATGAG 58 7568366 7568385 TTTCGGTGCCTATCATTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40936 FBgn0085539 FBtr0302345 1 1 1 81 U 8041223 8041241 ATTTATGTGCCCGAAGAGC 58 8041283 8041364 GTATGCGTTCTATTTCAGATCG 57 NA Drosophila melanogaster 61 CG40801 FBgn0085520 FBtr0113933 1 1 1 144 U 2929776 2929870 TTTCAATTCATCGTTGAGGGC 59 2929652 2929670 GTGCTTTGACACCATCACC 59 NA Nonspecific Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089994,FBtr0089993,FBtr0089996 3 4 4 80 4 581376 581395 CTTGGCTCTTTCAACTGCAG 59 581437 584996 TTTGGTGGACCTAGAGAAGC 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 1 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2626 FBgn0082983 FBtr0113598 1 1 1 60 3R 26033668 26033688 GCCAATTACTCGTTATTGCAG 58 26033628 26033648 CCAATATTTGGAGATGCAGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2562 FBgn0082986 FBtr0113585 2 1 1 60 3R 16648654 16648673 AATCTGATATCGTGGTTGGG 57 16648693 16648714 TCTGGGCAAATCATTGATACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33629 FBgn0053629 FBtr0091606 1 1 1 80 3R 5887524 5887589 TAATAATGCGTTCACTCTGCAG 59 5887630 5887648 AGAGCAAAGTCCGACTCAG 59 NA Drosophila melanogaster 61 tRNA:CR31071 FBgn0051071 FBtr0085087 1 1 1 60 3R 22773034 22773056 GGTTCTATGGTGTAATGGTTAGC 59 22772996 22773014 AGATTTGAACTCGGATCGC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2126 FBgn0039876 FBtr0085857 3 1 1 80 3R 27601402 27601478 GGTTGATCTATTACTCCTTTCCG 58 27601344 27601364 CCAGTTTGAGGGAATAGTGGA 59 NA Drosophila melanogaster 61 CG15556 FBgn0039821 FBtr0085737 3 1 1 81 3R 26954882 26954962 CCAGGATTGAATGATACCAAGC 59 26954822 26954843 CCTCAAATTGAGTTTCATTCGC 58 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 3 4 4 226 3R 26750075 26750093 CATATCAAGTTCCGGGCAC 58 26750283 26754869 TCTTGAACCACACCCTGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9737 FBgn0039758 FBtr0085639 2 1 1 80 3R 26068275 26068296 ATGATCGTCATATCCTAACAGC 58 26068152 26068234 AACGCACATGCTTTAATCC 57 NA Drosophila melanogaster 61 Sry-delta FBgn0003512 FBtr0085558 2 1 1 60 3R 25870137 25870156 TGCAATGTGTCGTTCAAGTC 59 25870179 25870197 TCTCCTTGTGAATGAGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31202 FBgn0051202 FBtr0085510 3 1 1 60 3R 25755623 25755643 TCCGTTTATGAACTGACATCC 58 25755583 25755604 CGGTGAGGGAATATAGAGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon99Cii FBgn0003356 FBtr0085512 1 1 1 60 3R 25749741 25749761 CATTTCCCAAAGTGATTGCAG 58 25749701 25749721 GTTGATGCAGATCATGTTGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15514 FBgn0039712 FBtr0085523 3 1 1 60 3R 25686349 25686439 TTGAAGAAGAGGTCACTTCG 57 25686308 25686326 TTGTCCACAACGTACTCGT 59 NA DesignRelaxed Drosophila melanogaster 61 Cad99C FBgn0039709 FBtr0085488 3 1 1 86 3R 25678840 25678923 ACGTTCACAAGGTCAAAGC 59 25678967 25678991 GGATGAGTATAACAAGTGATATGGC 59 NA Drosophila melanogaster 61 CG7601 FBgn0027583 FBtr0085544 3 1 1 81 3R 25561486 25561504 TGAGTCCTGGCTACATACG 58 25561365 25561441 GTTTCATCCACTTTGCCGT 59 NA Drosophila melanogaster 61 ppk19 FBgn0039679 FBtr0085451 3 1 1 108 3R 25499307 25499325 CGTTGACTTATAACCGCGA 58 25499397 25499464 GGAACTCCATCAATGGGAG 57 NA Drosophila melanogaster 61 CG2310 FBgn0039665 FBtr0085434 3 1 2 76 3R 25318460 25318980 TTATATCTGATACTCCTGCGAGC 59 25318406 25318424 TAGAGTAGGGACAGGGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CheB98a FBgn0261289 FBtr0085312 3 1 1 81 3R 24632859 24632878 ACTCTATGAGCCATGGACAG 59 24632922 24632993 CAGAATGAGCTTCGTCCCT 59 NA Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 3 2 2 88 3R 23532962 23532982 TTCTTGTGCCCTTACTTTGAC 58 23533032 23533108 TCCAATTCGTCTTTGCGAG 58 NA Drosophila melanogaster 61 tau FBgn0051057 FBtr0085197 2 1 1 80 3R 23469686 23470956 AGACATCAAGATCCAAACGC 58 23469625 23469646 GGCTTGTGCTTTACATTATCCA 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 2 5 5 80 3R 23392252 23392335 CCTTGGCAGTATCATCAACG 59 23392191 23392211 AGTGGCAATAGGACCTTAACC 59 NA Drosophila melanogaster 61 Gr98b FBgn0046887 FBtr0085186 2 1 1 80 3R 23369164 23369182 TTCTTAGTTTGCTCCACGC 58 23369225 23369301 GCAGTTGTACGCATTTATGC 58 NA Drosophila melanogaster 61 CG5934 FBgn0039505 FBtr0085158 2 1 1 95 3R 23099599 23099694 ATCCACAGGTGGTCATTCC 59 23099753 23099771 GGTTGGTGAACGATGAACG 59 NA DesignRelaxed Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 1 2 2 109 3R 23094416 23094502 TTCTGGCACCACATTTCTG 58 23094325 23094343 TTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 1 2 2 61 3R 22939932 22940012 AAGACGCATTTACGACGAC 58 22940035 22940055 CTATGAAGTCATCCAGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6283 FBgn0039474 FBtr0085151 1 1 1 60 3R 22846178 22846196 CGTTCTCTACTACGCCGAG 59 22846136 22846156 GTCATGGCACTTAATGGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5491 FBgn0039459 FBtr0085061 1 1 1 61 3R 22690003 22690021 GATCCTCTAAGTCCACGGC 59 22690046 22690064 GTTGTGCTTCTCCATTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 2 2 2 80 3R 22301120 22301203 CCCAAGGATTAATGCTTCGAC 59 22301060 22301079 TCTTGTTCTCCAACTGACCC 59 NA Drosophila melanogaster 61 CG31086 FBgn0051086 FBtr0084989 1 1 1 103 3R 22011374 22011464 CAATCGAAATGGACGGTCAC 59 22011530 22011548 AATGAAGATGGTGTCGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983,FBtr0302197 1 2 2 244 3R 21750624 21750642 ATTATTCCACGGGCAAAGG 58 21750307 21750416 GGAAAGCGACTTAATGTGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG4553 FBgn0039336 FBtr0084839 3 1 1 63 3R 21302321 21302342 CCGTCAGTTTATGATAAAGCAC 57 21302279 21302297 ATGAAGCAAGAGATTGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31370 FBgn0051370 FBtr0290055 1 1 1 89 3R 21129363 21129436 CGCCTTAAAGATTATGAGTTCC 57 21129486 21129504 AGTTTCTTCGTTAGTCGCG 58 NA Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089440 3 1 2 80 3R 20740278 20740298 GATTGTCTCTGTCCTGAATCC 58 20740157 20740238 TCAATGTAAGTCTTCACAGCC 58 NA Drosophila melanogaster 61 CG31105 FBgn0051105 FBtr0273357 2 1 1 80 3R 20683632 20683650 GGGTTTACTTCGGAGACCC 59 20683511 20683593 CTATGGTACTGAATACTTCGAACC 58 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0084659 3 1 3 94 3R 20477270 20477288 TTCAGTTCCATTGTGACCG 58 20477346 20477594 TGGAGAGGGAAGACTCCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666,FBtr0084667 1 3 3 80 3R 20468076 20468150 TTGAAGAATGCTACGAGTACGA 59 20468017 20468036 TAAAGCTGTAGTAGTGGCCG 59 NA Drosophila melanogaster 61 SMC1 FBgn0040283 FBtr0084541 3 1 1 80 3R 19886596 19886618 CCTCCAAGAAGTCAATTAGTCAG 59 19886657 19886742 GGATCTTGGGTCCAAATTCG 59 NA Drosophila melanogaster 61 CG13603 FBgn0039135 FBtr0084510 1 1 1 80 3R 19811939 19811958 AATGGCTTCTGCAACTTTCC 59 19811812 19811898 GCGGGCGTATCTATAAATCTG 58 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 1 5 5 80 3R 18430301 18430378 GCAGCTTTAAGAAGACTCCC 58 18430419 18430439 GCAAATACAGCACAAGATCAC 58 NA Drosophila melanogaster 61 CG7048 FBgn0038976 FBtr0301486,FBtr0084257 2 2 2 126 3R 18313105 18313241 GTTCGAGCAGGAGATTACCA 59 18313330 18313348 CAGGATCTGACGGTTCTCC 59 NA Drosophila melanogaster 61 mats FBgn0038965 FBtr0084229 3 1 1 115 3R 18247752 18247771 ATGATCTCATGAAGCATGCG 58 18247849 18247928 AAAGTCCACGGTGTTAACG 58 NA Drosophila melanogaster 61 CG7080 FBgn0038941 FBtr0084203 2 1 1 75 3R 18155101 18155119 ATGGCTGTTAGTCTCGACG 59 18155227 18155245 AACGAAAGGAGTCTGTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 RpI12 FBgn0038903 FBtr0084166 2 1 1 137 3R 17603312 17603383 TTTCAGCCAGATGTTTACAGC 59 17603195 17603213 ACACTTCCTCTCCACAACG 59 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084167,FBtr0084168 2 2 2 80 3R 17598905 17598923 GCCATTATAACCACCTGGC 58 17598781 17598863 AATATTCTCGTGATGCAAGGG 58 NA Drosophila melanogaster 61 lbe FBgn0011278 FBtr0084091 3 1 1 80 3R 17270853 17270871 AAACGGAGACACTCCTCTG 59 17268107 17270811 TCCAAGTGGGATTTATCTTGC 58 NA Drosophila melanogaster 61 CheB93a FBgn0038888 FBtr0084089 1 1 1 112 3R 17233328 17233349 TGGATTTATCCAACTTCAGTCG 58 17233420 17233499 GCTAACATCAATCTCGACGAC 59 NA Drosophila melanogaster 61 e FBgn0000527 FBtr0084106 3 1 1 80 3R 17056191 17056209 GTGGACATCAAGTCCAAGC 58 17056073 17056147 GGGCAGGTAGTTATCCCTG 59 NA Drosophila melanogaster 61 CG5862 FBgn0038868 FBtr0084049 1 1 1 102 3R 17040885 17040904 GATCTGATCATTCTCGTGGG 58 17040969 17041045 CAGCTACCTTGGTTTCTGG 58 NA Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 1 2 2 80 3R 16457277 16457295 CTGGACTACGCCTATCCAG 59 16457014 16457235 GAGCAAGTCTTCGTCTTTCAG 59 NA Drosophila melanogaster 61 att-ORFB FBgn0067782 FBtr0090034 2 1 1 133 3R 16379398 16379416 CAAGATCTGGGTGGAGGAG 59 16379027 16379303 CGACCACTTCATAGTATTCCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 sqz FBgn0010768 FBtr0083733 3 1 1 168 3R 14993955 14993973 CAACAGCAAATGGTCATGG 57 14994105 14994303 GATTCGGGTCGTACTTCTG 57 NA Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 2 2 2 131 3R 14677253 14677271 ATTTAACTCCTGGTGCGGA 59 14677087 14677159 CTTGCAAGAGATGTTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG18208 FBgn0038653 FBtr0083677 3 1 1 105 3R 14635160 14635181 TCATGGTCTTTGTGTACATACG 58 14633002 14635094 AAGCTCGTTACCTGTTCGT 59 NA Drosophila melanogaster 61 CG7715 FBgn0038646 FBtr0083685 2 1 1 105 3R 14554049 14554142 CCAGAGATGAAAGTATTCGCA 58 14553964 14553982 AGCGGATACTGATCTCACC 58 NA InUTR Drosophila melanogaster 61 CG7706 FBgn0038640 FBtr0083667 2 1 1 130 3R 14504814 14504891 TGAGGATTTGCTGAAACAAGAG 59 14504982 14505000 CATCACCTTCAGCTTGCTG 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083637 1 1 5 92 3R 14403294 14412006 AAGAGGAGAACTGAGGTGG 58 14412061 14412080 TCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 2 1 1 199 3R 14209940 14210046 CATTTGGATGGACGCAACC 59 14209759 14209777 ATCTCCCATAGTTTGGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8064 FBgn0038597 FBtr0083574 3 1 1 160 3R 14109600 14109682 GTGTGGGATTTGCGAATGG 59 14109806 14109824 GGATCGTAGTACCTGTCCG 59 NA Drosophila melanogaster 61 CG12321 FBgn0038577 FBtr0083616 1 1 1 60 3R 14014300 14014320 TTCTAAAGGACAAGCGTACCA 59 14014260 14014280 ATGCTCGGTATGATTACTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14316 FBgn0038567 FBtr0083546 2 1 1 131 3R 13979074 13979092 TTGTTGCTCAGAATTGCGA 58 13979240 13979258 CATCACAATGTCCTCCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7785 FBgn0038564 FBtr0083539 1 1 1 93 3R 13848386 13848462 TCATTTATGTGGGCAATGGC 59 13848516 13848536 TGTTCCAATAGAATGCGTTCG 59 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 2 4 4 80 3R 13678782 13678802 ATCTGCAGATTGTCCTTTCTG 58 13678843 13683518 AGTTGCCGACCTTAAATACG 58 NA Drosophila melanogaster 61 Atg8b FBgn0038539 FBtr0083533 2 1 1 61 3R 13550371 13550392 TTCGTAAACAATGTGATCCCAC 59 13550331 13550349 AAGTGCTCCTGGTACAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 1 1 1 60 3R 13508837 13508917 TTATTTGATCGTCAACTGGCTG 59 13508938 13508956 CTCCACATCGATTTGCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5873 FBgn0038511 FBtr0083442 1 1 1 80 3R 13270191 13270308 CAGGCTGCAAATTAGGCTC 59 13270352 13270370 CCTTCACTCCGTAAACGGT 59 NA Drosophila melanogaster 61 CG10349 FBgn0015350 FBtr0083364 3 1 1 99 3R 12705947 12707202 GATAGCTCGTCGTAATTCTGGA 59 12708169 12708187 CTCATTCAGACCTGGCCTC 59 NA Drosophila melanogaster 61 mRpS33 FBgn0038426 FBtr0083316 1 1 1 73 3R 12262013 12262093 AGTCCATGAAGGTGGTTCG 59 12261958 12261976 CGGATACCAGTTGATCACG 58 NA DesignRelaxed Drosophila melanogaster 61 SF2 FBgn0040284 FBtr0083272 1 1 1 76 3R 12166965 12166983 AAATTGGACGACTCTCGCT 59 12166625 12166643 TTATCACCGCTATCCTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31446 FBgn0051446 FBtr0083163 3 1 1 82 3R 11518928 11518949 CCCAGAGTAATGATTATGTGGC 59 11518990 11519068 CCACCAAATTCCAGAGAACAG 59 NA Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093 2 1 2 87 3R 11188186 11188205 ATAAATTCGCTAGGCAGTGG 58 11188254 11188323 TTAGACTGATGTAACCGCTG 57 NA Drosophila melanogaster 61 ear FBgn0026441 FBtr0083082 3 1 1 139 3R 11147313 11147402 GAAACCCAAACGAGTGGTC 59 11147505 11147523 GCAGTACCAGGTCGTACTG 59 NA Drosophila melanogaster 61 CG6752 FBgn0038296 FBtr0083029 2 1 1 83 3R 11019522 11019540 ATGCTAGGTTGGGATCAGC 59 11019385 11019478 GCGTAGTATCCACTTCATTGAC 59 NA Drosophila melanogaster 61 l(3)L1231 FBgn0086686 FBtr0082975 1 1 1 97 3R 10471110 10471255 CACTAACGATGCTGATGATATAGC 59 10471036 10471054 TGAAGGCATCGTCTGACAG 59 NA Drosophila melanogaster 61 Aats-met FBgn0027083 FBtr0082895 3 1 1 89 3R 10085462 10085546 TGTAAATGCAGCTCCTCAC 57 10085391 10085409 TGCTCTGGATACCTTAGCC 58 NA Drosophila melanogaster 61 RpII140 FBgn0003276 FBtr0082892 3 1 1 80 3R 9953974 9954067 CAAAGCGCTATGGGTAAGC 59 9954111 9954129 AAGTACGTGGGCTAGTGTG 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 3 3 3 94 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536294 9536312 CACTATCGACCTCCACGTC 59 NA Nonspecific Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 2 3 3 98 3R 9485362 9486072 ATGGTGAAGAGATCACCGAG 59 9485283 9485301 TCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 CG9757 FBgn0003060 FBtr0082860 3 1 1 112 3R 9438114 9438132 TGCCGGTGATTAGTAGCAG 59 9438020 9438038 GCCACAGGATCATATGTGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG9757 FBgn0003060 FBtr0082860 2 1 1 112 3R 9438115 9438133 TTGCCGGTGATTAGTAGCA 59 9438021 9438039 CCACAGGATCATATGTGGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG8138 FBgn0038122 FBtr0082732 1 1 1 80 3R 9007302 9007320 TTCAAGGGAACCGATCCAG 59 9007360 9007438 GATAATGGTCGATATCTCCTGCT 59 NA Drosophila melanogaster 61 CG31157 FBgn0051157 FBtr0113394 2 1 1 80 3R 8873580 8873599 CTTCCTGTGGAATCTCTACC 57 8873640 8873738 TATCAAAGGTAACAGACCAGC 57 NA Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 2 2 2 107 3R 8497390 8497408 TTTCTCAACACCGGAGGAC 59 8497479 8497601 ATCAACCAGACCAAACCCT 58 NA Drosophila melanogaster 61 CG5961 FBgn0038056 FBtr0082681 1 1 1 96 3R 8284853 8284933 AGCTTGTGTCAAAGTATGGG 58 8284776 8284794 GATGAACATGTCTCGCCAG 58 NA Drosophila melanogaster 61 CG12224 FBgn0037974 FBtr0082505 3 1 1 82 3R 7807617 7807637 AATTAGCTATAGGTGGCTCCC 59 7807481 7807574 CTTTAGGGCCATAAGGATGC 58 NA Drosophila melanogaster 61 CG18547 FBgn0037973 FBtr0082506 3 1 1 80 3R 7805236 7805311 GAAGACTCGATACGGTCCT 58 7805174 7805195 ACTTGAAGAAATCCAGGTACTC 57 NA Drosophila melanogaster 61 CG14720 FBgn0037940 FBtr0082428 3 1 1 61 3R 7537744 7537764 CCCTATGGAGCATTATATCGT 57 7537786 7537805 ATGTTCTCGATGACCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14718 FBgn0037939 FBtr0082426 2 1 1 60 3R 7526873 7526892 CGGGATCTTCAGATGAACCA 59 7526911 7526933 CTATATCTCCATTCAGCTCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6567 FBgn0037842 FBtr0113217 1 1 1 133 3R 6679473 6679494 CATTTCATCCATTGAGGAACAC 58 6679300 6679381 TCATGCCAAATACACTCAGAG 58 NA InUTR Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 1 2 2 81 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515483 6515979 CCCAGAATTTGGCATCTGG 58 NA Nonspecific Drosophila melanogaster 61 CG12592 FBgn0037811 FBtr0082233 2 1 1 284 3R 6165652 6165670 GAAGGTAATTCAGCGCCAC 59 6165982 6166000 GTAGCCAGCATTTGTTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG9427 FBgn0037721 FBtr0082104 3 1 1 108 3R 5451275 5451398 TTGATCAGTGTGCCAATGAG 58 5451186 5451204 TACTGTTTGGTCACCAGCT 58 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117,FBtr0082118 3 3 3 85 3R 5367294 5367414 GGAACTTGAATAACCACTTTGG 57 5367230 5367249 AAAGTTGTACGAAGAACCCT 57 NA Drosophila melanogaster 61 Tcp-1eta FBgn0037632 FBtr0081918 3 1 1 113 3R 4628713 4628804 TCAACCTCTTCCAAGGCTG 59 4628880 4628899 CGATCATAATTGCGTCGTGG 59 NA Drosophila melanogaster 61 CG34301 FBgn0085330 FBtr0112497 1 1 1 68 3R 4599245 4599263 TGAAGACCTTTCTGGAGGC 59 4599295 4599382 ATTTGGTTTCTGGGCTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG8223 FBgn0037624 FBtr0081915 3 1 1 81 3R 4578769 4578787 CTGAGGTTCAGACTGAGCT 58 4578829 4578912 AGTGCTTTCTCATAATCTTCGC 59 NA Drosophila melanogaster 61 CG8021 FBgn0037602 FBtr0081878 3 1 1 66 3R 4477043 4477061 AACCAGAACACCCATTTCC 58 4477091 4477109 TCTGAGGACTTTCATTCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9601 FBgn0037578 FBtr0081854 1 1 1 60 3R 4168742 4168763 ACTATCACCGTCAGAGAAATCC 59 4168703 4168723 GATAACCAGCTTACCATTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11694 FBgn0037571 FBtr0081859 1 1 1 60 3R 4137732 4137750 TCTCAGATCATTCTGCGGG 59 4137690 4137711 ATTAGAGCAGCTATCTCATTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31464 FBgn0051464 FBtr0081830 1 1 1 60 3R 4117194 4117212 CCCTCGATCAGAAGTTGGA 58 4117236 4117254 TGCTGATGGTCATCCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf7 FBgn0024909 FBtr0081756 1 1 2 111 3R 3733210 3733292 AAATTTGTTGATGCGGCTG 57 3733366 3733385 AGAGATGGGAGTTAGATGGG 58 NA InUTR Drosophila melanogaster 61 nxf4 FBgn0051501 FBtr0081583 1 1 1 60 3R 3172675 3172694 TATGGATGGTATCGGGTCCT 59 3172715 3172735 GCACTCGATTGAATGTTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 2 3 3 158 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651401 2666964 ATTCACAGTACTCGTCCCG 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 3 1 2 73 3R 2569652 2569737 GATGTATCCTTGCGTCGAG 58 2569597 2569618 TCTTTGATTTCTCCGAAGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 Hr83 FBgn0037436 FBtr0081713 2 1 1 60 3R 2175565 2175583 GAGTCCCTAATCCTGTGCA 58 2176040 2176058 CCAGGATAACGGCATACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10298 FBgn0037432 FBtr0081710 1 1 1 82 3R 2168806 2168824 CGTGTGCTTCTCTAAGCAC 59 2168870 2168941 CACCACCATAAGTCACCGT 59 NA Drosophila melanogaster 61 Osi3 FBgn0037411 FBtr0078594 1 1 1 80 3R 2042478 2042498 GAACCATCTGTACCTGAACAC 58 2042538 2043056 GGTACCATTGAGATATTCCCG 58 NA Drosophila melanogaster 61 CG31559 FBgn0051559 FBtr0078616 1 1 1 60 3R 1981914 1981932 GGAATAGCCACGTTCTTGC 59 1976755 1981893 CTTTCTCCTTGAAGTTCTTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Os-E FBgn0010403 FBtr0078655 3 1 1 128 3R 1802253 1802323 TACTGATGAGGCCATCAAGG 59 1802144 1802162 TTCTCCATGTGGACATCCC 59 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 2 2 2 82 3R 1493659 1493739 TTCGAAGGATATGTTCAGTTCG 58 1493598 1493617 TTTCGGACCAACTTATTGCC 58 NA Drosophila melanogaster 61 CG33293 FBgn0053293 FBtr0078824 1 1 1 69 3R 1066279 1066362 GAGATTCCTTCCATTATGGAACG 59 1066232 1066250 ATCCGGACATGATCCAGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2016 FBgn0250839 FBtr0078847 3 1 1 114 3R 783153 783230 GGAGTACGAGGGAGTTAAGG 59 783058 783076 CTCCTTCACGTTGAAGTCC 58 NA Drosophila melanogaster 61 CG14657 FBgn0037282 FBtr0078875 2 1 1 65 3R 645547 645565 GATGATGAGGACAACGACG 58 645444 645518 TGGCAATGTCAAGTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568,FBtr0112567 1 2 2 104 3R 363604 363622 TTGATTTGACGCATGTGCA 59 360239 363536 CGCTTAAGTCCACATCACG 59 NA Drosophila melanogaster 61 Fip1 FBgn0037255 FBtr0078928 3 1 1 81 3R 312602 312679 AAGAAAGATCAGCTGAGAAAGG 58 312721 312739 TATCGTACCACCTGGTGTG 58 NA Drosophila melanogaster 61 eIF3-S10 FBgn0037249 FBtr0078944 3 1 1 85 3R 258184 258252 TTATTCGTGAAGTGGTGCG 58 258117 258135 GAAATCCACCTCCAACCAG 58 NA Drosophila melanogaster 61 CG14645 FBgn0040687 FBtr0078908 1 1 1 60 3R 161044 161068 GATTCATGGATAGTCTCAAGAACTG 59 161086 161104 ACTGGTTTCTCCCATTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr014:3L FBgn0046272 FBtr0091955 3 1 1 210 3L 14028016 14028035 AGCTTAAGCATTGCTTGGAC 59 14027825 14027844 ACTATTGCAATCTGCTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111144 2 1 3 61 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24531016 24531036 ACGAAGGGTCATTATTACTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG40298 FBgn0058298 FBtr0111169 2 1 1 60 3L 23720612 23720634 GTCAACTTCTTACAGGATCAGTC 59 23720651 23720672 TAAGATTATCCACAGTAGCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11131 FBgn0037204 FBtr0078558 3 1 1 150 3L 22892366 22892525 AAATGAAACTCTTCACCGCC 59 22892638 22892656 TATCCGTTCTCCGAAAGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14562 FBgn0037142 FBtr0078472 3 1 1 120 3L 21941696 21941716 CCCAATTTAATCGGCATTGAC 58 21941798 21941961 TAAACCCGCAAGACTTTCC 58 NA Drosophila melanogaster 61 DNApol-eta FBgn0037141 FBtr0078489 2 1 1 113 3L 21933973 21933991 CAAATTCGGTGAGGTGGTG 59 21933820 21933897 AGCCAGGTTCCATTCTTCTC 59 NA Drosophila melanogaster 61 Atox1 FBgn0052446 FBtr0078426 3 1 1 150 3L 21634452 21635081 CAAACTGGGCGATAAGGTC 58 21635194 21635213 CTCGTCTCATTTCTTCACCC 58 NA InUTR Drosophila melanogaster 61 CG7324 FBgn0037074 FBtr0078404 3 1 1 80 3L 21334383 21334478 TCGAGTTCATGTTCCTTTGAG 58 21334323 21334341 AATGTGTTCATCAGAGCGG 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678 2 2 3 166 3L 21321362 21322909 TGGGCAAGGTCATAATGCT 59 21325732 21325750 CCAGATTTGCAGCTTGACG 59 NA Drosophila melanogaster 61 Cpr78Cb FBgn0037068 FBtr0078337 2 1 1 213 3L 21288617 21288635 GTGTATAGCTGACAGTGCA 57 21288895 21288913 AAACACTCCTTCGTCATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9389 FBgn0037064 FBtr0078415 3 1 1 98 3L 21262585 21262605 AAGCACACGAATGATATCGTC 59 21262429 21262527 GGCAATAAATTGGTGATTGGG 58 NA Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317,FBtr0078316 3 2 2 101 3L 21190877 21190897 CTGTACAAGCATCTTTGGAGC 59 21190674 21190693 ATTCCAAGCCATCAATTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 gogo FBgn0052227 FBtr0074848 2 1 1 80 3L 20266309 20270293 ATTCTGTGAGGGTCCTTCG 59 20266247 20266267 GAAGTCTCGTAAATGCAGTCC 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 3 3 3 81 3L 19809756 19809834 AAAGGAGATTAAGCACCTCGT 59 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074942 2 1 3 291 3L 19594927 19594945 ATCGAAACGGAGTCACTGG 59 19595875 19595893 TGCTTCTCAGCTTGAAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14100 FBgn0036889 FBtr0074971 1 1 1 80 3L 19582429 19582510 GCTTACCGTTTCTTAAACTTGG 58 19582370 19582389 ATTCAAGCTATCGATGCCAG 58 NA Drosophila melanogaster 61 CG11577 FBgn0036847 FBtr0075034 3 1 1 60 3L 19088738 19088756 GAAACCATCAGCGAATGGT 58 19088696 19088715 AGAGATGCTTCTTCAGTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18363 FBgn0036808 FBtr0075090 2 1 1 80 3L 18690908 18690928 CCAACGGATCTGATTAACGTG 59 18690784 18690869 GAAGACATGCTTATAGTTGCGT 59 NA Drosophila melanogaster 61 Cyp12c1 FBgn0036806 FBtr0075091 3 1 1 104 3L 18679021 18679039 GAACCCGTCATCCACTACC 59 18678758 18678778 CACGGCACTTCTATTCTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32199 FBgn0052199 FBtr0075106 1 1 1 87 3L 18606823 18606841 TTCAACTTGAATCACGCCG 59 18606889 18606970 TCGATATTATCCATCTGGAGCC 59 NA Drosophila melanogaster 61 mus304 FBgn0002901 FBtr0075122 3 1 1 96 3L 18103565 18103583 GGATTGAAGCCCTTAAGCG 59 18103641 18103740 AGTAAGGAAACCTCACCAGAC 59 NA Drosophila melanogaster 61 CG32192 FBgn0052192 FBtr0075147,FBtr0300047 2 2 2 199 3L 18033742 18033760 TTTACGTATGTCCTCGCAG 57 18034086 18034106 TGAGAATATCCAACTCTGCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6034 FBgn0036750 FBtr0075194 3 1 1 60 3L 17739538 17739557 AATTGACGAACGCATTTGAG 57 17739497 17739516 TTAAAGGCATCACCTACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 3 2 3 180 3L 17636818 17638000 GTTGCAACACCGTAAAGGT 59 17636656 17636675 CAAGGCGACATGTTCATACC 59 NA InUTR Drosophila melanogaster 61 CG7497 FBgn0036742 FBtr0300284 1 1 1 135 3L 17629625 17629802 TCTACCACAAGCACATTACCT 59 17629899 17629917 TTAAGCTGGTCCGGATTGG 59 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 1 2 2 83 3L 17365247 17365329 CTACTGATTTCGGCATTCCTC 58 17365184 17365202 AGATGGGCCGTTGATTACC 59 NA Drosophila melanogaster 61 Fit2 FBgn0036688 FBtr0075275 1 1 1 60 3L 17018810 17018832 GAACCATCACGTAGATCATACAC 59 17018852 17018870 GGAAGTTTCAATGCCCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 3 3 10 194 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923955 16923974 GGGTTGATAGGCTCCATAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Syx8 FBgn0036643 FBtr0075365 3 1 1 84 3L 16579477 16579551 GGACCAGAACAATATCCTTGAC 58 16579414 16579432 TCCAATGCTCTGTGTTTCC 58 NA Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 1 1 1 68 3L 16464834 16464921 CACACTTCCGTGACTACAC 58 16464784 16464802 GGACTATCTGCTCCGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18814 FBgn0042137 FBtr0075385 2 1 1 113 3L 16363480 16363498 AGTGAACATTTCCTCGGTG 57 16363575 16363648 TAATGGATGGGACTAGCCA 57 NA Drosophila melanogaster 61 CG13044 FBgn0036599 FBtr0075470 1 1 1 81 3L 16296125 16296209 TCAAATTGTTCGTTCTCGCT 58 16296063 16296081 CTGTAGACCAGAGGAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG13068 FBgn0036588 FBtr0075464 3 1 1 261 3L 16262533 16262621 TCATGTTCAAGCTGTCTGC 58 16262846 16262864 ACTGGAGCGGTATAAGCAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 2 1 1 116 3L 16225422 16225496 ATTAACAGCTTGGTGACCG 58 16225574 16225594 CTGAGGATTCTTGTCTTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33690 FBgn0053690 FBtr0091670 1 1 1 94 3L 16194899 16194984 CCTATGATCACGATCTTATCGT 57 16195039 16195057 GGCATAATCTCCGTTTGGT 57 NA Drosophila melanogaster 61 CG5414 FBgn0036569 FBtr0302328 3 1 1 86 3L 16093561 16093639 GTTCTGGAGAACAAGATTGCA 58 16093687 16093705 ATCGTGAAGGACGAAGGTG 59 NA Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075535 1 1 2 86 3L 15832661 15832679 TAGAGCGGTGCTATGATGG 59 15831837 15832611 TTAAGGAGATGCGGAGCTC 59 NA Drosophila melanogaster 61 CG12301 FBgn0036514 FBtr0075564 1 1 1 64 3L 15574372 15574390 AACAGAGATCTGCGGAGAC 59 15574476 15574495 CGCAGTATTTACGTAAACCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32147 FBgn0047178 FBtr0075647 2 1 1 82 3L 15136800 15136906 CCAGCCATATCTTGTTATCCA 57 15136738 15136756 ACTTGTGATTGTACGCCAG 58 NA Drosophila melanogaster 61 CG13474 FBgn0036439 FBtr0075711 1 1 1 60 3L 14690019 14690038 TTTCAACTGAGCAATAGCGA 58 14689978 14689999 AGTCACAACTTCCTATAGACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 1 2 2 102 3L 14532077 14532095 CTACAAGGGTCTGGTTCCC 59 14532159 14532662 CACCACATACTTGTAGAGCAG 58 NA Drosophila melanogaster 61 stwl FBgn0003459 FBtr0075728 2 1 1 168 3L 14402717 14402735 CCTCCGAAGTTGGAGAGTC 59 14399790 14399808 ATGTTTAGATGGCGGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Sox21a FBgn0036411 FBtr0075748 3 1 1 95 3L 14099677 14099697 AAATTACTCACCGAAGGACAG 58 14097948 14097966 TCGATACTTGTAGTCGGGA 57 NA DesignNoJunction Drosophila melanogaster 61 Hsc70-1 FBgn0001216 FBtr0075761 1 1 3 106 3L 13967868 13968827 GATCTTTGTCTCAGGGTCC 57 13968895 13968915 GGGATATTATGTGGCATTGTG 57 NA InUTR Drosophila melanogaster 61 CG32132 FBgn0052132 FBtr0075800 2 1 1 60 3L 13865641 13865659 ACAGCCAGTATGGTAGCAG 59 13865599 13865617 GGATGCGTATGCTGATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14105 FBgn0036359 FBtr0075857 2 1 1 101 3L 13419259 13419280 GTGTCCTTTATCGTAAACTGGA 58 13419124 13419198 TTTCCACCAACTGTTCTCTG 58 NA Drosophila melanogaster 61 CG32119 FBgn0052119 FBtr0075867 1 1 1 150 3L 13241132 13241150 CTGGAAGAGGAGATGCAGG 59 13240946 13240964 CACATTTGCAGGGACACTC 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL20 FBgn0036335 FBtr0075897 2 1 1 93 3L 13010841 13010859 GTCTTCCTGAACCTTCCCT 58 13010703 13010784 TTCTATAATGCGCTGCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pbgs FBgn0036271 FBtr0076011 2 1 1 60 3L 12263571 12263590 TTCCTATCCGTATCACACGC 59 12263530 12263549 ATACAGCATAGCGAACTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim13 FBgn0036204 FBtr0076089 3 1 1 60 3L 11767449 11767469 TGAAACAACAGATCGCATTGG 59 11767409 11767427 CACTTCTCCGTCATCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33268 FBgn0036177 FBtr0076145 3 1 1 74 3L 11584172 11584190 ACTACCACGACAACTTCGT 59 11584116 11584134 GTGCTCCTTCTTGGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076169,FBtr0076168 1 2 2 60 3L 11247413 11247432 GCAGTTCATGAAGAGTTTGG 57 11247454 11247473 CTTGGTGATCGTATACTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42519 FBgn0260394 FBtr0300667 1 1 1 82 3L 10618426 10618504 TCATTGCCCAATCTCTTGAC 58 10618363 10618381 TTCAGCATCAACAGGTAGC 57 NA Nonspecific Drosophila melanogaster 61 can FBgn0011569 FBtr0076299 1 1 1 86 3L 10259483 10259504 GCCGATTTATGATGAAGAAACC 58 10259362 10259436 TCTGCGTCAGTTACTTCCT 58 NA Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 1 2 2 80 3L 9887378 9887457 TTGATTTGCCCATGATCCG 58 9887316 9887334 CATTGGGATGATAGCTCCG 57 NA Nonspecific Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362,FBtr0076363,FBtr0076365,FBtr0076364 1 4 4 80 3L 9854152 9854171 AGGACATTGATGTCTTCCGG 59 9854029 9854110 GCAGATTGCCAATGGTAGAG 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0112791 1 1 6 101 3L 9043447 9057571 GAAATACGCAAACAAGACACC 58 9043366 9043384 CTTCAACAGCGACTTGGAG 58 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 3 3 3 83 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607901 8607977 CTCCACAGTCCATCATTGC 58 NA Drosophila melanogaster 61 Unr FBgn0035895 FBtr0114592,FBtr0076661 1 2 2 80 3L 8430189 8430208 ACGATGTGGAAGGTAATGTC 57 8430062 8430149 CTAGATTACCTCTTTGGTTCGT 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0076670 2 1 9 280 3L 8351841 8351862 CGTATTGTTTCACATTGGTGAC 58 8350989 8351118 TTGATCTTCTGGGCCATCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 DNApol-alpha50 FBgn0011762 FBtr0076603 1 1 1 80 3L 8336222 8336296 TCGTATGGATCATCCGAGG 58 8336335 8336358 GTAACGTATGTAGATATCGTCCTG 58 NA Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 3 1 1 87 3L 8322329 8322348 AATCAGCCTGAAGTTACACC 57 8322398 8322467 AGGAATATGTGTTGGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7197 FBgn0035866 FBtr0076715 2 1 1 60 3L 8292004 8292025 CTATGCCAATAAGCAGGATCTC 58 8291965 8291984 CAGTTGTCGTGAGATTTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7366 FBgn0035855 FBtr0076721 1 1 1 60 3L 8195190 8195208 CAAACCCTTCACCGAACTG 59 8195148 8195167 GTACTCGTTCAGCAAATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8005 FBgn0035854 FBtr0076695 3 1 1 80 3L 8191515 8191534 GAATCCTATGTGAACACCGG 58 8191577 8191653 CCTGCAATCCAGCATTCTG 59 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 2 2 2 81 3L 7750856 7750940 GCTGTAATGATATCGACGAGTG 59 7750979 7751000 CATATGAATTCACCAGGAAGGT 58 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 1 3 3 80 3L 7558021 7558041 CCATCAATAAGTGCGATTGTC 57 7558083 7558163 GGCATTCGTCGATATCGAG 58 NA Drosophila melanogaster 61 CG8539 FBgn0035791 FBtr0076831 2 1 1 80 3L 7491071 7491091 AAACGGGCTGTAATGTATCTC 58 7490928 7491031 CACTGGATCTGTATCGTAGAC 57 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 1 5 5 130 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 Surf1 FBgn0029117 FBtr0076897 2 1 1 80 3L 6951912 6951992 GGCTCTACCAGACGATCTC 59 6952036 6952054 TTGTCGTGAAGGAAACGTC 58 NA Drosophila melanogaster 61 Mdr65 FBgn0004513 FBtr0077011 3 1 1 80 3L 6237402 6237423 GGAAACTTACCTTAGCTGTGAG 58 6237283 6237362 GCTTGCCTTGAAACTTAGCT 59 NA Drosophila melanogaster 61 Mdr65 FBgn0004513 FBtr0077011 2 1 1 80 3L 6237404 6237425 CTGGAAACTTACCTTAGCTGTG 59 6237285 6237365 TTGCCTTGAAACTTAGCTACG 59 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0077055,FBtr0273355 1 3 3 90 3L 6105513 6107403 AATCGCAAGGTTACAGCTC 58 6109056 6109076 GGTCCGAACATTTGATATGGA 58 NA Drosophila melanogaster 61 CG18586 FBgn0035642 FBtr0300903 2 1 1 81 3L 5866834 5866855 GCCAAACTTATCAATCGGAGAG 59 5866897 5866972 CTCCGTGATCGAGATCTGG 59 NA Drosophila melanogaster 61 Lkr FBgn0035610 FBtr0077149 1 1 1 80 3L 5508765 5508854 AGATTTCGCGAGAACAATGAG 59 5508705 5508726 TTGCAATTGATCATCGGATAGG 59 NA Drosophila melanogaster 61 Rop FBgn0004574 FBtr0073263 2 1 1 60 3L 4137503 4137521 CTGACCAAGCTGTTTACGC 59 4137461 4137479 GGTTACGCACCATATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073178 3 1 3 122 3L 3902596 3902614 AAGTAAAGCGCAATCAGCG 59 3901736 3901757 CAAAGTCTTCACAAAGATCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 2 2 2 73 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466962 ATATAGTAGACGGCCAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 2 2 2 160 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237517 3237535 ATCTCCTCCGGAAACATGC 59 NA Drosophila melanogaster 61 CG33159 FBgn0053159 FBtr0073104 2 1 1 60 3L 3204330 3204350 TATTTCGGAAGTTCCGTACCT 59 3204290 3204311 TCCTCCACAGATAAAGTAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42525 FBgn0260430 FBtr0300854 2 1 1 80 3L 3189235 3189353 CAACGGATATAGTAACAGATTCGAG 59 3189179 3189198 TGGAATCGGTAGTTTCAGCT 59 NA Drosophila melanogaster 61 CG12187 FBgn0035367 FBtr0072945 3 1 1 104 3L 2673139 2673160 ATCTCTTCGATGAGAACCTACC 59 2672885 2673074 TTTCGGGTTCCGCTATGAG 59 NA Drosophila melanogaster 61 CG1143 FBgn0035359 FBtr0072937 1 1 1 80 3L 2645452 2645638 GTTGCTAACCACCTTGCTG 59 2645681 2645700 AAGCCCGAGAAGATATCACC 59 NA Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 2 2 2 211 3L 2587882 2588094 GTTGTCAAGGACATCATCCA 57 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 ACXD FBgn0040507 FBtr0072874 2 1 1 80 3L 2242203 2242221 ATGATCATAACGTTCGGCA 57 2242264 2242344 CCGTTTCCAGTTGTAATCCA 58 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 1 4 4 80 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 mthl9 FBgn0035131 FBtr0072574 2 1 1 80 3L 330978 331057 GAAACATAGGATTTCTGGCCT 58 330918 330937 TGAGCAGAAAGTCAAGACTG 57 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 3 3 3 80 3L 185059 185138 AACATCTTTCAGTACGCTGG 58 185179 185199 CACCAATTTAGGAGCTAGACC 58 NA Drosophila melanogaster 61 snoRNA:Me28S-U1130 FBgn0086022 FBtr0114298 1 1 1 68 2R 14786961 14786980 ATGAGGGAAATTCATGAGGG 57 14787010 14787029 GAAATGAGTTTCCTGCTGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp60F FBgn0259968 FBtr0300313 2 1 1 70 2R 21060173 21060191 CTCAGAAGCTTTGCTACCA 57 21060069 21060088 AGGATGGACAGAATAAGTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 1 4 4 90 2R 20420157 20420428 TGTTACGATGTCACCGGAC 59 20420482 20420500 TCAGGAAGATCATGGCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG4612 FBgn0035016 FBtr0072346 3 1 1 112 2R 20412381 20412400 CCACGCACTTCAAGAATCTG 59 20412057 20412306 CAGCATGAGCTTGTGACTG 59 NA Drosophila melanogaster 61 Crtp FBgn0029501 FBtr0072299 3 1 1 132 2R 20382802 20382821 AGTACAAGTGTCTGCAGGAC 59 20382916 20382986 CAAATCCGCTCGTGTTCTG 59 NA Drosophila melanogaster 61 CG3362 FBgn0034988 FBtr0072261 1 1 1 60 2R 20084038 20084056 ACACCTTCAACAAGAACGA 57 20084079 20084098 TGCACCAAGTCGTAATACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rap2l FBgn0025806 FBtr0072177 1 1 2 80 2R 19952565 19952584 CAGCACCCATCCTACTAGTC 59 19952627 19952717 CCAAGGCATTACCTTCAGC 58 NA Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 1 2 2 107 2R 19868171 19868190 AAATGACACTGAGCATGGAC 58 19868260 19871076 GTTTCTTGGTTCGAGTCGC 59 NA Drosophila melanogaster 61 PHDP FBgn0025334 FBtr0072224 1 1 1 80 2R 19771318 19771339 CCACTACCCAGATATCTACACC 59 19770991 19771277 TGGAACCAGACCTGAACTC 59 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100330,FBtr0100329 2 3 3 80 2R 19645009 19645230 CGGAAATGGTTATCACTGTCTG 59 19644950 19644970 CGATAGTTGTGTCCGTAATCG 59 NA Drosophila melanogaster 61 CG30184 FBgn0050184 FBtr0072065 1 1 1 60 2R 19452032 19452051 CGAATCAGAAGATGCATCCA 58 19452074 19452092 CGGCTGATGAAGTACAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30181 FBgn0050181 FBtr0072116 2 1 1 80 2R 19426425 19426504 AGGACTTAGTGGTATCCTTTGG 59 19426366 19426384 CATGGACCATCTCCACCAG 59 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111,FBtr0072024 3 2 2 102 2R 19310033 19310051 CCTACTCGTGGTCATGTCC 59 19309786 19309967 CAGCAGCGTATCATTCAGC 59 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072030 2 1 2 113 2R 19273830 19273928 ATTTGTGAGCTGCGAATTCC 59 19273736 19273754 GGAATTGGGCTATCTTCGC 58 NA InUTR Drosophila melanogaster 61 CG30410 FBgn0050410 FBtr0301852 1 1 1 60 2R 19243078 19243099 CATCTGATACTCGACTACAACC 58 19243119 19243138 CGTCTATGTTGGGATTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13541 FBgn0034841 FBtr0072001 1 1 1 105 2R 19172288 19172306 GAGACCCTTATCCAGCGAC 59 19172438 19172456 CACGGGATATGTGGATTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9877 FBgn0034819 FBtr0071980 1 1 1 83 2R 18973715 18973733 CTGCTATCGTGTTTGTCGT 58 18973650 18973668 AGCCACCATATCCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071894 2 1 2 82 2R 18729645 18729744 CTGATAAGCACAATCGCGG 59 18729790 18729808 GATGAATACCACGTTGCCC 59 NA Drosophila melanogaster 61 CG42284 FBgn0259179 FBtr0299663 2 1 1 80 2R 18711276 18711295 AAAGAACGACATATCGCCCA 59 18711338 18711411 AAGTACCGAACGATGTCCG 59 NA Drosophila melanogaster 61 Obp58d FBgn0034770 FBtr0071872 2 1 1 85 2R 18594570 18594644 TGTAACACATCGAGGGCTG 59 18594691 18594711 GGTGAGTGTATAACGAAGCAC 59 NA Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 2 2 2 75 2R 18543371 18543389 GAAACCGTGGAGATGACAG 58 18543245 18543332 AGATGGGAAAGCAACAGGA 59 NA DesignRelaxed Drosophila melanogaster 61 RpS24 FBgn0034751 FBtr0071935 3 1 1 62 2R 18528523 18528541 CAGGAAACAGATGGTCTGC 58 18528479 18528497 ATCTCGGTCTTGTTCACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071857 2 1 2 80 2R 18496124 18496198 GTAAGTTGGTGCAATTGAAGC 58 18496239 18496258 GATCATTCTCCAACTGCGTC 59 NA InUTR Drosophila melanogaster 61 CG4294 FBgn0034742 FBtr0300409 1 1 1 80 2R 18489496 18489517 AAACGACATAAACTCCATACGG 58 18489305 18489455 TCCCTCGTCGATTAACCTG 58 NA Drosophila melanogaster 61 CG3927 FBgn0034739 FBtr0071853 3 1 1 83 2R 18483168 18483186 TGGAGCCATCAGGAATAGG 58 18483233 18483378 TCCATATAGGCGACTTCGC 59 NA Drosophila melanogaster 61 CG4554 FBgn0034734 FBtr0071833 1 1 1 80 2R 18378869 18378888 GCTGATTCGCAATATACGCT 59 18378929 18379010 AACATAGCCGTTCTTATGCTG 58 NA Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776,FBtr0071775 2 2 2 80 2R 18168314 18168332 GAGCGAGATTGTTCAGACG 58 18168373 18168507 ATTATTAATGAGCCTCTGGCTG 58 NA Drosophila melanogaster 61 CG3290 FBgn0034711 FBtr0071782 1 1 1 115 2R 18094906 18095077 GATTGAGCAGAACCTACTGC 58 18094810 18094828 TACTGCTGCACTTACTCCG 59 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299557 1 1 5 83 2R 17956103 17956121 GATTGCCGTGGACTTTGAG 59 17956166 17956259 ACAAGCACTGCAATTATCTCC 59 NA Drosophila melanogaster 61 CG4363 FBgn0034663 FBtr0071740 3 1 1 103 2R 17722058 17722138 GATTCCAGCAAGGATTCCA 57 17721973 17721994 GAGGATTTCACATAGCAATACG 57 NA Drosophila melanogaster 61 Xbp1 FBgn0021872 FBtr0300236 2 1 1 137 2R 17031625 17031710 GAGAAAGTGCAAAGAAAGAAGC 58 17031805 17031826 GCACTTGTTCTGTAGTATTTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 1 3 3 87 2R 16891592 16891668 GCGATCAGACCTTCAAGTG 58 16891719 16891737 TTTCCCTTCTTAGGCGGAG 59 NA Drosophila melanogaster 61 Pros29 FBgn0261394 FBtr0071522 1 1 1 153 2R 16882806 16882962 CTGAACGACAACATGGTCTG 59 16883078 16883096 GTTTGATGTCGCAGAGGTG 59 NA Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0071519 2 1 2 210 2R 16831644 16832349 CTCTGGTCGTTGACAATGG 58 16832523 16832541 GTGATGATACCGTGCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30154 FBgn0050154 FBtr0086215 2 1 1 112 2R 16420937 16420955 TCTGCTTCGTCGTTCTCAG 59 16421099 16421118 ATTGTCGGTGGACTCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11048 FBgn0034487 FBtr0086316 1 1 1 86 2R 16128198 16128216 GATGTGACGTCTTCACGAG 58 16128266 16128405 CTGTTGTGGGATCACATGG 58 NA Drosophila melanogaster 61 18w FBgn0004364 FBtr0086309 2 1 1 60 2R 16000275 16000293 TACGAATTGCCCAAAGGTC 58 16000314 16000335 CACTCAGATCGAGAACTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 3 1 2 212 2R 15671386 15671469 GCAGCAAGCCAACATAGAC 59 15671192 15671211 TTAATCTTGTCGGTCAGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 2 1 1 60 2R 15586700 15586780 CTAAGCGAACTAGTAGCGG 57 15586658 15586677 GTTGAATTTGCTTGTAGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086537 3 1 4 103 2R 15336244 15336842 CCCAGACATGTTTCTGGGA 59 15336159 15336177 GTACACATTGATGCGCTCC 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0113097,FBtr0113098 3 2 4 81 2R 15196583 15196601 TTTGGACAAGTCGCTTACG 58 15196009 15196538 CACGAAGATCACTGTGGAG 58 NA Drosophila melanogaster 61 CG15071 FBgn0034377 FBtr0086605 3 1 1 60 2R 14584567 14584587 CGTTAAGGAGGATGTCTTTCG 58 14584603 14584627 CCTTAGAGCATTCACTGTATATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086700,FBtr0086701 3 2 2 60 2R 14425570 14425589 CGAGCACATGTTGATTCTGG 59 14425610 14425630 GGCAGTGATGTACTTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42510 FBgn0260236 FBtr0300645 3 1 1 172 2R 14411204 14411747 AATATGCAGGACGACGAGG 59 14411881 14411901 ACATTTAGCACGTTCGATGTC 59 NA Nonspecific Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 2 4 4 80 2R 14363666 14363686 AGGCTATGTTGGTTAAGTGGT 59 14363164 14363627 CGTTCATAAGGCGATAATCCTG 59 NA Drosophila melanogaster 61 GstE6 FBgn0063494 FBtr0086674 2 1 1 60 2R 14293753 14293774 TGCCATTATTGCCTATTTGGTC 59 14293795 14293813 ATCTTTCGGGTATAGGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nopo FBgn0034314 FBtr0086750 1 1 1 86 2R 14069011 14069029 AGGAGATCGAACTAAAGCG 57 14069139 14069212 AAGCTTGTAGCTTCTCCTG 57 NA Drosophila melanogaster 61 Nup75 FBgn0034310 FBtr0086775 2 1 1 80 2R 14053259 14053340 CAGAACAACATCGATCTTCCG 59 14053199 14053219 CATATTGTGGGACGTCATCAG 59 NA Drosophila melanogaster 61 Pcl FBgn0003044 FBtr0086735 3 1 1 81 2R 14025077 14025095 CTGCAAATGTCGGAACTGG 59 14025139 14025213 AACAAAGAACATATCGCCGC 59 NA Drosophila melanogaster 61 CG5770 FBgn0034291 FBtr0086812 2 1 1 108 2R 13932205 13932223 AAGACCTATCAGTCCGACG 58 13932052 13932133 CATTATCAGCAGCATTCGC 57 NA Drosophila melanogaster 61 CG5084 FBgn0034288 FBtr0086804 3 1 1 110 2R 13906782 13906800 ATCAACCAGATCCGTCTCC 58 13906873 13906952 CTTGTCGAAAGTGGACACAG 59 NA Drosophila melanogaster 61 CG14490 FBgn0034281 FBtr0086801 3 1 1 154 2R 13748587 13748605 TCTACTTTGGTCAGTGGCT 58 13748844 13748862 AAATTGACCCACGTAGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0114614,FBtr0086798,FBtr0086797,FBtr0086795 3 4 5 258 2R 13745255 13745274 CTAAAGGCATCCAGCAAGAC 59 13746955 13746973 TGTACCAATGGAGACGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 1 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific Drosophila melanogaster 61 CG6385 FBgn0034276 FBtr0089560 3 1 1 151 2R 13642249 13642320 GAGTACCACGATCTCATCG 57 13642116 13642134 GGATCCCTGTTGGTATTGG 57 NA Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 3 2 2 104 2R 13623914 13623932 GAAGTCTTCGCTACTGCAC 58 13623773 13623850 GGATCAGATCCATAACTCATTCG 59 NA Drosophila melanogaster 61 mthl4 FBgn0034219 FBtr0086957 1 1 1 100 2R 13333412 13333489 GATCTACACTGGCGATATGAC 58 13333332 13333350 TGTAAATCGCCGAAAGGAC 58 NA Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 2 2 2 80 2R 13320625 13320706 AATCCGAAGAGATCTAGAACCA 58 13320566 13320586 ATTGGACGATGTAGACTCCTG 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 2 2 3 195 2R 12982552 12984740 TTGTTGAGGGAATTGCATTGAG 59 12982378 12982397 AGTAGAAGAGCGTGTAGCTG 59 NA InUTR Drosophila melanogaster 61 CG8950 FBgn0034186 FBtr0087013 3 1 1 60 2R 12948299 12948373 AGGATCTTCAGGATCCTGC 58 12948257 12948275 TCTTTGACGGTCAGATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 Ugt37c1 FBgn0026754 FBtr0087076 1 1 1 60 2R 12731370 12731389 AATCCCAGTATCATGGTGTC 57 12731329 12731347 TTCAATGGATGGTCACCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5550 FBgn0034160 FBtr0087033 3 1 1 94 2R 12704641 12704661 ACCTTCGATAGGGATAACGAC 59 12704717 12704798 TTCAGATTGCTGCTAAGGC 58 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 1 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 CG15705 FBgn0034104 FBtr0087137 2 1 1 105 2R 12168711 12168731 AAAGTGTCACATTCAAGACGG 59 12168798 12169031 CTCTTCAGCTGCTCATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG15709 FBgn0034100 FBtr0087186 1 1 1 149 2R 12142418 12142733 AATATGGCTACAACCTCTCCA 58 12142289 12142307 CACTAATCTCCTCCAGCGG 59 NA Drosophila melanogaster 61 CG15701 FBgn0034095 FBtr0087131 3 1 1 151 2R 12120371 12120478 AAGGAAGTTCAGTACGCCT 58 12120593 12120611 TAGCTCCTCAGATCACAGC 58 NA Drosophila melanogaster 61 Asph FBgn0034075 FBtr0087220,FBtr0087219,FBtr0300575 3 3 3 81 2R 11999420 11999494 GACTGGAGGATCTGGACAC 59 11999539 11999557 TCATCTCGATGTTCGTCCA 58 NA Drosophila melanogaster 61 CG8388 FBgn0034062 FBtr0087263 3 1 1 100 2R 11898650 11898731 GGCTTCAGATCCCTGACTC 59 11898568 11898586 GGCTTGTTCCACATTGAGG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 3 9 13 82 2R 11836644 11836724 TCATTTGCTACGTGCTACTC 58 11836581 11836603 CGCTCTAGTTATATTCGAGAAGG 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 1 4 4 80 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747611 11747704 TGCTCTAGATCTAGGCCCA 59 NA Drosophila melanogaster 61 Ir52c FBgn0050468 FBtr0087329 3 1 1 60 2R 11392679 11392702 TACAGGAAAGGTCATATCGTAGTC 59 11392719 11392739 AAACAGATGTCGTTCATCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a9 FBgn0013771 FBtr0300128 1 1 1 80 2R 10767788 10767807 TTGGAAAGTACAACGGAGAG 57 10767674 10767747 GAAGGGTTTCCGATATAACCT 57 NA Drosophila melanogaster 61 CG33506 FBgn0053506 FBtr0091446 1 1 1 81 2R 10745451 10745471 TTTACACCATGGGTCACTACC 59 10745328 10745346 ATGCTGTAGAGCACAAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0289934 2 1 4 82 2R 10641389 10641472 GAAGAGACACATGACATCAATGAG 59 10641330 10641350 GATTGTGTTGGATCTCGTTGG 59 NA Drosophila melanogaster 61 CG30479 FBgn0050479 FBtr0087479 1 1 1 242 2R 10562433 10562451 ATGTCGGCATCAATATCGG 57 10562209 10562228 GTCAGAGAATAGTGCAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12863 FBgn0033948 FBtr0087500 3 1 1 116 2R 10508306 10508377 GCATATAGGAGCTAGCAAGGT 59 10508210 10508230 CCCAGATATTCGGCAAATCTC 59 NA Drosophila melanogaster 61 CG42287 FBgn0259183 FBtr0299667 2 1 1 87 2R 9978088 9978165 TATGCTGCTTCGAAGAGCA 59 9978213 9978234 CGGCCATTAGGAAATATAGGGA 59 NA Drosophila melanogaster 61 CG18568 FBgn0033888 FBtr0087608 3 1 1 60 2R 9859613 9859631 GTCTCAGCAGCTACTGGAG 59 9859571 9859592 CTTATGATCGAGGATCTCAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6704 FBgn0033887 FBtr0087609 1 1 1 80 2R 9857801 9857869 AAACGGATTAAATCCCTGGC 58 9857740 9857761 AAGAGTACATTGGACAAATGGG 58 NA Drosophila melanogaster 61 CG6220 FBgn0033865 FBtr0087650 1 1 1 127 2R 9580141 9580161 GCCTGAACAATATCAAGACAC 57 9579798 9580052 AAGCTCGTTCTGAAATCGA 57 NA Drosophila melanogaster 61 CG34236 FBgn0085265 FBtr0301011 2 1 1 80 2R 9492616 9492634 GAAACCTGTGAGTCCAGAG 57 9492481 9492572 CACTGTATCTTCGGGTGTC 57 NA Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 3 2 2 81 2R 9391977 9391996 CTTTACGCGTTACTCAGTGG 59 9392038 9392115 GTCTTCTTTAACCGTCGTCTG 59 NA Drosophila melanogaster 61 CG17059 FBgn0040754 FBtr0087739 3 1 1 90 2R 9107946 9108274 ATGGAAATGGACGAGTCCG 59 9108327 9108346 CATTGTAGAAGTCAGCGTGG 59 NA Drosophila melanogaster 61 CG13324 FBgn0033789 FBtr0087796 3 1 1 63 2R 8936958 8936976 AACGTGAACGTGAACTACC 58 8936913 8936931 AGTTGTCGTACACGATCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 2 3 3 101 2R 8822744 8822763 AATAGACAGTATCCGGGTGC 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 Aats-asp FBgn0002069 FBtr0087784 1 1 1 80 2R 8768768 8769019 AATTTGCGGGAAATATCCCT 57 8769059 8769080 AGGATTCAATCTTGCTAGACAC 58 NA Drosophila melanogaster 61 CG8831 FBgn0033737 FBtr0087952 2 1 1 61 2R 8316975 8317049 GAACTCTCAGCTGTCAAGC 58 8316932 8316951 CCGAATAAACTGTGAAGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG30048 FBgn0050048 FBtr0100374 2 1 2 134 2R 8283474 8283545 CATATCGTCGGTTTCGGTG 58 8283643 8283661 ATCACAGTGATTGCTTGCA 58 NA Drosophila melanogaster 61 CG30043 FBgn0050043 FBtr0087907 1 1 1 80 2R 8248210 8248289 TGGTAACATAGCTGGTTTGG 57 8248329 8248350 ACGTTCTCATAGGTATCAAAGG 57 NA Drosophila melanogaster 61 CG8407 FBgn0033687 FBtr0087985,FBtr0301127 3 2 2 103 2R 8041067 8041154 TTTATCCTCTGGTTAAGCACAC 58 8041218 8041413 GTGCTCGTAGTTCGATGAG 58 NA Drosophila melanogaster 61 Damm FBgn0033659 FBtr0088061 2 1 1 121 2R 7753094 7753112 CATACAAACCTTGTGCGAG 57 7752913 7753010 GAACTTGTTTCGAACCTGTC 57 NA Drosophila melanogaster 61 Mtor FBgn0013756 FBtr0088033 1 1 1 92 2R 7746908 7746926 GACTCTACCTCAGGCTGAG 58 7746982 7747056 ATCTCCACAGAGCTTTCGT 58 NA Drosophila melanogaster 61 TpnC47D FBgn0010423 FBtr0088184 1 1 1 80 2R 7162328 7162404 GATGAGGACAAATCCGGTC 58 7162266 7162285 CTCATCATCCTCCTCTACGA 57 NA Drosophila melanogaster 61 Cpr47Ec FBgn0033600 FBtr0088189 1 1 1 109 2R 7147199 7147344 ATGTGCAAGATCCTTCCTC 57 7147108 7147126 ATGATCTCGGACTTCAGGA 57 NA InUTR Drosophila melanogaster 61 CG13230 FBgn0040764 FBtr0088204 3 1 1 96 2R 7042552 7042653 GATAATCGACGCTTACAATCGG 59 7042710 7042728 GAATTGGGCCACAAAGGTG 59 NA Drosophila melanogaster 61 CG6751 FBgn0033562 FBtr0088228 3 1 1 60 2R 6764518 6764537 AAGGTGTGGAACTTTGATGG 58 6764560 6764578 CCATGTTGAACTCGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12895 FBgn0033523 FBtr0088314 2 1 1 121 2R 6324754 6324834 GCAATTTATAGTATCTACGGTAGGC 59 6324657 6324677 CATCGTAGTCCACAATTTCCC 59 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388,FBtr0088389 1 2 2 106 2R 5859934 5860009 CAACTTCAACAAGGGCGAG 59 5860077 5860097 GACTATCTCTGACGATCTGCT 58 NA Drosophila melanogaster 61 CG12133 FBgn0033469 FBtr0088386 1 1 1 80 2R 5855249 5855269 GCAGTACTACACGAGAAATGG 58 5855309 5855393 TGAAGAGTGTATTTCACCCGA 59 NA Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088494 2 1 2 66 2R 5700260 5700278 GTTAGCATTCAGAGGGCCA 59 5700153 5700233 GAAGTTCTTCAAGGAAGTTTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 CG8197 FBgn0033369 FBtr0088661 3 1 1 121 2R 4948865 4948957 CTCAGCTTGGAAGGAACAC 58 4948762 4948780 AAGTTGAACTGTGTCAGGC 58 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 1 1 1 62 2R 4788343 4788413 GAGACCAATGGCAAAGCTC 59 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 beta3GalTII FBgn0033315 FBtr0088728 1 1 1 60 2R 4514550 4514574 CCATGACACATACAAGAATCTTACC 60 4514514 4514533 GCGTCTCAGGATATACAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 3 4 4 80 2R 4367409 4367428 TGTTATTTGCACGGTCTACG 58 4366971 4367369 ATGGTGAATCCAATATGCTTCG 59 NA Drosophila melanogaster 61 CG30375 FBgn0050375 FBtr0088799 3 1 1 90 2R 4153754 4153829 TTAGACAGGCGGAGAACAG 59 4153682 4153700 AGAGTGTTCGACTTGGAGG 59 NA Nonspecific Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088866 3 1 2 121 2R 3928607 3928704 AGCTCGATAAATAAGCATCCAG 58 3928786 3928804 CCAGTGAGATGTCCGAGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Odc1 FBgn0013307 FBtr0088863 3 1 1 80 2R 3893414 3893494 GACGTAAAGTTTGAGAAGATAGCC 59 3893532 3893551 GATTATGTGAACGCGTTCGT 59 NA Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 3 2 2 120 2R 3850890 3850966 GGAATATAGACCACGCGGT 59 3851049 3851068 GTAGGGATCAATCGGAGGTC 59 NA Drosophila melanogaster 61 CG30382 FBgn0050382 FBtr0302223,FBtr0088894 1 2 2 119 2R 3718956 3719036 TCTACCAAGTGGAGTACGC 58 3718855 3718873 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 2 2 2 83 2R 3694699 3695088 CATCCCAGATACAAATGCTACTC 59 3695131 3695149 CTGAATCGCATTCTGGCAG 59 NA Drosophila melanogaster 61 cn FBgn0000337 FBtr0088931 3 1 1 96 2R 3670886 3670972 TATGTGGAGATGCGAGACC 59 3670808 3670826 GTCTTTCTACCTTCGGCGA 59 NA Drosophila melanogaster 61 CG17985 FBgn0033199 FBtr0088946 3 1 1 113 2R 3539850 3541994 CGAATGACGAAGCCAATATGG 59 3539757 3539775 CACTCAAAGAGGGTCCAGG 59 NA Drosophila melanogaster 61 CG2144 FBgn0033187 FBtr0088904 2 1 1 80 2R 3408122 3408200 ATCGGAGTGATTACTACACCT 58 3408241 3408260 CATCGCCTTCTCTTAAAGGG 58 NA Drosophila melanogaster 61 Ady43A FBgn0026602 FBtr0089050 3 1 1 222 2R 3132012 3132502 CTTCTGAGAGCTCTCGGTG 59 3131808 3131827 TCCTGATACATGAGGCACAC 59 NA DesignRelaxed Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 3 2 2 84 2R 3039480 3039498 TCATTAACGCAGTGGAGCA 59 3039348 3039435 CCTTTAAGCAATCCAGTTTCCA 59 NA Drosophila melanogaster 61 CheB42c FBgn0066292 FBtr0086191 3 1 1 81 2R 2832494 2832516 GGTTTAAGTACTGGACCAAACAC 59 2832365 2832454 ATTATAACGGTACCACGCGT 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 1 11 11 88 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17266 FBgn0033089 FBtr0086144 3 1 1 81 2R 2563157 2563177 ATACAGTCCCAACTGAGAAGC 59 2563030 2563114 TCATTCGTCCGATTTCCGT 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 1 4 4 82 2R 1925630 1925649 AGATGGGCTTCAAACTCTCC 59 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 1 1 1 75 2R 1541421 1541491 AAACCTGATGGTCTACCGC 59 1541530 1541548 AAGATACTTCCGTCCCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 3 2 5 114 2R 1492010 1492097 CAAAGTTTGAGTACGCATTCTG 58 1491861 1491879 TAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 TpnC4 FBgn0033027 FBtr0086075,FBtr0302019 1 2 2 87 2R 1394205 1394275 CAATTGAGAATCCTTAGGAACG 57 1394139 1394160 CAAGAATGCTAGATACATCAGC 57 NA Drosophila melanogaster 61 Cyp6a16Psi FBgn0031726 FBtr0100853 3 1 1 127 2L 5622711 5622730 GCTGCGTATGGAGATAAACG 59 5622029 5622621 TACTTGCGCAGAGTTTCCA 59 NA Drosophila melanogaster 61 Tsp39D FBgn0032943 FBtr0273404 1 1 1 112 2L 21356579 21356597 ATACTCACGCAACTCAGCA 59 21356672 21356748 AGTGAGCATCTGTATACCCG 59 NA Drosophila melanogaster 61 del FBgn0086251 FBtr0081502 3 1 1 69 2L 21148217 21148235 GTTGGAGAAAGCCCTACTG 57 21148102 21148121 ACCAAGAGCTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34136 FBgn0083972 FBtr0110944 2 1 1 81 2L 21097208 21097226 CTGTCGTTTCCCTACTGTG 58 21097270 21098594 AATTGTTGGTGCTCATTCAC 57 NA Drosophila melanogaster 61 Oseg5 FBgn0032891 FBtr0290042 2 1 1 86 2L 20833675 20833693 AGCATCTGGTATTGTCCCG 59 20833446 20833625 GCCAAATTCCGTCGTATCC 59 NA Drosophila melanogaster 61 Oseg5 FBgn0032891 FBtr0290042 1 1 1 86 2L 20833676 20833694 CAGCATCTGGTATTGTCCC 58 20833447 20833626 CCAAATTCCGTCGTATCCA 57 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 2 2 2 271 2L 20349194 20349212 AATACGCCCAGAAGAACGA 59 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10680 FBgn0032836 FBtr0081303 3 1 1 81 2L 19964943 19964961 GAGGCATTCGACCAATTCC 59 19965006 19965076 GATGGCATAGGTACCGGTC 59 NA Drosophila melanogaster 61 CG34051 FBgn0054051 FBtr0100106 2 1 1 84 2L 19960771 19960862 GCACAAACACTTTAACCGAG 58 19960706 19960727 TCCTGATCTGTGTTTGAAAGTC 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301718,FBtr0301719 2 3 4 80 2L 19926505 19928635 AGCATAAGATCGACGAAATCC 58 19928676 19928695 GTAGTAGGGCTCGATTTCCA 59 NA Drosophila melanogaster 61 CG16771 FBgn0032779 FBtr0081204 2 1 1 60 2L 19428566 19428585 CCGTTGAGTCTACACTTTCC 58 19428608 19428626 ATGACCAAGGTTTCGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31798 FBgn0051798 FBtr0081200 2 1 1 80 2L 19395003 19395083 CTAATAGCCGAAATTGGCAGG 59 19395123 19395143 CTCCATTAGAAAGTAGGCACG 58 NA Drosophila melanogaster 61 dnt FBgn0024245 FBtr0081224 2 1 1 80 2L 19339817 19339836 CCATGGCATTGGATCATCTG 59 19339638 19339774 GCTGATCGTCAATAACGCA 58 NA Drosophila melanogaster 61 CG5783 FBgn0032670 FBtr0081049 3 1 1 80 2L 18156498 18156517 AATCTGGTGTACAGGGACTG 59 18156558 18156634 AGATGGAGGTTCGACTTTCAG 60 NA Drosophila melanogaster 61 CG5693 FBgn0040989 FBtr0081026 1 1 1 140 2L 18006798 18006816 AATCCGGGCTACATTGGAC 59 18006920 18006938 GTCCTTGTTGGATTGTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021,FBtr0081022 3 2 3 113 2L 17969450 17969468 ATGAATCCCGAGTACAGGC 59 17971898 17971916 CCGCATGATGAACTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 3 1 1 112 2L 17590701 17590719 GATTCCCTATGCCCATTCG 58 17590795 17590873 GTCTTCTCAACTCCTCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18563 FBgn0032639 FBtr0300902 3 1 1 146 2L 17457936 17457954 TGTCCCTATGGAGAAGTGC 58 17457684 17457766 GTAGAAGATGATGCAGACTCAG 58 NA Drosophila melanogaster 61 CG31743 FBgn0032618 FBtr0080947 3 1 1 80 2L 16885726 16885805 AACGTAGTGGGCAAATACGA 59 16885846 16885866 GAATGTTAGATTGTCGGCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG31743 FBgn0032618 FBtr0080947 2 1 1 60 2L 16885685 16885703 AGGTTATAGCCAAGCTGTG 57 16885727 16885805 TCGTATTTGCCCACTACGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31809 FBgn0051809 FBtr0113414 2 1 1 60 2L 16853986 16854004 TACACTGGGAAAGACGAGC 59 16853854 16853962 GAGGGCGTACTGTAATCCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4935 FBgn0028897 FBtr0080825 1 1 1 89 2L 16263100 16263118 AAATAGTCACGGGCTCCAG 59 16263168 16263270 CATTATCACTTATGCGAATGCG 58 NA Drosophila melanogaster 61 CG10839 FBgn0028858 FBtr0080800 1 1 1 60 2L 15979782 15979800 AACCTGAAAGTCCTGAGCC 59 15979824 15979842 GTGGTTCTATGCCGTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or35a FBgn0028946 FBtr0080781 3 1 1 80 2L 15622420 15622491 GGCCTTTACTACGGATTCC 57 15622358 15622378 CTGGGATTTGTAGAGTACTGC 58 NA Drosophila melanogaster 61 Or35a FBgn0028946 FBtr0080781 2 1 1 80 2L 15622419 15622490 GCCTTTACTACGGATTCCC 57 15622357 15622377 GCTGGGATTTGTAGAGTACTG 58 NA Drosophila melanogaster 61 CG15255 FBgn0028950 FBtr0080785 2 1 1 60 2L 15611057 15611076 GAAGTTGGTTACGACTACGA 57 15611016 15611034 CGTTGATAGAGAAGGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089699,FBtr0089700 3 2 2 60 2L 15485206 15485225 TCAATGATCGAGGGCTTAGG 59 15485248 15485266 GATTTCGGAACTGTTCCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ms(2)35Ci FBgn0011239 FBtr0080731 2 1 1 95 2L 15292664 15292741 CGTTAGAATTGTCACAATGCC 58 15292798 15292816 ATTGTAAGACCTGCGTACG 57 NA InUTR Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 3 5 9 93 2L 15263392 15263411 TTTCCCTAGAGACACTGACC 58 15263115 15263337 ATGCTCTCGGACATCTTCTC 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 2 5 9 93 2L 15263392 15263412 ATTTCCCTAGAGACACTGACC 59 15263116 15263337 TGCTCTCGGACATCTTCTC 58 NA Drosophila melanogaster 61 CG15283 FBgn0028844 FBtr0300837 3 1 1 60 2L 14450837 14450857 ATTAGATCCTGTCGAGCTCTG 59 14450797 14450817 CAAGAGAACATCGTCTTAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)34Fc FBgn0261534 FBtr0080640 1 1 1 208 2L 14349758 14349776 TCCGTTTGTTGGTTCTTGC 59 14349499 14349517 GAAGCCAAGGAACTCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 mTTF FBgn0028530 FBtr0080641 3 1 1 92 2L 14347585 14347660 TTACCAAGATCAAAGAGGTGC 58 14347513 14347532 TGTGGCATAGAATTCGAGGA 58 NA Drosophila melanogaster 61 nimA FBgn0261514 FBtr0299659 2 1 1 80 2L 13961888 13961906 AAACTTCCACGAACCACTG 58 13961949 13962135 TATAGCTCTGGTTGTGCCTC 59 NA Drosophila melanogaster 61 CG16884 FBgn0028544 FBtr0080557 1 1 1 92 2L 13946038 13947096 AAGTATTCATCTGCTTAGCCG 58 13945966 13945984 TGTCCAGCTTCTTCTCCAG 59 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575,FBtr0080574 1 2 2 60 2L 13783187 13783210 CAGGAAGCTATTTAAGGAGTACTG 58 13783150 13783170 TATCTTGTTCTCCTTGTAGCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517 3 1 2 83 2L 13449353 13449437 GCAACGTGAGTATCAAGGA 57 13449288 13449306 ATGTCATTGGCAAAGGTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16825 FBgn0032503 FBtr0080463 3 1 1 60 2L 13307517 13307535 GGACCATGTACAACTCCCA 59 13307559 13307577 TGAGCTACGTAACCAGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 2 2 8 90 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458198 12458217 ATCATGAGATGCGACTTGAC 58 NA Drosophila melanogaster 61 CG14947 FBgn0032406 FBtr0080297 2 1 1 60 2L 12077550 12077569 CGGATACACTATGGCATGGA 59 12077588 12077610 CGAAGTTCTGACTTCTTATCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 3 2 2 81 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053024 12053044 AGTTGACCAGAACATAGATGC 58 NA Drosophila melanogaster 61 Sfp33A1 FBgn0259962 FBtr0300306 1 1 1 149 2L 11754336 11754414 CATAATAGCCGAGTTGTGCT 58 11754206 11754225 TCGCACATGTCTATTGTGTC 58 NA Drosophila melanogaster 61 mre11 FBgn0020270 FBtr0080213 3 1 1 80 2L 11283467 11283486 TAAGGTGGTTAAGCGTACCA 58 11283529 11283606 GCATTATCCGCTTCCAGTG 59 NA Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080156 1 1 2 183 2L 11011367 11011477 CAGAATTCTGCAACTGCCA 58 11011624 11011642 CTTGCAGATCGGTCTTGAC 58 NA InUTR Drosophila melanogaster 61 CG17768 FBgn0032240 FBtr0100253 3 1 1 80 2L 10403552 10403745 TATTTGCACCTCAAAGGATGG 58 10403492 10403511 CGCAGATATTTGATGGTGCT 58 NA Nonspecific Drosophila melanogaster 61 dpr19 FBgn0032233 FBtr0080004 1 1 1 91 2L 10377866 10377886 ACAACACTCGAGTTATTGCAC 59 10377939 10378025 ACGTATCCAGGAAACCGTG 59 NA Drosophila melanogaster 61 CG4804 FBgn0032178 FBtr0079938 1 1 1 80 2L 10063644 10063722 GAATGCCACAGAATATAAGCC 57 10063763 10063782 AAGAAGAATGGATGGTCAGC 58 NA Drosophila melanogaster 61 CG13126 FBgn0032168 FBtr0079892 1 1 1 90 2L 9952819 9952837 TCAAAGCATGCCATCTGTC 58 9952688 9952765 AATAGGCAGACTTTCCGTG 57 NA Drosophila melanogaster 61 CG4592 FBgn0032162 FBtr0079879 2 1 1 91 2L 9922128 9922148 GACTGCGATTATTCTGGACTC 58 9922201 9922274 TGAGTGTCCATTGATTGCC 58 NA Drosophila melanogaster 61 Srp54 FBgn0024285 FBtr0079875 2 1 1 60 2L 9914490 9914509 CACTGAGGTTAAGAGCTCAC 58 9914532 9914550 GACACTAACCGATTTGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31710 FBgn0051710 FBtr0079849 3 1 1 60 2L 9703277 9703297 GAATCAGTGCAATGAACAGCA 59 9703148 9703166 GGACTGGGCTTTATCTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr30B FBgn0032125 FBtr0079831 2 1 1 188 2L 9542958 9543049 AGTTACCTATTTGTTGTGCCTG 59 9543198 9543216 TCGATCAGCTCGTAGACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3769 FBgn0032119 FBtr0079810 3 1 1 77 2L 9435662 9435680 CACAACGACTCCCAAAGAG 58 9435831 9435850 AACTTATTAATGGCCGTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG31897 FBgn0051897 FBtr0079673 1 1 1 60 2L 8445312 8445331 ACAGGACAAGACTCCTACAG 58 8445351 8445372 CTCCATTCGTTTCTTATACCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14274 FBgn0032023 FBtr0079604 2 1 1 80 2L 8340242 8340263 TCTCATATTTCGATAATGGCGC 59 8340302 8340875 TCCTTGTATCAGGGTCTTTGG 60 NA Drosophila melanogaster 61 CG8683 FBgn0031985 FBtr0301229 3 1 1 81 2L 8120746 8120764 TGGAAGCCATTACCTACCT 57 8120573 8120703 GTTTGTAGTTCCATGTTCTCC 57 NA Drosophila melanogaster 61 Wwox FBgn0031972 FBtr0079550 2 1 1 99 2L 8003460 8003542 AATTAAGCAGAGTGTTAGCCAC 59 8003382 8003400 GAATGTGGTCTCCAGACCA 59 NA Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0100151 1 1 2 120 2L 7999111 7999129 AAATGCAATCCGTGACCAG 58 7999213 7999231 AAAGAACGTTAGCATCGCC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Wnt4 FBgn0010453 FBtr0089291 1 1 1 89 2L 7257254 7275371 AGGCCTTTACAACGAACAC 58 7257183 7257201 ATGTATCTGCAGGGTCCAC 59 NA Drosophila melanogaster 61 CG10158 FBgn0031871 FBtr0079366 3 1 1 160 2L 6945161 6945179 GAAGCTGTTACGCTAGGGA 59 6944955 6944975 CTGCGCATCCATTATAATCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 1 2 2 81 2L 6862437 6862456 GTGGCTACCTAATATCGCTG 58 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 TTLL3B FBgn0031853 FBtr0300056 1 1 1 83 2L 6734567 6734658 AGAAGTACATAGAGCGACCC 59 6734704 6734722 TAGTGTCCGTGATGGTCAG 59 NA Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 2 3 3 102 2L 6616059 6616077 CAAAGACGATAAGCGAGCC 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 epsilonCOP FBgn0027496 FBtr0079261 3 1 1 60 2L 6489201 6489219 AGCAGAATGAGGAGGACAC 59 6489243 6489261 CCGATGTAGTACTCGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8965 FBgn0031745 FBtr0079158 3 1 1 92 2L 5861169 5861259 CTAAGACGCCTCAAGATGC 58 5861095 5861114 CAAGATGGTCTTCACTCCAG 58 NA Drosophila melanogaster 61 tomb FBgn0031715 FBtr0079127 2 1 1 60 2L 5536605 5536623 GCATCAAGAACTACTGCGA 58 5536563 5536581 CATCGACAGAACTTGGTGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0079012,FBtr0079015,FBtr0302569,FBtr0100260,FBtr0079014,FBtr0100259,FBtr0079013 1 8 8 189 2L 5068050 5068068 CAGGTACTCGGACATGGTG 59 5068221 5068307 CAAATCCAGTGCCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 2 2 2 80 2L 4935314 4935333 GCTTTGGATTTCTGACTGTG 57 4935176 4935274 GAAGTATATCCTGGAACACCTG 58 NA Drosophila melanogaster 61 CG15443 FBgn0031609 FBtr0077450 1 1 1 88 2L 4462685 4462703 GTTCCTCCAGAGCAATGAC 58 4462555 4462633 TGTGAGGTCCAGTTAGCTC 58 NA Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301,FBtr0077508 3 2 2 81 2L 3919787 3929320 GCTGAATGTCAACTACTATCCC 58 3919727 3919745 CAGTTTCGCCACATGATCC 59 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 3 1 1 115 2L 3388408 3388428 AGTACTCCTGCTGAATAAGAC 57 3388251 3388332 TATTTAACTCCGCAGACAGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 3 2 2 198 2L 3040551 3040569 GAACAAGATGCGCTGTCAG 59 3040729 3040800 AGGAGCAAGACAGTATGAAGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 3 7 7 80 2L 2963120 2963232 GCAATCTGTTAAGGTGATTCG 57 2963273 2963292 TCTTCGTAATTCGTCATGGT 57 NA Drosophila melanogaster 61 Pgk FBgn0250906 FBtr0077739 3 1 1 131 2L 2748356 2748375 TTCAATAAGCTGAGCATCGA 57 2748180 2748198 GATACTATCCAAGGCAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077772,FBtr0077775,FBtr0077771,FBtr0077773 2 5 5 286 2L 2455836 2455854 CTCTACGCCGAGATCATGG 59 2457827 2457845 TAGACAAGCACCTGGTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3609 FBgn0031418 FBtr0077791 3 1 1 111 2L 2372914 2372932 CACCTTGACCTACAGTGGT 59 2372762 2372841 GTCAATCAGGGTAACTTGTCC 58 NA Drosophila melanogaster 61 CG17237 FBgn0031410 FBtr0077801 2 1 1 60 2L 2288674 2288692 TAGGATCAACAAAGACGGC 57 2288632 2288655 CCCATAGATAATGTCTTGAACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 3 1 1 66 2L 2240266 2240356 GAAACTGTACGCACTGCTG 59 2240218 2240237 GGTATCCACGTCGAATTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10880 FBgn0031398 FBtr0077843 1 1 1 86 2L 2215559 2215577 GAAGCTAATGCCCAGAACG 59 2215436 2215454 AATAGTAGCCAGGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11723 FBgn0031391 FBtr0077852 2 1 1 85 2L 2146804 2146894 AGCAGGATGTCTCGATCTG 59 2146737 2146756 TCGTTTCTGCTGTATCTTGC 58 NA Drosophila melanogaster 61 CG31661 FBgn0051661 FBtr0077932 1 1 1 60 2L 1497489 1497511 CCCTGATAAATTCCTACGATACC 58 1497530 1497549 AATGATTGATCTCCGACCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33922 FBgn0053922 FBtr0091926 1 1 1 133 2L 1343753 1343771 TAACCGTAGATGGCTGCAG 59 1343578 1343661 CTTATCCAGAATGATATCGTGGTC 59 NA Drosophila melanogaster 61 CG5126 FBgn0031320 FBtr0077978 1 1 1 101 2L 1183603 1183621 ATGAGAATGTGCTTCGGAC 57 1183463 1183538 TCCCTAAACCTTCAACGTG 57 NA Drosophila melanogaster 61 CG6961 FBgn0030959 FBtr0074660 3 1 1 105 X 18681944 18682025 CGACAGAAAGTTCAATGCGA 59 18681858 18681876 CTTTGCCGGCATATCAGAG 58 NA DesignRelaxed Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471,FBtr0301466,FBtr0301468 3 7 7 104 3R 21570600 21570715 CAGCAATGCATATGCTCCA 58 21570514 21570532 GAGAACAGTGGCCATTCAC 58 NA Drosophila melanogaster 61 CG5862 FBgn0038868 FBtr0084049 3 1 1 103 3R 17040883 17040903 TGGATCTGATCATTCTCGTGG 59 17040968 17041044 AGCTACCTTGGTTTCTGGG 59 NA Drosophila melanogaster 61 ND23 FBgn0017567 FBtr0083191 2 1 1 102 3R 11662001 11662087 GATTCTGTCAGGAAGCCTG 57 11661917 11661936 AGCTTCTCCTTGTTGTACAG 57 NA Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 1 2 2 80 3R 10496132 10496233 ATAATCAATGCGCTCTATGTCC 58 10496073 10496092 GATTTCGTTGCTCTCGTTCC 59 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373,FBtr0082887,FBtr0273374,FBtr0082886,FBtr0082885 2 5 5 98 3R 9906623 9906731 CACAATGCAAGAGATGGTCTC 59 9906791 9906809 GTACGTGTTCAGGGAGTCC 59 NA Drosophila melanogaster 61 CG17032 FBgn0036547 FBtr0075511 1 1 1 83 3L 15952474 15952797 GATGATTTGCCTTCCAAGGG 59 15952843 15952861 CTGCGGATTAGACTTCGGT 59 NA Drosophila melanogaster 61 CG7276 FBgn0036499 FBtr0075546 3 1 1 60 3L 15491556 15491576 TACATTCGCTTGATGATAGCC 58 15491595 15491616 GATTATAGGTCTTGTTTGCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6527 FBgn0036085 FBtr0076291 3 1 1 83 3L 10551831 10551913 CCTACAAGGTGCAATGTACAG 59 10551768 10551786 CATGTGAGTGCTCATTGGG 58 NA Drosophila melanogaster 61 Cyp6a20 FBgn0033980 FBtr0300127 1 1 1 80 2R 10770714 10770862 TCATTGATGAGACCATGAGGA 58 10770904 10770922 GATTGGTGTGCTGGTAGTG 58 NA Drosophila melanogaster 61 CG6280 FBgn0033866 FBtr0087628 3 1 1 108 2R 9643064 9643138 CGGCAAGGAGCTTAATAAGC 59 9643209 9643227 GAGTTCCCTCTCCAGATCC 58 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088416,FBtr0088419,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 10 10 83 2R 5991902 5992227 AGCAGTCAGAACGTTACGA 59 5992271 5992292 TTCTTTCCTCATTTGAGAGCTC 58 NA Drosophila melanogaster 61 CG42382 FBgn0259728 FBtr0299994 1 1 1 138 2R 5054914 5054932 TCCGATGAAGACAGCAGTG 59 5054736 5054754 CATCTCCCTTTCCAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14757 FBgn0033274 FBtr0088805 3 1 1 81 2R 4060865 4060994 CCAACTACGGTTGACAATGG 59 4060803 4060822 AGGAGAGTCCTTCATGTTGG 59 NA Drosophila melanogaster 61 CG1850 FBgn0033154 FBtr0089022 2 1 1 60 2R 3147543 3147562 AACCTATCCAGGAAACTCCA 58 3147502 3147521 TTGAACTGCTTCAGATGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 3 2 2 61 2L 22690631 22690649 ATCTTGTGCTATCAGCACG 58 22690588 22690606 CAAGAACTCCCAATGCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 2 2 2 93 2L 5331187 5331271 TGTATCCAGATAACAAGCTGCT 59 5331115 5331133 ACCAGGATGGAATTGGAGC 59 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 2 2 2 81 2L 4399592 4399670 GGAGAACAAGGTTAACGCG 59 4399714 4399733 TTAGAAGGGCGAATTCATGC 58 NA Drosophila melanogaster 61 Ts FBgn0024920 FBtr0077679 3 1 1 60 2L 2968689 2968709 ATCATTAAACGTCAGGTGCAG 59 2968649 2968668 CGACTATCTGAAAGTCCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 2 7 7 80 2L 2963121 2963234 CAATCTGTTAAGGTGATTCGTG 57 2963273 2963293 CTCTTCGTAATTCGTCATGGT 58 NA Drosophila melanogaster 61 CG13690 FBgn0031252 FBtr0078090 2 1 1 60 2L 419082 419100 CATGGGCCTTATCCAACAG 58 419040 419058 ATCCACATAAACCTCGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 3 5 5 81 2L 13634166 13634247 GTGTTCACCTACAGAGATTTCAC 59 13634288 13634306 AAATTCCACCAGAGGCTCC 59 NA Drosophila melanogaster 61 CG13001 FBgn0030806 FBtr0074417 2 1 1 67 X 16836289 16836307 GGTGTACGAGGAGTACCTG 58 16836240 16836258 TTAGTCCGAGATAGTCGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12643 FBgn0040942 FBtr0071481 1 1 1 60 X 10159009 10159027 GCCGAATCCATTCGATTCC 59 10158967 10158985 CCCTATGTTGACCTGGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tst FBgn0039117 FBtr0084462 3 1 1 81 3R 19594954 19595039 AGAAATAAGCCCTTTGCTGAG 58 19594893 19594911 CATTCAGCTGCTGAATGCA 59 NA Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0089836,FBtr0299877 2 2 2 66 3L 22858910 22858982 TCACAGAACTATGAGGTCCC 58 22859011 22859029 GTTTCTCGTTGAAACGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11367 FBgn0037185 FBtr0078528 2 1 1 80 3L 22725773 22725791 AAGGTCCATGCATGAAGTG 58 22725834 22726030 CCGCAAATTACCTCAAACAG 57 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075796,FBtr0075794,FBtr0075793,FBtr0075795 2 4 4 84 3L 13902061 13902143 GCCTAAAGAAAGGATGGAAGTC 59 13901998 13902016 CAACACTTCTCGCAGAGTC 58 NA Drosophila melanogaster 61 CG10589 FBgn0037035 FBtr0078266 2 1 1 60 3L 20921120 20921140 CACGTAAATGTGGCTGTACTC 59 20921158 20921180 GACAGTTCAGTTTCTTGAGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5860 FBgn0038506 FBtr0083438 3 1 1 60 3R 13235694 13235715 TGATGGAAGAAACTTCACACTG 59 13235734 13235754 CTTCGATAGATAGCCAACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30059 FBgn0260475 FBtr0087715 3 1 1 287 2R 9301555 9301574 TAACTTCTACGGCCTTCACG 59 9301230 9301305 AACCAGTGCTTATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 dnk FBgn0022338 FBtr0083707 2 1 1 196 3R 14807788 14807806 AAGAGTCCATTCACGTGCA 59 14807966 14808041 GAGGACTAGGACCTTGCAC 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 2 4 4 161 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444960 11445071 TTCAATCCATCTTCTATGCGC 58 NA Drosophila melanogaster 61 CG17163 FBgn0039942 FBtr0113727 2 1 1 81 XHet 60673 60748 CCCATACAACCTAAGCAGGA 59 60611 60629 CGTCAAAGGCCTTAATGGG 58 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074777,FBtr0301308,FBtr0074776,FBtr0301307 3 5 5 81 X 19457156 19457177 CATCTCCAAGTACCAAATGCTC 59 19457034 19457116 TTCCTTCCAAATCTTGCACAG 59 NA Drosophila melanogaster 61 CG32541 FBgn0052541 FBtr0074650 3 1 1 103 X 18905710 18905796 AACAGCAGGTTAAGTGGTC 57 18905863 18905881 ATAGTCCAGCGATGAAGTG 57 NA Nonspecific Drosophila melanogaster 61 CG34328 FBgn0085357 FBtr0112530 2 1 1 60 X 18293792 18293810 CAGACGCAATCCCTTTCAC 59 18293750 18293771 AGTCTCGATATCCTCATATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6308 FBgn0030645 FBtr0074036 2 1 1 62 X 15366373 15366391 CAGACATCGAACAGACGGA 59 15366417 15366435 TAGAGTCACTGTTGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9101 FBgn0030622 FBtr0074024 2 1 1 60 X 15123372 15123482 CGATATCCAACGAATGCCA 58 15123330 15123348 CTGCTGAATCAGTCGATCG 58 NA DesignRelaxed Drosophila melanogaster 61 drd FBgn0260006 FBtr0100009 3 1 1 80 X 15020379 15020397 ACACGATACACCAGATGGA 58 15020438 15025620 CAATGTTGTACAAATAGGCCCT 59 NA Drosophila melanogaster 61 Ste:CG33238 FBgn0053238 FBtr0300087 1 1 1 110 X 13952401 13952419 TCTGATACACAGCTGGACG 59 13952249 13952327 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535,FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 8 8 82 X 13663083 13663187 TCGTATCGTAGACGTAATTGAC 58 13663230 13663248 CAAAGTGCTTGGGATCCTC 58 NA Drosophila melanogaster 61 CG15744 FBgn0030466 FBtr0073756 1 1 1 80 X 13182645 13182731 AGTATTGTCAGCATCAATGCC 59 13182770 13182791 CTTGAGTTCCGTAAAGTTTCGA 59 NA Drosophila melanogaster 61 CG34450 FBgn0085479 FBtr0112756 3 1 1 62 X 9223666 9223684 ATTGCAGGAGAGGATGTCC 59 9223622 9223640 AACATCCAGCTCTGCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12106 FBgn0030100 FBtr0071306 3 1 1 67 X 9088208 9088226 ATTCCTTGAAACTGACGCT 57 9088321 9088339 GTTCTTGGCATACAGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Traf6 FBgn0026318 FBtr0071188 2 1 1 60 X 8050228 8050248 TGCCAACAATCAAGTGTACTC 58 8050188 8050206 ACAGAACTTGTAGCCATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12730 FBgn0029771 FBtr0070780 2 1 1 64 X 5411487 5411505 AAATACCTGCTCAGCATGC 58 5411605 5411624 ATTCCAACAAAGCTGCACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6789 FBgn0029745 FBtr0070741 2 1 1 60 X 5026480 5026498 ACTTGGCTACCAGCTAACC 59 5026522 5026540 GTTCTTCCATCGCATCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 2 4 4 153 X 4598142 4598235 CAACAACTACGGAATGGGC 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 CG6133 FBgn0026079 FBtr0070669 3 1 1 79 X 4005702 4005722 GACTCACGAACTGAAGAAGGA 59 4005585 4005605 GGTCCACGTACTTAAGTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 VhaAC39 FBgn0028665 FBtr0070611 1 1 1 136 X 3775139 3775495 ACCTTGGAGGATCTCAAGC 59 3775595 3775613 CTCATGTGCTGGAACTCGA 59 NA Drosophila melanogaster 61 Nmd3 FBgn0023542 FBtr0070425 1 1 1 102 X 2077718 2077736 CATTGGTTCTGGTCAACCG 59 2077574 2077654 AAGGGAGCTCTGAAATAGACC 59 NA Drosophila melanogaster 61 elav FBgn0260400 FBtr0070091 1 1 3 175 X 415558 415579 GAGAACTTAGCAATTAGTTCGC 57 413207 413225 CACTCTGCATTAGCTGTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42619 FBgn0261334 FBtr0302236 3 1 1 96 U 3776163 3776181 GAGTTCGCAACACTTAGGA 57 3776031 3776104 TACCCTATTACATGTGCCCA 58 NA Drosophila melanogaster 61 CG42622 FBgn0261337 FBtr0302252 2 1 1 60 U 549179 549199 GGCATTAAGAGAAATGAAGCG 58 549220 549239 CTCATAGATTCCATCACGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9f3Psi FBgn0038034 FBtr0082602 1 1 1 153 3R 8224465 8224483 CTCTACTTGGGCAACATGG 58 8223514 8223532 TGATAAGATCTGGGTCGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CR31044 FBgn0051044 FBtr0085391 3 1 1 60 3R 25042945 25042966 GGTGGTTCATGATTAAGTTCGT 59 25042984 25043005 GTGCTGACCCAACTTAATAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 2 2 2 82 3R 27166295 27177001 GAGATCAAGGATGATTTGCCC 59 27177045 27177063 CCGAAGTATGAGGTCTCGA 58 NA Drosophila melanogaster 61 AdoR FBgn0039747 FBtr0085581 2 1 1 85 3R 25962846 25962864 ACCATTATCACTCCGGCTC 59 25962687 25962798 GTAACAATCTGACGGACCTG 58 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 3 4 5 82 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653706 25653804 GTGTTCGTTTGTAAACGTGG 58 NA Drosophila melanogaster 61 CG11874 FBgn0039634 FBtr0085416 2 1 1 80 3R 24936590 24936669 CATTTATGAACAGGTTGCTCAC 58 24936531 24936550 ATGAATATGGGCACCAAACC 58 NA Drosophila melanogaster 61 CG13972 FBgn0039522 FBtr0085212 2 1 1 60 3R 23342389 23342407 GATGGCAAACCTTGAGGTG 59 23342347 23342365 TTCCAGACCCTTATCCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085055,FBtr0085056 1 2 2 97 3R 22450526 22450544 ATTGGGAGGATCCTCTCAG 57 22450447 22450465 CAGGGATCTGAGCATTAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10420 FBgn0039296 FBtr0084870 3 1 1 131 3R 21061086 21061104 GTAGTCATCCTTCTGGGCA 58 21060910 21060991 AATAGCTTGACCTTCCGCA 59 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0301165 3 1 3 187 3R 19812925 19813003 AGTAGCAGACGATTAGAGGA 57 19813153 19813171 TGTTGTAGTGGGAGTTGGA 58 NA InUTR Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 3 3 3 119 3R 19633220 19633303 ATTCACAATCTCACCAGCG 58 19633119 19633138 GATCTTGAAGAGCTTTCGCT 58 NA Drosophila melanogaster 61 CG6985 FBgn0039017 FBtr0084308 1 1 1 87 3R 18568469 18568550 CATCTAATAATCTAGCGGACTGG 58 18568652 18568673 TCCAGACTATCCGATATAGCAG 58 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 1 3 3 70 3R 18288993 18289067 AAGTCGTATTTGTCGGGCA 59 18289101 18289119 CCCTTAGACTCCATCACGA 58 NA DesignNoJunction Drosophila melanogaster 61 sar1 FBgn0038947 FBtr0084209,FBtr0084210,FBtr0084206,FBtr0084207,FBtr0084208 3 5 5 104 3R 18184200 18184289 CACACTGCATCCAACATCC 59 18185253 18185271 AAGTAGTCCTTCCAGACGC 59 NA Nonspecific Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 1 5 5 86 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894893 17894911 TAATCTTGCAGCCGGTCTC 59 NA Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0110823 3 1 2 91 3R 16646431 16646451 CTACTTCAAGATGCACGACTC 58 16645205 16646378 CACTATCCTTGACGTGCCA 59 NA Drosophila melanogaster 61 CG11391 FBgn0038732 FBtr0083789 3 1 1 80 3R 15605144 15605341 CGAAATGCACAGCTATCTGG 59 15605382 15605402 AGGGTAATGAGTCCTGTTAGC 59 NA Drosophila melanogaster 61 CG14290 FBgn0038662 FBtr0083723 3 1 1 95 3R 14753839 14753926 ACTTTATGAGTACCCACTTCTG 57 14753765 14753784 CGGAGATGAATTTGGGACTC 58 NA Drosophila melanogaster 61 CG7357 FBgn0038551 FBtr0083524 3 1 1 80 3R 13633695 13633770 CGGATGTCCATATCTGCCT 59 13633633 13633653 GATACTTTGTGGAGTAGTGCC 58 NA Drosophila melanogaster 61 sds22 FBgn0028992 FBtr0083436 2 1 1 225 3R 13217389 13217410 AGGAGTATACAGTCATCTTGGA 57 13217669 13217687 CTTCTGGTTCGTTCATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 2 4 4 80 3R 12474342 12474428 GGTAGACATTAAACGCTATGC 57 12474470 12474488 ATCACGCCCTTAAGAACAC 57 NA Drosophila melanogaster 61 Mat89Bb FBgn0020407 FBtr0083259 3 1 1 104 3R 12091634 12091718 CAATGGAGCAAGACTAAAGCT 58 12091784 12091802 TTATGGTGCATTGTGGTGG 58 NA Drosophila melanogaster 61 CG14368 FBgn0038162 FBtr0082859 1 1 1 62 3R 9451180 9451198 AGTCTTGTGTCTAGGCGAC 59 9451136 9451154 ATCCACATCCACATCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Bbb FBgn0051354 FBtr0082636 1 1 1 92 3R 8329026 8329044 AATCTCAAGGATGAGCGCA 59 8329100 8329118 GAACAGAGATCCCTCGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113220,FBtr0113218,FBtr0113219 1 3 3 86 3R 7032969 7033091 TATCACAAACTCTCGGGCA 58 7033141 7033159 CAATCAGGTACTTGCGGTG 58 NA Drosophila melanogaster 61 CG4706 FBgn0037862 FBtr0082336 2 1 1 60 3R 6964338 6964359 CAAGGATGTAAAGATGGGAGAG 58 6964378 6964398 GGTGAAGTTGCGATTATACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG8043 FBgn0037610 FBtr0081902 2 1 1 102 3R 4502677 4502695 AATCAGTTCCTTGCTCGAC 57 4502760 4502844 TCTATTCATGCTTGTGCTGG 58 NA InUTR Drosophila melanogaster 61 CG18746 FBgn0042103 FBtr0081775 1 1 1 80 3R 3615501 3615520 ATCATTCAACGGACATGTGG 58 3615377 3615460 TCAATAAGCACCTCTATGCTG 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081652,FBtr0081646,FBtr0081651,FBtr0081647,FBtr0081654,FBtr0081655 1 7 11 118 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734452 2734604 CTGATGGACCTCTGTCACG 59 NA Drosophila melanogaster 61 Ccp84Ac FBgn0004781 FBtr0081693 2 1 1 127 3R 2521817 2521900 CTTTCAAGCTCGTTGCTCTG 59 2521709 2521728 TTGGTAGATCACATGCTGGG 59 NA Drosophila melanogaster 61 CG11373 FBgn0040679 FBtr0078657 1 1 1 93 3R 1786578 1786596 ATCCTCATCCAATCCCACC 58 1786219 1786523 CTTCCAAATCCTATCGTGTGC 59 NA Drosophila melanogaster 61 CG31546 FBgn0051546 FBtr0078737 3 1 1 62 3R 1460885 1460903 TATCTGACCAAGTTGCTGC 57 1460841 1460859 GGACACGTTGACAATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 3 2 2 81 3R 190216 190296 CGTTATATCATGCTTTGAGTCC 57 190337 190356 CAGCTCCGTATTGAAATGGA 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2566 FBgn0086661 FBtr0091666 3 1 1 61 3L 18889474 18889494 GTGATAGAGCAATAAATGCGG 57 18889433 18889451 ACTAGAACAGTGGCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 1 5 5 84 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776574 22776593 GTGCTCGTTCATTTGATCCA 59 NA Drosophila melanogaster 61 olf413 FBgn0037153 FBtr0301492 3 1 1 82 3L 22222199 22222217 AGGGCATCAACATATTCGC 58 22222263 22222374 CTCGGTTTGTCGTATCTGG 58 NA Drosophila melanogaster 61 CG7519 FBgn0037087 FBtr0078353 2 1 1 125 3L 21486447 21486531 CACTTTAATCTCATCACCAGC 57 21486618 21486636 AATATCATCGGTAAGCCGG 57 NA Drosophila melanogaster 61 gig FBgn0005198 FBtr0074819 3 1 1 95 3L 20131160 20131240 ATACTGCAGGTTACGTTCCA 59 20131298 20131316 GTCATTGCCAATGTGGCTC 59 NA Drosophila melanogaster 61 tey FBgn0036899 FBtr0074960,FBtr0273407 3 2 2 81 3L 19650463 19656390 TTTCCATCGAGAGTAATCCCT 58 19650402 19650423 CGACTAGTGACATATTGTGCAG 59 NA Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 3 2 2 80 3L 19539055 19539243 CATTGTACAGGTTCATCTGTG 57 19539284 19539303 CGATGATTATTTGTCCCGTG 57 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 3 2 2 88 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259704 GAATGTACGACCGTGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG3808 FBgn0036838 FBtr0075041 1 1 1 60 3L 18993399 18993420 CATGGGATATTTCGGTATTGGG 59 18993304 18993325 GTCAAATTTGAGGGTGTTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Edc3 FBgn0036735 FBtr0075208 1 1 1 80 3L 17520513 17520593 CTCAGTAGACGCCTTACCC 59 17520451 17520469 CATTTCCTGATCGCATCCG 59 NA Drosophila melanogaster 61 Tom FBgn0026320 FBtr0075620 1 1 1 61 3L 14962616 14962634 GAGGAAACTGGTCAAACCC 58 14962659 14962677 GAGTCTTCCGGAGTAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BobA FBgn0040487 FBtr0075673 3 1 1 187 3L 14939123 14939143 CCAACTTCAATGGAGTGACAG 59 14938956 14938974 CTCCAGTTGTTCGTTGAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9040 FBgn0036394 FBtr0075765 3 1 1 60 3L 13981211 13981231 AAGATGATGCTAGTACCTCCG 59 13981252 13981271 GAACTACCTGTATCGGAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 3 2 2 89 3L 13975946 13976216 TCCAGCGATACAGGAATACC 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 CG8833 FBgn0036386 FBtr0075792 1 1 1 80 3L 13920543 13920563 CTAGCCAAGGAAGTAAAGGAG 57 13920425 13920501 CATAGCAGAAGGCAAGTCC 58 NA Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075810,FBtr0075811 1 2 2 135 3L 13494306 13494395 ACTCTACAGATATGGCGATGTG 59 13494491 13494509 TTAGGTGTACCACTTGGCG 59 NA Drosophila melanogaster 61 Smyd4 FBgn0036282 FBtr0075985 3 1 1 100 3L 12394419 12394439 CATTGAATGACCTCAAGCTGG 59 12394281 12394358 TTCTCCCATGACTGCATAGG 59 NA Drosophila melanogaster 61 CG4300 FBgn0036272 FBtr0076010,FBtr0076009 2 2 2 81 3L 12266641 12266662 CCAGAAGATTCAAATCATGCAC 58 12266125 12266601 ATCGGATTCAGCAATGTTCTG 59 NA Drosophila melanogaster 61 CG6910 FBgn0036262 FBtr0290130 3 1 1 93 3L 12179143 12179226 AGAATCCTTGCGGAGAACC 59 12179280 12179301 GGAATTTGGAGGGATTCTTGTC 59 NA Drosophila melanogaster 61 CG42575 FBgn0260795 FBtr0301438 3 1 1 90 3L 11126617 11126635 CATCTCTGTGGGTCTCTGG 59 11126688 11126776 AGTAAAGCCAGTCGATGAGG 59 NA Drosophila melanogaster 61 Ilp1 FBgn0044051 FBtr0076328 1 1 1 72 3L 9791664 9791682 GAAACCACAAACTCTGCGG 59 9791718 9791736 AGCGTATTAAAGCCATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32032 FBgn0043806 FBtr0076529 1 1 1 80 3L 9086345 9086363 GGAAAGGAGTAATGCGGAG 58 9086407 9086733 CAGAGTCCCATCATCTGCT 58 NA Drosophila melanogaster 61 CG32026 FBgn0052026 FBtr0076584 2 1 1 60 3L 8831641 8831661 ATGCGGACAAGATAGAGAAGG 59 8831680 8831701 ATGGTGCGAATATTATCATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13311 FBgn0035929 FBtr0076589 3 1 1 90 3L 8795138 8795217 CCAAATCCTAAGAAACCTATGCC 59 8795070 8795088 ATTGTTGGCTTGGCAACTG 59 NA Drosophila melanogaster 61 CG32371 FBgn0052371 FBtr0076788 2 1 1 60 3L 7761068 7761086 AAGATCATTCCCATCGACC 57 7761026 7761047 GAAGGAACTCGAAGTTATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10274 FBgn0035690 FBtr0113149,FBtr0077018 2 2 2 93 3L 6173207 6173290 TGAGTGCAAGGTTTGTGGA 59 6173132 6173151 CTCAATAGCACGAAGCACAC 59 NA Drosophila melanogaster 61 Lcp65Ac FBgn0020642 FBtr0076991 2 1 1 110 3L 6138131 6138220 AACTTTGCTTTGGAGACCAG 58 6138293 6138311 CACGAAGGAGTAGGATCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sras FBgn0029121 FBtr0077083 3 1 1 129 3L 5557359 5557439 CTACTTCGATCTGGACTACTGG 59 5557529 5557547 AAAGCTCTGCAGGATCAGG 59 NA Drosophila melanogaster 61 CG4835 FBgn0035607 FBtr0077148 3 1 1 60 3L 5474915 5474935 AATTCCCATAGCGTTCTTCTG 58 5474954 5474975 GCACTTCTCTAACTTGGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ero1L FBgn0261274 FBtr0073217 3 1 1 137 3L 4173148 4173169 GATTCTCTACTCAGAGAAGCTC 57 4173267 4173346 TTGGATAGTCTGCCAAACG 57 NA Drosophila melanogaster 61 CG14983 FBgn0035479 FBtr0073170 3 1 1 60 3L 3949114 3949134 GCGCGGGAATATTCTAATGAG 59 3949074 3949097 CAGAGTGAAGTACTCATATTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14967 FBgn0035420 FBtr0302302 1 1 1 80 3L 3214803 3214824 GGAGTTGACCTGGAATAATTGC 59 3214682 3214765 CGTACAGTCACATTAAGTTCCC 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302675 1 1 12 136 3L 2462973 2463063 CAAATGCAATGCAACCCTC 58 2463163 2463181 CCTTGAATAGCTGCTGGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 1 6 6 95 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 5SrRNA-Psi:CR33363 FBgn0053363 FBtr0086355 1 1 1 60 2R 15650035 15650053 ATACATCGGTTCTCGTCCG 59 15649993 15650011 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 1 3 6 80 2R 20818298 20818316 GTGGCTCTGTTTCATTGGT 58 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 1 2 2 80 2R 20024090 20024109 GATTTCGCGCTTCAAATACG 58 20023971 20024052 CTGTACTCGATAAAGAAGTTCAGC 59 NA Drosophila melanogaster 61 CG13564 FBgn0034973 FBtr0072246 3 1 1 107 2R 19968683 19968701 GGTCACCTTGTTCTTCACG 58 19968772 19968790 TACTGTTGATTCCAGCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17658 FBgn0034924 FBtr0072133 2 1 1 80 2R 19782695 19782776 AAACTTGGTCAAGGAATCTGAG 58 19782817 19782835 ACGAAGCACTTCAGAAAGG 58 NA InUTR Drosophila melanogaster 61 CG5602 FBgn0034922 FBtr0072132 2 1 1 88 2R 19778248 19778325 GTTCCTAAGATTGATGCGAAGAC 59 19778371 19778391 TCTACCTTGGGCTTAGTTTCC 59 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0071838,FBtr0112820 1 2 3 80 2R 18424400 18424418 GCAAGGATTACTTGGCCAG 58 18424274 18424359 AGGGAATGTTGTATCTTCTGTG 58 NA Drosophila melanogaster 61 CG30393 FBgn0050393 FBtr0071620 3 1 1 60 2R 17154030 17154053 CTAAGGAAGATTACCATACTCCTC 57 17153993 17154014 GAATCCTTTACAGTTAGCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 2 5 5 84 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844995 14845243 ACTGCTAAGACTCTTGTACCTG 59 NA Drosophila melanogaster 61 dpr13 FBgn0034286 FBtr0300215 2 1 1 80 2R 13865172 13865191 TTCTGGTATCACGATAACCG 57 13865038 13865129 AGATTGAAAGTCCGGTTCC 57 NA Drosophila melanogaster 61 ste24b FBgn0034175 FBtr0087060 2 1 1 99 2R 12887566 12887587 GGATGATCCACTAGCAATACTC 58 12887435 12887506 GTAGGCCACTTGTATGTCC 57 NA Drosophila melanogaster 61 RpLP2 FBgn0003274 FBtr0087105,FBtr0087106 2 2 2 124 2R 12473798 12473817 AGAAGATCCTCAGCTCTGTG 58 12473904 12473922 CATCGAGGAGAGCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 2 5 5 82 2R 12093318 12093420 TGAAGTGAAGAAGGCATATCGA 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG30087 FBgn0050087 FBtr0100573 3 1 1 91 2R 11580275 11580353 CCCAATCTAAGATTGCGACTG 59 11580406 11580424 CCATACTCCTCAGAACGGG 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 3 5 5 81 2R 11211644 11211716 TGCCTGATGCAATGAAACC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Fs FBgn0259878 FBtr0087398 3 1 1 147 2R 11124039 11127084 TATGAAACCAGTGCGTTTGC 59 11123911 11123932 CTGCGCTTGAATTTGTAATTCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 1 3 5 81 2R 9846756 9846774 CAGCAGCAATGTGAACTCG 59 9846588 9846712 AATATTCAGGGATCGTCCGG 59 NA Drosophila melanogaster 61 CG30062 FBgn0050062 FBtr0087706 1 1 1 60 2R 9333668 9333689 AACTCTACATACTGGATGTCCC 59 9333629 9333648 AATTCGGCAATACAAAGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 3 1 1 141 2R 8816707 8816725 GTGATCATGAAGGCTCGTG 58 8816829 8817290 CTCTATCGCAATCTGTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Pimet FBgn0033686 FBtr0087984 1 1 1 80 2R 8039028 8039138 CAATTGAACTAATCGAGCACGT 59 8039179 8039197 ATTTCGGCTGCATGAAACC 59 NA Drosophila melanogaster 61 CG8888 FBgn0033679 FBtr0088022 2 1 1 85 2R 7964798 7966812 CGATAACAATATGCGCCGT 58 7964731 7964749 GAATCTCGTGCGACTTCTG 58 NA Drosophila melanogaster 61 CG13193 FBgn0033650 FBtr0088029 3 1 1 118 2R 7656040 7656539 GATTCGGACCAACTCTTCGA 59 7656620 7656638 ATGGATGTCCAGGTTCAGC 59 NA Drosophila melanogaster 61 zetaTry FBgn0011556 FBtr0088164 2 1 1 60 2R 7227257 7227277 GATGGCGTTATCACCAATGTC 59 7227217 7227235 CAGCTCCCGAGTAATACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or47b FBgn0026385 FBtr0088166 3 1 1 80 2R 7207815 7207885 CACCAGCACATTATCAAATTGG 58 7207756 7207776 GAAACTGGCCATTAATTGTGC 58 NA Drosophila melanogaster 61 Cyp12d1-d FBgn0053503 FBtr0089418 2 1 1 60 2R 7013047 7013066 ATCTTCAAGATCAGCCTCCG 59 7012946 7013029 CTCCTCCGTTATACTAGATTTAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 trsn FBgn0033528 FBtr0088306 1 1 1 80 2R 6367094 6367176 GCAGTACTACAGATACTCCGA 58 6367034 6367054 TCCAGGTAAATAACCAAGGCA 59 NA Drosophila melanogaster 61 sut1 FBgn0028563 FBtr0088777 2 1 1 86 2R 3973574 3973836 TACTTTATTGGCGCAGAACTG 59 3973884 3973902 GAAATTGCACGTCCACGAG 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871,FBtr0113053,FBtr0088872 3 4 4 80 2R 3864341 3864361 CCTTTGGAATTAAGGAGGACG 58 3864219 3864305 AGATGTATATCCTCGGTACTTTGAG 59 NA Drosophila melanogaster 61 CG1946 FBgn0033216 FBtr0088929 1 1 1 82 2R 3602548 3602569 ACGTCATTCTTCACCTATACCT 58 3602612 3603050 ATTTCGCCGTAGTACAGCA 59 NA Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 1 2 2 96 2R 2561686 2561774 ATTCGCAGTGACGAGTCTC 59 2561834 2561852 ATAGGCAAAGGCGTAGTCC 59 NA Drosophila melanogaster 61 CG14589 FBgn0033063 FBtr0085978 1 1 1 80 2R 2025310 2025503 CACGAACAGAAACCAAGGC 59 2025547 2025565 CAGAAACATCTGGCGAGTG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-640d FBgn0083023 FBtr0113547 1 1 1 77 2L 20419670 20419688 CTACAATGCTCCAAGAGCA 57 20419727 20419747 CGAATTAAATGCATCCACAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2528 FBgn0032969 FBtr0300121 2 1 1 76 2L 21981730 21990854 CTTCAGGAAGCTGAAGCAG 58 21981672 21981690 CCTGCCTTCGTATAAACCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 His2A:CG33832 FBgn0053832 FBtr0091836 1 1 1 60 2L 21483505 21483527 CTAGAATTATTCCGCGTCATCTG 59 21483546 21483565 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33899 FBgn0053899 FBtr0091903 1 1 1 60 2L 21458997 21459015 CGTAATTCGTGATGCCGTG 59 21458955 21458974 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 bur FBgn0000239 FBtr0301342 3 1 1 80 2L 21177256 21177274 TGCTCAAGAAGGATGTTCG 57 21176961 21177212 GACTGAGGCGACTAAAGAG 57 NA Drosophila melanogaster 61 CG9318 FBgn0032880 FBtr0081393 3 1 1 83 2L 20733974 20733992 CTTCTATCTGCCCGGACTG 59 20733000 20733930 TACAACAAGATTTCCGACTTGC 59 NA Drosophila melanogaster 61 CG2617 FBgn0032877 FBtr0081391 2 1 1 60 2L 20682837 20682856 ACTGCCTCCTAGACTTTGTG 59 20682879 20682897 CTGTTCAGCAAGCTCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389,FBtr0081390 1 2 2 83 2L 20678068 20678086 AAAGCGACTTTGATGGAGC 58 20678130 20678211 TCCATTGATCGTTAAGTTCGTC 58 NA Drosophila melanogaster 61 CG17472 FBgn0032868 FBtr0081382 2 1 1 61 2L 20634570 20634594 GATAATAGCACTCTTAGTATTGGCG 59 20634607 20634702 CATCATATTCCTTACTACTAAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15475 FBgn0032867 FBtr0081381 2 1 1 60 2L 20614682 20614701 TGGCTCACAATTCAACACTG 59 20614724 20614742 ACCAAAGGATTCTCCAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15477 FBgn0032865 FBtr0081380 3 1 1 106 2L 20544769 20544787 CAGAACTTGGCACATGGAG 58 20544857 20544875 GTATACGGACATTCCGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 2 2 2 81 2L 19762293 19762495 AGAAACAGGGCAAATACATCG 59 19762232 19762250 ATTGAACCGATCGACACCA 59 NA Drosophila melanogaster 61 CG10166 FBgn0032799 FBtr0081279 1 1 1 80 2L 19525999 19526019 CATACATGGCATCAAACATGC 58 19525871 19525960 GGAATGAATTTGGGATGATGAC 57 NA Drosophila melanogaster 61 tj FBgn0000964 FBtr0301669 3 1 1 60 2L 19465116 19465134 CCACCAGAGCAGTATGGTC 59 19465158 19465176 CTCCCGAAGATGTGTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpn3 FBgn0261396 FBtr0302289 3 1 1 98 2L 19052196 19052214 GGGTAGCCTCGAAAGAGTC 59 19052337 19052355 GTGCAAGATTCCGGAAGAC 58 NA DesignNoJunction Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 3 3 4 80 2L 16313443 16314464 TAGACGATACGAAGATGTACGA 58 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 CG31828 FBgn0051828 FBtr0080742 1 1 1 122 2L 15370783 15373080 CAACAGTGCTGCTATTGCC 59 15370679 15370697 AATTTCTCAATGCTCGGCC 58 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496,FBtr0301495,FBtr0114465 3 4 4 80 2L 14611913 14636094 ATTGTACAGAACAAAGCGCT 58 14611852 14611872 TAATCATCAACCGAGTACGTC 57 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462,FBtr0080461 2 2 2 80 2L 13300858 13300937 GTTACATGAGTATTTCGACTGGG 59 13300976 13300995 CAGGAGACCAGAGTGATGAG 59 NA Drosophila melanogaster 61 ACXE FBgn0040506 FBtr0080416 3 1 1 81 2L 12925624 12925643 TCGCTCCCTAGGAAATTGTC 59 12925685 12925766 CTCTGCACATTTAGCCTTGAG 59 NA Drosophila melanogaster 61 CG5792 FBgn0032455 FBtr0089908 2 1 2 82 2L 12713575 12713657 CCAACTACGTTTCTTCGCAG 59 12713512 12713530 CACATAGCCATACTTGCGG 58 NA Drosophila melanogaster 61 Vm32E FBgn0014076 FBtr0080216 3 1 1 92 2L 11171357 11171375 AGTTGCAGCAATTTCACCA 58 11171283 11171302 ACTAGTACTGTTGACCCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13110 FBgn0032111 FBtr0079805 1 1 1 60 2L 9350625 9350643 TAAGCCTGGACTGAAAGTG 57 9350664 9350685 CAAGTAGAACCTATCAACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9483 FBgn0032072 FBtr0079738 1 1 1 60 2L 8866962 8866980 CGGACTTAGTGTGATCCTG 57 8866999 8867022 GGTGTAACCTATAATGATCCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CSN8 FBgn0261437 FBtr0079646 1 1 1 80 2L 8365315 8365398 GGAGGATCTTCTAAATAAGCAACG 60 8365435 8365455 AGATTGTGCTGGTAAATGGAC 59 NA Drosophila melanogaster 61 CG14273 FBgn0032024 FBtr0079605 3 1 1 135 2L 8343715 8343733 GTTGTAAGCGAAGAGGAGG 58 8343831 8344080 ATTCGTTAAGTTGGAGCCTC 58 NA Drosophila melanogaster 61 CG13773 FBgn0042092 FBtr0079372 1 1 1 154 2L 6907356 6907376 CATACGTTTCACAAACCAGAG 57 6907124 6907241 TGGATTTGTTCTTTGGAGCT 57 NA Drosophila melanogaster 61 Rca1 FBgn0017551 FBtr0079342 2 1 1 60 2L 6852602 6852620 ACCACAACATTCTTTCGGG 58 6852644 6852662 AGTAAAGGTCCTGCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273247,FBtr0300327,FBtr0273248,FBtr0273250 2 4 4 80 2L 6682192 6682211 GACGTAAACCTATATGCGCT 58 6682075 6682150 TTGAATGGCTCCACTAAGGA 58 NA Drosophila melanogaster 61 CG11029 FBgn0031735 FBtr0079136 1 1 1 60 2L 5747386 5747404 GCTGACCAAACTAACTGCT 58 5747428 5747446 AGAGAAGAACCTCCAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15634 FBgn0031621 FBtr0077378 2 1 1 60 2L 4688326 4688344 GGTGCAGTACAGACAAACC 58 4688363 4688386 GTAGGCAATAACGTCCTTAAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42464 FBgn0259954 FBtr0300300 1 1 1 186 2L 3699544 3699628 GAATCAGCAGATGAAATCTGTC 57 3699774 3699793 AGAGATCTTCGCAAATTGCT 58 NA Drosophila melanogaster 61 CG17264 FBgn0031490 FBtr0077647 1 1 1 80 2L 3019863 3019882 ATCTTCAGCATAGGTGGTGG 59 3019923 3020000 CACATCGTAGTACAAGTGCTG 59 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 3 3 3 92 2L 3017842 3017863 TCGGATTATTTATACCACCTGG 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077775 1 1 5 80 2L 2454841 2454864 ATACTATCTGCCAGATACGAAGAG 59 2454903 2455069 GTCGCTTGCAACTACTCAG 59 NA InUTR Drosophila melanogaster 61 CG14341 FBgn0031315 FBtr0077964 3 1 2 80 2L 1166856 1166874 ACAAGTCTGGAGTGAACCA 58 1166916 1166996 ATCGCTTTGAGTATCTGTTCC 58 NA Drosophila melanogaster 61 CG4291 FBgn0031287 FBtr0078034 2 1 1 176 2L 851867 851885 CAATGTCGACGAGGAAGTG 58 851651 851727 TCAGGTGCTTTCACTTCCA 59 NA Drosophila melanogaster 61 Ptth FBgn0013323 FBtr0301522 1 1 1 80 2L 576130 576152 GATTTCTATGAGGATCTGGTGAC 58 576014 576091 GAGCTCATTCGTAACTTTGC 57 NA Drosophila melanogaster 61 RpI135 FBgn0003278 FBtr0078054 2 1 1 82 2L 404462 404542 AAACTCAGCAGGCATTTGG 59 404588 404606 GAGTTATCCAGTCCCACGG 59 NA Drosophila melanogaster 61 smo FBgn0003444 FBtr0078129 3 1 1 147 2L 277856 277943 AACATTATGATGTTCCTGGAGG 58 278049 278069 AATTGAGAGTCCCATTGATGG 58 NA Drosophila melanogaster 61 CG17075 FBgn0031239 FBtr0078142 2 1 1 60 2L 266230 266250 CTAATCACCGGGCTCTATCTG 59 266190 266209 GATCTGTCAGTAAAGCCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 3 6 6 81 2L 11515 11793 CAGAGGAAACCATTGGTCG 58 11452 11473 GGAATTTCACTCATGTTTACGG 58 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416 1 1 4 91 2L 28474 28492 ACCTATCACACGAGTGGAC 58 27481 28419 AAAGCTGTGAGAAACGGTG 58 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415 1 1 4 92 2L 38598 38618 CGATGGTATTATTCACCAAGC 57 38080 38545 TCTTGAGAACTATAGGCGGT 58 NA Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733,FBtr0302164,FBtr0078101 2 3 3 82 2L 74974 74994 GATAAGTTTCACGGTGACTGG 59 75091 75115 CTCGAGAGTCATTGTTATAAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 3 3 3 87 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831774 831793 CAGTACATGTTCTGCTCCAC 58 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010,FBtr0077917 1 2 2 121 2L 1586941 1586959 CTTTGCATGTCCTGCTCAC 59 1586775 1586859 GTTACCCAAGGTCAGTAAACTG 59 NA Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 1 1 1 108 2L 1705025 1705043 TTTAAGATCGGCCCTGCTC 59 1705400 1705418 AGTCCATCTGCATTTCCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 3 2 2 118 2L 1851266 1851702 GCTAATTGTGGTGTCCGAG 58 1851784 1851802 AGTTGGAGTAGCACACTCC 59 NA Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 1 2 2 84 2L 2368139 2368157 CTCTTTGCTAGTGGCTCCA 59 2368204 2368325 AGGAAGTGATCTGAGTGCTG 59 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 2 2 4 86 2L 2793385 2793405 AGAACCAAAGATGGAAAGGGT 59 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 2 3 6 82 2L 3097977 3097995 CCAACAGACAACCAAGGGA 59 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 CG34394 FBgn0085423 FBtr0112641 2 1 3 105 2L 3362708 3363006 GAGGAGAGGCATGAATCAG 57 3362621 3362641 CTCTTGAATGCTGTCATTGTC 57 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 1 2 2 80 2L 4651675 4651769 CAAGCAGAACTGCTTCTGC 59 4651812 4651831 CAAGGATACTTGTTGGAGCG 59 NA Drosophila melanogaster 61 CG12194 FBgn0031636 FBtr0077385,FBtr0300756 3 2 2 80 2L 4840093 4840173 CCTTGATTCTAGGTTGGATGGA 59 4840214 4840232 GTTTGGCCAATTCTCCACC 59 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077396 3 1 6 154 2L 4932038 4932059 TTTATGATAACGGACCACACTC 58 4912770 4931923 GTTACTTCGCATTTGCTGC 58 NA Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 1 2 2 95 2L 5547826 5547844 CATCTTGGAAACCAGCGAC 59 5547903 5547981 ACGAAGTATCTGTCGGCAC 59 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118 3 1 3 92 2L 5580898 5580974 CACAAGAAGGAAAGAAGAGCAC 59 5580827 5580848 GTCATGCAGAATAGTTCATGGT 58 NA InUTR Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 1 2 4 80 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718593 5718666 AGCATAGTTCTGTATGCGCT 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 3 2 4 81 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718592 5718666 TAGCATAGTTCTGTATGCGCT 59 NA Drosophila melanogaster 61 CG9029 FBgn0031746 FBtr0079143 2 1 1 259 2L 5886035 5886053 GTATTTGCATTCGCCTGTG 57 5886341 5886359 TCTTGCTTATTGGCTTCCA 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 1 3 6 80 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688667 6688685 GAGGATCTGTCTAGGCAGC 59 NA Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 3 1 1 89 2L 6745192 6745216 GGAGGCCATTATCAATGAATATGAG 59 6745072 6745092 TGATTGATTTCCAACAGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 LanB1 FBgn0002527 FBtr0079491,FBtr0079490 2 2 2 60 2L 7817640 7817737 CCTGTATAGATTGTCAGGACTC 57 7817755 7817776 TATCCATCTAAACAGCTGTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300334 2 1 4 149 2L 8174685 8176577 TGATTAAGCCACGGTTGGT 59 8176690 8176708 TGTTCTCCTGTTCCGATCG 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300331,FBtr0300334,FBtr0300332 2 3 4 169 2L 8183486 8183504 ACCATAAGACTGAACCGCT 58 8183702 8184141 GGTTCACTTTCATCGCTCTC 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 3 2 9 104 2L 8227138 8227677 CTTTATTGCAACCGGATTGGA 59 8227054 8227072 GTAACAGTGAGGACCTCGT 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 3 2 9 92 2L 8226594 8227677 CTTTATTGAAGACGGCAAACC 58 8226522 8226540 CAATCCAGGGTGAAGTTGG 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 3 6 6 86 2L 8262337 8262357 CAACGGAACTCTATTGGATGC 59 8262206 8262289 AAGTGGGAGTTGTCCTTGG 59 NA Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 1 2 2 84 2L 8364197 8364215 AAGAAGGGTCTGACTCCCT 59 8364069 8364087 TGTTTCCGTTGACGAAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825,FBtr0301909 1 5 5 80 2L 9537728 9537811 GCATATGGATTATTGCTACGAC 57 9537852 9537870 TTAGACTTGGTCTGTGGCT 58 NA Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 2 2 2 252 2L 9967696 9967714 TGAAGACCTGGTTCAACCA 58 9967991 9968009 GATTTGTTCTTGCGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL13 FBgn0011272 FBtr0079888,FBtr0100164 3 2 2 252 2L 9967697 9967715 GAAGACCTGGTTCAACCAG 58 9967992 9968010 GGATTTGTTCTTGCGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 2 3 3 117 2L 10774659 10774752 CGACAATTGTCCAATTCTCGA 59 10774562 10774580 GTTCCAGTTGAATCCAGCC 58 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 2 3 3 168 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976004 10976023 AACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091682,FBtr0091679,FBtr0091683,FBtr0091680 2 5 5 60 2L 11278975 11278996 CAGTCTAATACAACTACGACGG 58 11279017 11279035 TCTGCATCTGCTGGTACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 2 5 6 101 2L 11835159 11835177 CGAATATGTCGTTCACCGC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0110957 2 1 4 129 2L 12389662 12393403 ATCTGCCAGGACTAAATTTCCA 59 12393493 12393511 AGTGGGTTAGATGCTGCTG 59 NA Drosophila melanogaster 61 ACXC FBgn0040508 FBtr0080413,FBtr0100494 1 2 2 86 2L 12912881 12912955 ACGTACAGCACTATAACGC 57 12913005 12913023 AATTGATGCTCAACACGGT 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 2 3 9 88 2L 13274369 13276259 CTTTGGTGGTAATGGAGTCTC 58 13276395 13276413 TTGGAGGCACATATTGCTG 58 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080546 2 1 3 95 2L 13836346 13836367 ATGCCATATACGAACTGATCGA 59 13836420 13891308 CAAACGAATCTTCAATGCAGAC 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0300845 3 1 3 99 2L 14848243 14848681 GATGAAAGGTGTCGGAATCG 59 14848163 14848181 CGATTCGTACAGATAGCGC 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 1 3 4 80 2L 16313443 16314464 TAGACGATACGAAGATGTACGA 58 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 1 1 1 80 2L 16366546 16366564 TATGAAGGCGTGAGGACAC 59 16366672 16366690 TTCATGCAAATCTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080901 1 1 16 81 2L 16777428 16778011 CTTCAAGATGCGGTACCAG 58 16778056 16778074 AATCAGAACCTTGGAGGCT 58 NA Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080918 2 1 4 91 2L 16817451 16820121 AGCCAAACAAGACCATCAC 58 16820176 16820194 GGATCCGCTATTCTTGGTC 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 3 4 12 114 2L 17717920 17717941 ATAGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 3 2 2 83 2L 18141799 18141817 GTATTGCGAAGTGCTCGAG 59 18141241 18141752 CTTCTGGAAACTGGCTTGC 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 1 4 4 103 2L 18827251 18827520 AGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089317 2 1 4 102 2L 18857395 18858963 ACCACCCAATGATCTCTACTC 59 18857313 18857331 GGATCCACGACTCCTAAGC 59 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 2 2 2 103 2L 18862251 18862269 TATTAGGGACAAGCGACCC 58 18862105 18862185 CATTGTAGCAGGTTCTGAGC 59 NA Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 1 2 2 80 2L 19419106 19419125 AAACTTCTCCTGCTGTTCCT 59 19419164 19419317 CTCTAGGTTATATCGGTTACCCA 58 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081208 3 1 3 193 2L 19437839 19440677 TGAATTCCCACTTGGAGTACC 59 19437666 19437684 CTTCTAGAAGACGGGCCAG 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 2 3 3 255 2L 19436954 19437040 CGTGATCTGATTAAGCGGT 57 19436541 19436559 TCTGTGTTTCTGGCTCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 1 2 2 83 2L 19959684 19959762 CATCTTCGTGTACGATGAGC 58 19959808 19959826 ATTTCCAGGTCGATGATGC 58 NA Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485,FBtr0081486 2 2 2 60 2L 21232832 21232850 AGTATTTACCTCCCGTCCA 57 21232790 21232808 GGAGCAGAGTAAACTGGAG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081484 3 1 3 148 2L 21275798 21281141 ACATGCTAGGAATCCCAGC 59 21281253 21281271 GATTGACCCGTGTCTCCTC 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 1 5 5 82 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666303 21666321 GAAGCATTTCGTTGGAGGC 59 NA Drosophila melanogaster 61 step FBgn0086779 FBtr0085910 3 1 3 158 2L 21756618 21757174 CTCAATGCCAGAACTTACACC 59 21743898 21743916 GAATGCTTGCAGTCTTCGG 59 NA Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319 3 1 2 130 2L 11958661 11961939 GTATGCCATAAGACAAATGCCA 59 11958552 11958570 CCAACCCAAACAGGAAACG 59 NA Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 1 2 2 99 2R 1566989 1567070 GTAAATGGTCTTCCGGTGAC 58 1566909 1566927 TCTTGACTCCAGTCAGCTG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504 2 1 4 83 2R 1605264 1613339 CTGTGATGCATTGGCAGAG 59 1605199 1605217 TCCCTTGATGTGCTACAGG 59 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 1 4 5 81 2R 2503184 2503202 GAGCTGGAAGCTATCTCCA 58 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086201,FBtr0086198 1 2 11 109 2R 2764805 2764823 AATGCTACAAAGTCCGGAG 57 2764020 2764732 TCATAAACATACCCGTGGC 57 NA Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 1 2 2 60 2R 2771946 2772025 AAAGAGACCTTAGAGAAGCTGG 59 2772045 2772064 CGCTTAAGTCTGACTTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 1 2 59 80 2R 3225659 3235366 GTGCAAGTCATGGTTCCAC 59 3225597 3225615 GACCGAAACAGAGTCCTCC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111086 2 2 59 80 2R 3247432 3247450 ACTCGAGTTCCCAAGATGG 59 3236471 3247391 CTTGTACCATCTAAAGAAGGGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084 1 1 59 80 2R 3241193 3249236 ATTGGTCATCACAGAACCC 57 3241131 3241149 ATTCGTTCGATCCAAGAGC 58 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 3 2 2 105 2R 3336437 3336509 GCTAAGAAACGCTACGAACAG 59 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA InUTR Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 3 5 5 80 2R 3371062 3371165 ACTTTATGTGGGATATCGAGGT 58 3371003 3371021 CGCAAGTGCGATCTTTCTC 59 NA Drosophila melanogaster 61 mRpL52 FBgn0033208 FBtr0088942 3 1 1 60 2R 3561779 3561797 AACAAAGATCTGCTTGGCC 58 3561675 3561693 AGTAAGAGCAATGCTTCGC 58 NA DesignNoJunction Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 2 2 2 119 2R 3850891 3850967 GAATATAGACCACGCGGTC 57 3851050 3851068 GTAGGGATCAATCGGAGGT 58 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0088716 2 2 3 92 2R 4619313 4619682 CTGCTATTCAATATGCAGTCCG 59 4619242 4619260 CTCACGGAGAACTTCCTCG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 1 2 2 80 2R 5051522 5051600 TTCGATCTTACAGGATGATTGC 58 5051463 5051482 ATGCATAACCAGAACCAAGG 58 NA Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088620 1 1 2 154 2R 5051972 5052051 GAAACAAAGAGAATTGAGGAGC 58 5051839 5051857 AAAGAGCACATGAGAAGGG 57 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 3 5 5 80 2R 5066384 5066405 AGGAAGATCTAGACTCCAAGGT 59 5066245 5066343 CCTGGTCGCATTTATTGGC 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 2 2 4 175 2R 5120058 5120076 CTATGCAAGATCCGTTGCG 59 5118140 5119257 TCCCATCCCACATTCACTG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0302602 2 3 10 117 2R 5146430 5146449 AAAGGACAGGTGATCCAAGG 59 5143531 5146350 GACTAATACGGGCCTCCTG 59 NA Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 3 3 3 84 2R 5649051 5649131 TGATATACGTTGCGGTTGTG 58 5649178 5649196 GTAGATGTTCACCCGGGAG 59 NA Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 2 2 2 91 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848325 5848344 GGCCTTGTCGAAACTTACAG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 1 8 10 83 2R 5993536 5993555 TGGCCCTTAACTTCTCAGTC 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281 3 2 4 86 2R 6358248 6358958 CTTGTATCGGACGGATATGAC 58 6358182 6358200 ATCCCAAGTGAGCCTAGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 3 5 12 89 2R 6449615 6449635 GACATTATCTTCACCGACCTG 58 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0088196 3 2 3 119 2R 7117001 7117019 CCCAGAAGGACTTCTACCC 58 7116523 7116918 TACTCTGTGCTCCTGTCAG 58 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088074 1 1 2 150 2R 7559788 7560224 TTGTACCTTCTCCCAGGTC 58 7560338 7560558 CCAAGAACCAGCATCTTGG 58 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087897 2 1 2 156 2R 8220087 8220105 CAACGAGTTAGTGGTGAGC 58 8220225 8220311 CACAATAATGGGCTGAGCA 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 1 2 8 94 2R 8561425 8563639 ATGCCAAGCTCAGTCAGAG 59 8560790 8560808 GGCGAACATGTCGAATAGC 59 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 2 2 2 96 2R 8828667 8828756 CAGTTGAGAAATCCGAGGGA 59 8828590 8828608 GTGAGATTTAGGCCCTGCA 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087774 2 1 2 96 2R 9046336 9046354 CACATTGCCGATCATCAGC 59 9045768 9046277 GAATTCCTTCGTAGCTGGTG 58 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 1 3 3 80 2R 9057272 9057290 ACGAAAGCATCTCCTTTGG 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 1 4 4 80 2R 9074535 9074555 ATATTTGCGCCACAAGATGAC 59 9074417 9074494 TCCTGCGTGATCTTACTGAC 59 NA Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 3 2 2 80 2R 9095636 9095655 TCACAGGAATCAAGAAAGCA 57 9095696 9095775 CTTGGCAATTGTATCTTGCTG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 1 2 6 87 2R 9148387 9150154 GACAGTCTTCCAGGTTACCC 59 9150204 9150222 GTCCTCCTCGTTGATCTCG 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087703 1 1 6 137 2R 9333088 9337689 AGCATAGACGACACCAGTC 59 9332561 9332579 CTCCAATTCGCGTACAGAG 58 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087703 2 1 6 139 2R 9333090 9337691 AAAGCATAGACGACACCAG 57 9332561 9332579 CTCCAATTCGCGTACAGAG 58 NA Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 1 2 2 80 2R 9391976 9391995 ACTTTACGCGTTACTCAGTG 58 9392037 9392113 CTTCTTTAACCGTCGTCTGC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 3 9 15 147 2R 9759602 9759621 CGTGGAGAAATTGATCGAGG 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 3 3 3 82 2R 9835606 9835691 TCCGTGCCAGATATCATCTG 59 9835543 9835561 CGTACGATCCTCTGAGCAG 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414 2 1 2 128 2R 10927548 10927632 TCTACAAGCTGCCCATCAC 59 10927722 10927742 TGGAGCTCTCCTGATATTTCG 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 1 4 6 80 2R 11152373 11152395 AACGACTATATGATTCTGGAGGG 59 11152254 11152335 TACACCAATCTCGAATCCCTG 59 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352 2 1 2 80 2R 11455695 11455713 GCCAACATGGGAATAACCG 59 11455207 11455340 CCTCAGGTAGCCCTTTGAG 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 1 7 7 124 2R 11550671 11550750 TTATCAATGCACAGGGCCA 59 11550565 11550584 GTACCGATACTTCTTGCCGA 59 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 2 3 3 80 2R 11812361 11812438 CAGGATCGTTTGAGAATCCC 58 11812300 11812323 GATAGGAAAGCAGATAAGGATTGG 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0113084 2 1 5 107 2R 12093077 12093224 CTTTCCGATGCACGTAAGC 59 12092988 12093006 GCGATAGCGGGTATAGGAG 59 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 3 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 1 3 3 88 2R 12305201 12305282 CAAATTCTCAGATGGAAAGGCT 59 12305134 12305152 CTTGACCAGGAGTTAGCCT 58 NA Nonspecific Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087094,FBtr0087097 2 3 5 81 2R 12442917 12442935 TCAGTCGCAGTTGTAGTCG 59 12442979 12443119 ATTAGAGGTACGGCAACCAC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 3 3 5 154 2R 12566511 12566529 ATCCCGAGCTCTTCATTCC 59 12562745 12565928 CATCCAGTACTGATTTCCTCCT 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 2 4 4 91 2R 12746191 12746209 CTCCAGCTCTGACGATAGC 59 12746261 12746344 CAGAAGGATTGTAATCTGAGCC 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 1 3 4 80 2R 12747015 12747035 ATGACAAAGATGAATCCGACG 58 12747077 12747153 CGCGTATTTGTTCATCCGT 59 NA Drosophila melanogaster 61 CG6421 FBgn0025827 FBtr0087043 3 1 1 69 2R 12759859 12759877 CCTTCATTGGTTCAAGGCC 59 12759967 12759985 AAATGCAGGTGAGACACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626 2 1 6 147 2R 12901494 12903178 TTTATGTATTTGCGGCCGT 58 12901365 12901383 ATATGGTGTGATTGTCGGG 57 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 1 3 6 81 2R 12897606 12897624 GAGGCTATCGACCAGAAGG 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 3 2 9 81 2R 12957456 12957476 GTGTATCGCTTGAGGATAACG 59 12955712 12957417 GAATCAGACCTATTTGAACGACG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290299 3 1 7 81 2R 13239795 13260588 TTCCGACAGATTAGAGTTACTGG 59 13260626 13260647 TCTACAATTTAACCGACTGCAC 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 2 2 3 80 2R 13359115 13359204 CATCACAGCTATAGGAGCTC 57 13359244 13359265 CAATATGGACATCACTTTCTGC 57 NA Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 2 2 2 80 2R 13390401 13390419 ATTCGAAGCAAAGATGGCC 58 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 3 3 7 99 2R 13715431 13715449 GGTCTAACGGTGGATTTGC 58 13715508 13715851 CCGTATAATCAAAGGACTGTTGG 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 3 3 7 97 2R 13715433 13715451 TCTAACGGTGGATTTGCCA 59 13715508 13715851 CCGTATAATCAAAGGACTGTTGG 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 2 2 4 80 2R 14018832 14018852 TTGGAAACACTGAAGGATCTG 58 14018536 14018791 AGAGTCGTTAAACAGACCCA 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299943 3 1 4 85 2R 14645020 14645139 ATAGCCCTATTGGTTCACCC 59 14644954 14644972 CAGGACGGATTGAATGCTG 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 2 4 5 95 2R 15024322 15024463 TCGACCAGAACGATAAGGA 57 15024245 15024263 GAAGGCATTTAACGCATGG 57 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 3 3 12 82 2R 15064176 15064195 TGATTAGTCACAAGCAGTGC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 3 10 10 80 2R 15298142 15298160 ACAAGGTGGATATGCAAGG 57 15298007 15298099 AATGGAGGACAAAGTGACTC 57 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086474 2 1 2 86 2R 15558792 15558876 GTTTCTCAGGAAATCAGCCC 59 15558925 15558943 ATAGATTCACCTGGCCTGC 59 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 1 3 5 84 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212011 TTTAGGGAGCTAGCCATCTC 58 NA Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 3 2 2 84 2R 16518245 16518263 AACGATCGCATTATGGAGC 58 16517761 16518201 GATAGACGATCAGCAATAGAACC 59 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 3 4 4 91 2R 16557770 16557788 GCGATAAAGTTGAGCTGCC 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0071527,FBtr0301894,FBtr0301899,FBtr0301893,FBtr0113371,FBtr0301902,FBtr0071528 3 8 15 89 2R 16911179 16911197 GAGTTAACAGCCAGTTGCG 59 16911248 16911489 CAATTTGGAATGTTCGCTTGG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302705 3 2 8 128 2R 17187892 17191402 CCTGGCTATAACATAAATCGCT 58 17191491 17191509 GATGGTAAGATGTCGGCTG 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 2 6 6 80 2R 17299910 17367603 AAGATCAGAAATCGGTGAAACC 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 Fkbp13 FBgn0010470 FBtr0071703,FBtr0300397 2 2 2 80 2R 17375862 17382650 GAAATTCGACTCGAGCTTCG 59 17375801 17375821 TGATCCCAACCCTTAATCACC 59 NA Drosophila melanogaster 61 CG42497 FBgn0260223 FBtr0300626 2 1 1 112 2R 17578443 17578461 AGAGATCCGTTGAGAACCG 59 17578349 17578367 GTAATCGAATCGCCTGTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 2 2 2 115 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357176 18357194 GTAGGGCTATGCGAATCCT 59 NA Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 1 2 2 155 2R 18728408 18728426 GTCGTTCCTGCTCTTTCTC 58 18728605 18728625 AAACTGGAGAGTATGTACGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 3 8 13 141 2R 18813127 18814634 GCTTATAATATTGTTCTGCGGC 58 18814812 18814832 CGTGAATGTTTCTATGCAGGT 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 1 3 13 83 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817833 18819046 GGATTTGTCCTCATTGCGT 58 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111 1 1 2 181 2R 19310077 19313372 ACAAACGAGATAATCATCACCG 59 19309754 19309772 TACAGCACCATGTTCTGCA 59 NA Drosophila melanogaster 61 CG17664 FBgn0034883 FBtr0072107 3 1 1 161 2R 19492025 19492043 TGGAGTTCCTGATCACCTG 58 19491546 19491566 GGACTGGATTCATACTAGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072239 3 1 2 109 2R 19703115 19705583 GTGTCGAAAGAGATGACGAG 58 19703025 19703044 CTTCCTGGAGCTATAGCTGG 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 3 8 8 87 2R 19817432 19817514 GTTCTTCCGTTACATGGCT 57 19817363 19817381 TCCCTCATCAGAGAACACG 58 NA Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0072179 1 1 2 114 2R 19957662 19957682 ACTACGAGTTCATTTCCTGGA 58 19957758 19959524 AACCACACTACACCAACGA 59 NA Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 2 2 2 67 2R 20013301 20013373 CAAAGTCGGCTTCTGTCAC 59 20013252 20013270 AGACATAGGAGCCGTTCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 1 4 4 90 2R 20420157 20420428 TGTTACGATGTCACCGGAC 59 20420482 20420500 TCAGGAAGATCATGGCGAC 59 NA Nonspecific Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0100851,FBtr0072493 3 2 6 120 3L 216998 217018 CGCTAGTTATCCTGATTTGGA 57 217100 217228 ACACGCATTATGTTCAGGA 57 NA InUTR Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567 2 1 2 117 3L 370608 370628 CTTCAAATCCTCAGGCTATCG 58 369665 370215 CAGAACCACCGAATAGTTTGAG 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565 2 2 4 126 3L 452934 452954 GCGATCTTCTATTTCAAGCAC 57 451762 452846 ATTTCAGTATGTCGCCTCC 57 NA Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072677 3 1 2 88 3L 1330920 1330938 GTGCTAAAGGTTGTCTCCG 58 1331305 1331323 GAATCCAGTCCCAAGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 2 5 5 99 3L 1635217 1635235 GATGATCATCATGGGCGTG 58 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 1 5 5 98 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743973 1743991 TTGAGCAGAACAGGATCCC 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 2 5 5 99 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743974 1743992 CTTGAGCAGAACAGGATCC 57 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 1 1 3 112 3L 1803466 1803484 TCCGGAACAAGAAGATCGG 59 1803560 1803805 ATCGTCCAGAGCTTGACTG 59 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 2 4 4 80 3L 2498019 2498105 CTCTGGAAGATGTGAAGATAAACAC 59 2498141 2498161 AGATCCAGCGATTTACTCCAG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 2 6 15 80 3L 3083798 3085210 GCCACTTATATGGTCACGC 58 3085252 3085272 ATATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 1 5 5 84 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131028 3131121 GTTGAGAGTCGATATTATGGGC 58 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 3 1 2 241 3L 3416817 3416835 ATTTGTACCACGGATTGCT 57 3404712 3404731 TTTCTGCGATCCATGTAGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073188 3 3 5 131 3L 3718984 3722167 CTATTCGCTCAACAGGCAG 58 3718871 3718889 TAGACGATATGGCCATCGC 59 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 1 3 3 81 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 1 4 6 238 3L 4418265 4418283 AGGCGATGTAATTGAGGTC 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 1 2 5 180 3L 5160148 5161352 AATGTAAAGGTTACGGCTTCG 59 5156996 5157014 AGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077133,FBtr0077131 1 2 3 188 3L 5566920 5568048 AATCATCAGGCCTACAAGC 57 5566750 5566769 AGTCTCAAGCATTAGCTCCT 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 5 6 104 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583713 TAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 CG8368 FBgn0035707 FBtr0076976,FBtr0076977 3 2 2 95 3L 6600093 6600112 CCACCAACAGGATATTCAGC 58 6600167 6600244 TGAGAGGAATCTTGGCTATCTC 59 NA Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 1 1 1 78 3L 6957508 6957527 GTGGAATTCGGATAAGTTGC 57 6955002 6955020 GAAGAGGTTCACATTGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGEF4 FBgn0035761 FBtr0076886,FBtr0076885 2 2 2 111 3L 7315586 7315662 GTTGAAAGAATCCGTCAAGG 57 7315494 7315513 ATTCACCAAAGAGTTCTGCA 57 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692 2 1 3 60 3L 7324282 7324303 TGATGAACCTTCTCAGATAACC 57 7324323 7324402 AACAGTCTTTACTTCGTCGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 1 5 5 98 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 2 4 4 85 3L 7504534 7504620 GACAATGAGCTCACCATCC 58 7504669 7504687 TGGTAGATGATACGCTGGT 57 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 3 3 15 122 3L 7689773 7689791 CAACTACAGAGTCGACCCT 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 3 11 15 80 3L 7693645 7696960 TATGCTCCATTACAGGCGG 59 7693583 7693604 AGTCATTGACAAATGTCAAGGG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076782 3 1 7 155 3L 7811315 7818694 CTACTTGAACGGCAAATCCA 58 7811179 7811197 TTGAGGTCGGCATCATAGG 59 NA Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 1 1 1 104 3L 8319395 8319413 TACTCCTTCAACTACGGCA 58 8319938 8319956 CTCAACCAGGGAGTACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087 1 1 5 80 3L 8747588 8752552 GCAGTTATTATGGAACCTCCG 58 8752593 8752612 AGAACGATGGTCTGTAGGAG 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773 1 1 6 110 3L 9338072 9338090 CCGTCACAGTTACAGTGGT 59 9338162 9339673 GCTGTGTTAGAAACCTTTGGT 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 2 3 3 98 3L 9503745 9504167 GTCTGTTCCAGGGTAATGC 58 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 2 3 4 172 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856555 9856573 TGATCTCATAGACGGCTCG 58 NA Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300239,FBtr0300238,FBtr0300237 1 3 3 60 3L 9966061 9966082 ATTAGCCTCTGTTAGTATCGTC 57 9966195 9966213 CTTCCAGATGAGGAACCAG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 3 3 3 102 3L 10143593 10144086 ATCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 CG8072 FBgn0036070 FBtr0076295 1 1 1 99 3L 10145142 10145160 ATTAAGTCGTGTCATGGCA 57 10145272 10145290 AATAGGCCATGTTCACCAG 57 NA DesignNoJunction Drosophila melanogaster 61 ect FBgn0000451 FBtr0301385,FBtr0076305,FBtr0076307 1 3 3 80 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10188026 10188044 TCGCCGATAATGTCATCGT 59 NA Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 3 2 2 109 3L 10635601 10635619 CATCCCATCTGCTCAAGTG 58 10635690 10635812 CGTTAAGAACATCATCTCCCT 57 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 1 2 2 100 3L 11438751 11438769 CAGGAGACTTGTATGTGCA 57 11438896 11438914 CTGATTCAGAACCACCCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 1 3 3 80 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730957 11730976 TCAGTGTCACAAAGTTCGTG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 1 3 6 102 3L 11811258 11811276 CATTCTACTGCGTGCAGAG 58 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 2 4 4 93 3L 11873251 11873328 GCATCACAGTGTGATAATTCC 57 11873381 11873401 TGTTCTGCCTAAATACTCGTG 58 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075998 2 1 2 81 3L 12145052 12145073 TTGTCCAATATTCGGATGATGG 58 12145114 12145293 GAGTTGCCCTTGAACATCTG 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167 1 1 3 109 3L 12471220 12472820 GAAACTCAGAGTGGCTATGTG 58 12471131 12471149 ATCCAATGCGATGATCCGT 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 1 2 2 145 3L 12776712 12776730 CGTGTAACTGCAAGAAACC 57 12776893 12776911 TACTGGTGGAGGATTCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 2 4 4 80 3L 12805256 12805274 ACAAGGAGAACGCAAATCC 58 12805315 12805395 GTGTGGGCTTATACGTATTGAG 59 NA Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 2 3 3 113 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033096 14033178 CGGCTTGTTAAAGACCTGC 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 2 7 7 80 3L 14407795 14407883 AGGCTAAGGAAATTACGATCC 57 14407735 14407755 TTCGATCACCCTTCTTTAGAC 57 NA Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299848 2 1 2 96 3L 15041898 15041916 CTACCTTCTGCGTAAGCGT 59 15012036 15041840 AATAGCCACCTCCTTCATCTG 59 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 2 2 4 118 3L 15301835 15301853 TGTACCGATTGTTCCTGCT 59 15301932 15302038 CAAGAAATACGGGTATACCCAC 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758 3 1 4 134 3L 15486664 15488344 CTGGAAGTACAAATGGTTAGATCG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA InUTR Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 1 3 4 80 3L 16376953 16377036 CTTTACTCCCAACTTATCTTCGTG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 2 4 4 80 3L 17008138 17008157 ATACCTTCAAGACCAAGTGC 57 17007995 17008097 CTTTGGCTTGAATGATGACTG 57 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291 3 1 2 99 3L 17014737 17014808 GAGTACACTCTCGGCACTG 59 17014656 17014675 CCAACTTGTCGATCTTGTCC 59 NA Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075292 2 1 2 82 3L 17014633 17014810 AGGAGTACACTATGCTGGAC 58 17014570 17014588 TTCCGACTCCATCACATCC 59 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 3 2 2 139 3L 17503507 17503528 CGGTTACTGTGATAATAACTGC 57 17503628 17503710 CCATGGCCTTATCTTTGGG 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 1 3 7 80 3L 17535994 17536012 GATGTGGATCATCGTCAGC 58 17536056 17536616 GGTGTCTTCATTCGATGGC 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 1 2 3 178 3L 17636817 17637999 TTGCAACACCGTAAAGGTC 58 17636657 17636675 AAGGCGACATGTTCATACC 57 NA InUTR Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 2 3 3 83 3L 17873846 17873865 GATCGTCACTTGGGATACCT 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 Tsp74F FBgn0036769 FBtr0075154,FBtr0075155 3 2 2 80 3L 17885508 17885526 GACGACCAACTTCATCAGG 58 17885372 17885467 ATGCCAAAGATCATCAGTATGG 58 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075148 1 1 4 160 3L 17986084 18051345 CTGATCTAGAATTCGATGGCAC 59 17962545 17962563 CTGCTGATTCTTGGTGCAC 59 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 3 1 1 152 3L 18286560 18286580 TCGAAGGAATCGAAGAAATGC 59 18286364 18286382 TGTTAATATGCACCTCGGG 57 NA DesignNoJunction Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095,FBtr0075096 1 3 4 97 3L 18667331 18667351 TCACACCAGAAACTCTTTCAG 58 18667190 18667272 GTTGGAGCATCAGATAGGG 57 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 3 6 6 92 3L 19853426 19853510 CTAGACAGCATGGAGATCCTG 59 19853564 19853582 CTCATCCTTCCTCTTGGGC 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078253 2 1 3 201 3L 20791865 20791888 CAGTTTATCTAGCCGAAAGTACAG 59 20792331 20792349 ATAGTTATCCTGCAGGGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078307,FBtr0078306 2 2 3 86 3L 21224137 21224155 ATTTGTGCCCTGCAAAGTC 59 21224204 21224279 CGAAAGAATCCCTTGCAACC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0111017,FBtr0301364 3 2 5 155 3L 21914420 21915691 AATATGAGTGTTGAGCTGCAG 58 21915808 21915826 CGTGATAGCTCCGTTTGTG 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0078496 3 1 2 80 3L 22274814 22274832 GATCCAGTCGCTCATTGAC 58 22274875 22275672 AAGTGATGGTAGTCGTAGCA 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0113437 1 1 5 137 3L 22753327 22770215 ACAATGTGGATCAGACGGG 59 22770316 22770334 TGGCCTCTGTCCATTTGAG 59 NA Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 3 2 2 89 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216888 216907 CATTGGCCGTACAATAATGC 58 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568 3 1 2 139 3R 340834 348720 CTATATTGGCGCTGCACAC 59 340713 340733 CAGAGCTGATTGTGAATTCCA 58 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 3 2 3 80 3R 464124 464276 TAAGCCTACAGGCAAACCA 59 464062 464083 GTGGTGGACATATACTGATCCA 59 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 2 3 3 95 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526040 526889 CATGGTCGCTCATAACACTG 59 NA Drosophila melanogaster 61 Hph FBgn0086689 FBtr0078782,FBtr0078781,FBtr0078780 2 3 3 80 3R 1092745 1092854 GACCAATCAGATTGACTCTGTG 59 1092895 1092913 TCCCTGATGTGGTAGTTGC 59 NA Drosophila melanogaster 61 CG31550 FBgn0051550 FBtr0113409 1 1 3 201 3R 1312414 1312432 CTGGAGGCTATCCAGATGC 59 1312597 1313565 TAAAGAAACCTTGTGGCGG 58 NA DesignRelaxed Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091 1 1 3 80 3R 1513081 1522757 GCTACACGAAGTTGTCTGTG 59 1522800 1522818 GATGACTGAACTGCAGCTC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081684 1 2 4 104 3R 2480293 2480311 GAACGTATCAATGCGCCTG 59 2480377 2480941 CATGGATTCATCTGCCATCTG 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 3 4 4 80 3R 2536672 2537235 TCCGATAGTAACTCCAATTCGA 58 2536613 2536631 ATTTGACGTGGAATCGGGT 59 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 1 3 4 168 3R 3100072 3100726 GAGGATATTGCCTCGACCC 59 3099922 3099940 AGCTGATGGCATCGTAGAG 59 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302355,FBtr0302354 2 2 2 96 3R 3322585 3322784 CACAAAGAATTTGTATCCCACC 58 3322510 3322528 ACTGTAACATTCCCGTGAG 57 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 2 1 2 104 3R 3826728 3826817 AACAATTTGGTCCGTGCTG 59 3826642 3826660 TTGTACCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 CG34135 FBgn0083971 FBtr0110905,FBtr0110904 2 2 2 60 3R 4576502 4576522 GAGTGATGTATTTACTGGCGG 59 4576396 4576417 TTGAAGTGAATGATCATGAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 1 2 4 95 3R 4766833 4766853 AATCTGTATGACCTGTTCGTC 57 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 1 4 4 92 3R 4871946 4872260 ATGAACTTGAACCAGGTGC 58 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 Rel FBgn0014018 FBtr0089340,FBtr0089339,FBtr0089341,FBtr0089338 2 4 4 93 3R 4871946 4872261 CATGAACTTGAACCAGGTGC 59 4871872 4871890 ATTGCTGTATACAGGCGGT 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 3 2 3 91 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367653 5367672 GTTATTCCCGTTGTTGTAGC 57 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 3 4 4 95 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401211 5401230 GTTCATCGTTAGCCTATCGG 58 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 3 2 4 97 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515567 5515585 GTATCAGACCCGGACTCAC 59 NA Nonspecific Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 1 2 2 163 3R 5566738 5566758 ATGACTCTGGTCTATCGACAG 58 5566939 5566957 CTTCTTGCCATCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 tws FBgn0004889 FBtr0082186,FBtr0082187 1 2 8 84 3R 5955358 5960548 GCCAGCAAGTAATGGAGAG 58 5955292 5955310 TATGATGTCTGCATCCGTG 57 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 1 5 5 80 3R 6041341 6042794 GGTGGATGAGATATCCGAGC 59 6042836 6042855 TACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0082255 1 1 8 86 3R 6359717 6374337 CATATGATGGACGATGGTGTC 58 6359651 6359669 CTGAGGAATACAATCGCCG 58 NA Drosophila melanogaster 61 CG14693 FBgn0037837 FBtr0082301,FBtr0300078 2 2 3 80 3R 6638917 6639199 CGATGACGATCAGATCGTG 58 6638855 6638877 TCCTCACAGAATATGGTATCCAG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 1 3 7 103 3R 6692326 6692344 GAGACCAAGTACGACTCGG 59 6689538 6692261 CGTATACGTTCTGGTATGCTG 58 NA Drosophila melanogaster 61 CG6608 FBgn0037852 FBtr0082333,FBtr0082334 2 2 2 277 3R 6706822 6707298 GGAGCATGATACTTAAATGCC 57 6706565 6706583 GATCTTTAGCACGTCCAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082396 2 1 3 161 3R 7279530 7283315 GATGATGGGCTATAGTCAGCA 59 7279389 7279407 GGCATGTACGAGTGATGGA 59 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 1 2 3 116 3R 7777497 7777515 AAGAGATTGCAGCCATTGC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479 1 2 3 116 3R 7777497 7777515 AAGAGATTGCAGCCATTGC 59 7777951 7778371 CAGCTAAACCCAAGTTGCC 59 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082542 3 1 3 106 3R 7922729 7932872 TTTGGGATACAAGTAGTCACCT 58 7932939 7932957 GTCGTAAGCTGTCCCTCAG 59 NA Drosophila melanogaster 61 CG5196 FBgn0038039 FBtr0082585,FBtr0082584 2 2 2 90 3R 8235153 8236006 CATCCCAAGGATCCCAAGG 59 8236060 8236078 ACTTGCGACAATGATGGGA 59 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 2 2 2 82 3R 9093474 9093559 GATATGAGCGTTCGATCCG 58 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 3 5 5 138 3R 9476209 9476539 CAACAAGGGTGACTTTGAGC 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 3 3 3 98 3R 9485362 9486071 TGGTGAAGAGATCACCGAG 58 9485282 9485301 TTCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 2 8 8 82 3R 9487884 9487905 AATTCGAAGACTATCGTGATGC 59 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0082846,FBtr0112939,FBtr0082847 2 3 5 81 3R 9522598 9522616 ATCAGTGTTACCCGTTTGC 58 9522055 9522556 GTCGTAGTTTGTATCTATCCGG 58 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 2 3 3 73 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536315 9536333 TGACATTCGCCTTCTCCAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 foxo FBgn0038197 FBtr0082887,FBtr0082886 1 2 5 80 3R 9892808 9892826 GTGGATGGTCCAGAATGTG 58 9892869 9905081 TGACGTATGGAGTTCTTCCA 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 3 5 5 80 3R 10090933 10090954 ATAACCTTGTAGTTGATGCCAC 58 10090814 10090892 TCGAATAGCAATTCGGCTC 58 NA Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 3 2 2 100 3R 10132889 10132909 AAGAACCTGGAGAAGATCGAG 59 10132743 10132827 ATGTGACCCAGATGGAAGG 59 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 2 2 2 80 3R 11040077 11040155 AACGATACTGATCAGGCGA 58 11040199 11040217 CTCGACGAAGAAGTACCGT 59 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 1 7 7 80 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626019 11626201 GCATCACAGTGTAAGACTCC 58 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083215,FBtr0100595 1 2 3 190 3R 11827113 11827476 CAATTCGAGACGCTTGAGC 59 11827630 11827901 GCTTGCGTTTCTGAATGGT 59 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233 3 1 6 98 3R 11900211 11900229 GATCGGGAGTCATCTGTGG 59 11899116 11900151 CTCGGATAGCTCATCATCCTC 59 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411,FBtr0300610 3 2 2 185 3R 13065431 13065449 CCAAGGTCTTTCAGTTCCC 58 13064754 13065203 GCTTCTCCGGAAATTCCAC 58 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 3 4 4 107 3R 13533849 13533868 TCTCAATATTCGCCGTACCC 59 13533697 13533779 ATTCGGTTCGGGATACTGG 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 1 4 7 112 3R 13997412 14001059 TCCGCTAAACGAGAAGACC 59 14001135 14001153 TGAACTTGAGGTCGCTGAG 59 NA Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0083586 3 1 2 84 3R 14191319 14191401 CAGATGTGACTGAGAAGTTAGC 58 14191256 14191274 ATTGAACGAGTGCTTCTGG 58 NA Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 2 2 2 92 3R 14197164 14197468 GAACACAATTCTGGATTCCCTG 59 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 CG31122 FBgn0051122 FBtr0301432,FBtr0083653 3 2 2 82 3R 14234395 14234413 GGAGAACCTCAATCTGGAC 57 14234153 14234352 CGTAGATGAATTGATTGAGCAC 58 NA Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 2 2 2 93 3R 14509014 14509033 CTTCTGTCCTATGTTGCAGC 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 1 1 1 81 3R 14804366 14804387 GGTAATCTCATCAAGAGCATGG 59 14804231 14804249 CATCGGAAATGGTGACCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0083805,FBtr0083806 3 2 3 102 3R 15464753 15464771 AAGGACCAGATCTGGTTCG 59 15464140 15464633 TTCCTGGAATCTCCTTCATGG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0083787,FBtr0301380,FBtr0301379 1 5 7 125 3R 15579569 15579982 AATAAATGGCACAGATGGTCC 58 15586012 15586030 TCATCCGTCCACTGTTCAC 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 3 2 3 117 3R 15677633 15677757 CCCTGGAGAACTATGTAAACG 58 15677833 15677854 AAGTTATCGTAGTTGATCACCC 58 NA Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 3 2 2 81 3R 16114873 16114959 CATGGCGGATATTACGCTG 58 16115004 16115022 TACGTAGACGAAGCTTCCG 59 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787 3 1 2 100 3R 16122131 16122149 AACTTCAATGTGCCAACGG 59 16122208 16122828 GCTTCTTCATCTCTAAGATCTGTG 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 2 4 8 89 3R 16143994 16144706 GAATCTCCTACAAAGAATCGCA 58 16145293 16145311 TTGAGTTTAGCGGCATCAG 58 NA Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 2 2 2 82 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401269 16401288 ATAAGATTTCCGTGACGCAC 58 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 1 4 4 126 3R 16450497 16450515 ATCGATAGCGTACCAGCAC 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 RpS30 FBgn0038834 FBtr0083969,FBtr0083970 1 2 2 67 3R 16676607 16676625 GACTAGAGACCATCGAGGC 59 16676656 16676761 CAGTTGGTTCTTGACTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 3 2 4 121 3R 16894631 16894649 AAGGACAAGACGCTGATCC 59 16894734 16896456 GAGAGGTCGTCCTTGATCC 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 2 5 16 164 3R 17004777 17004798 CTTATGAACTCCATGAAGGTGG 58 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 1 2 3 167 3R 17105827 17105845 GGAGGAGTTCGAGATCCTC 58 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0299852 3 1 2 81 3R 17594572 17594591 GAGGAGAATCCTGACTTGGT 58 17594635 17594739 CCCGACCAACTTTATACGC 58 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 3 2 5 120 3R 17897750 17900175 TGCTGATCATAGCGTAGGC 59 17900257 17900277 CTGTATCTCAATGAAACCCGC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 2 5 5 88 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300006 3 2 3 80 3R 17957959 17958390 ACCAATCTATTTGAGGAGATGC 58 17958430 17958449 CAATTCGGTTATCTCACGCA 58 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084425 2 1 3 91 3R 19344241 19344259 ACAATTGTGCCGAATAGGC 58 19341198 19344186 AAATTGCGAGATCTGCAGC 59 NA Drosophila melanogaster 61 CG10164 FBgn0039088 FBtr0084417,FBtr0300585 2 2 2 276 3R 19382197 19382216 CTCCTCCTACTATCCACCAC 58 19381720 19381958 TCTTCTTCATGACGGCTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0100518,FBtr0100519,FBtr0100516 2 4 7 123 3R 19982894 19982994 AGTTTATATCGTGTCGCCC 57 19982789 19982808 TTGTCAGAAGGAACTGTCTG 57 NA Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 2 2 2 85 3R 20313318 20314187 GTGATCAGATCGATTTGAAGCA 59 20314233 20314251 ATAGTACTCACGCAGGTCG 59 NA Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 2 2 2 92 3R 20570004 20570514 TTGTTGAAAGCGGAAACGT 58 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084699,FBtr0084700 2 2 3 92 3R 20646482 20646831 CAGATGAAGATCATGGAGTCC 58 20646883 20646903 CTTACGATCAGTAACGTCTCC 58 NA Drosophila melanogaster 61 CG33096 FBgn0053096 FBtr0301975,FBtr0114464,FBtr0301976 2 3 3 97 3R 20924347 20924365 GCTGTGATACTCCATTCGC 58 20924425 20924505 TTATCAATGCTGGGAAAGGC 58 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 2 6 6 85 3R 20960337 20960422 GATTCTTTCGGGAGAACCA 57 20960471 20960489 CTTCTGACTGATCGGTAGC 57 NA Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 2 2 2 82 3R 21505847 21505865 TTCCTTAGTTCGGTCACCC 59 21505720 21505801 AAGCATGCCAACACTTCTG 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 2 2 7 115 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535132 21535150 TCTTCTCATCCGATCCGTC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 1 4 7 85 3R 21580125 21580143 CATTCGATTCGTTTGCGAC 58 21575103 21580078 AAGTGGCCTCTATAAACTTGC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301467,FBtr0301470,FBtr0301469,FBtr0301471 2 4 7 85 3R 21580124 21580142 ATTCGATTCGTTTGCGACG 59 21575102 21580078 CAAGTGGCCTCTATAAACTTGC 59 NA Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 1 2 2 80 3R 22301120 22301202 CCAAGGATTAATGCTTCGAC 57 22301059 22301078 TTCTTGTTCTCCAACTGACC 57 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 3 2 10 88 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424360 22424379 TTGATCACATCTTGTGCCTC 58 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 3 2 3 172 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687850 22687868 AAATCCGAGTGGAGACCAC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 3 12 12 161 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891607 22891629 GAAGGGATCTTGAAGGAATTCTG 59 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 3 3 3 80 3R 22981219 22981298 AAACCCAGTGTGCTTATTGG 58 22981341 22981359 ATTGTTATCCGCCATGGTG 58 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 1 3 3 80 3R 22981782 22981868 GCCTACGATAGAGGCTTGG 59 22981909 22981930 GAAGTTGTACAGCTGATTCTCC 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 2 5 5 80 3R 23392252 23392335 CCTTGGCAGTATCATCAACG 59 23392191 23392211 AGTGGCAATAGGACCTTAACC 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 3 6 6 86 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428547 24428565 GTTGGTCATTCTGCTTGGG 59 NA Nonspecific Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 1 2 3 112 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652797 24652815 TATCCTTGACGAAGCACAC 57 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 2 7 13 120 3R 24726634 24726652 AAATACCGCTACAGGGACG 59 24726736 24745223 GCTTTGCTGTCTTAGCCTG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085443 1 1 5 84 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423185 25423507 ATGCATACAGTTCACATGGTC 58 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0099989 1 1 4 158 3R 25599394 25599412 GAGGACAGGGTCAAGATGG 59 25599533 25617123 GTTGCCGAGGATAAGATTGC 59 NA Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 3 2 2 80 3R 25648462 25648548 TGAAATTGTGACAGGATACGTC 58 25648588 25648607 CAATCAGTGAGCATTAGCGT 58 NA Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085495,FBtr0085498,FBtr0085496,FBtr0085499,FBtr0085494 3 5 6 206 3R 25705383 25705401 GGCAGTTACTCTGACTAGC 57 25723060 25723078 TTGTTGAAGCCGATGAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0110860 2 1 2 96 3R 26339622 26339698 AGATAAACCCGTGATTCATGAG 58 26339547 26339567 TCTTATAGCTTCTGATGCGTC 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 8 13 153 3R 26420665 26420683 GATTGTAGCTCGCAATCCG 59 26419562 26420549 AGTAGAGTTTCTGGTCGGTG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 2 5 13 99 3R 26419560 26419843 GACGCCTAGAAACTCTACTCC 59 26419481 26419499 GACCTTGACAATGTGCTCC 58 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 1 3 3 82 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043631 27043649 CAATGGTCGCAAGTACTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 2 4 4 114 3R 27567455 27567473 CAACGTGAAGAACGTGTCC 59 27567550 27567646 GTTGAGCACAATCACCTGAG 59 NA Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 3 2 2 80 3R 27611082 27611163 CATACACAGTGTCTGGCCT 59 27611205 27611225 TCGTCTCAACGTTTGTTTGAC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 1 6 7 140 4 258146 258164 CACCTCGACACTGTATCAG 57 261022 261286 GAGGCATATAGCTTTCGGT 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 1 5 6 198 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 3 5 6 199 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322902 322923 CCAACTGAAGAAATGATTTGCG 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 1 6 7 81 4 470584 470875 AATGGAACGCGGTTAACTC 58 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 1 3 5 115 4 886473 886570 CACTTGGCAATAACCGCTC 59 886376 886396 GTATATCGGATGATAGGCCGA 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089247 1 1 3 80 4 906510 907601 ACAGGGACAAGAATGGAGG 59 906448 906469 TGCTATAGAATGGATTGTCACC 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246 3 1 3 80 4 906428 906449 CAATATTGACAGTATGCCGGAC 59 904260 906388 GCCATTGTCTTGAGAACCAG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 2 6 6 100 4 974715 974733 AGAAATCCGGTGGTCACAG 59 974513 974653 TGCGAATGCAATTCTTGAGAG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 2 2 6 98 4 978509 978643 GATTAGTGCCAGGTACTCG 57 978429 978447 GTCTGCAATTCAAGTCGTG 57 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223 2 2 5 80 4 1040636 1042882 CCATGTGTTCTAACGAAACTG 57 1040576 1040595 GGTTTCTCCTCCTAAAGGTG 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 2 6 7 81 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080447 1081041 GTCTGCTTGATGGAACCTG 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 3 5 8 94 4 1128885 1128905 CGATACGTCTATGCTTTACGA 57 1128961 1129108 AACCTGTTCCAATGGAAGG 57 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 2 5 5 81 4 1230678 1230696 CACCAAGTAGCTCAAGTGG 58 1230563 1230634 CTATTCTGCCCTGTAACTGG 57 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 2 4 8 80 X 165640 166467 CAGCGATGTTGATTACACCA 58 165579 165599 TTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100579 2 2 8 128 X 165180 165200 CTATGTACCAGTCGGTAATGG 57 163389 163472 CCATTCTCCACAGATCAAGG 58 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 1 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089724,FBtr0089723 2 2 4 88 X 516313 516331 AAACCTAGGCGAGAAATGC 58 516382 516488 AAGCTGCAATCCTGATATGC 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 1 5 6 86 X 640139 640558 AAGAAGCGAGACGACTCAC 59 640606 640626 CAGTATGTGATAGCTGACCGT 59 NA Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 1 2 2 87 X 971123 971253 CAATCGAACAGCCATGGAC 59 971054 971072 ATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 2 2 3 97 X 1924315 1924334 CCAAAGACAATCCTCTGGAG 58 1923949 1924258 GTTGATCAAATCATCTGGATCC 57 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091962 1 2 8 173 X 2380225 2380247 CCAGATATGTGATTTAAGCAGGG 59 2378777 2380092 GTTGGATCGTTGGTGTCTC 58 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 2 4 4 178 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816600 2816618 GTTGAATCCAGGTCCACCT 59 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 1 3 5 83 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 1 4 4 80 X 4619217 4620278 CGACAGTTTCGGTTACATCTC 59 4620320 4620338 TTGAGCGGATAGCGTATCG 59 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 2 3 3 215 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616524 6616542 CAGAAAGATACGCCACGAG 58 NA DesignRelaxed Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 3 5 6 107 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0300880,FBtr0071042 1 2 2 80 X 6736603 6736621 GAACAACAATGGATCCGCC 59 6735973 6736562 GTCATTGACATGTCCCTTATGG 59 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091673 3 2 3 60 X 6771077 6771096 TGTTACCTTTACCAAACCCA 57 6771119 6771137 TATTTCAGCTCCCGAACCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 1 2 2 80 X 6868809 6868828 TACGTGTTCATCTGGTTCTG 57 6868670 6868766 AAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 1 2 2 60 X 6964928 6964948 GGAAATCCCTCAGATACTTCC 57 6965437 6965456 AATTCCGGTACGTAGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 1 7 21 192 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 1 7 21 192 X 6982730 6982748 GCGAAAGACACTCACTGAC 58 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572 1 1 2 87 X 6978688 6978707 GTTCCAGCAAATGTACCACC 59 6975076 6978638 CCATAGCTCCGTCTCTGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 3 3 3 60 X 8466511 8466530 CAGCTGTAGCTCCAATTGTC 59 8466319 8466338 ACCTTGTTCAGTTCATTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 1 2 2 106 X 8763932 8764018 AGTTCCAGTGATGACGAGC 59 8764088 8764106 CTCTTTCGCTTGAGTTGCG 59 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381 2 1 2 106 X 9623896 9624345 AAACAACTATCAGTGAGCCTG 58 9624413 9624431 CACTTGGGTTTAGGGTTCG 58 NA InUTR Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0112970 2 1 2 80 X 9873017 9873097 ATCCACTTTATTTGGACCTGGA 59 9872958 9872977 CCCAGAAGACCAGAGATCAG 59 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300512 2 1 8 121 X 10180572 10180592 CCCTTGTCCTCAATTGTATCC 58 10173214 10180490 TGTTCCATCATCTTGACGAC 58 NA Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 1 2 2 80 X 10301262 10301282 AATTACTGTGGAGAGTTCGAC 57 10301323 10301407 TTTCAGGATCTGGAATGAGC 57 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 3 4 4 136 X 10672153 10672255 ATATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 2 4 4 117 X 10676326 10676423 AGTACAAGCAGGTCTTCCT 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 2 2 2 86 X 10855204 10855310 CTTCCGCAATGACCAACTG 59 10855360 10855378 TTGACCAGTTCCGCATAGG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 2 5 5 151 X 11027593 11027611 TAATGGAAAGGTGCAGGAC 57 11027384 11027478 GAAGATCGAAGACCTTGCC 58 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0090002 1 1 3 81 X 11592561 11592580 TCTAGTCGTTGATCCTTCGC 59 11592624 11593367 TTGCTCGAACAGCATTTGG 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 2 3 5 197 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607537 11607555 ACTCGAACTGTTTGGTGCT 59 NA InUTR Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 1 1 1 267 X 11626557 11626575 ACCCTGTTGCTCTACATGG 59 11621318 11621336 GTGCTTGTAGAACTGCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 cac FBgn0005563 FBtr0100303,FBtr0100302 2 2 10 90 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848298 11856053 ACGTTGATTGAGTTCGAATCC 59 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 2 2 2 123 X 12370016 12370191 TCAATATGATCAGAGGTGGCA 59 12370276 12370294 TTGATTACACTCTCGCCGA 58 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 2 2 5 87 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483124 12483143 ACGAATCACTAACTGGTGTG 58 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 1 6 6 83 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545581 ATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451,FBtr0301449,FBtr0112980 3 3 5 82 X 13539829 13543422 GTAATTTCGGCATGAGAATGAC 58 13543465 13543483 CGATGGTATGCGAAATCCT 57 NA Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 3 2 2 81 X 13795568 13795586 TACTACAAGACGGGAGCCT 59 13779523 13795523 GAGAGGACCACCTTATGGG 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 1 2 8 120 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820885 14820906 CAATATGGCTCTCAAATGTCCT 58 NA Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 1 1 1 82 X 14802755 14802773 GAATCCCGACTGGAGAGTG 59 14802296 14802314 GTCCAAAGAATAGTGCCGG 58 NA DesignNoJunction Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 3 4 4 108 X 15229292 15229393 ATTCCAGAATGCTGTCAACAG 59 15229463 15229481 CTCGTAGTGCTCCTTGTCC 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 2 3 4 91 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 1 6 6 80 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231132 TTGTCCACCATTGTCTTCC 57 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300034 2 2 4 121 X 16603927 16603945 GGGCTACTACAAAGTGGAG 57 16604102 16604246 CCACCAGATACTTTGAGGG 57 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 3 4 4 80 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198159 17198177 GATCTTCATCGAAGGCAGC 58 NA Nonspecific Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 3 2 6 80 X 17796055 17796077 CAAGTCGAGATCAATACGATAGC 59 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 3 3 7 93 X 18003567 18003585 GCGAAGAGTATTACGAGCG 58 18000954 18003511 AGATCGTTGATCTCCCAGTC 59 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 1 2 3 116 X 19157976 19163295 ACCTGCATTCCACTACCAC 59 19163375 19163393 TTCTACTCGTCCTGTGCAG 59 NA Drosophila melanogaster 61 CG8028 FBgn0031010 FBtr0113005,FBtr0074685 3 2 2 60 X 19173018 19173038 CAGTCTACCTATTTGAGCTGG 58 19171982 19172000 CCAATGGCGATAATGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 pcm FBgn0020261 FBtr0074784 3 1 2 157 X 19380364 19380448 TTGAAATTAAGCCGGCTGC 59 19380157 19380177 GGGCAGTATGTATTCCAAGTC 58 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 1 4 4 80 X 19466332 19466353 CAACAGAAGGAGGTCATTAAGC 59 19466209 19466292 GCTTTGCTCGTACTGTTCAC 59 NA Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 1 2 2 80 X 19601633 19602201 AACCACATATCAATGAAGTCGG 58 19601574 19601592 GTAGTTCGTCTGCATCAGC 58 NA Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 3 2 2 124 X 19601494 19601583 GACGAACTACAATGGAGCG 58 19601388 19601406 TCTTCTTCAGCGTTGTCGA 59 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0070034 3 1 5 81 X 19905590 19907145 GCGCACCTAAGGTAAATGG 59 19905527 19905548 GTAGAGCATATCACATCCATGG 58 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537 3 1 2 149 X 20345368 20345386 CACAACCTGTCGAAGATCG 58 20345024 20345255 GTAGTCCAACGACAGAACG 58 NA Drosophila melanogaster 61 CG33713 FBgn0064116 FBtr0077227,FBtr0091702 1 2 2 60 X 21189740 21189758 AGCAGTCAAACAGCATTGG 59 21189698 21189716 GCCTGCTTGTAGTATCCGT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 1 1 1 60 X 21194163 21194181 ATGTTCAATCGCCAAGTGC 59 21193153 21193174 GGAAGAGTTCGTATTTAACCGG 59 NA DesignNoJunction Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 3 5 8 84 X 21247627 21247645 GCTAATACGCGCCTATCTC 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 tRNA:R2:42Ad FBgn0011958 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:L3:49Fb FBgn0011910 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30239 FBgn0050239 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-286 FBgn0067706 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:357 FBgn0065097 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G764 FBgn0020518 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snRNA:U4atac:82E FBgn0041718 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31573 FBgn0051573 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR11386 FBgn0260447 FBtr0299927 2 1 1 70 X 7791767 7791984 TATGTGCATATTCGTGGCC 58 7791715 7791733 TTATTGCAGCGTGGATGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073627 2 1 3 92 X 11985516 11985613 AGTGCAGTTGATACTTCTAGC 57 11985664 11985685 GCAATTGATTCCTAGACTAAGC 57 NA Drosophila melanogaster 61 CG32857 FBgn0052857 FBtr0070052 2 1 1 76 X 21487143 21488212 TCCTTTGGCCAAATTGCTG 59 21487085 21487103 TCGAGATGGTGACGAAGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 1 5 5 80 X 21473852 21474021 ATCTATGGTCATGGAGCGC 59 21473790 21473808 CGACGTTTGAATGTCCACC 59 NA Drosophila melanogaster 61 r-cup FBgn0031142 FBtr0077269 1 1 1 143 X 20895719 20895827 AATGATATCAAGCGCCTGC 58 20895594 20895612 GTATCCCTCGCACAAACTG 58 NA Drosophila melanogaster 61 CG1324 FBgn0031129 FBtr0077293 2 1 1 83 X 20606740 20606821 GATTAAACGGCGTACGGAC 59 20606675 20606693 TAAGCAGGATCAGTGTCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295,FBtr0300487 2 3 3 112 X 20542781 20542799 CAGAAACCTGGGTTTCAGC 59 20542567 20542708 AACCACGACTTCTACTTTAAGG 58 NA Drosophila melanogaster 61 CG42578 FBgn0260868 FBtr0301566 1 1 1 101 X 20317459 20317477 GCCAACTGGAAACAACGAG 59 20317542 20317560 CTGATGTGTTCTTCCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34331 FBgn0085360 FBtr0301576 1 1 1 60 X 20016562 20016580 ATCGGTCTGTTCCTTGGTC 59 20016601 20016622 GAATATCGGGAACATTCGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32821 FBgn0052821 FBtr0070037 1 1 1 60 X 19804645 19804663 AGACTCAAACGACTCCACC 59 19804505 19804524 TAGAAGACTCCATTGCCACC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Rpp20 FBgn0066304 FBtr0091935 2 1 1 68 X 19638705 19638796 AGACTTTAAGGCCCAGCAG 59 19638828 19638846 TGCAGAAAGATCTCGTGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14210 FBgn0031040 FBtr0074740 2 1 1 116 X 19510428 19510509 GCCCAAGCAGAAATTTAGC 57 19510589 19510607 TCCTTGATCTCCTTGGAGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718 2 1 8 84 X 19398495 19398513 TGCGATTCGTTGTGTTCTC 58 19398561 19400527 TTCCTTCTGCTGGATCGAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 3 1 1 101 X 19072154 19072172 CAAGGCTCCAGAGAAGACC 59 19071994 19072089 CTCTTCTGGGAAGCTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15057 FBgn0030908 FBtr0074582 1 1 1 60 X 18167050 18167068 GACGCAGACAAAGATGGAG 58 18167008 18167026 CATCCAGTATCCACCATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15059 FBgn0030905 FBtr0074585 3 1 2 60 X 18153215 18153235 AGGTCCAAGATAAATCTGTCC 57 18153175 18153193 GTTGGATTGCAGTACTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf8 FBgn0022724 FBtr0074514 3 1 1 82 X 17996725 17996801 CATGTTTCCTTTAATTGCCTGC 59 17996842 17996862 CGAAGTCAAACACCTGATCTG 59 NA Drosophila melanogaster 61 CG8568 FBgn0030841 FBtr0074436 3 1 1 147 X 17345165 17346092 CCGATTCGATCAGAAAGTGTG 59 17345038 17345056 CATCATGACGGGAATGCAG 59 NA Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388,FBtr0111000 3 2 2 86 X 17085336 17085354 TTTGAGTCCGGAGAAGAGG 58 17085400 17085483 GGATTGCTCCATCTATTCATCTC 58 NA Drosophila melanogaster 61 Axs FBgn0000152 FBtr0074372,FBtr0100417 2 2 2 80 X 16576146 16576245 CTCCACGATATCCTGTATCTCG 59 16576087 16576105 GTAGTTCCGGATGTCCTCG 59 NA Drosophila melanogaster 61 CG9723 FBgn0030768 FBtr0074376 1 1 1 80 X 16548218 16548238 TTTGATTCTGATCACCTACCG 57 16548091 16548176 CGATAGCAGATCAGGAACG 57 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 1 4 4 83 X 16193687 16193705 CAGTGGCTTGATCTTGTGC 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 tay FBgn0260938 FBtr0074167 1 1 1 80 X 15778401 15778487 GAGGATCTTGAGTTTGCCA 57 15778339 15778357 GGTACAAGTTAGCTCGTCC 57 NA Drosophila melanogaster 61 CG15030 FBgn0030621 FBtr0074000 2 1 1 61 X 15109830 15109848 TACGATTTGGAGTGCTCCC 59 15109873 15109891 CAAATTCAGGAGCGGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 3 2 2 81 X 13795568 13795586 TACTACAAGACGGGAGCCT 59 13779523 13795523 GAGAGGACCACCTTATGGG 58 NA Drosophila melanogaster 61 CG11063 FBgn0030530 FBtr0073834 2 1 1 81 X 13721663 13721682 CAAGATCGAAGAGCTCACAC 58 13721532 13721622 GTGACAAATGCCAAAGTATTCG 58 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0073808,FBtr0301451,FBtr0301450,FBtr0301449,FBtr0112980 1 5 5 83 X 13549163 13549182 ACCATGGTCATTGAGATCGA 58 13549226 13549344 ATTGCGTTCCTTCAAGATTCC 59 NA Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 3 2 2 60 X 13200967 13200986 ATCGATCCAAGAAGGTAGGC 59 13201006 13201027 TCTAGTTTGAGATTTCCCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4645 FBgn0030435 FBtr0073692 1 1 1 126 X 12805131 12805450 CATTCTCTGGGTGATCAATATCTC 59 12805535 12805553 GAACAGCGAGAATTGCGAG 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 2 2 5 87 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483124 12483143 ACGAATCACTAACTGGTGTG 58 NA Drosophila melanogaster 61 ATP7 FBgn0030343 FBtr0273257 3 1 1 80 X 11756035 11756124 CCCACAAGGTAAAGACTGTG 58 11756166 11756185 AGAGGGTAACCTTACTGGTC 58 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073455 1 1 2 267 X 11250239 11250257 TTTCCCTGGCTTAATCCCG 59 11250554 11250572 GAAATCGGCGTCCATTGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15306 FBgn0030191 FBtr0071471 2 1 1 83 X 10225511 10225585 ACTTTCTTTGGCTTGTAGACAC 59 10225449 10225468 GAATTATGCGTGACGGTCAC 59 NA InUTR Drosophila melanogaster 61 Gr9a FBgn0052693 FBtr0071420 3 1 1 134 X 9956459 9956539 TGTCCAAGTCCAAACACCT 59 9956635 9956655 GATAAATTCCGCAGACATCGA 58 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 1 2 2 92 X 9783063 9783081 CATATACGACACAAGCGCG 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381,FBtr0273354 1 2 2 80 X 9624701 9647043 AGTTAATCCGGATCATCCCA 58 9647083 9647104 GATTTGTTGGATAGCTTGTTGC 58 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 2 3 3 92 X 9048262 9048419 CTTGCAGGAAGCATCTGAG 58 9048188 9048206 TTAGGCATGATTGTCACGC 58 NA DesignNoJunction Drosophila melanogaster 61 fh FBgn0030092 FBtr0071348 2 1 1 113 X 9042771 9042789 ACTACTTCGAGGAGCTGAC 58 9042607 9042625 TGATCACATAGGTGCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Rbm13 FBgn0030067 FBtr0071255 3 1 1 126 X 8796837 8797247 ATATTGAGGAGACCAAAGTGC 58 8797335 8797353 TCATACTCGTACTCCAGCT 57 NA Drosophila melanogaster 61 CG1789 FBgn0030063 FBtr0071251 3 1 1 198 X 8615045 8615064 TCAAATTTGACGAAGACGGA 57 8615349 8615367 TGAATCTTCTGCTGGACGA 58 NA DesignNoJunction Drosophila melanogaster 61 PIP82 FBgn0024943 FBtr0071235 1 1 1 89 X 8419944 8419962 AAATCCTGCAGCATCAACG 59 8419798 8419891 AGCTATTCTCTTCGTCGCT 58 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 2 1 2 130 X 8353355 8353373 CAGATGGATGCATCCAGTG 58 8353189 8353261 AATTGTGTAGCCATCCAGG 57 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 2 3 3 91 X 7991097 7991203 ATCGAGAGGATGATCCCAC 58 7991024 7991042 CGGATGGCTGAATATGTCG 58 NA Drosophila melanogaster 61 CG15036 FBgn0040922 FBtr0071060 2 1 1 60 X 7318826 7318844 TGAGGCAATCCATAAAGCA 57 7318784 7318803 CCAAGGCTTAAACACTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bou FBgn0261284 FBtr0071004 2 1 1 60 X 6880913 6880931 ACTATGTGCGAAACAAGGG 58 6880952 6880973 GTATCACAAGTGTAAATGCAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atx-1 FBgn0029907 FBtr0299814 1 1 1 81 X 6715126 6715144 ATGAAGGACCTCTTCTGGC 59 6715189 6715262 AATCCGTGGAATGGTAGGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14441 FBgn0029895 FBtr0070959 2 1 1 92 X 6603918 6606318 GCCAACGTCAAGATTAGCA 58 6606374 6606392 TTTCTTAAACACGCAGGCC 59 NA Drosophila melanogaster 61 CG3224 FBgn0029885 FBtr0070992 1 1 1 167 X 6555394 6555413 AAACCCTCGTTTCTTAACCA 57 6555186 6555204 CGTTTCGATACCATTCCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 1 2 2 89 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492628 6492716 ACCAAACATCGTGAAGCTC 58 NA Drosophila melanogaster 61 CG3847 FBgn0029867 FBtr0070905 2 1 1 60 X 6242405 6242423 AAGAAGGTGGTCGTCAAGG 59 6242447 6242465 AGACGACGGTGAAGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wuho FBgn0029857 FBtr0070897 2 1 1 60 X 6182268 6182289 CTGCAGATATTCAAGGAGATCG 58 6182310 6182328 GGGATGTATGGCCTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grip FBgn0029830 FBtr0070865 3 1 1 91 X 5880181 5880199 GTGGCGTCTTCATCAACAG 59 5880252 5880339 TTCATTTACCTGCATGATCCG 58 NA Drosophila melanogaster 61 CG3016 FBgn0029819 FBtr0070828 1 1 1 109 X 5771718 5771737 GAATCTTTACCGGCTTCTGG 58 5771570 5771646 TGTAGTACCACCGATGTGC 59 NA Drosophila melanogaster 61 CG6978 FBgn0029727 FBtr0070715 2 1 1 60 X 4678493 4678511 ATGGTGACTTCGAGTGGAG 59 4678532 4678553 CCATAGAAGAAGCTAGAAAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLH4C FBgn0011277 FBtr0070691 1 1 1 150 X 4540465 4541347 TAACTGCTCATTCAGCAGC 58 4540333 4540352 AGATAGTAGCGACTAAGCGA 57 NA InUTR Drosophila melanogaster 61 Parg FBgn0023216 FBtr0070585 1 1 1 132 X 3564608 3564696 CTTTAACAGGCTTTACCAATCG 58 3564497 3564515 AACAAAGGTTACCACACCG 58 NA Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070586 3 1 2 81 X 3467445 3467463 AATTCCCTGCTAAATGCCG 58 3467318 3467403 TATTATCGGGCGTATTCTTCAG 58 NA Drosophila melanogaster 61 CG14422 FBgn0029645 FBtr0070555 1 1 1 160 X 2837515 2837533 ATCTTCTACGGAGCTCTGC 59 2837793 2837811 ATAAGCTGCTGTAAGCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32793 FBgn0052793 FBtr0070550 2 1 1 277 X 2823947 2823965 AACCATGACCAAGTTCGTG 58 2824350 2824368 GCGGGTGGATGATAAAGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14417 FBgn0040353 FBtr0070566 3 1 1 60 X 2770090 2770109 TCGGAGTTTATCCGTACACC 59 2770049 2770067 TTCGGAAGTACTGCATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302447 2 1 4 82 X 2475136 2477033 CCGTTTCAAGATCTTCTTTACC 57 2477074 2477094 GTGCAATCATCTTGTACTCCA 58 NA InUTR Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0112811,FBtr0091965,FBtr0091966,FBtr0091962,FBtr0070451,FBtr0091963,FBtr0091964 1 8 8 80 X 2378114 2378380 CCATTACCATAACCAAGAAAGACC 59 2378057 2378078 CGTACTCCTCAAATGTAACGTG 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458,FBtr0114528,FBtr0070457 2 3 3 128 X 2340769 2340790 CCAGAACTCCTTATATCCACTG 57 2340598 2340680 GGTTTGTTCTCATCCTCCG 58 NA Drosophila melanogaster 61 CG12496 FBgn0040385 FBtr0070462 1 1 1 63 X 2304434 2304452 TCCGTTGGATCCCTTTCTG 59 2304389 2304407 TTTGTTAACTCCTGCACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kz FBgn0001330 FBtr0070419 3 1 1 81 X 2132203 2132283 GAATAGCGATCCTCACTTCCT 59 2132142 2132160 CCATAAAGGCGTCAGTTCG 59 NA Drosophila melanogaster 61 CG16903 FBgn0040394 FBtr0070434 2 1 1 93 X 1972798 1972873 CAGGAAGTCGAAATCCTCG 58 1972723 1972743 GCCATCACCTAGATTATTGCT 58 NA Drosophila melanogaster 61 CG4290 FBgn0025625 FBtr0070340 3 1 1 80 X 1954180 1954198 GAAAGTCTACCGCGAAGTG 58 1954048 1954136 TTGGTCTCCATAACCTGGT 57 NA Drosophila melanogaster 61 dor FBgn0000482 FBtr0070269 1 1 1 81 X 1561637 1561717 TTCGCATAGCTTATCACGAC 58 1561761 1561779 CGTAAGAGATCGCACTCCT 59 NA Drosophila melanogaster 61 CG14787 FBgn0027793 FBtr0070298 1 1 1 71 X 1355426 1355444 AATAGGAGTAGGCGTACCG 58 1355373 1355391 ATGGATGTACTGCTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3719 FBgn0024986 FBtr0070233 2 1 1 84 X 1274226 1274244 AGAAGTACCTGTCGCAGTC 59 1273395 1274180 CTGTTGATCACCTTCTGATCG 58 NA Drosophila melanogaster 61 CG18091 FBgn0024368 FBtr0070242 2 1 1 120 X 1202721 1202739 ACAGAATAGGCTCAGAGCC 58 1202619 1202637 GAAGTTGGCCAAGACAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11384 FBgn0040363 FBtr0070251 3 1 1 60 X 1069113 1069134 GGATCTACGCCTATATGTACGA 58 1069074 1069092 TGATAGTAGTCGAGGACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3021 FBgn0040337 FBtr0070173 3 1 1 92 X 921569 921679 TCATACAGGAGTACATCACTTCC 59 921731 921749 TCCATTGATGGATGCCCTC 59 NA Drosophila melanogaster 61 TfIIA-S-2 FBgn0040338 FBtr0070184 3 1 1 212 X 905422 905522 GGATGAGATGATGGAGAGGG 59 905229 905248 TTCAAGGAATGCTGATCCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG16989 FBgn0025621 FBtr0070140 3 1 1 60 X 689857 689877 CTGGTATCTTATTTCCCACCC 57 689898 689917 CGTACCTTGAAGTTAGCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tw FBgn0086368 FBtr0070139 2 1 1 81 X 679034 679128 AAAGAGGCCAATTGGAACTG 58 679172 679190 CGGTGACCTTATAGAAGCG 57 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 2 2 4 126 X 227684 227705 CACTTGCATCAAGTAACTTAGC 58 211943 227598 TCCTCTTCCGGAAATTCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Su(Ste):CR42418 FBgn0259849 FBtr0300146 2 1 1 61 U 7084341 7084359 AGATCTACTGCCCACTCTG 58 7084298 7084317 TCCGTCCATCTGTCTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp1-Y1 FBgn0261399 FBtr0302342 3 1 1 60 U 8549803 8549822 GGCGACTATGTGGATAGAGG 59 8549845 8549863 TATATGCCAGCAAGAGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40936 FBgn0085539 FBtr0302345 3 1 1 167 U 8041282 8041361 GCGATCTGAAATAGAACGCA 58 8041489 8041509 CGCCAGTTAGTGTCATTAAGC 59 NA Drosophila melanogaster 61 CG40188 FBgn0058188 FBtr0302217 3 1 1 134 U 2232706 2232865 TTAGAGCTGGGAACGTCAC 59 2232963 2232981 CAACTGCATGCAATGACGT 59 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 1 4 4 80 4 714052 714072 ATACCAACGATGAGGAGTACG 59 713455 714012 CATGAGGTTGAATTTCCTCGG 59 NA Drosophila melanogaster 61 Thd1 FBgn0026869 FBtr0089106 1 1 1 81 4 570234 570347 TCGTTATAGTCGGGATAAATCC 57 570174 570192 TTCCAGAAGTGATTGCCTG 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1275 FBgn0086663 FBtr0091602 2 1 1 60 3R 5604182 5604200 GTGGCCAAAGTAAGAGCTG 58 5604224 5604242 GCTGAACCAAATCCATTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31541 FBgn0037309 FBtr0078783 1 1 1 60 3R 1094815 1094835 AACTTTGCTGTTAACTCGACC 59 1094857 1094875 GACCGAAGTTGTAGTAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 1 2 2 87 3R 27617575 27617593 GATCCATTTGTTGCCACCC 59 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 CG2126 FBgn0039876 FBtr0085857 2 1 1 80 3R 27601402 27601478 GGTTGATCTATTACTCCTTTCCG 58 27601344 27601363 CCAGTTTGAGGGAATAGTGG 58 NA Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 1 2 2 61 3R 27421797 27421815 CAACTCCTACCTGAAGGGC 59 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31007 FBgn0051007 FBtr0085747 3 1 1 61 3R 26817779 26817797 CAACAGGAGGGATCCTTGG 59 26817736 26817755 TCCACTAGTTGAGGTTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721 2 1 2 128 3R 26571772 26571790 ATGAGCTTCGACTTTACGC 58 26571581 26571681 GATGGTGTATGGATTGCAGG 58 NA Drosophila melanogaster 61 Pka-C2 FBgn0000274 FBtr0085727 2 1 1 80 3R 26521700 26521720 GATGCCCTCATACTTTACGTC 58 26521578 26521660 TTTCCTAAACGCTTTGAGGTG 59 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 1 5 5 80 3R 26212314 26213202 CTATGGAGATTTCAAGTGCTCC 59 26212255 26212273 CCCTTTATGCAGGCATCCT 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089425,FBtr0089422,FBtr0089424 2 3 4 61 3R 26034369 26034646 CGACAAAGATGGCTATCGG 58 26034326 26034344 GAAGTCATCGGGATCCGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RpS28a FBgn0039739 FBtr0085601 3 1 1 90 3R 25848278 25848296 GTGGTCGAGATCCTTGGAC 59 25848206 25848225 GAATAATCTGGCGGCTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7912 FBgn0039736 FBtr0085605 2 1 1 92 3R 25833316 25833337 TACTTCTTCGGTCACATAACAC 58 25833171 25833263 TTTCAGTTGCCTCATGAGC 58 NA Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085549 3 2 3 196 3R 25823901 25823920 CACAGAGACTATCCCGATCC 59 25824147 25824165 CCTTCTTCCGGTACTCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42557 FBgn0260759 FBtr0301256 2 1 1 60 3R 25759288 25759364 TTTAAAGCTACTTGAGCGGA 57 25759386 25759405 GTTGTCCAACAACTTGTTGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cog7 FBgn0051040 FBtr0085509 3 1 1 110 3R 25758183 25758260 CGCAATGATCTAAAGGGAGTC 58 25758093 25758111 GAAGTCCTCCACTTGGGTC 59 NA Drosophila melanogaster 61 Jon99Ci FBgn0003358 FBtr0085511 3 1 1 100 3R 25751669 25751687 CGGATCCATAATCGGACAC 57 25751530 25751548 GTTCGTTGTAGTTGACGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089927 1 1 2 87 3R 25684431 25684505 ATGACAATGATCGTGGCGA 59 25684362 25684380 TGATTAGCGTCCTGTGGAG 59 NA Drosophila melanogaster 61 Vps16B FBgn0039702 FBtr0085533 3 1 1 60 3R 25641622 25641642 CAGTTTCATGGCATTCTGAGG 59 25641582 25641603 TCAGGTAACTCAGATACTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps16B FBgn0039702 FBtr0085533 2 1 1 60 3R 25641584 25641604 GGAGCAGTATCTGAGTTACCT 58 25641544 25641562 CAGTAGCTCAATATGGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085541,FBtr0085540,FBtr0085539 3 3 3 60 3R 25573828 25573846 GGAGAAGTCGGAGAAGCTG 59 25573786 25573804 ATAGCTCTTGACCACGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp99d FBgn0039684 FBtr0085455 3 1 1 60 3R 25540374 25540393 GGATCTAGAGAAGTGTCGCC 59 25540416 25540434 CAAACACCTCAGGGTAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CAP-D2 FBgn0039680 FBtr0085452 2 1 1 111 3R 25502981 25502999 GAGGTACTCGAGGAAGAGC 59 25503073 25503152 TATCGGGAAACTCCGTAAGG 59 NA Drosophila melanogaster 61 CG14515 FBgn0039648 FBtr0085389 3 1 1 94 3R 25023776 25024811 CAAGTCTACTTCACGGGCA 59 25024868 25024887 AATTTCAGTTATGGCCGCTC 59 NA InUTR Drosophila melanogaster 61 CG14523 FBgn0039612 FBtr0085349 2 1 1 60 3R 24704459 24704480 TATCTTCACAATCTGAGGACCA 58 24704420 24704438 GAGTCTTCACCTTGACCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98b FBgn0039582 FBtr0085288 3 1 1 118 3R 24178406 24178425 TACTGTTTCATTACGGCTGG 58 24178506 24178576 CCAGGGATATACACTGGGA 57 NA Drosophila melanogaster 61 CG12516 FBgn0039577 FBtr0301672 2 1 1 60 3R 24129598 24129617 AGTATATGGAATGAGCGGGT 58 24129557 24129576 CGAGTAGATTCATCATGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17856 FBgn0039576 FBtr0085279 2 1 1 60 3R 24120090 24120108 CAGTGGACCAAGTACGAGG 59 24120129 24120150 TTTGCACTTCGTTAAGATAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS22 FBgn0039555 FBtr0085247 3 1 1 60 3R 23743507 23743527 ATGATCCGTCGGGATTATCTG 59 23743548 23743567 GTAGCTTGTAGCTCAGAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 2 5 5 127 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529568 23529643 TAATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 3 3 3 125 3R 23512758 23512777 AATGACACCCAATTTGTCGA 58 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 dsd FBgn0039528 FBtr0301390 2 1 1 180 3R 23428660 23428746 GGATAGCGATGAGGTGGAG 59 23428170 23428188 GAAGCCCTCGTAACAGGAG 59 NA Drosophila melanogaster 61 CG12885 FBgn0039523 FBtr0085185 2 1 1 257 3R 23356166 23356520 AAACGAAGCGAGGATAATCG 58 23357009 23357030 CGCAAAGTACATTTGGTATTGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6283 FBgn0039474 FBtr0085151 3 1 1 61 3R 22846405 22846423 GTTCACACCATTGTGGGTC 59 22846362 22846380 TTAGCGGGCTTATCGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 3 2 2 81 3R 22796486 22796505 CATCATGGCCAAACTATTGC 57 22796543 22796626 CTGATACCACAGTAAGAAGTATCTG 58 NA Drosophila melanogaster 61 ball FBgn0027889 FBtr0085095 3 1 2 95 3R 22692369 22692508 AGCTGTCTATCCTGTCACTC 58 22692293 22692311 CAAATTCCGCTCGAAATGC 58 NA InUTR Drosophila melanogaster 61 CG6403 FBgn0039453 FBtr0085044 3 1 1 176 3R 22561814 22561974 CACCATGCTGAAAGCACTC 59 22561656 22561674 CATTCGTCGGCTATCACCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14245 FBgn0039452 FBtr0100553 2 1 1 109 3R 22554524 22554542 CTACTCCTCCTTCTGCAGC 59 22554615 22554633 TCTTCAGGTAGAAGTGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlB FBgn0039436 FBtr0085057 3 1 1 127 3R 22449123 22449211 CATTCATTGTCCTGTGTTTGG 58 22449016 22449035 AGATCCACCACTGATAGAGC 58 NA Drosophila melanogaster 61 CG6490 FBgn0039431 FBtr0302210,FBtr0302209 1 2 2 80 3R 22301120 22301202 CCAAGGATTAATGCTTCGAC 57 22301059 22301078 TTCTTGTTCTCCAACTGACC 57 NA Drosophila melanogaster 61 CG14239 FBgn0039424 FBtr0113295 3 1 1 81 3R 22229303 22229323 GCTTTGTTACCAACATCAAGG 58 22229178 22229261 AAATGCAATCTCGAATTGGC 57 NA Drosophila melanogaster 61 CG17198 FBgn0039366 FBtr0084924 1 1 1 60 3R 21599329 21599347 TTTGCACCCAAGTAGTGAC 58 21599287 21599307 GTTCGATCAGAATAATCGTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5071 FBgn0039347 FBtr0084884,FBtr0084885 2 2 2 60 3R 21444520 21444539 TGTCTATTGAAGAAGCACCC 57 21444562 21444580 TCCACGTTGATGTCTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 2 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG31510 FBgn0051510 FBtr0084783 3 1 1 114 3R 20948365 20948383 GGAGAGGGATATCGAGCAC 59 20946855 20948287 CAGATATTGAGATGCGGCG 59 NA InUTR Drosophila melanogaster 61 bai FBgn0045866 FBtr0084758 1 1 1 80 3R 20865531 20865614 AAAGTTCCTGCACATCAACG 59 20865657 20865675 TTCGTAGCTCTTGGTCTCC 58 NA Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 2 2 2 92 3R 20570004 20570514 TTGTTGAAAGCGGAAACGT 58 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 CG31125 FBgn0051125 FBtr0084665 1 1 1 60 3R 20479774 20479795 CTCATCACCACTCCTATTTACG 58 20479735 20479753 TCCCTGTCCAGTAGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17782 FBgn0039195 FBtr0084624 3 1 1 83 3R 20196737 20196931 AGTATCTGGACAAACGAGGT 58 20196673 20196691 CATGCTCCGTCGATTTCTG 59 NA Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 1 2 2 80 3R 20061613 20061632 GGAAGAGTCGGAAGACTCTG 59 20061671 20061764 TTGTCCTGTAGCACATCTATCTC 59 NA Drosophila melanogaster 61 CG18428 FBgn0039149 FBtr0084543 3 1 1 99 3R 19935224 19935242 AAGAATCTCCGCCGATAGC 59 19935299 19935390 CTATTCATCAGTGCTATTGGTATGG 59 NA Drosophila melanogaster 61 mbc FBgn0015513 FBtr0084459 2 1 1 80 3R 19620713 19620795 GTGCGCTTAAGCATATCCA 58 19620837 19620857 AATGCATCCCATCTTAGACTG 57 NA Drosophila melanogaster 61 CG10232 FBgn0039108 FBtr0084471 2 1 1 95 3R 19545728 19545748 CGAGTATTTCAATGTCCACGA 58 19545589 19545671 TGGGTATATCGAACTGGCG 59 NA Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 3 2 2 92 3R 19519809 19519828 GAAGATGTCGATTCGCTGTC 59 19519575 19519754 CAGACCAATCGACTGTTCC 58 NA Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 1 1 1 94 3R 19229284 19229355 TACGGCACTCAGACATGAG 59 19229208 19229229 CATTGTTATCCATGTCATAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG5278 FBgn0038986 FBtr0084281 1 1 1 97 3R 18385398 18385420 TCATGTACTCCTACTACTTCCTC 58 18384982 18385341 GAACTGGATCATCTGCAGG 58 NA Drosophila melanogaster 61 CG7054 FBgn0038972 FBtr0084254 3 1 1 101 3R 18291390 18291470 TCCAATACTACTCGCACAGG 59 18291533 18291552 CTGGGCCTGGTAATAATTGG 58 NA Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 3 2 2 81 3R 18274273 18274292 ATAGTGCTGGCTATCTGCAG 59 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 3 2 2 113 3R 18189835 18189928 CTATCAGCTATCAGATTAAGAGCCT 59 18189999 18190017 CCACCATCAAATTGACGCC 59 NA Nonspecific Drosophila melanogaster 61 CG5388 FBgn0038944 FBtr0084241 1 1 1 112 3R 18165950 18165968 AAGTTCGCAGTAGGTCCTG 59 18163322 18163340 CTCACTTCAACAGGAGGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17271 FBgn0038829 FBtr0110823 2 1 2 90 3R 16646430 16646448 CTTCAAGATGCACGACTCG 59 16645203 16646376 TCCACTATCCTTGACGTGC 59 NA Drosophila melanogaster 61 Rh3 FBgn0003249 FBtr0083876 3 1 1 60 3R 15907943 15907962 ACGCTCTACATCTTCTTCAC 57 15907902 15907920 AGACCCAAATCACCAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083836 3 1 2 95 3R 15885347 15885368 TCGTATATTCCATAGTCGCCTG 59 15883081 15885291 GTTCGAGCGTCATGTTCTC 59 NA Drosophila melanogaster 61 nos FBgn0002962 FBtr0083732 2 1 1 81 3R 14984695 14984786 CAAGGCCAAAGAGATCAGC 58 14984828 14984849 CACTGAGTGGCTATTGATAACC 59 NA Drosophila melanogaster 61 gwl FBgn0260399 FBtr0083674 3 1 1 82 3R 14574145 14574167 CAAGATAGATAACGCAATCGAGG 59 14574209 14574403 TTGAGATGCGATTTCGCTC 58 NA Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 2 2 2 92 3R 14197164 14197468 GAACACAATTCTGGATTCCCTG 59 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100275,FBtr0083603 2 2 6 110 3R 14080951 14081049 GTTTCCCAAAGTGGCACTC 59 14080859 14080879 TGTTCATTCTGATGTGCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0083604,FBtr0301556 1 3 6 157 3R 14080905 14081048 TTTCCCAAAGTTGAGCCAC 58 14080766 14080784 ACACTGCTATTCTGGTCCC 59 NA Drosophila melanogaster 61 CG18598 FBgn0038589 FBtr0083569 1 1 1 92 3R 14076986 14077069 GAGAACAACGAGGAGTCCC 59 14077125 14077143 GCTGACCATGAATTGGCAC 59 NA Drosophila melanogaster 61 Cbp20 FBgn0022943 FBtr0083551 3 1 1 81 3R 13990700 13990718 GTATAAGAAGACGCCCTGC 58 13990762 13990905 ATTCACAAATCTCATGGCCG 59 NA Drosophila melanogaster 61 CG7785 FBgn0038564 FBtr0083539 2 1 1 94 3R 13848387 13848462 CATTTATGTGGGCAATGGC 57 13848519 13848538 ACTGTTCCAATAGAATGCGT 57 NA Drosophila melanogaster 61 CG7431 FBgn0038542 FBtr0083532 1 1 1 127 3R 13578769 13579792 CACAACAAGAAATTCAAGCGC 59 13578662 13578680 ATCGTCTGGTTGGAGAACG 59 NA Drosophila melanogaster 61 CG5246 FBgn0038484 FBtr0083405 3 1 1 60 3R 12962264 12962283 CGAAGATCCATTGCAGTCAC 59 12962305 12962324 GTGTGGATCAACGCTATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5246 FBgn0038484 FBtr0083405 2 1 1 60 3R 12962263 12962281 TCGAAGATCCATTGCAGTC 57 12962305 12962323 TGTGGATCAACGCTATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 2 5 5 86 3R 12920387 12920405 TCTCGGTGAAGTACGATCC 58 12920256 12920337 TGAAGGGAGATCCTTGCAC 59 NA Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083313 3 1 2 82 3R 12277855 12278367 CCTTCATCACCGAAGATACGA 59 12277793 12277812 CAGCTCAACGTAGATTTCGG 59 NA Drosophila melanogaster 61 CG10407 FBgn0038395 FBtr0083237 2 1 1 80 3R 11871568 11871592 GGAGTAGTACTACATATAGACTGGA 58 11871380 11871532 TACCTTAAGAAAGGATGGCAG 57 NA Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 3 2 2 105 3R 11790730 11790804 TCACTAAAGGTAGAGGAGCTG 58 11790645 11790664 CCGACAGATCTATGTGGAGG 59 NA Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162,FBtr0083161 1 2 2 263 3R 11492269 11492289 CTTGACAAATATCCGTTGGAC 57 11497691 11497710 CAGTTCCATCATATCCAGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ea FBgn0000533 FBtr0083083 3 1 1 87 3R 11155263 11155284 GATGGCTCTAATTGAATACACC 57 11155393 11155414 TGTGATCACATATCTTGTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 tefu FBgn0045035 FBtr0110874 1 1 1 80 3R 11064032 11064050 GCGTGATCTTATCAGACCA 57 11063916 11063989 TAGGGAAACTTGGAAATGGG 57 NA Drosophila melanogaster 61 CG6687 FBgn0038299 FBtr0083140 2 1 1 131 3R 11032943 11032961 TCATATCCCGGCTAAATGC 57 11032768 11032849 CCATTAAGCTGAGGATAGGG 57 NA Drosophila melanogaster 61 CG6912 FBgn0038290 FBtr0083038 3 1 1 122 3R 10962463 10962481 ATATCAGGATGTCAACGGC 57 10962102 10962200 CTAAGAAAGTATCCAGGCCC 57 NA Drosophila melanogaster 61 Kif19A FBgn0038205 FBtr0082912 3 1 1 81 3R 9938553 9938646 CTATACTGCGGGATCTGACTC 59 9938492 9938510 GTTGTCGATTTGAGGCAGG 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 1 3 3 94 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536294 9536312 CACTATCGACCTCCACGTC 59 NA Nonspecific Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 2 2 2 67 3R 9536736 9536948 CCTATTATGACATTGGTGAAGC 57 9536690 9536708 ATTCCTACACGCTATGCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Lip3 FBgn0023495 FBtr0082771 3 1 1 89 3R 9197224 9197396 ATTTCTGATTGCGGTGAGC 58 9197153 9197175 CATAGTCAGGATGTAGTTGTCAC 58 NA Drosophila melanogaster 61 CG15888 FBgn0038131 FBtr0100257 2 1 1 126 3R 9111205 9111707 CAAGAAGGCACCCAAATCC 59 9111097 9111115 GTAGGTCTCCACACTTCCA 58 NA Drosophila melanogaster 61 timeout FBgn0038118 FBtr0082712 1 1 1 80 3R 8921071 8921091 CTATCTATTGTGGGCCATACG 58 8921132 8924593 AACGATTCGCTGACTAACTG 58 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 2 2 2 80 3R 8901964 8901987 AAGACCCTGTATCAGTATATCCAC 59 8902025 8902132 TTGTCCTTTGTACAGCAGGA 59 NA Drosophila melanogaster 61 Ect3 FBgn0260746 FBtr0082487 3 1 1 87 3R 7827074 7827092 ACTACTTCCGTGCTCATCC 59 7827143 7827217 TCCACATAGGTTGTCACCG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 CG5281 FBgn0037902 FBtr0082391 2 1 1 212 3R 7261590 7261608 TTTCCGGAATCTCCATTCG 57 7261784 7261863 AAAGTTTCAGCATCCTGCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG6744 FBgn0037901 FBtr0082402 3 1 1 110 3R 7259975 7259993 TCTCGGATCTAAGGGTTCG 58 7259676 7259901 ATTGGACTCGTTTGAGCTG 58 NA Drosophila melanogaster 61 CG31441 FBgn0051441 FBtr0082355 3 1 1 147 3R 7062924 7062943 GATGCAGCAGTAAAGTGGTC 59 7063053 7063130 ATCTCGCAGTGGTACTTCC 59 NA Drosophila melanogaster 61 CG6621 FBgn0037855 FBtr0082329 2 1 1 85 3R 6718286 6718369 CCATAAAGGCCGTGATCCT 59 6718219 6718238 GTCATTCTGGACAAAGCTGC 59 NA Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082330 2 1 2 87 3R 6714848 6714868 ACAAATTAGTACGCGAACGAG 59 6714052 6714799 AACCTCTCCTTGAGCTTGG 59 NA InUTR Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201,FBtr0300045 3 2 2 68 3R 6675704 6675722 AACATGTGCAAGTGTCTGG 58 6677018 6677037 AACAAGCACACTAATTGCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TfIIFbeta FBgn0010421 FBtr0082310 2 1 1 119 3R 6592970 6592989 CTAAAGCTGGAGTCCATACG 57 6592805 6592890 CTCCCGATATTCAATGTTGTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31467 FBgn0051467 FBtr0082320 2 1 1 60 3R 6532249 6532267 CAGGAGTATGTGCTACCGA 58 6532207 6532227 TTCTAATATCTCCGACCACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 3 2 2 81 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515483 6515979 CCCAGAATTTGGCATCTGG 58 NA Nonspecific Drosophila melanogaster 61 CG6345 FBgn0037816 FBtr0082258 3 1 1 60 3R 6240799 6240819 TGTCAACTCGTACAGAGACAG 59 6240759 6240777 TGGAGTTGCTTTCAGTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34303 FBgn0085332 FBtr0112499 3 1 1 89 3R 5977397 5977415 AGCTGTGCGAAATTAAGGC 59 5977270 5977347 GGATCTCAACCTCTGATATGGT 59 NA Drosophila melanogaster 61 knk FBgn0001321 FBtr0082194 1 1 1 80 3R 5949264 5949287 GCTTCCAGTTGAATACGTATAGTC 59 5949145 5949226 CATCATCGGATGACTTGAGC 58 NA Drosophila melanogaster 61 CG33783 FBgn0053783 FBtr0091784 2 1 1 89 3R 5892630 5892649 GAATTAAAGGTCCTGGGTCG 58 5892701 5892897 TAGAATGCACGTCGAACTG 58 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 1 2 2 235 3R 5826877 5826895 CAACCAAATCCGTCCAGAC 58 5826602 5826678 GTCTTTGAGTTTCTCGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8149 FBgn0037700 FBtr0082061 3 1 1 149 3R 5330382 5330403 CATCACTAACTAACTGTACGGG 58 5330567 5330585 TATTTCCATTCACGGCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9740 FBgn0037669 FBtr0081984 1 1 1 123 3R 5083898 5083989 GATTATCCATAGGAAGTCATGTCTC 58 5083799 5083817 GAAGTCAATTGTGGAGCCG 59 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996,FBtr0081997 1 2 2 134 3R 4868681 4868699 GAAAGCCGGGTTTGATCAC 59 4868498 4868584 GGCGAACTTCTTCAAAGTCC 59 NA Drosophila melanogaster 61 CG11966 FBgn0037645 FBtr0082014 1 1 1 232 3R 4788146 4788164 AACCACTATCCACTACGGA 57 4779569 4779587 TCATTGTCAGTGGACCCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8007 FBgn0037600 FBtr0081876,FBtr0081877 3 2 2 132 3R 4445732 4446035 TACTCCAAGAATCACGCCT 58 4446131 4446149 CGGTCAGGCAATATGTCAG 58 NA Drosophila melanogaster 61 eIF4AIII FBgn0037573 FBtr0081834 2 1 1 83 3R 4139852 4139931 CATCTTGGTCAAGCGTGAC 59 4139978 4139996 TCGAATTTCCATTCCTCGC 58 NA Drosophila melanogaster 61 CG18749 FBgn0042182 FBtr0100545 3 1 1 80 3R 4072981 4073000 TTCGCTGATTAATTACGGCT 57 4073043 4073118 TTAAGCCTGGTCGTATTCG 57 NA Nonspecific Drosophila melanogaster 61 CG7878 FBgn0037549 FBtr0113205 2 1 1 80 3R 3949158 3949179 CTGAGTCCAATAAGGACAATGG 58 3949219 3949293 CAGTAGCTGCTATCGAAGCT 59 NA Drosophila melanogaster 61 Rtnl2 FBgn0015831 FBtr0081548 3 1 1 60 3R 3355236 3355257 TCTTACGTTTCTATCCTCACCC 59 3355197 3355217 GCCAGATAAAGAGTCTCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Est10 FBgn0015569 FBtr0289953 3 1 1 80 3R 3313942 3314037 TGTATGTCAAAGATCTGCAGC 58 3313882 3313900 CTTCGCCAACTTGATAGCC 59 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0081587 3 1 2 173 3R 3190259 3190334 AAGACCGTTGACTTCTCGA 58 3190104 3190122 AACAACTGCCAAATGGTCC 59 NA InUTR Drosophila melanogaster 61 CG1227 FBgn0037491 FBtr0081598 2 1 1 80 3R 3074115 3074191 AATTTACACAGAGGACATGCAC 59 3074056 3074074 ACACTAAACACGAATGGCC 58 NA Drosophila melanogaster 61 CG1105 FBgn0037465 FBtr0081645 2 1 1 91 3R 2890484 2890611 ATCCTAATATACCGCCACCG 59 2890412 2890430 GATCATCTGCGTATGCTCG 58 NA Drosophila melanogaster 61 Osi16 FBgn0051561 FBtr0078608 2 1 1 134 3R 2131298 2131375 CTCATGGCAGAAGTTGCTC 58 2131473 2131491 TACGAGGGACTTGTCATCC 58 NA Drosophila melanogaster 61 NPFR1 FBgn0037408 FBtr0078590 2 1 1 92 3R 2018052 2018071 ACACCCTGGTTGTTATAGCC 59 2018125 2018206 AAAGTAGGTCCGATATGGCC 59 NA Drosophila melanogaster 61 disp FBgn0029088 FBtr0078665 1 1 1 84 3R 1677590 1677794 GACTATATGAAGCGCAGATGC 59 1677526 1677544 CAAAGGGAAACTGTGCGTC 59 NA Drosophila melanogaster 61 CG2023 FBgn0037383 FBtr0078666 2 1 1 80 3R 1650134 1650153 ATGCGTTTACATTACAGGCC 59 1650020 1650094 TCAGGATGTCGTGTATTATTGC 58 NA Drosophila melanogaster 61 CG2091 FBgn0037372 FBtr0078678 3 1 1 115 3R 1579957 1580036 CCAGGATTTGTGCAGTGTG 59 1579860 1579881 TTTGGTAGAGATCAGGAGTCTC 58 NA Drosophila melanogaster 61 cas FBgn0004878 FBtr0078725 2 1 1 185 3R 1540407 1540425 GATGCATGCCAATTTCCAC 58 1540170 1540258 TTGTGCTTGTCCATATCGG 57 NA Drosophila melanogaster 61 CG2931 FBgn0037342 FBtr0078753 1 1 1 60 3R 1393518 1393536 CAAGAGCAAGGGATTTGGC 59 1393476 1393494 CATGGCCCGTATAAAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 2 2 2 109 3R 1294736 1294810 CTAGTTCGGTCTACTGGTGG 59 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 2 2 2 83 3R 1233859 1233877 GATACCTAGGATACGCGCT 58 1233433 1233812 CCATGACGGATGAACTCTC 57 NA Drosophila melanogaster 61 CG34277 FBgn0085306 FBtr0302422 2 1 1 60 3R 1196532 1196550 CAGGAAACGGACATAGTGG 58 1196572 1196592 TATGGATCCGAATGATACACC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12007 FBgn0037293 FBtr0078842 2 1 1 60 3R 955055 955074 CCTGCCTAGATCTTCTGGAG 59 955097 955115 AGGGCACTTGTTAGTAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17387 FBgn0037276 FBtr0078880 3 1 1 87 3R 610215 610233 CATGAACTCGCTGGATGAG 58 610088 610164 GTACAGTGTCAGGTTCTGC 58 NA Drosophila melanogaster 61 Lcp65APsi FBgn0020646 FBtr0076993 2 1 1 83 3L 6141085 6141438 GTTTAGGGCTACTACTTCCGA 59 6141483 6141501 ACAATCTCTGCATCCGGAG 59 NA Drosophila melanogaster 61 Uhg7 FBgn0083121 FBtr0300232 2 1 1 160 3L 1667231 1667249 GTAGAGCGAGGATGAACGT 59 1667033 1667109 AAAGACAGCCAATTTAGAGCG 59 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 3 2 2 87 3L 22672233 22672309 AACTCAACGATGGCATTCC 58 22672360 22672378 CTATTGCCCTGCGTAATCC 58 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 1 3 3 80 3L 22284253 22284339 CTTACCAATTGGTATGTTCGAC 57 22284378 22284398 GTCAAGTGATTGAATGCACTG 58 NA Drosophila melanogaster 61 Hem FBgn0011771 FBtr0078510 2 1 1 61 3L 22279929 22279948 CCTCAGGCATAATGACAACC 58 22279822 22279908 CAAGATCTTCATTGCTCTTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG14566 FBgn0037127 FBtr0078453 2 1 1 245 3L 21733181 21733199 CTATCCCTCGGCAGATGAG 59 21732954 21732972 GCTACTCTCCGGTAGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33291 FBgn0053291 FBtr0078427 1 1 1 85 3L 21658366 21658495 GTGACCTTCAGAGTGGAGG 59 21658544 21658562 CTCAGCATGCTTTGGAAGC 59 NA Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 3 3 3 81 3L 21414145 21414217 GTTATCTATGATCGCCATCCTG 58 21414085 21414105 TCATTTGAATGACGAGGTCAG 58 NA Drosophila melanogaster 61 CG32436 FBgn0052436 FBtr0078343 1 1 1 80 3L 21346043 21346061 GGAGAAAGAGCGCATACAG 58 21346103 21346218 CTGTACTCGGGTTTAATTCCA 57 NA Drosophila melanogaster 61 CG42337 FBgn0259239 FBtr0299857 3 1 1 82 3L 21179489 21181897 CGATATTACCGATGACATAAGCG 59 21179429 21179447 CAACTTGCGATGAAGTGGG 59 NA Drosophila melanogaster 61 Mst77F FBgn0086915 FBtr0078270 1 1 1 104 3L 20810625 20810705 TATTCTGCGGAACCATTGG 57 20810539 20810558 GCCACTTATTTCAGAGTGCA 58 NA Drosophila melanogaster 61 CG5872 FBgn0036991 FBtr0078194 2 1 1 80 3L 20430145 20430167 ATAGAGGAGAGTCCCAATTTGAG 59 20430207 20430366 CGTGTTGTCTGTTCTCTGC 59 NA Drosophila melanogaster 61 Tom20 FBgn0036928 FBtr0074903 3 1 1 153 3L 19994330 19994350 GGATACTGCATCTACTTCGAC 58 19994526 19994960 GAAGGAAATATCTTTCGATGGC 57 NA Drosophila melanogaster 61 hale FBgn0036924 FBtr0074912 1 1 1 106 3L 19978587 19978664 AGGGTCTGAGCATTGACTG 59 19978499 19978517 CAAGCCACCATTGAACTGG 59 NA Drosophila melanogaster 61 CG33710 FBgn0053710 FBtr0091698 2 1 1 93 3L 19945717 19945792 CAATACGGCTGACCATAGC 58 19945642 19945660 GAAGTGGCACGTAAATCCT 57 NA Drosophila melanogaster 61 CG8786 FBgn0036897 FBtr0290116,FBtr0290118,FBtr0074962,FBtr0290117 1 4 4 80 3L 19635042 19635060 TTTGCAAACCTGCATCCAC 59 19634305 19635000 TTATAAGCAACACCCTTCACG 58 NA Drosophila melanogaster 61 CG32213 FBgn0052213 FBtr0273409 2 1 1 88 3L 19468994 19469071 TCAAATACGCTGTCGTCGT 59 19469123 19469141 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14082 FBgn0036851 FBtr0075031,FBtr0114620 2 2 2 292 3L 19103337 19103355 GAGATTCAACCACCTGCAC 58 19101361 19101379 CGTTCAGACTCAGGTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11577 FBgn0036847 FBtr0075034 2 1 1 60 3L 19089090 19089108 ATTGGAAGCTCGACTTGGA 59 19089048 19089068 GGAGTATCCGATTTCGATGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14077 FBgn0036830 FBtr0299821 1 1 1 80 3L 18906645 18906663 AAACCTCTAACAGCGATCC 57 18906532 18906602 GTGTTGTGCAACAATTTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG14074 FBgn0036818 FBtr0075061 1 1 1 60 3L 18860226 18860245 CGGACTCAGATTCAGAAGCA 59 18860263 18860286 TCACCAGATTCTAGGGTTATACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32027 FBgn0052027 FBtr0075059 2 1 1 80 3L 18835358 18835455 AGGAATATGAGGAGACGGT 57 18835496 18835517 GAAATATGTAACAGGTTGCCAG 57 NA InUTR Drosophila melanogaster 61 CG42495 FBgn0260027 FBtr0300582 3 1 1 80 3L 18660883 18660957 ATGTCTTATCGTTTGTCCTAGG 57 18660996 18661016 GAATGAGAGTTATTCCGATGC 57 NA Drosophila melanogaster 61 CG32196 FBgn0052196 FBtr0273401 3 1 1 81 3L 18453161 18453338 GTCGGTAAATTAGAGAACTTTCGG 59 18453103 18453121 TGGGTACAATTGTAGCGGG 59 NA Drosophila melanogaster 61 CG13698 FBgn0036773 FBtr0075137 1 1 1 89 3L 18083167 18083185 CTCATCCAGGGAGAAGGTG 59 18083031 18083114 ATGATGGCCAGTACACCTC 59 NA Drosophila melanogaster 61 CG5567 FBgn0036760 FBtr0075161 3 1 1 93 3L 17836431 17836453 ACCAATCTCCTGGAATTATCCTC 59 17835643 17836379 AGATCCAAAGGACACCATCG 59 NA Drosophila melanogaster 61 CG32185 FBgn0052185 FBtr0075174 1 1 1 60 3L 17488010 17488029 ATACTGATCCTCGTGTCCTG 58 17488050 17488070 GATATGGTTGACGATAGGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222,FBtr0302509,FBtr0302510 2 3 3 132 3L 17468580 17468599 ATCGTCACCTACAAGCTGTC 59 17468694 17468768 GGTATCCCACGATGAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 sina FBgn0003410 FBtr0075332 1 1 2 142 3L 16847495 16847513 CGTAAAGGCTGACTGACTG 58 16847619 16849408 TTGTGCTTCTGTATGGCAG 58 NA InUTR Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323,FBtr0075322 2 2 2 211 3L 16767352 16767370 GAACAGAAATCTCGCCCAG 58 16767607 16767626 ATCATGTTAGCGATTGGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Mo25 FBgn0017572 FBtr0075358 2 1 1 60 3L 16607331 16607349 CAACTTCCATACGGATCGC 58 16607289 16607309 GATCAGATAGGCCTTCTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32159 FBgn0052159 FBtr0075409 2 1 1 80 3L 16419918 16419936 TTCAGCAAGTTTGTAACGC 57 16419745 16419876 GATCACGATATCTGGATGGAC 57 NA Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0110866 1 1 2 83 3L 16335306 16335712 ATGCTCAAGGGAGACAGTC 59 16335759 16335777 CTTTGCGTTGGATCAGCTC 59 NA Drosophila melanogaster 61 CG34246 FBgn0085275 FBtr0112440 3 1 1 87 3L 16226641 16226659 CCAGTTGCAGACCATTGTG 59 16226769 16226788 GATGAGGGAACTCCAGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34246 FBgn0085275 FBtr0112440 2 1 1 86 3L 16226641 16226659 CCAGTTGCAGACCATTGTG 59 16226769 16226787 ATGAGGGAACTCCAGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13074 FBgn0036567 FBtr0075496 3 1 1 128 3L 16089349 16089427 CTTGTGGATGAGGACATGG 57 16089239 16089260 CCTATAGTATTCCAGTGACCCA 58 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075499 1 1 3 105 3L 16033154 16043566 ATGTCTCTGTTTCGACTTCAG 58 16033069 16033087 TCAGCTACAACAGATGCCA 59 NA InUTR Drosophila melanogaster 61 CG7841 FBgn0036502 FBtr0075604 3 1 1 62 3L 15499244 15499343 ACGTTACATAAATGACTCCTGG 58 15499203 15499221 GATGAGCTCGAGTCGTAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13472 FBgn0036450 FBtr0075691 2 1 1 82 3L 14782305 14782431 GATGGAAGGTATTATGAGGCTG 58 14782474 14782492 TCATGGTTTCCATAGCCCA 58 NA Drosophila melanogaster 61 mop FBgn0036448 FBtr0075700 2 1 1 80 3L 14764769 14764856 GATTCGATTCACCTATCGTGTC 59 14764710 14764728 ACTCATTGCCCTCTATCGC 59 NA Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075686 2 1 2 92 3L 14698842 14698861 TCCAATGTTATGGGCTACGA 58 14698915 14699045 TGGATATTGATCCAGGTCGT 58 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 3 3 3 81 3L 14621498 14621575 GATGGAAGCTTAGGAGATGG 57 14621436 14621457 GATCGTTGTTTATCATCTGCAG 58 NA Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075737 2 1 2 80 3L 14211379 14211452 CCAAGTTATCCGATCTGGCT 59 14211492 14211513 CTATATCGAAGTAAACGCGTGG 59 NA InUTR Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749 2 1 2 81 3L 14090899 14090977 AGGGTATTGACCGCATGTC 59 14090836 14090856 AGAGGCTGACGAATATTCTGG 59 NA Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 3 2 2 110 3L 13953083 13953101 AAGAGAAGGAGAGCCTCAC 58 13953175 13953737 GTGCTTGTAAGGTGGTCTC 58 NA Drosophila melanogaster 61 CG8750 FBgn0040812 FBtr0075802 2 1 1 62 3L 13835893 13835913 GACTGGAAGGATACTAGGTCC 58 13835851 13835869 TTGGCCAAGAAGTTCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bru-3 FBgn0036379 FBtr0075816 1 1 2 80 3L 13631656 13657530 CAACAAGTTACTATGAACCGTG 57 13577352 13577370 AAATTTGACGAAAGCGCAG 57 NA Drosophila melanogaster 61 CG32121 FBgn0052121 FBtr0113424 2 1 1 83 3L 13410947 13411037 GAATGTTCGGTATGCCTGC 59 13410882 13410900 GGATGTCGGTAGCTAACGT 59 NA Drosophila melanogaster 61 CG10222 FBgn0036356 FBtr0075861 3 1 1 60 3L 13404992 13405010 CCACGTTAATGTGCTTTCC 57 13404950 13404969 AAAGTGTAACTTGGTCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rh7 FBgn0036260 FBtr0076020 2 1 1 81 3L 12160655 12161251 CGGGTCTGAGCAATTACAG 58 12160592 12160610 TTCACCTTGGCAATGTAGC 58 NA Drosophila melanogaster 61 CG17154 FBgn0036246 FBtr0075990 1 1 1 60 3L 12082045 12082065 CCAAGCTAACGATATACGTGG 58 12082087 12082105 TGTATGCCCAATAGCTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 2 4 4 80 3L 11993787 11993865 TCAAGTTTAACCTGAGCGAG 58 11993726 11993745 GCTTCTTGAACTGAATTCCG 57 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 1 4 4 80 3L 11873192 11873213 AAGCTTCTAAAGCACTAAAGGC 59 11873251 11873329 TGGAATTATCACACTGTGATGC 59 NA Drosophila melanogaster 61 Muc68Ca FBgn0036181 FBtr0076140 2 1 1 60 3L 11612197 11612215 CAATCCACCACCTCATCTG 57 11612155 11612173 TGTTACCGCCATTTGTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33271 FBgn0053271 FBtr0076150 2 1 1 196 3L 11570468 11570486 CTTCCTCTGCCAGTACCAC 59 11570290 11570308 AATCACGATGGTCTTGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32079 FBgn0052079 FBtr0300188 2 1 1 80 3L 11019700 11019769 TTGAATCTGTTGGAGTGATCCT 59 11019809 11019828 TTAGAACTCCACAGGTTCCC 59 NA Drosophila melanogaster 61 CG42520 FBgn0260395 FBtr0300666,FBtr0300665 1 2 2 109 3L 10618183 10618201 GGTCTTCGATGTCTTCCTC 57 10618031 10618110 ACTCAATTGCCATGGTCAG 58 NA Nonspecific Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076396 1 1 2 223 3L 9701358 9701376 TACGCTCCAGTAAAGCCTG 59 9701563 9701650 TTGTTTGGGATTGCTTCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Hsp27 FBgn0001226 FBtr0076454 2 1 1 60 3L 9377683 9377701 TTGTGCGCAAGTATACCCT 59 9377724 9377743 GAGACAGTGGACACTACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 3 1 1 69 3L 9347871 9347950 ATTATGGTTGCTCAGGCGA 59 9347980 9348001 CGATTAAAGATGTTCCACCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6915 FBgn0035898 FBtr0076658 2 1 1 100 3L 8471778 8471796 CCATGCCACCAATCAACTG 59 8471630 8471717 GATACAACTTAATGGCCTCCTC 58 NA Drosophila melanogaster 61 CG7182 FBgn0035878 FBtr0076677 1 1 1 60 3L 8338727 8338745 CCCATCAATATCACACGGA 57 8338685 8338704 TAGCTGGGTATGGATAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr66a FBgn0035870 FBtr0300280 1 1 1 117 3L 8299923 8299943 TGGCATGATTTACATGCTGAG 59 8299765 8299844 GAAAGTCAAGGTGCTCTGC 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 Srp9 FBgn0035827 FBtr0076750 2 1 1 81 3L 7929700 7929784 GACGGACAACGTTAAGTGTG 59 7929826 7929846 CAAGTTGCTGGTGATCTTCTC 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 3 2 3 82 3L 7460745 7460830 CGAAATACGCATTTATGCCA 57 7460875 7460893 GGTACTGTTGTGCAAACAG 57 NA Nonspecific Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0273402 2 1 2 60 3L 7151614 7151632 GGTAAACGACGACACAGAG 58 7151654 7151674 AAGATGAGCTAGTGTGATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926,FBtr0076927 2 2 2 86 3L 7117436 7117512 CGTTATGTCCACTGTCTGC 58 7117368 7117386 TACAGCAAGTGGTCATCCA 58 NA Drosophila melanogaster 61 CG14820 FBgn0035718 FBtr0076894 2 1 1 80 3L 6926767 6926987 CTTATTCCCATGAAGTGGAACG 59 6927027 6927046 GATCAGTTCCAATGCACTCC 59 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 3 2 2 81 3L 6540630 6540649 TAAATGCCTCGGAAAGTCCA 59 6540691 6541796 GAGATAGTATCGCTGCAACAG 58 NA Drosophila melanogaster 61 CG7376 FBgn0035689 FBtr0076998 1 1 1 80 3L 6170779 6170798 GCATCTGAAAGAGGATTCCG 58 6170837 6170919 CATACCATCATCACATACCTCAC 58 NA Drosophila melanogaster 61 Cpr65Av FBgn0052405 FBtr0077024 3 1 1 156 3L 6132697 6132825 ACAACTTCGGCTACGAGAC 59 6132559 6132577 TCATCCGCAATGTAGTGCA 59 NA Drosophila melanogaster 61 CG10469 FBgn0035678 FBtr0077064 2 1 1 98 3L 6086020 6086038 GATGAGCCCAATATGTGCG 59 6085881 6085963 CACTTTCCAGAGATTAGACTTTGG 59 NA Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 3 1 1 74 3L 5771740 5771759 ATGGATCTTCCTTCCAACGG 59 5771623 5771705 TTTGTTTATGAACTCCTCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34047 FBgn0054047 FBtr0100102 2 1 1 161 3L 5099668 5099687 ATACATTTGGATGCGATGCA 58 5099421 5099547 ACCACAAGATAAGTTAGCTGAC 58 NA InUTR Drosophila melanogaster 61 Rpd3 FBgn0015805 FBtr0073317 3 1 1 72 3L 4627497 4627517 CTCAACTATGGGCTCTATCGA 59 4627629 4627647 ACTTGGTCATCTCATCGGC 60 NA DesignNoJunction Drosophila melanogaster 61 CG32241 FBgn0052241 FBtr0073330 2 1 1 113 3L 4466462 4466791 CAAACCAAGCAGAAATTCCTG 58 4466369 4466387 CGCATAGTGGTATCCATCC 57 NA Drosophila melanogaster 61 CG32240 FBgn0052240 FBtr0073336 3 1 1 134 3L 4381317 4381393 TTTGTGACGGTTCTCAGCT 59 4381201 4381219 TCTTTGAATCACCCGTCGT 59 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 1 2 3 176 3L 3961677 3961695 GAACATCTGGAATGGTCCG 58 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 3 1 2 199 3L 3404904 3416805 ATAAAGCAATCGCAGCTGTC 59 3404724 3404744 ATGTAGTGTTGTAACCAGGAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0300749,FBtr0073076 2 2 2 79 3L 3377172 3377191 ATTGGATACCTGGAGGACAC 58 3377233 3377251 CAACAGAGAATTCCCAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32295 FBgn0260480 FBtr0072962 2 1 1 60 3L 2526492 2526510 GATCAGCAATGCCCAAACC 59 2526450 2526473 GAGAAGATTGATTCAGATCACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13919 FBgn0035248 FBtr0072759 3 1 1 60 3L 1645841 1645859 CATATACGTGACCGTTGCC 58 1645883 1645901 GCCAACATAGAAGATGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 312 FBgn0029514 FBtr0072680 3 1 1 80 3L 1351464 1351539 TTTAAAGCGAGGTGTTCGC 59 1351580 1351601 AATATGTCGTCCACATTCTCCT 59 NA Drosophila melanogaster 61 CG9139 FBgn0035202 FBtr0072663 2 1 1 122 3L 1296723 1296743 ACCAAAGTCTCAGACATTGTG 58 1296824 1296918 GAAGAGAAATTTGTGGTTCTGC 58 NA Drosophila melanogaster 61 LysE FBgn0004428 FBtr0072630 1 1 1 121 3L 1212950 1212968 AAATGAAGGCCTTCATCGT 57 1213053 1213071 CAATTGGTCACGAGGAACG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12030 FBgn0035147 FBtr0072556 1 1 1 75 3L 650511 650589 CAAGTCTGACAAGCGTTGG 59 650628 650646 AATCCGACCACTGATGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Me28S-G2703c FBgn0082929 FBtr0113510 3 1 1 60 2R 10511515 10511536 GAAATGATGACAATACAGTCCG 57 10511556 10511575 ACTTATCAAACAGCATGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30449 FBgn0050449 FBtr0086333 1 1 1 60 2R 15616798 15616816 CTAGTGGTTAGGCTACCCG 59 15616837 15616858 TTCCTATACAGGGAACTGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr FBgn0001325 FBtr0072449 2 1 1 110 2R 21114502 21114893 CAAACGCGAACCTTAGCTG 59 21114966 21114985 GCTTGTAGCTGATGTGTTGG 59 NA Drosophila melanogaster 61 gsb-n FBgn0001147 FBtr0072461 3 1 1 94 2R 20928729 20928864 ACCATCAAGACTATTCCAAGCT 59 20928656 20928674 GTCGCTGAGGTGTAGTGAG 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 1 2 6 89 2R 20819715 20819787 GAAGCGATTCATGATCCGC 59 20819644 20819662 GACTTAAAGAACCAGGCGC 59 NA Drosophila melanogaster 61 Fcp1 FBgn0035026 FBtr0072342 1 1 1 80 2R 20458011 20458029 CAAGTTCTTCTCGCACAGG 58 20457868 20457970 AACAGAGCCTTTAAATTGTCCG 59 NA Drosophila melanogaster 61 uri FBgn0035025 FBtr0072308 1 1 1 80 2R 20454955 20455025 GAAGTCAGTTCTCCAAGCC 58 20455067 20455087 TTTGATCATTACTGGTCGGAG 57 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0290218 2 1 4 89 2R 20443014 20443032 GACCATGTTCTTCCGACTG 58 20443084 20443536 CAATTGGCCTTGCATAATCG 58 NA Drosophila melanogaster 61 CG3356 FBgn0034989 FBtr0072262 1 1 1 80 2R 20088403 20088482 GTGGATTCTTTATGGTAACCAC 57 20088520 20088541 GTTTCTCATAGTCTTCGAACAG 57 NA Drosophila melanogaster 61 CG3362 FBgn0034988 FBtr0072261 2 1 1 60 2R 20083961 20083979 TCCGAACGTGAAGGTAGTC 59 20084003 20084021 AAAGCCATCTAGAAGGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snama FBgn0086129 FBtr0072249 1 1 1 81 2R 19976723 19976741 ATGATGAGTCACCACATGC 57 19976786 19977092 GATACGGCACATAGCTGAG 57 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 3 2 2 88 2R 19924653 19924731 GTCAACCGACTAACCACCT 59 19924583 19924601 TTGACTGTTTCGCAAGTCG 59 NA Drosophila melanogaster 61 CG4882 FBgn0025336 FBtr0072225 3 1 1 152 2R 19769762 19769780 GCGGAATTCAACAAGGTGG 59 19769574 19769648 CTTCTGTTTCCTGAGCTTGAG 59 NA Drosophila melanogaster 61 CG5549 FBgn0034911 FBtr0301162 2 1 1 80 2R 19718144 19721369 CTGGAGCACAAAGTATTGCT 58 19721412 19721430 CAGGTGCGAAGGTAGTAGG 59 NA Drosophila melanogaster 61 l(2)not FBgn0011297 FBtr0072095 1 1 1 75 2R 19596952 19596970 CAACTACAGTCTGTTGCGC 59 19594245 19594265 GAGAGCCGAGTAGATGTACAC 59 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302125 2 1 13 82 2R 19547149 19547168 GAATCTTGGGCGTTCTTCTC 59 19547207 19547925 CTCTAGACTAGAATTCAGAACTCTG 58 NA InUTR Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 3 2 2 80 2R 19520720 19520739 CTACTATGGACTGTAGCGGT 58 19520780 19529774 GATCACCATGTGACAAATCGT 59 NA Drosophila melanogaster 61 CG34210 FBgn0085239 FBtr0112403 2 1 1 117 2R 19239123 19239141 TCTACTACCAAGTCGAGCG 58 19239283 19239302 GGTTTCACCAGGAAGTTCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3499 FBgn0034792 FBtr0071906 3 1 1 94 2R 18772753 18772827 CAACAGCTAAATCAGATACGTG 57 18772680 18772698 GCATTCTTTAGTCGGGAGG 58 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 1 2 8 80 2R 18618369 18618388 CCCAATAGCGCCTATATCAC 58 18618237 18618330 CTCGTAACCATTCTTACTAACGG 59 NA Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923,FBtr0071922 1 2 2 80 2R 18583221 18583297 CTACAATTGTCGCAAGAGCC 59 18583160 18583178 CAGGTCTCACTGGAAGAGG 59 NA Drosophila melanogaster 61 ventrally-expressed-protein-D FBgn0053200 FBtr0071826 1 1 1 80 2R 18296221 18296298 AAGCCAAGATGATACCGCA 59 18296342 18296360 ACTGCTCAGAGAACTGTGG 59 NA InUTR Drosophila melanogaster 61 CG34206 FBgn0085235 FBtr0112399 3 1 1 60 2R 18051972 18051991 ACACAATTAAATGCAAGCCC 57 18051931 18051954 GTGATAAACTGATGTCCTTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556,FBtr0299554,FBtr0299555,FBtr0299553 1 4 5 94 2R 17956091 17956112 CTACTCATATGTGATTGCCGTG 59 17956164 17956249 CTGGGAATTCAATTATCTCCGC 59 NA Drosophila melanogaster 61 CG30401 FBgn0050401 FBtr0071731 3 1 1 120 2R 17874035 17874053 ACCAAGGCCGGAATATCAC 59 17873878 17873951 AATAGTTGGCAGAACCCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 1 2 2 92 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556901 17556919 GATTTGCTTGCTGTTGCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071700 2 1 2 109 2R 17406363 17406442 CCTTATGAATCTGGGAAATGC 57 17406274 17406295 GAATGATTTCCAGAAAGGTCTC 57 NA Drosophila melanogaster 61 CG33704 FBgn0053704 FBtr0091692 2 1 1 60 2R 16837739 16837760 GAATATAACCATCCATTGGCGA 58 16837780 16838069 GATGAGTTCGTTCCAGTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 otp FBgn0015524 FBtr0110772 3 1 2 178 2R 16774171 16774190 AAGACAACCAATGTCTTCCG 58 16772858 16774030 TACATCATGGAGTCGCCTG 59 NA Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245,FBtr0086246 3 2 2 82 2R 16551360 16551447 GCAATAATGTATCGGTAGATCG 57 16551299 16551317 AAGATTGTGGTTCTCCACC 57 NA Drosophila melanogaster 61 Mgat1 FBgn0034521 FBtr0086259 3 1 1 80 2R 16447787 16447866 CCTGATTAGAATCGAAGGTCCA 59 16447728 16447748 AGACCCAGCATCTTAGTTGTC 59 NA Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0086338 2 1 2 84 2R 15834744 15834835 AAACTCCGGAAGTAAGCAG 57 15834883 15834901 GTAAGTCGCTACTAGTGGC 57 NA InUTR Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 1 1 1 107 2R 15137500 15137518 AAAGCATGAGGCCTTTACC 58 15137589 15137811 GCCTTGTTCTCCAGTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 2 2 2 89 2R 14683829 14683847 CTCCCTTCGCGTTAATCTC 58 14683655 14683777 TCATTCCAGTCGAATTCAGG 57 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 3 4 4 152 2R 14646792 14646903 GTCTTCCGCAAGACAAGTC 58 14646658 14646680 CCATATCCGTAGGAGATATTGGA 58 NA Drosophila melanogaster 61 CG15087 FBgn0034380 FBtr0086647 1 1 1 80 2R 14596728 14596746 AGTCCACCCAATCTACTGC 59 14596614 14596687 CAGAGCAATCAGTATGTGAACG 59 NA Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 3 2 2 159 2R 14329807 14331168 AACGTGTTGATTTCTCATGGC 59 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 CG12263 FBgn0034346 FBtr0086691 3 1 1 80 2R 14315252 14315270 CTGTTTGCCTACTCCAAGC 58 14315314 14315401 CAGATCAATCTGCTGCAGC 59 NA Drosophila melanogaster 61 CG12263 FBgn0034346 FBtr0086691 2 1 1 80 2R 14315253 14315271 TGTTTGCCTACTCCAAGCA 59 14315315 14315402 CCAGATCAATCTGCTGCAG 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086687,FBtr0086689,FBtr0301149 1 3 8 80 2R 14311923 14311941 CATCACCGTCTGGAAGGAG 59 14311985 14312388 GTGCGTTGGTATACAGTGC 59 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 1 2 2 101 2R 14273055 14273073 AAGAGCCTGACGTTATTGG 57 14272917 14272935 ATCATGGGAGCAGTTTACG 57 NA DesignNoJunction Drosophila melanogaster 61 IM23 FBgn0034328 FBtr0086729 3 1 1 65 2R 14270683 14270701 GCCTGATTCTGTCCTTTGC 59 14270572 14270654 TAATCACATTTCCGGCCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dip3 FBgn0040465 FBtr0086734 3 1 1 199 2R 14016216 14016234 CCAAGACGGAGAAGATGCA 59 14016602 14016697 TTGCAGAAATCGGGAGGAG 59 NA Drosophila melanogaster 61 CG5757 FBgn0034299 FBtr0086787 3 1 1 90 2R 13982029 13982099 CAGGCTGTTGGTTGAACTC 59 13981957 13981976 TATCACCTGACCAATGCTGG 59 NA Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 1 2 2 99 2R 13623909 13623927 CTTCGCTACTGCACTTGTG 59 13623773 13623850 GGATCAGATCCATAACTCATTCG 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923,FBtr0086924 2 3 3 191 2R 13358563 13358687 CATCCCAAGTTCAACTTCGT 58 13358841 13358859 CTCAACATGCAGATCGCTG 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 2 4 4 80 2R 13311458 13311541 CTTCGTCATAGGAATCTGCG 58 13311584 13311602 GGAACGTCTAGGCTTTCGA 59 NA Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087053 2 1 2 60 2R 12845654 12845672 GAGTACGAGGCGTATCACC 59 12845693 12845778 TAGTCTAGTTCACATACGCCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051 2 1 2 81 2R 12843174 12843255 AGCTGTGAGACCTAGAAATCTG 59 12843296 12843315 GTACCAGGAGGACGATAAGG 59 NA InUTR Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 1 3 3 80 2R 12507179 12508835 TGGATTTATGGGAAAGGTACTG 57 12508870 12508894 GGTCGTATCAGTAGATAGATATTCC 58 NA Drosophila melanogaster 61 CG7848 FBgn0034127 FBtr0087160 3 1 1 60 2R 12322276 12322294 GGTGTGATAGTGTGCAACC 58 12322234 12322254 AGAACAGGAATACGTTGGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4398 FBgn0034126 FBtr0087157 3 1 1 83 2R 12320346 12320364 GCCAAGTTCTATCAGGCAC 58 12320529 12320547 AACGCTCTGTACATTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)k07824 FBgn0022070 FBtr0087170 2 1 1 60 2R 12233634 12233652 GAGAAGCGCTTCATGAACC 59 12233592 12233613 CAGATGAGTGATTGAACTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147 3 1 5 81 2R 12225863 12225882 CACAAATCCACAAAGTTCCG 58 12225923 12226969 TCTATTTAATCCTGAGCTCTGC 57 NA InUTR Drosophila melanogaster 61 CG30095 FBgn0050095 FBtr0087224 1 1 1 80 2R 12011132 12011150 GTCCAGCGGTATTCATCTC 57 12011192 12011599 CATATGATGTAGGGCACATGG 58 NA Drosophila melanogaster 61 CG8401 FBgn0034069 FBtr0301196 3 1 1 80 2R 11916444 11916463 CACAGGATGGAACACATCAG 58 11916506 11916579 GGCAATGCTGAGAATCTCC 58 NA Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297 1 1 2 127 2R 11822077 11822312 GAATAGCAAGAAGCGCCAC 59 11821968 11821986 AAAGAAACCATTGGCGACC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 1 5 5 80 2R 10790219 10790299 CGACAGTAATGGCAACACAG 59 10790158 10790181 TTAGAATCCAGCAGTATGGATACC 60 NA Drosophila melanogaster 61 Obp50b FBgn0050073 FBtr0087552 3 1 1 85 2R 10258885 10258908 CAAATCCTTTCTGGATAAGTTCCC 59 10258952 10259024 GACATTCATAGCGGCAAGG 59 NA Drosophila melanogaster 61 CG34442 FBgn0085471 FBtr0112746 2 1 1 84 2R 10254944 10255018 TTAAGAAGGTCAGGGTTTCC 57 10255063 10255083 CATTAACTTCACCCAGTTGTG 57 NA Drosophila melanogaster 61 CG8494 FBgn0033916 FBtr0087535 2 1 1 106 2R 10130375 10130484 AGCTAAAGGAAACTACAATGCC 59 10130551 10130569 TGTATTCGCTCGGAAATGC 58 NA Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 3 1 1 90 2R 10049069 10049143 CTACTGTCCGTGTATGGGAC 59 10049196 10049214 GATCAGGGTGCGATTAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8257 FBgn0033900 FBtr0087580 1 1 1 113 2R 10048588 10048665 TGTATAGCCTCAAGGAGGG 57 10048493 10048514 TCCATTTAAACGGACTATCCTG 58 NA Drosophila melanogaster 61 mRpL53 FBgn0050481 FBtr0100285 2 1 1 76 2R 9842487 9842505 CAGAAATCGTCTGCGATCG 59 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13339 FBgn0033871 FBtr0087632 3 1 1 142 2R 9712654 9712727 GCAAGAAAGTTGGACAATTGG 58 9712831 9712849 TATGTTGAGGATGTCGGCA 58 NA Drosophila melanogaster 61 CG6191 FBgn0027581 FBtr0087678 2 1 1 80 2R 9470347 9470367 CCATCTTTGAGAACCAAATGG 57 9469355 9470306 TCTCATAAGTGAAGCACCTC 57 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 2 3 3 80 2R 9407577 9407595 GTCCATGCAACAAGGATGG 59 9407451 9407536 GGTAATAGGTCTCGTTCTCCTC 59 NA Drosophila melanogaster 61 CG30059 FBgn0260475 FBtr0087715 1 1 1 204 2R 9301473 9301491 CCTACCTATCCGATCTGCT 57 9301230 9301305 AACCAGTGCTTATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG17575 FBgn0250842 FBtr0087819 1 1 1 265 2R 8733386 8733468 AATAACAGCAAGTGCATTGC 58 8733140 8733158 TAGATCTCGTTGACGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 1 2 2 99 2R 8668886 8671860 GAACCAACTCAGGGAGGAG 59 8671923 8671941 GATCTCGGAGATCGTCTGC 59 NA Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944,FBtr0087945 1 2 2 80 2R 8396260 8396280 GGTTCTAAGGCATCTGTTCAG 58 8396134 8396220 TGTCAACTGTTGATTCACGTC 59 NA Drosophila melanogaster 61 CG30334 FBgn0050334 FBtr0087949 1 1 1 80 2R 8328735 8328758 GGAGGCGATTATCGAAATTATACC 59 8328628 8328698 GGACATGTTAGCTGGATTCTG 58 NA InUTR Drosophila melanogaster 61 CG8854 FBgn0033702 FBtr0114562 1 1 1 282 2R 8112747 8113224 TACAATGGCTTTGGAGGCT 59 8112483 8112505 AAGCATAGGGATTACAGTAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp6g2 FBgn0033696 FBtr0088009 3 1 1 208 2R 8076771 8076790 AAGATGATCGAGTCACTGGA 58 8076531 8076600 GGTTGAGGAAAGTACTGGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG30022 FBgn0050022 FBtr0289990 1 1 1 89 2R 7275407 7275518 GTTGAAGTATGCCATCAACAC 57 7275338 7275356 ATCACAGATTGACACCCAG 57 NA Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0088196 2 2 3 118 2R 7117000 7117018 CCAGAAGGACTTCTACCCG 59 7116523 7116918 TACTCTGTGCTCCTGTCAG 58 NA Drosophila melanogaster 61 Caf1-105 FBgn0033526 FBtr0088310 2 1 1 80 2R 6355294 6355372 GAGCACCGATAGACAAATGC 59 6355233 6355252 ACTGGGAGTACACATTTGCT 59 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 3 3 3 80 2R 6338168 6338261 GGAAACTCTACGAATGCGAC 59 6338107 6338126 ACGTGGTAACCATTGATGAC 58 NA Drosophila melanogaster 61 CG12902 FBgn0033512 FBtr0088356 3 1 2 80 2R 6242937 6243019 TACGATCTTCTTAGTCGAGTCG 59 6242878 6242897 ACACTGAGCTATGTCAGAGC 59 NA InUTR Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273275,FBtr0088362 1 2 4 86 2R 6138638 6139441 CAACAACGAGAACAACAATGC 59 6138572 6138590 TTCACACGCATAATCCCGA 59 NA Nonspecific Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 1 4 4 80 2R 6097433 6097452 TGTTAATCGCAACCGATGTC 59 6097101 6097391 CCGAACTTTACAGCATCACG 59 NA Drosophila melanogaster 61 Def FBgn0010385 FBtr0088432 3 1 1 79 2R 5942051 5942070 GAAGTTCTTCGTTCTCGTGG 59 5941991 5942009 GATCCACATCGGAAACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adam FBgn0027619 FBtr0088387 1 1 1 106 2R 5857043 5857250 GATGAGGACATCAAGGACAG 57 5857319 5857337 TTTAGCGCCTTATTTGGCT 57 NA Drosophila melanogaster 61 sec24 FBgn0033460 FBtr0088451 3 1 1 80 2R 5764732 5764815 AGATAATTAGGGACACGAGCA 58 5764672 5764693 ATGACAAACTAGATTCACTGCG 59 NA Drosophila melanogaster 61 Or45b FBgn0033422 FBtr0088519 1 1 1 80 2R 5447863 5447940 CCAATAAGAGATCCCTCGC 57 5447984 5448002 TATCTCATTGTGGCGATCC 57 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299917,FBtr0299916 1 5 5 80 2R 5397498 5397732 TGGACTATCCAAGAACCCG 58 5397776 5397794 GAATGGGTATGAACTCGCG 58 NA Drosophila melanogaster 61 CG8029 FBgn0033393 FBtr0088587,FBtr0088588 2 2 2 75 2R 5095834 5095924 AGTCTGGAGTCACATGACG 59 5095963 5095981 CCAGGTACAGATAAGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG8080 FBgn0033373 FBtr0088633 1 1 1 90 2R 4977978 4978055 TGAACGAGGTATTTATTGGCG 58 4977908 4977926 TTGGTCTTGTTCACCACGT 59 NA Drosophila melanogaster 61 Ance-4 FBgn0033366 FBtr0088664 1 1 1 93 2R 4927988 4928070 TATTCCGTATGGCCATCCA 58 4927913 4927932 ATGTCCACAGTATCGTTGAG 57 NA Drosophila melanogaster 61 CG2291 FBgn0033279 FBtr0088802 1 1 1 60 2R 4148558 4148576 AAGAAGATCGACGAAGTCC 57 4148516 4148536 CATGATGGTACTCTGGATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 3 2 2 60 2R 4126193 4126211 GTGATGCCGTTGACAACAG 59 4126233 4126253 TACTTGCTATCCACGTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14762 FBgn0033250 FBtr0088867 1 1 1 80 2R 3898588 3898685 ATATCACCGATAACCCGCT 58 3898526 3898544 CGTCCTTGTTCTTCAGGTC 58 NA Drosophila melanogaster 61 Odc2 FBgn0013308 FBtr0088864 3 1 1 80 2R 3895789 3895865 ATGTTCGAGGAAATAGCGC 58 3895907 3895927 CTCGGAAATGATTCGGATACG 59 NA Drosophila melanogaster 61 CG34431 FBgn0085460 FBtr0112732 3 1 1 60 2R 3834214 3834238 GGAATTAATCTCCATAACTAAGCCC 59 3834256 3834274 GTGACTTCTGTGTTTCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832,FBtr0088833 1 2 2 83 2R 3695077 3695095 CAAATGCTACTCCTGCGAG 58 3695142 3695223 GACTTCCAGCACTGAATCG 58 NA Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088932 3 1 3 91 2R 3629422 3665995 GTATCCCATAATGCAGTGCG 59 3629350 3629368 CGTCGATCTGGTAGACGTC 59 NA Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 2 1 1 204 2R 3549604 3549671 CGGAATCTATCTGCTCCGA 58 3549839 3549857 TTTGATGATCTCCCGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1602 FBgn0033186 FBtr0088960 3 1 1 88 2R 3406001 3406019 AAGAAGAATCCGTCCAGGA 58 3405875 3405951 TGGATGAAACTTGTATGTGGG 58 NA Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 2 2 2 78 2R 3331900 3331918 TGTGAGGAGAAGATTCCGC 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 so FBgn0003460 FBtr0088970 2 1 1 92 2R 3312438 3312456 ATACAAGGAGCTGTACCGC 59 3312511 3312667 ACATAATGCGCTTTCAACCA 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111064,FBtr0111093,FBtr0111070,FBtr0111098,FBtr0111087,FBtr0111063,FBtr0089016,FBtr0111072,FBtr0111084,FBtr0111066,FBtr0111053,FBtr0111090,FBtr0111086,FBtr0111058,FBtr0111050,FBtr0111061,FBtr0089020,FBtr0111082,FBtr0111079,FBtr0111076,FBt 1 59 59 80 2R 3218313 3218492 ACGAGTGGTATGACGAGAC 58 3218251 3218272 TGTACTTCTTTAAGCCATGGAG 58 NA Drosophila melanogaster 61 CG1850 FBgn0033154 FBtr0089022 3 1 1 60 2R 3147919 3147937 ATCTGAAGCAGTTCAACGA 57 3147877 3147896 TTAAGGATGATGGCTTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 phtf FBgn0028579 FBtr0086125 3 1 1 80 2R 2630260 2630352 TGAAATAGTTGCATGGTACCAG 58 2630391 2630411 AATATCCTCTGTTCGACGGTC 59 NA Drosophila melanogaster 61 Trap1 FBgn0026761 FBtr0086149 1 1 1 162 2R 2521449 2521529 GAGATCAACCCAAAGCACC 58 2521305 2521323 GCAGAGTGTTCATGTTGGT 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 tRNA:CR31943 FBgn0051943 FBtr0077818 1 1 1 60 2L 2009156 2009177 GTTCCATGGTGTAATGGTTAGC 59 2009197 2009216 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40465 FBgn0250817 FBtr0100850 1 1 1 60 2L 20253962 20253984 ACATATAGAATGGGTCCAGTCTG 59 20253924 20253942 CCACAGGTACTCTTCTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg2 FBgn0063449 FBtr0079906 2 1 1 102 2L 9894337 9894355 CGAGCACATGGATTTACCG 59 9893864 9894076 AACGTCACTCTTATACAGTCGA 59 NA Drosophila melanogaster 61 CG34137 FBgn0083973 FBtr0110947 1 1 1 60 2L 22152172 22152190 CACCTTGTCCCGAATACCA 59 22152213 22152232 GCTGAATACGAAGCACTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6675 FBgn0032973 FBtr0299905 3 1 1 80 2L 22109149 22109229 ATGGCTACAATAGGCATACC 57 22109271 22109290 TAGAGCATTCATGAACTCCC 57 NA Drosophila melanogaster 61 His1:CG33825 FBgn0053825 FBtr0091829 1 1 1 60 2L 21471474 21471493 AGTTGAGAAGAAAGTGGTCC 57 21471516 21471534 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k14505 FBgn0021856 FBtr0081482 2 1 1 114 2L 21261706 21261781 TCTTCCAGTACGATGACGA 57 21261859 21261877 ATGTTCATGGTCTTCTGCA 57 NA Drosophila melanogaster 61 ppk13 FBgn0053508 FBtr0091448 3 1 1 83 2L 21087934 21087955 CCCAAGCTCAATATGTATTCGA 58 21087735 21087891 TATAAAGACCGTGGCCTCAG 59 NA Drosophila melanogaster 61 CG2478 FBgn0032872 FBtr0081403 2 1 1 80 2L 20651940 20651959 CACTGCGAGGAATAGTTCTC 58 20651819 20651897 CTTGAAAGCTGATAGCCCA 57 NA Drosophila melanogaster 61 CG41072 FBgn0259999 FBtr0100401 3 1 1 109 2L 20257866 20259436 TAAAGCCAACTTTCCCTTCAC 58 20259505 20259525 GTCTTCTCTGACACTCTAGCA 59 NA Drosophila melanogaster 61 CG13970 FBgn0032851 FBtr0089388 2 1 1 60 2L 20103941 20103959 CATGACCGTCCTAGATTGC 58 20103899 20103918 CTCTTCAGACACTTCCTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf13 FBgn0032847 FBtr0081340 3 1 1 82 2L 20093242 20093331 GATCAAGTATGTGGGCACC 58 20093178 20093197 AGGTTTGGCTTATACCTGGA 58 NA InUTR Drosophila melanogaster 61 CG16772 FBgn0032835 FBtr0081302 1 1 1 89 2L 19962743 19962832 CTAATTAGCCAGCTGCTGG 58 19962885 19962903 CTCTTCGCTGTAAAGCGAG 58 NA Nonspecific Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301721,FBtr0301719 1 3 4 97 2L 19956311 19956329 GGAAAGTCCTATCTGGCCC 59 19956389 19956479 TGGTCAACATTGAATGTGGC 59 NA Drosophila melanogaster 61 CG13958 FBgn0032825 FBtr0081295 2 1 1 60 2L 19828734 19828753 GTACAAGATACGCAAACCAC 57 19828776 19828794 TAGGAAACCACTATCCGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13962 FBgn0032824 FBtr0081314 1 1 1 129 2L 19814403 19814481 CTGCTGTAAGCCTTTCGTG 59 19814292 19814312 ACGAATTTGATGGTGAGTGAC 59 NA InUTR Drosophila melanogaster 61 spi FBgn0005672 FBtr0081271,FBtr0081269,FBtr0081268,FBtr0081272,FBtr0100597 2 5 7 115 2L 19571604 19571622 GAAGAAGCAGCCACAACAG 59 19569162 19569183 GGGTTTCTCTACATAGGTATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13081 FBgn0032804 FBtr0081252 3 1 1 86 2L 19541153 19541171 AAGATTCCTGAGCTAGCCC 58 19541221 19541301 TTGAGTTGGAGATCGGCTG 59 NA Drosophila melanogaster 61 CG17568 FBgn0032763 FBtr0081233 3 1 1 80 2L 19181393 19181470 AGTACTTCGAAGTGCAAATGC 59 19181333 19181354 GTTCGCTAATAAGCGTATAGCA 58 NA Drosophila melanogaster 61 CG15170 FBgn0032733 FBtr0081184 3 1 1 97 2L 18990017 18990035 GGAATGTTCCCAGACCCTC 59 18989757 18989959 ATGTAATGGAGTCCACAATGGA 59 NA Drosophila melanogaster 61 Nedd8 FBgn0032725 FBtr0081192 2 1 1 195 2L 18951528 18951706 AAAGTGAAGACCCTGACCG 59 18951291 18951309 AGTGAAGAACGGATCCACC 59 NA Drosophila melanogaster 61 CG10348 FBgn0032707 FBtr0301647 1 1 1 60 2L 18716409 18716427 GAAAGATGCTTCCTAGCCC 58 18716367 18716387 GTGGGTATTAATCCTAAGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10373 FBgn0032704 FBtr0081127 3 1 1 60 2L 18705025 18705043 GTCTGACTGGTGGAAATGC 58 18704983 18705004 AGTATGTACCATTTCTGTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ncm FBgn0086707 FBtr0081088 1 1 1 107 2L 18448329 18448347 ACCACCAATGGAAGTAGCA 59 18448084 18448260 TTCGTCTTTGTCGGTTATCTC 58 NA Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0301144 2 1 3 68 2L 16511439 16519980 ATTCTTCAAACATGGGCCT 57 16511389 16511407 TATTCCAACTGTCCAGCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 2 1 1 62 2L 16336231 16336309 GGAGATCCCATAGACAAGC 57 16336187 16336208 CACGGAATGAATCTTCATTACC 57 NA DesignNoJunction Drosophila melanogaster 61 beat-Ia FBgn0013433 FBtr0080806 1 1 1 80 2L 16078226 16078244 TAATTGCACATCGCGACAC 59 16078287 16079830 ACTAGGGCAGGATTTACCTC 58 NA Drosophila melanogaster 61 CG7653 FBgn0028935 FBtr0080812 3 1 1 99 2L 15877720 15877945 TAACATTGCGAAATGGCTG 57 15877639 15877659 CAGATTCTGGTTAGGATCCTG 57 NA Drosophila melanogaster 61 CG7968 FBgn0028532 FBtr0080551 1 1 1 112 2L 13849608 13849690 AGAACTTTGGTTGCAATGGA 58 13849762 13849783 CATGTCGAACTTAATGGTATGC 58 NA Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080574 2 1 2 60 2L 13782996 13783014 CTAAATGCGCTGGTCAAGG 59 13782954 13782974 TTCCCATTAGTGACACAATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16957 FBgn0032519 FBtr0080523 2 1 1 60 2L 13396013 13396032 GAAACACCCATCGATGTCAC 59 13395972 13395990 ATCCCAACTTGAGGAACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5287 FBgn0032477 FBtr0080436 3 1 1 80 2L 13180030 13180049 AAACTATAACTCCACGACGG 58 13180089 13180170 TACAAGGCACCTATATTCAAGG 58 NA Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 1 3 3 81 2L 13171658 13171750 ATACTCAGTCGGTCAAATCG 57 13171596 13171614 TTTAGCTCCAGCTTGATGC 58 NA Drosophila melanogaster 61 Vha68-1 FBgn0020368 FBtr0080429 3 1 1 67 2L 13001499 13001573 CAATGAAGTTCAAGGACCCG 59 13001451 13001469 GTACAGCTGGTCGTAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5421 FBgn0032434 FBtr0080383 1 1 1 80 2L 12446609 12446779 TATCCTGTGGCAAGACAAGG 59 12446548 12446569 GTCATGAGTATGGAACAGTTCC 58 NA Drosophila melanogaster 61 CG17211 FBgn0032414 FBtr0080336 2 1 1 80 2L 12128404 12128531 GCTTCAATAGAAATCACTACACCC 60 12128567 12128588 GATTAGTTCATCGAGATTGGGC 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 5 6 103 2L 11835160 11835179 CTCGAATATGTCGTTCACCG 58 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 Tsp33B FBgn0032376 FBtr0080265 2 1 1 80 2L 11791202 11791275 TCGTGGTGAAATATCCGTG 57 11791140 11791159 TAATATCGGGAACGTTGTCG 57 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 1 1 2 80 2L 11790101 11790181 ATATCAAGAAGCTACTGCTCC 57 11790277 11790298 GAACAGTCATCATCTTGATCAC 57 NA Drosophila melanogaster 61 CG4788 FBgn0032354 FBtr0080202 3 1 1 60 2L 11179762 11179781 TACTCCTCAAATCCATCCGA 58 11179803 11179822 TCTAAATGGTACTGCACCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4788 FBgn0032354 FBtr0080202 1 1 1 60 2L 11179761 11179781 CTACTCCTCAAATCCATCCGA 59 11179802 11179821 CTAAATGGTACTGCACCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 1 4 4 80 2L 11143208 11143227 CAACCACAAAGACCCTTTCG 59 11143081 11143168 CACCAATGAAGACATAGATGCG 59 NA Drosophila melanogaster 61 CG6724 FBgn0032298 FBtr0080191 2 1 1 82 2L 10768699 10768717 CTCAAAGCTGAATCGGCTG 59 10768568 10768653 CTGATCCCTGGTTTGTCCT 59 NA Drosophila melanogaster 61 CG34160 FBgn0250826 FBtr0112351 2 1 1 109 2L 10579914 10580007 AACAAGGCATCCTCTTCCC 59 10580076 10580098 CGGCACAATAATCGTCTATAGAG 59 NA Drosophila melanogaster 61 CG5188 FBgn0032247 FBtr0080024 1 1 1 88 2L 10428922 10428996 AGTTAAGGGAGATACTGGCA 58 10429047 10429065 GTTTCTTGATCTCCTCGGG 58 NA Drosophila melanogaster 61 CG5022 FBgn0032225 FBtr0079999 2 1 1 80 2L 10345913 10345996 ATAGTTCAAGAGGAGCTGGG 58 10346038 10346057 CCGCAGTGCTAATTCTATGG 58 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 3 4 4 127 2L 10248911 10249109 CCAAGGAATAGTATGCGCC 58 10248802 10248822 GCTTCATTAGCTTGAATTCCC 57 NA Drosophila melanogaster 61 CG5734 FBgn0032191 FBtr0079960 1 1 1 60 2L 10206176 10206194 GGACTCCAGTAGAGATGCC 59 10206134 10206155 GTTGTAGAGCAAATTCAATGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13137 FBgn0032188 FBtr0301684 3 1 1 60 2L 10173976 10173996 TGGAATACAGGACACTTTCAG 58 10174017 10174036 GTTGGGCATCTCTGAAACAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13117 FBgn0032140 FBtr0079864 3 1 1 65 2L 9736869 9736887 GAGAAGTGCATTAGTGGGC 58 9736916 9736934 GGGCGTGTAGATATTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31882 FBgn0051882 FBtr0079853 1 1 1 60 2L 9624985 9625004 AATCAATCCACTGACTCTGC 58 9624944 9624962 GGTACTGGTTGCCTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18088 FBgn0032082 FBtr0079759 2 1 1 80 2L 8968001 8968089 CTACGACAATCTCAAGGCCA 59 8968132 8968150 CACTCGACGATCATTCCCT 59 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 3 3 3 83 2L 8944164 8944247 TACAAGACGGATGAGGGAC 58 8944099 8944119 CAGCACATACATTTGATTGGG 58 NA Drosophila melanogaster 61 LKR FBgn0025687 FBtr0079495 3 1 1 101 2L 7795645 7795785 GACAACGTCATAGTCGAGTG 58 7795563 7795581 GCTTGACCAACTTCTGGAC 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079511,FBtr0079513,FBtr0079512,FBtr0079510,FBtr0079514 1 5 5 80 2L 7696069 7696089 CAAGATTCGAGTATTCCAGCC 58 7695953 7696030 GGAATAGCAATTACCTCACCTC 58 NA Drosophila melanogaster 61 Pvf2 FBgn0031888 FBtr0079423 2 1 1 153 2L 7083307 7083327 GTATCTCATCCGATTGATCCG 58 7074345 7083192 ATAGTCATCGCTCCCATCG 59 NA Drosophila melanogaster 61 CG11070 FBgn0028467 FBtr0079297 3 1 1 82 2L 6659754 6659839 CGTTAAAGGTTCTCCTGGTG 58 6659884 6659902 CCTTAGCATACTAACGCCC 57 NA Drosophila melanogaster 61 CG9550 FBgn0031826 FBtr0079286 2 1 1 80 2L 6497657 6497675 CATTCATCAACATGGCGGT 59 6497716 6497799 TGTTCAGATTTAGGTCTTTGCG 59 NA Drosophila melanogaster 61 CG13989 FBgn0031786 FBtr0079204 3 1 1 200 2L 6160770 6160789 TCTATATGCCACGATTCCAG 57 6160952 6161025 TGGTCGTTAAGCAAATCCA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13993 FBgn0031776 FBtr0079191 2 1 1 92 2L 6069481 6069570 CGACACAAGAGTTTACCAGTC 59 6069624 6069642 CATTTCTCCTGCCTAGCCT 59 NA Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 2 2 2 89 2L 6024381 6024454 TGGAGGGCTATGTAGTGGT 59 6024310 6024328 TCAGACGGATGAAGTGCTC 59 NA Drosophila melanogaster 61 CG14024 FBgn0031697 FBtr0079082 2 1 1 91 2L 5313320 5313401 AACAATCTCGTCTGGTGCA 59 5313070 5313090 AGATACTTCACATCGTAGCCA 58 NA Drosophila melanogaster 61 CG3887 FBgn0031670 FBtr0079000 3 1 1 123 2L 5011328 5011422 CTTTACTGCTACTCCTGCG 58 5011508 5011527 GGTAATAGTTTAGACCCGGC 57 NA Drosophila melanogaster 61 Taf12L FBgn0031623 FBtr0077420 3 1 1 88 2L 4701202 4701284 GCTACGATATTATCTCCAAGACC 58 4701136 4701155 CATATCGCAACCTTGATCGT 58 NA Drosophila melanogaster 61 CG15634 FBgn0031621 FBtr0077378 3 1 1 60 2L 4688330 4688349 CAGTACAGACAAACCGTGTG 59 4688371 4688390 GCATGTAGGCAATAACGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3702 FBgn0031590 FBtr0077477 3 1 1 150 2L 4226876 4226894 CAGAGCATGTCGAAAGCAG 59 4226665 4226683 CAAAGAAGGACTCCATGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34176 FBgn0085205 FBtr0112367 3 1 1 193 2L 4004180 4004199 GACCCGTGATTAAGGTACAG 57 4004355 4004373 TGGATTGTGGTAGTGGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31772 FBgn0051772 FBtr0077489 2 1 1 80 2L 3766033 3766581 CAACAGCTTCCAATTAATAGCG 58 3766621 3766640 AGCATCAGTTTCAAGACCTC 57 NA Drosophila melanogaster 61 CG42467 FBgn0259957 FBtr0300303 3 1 1 82 2L 3701366 3701436 TAGAGATTATTCGGAGAAGTGC 58 3701476 3701497 AATCATAAGTGTATCCATGGGC 58 NA Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 3 1 1 62 2L 3578896 3578914 TTACTCCTGCGACATCTGC 59 3578706 3578875 TATCTATGATCCCTCAGATGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3246 FBgn0031538 FBtr0077572 1 1 1 96 2L 3461506 3461524 GCCAATCTGGACATGAAGC 59 3461371 3461448 CACCGTTGAATCTCATTTCCT 58 NA Drosophila melanogaster 61 CG34175 FBgn0085204 FBtr0112366 3 1 1 62 2L 3398315 3398334 AATCCTCCTTGCAAAGAAGC 58 3398354 3398377 CTCTTTATTCTCGGACTTCTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hydr2 FBgn0014906 FBtr0077576 3 1 1 82 2L 3167125 3167208 TCAACGAACAGGAGGATGAC 59 3167253 3167271 GAAGGTGCGAATGTACACC 58 NA Drosophila melanogaster 61 CG17261 FBgn0031501 FBtr0077656 2 1 1 149 2L 3043096 3043191 GCAAATGTGCTCTTCTGTG 57 3043304 3043322 GTCTTGGTCATCGAGAGGA 58 NA Drosophila melanogaster 61 CG17219 FBgn0031494 FBtr0077650 3 1 1 192 2L 3029925 3029997 AGGACTACAACAAAGATGTGC 58 3030146 3030169 GTCTCAGAGGTAAGTATTAGATCG 58 NA Drosophila melanogaster 61 CG3123 FBgn0031465 FBtr0077723 1 1 1 60 2L 2824790 2824808 GCCTTGAACACCTATCCCA 59 2824748 2824768 CCATCTCCGAAACACTAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 3 4 4 81 2L 2738319 2738337 CACGGAATACATGCGACTG 59 2738380 2738464 CTTCAGGTAGGTAAGAGTCCA 58 NA Drosophila melanogaster 61 Or23a FBgn0026395 FBtr0077698 1 1 1 80 2L 2654794 2654812 AAGACTCTGGAGGAGAACG 59 2654851 2654925 GGTCACATCGAGTAATCTATACAG 59 NA Drosophila melanogaster 61 eys FBgn0031414 FBtr0114370 2 1 1 80 2L 2353694 2353780 CGAGGAGGTAATTCGATCCC 59 2353821 2353841 TATAGATATGGCCAGCGAACC 59 NA Drosophila melanogaster 61 robl22E FBgn0028570 FBtr0077800 1 1 1 61 2L 2290589 2290607 GAGGAACTATTGAAGCGCT 57 2290546 2290564 TTGTCCACCACAACTATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ser12 FBgn0011832 FBtr0077806 3 1 1 60 2L 2250956 2250977 TGAAGACTACGTATCTTCCACC 59 2250917 2250936 GTCCACCAGTCTAATTACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31686 FBgn0051686 FBtr0077752 1 1 1 60 2L 2244994 2245013 ACAGTACCTTCATCTTCGTC 57 2245034 2245054 TGAATGCCTTAGAAGTCTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10880 FBgn0031398 FBtr0077843 3 1 1 123 2L 2215596 2215614 GATCACCGAAGAGATTGCC 58 2215436 2215454 AATAGTAGCCAGGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7289 FBgn0031379 FBtr0077815 2 1 1 67 2L 1982485 1982551 TCCAGAACAGAAGGATCCC 58 1982582 1982600 AGTTCTGGAGGATGAAGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 1 1 1 60 2L 1352719 1352740 GGTATTAGCTATTGCATCTTCG 57 1352624 1352698 TATAGACATGACGCGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 fliI FBgn0000709 FBtr0077192 2 1 1 99 X 21214671 21214814 GCTTACAGATTCTCAACGAGG 58 21214874 21214893 TAGTTCATGTACTCGGCGTC 59 NA Drosophila melanogaster 61 CG4318 FBgn0030455 FBtr0301690 2 1 1 60 X 13048638 13048660 GGTCAGTGAGATGAATTATGAGG 58 13048600 13048621 CTCAATCAGTTCAACATCGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15727 FBgn0030410 FBtr0073709 1 1 1 133 X 12523596 12523617 GAACGAAGGAATAAACAAACCG 58 12523420 12523438 TACTGCTTCATGTTCCTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15317 FBgn0030137 FBtr0071371 3 1 1 100 X 9450404 9450423 TCTATGCCTTAAGTCTGCGA 58 9450269 9450341 CTTGATTGGAACCCGTGAC 58 NA Drosophila melanogaster 61 pdfr FBgn0260753 FBtr0070436 1 1 1 80 X 2469460 2469480 GGAACTATAATCTCACGCCCT 59 2469519 2469606 CCAGGAAACAGAAGTTTAGCAG 59 NA Drosophila melanogaster 61 trr FBgn0023518 FBtr0070362,FBtr0070363 1 2 2 80 X 1776708 1776785 TACTTGGCGAGATCTAAGATCC 59 1776649 1776670 GTACTCGATTATCATGGTGTGC 59 NA Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 3 2 2 178 3R 17847237 17847318 CAGGAGAAGATTGTCGCCT 59 17847077 17847095 TTCCGCCAGTACTTGTCTG 59 NA Drosophila melanogaster 61 psidin FBgn0243511 FBtr0083829 3 1 1 85 3R 15851377 15851460 AGTTTAGAGATGCTATCGCTG 57 15851505 15851525 TTCTTGGTCTTGGTCTTTGAG 58 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400,FBtr0083783 2 2 2 86 3R 15477480 15477504 GCTATTCAGTAGCATTAGCAATAGG 59 15477547 15477678 ATTCCTGTCCTATAGCGCAC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0301345,FBtr0082256 3 6 8 90 3R 6359696 6359714 AGAGAATGGTCCTCACCTG 58 6355176 6359643 CGAAATTGTCAGGACTACCG 58 NA Drosophila melanogaster 61 CG11977 FBgn0037650 FBtr0300742 2 1 1 81 3R 4823473 4823491 GGGCCATACTGTATTCCGA 59 4823535 4823616 GTAATCGGGTGGCTTTACTG 58 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 3 3 3 89 3L 2723388 2723473 AGGCTATAGTGGTGAAGCAG 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 3 6 6 80 3L 982096 982188 CCATAATGGTTGTTATGACGCT 59 982228 982247 CCAGACCATAGAGATGCAGG 59 NA Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 2 2 2 134 2R 19576225 19576468 GGATGTAAACACATTCAACGAG 58 19576561 19576581 ATGTAGAACATGTTCGATCCC 58 NA Drosophila melanogaster 61 asrij FBgn0034793 FBtr0071902 2 1 1 77 2R 18774704 18774722 CAATCTGGACACGGAATCG 58 18774763 18774842 ATTGAACCAGAGTCCAGGG 59 NA DesignRelaxed Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 1 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087558 1 1 2 202 2R 10258466 10258484 ATAATTCCCTTTCGGGCTG 57 10258224 10258243 TCTAAACGGCACTTGATGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13231 FBgn0033580 FBtr0088203 3 1 1 266 2R 7033874 7034025 TGAAATTCACTCTGCTGCT 57 7034255 7034273 GATAGGACACCGAAGACAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG30345 FBgn0050345 FBtr0088584 2 1 1 80 2R 5037271 5037289 TAGTAAGCCTCTTCCTGGG 57 5037332 5037417 AAAGGTAGCCTGTAAACGTG 58 NA Drosophila melanogaster 61 CG31668 FBgn0051668 FBtr0113412 3 1 1 80 2L 2205761 2205782 AATGACTATATGATGGGATCGC 58 2205631 2205720 CACCGCAGATATACAGCTC 57 NA Drosophila melanogaster 61 CG4577 FBgn0031306 FBtr0077957 2 1 1 122 2L 1139059 1139133 AGCGAAGAGTGAGTAGCTC 58 1139219 1139237 TCCGATTGGCATAGGTCAG 59 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 2 3 3 81 2L 740677 740807 AATACTAGGACTCTCCTTACGG 58 740617 740635 CATAAACAGTTCGCCAGGA 57 NA Drosophila melanogaster 61 Spp FBgn0031260 FBtr0078080 1 1 1 109 2L 544260 544345 CAAGCTGAAGAAGTCAACGG 59 544170 544188 TGAAGAACAGGTACAGCCC 59 NA Drosophila melanogaster 61 CG33992 FBgn0045202 FBtr0100045 2 1 1 60 2L 327805 327824 AATACATGGAGTGCAAGGAC 58 327764 327784 TGGATTGGATCACACTTATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spen FBgn0016977 FBtr0078123,FBtr0078121,FBtr0078122 2 3 3 82 2L 185013 185031 CAGTCTTCGGGCAATTGTG 59 185074 185164 TTTGAAGAGTTGCTGGTTACTG 59 NA Drosophila melanogaster 61 CG34137 FBgn0083973 FBtr0110947 2 1 1 60 2L 22152356 22152375 GTATTCTTCAACGCGATCCC 59 22152398 22152416 GGGCTTAGCCCTATTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM18 FBgn0067903 FBtr0091694 1 1 1 80 2R 19489243 19489264 TTCGTAAGCATGGACATTAACC 59 19489131 19489205 AACCAGATAACTTCTGATGGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 PGRP-SC1b FBgn0033327 FBtr0088708 2 1 1 60 2R 4601490 4601508 CACTCACATCTGGAACGAG 58 4601531 4601550 TCAGGAACCACTCTAACCAG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0079620,FBtr0273381,FBtr0079621 2 4 4 91 2L 8252658 8252677 GACTCCAACTGTTAGGATCG 57 8252525 8252604 CTTTGCTGCCTATCAAGGT 57 NA Drosophila melanogaster 61 r2d2 FBgn0031951 FBtr0301329,FBtr0079489 2 2 2 125 2L 7800629 7800721 ATAGAGGCCCTTGGAAATGG 59 7800809 7800827 ATCACCCACAGTCGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 1 3 3 83 X 16310693 16310711 GAAGAGTCCAAGCAGTACG 58 16310758 16310836 TATATCCAGCCGTAGAGCA 57 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232,FBtr0110973,FBtr0083233,FBtr0110974,FBtr0083229,FBtr0083231 3 6 6 80 3R 11895869 11895888 GGCTTTACAGCGAATAGCTG 59 11895747 11895826 AGGCTTTCATCACTTTCGC 58 NA Drosophila melanogaster 61 CG42562 FBgn0260764 FBtr0301266 1 1 1 80 2R 13573540 13573622 ATTCCCTGAGGATTGATCTCG 59 13573661 13573682 CCTTAACTTGAAGCACATCTGG 59 NA Drosophila melanogaster 61 CG1801 FBgn0031171 FBtr0300938 1 1 1 80 X 21179300 21179322 ACAGCCATGGATTCTATCTAGAG 59 21179169 21179261 CCTTACGCAAATTCTCCTCC 58 NA Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 2 2 2 80 X 21195590 21195746 GCTTCCAGTATTCGATCGG 58 21195788 21195808 CACCTTAACGTTCTCTAAGCG 59 NA Drosophila melanogaster 61 CG42302 FBgn0259198 FBtr0299682 1 1 1 67 X 18619512 18619530 TATGTATCGCTATGCCGGA 58 18619463 18619481 ATCCATACAGTTGGCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8239 FBgn0030683 FBtr0074087 3 1 1 165 X 15643975 15644055 GAATGAAGTTCATCGATTGGC 58 15644180 15644200 TATATCGTAGAGTCGGGACAG 58 NA Drosophila melanogaster 61 CG5599 FBgn0030612 FBtr0073964 2 1 1 81 X 14981974 14982055 ACATAGGAGTGATTGGCGG 59 14982100 14982118 TTGGTCCTACCCATAGCAC 58 NA Drosophila melanogaster 61 CG1703 FBgn0030321 FBtr0073520 3 1 1 152 X 11507156 11507174 ATGACAAAGAAGGGTGGTG 57 11507290 11507380 TAGATCGTTACCCTTGGCT 57 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 3 5 5 157 X 11027710 11028925 CCATGGTATACAAATACACAGCC 59 11027575 11027593 GTAGATGCCGTTCTTGCAG 59 NA Drosophila melanogaster 61 feo FBgn0030241 FBtr0073410 2 1 1 60 X 10747699 10747719 GATCTCACACTTAAGAGCCAG 58 10747659 10747679 ACCAGTCGTTGTAGTAGTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 3 3 3 86 X 10641029 10641047 CAACTCCGTCTACCAGGTG 59 10641097 10641528 CGTGTTACCACATTGCCAC 59 NA Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127 1 1 2 122 X 7849837 7849856 GTGTTGTGGACCAATAAGGA 57 7849598 7849616 TTCAACTCTGTCACCTGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 2 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ctr1A FBgn0062413 FBtr0070951 1 1 1 97 X 6559635 6559653 AATATCGACCTGTGACGGG 59 6559714 6560895 CAGCATCGAAGGTTGAACG 59 NA Drosophila melanogaster 61 Ubi-p5E FBgn0086558 FBtr0070933 1 1 1 82 X 6172526 6172544 TTTGTGAAGACCCTCACTG 57 6172462 6172480 TGGATCTTTGCCTTAACGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3160 FBgn0029789 FBtr0070847 1 1 1 80 X 5581341 5581360 ATAACACCACGCTCAATCCT 59 5581212 5581301 AGGAGTACTCATAGCTGATTCG 59 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 3 3 3 105 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038390 2038411 CAATGAACTGGTTGATCTTCTC 57 NA Drosophila melanogaster 61 east FBgn0010110 FBtr0070326 1 1 1 83 X 1912899 1912917 TTTGGCCTCTATGACACCC 59 1912964 1913101 CTTCTCCTCGTTGGCTAGG 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 3 3 8 61 X 550407 550425 GTCACTATAGCCGTTTCGT 57 551148 551167 AAGATTGCAACTTGATGCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Appl FBgn0000108 FBtr0070109 2 1 1 80 X 466094 466190 AAGTCAGAAACGCCTTGAG 58 466234 466252 TACTTCTCCTCGAGATCGG 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305b FBgn0082975 FBtr0113591 2 1 1 73 3R 24428068 24428087 TACTGACAAATTGACGGGCT 59 24428120 24428141 CGCTTAAATTAATCTCACAGCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RNaseMRP:RNA FBgn0065098 FBtr0091662 3 1 1 60 3R 19555864 19555884 ATATGGACGAGTTGGTAGGAC 59 19555824 19555844 GGTTTCTCAGACGAGAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 3 1 2 67 3R 27892097 27892115 AGGAGTACACGTTGGATCC 58 27887231 27892067 AAGCTGTAGAGGAGCTTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 2 2 2 96 3R 27079869 27079887 GAGCCGAGTTACTTGTGGA 59 27079736 27079810 ATCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 1 1 1 127 3R 26517468 26517575 CTACCTTCTGTCAGTCGGG 59 26517664 26517684 TTAAAGAGGAGCATCTTGGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9737 FBgn0039758 FBtr0085639 1 1 1 80 3R 26068275 26068295 TGATCGTCATATCCTAACAGC 57 26068151 26068234 AAACGCACATGCTTTAATCC 57 NA Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587,FBtr0085586 2 2 2 92 3R 25953646 25953664 CCTTGCAGTGAGGATAGGG 59 25953521 25953539 GGAGTACACGGGATAGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG2014 FBgn0039669 FBtr0085440 3 1 1 68 3R 25342133 25342151 AATGTACGGAATCCTGCAG 57 25342183 25342201 TTCCTGTACCACATCTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Noa36 FBgn0026400 FBtr0085320 3 1 1 90 3R 24424491 24424509 CTTCTGCAACGGATTCCTG 58 24424327 24424348 CGATTGACACTTGTAGTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 1 5 5 124 3R 23101498 23102023 ACATGACGGTATTTGGGCT 59 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 3 2 2 161 3R 19779097 19779182 TGGAATAACGTTGTCCGCT 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 CG13826 FBgn0040590 FBtr0084391 2 1 1 82 3R 19048838 19052176 GGTACCAAGCGTAGTTGAC 58 19048774 19048792 AGGCAGATCCTCTAAGTCG 58 NA InUTR Drosophila melanogaster 61 Gld2 FBgn0038934 FBtr0084200 1 1 1 82 3R 18040635 18040905 AGTCCAACATTACAATGCCAG 59 18040949 18040967 GAATTCGCGCCAATAACGA 59 NA Drosophila melanogaster 61 CG6028 FBgn0038924 FBtr0084186 3 1 1 109 3R 17850764 17850869 CTGCATTGGTCTGAACTACC 58 17850674 17850692 TATCTTGAGGACCCACCAG 58 NA Drosophila melanogaster 61 CG17272 FBgn0038830 FBtr0083992 1 1 1 98 3R 16649577 16649664 CATTGATGAGTTCCGTGAGTG 59 16649436 16649454 GAAAGACCCAAAGAACGCA 58 NA Drosophila melanogaster 61 Hs6st FBgn0038755 FBtr0083846 2 1 1 80 3R 15763022 15763042 GCATCGAGAAGCTAAACAGTC 59 15756241 15762980 TCAGATGTTCGAAACGCTG 58 NA Drosophila melanogaster 61 Cpr92A FBgn0038714 FBtr0083811 1 1 1 121 3R 15424203 15424555 TGCTGAAGATTTCCCTGCT 59 15424100 15424120 TGCATATCCTCCATAGTGGTG 59 NA Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 3 3 3 115 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204583 14204602 CTCGGTCTTCACAATGTCAG 58 NA Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 1 1 1 81 3R 12149495 12149514 ACTGTTGGTTTGTAGGTGTC 58 12149557 12149649 ACATAGTAGACCAGCTTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968,FBtr0301960 2 3 13 145 3R 11121256 11125839 AATACGAAGAGGTGGCCAG 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG14857 FBgn0038262 FBtr0082993 1 1 1 80 3R 10629451 10629543 GGAAACGAACAATAGACAACTG 58 10629582 10629602 TCAAAGGATAGCATGGATTCG 58 NA Drosophila melanogaster 61 Cyp313a1 FBgn0038236 FBtr0082954 1 1 1 80 3R 10347831 10347899 AAATGTTGGACAACGTGGT 58 10347941 10347961 TGATCACAATGTTCGATTCGG 59 NA Drosophila melanogaster 61 CG31469 FBgn0051469 FBtr0082844 2 1 1 80 3R 9535091 9535170 CATACTTTATTCAAGGCATGGG 57 9535032 9535051 AATGTTGCAGAAATCGTTCG 57 NA Drosophila melanogaster 61 CG9269 FBgn0038161 FBtr0082794 2 1 1 60 3R 9442013 9442031 CTACGGCAATCTGTATGGC 58 9442054 9442073 AGGACGACCATAATATCCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD6 FBgn0010042 FBtr0082573 3 1 1 60 3R 8203433 8203452 CAGATGGTATAAGAACGCCC 58 8203473 8203493 AATTCTTGCCAAGTTCTCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4115 FBgn0038017 FBtr0082568 2 1 1 94 3R 8186205 8188298 GCGAGAATGTGAAATACATCTG 58 8188353 8188371 CCAACCGTTGATGTTTGTG 57 NA Drosophila melanogaster 61 CG14739 FBgn0037987 FBtr0082553 1 1 1 202 3R 7874913 7874931 GTTAGAGTAGGCGGTAGGT 57 7874670 7874688 TGTTCACCAGCAATTGCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sad FBgn0003312 FBtr0082475 1 1 1 83 3R 7703237 7703255 ATTCCAAGGGTGAAGGGAC 59 7703301 7703796 GTACTTATGAAGGTGCGTGG 58 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082474,FBtr0082473 1 2 2 84 3R 7645692 7645710 GTCAACGACATTGCACTGG 59 7645758 7645776 AGTAGGGATAGAGGGTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18476 FBgn0037931 FBtr0082443 3 1 1 91 3R 7503527 7503615 GAAATCAATCTGGATGCAACTG 58 7503457 7503475 ACATAGCAATAGGCACCCA 58 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082277 1 1 4 91 3R 6610563 6610582 GTAGAGATGTCTTCGGGTCG 59 6610635 6611133 GGAGTTATCCTGTAGCGTCC 59 NA Drosophila melanogaster 61 CG3996 FBgn0037800 FBtr0082224 3 1 1 81 3R 6066595 6066613 GGACCTGGTCCTTATCGAG 59 6066656 6067271 GATCACACGTTCTTCTAGCAG 58 NA Drosophila melanogaster 61 CG32939 FBgn0052939 FBtr0082085 2 1 1 60 3R 5518969 5518989 ATGTCGTTCTCGAATAAGTCC 58 5519011 5519091 TGAACTGCAGGGTGATCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11977 FBgn0037650 FBtr0300742 3 1 1 81 3R 4823530 4823611 TATTCCAGTAAAGCCACCCG 59 4823655 4823673 AAATTTGAAGCCGCAGGTG 59 NA Drosophila melanogaster 61 CG15864 FBgn0040528 FBtr0300372 1 1 1 134 3R 4075718 4075739 GATTAATATTACCGTTACGCCC 57 4075834 4075909 TTCGTGAGCACGTATTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42564 FBgn0260766 FBtr0301268 2 1 1 114 3R 2201037 2201058 AGTTGGAGGATATCCTTAGGGA 59 2201133 2202119 TTGTACTTCGGCGACTGAG 59 NA Drosophila melanogaster 61 Osi7 FBgn0037414 FBtr0078597 1 1 1 64 3R 2075264 2075282 CAGCTTCCTGAACTCACAC 58 2075310 2075328 TAACAGCCTGCACAATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0100617,FBtr0078906,FBtr0078905 1 4 4 80 3R 150465 150485 GTTGAAGAACGTCAGTGTTCC 59 150522 150606 CATTACTTGGGTCTTTAGATCGTC 59 NA Drosophila melanogaster 61 CR15821 FBgn0035311 FBtr0072914 2 1 1 80 3L 2172684 2172758 CCAGTTACCGAATGCAAGG 58 2172622 2172642 TTCCGTTCGATTTCCATACCA 59 NA Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 3 2 2 92 3L 21504342 21504419 CCTGATATGGATCGAAGCTG 58 21504474 21504492 AGAAATCCGACGAACAGGA 58 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078348 1 2 3 106 3L 21426793 21428134 AATGGAAAGGCACTAGCAG 57 21428204 21428222 CTTGAACAGAAAGCTGGCT 58 NA InUTR Drosophila melanogaster 61 CG17145 FBgn0036953 FBtr0074823 1 1 1 112 3L 20214958 20215038 AAATTTGGTGCCATACTGGG 58 20215112 20215131 CGGATCACCGTATTATTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 3 6 6 145 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684741 19684911 GGATCCTCATCGACAGAGC 59 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 1 6 6 143 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684743 19684913 ATCCTCATCGACAGAGCAG 59 NA Drosophila melanogaster 61 Galpha73B FBgn0010223 FBtr0075354 1 1 1 80 3L 16656792 16656810 GAACGATGTGGGTATTCGC 59 16656637 16656749 TTGTCCAGGAAGTATTTCGC 58 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 2 2 2 80 3L 16392306 16392326 TAAAGGTCGAAATTCCGAGGA 59 16392177 16392264 AGGAGATCAGCGAGTTCTG 58 NA Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 1 2 2 93 3L 15972040 15972061 CTGCAAATGAGTTGTATTCAGC 58 15972112 15972414 GCTTGGTTTATCTTCTTAGCGT 59 NA Drosophila melanogaster 61 Hml FBgn0029167 FBtr0075753 3 1 1 80 3L 13839976 13839994 CGATAAGGAGAACGAACGG 58 13840035 13840136 TAAGTGTATCGTGCACTAACTG 58 NA Drosophila melanogaster 61 CG12520 FBgn0036324 FBtr0113169 1 1 1 107 3L 12895124 12895226 TTCGTGCTAGAGACGACAG 59 12895035 12895053 AACATTTCACCAGAGCTGC 58 NA Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0300028 2 1 2 214 3L 12527097 12527173 TCAACCAGCTAAATGGCAG 58 12527348 12527369 TCTTAAGTGTAGCATAACAGGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32050 FBgn0052050 FBtr0076338 1 1 1 60 3L 9819555 9819573 CTCCGACAGATTTACACCC 57 9819594 9819615 CCTTAATCTCTTTGGAAAGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 1 2 2 80 3L 9406348 9406369 TATTCGAGCTATACGACAACTC 57 9406408 9406501 TAAAGTTGAATCTGCAGAGGG 58 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527,FBtr0076525 1 4 5 97 3L 9067915 9068167 ATCCTGCTAGTGGATCGAC 58 9068228 9068246 TTCCCTGTTGCTGATAAGC 57 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 3 7 7 80 3L 8900033 8900178 GTTTACGTGATAGGATGGTGC 59 8899973 8899991 CGCATCTCCTGCAAATGAG 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112599,FBtr0112602,FBtr0112600 1 5 5 123 3L 8097910 8097989 CTTCTCAAGGTGCATCTGC 58 8098073 8098094 CTAAGACAAAGTTCTTTGCCTG 57 NA Drosophila melanogaster 61 CG32376 FBgn0052376 FBtr0076827 3 1 1 60 3L 7535524 7535542 GGATCAGAAAGTGAGGGAC 57 7535482 7535505 CATTGTCCTTATAGTATCCTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7386 FBgn0035691 FBtr0076999 2 1 1 103 3L 6184215 6184291 CGAATGCAAGGTTTGTGAC 57 6184355 6184376 GTTTATAAGTTTCCAGAGCCCT 58 NA Drosophila melanogaster 61 CG5592 FBgn0035645 FBtr0077029 1 1 1 167 3L 5891643 5891720 GTCACCAAGTTGGCTTATGTC 59 5891849 5891867 CTGGTGTACTGCTTTCCCA 59 NA Drosophila melanogaster 61 CG32418 FBgn0052418 FBtr0077119 3 1 1 118 3L 5770231 5770311 AAACGCATAGAGTTTCTCAGTG 59 5770134 5770152 TTTACCTCCTGCCGTATGC 59 NA Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 3 2 2 96 3L 4538172 4538264 CTATGTGAAATATCCCAAGGTGG 59 4538320 4538338 GAACTTGATGCTCAGTCCG 58 NA Drosophila melanogaster 61 CG15022 FBgn0035547 FBtr0073333 2 1 1 91 3L 4460171 4460252 AGGAAATGAAACCCATGCTG 58 4460099 4460117 GTAACCTCCTCCGTACAGG 58 NA InUTR Drosophila melanogaster 61 Cip4 FBgn0035533 FBtr0073339,FBtr0113138 1 2 2 80 3L 4327037 4327055 ATTAGAGGCACGATGAGTG 57 4325402 4326994 CAGGGAATTCTTATTGCTGC 57 NA Drosophila melanogaster 61 CG32488 FBgn0052488 FBtr0073008 3 1 1 200 3L 3015473 3015491 TTTAGATGCCGCCTATCCC 59 3015227 3015311 ATATCCGTCTGCAGTGTATCG 59 NA Drosophila melanogaster 61 Aats-pro FBgn0027082 FBtr0072948 1 1 1 93 3L 2651277 2651356 TTCCTCATGAGTCCAACCC 59 2651202 2651220 GGAAGAGTCTCAAGGGCAG 59 NA Drosophila melanogaster 61 Cpr62Bb FBgn0035280 FBtr0072786,FBtr0299562 2 2 2 80 3L 1834921 1834940 TTCGTTATCCTTTCGTTGGC 59 1834675 1834882 TGGATGATCATAGTAATCCAGGG 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0100219 2 1 5 100 3L 1656992 1657011 TCTATTTCCTCTGAGCTGCG 59 1655010 1656929 TCCTGAGTCAGTTTGGACG 59 NA Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813,FBtr0072814 3 2 2 99 3L 1638854 1639059 CTTCAAGCACAATGCTTGG 57 1638773 1638791 CGCTTCCATCTTTGAGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12502 FBgn0035171 FBtr0300345 2 1 1 109 3L 869859 869946 GAGTTTCGGAGTCAGTTATCTG 58 870015 870034 GACTGATCCAGACTCTCCTC 58 NA Drosophila melanogaster 61 snoRNA:Or-CD1 FBgn0086027 FBtr0114303 1 1 1 65 2R 18084853 18084871 GACGATTGGGTTCGATCTC 58 18084806 18084826 TCGTAACATATTGGTTGGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1389b FBgn0083045 FBtr0113526 3 1 1 60 2R 17221729 17221749 TTTCGTATGAGGCTTTCAGAC 58 17221771 17221789 AGTGATACAATCGTGGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33397 FBgn0053397 FBtr0086389 1 1 1 60 2R 15637477 15637495 ATACATCGGTTCTCGTCCG 59 15637435 15637453 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33404 FBgn0053404 FBtr0086396 1 1 1 60 2R 15634917 15634935 ATACATCGGTTCTCGTCCG 59 15634875 15634893 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300253,FBtr0300231 3 3 4 92 2R 10510484 10510503 ATTCATTTGTTGGAAGCGCA 59 10510740 10510931 TGGGTCACATCATCTTAGGAC 59 NA Drosophila melanogaster 61 CR30066 FBgn0050066 FBtr0087563 2 1 1 155 2R 10178006 10178024 GGCTGAATCAGAGATACGG 57 10177833 10177887 TTTGCCTTTAGTTGGTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2736 FBgn0035090 FBtr0072403 3 1 1 98 2R 20862237 20862256 TACTTCCTGTGGGAGTTCAC 59 20862096 20862178 CTCTTTGAGAGCGTTGTAGAG 58 NA Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0072408 2 1 3 175 2R 20849262 20852104 AGACAAGTCGAAACTGCCT 59 20849003 20849021 GATGATGTCAGTGCTGTCG 58 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 1 2 2 90 2R 20828706 20828724 AATTCCCTGGACAACCTGG 59 20828567 20828652 ATGGAACGGTTCCTTCTCC 59 NA Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 3 2 2 89 2R 19132120 19132189 AGATGACCGCATTTACTGCT 59 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 CG13544 FBgn0034826 FBtr0071973 1 1 1 80 2R 19027278 19027350 AACTCAAACTGCATGTCGC 59 19027216 19027234 TTGCGTCTTAACCCTTCCA 59 NA Drosophila melanogaster 61 CG34207 FBgn0085236 FBtr0112400 3 1 1 60 2R 18217201 18217223 GTTTGAGTACTCCTTCATGTTCG 59 18217163 18217183 GGGCATCCCTAGAAATTTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11159 FBgn0034539 FBtr0086248 2 1 1 95 2R 16543765 16543852 TATCAAATTGGGTTTGCCTGG 59 16543690 16543708 GAAACAGACCGTAGCTGAC 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 2 3 3 94 2R 16148244 16148325 TCACAATGTTATCCAACGAAGC 59 16148377 16148398 AATGTTCTTGGTCTTCGAATCG 59 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 3 1 2 221 2R 14419977 14420193 AGATTGGTCTCACCACACC 59 14420377 14420396 CAGAGGAATGATGGTTCCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CheB53b FBgn0261293 FBtr0091479 3 1 1 80 2R 12356189 12356265 CTTTCGAGTCAAAGGAAGTGTC 59 12356304 12356324 CTGTGCAATGGTATTCCACTG 59 NA Drosophila melanogaster 61 CG15711 FBgn0034122 FBtr0087167 1 1 1 60 2R 12251234 12251255 AACTGAATTTCAACGGCTATGG 59 12251195 12251213 AATAGTTCCTCGGTGACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 1 1 1 79 2R 11181047 11182510 GACCATCATCAACTATTCCGC 59 11180988 11181008 GGTTCGATGTGAATTTACCCA 58 NA DesignNoJunction Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 1 1 1 89 2R 10049070 10049143 TACTGTCCGTGTATGGGAC 58 10049196 10049214 GATCAGGGTGCGATTAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 AQP FBgn0033807 FBtr0300286,FBtr0087766 2 2 2 67 2R 9100934 9101266 GCTCATTATTGTGGCCGAC 59 9100885 9100903 AGATGGTCAGCAGGAACAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 fra FBgn0011592 FBtr0087822,FBtr0087821 2 2 2 80 2R 8447316 8447402 AGTGTACTATTCCGAGAACGAC 59 8447443 8447461 CGCAACTCGGTAAGAACTG 59 NA Drosophila melanogaster 61 CG30051 FBgn0050051 FBtr0114521 1 1 1 113 2R 8323748 8323830 CATTTCTGCTGAGCATCGA 58 8323907 8323925 AAACCTGGAAGTTGGAGCT 59 NA Drosophila melanogaster 61 jeb FBgn0086677 FBtr0088021 2 1 1 88 2R 7980402 8004112 CACAAATCGAGTGTCCTACC 58 7980333 7980351 GTCTATGCAGCGGTATCTG 57 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 3 1 1 256 2R 6308355 6308373 AAATATCGGAACCGAGGCA 59 6308059 6308137 GGAGGTAGGCAATTTGATGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 1 3 3 81 2R 5982411 5982429 CGATCTCATCTCCGGAGAC 59 5982473 5982562 TGAGGCACCACATAGATAGC 59 NA Drosophila melanogaster 61 CG8788 FBgn0028955 FBtr0088581 2 1 1 86 2R 5027791 5028948 ACTTCTACATCATGTGGCG 57 5028997 5029016 CTTTAGACACGGATCAGGAC 57 NA InUTR Drosophila melanogaster 61 CG15237 FBgn0033104 FBtr0086212 1 1 1 92 2R 2697134 2697152 TACTGGTTGGACATGGCTC 59 2697002 2697078 CTTAAGGGACTCTCGCCAG 59 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 1 2 2 135 2R 1846598 1846616 AATTTGTTCGCCTCCATGC 59 1846712 1846791 TGTAGCTCTCGATGAAGAAGAG 59 NA Drosophila melanogaster 61 CG1298 FBgn0033032 FBtr0086037 1 1 1 60 2R 1559940 1559958 AACGAAATCAGCAATCGGG 58 1559979 1560000 GTCCCTGATTCTGGTAATACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42545 FBgn0260718 FBtr0301174 2 1 1 70 2L 21577312 21577331 TTATGAACTAGCCGAGGAGC 59 21577261 21577279 ATACATGACCTGAGCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tif-IA FBgn0032988 FBtr0085955 1 1 1 80 2L 22253618 22253636 GTAATTCGACATGCTGCGG 60 22253678 22253758 GAAAGTAACAGTGCTAAGCGG 60 NA Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0081476,FBtr0110895 1 2 2 80 2L 21207153 21207230 GCAGTTCAGACATAATTGCC 57 21207270 21207291 TAGATTCATTGGGTATCCAGTC 57 NA Drosophila melanogaster 61 CG15475 FBgn0032867 FBtr0081381 3 1 1 60 2L 20614824 20614842 CAGACCATCCAAGACCCAG 59 20614863 20614884 CGCATTATCGTGAATGGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081264 3 1 3 178 2L 19581889 19582014 CCAAACAACTATCTCGCTATCTC 59 19581733 19581751 AGTGGATCATCGGGTTCAG 59 NA Drosophila melanogaster 61 ScpX FBgn0015808 FBtr0081109 3 1 1 201 2L 18832286 18832370 GTCAATAATCCCTACTCGCAG 58 18832532 18832551 TCTCCATGCCTACAATTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0080949,FBtr0114502 2 2 2 80 2L 16907368 16907386 GAATGCTCCCTTACTGGTC 57 16907429 16907517 TACTACGGTTTGTTGACTGG 57 NA Drosophila melanogaster 61 CG42266 FBgn0259151 FBtr0299599 2 1 1 80 2L 16339814 16339890 GTAGTCAACAAGAACGATCCA 58 16339754 16339775 TCCAGGAACTGAATATTGTTGG 58 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791,FBtr0080790 3 2 2 86 2L 15895693 15895767 CGAGTCATACTTTGTCGAAGAG 59 15895871 15895889 TCGATCAGATGCACAGTGG 59 NA Drosophila melanogaster 61 TepI FBgn0041183 FBtr0080811 2 1 1 81 2L 15890948 15891018 AAATATTACTGACGTGGGCG 58 15890886 15890904 TGTGATCACCCAAGAGGTC 59 NA Drosophila melanogaster 61 CG33678 FBgn0053678 FBtr0091658 1 1 1 63 2L 15070078 15070096 AACATAGGAGCGATCCAGG 59 15070449 15070467 GGTATGGTCCCATCTTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0300996,FBtr0080535,FBtr0110941 1 3 3 93 2L 13784584 13784793 TATACCAGAGCGACTTCGG 58 13784850 13784868 GAAGTCAATTGCGAAGCAG 57 NA Drosophila melanogaster 61 CG15484 FBgn0032452 FBtr0080406 2 1 1 60 2L 12707425 12707447 CCTATGAACTGAGGAAGAAAGAG 58 12707387 12707407 AGCTCATAGGTATGAATGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34164 FBgn0085193 FBtr0112355 3 1 1 60 2L 12056425 12056509 TCAGACAAATATGCGGTGC 58 12056533 12056551 GATGCTTTAGCACCGACAC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG17134 FBgn0032304 FBtr0080140 1 1 1 60 2L 10821372 10821395 GTTATCTCCTTCTATCTCAAGCGA 60 10821414 10821432 CCAGGATCAGTTCTCCACC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 2 1 1 106 2L 10653276 10653444 AATCCAGATTTGGCGTTGC 59 10653512 10653532 GACCGAATGACCATGTTACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13144 FBgn0032260 FBtr0080037 3 1 1 60 2L 10490921 10490939 GAATCACCATGCCACACTC 58 10490879 10490897 AAAGTACATGAGCTCGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir31a FBgn0051718 FBtr0080015 2 1 1 95 2L 10406429 10406510 GCAAGTGTTATCGACAAGGAG 59 10406567 10406585 TATGAATGCAGCCACTCCA 59 NA Drosophila melanogaster 61 Pen FBgn0011823 FBtr0079937 3 1 1 94 2L 10058684 10058702 TCAAACTGCTGCAAATGGA 58 10058759 10058855 AACGTCAGTCTGTTGATCTG 58 NA Drosophila melanogaster 61 CG33299 FBgn0053299 FBtr0300213 2 1 1 60 2L 9656650 9656668 GAGATTCGTAAGTGCAGCC 58 9656692 9656710 AATCCAGTGTTGAAGTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fy FBgn0001084 FBtr0079712 2 1 1 81 2L 8401885 8401903 ATGCCCATATGGATGAGCT 58 8401763 8401840 GCAAGGAATCTCATTGCGT 58 NA Drosophila melanogaster 61 Acp29AB FBgn0015583 FBtr0079716 3 1 1 60 2L 8393156 8393176 ATGGAACCTTTGGGATCTCAG 59 8393116 8393135 CAATGTAGCCTTTCCGTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8419 FBgn0031999 FBtr0079589 3 1 1 81 2L 8208387 8208459 CTTGATTTGGAGAAACGCAC 58 8208502 8208521 CTACATCAGCACCAATCTCG 59 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079536,FBtr0079539,FBtr0079537,FBtr0079538 3 4 4 60 2L 8036518 8036536 CGACACAGACGTAAAGCTG 59 8036560 8037091 CTCCTCGGTGAGCATATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028,FBtr0079405 2 2 2 87 2L 7183805 7183879 ATGATCCCAAGTCTGTTGG 57 7183930 7183948 GTGATCAGTCCGTAAGAGC 57 NA Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079316,FBtr0079315 2 2 2 60 2L 6685837 6685857 CAGGAAACGATATTCAGCAGG 59 6685797 6685817 CCTGGTATAAGTTCTTCGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DLP FBgn0031820 FBtr0079260 3 1 1 102 2L 6486100 6486178 TGAAGAGAATCGCCTACGA 58 6486244 6486262 CCATTTGCCGTGTAATGTG 57 NA Drosophila melanogaster 61 CG31660 FBgn0051660 FBtr0100301,FBtr0077388 3 2 2 84 2L 4872288 4872306 GAGATGCTCATCCTGTGCT 59 4872354 4872514 CCAGAAATTGTCGTTCCCG 59 NA Drosophila melanogaster 61 Thor FBgn0261560 FBtr0077524 3 1 1 88 2L 3478684 3478702 CATCTCGGATCCGATCCAG 59 3478754 3479196 TAAGTTTGGTGCCTCCAGG 59 NA Drosophila melanogaster 61 gkt FBgn0260817 FBtr0077574 3 1 1 87 2L 3161843 3161921 CAGATTTGTGACTGGCGAG 58 3161972 3161990 CAATGGAACGTCGTATGGT 58 NA Drosophila melanogaster 61 cnir FBgn0243513 FBtr0077666 1 1 1 84 2L 3039578 3039650 TTTACTATGTCCTCACACTGG 57 3039514 3039532 ATTACCCAGAAGTTGAGGC 57 NA Drosophila melanogaster 61 CG4644 FBgn0031300 FBtr0077989 1 1 1 81 2L 1103817 1103896 CTACAGCTTTAAGGACAGTGAC 58 1103757 1103775 CTTCAGAATGCGGTTCAGC 59 NA Drosophila melanogaster 61 CG2807 FBgn0031266 FBtr0078068 2 1 1 121 2L 568424 568609 ACACATGAAGATATCGAGGCA 59 568692 568710 TCGCTGTCGAAGAATCCTC 59 NA Drosophila melanogaster 61 Hop FBgn0024352 FBtr0078131 1 1 1 80 2L 296742 296761 AGATCTTAAAGGATCCGGCT 58 296803 296987 TCTGCAAGTGTTCTTTGACC 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 3 1 1 101 2L 860337 860355 CAAAGGTCCTAACGGAGGT 59 860774 860792 TCACATTGTCCGTGAGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 1 4 4 81 2L 1694370 1694388 ATGTACAAAGGCGAGGTCC 59 1694432 1694556 GACCTTTGACCTGCAAACTC 59 NA Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 2 1 1 109 2L 1705025 1705043 TTTAAGATCGGCCCTGCTC 59 1705401 1705419 CAGTCCATCTGCATTTCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089786 3 1 2 113 2L 1855373 1855391 CAATGCAACGTGAATCCGT 59 1855468 1855626 CACGAACTCATCTTCGCAC 59 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077831 1 1 2 106 2L 2152368 2152386 TTGAAGAGTACGAGACGGC 59 2152454 2152671 AGCAAAGCCCACTTTAAAGAG 59 NA Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 1 3 3 81 2L 2229747 2229769 TCTACTCTTCGATATGACGACAC 59 2229805 2229892 CACAGAATCTTGGATCTTCTTCAC 59 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 1 2 4 85 2L 2793385 2793404 GAACCAAAGATGGAAAGGGT 58 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 CG18557 FBgn0031470 FBtr0077689 2 1 1 68 2L 2845531 2845550 AAGTTGCTGTCACAGTTCTC 58 2845421 2845439 TTGGGATTACTCTTGCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31694 FBgn0051694 FBtr0077685 3 1 1 89 2L 2869344 2869362 CAATGGAAACGCCAAGGTC 59 2869205 2869223 TTTCCACGTGTTATGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 1 4 4 139 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882381 2882399 ATTGAACTTGTAGGCCAGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 2 4 4 223 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882297 2882315 ATTATCCGCGAAGGAGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 1 3 7 116 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 3 2 2 116 2L 2975184 2975204 GTTAATGAAGACACATGCTCC 57 2975017 2975035 CCGTTGTCATGTCATTTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230 3 1 3 92 2L 2994987 2995005 GCCCATGAGATGATCAAGC 58 2995060 2995420 CTTCAGTGTCTGAAGGATCG 58 NA Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 1 1 1 98 2L 3509821 3509843 GTTCTATTATATCCGAGGAGTGG 57 3509678 3509696 CAAATTCGCTGGTTCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 3 5 6 92 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307621 4307640 TGATGTAGCACTGAACAACG 58 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071 1 1 2 80 2L 4401753 4401871 CCCAGCTATAAGAAAGGAATCG 58 4401910 4401930 ATGATTGTGTCCCTTGAACAG 58 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 1 4 4 82 2L 4845307 4845325 AACCGACCAAGATTCCTGG 59 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 3 4 4 103 2L 4845328 4845346 GTAATTCGGGCAAGTTCCC 58 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 1 4 4 82 2L 4845307 4845325 AACCGACCAAGATTCCTGG 59 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089647,FBtr0089648 1 2 3 81 2L 4879192 4880392 CTCGCATACATACAGGAGAG 57 4879130 4879148 TGCTTGGTCAGATAGTCCT 57 NA Nonspecific Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 3 4 11 87 2L 5004201 5004626 ATACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 2 2 2 162 2L 5048849 5048867 GATTTGCCGGGAACATGTG 59 5048634 5048652 CATTTCCCGCTCGAATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 1 4 4 110 2L 5984934 5985037 CATTCATAGAATTGGTCGCGG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 1 3 3 115 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218,FBtr0079217,FBtr0299810,FBtr0112945 1 4 4 60 2L 6047410 6047430 CTGAAGACAAACAACCTCACC 59 6047370 6047389 CATAGTAGAGCACCTCGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 3 2 3 82 2L 6110156 6110174 GATTAGTACGCGACTCGGT 59 6110220 6113043 AGATCTTCTTGACACCGCT 58 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300039,FBtr0300038,FBtr0079249 3 3 3 83 2L 6325528 6325546 GAGGAGATTGACCTCTCCG 59 6325590 6325721 GGTAAGACTATCCATGCTCTCC 59 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 2 5 5 132 2L 6924279 6924299 TGGTTATCATGTACGACCAGG 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 2 3 3 108 2L 7057577 7057595 CATCGAGCTGTCTTTGACG 59 7057667 7057874 GTCATTTCCACCTGTCGTC 58 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 1 3 3 94 2L 7100545 7107149 CACTTCTTCGTGAAGAGCAG 59 7100470 7100488 TAGGTCGATCGTTCGATGC 59 NA Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 2 2 2 145 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312950 7312968 TTGTGGAGATCTCGACTGG 58 NA Drosophila melanogaster 61 CG5149 FBgn0031904 FBtr0079469 1 1 2 80 2L 7385135 7385274 CTACGTGCAGTTGAGTAAACG 59 7385075 7385098 TCTTTAACTGGTAAGTCTCCTACG 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 2 4 4 80 2L 7728554 7728577 GTGCCTTACTCATATTACCATTGG 59 7728433 7728516 CCAACGTGATCCTCAAAGTG 59 NA Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 2 2 2 121 2L 7823093 7823467 GAGGATAGGTTTATTATCGAGGAG 58 7823547 7823565 TTCTTCACCAGCACATCCT 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 3 4 5 61 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896701 7896719 CAATCCAAGAACAGGACCC 58 NA DesignRelaxed Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534 2 1 2 81 2L 8013090 8024521 GGCAGATCTTGAAGATGGC 58 8024566 8024584 CTCCTCATGGTTGTCCTCC 59 NA Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 3 1 1 70 2L 8302781 8302803 GCTCTGTTTCTATCTACTCTCGA 59 8302674 8302692 TCTTGTAGAGCACCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 3 3 3 118 2L 8674261 8674279 CCTCTAGGCTTCCTACCCA 59 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 3 3 3 83 2L 8944164 8944247 TACAAGACGGATGAGGGAC 58 8944099 8944119 CAGCACATACATTTGATTGGG 58 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771 3 1 4 117 2L 9162696 9163300 CTTAAGTTTCGAGAGCGGG 58 9163381 9163399 CGAGTCCACCATTATTCCG 58 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 3 3 3 80 2L 9338453 9338473 TTTGGTCTCATCAATCACCAG 58 9338513 9338599 TAAGTAATGGCTCTGGTAGCA 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 2 4 5 81 2L 9535892 9535998 CACCACTATATCGATCACTCC 57 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 3 1 1 292 2L 10201418 10201436 GTACATCAAGGCGGAACAG 58 10201762 10201780 CACGCTTGTAGATCAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 2 3 4 91 2L 10248581 10248601 ACGACAGAATGTCCTATTTGC 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300982,FBtr0302378,FBtr0080087 2 3 4 91 2L 10248581 10248601 ACGACAGAATGTCCTATTTGC 58 10248447 10248530 GGATGGCTTTAAGTCTCTGTG 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 3 4 4 81 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415401 10415481 TGCTGAAGGTACTTTAAGGC 57 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0301005 3 1 3 101 2L 10581347 10581433 CTTTCGCAAGGCCATTGAG 59 10581264 10581283 TCAGTCATTTGGTCCAAGGA 59 NA Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 2 1 1 60 2L 10737746 10737765 TTCGCATCTAATCTCACCCA 58 10737896 10737914 GTAGCTCTGTTTCAGCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899 3 1 2 99 2L 12433698 12433842 CGCTTAAGGTCGACAATCTC 58 12433618 12433637 TCCCTGGGTATGTAGATGTC 58 NA Drosophila melanogaster 61 Vha68-2 FBgn0020367 FBtr0080419,FBtr0080420,FBtr0080418 1 3 3 246 2L 12976593 12976611 TACAAGGTCGACGATGTCG 59 12976821 12976947 AGTACTTGGACAGAGCCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9395 FBgn0032506 FBtr0302043,FBtr0302042 1 2 2 84 2L 13354151 13354169 GATCAGGCATGAGCTTCCT 59 13353818 13354104 TCGTCGATCATGAAGACCTC 59 NA Drosophila melanogaster 61 CG9293 FBgn0032516 FBtr0080526,FBtr0080525 3 2 2 89 2L 13387100 13387184 TTTAGACGGATTGGAAAGTCTG 58 13387032 13387050 TTCATCGCTGTTTGTGCTC 59 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 2 5 5 80 2L 14195780 14195800 AATGTCATACACATGCTCGAC 58 14189221 14195741 GTACAGGTTCAAGCTCATTAGC 59 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 3 3 3 105 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357596 14357614 TGTGTCCCAGATCTGTAGC 58 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 3 4 5 83 2L 15760332 15760410 GGATTACAGAACCTACACGT 57 15760268 15760286 TTTCTGCCTGGATAGTTGG 57 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823 1 1 2 83 2L 16239552 16239574 CCCTGCTATAAGCTCAATATGAG 58 16239615 16239824 GTACAGTTCCTCATCTTCGTG 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080846,FBtr0080847 1 4 4 199 2L 16314849 16322968 ACTACGATGGAGAACGCTG 59 16314607 16314625 TTCCAGGTTCAGCTTCTCG 59 NA Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 1 1 1 60 2L 16336295 16336318 ACATGAATAGGAGATCCCATAGAC 59 16336198 16336219 TCTTCATTACCATCAGATCGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080977 1 1 10 133 2L 17394482 17398610 GGCTTATACAGATCTCTATCAAGAG 58 17398701 17398856 CATAAGATGCGCGACTTCC 59 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080996 2 1 2 80 2L 17489893 17496743 ATCAAGCAGGAGATCCGTC 59 17489831 17489849 AATCGCATGTTTAGCCACC 58 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 3 5 5 149 2L 18320723 18383414 CTTAACAGATGCACTCACCTG 59 18383525 18383543 TTGAGTACCTTCTGCTCGC 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 1 4 4 103 2L 18827251 18827520 AGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 2 2 2 91 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542982 19543632 TCTTTATCAGCGTCGATCCA 59 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0081318 2 1 3 82 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779320 19779404 CGTTGTTGGTACTGTGCAC 59 NA Drosophila melanogaster 61 pr FBgn0003141 FBtr0089396,FBtr0089395 2 2 2 80 2L 20074239 20074260 AGAAACTGTGATTATGAAGCGC 59 20074118 20074198 GTGGTGCTTGGTGTATTGG 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 3 5 7 80 2L 21128054 21128754 CATTCCTAGGTGGTATAAACAAGC 59 21128793 21128811 CCTTCGAGCTGGAACTCTC 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 3 3 4 84 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257178 GTGTAAGCTTGCAAGCTCTG 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081483 3 1 3 97 2L 21280361 21280379 CTCGGCAACTACTATGTCC 57 21280439 21281142 AGCTGGGATTCATCATTGTG 58 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0100139,FBtr0081512 1 2 3 60 2L 21312018 21312039 GCTGTATGACGATAACTTTGCA 59 21312114 21312132 GGTCAAGGCTTCATCATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 3 2 2 81 2L 9789414 9789432 GCCTCTACTGACAGATGAC 57 9789291 9789371 AACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0091528 3 1 2 81 2R 1131096 1133466 TAATTCTGAAGGCATGGTGG 58 1131034 1131054 ACATAAGTCGGTGACAATGAC 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 3 3 4 97 2R 1414858 1414876 GGACATCCTAATGGCTACG 57 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 1 2 2 135 2R 1846598 1846616 AATTTGTTCGCCTCCATGC 59 1846712 1846791 TGTAGCTCTCGATGAAGAAGAG 59 NA Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 1 1 1 142 2R 2495735 2495753 CATTGGACGTCCTTAGTGC 58 2495552 2495571 CTTCAAGTTTCTGCAACGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 1 4 4 69 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515399 2515417 TTAGCAGTGCCATAAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 2 2 2 80 2R 2558898 2559027 GGACAAGTTCTACTGGTACGA 59 2558838 2558859 CCCAGCAGTGAATAGATAAAGC 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 2 3 5 123 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642302 2642320 TGTTGACCGAATTGCTCAC 58 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 3 3 3 87 2R 2752069 2752151 GGTATTTCGAGGTAACGCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 3 11 11 89 2R 2764982 2765001 AAAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 1 11 11 88 2R 2764982 2765000 AAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 3 2 3 80 2R 2880546 2880631 ATAACGCTCCAAGTGTTATCC 58 2880670 2880691 TCCAGGAAGTTACATAAGTCCT 58 NA InUTR Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111097 3 1 59 81 2R 3233828 3233846 GCTGGGAACTACTCCTGTG 59 3219877 3233783 TGGGAGGTACATTGACAGC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 3 2 59 103 2R 3238797 3249235 TTGGTCATCACAGAGCCTG 59 3238712 3238730 CAAGTTAGGGCCAATTCGC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111072,FBtr0111058 3 2 59 80 2R 3236477 3246744 TCCACAGCCAATATCTAGATGG 59 3236418 3236437 TTCACACGGTCATTTAGCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111103 1 1 59 92 2R 3236477 3242206 CGGTACCATTCTTCAGATGG 58 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 3 2 2 81 2R 3278703 3278723 CAGTTACTCGTCGTAGATGCT 59 3278580 3278660 CGGATGCAAACGATGTCAG 59 NA Drosophila melanogaster 61 CG2070 FBgn0033203 FBtr0088921 2 1 1 79 2R 3549901 3549921 GCTCCATGAAGTCCATTAGGA 59 3550029 3550049 GGCGTTGTTGATAAGAATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 sax FBgn0003317 FBtr0088832 2 1 2 191 2R 3694088 3694580 TACAATAATGCCAGAGCCGA 59 3695101 3695119 CTCATAGGGATCCCGACAG 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 2 2 2 60 2R 4048557 4048576 CGAGTGCAAGTCTATTGTCG 59 4048413 4048431 GAGCGATTCTTAGAACGCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 2 9 9 80 2R 4568218 4568302 TCATGGACTACCGTGATATGAC 59 4568342 4568361 CTTCCCAGTTGACTAGACGG 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 2 4 4 119 2R 4642430 4644855 GAACCAAAGACTATCGATATCTCG 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 1 2 4 144 2R 4757940 4758093 CGATGGACACAATGTGACC 58 4759738 4759756 GTCCATCAGGAGTTCTCCG 59 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 2 2 4 145 2R 4757940 4758093 CGATGGACACAATGTGACC 58 4759739 4759757 CGTCCATCAGGAGTTCTCC 59 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 3 1 1 149 2R 4788481 4788500 GATTACGGAACGCTACAGAC 58 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 3 4 5 95 2R 4788973 4788991 TTTAGCCCGTAGAGTTCGA 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 3 3 3 92 2R 4799447 4799530 GAGAAGAATGCTCCTGTTATCC 58 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 3 2 3 148 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967851 4967872 AGCAGTACATAAATCGAGATCC 57 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598,FBtr0088622 1 2 2 81 2R 5046965 5047045 TGTATTCGATGGAGTGATGAC 57 5046904 5046922 AAAGAATGTGTAGTCCCGC 57 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 2 3 10 82 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 2 3 3 116 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150001 5150019 TGTTAAGAGCCCTCGAAGC 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0088391 3 1 4 92 2R 5876800 5877986 TTCCAAGGGTGAAGATCTGG 59 5878041 5878059 GAGTTGTCGTCATTCTGCG 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 1 3 3 80 2R 5919619 5919726 CAGATCAATGGAGGATACCG 57 5919558 5919576 TAAGAATGCGTTTCTGGGT 57 NA Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0112799 1 1 4 80 2R 6097602 6124513 CACCATCAGAGCTCAAATTGAG 59 6097543 6097562 GTGATCACTCCGTAATGCAC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301131 1 1 17 88 2R 6183480 6183498 TACAAGAGTCTCCAGGCAG 58 6183550 6192144 AAGTGGATGTTCACGTCAC 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089353 1 1 26 118 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6405692 6419549 CAGGTTAGTACGAAATCTTGGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 1 5 12 88 2R 6449616 6449635 ACATTATCTTCACCGACCTG 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 1 3 3 91 2R 6527407 6527426 CAATCATACAAGTTGTGCGT 57 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 2 5 5 106 2R 6624407 6624428 AAACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 2 4 4 80 2R 7097351 7097430 AGTTCAGAGTTGCCGAGTC 59 7097474 7097492 AGACAGTGTGGAAGGTGAG 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089381,FBtr0089379 1 2 5 169 2R 7198801 7198820 ATAAATCCGATGCGTAGCAC 58 7198160 7198669 ACTTCGCAGCGATAATTGC 59 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088043 3 1 2 101 2R 7876823 7876898 CCGCTTTCTGATATACTCAACG 59 7876960 7876978 GGATCGTACTCCATCCAGC 59 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 1 4 4 80 2R 8191681 8191699 CAATAAAGCAGCATGCCGA 59 8191549 8191640 TCTCCCTTAGATCGCTTATCTG 59 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087942 2 1 2 60 2R 8400761 8400880 ACAGTGTCATCTACAGCTGG 59 8400720 8400738 AGACTTTGAAAGCCCATCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 2 8 8 91 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560466 8560484 CGAAACTCGTAAAGTCGGG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089877,FBtr0089873,FBtr0089875 2 3 6 80 2R 8766205 8766566 CAATACCAAGATCCCAACCAG 58 8766145 8766163 CTGAGGTGGATATCCACCA 58 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801 2 1 2 80 2R 8832629 8832651 CTTTCAGCTTAAGGAAGGATCAG 59 8832506 8832593 CATCTGGTTGAGTATCTGAACAG 59 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 3 2 2 83 2R 9022188 9022271 CACCTATATGGATAAATTCTGCCAG 59 9022312 9022330 GAGAGGAGCATGTTCTGGA 58 NA Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 2 2 2 95 2R 9241392 9241560 GCAGTTCCACGATAACTGG 58 9241315 9241333 CACCAGTAAAGCAACAGCA 58 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0301395 2 2 6 112 2R 9332017 9332036 AATCCCTAACAGCCTGTGAG 59 9331839 9331942 TATGGCCTCGTTGGATGAC 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 mars FBgn0033845 FBtr0087668,FBtr0301387 2 2 2 80 2R 9391985 9392004 GTTACTCAGTGGCGAATTCG 59 9392045 9392122 CTCCAGTGTCTTCTTTAACCG 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 3 5 5 150 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426351 9426485 GCGGCCATCTTTAAAGGTC 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 3 5 5 82 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436390 9436472 ATACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 2 3 8 80 2R 10064183 10065370 CCTCGACAAGAACTGTGAC 58 10065414 10065432 TCCTCGTTATCCTCCAGTC 57 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 1 3 8 81 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065421 10065439 TTGCGAGTCCTCGTTATCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 2 4 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 3 2 2 80 2R 10558087 10558168 GATAAGAACACCCAGCAAGTG 59 10558205 10558228 ATGAACTCTAGAAATCCTATCGGG 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 3 3 4 181 2R 10641644 10641662 CTGCTGTGGGTAAATCGAC 58 10641385 10641501 GATTCTCATTGCTTTCTCGTG 57 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 3 3 5 162 2R 10797861 10797879 CGCAAGTCTCCCTATGGAG 59 10793447 10797735 CAATGCAGGAATCTGCCAC 59 NA Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 3 2 3 80 2R 11269849 11269867 GACCAGGAGCTTATGGAGG 59 11269909 11270918 ATGGTAGCGATCATGAAACAG 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 3 5 7 95 2R 11551928 11552826 TGGAATTTGCTCCATAGACGA 59 11551853 11551871 AACTTGGCAATGTCCTGGT 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112831,FBtr0087302 2 3 5 136 2R 11773780 11773799 GACCGTGATATACGAGACGG 59 11772980 11773608 TGTTGGAGATGTCCAGTCG 59 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087292,FBtr0302149,FBtr0087295,FBtr0087293 1 4 5 84 2R 11826749 11827422 CTTATGAACAACCACATGAACC 58 11826686 11826705 GCATAAAGCTGTTCATCAGG 57 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 3 2 13 125 2R 11850639 11850658 AATACACTCTACGGGTCAGG 58 11848685 11850554 AATATGTGTCTTTGATGCCCAC 59 NA Drosophila melanogaster 61 CG10731 FBgn0034081 FBtr0100497 3 1 1 162 2R 12036519 12036537 ATGGGCCTAACTCTGAAGC 59 12036250 12036268 AGTGTTGGCTATAGACCGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100440,FBtr0100436 3 4 4 92 2R 12746186 12746205 GATTTCTCCAGCTCTGACGA 59 12746259 12746340 AGGATTGTAATCTGAGCCCG 59 NA Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 2 2 2 60 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885855 12885873 GATTCCTCTCAGCTCCTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628 3 5 6 94 2R 12901357 12901375 TCACACCATATCCGTCACC 59 12901220 12901300 CCATTGGAGTGACATCTTCG 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273341,FBtr0087009 3 2 9 164 2R 12959348 12959484 AATCTGAAGACCAAGAGATCC 57 12957235 12957254 GAAGGGATCGTATTTGTCCC 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 2 2 2 102 2R 14273055 14273074 GAAGAGCCTGACGTTATTGG 58 14272917 14272935 ATCATGGGAGCAGTTTACG 57 NA DesignNoJunction Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 1 2 2 155 2R 14329811 14331170 TGTTGATTTCTCATGGCGG 58 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 CG15096 FBgn0034394 FBtr0086633,FBtr0086632 3 2 2 113 2R 14697625 14697644 TATTCTTTGCCCTTACGGTG 58 14697465 14697549 CCGACCAATTATACTCGGG 57 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 1 5 5 80 2R 14844932 14844950 GACGCCCAACAATCATCTG 59 14844990 14845239 CTAAGACTCTTGTACCTGATGTG 58 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 3 4 5 95 2R 15024321 15024464 ATCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 3 5 12 170 2R 15062802 15063699 GCAATTCACTTGGACCACG 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 2 3 12 81 2R 15064177 15064196 GATTAGTCACAAGCAGTGCC 59 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 3 3 19 90 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365203 GAAAGGTTGAACGTGATGGA 58 NA Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 1 2 2 80 2R 16764062 16764082 TTAATTTATGGCGATCACGCG 59 16764123 16764775 AAGCACCATAATTTCACCGG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302703,FBtr0302707 2 2 8 135 2R 17185985 17191401 CCAGCCAGAACATAAATCGC 59 17191496 17191517 CGATCATCGATGGTAAGATGTC 58 NA Drosophila melanogaster 61 CG30394 FBgn0050394 FBtr0071614,FBtr0071613 2 2 2 106 2R 17209251 17209326 ATACAGAAAGGGTCATACGGA 58 17209165 17209183 GAATAACCAAAGCCACGCA 59 NA Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 2 2 2 88 2R 17585954 17585972 AGAAGGATAATCCCGGCAG 59 17585801 17585902 CTCCCACTCGGTCTTATCC 59 NA Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 2 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556 3 1 5 81 2R 17954775 17955938 CGGATATCGACAAGCAACTG 59 17955981 17956000 TCCTCGGGATCGTTATTTGG 59 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071802 1 1 2 136 2R 17960562 17960726 TCTATAAGCAGAGCTTTGCCT 59 17960379 17960397 TTCAATATCGGCTTCCGCT 59 NA Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 3 1 1 68 2R 18010944 18010963 ACCACTAGGATACCAGAGGA 58 18011055 18011073 TAATTCCGCTGGTCTTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 2 3 3 80 2R 18025743 18039164 ATCAACCACTCACGATTCTG 58 18050415 18050434 AGAGACGCATACTATGTTGG 57 NA InUTR Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 1 4 4 172 2R 18294823 18294971 TTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 2 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 3 2 3 133 2R 19656590 19666547 CTGATAATGGAGGGCAGCA 59 19656475 19656493 TCACTCAGTTGGCCTTCTG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136 1 2 4 80 2R 19797345 19799206 GGTCGTACGATGACTCAGG 59 19799246 19799268 CGTACAGATATAGATTTGGGTCG 58 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 1 6 6 80 2R 20287859 20287947 AGAAGTCCTTAGTCAAAGATCC 57 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 2 6 6 81 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287801 20287822 CAGATTTCTGTTGATGAAAGCG 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 3 3 5 112 3L 234494 234575 GCCAATGGATCTCAAACGG 59 234400 234421 GGTTATAGTAACGGCAGTTGTC 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 3 2 10 105 3L 298043 298062 TGACTGTGAAATCGTCACAG 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 2 2 2 86 3L 325966 326044 GCCAAGAACAAGAATATACGC 57 325900 325918 TTTCTGAAGGGACTTTGCC 58 NA Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604 3 1 2 94 3L 710234 710317 AGCATATTTCCCGGTTATTTGC 59 710161 710179 ACGAAGATTTGACTCCGCT 59 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 1 6 6 80 3L 998875 998894 CCGAATACATAGTCAGTGCC 58 998722 998833 AGTTACTCAGATCCAGACGA 57 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 3 2 2 141 3L 1312656 1312733 AGTTTGGGTGATAGGGCAC 59 1312533 1312553 CACGTATTTCTCGATGAAGGC 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 1 4 4 80 3L 2498021 2498106 CTGGAAGATGTGAAGATAAACACC 59 2498143 2498163 TGAGATCCAGCGATTTACTCC 59 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 3 2 5 148 3L 2558031 2560129 CATCCAGTGAGGAGAAGCA 59 2557901 2557919 ATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0273190 1 1 2 123 3L 2660121 2660201 GTTGGAACTTTCCTCTCGG 58 2660288 2660306 AGATGAGAGCTAGACCCTG 57 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 3 5 5 67 3L 3300763 3300781 GTAGTACCACCGATCTGGA 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 1 2 2 72 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466961 TATAGTAGACGGCCAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186 2 1 5 80 3L 3799928 3799948 GATGTCGAAGTCCCATAATGC 59 3769389 3799889 CTCCATTCTGTTTCTTAGCTCG 59 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 1 2 4 154 3L 4290905 4290923 CTTTGGTCAAATCCTGCCG 59 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 2 2 5 80 3L 4503453 4503539 AAATGCAGTAATCCCGTCGA 59 4503392 4503412 ATGATAGTTGTACACCTGCGA 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 2 4 10 83 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534358 5534445 TCGTTAATACCGTTATAGCGTC 58 NA Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 1 2 2 118 3L 5755805 5756155 GAAGCCATCCGAGATTGTG 58 5755705 5755723 CAACACTGTACTCGCTCAC 58 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 5 6 104 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583713 TAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 3 2 2 83 3L 6711101 6712112 GTATTGAGAATGGCTATCCATCC 58 6711040 6711058 GTTTGGTCTGCTTGACCAC 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 1 6 11 80 3L 7005318 7005337 CATTGGCAATGATTTGCACG 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 1 3 4 91 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089849,FBtr0089850 2 2 3 86 3L 7610694 7612897 ACAGTCTAGAGACCTGCGA 59 7612947 7612965 AATAGACGCCACTGGTCAG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076780 2 1 7 161 3L 7823616 7823636 GCAACAATAGTGGCAATAGCA 59 7813118 7823493 GAGATTTCCTGCCTGAGCT 59 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767 3 1 2 93 3L 7967217 7967742 AGTTCATGTCGTGTGGAGG 59 7967142 7967160 TGGAGGTTGATACAGCAGC 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 3 4 5 86 3L 8092628 8096003 GTCATTAAGGAAGCCCTCTC 57 8096052 8096070 TTGCACCGTAATACTGGAG 57 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 2 3 3 80 3L 8262216 8262820 GATTTCCGATACCAGACAGC 58 8262863 8262881 TATTCACGTGGCTGATGAC 57 NA Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 3 1 1 105 3L 8319394 8319412 GTACTCCTTCAACTACGGC 57 8319938 8319956 CTCAACCAGGGAGTACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 3 2 2 81 3L 8372406 8372961 CTGTTTGTCATCCCAGCTC 58 8373006 8373024 CAGACAACTGCTATTGGCC 58 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 1 4 4 115 3L 8463417 8463435 CTTATACCTAGGGAGCCGC 59 8463573 8463863 GGCCGTTGTCTAAAGTACTG 58 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076629 1 1 5 96 3L 8576859 8579083 CAATTATGTGTCGCTACCTGG 59 8579141 8579159 ATCCTCTAGCTGGGAATCG 58 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 1 4 4 120 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727222 8727351 GGACAAGTTCTTGACTTCGAC 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 2 5 7 92 3L 8902028 8902101 CATCTGGAGTGGTTAGTTTGC 59 8901956 8901974 TGGACTCGCTGCTAAATCC 59 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 3 5 5 126 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100465 9100727 GTGGGTACATTCATTGGCAC 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076536 3 1 3 94 3L 9156067 9161913 CGGAAGTTCTAATGGACTTCAC 59 9155994 9156012 TGTTTCTACACCAGGTCGT 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0301773 3 1 6 176 3L 9338001 9338019 CTCCAAACACGAAGATCCG 58 9338156 9339668 GTTAGAAACCTTTGGTTCAACG 58 NA Drosophila melanogaster 61 CG3689 FBgn0035987 FBtr0110863,FBtr0076456 3 2 2 60 3L 9404829 9404920 AGATTGCTATCCGAGACGC 59 9404944 9404962 CCTCAACAATCCACTCCTG 57 NA DesignRelaxed Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 3 1 1 112 3L 9420388 9420406 AATCCCTGGACTTCGAGAC 58 9420539 9420562 CGATATGAAGTTGGTTAATCTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 3 3 3 98 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503664 9503682 TCAATCTTCAGACCCAGCA 58 NA Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 1 3 3 101 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143510 10143528 TCCGCATCGTAAATGAGCA 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 3 4 4 81 3L 11030771 11030790 CTTTGGCTTCCTGAAGTACG 59 11030643 11030728 GGATTGGGCCAACTTATCCT 59 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 1 3 3 80 3L 11064017 11064035 ACCGGTTACCTCAATCTGG 59 11064077 11064162 GAGTGGCGAATTCTTTCTCAG 59 NA InUTR Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347 2 1 3 164 3L 11167855 11167989 AAAGTTCGAACGGATCTGGA 59 11168116 11168196 AGGAACCGCATAGCTACTC 59 NA Drosophila melanogaster 61 CG14128 FBgn0036218 FBtr0300723,FBtr0300724,FBtr0300722,FBtr0300721 1 4 4 80 3L 11873192 11873213 AAGCTTCTAAAGCACTAAAGGC 59 11873251 11873329 TGGAATTATCACACTGTGATGC 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 1 4 6 118 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 CG32102 FBgn0052102 FBtr0075978 3 1 1 211 3L 12462861 12462880 AGACATCTCATTATCGCCAG 57 12462500 12462521 CGAAACTGCAACTAAACTACAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0300686,FBtr0089322 2 2 3 81 3L 12493241 12493324 CCTAAGATACTTGATCGATATTGGC 59 12493184 12493208 TATATCCAGATTCTCTACGAGATGG 59 NA Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089322 1 1 3 181 3L 12494122 12494265 TTTAAAGAAGTCTCGCTGTGAG 58 12493888 12493981 ATATGTCCCACAGCTTTGTG 58 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300887 3 1 4 88 3L 12531666 12532103 ACGTGGAGAAATCAAGGCT 59 12531535 12531555 TCTTTACCCGGACATTCAGAG 59 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948 1 1 2 136 3L 12765676 12766385 TCTACCACCTGAACGTCAG 58 12765558 12765576 CCGGGAGATGATCATCCAG 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 3 3 4 175 3L 13462162 13462887 GCATGAACAAGGTCTTGCC 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 2 2 2 86 3L 13975944 13976213 AGCGATACAGGAATACCGC 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 3 2 2 248 3L 14744378 14744396 GGCCATCAGATCATAGGCA 59 14742619 14742637 GCTCAATTGAGTTGCTGCT 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 3 2 2 84 3L 15921442 15921460 TCTTCGACTATGTCTGCGG 59 15921311 15921397 GCATAGAAGTTGGAGGTTTGAC 59 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 2 3 3 137 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748786 17748807 TCCTAGAAGGAGCATAGATCAG 58 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 3 2 2 86 3L 18747722 18748241 AAATTGTGCTTCGATTCTGG 57 18747591 18747609 TTCACGAATCATCGGTGAG 57 NA Drosophila melanogaster 61 Rad9 FBgn0025807 FBtr0075080,FBtr0112917 2 2 2 80 3L 18865208 18865281 GCAACATGAATGAGGTGGAG 59 18865147 18865165 GCTTACAGCGGAGATTCAC 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 3 2 3 84 3L 18880214 18880233 ATACTACTTTGCAACGAGGC 58 18874340 18880167 TTGTTCTGGACCCTCTAGC 58 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089594 3 1 3 80 3L 19810792 19810866 ACTCTAGCAATATAATGGCCG 57 19810732 19810753 TCCATAGCTGGTAAATTTCTGG 58 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 1 4 4 80 3L 20254920 20254939 GTTTCCCAACAAGTTACGGT 58 20254982 20255057 AAGACCGTTCTTATGCAGC 58 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0301602 2 1 4 145 3L 21041881 21061820 ACGAGATTTACTGCTTTCCC 58 21061926 21061946 ATTCTGCAGGTAAACATAGCC 58 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 2 4 4 80 3L 21488748 21488768 ACGGCCTTCAATTTGAATGAG 59 21488570 21488708 GGTAGCGAACATCAATGTCTG 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 1 3 4 116 3L 21488958 21489528 AAGTGATTCTGTGCAGCAC 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 2 2 3 171 3L 22262797 22262816 TACTTCGTGGTCACTTCACC 59 22263010 22264667 CAACGTCCTCATTCAGATGTG 59 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0113188 2 1 2 84 3L 22726681 22728020 CTTCATGGAAACGTGCTGAG 59 22726616 22726634 CTTCCTCCAGTGTCTCCAG 59 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0113191 3 1 3 85 3R 96066 103175 AAATAGTTGCTTGCACGGC 59 95999 96019 TTTAACAAGGAATTGCTGCCC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0301772,FBtr0300789,FBtr0301768 2 3 21 165 3R 110120 113803 CCGTTAAAGATGCTGCAGG 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 3 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 1 3 4 80 3R 162125 162203 GGCCCAGACTAGTATCCAG 58 162063 162086 CTCAGGTCAAGATATTGTAATCGG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078942 1 1 4 80 3R 271957 272154 TTTATGAGTGCTTGATGGGC 58 271896 271917 ATGTGGGACTATCTGTGTAGTC 59 NA Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 2 2 3 80 3R 464125 464277 GTAAGCCTACAGGCAAACC 58 464063 464083 TGGTGGACATATACTGATCCA 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 10 10 91 3R 561270 561374 GATCTGCATGTGAAATACGAG 57 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 CG1115 FBgn0037299 FBtr0078777 3 1 1 152 3R 1052619 1052637 CCATCCAGACCGTACTGAG 59 1053096 1053116 CCTCTGATTTGCAATTAACCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0089685,FBtr0089686 3 2 4 95 3R 1402974 1403326 CTGGCTTATGACGATTTGCA 59 1403382 1403402 GGGAATCTTGGTAAAGTCACC 58 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 3 2 2 83 3R 1494403 1494423 AAATCCGTATCTAACCTGGAG 57 1494184 1494358 TTTCGAGACTTTGAGCAGG 57 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 3 2 2 119 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161730 2161750 CGGATATAGTTCTCAATGGCG 58 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089276,FBtr0089277 1 2 4 135 3R 2552943 2565279 CAATCAGGGTGATAACTCCA 57 2537545 2537563 TATCTCGATCCTCCTTGGG 57 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 3 2 2 81 3R 2579788 2579809 ATCCTTCCGAGGTTAAATACAG 57 2579664 2579682 TTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Aly FBgn0010774 FBtr0081642 3 1 1 110 3R 2905012 2905032 ACTTTGGTCCGATAAAGAAGG 58 2904688 2904706 GTTTAATGGCCTTCAAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0113200,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 2 9 9 153 3R 2924195 2924284 CTTTGACATTGCCTCGCTG 59 2924060 2924078 GTTGCTTGCGATGGTACTC 59 NA Drosophila melanogaster 61 gfzf FBgn0250732 FBtr0091512 1 1 2 80 3R 2973445 2973464 ACAGATGGGATCATTGAGGT 58 2972799 2973408 CATTGTGTAGATGGGTACAATAGAG 59 NA Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909,FBtr0300545,FBtr0081910,FBtr0081908 1 4 4 112 3R 4547248 4547266 CTCAAGCCATCTCCATGGA 59 4547408 4547426 GAGTCGAATGTCTCCTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir85a FBgn0037630 FBtr0081917 2 1 1 60 3R 4621856 4621877 CAGATGTACGAAATGATGAGGA 58 4621948 4621969 TGTGATACTTCTCCAAATAGGC 58 NA DesignNoJunction Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 1 3 3 95 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064806 5064824 TTCAGGTTGACGGATCCAG 59 NA Drosophila melanogaster 61 sage FBgn0037672 FBtr0081983,FBtr0081982 3 2 2 98 3R 5088865 5088883 CATGAACCGAGCCTTTGAC 59 5088724 5088805 TTGATGGCAATCCTCAAACTC 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 2 2 2 60 3R 5091840 5091860 TAATAACCTGGAATTCGTGGG 57 5091742 5091762 CTGGATGCGAATGATGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052,FBtr0082054 3 2 4 89 3R 5195422 5196744 CGGCCAGTATATCGCTCTC 59 5195351 5195369 GCAATCGAACCACTTCCTC 58 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 1 3 3 95 3R 5284385 5284403 TCAGCCTGATCAAATCCGG 59 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 1 4 4 93 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 2 4 4 94 3R 5401288 5401373 ATACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 1 3 4 70 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520885 5520903 GATAGAACTCCGACCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183 3 1 2 131 3R 5990544 5990562 CCTACACAATAGCTGCCGA 59 5989569 5990450 CATCATCGGCCATTTCATCG 59 NA Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 1 2 2 126 3R 6162872 6162954 AAAGAAAGAGCATCTTGCCAG 59 6163042 6163060 CTTGGACGATTTCGCTGTG 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 3 7 8 89 3R 6428521 6428542 ACGAGGATATTGCAATGTTCAG 59 6417172 6419281 CTTGCACCATCAGTGAGTC 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 2 7 7 98 3R 6692601 6692620 TTACGGTGAACAAGGAGGAG 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100320 2 1 3 99 3R 7390429 7390520 ATCATTCATCTTTCGGCGTC 58 7390349 7390367 GTCAGGGTGTAGGTATCGC 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082470 3 1 4 91 3R 7614735 7614807 GACCTAAAGTCTGCACTACAG 58 7614858 7614878 ATATAAATGGCTGTGGCATGG 58 NA Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 2 1 1 60 3R 7707759 7707777 TAGACATCAATCTGCTGCC 57 7707663 7707683 CTAGGATTCTGACCATTCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 1 3 15 193 3R 7815047 7817808 CTCAGATAACTCCAGCAGC 57 7814462 7814480 ATTGCTGGAAGAAGATGGC 58 NA Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579 1 2 3 154 3R 8213503 8213522 CCATGGCCGTAATCAATGAG 59 8213638 8213709 CGAGAAGACTTCCTTCAGCT 59 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0082730 2 1 3 71 3R 8787195 8787213 AATACGCAACCATCTCGCT 59 8786017 8786036 TTAAACTTTACGTCCGTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 3 3 3 92 3R 8825163 8825181 ATGGCCATTGAGAACATGC 58 8825234 8825313 GAAATATAGCGTAATTGCACGC 59 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743 2 1 3 120 3R 9134615 9135199 GCGTACTTTCAGATAATCGCT 58 9135281 9135299 AATCCCAGATTCTGGAGCA 58 NA Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 3 2 2 160 3R 9193735 9193755 AAGAAGTACGTCAATACGGAC 57 9193876 9193985 GCATTATTGTAGTTGCGTCG 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 2 5 5 80 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796281 9796299 TCACCCATTTCTTCCCGAC 59 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 3 2 3 81 3R 10225507 10233891 GATCGCTATTTAGCAGAAATCG 57 10225447 10225465 ACATCTGTGCATATTGCGG 58 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082988 1 1 3 119 3R 10568205 10568223 GAACTTTAGCTCGCTACCG 58 10568306 10613789 AAGCCTTCATTCTTGTGGC 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 2 7 7 88 3R 10634008 10634095 CCTACGTTAAGGTGTATCTACTG 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 1 3 7 80 3R 10653002 10653265 CTTGGACCATATCGAATCCC 57 10652941 10652959 GCTGCGGATATAGGTTGTC 58 NA Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 1 2 2 80 3R 11029203 11029284 GGAACTTAATCCTATCCTTGCC 58 11029144 11029163 GAGGTCAGATCATCGAAGGT 59 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 3 2 2 80 3R 11040076 11040154 CAACGATACTGATCAGGCG 58 11040198 11040216 TCGACGAAGAAGTACCGTC 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083080 1 1 3 96 3R 11138923 11138941 CATCAAGTTGAAGGAGGCC 58 11139001 11139323 GAAGAGACGGTCCTCTAGC 59 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405 1 1 2 93 3R 11142530 11142621 GATTACGTCTTGAGCCAAGG 58 11142677 11142695 GTCCATTGATGCCCATGTC 59 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 3 2 2 149 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188898 11188916 GGAAGTGAACTGGGTTACG 58 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083101,FBtr0083099,FBtr0083100 3 3 3 144 3R 11239223 11239300 AATTATGCATGGGTCTTCTCAG 58 11239405 11239423 TGACGAGTTGCTCTGAGAG 59 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 2 4 5 195 3R 11723421 11723505 GAGCTAAGTGGAAATGCTCG 59 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 3 5 8 105 3R 11780833 11780853 GAATTACTTCTACCGCGTCTC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 2 7 9 80 3R 12119859 12122387 TGATAGCGAAACAACTTCTCC 58 12122428 12122447 AGTTCTCTGGTTTCACATCC 57 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083384 3 1 5 139 3R 12757322 12758102 CAGAAGGAAGACATCAATATGTCC 59 12757206 12757224 AATCCCTCGTCGTTGTAGG 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 1 5 5 85 3R 12920386 12920404 CTCGGTGAAGTACGATCCC 59 12920256 12920337 TGAAGGGAGATCCTTGCAC 59 NA Drosophila melanogaster 61 CG7215 FBgn0038571 FBtr0300247,FBtr0100283 1 2 2 63 3R 13992872 13992890 CAATCAAGGTGCTGAAGGG 58 13992768 13992786 TCCAGAATCGTCGATGTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 1 1 1 60 3R 14210036 14210055 TGAATACGGCATTTGGATGG 58 14209907 14209925 CTTCCCAGGCTTGATTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14309 FBgn0038611 FBtr0083580 3 1 1 63 3R 14210039 14210058 ATCTGAATACGGCATTTGGA 57 14209907 14209925 CTTCCCAGGCTTGATTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 1 2 5 94 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750866 14750886 AGTCAAGAATATCCGTCTCAG 57 NA Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 3 2 2 87 3R 14967735 14967822 ATACAAGCACAAGCTGGTC 58 14967666 14967684 CAGCTCGTAGGAATCTGTG 57 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 3 4 4 98 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981432 14981451 CAGTCAAGCACCTTGTTCAC 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110915 3 1 8 104 3R 15352948 15380551 TTGAGTCAGGACCTACAATCG 59 15380617 15380635 ATCCTCTTGTGAGGTGAGC 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0301116,FBtr0083814 3 3 3 82 3R 15676017 15676035 CTGTTTCGCAACCTAAGGG 58 15676522 15676601 GATTTCGGCTTTGTTAGAATGG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302672 3 1 8 139 3R 16144744 16145299 ATAAGGCAACTGCTGATGC 58 16145402 16145420 TGCCAGCACTATAACTGCA 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 1 4 8 83 3R 16144000 16144712 CCTACAAAGAATCGCAAATTGG 58 16145293 16145311 TTGAGTTTAGCGGCATCAG 58 NA Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 2 1 1 65 3R 16407154 16407173 TCTACAGTTCCTACGAGGAG 57 16407051 16407069 TTAGATCTCCTAAGGCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Pi3K92E FBgn0015279 FBtr0083940,FBtr0083941 3 2 2 81 3R 16457433 16457513 ATTTGGGAACGCAGAAACG 59 16457370 16457388 GCTCCTTCCAATAGACGCA 59 NA Drosophila melanogaster 61 CG17267 FBgn0038821 FBtr0083931 2 1 2 80 3R 16563655 16563673 CCTACAGCCCTTACGATCC 59 16563489 16563507 CTTCCACATCCTCTGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0083960 2 1 8 128 3R 16618158 16618177 GAGAACTGCGGCATAATCTG 59 16618267 16620869 ATCATTTAGCTGTCGCACTG 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 1 4 4 80 3R 16882558 16883305 GCTATGAGTACATTGTATCAGCC 59 16882500 16882519 AATTGCAGTTAGAGCACCAG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 2 3 16 94 3R 17010983 17011003 CTTGATGTGCAATCCTTACCA 58 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0084125 1 1 2 80 3R 17568321 17568339 AAGATGTTTCATCACGCCT 57 17568380 17568476 CACGCTATAACGATATTTCTCC 57 NA Drosophila melanogaster 61 GABA-B-R2 FBgn0027575 FBtr0084168 1 1 2 80 3R 17597667 17597688 ACTGAACGATGACATTGTTAGG 58 17597546 17597628 GTCATCTCGGTAACTTCTGTG 58 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0302856 2 1 3 96 3R 18515732 18515812 CTCGATAATTCCATAGAGCCC 57 18515656 18515674 CATCCTCGTGTCCATTGTG 58 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 1 2 3 131 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542764 18542940 GTAATGCATTTGGATACTGCC 57 NA Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 1 2 2 102 3R 18981603 18981621 CCGGAGATCTACAAGTCGA 58 18980678 18981537 CCATTGAGCAAGGTTCCAC 59 NA Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 2 1 1 69 3R 19362176 19362194 CATATACGTGTTGCCCAGC 59 19362072 19362092 TAAAGTCCAGAACTTGGTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 2 4 4 81 3R 19554870 19555665 TGTGAAGAGAAGCCTGGAC 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084511 1 1 2 88 3R 19782928 19782947 GGCCTATGTGGATGATACCC 59 19782711 19782877 TCTCGACAGAGTTGGATCG 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0100517,FBtr0100518,FBtr0100519,FBtr0100520 3 4 7 193 3R 19985468 19985486 CACAGGCGTCATAAATCGC 59 19985036 19985204 CCGTTATACGGGTAATGGGT 59 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084615 2 1 2 80 3R 20195899 20196026 TATTATGATCCCGAGGATATGCG 59 20196064 20196084 ACTGAAACCATCAAAGTGCTC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100633 1 1 18 110 3R 20523984 20528755 AATGGAGGGTGATATCACTCG 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 2 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521838 20527819 TGGTGTTCATCTAAGTCATCG 57 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 2 2 2 142 3R 20691553 20691738 TTACCAAAGTGCAGGTGCT 59 20691844 20691862 CAGGATAGGCACCAGTTCC 59 NA Drosophila melanogaster 61 CG34349 FBgn0085378 FBtr0112558 3 1 2 100 3R 20883617 20885942 AGTGATGAATGTCACAGATCTC 58 20886002 20886021 ATTCGACCAAACTGTTTGTG 57 NA Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 3 2 2 82 3R 21505842 21505860 TAGTTCGGTCACCCAAACC 59 21505715 21505796 GGATCAAGCATGCCAACAC 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384 3 2 7 148 3R 21535228 21535754 GCAGTGCAATAGGACATGTC 59 21535099 21535117 AATTGGATCCGCATTTCGC 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 2 2 7 153 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573920 21573939 TATTCATCCGGTGAACAGGT 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 2 4 5 131 3R 21870340 21871201 ATCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100012 1 1 2 80 3R 22175888 22181333 CGCATATGATCGGTCTACTG 58 22181376 22181394 CGGCATTATACTGCTGACG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 1 12 12 80 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891688 22891709 TGCTTGCAGATTGGATTATAGC 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 1 5 5 80 3R 23392369 23392389 GCGATTCATTTACGAAACGGA 59 23392245 23392329 GCGAATCCGTTGATGATACTG 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 3 5 5 81 3R 23392371 23392392 CTTGCGATTCATTTACGAAACG 59 23392247 23392331 GAATCCGTTGATGATACTGCC 59 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 1 5 5 80 3R 23392369 23392389 GCGATTCATTTACGAAACGGA 59 23392245 23392329 GCGAATCCGTTGATGATACTG 59 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 1 4 4 80 3R 24146990 24147104 TATGAAACAGGTCAACTGTACG 58 24146931 24146949 CACCTCCAACTTCTCACCA 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324 2 1 6 140 3R 24638553 24638691 CAGATAGAGGATGACGCTG 57 24638793 24638813 CAGGGAGTCTACATTGTACTC 57 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085378 2 1 10 93 3R 24956913 24956935 GGTCACACTAGATTCATAGTTCG 58 24956988 24957860 CATCGGGATTGAGCAAGTG 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 3 2 2 145 3R 25004530 25006889 CAGAGTTCGATTATGCCAGTC 59 25004405 25004423 ATAGTGATTGGTGACGGGC 59 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 1 3 3 108 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046232 25046250 GAACTTGAAGTTGTCGGCC 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 2 3 4 113 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 CG31030 FBgn0051030 FBtr0110834,FBtr0085579 3 2 2 85 3R 25991688 25991764 ACATTGAAGTGGTGAGTCTC 57 25991622 25991640 GTAGGTATTCACGGCTTCG 58 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 3 2 3 158 3R 26134963 26183984 AAGTCAAGATTGAGGACGAGG 59 26184104 26184122 AGAAGGAGCCATCAACCAG 59 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681,FBtr0085683 1 3 3 149 3R 26351985 26352003 GACTTCTACGGTCTGCTCC 59 26345477 26348959 CTTGGCCTCCTTTAACTGC 58 NA Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 3 2 2 115 3R 26877544 26877562 ACCTTTAATGGTTACGCGC 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 1 3 3 80 3R 26987044 26989272 ATACTGCTGAGATACGGCG 59 26986982 26987000 GATGAGTTTGTCGAGCAGC 59 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 2 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 1 3 3 80 3R 27659963 27659981 TTTGCGAGACGAGGATCTG 59 27660025 27660106 CGACCATCTCCTGTACGTC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 2 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103363 106347 CGAGTTAAGCCCATCTTAGG 57 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 3 4 8 81 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162749 162840 GCAGATGAACCCAACAAGTC 59 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723 2 1 2 80 4 282674 283017 CATTAATGTAGTAAGTCGCAGAGG 59 283056 283074 GGTCCTGGACGACTTATCC 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 1 6 6 80 4 370149 370171 GATGAAGAACATATTGGGTCAGG 59 370035 370110 TCGAGTATAACATCGCCGAC 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 2 6 6 80 4 375180 375316 ACGACTTAAAGGTGGACGA 58 375118 375138 AAACCATGGGATCAACATCTG 58 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 1 6 7 81 4 470584 470875 AATGGAACGCGGTTAACTC 58 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 2 4 6 108 4 640794 640889 TGCTCAACAGATATCCAGGT 58 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 2 3 3 80 4 663046 663128 CCATTCTTGAGTCAGAGCCA 59 662985 663004 GTGATTGTTCCAGTGTCTGC 59 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0301341 1 2 3 87 4 750191 751410 TAACTTTCAAGGTGCGAGC 58 751459 751479 CAATGTGCCTGATTCATTTGG 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 1 9 9 80 4 1068496 1068515 GGATATCTGTCTCCTGAGGT 57 1068342 1068456 GTAAAGAATAACTCCACATGCC 57 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089195,FBtr0089194 3 2 3 97 4 1152011 1152121 TTAATGGAAAGGCGTGCTG 58 1152179 1152200 CCCAAGTTCATAAATGGTTTGG 58 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114272 2 1 4 151 U 3443382 3443400 AAAGTGTAGTGGTCACCGT 58 3443515 3448775 TTTGCAGACCCTTCTTCGT 59 NA Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 2 3 3 98 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242175 242193 CTACTGATGTGGCATCTGG 57 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273443 3 1 4 117 X 312536 322080 CATTGTACATGTGGCAAGTC 57 211890 211910 ACTTTAGTACAGTGATTGGCG 58 NA InUTR Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 1 4 4 86 X 423498 423516 GTTCGCCAAGAACTTGGAC 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 2 4 4 81 X 522709 522793 CTTGAAGAACATCCAAACCCG 59 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070133,FBtr0070130 3 5 6 87 X 640137 640556 CAAAGAAGCGAGACGACTC 58 640606 640625 AGTATGTGATAGCTGACCGT 58 NA Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 3 2 2 81 X 818648 818788 CGGACAACACAGTCAATATCC 59 818587 818606 TAGTAGATGTAGCGCAGCAG 59 NA InUTR Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 2 2 3 84 X 1365374 1365451 TCTCGCACGAGTATTACGT 58 1365499 1365517 ATGAAGGACATGGTCACGA 58 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 1 2 6 171 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387283 1395835 GTGCTTAGAATTGCCGTCG 59 NA Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 2 2 2 112 X 1814943 1814961 ACTAGTGGCCATAAACGCA 59 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 1 2 3 92 X 1924301 1924324 TCCTCTGGAGAATCTTAATACTGC 59 1923944 1924254 GGAGTGTTGATCAAATCATCTGG 59 NA Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 2 2 2 92 X 2268795 2268814 ATATCTACTCCACGTCGGAG 58 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 3 2 2 92 X 2490993 2491011 TCAAGCTCTTTCACAAGCC 58 2491378 2491396 TTCCGTTGTCAAAGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 1 2 2 96 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024843 3024861 AATCCATTGACCACAGCCT 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 1 4 12 121 X 3175076 3175094 TTGAGTCCAATTCACGCAC 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 1 3 3 81 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299579 1 1 8 80 X 3618889 3675692 AATGAGCCGCTTTAAGATGTC 59 3675733 3675752 GGATGGTGTTGACTTAGGGA 59 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112802 3 1 3 183 X 3740226 3744283 CAGAATATAGCTTGCTGCCA 58 3744429 3744447 GGAAACAGGTGATGTTGGG 58 NA InUTR Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 1 3 4 80 X 3846007 3846025 GTGCCAATACTAGCTCAGC 58 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 1 6 6 80 X 4844924 4845007 TGGAGGATTTAAGCTCTCCC 58 4845047 4845068 CTTGAACCTCGAAACGATACTG 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 1 5 7 96 X 5277596 5277614 GACAATATGTCCGGGAACG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 1 2 2 81 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187708 6187726 CTTGCGCTTCAGGAAATCC 59 NA Nonspecific Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 3 2 2 153 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425326 6425344 TGTCGTTGTTATCGACGGT 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 2 3 6 106 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680750 6680768 CAATCTCCGAATTGCTGCT 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 2 5 6 106 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 3 2 2 80 X 6868808 6868826 CGTGTTCATCTGGTTCTGG 58 6868668 6868766 ATAAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100215,FBtr0100217,FBtr0300840 2 4 21 81 X 6986732 6986756 GTCCTACTATAACTTTAAGATGGCG 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 3 2 2 118 X 7235526 7235615 ACTTGTTTAAGGCTGTGGAC 58 7235695 7235714 TATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 2 4 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442550 8444125 TCATTCATGCCTGTATCGC 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071271,FBtr0071270 3 2 10 86 X 8770365 8770388 GAGTAAATCATTTAGAGACGAGCG 59 8769884 8770074 GGTTCATCACCCATGTCGA 59 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 2 3 4 89 X 9673267 9674283 CGAATGAGAGTCGTGTTCC 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112966 2 1 2 168 X 9782737 9782827 TTTCTATTAGTGGAGAGGAGAATGG 59 9782525 9782611 TACTTGGTGGCGTTTAGGG 59 NA Drosophila melanogaster 61 CG15252 FBgn0030167 FBtr0071426,FBtr0112970 2 2 2 162 X 9873643 9873809 ACTTTCTGAGGCTCATGAC 57 9873382 9873400 TTTCGGTTTACCTTTGGCT 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0299633 2 1 8 80 X 10201977 10201996 ATATTACAATGGGCATCGCC 58 10173215 10201937 GTTCCATCATCTGTTTAACGTG 58 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 1 3 4 96 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0301288 2 2 15 84 X 11270677 11270695 TCTGGTCAACGATCTTCGG 59 11270741 11270884 CGATGAGCTTTCTGTATGTCC 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 1 3 3 236 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 1 4 4 160 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444959 11445070 TCAATCCATCTTCTATGCGCT 59 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 2 2 4 163 X 11567985 11568087 CATACAAATCCCAGCTCGA 57 11568214 11568232 TGCTGTAGCGTATTGTAGC 57 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 3 4 10 85 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848300 11856056 GTTGATTGAGTTCGACCCG 59 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 2 2 2 111 X 12416750 12417559 ACAATTCAGACTCCTCGGC 59 12416657 12416675 TGTGAAGCACTCTGGACAG 59 NA Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 1 2 2 86 X 13304291 13304382 TGCTAAAGGTGATCTGGTG 57 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787 2 1 2 191 X 13306683 13306701 CAAATAGCATGGGCCTCTC 58 13306440 13306530 CCTTGGCATTATCATTCAGGT 58 NA Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026 3 1 2 199 X 15038451 15038469 CGACAGTGTCAACATCCAG 58 15036018 15038288 GTGTGGTTCGGTTTCTTCG 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0074008 1 3 4 123 X 15232717 15232735 TACTTGGCGGAGAACAAGG 59 15232954 15233674 CTCCGCTGTCTAGTGATCG 59 NA Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 3 3 3 80 X 15276621 15276641 CTCTCCATGAACAACATACCC 58 15276371 15276581 ACTATGAAAGCTGGGAAACTC 58 NA Nonspecific Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 2 5 9 133 X 15714507 15714525 GAACCAGGAAGCAAGTCAG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 CycD FBgn0010315 FBtr0300391,FBtr0300393,FBtr0300392 1 3 3 103 X 15802347 15802585 CGAATGGATGATGGAAGTGTG 59 15802264 15802282 TGCGTACTGATTTGCTCGA 59 NA Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 3 4 4 81 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 3 5 5 84 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 2 2 2 63 X 16182294 16182312 TTTGTTTCTCGGCATGCTG 59 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 3 4 4 84 X 16193750 16193839 AGCTATTTGATCAAACTGGCG 59 16193885 16193903 TCTCGATGCGTTCTCTGAG 59 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0074298,FBtr0111023 1 2 4 80 X 16371597 16375370 GTGATTGTCATGGTATCGCT 58 16371536 16371554 TCGCATAGTCTTGAAGGCT 58 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074370 2 1 7 256 X 16588375 16588658 AAGCATGTCACTAGCAGCT 59 16588137 16588155 CATCGTGCTTATGACGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074366 2 1 7 80 X 16588444 16588876 CGTGTAGGTCAAGTACTTACCT 59 16588385 16588405 GCTGCCACATTAAATTGACAC 58 NA InUTR Drosophila melanogaster 61 f FBgn0000630 FBtr0110991,FBtr0074423,FBtr0074420,FBtr0074422 1 4 6 86 X 17165361 17165379 ATCACGGAGCCAAATTGTC 58 17165429 17165530 CATTCAGGCACTCAACCTG 58 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 2 2 2 80 X 17497496 17497738 ACAAAGAGGGTCTCTTGGA 57 17497781 17497800 CAAGTTGAGTGGATCCAAGG 58 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 3 2 2 115 X 17595801 17596244 TCATGAGTTCGCAATACTCG 58 17595705 17595723 GATTAGCACCTTGATGCCT 57 NA InUTR Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0112999 3 1 2 80 X 17938910 17938929 CTCAAACAACATCTGGACGA 58 17938969 17939069 TACACCAGGTCTATCAATTTCC 57 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0113316 1 1 3 93 X 19159261 19159280 CTACATCTACAGCGAGGACG 59 19159336 19163302 ATTGTCGGTGGTAACCTCG 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733 3 1 2 186 X 19499544 19499565 AGGCTAACAAGAGGAATATCCC 59 19499712 19504428 GAGTTTGTCGTTGAGCTGG 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089409,FBtr0089408 3 2 13 80 X 20107010 20107164 GTCAAGAGGAAAGTAAAGTGACG 59 20106952 20106973 ACTCATATGTTCTCCTATCGCC 59 NA InUTR Drosophila melanogaster 61 CG33714 FBgn0064117 FBtr0091704,FBtr0091703 1 2 2 60 X 21189955 21189975 CGTTAGCTTCAACAGTTTGAC 58 21189915 21189933 CAGTATGTGCTTCTGCTCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 1 2 8 83 X 21247619 21247637 ACTGGAGAGCTAATACGCG 59 21247682 21251008 TTTCATCAGCGTCATGTTGTG 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 3 2 4 142 X 21296198 21296519 CCTATATGAAATGGAGCGTCCT 59 21295932 21295951 CGCGGTCCTTATAGAGTCTG 59 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 3 5 5 97 X 21473853 21474023 TAATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070056,FBtr0070057 2 2 2 191 X 21478401 21478542 CATGAATCGCAACCTCTCG 59 21478228 21478246 TTGATGTCCGACATCTCGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0301957,FBtr0077373 1 2 9 96 X 21499771 21501010 AGGCATTTACAATCCCAATGC 59 21499695 21499713 TAAAGCCACCGGAGAAGAC 59 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113683,FBtr0113682 2 2 3 192 XHet 23265 25002 TAAGAAGAATGAACACGCGG 58 25157 25175 TCTAGCACTGGGAACAGTG 59 NA Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 1 2 2 80 XHet 77302 77323 GAAGGACTATATCGCATTCGAG 58 77361 77440 ATGTAATCCTTAGATCGCTCCA 59 NA Drosophila melanogaster 61 tRNA:G3:53E FBgn0011867 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:55E FBgn0011868 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U31:54Eb FBgn0063380 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:T:90Cb FBgn0011994 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31162 FBgn0051162 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41507 FBgn0085790 FBtr0114243 3 1 1 80 YHet 313038 313058 TACGAAACTGGAACAGAAACC 58 312907 312999 AGCTCTTGATCATCCTTTACTG 58 NA Nonspecific Drosophila melanogaster 61 CR41507 FBgn0085790 FBtr0114243 2 1 1 65 YHet 313027 313048 GAACAGAAACCATTTGACATGG 58 312912 313004 TTGATCATCCTTTACTGCTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mst FBgn0020272 FBtr0077211 2 1 1 60 X 21260076 21260094 GAACGTACGCGAATTACGT 58 21260117 21260191 TACCTAAAGTTGGCCTCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1722 FBgn0031168 FBtr0077237 1 1 1 60 X 21121743 21121762 CAGGACCAGACTCATAGACG 59 21121702 21121721 GAACAGTACCGAAGTACCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32512 FBgn0052512 FBtr0077262 2 1 1 80 X 20937678 20937696 AGATGACTAGGCAGGTGTC 58 20935060 20937635 GCGTCAGAATTGTGTACAGG 59 NA Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077243 2 1 2 61 X 20914317 20914713 TTCAAGACGAAGACCTTCG 57 20914738 20914756 AACTTGACCTTCAGCTTGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 inx6 FBgn0027107 FBtr0077339 3 1 1 122 X 20139767 20139861 CAATGTGTTCATCAGCATCCT 59 20139665 20139683 ATCAGGTTCCAGAGGTTCC 58 NA Drosophila melanogaster 61 inx6 FBgn0027107 FBtr0077339 2 1 1 121 X 20139766 20139860 AATGTGTTCATCAGCATCCTC 58 20139665 20139683 ATCAGGTTCCAGAGGTTCC 58 NA Drosophila melanogaster 61 Sdic2 FBgn0053497 FBtr0089610 3 1 1 80 X 20080290 20080377 GTATTCTACTTTGAGCGGCG 59 20080229 20080248 TTTGGTGGAATGTTCGTAGC 58 NA Nonspecific Drosophila melanogaster 61 CG34332 FBgn0085361 FBtr0112534 1 1 1 91 X 20035245 20035319 CTTACACGGAGGAGATCCAG 59 20035367 20035391 GTACAGTATTTCACATTCCTTCTCC 59 NA Nonspecific Drosophila melanogaster 61 amn FBgn0086782 FBtr0074802 3 1 1 139 X 19781356 19781374 GCCAATTCGAACAGCTGAG 59 19781235 19781253 GTAAGAGCGCTTACAGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 2 3 3 80 X 19795513 19795912 CGTATATGGAATATCCACCGC 58 19795952 19795972 CAATATGAGGCCCAGTATGGA 59 NA Drosophila melanogaster 61 Mer FBgn0086384 FBtr0074754 3 1 1 125 X 19587274 19587478 AAACAATCGACCATCAGCC 58 19587167 19587185 CATCTAGTGGCACGATTCC 58 NA InUTR Drosophila melanogaster 61 CG7889 FBgn0031003 FBtr0074675 1 1 1 60 X 19138670 19138688 ACAAGTTCATGACCCAGCT 59 19138773 19138791 GATACGTTCGCACATGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7349 FBgn0030975 FBtr0074648 3 1 1 138 X 18789921 18789995 ATTGATTCCAGGGACGAGG 59 18790097 18790115 GCTGAATGATGGCTCTAGC 58 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659,FBtr0074656,FBtr0074658,FBtr0074657 2 4 4 60 X 18689422 18689440 CAGTTGACCAGCAGAAGAG 58 18689380 18689398 TTGGTCTTTAGGACGGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6891 FBgn0030955 FBtr0074631 2 1 2 123 X 18669636 18669654 CAATTGGTGGAGAGCAAGC 59 18674792 18674810 ACTTGAATACCGCCCACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606,FBtr0074605 1 2 2 90 X 18641011 18641029 AACAGCAGTTAGGAGAGCA 58 18640886 18640904 GTCAAATGGATGGCAAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33639 FBgn0053639 FBtr0091616 3 1 1 136 X 18114033 18114051 ACAACACCGAAGAGGATCC 59 18112631 18113935 CTCCACATCCCGATAGAAGTC 59 NA Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 3 2 2 81 X 17992531 17992620 GTGAATGATATACCTACACTGCC 58 17992472 17992490 AGATCTGACGTTCCAGCTG 59 NA Drosophila melanogaster 61 dik FBgn0030891 FBtr0074510 2 1 1 60 X 17980295 17980315 GAAAGCGGAGTATGATAGCCT 59 17980337 17980355 GTCGAGCTTTCTTCGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836,FBtr0302835,FBtr0302837,FBtr0302834,FBtr0302833 2 5 5 93 X 17640916 17641005 GTCATGTCCACCATAGATCTC 57 17641060 17641078 GTACCTGGAAACAGTGACG 58 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0290020 2 1 3 84 X 16995976 16996436 ATGTTGTCAATGCAGCAGC 59 16996482 16996502 GTCTTCCGGTTATTTCCAGTG 59 NA InUTR Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074380,FBtr0074381 2 2 2 65 X 16973541 16973559 CTATTTCCACGGCAACGAG 59 16973588 16973606 TGGGAGACCATGATCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wus FBgn0030805 FBtr0074418 2 1 1 91 X 16834013 16834544 GCAAGTGGTAATCCGATTGG 59 16833941 16833960 TCCTTTGGAGGTATCGTTGG 59 NA InUTR Drosophila melanogaster 61 CG4789 FBgn0030792 FBtr0074333 2 1 1 172 X 16695460 16695478 CTTCTCAACGGACAACCTC 58 16695614 16695698 CACACTTGTCGGCTATTCC 58 NA Drosophila melanogaster 61 TwdlZ FBgn0052569 FBtr0290248 3 1 1 60 X 16632265 16632285 CAAGGATCGCGTTATTTACCA 58 16632306 16632325 ACTGCTTGGTTATGATGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlZ FBgn0052569 FBtr0290248 1 1 1 60 X 16632267 16632286 AGGATCGCGTTATTTACCAC 58 16632307 16632327 AAACTGCTTGGTTATGATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9723 FBgn0030768 FBtr0074376 2 1 1 80 X 16548216 16548234 ATTCTGATCACCTACCGCG 59 16548087 16548173 AATGCGATAGCAGATCAGGA 59 NA Drosophila melanogaster 61 CG9947 FBgn0030752 FBtr0074301 3 1 1 86 X 16334743 16334761 GAGTATCTGGAGGCCAACC 59 16334431 16334698 CATGTATACCACACCATTGAAGTC 59 NA Drosophila melanogaster 61 CG9981 FBgn0030746 FBtr0074304 2 1 1 80 X 16297169 16297189 CTAAAGGAGGGATTGGAAGAC 57 16297038 16297131 GTTCCTTATGACAGTTACTCTGG 58 NA Drosophila melanogaster 61 CG15916 FBgn0030704 FBtr0074117 2 1 1 60 X 15785403 15785421 GATGCGACAGGATTTCCTC 58 15785445 15785463 CTTGCCGAGAATCTTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0074102,FBtr0113440 1 2 2 86 X 15730228 15730322 TCTTAATCTATGAGGGCATGAC 57 15730369 15730387 AAGACTACCGCAAATCTGC 58 NA InUTR Drosophila melanogaster 61 Paf-AHalpha FBgn0025809 FBtr0074191,FBtr0074190 3 2 2 234 X 15678788 15678806 TGTGGGCACCAATAATGTG 58 15678504 15678522 CAAACCCTTGTCAATGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6324 FBgn0030647 FBtr0074037 1 1 1 83 X 15374495 15374513 TCGGAGATGCAAGAGATGG 59 15374559 15374675 CTCTCCAGACTGATTCTCGT 58 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290064 2 1 5 82 X 15272272 15272290 TTTCCAGGACGCTACAGTC 59 15265708 15272228 GCGAAGATATCACCAGATGGA 59 NA Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021,FBtr0074022 1 2 2 60 X 15165607 15165625 ACCTGATGGGCATCATCAG 59 15165565 15165585 CATACCACATGCAGATAGACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5347 FBgn0030578 FBtr0073936 1 1 1 60 X 14671175 14671195 GGTGTCCAGGATATTTGTCCA 59 14671217 14671235 GATACGAGCACTTACTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12540 FBgn0030570 FBtr0073929 3 1 1 199 X 14390355 14390582 CAGGAAAGTTCAACGCGTC 59 14390745 14390763 GAGTAAACCGACGAATCGC 59 NA Drosophila melanogaster 61 CG9411 FBgn0030569 FBtr0073916 1 1 1 73 X 14368724 14368742 AATGTGATCACCGGACCAG 59 14368594 14368612 TCATCCAGGGAACCAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Rtc1 FBgn0020909 FBtr0073820 1 1 1 103 X 13652108 13652192 GAGGAGTCGGAGGATACAC 58 13652259 13652277 TAGCTGGAGTCTACACAGC 58 NA Drosophila melanogaster 61 CG42237 FBgn0250862 FBtr0073722 3 1 1 81 X 13015747 13016152 CGAAATCTACAACGATAAGGAGG 59 13016190 13016211 GTCGAATTTGATTTCCAATGGG 58 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 1 2 5 85 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483127 12483145 AATCACTAACTGGTGTGCC 57 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 1 2 5 84 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483127 12483145 AATCACTAACTGGTGTGCC 57 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 1 1 1 60 X 12447485 12447505 CAAATTCCCATCGTTAGGAGC 59 12447527 12447656 AACCGAAGTTGTAGTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 2 2 2 111 X 12416750 12417559 ACAATTCAGACTCCTCGGC 59 12416657 12416675 TGTGAAGCACTCTGGACAG 59 NA Drosophila melanogaster 61 CG42251 FBgn0259109 FBtr0299533,FBtr0299532 1 2 2 110 X 12416749 12417558 CAATTCAGACTCCTCGGCT 59 12416657 12416675 TGTGAAGCACTCTGGACAG 59 NA Drosophila melanogaster 61 SelG FBgn0030350 FBtr0073570 3 1 1 80 X 11781432 11781519 GGTGTACATCGACCATAATGG 58 11781561 11781579 ATCCCGACAAATAGCTCCA 58 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533,FBtr0073532,FBtr0073534 3 3 3 60 X 11571813 11571832 GGCGAGGATATCAACATCGA 59 11571772 11571792 CGAACTGATTGTACAGTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spase25 FBgn0030306 FBtr0073506 3 1 1 74 X 11379411 11379430 GAGAGCAGATAGAAGATGGG 57 11379596 11379614 CCACTTGTTGACCTTCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Imp FBgn0030235 FBtr0110967,FBtr0301409 3 2 10 88 X 10692589 10692661 CGAATAAGGGTGAACTCTCC 57 10692520 10692538 CTTGCCAATGATTCGTCCA 58 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112687,FBtr0112688,FBtr0112689 3 3 4 96 X 10393679 10404377 GAGGAAGGGACCTTCATAGTG 59 10393603 10393621 AATGCTCGATGTAGGGTCC 59 NA Drosophila melanogaster 61 CG34319 FBgn0085348 FBtr0112521 2 1 1 60 X 10149201 10149539 CTATCAACTACAAGCGCGA 57 10149159 10149177 CGTATCTCAAAGTCCAGCA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Yp2 FBgn0005391 FBtr0071424 3 1 1 85 X 9946439 9946457 AACCTGAAGGAGGTTACCC 58 9946304 9946391 GACAGATGGTAGAGCTTGTC 57 NA Drosophila melanogaster 61 CG33557 FBgn0053557 FBtr0091534 3 1 1 85 X 9903659 9903677 CGCAAGCTTTCAAAGATCG 58 9903724 9903801 CATTCAGTGCCTGTTTCTAGG 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0071409,FBtr0112969 1 3 3 91 X 9860422 9860502 CAATCTCACCAACCCATTTGG 59 9860555 9860573 CATTTAAGAAACCGCGCCA 59 NA Drosophila melanogaster 61 CG9689 FBgn0030159 FBtr0071390 3 1 1 263 X 9776582 9776602 GTGAAGCACTTAGTTAAGCAC 57 9776888 9776908 GAACTACAAACACATTGACCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3106 FBgn0030148 FBtr0071403 3 1 1 115 X 9556479 9556499 GATTCAAACCTACGAGGATCG 58 9555446 9556402 ATGTGTCGGGAAATTCCAG 57 NA Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071267 1 1 2 90 X 8799407 8800149 TCGAACGGATCACCATGTC 59 8799335 8799353 TTGACGCTCTCGTAGTCAC 59 NA InUTR Drosophila melanogaster 61 Gbeta5 FBgn0030011 FBtr0071189 2 1 1 60 X 8045461 8045480 TCTGGTCATGTCGTTCAGTC 59 8045420 8045442 GGAACTTAACGCTATTCACATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2116 FBgn0030003 FBtr0071152 2 1 1 60 X 8024199 8024218 TGAAGGATTTGACGGATGAC 58 8024239 8024259 CTCATATCCAATTCCCTGACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2254 FBgn0029994 FBtr0071116 3 1 1 99 X 7973952 7975477 GAAAGTGACGCAAAGTGCT 59 7973871 7973889 TTTGACGATCAGCATCACG 58 NA Drosophila melanogaster 61 RpS6 FBgn0004922 FBtr0071135 1 1 2 97 X 7795029 7795285 CAATATGAAGCTCAACGTTTCC 58 7794953 7794972 TACGCTTCTCGTAGAAGACG 59 NA InUTR Drosophila melanogaster 61 CG4586 FBgn0029924 FBtr0071003 3 1 1 141 X 6864998 6865124 CATTGCCACCAGGTATTCC 58 6865229 6865247 GGATACCAGGCGATAGGAC 59 NA Drosophila melanogaster 61 Ctr1A FBgn0062413 FBtr0070951 3 1 1 105 X 6559627 6559646 TCTGCTGGAATATCGACCTG 59 6559714 6560895 CAGCATCGAAGGTTGAACG 59 NA Drosophila melanogaster 61 dx FBgn0000524 FBtr0070914 3 1 1 142 X 6431031 6431120 GATTGTTTACGACATTGCATCG 59 6431223 6431241 CAATCTTGAGGAAGCGCAG 59 NA Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070907 1 1 2 69 X 6246457 6246475 TAATCGCATTGCCATGTCG 59 6246508 6252946 ATTTGGCAGTTTCTGTGCC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3446 FBgn0029868 FBtr0070924 2 1 1 70 X 6244079 6244164 TACTTCACAGGCTTCACCA 58 6244027 6244045 AAGTAGTAGATGCCCAGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3842 FBgn0029866 FBtr0070903 1 1 2 122 X 6233624 6236116 AAATTCGACTAAAGCGGAAGAG 59 6236199 6236217 AATACTGTTCCTGGCACTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3823 FBgn0029863 FBtr0070900 1 1 1 91 X 6200317 6200425 AGGAGCAGAGGGATTATCTG 58 6200479 6200497 GACTCCGGAATCACTTGAC 58 NA Drosophila melanogaster 61 CG15896 FBgn0029858 FBtr0070898 1 1 1 80 X 6186687 6186771 CTTGACCAGCAATCTGTCG 58 6186813 6186833 GAGAAGAAGTCTGTCTCCTGG 59 NA Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952,FBtr0070868 1 2 2 60 X 5938617 5938637 GTATGCTATGTGTTTGGATGG 57 5938727 5938747 CAGATTCAAACTGTTGCTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15767 FBgn0029809 FBtr0070813 2 1 1 60 X 5684164 5684183 CTTAAGGTGTCCCAGTACGA 58 5684204 5684224 GTTAAACACCTCATTCTCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15773 FBgn0029795 FBtr0070806 3 1 1 193 X 5627567 5627585 ATGGGATTCTATCCCACCG 58 5627740 5627959 GTTACAAGGGTATCTTGCTCG 58 NA Drosophila melanogaster 61 CG12681 FBgn0029730 FBtr0070717 3 1 1 60 X 4771018 4771036 TAATTCGGTCAAGGACGCA 59 4771057 4771078 ATCTAGGTTAGCGATTAACGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6978 FBgn0029727 FBtr0070715 3 1 1 60 X 4678542 4678566 CTTCTTCTATGGCTATGTGATAACC 59 4678581 4678602 ACCGTAGTATTTGATCATCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15471 FBgn0029726 FBtr0299601 1 1 2 68 X 4676732 4676804 ATCAAACCGAAGCTATGGC 58 4676682 4676700 GCATTCGACTACAGTTGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2871 FBgn0029725 FBtr0070734 3 1 1 60 X 4671071 4671092 CAGTGAGTTTGAGTGGTATGAC 59 4671032 4671052 ATCATCCTCTCCAAACGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7024 FBgn0029722 FBtr0070712 2 1 1 127 X 4599601 4599619 TGAAGTTCAGTTGTGTCCG 58 4599710 4600046 CTTGAACGTGTTCTCCAGG 58 NA Drosophila melanogaster 61 Pp2C1 FBgn0022768 FBtr0070685 2 1 1 94 X 4579209 4579229 TTCTGGTCTGATCAGGATGAG 59 4577958 4579153 GGCCATTTCTCTTGTTCCC 58 NA Drosophila melanogaster 61 Xpac FBgn0004832 FBtr0070670 3 1 1 103 X 3998013 3998031 CCAAGTTGGTTTCGCATCC 59 3997863 3997881 CTGCACCTTGATCACAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 AlstR FBgn0028961 FBtr0070575 3 1 1 88 X 3539716 3539737 GATCGTATCCACAATAGTTCCC 58 3539785 3549622 CCACAACCACCAGAATAACC 58 NA Drosophila melanogaster 61 Pig1 FBgn0003086 FBtr0070537 1 1 1 60 X 3142966 3142990 ACGGATTATGATACACCTACTACAG 59 3142930 3142948 CCTTCTTCCTATTGGCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 N FBgn0004647 FBtr0070507 1 1 1 82 X 3063649 3063761 GATTGCATCAAGAATGCGC 58 3063804 3063825 GAGTAGGCATAATTATCCAGCT 57 NA Drosophila melanogaster 61 CG32793 FBgn0052793 FBtr0070550 3 1 1 278 X 2823946 2823964 AAACCATGACCAAGTTCGT 57 2824350 2824368 GCGGGTGGATGATAAAGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 3 1 1 104 X 2221589 2221607 TGAGGTCATGTAAGCTGCT 58 2221846 2221864 TCACCGGTTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 kz FBgn0001330 FBtr0070419 1 1 1 80 X 2132203 2132282 AATAGCGATCCTCACTTCCT 58 2132142 2132160 CCATAAAGGCGTCAGTTCG 59 NA Drosophila melanogaster 61 Mct1 FBgn0023549 FBtr0070393 1 1 1 80 X 2092963 2093860 GATACACATAGTTACCGATGGC 58 2093900 2093919 TTGCCCTCGTTGAAATAGTC 58 NA Drosophila melanogaster 61 CG14818 FBgn0026088 FBtr0070364 3 1 1 87 X 1773373 1773452 CCTCCAAGAGATGGAGGAC 58 1773304 1773322 CATAATGTCGTCTGTGCGC 59 NA Drosophila melanogaster 61 CG14803 FBgn0023513 FBtr0070310 2 1 1 87 X 1763267 1763340 CGAGGCCTGTAAGAATGTG 58 1763391 1763409 ACCAGAGTTCATAGAGGCG 58 NA Drosophila melanogaster 61 CG42259 FBgn0259144 FBtr0299571 1 1 1 141 X 940510 940528 ACTCGACGATGCTTCACTC 59 940708 940726 GTTTGACAATCGGGACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 vnd FBgn0003986 FBtr0110929,FBtr0070110 3 2 2 80 X 488325 490393 AGAACGAGCTATACGGTACC 58 490435 490454 TGTAGGTGTACGACACTTCC 59 NA Drosophila melanogaster 61 cin FBgn0000316 FBtr0070064,FBtr0070065 3 2 2 80 X 150606 150624 TATGCCATGAAGTCCACTG 57 150665 150806 CAAAGAATTAGGTGAATCTCCG 57 NA Nonspecific Drosophila melanogaster 61 CR40574 FBgn0085749 FBtr0114199 1 1 1 272 U 9836255 9836278 GATATAGGTAGTGTAAGCTAGCTG 58 9836509 9836527 TGTCGTAAAGCAGCTAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 klhl10 FBgn0040038 FBtr0113685,FBtr0113686 2 2 2 88 U 1911199 1911217 GACCGTAATCCAGAAAGCC 58 1911269 1937082 TCCATGAAGCACTTTGGAG 57 NA Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302581,FBtr0114112,FBtr0114111 1 3 4 97 U 1243095 1243113 GTGGAGCTAGTGCAAACAC 59 1243171 1317231 GTTCAGCAATTGTTGTTCTCTG 58 NA Drosophila melanogaster 61 tRNA:K5:84ABa FBgn0011904 FBtr0081660 1 1 1 60 3R 2648732 2648750 TAGCTCAGTCGGTAGAGCA 59 2648690 2648708 GAACAGGGACTTGAACCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1638 FBgn0039855 FBtr0113315 2 1 1 107 3R 27416772 27416790 GAGCACGAATGCAGTTCTG 59 27416861 27416939 CTATTACAGCACCAAGCGG 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 1 4 4 107 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 1 2 2 80 3R 27215546 27215564 CGATGTTGTACCTCACCGT 59 27215608 27215683 CCACACCGATACTCAACCA 59 NA Drosophila melanogaster 61 CG3669 FBgn0039838 FBtr0113313 3 1 1 84 3R 27085024 27085042 GGAGATATCGATGAGGCGA 58 27085089 27085398 TGCGATTGGGATTCTTTACG 58 NA Drosophila melanogaster 61 CG15561 FBgn0039829 FBtr0085776 1 1 1 60 3R 27041181 27041199 CAGGGTGGAGGACATTGAG 59 27041139 27041158 CTTGAAGAGTTCCGCATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gycbeta100B FBgn0013973 FBtr0085753 1 1 1 80 3R 26980443 26980462 TGCTGAATGAACTCTACACG 58 26980502 26980664 CAACTGTTTCAACCTTGTACAC 58 NA Drosophila melanogaster 61 CG15534 FBgn0039769 FBtr0085644 1 1 1 97 3R 26257824 26257843 CATATTATTCGTCGGGTGCG 59 26257901 26258141 CTATGCTGGCTGATACAAAGG 58 NA Drosophila melanogaster 61 CG9682 FBgn0039760 FBtr0085617 1 1 1 98 3R 26077257 26077275 ATCAAGTGTCCCAGGAAGC 59 26077393 26077494 GCTTACTGACAGATTTCTTACTGG 59 NA Drosophila melanogaster 61 CG15531 FBgn0039755 FBtr0113309,FBtr0085572 1 2 2 81 3R 26021094 26021180 GTTTCAGAAGAGATTCTATGTCCTG 59 26021037 26021055 CCCAAAGTACTGGAACGGA 59 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888,FBtr0301073 3 2 2 82 3R 25699853 25699933 AAACTCAGTTCTGTTCGCC 58 25699979 25699997 AATATGGCACAAGTGACCG 58 NA Drosophila melanogaster 61 Vps16B FBgn0039702 FBtr0085533 1 1 1 60 3R 25641585 25641604 GGAGCAGTATCTGAGTTACC 57 25641544 25641562 CAGTAGCTCAATATGGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11843 FBgn0039630 FBtr0085363 3 1 1 93 3R 24880276 24880294 ATATGGAGGCTGTTCTCCC 58 24880348 24880509 TGTATCTAGAGCAAGATCCCAC 59 NA Drosophila melanogaster 61 htt FBgn0027655 FBtr0085310 1 1 1 80 3R 24545968 24546353 CGAACCCTTCTACTGAAGGA 58 24546394 24546414 CCAGCTCTCATCAATTATGCG 59 NA Drosophila melanogaster 61 CG12877 FBgn0039544 FBtr0100446,FBtr0300766 2 2 2 81 3R 23536243 23536339 ATTATACAGGAGAGCGAGGC 59 23536380 23536401 TGCGCAGATAATACTTGATGAG 58 NA Drosophila melanogaster 61 CG3368 FBgn0039508 FBtr0085163 2 1 1 60 3R 23111735 23111811 TGGTTAACGTTGAAGGGCT 59 23111834 23111853 TTTGCAATTGGTAACACCCA 58 NA DesignRelaxed Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 3 3 3 80 3R 22981219 22981298 AAACCCAGTGTGCTTATTGG 58 22981341 22981359 ATTGTTATCCGCCATGGTG 58 NA Drosophila melanogaster 61 NepYr FBgn0004842 FBtr0085100 2 1 1 96 3R 22883114 22883132 CAGCACTTCCTCTCAATCG 58 22883192 22883387 CACGATAATGGGTTCGCTC 58 NA Drosophila melanogaster 61 TwdlB FBgn0039436 FBtr0085057 2 1 1 126 3R 22449122 22449211 CATTCATTGTCCTGTGTTTGGT 59 22449017 22449036 GATCCACCACTGATAGAGCC 59 NA Drosophila melanogaster 61 TwdlM FBgn0039434 FBtr0085029 1 1 1 60 3R 22444893 22444989 GTGCCTTCATTGTTATGTGC 58 22445010 22445030 TAGTTGTAGCCGAGCTTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5447 FBgn0039427 FBtr0085012 2 1 1 136 3R 22278737 22278822 AGGGCATGATTGAAAGACAC 58 22278918 22278939 CATATAGATCAAGTAGGCCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Hex-t2 FBgn0042710 FBtr0085011 2 1 1 80 3R 22277006 22277113 AGAATGTGGTGAGTCTTCTC 57 22277156 22277174 TATCGTTGAGAATGGCGAC 57 NA Drosophila melanogaster 61 CG5024 FBgn0039373 FBtr0301962,FBtr0084902 3 2 2 60 3R 21637229 21637250 AGTTATCCTCGCTTTCAAAGTC 58 21637267 21637289 CTCATTCTCGTGTATAAAGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 3 3 3 85 3R 21511212 21511298 AACTATTTGGATCACCCAGCT 59 21511147 21511165 TTCATGACGTAGCTGAGGG 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG5116 FBgn0039339 FBtr0084877 2 1 1 95 3R 21309511 21309583 GGATGATCGAGCCTACGAC 59 21309641 21309660 ACATACGGTTGGAGGATGAG 59 NA Drosophila melanogaster 61 CG11910 FBgn0039332 FBtr0084846 1 1 1 60 3R 21207042 21207061 AGATCAAGACATTCACCGAG 57 21207001 21207019 TCCAACATGCGATAGACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10559 FBgn0039323 FBtr0289942 2 1 1 80 3R 21140577 21140661 ATGGACGAGTTGGGTATCAC 59 21140516 21140536 CGGTCAGATTTGCATCTTCAG 59 NA Drosophila melanogaster 61 CG10514 FBgn0039312 FBtr0084864 3 1 1 69 3R 21104413 21104495 GCTTTGCATTCTACGGTAGTG 59 21104364 21104382 CATTGAAACAGGCATCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11851 FBgn0039293 FBtr0084808 3 1 1 171 3R 21048523 21048599 AATATTATTTGGCTCCTGGCAC 59 21048731 21048749 GAAAGCGCTCTTCCTTGTG 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 1 3 3 80 3R 20677647 20677717 GCTGTTCCTCAACCTACTC 57 20677758 20677779 TGCTAAGAAGAAATTCCAGGTC 58 NA Drosophila melanogaster 61 Esp FBgn0013953 FBtr0084703 2 1 1 80 3R 20674116 20674134 ATCACAGTTGGTCTCACCG 59 20674177 20674266 ATACAAGCCATAGGCTACGG 59 NA Drosophila melanogaster 61 CG5808 FBgn0027617 FBtr0084738 2 1 1 84 3R 20641089 20641109 AGGAAGACGTAACGATGAGAG 59 20640963 20641043 GTTCCTGGATTGTTGCCTC 58 NA Drosophila melanogaster 61 CG31125 FBgn0051125 FBtr0084665 2 1 1 60 3R 20479818 20479836 GGATGGATTTCTGACACCC 57 20479776 20479797 TAAATAGGAGTGGTGATGAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 2 1 1 114 3R 20355899 20355981 AGAAATCTAATCCTAATGCGGC 58 20355806 20355824 ATCCATCCACGCAGATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 2 2 2 64 3R 20199729 20199813 AAGTGGGACTATGCCTACTC 58 20199684 20199702 ATGTGATGTTTGGGTGGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5720 FBgn0028471 FBtr0084633 2 1 1 80 3R 20141035 20141053 GCATAGACTGCAACTACGC 59 20140912 20140991 CGTGAGAGGATAGTGGTGG 59 NA Drosophila melanogaster 61 CG5463 FBgn0039153 FBtr0084584 1 1 1 80 3R 19954272 19954290 GATAAATCTCCAGGCAGCA 57 19954151 19954229 AGTTCGATTAGCTCACTGAC 57 NA Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 3 1 1 88 3R 19758875 19758893 CACCAAGGTCTATAGCGGG 59 19758735 19758824 GAAGAGCCTTGCGAATACAG 59 NA DesignNoJunction Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 2 2 2 80 3R 19723176 19723195 CACAACTACCTGTAGTCCAC 57 19723055 19723136 GATACACATTGTACCATATCGC 57 NA Drosophila melanogaster 61 CG16710 FBgn0039101 FBtr0084438 3 1 1 80 3R 19508237 19508260 CAAAGAGTGTACATATCCTTCCTG 59 19508296 19508508 ATTACAAGGCGGATATTCAGAC 58 NA Drosophila melanogaster 61 fzo FBgn0011596 FBtr0084399 1 1 1 60 3R 19029620 19029640 CGTTTATATCCTCATCGTCGT 57 19029580 19029598 AGTTCTGTCTTTGCGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13838 FBgn0039041 FBtr0084344 2 1 1 86 3R 18868190 18868208 TTGGATGACCTAAACACCG 57 18868258 18868276 TTCCGAGCTGATTAGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nha2 FBgn0051052 FBtr0084367 3 1 1 94 3R 18811936 18812047 GTAATATTCTCAACGACTTCGC 57 18811863 18811881 ATCGAGCCGTAGAGATAGC 58 NA Drosophila melanogaster 61 CG5278 FBgn0038986 FBtr0084281 3 1 1 98 3R 18385398 18385421 ATCATGTACTCCTACTACTTCCTC 58 18384982 18385341 GAACTGGATCATCTGCAGG 58 NA Drosophila melanogaster 61 CG12499 FBgn0038968 FBtr0084295 2 1 1 98 3R 18271798 18271870 TTCATAACAGAACTGCGACAC 59 18271720 18271738 TAACTCCAAGGGCTTTCCA 58 NA Drosophila melanogaster 61 CG7084 FBgn0038938 FBtr0084201,FBtr0301190 3 2 2 89 3R 18128384 18128492 CTATATGGGCGATACGTACG 57 18128543 18128562 GAATACACAATGATGGGCAG 57 NA Drosophila melanogaster 61 Cchl FBgn0038925 FBtr0084185 2 1 1 135 3R 17852198 17852216 AAGGCCAAGGACTTCAGTC 59 17852024 17852042 GTCCACCGTCGTAGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874,FBtr0084169 3 2 2 114 3R 17821398 17821416 AGATCAGCCAGAGCAATCC 59 17821491 17821578 TGTGATGTTTGGTTGTTCTCAG 59 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 2 2 2 87 3R 17566287 17566306 TCTACACGGCTATTATGGCA 58 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 DNApol-alpha180 FBgn0259113 FBtr0084115 3 1 1 80 3R 17495951 17496037 CCCGACAATTTCTCTTAGATCC 58 17495892 17495913 CGAACTCCTTGTATATGTCTGC 59 NA Drosophila melanogaster 61 AP-2sigma FBgn0043012 FBtr0084103 3 1 1 112 3R 17095402 17095480 CCAACTTTGTGGAGTTCCG 59 17095308 17095326 AATGGCCTCCAGATAGCAC 59 NA Drosophila melanogaster 61 CG5810 FBgn0038866 FBtr0084026 1 1 1 60 3R 16990039 16990058 GCACATCTTCTCACAACTGG 59 16990079 16990099 CACTAGCTGATTACTGTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17278 FBgn0046763 FBtr0084047 1 1 1 229 3R 16847303 16848407 CAGTATTGTTGGCCATCGC 59 16846992 16847010 CTACGGACACTCCTTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Rlip FBgn0026056 FBtr0084002 1 1 1 94 3R 16843587 16843673 GAGAGCGACTTTAGTGAGGA 59 16843730 16843748 TATCCTCGATCCTTGCCCT 59 NA Drosophila melanogaster 61 CG31195 FBgn0051195 FBtr0302188 3 1 1 80 3R 16585616 16586177 TTCTGCAGGTATCGGATCC 59 16585554 16585573 CGATCATTTGATCCTCGGTC 58 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0083828,FBtr0273258,FBtr0273259,FBtr0083827 3 5 5 92 3R 15842657 15842675 GATGAAGCACTTACGCTGC 59 15842730 15842810 AATGAGGACGTCAAAGTCCT 59 NA Drosophila melanogaster 61 CG11447 FBgn0038737 FBtr0083815 1 1 1 60 3R 15687506 15687524 GATCCGTACGTGGAGAAGG 59 15687547 15687566 GTAATTTGAAGGCACTCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 2 3 3 88 3R 15480771 15480789 GAATGTCTTCTCGCTGCAC 59 15480636 15480724 CGTAAATCATTCCCAATCTACCAG 59 NA Drosophila melanogaster 61 CG18493 FBgn0038701 FBtr0083756 3 1 1 89 3R 15216223 15216372 ACCTATCAGATGCGTTATTTGC 59 15216422 15216440 CTCAATCTCCCATTCGCCA 59 NA Drosophila melanogaster 61 Prp18 FBgn0027784 FBtr0083717 3 1 1 60 3R 14856414 14856433 GGAGAGCATACAGACAATGG 58 14856373 14856391 CACATCCATGTCGTAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14285 FBgn0038674 FBtr0083711 2 1 1 66 3R 14850951 14851027 AAATACGAATCTGGTCACCG 58 14851055 14851074 TATATGTACGCCTCGTGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6005 FBgn0038672 FBtr0083719 3 1 1 84 3R 14849156 14849237 AGGATTGGTTCTACTTTCCGT 59 14849092 14849110 GTATCCTGCCATTGCTTGG 59 NA Drosophila melanogaster 61 snRNP-U1 FBgn0038667 FBtr0083720 1 1 1 60 3R 14808941 14808959 ATGCCTCCACTGATGAACC 59 14808899 14808919 CCATGGGATTCATAATCGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cona FBgn0038612 FBtr0083624 2 1 1 88 3R 14212029 14212047 ATGACCATTGCAAGAAGGC 58 14212099 14212189 GTGGTAGTTCATCACGGTG 58 NA Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 3 2 2 125 3R 14100747 14100765 GAGGACCAACAGGAGTACG 59 14100854 14107424 AATCCACACCTTCTTGCGA 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 2 2 7 260 3R 14000712 14000730 CTATTCTACACGCCACCCA 59 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 Prx5 FBgn0038570 FBtr0100620,FBtr0100619 1 2 2 91 3R 13991871 13992084 TGGTGAAAGTAGGAGACTCC 58 13991799 13991817 CTTGCCATTGACGAGATCG 59 NA Nonspecific Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0100377,FBtr0300242,FBtr0083535,FBtr0083537 3 6 7 80 3R 13793538 13832662 CAATGAGGAAGAGGTTCGC 58 13832703 13832724 CTGAATAACAAATAGAGCTCGC 57 NA Nonspecific Drosophila melanogaster 61 CG12347 FBgn0038558 FBtr0083519 3 1 1 60 3R 13732281 13732301 GGCATACAGTTTGAACTGGAG 59 13732323 13732341 CTCCTCCTTCACTGTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7431 FBgn0038542 FBtr0083532 3 1 1 133 3R 13578769 13579792 CACAACAAGAAATTCAAGCGC 59 13578656 13578674 TTGGCTATCGTCTGGTTGG 59 NA Drosophila melanogaster 61 CG7431 FBgn0038542 FBtr0083532 2 1 1 128 3R 13578769 13579792 CACAACAAGAAATTCAAGCGC 59 13578661 13578680 TATCGTCTGGTTGGAGAACG 59 NA Drosophila melanogaster 61 CG34281 FBgn0085310 FBtr0112477 2 1 1 60 3R 13438896 13438915 ATACGGAGGATTTGGTGGAG 59 13438936 13438956 GCTAAACTGGTTGTATTGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 1 5 5 85 3R 12920386 12920404 CTCGGTGAAGTACGATCCC 59 12920256 12920337 TGAAGGGAGATCCTTGCAC 59 NA Drosophila melanogaster 61 CG3590 FBgn0038467 FBtr0083373 2 1 1 60 3R 12846398 12846416 ATCCATTTGGGAGCAACCT 59 12846356 12846376 CCCTCAGTACAATCAGATCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8907 FBgn0038466 FBtr0083372 2 1 1 89 3R 12835490 12835508 ATCTCACTGGGCAATACCG 59 12835615 12835697 CTTGCTTAGCGTCTTTAGATCC 59 NA Drosophila melanogaster 61 nonA-l FBgn0015520 FBtr0083335 2 1 1 60 3R 12466419 12466440 GCAAAGAACAATGAACTCTCAG 58 12466460 12466479 TGTTACTATGGTTCGGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pad FBgn0038418 FBtr0301514 1 1 1 89 3R 12170579 12170658 CATAGGCGAATTCACACGC 59 12170711 12170729 CTCGTAGTGCAACTTGGTG 58 NA Drosophila melanogaster 61 CG5903 FBgn0038400 FBtr0083281 3 1 1 232 3R 11972262 11972280 CAACGATGGGAATCATGGC 59 11971985 11972003 ATATCCAGACTGCACCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Rbf2 FBgn0038390 FBtr0083213 1 1 1 60 3R 11792183 11792201 CTAGTTGGAGACGACACCC 59 11792221 11792243 GATTGATATCTAGCATACCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14854 FBgn0038238 FBtr0113233 2 1 1 80 3R 10385349 10385433 AACCAGTTGGTTTGTATGGG 58 10385288 10385309 TATTGTCCATGTACTGGAACAC 58 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630,FBtr0112631 1 3 3 80 3R 10221736 10225448 GTACGAAGATCATCAGTTCCC 58 10221676 10221695 GACTGCAACTGATCGTTCTC 59 NA Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 3 2 2 99 3R 10156792 10166951 AAACGCAGGTAAAGATCTGG 58 10156712 10156730 GCATTCGAGGATTTGTGCT 58 NA Drosophila melanogaster 61 spn-B FBgn0003480 FBtr0082933 1 1 1 80 3R 10154145 10154163 TCCGGATGATGTTAGGGTG 58 10154207 10154286 TTGAAGAGGGAATCCGCTG 59 NA Drosophila melanogaster 61 CG9918 FBgn0038201 FBtr0100131 1 1 1 84 3R 9926576 9926595 GGCACTAACCAATTCCAGTC 59 9926422 9926530 CGTCGGATTCTGCATTATCG 59 NA Drosophila melanogaster 61 Art9 FBgn0038188 FBtr0082879 3 1 1 82 3R 9768941 9769015 AGGATAAGATAGTCCTGGACG 58 9768879 9768897 CATAACTTTGACGGCACCC 59 NA Drosophila melanogaster 61 Act87E FBgn0000046 FBtr0082785 2 1 2 280 3R 9251711 9251730 GCAGTTCTACAGCGAAAGTG 59 9252513 9252531 TTCAGGGTGAGGATACCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8773 FBgn0038135 FBtr0290037 3 1 1 80 3R 9123170 9123247 AGGATCATTTGGATAACCGC 58 9123289 9123308 CTTCAGTGAGACAGGATTCC 57 NA Drosophila melanogaster 61 CG11598 FBgn0038067 FBtr0110781 3 1 1 83 3R 8460686 8460761 CAAGGGACTAATTACATCCGA 57 8460805 8460824 AAATACCCATCTCGTGTGAG 57 NA Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041,FBtr0301042 1 2 2 81 3R 7717008 7717030 CGACTACCAGCTTATTAATGTCG 59 7717067 7717153 AGCAAGATTCTGGTAGAAGTAGG 59 NA Drosophila melanogaster 61 CG14717 FBgn0037938 FBtr0082425 3 1 1 60 3R 7522569 7522587 CTCAGTCAGGTTGGATTGC 58 7522611 7522629 GACTAAGGCCATGATTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18765 FBgn0042110 FBtr0113346 2 1 1 114 3R 7517414 7517433 AGCAGATATCAGAGTTCCGA 58 7517261 7517337 CGTTTCTTGTTGTCTGCCA 59 NA Drosophila melanogaster 61 CG31389 FBgn0051389 FBtr0082419 2 1 1 68 3R 7467518 7467536 AATTACACGGTTAGCTGCC 58 7467568 7467586 TCTTCTGGTGCACAAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100465,FBtr0100462,FBtr0100461,FBtr0100464 3 4 4 85 3R 7386578 7386596 AGCATTCCTAAGTCAGCGG 59 7386452 7386470 GAGTTGCTCAGTTGTCCTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 KP78a FBgn0026064 FBtr0301426 1 1 1 82 3R 7176867 7178735 CAAGGCAGCTGTTACTCCT 59 7176803 7176821 TGTTCTTGTTTGCGACTGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG6689 FBgn0037877 FBtr0082368 1 1 1 80 3R 7043878 7043897 TGAAGGGATTCTATCAGCGG 59 7043748 7043836 AAACCTCGCACCAATATGGA 59 NA Drosophila melanogaster 61 CG12818 FBgn0037809 FBtr0082230 3 1 1 161 3R 6157511 6157587 GAATTTGCTGAAAGCGAGG 57 6157711 6157730 GTTAGTGGTCTTCACTCTCG 57 NA Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 3 2 2 118 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597846 5597924 TTCTGATCCACTTTCTTCAGC 58 NA Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0081943 1 1 2 140 3R 4593507 4593851 GTTCCAAGTGAATGAATGGG 57 4593386 4593404 TTTCGCTTACGATTAGGGC 58 NA InUTR Drosophila melanogaster 61 CG9793 FBgn0037620 FBtr0081948 1 1 1 84 3R 4555195 4555272 TGGAGCTGTGTTAAAGAACTG 58 4555131 4555150 AAAGGATATGGCTTGTTGCA 58 NA Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 1 2 2 155 3R 4174326 4174345 CAGCAAGTCCTAGAAATCGA 57 4174517 4174535 ATCCAACTCCTGTCTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7910 FBgn0037547 FBtr0081790 3 1 1 86 3R 3914739 3914757 GATTCAACGGCCTTATGGC 59 3914805 3914880 CAAGCAATTGATTCAGATGGC 58 NA Drosophila melanogaster 61 ImpE3 FBgn0001255 FBtr0081819 3 1 1 60 3R 3854487 3854506 TCCTGCTGGTTTACGATCTG 59 3854446 3854464 TCGTACTTGCTCAGACTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10435 FBgn0037539 FBtr0081820 1 1 1 80 3R 3837064 3837084 GTACTATGGGTTTCCCTCTGG 59 3836944 3837028 GGTGTTCGATAATCTTCTTATCGTC 59 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301217 2 1 2 105 3R 3826729 3826818 GAACAATTTGGTCCGTGCT 59 3826584 3826660 ATATCGCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 CD98hc FBgn0037533 FBtr0081824 3 1 1 80 3R 3800907 3800925 AGACTGCATCCTACATGCA 58 3800574 3800864 TTCCAGACTTGATCCTGGAG 58 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551,FBtr0081550 3 2 2 82 3R 3346281 3346299 CCTGGAGTAACTCCATCCC 58 3346155 3346236 CGGCATAAGCTTTACCTCTG 58 NA Drosophila melanogaster 61 CG14598 FBgn0037503 FBtr0081534 2 1 1 223 3R 3265583 3266589 CTTACTCATTGCTTGTGCAG 57 3266772 3266793 GGTAGTACGATTTCTTGGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081590 2 1 2 60 3R 3187392 3187416 CCACCTATAATAATGAGGTAGACGA 59 3187356 3187378 GTGAACAATCTACTTTCGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31496 FBgn0051496 FBtr0081582 1 1 1 113 3R 3170922 3170940 CGGCCTAAGTCTTATGCCA 59 3171273 3171291 ACAACGTTGCCAATGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 2 2 2 94 3R 3077084 3077103 CACCACTTCAGCTCCTAGAG 59 3076954 3077027 AGACATTGGTCATCGACGT 59 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081619 2 1 3 82 3R 2589230 2589566 AACAGAAATACCAGACATGGC 58 2589610 2589628 TAAGCACCGAATCCAAGCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 3 4 4 80 3R 2536672 2537235 TCCGATAGTAACTCCAATTCGA 58 2536613 2536631 ATTTGACGTGGAATCGGGT 59 NA Drosophila melanogaster 61 Ccp84Af FBgn0004778 FBtr0081695 2 1 1 238 3R 2515829 2515905 GCCTTCAAGTTCTTCGCTG 59 2515609 2515628 TCAACCTGACTCTTCGAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 Ccp84Ag FBgn0004777 FBtr0081689 1 1 1 133 3R 2512473 2512491 TAGAGCAACCCAAACAACC 58 2512803 2512821 ATCGTACTCCTCAACCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31562 FBgn0051562 FBtr0078589 3 1 1 83 3R 2010549 2010568 CATGATCCTCGAGGATCTGG 59 2010748 2010766 GGCTTGGTCTTAACAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG2104 FBgn0037365 FBtr0078726 1 1 1 60 3R 1518349 1518369 TAACCTATTCCGTGAACTCGT 59 1518309 1518328 AACTGAAACTTATCCAGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED27 FBgn0037359 FBtr0078712 2 1 1 80 3R 1481355 1481373 CGCTCCTACAATTACTGCT 57 1481414 1481495 CTTATCTATGTGGTCTGGATCG 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 2 7 7 80 3R 1424707 1424726 CACAAGCTACTGCATCTTCG 59 1424045 1424668 CTGATGAGCTTGACAAATACCTG 59 NA Drosophila melanogaster 61 CG14671 FBgn0037340 FBtr0078754 3 1 1 95 3R 1390055 1390138 CATTGGTTCTCGGTACTGC 58 1389978 1389996 CTGCAGATTAGTGCTCTCG 58 NA Drosophila melanogaster 61 Snr1 FBgn0011715 FBtr0078682 3 1 1 98 3R 1296985 1297003 TTAGCCAGCTCTGTATCGC 59 1297559 1297577 ATCGGAAGTGTTCACGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0100433 2 1 2 97 3R 1201560 1201581 CCAGGTTCATTTAATTAACCGC 58 1201639 1201719 TCTTATGGGCTTTGTCGTG 57 NA Drosophila melanogaster 61 dpr16 FBgn0037295 FBtr0110950,FBtr0078772 3 2 2 107 3R 992799 992887 CAATCGGAACACGATTGGT 58 992958 992976 TGCAACTGCATAGAAGCTG 58 NA Drosophila melanogaster 61 rpk FBgn0022981 FBtr0078859 2 1 1 110 3R 473035 473130 GATTTAAGGTACTGCTTCATGC 57 473201 473219 TGATCATGTTGGGCTTCAC 58 NA Drosophila melanogaster 61 CG32945 FBgn0052945 FBtr0078896 1 1 1 60 3R 404223 404247 GGATGTGGTAGATAGAATAAAGCAG 59 404187 404206 GGTGGTAGATCCGAGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 3 4 4 90 3R 293416 293435 TTTCTACTACATGATCGCCG 57 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CR33283 FBgn0053283 FBtr0302444 3 1 1 107 3L 20972282 20972300 AGTTCTCCTCGATTTGGCA 59 20972371 20972474 TTGGACCACTTCTCTTCCG 59 NA Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 1 2 3 110 3L 24530715 24535529 TTACCTGCTGAAGACATTTGG 58 24535599 24535619 CCCTTTGTTAAGATCCTTTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG40470 FBgn0058470 FBtr0111152 2 1 1 80 3L 23867020 23867106 AAACTTTGAAACTCCGGTCC 58 23866959 23866977 AGCCCAAACATCCATTCCT 59 NA Drosophila melanogaster 61 CG7133 FBgn0037150 FBtr0078485 1 1 1 60 3L 22067363 22067383 CACCGACAGTGAGATTAAGGA 59 22067323 22067343 TTTGTCGGGATGATATTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7148 FBgn0046301 FBtr0078448 1 1 1 96 3L 21823958 21823976 TTCAAGCAGAAGACGGGAG 59 21823823 21823901 TCTTTAGGTTCGCTCTATCCAC 59 NA Drosophila melanogaster 61 CG14566 FBgn0037127 FBtr0078453 3 1 1 255 3L 21733181 21733199 CTATCCCTCGGCAGATGAG 59 21732944 21732962 CACGGGCTTAGCTACTCTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 1 3 3 80 3L 21562488 21562506 GATCGTGCCTTAAGTTCCA 57 21562550 21562636 GATCTCGCTGTAGGATACG 57 NA Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078383 1 1 2 84 3L 21526717 21526735 AAACTGTGAGTGCTGTGGA 59 21526271 21526669 GTCTGGACCTGATGACCTG 59 NA InUTR Drosophila melanogaster 61 ko FBgn0020294 FBtr0078324 3 1 1 124 3L 21072049 21072162 CATCTTCACACCAGAACGC 59 21071943 21071961 GAACCACATCATCACCGTG 58 NA Drosophila melanogaster 61 CG12984 FBgn0037042 FBtr0078286 1 1 1 80 3L 20985190 20985208 GCTTCTGAAGATGCTGCAG 59 20985252 20985704 TCCAATTCGTTCACGACCA 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 1 4 4 82 3L 20959607 20959683 TATTGATGATGCCGTCGAG 57 20959543 20959563 CACAAGCCAAGTAACTATTCC 57 NA Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113183 1 1 2 121 3L 20709988 20710006 CAACCACGTGGTAAATGGC 59 20708770 20709903 ATATGCGGCAACATTTGCA 59 NA Drosophila melanogaster 61 CG17637 FBgn0037004 FBtr0078207 3 1 1 60 3L 20498651 20498675 GAGACTGATCTTAAGGTCAATTCTC 59 20498692 20498711 CACTGATGGCACTTATGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074901,FBtr0074900 3 2 2 72 3L 19988549 19988567 GATGTCGATGGCAATGGTG 59 19988600 19988747 CTAGCATGTCATAAATTGCCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14182 FBgn0036922 FBtr0074913 2 1 1 61 3L 19972764 19972782 CTGGATCATCACGGAGTCC 59 19972653 19972671 TCATGCAGGTCCACATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42263 FBgn0259148 FBtr0302430 2 1 1 80 3L 19948285 19948359 TTAGTGACGTTGGGAATCGA 59 19948224 19948242 GAATTCATCTGGATGCGCT 58 NA Drosophila melanogaster 61 Grasp65 FBgn0036919 FBtr0074895 2 1 1 73 3L 19918206 19918660 GGCTACCACGTACTCAAGG 59 19918696 19918715 ATGAAGTCGAAGAAGGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Gbeta76C FBgn0004623 FBtr0074949 3 1 1 130 3L 19681902 19681926 AGATATGAAGACCTATATCACTGGC 59 19682014 19682171 CACTGGGATGGTAGCAGAC 59 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586 1 1 4 80 3L 19178804 19192579 TACATCTGATCCAGCCTGAC 59 19153761 19153780 TTCTGGTTCATTCGATTCCG 58 NA InUTR Drosophila melanogaster 61 Ir75d FBgn0036829 FBtr0075073 2 1 1 60 3L 18903104 18903122 TCATCGCTTAATGCTGGAG 57 18902966 18903083 TGTTTGGTAGGTATTGTAGCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0075063 2 1 2 68 3L 18862716 18862734 CTACTGTCCCTACTGCACG 59 18862826 18862844 TCTATTATGGTGGCGTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG34253 FBgn0085282 FBtr0112447 2 1 1 118 3L 18080050 18080232 CGCACCATTGAATCCATCTC 59 18079951 18079970 TAATCCGGTAATTCTCGGCA 59 NA Drosophila melanogaster 61 Prestin FBgn0036770 FBtr0075153 1 1 1 81 3L 17894111 17894129 ACTCTAAATGCGGATCCCA 58 17893992 17894070 CCATTAGGAGGTTTACAATTCCC 59 NA Drosophila melanogaster 61 NUCB1 FBgn0052190 FBtr0075171 3 1 1 90 3L 17795021 17795039 CCTGAGTTCCGTAAGAAGC 58 17792610 17792628 CATGGTGGTTCACGTAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 3 2 4 163 3L 17558812 17567900 GCGATATTACACCGAAATTCCT 59 17558670 17558689 TTTGCTCCGTCTTTATGTGG 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 2 7 7 81 3L 17537428 17537446 AGTTCGGTAACGAAGACCG 59 17537490 17537572 GGCCTCCATAATCTAAGCCA 59 NA Drosophila melanogaster 61 Edc3 FBgn0036735 FBtr0075208 3 1 1 80 3L 17522055 17522073 GCGCTAAGCGATAAGATGC 59 17521705 17522014 GGATGTTTGTGGTGTTCTAAGG 59 NA Drosophila melanogaster 61 CG18265 FBgn0036725 FBtr0075219 3 1 1 109 3L 17433002 17442503 GCCGGAGACATTTAATATCATCC 59 17442572 17442590 TGTCGATGAGTTGGAGACG 59 NA InUTR Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 3 2 2 117 3L 17233851 17233869 GATATGATGGGTGGAGGCC 59 17233698 17233770 CGGCAACATCCTTGAAACC 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113427,FBtr0075285 1 2 4 97 3L 17160139 17160157 TAAGGTACTCACCCAAGGC 58 17122059 17158018 TTCTCGTCACCATCTTGGG 59 NA Drosophila melanogaster 61 PGRP-SB1 FBgn0043578 FBtr0075348 1 1 1 85 3L 16720952 16721038 TGCTGCTTAGCTCTATCCG 59 16720885 16720903 ATCCTAGAAGGCGATCGAG 58 NA Drosophila melanogaster 61 dbo FBgn0040230 FBtr0075505 2 1 1 82 3L 15822970 15823128 GATCCCAGACACAACAAATGG 59 15823169 15823190 TAGTTATTGAACACAGCACAGC 59 NA Drosophila melanogaster 61 CG12301 FBgn0036514 FBtr0075564 2 1 1 64 3L 15574372 15574390 AACAGAGATCTGCGGAGAC 59 15574475 15574495 CGCAGTATTTACGTAAACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7427 FBgn0036510 FBtr0075561 2 1 1 170 3L 15556819 15557370 GCAGTGCAATGAACAAACTG 58 15557503 15557521 CCCGGTAATAGTACTCCGG 58 NA InUTR Drosophila melanogaster 61 FucTA FBgn0036485 FBtr0075641 2 1 1 80 3L 15145216 15145234 TCTGGAGTGTCCGTATCAC 58 15145276 15145481 GTACTATCCCGTCTGTAGGTG 59 NA Drosophila melanogaster 61 CG13477 FBgn0036438 FBtr0075685 1 1 1 60 3L 14684691 14684712 CTGAACCGAATCATTAATCGCA 59 14684733 14684751 TCCTCTTCATCTGGACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5048 FBgn0036437 FBtr0075684 3 1 1 87 3L 14678054 14678073 ATCCCAATCAGAGAAGAGGC 59 14678119 14678193 GTTCCAGGGTTCATCTTATTGAC 59 NA Drosophila melanogaster 61 Mpcp FBgn0026409 FBtr0075718,FBtr0075719 3 2 2 103 3L 14532076 14532094 TCTACAAGGGTCTGGTTCC 58 14532160 14532662 CACCACATACTTGTAGAGCA 57 NA Drosophila melanogaster 61 CG34244 FBgn0085273 FBtr0112438 3 1 1 104 3L 14228642 14228720 TCCTTCTGGCTTACATCGC 59 14228556 14228574 TCACATCCGCATAAACCCT 59 NA Drosophila melanogaster 61 CG7924 FBgn0036416 FBtr0075740 2 1 1 81 3L 14226599 14226617 CAATATCACTTGGCCGCAG 59 14226724 14226742 TAATCCGACCGATTTCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075737 1 1 2 80 3L 14211376 14211449 CCACCAAGTTATCCGATCTG 58 14211492 14211510 TATCGAAGTAAACGCGTGG 58 NA InUTR Drosophila melanogaster 61 Sfp70A4 FBgn0259970 FBtr0300316 1 1 1 60 3L 13289930 13289952 AGTTACTGAACCTACTACTGGTC 59 13289892 13289910 CTTCTTCGAGCCTCAACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34428 FBgn0085457 FBtr0112729 3 1 1 83 3L 13055552 13055625 ATTACTCACACCCTCCTCC 58 13055672 13055690 GATTGTCCCATCTTCTCCG 57 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 1 2 2 123 3L 12776773 12776845 CTCTGCCAATTTGCCTGAG 59 12776932 12776950 GCAGCAGGTATTTACTGGA 57 NA DesignNoJunction Drosophila melanogaster 61 eIF-2beta FBgn0004926 FBtr0075968 3 1 1 114 3L 12518771 12519098 GACAAAGAGAACGACGAGGA 59 12518676 12518694 TGTCCGGATTCTTGTCGAG 59 NA Drosophila melanogaster 61 GRHRII FBgn0036278 FBtr0075989 3 1 1 82 3L 12340342 12340360 GGCCAAGAGGTGTCATAGG 59 12335696 12340299 CATGGAAGATGAAGAACTGTGG 59 NA Drosophila melanogaster 61 CG33268 FBgn0036177 FBtr0076145 2 1 1 73 3L 11584171 11584189 CTACCACGACAACTTCGTC 58 11584116 11584134 GTGCTCCTTCTTGGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 1 3 3 80 3L 11064017 11064035 ACCGGTTACCTCAATCTGG 59 11064077 11064162 GAGTGGCGAATTCTTTCTCAG 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 1 4 4 80 3L 11030771 11030790 CTTTGGCTTCCTGAAGTACG 59 11030644 11030729 GATTGGGCCAACTTATCCTC 58 NA Drosophila melanogaster 61 CG3529 FBgn0035995 FBtr0076461 1 1 1 82 3L 9442913 9443129 GTGGTAAGTAAATCGACGAAAGAG 59 9443332 9443351 TCCTCAATTCCCTCGATGTG 59 NA Drosophila melanogaster 61 CG4022 FBgn0035986 FBtr0076486 1 1 1 98 3L 9402427 9402445 AAAGATCCTGAGGAGCGAC 59 9402276 9402367 GAGTATTACGGCGTTTCTGAC 59 NA Drosophila melanogaster 61 CG4461 FBgn0035982 FBtr0076452 3 1 1 60 3L 9369011 9369029 TGAGGAAGTACCTTCTGCC 58 9369050 9369071 CTGGATATGTCCGAGATTACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dally FBgn0011577 FBtr0076583 2 1 1 83 3L 8870393 8879384 AGTTCCAAAGTCACGTCCT 58 8879429 8879449 CCATACGGGTATAAACCTTCG 58 NA Drosophila melanogaster 61 CG32353 FBgn0052353 FBtr0076631 2 1 1 60 3L 8583964 8583982 ACAGTTTCGAAGTGGTGAG 57 8584005 8584024 TCCATGAAGCTAAGGTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rhea FBgn0260442 FBtr0076627 2 1 1 81 3L 8564751 8565127 CCGATGTCAAGATTGAACTCG 59 8565170 8565188 GATGCTCCCATTATGCCCT 59 NA Drosophila melanogaster 61 CG7081 FBgn0035876 FBtr0076602 3 1 1 87 3L 8332279 8332366 CGTGTAAATCAGATAGATGCCA 58 8332414 8332432 AGATGGCTTGCAAGTTCTC 58 NA Drosophila melanogaster 61 CG13671 FBgn0035867 FBtr0076706 1 1 1 60 3L 8295216 8295235 CTGGGATATCTATGAACGGG 57 8295256 8295276 GTTGTTGAACTCCCTTAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nmt FBgn0020392 FBtr0076728 2 1 1 135 3L 8171311 8171330 TTGCCGGCTTAAATATCCAG 58 8170712 8170730 GAAACGGCTTGTAGCAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 2 2 2 98 3L 8126880 8126958 TTACCAGAGTCAATAGCAAACC 58 8126803 8126821 TAAGCTCCAACAGATTGGC 57 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302548 3 1 5 83 3L 7359198 7359269 AACTACAGACGCTGAAGGT 58 7359133 7359154 TCTTTGGTACTCTCAACCTCTG 59 NA Drosophila melanogaster 61 MED4 FBgn0035754 FBtr0076889 3 1 1 269 3L 7243417 7243435 AATTGGTGGACCTGTTGGA 59 7243108 7243126 ATTTGATGAGCTCCTCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14911 FBgn0035701 FBtr0076966 3 1 1 129 3L 6477543 6477561 ATGGACGATGCCTACAGTC 59 6477651 6477794 AATTGTATTTCTCGCCACACTG 59 NA Drosophila melanogaster 61 Lcp65Aa FBgn0020645 FBtr0076995 2 1 1 95 3L 6144436 6144454 AAATCCATCCTTGTGCTCG 58 6144513 6144531 ATTGACATCGGACACCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42269 FBgn0259164 FBtr0299610 3 1 2 80 3L 6062984 6063333 ACATATTGGTTCTCGAGTACGT 59 6063372 6063392 CTCCAGTGAAGAAGATAGCGA 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077099,FBtr0077100 2 2 6 134 3L 5763026 5764728 TGGACATGACAATAACGGC 58 5764826 5764844 GGATAGAGGACCCTCTTCG 58 NA Drosophila melanogaster 61 DnaJ-1 FBgn0015657 FBtr0077123 3 1 2 123 3L 5744694 5744960 TCGCTTACATTTAAGCTGAGAG 58 5744592 5744611 GTCGGGATGGTATTTGAGTG 58 NA InUTR Drosophila melanogaster 61 sinu FBgn0010894 FBtr0077136 3 1 2 73 3L 5553867 5553887 GAATCTCAGACGCGATTTGAG 59 5553750 5553768 TTTCCTTGGTGCAAGTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sinu FBgn0010894 FBtr0077136 2 1 2 72 3L 5553867 5553886 AATCTCAGACGCGATTTGAG 58 5553750 5553768 TTTCCTTGGTGCAAGTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599,FBtr0077172,FBtr0077175,FBtr0077173,FBtr0077174 1 5 5 80 3L 5156243 5156458 AGGTAGATGATCAGACTTCGT 58 5156183 5156203 GTTTGTATGAGGTTACTCCCA 57 NA Drosophila melanogaster 61 CG4623 FBgn0035587 FBtr0077167 2 1 1 131 3L 5136352 5136428 CAAATTTCGCGGTGATCGA 59 5136523 5136541 TCGTCGTGTATGAAGGAGC 59 NA Drosophila melanogaster 61 CG13711 FBgn0035572 FBtr0073347 2 1 1 60 3L 4758151 4758169 TCACCTGTATCTGTACCGC 58 4758193 4758211 GGACAACCTCATGTACTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 1 2 4 154 3L 4290905 4290923 CTTTGGTCAAATCCTGCCG 59 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 Faa FBgn0016013 FBtr0073278 3 1 1 68 3L 4073082 4073160 GAAGGCGGTTTCCATTGTG 59 4073032 4073052 GTATAGTCACCAATCTGTGCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG11593 FBgn0035488 FBtr0114509 2 1 1 80 3L 4038859 4038882 CTATGTGCTAATCTATCTGCATGG 59 4038741 4038822 AGCTGATAACACCGTTTAAGC 59 NA Drosophila melanogaster 61 CG32284 FBgn0052284 FBtr0073037 1 1 1 93 3L 3186885 3186968 TCCAACTTGTAGAACCTACGT 58 3187021 3187041 GGGATCAAAGTACTGGTTCAC 58 NA Drosophila melanogaster 61 rasp FBgn0024194 FBtr0073029 1 1 1 60 3L 3162307 3162326 CGGGATCACATAGTCAAGGA 59 3162348 3162367 AAGGATACAAACTCCAGCCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 3 3 3 80 3L 3150146 3150226 ACTTTCAGGCTTTGTTCACC 59 3150267 3150287 TCTTTAGGTCATCGTACTGCA 59 NA Drosophila melanogaster 61 Spn FBgn0010905 FBtr0072961 1 1 1 86 3L 2512850 2512870 GCAGGCTTAGAGAAACTAGGA 59 2512723 2512802 ATCGTTGACCTGAATGCGA 59 NA Drosophila melanogaster 61 ecd FBgn0000543 FBtr0072903 1 1 1 88 3L 2265516 2265534 TGAACGAGGAGACAAACCC 59 2265373 2265391 GATGTTGTCGCCATAGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42356 FBgn0259702 FBtr0299955 2 1 1 102 3L 2022471 2022490 ATAGAACATTGCCACAGGCT 59 2022336 2022409 GCACAGTTATTTGAGAACAGCA 59 NA Drosophila melanogaster 61 Mfap1 FBgn0035294 FBtr0072841 2 1 1 131 3L 1942228 1942308 AACGTGATAACGTCGAACG 58 1942403 1942421 ACTTGTACTTGCCCTTGGT 59 NA Drosophila melanogaster 61 CG2021 FBgn0035271 FBtr0072791 3 1 1 60 3L 1777281 1777299 CAGTCTCCATCATTACGGC 58 1777239 1777257 TGGTCGAATCCCTTGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13932 FBgn0035259 FBtr0072801 2 1 1 77 3L 1710141 1710159 CACAGTCACCAGTCAAAGC 59 1710082 1710100 AGTCTGTAGTCTGGAGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33230 FBgn0053230 FBtr0072757 2 1 1 134 3L 1618609 1618858 GCAAGAGTGCAAGCATAGAG 59 1618952 1618973 GAATTCTCGTCAGACTTCTTGG 59 NA InUTR Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 3 3 3 103 3L 1621163 1621182 CTTGTTCAAAGGAGCTGTGG 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705,FBtr0072704,FBtr0072703 3 3 3 80 3L 1533794 1533867 CAAATCCTACGATGCGGAC 58 1533732 1533752 GCGTAAATTTCTACCACATCG 57 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 2 2 2 140 3L 1312657 1312734 CAGTTTGGGTGATAGGGCA 59 1312535 1312554 CGTATTTCTCGATGAAGGCG 59 NA Drosophila melanogaster 61 mwh FBgn0260963 FBtr0072632 2 1 1 80 3L 1230143 1230161 AGTTTGGCTCCATTACGGA 59 1230204 1230276 CAAACTCCTGAACGAAGCTG 59 NA Drosophila melanogaster 61 LysE FBgn0004428 FBtr0072630 3 1 1 191 3L 1212950 1212968 AAATGAAGGCCTTCATCGT 57 1213123 1213141 TGTAGTTCTCAGGACCCAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 bab2 FBgn0025525 FBtr0072639 2 1 1 80 3L 1143394 1143413 GGACTATCGCGAGATTAAGG 57 1142905 1143352 CCTCCTCCGATATAGGTACC 58 NA Drosophila melanogaster 61 CG32334 FBgn0052334 FBtr0113434 3 1 1 205 3L 1112234 1112252 TTCTGATTCCGACGCTACC 59 1112047 1112065 GTTGTAGCCATCATTTGCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34056 FBgn0054056 FBtr0100833 3 1 1 87 3L 896473 896492 AAATGAGGAAGGCCCTAGAG 58 896539 896616 ATCACAAAGGTGTCATCATCTG 58 NA Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 2 2 2 160 3L 838473 838492 TAAACTTGATCTGCACCCAG 57 838614 839258 CTTGTTGAGCTCGATGAGAG 58 NA Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 1 2 2 159 3L 838474 838492 AAACTTGATCTGCACCCAG 58 838614 839258 CTTGTTGAGCTCGATGAGAG 58 NA Drosophila melanogaster 61 CG34269 FBgn0085298 FBtr0112464 2 1 1 60 3L 528494 528513 GTTCTCCAGAGCGATTACAC 58 528535 528554 CGCTTTGCAGACTTAAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299866,FBtr0072475 1 2 6 198 3L 171972 172073 TGTGTTGTGTAATCACACCAC 59 172233 172251 TAGGTCTCAAACTCGCTGC 59 NA InUTR Drosophila melanogaster 61 5SrRNA:CR33361 FBgn0053361 FBtr0086353 1 1 1 60 2R 15650774 15650792 ATACATCGGTTCTCGTCCG 59 15650732 15650750 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 gsb FBgn0001148 FBtr0072444 1 1 1 177 2R 20949718 20950767 CTTTCAAGGACAAGGTCGT 57 20950905 20950926 GAAGCGGTTTAGAATCTTTGAG 57 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 1 3 3 80 2R 20721182 20721203 CACCCTCACATTATCTACCTCC 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 CG3511 FBgn0035027 FBtr0072309 3 1 1 80 2R 20459785 20459806 CACATCAAATTCTGGAAGAAGG 57 20459845 20459922 TGATTTGATGGGTACTAGGTG 57 NA Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 2 2 2 80 2R 20447023 20447041 GAGGCCGAGAAGATACTGG 59 20446639 20446980 GAAATGCCAAGTGTCGACTG 59 NA Drosophila melanogaster 61 Ssl FBgn0015300 FBtr0072351 1 1 1 80 2R 20387168 20387189 ATATGTTCTTTATGCAGCTGCC 59 20387049 20387128 ACTGGAAGCCATAGATACGG 59 NA Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072367 1 1 2 96 2R 20269369 20270772 TGATTTAGGATGCACCTCGA 58 20269292 20269310 ATCCGACAGGAGAATGCTG 59 NA Drosophila melanogaster 61 nvy FBgn0005636 FBtr0072267 3 1 1 90 2R 20176862 20176973 CAGTGACACAGGTGAAACG 59 20177027 20177045 TCCTGCGTCATGATCTCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3735 FBgn0034933 FBtr0072210 3 1 1 80 2R 19826121 19826195 TGGCAGTCAAGATGATCAGG 59 19826060 19826081 ATCGTATTCCCGGAGTAATCTC 59 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100330,FBtr0100329 1 3 3 80 2R 19645443 19645522 ACCACTTCCTCAATGGAGAC 59 19645382 19645400 CTGGCAGAGATCTACCCAG 59 NA Drosophila melanogaster 61 CG5532 FBgn0034902 FBtr0072091 2 1 1 211 2R 19640407 19640425 ATCATGGGATACGCCAAGG 59 19640658 19640677 GATAGCATGCACACCATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302125 3 1 13 83 2R 19547150 19547168 AATCTTGGGCGTTCTTCTC 57 19547209 19547927 GACTCTAGACTAGAATTCAGAACTC 58 NA InUTR Drosophila melanogaster 61 Gr59f FBgn0041234 FBtr0072059 1 1 1 90 2R 19430076 19430148 CGAGGGAAAGACTATCTTCC 57 19430200 19430219 ACGGAGATGAGTAGTAACCA 57 NA Drosophila melanogaster 61 CG3906 FBgn0034871 FBtr0072121 3 1 1 118 2R 19399189 19399207 GAGGTGCACAACTATGTGG 58 19398998 19399107 TCGCGCTTGTTAATGTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13540 FBgn0034839 FBtr0072000 3 1 1 65 2R 19158160 19158178 GTTGAACCATGAGGTCGTC 58 19158207 19158225 TCATTCTTCCTCCGCTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3092 FBgn0034835 FBtr0071999 1 1 1 60 2R 19120872 19120891 ACGCCTTTATAGACATGCTG 58 19120914 19120932 GTGGCCGTATCAAAGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fib FBgn0003062 FBtr0071982 2 1 1 128 2R 18961158 18961558 ATCTCCGTTGAGACCAATGG 59 18961049 18961067 GTAGAGAACCTTCGAGCCC 59 NA Drosophila melanogaster 61 inaD FBgn0001263 FBtr0071909 2 1 1 81 2R 18744205 18744284 CAACTACGATGATGCTACTGG 58 18744144 18744162 CTCCTCGCTCTTGAGAGTC 59 NA Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 1 1 1 72 2R 18545711 18545729 TACTGACCACCGTGAAGTC 59 18545765 18546430 CAGATGAACAGGCACAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG3732 FBgn0034750 FBtr0071936 3 1 1 287 2R 18527350 18527445 CAGATTACGACTGTCGCCA 59 18527081 18527099 ACATATTGCAGGTTTGGCG 59 NA DesignRelaxed Drosophila melanogaster 61 dnr1 FBgn0260866 FBtr0071837 1 1 1 231 2R 18454187 18479839 GTCTGGAGAAGGTCTGTCG 59 18453974 18453992 AAATTACGCACGCTCTCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG6018 FBgn0034736 FBtr0071835 3 1 1 83 2R 18437695 18437716 CGTTGAGATTAGGAAGCAATGG 59 18437756 18437843 CACCTTATGGCCAATAATCTTGG 59 NA InUTR Drosophila melanogaster 61 rad50 FBgn0034728 FBtr0301668 3 1 1 106 2R 18311843 18311862 CAAAGAAGCTGAGGACTACG 58 18311931 18312006 TTTCGGCTTCCAATTTCCT 57 NA Drosophila melanogaster 61 CG11298 FBgn0034721 FBtr0071819 1 1 1 60 2R 18236139 18236157 CGACATGGACGAACATGTG 59 18236180 18236199 GAGGTTTCTCAGACGTTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776,FBtr0071775 1 2 2 80 2R 18168313 18168331 GGAGCGAGATTGTTCAGAC 58 18168373 18168506 TTATTAATGAGCCTCTGGCTG 57 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299557 3 1 5 88 2R 17956097 17956115 ATATGTGATTGCCGTGGAC 58 17956166 17956258 CAAGCACTGCAATTATCTCC 57 NA Drosophila melanogaster 61 CG42364 FBgn0259710 FBtr0302526 3 1 1 60 2R 17553883 17553902 CCTTGTACCACAGAGTTCAG 58 17553923 17553943 ACATTTCGCTGCTTATTCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 clt FBgn0000326 FBtr0071687 3 1 1 67 2R 17505885 17505966 AGTGACTTCCACTTTCCCG 59 17505836 17505855 AGTCGGTAATTCAGGGTGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9754 FBgn0034617 FBtr0071615 3 1 1 60 2R 17198337 17198355 GGTTACTGCGTCTACTGGG 59 17198295 17198315 TTAACTGTGCTCTGTAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 2 2 2 90 2R 17103409 17103489 TCTACTGTGATCAGCACCT 57 17103337 17103356 AGGATTTCCTCGGTAATCGA 58 NA Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 3 2 2 128 2R 16506813 16506831 CCAAGGGCACTTATCACCT 59 16506923 16506993 TGATGAACAATGAGCGGGA 59 NA Drosophila melanogaster 61 Ir56d FBgn0034458 FBtr0086497 1 1 1 60 2R 15400426 15400445 TGAAGGGCTATTTGGTAAGG 57 15400385 15400403 TCCGATTTAAAGACCCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir56c FBgn0034457 FBtr0086466 2 1 1 60 2R 15398086 15398105 GTTCAGTGGTGTCTAATGGT 57 15398125 15398146 GAAGTGGGTAGAAATAGGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oseg6 FBgn0034452 FBtr0086501 2 1 1 80 2R 15375302 15375321 AACTGGGCAATCATTTGCTG 59 15375187 15375263 GAATGATATGTTCGGGAAACTGG 59 NA Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536 3 1 4 136 2R 15339042 15339061 GTGTTCGACTGCTATAAGCG 59 15336239 15338943 TGATCTCCCAGAACTTGGC 59 NA InUTR Drosophila melanogaster 61 CG18606 FBgn0034428 FBtr0300592 2 1 1 65 2R 15175934 15175955 GGTCATACTTTCCAAATGTCTC 57 15175980 15175999 CTGGTGATGAACAGAGTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7229 FBgn0034423 FBtr0086511 1 1 1 80 2R 15147563 15147635 CTCTAGCATGGCATCTTGC 58 15147679 15147697 GGATGCGGTATAAACTCGG 58 NA InUTR Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 1 3 3 80 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010727 15010809 TGGCCACTAATTCAAAGTACG 58 NA Drosophila melanogaster 61 sec6 FBgn0034367 FBtr0086709 2 1 1 109 2R 14513726 14513745 CGTTGTGAAGTCCCTTTGTG 59 14513814 14513900 GCACAATGTTGTCAAGATAGCT 59 NA Drosophila melanogaster 61 CG5327 FBgn0034363 FBtr0086707 3 1 1 90 2R 14503859 14503956 GCGTTAGGGATTGCAACAG 59 14504010 14504028 CTCTCAAACATGTGCTGGG 58 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360,FBtr0113361 2 3 3 83 2R 14319248 14319329 AAGCTGAAATATTTGGTGGC 57 14319184 14319205 CAGATAATGATGTACGACATCG 57 NA Drosophila melanogaster 61 CG12263 FBgn0034346 FBtr0086691 1 1 1 80 2R 14315254 14315272 GTTTGCCTACTCCAAGCAG 58 14315316 14315403 ACCAGATCAATCTGCTGCA 59 NA Drosophila melanogaster 61 CG11419 FBgn0034231 FBtr0086951 2 1 1 148 2R 13405585 13405607 CCTCAATGGATGAGGATATAACC 58 13405400 13405477 ACGCTCTACACCAAATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6522 FBgn0034223 FBtr0086954 2 1 1 99 2R 13354509 13354591 CTTCTGGCAAGAATTCCACTC 59 13354430 13354448 TCCTTTCCTGCACGATCTG 59 NA Drosophila melanogaster 61 mthl3 FBgn0028956 FBtr0086955 1 1 1 86 2R 13336828 13336846 TTCAATTGGTCACAGGGCA 59 13336698 13336780 ACCCTTAATCCGTTCCTTCAG 59 NA Drosophila melanogaster 61 CG8317 FBgn0034140 FBtr0087122 3 1 1 139 2R 12463780 12463798 ATGTTTGCGTACACTTGGC 59 12462686 12462704 TAGTTGAACTGATTGGGCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4409 FBgn0034128 FBtr0113085 3 1 1 112 2R 12331524 12331542 TGTACGCCCTATTCTTCGA 58 12331618 12332182 CATTGAGTTCTGCAAACCG 57 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0301867 1 1 4 72 2R 12304391 12304470 TGGAAAGTACAATAAGGTGGG 57 12304339 12304357 ATCAATCCCATGATGCCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG15705 FBgn0034104 FBtr0087137 3 1 1 168 2R 12168647 12168668 GATTACATGAAGTATCCCAGCA 58 12168797 12169030 TCTTCAGCTGCTCATCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Tsf3 FBgn0034094 FBtr0087130 3 1 1 84 2R 12115392 12115410 TGATCTTCGAGGTGCAAGG 59 12115455 12115544 AGCTTCAAAGTAATTAGCCAGG 58 NA Drosophila melanogaster 61 CG10734 FBgn0034082 FBtr0087250 3 1 1 160 2R 12046095 12046192 GAGCTGAGAAGTCAAAGCC 58 12045953 12045971 TTGCCTTTAACATCGACGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8397 FBgn0034066 FBtr0087261 2 1 1 114 2R 11903959 11904042 AGAGCAGTGGAAGATCACC 59 11903863 11903882 CTTCTTTGTCTCGGGATCGT 59 NA Drosophila melanogaster 61 CG8389 FBgn0034063 FBtr0087204 2 1 2 123 2R 11895985 11899473 TACATCAACCAGCTTAATCTCG 58 11899557 11899575 ATTAATCAATGCAACGGCG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8366 FBgn0034054 FBtr0087201 3 1 1 81 2R 11842950 11842971 ATGTATCGCTTAAGATCGTCGA 59 11843013 11843088 GCACAAGTACATGCTGCAG 59 NA Drosophila melanogaster 61 CG34188 FBgn0085217 FBtr0112381 3 1 1 151 2R 11315227 11315245 CTTGTCACTAGGGAACCGG 59 11315041 11315115 GATATGTGACTCCATTCTGCAC 59 NA Drosophila melanogaster 61 Pms2 FBgn0011660 FBtr0087388 3 1 1 84 2R 11256044 11256062 GGTACAGCTCTTAGCAGGA 58 11255926 11255996 CATGTGGACAGTTCCATGG 58 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 1 3 3 80 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204762 11204781 TCGTATTCCTGAGTTTGCCA 59 NA Drosophila melanogaster 61 CG11807 FBgn0033996 FBtr0087363 3 1 1 84 2R 11089327 11089407 GCCGAAGAAGCTAGTTGGA 59 11089449 11089473 GAGAAGCTCCTGAAGATAAATTTCC 60 NA Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 2 2 2 121 2R 11068204 11076267 CCAACGACAAGGATCTGTG 58 11076349 11076370 CTTGGTTATCTCCTGAATGTCC 58 NA Drosophila melanogaster 61 RpI1 FBgn0019938 FBtr0087511 1 1 1 80 2R 10485817 10485895 GACATTAATAGTACTTGTCTGCCC 59 10485760 10485781 ACCAGATAGAACCATCAATTGC 58 NA Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 2 1 1 279 2R 10316248 10319430 GCGAAATTCAAGTTTCAGCC 58 10315988 10316006 AATAGACTATGGGTGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10102 FBgn0033927 FBtr0087559 2 1 1 133 2R 10249287 10249455 CAATCGTTAGACGAGCACAG 59 10249173 10249195 TGGAAGAAGTCCATGTAGATCTG 59 NA Drosophila melanogaster 61 CG42287 FBgn0259183 FBtr0299667 1 1 1 80 2R 9978280 9978364 TTCAGGTGTTCATCATAGTTGG 58 9978402 9978423 AATCCACACTGCTCAAATATCG 59 NA Drosophila melanogaster 61 CG6704 FBgn0033887 FBtr0087609 3 1 1 84 2R 9857800 9857867 ACGGATTAAATCCCTGGCT 58 9857734 9857753 CGCAGAAAGAGTACATTGGA 58 NA Drosophila melanogaster 61 CG18278 FBgn0033836 FBtr0087716 3 1 1 205 2R 9296746 9296764 CCTACCTAACCGATCTGCT 58 9296502 9296577 CAACCAGTGCTTATCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 3 2 6 88 2R 9148386 9150153 TGACAGTCTTCCAGGTTACC 59 9150204 9150222 GTCCTCCTCGTTGATCTCG 59 NA Drosophila melanogaster 61 CG17580 FBgn0040755 FBtr0087857 2 1 1 266 2R 8694365 8694383 TACTTCACCCTCAAGTCGG 58 8694668 8694686 CAGGCAAATGTAGACTGCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Obp49a FBgn0050052 FBtr0087872 2 1 1 70 2R 8578151 8578171 GAAGCAAGTGGATCCTTTGAG 59 8578040 8578119 CAGGAGAAGAAGCATGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 spt4 FBgn0028683 FBtr0087840 3 1 1 81 2R 8521467 8521552 AAGATTGTCCCGCTTTACTC 58 8521593 8521614 CTTCATGTCACGTAAGGTAGAC 58 NA Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 3 2 2 95 2R 8156862 8156880 GAGAAACTCACAGACGAGG 57 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 CG18343 FBgn0033683 FBtr0087982 2 1 1 60 2R 8026595 8026613 TCTTCGTCATCCGATTGCT 59 8026632 8026655 GAATAGCTAACAGATGTGATGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rho-7 FBgn0033672 FBtr0088045 3 1 1 106 2R 7874861 7874879 CTTAGCGGTCTACCTCAGC 59 7874719 7874791 TTATAGCTCCAGACGCACC 59 NA Drosophila melanogaster 61 CG30034 FBgn0050034 FBtr0088097 2 1 1 82 2R 7409059 7409458 TATACACGGCTCCATAAATGCT 59 7408998 7409016 GACACGTGTCCGTAGTCTC 59 NA Drosophila melanogaster 61 CG7741 FBgn0033615 FBtr0088118 1 1 1 82 2R 7192518 7192536 TCACCTACAAATCAACGCG 58 7192582 7192658 ATTCCTCCGCCTTATCCTC 58 NA Drosophila melanogaster 61 CG12343 FBgn0033556 FBtr0088247 3 1 1 60 2R 6710220 6710238 GAAGTACTCTCGCAGGAGG 59 6710178 6710197 CCTCTCGTTGATGAAGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12309 FBgn0033542 FBtr0088215 3 1 1 60 2R 6613337 6613356 ATCTCAAATTCAACGCATGG 57 6613376 6613397 CAGATCATCATAGTGGTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12129 FBgn0033475 FBtr0088395 2 1 1 103 2R 5920962 5920981 TAGAGTCAACGTTGTTCACG 58 5921046 5921117 CATAAAGATCCGGCTCTTCG 58 NA Drosophila melanogaster 61 CG12140 FBgn0033465 FBtr0088384 3 1 1 93 2R 5799669 5799687 AGTTCGGACTTAACGAGGG 59 5799743 5799827 AAACCAGGTTGATGCTTCTC 58 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0300920,FBtr0088381,FBtr0300919 1 4 4 83 2R 5782983 5783064 TTATCGAGCAAACTGAAGATCG 59 5783108 5783126 TACTGGGCAGTTGATTCCT 58 NA Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 3 2 2 119 2R 5592148 5592169 TCATATCGCAAGTGACTTAGAG 57 5592301 5592387 CACACTCTAATCTCCTTAGATCG 58 NA Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 1 2 2 63 2R 4996509 4996591 AGCTGGTGGTGATTCAGAC 59 4996464 4996482 GGATCAGGGTACTGTTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG33199 FBgn0053199 FBtr0088688 1 1 1 94 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838217 4838236 GAAGGTTAAACGGAAAGCGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34219 FBgn0085248 FBtr0112412 1 1 1 83 2R 4806150 4806168 TGGTATCTCCTTTGGCCAG 59 4806026 4806103 TAAGACGAGGCTCGAAACG 59 NA Drosophila melanogaster 61 gcl FBgn0005695 FBtr0088710 2 1 1 80 2R 4615274 4615363 GGAGGATTGTAGTCCTCAGC 59 4615406 4615424 GGCTCAAGCAACATACGTC 59 NA Drosophila melanogaster 61 CG30360 FBgn0050360 FBtr0273322 2 1 1 81 2R 4353752 4353775 GGATTCGTGAAGATAATCAGTAGC 59 4353814 4353911 GATCGTGATTTCCCATCACC 58 NA Drosophila melanogaster 61 whip FBgn0250827 FBtr0112411 2 1 1 60 2R 4250115 4250134 TACTCAGCTCCATTTGTCAG 57 4250074 4250094 ACTTCTTAGGCAGACTAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hubl FBgn0050364 FBtr0088772 2 1 1 60 2R 4249567 4249587 CAAGAGAATTGTGCTTATGCC 58 4249527 4249550 GTGAATAGTTCGACAAGTATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 1 2 2 92 2R 4020213 4020233 GCATACATTGAGTTTGGTTCC 57 4020284 4020455 CGACATTACCTTTATTTGACGC 58 NA Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088822 3 1 2 187 2R 3985934 3985952 TCCTGTTCCTGTACTTGCT 58 3985706 3985724 CTCGTAGCCAGAACACTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088933 1 1 3 80 2R 3629422 3645554 TCGTACAATGCAAAGTGCG 59 3629360 3629379 GTAGACGTCCATTCTGTTGC 59 NA Nonspecific Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837,FBtr0112838,FBtr0088938 1 3 3 80 2R 3596047 3596068 CCAAATGCCACCTACATAATCC 59 3595836 3596009 GTTGTCATCAGACAGGTAAAGC 59 NA Drosophila melanogaster 61 CG30491 FBgn0050491 FBtr0088919 2 1 1 87 2R 3542933 3542952 ATTTGCGTTTCTCAAGAGCC 59 3542998 3543085 CATAAGATCCTTCACGAAGAAGG 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300476,FBtr0088996,FBtr0300481,FBtr0300479,FBtr0300480,FBtr0300478 3 8 8 98 2R 3360841 3361234 TTGACGATACGTTGCAACG 59 3358356 3358374 AGCAACGCAGCAAATTCTC 59 NA Drosophila melanogaster 61 CG11141 FBgn0033177 FBtr0088998,FBtr0088999 3 2 2 146 2R 3348875 3348893 AGACATCCGTAGGCAAACC 59 3348692 3348765 AGGCCAGACCATTGTTCTC 59 NA Drosophila melanogaster 61 Ady43A FBgn0026602 FBtr0089050 1 1 1 220 2R 3132012 3132502 CTTCTGAGAGCTCTCGGTG 59 3131810 3131828 CTGATACATGAGGCACACG 58 NA DesignRelaxed Drosophila melanogaster 61 Spn43Ab FBgn0024293 FBtr0100356,FBtr0089054 1 2 2 83 2R 3039479 3039497 CATTAACGCAGTGGAGCAC 59 3039348 3039435 CCTTTAAGCAATCCAGTTTCCA 59 NA Drosophila melanogaster 61 CG17266 FBgn0033089 FBtr0086144 1 1 1 80 2R 2563157 2563176 TACAGTCCCAACTGAGAAGC 59 2563030 2563114 TCATTCGTCCGATTTCCGT 59 NA Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0302826 1 1 2 143 2R 1937716 1937789 GTACAATCTGACAGCTGCA 57 1937591 1937610 AGACCACCAAGTAGAAACAC 57 NA InUTR Drosophila melanogaster 61 CG34200 FBgn0085229 FBtr0112393 3 1 1 114 2R 1645321 1645425 AGTTTCAATGGATGCTGGTC 58 1645502 1645520 TAGTACTCTTAGGCTGGCC 57 NA InUTR Drosophila melanogaster 61 CG17508 FBgn0039970 FBtr0086071 3 1 1 101 2R 1496902 1496920 TGCAGTGCTCTCACTACAG 59 1496983 1497577 TAAACAACCCTTGGTCATTCG 58 NA Drosophila melanogaster 61 CG30440 FBgn0050440 FBtr0086076 2 1 1 80 2R 1372145 1373386 CAATCTTAAAGGGCTACTATGATCG 59 1372089 1372107 ACAGCACATTCGCTTTACC 58 NA Drosophila melanogaster 61 CG17665 FBgn0039997 FBtr0111269,FBtr0111268 2 2 2 86 2R 123439 123513 ACAATTCTAGCGAGGAGGA 57 123371 123392 GTCAGTCAGAATCATTGTTAGC 57 NA Drosophila melanogaster 61 cta FBgn0000384 FBtr0111126 3 1 1 111 2L 22875224 22875244 CTAGTAAGGCTGCGTAGTACC 59 22875317 22883495 GCAGTTTAACCTGACGTCG 59 NA Drosophila melanogaster 61 betaInt-nu FBgn0010395 FBtr0081461 1 1 1 92 2L 21053635 21055002 TTGGTCAAAGGAAACACGC 59 21055055 21055076 CCAGGTTAGATCCATCAATACG 58 NA Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0301291 2 1 2 83 2L 20820776 20820796 CGAGGATCCAGACATCTACAC 59 20820558 20820731 CTCATCCTAGCGTCGAAGG 59 NA Drosophila melanogaster 61 CheB38b FBgn0067311 FBtr0081454 1 1 1 83 2L 20816837 20816857 CTGGTTCAAGTATTGGTTCAG 57 20816715 20816793 ACTAGCACGGTATCTTTCAC 57 NA Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399 3 1 2 154 2L 20681740 20681760 ACTATTCGTACATGCAGTTGC 59 20681521 20681624 CTTGATGCGAACTTTGGCA 59 NA InUTR Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 1 5 5 82 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 vls FBgn0003978 FBtr0081347 2 1 1 128 2L 20065159 20065177 CATACTGCCTCTTCCTCGT 58 20064992 20065067 GATCCCAGACATTGAGGGT 58 NA Drosophila melanogaster 61 Victoria FBgn0053117 FBtr0081309 2 1 1 167 2L 19913381 19913456 CAAATCAGCTGCCTTCTCG 59 19913232 19913250 GTAGAAGGCAATCAGCGTG 59 NA Drosophila melanogaster 61 TotF FBgn0044811 FBtr0081310 2 1 1 122 2L 19912242 19912317 CTATTTGGCTTCCTGCTGG 58 19912138 19912157 TCTATCGACCTCTGAGTTGC 59 NA Drosophila melanogaster 61 CG10463 FBgn0032819 FBtr0081290 3 1 1 182 2L 19759333 19759351 AAGGGAGAAGATTTGGGCC 59 19759495 19759593 CACTTGGAGTTCTGAACTGAC 58 NA Drosophila melanogaster 61 Hs2st FBgn0024230 FBtr0081288 3 1 1 85 2L 19444551 19444569 GCTGATCCTGATAGCCCTG 59 19444419 19444502 GCTTGAAGGCATGTTCCAG 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 3 3 3 256 2L 19436954 19437040 CGTGATCTGATTAAGCGGT 57 19436540 19436558 ATCTGTGTTTCTGGCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG17597 FBgn0032715 FBtr0081121 3 1 1 101 2L 18830450 18830548 ATGACCAAGTTTGAGAAGCC 58 18830368 18830386 GAACTTGATTCCCGCATCC 59 NA Drosophila melanogaster 61 CG42400 FBgn0259819 FBtr0300108 1 1 1 80 2L 18164978 18164998 TCATGGTCAACTTCTACTCGA 58 18163953 18164938 TGTGATTAATATGCGCGACTG 59 NA Drosophila melanogaster 61 CG31785 FBgn0051785 FBtr0300025 2 1 1 83 2L 18125156 18125178 CACTTACGAAATAGGACTGACAG 59 18124997 18125116 TGATGATGCCTGTAGTGATAGG 59 NA Drosophila melanogaster 61 CG31741 FBgn0051741 FBtr0081032 2 1 1 80 2L 18084684 18084833 CTTTCCTACTTTGACAGCTGC 60 18084870 18084893 CGATTGAGAGTAAAGTTCATGACC 60 NA Drosophila melanogaster 61 Gr36b FBgn0045486 FBtr0080963 1 1 1 80 2L 17179845 17179926 GAGGAATCCTTTGAAAGTCTACAG 59 17179964 17179983 CGTGATAGGGAACATACCCA 59 NA Drosophila melanogaster 61 CG31805 FBgn0051805 FBtr0273383 1 1 1 87 2L 16900290 16900362 TTTCCTGTGGAATCCCAGG 59 16900221 16900239 TTGTGAGGTCGGGATAGTC 58 NA Drosophila melanogaster 61 CG6115 FBgn0040985 FBtr0080959 2 1 1 84 2L 16887665 16887801 TACAAGCACTTGCAGTATTTGG 59 16887602 16887620 TGAAGGCATCGTGGATCTG 59 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 2 2 2 134 2L 16800512 16800611 GTTCTATGACCGTCTTTGGAG 58 16800707 16800725 ATTACTCCAGGCACATTCG 57 NA Drosophila melanogaster 61 Ugt36Ba FBgn0040262 FBtr0080909 2 1 1 60 2L 16794444 16794463 TTGTGGTGCCTATGAAGGAG 59 16794486 16794504 GCCATTTCGGTCATTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 1 3 3 80 2L 16665211 16665231 GAGCAAGAATATTTGTCCGGT 58 16665100 16665173 CGCTTAAGGGTCTTATCATTCAG 59 NA Drosophila melanogaster 61 CG42231 FBgn0087041 FBtr0273183 3 1 1 80 2L 16342745 16342833 GATCTGGTTCGGTTCACCA 59 16342683 16342704 CCCACTCCTTCTGATAGTACTG 59 NA Nonspecific Drosophila melanogaster 61 CG5869 FBgn0028894 FBtr0080851 2 1 1 80 2L 16302570 16302589 TAAGCAACGAAGTTCTGGAG 58 16302443 16302529 CGACTTTCAATATCAAAGCCG 58 NA Drosophila melanogaster 61 CG7653 FBgn0028935 FBtr0080812 1 1 1 80 2L 15879397 15879418 GTAACCATGGGTCATCATAAGC 59 15879280 15879356 CTGTATTTCACGGTTGGGC 59 NA Drosophila melanogaster 61 CG18480 FBgn0028518 FBtr0080755 3 1 1 71 2L 15631557 15631576 CAAGAGTTGCTGTGAGATGC 59 15631610 15631694 TTCAGAGGAGCTGAAACCC 59 NA DesignRelaxed Drosophila melanogaster 61 osp FBgn0003016 FBtr0301494,FBtr0301496,FBtr0301495,FBtr0114465 1 4 4 80 2L 14602378 14602398 GAGCAGAAACACAAGATGGAG 59 14602244 14602336 CAAAGTGGCCTGAGTTTCC 59 NA Drosophila melanogaster 61 l(2)34Fd FBgn0261535 FBtr0080639 1 1 1 90 2L 14353624 14353704 ATGCACGGATACTTTATGGAC 58 14353554 14353572 TCTTATCTTTGCGGAAGCG 58 NA Drosophila melanogaster 61 CG15293 FBgn0028526 FBtr0080603 2 1 1 192 2L 14109137 14109209 CTTCTGAAGCTGAAGGGAG 57 14108963 14108981 CCGGACCTAACTCATAGGT 57 NA Drosophila melanogaster 61 tam FBgn0004406 FBtr0080571 1 1 1 92 2L 13825676 13825749 AAACCCAGTACCAAGGCTC 59 13825602 13825621 AGGAAGGTCCATTCTTGTGG 59 NA Drosophila melanogaster 61 CG31813 FBgn0051813 FBtr0080531 3 1 1 83 2L 13736326 13736344 ACAACAAGGAAGACTCCGA 58 13736391 13736409 CCTCCAGTCTGTCATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL24 FBgn0032518 FBtr0080524 1 1 1 216 2L 13394796 13394879 AAGATCGATGGCAAGTCGT 59 13394598 13394616 TACGCTTGGCCAGAATCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9302 FBgn0032514 FBtr0080470 3 1 1 81 2L 13377085 13377104 ATGACGACAACTTCAGTTCG 58 13376960 13377041 TTACAGTGTCCACACCAGG 59 NA Drosophila melanogaster 61 CG16974 FBgn0032479 FBtr0080489 3 1 1 81 2L 13186381 13186399 CTGGAGAACCTTCCTAGCT 58 13186250 13186337 AGTAGCAGTCTATGTCCTCG 58 NA Drosophila melanogaster 61 CG15485 FBgn0032442 FBtr0080412 3 1 1 60 2L 12668138 12668158 AAGGACACGTTCTATGATCTC 57 12668098 12668117 GCGAACGAGTATCTTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 2 1 2 99 2L 12673616 12673634 AAATGGTCGACATTGTCGT 57 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 prd FBgn0003145 FBtr0080299 2 1 2 148 2L 12085077 12085151 CTCTACCTAACATGAACAGCG 58 12084949 12084968 TAGCTGTCTGGAGATCACAC 59 NA InUTR Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 1 2 2 126 2L 11991264 11991341 AAATATAGCTCCCATGTCCG 57 11991428 11991448 CATAAATGGAAACCCGATCCT 58 NA Drosophila melanogaster 61 zuc FBgn0261266 FBtr0080316 3 1 1 60 2L 11989365 11989383 CAGATCAGTATGCTGGCAC 58 11989323 11989341 TCAAGTTCGTGGTAATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or33c FBgn0026390 FBtr0080280 3 1 1 97 2L 11938686 11938783 AAACTCTTGGTGCGATTCC 59 11938844 11938862 ACAATGATGCACAGAGTGG 58 NA Drosophila melanogaster 61 CG42470 FBgn0259960 FBtr0300308 1 1 1 80 2L 11753392 11753467 ATCAAATCCATGCTTTGCAG 57 11753331 11753351 GGCATTTCTATCGAATACCCA 58 NA Drosophila melanogaster 61 sala FBgn0003313 FBtr0080237 1 1 1 84 2L 11486214 11486305 AACTACTGATTGCTCTGTTTGC 59 11486349 11486368 CCTCCATATCCTCCTTGTCC 59 NA Drosophila melanogaster 61 CG14915 FBgn0032335 FBtr0080193 3 1 1 60 2L 11071195 11071216 CGAAATCATGGACCAGATATCG 59 11071234 11071255 CTTCACGAAATAATCCCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14070 FBgn0032313 FBtr0080177 2 1 1 96 2L 10901261 10901279 GATAGACGAGGGCTTGGAG 59 10901127 10901147 CAGATAGGCAAACAGTTTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG7294 FBgn0032284 FBtr0080128 1 1 1 63 2L 10689175 10689195 TGAAGACTCTGATTGTTCTCG 57 10689132 10689150 AATCCAAATTGCGGTAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819,FBtr0080101 3 2 2 80 2L 10649584 10649662 AAGAGCTTCAATACGACCCT 58 10649702 10649723 ATAGTGATAGATCTGTTTGGCG 58 NA Drosophila melanogaster 61 CHIP FBgn0027052 FBtr0080027 2 1 1 85 2L 10438621 10438641 GGCCAATTTAAAGCTGAATGG 58 10438687 10438765 TATGGTCATCGCATTCTTGC 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080014,FBtr0080009,FBtr0080012 2 6 6 80 2L 10398150 10398168 GTGCCCTTTGTGTATGGAG 58 10398210 10398289 AATCGGCAAATCTGATATCCG 58 NA Drosophila melanogaster 61 lft FBgn0032230 FBtr0080002,FBtr0302490 3 2 2 83 2L 10365673 10365783 GCATTCAGATTCATGCTGGAG 59 10365828 10365846 GTGAAGCAGTTGGAACACG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4594 FBgn0032161 FBtr0079878 3 1 1 112 2L 9920592 9920662 TTTAACCTCTGCCAGCTCC 59 9920736 9920756 TCCATACATTCTGCAATTCGG 58 NA Drosophila melanogaster 61 CG13120 FBgn0032142 FBtr0079923 3 1 1 80 2L 9765829 9765847 GAGTATCACCACCAACGTG 58 9765714 9765786 GTCAATCCCTTTAGCAACCC 59 NA Drosophila melanogaster 61 CG13114 FBgn0032127 FBtr0273329 3 1 1 88 2L 9545925 9546028 GTTGAAAGATGTTCGAACGC 58 9546079 9546097 ATATTCCGGGAAATGGGCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31883 FBgn0032122 FBtr0079829 3 1 1 60 2L 9528618 9528637 ACTGTTAAGATTTGCCTCCC 58 9528660 9528678 TCAGAAGTCCCTTAGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17005 FBgn0032109 FBtr0273186 2 1 1 81 2L 9327952 9328022 AATAACGGGCTTGAATCGG 58 9328067 9328085 GTGGATCTGGCGAATAGGT 59 NA Drosophila melanogaster 61 CG9573 FBgn0032089 FBtr0079779 1 1 1 60 2L 9013890 9013908 AAGTCCGGTAATGAGTCCC 58 9013848 9013867 GATGATCAACTGGTACACCT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 rost FBgn0011705 FBtr0079782 3 1 1 82 2L 8986655 8986673 GTGTACGGAATGAGTCTGG 57 8986522 8986610 TTGCCAAATTCATCTGTTCC 57 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 3 2 2 82 2L 8978779 8978870 CCAGAATATGCGGATAAACTG 57 8978717 8978737 AGAGATATGATGTGCATACCC 57 NA Drosophila melanogaster 61 CG18088 FBgn0032082 FBtr0079759 1 1 1 80 2L 8968365 8968781 GGATACAATAAGGTTGCCGAC 59 8968822 8968841 TTCCTTAGCCGTACTAGCTG 59 NA Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 2 1 1 134 2L 8308604 8308694 CAAACTTTGGGCTTGTCGA 59 8308792 8308810 TTTCTTGGAGGAAGAGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7025 FBgn0031930 FBtr0079515 1 1 1 80 2L 7691363 7691440 CTGCGGGCATTCTTTATCC 59 7691301 7691322 TGGTATACGATATCTCCACTCC 58 NA Drosophila melanogaster 61 CG5171 FBgn0031907 FBtr0302587,FBtr0079440,FBtr0079439,FBtr0114588 1 4 4 80 2L 7403301 7403319 CTGAGAAACAAGTGGCACC 59 7403357 7403561 GACTTTCAGAAATTAGATACCCAGG 59 NA Drosophila melanogaster 61 CG3476 FBgn0031881 FBtr0079389 1 1 1 80 2L 7027919 7027998 ACAATAAAGGTCCGTCTCCA 59 7028040 7028059 GGCACAATCTATGACTCCCT 59 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 2 5 5 80 2L 6961942 6961960 AATGGAATCGATTCAGCCG 58 6961816 6961898 TCGTTCATCAACCACATGC 58 NA Drosophila melanogaster 61 CG13775 FBgn0031874 FBtr0079363 2 1 1 81 2L 6956213 6956632 GAATTGAATCTGCACGAAACAG 58 6956153 6956171 CCAACTTCTCATCACAGCG 58 NA Drosophila melanogaster 61 Gas41 FBgn0031873 FBtr0079364 1 1 1 94 2L 6949526 6949603 CATGACACTGACTTTGAGGA 57 6949451 6949472 TCCTTAAGTGTAACAATCTCCC 57 NA Drosophila melanogaster 61 Rat1 FBgn0031868 FBtr0079345 2 1 1 60 2L 6908874 6908894 GATCTCATCATGTTGGGTCTG 58 6908915 6908934 ACTCCTCCCGAATGATTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sens-2 FBgn0051632 FBtr0079341 2 1 1 72 2L 6823040 6823058 CAAGAAGCGAAACTCCGAC 59 6831202 6831222 CGTTAGTTGTTCAGTCTTGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 1 3 3 101 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 CG31637 FBgn0051637 FBtr0079287 1 1 1 80 2L 6525754 6525775 CAGTTCCACATATCGAGATTCC 58 6525813 6525896 TGGATTTGCTTGATCTCTTCTG 58 NA Drosophila melanogaster 61 slmo FBgn0029161 FBtr0079218 2 1 4 114 2L 6047770 6047907 GAGTAAAGGCTCAGCTCAG 57 6047674 6047692 TATGTGCTCCGATGTCCAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13992 FBgn0031756 FBtr0079237 3 1 1 60 2L 5966634 5966652 GAGCTCCAACAGCAATACC 58 5966592 5966612 ACATCAACTGATCTTCTGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34381 FBgn0085410 FBtr0112618,FBtr0112619 2 2 2 81 2L 5850189 5850207 GTATGGAGCGCTACTTTGC 59 5850251 5850841 ACAATGACCATCCTCAGACG 59 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079086 2 1 4 84 2L 5241494 5271274 TAACAACTGGTGAATTCAGTGC 59 5241431 5241449 GATCCCATTTCCATGCCAC 59 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0079017,FBtr0302570 1 3 3 190 2L 5071307 5071325 GATGGAAATCACCCAGCAC 58 5071732 5071750 GTTCCTTGGTTTCACGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34178 FBgn0085207 FBtr0112370,FBtr0112369 3 2 2 86 2L 4434740 4434858 GGAATGCTGTTTACGTGTG 57 4434907 4434926 ATCTGGATAATTGGCATCCC 57 NA Nonspecific Drosophila melanogaster 61 CG31960 FBgn0051960 FBtr0077494 2 1 1 60 2L 3785172 3785192 TTCAGTCCATGATAAACGAGG 57 3785214 3785232 AACTCCTCCTTTGCAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pgant2 FBgn0031530 FBtr0077592 3 1 1 80 2L 3407297 3407316 GAGTGTCCTTAACCGAAGTC 58 3407138 3407254 CCATCCTCAGGATGATCAC 57 NA Drosophila melanogaster 61 CG3605 FBgn0031493 FBtr0077669 3 1 1 80 2L 3027271 3027347 GACCTTGATAATGGCGTAGAC 58 3027211 3027230 GGATGATTCTTCTGACTCCG 57 NA Drosophila melanogaster 61 aph-1 FBgn0031458 FBtr0077716 3 1 1 90 2L 2766628 2766646 ACATCCTGGCCTATGTCTC 58 2766700 2766777 CCGGGACCACTCATATCAG 59 NA Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 2 2 2 97 2L 2718916 2719013 ATCATTATGCTGACTTCCTGG 57 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 Prosbeta4R1 FBgn0031442 FBtr0077697 3 1 1 61 2L 2653186 2653204 ATACTGGCCTCGGATACCA 59 2653229 2653298 TTTCTGACCTCGTCATCCA 58 NA DesignRelaxed Drosophila melanogaster 61 p16-ARC FBgn0031437 FBtr0077694 2 1 1 107 2L 2580569 2580649 CCAGAATGTGAAGGACCAC 58 2580720 2580738 ATTAGGTCGTTCTGGTCCA 58 NA Drosophila melanogaster 61 CG3515 FBgn0031431 FBtr0077750 2 1 1 85 2L 2552319 2552508 ACCTCAAAGCATGACTACAC 57 2552253 2552271 ATAGTCTTTGCATGGCCAC 58 NA Drosophila melanogaster 61 VGlut FBgn0031424 FBtr0077769 2 1 1 82 2L 2407027 2407048 TTCGAATGGAATTGGTACTCTG 58 2407091 2407172 AACACCCGGTAGGATTAGC 59 NA Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077766,FBtr0077765 1 2 2 129 2L 2378209 2378227 CAACTATTCACCTGCCCAG 58 2378374 2378398 CAGAGACTTATCTTTGTTCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31949 FBgn0051949 FBtr0077757 2 1 1 60 2L 2300479 2300498 GTCTGAATGAGCAACTCTCC 58 2300520 2300539 ACCATTGTCAGTATAAGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 2 1 1 65 2L 2240266 2240356 GAAACTGTACGCACTGCTG 59 2240219 2240239 GTATCCACGTCGAATTCTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 mio FBgn0031399 FBtr0077835 2 1 1 80 2L 2219095 2219170 TATGCTACAGGAGTGAGCAG 59 2219211 2219231 CTATAAAGCGATCCAGCTCCT 60 NA Drosophila melanogaster 61 CG31672 FBgn0028952 FBtr0077825 3 1 1 91 2L 2046208 2046437 CTTTCAAAGAGCCATACATGC 58 2046490 2046508 GTTATAGACTCCTGGCGCT 59 NA Drosophila melanogaster 61 CG17652 FBgn0031361 FBtr0077904 2 1 1 134 2L 1731803 1731887 AATCGATGACCAAAGACAATCG 59 1731690 1731711 CTTTAGATGGTGCTTCCAAGAC 59 NA Drosophila melanogaster 61 CG31937 FBgn0031360 FBtr0077884 3 1 1 60 2L 1730803 1730823 TTGGCCAATAAGATGGATCTC 57 1730845 1730863 AGTAGGCCAAGAGGTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mur11Da FBgn0052644 FBtr0300212 3 1 1 100 X 12862152 12862270 TTCAGTGGACAAGAGTTATTCG 58 12862329 12862349 CGGTGATTGAAATAGTAGCCA 58 NA Drosophila melanogaster 61 CG7246 FBgn0030081 FBtr0071353 1 1 1 86 X 8974819 8974896 CAGGTCAGAGAAATCGTTAGC 58 8974753 8974771 GAAGTCCAGGTAGTCGGTG 59 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 3 3 4 103 X 5794972 5794990 CGTCTAATCCAGAGACACC 57 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Su(Ste):CR42438 FBgn0259869 FBtr0300166 1 1 1 134 U 9441244 9441262 GAGTGAACGGCAACATGTC 59 9441360 9441378 CCTTGATTCCGAGGAACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BRWD3 FBgn0011785 FBtr0084604 3 1 1 85 3R 20146561 20146579 TTAAGGGACTACTGCACCC 58 20146627 20146707 AGAACGCGATCTAAGTTGTG 58 NA Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 2 2 2 60 3R 11056767 11056786 GGATCCTTGGCCTATATCCT 58 11056809 11056893 TTGTAATGGAGGTTTCGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 3 2 2 91 3R 11029203 11029284 GGAACTTAATCCTATCCTTGCC 58 11029133 11029151 AAATCGTCTCGGAGGTCAG 59 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 2 8 8 80 3R 5954403 5954422 TCTCCAGGGATTACTTGAGC 58 5954228 5954363 ATTCATGAACCGGATAGGTCTC 59 NA Drosophila melanogaster 61 Scm FBgn0003334 FBtr0082102 3 1 1 80 3R 5462268 5462346 GATGCCTATCTAGAGGAAACG 57 5462208 5462228 ATCATTGTTGGGAGGATTCTG 58 NA Drosophila melanogaster 61 CG11033 FBgn0037659 FBtr0300691 2 1 1 80 3R 4886240 4886329 CTATGACTATAAGCCTCGCCA 59 4886371 4886389 CCTTGACCATGGGAAACAG 58 NA Drosophila melanogaster 61 CG10154 FBgn0036361 FBtr0075854 2 1 1 99 3L 13429169 13429329 AACTGCACGATTGATGCTG 59 13429088 13429108 AGAAGTGAGTTCCCATAAGGG 59 NA Drosophila melanogaster 61 CG10361 FBgn0036208 FBtr0076084 3 1 1 86 3L 11792270 11792350 ATGAGATGCTAACCCGTGG 59 11792202 11792220 AGATTTGAACACGGATGCG 58 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 2 3 3 108 3L 9581445 9581463 ATATCCTCATCGGAGCTGC 59 9581535 9584349 CCAAGTGCTCTTTCTTGGG 58 NA Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073027 1 1 2 68 3L 3160099 3160191 GAATCATCTTAAGTGGATGGGC 59 3160220 3160238 TTATCATTACGCAGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 scramb2 FBgn0035390 FBtr0073005 3 1 1 149 3L 3045121 3045731 AACTTCAAGGTATTGAGCGC 59 3044991 3045010 GAATATGAGCGCCTTCATGC 59 NA Drosophila melanogaster 61 CG32298 FBgn0052298 FBtr0299807 1 1 1 80 3L 2390411 2390490 TTCAAAGGACCTATCAACAGG 57 2390351 2390369 GTCGACCCATTGATATCGT 57 NA Nonspecific Drosophila melanogaster 61 fd59A FBgn0004896 FBtr0071898 1 1 1 93 2R 18756297 18756315 AGCTCTAATCACCATGGCC 59 18756372 18756710 GTAGTATGGAAAGCGCGAC 58 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 3 4 4 136 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 CG13086 FBgn0032770 FBtr0081197 3 1 1 88 2L 19364541 19364559 TACTTCGTTGCTGACGAGG 59 19365017 19365035 CTATCCAGGCAAACTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12602 FBgn0032373 FBtr0080255 3 1 1 82 2L 11743935 11743953 TTGCTCACAGTCGGTATCC 59 11743999 11744079 ATGAACTCAACCCAGTGCA 59 NA Drosophila melanogaster 61 slp1 FBgn0003430 FBtr0077499 1 1 1 60 2L 3826311 3826329 GTGCTTCACGAAGATTCCC 59 3826353 3826371 CAGGATCCAGTAGTTGCCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17012 FBgn0031406 FBtr0077804 1 1 1 60 2L 2254987 2255007 GTACATTTGCTGATTTCTCCG 57 2254947 2254965 CGATGATGCGTTCAGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 1 2 3 186 2L 132079 132099 CACAAGACTTCCAAACATCGA 58 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 CG11374 FBgn0031214 FBtr0114507 2 1 1 60 2L 76959 76978 TCCGAGTATCCTATACGCCT 59 76998 77019 GTTTGTTTGAATGTGGAATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 3 2 2 69 2L 8087 8108 GGTCAAGAAAGTCAGTGAAACC 59 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 fos28F FBgn0013442 FBtr0273229 1 1 1 88 2L 8180784 8180802 GTCAGTCGTCAACCAATGC 59 8180854 8181070 CTTATCCGCCGACATTTGC 59 NA Drosophila melanogaster 61 otk FBgn0004839 FBtr0088028 2 1 1 96 2R 7891718 7892707 TGCAATGGGTTAGGGATGG 59 7891640 7891660 TGTTCCGAGTTAACGTTTCTG 59 NA Drosophila melanogaster 61 CG30487 FBgn0050487 FBtr0087802 2 1 1 60 2R 8825673 8825691 GCAATAGAGGCAACTTTGG 57 8825631 8825650 GTGTATGCTTCGGAATTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CAH1 FBgn0027844 FBtr0080539 3 1 1 184 2L 13803947 13808811 TACACCGAAGAGAACGGAC 59 13808958 13809044 CAGCAATAGCCAGGATTGAC 59 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079952 3 1 2 83 2L 10232590 10232608 GGACAAATTCTGGGCTGAC 59 10232654 10233494 CTGCGATCAGTTACCTTCTG 59 NA Drosophila melanogaster 61 Sgf11 FBgn0036804 FBtr0113179 3 1 1 60 3L 18674572 18674590 CGAAAGTCAGGGAATCTGG 57 18674530 18674551 ACATTCGATAGGTTGAGTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 frtz FBgn0086698 FBtr0077911 2 1 1 89 2L 1712078 1712153 GTGGTGCCAGAAATTCCTC 58 1712007 1712025 AGGATTTGTCAGATGTCGC 57 NA Drosophila melanogaster 61 Sgt1 FBgn0260939 FBtr0081862 2 1 1 60 3R 4130795 4130813 AGACCAAGGTGGTCATCAC 59 4130753 4130774 TCCACAGCATAGTTCTTATCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kl-3 FBgn0001314 FBtr0113756 2 1 1 87 YHet 63547 63565 GGAATCCCGCATTTAGGTG 58 63615 63784 TCTTCTAATTCTTTCGCGCA 58 NA Drosophila melanogaster 61 snoRNA:Me18S-C1024 FBgn0086043 FBtr0114319 2 1 1 61 X 1995976 1995995 CAATTCAAAGTGCTTTCGCT 58 1996018 1996037 ATTGTAGCCATCCTGTGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tak1 FBgn0026323 FBtr0077319 2 1 1 113 X 20393464 20393541 ATCTACAAGGGTGAACGCC 59 20393369 20393387 TATGTACTGCATCGACGGG 59 NA Drosophila melanogaster 61 Mer FBgn0086384 FBtr0074754 2 1 1 125 X 19587275 19587479 CAAACAATCGACCATCAGC 57 19587168 19587186 ATCTAGTGGCACGATTCCT 58 NA InUTR Drosophila melanogaster 61 CG14210 FBgn0031040 FBtr0074740 1 1 1 116 X 19510428 19510510 GCCCAAGCAGAAATTTAGCA 59 19510589 19510607 TCCTTGATCTCCTTGGAGC 58 NA Nonspecific Drosophila melanogaster 61 CG14200 FBgn0031023 FBtr0074721 1 1 1 125 X 19404052 19404070 ACAACACCGAGATCTGGTG 59 19404159 19404248 AACTCACTTGCTCGAAGGT 59 NA Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 2 1 1 72 X 18660465 18667262 TCTTTCAGTTCTCGCAAGC 58 18660411 18660429 TAGCGCTCACAGGATATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12672 FBgn0030886 FBtr0074539 3 1 1 60 X 17900150 17900171 CCTATGAGAAGTACCCATCACC 59 17900111 17900129 TAGGTGAGGCTTAAGAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5703 FBgn0030853 FBtr0074452 3 1 1 80 X 17527123 17527300 GATCAACGATGACTACTATGAGGA 59 17527336 17527357 GATATCTTATCCGCCTTCAGGT 59 NA Drosophila melanogaster 61 CG4653 FBgn0030776 FBtr0074321 3 1 1 232 X 16598125 16598145 GTCCGGTTCAGTCATATTCAC 58 16598339 16598660 TTTAGCTGGGTAGCTCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6308 FBgn0030645 FBtr0074036 1 1 1 61 X 15366374 15366392 AGACATCGAACAGACGGAG 59 15366417 15366435 TAGAGTCACTGTTGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32613 FBgn0052613 FBtr0073887 2 1 1 108 X 13847250 13861313 TTTAGTTTAAGGTGAGTGGCG 58 13847162 13847180 CATGACGTCAAGCTGTTCC 59 NA InUTR Drosophila melanogaster 61 CG12096 FBgn0030457 FBtr0073727 2 1 1 168 X 13054901 13054919 CACAGGGCAAGATACTGCT 59 13055049 13055125 TTAATGATTTCTGTGGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748,FBtr0073747 1 2 3 103 X 12981165 12983401 CTGCCCATGCTTTCTAGTG 58 12981080 12981098 ATGTCCGTTTCCGAAACTG 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0273235,FBtr0073522 1 4 4 80 X 11562931 11563024 GAGTATCGCATTGTATACCACG 59 11563065 11563083 TGTGAATCGAGTCCGATCC 59 NA Drosophila melanogaster 61 CG2247 FBgn0030320 FBtr0073536 1 1 1 80 X 11502180 11502282 GTTGCAATCTGAAAGTGATTCC 58 11502121 11502141 AACTGGAGCTACATTTGTCCT 59 NA Drosophila melanogaster 61 CG1628 FBgn0030218 FBtr0071510 2 1 1 104 X 10493299 10493317 TCTATCGCGGATTGAGCTC 59 10492957 10493231 ATTGATCATCCCTGCGGAG 59 NA Drosophila melanogaster 61 CG11284 FBgn0030056 FBtr0071222 2 1 1 268 X 8581518 8581536 ACTTCCATTGGTCGGACTG 59 8581767 8581861 TGATAGGCAATCGGAATCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG32712 FBgn0052712 FBtr0300386 1 1 1 100 X 8327495 8327513 TGTTCACGCTGCTCTACTC 59 8327360 8327431 CAGCATCATCGCATTGGAG 59 NA Drosophila melanogaster 61 CG10932 FBgn0029969 FBtr0071143 2 1 1 60 X 7781736 7781754 CCAAATTACTGAAGCGTGC 57 7781694 7781712 TCATTGACCTCCCACATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14431 FBgn0029922 FBtr0071002 2 1 1 60 X 6854376 6856211 TGTCATTTACAAAGGGAACTGC 59 6856229 6856250 CCTTTGAATCCTCCACAATCAG 59 NA DesignRelaxed Drosophila melanogaster 61 iav FBgn0086693 FBtr0070969 2 1 1 80 X 6709395 6709416 CTACAGTAACATCACCTGTTCC 58 6709453 6709532 GAATTCCAATTAGTCCTTCCGTC 59 NA Drosophila melanogaster 61 CG4660 FBgn0029839 FBtr0070886 3 1 1 170 X 5973505 5973652 ATTTCGCGGATTATTTACTGGG 59 5973356 5973374 GAATCCGTTGGAGGAGGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083,FBtr0301084 1 2 2 127 X 5601330 5601416 CTTCTTCGATAAGAATAATCCCTGC 59 5601501 5601519 CGATGCACATGTTGTTCGT 59 NA Drosophila melanogaster 61 CG32762 FBgn0052762 FBtr0070791 1 1 1 168 X 5395179 5395197 AATGCACAGCCAACAACTG 59 5394958 5394976 AACTCTGGGACTTGTCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 1 5 5 113 X 4962727 4962745 AATCTCTGCGAGAAGAGCT 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 3 4 4 153 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598371 GAGTGTTCACATAGTTGATGGC 59 NA Drosophila melanogaster 61 CG10804 FBgn0029663 FBtr0070592,FBtr0114487,FBtr0070591 2 3 3 62 X 3372653 3372671 TGTGGATACCAATTGTGGC 58 3372548 3372566 GATCCGAGTCTTCCACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 2 2 2 92 X 2268795 2268814 ATATCTACTCCACGTCGGAG 58 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 mei-38 FBgn0260986 FBtr0070258 2 1 1 87 X 1371276 1371294 ATCAACGTGGGTGACTACC 59 1371432 1371450 TAACATTGCTGAGGCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 O-fut2 FBgn0027791 FBtr0070296 3 1 1 60 X 1359769 1359787 TACGACGTAAACATCTCCG 57 1359727 1359745 CCGCCATGCGAATATAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3719 FBgn0024986 FBtr0070233 3 1 1 86 X 1274226 1274244 AGAAGTACCTGTCGCAGTC 59 1273393 1274176 CGCTGTTGATCACCTTCTG 58 NA Drosophila melanogaster 61 Su(Ste):CR42414 FBgn0259845 FBtr0300136 2 1 1 60 U 6754282 6754300 AGCAGAAATGTTTGTCCGA 57 6754240 6754258 CATATCAACGTACTGCGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3571 FBgn0082954 FBtr0113580 1 1 1 60 3R 1423382 1423401 AGAGTAAGAAAGTTCGACGG 57 1423341 1423359 CCCAAATGAAGCGAAAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15545 FBgn0039806 FBtr0085719 1 1 1 80 3R 26697912 26697994 GTGCTGGAATTTCTTTGCTG 58 26697851 26697870 CTCCGATAGTAGGATCGTGG 59 NA Drosophila melanogaster 61 Cpr100A FBgn0039805 FBtr0085710 2 1 1 110 3R 26693398 26693640 TCAGATTTCTTGCACTGACC 58 26693713 26693731 CATCTCCGGACAGATAACG 57 NA Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 2 2 2 81 3R 26332227 26332250 CTCATTCAGTGGACTTATTCACTG 59 26332289 26332361 CCAGCGATGTATTGTGATGG 59 NA Drosophila melanogaster 61 CG15539 FBgn0039782 FBtr0110859,FBtr0085655 1 2 2 81 3R 26332231 26332251 TTCAGTGGACTTATTCACTGC 58 26332293 26332365 CCATCCAGCGATGTATTGTG 59 NA Drosophila melanogaster 61 CG15533 FBgn0039768 FBtr0085626 2 1 1 86 3R 26256517 26256610 ATGAGAAAGTACTGGCGCT 59 26256660 26256678 AAGAGATCCTGCCAAGCAG 59 NA Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085358,FBtr0085357 1 2 2 60 3R 24860878 24860896 CATTACGCCTTTGAACGCT 59 24860920 24860938 CACCTTGACGATCTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31058 FBgn0051058 FBtr0085198 3 1 1 60 3R 23474723 23474742 TTCTCCACAGGATTACCCAG 58 23474682 23474703 CATGACATACTCTGACTTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eater FBgn0243514 FBtr0301115 3 1 1 81 3R 22925218 22925296 TAAAGGAACTGCTGTGAACG 58 22925156 22925174 AAGACATCTGAGTGCGGAG 59 NA Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 3 1 1 64 3R 22772353 22772425 TTATGCGCACGTTTAGAGC 59 22772451 22772471 CGAATAATGAATCCACTCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG6425 FBgn0039449 FBtr0085047 1 1 1 80 3R 22542945 22542963 ATCTTTAACGCTCAGCACG 58 22542824 22542842 CTTACATTGTGCCCTGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14238 FBgn0039429 FBtr0085014 1 1 1 85 3R 22285271 22285289 CATGCAGTTCACCATCGTG 59 22285335 22285419 AGTCTGTATGTTCCTCCTTGTG 59 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544 2 1 6 87 3R 22084764 22084785 TGACTTTGATTACATCAGAGGG 58 22083753 22084716 CGAGTGTAGTTCTCGACGA 59 NA InUTR Drosophila melanogaster 61 CG31102 FBgn0051102 FBtr0084862 3 1 1 89 3R 21120546 21120828 GAGTTGAAAGATGGATTCTCAC 57 21120478 21120496 GGTATTCACGAATCCACCA 57 NA Drosophila melanogaster 61 CG13826 FBgn0040590 FBtr0084391 1 1 1 81 3R 19048838 19052176 GGTACCAAGCGTAGTTGAC 58 19048775 19048793 GGCAGATCCTCTAAGTCGA 58 NA InUTR Drosophila melanogaster 61 CG6697 FBgn0027526 FBtr0084347 3 1 1 83 3R 18887527 18887605 ACCTGAAGTACAAAGGAAAGAC 58 18887646 18887667 CCATCATAAGCTTAAAGTTGGG 57 NA Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874,FBtr0084169 1 2 2 95 3R 17821416 17821435 CCAACCACTGTAAGACAGAG 58 17821491 17821577 GTGATGTTTGGTTGTTCTCAG 57 NA Drosophila melanogaster 61 MtnD FBgn0053192 FBtr0083902 3 1 1 165 3R 16360755 16360839 GTGGAACAAACTGCCAGTG 59 16360966 16360986 CCAAAGGGTCTTTCATCACAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14294 FBgn0038656 FBtr0083726 1 1 1 60 3R 14727708 14727727 ATTTCTACGTCAAGCTGGAG 57 14727667 14727687 GCACTATCCAATACTTCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 2 2 2 60 3R 13837421 13837824 CATCTCTTTAGAGACCAACAGC 58 13837842 13837863 CTGATTGTTGCTTGATTGTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14324 FBgn0038527 FBtr0083500 3 1 1 134 3R 13444490 13444510 TCCAATAGAGAACATGAGGCA 59 13444321 13444341 ACAAAGTTGTTGTAGACAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cad89D FBgn0038439 FBtr0301702 1 1 1 80 3R 12316381 12316400 ATCACCAATCTCACCATCCA 58 12316236 12316343 CATGTTGATCTCTTCTATGACAGG 59 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 3 1 1 131 3R 11310036 11310122 ATTGTGTACGGATTGAGCC 57 11310217 11310235 CTGCGATTCGCTAATCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052,FBtr0301845 3 2 2 125 3R 11052135 11052153 ACTACACGAAGCATCCCAG 59 11052241 11052370 ACAGCAAATAGCCATTGAGG 58 NA Drosophila melanogaster 61 CG6654 FBgn0038301 FBtr0083139 3 1 1 81 3R 11038033 11038051 CTTAGCAAGCACATGGTGC 59 11037915 11037991 ACAGCATGGTGAATACTTTCTG 59 NA Drosophila melanogaster 61 CG14841 FBgn0038218 FBtr0082951 1 1 1 80 3R 10087944 10088034 GATAAGCGACTCGGATCCT 58 10087882 10087900 GATGATCCTCCACTTGCAG 58 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 3 2 3 93 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115990 8116010 ATCTATGGGACAGTTTCTGCT 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082456 3 1 6 86 3R 7417729 7418101 GGCTCGAGATCAGTCTTCC 59 7416974 7416992 CTGGGAATACTCGTTGGCT 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082456 2 1 6 83 3R 7417729 7418101 GGCTCGAGATCAGTCTTCC 59 7416977 7416996 GGAATACTCGTTGGCTACGA 59 NA Drosophila melanogaster 61 CG8165 FBgn0037703 FBtr0082063 1 1 1 131 3R 5341847 5341865 AGAAGTTTGGCTCAAGCCA 59 5344051 5344071 GAATGAGGTCGAGGATATGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or85c FBgn0037591 FBtr0081899 2 1 1 88 3R 4337629 4337647 ATAGCTCGACCTCAGAGGA 59 4337499 4337579 GATACTTGAAGAAGGTCCGTC 58 NA Drosophila melanogaster 61 CG31482 FBgn0051482 FBtr0081679 2 1 1 86 3R 2427063 2427142 CTCTATGTTTGTTGGTGTTGGT 59 2427189 2427207 GACTTCCATGCTTCTCCCT 59 NA Drosophila melanogaster 61 CG31549 FBgn0051549 FBtr0078707 2 1 1 62 3R 1458450 1458468 GATGAACACCAATGTGCGT 59 1458494 1458512 TTGACTAGCTCTGGAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Karybeta3 FBgn0087013 FBtr0078860 2 1 1 138 3R 476446 476528 TCTACAAAGGGCTTCCAGC 59 476630 476648 TCGTCGATCAGATTCCTGG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-A30 FBgn0086081 FBtr0114357 1 1 1 60 3L 17996159 17996177 CGTGGGTGATGAACTTCAG 58 17996117 17996137 CCAGGTAAGTCCCAATAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32458 FBgn0052458 FBtr0078566 3 1 1 60 3L 23025271 23025291 CCAGAGTGATTCTGTTGAGAC 58 23026604 23026623 AAGTGGATTAATAGCGAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620,FBtr0300619 3 2 2 60 3L 22980831 22980850 ACCGAAAGAACTTCACTCAG 57 22980873 22980891 TGACTTGGACCTTAGAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33772 FBgn0053772 FBtr0300027 2 1 1 118 3L 22645110 22645171 TACTGTATCTCATCGTTGGCA 59 22645012 22645035 GTCCCTAACATAAACACTAGAGTC 58 NA Drosophila melanogaster 61 CG10510 FBgn0037059 FBtr0078310 1 1 1 80 3L 21201947 21201965 AGATGGATCGCGAGATCAC 59 21201830 21201903 GCTTCTCCATTTGCTTGGT 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 2 6 6 144 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684742 19684912 GATCCTCATCGACAGAGCA 59 NA Drosophila melanogaster 61 CG9629 FBgn0036857 FBtr0075017 2 1 1 104 3L 19261550 19261956 CCTACCAACATGTTGGCAC 59 19261464 19261484 AATGAGATATGACGAGGACGA 58 NA InUTR Drosophila melanogaster 61 star1 FBgn0036790 FBtr0089578 1 1 1 80 3L 18567824 18567907 GGTACTGACGGTGATAAGTG 57 18568006 18568024 GGATTCGAGTGAATCAGGG 57 NA Drosophila melanogaster 61 CheA75a FBgn0036783 FBtr0075129 2 1 1 189 3L 18245231 18245310 AAATAAAGTGCGAGCAGTCC 59 18245461 18245480 CTTGAATAGAGCTCCACGGA 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075199 3 1 3 184 3L 17638043 17638062 GCCATCTTTCTGAAGTGAGG 58 17636815 17637085 TTGACCTTTACGCTGACCA 59 NA InUTR Drosophila melanogaster 61 sec3 FBgn0086475 FBtr0075231 1 1 1 80 3L 17417305 17417324 ATGCCATGATCGAAATTGCC 59 17417186 17417265 GCAGATCCAGTTGACTTATGAC 59 NA Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0075377 3 1 2 127 3L 16335200 16335218 ACTGCTGAGGCTAAGAAGG 59 16335309 16336904 TAATAGGCACGCCCTTGAG 59 NA Drosophila melanogaster 61 CG13046 FBgn0036595 FBtr0289963 1 1 1 74 3L 16281333 16281416 CCCAATTTGACTTGTGTATGGA 59 16281280 16281298 ATCCAGGTGTGAGACATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 1 2 3 80 3L 15580157 15580175 ATGAGCCGAACACATTCTC 57 15579691 15580113 TGTCCTTACCCTGTGAGTC 58 NA Drosophila melanogaster 61 CG9040 FBgn0036394 FBtr0075765 1 1 1 60 3L 13981132 13981155 GACTATGGTGATGACTACTATGAC 58 13981173 13981192 CAACACCACTTTCCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11262 FBgn0036329 FBtr0075872 2 1 1 60 3L 12989102 12989121 CCTCGGTATGATGATACTGG 57 12989142 12989162 AGCCATCCAATCAAATACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6409 FBgn0036106 FBtr0076273 2 1 1 83 3L 10874948 10875116 GAAGTCGGTTATTATTCTCTTAGCC 59 10874889 10874908 AGCTCCTCAGAGGTAGACTC 59 NA Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 2 2 2 97 3L 10081407 10081905 TGGCATATACCTCCAGTGG 58 10081328 10081346 ACTGACGCTACTGTAGCAG 59 NA Drosophila melanogaster 61 RpS17 FBgn0005533 FBtr0076479 2 1 1 115 3L 9422355 9422373 AGTACTACACTCGCCTGAC 58 9422199 9422276 CAAATGGGTGACATAGCCG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 2 5 5 80 3L 8778944 8778962 GCGTTATATGTCCAAGCCG 59 8779005 8779080 TCCTCAAATTTGAGAACCGC 58 NA Drosophila melanogaster 61 Uba2 FBgn0029113 FBtr0076734 2 1 1 94 3L 8120383 8120459 GTAACATCTACTGATTATGGCGTC 59 8120312 8120332 CGATTTACATGATTCCTGGCG 59 NA Drosophila melanogaster 61 CG32374 FBgn0052374 FBtr0076828 2 1 1 60 3L 7533932 7533950 CGATGGATTCTAACTGCCC 58 7533890 7533909 CTCGAACAGTATACCTTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 1 2 2 94 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124305 7124325 TGAAGAGACCGTAGAATTCCA 58 NA InUTR Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950,FBtr0076951 1 3 3 80 3L 6739583 6739677 GATCAGCATCACGAACATACC 59 6739523 6739543 GGATATGCTGTCGAACAACAG 59 NA Drosophila melanogaster 61 Or65a FBgn0041625 FBtr0077004 2 1 1 138 3L 6313842 6313914 CCAGTTGAAAGCCCTAGGT 59 6314014 6314034 ACCGATGGATTCACTGATACC 59 NA Drosophila melanogaster 61 CG32406 FBgn0052406 FBtr0077037 2 1 1 80 3L 6013198 6013216 CCGATGAGGATAATTCGCC 58 6013260 6017746 TTGTCAAGCGTTTGACCAG 59 NA Drosophila melanogaster 61 pav FBgn0011692 FBtr0073227 1 1 1 80 3L 4244628 4244648 AGCTAATGCATTATCTGGAGC 58 4244687 4244763 GGAAGCTGTCACATTTAATGTC 58 NA Drosophila melanogaster 61 Drs FBgn0010381 FBtr0073073 1 1 1 198 3L 3369634 3369652 TACTTGTTCGCCCTCTTCG 59 3369814 3369832 TTTAGCATCCTTCGCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sk2 FBgn0052484 FBtr0072984 1 1 1 126 3L 3048049 3048067 TAGTCAATGGACTGCTGCA 59 3048154 3048654 TATGGTTCGTTGTAACAATGGG 59 NA Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597,FBtr0072598 3 2 2 174 3L 828022 828040 GAGCTCGTATTATCCGGTC 57 827687 827885 TTTGCTGGCATCTTAGAAGG 58 NA InUTR Drosophila melanogaster 61 CG7028 FBgn0027587 FBtr0072528 2 1 1 89 3L 209076 209158 CGGAACAACGAAATAATGCAC 58 209007 209025 GTGGAAACGATCCTCTGGA 59 NA Drosophila melanogaster 61 CR41440 FBgn0084049 FBtr0111304 3 1 1 60 2R 619181 619200 GAACGACAACACAGAGAAGG 58 619222 619241 TACGATCCTGGTTGAAGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33368 FBgn0053368 FBtr0086360 1 1 1 60 2R 15648190 15648208 ATACATCGGTTCTCGTCCG 59 15648148 15648166 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33412 FBgn0053412 FBtr0086404 1 1 1 60 2R 15631960 15631978 ATACATCGGTTCTCGTCCG 59 15631918 15631936 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 ken FBgn0011236 FBtr0072129 1 1 1 91 2R 19762610 19762685 TTGATAAGGAACCTGCTGGA 58 19762737 19762757 AGGAACTTAAAGTAGGTGGCA 59 NA Drosophila melanogaster 61 IM18 FBgn0067903 FBtr0091694 2 1 1 60 2R 19489220 19489244 CCCAATAATCAGATCTATTCTCAGC 59 19489131 19489205 AACCAGATAACTTCTGATGGTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Gr59c FBgn0041235 FBtr0071977 1 1 1 81 2R 18990273 18990291 CGAACTATTCCGAGTGCTG 58 18990147 18990228 GAAGTTCTCAAAGGCTGCC 59 NA Drosophila melanogaster 61 CG11073 FBgn0034693 FBtr0300693 1 1 2 94 2R 17982092 17982111 CGTTCAGTTTGAGATACCCA 57 17980211 17982035 TCGGCGTGTTATCAATGTG 58 NA Drosophila melanogaster 61 CG15676 FBgn0034651 FBtr0071668 2 1 1 60 2R 17559507 17559527 AATCCTGACAAGGAAGTTCAC 58 17559548 17559567 TCACCCATCTGAATACTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350,FBtr0071604,FBtr0071602,FBtr0071603 3 4 4 103 2R 17212594 17212612 GTCCTCACTAGTCAGTGGC 59 17212676 17212915 GAACTTGAGATTGCGTATTCGT 59 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 2 3 3 115 2R 17068988 17069007 AAATGTTCTCCATGTGCGAG 59 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 cpa FBgn0034577 FBtr0071532 1 1 1 101 2R 16945755 16945894 CACAACGATCTGGGAAACG 59 16945959 16945977 CTCTACGTCCTGGTAGTCG 58 NA Drosophila melanogaster 61 CG11788 FBgn0034495 FBtr0086277 3 1 1 95 2R 16163346 16163364 ACTGCCCACCAATATAAGC 57 16163421 16163499 GTAAAGCACTCTATGTACGGT 57 NA Drosophila melanogaster 61 sano FBgn0034408 FBtr0086567,FBtr0086569,FBtr0290300,FBtr0086566,FBtr0086568 3 5 5 96 2R 14843623 14843771 CATCGTGAGACTCGTTCAC 58 14843831 14843849 TATCCTGTCGATCTCCACG 58 NA Drosophila melanogaster 61 UbcD10 FBgn0026316 FBtr0089553 3 1 1 60 2R 13676365 13676385 TACCATCCAAACATCGATGAG 58 13676325 13676345 AGTTCTCCGTACTGATAATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cato FBgn0024249 FBtr0087183 3 1 1 60 2R 12165493 12165511 GATTGAATGCGGCTTTCGA 59 12165451 12165469 TTCTGGTCAATGGACGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 3 2 3 104 2R 9928271 9943272 CCCATGGTATTCAGGTGTC 57 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 CG13349 FBgn0033886 FBtr0087611,FBtr0114495,FBtr0087610 2 3 5 74 2R 9846750 9846768 CAATGTGAACTCGCAGGTC 59 9846589 9846712 ATATTCAGGGATCGTCCGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 3 5 5 150 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426351 9426485 GCGGCCATCTTTAAAGGTC 59 NA Drosophila melanogaster 61 CG4734 FBgn0033826 FBtr0087754 3 1 1 80 2R 9185213 9185303 GATACTAAGACTCTAACCATTCGC 59 9185156 9185174 CTCATCGGTCATCAAGGTG 58 NA Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 1 2 2 63 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108847 9108866 GGATACTGTGGGATAGAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG34021 FBgn0054021 FBtr0100076 1 1 1 100 2R 8224700 8224721 CAAAGCCATCGAATATCTACCA 58 8224850 8224869 TTCCAACCACTTAAGTTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Cyp12d1-d FBgn0053503 FBtr0089418 1 1 1 89 2R 7012516 7012535 CATCTTTATGCAACCCAGGG 59 7012382 7012464 CGGATTTCCTTAATGCGCT 58 NA Nonspecific Drosophila melanogaster 61 CG33474 FBgn0053474 FBtr0088260 3 1 1 60 2R 6309928 6309946 AACTGCACGACTATGAACC 57 6309969 6309988 ACCGTATTTGACATCACCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11866 FBgn0033486 FBtr0088423 3 1 1 82 2R 6007481 6007559 CTACAACTAAGCGACCCAC 58 6007605 6007623 CACCATATGGTTCTGAGGC 58 NA Drosophila melanogaster 61 U2A FBgn0033210 FBtr0088941 1 1 1 60 2R 3563632 3563653 AAGATTCCACAAATCGAGAACC 59 3563593 3563614 ACAAGTCGATGGTATCAAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 3 3 3 99 2R 2884360 2884441 CATGTCCATGACGTACTCG 58 2884503 2884522 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 3 1 1 60 2R 2837258 2837329 GGTATTTGGTCAAGTCTATCGC 59 2837348 2837368 GGCCGTAAACATAGTCTTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3287 FBgn0028954 FBtr0086157,FBtr0086158 3 2 2 89 2R 2699508 2699526 CGACCATGAGAACTGTGAG 58 2699578 2700294 ATTATCGTTTGCACATTGGG 57 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114362 1 1 5 100 2R 2391114 2391132 ACAACTGGAGGAGAACGTG 59 2391191 2415537 CAGGCAGAAGTATCTATTTACCTG 58 NA InUTR Drosophila melanogaster 61 CG11211 FBgn0033067 FBtr0086005 3 1 1 80 2R 2068748 2068819 CAGGAAAGAACGGATATTTGG 57 2068688 2068706 CAGGTCCAGAAATAGCTCC 57 NA Drosophila melanogaster 61 CG8343 FBgn0040502 FBtr0085988 2 1 1 60 2R 2067466 2067485 CGCTCGTAAGCATTACATCC 59 2067507 2067526 TAGTTGAAGAGGAAGTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Act42A FBgn0000043 FBtr0086029 1 1 1 88 2R 1903099 1903121 GCGGATAACTAGAAACTACTCCT 59 1902879 1902897 TAAAGCTGCAACCTCTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 2 3 3 80 2R 1195091 1195109 AATCCGAATTCAACAGGCA 57 1195152 1203787 CAACTCGAGTAAACCGACTG 58 NA Drosophila melanogaster 61 CG40282 FBgn0039979 FBtr0111272 2 1 1 68 2R 618661 619010 AATTCAAATCTGCTGGCCA 58 618611 618629 GTCCTTGCCGTTGATTTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11629 FBgn0032965 FBtr0085950 2 1 1 60 2L 21896965 21896985 AGATGATGCAGAAAGCTAAGG 58 21896925 21896944 TCGTCACCTGTTGAGATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 2 2 2 84 2L 21638047 21638068 AGTGGCAGTTTGATGTTTACTC 59 21638113 21638244 GAAATGTGAACGCGTCCAG 59 NA Drosophila melanogaster 61 CG31626 FBgn0051626 FBtr0081485 3 1 2 118 2L 21233891 21236651 TTAATTATCCGCCTCTGGGT 58 21233792 21233810 TGCTGGATATCCGTCTTCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 3 2 2 105 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054952 20054970 TCCGGAATTTCGTACTGCT 59 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173,FBtr0081304 3 2 2 135 2L 19971507 19971525 ATGATGAACCAGGATCCCA 58 19971302 19971408 GATAGTGTTGCTGGACCTG 57 NA Drosophila melanogaster 61 CG9987 FBgn0032781 FBtr0081205 1 1 1 85 2L 19432001 19432019 TACGTGCTAACTGGAACGG 60 19432128 19432146 TTGGCTCGAGATAGTGCAC 60 NA DesignNoJunction Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0080922 3 1 2 259 2L 16870996 16877515 TGAAGCTGACATCCTAAAGGA 58 16877733 16877754 GCAGAGTATCCTTATGGAATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mdy FBgn0004797 FBtr0080916,FBtr0080918,FBtr0080915,FBtr0080917 3 4 4 85 2L 16820585 16820603 TTCTGGACTGGTGAACTGG 59 16820646 16820728 GAATGCCATACTTTAGGAGATTCTC 59 NA Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 1 1 1 61 2L 15616050 15616123 GATGAAGAACATCGTAACCAC 57 15616009 15616027 AGGCATGAAATGGATTCGA 57 NA DesignNoJunction Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 1 4 4 80 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065387 15065405 TCAATAGCCTCCTTGACCG 59 NA Drosophila melanogaster 61 CG18284 FBgn0043825 FBtr0300805 3 1 1 80 2L 10644137 10644352 AATCACAGATTCAGAGTCAAGG 58 10644393 10644411 AACATGACCTTGGTTCAGG 57 NA Drosophila melanogaster 61 nmd FBgn0005322 FBtr0080065 1 1 1 83 2L 10303593 10303667 AGCAGCTTAAGAGGCTAGC 59 10303528 10303547 GTGACGCAATCATAAGCTCG 59 NA Drosophila melanogaster 61 Mob3 FBgn0259482 FBtr0079983 1 1 1 80 2L 10266043 10266064 CATTGAGCATTTAATGGACTGG 58 10266105 10266210 GGAAATGGAACATCCGTGG 59 NA Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 3 2 2 98 2L 9962388 9962406 TGCTACTCAACGTACTGGT 58 9962050 9962327 TGAGGAAATTCTGAAGCAGG 57 NA Drosophila melanogaster 61 CG13113 FBgn0032126 FBtr0079832 3 1 1 60 2L 9544635 9544654 ATCGCTGGGAGAAACTAAGG 59 9544677 9544695 GTTTCCTTGTGGTCACGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 3 4 5 90 2L 9272526 9272544 GGGACGCATTAAAGAAGCA 58 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 CG13992 FBgn0031756 FBtr0079237 2 1 1 60 2L 5966411 5966430 AATCAATACCCAGAGGCTCC 59 5966370 5966388 GGGAATAGGTTGGAGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vm26Ac FBgn0086266 FBtr0079240 3 1 1 60 2L 5958427 5958446 ATGCGTATCTGAACCGTAGG 59 5958386 5958405 TTCTCCACGATTACCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS2 FBgn0031639 FBtr0077408 1 1 1 148 2L 4850278 4850353 AATCGTTTGCCAACCTACC 58 4850148 4850166 TTGGAAGTAGTCCGGATGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15635 FBgn0031617 FBtr0300354 3 1 1 60 2L 4646252 4646273 CTCCTAATTCTGTATTGCCACC 59 4646292 4646312 CCAATTTGAATCGGTGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31952 FBgn0051952 FBtr0077591 1 1 1 73 2L 3417263 3417281 AATTGCTGTCAGGGATTCG 58 3417318 3417336 CTTTGTCCTTAGCTGCTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31926 FBgn0051926 FBtr0077931 1 1 1 60 2L 1495848 1495868 ATTGCACAAGAATCCTGAACC 59 1495889 1495908 GGAAAGGGTCTTCAATTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5397 FBgn0031327 FBtr0077920 3 1 1 139 2L 1240879 1240897 ACAAGGAACCCGTTCAGAG 59 1241077 1241098 CTCCGTTTGAACTTTATCATCG 57 NA DesignNoJunction Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 2 3 5 106 2L 835547 836563 CCATCTACAATGCAGTGGG 58 835459 835477 AAGAGCGGCATATCGATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15880 FBgn0031283 FBtr0078040 2 1 1 89 2L 817175 817254 CTTTCCCTTGGCCTACTCC 59 817104 817123 AAGTCAAAGTAGACCGTGCA 59 NA Drosophila melanogaster 61 nAcRbeta-21C FBgn0031261 FBtr0078064,FBtr0078065 1 2 2 77 2L 545496 545516 ATGGTGGTCACCTACATAGAC 59 545555 545824 TCTCCATCGGAGATTCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0113009 3 1 3 81 2L 284960 290825 CTACTGGTCGCTGATAATTCAG 58 284900 284918 GGGTGTCAGCTCATTAGTG 57 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 1 3 3 60 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823638 823656 ATCAGCCGATCTCTTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 1 3 3 84 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831772 831790 TACATGTTCTGCTCCACGT 59 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 2 2 3 81 2L 1179187 1179460 CAACAAACAGGTGCCTCAC 59 1179504 1179523 GGGTTAACTCCATCCAACGA 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 1 6 6 126 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499927 1499945 TGATTCGCATCCACTTGGA 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 1 1 1 119 2L 3388408 3388429 AAGTACTCCTGCTGAATAAGAC 57 3388248 3388269 CGATATTTAACTCCGCAGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 1 5 11 178 2L 3626210 3626348 AAGCAGAGAAGGATGGACG 59 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 1 4 11 179 2L 3626210 3634250 ATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 1 1 1 100 2L 3670473 3670491 TTTCTTGCACTAGCTCACG 58 3670326 3670344 GGTGCAAACGTGTATCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 3 3 3 165 2L 3870399 3870417 CAACAACCTGAACTGCCAG 59 3870544 3870631 GCCGAGTTGTTCGATATACTC 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 4 5 111 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 2 4 5 112 2L 4473964 4474340 TAGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 3 4 4 67 2L 4904926 4904944 CTGCCCTCCATCTTATCCA 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 3 2 2 80 2L 4935313 4935332 CTTTGGATTTCTGACTGTGC 57 4935175 4935272 GGAAGTATATCCTGGAACACC 57 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 2 11 11 97 2L 4994704 4994794 CCCTTTAAGGATTACCTGGAG 57 4994627 4994648 GAGATGAAGCCATTGATATGTG 57 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301538 2 1 11 86 2L 5004200 5008191 ATACGGATTGGATGCCTGG 59 4994955 4994973 CCGGATTTCTTCACATCGC 59 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004 3 1 2 148 2L 5039893 5039911 AACCTACAGGATCGCTGTC 59 5040023 5040133 TCCAGCTGATTCACCTGAC 59 NA Nonspecific Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 3 4 4 95 2L 5976673 5976693 GTACATTTACCTTTCCGGCAC 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0290297 1 1 3 81 2L 6091789 6093004 AAATCACGCATTCAGCCAC 59 6093048 6093067 GCCTGACTAGATTGTTCCGT 59 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 3 2 2 88 2L 6097245 6097321 GTCCCAAAGACGTACAATCC 58 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 1 2 3 81 2L 6110157 6110175 ATTAGTACGCGACTCGGTG 59 6110220 6113043 AGATCTTCTTGACACCGCT 58 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 1 2 2 80 2L 6652373 6652394 CTCAAGAAGCAACTTGAATCTG 58 6652432 6652505 ATCCAGATCCCTTTCTAATGAG 57 NA Drosophila melanogaster 61 Nhe3 FBgn0028703 FBtr0273248 1 1 4 99 2L 6680534 6680956 AGTGCACAGTTCTGATGGT 59 6680453 6680472 CGTGTCCAAGTTCGTATCTG 58 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0079386 2 1 3 80 2L 6767032 6767267 CTGCACAAAGCTAATGCTC 57 6766970 6766989 CTGTATGCTCTCATCCAGAG 57 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079376 1 1 3 81 2L 6801841 6802252 GCTGTAATGAGCTTTATGCC 57 6801779 6801797 ATCCTACCTCTACGCTCAC 58 NA Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 3 1 1 76 2L 6960452 6960470 GCACCAATTCGCTCTATCC 58 6960569 6960587 ACAATTCGCACCTGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112611 2 1 3 81 2L 7155534 7155552 AAAGAACTACTGGCGATGC 58 7118908 7155489 TCTTTGCAGCACTTACCTC 57 NA Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 1 2 2 89 2L 7196230 7196325 GACAAGATCACAAGGTGGC 58 7196159 7196177 ATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 3 4 5 84 2L 9535897 9536002 CTATATCGATCACTCCCGGC 59 9536049 9536067 ACCACCAGCAGAATGACTC 59 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 2 2 2 134 2L 9733521 9742382 TATCAATGACACGCACAACG 59 9733406 9733427 GCCACAAACATATAGATCACCC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300871,FBtr0290197,FBtr0300870 2 3 9 81 2L 9905924 9905942 CAACGTACCTGGCAATCAG 58 9905070 9905881 ACTGTAGTTTAGCTTGGGAGG 59 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 2 2 2 136 2L 9940470 9940488 CTAACCGCAGAACAGACTC 58 9940648 9940666 AGTTCCTTTGCATTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 1 5 6 80 2L 10399673 10399772 ACAGGTATTGTAAATGTCGCG 59 10399813 10399832 ACTTGAACCATTTGTACCCG 58 NA Drosophila melanogaster 61 CG17124 FBgn0032297 FBtr0080118,FBtr0080117 3 2 2 71 2L 10745704 10745794 CTTCGATCCACCAAACGAG 58 10745651 10745673 CTTATGTCATCTGTGTCCATGTC 59 NA DesignRelaxed Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 1 3 3 167 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300404,FBtr0300403,FBtr0300400 1 3 5 80 2L 10990712 10990730 TGTGGACAATAGTCCGGAC 59 10990772 10991067 CGTTCCGAGAGTATGTTATCC 58 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080347,FBtr0080344,FBtr0300567 2 4 5 141 2L 12299268 12299287 ATGACCGTCCAGAATCTAGC 59 12299391 12304460 GATTCGGATCGGACCAGAG 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 2 3 17 88 2L 12731058 12737971 ATCTTTATGGTTCTGGCTACCA 59 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 3 1 1 70 2L 13257092 13257110 GATGATTTGCGCTGGTCAG 59 13257201 13257219 CATTGATGACCATGGGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514 2 1 2 194 2L 13547154 13547762 CCTTTGCTCAGACGAAGTG 58 13546978 13546996 TGTATCTGTGAGTGCTGCT 58 NA InUTR Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 2 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068916 14068939 GGACGTTCTAGTGTATTATAGGGA 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 2 3 9 111 2L 15261795 15261814 AATCTACGACGAATCCTCGA 58 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112943 3 1 3 196 2L 15650400 15650509 GAAGTGGATGTCGGTTCGA 59 15650222 15650241 CATCAGTTACCATGGCATCG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 3 4 5 161 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737811 15737831 ATCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 2 4 5 81 2L 15760338 15760416 CGATCCGGATTACAGAACCT 59 15760276 15760295 TGGATAGTTGGCTCCATAGC 59 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080846,FBtr0080847 2 4 4 200 2L 16314850 16322969 AACTACGATGGAGAACGCT 58 16314607 16314625 TTCCAGGTTCAGCTTCTCG 59 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 2 3 4 80 2L 16692113 16696593 TCGATCGAATAGAACCAGACG 59 16696635 16696653 AATTGAGTCCGGACAGGAG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 2 4 16 104 2L 16777431 16778401 CAAGATGCGCTATCAAATCCT 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 3 2 2 81 2L 17383512 17383530 AAGCTGAAGGACTTTCCCA 58 17374728 17383472 CAAATCTATTCCGGGAAAGATCTG 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 CG15141 FBgn0032635 FBtr0080979 3 1 1 120 2L 17411529 17411547 GTGAATCTCAGCCAGACGA 59 17412807 17412825 TTTCGCCAGTCATTTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232 3 1 4 157 2L 19183446 19183523 AATAGGCCAAATCTGCCCT 59 19183254 19183272 GTACACAGCAGAGTTCCAC 58 NA InUTR Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 3 2 2 86 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891875 19891896 AGATTCTTGTCGTACTTCTTGC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 3 2 3 111 2L 20061916 20061934 CAGGCCTCCAATATCTGGA 58 20062009 20062162 CGTCGTTGTTGAGATCCAG 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081352 1 2 5 172 2L 20345252 20345535 CCTGGAATCCTACGACCTG 59 20345906 20345924 CAGGACTTCTCTTAGGCGT 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081354,FBtr0301884 2 2 5 195 2L 20336392 20336472 GTCCTGAACAATGCAGGTG 59 20339325 20339344 AGGGTGTCAGCTCATATTCG 59 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512 1 1 3 87 2L 21312193 21318132 GACCTGAAAGATGAAGAATGTC 57 21318180 21318198 TAATGTTCGGCTGAAAGCT 57 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 2 4 4 81 2R 705342 705360 TATATGCTGTCTGCGGGAC 59 705225 705299 CAAACGTCAATCTTTAGCCCA 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086012 1 1 6 93 2R 1982573 2018587 CTATATCGACGCATATGGTCG 58 1982500 1982518 CTTGCTCTTCTTCGCATCG 59 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 3 2 2 132 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579725 2579804 TTGTAAGCCATCTATAGTATCCGG 59 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 3 1 1 79 2R 3167616 3167634 CTGCTCTCGAGCATAAAGG 58 3167740 3167758 TTCACTGGACTCTGAAGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111098 1 2 59 88 2R 3219876 3221901 AAGTGAAGGTACCTCCCAG 58 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111052 1 1 59 80 2R 3236476 3242403 CCAGTACCCTTCTTTAGATGGT 59 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111063,FBtr0089016,FBtr0111061,FBtr0111065,FBtr0111101,FBtr0111071,FBtr0089019,FBtr0111074,FBtr0089018 1 10 59 81 2R 3219872 3229220 AGTTAATGTACCTCCCAGATGG 59 3219812 3219830 CTTGCATTCAACCTTGGCA 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 2 5 8 108 2R 3355322 3356623 ACTATGCCGTTGATGTGCT 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 1 5 5 80 2R 3371064 3371167 GGACTTTATGTGGGATATCGAG 58 3371005 3371023 CAAGTGCGATCTTTCTCGT 58 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 3 3 3 209 2R 3414715 3414733 CACTTTGCCACAACTGGAG 59 3414457 3414475 CAGACTCCTGGAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 1 3 3 80 2R 3490154 3490638 TTGGATAAAGTGGGTCTTCG 57 3490093 3490111 CGAGAAGACCTTGATCCAG 57 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 3 2 3 119 2R 3593013 3593031 TAAACACAGACTTGGTGGC 58 3592854 3592932 TCCACTTTACTGTTTAGACCG 57 NA Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 3 1 1 62 2R 3828675 3828694 CTATACGCATGGGATTCGTC 58 3828770 3828788 ACGTGAACAGTAATTGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 Cul-4 FBgn0033260 FBtr0301355,FBtr0088821 2 2 2 84 2R 3992948 3993037 CTTTAAGGATAAGCCTACACTGC 59 3992886 3992904 GAGTTGGATGGCGATAACG 58 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290278,FBtr0290279 3 2 2 274 2R 4838430 4838448 CCGAGCACTAAAGTTCCCA 59 4838055 4838073 CACTCCAGACACTCGTCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 babo FBgn0011300 FBtr0088659 3 1 3 91 2R 4842347 4843226 TCAGCTACAGTTGCATGGT 59 4843278 4843299 CCTATACGTATCGAACCTTTCG 58 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598 2 1 2 80 2R 5048396 5048417 ACAGTGATATTCCACTACAACG 58 5048269 5048356 CTCAATGGCATTGATTTCCG 57 NA Drosophila melanogaster 61 CG1902 FBgn0033434 FBtr0088532,FBtr0088531 1 2 2 80 2R 5491678 5491760 CGTTCAGGAATATTCGCCA 58 5491804 5491822 AATGTGACCCATTCGTGTG 58 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 2 2 2 222 2R 5703110 5703128 TATTTGCGCAGGATCAACG 59 5703366 5703384 TGATGTACTGGAAGCGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 3 2 4 113 2R 5782187 5782265 CCGAAGAGAAACCAATAGCTG 59 5782339 5782358 ACAGCTCTAAGGATACAGGG 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 1 3 5 83 2R 5884116 5885216 GCTAGCATTCCTCGATGTC 58 5884051 5884069 TCGTAGTCGTCAATGTTGC 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112901 2 1 5 93 2R 5884714 5885216 GCTAGCATTCCTAGACACAG 57 5884640 5884661 GAACATTTGCTCATAGATCACG 58 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 1 2 2 105 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009869 6009887 GTGTCAATTTCCACCTGGC 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 1 16 17 80 2R 6192538 6192559 GATTGATGCCAACTGGTATGAG 59 6192597 6192987 CGACTGACAATCTCAACATAGC 59 NA Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 1 1 1 211 2R 6308280 6308298 GTTGGATGTTTGACAGCCG 59 6308029 6308052 CTACCATTTCTGATTCGATGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 2 2 4 140 2R 6359166 6359186 ACAAGTGTTTCACTGTCTGTG 59 6358238 6358721 TACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0113065 2 1 2 83 2R 6792308 6792326 GGAATCATCGGCTATTGGC 58 6792368 6792560 CAGAGGATAAATTTCATCCTGTGG 59 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 3 3 3 131 2R 7108118 7108443 ACACTATCAGCATCGTTGAG 57 7108536 7108555 GGTTCAGGCTCATCTTATCC 57 NA DesignRelaxed Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 2 3 3 131 2R 7108118 7108443 ACACTATCAGCATCGTTGAG 57 7108536 7108555 GGTTCAGGCTCATCTTATCC 57 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 3 4 5 80 2R 7199277 7199300 CAGCCATTATCCTGTTAATGATCC 59 7199168 7199239 TGGATTTCCAGTAGCGTCTG 59 NA Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 2 2 2 120 2R 7949116 7949134 TACACCTGGATTGCGATGG 59 7949218 7949339 TTGTAGTCACTGGGATCGC 59 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 2 1 3 265 2R 8225479 8225497 GGAGTGTCCAAAGAACGGA 59 8226215 8226235 TAGTAGAAGCTCAGGATCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 1 1 1 70 2R 8282206 8282224 ATCATATCCCTCGACACCT 57 8282316 8282334 GTTTGTCGTATAACCGCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 3 3 6 124 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548586 8548604 AGAAGAGGGTTAGCACCAG 58 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 1 6 6 80 2R 8765938 8765958 AAGAACTTCTCGTTTGACGAC 59 8765815 8765902 GATTAGTTGTCCCATTAGAATCAGG 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 2 5 5 150 2R 9426600 9426618 AGTCAGCCGTCTTAGAGGA 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 3 2 2 81 2R 10057017 10057084 CCTTCTACATGATAAAGGCCC 58 10057126 10057145 ATCGAAGTATGCTTGTGCTG 58 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523 1 1 2 80 2R 10056545 10056563 TCCTTGCTTTGGAGAAGGG 59 10056603 10056908 TCGAATATACACTTAGCCTGACC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089617,FBtr0089620,FBtr0089618,FBtr0089621 1 4 7 80 2R 10491537 10491555 ATAAACACAAGCGATCGGC 59 10490993 10491493 AATCGTAGTCAGACCTGCG 59 NA Nonspecific Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0112809,FBtr0087465,FBtr0112810 1 3 4 80 2R 10663088 10663109 AGGTGACGCTATCCTATAAGAG 58 10662961 10663047 GTTCGTTGAGAGCTGAGAC 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110996,FBtr0110997,FBtr0087426 2 3 6 81 2R 10849115 10849136 GAATATCTCATACGAGGAGCTG 58 10848994 10849075 CCATTTGATGGTAAATGGCTG 58 NA Drosophila melanogaster 61 CG34187 FBgn0085216 FBtr0112380 1 1 1 113 2R 11182518 11182536 TTCCTGTTCTGGTTCACCC 59 11180980 11180998 CTGGACATGGTTCGATGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 2 4 13 80 2R 11846816 11847306 TCGTACTTCAGAGATCCACC 58 11846755 11846773 CGACAACGAGATGTGAGTG 58 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 1 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0087079 2 1 4 80 2R 12646327 12646767 GAGAAGTTACGCTATCGCC 58 12646265 12646283 CGTATCGAACAGCATGGAC 58 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0112819 1 1 3 106 2R 12824025 12827605 CAAGTGTCGAGCATGTGAC 59 12827674 12827693 TCTCCAGATAAATGCGACCC 59 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0086822,FBtr0086823 2 2 4 82 2R 13755839 13755857 AGGAGGTGCAATCTGATGG 59 13755048 13755794 GTCATCTTCGTCGGAAACTC 58 NA Drosophila melanogaster 61 CG42518 FBgn0260392 FBtr0300663,FBtr0300662 1 2 2 80 2R 14055629 14055716 GCCAGAGCGTTTCAAATCC 59 14055758 14055778 TTAAGCTCCTTCTTCACTCCC 59 NA Nonspecific Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 3 2 2 87 2R 14659388 14659472 CAAATTCAGATTGGGCAATGAG 58 14659520 14659538 ATCAAACAGGTGCAAGTCG 58 NA Drosophila melanogaster 61 hppy FBgn0034421 FBtr0086504 1 1 2 81 2R 15105666 15105686 GATCTTCTAGTCCCGAAACGT 59 15108277 15110753 AAGGTCGCTCTTAGCTTCAG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 2 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286541 ATCCTGGAACTCTTTACTGC 57 NA Drosophila melanogaster 61 Elongin-C FBgn0023211 FBtr0086541,FBtr0086540 2 2 2 80 2R 15332875 15333441 GGAGATACCATCCCACGTC 59 15332813 15332833 ATTTCGGTAGAACTGTTGGTG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 1 11 19 81 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0086460,FBtr0100392,FBtr0086457 1 14 19 104 2R 15365202 15366258 TCACTCTGGTCAAACCAGAG 59 15366325 15366343 GAGAAGAAGCTCATGCGAC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 3 5 19 97 2R 15361384 15361402 ACAAGTGGCATCATTCCAC 58 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 2 3 3 81 2R 15554183 15554202 ATCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071602,FBtr0071603 2 2 4 84 2R 17222090 17224945 GTAATCAGGTCTGGATATCGC 58 17225052 17225070 TCGTTATCGTTGTCTTGCG 58 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 3 2 6 127 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286078 17286689 TGTATGAGCTGTGTTTATGCC 58 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 3 2 2 88 2R 17424022 17424098 CGTAAATCATCGATTCATCCTG 57 17423897 17423915 TTAAGCTGTTGAACTCGCC 58 NA Drosophila melanogaster 61 HmgD FBgn0004362 FBtr0301410,FBtr0071708,FBtr0071709 1 3 3 157 2R 17603114 17603206 GACAAGTCTGAGTGGGAGG 59 17603327 17603345 TTCTTGCTCTTCTTCGCCA 59 NA Nonspecific Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 3 2 2 80 2R 17709902 17709987 CAATCGTGAGATCTTCCCTG 58 17709841 17709859 GGATCCGATTCACAACTGG 58 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299556 1 1 5 80 2R 17954775 17955938 CGGATATCGACAAGCAACTG 59 17955980 17955999 CCTCGGGATCGTTATTTGGA 59 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 1 2 2 80 2R 18075289 18075365 GAACATGAACAACATCTCCCA 58 18075404 18075425 TTGTAGAAGTCGATACAGATGC 58 NA Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 1 2 2 188 2R 18299367 18299386 CGAGGAACTATTTGAGGCTG 58 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 2 2 8 80 2R 18624163 18624181 CTCTGGGTAGAGATCCAGG 58 18621693 18624119 GTCATGAACCTGCATTCCC 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 3 4 13 85 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817835 18817922 TCTTCCAGCAACTCATTGC 58 NA Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 2 1 1 139 2R 18926491 18926509 GATCTGAGCTTACGTTCGC 58 18924323 18924341 ATTGTACGATGTTGGGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9875 FBgn0034850 FBtr0072006,FBtr0301853 1 2 2 99 2R 19245611 19245629 CCAGAAGACTCTGGACCAC 59 19245692 19245771 GTCTGCAGTCTTGTTCAGG 58 NA Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 1 4 4 111 2R 19275104 19275122 CACCTTCGACAACAGAAGC 59 19275256 19275274 TTAGTCTGTACCTGGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111 3 1 2 183 2R 19310077 19313372 ACAAACGAGATAATCATCACCG 59 19309752 19309770 GGTACAGCACCATGTTCTG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 1 3 3 80 2R 19616740 19618435 TACTACTTGGCCATAATTGCTG 58 19618474 19618494 CTGGTTGATGAACTCCTTCTC 58 NA Drosophila melanogaster 61 CG11299 FBgn0034897 FBtr0113114,FBtr0113113,FBtr0072087 3 3 3 81 2R 19619428 19619446 AGAGCATCAACACGTTTCG 58 19619490 19619574 ACATCGTTGTACAATCCGTC 58 NA Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072154 2 1 3 110 2R 19858073 19858092 CAGTTTCCTGTACAGGAGTG 58 19858222 19858242 GCGTGTTTGGTATTACTTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165 1 1 2 184 2R 19958352 19958370 TTTCTCTAGCGAGCTTGTC 57 19958517 19960236 TTGGCCAATCAAAGAGTAGG 57 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 3 6 6 90 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064348 20064427 GCTTAACTTGCGTTTGCTG 58 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 2 2 2 85 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299757 20299775 GCAGAACGATTGACCTCAC 58 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 3 4 4 91 2R 20419982 20420000 AATCCGAAACCATGTCCGA 59 20420052 20420129 TTGTCGTATGAAGTTGATGAGG 58 NA InUTR Drosophila melanogaster 61 Nurf-38 FBgn0016687 FBtr0072343,FBtr0273253 1 2 2 80 2R 20447024 20447042 GGAGGCCGAGAAGATACTG 59 20446640 20446980 AAATGCCAAGTGTCGACTG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302575 3 1 8 82 2R 20879380 20879399 GCGAGGACATGATTGAATCG 59 20879206 20879335 GGCTACTTGTATGGAGCGT 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 3 2 6 82 3L 161364 167487 TCAAATCGAAACTTTACGCC 57 167530 167550 AATATCACCCTTCTTGAAGGG 57 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910 2 1 6 80 3L 982230 982248 TGCATCTCTATGGTCTGGG 58 982289 983846 AACCAAAGAACTCCTTGATCAG 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 2 2 3 60 3L 1254277 1254296 ACTGCAAGTTCAAGATCACC 58 1254319 1254410 CAGTCGTCCACATTCTCGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 2 4 4 81 3L 1326067 1326085 CCTCGAGAACTACCAGAGC 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 3 2 2 146 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341730 1341749 TACCTTAGTCTTCTTGGCGG 59 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 3 6 6 105 3L 1520670 1520688 ACCTTTGTGCTAGTGGACC 59 1520757 1521145 TTACCAGATTGCCGAACCA 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0113123,FBtr0072807,FBtr0072806,FBtr0100219 1 4 5 63 3L 1664552 1664570 CAAGTGCCTGGAATTGGAG 58 1663997 1664015 CGACTTAATTTCCTCCGGG 58 NA DesignNoJunction Drosophila melanogaster 61 GV1 FBgn0027790 FBtr0072784 1 1 2 80 3L 1822028 1822047 GCAAATACAATGCGAAGACC 58 1822090 1822403 ACTGCTGCAAATAGTTCCA 57 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072856 3 1 3 121 3L 1945586 1945663 GTCAAAGTTGCATCAGATTCGA 59 1945486 1945504 ATCGACTCCTCATTGGGAC 58 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 3 2 2 107 3L 2154402 2154491 GGGAAGCATTGAGGATTGG 58 2154313 2154332 GCTGTTTGAAAGGATGAGGA 58 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 2 4 4 71 3L 2253685 2253789 CTGTATGGCAACTCCATTCTG 59 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 1 7 12 91 3L 2461187 2461205 GAGGTGTCTTCAAGTGCAG 58 2461260 2463066 GATGAGGGTTCGAATTCCG 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072957,FBtr0072956 1 2 5 133 3L 2558380 2560124 AGTGAGGAGTATCAAGCGG 58 2558265 2558283 TTGCTGCTGATAATCACGC 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988 1 1 4 99 3L 3053417 3053435 AACTGGTTCTCGTATGCCC 59 3053498 3053567 TCTTCTGCATCAGAGCCTG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988 2 1 4 196 3L 3053320 3053338 CAGTGGCGAGTACTACCAC 59 3053498 3053567 TCTTCTGCATCAGAGCCTG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 3 6 15 80 3L 3083796 3085208 TCGCCACTTATATGGTCAC 57 3085252 3085270 ATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 1 3 3 80 3L 3119960 3120042 CTTGATCAATTAACCCACGC 57 3119899 3119920 CATTTCTGCCAAGGAATTACTC 57 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 3 5 5 88 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131024 3131119 TCTGGTTGAGAGTCGATATTATGG 60 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 1 3 3 108 3L 3168167 3168185 CATGATCTGTCCATCGTGC 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 1 5 5 80 3L 3310691 3310776 ATTCCTGTCTGTGAAGATGTC 57 3310818 3310836 AAAGCACCCAAGACTTCTG 58 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0300017,FBtr0073072 3 2 4 165 3L 3366081 3366101 AGCCAGGAGAATCTAGTTGTG 59 3366300 3366452 GCGGATTATCCGATTGTCTG 59 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 2 1 2 241 3L 3416817 3416836 AATTTGTACCACGGATTGCT 58 3404713 3404731 TTCTGCGATCCATGTAGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 2 7 13 128 3L 3588067 3593334 TAACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 3 2 3 256 3L 3961756 3961775 GGAACTCGCGTTCAATTCTC 59 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 2 2 2 60 3L 4034505 4034525 CAGCACATTAACATGATCACC 57 4034547 4034625 TCATAATGTGCTCCACCAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7447 FBgn0035539 FBtr0073291,FBtr0073292 1 2 2 93 3L 4402148 4402235 GCATGAAACCTATTTGCTCC 57 4402291 4402309 AAACGTCCTGTGAAACCAG 58 NA Drosophila melanogaster 61 CG13722 FBgn0035553 FBtr0073329 3 1 1 68 3L 4487526 4487544 CAGAGCTACTTTACTGCGG 58 4487419 4487437 ATACCCATCGGTGAAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 1 2 2 80 3L 4861608 4861628 TCTACAACCTGACTTATGGCT 58 4861667 4861745 GCATGTGAGATATCTTCTCCTG 58 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 2 4 4 64 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775806 5775824 ACCATATGCCATGACCCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091709 3 1 4 172 3L 5773471 5773489 TCTAATTGTGCAGCACGAG 58 5773625 5773700 AATCCAACGACCAGTTTCG 58 NA InUTR Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 2 2 2 106 3L 5798502 5798579 TGAGATCCTATGGTCGGTC 58 5798649 5798667 GAAATTCAAACCGATCCGC 57 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091475 2 1 4 148 3L 5918408 5918504 GCTGGGTACTAAATGCTGC 59 5918616 5918634 GTAGTTATCCTCGCCACCC 59 NA Drosophila melanogaster 61 mus312 FBgn0002909 FBtr0299690 2 1 2 60 3L 7324284 7324305 ATGAACCTTCTCAGATAACCAC 58 7324326 7324409 CGTTGGAAACAGTCTTCGT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 SMSr FBgn0052380 FBtr0076870 1 1 2 119 3L 7369000 7373731 CATGAGCTTAGGCTACTCGT 59 7368900 7368918 TTGTCCAGGAAGATGTCCG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089850 1 1 3 88 3L 7596576 7596773 CACTGGAGACAGAGCTGAC 59 7596825 7596843 AAGTCGAAATCGCTCTGGT 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 2 2 15 86 3L 7655387 7656366 TGAAATTGATCCGGTTGCAG 59 7655320 7655339 TCACTCTCGTCTTCAGTCTG 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 1 4 15 119 3L 7654600 7655092 ATCTCATCGCAGAAACAGG 57 7654499 7654517 CATTGGTTACTACCGTCGG 58 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076766 1 1 2 115 3L 7967277 7967416 CAAGTAGTTCAAACAGCATCAG 58 7967183 7967202 GCTACAGGAGAATTTGGTGG 58 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 1 6 6 90 3L 8040251 8040353 TCTTCGATCCGGATAAGCG 59 8040407 8040425 CACATGCACGAGTGATAGC 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 2 6 6 104 3L 8040452 8040470 GAATGCGTCAGTATACGGC 58 8040538 8040615 GCATCTCCTCTTTGACCTG 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 3 3 9 108 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350938 8350957 CAAATGATGCGGGTCATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114549 1 1 9 194 3L 8351807 8351959 ATCAGTTACGTCGTCGGTC 59 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA InUTR Drosophila melanogaster 61 Nelf-E FBgn0017430 FBtr0076650 3 1 1 108 3L 8593205 8593223 GCACCATTGTCAATGTCTC 57 8593026 8593046 ACATTCTTGCCATGAATCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6486 FBgn0035922 FBtr0273328,FBtr0076568 1 2 2 135 3L 8642731 8642817 GCTACAAGCCAACTGTACG 59 8642916 8642934 ACAATCCATCGGACCACTC 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 2 5 5 82 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986077 8986096 TGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 3 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534 3 1 3 88 3L 9151174 9154377 TGAAATCGAAAGCTTCGGC 59 9151104 9151122 AAACCTCACTCGAGACACC 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535 1 1 3 94 3L 9144596 9144677 CAAACAGTGATGGGACCCT 59 9144520 9144538 TTCACCGTATTCTCCAGCG 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 3 3 6 86 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338987 9339006 AGTTGTAGCCTATGTGGTCC 59 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435 3 2 3 86 3L 9636635 9653749 CGATAAAGAGGATGACAAGGT 57 9636569 9636587 AGTTGTTTCGACAGGAAGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 1 4 12 113 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 2 3 3 173 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687661 10687679 GCACAGTATCTCTGTCCAC 57 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 1 3 3 172 3L 10687816 10688131 TATTCCAGATTGCTGTGGG 57 10687662 10687681 CACAGTATCTCTGTCCACAG 57 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 3 4 4 80 3L 11518601 11518687 GGCAACAGAACGTACTTATGG 59 11518541 11518563 CATCACATAGTCGATGTACTGTG 59 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 1 2 3 172 3L 11730333 11730351 AAACATCTGCACTACCACG 58 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075998 1 1 2 80 3L 12145052 12145073 TTGTCCAATATTCGGATGATGG 58 12145114 12145292 AGTTGCCCTTGAACATCTG 58 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018 3 1 2 87 3L 12194929 12194949 ACCAAAGGGTTATGAAGAAGG 58 12194580 12194881 ATGATGGGTATATCAGCGGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11006 FBgn0027534 FBtr0075927,FBtr0075929,FBtr0114506,FBtr0075928 1 4 4 80 3L 12805309 12805389 GCTTTGCTCAATACGTATAAGC 58 12805429 12805448 CTCCCTTGGCTTAACATCAG 58 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 2 3 3 81 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231801 13244264 GCCGGTATAATCCTTATTTAAGTGG 59 NA InUTR Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 2 2 2 91 3L 13994647 13994667 TCGGTTACTGTACAGGTATCC 58 13994517 13994595 CATAGGGATTGCGCTTTCTG 59 NA Drosophila melanogaster 61 CG6833 FBgn0036405 FBtr0302433,FBtr0075774 1 2 2 60 3L 14045083 14045101 TGACATTCGTGATACGTCG 57 14045123 14045143 CGTGTGGGTATTAGAGATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 1 3 3 80 3L 14981281 14981299 AATCCCTCATCGTTTGGGT 59 14981342 14982960 GTATCATCGTGCCCAATTCG 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540 2 1 4 84 3L 15815227 15815246 TACTGTATCCTCGAAGCGTC 59 15815106 15815182 GACAATCTGCTTCTCATTGCT 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 3 2 7 103 3L 16068850 16069333 GTCGGAGTTCTTATGGCAG 58 16069400 16069418 ATATCGATCGCTTGTGGAG 57 NA Drosophila melanogaster 61 CG42513 FBgn0260387 FBtr0300653 3 1 2 122 3L 16496621 16497431 TCACATCCAGGTGACACAG 59 16496517 16496536 CTGCCCTTGAGAAAGTAGGT 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 1 3 3 86 3L 16485821 16485839 TTCAAGTCATCGGCCTACG 59 16485591 16485773 AATGATTGTCGTATCCCTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075342,FBtr0075341,FBtr0075343,FBtr0075344 1 4 4 86 3L 16782611 16782629 GACGAGGGTATCGAGTTCC 59 16782405 16782561 GAGGACGGCATCATACTCC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 3 2 7 116 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953720 16953739 CACATCTTCGTTAGCACGAC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075008 2 1 12 80 3L 19297391 19297475 ATCACGATGATTGCCTACCT 59 19297330 19297350 CAACAGCATAATCCCTTTCCA 58 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302714,FBtr0302713 1 2 5 123 3L 20146359 20146377 CAAGATGGGCATTATCGGC 59 20145396 20146274 AGTATTGTTAGTGTGGCTGTG 58 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 2 4 4 81 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508474 20508552 CAACCATAGCCCGAATCCA 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0302637,FBtr0299893 2 2 18 174 3L 20812560 20825954 GGAACGCGAAGAACAAGTC 59 20826088 20826110 CACCACCTTCTTAACATAGTTGG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616 3 1 4 90 3L 20958850 20959241 TGAGCTGGATAAGGCTACC 58 20958778 20958796 AGATTGTCGCAAAGCACAC 59 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 3 4 4 197 3L 21199663 21199681 CTTTGCTCCCAACTTCGAG 58 21200651 21200669 TTCAGTATTTCCGCCAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 3 3 3 127 3L 21612252 21612331 TTTCAGAAACAGCCGACCA 59 21612422 21612440 CATGGACAGTAATTGGCCG 59 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 1 2 2 71 3L 21807936 21807954 TTTACATGTGAAGGCTGCA 57 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 3 2 2 80 3L 21819504 21819584 ATTAGCAATGGGTTCAAGGTG 59 21819626 21819644 CAACAATTCCTGACCCTGG 58 NA Drosophila melanogaster 61 CG33767 FBgn0053767 FBtr0091768 3 1 1 71 3L 22639475 22639496 TGTCTCCATCATATTTGTCCAC 58 22639613 22639632 TACGTCGGACTGAAATTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 1 4 4 87 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0078565 1 1 2 80 3L 23017255 23022941 GGCGCCAGGATAAATTACAC 59 23022981 23023002 ATGGTAGATTCTCATACTCGCC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078953 2 2 4 80 3R 163313 163331 AATATGAGCAGTCGCAAGC 58 163046 163272 CTTATTAGTCGAGCGCTTTCTG 59 NA InUTR Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0078894,FBtr0078895 2 2 3 80 3R 464125 464277 GTAAGCCTACAGGCAAACC 58 464063 464083 TGGTGGACATATACTGATCCA 58 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0078840,FBtr0110958 3 2 2 86 3R 748470 748488 CTTATCGATCCAGTGCTGC 58 748535 748678 GAACAAATACCTGGTGTACTCC 58 NA Drosophila melanogaster 61 cno FBgn0259212 FBtr0299709 1 1 3 80 3R 1008596 1011099 CTACGAAAGATATCGAGCGTC 58 1008536 1008555 AGGAACATGGTTAGCTTGTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110933 2 1 19 91 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119471 1119789 AGTAATGGGCGAGCTTGAG 59 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0078785 2 1 2 158 3R 1181842 1182158 AACGAAGATGATGAACCAACG 59 1182278 1182296 TAGCATGGTATGCCTGTCG 59 NA Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 1 3 3 85 3R 1205150 1205228 GGACCAACTAATAGATAAGCATGC 59 1205088 1205106 AGTCATTGTCGTAGTCGCC 59 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078742 2 1 2 171 3R 1435512 1435530 ATAACTTCCACGTGTTCGG 57 1434729 1435377 TTCACCATGCCAACATAGG 57 NA Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 2 3 3 84 3R 1468678 1468755 CATCACACTGTTTCACGCA 59 1468612 1468630 AGTGGAAGGAACTAGCGAC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 2 3 12 92 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586601 1586620 TTCTTGCTGTTTAGGGATCG 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 1 2 12 80 3R 1586682 1587380 CAAATTCGGACATAACTGGCA 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 2 4 4 134 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644079 1644097 ATATCTTGCGTTTGGTGGT 57 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 3 2 2 80 3R 1699264 1701810 TCGATCTATCAGATCTGATGCC 59 1699205 1699223 GATTGACGCTGTAGACGAC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 3 4 4 91 3R 2184950 2184968 TGTCCTCAGCATTTCAGGA 58 2185021 2185112 GAAGGGATGCTTTAGCAAGTC 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 1 4 4 80 3R 2536679 2537242 TGATCAGTCCGATAGTAACTCC 59 2536620 2536640 GTGGAATCGGGTATATCATCG 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 2 8 9 90 3R 2926913 2926936 GAAGATCAGCTATGAGAAACAGAC 59 2925232 2926864 CAGATCAAGCGTTCTGCTG 59 NA Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 2 1 1 72 3R 3244777 3244795 CTTATGGAGGCTGCTACCC 59 3245125 3245143 GACAATTGGCTTCATCGCT 58 NA DesignNoJunction Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551 2 1 2 147 3R 3346299 3346903 AAGAAGATATGATGAAGACCGC 58 3346111 3346129 TTGGGAATGAAAGGTGTGC 58 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0081817 2 2 4 80 3R 3848385 3848408 CATGGTGATGATTCGATCATACTG 59 3848200 3848346 ATTGGGCTCCATCTGATCC 59 NA Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 3 2 2 77 3R 4171064 4171083 GATTCCTGTTCTTAGGGCGA 59 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 2 4 8 80 3R 4661221 4664122 GAGTCTAAGCCAGTAGAATCC 57 4661161 4661179 GGGACTTGATGCATACGAG 58 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996 1 1 2 160 3R 4869351 4876093 TTCACAAGCAACATGGCTC 59 4869209 4869227 ACATACTTCTCGCTAGCCG 59 NA Drosophila melanogaster 61 Nmdmc FBgn0010222 FBtr0081996,FBtr0081997 3 2 2 134 3R 4868681 4868699 GAAAGCCGGGTTTGATCAC 59 4868498 4868584 GGCGAACTTCTTCAAAGTCC 59 NA Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133 1 1 2 92 3R 5081518 5081593 AATTTAGCGACTCCAAGGAC 58 5081645 5081666 CAATTGAGTCCATGTTGTAGAC 57 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 3 5 14 97 3R 5258549 5269739 CATTTCAGTTCCGGTGAGTC 59 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 3 2 2 97 3R 5320656 5320736 GTGGAGGAGAATCCTCACAC 59 5320796 5320814 CTTGTATCGACCTCCTCCG 59 NA Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 1 1 1 92 3R 6533585 6533603 CAAATGTCCGAGTTGCCAC 59 6533440 6533458 ACTCATGCATCCTTCTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082314 2 1 2 98 3R 6579825 6579843 TAACATCACGGTAGCTGGA 58 6579571 6579764 AGGAACACCTTCAGTATGTG 57 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301310 3 1 4 140 3R 6589660 6589837 TCAAATGCATACAGCAGGC 58 6589938 6589959 TCCATCTCAATGATATTGAGCG 58 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113218 2 1 3 83 3R 7031326 7031344 ATTAAGCGAGCCAACAAGG 58 7031389 7032640 AAATGAACCCATTCTGGTCAG 58 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 1 2 2 86 3R 7414839 7414857 CATAAGTTCACGCACCTGC 59 7414717 7414792 ATGAACCATAAGATCTTGCCTG 58 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 2 6 6 82 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460707 7460787 ATCGGCTAATGGAATTCTGG 57 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301722 3 2 3 104 3R 7867596 7867614 TGATAGTTTCAGTGGCGGA 58 7867682 7867754 AAGGCTTCACCAGTACCTG 59 NA Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100525 1 1 2 80 3R 8221479 8221497 TCCTGGTTAGAACCAAGCG 59 8221293 8221439 GTAGAACTTCAAACACCTGATCC 59 NA Nonspecific Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 1 3 3 91 3R 8825930 8826123 TGCTGACATACATTCTGGAC 57 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225 2 1 3 87 3R 8832869 8832887 GAGTCATTCGCTACGACGA 59 8832933 8833266 GAAATATTGTGTATGGAGACCTCG 59 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 1 2 2 81 3R 9093475 9093560 ATATGAGCGTTCGATCCGA 58 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 1 8 8 81 3R 9487885 9487905 ATTCGAAGACTATCGTGATGC 58 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 1 7 7 87 3R 10634007 10634094 CTACGTTAAGGTGTATCTACTGC 58 10633942 10633960 GAAGATGGGATTCAGCGTG 58 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 2 3 7 81 3R 10653003 10653267 TTCTTGGACCATATCGAATCC 57 10652942 10652960 CTGCGGATATAGGTTGTCC 57 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301104,FBtr0301103 1 2 6 184 3R 11025424 11026417 GAGGATGAGTTACTGCGCA 59 11026565 11026583 AGATGATTGCGCTGTTTCC 58 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083152 3 1 2 89 3R 11366515 11366534 ATTTGAGGCTCTGGATGTCC 59 11366253 11366463 ATGAGGAAGCCGAGATACG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0301655 2 1 8 100 3R 11780836 11780855 TTACTTCTACCGCGTCTCAC 59 11780917 11783321 TTCAATCTTCATCTTCGCCG 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083232 3 1 6 80 3R 11903248 11908593 TCCGTATAATCCTCTTCCGC 59 11903187 11903208 GTATAATGCGATCTGAGAGCAG 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 1 3 3 107 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636028 12636046 GAAGCGAGTGTAGGTCTGG 59 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 3 5 5 81 3R 12755407 12755426 CAATGCGTATGTTTCCAAGC 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0089473,FBtr0290014,FBtr0290015,FBtr0290013,FBtr0089471 2 5 5 86 3R 12920387 12920405 TCTCGGTGAAGTACGATCC 58 12920256 12920337 TGAAGGGAGATCCTTGCAC 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 1 5 6 80 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229686 ACATCGCGTATCTTGACAC 58 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 3 5 5 85 3R 14585655 14585786 ACCTGAAAGATCCGGACTG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 Xrp1 FBgn0261113 FBtr0083701,FBtr0083700 3 2 5 131 3R 14747034 14750813 CATTGATGAATACCTGCAAGAC 57 14750905 14750923 TCAATCAGATCCTCCTCGG 58 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 2 3 3 172 3R 15229537 15229625 TCTTTCACTTGAACCGGAG 57 15229760 15229779 TGTTGATACGAAGTCCTTGG 57 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 2 4 4 81 3R 15444447 15444530 CATGAACACAGAGCTTAACTGG 59 15444387 15444407 CACGGAGCCAATAAAGAACAG 59 NA Drosophila melanogaster 61 Pk92B FBgn0014006 FBtr0300256,FBtr0083819 2 2 2 80 3R 15708032 15708052 TTCTGGATGGACTTCTTTCTG 57 15708094 15708168 CTCGAGGATCAGAATCGGA 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0100457 1 2 5 163 3R 16365076 16365137 TACTCAAAGCGTCAAGAGC 57 16363174 16364949 CCAAAGTCACCATTTCCCA 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 1 5 5 82 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396867 16396885 TTGTCTATCTCCCGAGCCT 59 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0113257 2 1 2 127 3R 16753181 16754412 GAAGCAAGCTGAACTCGTG 59 16754580 16754598 TTTCCTGGTAGCCGATGTC 59 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517 2 1 4 62 3R 16894728 16896004 AGTCCTGGATCAAGGAGGA 59 16896030 16896048 AAGCCGTAAGAGTGACCAG 59 NA DesignRelaxed Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0110937 1 1 16 80 3R 17036415 17036518 TTGCTCAAGAAAGAAGAGGAC 58 17036559 17036578 GGTGGGTATCAGATCATAGC 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 2 2 16 158 3R 16980783 16980964 CATGCCCACGTCTAATTATGG 59 16981084 16981102 ATGTCGAAGTCCCATTCGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084069 2 1 22 82 3R 17200833 17200851 CAGTCCCAGAACTACAGTG 57 17183074 17200787 TACGCAACAGAACCTTGAG 57 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084061 3 1 22 186 3R 17181970 17200796 ACACAGAGGCTCAAGTGAC 59 17181802 17181820 TCCTTATAGGCGGCATTCC 59 NA Drosophila melanogaster 61 CG15499 FBgn0038891 FBtr0084124 3 1 1 185 3R 17357749 17357768 ACACATTGATGAAGGTGTGG 58 17357357 17357379 CCAGACAATTATGGATTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0084125 2 1 2 81 3R 17568320 17568338 CAAGATGTTTCATCACGCC 57 17568380 17568476 CACGCTATAACGATATTTCTCC 57 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 1 6 6 126 3R 17704995 17705013 GAGCTGGTGGACTTTATGC 58 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 3 2 2 217 3R 17863397 17863415 TTGTGCAGTACGATCCTCC 59 17863596 17863693 GATCAGTTTCTCCAGCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5778 FBgn0038930 FBtr0084182,FBtr0113265 3 2 2 114 3R 17911577 17911962 CTACGACTGTAATCCACCC 57 17911481 17911499 GTTGTAGTATCCTCCACCG 57 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 2 5 5 80 3R 18430300 18430377 AGCAGCTTTAAGAAGACTCC 57 18430418 18430438 CAAATACAGCACAAGATCACG 58 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 1 4 4 80 3R 18614228 18614309 ATAGTTTCTATGCGGATCCCA 58 18614351 18614369 TGTCCTCCAGATTGCTGTG 59 NA InUTR Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 1 2 3 185 3R 18878909 18879086 AAAGAAAGCACTGATTCCGAG 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273 3 1 3 135 3R 19004882 19008672 GAGGAGCTTCTCAGGTACC 58 19008771 19009172 AGATGTCCTGCAGATAGCG 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392 1 1 7 80 3R 19035106 19035126 ATCAACTGGAGGACATTACCA 58 19023681 19035066 GCAAGCGTATGTATTCACCAG 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0084385,FBtr0100227 3 2 6 113 3R 19095552 19095570 CAGACTGACTAGTGGCGAC 59 19095310 19095477 TTCAGTGTGATTGGATTGCAG 59 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421 2 2 3 103 3R 19350705 19351229 AGATCTCTGCGGAAAGAGC 59 19350620 19350639 CTATAGTAGCCTCCTCGCTC 58 NA Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 2 2 2 87 3R 19587401 19587419 GAAATCCTGTGCCTGTTCG 59 19587274 19587353 CCAAGAATTCTCGTTCTGAAGG 59 NA Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 3 2 2 90 3R 19587401 19587419 GAAATCCTGTGCCTGTTCG 59 19587271 19587349 CCACCAAGAATTCTCGTTCTG 59 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 2 2 2 108 3R 19760639 19760754 GATAAGCGCTATTTGATGCC 57 19760825 19760843 CGTGCACAGTATTCAAACG 57 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089497 2 1 3 95 3R 19762361 19763157 TACCATCTGCTTGAATCCGT 59 19762285 19762303 CTTCTGGAACGACTCGGAG 59 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 1 6 6 81 3R 20082819 20082910 CACGGTTATCATGGTTCCTC 58 20082757 20082775 TAGTCGACTGTAGATGGCC 58 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084667 2 2 3 81 3R 20475260 20475376 CCTGGAGCTCTATGAGGTG 59 20475197 20475215 GAAGGTGGTCTCGATCTCG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 2 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521838 20527819 TGGTGTTCATCTAAGTCATCG 57 NA Drosophila melanogaster 61 CG13630 FBgn0039219 FBtr0084745 2 1 1 80 3R 20544868 20544886 TTCTGGAAGGAGCACAAGG 59 20544737 20544755 TGGATTGTAGGCTCCATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 3 5 5 61 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451841 21451860 TTATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 1 3 5 197 3R 21507903 21507921 TGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 2 3 5 198 3R 21507902 21507921 ATGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 1 3 7 80 3R 21577832 21577853 TTGGTGTTTACTCTTCGTTAGC 59 21575102 21577793 CAAGTGGCCTCATTTATAGCC 59 NA Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978 3 1 2 81 3R 21877632 21877707 AGGAGATATCACGTAATCTCGAG 59 21877573 21877591 ATGGTGGCCAGAATATTGC 58 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100012 2 1 2 81 3R 22175888 22181333 CGCATATGATCGGTCTACTG 58 22181377 22181395 TCGGCATTATACTGCTGAC 57 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 3 3 3 80 3R 22686674 22686758 CTCGACAAATGAGCTGTTGG 59 22686613 22686636 GTATAGTTCTTGCCATCCTTAAGC 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085141,FBtr0114372,FBtr0085144,FBtr0085142,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085146,FBtr0085140,FBtr0085143,FBtr0112834,FBtr0085139 1 12 12 80 3R 22891750 22891835 GATCGAAGAGTGCGAAGGA 59 22891688 22891709 TGCTTGCAGATTGGATTATAGC 59 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 1 2 3 84 3R 23058250 23058268 ACACGATAGTCTCACTGCG 59 23057911 23058202 TCTTCACATTCCTGCAGCT 59 NA Drosophila melanogaster 61 TfIIA-L FBgn0011289 FBtr0085155,FBtr0085156,FBtr0085154 1 3 3 80 3R 23081101 23081182 GCATTATGCCTGTTAACATCAC 58 23081223 23081241 GCACTTGTATGGTGAGCAC 59 NA Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 2 2 2 88 3R 23779656 23779731 TATACCAGTACAAGAAGCACC 57 23779588 23779606 ATCATTCTTGGATTCCCGC 58 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0112583 1 1 3 80 3R 23875957 23875975 AGCAGTACCAGATCCACTC 58 23876019 23901407 GGAATTGTTCCTGCTTGGG 59 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 2 5 6 83 3R 24639656 24639675 TTACTGCTACGGATATTGGC 57 24639720 24640880 CGCTCAAACACCTTATAGCA 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 1 4 13 134 3R 24714131 24714149 CTAACGCAACTCTTGAGCG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 1 4 13 134 3R 24714131 24714149 CTAACGCAACTCTTGAGCG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 3 4 5 87 3R 25297563 25298886 ACTGCAGAACTTACGACCC 59 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888 2 1 2 80 3R 25695767 25696972 GATAGGACCTAATAGCTCAACG 58 25697012 25697031 ATCGCATCTGTCTCAATGAC 58 NA Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 3 2 2 130 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763339 25763359 CATGTATTCATCCGTGTTCCT 58 NA Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 1 3 3 91 3R 25864784 25864802 GGTCTACGGATACTCGCAG 59 25864605 25864623 TTTCGATCGTGTAGTCCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18682 FBgn0040625 FBtr0302312,FBtr0085588 1 2 2 80 3R 25948594 25948612 GGGTCTGGATTATCTGGTG 57 25948473 25948551 ACTACAACTAATGGCTTCGG 57 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0085662,FBtr0302110 1 10 12 113 3R 26398693 26398711 TGGTGGAGAAGAACTCGTC 59 26398786 26402912 GTTTCACACGTATTCTGTCGA 58 NA Drosophila melanogaster 61 dco FBgn0002413 FBtr0085742,FBtr0085743,FBtr0085744 3 3 3 126 3R 26884266 26884284 CTCAGACGAAAGGACAGTG 57 26883547 26883565 ATATTTGTTACCCACGCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 2 3 3 80 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028838 GAGTGTAGTAGTGCTTTCCAC 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 2 4 4 108 3R 27230212 27230232 CCTCAAATGCCTAAGTTTGTC 57 27230068 27230142 CATGTTACGTCCATTGCTG 57 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 2 8 8 167 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 2 8 8 167 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 3 4 8 81 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162749 162840 GCAGATGAACCCAACAAGTC 59 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089114 3 1 3 170 4 231301 232283 TGATCAAATCGTTTACCGCA 58 232415 232493 AAATCATCTTGATCGCTGCC 59 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 3 2 2 91 4 282343 282415 AACACAACGTATTCGGAATCG 59 282468 282486 CGTACAACGTGTCTCTGTG 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 3 5 6 199 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322902 322923 CCAACTGAAGAAATGATTTGCG 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 2 2 4 107 4 585200 585218 TCTCAAATCGCTTTACCGG 58 585286 586054 CGGTAAATCTCCTTTAAACCCT 58 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0110907,FBtr0110906 2 2 3 104 4 660290 660308 AATCCTATCGAGAACGCAG 57 660146 660222 TTCTATCACTGAGTCCCGA 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100396 1 1 4 96 4 725814 725832 AACTGCTATAGGCACCGTG 59 725890 728128 AATCACATTGTCCTTGTGAGC 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 3 9 9 80 4 1068498 1068518 CCAGGATATCTGTCTCCTGAG 58 1068345 1068457 AAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 1 2 2 98 4 1194713 1194793 ACAATACAGACTCGACTGGA 58 1194634 1194652 TACAACCCTTATGTGGGCA 58 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 2 2 4 85 X 516383 516478 CATATCAGGGAGCTTCTTCAG 58 516524 516543 GTCTTTCCGTTCAGGAAGTG 58 NA Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 2 2 2 88 X 971124 971254 ACAATCGAACAGCCATGGA 59 971054 971072 ATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 2 1 1 87 X 1065713 1065731 AACACGAACGTTAGCATCG 59 1065899 1065917 CGTAGAAGGTTGCGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 1 3 3 80 X 1187402 1187420 CATGCTCGGTATACAGCCT 59 1187280 1187360 TCAAAGAAGTCCAAATGCCTG 59 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255 3 2 3 84 X 1365309 1365329 CTTTAAGGACTTCGTGTACCC 58 1365375 1365452 AACGTAATACTCGTGCGAG 57 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815 3 1 2 84 X 1571089 1571178 AACTATACGAGATTCGCCCTG 59 1571025 1571043 GATATTTGCGTGGTGACGG 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 3 3 4 81 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643784 1643804 CCATAATTATCGCTTGTCCGG 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 1 6 6 80 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744707 1744725 TCTATATCCTCGCTGGTCG 58 NA Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 2 2 2 60 X 1795115 1795136 CCATGGTTATGACCTTTACAGG 58 1795025 1795043 GACACAATGGTCAGGAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 2 1 2 125 X 2101598 2101616 AGATGACCAAGCACTTTGC 58 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 3 2 2 106 X 2342606 2342624 TGGGACAAGATCGTCAAGG 59 2342694 2342833 TACTGTTTGCGGAGTCTGG 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 1 4 8 80 X 2384863 2386386 CAAGGAGAATAACGACGTTGG 59 2384803 2384821 ATACATTCGCCGTTCATGC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091962 1 2 8 173 X 2380225 2380247 CCAGATATGTGATTTAAGCAGGG 59 2378777 2380092 GTTGGATCGTTGGTGTCTC 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 1 2 12 178 X 3208476 3208494 TGTGCTCCGATCTAATGAC 57 3208636 3215086 TTCTACATCGAAACTGCCC 57 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 2 4 12 122 X 3175075 3175093 TTTGAGTCCAATTCACGCA 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 2 2 3 81 X 3408481 3409291 GTGGAAACTTGGTGTCGAG 58 3409336 3409354 ACTTTAGGCAGAAGTGCCA 59 NA InUTR Drosophila melanogaster 61 cib FBgn0026084 FBtr0070641,FBtr0070639 2 2 3 63 X 4004036 4004195 TAAGGAAGCCATCGAGCAG 59 4004222 4004240 ATCAAAGTTCTCGATGCCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 3 5 5 81 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016108 GTCTAGCTGTCGAGTAGTCG 59 NA Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 3 2 2 85 X 4432733 4432816 ATCATGACGAACACGTGGT 59 4432666 4432686 GATAATCTCAAAGTGCTCGGC 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0301914 1 3 5 127 X 4961267 4962173 CACTCATCCAAAGCTTGGG 58 4962264 4962282 ATCGATGTTGCGAATTCGG 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 3 5 5 114 X 4962726 4962744 CAATCTCTGCGAGAAGAGC 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 2 5 7 102 X 5277590 5277611 TCTAATGACAATATGTCCGGGA 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 3 2 3 80 X 5559771 5559789 TGGAGGACTTTCTCCTGTC 58 5559649 5559728 TTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 1 3 3 91 X 5654841 5655210 TACGATCAGATGCAAATCAAGG 59 5654771 5654792 ATGTATAACTCCATCTCCTCGA 58 NA Drosophila melanogaster 61 CG15894 FBgn0029864 FBtr0112955,FBtr0070901 2 2 2 116 X 6215018 6215857 ATGTATTCGAGCAGGTCGG 59 6215936 6215955 CGGAATCCATGAAGTACAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 3 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071169 1 1 3 88 X 8138523 8140142 GTATAATGGATCCTACGACTACGA 59 8140189 8140207 CTCCATTGAGGACTGCCTC 59 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 1 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112688 2 1 4 199 X 10413798 10469430 CATCATGGAACAAGTGAACCC 59 10413619 10413637 TTGAGATTTGACTGGGCCA 59 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 1 4 4 80 X 10655534 10655624 CCGTATCCCGATGATATTATCTG 58 10655476 10655495 CACCTTGGACATAATGGACC 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 2 2 2 81 X 11684959 11684977 ATCCACAGAGGAACTTCCG 59 11685017 11685105 GTTCATCGTTATATGCTGATCCTC 59 NA Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 1 2 2 109 X 11747508 11747526 ATCCAATGGAAGCTCCACC 59 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 3 4 10 85 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848300 11856056 GTTGATTGAGTTCGACCCG 59 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 1 1 1 74 X 12447495 12447516 TCGTTAGGAGCGATTATAACAG 57 12447659 12447680 GGTGAATACCATTACCAGTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3812 FBgn0030421 FBtr0073689,FBtr0073688 2 2 2 219 X 12661316 12661334 CATCGTGTCGTTCAACTCG 59 12663853 12663961 GATGTTGAACATGCCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 1 5 5 116 X 13230405 13231548 AACAAATCCAGCCATGGTG 58 13230307 13230325 ATGATCACCTTGGAGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 2 2 2 60 X 13280859 13280878 TTGATCAGTACCCGATTCAC 57 13280752 13280770 TGACCACACGCTTAAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 1 4 4 80 X 13606929 13607024 GCCATGATTAGAAGACTGATTGAG 59 13607063 13607081 TATGTTGTGCTTGCGTGAG 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 2 4 4 80 X 13726825 13726845 ATCCAGATATGAGCCAATTCG 58 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 3 2 2 134 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100682 14100701 TTATTGATACGCAGCTCCCA 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073951,FBtr0073949 1 5 8 80 X 14820837 14820855 TGGAAAGAGCGTCAAGGAG 59 14820898 14824789 GTAAGCGTTCCCAATATGGC 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 1 2 8 96 X 14818434 14819687 CAAGATCATGAAGTCATCTTCG 57 14820825 14820843 CTTTCCAAGGAATTGCTCG 57 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 3 2 8 122 X 14819703 14820802 TATCATAACGACGAGGCCG 59 14820885 14820906 CAATATGGCTCTCAAATGTCCT 58 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 2 1 2 131 X 14771780 14771798 AAAGAGAACAACAGTCGGC 58 14771335 14771582 TACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0073967,FBtr0110969,FBtr0110968 2 3 3 60 X 14969792 14969810 AGTCCCAGGATGTCTATGG 57 14968377 14968396 GTTAAAGCCCATTCGAAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 3 2 5 104 X 15272262 15272280 GCTACAGTCCCTCCTATCG 58 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301232 2 1 2 197 X 15816165 15816514 ATAATCGGATTTATGGCGCAC 59 15816673 15816691 ACTACGCTTAAGCGATCCA 58 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 3 3 3 110 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494497 16494515 AGGATAAGGCATCGTTCCC 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0074386 2 1 4 148 X 17019042 17020045 TACACATAGGTGACACTACGA 58 17020371 17020389 GATCAGTAGGCGAGAGTCC 59 NA Drosophila melanogaster 61 CG5613 FBgn0030839 FBtr0074432,FBtr0074431 3 2 2 99 X 17320861 17320879 TCTAACCCGTCTCTGTGAG 58 17320941 17321462 GACAAAGCGGTATAGTCTGG 58 NA Drosophila melanogaster 61 X11L FBgn0026313 FBtr0301696,FBtr0074451 1 2 2 80 X 17497495 17497738 AACAAAGAGGGTCTCTTGGA 58 17497780 17497799 AAGTTGAGTGGATCCAAGGT 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302834 3 1 5 121 X 17615639 17640617 AGTGAACTAGATACGTCCTATGAG 59 17640697 17640715 AAGAAGTTGGTGAAACGCG 59 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510 3 1 4 176 X 17767420 17768448 CTATTATACTATGTCCGCTTATGGG 58 17766767 17766786 GAAGACGAGGGACTAGAGTG 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074554 1 1 9 60 X 18266504 18266522 GAGTGTCAGGTGTTACGGA 59 18266546 18267081 TATCACGGACTGCACATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 3 1 2 79 X 18642098 18642116 TTCATGGGAGAAGATTGCC 57 18641944 18641963 ATCGATCAACGTAGTAGGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0113004 3 1 2 83 X 18800155 18801538 CCACTATTATCAGTCGCCCA 59 18801584 18801602 ATCGAGTAGTGCAGGACTC 58 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 3 2 4 114 X 19040166 19044852 GAGGACATGATTGTGCCAG 58 19040070 19040088 TGGAGACGCTCTTATAGCG 59 NA Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082,FBtr0074784 3 2 2 92 X 19382706 19382779 GATTCAAGTCAGCATCATGGT 58 19382634 19382652 AAGGTGCTCAGATAGTCCC 58 NA Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731 2 1 2 74 X 19492106 19492199 GCGGGAGTATTACGATACG 57 19492235 19492482 CCTTTGGCATAAACATTCTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 2 1 1 60 X 19572307 19572325 TGTGATCCTCTTCAGCACG 59 19572183 19572203 GTTGATCACGTACAGTTGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 2 4 5 80 X 19905587 19920748 TCTACTTTCTGGTAAATGGAGC 58 19905528 19905548 TAGAGCATATCACATCCATGG 57 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 3 5 5 81 X 20644230 20644251 TAACGCTAATATACAGGGTGGT 58 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 3 1 1 61 X 21194163 21194181 ATGTTCAATCGCCAAGTGC 59 21193152 21193173 GGGAAGAGTTCGTATTTAACCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 3 5 5 97 X 21473853 21474023 TAATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 3 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299522,FBtr0299523 1 3 5 90 X 21900448 21904482 AGAACCGGATAGCCAAGTC 59 21904535 21904554 AATACTGTGTCTTTGGCGAC 58 NA Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0070095 2 1 2 92 X 375591 375649 AGGAAGTAGGAGTAGGACCC 59 375518 375536 TCAGAGCTGAGAACCATGG 59 NA Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 2 1 1 117 XHet 63655 63675 AGAAGCTTAGAGAAGTGGCTG 59 64087 64105 CAATTTCCACCCAGTGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:G3:28D FBgn0011861 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-9b FBgn0067679 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-2a-2 FBgn0046825 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:42Ac FBgn0011957 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30298 FBgn0050298 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C3227b FBgn0082939 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32358 FBgn0052358 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32127 FBgn0052127 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31588 FBgn0051588 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-279 FBgn0260633 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG41503 FBgn0085787 FBtr0302230 3 1 1 109 YHet 305922 305940 AACAATCGTGACAACAGGG 58 306013 306502 TCAATTGACTTGACGCCAG 58 NA Nonspecific Drosophila melanogaster 61 snoRNA:U3:9B FBgn0065046 FBtr0091641 1 1 1 109 X 10242244 10242262 GTTGAATCGTTCTGTCCGG 59 10242335 10242353 CTATCCGTTCAAACCGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300634 1 1 2 70 X 7792957 7793174 TATGTGCATATTCGTGGCC 58 7792905 7792923 TTATTGCAGCGTGGATGGA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Cda4 FBgn0052499 FBtr0077362 3 1 1 80 X 21990351 21990369 CACTAACTGGTTCCAGACC 57 21986113 21990308 TAGACGTCAGGTAGTTCGAG 58 NA Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 2 2 2 85 X 21879073 21879091 GGTACTGACCATCCTGGTC 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 CG1724 FBgn0031164 FBtr0077257 3 1 1 60 X 21073795 21073814 CAATTCTGATCCGCAGAACG 59 21073754 21073772 CATTCCGGATCCAGAAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42578 FBgn0260868 FBtr0301566 3 1 1 103 X 20317457 20317475 AAGCCAACTGGAAACAACG 59 20317542 20317560 CTGATGTGTTCTTCCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pp4-19C FBgn0023177 FBtr0077324,FBtr0077325 3 2 2 60 X 20293018 20293101 CCAATTACTGCTATCGCTGC 59 20292977 20292996 TGCAGGTACTCATTCAGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15460 FBgn0031104 FBtr0302241 2 1 1 81 X 20261521 20261539 AGCAGCCTAACAGAAGTCC 59 20261402 20261476 TCCAGCATGAGCAAATTGC 59 NA Drosophila melanogaster 61 CG42583 FBgn0260873 FBtr0301570 3 1 1 68 X 20034125 20034143 CCTCATGGCTGTAATCCGA 59 20034175 20034193 TCATCTACCCATCTACCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074817 1 1 3 115 X 19635187 19638302 CAACAAAGCGACAAATCGTC 58 19635091 19635109 TACGACTGGTAGCAGTAGC 58 NA InUTR Drosophila melanogaster 61 CG14221 FBgn0031042 FBtr0290086 2 1 1 85 X 19513566 19513584 TTTAACGGTGACAATCCGC 58 19513416 19513518 TTGTCGGTAGGAACATACGG 59 NA Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 3 2 2 93 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584936 18584955 ATGTAGGTCATCCCGAACTG 59 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510,FBtr0300509,FBtr0300508,FBtr0299619 1 4 4 80 X 17764201 17764297 TACTACATCGTTAAGCTCAAGC 58 17764142 17764160 CAGGTTGTATGAGAGCAGC 58 NA Drosophila melanogaster 61 CG8661 FBgn0030837 FBtr0074444 2 1 1 65 X 17178385 17178465 CGTAAATGCATTGGTGGCT 59 17178338 17178356 GTCACATCGTCCAGTTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32564 FBgn0052564 FBtr0074390 2 1 1 60 X 17100883 17100902 CAGCCCTCTTACTCTTACGG 59 17100923 17100943 ACGAGTATCCTCCATAGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wus FBgn0030805 FBtr0074418 3 1 1 92 X 16834017 16834547 ATCGCAAGTGGTAATCCGA 59 16833943 16833962 CTTTGGAGGTATCGTTGGTC 58 NA InUTR Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474,FBtr0074335 2 2 2 83 X 16701916 16701936 TGCACTTCTACTACATGACCA 58 16701978 16702062 CCGTATTAGACAAGAATTCGGT 58 NA Drosophila melanogaster 61 Ranbp16 FBgn0053180 FBtr0074162 1 1 1 81 X 15826642 15826890 CAGCAAGCGTTAATATCACAC 58 15826581 15826599 ATTCATCTGTCGAACTGCC 57 NA Drosophila melanogaster 61 CG5662 FBgn0030620 FBtr0073999 2 1 1 60 X 15104657 15104677 ATGTGCAACCTACCATTTACG 59 15104697 15104717 CACCTGGTGACATAAACTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 2 2 2 127 X 14127233 14127252 TACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 3 2 2 107 X 14117987 14118071 CAGAACAATTACAGTTCGACCT 58 14118139 14118157 CTGTTGCGTCATGATGTCC 59 NA Drosophila melanogaster 61 CG32603 FBgn0052603 FBtr0073894 3 1 1 130 X 14078621 14078744 CCAGCAACATGAAATTCTTCG 58 14078836 14078854 GTAGGACTCGTAGCTGGTG 59 NA InUTR Drosophila melanogaster 61 Ste:CG33240 FBgn0053240 FBtr0300089 2 1 1 110 X 13949863 13949881 TCTGATACACAGCTGGACG 59 13949711 13949789 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 3 2 2 155 X 13890546 13892135 GCTGTTACGATCTCAACGA 57 13892254 13892272 GAATGGCATTGATCCCAGG 58 NA InUTR Drosophila melanogaster 61 CG11151 FBgn0030519 FBtr0073819 2 1 1 107 X 13634135 13634718 CAAGGAGTGGACTCTGGAC 59 13634789 13634807 ATGTCAACCATGTCCTCGT 59 NA Drosophila melanogaster 61 BthD FBgn0030501 FBtr0073806 2 1 1 148 X 13506614 13506632 GATTCTAGGTGACCAGCAG 57 13506744 13506824 AAGTTGAAGTTGGTGCCTC 58 NA Drosophila melanogaster 61 CG32633 FBgn0052633 FBtr0073800 2 1 1 219 X 13455749 13456015 AGACCACAGATGGATGCAC 59 13456198 13456216 GTAGTTGTAGCCGGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32635 FBgn0052635 FBtr0073780 1 1 1 80 X 13390168 13390186 AGAATGAGCTGTACAGCCC 59 13390230 13393839 CCTTTGGCGCTGTTATCAC 59 NA Drosophila melanogaster 61 dmrt11E FBgn0030477 FBtr0073768 1 1 1 81 X 13263203 13263223 AAAGAGGATCTACAAGCAGAG 57 13263264 13264042 CTGTTTGTATTCTTCCATGGC 57 NA Drosophila melanogaster 61 IP3K2 FBgn0085388 FBtr0112575,FBtr0112573,FBtr0112574 1 3 3 80 X 13221901 13221919 CAAGCCACGTTACATGGTC 59 13221963 13222197 CTCTTCTTGATGCCCTCGA 59 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202,FBtr0290203,FBtr0073733 2 3 3 60 X 13151897 13151918 CATTGAAGAGCTCACCAATCTG 59 13151858 13151877 ATAGGAAACGGGCTCATACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32638 FBgn0052638 FBtr0300453 2 1 1 127 X 13020131 13020149 CATGTTCTGGTCGATGCAC 59 13017712 13017816 CCCAGCCATTCATAATGCC 59 NA DesignRelaxed Drosophila melanogaster 61 lic FBgn0261524 FBtr0073720 2 1 1 117 X 12986247 12986327 CATCTCAGGCTACCTCGTC 59 12986408 12986426 CGACCTGATGTCGTATTGC 58 NA Drosophila melanogaster 61 CG32642 FBgn0052642 FBtr0073713 1 1 1 125 X 12853572 12853674 CGGAAAGAAGGAACTCATCC 58 12853761 12853780 CGAACCGGAGCATAATTCTG 59 NA Drosophila melanogaster 61 CG4404 FBgn0030432 FBtr0073694 3 1 1 120 X 12799064 12799661 GATATCAAGGACACGGTTCG 58 12798963 12798983 ATAGGTAGTATTTGCGCTTGC 58 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 2 2 2 93 X 11888947 11889034 ACCTATAAGATTGGAGCACTGG 59 11888875 11888893 ATTGTCCACTATCCGTGCA 59 NA Drosophila melanogaster 61 wisp FBgn0260780 FBtr0073573 3 1 1 81 X 11792386 11792692 AACTTTACGCCCAAATGGA 57 11792736 11792755 TCGTTGATGTCGTGATACTG 57 NA Drosophila melanogaster 61 CG1737 FBgn0030293 FBtr0073453 3 1 1 170 X 11245156 11245174 TAAGAGTGACCATCCGCAG 59 11245306 11245739 CATCTTTCATGGGTAGCTTCG 59 NA InUTR Drosophila melanogaster 61 CG11122 FBgn0030266 FBtr0073481 2 1 1 194 X 11015098 11015116 AGAAGCTCAAGCAGCTCTC 59 11014861 11014941 GAATGGATTCAGCATCGCTG 59 NA Nonspecific Drosophila melanogaster 61 CG2076 FBgn0030263 FBtr0073428 1 1 1 94 X 10985811 10985829 CTCTATGACACTCAGCGCA 59 10985887 10985968 TAGATCGACATTGAGGCGT 58 NA Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 3 4 4 80 X 10655531 10655622 GTATCCCGATGATATTATCTGTCC 58 10655474 10655492 CGCACCTTGGACATAATGG 59 NA Drosophila melanogaster 61 CG15296 FBgn0030215 FBtr0071512 3 1 1 60 X 10460340 10460360 GTTAGATGAGAGCGATCTGAG 57 10460300 10460323 CACTCCTTCATTGTAGTATTTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15311 FBgn0030182 FBtr0071436 3 1 1 146 X 10080760 10082184 GCAGCTGATATCATACTTGAATCTC 59 10082286 10082306 CAATTTGTAGTTGTGGTGGCT 59 NA Drosophila melanogaster 61 CG15251 FBgn0030166 FBtr0071427 2 1 1 128 X 9864484 9864502 CTATCGGCACTGCTATCGT 59 9862130 9864392 ACTTAACACCTCCTCTGCG 59 NA Drosophila melanogaster 61 Ser7 FBgn0019929 FBtr0071387 3 1 1 198 X 9759421 9759503 CAATTTGGCAAAGCTATCATGC 59 9760023 9760044 CCAATGGCGGTATAATATTCGT 58 NA Drosophila melanogaster 61 CG42657 FBgn0261522 FBtr0302457 2 1 1 130 X 9582790 9582874 TCTCATTGCAAAGGACAATGG 59 9582964 9582984 GAAATCCAGACGACAAAGGTG 59 NA Drosophila melanogaster 61 CG32702 FBgn0052702 FBtr0273437 3 1 1 80 X 9458593 9458672 TCCTATAACTACGAGCACCAC 59 9458533 9458553 CTGGAATTTGCTTGGAAAGTG 58 NA Drosophila melanogaster 61 CG32702 FBgn0052702 FBtr0273437 2 1 1 80 X 9459458 9459477 TTTATCAGCGATGATTCCGT 57 9459330 9459416 ATCAACGATTATCGTTTGGC 57 NA Drosophila melanogaster 61 Rbm13 FBgn0030067 FBtr0071255 1 1 1 124 X 8796837 8797247 ATATTGAGGAGACCAAAGTGC 58 8797333 8797351 ATACTCGTACTCCAGCTGC 59 NA Drosophila melanogaster 61 Lim1 FBgn0026411 FBtr0071279 3 1 1 88 X 8681699 8681720 TGGACGACAATAAGTTCATCTG 58 8662965 8681652 CATTAATGAATCGCTCAGCGA 59 NA Drosophila melanogaster 61 l(1)G0020 FBgn0027330 FBtr0071280 1 1 1 80 X 8612201 8612221 TCAAGGACTACTATGCAAGGA 58 8612081 8612160 CCTCGATACCTTTACCAGCA 59 NA Drosophila melanogaster 61 CG12081 FBgn0030053 FBtr0071218 2 1 1 60 X 8483943 8483962 GTCTTCGGTGGCTATAATGG 58 8483983 8484003 GATCGAAGGTGTACAGATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp7Fc FBgn0014466 FBtr0071202 3 1 1 127 X 8371217 8371310 ATTCACGCTGAGAATCTAAGTG 58 8371398 8371416 TTATCGTATGGCTCAACGC 58 NA Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 2 1 1 266 X 8377620 8377638 TGCTGCGAATAAAGTTGCG 59 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12123 FBgn0030039 FBtr0071245 2 1 1 216 X 8335879 8335897 TACAAATTCGCCGACATGC 59 8335623 8335641 TGTAGTAGAGCTTGCAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 1 3 3 80 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333785 8333863 ATACTCCCGTAGCTTGCTC 59 NA Drosophila melanogaster 61 Or7a FBgn0030016 FBtr0071186 2 1 1 81 X 8058363 8058585 ACTTCAGTATAGCCAAGTTCTC 57 8058303 8058321 TTTGTCCTGTTGAATCGCT 57 NA Drosophila melanogaster 61 CG1402 FBgn0029962 FBtr0300019 3 1 1 80 X 7732874 7733758 CCAAACAGGAGTTGTACCA 57 7733801 7733820 GCGCATTATTACCTAGTGGA 57 NA Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 3 2 2 151 X 7127127 7127145 GAACCCTACGATGAGGAGG 59 7127258 7131099 GTATAGTTGCTGGGTTCTGTG 58 NA Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 1 2 2 98 X 7126724 7126743 CCAGCGGATCTAGGATACAC 59 7126802 7126953 TGTCGTTCTCGTCTACTAAGC 59 NA Drosophila melanogaster 61 CG3198 FBgn0029887 FBtr0070991 2 1 1 120 X 6567588 6567679 GGATCCGGAGTTCTGTCAG 59 6567486 6567504 GTAGAGATGTCGGGCTTCC 59 NA Drosophila melanogaster 61 APC7 FBgn0029879 FBtr0070947,FBtr0070946 2 2 2 90 X 6492557 6492575 GCTCAGAAGCGATTCAAGG 59 6492629 6492717 GACCAAACATCGTGAAGCT 58 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323,FBtr0112706,FBtr0112707,FBtr0301324,FBtr0112704 1 5 6 85 X 6456185 6456268 GGATAATGTCGAGGAGCCC 59 6456317 6456335 TAATGACACTGGCTCCCAG 59 NA Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952 2 1 2 120 X 5934806 5935625 GCAAATCGCTTACGATAAGCT 59 5935707 5935725 GAACTTGGGTCGCTTTGTG 59 NA Drosophila melanogaster 61 CG3726 FBgn0029824 FBtr0070858 2 1 1 104 X 5835212 5835230 GGAACTCTGGATCCACCTC 59 5835298 5835370 GATTGGTTTGGACCAGCTG 59 NA Drosophila melanogaster 61 CG16721 FBgn0029820 FBtr0070821 2 1 1 93 X 5775270 5775288 AGAATTTGCGCAACATGGA 58 5775345 5775427 CCCTCCAAACTATCCGAGG 59 NA Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070810 1 1 2 118 X 5650870 5651901 ACAAAGAAGCTAAACTCGCTG 59 5651981 5651999 TTGCGAGTTATCGGGACAG 59 NA Drosophila melanogaster 61 lin-52 FBgn0029800 FBtr0070840 3 1 1 84 X 5648818 5648894 GGATTTGCTTTCTACAGAAACC 58 5648755 5648775 CAATAACGTACTACTGCTGGA 57 NA Drosophila melanogaster 61 CG15772 FBgn0029799 FBtr0070808 3 1 1 60 X 5647287 5647308 TGATCCTTCTCATCGATTTCGT 59 5647329 5647347 TCGGAGCTCTCATAGAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852,FBtr0070851 1 2 3 88 X 5559773 5559791 GCTGGAGGACTTTCTCCTG 59 5559502 5559721 AACGGTAATCGGGAATCCC 59 NA DesignNoJunction Drosophila melanogaster 61 Vsx2 FBgn0053980 FBtr0100024 3 1 1 102 X 5425473 5440771 AGGATCGCATACAGGTGTG 59 5425389 5425407 CCATAGAGACCGTACTCGG 58 NA Drosophila melanogaster 61 CG3323 FBgn0029750 FBtr0070758 2 1 1 204 X 5199536 5199555 AGATACGCCAGTTAGATCGC 59 5199275 5199369 TTGCTGTTGTTAACGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15464 FBgn0029748 FBtr0299590 2 1 1 60 X 5081419 5081437 TGGAGGGCATCATACAGTG 59 5081461 5081479 GTCCAGATCCCACTTACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 2 4 4 91 X 4619145 4619164 CCAGCACTATGACTATCCCA 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 HLH4C FBgn0011277 FBtr0070691 2 1 1 151 X 4540465 4541348 ATAACTGCTCATTCAGCAGC 58 4540333 4540352 AGATAGTAGCGACTAAGCGA 57 NA InUTR Drosophila melanogaster 61 CG15577 FBgn0040904 FBtr0070660 3 1 1 60 X 4170762 4170780 GAGTTCTATCGCCAAGTGC 58 4170720 4170739 GTTTCAGAATGCCGTATTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 1 3 3 81 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037712 4037731 TCGCACATTACCACATAGTC 57 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 2 2 2 83 X 3791673 3795152 ACCTGAGTCTCGATGATGAC 59 3791609 3791633 GATCAATAATCTCCAAATCCGTCTC 59 NA Drosophila melanogaster 61 dm FBgn0000472 FBtr0070525 1 1 1 83 X 3270192 3270210 TCACCGATCACAGCTACAC 59 3270255 3278428 TTTCCTCATCGGAATCTGAGG 59 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 2 4 4 178 X 2816367 2816458 TTGGAGGAGAATTCGGTGG 59 2816600 2816618 GTTGAATCCAGGTCCACCT 59 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 1 2 2 89 X 2491033 2491362 TTATGTGGTCACCCAGGTG 59 2491415 2491433 ATCGCGAAGAAGCAATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 fs(1)K10 FBgn0000810 FBtr0070396 3 1 1 228 X 2137423 2137443 ACCTGATCAATCAGTATCCCA 58 2137633 2138503 TCTGACTTGGCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG42527 FBgn0260432 FBtr0300856 3 1 1 157 X 1896378 1896502 ATACCAGAGATCCAGGCTG 58 1896623 1896641 GTATCAGGACCAGGTGGTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG3857 FBgn0023520 FBtr0070349 2 1 1 60 X 1833019 1833037 ATTGCGTCTGATAAACGCT 58 1832977 1832998 TACATAGCCTTTGCAATGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vps26 FBgn0014411 FBtr0070311 3 1 1 94 X 1768277 1768295 TGCTGCTATTCTACGACGG 59 1768432 1768450 GATCTTAATGCCCTGGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454,FBtr0070308 3 2 2 112 X 1760519 1760607 ATAGCAAAGGGCTATATGTTCC 58 1760680 1760698 CTTTGTGAGATTGGCTCGT 58 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 3 3 3 95 X 1365550 1365568 TTACCATCATCCGACTGCC 59 1365627 1365699 TGAACAGAGACGAGATGGC 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 3 3 3 82 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270782 1270803 CACAATATAGTCGAACAGCTCC 59 NA Drosophila melanogaster 61 CG32812 FBgn0025642 FBtr0070206 3 1 1 88 X 1181960 1182040 CGATTGAGAATACTTGTAAGTCCC 59 1182087 1182105 GAGCTGACGACTTCCTACC 59 NA InUTR Drosophila melanogaster 61 CG16989 FBgn0025621 FBtr0070140 2 1 1 60 X 689857 689877 CTGGTATCTTATTTCCCACCC 57 689899 689917 CGTACCTTGAAGTTAGCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0070122 1 1 2 88 X 541547 541649 GAGGTGAAGAAGTGGAACG 58 541766 541784 AAGTCCATGATGTGGTTGC 58 NA Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979,FBtr0299977,FBtr0299978 1 3 3 60 X 149245 149263 ATTTGAGCAATCCTGCCCT 59 149287 149305 GTCATAAGTACGCTTGCGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3038 FBgn0040373 FBtr0070107 1 1 2 80 X 139600 139720 CGTAGAATGGATTCAAGCCA 58 139539 139559 GTTAGATGGATTCCTCTTCGT 57 NA InUTR Drosophila melanogaster 61 CG40625 FBgn0085503 FBtr0302234 2 1 1 70 U 5511352 5511370 TTCGAGAAGACTGGGACTC 58 5511403 5511486 CCTGTAGGTCCATTCTTGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 2 2 2 80 4 803970 803989 GTCAACAAATCGAGATCTGC 57 803853 803930 GGAGAATTCATTGAAGTGTCTG 57 NA Drosophila melanogaster 61 Ephrin FBgn0040324 FBtr0089078,FBtr0089075,FBtr0089077,FBtr0089076 3 4 4 83 4 596940 597612 TTAACGGAAACGATGACCAC 58 597655 597676 CACCACTATTATAGGTCAGCTC 57 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0089142 2 1 3 96 4 270759 270830 TTTACGACACAAAGTCGGC 58 270681 270701 ATATTAACAGAGCAAGCCAGG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377a FBgn0086665 FBtr0091751 3 1 1 68 3R 26033532 26033550 ACGTACATTAATGGCAGCT 57 26033482 26033502 GAAAGTAATGCAGTAACCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U1:82Eb FBgn0004183 FBtr0078851 3 1 1 65 3R 773850 773868 TAGTTCTAGTTGCGCCCTC 59 773803 773821 TACGCCAGGTAAGTATGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2150 FBgn0003065 FBtr0085859 2 1 1 63 3R 27590058 27590378 TTCTCAGTGTTCTTAGTGTTCG 58 27590016 27590034 TATATCCGGATGGTGGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11563 FBgn0039868 FBtr0085831 1 1 1 98 3R 27563233 27563251 GAAACCAGTCGTAGAGGAG 57 27563312 27563389 TTGGGTAATCTGAACTCTGG 57 NA Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085702 2 1 2 110 3R 26609358 26609669 TCTTCGTTCGAGAAGACCTG 59 26609742 26609760 CTTAAACTTCCGCAGCAGC 59 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 2 12 12 84 3R 26398250 26398334 ACATTAAGAACATCTCGGACGA 59 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 CG15528 FBgn0039742 FBtr0085591 1 1 1 94 3R 25875128 25875234 CCCAGAACTTTGTAGCTATTCAG 59 25875056 25875074 AAGGATCAGCGATGGAGTG 59 NA Drosophila melanogaster 61 Kul FBgn0039688 FBtr0085460 1 1 1 68 3R 25555264 25555344 TTGGATCACCACACGATCC 59 25555373 25555394 GGGCAAACATAATGAAGTTACC 58 NA DesignRelaxed Drosophila melanogaster 61 Obp99d FBgn0039684 FBtr0085455 2 1 1 60 3R 25540383 25540401 GAAGTGTCGCCAAGAAAGC 59 25540422 25540443 TTTCTTAACCAAACACCTCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085468 3 1 2 97 3R 25464820 25465961 CCAAATCGCAGAGATTCGC 59 25464741 25464759 TATGTAGGTCTGCTCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11470 FBgn0039671 FBtr0085471 1 1 1 60 3R 25415221 25415241 AATTGCACATCCCATATCAGC 59 25415181 25415199 CGGACCTGAGAAGGATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 2 3 3 87 3R 24975219 24975304 CATTTAGACAACCTTTCTGAGGAC 59 24975350 24975368 TGAAGTTCTCGTCCAGCTC 59 NA Drosophila melanogaster 61 CG14527 FBgn0039613 FBtr0085330 1 1 1 60 3R 24707632 24707650 GACAACATGATCTACCGCC 58 24707673 24707692 ACATGCTGTCGATTTCTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AR-2 FBgn0039595 FBtr0085316 1 1 1 100 3R 24569273 24569292 GAACATTACCCTGATTGCCA 58 24566691 24569210 TTGCATCGTAATCCACCAC 58 NA Drosophila melanogaster 61 CG33346 FBgn0053346 FBtr0302527 2 1 1 88 3R 24495452 24495538 CCAATTTAAAGTCAGATCGGC 57 24495585 24495606 ACTATTCATCTGAAAGGTAGCC 57 NA Drosophila melanogaster 61 CG34436 FBgn0085465 FBtr0112737 1 1 1 60 3R 24108436 24108455 GATGGCACTGGTCTTATTGC 59 24108475 24108556 AAAGTATTTGTGAATCAGGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL4 FBgn0003279 FBtr0085248 3 1 1 101 3R 23749455 23749873 TCCAGAAGGTGTACAAGTCG 59 23749937 23749955 CCTTGTCGTAGACCACCAG 59 NA Drosophila melanogaster 61 CG12883 FBgn0039538 FBtr0085216 2 1 1 60 3R 23505143 23505231 TTCGAGCAAGAACAAGACC 58 23505255 23505273 AGTCATGTTACTGCATCCG 57 NA DesignRelaxed Drosophila melanogaster 61 CG5612 FBgn0039529 FBtr0085200 2 1 1 80 3R 23449690 23449779 GCTATACTCGATCACTATGCC 58 23449630 23449650 CGTATAGTGACTGTACTCTGC 57 NA Drosophila melanogaster 61 CG6051 FBgn0039492 FBtr0113297 3 1 1 184 3R 22976132 22976150 TGGACACGTTTAAACGCTG 59 22954291 22954371 CACTTTGTCCTGATTCTGCC 59 NA Drosophila melanogaster 61 CG5880 FBgn0039489 FBtr0085108 1 1 1 80 3R 22943454 22943472 GAAATTGAGCCCTTGGAGG 58 22943514 22943598 ATACTCATTCGGATGTGTCAC 58 NA Drosophila melanogaster 61 CG14238 FBgn0039429 FBtr0085014 2 1 1 86 3R 22285270 22285288 TCATGCAGTTCACCATCGT 59 22285335 22285419 AGTCTGTATGTTCCTCCTTGTG 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0084909,FBtr0300819,FBtr0084910,FBtr0084911 2 5 5 86 3R 21711734 21712038 GCACAGCGATTATAGCCAC 59 21712088 21712106 GCTTTCCATCTGTGCATGG 59 NA Drosophila melanogaster 61 Mst57Db FBgn0011669 FBtr0084915 1 1 1 89 3R 21656590 21656608 CTTGTTCTGCTCTTTGCCG 59 21656519 21656539 GGGACTATTGATGTGGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tobi FBgn0261575 FBtr0084847 3 1 1 87 3R 21170772 21170851 GCAGTCTATCTATGATGAGTTCC 58 21170707 21170726 GTAAATGTCTCGCTTGGTGG 59 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113352 2 1 5 84 3R 21149767 21149785 CATGGGACAGGTGTTTGTC 58 21149633 21149721 CACGTCCTTAAGAGCTTTGAC 59 NA Drosophila melanogaster 61 CG34110 FBgn0083946 FBtr0110797 1 1 1 80 3R 20995828 20995910 GATGAGACAGTTTGAAGAAGAGG 59 20995770 20995788 ACCAGATATGGAGCCAGGA 59 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 1 7 7 138 3R 20897389 20897469 TGTGACTGTGATTGTGGCT 59 20897569 20897589 CCTTCGTCAGTAAGGATCCTC 59 NA Drosophila melanogaster 61 CG11839 FBgn0039271 FBtr0084766 1 1 1 80 3R 20895737 20895904 AAAGCCAGCATTGGTTTCC 59 20895946 20895966 ATCCTGCAAATAATGCAGGTC 59 NA Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 3 2 2 83 3R 20607106 20607179 GATGACTTCGCTAACGTGG 58 20607226 20607244 AAACAGATCGATGTCGTGC 58 NA Drosophila melanogaster 61 CG6607 FBgn0039204 FBtr0084644 3 1 1 146 3R 20355092 20355110 CCAAGTTGCGATCCTACGA 59 20355220 20355297 TACGCGTCGTAGTCAACTC 59 NA Drosophila melanogaster 61 CG5510 FBgn0039160 FBtr0084576 3 1 1 125 3R 19994673 19994691 TTTGGTACACAAAGGAGCG 58 19994513 19994584 ATGGATGTTGGTGGTTGTG 58 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084536 1 1 3 89 3R 19876650 19876669 ACAATTCCCGCTGATAAGAG 57 19877430 19877448 ATTGTTGCTTCCGTATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TfIIA-S FBgn0013347 FBtr0084526 3 1 1 74 3R 19716652 19716670 ATCAACTGTACCGCAACAC 58 19716540 19716614 TCTGGCCGTACTGAATCAG 59 NA DesignRelaxed Drosophila melanogaster 61 eIF4G2 FBgn0260634 FBtr0089623 3 1 1 80 3R 19639523 19639742 TCCTGAATCTGACATCAAAGAC 58 19639464 19639484 ATCTCTTCGTTGGCTAAATGC 59 NA Drosophila melanogaster 61 CG31414 FBgn0051414 FBtr0113405 3 1 1 82 3R 19530756 19530775 GCACCTACTGCGATTATCTG 58 19530820 19531080 TAAGCCATCCTTGCTGGAG 59 NA Drosophila melanogaster 61 CG31365 FBgn0051365 FBtr0084406 1 1 1 80 3R 18950904 18950991 CTATAACATCAAAGAAGACGGC 57 18950845 18950864 AGATTAAACACGACCACGTC 58 NA Drosophila melanogaster 61 CG13830 FBgn0039054 FBtr0302022,FBtr0302023 1 2 2 80 3R 18902693 18907083 ACGAGGAGTTGGACAACTG 59 18902631 18902650 ATGAGTAGGTCCTGTTGTCG 59 NA Drosophila melanogaster 61 rumi FBgn0086253 FBtr0084320 2 1 1 109 3R 18576191 18576209 GTTTGGTAGGAACAGGAGG 57 18576050 18576121 CTTGAAGCTAAATTCATCCTCG 57 NA Drosophila melanogaster 61 Gclm FBgn0046114 FBtr0084336 3 1 1 60 3R 18511591 18511609 ATGGAAAGGAAGGAGTGGC 59 18511549 18511567 AGGGCATATTGCTCCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31156 FBgn0051156 FBtr0084277 2 1 1 80 3R 18435197 18436458 CAACGTTGTGGAAAGTATTGTC 58 18435138 18435159 TTGATGCTAGCTATAAAGGCAG 58 NA Drosophila melanogaster 61 CG13847 FBgn0038967 FBtr0301711 2 1 1 107 3R 18252445 18252571 ATTATGTGAAGCAGGAGCC 57 18252356 18252376 CTTTCAACTGGTAGATCTGCT 57 NA Drosophila melanogaster 61 Gr93d FBgn0045468 FBtr0084158 2 1 1 180 3R 17671339 17671418 CATTGGATGAAATCGGTGGA 58 17671178 17671197 AAATAACATAGCGTCTGCGA 57 NA Drosophila melanogaster 61 CG3353 FBgn0038869 FBtr0084108 3 1 1 173 3R 17043634 17043654 CTTTCAAGACATTGATGGCCA 59 17043422 17043499 ATTCGCCAGCAAATTCTCC 58 NA Drosophila melanogaster 61 CG10824 FBgn0038865 FBtr0084028 3 1 1 60 3R 16985454 16985475 GAGAAACATAATGGATGTGCTC 57 16985415 16985436 GTAGTTATCCACGGTATAGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0084015,FBtr0113258,FBtr0084014 2 3 3 60 3R 16957777 16957795 TACCTGCTGCGATACTCAC 59 16957819 16957837 CCTTGGTGACAATGCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotZ FBgn0044809 FBtr0083974 1 1 1 114 3R 16703501 16703575 TCCGACTAAGCTTTGTTCTG 58 16703651 16703670 GATTGCTGACTTCGAATCTG 57 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0302323,FBtr0083944 2 2 2 107 3R 16417315 16417398 AAAGCTTTCTGGATCCTTCG 58 16417227 16417248 GACCCTTAACCTTAAGTGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 MtnC FBgn0038790 FBtr0083884 3 1 1 62 3R 16186185 16186203 ATTGCGCCTGTAATCAGGA 59 16186229 16186247 TGCAACACTGATCTTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 psidin FBgn0243511 FBtr0083829 2 1 1 80 3R 15851375 15851458 CCAGTTTAGAGATGCTATCGC 58 15851498 15851518 TCTTGGTCTTTGAGCTTACCT 59 NA Drosophila melanogaster 61 mira FBgn0021776 FBtr0083848 1 1 2 195 3R 15758700 15758718 AGCTATCTGGTGTTGCAGG 59 15758433 15758451 TCATGTCCACCATGTAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5217 FBgn0038694 FBtr0083741 3 1 1 93 3R 15073388 15073520 CCAATAAGGATGTTCAAGATCC 57 15073316 15073334 GATGTCTTAATCGTGGGCT 57 NA Drosophila melanogaster 61 CG3773 FBgn0038692 FBtr0083737 3 1 1 122 3R 15056142 15056216 AGAGTAAAGGAGGTTCGCA 58 15056302 15056320 GTAGTTGCGGAAGGATTCC 58 NA Drosophila melanogaster 61 gwl FBgn0260399 FBtr0083674 2 1 1 81 3R 14574146 14574167 AAGATAGATAACGCAATCGAGG 58 14574209 14574403 TTGAGATGCGATTTCGCTC 58 NA Drosophila melanogaster 61 Dlc90F FBgn0024432 FBtr0083575 2 1 1 70 3R 14125386 14125404 CTACTGGAACAACGACACC 58 14125437 14125456 AAACGATGCAGTACATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 2 2 2 98 3R 14113252 14113327 AAAGCTGTCCTATCAACCG 57 14113172 14113190 GTGGTCATCGCATACATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17801 FBgn0038550 FBtr0083525 3 1 1 83 3R 13632724 13632743 TTCTGTCACCTGAATCCCAC 59 13632603 13632683 CTGTTCTAACCATATTCCAGTGAG 59 NA Drosophila melanogaster 61 Hmx FBgn0085448 FBtr0273220 1 1 1 87 3R 13385844 13385862 ACTTATCACTCCGATCCCG 58 13385910 13391191 CGATATGAAACCCAATCTGGAC 59 NA Nonspecific Drosophila melanogaster 61 CG5823 FBgn0038515 FBtr0083505 2 1 1 132 3R 13358914 13358992 TGAGCTTCATGCTGGAGAG 59 13358800 13358818 ATCTCCGGAAACAGCTCAC 59 NA Drosophila melanogaster 61 Det FBgn0259784 FBtr0083408 3 1 1 123 3R 12975633 12975728 CATTTCGAAGATGGCCGAG 59 12975815 12975833 CTTCCACGGATCATCTTCG 58 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083350,FBtr0083347,FBtr0083349 1 4 6 123 3R 12484784 12536291 CTGGCTAGGTACAAATGGTC 58 12484680 12484698 CATCTCGATTCTCCGTCTG 57 NA Drosophila melanogaster 61 CG10311 FBgn0038420 FBtr0083324 1 1 1 82 3R 12177648 12177666 GTCTTCTTCATCGACGGCT 59 12176937 12177604 CAATAGGTCATAATCGCGCAG 59 NA Drosophila melanogaster 61 CG17930 FBgn0038416 FBtr0083271 1 1 1 87 3R 12153792 12153810 CAACCACGGTGATCATCAC 58 12153861 12153939 AAGAGAAGGGTAGCTGCTG 59 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 2 1 1 184 3R 11158534 11158736 GGGTTTGAACATGAAGCCT 58 11158368 11158386 TGCTGAAGTTCAGGTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3984 FBgn0038291 FBtr0083025 1 1 1 90 3R 10964312 10964330 CAGATGGTGACCATCCCTC 59 10964383 10964471 TGCAGTCGTAGAAGTTCTGG 59 NA Nonspecific Drosophila melanogaster 61 CG7265 FBgn0038272 FBtr0083009 2 1 1 61 3R 10719447 10719465 AGCGTAGATTGGATTCGCA 59 10719351 10719370 TAGTCGTCTGGGAATTGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33330 FBgn0053330 FBtr0301689 2 1 1 183 3R 10619600 10620259 TCGTTATACGCAATTTGGCC 59 10620400 10620423 GTATATTCGGTGTAGTACGAATCG 59 NA InUTR Drosophila melanogaster 61 CG7362 FBgn0038258 FBtr0083015 2 1 1 212 3R 10577776 10577795 TCCTGCGATATTGTACTCGA 58 10575269 10577604 TCTAGTACTGAAAGTGTATGCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG7886 FBgn0038248 FBtr0082976 1 1 1 80 3R 10455251 10455349 ATCCACAAACCAACATTGATCC 59 10455192 10455211 AGCGAGTATAGATCACTGGC 59 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 1 2 3 111 3R 10418462 10418480 ATTCTTGCAACGAGACCCA 59 10418554 10418734 GATTTGCTACTTGTTGGCGA 59 NA Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 1 2 2 90 3R 10132389 10132407 ATTTGGGTACACAGGTGGT 58 10132260 10132335 ATGTGAATGTTCAGCGTGG 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 2 5 5 80 3R 10090933 10090955 GATAACCTTGTAGTTGATGCCAC 59 10090815 10090894 CGAATAGCAATTCGGCTCAC 59 NA Drosophila melanogaster 61 CG31326 FBgn0051326 FBtr0082901 3 1 1 80 3R 10045402 10045420 ATTCCAACAATACCGCCCA 59 10045283 10045359 TGGCTTAGGATATACACCGC 59 NA Drosophila melanogaster 61 CG31326 FBgn0051326 FBtr0082901 2 1 1 80 3R 10045403 10045421 TATTCCAACAATACCGCCC 57 10045284 10045359 GGCTTAGGATATACACCGC 57 NA Drosophila melanogaster 61 CG3199 FBgn0038210 FBtr0082894 2 1 1 60 3R 9989068 9989087 ATCAAATGTGGCGATTATGC 57 9989165 9989185 TAAGGTTCCTGTCCAAATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9722 FBgn0038209 FBtr0082906 2 1 1 60 3R 9979291 9979309 TGTACCTCATCCTGTTGGC 59 9979249 9979272 GCAGTAAGTGAAACTATAACCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpII140 FBgn0003276 FBtr0082892 2 1 1 80 3R 9954982 9955062 AAGATTAATGCTCAGGTCTTCC 58 9955102 9955121 ACGAGAGTGAATCTTGTCGT 59 NA Drosophila melanogaster 61 CG14368 FBgn0038162 FBtr0082859 3 1 1 63 3R 9451180 9451199 AAGTCTTGTGTCTAGGCGAC 59 9451136 9451154 ATCCACATCCACATCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14369 FBgn0038159 FBtr0082789 3 1 1 60 3R 9418077 9418099 TATCCGTACAACTACTATGGCTC 59 9418039 9418057 AGTAGCCACTGCCATAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS21 FBgn0044511 FBtr0082764 2 1 1 62 3R 9207220 9207297 AAAGCCGTATCAGGTTCGT 59 9207176 9207194 TCCTCGTTGTAAATGGCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 3 2 2 80 3R 9125276 9125296 GATGAAGGATAAGCTTGTGGG 58 9125336 9125490 TTCGTCGTAGAAATGGTTCTG 58 NA Drosophila melanogaster 61 CG5724 FBgn0038082 FBtr0082657 2 1 1 123 3R 8566068 8566155 TTGTACAAGGAATTGTTCGGTG 59 8566239 8566257 GAACATTTGGTCGGATGGG 58 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 2 2 2 123 3R 8529518 8529600 CAAGATATCCGGTGCAACTG 59 8529686 8529704 GAACTCGTCAGAGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Dip-C FBgn0000455 FBtr0082597 3 1 1 60 3R 8238219 8238237 ACATAACCTGCACATTCCC 57 8238177 8238197 TTGTAGATGAACTTCTGGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5167 FBgn0038038 FBtr0082583 2 1 1 60 3R 8233259 8233278 GCCTACATGACGTATCCCTC 59 8233301 8233319 TGATAGAGGCGAAGAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD8 FBgn0010044 FBtr0082575 2 1 1 60 3R 8206263 8206281 TGGACTTCGATATAGCCCA 57 8206305 8206323 ACTTCCTTGGCATTCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17738 FBgn0038009 FBtr0082565 1 1 1 60 3R 8096819 8096837 GGATTTGGAGGACCTTTCG 58 8096859 8096879 CATAACCAAAGCCTCCAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp313a3 FBgn0038007 FBtr0082617 1 1 1 88 3R 8064464 8064482 TGCCTAAATAGGAGCTCGA 57 8064339 8064413 TCAACCCATTTAGATGCCTC 57 NA Drosophila melanogaster 61 Cyp313a2 FBgn0038006 FBtr0082618 3 1 1 80 3R 8062146 8062216 CATTACAGGGATCCAAGTGG 58 8062085 8062103 GAAGAAAGCTGAGCAACAC 57 NA Drosophila melanogaster 61 Pglym87 FBgn0011270 FBtr0082620 1 1 1 60 3R 8058307 8058326 CGTTCTCGAAGTCATCATCC 58 8058266 8058284 ACAATCCTGTACTTGCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3532 FBgn0037979 FBtr0113224 1 1 1 102 3R 7839888 7839907 CATGCTCAAGGAAGAATTGC 57 7839969 7840053 CGTAAGGAACTTTAAGAAGACG 57 NA Drosophila melanogaster 61 CG18643 FBgn0037898 FBtr0300901 1 1 1 97 3R 7255981 7256068 TGTTGAGTATCTTGTCCGGA 58 7256127 7256146 GCAGTTCTAGGTTCAGATCC 57 NA Drosophila melanogaster 61 CG5214 FBgn0037891 FBtr0082358 3 1 1 90 3R 7071375 7071472 GATATGAGCTATGCCATGGA 57 7071524 7071543 CGAAGATCGACATGAATCCA 57 NA Drosophila melanogaster 61 CG6693 FBgn0037878 FBtr0082367 3 1 1 60 3R 7046624 7046645 AGATCGTTCAGGATATGATTGC 58 7046585 7046607 TCCTCGGTAAAGATCTTGTACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ugt35a FBgn0026315 FBtr0082374 3 1 1 134 3R 6997998 6998084 AAATAATGGCGGCATTTGGA 58 6997883 6997903 TCAGTAAATCCTTTACAGCCG 58 NA Drosophila melanogaster 61 CG14686 FBgn0037832 FBtr0082274 2 1 1 98 3R 6605606 6605624 AACAAGACCCAGCCTAGTG 59 6605683 6605779 AGGATAACCATTTAGGGATCCG 59 NA Drosophila melanogaster 61 CG14686 FBgn0037832 FBtr0082274 1 1 1 98 3R 6605501 6605571 AGCCATAAGTTCTATGCGGA 59 6605632 6605650 ATCCTTCGTGGAAGCTGTC 59 NA Drosophila melanogaster 61 Bruce FBgn0037808 FBtr0082239 2 1 1 80 3R 6150241 6150259 GCCAACGTGATAATCGAGG 58 6150123 6150199 ATCATTGAGCATTTCCTCTCC 58 NA Drosophila melanogaster 61 CG34303 FBgn0085332 FBtr0112499 2 1 1 89 3R 5977396 5977414 GCTGTGCGAAATTAAGGCT 59 5977269 5977346 TGGATCTCAACCTCTGATATGG 59 NA Drosophila melanogaster 61 Crc FBgn0005585 FBtr0082103 1 1 1 96 3R 5456237 5456257 GGATCTACAGCAAACATCCTG 58 5455893 5456179 GTCTGAATGCCTTTGTCGG 59 NA Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082076 3 1 2 115 3R 5448767 5448840 CATGCTCCTCTTCTTGCAG 58 5448919 5448937 CTCGGATTATCGTAGACGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 tgo FBgn0015014 FBtr0082005 1 1 1 103 3R 4845606 4845625 CCAAGTACCTCTGTACACCC 59 4845380 4845398 TGTCCTGTATGTTCGCCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301245 3 1 2 77 3R 4635488 4635509 ACAAGATGTGGTCCTCTAAGAC 59 4635370 4635450 AAGTGAAACCGCATGATGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 1 1 1 88 3R 4632215 4632233 AACTCAGAGATGAGGCCTG 58 4632284 4632356 AACTATTTCCTGCTTCTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG11768 FBgn0037625 FBtr0302489,FBtr0081943 2 2 2 159 3R 4580266 4580284 TACTCCAATCGATCGGGAC 58 4580049 4580067 GAATGGGCAGATCAATGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG11760 FBgn0037615 FBtr0081907 3 1 1 74 3R 4545263 4545283 AGACGATCCGATTGATAATGG 57 4545534 4545552 TGAAGACCGACAGTATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Or85d FBgn0037594 FBtr0081872 1 1 1 85 3R 4379497 4379516 TATTAAGAGGGCCCAACAGC 59 4379564 4379643 GTTGCAAGAGATCCGACAC 58 NA Drosophila melanogaster 61 CG11671 FBgn0037562 FBtr0081829 2 1 1 94 3R 4113878 4113896 CTGATCGGAGGACTACTGC 59 4113951 4114029 TTGAAATTTCCCTCCGTAAGTC 58 NA Drosophila melanogaster 61 CG7800 FBgn0037552 FBtr0081795 2 1 1 60 3R 4044792 4044810 ACTTCGATTCGCCAATTCC 58 4044832 4044852 ATTCTATTGTACGAAGCGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081759 1 1 3 105 3R 3761559 3761577 TATCCTTGGGAGCTGATGC 59 3756392 3761493 GATTTATTTCCACTCGAGCCTC 59 NA Drosophila melanogaster 61 CG10086 FBgn0037517 FBtr0081744 1 1 1 103 3R 3618429 3618607 CGTACCAGATTTACCTCCTCC 59 3618672 3618690 GAGTAAATCGGGAGGCCTC 59 NA Drosophila melanogaster 61 Mst84Db FBgn0004173 FBtr0081586 3 1 1 111 3R 3191218 3191236 GGAACCATCATGTGTTGCG 59 3191125 3191143 AAGGACTACAGCAGGAACC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Gld FBgn0001112 FBtr0081596 1 1 1 97 3R 3083201 3091095 TCTACGATCTCTATCAACATGTCC 59 3083127 3083145 CTACCACCACATGTGGAGG 59 NA InUTR Drosophila melanogaster 61 CG14609 FBgn0037483 FBtr0081573 3 1 1 82 3R 3028031 3028113 TTTATCCACGAATGAAGAGCC 58 3028155 3028175 CATTTCATGAGCCAACATGTC 58 NA Drosophila melanogaster 61 CG1979 FBgn0026563 FBtr0081628 3 1 1 81 3R 2883462 2883481 AAAGACGATGATGACTGCGA 59 2883520 2884149 GAATTATAGAGAACGAGAGCTGAC 59 NA Drosophila melanogaster 61 Ccp84Ag FBgn0004777 FBtr0081689 2 1 1 143 3R 2512463 2512483 ATTCGGTATCTAGAGCAACCC 59 2512803 2512821 ATCGTACTCCTCAACCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sunz FBgn0037462 FBtr0081681 3 1 1 111 3R 2456312 2456388 GCATTTGAGGTTTATACAAGCG 58 2456460 2456478 GCAATTCGTTGACCTCGTC 59 NA Drosophila melanogaster 61 Osi7 FBgn0037414 FBtr0078597 3 1 1 68 3R 2075260 2075278 TCAGCAGCTTCCTGAACTC 59 2075310 2075328 TAACAGCCTGCACAATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 3 3 3 85 3R 1468679 1468756 ACATCACACTGTTTCACGC 59 1468612 1468630 AGTGGAAGGAACTAGCGAC 59 NA Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0078740 1 1 2 168 3R 1448402 1448480 TTAGACTTAACATGCCCGAC 57 1448253 1448271 TTGAAGTCACTGTTCTGGG 57 NA InUTR Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 CG34425 FBgn0085454 FBtr0112726 2 1 1 60 3R 330830 330848 CATGAAATGATTGCGTGCC 58 330788 330808 CCTTTATTTGTGCATCCAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 2 4 4 89 3R 293415 293433 TCTACTACATGATCGCCGC 59 293285 293365 CGAATTGAACCATTTGGAAGGT 59 NA Drosophila melanogaster 61 CR32205 FBgn0052205 FBtr0075000 2 1 1 161 3L 19416412 19416486 TTAAATCCGACGTCCTTGTC 58 19416270 19416289 ATAACCTGATAACTGGCAGC 57 NA Drosophila melanogaster 61 CG41452 FBgn0084015 FBtr0111175 1 1 1 134 3L 23019162 23019180 CTCGGGATAGTCAACGGAG 59 23019277 23019416 TGTAGGTTACACTTCCGCTG 59 NA Drosophila melanogaster 61 CG32454 FBgn0260481 FBtr0078529 2 1 1 60 3L 22724215 22724233 TTGACTATCCCTTCGCTCC 58 22724255 22724275 TCGGGAATAGAGATTGACAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7166 FBgn0037107 FBtr0301161 1 1 1 80 3L 21615494 21615514 AACTTGACGTGGACAATTGAG 59 21615373 21615455 GGTTTCATTCATCAACAAACGG 59 NA Drosophila melanogaster 61 CG7172 FBgn0037102 FBtr0078377 3 1 1 60 3L 21561629 21561648 AAGATTTGCTTCGATTCCCA 57 21561588 21561609 GTGTTTCTAGTTGCATAACCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12971 FBgn0037078 FBtr0078402 2 1 1 91 3L 21349323 21349583 GGCTTAAAGCGAAGGTCTC 58 21349250 21349268 GATGTATGGCTGTGAAGCG 59 NA Drosophila melanogaster 61 CG12972 FBgn0037076 FBtr0078403 1 1 1 80 3L 21339165 21339796 CCAAAGGGATCAAATCCCG 58 21339103 21339123 CGTCATAGTAACGGATTACGG 58 NA Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 1 3 3 80 3L 21257017 21257035 TCAATGAGGCGACATTGAC 58 21257073 21257155 CAAAGTCAGAATCGTAGAGTATCTC 59 NA Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456 1 1 2 82 3L 21190338 21190415 AACACATGATCTCCCACCA 58 21190461 21190479 AACTTTGGGCCAGTTTAGG 58 NA Drosophila melanogaster 61 CSN3 FBgn0027055 FBtr0078269 2 1 1 115 3L 20833660 20833679 TGTACTTCTTCGAAGTCTGC 57 20833493 20833582 ATACGCTATCTTGCCTTCG 57 NA Drosophila melanogaster 61 knrl FBgn0001323 FBtr0078212 3 1 1 132 3L 20595359 20610496 CCATATGCGATGAATCAGACG 59 20593035 20593053 AGTCGGATATCGACGACAG 58 NA Drosophila melanogaster 61 CG13247 FBgn0036979 FBtr0078184 3 1 1 97 3L 20364297 20364320 CTTACTATTGGAAGTTGGAGAACG 59 20364375 20364463 CAGGGACTTGCCTTTAAAGC 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 1 3 3 80 3L 19809756 19809833 AAGGAGATTAAGCACCTCGT 58 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 CG14104 FBgn0040786 FBtr0299563 1 1 1 60 3L 19800181 19800199 TGAAACGTCAGAGGGTCAG 59 19800139 19800157 TAGGTCGTTGTACTCGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075045 3 1 4 60 3L 18986006 18986027 CCGCTTAGAGAAACTTTATCAG 57 18985967 18985985 CGAGATTAGTCGATGACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11619 FBgn0036836 FBtr0075046 3 1 1 60 3L 18980160 18980179 ATTGGATGTGGGATACCGAG 59 18980119 18980140 CGTAAGACTCGTTGAAGATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6856 FBgn0036819 FBtr0075062 3 1 1 97 3L 18861699 18861717 CTTCCGGGAGGATATGGAG 58 18861836 18861854 CTTCAAGGACGACTTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 2 1 1 153 3L 18716232 18716305 CCAATCCAATAGAGCAGCA 57 18716097 18716115 GTAGCAGCCTTGTAGTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mus304 FBgn0002901 FBtr0075122 1 1 1 95 3L 18103566 18103584 GATTGAAGCCCTTAAGCGG 59 18103641 18103740 AGTAAGGAAACCTCACCAGAC 59 NA Drosophila melanogaster 61 CG5147 FBgn0036775 FBtr0075136 1 1 1 80 3L 18101618 18101689 ACACTTAAGGACACTTTGGC 58 18101557 18101575 AGGTTCCTCTAAACTGGCT 57 NA Drosophila melanogaster 61 CG13698 FBgn0036773 FBtr0075137 2 1 1 90 3L 18083168 18083186 TCTCATCCAGGGAGAAGGT 59 18083031 18083114 ATGATGGCCAGTACACCTC 59 NA Drosophila melanogaster 61 CG32176 FBgn0052176 FBtr0075218 3 1 1 121 3L 17427322 17427340 CTGGAGGAGTTACTCTGCT 58 17427423 17427503 GAGATGTGTTCTTCTTTGTGC 57 NA Drosophila melanogaster 61 CG6512 FBgn0036702 FBtr0075251,FBtr0075252 1 2 2 116 3L 17233851 17233869 GATATGATGGGTGGAGGCC 59 17233699 17233771 GGCAACATCCTTGAAACCC 59 NA Drosophila melanogaster 61 CG13028 FBgn0036676 FBtr0075261 3 1 1 60 3L 16916527 16916545 GAAGCGAATTCCCAAGCAC 59 16916567 16916587 GTTTGAATTCCAGGTAACCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13025 FBgn0036660 FBtr0075346 2 1 1 80 3L 16771358 16771380 GAGGTGGAGTTTATATCTACGAC 58 16771239 16771320 CAGGACTTAAGTTCACTTCGG 58 NA Drosophila melanogaster 61 PGRP-SB1 FBgn0043578 FBtr0075348 2 1 1 86 3L 16720952 16721038 TGCTGCTTAGCTCTATCCG 59 16720884 16720903 AATCCTAGAAGGCGATCGAG 59 NA Drosophila melanogaster 61 Rpn12 FBgn0028693 FBtr0075308 3 1 1 60 3L 16576460 16576481 GTGCTATTACTATGACTACGCT 57 16576500 16576520 GAGCAGCTTATACTTGCTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13041 FBgn0036605 FBtr0075432 1 1 1 60 3L 16312473 16312552 AATTTGTTGCTGTCATCGCT 59 16312432 16312450 TGAGTCTCGATGAGACCAG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG13070 FBgn0036586 FBtr0075462 2 1 1 60 3L 16257060 16257081 TGGTAACATTACATTCACCCTG 58 16257100 16257120 ACTGATGCTATTGAACACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5235 FBgn0036565 FBtr0075497 2 1 1 108 3L 16082942 16082961 ACTACGATGTCCTAGATGGC 58 16082798 16082871 AACGTATCAGCGGAGAGTG 59 NA Drosophila melanogaster 61 CG17029 FBgn0036551 FBtr0075514 3 1 1 81 3L 15970584 15970603 CTATTCTCCGCCTACAAGGG 59 15970647 15971064 CTTGCTTGATCGTCGTCAC 59 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 3 4 4 91 3L 15964326 15964404 TACCATTCTAGGTCGAGGC 58 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 elgi FBgn0036546 FBtr0075510 2 1 1 80 3L 15950099 15950119 ATCGAAATTCCCTGACTACTG 57 15950161 15950252 AGGTGATTGACAGTCTGGA 57 NA Drosophila melanogaster 61 CG6244 FBgn0036531 FBtr0075502 2 1 1 112 3L 15801530 15801548 AAGTCCAAACGCAAAGGAG 58 15801621 15801695 GCCTTATCTAGTTTCGCTTCAC 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075601 3 1 3 81 3L 15514424 15514504 CCCAAATGTTCTGTCCACC 58 15514361 15514382 TTTCATCTTCGGAATTCAAGGG 59 NA InUTR Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 3 2 2 92 3L 15010306 15010382 CAAGTCAGTGGAGATTTGGG 58 15010233 15010251 TGCGGCAAATAGTTCAAGG 58 NA Drosophila melanogaster 61 NHP2 FBgn0029148 FBtr0075698 3 1 1 80 3L 14794991 14795010 ATGAAGCACAAGACTTTCCT 57 14794870 14794948 GATGCAAATGCCAGTTTCG 58 NA Nonspecific Drosophila melanogaster 61 CG13476 FBgn0036441 FBtr0075686 1 1 2 92 3L 14698843 14698861 CCAATGTTATGGGCTACGA 57 14698916 14699046 TTGGATATTGATCCAGGTCG 57 NA Drosophila melanogaster 61 CG8100 FBgn0036410 FBtr0075779 3 1 1 82 3L 14076897 14076916 CTTTGCTTCACGAGGAACTC 59 14076961 14077078 ATATCTCCAGGTGCCTTCC 58 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 1 3 4 103 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13462076 13462095 CATGTATGGCGATGATGTGC 59 NA Drosophila melanogaster 61 CG10688 FBgn0036300 FBtr0075961 1 1 1 60 3L 12528325 12528343 CATGGTTGGGACAAGACCT 59 12528365 12528385 TTTCCTTGAACTTGTAGTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0300028 3 1 2 215 3L 12527096 12527173 GTCAACCAGCTAAATGGCAG 59 12527348 12527369 TCTTAAGTGTAGCATAACAGGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10654 FBgn0036294 FBtr0075971 1 1 1 80 3L 12500374 12500393 AGCAACGAGTCCACTAATCC 59 12499573 12500334 TACGTAGACTTCCTCAATCTCC 58 NA Drosophila melanogaster 61 CG10681 FBgn0036291 FBtr0075957 3 1 1 98 3L 12495016 12495034 GTGGAGACCATGATACGGG 59 12495151 12495170 CAAACGACTCTGCGATAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32104 FBgn0052104 FBtr0075986 2 1 1 80 3L 12390203 12390224 GCTAAGGGTATTTCCAAAGGAG 58 12390079 12390164 CACCATCTGGACCTTATTGTC 58 NA Drosophila melanogaster 61 CG10426 FBgn0036273 FBtr0076007 2 1 1 85 3L 12273951 12274030 CAGGAACCGATGCAATTCC 59 12274078 12274097 TTGGTTATTCAAGCGTCGAC 59 NA Drosophila melanogaster 61 CG11529 FBgn0036264 FBtr0076005 2 1 1 60 3L 12191677 12191695 TAGTGGTGGGCATAACCAG 59 12191718 12191737 CCTCCGGGAATATTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11560 FBgn0036249 FBtr0075993 1 1 1 112 3L 12113585 12113603 ATTCTACGCAGTGTGAGCA 59 12113678 12113763 TGATTTCAGAGTCTGCTCCT 58 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0110780 3 1 3 172 3L 11814811 11814946 CGTTGAAAGCAATTTGTCAGTG 59 11814660 11814680 CAGTGCAAGCATTTAGTTCTC 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5964 FBgn0036206 FBtr0076085 1 1 1 83 3L 11784920 11784938 ACTATGAGCAGGAGATCGA 57 11784790 11784808 TCTCTACGACGGACAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Ir68a FBgn0036150 FBtr0076185 1 1 1 80 3L 11228367 11228385 TTGCTAATTGGGAGTTGGG 57 11228208 11228325 AAGAGGTTCCGAATAAGTTGC 58 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0113420,FBtr0113418 3 2 5 101 3L 10580773 10580946 AATCTACGCTTCCAGGCAG 59 10582470 10582488 AGACAGCGGAGTCTTTAGC 59 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 1 1 2 159 3L 10405985 10406063 CTCCAATACGATTCGTGGC 58 10406186 10406204 ATGTGAGTGAGAAGCGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 2 3 3 102 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143509 10143527 ATCCGCATCGTAAATGAGC 58 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698,FBtr0076500,FBtr0076501 1 4 4 91 3L 9346923 9346999 TCATTCAGGAAGAGGGTCC 58 9346850 9346868 GGGCGACTTAAGATTCGAG 58 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076432,FBtr0076435,FBtr0076433 1 4 4 144 3L 9330633 9330651 CCTTTATGGGCGACTATGG 57 9330758 9330842 CTTCTGGTCACCTTAGTCTG 57 NA Drosophila melanogaster 61 CG32024 FBgn0052024 FBtr0076580 2 1 1 101 3L 8801204 8801223 TCCCAATGATTTAAGCTGCC 58 8801345 8801369 CTGAAGTATGGTTTACTTGAAGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr66D FBgn0052029 FBtr0076567 3 1 1 90 3L 8633864 8633882 AGGATCAAGGATACGGTGG 58 8633932 8634023 GCTGATATTGCTGATAATCCCTG 59 NA Drosophila melanogaster 61 CG13667 FBgn0035890 FBtr0076610,FBtr0076611 1 2 2 60 3L 8399639 8399661 GACTTAGTGGCTTATGTGAACAG 59 8399680 8399699 GGAAATCCTCCAGAACCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 1 2 2 80 3L 8372408 8372963 GTTTGTCATCCCAGCTCCT 59 8373007 8373025 CCAGACAACTGCTATTGGC 58 NA Drosophila melanogaster 61 Cpr66Cb FBgn0035875 FBtr0076601 3 1 1 115 3L 8330822 8330841 AAATCGAACGCATCTCACTG 59 8330917 8331020 GGGAGGAGCATAGTAATCCAC 59 NA Drosophila melanogaster 61 CG7194 FBgn0035868 FBtr0076714 3 1 1 110 3L 8297003 8297022 ATATACCAAGGAAGCCGAGG 59 8296581 8296934 AAGTAACTTCCTCCAAGACTGAG 59 NA Drosophila melanogaster 61 CG7197 FBgn0035866 FBtr0076715 3 1 1 60 3L 8292042 8292060 CAACATGAGGATCTGAGCA 57 8292000 8292020 CCTTGAGATCCTGCTTATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 msk FBgn0026252 FBtr0076685 1 1 1 80 3L 8112574 8112593 ATGTCCTGCTTAACTTGCAC 58 8112630 8112716 CCTCATAGAAGTCAGTTATGTTGTG 59 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0100225,FBtr0076811 1 2 2 80 3L 7755271 7755289 GGACAACTGTGGATTCCGA 59 7755333 7755409 GTGAAACCTGTGCAATCCC 59 NA Drosophila melanogaster 61 CG32377 FBgn0052377 FBtr0076820 3 1 1 60 3L 7677023 7677044 CCACTAGACAAACCTATTAGCC 58 7676984 7677004 CCATACCAAATGTAACACCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7492 FBgn0035807 FBtr0076821 1 1 1 97 3L 7646628 7646646 CATTAGCCAGTATGCTCCG 58 7646489 7646567 AATGTACTTCACCCGTTGC 58 NA Drosophila melanogaster 61 CG8541 FBgn0035788 FBtr0076862 3 1 1 60 3L 7464935 7464956 TACACTCCTGCTATTAAGACGA 58 7464975 7464995 GAGTAGCCTGAGTGTACAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8546 FBgn0035785 FBtr0273394 3 1 1 80 3L 7450153 7450232 AGCGGAAGGTATTATTCCCG 59 7450271 7450293 CTATAACCATCCTCCACATTCCA 59 NA Drosophila melanogaster 61 CG8605 FBgn0035762 FBtr0076838 1 1 1 80 3L 7317837 7317913 GACTACAATCTCAGGCTGG 57 7317956 7317975 AATCTGTTCTATGTCCACCG 57 NA Drosophila melanogaster 61 G-ialpha65A FBgn0001104 FBtr0076934 3 1 1 81 3L 6966737 6966757 CAAGAAGGATCTGTTTGAGGA 57 6966620 6966694 GAAGGTGTTGGTTCCTGTG 58 NA Drosophila melanogaster 61 CG10103 FBgn0035715 FBtr0076949 3 1 1 80 3L 6749371 6749391 GGAAATAGCCGACTATTTGGC 59 6749247 6749333 AAGTAGTCCTCCCTAATGATGTG 59 NA Drosophila melanogaster 61 BG642312 FBgn0047334 FBtr0091954 2 1 1 81 3L 6225865 6225948 TAGTTATCTGCGTGATCGGT 58 6225803 6225822 TGTCGATATCGATCCTCGAG 58 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 1 3 3 80 3L 6187186 6187206 AGATCATAGCGATCCTCAAGG 59 6187245 6187333 TGAATTCCTCCAGTTTCATCTG 58 NA Drosophila melanogaster 61 CG13297 FBgn0035685 FBtr0077020 3 1 1 80 3L 6149991 6150204 GATGGATACGAGTTCAACTACAC 59 6149933 6149951 AGCTGAAGTTCCACTCAGG 59 NA Drosophila melanogaster 61 Lcp65Af FBgn0020639 FBtr0077057 1 1 1 106 3L 6129667 6129744 AACTATGGCTACGAGACCAG 59 6129580 6129600 AAGGAATAGGTACCCTTGACG 59 NA Drosophila melanogaster 61 Lkr FBgn0035610 FBtr0077149 2 1 1 81 3L 5508765 5508855 AAGATTTCGCGAGAACAATGAG 59 5508705 5508726 TTGCAATTGATCATCGGATAGG 59 NA Drosophila melanogaster 61 Rh50 FBgn0028699 FBtr0073354 3 1 1 109 3L 4910854 4912681 AATATCCGCAGTTCCAGGA 58 4912754 4912772 CATGAACAGGGTGAATCCG 58 NA Drosophila melanogaster 61 CG33777 FBgn0053777 FBtr0091778 1 1 1 80 3L 4554688 4554770 TACCTGTCCCTTTAATGACGA 58 4554628 4554648 GGGAGTACTGAAGTTACTTGG 57 NA Drosophila melanogaster 61 Syx17 FBgn0035540 FBtr0073293 2 1 1 88 3L 4404125 4404143 GATCTGGAACGTTTCGACG 59 4404195 4404274 GATTTGAGTTGGAGCTCCG 58 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 1 3 3 91 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 3 2 2 123 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191881 4192204 CTTGCTCAAGTTTCCTTGC 57 NA Drosophila melanogaster 61 Teh4 FBgn0035504 FBtr0301645 2 1 1 80 3L 4175923 4176020 AGTGCTACTATAACAAGGACTC 57 4175864 4175883 CTAGAAGCTCCCTGTAAACC 57 NA Drosophila melanogaster 61 Rcd5 FBgn0035489 FBtr0073202 1 1 1 131 3L 4041686 4041764 TTAAGAGCTCGGAACAACCA 59 4041858 4041876 ACAGGGTGTACTGCTTGAG 59 NA Drosophila melanogaster 61 CG11593 FBgn0035488 FBtr0114509 3 1 1 82 3L 4038863 4038887 GATGACTATGTGCTAATCTATCTGC 59 4038744 4038825 TGATAACACCGTTTAAGCCAG 58 NA Drosophila melanogaster 61 CG1134 FBgn0035483 FBtr0073193 2 1 1 81 3L 4022490 4022508 GAGTCGTCCTCACACTCTG 59 4022550 4022838 ACATGGCAGTAGGATAATCTCC 59 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 3 1 1 69 3L 3471960 3471979 AGTCCGCTTCAATTTCATCC 58 3471840 3471928 CTTCAGGACTATGGGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0073076 3 1 2 77 3L 3376885 3376903 CAGATACCCGTAAAGACGC 58 3376944 3377013 CTATCAGCCGGGAATCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 dro3 FBgn0052283 FBtr0073060 1 1 1 60 3L 3315072 3315093 AATGACCATTGTCCTAATGGAG 58 3315113 3315132 AGTTCCAGATAGGCAATCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14950 FBgn0035364 FBtr0273408 3 1 1 83 3L 2657664 2658224 TTAAGTACCAGAGCTCGGAC 59 2657600 2657618 CTTGGTTGTGTTCGAAGCC 59 NA Drosophila melanogaster 61 CG42303 FBgn0259199 FBtr0299683 1 1 1 80 3L 2653598 2653617 AACACAATCACCTTGTCCCT 59 2653655 2653738 GTCTGGTGTGGTTACATATTTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 2 1 1 108 3L 2475116 2475197 AATGTCATGCCAATGTGGG 58 2475026 2475044 AGATCTACCACTCGGTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 yellow-g FBgn0041709 FBtr0072902 3 1 1 133 3L 2272355 2272375 GCAAGGTCAATCTAAAGAAGG 57 2271131 2272261 CAGAAGTCCATTCTGATCGA 57 NA Drosophila melanogaster 61 CG32302 FBgn0052302 FBtr0072881 2 1 1 60 3L 2269580 2269604 CTTCCAAATTGATCCTAAGATCCTG 60 2269621 2269640 GTCCGAGCACTGATAGATCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11814 FBgn0035296 FBtr0072855 3 1 1 80 3L 1951225 1951300 ATATGGGATCTCAATGACTGG 57 1951165 1951185 CACATGTGTTATTGGAGACTG 57 NA Drosophila melanogaster 61 CG1887 FBgn0035290 FBtr0273261 3 1 1 93 3L 1894385 1894405 AATCTTAAAGTGACACGTGCC 59 1894254 1894330 CAGAGATGCCCTCTTCCAG 59 NA Drosophila melanogaster 61 SA-2 FBgn0043865 FBtr0301788,FBtr0301789 2 2 2 82 3L 1435039 1435058 TACTTGAAAGTGGTGTGCCT 59 1434912 1434994 GGAGCGTGGTACTTTACGT 59 NA Drosophila melanogaster 61 Vti1 FBgn0260862 FBtr0072607 2 1 1 69 3L 692709 692728 AATAACGGCCCATATTGGAC 58 692595 692613 CTTGCTGCACAAATCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32483 FBgn0052483 FBtr0072608 3 1 1 112 3L 689257 689275 AGTGGGAGGTGATGAAAGC 59 689110 689182 ATACAGACGTTCTTCGGAGG 59 NA Drosophila melanogaster 61 CG7049 FBgn0035102 FBtr0072537 3 1 1 60 3L 175279 175298 GTGTCACAAGTCCTACTGCT 59 175238 175256 GTCTTCTGTGTTCTGCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1820 FBgn0026169 FBtr0072259 2 1 1 60 2R 20063754 20063773 CCATGATATTAAGCCGGCAG 59 20063795 20063814 TCCCAATCATAGTCACAGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33449 FBgn0053449 FBtr0086441 1 1 1 60 2R 15618269 15618287 ATACATCGGTTCTCGTCCG 59 15618227 15618245 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Phk-3 FBgn0035089 FBtr0072404 3 1 1 127 2R 20858830 20859307 CGGAAGAGAAATAATCCTCCA 57 20858723 20858741 TTCATCCACGTTGACACTG 58 NA InUTR Drosophila melanogaster 61 CG12851 FBgn0035086 FBtr0300763 1 1 1 80 2R 20840455 20840475 TAAAGCGCAAGGTATACAAGG 58 20840516 20840587 GTCCGTTTGAATCCAATTCG 57 NA Drosophila melanogaster 61 CG3880 FBgn0035057 FBtr0072371 2 1 1 132 2R 20649660 20649734 ACCCGATTTGATCAGTGGT 59 20649830 20649848 TAATGTGCAGTGGGTAGCC 59 NA Drosophila melanogaster 61 nord FBgn0050418 FBtr0072263 3 1 1 97 2R 20132450 20132470 GCAAGATGCTAAAGGACTTCG 59 20132529 20140178 CAGCACAAATCGCTTCCTC 59 NA Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 2 2 2 80 2R 20012441 20012462 AATAATGTTCGACGAGCATCTG 59 20012324 20012401 CTAACGTAGTCCCTGATGGG 59 NA Drosophila melanogaster 61 CG2812 FBgn0034931 FBtr0072140 3 1 1 80 2R 19813671 19813689 TCATACTGGCCACATCCTG 59 19813731 19813816 AAACGTATCGTTTGATCCTGC 59 NA Drosophila melanogaster 61 CG13561 FBgn0034906 FBtr0072243 3 1 1 81 2R 19692100 19692121 TCCCTTCATTAACATCATCCTG 58 19691979 19692058 CAACACTATTTCCGGTGGA 57 NA Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072102 1 1 4 134 2R 19496194 19502203 GAACGCAGTTGCTGTAAGG 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA InUTR Drosophila melanogaster 61 CG10332 FBgn0260455 FBtr0072109 3 1 1 91 2R 19489000 19489086 GGATCTGCAAACAGAACGC 59 19488927 19488945 TCAGGTCGGTTAGATTGGC 59 NA Nonspecific Drosophila melanogaster 61 Gr59e FBgn0041233 FBtr0072115 3 1 1 60 2R 19428994 19429013 GTCGTATCTGGTTCATCCTG 57 19428887 19428973 CAAAGGTTACATTTCTGCTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CG30265 FBgn0050265 FBtr0071891 2 1 1 81 2R 18720518 18720536 ACTGAATGTGGGAGTAGCC 59 18720579 18720660 CAGAGTCCAATCGTATTCTGG 58 NA Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0071921 2 1 2 85 2R 18589998 18590931 AAAGTGGGATGCAACTACAG 58 18589932 18589950 AACACCCTGATACTCCTGC 59 NA Drosophila melanogaster 61 NtR FBgn0029147 FBtr0071762 3 1 1 83 2R 18016975 18017059 TATTTGCCGTTGATTGCCTG 59 18017103 18017123 GATGAGAATGAGGGAACTCCT 59 NA Drosophila melanogaster 61 CG13494 FBgn0034671 FBtr0071733 2 1 1 80 2R 17842219 17842237 AAACATCCTCATGGAGCAC 57 17842157 17842175 TAATACCGACAGCCATGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30285 FBgn0050285 FBtr0071678 3 1 1 129 2R 17575974 17575992 TTTCATAGTGAGCACGCTG 58 17575795 17575814 GTAGGGTCCTTCGTTCTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42365 FBgn0259711 FBtr0299964 2 1 1 60 2R 17554567 17554589 TAAGCAGGATTCTACTGAAGACC 59 17554608 17554627 GCTGGATTAAACTTCGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0089602 1 1 3 173 2R 17099824 17099843 GTGAAGACCGTTTACGATCC 58 17099979 17100064 GATGGTCACTTCCTCCTCG 59 NA Drosophila melanogaster 61 CG9406 FBgn0034592 FBtr0071570 2 1 1 85 2R 17030212 17030230 GATTCCGTCGACTATCCAG 57 17030279 17030349 GGTTCCATTTGTCGATCCA 57 NA Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 2 2 2 103 2R 17012644 17012662 ACCTGGCGAATCTCATAGC 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 2 1 1 61 2R 16948710 16948788 AAATCAAACCGGATTCGGA 57 16948811 16948831 AACTATGCCTTCCGTATTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 cpa FBgn0034577 FBtr0071532 2 1 1 102 2R 16945755 16945894 CACAACGATCTGGGAAACG 59 16945960 16945978 CCTCTACGTCCTGGTAGTC 58 NA Drosophila melanogaster 61 Pros29 FBgn0261394 FBtr0071522 2 1 1 154 2R 16882806 16882962 CTGAACGACAACATGGTCTG 59 16883079 16883097 TGTTTGATGTCGCAGAGGT 59 NA Drosophila melanogaster 61 Act57B FBgn0000044 FBtr0300946,FBtr0071519 2 2 2 134 2R 16832900 16832918 GGCTACTCTTTCACCACCA 59 16833016 16833034 CTCGTACGACTTCTCCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9090 FBgn0034497 FBtr0086303 1 1 1 82 2R 16167937 16168501 CACTTTGAAGCACTTCTCTAAGG 59 16167877 16167895 GTGAATGGCGACTTGAACG 59 NA InUTR Drosophila melanogaster 61 CG8517 FBgn0034472 FBtr0086329 3 1 1 93 2R 15601833 15601851 TTGTGGACTTTCATGCCAG 58 15601969 15601987 AATCTCACTCGACCTTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 3 6 6 125 2R 15418200 15419689 CTATTGAGGGTAAAGGCACCA 59 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 Ir56b FBgn0034456 FBtr0086465 1 1 1 119 2R 15396394 15396412 CATCGTTATCCACGACTCG 58 15396546 15396564 AAGAACAACCAGGCATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11007 FBgn0034455 FBtr0086464 3 1 1 62 2R 15390751 15390769 TCCTGGCCATATCGTACCT 59 15390794 15390813 GAATAAATAGGCGGGTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11007 FBgn0034455 FBtr0086464 1 1 1 61 2R 15390751 15390769 TCCTGGCCATATCGTACCT 59 15390794 15390812 AATAAATAGGCGGGTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5335 FBgn0034365 FBtr0086708 3 1 1 87 2R 14509313 14509331 CTGGCAATCTATCGCATCC 58 14509382 14509517 TTAATGTGGAACCTGGCTG 57 NA Drosophila melanogaster 61 GstE1 FBgn0034335 FBtr0086669 2 1 1 60 2R 14285952 14285975 ATTGTACTCTATGGGACAGATCTC 59 14285992 14286012 CCTTTAGGGTAAGTTTGACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18536 FBgn0034322 FBtr0086758,FBtr0299902 1 2 2 86 2R 14182694 14182768 GAAACGATGGTTGAGGCAC 59 14182818 14182836 CTGTTTGGGTATTGCCCAG 58 NA InUTR Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086795 1 1 5 105 2R 13731906 13738566 CCAGCAGAAATACAGACGT 57 13738635 13738653 CTTTGTTGGCGTCTCTAGG 58 NA InUTR Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 3 3 3 136 2R 13593966 13593984 CTCAAGACTGATCCCATCG 57 13592685 13593866 TCGTTCAAATTCTGCTCGA 57 NA Drosophila melanogaster 61 CG11423 FBgn0034251 FBtr0086834 2 1 1 60 2R 13483602 13483620 CACGATTGGCGATTGAAGG 59 13483642 13483662 TGATCTCCTTCGTCTTGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42239 FBgn0250868 FBtr0290307 2 1 1 90 2R 13460457 13460476 CACATTCGAGCTGTTTGTCC 59 13460526 13460616 CTTGAAGTTCTTCATATCGCCA 58 NA Drosophila melanogaster 61 CG14480 FBgn0034242 FBtr0086827 1 1 1 130 2R 13452708 13452726 TTCTGGAATTGGTCGATGC 58 13452817 13452901 TTGCAGTTTCTTGTCTACACTC 59 NA Drosophila melanogaster 61 CG14479 FBgn0034228 FBtr0086952 1 1 1 60 2R 13390240 13390258 GAGTTCAGCACTTCACGTC 58 13390198 13390216 CAGTTGAGCGATCAGTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923,FBtr0086924 1 3 3 174 2R 13358561 13358686 AACATCCCAAGTTCAACTTCG 59 13358822 13358840 TTGAGGTGAGCGTACTTGG 59 NA Drosophila melanogaster 61 Sod2 FBgn0010213 FBtr0087078 3 1 1 90 2R 12661143 12661277 AATTTCGCAAACTGCAAGC 58 12661071 12661089 GCAGATGATAGGCTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CheB53a FBgn0261292 FBtr0091520 3 1 1 81 2R 12354636 12354654 TACACAGATTGGTCCTCCC 58 12354698 12354773 TAAGGAATAGTGTACCGGGC 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087154,FBtr0100615,FBtr0087152 1 3 5 80 2R 12247594 12247615 TTCGATATGTTCACCAATTGCC 59 12247654 12247762 ATCATTGAAGTGCTTCTCGAC 58 NA Drosophila melanogaster 61 CG8435 FBgn0034084 FBtr0087249 2 1 1 115 2R 12057693 12057711 AGTACAACACGGTGGAGAC 59 12057536 12057554 GACAACACGAGAGCTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Jhe FBgn0010052 FBtr0087223,FBtr0301751 1 2 2 80 2R 12008553 12008574 GACCCGAATACTTTATGGACTC 58 12008613 12008699 TCGATAGGAATCCAAAGGGTC 59 NA Drosophila melanogaster 61 CG15699 FBgn0034056 FBtr0087269 1 1 1 115 2R 11875327 11875345 TTATTTGTTTGGCGGACGG 59 11875170 11875188 CAGGGAACTGGAGTTCTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG8299 FBgn0034052 FBtr0087291 1 1 1 60 2R 11828932 11828952 CTTGGTGTGGTAATTCTCACG 59 11828892 11828910 GATCGCCACCAACAATGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30090 FBgn0050090 FBtr0087279 1 1 1 88 2R 11577496 11577515 AAACTCAAATCCGTGGATGG 58 11577566 11577640 CTGTTAGGACAAACCGCTG 58 NA Drosophila melanogaster 61 CG34188 FBgn0085217 FBtr0112381 2 1 1 133 2R 11315209 11315227 GACGGAGATATGCTGGGAC 59 11315041 11315115 GATATGTGACTCCATTCTGCAC 59 NA Drosophila melanogaster 61 CG33506 FBgn0053506 FBtr0091446 2 1 1 82 2R 10745451 10745471 TTTACACCATGGGTCACTACC 59 10745327 10745346 AATGCTGTAGAGCACAAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10205 FBgn0033970 FBtr0087447,FBtr0087446 2 2 2 122 2R 10720449 10720684 CATCGGCTAATGCTCTTCTG 58 10720769 10720787 GATCACCTTCTGCGTTTGG 59 NA Drosophila melanogaster 61 CG6543 FBgn0033879 FBtr0087643,FBtr0087644 3 2 2 116 2R 9741671 9741689 TAAGATCTTCGCTAGCCGC 59 9741377 9741395 TCGGTCTTGATGTACTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 arr FBgn0000119 FBtr0087702 2 1 1 85 2R 9342730 9342809 ATTAACAAGCTCTGCATCTCG 58 9342665 9342686 CAGATATCCGAGGATTCATCAG 58 NA Drosophila melanogaster 61 CG4646 FBgn0033810 FBtr0087764 3 1 1 188 2R 9107380 9107458 AAGTCGAATGCTCCCTACAC 59 9107211 9107229 CTTCTGGTCGTACTCCACC 59 NA Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 1 2 2 80 2R 8320535 8320555 AAGCAGTTCAAGTACGATCAG 58 8320418 8320493 TACTGTGACGCTCTCATCG 59 NA Drosophila melanogaster 61 Sr-CII FBgn0020377 FBtr0088004 1 1 1 80 2R 8097649 8097779 CAGCTTTAGGTCGAATTCCA 58 8097588 8097607 TCGATGGTGATTGTGTTCTC 58 NA Drosophila melanogaster 61 DebB FBgn0000426 FBtr0088010 2 1 1 78 2R 8071535 8071553 AACACGGAGGAAGTGATCG 59 8071475 8071494 TATACAGCACGTTGTTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pimet FBgn0033686 FBtr0087984 3 1 1 100 2R 8039028 8039138 CAATTGAACTAATCGAGCACGT 59 8039199 8039217 TGGTGTGCTGAAGACTACC 59 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 2 4 4 272 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394164 TTGAACTCGTGCTTCAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088151 1 1 2 140 2R 7265747 7266483 ATGTGCTGTTTGCGATCTC 58 7265625 7265643 ATATGATCAGGCCCGTGAC 59 NA Drosophila melanogaster 61 CG7745 FBgn0033616 FBtr0088119 2 1 1 94 2R 7195547 7195565 GTACGAGACGAAGGACGAG 59 7195681 7195699 GTTCGCGTAGGTACTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 JhI-1 FBgn0028426 FBtr0088360 2 1 1 87 2R 6195875 6195951 AAGGAAAGGTCTGGATCGC 59 6195806 6195825 TTCCAGAAATCCTGGTACGG 59 NA Drosophila melanogaster 61 Hdc FBgn0005619 FBtr0088333 1 1 1 85 2R 6131342 6131678 CTATCTCAAGGAAACCAAGGAG 58 6131724 6131742 TTACCACCTTAGGCGAGAG 58 NA Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088396 3 1 2 125 2R 5938139 5938157 GGCTTGGATAGTCCAATGC 58 5938245 5938320 CTCATCCTTGGGATCATTGG 58 NA InUTR Drosophila melanogaster 61 Adam FBgn0027619 FBtr0088387 3 1 1 163 2R 5857700 5857782 CTATGCGTGAATCTGAGCG 58 5857909 5857992 TAACCGTCAATGTCGTCGT 59 NA Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 3 2 2 80 2R 5289963 5289981 ACTACAAGCACCACTGGTC 59 5288641 5289919 AGACATAGTTGGCCACGAC 59 NA Drosophila melanogaster 61 CG30344 FBgn0050344 FBtr0088583 2 1 1 80 2R 5034541 5034627 AAGGCTCTGAGAATGGTCC 59 5034669 5034689 ATAGATATAACCGCTGGCCAC 59 NA Drosophila melanogaster 61 Hydr1 FBgn0033382 FBtr0302496,FBtr0300180,FBtr0088580 1 3 3 104 2R 5021182 5021200 GATGTACGCCTACCTGTCC 59 5021268 5021357 ATTATCGGTCGCTTGACCA 59 NA Drosophila melanogaster 61 Mys45A FBgn0033379 FBtr0088628 3 1 1 134 2R 5000834 5000914 ATGAAGCTCAATTCGAGCC 58 5000718 5000738 CACCGTCTTAGAATCATTCCA 57 NA Drosophila melanogaster 61 CG13742 FBgn0033372 FBtr0300369 2 1 1 92 2R 4974867 4974890 CCAAACTATTAGGAGCATACATCG 59 4974743 4974817 CAGTTTCTGCTTCGATCGTG 59 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385,FBtr0273384 1 2 2 92 2R 4858295 4858381 TTGTCAGCCTGGATTCCTG 59 4858221 4858239 TTCTTGGTCACTGAACGCT 59 NA Drosophila melanogaster 61 CG8642 FBgn0033312 FBtr0088729 3 1 1 81 2R 4500587 4500605 CCTTCACGCACATGAACTG 59 4499550 4500543 CGTCCATTTAAATTGCTGCG 58 NA Nonspecific Drosophila melanogaster 61 CG8642 FBgn0033312 FBtr0088729 2 1 1 68 2R 4499553 4500546 TCCCGCAGCAATTTAAATGG 59 4499504 4499522 CTCCCAGTAGATGCTCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Lcp3 FBgn0002534 FBtr0088743 1 1 1 108 2R 4322996 4323072 GTTCAAGATCCTGCTTGTCTG 59 4323142 4323160 CTTGCTGACAAAGCCATCG 59 NA Nonspecific Drosophila melanogaster 61 CG14760 FBgn0033277 FBtr0088794 3 1 1 127 2R 4143101 4143587 CTGCGATCATTCATCATCGT 58 4143677 4143695 GAACGTCTCAAAGGAGCTG 58 NA Nonspecific Drosophila melanogaster 61 CG14756 FBgn0033275 FBtr0088804 2 1 1 68 2R 4092793 4092811 TGAACTGCAGGACCTTGAG 59 4092743 4092761 GAGAGGTCGATTTCCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088835 3 1 4 153 2R 3700183 3700790 GAATTCACTCCCGTGATCC 58 3700907 3700925 CCGATATCCACGAAGAAGC 58 NA InUTR Drosophila melanogaster 61 CG12825 FBgn0033221 FBtr0088829 3 1 1 98 2R 3676780 3676799 AAGGAGGAATCATCTGCTCG 59 3676856 3676940 TCTCGTAGAGTCCATATTTCCAG 59 NA Drosophila melanogaster 61 CG12836 FBgn0033140 FBtr0089037 1 1 1 80 2R 2955807 2955827 GTGGATTTATGATAAGCGGCA 58 2955869 2956096 CTGCTATCTGCACAGATGC 58 NA Drosophila melanogaster 61 Tsp42Ee FBgn0029506 FBtr0086180 2 1 1 80 2R 2900609 2904524 CACCATTGTGTCGGTTATCG 59 2904564 2904585 TTAACTTCAACTACACCGATGC 59 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 2 2 3 80 2R 2880547 2880631 TAACGCTCCAAGTGTTATCC 57 2880671 2880692 CTCCAGGAAGTTACATAAGTCC 58 NA InUTR Drosophila melanogaster 61 CheB42b FBgn0066293 FBtr0086192 3 1 1 95 2R 2831321 2831341 ATTGTAATCGACCAGAAAGGG 58 2831180 2831264 AAGTCTCGCAGTAATCCGA 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 3 11 11 89 2R 2764982 2765001 AAAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG9445 FBgn0040674 FBtr0086210 1 1 1 95 2R 2726235 2726253 GAAGCCTTCTCCCACTACG 59 2726158 2726176 TTCTATGGCCATCTGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tdc2 FBgn0050446 FBtr0086142 3 1 1 89 2R 2573280 2574178 GTAACCAAGTCAAGCTGGG 58 2573209 2573228 CGGACTCGTTGATTATGCTC 58 NA Drosophila melanogaster 61 geminin FBgn0033081 FBtr0086147 1 1 1 60 2R 2543642 2543660 GAGACAGACCCTGAAACCC 59 2543600 2543618 TGAACCAGTGAGGTTCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ptr FBgn0033068 FBtr0086003 1 1 1 84 2R 2071965 2071983 AGACTCCTACTCGGTGGAG 59 2071839 2071918 GCCAGCAATAATTACCTGCA 59 NA Drosophila melanogaster 61 CG31600 FBgn0051600 FBtr0085949 1 1 1 90 2L 21914958 21915025 TGTTCTCGGGCTTATACCG 59 21914886 21914904 ATAGCTCCTGTTCATGGCT 58 NA Drosophila melanogaster 61 dtr FBgn0023090 FBtr0081516 3 1 1 88 2L 21363432 21363507 GCGAAAGCATTAACTGTACCA 59 21363557 21363575 TTCCGAATCGCTAGACCTC 59 NA Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290305 1 1 2 80 2L 20967738 21051786 TCTCAATTAAACGAGCATCGTC 59 20967679 20967699 GCATCAACATGTTCCATTGGT 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 1 9 9 88 2L 20877200 20877223 GATCAAGTTCTGCAAGAAGATACC 59 20877070 20877157 AAATATACTGGGTACTCAGTCCC 59 NA Drosophila melanogaster 61 CG9319 FBgn0032881 FBtr0081460 1 1 1 113 2L 20752113 20752133 AAGATTCTAACCGACTTTGGG 58 20751947 20751965 CGGGTTCTTCAGATCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2614 FBgn0032873 FBtr0081388 2 1 1 80 2L 20658587 20658674 GATGTCGCAATGAAGATATCC 57 20658715 20658734 GACAACTCATTCCCAAACTG 57 NA Drosophila melanogaster 61 CG18858 FBgn0042175 FBtr0081364 2 1 1 60 2L 20458427 20458513 TCGCCAGTGATATTCGTACC 59 20458386 20458405 GCTTATTTAGCCGAGCATCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10747 FBgn0032845 FBtr0081341 2 1 1 142 2L 20090934 20091010 CTGGCTATTCCAGGTTCCC 59 20090810 20090828 GAAGATTGCGTCTTGCTCC 59 NA Drosophila melanogaster 61 fok FBgn0020303 FBtr0081342 2 1 1 75 2L 20084611 20084629 GAGTCCACCACTTCCTCAC 59 20082992 20083010 CGGACTTTATCTGCTTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 2 3 3 106 2L 18963249 18963267 AATCCGTTCGAAGAGGAGC 59 18963106 18963179 GCTGTGATGCTTCCTTGAC 59 NA Drosophila melanogaster 61 CG10376 FBgn0032702 FBtr0081128 2 1 1 60 2L 18702758 18702780 CCAATGAGACATACAAAGTGTCC 59 18702720 18702741 CAAATAGCTGAGACCAATTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31751 FBgn0086909 FBtr0081092,FBtr0081093 2 2 2 83 2L 18679153 18682279 GGAGGATAGTAATGTTAAGAACCC 58 18682321 18682339 GAGTCCAGTGAGTTGAGGA 58 NA Drosophila melanogaster 61 CG5790 FBgn0032677 FBtr0081050 3 1 1 60 2L 18296109 18296128 GGTAGAAGTGTGACGTTGAC 58 18296150 18296169 CCATATAATCCTCAGCCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42659 FBgn0261531 FBtr0302514 3 1 1 80 2L 18007483 18007557 TTCCATTTCCGACTTCTTTCG 59 18007597 18007617 ATGTAGAAAGGGTTTATGGCC 58 NA Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0290267 2 1 3 134 2L 17963535 17963554 ATACGGAAGCTATGGAAACG 57 17972308 17972326 GTTTCCTTTCTCGATCCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 her FBgn0001185 FBtr0080883 2 1 1 150 2L 16678235 16678321 GATAAGCACGTCATCGCTG 59 16678433 16678453 ACTCATCGTCTAATTCGTCCA 59 NA Drosophila melanogaster 61 chif FBgn0000307 FBtr0080838,FBtr0080839 2 2 2 161 2L 16351950 16351971 GCTATAGGAACATATCAGCCGA 59 16349356 16349374 TTAGGAGGAGTTGCTGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 EndoGI FBgn0028515 FBtr0080824 3 1 1 89 2L 16258172 16258260 TAGCACAGAACGATTACACC 57 16258312 16258330 CGATTTCGTCTACCTGCAC 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502,FBtr0112943 1 3 3 80 2L 15650698 15650781 CATTCGCGTAACAATGTTACC 58 15650638 15650659 ATTGTACTCACAATACACCCAG 58 NA Drosophila melanogaster 61 TfIIS FBgn0010422 FBtr0080722 1 1 1 88 2L 15060443 15060461 AGATGAGCAAGATGGCCAG 59 15060307 15060327 GTCGAGATTGATGTTAAGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG4480 FBgn0032553 FBtr0080684 2 1 1 78 2L 14871764 14871835 CTTCCTACGTTCGCAATGG 59 14871704 14871722 GAAGAATCCGCCTAATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7968 FBgn0028532 FBtr0080551 3 1 1 148 2L 13849607 13849689 GAGAACTTTGGTTGCAATGG 58 13849800 13849818 TAGTTTGTGCTCTTCAGGG 57 NA Drosophila melanogaster 61 CG33649 FBgn0064115 FBtr0091626 1 1 1 60 2L 13831952 13831970 GGTCTGTGATAGAGCTGGA 58 13831856 13831874 CCATGATCACAGCCATCCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 tam FBgn0004406 FBtr0080571 2 1 1 129 2L 13825676 13825749 AAACCCAGTACCAAGGCTC 59 13825565 13825586 TTAAGGAAGTCCTTGGATAGGG 59 NA Drosophila melanogaster 61 CG31845 FBgn0051845 FBtr0080533 3 1 1 90 2L 13777754 13777772 GAGTTCAGTCCACTCACCT 58 13777825 13777906 ACAGCATTCCTTCTGTTTGC 59 NA InUTR Drosophila melanogaster 61 CG33641 FBgn0053641 FBtr0091618 1 1 1 117 2L 13529323 13529343 GGATGGATGTCTTATACTCCG 57 13529420 13529499 GGTAAAGTTCGCTTTAAAGGG 57 NA Drosophila melanogaster 61 CG31847 FBgn0051847 FBtr0301009 2 1 1 117 2L 13497429 13497512 CTCTCATAGGATTGGGCCTG 59 13497592 13497610 GCATCAATCTTGTTGCCGT 59 NA Drosophila melanogaster 61 CG16848 FBgn0032522 FBtr0080501 1 1 1 60 2L 13413144 13413164 CTCAAACAATCTGCCCTACTG 59 13413186 13413204 GCGATCTCCCAAAGATGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477 2 1 2 113 2L 13306159 13306178 ATTGGGAGAATTTACCGCCA 59 13305829 13306086 TATGGATTTCAACGTCATTGGC 59 NA Drosophila melanogaster 61 ref2 FBgn0032439 FBtr0080376 1 1 1 116 2L 12611377 12611445 GCACTATCTCGCAACATGTC 59 12611280 12611298 CGATCCTCCTTGAACACGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5435 FBgn0032431 FBtr0080387 2 1 1 89 2L 12430337 12430355 AATCATTTCGGGTGTTGCG 59 12430182 12430284 CTTTACAACCGCCTATGCG 59 NA Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343 3 1 2 181 2L 12173130 12173231 GGCGATCAAATGTTGGGAC 59 12173376 12173394 GAAAGTAGCGCCATTCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Patsas FBgn0029137 FBtr0080362 3 1 1 82 2L 12101435 12101508 TCACATGCACTTCGATCCT 59 12101371 12101389 CCGCAAGTAAGGATAACGC 59 NA Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 1 2 2 80 2L 12056423 12056508 TGTCAGACAAATATGCGGTG 58 12056551 12056569 GCAGAATTCTCCTCTTGCG 59 NA Nonspecific Drosophila melanogaster 61 Reps FBgn0032341 FBtr0080230 2 1 1 80 2L 11106007 11106081 GAGACCGTGATTGAGATCAC 58 11105946 11105965 GCATGAGTAGAACTGTGTCC 58 NA Drosophila melanogaster 61 CG6700 FBgn0032305 FBtr0080187,FBtr0301710 1 2 2 80 2L 10839573 10839593 ACATGATTGAATGGTTCCTGG 58 10839450 10839535 CGCTAATGTTAGGACGATAAGAC 59 NA Drosophila melanogaster 61 CG12299 FBgn0032295 FBtr0080113 2 1 1 178 2L 10737750 10737877 CATCTAATCTCACCCAAGCC 58 10738018 10738036 CAGTGGAAGGTGAGATCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 3 2 2 153 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328595 10328615 TTGACCAATAGCTGGAGAGTC 59 NA Drosophila melanogaster 61 CG5384 FBgn0032216 FBtr0080061 3 1 1 88 2L 10312898 10312971 CATTCGAACTTACTTGGTGAG 57 10312830 10312849 CATTTATGCCCTCCTTTCCT 57 NA Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 3 1 1 63 2L 9938492 9938569 GGTACGACGAGAAGGATCTG 59 9938448 9938467 TGCACCTGATAATTCAGGGT 59 NA DesignNoJunction Drosophila melanogaster 61 Srp54 FBgn0024285 FBtr0079875 1 1 1 60 2L 9913777 9913795 GCAAAGTCGAATGAGGCAG 59 9913817 9913837 CCTCTTTCACAATGGTCATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 2 3 3 80 2L 9911765 9912136 TTTGACACAATGGCCATCC 58 9911703 9911722 GTTCTCCCTTAGGTATCGCA 59 NA Drosophila melanogaster 61 CG13117 FBgn0032140 FBtr0079864 1 1 1 63 2L 9736871 9736889 GAAGTGCATTAGTGGGCAC 59 9736916 9736934 GGGCGTGTAGATATTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 3 2 2 80 2L 9654999 9655085 TAACGAACAATCGGTACGCT 59 9655125 9655146 TGTGTTCGTATATGACACTCCT 59 NA Drosophila melanogaster 61 CG9586 FBgn0032101 FBtr0079774 3 1 1 101 2L 9165838 9165956 CTCAATACTCCCAGACTGC 57 9165755 9165775 CCGATTTGTTGGTATTCTTGG 57 NA Drosophila melanogaster 61 Or30a FBgn0032096 FBtr0079770 1 1 1 80 2L 9112308 9112379 GTTCGGAAAGAGTTCTGCC 59 9112420 9112441 AAATCTCGTAGTAAGGTGATGC 58 NA Drosophila melanogaster 61 CG9525 FBgn0032080 FBtr0079786 1 1 1 60 2L 8961802 8961821 GGCAGAGGATCTACAATCAG 57 8961761 8961781 TGGTGCATATGTCTTAGGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rcd4 FBgn0032034 FBtr0079652 2 1 1 66 2L 8383244 8383265 AAGGATTCTAACTTTATCGCCC 58 8383356 8383374 ATACAACACGATTCGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17294 FBgn0032032 FBtr0079651 3 1 1 86 2L 8377778 8377852 CGTTATGATTGGAGATGATGCC 59 8377899 8377917 TATTTGCCGGTCTTGACCA 59 NA Drosophila melanogaster 61 CG7830 FBgn0032015 FBtr0079613 1 1 1 80 2L 8307065 8307162 ATCGTCATGTTCCTGAATGC 58 8307004 8307022 CTTGTTGTGAGCCTTTGGT 58 NA Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 3 2 2 109 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026630 8026649 TTCCTTGGACGTGAATTTGG 58 NA Drosophila melanogaster 61 CG7164 FBgn0031946 FBtr0079487 1 1 1 82 2L 7781844 7781922 CATGAAGTCGGTACGAGCA 59 7781966 7781986 CTACTGGTACTGGATTCGGAG 59 NA Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 1 2 2 89 2L 7196230 7196325 GACAAGATCACAAGGTGGC 58 7196159 7196177 ATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 CG31630 FBgn0051630 FBtr0079400 1 1 1 200 2L 7042482 7046262 GTAAACTGAATTGCACTGCTG 58 7046424 7046442 TTTACTACGCGTTGCACTG 58 NA InUTR Drosophila melanogaster 61 CG3430 FBgn0031875 FBtr0079350 2 1 1 97 2L 6958206 6958225 AAATTCTGGAGCTGCTACTG 58 6958282 6958361 TGTCTCATAATCCTTCTTTGGG 58 NA Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079379 2 1 2 112 2L 6800099 6800170 ACACATTTGTGGCTTCTAAGC 59 6800007 6800025 CCGATCGAGTTGCTAACCA 59 NA InUTR Drosophila melanogaster 61 Muc26B FBgn0040950 FBtr0079203 2 1 1 109 2L 6152054 6152138 TACGCCATAGTAATTGCATGTG 59 6152208 6152226 CGGTAGAGTTGGTTGTCGA 59 NA Drosophila melanogaster 61 CG9162 FBgn0031778 FBtr0089943 3 1 1 95 2L 6078629 6078698 CCGTATACATTACTAAACTACAGGC 59 6078748 6078769 GACGAATAAGAGTTCAGAGGAC 58 NA InUTR Drosophila melanogaster 61 slmo FBgn0029161 FBtr0112945 1 1 4 115 2L 6047770 6048142 GAGAAATACGCTCAGCTCAG 58 6047674 6047692 TATGTGCTCCGATGTCCAG 59 NA InUTR Drosophila melanogaster 61 CG11034 FBgn0031741 FBtr0079140 2 1 1 80 2L 5808613 5808632 AATGTCCACTACCAGCACTC 59 5808675 5808753 GGTGTAGGTCTGTTCCTCG 59 NA Drosophila melanogaster 61 CG7251 FBgn0031723 FBtr0079117 3 1 1 81 2L 5587906 5587982 AAGGGAATTAAGGTGGACCG 59 5587844 5587865 GCTTCTCTAGTAATTGCTGCTG 59 NA Drosophila melanogaster 61 morgue FBgn0027609 FBtr0077457 2 1 1 116 2L 4444545 4444563 GTTGCTAAAGGAACTGGCC 59 4444385 4444466 CAGCAGGTGTTACTATTCGA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31698 FBgn0051698 FBtr0077612 3 1 1 81 2L 3173531 3173551 TCTACTTCGTATGCAAGTCAG 57 3173403 3173489 GAAAGAAGACGGGCATATCC 58 NA Drosophila melanogaster 61 Hydr2 FBgn0014906 FBtr0077576 2 1 1 81 2L 3167126 3167208 CAACGAACAGGAGGATGAC 58 3167253 3167271 GAAGGTGCGAATGTACACC 58 NA Drosophila melanogaster 61 CG17258 FBgn0031496 FBtr0300814 2 1 1 81 2L 3032940 3032958 CTTCAAACGACTGCTGGAG 58 3032817 3032897 GGAGTTCTTTGTGATCAACCG 59 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 3 2 2 133 2L 2975263 2975281 TAGAGGTCACTCCTGAAGC 58 2975077 2975166 TTCCATGAATCCCGTTACC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3123 FBgn0031465 FBtr0077723 2 1 1 60 2L 2824977 2824996 TTATGTACTTCCTGCCACCA 58 2824936 2824959 CTCTTCTGATGTTCTGTTGATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 3 2 2 99 2L 2753623 2753642 CAAAGGAATCCGTGAAAGGC 59 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 2 2 2 80 2L 2579791 2579874 CCTGAAGCTCTATAGGAACGA 58 2579731 2579750 TTCTCGAAGTACTTGTTGCC 58 NA Drosophila melanogaster 61 CG3528 FBgn0031430 FBtr0077781 3 1 1 126 2L 2517592 2517663 AAAGCAAATTTCGACCGTC 57 2517484 2517502 GTCTACGCAGCTTGTAGAG 57 NA Drosophila melanogaster 61 CG33673 FBgn0053673 FBtr0091652 2 1 1 92 2L 1946491 1947304 GAGTCGACATCAACTTACTCG 58 1946419 1946438 TGTACCAGTGCTTCAGTAGG 59 NA Drosophila melanogaster 61 Gr22a FBgn0045501 FBtr0077897 1 1 1 80 2L 1793820 1793905 GCAGAGTAACAGAATTCACCC 59 1793760 1793784 CATAGTTTATATCGAGCAATCCCAG 59 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 2 6 6 127 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499926 1499944 CTGATTCGCATCCACTTGG 59 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926,FBtr0077927 1 2 2 84 2L 1368303 1368373 CATACGATCTGCATGGCAC 59 1368421 1368439 CTGTAAATCGTGCCATGCC 59 NA Drosophila melanogaster 61 CG42329 FBgn0259229 FBtr0299796 3 1 1 83 2L 1229175 1229260 ACTACGACGCTATTCTCCG 59 1229307 1229325 GCACCTCAACACAAAGGTG 59 NA Drosophila melanogaster 61 NetA FBgn0015773 FBtr0073942 2 1 1 80 X 14498821 14498839 TGACCTGGATCATACCGAC 58 14498641 14498781 GACCCAAGATCAAATAGGATCTG 58 NA Drosophila melanogaster 61 Rbp1-like FBgn0030479 FBtr0073790 1 1 1 164 X 13278470 13278488 TGTCGAAATGTCATCAGGC 58 13275068 13278342 GAGCGTGATCTATAGCGTC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 3 7 15 109 X 11275916 11275936 TATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 cm FBgn0000330 FBtr0071033 2 1 1 87 X 6904469 6904563 GGGCAAGAGCAATGTAAGC 59 6904400 6904418 GTTGTTGGTGTACCTCACG 58 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 PH4alphaNE2 FBgn0039783 FBtr0085685 3 1 1 80 3R 26336163 26336182 AGGGTAACGATCATATGGGT 58 26336043 26336122 TTATCCACTTGCTCATAACCC 57 NA Drosophila melanogaster 61 CG7943 FBgn0039741 FBtr0085560,FBtr0085559 1 2 2 95 3R 25873358 25873441 GCATTCAGGTATGTGGTTTCC 59 25873498 25873516 AAATAACGCGTTGGACAGG 58 NA Drosophila melanogaster 61 CG15506 FBgn0039686 FBtr0085456,FBtr0085457 2 2 2 188 3R 25547145 25547374 AAATGAGAGGCTCCCTTACC 59 25547525 25547543 AATCCCTGCTGATTCAACG 58 NA Drosophila melanogaster 61 CG14521 FBgn0039617 FBtr0085347 1 1 1 81 3R 24752552 24752627 CATGAAAGTGGAGTCCTATAATGG 59 24752494 24752512 TATACACAAGTAGGCGCCC 59 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 2 2 2 80 3R 16737741 16737762 GCTAATAAACGACTTGTATCGC 58 16737624 16737701 CCGTACTCTTCCTTCAACAC 58 NA Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083186 3 1 2 127 3R 11686213 11686231 CCAAATGGCTGATCTCCTG 58 11686322 11686508 TCTCCTTCTTGACCACCTC 58 NA DesignRelaxed Drosophila melanogaster 61 l(3)neo43 FBgn0011476 FBtr0301089 3 1 1 107 3R 11104152 11104232 AACCTCAGGTATCAGTACGC 59 11104064 11104082 GTACTCCGACTCCAACGTC 59 NA Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 1 2 2 87 3R 7650661 7663895 CATTTGAGGCTTCAACAACCA 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 CG4858 FBgn0037011 FBtr0078210 2 1 1 81 3L 20519857 20519950 GATTTAAGGTTGGTCTGCTCG 59 20519992 20520011 AAGATATCCCGTCCTTCCAG 58 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075044 3 1 4 220 3L 18985820 18986838 GATTCGCTCAAAGTGTGCC 59 18985618 18985636 CTAGAGCCACACTTCTGGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG6052 FBgn0036747 FBtr0075195 2 1 1 214 3L 17717448 17717472 GAGCTCAAAGAGGAATATAATGGAC 59 17716835 17717276 CACGAGCAGGAGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6053 FBgn0036195 FBtr0301326 2 1 1 80 3L 11690658 11690736 CTACTAACAGCCATGTTCGA 57 11690597 11690615 GACTTTCAGCTTGCTTTCC 57 NA Drosophila melanogaster 61 CG17181 FBgn0035144 FBtr0072563 2 1 1 60 3L 585046 585066 AAGAAATACTCCACATCCTCC 57 584946 585024 CCATGATTGATCTGTGCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165,FBtr0072179 1 2 2 80 2R 19956799 19956819 TAAACAAATCAATCGGCGTCC 59 19956855 19957283 TCTCTATACTAACTCGACCATACTC 58 NA Drosophila melanogaster 61 CG10904 FBgn0034945 FBtr0072205 3 1 1 104 2R 19857044 19857126 CGGGCAAGAAATTGGTATCG 59 19856959 19856982 TCTCTATGATCATGGATTCCAGAC 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087006 3 1 3 135 2R 12984413 12984431 CCGATCAACTAGAAGCCCT 58 12982553 12984314 TCAATGCAATTCCCTCACG 58 NA InUTR Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 2 3 3 80 2R 12509259 12509278 ACAATCAATATGCTGGGCAC 59 12509319 12509407 GGATACATGGATTAGTGCGTC 58 NA Drosophila melanogaster 61 CG33460 FBgn0053460 FBtr0100642 3 1 1 142 2R 11582008 11582028 GATATCCCAATGAATTGCCAG 57 11582131 11582222 AACCGGCATAATGTAGTCTG 57 NA Drosophila melanogaster 61 CG18369 FBgn0033860 FBtr0087624 2 1 1 60 2R 9485638 9485657 TCCAATTTCATAGCCAAGCA 57 9485677 9485698 TCCATAAACGATCTCCAGTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fmrf FBgn0000715 FBtr0088383 3 1 1 81 2R 5793899 5796654 TTTCAGAGATGGGCATTGC 58 5796698 5796717 GTATCGATGATCTCGCTGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 tomboy40 FBgn0033074 FBtr0085994 3 1 1 60 2R 2113466 2113486 TATGGTGAACAAGGGTCTGAG 59 2113505 2113526 CGAATTCATGTTAATGGTGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 2 1 1 67 2R 2090869 2091538 TTTGAAAGCCTGGACTTCC 58 2091569 2091587 GACGATTCCCAGTACGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CR15280 FBgn0028867 FBtr0100604 2 1 1 80 2L 14782727 14782798 CCGAACCAGACATTATTTGCT 59 14782667 14782686 ATGGCAGTAACTTCCAAAGC 58 NA Drosophila melanogaster 61 CG31663 FBgn0051663 FBtr0077893 1 1 1 95 2L 1867355 1869084 GGGATTGAATTTGACAAACAGC 59 1867281 1867301 ATTTGCAGCATGAAGTAGGTG 59 NA Drosophila melanogaster 61 CG31922 FBgn0051922 FBtr0077965 1 1 1 80 2L 1170349 1170422 TGAAGCGTTACGAGGATCC 60 1170464 1170484 AGTAACTGCCAAAGTATCGCT 60 NA Drosophila melanogaster 61 ninaA FBgn0002936 FBtr0078023 3 1 1 128 2L 877851 877869 ACCATCTATGCCATTGAGG 57 878059 878077 GAGGATGTTGAAGTCGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 lwr FBgn0010602 FBtr0078081,FBtr0078082 2 2 2 259 2L 542544 542565 AACTTATACCTTTAGCGAGCAC 58 542227 542245 TGTAATAGCAATGCCGGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 kraken FBgn0020545 FBtr0078016 3 1 1 80 2L 852990 853195 CTTTCGCCAGAGACAAATGG 59 853238 853256 CGCGATAGAGAACTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG31974 FBgn0051974 FBtr0300987 1 1 1 80 2L 141441 141462 ATTACAACGCCTTCATTCAGAC 59 141327 141402 CCTCTTCGAGAAACAATTCGT 58 NA Drosophila melanogaster 61 CG31976 FBgn0051976 FBtr0302194 3 1 1 80 2L 139299 139317 CGATTCTCAGCATCTCGAC 58 139180 139258 AGGTCACATAATAACAGCTCTC 57 NA Nonspecific Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416,FBtr0113415,FBtr0078163,FBtr0078164 2 4 4 81 2L 34720 34744 CTACGATGAGGATATTAATAGCCAG 58 34279 34566 ATGTTCTGCCCTTTGAGGA 59 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299617,FBtr0299616 3 2 2 106 3L 5798501 5798579 CTGAGATCCTATGGTCGGTC 59 5798648 5798666 AAATTCAAACCGATCCGCC 59 NA Drosophila melanogaster 61 CG3982 FBgn0035988 FBtr0076485 1 1 1 99 3L 9409433 9409451 ACCAGATGCACAAATGCAG 59 9409285 9409374 CTGAGAGGGATATCCATTCAGAG 59 NA Drosophila melanogaster 61 Rpb5 FBgn0033571 FBtr0088237 1 1 1 60 2R 6785949 6785970 AGAACATGTTGATGAGGATCCA 59 6785910 6785928 CGCTTGAGTCCAAAGTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42615 FBgn0261267 FBtr0302222 1 1 1 60 2R 4625024 4625042 CCTGTCCAATCTGTATCCC 57 4625066 4625084 CTGCCAGAGTAGGAATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CaBP1 FBgn0025678 FBtr0080837 2 1 1 93 2L 16356564 16356582 TAAGCGGTTTCGCAAACTC 59 16356420 16356439 AATAGAAGGCACTAACGCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18317 FBgn0031359 FBtr0077910 3 1 1 80 2L 1717808 1717888 AGTCCAAGTTGCTAGAGCA 58 1717746 1717764 CAGCCATCATGAACTCCAG 58 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083054,FBtr0083053,FBtr0301846,FBtr0113237 2 4 4 60 3R 11055624 11055644 GGAACCGGATAAACTCTACAG 58 11055666 11055684 AACTGCCGGATCAATACCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 2 4 4 107 3R 13533849 13533867 CTCAATATTCGCCGTACCC 58 13533696 13533778 GATTCGGTTCGGGATACTG 57 NA Drosophila melanogaster 61 CG13296 FBgn0035687 FBtr0076997 2 1 1 68 3L 6156736 6156754 GTTGGTTCTCCTTATGGGC 58 6156784 6156932 CACATGTAGCGACTATTTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG12004 FBgn0035236 FBtr0072746,FBtr0113122,FBtr0072745 2 3 3 81 3L 1572447 1572531 CTGCTACGAAGCCTTTGTC 58 1572574 1572594 CTCCGACATAATATTGCCCTC 58 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684,FBtr0113683,FBtr0113682 2 3 3 81 XHet 22990 23083 GCATATTTACTCAACCGACCA 58 23125 23144 AGCGACGCTATAGCTATGAG 59 NA Drosophila melanogaster 61 FucTC FBgn0044872 FBtr0299926 3 1 1 65 X 22411731 22411749 GAAACTGCGGAACACTCAG 59 22411147 22411166 AGTCAGTGTCCAACATCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32523 FBgn0052523 FBtr0077183 3 1 1 131 X 21089176 21089261 GAATGATGTAGTTCCGGCA 57 21089356 21089374 AAATCGTTGTGTCCACCAG 58 NA Drosophila melanogaster 61 CG6290 FBgn0030921 FBtr0074563 1 1 1 60 X 18332041 18332060 GTGACACAGAATATGGACGG 58 18332083 18332101 ACATGGCCTTGATTCTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33639 FBgn0053639 FBtr0091616 1 1 1 88 X 18108641 18112496 TTACATGCGGGCTTACTCC 59 18108571 18108589 CTCGATCCTTGTGGACCAG 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074233 1 1 3 100 X 16259518 16259536 TAGCAATTCGCCATTCGAG 58 16259673 16265362 CAAGGCGTTTGATCTCCTG 58 NA Drosophila melanogaster 61 CG9509 FBgn0030594 FBtr0073978 2 1 1 112 X 14802805 14802823 GTCATTGGAGCAGGATCTG 58 14802316 14802729 AACTCAGATTCGACGGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114451,FBtr0114452 3 2 2 84 X 11773136 11773155 GCATCCCTATAAACGTCCCA 59 11773010 11773094 GGTGATAATGTTCTGGTAGATGAC 59 NA Drosophila melanogaster 61 CG1837 FBgn0030329 FBtr0073551 1 1 1 81 X 11612792 11612871 AGTCATTGTCAGCGTTTGG 58 11612913 11612934 TCTTCGAGATAGTTACGGTAGG 58 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073617 1 1 5 100 X 11607830 11608515 GACAAGAGCAGTACGTTGAC 59 11607749 11607769 GGTGTAAGCTACTATACGCCA 59 NA InUTR Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524,FBtr0273235,FBtr0073522 3 4 4 82 X 11562932 11563025 AGTATCGCATTGTATACCACGA 59 11563068 11563086 CAGTGTGAATCGAGTCCGA 59 NA Drosophila melanogaster 61 CG1737 FBgn0030293 FBtr0073453 1 1 1 169 X 11245156 11245174 TAAGAGTGACCATCCGCAG 59 11245305 11245738 ATCTTTCATGGGTAGCTTCGA 59 NA InUTR Drosophila melanogaster 61 CG2889 FBgn0030206 FBtr0071450 1 1 1 80 X 10369104 10369122 CTTTGAGACGGACGATACG 58 10369166 10369245 TCTGGTAGGATCTCCAGCT 59 NA Drosophila melanogaster 61 su(r) FBgn0086450 FBtr0071338,FBtr0071337 3 2 2 97 X 9091372 9091390 TCAAGGATGTGATCGGAGC 59 9091235 9091313 GCACATGTCATCATCGATGAG 59 NA Drosophila melanogaster 61 Bx42 FBgn0004856 FBtr0071350 3 1 1 87 X 8999982 9000270 CAATATCCACTAGGTCTGGGAG 59 8999916 8999935 TAACCTTTCCCTTGTCGTCC 59 NA Drosophila melanogaster 61 Ppt1 FBgn0030057 FBtr0071225 1 1 1 80 X 8583045 8583066 TGGTTTCAATACTACACCACTG 58 8582927 8583006 CAGTCCCAGATCCTGATAGAC 59 NA Drosophila melanogaster 61 CG12659 FBgn0040929 FBtr0071229 3 1 1 107 X 8485666 8485687 CGTTTACCTTTCCAAAGAACTG 58 8485521 8485599 CATTGAGCGTGAAGTAGGTG 59 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071236,FBtr0071238,FBtr0071237 2 3 3 80 X 8382567 8382650 GCATCTTTGAGAAGGAAATTCC 58 8382508 8382528 TCATGGTTCCATATGTCTTGG 57 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 2 3 3 141 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766823 7766841 CAGAATCGAGTAGGCTGGG 59 NA Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 2 2 2 141 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0112956,FBtr0070964,FBtr0070966 1 6 6 80 X 6700769 6700788 GTTTGATGTACTCCACAGCC 59 6700827 6700925 GCTCATTGTTCGAGAATATCTCC 59 NA Drosophila melanogaster 61 Rbcn-3B FBgn0023510 FBtr0070316 2 1 1 194 X 1803426 1803444 TCCATAGCGGAGGAATCAC 59 1804792 1804810 CACCAGATTGGTACTCACC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13376 FBgn0029518 FBtr0100649 2 1 1 80 X 160685 160703 GAGAGTGGGTCATCTGGTG 59 160623 160641 AGAAGACCATCCACCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40573 FBgn0085748 FBtr0114198 1 1 1 60 U 9529456 9529477 CCCTCTCATATTGTTCACAACG 59 9529496 9529516 GTTGACTCATGATAAGTGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40668 FBgn0085764 FBtr0114214 3 1 1 101 U 9469954 9469973 ACGAGCACATATTGTTTCCC 58 9470037 9470055 GTAGGTAAGGGAAGTCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40648 FBgn0085762 FBtr0302229 1 1 1 60 U 9819842 9819861 AGGTGTCTTAAGCCCAAGAG 59 9819881 9819902 GAGATGAAACCTCCGATTACAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Or98P FBgn0067407 FBtr0085225 3 1 1 131 3R 23670872 23670890 GGCGCTACTTTGAGTATGG 58 23671098 23671119 GCTCAGAAATGTTCAGTTTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Hsromega FBgn0001234 FBtr0084057 1 1 3 135 3R 17122805 17123536 GAAATAGGAAGCCAGTTGGG 58 17123634 17123652 TCGAATAACGCTGCAATCG 59 NA Drosophila melanogaster 61 awd FBgn0000150 FBtr0085864 1 1 1 141 3R 27571579 27571597 TTTCATCATGGTCAAGCCC 58 27571277 27571295 ATCAGCGTAGTGCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 pygo FBgn0043900 FBtr0085806 2 1 1 103 3R 27402723 27403034 CTTTCACAGAACCTGTGTTGG 59 27402640 27402658 TATGCTTGGAAGACACGCA 59 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085582,FBtr0085584,FBtr0085583 3 3 3 154 3R 25959158 25959237 GATCAGGCTCAAGAGGTCC 59 25959022 25959040 AGGAAGCCATCTATGTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 2 1 1 153 3R 25631562 25631580 TTATCGAGACGGAGTCCTC 58 25631368 25631447 TTCTCATGTATTGCTTGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10000 FBgn0039596 FBtr0085315 1 1 1 80 3R 24576875 24576959 CAAGGCATCATAGTTGTACTACAC 59 24576818 24576839 GGAAACTAATCACCACACTCAC 59 NA Drosophila melanogaster 61 AR-2 FBgn0039595 FBtr0085316 3 1 1 104 3R 24563358 24566202 TTCTACAAGGCCGTTAACTG 58 24563273 24563291 TTAGAGTCCAGTGGTGGAG 58 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 2 2 2 80 3R 22769909 22769997 GAGATTGTCGAATACTATGGCG 59 22770035 22770056 GTCCTTGTTCATGTAGATGGTC 58 NA Drosophila melanogaster 61 Tb FBgn0243586 FBtr0085036 1 1 1 70 3R 22482241 22482259 GGCTATCAATATGCGTGGA 57 22482354 22482372 TATAGCCGCCTACATCAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lgr3 FBgn0039354 FBtr0084899 1 1 1 80 3R 21501215 21501235 TGTCGGTAATCCCATTAAGGA 58 21501277 21501414 ATTAGGGCCAACGAAAGTG 58 NA Drosophila melanogaster 61 CG13652 FBgn0039284 FBtr0084781 2 1 1 155 3R 20986965 20986983 CATCTCAATCTACGCGCTG 58 20987579 20987597 TGTCTGGAGGTTCTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF-3p66 FBgn0040227 FBtr0089622 3 1 1 80 3R 19507223 19507318 AGCGATATTGTCCTGGTAGC 59 19507361 19507379 GATAGTCATGAACTGCGGC 58 NA Drosophila melanogaster 61 CG5380 FBgn0038951 FBtr0084236 2 1 1 98 3R 18192500 18192518 CCAAGAAGCTCATCAAGGC 58 18192362 18192380 CTCCTCCCGTAATGGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31465 FBgn0051465 FBtr0084147 2 1 1 84 3R 17708592 17708668 CGCATACCATCAGCAAGTC 59 17708716 17708734 TCTGTGATGGTGGACTTGG 59 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0083984,FBtr0302412 3 2 2 80 3R 16737793 16737877 GGAGCGATTGGAACATATGAC 59 16737733 16737752 TTCAGCAAGCGATACAAGTC 58 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0083944 2 1 2 94 3R 16418212 16418297 AACGACTACACCAAGTTCG 57 16418136 16418157 CAGTTTATCTAGAGCCTCTGAC 57 NA InUTR Drosophila melanogaster 61 CG7655 FBgn0038536 FBtr0083479 3 1 1 62 3R 13508835 13508915 CATTATTTGATCGTCAACTGGC 58 13508938 13508956 CTCCACATCGATTTGCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Mat89Ba FBgn0261286 FBtr0083275 2 1 1 80 3R 12094710 12094730 TTTAGCCAGCCAAACTTTAGC 59 12094584 12094672 GTATGCAGATCTTAGTAGTCCCA 59 NA Drosophila melanogaster 61 CG14868 FBgn0038330 FBtr0083109 3 1 1 155 3R 11194556 11194635 AGTACAAGACAATGTTGGATGC 59 11194364 11194382 GATCGCTTAAGCTCTCGGT 59 NA Drosophila melanogaster 61 Neu3 FBgn0051314 FBtr0301498,FBtr0301499 2 2 2 80 3R 10496559 10497107 CACTATCTGCTTAAGCAGGC 58 10496498 10496516 GTGACTATGGTCGTCCCTG 59 NA Drosophila melanogaster 61 put FBgn0003169 FBtr0082977 2 1 1 81 3R 10447045 10447063 AAGTTCAGGAGAGTGTGGT 58 10446922 10447002 AATACATTAAGTCCCGGATGG 57 NA Drosophila melanogaster 61 CG9631 FBgn0027563 FBtr0082898 3 1 1 186 3R 10051835 10051997 AAATGAGGAGTATGATGCCC 57 10051668 10051688 AAAGTCCGAATCTATTCTGGG 57 NA Drosophila melanogaster 61 CG14357 FBgn0038204 FBtr0301280 3 1 1 88 3R 9937625 9937646 TTTGATCAATTACGGAACCCTG 59 9937502 9937577 CATTGGATTCCACGTGTTCC 59 NA Drosophila melanogaster 61 Hsc70-2 FBgn0001217 FBtr0082707 2 1 1 134 3R 8870798 8870816 ATGTGGCATTCAACGAGAC 58 8871368 8871388 CCTCCTGTATCTTCTTGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14609 FBgn0037483 FBtr0081573 1 1 1 80 3R 3028033 3028114 TATCCACGAATGAAGAGCCA 58 3028155 3028175 CATTTCATGAGCCAACATGTC 58 NA Drosophila melanogaster 61 Neurochondrin FBgn0037447 FBtr0081729 2 1 1 60 3R 2295375 2295396 TGAGTATATGGCTACGGATCAG 59 2295415 2295435 GGTGTAAGTGGTCTGTTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31538 FBgn0051538 FBtr0078819 3 1 1 60 3R 1102062 1102083 GAAGCAAATTGTAGAGTCAGTG 57 1102023 1102041 AAAGGTCCTTTGATGAGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 1 2 2 104 3R 359130 359148 TTGTTGTGCATCTAAGCCG 58 359277 359295 AAGGCTAAGGGAAGATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Qm FBgn0024733 FBtr0299869,FBtr0299870 2 2 2 80 3L 23087936 23088015 GAGCTGATAGGCTTCAAACTG 59 23087876 23087896 GTTGACCAATACGAACTCGAG 59 NA Drosophila melanogaster 61 Sfp79B FBgn0259973 FBtr0300318 2 1 1 90 3L 22073427 22073447 TTCTCGTTCAGAATGAAGCTC 58 22073496 22073517 CATTCGTGTTCGTATTCTTCTG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 3 4 4 197 3L 21199663 21199681 CTTTGCTCCCAACTTCGAG 58 21200651 21200669 TTCAGTATTTCCGCCAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG3618 FBgn0037028 FBtr0078271 2 1 1 60 3L 20809016 20809035 GATGTCAAAGCGTGTTTGAG 58 20808877 20808895 GGCAATAATTCGGAGTGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mtr3 FBgn0036916 FBtr0074918 1 1 1 80 3L 19906515 19906591 CCCAGAAACACCTTCATCC 58 19906453 19906473 AACCTTGGTGTTACCATACTC 57 NA Drosophila melanogaster 61 CSN1b FBgn0027057 FBtr0075074 2 1 1 276 3L 18897889 18897908 CAAATAGAAGCAGGATGCCC 59 18897560 18897578 TTGTAGGTGGTTTGAACGT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 U4-U6-60K FBgn0036733 FBtr0075209 1 1 1 60 3L 17506434 17506453 GCTAAACGAACCCATTTGCT 59 17506393 17506413 CTTAAGACGTCTTCTTCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4842 FBgn0036620 FBtr0075384 2 1 1 83 3L 16361575 16361593 AATGTCGTTTACCTTGGCG 58 16361639 16361716 GGCTAGAGCCTTTATTGGTC 58 NA Drosophila melanogaster 61 CG13067 FBgn0036589 FBtr0075465 1 1 1 237 3L 16264444 16264536 TCAAATACTTCGCTCTGTGC 58 16264736 16264754 TCTTAACGGTAGTAGGCGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG12272 FBgn0036571 FBtr0075452,FBtr0301912 3 2 2 82 3L 16118810 16118830 CACAAGAATGTCAAGATGCTG 57 16118872 16118954 TCTTTATCCAGTAACTGAGCC 57 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 3 2 2 80 3L 15060073 15060617 CAATTACTCAGCAGAGAAGTCC 58 15060014 15060032 GATTTGAGTTGGGTCCAGG 58 NA Drosophila melanogaster 61 CG34400 FBgn0085429 FBtr0290129,FBtr0290128,FBtr0290127,FBtr0290126 2 4 4 100 3L 13884420 13884439 TAGCTACCACTACAGCAACG 59 13884044 13884357 CCCGATAAATCTGGTGGGT 59 NA Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 3 2 2 60 3L 13000062 13000082 AAACATTCGTTACCCTTTCGG 59 13000103 13000122 TCGATCTAGTTGCTTCTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 1 3 3 80 3L 12736860 12736878 CTTTCACTGGTGCGAAAGG 59 12736922 12737001 GCCAGTGATGCCATATGAC 58 NA Drosophila melanogaster 61 CG5626 FBgn0036266 FBtr0076016 3 1 1 81 3L 12198562 12198644 TATGTTCCTACTAGAAGTTGGACG 59 12198504 12198522 GAGGAGCACATATGCTTGC 59 NA Drosophila melanogaster 61 Ir68b FBgn0036250 FBtr0076026 2 1 1 60 3L 12118845 12118863 CTGGCGTCAAATGGATCTG 59 12118803 12118821 GAGAAACTCCTCAGCATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yps FBgn0022959 FBtr0076027 3 1 1 219 3L 12116129 12116147 TATTATCTGCGTCAGCCGA 58 12115865 12115947 GGCCTTGAATGTATTCTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359 2 1 2 114 3L 11466396 11466414 GACGAGCAAACGAATTGCA 59 11466540 11466559 CAAAGAAGAACGAGTACGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14147 FBgn0036112 FBtr0076194 1 1 1 84 3L 10965836 10965924 GAATGAAGTTCTTCGTGTGCA 59 10965970 10965988 TGATGGCTATCCACATGGG 59 NA InUTR Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 2 2 3 143 3L 9360648 9360666 CTGCTCCAAGTGTTTCTCG 58 9361110 9361215 GCACTCTGTGATTTGGTGG 59 NA InUTR Drosophila melanogaster 61 CG42660 FBgn0261536 FBtr0302558 2 1 1 61 3L 7458923 7459004 TTGGCTTTAAACGTGACGC 59 7459026 7459047 ACGATAATACCCTTTGCTACAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Or65a FBgn0041625 FBtr0077004 1 1 1 137 3L 6313842 6313914 CCAGTTGAAAGCCCTAGGT 59 6314013 6314033 CCGATGGATTCACTGATACCA 59 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 3 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 1 2 2 91 3L 5758251 5758269 TAATTGGACTCTGCGTGGT 59 5757887 5758198 TTTGTATACTTTGCCGGTCTC 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0114646 2 3 8 82 3L 5661229 5661799 GCCATCTATTGAGTTCGTTCAG 59 5661842 5661860 TTGTTGCCATTTGACGGTG 59 NA Drosophila melanogaster 61 Syx17 FBgn0035540 FBtr0073293 1 1 1 87 3L 4404126 4404144 ATCTGGAACGTTTCGACGA 59 4404195 4404274 GATTTGAGTTGGAGCTCCG 58 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 2 3 3 92 3L 4247578 4247662 GCGGATTAGAGCAAACGAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072910,FBtr0072909 1 2 2 80 3L 2236098 2236119 GGAAATATCCGAGATTAGCTGC 59 2235962 2236057 GCTTCGTTCACCTGTATGG 58 NA Drosophila melanogaster 61 CG13907 FBgn0035173 FBtr0072593 1 1 1 60 3L 879207 879226 ACCATGTTGGATGTTAGCCT 59 879166 879186 TATTCGAGACTCCGATAAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413,FBtr0300956 3 2 6 82 2R 20817347 20817365 GTGATACCTGTGGACATCG 57 20817230 20817303 ATCTGAAGAGGTCTCTTCTCC 58 NA Drosophila melanogaster 61 Fcp1 FBgn0035026 FBtr0072342 3 1 1 82 2R 20457864 20457966 CAATTTAAAGGCTCTGTTTCCG 58 20457803 20457821 TTGAAGCCATGTTCCACAC 58 NA Drosophila melanogaster 61 CG13577 FBgn0034998 FBtr0300366 2 1 1 60 2R 20155940 20155959 GCAGAAGATCAAAGGTCAGG 58 20155899 20155921 GCTTAGTCTTGCTATTTAGACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 3 2 2 81 2R 19908217 19908295 GAAATATCTCTGCACAAGACGA 58 19908157 19908176 TACTTATTGTGGCCACATGG 58 NA Drosophila melanogaster 61 qkr58E-3 FBgn0022984 FBtr0290254 2 1 1 131 2R 18298123 18298199 GCCTACAGATCTGTCTTCG 57 18297868 18297886 ATACTCATAGGCCACCTCC 57 NA Drosophila melanogaster 61 hpo FBgn0261456 FBtr0086500 1 1 1 175 2R 15383114 15383132 CATGATAGCGCATGCAGAG 59 15382900 15382975 CCATAGTGCCCAAGTTCGA 59 NA Drosophila melanogaster 61 Eip55E FBgn0000566 FBtr0086710 3 1 1 60 2R 14516377 14516395 ACAAGATCGCTCTGAAGCA 59 14516415 14516437 CCCTTAATGTAGAAGGAGAACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 3 5 5 108 2R 14043478 14043496 GATGTCGTCGGATCAACAG 58 14042988 14043409 GAGTGTTACATCTGTGAAGCTC 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0087079,FBtr0113089 2 4 4 80 2R 12643608 12643626 CCAGAACGCGAATACAACC 59 12643487 12643566 GCTCTTAGTATAGCGTCCCTG 59 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087148 3 1 5 159 2R 12226630 12226649 CCAAAGTCACTGGCTTACAC 59 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11807 FBgn0033996 FBtr0087363 1 1 1 80 2R 11089567 11089585 CTGTTCAATGAAAGCGGTG 57 11089626 11090541 ACTAATAGCGTAGACCTCTAGG 58 NA Drosophila melanogaster 61 CG13344 FBgn0033884 FBtr0087586 1 1 1 94 2R 9749528 9749547 TTTCAGGTGTCTCAAATCGA 57 9749604 9749684 TTCGTCTTGTAAAGCGTCC 58 NA InUTR Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087648,FBtr0087647 2 2 2 120 2R 9708863 9708945 ACTATGTGAGCCAAATTGCC 59 9708762 9708781 TTAAGTTCCTTCTTGAGCCG 58 NA Drosophila melanogaster 61 CG30062 FBgn0050062 FBtr0087706 3 1 1 60 2R 9333539 9333558 CAAATCAGCGATCGCTACTG 59 9333498 9333519 CGTTGAATGCATAGTATTCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 2 1 1 70 2R 9280195 9280215 ACTATTTATCGGAGGTTCGGG 59 9280059 9280163 TTTCTTCCTCTCATGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33138 FBgn0053138 FBtr0087732 2 1 1 97 2R 9060138 9060156 TACGGACTTCACTTCCAGC 59 9060217 9060296 TGCCAGTTGTTGAAGTCAC 58 NA Drosophila melanogaster 61 alphaTry FBgn0003863 FBtr0088161 3 1 1 71 2R 7232218 7232236 GTCTGAGCTCTTCCCTGAG 59 7232165 7232184 CGTTAGCTGGGTTGTAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11191 FBgn0033249 FBtr0088868 3 1 1 129 2R 3889249 3889439 TCCTGTCTGAAGTTCCTGC 59 3889138 3889156 CATCCAGCTCCAGATCTCG 59 NA Nonspecific Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 2 1 1 91 2R 3812037 3812120 TTGCCAAGTAGTCACTGGG 59 3811964 3811982 CCTTCTCCATGAATTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1701 FBgn0033167 FBtr0113049 2 1 1 60 2R 3296499 3296517 GTGGAAGACGAGTTGTCCA 59 3296457 3296478 CCATTTCCCGTTCCTTATACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Opbp FBgn0050443 FBtr0086109 1 1 1 80 2R 2541943 2541964 ATATTCCCTGACCCTTCATCTG 59 2542003 2542077 GATTTAAAGCGCTTGTTGCAC 59 NA Drosophila melanogaster 61 CG8335 FBgn0033069 FBtr0085990 2 1 1 80 2R 2088455 2088475 GTGTATCTAAAGCCGTTGGTG 59 2088516 2088591 GCCCATAACCTGATTGTCAC 59 NA Drosophila melanogaster 61 gp210 FBgn0033039 FBtr0086044 1 1 1 80 2R 1648557 1648646 TGCTACAAATGGTCGTCCT 59 1648690 1648708 CTGGTATGCACATTCGCTG 59 NA Drosophila melanogaster 61 snRNA:U1:21D FBgn0003916 FBtr0078028 1 1 1 75 2L 901616 901634 TTAACCGTGATCACGAAGG 57 901559 901577 ATCGCAGAGGTCAACTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33813 FBgn0053813 FBtr0091817 1 1 1 60 2L 21451267 21451286 AGTTGAGAAGAAAGTGGTCC 57 21451309 21451327 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 2 2 2 89 2L 19418408 19418489 GGAAACCCGTACAACTTGAC 59 19418539 19418559 CCAATTGACCTTAGTCTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17928 FBgn0032603 FBtr0080908 3 1 1 90 2L 16791857 16791948 TTACCAGTGAAAGCTGGCT 59 16792002 16792020 TCGCTTAAGTCGTAGAGCG 59 NA Drosophila melanogaster 61 LSm7 FBgn0261068 FBtr0080934 3 1 1 60 2L 16742960 16742979 GCAACAATGACGGTAAGGAG 59 16742919 16742938 AAGTACTTGGAGAGGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823,FBtr0080822 1 2 2 81 2L 16238090 16238166 AAAGATGATCTGAACTGTGGTC 58 16238208 16238226 AGATGAGCAGGTTCACCAG 59 NA Drosophila melanogaster 61 esg FBgn0001981 FBtr0080734 3 1 1 60 2L 15334623 15334644 CACATCATTACCTTCATGGTCG 59 15334663 15334683 ATGATTTCAGATCTCATGGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42680 FBgn0261566 FBtr0302802 3 1 1 60 2L 14588048 14588066 CCAAGGAGGTAGCTATCCA 57 14588006 14588026 GTTGTAATGAACAGGTTTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 3 2 2 81 2L 13829396 13829414 CCGAGACATACACCTTTGG 58 13829264 13829352 GATAAGGCAATCTGGGTTCG 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139,FBtr0089910,FBtr0113040 2 5 9 113 2L 13275765 13275783 GAATAGTCCGACCATCGAG 57 13275860 13276259 GAGACTCCATTACCTTGCG 58 NA Drosophila melanogaster 61 CG5122 FBgn0032471 FBtr0080431 3 1 1 135 2L 13130640 13130660 TTTACCCTGAAATAAGCACCC 58 13130757 13130835 TATCCGGTGCTTACAGAGG 58 NA InUTR Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091683 3 1 5 210 2L 11278251 11278269 TTTGTCTCACTCCTGCGAG 59 11278603 11278621 GCATTATGGACGAGTGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cpr30F FBgn0051876 FBtr0079897 1 1 1 62 2L 9932926 9932944 CATTGTGAAGCCACTGCTG 59 9932882 9932900 TAGGCGAAATCGTAGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trs23 FBgn0260861 FBtr0079730 3 1 1 110 2L 8686483 8686560 GGAATAAATGTGGGCCATGTC 59 8686632 8686650 ATAGTTCTCCGGTGCATCC 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 1 2 4 80 2L 8428053 8430284 GGACAGCAAATTGAGGTGG 59 8430326 8430346 TTGTTCCTGTGTTGTAACGTC 59 NA Drosophila melanogaster 61 CG14537 FBgn0031954 FBtr0079526 1 1 1 60 2L 7840893 7840911 AAAGATCGGCGAGATTGTG 58 7840935 7840953 TATTGCCCAGAACCGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 2 1 1 60 2L 7783043 7783314 ATGAAGAATACAGTCAGCACCA 59 7783333 7783353 AGGATAAGCTTTAGACCTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG13779 FBgn0040954 FBtr0079403 2 1 1 97 2L 7064134 7064152 AACAAGAGCGAAGACTTGG 58 7064268 7064286 TTTAGCTCTTCCTCGTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 Sec61alpha FBgn0086357 FBtr0079266 1 1 1 103 2L 6479052 6480041 AGCGCAAGATCCAATTCAG 58 6478967 6478986 GTCTGAGCTCATGATACCGA 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 2 11 11 97 2L 4994704 4994794 CCCTTTAAGGATTACCTGGAG 57 4994627 4994648 GAGATGAAGCCATTGATATGTG 57 NA Drosophila melanogaster 61 dp FBgn0053196 FBtr0290006 1 1 1 80 2L 4563162 4563180 AACTTTCCCGGCTCATACC 59 4562473 4563118 CTCGTTGATGTTCTCGCAG 59 NA Drosophila melanogaster 61 CG33543 FBgn0053543 FBtr0091509 2 1 1 132 2L 2001074 2001387 TATAAACACCGTCAACTCGAC 58 2000962 2000980 ATCGGAGTCCGAGAAAGTC 58 NA Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 2 2 2 80 2L 1747845 1748777 GCTGTGGTCTTGACATTTCC 59 1748819 1748838 GTAGGGACCCAGTTTGTACC 59 NA Drosophila melanogaster 61 Or22b FBgn0026397 FBtr0077874 3 1 1 80 2L 1523520 1523680 TGATATTGGACTATGTCGACG 58 1523720 1523740 GTACAATACCGATCAAGAGGA 57 NA Drosophila melanogaster 61 Lsp1beta FBgn0002563 FBtr0078025 1 1 1 114 2L 898836 898854 GCAGAAGTTCCTCTTCGAG 58 898930 899018 GTCGTAGTGAGTGTAGTAGGA 58 NA Drosophila melanogaster 61 U2af38 FBgn0017457 FBtr0078133 1 1 1 80 2L 294490 294508 CAACACCACAGTAAAGCCG 59 294360 294446 CGAACAGTTCACCTTGTCC 58 NA InUTR Drosophila melanogaster 61 Nhe1 FBgn0026787 FBtr0301452 2 1 1 95 2L 105322 105399 CTATCCACTGTTACCCAAATTACC 59 105250 105271 GATTGCTAATCCCAGATAAGCA 58 NA Drosophila melanogaster 61 net FBgn0002931 FBtr0290323 1 1 1 231 2L 87033 87051 CGCATCGGAATTATCAGCA 58 84078 84096 ACCTACGACTTTGAAGGGT 58 NA DesignNoJunction Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 1 5 5 109 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 3 2 2 80 2L 1359510 1359530 CGACGGATTTCATAGAGAAGG 58 1359401 1359470 TCTTTACAGTACCAGTTTGGG 57 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077939,FBtr0077938,FBtr0077936,FBtr0077937,FBtr0077934 2 6 6 127 2L 1500031 1500121 CACTCAAGTCAACATATCCAGTC 59 1499926 1499944 CTGATTCGCATCCACTTGG 59 NA Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 2 1 1 105 2L 1501995 1502013 AACAATCGTGGTCAACTGG 58 1501848 1501866 AGCTAATGGTTTCCACAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 3 1 1 105 2L 1501996 1502014 GAACAATCGTGGTCAACTG 57 1501849 1501867 GCTAATGGTTTCCACAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 3 2 2 85 2L 2368138 2368156 ACTCTTTGCTAGTGGCTCC 59 2368204 2368325 AGGAAGTGATCTGAGTGCTG 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 3 4 4 81 2L 2495422 2495442 CTGATAACGCTGGAGTTTCAG 59 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 3 4 4 60 2L 2768914 2768934 AAATCAGTACTGCCTCAACGA 59 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 1 7 7 80 2L 2963125 2963239 CTGTTAAGGTGATTCGTGATCTG 59 2963278 2963297 CAGCCTCTTCGTAATTCGTC 58 NA Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 3 2 2 80 2L 3067257 3067275 AGACGAATGTGACCTTGGT 59 3067318 3067398 TTGTGCAGACCTCCTTAAGG 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089304,FBtr0089307,FBtr0089312,FBtr0089310,FBtr0089309,FBtr0089306,FBtr0301399,FBtr0100363,FBtr0089308,FBtr0089305 2 11 11 80 2L 3626041 3626060 TTCAGACCATCATGATGCGA 59 3624660 3625999 CTTTGAAGATGGGCACACTC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 1 8 9 83 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878994 3879012 CTGATTAGCATCACCGCTG 58 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 3 5 6 83 2L 4192685 4192706 GGAACCTTAAAGACAACAACCA 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 2 5 6 91 2L 4307446 4307566 TACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077399,FBtr0077400 1 4 6 80 2L 4912768 4925837 ACAGCCAAACGAAGTAACAG 58 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0079033 2 1 6 119 2L 5042882 5043811 CGACTAATGAAAGCAGGCG 59 5042781 5042799 GAGTTCTCGAGTGGATGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 2 6 6 60 2L 5047161 5047179 CAGACGTTAAGCGACATGG 59 5047198 5047287 CTTCGTTATAGATAGCTGCATTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 1 2 8 92 2L 5068387 5070108 ACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 2 5 8 93 2L 5069211 5070107 GCGCGTAAGACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 2 4 4 98 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 1 3 3 183 2L 6049172 6049190 AACTACTGCTTCGAGATCG 57 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079250 2 1 2 95 2L 6342342 6342737 TCCATACAACCCACCACAG 59 6342795 6342814 ATAGAAGACGACCAGACTGC 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335 2 1 2 69 2L 6535871 6535889 AATGCCATACAACTACGCT 57 6532944 6535838 ACGTTTAACCTTTGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296,FBtr0079295 3 2 2 80 2L 6652431 6652504 GCTCATTAGAAAGGGATCTGGA 59 6652545 6652563 GACCGTTAAGGACTTCGGA 59 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0114489,FBtr0114488,FBtr0079312 2 3 6 81 2L 6688727 6688805 CAACGAGATTGGTTCCTACAG 58 6688666 6688684 CGAGGATCTGTCTAGGCAG 59 NA Drosophila melanogaster 61 GRHR FBgn0025595 FBtr0079308,FBtr0079310,FBtr0079309 2 3 3 80 2L 6714608 6714626 CAATGGCACCATTCACCTG 59 6713839 6714565 AACAGTATGCTGTACACGGT 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079398 2 2 3 105 2L 7041151 7051377 ACTATTTCCTTCTATGCGGC 57 7051445 7051463 AGCTCTAGGTCCTTCTCCT 58 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079436 3 1 2 80 2L 7383685 7383705 AGCAAAGATCCTCGTATCCTC 59 7383746 7383816 CCTCAGAGTTATCACCCTCG 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 2 4 4 80 2L 7444381 7444468 TCATTATCGATATGGAAGGGCT 59 7444509 7444527 TGTAATCCAGCAACATGGC 58 NA Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 2 1 1 91 2L 7783877 7783895 TCCCTGGGTTTAATAGGCA 58 7784003 7784021 TTAAGGGAGTTGGCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 1 4 5 60 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079578,FBtr0079577 1 2 2 60 2L 8147836 8147857 AAGAGAATGTTGGAGGAAATGG 58 8147872 8147896 TGTACTCTGCATATTCGATATAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079625 3 1 9 84 2L 8228547 8228566 TACCGACGTAGTCATACCCT 59 8228246 8228500 TTTCCACGTGCTTTCTCCA 59 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 3 3 3 71 2L 8450795 8450813 CGAGACTATCGAAATGCGC 59 8450677 8450695 CATTGTTATGCCCACCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 2 3 3 81 2L 9957835 9957854 GAGATTCTCAGGGAGCAGAC 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 1 3 3 80 2L 10275742 10275762 TTTCCTAGCATATCGCAACTC 58 10275615 10275700 TGCTGATATAAGACGCCGA 58 NA Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 3 2 2 88 2L 10383538 10383625 TCGTTGAAGATCTTGGATGTC 58 10383672 10383693 ATAAAGATCTCAAGATCTCGGG 57 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100489,FBtr0100486 2 8 10 80 2L 10806032 10806052 AGCTACAGAAGGATCAAATCC 57 10805731 10805990 CCTGCACATATGTCTTCGG 58 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572 1 1 3 104 2L 11987772 11987790 CAAGAAGCACAAGGAGCAC 59 11987503 11987706 AAGGAGAAACTATCCGAGTCC 59 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572 2 1 3 105 2L 11987773 11987791 ACAAGAAGCACAAGGAGCA 59 11987503 11987706 AAGGAGAAACTATCCGAGTCC 59 NA Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080301 2 1 2 142 2L 12063015 12063088 CGGACATGATGACAACTGG 58 12062891 12062909 CAAGAACGTAGGTGTTGCC 59 NA Drosophila melanogaster 61 rho-6 FBgn0032415 FBtr0080359,FBtr0080360 2 2 2 82 2L 12131335 12131355 CCTACTGACCTATATGCTGCT 58 12131047 12131294 GGCAGATACCTATAAAGCACTG 58 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0110957 3 1 4 129 2L 12389663 12393403 TCTGCCAGGACTAAATTTCCA 59 12393494 12393512 AAGTGGGTTAGATGCTGCT 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 2 2 8 90 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458198 12458217 ATCATGAGATGCGACTTGAC 58 NA Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080441,FBtr0080439 1 3 4 80 2L 13204265 13208125 GATGGATGCTATGATATGGTACAC 59 13208160 13208182 CACAATTACCTTATCGCCAAGAG 59 NA Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 3 1 1 261 2L 13457651 13457669 CATCGGATGATGTTGCCTG 59 13459942 13459960 TTTGGTGGATCAGAGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 p38b FBgn0024846 FBtr0080534 2 1 1 229 2L 13780700 13780718 AGCGTTGTTGTCCAATCAG 58 13781013 13781031 AGCTTGTAGAATTTGGCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16890 FBgn0028932 FBtr0080575 2 1 2 93 2L 13783028 13783052 GGGAGGTAAACTTTAGGTATATCGA 59 13782908 13782927 TAGTTCAGCTGATCCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 2 2 2 81 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164180 14164201 TTCTCCAGTGTATCAGAATCCA 58 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 3 2 3 81 2L 14846481 14846797 TACTTTGTTAAGGAAGTGCTGC 59 14846421 14846439 GTCCAATGACCAACTCCCA 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 2 4 5 160 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737812 15737831 TCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 1 2 2 80 2L 16308316 16308402 GAAGCTCACAATGTTGGCC 59 16308442 16308464 TTGATGATATAGGTCAGCTCCTG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 2 7 7 111 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467651 16467669 CTTGTAGTATGCCGTCGGT 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 1 2 2 81 2L 18131635 18131653 AAGTCCAGTTTGCAATGGC 59 18131511 18131592 AGTCAATTACCTTGCAATCGG 59 NA Drosophila melanogaster 61 Lim3 FBgn0002023 FBtr0081170 3 1 2 146 2L 19081986 19082932 GAGTTCTTGCTATCCACAATCC 59 19081861 19081879 GAAGCACTTGTCGTTCAGC 59 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 2 4 4 80 2L 19391955 19392075 TCAACTGCATCAATATCGCA 58 19391894 19391912 GTGCTTGTCAGCTCTTCAG 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301719 3 1 4 127 2L 19856249 19857679 CTATGCCGAGATCTACACCG 59 19857769 19857787 TAACCGCCTCGATAACCTC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299910 1 5 7 80 2L 21121224 21121590 AGAGATCTTAAGGGAGCTGAG 58 21121629 21121650 CCTCATAACTTCCATAGCATCG 58 NA Drosophila melanogaster 61 crc FBgn0000370 FBtr0081512,FBtr0081513 3 2 3 83 2L 21318352 21318370 TCGATGCTTACAAACAGGC 58 21318416 21318500 CAGGAGTATAGCATTGCACC 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063 1 3 4 98 2R 1327170 1327188 CAACAACTGGCTATCCTGC 58 1327249 1328123 ATTCATAACGACTCCTTGCG 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301421 3 1 7 132 2R 2625570 2625588 AAGGAGTGCTCGATTTCCT 58 2613523 2625477 TCTTCTTTGTAGAACAGAACGG 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 1 5 11 135 2R 2764827 2764845 CCGATCAGGCTGAATTTGG 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111080 2 1 59 80 2R 3243726 3249232 GTCATCACAGAACCCATTGG 59 3243665 3243684 CGAGCTCTTTATACGGTCGT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050 2 1 59 109 2R 3236477 3242607 CGGTACCATCGTTTAGATGG 58 3236387 3236411 GTCCTTAATAATGAGAGTACCAGAG 58 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 2 5 5 80 2R 3371066 3371168 TGGACTTTATGTGGGATATCG 57 3371006 3371024 AAGTGCGATCTTTCTCGTC 58 NA Drosophila melanogaster 61 CG1620 FBgn0033183 FBtr0088983,FBtr0300830 2 2 2 80 2R 3382961 3383045 AGGAGACGGAAAGATTCACTC 59 3382901 3382919 ACTCGGATTCGCTTTCCTC 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917 2 1 6 91 2R 3525795 3525814 TACTTTGGGCCTAGTCACTG 59 3525867 3526111 CCGGCAGATCTAATTTCACC 58 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088888,FBtr0088889 2 2 2 119 2R 3803014 3803413 GTTTATAGGCTCCGACTTTCC 58 3802915 3802935 GTCCTCTTCGTCACTATTCAC 58 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 2 3 3 80 2R 3858083 3858102 TGGCTACATATGGGAAGCAG 59 3857965 3858043 CGGAATGTAGATGACCATATGC 59 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0088815 2 1 2 155 2R 4026650 4026668 GACAAGGAGCCCTTCTACG 59 4026088 4026451 GATGTAGCCAGAGGACTGG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 1 12 12 80 2R 5006266 5006286 GCCAGTAAAGAGGGATTTGTC 59 5006325 5006418 AACGTTAGGTCAACAGTTTCAC 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 2 2 4 89 2R 5013708 5014932 AAGGACAAGACTAATCCGGC 59 5013524 5013544 CTTGAATCCCTTATAGGCGGT 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302497 2 1 4 129 2R 5015026 5015044 CCTAACGATGCTCAACAGC 59 5013563 5014936 CTCCTTAACCTTGTCCTTAAGG 58 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089930,FBtr0089932,FBtr0089933,FBtr0089931,FBtr0089934 1 5 5 80 2R 5066161 5066179 GGTTGGTTTGAGACATCCG 58 5066038 5066123 GTTGATGAGTATCTTATTCACGAGG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 1 3 10 81 2R 5155477 5171347 GATTCGTATTATCAGGGCGA 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 1 2 4 80 2R 5782125 5782146 CCTAAGCGATGAAAGTTGTCTG 59 5782185 5782263 GCTATTGGTTTCTCTTCGGTG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 3 10 17 83 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182825 6183262 TCGATTGTTCTAGATTCCCG 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088347 3 1 17 182 2R 6182006 6182118 TACACCACCAAGACGAACC 59 6182261 6182362 GTACCATACAACTTCTCGTCCT 59 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 3 2 2 80 2R 6226720 6226739 ATCTGGCAGCAGATACTCTC 59 6226603 6226678 GGGATGGACAATCGTAAGTG 58 NA Drosophila melanogaster 61 CG11825 FBgn0033519 FBtr0088316 3 1 1 213 2R 6308282 6308300 TCGTTGGATGTTTGACAGC 58 6308029 6308052 CTACCATTTCTGATTCGATGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 3 3 3 91 2R 6527407 6527426 CAATCATACAAGTTGTGCGT 57 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 3 2 2 81 2R 6706100 6706120 AAATGGTCACAATCAGAGCTC 58 6705984 6706062 CGGAGTATCTCCATAATTATTCCG 58 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301431 3 2 4 121 2R 7784025 7784108 CAATCGAGATTTGTCGTACAG 57 7783924 7783943 CATATTGTTGAACTGCACCG 57 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088006 2 1 2 150 2R 8088045 8088287 CTGATCAGCAAACCGAACG 59 8087525 8087544 ATGTAGGTACCATCGATGGC 59 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909 2 1 2 83 2R 8255912 8256260 TAATGAAGGCAAGTCTGGAC 57 8256305 8256324 GGGAAATAACCTTGTAGCGA 57 NA Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 1 1 1 63 2R 8264452 8264470 ACCTCAAGAATCCAGGCAC 59 8264604 8264622 GAGGTGTACGAGAAGGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr49Ac FBgn0033725 FBtr0301372,FBtr0087917 1 2 3 80 2R 8274922 8275426 GGATAATAATGGCCGGAGTG 58 8275829 8275847 TCGCTCACATGTCTGTAGG 59 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087943 1 1 2 83 2R 8400280 8400874 TCATCTACAGGTCCGAAGG 58 8400215 8400233 TCTCGAAGCGTACTTCCTC 58 NA Nonspecific Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087876,FBtr0300390,FBtr0087877,FBtr0301490 1 4 8 200 2R 8560839 8563642 ATAATGCCAAGCTCCATCG 58 8560657 8560678 CGTAGTTATTTAGCTTGTGCAC 58 NA Drosophila melanogaster 61 CG13331 FBgn0033850 FBtr0087672,FBtr0087673 2 2 2 71 2R 9409618 9409831 ACTGAGAGGCAACTACCAG 58 9409866 9409884 TACTCCACACTGTCCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 3 4 4 144 2R 9717363 9718066 CATACAAGTGACCACTGCC 58 9718171 9718192 CTTGTATTTGTCCTTCAGATGC 57 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 3 10 15 151 2R 9752989 9753574 ACCAATTAGGCGAAACATCAG 59 9752858 9752876 CCTATAGCCGGAATGGCTC 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 3 3 3 81 2R 10251411 10251487 AGGAGATCGGTGTTTCTGG 59 10251532 10251550 GTGAGGTTGTACTTGAGGC 58 NA Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 1 1 1 60 2R 10319430 10319450 ATATCGTTCAGCTAATCCAGG 57 10316227 10316246 AGGAATTTGTCCTCGTTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 kn FBgn0001319 FBtr0112809,FBtr0087465,FBtr0112810 1 3 4 80 2R 10663088 10663109 AGGTGACGCTATCCTATAAGAG 58 10662961 10663047 GTTCGTTGAGAGCTGAGAC 58 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087369 3 1 2 104 2R 11136894 11136912 AGTCGGGTGATAAACTCCC 58 11136980 11141560 CACAATGATGCTGGTCTGG 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 1 4 4 80 2R 11344303 11350806 TTGATATCGAGGAAGAAACGTC 58 11350847 11350865 TCTTGAGGAGCATCAGTGG 59 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112590,FBtr0112587 3 2 4 80 2R 11311845 11311866 GATTTGTCCATGAAGAAGTTCG 58 11311905 11340376 CACGAATAGATCCTTCTGAGC 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 1 4 4 80 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747611 11747704 TGCTCTAGATCTAGGCCCA 59 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 1 3 3 80 2R 11882020 11882038 TATCCTCAATGTGGACGGT 58 11881893 11881978 GCTTCCTCACTGGTAAATGAG 58 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 1 3 4 80 2R 12415123 12415141 ATGTGATCAACTTGGAGCC 57 12415185 12416062 TCTTGCAGTCGAAGATCTG 57 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 2 3 5 150 2R 12562743 12565925 AGGAAATCAGTACTGGATGCT 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 1 2 6 99 2R 12896437 12897013 TCATTGTGAGACCGAGGAG 58 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 2 2 6 100 2R 12896438 12897014 ATCATTGTGAGACCGAGGA 58 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 2 2 9 80 2R 12957455 12957475 TGTATCGCTTGAGGATAACGA 59 12955712 12957417 GAATCAGACCTATTTGAACGACG 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 1 2 9 80 2R 12957456 12957475 TGTATCGCTTGAGGATAACG 57 12955712 12957416 GAATCAGACCTATTTGAACGAC 57 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0086949 2 1 8 88 2R 13409395 13411596 TCTAACCGATTCGGGACTG 58 13408422 13409344 AGAGTTTAGGACCTGAAGCG 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 1 1 2 247 2R 14419950 14419973 CGGTAGATGTAGGTAGAGTATCTG 59 14420377 14420395 AGAGGAATGATGGTTCCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gint3 FBgn0034372 FBtr0086656,FBtr0086654,FBtr0086655 3 3 3 80 2R 14546264 14546282 TTAGCTTGGTGTCCAACAG 57 14546143 14546220 TCGGAATGAGTTTGCAGTC 58 NA Nonspecific Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 1 2 2 80 2R 14616059 14616078 TTCTACGGTGTCTCCTTCAC 59 14615933 14616018 GCGATTAACTCCGTAAATCCA 58 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0100137 1 1 3 81 2R 14947146 14947247 GGTGTAAGTATACGTGTCCTC 57 14947290 14947308 CAGTATCGCCTTGAGAACG 58 NA InUTR Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 2 10 10 80 2R 15298012 15298105 CAACAAGAGTCACTTTGTCCT 58 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473 2 1 2 124 2R 15558647 15558876 GCTAATGCGAAATCAGCCC 59 15558964 15558982 ATAAGAACCCGAGAGCTGG 58 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086473 3 1 2 125 2R 15558646 15558875 GGCTAATGCGAAATCAGCC 59 15558964 15558982 ATAAGAACCCGAGAGCTGG 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 3 7 15 131 2R 16910969 16910987 CCACTAGACAAGCAGAACC 57 16911081 16911489 CAATTTGGACGTCAGTTCCT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 2 4 15 149 2R 16908813 16910578 AGCAAACTGGTTGTTACGG 58 16910959 16910977 GTCTAGTGGTTGCTCCCTC 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0301897,FBtr0301900,FBtr0301899 3 4 15 149 2R 16908815 16910580 CAAACTGGTTGTTACGGCC 59 16910961 16910979 TTGTCTAGTGGTTGCTCCC 59 NA Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 3 1 1 108 2R 16948474 16948492 GATAGGAAACTGGGCACGT 59 16948619 16948639 CACGGGTATGACTTTCTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4050 FBgn0020312 FBtr0071637,FBtr0071638 3 2 2 111 2R 17012649 17012670 GTTTATCAACCTGGCGAATCTC 59 17012499 17012583 GATGTAAGCTTGAACATAGTCACTC 60 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 2 3 3 115 2R 17068988 17069007 AAATGTTCTCCATGTGCGAG 59 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0273207,FBtr0071707,FBtr0301557,FBtr0071706,FBtr0273206,FBtr0071705 3 6 6 84 2R 17299915 17367607 GCTCAAGATCAGAAATCGGTG 59 17299851 17299874 CGTCGATATAGATTTCATCATGGG 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071858 2 1 2 99 2R 18509793 18515310 CAACGGACGACAGTTACAG 58 18515373 18515391 ACAACGAGGGAGTACTGTG 59 NA Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 3 2 2 83 2R 18543965 18544135 CTCCTTACCATGTGCTGCT 59 18543900 18543918 GCAGATGACCTTGCAATCG 59 NA Nonspecific Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315 3 1 5 91 2R 18598036 18598057 AACTGGTCATCATTGGATTCAG 58 18598109 18598175 GACGAAACGAATCCGTTCC 59 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 3 4 4 140 2R 18693057 18693181 CCCACTAAAGTTACAGTCAAGTC 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 3 4 13 85 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817835 18817922 TCTTCCAGCAACTCATTGC 58 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302766,FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763,FBtr0302770 1 10 13 127 2R 18814859 18814878 CTACTACGAGGTGAAGGTGG 59 18814968 18815054 CGTACTCGTCGATCTCCTG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 12 13 82 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566008 19566084 GCATGTCGATGAAGCTCTC 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089505,FBtr0089503,FBtr0089504 3 3 3 260 2R 19595975 19595993 AATCGCGAATCGCAAAGAC 59 19596356 19596377 TTGAACATGGACTTGATCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 2 2 8 88 2R 20887597 20887617 AGGTCATCCAATTTCTAGCCT 59 20885212 20885811 CGAGAAGTTAATGAGCACGG 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092 3 2 3 93 2R 20925045 20925236 GATTCCTAGACACATCCAAGG 58 20925291 20925309 TCCATATACGCCTCGTCTG 58 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 3 3 3 80 3L 185059 185138 AACATCTTTCAGTACGCTGG 58 185179 185199 CACCAATTTAGGAGCTAGACC 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 81 3L 301612 301630 GAGTCCTACGGTATGGGTC 58 301673 301769 AGAAGCTTATAGCTTCCTCGT 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 1 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 3 10 10 81 3L 301612 301630 GAGTCCTACGGTATGGGTC 58 301673 301769 AGAAGCTTATAGCTTCCTCGT 58 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910 3 1 6 81 3L 982228 982246 CCTGCATCTCTATGGTCTG 57 982289 983845 ACCAAAGAACTCCTTGATCAG 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 3 6 6 80 3L 998727 998837 GACATCGTCTGGATCTGAG 57 998665 998685 TGATCTCCTTGATGAGTAGCT 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072645,FBtr0072644 3 2 6 98 3L 1024533 1024551 CTAAGTTTGCCGTGTGGAC 59 1024395 1024473 TCTTAACCCAAATCTGCTTGG 58 NA Drosophila melanogaster 61 Aplip1 FBgn0040281 FBtr0072626,FBtr0072627 2 2 2 90 3L 1196583 1196601 TTGAGCCACATACGATTGC 58 1196653 1196954 TCATCGTTGGGAATTAAGGAG 57 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705 3 1 3 158 3L 1527316 1527334 CATTGTGAGCAAGATCGCC 59 1526385 1527194 GAGTTCGTGAGTCCTCTCG 59 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 metl FBgn0035247 FBtr0072814 1 1 2 92 3L 1638909 1638927 TGTTCGAGTTTAACGCCTG 58 1638781 1638801 TCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300715,FBtr0300714 1 2 4 106 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878031 1881138 GTTGCTGTCCTCGAATCCT 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2162 FBgn0035388 FBtr0300175,FBtr0072981 3 2 2 80 3L 3039189 3039210 AAGTTACTCCAAGAACTGACTG 58 3039248 3039337 AATGTGAAAGACCGTATAGTCC 58 NA Drosophila melanogaster 61 CG11537 FBgn0035400 FBtr0073115,FBtr0073116,FBtr0113132,FBtr0113133,FBtr0073117 2 5 5 86 3L 3131166 3131184 GAGTGTTCATCATGCGCTG 59 3131026 3131120 TGGTTGAGAGTCGATATTATGGG 59 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073063 3 1 2 278 3L 3319882 3319900 TCCCGTTTATGCTCATCGA 58 3320751 3320769 TACCAATGACCAGCCACTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 1 3 3 91 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247504 4247522 ACATCAAAGTCGAGGACCA 58 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 3 2 2 91 3L 5138227 5138304 ACCACAAAGGGTTATGCGA 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 1 2 5 121 3L 5160148 5161358 CAAACAAATGTTACGGCTTCG 59 5160047 5160065 ATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 2 6 6 80 3L 7527256 7527345 AGGATTTCAAGGATCCAAACG 58 7527385 7527405 CCAGCAGATCTAGCAAATGAC 59 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076766 2 1 2 116 3L 7967277 7967416 CAAGTAGTTCAAACAGCATCAG 58 7967182 7967201 TGCTACAGGAGAATTTGGTG 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114549 2 1 9 195 3L 8351807 8351960 TATCAGTTACGTCGTCGGTC 59 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA InUTR Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 3 3 13 166 3L 8627806 8627827 CATGACAGTATCATGAAGCAGC 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 CG4476 FBgn0035969 FBtr0076429 1 1 1 61 3L 9207843 9207862 GGTCAGGAATTTCCATTGGT 58 9207948 9207969 CCAATAATACAGCCCGATACAC 59 NA DesignNoJunction Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435 1 2 3 85 3L 9636634 9653749 CGATAAAGAGGATGACAAGGTG 59 9636570 9636588 GTTGTTTCGACAGGAAGCG 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 3 3 4 174 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856553 9856572 AATGATCTCATAGACGGCTC 57 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0113158,FBtr0113159 3 2 4 95 3L 9894108 9894450 TTCGCTTAAGAATCCCGAG 57 9894509 9894527 TTTCTTAACATGTCGGCCA 57 NA Drosophila melanogaster 61 CG12362 FBgn0036082 FBtr0076282 2 1 2 119 3L 10405983 10406001 GCCTCCAATACGATTCGTG 58 10406143 10406162 TCCGAGAATTCCATTTCGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 3 2 2 82 3L 11075551 11075634 GGACTTCAGAATATACCTTGTCG 58 11075491 11075509 AAATGGCATGTGCCATAGG 58 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 2 4 5 126 3L 11109614 11109778 CACCAACTGGTACAATAAGCG 59 11109442 11109461 GGAGTCTGGAACAGATCCTG 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302697,FBtr0302699,FBtr0302696 3 3 5 128 3L 11219782 11219802 TACCTATGATCCCATGAAGGC 59 11219891 11220781 CGTGATGGTCTTTCGAAAGG 59 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300726,FBtr0300097 3 2 3 155 3L 11684343 11684425 GAGCAGCAATATAAATAGTGTCCTC 59 11684212 11684230 TGTAAAGCGGCTAGACTGG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 3 5 5 117 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694509 11694589 GCTGTCATTTACATGCGAG 57 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 2 6 6 85 3L 12208895 12209529 AAAGCAAATAGAGGTGCCA 57 12208828 12208846 TTTGTCCTTTGACCAGGAC 57 NA Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 2 2 2 80 3L 12781717 12790790 TCATGGAGTATTGCAATGGC 58 12781656 12781675 AGAGTCTAACGGTATCCTCG 58 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 1 2 3 82 3L 12838945 12840159 ATTAGCCACGGAACTTCGA 59 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 3 3 5 142 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474448 AACCATCTGGGATATACTGGC 59 NA Drosophila melanogaster 61 CG10741 FBgn0036373 FBtr0075810,FBtr0075811 3 2 2 135 3L 13494306 13494395 ACTCTACAGATATGGCGATGTG 59 13494491 13494509 TTAGGTGTACCACTTGGCG 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041 1 1 6 95 3L 14223199 14223287 AAGATTGTCTGGAACTGCTG 58 14223345 14223363 CATATTCGGTCTTGGTGCG 59 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099992 3 1 2 80 3L 15075729 15075747 TCCAGTTCGCTAATGACCA 58 15075601 15075688 CACATAAATGTCCAATGTTGGG 58 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543 3 1 3 103 3L 15806420 15806440 CCCATTATTCTGTGCTTTGGA 58 15805333 15806358 ATATGCTTGTTCTTGCCTAACG 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 1 4 4 65 3L 16346788 16346806 ATCATCAACTTCACCCGGT 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9674 FBgn0036663 FBtr0075341,FBtr0075344 2 2 4 86 3L 16785598 16785616 AGAATGCCGGATTACCCTG 59 16784780 16785549 GAACAATCACACGTGATCGT 59 NA Drosophila melanogaster 61 Oatp74D FBgn0036732 FBtr0302041,FBtr0075173 2 2 2 129 3L 17503755 17503773 CCCTGTCCCATCATCTACG 59 17503862 17504022 CCGTGATTCCTAGGAAATATTGC 59 NA Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0075111 1 1 3 82 3L 18594996 18595017 CATGTCAACAATCTTCAGAGCT 59 18594769 18594959 CCTAGATCTTTCTTTAATAGTCGCC 59 NA Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035 1 1 2 80 3L 19063196 19078437 CGTAGTTGCTTTACAAGATGG 57 19063136 19063154 CTGTGCGTCTGATTATCGT 57 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 2 3 3 85 3L 19252661 19253225 CATTCTGGCAGGTTATCCG 58 19252594 19252614 CAAAGAACATGTGATGCACTG 58 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 1 3 4 104 3L 20253579 20253971 ATGAGAACGCTATCCGAGC 59 20254039 20254057 GGTTCTGGAAGATCTGCCA 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 3 5 5 147 3L 20381809 20381827 CAAGCTGGTCTACTTCGAG 57 20381938 20383024 ATTGTCCATCTGTAGGTGC 57 NA Drosophila melanogaster 61 CG11796 FBgn0036992 FBtr0078226,FBtr0078225 3 2 2 149 3L 20432115 20432191 GCTACCATCAAGACGTACG 58 20431984 20432004 CACGTGATCAATGAAGTTCAG 57 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078303 3 1 4 83 3L 21208138 21208156 CCAGTCCAACTCCTCATCC 59 21208201 21208481 TGACGATGTTTCAGTGAATCG 59 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 1 3 4 116 3L 21488958 21489528 AAGTGATTCTGTGCAGCAC 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 3 3 5 154 3L 21914293 21914311 GATTCGCCAAATATCCGGC 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 2 2 2 111 3L 21959323 21959341 AATTGTCCGCTTGGATGAG 58 21959413 21960242 GTCGAAGAAGATGTTAGTTTCC 57 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 1 2 2 144 3L 22056138 22056786 AAAGGTTGCATACAGGTCTG 58 22056891 22056911 CCTCAATGAACTGGTTAACCC 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0078496 1 1 2 80 3L 22274819 22274837 AGTCGCTCATTGACAACAG 58 22274879 22275677 CAGTAAAGTGATGGTAGTCGT 57 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669 2 1 2 86 3L 22671744 22671762 GGAACTGATTGTGCTGCTG 59 22671812 22672164 TTGATGTAATCTGGCGGCT 59 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 2 4 4 88 3L 22709292 22709406 GTCAGTAAGGATCCAAACCC 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111146,FBtr0111147 3 2 3 78 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24535534 24535553 ATTGCTAACCGCAGTTACTC 58 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG11739 FBgn0037239 FBtr0078915,FBtr0078913,FBtr0078916,FBtr0078914 2 4 4 176 3R 206342 206431 TACCGGGAATGACACTGAC 59 206570 206589 TATCCACTTTGATGTCCGCT 59 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 2 4 4 89 3R 293415 293433 TCTACTACATGATCGCCGC 59 293285 293365 CGAATTGAACCATTTGGAAGGT 59 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 3 3 3 96 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526042 526890 GCATGGTCGCTCATAACAC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 6 10 83 3R 570241 570259 AAAGTTTGGAGGTCTTCCC 57 569895 570197 TTCAGTTGAGTATCCATATCGG 57 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0100434 1 1 2 80 3R 1181951 1182159 CTCAACTAGATGAACCAACGC 59 1182201 1182219 CACGATTGAGGACATTGGC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829489 1829507 GTCACCGTGAATAGCTCCA 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0081572 1 1 3 90 3R 3017773 3017791 GTTAGATGCCTTGGAGCAG 58 3017845 3018271 AAATGCCGAGCTTGATGAC 58 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 2 3 3 95 3R 4184857 4184932 GGCTGCTAACGATATGAACG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112822 1 1 8 127 3R 4659861 4659879 AATGCGTCCCGTAATATCG 57 4659452 4659707 TGATAGCGTCTGTATTTGCC 58 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 2 2 2 69 3R 5341137 5341155 AAGTCTTCCCTAGTCCGGA 59 5341035 5341053 CTCACTACTGTCTCCAGGT 57 NA DesignNoJunction Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 2 2 3 90 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367654 5367673 TTATTCCCGTTGTTGTAGCC 58 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 3 4 4 95 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401211 5401230 GTTCATCGTTAGCCTATCGG 58 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 1 2 2 75 3R 5826674 5826694 TAATGAACAACGTTATGGCCG 59 5826561 5826579 TCACTGGTCCACTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 2 5 9 80 3R 5834565 5835033 CTACGAAGGTTCAAACCGAG 58 5834504 5834523 AGTCGGTGGATATCTCAGTG 58 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082196 2 1 6 82 3R 5930840 5930859 AAGGTGATTGGCAAGAATGG 58 5930698 5930799 GGTATGTTCTGATCCTTGATTCG 59 NA Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 3 2 2 81 3R 5998355 5998374 TCTTCCTGATCATGTTGCTG 58 5998140 5998314 TTCTCGATGATCTCTGTATTGG 57 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 2 3 8 106 3R 6359726 6387644 TACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 1 3 8 105 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359639 6359657 TACCGAGGAAGACTGAGGA 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 2 3 5 86 3R 7048442 7049127 ACAAGAACTGGTACAAGAGCA 59 7049175 7049193 TCTCGATGCTCTTCTTGCC 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 1 3 5 81 3R 7048437 7049125 CTTCTACAAGAACTGGTACAAGAG 59 7049165 7049183 CTTCTTGCCGAGATCATCG 58 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 3 3 3 190 3R 7279014 7279184 AGATTGGAGAACCGAACTG 57 7278842 7278860 TTATGTGGGTAAAGTGCGG 57 NA Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 1 2 2 109 3R 7326958 7329142 CAATACTTCGGCCATCTGG 58 7329215 7329233 GCAATAACCTCCCGATCTG 58 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100323 2 1 3 110 3R 7390245 7390263 AAGAGCATCATCACCCTGG 59 7386919 7390172 GGGAATTAGGGTGATCAGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 1 6 6 80 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460709 7460788 CGGCTAATGGAATTCTGGG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082556 2 1 2 80 3R 7836017 7836035 CTATTCGGCGAGAGTTTCC 58 7835857 7835975 ATCTTCAACCTTTAGGGTGAC 57 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 3 3 3 102 3R 7936145 7936163 TTAGCGATAGTGACGAGCG 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 3 5 5 75 3R 8270796 8270814 CCTACCTCATGGTCACCTC 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 2 2 3 81 3R 9484277 9484367 TCAACAAGGGTAACCAGGG 59 9484214 9484232 ATATTTCCACCCTGGCCAC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 3 8 8 146 3R 9487574 9487894 GCTTTGTGGAATTCGAAGAC 57 9488068 9488086 CATATCGATCGTCGTAGCG 58 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 1 3 3 80 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610090 9610110 ATCATCGATCTGGACACTGAG 59 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 2 3 3 83 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610094 9610113 TGGATCATCGATCTGGACAC 59 NA Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889,FBtr0082888 1 2 2 80 3R 9917053 9917074 AGGATTATTTGTGATCTTCGCC 59 9917115 9917540 TTCGATTTGGATTTCGGGC 58 NA Nonspecific Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 1 2 2 92 3R 9945942 9946017 CATTGAGAAGGTGGTAGCCA 59 9945869 9945887 TTCTTGAGCACGTACAGCA 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 2 2 2 60 3R 11056767 11056786 GGATCCTTGGCCTATATCCT 58 11056809 11056893 TTGTAATGGAGGTTTCGGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 3 2 2 68 3R 11170641 11170659 TAAGGTCGACATAGCGGTG 59 11170526 11170544 AGAATGGAGTAGGCAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 2 3 3 92 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191418 11191500 CCAGATTAATTTGCTCGTTGC 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083233,FBtr0083229 2 2 6 164 3R 11895717 11895736 GGCTCTATCAGTGATCTGGA 58 11894324 11895590 CTTGGCGTTATTTCTCGGG 59 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113477 2 1 2 116 3R 11995734 11995820 GTCGCTACTGAACAAGATCG 58 11995899 11995917 TCTGTCTTCTGACGCACAG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 2 3 5 134 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391565 12391583 CCTGATCTCCCTTGTGTCC 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083334 3 1 6 99 3R 12460104 12461279 GTTTATGAACGAGAATGCTGAG 57 12461339 12461357 TGTCAGGCTATTGATGTCG 57 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0300610 2 1 2 266 3R 13059261 13064644 CAATATTCCCGTCAGCACG 59 13059013 13059031 TAGAGATCGCCAATTTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0300610 3 1 2 267 3R 13059262 13064645 ACAATATTCCCGTCAGCAC 57 13059013 13059031 TAGAGATCGCCAATTTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 3 4 4 83 3R 13678332 13678350 GTCGATCTGGTACGGAGTG 59 13678396 13678746 AAAGAGCATCCCAAGAACCT 59 NA Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611 1 1 3 190 3R 14022833 14024433 AACAACAAAGTGGTTGTGCA 59 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7131 FBgn0038598 FBtr0273358,FBtr0083597 3 2 2 81 3R 14112830 14112849 CAGAAACTTAGCTACGGACC 58 14112707 14112725 GAAAGGTGCCATCGTTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 1 5 5 80 3R 14587368 14587390 GTTTGTATCCAGGGAACTATCTC 58 14586863 14587330 AAAGTTGAGACGTCCATTGTC 58 NA Drosophila melanogaster 61 CG31226 FBgn0051226 FBtr0083675,FBtr0083676 1 2 2 130 3R 14677252 14677270 TTTAACTCCTGGTGCGGAG 59 14677087 14677159 CTTGCAAGAGATGTTCAGCA 58 NA InUTR Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492 3 1 3 82 3R 15464464 15464633 CCATGAAGGAGTCGTTATGC 58 15464401 15464422 CTTATTGGTCAAGTAATGGGCC 59 NA Drosophila melanogaster 61 CG4465 FBgn0038750 FBtr0083851 2 1 1 100 3R 15742828 15742846 GACTTCAGTCTGCACTGTG 58 15742691 15742709 TTTCCCGCTGTTATGTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17193 FBgn0040571 FBtr0083838,FBtr0300810 1 2 2 135 3R 15865450 15875384 CAATTATTACAGTGGTCACTCG 57 15865336 15865354 CTTCTTCTGGCACTTCTCG 58 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 3 4 8 89 3R 16144000 16144712 CCTACAAAGAATCGCAAATTGG 58 16145299 16145317 TTCCTGTTGAGTTTAGCGG 57 NA Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 1 3 3 106 3R 16526040 16526323 TCTTCAAGGTTTGGATATTCGG 58 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 1 2 2 80 3R 16727881 16727899 TTGGCTTCATCCTAACGAG 57 16727943 16728161 TCTCATAGACGAGACCCAC 57 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 2 3 3 114 3R 16837649 16837667 TACAGTCGACAAGCTGGTG 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 2 5 5 80 3R 17349340 17349360 TGTGTCATAGGCAATGAATGC 59 17349402 17349483 TCTCTTGTAGCGTGTTCCC 59 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077 1 1 2 80 3R 17701335 17702302 CTACGCATGATATCCATAATGAGC 59 17702339 17702359 GGGTAGCACATTCTTGTTCTC 59 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264,FBtr0084184 1 2 2 86 3R 17856593 17856611 CTTACAGTCCGGACTTCAC 57 17856450 17856543 GGGCATACCAGCATATGAC 58 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084282 3 2 3 113 3R 18372512 18372531 TGGACATTCTGGAGTACGAC 59 18371490 18372436 TCAGCACTTCCGTCATCTC 59 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0084300 3 1 2 112 3R 18500548 18501674 CTGAACAGCCGTAGATGCT 59 18501749 18501768 GATTTCTGGCGAACGAAGAC 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392 2 1 7 124 3R 19035344 19035362 TTGAAAGCTCTGGAGGAGC 59 19023686 19035072 CGTATGTATTCACCAGTTTCGT 58 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 1 2 6 173 3R 19093390 19093550 TACGTGTGAATTTGCTGTCTG 59 19093237 19093257 GCTCGTAGTTCCTGTTTAGGT 59 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084425 1 1 3 90 3R 19344240 19344258 CAATTGTGCCGAATAGGCC 59 19341198 19344186 AAATTGCGAGATCTGCAGC 59 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425 3 2 3 105 3R 19340174 19340193 TCGCTTTAACGAAACCACTC 58 19340035 19340106 AAAGGTGGTTTCTGGTGTG 58 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 1 4 4 80 3R 19554869 19555664 CTGTGAAGAGAAGCCTGGA 59 19556384 19556402 GTTATTCTGTAGGCGCAGC 59 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0084578 1 2 7 82 3R 19985037 19985221 CAATGGGAACCCGTATAACG 58 19984974 19984998 GAGATCAGCTCCTAATAGTAATTGG 58 NA Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 3 2 2 80 3R 20062223 20062550 CGAATTGGCTCAGGTTCTC 58 20062593 20062612 TCCATTAAAGGCGTTGAGTC 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301368 3 1 6 91 3R 20079842 20080141 CGCGGTACTTGAATAAATCCG 59 20079771 20079790 CTCCGAGTACTTCCACTTGG 59 NA Drosophila melanogaster 61 CG5794 FBgn0039214 FBtr0084668,FBtr0084666 1 2 3 80 3R 20464514 20464534 TTGTGTCCTACACCAGTAGTC 59 20464387 20464477 CATTGTCCACGAGTATCTTAAGAG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100624,FBtr0100638,FBtr0084684,FBtr0100627,FBtr0100634,FBtr0100622 2 7 18 80 3R 20521107 20521126 AGACGCTGATCAAGAAATGC 59 20521837 20528754 GAGTGATATCACCTAAGTCATCGA 59 NA Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 3 2 2 93 3R 20570003 20570514 TTTGTTGAAAGCGGAAACGT 59 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 CG4743 FBgn0039357 FBtr0084933,FBtr0301166 2 2 2 82 3R 21505842 21505860 TAGTTCGGTCACCCAAACC 59 21505715 21505796 GGATCAAGCATGCCAACAC 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113388 3 3 7 103 3R 21532085 21532103 AGCTCCCAGGATTAACGAG 58 21531749 21532019 GGATACCCAGATCTTCGACG 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290138 1 1 5 82 3R 21746256 21746338 TTAGAATACGAACCTCACAGTG 58 21746381 21746399 ATTGTAAGTAGGGCTCCCA 57 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084966,FBtr0084963 3 5 5 83 3R 21871476 21871494 GTGAGAAGTATCGCACACG 58 21871538 21872267 CTTCATCCTCTTGCAGTTTCTC 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 2 4 5 131 3R 21870340 21871201 ATCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 2 3 3 83 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293939 AAAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 1 2 10 80 3R 22423776 22423797 AGACCCAGGATGATAAAGAGTC 59 22423835 22424309 GCTTCTCAGCATTAATCATGGA 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 1 2 3 118 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687904 22687923 AGTTTACATTCCGTGGTGGA 59 NA Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 2 1 1 191 3R 22851772 22851790 GGCAATCTTTGCTCTAGCC 59 22851529 22851547 TAGAAGTTCACGGGAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0113296 2 1 3 81 3R 22886888 22886972 AGCCTAGGCCTTAAGAAATCC 59 22886827 22886845 CCATCGCATAGATGAGGCT 59 NA Drosophila melanogaster 61 side FBgn0016061 FBtr0289998,FBtr0085168 2 2 2 93 3R 23212947 23214185 AATGATCAGGCGACATCTG 57 23212872 23212890 ATTGATATTCACGTCCCGG 57 NA Drosophila melanogaster 61 Moca-cyp FBgn0039581 FBtr0085286,FBtr0300346,FBtr0085287 1 3 3 109 3R 24168519 24168608 CGAGATACCAGAGGTATCGA 58 24168680 24168698 GATCTTTGCCTCGATCACG 58 NA InUTR Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299744 3 1 13 116 3R 24720769 24726551 CGACGTGTGAGTATAATTTCGA 58 24726628 24726646 TGTAGCGGTATTTGTGCTG 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 3 7 13 121 3R 24726632 24726650 ACAAATACCGCTACAGGGA 58 24726735 24745222 CTTTGCTGTCTTAGCCTGC 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 1 4 5 82 3R 25297568 25298892 AGAACTTACGACCCTACACC 58 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085431,FBtr0085430,FBtr0085432,FBtr0085429 1 4 4 84 3R 25325967 25326046 GCTATCAGGAAATGTATTCCGC 59 25325904 25325922 TGAACGTACAGCCATTTGC 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 2 4 5 82 3R 25653847 25653868 CTCATATGCTCTGTAAGAGACG 58 25653707 25653805 TGTTCGTTTGTAAACGTGGA 58 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0085593 1 1 5 106 3R 25871497 25871619 CCAACCTGCTTCAAGATGAC 59 25871410 25871430 GACAGCTTAGCATATCGATCC 58 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 1 3 3 80 3R 26184097 26184115 CTATCCACTGGTTGATGGC 58 26184158 26185711 CGTCCCTCGTATTTAACCTC 57 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085635,FBtr0085631,FBtr0085634 2 5 5 81 3R 26212315 26213203 CCTATGGAGATTTCAAGTGCTC 59 26212255 26212273 CCCTTTATGCAGGCATCCT 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 1 5 5 81 3R 26289005 26289024 TCTGCTCTATGACATCTCCA 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG31012 FBgn0027598 FBtr0085704,FBtr0085706,FBtr0085707,FBtr0085705 2 4 4 117 3R 26650595 26650683 AGTTCCTATGACTGGTAACCT 58 26650762 26650780 ACCTGAAAGCATCTTGCTG 58 NA Drosophila melanogaster 61 stops FBgn0086704 FBtr0301346,FBtr0085782,FBtr0085781 3 3 3 101 3R 26991969 26991989 CGGGCTATGGTTTACTTTCTG 59 26989348 26991908 ATCAATGAATCTGAGCTGTCG 58 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 3 5 5 82 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427004 27427022 GCTCGTACCACATCTTCAG 58 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 2 3 6 80 3R 27554133 27554154 CCTCGAAACGATCAAAGAACTC 59 27554193 27558653 TAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 1 2 3 81 3R 27637149 27637168 AATATCCACAGTACAGCTGC 57 27637032 27637105 GAGGGCAGATTATTGCTCC 58 NA Drosophila melanogaster 61 CR13656 FBgn0039307 FBtr0084817 2 1 1 83 3R 21094666 21094686 TCAGAGAAATGGACATGTACC 57 21094733 21094751 CTGCAAACATCTTTCGGGA 58 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300798,FBtr0300796 1 4 7 80 4 261388 261410 CTAAGGGTCAGTCTATGTATGTC 57 261449 263095 CATCATTCCCTTGAGATCCA 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 3 3 6 92 4 637969 638983 ATTTAAACGTGACGACGCC 59 639033 639057 CGAATTCCCTTATAGCTTGATTAGG 59 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 1 8 8 80 4 671649 672944 ATCTAACAGCACAGATTGATGG 58 671590 671608 AATACGGGTGAAAGCTGAC 57 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100342,FBtr0100343,FBtr0089327,FBtr0100345 1 5 8 93 4 1128886 1128908 GATACGTCTATGCTTTACGACAG 59 1128960 1129108 AACCTGTTCCAATGGAAGGT 59 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 3 2 4 148 U 1183496 1184087 GACTTCGTGTTGTGGTACC 58 1184198 1184217 TGATGTATAGTACTCCGCGG 58 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114272 3 1 4 155 U 3443378 3443398 CTTGAAAGTGTAGTGGTCACC 58 3443515 3448775 TTTGCAGACCCTTCTTCGT 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 2 2 4 62 X 227605 227625 GATCAGGAAGCTATCCATCAC 58 211927 211945 CATCACCATGTCGCTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442 1 1 4 91 X 312536 364446 GAATCTCAGGTGGCAAGTC 58 211915 211933 ATCATTTGGCTCCATCACC 57 NA InUTR Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328,FBtr0070077 1 2 2 86 X 373901 373919 GATGGATCTCTGCGAGGAG 59 373966 374071 CGATTACCAAATAAAGTCACGC 58 NA Nonspecific Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 2 2 2 80 X 818647 818787 GGACAACACAGTCAATATCCA 58 818587 818605 TAGTAGATGTAGCGCAGCA 58 NA InUTR Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 1 3 3 104 X 1237550 1237568 GGTCACCAAGGCCATAGAG 59 1237879 1237897 CCCAAGTTCTCGTAGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454 3 1 2 61 X 1760124 1760142 GCTGCAGGGATCTATCCTG 59 1760167 1760232 GGTAGGCGGTTAGACTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 3 2 2 118 X 1948465 1948546 AACCCATGGAAAGAACCCT 58 1948623 1948646 GGTAAATAGAGGATGCATTTGAGG 59 NA InUTR Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 2 6 7 78 X 1965424 1965442 CAAGGAGTACAAGACCACG 57 1962428 1962446 CTTGGACTGGTAGGAACCC 59 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 cib FBgn0026084 FBtr0070640 3 1 3 102 X 4003950 4003968 CAACAGTCGATCTTCGAGG 58 4004032 4004204 CTCCTTCTCCTTCCTTATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 3 4 4 92 X 4619144 4619163 TCCAGCACTATGACTATCCC 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 3 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 1 5 6 105 X 6701674 6702857 CAATTATTCCACGTTTGGGTC 57 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 Trxr-1 FBgn0020653 FBtr0071168,FBtr0071167,FBtr0071169 2 3 3 94 X 8140691 8140709 GTCGAGTATGGCATCACCA 59 8140767 8140856 CACTCCAAGCCAATGTAGC 58 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 3 4 4 81 X 8459190 8459423 GATACTGGGTCGAATCATTCAC 59 8459463 8459483 CACCAGATGTTCGAAGTTCTC 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 2 4 6 93 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918297 8918315 CTTGTTCATGTAGTGCACG 57 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 2 4 6 117 X 9005031 9005126 GAGCATGGATTTAATCCAGC 57 9005449 9005467 GAATCTGTCGGATGAGGTC 57 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0112965,FBtr0071298,FBtr0071295,FBtr0071297 2 4 6 117 X 9005031 9005126 GAGCATGGATTTAATCCAGC 57 9005449 9005467 GAATCTGTCGGATGAGGTC 57 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 1 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 1 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112966 1 1 2 167 X 9782737 9782826 TTCTATTAGTGGAGAGGAGAATGG 59 9782525 9782611 TACTTGGTGGCGTTTAGGG 59 NA Drosophila melanogaster 61 spri FBgn0085443 FBtr0112689 3 1 4 103 X 10416905 10416923 TCTGCGATTCGCTACTCAG 59 10413795 10416840 AATGGGTTCACTTGTTCTTGC 59 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 3 2 2 109 X 10674143 10674237 ACAAATCGGTATTCCTCGG 57 10674052 10674070 AACGAAGCACAGAGATGTG 58 NA Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429,FBtr0073431 3 2 3 171 X 10986856 10986874 CCATTTCCACCTGAGACAG 57 10987126 10987144 TGGCGAAAGGTGTATTCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 2 5 5 151 X 11027593 11027611 TAATGGAAAGGTGCAGGAC 57 11027384 11027478 GAAGATCGAAGACCTTGCC 58 NA Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 3 2 2 85 X 11040024 11040043 AAGTCGATATCAAGGATCGC 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 1 6 6 80 X 11231085 11231169 GCAATATAAGATTGGATCGCTG 57 11231026 11231046 TCCAGCTCATTTCTCATTGTC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 1 1 15 80 X 11290127 11294829 CAGTCGACAGCCTTTATGC 59 11296742 11296765 TAACTCCACCCTGTAGATAATCTC 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484,FBtr0301288 3 2 15 85 X 11270677 11270695 TCTGGTCAACGATCTTCGG 59 11270742 11270885 CCGATGAGCTTTCTGTATGTC 59 NA Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 3 2 2 101 X 11476640 11476658 CCTCTTCACTTGCACTTCG 58 11476498 11476576 TCGCCTAGTCTAATCAGCTG 59 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 2 3 3 80 X 11499098 11499180 CCACGATAATTATGAACTACTCGG 59 11499219 11499237 AGTCGGTGAAGCAGAAGAC 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073584,FBtr0073587,FBtr0073586,FBtr0073585 1 4 10 84 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848301 11856057 TTGATTGAGTTCGACCCGA 59 NA Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 2 2 2 82 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924720 11924738 TGCTCAAATGGAATGCCTG 58 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 2 2 3 80 X 12329314 12329332 ACAGAAGACCAGCAATTCG 58 12329375 12330062 CTCTGTTTGTAGCGTGTCTC 58 NA Drosophila melanogaster 61 Cpr11B FBgn0030398 FBtr0073653 2 1 1 75 X 12447495 12447516 TCGTTAGGAGCGATTATAACAG 57 12447661 12447681 CGGTGAATACCATTACCAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 3 6 6 86 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545564 12545584 GGTATGATCGAACCGTATGAG 58 NA Drosophila melanogaster 61 RpS15Aa FBgn0010198 FBtr0073792,FBtr0073795,FBtr0073793,FBtr0073794,FBtr0300828 1 5 5 116 X 13230405 13231548 AACAAATCCAGCCATGGTG 58 13230307 13230325 ATGATCACCTTGGAGCAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32631 FBgn0052631 FBtr0073799 3 1 1 126 X 13450704 13450722 AAAGGACGATCCCATGGAG 59 13450917 13450936 ATTCACATTAAGGCCATCGA 57 NA DesignNoJunction Drosophila melanogaster 61 ben FBgn0000173 FBtr0073855,FBtr0300566 1 2 2 152 X 13890549 13892140 GTTACGATCTCAACGAGAAGG 58 13892254 13892272 GAATGGCATTGATCCCAGG 58 NA InUTR Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089293 3 1 2 104 X 15284935 15286415 CAACGGATTGAAGGCTTCC 59 15284849 15284867 GAACTTGGAGTGCATCTCG 58 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 1 2 2 88 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403812 15403830 GTCAATCTTGTCCGTCTGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 3 5 9 135 X 15714505 15714523 GAGAACCAGGAAGCAAGTC 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 1 6 9 185 X 16270362 16270692 CAGTGGTATCTGAATGGCG 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074281 3 1 3 151 X 16344621 16345314 AGAGGATACAATGATCGGCC 59 16345428 16345446 AAGTTGTTGTAGCGATCGC 59 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298 2 2 4 85 X 16380926 16381923 TTATCATGATCACAAGGACCG 58 16380861 16380879 ACACGATCATGAAGCTGTG 58 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 1 3 3 80 X 17462412 17462431 GAACCAATTTACACGGAGCA 58 17462283 17462370 GGTCTTAACGTCTTCAGTGG 58 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 3 2 2 117 X 17568968 17569360 ATTACCTGATGACCAGGGAG 58 17568870 17568889 TTACCAGTACCTCCAGTTGC 59 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510 1 1 4 172 X 17767420 17768445 TTATACTATGTCCGCTTATGGG 57 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 1 2 7 80 X 18004587 18004605 CAACGCGTATACAGTTTGG 57 18000953 18004544 GAGATCGTTGATCTCTTGGG 57 NA Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 1 2 2 80 X 18548885 18548903 CAACATCTTCTGGTCGGTC 58 18548757 18548842 TACTCTTCGCGAATGTTCAC 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 3 3 4 87 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228546 19234543 TGAAATAAGTTCCGAGCAGC 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 3 3 4 87 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228546 19234543 TGAAATAAGTTCCGAGCAGC 58 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 3 2 2 60 X 19565027 19565046 CAACATCAAGCAGATCTGCA 59 19565154 19565172 AGGCTTCTCGATAATCACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074810 2 1 2 82 X 19636928 19637485 CGCAAACAATTTCGATTTGC 57 19636865 19636883 GATCCCGCTGATAGTAGGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 2 4 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 3 2 3 160 X 20543396 20547855 AAAGACATCGCAAGTCCGA 59 20543254 20543274 GATTGGTTGGAATCCTCTGGA 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112569 1 1 5 80 X 20663761 20676869 AGTGAGTAGATCATCGGTGTC 59 20663701 20663722 AGTAATATAACCGTTGCGTTGG 59 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077251,FBtr0077253 3 2 4 116 X 20990665 20990689 CTCTAATAATGATATCCTCCAAGCG 59 20990879 20991014 GCTTTCAGCTCCAGTTTGG 59 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299526 2 1 5 83 X 21900381 21900399 TAACTCCTGACTGCGAACC 59 21900444 21902842 GAGAAGAAACCGGTTCTTTGG 59 NA Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301619 1 1 2 167 X 22397740 22406456 AAATCAGAGTTCCAAGACCC 57 22397592 22397612 GCATTATCTATTTGCGGAGAC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073626 2 1 3 199 X 11985544 11985615 CACACCTTATACTTCTAGCGC 58 11985839 11985857 TCAAGTGTGCGTTTCTCAG 58 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113682 2 1 3 80 XHet 14995 20030 GCCCAACGGTAATGAATGG 59 20074 20092 GTACAGTTACGGGCATCGA 59 NA Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300806 1 1 2 154 XHet 47490 51938 CAAAGCAACTAGCAACGCA 59 52055 53589 GTTGATCCACCGTAAACAGG 59 NA Drosophila melanogaster 61 snoRNA:Me18S-G1620 FBgn0063389 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30505 FBgn0050505 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U27:54Eb FBgn0063387 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32272 FBgn0052272 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:84Da FBgn0011998 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31130 FBgn0051130 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31416 FBgn0051416 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-10S FBgn0082182 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:12Eb FBgn0011949 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:E FBgn0013692 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 1 1 1 60 XHet 62217 62558 GTTCGCCGTAGTCAAAGTC 59 62582 62600 GTCTCTGGTCAAGATCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17163 FBgn0039942 FBtr0113727 3 1 1 82 XHet 60673 60748 CCCATACAACCTAAGCAGGA 59 60610 60628 GCGTCAAAGGCCTTAATGG 59 NA Drosophila melanogaster 61 tRNA:S4:12Eb FBgn0011976 FBtr0073859 1 1 1 60 X 13909491 13909509 AGTGGTTAAGGCGTCTGAC 59 13909533 13909551 GTAGGATTCGAACCTACGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33963 FBgn0053963 FBtr0100004 3 1 1 60 X 12553624 12553643 TTCTCGTGTATCTTGTGGTG 57 12553663 12553684 AAAGGGAATGTAAGTTGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32660 FBgn0052660 FBtr0073592 1 1 1 80 X 11814605 11814697 AAAGTAGGGATGATGACAACTG 58 11814546 11814566 GGTACATGGATTTGACAGCTC 59 NA Drosophila melanogaster 61 Rab21 FBgn0039966 FBtr0299903 1 1 2 215 X 22414889 22414907 TAATTTCAAGGCGGTGCTG 58 22414631 22414649 TAGTAGATGGGTCCCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34334 FBgn0085363 FBtr0112536 2 1 1 60 X 22275628 22275646 CAGCTCCCATAACAATCCC 58 22275669 22275688 AGGAATTGGTACCGGAACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14618 FBgn0031189 FBtr0077351 1 1 1 127 X 21876263 21876281 CAATCACTTCAAGGGCCTG 58 21876371 21876481 GCTCAAACACATGGTAGGTG 59 NA Drosophila melanogaster 61 Hlc FBgn0001565 FBtr0077221 1 1 1 80 X 21258053 21258072 CGCCTTATTGAAGCTGAGAC 59 21257797 21258011 AATCGAACCTTGTAACACCG 58 NA Drosophila melanogaster 61 dod FBgn0015379 FBtr0077193 1 1 1 157 X 21216388 21216406 GTTCTCAAAGCGTGTTCGG 59 21216527 21216656 TAGCTCATTCCTGTGGAGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0299591 2 2 3 80 X 21006585 21006665 TCGTTCTGTTATATGTGCACC 58 21006704 21006725 GCTAATGAAGAATAGAAGGGCG 59 NA Drosophila melanogaster 61 CG15446 FBgn0031155 FBtr0300353 2 1 1 85 X 20972941 20973057 CTACGAAGCTGCTAGAATTATCC 59 20972878 20972896 GGTTGTTCGGATGCTTCAC 59 NA Drosophila melanogaster 61 CG32512 FBgn0052512 FBtr0077262 3 1 1 80 X 20937680 20937698 CCAGATGACTAGGCAGGTG 59 20935062 20937637 GTCAGAATTGTGTACAGGCG 59 NA Drosophila melanogaster 61 l(1)19Ec FBgn0001560 FBtr0299922 2 1 1 60 X 20753098 20753119 TAGTAATCGGAATAATCGACCG 57 20753059 20753077 GGCCAGATCATCCTTATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 3 5 5 81 X 20644230 20644251 TAACGCTAATATACAGGGTGGT 58 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 CG1695 FBgn0031116 FBtr0077308 2 1 1 112 X 20312304 20312433 CATCATGCCAGATTTGGCC 59 20312506 20312527 AGTAAACGAGTCGATAGAGCTC 59 NA Drosophila melanogaster 61 CG15456 FBgn0040650 FBtr0077323 2 1 1 72 X 20297848 20297866 TGGACATATCCTGTCGCAC 59 20297794 20297812 TTCGAGTGCACTAGCTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab10 FBgn0015789 FBtr0077337 3 1 1 89 X 20123495 20123585 TACGGAATATAGACGAGCACG 59 20123636 20123654 TGTTGACCACCCTCTTGTC 59 NA Drosophila melanogaster 61 CG12655 FBgn0031080 FBtr0070036 1 1 1 76 X 19853352 19853371 CATTGTTATCGGATTGGCAC 57 19852895 19852913 TTCCATTGTTCCAGTGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 vfl FBgn0259789 FBtr0074808,FBtr0074807 1 2 2 60 X 19672295 19672314 ACCAAGAACTGCTACCTCAC 59 19672254 19672272 GAAATGGGTACTCACCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 3 2 2 128 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092798 19093309 GGTATAATGTTGTAGACGCGG 59 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659 1 1 4 208 X 18690316 18690543 ATTCAGAGAATGAAGTGCCA 57 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ing3 FBgn0030945 FBtr0074614 2 1 1 91 X 18546958 18546977 ATCTGGAGATGATCGAGCAC 59 18546810 18546904 GTCCATGTTGTTCTGGACG 58 NA Drosophila melanogaster 61 CG15040 FBgn0030940 FBtr0074618 2 1 1 159 X 18504975 18505047 CTTCTTGCCAGCGAATACAC 59 18504776 18504796 GATGCAAAGGTATTCCGTCTG 59 NA Drosophila melanogaster 61 Tsf1 FBgn0022355 FBtr0074559 2 1 1 80 X 18284142 18284223 ATTTCAACGACAAAGCCGT 58 18284264 18284285 ACTGGAGATCTGTGTAGATCTG 58 NA Drosophila melanogaster 61 CG6123 FBgn0030913 FBtr0074578 1 1 1 94 X 18250021 18250039 TCGCTATAAACACGACCGT 59 18249019 18249965 GTTCGATTGCATTAATGCTGG 58 NA InUTR Drosophila melanogaster 61 Vps4 FBgn0027605 FBtr0074504 1 1 1 80 X 17802676 17802695 AAATAAGAACTACGCGGAGG 57 17802736 17802850 TGTGCCTCATATTTGATGGTG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 3 4 4 102 X 17743515 17743536 CTTCATAATCATCTGGCTGGTG 59 17743366 17743452 CTTGTAGACCAGCCTAGGC 59 NA Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477,FBtr0074478 3 2 2 117 X 17568968 17569360 ATTACCTGATGACCAGGGAG 58 17568870 17568889 TTACCAGTACCTCCAGTTGC 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 2 3 3 168 X 17357767 17357785 CAATGGAACTGCTCGAACC 59 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 mei-217 FBgn0028581 FBtr0299824 2 1 1 60 X 17035785 17036310 GAAACACTGGTCCTACAATCG 59 17035745 17035764 GTATGGCATTTCGCATACAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9634 FBgn0027528 FBtr0074359 3 1 1 80 X 16622034 16622052 CCACAATTGCTGACAAGGA 58 16621912 16621993 TGGCGTTAAAGAGATAACTCTC 58 NA Drosophila melanogaster 61 mthl1 FBgn0030766 FBtr0074314 2 1 1 82 X 16537472 16537490 GATGAGGTACCGGAGAAGG 59 16537535 16541813 CGTCTCAGTTGTGTTTAGCA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13014 FBgn0030759 FBtr0074282 2 1 1 65 X 16482385 16482403 AGTCGAGACGTTACTCCTG 58 16482432 16482450 GATTTACGGTCTGCAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069,FBtr0074277,FBtr0074276 1 3 3 80 X 16328105 16328126 GTTTGACTCGAACGATTATTCC 57 16328164 16328307 TTATAGCGATGAACCCATAGAC 57 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 1 5 5 108 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276867 16276947 CAAAGTTGTGCAAGTCCTG 57 NA Drosophila melanogaster 61 kat80 FBgn0040207 FBtr0074247,FBtr0074246 1 2 2 80 X 16168526 16168607 AGTGCTTTATGTCTCTGACG 57 16168465 16168485 CGGAGTAGACAAAGTTATCCT 57 NA Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 3 2 2 80 X 15810712 15810826 AGTGATTCTAAATGGACTTGGC 58 15810866 15810885 TTGGTATCCCAATCTGTCCA 58 NA Drosophila melanogaster 61 Gapdh2 FBgn0001092 FBtr0074112 2 1 2 73 X 15762245 15762263 TCACAGTCGATTCCTTGCA 59 15762371 15762392 TCCATTGATACCAATCTTCGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8578 FBgn0030699 FBtr0074104 2 1 1 83 X 15740368 15740450 CAGGGTTCTTTAGACGTTAGAC 58 15740494 15740512 TTGTTCGTGAAGCTTCTGC 59 NA Drosophila melanogaster 61 CG8239 FBgn0030683 FBtr0074087 2 1 1 164 X 15643975 15644055 GAATGAAGTTCATCGATTGGC 58 15644180 15644199 ATATCGTAGAGTCGGGACAG 58 NA Drosophila melanogaster 61 CG8097 FBgn0030660 FBtr0074047 3 1 1 80 X 15478659 15478744 TTCTAGAGGATGATGTTGACTGG 59 15478780 15478802 GATCCATTATGGACTCCATTAGC 58 NA Drosophila melanogaster 61 CG6294 FBgn0030640 FBtr0074034 3 1 1 171 X 15358297 15358315 CTACGAGGAGTTCGAGGAG 58 15358450 15359773 ATTGGTAAATCTCGCGCTG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11655 FBgn0030638 FBtr0074031 2 1 1 267 X 15348631 15349010 TTGTTCTCCTGGCAGATCG 59 15349239 15349259 ACCGGTTGTACAGATAAATGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5877 FBgn0030625 FBtr0074002 1 1 2 80 X 15188291 15188380 AAACGAATTGTTGCTAGGCG 59 15188419 15188441 CATTATTAGGTTGCTCCACAGTG 59 NA InUTR Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021 3 1 2 213 X 15165877 15166027 ATATTCAGATATCCCGAACCG 57 15165684 15165702 GTTACCGTTACCGTTTCCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 rab3-GEF FBgn0030613 FBtr0112983,FBtr0073993 2 2 2 95 X 14996217 14996238 CTCAATCTTTGGAACCAAATGC 58 14996293 14996370 AATAGGACCCTGATCCATGC 59 NA Drosophila melanogaster 61 CG10992 FBgn0030521 FBtr0073838 2 1 1 140 X 13674679 13675205 ACGGATCTAATCAGGGCTG 59 13674557 13674576 CATAATCGACGGTGTAACCG 58 NA Drosophila melanogaster 61 CG1673 FBgn0030482 FBtr0073777 3 1 1 119 X 13292934 13292955 TCTACTACCACAAGAGTTTGGG 59 13293035 13293379 TCATGCCCTCAAAGAGCTC 59 NA Drosophila melanogaster 61 Bap60 FBgn0025463 FBtr0073741 1 1 1 83 X 13052003 13052021 TTCTTCCTAAGCTTCGCCA 59 13051878 13051957 GGTCATCAGCTTCAAATCCC 59 NA Drosophila melanogaster 61 Upf1 FBgn0030354 FBtr0073596 1 1 1 177 X 11798995 11799075 TACTATAGATCTCATCGCGATCC 59 11798840 11798858 GTAATCGTACTGCGTGGGT 59 NA InUTR Drosophila melanogaster 61 Met FBgn0002723 FBtr0073521 2 1 1 109 X 11512179 11512267 TATATGAAGGATGAGGTGCG 57 11512339 11512357 TAGTCACTGTTGCAATCGT 57 NA Drosophila melanogaster 61 CG2247 FBgn0030320 FBtr0073536 3 1 1 80 X 11501982 11502058 ATGACGATGAAGGATCGTG 57 11501920 11501938 GCGCCATACACTCTTATCC 58 NA Drosophila melanogaster 61 Or10a FBgn0030298 FBtr0073548 2 1 1 81 X 11310944 11310968 CTGATCGCAATGATATTGTATCTCC 60 11310811 11310910 CTTTGGGCATAGTCATATTGAAGG 60 NA Drosophila melanogaster 61 CG15202 FBgn0030271 FBtr0073438 1 1 1 80 X 11036798 11037104 TGCATCCAGACTATCCTGG 58 11037148 11037166 TGATGGGCTTGTAGGACTG 59 NA Drosophila melanogaster 61 Vago FBgn0030262 FBtr0073427,FBtr0100644 2 2 2 150 X 10983473 10983559 ATTCCTTATCGACCCTCGG 58 10983673 10983691 TATCCTCCCAGAGTTGCAG 58 NA Drosophila melanogaster 61 Atg8a FBgn0052672 FBtr0071498 1 1 1 60 X 10659670 10659688 GTGAACAACGTCATTCCAC 57 10659559 10659646 CGTGATGTTCCTGGTACAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2124 FBgn0030217 FBtr0071491 1 1 1 130 X 10491961 10491979 TGGTCACAGTGGTTATCGT 58 10492073 10492357 CCAATAGATCACCAGTGGC 58 NA Drosophila melanogaster 61 Hk FBgn0001203 FBtr0089805 1 1 2 123 X 10135761 10136852 CTTGATTTCGGTCGTTCGA 58 10135656 10135674 CATTCGAGATACGCAACCC 58 NA Drosophila melanogaster 61 CG15308 FBgn0040941 FBtr0300073 2 1 1 272 X 10112399 10113113 ACATGAAGTTCTTCATCGCC 58 10112146 10112164 ATCCACCATAGGACTGCAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG32691 FBgn0052691 FBtr0071435 3 1 1 71 X 10058611 10058631 GCCCAAAGTGTCACATTACTG 59 10058664 10058682 ACCAGAACCAGGAGAAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 3 2 2 96 X 9857824 9857844 ATTCGATCAGGATAACGACGA 59 9857688 9857767 AAACAAGTTGCTCTCGAAGC 59 NA Drosophila melanogaster 61 CG15368 FBgn0030104 FBtr0071308 2 1 1 60 X 9110305 9110323 CGCCATGAATGCAATTTCG 58 9110346 9110365 GATTATCACGCCGGATTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12056 FBgn0030099 FBtr0071305 2 1 1 60 X 9087117 9087137 CGATGTGTTAACCCTAAAGCC 59 9087159 9087177 ATAGAAATCCCGCCATCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9034 FBgn0040931 FBtr0071343 1 1 1 80 X 9053866 9053943 TTTGTGTACCAAGATGTCCG 58 9053805 9053823 ATGTCCGGAATCTCGTTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Trf2 FBgn0026758 FBtr0300577,FBtr0112927 3 2 2 81 X 8318277 8318297 ACGAAGAAGTTGAGAAGAACG 58 8318337 8318418 CTTAAGCGATCACTAGAATTGC 57 NA Drosophila melanogaster 61 CG11190 FBgn0030035 FBtr0071175 3 1 1 96 X 8300893 8300911 TAGTGGTTCGTCCATTGTC 57 8300607 8300835 TGGGTGTGGTAAAGATTATCC 57 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089977 2 1 7 96 X 8130599 8130618 TGGTCATCGGTAGGATTGTG 59 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 2 6 7 100 X 8131884 8131902 GACTACCACTTCATCACGC 58 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 CG2120 FBgn0030005 FBtr0300914 2 1 1 60 X 8030078 8030099 TCTATTGGAACTTGTGAATGGG 58 8030188 8030206 TGTTGGCTTATGTTCCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15333 FBgn0029989 FBtr0071124 2 1 1 60 X 7914009 7914030 GGAATGAAATGTGTACAGTGGG 59 7913970 7913990 GCCTCAGTTGAGCATTTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hdm FBgn0029977 FBtr0071133 2 1 1 82 X 7813089 7813107 CAGTGCTGTATGGGATGGT 59 7812922 7813043 TTGTTGACAGGCAATGCAC 59 NA Drosophila melanogaster 61 Ir7a FBgn0029961 FBtr0071075 1 1 1 60 X 7660556 7660575 GGAGCACATCTTTCTCTACC 57 7660598 7660616 GAACTTTAGCAGCGAATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NELF-B FBgn0027553 FBtr0071077 1 1 1 98 X 7622247 7622265 GTGAATATTCCGGGTCAGG 57 7622089 7622187 CAATACACCATTCTCAAGCTG 57 NA Drosophila melanogaster 61 CG34337 FBgn0085366 FBtr0112539 1 1 1 83 X 7311396 7311417 CCAAATTTGGTGAAATGGAACG 59 7311460 7311549 GTCTAAAGCCGGTAGTAGCT 59 NA Drosophila melanogaster 61 CG15034 FBgn0029946 FBtr0071064 2 1 1 65 X 7241064 7241083 ACGACCTTCAATTCAAGCTG 58 7241018 7241039 GTTTCTTCAGAAGACGAATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091673 1 1 3 243 X 6770163 6770184 ACATTTCCCAGTGTCTTTAGTC 58 6770388 6770603 GTTGTTGCTGCATTGACTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299793,FBtr0299795,FBtr0299794,FBtr0300526,FBtr0299791 2 6 6 80 X 6677561 6677656 GTCAACGATCTAACGTCGA 57 6677499 6677519 AGAGCAAACCAACTGATAGAC 58 NA Drosophila melanogaster 61 CG14441 FBgn0029895 FBtr0070959 1 1 1 80 X 6603858 6603876 AACCTGCCAATGATACCCA 59 6603918 6606320 TTTGCTAATCTTGACGTTGGC 59 NA Drosophila melanogaster 61 CG33665 FBgn0053665 FBtr0302414 3 1 1 125 X 6372744 6372821 TTGACTACTCCGAAGCGAG 59 6372637 6372656 TCTCTTGTCTGATATCGCGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070906 1 1 2 60 X 6244962 6244980 ACATGCCTGATATGCAGGA 58 6252951 6252969 ATCATGCGAACATAGGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG5966 FBgn0029831 FBtr0070866 3 1 1 94 X 5885411 5885531 CTTTCGAGAGCTTTAAGGACAC 59 5885586 5885604 CTGGTAATCCTCCTGGCTG 59 NA Drosophila melanogaster 61 CG12729 FBgn0029816 FBtr0070819 3 1 1 60 X 5739977 5739995 GGACCGGCCTTTAATAGGA 58 5740017 5740037 AAGTGCCAGAATTTCGTACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070842 1 1 2 164 X 5638436 5638454 AAGGAGAGGGAGAAAGTGC 59 5637847 5637867 ACCAGGAAGAGTATGATTGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15773 FBgn0029795 FBtr0070806 2 1 1 173 X 5627734 5627951 TTCCTGCGAGCAAGATACC 59 5628088 5628106 CAACGGTAACAGCTACGGA 59 NA Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 3 2 2 84 X 5549754 5549772 CTATTGGTCGTCATGGGCA 59 5549630 5549712 AATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 CG15784 FBgn0029766 FBtr0070777 2 1 1 60 X 5325406 5325424 TTTGGACCACACTTTGGAC 58 5325448 5325466 AGGATCTCCGATCGAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cdk7 FBgn0015617 FBtr0070756 2 1 1 91 X 5202922 5202940 AGGCTCCTAAACGATGCTG 59 5202778 5202867 AAACTGTGGCAAACTGACC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 torp4a FBgn0025615 FBtr0070690 1 1 1 60 X 4543646 4543664 TACATATTGCCGGTTTGCC 58 4543546 4543622 TTCATCTATTCTCGCCGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 2 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016107 TCTAGCTGTCGAGTAGTCG 58 NA Drosophila melanogaster 61 CG6428 FBgn0029689 FBtr0070625 2 1 1 81 X 3861484 3861502 GGAATATACACCGCTGCTG 58 3861362 3861441 GTACGATTGCTGAATATCGCT 58 NA Drosophila melanogaster 61 CG32783 FBgn0052783 FBtr0070615 1 1 1 80 X 3839397 3839470 TACTGGAGTGGAAACGATGAG 59 3839509 3839530 TATGATTAGATCGTGCTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 3 2 2 90 X 2491033 2491362 TTATGTGGTCACCCAGGTG 59 2491416 2491434 CATCGCGAAGAAGCAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 hfw FBgn0001189 FBtr0070270 3 1 1 81 X 1566317 1566401 ATTCGCTGAGCAAGATTCC 58 1566446 1566464 CCTGCCAGGTAAATACGAC 58 NA Drosophila melanogaster 61 dor FBgn0000482 FBtr0070269 2 1 1 82 X 1561636 1561717 CTTCGCATAGCTTATCACGAC 59 1561761 1561779 CGTAAGAGATCGCACTCCT 59 NA Drosophila melanogaster 61 CG14773 FBgn0040895 FBtr0070227 1 1 1 61 X 1322132 1322150 TTTGTCCAAGTGCAACAGC 59 1322175 1322193 TGATGGCGATGAGGATGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12773 FBgn0024365 FBtr0070235 1 1 1 123 X 1246409 1246427 TCTTCTTTCCCACCGTCAC 59 1246247 1246322 AAGTACAGGAACGTGGAGG 59 NA Drosophila melanogaster 61 CG14627 FBgn0040361 FBtr0070199 1 1 1 60 X 1076554 1076572 ATCCGGAAACTCGGTTCAG 59 1076596 1076614 AATGGGCACTATGATCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12470 FBgn0040371 FBtr0070069 1 1 1 160 X 201915 202131 TTAGCTAGTTGACGTCAGGA 58 202254 202272 TTGCCCTTCTTTCCTTTGC 59 NA InUTR Drosophila melanogaster 61 CR40574 FBgn0085749 FBtr0114199 2 1 1 273 U 9836254 9836276 GGATATAGGTAGTGTAAGCTAGC 57 9836509 9836527 TGTCGTAAAGCAGCTAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40629 FBgn0085505 FBtr0302349 2 1 1 60 U 2573065 2573083 ACCGTCAACAAGTTCTCCT 58 2573105 2573125 GAAATCCTTGAAGCGATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100342,FBtr0089328,FBtr0100343,FBtr0301563,FBtr0089327,FBtr0100345 1 8 8 80 4 1127211 1128333 ATTGAAGCACATGATGAGAACC 59 1128373 1128392 GTACGTTGACATACGTTGCC 59 NA Drosophila melanogaster 61 Slip1 FBgn0024728 FBtr0089090 2 1 1 80 4 689131 689152 TTCCTATAGTCATTGTCCACAG 57 689193 689766 CTGTTTGCAACCTCTTGAC 57 NA Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 3 8 8 80 4 671647 672941 TAACAGCACAGATTGATGGTC 58 671587 671606 TCAAATACGGGTGAAAGCTG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3405d FBgn0082957 FBtr0113592 3 1 1 102 3R 24428292 24428310 TCCGCATAGCAATGTTCGA 59 24428376 24428394 CATTGGTGCACAAACACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2150 FBgn0003065 FBtr0085859 3 1 1 63 3R 27590058 27590377 TCTCAGTGTTCTTAGTGTTCG 57 27590015 27590033 TTATATCCGGATGGTGGCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG18672 FBgn0040628 FBtr0085762 3 1 1 83 3R 27086484 27086713 ACGGTAAGCATTAGCTTGGA 59 27086759 27086777 GTAACGACCCTTCAAACGG 58 NA Drosophila melanogaster 61 CG1542 FBgn0039828 FBtr0085757 1 1 1 115 3R 27039312 27039330 GGGATAACTCAGATGCCGA 59 27039471 27039547 CAGCAGTTTGGTCACATCG 59 NA Drosophila melanogaster 61 CG15546 FBgn0039807 FBtr0085718 1 1 1 60 3R 26701180 26701201 AAAGGATACTGAAGCAAACGTC 59 26701141 26701159 ACTCGACTTTCCAGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zfh1 FBgn0004606 FBtr0085701 1 1 2 211 3R 26599451 26599719 AGTATCAGTCCCTCAGCGA 59 26599894 26599912 GTTGTTCATGGACTGGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31021 FBgn0051021 FBtr0300983 2 1 1 80 3R 26429227 26429247 CTTCTACATAGTCGAGTACGC 57 26429289 26429367 AGCTTTGGGAACTTTGTGG 58 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089425,FBtr0089422,FBtr0089424 3 3 4 63 3R 26034370 26034648 GTCGACAAAGATGGCTATCG 58 26034326 26034344 GAAGTCATCGGGATCCGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085547,FBtr0085549 1 3 3 60 3R 25824843 25824863 CGAATCATTAAGATCCAGCGG 59 25824882 25824903 CCTCAAAGTAGCTATCCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fig FBgn0039694 FBtr0085538 2 1 1 60 3R 25605198 25605219 GGCAACACAATGTTTCATACTC 58 25605159 25605178 GACAGGATTAGGGTGATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kul FBgn0039688 FBtr0085460 3 1 1 72 3R 25555260 25555340 AACTTTGGATCACCACACG 58 25555373 25555394 GGGCAAACATAATGAAGTTACC 58 NA DesignRelaxed Drosophila melanogaster 61 Gycalpha99B FBgn0013972 FBtr0085453 3 1 1 83 3R 25509286 25509304 AACGAGGATCTCAACACGG 59 25509350 25509429 ATCCAGTTTGAGCTTGTGGA 59 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 1 3 3 86 3R 24975221 24975304 TTTAGACAACCTTTCTGAGGAC 58 24975351 24975369 TTGAAGTTCTCGTCCAGCT 59 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516,FBtr0085359 1 2 2 91 3R 24867136 24867328 AGAGTCACTTCGATCGAGC 59 24867383 24867401 GTTGCTCACATTGGTCACG 59 NA Drosophila melanogaster 61 CG9997 FBgn0039597 FBtr0085314 2 1 1 60 3R 24582414 24582435 TCCGAATAATGACACAGTACAG 58 24582375 24582395 ATTGGTCAAGGTAACTACAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17856 FBgn0039576 FBtr0085279 1 1 1 60 3R 24119912 24119930 GGCCTACAACATGTCTGGA 59 24119954 24119972 CTCGTACAGACAGTCATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42487 FBgn0259990 FBtr0300439 2 1 1 60 3R 23784738 23784814 TTACAAACAGCACAGCCCT 59 23784696 23784714 AAGGATCTGACGGAACTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS10a FBgn0027494 FBtr0085194 3 1 1 61 3R 23478961 23478979 GAATGGACAAGAAAGGCGA 58 23479004 23479022 GAAACCGCCACGATATTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5484 FBgn0039450 FBtr0085037,FBtr0085039,FBtr0085038 3 3 3 82 3R 22544515 22544533 AGTACTACTTCGCAGTGGA 57 22544575 22544652 GGACCAATCCTTATGCATATAGG 58 NA Drosophila melanogaster 61 TwdlR FBgn0051081 FBtr0085033 1 1 1 75 3R 22460651 22460724 GTTTCTTACGTTGTTGGCC 57 22460763 22460781 CACAGGTCCTCCATAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 dei FBgn0008649 FBtr0085009 3 1 1 192 3R 22267458 22273281 GATGAAGTCCAATACGTACGA 57 22273434 22273453 TAGTTGAAAGTCAGCCAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14550 FBgn0039405 FBtr0084974 1 1 1 60 3R 21883795 21883879 GAATCCATAATAAGAGTGCCGT 58 21883756 21883774 GGACTTTGTAGGCGATCTC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177,FBtr0084922 1 2 2 60 3R 21601182 21601201 AGCTTATTATGGGTCAGCGA 59 21601141 21601159 AAAGGACTTCTCAGCGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33494 FBgn0053494 FBtr0089607 1 1 1 115 3R 21320010 21320028 CTTATGGTCGACAGCAAGC 59 21319777 21319798 GATTGTCTGAGTTTCTTATCGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG31436 FBgn0051436 FBtr0084830 3 1 1 83 3R 21130996 21131015 AAGATCGGCTATAAAGGCGT 59 21131056 21131140 GAGAAAGAACTCGTAGTACTTGTG 59 NA Drosophila melanogaster 61 CG11893 FBgn0039316 FBtr0084827 3 1 1 96 3R 21116672 21116691 AATGATGGTCTGTGGAAGCA 59 21116813 21116831 TATTCGCTTTAACGGCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10425 FBgn0039304 FBtr0084867 3 1 1 146 3R 21087198 21087280 TTAAGGATGCCCTGAAGGG 59 21087070 21087089 TAACTATTCGCAGTGGTCCC 59 NA Drosophila melanogaster 61 CG42503 FBgn0260229 FBtr0300637 1 1 1 80 3R 20951605 20951626 TCAGTAGAATCAAACGAGTGGA 59 20951487 20951565 CACGTTTGGTGAAGTGTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG11920 FBgn0039274 FBtr0084769 1 1 1 60 3R 20900826 20900844 GCTGAAATACGCGGATGAG 59 20901357 20901380 GGCATAGTGATACTCATCATTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 ssh FBgn0029157 FBtr0084800,FBtr0084799 3 2 2 169 3R 20767855 20767939 TGCCATACGAAACAAACCC 58 20767704 20767724 CGATAAACGACTTGTACTCGC 59 NA Drosophila melanogaster 61 Ast FBgn0015591 FBtr0084744 2 1 1 101 3R 20590647 20590667 TGCTCAATTCCAAATCGATCC 59 20587544 20590584 CTACTGCTGAGCGAATTCC 58 NA InUTR Drosophila melanogaster 61 asp FBgn0000140 FBtr0084692 3 1 1 92 3R 20585536 20585554 GTGCGACAAAGACAGTGAG 59 20585608 20585692 TAGTCGTGAATGATCTTTCGC 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100623,FBtr0100629,FBtr0100624,FBtr0301582,FBtr0100633,FBtr0084683,FBtr0100638,FBtr0100635,FBtr0084685,FBtr0084684,FBtr0100627,FBtr0100631,FBtr0100636,FBtr0301581,FBtr0100634,FBtr0100622,FBtr0100637 2 18 18 80 3R 20501030 20501365 TTATACATCTGCTGGAGAACTC 57 20501404 20501424 AATAGACACAGGTCCAATACG 57 NA Drosophila melanogaster 61 HDC15381 FBgn0086610 FBtr0113461 2 1 1 126 3R 20202747 20202817 CAAACAAGATTGTCGCTGG 57 20202905 20202925 AAACTCCACCAGTAAATTGGG 58 NA Drosophila melanogaster 61 CG18528 FBgn0039189 FBtr0084628 2 1 1 136 3R 20185278 20185614 GAATACGAGCCAAAGGCTC 58 20185160 20185178 TGAAACTCGCAGGAATCCT 59 NA Drosophila melanogaster 61 CG6204 FBgn0039165 FBtr0084555 3 1 1 80 3R 20020757 20020836 AGGAGGATTGCCTAAGTGTG 59 20020878 20020897 CCTGGAACATGATCAGTGGT 59 NA Drosophila melanogaster 61 CG10694 FBgn0039147 FBtr0084542 3 1 1 60 3R 19933253 19933273 AGAAATTGGGCAATTTACCCG 59 19933291 19933313 CTGTATATCAGCTGAAGGTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084537,FBtr0084536,FBtr0084538 2 3 3 60 3R 19878871 19878889 GGACTGGATTCAATGTCGG 58 19878912 19878931 AAGACCAGTTCATCGTACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0084521 2 1 2 180 3R 19754127 19754260 CAGGTTGAATAGGGAAACCT 57 19753966 19753984 CTTGCTAATCCGTTTCACG 57 NA InUTR Drosophila melanogaster 61 CG5857 FBgn0039125 FBtr0084491 3 1 1 147 3R 19750651 19750730 ACACAGACTATCAACACCTG 57 19750837 19750858 GGAAATTCAATGGAGATCTCCT 58 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 2 3 3 86 3R 19691337 19691355 ATACTGGCTGAAGACGGTG 59 19688921 19691289 CAAGTAACCATTGTAGCCGAG 59 NA Drosophila melanogaster 61 CG10183 FBgn0039093 FBtr0273191 3 1 1 94 3R 19422602 19422620 ATTCCGTCTTCATTTGGCA 57 19422469 19422545 GTTGAGCATCACAGTGTAGG 58 NA Drosophila melanogaster 61 CG4434 FBgn0039071 FBtr0084382 2 1 1 82 3R 19114373 19114394 CTACATCCGAGCTTATTATCGA 57 19114251 19114333 TATGTTCGGTAGTTGACTATCG 57 NA Drosophila melanogaster 61 CG34111 FBgn0083947 FBtr0110800 1 1 1 93 3R 19070446 19070464 CAAATGTTCCCGAGTGCTC 59 19068251 19070389 TACTTTGTGGAGTGCTCCC 59 NA Drosophila melanogaster 61 CG4907 FBgn0039010 FBtr0084330 3 1 1 151 3R 18535615 18535692 TATGGGATAAGTCTGCACGG 59 18535483 18535501 TCCAGCTGGTATAATGGCA 58 NA Drosophila melanogaster 61 CG13842 FBgn0039009 FBtr0084331 2 1 1 80 3R 18531225 18531313 GCCCTAAGAATGAATTTGGTACTC 59 18531168 18531187 ATTGGTTGCTCAGATTGACG 59 NA Drosophila melanogaster 61 CG5326 FBgn0038983 FBtr0084285 1 1 1 104 3R 18358617 18358698 TGCAGATTGTCCAATTCCTG 58 18358532 18358550 CATTGAAGGTCAGGAGTGC 58 NA Drosophila melanogaster 61 CG31233 FBgn0051233 FBtr0084127 1 1 1 107 3R 17577292 17577310 GTTTCGTATGCTAAGGCCG 59 17577379 17577459 AGTGAATTGATTGTCGACCAG 58 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258,FBtr0084014 3 2 3 183 3R 16956102 16956199 TAGACACAAGTTCCTCCCG 58 16956346 16956364 ACTTAAAGAGATCGCCCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TotB FBgn0038838 FBtr0083973 3 1 1 95 3R 16699714 16699792 GTCTTTGATCTGTTTCGCAC 57 16699850 16699868 ATTTCAGCAACCCTACGAC 57 NA Drosophila melanogaster 61 Fancd2 FBgn0038827 FBtr0083995 1 1 1 80 3R 16640971 16640990 TTGGACATCATAGCCAATGC 58 16640805 16640931 ATAGTTGATGTTAAGCAGCTCG 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 2 5 5 83 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396868 16396886 GTTGTCTATCTCCCGAGCC 59 NA Drosophila melanogaster 61 CG15922 FBgn0040575 FBtr0083951 3 1 1 218 3R 16385756 16385774 TAAAGATGAGCAAGCAGCC 58 16385495 16385513 AGAGGGTTTGTCATTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17190 FBgn0038761 FBtr0083845 1 1 1 60 3R 15837891 15837910 CTGATAAACACAGTTGGCGG 59 15837850 15837872 GATGAGTATTGCTCTTCACATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 2 2 2 140 3R 15137649 15137669 ATCTCAACTACTACGGATCCG 58 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 CG42358 FBgn0259704 FBtr0299957 1 1 1 151 3R 14986379 14986460 CCTTGAACCTAACACCCGA 59 14986246 14986266 CTTAATTTGCAAACCCTGCAG 58 NA Drosophila melanogaster 61 CG14298 FBgn0038654 FBtr0083695 2 1 1 151 3R 14701520 14701538 TCAATCTGACGTTCCTCCG 59 14701651 14702473 GCAGTTGAAATTGTTCAGCTC 58 NA Drosophila melanogaster 61 CG14299 FBgn0038651 FBtr0273382 2 1 1 80 3R 14577344 14577364 GAAGCACTCAATCTGATGCTG 59 14577226 14577305 AGCCTTAATGTGTATGTTGGAC 58 NA Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 1 2 2 91 3R 14509016 14509034 TCTGTCCTATGTTGCAGCC 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 2 1 1 63 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192723 14192807 TAAACACGCTGAGATGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307,FBtr0083586 3 2 2 109 3R 14190477 14190554 TCGATGTCTATATTGGTCAGGT 58 14190389 14190407 TTTAAAGGCAGCATCTCCG 58 NA Drosophila melanogaster 61 CG31235 FBgn0051235 FBtr0083588 2 1 1 104 3R 14143412 14143431 TGGCTGTTCATGAAGAATGC 59 14143195 14143348 TTCGCAATCATTGAAGTACTCG 59 NA Drosophila melanogaster 61 CG8064 FBgn0038597 FBtr0083574 2 1 1 159 3R 14109600 14109682 GTGTGGGATTTGCGAATGG 59 14109804 14109823 GATCGTAGTACCTGTCCGAG 59 NA Drosophila melanogaster 61 CG7985 FBgn0028499 FBtr0083559 1 1 1 112 3R 14026152 14038138 CGGCTTTAACAATGCACTC 57 14038214 14038232 TAGTATGGCCCATGTCCAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 htl FBgn0010389 FBtr0083548 1 1 3 80 3R 13874284 13878233 ACTTTGTGAGGTGTTGCAG 58 13874222 13874242 TTCCATAGATCATTCGATGGC 58 NA InUTR Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 3 1 7 112 3R 13835713 13835731 TCATCCGCTAGCCTATTCG 59 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 2 1 7 168 3R 13834719 13835675 CCACTCACTGGACATTTGG 58 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 1 4 4 80 3R 13519321 13519448 CCACCAGATCAAAGTCCAC 58 13519259 13519277 CCTAGCATTGTAGCCTGGA 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443,FBtr0113398 2 4 4 80 3R 13316121 13317465 CCATTTCCCATATTTACCTGGT 58 13316062 13316080 AAGTATCACTCGCTGTGAC 57 NA Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 1 2 2 139 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264946 13265027 TCCAACACAATTATGTCGCC 59 NA Drosophila melanogaster 61 CG5285 FBgn0038490 FBtr0083409 2 1 1 97 3R 12976602 12976624 CGACTATTTACGTCGCTATATGG 59 12976680 12976760 CAAAGGGAATTCCGGTTTGG 59 NA Drosophila melanogaster 61 CG31269 FBgn0051269 FBtr0113401 2 1 1 76 3R 12953521 12953539 CAATGGTTACCTGGTGGGA 59 12953718 12953736 AAACACTGGCATGAACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 3 2 2 60 3R 12576905 12576924 TATTGGGTATGTGGTGTCCG 59 12576864 12576884 GTTATCGAAGGATGTTTCGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 1 2 2 60 3R 12398521 12398542 TCAGAACTTTACAACGCTACAC 59 12398561 12398581 CAGAAACTCCAAGGTAGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0301716 2 1 2 94 3R 11789256 11789332 CACTATCAATCGCCATGGAC 58 11789181 11789200 CTTGGTTAGTGCTTGCATGG 59 NA InUTR Drosophila melanogaster 61 c(3)G FBgn0000246 FBtr0083196,FBtr0083195,FBtr0083194 1 3 3 90 3R 11616600 11616685 CCTACGAGATTGTTGTTCAAGAG 59 11616532 11616551 TGTAGCTTCTCACTGTTGCT 59 NA Drosophila melanogaster 61 CG18522 FBgn0038347 FBtr0083154 2 1 1 81 3R 11361060 11361079 GGAGGGAAAGATTATCCGTG 57 11360776 11361018 GGGCATAATCTTGTAGGAGTC 58 NA Drosophila melanogaster 61 CG14870 FBgn0038342 FBtr0083145 2 1 1 84 3R 11308095 11308114 AAGAGCACCAGTCCATATGG 59 11308279 11308297 AACCGAGTAGTGTCTCCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Sra-1 FBgn0038320 FBtr0083085 2 1 1 82 3R 11162678 11162696 AAAGCGTCTTGAAGCACAG 59 11162740 11162813 CTATCATTGCTTGCTTTGCAG 58 NA Drosophila melanogaster 61 l(3)neo43 FBgn0011476 FBtr0301089 1 1 1 100 3R 11104152 11104232 AACCTCAGGTATCAGTACGC 59 11104071 11104089 GACTCCAACGTCACATCCT 59 NA Drosophila melanogaster 61 CG3505 FBgn0038250 FBtr0082966 1 1 1 93 3R 10483465 10483483 TGCTATCCGGCAATCTCAG 59 10483539 10483995 CTAGGACAGCATACCTGGAC 59 NA Drosophila melanogaster 61 Cyp313a1 FBgn0038236 FBtr0082954 3 1 1 99 3R 10347635 10347728 GCTTCGAATCGCTCATATCTC 59 10347786 10347807 GCTCGTAACTTATCATAACCGC 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 2 3 3 86 3R 10126664 10126683 AAATGCATGAACGACTTCCT 58 10126732 10126959 GCTGACCAGGTCCTTAGAG 59 NA Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 2 1 1 77 3R 9089615 9089693 AAACTAGATGCCCTACGCT 58 9089556 9089574 CTTTGTCTTGGGTCGAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 pic FBgn0260962 FBtr0082709 3 1 1 81 3R 8881939 8881960 GATGGAGATCTAATTGAGAGCT 57 8882002 8882082 TCAGTGTCAACTCCAATCC 57 NA Drosophila melanogaster 61 beat-Vc FBgn0038084 FBtr0082658 3 1 1 60 3R 8578166 8578185 CCAGAGTTCAAGCTGATCGA 59 8573271 8578143 CGAATTTGGGCAACACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0113226,FBtr0113228 2 3 6 275 3R 8520870 8520888 AAATCGCTTGGTTGTGTCG 59 8521126 8521861 GCATCCATTGCCTTCATCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cyp313a2 FBgn0038006 FBtr0082618 1 1 1 80 3R 8062022 8062041 CTCCTTTGTTGGTCAAGGTG 59 8061906 8061982 AATGTGGTTTGAGTAGCTATGG 58 NA Drosophila melanogaster 61 CG4810 FBgn0037994 FBtr0082546 2 1 1 86 3R 8019736 8019755 AGGAGGGTTCCATCAATTCG 59 8019592 8019687 CAATGCGAAGAACCTGCTG 59 NA Drosophila melanogaster 61 CG3532 FBgn0037979 FBtr0113224 3 1 1 124 3R 7839866 7839886 CTAAACTGACCCAAATGAACG 57 7839969 7840053 CGTAAGGAACTTTAAGAAGACG 57 NA Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 3 1 1 192 3R 7718482 7718553 TTGACGAGATCATTCGCCA 59 7718308 7718326 AGAGTCTTGACCCGATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041,FBtr0301042 2 2 2 81 3R 7717073 7717157 TCTACCAGAATCTTGCTGAGG 59 7717200 7717218 ATCTTAGCTGCAGGGTAGC 59 NA Drosophila melanogaster 61 Ho FBgn0037933 FBtr0082424 3 1 1 98 3R 7506224 7506242 AGACAAAGACGACTTGGAG 57 7506302 7506377 AAGACAGAGATCTTCTCAGGA 57 NA Drosophila melanogaster 61 CG6813 FBgn0037923 FBtr0300580,FBtr0300581 3 2 2 132 3R 7452297 7452315 AGTCGAGATGCGAATTCTG 57 7452123 7452201 TTTCTTGCAGCTTAGCTCC 58 NA InUTR Drosophila melanogaster 61 CG6808 FBgn0037921 FBtr0082451 1 1 1 81 3R 7447782 7447802 ACCTTACCAATGTTGCTACTG 58 7447651 7447739 TTCATTCGTGTGCAAACGT 59 NA Drosophila melanogaster 61 CG14708 FBgn0037910 FBtr0082409 3 1 1 60 3R 7380022 7380042 AATATCGACAAGTTGACCGAC 58 7380064 7380082 TCAGGGAGCTCCTATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5214 FBgn0037891 FBtr0082358 2 1 1 90 3R 7071375 7071473 GATATGAGCTATGCCATGGAC 58 7071524 7071543 CGAAGATCGACATGAATCCA 57 NA Drosophila melanogaster 61 Mcm5 FBgn0017577 FBtr0082279 2 1 1 82 3R 6615630 6615648 TAGCAGTCTACACTTCGGG 58 6615694 6615770 AAAGTTACGCGTTTGAGGA 57 NA Drosophila melanogaster 61 Irp-1B FBgn0024957 FBtr0082259 2 1 1 81 3R 6236385 6236403 TATCTGAAGGCAACTCAGC 57 6236263 6236342 GATCCAAGGTGATACTCTGAG 57 NA Drosophila melanogaster 61 CG8199 FBgn0037709 FBtr0082067 3 1 1 80 3R 5381655 5381735 ACCTGAAAGTGATTGAAGGAG 58 5381776 5381795 GGAAATTGGCGTAATCTTCC 57 NA Drosophila melanogaster 61 CG16779 FBgn0037698 FBtr0082125 1 1 1 90 3R 5298877 5299018 CAAGATCACTTAAACGGACAC 57 5298807 5298825 CATCGCAATACGATTTGCC 57 NA Drosophila melanogaster 61 CG11982 FBgn0037653 FBtr0081965 1 1 1 60 3R 4832687 4832705 CTCATCGAGCGGATCTCAG 59 4832728 4832747 TAGCAGCGACACAATATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9731 FBgn0037640 FBtr0081929 3 1 1 60 3R 4688240 4688258 CTCGAGTTGCACGAATTCC 59 4688198 4688216 GTGCACTAACCAACTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL19 FBgn0037608 FBtr0081901 1 1 1 118 3R 4499964 4500034 AGCGGATTGTGACCTTCTC 59 4500114 4500134 AATGATTGTCTTCCGGTTCAC 59 NA Drosophila melanogaster 61 Gie FBgn0037551 FBtr0081794 1 1 1 80 3R 3953910 3953994 GCGATTGTCTACATGGTGG 58 3954038 3954056 TTTGTCCAACAGTGAGTGC 58 NA Drosophila melanogaster 61 Pbp95 FBgn0037540 FBtr0081786 3 1 1 91 3R 3840613 3840632 GAATACTTCCCGGACAAGTC 58 3840686 3840764 TTGGTAGTGAAGGGTTCGT 58 NA Drosophila melanogaster 61 CG10435 FBgn0037539 FBtr0081820 3 1 1 84 3R 3837067 3837088 ATCAGTACTATGGGTTTCCCTC 59 3836944 3837028 GGTGTTCGATAATCTTCTTATCGTC 59 NA Drosophila melanogaster 61 CG2616 FBgn0037512 FBtr0081738 1 1 1 83 3R 3548933 3549432 ACCTTGAAATCAGGGATACCA 58 3549477 3549495 TAACAGCACAAATCCGAGC 58 NA Drosophila melanogaster 61 CG1287 FBgn0037506 FBtr0081554 1 1 1 60 3R 3327571 3327589 AACCGAGTATCTACGACCA 57 3327529 3327548 GCATGAATACGATCCCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MstProx FBgn0015770 FBtr0081585 1 1 1 93 3R 3194381 3194399 TTACCAATTGCACGGTTCG 59 3194201 3194219 AAATCCACCTCGTTGTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Osi17 FBgn0037427 FBtr0078610 1 1 1 140 3R 2144131 2146257 CATCATCACACGGTTGTTCC 59 2146360 2146378 GAATCCGGGTCCATAGCTC 59 NA Drosophila melanogaster 61 CG1218 FBgn0037377 FBtr0078630 3 1 1 60 3R 1618323 1618343 ATCCACCAGAATTTCAGACGA 59 1618364 1618383 CAGTAACCGTAGTGAATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1218 FBgn0037377 FBtr0078630 2 1 1 60 3R 1618324 1618343 TCCACCAGAATTTCAGACGA 59 1618365 1618384 CCAGTAACCGTAGTGAATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mia FBgn0014342 FBtr0089313,FBtr0300009 3 2 2 86 3R 1375372 1375391 TACTCCGGAAACATAATGGC 57 1374901 1375326 GTTGTAAACACCAATGACTCTG 58 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687,FBtr0078686 1 2 2 80 3R 1362362 1362443 TGCCCAAATAGAGATTGTTCG 58 1362483 1362503 GTCAGGTATTCACAGATCTCG 58 NA Drosophila melanogaster 61 Snr1 FBgn0011715 FBtr0078682 2 1 1 93 3R 1297021 1297039 GTGGATGATATCATGGCCG 58 1297590 1297608 TCTTTGACTTGCTCTCCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31542 FBgn0051542 FBtr0302421 1 1 2 226 3R 1196128 1196208 CAATGTGACCGCTAATGGG 59 1196398 1196416 TAAACTACGGCTTATCGGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0078837 3 1 2 109 3R 733741 733759 AAGACTCTGGATGTGGTCG 59 733832 733978 TTCATCAGCTTGGTCACGT 59 NA Nonspecific Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 3 3 3 96 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526042 526890 GCATGGTCGCTCATAACAC 59 NA Drosophila melanogaster 61 CG12001 FBgn0037265 FBtr0078861 3 1 1 86 3R 482300 482323 GGAGTACTCCGTATATCATTTCCA 59 482367 482633 CCACCTCAACTGAAGTTTGG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078940,FBtr0078939 3 2 4 272 3R 278929 278947 CTGCCGAGTACTACCACTG 59 273438 273458 TGTATCTGCTTATGCTGTCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946,FBtr0301244 3 2 2 83 3R 251601 251619 CAATGTAAAGGCCGATCCC 58 251470 251555 AGTTGTTCCGGCTTATTCTC 58 NA Drosophila melanogaster 61 CG32944 FBgn0052944 FBtr0290249,FBtr0290250 1 2 2 80 3R 240297 240315 GTGGAACTGCTATCGTCGT 59 239209 240258 CATAAACAAATCCTCCTCATCCTG 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 1 2 2 80 3R 231256 231328 AGACGTACAACTAAGTCTGAG 57 231370 231388 AGCCTCTGGTAACTTACGA 57 NA Drosophila melanogaster 61 CG14646 FBgn0037241 FBtr0302339,FBtr0078919 1 2 2 87 3R 216766 216836 CTTAGCGTAGCTAAGGCAG 57 216887 216905 TTGGCCGTACAATAATGCT 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0301772,FBtr0300789,FBtr0301768 1 3 21 165 3R 110120 113803 CCGTTAAAGATGCTGCAGG 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-3327b FBgn0082966 FBtr0113612 1 1 1 79 3L 13036083 13036104 GTCTATTGGTTCAAATCGAAGC 58 13036144 13036162 TTACTCAGACGACTGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11449 FBgn0037162 FBtr0078503 3 1 1 61 3L 22447615 22447633 CATCTTTCGGGTCCTTCAG 57 22447658 22447676 TTGCTTCTGGTCATAGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 S1P FBgn0037105 FBtr0078466 1 1 1 81 3L 21609583 21609601 CTTCCAGGGAATGCCTAGG 59 21609462 21609541 GTGTAAGAAACTTGGGAGTTCG 59 NA Drosophila melanogaster 61 CG5262 FBgn0036988 FBtr0078230 2 1 1 101 3L 20422687 20422708 CGTAATGTTCTATCTCTGCCTG 58 20422481 20422625 GTTTGGTCACATACGACGT 58 NA Drosophila melanogaster 61 Snap FBgn0250791 FBtr0074840 2 1 1 103 3L 20308394 20308506 GCTCATCAAGGTGTTGTGC 59 20308573 20308591 TGTACCACTGATCCAACCG 59 NA Drosophila melanogaster 61 CG18294 FBgn0036873 FBtr0074984 2 1 1 94 3L 19468553 19468626 TAATGTTCAAATCCGCCGT 57 19468477 19468495 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 fal FBgn0028380 FBtr0074995,FBtr0290284 3 2 2 80 3L 19290536 19290626 CCATGAATTTGATCACGAGGA 58 19290666 19290686 GAGACTAGCTCCTGATTGAGG 59 NA Drosophila melanogaster 61 CG14073 FBgn0036814 FBtr0075084,FBtr0075085 2 2 2 80 3L 18796089 18796172 GCTTAACAAGCTCTGTCCG 58 18796027 18796047 TCATCTATCTTGAACTCCCGT 58 NA Drosophila melanogaster 61 Nufip FBgn0036812 FBtr0075088 1 1 1 124 3L 18741147 18741225 CAAGAACAAAGCAGCCCAG 59 18741041 18741062 AGGTGGAGTTTCATATCCTGAG 59 NA Drosophila melanogaster 61 term FBgn0003683 FBtr0075112 1 1 1 156 3L 18586659 18586677 TTACCAACGAGGAGACCAC 59 18586521 18586539 GTAAGATGCAAGCCCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7271 FBgn0036791 FBtr0075101 1 1 1 68 3L 18581990 18582008 TTACCGACGAAGAGACCAC 59 18582040 18582058 CACATTCGTGTAACTGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4306 FBgn0036787 FBtr0075117 3 1 1 88 3L 18455629 18455827 TATAGACAGTCAAGAAGGCGT 58 18455561 18455581 CAGGAGTTGATTCAGATTCCC 58 NA Drosophila melanogaster 61 rpr FBgn0011706 FBtr0075120 2 1 1 61 3L 18391231 18391249 GTCACAGTGGAGATTCCTG 57 18391188 18391206 GACATGAAGTGTACTGGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5290 FBgn0036772 FBtr0075152 1 1 1 80 3L 17905289 17905358 GACAGTTGAAGATCTGCCC 58 17905227 17905247 CGGAGTTCATCTATTGTCCAC 58 NA Drosophila melanogaster 61 NUCB1 FBgn0052190 FBtr0075171 1 1 1 89 3L 17795021 17795039 CCTGAGTTCCGTAAGAAGC 58 17792611 17792629 ATGGTGGTTCACGTAGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7542 FBgn0036738 FBtr0075181 2 1 1 60 3L 17543218 17543238 TCAAGAAAGGATCATGGTGGA 59 17543260 17543278 GCTGGCCATATAGTTCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7580 FBgn0036728 FBtr0075222 1 1 3 173 3L 17467927 17468005 CGGCAAAGTTTAAAGATCCG 57 17468141 17468159 CATACCAAGCAGTTAGGCT 57 NA InUTR Drosophila melanogaster 61 CG32170 FBgn0052170 FBtr0075258 3 1 1 60 3L 16871927 16871947 AAACCACAGAGTAGACCACAG 59 16871968 16871987 TAACAGGTGCATTGTAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sina FBgn0003410 FBtr0075333 2 1 2 164 3L 16849047 16849065 GTGGGCACAATAGTTTGGA 58 16849505 16849523 GGACATTGGAAGGGTTCTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dbp73D FBgn0004556 FBtr0075347 3 1 1 132 3L 16723747 16723822 ACTGTTAACAGATATACCGAGG 57 16723636 16723656 CTTCTATGGCTTCATGTTTCC 57 NA Drosophila melanogaster 61 Mo25 FBgn0017572 FBtr0075358 3 1 1 60 3L 16607332 16607350 CCAACTTCCATACGGATCG 58 16607290 16607308 ATCAGATAGGCCTTCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4098 FBgn0036648 FBtr0075361 2 1 1 171 3L 16601942 16601960 CAACGTGCAGAATGGACTG 59 16601733 16601810 TATGATATTCTTGCCGGTTGTC 58 NA Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364,FBtr0100244 3 2 2 128 3L 16583553 16583571 CGTCAACATAGCCGAAGTC 58 16583386 16583462 AGACATCCCGTAGAAATCCT 58 NA Drosophila melanogaster 61 CG34451 FBgn0085480 FBtr0112757 3 1 1 81 3L 15682486 15682507 GGAAATATCAACCCAGTCAACC 59 15682343 15682445 TGATGGTGGACAAAGGACTC 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 3 1 3 103 3L 15516656 15516675 AGTCCAATGATGGCTTTGAC 58 15515584 15515662 ATCCAGTATGGTGACAAATCTC 58 NA Drosophila melanogaster 61 CG32148 FBgn0047338 FBtr0075630 1 1 1 76 3L 15016817 15016898 GCTTTAAGAAGTCCGAACCA 58 15016937 15016955 ATCTTTGCAAGGATCCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 2 3 3 113 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033096 14033178 CGGCTTGTTAAAGACCTGC 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 3 5 5 120 3L 13475358 13475376 AGAAGGAGTACGCCTACCT 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 CG17672 FBgn0083978 FBtr0110982 2 1 1 80 3L 13028860 13029027 AGTGTGCGAATCCTCTGAG 59 13029071 13029089 GGAATGACCAGGAACAGGT 59 NA Drosophila melanogaster 61 MICAL-like FBgn0036333 FBtr0075898 3 1 1 60 3L 13005471 13005490 TGATAGCCTAGAGACTGACC 57 13005430 13005451 CCGATTCTTGATGCTCATATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Klc FBgn0010235 FBtr0075951 1 1 1 80 3L 12740047 12740066 CAATTGCTAACGTCAAACGA 57 12739919 12740005 TTTCGCATTCTTCTCCTCAG 58 NA Drosophila melanogaster 61 CG32111 FBgn0052111 FBtr0075910 1 1 1 80 3L 12626976 12626997 GAATTAACCGACTATACCCGAC 58 12627038 12635157 GATTTGTAGAACCGGCCAC 58 NA InUTR Drosophila melanogaster 61 Smyd4 FBgn0036282 FBtr0075985 2 1 1 98 3L 12394419 12394438 ATTGAATGACCTCAAGCTGG 58 12394282 12394358 TCTCCCATGACTGCATAGG 58 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301052,FBtr0301053,FBtr0301055,FBtr0301054,FBtr0301057 1 6 6 85 3L 12206875 12206893 TCGATATGGTCGGTGATCG 59 12206565 12206826 GATCCCTTGAGATCCTCGT 58 NA Drosophila melanogaster 61 Klp68D FBgn0004381 FBtr0076030 1 1 1 80 3L 11789706 11789831 ATGAGCATAGTTCAAGATCCC 57 11789873 11789891 CCACTTTGATGGTGTTCGT 58 NA Drosophila melanogaster 61 CG7368 FBgn0036179 FBtr0110884 3 1 1 81 3L 11596577 11596665 ACCAACAGAATGTGGTGCT 59 11596707 11596728 GGTATACTAATGGTTGTCGTGC 59 NA Drosophila melanogaster 61 CG18628 FBgn0036091 FBtr0076256 1 1 1 204 3L 10632897 10632916 CCATGAAGTTCCTACTCGTG 58 10633146 10633164 AATGGAGATGTCTAGCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6685 FBgn0036062 FBtr0076355 1 1 1 80 3L 9961132 9961213 GCATTCTCCAGTATGTGGC 58 9961070 9961091 TGTTGTTTAAGCTAACGGAGTC 59 NA Drosophila melanogaster 61 CG3222 FBgn0036014 FBtr0076379 3 1 1 60 3L 9592629 9592651 CTGTTCAATAGTAAGACCTGCTG 59 9592671 9592689 ACATGAATTGATGGAGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32036 FBgn0052036 FBtr0114525 3 1 1 92 3L 9481736 9482172 CATCGAAGTTCAGAAATTCGGA 59 9481665 9481686 GGTATCTTGTTCAAGTCTTGCT 58 NA Drosophila melanogaster 61 CG33926 FBgn0053926 FBtr0091930 1 1 1 80 3L 9436450 9438807 ATATTAGGGCCATAGAGGACG 58 9438849 9438867 TCTCGCTGTCAGTGATCTC 58 NA Drosophila melanogaster 61 Nf-YA FBgn0035993 FBtr0076504 3 1 1 282 3L 9435244 9435262 ATGTCACGACAAGCCTCTC 59 9434823 9434842 ACACTTAAATTGTTGCCGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4911 FBgn0035959 FBtr0076542 1 1 1 100 3L 9064610 9064690 ATCGAACAATGCTTTGTGGA 58 9064529 9064547 TAGTATGAGAGGGCCTCGA 58 NA Drosophila melanogaster 61 CG8006 FBgn0035857 FBtr0076698 3 1 1 60 3L 8205542 8205564 GATAGCCAAGTTTATCCAAGGAC 59 8205584 8205602 CAGTGTGACTATCAGCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 melt FBgn0023001 FBtr0100141,FBtr0302044 1 2 2 80 3L 7134393 7134470 CAGTCAACGGAAATAGCGAG 59 7134513 7134531 TCCTGCTGGTATTATCGCT 58 NA Drosophila melanogaster 61 CG8629 FBgn0035742 FBtr0076925 3 1 1 76 3L 7121236 7121256 AGTTCTACGGTCTCTTCAAGC 59 7121180 7121200 CTTCTTGAGATCCAGAATGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8641 FBgn0035733 FBtr0076931 1 1 1 101 3L 7055136 7055467 GTTATGCTCGGCTCATCAC 58 7055053 7055071 GTGGAACTCCTCGATGGTC 59 NA DesignRelaxed Drosophila melanogaster 61 vn FBgn0003984 FBtr0077082,FBtr0300010 2 2 2 81 3L 5810734 5811006 CCTCACCAGTTCACTTTCC 58 5810671 5810689 CAGGTGCCATTATGGAAGC 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 1 2 6 99 3L 5764462 5764727 CTGCGAACAGACAATAACGG 59 5764789 5764807 GATTGCTTGTCGGATGCTG 59 NA Drosophila melanogaster 61 CG10590 FBgn0035622 FBtr0077127 3 1 1 92 3L 5596718 5596796 AATCACAAGTACAATGACCGG 58 5596646 5596664 AGAGAAGTACGCGTACGTC 59 NA Drosophila melanogaster 61 CG5146 FBgn0035617 FBtr0077085 1 1 1 104 3L 5577795 5577867 CGGATGTGATTTGGACAGC 59 5577935 5577953 TTTCCGCTTTAGTCCTGCA 59 NA Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 2 2 2 80 3L 4287619 4287699 TTAAGAATTGGCTTGCTAGCG 59 4287741 4287759 TGAAACTGAACTTGGTGCC 59 NA Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 2 2 2 122 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191880 4192203 TTGCTCAAGTTTCCTTGCA 58 NA Drosophila melanogaster 61 CG18675 FBgn0040696 FBtr0073218 3 1 1 165 3L 4174624 4174644 GCTAATGAGCGACTATTTGGG 59 4174830 4192200 CTCAAGTTTCTTGAGTTCCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32260 FBgn0052260 FBtr0073214 1 1 1 80 3L 4143689 4143708 AATCGGTTCGGATATGATGG 57 4143751 4143982 TGACAGGATTGAGGTCTCC 58 NA Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073210 1 1 2 133 3L 4104108 4104213 CGGTGCTGAACTTATAGTTTCG 59 4104307 4104325 CTTCTCCACCTGCAGATCC 59 NA InUTR Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300988,FBtr0300989 1 2 2 105 3L 4069638 4069718 ATGAACCCAAATCGTAGCA 57 4069785 4069805 AGTAATCTTTCGACACGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18869 FBgn0042179 FBtr0073204 3 1 1 80 3L 4060514 4060533 AAGTTCCCAAGACTATGGGC 59 4060574 4060651 TCACTAAGTGAATCAGTGGCT 59 NA Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073178 1 1 3 120 3L 3902597 3902615 AAAGTAAAGCGCAATCAGC 57 3901739 3901758 AGTCTTCACAAAGATCTGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42525 FBgn0260430 FBtr0300854 3 1 1 81 3L 3189229 3189343 AGTAACAGATTCGAGTACCCT 58 3189168 3189186 TTCAGTCACTGTGGAATCG 57 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 3 4 4 63 3L 3053679 3053698 GTTTGTACGATCCGTTCACG 59 3053723 3053799 GAATTGATGCCGAATAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 1 1 1 107 3L 2475116 2475197 AATGTCATGCCAATGTGGG 58 2475027 2475045 GATCTACCACTCGGTAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 1 2 2 80 3L 2389944 2389965 TGTTCAGAGGAATGGATTACCA 59 2389825 2389905 TGGCTTGATAGTAGGTCTGTC 59 NA Nonspecific Drosophila melanogaster 61 Cdc37 FBgn0011573 FBtr0072777 3 1 1 83 3L 1795984 1796183 GGAGGCCCTGAAGAAAGAG 60 1796226 1796248 TCCTTCTTAATCATCTCGCTCTC 60 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 1 1 2 163 3L 711669 711747 ACTTACGAAAGGAAGTGGTG 57 711525 711545 TGAACTGCATCGATATCTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 1 2 2 80 3L 709123 709144 TTACCGATGAAGAGGAAATTGG 58 709008 709083 CGTGAGATTCAACAGTCTCC 58 NA Drosophila melanogaster 61 CG34269 FBgn0085298 FBtr0112464 1 1 1 60 3L 528670 528688 CTTCCAGAATTTCGTGCGT 58 528708 528730 CTCCTGTGAGAGTAATAGTTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 2 2 2 80 3L 364835 364853 CACAAGGAGAGTAAACGCT 58 364896 364976 CTGAAGGTGTATCCGAAAGG 58 NA Drosophila melanogaster 61 mthl14 FBgn0052476 FBtr0072501 3 1 1 108 3L 248608 248680 AATCCGTGCAACAGTTCTC 58 248751 248770 CAGTGTATGATTCGTTGCCA 58 NA Drosophila melanogaster 61 CG13875 FBgn0035104 FBtr0072476 2 1 1 80 3L 181024 181043 ATTTGGATAGTAGTGCCAGG 57 181084 181163 GAAGATGTAGCTGGTATTCCT 57 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 2 2 2 108 3L 151929 151947 TACAATGGTAGCGAAGAGC 57 151782 151860 ATAAAGTATCCCGTTCATCAGG 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-841a FBgn0086669 FBtr0091766 3 1 1 62 2R 17214614 17214635 TGTAAGCTTGCTAGAATAAGGG 58 17214657 17214676 TCTGGGCTGAAGATAGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A2589a FBgn0086023 FBtr0114299 3 1 1 85 2R 17212741 17212762 TCATACTGAGTGCCTAAATCGA 59 17212808 17212826 TATCAGACAAATGCCTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347a FBgn0083054 FBtr0113513 3 1 1 79 2R 14030352 14030372 CGACTAAGATTCAATGTTGCC 57 14030413 14030431 TCTACTTCTGTGGATGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33451 FBgn0053451 FBtr0086443 1 1 1 60 2R 15617520 15617538 ATACATCGGTTCTCGTCCG 59 15617478 15617496 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391 3 1 2 165 2R 20826352 20826501 CAGCTGAGCACCATAACTG 58 20826630 20826648 CAACTTTCTTCCAGGGTCC 58 NA Drosophila melanogaster 61 ETH FBgn0028738 FBtr0072426 2 1 1 106 2R 20682872 20682891 AAGATCACCAAGAACGTACC 57 20682727 20682803 GTAACAGAGCTGTGCTCAC 58 NA Drosophila melanogaster 61 CG4741 FBgn0035040 FBtr0072337 2 1 1 98 2R 20501484 20501563 TGATTATGAGCGCCAAACG 59 20498773 20498792 TGTTCGTCACATTGATCTCC 58 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089867,FBtr0089868 3 2 2 80 2R 20462814 20462896 TGCATTGTGATCAATGGAGAC 59 20462935 20462956 AAAGAGCGATTTGTAGATGGTG 59 NA Drosophila melanogaster 61 Ir60c FBgn0259186 FBtr0302287 3 1 1 60 2R 20406416 20406436 GTTCCCTCAAGCAATATAGGT 57 20406455 20406476 TTGAACCAGAGCAGATAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13590 FBgn0035012 FBtr0072353 2 1 1 111 2R 20381349 20381427 CTATCTAAGCTGCGGAGAGG 59 20381257 20381275 TCGAGAATAGGCCTTCAGG 58 NA Drosophila melanogaster 61 bs FBgn0004101 FBtr0290089 3 1 2 262 2R 20232189 20235744 ATGAAGAAGGCCTACGAGC 59 20235969 20235988 CTTACTTTCGAGTCCTCGTC 57 NA DesignRelaxed Drosophila melanogaster 61 slbo FBgn0005638 FBtr0072272 2 1 1 63 2R 20220046 20220064 TGAGATGACCAACGAGCTG 59 20220001 20220019 ATTGGCGTGGTTCATTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13563 FBgn0034966 FBtr0113117 3 1 1 102 2R 19943030 19943101 TACATGACCACTGGACTGC 59 19943222 19943240 CGATCCCTGGATGATCCAC 59 NA Drosophila melanogaster 61 CG4091 FBgn0034894 FBtr0072097 2 1 3 149 2R 19588106 19588334 GAACTTGGAAGTCATGGCG 59 19587975 19587993 CTGTAGAGGTTGTCCAGCA 59 NA Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072102 2 1 4 145 2R 19496194 19502203 GAACGCAGTTGCTGTAAGG 59 19496067 19496085 TGGTTGTTGGGAAAGAGGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 bw FBgn0000241 FBtr0072117 1 1 2 86 2R 19416591 19416609 ATGTACTCCGGCATTGGAG 59 19416471 19416543 GAAGATCATCTCGTTGCTGAG 59 NA Drosophila melanogaster 61 CG12782 FBgn0034838 FBtr0072048 2 1 1 99 2R 19152594 19152612 AGAAAGGTGGGACTTCACG 59 19152457 19152532 GGTCCCAGAACCTAATGGAC 59 NA Drosophila melanogaster 61 Gr59b FBgn0045482 FBtr0071965 3 1 1 61 2R 18970643 18970661 GTGGAGTGAAGTTCGTTGG 58 18970746 18970767 TCGTACTATTCGCATAGATCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 1 1 1 60 2R 18825640 18825658 ACGCCAGAGATCTGAATGG 59 18825682 18826030 GTGAGGAAGGAACACTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 RYBP FBgn0034763 FBtr0071868 3 1 1 141 2R 18558698 18558717 ATATAGAAACTCGGCGGAGG 59 18559205 18559223 GTTGGGCATGTTGACACTG 59 NA DesignNoJunction Drosophila melanogaster 61 MED16 FBgn0034707 FBtr0071770 3 1 1 60 2R 18071141 18071161 GTTCTTTCAGAATGGCAAAGG 58 18071178 18071201 ATAGTAGGTGTGATCCTTCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED16 FBgn0034707 FBtr0071770 2 1 1 60 2R 18071140 18071161 AGTTCTTTCAGAATGGCAAAGG 59 18071178 18071200 TAGTAGGTGTGATCCTTCTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6758 FBgn0034704 FBtr0071767 3 1 1 82 2R 18064255 18064331 TCTATGAGGATCCCTTTCGA 57 18064376 18064394 TATTCGCTCGTTGTGATCC 57 NA Drosophila melanogaster 61 CG30395 FBgn0050395 FBtr0300226 2 1 1 80 2R 17656073 17656153 ACTCAACCGATGATTTGAATCC 59 17656241 17656261 GACTTATCGGAAGAACACCAG 58 NA Drosophila melanogaster 61 CG33655 FBgn0250824 FBtr0300632 1 1 1 77 2R 17207399 17207417 GATCTAACATGCGAGGCAG 58 17207279 17207298 TGCTTTCGATTTACCATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 1 2 2 80 2R 17009342 17009360 GTTGCCATGAACACGAGTC 59 17009402 17009519 CTCTATGAGATCAGCCTCCTG 59 NA Drosophila melanogaster 61 l(2)05510 FBgn0028622 FBtr0086258 3 1 1 81 2R 16451351 16451369 AGCGAACAAGGTCTACGAG 59 16451215 16451308 CAGGACCTCATTCTTGTTGAC 59 NA Drosophila melanogaster 61 Obp57d FBgn0043536 FBtr0299804 2 1 1 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG16898 FBgn0034480 FBtr0086325 1 1 1 80 2R 15891382 15891461 CGATTCATGTGTCTGTTAGCC 59 15891322 15891342 ACTTGAGAAGTCTGAGCTCAC 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 2 6 6 124 2R 15418200 15419688 TATTGAGGGTAAAGGCACCA 58 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 CG15084 FBgn0034402 FBtr0086619 1 1 1 60 2R 14738974 14738994 CAGCTATATGGCCAATAGTCG 58 14739013 14739034 ATTGATCTCTTTCTTCTGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 3 2 2 90 2R 14683829 14683847 CTCCCTTCGCGTTAATCTC 58 14683654 14683777 CTCATTCCAGTCGAATTCAGG 58 NA Drosophila melanogaster 61 GstE8 FBgn0063492 FBtr0086676 2 1 1 60 2R 14295551 14295571 CATTTCATCTGGGACTCACAC 59 14295593 14295611 CACTCTGGCCATACTTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5084 FBgn0034288 FBtr0086804 2 1 1 108 2R 13906871 13906949 CACTGTGTCCACTTTCGAC 58 13907021 13907039 CTCGGCATTCATCTGAGTG 58 NA Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 2 2 2 103 2R 13623909 13623927 CTTCGCTACTGCACTTGTG 59 13623769 13623845 TGCAGGATCAGATCCATAACTC 59 NA Drosophila melanogaster 61 CG6459 FBgn0034259 FBtr0086892 2 1 1 89 2R 13559431 13559449 GGTGGACATCATAAAGGGC 58 13559302 13559378 AAGACATCGTTGTACTCGC 58 NA Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0086946,FBtr0113090 1 2 2 60 2R 13438864 13438885 CGGATATTCAGAATCCTTTCCC 58 13438958 13438976 GGATCTTCTACGGGCTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086992 1 1 7 80 2R 13239798 13246817 CGACAGATTAGAGACCTCAC 57 13246860 13246878 TTGATGTTGTTCAGCTGGT 57 NA Drosophila melanogaster 61 CG6426 FBgn0034162 FBtr0087042 3 1 1 128 2R 12758830 12758848 CAACCAGACACGTTACTGC 59 12758939 12759028 CAATTGGCATACGCATCCTC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0113379,FBtr0087112,FBtr0113381,FBtr0087113 1 5 5 80 2R 12566688 12566706 TACTATCATCGCATCGGCA 58 12566561 12566644 GCACTTGAGATCGTTACGG 58 NA Drosophila melanogaster 61 RpS15 FBgn0034138 FBtr0087123 1 1 2 187 2R 12458505 12458706 AAAGATGGCCGATCAAGTC 57 12458268 12458286 TCTTGATCAGAGCCATTGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG15712 FBgn0034131 FBtr0087127 1 1 1 87 2R 12372573 12372591 AACAGAGCACTGAATTCGC 58 12372449 12372522 TCTCTGGAAAGTCTGGCAC 59 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087146 2 1 5 97 2R 12225931 12226960 TAAACGTAACGAGCTCAGGA 58 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA InUTR Drosophila melanogaster 61 Nox FBgn0085428 FBtr0112650 1 1 1 80 2R 12202783 12202801 GATCAACTGGTAGCTCCAC 57 12202843 12202953 GGCCATCGATAAATATCTCCA 57 NA Drosophila melanogaster 61 Atg9 FBgn0034110 FBtr0087141 1 1 1 60 2R 12182800 12182820 CGCTTCAAGAACTACCTAGTG 58 12182842 12182860 TGTGGAACCTTACAGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsf3 FBgn0034094 FBtr0087130 1 1 1 82 2R 12115392 12115410 TGATCTTCGAGGTGCAAGG 59 12115452 12115542 CTTCAAAGTAATTAGCCAGGACC 59 NA Drosophila melanogaster 61 CG10734 FBgn0034082 FBtr0087250 2 1 1 125 2R 12046096 12046193 AGAGCTGAGAAGTCAAAGC 57 12045989 12046008 TCTGGTCTCAATTTATCGCA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231,FBtr0087232 3 2 2 231 2R 12026275 12026293 TCCACGATGTCCATCTACG 59 12027933 12028013 TTTCGAGTCCAGTCACTGG 59 NA DesignRelaxed Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089589,FBtr0089592,FBtr0089590,FBtr0089591 1 5 5 86 2R 12023788 12023806 ATCAGTAATGCCACCCAGG 59 12023854 12023938 ATCAGAGTATTCCTGAGAGGC 58 NA Drosophila melanogaster 61 CG30093 FBgn0050093 FBtr0087199 3 1 1 72 2R 11831775 11831793 AAGTACGAGTACCTGAGGC 58 11831828 11831847 CATTGTGAAACAAACTGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8297 FBgn0034050 FBtr0087290 3 1 1 87 2R 11822386 11822407 CCAACCAACGATATAATGAACC 57 11822510 11822530 TTAGTAATCCGGAGAGTTCCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8297 FBgn0034050 FBtr0087290 2 1 1 86 2R 11822386 11822407 CCAACCAACGATATAATGAACC 57 11822510 11822529 TAGTAATCCGGAGAGTTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir52b FBgn0050469 FBtr0273350 1 1 1 60 2R 11389333 11389352 GTTGGTCATTCTACTCTGCT 57 11389373 11389393 AACGGAAATATCCGCTATGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112518,FBtr0112517 3 2 2 81 2R 11353241 11354092 TGGCTACAAGGTGACTGTC 59 11354136 11354155 TGGGAAGTATCCAACTCGTC 59 NA Nonspecific Drosophila melanogaster 61 CG8179 FBgn0034020 FBtr0301638 3 1 1 205 2R 11354266 11354359 GATTGTCATACAGACCGGC 58 11354528 11354546 TCCTACGCTTGGTCTTGTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393,FBtr0087394 2 2 2 60 2R 11184880 11184898 AACTTTACTGTCTCAGCGG 57 11184838 11184857 ATGGACATCTCTTCCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 U3-55K FBgn0053505 FBtr0091445 3 1 1 80 2R 10747002 10747023 ACACAAAGATAGCATTGAGTGC 59 10746886 10746961 AAACCGATTGCTCCATCCA 59 NA Drosophila melanogaster 61 Ciao1 FBgn0033972 FBtr0087460 2 1 1 60 2R 10741538 10741557 ATCAGGACGTAAACTCGGTG 59 10741497 10741516 CTGCATGATATCAGTTGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ciao1 FBgn0033972 FBtr0087460 1 1 1 60 2R 10741540 10741558 GATCAGGACGTAAACTCGG 57 10741498 10741516 TGCATGATATCAGTTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LamC FBgn0010397 FBtr0087512 3 1 1 93 2R 10459030 10459048 GATCCACCCAACAATCTGG 58 10458807 10458973 TGGCAACATCCTCTTTGTC 58 NA Drosophila melanogaster 61 CG30197 FBgn0050197 FBtr0087494 1 1 1 164 2R 10401806 10401824 AGGTTCAGAACTGTACGCC 59 10401951 10402317 TAGCTCCAGAGTTCTTGCTG 59 NA Drosophila melanogaster 61 CG8257 FBgn0033900 FBtr0087580 2 1 1 114 2R 10048588 10048665 TGTATAGCCTCAAGGAGGG 57 10048492 10048513 CTCCATTTAAACGGACTATCCT 57 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964,FBtr0301591 1 15 15 80 2R 9757594 9757612 TGGTCATGCTGTGTACCTG 59 9757467 9757551 TCTGGGAGTCTCCAAATCTG 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299765,FBtr0299755,FBtr0299759,FBtr0299761,FBtr0299764,FBtr0299762,FBtr0299754,FBtr0299756,FBtr0299757,FBtr0299763 2 12 12 86 2R 9306902 9306986 GGCAACCTCGTTTATACTTACG 59 9306837 9306855 CAGATGGGTAAGCCAGGTC 59 NA Drosophila melanogaster 61 CG10814 FBgn0033830 FBtr0087720 1 1 1 176 2R 9264310 9264328 ACAATATCTGGAGGGCACC 59 9263853 9263871 TGAATCTGCAGGAGTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4616 FBgn0033806 FBtr0087737,FBtr0087736 1 2 2 80 2R 9094784 9094802 ACCAAATGGACAGATCCCT 58 9094844 9094920 CCTTGGTATTACGATCTTCGG 58 NA Drosophila melanogaster 61 seq FBgn0028991 FBtr0100501 1 1 1 90 2R 9072338 9072356 AAACTACGGCCAGTAGTCC 59 9070724 9072284 GTTGTGACCACATTGTCGG 59 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087799 3 1 3 108 2R 8838844 8839685 CACAATGGACAACACCTGG 59 8838754 8838773 GGATCGACCCACATAGATGG 59 NA InUTR Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 2 2 2 141 2R 8763445 8763624 GGTCTACTTGATATTGATGTGCC 59 8763264 8763283 CATGGTCACGATAAGAACGG 58 NA Drosophila melanogaster 61 CG3790 FBgn0033778 FBtr0087815 1 1 1 80 2R 8760660 8760740 CCATGATCAATCATATGGGTCAG 59 8760602 8760623 CAAATCCTCCCAAGATTAGCAG 59 NA Drosophila melanogaster 61 CG12442 FBgn0033770 FBtr0113076,FBtr0087849 3 2 2 81 2R 8588060 8588139 GATGTATGAACTAAGTCTACTCCC 58 8588179 8588197 ACTCAGCTCGTAGATCTCC 58 NA Drosophila melanogaster 61 CG8785 FBgn0033760 FBtr0087881,FBtr0087882 2 2 2 88 2R 8529479 8529554 ATTTCGCCAAGCAATTTGTG 58 8529410 8529431 GAAGGATGTCGCAATAAATACG 58 NA Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944,FBtr0087945 2 2 2 206 2R 8396140 8396224 GCGTGACGTGAATCAACAG 59 8395874 8395892 TCCTCATCTGAACTGGTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG8550 FBgn0033742 FBtr0087935 3 1 1 60 2R 8359434 8359452 TTTACTGTGCTCTTGCCTG 58 8359475 8359494 GTTGATGTCCACTATTGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33627 FBgn0053627 FBtr0091604 1 1 1 110 2R 8298863 8298881 ATATGCCAGTTTGCCAAGG 58 8298955 8299021 GTAAAGGCCCTTGGTATGC 58 NA Drosophila melanogaster 61 CG30047 FBgn0050047 FBtr0087905 3 1 1 80 2R 8241559 8241637 ACACGATCGAGGATACTATTGG 59 8241673 8241696 TAGAATAGGTAGCAGAAGTACAGG 59 NA Drosophila melanogaster 61 CG8841 FBgn0033713 FBtr0087965 1 1 3 129 2R 8213490 8213587 CTGGCATTTGACTACTGCG 59 8213379 8213397 GTTCAACTTGGAGTCCGTG 58 NA InUTR Drosophila melanogaster 61 CG13171 FBgn0033701 FBtr0087995 2 1 1 60 2R 8101643 8101663 TTCAACCTAATCCAAGAGGAC 57 8101685 8101703 GCAGATTCTGGAATCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13178 FBgn0033685 FBtr0088019 1 1 1 80 2R 8031692 8031887 AATCGGTCCAGGTTATCCAC 59 8031631 8031650 GTTTCGATCCGTTTAGGAGC 59 NA Drosophila melanogaster 61 RpIII128 FBgn0004463 FBtr0087977 3 1 1 87 2R 7927429 7927449 AGAATAGATTCGGTGCCTCTC 59 7927497 7927567 AACTTGGAGCCCATGTACTC 59 NA Drosophila melanogaster 61 rho-7 FBgn0033672 FBtr0088045 2 1 1 81 2R 7875796 7875879 CTTCACGGGAGCATTTACG 59 7875733 7875754 TTCTAGGATTAGGCTACGTGTG 59 NA Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088036 2 1 2 74 2R 7779890 7781084 TGTGTAATCATCCAACATGGG 58 7781120 7781138 TTACCGGAATCGACGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sln FBgn0033657 FBtr0088032 3 1 1 103 2R 7737359 7737479 GTACTCACAGGTATTGGAGG 57 7737545 7737563 GAAACGCAGATTCCATTGG 57 NA Drosophila melanogaster 61 CG42493 FBgn0260007 FBtr0300507 1 1 1 80 2R 7666501 7666577 TCCTTAGAATAATTGCCCTCG 57 7666619 7666637 ATTCCTCCTGAGACTCAGC 58 NA Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 2 2 2 109 2R 7327828 7328587 CGGTTAAGATTCTCATCGATCAG 59 7328656 7328674 GAGTCCCAGGAAGAACTCG 59 NA Drosophila melanogaster 61 kappaTry FBgn0043471 FBtr0301671 1 1 1 60 2R 7226064 7226084 CGTCATCCATATCTAGTCTCC 57 7226024 7226042 CGTGCATATAGCTGGACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Eb FBgn0033598 FBtr0088112 2 1 1 60 2R 7143135 7143154 AGGATGAGCAGAAGTATCGC 59 7143175 7143195 ACAGCAACTTCCTTATTGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 1 4 4 80 2R 7101695 7101780 GAAAGTAGTGATACGGATGAGTC 58 7101817 7101838 CGTCATTGATAACGAGAGTAGG 58 NA Drosophila melanogaster 61 Cyp12d1-p FBgn0050489 FBtr0089419 1 1 1 89 2R 7008750 7008769 CATCTTTATGCAACCCAGGG 59 7008616 7008698 CGGATTTCCTTAATGCGCT 58 NA Nonspecific Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088200 2 1 2 60 2R 6797437 6797456 GTTCTAGTGCTATTGCTGGT 57 6797475 6797577 CCAGATTGATGTTTATCTCGCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 1 2 2 81 2R 5955387 5955458 GGCTGCATTAAAGTTGCTG 58 5955324 5955343 AAGTAACCATCTGTGGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2292 FBgn0033479 FBtr0088431 1 1 1 120 2R 5953208 5953226 CATGGAATGACGGATTCGG 58 5953048 5953066 TAAATGTTCGCCCTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 2 2 2 81 2R 5772637 5772717 CACCATCCGCCAATTTCTG 59 5772574 5772593 TCGACTTGGTCCATACATGG 59 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0113061 3 1 4 60 2R 5717355 5721025 CTCCAATTATAGAGCGAACGAC 59 5717316 5717334 TGAATCTGGTCGTGATCGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG30000 FBgn0050000 FBtr0088463 3 1 1 105 2R 5493791 5493810 AATTGACCGACGAATATCGC 58 5493878 5493960 GCGAGATATCGCACTATGG 58 NA Drosophila melanogaster 61 CG13739 FBgn0033403 FBtr0088558 3 1 1 104 2R 5238943 5238961 TACTCTCGAGCAGCAAGTG 59 5238622 5238640 CATGTAAGTCAGTCCGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30344 FBgn0050344 FBtr0088583 3 1 1 80 2R 5035374 5035456 TGAAGTTGGCAAGATCTTTGC 59 5035498 5035516 ACGGTTGTGTACAGAGGTG 59 NA Drosophila melanogaster 61 CG13749 FBgn0033353 FBtr0300706 2 1 1 80 2R 4821198 4821217 GCAGATCACGTCTATACGGA 59 4821260 4821337 AAGCGTATGTGTTCCTGGT 59 NA Drosophila melanogaster 61 CG14744 FBgn0033324 FBtr0113056 2 1 1 87 2R 4596072 4596146 TGGGAGAGGGTATAGTGCT 59 4596003 4596021 CTGATGTAGTACCGCAGCA 59 NA Drosophila melanogaster 61 LvpL FBgn0002571 FBtr0088758 3 1 1 81 2R 4345259 4345280 CAGTTCTACCAGATCTATCCCA 58 4345137 4345220 GCTGTTGCGTAATACCTATGAG 59 NA Drosophila melanogaster 61 sut3 FBgn0028561 FBtr0088779 3 1 1 81 2R 3978154 3978172 ATGATGACGATCTCCTGCC 59 3978211 3978297 CATGTATAGTCGACATTAGTTCCAG 59 NA Drosophila melanogaster 61 slv FBgn0025469 FBtr0088824 1 1 1 112 2R 3969002 3969378 CGGATTCTTATCGTGCAGC 59 3968908 3968926 AGATCAGCGTGTAGACCAG 58 NA Drosophila melanogaster 61 nito FBgn0027548 FBtr0088857,FBtr0088858 1 2 2 118 2R 3850891 3850967 GAATATAGACCACGCGGTC 57 3851049 3851067 TAGGGATCAATCGGAGGTC 58 NA Drosophila melanogaster 61 Gapdh1 FBgn0001091 FBtr0100479,FBtr0088903 1 2 2 60 2R 3679892 3679910 TTGTGGATCTTACCGTCCG 59 3679850 3679869 ACCTTAGCCTTGATTTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cn FBgn0000337 FBtr0088931 1 1 1 81 2R 3672004 3672436 TATTGGAGCAGGACTTGTGG 59 3671942 3671961 CCGGTACTCGTACAAATCCA 59 NA Drosophila melanogaster 61 CG1941 FBgn0033214 FBtr0088927 1 1 1 80 2R 3598082 3598101 TGGCCTTCCTAATCCTATCC 58 3598144 3598213 GGCTTCCATAGAACAGCAC 58 NA Drosophila melanogaster 61 Rpt1 FBgn0028687 FBtr0088947 2 1 1 60 2R 3540425 3540445 TTGGAGCTGATTAACCAACTG 58 3540385 3540406 CCATCAGCACCTTGATATTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088905 2 1 2 138 2R 3421202 3421220 CAACATCTACGACGTCACC 58 3422923 3422941 CTTCTTCATCATGTCGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088973 2 1 3 100 2R 3330878 3330956 CATGTAAGCGCCTCAAGTG 59 3331019 3331038 GCCATAGTAGATACGACCCA 58 NA InUTR Drosophila melanogaster 61 CG11145 FBgn0033168 FBtr0089004 2 1 1 80 2R 3315583 3315663 TATCTCCTTCGACTATATGCGC 59 3315524 3315544 CAAGTAGGGATCGAAGGACTC 59 NA Drosophila melanogaster 61 CG11112 FBgn0033164 FBtr0113047 3 1 1 107 2R 3288299 3288381 TTTGTACGATCGCTTTGGT 57 3288449 3288470 TTATGACCTTATCCTCGAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Eq FBgn0033138 FBtr0089060 1 1 1 80 2R 2950520 2950538 GAGACCATTTACGACGCCT 59 2950275 2950478 GCAGCAGTGATACTTGATCTC 59 NA Drosophila melanogaster 61 Tsp42En FBgn0033135 FBtr0089034 3 1 1 101 2R 2940734 2940817 TTTGGAGCTATGTGATCTGC 58 2940881 2940899 AATCCTTCTTGGATCGCTC 57 NA Drosophila melanogaster 61 CG33914 FBgn0053914 FBtr0091918 2 1 1 80 2R 2925045 2925123 CTAACAGAGTTGCATGGAGTC 58 2924985 2925003 CTCCACGATACTCATGCTG 57 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 1 1 1 288 2R 2894137 2895248 GATCGTTGGCATCCTACTG 58 2895563 2895581 ATTGGACATATCGCCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 3 2 2 74 2R 2771951 2772027 GACCTTAGAGAAGCTGGGC 59 2772065 2772083 GACTTATCGGCGAACAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 3 5 11 143 2R 2764835 2764853 GATGTTCTCCGATCAGGCT 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 CG9422 FBgn0033092 FBtr0086120,FBtr0086121 1 2 2 105 2R 2579560 2579634 CTACACCAGTGTGGAGGAG 59 2579703 2579721 CTCGTCCAGACTCATGAGG 59 NA Drosophila melanogaster 61 CG10395 FBgn0033019 FBtr0086087 3 1 1 140 2R 1238319 1238399 GAAAGAAGGTTCTAAGGATGCAG 59 1238498 1238517 TTTCTCGTGCGTCTAAGAGG 59 NA Drosophila melanogaster 61 d4 FBgn0033015 FBtr0086083 3 1 3 179 2R 1182392 1182412 ACGATGAAATGGACACATCAC 59 1182553 1182629 GACGATTGCCTTTACGTCC 59 NA Drosophila melanogaster 61 CG9247 FBgn0032924 FBtr0081499 3 1 1 122 2L 21162328 21162346 GGCCGAGGAATATCTGGAC 59 21162169 21162244 TTGTACCGATCGAGTAGATGC 59 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826077 20826641 CACTTGTCATTGTCGATGGT 58 NA Drosophila melanogaster 61 l(2)37Cb FBgn0086444 FBtr0081163 2 1 1 120 2L 19126467 19126486 GCGAGTACAAGAAGCAACTG 59 19126306 19126385 ACGTATTCAGATCGCTCTCC 59 NA Drosophila melanogaster 61 hkl FBgn0086441 FBtr0081145,FBtr0081144 3 2 2 127 2L 19047035 19047157 ATTCCACTGAAGACGAGGC 59 19047247 19047266 TGAAAGTATTGCCCGATCCA 59 NA Drosophila melanogaster 61 CG7180 FBgn0032673 FBtr0081061 3 1 1 60 2L 18183080 18183100 GGCTACCTCAAGAAGTTAAGG 58 18183040 18183061 TATATTGCTCCACATTCTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 3 2 2 148 2L 18134815 18135581 CATTTCAACGAGGTGATCCA 58 18134686 18134704 ATAGGAACATCGTAGCGCA 59 NA Drosophila melanogaster 61 CG5755 FBgn0032664 FBtr0081033 1 1 1 60 2L 18097890 18097911 CTGCTGGTATATTGAATCGTCC 59 18097931 18097950 AGGGAATCGAAATTGTAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 2 2 2 88 2L 18082140 18082228 ACATTTACCTTCATTGGCTGC 59 18082278 18082296 CATTCGCATTTAGGGCCTC 59 NA Drosophila melanogaster 61 CG42556 FBgn0260758 FBtr0301255 2 1 1 60 2L 16890468 16890487 CTGTTCTACATGCCAAACTG 57 16890507 16890528 GATCCAACGAAGAAATAAGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idgf1 FBgn0020416 FBtr0080860 3 1 1 101 2L 16445979 16446069 GAACTCCACTTGGTACTTCG 58 16446133 16446151 TCCTCGGGATTTCGTAGTG 58 NA Drosophila melanogaster 61 CG13244 FBgn0032577 FBtr0080792 2 1 1 100 2L 15916998 15917126 AAGTTTGCACGAGTTCTTGG 59 15917189 15917207 TAGTGACAGTGCAGTAGGC 59 NA Drosophila melanogaster 61 CG11864 FBgn0028944 FBtr0080784 2 1 1 100 2L 15613065 15613136 ATGATGCATTTGCCGACAG 59 15612983 15613002 ATCCATTTCAGTAGCTGGCT 59 NA Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752,FBtr0300848 2 2 2 80 2L 15555017 15578890 TATTATTGCACAAGACCTGTGG 58 15578927 15578949 ATACTCGGACTAGAATGATTCCG 59 NA InUTR Drosophila melanogaster 61 CG15256 FBgn0028880 FBtr0300847 3 1 1 88 2L 15550614 15550784 CGTTCAACATGGATGATCCC 59 15550834 15550853 GTATTGCCTTGTGTAGCTCG 59 NA Drosophila melanogaster 61 CG15260 FBgn0028850 FBtr0300846 1 1 1 60 2L 15291637 15291656 CCAATATGATAGTCGTGCCC 58 15291596 15291615 AATTCCTTTCGCTGGTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3975 FBgn0027559 FBtr0080713 3 1 1 60 2L 15256212 15256230 ATCGATTTCGATCGCTGTG 58 15256170 15256191 TGTAGGACAGTTTGTACTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vas FBgn0003970 FBtr0080701 2 1 1 81 2L 15073365 15073383 GCTTGCTCTGATGTGAAGC 59 15073424 15073504 GCTCGGAAAGGATTTCTATTAGC 59 NA Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 3 2 2 80 2L 15049119 15049137 TCGTATGGACACCACTTCG 59 15049001 15049077 TCTTGGAACTCCTTACTCCTG 58 NA Drosophila melanogaster 61 CG33307 FBgn0053307 FBtr0080565 3 1 1 80 2L 13841023 13841103 TCGAAGAGTTCAAGGACTCTC 59 13840963 13840985 GGAGTGTCTTATATTGCAAGTCG 59 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942,FBtr0080536 2 2 2 80 2L 13791524 13791542 CAAGGAGGAGCTCGATGAG 59 13791586 13791673 TTTAAGTTGTCATGGCCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG16850 FBgn0032527 FBtr0080505 1 1 1 76 2L 13476377 13476395 AAGATGCAGATATGCGCCT 59 13476982 13477000 GCATCCTGCTGATAGTGTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 3 1 1 173 2L 13457862 13459929 AATCGATCATTCGTTTGGCC 59 13460062 13460083 CCAATAGAGCTCTTAGTTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Pk34A FBgn0028410 FBtr0080432 2 1 1 122 2L 13158819 13158840 TGCCTTGCTAGATTTATTGGAG 59 13158983 13159002 AATGATGAGTGGAACTTGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ACXA FBgn0040510 FBtr0080415 3 1 1 80 2L 12921208 12921279 ATTTGAAGGCCAGATGTAAGG 58 12921318 12921339 TAAGGGAACTGATCATCAAACG 58 NA Drosophila melanogaster 61 ACXB FBgn0040509 FBtr0080414 2 1 1 89 2L 12920285 12920375 CATCCGAATTGGAACAGGT 57 12920425 12920446 CAAACGTGGTCATTATAAAGGC 58 NA Drosophila melanogaster 61 CG6712 FBgn0032408 FBtr0080364 1 1 1 60 2L 12095584 12095602 GGACATAAAGCGCGATCAC 59 12095542 12095561 ATTGTTCAGGATCACTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 prd FBgn0003145 FBtr0080298 2 1 2 84 2L 12085079 12085472 ACCATGCAAGACATGAACAG 58 12085014 12085032 TATTGTTGGGCAAAGGACG 58 NA Drosophila melanogaster 61 l(2)01810 FBgn0010497 FBtr0080292 3 1 1 80 2L 12027807 12031899 TAAGCCTATCGAGGTATTTCGT 59 12031940 12031958 TGTAGGCATTCAGGATGGC 59 NA Drosophila melanogaster 61 dgt2 FBgn0032390 FBtr0080285 3 1 1 127 2L 11990198 11990216 ATTGGAAGTTATGCGCGAC 59 11990364 11990382 GACAATTTGGTACGCACCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 3 3 3 154 2L 11524691 11524710 TGGAGCCACCTATTATCCAC 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 CG14929 FBgn0032365 FBtr0100456 3 1 1 97 2L 11520285 11520305 GGAGGAAATTGATACCAATGC 57 11520462 11520480 GTCACAAAGAAACCACGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 salm FBgn0004579 FBtr0089913 3 1 1 110 2L 11445109 11445128 GGATAATCACCAGGAGACCA 58 11440242 11445036 CTACCGATGTCTTTGTCGG 58 NA Drosophila melanogaster 61 CG17107 FBgn0032281 FBtr0080107 1 1 1 262 2L 10682017 10682035 TCTAATCTTCGCCCTGGTG 59 10682261 10682279 ATCCATGTCTGCCATGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7384 FBgn0032262 FBtr0080135 3 1 1 100 2L 10509778 10509797 TCTACAGTATCCGTGGTCAG 58 10509635 10509715 TTGATGTGTTCTGTGCTCG 58 NA Drosophila melanogaster 61 dpr19 FBgn0032233 FBtr0080004 2 1 1 91 2L 10377867 10377886 CAACACTCGAGTTATTGCAC 57 10377940 10378026 TACGTATCCAGGAAACCGT 58 NA Drosophila melanogaster 61 rho-5 FBgn0041723 FBtr0089855 3 1 1 92 2L 10369521 10369600 GTGCTCTCAGATATCGTGC 58 10369447 10369467 GAAGTGAGCAATCGGTATAGC 59 NA Drosophila melanogaster 61 CG5385 FBgn0032215 FBtr0080062 1 1 1 168 2L 10312031 10312052 AGTAATGATTCAGGAACAGCAG 58 10311770 10311902 TTGAGGGTTCACCATCGAG 59 NA Drosophila melanogaster 61 Pros35 FBgn0250843 FBtr0079948 2 1 1 88 2L 10222064 10222083 ATGAAATCATCCGTCACGGA 59 10222133 10222210 AGTGATGTCATACTGACCGG 59 NA Drosophila melanogaster 61 CG4709 FBgn0032169 FBtr0079884 3 1 1 131 2L 9954523 9954602 TACGAAGCACAATTGCTCG 59 9954697 9954715 TTCATCTCCTGATTCCCGG 58 NA Drosophila melanogaster 61 lectin-30A FBgn0040097 FBtr0079816 3 1 1 60 2L 9254775 9254793 GGCTTCTCGTGATGTTCTC 58 9254733 9254752 AGCCACTTGATCAATTAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SoxN FBgn0029123 FBtr0079733 1 1 1 60 2L 8827499 8827517 AATGGCTACATGATGCACG 58 8827539 8827559 CCATGTAGGAGGTCTGATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13397 FBgn0014417 FBtr0079711 2 1 1 85 2L 8411345 8411363 GTAGAGTAATCGGCGAACG 58 8411199 8411298 CATGCTAATCTGAAAGCTTCG 57 NA Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079634,FBtr0079633 2 2 2 60 2L 8212304 8212324 ATATCTTCTGTGACAACTGCC 58 8212264 8212285 TAGTAGCGCATGTAGATGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8451 FBgn0031998 FBtr0079637 2 1 1 81 2L 8202397 8202475 TGGATGAGATTCTGTTTCTGC 58 8202278 8202296 ACATGGAGATTAATGCCCG 57 NA Drosophila melanogaster 61 CG34134 FBgn0083970 FBtr0110894 3 1 1 66 2L 8190641 8190661 GATATAATCGCATCCAGTCGA 57 8190595 8190613 GGCATTGGATTGTTCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbsn-5 FBgn0261064 FBtr0079581 1 1 1 80 2L 8161364 8161382 CATGGCAGCTAACCAATCC 59 8161424 8161509 AGAGATTGAAGATCAGACCCT 58 NA Drosophila melanogaster 61 CG7102 FBgn0031961 FBtr0079559 3 1 1 80 2L 7886467 7886549 GTTTACACCGCAAAGTTGG 57 7886405 7886423 CTCAACCACACCGATATCC 57 NA Drosophila melanogaster 61 CG13793 FBgn0031935 FBtr0302518 2 1 1 81 2L 7718794 7718815 CTTTACCTTGGAGTTGTGAAGG 59 7718670 7718758 GCTATTGTCGCATTACATATACTCC 60 NA Drosophila melanogaster 61 CG13776 FBgn0031880 FBtr0079353 1 1 2 80 2L 7013511 7013530 AATCTGTTCAAAGGATCCGT 57 7013570 7013661 GAAGCATTCCATATAAACCTCC 57 NA Drosophila melanogaster 61 wee FBgn0011737 FBtr0079371 2 1 1 129 2L 6912051 6912069 GTTGACTCCAAGAGCAAGC 59 6911844 6911959 GAAGATTGACTCGTTGCTCG 59 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 2 3 3 80 2L 6770388 6770406 TCATCGAATTCTCCAGCCA 58 6770262 6770347 GTTTGTTATCTGGTGTCTTGGT 59 NA Drosophila melanogaster 61 CG11221 FBgn0031855 FBtr0079303 2 1 1 257 2L 6743021 6753949 GCACTATCGAGAAACGCTC 58 6754169 6754188 GAATGAGATGGATCTGTCCG 58 NA DesignRelaxed Drosophila melanogaster 61 Oatp26F FBgn0051634 FBtr0079327 1 1 1 83 2L 6625759 6625841 TACACTGAGATGCGTTCAGG 59 6625695 6625713 GGTATGGTGCCCAGTAGTC 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 3 2 2 250 2L 6528793 6528811 CTTCAACGAGATCGAGGAG 57 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9498 FBgn0031801 FBtr0079282 3 1 1 144 2L 6350470 6350488 TCGTGTTCAGTGACCTCAC 59 6350280 6350362 ATAGCGGGATCCTTCTTGG 59 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251,FBtr0079250 3 2 2 80 2L 6344882 6344904 GAGTATTGTACTGACGAGAAGGA 59 6344941 6345047 CTGGTATTTCTCCTTTCCTTCG 58 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 1 2 2 182 2L 6008499 6008769 CTGTGCATGCAACAGATCC 59 6008335 6008355 GATCAGTAGTGCATACAGCAG 58 NA Drosophila melanogaster 61 Vm26Ab FBgn0003980 FBtr0079171 3 1 1 74 2L 5957437 5957456 CAAGAACTACCTGTTCAGCT 57 5957493 5957511 GATCCGTAGGACTGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7277 FBgn0031713 FBtr0079128 3 1 1 60 2L 5531696 5531714 AGCACGATAACTTTGCCAG 58 5531654 5531672 GCATCCAGGATCAAATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14020 FBgn0031707 FBtr0079094 2 1 1 60 2L 5518440 5518459 GACGCAACATCAAGACTCAG 59 5518481 5518500 TTTCCGTTGGTAGAGTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 3 3 3 105 2L 5034886 5034904 GAGACATTGGTCCAAGAGG 57 5034972 5035073 CCAATAAGACCTTGACGTCC 58 NA Drosophila melanogaster 61 Gmd FBgn0031661 FBtr0079049 3 1 1 135 2L 4976862 4976880 AAACCAAGAAGCAACGTCC 59 4976642 4976763 AAATAGGAGCCATCCTGGC 59 NA Drosophila melanogaster 61 Psf2 FBgn0031599 FBtr0077461 2 1 1 172 2L 4386695 4386772 GCGCTCAAAGTTCTTTACCA 59 4386542 4386560 TGATAAAGGCGTCGATCGA 59 NA Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0290244,FBtr0112925 1 3 3 60 2L 4379757 4379776 GTTCCTCAATGGCAATGGAC 59 4379797 4379817 CAGGACCTTTATGTAGACGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31959 FBgn0051959 FBtr0077488 1 1 1 86 2L 3758912 3758992 TATCCACGCTACCAGAACAG 59 3759041 3759059 AGTACTCAGAATCGAGGCC 58 NA Drosophila melanogaster 61 cutlet FBgn0015376 FBtr0077541 3 1 1 85 2L 3709334 3709352 ACCATGACAAACACGTCTG 58 3709204 3709288 TGCGTTAGTCTTTCATAATCCC 58 NA Drosophila melanogaster 61 CG15404 FBgn0031512 FBtr0077578 3 1 1 86 2L 3174169 3174190 AACTGGGTACTTACATGTCCTG 59 3174234 3174320 GGGCAATCTGAACAAATTTAGC 58 NA Drosophila melanogaster 61 robl22E FBgn0028570 FBtr0077800 2 1 1 62 2L 2290590 2290608 GGAGGAACTATTGAAGCGC 58 2290546 2290564 TTGTCCACCACAACTATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17242 FBgn0250841 FBtr0077803 1 1 1 60 2L 2268984 2269004 GGCTTCCGTTCAAATAAACGA 59 2268944 2268967 GATATCTTCGCTGTATATCACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31668 FBgn0051668 FBtr0113412 1 1 1 80 2L 2205066 2205143 GTTATTTATACTGTCTTGGGCGG 59 2205008 2205028 AACGGAAGCAAACATGATCAC 59 NA Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 1 2 2 124 2L 2158564 2158582 TCAAGCTGGAGAATGGCTC 59 2158396 2158478 GCGAATGAGTGGATAACAGTC 59 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077830,FBtr0077831 1 2 2 83 2L 2153463 2153481 TACGCCCAATCCTAACGAG 59 2153526 2153610 GGCTCAAAGAACAAGCTTCTC 59 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925,FBtr0077924 3 2 2 69 2L 1344751 1344770 TTCGACAAGAAGTACAACCC 57 1344802 1344820 CGTGGGTCACATAGGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tgt FBgn0031321 FBtr0077971 1 1 1 113 2L 1184242 1184328 TGATGACCCTAAGGCACAG 59 1184405 1184423 GAATCTGGCAGTTCAGCTC 58 NA Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870,FBtr0089869 2 2 2 61 X 6170573 6170593 TCTACGATGTGACCAAGTTCC 59 6170459 6170477 CTCATCCACCAGGGATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 arg FBgn0023535 FBtr0070088 3 1 1 87 X 420627 421602 CAATGGATACCATCGACCG 58 421652 421671 CTGACGTGGATCTTGTTCTG 58 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 1 2 2 90 4 279987 280082 GATGATCAGAATCCTCGCTC 58 280133 280153 GGTCTTCCATAGTAACGTTCC 58 NA Drosophila melanogaster 61 CG11771 FBgn0039252 FBtr0084748 3 1 1 97 3R 20757946 20758022 GTTACATAGTGCTGGTACCG 58 20758081 20758100 GATGGTGATGTCACTGAAGG 58 NA Drosophila melanogaster 61 CG18594 FBgn0038973 FBtr0084255 1 1 1 60 3R 18291829 18291848 TTATTCCCGACATCATCGAC 57 18291871 18291889 CCGGAAGGATAGGTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17270 FBgn0038828 FBtr0083994 1 1 1 80 3R 16642920 16643038 GCTAAATTCTATAACTCTACTGGGC 59 16642864 16642885 TCATCCAGATCCATATTTGGCT 59 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476,FBtr0113477 1 2 2 80 3R 11992918 11992939 GGCTATTTATCGGACAAGTTCG 59 11992979 11993673 GAGCCAAAGACCGAATATGG 58 NA Drosophila melanogaster 61 Sb FBgn0003319 FBtr0083250 2 1 1 164 3R 11967141 11967159 CTTGTGATTCGTCCTTCGG 58 11967285 11967397 CCAAATGCTATTGGGATTCGA 58 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 1 4 4 119 2R 18693536 18693554 AAATTGACGGTTCCTTCCA 57 18693371 18693454 ATCCTTGGAGTCTTTCTGTG 57 NA Drosophila melanogaster 61 CG34207 FBgn0085236 FBtr0112400 2 1 1 60 2R 18217107 18217125 GCAATGAACTCCGTTCCAG 59 18217065 18217084 TCAAATCCACTATCGAACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631,FBtr0086630 1 2 2 124 2R 14710833 14710852 GCATCTGTATTGCATTGGTG 57 14710665 14710746 CTTCATGGGTGGATCTTCG 58 NA Drosophila melanogaster 61 CG8441 FBgn0034086 FBtr0087247 1 1 1 98 2R 12073248 12073326 GAAGAATCCGGATAAGCCC 57 12073168 12073186 CTGCTTCCCATCACATTCC 58 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 2 6 6 154 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547877 8547966 GCTTGTTCTCACTGCTCAC 59 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025,FBtr0088024 2 3 3 86 2R 7914603 7914621 TGCTGGTCTTCTTCAACGA 59 7914479 7914555 GCGTGCAATTATCTAGTTTGC 58 NA Drosophila melanogaster 61 CG8788 FBgn0028955 FBtr0088581 1 1 1 84 2R 5027792 5028949 CTTCTACATCATGTGGCGC 59 5028995 5029015 TTTAGACACGGATCAGGACTC 59 NA InUTR Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088836 1 1 4 164 2R 3700211 3700229 AACTCTCGACTTTCGACGG 59 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 2 3 3 142 2L 21627751 21627853 GTGACTCAACAGATGCTCC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 beat-Ib FBgn0028645 FBtr0080808,FBtr0300615 2 2 2 80 2L 15906995 15908080 AAATCGATGTCGAGACTGC 58 15906933 15906953 CAAATTTGCCCGATATTGAGG 58 NA Drosophila melanogaster 61 l(2)34Fc FBgn0261534 FBtr0080640 3 1 1 213 2L 14349758 14349776 TCCGTTTGTTGGTTCTTGC 59 14349494 14349513 ATCATGAAGCCAAGGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 YL-1 FBgn0032321 FBtr0080146 1 1 1 80 2L 10970812 10970830 GTTTCGGATCAGGAAGAGG 57 10970872 10970968 AGGCTTGGTTTCCTTATAAGC 58 NA Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0078012 3 2 3 90 2L 821658 822874 CACCCAAGGTTGCTTACAG 58 822927 822946 AGCAGAAAGGATTTGATGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG12506 FBgn0031276 FBtr0078003 1 1 1 67 2L 773845 773864 CCAACAGTACCACAACTTCG 59 773894 773912 AGAGGAAACCTCTGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0078002,FBtr0078001 2 2 3 86 2L 759541 759691 GGGCAAGAAACGATATTATCGA 58 759738 759756 GATCATCGACCACGAATCG 58 NA Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 3 2 2 80 2L 357474 357493 CCTACCTCGTGTTCTACCTG 59 357182 357432 ACTTCCAGTAATCTTCCGCA 59 NA Drosophila melanogaster 61 CG14694 FBgn0037845 FBtr0082298 1 1 1 80 3R 6685245 6685327 GACCTGCTCAGATACAAGC 58 6685183 6685201 GGTCGTCCAAATCAGTGTG 58 NA Drosophila melanogaster 61 B-H2 FBgn0004854 FBtr0074429 1 1 1 253 X 17215117 17216701 AATCGCAGAACCAAATGGA 57 17216918 17216936 TGATACATGCGGTACGAGG 59 NA DesignRelaxed Drosophila melanogaster 61 Cpr64Ad FBgn0035513 FBtr0073223 1 1 1 126 3L 4215464 4215557 GGTTGTTGCAGTCCTTTCC 59 4215647 4215665 GAAGTATGGAGCAGGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299514 1 1 2 80 X 11001472 11001490 GAGTTGGAGTAACGTGACC 57 11001534 11001614 TTGTAGGTGATGTTGCCAG 57 NA Drosophila melanogaster 61 Ada FBgn0037661 FBtr0081971 1 1 1 60 3R 4891262 4891282 AGGCAAACGAGAACTATTCAC 58 4891303 4891322 GCCTTAATTGCATCGATCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18596 FBgn0038953 FBtr0084216 1 1 1 80 3R 18202915 18202989 TTCTCCTTAAGTGCGACGA 58 18203028 18203051 GTCGATGGTATTGTACAAAGACTC 59 NA Drosophila melanogaster 61 CG14022 FBgn0031700 FBtr0079080 3 1 1 84 2L 5328369 5328579 CATGTACAAGGCCTGAATCTC 58 5328305 5328323 GTTTGCTGTTCTTCACCCA 58 NA Drosophila melanogaster 61 CG30010 FBgn0050010 FBtr0088374 2 1 1 80 2R 5751456 5751528 TCATGAGGGAATGCTCTTCC 59 5751568 5751589 AACTTGAGGAAATCCTTCTCCT 59 NA InUTR Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 1 2 2 112 2L 7735203 7735334 AACTACGACGTCGATTTCG 58 7735109 7735127 TAGGACAGTCCATGTCCAG 58 NA Drosophila melanogaster 61 CG34340 FBgn0085369 FBtr0302391 2 1 1 146 2L 3673293 3678223 CCCATCCATATACCAGCTACTC 59 3678390 3678408 CATCCGGATAGTGGGTCTG 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300826,FBtr0300827,FBtr0113202,FBtr0113203,FBtr0081770 2 5 5 94 3R 3697632 3697746 GTCAATTTGTTGGAGCGAC 57 3697556 3697577 CGATCCTATAATAAACTCGTGC 57 NA Drosophila melanogaster 61 CG6462 FBgn0035663 FBtr0077039 2 1 1 60 3L 6030238 6030261 TTCTTCCTGCTACTTCTATCATCC 59 6030278 6030298 AAGTATCTAGCCAAGGCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078600,FBtr0078601 3 2 2 158 3R 2092756 2092839 CATATCATTGCTGGGCAGTC 59 2092960 2092978 TCTACCTGATCCAACTGCG 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0301395,FBtr0087703 3 6 6 96 2R 9332336 9332355 CTCATCACGAGGAATTGCAG 59 9332189 9332277 GACTCCGCCATCTGATAGG 59 NA Drosophila melanogaster 61 Ory FBgn0046323 FBtr0302286 2 1 1 106 YHet 229248 229269 GAGCTTTGATGAAGACAATGGA 59 229336 232327 AGAGATTTGGTCGTGTCGG 59 NA Drosophila melanogaster 61 meso18E FBgn0040089 FBtr0301703,FBtr0074812 1 2 2 80 X 19601633 19602201 AACCACATATCAATGAAGTCGG 58 19601574 19601592 GTAGTTCGTCTGCATCAGC 58 NA Drosophila melanogaster 61 CG34327 FBgn0085356 FBtr0112529 1 1 1 68 X 17117361 17117379 TTTGGGAAGCTTAAGCAGC 58 17117311 17117329 GAGGAACCACCAGATGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15916 FBgn0030704 FBtr0074117 1 1 1 60 X 15785084 15785105 TTTCCTATGTCAAGATCACCAG 58 15785125 15785144 TCCTTGCCCATCCAATAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 CG9281 FBgn0030672 FBtr0074057,FBtr0074056 3 2 2 96 X 15601825 15601843 AAGGTGTCCGACGATAAGG 59 15601680 15601768 TGTATCGGAAATTCACGTTCTG 59 NA Drosophila melanogaster 61 CG15029 FBgn0030619 FBtr0073998 1 1 1 95 X 15078032 15078052 GTATGTGCTGAGCAAGAACTC 59 15078109 15078849 GACGACTTAGACTCGTGCT 59 NA Drosophila melanogaster 61 Muc12Ea FBgn0052602 FBtr0073911 1 1 1 80 X 14175319 14175339 CTACAACTCTGAAGCCAACTG 59 14175380 14175619 CCGTAGTTCCACTAGTTCCC 59 NA Drosophila melanogaster 61 CG15747 FBgn0030474 FBtr0073766 3 1 1 60 X 13232592 13232610 CTGCTCCTCAATTTCAGCC 58 13232632 13232652 CGTTCCATTAGACTAGGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 1 2 2 80 X 10774599 10775517 CAAAGTGAAGCCTGTGTACAC 59 10774539 10774557 TACATGCTCAGATCCGGAC 59 NA Drosophila melanogaster 61 CG9806 FBgn0030222 FBtr0071506 2 1 1 80 X 10520262 10520281 CTTTGGAAAGCCGTATCCTG 59 10520145 10520220 CCTAAATGCTCGTGACTCTG 58 NA Drosophila melanogaster 61 CG32702 FBgn0052702 FBtr0273437 1 1 1 80 X 9458595 9458673 CTCCTATAACTACGAGCACC 57 9458534 9458553 TGGAATTTGCTTGGAAAGTG 57 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 2 3 3 80 X 9232367 9232386 ACCTGTAAGTTCTATCGCCC 59 9232241 9232326 ACAGTGATGATCGAAGGTCTC 59 NA Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035,FBtr0071034 1 2 2 164 X 6886337 6886355 CATTCAAATGCACGATGCC 58 6886121 6886211 CGGGTAAATGTGACATTTCTG 57 NA Drosophila melanogaster 61 CG3097 FBgn0029804 FBtr0070836 1 1 1 96 X 5661171 5661189 GAGATCCGCACCAAATTCC 59 5660888 5661114 GATTCTCCGAGATTCTAAGCAC 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 2 4 4 82 X 4972206 4972224 CATTCATCATTCGACCGGA 57 4972051 4972161 GCGAAATAACACCTGTTTGC 58 NA Nonspecific Drosophila melanogaster 61 CG2875 FBgn0029672 FBtr0070586 2 1 2 80 X 3467446 3467464 CAATTCCCTGCTAAATGCC 57 3467320 3467403 TTATCGGGCGTATTCTTCAG 57 NA Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818,FBtr0111025 3 3 3 104 X 2236288 2236306 TTGAAACACAATCGTCCCA 57 2236374 2236460 CTCCGCCAGAATATTCCAG 57 NA Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 1 2 2 90 X 2167972 2168066 TTGTATAGGAAACGCTTCCCA 59 2167902 2167920 AGAATTCATCGGTGTCGCT 59 NA Drosophila melanogaster 61 CR40779 FBgn0085774 FBtr0114224 1 1 1 60 U 9063635 9063655 TGGGATTGTGAACTGAAACTG 58 9063595 9063615 TAATGACTCACACTTACTGGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 1 4 4 99 U 1179119 1179137 ATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091631,FBtr0091632 3 3 3 80 4 1247368 1247455 AAACGTGTCAGATCTTTACCTG 58 1247495 1247514 AATGTCGAATTTCGCCATCC 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300885,FBtr0300886,FBtr0300882,FBtr0300884 3 5 5 80 4 881003 881079 CGCCAAAGTTGATGTACCC 59 880941 880962 ATTCGGACATAGTCCTTTACCT 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377d FBgn0083048 FBtr0113595 2 1 1 60 3R 26032934 26032955 TAGATTAACTGCCGCTAATCAC 58 26032895 26032913 TAATGCAGTAGCCGTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-U1554 FBgn0086060 FBtr0114336 2 1 1 65 3R 22630249 22630272 GAGCCAGCGTAGATATTATATCAC 58 22630295 22630314 TATGGTTATGCCTCTGGACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085841 2 1 4 135 3R 27574767 27574941 AATATCAGAAACGCACTCCCA 59 27575038 27575056 GTTCCTCGAGTGCTAGACC 59 NA Drosophila melanogaster 61 CecA2 FBgn0000277 FBtr0085614 1 1 1 99 3R 26038055 26038131 AATCGAACGTGTTGGTCAG 58 26038194 26038212 TGGTTAACCTCGAGCAGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dr FBgn0000492 FBtr0085441 3 1 1 299 3R 25383377 25383396 GCAATCCACGATACTTTCCC 59 25389964 25389983 AACTTCTTCTCCAGCGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cpsf100 FBgn0027873 FBtr0085358,FBtr0085357 3 2 2 60 3R 24861203 24861222 TGGAAGAACAAGGAATCTGG 57 24861243 24861263 AGCTCACATTGTTAAGAAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12879 FBgn0039540 FBtr0085218 3 1 1 97 3R 23520155 23520931 GGAAGAAGTGTGACCATAGC 58 23520988 23521009 GATGAGATCCCTAAGTTTGGAG 58 NA Drosophila melanogaster 61 CG17189 FBgn0039485 FBtr0085105 2 1 1 98 3R 22928106 22928189 GTCATGGAAATAGATGATCTGGAC 59 22928246 22928264 TACCTTCACGGATGTCACG 59 NA Drosophila melanogaster 61 CG31300 FBgn0051300 FBtr0084824 2 1 1 95 3R 21109889 21109907 GGTTGCTCAGGAAGAACTC 58 21109965 21110045 TTTAGGAAGTCAGGTTGCTC 57 NA Drosophila melanogaster 61 CycB3 FBgn0015625 FBtr0084728 3 1 1 60 3R 20694865 20694883 CCTGGCTCGATACATCCTG 59 20694823 20694843 GTCACTGAACGAAATATTGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10208 FBgn0039118 FBtr0084461 1 1 1 103 3R 19599534 19599624 CGAAGGAGGAGTATGATAATAAACG 59 19599455 19599473 CTCTTGCATTGTCCAGGTG 58 NA Drosophila melanogaster 61 CG13842 FBgn0039009 FBtr0084331 3 1 1 80 3R 18531224 18531312 CCCTAAGAATGAATTTGGTACTCC 59 18531167 18531187 TATTGGTTGCTCAGATTGACG 58 NA Drosophila melanogaster 61 RhoGAP93B FBgn0038853 FBtr0084036 3 1 1 80 3R 16910192 16910273 CACTATCAGAGCATGTACTCC 57 16910132 16910150 CTACTTCATCCACATCCGC 58 NA Drosophila melanogaster 61 CG4000 FBgn0038820 FBtr0083935 3 1 1 73 3R 16503007 16503025 ATCGGAAACTAGCTCTCCA 57 16502890 16502909 TCCTCCCAGTAACTGATAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 2 4 4 81 3R 15444447 15444530 CATGAACACAGAGCTTAACTGG 59 15444387 15444407 CACGGAGCCAATAAAGAACAG 59 NA Drosophila melanogaster 61 sds22 FBgn0028992 FBtr0083436 3 1 1 225 3R 13217389 13217411 AGGAGTATACAGTCATCTTGGAC 59 13217669 13217687 CTTCTGGTTCGTTCATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sds22 FBgn0028992 FBtr0083436 1 1 1 224 3R 13217390 13217411 GGAGTATACAGTCATCTTGGAC 57 13217669 13217687 CTTCTGGTTCGTTCATCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0112629 2 1 2 86 3R 10246554 10246573 CACTTATTGTGGATGAGCCC 58 10246622 10246709 TCTCCTTGCTCATGTCTCC 58 NA Drosophila melanogaster 61 CG9269 FBgn0038161 FBtr0082794 3 1 1 60 3R 9442012 9442030 CCTACGGCAATCTGTATGG 57 9442054 9442072 GGACGACCATAATATCCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 3 3 3 92 3R 8825163 8825181 ATGGCCATTGAGAACATGC 58 8825234 8825313 GAAATATAGCGTAATTGCACGC 59 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 3 2 2 80 3R 8484656 8484733 TCCTGTGATTAAGTCATACGC 58 8484773 8484793 ATGCCCAGACTAATCTTTGAG 57 NA Drosophila melanogaster 61 CG5641 FBgn0038046 FBtr0082594 2 1 1 124 3R 8254665 8254683 GTAACCAGGACCTGAGTCC 59 8254498 8254579 CTCCAGTTGACAAGTTGTCAG 59 NA Drosophila melanogaster 61 GstD5 FBgn0010041 FBtr0082572 1 1 1 60 3R 8202058 8202076 CGGATGGGAAGAGAACTGG 59 8202099 8202118 CTGACGGGCATCAAATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp70Aa FBgn0013275 FBtr0082512 1 1 1 60 3R 7780501 7780520 AACATCACGATCAAGAACGA 57 7780460 7780478 TCACCATGCGATCAATCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 3 4 4 83 3R 7264083 7264160 CCAGAGTATCCTCAAGGAGG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 CG31441 FBgn0051441 FBtr0082355 2 1 1 143 3R 7062928 7062946 CAGCAGTAAAGTGGTCCAC 58 7063053 7063130 ATCTCGCAGTGGTACTTCC 59 NA Drosophila melanogaster 61 CG4073 FBgn0037827 FBtr0082269 3 1 1 60 3R 6541241 6541260 ATCTTCATGATCGTCCTCAC 57 6541280 6541301 CAATCAAGTAGATCGAAACGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6293 FBgn0037807 FBtr0082240 1 1 1 117 3R 6135706 6135726 AGTACGTAACTCCATTGACCA 58 6135409 6135627 ATTCCAGTGGTTCCCACAG 59 NA Drosophila melanogaster 61 CG12811 FBgn0037779 FBtr0082204 2 1 1 169 3R 5874173 5874191 AAATCGCCTTTGTTGAGGA 57 5873478 5873567 GTAATACAGTGTGGCTGGC 58 NA Drosophila melanogaster 61 betaTub85D FBgn0003889 FBtr0082046 3 1 1 124 3R 5235417 5235435 GATTCCGTCTTGGATGTGG 58 5235252 5235270 ATCTTCGAGATCAGCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 2 2 2 80 3R 5158579 5158662 TAAACAGCTATATGCCCTTTCG 58 5158520 5158538 AGGTATAGCTCACCCTTCC 57 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 1 2 2 80 3R 3612901 3612981 TAACTCTGTTTCACAGGTTCC 58 3612841 3612859 GTTAGAGGATCCGATCGGA 58 NA Drosophila melanogaster 61 pyd3 FBgn0037513 FBtr0081780 3 1 1 164 3R 3574922 3575612 GAAGAAGATCAAACGCTTGAG 57 3574778 3574799 CGTAGTAGGGATTACGATAGAG 57 NA Drosophila melanogaster 61 CG31146 FBgn0051146 FBtr0081541 1 1 1 80 3R 3492628 3492646 TCGACTGCTCCCTTATCTG 58 3492689 3492927 CTTTGAGGCTCTTCATGTGG 59 NA Drosophila melanogaster 61 wa-cup FBgn0037502 FBtr0301649 2 1 1 88 3R 3246861 3246935 AGCAGAGGATCTGTTGATGAG 59 3246984 3247003 GATTGGACTCGTACAGAGCA 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600,FBtr0081601 1 3 3 80 3R 3044763 3044781 TTTGGGAATTTCTGGTGGC 58 3044626 3044722 GTTCCACGAACGCTATTATCAG 59 NA Drosophila melanogaster 61 CG42564 FBgn0260766 FBtr0301268 3 1 1 115 3R 2201036 2201057 GAGTTGGAGGATATCCTTAGGG 59 2201133 2202119 TTGTACTTCGGCGACTGAG 59 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 2 2 2 80 3R 1699264 1701811 ATCGATCTATCAGATCTGATGCC 59 1699206 1699224 ATTGACGCTGTAGACGACC 59 NA Drosophila melanogaster 61 CG14654 FBgn0037273 FBtr0078883 2 1 1 89 3R 593945 593963 TCACAGACATTGGAGGCAG 59 593874 593892 GAAGTCCGCTGACTAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9775 FBgn0037261 FBtr0301297,FBtr0078894,FBtr0078895 1 3 3 121 3R 464834 464852 CAAATTCGAGGTGTGGCAG 59 464553 464750 GCAACAGATCTTCTACGTGG 58 NA Drosophila melanogaster 61 CG9780 FBgn0037230 FBtr0078959 2 1 1 86 3R 119077 119482 CTTGATGGACATCGTAGATGC 59 119011 119029 GTAACACGTTGCACTACGT 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-3308 FBgn0082973 FBtr0113601 1 1 1 60 3L 832619 832638 TCGCACAAATCCCTATTGAG 58 832578 832597 GCGTTCAAAGGTCTTACTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7324 FBgn0037074 FBtr0078404 2 1 1 80 3L 21333039 21333057 TTACGGAACTGACACCCTG 59 21332913 21332998 TTCCCTTCTTATCAGTAAGCCT 58 NA Drosophila melanogaster 61 CG34258 FBgn0085287 FBtr0112452 2 1 1 87 3L 19945010 19945028 TTTGCTTGGCTCTCAAGTG 58 19944884 19944961 ATTTCATGATCGGCTGAAGAG 58 NA Drosophila melanogaster 61 Chd3 FBgn0023395 FBtr0074998 3 1 1 60 3L 19440900 19440921 TATCAATCATAGTGAGGAGCCC 59 19440942 19440960 CAACTCACGCCATTTCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Max FBgn0017578 FBtr0075018 3 1 1 60 3L 19256210 19256231 AAGACATCGAAGAGATCAAGAG 57 19256106 19256189 TCCAGTGCTTGTATCTGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG7484 FBgn0036745 FBtr0075184 3 1 1 178 3L 17647989 17648324 GGATACCATCAAGCCTCAG 57 17648466 17648484 ATTTGATCTGCAGGTTGGG 58 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0075202,FBtr0075203 2 2 4 92 3L 17591983 17592001 TTTATCGACGATGCACTGC 58 17591557 17591928 CGTAGAATCATCGGCTATGC 58 NA Drosophila melanogaster 61 beg FBgn0036691 FBtr0075278 3 1 1 60 3L 17029451 17029469 AATGGTGTCTGGACAAAGG 57 17029493 17029511 GGATACATGTAGTTGGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34249 FBgn0085278 FBtr0112443 1 1 1 82 3L 16354861 16354879 GACCATCAAGGCCAAAGAC 58 16354797 16354815 GAGATGCCACAATGCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13045 FBgn0036596 FBtr0075472 1 1 1 60 3L 16283390 16283409 GTCACCACCTCATCATTCTC 58 16283349 16283367 GCTAAATGCTACAGGAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13454 FBgn0036503 FBtr0075603 3 1 1 60 3L 15509891 15509911 CAACAGAGATGTATCTCCTGG 57 15509851 15509869 CATCCGAAGGATTTCCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(3)70Da FBgn0013563 FBtr0075777 1 1 1 80 3L 14065576 14065871 GGAGATCATAGAACTTAGCACTG 58 14065910 14065929 AGGATCTGCGTTGAATTCAC 58 NA Drosophila melanogaster 61 CG10748 FBgn0036327 FBtr0075900 2 1 1 60 3L 12964544 12964563 TGGAATTGGGAAAGGATGGT 59 12964503 12964521 TCGTAGTCACTCATCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP68F FBgn0036257 FBtr0075997 1 1 1 84 3L 12134440 12134458 TGATGATACCGAGCTGCTG 59 12134569 12134644 AAGTTCTGGATCTTCGGCC 59 NA Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 2 2 2 60 3L 11513424 11513443 CTATTCAATGCCACCAAGTG 57 11513302 11513401 GCACAACATATCTGGCTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 3 3 3 89 3L 9888967 9889066 ATTGCTTCGGATCATGGTG 58 9888896 9888914 GAAATAGTAGGCGGACCTG 57 NA Drosophila melanogaster 61 Taf2 FBgn0011836 FBtr0076361 1 1 1 80 3L 9878986 9879004 TTAACACCTGTGGTCTCCG 59 9878864 9878942 TAGCACAAGTTTCGCATCC 58 NA Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0302548 2 1 5 83 3L 7359199 7359270 AAACTACAGACGCTGAAGG 57 7359134 7359154 CTTTGGTACTCTCAACCTCTG 58 NA Drosophila melanogaster 61 sgl FBgn0261445 FBtr0076938 1 1 1 284 3L 6955049 6957514 AAGTTGCCCATTTACGAGC 58 6954300 6954318 TATGTGCATGATGCTCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10144 FBgn0035704 FBtr0076986 1 1 1 81 3L 6488110 6488196 TCGAAGATCTTGATGATGCC 57 6488048 6488066 TCAAATTCACTGAGCACCG 58 NA Drosophila melanogaster 61 Sfp65A FBgn0259969 FBtr0300314 3 1 1 60 3L 6343463 6343481 TCAGAAAGATGACAGTGCC 57 6343503 6343523 GGTGTTTACCGTTATAGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 3 2 2 80 3L 4861671 4861749 AGAAGATATCTCACATGCAGAC 57 4861789 4861808 TATCCAAATCGTATCGGTGG 57 NA Drosophila melanogaster 61 Gr64b FBgn0045478 FBtr0073195 2 1 1 81 3L 4029938 4030008 TGGTCCATAGAGGTTCAGC 58 4030052 4030071 TGAGGTAGAAGAATCCGCTG 59 NA Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160,FBtr0073161 3 2 2 111 3L 3905503 3905524 GATTACCGTGTTGATATTGCTC 57 3905667 3905686 GAATGAGCTTGAATACCAGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14960 FBgn0035428 FBtr0073051 1 1 1 103 3L 3271267 3274052 AGCCCTCATTATGTTTCTCAC 58 3274117 3274135 TTATCTTGGCTGCAAAGGC 59 NA InUTR Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 3 3 3 111 3L 3168164 3168182 GCACATGATCTGTCCATCG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG2083 FBgn0035376 FBtr0289987 2 1 1 86 3L 2792159 2792240 GGTCACAGATGCATAGCTG 58 2792091 2792109 CTTGTAAGCGTTATCCGCC 59 NA Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 2 2 2 82 3L 2662873 2662893 CACTGATTGGGATACGATGTG 59 2662937 2663011 CATAGGTCAGGTGGCACTC 59 NA Drosophila melanogaster 61 CG42245 FBgn0250911 FBtr0290341 3 1 1 107 3L 2632113 2633547 CCTCCAAAGAATTAGCCGA 57 2633618 2633636 TGGTTTCAGATTGGGACTC 57 NA Nonspecific Drosophila melanogaster 61 CG16986 FBgn0035356 FBtr0072930,FBtr0302434 3 2 2 95 3L 2600875 2600893 AACTCGCAAGAAGGGACTC 59 2600950 2601031 ACGATCTTGACCTTCTGTAGG 59 NA Drosophila melanogaster 61 CG5691 FBgn0035297 FBtr0072854 3 1 1 80 3L 1962338 1962424 AATCTGGCCCAGCTAATACTC 59 1962278 1962299 CAGTTTATCGGTGAGGAATGTC 59 NA Drosophila melanogaster 61 Bgb FBgn0013753 FBtr0072758 3 1 1 60 3L 1640359 1640380 AGTCCTACTTTATCATGAACGG 57 1640400 1640419 CGTTCCAGGTCTATCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2211 FBgn0035211 FBtr0072723 1 1 1 110 3L 1334446 1334520 TGTTTCTGTTCATCAGCCG 58 1334354 1334372 CATTACGATGCAGAGCGTC 59 NA Drosophila melanogaster 61 CG42553 FBgn0260755 FBtr0301252 3 1 1 109 3L 835231 835249 CGTAAACGAGCGAAGTCTG 59 835319 835396 CATTGATACCCTGCATCTTAGC 59 NA Drosophila melanogaster 61 snoRNA:U3:54Aa FBgn0065048 FBtr0091925 1 1 1 60 2R 13031170 13031190 CTTTCACACTAGCTGAAAGCC 59 13031130 13031151 GCCGAATAGAACGATTCAACTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33393 FBgn0053393 FBtr0086385 1 1 1 60 2R 15638957 15638975 ATACATCGGTTCTCGTCCG 59 15638915 15638933 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 2 3 6 80 2R 20817806 20817880 TGCACATGAAGATCCAACG 58 20817744 20817768 ACTTAAGGAGGTAGTAGAAGAACAG 59 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 3 2 4 81 2R 20443081 20443813 CACCGATTATGCAAGAAAGAC 57 20443853 20443874 TTTCCTCTTCGGGTATTAACAG 58 NA Drosophila melanogaster 61 CG15873 FBgn0035003 FBtr0072357 3 1 1 60 2R 20317553 20317574 CGATACATGTATCACACTTGGC 59 20317461 20317479 TTCATTCGAATATGGGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 mr FBgn0002791 FBtr0072156 1 1 1 80 2R 19860959 19861052 CTGGAAACTTGGCTATCGG 58 19861092 19861114 GCTTATGCTATCCTTAGACTTCC 58 NA Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 3 2 2 134 2R 19576224 19576466 GGGATGTAAACACATTCAACG 57 19576561 19576580 TGTAGAACATGTTCGATCCC 57 NA Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 3 2 2 60 2R 17556971 17557048 GCAAGTCGAACAAATAATGTCC 58 17556932 17556952 CAAGTCTTGAATTTCCTTCGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42363 FBgn0259709 FBtr0299962 1 1 1 134 2R 17552557 17552575 TGAGGAAACTTGTACCCGA 58 17552726 17552744 TTCCTCGGTTTCATTTCCA 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG9754 FBgn0034617 FBtr0071615 1 1 1 60 2R 17198909 17198929 CATCGGTCAAATAAACACCAG 57 17198869 17198887 CCGACGAACTGTTACTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Xbp1 FBgn0021872 FBtr0300236 3 1 1 88 2R 17031625 17031710 GAGAAAGTGCAAAGAAAGAAGC 58 17031759 17031777 TAGTCCATCTCCTCCATGC 58 NA Nonspecific Drosophila melanogaster 61 CG33785 FBgn0061362 FBtr0091786 3 1 1 117 2R 16531175 16531194 GATTATCGAGGAGGACACCA 58 16531002 16531095 GTGATCCACCTCCTTGAGG 59 NA Nonspecific Drosophila melanogaster 61 CG34198 FBgn0085227 FBtr0112391 3 1 1 126 2R 15570407 15570425 ACCGGATTACAACCAATCG 57 15570299 15570317 TGTTATCCTTGGGAGGAGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 1 3 3 89 2R 15280206 15280224 ACTATTGTGAGCGCTGAGG 59 15280075 15280156 GCTGAAATCGTATTCATCCTCG 59 NA Drosophila melanogaster 61 CG18190 FBgn0034403 FBtr0273238 1 1 1 73 2R 14740172 14740190 GTGAACAACATGGTCCACG 59 14740057 14740075 ATCATCTGGCAGTAGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34005 FBgn0054005 FBtr0300216 1 1 1 63 2R 13936051 13936125 GGCTAAGTTACAGTTGGCG 58 13936152 13936170 GATTAAAGCCTGCTCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6385 FBgn0034276 FBtr0089560 2 1 1 149 2R 13642248 13642319 AGTACCACGATCTCATCGG 58 13642117 13642135 GATCCCTGTTGGTATTGGC 58 NA Drosophila melanogaster 61 Fen1 FBgn0025832 FBtr0087075 3 1 1 77 2R 12742770 12742788 GCGAAAGTGAGATGAAGCA 58 12742649 12742667 CGATGAGGAACTGGTACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 2 1 1 265 2R 9725537 9725996 TCTCCGAATTTGGCGAGAG 59 9726225 9726243 CATGTTGCCGTAGTCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6209 FBgn0033862 FBtr0087651 1 1 1 60 2R 9550921 9550939 ACCGATTGTTCCTAAAGCC 57 9550879 9550897 GGTTGTCCCAAGTAAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 3 2 2 96 2R 8828668 8828757 ACAGTTGAGAAATCCGAGGG 59 8828591 8828609 TGAGATTTAGGCCCTGCAG 59 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860,FBtr0087858,FBtr0087859 1 3 3 60 2R 8647693 8647711 TTCGTGATCAACAACCCAG 58 8647651 8647669 CGAACACGATGTAGGTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8888 FBgn0033679 FBtr0088022 3 1 1 86 2R 7964799 7966813 TCGATAACAATATGCGCCG 58 7964731 7964749 GAATCTCGTGCGACTTCTG 58 NA Drosophila melanogaster 61 CG34229 FBgn0259832 FBtr0112422 2 1 1 170 2R 7729260 7729361 TGAAGCAGTTTATGCTGCG 59 7729495 7729513 GAAGGAGCATCTTGATGGC 58 NA DesignRelaxed Drosophila melanogaster 61 Sobp FBgn0033654 FBtr0088064 3 1 1 62 2R 7717930 7725408 AGATAAAGGAATTCGCGCAC 59 7717887 7717905 CACCCTCGAATCCATACCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG34054 FBgn0054054 FBtr0100109 2 1 1 90 2R 7297500 7297602 TAATACTTGCTGGCCAGTC 57 7297428 7297447 GTGGAGCTTACTACATTCGG 58 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562,FBtr0088561 3 3 3 80 2R 4967863 4967881 ATGTACTGCTGCATCTGTG 57 4967922 4967996 AGCACTCATAGTTGGTTATGTC 58 NA Drosophila melanogaster 61 CG11210 FBgn0033259 FBtr0088781 1 1 1 91 2R 3987898 3987916 TATACGTAAGGAACGCCGA 58 3987968 3988047 TGGTTTAACCATGAGAGTATCC 57 NA Drosophila melanogaster 61 CG30379 FBgn0050379 FBtr0088851 1 1 1 60 2R 3828676 3828695 TATACGCATGGGATTCGTCC 59 3828718 3828787 CGTGAACAGTAATTGGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086116 2 2 3 135 2R 2556822 2556840 TATCCTGTTGCAGTGGAGG 59 2556939 2557014 ATGTCCTGCATGGAGTAGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Dpit47 FBgn0033083 FBtr0086146 3 1 1 124 2R 2548741 2548818 AACAAGATGAAGAAGCTCGAG 58 2548637 2548655 TCGTCAAACTTAATGGCGC 59 NA Nonspecific Drosophila melanogaster 61 CG9259 FBgn0032913 FBtr0081464 3 1 1 60 2L 21090152 21090170 CCGGAACATATGAGGATGG 57 21090194 21090212 TGATGAACTCCTTGAGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9987 FBgn0032781 FBtr0081205 2 1 1 86 2L 19432001 19432019 TACGTGCTAACTGGAACGG 60 19432129 19432147 TTTGGCTCGAGATAGTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Mst35Bb FBgn0013301 FBtr0080681 2 1 1 186 2L 14882384 14882402 AAGCACTGTGACTTGAAGC 58 14882167 14882186 TGGACTTAACTGCATCAGAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271 2 1 2 150 2L 11586620 11586702 CATAGATAATCAAGAGCAACCTCC 59 11586493 11586512 CGAGTCCAACAACTGTTCAG 59 NA InUTR Drosophila melanogaster 61 Art8 FBgn0032329 FBtr0080162 3 1 1 109 2L 11010888 11010962 AACTTGGAGATCCACGAGC 59 11010797 11010818 ACATCCATTACGATCTTGTCCT 59 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 2 1 1 86 2L 10704073 10704149 GCATAATGAAGACAGCTGTGG 59 10704197 10704215 CTAGAGATTGATCGGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9483 FBgn0032072 FBtr0079738 2 1 1 60 2L 8866959 8866980 ATACGGACTTAGTGTGATCCTG 60 8866995 8867019 GTAACCTATAATGATCCACTGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 2 2 4 94 2L 8428059 8430291 CAAATTGAGGTGGATCTCGC 59 8430348 8430366 TATTCGCATGTAACGGGCA 59 NA Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 2 2 2 82 2L 8200024 8200113 CTTTATGCTGGCCACTATAACC 59 8200153 8200174 AGCTATTGAAGACAAACTGCTG 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331,FBtr0079492 1 3 3 80 2L 7806707 7806727 AGATAGTTCACTACACCTCCA 57 7806514 7806668 GGTAGATTATTGCATACGAACC 57 NA Drosophila melanogaster 61 CG14538 FBgn0031943 FBtr0079484 3 1 1 60 2L 7756872 7756891 CAGCTAGATCCTGAGTACGC 59 7756913 7756932 ACTTGCACTTGACTAGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 1 5 5 131 2L 6924280 6924300 GGTTATCATGTACGACCAGGA 59 6924393 6924695 TTGATTTCGACCTGCTTGC 59 NA Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 3 2 2 92 2L 6674206 6674225 ACTGAAACTAGTGGAACCAC 57 6674356 6674375 AGTCGATCCAATACCGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 1 3 3 105 2L 5947159 5947245 GTCTGGAGGACAAATTCCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 CG7239 FBgn0031740 FBtr0079139 1 1 1 264 2L 5802457 5802475 AGCAGGACTTAGGCATGTG 59 5802703 5802780 TTGACTTGCCTGAACTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14014 FBgn0031718 FBtr0114511 2 1 1 60 2L 5550525 5550545 GCCAGTTGTATCTGATGAACG 59 5550485 5550504 ATTGCACTTGTAGTCCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31915 FBgn0051915 FBtr0079099 3 1 1 96 2L 5528436 5528527 ATAGCAATTTGGTTGCGCT 59 5528585 5528605 TTACGCTGTGATAAAGATCCC 58 NA Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079011 3 1 2 206 2L 5055663 5055730 CGAGGACACCAATCTCTGG 59 5055898 5055918 TAGACCTAAGTACTAAGCGGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG17012 FBgn0031406 FBtr0077804 2 1 1 60 2L 2254478 2254498 TGTGTTCAATGAGGACATCTG 58 2254438 2254456 GGAATCTCCATAACAGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31933 FBgn0051933 FBtr0077896 1 1 1 60 2L 1821792 1821811 CTGAAGAATTGTGGAAGCTG 57 1821751 1821769 GGTAAGAAGAGGCTAACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 2 2 2 80 2L 1016072 1016153 GTTCGTCAAGAACCCAATCG 59 1016011 1016031 CCCTGCATGTGTAGTATTTGC 59 NA Drosophila melanogaster 61 Pph13 FBgn0023489 FBtr0078070 2 1 1 85 2L 578020 578159 CAGCGGAGATACAGAACCA 59 578208 578226 AACACGTCCGGATAGTGTG 60 NA Drosophila melanogaster 61 ush FBgn0003963 FBtr0078063 2 1 1 80 2L 524039 524059 TGCTTAGCAGCAATACAAGAG 58 525431 536037 TCAGATCTTTGGAATCTCTGC 57 NA Drosophila melanogaster 61 CG4164 FBgn0031256 FBtr0078060 1 1 1 214 2L 454089 454107 CAAGCACCTTGATGGACAC 59 454344 454362 TGATGGAGGATTGGTCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13692 FBgn0031254 FBtr0078057 2 1 1 80 2L 422120 422143 CTCTAATCTCTGTCAGATTTCAGC 59 422180 422254 TTAGTATTATGCTGCAGACGC 59 NA Drosophila melanogaster 61 RpLP1 FBgn0002593 FBtr0078056 3 1 1 110 2L 420050 420068 CAGTGATTAGCCACAGCAC 58 420141 420305 TTGATCTTCTCACCGGTGAC 59 NA InUTR Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113415,FBtr0078163,FBtr0078164 3 3 4 80 2L 28234 28744 GAGATATTCCTGGCGAGCT 59 28172 28193 TTAGGTCATTAACGGAATCGTC 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 2 10 10 90 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110867 111915 AATCGAAACCCTTGGAGGAG 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0301888 2 1 5 129 2L 155422 155507 AATTTAAGAGACTGCTAACGGC 59 155597 155615 GTCAGATCGGTTAAGGGCA 59 NA InUTR Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 1 1 1 60 2L 1352711 1352732 CTATTGCATCTTCGATCTGGAG 58 1352616 1352635 GGCCCTCTTATAGACATGAC 57 NA DesignNoJunction Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 1 4 4 60 2L 2769206 2769224 CTACCCGCAAATCTTCGTG 59 2769164 2769182 TGCCATTATCAGGGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077691 2 1 2 102 2L 2837259 2837277 CATGGAGAATCTGCAGCAC 59 2835534 2837195 TCCGCCAGACATATAACTCAC 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 2 4 4 223 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882297 2882315 ATTATCCGCGAAGGAGCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 3 4 4 224 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882296 2882314 GATTATCCGCGAAGGAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 1 8 10 80 2L 3500563 3500646 TTGCAACAAGACATTATCACCC 59 3500504 3500525 CAGCAAAGTTCTCTGATACTCC 58 NA Drosophila melanogaster 61 drm FBgn0024244 FBtr0077531,FBtr0077530 2 2 2 74 2L 3545742 3545760 GATCACCTATTCGTGCGAG 58 3545798 3546739 TGACTACATCTGTGCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 l(2)k16918 FBgn0021800 FBtr0077497,FBtr0077498 1 2 2 92 2L 3807049 3807143 GGAAACTAGTGTTGCTGGC 59 3807199 3807217 TGGTCGTACATGAGATGGG 58 NA Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301 2 1 2 106 2L 3916856 3916874 GACAGCTATCAAGTGCTGC 59 3915087 3916786 TCAAGTGGTCCTGACTCTC 58 NA Drosophila melanogaster 61 CG31961 FBgn0051961 FBtr0077485 1 1 2 156 2L 4187635 4187653 GCATATGATACGTGCCCAG 58 4187430 4187448 TTTGTTCAAACGCTCGAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0290071 3 1 2 82 2L 4401758 4401875 CTATAAGAAAGGAATCGCCGA 57 4401918 4401937 TGTGATCATGATTGTGTCCC 58 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 4 5 112 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473872 4473890 CCTGTGGTTGCATGTAGAG 58 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 1 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 1 5 5 86 2L 5155463 5155481 TTCTGTGAGAAGACCCTGG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 vri FBgn0016076 FBtr0300020,FBtr0079070,FBtr0079071 3 3 3 101 2L 5307902 5308028 GGCTTCTAACTTGCATCCG 59 5308093 5308111 CTTCCCGGGACATATTTGC 58 NA Drosophila melanogaster 61 CG9016 FBgn0031751 FBtr0079151,FBtr0079152 3 2 2 108 2L 5923224 5923242 ATCCAGACTGGCAGTATGG 58 5923134 5923153 GCTATTCCGGTAAGATGTGG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 1 2 3 81 2L 6110157 6110175 ATTAGTACGCGACTCGGTG 59 6110220 6113043 AGATCTTCTTGACACCGCT 58 NA Drosophila melanogaster 61 Gef26 FBgn0021873 FBtr0300038,FBtr0079249 2 2 3 195 2L 6329689 6330133 TGACTTCCGGTTCCATATCG 59 6330291 6330309 CAGGGACTGTTCAAGTTGC 59 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 3 2 2 87 2L 7797722 7798171 GACTCTACGTTCTACGTTGC 58 7797654 7797672 AGCAATCAGTGGGACTGAG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 2 3 9 92 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226522 8226540 CAATCCAGGGTGAAGTTGG 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 2 6 6 80 2L 8261677 8261754 GCTGCATACCAAAGTTCCAC 59 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 2 3 3 81 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929039 8929058 GAGTTGCCTTAGGTTTCTCG 58 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 1 4 5 80 2L 9535893 9535999 ACCACTATATCGATCACTCCC 58 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199 3 1 3 81 2L 9617775 9617795 AGATAGAAGAGCAAACGACCA 59 9617832 9621160 CGGAAATTCATACTATGGATTCTGG 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913 3 1 6 93 2L 9825634 9825652 GGTTAAGTTCGGACTGACG 58 9819323 9825309 CTTCTCGTCCAAATTTAACCAC 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 4 7 81 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 2 5 5 80 2L 10296849 10296947 GTTTCTAAAGCTAAGCTCGGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 1 2 3 160 2L 10322827 10323683 ATGATAAGGATCCCTACCGGA 59 10323873 10323891 CTTCACGGTATCGAAGGGA 58 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080030 1 1 2 80 2L 10459504 10459887 GACAAGTTGATACGATATGGCA 58 10459928 10459946 ATAGCACGATGGAGTGGAG 59 NA Drosophila melanogaster 61 CG6415 FBgn0032287 FBtr0080108 1 1 1 87 2L 10704072 10704092 GGCATAATGAAGACAGCTGTG 59 10704197 10704215 CTAGAGATTGATCGGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 2 3 3 152 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524487 11524574 ATAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462 2 1 2 87 2L 13296734 13297626 GTATCTCTTTAGCTGCTGGC 58 13297676 13297694 CTTCTCCGTATTGACCCGT 59 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0100220 1 1 3 163 2L 13384640 13384658 TGCGCTCTTATTTACAGCC 58 13384782 13384992 GCAAGTCTTCTGTAACTTAAGC 57 NA InUTR Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514,FBtr0080513 3 2 2 105 2L 13535017 13546919 CTCTTAAAGGCTGCATGGA 57 13534930 13534948 GGAACAACAGCCAAATGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 3 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068916 14068939 GGACGTTCTAGTGTATTATAGGGA 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 2 5 5 80 2L 14323471 14323547 CAGAAGCGATCGATGTTTCC 59 14323590 14323608 TACTCAAACCGTAGGAGGC 58 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 3 5 5 80 2L 14321173 14321191 ATAGGAAGAGCAGCTCCCT 59 14321234 14321317 TCGACAGTTCTGACAGACTC 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941 3 1 3 82 2L 16725939 16725957 GAAAGCTATCGCGAAGTGG 59 16724977 16725894 TGGATGTATTCGTTGTTCGG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 2 4 16 104 2L 16777431 16778401 CAAGATGCGCTATCAAATCCT 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 2 4 5 107 2L 17439291 17441812 CAATGGACTCAGATCCAGC 58 17439202 17439220 GGTCATTCTGCAATTGCTG 57 NA Drosophila melanogaster 61 CG10165 FBgn0032801 FBtr0081278,FBtr0081277 2 2 2 106 2L 19528163 19528181 TCTGATCTTTCTGGTGGCC 59 19527941 19528094 TAAGGACGTGGAATCCAGTC 59 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0081325 3 1 3 107 2L 19735628 19735779 AGAATTCTGAGCGCATGTG 58 19735539 19735557 GATAAATAGGCGCTCGTCC 58 NA Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 3 2 2 84 2L 19959683 19959761 ACATCTTCGTGTACGATGAG 57 19959808 19959826 ATTTCCAGGTCGATGATGC 58 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 1 2 2 270 2L 20349193 20349211 ATACGCCCAGAAGAACGAG 59 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0301276 1 1 3 81 2L 21138353 21138728 TAGAATCTCTTGATCAGACGACG 59 21138294 21138312 TGGTAAACCTGCTCCTGTG 59 NA Drosophila melanogaster 61 Acon FBgn0010100 FBtr0081473,FBtr0300425,FBtr0112855 2 3 3 84 2L 21172325 21172343 GTATCCACGAGACCAACCT 58 21172391 21172470 GTGGGCTGGATCTTATCGT 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 3 5 5 91 2L 21185984 21186086 ATCGTCAGTTGTCAACTGC 58 21185911 21185929 ACAATGGTCAGATCCCGAG 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081511 3 1 4 91 2L 21297159 21297178 CATGTTACGCACTAATGGCA 59 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 3 5 5 81 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 3 2 3 97 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648244 20648435 CGGGTTTCAGCATTATAAGTG 57 NA Drosophila melanogaster 61 His-Psi:CR33867 FBgn0053867 FBtr0091871 1 1 1 67 2L 21540942 21540960 TAGTGACTTTCGTGCTGTG 57 21539420 21539438 TCCTTTACCACGACCAGTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111300 2 2 5 99 2R 18621 18693 CCCTCACAGATATGCATTAAGC 59 18753 18771 CTGATTCCTCAAAGCAGCC 58 NA Drosophila melanogaster 61 Nipped-A FBgn0053554 FBtr0113467 1 1 2 80 2R 1081105 1081126 TTAGCATGTCAGGTTAATGACC 58 1075846 1081066 TAATAGCATAACGCACCTTCG 58 NA Drosophila melanogaster 61 CG30431 FBgn0050431 FBtr0085991 3 1 1 84 2R 2090813 2090831 CTCTGCAAGCAAGTAAGCC 59 2091530 2091548 GAGCTGTCTTGGAAGTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301423 1 1 7 103 2R 2611518 2612081 AAGAGGATGATGCGGATGG 59 2611433 2611454 GGTCTTAACGAATGTTATGCCA 59 NA Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 2 2 2 112 2R 2717457 2717477 CTTGGGATTATAAGGAGCGAC 58 2717551 2720150 TACTCAAAGGGCAAAGCCT 59 NA Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 1 2 2 86 2R 2864775 2864794 CATGCTCGAAATACACCAGC 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111066 2 1 59 82 2R 3219876 3225767 CTTATTGTCAATGTACCTCCCAG 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081,FBtr0111069 1 2 59 80 2R 3229659 3229678 GGATTCTATTCGTGTCACGC 59 3219875 3229616 TCTGGGAGGTACATTCACG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082 2 1 59 80 2R 3247223 3247241 TGAGGATTAGGCAGGAGGA 59 3236470 3247182 ACTTGTACCATCTATACACCGG 59 NA Drosophila melanogaster 61 Gr43a FBgn0041243 FBtr0089014,FBtr0110820 1 2 2 80 2R 3278702 3278722 AGTTACTCGTCGTAGATGCTG 59 3278580 3278660 CGGATGCAAACGATGTCAG 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 1 5 8 107 2R 3355321 3356622 CTATGCCGTTGATGTGCTG 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0088996,FBtr0300481 1 3 8 80 2R 3355978 3355996 GTTAAGGAGTTCAGGCGGA 59 3355321 3355934 CAGCACATCAACTCCACAG 58 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 3 5 6 87 2R 3522434 3522452 TTGTCTATCCGATGAGGGC 59 3522503 3522574 CTAACGCTCTCGAATTGCA 58 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 1 3 4 130 2R 3872487 3872505 GGGTGATGAGATCGACGAG 59 3870502 3872393 ACATACTCGGCCTTAACCG 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 3 2 4 168 2R 3873242 3873264 GTTGATCACGATATTAGGCACTC 59 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140 2 1 2 95 2R 4004604 4004682 CATCGATGAGCGCAAATCC 59 4004527 4004547 TGTATGGAGTCGCAAGTAGAG 59 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 1 2 2 102 2R 4279155 4279173 AACTGAGTCCATCGTCCAG 59 4279239 4281077 TTGATGGTGGGTTCATTCG 58 NA Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 1 2 2 80 2R 4352035 4352053 AGTCCCAGACCCTTAAACG 59 4352096 4352168 GCTCGAGATACCGTTTAACG 58 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301191 2 2 3 80 2R 4898915 4900536 GATGAGCTGGACTTGATACC 57 4898854 4898872 CAAGACACAGGAGATGGAC 57 NA Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 1 2 2 68 2R 4996588 4996606 TTGACTCCATGAACGAGCT 59 4996474 4996494 ACTGTTCCTTGATGTACTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 2 2 4 143 2R 5119289 5119307 TCACGTAAACCGGATACCA 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 1 3 10 81 2R 5155477 5171347 GATTCGTATTATCAGGGCGA 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299917,FBtr0299916 1 5 5 80 2R 5397498 5397732 TGGACTATCCAAGAACCCG 58 5397776 5397794 GAATGGGTATGAACTCGCG 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122 1 1 4 132 2R 5456173 5456191 AACGATTGATCGTGAACCG 58 5455872 5456081 CCGAAATATTTGGTGATCTCTGG 59 NA Drosophila melanogaster 61 CG1814 FBgn0033426 FBtr0088522 1 1 3 108 2R 5467333 5467478 AGTTCCAATCCAAGAAGCTG 58 5467547 5467567 GTGTAGTCGTAATCGAATCCG 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 cdc2rk FBgn0013435 FBtr0088430,FBtr0088429 3 2 2 85 2R 5955471 5955494 GATCTAAAGGTATCCAATCTGCTG 59 5955356 5955374 GGATTGCTAAACATGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 3 10 17 182 2R 6183478 6183497 CTTACAAGAGTCTCCAGGCA 59 6188084 6192137 TGTTCACGTCTGATCCGTC 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 2 2 26 95 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6393563 6419548 CGCGTAATACTCAGATCTTGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 3 5 5 106 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624496 6624578 CCGATGAAGGTCACCTCTG 59 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 3 3 3 132 2R 7108117 7108443 GACACTATCAGCATCGTTGAG 59 7108535 7108555 GGTTCAGGCTCATCTTATCCT 59 NA Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 3 3 3 80 2R 7174167 7174241 GCATCAATGCAGGAAATTATGG 58 7174108 7174128 GGATTCATCTGTTAAGGCAGC 59 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 2 4 4 81 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269384 7269466 CACCGTGATCAACCTTATCG 58 NA Drosophila melanogaster 61 Roc2 FBgn0044020 FBtr0302211,FBtr0088085 1 2 2 103 2R 7540579 7565721 TCAAGTTATGGATTCCTGCCT 59 7540496 7540514 GAAAGGAGTGGTTGCACTC 58 NA Drosophila melanogaster 61 Tango3 FBgn0033651 FBtr0088065 2 1 2 60 2R 7676465 7676486 TAACTTGATGGGTTATCCACTG 58 7676426 7676444 CACAAAGCAATGAGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13185 FBgn0033661 FBtr0113072 1 1 2 93 2R 7765780 7765854 CCAAAGTAACTACAGAGGCAC 58 7765707 7765728 ACCTCGATGATCTTACCTAGAG 58 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 3 2 2 87 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877124 7877144 GCTGATTTACGATACCGATGG 59 NA Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 2 2 2 88 2R 8142679 8142698 GATGACCAAGAAGCATCTGG 58 8142798 8142819 ACTTCTTAAGCATACTCTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087832,FBtr0087836 2 2 8 87 2R 8505016 8505034 GATATTCTGCGTGCTCGAG 58 8505082 8505313 CGACGTCTACCATTCTAAACAC 59 NA Drosophila melanogaster 61 sca FBgn0003326 FBtr0087855,FBtr0087856 1 2 2 99 2R 8668886 8671860 GAACCAACTCAGGGAGGAG 59 8671923 8671941 GATCTCGGAGATCGTCTGC 59 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 1 2 2 95 2R 8828667 8828756 CAGTTGAGAAATCCGAGGGA 59 8828591 8828609 TGAGATTTAGGCCCTGCAG 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 1 5 12 83 2R 9303457 9306504 AACCGCGATCTTCATTCAC 58 9303392 9303410 GATCCGTTTCGACTCTCGT 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087583 3 1 3 111 2R 10039647 10039665 GTCGGGTTGCATCAAAGTC 59 10039417 10039574 CGAAATGGTACTGGAACTCTC 58 NA Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 3 1 1 64 2R 10049061 10049079 TACCTCACCTACTGTCCGT 59 10049161 10049180 AATGATCCCAGGAAGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 1 4 4 97 2R 10059940 10059958 CTACTGGGTCACGTTTGGA 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0290035,FBtr0087527,FBtr0290034 3 3 8 105 2R 10064975 10065378 GACACCAAGTGACATACTTCC 58 10065445 10065463 CAACTTTAGGTTGGGTGCT 58 NA Drosophila melanogaster 61 CG8547 FBgn0033919 FBtr0301203,FBtr0301204 1 2 2 80 2R 10151028 10151106 CCTATACTCTGGCCCACTC 58 10150966 10150984 TGTTAATGGTGCGATTGCT 58 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 2 4 7 85 2R 10179810 10179828 CCAAGCTGTTATCCCTGGT 59 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100369 1 4 7 84 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179874 10184214 ATTGAGGAAATAGACCTCCTCC 59 NA Drosophila melanogaster 61 Tfb1 FBgn0033929 FBtr0087548,FBtr0087549,FBtr0087550 1 3 3 80 2R 10252375 10252395 ATGCTCTGGGTGAACTAAGTC 59 10252437 10252515 CGTTCGGAACAAGTTGTCC 59 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0112809,FBtr0087465,FBtr0112810 2 3 4 101 2R 10662963 10663051 CTATGTCTCAGCTCTCAACGA 59 10662882 10662900 TCTTTCTGGAGCTTCTCGG 59 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0301334,FBtr0087431,FBtr0087430 3 5 5 80 2R 10790225 10790304 CTGTCCGACAGTAATGGCA 59 10790163 10790183 ATCCAGCAGTATGGATACCAC 59 NA Drosophila melanogaster 61 row FBgn0033998 FBtr0087402 2 1 2 81 2R 11098561 11099089 CAAGAAACCTATCAACGATGC 57 11098500 11098521 AGATGATGCTATATCACGATCC 57 NA Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112517 1 1 2 107 2R 11346762 11352870 TAGTAGCTCAGCACCATCG 59 11352941 11352959 GACTTCTCCATCTCGTCCG 59 NA Nonspecific Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 2 2 5 80 2R 11773649 11773670 TAACTGACAATCAGATCCACAC 58 11773148 11773608 TGTTGTTTAGGCGTAGTCG 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231,FBtr0087232 1 2 2 106 2R 12027845 12027863 AGATGCTGGAGTTCCTTGG 59 12027933 12028013 TTTCGAGTCCAGTCACTGG 59 NA Nonspecific Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231,FBtr0087232 2 2 2 68 2R 12027883 12027901 AGACGGAAATCAGCATTGC 58 12027933 12028013 TTTCGAGTCCAGTCACTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 2 5 5 82 2R 12093318 12093420 TGAAGTGAAGAAGGCATATCGA 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 1 3 5 148 2R 12562740 12565923 GAAATCAGTACTGGATGCTCAG 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113089 3 1 4 89 2R 12649191 12649209 GACTTACTCAAAGCCGAGG 58 12648209 12648918 GAGCTCATCCTTATTCGCA 57 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 106 2R 12677130 12677224 GATCAGTACAAGCGCTCTC 58 12677294 12677312 GCCGGAGTAACTACTTCCA 58 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 2 3 4 147 2R 12747152 12747174 CGGATATGTCAAAGAGATTCTGG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100251 2 1 4 60 2R 12884222 12884243 ACTTATGCAGATGCTACAACAC 59 12884183 12884201 TTTGAAAGTTCAGCCACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114627,FBtr0114625 1 2 6 99 2R 12896437 12897013 TCATTGTGAGACCGAGGAG 58 12896356 12896374 ATTTAGCTGCATCTGTCGC 58 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 3 3 3 80 2R 12929166 12929186 ATCAAGAAGAATCCTAGCGTG 58 12929226 12929313 TTTATCATCCTGCTTGGTCAG 58 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 3 2 2 61 2R 12951497 12951518 CATACATTCTATTCGGACCACC 58 12951780 12951799 TAGAATGGCCTCCACAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086982 1 1 2 83 2R 12996711 12996729 ACTCTACCGAAATCCCAGG 58 12996776 12997460 CAATGAGATGCCGCTATCG 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 1 2 4 85 2R 13619771 13619837 GAACTATTGGTCGCTTGGT 57 13619886 13619904 AAGCTCATCACGAACAGTG 58 NA Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0113361 1 1 3 152 2R 14320264 14324104 AAGCCTACAAGTTCCAGGAG 59 14320066 14320155 CCCATTTATCCTTGGATATGTATGC 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 1 4 5 94 2R 15024321 15024463 TCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 1 5 6 80 2R 15048910 15048989 CCATTCTCAAGGTCAATGGC 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 1 10 10 80 2R 15298013 15298105 CAACAAGAGTCACTTTGTCC 57 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 3 3 19 90 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365203 GAAAGGTTGAACGTGATGGA 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 1 5 19 96 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361462 15362041 GATCCACTGTTTGTCTCTGC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 3 11 19 82 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361018 ATTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 3 3 5 80 2R 16483311 16485065 AGGACTCAGTATAAAGCCACTG 59 16485963 16485985 CTCTATATCCGCCGATATTTGGA 59 NA Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 3 1 1 99 2R 16767682 16767700 GGATTGCACGTTCTTCACG 59 16768311 16768329 CTGACCTTCGGTCATTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15661 FBgn0034605 FBtr0110814,FBtr0071624 3 2 2 91 2R 17103409 17103489 TCTACTGTGATCAGCACCT 57 17103336 17103355 CAGGATTTCCTCGGTAATCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 3 2 9 98 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399677 17399911 TCGGAAGTACTTGACGTAGC 59 NA Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 1 3 3 82 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608822 17609371 CGATGATACCTCGGAAACCT 59 NA Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 2 3 3 86 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608827 17609375 TAGGCGATGATACCTCGGA 59 NA Drosophila melanogaster 61 mei-S332 FBgn0002715 FBtr0071761 1 1 1 60 2R 18010953 18010973 ATACCAGAGGATAGAAGAGCC 58 18011056 18011074 CTAATTCCGCTGGTCTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 1 3 3 80 2R 18025742 18039164 CATCAACCACTCACGATTCTG 59 18050413 18050433 GAGACGCATACTATGTTGGTG 59 NA InUTR Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 3 3 4 83 2R 18223212 18223230 CAGCACTATGCCACAACAG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0071839 2 1 2 83 2R 18363686 18363989 TCCCGGATTGACAATATGGG 59 18363622 18363640 GTTCCTTCCACAGGCTAGG 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273317,FBtr0273316,FBtr0273314,FBtr0273318 2 4 5 92 2R 18598095 18598208 CAATGGAATAGCAAGGACCAC 59 18598262 18598280 CTCTACAATACCCGCCCTG 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 2 8 8 102 2R 18612064 18612082 AAGGGACAGAACATTCCCA 58 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 yip3 FBgn0040063 FBtr0072050,FBtr0072051 1 2 2 87 2R 19132119 19132187 ATGACCGCATTTACTGCTG 58 19132050 19132068 CGGACTAGATTTGCCACCT 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 3 2 13 90 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564635 19564653 ATCTGCGGACTGTAGAGTC 58 NA Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 2 2 2 102 2R 19571834 19571905 AAATGCACCCATTCGTGAG 58 19571970 19571989 GCAAGAACCTCTTGTATCCG 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255,FBtr0072254 2 2 2 154 2R 20043493 20044430 TCTTCAAGGATGAACCGCT 59 20044543 20044566 CCTCATAAGTCCATTTAGGAACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 2 2 2 194 2R 20487184 20487202 ATCCAGCTGAGTACAACCC 59 20486889 20486907 GGAACACGTACTTGTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 2 4 4 81 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552191 20552386 GCATAAACTCATTATTGGCCTG 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0072379 2 2 3 124 2R 20721067 20721160 CACAGTGGCGGTAATAACG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391,FBtr0072392 2 2 2 119 2R 20826341 20826359 TAAAGATCGGCCAGCTGAG 59 20826555 20826573 CGTCCTCATTGTAGTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 2 3 3 86 2R 20865281 20865299 ACAACATGTGCTTCTGTCC 58 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0072475 3 1 6 104 3L 171888 171907 GTATTCTACGACTGCCTCTG 57 171973 172073 GTGGTGTGATTACACAACAC 57 NA InUTR Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 1 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 hipk FBgn0035142 FBtr0072552,FBtr0072551 2 2 2 80 3L 571004 571087 GATTTCCACACTGTGCAGC 59 571129 571149 GATCGTGAACGTCATGTTCTC 59 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072554 1 1 2 106 3L 593652 593735 GGCTGAACTATTACCACGC 58 593805 593823 ATTTGACCAGCGCATTCAG 59 NA Drosophila melanogaster 61 CG32334 FBgn0052334 FBtr0113434 1 1 1 95 3L 1112019 1112037 ATCCGAAGACGAGGATGTG 59 1110337 1110355 AATGCAGACAGCAACAGAG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 3 3 3 81 3L 1255033 1255494 AAGGGTATCGAGGTTTGCT 58 1255539 1255557 ACTTGGCCTTACTTCCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG9134 FBgn0035199 FBtr0072661,FBtr0072660 3 2 3 157 3L 1266198 1269075 TGGTCCTGTAGCTGATTGC 59 1272984 1273004 CGTGGTATCGGCAATATTGTG 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0301465 2 1 3 198 3L 1945570 1945662 TCAAAGTTGCATCAGCGAC 59 1945335 1945353 CGACTCCTGTTACTCACGT 59 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 4 5 116 3L 2604269 2607701 AACCATCAGAAACAACGTGG 59 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 3 6 15 80 3L 3083796 3085208 TCGCCACTTATATGGTCAC 57 3085252 3085270 ATGGTGCATAGAAGTTGGG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 8 15 88 3L 3080026 3083748 CAGATACGGCTGCTATGGA 59 3083797 3084816 CTGTCGATTCATATAAGTGGCG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 3 9 15 81 3L 3083794 3084812 ACTCGCCACTTATATGAATCG 58 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 2 5 5 82 3L 3310690 3310776 CATTCCTGTCTGTGAAGATGTC 59 3310818 3310837 CAAAGCACCCAAGACTTCTG 59 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073074,FBtr0073075 2 2 2 92 3L 3375956 3375976 TGCGCGGAAAGATTTATATCG 59 3376028 3376104 GCCAACAAGCGAATCTATCTC 59 NA Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 2 2 2 83 3L 3463216 3463235 AAGACAGACTTGCCTACAGG 59 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778,FBtr0299777 3 2 2 93 3L 3504725 3504743 CTACAAGGCCGACATTAGC 58 3504797 3504902 AATATCAATGGGTAGCGATGAC 58 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431,FBtr0113430,FBtr0073187 2 3 5 96 3L 3780490 3780508 ATCGGATATCCTGCACAGC 59 3769396 3780430 CTGTTTCTTAGCGCACTGC 59 NA Drosophila melanogaster 61 CG14997 FBgn0035515 FBtr0073226,FBtr0073225 2 2 2 80 3L 4241162 4241243 CTCAATTATGGAAAGATACCTGGC 59 4241282 4241300 CTTGGGCGAGTAGATGGAG 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077172,FBtr0077175 1 2 5 180 3L 5160148 5161352 AATGTAAAGGTTACGGCTTCG 59 5156996 5157014 AGCATTGCCTCCAGATCAG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 3 4 8 95 3L 5733292 5739571 CTGATGAAGGACCTAGGGTC 59 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 2 2 2 119 3L 5755780 5755798 TTTAAGCACACGGTTCTGC 59 5755616 5755697 GAGCAGAGTCTTGAGCTCC 59 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355 3 1 2 113 3L 6118570 6118589 AGGACGTTATGAGACAAGCT 58 6118412 6118494 GGATGTTGTGTTGACTCGC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 6 6 92 3L 6584021 6584039 TGTGAATCCTCCCAAACGT 59 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 2 6 11 81 3L 7005317 7005336 GCATTGGCAATGATTTGCAC 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 3 5 5 133 3L 7365497 7365515 GCGAGAATCAGCTAAGGGA 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 1 11 15 80 3L 7693413 7693498 AACTGTACAAGGAAGTCATCCA 59 7693354 7693374 TAGCTTCGAATGGTTCTACCT 58 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 2 2 2 82 3L 8670531 8670551 ACTCAAGACTCTGATTCTGGA 58 8670732 8670750 TCTTCTCCAGAATGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302584 1 1 5 110 3L 8790226 8790246 TGAGATACTGGAATCTCTGGT 57 8790318 8790799 CTGCGCTTCAATGATTTGC 58 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 2 3 3 81 3L 8921173 8921192 GCCGTCATGTTCTTCATGAG 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 2 3 3 80 3L 8977955 8977975 TCAACTCAGAAATCTCGAGGA 58 8977750 8977915 CTCTTTGGAAGCTCGATTCTG 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527 1 3 5 106 3L 9069798 9069816 ACAGCTTTACAGCCTCTCC 59 9069883 9069966 TAAACTCAGTGGAAAGTTCAGC 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 1 5 5 80 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408556 9410759 GCATGAATTATCTCGGCCA 58 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 2 2 2 80 3L 9451446 9451520 TTCTATGCGGAGCTTAATTCAG 58 9451560 9451579 CTTAAAGGTGGGATTGAGGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 2 4 12 114 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 7 8 96 3L 9817654 9817674 TCGACGATCAAATAACGAAGC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 1 1 1 60 3L 9883638 9883659 CTGCATGGATCTTATGAAGCAC 59 9883898 9883916 TAAAGTCCTCCATGGCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 3 1 1 60 3L 9883639 9883658 TGCATGGATCTTATGAAGCA 57 9883899 9883917 GTAAAGTCCTCCATGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 1 2 2 80 3L 10628780 10628860 AACTCCATTATGGCTGGCA 59 10628718 10628736 GACCCGATAAAGTGCTTGG 58 NA Drosophila melanogaster 61 Mocs1 FBgn0036122 FBtr0076206,FBtr0076205,FBtr0076204 3 3 3 81 3L 11064015 11064034 CAACCGGTTACCTCAATCTG 58 11064077 11064161 AGTGGCGAATTCTTTCTCAG 58 NA InUTR Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 1 3 4 80 3L 11777435 11777514 TTCACTTGCGATATTGATTCGG 59 11777376 11777394 GGTACCCTTGACTTGTCCC 59 NA Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 1 1 1 87 3L 12183280 12183298 TCTATGACAATCCAGCCGA 58 12183400 12183418 TAGTCGTCACCGTGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 2 1 1 88 3L 12183279 12183298 GTCTATGACAATCCAGCCGA 59 12183400 12183418 TAGTCGTCACCGTGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 2 3 3 133 3L 12820167 12820186 GTATCCTGTTCGTCTATGCC 58 12819719 12820072 TTTGGAAACCAAGTAGGTGG 58 NA Drosophila melanogaster 61 CG32137 FBgn0052137 FBtr0075758,FBtr0075757 3 2 2 110 3L 13953083 13953101 AAGAGAAGGAGAGCCTCAC 58 13953175 13953737 GTGCTTGTAAGGTGGTCTC 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 1 2 6 80 3L 14193478 14193496 ACAACCTAAATGGCAGCAC 58 14193538 14193849 GTTCGTCATCATCTTGAGGTG 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 1 7 7 80 3L 14407794 14407882 GGCTAAGGAAATTACGATCCA 58 14407734 14407755 ATTCGATCACCCTTCTTTAGAC 58 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428 3 1 7 120 3L 14410284 14431533 CTACAGGGATCTTGGTACCC 59 14410183 14410204 GGATGTCTTCTTAATGCTGCTG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 mnd FBgn0002778 FBtr0075627,FBtr0114529,FBtr0075626 2 3 3 80 3L 14981280 14981298 CAATCCCTCATCGTTTGGG 58 14981342 14982959 TATCATCGTGCCCAATTCG 58 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 1 2 4 114 3L 15301839 15301858 CCGATTGTTCCTGCTATCAG 58 15301932 15302038 CAAGAAATACGGGTATACCCAC 58 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0110881,FBtr0100360 3 2 4 128 3L 15301824 15301842 AGAGTTCCCTTTGTACCGA 58 15301932 15302037 AAGAAATACGGGTATACCCAC 57 NA Drosophila melanogaster 61 CG12304 FBgn0036515 FBtr0075565 1 1 2 116 3L 15577186 15577396 ACTGCTAAAGGACGATACGG 59 15577475 15577493 TTGCCACAAACACCAAGTC 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037 3 1 5 157 3L 15851242 15852920 GTAACACAGCGTCTTCCAG 58 15845255 15845273 TTATTTGCCGAATGGGTGC 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 1 2 7 102 3L 16069728 16070085 GAGAAGAGTGAAGGATATGAAAGTG 59 16070145 16070163 TGCTGGAGCTCTTTGACTC 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0114589 1 1 6 186 3L 16107928 16108771 CAAGACCATCAATCAGGCC 58 16108918 16109140 TAAAGTTATCGATGGACTCTGC 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0075412 3 2 4 108 3L 16404182 16404201 CTATCTGTACCAGTTCTCGC 57 16400451 16404114 ATCGACATTCTCGTATTTCAGG 58 NA Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 1 2 2 86 3L 16567999 16568017 AATCGTCGACCCTCAAGAC 59 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 2 2 2 81 3L 16710876 16710894 CCTCTTTCCGGAGGATAGC 59 16710938 16711138 GTTCTGTTGCGGATTTCCTG 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 3 3 12 162 3L 16895016 16895038 GAGGAAATCGAACTAGAAAGACC 59 16895159 16895238 CTTCTTTGTCCAACTGCTCC 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 3 3 5 97 3L 16983972 16984126 ATTCGTAGATGACTCAGACCA 58 16984185 16984203 GATTTCCATCCTGGCTCTG 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 2 7 7 81 3L 17537428 17537446 AGTTCGGTAACGAAGACCG 59 17537490 17537572 GGCCTCCATAATCTAAGCCA 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 2 2 3 179 3L 17636817 17637999 TTGCAACACCGTAAAGGTC 58 17636656 17636675 CAAGGCGACATGTTCATACC 59 NA InUTR Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 3 3 3 85 3L 19252660 19253224 ATTCTGGCAGGTTATCCGG 59 19252593 19252612 GCAAAGAACATGTGATGCAC 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0074954,FBtr0302335,FBtr0074957 1 3 6 80 3L 19685466 19686092 AGGTGTACAGATGTACCAAGTC 59 19685407 19685425 AGGTCTGCTTGATCACGTC 59 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 1 1 1 64 3L 19807934 19807952 TCCTCACTGGAACAGTGTC 59 19807818 19807836 GTCTTAACGGGCAACATGG 59 NA DesignNoJunction Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 3 4 4 81 3L 20254921 20254939 TTTCCCAACAAGTTACGGT 57 20254984 20255059 GGAAGACCGTTCTTATGCA 57 NA Drosophila melanogaster 61 polo FBgn0003124 FBtr0100318,FBtr0074839 2 2 2 95 3L 20305625 20305644 GATCAAATCTCGCGTATGCC 59 20305700 20305787 GAAGTTTAGCTGCACAGAACC 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 3 3 3 92 3L 20426680 20426753 TATTTGGAAGAGCTTCTTCGC 58 20426807 20426825 CATCATTCCGACCACTCCA 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078254 1 1 3 103 3L 20792066 20792084 CATCTGTCCAAGTCTCGTC 57 20792305 20792323 TCTTGATCTCCATGCCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33056 FBgn0053056 FBtr0078314,FBtr0078312,FBtr0078315,FBtr0078313,FBtr0078311 3 5 5 127 3L 21191818 21191988 AACATATGAGGGAGCACGG 59 21191709 21191727 TATGTCCACGCTATCCTCG 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 3 4 4 197 3L 21199663 21199681 CTTTGCTCCCAACTTCGAG 58 21200651 21200669 TTCAGTATTTCCGCCAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304,FBtr0273212,FBtr0273213 2 3 4 166 3L 21205481 21205895 GACACTTGGAAATGTCTTCACC 59 21206022 21206040 TATATGGTTCTCGCCAGCG 59 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 1 2 2 71 3L 21807936 21807954 TTTACATGTGAAGGCTGCA 57 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 2 3 3 83 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718716 ATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0299882,FBtr0299880 1 3 4 80 3L 23642459 23682591 CAGCTTGTTGTATGTACGCTC 59 23682633 23682651 CAGAAAGTGCTTCAGCCAC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0301772,FBtr0300789,FBtr0301768 3 3 21 174 3R 110120 113803 CCGTTAAAGATGCTGCAGG 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Nonspecific Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0078903 1 1 2 80 3R 134134 134347 GAATGGACAAGTGCTTATTTGC 58 134386 134406 GTAGGTTGAGGATGATTTCCC 58 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 2 3 4 107 3R 151086 151105 TTCTGACCAGATCAATCCGG 59 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078921 1 1 2 94 3R 228990 230196 GTGTCTTCGACAACTCAGC 58 230254 230272 AATCCAATGCCAACCTTGC 59 NA Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 2 2 2 80 3R 776120 776202 TAACATCCATACAGTCACTGC 57 776060 776079 TTTCTTTATACAGCTGGGCG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 1 18 19 86 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100031 1100466 CACCAAATACGTTGTGCTCC 59 NA Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078681,FBtr0078680 1 2 2 111 3R 1294734 1294752 TGCTAGTTCGGTCTACTGG 58 1294882 1294900 CAGGGTTCCAGACAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765 3 1 2 82 3R 1324583 1324673 GTTCCACCAGGAGAGTCTG 59 1324519 1324538 GAAGTTCGCCGATAGAAGGA 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 3 3 12 82 3R 1586683 1587379 AAATTCGGACATGTTATGGAGC 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 1 5 5 84 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216739 2216757 TTCGTGTAGTTGTCCAGCT 59 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 2 2 2 84 3R 2467215 2467233 AAGAGATCGCCATGGAGTC 59 2467281 2467355 CTTGGACAGTTTCCAAGCA 58 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 3 2 5 99 3R 2584143 2584201 CAAGCCAGATGTCTTTCCC 58 2584062 2584081 CTCTGCTATTTGAGAGCTGG 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 1 6 11 80 3R 2724256 2734248 TGGTAAGTGTCAAGAACGC 58 2724194 2724214 AAGTGAAACTCCTTCTCTAGC 57 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600 1 2 3 81 3R 3045192 3045270 TTCCACCATGATACTGTGCA 59 3045130 3045148 GATGAGAGTGGGCAGAGTG 59 NA Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 3 2 2 108 3R 3979055 3979073 CAACTGCAAGACCACAACC 59 3975441 3978985 GAGTGGACGATTGACATTGTG 59 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0089784,FBtr0112822 1 3 8 80 3R 4660661 4664122 GAGTCTAAGGTACCCTACGA 57 4660600 4660618 GATGCTGTACTTGCTGGAG 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081993 1 1 5 146 3R 5044472 5051950 AGGAAATGATTACCACATCCAC 58 5044347 5044365 AGGTGTGATCCTTCCACAC 59 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052 2 1 4 92 3R 5198293 5198489 AACGAACAGCAGAGATCCA 59 5198219 5198237 ACGCAAGAGGGTCAATACC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 1 5 14 95 3R 5258552 5269741 TTCAGTTCCGGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 3 2 2 70 3R 5341136 5341154 AGTCTTCCCTAGTCCGGAG 59 5341033 5341051 CCCTCACTACTGTCTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9458 FBgn0037765 FBtr0082152 3 1 1 61 3R 5645369 5645389 CGTGTACAATGTCATCATGTG 57 5645264 5645282 TATAGTCTCCGGGTCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082207,FBtr0082211,FBtr0082212,FBtr0082210 3 6 9 80 3R 5841638 5842022 TACCCAAATCTAGTTCCAAGGT 58 5841579 5841597 CGGTTTGCTTACAGAAGCG 59 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183 2 1 2 101 3R 5990515 5990533 GAGAATCATCCAGAGCCGT 59 5989570 5990450 ATCATCGGCCATTTCATCG 58 NA Drosophila melanogaster 61 CG11872 FBgn0037806 FBtr0082229 3 1 1 79 3R 6133027 6133045 GTTTCCTACCAAAGGCGTG 59 6133243 6133261 CTCGTCTTCTTCCGTTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14691 FBgn0037829 FBtr0082313 2 1 2 81 3R 6579531 6579763 ACATACTGACCTGTACTTTGTG 58 6579471 6579489 ACAAATGCCCATCATGGTC 58 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301310 1 1 4 139 3R 6589660 6589837 TCAAATGCATACAGCAGGC 58 6589937 6589958 CCATCTCAATGATATTGAGCGT 58 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113219 2 1 3 114 3R 7029405 7029425 CCCGTAACGATATCAATCTCG 58 7029500 7032639 AATGAACCCATTCTCACCAG 57 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082470 3 2 4 80 3R 7614040 7614174 GATGATCGAGAGTTTATCCCA 57 7614216 7614234 TCCGTGTTAACCACAAGTG 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082498 3 1 15 185 3R 7815235 7817801 AACTCCAGCTTTATGCCAC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 1 3 15 193 3R 7815047 7817808 CTCAGATAACTCCAGCAGC 57 7814462 7814480 ATTGCTGGAAGAAGATGGC 58 NA Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 2 2 2 107 3R 8497390 8497408 TTTCTCAACACCGGAGGAC 59 8497479 8497601 ATCAACCAGACCAAACCCT 58 NA Drosophila melanogaster 61 beat-Va FBgn0038087 FBtr0302367,FBtr0082688 2 2 2 85 3R 8668034 8668332 CGAATGCAAACTCTGGCTC 59 8667967 8667985 TAGTAGAATTGCCGCCAGG 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 1 2 4 123 3R 9468114 9468132 GACGGACAGGGATCATACG 59 9462789 9468027 AACCGTAGCCGTCATAACC 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 3 3 3 94 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536294 9536312 CACTATCGACCTCCACGTC 59 NA Nonspecific Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 3 2 2 80 3R 9600884 9600961 AAATCACGAGGATGAAGACC 57 9601002 9601022 TTTACTTTGCCATCTCCATCC 58 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283 1 1 2 116 3R 10030143 10030439 TGTAGTTGTTGGCATCTTCCT 59 10030047 10030065 AGGAACAGATTGCCGATCC 59 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0301351 3 1 2 96 3R 10039719 10039738 CTGACAAATGGCTACGATGG 59 10030144 10030487 GGAAGATGCCAACTATTGTATCC 59 NA Drosophila melanogaster 61 pr-set7 FBgn0011474 FBtr0082929,FBtr0082928,FBtr0082930 1 3 3 97 3R 10142501 10142520 CCGTTTGATGAAGGTCACTC 59 10142580 10142669 AGGGAACTCCTATTGTGCG 59 NA Drosophila melanogaster 61 CG3508 FBgn0038251 FBtr0082968,FBtr0082967 3 2 2 82 3R 10485960 10485979 ATATCCAAGGAGTTTGGAGC 57 10486023 10486106 GTGCGCAGAAATTGATTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037 2 1 3 150 3R 10970954 10971050 ACGCTCTGAGGATGAATCG 59 10970822 10970840 GTGTAAATACCGCCCACCT 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 3 7 13 147 3R 11122418 11125005 GAAATACGATGAGGTTGCCC 59 11126514 11126532 GACTTCCAGGGACTTCAGG 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301027 1 1 4 85 3R 11209447 11210837 CATTAAGTCAGAGCACAACCA 58 11210884 11210902 CAAAGCTGAGTAGCTGGTC 58 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 3 2 3 97 3R 11240688 11240836 GTAATTACCCTCCAATGGCC 58 11240896 11240914 GATGAATTGCGGTATCGGG 58 NA Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 2 2 2 113 3R 11660801 11660929 AAATCAAGTCCGACGTGGA 59 11661006 11661024 TGTACATGTCCTGCTGTCC 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 3 2 8 90 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782599 TTAAATGCCAGAGCATCTTCG 59 NA Drosophila melanogaster 61 mor FBgn0002783 FBtr0302550,FBtr0083238 2 2 2 80 3R 11798317 11798426 TGCAAGAAGTATTTGGCCC 58 11798255 11798275 ATACTGCAGGAAGTGAATGAG 57 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0083231 3 1 6 116 3R 11895057 11895592 AGCCCGAGAATAACAGTGAC 59 11894960 11894978 CATCCTAGTAGACGCTGCA 59 NA Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 3 1 1 68 3R 12149301 12149322 CTTTACCCGCATCAATAAACAG 58 12149409 12149429 ATGCCACCATAGATGAATAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 2 5 5 114 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377354 12377373 GTGGAAGCGGATACATTGAC 59 NA Drosophila melanogaster 61 CG14891 FBgn0038445 FBtr0083302,FBtr0083301 3 2 2 60 3R 12398523 12398543 AGAACTTTACAACGCTACACC 58 12398563 12398583 TCCAGAAACTCCAAGGTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351 3 1 6 104 3R 12551014 12558455 CTATCGCAGGTAAGATAAGATCTG 58 12536290 12536308 AGTCTGGTAGAAGTGAGCC 58 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 2 3 3 108 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636027 12636045 GGAAGCGAGTGTAGGTCTG 59 NA Drosophila melanogaster 61 abd-A FBgn0000014 FBtr0083388,FBtr0300485,FBtr0083387 1 3 3 107 3R 12648183 12651782 ACGCTTACAGACTGGATGG 59 12636028 12636046 GAAGCGAGTGTAGGTCTGG 59 NA Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 3 3 3 82 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894759 TAATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 1 2 2 165 3R 12959027 12959046 GCAGAACCAAGATGATGTGG 59 12959173 12959257 ATACACATCCGGATAGCCAC 59 NA Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 3 2 2 142 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264943 13265025 GTGTCCAACACAATTATGTCG 58 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 3 4 4 80 3R 13678336 13678354 ATCTGGTACGGAGTGATGC 59 13678397 13678747 CAAAGAGCATCCCAAGAACC 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 1 4 7 80 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834636 13834654 TTCGTGTTACTCTTGGCGA 59 NA Nonspecific Drosophila melanogaster 61 CG15803 FBgn0038606 FBtr0302308 1 1 1 208 3R 14179560 14179578 GAGAGGGTCAAAGACCTGG 59 14179313 14179331 ATATAGTGATGCGGACGCT 58 NA DesignNoJunction Drosophila melanogaster 61 fru FBgn0004652 FBtr0083649 1 1 14 120 3R 14329661 14329679 ACATAGACAGTGCCTCCTG 58 14261504 14329578 GTGTTGTACCAAAGAGGCAG 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0112924 3 1 4 98 3R 14845036 14845054 GAATCGGAGGATGACGAGG 59 14845114 14846664 GAAACGTTGATACCTGTCCAC 59 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0300809,FBtr0300808 3 2 3 82 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873435 15873529 CAAATCCACCCAACAGAAAGG 59 NA Nonspecific Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089485,FBtr0089487,FBtr0089484 1 3 5 88 3R 16365048 16365130 AGCGTCAAGATCCTGTGAC 59 16364978 16365001 TGTTCCACTAGTAGATCCATTCTC 59 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 1 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 3 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718,FBtr0299720 3 2 3 84 3R 16679652 16679670 ATCTCCGATGAGGAATGGG 58 16679380 16679607 TCAGGAATTCCTTCATGTACTC 57 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 3 2 2 80 3R 16727883 16727901 GGCTTCATCCTAACGAGCT 59 16727944 16728163 GTTCTCATAGACGAGACCCA 58 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 2 2 2 80 3R 16751903 16751921 TAGTGAACGGTGTCATGCA 59 16751963 16752075 TTGTTGGATCATAATCCTCGC 58 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517 3 1 4 63 3R 16894727 16896003 GAGTCCTGGATCAAGGAGG 58 16896030 16896048 AAGCCGTAAGAGTGACCAG 59 NA DesignRelaxed Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301588,FBtr0084019,FBtr0084020,FBtr0084018,FBtr0301589 1 5 16 163 3R 17004778 17004798 TTATGAACTCCATGAAGGTGG 57 17004923 17005004 CACCGTGTGGTAATACTGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084063 3 1 22 93 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17179447 17200793 TAATCGAATTCTTGAGCCTCTG 58 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 2 2 2 80 3R 17585747 17585821 TGGCTCATCAGCTCTATCC 58 17585863 17585883 CATCCGTTCCAAATATCAGCT 58 NA Drosophila melanogaster 61 CG6439 FBgn0038922 FBtr0300788,FBtr0084190 3 2 2 135 3R 17844429 17844510 CGGGCTACGGATAACTACG 59 17843785 17843803 AGTAGCACTCGAAGTCCAC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 3 5 5 89 3R 17888572 17894845 CATCCAGATTTCAACTTTGTCG 58 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0301029 2 1 3 107 3R 18209068 18209178 TTATGCAACACGATGAGGC 58 18209303 18209321 CGTCCCTTTCATGGTTCAG 58 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 1 3 3 82 3R 18370410 18370491 TAATTCTGATGGGCCTCCT 57 18370346 18370364 AAACTTTCCAGGGAACCAG 57 NA Drosophila melanogaster 61 CG17119 FBgn0039045 FBtr0084357,FBtr0084358 3 2 2 81 3R 18880540 18880617 TAATTACGATGATTGGGTGTCG 58 18880480 18880498 GAACACATCGAAGAGCACG 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084511 3 1 2 89 3R 19782929 19782948 AGGCCTATGTGGATGATACC 58 19782711 19782877 TCTCGACAGAGTTGGATCG 58 NA Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 3 4 4 71 3R 19815429 19815507 TATTGGAGCAGACAACTGG 57 19815376 19815394 GTTGACGGGAACAAGTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113277 3 1 4 110 3R 19816966 19817776 CAACTCAACCATCTCACTCG 58 19816875 19816893 TCTAAGGTCTCCACGAGTG 58 NA Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 1 2 2 165 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006154 20006172 CTGTTCTGTCGAGGATCCC 59 NA Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 2 2 2 80 3R 20058626 20058644 CCGACACCGAATTCTATCC 57 20058686 20061548 GAATATCGTCCTCTGAAACGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 2 4 6 92 3R 20079843 20080373 CCCAAACAAATTGATCAGATCC 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 2 3 18 81 3R 20521109 20521127 ACGCTGATCAAGAAATGCA 58 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100629 1 1 18 103 3R 20526444 20527822 GTTGTCAAATGAACACCATCC 58 20528743 20528763 CTCTGTCACGAGTGATATCAC 58 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084697 1 1 2 80 3R 20618911 20618929 CTTGATGAACGCTTCCACC 59 20618973 20619116 GATTCCCGTGTGAGATCGT 59 NA Drosophila melanogaster 61 CG31121 FBgn0051121 FBtr0084724,FBtr0084723 1 2 2 80 3R 20707546 20707637 AAATAAGCAGGTGCAGCAC 59 20707484 20707502 AAGTCGACTAGCACTTGGG 59 NA Drosophila melanogaster 61 CG11790 FBgn0039265 FBtr0084760,FBtr0084761 2 2 2 165 3R 20874295 20874313 TGGGAGTATTGGAAGCACC 59 20874502 20875002 AATTCGTTTACGGCACTTGG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 3 6 6 85 3R 20960336 20960421 GGATTCTTTCGGGAGAACC 57 20960470 20960488 TTCTGACTGATCGGTAGCC 58 NA Drosophila melanogaster 61 CG5890 FBgn0039380 FBtr0301147,FBtr0084908 3 2 2 112 3R 21694500 21695268 GAGGGATCAGGTTGATCGT 58 21695344 21695362 GCGATCGAGTTACCAAGTC 58 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290137 2 1 5 80 3R 21742357 21742431 CGAGTACAGACCTTCGGAG 59 21742475 21742493 ACAGTGCAAATAAACCCGC 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290140 2 1 5 86 3R 21740144 21740165 CGTAGAAGGCTGTGATTATGAG 58 21740212 21740289 CTGAGCGATCCAGATTCAG 57 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 1 3 3 80 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905450 21907624 CAAGACAACCTTCTGATCGC 59 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 3 3 3 82 3R 21904394 21904538 AGTACTCAACGATCGAGAGG 58 21904331 21904349 ACTGGATCTTCGACTGGAC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 1 4 10 113 3R 22416346 22416364 ATAATGACGACAGCGACCA 59 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0300939,FBtr0085099 3 2 3 172 3R 22688276 22688367 TTTCGTCAGATGCGTTTCC 58 22687850 22687868 AAATCCGAGTGGAGACCAC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 1 4 9 161 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 3 5 5 125 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 1 2 2 80 3R 23455221 23455299 GGCATAGATCGGATGTTATCCT 59 23455339 23455358 AGATGATGCCCGAACTATCG 59 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 2 2 3 131 3R 24027913 24027931 GATCTGAGTGCCGAAATCG 58 24052503 24060799 CTCCGCTTTCTTAAAGCCA 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0301651,FBtr0301650 3 2 10 107 3R 24962332 24962351 GTGTTATTCGTCCTGGTTGC 59 24962421 24962809 AATGGGCTGTACCTCTTCG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 1 3 5 83 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423185 25423894 CGTTGGACTTTCACATGGTC 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540,FBtr0085539 2 2 3 170 3R 25574573 25574592 TGCTCGGTGTTATAACACTC 57 25574347 25574365 GTTCTTCACCGACTTCAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 3 2 2 132 3R 25817724 25817813 TTATTTGAGCTGCACAGTCC 58 25817611 25817629 CAGGTATGTCCAGAGGCAG 59 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 1 2 3 135 3R 26134963 26183984 AAGTCAAGATTGAGGACGAGG 59 26184080 26184099 TAGCGATCGAATACGAGCAG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 3 4 13 197 3R 26421340 26426932 AGCGGAACAAATTAGGCAG 58 26421161 26421181 TGATCTCCACAATAGTCTCCC 58 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 2 2 2 80 3R 26709833 26709911 AAGTACTACAAGATCTGCTCTG 57 26709774 26709794 ATCAATATAGGGTCGTTTGGC 58 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 3 2 2 80 3R 26709831 26709910 AGTACTACAAGATCTGCTCTGAG 59 26709773 26709794 GATCAATATAGGGTCGTTTGGC 59 NA Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 3 2 2 60 3R 27286573 27286650 AAGCATAGATTTCTGGACGC 58 27286532 27286550 CACGGTTATCGGCAATGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1499 FBgn0039852 FBtr0300875,FBtr0300876 1 2 2 80 3R 27386439 27386457 GGATTCGGTTTACCAGGAC 57 27386500 27386585 TAAGAGTGGCATCTGTAGGG 58 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 1 6 6 84 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 2 12 22 80 3R 27707590 27784774 GTTAATATTGGAGTTAAGCGCG 58 27707531 27707550 ATTGTTATTGTCGGAAGCGG 59 NA Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 1 2 2 94 3R 27815039 27815114 ATTCCTAAGACGGTGCCAC 59 27815172 27815190 ACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 1 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 2 2 2 95 4 330249 330328 TATTGCAGCAGATTGGTCAG 58 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 2 2 2 81 4 822726 823031 AAAGTCATGGGAGAGTGTG 57 822663 822682 TTTACTGAGTCACGACTCAC 57 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 2 9 9 80 4 1068496 1068516 AGGATATCTGTCTCCTGAGGT 59 1068343 1068457 TAAAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 3 2 9 103 4 1065794 1065815 TCTAGCACTACTCTTGAAGACG 59 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 1 4 8 80 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129789 1129807 TGTTCTTGCCCGACTAAGG 59 NA Drosophila melanogaster 61 cals FBgn0039928 FBtr0089208,FBtr0089207 2 2 2 82 4 1140617 1140636 CTCGCCTAGACTTATGTGAC 57 1139635 1140572 GTGCTTTGTCTTAAGGGCT 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 3 5 5 81 4 1230676 1230694 CCAAGTAGCTCAAGTGGCT 59 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302411,FBtr0302410,FBtr0302409,FBtr0113761 2 4 4 100 U 1179118 1179137 AATAACGCAATGGATTTGGC 57 1179198 1179274 CGTAGATTTACTGAACACCGA 57 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 2 4 4 81 X 522709 522793 CTTGAAGAACATCCAAACCCG 59 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301844 2 2 6 172 X 1395970 1395988 ACACAAACTTCGGAAAGCG 59 1387282 1395834 TGTGCTTAGAATTGCCGTC 58 NA Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327 2 1 2 87 X 1947330 1947862 GTATCCAAGAATTTACCAGCGA 58 1947908 1947928 CCAGGTGGGTATCATTATGGA 59 NA Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428 3 1 2 145 X 2054276 2054428 GACACGATCTGCGAAACTG 59 2054149 2054168 ATGTAGGTAAGGTCGAAGCG 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 2 3 3 107 X 2609221 2609239 AGCTCTGTAACTCCTCCGA 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 CG3603 FBgn0029648 FBtr0070558 2 1 1 61 X 2842144 2842162 AGTGGGAGTACTAGCTGGA 59 2842256 2842274 CACGACCAATTCCTGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 2 4 12 122 X 3175075 3175093 TTTGAGTCCAATTCACGCA 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 2 4 4 91 X 4619145 4619164 CCAGCACTATGACTATCCCA 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589 3 4 5 81 X 5123366 5123386 GGATCATTCCTGAATCTGACC 58 5123429 5127484 GATCCAGCAGCTGTTTGAG 58 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 2 2 2 122 X 5604994 5605517 TATTTCTGATCGGCTATGCCT 59 5604892 5604910 CCTTGTCCTCGTGACTCAG 59 NA Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 2 2 2 153 X 5964445 5964464 CCTACGAGGATTGGTATGAC 57 5964221 5964329 GACGGATTCTCAGATCTGC 57 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 2 2 3 124 X 6263371 6263390 GGAGTTTAAGTTCAGCTGGG 58 6263476 6263564 ATACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0300841,FBtr0100211 3 2 21 195 X 6982732 6982750 AAGCGAAAGACACTCACTG 58 6980002 6981655 CATAACGTGACATTCCGGA 57 NA InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 2 7 21 81 X 6982619 6982637 TTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 3 7 21 82 X 6982619 6982638 TTTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301240 1 1 2 100 X 7111914 7126407 AGGAACCAATTCCGACTCC 59 7126471 7126489 TAACAATGTCCGAGAGGGC 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 3 6 7 172 X 8131041 8131059 TCAGTCGTTCCAGCATCAG 59 8131194 8131275 ATAAAGGATATCCCGCCTCG 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0100376 1 1 7 80 X 8085957 8085976 AGATACTCGAGGTCAATGGC 59 8086016 8086146 ATTTGATGCAGTCGTGTATGTG 59 NA Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 1 1 1 96 X 9503648 9503666 AAATCAGGAGGTGGCAGAG 59 9503794 9503812 TTCCCTGGTCTCCTTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 85 X 9524046 9524066 GCCGTCGGATTATATTAATGC 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 85 X 9524046 9524066 GCCGTCGGATTATATTAATGC 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0071402,FBtr0302723 1 2 3 80 X 9575212 9575315 TGCAAATGACTCAACTCAACAG 59 9575153 9575173 GTTGCTGAGGATTGTTACCAC 59 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383,FBtr0089386 2 4 4 81 X 9674917 9675201 GCCCATGATATTGAGGCCT 59 9675246 9675264 CCTTGTCCGAAAGGTTCAC 58 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 2 2 2 96 X 9857825 9857845 CATTCGATCAGGATAACGACG 59 9857689 9857767 AACAAGTTGCTCTCGAAGC 58 NA Drosophila melanogaster 61 CG15313 FBgn0030173 FBtr0071418 3 1 1 204 X 9943838 9943856 CACTACCAGTTATTGGCCA 57 9944077 9944098 TGTAGACCTCGATGTATTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 2 6 8 126 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173111 10173129 ACCCAGATCGTATGATCCA 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 3 6 8 127 X 10173217 10217611 GAAGGTCAAAGAGATGATGGA 57 10173110 10173128 CACCCAGATCGTATGATCC 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 1 3 3 85 X 10641994 10642012 CTATTTGGAGTGCGGACTG 58 10642057 10642150 GGCCATTATAGATCATATCCCTC 58 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0300732,FBtr0300733 3 2 4 86 X 11331114 11331132 CATACTTGGAGGTCTCGCA 59 11330420 11331067 GGGAGTTATTATTCTCCTGCAG 58 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073499 1 1 2 84 X 11351723 11351741 CGGCAACGACATACTACTC 58 11351789 11352272 AAGTTGGGTTCGGATAGCT 58 NA Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 1 2 2 100 X 11476639 11476657 CTCTTCACTTGCACTTCGC 59 11476498 11476576 TCGCCTAGTCTAATCAGCTG 59 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 3 2 4 164 X 11567983 11568085 GCCATACAAATCCCAGCTC 58 11568213 11568231 GCTGTAGCGTATTGTAGCC 58 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 1 4 4 119 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698381 11698399 TCTCCAATGAGACGCTCAC 59 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558 1 1 2 99 X 12359507 12369676 TGAGGTGCAGGAAGAATCG 59 12369739 12369757 AAAGTCCAGATACTCCGCC 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073660 3 1 5 95 X 12483942 12483960 GGTCGAGATACCCAAGGAC 59 12483346 12483885 CAGAACAAGTCTGTAATGCGG 59 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445,FBtr0113444 2 2 2 81 X 12498605 12498686 TTTCATTCAGCGGGTTTGC 59 12498731 12498749 ACTCGCAAATGAGACACGA 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0073676,FBtr0300376,FBtr0073679,FBtr0073677,FBtr0300375,FBtr0073678 1 6 6 83 X 12545437 12545518 GATAACAATAAATGGTGGCCC 57 12545562 12545581 ATGATCGAACCGTATGAGTC 57 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 2 3 3 82 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604678 12604697 CTATTGGTCATAGCTGACGT 57 NA Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 1 2 2 90 X 13644349 13644367 TAAACAATGTGCCATCGCG 59 13640810 13640828 TAATCACGCATGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074010 1 1 4 195 X 15228693 15229028 GATATTTGGATACAGAGCCCG 58 15229185 15229203 TCGGTTTGTTCGACTTTCG 58 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 3 2 2 91 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403813 15403833 CTTGTCAATCTTGTCCGTCTG 59 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 2 5 5 165 X 15688454 15688537 GATCCACGTAACAAAGTTCCA 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 sd FBgn0003345 FBtr0074101,FBtr0074100,FBtr0112824,FBtr0301543,FBtr0301544 2 5 9 133 X 15714507 15714525 GAACCAGGAAGCAAGTCAG 58 15717255 15717353 GAAGGGCTTGATGTCTTGG 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 1 4 4 84 X 15769164 15769182 CTAGATTTAGGCGATGGCC 57 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 3 2 12 82 X 15793036 15793054 TCCTGGAAAGCATCCTTCC 59 15793100 15793487 TCTTGTCCTTCCTCATCGC 59 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301232 3 1 2 197 X 15816165 15816513 ATAATCGGATTTATGGCGCA 57 15816673 15816691 ACTACGCTTAAGCGATCCA 58 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 3 3 3 125 X 16281541 16281559 TGATAATCATCGGCACGCT 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300034 3 2 4 121 X 16603926 16603944 CGGGCTACTACAAAGTGGA 59 16604100 16604245 CACCAGATACTTTGAGGGCT 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 1 5 5 85 X 16719520 16719541 CTGGATGGTACTTCGAATTTGG 59 16719584 16719678 GAGCCAAAGTAGGAATTGATGG 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0112995,FBtr0112994,FBtr0074338,FBtr0074337 3 5 5 90 X 16718725 16718743 GAAGGGATACCATGTGTCG 57 16718794 16718964 CAAATAGATTTGGTACTGCTCG 57 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0074413 2 2 3 93 X 16867146 16867165 ACGTCTACAAGACGATGGAG 59 16867009 16867090 ATGTCGCTGAGGAACAGAC 59 NA Drosophila melanogaster 61 CG4991 FBgn0030817 FBtr0074385,FBtr0290020,FBtr0074384 1 3 3 242 X 16997709 16997886 TGATGACATTTGGCGTTGC 59 16998092 16998110 ACTCCTTGACGATCTCCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 1 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 3 2 6 80 X 17794853 17797990 TTCACCCAGGCATATAGCA 58 17798034 17798052 GACCTGCTTTATCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 1 2 2 80 X 17990585 17990604 AAAGACTGATTCGTTCGCTG 59 17990641 17990734 CCTTGGTTATTCTATTGAAGTGACC 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 3 1 7 84 X 18006015 18006037 TAAGATACTGAAACTGGAGTCCG 59 18000947 18005973 GGCATTGAGATCGTTGATCTC 59 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 2 3 6 162 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286878 18286897 GTGTAGTCCATATCGAAGCC 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 1 4 4 80 X 19236629 19236777 GTACTGATGTACAACAGTGCC 59 19236569 19236587 ACAGCTCCCATTATTGCGA 59 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 1 2 2 80 X 19413771 19413792 AGAGAAGTATCTGGATACGGTG 59 19413642 19413731 TACAGATTGGGCATGACCAG 59 NA Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 2 2 3 160 X 20543397 20547856 TAAAGACATCGCAAGTCCG 58 20543255 20543273 ATTGGTTGGAATCCTCTGG 57 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678 2 4 5 99 X 21221794 21221812 GACAGCTGATGATGCACTG 59 21221875 21222902 ATGCTTGTACTCGCTCCTG 59 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 2 5 8 83 X 21247628 21247646 CTAATACGCGCCTATCTCG 57 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 1 5 8 82 X 21247629 21247647 TAATACGCGCCTATCTCGT 58 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 2 3 5 95 X 21860082 21864240 TACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 3 3 5 95 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864299 21864317 GTAGACCGTAGTCCTCCCT 59 NA Drosophila melanogaster 61 fog FBgn0000719 FBtr0077342,FBtr0100538 2 2 2 169 X 22246596 22246614 TTTATGTGGCCAGACTTGG 57 22230964 22230982 CCATTCTCTGGACATTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mir-306S FBgn0067698 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M2:48Bb FBgn0011916 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30199 FBgn0050199 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3081a FBgn0063381 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U27:54Ea FBgn0063388 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:snR38:54Ec FBgn0063373 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snRNA:U7 FBgn0053504 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32128 FBgn0052128 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C788b FBgn0086062 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 1 5 5 80 XHet 66321 67547 AGTCACCTATAGCTGCACG 59 66259 66279 CTCGTAATGTCTTCCTGTCCT 59 NA Nonspecific Drosophila melanogaster 61 CR33222 FBgn0053222 FBtr0300652 3 1 2 91 X 7792950 7795284 AATATGAAGGCCGTTTGCG 59 7792877 7792895 TTTACGCACAGTCTTGCAC 59 NA Nonspecific Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300454 3 1 2 132 X 657486 657505 TAGTTCAAGTGTCGCCTACG 59 657166 657187 GCCCAAATAAAGAAGAGTGACC 59 NA DesignNoJunction Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100650,FBtr0077353,FBtr0100652,FBtr0100651,FBtr0077352 3 5 5 190 X 21884788 21884806 GTGGCTCTAGTTCCATGGA 58 21885024 21885042 CACACTTCTCCTACTGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 3 1 1 154 X 21847817 21847900 AAGGTTCTCAAGGACACCA 58 21848371 21848392 GCAATAACTCGATAGTCTAGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Cyp6t1 FBgn0031182 FBtr0077212 3 1 1 60 X 21389465 21389483 GTCGTATGTGCATTGAGGT 58 21389423 21389441 ATGGTGAAGAGGTGTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1304 FBgn0031141 FBtr0077271 3 1 1 63 X 20835754 20835774 ATATAACAACCAAGTGGTGGG 58 20835711 20835729 TGGATAGCTCGTTCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 1 5 5 80 X 20644230 20644250 AACGCTAATATACAGGGTGGT 59 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 run FBgn0003300 FBtr0077279 1 1 1 92 X 20566421 20566850 TAAGCAAAGCTATGGCTATCC 58 20566904 20566922 TAGCCGTAGGTCATGTACG 58 NA Drosophila melanogaster 61 Cyp6v1 FBgn0031126 FBtr0077276 3 1 1 95 X 20531661 20532013 CGATCCTAAGTACTGGCCG 59 20532072 20532090 AAGGGCATGTAGGACATGG 59 NA Drosophila melanogaster 61 RunxA FBgn0083981 FBtr0110992 3 1 1 101 X 20464608 20468117 TTGGCAATTGTCAGAGTGC 59 20464525 20464543 TGGTGCAGGACGATAATCC 59 NA Drosophila melanogaster 61 CG9578 FBgn0031094 FBtr0070008 2 1 1 103 X 20064387 20064465 CATGGAGGAGTGCTTTGTG 58 20064532 20064550 AGCTGCTCTTCAGGATGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074816 2 1 3 95 X 19635195 19638306 GTAACAACAAAGCAGCGAC 57 19635118 19635136 TTCTGGTTAGGGAACCGTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14232 FBgn0031061 FBtr0074813 2 1 1 89 X 19597496 19597514 CGAGGAGGGTTACAAGGAG 59 19597220 19597444 TCAGCGTACAGCTTAAACTG 58 NA Drosophila melanogaster 61 CG14231 FBgn0031060 FBtr0074814 2 1 1 60 X 19595603 19595621 AGTGATTGCCAATGTGCTG 59 19595506 19595579 AATAATGCCTCCATAGCGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 1 2 2 80 X 19533359 19533378 GTCCGCATATGAATCCTCAG 58 19533421 19533491 TCCACTGGTACACCTTCTC 58 NA Drosophila melanogaster 61 CG14212 FBgn0031045 FBtr0074742 2 1 1 89 X 19520378 19520397 ATAGTTGCAACGATCTGTGC 59 19520449 19520467 TCATCTTACCGTGCAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 out FBgn0259834 FBtr0074682 2 1 1 92 X 19205652 19205735 CAATTCTTGGTATCTTGACGG 57 19205580 19205600 CTAACCAAAGGAGTAAAGCCA 58 NA Drosophila melanogaster 61 CG42506 FBgn0260232 FBtr0300640 1 1 1 80 X 18881221 18881242 CCCTGTTCACAGAATTCTACTC 58 18881277 18898630 CCTTCTGGAATCTCTATTGAAACTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 1 3 3 107 X 18461161 18461553 GACTACTTGAGATTGTTTGGC 57 18461620 18461640 CTCCAAGTGATAGACATTGGT 57 NA Drosophila melanogaster 61 Rad51D FBgn0030931 FBtr0074592 3 1 1 60 X 18394619 18394639 CATACAATTGGTTGCCATGGA 59 18394658 18394679 AATCTTAGGCTCATCTAGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 1 3 3 80 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027154 18027174 GTACGTGTACATGAGAGTCTG 58 NA Drosophila melanogaster 61 CG6847 FBgn0030884 FBtr0074505 3 1 1 111 X 17816095 17816115 GATCTTCAACTCCTTCAACGA 58 17816185 17816265 ATCGTCTTTCTCGGATATTTCG 58 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 2 3 4 80 X 17022884 17022904 AGCACAAAGATCTTTGACAGC 59 17022946 17023196 AATGACCTGATGACCCTGC 59 NA Drosophila melanogaster 61 CG12433 FBgn0030811 FBtr0299577,FBtr0299578 1 2 2 60 X 16917162 16917182 CGAGATATTGGATGACCTCAC 58 16917204 16917222 TGTAATTGCGATGAAGCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 2 2 2 80 X 16444489 16446383 TCGAAGTCAAGGATCTGATGG 59 16444429 16444448 CGTTCTCCATCGGATAGGAG 59 NA Drosophila melanogaster 61 CG12395 FBgn0030722 FBtr0074260 1 1 1 60 X 15956119 15956140 TTGCTTACGATGGAAAGAACTC 59 15956080 15956098 GATGATGCTTGCGTAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 1 2 2 83 X 15651251 15651354 TATCTATACGACGTTCGAGCA 58 15651397 15651417 TGAACTTCTTTAGCATGAGGG 58 NA Drosophila melanogaster 61 CG8239 FBgn0030683 FBtr0074087 1 1 1 163 X 15643975 15644055 GAATGAAGTTCATCGATTGGC 58 15644180 15644198 TATCGTAGAGTCGGGACAG 57 NA Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059,FBtr0074058 1 2 2 91 X 15597345 15597614 CAAATCTGATCGGCTACGC 59 15597272 15597290 TACATAACACCAGCCGGAG 59 NA Drosophila melanogaster 61 CG14407 FBgn0030584 FBtr0073989 2 1 1 84 X 14731899 14731917 GCAGATTATGCGGATGCAC 59 14731773 14731852 GTAGTCCTTGACACCCTGTC 59 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0100150,FBtr0073990 3 2 4 71 X 14725638 14725656 GATACGAAGTGGAGCTCGA 59 14725492 14725511 TGATTCTCACCACACTTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0073920,FBtr0112982 3 2 2 71 X 14182787 14182811 AGAGCTTCATCGATAGATATCATCC 60 14182586 14182607 CCGAAACAAGTAATGTGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 mRpL38 FBgn0030552 FBtr0073902 2 1 1 90 X 14121097 14121115 CACTTACTGGACCCTGGTG 59 14121168 14121242 GGGTATGTTGGCAATGAACC 59 NA Drosophila melanogaster 61 CG10992 FBgn0030521 FBtr0073838 3 1 1 141 X 13674679 13675205 ACGGATCTAATCAGGGCTG 59 13674556 13674575 GCATAATCGACGGTGTAACC 59 NA Drosophila melanogaster 61 CG15756 FBgn0030493 FBtr0073783 3 1 1 92 X 13428984 13429002 TACTATTCGGTGCCACTGC 59 13429056 13429141 GGATAATGTCTGCATGTCCAC 59 NA Drosophila melanogaster 61 Syt12 FBgn0261085 FBtr0073767 1 1 1 80 X 13258890 13258969 GCCTTAACTACGATCAGATGAG 58 13259010 13259028 ATATGAGTCCCTTGGCCTC 58 NA Drosophila melanogaster 61 CG2209 FBgn0030441 FBtr0073717 1 1 1 60 X 12916429 12916447 GATCCAGAATTCGAATGCG 57 12916469 12916489 TCATAGTCTTCAAGGATTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4395 FBgn0030437 FBtr0073753 1 1 1 82 X 12848442 12848462 GTTCCGATACCAGAATGTCAC 58 12847849 12848400 GCAAATCGGAATCGTAGTCTG 59 NA Drosophila melanogaster 61 CG4645 FBgn0030435 FBtr0073692 3 1 1 153 X 12805131 12805450 CATTCTCTGGGTGATCAATATCTC 59 12805562 12805580 ATGTGCACTCAGGATTCCA 59 NA Drosophila melanogaster 61 CG32650 FBgn0052650 FBtr0073698 2 1 1 60 X 12792598 12792618 GAAGACATTTGTGAAGACCCA 58 12792558 12792578 GCAATCATGGTGAAACAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32651 FBgn0052651 FBtr0073672 2 1 1 60 X 12300702 12300725 GATATTAAGAAGTCCATTCGACCC 59 12300665 12300685 TTAGCATAAGGACCCTACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 1 2 2 80 X 11980916 11980934 ACACCTATCAAGTTTGGCG 58 11980786 11980872 TATGCAACGACTTATCGGG 57 NA Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 1 2 2 80 X 11805152 11805171 ATCATCACGATAGTCTGCCG 59 11805036 11805109 GATCGGGTTCAGGATTGGA 59 NA Drosophila melanogaster 61 ATP7 FBgn0030343 FBtr0273257 1 1 1 80 X 11756031 11756120 AATGCCCACAAGGTAAAGAC 58 11756162 11756181 GGTAACCTTACTGGTCATCG 57 NA Drosophila melanogaster 61 CG15199 FBgn0030270 FBtr0073473 3 1 1 179 X 11035195 11035850 CCACCAGAACTCATGACGA 59 11035034 11035052 AAGCTAGGGACATCCAAGC 59 NA InUTR Drosophila melanogaster 61 CG2061 FBgn0027498 FBtr0073429 2 1 3 186 X 10986740 10986820 ACTCGTATTTCGCTTCGTC 58 10987087 10987105 AGGGATTCTTCAGGTAGCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 spri FBgn0085443 FBtr0112690 1 1 4 80 X 10386360 10386549 GTGTGAATTAATAGCTGGTCACC 59 10386302 10386323 GTGTATGCCCTCAAAGAATCAC 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0302373 1 1 3 170 X 10266079 10266097 GTGAGTTCCACTTGAGCAG 58 10265670 10265688 TGGTGGTGAAGTCATCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32690 FBgn0052690 FBtr0071437 3 1 1 114 X 10098473 10098494 GCATTTCTCGAACAAGTTACAG 58 10098634 10098652 TTTGGATTCCTCGGATTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071267 3 1 2 128 X 8799407 8800149 TCGAACGGATCACCATGTC 59 8799297 8799315 GCTCCTCGTAGATCTTGCA 59 NA InUTR Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 3 3 3 86 X 8466541 8466560 TGAGGTTCGACCACTATGTG 59 8466323 8466492 TGTTCAGTTCATTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 3 2 2 283 X 8143669 8143747 CTGAAGAAGCCGAACTGGA 59 8143404 8143422 GTGTTCACGTAGATGCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089977 1 1 7 94 X 8130601 8130619 GTCATCGGTAGGATTGTGC 58 8131966 8132049 AGTGATGTGCCGTAGTAGG 58 NA Drosophila melanogaster 61 CG1571 FBgn0029993 FBtr0071106 1 1 1 89 X 7971690 7971708 AAGGAGAAGGCACTCATGG 59 7971819 7971842 CTTTAGCCTAACTTCATCATAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15332 FBgn0029986 FBtr0071127 2 1 2 123 X 7849837 7849856 GTGTTGTGGACCAATAAGGA 57 7849597 7849615 CTTCAACTCTGTCACCTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpS14b FBgn0004404 FBtr0071096 2 1 1 126 X 7829360 7829378 TCCATGTCACGGATCTGTC 59 7829468 7829545 TTCTCAGCCACATCCTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11368 FBgn0040923 FBtr0071058 1 1 1 174 X 7346293 7346311 CATTGGTCTGCTACTGGTG 58 7346523 7346541 TTAACCGGTAGATGCAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3226 FBgn0029882 FBtr0070993 1 1 1 80 X 6547753 6547948 GCCAAGAGATATCTGCACG 58 6547691 6547710 GTTCAAGGTGATGAAGAGCT 57 NA Drosophila melanogaster 61 CG15896 FBgn0029858 FBtr0070898 3 1 1 77 X 6186687 6186771 CTTGACCAGCAATCTGTCG 58 6186812 6186830 AAGAAGTCTGTCTCCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15912 FBgn0029712 FBtr0070677 1 1 1 60 X 4443603 4443622 TTCTGACTTCCTACGAAGCC 59 4443644 4443663 AGCGGAATTTCGAAGATACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 2 2 2 85 X 4432734 4432817 AATCATGACGAACACGTGG 58 4432667 4432686 ATAATCTCAAAGTGCTCGGC 58 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 2 2 2 90 X 2491032 2491361 GTTATGTGGTCACCCAGGT 59 2491415 2491433 ATCGCGAAGAAGCAATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG13760 FBgn0040375 FBtr0300707 1 1 1 86 X 2478555 2478573 GACACTATGTGGTGCTCTG 58 2478420 2478505 GACAAATGTGGCCATCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 futsch FBgn0259108 FBtr0300225,FBtr0112628 2 2 2 101 X 1327434 1327516 TTAACATGCTTGTTGACGGC 59 1327580 1327598 TGTTTAGGCGGGTCATCAG 59 NA Drosophila melanogaster 61 CG11418 FBgn0024360 FBtr0070237 2 1 2 60 X 1240148 1240222 CGATCAGTATTGCATCACTGG 59 1240108 1240129 CATTTCACCGAACATGTAAAGC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG3655 FBgn0040397 FBtr0070181,FBtr0113327 1 2 2 87 X 971123 971253 CAATCGAACAGCCATGGAC 59 971054 971072 ATTCTTGCTCCAGTAGGCG 59 NA Drosophila melanogaster 61 Su(Ste):CR42425 FBgn0259856 FBtr0300153 1 1 1 60 U 7785461 7785480 AAAGCAGGAATGTTTGTCCG 59 7785503 7785521 CAACGCACTACGGAATCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42411 FBgn0259842 FBtr0300141 2 1 1 126 U 6390253 6390272 CAATGTTCTAGGGATGACGT 57 6390361 6390379 TAGTAGGTGATAGCTGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302581,FBtr0114112,FBtr0114111 2 3 4 103 U 1243089 1243107 TTGGTAGTGGAGCTAGTGC 59 1243171 1317231 GTTCAGCAATTGTTGTTCTCTG 58 NA Drosophila melanogaster 61 mGluRA FBgn0019985 FBtr0089184 1 1 1 80 4 965211 966854 CTGGAAATTCCTATGAGGTGC 58 966894 966914 AAAGACATACAAGAGCCACTG 58 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300555,FBtr0300558,FBtr0300554,FBtr0300556,FBtr0300559 1 6 6 80 4 370149 370171 GATGAAGAACATATTGGGTCAGG 59 370035 370110 TCGAGTATAACATCGCCGAC 59 NA Drosophila melanogaster 61 snRNA:U6:96Ac FBgn0004190 FBtr0084652 1 1 1 61 3R 20382980 20382998 GAGAAGATTAGCATGGCCC 58 20383023 20383041 AAATGTGGAACGCTTCACG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 RNaseMRP:RNA FBgn0065098 FBtr0091662 2 1 1 60 3R 19555865 19555884 ATATGGACGAGTTGGTAGGA 57 19555824 19555844 GGTTTCTCAGACGAGAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bxd FBgn0020556 FBtr0083342,FBtr0083341 2 2 4 89 3R 12579513 12598589 TTCAGAACAACATAGCACTCAC 59 12579445 12579468 CCTCTGGAGTTGTGTAATATTTGG 59 NA Drosophila melanogaster 61 pncr002:3R FBgn0063127 FBtr0091948 3 1 1 103 3R 2525626 2525750 GATACGTAGAGATTTAACCCTTCTG 59 2525547 2525565 ATTGGGTGTTGATGTGGGA 59 NA Drosophila melanogaster 61 CG2003 FBgn0039886 FBtr0085870,FBtr0085871 2 2 2 95 3R 27815038 27815113 GATTCCTAAGACGGTGCCA 59 27815172 27815190 ACGTTTAGCTGGAGGACTG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 CG1792 FBgn0039860 FBtr0085819 2 1 1 75 3R 27442217 27442236 CAGATCGAGGTTCTTACTGG 57 27442327 27442345 AGGGTGAGCAAATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 Prosalpha3T FBgn0261395 FBtr0085738 3 1 1 60 3R 26948478 26948496 TGGGCAGAGATAGCTTGAC 59 26948436 26948454 TTACCGTAACGCTGTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33920 FBgn0053920 FBtr0091924 3 1 1 85 3R 26870379 26870397 AACCCGATAGCCAGTTACC 59 26870255 26870330 ATCACGAGATCGTGATCGT 58 NA Drosophila melanogaster 61 Ctr1C FBgn0062411 FBtr0085750 2 1 2 285 3R 26789764 26789784 TTTCATACTGGCGATTCAGAG 58 26789403 26789517 CATGATGGTGAGTGTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12071 FBgn0039808 FBtr0085716,FBtr0085717 1 2 2 118 3R 26705167 26705185 CACAGAGCCCTATGTCGAG 59 26704956 26705085 TGTTGGTGGACTTTGAGGG 59 NA Drosophila melanogaster 61 CG1340 FBgn0039797 FBtr0085699 2 1 1 93 3R 26552860 26552940 ACCTACAACTTTAACCGATCC 57 26552995 26553013 TTCCATTGAAGTTCCGCTG 58 NA Drosophila melanogaster 61 CG2217 FBgn0027544 FBtr0085630 3 1 1 82 3R 26247246 26247265 GGAATGAAGGAGACAGGAGG 59 26247074 26247203 TCTTCCTCTGGTATTGGAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595 1 1 3 68 3R 25865230 25865250 AAGTATCTGGTCACATTGCTG 58 25865116 25865200 ATCAGTCGTAGTCCAACCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 RpS28a FBgn0039739 FBtr0085601 2 1 1 89 3R 25848278 25848296 GTGGTCGAGATCCTTGGAC 59 25848207 25848225 AATAATCTGGCGGCTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089927 3 1 2 88 3R 25684431 25684505 ATGACAATGATCGTGGCGA 59 25684361 25684380 TTGATTAGCGTCCTGTGGAG 59 NA Drosophila melanogaster 61 CG18731 FBgn0042213 FBtr0085459 1 1 1 90 3R 25550883 25550968 CTCGATACATCAGTTTCAAGGA 58 25551019 25551037 TTTCCTCTACACTGGGAGC 58 NA InUTR Drosophila melanogaster 61 Rpn2 FBgn0028692 FBtr0085385 1 1 1 94 3R 24981684 24981702 TTCTTCCGTCAGCTGTACG 59 24981758 24982036 GCATCAATAATACCCTGAGCC 59 NA Drosophila melanogaster 61 Gfat2 FBgn0039580 FBtr0085297 1 1 1 137 3R 24163696 24163716 ACATTAGGACTGTCCTCAAGC 59 24163377 24163597 GCTCCTTGACTTTCAGTGC 59 NA Drosophila melanogaster 61 Mst98Cb FBgn0004171 FBtr0085278 1 1 1 63 3R 24118752 24118770 GTATTCCACCACCCTTCCC 59 24118797 24118815 TTCTTGCAGATCATGCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34353 FBgn0085382 FBtr0112563 2 1 1 80 3R 23630155 23659631 CACTTTGAGAGCGTGTCTG 58 23630093 23630113 GAATTTGAATGTCTCCGAACG 58 NA Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 3 1 1 136 3R 23516580 23517465 AGGTCTCGTTTCCCTTCAG 59 23517565 23517583 GTCCAGCAGTCTATTGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG3368 FBgn0039508 FBtr0085163 3 1 1 61 3R 23111736 23111812 GGTTAACGTTGAAGGGCTG 59 23111836 23111855 CGTTTGCAATTGGTAACACC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5882 FBgn0039490 FBtr0085109 2 1 1 80 3R 22944726 22944806 GAGTAATAGAGGGTGCCTGG 59 22944849 22944867 GCAGACTTAGGACCTCGTC 59 NA Drosophila melanogaster 61 CG6403 FBgn0039453 FBtr0085044 2 1 1 135 3R 22561814 22561974 CACCATGCTGAAAGCACTC 59 22561697 22561715 CTTCCTGATATCCTCGCCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ald FBgn0000064 FBtr0084995,FBtr0084994,FBtr0114544,FBtr0085001,FBtr0084999,FBtr0085000 1 6 6 153 3R 22083061 22083079 GTCTACCTGGAGGGTACTC 57 22082834 22082852 CTCCAGACAGGAAGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 1 2 2 82 3R 21882158 21882176 AAATCGATGTCAGCGATGG 58 21882034 21882112 TTCCAGAACCTTCTGAGCT 58 NA Nonspecific Drosophila melanogaster 61 E(spl) FBgn0000591 FBtr0084961 1 1 1 71 3R 21866399 21866418 CGTCTACAAGAACTTGCAGC 59 21866452 21866470 CAGTCCATCGAGTTCTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHm3 FBgn0002609 FBtr0084958 2 1 1 60 3R 21848060 21848079 GATCAGATTACCCAGGTCCT 58 21848102 21848120 TTATCTTGCGCCCAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983 1 1 2 82 3R 21751612 21766986 TTTATGAGACCGAACAGTTTGC 59 21751551 21751570 CATCACGAACAGAACAGCTG 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113384,FBtr0084928,FBtr0113388,FBtr0113385,FBtr0084927 3 7 7 80 3R 21527166 21527255 GTAGCAAGCGTCATCTATGTC 59 21527106 21527124 GTGGTAGACGGGATTCTCG 59 NA Drosophila melanogaster 61 tankyrase FBgn0027508 FBtr0084890 2 1 1 82 3R 21480669 21480688 GTATGTGTACGGAATTGGCG 59 21480538 21480625 GCAGCAATTGTCTAGGACAC 59 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 3 2 2 80 3R 21159690 21159881 TCAAGGCAGTGGTACTCTC 58 21159628 21159648 ACGATTTACTACACTGATCGC 58 NA Drosophila melanogaster 61 CG31097 FBgn0051097 FBtr0290052 3 1 1 194 3R 21122484 21122506 GGATCTGCTTATGCTGATAATCC 59 21122253 21122332 GCAAAGAATGCAGAGAAAGTG 58 NA Drosophila melanogaster 61 CG13658 FBgn0039315 FBtr0273361 1 1 1 111 3R 21113667 21113686 TCATCCGAGATCGTTATCCT 57 21113759 21113836 TTAAGAAAGTCAGGTCGCTC 57 NA Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 2 2 2 134 3R 21085147 21085227 TCTCACAGACCTACCAATCC 58 21085323 21085342 CATAGCACACGATGTACCAG 58 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 1 3 3 83 3R 20863985 20864006 GTTCAACTTCAAGGAGAATTGC 58 20862430 20863944 CTATATGAATCATGGTTGGCGT 58 NA Drosophila melanogaster 61 CG6695 FBgn0039215 FBtr0089916 1 1 2 122 3R 20483310 20483328 TAGTTCCGCTACCGAAACC 59 20484125 20484230 TCGGCTTTATATTGCCGGT 59 NA Drosophila melanogaster 61 nAcRalpha-96Aa FBgn0000036 FBtr0084619 3 1 1 95 3R 20238296 20238316 ATGGAATCCGGATGACTATGG 59 20233212 20238240 CCATCGGCGTTGTTATAGAG 58 NA Drosophila melanogaster 61 CG13616 FBgn0039200 FBtr0084618 3 1 1 183 3R 20219088 20219169 TAACATGGGTTTCAATGGTCG 59 20219308 20219332 GTAGATTCGATCATACTGATGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 Acp95EF FBgn0002863 FBtr0084561 2 1 1 63 3R 20054703 20054721 CGGATATCAACATGGCCTC 58 20054810 20054828 AGGGATAGAGCTACAACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13605 FBgn0039150 FBtr0300705 1 1 1 87 3R 19936538 19936556 AAACTGCTGACAATGCTGG 59 19936255 19936487 ACACATAAAGCCTAGCCCG 59 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 1 2 2 87 3R 19821617 19821636 TATTTAAGTCGCGTCTGCCA 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 CG31468 FBgn0047351 FBtr0084473 1 1 1 72 3R 19525910 19525928 AAAGCATGTCGTGCAATCG 59 19525796 19525814 TTAAACCCAAAGGTGCTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir94g FBgn0039079 FBtr0273202 1 1 1 60 3R 19311158 19311179 TTAGCCTGATTCTGTTTACCTG 58 19311198 19311218 AATCCCAGCCAGTAGTTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31515 FBgn0051515 FBtr0084429 1 1 1 60 3R 19214565 19214585 CAATCTCATCTACTTCACGCT 58 19214525 19214546 CTTTCCAAATACTTCGGTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 1 2 2 80 3R 19057608 19057628 TTCCAGTCACCTATGTGACAG 59 19057479 19057568 GCACATTGAAGGTTACATCCA 59 NA Drosophila melanogaster 61 CG33099 FBgn0053099 FBtr0084288 1 1 1 80 3R 18355700 18355771 CAGAGGACAAGATCAAAGCTG 59 18355640 18355659 GTCTGTAACGATCCTGAACC 58 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515,FBtr0299516 2 2 2 85 3R 18239171 18239254 CAGTCCAAGACGTAACTATCGA 59 18239300 18239318 TCATGTTGAGGCTGGAAGG 59 NA Drosophila melanogaster 61 lbl FBgn0008651 FBtr0084092 2 1 2 179 3R 17236943 17236961 GAACATATTTGCCACGCGT 59 17236494 17236800 AACCAAGTGATGACCTGTG 57 NA DesignRelaxed Drosophila melanogaster 61 bap FBgn0004862 FBtr0084087 2 1 1 254 3R 17215146 17215164 CTTTGGACATGAGACGCTG 58 17215503 17215521 AGATCTTCACCTGGGTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 ppan FBgn0010770 FBtr0084012 2 1 1 84 3R 16942280 16942298 CATCTTCAACAAGGCCTCC 58 16942344 16942426 CTGGTGAACCTTGAAAGTCAG 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 1 3 3 80 3R 16562580 16562598 AAGTTCCCTAGATGGGAGG 57 16562639 16562715 CAGCATTGACATTATGAGTTCG 58 NA Drosophila melanogaster 61 CG10877 FBgn0038804 FBtr0083950 3 1 1 60 3R 16388953 16388971 GAAGTCGACCTGTTGTCCA 59 16388911 16388929 TCAGGTAGTTGCTACCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31213 FBgn0051213 FBtr0083824 3 1 1 85 3R 15801129 15801151 GGATGGAATCTATCTCAGTTTGG 58 15801193 15801590 TCCCAAGTACATTAACTCCTGG 59 NA Drosophila melanogaster 61 CG4783 FBgn0038756 FBtr0083823 3 1 1 114 3R 15774257 15774333 CCAGCAAAGCTTTATTAGATCC 57 15774407 15774426 ATTCTGAGTAACCACCTTGG 57 NA Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083689,FBtr0083688 2 2 2 91 3R 14503208 14503226 AAAGGTGAAACATGCAGGA 57 14503001 14503089 CAGATGATCCTGGATTACCTG 57 NA InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0290210 3 1 5 90 3R 14411780 14412009 CTTTAATCCGAGGTGGCAC 58 14412061 14412081 TTCCTGTATCCTTCGGATCTC 58 NA InUTR Drosophila melanogaster 61 CG7678 FBgn0038613 FBtr0083658 2 1 1 138 3R 14215159 14215297 GTTCCGTGATTTGAATGCGA 59 14215040 14215059 TAGATCGAGCACCTTGTGAC 59 NA Drosophila melanogaster 61 CG7998 FBgn0038587 FBtr0083563 1 1 1 80 3R 14052226 14052244 CTGAAGCAAGTGACGAAGC 59 14052286 14052469 GGTCACCTTGTAGTTGTTCTG 58 NA Drosophila melanogaster 61 CG12321 FBgn0038577 FBtr0083616 2 1 1 60 3R 14014300 14014319 TCTAAAGGACAAGCGTACCA 58 14014259 14014280 AATGCTCGGTATGATTACTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083397 2 1 2 113 3R 12905976 12905995 AATTTGTTTGTATCGGCGTC 57 12906071 12908396 TTGCACGATCTCTTGTAGC 58 NA InUTR Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083351,FBtr0083350,FBtr0083347,FBtr0083349 3 4 6 123 3R 12484784 12536292 ACTGGCTAGGTACAAATGGTC 59 12484681 12484699 ATCTCGATTCTCCGTCTGC 59 NA Drosophila melanogaster 61 CG10324 FBgn0038454 FBtr0083356 3 1 1 129 3R 12471660 12471751 AAGTGCATAAACACTGCCA 58 12471549 12471570 GGTCTGATCTAATTTCTTCCCT 57 NA Drosophila melanogaster 61 CG31287 FBgn0051287 FBtr0083256 1 1 1 131 3R 12029662 12029739 CCGTAAATTTGGTAACCAAGC 58 12029829 12029850 CATGTTCGTTATAAAGCTGCTC 58 NA Drosophila melanogaster 61 CG34274 FBgn0085303 FBtr0112469 2 1 1 86 3R 11558092 11558163 TGCTTTATCAAGTTACGCGA 58 11558212 11558230 AGCACGCAGATAATGTTCG 58 NA Drosophila melanogaster 61 CG5038 FBgn0038324 FBtr0083089 1 1 1 60 3R 11178114 11178132 GGTTTAATGATCGTCCCGT 57 11178156 11178174 CAATCACGAATCCTACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 1 2 2 60 3R 11093697 11093716 AGATGTACGAATGGTTGCTG 58 11093656 11093674 TATTGCCCTGGAACATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083057,FBtr0083059 3 2 6 110 3R 11068521 11070100 GATGTCTAAAGCTCCTGCTG 58 11070173 11070191 GTACGATTACCCTGGTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0112629 3 1 2 86 3R 10246553 10246572 CCACTTATTGTGGATGAGCC 58 10246621 10246708 CTCCTTGCTCATGTCTCCA 59 NA Drosophila melanogaster 61 Crz FBgn0013767 FBtr0082927 3 1 1 73 3R 10140818 10140836 GACTCACGGATCTCTACGA 58 10141082 10141100 TTGGAGCTGCGATAGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Kif19A FBgn0038205 FBtr0082912 1 1 1 80 3R 9938553 9938645 TATACTGCGGGATCTGACTC 58 9938492 9938510 GTTGTCGATTTGAGGCAGG 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082854,FBtr0082856,FBtr0082855 3 3 4 98 3R 9471504 9471522 CAGTTCGGACAACCAATCG 59 9468816 9468899 CGGAGTTCCTTCTCAGTCG 59 NA Drosophila melanogaster 61 CG12538 FBgn0038157 FBtr0082791 1 1 1 60 3R 9348956 9348974 CACAAATACTAGACGGCGG 58 9348914 9348935 AGTTGAATAATCCAACATGGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8773 FBgn0038135 FBtr0290037 2 1 1 80 3R 9123169 9123247 GAGGATCATTTGGATAACCGC 59 9123287 9123307 TTCAGTGAGACAGGATTCCAG 59 NA Drosophila melanogaster 61 CG14380 FBgn0038124 FBtr0300768 1 1 1 80 3R 9014575 9014593 TTATTCCAGGACCCGTCTG 58 9014700 9014719 GTAGAAGCGCAGTTAAACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5999 FBgn0038083 FBtr0302379 2 1 1 110 3R 8568638 8568714 TGGTACAAGGAAGTTTATGGC 58 8568548 8568566 AATAGGTCCTTCACTGGCC 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 3 2 6 153 3R 8522011 8522183 TAGTCATGCAGGTCCTGTC 58 8522297 8522318 ATGAACAGATTGATCATGGTCG 59 NA Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 3 2 2 107 3R 8497389 8497407 CTTTCTCAACACCGGAGGA 59 8497478 8497600 TCAACCAGACCAAACCCTC 59 NA Drosophila melanogaster 61 hug FBgn0028374 FBtr0082639 3 1 1 180 3R 8353584 8353604 GACTACAAAGAGCTGACAGAC 58 8353746 8354309 CATTACTCTGCAGCTGTCG 58 NA Drosophila melanogaster 61 trus FBgn0038055 FBtr0082634 3 1 1 133 3R 8283605 8283682 AGCTGTTGAGATATTCGCG 58 8283779 8283797 CAGCTTGGGAATCAGTGTG 58 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 1 2 2 98 3R 7834939 7835019 ATGATGAGATCTCGCGTGG 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 CG6830 FBgn0037934 FBtr0082439 1 1 1 88 3R 7508185 7508264 TTCTTGGAGGTCAGCACTG 59 7508115 7508134 ATCTGATCCGTATTCTCCGG 58 NA Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 2 2 2 110 3R 7326957 7329141 CCAATACTTCGGCCATCTG 58 7329215 7329233 GCAATAACCTCCCGATCTG 58 NA Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 1 1 1 61 3R 6995716 6995736 TCAGAGATGTGTTTATCCCAG 57 6995603 6995696 GCTCAGTTCGTTTATCAATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14695 FBgn0037850 FBtr0082335 2 1 1 60 3R 6704262 6704282 TGGCTGGGATATTAAGTTGTC 57 6704222 6704240 GATGTATCGCAGGTAGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL37 FBgn0261380 FBtr0302273 1 1 1 80 3R 6608747 6608823 GCTAAGAACTTGTATCCTTTGC 57 6608688 6608707 TTGGTGTTTGTTAAACACCG 57 NA Drosophila melanogaster 61 CG33630 FBgn0053630 FBtr0091607 2 1 1 99 3R 5888440 5888526 GTCCAAAGAAAGCAGTAGTAGC 59 5888586 5888604 AAGTGGGATCGATCTTCGT 58 NA Drosophila melanogaster 61 Fst FBgn0037724 FBtr0082101 3 1 1 60 3R 5471219 5471237 TCTGAGGATACCACTCAGG 57 5471177 5471195 TGGTGGATTCTTCAGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8301 FBgn0037717 FBtr0082073 3 1 1 91 3R 5410215 5410233 ATCTGAAGACCCTTCGCTG 59 5410287 5410951 ATAGGATGCAAAGACCTCCG 59 NA Drosophila melanogaster 61 CG8301 FBgn0037717 FBtr0082073 1 1 1 85 3R 5407833 5409188 GGAATCTAAAGATATCTCCCAACG 59 5409232 5409250 GAATGCGTTGATCGAGCAG 59 NA Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091947 3 1 2 60 3R 5181418 5182099 TAAATAAGGCGCACTAACCTC 58 5182120 5182139 CATCGCATCGAAGTATAGGA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9773 FBgn0037609 FBtr0081953 1 1 1 80 3R 4501233 4501309 TTCTGGGATACAATTGCATTCC 59 4501174 4501196 GAAACAGTAGAAAGATGATGGGC 59 NA Drosophila melanogaster 61 CG7352 FBgn0037581 FBtr0081842,FBtr0302314 3 2 2 156 3R 4174326 4174345 CAGCAAGTCCTAGAAATCGA 57 4174518 4174536 GATCCAACTCCTGTCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 2 2 2 76 3R 4171065 4171083 ATTCCTGTTCTTAGGGCGA 58 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9603 FBgn0040529 FBtr0081855 2 1 1 102 3R 4166490 4166649 ATGAACCTGTCGAGAGCTG 59 4166406 4166427 GGATCTCGAAGTATCCCTTCTC 59 NA Drosophila melanogaster 61 CG7443 FBgn0037577 FBtr0081837 3 1 1 127 3R 4150142 4150212 CCTCTGTCAAGACGAAACG 58 4150356 4150374 AACTACCGTGCAGTTACGA 59 NA Drosophila melanogaster 61 CG11698 FBgn0037572 FBtr0081833 2 1 1 60 3R 4137967 4137985 TGTACGATGCAAGATTCCC 57 4138008 4138027 TTCGAAAGAAGCAACATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11693 FBgn0037570 FBtr0081860 2 1 1 60 3R 4134875 4134893 CTTATGCAGCTCGACTGGA 59 4134833 4134851 GACAAGGTAGCCTTCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 1 2 2 91 3R 3979043 3979061 CACAACCACAACCCTTTGG 59 3975446 3978990 GACGATTGACATTGTGAAGCT 59 NA Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 1 1 1 60 3R 3638322 3638555 GGGTACAAGAGTTGGTCAC 57 3638576 3638597 ATCACACGAATCATAAACCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18268 FBgn0037520 FBtr0081772 1 1 1 101 3R 3629760 3629889 AATTAGAGGGCGTAAGTGTC 57 3629678 3629696 TTCCGGTGCTATCATTGTG 57 NA Drosophila melanogaster 61 Sas-4 FBgn0011020 FBtr0081569 2 1 1 154 3R 2978967 2979036 CCAAAGTGTTACCTTCCGC 59 2979154 2979172 ACTCCGACTTCTCACTTGG 59 NA Drosophila melanogaster 61 Ccp84Ae FBgn0004779 FBtr0081694 3 1 1 138 3R 2517286 2517424 TGGCAGCAAAGATTGTTATCG 59 2517168 2517187 GGATCAACCTCCTCCAACTC 59 NA Drosophila melanogaster 61 glob2 FBgn0250846 FBtr0301286 2 1 1 106 3R 2434386 2434405 GTTCACAATGGTGGAGAAGG 58 2434247 2434318 CGTTCCTCGTAAGGAAACTG 58 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 2 4 4 87 3R 2211842 2211860 AACAAGTACGACACCTGTG 57 2211911 2212066 TGTGATAGGGATGTGAGCA 58 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 3 2 2 83 3R 1494403 1494423 AAATCCGTATCTAACCTGGAG 57 1494184 1494358 TTTCGAGACTTTGAGCAGG 57 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078741,FBtr0078742 3 2 2 81 3R 1434218 1434239 CGAGCATCTGAACGATAATTCC 59 1433866 1434177 GTTTGTGACCTTCCCATCTG 58 NA Drosophila melanogaster 61 Hcs FBgn0037332 FBtr0078683 1 1 1 81 3R 1305231 1305249 CAATGTCCTGCCCATACTC 58 1305291 1305372 GTGTTCCGTCTTAAGATTATCG 57 NA Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 1 2 2 119 3R 1062886 1062962 ATGATGACATGAGCAGCGT 59 1062785 1062803 TGTACTGGCTTTGACCCTG 59 NA Drosophila melanogaster 61 Mms19 FBgn0037301 FBtr0078778 2 1 1 98 3R 1061365 1061383 AGCAGGACACGTATTTCCA 59 1061445 1061577 CAATTCGCACTTGCATGGT 59 NA Drosophila melanogaster 61 CG12007 FBgn0037293 FBtr0078842 3 1 1 60 3R 955051 955071 CAATCCTGCCTAGATCTTCTG 58 955092 955111 CACTTGTTAGTAGGGTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0078837 2 1 2 207 3R 733644 733667 GGATAAGCTTAATGATGTACCAGC 59 733833 733979 GTTCATCAGCTTGGTCACG 59 NA DesignRelaxed Drosophila melanogaster 61 CG9769 FBgn0037270 FBtr0078892 1 1 1 60 3R 539111 539130 CCAGCTGCTAGACCTTATCC 59 539070 539088 CATCTGAGTGAACTGCTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18271 FBgn0037263 FBtr0301296 1 1 1 81 3R 467720 469273 GAACTCCTACGACCCACAG 59 469316 469336 CAAATAGACGCCGTAGAAGTG 59 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536,FBtr0113188 3 2 2 88 3L 22729603 22729621 TGGCTGTACGATCATGAGG 59 22729075 22729554 TTAACCTTTGGGTGACAATGTC 59 NA Drosophila melanogaster 61 Act79B FBgn0000045 FBtr0078478 1 1 1 80 3L 21979360 21979743 ACTACCATGTATCCAGGTATCG 59 21979781 21979802 GATCTTGATCTTGATGGTGGAC 59 NA Drosophila melanogaster 61 CG14565 FBgn0037129 FBtr0078452 1 1 1 66 3L 21737097 21737115 TTACATGAGGATAGCGCCG 59 21737049 21737067 TGGGTGTTGTACTCAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14572 FBgn0037128 FBtr0078434 1 1 1 60 3L 21734822 21734840 ATAGACCACAAGGTCGCTC 59 21734862 21734882 CCTTCAATGACCTCTACTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 3 2 2 141 3L 21626128 21626146 AACTCTGGTGTCATCACTG 57 21625929 21626026 GCTGTCCATATCATTATACTGC 57 NA Drosophila melanogaster 61 CG7202 FBgn0037086 FBtr0078393 1 1 1 98 3L 21485278 21485685 TATACACAGAGCGTCCTGG 58 21485198 21485216 CAAACTGGTAGGTGCTGTC 58 NA Drosophila melanogaster 61 Neu2 FBgn0037085 FBtr0078394 3 1 1 60 3L 21482133 21482154 GTCCACTCACTTGAAATCACAC 59 21482094 21482112 AGATTTGCAAGGACCTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 3 3 3 133 3L 21429090 21429108 CCATGTGAAGATCCACACG 58 21429265 21429286 TGATCTTAACAGGAACGTAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 sa FBgn0002842 FBtr0078401 1 1 1 80 3L 21399731 21399749 GGCATCCAAGAACTGTGAG 58 21399606 21399687 ATCTCACGGAATTTGCCAC 58 NA Drosophila melanogaster 61 CG12984 FBgn0037042 FBtr0078286 2 1 1 81 3L 20985189 20985207 AGCTTCTGAAGATGCTGCA 59 20985252 20985704 TCCAATTCGTTCACGACCA 59 NA Drosophila melanogaster 61 CG33286 FBgn0053286 FBtr0113459 1 1 1 80 3L 20964098 20964174 AAACATCGGCAACTTTACGG 59 20964037 20964058 GAATCCTTATTTCGCACCTCTG 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 3 2 4 105 3L 20764865 20764883 AATTGGCGACTTTAGCTGC 59 20764952 20765710 TTTGGCCTGTGATAGTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4042 FBgn0037018 FBtr0078279 3 1 1 60 3L 20763605 20763625 ACATGGAACTTTACTACGAGG 57 20763565 20763584 AGGAACTTAAGGGAGTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL15 FBgn0036990 FBtr0078227 2 1 1 115 3L 20429005 20429094 AAACAGAATGACAAGCGCG 59 20428908 20428926 TGATTGCCCGTTTCATAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5282 FBgn0036986 FBtr0078233 2 1 1 125 3L 20418321 20418339 TTCGTCTCGATTACGAGCC 59 20418162 20418232 AAAGAGCATGGTCTGTCCA 59 NA Drosophila melanogaster 61 CG32225 FBgn0052225 FBtr0074845 2 1 1 155 3L 20297928 20297946 TTCATGTTCAAGGACAGCG 58 20297734 20297810 TTTGAAGTATCTCCAACCGC 58 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 2 2 2 84 3L 20221373 20221391 GTTTCACGATCTCCATGCC 59 20221438 20221529 GAGGTACACATCGCTAGGTC 59 NA Drosophila melanogaster 61 CG42674 FBgn0261556 FBtr0302715,FBtr0302714,FBtr0302712,FBtr0302713,FBtr0302716 1 5 5 80 3L 20147634 20147719 CCATATAAGATATACTGTGCGGAG 58 20147577 20147598 GGTGAATAAGGCATTGTTATGG 57 NA Drosophila melanogaster 61 CG8004 FBgn0036920 FBtr0074915 3 1 1 87 3L 19921370 19921461 TCTACCAGCCGTATGAAGC 59 19921301 19921319 AGGTTGCACATCTTCAGGT 59 NA Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 3 2 3 111 3L 19881569 19881649 CTGAAGCCGAATAACGACG 59 19881476 19881494 TCTTCTTGCGACCCTTCTC 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 1 5 5 80 3L 19795361 19795441 GGCATGTATTTGTGGTACGA 58 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 Cpr76Bb FBgn0036879 FBtr0074933 1 1 1 60 3L 19513045 19513065 CCAAGTACCAATTCGACTACG 58 19513087 19513105 CACTGGCTCTTCTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir75d FBgn0036829 FBtr0075073 3 1 1 80 3L 18901884 18902135 CATTCGAAGGCAACTACGC 59 18901822 18901840 TTGGGCTTCTGAGGAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0302322,FBtr0075077,FBtr0075078 3 3 3 90 3L 18872673 18872691 ATAGTGCCCGAGAAGATCG 59 18872551 18872622 TAATGCAGCTCTTTAAGCTCTC 58 NA Drosophila melanogaster 61 bora FBgn0259791 FBtr0075108 2 1 1 93 3L 18616142 18616160 TTACACCTGCCACTGATCG 59 18616275 18616293 AGACCTCGTCAATGTTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG13699 FBgn0036781 FBtr0075134 1 1 1 86 3L 18150172 18151128 ATAACCAATTTCCTCGCTGG 58 18150105 18150123 CTCTCCACCACTCAAACCA 59 NA Drosophila melanogaster 61 CG7341 FBgn0036777 FBtr0075124,FBtr0075123 1 2 2 118 3L 18106215 18106233 GCTTACTGCAATAAGCGTG 57 18112924 18112942 AGATCAGGGTGATCCTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185,FBtr0075186 2 2 2 95 3L 17716300 17716318 CACGATTTCATGCCGATCG 59 17716377 17722693 GTGGCGTAAACATCAGCTG 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075198,FBtr0075200 2 2 3 179 3L 17636817 17637999 TTGCAACACCGTAAAGGTC 58 17636656 17636675 CAAGGCGACATGTTCATACC 59 NA InUTR Drosophila melanogaster 61 CG16793 FBgn0036712 FBtr0075242 3 1 1 80 3L 17337270 17337290 CCTCTTCTGGGACAATACCTC 59 17337069 17337233 ATCTTCATATAGCTGTGTACCTGG 60 NA Drosophila melanogaster 61 CG6497 FBgn0036704 FBtr0075250 1 1 1 60 3L 17246809 17246827 ACAGCCTACTTGCACTACC 59 17246767 17246785 AACGCTTCCAGTACATGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 1 2 2 129 3L 16854335 16854411 GGCCACACTAATTACAGGT 57 16854501 16854522 GTAATACAACATATTGCCTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9715 FBgn0036668 FBtr0075330 2 1 1 84 3L 16838602 16838680 TGAGTGATCTTGAGGAGATGG 59 16838726 16838744 AATCCATCGCTGTAGTGGA 58 NA Drosophila melanogaster 61 CG13050 FBgn0036591 FBtr0075478 2 1 1 84 3L 16272161 16272302 GACTGCTACTCATTACAATCGC 59 16272098 16272116 GACGGAGATGGTTCTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33687 FBgn0053687 FBtr0091667 1 1 1 90 3L 16191422 16191443 CAAACTTAAATCATACCTGCCC 57 16191564 16191582 GGTACGGGAAGATATCGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CkIIalpha-i1 FBgn0015025 FBtr0075504 2 1 1 165 3L 15810266 15810344 AAATTGATGCTGCTATCCTGG 58 15810468 15810489 TCCAACTTGATCTGAAATGCAG 59 NA Drosophila melanogaster 61 CkIIalpha-i1 FBgn0015025 FBtr0075504 1 1 1 164 3L 15810266 15810344 AAATTGATGCTGCTATCCTGG 58 15810468 15810488 CCAACTTGATCTGAAATGCAG 57 NA Drosophila melanogaster 61 Eig71Eb FBgn0004589 FBtr0075571 2 1 1 70 3L 15643376 15643457 TTGTATATTGACCCTTGAGCGA 59 15643488 15643506 TTTATTGTGCAAGGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 obst-H FBgn0053983 FBtr0100028 3 1 1 85 3L 15521824 15521845 AATGCACTGTGATAATGAGCTG 59 15521696 15521778 GATCTTCGAAGGCACACTG 58 NA Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 2 1 1 79 3L 15520876 15520894 GTTGATGGCTTTCTGCTGG 59 15520586 15520833 AAGAGTCCACCACAAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Best4 FBgn0036491 FBtr0113172 1 1 1 80 3L 15293064 15293082 TACATGGGTTGGCTCAAGG 59 15293124 15293237 TATCCAGTTGAGCTCGAAGTC 59 NA Drosophila melanogaster 61 CG6945 FBgn0036476 FBtr0075657 3 1 1 166 3L 15086420 15087361 AAGGTCTTCGTTCGGATCC 59 15086272 15086292 GAGATTGTGCATAGAGTTGCT 58 NA InUTR Drosophila melanogaster 61 Reck FBgn0036463 FBtr0075671 1 1 1 80 3L 15004342 15004363 TACTAGTGAGGCAATCGATAGC 59 15001081 15004307 GTGAAGATATCATATGATTCTCCGG 59 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0110825,FBtr0075695 3 2 2 86 3L 14858470 14858826 ATCCTGACAGTTAAGGAGCT 58 14858875 14858893 GAACACATCACTCGACTCC 58 NA Drosophila melanogaster 61 CG32121 FBgn0052121 FBtr0113424 1 1 1 83 3L 13410948 13411038 AGAATGTTCGGTATGCCTG 57 13410883 13410901 GATGTCGGTAGCTAACGTG 58 NA Drosophila melanogaster 61 sens FBgn0002573 FBtr0075862 1 1 1 80 3L 13390159 13390413 ATACATACCGGCGAGAAGC 59 13390097 13390116 CATATGCGTGATCAGGTTGG 59 NA Drosophila melanogaster 61 CG32118 FBgn0052118 FBtr0075889 1 1 1 60 3L 13091354 13091374 GCCATTGATGTGATACAACTC 57 13091394 13091414 GAAGACTACTAGGGTTTCGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tral FBgn0041775 FBtr0075959 2 1 1 260 3L 12511919 12511937 ACAATTATCGCATGGGTGG 58 12512161 12512252 ACTATTGTGAAACTGCCGC 58 NA DesignRelaxed Drosophila melanogaster 61 l(3)j2D3 FBgn0011335 FBtr0075991 2 1 1 81 3L 12110256 12110352 GTCGCGAAAGTATAGAATAGAAGC 59 12110389 12110410 TTGAAGCTTATGAAAGTGCTCC 59 NA Drosophila melanogaster 61 CG7264 FBgn0036214 FBtr0076035 1 1 1 169 3L 11822660 11822734 GCTCGACCTAGAAATGCTG 58 11822867 11822885 TAAGATCCGAGTCCACCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 1 3 3 80 3L 11622539 11622558 GTGACGTTCAAGACGTACAG 59 11622598 11622695 TTTACTGATGATGTCCTTGACG 58 NA Drosophila melanogaster 61 Vha16-2 FBgn0028668 FBtr0076091 3 1 1 60 3L 11468309 11468327 GATTGGTGGTATCCGTCCT 58 11468346 11468369 CTGTCTTCCATCGTATAATCATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 E(z) FBgn0000629 FBtr0273338,FBtr0076279 1 2 2 80 3L 10628780 10628860 AACTCCATTATGGCTGGCA 59 10628718 10628736 GACCCGATAAAGTGCTTGG 58 NA Drosophila melanogaster 61 CG14168 FBgn0036044 FBtr0076374 2 1 1 132 3L 9786730 9786748 GATTTACCCGATCGTCCGT 59 9786489 9786634 TTGGGAAGATCCCAAGGAC 59 NA Drosophila melanogaster 61 CG6749 FBgn0036040 FBtr0076410 3 1 1 80 3L 9725534 9726047 ACTGATACAGTTGGACGTG 57 9725472 9725490 GAGCTCAATCTATTCCCGC 58 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 1 3 3 81 3L 9581537 9584351 CAAGAAAGAGCACTTGGCC 59 9584393 9584414 CGATGGCATTATATCCAAGTGG 59 NA Drosophila melanogaster 61 CG32038 FBgn0052038 FBtr0076462 2 1 1 93 3L 9445095 9445114 GTGGAATTCGCCAGTTACTG 59 9445258 9445406 AAATGACGTGTATCGTTATCCG 59 NA Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 1 1 1 67 3L 9347871 9347950 ATTATGGTTGCTCAGGCGA 59 9347979 9347999 ATTAAAGATGTTCCACCTCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4484 FBgn0035968 FBtr0076503 2 1 1 111 3L 9196868 9197211 ATGAAGTGGTTCGGAACCA 59 9196775 9196794 TGCTGAATACCAAGACTCCC 59 NA Drosophila melanogaster 61 Doc1 FBgn0028789 FBtr0076522 1 1 1 92 3L 9034647 9034665 CCATGCAAGAGCTAATGGA 57 9034721 9035141 GAAAGGGATCTGGAATCCG 57 NA Drosophila melanogaster 61 CG6662 FBgn0035907 FBtr0076652 2 1 1 98 3L 8517116 8517137 TCAAGTGTTTCTATCTGGATGG 58 8516984 8517058 GTTTGGCCTCATTGTATAGC 57 NA Drosophila melanogaster 61 DNApol-alpha50 FBgn0011762 FBtr0076603 2 1 1 80 3L 8336225 8336300 TATGGATCATCCGAGGATGC 59 8336338 8336361 GAGGTAACGTATGTAGATATCGTC 58 NA Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 1 3 3 80 3L 8270065 8270540 AGCTGTACGAAACCGATCC 59 8270584 8270602 AGTTGGTGTATTTGCGCAG 59 NA Drosophila melanogaster 61 MED24 FBgn0035851 FBtr0076694 2 1 1 80 3L 8186314 8186336 GATGTATACAATCTGGCTGACTG 59 8186374 8186452 CAGGTAGTTAAGAACCAACGG 58 NA Drosophila melanogaster 61 CG8111 FBgn0035825 FBtr0076770 3 1 1 89 3L 7907091 7907171 CTTCGTCTGCTGTTTGTACG 59 7907021 7907040 AAATGCGATGAGTAGGTTGC 59 NA Drosophila melanogaster 61 CG8629 FBgn0035742 FBtr0076925 2 1 1 73 3L 7121236 7121256 AGTTCTACGGTCTCTTCAAGC 59 7121183 7121201 CTTGAGATCCAGAATGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0300937,FBtr0076940 3 2 2 175 3L 6948259 6948490 CAATGAACATGTACAACGGAC 58 6948104 6948122 ATTGAAACCTGGGTATGGG 57 NA InUTR Drosophila melanogaster 61 CG13297 FBgn0035685 FBtr0077020 2 1 1 80 3L 6150237 6150255 ATCAAGCTGGGAGATGTCG 59 6149984 6150196 AGGAAGAGTGTAGTTGAACTCG 59 NA Drosophila melanogaster 61 Cpr65Aw FBgn0052404 FBtr0077023 3 1 1 83 3L 6135407 6135425 CAAATGCCACCGATACTGC 59 6135277 6135361 TTGTCTCGAATGAGAAGGCA 59 NA Drosophila melanogaster 61 sinu FBgn0010894 FBtr0300070 2 1 2 62 3L 5553947 5553965 ACTGTGTTAACCCTGGTGG 59 5553728 5553921 TTTCCTCTTGGTTGGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 3 1 1 108 3L 5227731 5227749 CCAACCGTATGAGAGGAGG 59 5227821 5227887 TTATCCAGTCGCACCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7514 FBgn0035567 FBtr0073367 2 1 1 60 3L 4688190 4688209 GTTATCACCCTCTGGAAAGG 57 4688149 4688167 CCATGTTGACGATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 axo FBgn0261546 FBtr0302646 1 1 1 80 3L 4673380 4674964 TCAATTAAGACTTTGCCGTGAG 59 4673321 4673341 TTAACGTTGTGATAGACGAGC 58 NA Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 3 1 1 85 3L 4471710 4471839 GCCGGTCTAAGATATTATTCGA 57 4471883 4471903 TTGTAGTTGTAGCCAGATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15023 FBgn0035548 FBtr0290225 3 1 1 60 3L 4461104 4461124 ATTTGTGATTACCTCGACGAC 58 4461064 4461082 TTTGGGTGGCAGATAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1316 FBgn0035526 FBtr0073233 2 1 1 95 3L 4284968 4284986 TTACTGCCAAATCATGCGC 59 4285104 4285183 AGTTTGTCCTTGGCATAAATGG 59 NA Drosophila melanogaster 61 CG1311 FBgn0035523 FBtr0073232 1 1 1 80 3L 4279327 4279403 GGATTAGCTTTGCTCATTTCCA 59 4279442 4279462 AACACAGATGATCCAGGAGAC 59 NA Drosophila melanogaster 61 Teh3 FBgn0040697 FBtr0073257 2 1 1 60 3L 4183980 4183998 GGACAAGGTCTACCTGTCG 59 4183938 4183956 CACCTCCTCCAGAGTTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 2 2 2 88 3L 4154450 4155248 CTTGAATCGGGAAGCTGTC 58 4154380 4154399 TTTCCGACAGATCAAATGGC 59 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 3 3 3 85 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023615 4023697 CCAGTCCAGTAATCACTCCTC 59 NA Drosophila melanogaster 61 CG42456 FBgn0259933 FBtr0300240 1 1 1 83 3L 3319832 3319850 GATATCTGCAATCGCCGTG 59 3319897 3320524 ATGGGATTGCCTTCATCGA 59 NA Nonspecific Drosophila melanogaster 61 dro3 FBgn0052283 FBtr0073060 3 1 1 63 3L 3315064 3315084 CTTGCTGTAATGACCATTGTC 57 3315109 3315127 CAGATAGGCAATCACGTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14966 FBgn0035415 FBtr0073108 3 1 1 60 3L 3197210 3197229 CTAGGTCTTCGAAAGAGCGA 59 3197169 3197188 TTATCTTGTTTCGCGATCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 2 3 4 81 3L 3054408 3054428 GCATAGTATTTCGTCTGGTGC 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072986,FBtr0072988,FBtr0072987 1 3 4 80 3L 3054409 3054430 CATAGTATTTCGTCTGGTGCAG 59 3054466 3054548 CCATCAACCCTAATCATATGAAGC 59 NA Drosophila melanogaster 61 pgant6 FBgn0035375 FBtr0072972,FBtr0072973 1 2 2 87 3L 2784494 2785006 TGCACAAGAACTACAAGCG 58 2785057 2785075 CTCTCGTACAGACCGTCTC 59 NA Drosophila melanogaster 61 yellow-g2 FBgn0035328 FBtr0072883 2 1 1 132 3L 2277437 2277513 TGGACGCATCTTGGATCTC 60 2277609 2277627 CACGAATGTGGAGTTCGTG 59 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072910,FBtr0072909 2 2 2 81 3L 2236099 2236121 CAGGAAATATCCGAGATTAGCTG 59 2235963 2236058 CTTCGTTCACCTGTATGGC 58 NA Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717,FBtr0300715,FBtr0300714 3 4 4 178 3L 1877653 1877772 TCACATTATCTGGTGCAATGTC 59 1877425 1877443 AGTAGTTCTGTGCCTCACG 59 NA Drosophila melanogaster 61 CG13931 FBgn0035258 FBtr0072802 3 1 1 172 3L 1701893 1702301 TGTCCAAACTGTCATCTGGT 59 1701740 1701758 TAGCACCTTGTACACGGTG 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 1 4 4 110 3L 1551790 1551871 TATGTGGACGAGATCGTCC 58 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 1 10 10 84 3L 1498343 1498361 CAACAAACAGGCCATGGAC 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 LysS FBgn0004430 FBtr0072631 3 1 1 94 3L 1227916 1227934 CAGCACGAGAGTGACTACC 59 1227990 1228010 CAGTACAGATCGTTGATCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysD FBgn0004427 FBtr0072634 3 1 1 64 3L 1210950 1210970 GGAATCTTCCAGATCAACGAC 58 1210906 1210924 TCGTTGTAGGAGAAGCGAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 1 1 1 60 3L 1206428 1206544 AAGAGTCGTTCGGCTAGAG 58 1206568 1206586 GGAGTTCAATATCCACGGG 57 NA DesignNoJunction Drosophila melanogaster 61 bab1 FBgn0004870 FBtr0072642 3 1 2 93 3L 1099101 1099120 TGATCCGAGAGGAAGAAAGG 58 1040208 1040299 TACTGGTAGCTGTCTGCTG 58 NA Nonspecific Drosophila melanogaster 61 dpr20 FBgn0035170 FBtr0072594 2 1 1 82 3L 853837 853913 CGTTAATGCTCCGAAAGTG 57 853773 853791 GTAGCGTGGAATCGATCTC 57 NA Drosophila melanogaster 61 CG13901 FBgn0035164 FBtr0072596 2 1 1 60 3L 836872 836890 AAACCAGATATCCTCTGCG 57 836830 836848 TGTCGACATTCTTGAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 3 2 2 80 3L 709020 709097 AAAGATGAGATCAAGGAGACTG 57 708899 708917 CACATCGTCTTGACTGGTC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1389a FBgn0083046 FBtr0113525 2 1 1 64 2R 17221476 17221495 TAAAGAGATTCCGGCTAAGC 57 17221519 17221540 CTGAAAGTCTACTTTCCAAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33422 FBgn0053422 FBtr0086414 1 1 1 60 2R 15628263 15628281 ATACATCGGTTCTCGTCCG 59 15628221 15628239 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33430 FBgn0053430 FBtr0086422 1 1 1 60 2R 15625323 15625341 ATACATCGGTTCTCGTCCG 59 15625281 15625299 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg4 FBgn0083124 FBtr0300230 2 1 1 116 2R 4983088 4983107 TCTGTGATTACTAGGCGCTG 59 4983454 4983663 AAGACCGATCGTCTGTCTC 58 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072415,FBtr0072416 2 2 6 90 2R 20819715 20819787 GAAGCGATTCATGATCCGC 59 20819643 20819661 CGACTTAAAGAACCAGGCG 59 NA Drosophila melanogaster 61 pain FBgn0060296 FBtr0072417 1 1 1 82 2R 20811992 20812010 AGAAGGCACTCTCAACACC 59 20811868 20811949 CTTGTTGATGTAGTTCACCTGG 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0100299 1 1 3 98 2R 20758746 20758764 GAGTCACAGCAGCTTAGCT 59 20758879 20758897 GAAGGCACTAACACGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3650 FBgn0035070 FBtr0072380 1 1 1 62 2R 20736550 20736568 TTTCTCCTCCAGCTTACCC 58 20736594 20736612 GATTCTGGGCTGGATTTGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Orc4 FBgn0023181 FBtr0072425 1 1 1 91 2R 20684553 20684633 AAAGACAACGCTCATCAACTC 59 20684482 20684500 GATTACCGTCCAGGTGGAC 59 NA Drosophila melanogaster 61 CG3894 FBgn0035059 FBtr0300130 3 1 2 195 2R 20651142 20651160 TTGGTCTCACCGAACTAGC 59 20653242 20653313 CCAAGAAGGTTTCTGTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 betaTub60D FBgn0003888 FBtr0072270 1 1 1 110 2R 20193648 20198249 AAATCGGCGCTAAGTTCTG 58 20198323 20198341 TGTAGTAGACACTGACGCG 59 NA Drosophila melanogaster 61 CG3356 FBgn0034989 FBtr0072262 3 1 1 80 2R 20087197 20087274 GGTCTTCGAGTACAAACTACTC 58 20087315 20087333 TCTGCAGCCAACTTAAACC 58 NA Drosophila melanogaster 61 CG3253 FBgn0041706 FBtr0072251 3 1 1 81 2R 20003512 20003531 CTACATAGCAGTGGACAACG 58 20003574 20003649 CTCATAAACCTGGGAGTTCC 57 NA Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697,FBtr0299696 3 2 2 136 2R 19962578 19962725 CAGAGTACCTCCGAGACAC 58 19962824 19962843 TTGTGGAATTTGTAGCCTCC 58 NA InUTR Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697 3 1 2 81 2R 19963902 19963921 TGCAACAAGACTCTAGACTC 57 19963963 19964043 ACTTCTGAGCATAACATCCTC 57 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 2 2 2 80 2R 19937806 19937894 GATCCCAATGACATGATTACTTCC 59 19937927 19937951 CCACTTGTGATAGTAGTTATTCTGC 59 NA Drosophila melanogaster 61 Rrp4 FBgn0034879 FBtr0072111 3 1 1 94 2R 19443281 19443299 AGAACTACGACGGAGATCG 58 19443142 19443224 CAAAGATGTTCTGGACCTCG 58 NA Drosophila melanogaster 61 skpF FBgn0034863 FBtr0072022 1 1 1 60 2R 19346183 19346203 GTCATCAAATTGCAGTCCTCC 59 19346143 19346161 ACTTGGCAGTCTCGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yellow-d FBgn0041712 FBtr0072011 1 1 1 149 2R 19266796 19266868 CAGAGTGGCTATCACCGAG 59 19266981 19266999 ATGTATGTGTCGTTCGGGA 58 NA Drosophila melanogaster 61 CG13550 FBgn0034853 FBtr0072010 3 1 1 105 2R 19255881 19255900 TATGAGCTCTATGAGGGCAC 58 19256025 19256043 CCGTTCCAGTATCCATGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13541 FBgn0034841 FBtr0072001 2 1 1 106 2R 19172288 19172306 GAGACCCTTATCCAGCGAC 59 19172438 19172457 TCACGGGATATGTGGATTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9899 FBgn0034829 FBtr0071969 3 1 1 80 2R 19048153 19048259 GACAGCCAGAACCTATATGG 57 19048299 19048320 AGGATCATGTTGTAGTTGAAGG 58 NA Drosophila melanogaster 61 CG3215 FBgn0034825 FBtr0071974 3 1 1 87 2R 19016939 19016957 GACATATTCAAGTCGCCCA 57 19016811 19016891 CAATGATGTTCCTTAGAGTGGA 58 NA Drosophila melanogaster 61 RpL37b FBgn0034822 FBtr0071978 1 1 1 116 2R 18987789 18987807 GAAATCGAAGTGCTCCCAG 58 18987691 18987709 TTCTTGAGGTACCGCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9825 FBgn0034783 FBtr0071893 1 1 1 80 2R 18725374 18725450 ACTTTCCGGAATACGATTGG 58 18725493 18725511 ATTGCGTTAGGATGTAGCC 57 NA Drosophila melanogaster 61 CG13527 FBgn0034776 FBtr0071880 1 1 1 80 2R 18651479 18651498 TGACAATCACTATTGCGGAG 58 18651541 18651620 TTGGATTGTCCCATGACAC 57 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0302374 3 2 8 80 2R 18618365 18618386 CAATAGCGCCTATATCACTACG 58 18618235 18618329 GACTCGTAACCATTCTTACTAACG 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273314,FBtr0273318 1 5 5 80 2R 18595586 18595664 CACCAGATACTGCCTATCCA 58 18595706 18595725 GACTGATCGCTCTTGTAGAC 57 NA Drosophila melanogaster 61 Gp150 FBgn0013272 FBtr0071814,FBtr0071816,FBtr0071813,FBtr0071815 1 4 4 80 2R 18213222 18213296 CGAAGTCCAAGAGCAAATCC 59 18213337 18213357 CGTAGTCATATTGAGAGTCGC 58 NA Drosophila melanogaster 61 CG34369 FBgn0085398 FBtr0112594 1 1 1 82 2R 17855775 17855859 GCTACAATTCCTTCGACTACTG 59 17855902 17855920 ATCCAGCGGATGAACAGTC 59 NA Drosophila melanogaster 61 CG10795 FBgn0034626 FBtr0071609 3 1 1 73 2R 17271450 17271468 AGATCAACTGCACGGAGAC 59 17271330 17271413 GTGATAGCCATTCGTCCAC 58 NA DesignRelaxed Drosophila melanogaster 61 dom FBgn0020306 FBtr0301350,FBtr0071604,FBtr0071602,FBtr0071603 2 4 4 102 2R 17212593 17212611 AGTCCTCACTAGTCAGTGG 57 17212676 17212913 ACTTGAGATTGCGTATTCGT 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 1 5 5 96 2R 17204979 17204997 CTGTTGACGGAGATTTCGC 59 17205055 17205131 GGCGATCAGAAATGTAATCCA 58 NA Drosophila melanogaster 61 CG15657 FBgn0034595 FBtr0071635 3 1 1 89 2R 17035472 17035549 TTTCGAGCATTGAACAGGC 59 17035401 17035419 GAATCACCATTACCGGGTG 58 NA Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 2 2 2 80 2R 16764063 16764082 TAATTTATGGCGATCACGCG 59 16764123 16764776 TAAGCACCATAATTTCACCGG 58 NA Drosophila melanogaster 61 Gr57a FBgn0041240 FBtr0086241 1 1 1 101 2R 16573350 16573368 GAATCCCTAATGTCGTGGC 58 16573212 16573288 CAGAATCGATGTAAACAAACCG 58 NA Drosophila melanogaster 61 CG16742 FBgn0034529 FBtr0086227 2 1 1 81 2R 16511666 16511735 CCACTCAACAACCGTATTCC 59 16511779 16511797 CTGCCACTCTTTGGTACCA 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 3 10 10 80 2R 15298142 15298160 ACAAGGTGGATATGCAAGG 57 15298007 15298099 AATGGAGGACAAAGTGACTC 57 NA Drosophila melanogaster 61 CG7229 FBgn0034423 FBtr0086511 3 1 1 82 2R 15147563 15147635 CTCTAGCATGGCATCTTGC 58 15147681 15147699 CGGGATGCGGTATAAACTC 58 NA InUTR Drosophila melanogaster 61 CG15093 FBgn0034390 FBtr0086638,FBtr0086640,FBtr0086639 2 3 3 60 2R 14663630 14663648 GCCGAGATCATCAACTCCT 59 14663588 14663606 GCACAGGGTTGTAGATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5335 FBgn0034365 FBtr0086708 2 1 1 85 2R 14509317 14509335 CAATCTATCGCATCCGCTG 59 14509384 14509519 GGTTAATGTGGAACCTGGC 58 NA Drosophila melanogaster 61 CG30120 FBgn0050120 FBtr0299806 1 1 1 105 2R 14336284 14336302 CAAGGATCCCGAGTTCCTG 59 14336368 14336444 GATATTCAGCTTGTCCTTGCAG 59 NA Nonspecific Drosophila melanogaster 61 CG30118 FBgn0050118 FBtr0086724,FBtr0113360,FBtr0113361 3 3 3 83 2R 14319247 14319328 AGCTGAAATATTTGGTGGCC 58 14319183 14319205 GCAGATAATGATGTACGACATCG 59 NA Drosophila melanogaster 61 proPO-A1 FBgn0261362 FBtr0302291 2 1 1 80 2R 13776211 13776307 GGATACGTTGAAGATTCTTCTGG 59 13776153 13776171 CTCAATCATGTTGCCCAGG 58 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0086822,FBtr0113091,FBtr0086823 2 4 4 80 2R 13755980 13756000 CTCAAGTGGATAATTACCGCG 59 13755858 13755939 CGTCGTTGCAATCAAATCCA 59 NA Drosophila melanogaster 61 cyp33 FBgn0028382 FBtr0086945 2 1 1 85 2R 13432986 13433073 GATAATATGAATGACTCCGAGCTC 59 13433115 13433135 TTGAAACTGTCCTCCTTAACG 58 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0273341,FBtr0087010,FBtr0087009,FBtr0113378,FBtr0300958 2 9 9 93 2R 12955088 12955106 GCTATCCCATGTCCTCGTC 59 12954942 12955033 CTATAAGGTGAGTTGCTGCTG 58 NA Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051,FBtr0087052 2 2 2 60 2R 12843452 12843473 ATACTTTCTGCATATAGCCGAG 58 12843494 12843512 TGGATAGAAGGCCAACGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp53C14a FBgn0034152 FBtr0087082 1 1 1 72 2R 12636019 12636038 GATCGCCTTGTTACTAAGCT 57 12635914 12635932 GAGTTCCGAACTTATGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15711 FBgn0034122 FBtr0087167 3 1 1 60 2R 12251631 12251649 TTGAATTGGACAGAGCCAC 58 12251589 12251609 GGACAACGATCAGATAATCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8060 FBgn0034113 FBtr0087178 3 1 1 86 2R 12205930 12206015 CCAACAGAGGATGATATTGACTG 59 12205866 12205884 TAGGAACATCTCGCAGGTG 59 NA Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299972 2 1 2 89 2R 12179144 12179162 ACTTTCTGGGAAGAGTTCG 57 12179214 12179233 TGGCACTTACCTTAAAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JhI-26 FBgn0028424 FBtr0087139 1 1 1 87 2R 12178248 12178442 TTTCCTAAGTCGCGGTGAG 59 12178491 12178511 CAAACTCATGAGGAAACTGGC 59 NA Drosophila melanogaster 61 CG8314 FBgn0034057 FBtr0087268 2 1 1 119 2R 11878048 11878066 CTCATCACTGTTCCGTCTG 58 11877878 11877968 CGATATAGAAGGTGAAGAGCAC 58 NA Drosophila melanogaster 61 CG8249 FBgn0034045 FBtr0087310 3 1 1 101 2R 11733110 11733200 GATTTATGCTGGGTGTTGGT 58 11733028 11733046 TGCCCAGTATAAGACTGCC 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 2 3 3 91 2R 11587253 11587274 CCTTATATCGAAAGATCTCGCA 58 11587114 11587206 CTCGAGGAATCTAACATATTGCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 1 4 4 80 2R 11344303 11350806 TTGATATCGAGGAAGAAACGTC 58 11350847 11350865 TCTTGAGGAGCATCAGTGG 59 NA Drosophila melanogaster 61 CG8152 FBgn0034008 FBtr0087392 2 1 1 60 2R 11198379 11198398 GTGAGTTCTACAAGGAGGTG 57 11198338 11198358 GTACTTGGAAGGTTAGGTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10257 FBgn0033985 FBtr0087408 1 1 1 106 2R 10830585 10830712 CAATGGCAAGATGTACCGC 59 10831288 10831306 GTTTGAACATCCAGTCGCG 59 NA Drosophila melanogaster 61 ave FBgn0050476 FBtr0087439 3 1 1 81 2R 10640183 10640201 ATGTGCTCAAGTGGTATCG 57 10640245 10640467 CTTCCGGTTATATCGTGCTG 58 NA Drosophila melanogaster 61 CG12860 FBgn0033954 FBtr0087480 2 1 1 64 2R 10553761 10553779 ATACCCTACAAGCCAGAGC 58 10553715 10553733 TTGTCATCCAAACGTACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 2 1 1 102 2R 10090723 10090879 CCTCAGCAAGATGTTGGGA 59 10090639 10090657 CTCCGTCATGTGAATCACC 58 NA DesignNoJunction Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087582,FBtr0087584,FBtr0087583 3 3 3 84 2R 10037956 10038037 TGATTACATGGTTGTCGAGG 57 10037891 10037909 TAAACATGTGGGCATACGC 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0301593,FBtr0273224,FBtr0087619,FBtr0301592,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964,FBtr0301591 2 15 15 80 2R 9759648 9759722 CCTTGTTGAACCTGAAGCAC 59 9759587 9759605 TGAACTCCTTGTGGTCCTC 59 NA Drosophila melanogaster 61 EfTuM FBgn0024556 FBtr0087670,FBtr0301389 2 2 2 60 2R 9395952 9395972 ACAAGATCCCTGTGGTAAAGG 59 9395994 9396012 ATCTCGGGACTCTTGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18278 FBgn0033836 FBtr0087716 2 1 1 205 2R 9296747 9296765 ACCTACCTAACCGATCTGC 58 9296503 9296578 AACCAGTGCTTATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG17050 FBgn0033831 FBtr0087719 1 1 1 80 2R 9279071 9279092 TCAAGAGGAAAGTCACTATCAG 57 9278826 9279032 TCAAGATCATCCATATGCTCG 57 NA Drosophila melanogaster 61 CG4734 FBgn0033826 FBtr0087754 2 1 1 80 2R 9185214 9185304 CGATACTAAGACTCTAACCATTCG 58 9185157 9185175 TCATCGGTCATCAAGGTGG 59 NA Drosophila melanogaster 61 CG4714 FBgn0033819 FBtr0087756 2 1 1 88 2R 9139885 9139905 GAGTGAGACCTTGAGTATCGA 58 9139760 9139835 GATCGGTATTGCGTTCCTC 58 NA Drosophila melanogaster 61 sug FBgn0033782 FBtr0087789 2 1 1 141 2R 8816708 8816726 TGATCATGAAGGCTCGTGG 59 8816829 8817291 ACTCTATCGCAATCTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 bic FBgn0000181 FBtr0087783,FBtr0087782 3 2 2 61 2R 8758036 8758056 CAAGAAGCTGTCGGTAAACAC 59 8758076 8758097 CATCGTTCTTGATGATGTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087932 3 1 2 135 2R 8341322 8341340 AAGGACATTCAGGAGACGG 59 8352045 8352063 GATAGGCCTCAATGTGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 1 2 2 80 2R 8186569 8186651 TTTGGCAGTAAATTCGGACTG 59 8186509 8186529 TATGTAGGCCTCGAACTTCTG 59 NA Drosophila melanogaster 61 wash FBgn0033692 FBtr0087989 1 1 1 60 2R 8069065 8069084 AGTTCGGTGATTTACCAGAG 57 8069105 8069125 TGCACTATTATATCCTGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skpB FBgn0026176 FBtr0088020 1 1 1 64 2R 8027415 8027491 AGAGATGCCCATCATTCGG 59 8027369 8027387 CGATCTCCTGATCCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RnrS FBgn0011704 FBtr0088046 3 1 1 153 2R 7871807 7872333 GTACAAGAAGGCTGAGGCT 59 7871672 7871690 GTTCTCGTTTACGATGCCG 59 NA Drosophila melanogaster 61 ERp60 FBgn0033663 FBtr0088058 1 1 1 80 2R 7776003 7776087 GAGAACTTCCATGGTCTTGTG 59 7775943 7775963 GTAGTAGGCAGTGATCAAAGG 58 NA Drosophila melanogaster 61 CG13204 FBgn0033627 FBtr0088128 2 1 2 136 2R 7254591 7256056 ATAGGTCTTTCAGTGGAGGC 59 7256155 7256173 TCCATGTGATCTGCATGGG 59 NA Drosophila melanogaster 61 CG12384 FBgn0033624 FBtr0088155 1 1 1 132 2R 7246479 7246497 ACAACCAAATCTTGTGGCC 59 7245768 7245850 AATGGGTTGTGTCAGTCCA 59 NA Drosophila melanogaster 61 CG9062 FBgn0033607 FBtr0088181 2 1 1 80 2R 7169386 7169475 GTCATCTTTAGTGAAGTGGGT 57 7169326 7169344 CAGGGTACTTTCGCTATCG 57 NA Drosophila melanogaster 61 CG13229 FBgn0033579 FBtr0088206 2 1 1 88 2R 7028776 7028794 ATGCACTTCACCCAGATCC 59 7028491 7028725 TTCGGATGTCTGATAGCCAC 59 NA Drosophila melanogaster 61 CG12344 FBgn0033558 FBtr0088246 3 1 1 80 2R 6719031 6719135 GAGGATATGGACTTTAGAGTAGAC 57 6718974 6718995 GAATATGTCATCTGGGATCTCC 58 NA Drosophila melanogaster 61 Lsm10 FBgn0033554 FBtr0088248 3 1 1 60 2R 6708895 6708915 CTTTGATCACTTTATGGTGCG 58 6708855 6708874 CAAGTACGAAGGTATGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosbeta5 FBgn0029134 FBtr0088224,FBtr0088225 2 2 2 64 2R 6707681 6707699 ATCTGGCCAATCCCTACAC 59 6707788 6707807 CTGATTAAGGTTGTGCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460,FBtr0088262,FBtr0088263 1 3 3 80 2R 6321604 6321681 GAGCTGACATTGAGAACGTG 59 6321723 6321742 ACTGTATCACTGACGTCTGG 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088416,FBtr0088419,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 10 10 84 2R 5991901 5992226 GAGCAGTCAGAACGTTACG 58 5992271 5992292 TTCTTTCCTCATTTGAGAGCTC 58 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 3 4 4 102 2R 5880409 5880494 GGACAGAACTTCAGATTCCC 58 5880559 5880577 TGTAAAGATCATCGTCGCC 57 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0300920,FBtr0088381,FBtr0300919 2 4 4 84 2R 5782983 5783064 TTATCGAGCAAACTGAAGATCG 59 5783108 5783127 TTACTGGGCAGTTGATTCCT 59 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 1 2 2 72 2R 5703155 5703225 AAGATGAACTGGTTTGGCG 58 5703261 5703279 TTTGGTTACTCAAGTCCGC 58 NA DesignNoJunction Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0088475 1 1 2 122 2R 5701198 5702740 GGCTAAGGAATGTATCACCC 57 5703016 5703035 TCAGGAGATGCTTCATTTCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13954 FBgn0033405 FBtr0113059 2 1 1 80 2R 5257805 5257824 TTTGTTACTGCTCATGTGCC 59 5257642 5257765 GCTAACTGGACCATATCATCGA 59 NA Drosophila melanogaster 61 TXBP181-like FBgn0026326 FBtr0088599 1 1 1 80 2R 5176796 5176877 CAGCAACTATCGCATATCGAG 59 5176736 5176756 AAACAGTTCGATTCGTTGAGG 59 NA Drosophila melanogaster 61 CG13742 FBgn0033372 FBtr0300369 3 1 1 93 2R 4974867 4974890 CCAAACTATTAGGAGCATACATCG 59 4974742 4974815 CCAGTTTCTGCTTCGATCG 59 NA Drosophila melanogaster 61 CG13747 FBgn0033364 FBtr0088660 1 1 1 121 2R 4905717 4905802 GCTACTGATCAATTTGTTGACC 58 4906003 4906024 GATAAATTAGGCAGCTTGAGTC 57 NA Drosophila melanogaster 61 CG13748 FBgn0033355 FBtr0088656 3 1 1 80 2R 4827988 4828007 GAAAGAGTACGTTGGAGTGG 58 4828050 4828068 TAGAGGTCCATGGGAAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8635 FBgn0033317 FBtr0088727 3 1 1 128 2R 4518512 4518590 CCACCACGGATATTATTTGCA 58 4518404 4518422 TCAGCACATATCCAGCTGG 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 2 3 3 85 2R 4508173 4508247 TTACGAAGCCTTCCATTCGT 59 4508295 4508313 AGTAGCAGTTCACCTTGGG 59 NA Drosophila melanogaster 61 CG14756 FBgn0033275 FBtr0088804 1 1 1 67 2R 4092793 4092811 TGAACTGCAGGACCTTGAG 59 4092744 4092762 AGAGGTCGATTTCCTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boca FBgn0004132 FBtr0088953 1 1 1 91 2R 3453844 3454027 TCAATGGGAGGAAGATGAAGAG 59 3453774 3453792 TGTCCAGATTGCTCAGGTC 59 NA Drosophila melanogaster 61 CG12736 FBgn0033184 FBtr0088981 1 1 1 83 2R 3397262 3397284 CCATATTGGGTATTCCACTACAG 58 3397135 3397225 GAGATCATGTTCTTTATGTAGTCCG 59 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 2 2 3 195 2R 3330872 3330957 GTTTCCCATCCTCAAGTGC 58 3331116 3331134 CACCTGGTAGCGGATACAG 59 NA Drosophila melanogaster 61 CG12164 FBgn0033158 FBtr0088963 2 1 1 102 2R 3199609 3199691 AAGTCAAGGTTCCCGTCTG 59 3199757 3199775 TTAACCTCCTTCCAGGCAG 59 NA Drosophila melanogaster 61 Incenp FBgn0260991 FBtr0088961 1 1 1 201 2R 3167670 3167751 AACCCACTGCTTCAGAGTC 59 3168060 3168078 ATGGTAGTGTGCTTGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11060 FBgn0033149 FBtr0089045 3 1 1 111 2R 3064507 3064526 TTGATTACCGCAATCCTGTC 58 3064597 3064711 GGACTTAGATTCTGAATGTCCA 57 NA Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 3 2 2 161 2R 3012688 3012927 TGCGATGAGATCATCTTCTC 57 3013051 3013069 GAACATTGTGTCGAAGCAG 57 NA Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 1 1 1 60 2R 2837218 2837237 AAGTGGTCTGGAAAGATGTC 57 2837257 2837328 CGATAGACTTGACCAAATACCT 57 NA DesignNoJunction Drosophila melanogaster 61 ubl FBgn0022224 FBtr0086211 1 1 1 80 2R 2697755 2697775 ACAAAGCACGAGAAGATTGTC 59 2697630 2697718 GTGAATTTCATAGTCAGATAGGCG 59 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 3 2 2 170 2R 1846871 1846955 CTTCATCGGAGCAGAACTG 58 1847088 1847107 AATATCAGGAGGCAGGTCAC 59 NA Drosophila melanogaster 61 Or42a FBgn0033041 FBtr0086052 3 1 1 99 2R 1679083 1679165 GGGAACTAACATCAGTGTCAC 58 1679004 1679025 CTCTTCCATTTCAGATTTGGCA 59 NA Drosophila melanogaster 61 CG7791 FBgn0033038 FBtr0086057 1 1 1 80 2R 1647024 1647100 CTTTCGTAACTACTTTCCTACCTC 58 1646967 1646985 CGCATCTGAACGTTCTCTG 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 1 3 3 109 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 1 3 3 80 2L 21759352 21760485 GAGCTGGAAGAAACTTCATCC 59 21760525 21760545 CTTCATCGCATCAAATTCGGA 59 NA Drosophila melanogaster 61 CheB38b FBgn0067311 FBtr0081454 2 1 1 85 2L 20816837 20816858 ACTGGTTCAAGTATTGGTTCAG 58 20816714 20816793 CACTAGCACGGTATCTTTCAC 58 NA Drosophila melanogaster 61 CG40169 FBgn0259995 FBtr0100178 1 1 1 107 2L 20238695 20243220 AAGAGCAGTGGTTCTTGCA 59 20243289 20243309 GACTTTCACTCATCAGTCCGA 59 NA Drosophila melanogaster 61 Kua FBgn0032850 FBtr0081336 2 1 1 80 2L 20101829 20101919 CGATGATTGGAAAGAACTTCCT 58 20101960 20101978 CAATGAAATCGTGTCGCGT 59 NA Drosophila melanogaster 61 CG10747 FBgn0032845 FBtr0081341 1 1 1 80 2L 20091044 20091062 TCACTGGATGAGGGATCTG 58 20090924 20091000 ATCGAATTGTGGGAACCTG 57 NA Drosophila melanogaster 61 Victoria FBgn0053117 FBtr0081309 3 1 1 179 2L 19913381 19913456 CAAATCAGCTGCCTTCTCG 59 19913220 19913241 GGAGTATTTCTCGTAGAAGGCA 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0299519,FBtr0302107,FBtr0299520,FBtr0081281 2 6 6 83 2L 19515103 19515182 ATATCCAATGCGAACCTCGA 59 19515039 19515057 ATCCGTACGTGTAGCACTC 59 NA Drosophila melanogaster 61 CG16771 FBgn0032779 FBtr0081204 1 1 1 60 2L 19428032 19428050 GTCGATGGGAGTGTGAGAG 59 19428073 19428092 ATGTCCATACATCCCTGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dnt FBgn0024245 FBtr0081224 3 1 1 81 2L 19339824 19339842 AACTGTCCATGGCATTGGA 59 19339643 19339780 TCGTCAATAACGCAGTTCCT 59 NA Drosophila melanogaster 61 CG10750 FBgn0032769 FBtr0081196 2 1 1 84 2L 19301274 19301293 TCTACAACCTGGACAAGGAG 58 19301340 19301412 CTGGGAACAATGTCTCGAC 58 NA Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 2 2 2 107 2L 19056064 19056261 CAGCACGATAGTGTCAACG 59 19056330 19056350 CTTGACTCGATGATTGTGTCC 59 NA Drosophila melanogaster 61 CG10470 FBgn0032746 FBtr0081146 2 1 1 148 2L 19049101 19049122 GAGCCGCTTAATGATTTATGTC 58 19049231 19049300 CACCCATGTAAGACCTTCG 58 NA InUTR Drosophila melanogaster 61 CG31792 FBgn0051792 FBtr0081137 1 1 1 91 2L 18998786 18998807 GACACCTTTATTCAGTTTACCC 57 18998859 18998931 GCGATTCCAATCTCTTGGT 57 NA Drosophila melanogaster 61 CG10570 FBgn0040992 FBtr0081122 1 1 1 93 2L 18810679 18810831 TGAAGCAAGCAAGATTGGG 58 18810604 18810625 AGGGTGAGTACTTTAAGTTCCT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG42627 FBgn0261350 FBtr0302268 2 1 1 80 2L 18672283 18672354 TCGAGGGCAGTAGTTTGAC 59 18672221 18672243 TTAGTCTCTGATCCATACAGCTG 59 NA Drosophila melanogaster 61 amos FBgn0003270 FBtr0081081 1 1 1 60 2L 18596622 18596640 GAATCAGGGCAGAAGTCCA 59 18596580 18596598 CTTGTCGTATGGCTTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090,FBtr0081089,FBtr0081091 3 3 3 149 2L 18442842 18442861 TATGCGAAGCTCCACTACTG 59 18442712 18442732 AGACCTCTACTTCCTGTTCTG 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Arr1 FBgn0000120 FBtr0081030 3 1 1 80 2L 18078425 18078443 CGAACAACATGATCACGCT 58 18078485 18078924 TGATTCCATCAATGGGTTCCA 59 NA Drosophila melanogaster 61 CG13282 FBgn0032612 FBtr0080929 2 1 1 85 2L 16833288 16833446 ATGAGGGAGGAGTACCTGG 59 16833221 16833240 CTTATGTAGCAGGGTCCTGG 59 NA Drosophila melanogaster 61 CG31782 FBgn0051782 FBtr0080938,FBtr0080939 1 2 2 82 2L 16701449 16701471 CCTTCAAGTATGCTACATCACTG 59 16701296 16701407 CATAAAGGCGTAGTCGCAC 59 NA Drosophila melanogaster 61 CG4631 FBgn0032590 FBtr0080871 1 1 1 60 2L 16608979 16608997 ACACCAAACCAGTATTCCC 57 16609018 16609039 GCACTATCTTTCCTTGATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4440 FBgn0040984 FBtr0080835 3 1 1 82 2L 16329972 16329991 TCCAGTATCGCTAAAGAAGC 57 16330095 16330113 GAGGCTATGGCAAACAGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18480 FBgn0028518 FBtr0080755 2 1 1 70 2L 15631558 15631576 AAGAGTTGCTGTGAGATGC 58 15631610 15631694 TTCAGAGGAGCTGAAACCC 59 NA DesignRelaxed Drosophila melanogaster 61 l(2)35Bd FBgn0001974 FBtr0080696 1 1 1 80 2L 15011209 15011287 GAAGCAGCAACTCTTTATTTGG 58 15011328 15011346 TTCGAACAATGGTTTGCCA 58 NA Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080694 1 1 2 93 2L 15004048 15005967 TGTTGGACTAGTGCTTCGG 59 15006024 15006042 TCTGTACGATCACCTTGCC 59 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 2 2 3 90 2L 14392291 14392309 CTATGTGAAGGCTCTGCAC 58 14391989 14392237 ATTTAACCCAACGGGTGGA 59 NA Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0080621,FBtr0114463 1 2 3 123 2L 14277368 14277386 TCGAGGACTTCAAGAGCAC 59 14277533 14277552 ACATGCTTAGGACGTTATCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 3 3 3 80 2L 14062614 14068877 TGCTAAAGTTTGCCTAGCA 57 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 3 3 9 80 2L 13274310 13274331 GAGCGTATCATACCGATAACTC 58 13274372 13276260 GGAGACTCCATTACCACCA 58 NA Drosophila melanogaster 61 CG5787 FBgn0032454 FBtr0080405 3 1 1 88 2L 12710422 12710440 AAAGGTGGACCACAAGGAG 59 12710216 12710372 CGCTTCTGACTAATTTGGACG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 3 1 8 119 2L 12498562 12498582 TACTCAATAATGATCGCGGCT 59 12458214 12477123 TGACCAGATCCATTGCCTG 59 NA Drosophila melanogaster 61 CG18787 FBgn0042125 FBtr0080314 2 1 1 61 2L 11999080 11999156 GTTAAGCAATATCTCAAAGCCG 58 11999040 11999058 GACAAAGGCCACATCTTGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp33B FBgn0032376 FBtr0080265 3 1 1 81 2L 11791204 11791277 GGTCGTGGTGAAATATCCG 58 11791141 11791159 AATATCGGGAACGTTGTCG 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115,FBtr0300114,FBtr0300537 1 4 4 117 2L 11165824 11165846 GAGAAGTACGACAATAACTGGTG 59 11165663 11165747 AGGGTCTGGTTTGGTTCTG 59 NA Drosophila melanogaster 61 CG7300 FBgn0032286 FBtr0080125 1 1 1 60 2L 10697024 10697044 GACGAATACTGCACACTTGAC 59 10696984 10697002 ATGAAGGTCACTGGAACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31871 FBgn0051871 FBtr0080104 1 1 1 80 2L 10668327 10668703 TCAGGATTAGGCTACATGCTC 60 10668744 10668763 GTTCTTGGAGTACCGATTGC 59 NA Drosophila melanogaster 61 CG18302 FBgn0032266 FBtr0080095 1 1 1 80 2L 10535693 10535777 GACCATTAGTGTTTATTGCCAG 57 10535818 10535836 TATGTATCAGGCTTCGCCA 58 NA Drosophila melanogaster 61 CG6144 FBgn0032259 FBtr0100565 2 1 1 260 2L 10488974 10489055 TTTGAAGTGCGAAAGTGCC 59 10489279 10489297 AACATGGTTAGCGTTCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5045 FBgn0032229 FBtr0080000 1 1 1 107 2L 10356949 10357022 TTAGTTCAGTACAATGTGGCG 58 10357091 10357109 AGAATATGTCGTAGGCCCG 59 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 2 2 2 82 2L 10339550 10339571 TGAGAAACTCCTTGAGATTTGG 58 10339613 10340165 TTTCCCAATCAGATCTGCTG 58 NA Drosophila melanogaster 61 Ripalpha FBgn0032189 FBtr0079962 3 1 1 116 2L 10200226 10200299 ATCCAATTGTCCGAACTCAG 58 10200129 10200147 ATACCACTCGTTGACATCG 57 NA Drosophila melanogaster 61 CG13126 FBgn0032168 FBtr0079892 2 1 1 91 2L 9952819 9952837 TCAAAGCATGCCATCTGTC 58 9952687 9952765 GAATAGGCAGACTTTCCGTG 58 NA Drosophila melanogaster 61 CG4594 FBgn0032161 FBtr0079878 2 1 1 111 2L 9920592 9920662 TTTAACCTCTGCCAGCTCC 59 9920735 9920755 CCATACATTCTGCAATTCGGT 59 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 3 2 2 88 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571746 9571852 CCTGATTATCCCTGTTGCG 58 NA Drosophila melanogaster 61 Fbp2 FBgn0000640 FBtr0079808 2 1 1 92 2L 9427175 9427195 ATGATGGGACACATTGATGTG 58 9427248 9427327 CATGCCAGTCAGATTCATGC 59 NA Drosophila melanogaster 61 Cks30A FBgn0010314 FBtr0079799 1 1 1 98 2L 9331100 9331191 TTCGAGTACAGACATGTGGT 59 9331252 9331270 CTGTACGCCAATTGATCGC 60 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0079771,FBtr0110960,FBtr0301039,FBtr0301040 2 4 4 80 2L 9154694 9154714 CATGACAGGACCCATTAAACG 59 9154755 9156506 ACAAAGTATCGCTCCTTCCA 59 NA Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 3 1 1 93 2L 8519892 8519910 TCAACGGATGTAAGGCGAG 59 8519967 8520085 AAACCGGCTCATCTTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13089 FBgn0032052 FBtr0079682 2 1 1 159 2L 8516155 8516175 TGCCACTAAGTATTAAGCTGC 58 8516296 8516374 CCATGGGCCATGAATTTCC 59 NA Drosophila melanogaster 61 CG13398 FBgn0032042 FBtr0079710 1 1 1 173 2L 8415048 8415066 CTGGGTAGCTGATTTCAGC 58 8414821 8414839 AACACATTCTCATGACCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13385 FBgn0032039 FBtr0079660 1 1 1 60 2L 8397039 8397057 CAGCATAAACCAACCTCCA 58 8397080 8397099 GGGCATAATACGGTCTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 3 1 1 138 2L 8309197 8309271 TAATTTGGATGTGGGCGAG 57 8309370 8309391 CCGTATCCAACATATGTCTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8372 FBgn0032000 FBtr0079634,FBtr0079633 3 2 2 60 2L 8212303 8212324 ATATCTTCTGTGACAACTGCCA 59 8212264 8212285 TAGTAGCGCATGTAGATGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7224 FBgn0031971 FBtr0100151 3 1 2 195 2L 7998974 7998992 AGTGACATTGACTCCCAGC 59 7999151 7999169 ACCTTGTTTGCCCATTTGG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG7227 FBgn0031970 FBtr0079551 2 1 1 80 2L 7995680 7995764 TGGCAAATGGTACTGATAACC 58 7995620 7995639 TGTTGAGAAGACCGGATCTC 59 NA Drosophila melanogaster 61 TwdlE FBgn0031957 FBtr0079563 1 1 1 113 2L 7860762 7860780 CAGTAACAGCCAGTAGCAC 58 7860586 7860685 CCATGAGGACCACTAACAC 57 NA InUTR Drosophila melanogaster 61 CG7164 FBgn0031946 FBtr0079487 3 1 1 83 2L 7781842 7781920 ACCATGAAGTCGGTACGAG 59 7781966 7781985 TACTGGTACTGGATTCGGAG 58 NA Drosophila melanogaster 61 CG7179 FBgn0020880 FBtr0301151 3 1 1 60 2L 7777022 7777043 GATCAATATCAGACCACATCCT 57 7776983 7777001 GGGCATCGTAATCCTTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7179 FBgn0020880 FBtr0301151 2 1 1 60 2L 7777027 7777048 TTTCCGATCAATATCAGACCAC 58 7776988 7777009 TCGTAATCCTTGAGAGTAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 3 2 2 90 2L 7196230 7196325 GACAAGATCACAAGGTGGC 58 7196158 7196177 TATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 2 3 3 108 2L 7057577 7057595 CATCGAGCTGTCTTTGACG 59 7057667 7057874 GTCATTTCCACCTGTCGTC 58 NA Drosophila melanogaster 61 CG31908 FBgn0051908 FBtr0079430 2 1 2 146 2L 7027016 7027208 GTGTGGCTATCAAAGCAGG 58 7026888 7026909 CTGATACATGATTCCTTCGCAC 59 NA InUTR Drosophila melanogaster 61 iHog FBgn0031872 FBtr0079365 1 1 1 143 2L 6948538 6948556 TATTAACTGCGCAAACGCA 58 6948344 6948362 AAACCGGAATTGCTTCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 3 2 2 80 2L 6725249 6725785 ATAATACCAGGCTTCTCCTCG 59 6725827 6725845 GCTTCACAACGGTCATACG 59 NA Drosophila melanogaster 61 CG9232 FBgn0031845 FBtr0079322 2 1 1 80 2L 6667004 6667099 GTTGTTATCGACGAGTGGA 57 6666942 6666962 TCCCTTGTTCTCGAATATCTG 57 NA Drosophila melanogaster 61 CG42369 FBgn0259715 FBtr0299968 2 1 1 60 2L 6396876 6396896 CAACTACACCGAAGAGATGAG 58 6396836 6396854 CGTCACCTTCAATTGAAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ugt37b1 FBgn0026755 FBtr0079242 2 1 1 110 2L 6225753 6225829 GATCTACAGGGAGATCTATGGC 59 6225900 6225918 ATGGGTCCTTCGCTAATCC 59 NA Drosophila melanogaster 61 Vm26Ac FBgn0086266 FBtr0079240 1 1 1 60 2L 5958423 5958442 GTATCTGAACCGTAGGAGGA 58 5958382 5958401 GTTGTTCTCCACGATTACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9044 FBgn0031752 FBtr0273412 3 1 1 95 2L 5951733 5951751 TGTCGACAGAAGAACGTCC 59 5951810 5951885 CATCGGATACCGGATCCTC 59 NA Drosophila melanogaster 61 CG9021 FBgn0031747 FBtr0079154 1 1 1 114 2L 5904624 5904644 CATATTCAGTTTCTGCCTGCT 58 5904400 5904422 CTCTTGAGATTCATCTGGAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 3 2 2 103 2L 5547903 5547981 GTGCCGACAGATACTTCGT 59 5548047 5548066 CTGAAAGGATACCTTGCCCT 59 NA Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 1 2 2 95 2L 5547826 5547844 CATCTTGGAAACCAGCGAC 59 5547903 5547981 ACGAAGTATCTGTCGGCAC 59 NA Drosophila melanogaster 61 CG7382 FBgn0031708 FBtr0079130 3 1 1 86 2L 5519146 5519219 CCAGAAGGAGTGACTCTGG 59 5519078 5519096 CCTCAAGGATGATGGTGGT 59 NA Drosophila melanogaster 61 Cyp28d1 FBgn0031689 FBtr0079062 2 1 1 80 2L 5210687 5210765 GATCTATGAGCAGTACAAGAACAC 59 5210801 5210822 GGAGTTGTGACCATTAGTTGTG 60 NA Drosophila melanogaster 61 CG8680 FBgn0031684 FBtr0079025 3 1 1 82 2L 5099785 5099803 CGAACGAGTTGTCTTCTGC 59 5099658 5099739 GATTTCCGGGTTTGTCCAG 58 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 3 2 3 92 2L 5071019 5071109 CGTTTCCGGCGTAATACTG 59 5071234 5071252 ATTCCAACCTTCTTGGTGC 58 NA InUTR Drosophila melanogaster 61 Tfb5 FBgn0259719 FBtr0301130 1 1 1 81 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010603 5010623 GGATAATGAATTTGCGTCCCA 59 NA Nonspecific Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079045 1 1 2 233 2L 4981554 4981572 GTTGCAGTCAGAAGGTGAC 58 4981266 4981284 GATAAATGCGTCCGCACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34125 FBgn0083961 FBtr0110839 1 1 1 61 2L 4965787 4965805 TACGACTATCGCCATTCCG 60 4965889 4965907 TCTTCATACGTTGGCGGAG 60 NA DesignNoJunction Drosophila melanogaster 61 CG11927 FBgn0031638 FBtr0077386 3 1 1 60 2L 4847969 4847989 AAGAAATGCAAGGATGCACTG 59 4848009 4848029 TATTGTTGCTCCGTTGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3244 FBgn0031629 FBtr0077417 1 1 1 160 2L 4799867 4801825 CAAGCAAAGATGAAAGTCACC 58 4797620 4797638 TAGGAGAACTCCTTGGGAC 57 NA InUTR Drosophila melanogaster 61 CG3251 FBgn0031622 FBtr0077422 2 1 1 80 2L 4690500 4690573 TCCACTGAAGTTAGAAAGGCA 59 4690440 4690458 CCCTAGCATATGCTTCCGA 59 NA Drosophila melanogaster 61 CG17840 FBgn0031611 FBtr0077443 2 1 1 139 2L 4466993 4467070 TTTGACAAAGCAGGGTCCA 60 4467173 4467191 CACACGAATAGGGTAGGCA 59 NA Drosophila melanogaster 61 CG34176 FBgn0085205 FBtr0112367 2 1 1 192 2L 4004191 4004209 AAGGTACAGATTGCACCAC 57 4004363 4004383 CTCAATACTGTGGATTGTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 3 3 3 165 2L 3870399 3870417 CAACAACCTGAACTGCCAG 59 3870544 3870631 GCCGAGTTGTTCGATATACTC 58 NA Drosophila melanogaster 61 CG10019 FBgn0031568 FBtr0273188 1 1 1 81 2L 3748772 3749033 CAGTTATGGCATCGTCTTCG 59 3749076 3749095 CCGCTTAAAGTAATTGCCCA 59 NA Drosophila melanogaster 61 CG31954 FBgn0051954 FBtr0077563 1 1 1 74 2L 3509846 3509864 CTTCGTCCCATATTTGCGG 59 3509723 3509808 TACCATATGTGCAATGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2772 FBgn0031533 FBtr0077516 3 1 1 80 2L 3447081 3447154 CTTAACCAGACTCTGCTCCC 60 3447195 3447215 CTGAATGTAGTGAATGGCCTG 59 NA Drosophila melanogaster 61 CG33281 FBgn0053281 FBtr0077584 3 1 1 94 2L 3326282 3326303 AATAATGCCGCAGAAGATAAGG 59 3326357 3326443 AAACCGGCATCAACTTTACG 59 NA Drosophila melanogaster 61 CG3165 FBgn0031484 FBtr0077642 1 1 1 80 2L 2977467 2977488 CACAAATTGAATGTGCTCTTCC 58 2977528 2977603 CAAGTAGTTGCTCAGACCTG 58 NA Drosophila melanogaster 61 Trn-SR FBgn0031456 FBtr0077715 1 1 1 80 2L 2760078 2760097 CTCTTCCAAGGCAACAATCC 59 2760137 2760228 CCAAGAATAGATCGACTTCTGG 58 NA Drosophila melanogaster 61 Cwc25 FBgn0031452 FBtr0077712 3 1 1 163 2L 2745203 2745277 GTGGCGGAGATCTAAATCTG 58 2745402 2745421 CAATCGCCTTAGTTCCTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG31949 FBgn0051949 FBtr0077757 3 1 1 60 2L 2300479 2300499 GTCTGAATGAGCAACTCTCCT 59 2300519 2300539 ACCATTGTCAGTATAAGCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32463 FBgn0052463 FBtr0077808 2 1 1 83 2L 2239223 2239241 TACAAACGGATCCCTATGC 57 2239095 2239116 GATCGTCTTCATTATTGCTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31672 FBgn0028952 FBtr0077825 2 1 1 90 2L 2046208 2046437 CTTTCAAAGAGCCATACATGC 58 2046489 2046507 TTATAGACTCCTGGCGCTC 58 NA Drosophila melanogaster 61 CG9512 FBgn0030593 FBtr0073979 3 1 1 62 X 14796971 14798009 CTGTTGCTTTCAGGCATCG 59 14796927 14796945 CAGTTTCACGGGAATTCCC 58 NA DesignRelaxed Drosophila melanogaster 61 Fbxl4 FBgn0030555 FBtr0073923 2 1 1 80 X 14129631 14129706 GATAATCTGATAGAGTTGAGCCTG 58 14129574 14129592 CTTGAGATTGGCCAGACAG 58 NA Drosophila melanogaster 61 Ste:CG33247 FBgn0053247 FBtr0300096 1 1 1 110 X 13941009 13941027 TCTGATACACAGCTGGACG 59 13940857 13940935 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12535 FBgn0029657 FBtr0070534 3 1 1 80 X 3286920 3287074 TTTACGGAATCGTAACGATCTC 58 3286861 3286879 AGCACTCCATCGTTAGGAC 59 NA Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070302 1 1 2 80 X 1683702 1683770 TGGATGCAATTAGGCTGTC 57 1684199 1684222 CAAAGCATCTCTAGAGATCATCTC 58 NA Drosophila melanogaster 61 CG13361 FBgn0029532 FBtr0070149 3 1 1 103 X 646258 646354 AATTCACGCTACAAGGGAC 57 646173 646191 TATCTCCGAGGTCTGAAGC 58 NA Drosophila melanogaster 61 CG17198 FBgn0039366 FBtr0084924 2 1 1 60 3R 21599248 21599269 GGAATAATTTGACCCTGATCCT 58 21599209 21599229 ATATTTGGCGATAGGCAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cdc16 FBgn0025781 FBtr0084377 1 1 1 80 3R 19107950 19107968 CACAAATGCCCAAGGTGAG 59 19108012 19108089 CTTCCAGGACTTTCTGTGC 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 10 10 92 3R 561271 561375 CGATCTGCATGTGAAATACGA 59 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 CG33772 FBgn0053772 FBtr0300027 1 1 1 117 3L 22645110 22645170 ACTGTATCTCATCGTTGGCA 59 22645012 22645035 GTCCCTAACATAAACACTAGAGTC 58 NA Drosophila melanogaster 61 CG10589 FBgn0037035 FBtr0078266 1 1 1 60 3L 20922079 20922097 TGATCTGAGTGTCCTCTCC 57 20922121 20922139 CAACTTGCAGACTTTGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5535 FBgn0036764 FBtr0273277,FBtr0075159 1 2 2 81 3L 17847363 17847451 AATACGCAATTGGCTCTGC 59 17847300 17847318 AAACTGCTCATCGGATTGC 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139 2 4 10 90 3L 5538127 5538146 ACCGTCGTCTAATTCTCGAC 59 5537032 5538078 CCATACCTATAGGCATTTGTGTC 59 NA Drosophila melanogaster 61 Rcd5 FBgn0035489 FBtr0073202 2 1 1 132 3L 4041685 4041764 ATTAAGAGCTCGGAACAACCA 59 4041858 4041876 ACAGGGTGTACTGCTTGAG 59 NA Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 1 2 2 100 2R 18183292 18183367 ACGACGCATACGAGATCTC 59 18183431 18183449 CATCTTCGTAGGAGGGCAG 59 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0301208,FBtr0086281,FBtr0301207,FBtr0086279 3 5 5 83 2R 16211658 16211676 GACGTTCCAGAGATCGGAG 59 16211723 16211809 CACAACCTTCAGGAGAGCT 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009,FBtr0100001 3 2 2 80 2R 12313407 12313427 GATCATGAATTTGGCAATCCG 58 12313469 12314012 GTCGATCCGTATCTTGTCC 57 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 kek4 FBgn0032484 FBtr0080485 3 1 1 101 2L 13213082 13213101 TAGACAATCAGGCGGAATCC 59 13212935 13213021 CGAGCTCATCTTTCTGTTTGAG 59 NA Drosophila melanogaster 61 CG6750 FBgn0032292 FBtr0080122 3 1 1 69 2L 10732188 10732206 GATCACCCAAATCCAGGAC 57 10732077 10732095 GAGATACTTGCCGTTCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9548 FBgn0031822 FBtr0079264 2 1 1 84 2L 6490334 6490354 TTGTAAATCTAGGCAGCTCCA 59 6490205 6490292 CGGAGAGCAGATTAATAGTTCTG 58 NA InUTR Drosophila melanogaster 61 CG15422 FBgn0031579 FBtr0077505 2 1 1 60 2L 4005274 4005293 CACCAATGGATACTATCCGC 58 4005313 4005334 CTGATACTGGTACTGATACTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0078002,FBtr0078001 3 2 3 87 2L 759540 759690 TGGGCAAGAAACGATATTATCG 59 759738 759756 GATCATCGACCACGAATCG 58 NA Drosophila melanogaster 61 CG17078 FBgn0086855 FBtr0300804 2 1 1 80 2L 275244 275330 TGGCTCTAGTCAATTCACCC 59 275183 275202 TCTGGCCTTCAATGTAGACC 59 NA Drosophila melanogaster 61 CG12301 FBgn0036514 FBtr0075564 3 1 1 65 3L 15574372 15574390 AACAGAGATCTGCGGAGAC 59 15574476 15574496 CCGCAGTATTTACGTAAACCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0301421,FBtr0301423 3 5 7 91 2R 2610311 2610329 TGGTCAAGATCCAGGATCC 58 2610181 2610259 CAGTAATGGGTTTCCATTTCTG 57 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091630,FBtr0091631,FBtr0091632 1 3 3 80 4 1252146 1252167 CAACACATGATAGACCCAACTC 59 1252208 1252282 TCCATCAGGTCTGTTTCCA 58 NA Drosophila melanogaster 61 CG32075 FBgn0052075 FBtr0076240 2 1 1 88 3L 11056497 11056575 CCGAACTGGATTTGAACGA 58 11056427 11056445 TAACAGACTGCGCATTGTC 58 NA Drosophila melanogaster 61 CG30374 FBgn0050374 FBtr0088810 1 1 1 60 2R 4045076 4045097 GATTGCCAGAATATGTTGAGGA 58 4045037 4045057 TGACACATATGAGACTGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10263 FBgn0032812 FBtr0081265,FBtr0081263 2 2 3 63 2L 19581867 19582015 GCCAAACAATCGACATGGA 58 19581822 19581840 GAAAGCGTGGTGAAAGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG17139 FBgn0260454 FBtr0100836 1 1 1 87 2L 10845167 10845185 GATCTTGGAGTGCATGGTG 58 10845026 10845116 GAAACTTGCGTCCTTCAGG 59 NA Nonspecific Drosophila melanogaster 61 jet FBgn0031652 FBtr0110896 2 1 2 167 2L 4948901 4948919 CTATCTCCGACTATGGCGT 58 4948414 4948432 GGTGATGTTGCACAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0070823 1 1 4 136 X 5796022 5796042 CGGTTTATTCCAGTCATTCCT 58 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG40948 FBgn0085541 FBtr0302240 2 1 1 60 U 8664463 8664484 ATACTAGACACATGGAACAAGG 57 8664424 8664445 TCTCCGATGTCTTGAATAAGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31301 FBgn0051301 FBtr0083087 3 1 1 86 3R 11173050 11173068 ATATCGCATGATGCGACTG 58 11173118 11173194 AGCAGATAACATACGGGCT 58 NA Drosophila melanogaster 61 CG34259 FBgn0085288 FBtr0300030 1 1 1 106 3L 2027956 2028031 GGACTTGATGATCCTAACTGG 58 2028099 2028117 CTGCCTCAAGTATGAGCAC 58 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086219,FBtr0086221,FBtr0086220,FBtr0086222,FBtr0301760 3 5 5 209 2R 16492939 16492957 TTGGGTAACGGACTGAGTG 59 16493191 16493210 CTTACCAATGATGGCACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 2 1 1 118 2R 18545765 18546430 TCCTGTGCCTGTTCATCTG 59 18546512 18546530 TTAGTTCTCGTAGGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14286 FBgn0038673 FBtr0083710 2 1 1 60 3R 14850205 14850226 CAAATCAAATTCACACCTACGG 58 14850243 14850265 CCGACTTCTTTACAAAGCTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ine FBgn0011603 FBtr0077447,FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 3 5 5 107 2L 4468744 4468762 GGAAGACTGTCGAAGAACG 58 4468590 4468673 TACCCAGATGGCAAAGAGG 59 NA Drosophila melanogaster 61 CR40677 FBgn0085765 FBtr0114215 1 1 1 60 XHet 184150 184169 CAGGACACATGAACATCGAC 59 184189 184210 TAAAGTACCTAACAGCATGGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9576 FBgn0031091 FBtr0070027 1 1 1 241 X 20056465 20056575 ACTGCTTGTACCTCAGCTC 59 20056242 20056260 GAACGAGTTGTACGTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Mer FBgn0086384 FBtr0074754 1 1 1 124 X 19587274 19587478 AAACAATCGACCATCAGCC 58 19587168 19587186 ATCTAGTGGCACGATTCCT 58 NA InUTR Drosophila melanogaster 61 CG14191 FBgn0030981 FBtr0074665 3 1 1 149 X 18975765 18975898 AAACACGCCAACATGAAGG 59 18976010 18976029 GTATCCGCCGCTATATCCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 1 8 8 83 X 17844790 17845235 CTAACTGTCAGGTTCCTCG 57 17844725 17844744 AATGATGGCGATTATGTCGA 57 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 2 2 2 147 X 16828339 16828357 CCTATTTGACGCAGGTTGG 58 16828468 16828910 CTGGAGAGGACCAAACTGG 59 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 2 3 3 98 X 16494338 16494422 AGCAACAACTCCATCATGG 58 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 2 3 3 88 X 16310044 16310062 GAGGAAACCAATCGGAAGG 58 16310114 16310201 TGCTCTTTCAAGGACTGTG 57 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074161,FBtr0074160,FBtr0074159 2 3 3 80 X 15829502 15829520 GAATGTTCTGTACGGTCGA 57 15829366 15829460 GTAATACGTGCTCTAGAACCC 58 NA Drosophila melanogaster 61 Ac13E FBgn0022710 FBtr0074073,FBtr0100142 3 2 2 113 X 15411720 15413960 CATGCGATACAGGTTCACC 58 15411625 15411643 AAGGAGCTAGAGATTGGGC 58 NA Drosophila melanogaster 61 CG5334 FBgn0030577 FBtr0073935 2 1 1 60 X 14669954 14669973 TCTACAATCACCGTTCTCTG 57 14669996 14670014 TCATCCTCCATTGAATGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr8 FBgn0052600 FBtr0073913 1 1 1 80 X 14347064 14347085 CTGACTTGCATTGTGAAATTCG 59 14347123 14348108 ATCGAAATTTATGATCTCGCGG 59 NA Drosophila melanogaster 61 Ste:CG33247 FBgn0053247 FBtr0300096 3 1 1 110 X 13941009 13941027 TCTGATACACAGCTGGACG 59 13940857 13940935 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0112813,FBtr0112812,FBtr0073490,FBtr0301289,FBtr0073486,FBtr0301288,FBtr0073489,FBtr0073488,FBtr0073485 1 10 15 81 X 11292684 11292765 CTGGATAAGCAATCGACATTGG 59 11292805 11292825 CATCGCGACTCTTCATAAACG 59 NA Drosophila melanogaster 61 Gga FBgn0030141 FBtr0071363 3 1 1 96 X 9496623 9496641 CGAGCTATACAAGAGCTGC 58 9496701 9496788 CAGAGTGTCAGCTACAAGC 58 NA Drosophila melanogaster 61 t FBgn0086367 FBtr0071335 2 1 1 82 X 9115539 9116987 GTTGGCTTCGATATGGGTC 58 9115475 9115493 AAGTAGGTCTCGTTGAGGG 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071209,FBtr0301762,FBtr0071208,FBtr0301764,FBtr0071207 1 6 6 80 X 8426429 8426450 GCAACAGAATAAGGAAAGTGAC 58 8426489 8438894 ATCCAACTATATTCTGGCTCG 57 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071069 1 2 3 180 X 7526815 7539817 CTCATTCAGAATTCCGCGC 59 7539961 7539979 TCGATGTCGTTTGTTGCTG 59 NA InUTR Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091672,FBtr0091673 2 3 3 60 X 6772499 6772579 GCTCTACAAGGCAAATCGG 59 6772601 6772621 GTTGTAGTTGCGATCGTACTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112703 1 1 6 165 X 6435352 6437135 CAGCAACAGTCATTCCTGC 59 6446007 6446027 CTATAGAGGTTGCAAAGTCGC 59 NA InUTR Drosophila melanogaster 61 CG4666 FBgn0029838 FBtr0070887 1 1 1 102 X 5971007 5971378 ACTGCAAATTGGGAATCCAG 58 5970924 5970944 GGATGAAGTAGTTGACATCCC 58 NA InUTR Drosophila melanogaster 61 Tre1 FBgn0046687 FBtr0070848 2 1 1 93 X 5569068 5569157 ATTCTTCCAGGAGAGCTGG 58 5568993 5569012 CATGCTGAGGAGTGAAACAG 59 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 3 4 4 140 X 4972049 4972158 AACAGGTGTTATTTCGCCA 57 4971927 4971945 ATAGTGGAGCCTCCAAGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG6927 FBgn0029733 FBtr0070721 2 1 1 84 X 4801375 4801393 CTGAGAAACTCGCTCTGGA 59 4801495 4801513 GGATGTCCTTCTCCGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3626 FBgn0029706 FBtr0070652 2 1 1 80 X 4263630 4263716 CAGCATGCAGGTTACTACG 58 4263759 4263778 AAAGGTGTCCAGATCCTGTC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 1 4 4 98 X 3846169 3846187 CTGAGAGTCTGGACTTGCT 58 3846246 3846812 GTGTGATTTGATCCTTCAAGTG 58 NA Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0070432,FBtr0301515 1 2 2 149 X 2024123 2024141 TTACAGAATGCTGCAGGAC 57 2023931 2024013 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 1 2 2 111 X 1814942 1814960 CTAGTGGCCATAAACGCAG 58 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 CR41605 FBgn0085815 FBtr0114273 2 1 1 60 U 2950899 2950920 AAGAACGAAAGTTAGAGGTTCG 58 2950860 2950880 TCGTTTCTGGTTAGAACAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 2 3 3 71 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645220 645239 CCTGGTTACTTCTTAGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 Npc2g FBgn0039800 FBtr0085723 2 1 1 63 3R 26570593 26570611 GAAACAGACCTACACCACC 57 26570548 26570566 GATGGTGTACGGACTCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 1 5 5 80 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871276 25871294 GGCATCAGATACTGTCCCT 58 NA Drosophila melanogaster 61 CG34296 FBgn0085325 FBtr0112492 1 1 1 69 3R 25548324 25548398 GAATGGCGATTGGTGACTC 59 25548431 25548449 CAACGCAAGCTATAGCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6066 FBgn0039488 FBtr0085131 3 1 1 60 3R 22941723 22941744 GTGAAGGGTTCTTACATAGGAC 58 22941684 22941702 TCTTGTGCTTTCTCTTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34292 FBgn0085321 FBtr0112488 3 1 1 60 3R 22888387 22888408 TTCCGAATATGCAACAGATGAC 59 22888427 22888447 TGTATCTTCATCGTCAATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17198 FBgn0039366 FBtr0084924 3 1 1 60 3R 21599247 21599269 GGAATAATTTGACCCTGATCCTG 59 21599209 21599229 ATATTTGGCGATAGGCAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 2 3 3 152 3R 20647311 20647329 TTGCACAAGAACAACACAG 57 20647445 20647531 ATAACGCTTGTTACCGAGG 57 NA Drosophila melanogaster 61 CG33341 FBgn0053341 FBtr0084613 2 1 1 111 3R 20194653 20194674 TGGAATCAGAACAAGTACAGTG 58 20194743 20194822 CAATGCCAATCAATGAACTGAG 58 NA Drosophila melanogaster 61 Apc2 FBgn0026598 FBtr0084552 1 1 1 82 3R 19990523 19990604 CTGCTACAGGTTCTTGCTG 58 19990648 19990668 CCCAGCTCGTTAAAGATAGTC 58 NA Drosophila melanogaster 61 CG33337 FBgn0053337 FBtr0084485 2 1 1 80 3R 19416874 19416963 TTCGCAAATGATATGTGCCT 58 19416813 19416834 TAGCAGGATAGGAGATATGAGG 57 NA Drosophila melanogaster 61 CG13827 FBgn0039068 FBtr0084376 2 1 1 89 3R 19084260 19085409 CGAGATAAGGTGATGAAGGC 58 19085461 19085479 GTATCGCTTGGCTAGTTCC 58 NA Drosophila melanogaster 61 CG17244 FBgn0039031 FBtr0084340 2 1 1 75 3R 18803140 18803158 AACTACGACGACCACAGAG 59 18803197 18803215 ACAGTCCTTCGGGATTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5346 FBgn0038981 FBtr0084289 1 1 1 80 3R 18347503 18347765 CGATGAGAAGCTCAAGACTG 58 18347442 18347460 CGGATATAGTGCTGTCGGA 58 NA Drosophila melanogaster 61 NELF-A FBgn0038872 FBtr0084051 1 1 1 80 3R 17054078 17054160 CTCTATCGAACGAACACGTG 58 17054203 17054221 TAAGGGCTTTGTCAGGTCG 59 NA Drosophila melanogaster 61 CG31189 FBgn0051189 FBtr0300817 1 1 1 101 3R 16870996 16871015 GATTACCCTGACCATCAAGG 57 16870857 16870933 ATGATCCATCGATCCAAGTC 57 NA Drosophila melanogaster 61 CG10827 FBgn0038845 FBtr0084048 3 1 1 81 3R 16831306 16831481 TACGCAGGATACTCGTACC 58 16831243 16831262 GAACCATGTATGGTTTGCCA 58 NA Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083837 1 1 2 93 3R 15883079 15883164 AAACATGACGCTCGAACAG 58 15883004 15883022 CATGTCGCACTTCAAGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 koko FBgn0051232 FBtr0289999,FBtr0083625 1 2 6 134 3R 14225621 14225639 TATCCAGCGATCCAACCAG 59 14225797 14225815 TTGGACAGATCCTGATCGG 58 NA DesignNoJunction Drosophila melanogaster 61 repo FBgn0011701 FBtr0083564 3 1 1 125 3R 14063131 14063564 AAGAAGACGAGAACCACCT 58 14063653 14063671 GGATTCGCTCAGATTCAGC 58 NA Drosophila melanogaster 61 CG7175 FBgn0038584 FBtr0083609 3 1 1 109 3R 14049040 14049058 AGAAGGAGGATCTCAAGCC 58 14048897 14048968 ACGATAGGAACTACCCAGAG 58 NA Drosophila melanogaster 61 ND23 FBgn0017567 FBtr0083191 3 1 1 103 3R 11661999 11662086 ATTCTGTCAGGAAGCCTGTC 59 11661915 11661936 GAAGCTTCTCCTTGTTGTACAG 59 NA Drosophila melanogaster 61 Mst87F FBgn0002862 FBtr0082884 3 1 1 199 3R 9653356 9653375 TTATTTGTCCTTTCGGCCTG 58 9653086 9653104 ACATTCGGTCCATAGCAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 yellow-e3 FBgn0038150 FBtr0082759 1 1 1 81 3R 9230232 9230250 GTATCCCAACGAGGAGTGG 59 9230105 9230189 GCACTCGTCGATATAAGTCCT 59 NA Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 1 3 3 91 3R 8825930 8826123 TGCTGACATACATTCTGGAC 57 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082721,FBtr0082720 3 2 2 63 3R 8822948 8822967 AAGATGTCCAAGGGAAAGAC 57 8822904 8822922 AGCTCTGGTAGCACATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 d-cup FBgn0038089 FBtr0082683 3 1 1 81 3R 8718223 8718243 AGATCATTTCATCTTCGGTCG 58 8718286 8718357 AAATCGACCATGTCCAGTC 57 NA Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 2 1 1 71 3R 8463103 8463124 GCCTTTATGTTCATATTGGCCA 59 8463153 8463281 GAGTTGAAGAAAGTGCTTTGGA 59 NA DesignNoJunction Drosophila melanogaster 61 glo FBgn0259139 FBtr0089917,FBtr0089919 2 2 3 80 3R 7642966 7642984 TGTTCAGTTCGAAAGCCAG 58 7642468 7642924 ATCTCAATATACCTGTGCCCA 58 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 3 3 3 75 3R 7504709 7504729 CATATCTGGTGGTAGCAAGTC 58 7504583 7504672 TTTGGTAAGCATGGGAGTG 57 NA DesignRelaxed Drosophila melanogaster 61 Skeletor FBgn0020517 FBtr0091656 3 1 1 100 3R 6519561 6519709 GAAACCAAGATGGCATCCG 59 6519773 6519791 ATTCGGAATCGGGTTCTGG 59 NA Nonspecific Drosophila melanogaster 61 P58IPK FBgn0037718 FBtr0082074 1 1 1 125 3R 5413100 5413118 AGTGACCTGCTCATGATCG 59 5413268 5413288 CAGATGGTTCTCAATATCCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG16736 FBgn0037668 FBtr0081985 2 1 1 120 3R 5083100 5083118 ATGGTCCTGGGTATAACCG 58 5082878 5083016 AATTTCGATAGTTGCGCCT 57 NA Drosophila melanogaster 61 CG9731 FBgn0037640 FBtr0081929 1 1 1 60 3R 4688351 4688370 GAGTGGAGTGTACCAAATCG 58 4688310 4688329 ATCGCGTAGAAACATCTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8202 FBgn0037622 FBtr0081914 1 1 1 80 3R 4559078 4559097 ACCCTAACGTCGAGTAAGAC 59 4559139 4559218 CACGAAGCGAAAGATCTGAG 59 NA Drosophila melanogaster 61 Mst84Dc FBgn0004174 FBtr0112841 3 1 2 68 3R 3190260 3190341 GCTTCTAAAGACCACTTCTCG 58 3190212 3190230 AGTAATATCCGCAGCACGA 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14608 FBgn0037487 FBtr0113201 1 1 1 80 3R 3063252 3063270 GAAGACCTCGTTCAGTTGC 58 3063309 3063393 CAGATATGAAAGACCTGACAATCG 59 NA Drosophila melanogaster 61 CG10098 FBgn0037472 FBtr0081563 2 1 1 110 3R 2950776 2951151 TATAGTGCGCTTGACTTTGG 58 2951222 2951242 GCGATGAAGTTTAGTTTGGAG 57 NA Drosophila melanogaster 61 CG11459 FBgn0037396 FBtr0078623 3 1 1 60 3R 1852895 1852914 CTCGTCTGACCGTAGTACAC 59 1852854 1852872 GCAGTCAAACCTAGCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31546 FBgn0051546 FBtr0078737 1 1 1 61 3R 1460688 1460706 TGTGATTCGCACCAATCTG 58 1460645 1460663 GAAATTCGGCGTAGCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1427 FBgn0037347 FBtr0273377 2 1 1 80 3R 1427573 1427643 GTATAGCCTGCAAACTCGTG 59 1427685 1427704 GTGCCTCTAGTAAGTCTCCA 58 NA Drosophila melanogaster 61 CG14668 FBgn0037320 FBtr0078801 3 1 1 62 3R 1212971 1212989 GTCCGTAAATCCGGTTGAG 58 1212927 1212945 TCGTACTTCTGAAGCAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kkv FBgn0001311 FBtr0078798,FBtr0301398,FBtr0078800 1 3 3 85 3R 1205150 1205228 GGACCAACTAATAGATAAGCATGC 59 1205088 1205106 AGTCATTGTCGTAGTCGCC 59 NA Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 1 2 2 92 3R 1081335 1081415 ATATTCCAGGAGAAGCGGC 59 1081261 1081279 TTTGATCGTCTGCTAGGGC 59 NA Drosophila melanogaster 61 Cont FBgn0037240 FBtr0078917 1 1 1 80 3R 210771 210855 GGACGCATTATTGTAGATTGGA 58 210896 210914 GACAACGCATTCGTAGTCC 59 NA Drosophila melanogaster 61 tRNA:E4:62Ab FBgn0011852 FBtr0072686 1 1 1 60 3L 1397940 1397961 TGTCTAGTGGTTAGGATATCCG 58 1397982 1398000 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr011:3L FBgn0083068 FBtr0091958 3 1 1 167 3L 11090148 11091196 GGACGTTTACGACGTTCTC 58 11091327 11091345 GAGGGCTAATGAACAGCTG 58 NA Drosophila melanogaster 61 CG11425 FBgn0037167 FBtr0078507 3 1 1 60 3L 22468355 22468373 CAGCTGCTTAGATGAGTCG 58 22468397 22468415 CCGACACTCGTAGTCTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 2 3 3 120 3L 21719351 21719369 AATCATTCGCCCTCAAGGA 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 Edg78E FBgn0000551 FBtr0078408 3 1 1 113 3L 21290724 21290819 ATATCTGTTCTGTCTTGCTCTC 57 21290632 21290650 TACTGGTAGTTGCCCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17122 FBgn0036962 FBtr0074849 2 1 1 60 3L 20268015 20268035 ACTTGGAGTCGAAATACAAGG 58 20267975 20267996 TTAAGCAGCTTTATTTCGGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp76A FBgn0015586 FBtr0075038 2 1 1 190 3L 19044295 19044314 GGATGTTCACTTGCTACTGC 59 19044055 19044147 CAACTACTTCTAAACGGAGAATGG 59 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242,FBtr0089387 1 2 2 93 3L 18480882 18480900 CAGGAAACTTCACACCGTG 59 18480594 18480825 ACTTATGACCGTGAGCACC 59 NA Drosophila melanogaster 61 CG13725 FBgn0036708 FBtr0075248 3 1 1 60 3L 17318387 17318410 GGGATATTAGATCTCTTCTGTTGG 58 17318350 17318368 CGGTCAGCGGAATATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9715 FBgn0036668 FBtr0075330 1 1 1 80 3L 16838602 16838680 TGAGTGATCTTGAGGAGATGG 59 16838722 16838740 CATCGCTGTAGTGGATCGA 59 NA Drosophila melanogaster 61 Notum FBgn0044028 FBtr0075436,FBtr0075435 1 2 2 60 3L 16016999 16017019 AAATGGATTAAGCCACAGCAG 59 16022392 16022410 GACTGAACGTGGCTAAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299851 2 1 2 91 3L 15625056 15625075 CACTGCTCATCGTCTTTGTG 59 15607109 15625002 GTGATTGGCACGGTATGAG 58 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075692 2 1 2 156 3L 14788829 14788978 CCAATGATTCTACAAGGATCATCC 59 14789091 14789111 GTAGTGAAGAAGGTCAAGGGA 59 NA Drosophila melanogaster 61 CG7924 FBgn0036416 FBtr0075740 3 1 1 81 3L 14226599 14226617 CAATATCACTTGGCCGCAG 59 14226723 14226742 TAATCCGACCGATTTCTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487,FBtr0302488 1 2 2 80 3L 13456649 13456669 CCTCTTTGCTTTCAAACAAGG 58 13456708 13456788 TAAAGAAGCTTCAGACACTTGG 58 NA Drosophila melanogaster 61 eIF-2beta FBgn0004926 FBtr0075968 1 1 1 113 3L 12518771 12519097 ACAAAGAGAACGACGAGGA 58 12518676 12518694 TGTCCGGATTCTTGTCGAG 59 NA Drosophila melanogaster 61 l(3)S147910 FBgn0086699 FBtr0075960 2 1 1 60 3L 12517559 12517578 TTCGAGGACATAGAAAGCCA 58 12517598 12517619 TTTCACTCTGTTGATTCTTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32095 FBgn0052095 FBtr0076077 3 1 1 60 3L 11817840 11817860 CCAATACTCTTACCGCAATCC 58 11817800 11817818 ACAAAGGCCGGAACTAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 1 2 2 60 3L 11641278 11641355 AGAAGACCTGCGAAGTTCC 59 11641236 11641254 CTCGTGCTTCAATGTGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34456 FBgn0085485 FBtr0112762 3 1 1 61 3L 9355701 9355719 CAAAGCTTCTACCACCGAG 58 9355744 9355762 TATACAGCCGTTTCCTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 3 2 2 67 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529282 8529300 GTAGAACTCCTCCCAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7120 FBgn0035888 FBtr0300279 1 1 1 84 3L 8393715 8393733 CTTATCAGAGCCATGCCCA 59 8393778 8393858 TGTCGTCCACCTTATTATAGCC 59 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 2 1 1 100 3L 7888728 7888799 AAATCTCGGTTTGGACTGC 58 7888863 7888881 CTGCAAACTATGCGATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 3 2 2 152 3L 5788242 5788665 TTGTCCAAACAGCATTGCC 59 5788108 5788126 GTTCTGCATATCCTCGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Pmi FBgn0044419 FBtr0299940,FBtr0299941 2 2 2 60 3L 5773857 5773940 CCATGTTGTCAATATCAGGTGG 59 5773961 5773979 CTGTCAGTGGCAGTTTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5150 FBgn0035620 FBtr0077086 3 1 1 60 3L 5589073 5589095 TGTACCTCAACCTCATATCTCTG 59 5589115 5589133 CATTTACGCCGATGGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14952 FBgn0035377 FBtr0073013 1 1 1 81 3L 2847719 2847737 GAGCTTACAAACAGCTCGT 58 2847656 2847674 CTTGCAACTCTTGGTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42234 FBgn0250756 FBtr0290136 3 1 1 134 3L 1924957 1924975 GTCGCAATCCCTACATGAG 58 1925349 1925427 TCTGGGAATCTGAGAAGACG 59 NA Drosophila melanogaster 61 CG18171 FBgn0035262 FBtr0072800 2 1 1 60 3L 1722567 1722585 GTACATGGAGCTGGTGGAG 59 1722525 1722545 TTCGGTCATCTCTTTCTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072808 3 1 5 189 3L 1664015 1664102 GCTAGTCTTAAAGACGCACC 58 1661518 1661536 GATATGTTGAAGGCCTCGC 58 NA InUTR Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 2 2 2 110 3L 987333 987351 GAACTACGGCACCAATCTG 58 987425 988752 GAACGAACAATCCTTCCGT 58 NA Drosophila melanogaster 61 Gr61a FBgn0035167 FBtr0072585 3 1 1 102 3L 841849 841927 AGCCATCAGGCCATATCTG 59 841991 842011 GCTCCTTACCTTGAACTTCAC 59 NA Drosophila melanogaster 61 Rev1 FBgn0035150 FBtr0072557 1 1 1 85 3L 657511 657529 TCTCAAGCAGGTTTCTCGT 59 657578 657660 TATTGATGATCCGGCACCA 59 NA Drosophila melanogaster 61 snoRNA:Or-aca4 FBgn0082922 FBtr0113512 1 1 1 60 2R 13504275 13504293 GTGGCAAGAGTAGCTACTG 57 13504317 13504335 TTTGATCTACCTTCAGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33441 FBgn0053441 FBtr0086433 1 1 1 60 2R 15621270 15621288 ATACATCGGTTCTCGTCCG 59 15621228 15621246 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300252,FBtr0300253,FBtr0300231 1 4 4 108 2R 10510741 10510932 TCCTAAGATGATGTGACCCAG 59 10511213 10511237 CCTTTATAGTTCTTCTGAAGTCCAG 59 NA Drosophila melanogaster 61 Peb FBgn0004181 FBtr0072454 1 1 1 109 2R 21064124 21064208 GACAATTGATACTCGTCCTTTCTC 59 21064038 21064056 TATGTCTGCCAAACCCTGG 59 NA Drosophila melanogaster 61 CG34038 FBgn0054038 FBtr0299878 1 1 1 138 2R 21056594 21056615 CGTCTTAATTTACTAAGCCACG 57 21056714 21056795 TAACTGAAAGGAAACCGGC 58 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300186 3 1 4 87 2R 20443017 20443035 CATGTTCTTCCGACTGGAC 58 20443084 20445562 GCATTCTTGCTTGCATAATCG 59 NA Drosophila melanogaster 61 itp FBgn0035023 FBtr0300187,FBtr0290219 2 2 4 80 2R 20443080 20443813 ACACCGATTATGCAAGAAAGAC 59 20443852 20443872 TCCTCTTCGGGTATTAACAGC 59 NA Drosophila melanogaster 61 CG30419 FBgn0050419 FBtr0072275 3 1 1 81 2R 20116650 20116670 GAAATCTACTTCGAGAGTCGC 58 20103096 20116610 GATACAGCAGTATCTTGTTGGA 58 NA Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192 3 1 2 106 2R 19921090 19921214 GACATACAGACAAGCCGAC 58 19921002 19921020 TCGTCAATGTTCGCTTGAG 58 NA DesignRelaxed Drosophila melanogaster 61 gbb FBgn0024234 FBtr0072127 3 1 1 69 2R 19739424 19739442 GACGATCATGCACAGAGTG 58 19739475 19739493 CAGGAACTCGAGGATCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 3 4 4 157 2R 19275058 19275076 GCTGACCTGAAAGTAGCAG 58 19275256 19275274 TTAGTCTGTACCTGGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 RpL37b FBgn0034822 FBtr0071978 3 1 1 118 2R 18987791 18987809 CAGAAATCGAAGTGCTCCC 58 18987691 18987709 TTCTTGAGGTACCGCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30195 FBgn0050195 FBtr0071931 3 1 1 118 2R 18534598 18534616 GTGTGAGAAGTCTGGAACC 57 18534443 18534463 AATAGTGATTGATGTCCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840 1 1 2 93 2R 18313877 18313895 TACATGTGGGTCATCCACG 59 18313744 18313820 ACTCCATAAGCCAGAGCAG 59 NA Drosophila melanogaster 61 CG10440 FBgn0034636 FBtr0071692 2 1 1 84 2R 17449352 17449370 GACTTCTGATTGCCGAGGA 59 17449084 17449304 TGCTTAATCATCGGCTCCA 59 NA Drosophila melanogaster 61 CG18107 FBgn0034330 FBtr0086663 1 1 1 80 2R 14272189 14272271 TTTGGCCAATGCTATTCCG 58 14272314 14272333 CCACGAACATTGCAATTCAC 58 NA Nonspecific Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 3 3 3 103 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471728 12471746 AGATCCGAAAGATCCTGCT 58 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152,FBtr0087153 2 3 5 60 2R 12249825 12249843 CAGCACGATCCAGATTGTC 58 12249867 12249885 CGACAATTAGTCCTGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299971 2 1 2 60 2R 12179210 12179283 AATTCAGCTTTAAGCGCGG 59 12179306 12179325 CAGCATTCCTACAGAATGCG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ir52b FBgn0050469 FBtr0273350 2 1 1 60 2R 11389572 11389591 GCAGCCTTACTCTGATACTC 57 11389610 11389632 GTACTATTAGGTCCTCCATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp49a FBgn0050052 FBtr0087872 3 1 1 105 2R 8578189 8578207 AAGTTTGACATGACTCCGC 58 8578041 8578120 AGGAGAAGAAGCATGGTGG 59 NA Nonspecific Drosophila melanogaster 61 CG30056 FBgn0050056 FBtr0087823 1 1 1 60 2R 8449764 8449783 TCAAGCTTGACAACCAAACG 59 8449806 8449824 GAGGCCATTAGAAGGAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13197 FBgn0062449 FBtr0088078 3 1 1 80 2R 7578901 7579008 AAGGACATACCAGACAGATGG 59 7579046 7579068 CACCTTAAAGGCTATGAAACGAG 59 NA Drosophila melanogaster 61 alphaTry FBgn0003863 FBtr0088161 1 1 1 68 2R 7232218 7232236 GTCTGAGCTCTTCCCTGAG 59 7232168 7232186 TAGCTGGGTTGTAAGTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpb5 FBgn0033571 FBtr0088237 2 1 1 60 2R 6785953 6785973 AGGAGAACATGTTGATGAGGA 58 6785913 6785931 TTGAGTCCAAAGTACCGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12917 FBgn0033490 FBtr0290287 1 1 1 151 2R 6025374 6025456 CTTTCTGGCTTGGGAAGTG 58 6025569 6025589 AGTACACGAGTAGAGTGACAC 59 NA Drosophila melanogaster 61 CG13741 FBgn0033374 FBtr0088632 2 1 1 80 2R 4981928 4982013 AGTCATTCTGTCTTTGGATGAG 58 4981869 4981888 GCATTACTCGAGTATCGTGG 58 NA Drosophila melanogaster 61 Or43a FBgn0026389 FBtr0089051 1 1 1 80 2R 3120822 3120936 ACACCCGATGGAGATAAGAG 58 3120761 3120780 GAGTAGGACGCATTCAACAG 58 NA Drosophila melanogaster 61 CG14471 FBgn0033049 FBtr0085970 1 1 1 60 2R 1885596 1885616 GAACACCTATATCCTGATGCC 58 1885638 1885656 CACTACACCTGCTTGTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-640b FBgn0083025 FBtr0113543 3 1 1 81 2L 20419040 20419058 TCGTGTCTACAATGCTCCA 59 20419103 20419121 GTTGGCAACCATCTTAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503,FBtr0301276,FBtr0081504 2 3 3 80 2L 21137683 21137771 CTGAACAGATCTTGGACAAGG 58 21137623 21137642 CGTCCTTATCAAACGACAGC 59 NA Drosophila melanogaster 61 RPA2 FBgn0032906 FBtr0081438 1 1 1 86 2L 20925323 20925341 GAGCAATGTTTCCGAGGAG 58 20925166 20925275 AGAATGTTGGTCAACTCAGAG 58 NA Drosophila melanogaster 61 CG31676 FBgn0051676 FBtr0081424 1 1 1 93 2L 20845445 20845463 ACTGGAGCTACGTGAACTG 59 20845520 20848566 TTGCCGTAGACTTCTTGCA 59 NA Drosophila melanogaster 61 CG9323 FBgn0032883 FBtr0081459 2 1 1 87 2L 20755421 20755496 CAACTACAAATTTCTGGCATCG 58 20755355 20755374 TATAATGGCCCTCAGTAGGG 58 NA Drosophila melanogaster 61 CG10628 FBgn0032818 FBtr0081323 1 1 1 90 2L 19757879 19757957 TTATCCCTTTACCACCATCCG 59 19757809 19757827 GATCAGACCGGGAAGATCG 59 NA Drosophila melanogaster 61 CG17564 FBgn0032768 FBtr0081225 1 1 1 102 2L 19298576 19298649 GCGAAGAGATGTACATTCGT 58 19298493 19298512 GATTTCCTTTACAACGCCAG 57 NA Drosophila melanogaster 61 CG31742 FBgn0051742 FBtr0081025 2 1 1 60 2L 17991187 17991210 CAGTATATCATGCTACCATGACAG 59 17991225 17991247 ATGTGATATAGTCTCACCACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aac11 FBgn0027885 FBtr0081001 1 1 1 91 2L 17476212 17476230 TTTCGTCGAGGATGCAGAG 59 17476077 17476163 CCTCCAGTTTCTTAATATAACCCTG 59 NA Drosophila melanogaster 61 crp FBgn0001994 FBtr0080854 1 1 1 80 2L 16287139 16287160 GGAGGAAGTTATTCTAGAGCAC 58 16279152 16287100 GAATCCTCTAGTTGCAATTGC 57 NA Drosophila melanogaster 61 Rh5 FBgn0014019 FBtr0080291 1 1 1 80 2L 12008613 12008634 CTACATTGCCTTTATCGTCCTC 59 12008670 12008751 GATTTCGAAGTCGAGAATATCCAG 59 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 1 2 2 82 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492702 10492794 TAATGGACGTCAACTCCCT 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089735,FBtr0089737,FBtr0089736 3 4 4 184 2L 10264626 10264775 CAAACTAGAACGCAGCAGAC 59 10264982 10265001 GGTCATTGTTGGTTGGAGTG 59 NA Drosophila melanogaster 61 CG3841 FBgn0032131 FBtr0079836 3 1 1 170 2L 9590519 9590537 CATGGGAAACGTATCAGCT 57 9590671 9590751 TTTCCAAGTGCACATTTGC 57 NA Drosophila melanogaster 61 CG13397 FBgn0014417 FBtr0079711 3 1 1 85 2L 8411344 8411363 GTAGAGTAATCGGCGAACGA 59 8411199 8411299 CATGCTAATCTGAAAGCTTCGT 59 NA Drosophila melanogaster 61 CG13786 FBgn0031900 FBtr0079409 3 1 1 192 2L 7251659 7251677 AAGTTGCGACGAAGAAGAG 58 7251361 7251451 TATTGGACTTGATGGCCCT 58 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 1 3 3 107 2L 7057578 7057596 ATCGAGCTGTCTTTGACGA 59 7057667 7057874 GTCATTTCCACCTGTCGTC 58 NA Drosophila melanogaster 61 CG34310 FBgn0085339 FBtr0112506,FBtr0112507 1 2 2 91 2L 6674206 6674225 ACTGAAACTAGTGGAACCAC 57 6674356 6674374 GTCGATCCAATACCGATGG 57 NA DesignNoJunction Drosophila melanogaster 61 Pez FBgn0031799 FBtr0079284 3 1 1 80 2L 6334035 6334120 GCTTCCTCCATATCTGCCA 59 6333973 6333992 CATGGTAAGCGGTTCTTGTG 59 NA Drosophila melanogaster 61 H2.0 FBgn0001170 FBtr0079227 1 1 1 127 2L 6013695 6013713 GTCTTCTCGAATCTGCAGC 58 6013484 6013604 AACCACACCTTGACCTGAG 59 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 1 1 3 74 2L 4879194 4880309 TTAACGACTCACACGGGAG 59 4879138 4879156 CAGATAGTCCTTCACGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15423 FBgn0031580 FBtr0077506 2 1 1 60 2L 4006168 4006186 GGCCAATTGTAGAGGTGGA 59 4006210 4006228 CCGATCTCAATCACTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 slp2 FBgn0004567 FBtr0077500 1 1 1 60 2L 3838116 3838137 CAATTTCTTACCTATCCTCCGA 58 3838156 3838176 TATAACGCTGATACATGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31955 FBgn0051955 FBtr0077540 3 1 1 80 2L 3712545 3712566 CGTGTTTATGAATACAGTGAGC 57 3712434 3712506 CTGGTGGAGTATATTGTAGGC 57 NA Drosophila melanogaster 61 CG5001 FBgn0031322 FBtr0077972 1 1 1 211 2L 1192003 1192022 TTACATATCAGTTCCACGGC 57 1192196 1192271 TGATCTGAAAGAGGGCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5080 FBgn0031313 FBtr0077981,FBtr0077982 3 2 2 81 2L 1161974 1161992 CCCATCAATGGGATCTTCG 58 1161854 1161929 TGTACTTCTCCTCTTGCGT 58 NA Drosophila melanogaster 61 CG2839 FBgn0031273 FBtr0077999 2 1 1 60 2L 625851 625869 GTACACTGCCAATTTCCGA 58 625888 625911 TCCTTCTATCCTGTCTAGAATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 2 2 2 80 2L 411178 411199 TACTCTATTCGTGAGGAAATGG 57 411051 411140 GTCCACATACCAGGTATAATCC 57 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089431,FBtr0089430,FBtr0089436,FBtr0089435,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437,FBtr0089428 3 10 10 94 2L 113289 113308 CGGAACTTCTCACAAGTCAC 58 113365 113447 GCAGGTTTAGGTCCTTGAC 58 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078049 3 1 5 133 2L 344479 344583 AACAAGAGTCTCGAGCCTG 59 344680 344698 TGAGTTCTGCCATCCAGAC 59 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 1 4 5 96 2L 344409 344427 GAAATCCAGTCCGCTAGAG 57 344484 344570 CGGAGAAAGACAATTAAGACTC 57 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 1 4 4 80 2L 872013 872035 CAATCGCCTCAAGATAAACTCAG 59 872075 872220 AGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987 1 1 2 99 2L 1117505 1128136 CTTCATAGTGCCATCAGCAG 58 1116672 1116690 CAGACCGAGATTGTGATGC 58 NA Drosophila melanogaster 61 Cdlc2 FBgn0026141 FBtr0077925 3 1 2 122 2L 1344489 1344508 CAAGAGCCGGATAGACAGAG 59 1344647 1344665 ATCTCCTCGCTCATGTCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 2 1 1 60 2L 1352714 1352734 AGCTATTGCATCTTCGATCTG 58 1352618 1352637 CCCTCTTATAGACATGACGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 1 2 2 80 2L 1746020 1747700 GCGAAACTACTTTCTGCTG 57 1747743 1747762 ACGTTCATGTACAGATACCC 57 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301066 2 1 3 156 2L 2024118 2024136 TATAAGGGACGTCCTCCAG 57 2024254 2026776 AGGAGATTCCCATTGATTCAC 57 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 2 4 4 98 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492328 2492346 ACGCGATCGTAGATAAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 1 1 1 71 2L 2696062 2696082 CATACAGCGATACTTGAACGT 58 2695953 2695971 AGATGGAACTTGGACGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 3 2 2 156 2L 2850267 2850342 ACATGAAGGATCGAGCCAC 59 2850129 2850148 ATGTGATCCTGTCCCATCTG 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 1 3 6 81 2L 3097976 3097994 CAACAGACAACCAAGGGAC 58 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 2 4 4 81 2L 3780571 3781917 GGATCACAGGTATATTCACTCCA 59 3781958 3781976 CAAGGTTCTCGATTGGCAG 58 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 2 1 3 79 2L 4880294 4880314 AACATTTAACGACTCACACGG 59 4879138 4879156 CAGATAGTCCTTCACGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077397 1 1 6 80 2L 4912768 4915057 TACGAGGATGACGAAGTAACAG 59 4912709 4912727 TAGACTGGGATCCTGACGA 59 NA Drosophila melanogaster 61 CG14042 FBgn0260451 FBtr0110983 2 1 2 61 2L 5039982 5040000 CGACTATCTGAGCGAGGTG 59 5040025 5040135 TCTCCAGCTGATTCACCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301907 2 1 6 83 2L 5044592 5044610 CATTTGGCCCGATTACTGC 59 5042879 5044545 TTTCGCCTGCTTGTTTCAC 59 NA InUTR Drosophila melanogaster 61 Hel25E FBgn0014189 FBtr0079123,FBtr0079125,FBtr0079124 1 3 3 82 2L 5539759 5539779 CTTAACGAAGTACAGGATCGT 57 5539635 5539717 CGTCCCTCAATGTATGTAGAG 57 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 1 1 2 105 2L 5765981 5765999 TCAGTGCTCTATTGTGCGT 59 5763302 5763320 TAAGAGTCGCACTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 2 3 3 80 2L 5769936 5770024 AAGGCACCCAGAGTATTTCC 59 5769875 5769894 CTGTAGCTCTGTCTTGTCGT 59 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 1 2 2 82 2L 5892815 5892833 ACTACTTCGCGGTGATCTG 59 5892690 5892710 AGACTGAACGCTTATAAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 3 3 3 185 2L 6049339 6049424 AAGAAACAAGATGCTCGGC 58 6049573 6049591 CTCGATCCGAAGTATCCGT 58 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0079307,FBtr0079306,FBtr0110778 3 3 3 102 2L 6721258 6721279 GGACAGAACAACTACAGAAGGA 59 6721121 6721195 AACTTTGCAAGCGTTTGGT 59 NA Drosophila melanogaster 61 CG10399 FBgn0031877 FBtr0079351 2 1 1 75 2L 6960453 6960471 CACCAATTCGCTCTATCCT 57 6960569 6960587 ACAATTCGCACCTGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 1 7 7 82 2L 7036655 7036674 AGATCGATGCCATTCAACTG 58 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079458 2 1 5 119 2L 7455749 7461586 TTCACAAGGTGTTGAAGAACC 59 7455650 7455670 TGGTTACAATGGTGTACATGG 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605,FBtr0112603 1 2 4 147 2L 7501515 7536282 TTTCTCAGAACCACCATCG 57 7501386 7501404 GAGTGATTCATCGAGTGGC 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079510 3 1 5 81 2L 7696803 7698741 TTATCCTTACAACACTGGTCCT 58 7696743 7696762 ATATCTTGGGCGGGTAATCC 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 2 4 5 60 2L 7896744 7975196 AAAGAAAGGCGGAAATGCT 58 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079539 1 1 4 135 2L 8031451 8031471 TCAGCTGGACACTTAGAAGAG 59 8031568 8032070 TACGCTATATCCCAGCTGC 59 NA InUTR Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079539 3 1 4 136 2L 8031450 8031471 TTCAGCTGGACACTTAGAAGAG 59 8031568 8032070 TACGCTATATCCCAGCTGC 59 NA InUTR Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 1 2 2 81 2L 8391200 8391292 GCAAAGCGACTTACAAGGG 59 8391137 8391159 CCTTGTCACCAAACTTTAGAAGG 59 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930 1 1 3 88 2L 8664757 8666335 GTGATTGAGACACAGCCAC 58 8666387 8666405 GATTGCGGTTGAACTGGTG 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 3 3 4 182 2L 9519249 9519269 TCATACTGGGTCATCTTTGTG 57 9519472 9519730 AATCGGTGATTCTCTGCTG 57 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079843 2 1 2 172 2L 9643297 9643403 TAAAGTGATGCAGACCCTGG 59 9643532 9643556 CGGTCTCTAGAAGATTGATAATCTG 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079914,FBtr0079915 3 3 6 136 2L 9807416 9807435 CTATACAAATTCGTCGCCGT 58 9802427 9807317 AATTGTAACTCCCAGCGTC 57 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 1 6 9 90 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905038 9905141 AGTATTAGCGACGAACGGT 58 NA Drosophila melanogaster 61 CG4658 FBgn0032170 FBtr0079886,FBtr0079885,FBtr0079887 2 3 3 81 2L 9957835 9957854 GAGATTCTCAGGGAGCAGAC 59 9957898 9957975 GCGGAAAGACTTGTGACAC 59 NA Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 1 2 2 97 2L 9962388 9962406 TGCTACTCAACGTACTGGT 58 9962051 9962328 GAGGAAATTCTGAAGCAGGG 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 2 5 6 100 2L 10399597 10399615 AATGCATCAGGGAAAGCAC 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 2 2 3 81 2L 10581364 10581435 TTCTTTCGCAAGCACACTC 59 10581301 10581320 GAACCGTTCCTTGAGTTGTG 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 2 9 10 93 2L 10826076 10830608 GGTCGCGAGATTCTTTCCT 59 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 3 2 2 141 2L 12094704 12094780 AAGGAAAGGTACCAGAAGCA 59 12094884 12094902 CGTAGTCTTGCAGTTTGCG 59 NA InUTR Drosophila melanogaster 61 Pect FBgn0032482 FBtr0080440,FBtr0080442,FBtr0080441,FBtr0080439 1 4 4 83 2L 13209527 13209545 TCAGTTCTTGCCGACTACC 59 13209589 13209670 GCCACATAAACAATCTTATCGC 58 NA Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 1 2 2 80 2L 13971670 13971748 CGATTGCTATCAGAAGTGCA 58 13971790 13971809 TCATGGTAGGTATATCCCGG 57 NA Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 3 2 2 81 2L 13971669 13971747 CCGATTGCTATCAGAAGTGC 59 13971789 13971809 TCATGGTAGGTATATCCCGGA 59 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 1 3 3 104 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 3 2 2 94 2L 15117483 15117563 AAGGATAGGTGCTGGTTCC 59 15117621 15117639 CAAGCATTGTTACTGGGCA 58 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 2 3 4 80 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313385 16313403 AACTGTCATGGGATTGCCA 59 NA Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080847 3 3 4 81 2L 16313443 16314465 CTAGACGATACGAAGATGTACGA 59 16313384 16313402 CAACTGTCATGGGATTGCC 59 NA Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 2 1 1 81 2L 16366546 16366564 TATGAAGGCGTGAGGACAC 59 16366673 16366691 GTTCATGCAAATCTGCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 3 1 1 82 2L 16366544 16366562 TTTATGAAGGCGTGAGGAC 57 16366672 16366690 TTCATGCAAATCTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13284 FBgn0032614 FBtr0080927,FBtr0080926 3 2 2 135 2L 16843617 16843635 TACACCGATCGGGTAATGC 59 16843382 16843521 TCATAATGGCATACTGAATGCC 59 NA Drosophila melanogaster 61 beat-IIIb FBgn0053179 FBtr0273450,FBtr0273449 1 2 2 80 2L 16986135 16990245 GACATGATTGTTGTGGTGACC 59 16990287 16990305 GACCATGTCGCCAATTTGG 59 NA Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 1 2 2 86 2L 19009004 19009022 AAGCAGACCTTGAAGACCC 59 19008531 19008954 GATCTCGGACTTCCTCAGG 59 NA Drosophila melanogaster 61 CG10561 FBgn0002036 FBtr0081155 3 1 1 68 2L 19114809 19114827 AACTCCAGGAAACTAGGCC 59 19114921 19114939 ATTGTATAAGCTGCGCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fon FBgn0032773 FBtr0081223 3 1 3 81 2L 19385351 19385787 CAACAAAGCCACTACAGTACC 59 19385290 19385308 TACCGCTATAACCTCCACC 58 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 3 4 4 81 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391896 19391914 GCTTGTCAGCTCTTCAGTG 58 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107 3 3 6 94 2L 19510636 19510654 CTATCCGGGAACCACTCTG 59 19510127 19510579 CTGTGTAGTTCTTGTGCGTG 59 NA Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 3 2 2 67 2L 19768500 19768518 GATTACGGCAAGTCCATGC 59 19767979 19767997 TAGTGGGAAGTTCCGTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 1 3 3 98 2L 20688521 20688542 TCCCTCTACGAATATAATGGTG 57 20688325 20688464 CGAGTTGTAGTTATGTTGCTG 57 NA Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 1 2 2 128 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781805 20781823 TACTTATCCTTGGTGCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 1 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 2 6 9 94 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882382 20882401 GAGTATGTTCTTCACGTCGC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0081466 1 3 7 141 2L 21125431 21126168 AATCATCACCTGACTCGGA 58 21126272 21126291 ATATCTGTGTCCGGATTGTC 57 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 3 4 4 90 2L 21255232 21255250 AGGAACTTCGGTCAAGTCG 59 21255302 21255546 CATGATTTCCTGCAGTAGTGG 59 NA Drosophila melanogaster 61 nompB FBgn0016919 FBtr0301173 2 1 2 133 2L 21578833 21578851 TATGAGAGGTACGCATCGG 58 21578517 21578736 TCAAACTGCAGAAATCGCA 58 NA Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 2 3 3 142 2L 21627751 21627853 GTGACTCAACAGATGCTCC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 3 3 3 117 2L 22428776 22428854 GGATCCAGGTTGGATTGAC 57 22428677 22428695 GTCACTTCAGTGCATCCTG 58 NA Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 2 1 1 120 2L 22443168 22443187 TCGTATAGTCTATGCGACGT 58 22443329 22443347 TTTGGCAGGAACTGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 1 3 3 94 2L 22959943 22959962 AATCATTCACGAATCGTTCG 57 22959807 22959888 CCACTACAGCTTTAATTGCAC 57 NA Drosophila melanogaster 61 pncr003:2L FBgn0047133 FBtr0080921,FBtr0080920 1 2 2 80 2L 16840562 16841349 CTAGTAACCTAAGCCAGATGAC 57 16841390 16841408 CCATCAAAGTGCTCATCCT 57 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063 2 3 4 99 2R 1327170 1327188 CAACAACTGGCTATCCTGC 58 1327249 1328124 GATTCATAACGACTCCTTGCG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086058 3 2 4 102 2R 1604281 1604794 AGATACAGGATCGCTTCTACC 58 1604199 1604217 CATGAGGATTCCCGTTCCA 59 NA Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 1 2 2 80 2R 2126346 2126367 AGGATTCAGTCACAGCTATACG 59 2126405 2126498 TTTGCATACAACTGTATGGGTC 59 NA Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 1 1 1 162 2R 2536952 2536970 CCCAATCCCTCTAACGGAC 59 2539505 2539524 CTCTGATGTACTGACCACAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 1 2 2 80 2R 2722367 2722386 ATGAAATGGTGACAAGCACG 59 2722427 2723013 GTTGCATCTGTCCAAGATCTG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 1 3 6 85 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 1 3 6 85 2R 2814317 2814905 ACATCATCCAAACTATGCCAC 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 1 2 2 84 2R 2886624 2886642 TTCGTAGTGGCCTTCTTCG 59 2886754 2886772 GAATCAGCATGCAGATGGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 2 3 3 81 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 1 3 3 159 2R 3106665 3107971 GATAACGAGGTTCGTTACTGTC 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111075 3 1 59 80 2R 3250877 3250897 CACATAGACATAACCGACTGG 58 3249353 3250839 CAATACCAGGTACTTTCCATCAG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111084,FBtr0111051,FBtr0111085 2 3 59 80 2R 3219877 3228060 GATTGTGAACGTACCTCCCA 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 2 3 59 81 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241374 3241394 CATGGACTCCACAATATTGGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 3 3 59 82 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241373 3241393 CCATGGACTCCACAATATTGG 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 1 2 3 194 2R 3330873 3330958 TTTCCCATCCTCAAGTGCA 59 3331116 3331134 CACCTGGTAGCGGATACAG 59 NA Drosophila melanogaster 61 CG1621 FBgn0033182 FBtr0088984 3 1 1 96 2R 3379451 3379470 TCAGGATGTGAATTTGCCAG 58 3379310 3379328 ATTGGACAGGTTATTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0113382 1 1 6 91 2R 3520825 3520843 AACTATGAGTACTGGGCGC 59 3520897 3521729 GCTAGTTTGAGATGCTGCTG 59 NA Drosophila melanogaster 61 CG12159 FBgn0033232 FBtr0088889 1 1 2 162 2R 3803412 3803432 ACTGCTGCTTATTATGAGGGT 59 3802679 3802909 CTGAACCAACTCGAACAGG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 3 4 9 149 2R 4562375 4563993 CAAATGGACAGCTTCTGGG 58 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 CG8026 FBgn0033391 FBtr0302512,FBtr0088611,FBtr0302511 3 3 3 109 2R 5076504 5076585 CTGTACTTCATGTTCTACAACACC 59 5076418 5076436 AGAATTCCCGACTCAGCAG 59 NA InUTR Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 3 2 2 112 2R 5175029 5175047 TACCGATGGACTCAGAACC 58 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 Drep-2 FBgn0028408 FBtr0112930,FBtr0088597 3 2 2 91 2R 5184968 5184986 CAACAATACGGTGCTGCTG 59 5185039 5185789 TCGGTATAGCTGATATGGCAG 59 NA Drosophila melanogaster 61 Pdk FBgn0017558 FBtr0112892 2 1 2 83 2R 5320721 5321864 CTGGTCCAATCAGAGCTCC 59 5321910 5321929 CATGCGTCCTGAAGAAAGTC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0301766 3 3 5 95 2R 5362692 5363607 AAATGGACTTTGCCCTTTGG 59 5363665 5363740 CGGCTTCGTTCTTGATTCG 59 NA Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0088491,FBtr0289980 3 2 2 80 2R 5712628 5712713 GAAAGTGGAGATAAGTACAAGGAC 59 5712571 5712591 TGTTTCCATCAACGTCTTGTC 59 NA Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 2 1 1 130 2R 5733919 5733937 CGCACGACTGGAATTTCAG 59 5733751 5733769 CAGGAGGCGTACTAGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CAP FBgn0033504 FBtr0301131 2 1 17 89 2R 6183479 6183497 TTACAAGAGTCTCCAGGCA 58 6183550 6192144 AAGTGGATGTTCACGTCAC 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 2 10 17 82 2R 6182437 6182455 GTCATTCGTCTGTTTCCGA 57 6182824 6183261 CGATTGTTCTAGATTCCCGT 57 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 2 2 2 80 2R 6211561 6211642 GTATGGAGAACCAGATCTCCT 58 6211501 6211519 CGCCTAACATACATGGCAC 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 1 26 26 81 2R 6421122 6421141 CGAGGGCAAATTTCTCAAGG 59 6420996 6421083 GTACTGTTCTTGTAGTAAGGTAGC 58 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 2 5 5 106 2R 6624407 6624428 AAACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 2 4 4 80 2R 7097351 7097430 AGTTCAGAGTTGCCGAGTC 59 7097474 7097492 AGACAGTGTGGAAGGTGAG 59 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026 1 1 3 81 2R 7914456 7914474 GCTGCTTATTGCTGATCCC 59 7914335 7914411 CTATGATGTGAGGCTGGCT 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 3 6 6 155 2R 8548085 8548104 GAGAACAAGACCTACAGCTG 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018 2 1 8 127 2R 8560835 8561719 GATAATCAGCCATCGCGAG 58 8560726 8560745 GAATTCCGGTGGTCTTTAGC 59 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 3 2 2 99 2R 8574557 8574576 AACGGAAATAATGTCGAGGA 57 8575155 8575173 CTGAGGTATCTGCCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299755,FBtr0299761,FBtr0299762,FBtr0299754,FBtr0299763 2 5 12 83 2R 9303457 9306505 GAACCGCGATCTTCATTCAC 59 9303393 9303411 ATCCGTTTCGACTCTCGTG 59 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 3 4 4 84 2R 10126046 10126143 GGTTCACAGGGATCTAAAGC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 2 2 2 80 2R 10498983 10499136 AAGTTAAACCAGCTCGACG 58 10498921 10498940 CTTCTGACTCCGTCTTTGAG 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 3 4 6 81 2R 11172468 11178449 GACCAATTGGGTGTTTCACC 59 11172406 11172427 GCATGGTATGAATTTGATGCAC 59 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352 1 1 2 80 2R 11455696 11455714 GGCCAACATGGGAATAACC 58 11455208 11455342 CTCAGGTAGCCCTTTGAGTC 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 1 5 7 80 2R 11555162 11555180 AGCTGATTCTACCCATTGC 57 11553477 11555118 GCAGATAGGCATCGAACTC 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 3 3 3 104 2R 11587253 11587274 CCTTATATCGAAAGATCTCGCA 58 11587101 11587119 GACAGAGACTGGACTCGAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0301868,FBtr0100601,FBtr0301867 1 3 4 85 2R 12302866 12302884 AATGTGGCCTTCAATGTGG 58 12302716 12302734 ATATCATCGGGCTTTGGGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 1 2 2 80 2R 12544694 12544784 TCGGGATATTCCTATTGATGAC 57 12544635 12544653 AAGGACGACAAGATGTAGC 57 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 3 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Sply FBgn0010591 FBtr0087008,FBtr0087007 3 2 2 116 2R 12976598 12976616 GCTACTTCAGTGATTGCCC 58 12976441 12976518 CAGGTGGATACCAGATGGA 58 NA Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0113091 1 2 4 127 2R 13755953 13755972 CTTCAAGATGTTGCCATCGT 59 13755585 13755802 TGCACTTATCTCCCACTTCG 59 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 3 8 8 96 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032542 14032560 AATCATCGGATACAGACGC 57 NA Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0099994 2 1 2 83 2R 14073200 14073221 AGTGCTACGATGTCTATAAGGT 58 14072972 14073156 GCTTGTTCCCGTTCTTCAC 59 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 3 6 6 131 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175122 14175141 CAATATTCCACTCGTCCTCG 58 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 slim FBgn0261477 FBtr0086692,FBtr0086693 2 2 2 158 2R 14329808 14331168 ACGTGTTGATTTCTCATGGC 59 14331289 14331307 CTATTCCCGGTCCGTACTG 59 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 1 4 4 80 2R 14350182 14350257 GGACACAAGTCGAAGATCC 58 14350120 14350138 CGCTCGTGTATCATCACAG 58 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 2 4 4 80 2R 14363666 14363686 AGGCTATGTTGGTTAAGTGGT 59 14363164 14363627 CGTTCATAAGGCGATAATCCTG 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0086657,FBtr0086658 3 2 4 106 2R 14529037 14529058 TTATACAGGAGAATCAGTTCCC 57 14528687 14528971 TCAATCTTGTATCAGCACCC 57 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 1 2 2 80 2R 14745200 14745219 TGAAGGAACCTTATCGGGAG 58 14744890 14745162 CGATTAGATCCTCAATAACCTCTG 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 2 2 3 87 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911806 14911824 GAGGCTATCAGATGGTGCT 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 3 5 6 82 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290311 1 1 12 120 2R 15061862 15062396 GCATTTAAGTTTGGCCAGC 58 15062480 15062498 GACTGTTATATCCGCCCGA 59 NA Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 2 1 1 79 2R 15137554 15137572 TCTGCTAATAGCCACCGTG 59 15137819 15137837 CGTCGACTTTGTAACGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 3 2 3 90 2R 15315978 15315997 TTCAACTTTCGATCCAAACG 57 15316047 15316760 CACATGATCATCATTCTCTTCC 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 3 4 19 85 2R 15370532 15370551 GATGCCCGATCAGATAATGC 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 2 11 19 82 2R 15360675 15360953 GAAACTTTGCGTGTTGGAC 58 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 2 1 1 60 2R 15586764 15586783 GCTCTAAGCGAACTAGTAGC 58 15586661 15586679 GAATTTGCTTGTAGGCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 1 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485964 16485984 TCTATATCCGCCGATATTTGG 57 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 1 3 4 80 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 3 2 2 67 2R 18299488 18299506 CCGGATAATCCTGAGGCAG 59 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG33143 FBgn0053143 FBtr0071859 3 1 2 91 2R 18516053 18516387 CTCGCACCAGTACAATCAC 58 18517089 18517107 CGTCAGTGAGATCTTGGGA 58 NA Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 2 1 1 69 2R 18535710 18535728 ACTAAACCGCATTGTGGGA 59 18535599 18535620 CGGCACATAGTAATTAAAGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273314 3 4 5 97 2R 18598353 18598371 GAGTCATGCTACGTGAGAG 57 18598432 18598490 TTGAGAGCACTATCGACCT 57 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 2 4 13 84 2R 18817768 18817786 CCTGTGAGTGGTCTCAGTC 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 1 1 1 153 2R 18841030 18841048 GAAATCTTGACGGTAGCGA 57 18839534 18839552 GTCTTTCAGGTAGCTCCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Art7 FBgn0034817 FBtr0114564 3 1 1 133 2R 18964887 18964905 ATCTGCACAAGATTCGAGC 58 18964706 18964724 ACAGGGATATTCCCACAGG 58 NA DesignNoJunction Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 2 2 2 90 2R 19437533 19437551 CGACATCAGAAGAAGCGTC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 3 2 2 83 2R 19701897 19701915 TCAAGGTGGTGATCTTTGC 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072143,FBtr0301411 1 2 4 116 2R 19833770 19833964 AATACCAAACGCCAATCGA 57 19834124 19834142 CGCTAGCGGTAGATATACG 57 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301273,FBtr0301274 3 2 2 60 2R 20046512 20046531 AAGTCCGTAATGCCTTTGTC 58 20046418 20046437 GCATTGCTCTTAACATCTGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 3 3 6 123 2R 20281909 20281928 GTTAAGCCAGGACATAGTCG 58 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299700 3 1 3 85 2R 20304113 20304211 AAGCCCAAGTTACGTAGTACC 59 20304048 20304066 GAATTTACGCTGAGCACGG 59 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 1 2 3 81 2R 20484230 20484301 AGGAGAAGACTCTGGACGA 59 20484346 20484364 ATAAGGATCAATCCGGCGA 58 NA Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 1 2 2 96 2R 20579775 20579855 GAATTCGCAAGTGGTCACC 59 20579697 20579715 ATTGTACTTGCCCGGATCC 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 2 2 3 80 2R 20766556 20766575 ACATAGTGGCCCTAATAGCG 59 20766614 20766697 GATTATGGAACCAAGTTACTCCG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179 2 1 3 136 2R 20960904 20960923 ATACCCGAACGATCTCAGAG 58 20960724 20960805 GCACTAAGAAGTTGCTGCT 58 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 2 2 3 81 3L 147874 147949 GTATATGAAGCTTACTAGCTTGCG 59 147989 148007 GGTTGTGGCCATGAAACAG 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 2 2 6 82 3L 161362 167487 CATCAAATCGAAACTTTACGCC 59 167529 167548 TATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0301889,FBtr0072474 3 2 6 82 3L 161364 167487 TCAAATCGAAACTTTACGCC 57 167530 167550 AATATCACCCTTCTTGAAGGG 57 NA Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 3 2 2 80 3L 203609 205379 GGGAAGGTTGAGGAAATAATCAC 59 203551 203569 TTGGCCGGAGTTTCTATCC 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 1 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301348,FBtr0072521,FBtr0072522 1 3 5 100 3L 235504 235586 TTTAAACGGACAGAGGTGC 58 235422 235440 TATGGAGTACGGCAAATGC 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 1 10 10 80 3L 302288 302365 GCCATTTGTGATGGTTACCT 58 302405 302426 GGAGAAGATAAGCCGAATACTG 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 3 6 6 80 3L 998727 998837 GACATCGTCTGGATCTGAG 57 998665 998685 TGATCTCCTTGATGAGTAGCT 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 1 3 3 81 3L 1255033 1255494 AAGGGTATCGAGGTTTGCT 58 1255539 1255557 ACTTGGCCTTACTTCCCAG 59 NA Nonspecific Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 1 4 4 80 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 3 4 4 81 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326126 1326210 CAATGTAGGTATAGATCAGGTCCT 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0302310 2 1 5 60 3L 1635219 1635237 ATGATGATCATCATGGGCG 57 1633798 1635198 CGTCTTTCTTTGCAATAATGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292 2 1 2 129 3L 1757190 1757326 AAACAACCACAGAGGACGA 59 1757417 1757437 TCCTGATCGTAGTTCCAAGTG 59 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072849 1 1 2 80 3L 2046155 2046291 GTATTTGAACGTCCTGGACC 58 2046094 2046112 GTCAGGAGTATGAATCGGC 57 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072910,FBtr0072909 2 2 2 81 3L 2236099 2236121 CAGGAAATATCCGAGATTAGCTG 59 2235963 2236058 CTTCGTTCACCTGTATGGC 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302676,FBtr0302684,FBtr0302677,FBtr0302674,FBtr0302683,FBtr0302680 3 7 12 133 3L 2461261 2463067 GGAATTCGAACCCTCATCC 58 2463164 2463182 TCCTTGAATAGCTGCTGGT 58 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072963 2 1 4 88 3L 2500450 2501077 GAAGACACGTATCCCTATGAG 57 2500382 2500400 CAGATGATGCCGATCTTGG 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 1 4 5 116 3L 2604269 2607701 AACCATCAGAAACAACGTGG 59 2604172 2604190 GAGAAGAGCATGTCCAGGG 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072989,FBtr0072986,FBtr0072988,FBtr0072987 3 4 4 72 3L 3054201 3054220 TTCCAGATACGAACGATGTG 57 3054321 3054339 GACCGATAATCGTTCACCG 58 NA DesignNoJunction Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0302301 3 1 6 81 3L 3221971 3222855 GTGTAGAGACGTGAGATGG 57 3221908 3221926 GCTTCTTCAACAAGAAGGC 57 NA InUTR Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 3 5 5 67 3L 3300763 3300781 GTAGTACCACCGATCTGGA 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 1 2 2 153 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324492 3324510 GGGTCGGTAGTACTGAGAG 58 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073066 3 1 3 189 3L 3326705 3327870 CCATGCAAATCGACATGTC 57 3328022 3328041 TTTAGATCCGTCAGCTTCTC 57 NA Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 1 1 1 157 3L 4292634 4292652 TAAACTCATGCAGAGCTGC 58 4292860 4292879 GGACGTCTTAATCTTGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982,FBtr0289983 2 2 2 80 3L 4861669 4861747 GGAGAAGATATCTCACATGCAG 58 4861788 4861806 TCCAAATCGTATCGGTGGA 58 NA Drosophila melanogaster 61 CG17150 FBgn0035581 FBtr0289982 1 1 2 80 3L 4893077 4893097 GATCGTCGCTTGATACTTTCC 59 4893134 4893213 TTGAGATAGGGCATAGTTATCCTC 59 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 3 3 3 80 3L 5753885 5753963 AGAAATCACTTTGGACCAGGA 59 5754002 5754023 TAGCTCAGTTTGTCTATTGGGA 59 NA Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 1 2 2 80 3L 7113838 7113926 ATGCGAAACCAAGAATATCCC 58 7113968 7113986 TTTGCTTCTCATCGCTCTC 58 NA Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 3 2 2 118 3L 7113843 7113931 AAACCAAGAATATCCCGTGAG 58 7114011 7114029 CTATTGGCGTTGACCAGAC 58 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 1 2 2 80 3L 7750857 7750941 CTGTAATGATATCGACGAGTGC 59 7750979 7751000 CATATGAATTCACCAGGAAGGT 58 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 3 3 15 122 3L 7689773 7689791 CAACTACAGAGTCGACCCT 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 2 3 15 122 3L 7689772 7689791 CAACTACAGAGTCGACCCTC 59 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499 1 1 7 158 3L 7809700 7810544 CGAGTCAAATGAGCTCAAGG 59 7809490 7809510 ACCTCCTGATGTAATGTTGCA 59 NA Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 1 1 1 121 3L 8185522 8185541 TTCGATTCGGATAAGACGAC 57 8185333 8185351 AAGTAGCGCAGCTCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 2 3 9 137 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350939 8350957 AAATGATGCGGGTCATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 1 3 13 80 3L 8628115 8628133 AATTCAACTCGCCCATTGG 58 8628175 8631270 GCTGATACTGGTTTGGAACTG 59 NA Drosophila melanogaster 61 Fhos FBgn0261259 FBtr0302087,FBtr0302584,FBtr0302085,FBtr0302086,FBtr0302583 2 5 5 80 3L 8780759 8780777 GGTCTGATTTCGAAAGCCA 58 8780818 8782057 CTGATCGACACTAGAAGATCTG 58 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 2 2 4 180 3L 9707709 9708848 ATTTGTGCGAAGAAGCAGTG 59 9708990 9709009 GTCTTCTCAGTCGATGTGGT 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 1 3 8 183 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824111 ATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 3 4 4 127 3L 9893172 9893260 AGTACCACAAAGAGTGGACAG 59 9893343 9893367 GGCTGTGAGATCTTTGATTATACTC 59 NA Drosophila melanogaster 61 dpr10 FBgn0052057 FBtr0076310,FBtr0076308,FBtr0076309 2 3 3 102 3L 10143593 10144085 TCAGGATAAGGTGCTCAGC 59 10143509 10143527 ATCCGCATCGTAAATGAGC 58 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 3 3 3 185 3L 10687816 10688134 TTATATTCCAGATTGCTGTGGG 58 10687652 10687672 GTAAAGCAGGCACAGTATCTC 58 NA Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 1 2 2 114 3L 10877752 10877844 AATGAAGGAGTCCTGGGAC 58 10877656 10877674 CTTGTACGTCTTGACCAGC 58 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 2 4 5 126 3L 11109614 11109778 CACCAACTGGTACAATAAGCG 59 11109442 11109461 GGAGTCTGGAACAGATCCTG 59 NA Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 2 1 2 87 3L 11246021 11246039 ATCATCTACGGTAGCCTGC 59 11246832 11246850 TCAGGTCCAGAGTGTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300726,FBtr0300097 1 2 3 80 3L 11684343 11684425 GAGCAGCAATATAAATAGTGTCCTC 59 11684287 11684306 CCATTGTGAGAAGATTGGGC 59 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 2 2 3 173 3L 11730333 11730352 GAAACATCTGCACTACCACG 59 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113165,FBtr0113166 3 2 3 174 3L 11730334 11730353 CGAAACATCTGCACTACCAC 59 11730120 11730197 ATGTTCGTCTGGCAAATGG 58 NA Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070 3 1 2 97 3L 11883617 11883635 CAGCATAAATGTCCTGCGG 59 11881956 11883556 TAATCTCCGCGACACTTCC 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075923 3 1 2 74 3L 12774582 12774602 TTTAAGGAGGTGCATAAGCTG 58 12774695 12774713 GAACAAGATCGCTCACAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942 1 1 3 93 3L 12820675 12824993 CCACACCACATGATCAGGA 59 12820600 12820618 AATGCGGCCACATATTGTG 59 NA Drosophila melanogaster 61 CG10743 FBgn0036376 FBtr0075814,FBtr0075813 3 2 2 82 3L 13507889 13507968 AGGACAATTGCCGAAAGTG 58 13508014 13508032 TAGCTCTCGTTCGATGTCG 59 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075789,FBtr0075788 1 2 2 85 3L 13975943 13976212 GCGATACAGGAATACCGCT 59 13975876 13975894 GTAGGAGCCAATCGATCCC 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422 2 1 7 104 3L 14503010 14504014 CTAACAAACGGAAACCTTGTC 57 14502926 14502947 GTCAGCAATCTTATCATCAGTC 57 NA Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0075695 1 1 2 80 3L 14871664 14871988 GAGGGTTAACATATGCTATCCTC 58 14872028 14872046 CGCAGTTCGATCTCATCAC 58 NA Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299849,FBtr0299848 2 2 2 86 3L 15009706 15009932 CCATCGAGATCTATGTGGTG 57 15009639 15009657 ATCCAGTTCCACTTTCCTG 57 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 3 2 2 80 3L 15060073 15060617 CAATTACTCAGCAGAGAAGTCC 58 15060014 15060032 GATTTGAGTTGGGTCCAGG 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 1 4 4 80 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593966 15594346 CAAAGAATGTTGCAATGCGT 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 3 4 4 88 3L 15593708 15593797 CAAGTTCAAGGTCTCTACGA 57 15593848 15593866 AGTACTCATAGTTGTCGCG 57 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075541 3 1 3 121 3L 15805987 15806353 GGCAAGAAAGCTTCTCGAG 58 15805884 15805904 TCTTCCATGAGTGTGATATGC 58 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 2 3 5 83 3L 16983964 16984118 GTGAGCACATTCGTAGATGAC 59 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 1 2 2 85 3L 18747722 18748242 GAAATTGTGCTTCGATTCTGG 58 18747593 18747611 CACGAATCATCGGTGAGAC 58 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 1 3 3 80 3L 19719797 19719815 TCACTGGCGATCTCAAGAC 59 19719595 19719756 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 2 2 2 81 3L 19904554 19904574 AGATAAGCATACGCCAAACAG 58 19904616 19904689 GGTTTCAAGGGCTCATTTGG 59 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074833,FBtr0074835 2 3 4 104 3L 20253578 20253970 GATGAGAACGCTATCCGAG 57 20254038 20254056 GTTCTGGAAGATCTGCCAG 57 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078203 2 2 5 152 3L 20503868 20505044 ACAAGGCAGCAGTTAATTGC 59 20505157 20505177 TGAGGAGACGGACTTTATTGG 59 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078253 3 1 3 202 3L 20791865 20791888 CAGTTTATCTAGCCGAAAGTACAG 59 20792331 20792350 TATAGTTATCCTGCAGGGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114618 1 1 4 95 3L 20959293 20959314 CAACCATAGAAAGGGTACAGAG 58 20959154 20959242 CATTAGGAATCTTATCCAGCTCAC 59 NA Drosophila melanogaster 61 skd FBgn0003415 FBtr0078328,FBtr0112830,FBtr0078329 3 3 3 80 3L 20989471 20989492 TTCTAACATTCGAGGAAGAGGG 59 20989353 20989431 TGTCCATATGAGTGTCCCAG 58 NA Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 2 3 3 80 3L 21414616 21417562 TACATCAAGGTGGAGAGTGTC 59 21414556 21414574 CTGGACACGAATCTTGTGG 58 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669 1 1 2 85 3L 22671745 22671763 GAACTGATTGTGCTGCTGG 59 22671812 22672164 TTGATGTAATCTGGCGGCT 59 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0078536 2 1 2 112 3L 22727830 22728020 CTTCATGGAAACGTTCTGC 57 22727736 22727756 TTATTCTCGGGTAGAGTCTCC 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 3 4 4 116 3L 23560302 23561655 TACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 2 4 4 115 3L 23560303 23561655 ACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 1 2 2 80 3R 47701 47790 GTGTAAAGGCGGATCTCTG 58 47834 47852 TAGAAGATGCGCAGAACAC 58 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687 2 1 2 196 3R 67700 67721 CCCACTGTACATCCATATACGA 59 67411 67485 TTCCGTCAGTTCCACTTCC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0100499 3 1 21 216 3R 120627 120645 ATGATAACACGCTAGGCGA 59 120999 121299 TGATGTTGTACTTATCGCGA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 1 2 2 80 3R 190217 190297 GTTATATCATGCTTTGAGTCCG 57 190337 190356 CAGCTCCGTATTGAAATGGA 58 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 2 4 4 89 3R 293415 293433 TCTACTACATGATCGCCGC 59 293285 293365 CGAATTGAACCATTTGGAAGGT 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0273376 1 1 4 118 3R 536085 536624 CTACTACGTTGGTTGTCGC 58 536706 536724 TTCCATTGAGGCCATCTCC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 6 10 106 3R 570265 570283 TAAGCCAGAAGACGACCTC 58 569896 570198 TCAGTTGAGTATCCATATCGGT 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 2 18 19 87 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100030 1100464 GCACCAAATACGTTGTGCT 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 2 13 19 123 3R 1121453 1121472 GACGATGAAGACAAGAAGGC 59 1120564 1121367 CATCTTCCGAGGATCGGTC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078818 3 1 19 115 3R 1121451 1121469 GATGAAGACAAGAAGGCCG 58 1120593 1121374 AAACAATAGCGGTCTTTGCTC 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 2 3 3 80 3R 1392111 1392200 TTACCTTCTTCAAGTTGGAGAC 58 1392240 1392259 TTGGGTTCTTGTATAGCCAC 57 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 1 4 4 80 3R 1400703 1400973 GATCCTAAGGTATGCTGCGA 59 1401016 1401034 AATGCCGATCTCCTCAGAC 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 3 4 4 81 3R 1400704 1400973 ATCCTAAGGTATGCTGCGA 58 1401018 1401036 AGAATGCCGATCTCCTCAG 59 NA Drosophila melanogaster 61 Xe7 FBgn0010772 FBtr0078728,FBtr0302368 1 2 2 81 3R 1493659 1493739 TTCGAAGGATATGTTCAGTTCG 58 1493599 1493617 TTCGGACCAACTTATTGCC 58 NA Drosophila melanogaster 61 CG42675 FBgn0261561 FBtr0302724,FBtr0302726,FBtr0302727,FBtr0302725 1 4 4 133 3R 1643902 1643981 TCAACATGGACACAACGAC 58 1644078 1644096 TATCTTGCGTTTGGTGGTC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 1 4 4 83 3R 2212398 2212480 TGACGATGAGAACGCTCTG 59 2212526 2212545 CGATCAAAGGGATTGATGCG 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081673 1 1 3 187 3R 2313034 2315355 AAAGTCGGCCAAATTGGAC 59 2315948 2315966 TTAGCCTATCGCACTCGTC 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 3 1 2 60 3R 2569747 2569768 TTGTGGACAATTACTCAGTCAG 58 2569641 2569660 TCTACGTTTAACTCGACGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081747,FBtr0081748 3 2 2 60 3R 3636467 3636485 CAATTCGAAGGATGAGCCA 57 3636509 3636594 TACTTCAGACGAAGTGCCG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 2 3 3 138 3R 4499022 4499108 ATCACTACCAGCAAGGAGG 58 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 CG11980 FBgn0037652 FBtr0081962,FBtr0081963,FBtr0081964 2 3 3 101 3R 4830166 4830241 GTTGTCAGGCTAAGCAGTG 58 4830304 4830324 TTCCGGTGAGAGTTTAATTCC 58 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 3 2 5 103 3R 4858906 4858924 AGATCAAGAAGCGCTTTGG 58 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 2 5 5 230 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847652 4847670 CGATGGGATTCTCGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 3 3 5 153 3R 5044478 5057806 GGAATGCAGCGATTACCAC 59 5044343 5044361 GACCAGGTGTGATCCTTCC 59 NA Drosophila melanogaster 61 Aats-trp FBgn0010803 FBtr0081981,FBtr0081980 3 2 2 61 3R 5091840 5091861 TTAATAACCTGGAATTCGTGGG 58 5091742 5091762 CTGGATGCGAATGATGTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 3 14 14 84 3R 5271543 5271561 TTGTCCATCAATCTGGGCT 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 2 5 14 96 3R 5258550 5269739 ATTTCAGTTCCGGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 3 4 4 95 3R 5401288 5401372 TACTTCACTGATGAGGGCG 59 5401211 5401230 GTTCATCGTTAGCCTATCGG 58 NA Drosophila melanogaster 61 Dh FBgn0012344 FBtr0112870 1 1 2 102 3R 5466253 5469227 CTATACTCCAATGATGAAAGCCAC 59 5469288 5469306 TCCAACTGCTCCTCTTTGG 59 NA Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 3 2 2 164 3R 5566738 5566758 ATGACTCTGGTCTATCGACAG 58 5566940 5566958 TCTTCTTGCCATCTTGGGT 59 NA DesignNoJunction Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 1 4 4 80 3R 5592947 5592970 GAATCCCTTCTATGATCACATGTG 59 5592836 5592909 ATCATGTTGTGCAGATGCTC 59 NA Drosophila melanogaster 61 CG9471 FBgn0037749 FBtr0082160,FBtr0113211 3 2 2 84 3R 5597065 5597086 AACGCATTGCTATTATTGGAGG 59 5596947 5597020 AATTTCACCGACAGACCCT 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082196 1 1 6 80 3R 5930839 5930857 GGTGATTGGCAAGAATGGG 59 5930698 5930799 GGTATGTTCTGATCCTTGATTCG 59 NA Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183 1 1 2 100 3R 5990514 5990532 AGAATCATCCAGAGCCGTC 59 5989570 5990450 ATCATCGGCCATTTCATCG 58 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 1 4 4 85 3R 6525744 6525762 CTACGGAGATCGGTATCGA 57 6525808 6525952 CAGATCGTTTATCTTATCGAGC 57 NA Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 1 1 1 70 3R 7000884 7000908 GGATGTCACCTTTATACGAATATGG 59 7000607 7000625 CGATTCCAACGGATTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196 1 1 3 85 3R 7202925 7202945 GGCATGGCTCCTACTATATCC 59 7202992 7203740 GATTCGCAATGTTTGGCCA 59 NA Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 3 2 2 132 3R 7409665 7409685 GGCCTACTCGATATACAATCC 57 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0082526 2 2 6 80 3R 7629490 7629508 AGAGCATCGAGATCGATCC 58 7628404 7629451 GACCATACATATAGTAGAACGCCT 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 1 2 6 113 3R 7628402 7631764 CGATACTCTTATGTATGGTCGC 58 7628310 7628330 TTCCTTTGCTTATCTTCCTGC 58 NA Drosophila melanogaster 61 CG12201 FBgn0037970 FBtr0273272 3 1 2 81 3R 7797685 7797703 CATGGTTAAGACGCGACTG 59 7797744 7797821 CTAAGGCAATAGAGTTATGCTGG 59 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082604 1 1 2 129 3R 8218279 8218552 AAAGTGACCATTGCGAAGC 59 8218068 8218188 GATTACCGAATACCGGATCCT 59 NA Nonspecific Drosophila melanogaster 61 Octbeta3R FBgn0250910 FBtr0301944,FBtr0290335,FBtr0290334 1 3 4 82 3R 8338734 8338874 TCTTTCTGTGGTATGTCATCAC 58 8338673 8338692 GATCCAGAATAACACCACCA 57 NA Drosophila melanogaster 61 CG11600 FBgn0038068 FBtr0082646 2 1 1 67 3R 8462368 8462386 CGTGGTAAAGATTACCGCA 58 8462470 8462489 ACTGAGTAGCCGTACTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ravus FBgn0038128 FBtr0082779 1 1 1 83 3R 9089695 9089713 ACCTCCAGTTAACTCAGGA 57 9089570 9089588 GAGGATATTTCAGCAGGGC 58 NA DesignNoJunction Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 1 2 2 80 3R 9536989 9537007 CAAGTTGCTGATTCTCGGG 58 9536736 9536949 GCTTCACCAATGTCATAATAGGG 59 NA Nonspecific Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 3 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 1 3 5 80 3R 9582734 9582909 TATCCATGATGTGCAGAATCG 58 9582950 9582969 TTCAAGTAGTCCAAACGCTG 58 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 1 3 3 80 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610090 9610110 ATCATCGATCTGGACACTGAG 59 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 3 3 3 113 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451941 10452027 CTCAAGGAATACCTTTAGCACAC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 2 8 10 95 3R 11004068 11004088 CCTCTGGCTACAGATATCTGC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 3 2 2 93 3R 11249455 11249476 ACAGGTGAATGTCAAGTATGAG 58 11249257 11249401 GTCCAGGTTCTTCTCTGTG 57 NA Drosophila melanogaster 61 Gyc-89Db FBgn0038436 FBtr0083294 3 1 1 147 3R 12303247 12303267 TTCATGCGATTCATCTAGTGG 58 12304553 12304571 CTCTCGTACAGCATTCCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14898 FBgn0038437 FBtr0083308 3 1 1 64 3R 12307853 12307871 CAAGTGCAATCCCATGGAG 58 12307751 12307769 TGATTGTGGACGCATATCG 58 NA DesignNoJunction Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0300037 1 1 6 81 3R 12462267 12462285 TTTGAGTATCCGCGTGGAG 59 12462526 12462721 AATGATCACATAGCCAGTCCA 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 2 2 5 141 3R 12920462 12923770 AACACATCAAGCTGAAGTCAG 58 12920341 12920361 TTCTCCGTTGTATTTGACCAC 58 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290014 2 1 5 81 3R 12932052 12932070 AGCCACTAATAGTTCCGGT 58 12931523 12932007 TTCATGATCACACCATGCG 58 NA Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 1 2 2 80 3R 13216263 13216281 TATGAGCTTGGTCGTACCT 57 13202972 13216220 GATGTATAAACACGGGTCCA 57 NA Drosophila melanogaster 61 CG7156 FBgn0038588 FBtr0083606 1 1 2 80 3R 14065821 14065899 TGGGAGTTCCCTACAAAGTC 59 14065760 14065778 TCTCCAACGACTCACTAGG 58 NA Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 1 2 2 120 3R 14100856 14107428 GCAAGAAGGTGTGGATTAACC 59 14107510 14107528 TACGTCTTCAGGTTCCTGG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 1 4 7 96 3R 15593279 15593297 ATATCGCGGATCACCTTCC 59 15593354 15600650 CTTAGAAGGTCTCATCCTCCTC 59 NA Drosophila melanogaster 61 CG4662 FBgn0038735 FBtr0083813,FBtr0083814 1 2 3 99 3R 15676653 15676674 TGACAAGGACGAATTTCTAGTG 58 15676846 15677565 AATGCGCTCCATAATTCGC 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089485,FBtr0089487,FBtr0089484 2 3 5 89 3R 16365050 16365132 AAAGCGTCAAGATCCTGTG 58 16364979 16365001 GTTCCACTAGTAGATCCATTCTC 58 NA Drosophila melanogaster 61 H FBgn0001169 FBtr0083916,FBtr0083914,FBtr0083915,FBtr0083917 2 4 4 127 3R 16450496 16450514 CATCGATAGCGTACCAGCA 59 16450605 16450773 GTGGAGAAACTTTGTGCGT 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113255,FBtr0083959 2 2 8 87 3R 16628266 16631682 TTTACCAGTAGTCGGTAAACGT 59 16631730 16631748 TCCTATTAAACCGCTCGGG 59 NA Drosophila melanogaster 61 CG31191 FBgn0051191 FBtr0302412 2 1 2 88 3R 16757052 16757070 CAATCTGCGTTGTCATGCA 59 16756584 16757000 GTCTCAACCAAGTGTAGCG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 2 6 16 106 3R 17027955 17027973 ATCCAAGAGCTTGGATGTG 57 17028043 17028182 TGTGAGCACCTTCTTTGAC 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098 1 2 3 167 3R 17105827 17105845 GGAGGAGTTCGAGATCCTC 58 17105554 17105696 TTGTCGTAGTACCTGAGGC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 82 3R 17202595 17202614 ATTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 2 2 3 81 3R 18209068 18209140 TTATGCAACACGAATTTCCG 57 18209184 18209202 GCCTCTATCATCAGTTCCG 57 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607 1 1 2 90 3R 18833782 18833800 TCGTGACCCTGATGATGTG 59 18832390 18833728 TGATTAATGCCGTGCACAG 58 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 2 2 4 174 3R 19453174 19457217 AGAGCCAAAGCTATCGACC 59 19453018 19453036 ACGTCGATATCAGCAGTCG 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 3 4 4 88 3R 20172700 20172812 AGAACTACAACTCGACGGG 59 20172630 20172648 AGTCGAGCCATACTGTTGG 59 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084621 3 1 3 91 3R 20209176 20209259 GTATTTACACTGGATGAGCACG 59 20209106 20209125 CTCAATGGACAATGGCTGTG 59 NA Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0084699,FBtr0084700 3 2 3 93 3R 20646481 20646830 ACAGATGAAGATCATGGAGTC 57 20646883 20646903 CTTACGATCAGTAACGTCTCC 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 2 5 6 88 3R 21182007 21182025 CTTCATGTCTGTGCACACC 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113384,FBtr0113388,FBtr0113385,FBtr0084927 2 5 7 114 3R 21539670 21548145 GTTTACAGAATCAACTTGCAGC 58 21539577 21539595 CGATTCATCGCTTCCATCG 59 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 3 2 2 108 3R 22186366 22186386 CTATACCGCATCTCTGATGGA 59 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 2 3 3 80 3R 22686860 22686938 TGACAAGTTCATAAGGAATGCC 59 22686801 22686822 GTTGCAAAGTTGAACTGATAGG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 1 2 9 82 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699708 22699794 TAGCCCGTATATGCTACGG 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 3 2 9 85 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699705 22699793 TTGTAGCCCGTATATGCTACG 59 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 3 2 3 189 3R 22886861 22887131 ATACAATCCAACAAGGAGTGC 58 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085140 2 1 12 87 3R 22893138 22893157 ACAGTGGCAGACTATAAGGC 59 22892378 22893088 TGTCCGTCCTCTGTAAGTG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085146,FBtr0085143,FBtr0112834,FBtr0085139 1 4 12 82 3R 22892898 22892916 GGCCAAGGAGTATGAACGT 59 22892378 22892855 TGTCCGTCCTATTAAAGAGGAC 59 NA Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 1 2 2 80 3R 22984548 22984566 GGAGCTATGATATCCGAGC 57 22984667 22984742 CCGGATCTCATAAAGATCGT 57 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085308 1 1 3 160 3R 24501400 24515945 AGTGCCATTATTTCCACAGAC 58 24516067 24516085 TTCTTCTTTCCGTACGCCT 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 2 7 13 120 3R 24726634 24726652 AAATACCGCTACAGGGACG 59 24726736 24745223 GCTTTGCTGTCTTAGCCTG 59 NA Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 2 3 3 96 3R 24852819 24852839 CAAATGCTCTAAGCTTGACCA 59 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085375,FBtr0085377,FBtr0085374,FBtr0085381,FBtr0301651,FBtr0085380,FBtr0301650,FBtr0085376 2 9 10 185 3R 24957539 24957857 TTCCGAGATCTCAATCCCG 59 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 3 5 10 180 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24961001 24961025 CTGGAAGAAGATTATAAACACGGAC 60 NA Drosophila melanogaster 61 CG7802 FBgn0039704 FBtr0085486,FBtr0085485 2 2 2 80 3R 25650686 25650849 TAACGCCATTGGTCTTATCAC 58 25650891 25650909 TAGCAGTACGTCCAGATCG 58 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301745 1 1 2 139 3R 25662427 25662449 GATACCTCAACTTTATGACCGAG 58 25662548 25662622 CGTCGATGGTTTCTTGCTC 59 NA Drosophila melanogaster 61 CG15510 FBgn0039707 FBtr0301746 3 1 2 88 3R 25662480 25662499 CAGGACATGGTGCATTATGC 59 25662550 25662648 TACTGTGCTGGACTCTTGC 59 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 1 2 2 80 3R 25994097 25994175 ATATTACATCCATAGGACACCC 57 25994038 25994059 GGATTCCAGTGACCATATAGAG 57 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 1 3 4 87 3R 26032434 26033823 GAACACAAAGTCGACACCT 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653 1 1 2 80 3R 26316037 26316108 TCTACCGCAGGTATGTTGAG 59 26316151 26316169 GCCCGAGATAGTCATCCAG 59 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 3 2 4 127 3R 26742434 26749148 AAACTCAGAATTTGGGCCG 58 26749238 26749257 TTCGATATCGAGGATGTCGA 58 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 3 3 4 81 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006477 27006498 CAGATCACCAGGAAGATAATGC 59 NA Drosophila melanogaster 61 Map205 FBgn0002645 FBtr0085876 1 1 2 60 3R 27892051 27892070 CATCTCAAGCTCCTCTACAG 57 27887193 27887217 CATGAGTGTATAATAGAAGGGAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 3 6 7 83 4 470582 470875 TAAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 2 2 2 80 4 607706 608474 CAATTGGAGCCAAGTTTCTG 57 608515 608535 ATTGATCTTCGTCTCCTAGTG 57 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972 3 1 2 133 4 654362 654382 CAATGGAGGGCTTTATCACTG 59 654474 654555 CATGCCACCTTGTGTAATACAG 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 3 3 5 117 4 886473 886570 CACTTGGCAATAACCGCTC 59 886374 886394 TGGTATATCGGATGATAGGCC 58 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089245 2 1 3 85 4 902563 903595 GTTGATTAGGATGACATTCGGT 58 902499 902517 ATGTTCCCTCAACTGTTGC 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 2 6 6 100 4 974715 974733 AGAAATCCGGTGGTCACAG 59 974513 974653 TGCGAATGCAATTCTTGAGAG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089233,FBtr0089229 1 2 6 97 4 978508 978642 ATTAGTGCCAGGTACTCGA 57 978429 978447 GTCTGCAATTCAAGTCGTG 57 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 2 4 5 108 4 1036233 1037010 TAGATTTAGAGTGGAGAACAGGC 59 1036147 1036166 TAGTGCTGCAAAGTGTTGAG 58 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 2 4 8 85 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129794 1129812 CAATGTGTTCTTGCCCGAC 59 NA Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979 3 1 3 137 X 149333 149351 TATGATCCCTTGGAGGACC 57 149805 149824 CGTTAACTACACCGTTTCCA 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 3 4 8 169 X 165636 166463 GATGTTGATTACACCACGCA 59 165424 165442 GTTTGAATGGTAGCACCGC 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 2 2 4 62 X 227605 227625 GATCAGGAAGCTATCCATCAC 58 211927 211945 CATCACCATGTCGCTTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442 3 1 4 116 X 312536 364446 GAATCTCAGGTGGCAAGTC 58 211890 211910 ACTTTAGTACAGTGATTGGCG 58 NA InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070126 1 1 8 82 X 550512 551139 ATCATCGTAAGGAAAGCCC 57 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070135 2 1 3 244 X 653711 653798 GGGTTTCGTCTTGTCTCCA 59 654006 654024 CATTCGTGTTGTAGCTGGG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33082 FBgn0053082 FBtr0070174 1 1 1 84 X 925022 925040 CACCAAGGCTATCATGCAC 59 925147 925165 ATTCACTCCGGGAATCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070249 3 1 3 92 X 1120308 1127846 TTTACCTCGAGAGTCTGGT 57 1120234 1120252 ATCTGGTCAGCAGGTAGAG 58 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 3 2 2 85 X 1266048 1266132 GATTAAAGGTGTCGTATGCTCG 59 1266178 1266196 GTTGATGTTTCGCGACAGG 59 NA Drosophila melanogaster 61 SNF1A FBgn0023169 FBtr0070216,FBtr0070217,FBtr0070218 1 3 3 80 X 1270213 1270740 TGTACCAGGTCATATCGACG 59 1270781 1270801 CAATATAGTCGAACAGCTCCC 58 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 3 3 3 95 X 1365550 1365568 TTACCATCATCCGACTGCC 59 1365627 1365699 TGAACAGAGACGAGATGGC 59 NA InUTR Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0301843 1 1 6 80 X 1387284 1390134 GTGTGCTCCAATTCTAAGCA 58 1387223 1387243 TCGTTGTTCATCATGTACAGG 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454 2 1 2 60 X 1760125 1760143 CTGCAGGGATCTATCCTGG 59 1760167 1760232 GGTAGGCGGTTAGACTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428 1 1 2 138 X 2054276 2054428 GACACGATCTGCGAAACTG 59 2054156 2054174 TAAGGTCGAAGCGGTACAG 59 NA Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 3 2 2 153 X 2148116 2148135 CATTGGGCTACAACAATGGA 58 2147635 2148002 CTATTGGTTCGATCTTCTCGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 boi FBgn0040388 FBtr0070458 2 1 3 139 X 2341622 2341702 AATGTTCAGAATTCGAGCATGG 59 2341504 2341522 AACATGCGATACTGCACCT 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 1 3 3 106 X 2609222 2609240 GCTCTGTAACTCCTCCGAC 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0301122 1 1 5 83 X 4013010 4013028 AGGACGATCAGAATGTCGG 59 4013072 4014160 CCTTATGCGAACTTAAGATGCA 59 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670 3 2 5 84 X 4247574 4247592 GATCTGTTCGAACACGGAC 58 4247640 4247988 ATCTAGCCAGATCTTGGCT 57 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 3 4 4 153 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598371 GAGTGTTCACATAGTTGATGGC 59 NA Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 2 2 2 107 X 4793478 4797990 CACAATTGGCTATGGAAACG 57 4798060 4798078 GTACTGCTCAGGTAGACCA 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589 3 4 5 84 X 5123363 5123383 CTGGGATCATTCCTGAATCTG 58 5123429 5127484 GATCCAGCAGCTGTTTGAG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301952 3 1 7 92 X 5292786 5293575 CACATTCTAGAAGTGTTCCCT 57 5293625 5293647 GTGTTCTACTAGATATAGGTGGC 57 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 1 3 6 153 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 3 5 6 107 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 CG12541 FBgn0029930 FBtr0300759,FBtr0300760 2 2 2 95 X 6917121 6925879 TTTATGCCAAGGGTTACGC 58 6917044 6917064 TTGGCATCAAATAGTGACTGG 58 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0301675 1 1 3 153 X 7853123 7855223 CATTCACACCAATGGCCAC 59 7852493 7852514 TCCAAGATTATGCATCACATCG 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 3 2 6 93 X 8917821 8918118 GGATTCAGCCCTATACTGGA 58 8918296 8918315 CTTGTTCATGTAGTGCACGT 58 NA Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 1 1 1 80 X 9001229 9001247 TACTGCGTGGTAATCCTGG 59 9001358 9001376 GTTACGCGTAAACGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071297 1 2 6 106 X 9006200 9006218 TTTGATCACTGGCGTTACG 58 9006798 9007691 CCAAGTTCGGCACAATCTC 59 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 3 3 3 107 X 9048444 9048463 GATTTCAAGACCGATCTGCG 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 1 3 3 80 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148064 9148155 GTGAGCAGATCAGAGTCCA 58 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722 1 1 3 93 X 9575232 9575314 GCAAATGAATTTCCGTCCG 58 9575157 9575175 CTGAGGATTGTTACCACCG 58 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 2 2 2 111 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359181 10359199 CGTAGTTCTTGTGATGCGG 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 2 2 3 95 X 10640006 10640118 CTCACCTACAACGACTTTCTC 58 10640175 10640193 CAATGTCAGCGACTTGGTC 59 NA Drosophila melanogaster 61 Myo10A FBgn0030252 FBtr0273267,FBtr0273266 2 2 2 86 X 10855204 10855310 CTTCCGCAATGACCAACTG 59 10855360 10855378 TTGACCAGTTCCGCATAGG 59 NA Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 1 5 5 132 X 11029017 11029035 CAAGGACATGCTCATCGTG 59 11027710 11028925 GGCTGTGTATTTGTATACCATGG 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732 2 2 4 80 X 11329463 11329481 GCGAATCTGGATGATTCGG 58 11328833 11329419 TATTGGCGTGGGATACTCC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 2 5 7 80 X 12090590 12090609 CTGAAGTACGAGGAGAAGGG 59 12090647 12091232 GCTGAGAATATAATCCTTCTGCAG 59 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 2 3 3 82 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604678 12604697 CTATTGGTCATAGCTGACGT 57 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 3 2 3 81 X 13170569 13176207 CAATACACGATCTGCCATCAG 59 13170508 13170528 TTGAAGTCCAATGTCAGAGTG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 2 5 10 106 X 13493487 13494114 TGAAGAGTACACCAGCTCC 58 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 3 1 1 68 X 13650626 13650646 ACCCATATGTACCCTATTGCC 59 13650510 13650528 CTCCTCGCGTAAGTAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9095 FBgn0030617 FBtr0074026 1 1 2 197 X 15038449 15038467 ACAGTGTCAACATCCAGCA 59 15036018 15038288 GTGTGGTTCGGTTTCTTCG 59 NA Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074077 3 1 2 81 X 15353577 15353654 CCATATCTGGCAACGTTCC 58 15353514 15353536 GAAAGTCTAGTATGTAGTGCAGC 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 2 5 5 80 X 15749870 15749890 CTATAATCGCGTTGGAATGGA 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299535 3 1 3 136 X 15843842 15845190 TCTCAAGGCAGAAGCTGTC 59 15843724 15843743 GTATGATGTCCGAATGCGTG 59 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299949 1 1 3 88 X 15989712 15990567 ATTTAAAGACGACGGAGCAG 58 15989643 15989661 CTCACTTAAATTGGGCCCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 2 3 3 103 X 16532324 16532446 TCTTCTTGAAGAAGACTGGCA 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 3 3 3 104 X 16532323 16532445 GTCTTCTTGAAGAAGACTGGC 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302837 3 1 5 146 X 17614627 17614645 GGGAGAACTAACTCGCCTG 59 17615003 17615469 CAAACATCGCCTAGCTCCT 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0089800 2 2 6 60 X 17794817 17794838 CTGTTCAACATCTATCGCAAGG 59 17794859 17797996 GACCGATGCTATATGCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 3 2 6 80 X 17796055 17796077 CAAGTCGAGATCAATACGATAGC 59 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 1 1 7 81 X 18006014 18006034 GATACTGAAACTGGAGTCCGA 59 18000947 18005973 GGCATTGAGATCGTTGATCTC 59 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 1 3 6 161 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286879 18286898 TGTAGTCCATATCGAAGCCA 58 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 2 2 3 117 X 19157976 19163295 ACCTGCATTCCACTACCAC 59 19163376 19163394 CTTCTACTCGTCCTGTGCA 59 NA Drosophila melanogaster 61 pcm FBgn0020261 FBtr0302082 1 1 2 113 X 19380367 19380448 TTGAAATTAAGCAGCCGGC 59 19380204 19380222 GATGCTTCCTTCGGTTGAC 58 NA Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 3 2 2 144 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461955 19461974 ATTTCAACGTTGTCGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074771,FBtr0074772 1 2 4 80 X 19470777 19470797 TCCCTACTTTAACATGAACGC 58 19470418 19470735 CAGTCGTTCTTCGGAAGAG 58 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 2 3 3 114 X 19508312 19508330 GTTTCCTCTACTGCAACGG 58 19508408 19508485 ATGAATGCGTCAATGGTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 3 2 2 135 X 19729780 19729800 AAATCACTGCTGGTTGATGAG 59 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0077241 1 1 2 180 X 20907427 20907447 CTACCGACTCATTCATGACCT 59 20907657 20909783 TCGTCATCGCACTGTAGTC 59 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 1 5 5 80 X 21473852 21474021 ATCTATGGTCATGGAGCGC 59 21473790 21473808 CGACGTTTGAATGTCCACC 59 NA Drosophila melanogaster 61 snmRNA:430:CR33730 FBgn0053730 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33744 FBgn0053744 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K2:42Aa FBgn0011887 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-312 FBgn0067692 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-313 FBgn0067691 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:419 FBgn0065094 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31491 FBgn0051491 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31497 FBgn0051497 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31023 FBgn0051023 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:19F FBgn0011954 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi18S-1854b FBgn0083041 FBtr0113569 3 1 1 63 X 17039685 17039703 GATCCTTACAGGGTTGTGG 57 17039640 17039661 AAGAGGAATAGCTAATCATGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3436b FBgn0086602 FBtr0091803 2 1 1 114 X 6636487 6636505 AGGTGGTTATCCTCCATGG 58 6636391 6636409 AAGGTTCAGGTAGAGACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42491 FBgn0259993 FBtr0300454 2 1 2 131 X 657548 657566 CTAAGTACCCGCTAGTGGG 59 657228 657246 ACGCATAAAGCTCACTCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG12446 FBgn0031201 FBtr0077343 2 1 1 60 X 22212379 22212398 AACTTTCCGTTGAGCTACTG 58 22212338 22212356 ATGTTAAGGAGGGTGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14615 FBgn0031184 FBtr0077369 2 1 1 77 X 21850382 21850401 CCTGGATCTTTCAGAACGAC 58 21849929 21849947 CACCTAGTCCTCTACGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 1 1 1 98 X 21847817 21847900 AAGGTTCTCAAGGACACCA 58 21847961 21847980 GTCCATGTAAAGCCATAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0269 FBgn0029067 FBtr0077226 2 1 1 67 X 21192844 21192947 CTACTTCCTGGACGTGGTC 59 21192795 21192813 CGTAAATCTCCATGCTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1314 FBgn0031134 FBtr0077286 1 1 1 60 X 20739702 20739724 CTACCCAATATCTACAAGGACTG 58 20739664 20739683 TCTTCCACAGCATTATCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15450 FBgn0031132 FBtr0077280 2 1 1 81 X 20693244 20693262 ACAACATACAATCAGGCGG 58 20693304 20695331 GTTGAATTAACATGGCTAGCTG 58 NA InUTR Drosophila melanogaster 61 cactin FBgn0031114 FBtr0077305 3 1 1 60 X 20295707 20295725 ACTCCAATCTCACCTCCAC 58 20295746 20295767 TTTGATAGTCCCTCTACCTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx16 FBgn0031106 FBtr0077330 2 1 1 122 X 20264476 20264494 CCTTCTAAAGCACTCGGTG 58 20264310 20264391 GGCTTGATCTTAGACATGGT 57 NA Drosophila melanogaster 61 CG42582 FBgn0260872 FBtr0301571 2 1 1 81 X 20024912 20024931 TGTCCAATGTCTAATGTCCC 57 20024850 20024868 GCTAGTAGTGCACTTGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33932 FBgn0066303 FBtr0091936 3 1 1 68 X 19638705 19638796 AGACTTTAAGGCCCAGCAG 59 19638828 19638846 TGCAGAAAGATCTCGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12531 FBgn0031064 FBtr0074788 2 1 1 80 X 19617544 19617565 GTTCTAGTTTCGATTCCCTGAC 58 19617606 19617697 GTGGTTTGCCGAATATCGT 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074715 1 1 8 94 X 19390736 19390754 TCTGTATTCATCGGGTGCA 58 19390812 19400528 GTTCCTTCTGCGTTTACGA 58 NA InUTR Drosophila melanogaster 61 Her FBgn0030899 FBtr0074590 2 1 1 86 X 18099005 18099023 TTAAGGACCTGCTTCAGGA 57 18098809 18098827 GAACTGCCAATTCCAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074526,FBtr0074523 2 2 7 199 X 18007409 18007493 AGAAGAAACTCAGGTTGCTG 58 18004576 18004594 CTTATCGCCCTCCAAACTG 58 NA Drosophila melanogaster 61 CG7192 FBgn0030894 FBtr0074527,FBtr0074528 1 2 2 80 X 17992540 17992628 ACCAAGCTGTGAATGATATACC 58 17992481 17992502 GTTCCAGCTGAAAGTCATAGTC 59 NA Drosophila melanogaster 61 CG6506 FBgn0030874 FBtr0074465 3 1 1 75 X 17744826 17744844 GATGAAGCAAACCGAGGTG 59 17744880 17744961 CAAGAGGTAATTGGAACTTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8326 FBgn0030851 FBtr0074486 3 1 1 141 X 17523297 17523387 CAGAAGGAGAAGAAACTTTCCA 58 17523177 17523196 CAATTTCGCCCAATCTTAGC 57 NA Drosophila melanogaster 61 CG8661 FBgn0030837 FBtr0074444 1 1 1 64 X 17178494 17178513 CGACAGCATGAAGTATACCA 57 17178387 17178467 CCACCAATGCATTTACGCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG8664 FBgn0030836 FBtr0074445 1 1 1 123 X 17176703 17176721 AGTACTCAACGTCTGCCTC 59 17176360 17176378 GAGATCCTTAAGCTCGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG32564 FBgn0052564 FBtr0074390 3 1 1 60 X 17101660 17101678 TCCAATAGCGGCTTCTCAG 59 17101702 17101720 TCTCAAAGATACCGCCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 baz FBgn0000163 FBtr0074388,FBtr0111000 2 2 2 81 X 17085681 17085699 CGCAGATGCACTTAATGAC 57 17085744 17085829 GGTAGTGTTGGAGACATCG 57 NA Drosophila melanogaster 61 xmas-2 FBgn0028974 FBtr0074404 3 1 1 87 X 17051534 17051613 AGTATGAGTTGGTGGAAGTG 57 17051466 17051484 TTGAGGTAGAGGTCTCGTG 58 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 2 2 2 80 X 15782410 15782429 TTTAAGTGCCGTGGAAATGG 59 15782274 15782293 AATAGCTTACCAACCAGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17209 FBgn0030687 FBtr0300811 2 1 1 80 X 15662008 15662094 ATTGGATGTTCGGAACCAC 58 15662138 15662156 AGGTCGATACACTTCTCGT 57 NA Drosophila melanogaster 61 CG5548 FBgn0030605 FBtr0073960 3 1 1 177 X 14958009 14958092 CAATTTACGATGGGCAACG 57 14958233 14958251 AGTAGTCGCGGAATTCCAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG9030 FBgn0030599 FBtr0073971 3 1 1 82 X 14848370 14848388 ACAGGACTATAGGCAACGG 58 14847734 14848328 GGGTTTAGACATAGAAAGGACAC 58 NA Drosophila melanogaster 61 CG14410 FBgn0030583 FBtr0073948 2 1 1 60 X 14730909 14730929 TTGAGAATCTGGCAAACAACC 59 14730949 14730969 TTATCTGCAGTCTTTGCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 3 4 4 115 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641988 14642006 AAGTAGCAGGGATCGTTGG 59 NA InUTR Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 3 2 2 129 X 14127233 14127253 CTACCTCAAGGATAAGGACCC 59 14127060 14127145 GCTGTCCTTGAAGTCTAAATCG 59 NA Drosophila melanogaster 61 CG2691 FBgn0030504 FBtr0073848 1 1 1 80 X 13515697 13515717 CGATAAATCGAAATTGGTCGC 58 13515572 13515655 AGTTCGCGAAGTAGTTCGT 59 NA Drosophila melanogaster 61 Jafrac1 FBgn0040309 FBtr0073764 3 1 2 122 X 13224555 13225159 TCTGGAAGTCAAGGATGCC 59 13225245 13225263 AAAGCACCAGGTATTTGCC 58 NA InUTR Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202,FBtr0290203,FBtr0073733 1 3 3 60 X 13151943 13151961 CGTTCATCATGCATGACAG 57 13151901 13151919 TTGGTGAGCTCTTCAATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32642 FBgn0052642 FBtr0073713 3 1 1 152 X 12853442 12853460 TTGCGGATGTCAACTACGA 59 12853573 12853677 TTTGGATGAGTTCCTTCTTTCC 58 NA Drosophila melanogaster 61 CG15735 FBgn0030364 FBtr0073621 2 1 1 80 X 11913909 11913930 TCTAAGAATGCTGATGTCAGTC 58 11913971 11914054 GGAGACTTCATTGTACCCG 57 NA Drosophila melanogaster 61 CG15928 FBgn0040856 FBtr0301091 3 1 1 69 X 11878823 11878841 CAATATTGCCATCATCGGC 57 11878772 11878790 TTTGTTAGACCCTTGCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32662 FBgn0052662 FBtr0073564 3 1 1 60 X 11726182 11726203 TATACATTACCCTGGATACGCT 58 11726219 11726242 GATGAGTTATTCGATGTAGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inaF-A FBgn0085351 FBtr0112524 3 1 1 147 X 11627704 11627723 ATTCATCTCAAGTTTCCCGT 57 11621344 11621362 CTTCCGATGAGTTCAGGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 inaF-B FBgn0259918 FBtr0300200 1 1 1 138 X 11626502 11626522 CTACTACCTGTTCATCTGGGA 58 11621394 11626403 TTATCCAATTCCGGTCACTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15220 FBgn0030322 FBtr0073535 3 1 1 133 X 11509654 11509672 CCAGTTCCACAGACAACCA 59 11509468 11509558 AAACTCGATGACCTCCTTGG 59 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073454,FBtr0073455 1 2 2 60 X 11251124 11251147 GTCCCTAAATATCATTACCGTCTC 58 11251164 11251184 GGATATGCCCAGAAAGTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rpt3 FBgn0028686 FBtr0073436 3 1 1 129 X 11019345 11019363 AATGCCGTACAACATGGAC 58 11019529 11019606 TTGCAGTTTCTTGTAACGCA 59 NA InUTR Drosophila melanogaster 61 CG1582 FBgn0030246 FBtr0073403 3 1 1 83 X 10790891 10790976 GATACGCGGAATATAGCAAGC 59 10790828 10790847 CGGATTCGATCAGTTCTGGA 59 NA Drosophila melanogaster 61 Ant2 FBgn0025111 FBtr0073426,FBtr0073425 1 2 2 81 X 10674283 10674301 AACTTGGCCAACGTAATCC 58 10674144 10674241 CGAGGAATACCGATTTGTACAC 59 NA Drosophila melanogaster 61 Atg8a FBgn0052672 FBtr0071498 2 1 1 60 X 10659669 10659688 GTGAACAACGTCATTCCACC 59 10659559 10659646 CGTGATGTTCCTGGTACAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1628 FBgn0030218 FBtr0071510 3 1 1 105 X 10493300 10493318 TTCTATCGCGGATTGAGCT 59 10492957 10493231 ATTGATCATCCCTGCGGAG 59 NA Drosophila melanogaster 61 CG2990 FBgn0030170 FBtr0112971 1 1 2 95 X 9905139 9905219 GAAACTCTATGGTCATTGGCA 58 9905276 9905294 GGAGGGCAGATTGAATGTG 58 NA Drosophila melanogaster 61 CG1791 FBgn0030163 FBtr0112968,FBtr0071429 1 2 2 95 X 9857824 9857844 ATTCGATCAGGATAACGACGA 59 9857689 9857767 AACAAGTTGCTCTCGAAGC 58 NA Drosophila melanogaster 61 Idgf4 FBgn0026415 FBtr0071394,FBtr0071393 2 2 2 184 X 9823081 9823213 ACTCTTCGCTGTTCTTCGA 59 9822915 9822933 TCCGGTCCAGTATTTCACC 59 NA Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302153 3 1 2 80 X 9259961 9259979 GGATCTACATCTGCGATGG 57 9259825 9259917 ACTTACGGTCATTGCACTG 58 NA Drosophila melanogaster 61 CG9034 FBgn0040931 FBtr0071343 2 1 1 146 X 9053866 9053942 TTGTGTACCAAGATGTCCG 57 9053738 9053756 ATAGTAGTTGGCCACTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 3 2 2 80 X 8977445 8977463 CAGGCCTCATTTACGAGGA 59 8977504 8977583 TGTAAGTTCCTAGGTTCTCCTG 59 NA Drosophila melanogaster 61 e(r) FBgn0011586 FBtr0071266 2 1 2 80 X 8799585 8799603 CAACTTCGAGAGTCTCGGA 58 8799403 8799541 GTGCGACATGGTGATATCC 58 NA InUTR Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 3 3 3 88 X 8488872 8488955 GTACCTTCATCGAATGGTTCTG 59 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0071242 1 1 2 80 X 8353363 8354811 TACATCAGTTGTGATGGATGC 58 8353303 8353321 ATTGAGCAGGCTCAATGGA 59 NA Drosophila melanogaster 61 org-1 FBgn0021767 FBtr0071244 1 1 1 81 X 8345438 8345456 GATGAAGCAGATCGTGTCC 58 8345278 8345396 GGAGTTCAGAATGATATGTCCA 57 NA Drosophila melanogaster 61 CG10959 FBgn0030010 FBtr0071157 3 1 1 81 X 8043455 8043473 TCCGCAAGACTATCAACCG 59 8043585 8043604 GTTGTAGTCCTTTGGTTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15335 FBgn0030001 FBtr0071193 1 1 1 96 X 8021163 8021181 ACATCCTTAGCTCGGTGAG 58 8021003 8021104 CTGGCATTTCTATCGTGACC 58 NA Drosophila melanogaster 61 CG2233 FBgn0029990 FBtr0071123 1 1 1 80 X 7930805 7930826 GGACAACTTAACGATATCGGAC 59 7930655 7930765 AAGTTCACTCTTGCTGATGG 58 NA Drosophila melanogaster 61 RpS14b FBgn0004404 FBtr0071096 3 1 1 126 X 7829360 7829378 TCCATGTCACGGATCTGTC 59 7829468 7829545 TTCTCAGCCACATCCTGAG 59 NA Nonspecific Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 3 2 2 80 X 6868808 6868826 CGTGTTCATCTGGTTCTGG 58 6868668 6868766 ATAAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0070990 3 1 2 85 X 6572630 6572648 AGACGCAAACTTCCAATGG 58 6572221 6572582 CAACGGTCTGCATTATTGCA 59 NA InUTR Drosophila melanogaster 61 CG3918 FBgn0029873 FBtr0070912 2 1 1 108 X 6418745 6418763 TCAACAAGGATACGTTGCG 58 6418906 6418924 AGCAGGATCTCCTTGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42240 FBgn0250869 FBtr0290308 2 1 1 61 X 6225562 6225582 CGAAGTTTCATTTGCGTTTGG 59 6225605 6225623 CTTACCGCTATCCTTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wuho FBgn0029857 FBtr0070897 1 1 1 60 X 6182737 6182757 GCCATTTAAGTGTGGTATACG 57 6182778 6182797 CAGGTGATGATATGCTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Top3beta FBgn0026015 FBtr0070930 1 1 1 92 X 6179391 6179475 AGTACATACAGACCAAACCGG 59 6179319 6179337 ACTCGCGATACACCTTCAC 59 NA Drosophila melanogaster 61 Spt6 FBgn0028982 FBtr0070896 2 1 1 81 X 6163429 6163448 TCATTGTGGACGATAATGGG 57 6163492 6163575 TCTTGAAGTGATGCGTCTG 57 NA Drosophila melanogaster 61 CG11462 FBgn0029815 FBtr0070831 2 1 1 130 X 5734698 5734716 CGTTGCTCTCAGAAGTACC 58 5734586 5734604 GAAAGGCGAACCCAAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cv FBgn0000394 FBtr0070804 1 1 1 87 X 5586335 5586420 AGTACGAGATGGTTCCACG 59 5586471 5586489 ACTTTCTACAGCGGCTCTC 59 NA Drosophila melanogaster 61 l(1)G0045 FBgn0026702 FBtr0070782 3 1 1 96 X 5518432 5518519 CATTAGCGGGAGTTCAAAGAG 59 5518575 5518595 AACTTTCGGTAATTGGTACGC 59 NA Drosophila melanogaster 61 dhd FBgn0011761 FBtr0070749 3 1 1 63 X 5206509 5206529 CCATGAACGACTATCACAAGC 59 5206552 5206572 TAGAAATCCAGCACGATTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112948 3 1 5 111 X 4824088 4832015 CAACCAAGCACAAATGCAG 58 4823995 4824013 CTAGTGTTATTTGTGCGCG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 peb FBgn0003053 FBtr0100265,FBtr0070680 1 2 2 83 X 4514884 4515193 TTGCTCCAAGGTGCTATCC 59 4515240 4515258 TAGCGGCAGTTAAAGGGAC 59 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 3 2 2 260 X 3685572 3685591 TATCAAGAAGATTGTGCCCG 58 3685814 3685832 TCTTCTTCACCGCACTCTG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 AlstR FBgn0028961 FBtr0070575 1 1 1 85 X 3539719 3539738 CGTATCCACAATAGTTCCCG 58 3539785 3549622 CCACAACCACCAGAATAACC 58 NA Drosophila melanogaster 61 CG14418 FBgn0040354 FBtr0070565 1 1 1 224 X 2777621 2777639 ATCCTGGTCCTGATTTGGG 59 2777331 2777349 TTTGGTGATGAAACCGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 per FBgn0003068 FBtr0070477 3 1 1 165 X 2583465 2583547 CTACAAGGTTCCCGACGAG 59 2583676 2583694 CTCGTGGTGGTAGAAGTCC 59 NA Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0302449 3 1 4 106 X 2476597 2477033 CAGACGAACTGAATCTTCTTTACC 59 2477098 2477116 ATCACCTGTTCACTGTGCT 59 NA InUTR Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 1 2 2 91 X 2268795 2268813 TATCTACTCCACGTCGGAG 57 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 CG3078 FBgn0023524 FBtr0070415 3 1 1 156 X 2152484 2152502 CAGTCTGCCGAATCTTCAC 58 2152285 2152366 ATTATACGACGATTGCTTGCG 59 NA Drosophila melanogaster 61 Or2a FBgn0023523 FBtr0070397 3 1 1 136 X 2141283 2141302 CAACTGGATAGAACAGCTGC 59 2141401 2141489 TGAACCTCATGACCTGCTC 59 NA Drosophila melanogaster 61 CG4281 FBgn0025626 FBtr0070339 1 1 1 80 X 1958633 1958651 ACTGACCTTGCCTATACGC 59 1958513 1958591 TTGTAGAATCTGGCTGGACTG 59 NA Drosophila melanogaster 61 mip130 FBgn0023509 FBtr0070315 2 1 1 81 X 1802377 1811017 CTGTACCCTATGCTTACCGG 59 1811061 1811079 AAGCTCCTGCCTTCTTACC 59 NA InUTR Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0070356 1 1 2 138 X 1795298 1795477 CAGGTCATGGCTTCAAATCTG 59 1795180 1795198 TACAAGACCACCAGCTAGC 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089990,FBtr0089989,FBtr0089991 3 5 5 97 X 1790781 1793025 CAGAATCGAACCATGTCGC 59 1790702 1790721 GAATTCTGCTGCCACATGAG 59 NA Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070367 2 1 2 83 X 1762738 1762830 CCGATAAACAGTTACGTAGCA 58 1762675 1762693 GATTAACTCCACCGCAGTC 58 NA Drosophila melanogaster 61 CG14797 FBgn0029587 FBtr0273400 3 1 1 88 X 1577782 1577868 CTACATGCAGTGTGACCAG 58 1577919 1577938 GGACTTCTTTAACAGCAGCA 58 NA Nonspecific Drosophila melanogaster 61 CG18823 FBgn0042146 FBtr0070171 1 1 1 60 X 884620 884638 TAGAAACGATATCCCGGCA 58 884662 884680 CGGTAGGTTTCTCACCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070124,FBtr0070127 3 2 8 63 X 550607 550625 TCCATCTGTGGTAGAGTCG 58 551146 551164 ATTGCAACTTGATGCTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41539 FBgn0085796 FBtr0114250 1 1 1 60 U 9757593 9757613 CTGAAGATTGAGATAGTCGGG 57 9757635 9757653 AGAACGAGCACATAAACCA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40597 FBgn0085754 FBtr0114204 1 1 1 82 U 9540989 9541010 ATATAGTAGTGTAAGCTCGCTG 57 9541053 9541071 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42424 FBgn0259855 FBtr0300152 2 1 1 60 U 7778851 7778874 GTAATTCTCCGAATATAGTCCTGG 58 7778814 7778833 TAGGGACTGCTAGTTAAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41562 FBgn0085693 FBtr0114142 2 1 1 63 U 5467357 5467375 GAAATCTTGGGCGAGTACG 58 5467401 5467493 GATGCTTACTTGACTGCGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42623 FBgn0261338 FBtr0302254 2 1 1 82 U 383637 383656 TTCCAACGTCGCATATACAC 58 383698 398749 CATGTATTTACAGAGTTCCCGA 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1295 FBgn0083055 FBtr0113584 3 1 1 60 3R 16648389 16648410 GCTAGATAAAGTGCCAGAATCG 59 16648431 16648449 TATTCCAGCTCTGCAGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-2 FBgn0084688 FBtr0113491 2 1 1 60 3R 12590014 12590032 TAACGGCAGAACCAAAGTG 58 12589972 12589990 ACGTCAGACTTGGAATAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CstF-50 FBgn0039867 FBtr0085865 3 1 1 84 3R 27561718 27561736 CATCAACACCATTGCCGAG 59 27561598 27561673 GGAAGATAGGAGGTACTTTCCA 58 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 2 5 5 82 3R 27426315 27426406 AGTACATGAGGATTCCTGATCG 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 CG11340 FBgn0039840 FBtr0085766 3 1 1 92 3R 27130060 27130731 ATCTTCAACAGAATCTGGCC 58 27129987 27130005 ATTGCGACAGGTTGATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG31005 FBgn0051005 FBtr0085769 2 1 1 80 3R 27068029 27068334 GACGATGTGCGATATCTGC 59 27067967 27067986 CTGGCCATCGAAGTAATAGC 58 NA Drosophila melanogaster 61 CG1542 FBgn0039828 FBtr0085757 2 1 1 115 3R 27039312 27039330 GGGATAACTCAGATGCCGA 59 27039471 27039547 CAGCAGTTTGGTCACATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34041 FBgn0054041 FBtr0302521 3 1 1 80 3R 26334887 26334953 CAATTGACGAAGCCCTTATCG 59 26334994 26335013 CTGGACTAGATGCTATGGCC 59 NA Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 3 2 2 145 3R 25004530 25006889 CAGAGTTCGATTATGCCAGTC 59 25004405 25004423 ATAGTGATTGGTGACGGGC 59 NA Drosophila melanogaster 61 CG11898 FBgn0039645 FBtr0273260 3 1 1 111 3R 24994939 24994957 ATTTGGCTCCTCATACCGG 59 24995027 24995104 GACTGCGAGATATAGTTTCTATGC 59 NA Drosophila melanogaster 61 CG11898 FBgn0039645 FBtr0273260 1 1 1 86 3R 24995034 24995107 AACTATATCTCGCAGTCCCA 58 24995156 24995174 TACTTGGTGCCATTCAGAG 57 NA Drosophila melanogaster 61 CG14512 FBgn0039639 FBtr0085413 1 1 1 60 3R 24963934 24963954 CAGAAACCTGGACTCATTGTG 59 24963894 24963915 CCAACTCCAGTTGATGATTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 3 1 1 74 3R 24943546 24943565 AATGCACCACTCATGAAGTC 58 24943602 24943682 GTCCTCTGACTCCGATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Slu7 FBgn0039626 FBtr0085418 2 1 1 86 3R 24863512 24863597 GAACAGTTCAAGTCAAGTACCA 58 24863447 24863465 CAATAGCGACTTTGGTGGA 57 NA Drosophila melanogaster 61 CG33346 FBgn0053346 FBtr0302527 3 1 1 90 3R 24495451 24495538 ACCAATTTAAAGTCAGATCGGC 59 24495583 24495607 TACTATTCATCTGAAAGGTAGCCTC 59 NA Drosophila melanogaster 61 Mst98Ca FBgn0002865 FBtr0085277 1 1 1 63 3R 24117296 24117314 GTATTCCACCTCCCTTCCC 59 24117341 24117359 TTCTTGCAGATCATGCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ets98B FBgn0005659 FBtr0085224 2 1 1 215 3R 23570244 23570323 ATATCGCAGGATCCCAATGG 59 23572160 23572179 GGCCATCTTCCAAATTTCCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG5984 FBgn0039500 FBtr0085181 2 1 1 241 3R 23072868 23072951 GTTCTTCAGTGCCCATCTC 58 23072645 23072663 GATGTAGTCACCGGGATCG 59 NA DesignRelaxed Drosophila melanogaster 61 dei FBgn0008649 FBtr0085009 2 1 1 192 3R 22267457 22273281 AGATGAAGTCCAATACGTACGA 59 22273434 22273452 AGTTGAAAGTCAGCCAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dak1 FBgn0028833 FBtr0299798 2 1 2 60 3R 21882130 21882149 TGGAGGATGAGGATGATGAC 58 21882029 21882110 ATGATTTCCAGAACCTTCTGAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG31091 FBgn0051091 FBtr0084941 3 1 1 91 3R 21727249 21727333 AAGAACTAATTCGACCGCC 58 21727388 21727406 GATGCTCCTGCATGTAGTG 58 NA Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113352 3 1 5 179 3R 21149862 21149880 GTAAGGGTGGCCACTAAGG 59 21149633 21149721 CACGTCCTTAAGAGCTTTGAC 59 NA Drosophila melanogaster 61 CG13659 FBgn0039319 FBtr0084828 1 1 1 80 3R 21127701 21127719 GGCTACCAAGGATCAATGC 58 21127757 21127841 CAGCAGTAGAAACTCGTAATATCTG 59 NA Drosophila melanogaster 61 CG11875 FBgn0039301 FBtr0084812 3 1 1 103 3R 21074246 21074264 ATGTCCGTCAAGAGTCACC 59 21074387 21074406 GAGATGACTGTCTGCTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13654 FBgn0039290 FBtr0084805 3 1 1 80 3R 21036521 21036600 ACCAAGGATCAGAGATTTAAGG 57 21036639 21036659 AGGTCCTTCAATGGTAATACG 57 NA Drosophila melanogaster 61 Cad96Ca FBgn0022800 FBtr0084874 1 1 1 81 3R 21027328 21027346 CTGTGAAGACGCTCAAGGA 59 21024684 21027287 TCCAGAGATTTCATTACCTCCAG 59 NA Drosophila melanogaster 61 fd96Cb FBgn0004898 FBtr0084771 3 1 1 60 3R 20920983 20921001 ATTCTACCGGAAGAACACG 57 20921025 20921043 GTTGAAGCTGAGATTGTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 2 3 3 61 3R 20877261 20878205 TACAATTGCCTGAGTCCGG 59 20878229 20878248 CGAAATCCCTTAAAGCTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Ppox FBgn0020018 FBtr0084664 2 1 1 60 3R 20486867 20486885 AGGAACAGAAGTACGGAGG 58 20486825 20486843 TTGTTCTTCTCAAAGCGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13615 FBgn0039199 FBtr0084617 1 1 1 80 3R 20217053 20217073 GATCAATGAGGCACAGAATCC 59 20217112 20217199 TTGGGCTGGTAATTAAACATGG 59 NA Drosophila melanogaster 61 CG13614 FBgn0039194 FBtr0084614,FBtr0084615 2 2 2 86 3R 20196180 20196198 GCCATCTGTGATAGCAAGC 59 20196244 20196327 GGTTGGTAGTGTAAACACAAGTC 59 NA Drosophila melanogaster 61 CG6356 FBgn0039178 FBtr0084601 2 1 1 80 3R 20112886 20112967 GAACTGCTACCTGATGAGTG 58 20113007 20113028 CTGAAGAGAATCTTGTAGACGC 59 NA Drosophila melanogaster 61 mbc FBgn0015513 FBtr0084459 3 1 1 80 3R 19620237 19620258 CCAACACTTTCTCAGTGTTCTC 59 19620296 19620387 ACATCCATCAATTTGGTGTAGG 58 NA Drosophila melanogaster 61 CG10225 FBgn0039110 FBtr0084468 3 1 1 126 3R 19578285 19578432 AATAATGAAGCGTCAGTCGA 57 19578178 19578196 TGGAACTATTGTTGGAGCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 1 1 1 141 3R 19237992 19238010 GTGGTACGAGAACCAACAG 58 19237738 19237887 AACTCGTAGCCCTGTAACG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir94e FBgn0259194 FBtr0299678 1 1 1 80 3R 19231637 19231658 ACGAACTGTTTAGGAATTGCTG 59 19231696 19231775 AAGTCGAGGTAGTCTCAAAGTC 59 NA Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 3 2 2 129 3R 19198715 19198787 AAATGAACCTTTGCACACCA 58 19198879 19198897 TCGATAGCCAGGATCACAG 58 NA InUTR Drosophila melanogaster 61 ATPsyn-Cf6 FBgn0016119 FBtr0084432 3 1 1 166 3R 19181357 19181375 GAGTACAAGCAGAAGAGCG 58 19181145 19181163 GGATCGACCTTAACATCGG 57 NA DesignNoJunction Drosophila melanogaster 61 DNApol-epsilon FBgn0020756 FBtr0084408 2 1 1 80 3R 19174157 19174238 ATCAACATGCATTCGAACGA 58 19174278 19174299 ATCCATTTGGATGAAGAACAGG 58 NA Drosophila melanogaster 61 DNApol-epsilon FBgn0020756 FBtr0084408 1 1 1 80 3R 19174156 19174237 CATCAACATGCATTCGAACG 58 19174278 19174298 TCCATTTGGATGAAGAACAGG 58 NA Drosophila melanogaster 61 CG4725 FBgn0039022 FBtr0084319 1 1 1 60 3R 18585717 18585737 CCATCCCAAGTCTATCTTCGT 59 18585677 18585695 CCTTAACAGTCCTCACCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6985 FBgn0039017 FBtr0084308 2 1 1 87 3R 18568398 18568417 GTTCTATGGGCATATGGGTG 58 18568465 18568544 CGCTAGATTATTAGATGCGGT 57 NA Drosophila melanogaster 61 Irp-1A FBgn0024958 FBtr0084327 3 1 1 80 3R 18548930 18548948 AGTATTTGAAGGCCACTCG 57 18548805 18548886 CCAAAGTTACAGACTCCGT 57 NA Drosophila melanogaster 61 Cyp6d4 FBgn0039006 FBtr0084304 2 1 1 82 3R 18524995 18525013 TTCAGCTGAGGAATACCGG 59 18525056 18525137 TTTAATATGACCATCGGGTGTC 58 NA Drosophila melanogaster 61 CG5326 FBgn0038983 FBtr0084285 3 1 1 105 3R 18358617 18358698 TGCAGATTGTCCAATTCCTG 58 18358531 18358549 GCATTGAAGGTCAGGAGTG 58 NA Drosophila melanogaster 61 CG13847 FBgn0038967 FBtr0301711 3 1 1 107 3R 18252444 18252570 TTATGTGAAGCAGGAGCCC 59 18252355 18252376 ACTTTCAACTGGTAGATCTGCT 59 NA Drosophila melanogaster 61 CG13858 FBgn0040585 FBtr0084243 2 1 1 70 3R 18144559 18144577 GCTAGTGGAGCTAGTGGTG 59 18144507 18144525 AAGGAGACCTTGTTCAGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fit FBgn0038914 FBtr0084153 3 1 1 60 3R 17710117 17710138 GTGATTCTACTTCTTTCGGCTC 59 17710078 17710098 CCTCAGACCAACGAATATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lsn FBgn0260940 FBtr0084135 3 1 1 77 3R 17691670 17691751 ATCAAGGATTTGGGCTGGA 59 17691792 17691810 AATCCAACAGAGACCTTCG 57 NA DesignRelaxed Drosophila melanogaster 61 TotB FBgn0038838 FBtr0083973 2 1 1 94 3R 16699713 16699791 CGTCTTTGATCTGTTTCGCA 59 16699848 16699866 TTCAGCAACCCTACGACTG 59 NA Drosophila melanogaster 61 KaiRIA FBgn0028422 FBtr0083938 2 1 1 80 3R 16476352 16476433 TTCTAATATCTGTGGCGACCA 59 16476292 16476310 CCTGGAACTGATTGTTGCC 59 NA Drosophila melanogaster 61 Srp72 FBgn0038810 FBtr0083911 2 1 1 145 3R 16416359 16416377 GAAGTGGCTCCTGATCCAG 59 16416484 16416562 CTGGACATGTCGTATTGATCG 59 NA Drosophila melanogaster 61 CG4562 FBgn0038740 FBtr0083859,FBtr0113250 1 2 2 80 3R 15697098 15697120 CCACATGAACTATTTATGGCTGG 59 15696710 15697058 GCGGAGATACCAATCTCCC 59 NA Drosophila melanogaster 61 CG7432 FBgn0038727 FBtr0301213 2 1 1 81 3R 15496158 15496176 TTCCCACTGGGTTCAACTG 59 15496219 15496300 GACTCGAGTATAGACACCTGG 59 NA Drosophila melanogaster 61 CG16718 FBgn0038721 FBtr0302492,FBtr0083805,FBtr0083806 1 3 3 80 3R 15461808 15461827 CAAAGTCATTGATTCGCCCA 59 15461690 15461767 CGAAAGTCCGTATATCTGCAC 59 NA Drosophila melanogaster 61 cry FBgn0025680 FBtr0083736 3 1 1 81 3R 15039536 15039710 ACCAAATGTTCCTGCACAC 59 15039755 15039773 AAGGTGGCGTCTTCTAGTC 59 NA Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634 1 1 2 82 3R 14424567 14424648 ACTTAAGGTTGCAAACTCTCG 58 14424689 14424710 AGCGCTAGAATTGTATTTGGAC 59 NA InUTR Drosophila melanogaster 61 fray FBgn0023083 FBtr0290209 1 1 5 80 3R 14411686 14412011 ATTCATTCAATAGGTGGCACAC 59 14412051 14412070 TTCGGATCTCTTTCTTGGGA 58 NA InUTR Drosophila melanogaster 61 moi FBgn0261019 FBtr0299938 2 1 1 60 3R 14081522 14081602 AGTGTTTGCCAAAGAAGTACTC 59 14081623 14081641 AGGCCAAGAATAAGCAAGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14313 FBgn0038579 FBtr0083615 2 1 1 93 3R 14017269 14017291 CAGAACTACAACATCAGCTTCTG 59 14017126 14017144 GCTGCATGATGCTAAAGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083617 1 1 2 116 3R 14010863 14011270 AGGAGGATGGAAAGATGCC 59 14010765 14010783 TCTGTACGTTTAGGCGAGC 59 NA Drosophila melanogaster 61 CG17802 FBgn0038549 FBtr0083526 2 1 1 107 3R 13629367 13629586 TAACTTCCACTGTGAGGTCTG 59 13629280 13629299 TTAGCACTCATTGCGATCAG 58 NA Drosophila melanogaster 61 AttD FBgn0038530 FBtr0083470 3 1 1 99 3R 13451118 13451136 GATCTTGCCAATGCTCGAG 59 13451199 13451294 CATGACCATTGGCGTTGAC 59 NA Nonspecific Drosophila melanogaster 61 CG31418 FBgn0051418 FBtr0083432 3 1 1 60 3R 13110020 13110038 CTAGAGTGGTAGGACCTCC 57 13110061 13110080 GGCAAGAATACGTACTTTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34278 FBgn0085307 FBtr0112473 3 1 1 60 3R 12946251 12946270 CATGGTTGCTTCTACGTCAC 59 12946291 12946311 TTCCGTAGTTGAATCAGATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MESK4 FBgn0043069 FBtr0083367 3 1 1 85 3R 12815103 12815121 ACTTTAATCCTGGACCGCA 59 12815167 12815252 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 CG14909 FBgn0038458 FBtr0083366 2 1 1 60 3R 12801132 12801153 GCCAAACAGAAGATTATCCTCG 59 12801173 12801192 CATCGTGGATAATGGACCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10349 FBgn0015350 FBtr0083364 2 1 1 93 3R 12705953 12707206 TCGTCGTAATTCTGGATCCC 59 12708169 12708187 CTCATTCAGACCTGGCCTC 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 3 5 5 123 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377363 12377382 TTTATGACTGTGGAAGCGGA 59 NA Drosophila melanogaster 61 pad FBgn0038418 FBtr0301514 2 1 1 90 3R 12170578 12170657 GCATAGGCGAATTCACACG 59 12170711 12170729 CTCGTAGTGCAACTTGGTG 58 NA Drosophila melanogaster 61 Sulf1 FBgn0040271 FBtr0083273 2 1 1 88 3R 12137144 12137162 AACTATGCATTCGTAGGCC 57 12137006 12137095 CCAGTCAATCTGTTGTATTTGG 57 NA Drosophila melanogaster 61 CG31088 FBgn0051088 FBtr0083241 3 1 1 92 3R 11776539 11776557 TGCAAGAACTGTCTATGCA 57 11776403 11776485 CCTCTTGCTGATGTAGTACTC 57 NA Drosophila melanogaster 61 CG12784 FBgn0038356 FBtr0083169 3 1 1 60 3R 11588991 11589011 TGATAGTGATCAGCTTTGCCA 59 11589032 11589051 GGTATGGCCAGAGATACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 2 2 2 80 3R 11271111 11271129 CAGTTCTGTGACAAGTCCG 58 11270982 11271067 CGTCACAGTGAGATTGAGG 58 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037,FBtr0083035,FBtr0083036 1 3 3 80 3R 10968727 10968746 CGCATTATCCAGCGTAATCG 59 10968572 10968685 GGCCTGTCTGTAGTAAATGC 58 NA Drosophila melanogaster 61 l(3)L1231 FBgn0086686 FBtr0082975 3 1 1 101 3R 10471315 10471334 GTATTTGCGAGAACAGCTCG 59 10471111 10471256 CTATATCATCAGCATCGTTAGTGC 59 NA Drosophila melanogaster 61 CG8461 FBgn0038235 FBtr0082986 3 1 1 119 3R 10339131 10339211 AAACTCAGAATGCCATTCGC 59 10339031 10339050 TAGAACTCTTGCTACCGAGC 59 NA Drosophila melanogaster 61 CG3321 FBgn0038224 FBtr0082931 2 1 2 96 3R 10152840 10152983 CACCAATTTGTTCACGGTC 57 10153043 10153061 ATCTGCCGAACTTGATCAG 57 NA InUTR Drosophila melanogaster 61 CG9624 FBgn0038213 FBtr0082897 2 1 1 60 3R 10054109 10054128 GTGCTCAATGTCTTCCACAC 59 10054068 10054088 CATCGTGCCATGAGTTATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sp212 FBgn0053329 FBtr0300406 3 1 1 144 3R 10048586 10048608 CTATGATCTGGATGACTACGGAG 59 10048246 10048482 GTCGTTAAACGTCACTGGC 59 NA Drosophila melanogaster 61 DopR FBgn0011582 FBtr0290283,FBtr0301351 3 2 2 85 3R 10030022 10030040 GTTAGCGATTGCGGATCTC 58 10017573 10029976 CTCCAAAGATCCAATATCCCAG 58 NA Drosophila melanogaster 61 Kif19A FBgn0038205 FBtr0082912 2 1 1 80 3R 9938553 9938644 ATACTGCGGGATCTGACTC 58 9938491 9938509 GGTTGTCGATTTGAGGCAG 59 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621,FBtr0112624,FBtr0290011,FBtr0112623 1 5 5 80 3R 9583492 9584187 CCGAGAACTCTAAGAAACTGGA 59 9584228 9584246 CCTTCTGACGGAGAAGGAG 59 NA Drosophila melanogaster 61 yellow-e2 FBgn0038151 FBtr0302576 3 1 1 129 3R 9232072 9232347 TTATCCACCTAATGGCGGTC 59 9231962 9231981 AGGATAGGCCTGGATTTCAC 59 NA Drosophila melanogaster 61 Su(var)3-7 FBgn0003598 FBtr0301657,FBtr0082736 1 2 2 81 3R 9093475 9093560 ATATGAGCGTTCGATCCGA 58 9093605 9093623 ATTATGCGACGAACCTCCA 59 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 3 3 3 175 3R 8450830 8450848 GTAAGGACCACTCTGACGT 58 8450612 8450691 GTTCTCATAGTTGCCCTGC 58 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 2 5 5 62 3R 8271981 8271999 AAGGGAGTCGATCTATCCG 58 8272019 8272104 GTAGTATTTCTTCTGGAACATGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17207 FBgn0038051 FBtr0082682 2 1 1 60 3R 8264442 8264460 CAAGTACTTCCAGGTGTGC 58 8264400 8264420 TCGAGACCTCAGCATTATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33098 FBgn0053098 FBtr0082580,FBtr0082579,FBtr0082578 2 3 3 60 3R 8213637 8213708 GAGCTGAAGGAAGTCTTCTC 57 8213730 8213749 CATCCTTCGAGATCAGTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 1 2 2 99 3R 8210528 8210937 ACTCACGGACTACTATTTCCC 59 8210998 8211016 GATTGTGTTTAGCCAGCCC 59 NA Drosophila melanogaster 61 GstD10 FBgn0042206 FBtr0082609 1 1 1 103 3R 8191296 8191424 ATTACCACGTAGTTTCCAGAG 57 8191213 8191231 CTGTCATCAGAACAGAGCG 58 NA InUTR Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082562 3 2 3 144 3R 8126223 8126241 GACGCACATTGAATCCCTG 59 8126347 8126615 CTCAATGACTTGTGAGGAGAC 58 NA DesignRelaxed Drosophila melanogaster 61 Cyp313a3 FBgn0038007 FBtr0082617 3 1 1 89 3R 8064464 8064482 TGCCTAAATAGGAGCTCGA 57 8064338 8064412 ATCAACCCATTTAGATGCCT 57 NA Drosophila melanogaster 61 dpr4 FBgn0053512 FBtr0300492,FBtr0300491 1 2 2 80 3R 7361557 7361703 CTCAACGTTGTGGTGTCAC 59 7361495 7361513 GGTGAGATTGATGTCGCTG 58 NA Drosophila melanogaster 61 scpr-A FBgn0037889 FBtr0082357 1 1 1 80 3R 7067026 7067112 AACAACAAGGGAAACTTCAGTG 59 7067152 7067171 GAGGATGAGTTTGTGATGCG 59 NA Nonspecific Drosophila melanogaster 61 CG10703 FBgn0037881 FBtr0082366 3 1 1 78 3R 7054256 7054274 CAAGGTGACATCTCAGCAG 58 7054128 7054214 CTTGCAACGTTCGAGTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG17726 FBgn0037880 FBtr0082352 1 1 1 80 3R 7052831 7052906 CAGATCTTCGGAGAGCTCG 59 7052950 7052968 CACAAGTTGAAAGGGCGAG 59 NA Drosophila melanogaster 61 Ugt86Da FBgn0040259 FBtr0082338 3 1 1 124 3R 6983208 6983810 CATGCAGGGAAGAATTGCT 58 6983895 6983916 CTATCACAGATGGTTCCTTCAG 58 NA Drosophila melanogaster 61 CG14695 FBgn0037850 FBtr0082335 1 1 1 60 3R 6704262 6704283 ATGGCTGGGATATTAAGTTGTC 58 6704223 6704241 ATGTATCGCAGGTAGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Art1 FBgn0037834 FBtr0082304 3 1 1 80 3R 6613242 6613261 ATTGAGGAGATTGAGCTTCC 57 6613094 6613199 GTAGAACAGGCAGTAACCC 57 NA Drosophila melanogaster 61 CG14684 FBgn0037824 FBtr0082268 3 1 1 60 3R 6532980 6532999 TTGCTTGCCTACATGATGGA 59 6533022 6533040 TGGCCTTGAAGTACTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34304 FBgn0085333 FBtr0112500 3 1 1 241 3R 6482298 6484119 CCTTTAATATAATTCCCGCGG 57 6484322 6484340 GGTTTCACCTGAGACACTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12592 FBgn0037811 FBtr0082233 3 1 1 285 3R 6165651 6165669 AGAAGGTAATTCAGCGCCA 59 6165982 6166000 GTAGCCAGCATTTGTTCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG12420 FBgn0037797 FBtr0082222 2 1 1 81 3R 6048712 6048730 CTGGTCATGTGGTCATCCA 59 6048769 6048857 GTCAGATTCAGACTTAGAACTTGAC 59 NA Drosophila melanogaster 61 CG6241 FBgn0037792 FBtr0082185 2 1 1 86 3R 5968644 5969197 GAACTAAGCGCAATCTAGACG 59 5968578 5968596 ATTGCAGGTGGAGACTCTG 59 NA Drosophila melanogaster 61 CG3925 FBgn0037780 FBtr0082174 2 1 1 86 3R 5875388 5875475 GAAGTGAAGATGATTCCGATCTG 59 5875521 5875539 AGACCATCATGTCTACGGC 59 NA Drosophila melanogaster 61 CG31415 FBgn0051415 FBtr0082127 1 1 1 80 3R 5569294 5569312 CAATACTCCAACCAGCAGC 58 5569356 5569800 CATGTTGAGCCTTCAACGG 59 NA InUTR Drosophila melanogaster 61 CG9492 FBgn0037726 FBtr0082100 1 1 1 80 3R 5493924 5494764 GAGATCAAGTCCTGCAACC 58 5493862 5493880 TACCGCATAGACGTAGTCC 58 NA Drosophila melanogaster 61 rump FBgn0260010 FBtr0082123 2 1 1 85 3R 5333095 5334020 TTGCTAATCTGGACTACAAGGT 59 5333031 5333049 TGAAAGGTCTACGCTCTGC 59 NA Drosophila melanogaster 61 CG8129 FBgn0037684 FBtr0082026,FBtr0082027 3 2 2 136 3R 5192547 5192623 AGATTATTGGTGTGGAGTCG 57 5192722 5192740 GGCATAGGCATTATAGCCA 57 NA Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 2 2 2 80 3R 5068876 5068894 CACGTGTTCGTAGTCAGAC 58 5068759 5068835 GTCTAAAGAGATTACGCAAGGT 58 NA Drosophila melanogaster 61 CG7994 FBgn0037599 FBtr0081875 3 1 1 128 3R 4417535 4417555 ACTACTTCCTTATGTCGCTGG 59 4417645 4418102 ACTCTTCCACTCTGTTCCG 59 NA Drosophila melanogaster 61 puc FBgn0243512 FBtr0081792 2 1 1 82 3R 3934027 3934046 ATCATCAACGGCAATGAACG 59 3934089 3936807 TTTCTATATCGTAGACCGCCG 59 NA Drosophila melanogaster 61 MstProx FBgn0015770 FBtr0081585 2 1 1 94 3R 3194381 3194399 TTACCAATTGCACGGTTCG 59 3194200 3194218 TAAATCCACCTCGTTGTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1234 FBgn0037489 FBtr0081599 1 1 1 81 3R 3070868 3070944 AAGGATTGGCAGAGTTTGC 58 3070805 3070824 TCCTCTAGAATGCGGTTGAG 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 2 4 5 82 3R 2582673 2583203 ACGCTACAGATCTTGGAGC 59 2582609 2582628 CTTATTCCGGTGCTCATGTC 58 NA Drosophila melanogaster 61 Ccp84Ad FBgn0004780 FBtr0081690 3 1 1 192 3R 2518524 2518603 CATTCAAGTTCATCGCCCT 58 2518759 2518777 TAGGCGTACTTGTACTGGG 58 NA Nonspecific Drosophila melanogaster 61 Ccp84Ad FBgn0004780 FBtr0081690 2 1 1 192 3R 2518524 2518603 CATTCAAGTTCATCGCCCT 58 2518759 2518777 TAGGCGTACTTGTACTGGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10277 FBgn0037442 FBtr0113198,FBtr0081722,FBtr0081720,FBtr0081721 1 4 4 83 3R 2212398 2212480 TGACGATGAGAACGCTCTG 59 2212526 2212545 CGATCAAAGGGATTGATGCG 59 NA Drosophila melanogaster 61 CG31367 FBgn0051367 FBtr0081736 2 1 1 121 3R 2187626 2187737 AACGACAAGCGCTATTTGG 59 2187523 2187541 GTTGACTCAGATGCTGTGG 58 NA Drosophila melanogaster 61 Osi1 FBgn0037406 FBtr0078588 2 1 1 80 3R 2000067 2000146 TCATGGAGGAATCGGAAGC 59 2000188 2000208 TCTTCATCAGAATGACGAGGG 59 NA Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 2 2 2 94 3R 1661584 1661603 CTCACGCAATCCAATAACCT 58 1661657 1661741 CCAAACAAATTATCATAGCCGC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300909,FBtr0300911,FBtr0300908,FBtr0078674,FBtr0300906,FBtr0300913,FBtr0078675,FBtr0300910,FBtr0078676,FBtr0300907,FBtr0078672 2 12 12 63 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587386 1587404 CATCAGAAAGCTCTCAGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG2911 FBgn0037350 FBtr0113194 2 1 2 138 3R 1448403 1449508 TCACCTTATAAGATGCCCGA 58 1448284 1448302 GATTTGGGTCATCGAGCTG 58 NA InUTR Drosophila melanogaster 61 rev7 FBgn0037345 FBtr0078699 1 1 1 60 3R 1414848 1414866 GCACAAGAACTTCTTCGCC 59 1414886 1414908 CCTTCTGATACACTATTAGCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 3 3 3 80 3R 1392053 1392072 AACTCTAATGCGAAGCTCAG 58 1392114 1392201 CGTCTCCAACTTGAAGAAGG 58 NA Drosophila melanogaster 61 CG31547 FBgn0051547 FBtr0078765,FBtr0078764 3 2 2 81 3R 1316476 1316494 CGCCATGACCATATTCACG 59 1316349 1316431 AATTGTGAGACCTCCGTCG 59 NA Drosophila melanogaster 61 CG33293 FBgn0053293 FBtr0078824 3 1 1 141 3R 1066279 1066362 GAGATTCCTTCCATTATGGAACG 59 1066160 1066178 CATTCCTCAGCTCAACCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42574 FBgn0260794 FBtr0301437 3 1 1 88 3R 614711 614729 CAGATGACTAAGGCCAAGG 57 614578 614659 AATGGCAAATCCAACATGC 57 NA Drosophila melanogaster 61 CG33927 FBgn0053927 FBtr0091931 3 1 1 103 3R 516200 516273 CTTGGGTCTATTAATGCTTCCAG 59 516119 516139 CGAATTGCCTTTAAACGACAC 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-996 FBgn0083014 FBtr0113599 1 1 1 60 3L 261891 261910 TATCGTCGTGCTGTTTACTG 58 261850 261868 AGTTCTTGGAATCCGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11131 FBgn0037204 FBtr0078558 1 1 1 149 3L 22892367 22892525 AATGAAACTCTTCACCGCC 58 22892638 22892656 TATCCGTTCTCCGAAAGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552,FBtr0078553 2 2 2 60 3L 22865844 22865865 TTAGCTATGGAGTCAAACACTG 58 22865886 22865904 CATCCAGATCTGCGTAGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552 1 1 2 80 3L 22865433 22865542 TCCTTAAAGTGAATTCTGCTGC 59 22865583 22865601 TCACCCTGTAAGTGGTGAC 59 NA Drosophila melanogaster 61 CG14450 FBgn0037184 FBtr0078537 3 1 1 97 3L 22720564 22720639 ATAGCCAACTACGACATAACCA 59 22720488 22720507 ACATACAGGATGTCGCTGAG 59 NA Drosophila melanogaster 61 CG11404 FBgn0037169 FBtr0078513 3 1 1 100 3L 22541771 22541789 TTATGGAGTGGAGTTCGGG 58 22541850 22541924 GCAAGGAGATGTGATAGATCTG 58 NA Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 3 2 2 80 3L 21819504 21819584 ATTAGCAATGGGTTCAAGGTG 59 21819626 21819644 CAACAATTCCTGACCCTGG 58 NA Drosophila melanogaster 61 CG7407 FBgn0037134 FBtr0078440 2 1 1 124 3L 21816751 21816831 CAAGGACAAAGGCGAACTG 59 21816919 21816937 AGTTCTCTTCGTAGGCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7158 FBgn0037116 FBtr0078462 1 1 1 109 3L 21670142 21670279 ATCATTGAAGGTTTCGGCA 57 21670051 21670069 TCCTTACAGTGCATTTCGT 57 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0078420,FBtr0078421,FBtr0301160 1 3 3 80 3L 21612068 21612146 AAGCAGCGCAATCAATACG 59 21612186 21612208 GGATGAATCCATCTTTGTACTCG 59 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 1 2 2 116 3L 21189472 21189552 CAATAGAGCAATGTGACTTGGG 59 21189377 21189395 TAAGCGAAGGTTCCTCCTC 58 NA Drosophila melanogaster 61 chb FBgn0021760 FBtr0089461 1 1 3 86 3L 21169619 21171205 TTGCAAATAGTTGCCGCAG 59 21171254 21171273 TGGATAAAGCCATCCAGGTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10586 FBgn0037036 FBtr0078335 3 1 1 95 3L 20949100 20949233 GGAATCAGTCTCCATATCGGA 58 20949025 20949043 TCGTAAACCAAGGGACCTC 59 NA Drosophila melanogaster 61 CG11458 FBgn0040637 FBtr0078265 2 1 1 97 3L 20898955 20898973 CTCTACTTGCCGTTCTCCT 58 20899034 20899052 ATTCTTCTGCCAACCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3288 FBgn0037030 FBtr0078262 3 1 1 114 3L 20829519 20829537 GGGAATACCTGGACAGCTC 59 20829613 20829697 ACTATACGCATCACCGAAGAG 59 NA Drosophila melanogaster 61 CG5969 FBgn0036998 FBtr0078198 3 1 1 150 3L 20467003 20467022 GACCAAGAACAAGAAAGCCG 59 20467197 20467215 CACAAAGAAGGTCAGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7290 FBgn0036949 FBtr0074858 1 1 1 163 3L 20199021 20199112 AGAAGCAAATAATGGGTGGAC 58 20198878 20198896 GTAGTAGGTCGAGCAGTCC 59 NA InUTR Drosophila melanogaster 61 CG7668 FBgn0036929 FBtr0074904,FBtr0074905 1 2 2 138 3L 19997454 19997528 CAATGAACTGTAACTTGAACGG 58 19997627 19997645 GGCATTGGTCTGATTAGCA 57 NA Drosophila melanogaster 61 CG32221 FBgn0052221 FBtr0301008 2 1 1 81 3L 19828325 19828343 AAGCCATTGGGATACACCT 58 19828385 19828469 TGACGTACTTCTTGTAACTCCT 59 NA Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 1 2 2 123 3L 19811659 19811677 GAGCTGCACCTGAATAGGA 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 serp FBgn0260653 FBtr0074953 2 1 1 95 3L 19695587 19698916 CACCTGTGATATCGACAACG 58 19695511 19695529 GATGTACCATCCTCCGAGC 59 NA Drosophila melanogaster 61 CG6841 FBgn0036828 FBtr0075068 1 1 1 80 3L 18900208 18900229 TAAGGCTGTCATTGGAATAGGA 59 18900270 18900369 TCCTTTGCGCAGAATTCAG 58 NA Drosophila melanogaster 61 Cyp12c1 FBgn0036806 FBtr0075091 1 1 1 102 3L 18679021 18679039 GAACCCGTCATCCACTACC 59 18678760 18678779 CGGCACTTCTATTCTTTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Sgf11 FBgn0036804 FBtr0113179 1 1 1 60 3L 18674639 18674658 CCAACTATCTGTACCAGTCG 57 18674598 18674618 TGTGTCTCGTTAAAGATTCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0100566,FBtr0100567,FBtr0075111 1 3 3 80 3L 18594289 18594371 GGGACTTGGTCACTATTTCGA 59 18594229 18594251 GTCAGCATATAAGTGTGATTGGG 59 NA Nonspecific Drosophila melanogaster 61 CG13699 FBgn0036781 FBtr0075134 3 1 1 87 3L 18150172 18151129 CATAACCAATTTCCTCGCTGG 59 18150105 18150123 CTCTCCACCACTCAAACCA 59 NA Drosophila melanogaster 61 Or74a FBgn0036709 FBtr0075247 2 1 1 80 3L 17321267 17321397 CAAGGCATTTACGAATCCCT 58 17321206 17321224 CCTAGTGCCAGTAACTCCA 58 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302647,FBtr0302649,FBtr0302651,FBtr0302648 2 5 5 80 3L 16984290 16984312 GATGATTACGACTCCTTTGAGAC 59 16984350 16984432 GTCATTGTAGTTTCTTTGCCG 58 NA Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323 2 1 2 188 3L 16766733 16766826 CTAAGTCAAGAATTCTCGCAGAG 59 16766974 16766992 GTGGACTGGGTGTCTTCTC 59 NA InUTR Drosophila melanogaster 61 mRpS34 FBgn0260460 FBtr0075379 1 1 1 60 3L 16341376 16341395 TACGTAACATGTTCCAGCGA 59 16341418 16341436 GACTGCACCTTCAGAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33257 FBgn0053257 FBtr0075378 1 1 1 92 3L 16339425 16339443 GTACGGCCAAGGATTACGT 59 16339804 16339822 TAGCCATTCCTCTTGTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG34247 FBgn0085276 FBtr0112441 2 1 1 83 3L 16254589 16254675 TGAAGCTGCTGATCTTTGC 58 16254524 16254542 GGTAGTACCCATAGCTGGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13055 FBgn0036583 FBtr0075482 1 1 1 78 3L 16244611 16244629 TTAGCCGAGCCAGTTTCTC 59 16244551 16244569 GTTAGCGAAAGGCTCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42570 FBgn0260776 FBtr0301333 1 1 1 80 3L 15711734 15711807 CCTTTACGATTCTACTGTTCGT 58 15711848 15711866 AGTCGTTCAATCGCATCTC 58 NA Drosophila melanogaster 61 Eig71Eb FBgn0004589 FBtr0075571 1 1 1 70 3L 15643376 15643456 TTGTATATTGACCCTTGAGCG 58 15643488 15643506 TTTATTGTGCAAGGGCTCG 58 NA DesignRelaxed Drosophila melanogaster 61 mex1 FBgn0004228 FBtr0075602 3 1 1 146 3L 15511424 15511442 GAATGCCTCAAATGTCCCG 59 15511017 15511039 CTTATCCTTGTGATAGAAGACCG 58 NA DesignNoJunction Drosophila melanogaster 61 Cep135 FBgn0036480 FBtr0075638 1 1 1 80 3L 15120681 15120703 ATCAGGAGGACGATGATATTAGG 59 15120742 15120854 GCAACTGATCCAATGTTTGC 58 NA Drosophila melanogaster 61 CG18581 FBgn0036466 FBtr0075666 3 1 1 72 3L 15042956 15042974 AAGATGGCGAGTTCTTCGA 59 15042902 15042925 GGTATGACATCAGTTGGTTTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tom FBgn0026320 FBtr0075620 3 1 1 62 3L 14962616 14962634 GAGGAAACTGGTCAAACCC 58 14962660 14962678 AGAGTCTTCCGGAGTAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 3 2 2 62 3L 14786348 14786844 GATCATGAGCGATGAGGGT 59 14786870 14786888 TCCAGTGTATAACCACGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Meics FBgn0025874 FBtr0075791 2 1 1 75 3L 13957234 13957252 CAGGAGAGTGAACCATTGC 58 13957072 13957093 GAATGGATACTTCATCTTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 2 2 2 80 3L 13432678 13432759 TAAGTCGGACTGTCAGATCC 58 13432617 13432637 ATTCCTACAGTAGTAACGGGT 58 NA Drosophila melanogaster 61 CG14115 FBgn0036343 FBtr0075893 1 1 1 93 3L 13054325 13054401 TCCTTTGGTCTACTGGCTG 59 13054250 13054268 GCAGTGCATAGTTGGACTC 58 NA Drosophila melanogaster 61 CG34242 FBgn0085271 FBtr0112436,FBtr0300028 2 2 2 86 3L 12527191 12527209 TTCGTTGGATTCGTGTCCT 59 12527257 12527277 TTTCTCAGTGTTAACCATGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6793 FBgn0036242 FBtr0076051 2 1 1 61 3L 12036112 12036133 GTTATTGCACCTAATTGCAGAG 58 12036216 12036234 CCAATTCCTTGGCTTTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0302137 2 1 3 60 3L 11815191 11815344 GTTTGTAGCCGAGAATATTGGT 58 11815152 11815171 AGAGTTTCTCTTTGCCTCTC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0076080 1 1 3 242 3L 11815068 11815089 CCGATTAGTCTGCATATCAGTG 58 11814496 11814514 CATCATTCATTGCCTCGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TfIIEalpha FBgn0015828 FBtr0076108 2 1 1 96 3L 11676422 11676441 TATGAAGGGTATGCGAGTGG 59 11676499 11676586 GTCGACATCAGGAATCTTGG 58 NA Drosophila melanogaster 61 CG7368 FBgn0036179 FBtr0110884 1 1 1 80 3L 11596577 11596665 ACCAACAGAATGTGGTGCT 59 11596706 11596727 GTATACTAATGGTTGTCGTGCC 59 NA Drosophila melanogaster 61 CG7560 FBgn0036157 FBtr0076173 3 1 1 80 3L 11418726 11418745 CACGAGGATCAGGATTTCTC 57 11418785 11418870 ACAGACTGATATTGTTTCACCC 58 NA Drosophila melanogaster 61 SuUR FBgn0025355 FBtr0076203 3 1 1 81 3L 11059302 11059321 AGGAGGTATTCAGTAAGCGC 59 11059363 11059469 CGAAAGTCCTTGATGTACTCG 58 NA Drosophila melanogaster 61 Cpr67Fa2 FBgn0036109 FBtr0076192 3 1 1 195 3L 10884856 10884876 AAATCAGCCAATATGTTCCGC 59 10885271 10885289 TTCCACCAATTCCGGACTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or67d FBgn0036080 FBtr0076297 2 1 1 80 3L 10266624 10266769 CGAGGATATCTATAGAGAATACGGA 58 10266806 10266825 GTCCATGTAATGCGGATTCG 59 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076348 1 1 5 80 3L 9965432 9965453 CCGGTGTATAAACTTAGTGTGG 58 9965494 9966036 GTTTGCAGGGACATTCTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34382 FBgn0085411 FBtr0112620 1 1 1 94 3L 9875638 9875656 CTATCAACTGCCATTGCCG 59 9875714 9875793 GAATCACTTGGTAGGGCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG14174 FBgn0036036 FBtr0076402 1 1 1 73 3L 9712475 9712493 GAAACAACCTCCGTTGGTG 59 9712594 9712612 TGTTGATGACCACGAACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076397 2 1 2 275 3L 9701357 9701375 CTACGCTCCAGTAAAGCCT 59 9701755 9701773 ATGCTGCTCCTCATAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ir67a FBgn0036010 FBtr0076422 1 1 1 86 3L 9536289 9536436 CCCATTGTACAAGAGTGGT 57 9536221 9536239 ATTTCCGCTAACCATCACC 57 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323 3 1 5 83 3L 9424366 9424385 GGAACTGGAAACAGCATCTC 59 9424431 9427511 GAGCCTCATCCGAACTCTC 59 NA InUTR Drosophila melanogaster 61 Cpr67B FBgn0035985 FBtr0076455 2 1 1 214 3L 9397991 9398010 GAAGTGCTACATCTTGGCTG 59 9398555 9398573 TCACACGACCCATGTAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr67B FBgn0035985 FBtr0076455 1 1 1 213 3L 9397992 9398010 AAGTGCTACATCTTGGCTG 57 9398555 9398573 TCACACGACCCATGTAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 3 2 2 83 3L 8966610 8966630 CCTCGTATTTGGATGTTAAGC 57 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140,FBtr0076514,FBtr0076513 3 4 4 159 3L 8960298 8960387 GTCAGAAATACACGCACCC 58 8960509 8960528 TTCTTCACCGTCCAGAAGTC 59 NA Drosophila melanogaster 61 CG32024 FBgn0052024 FBtr0076580 1 1 1 100 3L 8801205 8801224 CCCAATGATTTAAGCTGCCT 58 8801345 8801369 CTGAAGTATGGTTTACTTGAAGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 3 4 4 129 3L 8461059 8461077 ACAAGATGGTCAGCCTCAC 59 8461168 8461248 AATATCAATGGGCAATGGCTC 59 NA Drosophila melanogaster 61 exo70 FBgn0035892 FBtr0076612 2 1 1 80 3L 8408753 8408829 TACGAAATTTACTCTGGAGTGC 58 8408870 8408888 CATAGCGTTGATCTCGTGC 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 1 3 9 267 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350939 8350957 AAATGATGCGGGTCATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13685 FBgn0035816 FBtr0076809 2 1 1 60 3L 7740909 7740927 AACAGGCATACTCGCTACC 59 7740950 7740969 CCTCCAGATTGTTCTGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32377 FBgn0052377 FBtr0076820 2 1 1 60 3L 7684667 7684688 GATAAATCTCCTCTCCATCCTG 57 7684628 7684648 CCTCTTCGTCTATCTTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 2 2 2 80 3L 7344758 7344778 GAAGTTGACGGCTATATTGGG 58 7344817 7344905 TTCTCCGTGTACTCTTTCAGAC 59 NA Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833 1 1 2 106 3L 7228390 7228537 TATTGTACTCAGTCCCGGC 58 7228607 7228625 GAGGACAGGCACTGTACAG 59 NA Drosophila melanogaster 61 bin FBgn0045759 FBtr0076900 3 1 1 80 3L 6984899 6984919 GATCAAGGAATCACCAACTGG 59 6984959 6985793 CCTCGAAAGAATTCGTAGCTC 59 NA Drosophila melanogaster 61 CG10077 FBgn0035720 FBtr0300937,FBtr0076940 2 2 2 175 3L 6948257 6948488 ATGAACATGTACAACGGACAG 58 6948102 6948121 CCATTGAAACCTGGGTATGG 58 NA InUTR Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076946 2 1 2 95 3L 6906622 6906870 ATATGTTGGGCTAGCTGGAC 59 6906546 6906564 AACTGGTCACTATTCCCGC 59 NA InUTR Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 1 1 1 162 3L 6325581 6325601 CAAGAGCACATTCATGTTCGA 59 6324739 6325180 GTCGTTGCGATTGTTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10472 FBgn0035670 FBtr0077066 3 1 1 101 3L 6055605 6055623 AGAATGTGATCGTGCACGA 59 6055461 6055543 GCTGGATGTACTTGTTGAACTC 59 NA Drosophila melanogaster 61 CG10483 FBgn0035649 FBtr0077077 1 1 1 80 3L 5911513 5911531 CATCTAAACAACGTGGGCA 58 5911257 5911469 AATCGTGGTCTGATCCGAG 59 NA Drosophila melanogaster 61 CG5537 FBgn0035639 FBtr0077112 2 1 1 145 3L 5804408 5804491 TATTGCGCGACAAGAACAC 59 5804600 5804618 CAGTCCCTCGTAAATCGCA 59 NA Drosophila melanogaster 61 spo FBgn0003486 FBtr0077130 2 1 1 60 3L 5584353 5584374 CACGATTATCTTCATGCTGGAG 59 5584314 5584333 TACTAGATTTCCAACCGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gen FBgn0027914 FBtr0077176 1 1 1 80 3L 5144434 5144523 TTTGGATAGAATGAGAAGCTGG 58 5144375 5144394 CAGATGGATTTGTCGTCCAC 59 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 2 3 3 149 3L 4551932 4552115 TCATATCGTTCCAAATGGCG 58 4552224 4552245 GTCTACCCAGAAGTATTTGGAC 58 NA Drosophila melanogaster 61 CG11345 FBgn0035546 FBtr0073334 1 1 1 61 3L 4458028 4458110 GAAAGTCCTTATGCTGGCT 57 4457985 4458003 ACAAATGCGAGACATCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073343 2 1 3 81 3L 4299058 4299077 CAACTGACACCATAAGCCAG 59 4298762 4299014 GTGTGGCGTGACTTTATGG 59 NA InUTR Drosophila melanogaster 61 CG32252 FBgn0052252 FBtr0073251 3 1 1 96 3L 4222349 4222419 AGAAGAAGTCTGCTCATGGT 58 4222272 4222290 AATACGTTTCTGGCAGGGT 59 NA Nonspecific Drosophila melanogaster 61 CG18675 FBgn0040696 FBtr0073218 2 1 1 164 3L 4174625 4174645 CTAATGAGCGACTATTTGGGT 58 4174830 4192200 CTCAAGTTTCTTGAGTTCCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Chd64 FBgn0035499 FBtr0073270 3 1 1 105 3L 4115626 4122156 AATTAACTCCAAGTACAGCGAG 58 4115542 4115560 GAAGAAGTTGTCGGTGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 3 2 2 85 3L 3463214 3463235 TAAAGACAGACTTGCCTACAGG 59 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 CG14957 FBgn0035412 FBtr0073038 3 1 1 112 3L 3187597 3187678 GTATCACTGCTCCTGGTCC 59 3187751 3187772 ACCGATTTATCCACATTCTGAC 58 NA Drosophila melanogaster 61 CG32486 FBgn0052486 FBtr0073004 2 1 1 101 3L 3057575 3057651 CTACCACGAGACCAACGAG 59 3057492 3057511 TCCTTGATCCTATCGTCGTG 59 NA Drosophila melanogaster 61 CG1240 FBgn0035370 FBtr0072969 3 1 1 207 3L 2767026 2767044 AGCAACCCTATAGAGACGC 59 2767289 2767307 GAATTTCACGACGCAGGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8993 FBgn0035334 FBtr0072889 3 1 1 70 3L 2372442 2372460 TGATTGTGGACTTCTTCGC 58 2372556 2372574 CACAATACTCTCGATGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 2 2 2 105 3L 1476660 1476678 GTATACGCTTTGCTAGCCG 58 1476514 1476591 CGAAGGAAACGAAGACCAG 58 NA Drosophila melanogaster 61 CG32320 FBgn0052320 FBtr0300067 2 1 1 80 3L 1401196 1401274 AGAACCTGGGAACTCTTCG 59 1401318 1401336 ATCTTATCTCGCGGTTGGG 59 NA Drosophila melanogaster 61 CG2211 FBgn0035211 FBtr0072723 3 1 1 113 3L 1334446 1334520 TGTTTCTGTTCATCAGCCG 58 1334351 1334369 TCACATTACGATGCAGAGC 58 NA Drosophila melanogaster 61 CG9186 FBgn0035206 FBtr0072727,FBtr0072728 3 2 2 141 3L 1312656 1312733 AGTTTGGGTGATAGGGCAC 59 1312533 1312553 CACGTATTTCTCGATGAAGGC 59 NA Drosophila melanogaster 61 LysC FBgn0004426 FBtr0072629 3 1 1 76 3L 1210596 1210614 GACCAGCTGAACAAGTGAG 59 1210654 1210672 TAGTTCTCAGGACCAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysB FBgn0004425 FBtr0072628 2 1 1 161 3L 1207653 1207671 TCTCCTACAATGAGTGCGG 59 1207796 1207814 AGAAGCAGTCATCGATGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13912 FBgn0035186 FBtr0072625 3 1 1 131 3L 1189808 1189895 ATGTCACATACTGTGAGGGTC 60 1189988 1190006 ATCGTATTCCGGCTTGAGG 60 NA Drosophila melanogaster 61 CG32344 FBgn0052344 FBtr0072576 2 1 1 80 3L 323984 324058 AATTCCATAGAGTACGTGGTG 57 323924 323942 CAACGTTTCGTTCAGTTGC 58 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486,FBtr0072487,FBtr0072485 1 3 3 92 3L 213969 214042 ATCTCTTGCGGATGGTGAG 59 214098 214116 TTGTCCGACGATATCACGA 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 3 9 9 80 3L 142813 142833 CTGCTTAGTGCAGAATTAGGC 59 142873 142956 CAGGTCGAAAGAGTTCTTTGC 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2444 FBgn0082987 FBtr0113515 2 1 1 60 2R 15330666 15330686 CTCTGATGCTCAGTGAATGTG 59 15330706 15330726 ATGTAGCAAGTCCAACTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 2 1 1 66 2R 7754825 7754843 AATATGGCCTTACCAGGGA 57 7754873 7754966 AAGCTTCGTACGACCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 1 3 3 85 2R 20865280 20865298 CAACATGTGCTTCTGTCCC 59 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113119 1 1 3 130 2R 20849259 20850513 GATAAGATGAAACTGCCTGCG 59 20849149 20849167 ATGGCACCAGTATGGTGTC 59 NA InUTR Drosophila melanogaster 61 CG30423 FBgn0050423 FBtr0300122 3 1 1 112 2R 20762785 20762868 CATTGGTGATCACCTGGAC 58 20762691 20762709 GAACATGGATCCGTATGGC 58 NA Drosophila melanogaster 61 Lcp9 FBgn0025578 FBtr0072430 2 1 1 88 2R 20667813 20667889 AAGTTTGTGATCGTTCTTGCC 59 20667745 20667763 AAGTTAACCTCGGAGTCGC 59 NA Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 2 2 2 68 2R 20046538 20046556 ATTCGCAATGATTGCAGCA 59 20046435 20046506 TGGGTGGTACAATTTGGAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166,FBtr0072167 2 2 2 66 2R 19921910 19921928 GTGATGCGAAAGTGTTCGA 58 19922223 19922243 CTGTTCAAACTCTCGGTTGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3163 FBgn0034961 FBtr0072165 1 1 1 60 2R 19917656 19917674 AGCCAATCACATAACACGG 58 19917698 19917716 GTTGTCCTCCGAAATCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-catenin-related FBgn0029105 FBtr0072148 3 1 1 90 2R 19847593 19847669 CTGATGCTGAGAAATGCGA 58 19847719 19847741 CCAGAATACTCAACCATTTCTCC 59 NA Drosophila melanogaster 61 CG16787 FBgn0034940 FBtr0072207 1 1 1 60 2R 19844479 19844497 GGAACCCTAAGGAGAACGA 58 19844437 19844455 CTCAGAACCTCGTAGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3735 FBgn0034933 FBtr0072210 1 1 1 80 2R 19826122 19826198 CTTTGGCAGTCAAGATGATCAG 59 19826063 19826083 GTATTCCCGGAGTAATCTCCC 59 NA Drosophila melanogaster 61 l(2)dtl FBgn0013548 FBtr0072085 2 1 1 143 2R 19590165 19590183 TTTACAACAAGTTGCGGGC 59 19590564 19590582 GTTCCGGATTGAAGTCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30184 FBgn0050184 FBtr0072065 2 1 1 60 2R 19452032 19452052 CGAATCAGAAGATGCATCCAC 59 19452074 19452092 CGGCTGATGAAGTACAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr59f FBgn0041234 FBtr0072059 2 1 1 91 2R 19430076 19430149 CGAGGGAAAGACTATCTTCCT 58 19430200 19430220 CACGGAGATGAGTAGTAACCA 59 NA Drosophila melanogaster 61 Gr59e FBgn0041233 FBtr0072115 2 1 1 60 2R 19428992 19429012 TCGTATCTGGTTCATCCTGTC 59 19428886 19428972 GCAAAGGTTACATTTCTGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG3502 FBgn0046253 FBtr0273227 3 1 1 80 2R 19233237 19233327 AGGTGTCAGGATCATGATAGTC 59 19233178 19233198 CACCAAATAGGTTGAGGTCCT 59 NA Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071857 3 1 2 105 2R 18496038 18496056 CGTAGTTAGTCATGGGAGC 57 18496123 18496197 CTTCAATTGCACCAACTTACC 58 NA InUTR Drosophila melanogaster 61 CG4294 FBgn0034742 FBtr0300409 2 1 1 80 2R 18489311 18489464 CGATGACTACAGGTTAATCGAC 58 18489252 18489270 TACAGGCGTATCTCCTTGG 58 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 3 2 2 159 2R 17969992 17970011 GATCTTCCGACAGATGTGGA 59 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 CG4372 FBgn0034665 FBtr0071738 1 1 1 60 2R 17726165 17726183 ATCAAATTGTTCGGCACCA 58 17726123 17726144 AGTTCCACGTACTTATCAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30403 FBgn0050403 FBtr0114523 1 1 1 80 2R 17598165 17598634 TTGGACACGAATGAGTTGG 58 17598103 17598122 CTTAATCGGCTTCAGTCTGG 58 NA Drosophila melanogaster 61 CG42380 FBgn0259726 FBtr0299992,FBtr0299993 3 2 2 278 2R 17556965 17557042 CGAACAAATAATGTCCATACCG 58 17556708 17556726 TTCCATGCCTTAGCTTAGC 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rae1 FBgn0034646 FBtr0071683 1 1 1 83 2R 17547085 17547103 TTAAGACGTGCCACATGGT 59 17546971 17547039 TGTCCCAGAACTTTAGGGTC 59 NA Drosophila melanogaster 61 PTP-ER FBgn0016641 FBtr0071686 2 1 1 171 2R 17508770 17508845 TTACATCAAGGGACCCGAC 59 17508617 17508635 GATTTGCTCCCTGTCAACG 59 NA Drosophila melanogaster 61 Sara FBgn0026369 FBtr0071641,FBtr0071642 1 2 2 80 2R 17372489 17372573 GGTCAAGATTGTTAACATGAGC 58 17372613 17372632 CTGCCCATATGATGTAGTCC 57 NA Drosophila melanogaster 61 CG33704 FBgn0053704 FBtr0091692 1 1 1 137 2R 16837778 16838066 GAGGAACTGGAACGAACTC 57 16838165 16838185 CTAGTAGTCCTCCCAAGTGAG 58 NA Drosophila melanogaster 61 dpr FBgn0040726 FBtr0086238 3 1 1 95 2R 16633395 16633515 TATTCTGGTACAAAGGCAGC 58 16633573 16633591 CAGTCCAATCATCCTCGAC 57 NA Drosophila melanogaster 61 rig FBgn0250850 FBtr0086252 3 1 1 81 2R 16522392 16522469 AACCGAGTTGACCAATCTG 57 16522329 16522347 GCGTAATTTGAACGTGGAC 57 NA Drosophila melanogaster 61 CkIIbeta2 FBgn0026136 FBtr0086278 1 1 1 209 2R 16177539 16177560 CCATTGGTTTGAGTGATAATCC 57 16177730 16177842 TAAAGCCATAAAGCCTGGG 57 NA DesignRelaxed Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319,FBtr0086318,FBtr0086317 1 3 3 87 2R 16143063 16143140 TCACTCAGGGAAATTGAATTGG 59 16142997 16143017 AGGAGTGTATGTAGAAACCCA 58 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 1 2 4 81 2R 15196009 15196085 CCAATGAGGTGATCTTCGTG 58 15195947 15195966 AGACCCTTCAATAGACCCTG 58 NA Drosophila melanogaster 61 Vha100-3 FBgn0028669 FBtr0086602 1 1 1 60 2R 14796859 14796879 ATGTCGGAGATTTGGATTCAC 58 14796819 14796837 ATACTGAGCCCAATACCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0300593,FBtr0089970 3 2 2 80 2R 14745202 14745222 CATTGAAGGAACCTTATCGGG 58 14744893 14745164 TTAGATCCTCAATAACCTCTGGC 59 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 1 4 4 80 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529503 14529522 ATCATGGTATTTAGCTCGCC 57 NA Drosophila melanogaster 61 CG18540 FBgn0034326 FBtr0086762 1 1 1 101 2R 14187045 14187063 TGAATCTGCGAATTGAGCG 59 14187128 14187207 TACGCATCTCGACCATCAC 59 NA Drosophila melanogaster 61 CG10915 FBgn0034308 FBtr0086746 2 1 1 182 2R 14049358 14049457 CCTCATGAAGTATATTGAAGAGGG 58 14049598 14049616 AACAGGACTTTACGCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG34196 FBgn0085225 FBtr0112389 2 1 1 60 2R 13997581 13997600 CCATTCCCATGGACTATGAC 57 13997620 13997641 CGAAATAAGGCTGGATAATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 2 1 1 118 2R 13934588 13934606 AGAAGATCTACCAGGCGGA 59 13934307 13934506 AGATACATCACTCTCGGCC 58 NA DesignNoJunction Drosophila melanogaster 61 Mapmodulin FBgn0034282 FBtr0300410,FBtr0086822,FBtr0113091,FBtr0086823 1 4 4 80 2R 13756307 13758848 CGCAAAGTAAATCAGATCACAG 58 13756248 13756268 TGTGTATTCATCTGTAAGGCC 57 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0301182,FBtr0301183,FBtr0299817 1 4 4 80 2R 13620072 13620148 GGGCGCAACTAACTTATGG 59 13620192 13620210 GGAACATAACACCGCACAG 59 NA Nonspecific Drosophila melanogaster 61 CG6484 FBgn0034247 FBtr0086903 1 1 1 80 2R 13470795 13470813 TGCCGATATCGATGACGAG 59 13470317 13470752 GACAGAATGTTGACCTGTGG 58 NA Drosophila melanogaster 61 CG6520 FBgn0034224 FBtr0086953 2 1 1 60 2R 13363226 13363245 AAATAATGGAGCTGCAAGCG 59 13363185 13363206 CCATCTCGATCGTTTAGATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086912,FBtr0086913,FBtr0086915 3 4 4 86 2R 13311460 13311542 TCGTCATAGGAATCTGCGG 59 13311591 13311610 TTACCCATGGAACGTCTAGG 58 NA Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0114629,FBtr0087019,FBtr0114627,FBtr0114628,FBtr0114625 3 6 6 85 2R 12899046 12899129 TGAGCAAATCGGTTCAACG 59 12898979 12898998 AGTTAATGCGATTCTGCGAC 59 NA Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051,FBtr0087052 3 2 2 60 2R 12843402 12843421 GACAAGGTGATTAAGCGCTG 59 12843442 12843462 GCAGAAAGTATTCTCCATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6421 FBgn0025827 FBtr0087043 3 1 1 72 2R 12759880 12759955 GGTCATGTGCTGGATAAGC 58 12759991 12760009 CATTGCAACCACTAATGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG42392 FBgn0259738 FBtr0300043 2 1 1 60 2R 12653060 12653081 GTTAACAACAATTCTGGTGCTG 58 12653021 12653039 CAACATGGATCGCTTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DAT FBgn0034136 FBtr0087125 2 1 1 80 2R 12448479 12448561 CAAATTGTAGACCGTTTGAGAG 57 12448420 12448438 TTCCCATGGCATACAAGTC 57 NA Drosophila melanogaster 61 Menl-1 FBgn0029154 FBtr0100116,FBtr0301869,FBtr0100115 2 3 3 60 2R 12306463 12306536 CAAGTGCAATAAGGCCTTGG 59 12306422 12306440 TCCATGGATACACAAACGC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42372 FBgn0259718 FBtr0299971 3 1 2 80 2R 12179145 12179163 CTTTCTGGGAAGAGTTCGC 58 12179206 12179280 CGCTTAAAGCTGAATTCCAC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 fidipidine FBgn0025519 FBtr0087185 2 1 1 81 2R 12150735 12150755 TGGAGGACCAATTGAATACCT 58 12150618 12150692 TCGAGGAGCTTTGGATCTG 59 NA Drosophila melanogaster 61 CG15709 FBgn0034100 FBtr0087186 2 1 1 150 2R 12142418 12142734 AAATATGGCTACAACCTCTCCA 59 12142289 12142307 CACTAATCTCCTCCAGCGG 59 NA Drosophila melanogaster 61 CG8435 FBgn0034084 FBtr0087249 1 1 1 111 2R 12057693 12057711 AGTACAACACGGTGGAGAC 59 12057540 12057558 ACACGAGAGCTTCCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 2 2 2 117 2R 11997163 11997183 CTGCGGGTCTATAAGATTGTC 58 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 CG33462 FBgn0053462 FBtr0087284 3 1 1 81 2R 11584875 11584960 GAGTACTTAAATCACATACGTCCG 59 11585000 11585018 TAAACCAGGTGAGCTGGTC 59 NA Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393 2 1 2 149 2R 11185420 11185495 GGATCATGAAGCAGTGGGA 59 11185289 11185311 GGATACCTTCTATCAGTTTGTGG 58 NA Drosophila melanogaster 61 Cyp6a19 FBgn0033979 FBtr0087453 1 1 1 80 2R 10766322 10766343 GAAAGGTACAATGGTAAACTGG 57 10766381 10766456 CCTTAGCGATTCATTGATAACC 57 NA Drosophila melanogaster 61 Ercc1 FBgn0028434 FBtr0087448 2 1 1 202 2R 10741048 10741124 TCCACACCAGAAGCTACTC 58 10741290 10741308 GCTATTTGCTGAGGAACGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087445,FBtr0087444 2 2 2 62 2R 10696990 10697008 CTCCTCTTACACCCAGCAG 59 10697095 10697114 AAACGCTCATCAAAGGACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12857 FBgn0033963 FBtr0087469 3 1 1 102 2R 10646917 10646995 TTTACCAATCCCAAGCTTAGTG 58 10646836 10646857 CTCTATGCATTTCGAGATCCTC 58 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0289934 3 1 4 82 2R 10641389 10641470 AGAGACACATGACATCAATGAG 58 10641328 10641346 ACGATTGTGTTGGATCTCG 58 NA Drosophila melanogaster 61 CG10139 FBgn0033951 FBtr0087433 1 1 1 77 2R 10533021 10533040 CCAAGAAGCATATGAAGCAC 57 10533137 10533155 CGGATGACCTGTTTAAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34444 FBgn0085473 FBtr0112748 1 1 1 88 2R 10257485 10257565 GTTCGAATTGCATGGATTAGG 57 10257613 10257633 CATTGAGATCTCCCAATTGGT 58 NA Drosophila melanogaster 61 CG10102 FBgn0033927 FBtr0087559 3 1 1 135 2R 10249290 10249457 CCCAATCGTTAGACGAGCA 59 10249173 10249195 TGGAAGAAGTCCATGTAGATCTG 59 NA Drosophila melanogaster 61 CG8494 FBgn0033916 FBtr0087535 3 1 1 106 2R 10130374 10130483 GAGCTAAAGGAAACTACAATGC 57 10130550 10130568 GTATTCGCTCGGAAATGCA 58 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 3 4 4 98 2R 10059939 10059957 TCTACTGGGTCACGTTTGG 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 CG8323 FBgn0033903 FBtr0087521 2 1 1 86 2R 10053016 10053097 CATCAATTCCTTCCGGCTC 58 10053147 10053165 ATTCCGTAGGACACCTCAC 58 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100452,FBtr0100453 2 3 3 235 2R 9842538 9842726 ATTCAGCGCAAGAACAAGC 59 9842925 9842943 TTCCTTTGTGCTTCCTCAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG13343 FBgn0033882 FBtr0087585 3 1 1 60 2R 9746969 9746987 GCATGCTGCTATCAATGCT 59 9747008 9747029 ACTATGGAGCTGGTATCTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6357 FBgn0033875 FBtr0087638 3 1 1 92 2R 9728396 9728415 ATTCGTAAGGAAGAAGCCAC 58 9728467 9728546 AAAGTCAATCAGGAACTTCTCC 58 NA Drosophila melanogaster 61 CG4688 FBgn0033817 FBtr0087744 1 1 1 75 2R 9127904 9127922 ATCATGGAGCGTTACCTGG 59 9128053 9128071 TCACGATGGATAAGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4679 FBgn0033816 FBtr0087759 3 1 1 111 2R 9126589 9126607 GATACCCATGTCCAATGCG 58 9126442 9126515 CTCTTGGTGCATAAACAGCT 58 NA Drosophila melanogaster 61 CG4676 FBgn0033815 FBtr0087743 3 1 1 80 2R 9123746 9123816 ACACTAGTATCCGCAAGGA 57 9123860 9123878 GACAATCCTGGCAAGAGTG 58 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0087800 2 1 3 133 2R 8837581 8839685 CACAATGGCCTACAAGTGG 58 8837466 8837484 AGACCAACATATCGCCCTC 59 NA InUTR Drosophila melanogaster 61 CG17019 FBgn0033783 FBtr0087806 3 1 1 92 2R 8821092 8821183 GACTGCAAACGCTACTACTG 59 8821019 8821037 ATCTGTCCTTGACAGTGGT 58 NA Drosophila melanogaster 61 CG30488 FBgn0050488 FBtr0087818 1 1 1 80 2R 8735310 8735404 GGAAATTCATGCAGTAGGTGAG 59 8735251 8735269 AGGATGCCAGTCTTCAAGG 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 2 8 8 93 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560464 8560483 GACGAAACTCGTAAAGTCGG 59 NA Drosophila melanogaster 61 CG30055 FBgn0050055 FBtr0087827 1 1 1 139 2R 8477714 8477735 CGAAAGTTCAAAGTTCACATGC 59 8477835 8477952 ATGACAGATCTTCCTGCGG 59 NA InUTR Drosophila melanogaster 61 CG8550 FBgn0033742 FBtr0087935 1 1 1 60 2R 8360478 8360501 CTATGTAAGAGCAAAGTTGGAAGG 59 8360518 8360538 TTTCTCCTCAGGCAAATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr49Aa FBgn0050045 FBtr0113359 3 1 1 98 2R 8264213 8264293 CACTGCTCTTCATAGCAGC 58 8264352 8264373 CCTGTCTGATAATTGGAATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087903,FBtr0087902,FBtr0301874 2 3 3 60 2R 8226255 8226273 AAGTACAAGACCAATGCGG 58 8226294 8226315 ACTTCATACACTGCGTAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13189 FBgn0033665 FBtr0088038 3 1 1 60 2R 7787687 7787705 GAGTATACGCCTTTCTGCC 58 7787728 7787747 CCGTAGACGAAGATCGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 1 4 4 270 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393725 7394162 GAACTCGTGCTTCAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 2 2 2 179 2R 7263253 7263271 CACCCGATGTGATTACCCT 59 7263414 7263754 GATAGCTGTCCGATTTGCC 58 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 3 4 4 80 2R 7101697 7101781 AAGTAGTGATACGGATGAGTCC 59 7101821 7101840 GGCGTCATTGATAACGAGAG 58 NA Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 2 2 2 80 2R 5915137 5915219 AACCTCAAAGTGAGAGCTG 57 5915262 5915281 AATAAACACCTGTTTCCCGA 57 NA Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 1 2 2 80 2R 5786778 5786866 GCACATGAAGGTGATGTGG 59 5786716 5786737 CACCTATAGAGCATGTAGAGGA 58 NA Drosophila melanogaster 61 CG12923 FBgn0033461 FBtr0088379 2 1 1 60 2R 5775742 5775760 CGACGAGCTGTAAGAATCC 58 5775783 5775802 TGTTGTGCATTGTAAGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088486 2 1 4 60 2R 5717356 5720993 ATTCCAGCTTAGCGAACGA 59 5717314 5717333 TTTGAATCTGGTCGTGATCG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 3 2 2 85 2R 5608260 5608532 GACTCAGAGTTCTCTTCGG 57 5608193 5608213 CCACATATCTGTTCCATACGA 57 NA Drosophila melanogaster 61 Uba1 FBgn0023143 FBtr0088499 2 1 1 83 2R 5577412 5577494 CCATCAAGAAAGCTCTGATCG 59 5577349 5577370 ATTGATCCTCCCAATAAAGACG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0088605,FBtr0088604,FBtr0088601,FBtr0112897,FBtr0301511,FBtr0088603,FBtr0088602,FBtr0302602 1 10 10 97 2R 5142522 5142606 CTTCCAGACTGAGCAACAC 58 5142443 5142461 CTCTCGGCTCTAGGAACAC 59 NA Drosophila melanogaster 61 Rad51C FBgn0033389 FBtr0301527 3 1 1 84 2R 5053415 5053433 AGGAATTGTCTCTGTTGCC 57 5053480 5053558 TTGTCCAACTCTTCGATTCC 58 NA Drosophila melanogaster 61 shrb FBgn0086656 FBtr0088623 3 1 1 61 2R 5030597 5030616 TTGACCACGATGAAGAATGC 59 5030497 5030575 TCCACGTCCATATTCTGATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34350 FBgn0085379 FBtr0112560 1 1 1 80 2R 4881534 4881617 CCTGCTCAGGTTCTACGAG 59 4881472 4881492 ATGAAGTTCTCATCGTTGTCG 58 NA Drosophila melanogaster 61 CG8252 FBgn0033344 FBtr0088682 2 1 1 60 2R 4797189 4797210 TCTATTGAAGCATTATCCCGTG 58 4797150 4797169 GTAGAGCGTGTTGTAACCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8746 FBgn0033330 FBtr0088714 3 1 1 60 2R 4680466 4680484 TCTCGGAGTTCCGTATTCC 58 4680506 4680526 AGCTTCTTTCTTTCACGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8584 FBgn0033322 FBtr0088724 3 1 1 60 2R 4589084 4589103 GATTTAGACAAGCTCGCTCC 58 4589043 4589061 TCTGGAGATTGCTGACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beta3GalTII FBgn0033315 FBtr0088728 2 1 1 60 2R 4514522 4514542 TCATGCAGTCCCTGTATATCC 59 4514482 4514502 TCCACTTTCAGCATATACGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hubl FBgn0050364 FBtr0088772 3 1 1 60 2R 4249362 4249380 CTCATGTTGCGTGAGTACC 58 4249320 4249339 GGTCTTCTTGCTTGGATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11210 FBgn0033259 FBtr0088781 3 1 1 92 2R 3987897 3987915 CTATACGTAAGGAACGCCG 57 3987968 3988047 TGGTTTAACCATGAGAGTATCC 57 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 Odc1 FBgn0013307 FBtr0088863 2 1 1 80 2R 3893365 3893385 CTATGACATGGACTTTCTGGA 57 3893426 3893502 ACACTTTCGGCTATCTTCTC 57 NA Drosophila melanogaster 61 CG30380 FBgn0050380 FBtr0088881 1 1 1 60 2R 3826991 3827009 CTTTCGGGACCAGGAAGAG 59 3826949 3826967 AGCACTCGGCTATCTTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or43b FBgn0026393 FBtr0088887 1 1 1 87 2R 3808680 3808698 GTTCCTGCAGAAACTGCAG 59 3808548 3808633 CTTGGCTACATTGATGTTAGTGG 59 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112578,FBtr0112580 1 4 4 82 2R 3724655 3724758 CATTCAGGACTTTGGAGATCG 58 3724593 3724611 GAAGTCCAGTCCTCACCTG 59 NA Drosophila melanogaster 61 Gr43b FBgn0033202 FBtr0088945 3 1 1 100 2R 3547079 3547097 CAGCAACTGTTCGTAATCG 57 3546927 3547016 ATTATCAACGAGGTGTGCTC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111064,FBtr0111093,FBtr0111070,FBtr0111098,FBtr0111087,FBtr0111063,FBtr0089016,FBtr0111072,FBtr0111084,FBtr0111066,FBtr0111053,FBtr0111090,FBtr0111086,FBtr0111058,FBtr0111050,FBtr0111061,FBtr0089020,FBtr0111082,FBtr0111079,FBtr0111076,FBt 3 59 59 80 2R 3210578 3210597 GACAGTCCTCAATCTACACG 57 3210452 3210537 TGTATCGACGATATTGGTCCT 58 NA Drosophila melanogaster 61 CG12831 FBgn0033141 FBtr0300063 2 1 1 80 2R 2960755 2960774 TTTCCTGCACAATCTCTTCG 58 2960637 2960713 CCAACGGAGAAGTTAATGCT 58 NA Drosophila melanogaster 61 ppk25 FBgn0053349 FBtr0086169 2 1 1 80 2R 2838539 2838726 CTACGGCAAACTAGAAACACAG 59 2838767 2838785 GGCTTCAGAGATGTGATGC 58 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302578,FBtr0302034,FBtr0302579,FBtr0302035,FBtr0113470 1 6 6 94 2R 2821425 2821581 TATCACGAAAGAGCTGTCC 57 2821349 2821367 ACATGTTCACATAGGTGGG 57 NA Drosophila melanogaster 61 CG7882 FBgn0033047 FBtr0085965,FBtr0085966 2 2 2 169 2R 1846871 1846955 CTTCATCGGAGCAGAACTG 58 1847088 1847106 ATATCAGGAGGCAGGTCAC 58 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 2 4 4 80 2R 1662571 1662645 TGCATCTCGTTACAGACTCC 59 1662510 1662531 TATATCTTGGGCTGGATACGAG 59 NA Drosophila melanogaster 61 CG1298 FBgn0033032 FBtr0086037 3 1 1 60 2R 1559936 1559957 CTTAAACGAAATCAGCAATCGG 58 1559973 1559996 CTGATTCTGGTAATACTCATCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063 3 3 4 98 2R 1327170 1327188 CAACAACTGGCTATCCTGC 58 1327249 1328123 ATTCATAACGACTCCTTGCG 58 NA Drosophila melanogaster 61 CG10465 FBgn0033017 FBtr0086094 2 1 1 89 2R 1228013 1228080 GACTGATTCGGAAGGATGG 57 1227942 1227960 AATGGAACAGTGCCATCTC 57 NA Drosophila melanogaster 61 TpnC41C FBgn0013348 FBtr0086102 2 1 1 95 2R 954421 954494 GAGCAAACTGCATTACTACGT 59 954346 954366 CATGCTAAGTATCGTACCCAC 58 NA Drosophila melanogaster 61 CR33987 FBgn0053987 FBtr0100032 3 1 1 60 2L 22019435 22019455 CTCGACCTACGACTAAATTGC 59 22019476 22019495 TCGAGGTCTGTTAATTCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 3 2 2 81 2L 9789414 9789432 GCCTCTACTGACAGATGAC 57 9789291 9789371 AACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 3 3 3 81 2L 22818638 22820176 CATTGTGGATCCAATCTCGAC 59 22820218 22820237 AACAACCAATTGCTTTGCAG 58 NA Drosophila melanogaster 61 CG40439 FBgn0058439 FBtr0111233,FBtr0111232 2 2 2 60 2L 22690631 22690650 CATCTTGTGCTATCAGCACG 59 22690590 22690608 AGAACTCCCAATGCTCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1421 FBgn0032966 FBtr0085928 2 1 1 60 2L 21903549 21903569 ACTACAGGAATGGCTATTGTC 57 21903591 21903609 GTTGATCGGAAATGATCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11630 FBgn0032964 FBtr0085909 1 1 1 60 2L 21782663 21782682 GAGTAACAATCGTCGTCTGG 58 21782622 21782641 AGGTAAGTTCTGGAGAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 step FBgn0086779 FBtr0301616,FBtr0301617,FBtr0085910 1 3 3 80 2L 21742826 21742844 TGAGGATGTGCTTAAGGCT 58 21742687 21742783 CACAGAAATTGTCTGAGGGC 59 NA Drosophila melanogaster 61 His3:CG33860 FBgn0053860 FBtr0091864 1 1 1 60 2L 21530076 21530094 CGCTCAGGACTTTAAGACG 58 21530118 21530136 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 1 13 13 80 2L 21289504 21289524 TTATACAGCCCAGTCTTGGTC 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081444,FBtr0081445,FBtr0081443,FBtr0081440,FBtr0301961,FBtr0081447 3 9 9 90 2L 20877211 20877229 CGCTTTGATCAAGTTCTGC 57 20877074 20877157 ATACTGGGTACTCAGTCCC 57 NA Drosophila melanogaster 61 CG14401 FBgn0032900 FBtr0081430 3 1 1 104 2L 20870746 20870835 AGTACCATGAGGGAATGCC 59 20870903 20870921 CAGGATCTGGTCCATCGTC 59 NA Drosophila melanogaster 61 CG1962 FBgn0032876 FBtr0081399 2 1 2 152 2L 20681739 20681758 TATTCGTACATGCAGTTGCG 59 20681521 20681624 CTTGATGCGAACTTTGGCA 59 NA InUTR Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081353,FBtr0081354,FBtr0081352,FBtr0301884 3 5 5 180 2L 20343659 20343748 TCTCCAAGTTTCAGGACGAC 59 20343891 20343909 CAATCTTGTCGTGCCTGAC 59 NA Drosophila melanogaster 61 CG40174 FBgn0058174 FBtr0100564 3 1 1 128 2L 20258193 20258211 GAAGAACATGAGACCCGCT 59 20257979 20258101 ACAAACGATGGCGAAATCC 59 NA Drosophila melanogaster 61 CG40341 FBgn0259996 FBtr0302056 2 1 1 196 2L 20248238 20248257 ACAACAGACAAGAACAACGA 58 20248416 20248514 AAGTCAGTAAGCGACTTGG 57 NA Drosophila melanogaster 61 Nf-YB FBgn0032816 FBtr0081289 2 1 1 117 2L 19736476 19736494 AATCGCAAGACAGTCAACG 58 19736575 19736646 CCGATTTGTTCGACTCTCG 58 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 1 3 3 88 2L 19733219 19733237 AAACGTTTCCGAACTCCTG 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 1 2 2 88 2L 19418408 19418489 GGAAACCCGTACAACTTGAC 59 19418538 19418558 CAATTGACCTTAGTCTGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 Aats-asn FBgn0086443 FBtr0081162 3 1 1 149 2L 19131681 19131810 TGAGTTAACCTTGGGTGCA 59 19131550 19131570 TTGGTGTCTACGTAAATCGTG 58 NA Drosophila melanogaster 61 CG10650 FBgn0046302 FBtr0081183 2 1 1 84 2L 18995650 18995671 TGTTTAACGAGTCCATCTACTC 57 18995007 18995605 CACGAGTTAGAGTTCCTGC 58 NA Drosophila melanogaster 61 CG15169 FBgn0032734 FBtr0081136 3 1 1 60 2L 18991552 18991570 TCAGTGACTCCCGATACTC 57 18991594 18991612 TTGGGTGAGTTTCCAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5693 FBgn0040989 FBtr0081026 2 1 1 141 2L 18006798 18006816 AATCCGGGCTACATTGGAC 59 18006921 18006939 CGTCCTTGTTGGATTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 1 1 1 92 2L 17590721 17590739 CTTCTGTGCGAAAGCTGTC 59 17590793 17590873 GTCTTCTCAACTCCTCGAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31805 FBgn0051805 FBtr0273383 3 1 1 100 2L 16900173 16900192 GAGCCTCAAGGATCTAACCT 58 16900034 16900110 TTAGACTCGCGTCAGAGTC 58 NA Drosophila melanogaster 61 CG17331 FBgn0032596 FBtr0080936 3 1 1 94 2L 16732008 16732028 GACTCTACTGGGTATCAAGGG 59 16731860 16731955 TGTTCTGATCCTCTTTCATCAC 58 NA Drosophila melanogaster 61 Idgf2 FBgn0020415 FBtr0080861 1 1 1 84 2L 16449676 16449695 AAAGGACTCCTTGAGAGCTG 59 16449736 16449819 GGGAATATCAAAGTACCATGTTGAG 60 NA Drosophila melanogaster 61 CG12448 FBgn0028857 FBtr0300613 2 1 1 81 2L 15941997 15942016 CAGAAAGGTCCACAGAATGC 59 15942054 15942140 GATCTTACTTAGCAGATCAGATTCC 59 NA Drosophila melanogaster 61 CG18518 FBgn0028900 FBtr0080814 1 1 1 60 2L 15835356 15835376 GTATTCGTGATGCCAGTTCTC 59 15835316 15835335 ATATTCCGGGCTTTAGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31826 FBgn0051826 FBtr0080762 1 1 1 138 2L 15772567 15772587 CACCTTTGGACGATATTTCGT 58 15772390 15772467 TAGGTCCTCGCATTTCTCC 58 NA InUTR Drosophila melanogaster 61 kek3 FBgn0028370 FBtr0080752,FBtr0300848 1 2 2 80 2L 15555018 15578890 ATTATTGCACAAGACCTGTGG 59 15578928 15578950 CATACTCGGACTAGAATGATTCC 58 NA InUTR Drosophila melanogaster 61 CG31828 FBgn0051828 FBtr0080742 2 1 1 123 2L 15370784 15373081 CCAACAGTGCTGCTATTGC 59 15370679 15370697 AATTTCTCAATGCTCGGCC 58 NA Drosophila melanogaster 61 CG33679 FBgn0053679 FBtr0091659 2 1 1 102 2L 15058606 15058626 TTCTACTATTTCTACACCGCC 57 15058753 15058771 TACGATCATCCAAGGTGCA 58 NA DesignNoJunction Drosophila melanogaster 61 NC2beta FBgn0028926 FBtr0080695 3 1 1 81 2L 15008067 15008090 CTCAGAGTTCATTCATCTGATCAG 59 15008130 15008148 GTGCTCTGCGTTTATCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18125 FBgn0028917 FBtr0080642 2 1 1 60 2L 14346390 14346411 TTGAAGAACTCCAATGGAAGTG 59 14346351 14346369 CTAATCCCTCATGCGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 1 5 5 80 2L 14324567 14324587 CGTAAACATTCACTTGCTTCC 58 14324629 14324703 GTTCCCGAAGTGAAACCTG 58 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942,FBtr0080536 3 2 2 89 2L 13791515 13791533 ATTCGAACCCAAGGAGGAG 59 13791586 13791673 TTTAAGTTGTCATGGCCGG 58 NA Nonspecific Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080530 2 1 2 111 2L 13708887 13708983 GGATTGAAGCATCCAATATCCG 59 13709055 13709073 TCATAGTAGACGACGCCAC 59 NA InUTR Drosophila melanogaster 61 CG15638 FBgn0028943 FBtr0080516 1 1 1 95 2L 13535698 13535716 GGAAACGAAACCCAAGACG 59 13535621 13535639 CTTTGGGTGACCAGATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5705 FBgn0032486 FBtr0080444 1 1 1 60 2L 13220306 13220325 GTACTAGAACGGCACATCAC 59 13220348 13220366 GCATATCCTCGTCCTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15482 FBgn0032483 FBtr0080487 2 1 1 60 2L 13210978 13210996 GAACCAATCCTGCAGTGAG 58 13210936 13210956 ATTCAAGCTGATGAGGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5525 FBgn0032444 FBtr0080411 3 1 1 112 2L 12691494 12691575 CCAAGACCGATATGGATCAC 58 12691401 12691421 TGACTTCTTGATCTGCTTGAC 58 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642,FBtr0112643 2 2 2 191 2L 12623012 12625465 ATCGAATGCTTCCGATTGC 59 12625619 12625638 TACTGATGGTGGTTCAGGTG 59 NA Drosophila melanogaster 61 l(2)01810 FBgn0010497 FBtr0080292 2 1 1 80 2L 12027808 12031898 AAGCCTATCGAGGTATTTCG 57 12031941 12031959 GTGTAGGCATTCAGGATGG 58 NA Drosophila melanogaster 61 cana FBgn0040233 FBtr0091678 2 1 1 60 2L 11270593 11270611 CGAGACCAACATGAACGAG 58 11270630 11270706 CTCAATGATTATCCTGAAGATGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 cana FBgn0040233 FBtr0091678 1 1 1 80 2L 11277188 11277264 GTGCCAAAGAAATCCAGCA 59 11277308 11277326 CTGCTTACGGTTCTCATCG 58 NA Nonspecific Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080138,FBtr0080137 2 2 2 124 2L 10790320 10790338 TTGAAATTAGCCACAGCGA 57 10790474 10790492 CGAAGGAGAACTGAGGTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 UbcD2 FBgn0015320 FBtr0080116,FBtr0080115 3 2 2 80 2L 10766272 10766405 CAGACTGTAATCCAGCCGA 59 10766210 10766228 CAATTCGATCGTGCTCCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6750 FBgn0032292 FBtr0080122 1 1 1 67 2L 10732186 10732204 TCACCCAAATCCAGGACAG 59 10732077 10732095 GAGATACTTGCCGTTCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 2 2 2 80 2L 10446357 10446531 TATGTCAAGGATGACGCTG 57 10446574 10446593 TACGGATTCGTTTAGTGTGG 57 NA Drosophila melanogaster 61 dpr19 FBgn0032233 FBtr0080004 3 1 1 92 2L 10377865 10377886 AACAACACTCGAGTTATTGCAC 59 10377939 10378025 ACGTATCCAGGAAACCGTG 59 NA Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 3 2 2 96 2L 10343339 10343416 GCGAGGAAATAATACTACCGTC 58 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 CG5385 FBgn0032215 FBtr0080062 3 1 1 170 2L 10312031 10312052 AGTAATGATTCAGGAACAGCAG 58 10311768 10311901 ATTTGAGGGTTCACCATCGA 59 NA Drosophila melanogaster 61 CG4957 FBgn0032205 FBtr0079985 3 1 1 80 2L 10269485 10269505 AATGATGCTATAGAGTTGGGC 58 10269545 10269627 TGGACTGCATAGGAAATTGAC 58 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0100236,FBtr0079916,FBtr0079914 3 3 6 196 2L 9825736 9869534 AAGAAAGCTGTCAAGGACCT 59 9815904 9819296 GTTCCACTCCAACGAAAGC 59 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 3 2 2 135 2L 9733521 9742382 TATCAATGACACGCACAACG 59 9733405 9733426 CGCCACAAACATATAGATCACC 59 NA Drosophila melanogaster 61 CG34182 FBgn0085211 FBtr0112375 2 1 1 60 2L 9437058 9437077 AAGATGCAATTCATGCGGAC 59 9437099 9437118 CGAAATCCACGATATCTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31886 FBgn0032079 FBtr0079787 2 1 2 81 2L 8955580 8957534 TAGGGAAGATACAGAATAAACCCG 59 8955522 8955542 CGGCAGTATCACAATCATCAG 59 NA InUTR Drosophila melanogaster 61 CG13088 FBgn0032047 FBtr0079681 2 1 1 80 2L 8490117 8490136 AAAGTTCTGCTAAGTCGCAG 59 8490176 8490252 ATCCCGTAGAACTTTACTAGGA 58 NA Drosophila melanogaster 61 CG13398 FBgn0032042 FBtr0079710 2 1 1 174 2L 8415048 8415066 CTGGGTAGCTGATTTCAGC 58 8414820 8414839 AAACACATTCTCATGACCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31898 FBgn0051898 FBtr0079662 1 1 1 60 2L 8401174 8401192 CTATGCTGAGGAGTTCCGT 58 8401215 8401234 TTTAAGTTGACGCTGATCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0301187 3 1 2 80 2L 8213248 8213345 AGACGATCTCAATATCCTTCGA 58 8213385 8213404 ACTGTACGGACAATAAGCCT 58 NA Drosophila melanogaster 61 Ssb-c31a FBgn0015299 FBtr0079590 1 1 1 100 2L 8211495 8211570 CAGATGATCGTATCAAGCCG 59 8211633 8211651 GGTCCAAGATGTAGCACCA 59 NA Drosophila melanogaster 61 CG31900 FBgn0051900 FBtr0079580 3 1 1 81 2L 8157876 8157895 AAACGGAAACGGTTTACTCC 58 8157935 8158025 AGGCTTAATCTGGTAGGATTCAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567,FBtr0079574 2 9 9 83 2L 8107165 8107248 GGACCTTTGCCAATGTAACG 59 8107294 8107312 GAATGGCGTTAGGAACACC 58 NA Drosophila melanogaster 61 CG7227 FBgn0031970 FBtr0079551 3 1 1 81 2L 7995679 7995763 GGCAAATGGTACTGATAACCC 59 7995618 7995639 TATGTTGAGAAGACCGGATCTC 59 NA Drosophila melanogaster 61 CG5181 FBgn0031909 FBtr0079467 1 1 1 107 2L 7409505 7409586 TGAGGAACTTCAAGGTGGG 59 7409416 7409434 AGCCCTTTGTCAGTCTGAC 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 3 3 3 86 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227332 7228703 GCGTTTAATGGGAACCTGG 59 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 3 3 3 105 2L 7100545 7107149 CACTTCTTCGTGAAGAGCAG 59 7100459 7100477 TCTCCTCGTTGTAGGTCGA 59 NA Drosophila melanogaster 61 CG18304 FBgn0031869 FBtr0079367 3 1 1 80 2L 6934895 6934997 AAGGAACAATTACAGAGCACTG 59 6934836 6934855 CTTCACCTGTTGCTCATAGC 59 NA Drosophila melanogaster 61 CG11070 FBgn0028467 FBtr0079297 1 1 1 81 2L 6659752 6659838 CTCGTTAAAGGTTCTCCTGGT 59 6659880 6659899 TAGCATACTAACGCCCTTCG 59 NA Drosophila melanogaster 61 epsilonCOP FBgn0027496 FBtr0079261 2 1 1 60 2L 6489336 6489356 ACCTATCTTACTTGGCCATCG 59 6489378 6489396 TTTCCCTCCTTGATGTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9498 FBgn0031801 FBtr0079282 2 1 1 138 2L 6350463 6350481 CAGTGACCTCACGGTAGAG 59 6350279 6350362 AATAGCGGGATCCTTCTTGG 59 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 2 2 2 96 2L 6273042 6273060 CGATTTGGAATGGGCACAG 59 6273120 6278690 GTTTGCAGGTTCCGATTGG 59 NA Drosophila melanogaster 61 Ugt37b1 FBgn0026755 FBtr0079242 3 1 1 111 2L 6225752 6225828 GGATCTACAGGGAGATCTATGG 58 6225900 6225918 ATGGGTCCTTCGCTAATCC 59 NA Drosophila melanogaster 61 CG13994 FBgn0031772 FBtr0079188 1 1 1 80 2L 6063216 6063286 GCAAGAAGTCCAAATGCTG 57 6063330 6063348 CACAGTCTTCGTCATCCTC 57 NA Nonspecific Drosophila melanogaster 61 CG31643 FBgn0051643 FBtr0079182 2 1 1 83 2L 6039936 6040021 TCGCAAGAAGCTAAAGAATACG 59 6040063 6040083 CGAGAATTGAGATCGTTGCAG 59 NA Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 2 2 2 84 2L 5993529 5993547 CATCGATCGCCTTAATGCT 58 5993337 5993483 AGTTCGCACCTTATTGATACC 58 NA Drosophila melanogaster 61 Ucp4C FBgn0031757 FBtr0079172 1 1 1 60 2L 5969527 5969545 ACAAGAACTCCCTCGACTG 59 5969569 5969587 TATAACGTGAGGACACCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14007 FBgn0031731 FBtr0113023 1 1 1 80 2L 5716268 5716288 GCATTTGTCCACGTAATATCC 57 5716148 5716228 CCATTTCCGTAACTTAATGGC 57 NA Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079050 3 1 2 82 2L 4970771 4971097 GGAAACACCAGAATATGATTAAGGG 60 4970713 4970733 TTTGGGTGAAATTATGGAGGC 59 NA Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 2 2 2 66 2L 4954370 4954388 GGATTCACCCGTGTTACCA 59 4954322 4954341 CTTAGTAGTAAGCAACGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15625 FBgn0031644 FBtr0077390 2 1 1 80 2L 4890296 4890315 CCTTCGATATTCGAATGGGA 57 4890356 4890437 GAAAGTGTTCATGTACTGTGG 57 NA Drosophila melanogaster 61 CG15629 FBgn0031630 FBtr0077383 1 1 1 80 2L 4813502 4814781 AGTTAAAGGACATCTCCGGC 60 4814821 4814842 CAAAGTTTAGGGCAATCAAACG 59 NA Drosophila melanogaster 61 RpL27A FBgn0010410 FBtr0077452 1 1 1 87 2L 4457497 4457748 GTTAAATTCGGCTACTACAAGC 57 4457431 4457452 CCTTCTTAGAGAAGTACTTGGC 58 NA Drosophila melanogaster 61 Sr-CI FBgn0014033 FBtr0077467 1 1 1 110 2L 4122571 4122714 GGTTCAGAGCCAATTGCAG 59 4122785 4122806 TGAATATCACCTGGAAGTCCTC 59 NA Drosophila melanogaster 61 CG31773 FBgn0051773 FBtr0077509 1 1 1 60 2L 3912060 3912080 AACTCGCAACTTTCCATATCC 58 3912020 3912038 TGCCGTACTTATTGGTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 2 3 3 164 2L 3870399 3870417 CAACAACCTGAACTGCCAG 59 3870542 3870630 CCGAGTTGTTCGATATACTCCT 59 NA Drosophila melanogaster 61 CG3407 FBgn0031573 FBtr0077515 1 1 1 86 2L 3811500 3811583 CACGAAAGGACACATTCCG 59 3811432 3811450 GTGGTACTTCAGGTCACCC 59 NA Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 3 3 3 92 2L 3722559 3722659 CTTTGAAATATTGGTGCGCT 57 3722713 3722732 CTAAGCGTCGCTATGTAGTC 58 NA Drosophila melanogaster 61 CG3604 FBgn0031562 FBtr0077545 2 1 1 60 2L 3697475 3697496 GAACAACTTCGAATCCAAGGAG 59 3697436 3697454 GGAAACCGCAGACTTTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31950 FBgn0051950 FBtr0077630 2 1 1 69 2L 2878690 2878708 TGAACGATGCCAGTTTGAC 58 2878741 2878759 ACGATCCGAAGAACTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32463 FBgn0052463 FBtr0077808 1 1 1 83 2L 2239221 2239239 CAAACGGATCCCTATGCCT 59 2239093 2239114 GTGATCGTCTTCATTATTGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077848 3 1 2 121 2L 2191942 2191960 TGACCTATGTGAATGAGCG 57 2191068 2191859 CTCATCACGATCTTTCAGGAG 58 NA Drosophila melanogaster 61 CR34311 FBgn0085340 FBtr0112509 2 1 1 148 X 20254909 20254928 GAATAAGTCTGCCCAGACTG 58 20254724 20254798 TTGAGTTCAGTATTCCGCG 58 NA Drosophila melanogaster 61 CG15345 FBgn0040928 FBtr0071176 3 1 1 176 X 8292173 8292249 TGACAAAGTCGAGAATTTGC 57 8292016 8292034 CAGACAAATGGTTTCGGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mlc-c FBgn0004687 FBtr0070783 2 1 1 126 X 5514309 5516292 GTTGGCTGAATTCCAGGAG 58 5514201 5514219 CTTCTTGACATCCGACTCG 58 NA Drosophila melanogaster 61 CG14634 FBgn0040892 FBtr0110804 2 1 1 82 X 756958 756976 TCAACCAGGTGACCATCAG 59 757022 757040 AGACGTGACTATTCGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sc FBgn0004170 FBtr0070073 2 1 1 60 X 291055 291073 CACCTACGAAGGAGTTCCC 59 291097 291115 GTCCAGATGATCCAGACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582,FBtr0114583,FBtr0112577 2 5 5 186 3R 5756092 5756110 ATTGAGCTGAAGAAGCGAC 58 5756260 5769213 GTTTCCGGGAATTGTGCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG32085 FBgn0052085 FBtr0076133 3 1 1 93 3L 11667432 11667450 CATCCAAGCATGTCCACTC 58 11661695 11667376 TCAAACAAACTCTGCAGGTG 59 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0110858,FBtr0089864,FBtr0110856 2 4 4 91 3L 2137391 2137409 AGATCAACAACCAGAGCGT 59 2136049 2137336 CTCGAGCAGCTCTATGGTC 59 NA Drosophila melanogaster 61 PebII FBgn0011694 FBtr0072455 2 1 1 86 2R 21061698 21061719 GTTCAGTTTACAGCATGATTCG 58 21061578 21061598 GTTGCTCGATAGAACAAAGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 spag FBgn0015544 FBtr0072256 1 1 1 80 2R 20048323 20048341 GTCAATACCGTGCAAACTG 57 20048384 20048460 TAAGAAGCGCTCTATTGGAC 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 12 13 82 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566008 19566084 GCATGTCGATGAAGCTCTC 58 NA Drosophila melanogaster 61 dgt3 FBgn0034569 FBtr0273414 1 1 1 83 2R 16880215 16880292 CAACTGGCAGAACTCAAGC 59 16880150 16880168 GTTCTCAAACATGGGCTGC 59 NA Drosophila melanogaster 61 AttA FBgn0012042 FBtr0087437 2 1 1 127 2R 10635040 10635058 CGTTTGGATCTGACCAAGG 58 10635149 10635231 TGACCAGCATTGTTGTAGG 57 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 2 5 5 82 2R 9436513 9436532 TTATGGTGACTCCCATCTGC 59 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0086012,FBtr0086008,FBtr0086010,FBtr0302439,FBtr0086009 2 6 6 80 2R 1981451 1981531 ATCTCAGGCGTATAATGAGTC 57 1981391 1981411 TGGTTATCTCGGTTATATGCC 57 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187,FBtr0081188 3 3 3 107 2L 18963251 18963269 GGAATCCGTTCGAAGAGGA 59 18963107 18963181 CTGTGATGCTTCCTTGACTG 59 NA Drosophila melanogaster 61 CG5755 FBgn0032664 FBtr0081033 2 1 1 60 2L 18097198 18097216 ATCGAAACTCAGCAGTTGG 58 18097240 18097258 GCCAAATCGCTTTAAGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0100316,FBtr0100313,FBtr0081018,FBtr0081020,FBtr0100314,FBtr0081019,FBtr0100315,FBtr0081016,FBtr0081017,FBtr0081013,FBtr0081015 2 12 12 80 2L 17664139 17664158 ATTGATCCGGATAATCCAGC 57 17662271 17664097 ATCCAGAGGCTTTAGTACGA 58 NA Drosophila melanogaster 61 CG12404 FBgn0032465 FBtr0080430 1 1 1 80 2L 12994232 12997476 TTTAATCACCATTCAGGGCAC 59 12994172 12994190 AGTTTCGAGGCCGATATGG 59 NA Drosophila melanogaster 61 pim FBgn0003087 FBtr0080001 2 1 1 81 2L 10363131 10363214 CATTAATTTGCCAGCGAATCC 58 10363255 10363275 ATTGTCAAGGTTACCAAGAGG 58 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 2 2 2 183 2L 6008499 6008769 CTGTGCATGCAACAGATCC 59 6008334 6008353 CGATCAGTAGTGCATACAGC 58 NA Drosophila melanogaster 61 CG15630 FBgn0031627 FBtr0077418 1 1 1 112 2L 4737139 4737158 GTAACACAGAATGACACCGG 59 4736328 4737064 CAAATGGGCTTGTGTTCGA 59 NA Drosophila melanogaster 61 Pkg21D FBgn0000442 FBtr0078042 2 1 1 95 2L 788167 788250 GGATTTCAGTGATAAGCAGCA 58 788092 788110 GAATCTACCAGTTCCCGCA 59 NA Drosophila melanogaster 61 CG13946 FBgn0040725 FBtr0078004 2 1 1 74 2L 776751 776769 GAATGGAACCGAACTCTCC 58 776807 776825 TCAGTGGTGCTGGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ssp5 FBgn0037985 FBtr0082538 1 1 1 60 3R 7859303 7859322 AGATGACCATGAGGGAACTG 59 7859344 7859363 TTCTTATTCAGCCGTTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088035 3 1 2 98 2R 7779676 7781067 CAGCTTATTCGAGACCATAGTG 58 7781126 7781144 GTCGACTTACCGGAATCGA 59 NA InUTR Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 1 1 1 60 2R 12666131 12666149 AGTAAATGCTCCCAACGGA 59 12666172 12666246 AGAGCTCAAGAAGTACAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG11200 FBgn0034500 FBtr0086300,FBtr0086299 3 2 2 80 2R 16193964 16193983 TATCAGTACCTGGGAATCGT 57 16193840 16193923 CGGTTGTTTATAAAGTGCCAC 58 NA Drosophila melanogaster 61 CG4911 FBgn0035959 FBtr0076542 3 1 1 101 3L 9064610 9064690 ATCGAACAATGCTTTGTGGA 58 9064528 9064546 ATAGTATGAGAGGGCCTCG 57 NA Drosophila melanogaster 61 Rab40 FBgn0030391 FBtr0073668,FBtr0073669 3 2 2 150 X 12354610 12355033 GCAGCAATAAGGTGCTGTC 59 12354478 12354496 GAATTGAAGCACTGGGACG 59 NA Drosophila melanogaster 61 CG40282 FBgn0039979 FBtr0111272 1 1 1 108 2R 618661 619010 AATTCAAATCTGCTGGCCA 58 618571 618590 TGATTTCCTTGACCATGGAC 57 NA Nonspecific Drosophila melanogaster 61 Ced-12 FBgn0032409 FBtr0080330 2 1 1 91 2L 12099897 12099917 GCGATTGTTAAGCTCAAAGAG 58 12099969 12100051 AAATGTGTACCTTCCACCAG 57 NA Drosophila melanogaster 61 CG14234 FBgn0031065 FBtr0074790 2 1 1 91 X 19631540 19631558 TCTCACCTCCAGCATTGTG 59 19631611 19631744 TGCCGATTATCCAATTGATGG 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071209,FBtr0301762,FBtr0071208,FBtr0301764,FBtr0071207 2 6 6 81 X 8426429 8426450 GCAACAGAATAAGGAAAGTGAC 58 8426489 8438895 GATCCAACTATATTCTGGCTCG 58 NA Drosophila melanogaster 61 Lcp65APsi FBgn0020646 FBtr0076993 3 1 1 83 3L 6141086 6141439 TTTAGGGCTACTACTTCCGAC 59 6141484 6141502 AACAATCTCTGCATCCGGA 59 NA Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705,FBtr0072704,FBtr0072703 1 3 3 80 3L 1533796 1533869 AACAAATCCTACGATGCGG 58 1533734 1533754 GTAAATTTCTACCACATCGCC 57 NA Drosophila melanogaster 61 CG31178 FBgn0064912 FBtr0084138 3 1 2 60 3R 17699967 17700051 TGATGCGAATAGCAATGCC 59 17700073 17700093 CGATTGATAGTGGATAACGCC 59 NA DesignRelaxed Drosophila melanogaster 61 mRpS17 FBgn0034986 FBtr0072277 2 1 1 94 2R 20061856 20061874 TCCTACTAATGGGCCAGTG 58 20061716 20061803 GTACATATTCAGGTTCTTGTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 1 1 1 90 2R 3954902 3954920 TTTCCCGTGTATGATCCCG 59 3954781 3954849 GCGGTGAATAATATGAGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 ifc FBgn0001941 FBtr0079179 1 1 1 93 2L 5986813 5986831 ATCTTGGGCTTCATCTGCA 59 5986888 5987629 CATCACCTTGGTAACGGTG 58 NA Drosophila melanogaster 61 pen FBgn0015527 FBtr0077223 3 1 1 119 X 21218447 21218565 TAATCACATTCAAGGCGAGTC 58 21218348 21218366 TTCTTCTTATCCTGCGGCT 58 NA Drosophila melanogaster 61 CG9578 FBgn0031094 FBtr0070008 1 1 1 103 X 20064387 20064465 CATGGAGGAGTGCTTTGTG 58 20064532 20064550 AGCTGCTCTTCAGGATGTG 59 NA Drosophila melanogaster 61 CG5162 FBgn0030828 FBtr0074393 3 1 1 81 X 17110014 17110396 GATGTCAACTTTGTGGCGG 59 17110438 17110459 CAATCTCCTCCGTATTGAAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074381 2 1 2 215 X 16973031 16973108 ATTTGGCAAAGCTATGCGA 58 16973287 16973305 CTATCAAATCGGGACTGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 3 2 2 107 X 16312124 16312143 TTGATCCGTGTGATCATCAC 58 16311920 16311998 AGTATCGCCCTTGATCCAG 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 3 4 4 80 X 16188807 16188827 ACAAATCTGAAGGAAGACTGC 58 16188677 16188765 GATAGGTGTACCTGGTGGA 57 NA Drosophila melanogaster 61 CG1434 FBgn0030554 FBtr0073903 2 1 1 100 X 14133630 14133717 ATCCCAGTGATAATCATCTGC 57 14133779 14133797 CAATTTGTCACACTGCTGC 58 NA Drosophila melanogaster 61 Rbp1-like FBgn0030479 FBtr0073790 3 1 1 164 X 13278469 13278487 GTCGAAATGTCATCAGGCC 59 13275067 13278342 TGAGCGTGATCTATAGCGTC 59 NA Drosophila melanogaster 61 CG4332 FBgn0030456 FBtr0073726 1 1 1 97 X 13049934 13049954 CTACCAAGGATATTGACGAGG 57 13050012 13050110 GAAGAGCATATGGATGCTGG 58 NA Drosophila melanogaster 61 CG1597 FBgn0030289 FBtr0290227 2 1 1 148 X 11240370 11240390 TTCTTACGCTCAAGAAACTGC 59 11240176 11240195 ATATGTGCCCAACACTTCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34348 FBgn0085377 FBtr0112557 3 1 1 83 X 11237871 11237891 GTCAAGTTTCGGACGTATCTG 59 11237936 11238017 CGTAGCCACCTTGATTTGC 59 NA Drosophila melanogaster 61 CG34450 FBgn0085479 FBtr0112756 1 1 1 61 X 9223971 9223989 ACTATTGCTGAGACAGCCG 59 9223928 9223946 AAGACTCCCTTTCGATCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mei-P26 FBgn0026206 FBtr0071303 3 1 1 80 X 9064184 9064202 AGGAGGGAGAATTGGTTCG 59 9064244 9064345 AATCGTTGTCTCGTATAGCGA 59 NA Drosophila melanogaster 61 PIP82 FBgn0024943 FBtr0071235 2 1 1 90 X 8419944 8419962 AAATCCTGCAGCATCAACG 59 8419797 8419891 TAGCTATTCTCTTCGTCGCT 58 NA Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221,FBtr0300222 1 2 2 61 X 5577472 5577491 GGAATAGTCCCAGCTTTGAG 58 5577515 5577533 CTTGGTCACATGCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fd3F FBgn0061173 FBtr0070602 3 1 1 80 X 3698341 3703461 TACCAATGGATATCCGATCGT 58 3703500 3703521 CGATAGATTATGTCGAACGGAG 58 NA Drosophila melanogaster 61 usp FBgn0003964 FBtr0070346 2 1 1 60 X 1934253 1934273 GTTCTGATGACTTCATGACCA 58 1934213 1934231 TCTATGATGCGCTCGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL16 FBgn0023519 FBtr0070314 1 1 1 105 X 1784398 1784417 GTCTCCCAGCTCTTTAAGCA 59 1784561 1784654 GCTCCACATTCTGGTATTTAATAGG 59 NA Drosophila melanogaster 61 CR41583 FBgn0085805 FBtr0114259 2 1 1 63 U 6961727 6961745 CATTAGCCAACGTATGCCC 59 6961682 6961700 ATTACTATGCACGCGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42410 FBgn0259841 FBtr0300140 1 1 1 60 U 6275659 6275677 CAAAGCGCTTAACTTGCAG 58 6275617 6275637 GAAAGTGGCGATTAAGTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 2 5 5 81 4 1230678 1230696 CACCAAGTAGCTCAAGTGG 58 1230563 1230634 CTATTCTGCCCTGTAACTGG 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3305a FBgn0082976 FBtr0113588 2 1 1 60 3R 24427491 24427509 ATTAAAGCGTCGGCTAAGC 58 24427532 24427551 TGTTACACTGAATAGGCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3091a FBgn0082979 FBtr0113579 2 1 1 71 3R 1422493 1422514 TTCTGGTACGTAATTGCAAGAG 58 1422443 1422461 ACGTTGTTCAGTGAATGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon99Ci FBgn0003358 FBtr0085511 1 1 1 86 3R 25751669 25751687 CGGATCCATAATCGGACAC 57 25751544 25751562 ACGGCACCATAGTACAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085444,FBtr0085443,FBtr0085445 1 5 5 80 3R 25422997 25423015 GGATCTGCTGAAGTGTCTG 58 25423056 25423149 ACGTGATATTTGGACTGTAGAC 58 NA Drosophila melanogaster 61 CG14511 FBgn0039641 FBtr0085412 2 1 1 60 3R 24972193 24972211 CTGATCTCCAACATGTGCC 58 24972151 24972170 ACTGACTCAACCGGTAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14511 FBgn0039641 FBtr0085412 1 1 1 60 3R 24972233 24972253 AAAGTTCCAATGACACTGCAC 59 24972193 24972211 GGCACATGTTGGAGATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301839,FBtr0301838,FBtr0301837,FBtr0300337 2 4 4 83 3R 24347134 24347153 ATTCCGGAAAGTACACTTGC 58 24347012 24347091 GTACAACAGATTGAATGGACAC 57 NA Drosophila melanogaster 61 CG31053 FBgn0051053 FBtr0085268 2 1 1 60 3R 23753577 23753595 GATTCTATCGCCAGATGCA 57 23753535 23753553 TTGCAGAAGCCCTTTAAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125,FBtr0085126,FBtr0085124 3 3 3 80 3R 23058587 23058664 CATCTAAACGCCACTGTGG 58 23058525 23058545 CAAATCCTCTTTCATCAGGGC 59 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 3 3 3 82 3R 21904394 21904538 AGTACTCAACGATCGAGAGG 58 21904331 21904349 ACTGGATCTTCGACTGGAC 58 NA Drosophila melanogaster 61 E(spl) FBgn0000591 FBtr0084961 3 1 1 72 3R 21866398 21866417 GCGTCTACAAGAACTTGCAG 59 21866452 21866470 CAGTCCATCGAGTTCTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmdelta FBgn0002734 FBtr0084954 2 1 1 60 3R 21823797 21823815 ATCTCAAATTCGGCACCCA 59 21823838 21823857 TGTTTCATGTCCTTGAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42261 FBgn0259146 FBtr0299575 2 1 1 80 3R 21803791 21803876 GCCATTCAGAAACTAGCCC 58 21803920 21803938 GCTGTCGTTCTTGGTATCC 58 NA Drosophila melanogaster 61 alpha4GT2 FBgn0039378 FBtr0300129 1 1 1 142 3R 21658333 21658351 CTCTGTGGTCCAATTGACG 58 21658457 21667604 TATGCAAAGCCCTGATCAG 57 NA Drosophila melanogaster 61 CG5079 FBgn0039346 FBtr0084883 1 1 1 60 3R 21439932 21439952 AAAGACCAAACTTCAGACAGC 59 21439971 21439992 TTTACTCTCACTCTTGGGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 OstStt3 FBgn0011336 FBtr0084786 1 1 1 80 3R 20893050 20893124 ATTGAAGTTGGACTACAGAGGT 59 20892991 20893012 GTCAGATCGAAGTCCTTATTCC 58 NA Drosophila melanogaster 61 CG13627 FBgn0039217 FBtr0084686 1 1 2 98 3R 20538736 20538758 CTTTCTACAGTCTACCAGATCCA 59 20538816 20540786 GAACAGCAGAAATGGCCTC 59 NA InUTR Drosophila melanogaster 61 CG33339 FBgn0053339 FBtr0084610 3 1 1 116 3R 20188584 20188665 GAATTGTGCTGACAGTTCCC 59 20188740 20188762 GGAAGTCTAGAACATTGTAGGGA 59 NA Drosophila melanogaster 61 CG10232 FBgn0039108 FBtr0084471 3 1 1 96 3R 19545729 19545749 TCGAGTATTTCAATGTCCACG 58 19545589 19545671 TGGGTATATCGAACTGGCG 59 NA Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483,FBtr0084259 3 2 2 65 3R 18319265 18319283 CGTTGTCCTCTCGATTCTC 57 18319312 18319330 CATCCTTGCTGTCGTACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3353 FBgn0038869 FBtr0084108 1 1 1 96 3R 17043559 17043577 AAGGTGTCCGATCTACCAC 58 17043422 17043499 ATTCGCCAGCAAATTCTCC 58 NA Drosophila melanogaster 61 cdm FBgn0261532 FBtr0083619 1 1 1 173 3R 14006605 14006624 AGGAGATCGATGTCCTAGAG 57 14006332 14006409 AGAACATAACAATGGCCGT 57 NA Drosophila melanogaster 61 CG14316 FBgn0038567 FBtr0083546 1 1 1 130 3R 13979074 13979092 TTGTTGCTCAGAATTGCGA 58 13979239 13979257 ATCACAATGTCCTCCGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411,FBtr0300610 1 2 2 185 3R 13065431 13065449 CCAAGGTCTTTCAGTTCCC 58 13064754 13065203 GCTTCTCCGGAAATTCCAC 58 NA Drosophila melanogaster 61 Hmt-1 FBgn0038376 FBtr0083188 1 1 1 80 3R 11681651 11681734 TATCGCAAGAAGTTGGTTGAC 59 11681591 11681611 CAATGCCACATAGATCAGCAC 59 NA Drosophila melanogaster 61 pxb FBgn0053207 FBtr0083162 2 1 2 105 3R 11497895 11504868 CAATGCCGATCTTGGATGC 59 11504933 11504955 GACGAGATGAGAACAATCAAGAC 59 NA Drosophila melanogaster 61 GstD5 FBgn0010041 FBtr0082572 3 1 1 60 3R 8201842 8201860 AAAGCCCGGATCTGATGAG 59 8201880 8201902 GATATTCAGATACTCGAAGGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GstD5 FBgn0010041 FBtr0082572 2 1 1 60 3R 8201581 8201599 CACCTTGGAGAAGGATCAG 57 8201621 8201641 AATGGTGTGCTATGGATTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6567 FBgn0037842 FBtr0113217 3 1 1 136 3R 6679473 6679494 CATTTCATCCATTGAGGAACAC 58 6679297 6679379 GTTTCATGCCAAATACACTCAG 58 NA InUTR Drosophila melanogaster 61 CG42489 FBgn0259992 FBtr0300441 1 1 1 60 3R 4479686 4479706 ATCGAACTACAGTGGATCTGG 59 4479646 4479664 TTCCTCAGGTACTGCTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7994 FBgn0037599 FBtr0081875 2 1 1 112 3R 4417644 4418101 CCGGAACAGAGTGGAAGAG 59 4418176 4418195 TTAAATGCAACTCGTGCCTC 59 NA Drosophila melanogaster 61 CG34127 FBgn0083963 FBtr0301072 3 1 1 83 3R 3400133 3401856 TCCAATTAATATCCGGGACGA 58 3400070 3400088 TGCAAATCCACCGTTTGAG 59 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 2 2 3 81 3R 2888222 2888306 TGCCAGGAAGGTACTTGTG 59 2888351 2888369 GCTTCTCCAGGTCTTCCAG 59 NA Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 1 1 1 127 3R 1936187 1936697 TTCCTGATCTGCAGTCAGG 59 1936078 1936096 GATGAATACCGTTCCAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG2931 FBgn0037342 FBtr0078753 2 1 1 60 3R 1393519 1393537 GCAAGAGCAAGGGATTTGG 59 1393477 1393495 ATGGCCCGTATAAAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14668 FBgn0037320 FBtr0078801 1 1 1 60 3R 1213033 1213051 GTCAAGTGCTTCATGTCGG 59 1212991 1213009 GCTTGGAGATAGCCTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 2 14 19 80 3R 1121919 1121937 AAGAAGACTCCAAGGAGCT 57 1121674 1121877 ACCCTATTTCTGCATCTAAGC 57 NA Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620,FBtr0300619 1 2 2 60 3L 22980829 22980848 ACACCGAAAGAACTTCACTC 58 22980871 22980889 ACTTGGACCTTAGAGCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14459 FBgn0037171 FBtr0113185 1 1 1 86 3L 22576158 22576176 CTCCAACGGCAACAATGAG 59 22575181 22576114 CATACACAGAGACCGTTATTATGAG 59 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 2 2 2 83 3L 17746409 17746577 TTGTTCCCACGCTATATGAC 57 17746345 17746363 ACTTCTCCAAGGTTTCCAC 57 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 1 2 2 80 3L 16392188 16392277 GAGTCCGAAGTTACAGAACTC 58 16392128 16392147 GATTCTCATCCGGGAAATCG 58 NA Drosophila melanogaster 61 CG6876 FBgn0036487 FBtr0075642 2 1 1 196 3L 15153549 15153626 TTCGGAGACATCGAAGAGG 58 15153786 15153804 GAGATTTGGCGTTTGACCG 59 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 1 2 2 80 3L 15060073 15060616 AATTACTCAGCAGAGAAGTCC 57 15060013 15060031 AGATTTGAGTTGGGTCCAG 57 NA Drosophila melanogaster 61 CG13481 FBgn0036421 FBtr0113170 3 1 1 60 3L 14362388 14362408 CATTACCTGTTCGATTTGCCT 59 14362348 14362366 AGAGACCACTCGATGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8833 FBgn0036386 FBtr0075792 2 1 1 88 3L 13920553 13920572 CAAACTGAACTAGCCAAGGA 57 13920426 13920502 ATAGCAGAAGGCAAGTCCT 58 NA Drosophila melanogaster 61 CG33263 FBgn0053263 FBtr0075859 1 1 1 60 3L 13416670 13416689 GGCTATCTGACCATTGTGAG 58 13416629 13416649 ATTGCTTTGTAGGAAAGTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32102 FBgn0052102 FBtr0075978 1 1 1 194 3L 12462686 12462873 TCATTATCGCCAGCTTCCA 59 12462510 12462529 ACTAAACTACACATGGCGTG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 3 3 3 89 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152460 11152478 TGTGGTAGACCATCCAGTG 58 NA Drosophila melanogaster 61 CG32050 FBgn0052050 FBtr0076338 2 1 1 60 3L 9819327 9819347 TATATGGAGAATGCCAAGCAG 58 9819368 9819387 GAGTTGATACTGGTGTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nwk FBgn0035966 FBtr0076532 1 1 1 81 3L 9131790 9131884 CGCGTAAGGGAAACTATGTG 59 9131927 9131946 TCATGCTGATTCTTCAGCTG 58 NA Drosophila melanogaster 61 CG13670 FBgn0035873 FBtr0076708 3 1 1 92 3L 8314253 8314271 CTATGGAGTCGAGGATGGC 59 8314327 8314903 TCGACTACGCTGTACACTC 58 NA Drosophila melanogaster 61 CG8563 FBgn0035777 FBtr0076852 1 1 1 80 3L 7387361 7387848 ACACAACGGATCGTTTCTG 58 7387891 7387910 AGTTACGATTGATGTCCACG 58 NA Drosophila melanogaster 61 BBS1 FBgn0035741 FBtr0076912 2 1 1 80 3L 7120372 7120391 GGATAAGCCCAAGAAGAGCT 59 7120431 7120534 AAACTTCCGTAGGTTGATTTGG 59 NA Drosophila melanogaster 61 CG10064 FBgn0035724 FBtr0076937 1 1 1 80 3L 6959185 6959206 GGATATCAACTATCTCGACACC 58 6959063 6959144 GTCATGCGTTTAATGTCCC 57 NA Drosophila melanogaster 61 CG13704 FBgn0035583 FBtr0073353 3 1 1 90 3L 4900352 4900424 GATACTTCACTGGCCTTGC 59 4900478 4900496 ATGAAGTAGAGGGCTCCAC 59 NA Drosophila melanogaster 61 CG11583 FBgn0035524 FBtr0073242 3 1 1 126 3L 4282620 4282638 GATCGTCAGATGATGTGGT 57 4282451 4282472 GGCATTAGGGTCTTAATATCCT 57 NA DesignNoJunction Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073178 2 1 3 121 3L 3902597 3902616 GAAAGTAAAGCGCAATCAGC 58 3901739 3901758 AGTCTTCACAAAGATCTGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14952 FBgn0035377 FBtr0073013 3 1 1 82 3L 2847720 2847738 AGAGCTTACAAACAGCTCG 57 2847656 2847674 CTTGCAACTCTTGGTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14952 FBgn0035377 FBtr0073013 2 1 1 82 3L 2847719 2847738 AGAGCTTACAAACAGCTCGT 59 2847656 2847674 CTTGCAACTCTTGGTGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mkp FBgn0083992 FBtr0110977 2 1 2 60 3L 183689 183765 TTTCTGCAATCTTCTAGCTTCG 59 183650 183668 CGATAAACATTCGAGCTGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Lcp1Psi FBgn0011812 FBtr0088762 1 1 1 73 2R 4320860 4320878 GAGTAACGGCAGGATACGA 59 4320762 4320780 TTTCGAAACGTCCTACGGA 59 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33396 FBgn0053396 FBtr0086388 1 1 1 60 2R 15637850 15637868 ATACATCGGTTCTCGTCCG 59 15637808 15637826 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33445 FBgn0053445 FBtr0086437 1 1 1 60 2R 15619769 15619787 ATACATCGGTTCTCGTCCG 59 15619727 15619745 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mAcR-60C FBgn0000037 FBtr0072368 2 1 2 81 2R 20270758 20270778 GCCTTCTGATTTAGGGTATGC 58 20269364 20270715 GTTCATCGAGGTGCATCTG 58 NA Drosophila melanogaster 61 l(2)06496 FBgn0010622 FBtr0071985 1 1 1 60 2R 18949512 18949530 CTTGGACCAGGTAGAGGAG 58 18949470 18949489 CACATCCTTGCTCAACTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42497 FBgn0260223 FBtr0300626 2 1 1 60 2R 17578503 17578592 GAATCGCTGTCTGTTGGAC 58 17578461 17578479 TTTGACAGCACAAATGCGT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4286 FBgn0034601 FBtr0071627 1 1 1 80 2R 17065633 17065714 TGGTTCTCGAAGAGCTAACC 59 17065572 17065591 TCTCTTCATCGAAGTACGGC 59 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 2 4 4 90 2R 16557769 16557787 CGATAAAGTTGAGCTGCCG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 3 2 2 104 2R 16502088 16502106 TTCTTCCATTCCGGTTGCT 59 16500968 16502023 GCAATAGACCTCTTTGTCATCC 59 NA Drosophila melanogaster 61 Obp56e FBgn0034471 FBtr0086327 2 1 1 98 2R 15599929 15599948 CTTGCAGCTCTATCTTTGGC 59 15600065 15600083 GATTCCCTCCTGTTTGACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15115 FBgn0034413 FBtr0086597 1 1 1 72 2R 14923494 14923512 AATATTCGTTGTACCGCGT 57 14923373 14923391 TAAATCATCGCCAGCAGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 3 2 2 81 2R 14865373 14865393 ACGCCAATTCGCTATATTCTC 58 14865433 14865529 GGATTGAGACGGAAATATTCGG 59 NA Drosophila melanogaster 61 CG5267 FBgn0034154 FBtr0087021 1 1 1 60 2R 12642915 12642937 CAATAGGTGAAGAAATAGCCCTC 59 12642954 12642975 TGCTTGATATACTTCTCCTCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7747 FBgn0034109 FBtr0087179 3 1 1 97 2R 12180221 12180299 TGGCTCTCAGTTCTTTATCAC 57 12180144 12180165 TTTGAAGAGTGTCTAATCCTCC 57 NA Drosophila melanogaster 61 CG33017 FBgn0053017 FBtr0087135 2 1 1 156 2R 12160132 12160213 TTGGGAAACTTGGAGGAGG 59 12160328 12160351 GCTCTAGAATCATCTTGTAGAAGG 58 NA Drosophila melanogaster 61 CG7798 FBgn0034092 FBtr0087192 3 1 1 60 2R 12109785 12109805 GCGAAGTACATCAGGAAACAG 59 12109745 12109764 GACATCGATTGTTCCAAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 1 1 1 167 2R 10840073 10840609 CAGCTGGATAGTCCACAGG 59 10839924 10839942 ATGACTGTGACTGTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpS23 FBgn0033912 FBtr0087575 3 1 1 100 2R 10103604 10104043 AAATTATGGGCAAGCCAAGAG 59 10103524 10103545 CAAATGAGCCTTCTTGTAGTCC 59 NA InUTR Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 2 3 3 138 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854369 9854387 AGTTTGAAGCTCACCTTGC 58 NA Drosophila melanogaster 61 IM10 FBgn0033835 FBtr0087654,FBtr0087655 3 2 2 60 2R 9294853 9294873 CGTTTGTTAACCGAAAGAACG 58 9294954 9294972 AAATTGGGACCACTGATGG 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 AQP FBgn0033807 FBtr0300286,FBtr0087766 3 2 2 89 2R 9101426 9101932 AATTGCGAAGACATGTCGAC 59 9101356 9101374 GATCACACGGGCAATTTGG 59 NA InUTR Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860,FBtr0087858,FBtr0087859 3 3 3 62 2R 8647460 8647479 ATATCGAGCTGGTCATCACG 59 8647417 8647435 TCTTCAGAGCCTTGATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6g1 FBgn0025454 FBtr0087992 3 1 1 80 2R 8075259 8075341 CATCATGATCCAAAGTACTGGAC 59 8075380 8075399 CACTATGTTCTTGCGGTTCG 59 NA Drosophila melanogaster 61 CG13220 FBgn0033608 FBtr0088116 2 1 1 60 2R 7172174 7172192 AAGAAGGACCTGACGAACG 59 7172216 7172234 AAATGTAGAAGGCACTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1698 FBgn0033443 FBtr0088474 1 1 1 80 2R 5684454 5684524 AACATTTACAGGGATGCCA 57 5684566 5684586 AATCCCGAAGATAATCACACC 58 NA Drosophila melanogaster 61 l(2)03659 FBgn0010549 FBtr0302504 3 1 1 80 2R 5279182 5279263 TATCAGGAGATTGGAATCTCCG 59 5279299 5279322 CGTACCCAGATACATTTGTATTGG 59 NA Drosophila melanogaster 61 RagC FBgn0033272 FBtr0088807 1 1 1 80 2R 4049841 4049861 GTCGATATGCAGACGTATGAG 58 4049720 4049800 TTCTTCGGAGCTGTATATGC 57 NA Drosophila melanogaster 61 p47 FBgn0033179 FBtr0088997 1 1 1 95 2R 3352767 3352846 TTCATACAAACTGCACGCC 59 3352690 3352708 GATGGTGGAATTGTCGTCG 59 NA Nonspecific Drosophila melanogaster 61 CG15237 FBgn0033104 FBtr0086212 2 1 1 93 2R 2697135 2697153 CTACTGGTTGGACATGGCT 59 2697002 2697078 CTTAAGGGACTCTCGCCAG 59 NA Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 1 1 1 142 2R 2537064 2539495 AAATGGATATCATCAACCAGGG 58 2539598 2539616 TTCATAGACCACGTGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 His2A:CG33826 FBgn0053826 FBtr0091830 1 1 1 60 2L 21473419 21473441 CTAGAATTATTCCGCGTCATCTG 59 21473460 21473479 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33817 FBgn0053817 FBtr0091821 1 1 1 60 2L 21458273 21458295 CTAGAATTATTCCGCGTCATCTG 59 21458314 21458333 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG17949 FBgn0061209 FBtr0085927 1 1 1 60 2L 21423494 21423513 AGAAGAACATCACCAAGACC 57 21423453 21423471 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB38a FBgn0067312 FBtr0081453 3 1 1 80 2L 20817985 20818060 GGAACCAAAGGTACTGTCCT 59 20817924 20817945 GCGATAAATTGGTCCAATTACG 58 NA Drosophila melanogaster 61 CG40463 FBgn0058463 FBtr0100162 3 1 1 60 2L 20226476 20226497 TGTGATCACGAATAGTTTCAGC 59 20226516 20226536 AACTAAACTTAGCACGCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13082 FBgn0032803 FBtr0081251 3 1 1 60 2L 19539173 19539192 GGAGTTGATTCAAGCTCTGC 59 19539215 19539233 GAGGAGATTAGAACCGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18420 FBgn0028866 FBtr0080687 1 1 1 80 2L 14796312 14796331 CGGCGGAACTCTTATATCTC 57 14796073 14796158 AGACGAACAACGATTGTGG 58 NA Drosophila melanogaster 61 CG16853 FBgn0028941 FBtr0080508 3 1 1 60 2L 13542868 13542888 ATTTCAGAGCTGGATGATGAG 58 13542909 13542928 ATTTCTGACCCTTAACTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 1 1 1 106 2L 13457863 13459929 ATCGATCATTCGTTTGGCC 58 13459999 13460017 GAATATCCCACAGCTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 3 2 2 123 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051549 12051568 TGCGCCAATTCACATTATCG 59 NA Drosophila melanogaster 61 Cry FBgn0005664 FBtr0080281 2 1 1 111 2L 11944236 11944998 TGAAACGGACATACTTGTTGC 59 11945071 11945089 TGAAGGTTGGAGGACTTGG 59 NA Drosophila melanogaster 61 Osi21 FBgn0032359 FBtr0080214 2 1 1 121 2L 11284712 11284899 ACATAACAGACGCAACACC 58 11284609 11284627 AGTAGCGATACGGATCCAC 58 NA Drosophila melanogaster 61 CG13136 FBgn0032186 FBtr0079965 3 1 1 60 2L 10136702 10136720 CGAGGTGAAGACAACACAG 58 10136660 10136678 TGCATAGCAATCTCCAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4036 FBgn0032149 FBtr0079870 1 1 1 136 2L 9791684 9791762 CCTATGCCAAACCTCTCCT 58 9791862 9791880 CCATTGATGTACATGGGCG 59 NA Drosophila melanogaster 61 CG12439 FBgn0032094 FBtr0079767 1 1 1 60 2L 9077821 9077839 TACAAGAAGGGACAGGACG 58 9077863 9077881 TTTGATTCCCGGAATCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-29Ca FBgn0040098 FBtr0079715 2 1 1 60 2L 8393744 8393763 TGGGTAGATATCAACAGCCG 59 8393703 8393724 TTCCGGATAGTGTAGAAATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31607 FBgn0051607 FBtr0079579 2 1 1 129 2L 8154039 8154166 AGAAGAGGATCAGGTTATTCCT 58 8154256 8154274 ACAATGTGGATGATCTCGC 58 NA Drosophila melanogaster 61 CG7429 FBgn0031979 FBtr0079540 1 1 1 120 2L 8041181 8041258 GGACAAGACCCAGATACCG 59 8041342 8041360 CACGAACTTCGTCTCACAG 58 NA Drosophila melanogaster 61 Acp1 FBgn0014454 FBtr0079500 1 1 1 112 2L 7741353 7741489 ACAGCACCATGAAATTCGC 59 7741259 7741278 GTAGGACAGTCCATGTCCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 3 5 5 82 2L 6791572 6791590 TTGATCTGGTACAAGGGCA 58 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 CG9596 FBgn0031832 FBtr0079332 3 1 1 186 2L 6560513 6560595 TCAAATAGTGGTAGAGAAGGAGC 59 6560349 6560367 AGGTGCTGAATACCACCAC 59 NA Drosophila melanogaster 61 CG18269 FBgn0031719 FBtr0079103 2 1 1 60 2L 5552558 5552579 TAAGATCGACTACTGGTATCCG 58 5552600 5552618 CTGAGGATCCAAGTCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4ac2 FBgn0031694 FBtr0300456 3 1 1 105 2L 5266805 5266826 GAGGAGATATTGCAAAGTTCCA 58 5266892 5266969 GCCATTTCTGATCTGTGCT 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 2 2 8 92 2L 5068387 5070108 ACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 Rpn11 FBgn0028694 FBtr0079027 2 1 1 100 2L 5058665 5058794 TACAACAAGTCACTGGAGGAC 59 5058585 5058603 ACCTTCTCCTCCAAATGCC 59 NA Drosophila melanogaster 61 v(2)k05816 FBgn0042627 FBtr0077657 3 1 1 89 2L 3055306 3055387 TCAAGGAGATTTGCAGTGC 58 3055440 3055458 TGATCTGTAGAGTGTGCGG 59 NA Drosophila melanogaster 61 CG31690 FBgn0051690 FBtr0301681,FBtr0301682 1 2 2 96 2L 2718917 2719014 TCATTATGCTGACTTCCTGGA 59 2719072 2719090 CAGGGTGTAATCTTGTGGC 58 NA Drosophila melanogaster 61 Prosbeta4R2 FBgn0031443 FBtr0077699 2 1 1 92 2L 2655540 2655622 GGTCTTCATGAAAGATGACCA 58 2655676 2655694 AACTGAATGGTATCGCCAC 57 NA Drosophila melanogaster 61 Atg4 FBgn0031298 FBtr0077953 3 1 1 97 2L 1082047 1082129 GATGACGTATATGCGTCGTG 59 1082187 1082207 TAAAGCGGGTTAATGTCTGTG 58 NA Drosophila melanogaster 61 CG13689 FBgn0031270 FBtr0078071 1 1 1 80 2L 602997 603084 GTGGCTCAAATATACCAAAGC 57 603124 603144 CAGATTCGGATTAACCTCAGG 58 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 2 2 2 116 2L 450531 450674 GTAGAGGATGGCCTTACCC 59 450433 450451 TATGTCCTCGGGATTCGTC 58 NA Drosophila melanogaster 61 Cda5 FBgn0051973 FBtr0113416 3 1 4 92 2L 28474 28493 TACCTATCACACGAGTGGAC 58 27481 28419 AAAGCTGTGAGAAACGGTG 58 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 1 4 5 96 2L 344409 344427 GAAATCCAGTCCGCTAGAG 57 344484 344570 CGGAGAAAGACAATTAAGACTC 57 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 1 3 3 83 2L 862618 862636 TTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033 2 1 3 104 2L 864783 864884 TTTAAACGACGGAGCTTCAG 58 864698 864716 GCTACTGTTTCCAGCACTG 58 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0112936 1 1 2 164 2L 943493 950503 AGTCTTCACATGGACTTCAC 57 951638 951656 GAAGTCGTTCGAGAAGCTC 58 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 3 4 4 103 2L 1085276 1085294 GTGCATCGGGACATAAAGG 58 1085127 1085210 TGATTGGCACCATTGATGAG 58 NA Drosophila melanogaster 61 CG18131 FBgn0031343 FBtr0077935,FBtr0077936,FBtr0077934 1 3 6 123 2L 1500416 1500434 GTAGGTGACGTTCGTTGTG 58 1500037 1500124 ATATGTTGACTTGAGTGGCG 58 NA Drosophila melanogaster 61 CG7420 FBgn0031344 FBtr0077933 1 1 1 104 2L 1501995 1502013 AACAATCGTGGTCAACTGG 58 1501849 1501867 GCTAATGGTTTCCACAGGA 57 NA DesignNoJunction Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 2 4 4 81 2L 1694369 1694387 CATGTACAAAGGCGAGGTC 58 1694432 1694555 ACCTTTGACCTGCAAACTC 58 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 3 2 4 152 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741234 2741252 GGTTGGTGAAGGTGAACTC 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 2 3 7 117 2L 2961988 2962284 ATATCACTGATGAACATGCTGC 59 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 3 3 7 117 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962662 2962680 GGAATTCTTCGGAGTGGTG 58 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0077678,FBtr0290241 1 2 2 80 2L 2971051 2971132 GAGGAAAGTAAACCAGCTCG 58 2970990 2971008 CGATCCACTCTCCTCATCG 59 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 2 8 10 81 2L 3500563 3500645 TGCAACAAGACATTATCACCC 59 3500502 3500524 GTCAGCAAAGTTCTCTGATACTC 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 1 5 11 178 2L 3626210 3626348 AAGCAGAGAAGGATGGACG 59 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290082 1 8 9 83 2L 3879058 3884045 AAGTTCGAAGGTCAAATGCT 58 3878994 3879012 CTGATTAGCATCACCGCTG 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089268 1 1 6 80 2L 4304831 4305358 CTGTAATCATGGATAAGGCGG 58 4305400 4305418 TGGTCAGCCTCTCATTCAC 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301538 3 1 11 87 2L 5004200 5008191 ATACGGATTGGATGCCTGG 59 4994954 4994972 GCCGGATTTCTTCACATCG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 1 4 11 86 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301907 1 1 6 82 2L 5044591 5044609 ATTTGGCCCGATTACTGCT 59 5042879 5044545 TTTCGCCTGCTTGTTTCAC 59 NA InUTR Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 1 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 1 4 4 77 2L 5221390 5221470 TTCTCATGTGCAAGGTAGC 57 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 nompC FBgn0016920 FBtr0079075,FBtr0300012 2 2 3 89 2L 5364407 5364783 GATCAAGAAAGACTCAGTGGC 59 5364834 5364852 ATGCGATTCTGATTGGCCT 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 1 3 3 87 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095143 6095248 GTAGAGCGGATTCATATTTGGG 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 2 5 5 82 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791313 6791526 TACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 1 4 4 80 2L 7649009 7649028 TTGAGGACTTAGTCCTTTGC 57 7648880 7648969 GCTTAATTGTACTGAAACAGGG 57 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 1 3 5 80 2L 7687853 7687871 GCCAATTACTCTCGTCGTC 58 7687915 7687983 CTTATCGGAGTCCAATGGC 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0302147,FBtr0302148 1 2 9 103 2L 8227138 8227677 CTTTATTGCAACCGGATTGGA 59 8227055 8227073 TAACAGTGAGGACCTCGTC 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 2 2 9 92 2L 8226598 8227679 CGCTTTATTGAAGACGGCA 58 8226524 8226542 ATCCAGGGTGAAGTTGGTG 59 NA Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 1 1 1 60 2L 8302774 8302793 TATCTACTCTCGACGCTTGC 59 8302674 8302692 TCTTGTAGAGCACCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Aats-ala FBgn0027094 FBtr0079721,FBtr0079722 3 2 2 96 2L 8380511 8380529 CCATTGCTTTGGCTGATGG 59 8380310 8380451 TTCTCAGTGGCATAACGCA 59 NA DesignRelaxed Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 1 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 1 3 3 80 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575368 9575386 TTCACAAAGTCGGTGTCCA 59 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079898 2 1 2 105 2L 9924152 9924302 GGTAGAAGGCATCGAACGA 59 9924065 9924084 CACATAGAGGGACAATGGGA 58 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 2 2 2 80 2L 10236971 10236992 GAACCGATTTCAAATTTGAGGG 58 10236533 10236933 GAACAATACCGAAATCTGAGGG 59 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 3 2 2 81 2L 10236972 10236993 GGAACCGATTTCAAATTTGAGG 58 10236533 10236933 GAACAATACCGAAATCTGAGGG 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 7 7 83 2L 10259082 10259101 GTTGATATGTGGCTCAAGGA 57 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 2 5 6 100 2L 10399597 10399615 AATGCATCAGGGAAAGCAC 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 1 4 4 80 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415400 10415480 GCTGAAGGTACTTTAAGGCA 57 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 3 4 4 76 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965843 10965861 GCTAAATCGCTAACGCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 1 1 1 168 2L 11016283 11016301 GAGCAGTCAGGAGAACCAG 59 11016499 11016517 TCTTCCAAAGTCCCTCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223,FBtr0301841,FBtr0112856,FBtr0301840 2 4 4 82 2L 11143208 11143227 CAACCACAAAGACCCTTTCG 59 11143079 11143167 CTCACCAATGAAGACATAGATGC 59 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 3 2 4 95 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404097 12404115 ATCGGAAGCTTCGAATTCG 58 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886 3 1 5 86 2L 13578247 13609801 AGTTCGCTGTCATGAACGA 59 13609850 13609869 TTGTGACTAGCTCGGATGTG 59 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080600 3 1 2 80 2L 14164072 14164092 CCAGGTTAAGGACTCTTTGTC 58 14163420 14164033 GTGCTATCGTTCTTAATCTTGC 58 NA Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636 2 1 3 80 2L 14389444 14391083 TTGGTGTATATGTGAAAGCCAC 59 14389385 14389406 GTGCCTCCAATGATAAATGGTC 59 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 1 4 4 80 2L 15065447 15066947 CGATAGAACTGGTGTGAAGTC 58 15065387 15065405 TCAATAGCCTCCTTGACCG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 3 3 9 112 2L 15261796 15261815 AAATCTACGACGAATCCTCG 57 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0080876,FBtr0080879,FBtr0100399 1 4 7 165 2L 16483941 16483959 CTAAAGCGCCTTGACATCG 59 16481538 16483812 TGATCGATAGGCATCTGGC 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941,FBtr0080940 3 2 3 120 2L 16724151 16724169 TCTTGGAACAACTCGGAGG 59 16723889 16724070 AGGTATTCCCAATTGTGTACCA 59 NA Drosophila melanogaster 61 CG31812 FBgn0051812 FBtr0290062 3 1 1 83 2L 16730162 16730181 TTGAAGTCCAAGAATTGGGT 57 16730280 16730299 GTACAATCGAGGACTTTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080901 2 1 16 81 2L 16777432 16778015 AAGATGCGGTACCAGATCC 59 16778058 16778078 ACTCAATCAGAACCTTGGAGG 59 NA Drosophila melanogaster 61 beat-IIIc FBgn0032629 FBtr0080971,FBtr0080972 1 2 2 80 2L 17191092 17193536 TGATTGTTGCGTATCTTCCG 58 17191031 17191051 GAACATAGTCTCCGATTTGGT 57 NA Drosophila melanogaster 61 Dif FBgn0011274 FBtr0081008,FBtr0301578,FBtr0081009 2 3 4 80 2L 17415383 17417583 TACCCGAATCCAGAACTCC 58 17415321 17415339 CATGAGACTGCGCTTTAGG 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 1 4 12 83 2L 17717888 17717910 CCAACGATCTGGAATACTTTGAG 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 1 4 12 85 2L 17717899 17717918 CTTCAATCCCAACGATCTGG 58 17716680 17717851 GATAACAACCGTCAAGCGG 59 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 3 4 4 110 2L 18827244 18827517 CACTATTAGCTTAGAGGACTTCGA 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 2 2 2 87 2L 19009004 19009022 AAGCAGACCTTGAAGACCC 59 19008530 19008953 CGATCTCGGACTTCCTCAG 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0302108,FBtr0302107 1 2 6 96 2L 19513107 19513126 CCAACTGAGATCCATGTACC 57 19512970 19513048 GACAGGATCGGCTATAGCT 58 NA Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 2 2 2 85 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891876 19891897 GATTCTTGTCGTACTTCTTGCA 59 NA Drosophila melanogaster 61 dia FBgn0011202 FBtr0081411,FBtr0081410 3 2 2 69 2L 20766014 20766032 AGTGCAGACAACAAGTGGA 59 20766142 20766160 CTGAGGTCCTTGTACAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 vari FBgn0250785 FBtr0089945 2 1 3 80 2L 20790711 20791239 TCGCTATACTTGCTACATGC 58 20790650 20790669 AATCCAATATCCCTGCATGG 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508 1 1 4 97 2L 21291576 21291600 CATCCTACCTTTAGTCGTTAATGAC 59 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg3 FBgn0259936 FBtr0300250,FBtr0300249 3 2 3 97 2L 20647992 20648011 CGAAAGAATGGTTTCCACAC 57 20648244 20648435 CGGGTTTCAGCATTATAAGTG 57 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 2 5 5 80 2R 19472 19550 GTAATCACTTCAGTTGAGGTGG 59 19586 19609 GTCTAAATCAAGGAGATCGTACTG 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 3 4 4 82 2R 706847 706866 TAACCCGTCTGTTGGAAGAG 59 706726 706805 AGAGGTAATCTTCTTCCCACAC 59 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299918,FBtr0301063 1 2 4 82 2R 1334202 1334226 CTACTAAGGATACAATTGCAGTACC 59 1334266 1334346 GAATAGCCAGAAGCCAGGA 59 NA Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 2 1 1 76 2R 1541380 1541399 GTATGGTCAAATGGAGTGGG 58 1541490 1541508 TTTAAGATGTACGGGTGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 2 4 4 80 2R 1662571 1662645 TGCATCTCGTTACAGACTCC 59 1662510 1662531 TATATCTTGGGCTGGATACGAG 59 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 3 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662529 TTATATCTTGGGCTGGATACG 57 NA Drosophila melanogaster 61 Src42A FBgn0004603 FBtr0085968,FBtr0085967 1 2 2 80 2R 1896789 1896808 TACGGTTAAGCATTATCGCA 57 1896851 1896936 TGAAGGGTTCTGAATGTCG 57 NA Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 2 1 1 163 2R 2536952 2536970 CCCAATCCCTCTAACGGAC 59 2539507 2539525 GCTCTGATGTACTGACCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050,FBtr0111096 1 2 59 80 2R 3219877 3227671 TAATTGTGAACGTACCTCCCA 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 2 2 59 96 2R 3236476 3245111 CAATGCCGTTCTTTAGATGGT 59 3236400 3236418 AGAGTACCAGAGACCTGCT 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111078 2 1 59 81 2R 3246158 3246176 GAGATTTCCCAGGGAATCG 57 3236467 3246114 TGAACTTGTACCATCTGTGG 57 NA Drosophila melanogaster 61 CG11125 FBgn0033174 FBtr0300694,FBtr0088974 1 2 2 103 2R 3336439 3336510 TAAGAAACGCTACGAACAGC 58 3336576 3336594 TCAGCTCCTTGTCGATCTC 58 NA InUTR Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 3 5 8 109 2R 3355323 3356624 CACTATGCCGTTGATGTGC 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 3 2 3 81 2R 3472856 3474448 AGACCGAAATCGCAAACTG 58 3472793 3472815 CTGTATCTGTATCTGGCATATCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088874 2 1 3 80 2R 3859193 3859212 AATTGCCAATTGACGACACC 59 3859025 3859150 GCAGGTACTCCGTATGTCC 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 3 3 4 190 2R 3872609 3872628 AAATGAGTCCAATGACACGG 58 3870502 3872393 ACATACTCGGCCTTAACCG 59 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0113055 2 1 2 80 2R 4026495 4026514 CATCATGCGCATCTTTACGA 59 4025179 4026452 CTGCAGTATGAGGACTGGA 58 NA Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 3 2 2 86 2R 4351004 4351022 TTCTACCTGCACCAGTTCG 59 4351070 4351147 TCTCAAGACGTTACTCATGGT 58 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299788 2 1 2 80 2R 4462506 4462589 TGAGAAGCACAAGAAACTCTG 58 4462446 4462466 GAAATCACTTTCTTGATGGCC 57 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 1 9 9 80 2R 4566363 4566440 AGTTGCTCATTGCATCACC 58 4566484 4566502 AGCAGCGTCTTAAACTTGG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0100426 2 1 9 80 2R 4553805 4563986 ATCGTATTGTGTAATGGACAGC 59 4564026 4564045 ATGATGTCGTAGACAAAGGC 58 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290278,FBtr0290279 2 2 2 256 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838055 4838073 CACTCCAGACACTCGTCTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 3 12 12 80 2R 5005349 5005432 CAGCTGCCTAATGTCATTCC 59 5005474 5005493 ATTGGACGTGACATTAACGG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 1 3 12 156 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006543 5007266 CATTACCACCGGATTGCTG 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 1 2 4 88 2R 5013708 5014931 AGGACAAGACTAATCCGGC 59 5013524 5013544 CTTGAATCCCTTATAGGCGGT 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0088605,FBtr0302602 2 4 10 80 2R 5143379 5143399 GCTTGTGTCGAAAGTATTCTC 57 5143200 5143338 CAACTGTGGTATAACCTGCT 57 NA Drosophila melanogaster 61 Orc6 FBgn0023180 FBtr0088482 3 1 1 214 2R 5733917 5733936 GCACGACTGGAATTTCAGTC 59 5733666 5733684 CAATCATGCAGGAAGCGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300920,FBtr0300919 2 2 4 103 2R 5782187 5782265 CCGAAGAGAAACCAATAGCTG 59 5782329 5782348 GGATACAGGGTATGGTGGAC 59 NA Drosophila melanogaster 61 CG12134 FBgn0033471 FBtr0088388 1 1 2 80 2R 5858913 5858988 CAAATATTGCGAAGAAGCTGC 59 5859030 5859048 CTACAAGTGTCCTCATCGC 58 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905,FBtr0088391,FBtr0112906,FBtr0088392 2 4 4 101 2R 5880408 5880493 CGGACAGAACTTCAGATTCC 58 5880557 5880575 TAAAGATCATCGTCGCCGT 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0088391 2 1 4 92 2R 5876801 5877986 TCCAAGGGTGAAGATCTGG 58 5878042 5878060 AGAGTTGTCGTCATTCTGC 57 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 2 3 5 83 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884052 5884070 CGTAGTCGTCAATGTTGCG 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 2 3 3 80 2R 5919619 5919726 CAGATCAATGGAGGATACCG 57 5919558 5919577 TAAGAATGCGTTTCTGGGTG 58 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 1 3 4 105 2R 6034471 6034492 TGCTTAACTCATATCAGTTGGG 58 6034320 6034408 CTATGAAGGCTTAACGTAACAC 57 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460 3 1 3 130 2R 6322088 6322164 GGAAATGGATGTAGATGTTTCC 57 6322252 6322273 CCTCTTCAGTCATTAGGTTCTC 58 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284 1 1 3 161 2R 6527873 6527891 GTCCTTGGATGACCTGGAG 59 6528078 6528179 TTCTTGTAATCGTCCTCAGCT 59 NA Drosophila melanogaster 61 fbl6 FBgn0033609 FBtr0088180,FBtr0088178,FBtr0088179 2 3 3 80 2R 7174697 7174719 GGATCATCTTACGTATTTGGTGG 59 7174583 7174660 GCATTCATCTCAACATTGATGG 58 NA Drosophila melanogaster 61 CG9027 FBgn0033631 FBtr0089939,FBtr0089938,FBtr0100658,FBtr0110897 1 4 4 80 2R 7269510 7269528 CACATTCACGAGAAGGGAG 58 7269385 7269466 ACCGTGATCAACCTTATCG 57 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 1 4 4 270 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393725 7394162 GAACTCGTGCTTCAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 2 4 4 272 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394164 TTGAACTCGTGCTTCAGTC 58 NA DesignRelaxed Drosophila melanogaster 61 en FBgn0000577 FBtr0088095,FBtr0088096 1 2 2 228 2R 7413964 7413982 AATGGAGTCCTCGGATGAC 58 7412341 7412639 GTTGAACTCCCGCTTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 3 2 2 95 2R 8156862 8156880 GAGAAACTCACAGACGAGG 57 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 CG8830 FBgn0033738 FBtr0087950,FBtr0087951 2 2 2 81 2R 8320535 8320556 CAAGCAGTTCAAGTACGATCAG 59 8320418 8320493 TACTGTGACGCTCTCATCG 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 1 2 4 88 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464425 8464443 TTTGATCTCCGCTTGTTGC 59 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 1 3 3 91 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527567 GCGGAGAAGCTCTTATAGC 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0087879,FBtr0087877,FBtr0087875 2 6 8 182 2R 8558844 8559069 CGGATGAGGAAATCTGCAG 58 8558680 8558698 CTTATAGTCCCGGCTTGGT 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 2 2 8 96 2R 8561427 8563642 ATAATGCCAAGCTCAGTCAG 58 8560791 8560809 GCGAACATGTCGAATAGCA 58 NA Drosophila melanogaster 61 CG13148 FBgn0033767 FBtr0087848,FBtr0087847 2 2 2 84 2R 8575267 8575285 GTAGCTTTACAGAGGGCAG 57 8575391 8575409 GAGTAGCGAAATCCCAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801,FBtr0302198 3 2 2 96 2R 8828668 8828757 ACAGTTGAGAAATCCGAGGG 59 8828591 8828609 TGAGATTTAGGCCCTGCAG 59 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087774 1 1 2 96 2R 9046337 9046355 TCACATTGCCGATCATCAG 58 9045769 9046277 AATTCCTTCGTAGCTGGTG 57 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 3 3 3 90 2R 9057262 9057280 TTGTTCATCGACGAAAGCA 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 CG17048 FBgn0033828 FBtr0087721,FBtr0302450 1 2 2 94 2R 9241391 9241559 CAGTTCCACGATAACTGGC 58 9241315 9241333 CACCAGTAAAGCAACAGCA 58 NA Drosophila melanogaster 61 mip120 FBgn0033846 FBtr0301388 1 1 2 83 2R 9397224 9397304 ACTTGACCGATTCCCTAGAC 59 9397350 9397368 AACTCTTCTCCGACGTTGG 59 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 1 5 5 149 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 2 4 4 112 2R 9717360 9718064 CTGCATACAAGTGACCACTG 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 1 4 4 110 2R 9717362 9718065 GCATACAAGTGACCACTGC 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 1 9 15 127 2R 9759583 9759601 ACCACAAGGAGTTCATGGA 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 Rcd1 FBgn0033897 FBtr0087583 2 1 3 102 2R 10039637 10039656 CATCAAAGTCAGTTCTCCGC 59 10039417 10039574 CGAAATGGTACTGGAACTCTC 58 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 1 3 8 80 2R 10064187 10065378 GACAAGAACTGTGACATACTTCC 59 10065418 10065436 CGAGTCCTCGTTATCCTCC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0112795 3 1 8 89 2R 10067359 10067377 GCCTTCTTCCAGAAGAACC 58 10067430 10067938 TGGTACAACAAGCTGTTGC 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087573 1 1 2 80 2R 10121837 10122206 TCGAAGTTGCCAAAGATGAC 58 10121776 10121796 ACTTCTTACGACTCTCATCGG 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 igl FBgn0013467 FBtr0087361,FBtr0087362 1 2 2 120 2R 11068205 11076268 CAACGACAAGGATCTGTGC 59 11076349 11076370 CTTGGTTATCTCCTGAATGTCC 58 NA Drosophila melanogaster 61 scb FBgn0003328 FBtr0087370 1 1 2 131 2R 11140394 11140414 TGCAATGCATTCAACCTATCG 59 11140507 11141560 CACAATGATGCCATTGGGT 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 2 4 4 80 2R 11344304 11350806 TGATATCGAGGAAGAAACGTC 57 11350848 11350866 CTCTTGAGGAGCATCAGTG 57 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 3 2 5 80 2R 11773649 11773671 CTAACTGACAATCAGATCCACAC 59 11773149 11773609 GTTGTTTAGGCGTAGTCGC 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 2 7 7 80 2R 11992619 11992640 ATACTGATGTGTTTCTCAGTGG 58 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 3 7 7 81 2R 11992618 11992639 CATACTGATGTGTTTCTCAGTG 57 11992681 11993233 AAAGTGTTTGACCTCTGGG 57 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 1 5 5 82 2R 12093319 12093420 TGAAGTGAAGAAGGCATATCG 58 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175 1 1 5 96 2R 12214656 12217750 ATCTCAAGGCCGAACTACC 59 12214578 12214596 ATAATGTCGGCGATGTTGC 59 NA Drosophila melanogaster 61 Cdk4 FBgn0016131 FBtr0087104,FBtr0087103,FBtr0087102 2 3 3 102 2R 12470528 12471664 GCGAATATTGTCAAACTGTACG 58 12471727 12471745 GATCCGAAAGATCCTGCTC 57 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 2 3 6 198 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678300 12678318 CTCGGATCAAGTTCCAGGT 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 1 3 4 80 2R 12747015 12747035 ATGACAAAGATGAATCCGACG 58 12747077 12747153 CGCGTATTTGTTCATCCGT 59 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100250,FBtr0100252 2 2 4 88 2R 12884559 12884577 CCGTGTTACCATGACTCGA 59 12884222 12884507 GTGTTGTAGCATTGCCGAC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968 2 1 2 81 2R 12912785 12912870 CACGGAGTCTGTCATCTGG 59 12912913 12912933 CAAAGCCGACAATGTATTCCT 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273446,FBtr0086950,FBtr0300605 2 3 8 82 2R 13408430 13410372 TAATGAATCTGTGCGGTCC 57 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 2 2 2 80 2R 13679576 13679594 TTCGATATCCGCTCTTTGC 58 13679637 13679719 GCAGCAGGTCATTATAGACC 58 NA Drosophila melanogaster 61 CG5767 FBgn0034292 FBtr0086811 2 1 1 78 2R 13934536 13934554 CAACAGCGACAACGATACC 59 13934295 13934317 GCCATAGATCACAGATACATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 2 3 6 81 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169009 14169144 CATGTAATACCGTCTCAGCTC 58 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 3 3 3 84 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181822 14181840 TGTTTCGGGATGCTAAACG 58 NA Drosophila melanogaster 61 SP2637 FBgn0034371 FBtr0301861,FBtr0086657,FBtr0301862,FBtr0086658 1 4 4 80 2R 14529562 14529647 CAGCATTATGCAATCATTCCAC 58 14529503 14529522 ATCATGGTATTTAGCTCGCC 57 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631,FBtr0086630 1 2 2 124 2R 14710833 14710852 GCATCTGTATTGCATTGGTG 57 14710665 14710746 CTTCATGGGTGGATCTTCG 58 NA Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 2 2 2 81 2R 14996382 14996400 ATCCAGACTATCTGCAGCG 59 14996444 14996532 CAACAGGTGGCAAATACCTG 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0086588,FBtr0086585,FBtr0290316,FBtr0290317,FBtr0290312 3 5 12 170 2R 15062802 15063699 GCAATTCACTTGGACCACG 59 15063831 15063851 GCTTTATGCCATTCTCGATGG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 3 3 10 146 2R 15295396 15295415 CACCAGGTCATTGAGATCCA 59 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 2 4 19 84 2R 15370533 15370552 ATGCCCGATCAGATAATGCA 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086495 1 1 6 80 2R 15434003 15434022 GCAACCCTAACATCTACCGA 59 15425705 15433960 ATAGCGGTGGTTCATTGGT 59 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 2 2 2 169 2R 16150141 16150159 TCAATGAGGCAACCTTCGA 59 16149930 16149948 CAGAATCTTGGCCATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Fem-1 FBgn0034542 FBtr0086245 1 1 2 82 2R 16552567 16554438 CACCTGGTGAATACAAATTTCG 58 16552506 16552524 TTCACATTGCCCATCATCG 58 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 1 6 6 80 2R 16974216 16974301 CACATGTACGAGAAGTACAACG 59 16974342 16974360 ACCGAATCCAGTCTGTACC 58 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071604,FBtr0071602,FBtr0071603 1 3 4 81 2R 17218957 17218978 CAAATGGACGGAATTACATTCC 58 17219017 17219267 CTAGATTTATTTGCGTGAACGG 58 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071604,FBtr0071602,FBtr0071603 2 3 4 82 2R 17218961 17218980 TGGACGGAATTACATTCCAC 58 17219022 17219272 CGTCTCTAGATTTATTTGCGTG 57 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 1 2 2 86 2R 18013771 18013789 AAAGAACATCAGCCTGCAG 58 18013648 18013721 TTTAAGGCTTTCTGCTCGC 58 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 3 2 2 81 2R 18075288 18075364 TGAACATGAACAACATCTCCC 58 18075404 18075425 TTGTAGAAGTCGATACAGATGC 58 NA Drosophila melanogaster 61 CG30217 FBgn0050217 FBtr0071925,FBtr0071926 1 2 2 83 2R 18543965 18544135 CTCCTTACCATGTGCTGCT 59 18543900 18543918 GCAGATGACCTTGCAATCG 59 NA Nonspecific Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 3 2 2 81 2R 18703125 18703200 ACCATCACATTCAGATATCTCC 57 18703241 18703260 TTTGCTACTCAGTTCGTCTG 58 NA Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 1 2 2 89 2R 19437532 19437550 GACATCAGAAGAAGCGTCC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0072078,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 12 13 81 2R 19565944 19565962 CAGCATACCAAAGAGCCAG 58 19566007 19566083 CATGTCGATGAAGCTCTCC 58 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 2 2 3 133 2R 19648482 19648500 TATCTGGAACGCAATCGAG 57 19647296 19648387 ATATCGAGTTTGGTTATGGCC 58 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 2 3 3 80 2R 20398305 20398384 TTCGTAAGGTGTTGGAATCC 57 20398244 20398263 CAAGCAGACTGATGAGTTCC 58 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375,FBtr0113377,FBtr0113376 3 3 3 86 2R 20853554 20853636 TAGCCGATATGTTCGACGA 58 20853486 20853504 CGTCGATCATGTTCAGCTC 58 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273353,FBtr0273351 3 2 3 94 3L 148397 148466 GATTTCCGAAGATAGAACAAGC 57 148521 148539 AGTTTCTGGTGTGCTTCAC 58 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 2 4 4 96 3L 177449 177469 CGAGAACAATGGCATTATCCA 58 177320 177392 GAACGGTTGTGCTAAGATGG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 1 2 10 102 3L 298046 298064 CTGTGAAATCGTCACAGCT 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573 2 1 2 103 3L 335048 335068 TTTATATCTCGGATCTGGCCA 58 333631 334983 ACTCGAGCATCTGTTTGTG 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 3 2 2 81 3L 1644054 1644073 GCGCTTCTGGATACTTACAG 58 1643936 1644014 CAGTTTAAAGACCACCATACCTC 59 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072956 1 1 5 196 3L 2564417 2564435 CGATGGAACTCTATTGGCC 58 2562828 2563820 TGTTCTGCTCTAGTTTGCG 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 5 5 143 3L 2611831 2611849 AATAATCGGCTAAGCCGCT 59 2611548 2611649 GTACATGATCAGGCGATTCAG 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 2 3 3 87 3L 2723386 2723471 GCTATAGTGGTGAAGCAGGA 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 CG14955 FBgn0035399 FBtr0073123 3 1 2 115 3L 3112557 3112639 TTGCTCGAGGAAATTCCCA 59 3112460 3112483 GAATTTCTGAGGTTCTTACCATGG 59 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 3 3 3 83 3L 3119726 3119808 TTAAGAGATGGCGTCCGTG 59 3119661 3119679 GAACTTCTGGCACATCTGC 59 NA Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 1 2 2 122 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237555 3237573 ACAGAACTCGAGCACTTCC 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 3 5 5 82 3L 3312394 3312525 CCATATTAGGTGCCGTAACC 58 3312570 3312588 AGTGGATACCCTCGTTGTG 59 NA Drosophila melanogaster 61 kst FBgn0004167 FBtr0073071 1 1 4 113 3L 3366206 3366224 AACAATCCGCCACTTTACC 58 3366300 3367161 CTGAAGAACCCGATTGTCTG 58 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 3 3 3 85 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023615 4023697 CCAGTCCAGTAATCACTCCTC 59 NA Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073198 3 1 2 88 3L 4032071 4032090 AGCCATTTGTCTGTTCATGG 58 4032139 4032206 GCTATTATCAGAACATGCCCA 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 1 3 6 122 3L 4095861 4097514 CGAAAGAGGAATACTACCAGTC 58 4095760 4095778 CATAGGGATTGTGGTGCAC 58 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 2 3 3 99 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 2 4 6 239 3L 4418264 4418282 CAGGCGATGTAATTGAGGT 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 3 4 10 83 3L 5538088 5538107 CGAACCGTCAGTACTATTCG 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 2 3 10 81 3L 5535644 5535663 AATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112711,FBtr0112710,FBtr0112713 1 3 8 200 3L 5724548 5724566 AGCAAGGATTTGTACTCGC 58 5724730 5727550 AAATCCGGTAACTTGCTCC 57 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103 2 2 6 134 3L 5764463 5764727 TGCGAACAGACAATAACGG 58 5764825 5764843 GATAGAGGACCCTCTTCGG 58 NA Drosophila melanogaster 61 CG42272 FBgn0259167 FBtr0299616 1 1 2 112 3L 5796513 5797327 TAAAGAAGTAGTCGAGCGC 57 5797403 5797421 TGGGATGAACATACTGCAG 57 NA Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 1 1 1 60 3L 5898844 5898864 CCTACGATACCTGCTTTACGA 59 5898723 5898742 TACTTGGGACCCACATACTC 58 NA DesignNoJunction Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 1 3 3 82 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088583 AAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 Trn FBgn0024921 FBtr0077002,FBtr0077000,FBtr0077001 3 3 3 81 3L 6190640 6190720 CATCAGATGATACAGAAGATTCTGC 59 6190758 6190777 GGAATTGCTCCACAAATCGA 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 5 6 105 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555510 6583714 ATAGATGTCTTCTCCCGTCG 58 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 3 2 3 98 3L 6741027 6741048 TGAACTCCAATGGAAATCTCCA 59 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 melt FBgn0023001 FBtr0302044 3 1 2 118 3L 7134593 7134611 TATGCGTGATCCTGTTCAG 57 7134692 7134817 CATTGGAAACCTCAATGCTG 57 NA Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 1 1 1 77 3L 7233063 7233081 GTGCTCATCGAAGAGTGGA 59 7233180 7233198 CTTAAGTTTGCCCTGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 pst FBgn0035770 FBtr0273398 1 1 2 82 3L 7352691 7352785 GCAGCAACGAAAGTATACCA 58 7352628 7352646 GATTGACGTCCGTTTCGTC 59 NA Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 3 3 3 88 3L 7558075 7558155 CTAGCTGCCTCGATATCGA 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851 3 1 3 102 3L 7626705 7628793 CCAACTATGTCACCTCATGGA 59 7628856 7628875 TGTTCCTGAGTCCTCAACTG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076777 3 1 7 86 3L 7846341 7846359 AACACTGATCGAAACTGGT 57 7813120 7846292 GATTTCCTGCCATTAATGCC 57 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 CG7565 FBgn0035833 FBtr0076738,FBtr0273371 3 2 2 80 3L 8082712 8082789 GTAATACGACTACTAGCTTGCC 58 8082653 8082672 AACTCTTGATGCCAATGTCG 59 NA Drosophila melanogaster 61 CG7504 FBgn0035842 FBtr0273367,FBtr0273368 3 2 2 98 3L 8126880 8126957 TACCAGAGTCAATAGCAAACC 57 8126802 8126821 TTAAGCTCCAACAGATTGGC 58 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076619,FBtr0076618 1 2 4 80 3L 8463408 8463431 CCAAATATGCTTATACCTAGGGAG 58 8463466 8463539 CTGTAAATACTGTAGTTGGTCGG 59 NA Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 3 2 2 67 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529282 8529300 GTAGAACTCCTCCCAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 1 5 13 83 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089566,FBtr0301154,FBtr0301157 2 3 13 163 3L 8627809 8627828 GACAGTATCATGAAGCAGCG 59 8628167 8630547 TTCTTATAGGGAACTGTGGATCTG 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 3 2 4 114 3L 8960607 8960689 GTCAAAGAACAGTCGGGTC 58 8960767 8960785 GAACTTCAGGCCGAATAGG 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462 1 1 5 80 3L 9100803 9101068 GTATATCCGCCAGTTACTGAC 58 9100743 9100762 GAATGGCTGATATTGCATGG 57 NA InUTR Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 2 4 12 114 3L 9774996 9775719 ACCTGGGTAATTTGTCTGG 57 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 3 1 1 85 3L 10458463 10458481 GGGTCAACTCTCGATTCCC 59 10459302 10459322 CGGTAAGACTAAACCAAACCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 1 3 4 80 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032792 11032810 AGAGATTACCAACGGAAGC 57 NA Drosophila melanogaster 61 Elo68beta FBgn0036128 FBtr0113161,FBtr0113162 1 2 2 96 3L 11094532 11094617 CAAATGGACAGCCAGATGC 59 11094454 11094477 CTCCAGGCAAATATAACCATTGAG 60 NA InUTR Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 1 3 3 80 3L 11622539 11622558 GTGACGTTCAAGACGTACAG 59 11622598 11622695 TTTACTGATGATGTCCTTGACG 58 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113168 2 1 3 86 3L 12471220 12474756 TCAGGTGTAGTGGCTATGTG 59 12471153 12471172 GATAGTGCTGATGGTGTCGA 59 NA Drosophila melanogaster 61 ara FBgn0015904 FBtr0075908 2 1 2 88 3L 12582658 12582676 GAAATGGGAGCTTGGACCT 59 12582728 12587276 ACAAGCAATCCTCCGTAGG 59 NA Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075895 1 1 2 93 3L 13014647 13015545 ACGCTACAAGAAGGAATCC 57 13014572 13014592 TCATAGAGTACTTCTGCAGGA 57 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0075809,FBtr0075807 3 3 5 142 3L 13474228 13474325 CGACTCACACTTTGGTTTCC 59 13474428 13474448 AACCATCTGGGATATACTGGC 59 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0114573 3 2 3 156 3L 14058246 14058721 AAGGAGTCATCGGAAACGG 59 14058841 14058859 GCTGAGATAGTCGACCAGG 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100039,FBtr0100040 2 2 6 180 3L 14193376 14193395 ATGGGAGCCATAATATGAGC 57 14193538 14193847 TCGTCATCATCTTGAGGTG 57 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273422 1 1 7 95 3L 14503010 14504014 CTAACAAACGGAAACCTTGTC 57 14502935 14502954 CTTATCATCAGTCAGCTGGG 57 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0075715 1 1 3 85 3L 14623289 14623634 CAGATCTGTATGAGGGCGG 59 14623222 14623241 AGAATCGTCATCTGAGCCAG 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 8 9 60 3L 14750037 14750055 CCACAAGATAGTCCTGTGC 57 14747642 14750016 TGGTGTATTCTTTAGCAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sytbeta FBgn0261090 FBtr0299848 1 1 2 95 3L 15041898 15041916 CTACCTTCTGCGTAAGCGT 59 15012037 15041840 ATAGCCACCTCCTTCATCTG 59 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 3 2 3 93 3L 15104004 15104022 CAACAACATAACCACCGGA 58 15104079 15104197 GTGTGGGACAACTTGAACC 59 NA Drosophila melanogaster 61 CG13455 FBgn0036498 FBtr0075544 3 1 1 93 3L 15490340 15490358 TACGACTCCATCAGTCCAC 58 15490483 15490501 TTTCCCTCTTGGCTAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0301186,FBtr0300329 2 2 3 80 3L 15580157 15580176 AATGAGCCGAACACATTCTC 58 15579692 15580114 GTCCTTACCCTGTGAGTCC 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100035 2 1 5 90 3L 15861722 15861740 GAGTCCAGTTCGGATAAGG 57 15860711 15861668 TCAGAGTGCCATTTACAGG 57 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0112851 3 3 7 156 3L 16059929 16063240 CTTCAAGTTGGAGGACATAACC 59 16063356 16063438 GGAAGCATTTAGTGCGATGG 59 NA Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 3 1 1 104 3L 16225350 16225369 GAGAATGTTCGTCAGATCCG 58 16225492 16225510 GATCTCTTGTAGGCCGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418 1 3 4 80 3L 16376953 16377036 CTTTACTCCCAACTTATCTTCGTG 59 16376896 16376914 CTCGAAGTCCTCCTTGTCC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 1 5 7 80 3L 16952972 16954605 CAGGAGCTACCAGATTCGA 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 1 2 4 80 3L 17061138 17061156 GATCTAACCAATGGGCAGC 58 17060462 17061099 CTGATAGTTGTTCATCACTGACAG 59 NA Drosophila melanogaster 61 CG5103 FBgn0036784 FBtr0075132 1 1 1 151 3L 18286560 18286579 CGAAGGAATCGAAGAAATGC 57 18286364 18286382 TGTTAATATGCACCTCGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4174 FBgn0036793 FBtr0075111 2 1 3 83 3L 18594997 18595018 ACATGTCAACAATCTTCAGAGC 59 18594769 18594959 CCTAGATCTTTCTTTAATAGTCGCC 59 NA Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 3 2 2 82 3L 19272149 19272168 CGTGCTGGTAATGTTTATCG 57 19272211 19272501 TTCGCTGGTAATTATCCTCTG 57 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 2 4 4 110 3L 19620620 19620639 GGTGTACGAGGATAAGTTGC 58 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 3 5 5 80 3L 19795361 19795442 GGCATGTATTTGTGGTACGAG 59 19795484 19795502 CACCAGACAGGTTACTCCA 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 3 2 6 87 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851538 19851557 CAGAGTCCCAAATTCTTGCC 59 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0302047 3 1 2 97 3L 19890505 19902364 TGTAAAGCCACAAATCCAAGTG 59 19890429 19890449 TTGTTGCTATACTGTGCAAGC 59 NA InUTR Drosophila melanogaster 61 CG33969 FBgn0053969 FBtr0100010,FBtr0100011 1 2 2 81 3L 20385586 20385755 AGTCCATGTTGAAAGTGGC 58 20385523 20385544 CTGGTCATCTTTCAATTTCAGG 57 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0111038 1 1 4 144 3L 21061267 21061820 AATTGGCGAAAGCTTTCCC 59 21061926 21061946 ATTCTGCAGGTAAACATAGCC 58 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304,FBtr0273212,FBtr0273213 3 3 4 85 3L 21205481 21205894 GACACTTGGAAATGTCTTCAC 57 21205941 21205959 GGTCTCCTGAATGGTGGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 3 3 3 81 3L 21414145 21414217 GTTATCTATGATCGCCATCCTG 58 21414085 21414105 TCATTTGAATGACGAGGTCAG 58 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 2 3 4 117 3L 21488959 21489529 GAAGTGATTCTGTGCAGCA 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 3 2 3 171 3L 22262796 22262815 ATACTTCGTGGTCACTTCAC 57 22263010 22264666 AACGTCCTCATTCAGATGTG 58 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914 2 1 2 90 3L 22268527 22271930 ATTCGTCAGTCTATCGGAGC 59 22271981 22272001 GTCTGAAACGTAAAGACTGCT 58 NA Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0112842 3 1 2 80 3L 22297624 22298082 GTACTAATACTGGAAGGAGCCC 59 22297565 22297585 GAGAGTAATCTGGCCAAAGGT 59 NA Drosophila melanogaster 61 CG11241 FBgn0037186 FBtr0113188 1 1 2 83 3L 22726681 22728019 TTCATGGAAACGTGCTGAG 58 22726616 22726634 CTTCCTCCAGTGTCTCCAG 59 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143 1 1 2 88 3L 24124312 24124330 GACGTATGCTTGCTCTGTG 59 24154275 24203134 ACGATCCAGTTGTTCTCCT 58 NA Drosophila melanogaster 61 aux FBgn0037218 FBtr0078965,FBtr0078966 3 2 2 81 3R 52168 52259 GGATTATGGAATGGACTGATGG 58 52301 52319 GCATTGTCCCACAACACTG 59 NA Drosophila melanogaster 61 CG1103 FBgn0037235 FBtr0078909,FBtr0111220 1 2 2 90 3R 163947 163967 GGTGAATTCAACTTCGGACTC 59 164016 164777 CAAAGGTATACACATCAACCGA 58 NA Drosophila melanogaster 61 5-HT2 FBgn0087012 FBtr0112871 2 1 5 81 3R 454056 455894 CAAACCTAATGGACAGTAGCC 58 455937 455955 GTCGGGTAACCCAATTGTG 58 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 2 3 3 95 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526040 526889 CATGGTCGCTCATAACACTG 59 NA Drosophila melanogaster 61 UbcD6 FBgn0004436 FBtr0078849,FBtr0301663 1 2 2 80 3R 776120 776203 TTAACATCCATACAGTCACTGC 58 776061 776079 TTCTTTATACAGCTGGGCG 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 CG1161 FBgn0037313 FBtr0100434 2 1 2 80 3R 1181950 1182158 GCTCAACTAGATGAACCAACG 59 1182200 1182218 ACGATTGAGGACATTGGCT 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 1 3 4 80 3R 1388740 1388758 CCCAGAAACCAACTGTCTC 58 1388608 1388698 GGTGTTGATCTCAACTTTGGT 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 3 3 12 93 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586600 1586620 GTTCTTGCTGTTTAGGGATCG 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 2 5 5 86 3R 1684299 1684375 TCTTCTTCCAAGCCAAGGT 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 1 5 5 85 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684231 1684249 GAATGCTGCCTATGTGGAC 58 NA Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 1 1 1 128 3R 1936680 1936698 GTTCCTGATCTGCAGTCAG 58 1936078 1936096 GATGAATACCGTTCCAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078601 1 1 2 115 3R 2091005 2091026 GCCAAGTAACAAACTATTGGCA 59 2091102 2092139 CAGAGCCTAGACAGTCCAC 59 NA Drosophila melanogaster 61 CG10267 FBgn0037446 FBtr0081728,FBtr0302383 3 2 2 80 3R 2283140 2283223 CTCATACAGCAATCTGAACGAC 59 2283264 2283282 TAGGCCATGTTGAGTTCGA 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 3 4 11 88 3R 2735065 2735083 GATCAAATGTCCGGTCACC 58 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 2 6 11 80 3R 2724256 2734249 TTGGTAAGTGTCAAGAACGC 58 2724195 2724216 AGTGAAACTCCTTCTCTAGCTC 59 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082004,FBtr0082003 3 2 5 103 3R 4858906 4858924 AGATCAAGAAGCGCTTTGG 58 4849488 4849506 GATGTTGTCGCCATGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 1 5 5 229 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847653 4847671 GATGGGATTCTCGTAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 3 2 2 80 3R 4865807 4865903 AAATATGGATCCGGTAAGAAGG 57 4865943 4865962 CATCACATTCTTGAGCAGGT 58 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 2 2 2 80 3R 5158579 5158662 TAAACAGCTATATGCCCTTTCG 58 5158520 5158538 AGGTATAGCTCACCCTTCC 57 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082051,FBtr0082052 1 2 4 97 3R 5216677 5216695 TAAGTTGACCCACCTCTCG 58 5199588 5216616 CGTCGGTGAGATGATTCAG 58 NA Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052 1 1 4 88 3R 5198288 5198485 AACAGCAGAGATCCAACTCC 59 5198219 5198237 ACGCAAGAGGGTCAATACC 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 2 14 14 83 3R 5271544 5271562 TGTCCATCAATCTGGGCTC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 CG8147 FBgn0043791 FBtr0082060,FBtr0100522 1 2 2 96 3R 5320657 5320736 TGGAGGAGAATCCTCACAC 58 5320796 5320814 CTTGTATCGACCTCCTCCG 59 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 1 3 3 88 3R 5399131 5399149 GTACAACGGGATGATTGGC 59 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833 2 1 4 72 3R 5521142 5521160 CTCCTACCACTATCCGCAG 59 5520522 5521109 GCAACTAATTATCGAATGGGAC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 1 3 4 70 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520885 5520903 GATAGAACTCCGACCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 3 1 1 61 3R 5640069 5640090 TTCCAGATCCTTTACAATGGTC 58 5640176 5640195 TTCAGGACAAACAGGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 1 2 2 122 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175608 6175626 CGGCTTGATGTTCGATGTG 59 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 1 2 2 81 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515483 6515979 CCCAGAATTTGGCATCTGG 58 NA Nonspecific Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 3 7 7 99 3R 6692602 6692621 GTTACGGTGAACAAGGAGGA 59 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082470 2 2 4 80 3R 7614046 7614179 CGAGAGTTTATCCCATACGG 57 7614221 7614240 TCAATCTCCGTGTTAACCAC 58 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530 3 1 2 88 3R 7620447 7620529 CGCAGAATCGAAATCTCATACTC 59 7620381 7620400 ATAGCTGATGTGAGCCAGAG 59 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 1 2 6 120 3R 7628395 7636087 TGATGTATGGTCGCTATACCA 58 7628047 7628313 CCCAGCAGTTCCTTATTCC 57 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0301023,FBtr0300622 3 2 6 121 3R 7628396 7636088 CTGATGTATGGTCGCTATACC 57 7628047 7628313 CCCAGCAGTTCCTTATTCC 57 NA Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082510 1 2 3 80 3R 7791205 7791284 TGGATGAAGATCAAGATGAGGA 58 7791146 7791167 CTTAGTGTCTAATAACCTCGCC 58 NA Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 3 3 3 102 3R 7792838 7792919 CAGATGCAATCCCTGAATGC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 1 15 15 80 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812486 7812568 TTCCACATTATTCTCCTGCTG 58 NA Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 3 2 2 81 3R 8866925 8866943 GTCCCTGTCATCTGTTGTC 57 8866806 8866883 CATTGTACTCCTGACATTTGGT 58 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 3 4 6 155 3R 9203380 9203627 AAAGATAACGGCCAAGAACG 59 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112622,FBtr0112621 1 2 5 149 3R 9582375 9582913 TCAGATCAGGAATCGCCTG 59 9583026 9583044 TTGACCATGTTGTCCACCA 59 NA Drosophila melanogaster 61 btsz FBgn0053555 FBtr0273199,FBtr0091530,FBtr0273200 2 3 7 96 3R 10651024 10651043 CTCTGTTTCCGAGGATTCTG 58 10650886 10650965 TTTCTTTGTGGGCTGAGTG 58 NA Drosophila melanogaster 61 CG6904 FBgn0038293 FBtr0083037 3 1 3 151 3R 10970954 10971051 TACGCTCTGAGGATGAATCG 59 10970822 10970840 GTGTAAATACCGCCCACCT 59 NA Drosophila melanogaster 61 Gyc88E FBgn0038295 FBtr0083027 2 1 3 134 3R 11014895 11014914 AATTTACACCGGAGGAACTG 57 11015011 11015101 CATCCAGACTGCTGTTCAG 58 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052 1 1 2 101 3R 11051629 11051698 CGATAATGCAGCGGAATCC 59 11051763 11051781 ACCAGATCGTACAGGAACG 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 1 2 13 120 3R 11127370 11127391 GAGACGCAAATCAAAGTATTGG 58 11128938 11129374 TGAGCAGGTCATCTTCGAG 59 NA Drosophila melanogaster 61 Arpc3A FBgn0038369 FBtr0300571,FBtr0300570 3 2 2 176 3R 11660801 11660929 AAATCAAGTCCGACGTGGA 59 11661069 11661087 CATAGACGGCGTTCAATGG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083210,FBtr0083204 1 5 8 101 3R 11780837 11780855 TACTTCTACCGCGTCTCAC 58 11780920 11781722 CACTTCGTTGGCATCTTCG 59 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 3 3 3 90 3R 11928092 11928112 GCTCCGGAAGTATTAGATGAC 58 11928164 11928245 GACGACCACAGATCATCTC 57 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 2 2 9 80 3R 12121527 12122391 GATAGCTATACAATTACTCCACCG 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0300195 3 1 2 81 3R 12202033 12202054 AGTACTTCACGTACCATCATCC 59 12201781 12201993 TGGGTGGTGAGAATGATATGG 59 NA Drosophila melanogaster 61 CG14899 FBgn0038438 FBtr0083307 3 1 1 71 3R 12309015 12309034 TATCCTACACTGTCCAACGG 59 12308907 12308925 GTGCTCATTGAAGAGACGT 57 NA DesignNoJunction Drosophila melanogaster 61 Dad FBgn0020493 FBtr0100160,FBtr0083394,FBtr0083393 2 3 3 81 3R 12894608 12894696 CTTTGAAACCAATAGGGCTG 57 12894740 12894758 AATGCTGAAGTAGTCGACG 57 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290014 1 1 5 80 3R 12932048 12932067 CACTAATAGTTCCGGTACCG 57 12931521 12932006 CATTCATGATCACACCATGC 57 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 3 3 4 80 3R 13302771 13303278 CATCATAACGATAGCTCTGACC 58 13302712 13302730 AAGGTCCTGGATTCGTAGC 59 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 2 4 4 80 3R 13678782 13678802 ATCTGCAGATTGTCCTTTCTG 58 13678843 13683518 AGTTGCCGACCTTAAATACG 58 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 3 5 6 81 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 1 2 2 91 3R 14509016 14509034 TCTGTCCTATGTTGCAGCC 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 2 3 3 88 3R 15480771 15480789 GAATGTCTTCTCGCTGCAC 59 15480636 15480724 CGTAAATCATTCCCAATCTACCAG 59 NA Drosophila melanogaster 61 CG6184 FBgn0038725 FBtr0083802,FBtr0290269,FBtr0083801 2 3 3 88 3R 15480771 15480789 GAATGTCTTCTCGCTGCAC 59 15480636 15480724 CGTAAATCATTCCCAATCTACCAG 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 2 2 8 80 3R 16146586 16147206 GAACGTGAAGGATTTGGACG 59 16147249 16147267 GATTCGGATTCCGACTCCA 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 3 2 16 158 3R 16980784 16980964 ATGCCCACGTCTAATTATGG 57 16981085 16981103 GATGTCGAAGTCCCATTCG 58 NA Drosophila melanogaster 61 SIFR FBgn0038880 FBtr0301815,FBtr0084098,FBtr0084099 1 3 3 93 3R 17109863 17109881 TGATGTGCAAGTTTGTGCC 59 17106317 17109806 ATGGCAATGAACCTGTCCA 59 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 1 3 3 80 3R 17447412 17448545 TTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407,FBtr0100089 3 2 2 102 3R 17564788 17564809 TCTACGATCATTGGATTGTGTC 58 17564645 17564728 CTGTATGCATGTTGCAATTTCC 59 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 3 2 2 80 3R 17585746 17585821 ATGGCTCATCAGCTCTATCC 59 17585862 17585882 ATCCGTTCCAAATATCAGCTG 58 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 3 2 3 81 3R 17693173 17693192 ATCGAAACCATGGAGATGGA 58 17692971 17693129 AGTACCGCTGTATGACCTG 58 NA Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 2 2 2 87 3R 18917605 18917623 AAGTGGGAGAACAACGAGG 59 18917674 18917786 TGCAAACGGTGTAATCCAC 58 NA Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368 3 2 3 86 3R 18946200 18946218 TGTGGGATCTACAACAGCA 58 18946268 18946348 TGTTCATCTCCTGGAAGCA 58 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0301859 1 2 3 120 3R 19343883 19343901 CACATGAAGGAGTGGAAGC 58 19341199 19343799 AATTGCGAGATCCTTTGGC 58 NA Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 2 2 2 109 3R 19585010 19585092 TCATGATGAAGAACGGATGGA 59 19585163 19585181 GTAGAATAACCGGAGGGCA 58 NA Drosophila melanogaster 61 CG10219 FBgn0039112 FBtr0084466 2 1 1 60 3R 19585715 19585733 CATCTCTGTCGTCATCCAC 57 19585612 19585630 CCGCATGTAGTCAACTACC 58 NA DesignNoJunction Drosophila melanogaster 61 Lsd-1 FBgn0039114 FBtr0084456,FBtr0084455,FBtr0084457 1 3 3 81 3R 19591779 19591860 ACATACCCAGAAACCTGGC 59 19591904 19591923 GAGATTGTGATGATGCGGTG 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0300963 2 1 5 90 3R 19803254 19803272 ATTGGAGCTGATCTCCAGC 59 19803324 19803404 TACATACAAACCAGGCAAAGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 2 4 6 92 3R 20079843 20080373 CCCAAACAAATTGATCAGATCC 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301370,FBtr0084636 2 4 6 92 3R 20079843 20080373 CCCAAACAAATTGATCAGATCC 58 20079772 20079790 TCCGAGTACTTCCACTTGG 58 NA Drosophila melanogaster 61 CG17780 FBgn0039197 FBtr0084621 2 1 3 81 3R 20209177 20209260 CGTATTTACACTGGATGAGCAC 59 20209117 20209135 ATGGCTGTGCATGATTTGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100623,FBtr0100629,FBtr0100633,FBtr0084683,FBtr0100638,FBtr0100635,FBtr0084685,FBtr0084684,FBtr0100627,FBtr0100631,FBtr0100636,FBtr0100634,FBtr0100622,FBtr0100637 2 15 18 125 3R 20505298 20512927 AGACATATTGTGGTATGCGGT 59 20513014 20515056 ATCGGGTGGTTTACGATGG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581,FBtr0100634 1 3 18 149 3R 20528896 20528914 CACCACATGAACAACACGG 59 20529027 20529628 ATCATTCTCTGGTGGCCTG 59 NA Drosophila melanogaster 61 CG3744 FBgn0039240 FBtr0084726,FBtr0084725,FBtr0084727 2 3 3 80 3R 20700373 20700446 CAGGATACAATTCTGGGCTG 58 20700312 20700330 GACAAATCTGCGGATCCAG 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089983 2 1 6 100 3R 21182017 21182036 AATCAATGGCCCTTCATGTC 58 21181791 21181954 AGAGCATGGCCCATATAGC 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 3 3 3 96 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717749 21718181 ACTTCGTTGCAATGTCTCG 58 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084953 3 1 3 96 3R 21817554 21818534 TTCCCACTCTTCAGGAACG 59 21818594 21818612 GCTTGAATGGACAGGTCAG 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 1 2 10 85 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424358 22424376 ATCACATCTTGTGCCTCCA 59 NA Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085085 3 1 2 124 3R 22777614 22778737 AAGGATAACGCGGTACTCC 59 22777508 22777526 CAAACATCTCCTGCAGGTC 58 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564 1 1 3 80 3R 24027967 24052465 GGAGAAATATCAGACTGCAGAG 58 24052505 24052524 CTTGACAAAGCTGACAAAGC 58 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0300606,FBtr0300607 3 2 3 132 3R 24027913 24027931 GATCTGAGTGCCGAAATCG 58 24052504 24060800 CCTCCGCTTTCTTAAAGCC 58 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 2 2 4 81 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350956 24350974 AGTGTCGTAGTACCAGCTG 58 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0301306 1 1 3 105 3R 24518596 24518615 TGCTCTCCATCTACAAGTGC 59 24518681 24518906 CTTGTCCATCTGAAGTTCACG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299742,FBtr0299749,FBtr0299744 1 7 13 119 3R 24726634 24726652 AAATACCGCTACAGGGACG 59 24726735 24745222 CTTTGCTGTCTTAGCCTGC 59 NA Drosophila melanogaster 61 Pglym78 FBgn0014869 FBtr0100482,FBtr0100483,FBtr0085384 2 3 3 87 3R 24975219 24975304 CATTTAGACAACCTTTCTGAGGAC 59 24975350 24975368 TGAAGTTCTCGTCCAGCTC 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0110981 3 1 5 84 3R 25245685 25250157 TTATTATCGAAACGCGGGAG 58 25250202 25250222 TGATATGACGTCGCATTTGTC 59 NA Drosophila melanogaster 61 CG7834 FBgn0039697 FBtr0085535,FBtr0085536 1 2 2 99 3R 25628533 25628551 TTTGGTTGGAGTTAAGCGT 57 25628322 25628340 ATTCATCGAGTGCTTCACG 58 NA DesignNoJunction Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085621,FBtr0085619 3 2 3 158 3R 26134963 26183984 AAGTCAAGATTGAGGACGAGG 59 26184104 26184122 AGAAGGAGCCATCAACCAG 59 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 2 3 3 77 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215048 26215434 TTACAAATGGAGTTGGCCG 58 NA DesignRelaxed Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 1 3 3 80 3R 27400375 27400394 AGCTACCCTACAACGATCTG 59 27400435 27400531 CAAAGGTGGCTATGGAATTGG 59 NA Drosophila melanogaster 61 CG2118 FBgn0039877 FBtr0085855,FBtr0085856 3 2 2 89 3R 27617577 27617595 AGGATCCATTTGTTGCCAC 58 27617451 27617527 CAGAATAGACCTTCTCATTGGC 59 NA Drosophila melanogaster 61 Cec2 FBgn0000281 FBtr0089614 1 1 1 98 3R 26038671 26038689 TTAACTTGCAACACTCGCA 58 26038790 26038808 CAATGACCTCCAATGCTGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 3 8 8 168 4 157779 157853 GTCGAGCAACCTTAAGACAC 59 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0089116 2 1 7 83 4 255556 257026 TCGCCAATTAAGCCTAATGTC 58 257068 257089 CGAATCATGGTCTGCTTTAGTG 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089063,FBtr0089065 1 7 7 100 4 473429 473449 GATTTCTGGAAATGAGGCCAG 59 473511 473610 CGTAGTAGGCTTGCTTCCA 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300343 3 2 3 80 4 502324 502448 ACTATGCGTTCCAAACGAC 58 502262 502282 TGATCTTGTTTGGAAGAAGGC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 2 2 9 102 4 1065793 1065814 CTAGCACTACTCTTGAAGACGA 59 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089193,FBtr0089195,FBtr0089194 3 3 3 96 4 1150102 1150200 GTTTACAACATTCGACTTGGAG 58 1150255 1150275 TTTGCTATCGACATCTACCAG 57 NA Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 2 2 2 80 4 1216413 1216484 TAAAGCAATACCATCCGTACG 58 1216353 1216373 CAGTGATACGATACATTCCCA 57 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 3 5 5 81 4 1230676 1230694 CCAAGTAGCTCAAGTGGCT 59 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 2 2 2 80 X 40880 40956 AGCCAGAAAGTACTTCAAAGC 58 40820 40844 GATATTATACCAGAAATGCTCCACG 59 NA Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 3 3 3 99 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242176 242194 GCTACTGATGTGGCATCTG 58 NA Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070167 3 1 3 180 X 829790 829808 CTTGGAGTCTCCCAGTGTG 59 830442 830461 TTCTGGATCACAAACTCGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0070308 1 1 2 95 X 1760089 1760107 ATGAACAACCGCTTCTTGC 59 1760165 1760254 GAGTCCCTTTAGTCTGTGCA 59 NA Drosophila melanogaster 61 wapl FBgn0004655 FBtr0070430,FBtr0070429 3 2 2 101 X 2045867 2045957 GCATACTGGTTCTTACACTGC 59 2045786 2045804 TATCCGCTACGTACTCTGC 58 NA Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 2 2 2 145 X 2146890 2146963 GAAGTCCGCAACATGATCC 59 2146763 2146781 TCCCTGATGGACTGAATGC 59 NA InUTR Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091965,FBtr0070451 1 3 8 80 X 2385226 2385245 GGAGATACGTTCAAATCGCA 58 2384863 2385184 CCAACGTCGTTATCTAGTCC 57 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 2 2 12 179 X 3208474 3208495 TATGTGCTCCGATCTAATGACC 59 3208635 3215085 TCTACATCGAAACTGCCCG 59 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 1 8 8 80 X 3679516 3679633 CGGGAACCTACTGGTATCTG 59 3679675 3679694 ATACGTCCACTTTGGAGGAG 59 NA Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 1 2 2 84 X 4432734 4432817 AATCATGACGAACACGTGG 58 4432668 4432686 TAATCTCAAAGTGCTCGGC 58 NA Drosophila melanogaster 61 l(1)G0334 FBgn0028325 FBtr0070708,FBtr0070710,FBtr0070709,FBtr0070711 1 4 4 152 X 4598143 4598236 AACAACTACGGAATGGGCA 59 4598350 4598370 AGTGTTCACATAGTTGATGGC 58 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 2 3 4 80 X 5214528 5214600 AAATAATGGGCTATCCGGG 57 5214466 5214485 CACCATTGTATTCGCTTTCC 57 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301953 2 2 7 81 X 5277607 5277625 CGGGAACGGTTCTATTGGT 59 5277667 5288094 TCATGAAATCTTTCGCACTGAC 59 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 2 3 3 81 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309886 5309905 AATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300466 1 1 3 80 X 5527488 5527911 CATATCAGGAAGCACCCGT 59 5527426 5527446 GATCACTATGGGTTGTCTTGC 59 NA Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300466 3 1 3 87 X 5527488 5527911 CATATCAGGAAGCACCCGT 59 5527419 5527437 TGCGTCAGATCACTATGGG 59 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301084 1 1 2 191 X 5601292 5601310 AATGTCAGCTACCAGGGTG 59 5601527 5601605 AATCGCAACCAACTTGCAG 59 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 2 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 1 3 3 60 X 6772497 6772516 GAGCTCTACAAGGCAAATCG 59 6772600 6772619 TGTAGTTGCGATCGTACTCC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 16 21 282 X 6978841 6979198 TTTGTTCGGTACAACAAGCG 59 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 ct FBgn0004198 FBtr0071069 2 1 3 94 X 7526359 7526803 CCAATTGATTGGTAATACTCCC 57 7539842 7539860 TAGCTGCTCTTTGAGTGTG 57 NA InUTR Drosophila melanogaster 61 CHES-1-like FBgn0029504 FBtr0071079,FBtr0112946 1 2 2 80 X 7581776 7581865 CGCCATATAGCTTTAGTTCCT 57 7581716 7581736 CATAGATCTCTTTAACGGGCA 57 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 3 6 6 81 X 7879379 7879474 ATCTGCATAAGATCGCAGC 58 7879519 7879537 AATCGGTTCCATCATCCAG 57 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 2 4 5 80 X 8404724 8406391 TTTCAATGGAAACGATCCCG 59 8406430 8406452 GTGATGATTGAGCTTAGTGAACC 59 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 2 4 4 80 X 8458342 8458361 GAGATCTTTGGCTCCTTTCG 58 8458402 8458530 CTTCTCCCACAAACCTAACAC 58 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0273354 3 1 2 96 X 9647337 9647592 GTTAACATCACAGCTAGTCGC 59 9647650 9647668 ATGACTGTGATCCAGAGGC 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071409 3 1 3 141 X 9859800 9859883 GATTGTAGCCTAGACATTGAGC 59 9859984 9860003 AAACAAAGAACGGTTCCACG 59 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 2 4 4 117 X 10676326 10676423 AGTACAAGCAGGTCTTCCT 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 1 3 4 96 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055153 11055176 CATTGTCGCCTAATACTAGTACAG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 3 2 10 88 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848303 11856054 GATTGAGTTCGAATCGTGCC 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 2 6 7 81 X 12168211 12168229 ATTCCCGTTGCGTAATTCC 58 12168271 12170563 GCGTTTATCTATGTGAAACCTG 57 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 1 2 5 85 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483127 12483145 AATCACTAACTGGTGTGCC 57 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300376,FBtr0073679 1 2 6 89 X 12534792 12534810 GATCCTTACTCGCGAACAC 58 12534863 12542578 GCCGTTGATCTGATCTGAG 58 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 1 5 10 105 X 13493486 13494113 GAAGAGTACACCAGCTCCG 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 1 4 4 80 X 13696193 13696278 ATCTCAAGAGCTTGGTTATCC 57 13696320 13696338 CAGTGGTGTAGTAATGCCC 57 NA Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 1 1 1 68 X 14138047 14138065 GATCCTCGACCTCAAGTCG 59 14139309 14139327 AAACAGACGATCACAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 3 1 1 90 X 14138025 14138045 TCATTCAGGAGAATCTCAACG 57 14139309 14139327 AAACAGACGATCACAGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG5541 FBgn0030603 FBtr0073958,FBtr0073959 3 2 2 104 X 14944077 14944097 TTGAGCTAATGAAGCCTTTCG 59 14944161 14944242 TCTTAAAGGCTTGACTCTCGA 58 NA Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0289961 3 1 2 187 X 15569823 15570402 TTACTTAAGTGCCTCACCCA 58 15570552 15570570 TTCCTCTTGAGTTTGCCAC 58 NA InUTR Drosophila melanogaster 61 CG32582 FBgn0052582 FBtr0074102,FBtr0113440 3 2 2 105 X 15730152 15730173 CAACAACTTTAGGATTTGCTCC 58 15730239 15730330 CATCCTTTGTCATGCCCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8924 FBgn0030710 FBtr0074131,FBtr0074130 1 2 2 194 X 15837145 15837163 TCTAAGGCCACCTCTACGA 59 15837321 15837398 AAGCTGCATTTGCATCCTC 59 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 2 3 3 81 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965137 15965155 GCTTGCGATAGTTGATGGC 59 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 1 5 5 83 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179125 TCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 2 3 4 91 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190083 16190106 GGGTCATATCGATATTATCACTGG 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 2 6 9 187 X 16270360 16270691 AACAGTGGTATCTGAATGGC 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 2 5 5 109 X 16277019 16277037 TCACCGATCCCGTATAGTC 58 16276866 16276946 ACAAAGTTGTGCAAGTCCT 57 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300034 1 2 4 120 X 16603927 16603945 GGGCTACTACAAAGTGGAG 57 16604101 16604245 CACCAGATACTTTGAGGGC 57 NA Drosophila melanogaster 61 CG13004 FBgn0030797 FBtr0112996,FBtr0074351 1 2 2 80 X 16721628 16721717 ATGCCACATATCAACTCCCA 59 16721567 16721585 GAACTTGACCACGCTTTCG 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0300436 3 1 3 231 X 17385715 17395031 ATGGAGATGGTGAGTAACTCC 59 17358808 17358826 CAATGAACGAGGTCTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 3 2 6 80 X 17785900 17785922 CAAGTCGAGATCAATACGATAGC 59 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 1 3 8 97 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824462 17824629 AATGTTGACCTAGTGCACCA 59 NA Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0074684 2 1 2 156 X 19178847 19191162 TTAGTTTGGTCAACCTGGC 58 19178709 19178727 GGTCCCACAAATAGTCCAG 57 NA Drosophila melanogaster 61 Grip84 FBgn0026430 FBtr0074775,FBtr0074776 3 2 5 111 X 19455821 19456454 ACTGCCCACAGATTGAGAC 59 19455728 19455747 TTGATCTGCTTGAGGAACGA 59 NA Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839 3 1 3 86 X 19793929 19793947 GTCTTTCACGTTCCTGCAG 59 19793995 19794658 TGATAGTAACCTCTTCCCAGC 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569 2 3 5 80 X 20663682 20663702 CTGATCACATTCTCGATTGCT 58 20663562 20663644 GGGAATGTCTCTTGTATGTACAC 59 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 1 8 8 80 X 21254403 21254490 GCATTAAGCTGATGAAGGACTG 59 21254531 21254549 GTACGGTGTCTTCGTTGTG 58 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 2 5 5 96 X 21473853 21474022 AATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 2 2 2 85 X 21879073 21879091 GGTACTGACCATCCTGGTC 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 3 2 2 87 X 21879075 21879093 CTGGTACTGACCATCCTGG 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 CR32658 FBgn0040859 FBtr0073628,FBtr0073626,FBtr0073627 1 3 3 76 X 11985504 11985522 ATACACCAACTGAGTGCAG 57 11985623 11985641 GTGAACGGGATTCACTAGG 57 NA DesignNoJunction Drosophila melanogaster 61 snmRNA:128 FBgn0065107 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:430:CR33728 FBgn0053728 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30225 FBgn0050225 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-1175b FBgn0083004 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32289 FBgn0052289 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-G3113a FBgn0086065 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-276bS FBgn0082179 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:84Fe FBgn0011963 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:ND3 FBgn0013681 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41506 FBgn0085789 FBtr0114242 1 1 1 158 YHet 338145 338235 TGCTAAACTACAACTCACCC 57 338354 338374 ACCTTTCCTGGTAAATTCCTG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1135d FBgn0083009 FBtr0113572 2 1 1 78 X 17040201 17040219 ATTCCATCCCAGCTAAGGC 59 17040141 17040162 GGCTTAATCTTCAAGCACTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 2 2 2 60 X 21241700 21241718 AAGAGACATCGCGGTATCG 59 21241742 21241830 TTGTAATGGCACGGTTCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077242 1 1 2 82 X 20913642 20913660 ATTTACACGGGTCTCATGC 57 20914738 20914756 AACTTGACCTTCAGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11229 FBgn0031138 FBtr0077282 1 1 1 60 X 20782757 20782775 CTGATGACGACAAAGACGC 59 20782796 20782817 AGAAATACGTAGGAGATGGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42577 FBgn0260867 FBtr0301567 3 1 1 204 X 20130375 20130393 AATTGGAAGCAACGAGGTC 58 20130558 20130579 GATTAAACATAAGAGGCGAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 3 2 2 148 X 20118059 20118077 CAGTTCTTCCTCTGCACCA 59 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific Drosophila melanogaster 61 CG33491 FBgn0053491 FBtr0089603 1 1 1 100 X 20073574 20073592 GAGTACAAGGAGCTCTCCG 59 20073406 20073510 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 skpD FBgn0026174 FBtr0074796 1 1 1 60 X 19707136 19707156 CTTGTTCGAAATTACAGTGGC 58 19707178 19707196 ACAGAGATCCTCTAGGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074815 1 1 3 73 X 19635234 19638315 CGTACTCTCGTAACAACAAAGTC 59 19635183 19635201 GTCTGACGATTTGTCGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14216 FBgn0031054 FBtr0074747 3 1 1 99 X 19558891 19558973 CAAGGACAAGGAGTTCTACAC 58 19559033 19559052 CTCTTTGGTGTCCTGAAACC 58 NA Drosophila melanogaster 61 Tyler FBgn0031038 FBtr0074735,FBtr0074736 1 2 2 80 X 19506166 19506185 CAGTGATATCTGTGTCCCGA 59 19506228 19506334 TTGACAAAGGCATCCATGG 58 NA Nonspecific Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718 1 1 8 84 X 19398495 19398513 TGCGATTCGTTGTGTTCTC 58 19398561 19400527 TTCCTTCTGCTGGATCGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 1 2 8 70 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19392909 19400529 TGTTCCTTCTGCTGACAGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mRpS14 FBgn0044030 FBtr0074785 1 1 1 94 X 19373888 19373906 AATTCTCTGGCCAGGATCG 59 19373752 19373772 TTCCAATCGGCATACTTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32533 FBgn0052533 FBtr0074786 2 1 1 91 X 19370372 19370458 GTTGCTCTGTTACCAGTCG 58 19370299 19370317 TGAAGAGCAATAGCGTCTG 57 NA Drosophila melanogaster 61 Hs3st-B FBgn0031005 FBtr0074676 2 1 1 80 X 19143291 19143311 CTGGTCTACTTCTCCTACAGC 59 19143353 19143786 ATTGCGTAAGTTGCTCTGC 59 NA Drosophila melanogaster 61 CG7280 FBgn0030966 FBtr0074655 1 1 1 80 X 18741341 18741423 CCGTAAAGGGTCTTTCATGG 58 18741280 18741300 CTCTTAGAATGTCGCACAGTC 58 NA Drosophila melanogaster 61 CG15046 FBgn0030927 FBtr0074628 3 1 1 124 X 18382012 18382087 AGGGTGAAGACACTGACTG 59 18381906 18381924 CTCCACGCAAAGATGTGAG 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 3 1 7 160 X 18007408 18007491 AAGAAACTCAGGTTGCTGC 58 18006671 18006692 TGCTTGATCAGAGATTTGAGTG 58 NA Drosophila melanogaster 61 CG7135 FBgn0030895 FBtr0074515 1 1 1 82 X 17998608 17998789 GGTGAAGATTATTGACTTCCAGC 59 17998831 17998849 GTTCCAAGCTGGTGTTCAG 59 NA Drosophila melanogaster 61 CG8188 FBgn0030863 FBtr0074476,FBtr0100463 1 2 2 112 X 17595800 17596244 TCATGAGTTCGCAATACTCGA 59 17595708 17595726 TAGCACCTTGATGCCTTCC 59 NA InUTR Drosophila melanogaster 61 CG12990 FBgn0030859 FBtr0074479 2 1 1 94 X 17563794 17563815 GCCATCTACCTATTGAATCCGA 59 17563651 17563741 GCCAGCATTATCATCATGGTG 59 NA Drosophila melanogaster 61 CG12998 FBgn0030829 FBtr0074394 3 1 1 103 X 17113025 17113043 CATTGTACTCTGCGCACTG 59 17113110 17113128 CACTATTCCATCCGGAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 xmas-1 FBgn0016080 FBtr0074405 3 1 1 84 X 17046954 17047151 GAGATGCCAGATGGTTTGG 58 17046888 17046907 AGGCATTCGTACCTTATTGC 58 NA Drosophila melanogaster 61 CG9723 FBgn0030768 FBtr0074376 3 1 1 80 X 16548217 16548235 GATTCTGATCACCTACCGC 57 16548088 16548173 ATGCGATAGCAGATCAGGA 58 NA Drosophila melanogaster 61 mthl1 FBgn0030766 FBtr0074314 1 1 1 155 X 16537396 16537415 GATTACACAGAACACCACCA 57 16537530 16541810 CTCAGTTGTGTTTAGCAAATGG 58 NA InUTR Drosophila melanogaster 61 Lcch3 FBgn0010240 FBtr0074129,FBtr0074127 3 2 2 95 X 15820922 15820940 GAGATTCACCACGACCCTC 59 15820994 15821423 GTGTATCCATAGCTCTCAATTTCC 59 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 1 4 4 84 X 15769164 15769182 CTAGATTTAGGCGATGGCC 57 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 2 3 3 98 X 15744650 15744668 TAACCTTAGGAGCACTGGG 58 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0074101,FBtr0074100,FBtr0112827,FBtr0074099,FBtr0112824,FBtr0301543,FBtr0301544,FBtr0112825 2 9 9 80 X 15717653 15717671 ATCACCGGCATCTATTCGT 59 15717712 15717803 TTTGCCGTATATCAACAGTCTC 58 NA Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0074052 1 1 2 200 X 15569572 15569590 GTTGAAACGCAACACTTGG 58 15570428 15570448 CTTGAGCATCTTCTTTGTCTG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG8105 FBgn0030661 FBtr0074048 3 1 1 92 X 15482986 15483004 ACCCTCAACTATGCCATCG 59 15483060 15483142 TGTGTAGGATGTGGGACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG8105 FBgn0030661 FBtr0074048 1 1 1 127 X 15483059 15483141 TGAGTCCCACATCCTACAC 58 15483232 15483250 CAGATTCTGCTCCATGACG 58 NA Drosophila melanogaster 61 CG8097 FBgn0030660 FBtr0074047 2 1 1 80 X 15478658 15478743 GTTCTAGAGGATGATGTTGACTG 58 15478780 15478801 ATCCATTATGGACTCCATTAGC 57 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 2 2 2 90 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403813 15403832 TTGTCAATCTTGTCCGTCTG 58 NA Drosophila melanogaster 61 Grip128 FBgn0026433 FBtr0074075 3 1 2 95 X 15365290 15365417 AGCTTAAGTGACTGGTCGG 59 15365213 15365231 CATTTCCAAGAGGCTTCGC 59 NA Drosophila melanogaster 61 CG32590 FBgn0052590 FBtr0073988 3 1 1 81 X 14732790 14732864 GAATACGGCATACAAGCGC 59 14732727 14732748 TTGAAGCCTTGATCATTTCCTG 59 NA Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 1 2 4 124 X 14726982 14727183 GTAATCCGAACGACAGCAG 58 14727268 14727289 CATTATTTAGTCGGTGGTACGT 58 NA InUTR Drosophila melanogaster 61 CG32595 FBgn0052595 FBtr0073941 2 1 1 81 X 14612774 14612795 TACGACAATATGTCCGATATCC 57 14612655 14612732 CATGGATGGATTCCAGGTC 57 NA Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073931 1 1 3 158 X 14474872 14474963 ATCACCGAGTTTCAACTCCT 59 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA Drosophila melanogaster 61 Ste:CG33243 FBgn0053243 FBtr0300092 2 1 1 110 X 13946055 13946073 TCTGATACACAGCTGGACG 59 13945903 13945981 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG15756 FBgn0030493 FBtr0073783 1 1 1 80 X 13429298 13429316 GAAGTGAATGAGGCTGAGG 57 13429358 13429686 GTTTACAGCATTAGGAACCAG 57 NA Drosophila melanogaster 61 CG15753 FBgn0030491 FBtr0273441 1 1 1 82 X 13415150 13415168 AGATGATGACTAAGGCGGC 59 13415214 13416802 GACAAACAGCGATTCCCTC 58 NA Drosophila melanogaster 61 CG1681 FBgn0030484 FBtr0073778 1 1 1 80 X 13302537 13302555 CCACCACGGAGTATTTCCA 59 13302598 13302698 CGAGATTCACCGCATTATCG 59 NA Drosophila melanogaster 61 CG1622 FBgn0030468 FBtr0073757 3 1 1 84 X 13192776 13192796 CCTTTACGACTGGTATGAGGA 59 13192842 13192943 TCCGATGGTTAAGACCTGG 58 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0073798,FBtr0301299,FBtr0301298 2 3 3 81 X 13165568 13165587 TATCAACTCGTTTCAGGAGC 57 13164667 13165526 CACCGCAAATTGATACTTGTG 58 NA Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290203 2 1 3 187 X 13152216 13152427 GTACTACGACGGTGATTCG 57 13152047 13152066 TTGCATCTTTAGCATGTCCA 57 NA InUTR Drosophila melanogaster 61 CG15721 FBgn0030438 FBtr0073715 1 1 1 88 X 12864985 12865076 AACTGGCATAAACTGGGAG 57 12865127 12865146 CTGGATTGTACTGATCCTGG 57 NA Drosophila melanogaster 61 CG1492 FBgn0030361 FBtr0073579 2 1 1 73 X 11904717 11904735 AGTTTCAGTGACAAGCTCC 57 11904591 11904609 TAAAGATGACACCTGTGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG1837 FBgn0030329 FBtr0073551 2 1 1 82 X 11612792 11612871 AGTCATTGTCAGCGTTTGG 58 11612913 11612935 ATCTTCGAGATAGTTACGGTAGG 59 NA Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0073513 2 1 2 85 X 11471834 11471913 CGATCCGAATTACTTTAGGTGC 59 11471959 11471977 GATGGAAGCGTAGCATGTG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 1 7 15 107 X 11275918 11275936 TTGGATGACTCGAAGAGCA 58 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 CG11750 FBgn0030294 FBtr0073456 1 1 1 143 X 11253460 11253478 TATTCCGGAACTGCAATGG 57 11253651 11253669 TCGCTGAAATCAAAGTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 3 2 2 172 X 11005431 11005513 CCAACGAGGATCAGAAACTC 58 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 CG1537 FBgn0030260 FBtr0073394 3 1 1 97 X 10956485 10956717 CATTCGCCGTAACATTAACC 57 10956407 10956425 CATAGGGCTTCTTCAGCTG 58 NA Drosophila melanogaster 61 CG2145 FBgn0030251 FBtr0073387 2 1 1 181 X 10821662 10821750 CACTTTCATTTGTCAGATGCCT 59 10821892 10821910 GATTTCGGACTGGTGACCA 59 NA Drosophila melanogaster 61 CG2887 FBgn0030207 FBtr0071459 2 1 1 60 X 10371728 10371747 TTATAATCCGGGACAAGCCA 58 10371687 10371706 GTGTACAGCAGATTGTTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42262 FBgn0259147 FBtr0299576 1 1 1 104 X 9762434 9765393 TATAATGCAGTCCAGCGTC 57 9762348 9762366 ATTGTAGAAGATCAGGCGG 57 NA Drosophila melanogaster 61 CG32699 FBgn0052699 FBtr0110850,FBtr0071369 2 2 2 80 X 9468294 9468389 GACCTGGAGTATTACGCCT 58 9468232 9468252 TGTACACAGGCAGATATTCGA 59 NA Drosophila melanogaster 61 CG17446 FBgn0030121 FBtr0071327 2 1 1 88 X 9166630 9166710 CAGGTTCATGATAGGCTGC 58 9166560 9166580 GTTTGATGTGTTTAGCCTCCT 58 NA Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071339 3 1 2 81 X 9090160 9090237 CCATCCAAGATTCTACGCA 57 9090097 9090115 CCAGATGGTACCCAATACG 57 NA InUTR Drosophila melanogaster 61 CG6999 FBgn0030085 FBtr0071288 3 1 1 80 X 8982732 8982753 CTGAAGGAAATCATGAACTTGC 58 8982791 8982885 CTTTGTCTTGAAACTTGACAGC 58 NA Nonspecific Drosophila melanogaster 61 CG12662 FBgn0030074 FBtr0071264 3 1 1 60 X 8878002 8878021 CGTACACTGTACAATGGCAC 59 8877961 8877981 ATACGTGGCGAATGTATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1785 FBgn0030061 FBtr0071250 2 1 1 154 X 8610276 8610357 CCTGATACGCATCAAATCGA 58 8610474 8610492 TTACGTCTAGGTCTGGCTC 58 NA Drosophila melanogaster 61 CG32713 FBgn0052713 FBtr0071243 2 1 1 63 X 8351277 8351299 GTTATGTTTACACTGATCGGTGG 59 8351236 8351254 GATTGACTAGGCCACCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRalpha-7E FBgn0015519 FBtr0289988 2 1 1 80 X 8180253 8180364 ATCAGCGAGATGATCAAATCC 58 8180193 8180211 CGGTGGTATTTGATCCCTC 57 NA Drosophila melanogaster 61 CG34337 FBgn0085366 FBtr0112539 3 1 1 130 X 7311349 7311367 ATTTATGGGTCAGAGCTGC 57 7311461 7311549 GTCTAAAGCCGGTAGTAGC 57 NA Drosophila melanogaster 61 brk FBgn0024250 FBtr0071048 3 1 1 60 X 7204396 7204416 AACTACAGCCTCAATCTCCAG 59 7204435 7204456 GTTGCATGTACATCAGATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14431 FBgn0029922 FBtr0071002 3 1 1 60 X 6854380 6856214 ATTTACAAAGGGAACTGCTGC 59 6856236 6856254 GAGCCCTTTGAATCCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG6048 FBgn0029827 FBtr0070863 3 1 1 111 X 5846975 5847251 CCCATTGCTTTGTGGATCAG 59 5847325 5847343 AATGTTAGCGTGTTGGTGC 59 NA Drosophila melanogaster 61 Vsx2 FBgn0053980 FBtr0100024 2 1 1 101 X 5425473 5440771 AGGATCGCATACAGGTGTG 59 5425390 5425408 CATAGAGACCGTACTCGGC 59 NA Drosophila melanogaster 61 NAAT1 FBgn0029762 FBtr0070797 1 1 1 80 X 5301719 5301792 CTCTTTCTGATCGGCAAACC 59 5301658 5301676 CCAAATCTTCACCGTTCCC 58 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112950 3 1 5 106 X 4826657 4826677 AGTTGTTCTCCTCAACTAACC 57 4825758 4826592 CAAAGGACAACTCAGATAAACC 57 NA InUTR Drosophila melanogaster 61 CG3527 FBgn0029714 FBtr0070678 1 1 1 150 X 4446139 4446157 AAGCGTAAGTTTGTCGGTC 58 4446271 4446353 AAGTGTTGTGCACCTTCAC 58 NA Drosophila melanogaster 61 CG14421 FBgn0029644 FBtr0070554 1 1 1 78 X 2835654 2835672 ACTTCCAGATCTTCGGTCG 59 2835714 2835732 AACAGATCGGTCAGCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14419 FBgn0029639 FBtr0070564 3 1 1 60 X 2779747 2779765 CGTCTACAACCACTACGAC 57 2779705 2779723 GTTGTGGACTCTGACTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttm50 FBgn0250874 FBtr0070497 1 1 1 84 X 2624731 2624811 GCTTTCCTAAAGATAATTGCGC 58 2624668 2624686 TGATGGGATCGTCGAACTG 59 NA Drosophila melanogaster 61 CG2681 FBgn0024997 FBtr0070480 1 1 1 83 X 2603646 2603664 TCCTTCTGTGCAAGAGTGG 59 2603711 2604362 TGAAGGGTTCCTTGCAGAG 59 NA Drosophila melanogaster 61 crn FBgn0000377 FBtr0070418 1 1 1 204 X 2143910 2143928 ATTGCTAAGTGAGGGACCC 59 2143666 2143684 TGATAGTCTGCCAACTCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cyp4d2 FBgn0011576 FBtr0070387 1 1 1 83 X 2071022 2071040 ATGGTATATTGCCGGGTCC 59 2071081 2071192 CCATTATTTGTTCAGGATCTAGACC 59 NA Drosophila melanogaster 61 Cyp4d1 FBgn0005670 FBtr0070428,FBtr0070427 3 2 2 97 X 2053587 2053666 GCGAGATCAATGGAAAGCTC 59 2053509 2053529 GATATTGGGCTCGCTAAAGAG 58 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 1 6 7 79 X 1962454 1965408 AAGGAGAAGTCGACAGGTG 59 1962393 1962411 GTCGACATGGTTGTACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 east FBgn0010110 FBtr0070326 3 1 1 97 X 1912036 1912747 AGAACGAAGATTCGTCCCA 58 1912807 1912826 CGGAATGAGGATCTTCTCCT 58 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318,FBtr0070320 1 3 3 98 X 1823115 1823133 GACTGGAGCACTGAAGGAG 59 1823195 1823286 CTTCAGCTCGAAATCGCTG 59 NA Drosophila melanogaster 61 Pgam5 FBgn0023517 FBtr0070366 2 1 1 92 X 1767071 1767089 AAAGTGGTGAACTGTGCCT 59 1766931 1767015 AAGGAACTGAGATGCCTCC 59 NA Drosophila melanogaster 61 CG32806 FBgn0052806 FBtr0070301 2 1 2 80 X 1683704 1683772 GATGCAATTAGGCTGTCGC 59 1683813 1683834 CTGGCAATAATAGATTGTGGCT 59 NA Drosophila melanogaster 61 CG3795 FBgn0025378 FBtr0070278 1 1 1 108 X 1603805 1603888 TTGCATGTTCAGCAATCGG 59 1603715 1603734 CTCGGCCTCAATAATCTGTG 58 NA Drosophila melanogaster 61 CG11381 FBgn0029568 FBtr0070203 2 1 1 145 X 1097898 1097970 CTCAAAGCCGCAAAGATCC 59 1098078 1098097 TCCGATGGGAGATACTTGTG 59 NA Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 2 3 3 191 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654858 654876 CATCACTGGCATTCACTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Su(Ste):CR42412 FBgn0259843 FBtr0300137 2 1 1 94 U 6404934 6404952 GAATTTCTCTGCCACGTGC 59 6405010 6405028 CTTCAGGATCCGTCCAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41130 FBgn0069921 FBtr0100311 2 1 1 60 4 1223104 1223125 GCCGATAACATAGATAAAGCGT 58 1223143 1223164 CACAATCACAATCAGATGATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 2 2 2 80 4 1224346 1224365 AGCTCGTTACAGTCTACCTC 58 1224406 1224999 GAATGATGGTAGCTCAGAGAC 58 NA Drosophila melanogaster 61 Rfabg FBgn0087002 FBtr0089188 2 1 1 102 4 1093995 1094071 TTATTGATGGCATACGCACC 58 1094136 1094154 ACAATGGACTTCTGAGCCT 58 NA Drosophila melanogaster 61 pncr002:3R FBgn0063127 FBtr0091948 2 1 1 102 3R 2525626 2525747 ACGTAGAGATTTAACCCTTCTG 57 2525545 2525563 CAATTGGGTGTTGATGTGG 57 NA Drosophila melanogaster 61 CG15563 FBgn0039832 FBtr0085771 3 1 1 61 3R 27057882 27057900 GGCAACCAGGATTCAAACG 59 27057839 27057858 AGATCTGGACATTCAGGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15534 FBgn0039769 FBtr0085644 2 1 1 120 3R 26257903 26258142 TTTGTATCAGCCAGCATAGC 58 26258225 26258243 TCTTGCTGTGACTACTCCG 59 NA Drosophila melanogaster 61 CG42557 FBgn0260759 FBtr0301256 3 1 1 148 3R 25759288 25759364 TTTAAAGCTACTTGAGCGGA 57 25759475 25759493 CTAGCTCAAGGAACTGCTC 57 NA Nonspecific Drosophila melanogaster 61 CG31038 FBgn0051038 FBtr0085498,FBtr0085499,FBtr0085497,FBtr0085494 2 4 6 80 3R 25723359 25727915 AAGGAAATGAACGGACTGC 58 25727958 25727977 GAACTCTTGGATCGATTCGT 57 NA Drosophila melanogaster 61 Obp99b FBgn0039685 FBtr0085462 2 1 1 60 3R 25542475 25542493 TTCTCCTATTGGGTCTGGC 58 25542433 25542451 ACATAGTCGTGGTGATGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk20 FBgn0039676 FBtr0085466 1 1 1 80 3R 25492797 25492865 ATCTAATTGCCAATCTGGGT 57 25492736 25492756 GGTAGTAGATCAACTCGAAGG 57 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 2 3 3 80 3R 25073690 25073708 CTGAACCGACAACTTGAGG 58 25073565 25073647 GGTAACCGAGATCCATTTGG 58 NA Drosophila melanogaster 61 CG1458 FBgn0062442 FBtr0085405 1 1 1 200 3R 25048480 25048972 GCTCTCCTTCAAGGATTGGT 59 25048299 25048317 GCCTTCTCCGCAATATCCT 59 NA Drosophila melanogaster 61 CG11841 FBgn0039628 FBtr0085361 1 1 1 60 3R 24876864 24876882 AAATCCGGATCCATTTGCC 58 24876959 24876978 CTCTTCGAAGACAATCTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Acp98AB FBgn0013745 FBtr0089438 3 1 1 65 3R 23520632 23520650 CTGTTCTTAGCCGCATTGG 59 23520677 23520697 TCGTCATCCTTTGATAGTGTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dsd FBgn0039528 FBtr0301390 1 1 1 178 3R 23428658 23428744 ATAGCGATGAGGTGGAGTG 59 23428170 23428188 GAAGCCCTCGTAACAGGAG 59 NA Drosophila melanogaster 61 CG6296 FBgn0039470 FBtr0085078 3 1 1 96 3R 22830873 22830892 GCAGAATCCTAGTACAGGAC 57 22830743 22830817 GTGAATGGTGATTCTAGTTGGA 58 NA Drosophila melanogaster 61 CG31076 FBgn0051076 FBtr0085079 3 1 1 81 3R 22814878 22814958 CGAGTACTATAGCAACTACATTGC 59 22814820 22814838 TTTGTAGGTGCGTTGAACC 58 NA Drosophila melanogaster 61 TwdlH FBgn0051080 FBtr0085032 1 1 1 119 3R 22459523 22459604 TCCTTATTGCTCTGTGCCT 58 22459687 22459705 AAGGAGAGTAACTGGGTCC 58 NA Drosophila melanogaster 61 TwdlN FBgn0039441 FBtr0085031 1 1 1 93 3R 22458105 22458123 CTACACCGCTAACGAGGAG 59 22458180 22458198 CTTGATGAAGACGACACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14237 FBgn0039428 FBtr0085013 1 1 1 94 3R 22282019 22282556 AAATACGGAGTCGACCTCC 58 22282614 22282632 CTAGGATTCGGAGTGCCAG 59 NA Drosophila melanogaster 61 boss FBgn0000206 FBtr0084949 1 1 1 96 3R 21792194 21792273 CGGAACAGAGTGTTTACGA 57 21792333 21792351 GGTAACGTGGGAATCTCAC 58 NA Drosophila melanogaster 61 BG642167 FBgn0250831 FBtr0110770 3 1 1 72 3R 21632230 21632248 TTCCTTTCAGCATCAGGCA 59 21632415 21632435 CGAATCCGTATCATCCTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 3 5 5 104 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507760 21507838 AAAGATGGCGTAATGGTCAC 58 NA Drosophila melanogaster 61 tankyrase FBgn0027508 FBtr0084890 1 1 1 82 3R 21480669 21480687 TATGTGTACGGAATTGGCG 58 21480537 21480623 AGCAGCAATTGTCTAGGAC 57 NA Drosophila melanogaster 61 CG11910 FBgn0039332 FBtr0084846 3 1 1 60 3R 21207043 21207063 TGAGATCAAGACATTCACCGA 59 21207003 21207023 CAACATGCGATAGACCTTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31370 FBgn0051370 FBtr0290055 3 1 1 137 3R 21128790 21128871 ATCATTAACGAGCGACCAG 57 21128970 21128990 CGTCTTGTATCTGTCCAACTC 58 NA Drosophila melanogaster 61 CG31370 FBgn0051370 FBtr0290055 2 1 1 119 3R 21128700 21128719 TATGCTATGGTGCGAGATCG 59 21128799 21128882 CTTAACGAATTCTGGTCGCTC 59 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 2 2 2 136 3R 21108537 21108622 GAAATTCTACGCTGCCCAC 59 21108720 21108740 GATTCCTATAGCAGGCATCCT 59 NA Drosophila melanogaster 61 CG10513 FBgn0039311 FBtr0114505 3 1 1 96 3R 21101772 21101857 AGATTCTTTGCTGTCACAGTC 58 21101696 21101715 CGTCATCCTTCATCAAAGCA 58 NA Drosophila melanogaster 61 CG31115 FBgn0051115 FBtr0290053 1 1 1 81 3R 20863476 20863494 GAAGGTCCTGATAACGGCT 59 20863539 20863615 GCACACCAGAATCTTTGCC 59 NA Drosophila melanogaster 61 CG31120 FBgn0051120 FBtr0089440 1 1 2 80 3R 20740276 20740294 GTCTCTGTCCTGAATCCGA 58 20740153 20740234 GGGCTCAATGTAAGTCTTCAC 59 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 3 2 2 143 3R 20691552 20691737 GTTACCAAAGTGCAGGTGC 59 20691844 20691862 CAGGATAGGCACCAGTTCC 59 NA Drosophila melanogaster 61 CG13636 FBgn0039232 FBtr0084701,FBtr0084702 3 2 2 97 3R 20665204 20665345 CAGTGGAGCTAATCTTCAGG 57 20665405 20665423 AGAAATGCTTTCGCATGTG 57 NA Drosophila melanogaster 61 CG13615 FBgn0039199 FBtr0084617 2 1 1 80 3R 20217050 20217068 GGTGATCAATGAGGCACAG 58 20217110 20217196 GGCTGGTAATTAAACATGGTG 57 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 3 4 4 111 3R 20172701 20172813 CAGAACTACAACTCGACGG 58 20172608 20172626 CGGTAGCATTGTAGTCCAC 58 NA Drosophila melanogaster 61 CG5728 FBgn0039182 FBtr0084632 2 1 1 115 3R 20154806 20154880 CCAAATCAAGAGCACATCCC 59 20154710 20154729 CGTTTGGGATAGGAAGTGAC 58 NA Drosophila melanogaster 61 CG13607 FBgn0039151 FBtr0084585 2 1 1 60 3R 19940885 19940904 CAATTGCAGCAGATCTACGA 58 19940844 19940862 CGGCCATGAGTATGTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18428 FBgn0039149 FBtr0084543 2 1 1 80 3R 19935243 19935262 TTCACCAACACCAATACAGC 58 19935299 19935390 CTATTCATCAGTGCTATTGGTATGG 59 NA Drosophila melanogaster 61 CG34355 FBgn0085384 FBtr0273216,FBtr0273215 1 2 2 133 3R 19655747 19655912 GGCATTAAGGGTCAAATCTACG 59 19656006 19656024 ATGATGTAGCCATCGGGAC 59 NA Drosophila melanogaster 61 CG18754 FBgn0042106 FBtr0084439 3 1 1 80 3R 19510417 19510913 CTATCCTTGATTCGCTATGTGC 59 19510952 19510972 CTTCAGAACCAGGTCATTCTG 58 NA Drosophila melanogaster 61 beat-IV FBgn0039089 FBtr0084433 1 1 1 80 3R 19399758 19399776 GTTCTACCGATACGTGCCA 59 19399819 19400035 GAAAGCTCCTCAATGACTCG 58 NA Drosophila melanogaster 61 CG17083 FBgn0039070 FBtr0084383 2 1 1 60 3R 19112728 19112746 ATCTCTACAACTCGGTGCT 58 19112686 19112706 TCGTCCATATTGCTAGATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CSN6 FBgn0028837 FBtr0084265 1 1 1 89 3R 18406922 18406940 GAAGACGGACGTTATTGGC 59 18406993 18407069 AGATCACTGAACACCTGCT 58 NA Drosophila melanogaster 61 PyK FBgn0003178 FBtr0084213,FBtr0084214 3 2 2 86 3R 18197877 18197953 CTCATCTACAAGGAGCCCG 59 18198003 18198021 GTTCTTCTTTCCGACCTGC 58 NA Drosophila melanogaster 61 CG5382 FBgn0038950 FBtr0084237 3 1 1 124 3R 18191359 18191441 ATCCAAAGTGCATTGTGCAG 59 18191187 18191272 AACATGGTAGCAGACGAGG 59 NA Nonspecific Drosophila melanogaster 61 tsl FBgn0003867 FBtr0084164,FBtr0084165 3 2 2 81 3R 17604913 17605281 TCTATAGGAATCTGAGTGGCC 58 17604852 17604871 AACTCCATGTGAAAGTCTCC 57 NA Drosophila melanogaster 61 burs FBgn0038901 FBtr0084131 2 1 1 83 3R 17595389 17595474 CGCCACGGATAATGATATTACG 59 17595517 17595536 ACACATCCAGGATACTGGAG 58 NA Drosophila melanogaster 61 CG15497 FBgn0038894 FBtr0084113 2 1 1 95 3R 17491497 17491566 CTACTTCACAACAGGTGTGC 59 17491624 17491642 AGACCCTGTGATTCACCTC 58 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0113258 3 1 3 105 3R 16956695 16956789 TCTACAGAAAGTGCTGCCC 59 16956857 16956876 CTCTGGCAAGAGTCTTACCC 59 NA InUTR Drosophila melanogaster 61 CG17278 FBgn0046763 FBtr0084047 2 1 1 230 3R 16847303 16848407 CAGTATTGTTGGCCATCGC 59 16846991 16847009 TCTACGGACACTCCTTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 Rlip FBgn0026056 FBtr0084002 2 1 1 95 3R 16843587 16843673 GAGAGCGACTTTAGTGAGGA 59 16843731 16843749 GTATCCTCGATCCTTGCCC 59 NA Drosophila melanogaster 61 Nep4 FBgn0038818 FBtr0083936,FBtr0083937 1 2 2 80 3R 16479492 16479513 TGCCCAATATAGCAACTATACC 57 16479271 16479451 TCTGCGATATTCTCACCCT 57 NA Drosophila melanogaster 61 Elongin-B FBgn0023212 FBtr0083947 2 1 1 80 3R 16404507 16404647 CTTGACATTCAGGAACGAGG 58 16404446 16404464 ACTTCGGGTAAGTCTGGTG 59 NA Drosophila melanogaster 61 CG11391 FBgn0038732 FBtr0083789 1 1 1 80 3R 15605142 15605340 TTCGAAATGCACAGCTATCTG 59 15605380 15605400 GGTAATGAGTCCTGTTAGCCA 59 NA Drosophila melanogaster 61 CG16727 FBgn0038719 FBtr0083780 2 1 1 80 3R 15439954 15439972 CGCCTTCTCGAGATTTGTG 59 15440016 15440092 CTCAGGTACTCGAAGACCA 58 NA Drosophila melanogaster 61 CG15025 FBgn0038709 FBtr0083768 2 1 1 116 3R 15316150 15316303 AATCTAAGCCTTCTGTATCCG 57 15316054 15316072 GTACTCTGGGATTCAAGGC 57 NA Drosophila melanogaster 61 CG18493 FBgn0038701 FBtr0083756 1 1 1 80 3R 15216165 15216185 TGTCCAGGAGAAATGGATCAC 59 15216224 15216373 AGCAAATAACGCATCTGATAGG 59 NA Drosophila melanogaster 61 CG5835 FBgn0038682 FBtr0083751 2 1 1 174 3R 14979140 14979158 CTTCAACAGTGCGCTTCTG 59 14975346 14977221 GGAAGTATCCTCCACGACAG 59 NA DesignRelaxed Drosophila melanogaster 61 cdi FBgn0004876 FBtr0083716 1 1 1 80 3R 14875587 14875607 GCATTTGTAGAATTGTGTCCG 58 14875467 14875545 CTTGGCATCGTACAGACAG 58 NA Drosophila melanogaster 61 CG7714 FBgn0038645 FBtr0083686 3 1 1 128 3R 14551971 14552072 GAAAGCCGTGATCTTTGTG 57 14551861 14551880 AACTTGAATCCTGACTGTGG 57 NA Drosophila melanogaster 61 CG7708 FBgn0038641 FBtr0083669,FBtr0083668 3 2 2 94 3R 14509013 14509032 GCTTCTGTCCTATGTTGCAG 59 14509089 14509237 TCTCGTTCCAAGGTGTAGC 59 NA Drosophila melanogaster 61 CG14306 FBgn0038628 FBtr0113245 1 1 1 97 3R 14416863 14416881 GTTTGTGGCGTCCAATCTG 59 14416937 14417570 GATGATTGTCTTCTTCAGAGTTCG 59 NA Drosophila melanogaster 61 CG14312 FBgn0038596 FBtr0083599 2 1 1 176 3R 14109071 14109146 CAGTCGACAGGAACCTCTG 59 14108913 14108931 GTTTCCATCGATGATGCCC 59 NA Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083618 3 1 2 61 3R 14010863 14010996 GAAACACAAGTGTGATGCC 57 14010820 14010838 CAATTCACCAATGGTCGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG17802 FBgn0038549 FBtr0083526 3 1 1 107 3R 13629367 13629585 AACTTCCACTGTGAGGTCTG 59 13629279 13629299 CTTAGCACTCATTGCGATCAG 59 NA Drosophila melanogaster 61 CG8907 FBgn0038466 FBtr0083372 3 1 1 91 3R 12835488 12835507 GAATCTCACTGGGCAATACC 58 12835615 12835697 CTTGCTTAGCGTCTTTAGATCC 59 NA Drosophila melanogaster 61 Manf FBgn0027095 FBtr0083283 3 1 1 81 3R 12175453 12175473 GACTACAAACAGATCGAAACG 57 12175513 12175620 CGAGGTAGTAACAGAATCTGTG 58 NA Drosophila melanogaster 61 CG14876 FBgn0038368 FBtr0289992 3 1 1 86 3R 11659805 11659826 GAAATGGACAATGATGAACAGG 58 11659639 11659759 GTATATTGCGGGCTTTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31304 FBgn0051304 FBtr0083040 3 1 1 80 3R 10926018 10926037 TTCATAATGGAGGATCGGGA 58 10925900 10925976 CAACACATTACCTGTCAGCA 58 NA Drosophila melanogaster 61 CG3731 FBgn0038271 FBtr0083000,FBtr0083001 2 2 2 80 3R 10717530 10717550 TTCAACACATGCTACAAGGAC 58 10717592 10717684 GAAGAGCATATCCTCGCAC 58 NA Drosophila melanogaster 61 eff FBgn0011217 FBtr0083018 1 1 1 115 3R 10560129 10563151 GGAGATGATTTATTTCACTGGC 57 10559532 10559553 GGTGGTTTAAAGGGATAGTCTG 58 NA Drosophila melanogaster 61 Cad88C FBgn0038247 FBtr0082965 3 1 1 80 3R 10462237 10462255 TGAACAATTCACCGAGGTC 57 10462299 10462380 TGAACATGAGCAGAACTCC 57 NA Drosophila melanogaster 61 CG14839 FBgn0038219 FBtr0082920 2 1 1 60 3R 10088811 10088830 ACAAGACGGCACTATTAGAG 57 10088853 10088871 CTAAGTTGCCGCATTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31533 FBgn0051533 FBtr0082905 3 1 1 60 3R 9982800 9982818 ACATTGCGTCAAAGTCTGG 58 9982758 9982777 TTGATCCCTGGTAAACACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yellow-e3 FBgn0038150 FBtr0082759 2 1 1 82 3R 9230232 9230250 GTATCCCAACGAGGAGTGG 59 9230104 9230188 AGCACTCGTCGATATAAGTCC 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 3 5 5 82 3R 8845522 8845622 GAAATACACGAGAAGGTCCT 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 1 5 5 81 3R 8845523 8845623 AAATACACGAGAAGGTCCTC 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 yellow-f FBgn0041710 FBtr0082723 1 1 1 80 3R 8818238 8818258 TGTCTATAGAACCTCAGTGGA 57 8818112 8818197 TGGCGATTATTGGGAAACTC 58 NA Drosophila melanogaster 61 CG5245 FBgn0038047 FBtr0082589 2 1 1 60 3R 8255333 8255404 TCAACTATGGATCTGGCGA 58 8255428 8255446 CTTCTTGAGGTGGTTCGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082547 2 1 2 91 3R 7989272 7989356 TCCAGAAACTACGGAACCA 58 7989199 7989219 CAGCAGTAACGATTTCAACAG 58 NA Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 1 2 2 60 3R 7068725 7069511 GCTTGTGGGTATTACCGGA 59 7068683 7068701 GTTCCGGTACTTGTACGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG6672 FBgn0037875 FBtr0082371 2 1 1 93 3R 7039589 7039678 ACAGTTTGGGCCTGATCTC 59 7039514 7039533 TTCCACTTGGTGATAACCGA 59 NA Drosophila melanogaster 61 Ugt86Dg FBgn0040253 FBtr0082377 3 1 1 64 3R 6991572 6991592 GACATTTATGTTCCGGAAGTG 57 6991340 6991359 AGATCAAACTGAGCCTTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Tsp86D FBgn0037848 FBtr0082288 2 1 1 115 3R 6695201 6695219 AATCATCCACTCGTACCGT 58 6695298 6695373 CGTTCTTGCTCCAATCCTG 58 NA Drosophila melanogaster 61 CG4570 FBgn0037844 FBtr0082287 1 1 1 60 3R 6683350 6683368 GCAATGACCTCAATCTCCT 57 6683392 6683410 TGATTCTGAATCCTCGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 1 3 5 81 3R 5701880 5701898 GATGTCGTCAAACACGACG 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 Teh1 FBgn0037766 FBtr0082151 3 1 1 128 3R 5690792 5690810 GATAACGGTCATCTCGTCC 57 5654509 5690703 GAAGTATCACTGAGATTCTCGA 57 NA Drosophila melanogaster 61 CG16789 FBgn0037712 FBtr0082071 3 1 1 80 3R 5393213 5393231 CGAGGAAGTTAGCTTCCAG 57 5393272 5393347 CAGGTATCGTTAAACAGATCGA 58 NA Drosophila melanogaster 61 CG42511 FBgn0260237 FBtr0300646 3 1 1 60 3R 5232729 5232747 CATGTGCCTCAACTTCCTG 58 5232769 5232849 AATGCGGTTGGGAATAATGTG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG16736 FBgn0037668 FBtr0081985 1 1 1 119 3R 5083100 5083118 ATGGTCCTGGGTATAACCG 58 5082879 5083017 ATTTCGATAGTTGCGCCTC 58 NA Drosophila melanogaster 61 E(var)3-9 FBgn0260243 FBtr0082012 3 1 1 135 3R 4818504 4818525 CGGAATTTACTTTACCATGGGA 58 4818341 4818409 CCTCGCAACCTTTATGTTCC 59 NA Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 2 1 1 89 3R 4632215 4632233 AACTCAGAGATGAGGCCTG 58 4632284 4632357 TAACTATTTCCTGCTTCTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42285 FBgn0259181 FBtr0299665 2 1 1 128 3R 4194305 4194868 GTGAACCTAGATTGTCGCG 58 4194195 4194213 CTTGATGGCCACGAAAGTG 59 NA Drosophila melanogaster 61 Gie FBgn0037551 FBtr0081794 3 1 1 81 3R 3953909 3953993 TGCGATTGTCTACATGGTG 58 3954038 3954056 TTTGTCCAACAGTGAGTGC 58 NA Drosophila melanogaster 61 CG11035 FBgn0037544 FBtr0081816 1 1 1 60 3R 3858441 3858460 ACAGGAACCAAGGAAGTGAG 59 3858400 3858421 TCATAAGCCTGATTGATCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301217 1 1 2 104 3R 3826728 3826817 AACAATTTGGTCCGTGCTG 59 3826584 3826660 ATATCGCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 CG34127 FBgn0083963 FBtr0301072 1 1 1 81 3R 3400133 3401856 TCCAATTAATATCCGGGACGA 58 3400072 3400090 CAAATCCACCGTTTGAGCC 59 NA Drosophila melanogaster 61 CG34023 FBgn0054023 FBtr0100078 3 1 1 78 3R 3246062 3246086 GAGAGTTCTTATAAGGTATACCGTG 58 3246190 3246208 AGGGATCACCAATGCTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1288 FBgn0250845 FBtr0081604 2 1 1 148 3R 3033529 3033551 GCGGAGATTACATAGATGAAACG 59 3033348 3033366 ACCCGATAGTTGGAAGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42651 FBgn0261503 FBtr0302395 1 1 1 153 3R 2638291 2638309 GAACAGTGACACTTGGCAC 59 2636116 2636134 GTGAATCGGTAACGACGTG 59 NA DesignNoJunction Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081664 3 1 5 244 3R 2582671 2584837 TTCGATTTGATCTTGGAGCCT 59 2582447 2582468 GGATTATACGCTTGCATTATCG 57 NA DesignRelaxed Drosophila melanogaster 61 Ccp84Ab FBgn0004782 FBtr0081692 2 1 1 193 3R 2528442 2528537 CCTTCAAGTTTGTCTTCGCC 59 2528268 2528286 GTAGGAGAAGCGGTACTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682,FBtr0081683 1 2 2 80 3R 2467275 2467352 AAGTTATGCTTGGAAACTGTCC 59 2467390 2467411 CAGATGCTTTCTGTGTAATCCT 58 NA Drosophila melanogaster 61 Osi14 FBgn0040279 FBtr0078606 3 1 1 180 3R 2125039 2125057 GTTCAAGACAACCAGGTCG 58 2125201 2125685 GATCCCTCTGGAAGGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Osi6 FBgn0027527 FBtr0078596 2 1 1 130 3R 2060579 2060597 CAGGTATCTCTGCCGATCC 59 2061318 2061337 GTTATCGAACACGGACTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10979 FBgn0037379 FBtr0078631 1 1 1 80 3R 1621009 1621112 GGATACACAGATCAGAATTCCA 57 1621151 1621171 GCGTAGCATATGTTCAATGTC 57 NA Drosophila melanogaster 61 sec8 FBgn0086685 FBtr0078677 3 1 1 127 3R 1582955 1582977 TCACCGACTACTTGGATATACAG 59 1582788 1582868 CATTGATCGCTTGGTGCTC 59 NA Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 1 2 2 83 3R 1233858 1233876 ATACCTAGGATACGCGCTG 58 1233432 1233812 TCCATGACGGATGAACTCTC 59 NA Drosophila melanogaster 61 Dip2 FBgn0040466 FBtr0078893 3 1 1 85 3R 470786 470910 TACTACAATTGACGCAGTCCA 59 470721 470740 TCACAGCTTCCTTTAGAGCA 59 NA Drosophila melanogaster 61 Syt14 FBgn0261086 FBtr0078957 2 1 1 70 3R 142823 143388 CAACAACGATGACGAACCC 59 142771 142789 CAACCAGTAGGTCATCCGA 58 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi18S-1397 FBgn0083044 FBtr0113606 2 1 1 66 3L 5756022 5756040 TGCCAGAACAAATTCCAGG 58 5755974 5755992 CATGTTCAGACAGAGGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CkIIalpha FBgn0000258 FBtr0070042,FBtr0070043 3 2 3 247 3L 23093412 23093430 AATACTTTGGCAAGCCAGC 59 23095403 23095423 ATAGTCCCAATATTCATCCGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13239 FBgn0037197 FBtr0078548 1 1 1 60 3L 22854152 22854170 CAAAGACAGTTTCTGTGCC 57 22854194 22854212 GGAGTTACCGGTAATGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 2 1 1 149 3L 22253461 22253729 GAACAGGTCCCAAACACCT 59 22253330 22253349 CAGTATTGGAAGCCATACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33290 FBgn0053290 FBtr0078370 3 1 1 60 3L 21535862 21535880 GATAACAGCCGACTTCCCA 59 21535901 21535922 GCTTCAATCTATTCACCCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 croc FBgn0014143 FBtr0078395 2 1 1 60 3L 21468959 21468977 CTATCGCGACAACAAGCAG 59 21468917 21468937 CTCGTTGAGGCTAAGATTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10584 FBgn0037045 FBtr0078327 2 1 1 60 3L 21024300 21024320 AGAGAACAACTACCAGACGAC 59 21024260 21024278 GACGAAACGGAACTTCGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 1 4 4 80 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508475 20508553 AACCATAGCCCGAATCCAG 59 NA Drosophila melanogaster 61 CG6480 FBgn0036964 FBtr0074847 2 1 1 85 3L 20289495 20289513 GAAGGATGGAATGGTCACG 58 20289369 20289446 GAGCCATTCGTTGTTCCTC 58 NA Drosophila melanogaster 61 CG9372 FBgn0036891 FBtr0074945 3 1 1 89 3L 19600846 19600864 ATTGGTCGGATAGAAACGC 58 19600917 19601112 GCAGGTTAACCTCCATGAG 57 NA Drosophila melanogaster 61 CG9451 FBgn0036876 FBtr0074979 1 1 1 80 3L 19492776 19492794 GTGAGCACTTATCCCAACG 58 19492650 19492733 TTTAGCACCATTGGTGAGTG 58 NA Drosophila melanogaster 61 Max FBgn0017578 FBtr0075018 2 1 1 86 3L 19256241 19256259 ATGAGGCGGAAGATCAGTG 59 19256108 19256193 CAGTGCTTGTATCTGCTTAGC 59 NA Drosophila melanogaster 61 CG6841 FBgn0036828 FBtr0075068 2 1 1 80 3L 18900209 18900229 AAGGCTGTCATTGGAATAGGA 59 18900270 18900370 TTCCTTTGCGCAGAATTCAG 59 NA Drosophila melanogaster 61 CG6856 FBgn0036819 FBtr0075062 1 1 1 94 3L 18861699 18861717 CTTCCGGGAGGATATGGAG 58 18861833 18861851 CAAGGACGACTTCCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 GNBP1 FBgn0040323 FBtr0075050 3 1 1 80 3L 18670118 18670137 ACCTTTGCCTTTCAATACGG 58 18670176 18670262 GAGTAGTAGGAGTGGTACTATCC 58 NA Drosophila melanogaster 61 CG7320 FBgn0036782 FBtr0075128 1 1 1 118 3L 18194854 18194934 ACAGTATGTGGTCTACAACGA 58 18195013 18195032 GCATCTGCCGATAATGATCG 59 NA Drosophila melanogaster 61 CG34002 FBgn0054002 FBtr0302155 1 1 1 80 3L 17852832 17852851 TGAACGCATGGTATGATCAG 58 17852892 17852984 CAATCTCCTTCTTAGCTGTGG 58 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113427,FBtr0075285 2 2 4 98 3L 17160139 17160158 ATAAGGTACTCACCCAAGGC 59 17122059 17158018 TTCTCGTCACCATCTTGGG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 3 3 4 145 3L 17071248 17071267 TGTGGTAGACAAAGTTTGCG 59 17067480 17070734 TGATGTTATCGTATGCAGAACG 59 NA Drosophila melanogaster 61 Rh4 FBgn0003250 FBtr0075338 2 1 1 71 3L 16854987 16855005 AGTTCTGGGATCGATTCGT 58 16846292 16846313 CAAAGTTGTCCGAAAGATAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364,FBtr0100244 1 2 2 127 3L 16583552 16583570 GTCAACATAGCCGAAGTCG 58 16583386 16583462 AGACATCCCGTAGAAATCCT 58 NA Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 3 2 2 99 3L 16567986 16568004 AAGAAAGCACCGAAATCGT 58 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 Mipp1 FBgn0026061 FBtr0075398,FBtr0075399 2 2 2 80 3L 16557864 16557888 CTGAGTACTACAAGTTTCATCAGTC 59 16557738 16557828 TGTAAAGGAAACCCAATCGAG 58 NA Drosophila melanogaster 61 CG5018 FBgn0036578 FBtr0075484 3 1 1 67 3L 16221614 16221634 AGCTTGGCGTATAGTAAATCG 58 16221497 16221515 CATAGCTCAATGACGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42571 FBgn0260777 FBtr0301332 3 1 1 83 3L 15709673 15709693 CAAACTTACGGATCCCTTGTG 59 15709738 15709811 ACTACGACCACTTTCCACC 59 NA Drosophila melanogaster 61 comm2 FBgn0041160 FBtr0075580 1 1 1 185 3L 15692457 15692475 ATCGGGTGATTCTGGACAG 59 15691549 15692309 CATTGTTGCGATAATTGCGT 58 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 2 2 2 86 3L 15673900 15673979 AAATCAAGGAACCTGAAACGC 59 15674027 15674045 ATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 CG7011 FBgn0036489 FBtr0075645 2 1 1 146 3L 15154372 15154395 CCCATATACACGAATCAATTCTCC 59 15154184 15154267 GAAGTGGCCAAATGAGCTG 59 NA Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075635 3 1 3 123 3L 15101947 15101967 TTTATTCACGACATCGAGGAG 58 15102052 15102449 TGAGAACGATCTTTGGCAG 57 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0100443,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 2 9 9 67 3L 14746560 14746738 AACAGAGAAACCACGTTCAC 58 14746512 14746530 TGACAGCATAGCAAATGGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Fbp1 FBgn0000639 FBtr0075749,FBtr0075750 1 2 2 60 3L 14089534 14089553 AACTATGCCGATCAGTTGGA 59 14089493 14089513 GGTTAATATGCACCAATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14120 FBgn0036321 FBtr0075868 2 1 1 60 3L 12878817 12878840 CATCACAATCAGTAACATACTCGG 59 12878855 12878877 GTCATCGCTAAAGTTGAAGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 3 4 4 87 3L 12558125 12564646 CAGAGAAGCAATTAATCGAGGAG 59 12558060 12558078 TTCGCCATCGAGACTATCC 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983,FBtr0075982,FBtr0075984 2 3 3 117 3L 12398027 12398112 TGTACTTGCAGGTACAAACAC 58 12397930 12397951 GCAATCTTCAACACATTGATGC 59 NA Drosophila melanogaster 61 CG6928 FBgn0036240 FBtr0076049,FBtr0076050 3 2 2 80 3L 11999277 11999598 GAACTTTGAACAGATGCTCTC 57 11999640 11999658 ATGGCTACATTTCCAAGCA 57 NA Drosophila melanogaster 61 CG11570 FBgn0036230 FBtr0076065 2 1 1 60 3L 11950332 11950352 ATTCTACGAGACACGTATCCT 58 11950292 11950312 CTGGTATACTGAACTCCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14127 FBgn0036219 FBtr0076037 3 1 1 85 3L 11875045 11875144 CAACAGGAAGCTCGTATGC 59 11875192 11875211 ACTTCTTTCGAATGTGCTCC 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 3 2 6 115 3L 11810737 11811190 AAGCCTGGTCCTACAACAC 59 11810640 11810659 ATAGTTCACCATGGGTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 1 2 2 80 3L 11714553 11715112 CCTCTATTCCGGTATTTGGC 58 11715154 11715173 TTCAGGGTGTAGTAGGTTCC 58 NA Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 1 2 2 139 3L 11688021 11688039 GCCACTTAGTCCTGGAGAG 59 11687836 11687920 ACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 Vha16-2 FBgn0028668 FBtr0076091 1 1 1 60 3L 11468316 11468334 GGTATCCGTCCTGATAGCC 59 11468356 11468376 CACATAACTGTCTTCCATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076175 3 1 2 158 3L 11438604 11438679 TGGCGACGATGGATTATCC 59 11438862 11438882 AGATCCGTTCCAAGTTCAGAG 59 NA Drosophila melanogaster 61 CG32074 FBgn0052074 FBtr0076222 1 1 1 60 3L 11125307 11125325 GGTCACTATTCCATCGGTC 57 11125265 11125283 CGTGTCTGTATCAGTGGTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 1 3 3 80 3L 10889924 10889946 TCTACGACAAGGATGGATTTAGG 59 10889712 10889884 TTACCAAGAGTACCTCCGC 58 NA Drosophila melanogaster 61 CG6527 FBgn0036085 FBtr0076291 2 1 1 82 3L 10551831 10551913 CCTACAAGGTGCAATGTACAG 59 10551769 10551787 ATGTGAGTGCTCATTGGGA 59 NA Drosophila melanogaster 61 ect FBgn0000451 FBtr0076305,FBtr0076307 3 2 3 146 3L 10188088 10188553 CAACAACGAAGGTATCGCC 59 10184871 10184890 TCCGTGGACATATCGATGAC 59 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076351 2 1 5 298 3L 9966116 9966137 GCAGACGATCACGTTATAATGG 59 9966396 9966414 GGTCATTAGGTCTTCCGGT 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Or67a FBgn0036009 FBtr0076375 3 1 1 80 3L 9523816 9523905 CACATTGATATACTTCGACTCACTG 59 9523940 9523961 CGCAGATGCAATAAAGTTTAGC 59 NA Drosophila melanogaster 61 Uch-L3 FBgn0011327 FBtr0076472 3 1 1 108 3L 9469788 9469885 TATTCGCGAATTCGGATGC 58 9469698 9469718 CTTGAACAGGAAGATCAGACC 58 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 2 2 2 80 3L 9451446 9451520 TTCTATGCGGAGCTTAATTCAG 58 9451560 9451579 CTTAAAGGTGGGATTGAGGC 58 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0113323,FBtr0113322,FBtr0113324,FBtr0076460,FBtr0076459 1 5 5 186 3L 9429058 9429076 TACGAATGTGAGGTGTCCG 59 9429334 9429352 CTTCCGGACATTTGTAGGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Hsp27 FBgn0001226 FBtr0076454 1 1 1 60 3L 9377682 9377700 TTTGTGCGCAAGTATACCC 58 9377724 9377742 AGACAGTGGACACTACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arp66B FBgn0011744 FBtr0076737 2 1 1 85 3L 8108565 8108583 CATCACAAAGGGCATCGAG 59 8108435 8108516 GCACCGGATACTTGATGGA 59 NA Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 3 2 2 120 3L 8048535 8048989 TTGAACTTGTTGAGAGCCC 58 8048433 8048451 TTTATGGACAGCACATCGC 58 NA Drosophila melanogaster 61 CG10075 FBgn0035722 FBtr0076939 2 1 1 140 3L 6950559 6950577 GTTTGGCTACTCCTGATGC 58 6950370 6950455 TGAAGGATTGTGAGCTCCC 59 NA Drosophila melanogaster 61 CG9948 FBgn0035721 FBtr0076896 3 1 1 98 3L 6949409 6949431 CTATAAGAGATCTGGACTCTCGA 58 6949489 6949563 CAGAAGTCCACATCACAGC 58 NA Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0077055,FBtr0273355 2 3 3 91 3L 6105513 6107403 AATCGCAAGGTTACAGCTC 58 6109057 6109077 GGGTCCGAACATTTGATATGG 59 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 1 3 3 82 3L 6088435 6088525 GACTATAAGGTTCACATAGATGCTG 59 6088565 6088583 AAGGACACGTAGAAGGTGG 59 NA Drosophila melanogaster 61 CG6619 FBgn0035676 FBtr0077049 2 1 1 83 3L 6072373 6072451 GTGAGGAAGGTGGATCTCC 59 6072498 6072516 GTGTACCCTCTCCAGTTCG 59 NA Drosophila melanogaster 61 CG10479 FBgn0035656 FBtr0077070 1 1 1 116 3L 5962003 5962021 CACAAGGTCTACGACAGCA 59 5961685 5961926 GAGAAGGTCCTCATCATAGTCG 59 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076,FBtr0077075,FBtr0077074 1 3 3 202 3L 5924805 5924823 GCCGATCATTTGGTCATCC 59 5924562 5924580 AATGTGCAGTAGTTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10673 FBgn0035590 FBtr0077180 3 1 1 60 3L 5132040 5132061 GATCTCACCACATCTAACATCC 58 5132001 5132020 TCAGAATGACATCGTAGTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13707 FBgn0035578 FBtr0073357 2 1 1 99 3L 4838436 4838740 GAGCTTAGTGCTCGAATCC 58 4838355 4838373 CTCGATCATCCTGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7514 FBgn0035567 FBtr0073367 3 1 1 60 3L 4687939 4687959 TGAAGGTCTCAAAGAATGAGG 57 4687899 4687917 CACAAATAGGGCGTGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syx17 FBgn0035540 FBtr0073293 3 1 1 89 3L 4404124 4404142 GGATCTGGAACGTTTCGAC 58 4404195 4404274 GATTTGAGTTGGAGCTCCG 58 NA Drosophila melanogaster 61 mRpS6 FBgn0035534 FBtr0073288 3 1 1 222 3L 4364710 4364728 TACGAACTAGCACTGGTGC 59 4364980 4364998 AGTCTGCGATCTTAGTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 Gr63a FBgn0035468 FBtr0114512 3 1 1 84 3L 3896330 3896408 CCGGAATTTAAGCCGAGTG 59 3896264 3896283 GCACGATGGGTAATACTCCA 59 NA Drosophila melanogaster 61 CG10862 FBgn0035455 FBtr0073139 3 1 1 100 3L 3654504 3654522 GACCAGTCCGATAGACCAC 59 3654315 3654440 CTTTCGTCCATTGTCGGTG 59 NA Drosophila melanogaster 61 CG10357 FBgn0035453 FBtr0300062 1 1 1 80 3L 3615610 3615706 CCTCTGAGAAATGCCTATACTG 58 3615745 3615765 ATAATCTAGATTGGCCACAGG 57 NA Drosophila melanogaster 61 CG14971 FBgn0035449 FBtr0073143 3 1 1 147 3L 3469318 3469398 GTAATTGGAATCGAAGGTGCC 59 3469191 3469209 AGAGCACCAAGAATTCGCT 59 NA Drosophila melanogaster 61 sty FBgn0014388 FBtr0073145 1 1 2 106 3L 3404912 3424433 CCTTCACCGAAAGCAATCG 59 3404824 3404842 ATCCGAGATCCTCAATGCC 59 NA InUTR Drosophila melanogaster 61 sty FBgn0014388 FBtr0073146 2 1 2 199 3L 3404904 3416804 TAAAGCAATCGCAGCTGTC 58 3404723 3404743 CATGTAGTGTTGTAACCAGGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ckd FBgn0035427 FBtr0073050 3 1 1 109 3L 3267275 3267433 GTACAATTGCCAGATCTTTCAC 58 3267502 3267521 AGTCCCAATCACAGATTCTG 57 NA Drosophila melanogaster 61 spz5 FBgn0035379 FBtr0073011 1 1 1 91 3L 2886752 2886770 CACCCTTCGGAGGTAATCC 59 2886399 2886697 CAGAAGATACGTGGGTGCT 59 NA Drosophila melanogaster 61 CG42303 FBgn0259199 FBtr0299683 2 1 1 66 3L 2653600 2653618 CACAATCACCTTGTCCCTG 58 2653646 2653726 TACATATTTCTGCGAGGACTC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 3 1 1 75 3L 2595972 2596046 AATCCTGTTGTGGAGAGGG 59 2596084 2596103 ATAGCTTCTTGTCCTCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5704 FBgn0026570 FBtr0072915 1 1 1 170 3L 2170683 2170831 CTGAGCGATTTCGAAGCTG 59 2170531 2170553 GCAGAGTACTCCTAGATAGTCAG 59 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 2 2 2 80 3L 2094850 2094934 CTTGCAAGAAACTCCCTACC 58 2094789 2094809 CCATTTGGGTTAGAGCATCTG 59 NA Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072832 2 1 2 121 3L 1857293 1857311 AAGATGTTCCCGGACATCG 59 1857395 1857475 AGTTTCTCGTTCTGGTTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG12024 FBgn0035283 FBtr0072833 2 1 2 132 3L 1857281 1857302 ACCGACTTTAAGAAGATGTTCC 58 1857395 1857522 TGATGAGGCTCTGGTTGTC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 1 1 3 159 3L 1803312 1803435 GACCTAAAGAACGTGGTGC 58 1803555 1805018 CATCGTAGACTTGACTGATCTC 58 NA Drosophila melanogaster 61 alpha-Spec FBgn0250789 FBtr0072789 3 1 1 84 3L 1779441 1779459 GAGGAGATCGAGAATGCCT 58 1779301 1779393 TGGTGAGGTTGCAGTAGAG 59 NA Drosophila melanogaster 61 CG12018 FBgn0027903 FBtr0072775 3 1 1 60 3L 1776005 1776025 GAGGACAAGATTGTTCTGGAG 58 1776045 1776065 CATTTAGCTTGCCCTGAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13928 FBgn0035246 FBtr0072822 2 1 1 60 3L 1627697 1627716 AAAGGTCAATAAGGTGTGCA 57 1627656 1627674 GTACTGCTGGTACATACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13926 FBgn0035243 FBtr0072823 3 1 1 144 3L 1617770 1617788 CAGCCAGGAGATCTCACAC 59 1617559 1617579 GGCGTAGTTGAAGAAGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Cct2 FBgn0035231 FBtr0072742 2 1 1 93 3L 1554318 1554336 CTGACCCTCAGGATGAAGG 59 1554393 1554470 TCGGAACGATCTCATCCAC 59 NA Drosophila melanogaster 61 CG2199 FBgn0035213 FBtr0072722,FBtr0072721 3 2 2 146 3L 1341858 1341942 ATCACCCACAGAAGCATCC 59 1341730 1341749 TACCTTAGTCTTCTTGGCGG 59 NA Drosophila melanogaster 61 msd1 FBgn0035209 FBtr0072678 2 1 1 93 3L 1331779 1331797 GAAATGTCAGACGCTGTGG 59 1331905 1331927 CCATTATCTCGTCTATCTTAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 LysC FBgn0004426 FBtr0072629 2 1 1 75 3L 1210596 1210614 GACCAGCTGAACAAGTGAG 59 1210653 1210671 AGTTCTCAGGACCAACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Trh FBgn0035187 FBtr0072638 1 1 1 90 3L 1191110 1191187 CAAGGAGCAAATGAGAGCT 57 1191038 1191056 CGACAGGACTTCAACACTC 58 NA Drosophila melanogaster 61 Gr61a FBgn0035167 FBtr0072585 2 1 1 93 3L 842101 842168 TGCCAAGAATATCGTGGGT 59 842225 842243 CATTATGTGCGACCAGGAG 58 NA Drosophila melanogaster 61 CG13894 FBgn0035157 FBtr0072606 1 1 1 171 3L 694982 698871 AACACTGGATATTCCAGTGGA 58 694831 694849 CAAGCATCCGATGATGCAG 59 NA InUTR Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 1 2 2 80 3L 364833 364851 CGCACAAGGAGAGTAAACG 59 364895 364974 GAAGGTGTATCCGAAAGGC 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 3 5 5 86 3L 245466 245936 GAAGGAAAGGGTACGAGTC 57 245398 245419 GCATATCATCCTCATTATCGGA 57 NA Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 3 2 2 89 3L 197527 197597 AGCTAGAGGTTCGTTGCTG 59 197456 197475 CGCAGATGACATTCTCATCG 59 NA Drosophila melanogaster 61 CG6845 FBgn0035099 FBtr0273352,FBtr0273353,FBtr0273351 3 3 3 80 3L 146641 146660 TCTTAATCTCACCTTCGCGA 59 146701 146786 AAAGTCACAATGCACCTTACG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-G2703c FBgn0082929 FBtr0113510 1 1 1 60 2R 10511517 10511538 AATGATGACAATACAGTCCGTG 58 10511557 10511577 TGACTTATCAAACAGCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33362 FBgn0053362 FBtr0086354 1 1 1 60 2R 15650401 15650419 ATACATCGGTTCTCGTCCG 59 15650359 15650377 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr FBgn0001325 FBtr0072449 1 1 1 109 2R 21114502 21114893 CAAACGCGAACCTTAGCTG 59 21114965 21114984 CTTGTAGCTGATGTGTTGGC 59 NA Drosophila melanogaster 61 CG3829 FBgn0035091 FBtr0072396 3 1 1 80 2R 20876074 20876094 CTCTTTGTAATCAGCGTGACC 59 20876134 20876211 GATCAGGTTCTCCAGAATGGT 59 NA Drosophila melanogaster 61 CG2765 FBgn0035087 FBtr0113118 2 1 3 120 2R 20849265 20849878 GGAGGGAGCTCAGAAACTG 59 20849163 20849184 GTGTCGTCCATAATGTTGACAG 59 NA InUTR Drosophila melanogaster 61 Reg-5 FBgn0015801 FBtr0072427 1 1 1 80 2R 20680363 20680382 GCCTTCCACATTCAGATCAG 58 20676680 20680320 GAGGTGGGACATCTTCTCG 59 NA Drosophila melanogaster 61 CG16936 FBgn0027590 FBtr0072436 2 1 1 84 2R 20655054 20655073 ATTATGCCACCCTAAGTCCC 59 20654932 20655009 TTAATTGGCCGTAGTTCAAGG 58 NA Drosophila melanogaster 61 CG3548 FBgn0035033 FBtr0072315 3 1 1 152 2R 20487771 20487789 CTCCCTTAACTGGGAGGAG 58 20487905 20487998 TTAAGGGCATTGAACTGCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG13590 FBgn0035012 FBtr0072353 3 1 1 112 2R 20381349 20381427 CTATCTAAGCTGCGGAGAGG 59 20381256 20381275 CTCGAGAATAGGCCTTCAGG 59 NA Drosophila melanogaster 61 CG3328 FBgn0034985 FBtr0072257 3 1 1 126 2R 20060245 20060263 CAACCACACCATTGACGTG 59 20060352 20060568 CTTGTTGGAGCTCAGATGGA 59 NA Drosophila melanogaster 61 CG10339 FBgn0034972 FBtr0072288 2 1 1 158 2R 19967251 19967600 TTTGTACCTGATGGACTGC 57 19967111 19967129 GATGTTCAGCCGATACGAG 58 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 1 2 2 86 2R 19924653 19924731 GTCAACCGACTAACCACCT 59 19924585 19924603 GACTGTTTCGCAAGTCGAG 59 NA Drosophila melanogaster 61 CG3163 FBgn0034961 FBtr0072165 3 1 1 60 2R 19917890 19917908 AAAGATCATCGCCGATGTG 58 19917932 19917950 TATACTCAGCGAGGACAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Upf3 FBgn0034923 FBtr0072221 3 1 1 104 2R 19782130 19782207 GATCGTTAAGATTGTGATGCG 57 19782046 19782066 TTGCAGTAGTAATACGAGTCG 57 NA Drosophila melanogaster 61 CG5597 FBgn0034920 FBtr0072131 2 1 1 82 2R 19775852 19775871 AAGACGATCCACAATGAGAC 57 19775913 19776012 TCGTTGGATATTATCGTGATGG 58 NA Drosophila melanogaster 61 CG4585 FBgn0025335 FBtr0072227 1 1 1 108 2R 19752635 19752653 TCAATGATTCAGCAAGGCG 58 19751842 19751860 CTTGCTGATCTGCGAACTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13561 FBgn0034906 FBtr0072243 1 1 1 80 2R 19692100 19692123 CATCCCTTCATTAACATCATCCTG 59 19691982 19692062 CACTATTTCCGGTGGAATCG 58 NA Drosophila melanogaster 61 ord FBgn0003009 FBtr0072047 1 1 1 124 2R 19160342 19160360 CTGGAGGTCTTCAACCAGG 59 19160176 19160254 AAGTCTTCGAGGGTCTTGG 59 NA Drosophila melanogaster 61 CG3092 FBgn0034835 FBtr0071999 3 1 1 60 2R 19120864 19120885 CCGGAAATACGCCTTTATAGAC 59 19120903 19120924 ATCAAAGTCCTTGGTATTTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3215 FBgn0034825 FBtr0071974 2 1 1 87 2R 19016938 19016956 ACATATTCAAGTCGCCCAC 57 19016810 19016889 GCAATGATGTTCCTTAGAGTG 57 NA Drosophila melanogaster 61 Nup214 FBgn0010660 FBtr0071996 2 1 1 80 2R 18809967 18809986 GTCTTAATGAGGCCTATGCC 58 18809849 18809925 TTAAACGCGTAATCTCTGGT 57 NA Drosophila melanogaster 61 CG30259 FBgn0050259 FBtr0071921 1 1 2 80 2R 18591485 18591505 AATCCACCGAGGATATGTACG 59 18591133 18591449 GATCTCTATGGGTATCAACTATCCT 59 NA Drosophila melanogaster 61 CG4250 FBgn0034761 FBtr0071865 2 1 1 133 2R 18551368 18551500 TGATATTGCAGGCTCCACC 59 18551597 18551615 GATGAGTAGGGCCAACAGG 59 NA Drosophila melanogaster 61 CG10344 FBgn0034729 FBtr0071840,FBtr0071841 2 2 2 61 2R 18314193 18314213 GCATGATGATTGACACAAGTG 58 18314097 18314116 ATTCAACTGATCCGATGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Gr58b FBgn0041238 FBtr0071732 3 1 1 107 2R 17866102 17866177 AGATGCAAAGGGAGTTGGA 59 17866013 17866032 TATAACTAAGGCAAGCGGGT 58 NA Drosophila melanogaster 61 CG9304 FBgn0034674 FBtr0071726 3 1 1 82 2R 17862182 17862203 CGGGATGGATAATTCTGATGTC 58 17862246 17862317 GACTTCCGTCCTATCCCAG 59 NA Drosophila melanogaster 61 CG30392 FBgn0050392 FBtr0071618 1 1 1 104 2R 17179223 17179241 AACCATGCTGGATTACGAG 57 17179077 17179155 TAGACAAAGTCAAGACCGC 57 NA Drosophila melanogaster 61 CG9437 FBgn0034599 FBtr0071575 1 1 1 60 2R 17056858 17056879 GATGAAGGTTGATTTACAGCGA 59 17056898 17056918 CAAGGTCTCTGTGTCAATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 1 2 2 91 2R 16861135 16861426 TCTTTATGGCCGCTTTACC 57 16861062 16861080 TGTCTCCGTAATCAGTCGA 57 NA Drosophila melanogaster 61 CG9235 FBgn0034560 FBtr0071517 2 1 1 60 2R 16797526 16797544 GACCTCATACCTGGGACAC 59 16797565 16797586 CAGTTCATATCGATGTTGATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 2 1 1 83 2R 16768650 16769708 TTTATGATTTCGATCAGGACGG 58 16769752 16769770 GACTCAGCTCGTTCTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9236 FBgn0034558 FBtr0071516 1 1 1 82 2R 16768651 16769708 TTATGATTTCGATCAGGACGG 58 16769752 16769770 GACTCAGCTCGTTCTTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG13442 FBgn0034546 FBtr0086240 1 1 1 83 2R 16616808 16617430 ATAATCCCGAACAACTCGTG 58 16616744 16616762 TAATCCAACACTCCAGGCA 58 NA Drosophila melanogaster 61 Gr57a FBgn0041240 FBtr0086241 2 1 1 102 2R 16573350 16573368 GAATCCCTAATGTCGTGGC 58 16573211 16573287 CCAGAATCGATGTAAACAAACC 58 NA Drosophila melanogaster 61 Nnf1a FBgn0034523 FBtr0086257 3 1 1 83 2R 16474221 16474316 AAGAAATGGAACGTGAACACTG 59 16474159 16474177 GAATTCCACGCTGAAGTCC 58 NA Drosophila melanogaster 61 CG30148 FBgn0050148 FBtr0086266 1 1 1 60 2R 16434929 16434947 GCTAAACGAGGAGTTCGAC 58 16434887 16434905 GGCTTTCGGAATATCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13423 FBgn0034513 FBtr0086217 1 1 1 80 2R 16424671 16424690 CCCAAGAAATGCTACCTCCA 59 16424730 16424812 GGCATATTCACGTAGCTTACTC 59 NA Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 2 2 2 80 2R 16153222 16153294 TTGCCCAAATGATTGTGATGG 59 16153334 16153354 AGTATATCCATGCCCTCACAC 59 NA Drosophila melanogaster 61 Toll-7 FBgn0034476 FBtr0086336 3 1 1 60 2R 15717621 15717639 GCGAATCCCTAAGGATCTG 57 15717663 15717681 CAACGTGGACCGAATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp56c FBgn0046879 FBtr0086479 1 1 2 83 2R 15588503 15588522 TTCGTTTCTAAAGCATGGGT 57 15588281 15588299 CATCGACATGTTCAGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34045 FBgn0054045 FBtr0302390 3 1 1 92 2R 15220258 15220276 ACTCCTGTCTGAAGAACGC 59 15220330 15222249 TCGAGTTACGCCTAATTTCCA 59 NA Drosophila melanogaster 61 CG33454 FBgn0053454 FBtr0086565 1 1 1 86 2R 15138673 15138752 TTCTTGCCCGTATGGTACG 59 15138605 15138628 CGTGATAAATAATCTCCAGAGGGA 60 NA Drosophila melanogaster 61 Jheh3 FBgn0034406 FBtr0086622 1 1 1 90 2R 14749081 14749099 CCTGACCAAGTGGGATGAG 59 14748949 14749033 GTGGATATAGTGAATATTCAAGCCC 59 NA Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086795 3 1 5 157 2R 13731906 13738566 CCAGCAGAAATACAGACGT 57 13738686 13738705 TGATCACTGCAGAACTTCTC 57 NA InUTR Drosophila melanogaster 61 robl FBgn0024196 FBtr0086920 2 1 1 80 2R 13344208 13344297 GTCAACAATGAAGGTATTCCGG 59 13344338 13344356 CAGCTGACTCATTAGGCCA 59 NA Drosophila melanogaster 61 CG30101 FBgn0050101 FBtr0086963 3 1 1 83 2R 13297489 13297615 TGCGAATGTTCGTACTTCCT 59 13297425 13297443 CCTCGGCCTTCTTATCCTC 59 NA Drosophila melanogaster 61 CG6796 FBgn0034177 FBtr0087057 2 1 1 96 2R 12889614 12889693 TTTGGCCATACAGGGATGG 59 12889753 12889771 CACCTGGAACCTACTGCTC 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 106 2R 12677130 12677224 GATCAGTACAAGCGCTCTC 58 12677294 12677312 GCCGGAGTAACTACTTCCA 58 NA Drosophila melanogaster 61 loopin-1 FBgn0259795 FBtr0087092,FBtr0113086 1 2 2 60 2R 12423832 12423850 CGATCCGCTACTCTATGCC 59 12423873 12423892 AGTTCCGATATCGATGACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33458 FBgn0053458 FBtr0087085 1 1 1 80 2R 12374735 12374754 CAGAACAGCCCACTATTACG 58 12374794 12374865 CAAATCGGACGTATGCTATCTG 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009,FBtr0100001 1 2 2 80 2R 12313406 12313426 CGATCATGAATTTGGCAATCC 58 12313468 12314011 TCGATCCGTATCTTGTCCA 57 NA Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087145 1 1 5 109 2R 12224346 12224367 CCCTGGACCATTAATATTAGCA 57 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 csul FBgn0015925 FBtr0089872,FBtr0089871 2 2 2 84 2R 12153287 12153306 AAACTCTATCAGGATGCCGT 58 12153351 12153431 GCATTACAACTGTCAGTTTCG 58 NA Drosophila melanogaster 61 CG8320 FBgn0034059 FBtr0087202 2 1 1 106 2R 11880342 11880362 GACTACACTGACTTTCTACCG 57 11880430 11880507 TGTGCATAAACACTGAGGT 57 NA Drosophila melanogaster 61 CG8249 FBgn0034045 FBtr0087310 2 1 1 99 2R 11733106 11733196 TATGCTGGGTGTTGGTATGG 59 11733026 11733045 TGTGCCCAGTATAAGACTGC 59 NA Drosophila melanogaster 61 CG30087 FBgn0050087 FBtr0100573 1 1 1 80 2R 11580148 11580167 CATTGTGGAGGATCGATCCT 59 11580275 11580353 CAGTCGCAATCTTAGATTGGG 59 NA Drosophila melanogaster 61 Cyp6a23 FBgn0033978 FBtr0087452 2 1 1 119 2R 10764342 10764363 ATATTCAGGATCAACTTAGGGC 57 10764443 10764526 GAAGGGTTTCCATGACGAC 58 NA Drosophila melanogaster 61 CG10209 FBgn0033971 FBtr0087462 1 1 1 82 2R 10735470 10735716 AAGCTCACCATGGATCGAG 59 10735406 10735424 TTGCCCTCCATGTACTTGG 59 NA InUTR Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 2 2 2 142 2R 10638486 10638657 GAAAGCTGGCTATTACCTATTCG 59 10638366 10638384 CTGCACAATCACATCCTCG 59 NA Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 3 2 2 80 2R 10558087 10558168 GATAAGAACACCCAGCAAGTG 59 10558205 10558228 ATGAACTCTAGAAATCCTATCGGG 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 2 2 2 80 2R 10498983 10499136 AAGTTAAACCAGCTCGACG 58 10498921 10498940 CTTCTGACTCCGTCTTTGAG 58 NA Drosophila melanogaster 61 CG13016 FBgn0033899 FBtr0087519 2 1 1 89 2R 10045872 10045890 CTATCCTTGGGTTTCTGCG 58 10045943 10046015 CAGGTAGATGACCACAGGA 58 NA Drosophila melanogaster 61 CG13340 FBgn0033868 FBtr0087649 2 1 1 60 2R 9667199 9667217 TGAAACGAAGTTGGACGGA 59 9667157 9667175 TTCGGTATCGATGTTGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cbc FBgn0033842 FBtr0087701 2 1 1 99 2R 9371544 9371563 CTAATCCATCATGTGCTGGC 59 9371396 9371482 TATCCACTTCGGTTACGCA 58 NA Drosophila melanogaster 61 CG33470 FBgn0053470 FBtr0087656 1 1 2 80 2R 9300110 9300129 GCACTGTCACAATCGATAGG 58 9300171 9300246 TGAAACCGTTTCAGTAGTGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4734 FBgn0033826 FBtr0087754 1 1 1 80 2R 9185075 9185094 CAACCTTTGAGGATACCCAC 58 9184826 9185034 GATTGTTGCTCGATATGACCA 58 NA Drosophila melanogaster 61 Dh31-R1 FBgn0052843 FBtr0087755 1 1 1 80 2R 9161471 9162637 TATTTCAAATCCCTGAAGTGCG 59 9161412 9161431 CCACAACGAGTTATTGGCAG 59 NA Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 3 2 2 65 2R 9134723 9134741 TTACCAACACCATCTTCGC 58 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13321 FBgn0033787 FBtr0087792 3 1 1 98 2R 8841160 8841472 ACATGGGAGACTACACCTG 58 8841534 8841552 CAAAGATGGGATCCTGGTC 57 NA InUTR Drosophila melanogaster 61 CG17019 FBgn0033783 FBtr0087806 2 1 1 91 2R 8821092 8821183 GACTGCAAACGCTACTACTG 59 8821020 8821038 TCTGTCCTTGACAGTGGTC 59 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 2 1 3 279 2R 8225540 8226049 TTTCGTGGCAACATACACG 59 8226291 8226310 ATACACTGCGTAATCTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir48b FBgn0033648 FBtr0088080 1 1 1 60 2R 7589324 7589344 CCATGCTATATGTGAATCGCT 58 7589284 7589303 AGGAACCTCATGTAGAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088151 3 1 2 142 2R 7265747 7266485 TAATGTGCTGTTTGCGATCTC 59 7265625 7265643 ATATGATCAGGCCCGTGAC 59 NA Drosophila melanogaster 61 CG13202 FBgn0033623 FBtr0088157 1 1 1 68 2R 7243842 7243865 CTGTTTATAGCACTCAGAACTACG 59 7243736 7243754 TCACTGGACGAAGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13229 FBgn0033579 FBtr0088206 1 1 1 88 2R 7028206 7028313 GCTCTACAGATTCAACTTCTGG 58 7028139 7028160 GCATAAGTACTGCACTGATCAC 59 NA Drosophila melanogaster 61 CG30020 FBgn0050020 FBtr0088235 3 1 1 82 2R 6775657 6775676 GTCCAGCCATAATGATCCGA 59 6775718 6775796 TTGGCTTGATTCTTATCTGTGG 58 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 1 2 3 80 2R 6773588 6773606 TATTGAGTCCGGAATGCAC 57 6773647 6773726 CATTGGGATAACACTTAGAGGG 58 NA Drosophila melanogaster 61 CG12907 FBgn0250840 FBtr0088351 3 1 1 72 2R 6241505 6241526 CAAGTGCATTATATGGCATACC 57 6241626 6241646 TCCAGTTAAATATCCCATCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12129 FBgn0033475 FBtr0088395 1 1 1 102 2R 5920963 5920981 AGAGTCAACGTTGTTCACG 58 5921046 5921117 CATAAAGATCCGGCTCTTCG 58 NA Drosophila melanogaster 61 CG13739 FBgn0033403 FBtr0088558 2 1 1 104 2R 5238943 5238961 TACTCTCGAGCAGCAAGTG 59 5238622 5238641 CATGTAAGTCAGTCCGTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8046 FBgn0033388 FBtr0088621,FBtr0088620 3 2 2 80 2R 5051521 5051598 CGATCTTACAGGATGATTGCC 59 5051461 5051482 GTATGCATAACCAGAACCAAGG 59 NA Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 1 2 2 80 2R 4352035 4352053 AGTCCCAGACCCTTAAACG 59 4352096 4352168 GCTCGAGATACCGTTTAACG 58 NA Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766 1 1 2 75 2R 4257373 4257446 AATTTGATCGGAGCATGCC 59 4257316 4257334 TTCTTGGACCAATCGACCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pbp49 FBgn0260398 FBtr0300658,FBtr0300659 1 2 2 60 2R 4017065 4017083 CAGTTCAAAGCCTATCGCA 58 4017023 4017041 TAATGTCCTCCTCTTCGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 2 2 2 84 2R 3846784 3846863 TCAAGCATAGAGTGTTGACCT 59 3846720 3846738 GAGGCATCAATGCTTTCCG 59 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581,FBtr0112579,FBtr0112578,FBtr0112580 2 4 4 88 2R 3724812 3724830 GAGTAAGAAACTACGCGCC 58 3724659 3724760 CTCCAAAGTCCTGAATGGC 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088834 1 1 4 150 2R 3700485 3700791 CATGGACCTAGAGGATCCC 58 3700905 3700923 GATATCCACGAAGAAGCCG 58 NA Drosophila melanogaster 61 CG12736 FBgn0033184 FBtr0088981 2 1 1 84 2R 3397262 3397284 CCATATTGGGTATTCCACTACAG 58 3397134 3397224 CGAGATCATGTTCTTTATGTAGTCC 59 NA Drosophila melanogaster 61 CG11127 FBgn0033178 FBtr0088975 2 1 1 60 2R 3351151 3351169 CCTGCTGATGTACAAGACC 57 3351191 3351211 GAAGTTGACGTACTTGAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30156 FBgn0050156 FBtr0086184 1 1 1 80 2R 2869296 2869316 TGGAAGTAGAAATCGAGGAGG 59 2869179 2869256 ACAGATTATCCCTCCAACTCC 59 NA Drosophila melanogaster 61 CG9460 FBgn0033115 FBtr0086164 3 1 1 85 2R 2775491 2775575 TGGAGCAACCTTTATCAAGGT 59 2775622 2775640 AGAAGAAGGGATGATCCGC 59 NA Drosophila melanogaster 61 SdhB FBgn0014028 FBtr0086156 1 1 1 137 2R 2695986 2696004 ACTTCTACGAGCAGTACCG 58 2696161 2696179 ACAGGATGCACTCGTACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Epac FBgn0085421 FBtr0112636,FBtr0112635 2 2 2 99 2R 2655059 2655638 ATTGCGCAAACCTTCTCAC 59 2654978 2654996 TATGCTGGTCGACAAGTGG 59 NA Drosophila melanogaster 61 Mob4 FBgn0259483 FBtr0086141 3 1 1 83 2R 2583760 2583853 AAATCCAAGGACTTCTGTCG 57 2583696 2583714 CTGCTGTATGTACTGCTGC 58 NA Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 3 1 1 60 2R 2495562 2495639 CGGTACAAAGTCGTTGCAG 59 2495520 2495541 TTGATACCACAATACCAGTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7856 FBgn0033056 FBtr0086024 2 1 1 60 2R 1946072 1946091 GATCAGGAGAAGATAGCGGA 58 1946031 1946050 TGCTGCTAAAGCGATTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SCAP FBgn0033052 FBtr0086027 1 1 1 80 2R 1922792 1922810 CTCTTCCTGTCCAGCTACC 59 1920211 1922750 GTTGATTAACGGATAGCACGA 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG30441 FBgn0050441 FBtr0299872 3 1 1 144 2R 1239551 1239569 GAGTTGAGCATCCAAACCT 57 1239425 1239444 TCCTTATCGACATCTTTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 d4 FBgn0033015 FBtr0086083 2 1 3 105 2R 1182467 1182485 ATGAGTCTTACACCAGCCG 59 1182554 1182630 CGACGATTGCCTTTACGTC 59 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 1 3 3 102 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980105 980126 CTCCTTTGATTACAAGCTTCGA 58 NA Drosophila melanogaster 61 CG40127 FBgn0058127 FBtr0111266 2 1 1 91 2R 75327 75347 CCCTCATTGAGGACTTACCTC 59 75189 75277 GTAGGCATTCTGATTGTATGCT 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2263 FBgn0082990 FBtr0113537 1 1 1 60 2L 5187849 5187868 GATTATTGGATGCTGGCGTG 60 5187888 5187909 TTTATGGAGTGATGCGATTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U5:38ABa FBgn0043022 FBtr0081315 1 1 1 60 2L 19811986 19812010 GGAACACTCTAATGAGTCTAAACTC 59 19811950 19811971 GCCCAACTAAATATTTAGCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33884 FBgn0053884 FBtr0091888 1 1 1 60 2L 21498225 21498244 AGAAGAACATCACCAAGACC 57 21498184 21498202 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8677 FBgn0026577 FBtr0081477 2 1 1 80 2L 21221720 21221738 AAGGACCTGGGTCTTAACC 58 21221782 21222449 CCTTAGCTCAGGAACATCG 57 NA Drosophila melanogaster 61 CG9336 FBgn0032897 FBtr0081427 1 1 1 80 2L 20859882 20859900 GAAGAAGACCCTCGAAAGC 58 20860721 20860742 GCTTGGATATTGTTGATGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14402 FBgn0032894 FBtr0081425 2 1 1 60 2L 20849929 20849948 CTGAGTAAGTTCTTCGGCCA 59 20849971 20849989 GAGCCTGATCCCTAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12617 FBgn0040996 FBtr0081351 3 1 1 126 2L 20294780 20294890 CATCTTTGGGAGCAACATGAG 59 20294978 20294996 CATCGGAAATCGAGGAGGA 59 NA InUTR Drosophila melanogaster 61 CG10747 FBgn0032845 FBtr0081341 3 1 1 143 2L 20090935 20091011 TCTGGCTATTCCAGGTTCC 58 20090810 20090828 GAAGATTGCGTCTTGCTCC 59 NA Drosophila melanogaster 61 Nf-YB FBgn0032816 FBtr0081289 3 1 1 119 2L 19736472 19736490 GGAGAATCGCAAGACAGTC 58 19736573 19736644 GATTTGTTCGACTCTCGGT 57 NA Drosophila melanogaster 61 CG31797 FBgn0051797 FBtr0081227 3 1 1 60 2L 19259919 19259937 AAAGTCTGTCCACCTTGTC 57 19259877 19259898 GATCCATGAAGTGACAGATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31793 FBgn0051793 FBtr0081138 1 1 1 80 2L 19006225 19006246 TCCTGATAATGCTGTGTATTGG 58 19006285 19006364 CTGTGTTCTTAACCCAGTAGG 58 NA Drosophila melanogaster 61 CG42502 FBgn0260228 FBtr0300635 3 1 1 93 2L 18810679 18810831 TGAAGCAAGCAAGATTGGG 58 18810604 18810625 AGGGTGAGTACTTTAAGTTCCT 58 NA Nonspecific Drosophila melanogaster 61 Cyp310a1 FBgn0032693 FBtr0081077 2 1 1 80 2L 18651978 18652051 AGAACCGATTAATGATGCAGAC 59 18651919 18651942 AGAGATACTTTCAAGAGATCCTCG 59 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0302454,FBtr0081031 1 2 2 87 2L 18082141 18082229 CATTTACCTTCATTGGCTGCT 59 18082278 18082296 CATTCGCATTTAGGGCCTC 59 NA Drosophila melanogaster 61 CG31743 FBgn0032618 FBtr0080947 1 1 1 80 2L 16885726 16885805 AACGTAGTGGGCAAATACGA 59 16885846 16885866 GAATGTTAGATTGTCGGCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG31810 FBgn0051810 FBtr0080925 3 1 1 80 2L 16850207 16850225 TCAGGGTCTTAACCTGGTG 58 16850082 16850166 TTATATTGGCTCCCAATCTCGT 59 NA Nonspecific Drosophila melanogaster 61 CG31807 FBgn0051807 FBtr0080944 2 1 1 61 2L 16682285 16682303 CAGCTCTTAGCGGAAAGGA 59 16682242 16682262 ATATTTAGCTTCGCCAGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31817 FBgn0028899 FBtr0080842 1 1 1 60 2L 16336330 16336348 AAAGGCACGATACACAACC 58 16336228 16336308 TTTGCTTGTCTATGGGATCTC 57 NA DesignNoJunction Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 2 2 2 80 2L 16308315 16308401 AGAAGCTCACAATGTTGGC 59 16308442 16308463 TGATGATATAGGTCAGCTCCTG 59 NA Drosophila melanogaster 61 CG33310 FBgn0053310 FBtr0080698 2 1 1 60 2L 15028869 15028889 TTGATCCTAGAAACAGCACAG 58 15028909 15028929 TCCAGAAGAGCCATTATACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dyn-p25 FBgn0040228 FBtr0080694 2 1 2 95 2L 15004047 15005966 CTGTTGGACTAGTGCTTCG 58 15006025 15006043 CTCTGTACGATCACCTTGC 58 NA Drosophila melanogaster 61 CG8997 FBgn0028920 FBtr0080563 1 1 1 123 2L 13845285 13845303 GGTACTACGATCAGTCGGT 58 13845116 13845198 ATCGACTGGGTTTCAATGG 57 NA InUTR Drosophila melanogaster 61 ics FBgn0028546 FBtr0080511 2 1 1 81 2L 13639910 13639928 CATCGCCGAGCAATATCTG 59 13639784 13639869 GCGGTTGTAGATGATCTTATAGG 58 NA Drosophila melanogaster 61 CG33644 FBgn0053644 FBtr0091621 1 1 1 111 2L 13532348 13532366 GTTGATTGCCGATGAGCTG 60 13532512 13532534 GGGTATAACCTTTGGATTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10859 FBgn0032520 FBtr0080522 3 1 1 155 2L 13397000 13397019 AATACAAGTACGCCGTTACC 58 13396800 13396885 GTTCAAACATCGACATCATGAG 58 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0080498,FBtr0100220 1 2 3 80 2L 13384733 13384755 AAGTATCCCAGTTCCATAAGACC 59 13384792 13385002 TGTTCTTCAAGCAAGTCTTCTG 59 NA Drosophila melanogaster 61 CG9305 FBgn0032512 FBtr0080471 2 1 1 91 2L 13372759 13372777 ATTGGAGATCGAAACCACG 58 13372628 13372706 CATTATCTCCCGTAGTCTCGT 58 NA Drosophila melanogaster 61 CG6523 FBgn0032509 FBtr0080465 3 1 1 92 2L 13366985 13367006 CTGATGATATTCATGAAGGGCG 59 13367059 13367140 GTACGGCAAGTTGGTTTCG 59 NA Drosophila melanogaster 61 Edem2 FBgn0032480 FBtr0080438 1 1 1 81 2L 13194888 13194906 TGAGTTCGTCTTCACGACC 59 13194951 13195143 CTGGCGAAAGCTAAACGTG 59 NA Drosophila melanogaster 61 Pk34A FBgn0028410 FBtr0080432 3 1 1 123 2L 13158819 13158840 TGCCTTGCTAGATTTATTGGAG 59 13158983 13159003 GAATGATGAGTGGAACTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Oatp33Eb FBgn0032435 FBtr0080370 3 1 1 80 2L 12448712 12448811 CAACAATATACCCGATGACAGC 60 12448852 12448870 GCATATTTCTGGCATCCGG 59 NA Drosophila melanogaster 61 CG6785 FBgn0032399 FBtr0080307 3 1 1 118 2L 12042418 12042436 GATTCCTTCTACGCTCCGT 59 12042226 12042336 TAAGGCGATCTGCTAGGAG 58 NA Drosophila melanogaster 61 Rh5 FBgn0014019 FBtr0080291 3 1 1 81 2L 12008613 12008634 CTACATTGCCTTTATCGTCCTC 59 12008672 12008752 GGATTTCGAAGTCGAGAATATCC 59 NA Drosophila melanogaster 61 escl FBgn0032391 FBtr0100626,FBtr0080286 3 2 2 127 2L 11991264 11991341 AAATATAGCTCCCATGTCCG 57 11991429 11991449 TCATAAATGGAAACCCGATCC 58 NA Drosophila melanogaster 61 CG31704 FBgn0051704 FBtr0080273 3 1 1 60 2L 11840796 11840816 TGTCCTCGAAACTATGATCCT 58 11840835 11840856 CACACTGGTTACTATAGGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)gd1 FBgn0250747 FBtr0080197 3 1 1 80 2L 11109227 11109246 GAATCAGCTACAATGTGGCC 59 11109287 11109365 AAGATTCATCATTGAGCAGGG 58 NA Drosophila melanogaster 61 l(2)gd1 FBgn0250747 FBtr0080197 1 1 1 80 2L 11110240 11110329 CACATATGATCTAATGGATGGTCG 59 11110366 11110386 GTGAGAATAGGATTGCGAACG 59 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 3 2 2 81 2L 11100218 11100310 CAGGAAATAGAAGTCATCCATTTCC 60 11100161 11100181 TGAGGACCTTGGTCTTATTGG 59 NA Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 2 2 2 60 2L 10843766 10843784 GTCGATTGTATGGACTGCT 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080137 1 1 2 80 2L 10790354 10790433 GTCTAGGAACTATGGACCTGG 59 10790475 10790493 CCGAAGGAGAACTGAGGTC 59 NA Drosophila melanogaster 61 w-cup FBgn0032269 FBtr0080132 2 1 1 112 2L 10576841 10576859 CTGAGTGCAAAGGAAGGTG 58 10576687 10576771 CTGTGACTAGTAGATGTAGATAAGG 57 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 1 4 4 80 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415400 10415480 GCTGAAGGTACTTTAAGGCA 57 NA Drosophila melanogaster 61 RpS27A FBgn0003942 FBtr0080016 1 1 1 86 2L 10409974 10409994 AAGAAGAACTACTCCACTCCC 59 10410037 10410249 CTCGTCAACCTTGTAGTATTTCAG 60 NA Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 3 1 1 154 2L 10201528 10201616 GTATCAACAAGGTGGCTCC 58 10201734 10201752 CTTCAGATTGGGATAGCCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13127 FBgn0032176 FBtr0079933 1 1 1 60 2L 10028848 10028866 CCTTCTTTGCCTACATGCC 58 10028887 10028908 GATTTCCAAATATGCTGACGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9515 FBgn0032077 FBtr0079791 2 1 1 60 2L 8942533 8942552 CTGCCAGAACAAATTCAGAG 57 8942436 8942511 AAGCACCAGCTTTATCTAGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 emb FBgn0020497 FBtr0079663 2 1 1 80 2L 8406223 8406244 CACCTTTATTGACGAGATTCTC 57 8406284 8406392 TCATAGAACGTGTGAACCTG 57 NA Drosophila melanogaster 61 Rcd4 FBgn0032034 FBtr0079652 1 1 1 65 2L 8383245 8383265 AGGATTCTAACTTTATCGCCC 57 8383356 8383374 ATACAACACGATTCGGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 Mur29B FBgn0051901 FBtr0079607 2 1 1 90 2L 8354724 8354742 CTTCGCCATCCATAAGCAC 59 8354796 8354887 CGGTTTAACTCTCCGTCCT 59 NA Drosophila melanogaster 61 CG7196 FBgn0031944 FBtr0079482 3 1 2 276 2L 7763373 7763391 GAACTAGCCAACGATCCCA 59 7763692 7764554 CTTCGTTATCGATGCGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0079354,FBtr0302162,FBtr0290119 3 3 3 81 2L 6976420 6976439 ATCACCTACATTGCATCCGA 59 6976286 6976376 CTGGACAGAAGTCGGTCAG 59 NA Drosophila melanogaster 61 Coprox FBgn0021944 FBtr0079352 3 1 1 67 2L 6965518 6965536 TTGATCTACGATCGTGGCA 58 6965567 6965585 ATCAGGATGCTCTCGTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079336,FBtr0079337 1 2 2 90 2L 6775883 6775974 ATATACCCAAGTTTGACGAGAG 57 6776025 6776043 ATGATCTCCTCGTGAGCTC 58 NA Drosophila melanogaster 61 CG11322 FBgn0031856 FBtr0290242 1 1 1 60 2L 6758195 6758214 AGAGATGTACGATTGGACCC 59 6758154 6758174 CCAAATAAAGCACTTGAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31910 FBgn0051910 FBtr0079304 3 1 1 109 2L 6745248 6745266 AGTTCAGAGCAGAGCTGTC 59 6745102 6745175 TTGTTGTTTGAAGCTCGCA 58 NA DesignNoJunction Drosophila melanogaster 61 osm-6 FBgn0031829 FBtr0079333 3 1 1 86 2L 6556351 6556425 CAATGATGTGGAGCTGAGC 59 6556283 6556301 ATCGAATCGATCAGGCAGG 59 NA Nonspecific Drosophila melanogaster 61 CG9542 FBgn0031821 FBtr0079265 3 1 1 67 2L 6488450 6488468 GAATTTGGCCGTGCTAGAG 59 6488349 6488367 GCTTCTCAGTCAGTTCCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9500 FBgn0031804 FBtr0079280 3 1 1 85 2L 6358072 6358150 GCTATCAGAAACAAACCCGA 58 6358006 6358026 TCAGTACTAGCATTGGATTGG 57 NA Drosophila melanogaster 61 CG13991 FBgn0031785 FBtr0079202 1 1 1 60 2L 6143892 6143911 TAGCCTCAAGAACAAGACCT 58 6143932 6143952 GTGAATGGACAATGTGAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 1 3 3 87 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095143 6095248 GTAGAGCGGATTCATATTTGGG 59 NA Drosophila melanogaster 61 Fbw5 FBgn0031773 FBtr0079215 2 1 1 80 2L 6065240 6065315 GGATATGTGATAATCTGGAACGC 59 6065182 6065200 GTACTTCCAGCTGAACTGC 58 NA Drosophila melanogaster 61 CG13995 FBgn0031770 FBtr0079187 2 1 1 80 2L 6058612 6058633 ATCTTCTACAAGAACTTCGGCA 60 6058671 6058767 GTAGAAGTAGCCTAGCAGAAGG 60 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 3 3 3 116 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044243 6044262 TTATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 ifc FBgn0001941 FBtr0079179 3 1 1 121 2L 5986787 5986805 GACACAGCAGACCTATGCA 59 5986889 5987631 CTCATCACCTTGGTAACGGT 59 NA Drosophila melanogaster 61 CG34011 FBgn0054011 FBtr0100066 2 1 1 86 2L 5717148 5717169 CTTCATCAACATTCTGGAAACC 58 5717214 5717341 AGCTCCTTGGAATAATGTTCC 58 NA Drosophila melanogaster 61 CG31646 FBgn0051646 FBtr0079114 1 1 1 80 2L 5645498 5645520 AAATAAGGATGAGCTACTGGAGG 59 5641937 5645462 CCGAACTTTGGAAGATCTTTCTC 59 NA Drosophila melanogaster 61 CG34124 FBgn0083960 FBtr0110838 3 1 1 80 2L 4964235 4964308 CTGGACCAGATTGAATGCC 58 4964349 4964370 GAACTCGTAATTGATTTGCAGC 59 NA Drosophila melanogaster 61 Jon25Biii FBgn0031653 FBtr0079056 1 1 1 60 2L 4950668 4950686 GGTCTTCGTAAAGGACCTG 57 4950626 4950645 GTATCCGTTGGTGATACGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hoe2 FBgn0031649 FBtr0077394,FBtr0114514 3 2 2 80 2L 4935313 4935332 CTTTGGATTTCTGACTGTGC 57 4935175 4935272 GGAAGTATATCCTGGAACACC 57 NA Drosophila melanogaster 61 Sfp24Bb FBgn0259952 FBtr0300297 1 1 1 80 2L 3669576 3669654 AACAGTCGGAAGTCAAATGC 59 3669515 3669539 TCGAATAGCTATACCCTATAATCCG 59 NA Drosophila melanogaster 61 CG8837 FBgn0031520 FBtr0077583 1 1 1 88 2L 3322749 3322827 TGATAGAGGCATTCAATGCG 58 3322878 3322896 CACGAATATTGAGGCTCCG 58 NA Drosophila melanogaster 61 CG17260 FBgn0031498 FBtr0077653 2 1 1 60 2L 3038303 3038324 GTCCCATATGTGATAGTACCGT 59 3038342 3038363 TTGTCATCCGTTTCTATGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha4GT1 FBgn0031491 FBtr0077670 3 1 1 81 2L 3022959 3023045 GATGTGGCGTACATAGAATCTC 58 3022899 3022918 GAGGATGATGAACATCCTGC 58 NA InUTR Drosophila melanogaster 61 Prosbeta4R2 FBgn0031443 FBtr0077699 3 1 1 92 2L 2655539 2655622 TGGTCTTCATGAAAGATGACCA 59 2655675 2655693 ACTGAATGGTATCGCCACC 59 NA Drosophila melanogaster 61 Prosbeta4R1 FBgn0031442 FBtr0077697 2 1 1 61 2L 2653185 2653203 CATACTGGCCTCGGATACC 59 2653228 2653297 TTCTGACCTCGTCATCCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4272 FBgn0028485 FBtr0077763,FBtr0077762 2 2 2 85 2L 2368137 2368155 GACTCTTTGCTAGTGGCTC 58 2368204 2368324 GGAAGTGATCTGAGTGCTG 58 NA Drosophila melanogaster 61 CG33124 FBgn0053124 FBtr0300181 1 1 1 80 2L 2208656 2208677 AGATGAACGAGTATCTGATGGG 59 2208537 2208618 CCGAAATGAAACTCGCTATCAG 59 NA Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077849 1 1 2 118 2L 2191941 2191959 GACCTATGTGAATGAGCGC 58 2190776 2191859 CATCGGGAACTTTCAGGAG 57 NA Drosophila melanogaster 61 CG17712 FBgn0027597 FBtr0077903 3 1 1 60 2L 1751858 1751877 TCCATACGAACGTAATCGAC 57 1751817 1751835 ACGATGAACACCAGATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 haf FBgn0261509 FBtr0077875 1 1 1 83 2L 1601904 1602331 GACTTGCAGGTTACATCGC 59 1602378 1602396 AATGGAGTAGAAGCCTCGG 58 NA Drosophila melanogaster 61 lea FBgn0002543 FBtr0077941 1 1 1 80 2L 1397108 1397126 AACTGAAGACGGATACGGG 59 1395990 1397067 TACGTGAGTGGATAACCTTGAG 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 2 6 6 154 X 19417821 19417839 GCACAAACACGATCTGGAG 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 Nat1 FBgn0031020 FBtr0074711 3 1 1 98 X 19376332 19376351 CAAGGGTCGCATCTTTAAGC 59 19376410 19376496 GAATTGATGTAGCGATCTGCC 59 NA Drosophila melanogaster 61 TwdlX FBgn0052571 FBtr0074325 2 1 1 144 X 16626029 16626155 CATTCAGGCCAACTATGATGC 59 16626261 16626279 CACAATGTTCACGCTACCG 59 NA Drosophila melanogaster 61 CG2200 FBgn0030447 FBtr0073721 3 1 1 119 X 12988696 12988815 CTCTTCAAGAGTGCCAATGTG 59 12988896 12988914 TCCCTCCACATTGAATCCC 59 NA Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0301515 3 1 2 104 X 2030572 2030592 TTTATGTAAGATCGCGTGCAC 59 2025749 2030506 CTGTGTCCGCTAGTCACTC 59 NA InUTR Drosophila melanogaster 61 jar FBgn0011225 FBtr0301371,FBtr0301367,FBtr0301369,FBtr0301370,FBtr0084636,FBtr0301368 3 6 6 82 3R 20082819 20082910 CACGGTTATCATGGTTCCTC 58 20082756 20082775 ATAGTCGACTGTAGATGGCC 58 NA Drosophila melanogaster 61 CG15922 FBgn0040575 FBtr0083951 1 1 1 217 3R 16385756 16385774 TAAAGATGAGCAAGCAGCC 58 16385496 16385514 GAGGGTTTGTCATTCCGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083313 1 1 2 80 3R 12277855 12278366 CTTCATCACCGAAGATACGA 57 12277794 12277812 AGCTCAACGTAGATTTCGG 57 NA Drosophila melanogaster 61 CG5342 FBgn0037916 FBtr0301159 2 1 1 63 3R 7405305 7405327 CCTATTCACTTCTAATCTTGGCG 59 7405400 7405418 GGATTCAACTGCCAGACTG 58 NA DesignNoJunction Drosophila melanogaster 61 Bruce FBgn0037808 FBtr0082239 3 1 1 80 3R 6145092 6145167 CAACCAAGTGAGGTTACCA 57 6145030 6145048 TAACTGCTCCGCTTTAGTC 57 NA Drosophila melanogaster 61 Nufip FBgn0036812 FBtr0075088 2 1 1 192 3L 18741147 18741225 CAAGAACAAAGCAGCCCAG 59 18740973 18740991 GACGTTCCAGGATGTTGTG 58 NA Drosophila melanogaster 61 CG32246 FBgn0052246 FBtr0073316 2 1 1 70 3L 4622735 4622753 GATGTGGATCGCATTCTGG 58 4622785 4623282 AACTTCATTTCCTTAGCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Ubi-p63E FBgn0003943 FBtr0073177 3 1 3 61 3L 3903014 3903033 AACACCAATCCTAACAAGCC 58 3901739 3901758 AGTCTTCACAAAGATCTGCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13506 FBgn0034723 FBtr0071822 3 1 1 80 2R 18274014 18278489 GCTAATTGGACAACTATACGTGAG 59 18278528 18278546 TCGTCGTCCTGATAATCCG 59 NA Drosophila melanogaster 61 CG9235 FBgn0034560 FBtr0071517 3 1 1 60 2R 16798010 16798030 ACTTAGCTACCTCATGTCACC 59 16798049 16798070 GGTTAGGGATCCATTGTAACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8187 FBgn0034027 FBtr0087355 1 1 1 80 2R 11428010 11428029 TCTGGAGCTCAAGAATGTCC 59 11427896 11427971 CCATGTACTCCAGTCATATTGAG 58 NA Drosophila melanogaster 61 CG8878 FBgn0027504 FBtr0088018,FBtr0088017 3 2 2 89 2R 8034897 8034915 TGAAGAGGAGAACCAGGAG 58 8034688 8034844 CTATCCGATTCATCCTCGC 57 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 3 6 6 85 2R 2141683 2141701 TTCGCAAATACCAGGAGGA 58 2141749 2142358 CAAGTAACCCTGAATGTCGT 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111249,FBtr0111247,FBtr0111245,FBtr0111246 1 6 6 100 2L 22741969 22741987 GCAGGTCAATTGTACAGCA 58 22742101 22742174 TCAATGTATTCACCCGCCA 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232,FBtr0081230,FBtr0081229 3 3 4 90 2L 19183325 19183396 AAATCATCATGTGCTGCGG 59 19183253 19183271 GGTACACAGCAGAGTTCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717,FBtr0079718 3 2 2 138 2L 8391199 8391291 CAAAGCGACTTACAAGGGA 57 8391079 8391097 AATTCGTTGCAAGCAACAC 58 NA Drosophila melanogaster 61 Cog3 FBgn0031536 FBtr0077573 2 1 1 80 2L 3455277 3455353 AATGATGGAGAGCATTGCC 58 3455215 3455233 CTGGAAACCATGGAGTTGC 59 NA Drosophila melanogaster 61 betaggt-II FBgn0028970 FBtr0077631 2 1 1 60 2L 2880264 2880282 GTTCATACTGTCGTGCCAG 58 2880306 2880324 CATGTTGCCAGTTCTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15824 FBgn0031292 FBtr0078029 1 1 1 80 2L 881689 881710 AGTGTGGTCCACTTCTATATCG 59 881568 881653 CTGGAATTCTATATCTTTCAGCCG 59 NA Drosophila melanogaster 61 CG4749 FBgn0031308 FBtr0077959 3 1 1 60 2L 1149218 1149238 ACAACTACCATCAAGGATCTG 58 1149260 1149278 CGAACTTGAAGACATCGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2813 FBgn0031268 FBtr0078069 2 1 1 80 2L 575077 575150 ACTACTTTGTCATTAGTGGCG 58 575191 575210 CAAGTCCTAATAGTGCGGTG 58 NA Drosophila melanogaster 61 CG32071 FBgn0052071 FBtr0076231 1 1 1 103 3L 11096906 11096924 TATCCCTGGTCATCTTGGC 58 11096821 11096839 AGTGGATGAGCTACTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL23A FBgn0026372 FBtr0072805 3 1 1 155 3L 1667723 1667814 AAGAAGATCATCAAGGGCG 57 1667586 1667604 GATGATGTTGTACGCGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ptc FBgn0003892 FBtr0089427 2 1 1 80 2R 4548003 4548358 GTTATACCAGGCCTCAACC 57 4548399 4548420 CATCTTCTGCTTCATATACTGC 57 NA Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 3 2 2 273 2R 18728511 18728591 TTTCCGGAGTTCGAATGGA 59 18728828 18728846 TAGCCAGATGCTCTGTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31475 FBgn0051475 FBtr0083735 3 1 1 119 3R 15026319 15026339 AGCTACTGAACTATGTGAACC 57 15026418 15026509 GATCAGTCATCTCTTTGAGGG 58 NA Drosophila melanogaster 61 CG10956 FBgn0034195 FBtr0110777 3 1 1 80 2R 13010761 13010782 CGGAGTTATTCATGTAGTCACC 58 13010641 13010723 AAACTACCATTGCCAACATCTG 59 NA Drosophila melanogaster 61 Shawn FBgn0031039 FBtr0074738,FBtr0074737,FBtr0074739 1 3 3 116 X 19508311 19508329 TGTTTCCTCTACTGCAACG 57 19508409 19508486 GATGAATGCGTCAATGGTG 57 NA Nonspecific Drosophila melanogaster 61 CG13218 FBgn0033587 FBtr0088195 3 1 1 64 2R 7120941 7120959 GAGGTGGATTCATTGGTGG 58 7120895 7120914 ATAGCTTTCCTTGTAGCGTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 3 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific Drosophila melanogaster 61 ATbp FBgn0039946 FBtr0301978 3 1 1 82 XHet 85032 85050 GTTGCAGACACAGGATCAG 58 85096 85174 TACGACTGTGTTCCTTTGC 58 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-3342 FBgn0086667 FBtr0091788 1 1 1 117 X 5418436 5418454 GACAAATCATACGTGCCCA 58 5418337 5418355 TTGTTTCTCGTCCTTGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dod FBgn0015379 FBtr0077193 3 1 1 145 X 21216530 21216663 CCACAGGAATGAGCTATTATCTC 58 21216768 21216786 CTTAACCAGCAGATGCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15452 FBgn0031130 FBtr0077292 2 1 1 92 X 20616443 20616721 ATCGATGTGCCATGATTCG 58 20616369 20616388 TTATCCTGTTCGACCTCCTC 58 NA Drosophila melanogaster 61 CG9576 FBgn0031091 FBtr0070027 2 1 1 242 X 20056465 20056575 ACTGCTTGTACCTCAGCTC 59 20056241 20056259 AGAACGAGTTGTACGTGTC 57 NA DesignRelaxed Drosophila melanogaster 61 e(y)3 FBgn0087008 FBtr0074762 2 1 1 104 X 19524174 19524280 TTCAACAAGTCCCGTAAGGA 59 19524089 19524107 CTCTAGGCGTGTACAGGTG 59 NA Drosophila melanogaster 61 CG7326 FBgn0030970 FBtr0074653 3 1 1 60 X 18756516 18756534 TGAGAACGAGGATCAACAC 57 18756474 18756495 CATTTGATCCGTAAACACATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6900 FBgn0030958 FBtr0302363 2 1 1 122 X 18679919 18679937 AAGATGTCCACGGACAAGG 59 18680096 18680114 AACTTGGAGGTTCAGTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG15047 FBgn0030938 FBtr0074596 3 1 1 76 X 18423091 18423109 ATCAGAGGATCGCACAGAC 59 18423149 18423167 CTCGGACAGTAGCAGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 2 2 2 80 X 18055281 18055302 AGTTGAAACAGGATACCATCGA 59 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 2 3 7 169 X 18007407 18007490 AGAAACTCAGGTTGCTGCT 59 18003569 18003592 CTCGTAATACTCTTCGCAAATCTC 59 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 2 3 3 80 X 16870115 16870133 TTTCTAGTCGCACCTGACC 59 16869872 16870073 CTCGTATACGTGATGTCTGGA 59 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 1 2 2 105 X 16312123 16312141 GATCCGTGTGATCATCACG 58 16311920 16311998 AGTATCGCCCTTGATCCAG 59 NA Drosophila melanogaster 61 CG8578 FBgn0030699 FBtr0074104 3 1 1 83 X 15740366 15740445 TGCAGGGTTCTTTAGACGT 59 15740492 15740510 GTTCGTGAAGCTTCTGCAC 59 NA Drosophila melanogaster 61 CG9114 FBgn0030628 FBtr0074020 1 1 1 93 X 15225596 15225614 TCAGTTGATCCAAGCCCAG 59 15225465 15225487 GATGTTGGAAGACTGAAAGTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13402 FBgn0030538 FBtr0089267 1 1 1 60 X 14065797 14065815 AGTCGATCTACCTGTCCTC 57 14065755 14065773 TTTGGATAGAGCTGCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32613 FBgn0052613 FBtr0073887 1 1 1 80 X 13847250 13861313 TTTAGTTTAAGGTGAGTGGCG 58 13847190 13847209 CAATCCTTGTGTCAAACCGT 59 NA InUTR Drosophila melanogaster 61 Rbp1-like FBgn0030479 FBtr0073790 2 1 1 164 X 13278469 13278487 GTCGAAATGTCATCAGGCC 59 13275067 13278341 TGAGCGTGATCTATAGCGT 58 NA Drosophila melanogaster 61 Cyp4g15 FBgn0030304 FBtr0073503 3 1 2 109 X 11373129 11373147 CGAGAACTCGCGTAATGTG 59 11373217 11375566 TCGCAGTCTCCAATAGAATCTC 59 NA Drosophila melanogaster 61 Sk1 FBgn0030300 FBtr0073497 1 1 2 130 X 11336741 11337617 TACAAGGTCAAAGAAGCGC 58 11337711 11337729 GTTCATGCGTCTTTCCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 3 4 4 81 X 11055270 11055357 ATGAGTACAGAGACGACATGAC 59 11055397 11055417 GCATAGTGTAGCAGGTTTGTG 59 NA Drosophila melanogaster 61 Hsp60 FBgn0015245 FBtr0073434,FBtr0073435 2 2 2 171 X 11005432 11005514 CAACGAGGATCAGAAACTCG 58 11005648 11005666 GATCAGGTTGCCGTATTCG 58 NA Drosophila melanogaster 61 sofe FBgn0030242 FBtr0073409 3 1 1 60 X 10750423 10750441 GATTGCCTTCATCGAGCAG 59 10750381 10750401 TTTCAGTGAAAGATCCCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht6 FBgn0030171 FBtr0071416,FBtr0112972 2 2 2 81 X 9925206 9925224 GGTTAACCATCATGCTCCG 58 9925264 9925353 GGAGTAGTCAATATTTAACTCGGC 59 NA Drosophila melanogaster 61 CG1514 FBgn0029976 FBtr0071092 2 1 1 82 X 7809912 7809930 ATCTACGTAAGCGACCGTC 59 7809974 7810055 CTTCCGTTGTAGTTCATGGAC 59 NA Drosophila melanogaster 61 Grip FBgn0029830 FBtr0070865 2 1 1 82 X 5876618 5876795 GTCGATAATGTCTCACTGATTGG 59 5876837 5876855 GTGTAGCCGGAAACATGAC 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0070745,FBtr0299588,FBtr0299589,FBtr0290088 1 5 5 80 X 5144536 5144554 CCTAGCACCACTTTATGCC 58 5144596 5144770 AGAAGGTATTTCTGATCGTGG 57 NA Drosophila melanogaster 61 Ptp4E FBgn0004368 FBtr0301794,FBtr0070725,FBtr0070724,FBtr0301795,FBtr0301796,FBtr0301793 3 6 6 89 X 4844925 4845008 GGAGGATTTAAGCTCTCCCA 58 4845060 4845078 TTGGAACTGGCTTGAACCT 59 NA Drosophila melanogaster 61 CG15473 FBgn0029719 FBtr0070689 2 1 1 190 X 4548256 4548448 ATGGCAATCTTGCCTTTGG 59 4548084 4548104 ACGTATGTGACATGCTTAAGG 58 NA Drosophila melanogaster 61 cib FBgn0026084 FBtr0070641,FBtr0070639 2 2 3 63 X 4004036 4004195 TAAGGAAGCCATCGAGCAG 59 4004222 4004240 ATCAAAGTTCTCGATGCCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rab27 FBgn0025382 FBtr0070293,FBtr0070294 1 2 2 129 X 1368733 1368751 AGTTCATCTCCACTGTGGG 59 1368458 1368476 GTGGTTAGTGAACGGAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11380 FBgn0040359 FBtr0070201 1 1 1 81 X 1088558 1088578 AAGGTGGAGAGGGATAATTCC 59 1088620 1088707 AGTAGCCGTATCCCAAATCC 59 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 3 2 8 85 X 550804 551137 CATAACCTGCAAGAGAAAGC 57 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 1 3 8 60 X 550407 550425 GTCACTATAGCCGTTTCGT 57 551147 551166 AGATTGCAACTTGATGCTGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41606 FBgn0085816 FBtr0114274 3 1 1 65 U 4100838 4100856 AGCTGTTCTACCGACAGAG 58 4100885 4100903 ATATGAGAGGTCGGCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 zfh2 FBgn0004607 FBtr0089070 3 1 1 80 4 551658 551679 GATGTTAAGTACTGAGGAGACC 57 551717 551800 ACATCACTTCCTGAAACTTCTC 58 NA Drosophila melanogaster 61 CG9747 FBgn0039754 FBtr0085573 3 1 1 83 3R 26013164 26013182 ACCCACAAGAGCTACAAGG 59 26012532 26013117 GTACAGGGTGTTCTGTCCA 59 NA Drosophila melanogaster 61 CG7903 FBgn0039730 FBtr0085608 3 1 1 80 3R 25820789 25820879 TGAATACTACCGCCAAGGTG 59 25820728 25820748 CATAGTTGGTGAACAGTCGAC 59 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352,FBtr0085354 3 3 3 84 3R 24652017 24652038 AAGCAATACAGTGTAGAATCCC 58 24651887 24651974 GGTTGCCATTAGATGGATGAC 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582,FBtr0112583 2 3 3 131 3R 23904346 23908635 CGAGTAAAGAGAACATCAAGCC 59 23908727 23908745 TCTTCTGGAGGACCTCCTC 59 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582,FBtr0112583 1 3 3 130 3R 23904347 23908636 GAGTAAAGAGAACATCAAGCCG 59 23908727 23908745 TCTTCTGGAGGACCTCCTC 59 NA Drosophila melanogaster 61 CG5639 FBgn0039527 FBtr0085202 1 1 1 80 3R 23416022 23416040 CCAGGAGTTTCCAGATGGA 58 23415897 23415981 CGTTGTGGTCATTCTTAAATCC 58 NA Drosophila melanogaster 61 CG31068 FBgn0051068 FBtr0085118 1 1 1 81 3R 23061692 23061787 AACAAGTGAGGATAGCAACAC 58 23061830 23061848 TTCTCCTGCGACTTCTTCC 59 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 3 2 2 62 3R 22939931 22940011 AAAGACGCATTTACGACGA 57 22940035 22940055 CTATGAAGTCATCCAGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ald FBgn0000064 FBtr0114544 3 1 6 88 3R 22084764 22084785 TGACTTTGATTACATCAGAGGG 58 22083752 22084715 TCGAGTGTAGTTCTCGACG 59 NA InUTR Drosophila melanogaster 61 CG12290 FBgn0039419 FBtr0084990 3 1 1 60 3R 22056881 22056899 CCTTTGAGAGCTTACCCAC 57 22056922 22056941 GACCAACATCTCAGTTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31087 FBgn0051087 FBtr0084855 2 1 1 106 3R 21137433 21137453 GGGCCAATAATGTGATGTACC 59 21137277 21137365 GTACAGATCATTGGCCGGA 59 NA Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 3 1 1 70 3R 21088554 21088572 AGAGTGGAAAGGATGCAGG 59 21088606 21088683 CTTCTCCTTACCGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13634 FBgn0039224 FBtr0084742 2 1 1 203 3R 20615465 20615484 ATTGGCTGTACTTTCTGCTG 58 20615229 20615249 AACTGTGGTACAACTGGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5728 FBgn0039182 FBtr0084632 1 1 1 101 3R 20154806 20154880 CCAAATCAAGAGCACATCCC 59 20154724 20154744 AGTGACTACATCATCGAGCAG 59 NA Drosophila melanogaster 61 CG13609 FBgn0039170 FBtr0084560 3 1 1 60 3R 20052972 20052993 AAGGAAACAATTTGGAGTGGAG 59 20053012 20053032 TCGGTTGATCCAATATCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg6 FBgn0010709 FBtr0084590 1 1 1 98 3R 19876176 19876252 GTTATCTTTGCCCATCTACGG 58 19876098 19876116 GAGTCCGTAAGCCTGTAGG 59 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 3 3 3 84 3R 19349551 19349633 CTGTTCATAAGAAGACTTCGCA 58 19349488 19349506 TCAAATCTTGCGGAACCAG 58 NA Drosophila melanogaster 61 CG31343 FBgn0051343 FBtr0084126 2 1 1 103 3R 17574248 17574269 CATATGCCAACCTTTCAGACTC 59 17574333 17574421 CAAAGCGTTAAGCCTCGTC 59 NA Drosophila melanogaster 61 Rab11 FBgn0015790 FBtr0084010,FBtr0084011 2 2 2 80 3R 16940757 16940776 AGTTTCATAGAAACCTCGGC 58 16940817 16940986 AATGCGATAGATCTCTGTGAG 57 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089520,FBtr0089518 3 2 4 121 3R 16894631 16894649 AAGGACAAGACGCTGATCC 59 16894734 16896456 GAGAGGTCGTCCTTGATCC 59 NA Drosophila melanogaster 61 Indy-2 FBgn0260466 FBtr0091938,FBtr0091937 2 2 2 60 3R 15870476 15870708 TTATTTCTGCTGGGTGGTG 57 15870732 15870750 TGTTCAAACCAGTTTCCCT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 1 2 2 83 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216845 14216863 GAGAATCCTGTGGGCAGAG 59 NA Drosophila melanogaster 61 CG12241 FBgn0038304 FBtr0083051 2 1 1 110 3R 11045774 11045859 CCACGATATAGTTAAAGCTTCTAGC 59 11045926 11045945 CCATTCGGATTGCTAAAGCA 59 NA Drosophila melanogaster 61 spn-B FBgn0003480 FBtr0082933 3 1 1 82 3R 10154605 10154676 CATTGAGGCAGAACCTCTC 57 10154722 10154740 TAATGATCAGGCCAATGCC 58 NA Drosophila melanogaster 61 Osi22 FBgn0038133 FBtr0082738 2 1 1 118 3R 9117099 9117178 ATAGTGAAGAAGGTCGCGG 59 9117260 9117278 CAGTTTCAGCTTGGTGACC 59 NA Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 2 3 3 92 3R 8825929 8826123 ATGCTGACATACATTCTGGAC 58 8826176 8826195 CAGGAAATCGTTCTCAAACG 57 NA Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 1 2 2 106 3R 8497390 8497408 TTTCTCAACACCGGAGGAC 59 8497478 8497600 TCAACCAGACCAAACCCTC 59 NA Drosophila melanogaster 61 CG5961 FBgn0038056 FBtr0082681 3 1 1 98 3R 8284853 8284935 CTAGCTTGTGTCAAAGTATGGG 59 8284776 8284794 GATGAACATGTCTCGCCAG 58 NA Drosophila melanogaster 61 CG4674 FBgn0037856 FBtr0082325 2 1 1 91 3R 6720764 6720782 CTATAGCCAACTGCCATCC 57 6720837 6720912 CTTCGTATGAAGGTGGCAG 58 NA Drosophila melanogaster 61 P58IPK FBgn0037718 FBtr0082074 2 1 1 126 3R 5413100 5413118 AGTGACCTGCTCATGATCG 59 5413269 5413289 CCAGATGGTTCTCAATATCCG 58 NA DesignNoJunction Drosophila melanogaster 61 RagA FBgn0037647 FBtr0082013 2 1 1 80 3R 4809261 4809344 CATTATACAAAGCCTGGTCTTCC 59 4809203 4809224 CGAAATGTGTCACAGAGTTCTC 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301878 3 2 4 131 3R 4608103 4608178 CTACTCGATCTCGAGGGTC 58 4607990 4608008 TTTGCTTTGGAGACTCACC 58 NA Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0300896 1 1 2 109 3R 4047487 4047505 GAAGGTTTCGCCATTGGAG 59 4047578 4047656 TTCACTGGAGCTTTGTTCG 58 NA Drosophila melanogaster 61 alpha-Est6 FBgn0015574 FBtr0081549 2 1 1 62 3R 3350910 3350932 GGTATCACCAAGAGTAACATCAC 59 3350778 3350799 GTGCCAGAATAACTTGTAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Fer1 FBgn0037475 FBtr0081567 3 1 1 217 3R 2963298 2963579 GACTAAGCAAGGTGGACAC 58 2967255 2967273 CTTACTGCCCGGATATCGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081637,FBtr0081636,FBtr0081635 2 3 3 60 3R 2902725 2902744 ACCAATATCTTCTCGGAGCC 59 2902767 2902785 GTTGGTTGTACTTGGCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081637,FBtr0081636,FBtr0081635 1 3 3 60 3R 2902726 2902744 CCAATATCTTCTCGGAGCC 57 2902768 2902786 TGTTGGTTGTACTTGGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Osi20 FBgn0037430 FBtr0081708 1 1 1 127 3R 2166285 2166303 TTTGATCTGGAGTTGCCCA 59 2166460 2166478 ATCAGAGCCAGCAAGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1208 FBgn0037386 FBtr0113197,FBtr0113196 1 2 2 88 3R 1661658 1661742 CGGCTATGATAATTTGTTTGGG 58 1661791 1661809 GTTTCCGGCAGATATCTGC 58 NA Drosophila melanogaster 61 CG2931 FBgn0037342 FBtr0078753 3 1 1 61 3R 1393519 1393537 GCAAGAGCAAGGGATTTGG 59 1393476 1393494 CATGGCCCGTATAAAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 2 2 2 105 3R 1063869 1063944 ATTTCGATCGGCATCAATGC 59 1063783 1063801 CTAGAACACCGTGGTCGAG 59 NA Drosophila melanogaster 61 CG14658 FBgn0037283 FBtr0078874 3 1 1 62 3R 655853 655871 AACAGATAACGGCCTTCGA 59 655809 655827 CCAATAGCTTGCGGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dip2 FBgn0040466 FBtr0078893 1 1 1 84 3R 470787 470910 TACTACAATTGACGCAGTCC 57 470722 470740 CACAGCTTCCTTTAGAGCA 57 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG9279 FBgn0036882 FBtr0074976 1 1 1 80 3L 19535270 19535407 GCTTCCAAAGAATCCAGTGAC 59 19535210 19535230 GGAGACAAGGTTACTTCTCCA 59 NA Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586 3 1 4 81 3L 19178806 19192581 TTTACATCTGATCCAGCCTG 57 19153762 19153780 TCTGGTTCATTCGATTCCG 57 NA InUTR Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0075224 2 1 2 164 3L 17474064 17474600 CTAACCAAGACAGCAATAGGTG 59 17473921 17473939 CAAACCAGGCAATCCATCG 59 NA InUTR Drosophila melanogaster 61 CG6876 FBgn0036487 FBtr0075642 1 1 1 195 3L 15153550 15153627 TCGGAGACATCGAAGAGGA 59 15153786 15153804 GAGATTTGGCGTTTGACCG 59 NA Drosophila melanogaster 61 nan FBgn0036414 FBtr0089524 3 1 1 86 3L 14181472 14181490 CAACGGAAACACCGTTCTC 59 14181346 14181424 TGTATGTTTGTTCCAACCTCG 58 NA Drosophila melanogaster 61 endos FBgn0061515 FBtr0075783,FBtr0075782 1 2 2 113 3L 14023963 14023981 AAGTCCAAGTATCCCAGCG 59 14023482 14023500 CTTGGCCATCTGGTAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11253 FBgn0036338 FBtr0075894 3 1 1 100 3L 13018103 13018122 GAGATACGGACCATACTTGC 58 13017965 13018040 CTTGAGCTGACAATCACGG 58 NA Drosophila melanogaster 61 CG10749 FBgn0036328 FBtr0075871 3 1 1 60 3L 12966061 12966080 CCCATCAACGTGATAGTACC 57 12966102 12966121 GATCGTATGTACCCTTTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6053 FBgn0036195 FBtr0301326 3 1 1 81 3L 11690657 11690736 CTACTAACAGCCATGTTCGAG 58 11690596 11690615 TGACTTTCAGCTTGCTTTCC 59 NA Drosophila melanogaster 61 wls FBgn0036141 FBtr0076219 2 1 2 83 3L 11161285 11161306 TTTAGGAATATTGGCGACAAGC 59 11160695 11161247 GCGATAGATAAGACCTTCATAATGG 59 NA Drosophila melanogaster 61 aay FBgn0023129 FBtr0076457 3 1 1 60 3L 9416979 9417000 AATTCGCTTGAACATCATACGG 59 9417021 9417039 TCGCTCCTGGATGAAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dhpr FBgn0035964 FBtr0100531,FBtr0100532,FBtr0076531 3 3 3 80 3L 9127919 9127938 CGAGTGGTTATTTACGGTGG 58 9127980 9128095 GCCAACCCAATAATTGTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG7081 FBgn0035876 FBtr0076602 1 1 1 86 3L 8332279 8332366 CGTGTAAATCAGATAGATGCCA 58 8332413 8332431 GATGGCTTGCAAGTTCTCC 59 NA Drosophila melanogaster 61 CG42590 FBgn0260967 FBtr0301744 3 1 1 60 3L 8062219 8062239 GCTTACACAGGAAATTCTCCA 58 8062179 8062199 CAAGAAATACGGCTTCTTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8543 FBgn0035787 FBtr0076863 3 1 1 60 3L 7463017 7463036 GATCACCAAGTCCTTCTACG 57 7462976 7462994 AGAGTACACGGTCTTAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12027 FBgn0035585 FBtr0073372 1 1 1 80 3L 5011851 5011870 GTGGATATGCTCGAGTTTCC 58 5011735 5011811 GTTCTCTGGTAGATCATCAACC 58 NA Drosophila melanogaster 61 dyl FBgn0066365 FBtr0073343 1 1 3 80 3L 4299082 4299352 CTGTTAAACCGCGTGTACTC 59 4299021 4299042 TTAAGCGGCCAAATTAATAGCC 59 NA InUTR Drosophila melanogaster 61 CG1273 FBgn0035522 FBtr0073231 1 1 1 90 3L 4274015 4274035 GCATTTATCGTCCTGCTTACG 59 4274087 4274168 CCATGACAGGATCCTCCAG 59 NA Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073209,FBtr0073210 3 2 2 60 3L 4105445 4105465 AACATCACCAGGATACCAGAG 59 4105487 4105505 TGAACCTTTGAGGCTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073064 2 1 2 135 3L 3320344 3320523 CTTCACTTTATACGCAATCCCA 59 3320619 3320637 CTCTCAGGCTCCAGATGTG 60 NA InUTR Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 1 7 7 80 3L 2640447 2640465 GGTCACAAGTTCCATGCAG 59 2640507 2640588 CATTGGTACATCCTTCCACAG 58 NA Nonspecific Drosophila melanogaster 61 CG13931 FBgn0035258 FBtr0072802 2 1 1 168 3L 1701893 1702301 TGTCCAAACTGTCATCTGGT 59 1701744 1701762 ACCTTGTACACGGTGTGAG 59 NA Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597,FBtr0072598 1 2 2 122 3L 827970 827989 GTATCTGTCCATTGAGGCAG 58 827688 827885 TTGCTGGCATCTTAGAAGG 57 NA InUTR Drosophila melanogaster 61 CG13900 FBgn0035162 FBtr0072597 1 1 2 90 3L 831226 831323 GGCAACCACTATCTATATCAAATCG 59 831160 831178 TTTCACCCTCCTCCAAAGG 59 NA Drosophila melanogaster 61 CG32344 FBgn0052344 FBtr0072576 3 1 1 81 3L 324100 324118 GTAATTGTTGCAACGCCAG 58 323983 324055 ACACCACGTACTCTATGGA 57 NA Drosophila melanogaster 61 Lsp1gamma FBgn0002564 FBtr0072463 1 1 1 80 3L 66657 66677 CTCTAATGTTCGAGGAATGGA 57 66718 66802 TGTAGAAATCGAAGGTCTCG 57 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413,FBtr0300956 2 2 6 81 2R 20817347 20817365 GTGATACCTGTGGACATCG 57 20817231 20817303 TCTGAAGAGGTCTCTTCTCC 57 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 2 5 5 81 2R 20770530 20770606 CTTCCTGCAAGTGATAACGA 58 20770649 20770668 AAAGTTCACTAGGATAGGCG 57 NA Drosophila melanogaster 61 CG4612 FBgn0035016 FBtr0072346 2 1 1 102 2R 20412366 20412390 CAAGAATCTGTATGTGAAGAACCTC 59 20412057 20412306 CAGCATGAGCTTGTGACTG 59 NA Drosophila melanogaster 61 CG9304 FBgn0034674 FBtr0071726 1 1 1 80 2R 17862188 17862210 GGATAATTCTGATGTCCATCTGG 58 17862249 17862321 CATCGACTTCCGTCCTATCC 59 NA Drosophila melanogaster 61 CG30263 FBgn0050263 FBtr0273308 3 1 1 81 2R 17565289 17565309 CTGAACATAGCTTAAAGCGGG 59 17565350 17565438 TGCTCCACTCTATAATCTCCG 58 NA Drosophila melanogaster 61 LSm1 FBgn0261067 FBtr0071628 3 1 1 122 2R 17057739 17057819 TACTGGGCGAAATAGACCG 59 17057635 17057654 ATACTAGGCGGTGTTTCTCC 59 NA Drosophila melanogaster 61 IM4 FBgn0040653 FBtr0071559 2 1 1 115 2R 16756720 16756738 CTTCTCTTGGCCATGTTCG 58 16756564 16756586 GTTCTCTAATCCTAACCAGTACG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18065 FBgn0034519 FBtr0100677 1 1 1 80 2R 16439322 16439410 GCAAATAATTTGGGTTCTGTGG 58 16439204 16439222 GTTCTTCAGGGTTTGGTGC 59 NA Nonspecific Drosophila melanogaster 61 CG12699 FBgn0046294 FBtr0300762 1 1 1 199 2R 13134730 13134836 TTTCACCTCCAACAGTCCA 58 13134549 13134567 ATCTCACGGAACTTGACCC 59 NA InUTR Drosophila melanogaster 61 CG18469 FBgn0034206 FBtr0086996 2 1 1 62 2R 13133440 13133463 GTCTACAGATACAGATGTGAATCG 59 13133401 13133422 CGGACTAACCGATCATTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tef FBgn0086350 FBtr0087014 2 1 1 60 2R 12943802 12943886 GACAATAGCCCAATGAAACCT 58 12943762 12943782 CCGCTAGCAGGTTTATTTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12868 FBgn0033945 FBtr0301735 3 1 1 110 2R 10492605 10492686 CTGATAAGAACACGGAAGGAG 58 10492515 10492534 TGTAGGGATTGAGTTTGGGT 58 NA Drosophila melanogaster 61 Obp50a FBgn0050067 FBtr0087558 3 1 2 203 2R 10258466 10258484 ATAATTCCCTTTCGGGCTG 57 10258223 10258243 ATCTAAACGGCACTTGATGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30060 FBgn0050060 FBtr0087714 2 1 1 60 2R 9310987 9311007 GGTGATCAGTGTGCTATATCC 58 9310947 9310966 AATCACTACCATAATGCCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 2 4 4 80 2R 9074417 9074493 TCAGTAAGATCACGCAGGA 58 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 CG8525 FBgn0033735 FBtr0087927 1 1 1 145 2R 8313253 8313324 AAACCCTGCCCTATGATCC 59 8313433 8313451 ATCTGTCAGCATCAGAGCC 59 NA Drosophila melanogaster 61 CG13189 FBgn0033665 FBtr0088038 2 1 1 60 2R 7787685 7787703 CGGAGTATACGCCTTTCTG 57 7787726 7787745 GTAGACGAAGATCGATCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13223 FBgn0033599 FBtr0088113 3 1 1 81 2R 7145167 7145246 CATAGCCTACATAATAGTTCGAGGA 59 7145282 7145303 CACAGGAATCATTAGGATCAGC 59 NA Drosophila melanogaster 61 CG34221 FBgn0085250 FBtr0299834 1 1 1 81 2R 6085573 6085886 CAAGCTGAAGATCCGAATACAC 59 6085513 6085533 CAGCGGAACCTTCTTAATGAC 59 NA Drosophila melanogaster 61 CG8232 FBgn0033352 FBtr0088654 1 1 1 80 2R 4819722 4819804 GTATACGAGGACAAGGCCC 59 4819848 4819866 GGTAGTCCACGACCTTCTC 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 3 4 4 120 2R 4642429 4644854 CGAACCAAAGACTATCGATATCTC 59 4644933 4644951 CTCCTTCGGCTTCAAATGC 59 NA Drosophila melanogaster 61 debcl FBgn0029131 FBtr0086108 2 1 1 143 2R 2537064 2539495 AAATGGATATCATCAACCAGGG 58 2539599 2539617 CTTCATAGACCACGTGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG11665 FBgn0033028 FBtr0086072 1 1 1 97 2R 1531218 1531334 TATAGTTCATTGGGCCCGG 59 1531139 1531157 ATCATACCCAGTGACGCAG 59 NA Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113 3 1 2 177 2R 482956 486380 CAGCCTAATCGGATTCTGC 58 486520 486539 TTATACGCATACACGGACAG 57 NA InUTR Drosophila melanogaster 61 snoRNA:Psi18S-525h FBgn0083031 FBtr0113551 1 1 1 60 2L 20421341 20421361 GAATTGTGTCTCAAATGCTCC 57 20421382 20421401 TTGATTATTCAGGATGCCGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-C437 FBgn0086032 FBtr0114308 1 1 1 60 2L 4085943 4085961 TAGGGAAAGAAACTCCGCC 59 4085985 4086003 GTTCAGTTGTCGCTGAACG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42546 FBgn0260719 FBtr0301172 1 1 1 60 2L 21590417 21590435 CCAATTTCGAGACCAGCAC 59 21590324 21590394 AACCGCATATGTCAAATCGA 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 His4:CG33893 FBgn0053893 FBtr0091897 1 1 1 60 2L 21474143 21474161 CGTAATTCGTGATGCCGTG 59 21474101 21474120 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479,FBtr0081478 2 4 4 89 2L 21255234 21255252 GAACTTCGGTCAAGTCGGA 59 21255303 21255547 CCATGATTTCCTGCAGTAGTG 59 NA Drosophila melanogaster 61 CG9335 FBgn0032895 FBtr0081426 3 1 1 69 2L 20852811 20856155 CATCACAGCCATAAATGAGC 57 20856187 20856205 AATTGTGTCCGAGCTACAG 57 NA DesignRelaxed Drosophila melanogaster 61 Pomp FBgn0032884 FBtr0081414 3 1 1 172 2L 20787778 20787864 CGAATATGTATCAGCCATCACTG 59 20787996 20788014 CATGTTGCGGTTGTACTGG 59 NA InUTR Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 1 2 2 103 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054950 20054968 CGGAATTTCGTACTGCTGC 59 NA Drosophila melanogaster 61 CG13078 FBgn0032809 FBtr0081256 3 1 1 60 2L 19564381 19564400 TAGAATCGGCGCTATATGTG 57 19564423 19564441 CTGATCCAAATGGTGACGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ntf-2r FBgn0032680 FBtr0081063 1 1 1 60 2L 18454876 18454895 CTACCGACTCTTTCATGACC 57 18454918 18454936 TCCAGAATCTTGGGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17912 FBgn0032600 FBtr0080893,FBtr0113041 1 2 2 174 2L 16744378 16744700 GCGTACAGTAATGCTACCA 57 16744836 16744856 GTGGATGCATAATCTTTGTGG 57 NA Drosophila melanogaster 61 CG31823 FBgn0051823 FBtr0080810 1 1 1 181 2L 15899211 15899308 CCAGCGAATCAAATAGTTACC 57 15899050 15899068 ATCCCTTCAATCCGAATGG 57 NA Drosophila melanogaster 61 CG7953 FBgn0028533 FBtr0080550 2 1 1 83 2L 13848092 13848255 AGGAGGGAGTTGAAGTTGC 59 13848302 13848320 ACTCCATCTGCTTCTGGAG 58 NA Nonspecific Drosophila melanogaster 61 CG7110 FBgn0032521 FBtr0080500 2 1 1 80 2L 13403340 13403479 CTTTCTCAAGCACCAGATGC 59 13403520 13403540 GTTGGTTGTGTTGTCTTCCTC 59 NA Drosophila melanogaster 61 CG12264 FBgn0032393 FBtr0080290 2 1 1 202 2L 11999846 11999922 CATCCAAAGAATTCCGGGA 57 12000088 12000106 TACAGCGGACTCTGTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 3 2 2 80 2L 10999569 10999589 CCAGGCCATAATGATCATTCC 59 10999442 10999528 CTCAACGTCCTAAAGTCAGC 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089735,FBtr0089737,FBtr0089736 1 4 4 145 2L 10264211 10264232 GCTGATATGGAGATACAGAGCA 59 10264625 10264773 CTGCTGCGTTCTAGTTTGG 59 NA Drosophila melanogaster 61 zf30C FBgn0022720 FBtr0079865 3 1 1 101 2L 9761492 9761576 ACCGCTGGTATTCTCAAGAC 59 9761640 9761658 CTTGTATTGCGCCTTCACC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7149 FBgn0031948 FBtr0079496 1 1 1 80 2L 7788081 7788159 ACAACTTGGATGGCATGGA 59 7788019 7788040 ATCCATGATCGAATAGCTCTCC 59 NA Drosophila melanogaster 61 snRNP70K FBgn0016978 FBtr0079355 3 1 1 198 2L 6971503 6971600 TGGCTGTTTAAGACGAGGA 58 6971323 6971341 AAATCGGCCATGAACTTGG 58 NA InUTR Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 2 5 5 82 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791313 6791526 TACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 TTLL3A FBgn0031854 FBtr0079305 1 1 1 91 2L 6737644 6737662 ACTCCAGTCCGGATCTAGG 59 6737520 6737591 GCGATCGATAACAACCTTGAC 59 NA Drosophila melanogaster 61 CG11327 FBgn0031849 FBtr0079315 1 1 2 80 2L 6686490 6686573 ATTTATAAAGGCCACGATGGC 59 6686430 6686448 TTGTTGTTCTCAGTCCGCT 59 NA InUTR Drosophila melanogaster 61 CG11329 FBgn0031848 FBtr0079319 2 1 1 60 2L 6677061 6677081 CGACAGAATCTACCTAGGTCC 59 6677021 6677042 GTTCGAGCTCAAATAGAAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cup FBgn0000392 FBtr0290322 1 1 1 92 2L 6665777 6668346 CAAACGGAGTTCCAAGATCC 59 6668401 6668419 GTCTTCGTCGTTGTAACCC 58 NA Drosophila melanogaster 61 Sfp26Ad FBgn0261055 FBtr0301935 2 1 1 68 2L 5943219 5943243 CAAGTGGTTAGCTATTCTACAACTC 59 5943105 5943124 ATTTCATCAACTTCGGCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14007 FBgn0031731 FBtr0113023 2 1 1 80 2L 5716267 5716288 GCATTTGTCCACGTAATATCCT 59 5716148 5716229 CCATTTCCGTAACTTAATGGCA 59 NA Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 3 2 2 60 2L 3463739 3463757 AATCCCAGCATCCTTTGGT 59 3463645 3463717 ATATTGAAGCCCTGGTACTCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0273230,FBtr0077645,FBtr0077644 3 3 3 82 2L 2996426 2996512 GTAAGCTTAGGTCCCTTTCTC 57 2996555 2996574 AAGTGGAGATTGACGTACAG 57 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0077678 3 1 2 138 2L 2971048 2971128 AAAGTAAACCAGCTCGAGG 57 2970847 2970868 GCGTCTTTATCCAATGTTACAG 57 NA Drosophila melanogaster 61 CG42296 FBgn0259192 FBtr0299676 2 1 1 60 2L 2034555 2034573 CTCTGTGATGTTTGCCCTG 58 2034513 2034532 TACATACGAACCCTGTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31935 FBgn0051935 FBtr0077916 1 1 1 80 2L 1595640 1595661 AATGCACGAGATCTACAATCTG 58 1595527 1595601 GCATTGCTTAGAATGTCAGCT 59 NA Drosophila melanogaster 61 CG4644 FBgn0031300 FBtr0077989 3 1 1 82 2L 1107216 1107234 GACAAGAGCAAACGTTCAG 57 1107098 1107172 GACTTGAAACGTTTCTTCGAC 58 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 3 4 4 80 2L 872015 872035 ATCGCCTCAAGATAAACTCAG 58 872076 872222 CTAGAATGCGTACACCTTCG 58 NA Drosophila melanogaster 61 CG3876 FBgn0031284 FBtr0078039 1 1 1 80 2L 818754 818772 TGAATGTGATCGCCTTTGG 58 818632 818711 AGAAAGTATAGACTCCCGCC 58 NA Drosophila melanogaster 61 al FBgn0000061 FBtr0078053 2 1 1 139 2L 384811 384829 CTATCGCACAACCTTCACC 58 385738 386317 GAAACCAAACCTGAATGCG 57 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050,FBtr0078049 3 5 5 80 2L 336190 336354 CTCTTTGACAGCATCGTTGG 59 336395 336415 CTGTGTCTTGTTCAGGAACTC 58 NA Drosophila melanogaster 61 CG3709 FBgn0031227 FBtr0078147 2 1 1 87 2L 155140 155163 GCGGAGTATAGAAACATCAATGAG 59 155008 155028 CGGATATAACAAGCTCTTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 3 5 5 110 2L 155731 155750 ATCTCCGACTTTCAGGAGTG 59 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 1 4 5 96 2L 344409 344427 GAAATCCAGTCCGCTAGAG 57 344484 344570 CGGAGAAAGACAATTAAGACTC 57 NA Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0301439,FBtr0078001 2 2 3 91 2L 756067 756676 GCTATAGTGGACTGAACAATCAC 59 756727 756745 ATAACCGGAGCCAAATCCA 59 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0112936 2 1 2 165 2L 943492 950503 GAGTCTTCACATGGACTTCAC 58 951638 951656 GAAGTCGTTCGAGAAGCTC 58 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0077970 1 2 3 80 2L 1179515 1179867 AGTTAACCCAGGGAGTCCT 59 1179911 1179929 AAGTCCAGTCTGAGATGCG 59 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077926 3 1 2 99 2L 1368391 1368409 CGGACACCGAGATTTACCT 59 1368472 1368540 GTTGGATCCGGATTGAACC 58 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077927 3 1 2 99 2L 1368472 1368576 GGTTCAATCCGTACGAACC 58 1368638 1368657 ATGTCCTTGTCGCTGTAGAG 59 NA Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 1 2 2 124 2L 2158564 2158582 TCAAGCTGGAGAATGGCTC 59 2158396 2158478 GCGAATGAGTGGATAACAGTC 59 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 1 4 4 87 2L 2224614 2224633 AATCTACCATCCAGACGGAG 58 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 2 2 4 80 2L 2490668 2490740 AGCGACATAATCTTCCGGT 58 2490606 2490625 AAAGGTAGTCATCCGTCTCC 59 NA Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 3 2 2 99 2L 2753623 2753642 CAAAGGAATCCGTGAAAGGC 59 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0077621,FBtr0077623 1 2 3 200 2L 2856383 2856401 GTCCAACAGGATCATCCAC 57 2856564 2856645 CACGCTTAGAAGTTCTTGGT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 3 2 2 167 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466927 3466946 TTGACAATCTCGTTGTCGAC 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 1 4 11 179 2L 3626210 3634250 ATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 Shaw FBgn0003386 FBtr0289989,FBtr0089274,FBtr0089275 3 3 3 92 2L 3722559 3722659 CTTTGAAATATTGGTGCGCT 57 3722713 3722732 CTAAGCGTCGCTATGTAGTC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 3 5 6 92 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307621 4307640 TGATGTAGCACTGAACAACG 58 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 3 2 2 81 2L 4399591 4399669 AGGAGAACAAGGTTAACGC 57 4399714 4399732 TAGAAGGGCGAATTCATGC 58 NA Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 3 1 3 79 2L 4880294 4880313 ACATTTAACGACTCACACGG 58 4879137 4879155 TCAGATAGTCCTTCACGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 2 2 2 66 2L 4954370 4954388 GGATTCACCCGTGTTACCA 59 4954322 4954341 CTTAGTAGTAAGCAACGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8885 FBgn0031656 FBtr0079052 2 1 1 87 2L 4968460 4968479 TTTGTCCCGATGAGCTAGAG 59 4968329 4968347 ATAAAGATGGGCTGCACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 110 2L 4994864 4994882 CTTGTCGCTCCTAACCCTC 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 Cg25C FBgn0000299 FBtr0079002,FBtr0079001,FBtr0079003 1 3 3 103 2L 5034887 5034905 AGACATTGGTCCAAGAGGC 59 5034971 5035072 CAATAAGACCTTGACGTCCG 58 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 1 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0111024 1 1 2 145 2L 5074518 5075656 TTATCCAGGAGCTCGAAAGG 59 5074392 5074412 CGCCCAGATAGTAGTAATCCA 58 NA Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026 2 1 2 80 2L 5077585 5077605 TCTATGAGATTGGCTCCTACG 58 5077248 5077543 ACTGCCAAATACGGAACGA 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079198,FBtr0079197 2 2 3 81 2L 6110156 6110174 GATTAGTACGCGACTCGGT 59 6110219 6113042 GATCTTCTTGACACCGCTG 58 NA Drosophila melanogaster 61 Liprin-alpha FBgn0046704 FBtr0079301,FBtr0079300 3 2 2 80 2L 6725249 6725785 ATAATACCAGGCTTCTCCTCG 59 6725827 6725845 GCTTCACAACGGTCATACG 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 3 5 5 82 2L 6791572 6791590 TTGATCTGGTACAAGGGCA 58 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299537 1 1 3 139 2L 7234990 7237697 TGATTTCGAGGTGACTCCG 59 7234869 7234887 CCTTCCACTCGATCTCGTC 59 NA Drosophila melanogaster 61 CG8552 FBgn0031990 FBtr0079641 3 1 2 89 2L 8140773 8159231 ATCTTGAATCGCGAACCGA 59 8140702 8140723 ATTCAAGTTAATCTCGTCGAGC 59 NA Drosophila melanogaster 61 CG8486 FBgn0031993 FBtr0300331,FBtr0300334,FBtr0300332 2 3 4 169 2L 8183486 8183504 ACCATAAGACTGAACCGCT 58 8183702 8184141 GGTTCACTTTCATCGCTCTC 59 NA Drosophila melanogaster 61 CG8360 FBgn0032001 FBtr0089935 2 1 2 92 2L 8213268 8213340 AATTCCAGAGCCTGGATCC 59 8213396 8213414 CGGCAAAGTTACTGTACGG 59 NA Drosophila melanogaster 61 GlcAT-S FBgn0032135 FBtr0302199 1 1 3 80 2L 9617775 9617795 AGATAGAAGAGCAAACGACCA 59 9617831 9621159 GGAAATTCATACTATGGATTCTGGG 59 NA Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079931 1 1 2 116 2L 10009529 10010747 GCAAGGATGAATACACCGA 57 10010825 10010845 TCAGGAATTTGGTCTTCTTCG 58 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080075 2 1 3 83 2L 10278585 10278658 AACTGGATAGTCGATACTACGG 59 10278523 10278541 TGATGGTCTGCTGAACGAG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 2 5 6 100 2L 10399597 10399615 AATGCATCAGGGAAAGCAC 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031 2 1 2 97 2L 10459265 10459665 TAATGTTAAAGAGCGCGTGG 59 10459725 10459743 AATCCTCACCCATGGTCAG 59 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 3 3 3 168 2L 10976155 10976262 GACTTGTGAACAGGCTCCT 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091681,FBtr0091680 3 2 5 172 2L 11278478 11278765 CCATCGGGTTCTCAGATCC 59 11278898 11278919 GGCTGTGACTTGAATACTTGAG 59 NA Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0301171 3 1 3 105 2L 11987772 11987790 CAAGAAGCACAAGGAGCAC 59 11987484 11987703 CAGCGGGATACTATCCGAG 59 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 1 1 2 80 2L 12673635 12680782 CCTGCCAACAAAGTTATGC 57 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080392 2 1 2 81 2L 12673634 12680782 TCCTGCCAACAAAGTTATGC 59 12680826 12684541 CTTTCCGCAGTCTGATAGC 58 NA Drosophila melanogaster 61 p38b FBgn0024846 FBtr0080534 3 1 1 230 2L 13780700 13780718 AGCGTTGTTGTCCAATCAG 58 13781014 13781032 CAGCTTGTAGAATTTGGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 2 5 5 160 2L 14977341 14977360 TATGAAGGCTTTGACAGGTG 57 14977069 14977218 TAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 1 5 5 80 2L 14984074 14984206 AGTCATATTAATCACTCGCCTG 58 14984015 14984034 CGTGAGAAGGCTTTGTATGG 59 NA Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 2 1 1 85 2L 15616154 15616172 CTATAGATGGCCCAATCGC 57 15616034 15616052 GAATAGCGCTCACGATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112943 2 1 3 129 2L 15650400 15650509 GAAGTGGATGTCGGTTCGA 59 15650289 15650307 CTTGCGAGATCCCTGAGAG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 2 4 5 160 2L 15737952 15740779 GCCAAGAGTGTTTGTTCTACC 59 15737812 15737831 TCTGGATGTGGAAGGATAGC 59 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 2 2 2 82 2L 16505875 16505896 TACGATACGAAATCCTATCGCA 59 16505937 16506016 AGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 Gr36d FBgn0046888 FBtr0080965 2 1 1 89 2L 17182554 17182573 TGCTATCTTGGATAGCTGCT 58 17183058 17183076 GAAGGAGGTTCTTTCGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 3 1 1 147 2L 17590790 17590808 ATGCTCTCGAGGAGTTGAG 58 17590979 17590997 TAACTGCTGCTAGTCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 2 4 4 104 2L 18827250 18827520 TAGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG31678 FBgn0051678 FBtr0290060,FBtr0290059 2 2 2 135 2L 20660381 20660462 GTTCTTCGATGTGGACACC 58 20660264 20660282 CAAATCCGGCGTATAGGTG 58 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 3 3 3 80 2L 22365256 22365277 AGTTATACTCGAGATTCCTCCC 58 22365314 22365388 GAATGGGACATCCTTTAGAAGTC 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0111119,FBtr0301454,FBtr0111118,FBtr0301455 2 5 5 80 2R 580449 580530 AATTAGAGGTTATGCGAGTCGT 59 580390 580412 GTAGTGCGAAGAAGTGTATACAG 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089753 3 1 6 138 2R 1009144 1009286 CATGTCTATGTATAAGGGTGGTC 58 1009028 1009046 AAGACGTTCAAACTCCCTC 57 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0300285 3 1 5 120 2R 2641001 2642219 TTCAACTGCAGTATCCAAGGT 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302035,FBtr0113470 2 3 6 94 2R 2814317 2816023 CACTTTGACGACTATGCCAC 59 2814242 2814260 TTCGCGTTGAGATTCTCGA 59 NA Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 3 1 1 88 2R 2837435 2837455 TATATTAGCAACTCCGACGAG 57 2837564 2837583 TTCAAGTCCAGTTCGTAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082 1 1 59 80 2R 3247225 3247243 GGTGAGGATTAGGCAGGAG 59 3236472 3247183 TTGTACCATCTATACACCGGC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111103 2 1 59 97 2R 3236477 3242206 CGGTACCATTCTTCAGATGG 58 3236399 3236417 GAGAGTACCAGAGACCTGC 58 NA Drosophila melanogaster 61 kappaB-Ras FBgn0040513 FBtr0299801,FBtr0089002 3 2 2 153 2R 3333017 3333099 CAATCCCGAAACGGAACTG 59 3332882 3332900 AAACTGAAGGTAGTGGCGT 59 NA Nonspecific Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0088952 1 2 3 147 2R 3472856 3474448 AGACCGAAATCGCAAACTG 58 3472727 3472745 CCGAACGCTTGATTTCTCG 59 NA InUTR Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 1 3 3 80 2R 3490154 3490638 TTGGATAAAGTGGGTCTTCG 57 3490093 3490111 CGAGAAGACCTTGATCCAG 57 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940 2 1 5 87 2R 3569106 3569124 CTTATAAGGCGTGTCCGGA 59 3568967 3569059 TCGATCTCATTCTTAGGAGACTG 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 3 2 5 92 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575720 3575738 TTATCGCCTTTCGTCTCCA 58 NA Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 3 2 2 81 2R 3942532 3943248 CCTATCAAACAGGAGCCCA 59 3942469 3942487 GTTCTGTATCGCTGCTTGG 59 NA Drosophila melanogaster 61 coil FBgn0033265 FBtr0100668,FBtr0100667 3 2 2 81 2R 4014618 4014636 TTTCATCGATGCAGCATGG 59 4014500 4014576 CAGACTAATGTCCTTCAAGCTG 59 NA InUTR Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 1 4 9 148 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 3 2 3 113 2R 4607432 4607450 TACACCGTGGATCTGAGTG 58 4607279 4607355 ATCGAAGTTCTGGTAACGC 58 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 1 4 5 94 2R 4788974 4788992 TTAGCCCGTAGAGTTCGAG 58 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 2 3 3 92 2R 4799447 4799529 AGAAGAATGCTCCTGTTATCC 57 4799375 4799393 ACTGATCGTAGGGAAGGAG 57 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0300599 2 1 3 93 2R 4844577 4844596 AAGTTAAATTCGGAAGCGGG 59 4844650 4846620 GCACATAATCTGGTAGGACAC 58 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0300599 3 1 3 93 2R 4844578 4844596 AGTTAAATTCGGAAGCGGG 58 4844652 4846621 GGCACATAATCTGGTAGGAC 57 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 2 2 12 182 2R 5006308 5006327 CACATCAACGTCAAACAGTG 58 5006543 5009250 TCATTATCCTCGGATTGCTG 57 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299845,FBtr0299847,FBtr0301766 2 3 5 94 2R 5362692 5363607 AAATGGACTTTGCCCTTTGG 59 5363664 5363739 GGCTTCGTTCTTGATTCGT 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0112674,FBtr0302122,FBtr0112672 3 3 4 97 2R 5457655 5457730 CATCACGTAAGGTCATGCG 59 5457576 5457594 TTCTGTTGCGTGTACAGTG 58 NA Drosophila melanogaster 61 Not1 FBgn0085436 FBtr0302122 2 1 4 133 2R 5456173 5456192 GAACGATTGATCGTGAACCG 59 5455872 5456081 CCGAAATATTTGGTGATCTCTGG 59 NA Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 3 1 1 130 2R 5704951 5704969 AAGTGCTTCTATGTGGGCA 59 5705194 5705212 GACGTCACGTAGTGTACCA 59 NA DesignNoJunction Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088443,FBtr0088447 3 2 5 102 2R 5805513 5805531 TCTTAGCGTACTGAGCCAC 59 5805023 5805448 ATACTTATCGTGCCCTGGAG 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905 1 1 4 85 2R 5877820 5877838 TACGAGGGACTTTATGCGG 59 5877886 5877986 CCAGATCTTCACGCTTATCG 58 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112902 1 1 5 80 2R 5885053 5885223 TCGTCAAGCTAGCATTCCT 58 5884991 5885009 TAATGCTACGCTGAATGCC 58 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0088435 2 2 3 80 2R 5919132 5919152 TTGTCTACTGCCTGTATGTGG 59 5918912 5919090 CATTTAGCTGTCCTGCACC 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 3 12 12 100 2R 6499951 6500255 GGCATATGGACATGTATAACTCG 59 6500313 6500333 ATCCAAATTCGTATAGTGCGG 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088276 3 1 12 133 2R 6500312 6500331 ACCGCACTATACGAATTTGG 58 6500426 6500499 TTAATGCATCTTTCTCGCCA 58 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 1 5 5 105 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 dgo FBgn0086898 FBtr0088250,FBtr0088249 2 2 2 80 2R 6706100 6706119 AATGGTCACAATCAGAGCTC 58 6705984 6706062 CGGAGTATCTCCATAATTATTCCG 58 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 1 2 4 80 2R 6731013 6735972 TCCATTGTACTCAAGGCGG 59 6730951 6730969 ACCCAAATCCTCGTCAGAG 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088101 3 1 4 90 2R 7062303 7077855 TCGAGGCAAATCTACTGTG 57 7095757 7095775 CTGTGACGTATTTGCAGTG 57 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 1 4 5 80 2R 7199287 7199308 CCTAATCACAGCCATTATCCTG 58 7199176 7199246 CAGTAGCGTCTGTATCCCA 58 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 2 2 2 72 2R 7869941 7869960 GGATGTACACAAGCGTAGTG 58 7869824 7869842 CAGGTAGTCAGCTATGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 2 3 3 101 2R 8822744 8822763 AATAGACAGTATCCGGGTGC 59 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 2 3 12 92 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305323 9306499 AACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 1 5 5 149 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087648,FBtr0087647 2 2 2 134 2R 9709042 9711297 GATGAGATCGAGAATCTCAAGC 58 9708866 9708949 AATTTGGCTCACATAGTCCTG 58 NA Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 2 3 3 138 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854369 9854387 AGTTTGAAGCTCACCTTGC 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 2 3 3 104 2R 10865420 10865744 CTCATTAAGGTTCGCCAGC 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 2 4 4 110 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026097 11026115 CTGGATTACATTGGCCTGG 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 1 5 7 80 2R 11555162 11555180 AGCTGATTCTACCCATTGC 57 11553477 11555118 GCAGATAGGCATCGAACTC 58 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 3 4 7 93 2R 11652754 11660561 AATAATGTGTACCGAGGTGC 58 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289 2 1 2 93 2R 11744058 11744136 GAGTAAGCCAGGCAATGTC 58 11744192 11744211 CTGGAGACGATCAAACACTG 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 1 4 4 80 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747611 11747704 TGCTCTAGATCTAGGCCCA 59 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0112832,FBtr0087303 2 2 5 80 2R 11773649 11773670 TAACTGACAATCAGATCCACAC 58 11773148 11773608 TGTTGTTTAGGCGTAGTCG 57 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0087294,FBtr0087295 1 2 5 111 2R 11825268 11825286 GTTCGTACCTGCGAAATGG 59 11824077 11825195 GGATGTATGCTTGGAGAAGTG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302790,FBtr0087271 1 2 13 101 2R 11856643 11856663 CGAAACTAGCTGTCTTGTGAC 59 11854017 11856583 TCACGTAGATGGTAGTACTCTC 58 NA Drosophila melanogaster 61 CG8315 FBgn0034058 FBtr0087267 3 1 1 60 2R 11879620 11879640 GACGGTTGAATACATCCTGAG 58 11879527 11879546 ATCAACGCACTTACCAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 2 3 3 87 2R 11977133 11977151 CTTGTCGCTGTTCCTTCTC 58 11976780 11977082 AATTACAGGGACCTGGGAG 58 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258 2 1 3 172 2R 11973120 11974448 TGAATCGCCAAAGGAAGGA 59 11972892 11972910 CCATGTAGTCGGTGGAGAC 59 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087088 3 3 4 81 2R 12415123 12415141 ATGTGATCAACTTGGAGCC 57 12415185 12416063 TTCTTGCAGTCGAAGATCTG 58 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113089 2 1 4 86 2R 12649190 12649208 ACTTACTCAAAGCCGAGGG 59 12648211 12648921 GCTCATCCTTATTCGCATCG 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 3 2 3 169 2R 12752526 12752604 AGAATAAGCAGAACGGATCTG 58 12752377 12752396 ATACTGTGCATACTGAGTGG 57 NA Drosophila melanogaster 61 fat-spondin FBgn0026721 FBtr0086976,FBtr0086975 1 2 2 80 2R 12945284 12945302 AGCTGGAAGGAGTCAATGG 59 12945342 12945426 GTTGGGTGACATATAAGAGATGC 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 2 7 9 80 2R 12959277 12959296 GAGATGACAACACCCAAACC 59 12958995 12959238 GACTTGAGCTTGAGTGTTATCAC 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087005,FBtr0100258 1 2 3 184 2R 12982552 12984740 TTGTTGAGGGAATTGCATTGAG 59 12982389 12982407 GTGTAGCTGTGCTTGATGG 58 NA InUTR Drosophila melanogaster 61 CG15611 FBgn0034194 FBtr0086981 3 1 2 165 2R 12996629 12996647 ATCGATCGATGTGGTGGAC 59 12996776 12997684 CTCATCCTCGTGGCTATCG 59 NA Drosophila melanogaster 61 Prosalpha5 FBgn0016697 FBtr0086911,FBtr0086910 3 2 2 87 2R 13300527 13300545 ATTGGAATTTGCACGCCAG 59 13300654 13300672 TCTTCTCCACAGTACTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 2 5 5 182 2R 13400213 13400291 ACTTCTTGAGCCAATCTGG 57 13400436 13400455 GACTAAGGAACTCAGAGTGG 57 NA Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 1 2 2 89 2R 13424076 13424210 GTGATGAAGATCTGCTGGG 58 13424261 13424281 TTGGGATATTGTCCACTACCA 58 NA Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 3 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 3 5 5 108 2R 14043478 14043496 GATGTCGTCGGATCAACAG 58 14042988 14043409 GAGTGTTACATCTGTGAAGCTC 59 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 1 3 3 83 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086690 3 1 8 122 2R 14311135 14311155 GTCACGTTCATAGACTTCTCC 58 14311238 14311648 CAGGTTGGCTGTATTATCGA 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0301148,FBtr0086690,FBtr0086686 3 4 8 90 2R 14312162 14312385 AGGCACCACTATACCAACG 59 14312439 14312457 GAAATGCCACTGGTGATGC 59 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 1 4 4 80 2R 14350182 14350257 GGACACAAGTCGAAGATCC 58 14350120 14350138 CGCTCGTGTATCATCACAG 58 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 2 4 4 80 2R 14363666 14363686 AGGCTATGTTGGTTAAGTGGT 59 14363164 14363627 CGTTCATAAGGCGATAATCCTG 59 NA Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 3 2 2 127 2R 14685320 14685338 GAACCACATCGATCTGTCC 58 14685151 14685229 TTACGCTTGTCTCATCGAC 57 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 2 4 5 95 2R 15024322 15024463 TCGACCAGAACGATAAGGA 57 15024245 15024263 GAAGGCATTTAACGCATGG 57 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0114605 2 1 6 123 2R 15319889 15320110 GGGAAATCAGGGCATTCAC 58 15319722 15319741 TCCTTGAGGTATTGAGCAGG 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 3 4 6 129 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319634 15319652 AACTGGAGTTCGAGCAGTC 59 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 1 4 6 90 2R 15319744 15319818 AAGAATTGCTACGGCAGAG 57 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0086456,FBtr0301503,FBtr0086451 2 4 19 84 2R 15370533 15370552 ATGCCCGATCAGATAATGCA 59 15370599 15370683 ACAGGACGAATCTTTCCCG 59 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 1 2 4 153 2R 16361413 16361434 GTAAATGTTATGATGGACGACG 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 1 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485964 16485984 TCTATATCCGCCGATATTTGG 57 NA Drosophila melanogaster 61 CG9945 FBgn0034527 FBtr0086225,FBtr0086226 1 2 2 85 2R 16506650 16506668 CTGATGTCGCTGGAATCCA 59 16506716 16506795 ACAAAGCCATCTTGACAAGC 59 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629,FBtr0113100 2 2 2 80 2R 17054330 17054406 AACGTAATGAAGGGAAATGCTG 59 17054271 17054291 CTTGTTAAGGTCCATGCTGTC 59 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 2 3 3 80 2R 17059014 17059035 GGTAAATGTTACGGACTCACTG 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302707,FBtr0302701,FBtr0302706,FBtr0302705 2 4 8 148 2R 17196043 17197141 GAGTCCCACAGAACTCGAC 59 17197251 17197271 GAATCGATACTCGCTTGTCTG 59 NA Drosophila melanogaster 61 CG11474 FBgn0034688 FBtr0071801 2 1 2 113 2R 17960544 17960562 TACTACACCTTCCGTGTGC 59 17960379 17960468 TTCAATATCGGTACCCACCG 59 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 3 2 2 159 2R 17969992 17970011 GATCTTCCGACAGATGTGGA 59 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 2 3 3 80 2R 18113468 18113488 CTATACTACACGTTGGGAGTG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 2 3 4 81 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222370 18222450 CTTTAGACAGGGAGCTCTGAG 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273318 1 4 5 156 2R 18595830 18595850 TGGAAACCTTCGATGATTTGG 59 18595968 18596202 TCGTTATCTTCGGCCAGTG 59 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 2 2 2 80 2R 18706464 18706938 ACAACGAAGATTTCTCGGTG 58 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 1 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 retn FBgn0004795 FBtr0072072,FBtr0072073 2 2 2 80 2R 19520719 19520738 CCTACTATGGACTGTAGCGG 59 19520779 19529773 ATCACCATGTGACAAATCGTC 59 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 1 2 4 108 2R 19833770 19833974 AATACCAAACGCCAAGTGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 3 4 4 92 2R 19941625 19941645 TCTCAGGTATTCTTCGTTGGA 58 19941484 19941572 GGACTGTTGACGTACATCTC 58 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301274 1 1 2 95 2R 20046597 20046675 GTGCGTAATTTCTCGAACGA 59 20046521 20046539 ATTACGGACTTCACGGGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 2 2 2 68 2R 20046538 20046556 ATTCGCAATGATTGCAGCA 59 20046435 20046506 TGGGTGGTACAATTTGGAG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 3 2 2 80 2R 20046438 20046510 AGCTCTCCAAATTGTACCAC 57 20046377 20046396 CGGAGATCTGAACAAATCGG 58 NA Nonspecific Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 3 3 3 80 2R 20398305 20398386 TATTCGTAAGGTGTTGGAATCC 58 20398246 20398264 AGCAGACTGATGAGTTCCT 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072434 1 2 3 99 2R 20660803 20660823 GTGAACTGGATACTCTTACCG 58 20660308 20660742 ATCTTGGTCACTTGAGCCT 58 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 2 2 2 92 2R 20828707 20828725 GAATTCCCTGGACAACCTG 58 20828566 20828651 CATGGAACGGTTCCTTCTC 58 NA Drosophila melanogaster 61 CG16940 FBgn0035111 FBtr0072486 1 1 3 138 3L 212774 212852 CATAGCCAAGTAATGTCGGA 57 212950 212971 CATTAGACTCCATTTCCCTCTG 58 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 2 5 5 84 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241426 241445 GTAATTTGTGGCTCGGTTGG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 2 10 10 80 3L 302294 302370 TGTGATGGTTACCTGCCAG 59 302411 302432 TATGTTGGAGAAGATAAGCCGA 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 2 2 10 103 3L 298045 298063 ACTGTGAAATCGTCACAGC 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 1 2 2 110 3L 987333 987351 GAACTACGGCACCAATCTG 58 987424 988752 GAACGAACAATCCTTCCGTG 59 NA Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 2 2 2 124 3L 1253220 1253310 GAGTTCGATAGAGAATGCCC 58 1253397 1253415 TTCTCCTGGATGAAGCGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 1 4 4 110 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345762 1345780 CTTAAGGAATGCGTTCGGC 59 NA Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 1 2 2 94 3L 1476990 1477071 GTTACTCTGGTGGAGCTGG 59 1476914 1476932 ATGAACATGGAGTCCGAGG 59 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0072886 2 1 2 60 3L 2283025 2297482 TTTGCGATTTGTGTAGCAGG 59 2297502 2297523 TTCCAACACTCAAATATGCAGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 3 7 12 133 3L 2436111 2436130 ATCAATCTGATCCCGAGGAC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072964 3 1 4 83 3L 2503198 2503217 GAAGGGAACAAATGGAACCA 58 2500454 2503153 TAGGGATACGTGGGATTCTC 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072960 3 1 5 149 3L 2558032 2563832 TTGATCATGAAGCGCAAGC 59 2557901 2557919 ATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072958,FBtr0072959 2 2 5 148 3L 2558030 2560128 ATCCAGTGAGGAGAAGCAG 58 2557900 2557919 TATACTTACGGATCTCGGGC 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 4 5 163 3L 2607829 2607847 ATTGATCCGAATGTGCAGC 59 2604271 2607704 ACGTTGTTTCTGATGGTTACC 58 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 2 2 2 85 3L 2659738 2659816 CTTAACCATAGGTTATGGGCT 57 2659863 2659881 TCATGGACTCAGTTACGGA 57 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776 2 2 4 167 3L 2941469 2941490 TTTATAAGAATCAGATGCGCCG 59 2941618 2947888 AGAGATTGTGGCCTGTGTC 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 1 6 15 80 3L 3083800 3085212 CACTTATATGGTCACGCCG 58 3085253 3085274 TGATATGGTGCATAGAAGTTGG 58 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073097,FBtr0302300,FBtr0073095,FBtr0302301,FBtr0073096,FBtr0073098 1 6 6 87 3L 3221935 3221954 CAATTGGTTGATCATTCGCA 57 3221695 3221885 CAAGTTGTTTGGCTCTGTG 57 NA Nonspecific Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 2 4 13 81 3L 3516815 3552793 AAATGCTAAAGATGGCGTCAC 59 3552836 3552854 GAAGCTGTGCGAAAGTCTC 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 3 7 13 128 3L 3588068 3593334 AACAAACCACAAGACTGGC 58 3593424 3593444 CGAATGGTACTTCATCTCCTC 58 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 3 2 2 80 3L 3812402 3812479 TGTGCTCATTGGTTTACTCG 58 3812520 3812540 TACGGAGTCACTATCAACTGG 59 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0112845 1 1 4 80 3L 3834620 3836032 GCAGACGGTTCCATTTACC 58 3836076 3836094 CTGGTATTGATTGCCCGAG 58 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 2 3 3 82 3L 4023745 4023763 CCCAGGATGTCCATGTCTG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 3 2 2 80 3L 4287618 4287698 GTTAAGAATTGGCTTGCTAGC 58 4287740 4287758 GAAACTGAACTTGGTGCCA 58 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 2 5 5 93 3L 4505302 4505412 AAAGTTTGAACAGGTTCGCA 59 4505228 4505251 GGTAGAGCTCTTTATGAGATTTGC 59 NA Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301608,FBtr0301519 3 2 5 80 3L 4503571 4503595 GAGAATGGAAGTACATAGTGAACAC 59 4503448 4503534 AACTCTCGACGGGATTACTG 59 NA Drosophila melanogaster 61 CG4669 FBgn0035598 FBtr0077171 2 1 1 109 3L 5227759 5227777 TCCTTCAAGATGTCAGCCC 59 5227898 5227916 AGCAAGGATTGTAGGGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0300031 3 1 2 82 3L 5500545 5500563 GAAGTGTGCCGAGAATCTG 58 5499377 5500500 ACGTTGACATTACTATGGGC 58 NA Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134 3 1 2 131 3L 5555965 5556197 ATATCACCACCAACAAGAGC 58 5555853 5555871 TGATGTTGATACTGCGTGC 58 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 1 3 3 80 3L 5753886 5753963 GAAATCACTTTGGACCAGGA 57 5754003 5754024 ATAGCTCAGTTTGTCTATTGGG 58 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 1 3 3 80 3L 5753886 5753963 GAAATCACTTTGGACCAGGA 57 5754003 5754024 ATAGCTCAGTTTGTCTATTGGG 58 NA Drosophila melanogaster 61 Bj1 FBgn0002638 FBtr0077076 2 1 3 115 3L 5925709 5925727 TGACCTCGCTAATAGCCAG 59 5925405 5925630 TTTGTCACCGAAACTGGGT 59 NA InUTR Drosophila melanogaster 61 BHD FBgn0261111 FBtr0076834 3 1 1 87 3L 7233063 7233081 GTGCTCATCGAAGAGTGGA 59 7233188 7233208 CAAGCACCTTCTTAAGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Sh3beta FBgn0035772 FBtr0076872,FBtr0076873,FBtr0302548,FBtr0302547 1 4 5 60 3L 7361074 7361999 CAATAAGGAGGTGAAGAAGCG 59 7361034 7361052 GATGTTCTTGCTGTCCAGG 58 NA DesignRelaxed Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 2 5 5 131 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365692 TTTACGACAGGTAGCTAGGC 59 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 2 3 3 82 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607900 8607976 TCCACAGTCCATCATTGCA 59 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 2 5 5 126 3L 9101076 9101096 TATACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076432,FBtr0076435 2 2 4 81 3L 9330026 9330098 CCAAACGTTTCCGAATCTAGG 59 9330139 9330159 CAGACCATGAGAGTTCTTCGA 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 2 3 6 85 3L 9338852 9338937 GAATCGAGGGAAGTCTGCT 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 CG32040 FBgn0052040 FBtr0076440 3 1 1 91 3L 9347870 9347888 GATTATGGTTGCTCAGGCG 59 9348004 9348022 CATACAGGGATTCCGTAGC 57 NA DesignNoJunction Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 2 7 7 91 3L 9393610 9393692 AGAACATTCGTCCCATGTG 57 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 1 7 7 90 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393537 9393555 ATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 Shc FBgn0015296 FBtr0076458 1 1 1 106 3L 9420340 9420358 CATTCAACGTGCGGTACAC 59 9420490 9420508 GCAAACTCGATTGATGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 3 4 4 81 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 3 7 8 100 3L 9817650 9817671 GAAGTCGACGATCAAATAACGA 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 3 3 3 80 3L 10889923 10889942 CGACAAGGATGGATTTAGGC 58 10889708 10889882 GAGGTTACCAAGAGTACCTCC 59 NA Drosophila melanogaster 61 CG42671 FBgn0261553 FBtr0302700,FBtr0302698 2 2 5 121 3L 11219889 11222218 TACCTTTCGAAAGTGTGCT 57 11222303 11222321 ATACTCGGAGGATTCACCA 57 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300097 2 2 3 88 3L 11684200 11684218 CTTTACAGTTGTCCGCTGG 58 11684072 11684148 CTGCCTACCGATCAATTCC 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 3 3 4 80 3L 11769205 11769288 ACTTACTGTGATGATACACCAC 58 11769146 11769167 TAGCACTTCACATATGTGTTGG 58 NA Drosophila melanogaster 61 CG32112 FBgn0052112 FBtr0075917,FBtr0075915,FBtr0301047 3 3 3 80 3L 12737070 12737148 TTACAACTGGTGTCATGAGC 58 12737190 12737209 GTTCTCTGTACTGTCCATCC 57 NA Drosophila melanogaster 61 CG32106 FBgn0052106 FBtr0075947 3 1 1 69 3L 12768576 12768594 CAGCACTGAAGAATTGGGC 59 12768465 12768485 GAGTCTGGTGAAGTTTAGACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934 1 1 3 121 3L 12844714 12844732 AATGGCTATCCAGGTGGAC 59 12844815 12845356 GTACAGTAGTTTGTTCCAGGG 58 NA Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 1 1 1 151 3L 13003078 13003096 ATGAACGATTTACGGAGCA 57 13002873 13002892 TTTCCGGTTTGTAAAGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 RpS4 FBgn0011284 FBtr0075885,FBtr0075884 1 2 2 88 3L 13035389 13035407 CACCAAGATCGTCATGCAG 59 13035458 13035550 TGATGACATCCATGTAGCCA 58 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 3 3 4 175 3L 13462162 13462887 GCATGAACAAGGTCTTGCC 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0075812 2 1 2 150 3L 13499658 13499745 TGTGCCAATACTGCAAACG 59 13499859 13499877 AGGATTCGGATGTATGGCC 59 NA Drosophila melanogaster 61 CG8783 FBgn0036397 FBtr0075786,FBtr0075785 3 2 2 92 3L 13994647 13994668 ATCGGTTACTGTACAGGTATCC 59 13994517 13994595 CATAGGGATTGCGCTTTCTG 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 3 7 7 80 3L 14407795 14407884 GAGGCTAAGGAAATTACGATCC 58 14407736 14407756 TCGATCACCCTTCTTTAGACG 59 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619 1 1 2 161 3L 14592037 14593037 AAGGACAGATGACCGATCC 58 14591894 14591912 AGTTAAAGGCGGAATTGGC 58 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG13457 FBgn0036482 FBtr0075654 3 1 2 83 3L 15124312 15124380 AAGACCGGTGAATGTTCCA 59 15124247 15124270 GTTCTTTATGTAGATCCGTTGGTG 59 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 3 4 4 142 3L 15505711 15505729 TCTGTACCACGATGAGGAG 58 15505834 15505912 TATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 2 3 5 80 3L 15857119 15857139 TTATATTGGTGACGTCGTCCT 59 15853118 15857077 TTGTCACGCCTATCATCGA 58 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 2 2 7 102 3L 16069728 16070085 GAGAAGAGTGAAGGATATGAAAGTG 59 16070145 16070163 TGCTGGAGCTCTTTGACTC 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0075450,FBtr0075451 2 2 6 142 3L 16108919 16110653 CAGAGTCCATCGTCTATGACC 59 16110757 16110775 GTAATCTGCGGCAGTTGTG 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 2 3 6 88 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109335 16110657 TGTTGGTCATAGAAGCTGCA 59 NA Drosophila melanogaster 61 mbf1 FBgn0026208 FBtr0075394,FBtr0075393 3 2 2 99 3L 16567986 16568004 AAGAAAGCACCGAAATCGT 58 16568066 16568295 CAGCACCATACTTCTGTTGG 59 NA Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 2 2 2 68 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854419 16854439 TGCATGTAAACTGTGAACCAG 59 NA DesignNoJunction Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302647,FBtr0302649,FBtr0302648 1 3 5 81 3L 16983966 16984120 GAGCACATTCGTAGATGACTC 58 16984163 16984181 CACCAGCTGTGTTGAATGG 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075012,FBtr0075005,FBtr0075006,FBtr0075007,FBtr0075011,FBtr0300340,FBtr0075003,FBtr0075010,FBtr0075009,FBtr0075008,FBtr0075013,FBtr0075004 2 12 12 143 3L 19311991 19312011 CTTCTTCCTGTTCATGCACAC 59 19306299 19311886 TTGATGTCATCGTGCTTGC 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075004 1 1 12 80 3L 19301790 19301868 CTACATCAACATGATTCGAGACC 59 19301732 19301750 TTGACAGAGTTCCAGGGAG 58 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0273417,FBtr0290044 3 2 3 119 3L 19486221 19486612 CAATGAGGACACGCTTCTG 58 19486120 19486140 TTGAACATCTCCAGATACGGT 59 NA Drosophila melanogaster 61 Rcd7 FBgn0260461 FBtr0074937,FBtr0074936 1 2 2 80 3L 19539057 19539245 TTGTACAGGTTCATCTGTGTC 58 19539285 19539305 GTCGATGATTATTTGTCCCGT 58 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 2 3 3 80 3L 19809755 19809832 AGGAGATTAAGCACCTCGTC 59 19809694 19809713 GAAAGTTGCCATCCAGTTCG 59 NA Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 3 3 3 81 3L 19809756 19809834 AAAGGAGATTAAGCACCTCGT 59 19809695 19809713 AAAGTTGCCATCCAGTTCG 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 2 2 6 86 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851538 19851556 AGAGTCCCAAATTCTTGCC 57 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 1 5 5 143 3L 20381818 20381836 CTACTTCGAGCCCAAGGAC 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 3 9 18 130 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809926 20825957 TTTGACTTGTTCCCTCTCGA 59 NA Drosophila melanogaster 61 CG32442 FBgn0052442 FBtr0089797 2 1 3 106 3L 21522001 21522069 TAAGGTGACGAGCTCTACTG 58 21521914 21521932 ACATGCAAAGAGGCATTCG 59 NA Drosophila melanogaster 61 CS-2 FBgn0029091 FBtr0078476,FBtr0114557 1 2 2 80 3L 21957614 21957635 ACGAATTCGTTGAGTACTTTGG 59 21957676 21957803 GGTCGCCATTAGATTGCAC 59 NA Drosophila melanogaster 61 CG14457 FBgn0037174 FBtr0100669,FBtr0078517 3 2 2 84 3L 22672449 22672533 GACAGTCAGGTATTTAAGAAGGAC 59 22672576 22672594 AAAGACTGTAGTCCGCCTG 59 NA InUTR Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0299882,FBtr0299880 1 3 4 80 3L 23642459 23682591 CAGCTTGTTGTATGTACGCTC 59 23682633 23682651 CAGAAAGTGCTTCAGCCAC 59 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 1 3 4 106 3R 151087 151105 TCTGACCAGATCAATCCGG 58 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078905 1 2 4 149 3R 145605 147578 GGGCAAGTAAGCAACATGAG 59 147688 147708 GTTATTTCCTGGCGTTAAGCA 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 2 2 2 80 3R 231256 231328 AGACGTACAACTAAGTCTGAG 57 231370 231388 AGCCTCTGGTAACTTACGA 57 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 1 4 4 88 3R 293415 293433 TCTACTACATGATCGCCGC 59 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 Or83b FBgn0037324 FBtr0113193,FBtr0078794 2 2 2 83 3R 1233859 1233877 GATACCTAGGATACGCGCT 58 1233433 1233812 CCATGACGGATGAACTCTC 57 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 1 2 2 80 3R 1395126 1395144 ATCGTCGCTATGCATACAG 57 1395187 1395309 ATCTTGGTGAAGGTGTTCTC 57 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 1 7 7 80 3R 1423547 1423565 CCAGACGTTCAAGCAAGAG 58 1423229 1423506 TCCATAAGTTTGCTTTCCAGTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300912,FBtr0300908 2 2 12 93 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1587157 1587375 TACCTCCATAACATGTCCGA 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 2 2 12 81 3R 1586683 1587381 ACAAATTCGGACATAACTGGC 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 3 2 12 89 3R 1586673 1587369 ATAACTGGCAAATCGTGGG 58 1586602 1586620 TCTTGCTGTTTAGGGATCG 57 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 2 2 2 80 3R 1699264 1701811 ATCGATCTATCAGATCTGATGCC 59 1699206 1699224 ATTGACGCTGTAGACGACC 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 1 5 5 84 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216739 2216757 TTCGTGTAGTTGTCCAGCT 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 2 5 5 117 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216706 2216724 TGGAACTGGTGATTCTGCA 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0113203 3 1 5 88 3R 3693817 3693835 CACATCACACGATGATGGG 58 3691470 3693770 CTCATGTAGAGTAGCTTCTTTCTG 58 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 3 3 3 139 3R 4499021 4499107 GATCACTACCAGCAAGGAG 57 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 pum FBgn0003165 FBtr0081994 1 1 5 80 3R 4982891 4982909 GCAGAAACGCTACATTGGA 58 4924449 4982850 TCGTCACTTACAATATGCTCCT 59 NA Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 3 3 3 97 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064804 5064822 TGTTCAGGTTGACGGATCC 59 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082056,FBtr0082055 1 2 2 80 3R 5159494 5159513 GACCTTAAGCCACAGAACCT 59 5159373 5159452 CTGAGCAAACCCAAAGTCTG 59 NA Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 1 2 2 99 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226568 5226586 TGGTAAACCAGACGACCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 1 2 14 96 3R 5260133 5269739 AGCTTTGTTCGAGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 2 5 14 96 3R 5258550 5269739 ATTTCAGTTCCGGTGAGTC 57 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 3 5 14 97 3R 5258549 5269739 CATTTCAGTTCCGGTGAGTC 59 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 1 2 2 69 3R 5341136 5341154 AGTCTTCCCTAGTCCGGAG 59 5341034 5341052 CCTCACTACTGTCTCCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833 3 1 4 80 3R 5521146 5521165 GCACTCTCCTACCACTATCC 59 5520519 5521106 AGCGCAACTAATTATCGAATGG 59 NA Nonspecific Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0301386,FBtr0082197 2 2 6 137 3R 5930726 5930793 AAGGTGAGTGCTATCGCTG 59 5930607 5930626 GTGCGACAGATGATACTCCA 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 3 3 4 86 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122530 ATTTCAGGGTAATCGAAGCC 58 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118 3 1 2 94 3R 6516215 6517080 CAGTCCTCAGTCGAAGCTC 59 6517138 6517156 ATTGGACCACGATGCTCTC 59 NA Nonspecific Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 2 4 4 85 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525809 6525956 CGTTCAGATCGTTTATCTTATCGAG 59 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 3 4 4 87 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525811 6525958 CTCGTTCAGATCGTTTATCTTATCG 59 NA Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082278,FBtr0082275 1 2 4 169 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6611949 6611967 ATGACGATCCCGAGAATCC 59 NA DesignNoJunction Drosophila melanogaster 61 SelR FBgn0037847 FBtr0082294,FBtr0082292,FBtr0273347 2 3 7 104 3R 6692327 6692345 GGAGACCAAGTACGACTCG 59 6689538 6692261 CGTATACGTTCTGGTATGCTG 58 NA Drosophila melanogaster 61 KP78b FBgn0026063 FBtr0082408,FBtr0301427 1 2 2 60 3R 7173532 7173554 GGTGTCTGCTATTGAATACTGTC 59 7173494 7173512 CTCTGCCTTTAGATCCCGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 2 3 3 96 3R 7279014 7279185 GAGATTGGAGAACCGAACTG 58 7278937 7278955 TAGGCAGGGTCAATGTAGC 59 NA Drosophila melanogaster 61 Taf12 FBgn0011290 FBtr0082442,FBtr0290205,FBtr0082440 1 3 3 123 3R 7504585 7504674 AACACTCCCATGCTTACCA 59 7504480 7504498 TGTCCTCGACAAAGTCGTC 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082470 1 1 4 89 3R 7614735 7614807 GACCTAAAGTCTGCACTACAG 58 7614858 7614876 ATAAATGGCTGTGGCATGG 58 NA Drosophila melanogaster 61 CG31211 FBgn0051211 FBtr0082480,FBtr0082479,FBtr0082481 1 3 3 61 3R 7777165 7777184 CCGTAAACGATGTCAATGGT 58 7777208 7777456 CACCACAAGCATCAGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082498 1 1 15 80 3R 7817845 7817865 TTCAAGTTCTGAAGAGGTTGC 58 7815237 7817806 GGCATAAAGCTGGAGTTATCTG 59 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082557,FBtr0082556 2 2 2 100 3R 7834941 7835021 CCATGATGAGATCTCGCGT 59 7834859 7834877 GTAGACCTCAACGGTGGAC 59 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082542 2 1 3 105 3R 7922730 7932873 TTGGGATACAAGTAGTCACCTG 59 7932939 7932957 GTCGTAAGCTGTCCCTCAG 59 NA Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 3 2 2 81 3R 8380452 8380470 ATTTGTGGAACAGCCTCGA 59 8380316 8380413 GCATAGTATCTATCCACAGATATGC 59 NA Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 3 2 2 142 3R 8509986 8510005 TATTTCAAGCGGTACCTGGG 59 8509804 8509882 GAAACGAGGCTCATTATCCG 58 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743 3 1 3 120 3R 9134614 9135198 AGCGTACTTTCAGATAATCGC 58 9135280 9135298 ATCCCAGATTCTGGAGCAC 59 NA Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 2 2 4 124 3R 9468114 9468132 GACGGACAGGGATCATACG 59 9462788 9468027 TAACCGTAGCCGTCATAACC 59 NA Drosophila melanogaster 61 cv-c FBgn0086901 FBtr0112632,FBtr0112630 1 2 3 80 3R 10225507 10233891 GATCGCTATTTAGCAGAAATCG 57 10225448 10225466 CATCTGTGCATATTGCGGA 58 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 1 2 2 148 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188899 11188917 GAAGTGAACTGGGTTACGG 58 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 1 4 4 80 3R 11217401 11217419 CGATGAGTCCAAATCCCGA 59 11217458 11218031 CCTTATCACCAAATACCTTGATCG 59 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480 2 1 2 80 3R 11885083 11885211 AGGATAATCGGACGGATGTC 59 11885253 11885272 TCATATGATACTGCAGGCGG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331 3 1 9 88 3R 12122988 12123007 TGCGAAGACTGTTTCAAGAC 58 12123055 12123187 CTATGTCTCCATTGTCTTCCCT 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 3 2 2 85 3R 12819315 12819333 ACTTTAATCCTGGACCGCA 59 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 3 2 2 80 3R 13216264 13216282 CTATGAGCTTGGTCGTACC 57 13202973 13216221 ATGTATAAACACGGGTCCAG 57 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 1 2 4 149 3R 13308945 13309027 AAATGTGAATGAACCCGCA 58 13308814 13308833 TTATTCAGATCGATGCGTCC 58 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083534,FBtr0300242,FBtr0083535 3 3 7 92 3R 13758155 13758173 TGCTCAGTAGTGTCCTGTC 58 13763297 13792208 ACGAGTCAGTTGAACTTGGT 59 NA InUTR Drosophila melanogaster 61 htl FBgn0010389 FBtr0083549 3 1 3 106 3R 13874867 13874888 TCCCATCGTTAAGTAAACTGAC 58 13874242 13874260 CTTCTGGAGGGTGGATTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0100275,FBtr0301556 3 3 6 87 3R 14079505 14079583 AGATTGGAGATCTGCCTGG 58 14079436 14079454 AAATACGACTGCGGAACCA 59 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 1 1 1 69 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192795 14192813 GGACGTTAAACACGCTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Vha100-2 FBgn0028670 FBtr0083656,FBtr0083657 2 2 2 88 3R 14216910 14216990 CAAGGCTCATGCCAATCAC 59 14216840 14216858 TTCCAGAGAATCCTGTGGG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 1 3 14 90 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 Mekk1 FBgn0024329 FBtr0301775 1 1 2 80 3R 14564314 14565030 GCGTCGGAAGAAAGTTGAG 59 14564252 14564271 AAAGCACCAATCCGATTTCG 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 3 5 5 85 3R 14585655 14585786 ACCTGAAAGATCCGGACTG 59 14585588 14585606 CAATGATCACGGTCAGTGC 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110919 3 1 8 82 3R 15419812 15420234 ACTTGAATGAGAACTCAAGTGG 58 15420277 15420295 CGAGTCCTCCAGATCATCG 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487,FBtr0100457,FBtr0089484 2 5 5 80 3R 16366166 16366254 ATAATGTCAGAGATCCAGTCG 57 16366106 16366124 CGATGATTGACCGGATAGG 57 NA Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 2 2 2 128 3R 16384799 16384817 CAAATGGTAGCCCATGCAG 59 16384907 16384991 ATTGACCGCTTGTTGTATCTC 58 NA Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 3 2 2 83 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401268 16401287 GATAAGATTTCCGTGACGCA 58 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0113257 3 1 2 129 3R 16753179 16754410 GTGAAGCAAGCTGAACTCG 59 16754580 16754598 TTTCCTGGTAGCCGATGTC 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0110937 2 1 16 80 3R 17036414 17036517 GTTGCTCAAGAAAGAAGAGGA 58 17036557 17036577 GTGGGTATCAGATCATAGCAC 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084070 3 1 22 185 3R 17200940 17200958 ACGACGACAGCTACTTCAC 59 17184783 17200791 TGAACTGACCTTGAGCCTC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 81 3R 17202595 17202613 TTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301212,FBtr0100124,FBtr0110891,FBtr0301211,FBtr0084112 3 5 5 80 3R 17349341 17349360 GTGTCATAGGCAATGAATGC 57 17349403 17349484 GTCTCTTGTAGCGTGTTCC 58 NA Drosophila melanogaster 61 CG5849 FBgn0038897 FBtr0301164,FBtr0084125 1 2 2 83 3R 17566291 17566309 CACGGCTATTATGGCATCG 58 17566356 17567397 GCTACGTATACGGTGTGGT 59 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264 3 1 2 130 3R 17856451 17856545 TTGTCATATGCTGGTATGCC 58 17856340 17856358 ACTAATCCGGGTGAAACAC 57 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 2 5 5 88 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894895 17894913 CATAATCTTGCAGCCGGTC 59 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 2 2 2 146 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828597 18828615 TGAACAGTTTGTCCGACAG 58 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 2 3 3 80 3R 18876581 18876602 TTTGCTTCTCCAATGATGTGAG 59 18876458 18876540 CGTTATTGGCCGTCAAAGG 59 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 2 2 3 186 3R 18878910 18879087 CAAAGAAAGCACTGATTCCGA 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 1 2 4 173 3R 19453174 19457217 AGAGCCAAAGCTATCGACC 59 19453019 19453037 CGTCGATATCAGCAGTCGA 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 5 6 81 3R 20045367 20045387 TGAACATCTACAACGAACCGA 59 20025658 20045326 GGTGGATTCACGGTAAATGAC 59 NA Drosophila melanogaster 61 CG17781 FBgn0039196 FBtr0113279,FBtr0084623 1 2 2 83 3R 20199862 20199880 GTGGACACGAAATGGACAG 58 20199732 20199815 TAGGCATAGTCCCACTTCG 58 NA Nonspecific Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0084620 1 1 2 80 3R 20212193 20215376 GACAATGATAGACAGCATGGG 58 20212133 20212151 CGCTGGAAGTATTGACGAC 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581 2 2 18 127 3R 20521078 20521096 CAAAGCGTGTCATGAGGAC 59 20525144 20527824 CAGGATGGTGTTCATTTGCA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 1 3 18 80 3R 20521838 20528850 CGATGACTTAGTACTCAATCGC 59 20528891 20528909 TTGTTCATGTGGTGCATGC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 1 3 18 98 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521837 20527818 GGTGTTCATCTAAGTCATCGA 57 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084708,FBtr0084709 1 2 2 80 3R 20691552 20691737 GTTACCAAAGTGCAGGTGC 59 20691781 20691799 GAACTCCCACCGGATACTG 59 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 2 2 2 161 3R 21053857 21056364 TTTAATAAAGCTACTCTGGGCG 58 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 msi FBgn0011666 FBtr0084881,FBtr0084882 1 2 2 132 3R 21425812 21425831 CCCTCATATCACAGAACCCA 58 21425926 21426003 TAGGGTGCATATCTGACGC 59 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289 2 3 5 198 3R 21507902 21507921 ATGATCAGTGCCAGTATCGA 58 21508146 21508790 TTCCATGTGGCCAATTCAC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 1 2 10 85 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424358 22424376 ATCACATCTTGTGCCTCCA 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 2 4 9 162 3R 22699731 22699803 CAACAGCTACCACACTCCT 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 1 2 2 80 3R 22796487 22796506 ATCATGGCCAAACTATTGCA 58 22796543 22796626 CTGATACCACAGTAAGAAGTATCTG 58 NA Drosophila melanogaster 61 CG5521 FBgn0039466 FBtr0301134,FBtr0085069 3 2 2 81 3R 22796486 22796505 CATCATGGCCAAACTATTGC 57 22796543 22796626 CTGATACCACAGTAAGAAGTATCTG 58 NA Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 3 2 2 81 3R 22984666 22984742 AACGATCTTTATGAGATCCGG 57 22984785 22984803 ATTTCTTCTTGCGTCCCTG 58 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085125 1 1 3 80 3R 23056338 23056356 AGCTGATGACCAAGTTGGA 59 23056153 23056298 TATCATGACTCCACTTCTTCTCC 59 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 2 5 5 124 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102110 23102128 GATTTCTTCAGCACTCCGT 57 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 1 3 3 124 3R 23512758 23512776 ATGACACCCAATTTGTCGA 57 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0085261 3 1 2 115 3R 23795161 23795181 AGGCTTTGTATGACATCTGCT 59 23794902 23795086 GGACATTGTGACGTTAATGCT 59 NA Drosophila melanogaster 61 CG34354 FBgn0085383 FBtr0112564,FBtr0300606,FBtr0300607 3 3 3 84 3R 23973960 24027894 CAACTCCAAGCCAGAACAG 58 24027941 24027960 GGTGAATGCATCTTTCAGCT 59 NA Drosophila melanogaster 61 fkh FBgn0000659 FBtr0085321,FBtr0300259 1 2 2 60 3R 24409375 24409393 GAGAACGGGTGCTATTTGC 59 24409333 24409352 TAATGGCCTCCTTCTTCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085299 3 1 6 88 3R 24425714 24426450 AGCAAGATGACTCCATCAC 57 24426502 24426520 CTTTAGGTTCTCGTCGGTG 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322 1 5 6 82 3R 24639657 24639676 TACTGCTACGGATATTGGCG 59 24639719 24640880 CGCTCAAACACCTTATAGCAG 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 3 4 4 88 3R 24700982 24711988 ACTGACACATGCCATACCC 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 2 5 10 117 3R 24959139 24960776 ATTTGAAGCTTGGCTTCGT 58 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 2 2 2 80 3R 24989876 24989957 GATCCAGAAACCGACAAGC 58 24989997 24990019 TCGATGGGCTATAGTCAATACAG 59 NA Drosophila melanogaster 61 CG31033 FBgn0039705 FBtr0085530,FBtr0085529,FBtr0300024,FBtr0085528 3 4 5 82 3R 25653846 25653867 TCATATGCTCTGTAAGAGACGA 58 25653706 25653804 GTGTTCGTTTGTAAACGTGG 58 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 2 6 6 80 3R 25690545 25690626 GAGGGCGATAATCAAGATCC 58 25690484 25690502 CGTGAAGATCAGTATGCCG 58 NA Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 3 2 2 96 3R 25826680 25826758 TGCATATGGATCACGATAGCT 59 25826816 25826834 GACATGGTCATGGTACCGT 59 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 1 2 2 80 3R 25844463 25844481 TCAGACGCATCCTAACGAG 59 25844344 25844419 GTGATCAGAGCTTGCTCCT 59 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602,FBtr0100418 2 2 2 80 3R 25844458 25844477 ACGCATCCTAACGAGTATCC 59 25844340 25844415 GTTGGTGATCAGAGCTTGC 59 NA Drosophila melanogaster 61 RpS7 FBgn0039757 FBtr0089423,FBtr0089425,FBtr0089422 2 3 4 88 3R 26032435 26033824 TGAACACAAAGTCGACACC 58 26032365 26032383 CATTCAGGTAGTTGTCGGG 58 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 1 4 5 81 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211910 26211928 CTTGATCTCCAGGTCGAGG 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0085674,FBtr0085678,FBtr0085673,FBtr0302605 3 5 13 99 3R 26419560 26419842 ACGCCTAGAAACTCTACTCC 58 26419480 26419498 TGACCTTGACAATGTGCTC 58 NA Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 1 2 2 61 3R 27421797 27421815 CAACTCCTACCTGAAGGGC 59 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 2 4 8 80 4 162686 162706 AATATCCTCTACGCCATTAGC 57 162747 162838 AGATGAACCCAACAAGTCAC 58 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 3 4 8 81 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162749 162840 GCAGATGAACCCAACAAGTC 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 2 8 8 167 4 157780 157853 TCGAGCAACCTTAAGACAC 57 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462 1 1 3 105 4 272789 273460 AAGCCTGAACGACCTAACC 59 272702 272723 AACCCGACATCTTAATATTGCG 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 3 2 6 91 4 352622 363559 TTGCAAACACAATTGCGTG 58 352549 352569 CGTAAGCTATGTAAGCTGTGC 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300557,FBtr0300554 2 2 6 98 4 350954 363555 AAACACAAGTAATAGGCGGC 59 350033 350051 GGAATGCGTTTACCACTCG 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 2 4 4 81 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383642 TGTAGAACTGTGCAACGAG 57 NA Drosophila melanogaster 61 CG9935 FBgn0039916 FBtr0089102,FBtr0110907,FBtr0110906 1 3 3 80 4 663048 663129 ACCATTCTTGAGTCAGAGC 57 662986 663004 TGATTGTTCCAGTGTCTGC 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 1 4 4 80 4 714052 714072 ATACCAACGATGAGGAGTACG 59 713455 714012 CATGAGGTTGAATTTCCTCGG 59 NA Drosophila melanogaster 61 eIF4G FBgn0023213 FBtr0112904 1 1 3 117 4 948105 948123 AATATCGTTGGCGTTAGCG 58 947275 948026 CCGTTGATACATACTCTGCTG 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 3 2 9 142 4 1059054 1060650 AGTGCTCTTCAGCTAGACG 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 3 8 8 87 X 396179 396197 TAGCAAACCGTTTGTGCTC 59 396248 396332 CTCATTGTGAGCCAAGGAG 58 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 1 2 4 84 X 516383 516478 CATATCAGGGAGCTTCTTCAG 58 516524 516542 TCTTTCCGTTCAGGAAGTG 57 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 1 3 3 80 X 528198 528219 AGTTGCTAATCATACAAGCCTG 58 528071 528160 TGGTCACGTCTATCCTAAAGAG 59 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 3 3 3 88 X 1861943 1861962 GTGAAACGCCAGACTTATCC 59 1862013 1870613 CTGGCATGTCACATTCACC 59 NA Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 1 2 2 80 X 1985914 1986004 CCTGATCAAGATTCTCAAGGC 58 1986045 1986064 AGCACCTTCAGGATGTAGTC 59 NA Drosophila melanogaster 61 ph-d FBgn0004860 FBtr0112843,FBtr0070433 2 2 2 283 X 2011721 2011739 CAAAGACGTCAGCGATGAG 59 2011393 2011411 CTTCATCCAGTCTGTCCAC 57 NA DesignNoJunction Drosophila melanogaster 61 msta FBgn0053548 FBtr0070422 3 1 2 126 X 2101598 2101617 AAGATGACCAAGCACTTTGC 59 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 3 2 2 92 X 2167973 2168068 ATTTGTATAGGAAACGCTTCCC 58 2167902 2167920 AGAATTCATCGGTGTCGCT 59 NA Drosophila melanogaster 61 z FBgn0004050 FBtr0070435,FBtr0100380 2 2 2 105 X 2342608 2342626 GGACAAGATCGTCAAGGAC 58 2342695 2342834 ATACTGTTTGCGGAGTCTG 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 2 1 1 70 X 3982330 3982351 ACTTAAGTCAGACATCAATGCC 58 3983863 3983881 CACTCAATGGAGAAGCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0301122 3 1 5 84 X 4013009 4013027 CAGGACGATCAGAATGTCG 58 4013073 4014160 CCTTATGCGAACTTAAGATGC 57 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 3 5 5 81 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015956 4016108 GTCTAGCTGTCGAGTAGTCG 59 NA Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 2 3 3 81 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372229 4372247 TCAGGATGTCATTGGCTCG 59 NA Drosophila melanogaster 61 CG15891 FBgn0029860 FBtr0100319 3 1 1 60 X 6187846 6187867 GCAAATACAAAGCCATTACCAC 58 6187742 6187762 TTGGTCTTGTTGCTCTTAAGG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 2 2 3 124 X 6263371 6263390 GGAGTTTAAGTTCAGCTGGG 58 6263476 6263564 ATACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 2 8 8 111 X 6579595 6579678 CTTCAATGTGACTTCTCCAGC 59 6579751 6579769 TATGGACAGAGCGTTGCTC 59 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 3 3 3 269 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616470 6616489 GGGCAGATAGAAGAGAAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 2 3 6 154 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680836 6681393 GACACGAAACTGTAGCTGAC 59 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 3 5 6 107 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375,FBtr0089974,FBtr0100376,FBtr0089978,FBtr0089975 3 6 7 175 X 8131037 8131055 CTAGTCAGTCGTTCCAGCA 59 8131194 8131274 TAAAGGATATCCCGCCTCG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375 1 2 7 123 X 8117880 8117899 GTCCGTGAACCAAGATAACG 59 8118074 8121915 ATTCCCATTGAGCTGTGGT 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 1 4 6 80 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8444124 CATTCATGCCTGTATCGCC 59 NA Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 2 4 6 88 X 8478536 8478554 TACTCGGAGATCCAGTCGA 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 3 10 10 157 X 8768351 8768369 TGAGAACGAGAACGAGGAG 58 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 2 2 2 93 X 8985203 8985454 CACAGCGTATTGAGAATGCC 59 8985510 8985528 GAATCGACCTTGATGCTGC 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071294 2 2 6 118 X 9003012 9005127 AATCGCAGATTTAATCCAGCC 59 9005450 9005468 CGAATCTGTCGGATGAGGT 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071297 3 2 6 136 X 9006259 9006789 TGCATTTCAAGAAGGATAGCG 59 9007761 9007780 TATCTTCACCTGCAGGAACG 59 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367 1 1 2 143 X 9502314 9502462 ACCAAACTTGAGCTAAAGCG 59 9502190 9502208 TTCATTCGGCGAGATCTCC 59 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 2 2 2 93 X 9783064 9783082 GCATATACGACACAAGCGC 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 2 2 2 86 X 10300656 10300677 CCTACAAGATCAAATATCCGGA 57 10300724 10300803 CGTAGAAGCCGTAAATCCT 57 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 1 3 3 80 X 10373679 10373697 TGAAGTACTTGTTCCGCGA 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 1 4 4 135 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 2 2 2 265 X 10947216 10947384 CAATAGTGTGCTGCGAACC 59 10946793 10946811 TCAGGTTGCAATAAACCGG 58 NA DesignRelaxed Drosophila melanogaster 61 Klp10A FBgn0030268 FBtr0073478,FBtr0073475,FBtr0073477,FBtr0073476,FBtr0073479 2 5 5 151 X 11027593 11027611 TAATGGAAAGGTGCAGGAC 57 11027384 11027478 GAAGATCGAAGACCTTGCC 58 NA Drosophila melanogaster 61 Kap3 FBgn0028421 FBtr0289955,FBtr0289958,FBtr0289957,FBtr0289956,FBtr0289954,FBtr0289959 2 6 6 80 X 11231087 11231171 GTGCAATATAAGATTGGATCGC 58 11231028 11231048 CAGCTCATTTCTCATTGTCTC 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0112812,FBtr0073490,FBtr0073489,FBtr0073488 2 4 15 137 X 11294852 11299311 CAATGCTGAAGGAGCTTCC 58 11299407 11299430 GGATACTCTGATATAAGGTCATCG 58 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 1 3 3 236 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 1 4 4 160 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444959 11445070 TCAATCCATCTTCTATGCGCT 59 NA Drosophila melanogaster 61 PhKgamma FBgn0011754 FBtr0090002 3 1 3 88 X 11592554 11592575 GCAAATGTCTAGTCGTTGATCC 59 11592624 11593367 TTGCTCGAACAGCATTTGG 59 NA Drosophila melanogaster 61 CkIIbeta FBgn0000259 FBtr0073562 2 1 6 132 X 11689030 11689147 GTTTGTTCCAAGGCTATATGGA 58 11694046 11694064 ATTCTCAGGCTCTTCGTCC 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 1 2 10 87 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848304 11856054 ATTGAGTTCGAATCGTGCC 58 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300201 1 1 7 80 X 12124392 12170551 CCATTCCAGCAGGTTTCAC 59 12170593 12170613 ACGAATATTAAGGCGATGCTC 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 83 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268334 TATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 1 1 1 83 X 13613448 13613466 CAACAACGTAAGCTCCCTG 58 13613318 13613336 TAGCTATCACTGGAGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301046 1 1 4 80 X 13731938 13731956 GATCGATGGGAAATCAGCT 57 13731782 13731894 CGAGATCACTGAGATCGTC 57 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0113318 1 1 2 174 X 14100667 14100685 ATAACTTTGCCGACAAGGA 57 14099476 14100399 CTGGTAACGATGAGCTGTC 58 NA Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615 1 1 2 129 X 14126876 14126894 AATCACATTGACCTCGGCA 59 14126191 14126784 GATCGAGTTCTTCAAACGGC 59 NA Drosophila melanogaster 61 mud FBgn0002873 FBtr0073907,FBtr0073905,FBtr0073906 3 3 3 80 X 14143264 14143282 CGTGAAGCTAACCGAAGAG 58 14143326 14143421 AGGCATCCCTTCATATGCT 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 3 6 6 80 X 15646355 15646434 TAACCAATGTTCGTTACTCCC 58 15646295 15646313 AGTTCTCCGGAATGAGTCC 58 NA Drosophila melanogaster 61 CG8974 FBgn0030693 FBtr0074187,FBtr0074189,FBtr0074185,FBtr0074188,FBtr0074186 3 5 5 166 X 15688455 15688538 AGATCCACGTAACAAAGTTCC 58 15688309 15688327 GTGGTTCGCCAAAGTTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074107 2 1 6 82 X 15754276 15755032 CACTGCGTTATACCATCCC 58 15755075 15755096 TCCCGTCTGATTTGTAATTAGG 58 NA InUTR Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 3 4 4 87 X 15769161 15769180 CAGCTAGATTTAGGCGATGG 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951,FBtr0299950 2 2 3 60 X 15991602 15991751 CTGTCGATGATCAATGTGCT 58 15991561 15991579 GCGACAGGTAAACTCTGGA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 1 4 4 83 X 16193687 16193705 CAGTGGCTTGATCTTGTGC 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 3 4 4 80 X 16649791 16649880 CTGAAAGTCAGCACTGTGG 58 16649729 16649750 ATTGGTGTTCGAGATAAAGACC 58 NA Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096 2 1 2 81 X 16843602 16845029 CGATGACAATAACCTGCTTCG 59 16845072 16845090 CTTGAACGTAATCCGCTCG 59 NA Drosophila melanogaster 61 CG5004 FBgn0260748 FBtr0302375,FBtr0302376,FBtr0074386 3 3 4 81 X 17022885 17022904 GCACAAAGATCTTTGACAGC 58 17022948 17023198 TCAATGACCTGATGACCCT 58 NA Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 1 2 2 131 X 18201377 18201395 AACTGGATCGACTATCGCA 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 1 7 9 72 X 18267444 18267466 CGTACAATAAGATCTTCACCGAG 59 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 fu FBgn0001079 FBtr0074602 1 1 1 80 X 18553392 18553410 TGCATTCCACCAATGAGGA 59 18553513 18553531 ATTCATCGCAGCTATCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251 3 2 4 150 X 20988419 20988489 CATCACATCACTCGTAAATACCAG 59 20988597 20988616 GATCTTCGGAGTAGTAGGGC 59 NA Drosophila melanogaster 61 CG14579 FBgn0031163 FBtr0077256 1 1 1 121 X 21064935 21064953 GTGCGTAACATCATCTGGT 58 21065151 21065169 TAATAGGCTCTGCTCGACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113683,FBtr0113682 1 2 3 153 XHet 23129 23147 TAGCTATAGCGTCGCTCAC 59 23262 25000 GCGTGTTCATTCTTCTTACGT 59 NA Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 1 1 1 64 XHet 63708 63726 GAGAACACTTACGTGGTGG 58 64087 64105 CAATTTCCACCCAGTGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 snmRNA:359 FBgn0065096 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31890 FBgn0051890 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:438 FBgn0065092 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32421 FBgn0052421 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32126 FBgn0052126 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31570 FBgn0051570 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:A:90C FBgn0011840 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:T:90Ca FBgn0011993 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32826 FBgn0052826 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:L:CUN FBgn0013698 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-U1688 FBgn0086044 FBtr0114320 2 1 1 99 X 9824009 9824027 ATTCATGACCAGAGGTGCC 59 9823928 9823946 AGTGAATCTTCCACTGGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-531 FBgn0083027 FBtr0113559 1 1 1 60 X 657167 657188 TGGTCACTCTTCTTTATTTGGG 58 657128 657150 CTTTGTTAAGGCTAAGAGTCGAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR32496 FBgn0052496 FBtr0074499 2 1 1 74 X 17793249 17793267 CTATCGGTTCAACTGTGCC 58 17793305 17793401 CCATTGAGCATGCTCTTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CR32730 FBgn0047092 FBtr0071016 3 1 1 183 X 7042036 7042054 ATCGTCTTGAGGACACGTG 59 7040790 7041889 AGTTCAAGCAGTCTTGGGT 59 NA Drosophila melanogaster 61 roX1 FBgn0019661 FBtr0070635 2 1 2 90 X 3756107 3756125 GAGGCTACATTCTTGCCAC 58 3755965 3756056 ACACTCTAGCTAATTTCACGAG 58 NA Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188 2 1 2 138 X 22361334 22361353 TCATCAATCCACCTGGTGAC 59 22360939 22361233 GGAGTGATGCTTGTGACCT 59 NA Drosophila melanogaster 61 CG9581 FBgn0031093 FBtr0070026 2 1 1 87 X 20063441 20063517 CTTGTCACATGCTCGTTCTG 59 20063373 20063391 TAGAAGTCCGAGTTCTGGC 58 NA Drosophila melanogaster 61 dome FBgn0043903 FBtr0074756 3 1 1 60 X 19572309 19572328 CAATGTGATCCTCTTCAGCA 58 19572186 19572204 GATCACGTACAGTTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14200 FBgn0031023 FBtr0074721 3 1 1 139 X 19404039 19404058 TGGGTAAAGATCCACAACAC 57 19404160 19404249 GAACTCACTTGCTCGAAGG 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074714 3 1 8 99 X 19390806 19400519 CTCGATTCGTAAACGCAGC 59 19400582 19400600 TTTGTTCGTTGGGCTTCTG 59 NA InUTR Drosophila melanogaster 61 CG32536 FBgn0052536 FBtr0074686 2 1 1 166 X 19169553 19170519 CTTCTTCAGTGAGCTGACG 58 19169345 19169363 TATCATCCACCCAGTCCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG15040 FBgn0030940 FBtr0074618 3 1 1 60 X 18504911 18504929 TCCATCCGAACAGTCTCAC 59 18504810 18504888 ACATGCTTGGGCAATTTCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG6481 FBgn0030936 FBtr0074620 2 1 1 60 X 18415999 18416020 TCAACGAGTATCATCAATCTGG 58 18415960 18415978 GATCATAGGAGGCGTTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33639 FBgn0053639 FBtr0091616 2 1 1 113 X 18114010 18114028 TACTGCTCGTTCATCTGGG 59 18112631 18113935 CTCCACATCCCGATAGAAGTC 59 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 1 4 4 101 X 17743515 17743534 TCATAATCATCTGGCTGGTG 57 17743365 17743451 ACTTGTAGACCAGCCTAGG 58 NA Drosophila melanogaster 61 CG8316 FBgn0030852 FBtr0074485 2 1 1 86 X 17525843 17525925 CGAGGAGCAGATTGTAGGG 59 17525775 17525794 TTATCCTCCACTACCAAGGC 58 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 2 2 2 94 X 16534257 16534340 AAATACATGGACAAGCGCA 58 16534181 16534199 AGGACCACGTTCATGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9906 FBgn0030755 FBtr0074299 2 1 1 60 X 16419026 16419044 AAGAGATGGGTACTGTCGC 59 16418984 16419004 CGTATTTGGCTATCTCATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9921 FBgn0030743 FBtr0074235 2 1 1 126 X 16225750 16225851 GTTCCGTTGGGATGTTTGG 59 16225642 16225661 TAACGGTAAATCCCTGAGCC 59 NA Drosophila melanogaster 61 CG12395 FBgn0030722 FBtr0074260 2 1 1 60 X 15956193 15956214 GATCGACGAACTTCTAATGCAG 59 15956154 15956172 TGCGTTGCTAGTAGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9172 FBgn0030718 FBtr0074151 3 1 2 253 X 15880704 15880775 AATAGCAGGATCAACATGCTG 58 15880471 15880489 TTGAGCAGATCGTCCAGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8509 FBgn0030696 FBtr0074098 1 1 1 60 X 15704200 15704219 ACTGATGCTCTTCAATCGCT 59 15704240 15704260 CAGTCCATAGGTGCTTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8191 FBgn0030675 FBtr0074083 2 1 1 60 X 15626928 15626946 TCTGTTCGTATCGCAATCC 57 15626970 15626988 ACGTACATGCTCCATACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cerv FBgn0030657 FBtr0089702 2 1 2 96 X 15471792 15471855 AAATGGCAGAAGTCGTGTC 58 15471714 15471734 TTCATTCGGATGAGATTCTCG 58 NA Drosophila melanogaster 61 dah FBgn0015926 FBtr0074007 1 1 1 81 X 15224011 15224031 GAAATATCGCAGTTTCTGAGC 57 15224074 15224154 CTGAGGCATGTGATAGCTG 58 NA Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073968 2 1 2 118 X 14960327 14960410 TTACAATGCAAGCGATCTGG 59 14960228 14960246 CACGTAGACCGTCATCTCC 59 NA InUTR Drosophila melanogaster 61 CG9514 FBgn0030592 FBtr0073980 2 1 1 118 X 14782504 14789806 GATTGGAAGTATCGCACCC 58 14782404 14782424 TAGAGCATCGTATTTAGCACC 57 NA Drosophila melanogaster 61 CG9522 FBgn0030587 FBtr0073986 1 1 1 151 X 14742525 14742689 ATTCTTCAGCGATGTTCCC 57 14742392 14742411 CCTGATGCACTATGTTCTCC 58 NA Drosophila melanogaster 61 CG15890 FBgn0030576 FBtr0073939 3 1 1 85 X 14652485 14652504 TACATTGAGAGTCCTGCCAG 59 14652358 14652443 GGTACATCCATAGGAATATGAAGAC 58 NA Drosophila melanogaster 61 CG11063 FBgn0030530 FBtr0073834 1 1 1 80 X 13721665 13721683 GCAAGATCGAAGAGCTCAC 58 13721534 13721623 GACAAATGCCAAAGTATTCGC 58 NA Drosophila melanogaster 61 CG11151 FBgn0030519 FBtr0073819 3 1 1 116 X 13634045 13634065 GATCATCGATGGACTGAAGGA 59 13634143 13634726 TTCTTGCAGTCCAGAGTCC 59 NA Drosophila melanogaster 61 Lig4 FBgn0030506 FBtr0073847 1 1 1 80 X 13560304 13560326 AGAAGCAGGGATCAAGATATCAG 59 13560184 13560265 GCCCTTTGATGTAATCAGCC 59 NA Drosophila melanogaster 61 CG1824 FBgn0030403 FBtr0073658 3 1 1 138 X 12488017 12488036 TCTTCGAGTTCCTATCGCTG 59 12487635 12487916 TTGAGCACCAGATGATCGG 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301831,FBtr0073660 3 2 5 89 X 12483191 12483299 GCGCCTTATAGAATTGATGTG 57 12483122 12483141 GGACGAATCACTAACTGGTG 58 NA Drosophila melanogaster 61 Cpr11A FBgn0030394 FBtr0073650 3 1 1 133 X 12382066 12382359 CAAGCTGGAACTGAAGACC 58 12382456 12382474 TGTAACGGGTCTTGTACCG 59 NA Drosophila melanogaster 61 CG1840 FBgn0030351 FBtr0073571 3 1 1 196 X 11782681 11782758 CAAACAGTTGCTTGCATCG 58 11782918 11782936 TAGGCCTTAATCCACCTCC 58 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533 3 1 3 81 X 11572379 11572453 GATAAAGATCACGGAAAGAGCC 59 11572319 11572338 GAACAGAACCGTCGTAAAGG 59 NA Drosophila melanogaster 61 CG2247 FBgn0030320 FBtr0073536 2 1 1 80 X 11501982 11502059 CATGACGATGAAGGATCGTG 58 11501921 11501940 CGCCATACACTCTTATCCTG 58 NA Drosophila melanogaster 61 Spase25 FBgn0030306 FBtr0073506 1 1 1 72 X 11379411 11379430 GAGAGCAGATAGAAGATGGG 57 11379594 11379612 ACTTGTTGACCTTCACCAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0112813,FBtr0112812,FBtr0073490,FBtr0301289,FBtr0073486,FBtr0301288,FBtr0073489,FBtr0073488,FBtr0073485 2 10 15 89 X 11292685 11292765 TGGATAAGCAATCGACATTGG 58 11292815 11292834 CATTCTTCTCATCGCGACTC 58 NA Drosophila melanogaster 61 CG1908 FBgn0030274 FBtr0073440 3 1 1 196 X 11045980 11045999 AACTCGAAGAGGACGTACAC 59 11046158 11046286 TACATCGCTTCGGTTTCCA 59 NA Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 2 2 2 83 X 11040023 11040041 GTCGATATCAAGGATCGCA 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 CG15199 FBgn0030270 FBtr0073473 1 1 1 175 X 11035190 11035846 CAGAACTCATGACGAGAGCA 59 11035034 11035052 AAGCTAGGGACATCCAAGC 59 NA InUTR Drosophila melanogaster 61 CG11160 FBgn0030257 FBtr0073390,FBtr0073391 1 2 2 115 X 10943063 10943081 TTACTGCCACAGATGTCCC 59 10943160 10943233 ATGATGAGTCCTCGCAGAC 59 NA Drosophila melanogaster 61 CG15295 FBgn0030220 FBtr0071508 1 1 1 153 X 10512818 10512836 ATCTGAAGCGGAATCGGAG 59 10512560 10512581 GTTGTTCTTGTGATTGCTAGTG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG2898 FBgn0030195 FBtr0071445 3 1 1 60 X 10269618 10269637 CATCCGTCAACAGTCTACCA 59 10269660 10269678 CGTTATTACAGCACAGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 2 3 3 87 X 9955305 9955323 CAATGTGAGCATACCGTGC 59 9955171 9955255 ACGACCAGTCTGAACTATCG 59 NA Drosophila melanogaster 61 CG1986 FBgn0030162 FBtr0071395 3 1 1 83 X 9804445 9804524 AGTTATTGCTAACTTGGACCCT 59 9804383 9804401 TGTAGTCGTTCTGCGACAG 59 NA Drosophila melanogaster 61 CG3106 FBgn0030148 FBtr0071403 2 1 1 113 X 9556479 9556499 GATTCAAACCTACGAGGATCG 58 9555448 9556404 GTGTCGGGAAATTCCAGTG 58 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 1 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG15368 FBgn0030104 FBtr0071308 1 1 1 60 X 9110315 9110333 GCAATTTCGACTATCGCCA 58 9110357 9110375 ACAACGACGGGATTATCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dalao FBgn0030093 FBtr0071300 2 1 1 60 X 9043937 9043956 CCTATCAGGCCTACATGTCG 59 9043978 9043997 GTCTCATGCATATCCACGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dalao FBgn0030093 FBtr0071300 1 1 1 60 X 9043938 9043956 CTATCAGGCCTACATGTCG 57 9043980 9043998 TGTCTCATGCATATCCACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0301805,FBtr0071284 3 2 2 60 X 8975397 8975415 CGAATTCTCAGTGGAACGC 59 8975438 8975457 ATAGTATTCCGTTCGTCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP1b FBgn0030082 FBtr0301805,FBtr0071284 1 2 2 60 X 8975986 8976006 AATATAGATGGCGGTGACGAG 59 8976028 8976046 GATTGATGCTGCCAATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp36 FBgn0000359 FBtr0071203 1 1 1 62 X 8373394 8373412 AACTCGGTCTCTGGTTTGG 59 8373527 8373545 CATAGTTAGCGCTCACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 3 3 3 81 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333786 8333864 CATACTCCCGTAGCTTGCT 59 NA Drosophila melanogaster 61 mys FBgn0004657 FBtr0071105 3 1 1 118 X 7958771 7958789 CTATGTCTCGACCATTCCC 57 7959557 7961104 TCACCTCGTTAGAGAAGCT 57 NA Drosophila melanogaster 61 CG15330 FBgn0029987 FBtr0071099 2 1 1 60 X 7850577 7850595 CCACTACCATGAGACGGAC 59 7850618 7850637 CACCACAAGATTTGGTTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11369 FBgn0029951 FBtr0071067 2 1 1 60 X 7469071 7469089 GAAGAAGAGTTCCACCACC 57 7469112 7469131 ACCATTTAGACTACGACGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9657 FBgn0029950 FBtr0071057 3 1 1 84 X 7312984 7313818 CACTGATATCCAGCTTTATATCTGG 59 7313858 7313878 ATGTACATGTACTGAGCACCA 59 NA Drosophila melanogaster 61 CG15034 FBgn0029946 FBtr0071064 1 1 1 64 X 7241064 7241082 CGACCTTCAATTCAAGCTG 57 7241018 7241039 GTTTCTTCAGAAGACGAATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0300177 1 1 2 84 X 6745078 6745346 CTTTGTGCTCAGTTACAATTGG 58 6745391 6745409 AATTAGGCTGATGGACAGC 57 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 1 4 4 101 X 6636285 6637104 GTGTGCACTTCAAGAACAC 57 6636202 6636220 ACTCCTTCTGGTCGATGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pat1 FBgn0029878 FBtr0070945 1 1 1 115 X 6489267 6489357 TGATATAAGCCTGCGTCTG 57 6489433 6489454 GCGCATACTTCAAATACTTCTC 58 NA Drosophila melanogaster 61 CG15892 FBgn0029859 FBtr0070926,FBtr0070927 1 2 2 81 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187708 6187726 CTTGCGCTTCAGGAAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070874 3 1 2 94 X 6114442 6115423 ATTGCGAAGATATGGCTCTG 58 6115480 6115498 GATCAGCTCCAGAAAGACC 57 NA InUTR Drosophila melanogaster 61 CG12728 FBgn0029825 FBtr0070859 3 1 1 83 X 5837255 5837274 TGCTAGGGATTATCCATGCC 59 5837320 5837421 TTTCCACAGTCACTTTGCG 59 NA Drosophila melanogaster 61 Prosbeta2R1 FBgn0029812 FBtr0070816 1 1 1 112 X 5703261 5703279 TACAAGGACGGCGTTATCC 59 5703351 5703444 CCACAACAGTATATGTGATCCTG 59 NA Drosophila melanogaster 61 CG3556 FBgn0029708 FBtr0070674 2 1 1 82 X 4427223 4427305 CCTCGAGGGTATCACTACTG 58 4427350 4427368 GCAATAAGCTGATTCCCGG 59 NA Drosophila melanogaster 61 CG15576 FBgn0029700 FBtr0070661 1 1 1 60 X 4146580 4146598 AAGAGCGCAATATACAGCC 58 4146538 4146556 TGAATCGGTGGAATTTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14270 FBgn0029665 FBtr0070590 2 1 1 60 X 3378927 3378945 AAACTGCGTCTCCTTTCTC 57 3378885 3378904 CCTCGTCGTATAGATCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14269 FBgn0029658 FBtr0070532 3 1 1 60 X 3329189 3329209 ACTACTGGAAGGGATTAGGTG 58 3329149 3329169 AGTAGGACAAACATGGAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301059,FBtr0301058,FBtr0301061,FBtr0301060 1 4 4 80 X 2816307 2816325 TGAGTCCCTTGGAAAGACC 59 2816369 2816460 CTCCACCGAATTCTCCTCC 59 NA Drosophila melanogaster 61 CG14416 FBgn0040352 FBtr0070567 2 1 1 229 X 2766818 2766837 CTTATTCGCACTTCTCGTCG 59 2766553 2766571 TAGTTGTGGTCGATGGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 eIF2B-beta FBgn0024996 FBtr0070479 3 1 1 81 X 2598892 2598911 ATAACCAACAAGACGCTGGA 59 2598954 2599042 CAATCTGCATGAGAGCATCG 59 NA Drosophila melanogaster 61 per FBgn0003068 FBtr0070477 2 1 1 152 X 2586043 2586061 AATACACGGACAGCAATGG 58 2586177 2586253 ATGTGCTCATGCTCTTCAG 57 NA Drosophila melanogaster 61 CG14047 FBgn0040390 FBtr0300235,FBtr0301752 3 2 2 93 X 2268796 2268815 GATATCTACTCCACGTCGGA 58 2268542 2268740 TAGAGCGTACGGTGATCTG 58 NA Drosophila melanogaster 61 CG34052 FBgn0054052 FBtr0100107 1 1 1 63 X 2216173 2216191 ACAGTAAGGACTGCCTGTG 59 2216064 2216082 CAGGGCAGTTCCAATTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 crn FBgn0000377 FBtr0070418 3 1 1 205 X 2143910 2143928 ATTGCTAAGTGAGGGACCC 59 2143665 2143683 CTGATAGTCTGCCAACTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 2 1 1 105 X 1587254 1587272 TCACGTCTCGTGAGTTTCC 59 1587341 1587420 AAATCGAGTGTTGTCCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14770 FBgn0029573 FBtr0070213 1 1 1 220 X 1263400 1263656 AGTTGGCTATTACCTGCCT 58 1263840 1263858 GTAGTGGTGGAACTTGACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0070246,FBtr0301968,FBtr0070249 3 3 3 88 X 1117712 1117730 TATTTGGCCTCCAGTGTGG 59 1117574 1117661 ACATAGGGACTTCTCATGCC 59 NA Drosophila melanogaster 61 l(1)sc FBgn0002561 FBtr0070074 3 1 1 60 X 304164 304182 AACTGTGGTAAACTCGCTG 58 304204 304224 CACCTTGGATAACTTCTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972,FBtr0089971 2 2 2 84 4 653985 654003 TTCTCATACGGGCTTGGAC 59 654051 654127 TAAGCGCGTCCTTGTAGAC 59 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 1 3 3 80 4 499215 499234 TAACAAACTCCCAAGTAGCC 57 498700 499174 GCTTCGTATACTGTACATCCT 57 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723,FBtr0299722 3 2 2 91 4 282343 282415 AACACAACGTATTCGGAATCG 59 282468 282486 CGTACAACGTGTCTCTGTG 58 NA Drosophila melanogaster 61 mir-34 FBgn0064158 FBtr0082178 3 1 1 61 3R 5926683 5926701 GGTTAGCTGGTTGTGTAGC 58 5926726 5926744 GGCAGTGAAGATAGTGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr002:3R FBgn0063127 FBtr0091948 1 1 1 101 3R 2525626 2525747 ACGTAGAGATTTAACCCTTCTG 57 2525546 2525564 AATTGGGTGTTGATGTGGG 58 NA Drosophila melanogaster 61 RhoGAP100F FBgn0039883 FBtr0302179,FBtr0302181,FBtr0302180 3 3 3 82 3R 27661189 27661274 CACTGAGAAATACGGAAAGCA 58 27661318 27661336 GGTAAGACCCATGTTCCGA 59 NA Drosophila melanogaster 61 CG11563 FBgn0039868 FBtr0085831 3 1 1 98 3R 27563234 27563252 AAACCAGTCGTAGAGGAGG 58 27563312 27563390 CTTGGGTAATCTGAACTCTGG 58 NA Drosophila melanogaster 61 CG1774 FBgn0039856 FBtr0085798 1 1 1 67 3R 27419012 27419030 CTCTGGAACGATGGTGGAG 59 27419118 27419136 TATGGTATCCCACGTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG18673 FBgn0040629 FBtr0113330 1 1 1 80 3R 27088761 27088782 GCGTTTCAACAACTATGATCAG 58 27088823 27088897 GGTATCACCATGTTGGCTG 58 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 1 2 2 80 3R 26925152 26925171 TCTTTCGTTCCATTCAGGGT 59 26925032 26925111 CAAACAGCTTACCAGTGTCAG 59 NA Drosophila melanogaster 61 hdc FBgn0010113 FBtr0085620,FBtr0085621,FBtr0085619 1 3 3 80 3R 26184097 26184115 CTATCCACTGGTTGATGGC 58 26184158 26185711 CGTCCCTCGTATTTAACCTC 57 NA Drosophila melanogaster 61 CG7912 FBgn0039736 FBtr0085605 1 1 1 91 3R 25833316 25833336 ACTTCTTCGGTCACATAACAC 58 25833171 25833263 TTTCAGTTGCCTCATGAGC 58 NA Drosophila melanogaster 61 Ice FBgn0019972 FBtr0085482 3 1 1 60 3R 25626129 25626148 CGAGATGGGCTACATCTACG 59 25626169 25626189 GAAGCTCCAGATGTTATCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475 3 1 2 135 3R 25566131 25566297 TGCAACTTACGGAGGAGAC 59 25566396 25566414 AGAGGACGCACTTTCATCC 59 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 1 2 2 80 3R 24989870 24989951 AACGTTGATCCAGAAACCG 58 24989992 24990013 GGCTATAGTCAATACAGTGCAG 58 NA Drosophila melanogaster 61 Cpr97Ea FBgn0039480 FBtr0085136 2 1 1 80 3R 22909613 22909695 AACCCTATCGTGTTCAACGT 59 22909552 22909571 CGTATTGCACATACTGTGGC 59 NA Drosophila melanogaster 61 TwdlC FBgn0039469 FBtr0085075 1 1 1 179 3R 22820778 22821011 TTTGCCACTCAATGCTCAC 59 22821154 22821172 TCATCGTAGGCATTCAGGG 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 1 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809929 22810007 TTAAAGATTTGGCTCTCGCTC 58 NA Drosophila melanogaster 61 beat-VII FBgn0250908 FBtr0290328 1 1 1 103 3R 22492578 22492596 CTGGTGAATCTAGTGGTGC 57 22489408 22492512 AGCCATGTAACCTTGAACAG 58 NA Drosophila melanogaster 61 TwdlM FBgn0039434 FBtr0085029 2 1 1 60 3R 22444893 22444990 GTGCCTTCATTGTTATGTGCT 59 22445010 22445030 TAGTTGTAGCCGAGCTTATCG 59 NA DesignRelaxed Drosophila melanogaster 61 Hex-t1 FBgn0042711 FBtr0085010 3 1 1 60 3R 22275552 22275571 GCTGTTATGTGGAAAGGGTC 59 22275592 22275612 AGCTTTCTGTACTCATCACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lnk FBgn0028717 FBtr0084937,FBtr0084935,FBtr0084936 3 3 3 96 3R 21717671 21717689 ATGGTCAGGGTTCATCGAC 59 21717749 21718181 ACTTCGTTGCAATGTCTCG 58 NA Drosophila melanogaster 61 CG14545 FBgn0040602 FBtr0084913 2 1 1 188 3R 21676845 21676863 TTTCCCTCGACTTCTGGAG 58 21676606 21676625 AAATCGATGATCAAACGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5116 FBgn0039339 FBtr0084877 3 1 1 107 3R 21309422 21309440 GAAGCCCAAATTCAGGCAG 59 21309511 21309583 GTCGTAGGCTCGATCATCC 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 1 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 RabX4 FBgn0051118 FBtr0084736 3 1 1 113 3R 20653339 20653571 CATCTCTACGATAGGCATTGAC 58 20653247 20653267 GTGGTCAATGTTCGGAATCTC 59 NA Drosophila melanogaster 61 CG31126 FBgn0051126 FBtr0084663 3 1 1 114 3R 20485574 20485592 GGTCATTAACGAATCGCCC 59 20485668 20485744 CAATCGATGACGCTTGATGAG 59 NA Drosophila melanogaster 61 CG6607 FBgn0039204 FBtr0084644 1 1 1 125 3R 20354395 20354479 CTGACGTCATTGATTGACGAC 59 20354566 20354584 CTTCCTGAGTCGCTTCTCC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 6 6 80 3R 20025043 20025061 AAGACTATGTCCGAGCTGG 58 20024920 20025001 CTTGATCAGCGTAAACTTGGA 58 NA Drosophila melanogaster 61 Npc2f FBgn0039154 FBtr0084548 1 1 1 80 3R 19963852 19963872 GATCAAGTCTACCAGAGATGC 58 19963913 19965510 TACAAAGAACCGCAATCCTC 58 NA Drosophila melanogaster 61 CG31141 FBgn0051141 FBtr0084490 1 1 1 92 3R 19749234 19749255 TCGAGAACCTTATAATCTGCGA 59 19749308 19749385 AAGTAGTATCCGGGCAGGA 59 NA Drosophila melanogaster 61 CG10214 FBgn0039115 FBtr0084463 1 1 1 60 3R 19592785 19592803 GAGCTCGGATGTGAATCTC 57 19592743 19592765 GTTCTTCTCGAGATAGGATAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0300968,FBtr0084368,FBtr0084369 3 3 3 143 3R 18947659 18947745 CCGACCAAATCTCACATCC 58 18947852 18947870 ATTATTGGGTGCGTTCGTC 58 NA Drosophila melanogaster 61 CG17110 FBgn0039050 FBtr0084350 2 1 1 98 3R 18920427 18920445 GGATTTCACGCTGAAGTGC 59 18920502 18920580 ATCAAACCTAGTTCATCTAGTCCC 59 NA Drosophila melanogaster 61 CG6660 FBgn0039030 FBtr0084338 3 1 1 98 3R 18749490 18749508 GATCACACGGACAGATCAC 58 18749569 18749650 TATGAATACCGTGTCGAGCA 59 NA Drosophila melanogaster 61 CG7054 FBgn0038972 FBtr0084254 2 1 1 101 3R 18291389 18291469 ATCCAATACTACTCGCACAG 57 18291533 18291551 TGGGCCTGGTAATAATTGG 57 NA Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 1 2 2 80 3R 18274274 18274292 TAGTGCTGGCTATCTGCAG 59 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 2 2 2 60 3R 17840975 17840995 CAGCTATCTATCGCTGTACAG 57 17841016 17841108 TTTCTTCGGCTTAACCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407,FBtr0100089 1 2 2 82 3R 17564657 17564739 GTCCAGTCTTTGGAAATTGCA 59 17564595 17564613 AGGATAGCCACAACGTGAG 59 NA Drosophila melanogaster 61 CG6353 FBgn0038893 FBtr0084116 1 1 1 80 3R 17488460 17488546 AGATGAAGTACGAGTACCTGG 58 17487901 17487919 GTTCGAACGCCTCTTTCAG 59 NA Drosophila melanogaster 61 CheB93a FBgn0038888 FBtr0084089 3 1 1 113 3R 17233328 17233349 TGGATTTATCCAACTTCAGTCG 58 17233422 17233500 TGCTAACATCAATCTCGACG 58 NA Drosophila melanogaster 61 sec15 FBgn0038856 FBtr0084034 1 1 1 83 3R 16933592 16933610 CAAAGTGACCGTGCAAGAC 59 16933463 16933547 TTAGTGTTGTTGCCTTCAAGG 59 NA Drosophila melanogaster 61 RhoGAP93B FBgn0038853 FBtr0084036 1 1 1 80 3R 16913651 16913669 AGGACATCCGGATAACCTG 58 16913486 16913608 ATCTCGAAAGCTCCATTGTC 58 NA Drosophila melanogaster 61 AnnIX FBgn0000083 FBtr0089517,FBtr0089520,FBtr0089518,FBtr0089519 2 4 4 206 3R 16893214 16893801 CATTCAAGTGCACACCCAC 59 16893971 16893989 ACTTGAGGTCCGAGATCAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG17279 FBgn0038850 FBtr0300816 1 1 1 82 3R 16876550 16876629 AAGTTTGGGACAGTTGCCT 59 16876486 16876505 GAATCCTGGTGACTGTTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Dhc93AB FBgn0013812 FBtr0273236 2 1 1 80 3R 16857569 16857592 GTCATCGTATAATGATCTAGTCGC 59 16857452 16857531 CGATTGATCCTGCATACGTG 59 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 3 2 2 80 3R 16727883 16727901 GGCTTCATCCTAACGAGCT 59 16727944 16728163 GTTCTCATAGACGAGACCCA 58 NA Drosophila melanogaster 61 Cpr92F FBgn0038819 FBtr0083919 2 1 1 195 3R 16495455 16496867 GAAGCCATTCTTTATTGCCG 57 16497025 16497043 ATCCACGTAGGAGTAGGAG 57 NA Drosophila melanogaster 61 CG5412 FBgn0038806 FBtr0083909 1 1 1 128 3R 16403301 16403379 AAAGAAGTTGACCTCCATCC 57 16403470 16403488 GTCTGTCCGTAGATGTGCA 59 NA DesignRelaxed Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 1 2 2 81 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401270 16401288 TAAGATTTCCGTGACGCAC 58 NA Drosophila melanogaster 61 Or92a FBgn0038798 FBtr0083887 1 1 1 95 3R 16331619 16331705 TGATATCTTCAAGCTCTCGGA 58 16331759 16331780 CGATAATAAATTGCAGGATGCG 58 NA Drosophila melanogaster 61 CG4367 FBgn0038783 FBtr0083901 1 1 1 110 3R 16130510 16130528 TGCATTATATTGCGGTGGA 57 16130357 16130375 TTTCCACCCAACTCATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4770 FBgn0038751 FBtr0083822 3 1 1 80 3R 15744674 15744694 TAAATGAGTCCGACAGATCGG 59 15744733 15744816 ACTCATTGAATCGTACTGTTGC 59 NA Drosophila melanogaster 61 CG7208 FBgn0038575 FBtr0083618 2 1 2 61 3R 14010862 14010995 AAACACAAGTGTGATGCCG 59 14010819 14010837 TCAATTCACCAATGGTCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG7713 FBgn0038545 FBtr0083513 1 1 1 80 3R 13621346 13621427 ACGGTATTAAGATCAGCACTC 57 13621467 13621487 AGCTAAACTGGAAGAGAATGG 57 NA Drosophila melanogaster 61 Fsh FBgn0016650 FBtr0083510,FBtr0083509 1 2 2 80 3R 13555397 13555892 CACCGTGGACATTATACGA 57 13555934 13555954 AGAATATTATGAGGTGGCAGG 57 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443,FBtr0113398 1 4 4 80 3R 13316122 13317466 CCCATTTCCCATATTTACCTGG 59 13316063 13316081 AGTATCACTCGCTGTGACG 59 NA Drosophila melanogaster 61 CG5866 FBgn0038508 FBtr0083440 1 1 1 60 3R 13241767 13241787 TGAATCGCATGATCCTATCCA 59 13241804 13241827 GTTAGGATGTGAACCATGATAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sur-8 FBgn0038504 FBtr0083447,FBtr0083448 3 2 2 103 3R 13224494 13224750 CGTGATGAAGGCATCAAGC 59 13224409 13224431 CTGTACAGATAAAGTTCCGTGAG 59 NA Drosophila melanogaster 61 CG31265 FBgn0051265 FBtr0083402 3 1 1 60 3R 12954316 12954335 CAGCCTTACATGCATAACGA 58 12954356 12954376 CATTGAAGGTGATGTTCTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5225 FBgn0038468 FBtr0083389 2 1 1 85 3R 12855114 12855132 AAGGGATCCAAAGGTCCAC 59 12855293 12855311 GGATACGTAGTGCCTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3590 FBgn0038467 FBtr0083373 1 1 1 60 3R 12845703 12845721 GAGGTTGACCCTATCCGAG 59 12845661 12845679 GTTCAGCAGAGTAAGCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pxd FBgn0004577 FBtr0301526,FBtr0089287 3 2 2 80 3R 12852794 12852812 GATTCCCTGACCAGAGGAC 59 12852855 12852935 CAGGAAGTGCTTGATCTGTC 58 NA Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 3 2 2 82 3R 12805119 12805209 ATCCTGGACAGTCTGAAACG 59 12805056 12805074 TTTCCCACATCACCGTACC 59 NA Drosophila melanogaster 61 Mst89B FBgn0020399 FBtr0083260 1 1 1 85 3R 12092876 12092957 CTGTTCACATTCCCATAATGGT 58 12093003 12093021 TATCACTCGCGTGTCTTCC 59 NA Drosophila melanogaster 61 CG31150 FBgn0051150 FBtr0083189 3 1 1 80 3R 11674488 11674506 AAGTTCCATACACCTGGGC 59 11674368 11674446 AAGTTACCTTCGATCCTGGTG 59 NA Drosophila melanogaster 61 CG6218 FBgn0038321 FBtr0083119 1 1 1 113 3R 11165160 11165178 ATTTCAGGAACCGGATCCA 58 11164873 11165083 ATACGAGATGTACCAGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6623 FBgn0038303 FBtr0083138 3 1 1 82 3R 11041107 11041127 TACACGGATCTCATGTACGAG 59 11040797 11041063 TTCATGGATACGACACCCG 59 NA Drosophila melanogaster 61 CG6934 FBgn0038289 FBtr0083039 3 1 1 72 3R 10937904 10957341 TTGTTGTGAGAGCGAATGTG 59 10937851 10937873 TAGCGGATAGACATCACTATTCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG3509 FBgn0038252 FBtr0082969 1 1 1 73 3R 10489974 10489993 AATCCAGTAAACCAACCGAG 57 10490123 10490141 ATCCTTGGTTCCATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 soti FBgn0038225 FBtr0082940 3 1 1 60 3R 10206878 10206899 GCGAGTACTTTGCAAATTACCT 59 10206839 10206860 ATACCATTCGGGTAGTTCTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 2 8 8 82 3R 9487884 9487905 AATTCGAAGACTATCGTGATGC 59 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 CG9796 FBgn0038149 FBtr0082760 1 1 1 80 3R 9224682 9224806 CTGTTCAATGAGCAATTCGAC 58 9224622 9224641 GGATACGTATTGGCAGATGG 58 NA Drosophila melanogaster 61 CG8141 FBgn0038125 FBtr0082734 2 1 1 60 3R 9017478 9017498 AAGTTCCAGCGAATGAAACTG 59 9017518 9017587 GAAATCACCTCACCTTGAAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0113229 2 2 3 143 3R 8855867 8855952 TTGCAGAGATTCTTCGCCA 59 8855742 8855760 GATTCAAACGACGTGGAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12279 FBgn0038080 FBtr0082656 2 1 1 81 3R 8530988 8531070 AGCATAAACATTCCACTGAGC 59 8531113 8531131 TGACGCGTCCATAAGTCTG 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0113226,FBtr0113228 1 3 6 131 3R 8521014 8521032 GATCCAAAGTGCAGTGGTG 59 8521126 8521861 GCATCCATTGCCTTCATCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18616 FBgn0260444 FBtr0082643 1 1 1 83 3R 8457884 8457960 AACAAAGCCATACGCTCCT 59 8458007 8458025 GTTAACGCGCTACGTAGAC 58 NA Drosophila melanogaster 61 CG17404 FBgn0038001 FBtr0302311 3 1 1 157 3R 8050583 8050665 ACTGAATTCTCGTCAACCCA 59 8050445 8050463 GATTGGGAGCGATGATGGA 59 NA Drosophila melanogaster 61 CG42327 FBgn0259227 FBtr0299789 1 1 1 148 3R 7497205 7498299 AATGCCAATTATGTGCGGG 59 7498411 7498429 TTCTCACTGAGATCCGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Rbp1 FBgn0260944 FBtr0082277 2 1 4 91 3R 6610564 6610582 TAGAGATGTCTTCGGGTCG 58 6610637 6611134 AGGAGTTATCCTGTAGCGT 57 NA Drosophila melanogaster 61 CG31278 FBgn0051278 FBtr0082319 2 1 1 81 3R 6533639 6533657 GAGTTCAAGGGACGGATCC 59 6533505 6533595 AAATAGTCAGTGGCAACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31467 FBgn0051467 FBtr0082320 3 1 1 60 3R 6532249 6532267 CAGGAGTATGTGCTACCGA 58 6532207 6532228 TTCTAATATCTCCGACCACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31391 FBgn0051391 FBtr0082321 1 1 1 60 3R 6529749 6529767 GCTCCGCTTGATTGATCTG 59 6529707 6529727 GGTGTTGTAGAGATTCTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 2 4 4 85 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525809 6525956 CGTTCAGATCGTTTATCTTATCGAG 59 NA Drosophila melanogaster 61 CG3940 FBgn0037788 FBtr0082179 3 1 1 117 3R 5938527 5943342 CCTTAATAGTCTGCTGCTCTG 58 5944024 5944042 TTTCCGCTATCGCAAAGAC 58 NA Drosophila melanogaster 61 Npc2e FBgn0051410 FBtr0273369 2 1 1 60 3R 5879543 5879562 CGTTGTGTACAAAGGAACCA 58 5879584 5879661 ATTGTTGTTATTGCCCAGGA 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 eloF FBgn0037762 FBtr0082144 1 1 1 173 3R 5639950 5639968 CATGGATAACCATGGGCAC 58 5640104 5640188 CAAACAGGAAGTGAACTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 MtnA FBgn0002868 FBtr0082158 3 1 1 290 3R 5610045 5610064 AAGTGAATCATCTCAGTGCA 57 5609510 5609529 GACATTTATTGCAGGGTGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12947 FBgn0037753 FBtr0113213,FBtr0113212 1 2 2 121 3R 5606177 5606195 CTTCATCCACCTCAACCAC 58 5607459 5607477 GAAACTCCAGAAGTTCCGA 57 NA DesignNoJunction Drosophila melanogaster 61 SpdS FBgn0037723 FBtr0082079 3 1 2 85 3R 5458015 5458110 TCTTTCAGCGAAACCTATGG 58 5458157 5458176 ATCTCCTGGTACGAGAACTC 58 NA InUTR Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 2 2 2 100 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226567 5226585 CTGGTAAACCAGACGACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091945,FBtr0091944 1 2 4 105 3R 5182881 5182900 ATAGTAGGGCTGGCTTAGAG 58 5183728 5183746 CTGTTGACTTTGGCAGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 2 2 2 81 3R 4761392 4761661 GAGCATCAAGAGTGAATATCGA 58 4761703 4761721 AATGGTCAGCAGGAAATCC 57 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876,FBtr0301878,FBtr0302326 1 4 4 99 3R 4611724 4612255 ATTTGGCAAACACTGCAGG 59 4611643 4611661 GTTTCATCAGCTGCACCTC 59 NA Nonspecific Drosophila melanogaster 61 CG9793 FBgn0037620 FBtr0081948 3 1 1 87 3R 4555195 4555273 CTGGAGCTGTGTTAAAGAACTG 59 4555129 4555150 CTAAAGGATATGGCTTGTTGCA 59 NA Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 3 2 2 61 3R 4476034 4476213 TTTGTTTGCAACCGGATCC 59 4475991 4476013 GATTATTCAGGCTTAGCTGATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31259 FBgn0051259 FBtr0081871 3 1 1 113 3R 4350191 4350211 TATGAGTATCACCATCCGTGG 59 4350283 4350491 TAGAGCAAACACGTATACAGTG 58 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 3 3 3 111 3R 4184770 4184788 AGTGTACCACGGCTATCAC 59 4184860 4184937 CAGTTCGTTCATATCGTTAGCA 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 1 3 3 92 3R 4184860 4184937 TGCTAACGATATGAACGAACTG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 CG9626 FBgn0037565 FBtr0081864 1 1 1 80 3R 4123027 4123106 CGAGAAAGAGAAATTGTCCCG 59 4122967 4122985 CCATCCGAAGTCTTGACCT 59 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 2 2 2 84 3R 3833666 3833686 GTCAACACCAAGTTCTTAACG 57 3833219 3833620 TTTCCTCATCAGATGCCTG 57 NA Drosophila melanogaster 61 Sfp84E FBgn0259974 FBtr0300322 2 1 1 88 3R 3805950 3806021 ATTAAGATGCGTCACTTTACCG 59 3805883 3805901 TTGAGAGCTGTCCTGTGAG 59 NA InUTR Drosophila melanogaster 61 CG2846 FBgn0014930 FBtr0081763 2 1 1 92 3R 3738576 3738658 CCCAACAGCTAACTTTCCG 58 3738502 3738520 CCATTATCCACGTTTGCCC 59 NA Drosophila melanogaster 61 CG2993 FBgn0037521 FBtr0081771 1 1 1 80 3R 3633749 3633767 CACCCGAAGGTCTTTAAGC 58 3633481 3633707 CAGAGGAACCCTGTAAATTGC 59 NA Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539,FBtr0081538 2 2 2 60 3R 3358153 3358171 GGACCACAAGTTCGATCTG 58 3358194 3358213 CTCACCAACATACCAGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt4 FBgn0028400 FBtr0081578 3 1 1 199 3R 3092606 3093397 TCATGGACACGATTGTCCC 59 3093560 3093578 CTTCTTCAAGTAGTGCGGC 58 NA DesignRelaxed Drosophila melanogaster 61 Sas-4 FBgn0011020 FBtr0081569 3 1 1 155 3R 2978966 2979035 CCCAAAGTGTTACCTTCCG 58 2979154 2979172 ACTCCGACTTCTCACTTGG 59 NA Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 3 2 2 93 3R 2897573 2897646 GGTATCACGATTTGGTCCTG 58 2897499 2897517 TGATTCTGCATTGTCTGCA 57 NA Drosophila melanogaster 61 CG1979 FBgn0026563 FBtr0081628 1 1 1 80 3R 2883463 2883481 AAGACGATGATGACTGCGA 59 2883520 2884149 GAATTATAGAGAACGAGAGCTGAC 59 NA Drosophila melanogaster 61 sowi FBgn0037460 FBtr0081701 1 1 1 80 3R 2452859 2452968 ATGAACTTAAGGCGGATATGAC 58 2452800 2452820 AGTCCTCGTAGGAAATGACTC 59 NA Drosophila melanogaster 61 Osi6 FBgn0027527 FBtr0078596 3 1 1 133 3R 2060579 2060597 CAGGTATCTCTGCCGATCC 59 2061322 2061340 AGGGTTATCGAACACGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14676 FBgn0037388 FBtr0078645 1 1 1 60 3R 1673645 1673666 ACAATCTAACCACCTACTACGA 58 1673686 1673705 CCATCCTTGGCCTTTATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12162 FBgn0037329 FBtr0078680 3 1 2 164 3R 1293861 1293932 TATCCGACCAAACTGGCTG 59 1294060 1294078 AATCTTGCCAGGATTGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG12589 FBgn0040684 FBtr0078843 3 1 1 63 3R 963159 963177 TCGCAGGCATAGATATGGA 58 963114 963132 TTCTCCAATTCTCCGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12589 FBgn0040684 FBtr0078843 1 1 1 62 3R 963159 963177 TCGCAGGCATAGATATGGA 58 963115 963133 TCTCCAATTCTCCGTGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1126 FBgn0037280 FBtr0078872 1 1 1 82 3R 642542 642560 TTTCACCGACGTATCTGGG 59 642602 642684 GCTGATAAAGGTGATATACGTCG 59 NA Drosophila melanogaster 61 pncr014:3L FBgn0046272 FBtr0091955 1 1 1 209 3L 14028016 14028034 GCTTAAGCATTGCTTGGAC 57 14027825 14027844 ACTATTGCAATCTGCTTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41452 FBgn0084015 FBtr0111175 3 1 1 136 3L 23019162 23019180 CTCGGGATAGTCAACGGAG 59 23019278 23019418 TTTGTAGGTTACACTTCCGCT 59 NA Drosophila melanogaster 61 CG11367 FBgn0037185 FBtr0078528 1 1 1 80 3L 22725176 22725196 TTCGAGTCGTTCTCTTTACCC 59 22725236 22725696 TGTTGATGGAACTGATTCCGA 59 NA Drosophila melanogaster 61 CG14451 FBgn0037183 FBtr0078538 2 1 1 60 3L 22714632 22714652 CAGAAGGATATAAGGGACACG 57 22714592 22714612 GATGGGTGTCAACATATTCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493,FBtr0078494 2 3 3 87 3L 22262582 22262685 GGCTGATAAGTTCAAGGAAGTC 59 22262733 22262751 CAAAGAGCCGTAGTTGTCG 59 NA Drosophila melanogaster 61 CG7458 FBgn0037144 FBtr0078475 1 1 1 80 3L 21948945 21949485 ACCATATCAACGGAGTTTGGA 59 21949524 21949545 TTGGCCCACATTGTTTATAGTG 59 NA Drosophila melanogaster 61 Atox1 FBgn0052446 FBtr0078426 2 1 1 79 3L 21634397 21634415 TCAAGGTGGAGATGACCTG 58 21634458 21635087 TTTCTCGACCTTATCGCCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 1 3 3 115 3L 21429092 21429173 ATGTGAAGATCCACACGGG 59 21429250 21429270 GTAGACTTTGTCCATGACGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Spc105R FBgn0037025 FBtr0078255 2 1 1 80 3L 20798946 20799029 GAAATGTGCAAGCTAAGAACAG 58 20799069 20799088 TAGCAAACGTTTGAGTCTCG 58 NA Drosophila melanogaster 61 CG5104 FBgn0037009 FBtr0078209 3 1 1 147 3L 20514553 20514571 CAAGGGATTCGTCATCTGC 58 20514681 20514775 CATGAGAAAGCAGGTACTGG 58 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078202,FBtr0078203 3 3 5 158 3L 20505476 20505629 CAAGGGAAAGCTACCAGTG 58 20505751 20505769 TTGTTGTCATGGTCGAAGC 58 NA Drosophila melanogaster 61 Rab8 FBgn0015796 FBtr0074921 2 1 1 88 3L 19862399 19862477 TGCAGATATGGGACACTGC 59 19862329 19862348 ATATACCAGCATGATGCCCA 59 NA Drosophila melanogaster 61 asf1 FBgn0029094 FBtr0074947,FBtr0302381 3 2 2 60 3L 19612347 19612365 GTTCGAACTCACGTTCGAG 59 19612385 19612407 GATCATCTTCCACTCTAGATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32212 FBgn0052212 FBtr0074932 2 1 1 100 3L 19481055 19481132 TGTTCAAATACGCCGTCCT 59 19481196 19481214 GTAAGCCAGAGGACCAGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Aut1 FBgn0036813 FBtr0075055 3 1 1 96 3L 18742831 18742906 AGACAAAGGAAGAAATGCACAC 59 18742963 18742981 ATGTCAATAGCCTCGTCGT 58 NA Drosophila melanogaster 61 AlCR2 FBgn0036789 FBtr0100242,FBtr0089387 2 2 2 94 3L 18480883 18480901 TCAGGAAACTTCACACCGT 59 18480594 18480825 ACTTATGACCGTGAGCACC 59 NA Drosophila melanogaster 61 grim FBgn0015946 FBtr0075130 3 1 1 61 3L 18296944 18296962 ATGTCGGAGTTTGGATGCT 59 18296901 18296919 TAGATTCGCAGAGCGTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grd FBgn0001134 FBtr0075139 1 1 1 83 3L 17830735 17830852 ATCATCCGTCGGAGTACTC 58 17830899 17830917 GACCGTACACCTGAATCAG 57 NA Drosophila melanogaster 61 Msi FBgn0043025 FBtr0075192,FBtr0110847,FBtr0110846 2 3 3 137 3L 17748903 17749051 TGCCAAATATGTACGATCTGG 58 17748786 17748807 TCCTAGAAGGAGCATAGATCAG 58 NA Drosophila melanogaster 61 CG32185 FBgn0052185 FBtr0075174 2 1 1 60 3L 17488011 17488029 TACTGATCCTCGTGTCCTG 58 17488051 17488071 GGATATGGTTGACGATAGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7630 FBgn0040793 FBtr0075217 3 1 1 139 3L 17419056 17419074 CTCCACCATGAACGATCTG 58 17419174 17419254 TACCAGAAGATTTCACGAATCC 58 NA Drosophila melanogaster 61 CG7707 FBgn0036703 FBtr0075212 1 1 1 81 3L 17237137 17237218 GCCTATTGCGACAATTTCGA 59 17237262 17237280 CTCAATTCGACCTCCACGT 59 NA Drosophila melanogaster 61 Dbp73D FBgn0004556 FBtr0075347 2 1 1 131 3L 16723746 16723821 CTGTTAACAGATATACCGAGGA 57 16723636 16723656 CTTCTATGGCTTCATGTTTCC 57 NA Drosophila melanogaster 61 CG4101 FBgn0025558 FBtr0075314 1 1 1 60 3L 16605765 16605783 GCTTTATGTGGGTGCTCTC 58 16605806 16605825 ATTCTCCATCAATACTGCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32165 FBgn0042178 FBtr0075312 1 1 1 123 3L 16590024 16590042 TTGTAGGCAGCCTAGTTCG 59 16590127 16590203 TAATCATCGTCACCTTCCTCG 59 NA Drosophila melanogaster 61 Cpr72Ea FBgn0036617 FBtr0075382 1 1 1 60 3L 16355906 16355925 TATTCGGAACCATTGTCCAG 57 16355948 16355966 ATCCTTGGGTGATTCCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33257 FBgn0053257 FBtr0075378 2 1 1 93 3L 16339424 16339442 TGTACGGCCAAGGATTACG 59 16339804 16339822 TAGCCATTCCTCTTGTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13056 FBgn0040794 FBtr0075376 1 1 1 163 3L 16326441 16326533 CAGAGAATGTACTTATCCTTTGCTC 59 16326654 16326672 GAACTCTGGTGCGAAACTG 59 NA Drosophila melanogaster 61 Taspase1 FBgn0036564 FBtr0075498 1 1 1 191 3L 16079614 16079632 TTCACAAGACGTTCAAGCA 57 16079371 16079459 AATGCACAAACTTTGGCAC 58 NA Drosophila melanogaster 61 elgi FBgn0036546 FBtr0075510 3 1 1 80 3L 15950100 15950119 TCGAAATTCCCTGACTACTG 57 15950162 15950253 CAGGTGATTGACAGTCTGG 57 NA Drosophila melanogaster 61 CG7841 FBgn0036502 FBtr0075604 1 1 1 124 3L 15499236 15499335 TAAATGACTCCTGGAACATGCT 59 15499133 15499152 TATGCTTTCCACTGGACTGG 59 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 1 4 4 106 3L 15486641 15486659 TTTCCTGGCACCACTAAGG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG17173 FBgn0036447 FBtr0075701 1 1 1 60 3L 14762285 14762305 CTCTGTTGTATTTCGGAATGG 57 14762245 14762264 TTCACTACTCTTGGTTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Leucokinin FBgn0028418 FBtr0075722 3 1 1 85 3L 14553542 14553560 GAGATCTGGGCCTTCTTCC 59 14553475 14553493 CTTTCAATCACCGCATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9007 FBgn0036398 FBtr0075768 3 1 1 101 3L 14002803 14003134 TTACAATAAGCACGGCGTG 58 14003199 14003217 CTTCCACTGTTACTTCGCG 59 NA Drosophila melanogaster 61 CG32132 FBgn0052132 FBtr0075800 3 1 1 60 3L 13865643 13865661 CAACAGCCAGTATGGTAGC 58 13865601 13865619 ATGCGTATGCTGATGAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8757 FBgn0036380 FBtr0075803 1 1 1 112 3L 13834805 13834826 TTCCCTCGCTAAACATTTATCC 58 13834622 13834732 ACTGACTGTCGAAACCCTC 59 NA Drosophila melanogaster 61 Vps36 FBgn0086785 FBtr0075818 1 1 1 130 3L 13505342 13505361 AATCCTACCTCATGAGCCTG 59 13505173 13505249 ACCTTGCTCCTCGATAGGA 59 NA Drosophila melanogaster 61 CG10713 FBgn0036360 FBtr0075855 2 1 1 102 3L 13427912 13427930 ACATCAACGTGCCAATAGG 58 13424050 13427846 AAATGTAAGTTGCGCTGCA 59 NA InUTR Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075843 2 1 3 60 3L 13375928 13375946 CATCGTAGGTAAGTCTCGC 57 13375966 13375988 CCAGTTAATTATGGGACTTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS12 FBgn0260441 FBtr0075878 1 1 1 198 3L 13016618 13016844 GTTGATGTTGATGTTCCCTCC 59 13017507 13017525 TCTTGTAGTTGGGCTCGTC 59 NA Drosophila melanogaster 61 Ent3 FBgn0036319 FBtr0075935 2 1 1 115 3L 12848011 12848032 CTACATACTCTTCAGCTACCTG 57 12848107 12848300 CATCAATCTCCTGCTCATCC 58 NA Drosophila melanogaster 61 CG10984 FBgn0036305 FBtr0075920,FBtr0075919 1 2 3 90 3L 12743758 12743777 CCCAGATCGAACTCAAACAC 59 12743830 12744415 GGGATGAATCTGTCGACGA 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 2 4 4 80 3L 12558130 12564649 AGCCAGAGAAGCAATTAATCG 58 12558070 12558089 AGACTATCCACTCCTTTGCC 59 NA Drosophila melanogaster 61 CG32100 FBgn0052100 FBtr0076006 2 1 1 105 3L 12260742 12260868 CTGGATGAGGTCAAAGACAC 58 12260936 12260954 TGTTCGCTATGACCTCCAG 59 NA Drosophila melanogaster 61 CG6168 FBgn0036154 FBtr0076182 3 1 1 60 3L 11314259 11314277 CTTCTTCGACGGTGAGGAG 59 11314217 11314235 GGAACCATATGGCGAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nol FBgn0014368 FBtr0076214 2 1 1 86 3L 11123986 11124005 TTATTCTCTTCGCCATCGTG 58 11124054 11124072 GAGTAGTCGGATCAGTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42575 FBgn0260795 FBtr0301438 2 1 1 89 3L 11126617 11126635 CATCTCTGTGGGTCTCTGG 59 11126687 11126775 GTAAAGCCAGTCGATGAGGT 59 NA Drosophila melanogaster 61 Cpr67Fa1 FBgn0036108 FBtr0076191 3 1 1 193 3L 10883145 10883320 AAAGATGTTCCGCTACCTG 57 10883477 10883495 CGTGGTTTCCTCCAATTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7949 FBgn0036107 FBtr0076270 2 1 1 98 3L 10876112 10876131 AGGAAAGGGTATTAACCGCC 59 10876241 10876265 CCGGGTCATTAATATTTCTGATGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8003 FBgn0036096 FBtr0076260 2 1 1 105 3L 10655709 10655787 ATGAGGTGGATTACGGACG 59 10655856 10655874 ATTCGCGATCGCAATACTG 58 NA Drosophila melanogaster 61 CG14153 FBgn0036094 FBtr0076259 1 1 1 62 3L 10636641 10636659 AAATGAAGCCGCAAACAGG 59 10636685 10636769 TAAGTGCACATAGCCAGCT 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG32054 FBgn0052054 FBtr0076314 3 1 1 134 3L 10087064 10087154 CCAAGAAGTATGTCTTGATCTTCAG 59 10086954 10086972 CAAACACCAGTCCATTGGC 59 NA Drosophila melanogaster 61 ATPsyn-b FBgn0019644 FBtr0076406,FBtr0076405 2 2 2 97 3L 9723646 9723664 AGTACTACAGCGGTCTGTC 58 9723724 9723835 TTTATCGATCTCGCCATCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076397 1 1 2 274 3L 9701358 9701376 TACGCTCCAGTAAAGCCTG 59 9701755 9701773 ATGCTGCTCCTCATAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0301435,FBtr0110843 3 3 3 80 3L 9635156 9635177 TATGGAGGATACTTTGCTCCAC 59 9630924 9635116 CACATTGCATCTGTGGAACC 59 NA Drosophila melanogaster 61 Ir67a FBgn0036010 FBtr0076422 3 1 1 87 3L 9536289 9536437 ACCCATTGTACAAGAGTGGT 59 9536221 9536240 ATTTCCGCTAACCATCACCA 59 NA Drosophila melanogaster 61 CG32037 FBgn0052037 FBtr0076469 2 1 1 81 3L 9483907 9484583 GAATCCGCAGGTGTATCAG 58 9483844 9483862 CGTATACCTCCCATCCGAG 58 NA Drosophila melanogaster 61 CG32038 FBgn0052038 FBtr0076462 1 1 1 80 3L 9445108 9445128 GTTACTGGTGGTTTCGATACC 58 9445258 9445406 AAATGACGTGTATCGTTATCCG 59 NA Drosophila melanogaster 61 Glu-RIB FBgn0028431 FBtr0076431 2 1 1 60 3L 9262307 9262537 GCGTTATTTGAGAAAGGTGG 57 9262557 9262578 GTCATCGTTGAATTTGATGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Argk FBgn0000116 FBtr0112791 2 1 6 102 3L 9043447 9057571 GAAATACGCAAACAAGACACC 58 9043365 9043383 TCTTCAACAGCGACTTGGA 59 NA Drosophila melanogaster 61 Doc1 FBgn0028789 FBtr0076522 3 1 1 93 3L 9034646 9034664 TCCATGCAAGAGCTAATGG 57 9034721 9035141 GAAAGGGATCTGGAATCCG 57 NA Drosophila melanogaster 61 Srp68 FBgn0035947 FBtr0076517 1 1 1 91 3L 8969419 8969438 GGCGTACAATATCTACTGGC 58 8969492 8969568 TTGAGCTTAGCCTGTTCCA 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 2 7 7 80 3L 8900035 8900180 ACGTTTACGTGATAGGATGGT 59 8899975 8899993 CATCTCCTGCAAATGAGCG 59 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 1 3 3 81 3L 8608092 8608116 CACTACGATGATCATTCTCTTTCTG 59 8608150 8608328 CTCCAGTTGATCTTTGTACTTCTC 59 NA Drosophila melanogaster 61 CG7182 FBgn0035878 FBtr0076677 2 1 1 60 3L 8338726 8338745 CCCATCAATATCACACGGAC 58 8338685 8338704 TAGCTGGGTATGGATAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 1 1 1 85 3L 8322331 8322349 TCAGCCTGAAGTTACACCC 59 8322398 8322467 AGGAATATGTGTTGGGCCC 59 NA DesignNoJunction Drosophila melanogaster 61 fan FBgn0028379 FBtr0076683 2 1 1 60 3L 8102664 8102682 TGACTGGTGACATAAGCGA 58 8102705 8102724 CGAGTTTCATTCGGGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089851,FBtr0089849,FBtr0089850 1 3 3 91 3L 7628899 7628984 TAGCCATGAAACACTTGGC 58 7629037 7629057 GGACTTTAGATTATTGGCGCT 58 NA Drosophila melanogaster 61 CG7548 FBgn0035792 FBtr0076830 3 1 1 60 3L 7499023 7499043 ACCTTCAGTTATGCTACAGCT 59 7498983 7499001 TTGGTTCCTGATGAGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sphinx2 FBgn0052382 FBtr0300362 3 1 1 61 3L 7433079 7433100 TAAAGCATGTATCCGGAGTAGG 59 7432979 7433000 GCTCCAGCTGCATAATTATACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 3 2 2 80 3L 7344759 7344778 AAGTTGACGGCTATATTGGG 57 7344819 7344906 GTTCTCCGTGTACTCTTTCAG 58 NA Drosophila melanogaster 61 unc-13-4A FBgn0035756 FBtr0290001 1 1 1 80 3L 7262642 7262786 GTGCATAAGCGTACTCTTAACC 59 7262583 7262601 TCCTTCGGTCAAACATTGC 58 NA Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 2 2 2 81 3L 7113837 7113925 GATGCGAAACCAAGAATATCC 57 7113968 7113986 TTTGCTTCTCATCGCTCTC 58 NA Drosophila melanogaster 61 G-ialpha65A FBgn0001104 FBtr0076934 2 1 1 81 3L 6966736 6966757 CAAGAAGGATCTGTTTGAGGAG 58 6966620 6966694 GAAGGTGTTGGTTCCTGTG 58 NA Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076945 3 1 2 100 3L 6907587 6907605 AGTCTGTTCAACCCAAAGG 57 6906619 6907523 TATGTCCAGTTGTGTTGGG 57 NA Drosophila melanogaster 61 CG6592 FBgn0035669 FBtr0077044 2 1 1 81 3L 6053482 6053500 AGGGTCTTTACTGGTGTGG 59 6053545 6053621 CTCTTCGCCATGTCAACAC 59 NA Drosophila melanogaster 61 CG10483 FBgn0035649 FBtr0077077 3 1 1 81 3L 5911513 5911531 CATCTAAACAACGTGGGCA 58 5911256 5911468 AAATCGTGGTCTGATCCGA 58 NA Drosophila melanogaster 61 bc10 FBgn0040239 FBtr0077084 3 1 1 193 3L 5558417 5558435 GAGCATCTAAACGACCCGA 59 5558747 5558765 GGTATCAGTAGTACGGGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13716 FBgn0035563 FBtr0073319 3 1 1 60 3L 4634571 4634590 AGAATATACGGCAGTGTAGC 57 4634530 4634548 TTGAATAGCGTCTCCCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32241 FBgn0052241 FBtr0073330 1 1 1 109 3L 4466457 4466787 CCAAGCAGAAATTCCTGATAGC 59 4466369 4466388 CGCATAGTGGTATCCATCCT 59 NA Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073300,FBtr0073299 1 2 2 206 3L 4429402 4429420 TCAAGACGGAAAGTTCGGA 59 4429653 4429671 GATTTGCAGGAAGACTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 1 6 6 204 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 wit FBgn0024179 FBtr0073279 2 1 1 86 3L 4066268 4066354 CGGAACAGGGAATAAATATCATAGC 59 4066206 4066226 GTATAAGTCCCGTAGTGTCGG 59 NA Drosophila melanogaster 61 Rcd5 FBgn0035489 FBtr0073202 3 1 1 133 3L 4041684 4041763 CATTAAGAGCTCGGAACAACC 59 4041858 4041876 ACAGGGTGTACTGCTTGAG 59 NA Drosophila melanogaster 61 fd64A FBgn0004895 FBtr0073192 3 1 1 107 3L 4019376 4019394 TCCTACATTGCCCTCATCG 59 4019459 4020415 CTCCCTGTAATATGGGAATTTATCC 59 NA Drosophila melanogaster 61 CG14980 FBgn0035470 FBtr0073180 3 1 1 119 3L 3898090 3898111 AGGAAGATCATCCAATGAAGGT 59 3897929 3898010 CAACCTGGTCAGCATTCAG 58 NA Drosophila melanogaster 61 eIF5B FBgn0026259 FBtr0073144 2 1 1 80 3L 3457463 3457482 GATCTGGAGAAGGCTATTGC 58 3457338 3457422 AACTTCCTCTGTGCAAATCTC 58 NA Drosophila melanogaster 61 YT521-B FBgn0027616 FBtr0073079,FBtr0073078 3 2 2 90 3L 3372839 3372977 CGAGAGTGGTAAATTTGCAG 57 3372768 3372786 AATACTAGGCGGCAATACC 57 NA Drosophila melanogaster 61 dro2 FBgn0052279 FBtr0073059 2 1 1 69 3L 3314415 3314433 TGACAATTGTTGTCCTGGC 58 3314466 3314484 CAGGGACCCTTGTATTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cht7 FBgn0035398 FBtr0073124 1 1 1 80 3L 3091930 3091948 AGGTGGAGTTGGAATACGA 58 3091808 3091888 TCACATCATGAGGATCTTTGG 57 NA Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 2 2 2 80 3L 3043322 3043343 ATTGTGAAGCTATCATTGTCCC 58 3043382 3043453 GCATACAAAGGTGAAGTCCAG 59 NA Drosophila melanogaster 61 CG16762 FBgn0035343 FBtr0072968 3 1 1 108 3L 2475117 2475198 CAATGTCATGCCAATGTGG 57 2475027 2475045 GATCTACCACTCGGTAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5690 FBgn0035295 FBtr0072842 2 1 1 106 3L 1949147 1949168 GCAAGAATATCATCAGAAGCAG 57 1949233 1949315 TGAGATTGGTCTCAGTTTCAG 57 NA Drosophila melanogaster 61 CG7974 FBgn0035254 FBtr0072763 2 1 1 91 3L 1666027 1666103 CAATCGATTCAACATCGAGGAC 59 1666155 1666173 GATTCGTCTGATGCTGTGC 59 NA Drosophila melanogaster 61 msd1 FBgn0035209 FBtr0072678 3 1 1 93 3L 1331780 1331798 AAATGTCAGACGCTGTGGA 59 1331905 1331928 TCCATTATCTCGTCTATCTTAGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299865 3 1 6 193 3L 171866 172078 ATAGTAATCACACCACAGCGA 59 172233 172251 TAGGTCTCAAACTCGCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Me28S-A2589c FBgn0086025 FBtr0114301 2 1 1 71 2R 17219093 17219113 AACTGTCACTGATAGTTGGAC 57 17219145 17219164 CAAATGCGAACATCCTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33402 FBgn0053402 FBtr0086394 1 1 1 60 2R 15635642 15635660 ATACATCGGTTCTCGTCCG 59 15635600 15635618 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 gsb-n FBgn0001147 FBtr0072461 1 1 1 88 2R 20938894 20938912 AAATTGAAACGCGGATCGA 58 20935673 20938843 AAAGCCCTCCTTTATCAGCT 59 NA Drosophila melanogaster 61 CG16896 FBgn0035073 FBtr0072423 3 1 1 114 2R 20761967 20761986 GATTCTGATGTGTCGCTCAC 59 20761813 20761891 TTAGGACGTTCCCAGATTCG 59 NA Drosophila melanogaster 61 CG33228 FBgn0261373 FBtr0301037 2 1 1 146 2R 20556619 20556694 CCGAATTTCCAGCTCTTACAC 59 20556493 20556511 CACGTAGCTCTCGATAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3640 FBgn0035042 FBtr0072322 1 1 1 130 2R 20527283 20527301 ACTCCTGGGATTATTGCCA 58 20527470 20527488 CTGCAACTGATTGCTGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13594 FBgn0035041 FBtr0072336 3 1 1 127 2R 20508964 20508982 CCAGCAACTACAACAGCAG 59 20508575 20508873 AGTCAAAGTAGCCGCTCTG 59 NA Drosophila melanogaster 61 CG3483 FBgn0035005 FBtr0072293 2 1 1 60 2R 20333087 20333105 GCGGAAACTGAATAGCCTG 59 20333128 20333147 AGCAAACAGACGATAAGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13578 FBgn0035000 FBtr0072289 2 1 1 227 2R 20265760 20265833 CAAGAAGGAGTACCCTGCC 59 20266022 20266042 TGTATGATCTCCAGTTTCTGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG3253 FBgn0041706 FBtr0072251 2 1 1 81 2R 20003512 20003531 CTACATAGCAGTGGACAACG 58 20003573 20003649 CTCATAAACCTGGGAGTTCCT 59 NA Drosophila melanogaster 61 Mlp60A FBgn0259209 FBtr0299697 2 1 2 80 2R 19963796 19963876 CCAGAGGAAAGGGTTACCA 58 19963917 19963938 CATCACAGTGAAGAGTTGAGTC 59 NA Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166,FBtr0072167 3 2 2 66 2R 19921909 19921927 TGTGATGCGAAAGTGTTCG 59 19922223 19922242 TGTTCAAACTCTCGGTTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5591 FBgn0034926 FBtr0072134 1 1 1 80 2R 19790406 19790485 ACATGTTTGTCACGTACAATGG 59 19790526 19790544 GATTATTGGACGCTGCCTG 59 NA Drosophila melanogaster 61 alphaPS5 FBgn0034880 FBtr0072063 1 1 1 80 2R 19446674 19446694 TCCGAAGGATAACACGATGAG 59 19446736 19446818 CCATCTATGGGACCACCAC 59 NA Drosophila melanogaster 61 CG30181 FBgn0050181 FBtr0072116 3 1 1 80 2R 19426538 19426557 GGATCTGATCCCACCTAAGG 59 19426419 19426496 ACTCCTCCAAAGGATACCAC 58 NA Drosophila melanogaster 61 CG9815 FBgn0034861 FBtr0113111,FBtr0072024 2 2 2 102 2R 19310032 19310050 CTACTCGTGGTCATGTCCC 59 19309785 19309966 GCAGCAGCGTATCATTCAG 59 NA Drosophila melanogaster 61 CG3162 FBgn0034834 FBtr0072052 2 1 1 60 2R 19098213 19098233 GTCGTTTGGAGAACTGAAAGG 59 19098173 19098192 CTTGTTCAGGTTCGTGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9899 FBgn0034829 FBtr0071969 2 1 1 80 2R 19048152 19048259 TGACAGCCAGAACCTATATGG 59 19048298 19048319 GGATCATGTTGTAGTTGAAGGT 58 NA Drosophila melanogaster 61 CG3831 FBgn0034804 FBtr0071993 2 1 1 140 2R 18828244 18828263 CATCGACATAATGCGGAGAG 58 18828038 18828142 ATATGGACGGAGGAACTTCC 59 NA Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300125 3 1 2 180 2R 18671892 18671977 CGGAACGCTGAAATAGTAGC 59 18672120 18672138 CATGCATCATGTGCAGGTC 59 NA InUTR Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300125 2 1 2 179 2R 18671893 18671978 GGAACGCTGAAATAGTAGCC 58 18672120 18672138 CATGCATCATGTGCAGGTC 59 NA InUTR Drosophila melanogaster 61 CG3746 FBgn0034755 FBtr0071929 2 1 1 146 2R 18537031 18537049 CCATCCATCCGGTACTACG 59 18536839 18536921 CGGAAAGATGCAGGATAGC 58 NA Drosophila melanogaster 61 CG3746 FBgn0034755 FBtr0071929 1 1 1 145 2R 18537031 18537049 CCATCCATCCGGTACTACG 59 18536840 18536923 GGAAAGATGCAGGATAGCAG 58 NA Drosophila melanogaster 61 CG4269 FBgn0034741 FBtr0071854 1 1 1 62 2R 18486929 18486947 TAGTGGAGCAACAGAATGG 57 18487433 18487451 TACGAGTAGTGTCACCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11291 FBgn0034713 FBtr0071773 2 1 1 100 2R 18099602 18099620 TTTGGGCAAACCGAATCAG 59 18099681 18099756 TGTCTGATTTAAGCGAGTTTCC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 Tbp FBgn0003687 FBtr0071679 3 1 1 176 2R 17574322 17574342 TACAATCCTAAGCGATTTGCG 59 17574102 17574184 GAACTTTGCAGGGAAACCG 59 NA Drosophila melanogaster 61 CG9143 FBgn0034496 FBtr0086304 1 1 1 113 2R 16164986 16165006 TACTCAAGGTTCTCAATTCGG 57 16164835 16164911 CATTTCGCTTCTGCATGTG 58 NA Drosophila melanogaster 61 Ir56c FBgn0034457 FBtr0086466 1 1 1 60 2R 15398085 15398104 GGTTCAGTGGTGTCTAATGG 58 15398125 15398145 AAGTGGGTAGAAATAGGTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 1 5 5 93 2R 15023507 15023525 CAACTGCAAGGTGTATGGG 58 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0086699 3 1 2 106 2R 14415257 14415276 GAACAGGTGACAGAATGCTG 59 14420216 14420234 AATGGAGAGGAAGCGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5224 FBgn0034354 FBtr0086697 3 1 1 102 2R 14391268 14391287 ACCCATCCTCTATTACGCTC 58 14391352 14391766 CTTTACGTTGACCAGTCGC 59 NA Drosophila melanogaster 61 CG15068 FBgn0040733 FBtr0086727 3 1 1 67 2R 14277961 14278058 CTTTGGCTAGTGCCAATCC 58 14277912 14277930 ATTGCAAACTTTGCAGTCG 57 NA DesignRelaxed Drosophila melanogaster 61 PpY-55A FBgn0003140 FBtr0086817 2 1 1 60 2R 13843431 13843453 CAGATCAATCATATTCAGCGACC 59 13843393 13843411 GGAGATCGCACATGATACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34195 FBgn0085224 FBtr0112388 1 1 1 76 2R 13620923 13620944 GTGGAAAGATTTACCCATTGGA 58 13621043 13621061 ATAACGTCCGGTTCTAGGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15917 FBgn0034199 FBtr0086986 1 1 1 60 2R 13024132 13024151 AGATTCACATACTCGACCAC 57 13024174 13024192 AACGGAGTGCTATTGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6805 FBgn0034179 FBtr0086966 1 1 1 184 2R 12894008 12894307 TTAAGTTCGTGGAAGGCAC 58 12894455 12894473 GTTGAATGTCGCCGATACG 59 NA DesignNoJunction Drosophila melanogaster 61 veg FBgn0015562 FBtr0087051 3 1 2 82 2R 12843173 12843255 TAGCTGTGAGACCTAGAAATCTG 59 12843296 12843315 GTACCAGGAGGACGATAAGG 59 NA InUTR Drosophila melanogaster 61 CG8910 FBgn0025833 FBtr0087071 2 1 1 109 2R 12764587 12764605 TGATGGACATCCAGAACCG 59 12764427 12764516 AGTGGAGTAACGAAATCTGGG 59 NA Drosophila melanogaster 61 Acp53C14c FBgn0053530 FBtr0091496 3 1 1 189 2R 12638635 12638710 CTTCAGCTTGCTTCTGCTG 59 12638464 12638485 AAGGTCCTTAGTCTTAATGGCT 59 NA Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 1 2 2 80 2R 12544694 12544784 TCGGGATATTCCTATTGATGAC 57 12544635 12544653 AAGGACGACAAGATGTAGC 57 NA Drosophila melanogaster 61 CG5089 FBgn0034144 FBtr0087107 3 1 1 60 2R 12487014 12487033 CTAATACCTCCGGCATTACC 57 12487054 12487074 TCCTCCTCAATATACGTTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30098 FBgn0050098 FBtr0087168 1 1 1 90 2R 12242580 12242598 GAATGCTCGAAGGACTCCA 59 12242446 12242526 TAGAACAAAGCGGTAGGCA 59 NA Drosophila melanogaster 61 CG15704 FBgn0034103 FBtr0087136 2 1 1 60 2R 12167660 12167680 TAAGGGAATCACTGGTCTAGC 59 12167702 12167720 ACCACTCCCAAGTACAGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 1 2 2 80 2R 11743567 11743587 GGATAAGGTGTACTCGGAGTG 59 11743629 11743964 CCATATCCACCGCAAAGTG 59 NA Drosophila melanogaster 61 CG34318 FBgn0085347 FBtr0112518,FBtr0112517 2 2 2 65 2R 11353194 11353212 ATCTACAACTTCAAGGCGC 58 11353241 11354092 GACAGTCACCTTGTAGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ir51b FBgn0050081 FBtr0087365 3 1 1 60 2R 11095548 11095566 AAACGCTGCTTACAATGTG 57 11095589 11095608 CTCCCGTGTAGAGATGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp51E FBgn0259966 FBtr0300323 3 1 1 125 2R 11080661 11080679 TCTCACCTGGAGTTCATCG 58 11080491 11080509 AGAATCCAGTACGTTCCGG 59 NA DesignNoJunction Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 1 4 4 107 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026094 11026112 GATTACATTGGCCTGGGTG 58 NA Drosophila melanogaster 61 Spred FBgn0020767 FBtr0087468 2 1 1 110 2R 10651494 10651573 GATCAGAGCGTCATCTTGAG 58 10651403 10651421 AAATGTGAGTCCATTCCGC 58 NA Drosophila melanogaster 61 CG34443 FBgn0085472 FBtr0112747 1 1 1 104 2R 10255549 10255567 GTTACTTTCTTGGCCTGGT 57 10255635 10255710 CAATAGCGGCGAAGATACC 58 NA Drosophila melanogaster 61 CG8503 FBgn0033917 FBtr0087536 3 1 1 90 2R 10131562 10131638 TCATCCATTCAAGATCGCC 57 10131691 10131710 CTCCTTCAGGACTATCTCGT 58 NA Drosophila melanogaster 61 CG8067 FBgn0033891 FBtr0087595 1 1 1 116 2R 9871228 9871246 GTCAAATGTGAACTCCGCG 59 9871326 9871405 TAGTCCAACGTCTTCGCTG 59 NA Drosophila melanogaster 61 CG6220 FBgn0033865 FBtr0087650 2 1 1 128 2R 9580141 9580161 GCCTGAACAATATCAAGACAC 57 9579797 9580051 CAAGCTCGTTCTGAAATCG 57 NA Drosophila melanogaster 61 cbs FBgn0086757 FBtr0087666 1 1 1 109 2R 9339280 9339298 GAAAGGCCCTTAAATCCCG 58 9339371 9339441 CAGCTTGACCTTATCGTCC 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299741,FBtr0299740 1 2 6 106 2R 9152886 9152971 ATATACAAGCAATCCACTTGCC 59 9153038 9153056 CCTTCACGAACTCACTCCT 59 NA InUTR Drosophila melanogaster 61 CG4712 FBgn0033818 FBtr0087758 1 1 2 165 2R 9138859 9138943 AGTCTGTTTCGAAAGGAGGA 58 9138713 9138731 TGTGCCGTTGAATACTGTC 58 NA Drosophila melanogaster 61 CG4663 FBgn0033812 FBtr0087761 3 1 1 167 2R 9116925 9116943 CCTCTATGCTGGACTCCAC 59 9116721 9116798 GCAGCCAATAGAGAATCTTTCTG 59 NA Drosophila melanogaster 61 Sans FBgn0033785 FBtr0087790,FBtr0087791 2 2 2 95 2R 8825967 8826077 GATCGGTTTCACAAAGCCG 59 8826135 8826154 CGTCATGGAATCACTGTCCT 59 NA Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 1 2 2 86 2R 8811822 8811840 CATGCAAGACCATCTGGAG 58 8811964 8811982 CCGAAATAGACGTTGACCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845,FBtr0087844 3 2 2 81 2R 8542529 8542549 GGCTGATGTAATGATCAGAGC 59 8542592 8542662 GAGCTCAGCCTTATACCGA 58 NA Drosophila melanogaster 61 CG13159 FBgn0033721 FBtr0087912 2 1 1 69 2R 8262875 8262893 TGAAGTTCTTCGCTGTCCT 59 8262926 8262944 GTAGTTGCGGTAGATGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 3 4 4 84 2R 7786481 7786499 ATCCTCCAAGGACAACGAG 59 7786135 7786435 GATGTCATTCTTTGGTGTGGT 58 NA Drosophila melanogaster 61 Tapdelta FBgn0021795 FBtr0088153 1 1 1 202 2R 7258211 7258288 ACAAGTACCAGGTGAGCTG 59 7258027 7258045 AAGCTCAGCCTTGATCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7741 FBgn0033615 FBtr0088118 3 1 1 83 2R 7192518 7192536 TCACCTACAAATCAACGCG 58 7192582 7192659 AATTCCTCCGCCTTATCCTC 59 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088104,FBtr0088103,FBtr0088102 1 3 3 131 2R 7108118 7108443 ACACTATCAGCATCGTTGAG 57 7108536 7108555 GGTTCAGGCTCATCTTATCC 57 NA InUTR Drosophila melanogaster 61 CG12935 FBgn0033547 FBtr0088221 1 1 1 80 2R 6697628 6697647 GGTTCCAGCGCATAAATCTG 59 6697685 6697767 GTATGCCATATCCTATCAGAAAGC 59 NA Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 2 2 2 82 2R 5608220 5608240 CCAGAAGTTGTGAACTTTGAC 57 5607468 5608176 CCTGAGATGAGCACATAGC 57 NA Drosophila melanogaster 61 CG30000 FBgn0050000 FBtr0088463 1 1 1 103 2R 5493793 5493811 TTGACCGACGAATATCGCA 59 5493877 5493960 GCGAGATATCGCACTATGGA 59 NA Drosophila melanogaster 61 CG13954 FBgn0033405 FBtr0113059 1 1 1 80 2R 5257805 5257824 TTTGTTACTGCTCATGTGCC 59 5257642 5257764 GCTAACTGGACCATATCATCG 58 NA Drosophila melanogaster 61 Tom7 FBgn0033357 FBtr0088657 1 1 1 101 2R 4839311 4839331 AGGGAGTTAAGGATCGTTTGG 59 4839388 4839521 CTCCCTTCATAAATCCCAAATACAG 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088646 3 1 5 67 2R 4788974 4788992 TTAGCCCGTAGAGTTCGAG 58 4789023 4789655 ATCTTAATGGCTGGCAGCT 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638,FBtr0088637,FBtr0088639 3 4 4 81 2R 4771362 4771380 CCGGACTGATGAACTCCTG 59 4771424 4771735 GAACCTACACCAAGACCCTC 59 NA Drosophila melanogaster 61 CG8746 FBgn0033330 FBtr0088714 2 1 1 60 2R 4680465 4680484 CTCTCGGAGTTCCGTATTCC 59 4680505 4680525 GCTTCTTTCTTTCACGATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8635 FBgn0033317 FBtr0088727 2 1 1 124 2R 4518513 4518591 CCCACCACGGATATTATTTGC 59 4518409 4518427 ACATATCCAGCTGGCAAGG 59 NA Drosophila melanogaster 61 Obp44a FBgn0033268 FBtr0088816 2 1 1 159 2R 4022487 4022505 TGTTGCTATTCTGCTGTGC 58 4022276 4022294 GTCGGGATAGTCGAAGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Sep5 FBgn0026361 FBtr0088876,FBtr0088877 1 2 2 60 2R 3848534 3848555 GTTTAAGGAACGCATAATGGAC 58 3848495 3848515 GGGAAACTGGTATATGCTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB42b FBgn0066293 FBtr0086192 2 1 1 95 2R 2831321 2831340 TTGTAATCGACCAGAAAGGG 57 2831179 2831263 CAAGTCTCGCAGTAATCCG 58 NA Drosophila melanogaster 61 CG15233 FBgn0033076 FBtr0086155 1 1 1 85 2R 2488432 2488450 GTCTTGCTCTTGATGCCAG 58 2488120 2488247 TCGATGTAACCCTTTAGGTCC 59 NA Drosophila melanogaster 61 CG7881 FBgn0033048 FBtr0086033 3 1 1 83 2R 1849516 1849535 AATAGTGAATGGCATTGGCA 58 1849199 1849470 CTTCGTGAGTCCGATTCAG 58 NA Drosophila melanogaster 61 Tsp42A FBgn0033042 FBtr0086045 1 1 1 60 2R 1683524 1683544 TGGACTATCGAGATGGATGTG 59 1683566 1683584 CCACAAACAAGAGAACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 2 2 2 100 2R 1566989 1567070 GTAAATGGTCTTCCGGTGAC 58 1566908 1566926 GTCTTGACTCCAGTCAGCT 59 NA Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111111 2 1 2 81 2R 434547 447873 GTGTATACTTCTGGGTTTCCG 58 447911 447934 CGGAGTGAATATAAGTAAGTGCTG 59 NA Drosophila melanogaster 61 CR33317 FBgn0053317 FBtr0089856 3 1 1 131 2L 20901287 20901345 CTAATTGCCGAGACTGGTC 58 20901440 20901458 TTTGTTACGATAGCGCACC 58 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111249,FBtr0111247,FBtr0111245,FBtr0111246 3 6 6 135 2L 22742090 22742164 CATAATGATCATGGCGGGTG 59 22742262 22742280 ATTCTCAACGTAGGTGGCC 59 NA Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0302386,FBtr0111259 2 2 4 86 2L 22432994 22433013 CTAAACTCGGATCAACTGGA 57 22433115 22433133 GTACCGAAATCGGTCAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31600 FBgn0051600 FBtr0085949 3 1 1 92 2L 21914959 21915027 CTTGTTCTCGGGCTTATACC 58 21914886 21914904 ATAGCTCCTGTTCATGGCT 58 NA Drosophila melanogaster 61 CG1428 FBgn0032967 FBtr0085929 2 1 1 60 2L 21907110 21907128 GGGACAGCTTCAAGATGGA 59 21907151 21907170 ATACCTTTGGCGTTATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 1 5 5 82 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666303 21666321 GAAGCATTTCGTTGGAGGC 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 2 4 4 80 2L 21388772 21388791 CTTTGCCAGATCATATGCCA 58 21388832 21388923 CTACATTTGTTTCATTGGGCC 58 NA Drosophila melanogaster 61 E2f2 FBgn0024371 FBtr0081501 2 1 1 80 2L 21154976 21155116 GCGTAATCATTACGAGCTGG 59 21154915 21154934 CTCTTTCCTTGGTTCGTCAC 58 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404,FBtr0081405 3 2 2 61 2L 20644599 20644681 CTAATAAGTTTCCGGGAGGC 58 20644557 20644576 ATCCTTTAGGGATTCCTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG18858 FBgn0042175 FBtr0081364 1 1 1 81 2L 20457512 20457530 CTTCGATCCACCGAATGTG 58 20457384 20457470 CGATTTCTTGTACTGCAGTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG15130 FBgn0032860 FBtr0081366 3 1 1 64 2L 20424292 20424311 AAGAACTCCGAAATGGACGA 59 20423246 20423264 AGATAGTCGCTCTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG40174 FBgn0058174 FBtr0100564 1 1 1 127 2L 20258193 20258211 GAAGAACATGAGACCCGCT 59 20257980 20258102 CAAACGATGGCGAAATCCT 58 NA Drosophila melanogaster 61 vls FBgn0003978 FBtr0081347 3 1 1 128 2L 20064994 20065069 GTACCCTCAATGTCTGGGA 58 20064884 20064905 CACAGGTCACAAATTTATCGAC 58 NA Drosophila melanogaster 61 CG34051 FBgn0054051 FBtr0100106 3 1 1 89 2L 19960589 19960675 GATATTTCGAACTGGAGCAGAG 59 19960521 19960545 GTCAGTTATATTCTTCTTTCGACCC 59 NA Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 3 2 2 81 2L 19762535 19762558 CATCCTATACCACATGTCTAATGG 58 19762295 19762497 ATGTATTTGCCCTGTTTCTCC 58 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 1 3 3 122 2L 19437119 19437676 TCTTCTAGAAGCGGAGACG 58 19436947 19437034 GCGTAGTACCGCTTAATCAG 58 NA Drosophila melanogaster 61 CG10492 FBgn0032748 FBtr0113043,FBtr0081148 1 2 2 106 2L 19056065 19056262 AGCACGATAGTGTCAACGA 59 19056330 19056350 CTTGACTCGATGATTGTGTCC 59 NA Drosophila melanogaster 61 CG10621 FBgn0032726 FBtr0081191 1 1 1 96 2L 18953225 18953243 GATAAAGAACACGGTCCGC 59 18952987 18953165 CAAAGGGTATCCCTCCTGC 59 NA Drosophila melanogaster 61 CG17323 FBgn0032713 FBtr0081104 1 1 1 98 2L 18825159 18825249 GATGTACAAATTACTATCGGTTCCC 59 18825304 18825323 GATGTGTTCTTCACCAGCTC 59 NA Drosophila melanogaster 61 CG17324 FBgn0027074 FBtr0300818 3 1 1 89 2L 18820942 18821026 ACTCTGTACAACATGATTACCC 58 18821076 18821094 CACGATCTCATTGATGGGC 58 NA Drosophila melanogaster 61 CG10373 FBgn0032704 FBtr0081127 2 1 1 60 2L 18705420 18705442 CGAGTTATCAGAAGCTCTTTCAG 59 18705382 18705401 TTTGGGTTATTGCGGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112804,FBtr0112805,FBtr0081052,FBtr0081051 1 5 5 149 2L 18320723 18383414 CTTAACAGATGCACTCACCTG 59 18383525 18383543 TTGAGTACCTTCTGCTCGC 59 NA Drosophila melanogaster 61 btv FBgn0023096 FBtr0273418 3 1 1 80 2L 17980422 17980442 CCCTGTTACGTACTAACTTCG 58 17980296 17980380 CGTCACGAAGTCTTAGCTC 58 NA Drosophila melanogaster 61 btv FBgn0023096 FBtr0273418 2 1 1 80 2L 17971461 17971546 CAATATGAGTTACGACTACTATCCG 58 17971405 17971423 TGCAATAGGTCGCCATAGG 59 NA Drosophila melanogaster 61 CG15143 FBgn0032647 FBtr0080993 2 1 1 80 2L 17523935 17524016 CGCTTTACAGAGAATCCTCTG 58 17523875 17523893 GTTCCAAGGTTTCAACGCT 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080905,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080906,FBtr0080899,FBtr0080907,FBtr0080900 1 16 16 90 2L 16770756 16770774 AGATCAGGTTGTGCAGACC 59 16770825 16770919 GAATTTACCGAAACGAGAGGAG 59 NA Drosophila melanogaster 61 LSm7 FBgn0261068 FBtr0080934 1 1 1 60 2L 16742853 16742871 GAATCCTCAAGGGCTACGA 58 16742811 16742830 AGATACTCCACCGTGTTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trpgamma FBgn0032593 FBtr0080946,FBtr0080945,FBtr0114470 2 3 3 80 2L 16665272 16665351 ACGACAAGTGGTCTCACTG 59 16665210 16665231 AACCGGACAAATATTCTTGCTC 59 NA Drosophila melanogaster 61 ms(2)35Ci FBgn0011239 FBtr0080731 1 1 1 60 2L 15293137 15293219 TATGATTGCCTTTGTATCTGCG 59 15293239 15293258 AACCTCCGATTGGTAGTAGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 3 2 2 287 2L 14743257 14743275 TAGAACGCTTTCGACAGTG 57 14743599 14743618 TTAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 elB FBgn0004858 FBtr0080637 2 1 3 119 2L 14391933 14392242 TATTATCCACCCGGTTACGG 59 14391833 14391851 GGCGTAGTTCAGATACGGA 59 NA Drosophila melanogaster 61 mTTF FBgn0028530 FBtr0080641 2 1 1 89 2L 14347714 14347733 CATCGTCTTGGTTTCAGCAC 59 14347589 14347665 CTCTTTGATCTTGGTAACTCGC 59 NA Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 1 2 2 80 2L 13794615 13794901 GGAGATCATATCAGCTGCCT 59 13794941 13794962 TTTCCATTAAGTGTTGGCTCTG 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0089911,FBtr0302141,FBtr0302139,FBtr0302138 1 5 9 87 2L 13267965 13271307 GAATTGTCGTATGGACAGCG 59 13271357 13271375 TTGTCATCATCGCGTTCTG 58 NA Drosophila melanogaster 61 CG16813 FBgn0032490 FBtr0080446 2 1 1 60 2L 13228054 13228072 ATTGTGGCTACATCGACAC 58 13228096 13228114 CCATGTTAGCGTGGTAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek1 FBgn0015399 FBtr0080401 3 1 1 144 2L 12819348 12819367 TGAACCATCAGAAGCAGGAG 59 12818960 12818981 GTTTAGTCAGTTCTTGGTTTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17036 FBgn0032449 FBtr0080408 3 1 1 81 2L 12699824 12699843 TAGTTCCTACTCCAATCCCG 58 12699698 12699782 GGAGATCACTTGAACTTGACC 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 2 2 8 85 2L 12536279 12536297 AATGCAGAGTCCGAGACTG 59 12458213 12477122 TTGACCAGATCCATTGCCT 59 NA Drosophila melanogaster 61 CG18666 FBgn0040967 FBtr0080160 3 1 1 60 2L 11034893 11034911 TGATGATTCCAGTGACGAC 57 11034933 11034953 AGGATCGGAATACTGATCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp32CD FBgn0023415 FBtr0080158 3 1 1 149 2L 11016281 11016299 GAGAGCAGTCAGGAGAACC 59 11016412 11016496 AACCTGTGGTCAGATCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Dnz1 FBgn0027453 FBtr0080181 1 1 1 83 2L 10856212 10856230 TACGGAGCAGTTCTGTACG 59 10856083 10856165 GAAGGACATCCAGAGGCTG 59 NA Drosophila melanogaster 61 CG6138 FBgn0032268 FBtr0080098 1 1 1 61 2L 10567847 10567868 CTTGGTATGGAACAACAAAGAG 57 10567885 10567908 CTATAAGTGTAGTTTCACTGTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13144 FBgn0032260 FBtr0080037 1 1 1 60 2L 10490605 10490623 GTGCGTCAGAATTTCCACC 59 10490563 10490581 TAATCCTCGCCGAGATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Grip75 FBgn0026431 FBtr0080033 3 1 1 80 2L 10483565 10483585 CAAGAAGTTGAGCAGTTTACC 58 10483625 10483703 GTAACCATGCAAACTATCTGG 57 NA Drosophila melanogaster 61 CG4957 FBgn0032205 FBtr0079985 2 1 1 80 2L 10269479 10269499 GCCACCAATGATGCTATAGAG 59 10269540 10269621 GCATAGGAAATTGACGGAGC 60 NA Drosophila melanogaster 61 CG9525 FBgn0032080 FBtr0079786 3 1 1 60 2L 8961802 8961822 TGGCAGAGGATCTACAATCAG 59 8961762 8961782 GGTGCATATGTCTTAGGAGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13090 FBgn0032054 FBtr0079683 1 1 1 60 2L 8517536 8517556 GCTCTGTGTACAAGTAATCGA 57 8517578 8517678 GGATTCCATCATTGTGCGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7810 FBgn0032017 FBtr0079612 1 1 1 60 2L 8310725 8310743 AAACCGAAGATACCATGCC 57 8310683 8310704 GTGTTCGCTAAAGTATTCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spn2 FBgn0028987 FBtr0079624 3 1 1 86 2L 8240904 8240925 TGGATGTAACTTTAAGGCTTCC 58 8240780 8240857 CATCTTGTATGCCCATCGC 59 NA Drosophila melanogaster 61 fos28F FBgn0013442 FBtr0273229 3 1 1 124 2L 8180748 8180769 CCAATCTGACTCCAAATCTTCG 59 8180854 8181070 CTTATCCGCCGACATTTGC 59 NA Drosophila melanogaster 61 CG12375 FBgn0031987 FBtr0079642 2 1 1 109 2L 8126765 8126784 AAGTGTTTCATTTCCCTCCT 57 8126617 8126636 GGATTACAACCCAGTATCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7429 FBgn0031979 FBtr0079540 2 1 1 121 2L 8041180 8041257 TGGACAAGACCCAGATACC 58 8041342 8041360 CACGAACTTCGTCTCACAG 58 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 2 2 2 81 2L 7988312 7988401 GGGTATTACCTTGTATGAGAATGTC 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 CG7203 FBgn0031942 FBtr0290272 1 1 1 212 2L 7752810 7753115 AAGCCAACATGAAGTTCGC 59 7752616 7752634 CTGGTCCAGACTGGATGAG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG5181 FBgn0031909 FBtr0079467 3 1 1 109 2L 7409506 7409588 AGTGAGGAACTTCAAGGTGG 59 7409416 7409434 AGCCCTTTGTCAGTCTGAC 59 NA Drosophila melanogaster 61 CG13786 FBgn0031900 FBtr0079409 1 1 1 80 2L 7251490 7251508 TTGTGAGGACACCGAAGAG 59 7251356 7251447 GGTGGTATTGGACTTGATGG 58 NA Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 2 2 2 90 2L 7196231 7196326 CGACAAGATCACAAGGTGG 58 7196159 7196177 ATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028,FBtr0079405 3 2 2 88 2L 7183803 7183879 CTATGATCCCAAGTCTGTTGG 58 7183929 7183947 TGATCAGTCCGTAAGAGCC 58 NA Drosophila melanogaster 61 CG9523 FBgn0031812 FBtr0079257 3 1 1 95 2L 6425661 6425738 TCCTGTCAACTATGCAGCC 59 6425797 6425815 GTGTTCATCAGCAGACGTG 59 NA Drosophila melanogaster 61 Pez FBgn0031799 FBtr0079284 1 1 1 80 2L 6333905 6333925 CCAGCTAACCGAGGATATGAG 59 6333791 6333866 TCCTGATACACTTGGAACTGTC 59 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 1 4 4 92 2L 5976671 5976690 CATTTACCTTTCCGGCACAG 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 CG9029 FBgn0031746 FBtr0079143 1 1 1 287 2L 5886035 5886053 GTATTTGCATTCGCCTGTG 57 5886369 5886387 AGTTTCTAGGAGCGGAACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14010 FBgn0031725 FBtr0079116 3 1 1 84 2L 5606160 5608801 CGGAGAGGAGGTTATGAGC 59 5606094 5606112 TATGCACAAGTAGGCTCCC 59 NA Drosophila melanogaster 61 GluRIIB FBgn0020429 FBtr0089577 2 1 1 80 2L 5560523 5560656 AGGAGTTCCCACCTTATTCG 59 5560695 5560717 GAATTCCTGCATCTTGATACCAG 60 NA Drosophila melanogaster 61 CG14015 FBgn0031716 FBtr0079126 1 1 1 80 2L 5538026 5538105 ATTCATTGGACACATAAGGCTC 58 5537967 5537985 GGCAGTTTGCTGTAGAAGC 59 NA Drosophila melanogaster 61 Bub1 FBgn0031696 FBtr0079069 3 1 1 107 2L 5281982 5282084 GTGATCAGGTGCTGAAACG 59 5282153 5282173 AGAACTCGGTGGCTATTAGAC 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 2 5 8 93 2L 5069211 5070107 GCGCGTAAGACCATTTATCG 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 2 6 6 60 2L 5047161 5047179 CAGACGTTAAGCGACATGG 59 5047198 5047287 CTTCGTTATAGATAGCTGCATTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 1 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 HP6 FBgn0031613 FBtr0077444 1 1 1 60 2L 4577823 4577842 TCGGACAATGGGTATGAGAC 59 4577782 4577801 ACTAGGCATTTCGTGATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15438 FBgn0025684 FBtr0077456 3 1 1 89 2L 4447841 4447913 CCAGTCAGAATTTGTGCCC 59 4447770 4447791 TAATCCCAGTCAGAAGAGTACC 58 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 2 4 4 81 2L 3780571 3781917 GGATCACAGGTATATTCACTCCA 59 3781958 3781976 CAAGGTTCTCGATTGGCAG 58 NA Drosophila melanogaster 61 CG8853 FBgn0031550 FBtr0077529 3 1 1 95 2L 3531116 3531134 CTCGGAAAGGATATGGAGC 57 3531193 3531265 CACTGGGACATCAATCTCC 57 NA Drosophila melanogaster 61 CG17593 FBgn0031544 FBtr0077525 1 1 1 103 2L 3515270 3515731 ACTTCCAGGATGAGGAAGAG 58 3515795 3515815 AGGGATGTTTGGTATGTTCAG 58 NA Drosophila melanogaster 61 pgant2 FBgn0031530 FBtr0077592 2 1 1 80 2L 3407296 3407315 AGTGTCCTTAACCGAAGTCC 59 3407137 3407254 ACCATCCTCAGGATGATCAC 59 NA Drosophila melanogaster 61 CG3285 FBgn0031522 FBtr0077586 2 1 1 81 2L 3330993 3331011 TTCGCCAATCCGAATTGTC 58 3331054 3331135 AGAAGGTAGCTATGTTCAGCA 59 NA Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077692,FBtr0077691 3 2 2 96 2L 2837277 2837354 TGACGATACGTACGTGGTC 59 2837199 2837218 GTATCGCGACATCTTGTAGC 59 NA Drosophila melanogaster 61 aph-1 FBgn0031458 FBtr0077716 1 1 1 87 2L 2766629 2766647 CATCCTGGCCTATGTCTCC 59 2766698 2766775 GGGACCACTCATATCAGCC 59 NA Drosophila melanogaster 61 CG9962 FBgn0031441 FBtr0077743 3 1 1 60 2L 2647054 2647074 TTTGTTGTAAAGTGCAGTCCC 59 2647014 2647033 TAAATGAGGACGTAGCCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31933 FBgn0051933 FBtr0077896 3 1 1 60 2L 1822977 1822996 ACATCGACAGAATCTTGCAG 58 1822936 1822958 CAATAGCACTTTATCTGCCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14223 FBgn0031053 FBtr0074758 3 1 1 114 X 19554623 19554706 CTCTGCCTTATTTCCCTGC 58 19554527 19554545 CAATAAAGTCCTCGCCACC 58 NA Drosophila melanogaster 61 CG11750 FBgn0030294 FBtr0073456 3 1 1 170 X 11253423 11253442 AGCTAGAGGGCTACTATCTG 57 11253641 11253659 CAAAGTCGTTGGCCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Mcm3 FBgn0024332 FBtr0070762 3 1 1 92 X 5219305 5219323 GTTACCATTTCCAAAGCGG 57 5219377 5219460 TTGATCATACCTTCCGTACAC 57 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 3 5 5 141 X 4962824 4962938 GAGCCAAGATGTACGTGTG 58 4963041 4963061 GAGTTGGTGAACTTAAAGTGC 57 NA Drosophila melanogaster 61 Femcoat FBgn0041252 FBtr0070663 2 1 1 94 X 4136787 4136807 AGACAATGCTGAGATTTGGAC 58 4136606 4136624 CTTGGGCAGCTTCAATAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0070437 1 1 4 84 X 2476848 2477033 GAGTACCCACATATCTTCTTTACC 58 2477074 2477094 GTGCAATCATCTTGTACTCCA 58 NA InUTR Drosophila melanogaster 61 CG7046 FBgn0038979 FBtr0301483 2 1 2 96 3R 18318733 18318998 AAATCATGATGTCAGACTACGG 58 18319055 18319073 TCCGCTCTTATGTTCTTGC 58 NA InUTR Drosophila melanogaster 61 CG5038 FBgn0038324 FBtr0083089 3 1 1 60 3R 11178313 11178332 TTATGATGGTACGGACTCGG 59 11178355 11178373 TTGAACAACTGCTCCTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 2 3 3 119 3R 10616866 10616885 TTACAGTAGTGCCTCGACTG 59 10616967 10619175 GTGGCTTGTATCTTGCCAC 59 NA Drosophila melanogaster 61 Mst84Da FBgn0004172 FBtr0081584 2 1 1 105 3R 3191578 3191599 CCACCTTCAATAGTTAACACCT 58 3191665 3191683 ACGTAATTCGGGTTGACGT 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Edg78E FBgn0000551 FBtr0078408 2 1 1 112 3L 21290724 21290818 TATCTGTTCTGTCTTGCTCTC 57 21290632 21290650 TACTGGTAGTTGCCCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33255 FBgn0053255 FBtr0074997 3 1 1 126 3L 19417905 19417924 GGAACTACAATGGAATCGCC 59 19418010 19418409 TTTGGAATGAGAAGAACTAGCG 58 NA Drosophila melanogaster 61 Ncc69 FBgn0036279 FBtr0075987,FBtr0075988 1 2 2 81 3L 12366727 12366750 CTCAGTGTTTGCTATATTCTTCCC 59 12366612 12366687 TTGTGGGTCCTTCAGATCG 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 3 4 5 115 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586655 8586674 CTAAGCGGTAAGTCGATGTC 58 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34213 FBgn0085242 FBtr0112406 2 1 1 81 2R 19854979 19855051 GAATTCAGATGAGGGAACCC 58 19854917 19854937 GAACTGGAAACTAAATCCAGC 57 NA Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0113093 2 1 2 221 2R 14419977 14420193 AGATTGGTCTCACCACACC 59 14420378 14420396 CAGAGGAATGATGGTTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10799 FBgn0033821 FBtr0087748 1 1 1 60 2R 9145788 9145809 TGAGAGGAACAGGAATATAGGG 58 9145827 9145848 ATCTCTGAAATCAGCATTTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15254 FBgn0028949 FBtr0080783 3 1 1 128 2L 15614672 15614691 CAGCTGGCTATATTGAAGGC 58 15614507 15614582 GATGCTCGGTGTCAATATCG 59 NA Drosophila melanogaster 61 CG15483 FBgn0032457 FBtr0080402 3 1 1 136 2L 12761221 12761239 TCAATATGGGACGCAACGT 59 12760990 12761122 TGGAATTCCAATCACTTGGC 58 NA Drosophila melanogaster 61 CG4629 FBgn0031299 FBtr0077990,FBtr0301094,FBtr0077992,FBtr0077991 2 4 4 86 2L 1085133 1085215 CCCAACTCATCAATGGTGC 59 1085065 1085083 GGTCATCGGAGAAGAGCTC 59 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 3 5 5 61 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451841 21451860 TTATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 3 4 4 75 X 6637145 6637163 TTACTCACGCGAGTCAGAC 59 6636287 6637106 GTTCTTGAAGTGCACACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 1 4 4 135 2R 8641313 8641405 TTCATGTTTGGCAAGTGCA 58 8641196 8641217 CCTTATCCATGTTCACCTTACC 58 NA Drosophila melanogaster 61 CG3306 FBgn0036016 FBtr0076380 2 1 1 60 3L 9595046 9595065 CCGATTCTACCAGGAAACCA 59 9595087 9595106 GGACTGGAACTTATTCGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7737 FBgn0033584 FBtr0088105 1 1 1 128 2R 7110515 7112096 GATATTCAGTTACCCGGAATGAG 58 7112184 7112202 GAGCACATTCTGAAAGCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pax FBgn0041789 FBtr0081214 1 1 6 167 2L 19404136 19404154 GAGGAGGGATTCCATGAGC 59 19403705 19404005 CTTCTTGCAATCCCTGCAG 59 NA Drosophila melanogaster 61 squ FBgn0002652 FBtr0080887 2 1 1 157 2L 16680643 16680716 TTTGTTAGACAACGCACGA 58 16680836 16680855 TCATATGTGCATTTCGGTCG 58 NA InUTR Drosophila melanogaster 61 Scgalpha FBgn0032013 FBtr0079597 2 1 1 80 2L 8304761 8304850 TGGTTCTGAGAGCTCTTCC 58 8304892 8304912 TTGGATTTGCTATCCGAACAC 59 NA Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 1 2 2 92 X 1758265 1758285 GAATATTCAAGCAACAGCGGT 59 1758131 1758217 GGTTTAGTAAATATGCTGAAGTCCC 60 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084580 2 1 3 90 3R 19977631 19977649 CGGAATGGAGTAATAGCGC 58 19977459 19977577 TAATGGTGCCTCTGTTCCA 58 NA InUTR Drosophila melanogaster 61 CG10252 FBgn0039104 FBtr0084475 2 1 1 80 3R 19521635 19521653 CAAGTTGACTCGCTATGGC 59 19521513 19521592 CTGCTTCGCTTATCGATGAC 59 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 1 2 2 102 3R 67637 67713 ACATCCATATACGAGGCGC 59 67553 67571 CTTGCTCAATCCGAAGCAG 59 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 1 5 5 119 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 RpL11 FBgn0013325 FBtr0086533 2 1 1 60 2R 15330558 15330577 ATCGGTATCTATGGTCTGGA 57 15330600 15330832 GGTTCACATTGTAGCCAGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Clic FBgn0030529 FBtr0073835 2 1 1 80 X 13708912 13715970 ATTGATCATAAAGGCCTCGAC 58 13708852 13708874 TATAGGTCCATGAAGTACTCCTG 58 NA Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088865 3 1 2 231 2R 3919527 3919545 AGATTATAGCACCCAGCCC 59 3919739 3920818 TAAAGTTCCCTGAAGTTGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11085 FBgn0030408 FBtr0073656 3 1 1 152 X 12510775 12513695 AGATTCGGAACTGGAGCTC 59 12513811 12513829 GACTCCACACTGGATTCGT 59 NA Drosophila melanogaster 61 snoRNA:Me18S-C1024 FBgn0086043 FBtr0114319 1 1 1 60 X 1995976 1995995 CAATTCAAAGTGCTTTCGCT 58 1996018 1996036 TTGTAGCCATCCTGTGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301618 2 1 2 106 X 22397614 22406457 CAAATCAGAGACCAATCTCGA 57 22397528 22397546 GTGAAGAGCTCCTGATCCT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077234,FBtr0077235 3 2 3 193 X 21077605 21082118 CCAATCCGTCAGAGGTGAG 59 21077430 21077448 GTTTGAGTTGGGTAGGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32512 FBgn0052512 FBtr0077262 1 1 1 80 X 20937677 20937695 GATGACTAGGCAGGTGTCC 59 20935059 20937634 CGCGTCAGAATTGTGTACAG 59 NA Drosophila melanogaster 61 CG7423 FBgn0030982 FBtr0074704 2 1 1 73 X 18977159 18977177 GACAATCAAGAACGGCGTG 59 18977104 18977124 TCTGATCGTTCACATTAAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6900 FBgn0030958 FBtr0302363 1 1 1 102 X 18679939 18679957 GCTGATCAAGGATGTCCTC 57 18680096 18680114 AACTTGGAGGTTCAGTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300978,FBtr0300976,FBtr0300979,FBtr0300975,FBtr0089800,FBtr0300977 3 6 6 91 X 17794326 17794655 GACTCGTTGAATTTCGCCC 59 17794710 17794728 TTGATGATCGGCTGTAGGG 59 NA Nonspecific Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 2 2 2 63 X 16182294 16182312 TTTGTTTCTCGGCATGCTG 59 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15599 FBgn0030667 FBtr0074061 1 1 1 177 X 15581208 15581226 CATCCGAAGCCAATTGACC 59 15580971 15581067 GATTCTTCGGCGTATTGCT 58 NA Drosophila melanogaster 61 CG9053 FBgn0030606 FBtr0073969,FBtr0073968 1 2 2 60 X 14960194 14960212 GAGTGCCTATACCACTCGG 59 14960152 14960173 CGATTACCTGGTACTCAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ste:CG33238 FBgn0053238 FBtr0300087 3 1 1 110 X 13952401 13952419 TCTGATACACAGCTGGACG 59 13952249 13952327 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42629 FBgn0261388 FBtr0302270 1 1 1 80 X 12967046 12967065 TCCATACGGAACAAGAACAC 58 12967108 12968458 GCTGTCCCTGTAATCTGTC 57 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 2 2 5 86 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483126 12483145 GAATCACTAACTGGTGTGCC 59 NA Drosophila melanogaster 61 inaF-C FBgn0085350 FBtr0112523 1 1 1 215 X 11625326 11625346 TTCTTTCTGTCCATCTACCAC 57 11621345 11621363 TTCCGATGAGTTCAGGAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1572 FBgn0030309 FBtr0073543,FBtr0073544 1 2 2 80 X 11450263 11450283 CTCCTACATTGTCCTGAACAC 58 11450131 11450222 GAAGCACCAATGATCAGCTC 59 NA Drosophila melanogaster 61 CG32690 FBgn0052690 FBtr0071437 1 1 1 80 X 10098473 10098494 GCATTTCTCGAACAAGTTACAG 58 10098600 10098618 CTTGTGCCGACATTTCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302153 2 1 2 80 X 9259961 9259981 AAGGATCTACATCTGCGATGG 59 9259827 9259919 TTACGGTCATTGCACTGGT 59 NA Drosophila melanogaster 61 CG1575 FBgn0029999 FBtr0071151 1 1 1 60 X 8012615 8012633 AGCCAACGATTTACCACAC 58 8012657 8012675 TCTCGCAGAGAAGGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL7A FBgn0014026 FBtr0070915,FBtr0070916 3 2 2 153 X 6425461 6425882 GTTGATCCTCTGGAGCTGG 59 6425326 6425344 TGTCGTTGTTATCGACGGT 59 NA Drosophila melanogaster 61 Btd FBgn0029848 FBtr0070878 1 1 1 116 X 6113109 6113280 CAGTTCGCATCAGCTTTCC 59 6113011 6113029 AAGGATTCCGAAGCTGAGG 59 NA Drosophila melanogaster 61 CG42449 FBgn0259926 FBtr0300221,FBtr0300222 2 2 2 62 X 5577471 5577491 TGGAATAGTCCCAGCTTTGAG 59 5577515 5577533 CTTGGTCACATGCGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12730 FBgn0029771 FBtr0070780 3 1 1 65 X 5411487 5411505 AAATACCTGCTCAGCATGC 58 5411605 5411625 TATTCCAACAAAGCTGCACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15930 FBgn0029754 FBtr0301881 1 1 1 81 X 5211058 5211141 GTCGAAGATATCGCTTTGGAG 59 5210997 5211018 CAATTGTTCCATTGATCTGCTG 58 NA Drosophila melanogaster 61 Usf FBgn0029711 FBtr0070701 1 1 1 60 X 4441433 4441453 GAGTACATCAAGAGCATGCAG 59 4440832 4440850 CCGTCTCCCTTAGACAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2681 FBgn0024997 FBtr0070480 3 1 1 119 X 2604824 2604842 ATGACCCAGAAGTTTCCCG 59 2604924 2605012 ATGAAGAACCTTGTCCTGGT 59 NA Drosophila melanogaster 61 CG17777 FBgn0040900 FBtr0290085 3 1 1 143 X 2080965 2081190 AAGTTCTTGTGCGTGTTCG 59 2081297 2081315 GAACCCGTAGATGCCTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14795 FBgn0025393 FBtr0070285 2 1 1 96 X 1406507 1406525 CAAGCTGCGTAAACAGGTG 59 1406374 1406448 CAGTTTCTGCGTCTTCACTG 59 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 1 4 4 80 X 522709 522792 TTGAAGAACATCCAAACCCG 58 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 2 4 4 87 X 423499 423517 AGTTCGCCAAGAACTTGGA 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 elav FBgn0260400 FBtr0100254 3 1 3 155 X 414228 414251 CTACACCTACAGTACACATATCAC 58 413262 414117 CATAATAAAGTCCACTTCGGCA 58 NA InUTR Drosophila melanogaster 61 Su(Ste):CR42443 FBgn0259874 FBtr0300171 1 1 1 60 U 9813231 9813250 GCAATTAAACAGATTCCGCA 57 9813272 9813291 TGAGGTGTATTTGTAGGTGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41423 FBgn0085644 FBtr0114088 1 1 1 102 U 2928020 2928038 CCGACGAGAATCAAACCCT 59 2928103 2928507 AATCGTGAGGATCCTTTGCT 59 NA Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 1 1 1 69 U 2759848 2759866 TCGACACTGTCCTATGGAC 58 2759743 2759817 AAGTTCTGTATCCGTACTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17471 FBgn0039924 FBtr0100543,FBtr0100544 2 2 2 80 4 1216413 1216484 TAAAGCAATACCATCCGTACG 58 1216353 1216373 CAGTGATACGATACATTCCCA 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-3091b FBgn0082978 FBtr0113578 1 1 1 102 3R 1422346 1422364 TGGTCTTGTCCTGGATGAC 59 1422262 1422280 TCATTGGCCTTTGATGCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR18228 FBgn0037560 FBtr0300631 3 1 1 113 3R 4087591 4087610 CAGAGTACTGGCCATTACGA 59 4087296 4087320 CTCAGAATAGTGTATCTGCAAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11539 FBgn0039859 FBtr0085868 1 1 1 60 3R 27441622 27441640 AGTGGATGAGCAACGAGAC 59 27441580 27441600 TCTTCTAAGGTCAGTTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lox FBgn0039848 FBtr0085810 2 1 1 101 3R 27284646 27284664 CCTGATGGACAGTGAATGC 58 27284508 27284526 ACATCGGTGTAGGTGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684,FBtr0110860 2 2 2 98 3R 26339292 26339311 GGAAAGGTCCTCAAACAGAG 58 26339154 26339233 CTTCATTTCTCCTTTCGAACC 57 NA Drosophila melanogaster 61 dmrt99B FBgn0039683 FBtr0085454 3 1 1 122 3R 25519546 25521279 GGATGAGAGTCCTGTGTCC 59 25521365 25521383 GTCAGATTGAACAGTCCGG 58 NA Drosophila melanogaster 61 Dr FBgn0000492 FBtr0085441 2 1 1 299 3R 25383376 25383395 TGCAATCCACGATACTTTCC 58 25389964 25389982 ACTTCTTCTCCAGCGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Noa36 FBgn0026400 FBtr0085320 1 1 1 88 3R 24424491 24424509 CTTCTGCAACGGATTCCTG 58 24424329 24424349 ATTGACACTTGTAGTTCTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 ymp FBgn0261287 FBtr0084895 3 1 2 80 3R 21419245 21419320 GAAGTACCTCAAGTTCATGAGG 58 21419186 21419204 GCTGTGTCACCTTGATTGG 59 NA Drosophila melanogaster 61 bai FBgn0045866 FBtr0084758 2 1 1 80 3R 20865339 20865428 CATCGACTACATTGCACGC 59 20865472 20865490 ATGAAGCTGAACTTGCCCT 59 NA Drosophila melanogaster 61 Ir94f FBgn0051225 FBtr0290293 2 1 1 60 3R 19309111 19309131 GACTTAAGCACAGTTCATCGG 59 19309152 19309171 AAACCACATTCTGCCATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34034 FBgn0054034 FBtr0300407,FBtr0100089 2 2 2 102 3R 17564788 17564809 TCTACGATCATTGGATTGTGTC 58 17564645 17564728 CTGTATGCATGTTGCAATTTCC 59 NA Drosophila melanogaster 61 CheB93b FBgn0051438 FBtr0084090 1 1 1 114 3R 17235011 17235031 GATCTTTCCCGATTTAACCGT 58 17235107 17235187 TGTTTACTTCAACCGCGAC 58 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 2 3 3 82 3R 16678288 16678431 TTTGTTACAACAGGGAGGCA 59 16678225 16678243 CGATAACCACGATCCACCA 59 NA Drosophila melanogaster 61 Ino80 FBgn0086613 FBtr0083771 3 1 1 80 3R 15224741 15224759 CTCGATTGAAGGCGAATGG 59 15224619 15224697 ACATGTACTCCTCGAGCAG 58 NA Drosophila melanogaster 61 CG7685 FBgn0038619 FBtr0083630 3 1 1 125 3R 14231131 14231212 CCCATCAAGATTGTCAGGG 57 14231301 14231319 GTAGTTGTCGTTCAGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14907 FBgn0038455 FBtr0113242,FBtr0083354 1 2 2 60 3R 12477491 12477509 CTGCTAGAGATCCCAAGGT 58 12477449 12477468 GCGTACATAAGTTCGTTCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14883 FBgn0038432 FBtr0083291 2 1 1 80 3R 12282428 12282523 CAGCCATTAAGAAGTGCCTC 59 12282565 12282584 CGACTATTTCACCACAGGAC 58 NA Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 5 5 84 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723135 11723281 CCTTTCAGTTGGTTGTAAGACTC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0302146,FBtr0083033,FBtr0302142,FBtr0083030,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 10 10 90 3R 11004008 11004027 CTACGATCATCACTACAGCC 57 11002000 11002088 ATAGCGAGATGGGTACCTG 58 NA Drosophila melanogaster 61 140up FBgn0010340 FBtr0082909 3 1 1 80 3R 9950953 9951036 TTTACAATCGACGAGTTTGGC 59 9950893 9950915 TCCAATAAGGAATCCTAGGAAGC 59 NA Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744,FBtr0082742 1 3 3 88 3R 9136823 9136906 GACGTGAAGCAGATCATGC 59 9136955 9136976 GTGAGCTTATAAGTACTGCCAC 59 NA Drosophila melanogaster 61 ry FBgn0003308 FBtr0082704 1 1 1 95 3R 8858522 8859351 GAAAGAAGGTGACCGAAGTG 58 8859409 8859427 CACATCCCAACTTCGTTCC 58 NA Drosophila melanogaster 61 CG10013 FBgn0038012 FBtr0082567 1 1 1 60 3R 8150623 8150641 TGCCAATGAGAACCTTGTG 58 8150665 8150683 ATTATCAGTCCTGGTGGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17738 FBgn0038009 FBtr0082565 3 1 1 60 3R 8096877 8096895 ATGGACGTCCCTTCTATGG 58 8096919 8096937 AAGGGTCTTCCGAAACCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301723,FBtr0301722 3 3 3 80 3R 7866395 7866414 AATTTAAGCGACCTTCAGCT 57 7866454 7866533 AATCCTTATTGTCCTCAGAGGT 58 NA Drosophila melanogaster 61 CG18347 FBgn0260743 FBtr0082484 1 1 1 80 3R 7796686 7796766 GATTGTATCACTAAGACACTGAAGC 60 7796803 7796822 AGCAATCACAATCATTCGGC 59 NA Drosophila melanogaster 61 CG14712 FBgn0037924 FBtr0082418 2 1 1 80 3R 7454727 7454812 CGTCGCTGTTAAACAATCGT 59 7454854 7454873 CATTGAGCGAGGTATTCGAC 58 NA Drosophila melanogaster 61 CG33631 FBgn0053631 FBtr0091608 2 1 1 81 3R 5889774 5889794 GTAAATGGCAATGGAACTGAC 57 5889834 5889906 GAATACGAAGTATCGGTTTCTG 57 NA Drosophila melanogaster 61 MBD-like FBgn0027950 FBtr0082069 2 1 2 60 3R 5385743 5386005 TTCTACTACAGTCCCACAGG 58 5386028 5386046 CAGGGATTGCAATGTCCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0290324,FBtr0081784 1 2 2 80 3R 3828158 3828284 ACGTATACGTGCTCATTTCC 58 3828327 3828345 AGTGGGCACTATTCTCTGG 58 NA Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 2 2 2 85 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365153 3365171 GCACTGGAGCTCTTTACAC 58 NA Drosophila melanogaster 61 CG2051 FBgn0037376 FBtr0078670 2 1 1 81 3R 1613834 1613948 GTGTTACTTCTTGAGCTACGA 57 1613773 1613792 GTATACGGTGGTGTAACCAG 57 NA Drosophila melanogaster 61 snoRNA:Me28S-A30 FBgn0086081 FBtr0114357 3 1 1 60 3L 17996119 17996139 AGGTGTTATTGGGACTTACCT 58 17996079 17996097 TTCTCAGACAGTTTCCCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:E4:62Ae FBgn0011855 FBtr0072691 1 1 1 60 3L 1401789 1401810 TGTCTAGTGGTTAGGATATCCG 58 1401831 1401849 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12460 FBgn0040045 FBtr0302384 3 1 1 138 3L 24527954 24527976 CGGAAATTAGGGAAATGATCCAG 59 24528074 24528195 CCAGAAATGCTTCGCAAGG 59 NA Drosophila melanogaster 61 CG11425 FBgn0037167 FBtr0078507 2 1 1 60 3L 22468409 22468427 GTGTCGGCCAAATCTTTCG 59 22468450 22468469 AAAGGACACGTTTACGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33286 FBgn0053286 FBtr0113459 3 1 1 80 3L 20964099 20964175 GAAACATCGGCAACTTTACG 58 20964038 20964058 AATCCTTATTTCGCACCTCTG 58 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 2 1 1 63 3L 19807934 19807953 ATCCTCACTGGAACAGTGTC 59 19807820 19807908 CTTAACGGGCAACATGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7271 FBgn0036791 FBtr0075101 3 1 1 69 3L 18581989 18582007 TTTACCGACGAAGAGACCA 58 18582040 18582058 CACATTCGTGTAACTGGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13048 FBgn0036593 FBtr0075475 3 1 1 60 3L 16276606 16276625 ACTACAATCACTTCGATCCC 57 16276565 16276583 AAGTGGCTCAGATGATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13074 FBgn0036567 FBtr0075496 2 1 1 118 3L 16089249 16089267 CCAATGATGGGTCACTGGA 59 16089089 16089169 AATTAACCAGCGTCCATTGTC 59 NA Drosophila melanogaster 61 CG5931 FBgn0036548 FBtr0075527 2 1 1 80 3L 15959949 15960024 GCAGAGAATCTAGCCAACG 58 15959887 15959907 ATACGCATCTATGTCCAGAGG 59 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075692 3 1 2 157 3L 14788829 14788978 CCAATGATTCTACAAGGATCATCC 59 14789092 14789112 AGTAGTGAAGAAGGTCAAGGG 59 NA Drosophila melanogaster 61 CG14118 FBgn0036323 FBtr0075870 2 1 1 63 3L 12885953 12886435 TCATCAAGGTTCTCCCTGC 59 12886461 12886480 CTGCACTTTATCCAAACGGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14119 FBgn0036322 FBtr0075869 1 1 1 60 3L 12885017 12885035 GGAGGTGGAACTATGGGTG 59 12885056 12885077 CCATTGGCAGGATTATTAAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsp2 FBgn0002565 FBtr0089324 2 1 1 60 3L 12123205 12123227 CTACTTCAATCTGGACTATCCGT 59 12123245 12123265 CTTGTTAAGGACATGCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075,FBtr0076076 1 2 2 80 3L 11821207 11821297 CATGACGCTGTATATTTCCGA 58 11821147 11821166 GCGGATGACATAAGTGATGG 58 NA Drosophila melanogaster 61 CG32095 FBgn0052095 FBtr0076077 1 1 1 60 3L 11818539 11818557 GAGATGCACTCGAACTACC 57 11818497 11818515 CGACTTGGGAATGCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784,FBtr0301967 3 5 5 82 3L 11108870 11108890 GCTCCAAGATATTGTGTTGCA 59 11108672 11108829 AAATAATTTCGGGATCAGCAGC 59 NA Drosophila melanogaster 61 CG18180 FBgn0036024 FBtr0076389 3 1 1 60 3L 9634500 9634518 AGACATTGGTCTGATCCGC 59 9634540 9634560 AGGGATCTTGTTGATCAGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076673,FBtr0076669,FBtr0114549 3 4 9 268 3L 8351771 8351789 AATACCCACATCCACACCA 58 8350871 8350890 ACCAAGATCGTAGGTATGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7550 FBgn0035839 FBtr0076736 2 1 1 60 3L 8117149 8117167 CGAGGAACCCAAATTGGTC 58 8117107 8117129 TCTCTTTCTAGGAGTCAATGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16998 FBgn0035795 FBtr0076829 1 1 1 60 3L 7532560 7532581 CTTTGGGAGGAAATATTCAGGT 58 7532521 7532543 CGTGGAAGTATATTAAGACTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42660 FBgn0261536 FBtr0302558 1 1 1 80 3L 7458707 7458780 TTGCCGCAGGATTTAATGG 58 7458823 7458842 GCATAACATGATGGTGACCC 59 NA Nonspecific Drosophila melanogaster 61 Cdc27 FBgn0012058 FBtr0076890 2 1 1 60 3L 7241635 7241653 CTACGACTTCAAGGATGCC 58 7241524 7241611 GTCGCTCTCCACTTCTGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 3 4 4 93 3L 5921732 5921814 ACGTACAAGATCCAAACCAC 58 5921870 5921888 ATATGTTGATGGTGGCCTC 57 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 2 4 4 80 3L 5921671 5921691 CTTCAATTCCAAGAATGCGGA 59 5921731 5921814 GTGGTTTGGATCTTGTACGTC 59 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 1 3 3 80 3L 5753886 5753963 GAAATCACTTTGGACCAGGA 57 5754003 5754024 ATAGCTCAGTTTGTCTATTGGG 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0114646 3 3 8 82 3L 5661230 5661800 CCATCTATTGAGTTCGTTCAGG 59 5661843 5661861 CTTGTTGCCATTTGACGGT 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 3 4 12 62 3L 2461252 2465104 GATAGATGCGGAATTCGGA 57 2465128 2465148 ATTCCCGTCTTAAGAATGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 Cdc37 FBgn0011573 FBtr0072777 1 1 1 80 3L 1795984 1796183 GGAGGCCCTGAAGAAAGAG 60 1796224 1796245 TTCTTAATCATCTCGCTCTCGA 59 NA Drosophila melanogaster 61 CG9168 FBgn0035216 FBtr0072692 1 1 1 76 3L 1411421 1411439 TATCAGGTGATAGGTCGCA 58 1411528 1411547 CTCAAGGGTTGTAGTTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 mtacp1 FBgn0011361 FBtr0072676 2 1 2 115 3L 1331067 1331085 AATTGGTGCGCAGATACTC 58 1331164 1331291 CTCAACGTTGAGCTTGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi18S-1389b FBgn0083045 FBtr0113526 2 1 1 60 2R 17221731 17221749 TCGTATGAGGCTTTCAGAC 57 17221773 17221791 TGAGTGATACAATCGTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1389b FBgn0083045 FBtr0113526 1 1 1 60 2R 17221699 17221718 GAAGTGAGTGTTGCCAAGAG 59 17221739 17221759 CCTCAACTATGTCTGAAAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33384 FBgn0053384 FBtr0086376 1 1 1 60 2R 15642264 15642282 ATACATCGGTTCTCGTCCG 59 15642222 15642240 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112,FBtr0072114 1 2 2 204 2R 19435018 19435036 ACTTTCTCATCTCGGCCTG 59 19433334 19433352 TGGAAGCTGTGTATCTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3906 FBgn0034871 FBtr0072121 2 1 1 119 2R 19399190 19399208 GGAGGTGCACAACTATGTG 58 19398998 19399107 TCGCGCTTGTTAATGTTGG 59 NA Drosophila melanogaster 61 CG30411 FBgn0050411 FBtr0072016 1 1 1 206 2R 19303630 19303648 ATGTTCGGGATGTTTCCGA 59 19303818 19303899 GTTATCGCTGGCTTTCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 1 4 4 111 2R 19275104 19275122 CACCTTCGACAACAGAAGC 59 19275256 19275274 TTAGTCTGTACCTGGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 fd59A FBgn0004896 FBtr0071898 2 1 1 93 2R 18756298 18756316 GCTCTAATCACCATGGCCA 59 18756373 18756711 TGTAGTATGGAAAGCGCGA 59 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 3 2 2 62 2R 17974259 17974278 ATCAAGAATGCCAATCCCGA 59 17974054 17974234 GCTATTCAGCTCAAGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34029 FBgn0054029 FBtr0100084 2 1 1 181 2R 17858674 17858751 GCCTGATTTGTGGACATGG 59 17858511 17858529 TAAACTTGCGACATTTCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4021 FBgn0034659 FBtr0071716 1 1 1 80 2R 17662012 17662102 AGTACAGCATACAACGTCCA 59 17662144 17662163 GCACAGGTTTCATGTCAGTC 59 NA Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 1 2 2 80 2R 17037702 17037783 AAGTGGAACAAGAGTACCG 57 17037640 17037661 TTAATAGAATCTCGGGATCAGG 57 NA Drosophila melanogaster 61 CG17999 FBgn0034552 FBtr0071561 1 1 1 80 2R 16736474 16736631 TCTGTAACTGCAAGAATCCG 58 16736413 16736432 TTCCCGATATCCAGTAGAGG 57 NA Drosophila melanogaster 61 CG15124 FBgn0034461 FBtr0086470 2 1 1 60 2R 15530949 15530968 CGCTTTATTGCGAAATCCTG 58 15530991 15531009 CTCTCCAAATAGGCGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086711,FBtr0086712 3 2 2 86 2R 14511076 14511155 AGAAATCTGCTGTCCTGGG 59 14511008 14511026 GAGATTCTGACGCACTGGA 59 NA Drosophila melanogaster 61 CG5226 FBgn0034355 FBtr0086698 2 1 1 61 2R 14409897 14409920 GGTCTTCATGGTCATTAGAAATCC 59 14409939 14410031 CAATCATACCCAAATCGGCA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG15065 FBgn0040734 FBtr0086667 3 1 1 62 2R 14277496 14277514 GAAGTGGATGTCCTTGGTC 57 14277540 14277624 TTTAACGGAGAAGCCACTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 2 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18432 FBgn0034238 FBtr0086943 2 1 1 82 2R 13428253 13428273 ATCTCCAGATATCCATCAACG 57 13428315 13428393 CTCGTAGAGCCATATGTTGAG 58 NA Drosophila melanogaster 61 CG34192 FBgn0085221 FBtr0112385 3 1 1 107 2R 13343648 13343666 ATGTTTCCGGATCTTCCAC 57 13343500 13343520 GTTGAGGATCACTACATCTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8388 FBgn0034062 FBtr0087263 1 1 1 80 2R 11898652 11898733 CTGGCTTCAGATCCCTGAC 59 11898590 11898610 AAGTTGTGAAAGAGCAGTAGC 58 NA Drosophila melanogaster 61 ATPCL FBgn0020236 FBtr0300598,FBtr0300596,FBtr0300597 1 3 3 80 2R 11882020 11882038 TATCCTCAATGTGGACGGT 58 11881893 11881978 GCTTCCTCACTGGTAAATGAG 58 NA Drosophila melanogaster 61 CG33467 FBgn0053467 FBtr0089861 2 1 1 127 2R 10943348 10943366 CGCGACTTTCAAGTTATGC 57 10943175 10943257 CGTTCCTTGCACTTAACGA 58 NA Drosophila melanogaster 61 CG17389 FBgn0033938 FBtr0087490 3 1 1 83 2R 10336447 10336911 GTAATGCCAAGTTGTGCCA 59 10336958 10336976 GACTGAGTAGCTCGTCGTC 59 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 1 4 4 80 2R 9074535 9074555 ATATTTGCGCCACAAGATGAC 59 9074417 9074494 TCCTGCGTGATCTTACTGAC 59 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 3 8 8 94 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560463 8560482 TGACGAAACTCGTAAAGTCG 58 NA Drosophila melanogaster 61 CG13165 FBgn0033707 FBtr0087892 2 1 1 82 2R 8184837 8185030 TTGTACAGGTACCTGCCAC 59 8185075 8185094 TACATCTTGTCGCCCTTCTG 59 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015 3 1 3 106 2R 8055705 8055942 CTACACCATGTTGTGCGAC 59 8055617 8055635 AAGACGAAGTCGAGATGGT 58 NA InUTR Drosophila melanogaster 61 CG34230 FBgn0085259 FBtr0112423 3 1 1 126 2R 7749184 7749203 TTACCTCTCAGTTTCCTGCC 59 7749290 7749366 AAAGTACAAGCCTAGAAGGGA 58 NA Drosophila melanogaster 61 epsilonTry FBgn0010425 FBtr0088160 1 1 1 60 2R 7233022 7233043 TGATCTGGAGATCATCGATGTG 59 7232983 7233003 CTTCTTTCCGTATCCGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 etaTry FBgn0011554 FBtr0088163 2 1 1 60 2R 7228431 7228451 GGTTATACCAAAGAGAACGGC 59 7228391 7228411 CAATTGGTACCTTAACCTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12343 FBgn0033556 FBtr0088247 2 1 1 60 2R 6710220 6710238 GAAGTACTCTCGCAGGAGG 59 6710178 6710196 CCTCTCGTTGATGAAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12934 FBgn0033541 FBtr0088213 2 1 1 60 2R 6536741 6536759 CAGCGATTGGAGTTTGAGG 58 6536782 6536801 CCAAATGTCCCTGAGGAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33475 FBgn0053475 FBtr0088318 2 1 1 60 2R 6298484 6298505 TTGATATCCAAGGTTTACTCGG 58 6298445 6298464 TAAATACCGTGGAATTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-SC2 FBgn0043575 FBtr0088709 2 1 1 60 2R 4604814 4604832 TCTATCGGCATCTCCTTCC 58 4604856 4604874 TGATCTGAGCAGAGGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8690 FBgn0033297 FBtr0088752 1 1 1 84 2R 4361093 4361171 GTCCAACGATCTCTGACCA 59 4361219 4361237 ACTGACTCAAGTCAACGGT 58 NA Drosophila melanogaster 61 LvpD FBgn0002569 FBtr0088747 1 1 1 99 2R 4342565 4342583 AACTTAAGAGCAGTTCCGC 58 4342645 4342725 TTGTTTGTGCGAATGATCTG 57 NA Drosophila melanogaster 61 dpn FBgn0010109 FBtr0088803 3 1 1 95 2R 4119187 4119436 CTTAGAAAGACCAACAAACCGA 59 4119113 4119131 CATCGCCTCCAGGATAAGG 59 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 2 3 3 99 2R 2884361 2884442 ATGTCCATGACGTACTCGA 58 2884504 2884523 TGATCTCCAGGTACTTGTCC 58 NA Drosophila melanogaster 61 CG14470 FBgn0033046 FBtr0086049 1 1 1 60 2R 1816189 1816208 ACTTACAGCTACCATTTCGG 57 1816231 1816249 GGTACTTGTTACTGGCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Stlk FBgn0046692 FBtr0111111 1 1 2 80 2R 434548 447874 TGTATACTTCTGGGTTTCCGG 59 447911 447934 CGGAGTGAATATAAGTAAGTGCTG 59 NA Drosophila melanogaster 61 His4:CG33889 FBgn0053889 FBtr0091893 1 1 1 60 2L 21484229 21484247 CGTAATTCGTGATGCCGTG 59 21484187 21484206 CATGGCTGTAACTGTCTTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13078 FBgn0032809 FBtr0081256 2 1 1 60 2L 19564929 19564948 ACTATGGTCCTAATGGTCCT 57 19564970 19564989 CAATCTTCTGGTAGAGCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Idgf2 FBgn0020415 FBtr0080861 2 1 1 84 2L 16447492 16449190 TTACACCAGGGAAGGTCTG 58 16449238 16449256 ATAGCCGTAGACCAAGTGG 58 NA Drosophila melanogaster 61 esg FBgn0001981 FBtr0080734 2 1 1 60 2L 15334622 15334643 CCACATCATTACCTTCATGGTC 59 15334663 15334682 TGATTTCAGATCTCATGGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4701 FBgn0028868 FBtr0080672 1 1 1 60 2L 14766642 14766661 AACCGCCATGATTAAGACTC 58 14766682 14766702 GTTGGTATTGCTCATTAACCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16884 FBgn0028544 FBtr0080557 2 1 1 93 2L 13946038 13947097 AAAGTATTCATCTGCTTAGCCG 59 13945966 13945984 TGTCCAGCTTCTTCTCCAG 59 NA Drosophila melanogaster 61 CG33645 FBgn0053645 FBtr0091622 2 1 1 193 2L 13533028 13533046 GATATTACCGTGCATGCCG 59 13533258 13533276 TTCTGTGGTGGAGTTAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33640 FBgn0053640 FBtr0091617 1 1 1 116 2L 13528119 13528139 TTGTTCGGTACTCAACAATGG 58 13528217 13528416 TCTATGTAGGTCACCGGCT 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0113039,FBtr0089910,FBtr0113040 1 4 9 108 2L 13261685 13271306 AGTTCTGGGTATGGACAGC 59 13271378 13271396 AGGTGAAGGGCTTCTTGTC 59 NA Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271,FBtr0080272 2 2 2 60 2L 11586263 11586284 TGAACTTTCTCCAGGATTTCTC 58 11586224 11586242 TGCTGAATACTTTCTCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5091 FBgn0032234 FBtr0080005 3 1 1 148 2L 10381312 10381385 TTTCATTTCAAGTGCACGAG 57 10381494 10381514 CACCAACAATTCATCTCTTGC 58 NA Drosophila melanogaster 61 CG5381 FBgn0032218 FBtr0080060 3 1 1 80 2L 10319557 10319635 ACGCGATCTAAACGATAATTCC 59 10319498 10319521 CTATCAATATCTTGCAGGGATGTG 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 2 4 5 88 2L 9272528 9272549 GACGCATTAAAGAAGCAAATCG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 1 3 3 80 2L 8564225 8564244 TTACAGTCCTCGTGATTGGT 58 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 Chrac-14 FBgn0043002 FBtr0100268,FBtr0100267 1 2 2 60 2L 8437632 8437650 TGTTTGCCATCTTCGTGAC 58 8437673 8437692 GTCTTGTGGTTCTGCTTGTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5261 FBgn0031912 FBtr0079445,FBtr0079444 1 2 2 83 2L 7429092 7429172 CCAAGTGGATAAGCTGCTG 58 7429219 7429237 AAGTCGTTTACAGAGACGC 57 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 1 2 2 80 2L 6457042 6457060 ATGTGGAATTGCAGAGCCT 59 6457101 6457346 AATAGGGACCTGTAAGAACTCC 59 NA Drosophila melanogaster 61 CG9505 FBgn0031805 FBtr0079253 2 1 1 60 2L 6369131 6369151 GGAAGGAACTGTATTCGTCAC 59 6369173 6369191 CGTAGACGTAGTTCATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 3 3 3 118 2L 6095044 6095062 GCTAACTACGATGACACCC 57 6095143 6095246 AGAGCGGATTCATATTTGGG 57 NA Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 2 2 3 92 2L 5071021 5071111 TTTCCGGCGTAATACTGCT 59 5071235 5071254 CGATTCCAACCTTCTTGGTG 59 NA InUTR Drosophila melanogaster 61 CG31918 FBgn0031678 FBtr0079028 2 1 1 60 2L 5057424 5057446 CTAGGGCAGTTGGAAATTTATGG 59 5057386 5057404 GTCCGAAGACGATCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079011,FBtr0079010 1 2 2 61 2L 5055525 5055633 CATTGGAGCCCTACAGGAG 59 5055658 5055676 GATTGGTGTCCTCGAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 Cf2 FBgn0000286 FBtr0089649 2 1 3 75 2L 4879195 4880310 TTTAACGACTCACACGGGA 59 4879138 4879156 CAGATAGTCCTTCACGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG34393 FBgn0085422 FBtr0112637 1 1 1 80 2L 3189487 3189990 CTCGATAAGCAGAAGAAGTGG 58 3189427 3189445 GTTGCACGTCTTCTTTGGA 58 NA Drosophila melanogaster 61 CG8814 FBgn0031478 FBtr0077629 1 1 1 121 2L 2875257 2875397 ATAATTAGGTATGGCGGCGA 59 2875481 2875499 ACAGCCCGTAGAACTTGAG 59 NA InUTR Drosophila melanogaster 61 GlyP FBgn0004507 FBtr0100485,FBtr0077828 3 2 2 80 2L 2134953 2135043 TCAACCTCAAGTTCTTCAACG 58 2135085 2135103 GGACACGTGAGATGTTCTC 58 NA Drosophila melanogaster 61 c-cup FBgn0031367 FBtr0077894 1 1 1 83 2L 1832361 1832436 ATGTTTCCTGCAAAGCTGG 59 1832296 1832314 AAAGGAGACTAACGCCTGG 59 NA Drosophila melanogaster 61 CG3883 FBgn0031281 FBtr0078041 2 1 1 81 2L 815216 815290 CTGGGAGCTGATCAATAATGTC 59 815156 815174 TAGCACTTCGTTCACCAGG 59 NA Drosophila melanogaster 61 CG13689 FBgn0031270 FBtr0078071 3 1 1 80 2L 602998 603085 TGGCTCAAATATACCAAAGCC 58 603125 603145 CCAGATTCGGATTAACCTCAG 58 NA Drosophila melanogaster 61 crq FBgn0015924 FBtr0078088,FBtr0078087 3 2 2 116 2L 450530 450673 TAGAGGATGGCCTTACCCT 59 450432 450450 TTATGTCCTCGGGATTCGT 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089429,FBtr0089430,FBtr0089432,FBtr0089433,FBtr0089434,FBtr0089437 3 6 10 91 2L 110796 110814 ATCACGTCTAAGGCTGTGG 59 110868 111916 AAATCGAAACCCTTGGAGGA 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 1 7 8 80 2L 119224 119297 TATAATGCAGACTGATGTCCTG 57 119165 119184 TTTCCCAACTTCAAGTTTGC 57 NA Drosophila melanogaster 61 Ent1 FBgn0031250 FBtr0078095,FBtr0078094 2 2 2 80 2L 357476 357494 ACCTACCTCGTGTTCTACC 58 357183 357432 CTTCCAGTAATCTTCCGCA 57 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 1 3 3 84 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831772 831790 TACATGTTCTGCTCCACGT 59 NA Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 2 2 2 80 2L 1016072 1016153 GTTCGTCAAGAACCCAATCG 59 1016011 1016031 CCCTGCATGTGTAGTATTTGC 59 NA Drosophila melanogaster 61 halo FBgn0001174 FBtr0077918,FBtr0114554 2 2 2 60 2L 1517929 1517948 GAAGATGTCCACCATCAAGC 59 1517888 1517906 GTTCTTGATCGTCTGCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 2 2 2 80 2L 1747845 1748777 GCTGTGGTCTTGACATTTCC 59 1748819 1748838 GTAGGGACCCAGTTTGTACC 59 NA Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301066 3 1 3 157 2L 2024117 2024136 CTATAAGGGACGTCCTCCAG 58 2024254 2026776 AGGAGATTCCCATTGATTCAC 57 NA Drosophila melanogaster 61 Su(dx) FBgn0003557 FBtr0077824,FBtr0077823,FBtr0077822 1 3 3 80 2L 2040348 2040429 TTCACAGTGCTGATTACACC 58 2040472 2040490 AAGCATGGCATCTTTACGG 58 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 3 4 4 89 2L 2223626 2223718 AGATTACGAGACAAAGACAGTG 58 2223767 2223786 CTTGATAAGCAGAGCTCGAG 58 NA Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 1 4 4 87 2L 2224614 2224633 AATCTACCATCCAGACGGAG 58 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 CG31682 FBgn0051682 FBtr0077807 2 1 1 60 2L 2240341 2240360 GAAGGAAACTGTACGCACTG 59 2240228 2240248 TCGAATTCTGAGTTATCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG3214 FBgn0031436 FBtr0077745,FBtr0273393 1 2 2 80 2L 2579904 2579923 CAAAGCTGTTCCAGATGGTC 59 2579780 2579867 TCTTCAGATCATCGTTCCTATAGAG 59 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 3 4 4 81 2L 2738319 2738337 CACGGAATACATGCGACTG 59 2738380 2738464 CTTCAGGTAGGTAAGAGTCCA 58 NA Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 2 2 2 82 2L 2810574 2810592 GATCAGCAGAAGGACTCCA 58 2810637 2811161 TTCATCCACTCATCTTGCAC 58 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 2 2 2 116 2L 2975183 2975204 GTTAATGAAGACACATGCTCCT 58 2975017 2975036 CCGTTGTCATGTCATTTCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 3 3 3 92 2L 3017842 3017863 TCGGATTATTTATACCACCTGG 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 3 6 10 168 2L 3499756 3500011 GCTGGACAAACTCAACCTC 58 3499606 3499624 ATCCACCTCGGGTATAAGG 58 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 3 4 4 81 2L 3780567 3781913 TGAGGGATCACAGGTATATTCAC 59 3781953 3781972 GTTCTCGATTGGCAGAATCC 59 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0077434 2 1 2 84 2L 4401680 4401871 TATTTACCCGCAAGGAATCG 58 4401917 4401936 GTGATCATGATTGTGTCCCT 57 NA Drosophila melanogaster 61 SP555 FBgn0260470 FBtr0079004 2 1 2 61 2L 5039982 5040000 CGACTATCTGAGCGAGGTG 59 5040025 5040135 TCTCCAGCTGATTCACCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 2 6 6 62 2L 5041693 5041713 AAGCCTGGATATTAAGGTCCT 58 5041502 5041520 CTTCAAATCGATCAGCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 RpL37A FBgn0028696 FBtr0079016,FBtr0302570 1 2 3 91 2L 5071021 5071111 TTTCCGGCGTAATACTGCT 59 5071234 5071253 GATTCCAACCTTCTTGGTGC 59 NA InUTR Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 2 4 5 112 2L 5277019 5277037 TACGAGTTATCCGTCACGG 59 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 eIF-4a FBgn0001942 FBtr0079178,FBtr0079175,FBtr0079177,FBtr0079176 2 4 4 111 2L 5984933 5985036 ACATTCATAGAATTGGTCGCG 59 5985104 5985127 GTGTGGTAGAACTGTTCAATATCC 59 NA Drosophila melanogaster 61 CG9135 FBgn0031769 FBtr0079186,FBtr0079185 1 2 2 135 2L 6051897 6051915 AAGACTCCAGGTCAGATGC 59 6052010 6052089 CATATCGGTACTTCTCTTCTGTG 58 NA Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0110978,FBtr0079401 3 2 3 82 2L 7059191 7060979 AGGAGGAGAAATCCAAGAACTC 59 7061021 7061040 CGGATTGAGAATCTTCTCGC 58 NA Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 1 2 2 110 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312915 7312933 TGCAGGACTCTATCGTTCC 58 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 3 4 4 80 2L 7444384 7444469 TTATCGATATGGAAGGGCTG 57 7444510 7444530 GAATGTAATCCAGCAACATGG 57 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112605 2 1 4 140 2L 7536465 7543993 AAGAATCTGCTACGTCAGCA 59 7536344 7536362 CTCGAAGAGATCCTGGGTG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079574 3 1 9 102 2L 8103491 8105698 CCCGTCAAGATGGATAAGCT 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG14277 FBgn0032008 FBtr0079595 3 1 1 60 2L 8243165 8243183 CTGAGGTCAAGCATGACAC 58 8243268 8243288 TTCTTGGTGATCTCGATTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 2 3 3 118 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674362 8674773 ATCATAGATTCGCGACACG 57 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079747,FBtr0079749,FBtr0079748,FBtr0112846 2 4 4 98 2L 8688852 8688933 TTCTTCGATCCCAATGCCA 59 8688772 8688793 CCGATCTGATATGTAGTCCTCG 59 NA Drosophila melanogaster 61 Tsp29Fb FBgn0032075 FBtr0273420,FBtr0079755,FBtr0079756 2 3 3 80 2L 8939010 8939121 GACTTCATGCAATCTATGCTAGAG 59 8939160 8939178 GTTCACATTGGCGGATAGG 58 NA Drosophila melanogaster 61 CG31720 FBgn0051720 FBtr0301973,FBtr0301974 1 2 2 80 2L 10236972 10236993 GGAACCGATTTCAAATTTGAGG 58 10236534 10236933 AACAATACCGAAATCTGAGGG 58 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 7 7 83 2L 10259082 10259101 GTTGATATGTGGCTCAAGGA 57 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 1 2 2 80 2L 10383734 10383754 AAATATGCGACGAACTTGACC 59 10383795 10383879 AGGTGGAAATACATTGTCGC 58 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080031 3 1 2 97 2L 10459266 10459665 AATGTTAAAGAGCGCGTGG 59 10459725 10459744 AAATCCTCACCCATGGTCAG 59 NA Drosophila melanogaster 61 RluA-1 FBgn0051719 FBtr0080040,FBtr0080039,FBtr0080041 3 3 3 80 2L 10464362 10464380 TCCATGTTCAAGAGCACCA 59 10464238 10464319 ATCGCTATGATGAACAACGG 58 NA Drosophila melanogaster 61 Myo31DF FBgn0086347 FBtr0080035,FBtr0080036 2 2 2 83 2L 10492840 10492858 GACCATCCACAAACTGGAC 58 10492701 10492793 CTAATGGACGTCAACTCCC 57 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 2 5 5 80 2L 10993661 10993749 AGACCGGAATGAGTATGTGG 59 10993790 10993810 TCATCCTCGGCTATGATAAGG 59 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300537 2 1 4 110 2L 11165642 11165661 AAGACTGTATGGCACAAAGG 58 11165404 11165569 GAAGGGAGTACCTCAGGTG 58 NA Drosophila melanogaster 61 vir-1 FBgn0043841 FBtr0080390,FBtr0080389 2 2 4 92 2L 12404174 12407199 ATTGATGAGCCCAAGTCCA 59 12404100 12404118 GGAAGCTTCGAATTCGGAG 58 NA Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 3 1 1 85 2L 12427507 12427526 GAACTACTCCCTGAACAGCA 59 12427360 12427378 CCTGAACGTTCTGCAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0299657 1 1 8 60 2L 12460598 12460616 CTGCTATGTGATGGTGCCT 59 12458191 12458209 CACCGCTATCATGAGATGC 58 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090025,FBtr0090020 3 2 17 127 2L 12727002 12727021 CAAATCGGCTCGAATCTGTG 59 12727111 12737410 AATGACGTGAAACCTTGGC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090017,FBtr0090013,FBtr0090018,FBtr0090016,FBtr0090015,FBtr0090019,FBtr0090027,FBtr0090020 3 9 17 124 2L 12724233 12724251 AGTTTCGAGAAGCAAGTGC 58 12724339 12724485 GTGACCAAGGAAACCAGGA 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0114471,FBtr0302141,FBtr0302138 1 3 9 80 2L 13274310 13274331 GAGCGTATCATACCGATAACTC 58 13274372 13276260 GGAGACTCCATTACCACCA 58 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462 1 1 2 86 2L 13296734 13297626 GTATCTCTTTAGCTGCTGGC 58 13297675 13297693 TTCTCCGTATTGACCCGTC 59 NA Drosophila melanogaster 61 CG31731 FBgn0028539 FBtr0080535 2 1 3 99 2L 13785506 13785800 ATTTGCTTCCACTCAGATCG 58 13785862 13785880 AGACGAGAACCACGTAGAC 58 NA Drosophila melanogaster 61 Ance FBgn0012037 FBtr0080553,FBtr0080552 3 2 2 81 2L 13908723 13908741 CAATGTGGAGTTGCCTCTG 58 13908786 13908871 CATGGACAGCATGTTGTGG 59 NA Drosophila melanogaster 61 CG32972 FBgn0028905 FBtr0080599,FBtr0080600 3 2 2 81 2L 14164243 14164317 AGAGCAAGGGTGTCAAGAC 59 14164180 14164202 TTCTCCAGTGTATCAGAATCCAG 59 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 1 5 5 80 2L 14324567 14324587 CGTAAACATTCACTTGCTTCC 58 14324629 14324703 GTTCCCGAAGTGAAACCTG 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 3 2 3 113 2L 15714208 15714227 AACATTGGAGCTGCTTTGTG 59 15708026 15714132 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 CG12455 FBgn0028859 FBtr0080823 2 1 2 84 2L 16239552 16239574 CCCTGCTATAAGCTCAATATGAG 58 16239616 16239825 TGTACAGTTCCTCATCTTCGT 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442 2 8 10 107 2L 17394484 17400408 CTTATACAGATAACAGCAGCGC 59 17400475 17400494 CAATGAAGGCAATCTGTCCG 59 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0113042 2 1 2 112 2L 18698745 18698844 CATTCAACGCATGGAGAGTG 59 18698917 18698937 CCTTCAAGGTGCTATGTTTCC 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120,FBtr0273228 2 2 2 87 2L 18836577 18836595 GATGATCGAGGATCGGACC 59 18836434 18836527 TTTCAGTATGCCAACTGCTG 58 NA Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 2 3 3 294 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117849 19117867 ATCCATCATGACCACCTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 2 2 2 79 2L 19417485 19417504 TTACATTGCTGGTCATAGCA 57 19417545 19417633 ACCAAACGTATTTCCTTCGT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 1 2 2 60 2L 19418373 19418391 TCGGCTACGACAAGTACAC 59 19418477 19418495 TCAACGGTCAAGTTGTACG 58 NA DesignNoJunction Drosophila melanogaster 61 ref(2)P FBgn0003231 FBtr0081253,FBtr0100289 3 2 2 92 2L 19542910 19542928 ATATTGCGTCGCGAAATCG 59 19542982 19543633 ATCTTTATCAGCGTCGATCCA 59 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 2 3 3 89 2L 19733220 19733238 CAAACGTTTCCGAACTCCT 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 1 5 5 87 2L 20826080 20826643 ATCGACAATGACAAGTGGG 57 20826694 20826712 CAAAGCCGTAGAATCCCAC 58 NA Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 2 2 2 80 2L 21660049 21660127 TGCACCAATTGTACATCTACC 58 21660167 21660187 GATTACCGTAGAACGATTCCG 58 NA Drosophila melanogaster 61 CG6448 FBgn0032976 FBtr0113044,FBtr0085939,FBtr0085938 2 3 4 98 2L 22141682 22141701 TGATTGTAAGCCTAGATCGC 57 22141759 22141845 CAGCATCGATATCCTTAATCGT 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 3 3 4 97 2R 1414858 1414876 GGACATCCTAATGGCTACG 57 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 3 6 6 85 2R 1591878 1591948 CAATTCGAGGGTCTTTGCC 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 2 3 3 162 2R 1969442 1969460 TCTAAGCGTCCAGAATCGG 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 1 3 6 101 2R 2039490 2039581 CTTGATGTTACCGAGGACTG 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 2 6 6 85 2R 2141684 2141702 TCGCAAATACCAGGAGGAG 59 2141750 2142359 CCAAGTAACCCTGAATGTCG 58 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 2 3 3 136 2R 2554510 2554590 ATCCGCATGAAATTACTGTCAC 59 2554687 2554705 GGTGTTGAGCATGTTGTCG 59 NA Drosophila melanogaster 61 CG3271 FBgn0033088 FBtr0086118,FBtr0086119 3 2 2 99 2R 2561685 2561774 TATTCGCAGTGACGAGTCTC 59 2561835 2561854 GAATAGGCAAAGGCGTAGTC 58 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086202,FBtr0086199,FBtr0086200 3 5 11 143 2R 2764835 2764853 GATGTTCTCCGATCAGGCT 59 2764223 2764728 TAGCACATGACCATTCCCG 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 1 3 3 159 2R 3106665 3107971 GATAACGAGGTTCGTTACTGTC 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 1 2 59 81 2R 3249269 3249288 GAACCAAACATCGTCTGACC 59 3247695 3249225 ATACTGCCAACAGGCTCTG 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088940 1 1 5 86 2R 3569105 3569123 TTATAAGGCGTGTCCGGAC 59 3568967 3569059 TCGATCTCATTCTTAGGAGACTG 59 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 3 3 3 80 2R 3858088 3858108 AACAAGTGGCTACATATGGGA 59 3857971 3858049 GTAGATGACCATATGCGTATCC 58 NA Drosophila melanogaster 61 CG17977 FBgn0040778 FBtr0088826 3 1 1 91 2R 3954878 3954896 CTTTCCAATCTGGATGCGA 57 3954756 3954774 CTATTCGACCTTCTGGCCT 58 NA DesignNoJunction Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 1 2 2 60 2R 4126151 4126169 GCGTCAATCTGACACTCAC 59 4126193 4126211 CTGTTGTCAACGGCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30359 FBgn0050359 FBtr0088749,FBtr0300953 2 2 2 83 2R 4351580 4351659 AACTGGGTGTTGGGTAACC 59 4351704 4351724 AGTGAGCATGTTTAGCATGTC 59 NA Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0290113 1 2 3 97 2R 4505959 4506035 CAGTTACGTTCGCAATACAG 57 4506095 4506113 AGATCACCTTGCTGTTCAG 57 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 2 2 3 112 2R 4607432 4607450 TACACCGTGGATCTGAGTG 58 4607280 4607356 TCGAAGTTCTGGTAACGCT 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 2 4 5 95 2R 4788973 4788992 TTTAGCCCGTAGAGTTCGAG 59 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 3 2 2 69 2R 4996589 4996607 TTTGACTCCATGAACGAGC 58 4996474 4996494 ACTGTTCCTTGATGTACTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Phax FBgn0033380 FBtr0088569,FBtr0088568 1 2 2 80 2R 5002676 5002752 GACGAATTACTTGTTCGAGTCG 59 5002793 5002811 TTCAATGCGCTGAGTTTCC 59 NA Drosophila melanogaster 61 ced-6 FBgn0029092 FBtr0088550,FBtr0088548,FBtr0088549 2 3 3 81 2R 5323910 5323929 TTCAAACAAATTGGCCTCGG 59 5323779 5323869 GGTGCTATCCATGTACTTTCTG 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112901 3 1 5 95 2R 5884716 5885218 AAGCTAGCATTCCTAGACAC 57 5884640 5884661 GAACATTTGCTCATAGATCACG 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0088341,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829 1 10 17 80 2R 6182434 6182453 CAGGTCATTCGTCTGTTTCC 59 6182814 6183256 GTTCTAGATTCCCGTTAAAGATGTC 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0088262,FBtr0088263 1 2 3 125 2R 6322085 6322165 CGAGGAAATGGATGTTTCCC 59 6322250 6322271 TCTTCAGTCATTAGGTTCTCCT 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089364,FBtr0089354 3 2 26 93 2R 6419606 6419624 CATATGCAACATGGCAGCA 59 6378544 6419549 GTCCAGTAGCCATCTTGGG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089728 1 2 3 80 2R 6773588 6773606 TATTGAGTCCGGAATGCAC 57 6773647 6773726 CATTGGGATAACACTTAGAGGG 58 NA Drosophila melanogaster 61 CG7777 FBgn0033635 FBtr0088136,FBtr0088137 1 2 2 80 2R 7327362 7327483 GGTCTCAATGAGCTCAAATCC 59 7327522 7327543 ATTGAGGATCAAATTGCCAAGG 59 NA Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088015,FBtr0088013,FBtr0088014 3 3 3 60 2R 8055513 8055532 AGAACAGATCACGATAGGGC 59 8055406 8055424 AGTCGACCGAAGACTTACG 59 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936 2 1 2 159 2R 8373444 8373464 GTTTCCTTAACTCAGAGGTGC 59 8373804 8374099 GATGTCAGTCGTAGACTTTCG 58 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 2 2 4 96 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464417 8464435 CAAGCAGCTTTGATCTCCG 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 1 6 6 153 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547878 8547967 CTTGTTCTCACTGCTCACG 58 NA Drosophila melanogaster 61 Mdr49 FBgn0004512 FBtr0087801 1 1 2 80 2R 8832633 8832653 GACTTTCAGCTTAAGGAAGGA 57 8832508 8832593 TCTGGTTGAGTATCTGAACAG 57 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 3 4 4 80 2R 9074416 9074493 TCAGTAAGATCACGCAGGAG 59 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 1 5 12 80 2R 9310224 9326126 GTCTCCTGAATACCTATGACGA 59 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705 1 1 6 80 2R 9331010 9331028 AGCCCTCAAGATCATCCTC 58 9330623 9330966 TCTCGATTGGCCCTAAGAG 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 2 5 5 150 2R 9426600 9426618 AGTCAGCCGTCTTAGAGGA 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 2 9 15 127 2R 9759583 9759601 ACCACAAGGAGTTCATGGA 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089258 1 1 2 80 2R 10389960 10390050 TTTGACTGCCTACAAGTTTACC 59 10389901 10389925 GAGATAGATTACAGCATTGACTGTC 59 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087413 2 1 2 84 2R 10927481 10927500 AACAAATCTCAGAGCGAAGC 59 10927547 10927652 GAACATCCGCCTTGTAGAC 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 1 4 6 80 2R 11152373 11152395 AACGACTATATGATTCTGGAGGG 59 11152254 11152335 TACACCAATCTCGAATCCCTG 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 1 4 6 80 2R 11152373 11152395 AACGACTATATGATTCTGGAGGG 59 11152254 11152335 TACACCAATCTCGAATCCCTG 59 NA Drosophila melanogaster 61 Arf51F FBgn0013750 FBtr0087377,FBtr0087375,FBtr0087379,FBtr0087376,FBtr0087378 3 5 5 81 2R 11211644 11211716 TGCCTGATGCAATGAAACC 59 11211759 11211779 GGTTGTACATACCAATTGCGA 59 NA Drosophila melanogaster 61 Rho1 FBgn0014020 FBtr0087212,FBtr0087211,FBtr0087217,FBtr0087215,FBtr0087213,FBtr0087216,FBtr0087214 1 7 7 80 2R 11993293 11993373 CACAATTCGGGATCTAGCA 57 11993417 11993435 GCATTAATCTTCTCGGCCA 58 NA Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 1 2 2 80 2R 12034718 12034736 CTGTAGTGCCATCATTGCA 58 12034592 12034675 ATGGAAAGGTGGATAAGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114472 1 1 3 127 2R 12085835 12086002 AATAAGAAGATTTCCGGCACTG 59 12086090 12086108 ATATAATTGGCCGGCTCCC 59 NA Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 2 5 5 82 2R 12093318 12093420 TGAAGTGAAGAAGGCATATCGA 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 2 3 4 85 2R 13309439 13311167 CCAATGGTCACATCGATGAC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 1 2 8 81 2R 13408423 13411599 GAATCTAACCGGTCCTAAACTC 58 13408363 13408383 ACAGTATTCAACGGCATTCAG 59 NA Drosophila melanogaster 61 CG5098 FBgn0034300 FBtr0113092,FBtr0086732 2 2 2 95 2R 13987029 13987047 CATGGTGAAGGGTCAGGAG 59 13987105 13987193 CGCTTACGTTTATGCATGCT 59 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 3 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305012 14305092 CGAATAGTGACCTTATCGCTC 58 NA Drosophila melanogaster 61 CG42306 FBgn0259202 FBtr0299689,FBtr0299688 3 2 2 60 2R 14547707 14547728 AGTCATTACGGAGAAGTTTGTC 58 14547598 14547619 CAATTTAAGCTCCTCGATTTCC 57 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 2 2 2 80 2R 14660396 14660474 TATGTCCAGAGCTGTTTCGA 58 14660516 14660535 GTAGACACAGGCGACTATCC 59 NA Drosophila melanogaster 61 l(2)08717 FBgn0010651 FBtr0086634,FBtr0086635 2 2 2 94 2R 14686294 14686595 GATTTCTTTAATTCCGAGCGCT 59 14686221 14686239 ACTTGGGTCACGATGTAGC 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 1 5 6 80 2R 15048910 15048989 CCATTCTCAAGGTCAATGGC 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 2 5 6 81 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049030 15049049 CACAATCTCAGCCTTCAGTG 59 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 2 2 4 82 2R 15196011 15196086 GCCAATGAGGTGATCTTCG 58 15195947 15195966 AGACCCTTCAATAGACCCTG 58 NA Drosophila melanogaster 61 CG11055 FBgn0034491 FBtr0086271,FBtr0086270,FBtr0086272 3 3 3 101 2R 16148164 16148183 GTTTGCCAAGAAACTGAAGC 58 16148245 16148325 GCTTCGTTGGATAACATTGTG 58 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0301208,FBtr0086281,FBtr0301207 3 3 5 88 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211910 16212015 GTTGTTTAGGGAGCTAGCCA 59 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 2 2 4 154 2R 16361412 16361433 GGTAAATGTTATGATGGACGAC 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 3 3 5 80 2R 16483311 16485065 AGGACTCAGTATAAAGCCACTG 59 16485963 16485985 CTCTATATCCGCCGATATTTGGA 59 NA Drosophila melanogaster 61 CG15649 FBgn0034563 FBtr0071555,FBtr0300563 1 2 2 91 2R 16861135 16861426 TCTTTATGGCCGCTTTACC 57 16861062 16861080 TGTCTCCGTAATCAGTCGA 57 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071653 1 1 2 92 2R 17410740 17442345 TATGAAAGTCTGCATCGGC 58 17442401 17442419 CAGTTCGTGTACCGATCTC 57 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 2 4 4 173 2R 18294822 18294971 ATTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA InUTR Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 2 8 8 102 2R 18612064 18612082 AAGGGACAGAACATTCCCA 58 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 3 2 2 81 2R 18798376 18798394 TCGATCGACCTGTACTGGA 59 18798438 18798513 TGATAAGACTGGGCTGTGAC 59 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302765,FBtr0302769,FBtr0302774,FBtr0302767,FBtr0302764,FBtr0302771,FBtr0302768,FBtr0302763 2 8 13 141 2R 18813126 18814633 GGCTTATAATATTGTTCTGCGG 57 18814811 18814831 GTGAATGTTTCTATGCAGGTG 57 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302127,FBtr0072075 2 2 13 84 2R 19563504 19564584 TCACTAAAGAGAATTGTTCGGC 59 19564629 19564647 GGACTGTAGAGTCCCTCAC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433,FBtr0072434 3 2 3 100 2R 20660803 20660824 AGTGAACTGGATACTCTTACCG 59 20660308 20660742 ATCTTGGTCACTTGAGCCT 58 NA Drosophila melanogaster 61 RpL19 FBgn0002607 FBtr0072406,FBtr0072405 2 2 2 148 2R 20856570 20856655 CTAACACAAACTCGCGTCAG 59 20856441 20856459 CTTACGCTTTCCGAATCCG 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 3 7 8 119 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878689 20878708 ATTCATCCTGGACCGATGAG 59 NA Drosophila melanogaster 61 gol FBgn0004919 FBtr0300179,FBtr0300178,FBtr0072459 1 3 3 80 2R 20962967 20962985 CGACTGCTGTGCTATATGC 58 20962847 20962923 TTATGGAACTCGTGCTTGC 58 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 3 4 4 126 3L 177071 177155 CCTCACTGAGACCATCGAG 59 176963 176981 GTAAAGCTCGTTGTGCCAC 59 NA Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 1 2 2 80 3L 371212 371455 CACCCACATATTACAGTCGC 58 371151 371171 ACCGTCTCGGAAATATACAGG 59 NA Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 2 3 3 114 3L 679819 679906 AGAATTTAGCGACCTGGCA 59 679723 679744 CGTTTCAACCATTTAGCTACCA 59 NA InUTR Drosophila melanogaster 61 CG13887 FBgn0035165 FBtr0072583,FBtr0072584 2 2 2 160 3L 838473 838492 TAAACTTGATCTGCACCCAG 57 838614 839258 CTTGTTGAGCTCGATGAGAG 58 NA Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 2 6 6 80 3L 998874 998893 CGAATACATAGTCAGTGCCC 58 998721 998833 AAGTTACTCAGATCCAGACGA 58 NA Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 3 2 2 143 3L 1307713 1307732 TAGAGATCCCTTTGCAGGAC 58 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 2 4 4 111 3L 1551789 1551871 CTATGTGGACGAGATCGTCC 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 n-syb FBgn0013342 FBtr0072815,FBtr0300894,FBtr0072819,FBtr0302310,FBtr0300893 3 5 5 100 3L 1635218 1635236 TGATGATCATCATGGGCGT 59 1632405 1632423 GGGATACTGGTACTGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 metl FBgn0035247 FBtr0072813,FBtr0072814 3 2 2 95 3L 1639044 1639062 CGTCTTCAAGCACAATGCT 59 1638780 1638801 ATCTTTGAGGTCGAATTCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 sls FBgn0086906 FBtr0072849 2 1 2 80 3L 2046155 2046290 TATTTGAACGTCCTGGACC 57 2046093 2046111 CGTCAGGAGTATGAATCGG 57 NA Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 2 2 2 188 3L 2370045 2370123 CAATTGCTGCTCTTACAAATCG 59 2369878 2369897 ATTCTCCACGCCTTCTTCTC 59 NA Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 1 2 2 80 3L 2389944 2389965 TGTTCAGAGGAATGGATTACCA 59 2389825 2389905 TGGCTTGATAGTAGGTCTGTC 59 NA Nonspecific Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 1 2 2 84 3L 2659738 2659816 CTTAACCATAGGTTATGGGCT 57 2659862 2659880 CATGGACTCAGTTACGGAG 57 NA Drosophila melanogaster 61 CG33234 FBgn0053234 FBtr0113456,FBtr0290142 2 2 2 106 3L 2661989 2662007 TGATTACGTCAACCGTTGC 58 2662077 2662162 CGCAGCAATAAAGAAGCCA 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0301580,FBtr0072975 1 2 4 84 3L 2941549 2941572 GTCTCCTTCCATCATATCAATCTG 59 2941615 2942574 TTTGCTTTCCTGTGTCGAC 58 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776 2 2 4 167 3L 2941469 2941490 TTTATAAGAATCAGATGCGCCG 59 2941618 2947888 AGAGATTGTGGCCTGTGTC 59 NA Drosophila melanogaster 61 CG1271 FBgn0035392 FBtr0072988,FBtr0072987 3 2 4 115 3L 3052756 3052775 ACTCACCCGCTTTCATACTC 59 3052853 3052948 GTTCAGTAGCTCCACAGCA 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0072995,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072996 1 6 15 80 3L 3083800 3085212 CACTTATATGGTCACGCCG 58 3085253 3085274 TGATATGGTGCATAGAAGTTGG 58 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 3 3 3 83 3L 3119726 3119808 TTAAGAGATGGCGTCCGTG 59 3119661 3119679 GAACTTCTGGCACATCTGC 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 1 5 5 80 3L 3310691 3310776 ATTCCTGTCTGTGAAGATGTC 57 3310818 3310836 AAAGCACCCAAGACTTCTG 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0290290 3 1 2 81 3L 3613870 3614079 GATGAGCTTAAAGATATCTCGCG 59 3614115 3614138 CATTAAATGTACCTATTCCCGAGC 59 NA Drosophila melanogaster 61 CG14989 FBgn0035495 FBtr0073207 2 1 1 125 3L 4089150 4089168 CTTGAAGACGTCCAAACCA 58 4090081 4090099 CTCCGGTCTCAGGATTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 1 3 3 89 3L 4224985 4225005 GGATATGGGCAACTACAAGTG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 1 4 6 238 3L 4418265 4418283 AGGCGATGTAATTGAGGTC 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 1 2 2 188 3L 5357299 5358050 CGCCTAGAACACCATTCGA 59 5357061 5357082 TTATATTGTACTCGCGACTCCA 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 1 10 10 113 3L 5543936 5543954 TACTGGCGTTTCTTGTGTC 58 5538159 5538177 ACTTAGCAGAGTAGACGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0077137,FBtr0273233,FBtr0273232,FBtr0077138 1 4 10 82 3L 5538086 5538106 GAACCGTCAGTACTATTCGTC 58 5534359 5534446 CGTTAATACCGTTATAGCGTCC 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112711 2 1 8 97 3L 5735136 5735220 GAGACCCTCCTATGCTCAG 58 5735281 5735299 CGTGACAGTCTACACAACC 58 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091475 3 2 4 188 3L 5920166 5921341 GGTCACCTTTGTCGATTCC 58 5921731 5921814 GTGGTTTGGATCTTGTACGTC 59 NA Drosophila melanogaster 61 l(3)mbn FBgn0002440 FBtr0100355,FBtr0077062 2 2 2 87 3L 6117828 6117914 TGTACCCTCAAATGGTGGA 58 6117759 6117777 TCCTGCACCGATAATACCT 57 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076951 1 1 3 110 3L 6740078 6740209 CGATGAAGATTTCTCCCGTG 58 6739987 6740005 AATCTGTAGGGCACCAGAC 59 NA Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 2 2 3 97 3L 6741026 6741047 GAACTCCAATGGAAATCTCCAC 59 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 2 2 2 63 3L 6940961 6940979 CAAAGCGCCTGATCTATGG 58 6941006 6941094 CATTTGATGCCAGTTGCAC 58 NA DesignRelaxed Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 3 2 11 162 3L 7042665 7043671 GAATACGAAACGCTACGCG 59 7044342 7044361 TGGTGTCCAGATTCTGTACC 59 NA Drosophila melanogaster 61 CG8628 FBgn0250836 FBtr0301218,FBtr0076914 2 2 2 95 3L 7124098 7124249 CAACATGGTGTCGTTCGAG 59 7124305 7124326 TTGAAGAGACCGTAGAATTCCA 59 NA InUTR Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 1 3 3 82 3L 8181670 8182394 GACTGGATGGGTTACTCGT 58 8182440 8182458 CTAAACACGTCGGTCACCT 59 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076596,FBtr0076593,FBtr0076594,FBtr0076595 3 4 4 121 3L 8727433 8727451 CTACCAGAAGGTCCAGGTG 59 8727221 8727350 TGGACAAGTTCTTGACTTCGA 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 2 5 7 92 3L 8902028 8902101 CATCTGGAGTGGTTAGTTTGC 59 8901956 8901974 TGGACTCGCTGCTAAATCC 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273290,FBtr0273286 1 5 7 88 3L 8902026 8902097 TGGAGTGGTTAGTTTGCCA 59 8901956 8901974 TGGACTCGCTGCTAAATCC 59 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527,FBtr0076525 2 4 5 97 3L 9067915 9068167 ATCCTGCTAGTGGATCGAC 58 9068228 9068246 TTCCCTGTTGCTGATAAGC 57 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462 2 1 5 80 3L 9100803 9101069 TGTATATCCGCCAGTTACTGAC 59 9100744 9100763 AATGGCTGATATTGCATGGC 59 NA InUTR Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 2 2 2 60 3L 9366370 9366389 GAAATCGAGTCTTGGAAGCA 58 9366411 9366498 ATCACCACATTGCTGTATCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 2 3 3 98 3L 9503745 9504167 GTCTGTTCCAGGGTAATGC 58 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 CG42673 FBgn0261555 FBtr0302710,FBtr0302709,FBtr0302711 3 3 3 109 3L 9581444 9581463 TATATCCTCATCGGAGCTGC 59 9581535 9584349 CCAAGTGCTCTTTCTTGGG 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 1 7 8 94 3L 9817656 9817676 GACGATCAAATAACGAAGCCC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076363,FBtr0076365,FBtr0076364 1 3 4 171 3L 9856709 9856887 CTCCGGTTTCGTTCTACAG 58 9856556 9856574 GATCTCATAGACGGCTCGT 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 1 4 4 98 3L 9893399 9893533 CTCTCAAGCTCAAGTTGGA 57 9893595 9893613 GGTACACCTTCATGGTGTC 57 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0076344 2 1 4 115 3L 9894013 9894031 AAACACGACAATGCTGTCG 59 9894110 9895260 TCTCCATCGCTCTTAAGCG 59 NA Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076263 3 2 3 118 3L 10681694 10681793 AGAGCTTTGGGACAAGGAC 59 10681874 10682038 TTATTGTTGAAGGCTGCCAC 59 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 1 4 5 125 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109442 11109460 GGAGTCTGGAACAGATCCT 58 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0076189 3 1 3 82 3L 11176788 11176807 CCACCTGCATTTATATGGCG 59 11175735 11176743 CTCCTGATGCTTGACAACC 58 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 2 4 4 80 3L 11520327 11520346 TGATCTCAAAGCCCTAGTGG 59 11518761 11520285 TCAAATAGAGCGAGGGTGTG 59 NA Drosophila melanogaster 61 app FBgn0260941 FBtr0301056,FBtr0301055,FBtr0301054,FBtr0301057 1 4 6 118 3L 12205860 12206203 TCTACGACGAGTCCAATCC 58 12205760 12205778 GACAAGATCGTAACTGGGC 58 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075793 2 1 4 82 3L 13903682 13907076 TATACCTACACGAAGCCCA 57 13903618 13903637 ACTTTCTTCAGGTAAACGGT 57 NA Drosophila melanogaster 61 btl FBgn0005592 FBtr0075778,FBtr0100676 2 2 2 113 3L 14075281 14075384 CAAGACGGTGCATTCATCG 59 14075457 14075479 AGTACTCCGTATCTTGGATATCC 58 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239 1 2 3 94 3L 14619987 14620132 ATCGATAGAAATCTCACGCGT 59 14620188 14620206 ATATCACCGTGTAGGTGGC 59 NA Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075650 3 1 2 216 3L 15134440 15134458 AGCAACAGATTAGTGTGCA 57 15132429 15132447 CTGTACTCCACTGGAGAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 3 2 4 95 3L 15301925 15304066 GATGATTGTGGGACTTTCCA 57 15304123 15304142 TATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075554 2 3 4 80 3L 15504255 15505275 GAGCTCAAGGATCTGAGCA 59 15505317 15505337 TTTGGTGACATTCACATCGTG 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075599 3 1 3 97 3L 15516677 15516695 TATAGAAGCCGATACGCCC 58 15515667 15516618 TGGCGTTAAATGGTCTATCTG 58 NA Drosophila melanogaster 61 AGO2 FBgn0087035 FBtr0075560,FBtr0075559 1 2 2 81 3L 15551210 15551361 AAGTGACTGTGACAGATCGT 59 15551405 15551423 AGGTCAATGGTCGAGTCAC 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 1 3 4 83 3L 15815227 15815245 ACTGTATCCTCGAAGCGTC 59 15815103 15815182 GCTGACAATCTTCTCATTGCT 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112852 2 1 7 150 3L 16058393 16058412 CATTCAACAACACCCACTCG 59 16058520 16059131 GTCGGTTTCCTGTAATACATTGAG 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0114589 2 1 6 187 3L 16107927 16108770 CCAAGACCATCAATCAGGC 58 16108918 16109140 TAAAGTTATCGATGGACTCTGC 58 NA Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364 1 1 2 112 3L 16583851 16584117 AACCCAGCATCGAGATTCC 59 16583757 16583776 AGTACGGAATCTTGTGCTCC 59 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302787,FBtr0302786,FBtr0302785 1 3 12 161 3L 16895016 16895038 GAGGAAATCGAACTAGAAAGACC 59 16895158 16895237 TTCTTTGTCCAACTGCTCCT 59 NA Drosophila melanogaster 61 CG6664 FBgn0036685 FBtr0100439,FBtr0075294,FBtr0075295,FBtr0075293 1 4 4 80 3L 17008138 17008158 GATACCTTCAAGACCAAGTGC 59 17007996 17008099 TTTGGCTTGAATGATGACTGAG 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 1 2 2 82 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330775 17330856 GAATATTATAGCTGCATCGGTGG 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299646 2 1 7 91 3L 17535059 17536618 GCATATTCAATGAAGACACCGA 59 17536669 17536688 GTTGTCTTCCTCGGAATTGC 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 1 4 4 101 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667496 18667514 ATATGGAGTTCGCCTTCCT 58 NA Drosophila melanogaster 61 Mkp3 FBgn0036844 FBtr0075035 2 1 2 80 3L 19063194 19078436 GTAGTTGCTTTACAAGATGGCT 59 19063135 19063153 GCTGTGCGTCTGATTATCG 59 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075009 3 1 12 127 3L 19296303 19296321 GTGTAAGAAGTGGTGACCC 57 19296123 19296215 GGGAGAATTGAAAGGTAAACAG 57 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 2 5 5 80 3L 19795876 19795894 ATAAGCTCATTTGGACGGG 57 19795938 19796013 AACCAAGAAGAACTGGGTC 57 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078205,FBtr0078203 2 2 5 152 3L 20503868 20505044 ACAAGGCAGCAGTTAATTGC 59 20505157 20505177 TGAGGAGACGGACTTTATTGG 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0078289 3 1 4 147 3L 21028387 21061820 CGATCTCGATGATAACTTTCCC 58 21061926 21061946 ATTCTGCAGGTAAACATAGCC 58 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304 3 1 4 84 3L 21208205 21208688 TCACTGAAAGCCGATTATGTC 58 21208732 21208752 GACTAGCATTAGGTCCTTGAG 57 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 3 3 4 117 3L 21488958 21489529 GAAGTGATTCTGTGCAGCAC 59 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078460,FBtr0078461 3 2 2 175 3L 21687560 21687578 TATTATCCTCCCGCACCAC 59 21686809 21687421 CGTATAAACATGCCTGGCG 59 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0078469,FBtr0078468,FBtr0078470 2 3 5 132 3L 21914315 21914334 ATGATCCGGATCTCCAACTG 59 21914425 21918299 CAGCAGTCTCCATTGATATTCTC 59 NA Drosophila melanogaster 61 CG33769 FBgn0053769 FBtr0091770 1 1 1 71 3L 22641076 22641095 CTGTTGTCATAAAGCAGAGC 57 22641180 22641200 AAGTCGATCTGTTGTATGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078532 1 1 5 137 3L 22768458 22770215 TCATTGAGGAACAGACGGG 59 22770316 22770334 TGGCCTCTGTCCATTTGAG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 3 2 2 82 3R 24486 24563 ATATGCTGTCGAGCTATTGGA 59 24607 24625 CAATTACTGGCGCCAAGTG 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 3 6 21 175 3R 110124 120864 TAAAGGAGGTGATGGAGGC 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 1 2 2 88 3R 225227 225245 AACTTCCTGTGGGTTCCAC 59 225097 225176 ATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112568 1 1 2 87 3R 340834 348720 CTATATTGGCGCTGCACAC 59 340765 340783 TAGATAGGTTCGACCGGGA 59 NA Drosophila melanogaster 61 CG31526 FBgn0051526 FBtr0078929,FBtr0111213 3 2 2 152 3R 359083 359101 AGAATGAGGCGTTCCTAGC 59 359277 359296 AAAGGCTAAGGGAAGATGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 2 2 2 96 3R 1081338 1081419 ACGGATATTCCAGGAGAAGC 59 1081261 1081279 TTTGATCGTCTGCTAGGGC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0100199,FBtr0078811,FBtr0110933,FBtr0078810 3 4 19 134 3R 1129895 1138720 TCAAGAACAGGTCACGTAGG 59 1125243 1125261 AGTCCAAGTCGAATGGAGC 59 NA Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 1 2 2 114 3R 1185261 1185709 GGTGATATTCGCAATTTGCCT 59 1185167 1185185 TAATCGGCTGACAAGACCC 59 NA Drosophila melanogaster 61 Rga FBgn0017550 FBtr0078742 3 1 2 171 3R 1434732 1435380 AACCCTATGTTGGCATGGT 59 1434579 1434597 AAGTGGTTCTCTGTGGACG 59 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 1 2 2 80 3R 1487731 1488795 GGGAATAAGTTTCAGTCCCA 57 1488838 1488856 CGCATGAAGTCCCATATCC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 2 2 12 81 3R 1586683 1587381 ACAAATTCGGACATAACTGGC 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 1 2 2 121 3R 1605224 1605528 CACATATCAAATTAGCCTGCTG 57 1605610 1605628 AGATATCCAGGTGGTCCAG 57 NA Drosophila melanogaster 61 CG1213 FBgn0037387 FBtr0078643,FBtr0078642 1 2 2 134 3R 1671137 1671227 CATTGTGGGTGGCATTCTG 59 1671325 1671343 AAGAAGTACGGACTCTCGG 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 1 8 9 152 3R 1829622 1829747 GGAGGAGAAATTGAAGACCCT 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 2 2 2 89 3R 2199081 2199099 AACGTCTGAGCGAATCCTC 59 2198945 2199031 AAGGAGTTCTTGGTCAAATTCC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 1 5 5 84 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216739 2216757 TTCGTGTAGTTGTCCAGCT 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0081671 1 1 2 60 3R 2569747 2569768 TTGTGGACAATTACTCAGTCAG 58 2569641 2569659 TCTACGTTTAACTCGACGC 57 NA DesignNoJunction Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081667,FBtr0081668,FBtr0081665 3 4 5 84 3R 2582675 2583205 CGACGCTACAGATCTTGGA 59 2582609 2582628 CTTATTCCGGTGCTCATGTC 58 NA Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 3 1 1 125 3R 2886665 2886685 GGTCCTACCATCTAAATGCAC 58 2886824 2886845 TCTTGATCACATGAATCACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 1 8 9 80 3R 2926906 2926926 TATGAGAAACAGACGACACGA 59 2925232 2926864 CAGATCAAGCGTTCTGCTG 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602 2 1 3 100 3R 3044374 3044394 GCAACAGGACGATAATAAAGC 57 3044052 3044312 TCCCGACATAGAAATCAGC 57 NA Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 3 1 1 60 3R 3597125 3597145 ATCCCAGCTACGATATAAAGC 57 3597026 3597044 TCCAGATACCGCACATAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081748 1 1 2 109 3R 3636418 3636440 GGCAATAATCAGTAGGTAAACCC 59 3636509 3636594 TACTTCAGACGAAGTGCCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081748 2 1 2 151 3R 3636376 3636397 TCTGACCTTGAATAAGTACGTG 58 3636509 3636594 TACTTCAGACGAAGTGCCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 3 3 5 180 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691469 3694094 ACTCATGTAGAGTAGCCGC 59 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300685 3 1 2 103 3R 3745200 3745218 TTGTACTCCGGTCTGAACC 59 3744989 3745135 TCATACAGGGTCTTCAGACTG 59 NA Drosophila melanogaster 61 CG2698 FBgn0037536 FBtr0081784 2 1 2 125 3R 3830476 3830495 ATGTATTGGATCGGTTGGCA 59 3830583 3830991 CTCGTCCGTACTGTTCCTG 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 2 4 4 85 3R 3843986 3844004 AACTGGAGCTACAGGTCAC 59 3842717 3843939 CATCTGAATATGGTTCTGCGG 59 NA Drosophila melanogaster 61 CG18193 FBgn0037579 FBtr0081839 2 1 1 284 3R 4169503 4169521 AAACTGTTTCTCTTTGCGC 57 4169824 4169842 CATACATCGCCACCTATGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 3 2 3 91 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542284 4542630 GATACCTGCTGGACTCTTCC 59 NA InUTR Drosophila melanogaster 61 skap FBgn0037643 FBtr0113206,FBtr0081957 1 2 4 94 3R 4766832 4766853 GAATCTGTATGACCTGTTCGTC 59 4766908 4767144 CATCCAATGCGAAGAAGCC 59 NA Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 1 5 5 226 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847653 4847671 GATGGGATTCTCGTAGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082053,FBtr0082051 3 2 4 100 3R 5195421 5198485 AACAGCAGATATCGCTCTCC 59 5195340 5195361 ATCGTTATTCAGCAATCGAACC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 2 3 4 71 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520884 5520902 CGATAGAACTCCGACCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 1 3 3 83 3R 5590341 5590416 AACTGAAGTATCCAACGAAGGA 59 5590460 5590478 ACTACCTCGTTGACATGGG 59 NA Drosophila melanogaster 61 CG8478 FBgn0037746 FBtr0082133,FBtr0301871,FBtr0301870 3 3 3 85 3R 5590340 5590415 TAACTGAAGTATCCAACGAAGG 58 5590461 5590479 CACTACCTCGTTGACATGG 58 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 2 3 5 82 3R 5701879 5701897 CGATGTCGTCAAACACGAC 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 3 2 2 137 3R 6680674 6680692 GATGACCTAAAGGTCCTGC 57 6681052 6681072 TTTCGACATCTCGAAGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808 1 1 2 85 3R 6871199 6871217 ATTGCCATTGAGTCACTCC 57 6871263 6872117 GTTTATATTCGCCATCAACCTC 57 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 3 2 3 101 3R 7202931 7203770 GCTCCTACTTCTTCTACATTGAC 58 7203830 7203849 GAAGTACATCTTGAGCACCG 58 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 1 2 3 100 3R 7202932 7203772 CTCCTACTTCTTCTACATTGACAC 58 7203830 7203849 GAAGTACATCTTGAGCACCG 58 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082396 3 1 3 163 3R 7279532 7283317 TCGATGATGGGCTATAGTCAG 59 7279389 7279407 GGCATGTACGAGTGATGGA 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082456,FBtr0082454,FBtr0082452 2 5 6 62 3R 7418094 7418112 AGATGAACAGTGGCTCGAG 59 7416991 7417009 CTACGACCTTGTAGCCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Lk6 FBgn0017581 FBtr0082534 3 1 2 189 3R 7582209 7589218 CAGAGTCAGTCAGACGGAC 59 7582038 7582058 GAAAGGTTGAGGAATGAAGGG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082490,FBtr0082497,FBtr0082499 1 3 15 188 3R 7815238 7818474 TTCTACGGCGACTTTATGC 58 7815068 7815086 GTGAGATGAGTGGAGTTGC 58 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082500,FBtr0082495,FBtr0082494 2 3 15 193 3R 7815046 7817807 TCAGATAACTCCAGCAGCG 59 7814461 7814480 GATTGCTGGAAGAAGATGGC 59 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 1 2 2 68 3R 8529489 8529507 ATCTTCAATGGGCTGGGAC 59 8529601 8529620 TTTGATGAGTTCCTGCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 3 2 2 69 3R 8529489 8529507 ATCTTCAATGGGCTGGGAC 59 8529601 8529621 ATTTGATGAGTTCCTGCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743 1 1 3 119 3R 9134615 9135199 GCGTACTTTCAGATAATCGCT 58 9135280 9135298 ATCCCAGATTCTGGAGCAC 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 136 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210484 9210502 TTAACTCGATGTGCACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 yrt FBgn0004049 FBtr0114374 2 1 4 177 3R 9257602 9257620 GATCTATTGGCAAGGCGTC 58 9257067 9257400 ATAGTCACCCTGAGCTGAC 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 1 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257205 GGATGGATCTTTGACAATGGAC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 2 3 8 93 3R 9488692 9488711 ATCATCCTCTCGTTATGGCC 59 9488767 9491186 ATCCTTGAGATCCTGCCAG 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 Abi FBgn0020510 FBtr0112896,FBtr0082910 2 2 2 92 3R 9945942 9946016 ATTGAGAAGGTGGTAGCCA 58 9945868 9945886 TTTCTTGAGCACGTACAGC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 3 8 10 97 3R 11004068 11004087 CTCTGGCTACAGATATCTGC 57 11002144 11004009 AGTTAGCTGGAATTGTTCGG 58 NA Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0301845 1 1 2 178 3R 11051629 11051702 CGATAATGCGGAATCCTTCG 59 11051843 11051861 AGTAGTCCTTGCCATCCTG 58 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083054,FBtr0083053,FBtr0301846,FBtr0113237 2 4 4 60 3R 11055624 11055644 GGAACCGGATAAACTCTACAG 58 11055666 11055684 AACTGCCGGATCAATACCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 2 2 2 148 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188899 11188917 GAAGTGAACTGGGTTACGG 58 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 3 4 4 97 3R 11217378 11217396 CATGTTCGACTACGACCCA 59 11217454 11218025 CACCAAATACCTTGATCGTGTC 59 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 2 3 3 90 3R 11928090 11928112 TAGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 2 1 7 167 3R 13834720 13835676 CACTCACTGGACATTTGGG 58 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 3 3 7 83 3R 13995812 13997262 AGCAGTTTGGCTAACAAACTC 59 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 gl FBgn0004618 FBtr0083584,FBtr0083585 3 2 2 94 3R 14197166 14197470 CTGAACACAATTCTGGATTCCC 59 14197093 14197111 GTCTCTGGTTCCACAGGAC 59 NA Drosophila melanogaster 61 CG7720 FBgn0038652 FBtr0301201,FBtr0083678,FBtr0301199,FBtr0301200,FBtr0083679 1 5 5 80 3R 14587368 14587390 GTTTGTATCCAGGGAACTATCTC 58 14586863 14587330 AAAGTTGAGACGTCCATTGTC 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301692 1 1 3 80 3R 15060040 15060058 AAACTTTGGTGACCACCCA 59 15059900 15059996 CATTCTCCAGGGACAAGGG 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110919,FBtr0083765 2 6 8 87 3R 15332382 15332400 ACTGATTGCCGTCTATCCC 59 15332448 15332581 GCTGTTTAGGTTAGCATATCGT 58 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248 3 1 2 89 3R 15686429 15686447 ATGGTGTTCTCCACACTGG 59 15683396 15686382 TATAGGAGGATCATCTGCTATTGTC 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083827 2 1 5 146 3R 15842472 15842565 AAAGGATGGCAATCTCTTGAC 58 15842673 15842691 TAGGGATTCGTTATGCGCA 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0089523,FBtr0301478 2 4 4 80 3R 16883425 16883517 CAACAAAGTAGTGCCTTTGTG 58 16883365 16883384 CCGTACTTGTCCAGAAACAG 58 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084076 3 1 22 96 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17180404 17200787 AGACCGTCACATCCTTGAG 59 NA Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 1 2 3 80 3R 17693173 17693191 TCGAAACCATGGAGATGGA 58 17692971 17693129 AGTACCGCTGTATGACCTG 58 NA Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 2 2 2 111 3R 17854854 17854941 GTGATGTCTGGTTCAATGCTC 59 17855014 17855032 TAGATGCCCTGGTTGATGC 59 NA Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515 2 1 2 118 3R 18239892 18239913 CGTTTGACCTGTTTAATTCAGC 58 18239991 18243841 CATCATATTGTCCATGGGCA 58 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252,FBtr0301866,FBtr0084253 1 3 3 63 3R 18288987 18289008 GTAATGAAGTCGTATTTGTCGG 57 18289086 18289106 TCACGATCTTGTCGTTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 3 3 3 118 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380653 TTCTTCATGTACTCGGGTCC 59 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084335 3 1 3 112 3R 18515888 18515965 GAATCTGGAAGATCGTGCC 58 18515794 18515818 CACCTATGGAATTATCGAGTAACTC 59 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084334 3 1 3 89 3R 18515858 18515877 AACTTAAGCATCACATCGCC 59 18515731 18515810 TGGGCTCTACTATGGAATTATCG 59 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 2 2 3 186 3R 18878910 18879087 CAAAGAAAGCACTGATTCCGA 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 CG6784 FBgn0039074 FBtr0084411,FBtr0084412 2 2 2 128 3R 19198716 19198787 AATGAACCTTTGCACACCA 58 19198879 19198897 TCGATAGCCAGGATCACAG 58 NA InUTR Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 2 2 2 91 3R 19519809 19519827 AAGATGTCGATTCGCTGTC 58 19519575 19519754 CAGACCAATCGACTGTTCC 58 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 3 2 2 80 3R 19723176 19723195 CACAACTACCTGTAGTCCAC 57 19723055 19723136 GATACACATTGTACCATATCGC 57 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0300963,FBtr0113392,FBtr0084498 3 4 5 80 3R 19802106 19802127 AAATCGGATAAATCGGAGAAGG 58 19802162 19802242 GAACACCTTGATCATCTCTATATCC 58 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 2 2 2 88 3R 19821616 19821635 CTATTTAAGTCGCGTCTGCC 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 5 6 81 3R 20045367 20045387 TGAACATCTACAACGAACCGA 59 20025658 20045326 GGTGGATTCACGGTAAATGAC 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0084631,FBtr0084630 1 2 4 163 3R 20173306 20173393 CAATCAAGCTCTCAAACGC 57 20173161 20173180 CATAAGAGGACTGCGAAGAC 58 NA Drosophila melanogaster 61 nAcRalpha-96Ab FBgn0000039 FBtr0084640,FBtr0084639 3 2 2 86 3R 20313318 20314186 GTGATCAGATCGATTTGAAGC 57 20314234 20314252 GATAGTACTCACGCAGGTC 57 NA Drosophila melanogaster 61 mld FBgn0083077 FBtr0111012 3 1 2 107 3R 20417049 20417067 GTCGTAGCAGCGATAATGC 59 20417136 20441785 CGTCGCGATTTATATTGAGCA 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581 1 2 18 126 3R 20521078 20521096 CAAAGCGTGTCATGAGGAC 59 20525143 20527823 AGGATGGTGTTCATTTGCAC 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100632,FBtr0100636,FBtr0100637 2 3 18 81 3R 20521109 20521127 ACGCTGATCAAGAAATGCA 58 20521842 20528854 CATTGCGATTGAGTACTAAGTC 57 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100623,FBtr0100638,FBtr0301581,FBtr0100637 1 4 18 95 3R 20508111 20512918 AAAGGGCGAAGACATATTGTG 59 20512975 20512993 GACATCCTCCCGATCTTCG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0301582,FBtr0301581,FBtr0100634 2 3 18 151 3R 20528894 20528912 TGCACCACATGAACAACAC 59 20529027 20529628 ATCATTCTCTGGTGGCCTG 59 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 1 2 2 80 3R 21160213 21160236 GATATGTCACCAATCTGTATCGTC 59 21160101 21160178 AGTCTTCTTCATAATCCTCTCCG 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 1 5 5 102 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507759 21507836 AGATGGCGTAATGGTCACC 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 1 2 7 152 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573921 21573939 ATTCATCCGGTGAACAGGT 59 NA Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0084909,FBtr0084910,FBtr0084911 3 3 5 91 3R 21711543 21711628 AGGAACCAACGGATAAATTCG 58 21711678 21711699 GAAGAACATGATGAGCAGTGAG 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290138 2 1 5 82 3R 21744951 21745030 GTTCTCAAAGCGATTATTTGGC 59 21745072 21745091 TGAATACCAATTCCGGACAC 58 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290137 3 1 5 80 3R 21740877 21741087 ATCACCTACAATCAAGTGACTG 58 21741128 21741146 ACACGTGTAGAAAGTGCAG 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 1 4 5 130 3R 21870341 21871201 TCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 Lerp FBgn0051072 FBtr0085097,FBtr0300939,FBtr0085099 1 3 3 80 3R 22674496 22674580 AGATTGAGATTGACTACAACGC 58 22674437 22674455 GCGAATAGTCCGTCATTGC 59 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 3 4 9 162 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699586 22699604 TCTAGCGGCGATATTTGCT 59 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 2 2 3 187 3R 22886861 22887129 ACAATCCAACAAGGAGTGC 58 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137,FBtr0085138 2 2 12 80 3R 22892381 22892399 GTATCTTTGCAGAGGACGG 58 22892192 22892339 GAAGACAAAGGTATCCGATGG 58 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 2 2 2 83 3R 22938385 22938404 AAATAGTGATGCGGTCACCA 59 22938590 22938608 TCCTTGGACTGCTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 2 3 3 80 3R 22981220 22981298 AACCCAGTGTGCTTATTGG 58 22981342 22981360 CATTGTTATCCGCCATGGT 58 NA Drosophila melanogaster 61 CG31064 FBgn0051064 FBtr0085126,FBtr0085124 2 2 3 85 3R 23058250 23058268 ACACGATAGTCTCACTGCG 59 23057910 23058202 ATCTTCACATTCCTGCAGCT 59 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 2 5 5 124 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102110 23102128 GATTTCTTCAGCACTCCGT 57 NA Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 3 5 5 81 3R 23392371 23392392 CTTGCGATTCATTTACGAAACG 59 23392247 23392331 GAATCCGTTGATGATACTGCC 59 NA Drosophila melanogaster 61 Ppn FBgn0003137 FBtr0301838,FBtr0301837 3 2 4 82 3R 24351017 24351146 CCAAGTTGCTAAGGACATCTG 59 24350955 24350973 GAGTGTCGTAGTACCAGCT 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0301396,FBtr0299746 3 2 13 80 3R 24728519 24745224 CGACTATCTAACAGCAAAGCC 59 24745266 24745284 TGATGGAGAATGTCTCCGG 58 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0085359 2 1 2 116 3R 24867892 24867910 AATGGGCACAAGTTCATGG 58 24868574 24870102 AACTAACGTGCAGACTTGAC 58 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085378 3 1 10 187 3R 24956983 24957856 TTAAGCACTTGCTCAATCCC 58 24958006 24958024 CTCCAGGTCGATCATCTCG 59 NA Drosophila melanogaster 61 SP1029 FBgn0040282 FBtr0085400,FBtr0085398,FBtr0085399 2 3 3 80 3R 25073690 25073708 CTGAACCGACAACTTGAGG 58 25073565 25073647 GGTAACCGAGATCCATTTGG 58 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 3 5 5 83 3R 26289003 26289023 CATCTGCTCTATGACATCTCC 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 8 13 153 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419563 26420549 GTAGAGTTTCTGGTCGGTG 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 2 4 13 197 3R 26421341 26426933 CAGCGGAACAAATTAGGCA 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 1 3 3 80 3R 27027474 27027493 GACACTGGCTTGGATTACTC 58 27027533 27027614 GGGATGGATGTTAAAGTCTTCG 59 NA Drosophila melanogaster 61 Med FBgn0011655 FBtr0085816 1 1 2 145 3R 27438274 27438292 GAAGGACGAATACTCAGCG 58 27438400 27438990 GAGGCACAGCATATTCAGAG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 3 3 22 144 3R 27757911 27757929 TGTATCTGTGCCGACACAG 59 27707585 27757803 GCTTCCGCGATTATTGGTC 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG2177 FBgn0039902 FBtr0114519,FBtr0089132,FBtr0089133 1 3 3 89 4 334038 334056 GCGGAAGAGTAATGTTGGA 57 333909 333985 AATGCAACTCCATCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 1 6 7 81 4 470584 470875 AATGGAACGCGGTTAACTC 58 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 2 3 6 91 4 636725 636744 CATGAGATCGAAGCATCAGG 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 1 4 5 107 4 1036233 1037010 TAGATTTAGAGTGGAGAACAGGC 59 1036148 1036166 AGTGCTGCAAAGTGTTGAG 59 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 1 5 5 80 4 1230675 1230693 CAAGTAGCTCAAGTGGCTG 58 1230561 1230633 TCCTATTCTGCCCTGTAACTG 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 1 2 8 80 X 167264 167284 ATGGAGCTTTCAAATCCTCCT 59 165635 167222 TTGCGTGGTGTAATTGCTG 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0070086,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0070085,FBtr0290017 3 8 8 87 X 396179 396197 TAGCAAACCGTTTGTGCTC 59 396248 396332 CTCATTGTGAGCCAAGGAG 58 NA Drosophila melanogaster 61 CG3056 FBgn0024987 FBtr0070215,FBtr0070214 2 2 2 84 X 1265800 1265960 ACTTCAAGACCGGATATAGCT 58 1266006 1266024 TTTAGCTTCTGGATGGCGT 59 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070345,FBtr0070343 1 2 3 92 X 1924301 1924324 TCCTCTGGAGAATCTTAATACTGC 59 1923944 1924254 GGAGTGTTGATCAAATCATCTGG 59 NA Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327 3 1 2 87 X 1947330 1947863 GTATCCAAGAATTTACCAGCGAC 59 1947908 1947928 CCAGGTGGGTATCATTATGGA 59 NA Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 2 2 2 80 X 1985913 1986003 TCCTGATCAAGATTCTCAAGG 57 1986045 1986063 GCACCTTCAGGATGTAGTC 57 NA Drosophila melanogaster 61 CG3835 FBgn0023507 FBtr0070383,FBtr0070382,FBtr0070381 1 3 3 103 X 2038240 2038324 TTCAAGTTCCTGAACTCCC 57 2038389 2038409 ATGAACTGGTTGATCTTCTCC 57 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 2 3 3 80 X 2243027 2243045 TAAGCTCTTGTCCCTCGTC 58 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091965,FBtr0070451 3 3 8 80 X 2385226 2385245 GGAGATACGTTCAAATCGCA 58 2384863 2385184 CCAACGTCGTTATCTAGTCC 57 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 1 3 3 81 X 3360654 3365918 CCCAATGTCAAGAACTATATGGAG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 1 1 1 69 X 3982331 3982351 CTTAAGTCAGACATCAATGCC 57 3983863 3983881 CACTCAATGGAGAAGCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 cib FBgn0026084 FBtr0070641,FBtr0070639 1 2 3 97 X 4004036 4004195 TAAGGAAGCCATCGAGCAG 59 4004256 4004274 TCTCATTGGTCTCGGTGTG 59 NA Nonspecific Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 3 3 5 84 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248581 4251088 ACTCAATCGCATCCAATGC 59 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 3 5 5 141 X 4962824 4962938 GAGCCAAGATGTACGTGTG 58 4963041 4963061 GAGTTGGTGAACTTAAAGTGC 57 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0301323 2 1 6 114 X 6470497 6470518 GCTAAGGACACATTGTACTGAC 59 6470593 6470831 GGTCTTCACCAAGAGTTGC 58 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 3 7 21 82 X 6982619 6982638 TTTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 2 2 3 102 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7565000 7565018 TTCGCTGAGGATATGTGCA 59 NA Drosophila melanogaster 61 His3.3B FBgn0004828 FBtr0071345,FBtr0071347,FBtr0071346 1 3 3 105 X 9048443 9048461 TTTCAAGACCGATCTGCGT 59 9048217 9048235 GATAGCGCACAAGTTGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112753 2 1 3 83 X 9227647 9230969 CTTTACAGTAAGCTATCGCCC 58 9227584 9227602 TTCACAGTCCTGACTCTGG 58 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 1 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 1 3 4 88 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674563 TCAAATAGGCAGGAACCAC 57 NA Drosophila melanogaster 61 alpha-Man-I FBgn0259170 FBtr0300516,FBtr0300513,FBtr0300514,FBtr0299632,FBtr0300511,FBtr0300515 1 6 8 122 X 10173211 10217606 TCAAAGAGATGATGGAACATGC 59 10173110 10173129 CACCCAGATCGTATGATCCA 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 3 2 3 99 X 10639927 10639945 GACAAAGAGTACCACCGGA 59 10640006 10640118 GAGAAAGTCGTTGTAGGTGAG 58 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 3 4 4 118 X 10676327 10676424 AAGTACAAGCAGGTCTTCC 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 1 8 10 95 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 3 2 2 81 X 10780079 10780097 TTACCATATTGAGCACGGC 58 10776554 10780036 CAGCAGATATTCGTTGATTGC 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073489 3 1 15 87 X 11293775 11293793 CCAATGGAGTTGTGAGCAG 58 11293844 11294833 CAAAGCATAAAGGGTTGCG 58 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073517,FBtr0073519 1 3 3 80 X 11498697 11498778 TACATTTCCAGGACGATCCC 59 11498821 11498839 TGTAGATGAACAGGGTGGC 59 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619 1 3 5 196 X 11607716 11607800 AGGAGACTAAACACCAGCC 59 11607538 11607556 CTCGAACTGTTTGGTGCTC 59 NA InUTR Drosophila melanogaster 61 CG1847 FBgn0030345 FBtr0073567 2 1 2 81 X 11763306 11763324 GAAGCCCATACGAAAGGAG 58 11763369 11763529 AAAGTGGAACTTCACCCTG 57 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 1 6 7 80 X 12168210 12168229 GATTCCCGTTGCGTAATTCC 59 12168266 12170561 GTTTATCTATGTGAAACCTGGATGG 60 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 1 5 7 80 X 12090585 12090604 ACAAGCTGAAGTACGAGGAG 59 12090642 12091227 GAATATAATCCTTCTGCAGCTGAC 59 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 1 2 3 80 X 12331013 12344328 ATGCGAAGAATGTGACGTG 58 12344370 12344390 ATGAGTTTCTGATTGACACCG 58 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 2 4 4 81 X 12550120 12550139 GAACTATTGTCGTAGCCTGC 58 12550183 12550382 CGTTCTGAACAGTATGCGG 59 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0112849 3 1 4 81 X 13094934 13095648 CACAAACCAGGATGCATGAG 59 13094872 13094890 CGACTCCGCCAATATTTCC 58 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 2 2 3 80 X 13170573 13176210 TACCAATACACGATCTGCCA 58 13170512 13170530 AGTCCAATGTCAGAGTGGC 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0073853,FBtr0100561,FBtr0301923,FBtr0100563,FBtr0073852,FBtr0301922 1 7 10 111 X 13489108 13489191 AAATACCCGCCCAAGATCC 59 13488375 13488394 CCTTGGAGATCTCATCCCAG 59 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290303,FBtr0073826,FBtr0290302,FBtr0073825 2 4 4 80 X 13698246 13698330 AATCAGTACCAGGAGGAGC 58 13698371 13698392 GTGCAGAGTTAAAGCTATCGAG 59 NA Drosophila melanogaster 61 l(1)G0007 FBgn0026713 FBtr0073900,FBtr0073901 2 2 2 107 X 14117986 14118070 CCAGAACAATTACAGTTCGACC 59 14118138 14118156 TGTTGCGTCATGATGTCCT 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073951,FBtr0073949 2 2 8 99 X 14818434 14819687 CAAGATCATGAAGTCATCTTCG 57 14820828 14820846 GCTCTTTCCAAGGAATTGC 57 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042 3 1 2 126 X 15381495 15381579 AGAAGGATCGTGAGATAGCC 58 15397616 15397635 ACATTGGGCTCTTCATTCTG 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 1 2 2 83 X 15651251 15651354 TATCTATACGACGTTCGAGCA 58 15651397 15651417 TGAACTTCTTTAGCATGAGGG 58 NA Drosophila melanogaster 61 sun FBgn0014391 FBtr0074177,FBtr0074176 1 2 2 112 X 15743034 15743176 GGAATTACCTACATCCAATACTCC 58 15742945 15742963 GTGAACTTCACATGGCTCG 59 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 2 4 4 85 X 15769163 15769181 GCTAGATTTAGGCGATGGC 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 2 2 12 81 X 15793037 15793055 CCTGGAAAGCATCCTTCCT 59 15793100 15793487 TCTTGTCCTTCCTCATCGC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 2 4 4 84 X 16193686 16193704 GCAGTGGCTTGATCTTGTG 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988 1 1 4 92 X 16190816 16191704 TTATGGTGCCGATTCACAC 58 16191758 16191778 CCATTTGTGACTTTGGATACG 57 NA Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 3 6 6 102 X 16231190 16231208 AATGCAGAACTATGTGCCG 58 16231274 16231423 GAACGCAGACAATGAACGT 59 NA Drosophila melanogaster 61 nonA FBgn0004227 FBtr0074232,FBtr0100586,FBtr0074233 1 3 3 82 X 16258620 16258638 GGAGTATGCACGCTATGAG 57 16259258 16259276 ATTTCTTGCGCTCGTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 3 6 9 188 X 16270359 16270691 GAACAGTGGTATCTGAATGGC 59 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074291,FBtr0074290 3 2 2 151 X 16483579 16483671 GAGATAGATCAGGCGCTGG 59 16483446 16483464 TTATTTCGGAATCGCACGC 59 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 2 3 3 98 X 16494338 16494422 AGCAACAACTCCATCATGG 58 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 2 4 4 80 X 16649790 16649879 TGAAAGTCAGCACTGTGGA 59 16649728 16649750 CATTGGTGTTCGAGATAAAGACC 59 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 3 3 5 81 X 16717173 16717194 ATCGTGCTAATCTGCTTTATCG 59 16717235 16717634 TCGATTTAGGCCAGTCACTG 59 NA Drosophila melanogaster 61 CG10597 FBgn0030832 FBtr0074398 1 1 2 97 X 17125090 17125246 CGAAGCAAATTGATGCATCAC 59 17125013 17125036 CTCGATTTCTTACCTTCATTCTGG 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302836 3 1 5 127 X 17629184 17629202 GATGAACACCGATGTGGAG 58 17629293 17630245 TCGACTTGTACTCACTCCT 57 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 3 3 6 163 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286877 18286896 GGTGTAGTCCATATCGAAGC 58 NA Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 2 2 2 80 X 18548883 18548902 AACATCTTCTGGTCGGTCTC 59 18548756 18548842 GTACTCTTCGCGAATGTTCAC 59 NA Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 2 2 2 100 X 18734583 18734674 TCATGAAATCAACCGTGAGGA 59 18734736 18734754 GTAGTAGTTCGCCTCGTCC 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678 1 4 5 96 X 21221797 21221815 AGCTGATGATGCACTGGAG 59 21221875 21222902 ATGCTTGTACTCGCTCCTG 59 NA Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053 2 1 2 60 X 21485683 21485701 ATGAACGAGTACAACGAGC 58 21484969 21485659 GGCTCCATGGATAGGACTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070050 2 1 2 60 X 21491775 21491793 ATGAACGAGTACAACGAGC 58 21491061 21491751 GGCTCCATGGATAGGACTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 1 9 9 86 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497203 21497221 ATGATTCCCAGATGCTGCA 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299525 1 1 5 99 X 21900445 21904038 CAAAGAACCGGCAACAGAG 59 21904101 21904119 AACTGTTGGTGTAAGCAGC 58 NA Drosophila melanogaster 61 tRNA:CR31604 FBgn0051604 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32480 FBgn0052480 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:M3:70Fa FBgn0011927 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-317 FBgn0067687 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG41503 FBgn0085787 FBtr0302230 2 1 1 109 YHet 305922 305940 AACAATCGTGACAACAGGG 58 306013 306502 TCAATTGACTTGACGCCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Pp1-Y2 FBgn0046698 FBtr0113894 2 1 1 114 YHet 280283 280303 CAATCTATCGAGACCATGTGC 59 291294 291312 AGTCGACAAATGTACGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 kl-2 FBgn0001313 FBtr0300022 1 1 1 84 YHet 83040 122073 GGTAATAGAAGATATGCCCATCG 58 122117 122135 AGAACTTGTGAGAAACGCG 58 NA Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 1 1 1 92 XHet 63655 63675 AGAAGCTTAGAGAAGTGGCTG 59 63729 64080 AATCCTTTGATGGTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-1060 FBgn0083013 FBtr0113560 3 1 1 60 X 6637007 6637026 TAAATCAGTGAATGCCAGCC 58 6636966 6636985 ATTCTTCTAGCAGCAATGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073515 1 1 2 60 X 11473497 11473518 TGACCTATTAATAACACCCGCT 59 11473537 11473557 AGCTAGTTGGAGACTGAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299525,FBtr0299522,FBtr0299523,FBtr0299526 3 5 5 80 X 21898313 21898332 ATTTCGGTGCATGTATCCAG 58 21898373 21898508 GAGTGCAATCTTAGCAAACCT 59 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 2 5 5 96 X 21473853 21474022 AATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG1494 FBgn0031169 FBtr0077187 2 1 1 81 X 21160758 21160934 GTTATGCTATACGGTTACATATCGG 59 21160973 21160991 GGCTCGCCATTAAATACGC 59 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 2 4 4 93 X 20989791 20989905 TAATAGAGATGGAGGATCAGAATGG 59 20989956 20989974 GCCTTCTCACAGAATCCCA 59 NA Drosophila melanogaster 61 obst-A FBgn0031097 FBtr0077334 1 1 1 101 X 20112262 20112280 TCTTCGATCCACTCAACCG 59 20112690 20112708 AGTACTTGCTGGACTTCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33496 FBgn0053496 FBtr0089609 1 1 1 100 X 20081446 20081464 GAGTACAAGGAGCTCTCCG 59 20081270 20081382 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 Or19a FBgn0041626 FBtr0070029 3 1 1 80 X 20036018 20036036 TGCCAGATTCCAATGATCC 57 20035903 20035974 CGCTCCCTTAATCATCACC 58 NA Nonspecific Drosophila melanogaster 61 CG12655 FBgn0031080 FBtr0070036 2 1 1 242 X 19853352 19853371 CATTGTTATCGGATTGGCAC 57 19852729 19852747 GTACCGCTCACGTAGTAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32528 FBgn0052528 FBtr0074793 2 1 1 82 X 19641107 19641292 GTCAACCATACACTCGGCT 59 19641335 19641356 AATATGGCCACAATGTTCTTCG 59 NA Drosophila melanogaster 61 CG14225 FBgn0031055 FBtr0074757 2 1 1 189 X 19567493 19568545 AGGTACGGAACCAAAGTGG 59 19567322 19567342 TGTAGCTCTCCAGGTAAATCC 59 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 1 2 2 80 X 19413771 19413792 AGAGAAGTATCTGGATACGGTG 59 19413642 19413731 TACAGATTGGGCATGACCAG 59 NA Drosophila melanogaster 61 CG14199 FBgn0040890 FBtr0300214 1 1 1 125 X 19388861 19388942 CTAAATCATGAGCGCCCTG 58 19388679 19388772 ATGAATCCGGTCTTGTTGC 58 NA InUTR Drosophila melanogaster 61 CG14195 FBgn0030998 FBtr0074692 2 1 1 144 X 19104365 19104881 TTCTTTGCAGGTATCGGCT 59 19104239 19104257 ACACGAACGAGAGGAACAG 59 NA Drosophila melanogaster 61 CG14194 FBgn0030996 FBtr0074671 1 1 1 98 X 19089024 19089102 GCTTTCAGGTGGTCATCTG 58 19089161 19089182 CTATTAGCGCCAGAATAGAGAC 58 NA Drosophila melanogaster 61 CG7332 FBgn0030973 FBtr0074647 3 1 1 96 X 18780690 18780708 AGGAAATGCGTTACTGCAC 58 18780766 18780878 CTGAACAGAACGGTTAAATGC 58 NA Drosophila melanogaster 61 CG42450 FBgn0259927 FBtr0300218 2 1 1 84 X 18715493 18715630 CCATATGCGTTTATGGGATACG 59 18715675 18715693 TAGCAATGTTGAGGGCCTC 59 NA Drosophila melanogaster 61 CG7053 FBgn0030960 FBtr0074635 1 1 1 60 X 18686503 18686521 GTTTGACTACTCCACCTCG 57 18686543 18686563 GATCTTCTTCATGGCGTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Her FBgn0030899 FBtr0074590 1 1 1 85 X 18099004 18099022 TAAGGACCTGCTTCAGGAG 58 18098809 18098827 GAACTGCCAATTCCAGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Dhc16F FBgn0013809 FBtr0074509 2 1 1 80 X 17964639 17964727 CAGTCGAAGATGAGATTCACC 58 17964769 17964787 GCACCGTGTTCAAGTTCTC 59 NA Drosophila melanogaster 61 CG8173 FBgn0030864 FBtr0074475 1 1 1 87 X 17602233 17602329 CTATGTGGGAACTAACCTCTG 57 17602166 17602185 GCCAAAGCTGAATATGTCTG 57 NA Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 3 3 3 80 X 17536259 17536345 TTCGAAGAGGATACCAATACTG 57 17536200 17536218 GAAGAAGTCCTTCAGTGCC 58 NA Drosophila melanogaster 61 CG8289 FBgn0030854 FBtr0074484 3 1 1 149 X 17529490 17529508 CAAGTCCGATCAAGAAGCG 59 17528995 17529378 ATTTAGCTGCAACCTTCTGG 58 NA Drosophila melanogaster 61 CG9634 FBgn0027528 FBtr0074359 2 1 1 80 X 16622035 16622053 ACCACAATTGCTGACAAGG 58 16621913 16621994 GGCGTTAAAGAGATAACTCTCG 59 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 2 3 3 103 X 16532324 16532446 TCTTCTTGAAGAAGACTGGCA 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 Cyp1 FBgn0004432 FBtr0074238 2 1 1 161 X 16214179 16214197 CGAAAGCGTCAAAGATGAG 57 16212565 16212583 TGTACCCGAATCCCTTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 2 4 4 84 X 16193686 16193704 GCAGTGGCTTGATCTTGTG 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 CG8939 FBgn0030720 FBtr0074138 2 1 1 128 X 15893009 15893088 CAGCTGCAGGTACAAATGC 59 15893180 15893198 TGAAAGCGTAGCGATTCCA 59 NA Drosophila melanogaster 61 CG8184 FBgn0030674 FBtr0074082 1 1 1 80 X 15620696 15620775 CAATGCCTTATCAAGGTTCCA 58 15620815 15620835 CTCGCATCATACCAAATGGAG 59 NA Drosophila melanogaster 61 CG15599 FBgn0030667 FBtr0074061 2 1 1 177 X 15581207 15581225 ATCCGAAGCCAATTGACCA 59 15580970 15581066 GGATTCTTCGGCGTATTGC 59 NA Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 1 3 3 151 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377352 15377370 CTCTTTCTCGTTCCTTGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG9203 FBgn0030646 FBtr0074074 2 1 1 82 X 15369306 15369324 CTCTGAACCTGCAGAACCA 59 15369180 15369262 CTGATAGTCCCTGTCATTGCT 59 NA Drosophila melanogaster 61 shtd FBgn0004391 FBtr0074078,FBtr0074077 2 2 2 80 X 15350446 15350465 TGCTGCTATTCTACAATGCC 58 15350326 15350405 TGGTTACGTGATCGTATAGGG 59 NA Drosophila melanogaster 61 CG9123 FBgn0030629 FBtr0074019 1 1 1 154 X 15235377 15235395 GAGAACGCCCATGTTATGC 59 15235182 15235259 AGAATGAAGGTGGGTGGTG 59 NA Drosophila melanogaster 61 CG9106 FBgn0030624 FBtr0074021,FBtr0074022 3 2 2 62 X 15165607 15165625 ACCTGATGGGCATCATCAG 59 15165563 15165584 CACATACCACATGCAGATAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110968 2 1 3 80 X 14966671 14967977 AGATAATGTGCCAGTTCCC 57 14966609 14966629 GAGATCTTATTGGATAGCCGT 57 NA Drosophila melanogaster 61 CG5347 FBgn0030578 FBtr0073936 3 1 1 60 X 14671188 14671206 TTTGTCCATATGGTGGCAG 57 14671229 14671248 TCCATGTGAAGTGGATACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18157 FBgn0030563 FBtr0073919 1 1 1 60 X 14209293 14209314 CATGTTACCGTTGAAGAATCTC 57 14209254 14209273 GGAATCGGAGAACTTGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11585 FBgn0030543 FBtr0114508 1 1 1 80 X 14083595 14083689 TAAAGATGCACTCCTTTGCC 58 14083729 14083750 GCAGATAGGTGTTACTCAATGG 59 NA InUTR Drosophila melanogaster 61 CG11164 FBgn0030507 FBtr0073809 2 1 1 94 X 13562473 13562563 TGCGCAAAGAGCAATATCG 59 13562620 13562639 ATTTAAGGTTCCCTGGGTCG 59 NA Drosophila melanogaster 61 CG12723 FBgn0030459 FBtr0073738 1 1 1 130 X 13085128 13085146 GTACAGCGTCAACTATCCG 58 13084951 13084969 AGGTCTGCACATAAGTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3775 FBgn0030425 FBtr0073690 3 1 1 60 X 12697604 12697624 GAGCGGGTCAATAATGTAGTG 59 12697646 12697664 CCTTGCACTCGAATGTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ATP7 FBgn0030343 FBtr0273257 2 1 1 80 X 11756030 11756120 GAATGCCCACAAGGTAAAGAC 59 11756160 11756180 GTAACCTTACTGGTCATCGGA 59 NA Drosophila melanogaster 61 CG9360 FBgn0030332 FBtr0073613 1 1 1 87 X 11657999 11658017 ATCGAAGTACGCAGTCACC 59 11657848 11657950 ACTGATGCTCGTAATCTTGGT 59 NA Drosophila melanogaster 61 Tango10 FBgn0030330 FBtr0073553,FBtr0073552 2 2 2 80 X 11616427 11616571 GAGGAGCGATTTAAGATCGC 59 11616614 11616632 CGTACGCTCTACAACTGTG 58 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533 2 1 3 80 X 11572379 11572453 GATAAAGATCACGGAAAGAGCC 59 11572320 11572339 AACAGAACCGTCGTAAAGGT 59 NA Drosophila melanogaster 61 CG11699 FBgn0030311 FBtr0073510 2 1 1 112 X 11465131 11465209 GAGCCAAGGATTTCCAGGA 59 11465285 11465303 CATGAGGTCCGTGAGACTC 59 NA Drosophila melanogaster 61 CG1908 FBgn0030274 FBtr0073440 1 1 1 100 X 11046076 11046094 TCTTCATCAGCCTGTCAGC 59 11046158 11046286 TACATCGCTTCGGTTTCCA 59 NA Drosophila melanogaster 61 CG15207 FBgn0030248 FBtr0073384 3 1 1 60 X 10802059 10802079 CTCAAGGCGTAGACAATAAGG 58 10802099 10802119 AATTGAATTGCACTTGGGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15208 FBgn0030247 FBtr0073383 2 1 1 60 X 10794655 10794676 CTGAATGACATAAGTCTCTGCC 59 10794697 10794715 TCATGCTAAGCGAAAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 1 4 4 80 X 10655534 10655624 CCGTATCCCGATGATATTATCTG 58 10655476 10655495 CACCTTGGACATAATGGACC 58 NA Drosophila melanogaster 61 CG15296 FBgn0030215 FBtr0071512 1 1 1 60 X 10460255 10460275 AACATACCCAACTATTCGGAG 57 10460215 10460233 CCAAATCCAGACAGGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Psf3 FBgn0030196 FBtr0071465 3 1 1 95 X 10279045 10279066 TCCGAACTATTACTCCATCGAG 59 10278903 10278989 GAGTCCAGGAATCCCATCC 59 NA Drosophila melanogaster 61 CG9691 FBgn0030160 FBtr0071392,FBtr0071391 3 2 2 80 X 9778566 9778584 GATTGGTCCTGCTTATGGC 58 9778628 9778646 GCTTGAATTCGCTGTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ser7 FBgn0019929 FBtr0071387 2 1 1 196 X 9759423 9759503 ATTTGGCAAAGCTATCATGC 57 9760024 9760044 CCAATGGCGGTATAATATTCG 57 NA Drosophila melanogaster 61 Sp1 FBgn0020378 FBtr0071381,FBtr0273354 3 2 2 80 X 9624697 9647041 CACAAGTTAATCCGGATCATCC 59 9647081 9647100 TGTTGGATAGCTTGTTGCAC 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 3 3 3 80 X 9568949 9570557 GCTACCAGAACAGTCTAAAGGA 59 9568890 9568909 CCTGGATGTCGTTAAAGCAC 59 NA Drosophila melanogaster 61 c12.1 FBgn0040235 FBtr0071324 2 1 1 80 X 9213078 9213096 AAAGGATCTGAGTGCACTG 57 9212953 9213035 CCAGTCTCCCTGTATTTCAG 57 NA Nonspecific Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 2 2 2 114 X 9182502 9182520 AACGATGAGAATTGCTGCG 59 9182598 9187950 TGAAGCTCTTCCCTCTTCC 58 NA Drosophila melanogaster 61 lz FBgn0002576 FBtr0112814,FBtr0071320 1 2 2 113 X 9182502 9182520 AACGATGAGAATTGCTGCG 59 9182597 9187949 GAAGCTCTTCCCTCTTCCG 59 NA Drosophila melanogaster 61 CG32706 FBgn0052706 FBtr0071287 3 1 1 80 X 8981505 8981526 CTGAAGGAAATCATGAACTTGC 58 8981564 8981658 CTTTGTCTTGAAACTTGACAGC 58 NA Nonspecific Drosophila melanogaster 61 CG1785 FBgn0030061 FBtr0071250 3 1 1 155 X 8610275 8610356 ACCTGATACGCATCAAATCG 58 8610474 8610492 TTACGTCTAGGTCTGGCTC 58 NA Drosophila melanogaster 61 oc FBgn0004102 FBtr0300106 2 1 1 82 X 8527989 8534407 GAATCTAGAGTACAGGTGTGGT 59 8527928 8527946 AAGCTATTCGACTGCTGCT 59 NA Drosophila melanogaster 61 CG2278 FBgn0030017 FBtr0071185 2 1 1 80 X 8062922 8063013 GAAATGGTTACTTCGGTTCCA 58 8062862 8062883 GATACGATTTACAGTCACGCTC 59 NA Drosophila melanogaster 61 CG10761 FBgn0030015 FBtr0071187 3 1 1 60 X 8055825 8055848 GAGAACAAGTTATTGAGCATCCTC 59 8055788 8055806 CCAATCCCTTGATGGTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10959 FBgn0030010 FBtr0071157 1 1 1 80 X 8043455 8043473 TCCGCAAGACTATCAACCG 59 8043585 8043603 TTGTAGTCCTTTGGTTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114,FBtr0071112,FBtr0071113 2 3 3 60 X 7983654 7983675 GATCTACCATCCGAACATTGAC 59 7983615 7983636 CTGATTGATAACATCCAGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir7c FBgn0029966 FBtr0071087 1 1 1 91 X 7769709 7769823 AAATGATGGTCGATGGCGA 59 7769877 7769896 GTACGATGTACTGGGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 3 2 3 103 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7565001 7565019 CTTCGCTGAGGATATGTGC 58 NA Drosophila melanogaster 61 CG12689 FBgn0029952 FBtr0071081 1 1 1 60 X 7479826 7479844 TAATGCAGAATGTGGCTCC 57 7479784 7479805 TCAACTATTCGTATCCTTCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 shf FBgn0003390 FBtr0070978 2 1 1 83 X 6666122 6667101 CGAAGGTGGTATTTGCAAGG 59 6666058 6666077 TAGTAACCCTTGGAGCACTG 59 NA Drosophila melanogaster 61 shf FBgn0003390 FBtr0070978 1 1 1 82 X 6666122 6667101 CGAAGGTGGTATTTGCAAGG 59 6666059 6666077 AGTAACCCTTGGAGCACTG 59 NA Drosophila melanogaster 61 CG3726 FBgn0029824 FBtr0070858 1 1 1 103 X 5835213 5835231 GAACTCTGGATCCACCTCG 59 5835298 5835370 GATTGGTTTGGACCAGCTG 59 NA Drosophila melanogaster 61 CG3033 FBgn0029818 FBtr0070830 1 1 1 105 X 5765451 5765469 ATTCTACCAGTTCCCGGAG 58 5765295 5765383 GCCATAAATCACGGAATCGA 58 NA Drosophila melanogaster 61 CG15765 FBgn0029814 FBtr0070817 3 1 1 158 X 5728505 5730083 TAGTGACGGTCGACAACAG 59 5730778 5730797 AGTAACCAGTATCTGCCACC 59 NA Drosophila melanogaster 61 Tre FBgn0003747 FBtr0070802 2 1 1 86 X 5575441 5575527 GTTTCACTGATGGAACACCT 58 5575576 5575594 ATAGGATTCCACGGGATCG 58 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 2 3 3 81 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309886 5309905 AATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 CG32773 FBgn0052773 FBtr0070703 1 1 1 60 X 4282027 4282045 CGAGATGTCTCGATGTCAG 57 4281985 4282003 AGGACATGCAGGAAGAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12693 FBgn0029705 FBtr0070654 1 1 1 109 X 4221737 4221755 AACGATCAAATGTCGGTGG 58 4221583 4221665 CGGTACCTTATCTCCAGGTG 59 NA Drosophila melanogaster 61 CG15571 FBgn0029696 FBtr0070664 3 1 1 60 X 4110989 4111007 ATCCCACTACTATGAGGCG 58 4110947 4110967 TCGTTGCTAAACTTGTAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15375 FBgn0029694 FBtr0070637 2 1 1 98 X 3995735 3995831 CTTCTTCATTTCGTCAAGGTC 57 3995889 3995909 GTTTAGCTCCATGTAGTTCGA 57 NA Drosophila melanogaster 61 CG2947 FBgn0029676 FBtr0070597,FBtr0070598 1 2 2 191 X 3684308 3684326 TTCGTGGAGAAGTTTGGTG 58 3684561 3684796 GATCACACCCTCCATGTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571 3 2 3 81 X 3408480 3409290 TGTGGAAACTTGGTGTCGA 59 3409335 3409353 CTTTAGGCAGAAGTGCCAG 58 NA InUTR Drosophila melanogaster 61 rst FBgn0003285 FBtr0070562 2 1 1 103 X 2849649 2849667 AATGTGACTCGCAAGTTCC 58 2849225 2849583 CTGGGAGCATAGCTTATGTC 58 NA Drosophila melanogaster 61 fs(1)Ya FBgn0000927 FBtr0070485 3 1 1 72 X 2618389 2618409 AATGTCCTAATCATGCGACAG 58 2618500 2618518 ATTTGCCGCAACAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070502 3 1 2 121 X 2590287 2590367 ATATCCTAGACAAGGCGCT 58 2590184 2590202 CTCCAGTTTCACCGATGAC 58 NA Drosophila melanogaster 61 CG12496 FBgn0040385 FBtr0070462 3 1 1 64 X 2304434 2304452 TCCGTTGGATCCCTTTCTG 59 2304388 2304407 GTTTGTTAACTCCTGCACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vml FBgn0085362 FBtr0112535 1 1 1 60 X 2170906 2170926 CCCTCATATTCCTCTTCTGCT 59 2170945 2170966 CTGAATAAGATGACGATGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3078 FBgn0023524 FBtr0070415 2 1 1 155 X 2152484 2152502 CAGTCTGCCGAATCTTCAC 58 2152286 2152366 TTATACGACGATTGCTTGCG 59 NA Drosophila melanogaster 61 Pgd FBgn0004654 FBtr0070384 1 1 1 80 X 2039435 2039528 GAAACATGAGCGGACAAGC 59 2039569 2039590 TCTCGTCCATGTTGAGTATCAG 59 NA InUTR Drosophila melanogaster 61 mip130 FBgn0023509 FBtr0070315 1 1 1 80 X 1802378 1811017 TGTACCCTATGCTTACCGG 58 1811061 1811079 AAGCTCCTGCCTTCTTACC 59 NA InUTR Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 2 2 2 96 X 1347989 1348057 TCTCTATACGATCGTGGGAG 58 1348116 1348134 CTGTCCGTTGGAATCACTG 58 NA Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070209 2 1 3 80 X 1237240 1237333 AAATGCATGACATCATGCG 57 1237375 1237395 TGTAGATGAAGTAGCGATACG 57 NA Drosophila melanogaster 61 CG11403 FBgn0026876 FBtr0070245 2 1 1 96 X 1131807 1131826 GTTTGCTCATAGAGGCAGTG 59 1131672 1131690 CAGGAAGCAAACTACTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CR40574 FBgn0085749 FBtr0114199 3 1 1 273 U 9836254 9836277 GGATATAGGTAGTGTAAGCTAGCT 59 9836509 9836527 TGTCGTAAAGCAGCTAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40766 FBgn0085773 FBtr0114223 3 1 1 148 U 8596276 8596294 GGTTCCACTTTCGTAACCT 57 8596406 8596424 ACTTCCATGGTAGTACGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41590 FBgn0085807 FBtr0114261 1 1 1 60 U 7400299 7400319 CTTTCTCGAATCTATGGGTGG 58 7400341 7400359 CAGACAAATCACTCCACGA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42436 FBgn0259867 FBtr0300164 2 1 1 149 U 8893542 8893561 TAAACAAAGCGCTTGAACTG 57 8893673 8893691 CTTGACTTCGAAATGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42419 FBgn0259850 FBtr0300147 3 1 1 60 U 7175832 7175851 GCAATTAAACAGATTCCGCA 57 7175872 7175892 TGAGGTGTATTAGTAGGTGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42413 FBgn0259844 FBtr0300142 1 1 1 60 U 6604887 6604905 TTCAGGACACGTTCAACCA 59 6604845 6604863 CAGGATCACTTCCAGTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mitf FBgn0067895 FBtr0100347,FBtr0100348 1 2 2 80 4 1224346 1224364 AGCTCGTTACAGTCTACCT 57 1224406 1224999 GAATGATGGTAGCTCAGAGAC 58 NA Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 2 2 2 99 4 1194713 1194793 ACAATACAGACTCGACTGGA 58 1194633 1194651 TTACAACCCTTATGTGGGC 57 NA Drosophila melanogaster 61 Thd1 FBgn0026869 FBtr0089106 3 1 1 83 4 570396 570414 AATGGAATGTCCGAGGAGG 59 570239 570355 TATCCCGACTATAACGATATCAAGG 59 NA Drosophila melanogaster 61 CR33629 FBgn0053629 FBtr0091606 2 1 1 84 3R 5887631 5887649 TGAGTCGGACTTTGCTCTC 59 5887692 5887766 TAGGTTGGACAGAGTATCTTTGAG 59 NA Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 2 2 2 163 3R 12677051 12677070 TTTCCTATCGCCACTCACTG 59 12677196 12681548 ATGGATGTCCTTGGTCCAG 59 NA Drosophila melanogaster 61 mod FBgn0002780 FBtr0085874 2 1 1 82 3R 27879267 27879354 CCTACCAAACGAGTATCTCCA 59 27879398 27879416 TAGTGAAACGCTGCAAAGC 59 NA Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 3 2 2 60 3R 27286573 27286650 AAGCATAGATTTCTGGACGC 58 27286532 27286550 CACGGTTATCGGCAATGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG18672 FBgn0040628 FBtr0085762 1 1 1 82 3R 27086485 27086714 CGGTAAGCATTAGCTTGGAC 59 27086759 27086777 GTAACGACCCTTCAAACGG 58 NA Drosophila melanogaster 61 CG15556 FBgn0039821 FBtr0085737 1 1 1 80 3R 26954881 26954961 CAGGATTGAATGATACCAAGCT 58 26954822 26954843 CCTCAAATTGAGTTTCATTCGC 58 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0273386,FBtr0089389 1 2 4 80 3R 26742431 26749147 GAGAAACTCAGAATTTGGGCC 59 26749187 26749207 ATCCAAACTATTTGCTACGGC 59 NA Drosophila melanogaster 61 CG31013 FBgn0051013 FBtr0085671 2 1 1 81 3R 26470215 26470235 GAATTACTAGGCGCATCATGG 59 26470096 26470176 CCTATGCCGTAATTAATCACCTG 59 NA Drosophila melanogaster 61 CG2218 FBgn0039767 FBtr0085627 1 1 1 215 3R 26252529 26252869 TGGGAGCTAATGATCTTCCC 59 26252333 26252353 CTTGAAGTGCTCCGAATTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15528 FBgn0039742 FBtr0085591 3 1 1 125 3R 25875120 25875223 GTAGCTATTCAGCTGAGTGC 58 25875014 25875032 CAGTTTGTCCATGTAGGCG 58 NA Drosophila melanogaster 61 janB FBgn0001281 FBtr0085598 3 1 1 187 3R 25864033 25864109 ATGTTGACAATCACTTGGCG 59 25863804 25863826 CGCTTGAAGTATATTCCTTGTCC 59 NA Drosophila melanogaster 61 CG15522 FBgn0039723 FBtr0085503 2 1 1 128 3R 25753726 25753744 GTACTCAGCTACGAGACGG 59 25753833 25753913 GAGCAAGTATCCTGTTATCAGC 59 NA Drosophila melanogaster 61 CG7789 FBgn0039698 FBtr0085483 3 1 1 199 3R 25629391 25629473 AGTATACACAGGGACACGT 57 25629636 25629654 GGTTATGATGAACTGGCCG 58 NA Drosophila melanogaster 61 ppk19 FBgn0039679 FBtr0085451 2 1 1 108 3R 25499306 25499324 TCGTTGACTTATAACCGCG 58 25499396 25499463 GAACTCCATCAATGGGAGG 57 NA Drosophila melanogaster 61 CG18110 FBgn0039677 FBtr0085449 1 1 1 80 3R 25496414 25496493 CTGATCGACTTAATGGTTTCCT 58 25496534 25496552 GAGTTCGTTGATGCAACCT 58 NA Drosophila melanogaster 61 CG2006 FBgn0039664 FBtr0085425 1 1 1 60 3R 25316141 25316159 CCTACAATGGGCAGTACGA 59 25316181 25316201 TGGATGAGATCGTACATGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113303,FBtr0113304 1 2 2 81 3R 25002461 25003125 GCGATTGTTTAGCCAAGCT 59 25002398 25002416 CAGGGAGACGTTCATCAGG 59 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516,FBtr0085359 2 2 2 92 3R 24867136 24867328 AGAGTCACTTCGATCGAGC 59 24867384 24867402 TGTTGCTCACATTGGTCAC 58 NA Drosophila melanogaster 61 wdn FBgn0005642 FBtr0085356 3 1 1 90 3R 24635847 24635866 GAAGAAGCACCTAAAGACGC 59 24635716 24635794 GCTTCCCAATTTGAGGCAC 59 NA Drosophila melanogaster 61 CG4849 FBgn0039566 FBtr0085257 3 1 1 90 3R 23790242 23790320 GCATAAACAAGATTGATCGCC 58 23790371 23790390 TTGACTTCCTCCACAATGTG 58 NA Drosophila melanogaster 61 CG33213 FBgn0053213 FBtr0085271 1 1 1 60 3R 23744805 23744823 AGTGAAAGAACTGCATGCC 58 23744763 23744782 GGATTTCTTGGGAGACTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS22 FBgn0039555 FBtr0085247 2 1 1 60 3R 23743794 23743812 GCTGAAGAAGGTGCAACTG 59 23743835 23743854 TTTCTCCCGGTTAACTTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp98AB FBgn0013745 FBtr0089438 1 1 1 85 3R 23520632 23520650 CTGTTCTTAGCCGCATTGG 59 23520698 23520717 GGTGATTCACTTGGACATCC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG14260 FBgn0039504 FBtr0085157 2 1 1 153 3R 23091558 23091576 ACTGCTACATCGACAAGCT 59 23091741 23091759 GAGTTGTCCATGAGCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14258 FBgn0039482 FBtr0085103 1 1 1 80 3R 22919237 22919257 CTATCAATGCCGATCTGAAGG 58 22919299 22919371 GATTTGGATCCCAGCTGGA 59 NA Drosophila melanogaster 61 NepYr FBgn0004842 FBtr0085100 3 1 1 182 3R 22854346 22854364 CATTGACCGCTACATAGCC 58 22855622 22856386 CGGCAAATGTATTTCTCGC 57 NA Drosophila melanogaster 61 CG18472 FBgn0039463 FBtr0085068 3 1 1 95 3R 22773824 22773842 CTGAAACCGGATAGCAAGC 59 22773901 22773979 AGTCCAATCCAGAATGGGC 59 NA Drosophila melanogaster 61 TwdlL FBgn0039437 FBtr0085056 2 1 2 275 3R 22451235 22451317 CCTTCATCGTAATGTGCCT 57 22450978 22450998 CAAGACCGGAATCAATAGAGC 58 NA DesignRelaxed Drosophila melanogaster 61 Hex-t1 FBgn0042711 FBtr0085010 2 1 1 60 3R 22275550 22275569 TAGCTGTTATGTGGAAAGGG 57 22275590 22275610 CTTTCTGTACTCATCACCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 2 5 5 104 3R 21507674 21507692 CATGACCAATCTGTACGGC 58 21507760 21507837 AAGATGGCGTAATGGTCAC 57 NA Drosophila melanogaster 61 Ssadh FBgn0039349 FBtr0100571,FBtr0084891,FBtr0300728,FBtr0100570,FBtr0100569 1 5 5 60 3R 21451884 21452078 CAACCTGCTCAAGAAGTGG 58 21451842 21451860 TATCTCGGCTATCTCCTGC 58 NA DesignRelaxed Drosophila melanogaster 61 tobi FBgn0261575 FBtr0084847 2 1 1 87 3R 21170771 21170851 GCAGTCTATCTATGATGAGTTCCT 59 21170707 21170726 GTAAATGTCTCGCTTGGTGG 59 NA Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 3 2 2 135 3R 21085147 21085227 TCTCACAGACCTACCAATCC 58 21085325 21085343 GCATAGCACACGATGTACC 58 NA Drosophila melanogaster 61 Cad96Ca FBgn0022800 FBtr0084874 3 1 1 82 3R 21024686 21027290 GAACTGGAGGTAATGAAATCTCTG 59 21024627 21024645 AATGTGGGATCCTTGTCCG 59 NA Drosophila melanogaster 61 Smg6 FBgn0039260 FBtr0084796 1 1 1 80 3R 20856974 20856995 CGTGAATGTTTATGTACGTTGG 58 20856861 20856935 TCGATGAAAGAGTGTTCTTCC 58 NA Drosophila melanogaster 61 CG11069 FBgn0039244 FBtr0084712 2 1 1 80 3R 20721488 20721511 GGAGTATCTTAATATCAGTGAGGC 58 20721550 20721623 TCCAGCAATAGCATGACAG 57 NA Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 1 2 2 80 3R 20358455 20358475 GGATTGTGCTGAATTAACGGA 59 20358515 20358591 ATAATGTTAGCATCGGTTGGC 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 1 2 3 91 3R 19977631 19977649 CGGAATGGAGTAATAGCGC 58 19977482 19977579 TGTATTGATTCTCTGTTCCACG 58 NA InUTR Drosophila melanogaster 61 Syx1A FBgn0013343 FBtr0084588 1 1 1 60 3R 19929845 19929864 AGAACATCGAGCAGGAAGAG 59 19929804 19929824 GTCTTCCGAATTCTCAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SMC1 FBgn0040283 FBtr0084541 2 1 1 80 3R 19886595 19886616 TCCTCCAAGAAGTCAATTAGTC 57 19886656 19886741 GATCTTGGGTCCAAATTCGT 58 NA Drosophila melanogaster 61 CG33337 FBgn0053337 FBtr0084485 1 1 1 80 3R 19416875 19416964 CTTCGCAAATGATATGTGCC 58 19416814 19416834 AGCAGGATAGGAGATATGAGG 58 NA Drosophila melanogaster 61 rumi FBgn0086253 FBtr0084320 1 1 1 108 3R 18576190 18576208 TTTGGTAGGAACAGGAGGT 57 18576050 18576121 CTTGAAGCTAAATTCATCCTCG 57 NA Drosophila melanogaster 61 CG17141 FBgn0039020 FBtr0084322 2 1 1 95 3R 18573111 18573131 AATGTAGACTGCATAGTCGAG 57 18572981 18573054 TTTAACACCACTTCCGGTG 58 NA Drosophila melanogaster 61 CG17618 FBgn0040587 FBtr0113328 3 1 1 64 3R 18553152 18553170 TCGCTGCCAGATTATTCAG 57 18553193 18554567 CATCTTTCCTTGTAATAGTCCAGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG7045 FBgn0038978 FBtr0084258 1 1 1 60 3R 18317859 18317877 GAGAAGTTGAAGCAGTGGA 57 18317901 18317919 AAATACATTGCGTGTCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0301866 2 1 3 153 3R 18289703 18289721 GATGTGGTCAAATGGGTGC 59 18289837 18289905 TTGCTGGAACAATAGATGCG 59 NA InUTR Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0113264,FBtr0084184 2 2 2 80 3R 17855917 17855938 CATGTATGTGCTCTATCTGGTG 58 17855792 17855877 AAGCGCATATCAAAGTACGG 58 NA Drosophila melanogaster 61 CG6455 FBgn0019960 FBtr0084189,FBtr0290271 2 2 2 177 3R 17847236 17847317 AGGAGAAGATTGTCGCCTG 59 17847077 17847095 TTCCGCCAGTACTTGTCTG 59 NA Drosophila melanogaster 61 Gr93a FBgn0041229 FBtr0084133 2 1 1 111 3R 17659392 17659410 GTGTGCGGATTATACGGTG 58 17659482 17659564 ACCGAGAAATGTTTCAACACTC 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 1 5 5 82 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396867 16396885 TTGTCTATCTCCCGAGCCT 59 NA Drosophila melanogaster 61 Sirt2 FBgn0038788 FBtr0083882 3 1 1 100 3R 16154683 16154757 GGCATATCTACATCTGCTGG 58 16154820 16154838 AATATGGCCGTAGGATGTG 57 NA Drosophila melanogaster 61 MED25 FBgn0038760 FBtr0083825 1 1 1 60 3R 15836895 15836916 AACAGATGCAACAGGATAACTC 58 15836935 15836955 TGCATATTGAGTTGGAACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4468 FBgn0038749 FBtr0083852 2 1 1 60 3R 15740830 15740849 CAAGGATCTAAATTCCGGCT 57 15740721 15740808 CATCATTTCAAATGCCTCCG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Vha13 FBgn0026753 FBtr0083804 1 1 1 118 3R 15470015 15470036 GCGAGGAATTAGAGAAGTTTGG 59 15469551 15469936 CTTGCCTTGCGTTTACGAG 59 NA InUTR Drosophila melanogaster 61 Ino80 FBgn0086613 FBtr0083771 1 1 1 80 3R 15210672 15210692 GACTGATTTGCAAAGGAACCA 59 15210084 15210633 TTATGACCATGCGTTGTATCTC 58 NA Drosophila melanogaster 61 CG7715 FBgn0038646 FBtr0083685 3 1 1 106 3R 14554049 14554142 CCAGAGATGAAAGTATTCGCA 58 14553963 14553981 CAGCGGATACTGATCTCAC 57 NA InUTR Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 2 2 2 80 3R 14416080 14416100 CCAGAAGTACAGGATCCTTCC 59 14416140 14416253 CAGGAATTCGTCTTCTTCAGC 59 NA Drosophila melanogaster 61 tatl FBgn0260241 FBtr0299939 2 1 1 60 3R 14081522 14081602 AGTGTTTGCCAAAGAAGTACTC 59 14081623 14081641 AGGCCAAGAATAAGCAAGG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG7183 FBgn0038583 FBtr0083610 1 1 1 179 3R 14046065 14046272 GCATAATATTGTGGACAGTCCT 58 14045907 14045928 GGAAAGATTCACACTAATAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7985 FBgn0028499 FBtr0083559 2 1 1 234 3R 14026152 14038138 CGGCTTTAACAATGCACTC 57 14038336 14038354 TGCTCGATAAGCTTCTGGA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083612 3 1 3 282 3R 14025011 14025030 GTCGAATACACGGACAAAGC 59 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7215 FBgn0038571 FBtr0300247,FBtr0100283 3 2 2 63 3R 13992872 13992890 CAATCAAGGTGCTGAAGGG 58 13992768 13992786 TCCAGAATCGTCGATGTCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG14315 FBgn0038568 FBtr0083547 1 1 1 60 3R 13984917 13984938 GGTGTCCAGTGTTATCTATCTG 58 13984958 13984977 ATTCGACAGAAGGACATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18012 FBgn0038552 FBtr0083523 1 1 1 60 3R 13635518 13635595 CCTACGATTTCAAGTGCCTG 59 13635477 13635496 CCAAACACGAAGCCATTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14322 FBgn0038532 FBtr0083476 1 1 1 80 3R 13494651 13494670 AACTCAAACTGGTCGTTTCG 59 13494710 13494791 GAAGATGTGACGATCTTATCGC 59 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0300767,FBtr0083502 3 2 2 60 3R 13436887 13436906 TGGCTACTCAGGCTATAACG 59 13436846 13436864 TCCTGGATAGTAGCCACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eh FBgn0000564 FBtr0083444 3 1 1 85 3R 13272986 13273081 AGAGATTTGACTCCATGGGT 58 13272719 13272737 GTAATCTCCCAGCATGGTC 57 NA Drosophila melanogaster 61 TwdlW FBgn0038487 FBtr0083415 3 1 1 89 3R 12967936 12968027 TATTTGTGACGGTTCTGATGG 58 12967867 12967885 GGATGCGGTAGTTGTAACC 58 NA Drosophila melanogaster 61 CG5255 FBgn0038485 FBtr0083406 3 1 1 90 3R 12964334 12964411 ATATCCAGATGCTCACGCT 58 12964464 12964483 GATATCCTCAGAGCTGTCCG 59 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 3 3 3 109 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901809 12901827 GTAAACCTCTCGCTCCTCC 59 NA Drosophila melanogaster 61 ns1 FBgn0038473 FBtr0083426 1 1 1 100 3R 12897424 12897445 GTTGGAATTCCTAATGTAGGCA 58 12897283 12897364 TGCATTGATTTGGTCACTCC 58 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 3 5 5 81 3R 12755407 12755426 CAATGCGTATGTTTCCAAGC 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 CG42232 FBgn0250754 FBtr0290134 3 1 1 82 3R 12292238 12292258 CAATAGGGAACTTCAGGTGGA 59 12292099 12292197 ATTTGCTATCATCTTCGGAACC 59 NA Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 2 2 2 98 3R 12195609 12195627 CCAATCGGCCAATACTGAG 58 12195389 12195549 ATACGCACGCCTTTATTAGTG 59 NA Drosophila melanogaster 61 tara FBgn0040071 FBtr0083257 3 1 2 298 3R 12052154 12082511 AATCCAATGTGAATTCCGCG 59 12082769 12082790 ATGACCATTGCTAATACTTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Fer2 FBgn0038402 FBtr0301709 2 1 1 80 3R 11975892 11976036 ATCCAGAGTAGCATCAATTCG 58 11975832 11975850 CTTGCTCAGACGTTTCTCG 59 NA Drosophila melanogaster 61 CG5903 FBgn0038400 FBtr0083281 1 1 1 231 3R 11972262 11972280 CAACGATGGGAATCATGGC 59 11971986 11972004 TATCCAGACTGCACCTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 1 3 3 89 3R 11928091 11928112 AGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 CG31292 FBgn0051292 FBtr0083199 3 1 1 80 3R 11732185 11732208 GCTAAAGAGATTTGTGATCGTAGG 59 11732247 11732324 TTGCTGTGGAAGTACTCGT 59 NA Nonspecific Drosophila melanogaster 61 CG42404 FBgn0259823 FBtr0300117 2 1 1 98 3R 11078059 11078138 GCAGCATTGGCTACATAGC 59 11078200 11078218 ACAAGGGATAGTGGGTTGC 59 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 1 3 3 118 3R 10616867 10616885 TACAGTAGTGCCTCGACTG 58 10616967 10619175 GTGGCTTGTATCTTGCCAC 59 NA Drosophila melanogaster 61 CG3259 FBgn0038221 FBtr0082924 1 1 1 157 3R 10128969 10128987 TCCGTCACCAGTTAAGCAG 59 10129108 10129191 ATGGAGGAACCATTTCCGG 59 NA Drosophila melanogaster 61 CG14839 FBgn0038219 FBtr0082920 1 1 1 60 3R 10088810 10088830 GACAAGACGGCACTATTAGAG 58 10088852 10088870 TAAGTTGCCGCATTAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9926 FBgn0038190 FBtr0082877 3 1 1 60 3R 9776311 9776331 ATGTGGAGCTAAATTCACTGG 58 9776271 9776290 TCTGAATCCTTCTCATGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ems FBgn0000576 FBtr0082863 3 1 1 186 3R 9729026 9729334 TTCCCTGGAAGTTTCCTGG 59 9729484 9729502 TCTGGAACCACACCTTCAC 59 NA Drosophila melanogaster 61 Adgf-D FBgn0038172 FBtr0082845 3 1 1 80 3R 9531026 9531044 GATGTGGTTTCTAGGTGCT 57 9530531 9530985 GTTTCATAGGGTAGATCTGTGG 58 NA Drosophila melanogaster 61 CG14367 FBgn0038170 FBtr0082819 2 1 1 82 3R 9519867 9519942 AAAGTCCTTAGTCTTCGATCCC 59 9519979 9520003 GATTCTTGTATTCCTCGTGTATCTG 59 NA Drosophila melanogaster 61 CG17025 FBgn0040554 FBtr0082792 3 1 1 81 3R 9284262 9291444 TCACCAGAAAGCTAAATGACTG 58 9284202 9284221 TACAAGATGTCCTGGTTCCA 58 NA InUTR Drosophila melanogaster 61 CG34309 FBgn0259831 FBtr0112505 3 1 1 124 3R 9198393 9198411 ACCAACAAGTTACGGTGGA 59 9198608 9198626 CAGATGTCCAGGTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8138 FBgn0038122 FBtr0082732 3 1 1 81 3R 9007302 9007320 TTCAAGGGAACCGATCCAG 59 9007361 9007439 AGATAATGGTCGATATCTCCTGC 59 NA Drosophila melanogaster 61 l(3)87Df FBgn0002354 FBtr0082703 1 1 1 80 3R 8856984 8857067 ACCTGCAGGTATCAATGGT 58 8857110 8857129 CTCATAAAGGGCTTGTCGTC 58 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 3 2 3 80 3R 8853861 8853940 ATGACGTCTCTTATGTCATTCG 58 8853802 8853820 TAAGGATGTGTATGCGCGA 59 NA Drosophila melanogaster 61 granny-smith FBgn0040493 FBtr0290274,FBtr0290273,FBtr0082730 2 3 3 80 3R 8785056 8785074 GGATAACTTGCATGCCGTC 59 8784930 8784948 AGGGTGTGAATGTCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0114499 2 2 6 153 3R 8522010 8522183 ATAGTCATGCAGGTCCTGTC 59 8522297 8522317 TGAACAGATTGATCATGGTCG 58 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630 2 1 5 199 3R 8269848 8270528 GGTGTAATCCAGTTGATGCA 58 8270690 8270708 TCACGGTGATGTCCTTGAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5844 FBgn0038049 FBtr0082591 1 1 1 248 3R 8260915 8260992 TTCAACCAGACCTTCAAGC 58 8261204 8261222 GTTTGGCTTATCCTTGGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG4115 FBgn0038017 FBtr0082568 3 1 1 126 3R 8185990 8186070 GGCAAGGGTTACTTCTTCTC 58 8186159 8186177 TCTCCAAACTGGTCTCCAG 58 NA Drosophila melanogaster 61 CG17738 FBgn0038009 FBtr0082565 2 1 1 60 3R 8096914 8096933 CTATGGAGGTTTCGGAAGAC 57 8096954 8096974 TTAACCAAAGAAAGGACCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3809 FBgn0037995 FBtr0082545 1 1 1 60 3R 8024280 8024302 CACTTTATCAGCTGAAGGAAGAG 59 8024428 8024446 GGACCGTTGATGATCACAG 58 NA DesignNoJunction Drosophila melanogaster 61 mthl5 FBgn0037960 FBtr0082515 2 1 1 80 3R 7711182 7711201 AATTCGTCATCGGGATTCCA 59 7711058 7711140 CTAGCTTATCAGAGCTGCCA 59 NA Drosophila melanogaster 61 CG5281 FBgn0037902 FBtr0082391 1 1 1 137 3R 7261665 7261683 AAACTCAGTGAAACTGGCG 58 7261784 7261863 AAAGTTTCAGCATCCTGCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Ugt86De FBgn0040255 FBtr0082376 2 1 1 60 3R 6993443 6993464 TCCAGTTCCGGAATTATTTGAC 58 6993338 6993359 CTTCCGGTTTGTTAGATTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Ugt86Dc FBgn0040257 FBtr0082337 2 1 1 83 3R 6980612 6980923 TGATGGGCGTTTACAAAGC 59 6980967 6980988 AGCCCATTAAACTGATTCTTGG 59 NA Drosophila melanogaster 61 CG6629 FBgn0037860 FBtr0082380 2 1 1 128 3R 6941245 6941316 AACACTTGTCGCTCATTGG 58 6941135 6941156 ACTAGCCTTATGATCCTTTGGG 59 NA Drosophila melanogaster 61 CG12807 FBgn0037772 FBtr0082171 2 1 1 80 3R 5825468 5825562 AAACGACTTGCAGAATATGGG 59 5825658 5825676 CCCTTCTCCTCAGTCATGG 59 NA Drosophila melanogaster 61 CG8481 FBgn0037747 FBtr0100583 3 1 2 111 3R 5594553 5594655 ACTATGAAGGGCTTCCTCC 58 5594730 5594748 CACTCTGCGTTGATTAGGG 58 NA Drosophila melanogaster 61 CG16790 FBgn0037713 FBtr0082112 2 1 1 93 3R 5395403 5395423 CAGATCGATGAATTCTCCCGA 59 5395269 5395287 CATTCGTGTAGATCCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117,FBtr0082118 2 3 3 84 3R 5367294 5367414 GGAACTTGAATAACCACTTTGG 57 5367231 5367250 AAGTTGTACGAAGAACCCTC 57 NA Drosophila melanogaster 61 alpha-Man-II FBgn0011740 FBtr0082031 2 1 1 80 3R 5239051 5239069 ATCTCCTACTTTGCTCGGT 58 5239110 5239463 CTGTCCATTCTTTACAATGGAC 57 NA Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091947 2 1 2 60 3R 5181416 5182097 TGTAAATAAGGCGCACTAACC 58 5182117 5182137 TCGCATCGAAGTATAGGAGAG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9836 FBgn0037637 FBtr0081930 3 1 1 106 3R 4648787 4648996 GAGCTCTGTGAGTGATTGG 58 4648699 4648720 GCATTCATACAAGATCAGTTCC 57 NA InUTR Drosophila melanogaster 61 Obp85a FBgn0037589 FBtr0081849 1 1 1 88 3R 4246076 4246295 TCCATGTTCCTAACACGTCC 59 4246007 4246025 AAGTTGAATTTCCGGTGCG 59 NA Drosophila melanogaster 61 DppIII FBgn0037580 FBtr0081840,FBtr0081841 1 2 2 72 3R 4171069 4171087 CTGTTCTTAGGGCGAAAGC 58 4171182 4171200 CAGGCGTACACTAGGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301217 3 1 2 106 3R 3826730 3826819 TGAACAATTTGGTCCGTGC 59 3826584 3826660 ATATCGCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 lds FBgn0002542 FBtr0081758 2 1 1 93 3R 3747548 3747867 ATCGCTAAAGGACCTCCAC 59 3747921 3747942 GTTCATAAGCGATACCTTCAGG 59 NA Drosophila melanogaster 61 CG2678 FBgn0014931 FBtr0081757 3 1 1 88 3R 3740989 3741647 CTAAAGCCGAAACCGATATGC 59 3741697 3741715 TGGCGATTGTGAGTAAGCA 59 NA Drosophila melanogaster 61 alphaTub84D FBgn0003885 FBtr0081539 3 1 2 155 3R 3356700 3356924 AAATCGATTGTCGCGTGTG 59 3357043 3357061 CTCCAGGCAATAGAGCTCC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG34023 FBgn0054023 FBtr0100078 1 1 1 74 3R 3246062 3246086 GAGAGTTCTTATAAGGTATACCGTG 58 3246186 3246204 ATCACCAATGCTGACAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 1 1 1 60 3R 3244798 3245110 AAATCCAGGGTTGTGATGG 57 3245133 3245152 GGGAAATTGGACAATTGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081590 3 1 2 60 3R 3187394 3187417 CCCACCTATAATAATGAGGTAGAC 57 3187357 3187378 TGAACAATCTACTTTCGTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17944 FBgn0037500 FBtr0081589 2 1 2 160 3R 3187291 3187413 CCTATAATAATGAGCACCGCC 58 3187151 3187171 CTAGTGCAAGTGTAGCAACTC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 3 4 11 88 3R 2735065 2735083 GATCAAATGTCCGGTCACC 58 2734444 2735014 TGATGGTTCTGATGGACCTG 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081664 2 1 5 243 3R 2582672 2584836 TCGATTTGATCTTGGAGCC 57 2582447 2582468 GGATTATACGCTTGCATTATCG 57 NA DesignRelaxed Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081686,FBtr0081685,FBtr0081684 3 4 4 81 3R 2478390 2478480 AAACATTGAAGCTCATCGCT 58 2478524 2478542 GTACTGCTCACAGTTGGTG 58 NA Drosophila melanogaster 61 CG15184 FBgn0037459 FBtr0081680 3 1 1 127 3R 2445719 2445865 CAGGACTCCCAACATCCTG 59 2445956 2445974 TTAGCAGTTCTCGGCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Obp83g FBgn0046875 FBtr0078617 2 1 1 173 3R 1937952 1937970 AAATGCAGTCCCAATCCCT 59 1937734 1937753 CGTAGTTCAGGTACTTCTCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sym FBgn0037371 FBtr0078723 1 1 1 80 3R 1567428 1567510 GAGCAAGTTTGTAAAGTGAAGG 58 1567369 1567387 AGCCGAGTTATCCCTAAGC 59 NA Drosophila melanogaster 61 CRMP FBgn0023023 FBtr0114453,FBtr0089685,FBtr0089684,FBtr0089686 3 4 4 81 3R 1400704 1400973 ATCCTAAGGTATGCTGCGA 58 1401018 1401036 AGAATGCCGATCTCCTCAG 59 NA Drosophila melanogaster 61 CG14667 FBgn0037317 FBtr0078788,FBtr0100433 2 2 2 70 3R 1200878 1200897 CATATTCATTCACATGCGGG 57 1200930 1201009 TTCTTGTCAGCTCCACTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG1129 FBgn0037279 FBtr0078871,FBtr0078870 3 2 2 86 3R 640425 640445 ACAGGAGTTGTATGCAATGGA 59 640493 641024 AGATACAGACACATGCCGG 59 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078942,FBtr0078939 1 3 4 80 3R 272535 273432 TCACATAGTGACTCGAGGAC 58 272474 272493 GACATATGTGAGGCAAACGG 59 NA Drosophila melanogaster 61 CG9766 FBgn0037229 FBtr0078980,FBtr0113191,FBtr0078979 1 3 3 92 3R 95629 95647 TAGTCAAGTTCGCTCTCGA 58 95496 95573 TAGCGTTCATAACCACTGC 58 NA Drosophila melanogaster 61 Dsk FBgn0000500 FBtr0078989 2 1 1 60 3R 15636 15657 TCCTCATGGATAATGATGACGA 59 15597 15618 ATATGGCCGTAATCATCAAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR32330 FBgn0052330 FBtr0072682 1 1 1 60 3L 1379942 1379963 TGTCTAGTGGTTAGGATATCCG 58 1379984 1380002 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U5:63BC FBgn0003938 FBtr0073017 1 1 1 70 3L 3090804 3090824 CTGGTTTCTCTTCAATTGTCG 57 3090856 3090874 TAGAGTGTTCCTCTCCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111144 1 1 3 60 3L 24530681 24530702 CATTGGTTTACGTAATACCAGC 57 24531015 24531035 CGAAGGGTCATTATTACTGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524 1 1 2 100 3L 22710940 22710958 TATCAACTCTGACTCCGGC 58 22711108 22711126 CTCCGATATCCCGTCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15374 FBgn0037152 FBtr0078483 2 1 1 60 3L 22158544 22158563 TAACGATGTAACCGCTACAC 57 22158585 22158604 CGAAGGATTTCTGGATACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7133 FBgn0037150 FBtr0078485 2 1 1 60 3L 22067406 22067427 GTCTACGAAGATCACTACCAGG 59 22067367 22067385 TAATCTCACTGTCGGTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078473,FBtr0078474 2 2 2 97 3L 21943417 21943435 CTACTTGCTGCTTTGCCTG 59 21943496 21943569 TTGTGATGTTGCACCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14574 FBgn0037104 FBtr0078467 3 1 1 61 3L 21574212 21574231 GTTACTCCTCGTGAGAGGAG 59 21574170 21574188 TCCAGGTCGTACATGATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 VhaM9.7-2 FBgn0028663 FBtr0078369 1 1 1 156 3L 21533136 21533154 TTCATTGGCATCATCTGCC 58 21533412 21533430 CGTTCATGCTTAGTTTGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5664 FBgn0037082 FBtr0078397 1 1 1 99 3L 21433681 21433701 ATACATTCCTGGACATTCTGG 57 21433544 21433620 GCAATTAGGATCATGGCCA 58 NA Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349,FBtr0078350,FBtr0078348 2 3 3 132 3L 21429091 21429109 CATGTGAAGATCCACACGG 58 21429265 21429286 TGATCTTAACAGGAACGTAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33284 FBgn0053284 FBtr0078291 3 1 1 61 3L 21117590 21117610 TAAGTCTAGATTGCCAGTTGG 57 21117633 21117651 CTCCGTTAGCTCGTTAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13255 FBgn0040636 FBtr0078263 2 1 1 60 3L 20831514 20831534 CTTGGCCTACGTCTTTATGTC 58 20831554 20831574 CACATTGACCAGTATGAAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 2 2 2 99 3L 20783888 20783907 CATATCCAATCTCACAGCCG 58 20783742 20783826 CATGCACTGGATCTGATCC 58 NA Drosophila melanogaster 61 CG11396 FBgn0037022 FBtr0078276 2 1 1 84 3L 20779926 20780005 AGGAGATTAAGGGAGATAAACTCC 59 20779865 20779883 GAAAGTCGTTCTTGGCCAC 59 NA Drosophila melanogaster 61 CG4074 FBgn0037017 FBtr0078280 1 1 1 118 3L 20761742 20761760 ACCCATCCATATGGTCCTG 58 20761578 20761596 CACTAACCGTGTAGTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4858 FBgn0037011 FBtr0078210 1 1 1 80 3L 20519856 20519949 GGATTTAAGGTTGGTCTGCTC 59 20519990 20520009 GATATCCCGTCCTTCCAGAC 59 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 3 3 3 92 3L 20426680 20426753 TATTTGGAAGAGCTTCTTCGC 58 20426807 20426825 CATCATTCCGACCACTCCA 59 NA Drosophila melanogaster 61 NPFR76F FBgn0036934 FBtr0074871 3 1 1 109 3L 20067295 20067314 GAGACGAGTACGAGTCACTG 59 20053820 20067225 ATCCTATCTCAGTTGATTCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Gbeta76C FBgn0004623 FBtr0074949 2 1 1 129 3L 19681903 19681927 GATATGAAGACCTATATCACTGGCT 59 19682014 19682171 CACTGGGATGGTAGCAGAC 59 NA Drosophila melanogaster 61 825-Oak FBgn0052208 FBtr0273406 1 1 1 88 3L 19465196 19465273 TCAAATACGCTGTCGTCGT 59 19465126 19465144 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 cln3 FBgn0036756 FBtr0075167 1 1 1 96 3L 17803101 17803121 GCTCTTCTATATCAAGCACCT 57 17802968 17803043 AACCAGTTCGAACAATCCT 57 NA Drosophila melanogaster 61 sec3 FBgn0086475 FBtr0075231 3 1 1 83 3L 17415683 17415702 AAGTGTTATAACGATGCGCT 58 17415541 17415639 GCCTTCGAAGAATTGATTCAG 57 NA Drosophila melanogaster 61 beg FBgn0036691 FBtr0075278 1 1 1 60 3L 17029412 17029431 CGGATACCAATCTGGGAGAG 59 17029454 17029472 ACTCCTTTGTCCAGACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smn FBgn0036641 FBtr0075395 2 1 1 60 3L 16574113 16574131 AAGAAGCTGGCGAGATCTC 59 16574071 16574090 TTGAAGGATACTGGTTCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33061 FBgn0053061 FBtr0113448 3 1 1 92 3L 16323161 16323179 TATACTGGGCAACCTGCTC 59 16323234 16323358 ATGCAGTACCAGATCAACGA 59 NA Drosophila melanogaster 61 Pgm FBgn0003076 FBtr0075492 2 1 1 125 3L 16119537 16119555 AGATCCTGTCGACAAGTCG 59 16119364 16119448 TCAATGTACAAGCGAACGG 58 NA Drosophila melanogaster 61 CG5389 FBgn0036568 FBtr0075446 2 1 1 83 3L 16091023 16091104 AAATGGCTACAGCATGTGC 59 16091148 16091169 CAGGATTACCAAGATAGTTGCC 59 NA Drosophila melanogaster 61 CG13445 FBgn0036532 FBtr0075503 1 1 1 80 3L 15802619 15802702 TTCGTGTTCTTTGGTATCATCG 59 15802741 15802761 GATCACATCATCACCCTTGTC 58 NA Drosophila melanogaster 61 CG32148 FBgn0047338 FBtr0075630 2 1 1 77 3L 15016816 15016897 TGCTTTAAGAAGTCCGAACC 58 15016937 15016955 ATCTTTGCAAGGATCCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG17361 FBgn0036395 FBtr0075767 1 1 1 60 3L 13990432 13990454 CTAGACATCTACGACAACAAGAG 58 13990474 13990492 TGGTTCGCTGTAGATCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14107 FBgn0036351 FBtr0075866 1 1 1 105 3L 13374353 13374371 TAGACCCATTTACCTGGCC 58 13374203 13374221 GACGGCTAACTCCTCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14115 FBgn0036343 FBtr0075893 3 1 1 94 3L 13054325 13054402 ATCCTTTGGTCTACTGGCTG 59 13054250 13054268 GCAGTGCATAGTTGGACTC 58 NA Drosophila melanogaster 61 CG10752 FBgn0036325 FBtr0075903 3 1 1 111 3L 12947013 12947032 TAAGATGGATATCGACGGCG 59 12946733 12946757 CTCATAGTTTGATATTAGCCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354,FBtr0075950 2 2 2 200 3L 12746676 12746694 AGTGTTTCCTGTGCTAGTG 57 12746434 12746513 TTAACCATGTCTTCACACGT 57 NA Drosophila melanogaster 61 eap FBgn0052099 FBtr0076000 3 1 1 60 3L 12143220 12143240 CGTGGAAAGTTCAAGTTTCTG 58 12143259 12143280 GTTCCGAATCTTCACTCTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33267 FBgn0053267 FBtr0089845 3 1 1 60 3L 11557925 11565513 AACTACAGATGATGCCACCA 59 11565536 11565554 GGTAGTGGTGTCCGAAGAC 59 NA DesignRelaxed Drosophila melanogaster 61 chrb FBgn0036165 FBtr0076093 2 1 1 100 3L 11487746 11487764 GATCATCCGGATGTCGGAG 59 11487828 11487959 AGTATGCAATGCGCTTGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 l(3)01239 FBgn0010741 FBtr0076238 3 1 1 84 3L 11067218 11067238 GAAATGGATTTGAGGGAACAC 57 11067050 11067068 CACCAATTTGACGAAAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG32069 FBgn0052069 FBtr0076241 1 1 1 117 3L 11055607 11055628 ACACTGATTGAATCTTCACTCC 58 11055445 11055463 TAGGTGCTCCAAAGTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 1 3 3 96 3L 11051889 11051907 AATGACTATGTGGCCAAGC 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 Fad2 FBgn0029172 FBtr0076196 3 1 1 60 3L 11016721 11016739 TAAGCAATCGGAAGACCAC 57 11016761 11016781 AGCACTATATTGACCCATACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14147 FBgn0036112 FBtr0076194 2 1 1 95 3L 10965836 10965924 GAATGAAGTTCTTCGTGTGCA 59 10965981 10965999 GGTGGTAACCATGATGGCT 59 NA InUTR Drosophila melanogaster 61 Cpr67Fb FBgn0036110 FBtr0076193 2 1 1 129 3L 10887302 10887384 CGCGCTAATCATTTCCCTG 59 10887477 10887495 GTTGGACGTTCCGTATTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG6418 FBgn0036104 FBtr0076274 1 1 1 60 3L 10870270 10870288 GGTAAACTACGACACAGCC 58 10870228 10870246 GCCCGTTCTTCCAATTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42519 FBgn0260394 FBtr0300667 3 1 1 82 3L 10618426 10618504 TCATTGCCCAATCTCTTGAC 58 10618363 10618381 TTCAGCATCAACAGGTAGC 57 NA Nonspecific Drosophila melanogaster 61 Nc FBgn0026404 FBtr0076347 2 1 1 119 3L 9962428 9962955 TAGCAAGCTCCGGAATGAG 59 9963038 9963056 TATGTGCCCAATATGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG16711 FBgn0036032 FBtr0076396 3 1 2 225 3L 9701356 9701374 ACTACGCTCCAGTAAAGCC 59 9701563 9701650 TTGTTTGGGATTGCTTCCG 59 NA DesignRelaxed Drosophila melanogaster 61 alphaTub67C FBgn0087040 FBtr0076393 2 1 1 192 3L 9674512 9675016 AAATGCGCGAAGTAGTCTC 58 9675172 9675190 AAGAAGGTCCTAGCATCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16717 FBgn0036028 FBtr0076392 1 1 1 97 3L 9672497 9672515 AACAATCAGAAGTCGGCGA 59 9673009 9673027 GGATGTACTGGCACTTCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Hsp26 FBgn0001225 FBtr0076496 2 1 1 62 3L 9370259 9370277 TACTCTGCTTTCGCTTGTG 58 9370215 9370233 AGTCCAAGCTCGTAGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4477 FBgn0035971 FBtr0076430 2 1 1 99 3L 9243954 9244043 CGTATGTATAAAGGCGGTCC 58 9244105 9244123 CGGATGGAACTCTTAGCCA 59 NA Drosophila melanogaster 61 CG5087 FBgn0035953 FBtr0076520 1 1 1 80 3L 8992684 8992759 TCCACTACTGACTGAAACCA 58 8992797 8992820 CACTGAGTAAATACTCCCTTAGTG 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209,FBtr0300208 3 2 2 80 3L 8889168 8889243 CAATACTGCAATATGGGATGGG 59 8889109 8889129 ATCCAAACGAATCTGTGATGC 59 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 2 2 2 93 3L 8669373 8669392 CAACATGACCAACGTTCTGG 59 8669448 8670489 CATGATGGGCTTGTTCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Cpr66D FBgn0052029 FBtr0076567 1 1 1 89 3L 8633864 8633882 AGGATCAAGGATACGGTGG 58 8633930 8634022 CTGATATTGCTGATAATCCCTGAC 59 NA Drosophila melanogaster 61 CG32353 FBgn0052353 FBtr0076631 1 1 1 60 3L 8584417 8584437 TTATACCAGCCACAGCTACTC 59 8584459 8584477 TGGTGTGATGGGAAGAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6915 FBgn0035898 FBtr0076658 3 1 1 109 3L 8470563 8470581 AGAGCAACACAATCAAGCG 59 8470410 8470492 GGGCAAGACCTAATTGATGTC 59 NA Drosophila melanogaster 61 CG13670 FBgn0035873 FBtr0076708 1 1 1 90 3L 8314327 8314903 GAGTGTACAGCGTAGTCGA 58 8314957 8314975 GTAATGACCTCGGCTTGGA 59 NA Drosophila melanogaster 61 CG32368 FBgn0052368 FBtr0076749 3 1 1 83 3L 7908606 7908626 TTGCAATGAATCATGTGGTGG 59 7908671 7908689 TCCTCATTTCGTGCTCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7716 FBgn0035800 FBtr0076824 3 1 1 60 3L 7582204 7582222 TTTGACCTTAACGGTGGAC 57 7582162 7582183 GCTCTCCAATTTGTTTAGTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eco FBgn0035766 FBtr0100278,FBtr0076882 1 2 2 149 3L 7329059 7329077 ATGGCACGGACTACTTCAG 59 7328866 7328884 TAGCGATCTCTTGACCGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Cpr65Eb FBgn0035736 FBtr0076928 2 1 1 113 3L 7081719 7081808 TGTCGAAGATCAACGTCGT 59 7081624 7081642 GTTCGTTGACAAAGCTCCG 59 NA Drosophila melanogaster 61 Cpr65Eb FBgn0035736 FBtr0076928 1 1 1 107 3L 7081719 7081808 TGTCGAAGATCAACGTCGT 59 7081630 7081648 TGACAAAGCTCCGGATCTC 59 NA Drosophila melanogaster 61 Mis12 FBgn0035725 FBtr0076936 3 1 1 80 3L 6962013 6962032 GGACTTCAATAGCCTAGCCT 59 6961889 6961970 ACAATATGTTCGCGCTCTG 58 NA Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 1 2 2 82 3L 6734855 6734874 GGAGATACCGTGTATTTCGC 58 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 CG32394 FBgn0052394 FBtr0076955 1 1 1 80 3L 6730766 6731815 GAGTGGCGATGACTTTACC 58 6730704 6730723 CGATGGTTCTTCACGTAGAC 58 NA Drosophila melanogaster 61 Cpr65Av FBgn0052405 FBtr0077024 1 1 1 155 3L 6132697 6132825 ACAACTTCGGCTACGAGAC 59 6132560 6132578 CATCCGCAATGTAGTGCAG 59 NA Drosophila melanogaster 61 CG10469 FBgn0035678 FBtr0077064 1 1 1 80 3L 6085997 6086017 GGCACTATCCTCAGTAATCGT 59 6085878 6085958 CAGCACTTTCCAGAGATTAGAC 58 NA Drosophila melanogaster 61 CG6610 FBgn0035675 FBtr0077048 2 1 1 120 3L 6068781 6068871 GCCATTGGAATTGGTGGAC 59 6068953 6068973 GTCGTCCAAGAGCATATTCAC 59 NA Drosophila melanogaster 61 CG10472 FBgn0035670 FBtr0077066 1 1 1 93 3L 6054827 6055387 CAAGATCAGCGACTCTGCT 59 6054752 6054770 GAAGTACCAGGGAGAGCAG 59 NA Drosophila melanogaster 61 CG10672 FBgn0035588 FBtr0077179 2 1 1 120 3L 5134025 5134043 AGAGTTCCTATCTGCTGGC 58 5133861 5133942 GAATAGGCTCCCAGTAGCTC 59 NA Drosophila melanogaster 61 CG4597 FBgn0035594 FBtr0077162 1 1 1 60 3L 5122826 5122844 CAGTTCAAGTGCCCTTTCC 59 5122868 5122886 TCTGACAGCTTCCTTACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11350 FBgn0035552 FBtr0073307 3 1 1 75 3L 4482846 4482931 GAAATTCTTCTTGTTCTGCGC 58 4482968 4482986 CAGGTACTGGCTAGATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32249 FBgn0052249 FBtr0073303 2 1 1 187 3L 4469071 4470103 TCTTTCTGGCTTGGCTCTC 59 4470252 4470272 GATAAACGGGAACCACTTGTG 59 NA Drosophila melanogaster 61 CG15023 FBgn0035548 FBtr0290225 1 1 1 60 3L 4461048 4461067 CAAACCAGTACCCACTTACC 58 4461007 4461025 GGTTGTGGTGGTAGTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073299 2 1 2 115 3L 4435077 4435180 TCTGTACATTCAGACCCGC 59 4435259 4435277 CATCCATCAGAATGCCCAC 58 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564,FBtr0302565 2 2 3 81 3L 4198924 4199006 CTGCAATAAGGTTTATTAGCGG 58 4199048 4199066 TGATCGTACAATCGAAGCA 57 NA Drosophila melanogaster 61 Ras64B FBgn0003206 FBtr0073212 1 1 1 198 3L 4139252 4139918 TCATCCAGAGCTACTTCGTC 59 4140135 4140153 CTGGAATGATCGTTGAGCG 59 NA Drosophila melanogaster 61 CG14980 FBgn0035470 FBtr0073180 1 1 1 118 3L 3898090 3898110 GGAAGATCATCCAATGAAGGT 57 3897929 3898010 CAACCTGGTCAGCATTCAG 58 NA Drosophila melanogaster 61 Fie FBgn0026592 FBtr0073157 3 1 1 80 3L 3894048 3894068 TCTACGCACCATGAATAAGCT 59 3894109 3894182 AAACGATAGGGTATGGCTCC 59 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 1 2 2 80 3L 3812403 3812480 GTGCTCATTGGTTTACTCGT 59 3812521 3812541 GTACGGAGTCACTATCAACTG 58 NA Drosophila melanogaster 61 CG32281 FBgn0052281 FBtr0073034 1 1 1 60 3L 3169937 3169956 GAAGGTCTCACCTCCTACTC 58 3169975 3169997 GATGATCACGAAGATTAAGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rasp FBgn0024194 FBtr0073029 3 1 1 60 3L 3162798 3162818 GGATCTTACGAGATACAGCCT 59 3162839 3162858 CAGACAGGGAAAGTACATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072995,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072993,FBtr0113130,FBtr0113129,FBtr0072999,FBtr0072992,FBtr0072996,FBtr0073001,FBtr0113131 1 15 15 80 3L 3087427 3087510 ATATGCATCAGCAGGACGA 59 3087553 3087572 GTTGCACGGATTGAAGACAG 59 NA Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776,FBtr0301580,FBtr0072975 1 4 4 161 3L 2925330 2925348 AAGGAGAACGTTCACGAGG 59 2925473 2940795 TATCACTGCGATAACCCGG 59 NA Drosophila melanogaster 61 CG1146 FBgn0035346 FBtr0072923 1 1 3 171 3L 2490481 2490993 GAAGAAAGAGTGATGTGATGTC 57 2491125 2491143 GTATTCCGTGTAGTCCGTC 57 NA InUTR Drosophila melanogaster 61 DmsR-2 FBgn0035329 FBtr0113126,FBtr0072885 3 2 2 80 3L 2299262 2299769 ACCTAAAGCTGAGTGACCT 57 2299813 2299831 GGCTCATCGAACAGTACAG 58 NA Nonspecific Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100647,FBtr0100646 1 3 3 81 3L 1255033 1255494 AAGGGTATCGAGGTTTGCT 58 1255539 1255557 ACTTGGCCTTACTTCCCAG 59 NA Nonspecific Drosophila melanogaster 61 Reg-2 FBgn0016715 FBtr0072561 2 1 1 113 3L 606428 606446 CTCCAATTCCGAACCACTC 58 606276 606351 CATCTTGTACCAGTTGGCC 58 NA Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 3 2 2 60 3L 360681 360759 GAGTACTTGCTAGACCAAGC 58 360640 360658 GAGGATCATCCATCGTGTC 57 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Or-aca1 FBgn0082925 FBtr0113530 3 1 1 60 2R 18495113 18495131 TAAGTGCATGTCGCAATCG 59 18495152 18495173 GAAGCCTCAAATAACAATGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Or-aca4 FBgn0082922 FBtr0113512 3 1 1 60 2R 13504275 13504293 GTGGCAAGAGTAGCTACTG 57 13504316 13504335 TTTGATCTACCTTCAGCGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir48a FBgn0053471 FBtr0088081 1 1 1 60 2R 7586961 7586980 TGTGAGAACAGTGTCTTCAG 57 7586920 7586940 TAGACGAACATATCCATGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30029 FBgn0050029 FBtr0088109 3 1 1 60 2R 7133872 7133890 CTACGGACATGGTCATCAC 57 7133913 7133932 ACACTAGCGACCATAATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a14 FBgn0033302 FBtr0302331 3 1 1 91 2R 4452395 4452413 AAGTGTGCTAGCCAATGTG 58 4452265 4452340 GAAGAGTTTCCGACAGCAC 58 NA Drosophila melanogaster 61 tRNA:CR30449 FBgn0050449 FBtr0086333 2 1 1 60 2R 15616796 15616815 GTCTAGTGGTTAGGCTACCC 59 15616837 15616856 CCTATACAGGGAACTGAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Yu FBgn0061188 FBtr0302365 3 1 1 63 2R 20385999 20386017 AAGAATCCACAAGGTCCCG 59 20386043 20386062 CAATCGAGATGGCAATGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0072453 1 1 2 83 2R 21073904 21073925 GTTCGATTATCGTAAACACCAC 57 21073791 21073862 CCTGAGTATAAGTTGCCTGTG 58 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0100299 3 1 3 156 2R 20758659 20758677 CATCAAACAGAACGCCCAG 59 20758848 20758868 GAGCAAGTGTATACTGGATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG3611 FBgn0035069 FBtr0072377 2 1 1 60 2R 20686771 20686792 GACCAGATCTATCTGACGAGTC 59 20686813 20686831 TGGCGTACTTGAGGAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33988 FBgn0053988 FBtr0100033 1 1 1 228 2R 20588722 20602001 ACTGCAAGGAAGCATATCG 58 20588512 20588530 TCGTTCATGTTATTGCCGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG3511 FBgn0035027 FBtr0072309 1 1 1 80 2R 20461398 20461416 AGGCTGTTCTTCAAGGAGG 59 20461457 20461537 TATGTGTCCATTGTAGTACCCA 58 NA Drosophila melanogaster 61 CG3419 FBgn0035002 FBtr0072291,FBtr0072292 3 2 2 90 2R 20299632 20299708 GGTAATGACTGGCGATCAC 58 20299762 20299780 GAAGGGCAGAACGATTGAC 58 NA Drosophila melanogaster 61 DnaJ-60 FBgn0260775 FBtr0301272,FBtr0301271 1 2 2 80 2R 20046438 20046510 AGCTCTCCAAATTGTACCAC 57 20046377 20046396 CGGAGATCTGAACAAATCGG 58 NA Nonspecific Drosophila melanogaster 61 CG3253 FBgn0041706 FBtr0072251 1 1 1 80 2R 20003513 20003531 TACATAGCAGTGGACAACG 57 20003574 20003649 CTCATAAACCTGGGAGTTCC 57 NA Drosophila melanogaster 61 CG18128 FBgn0034898 FBtr0072094 2 1 1 60 2R 19606525 19606544 CTTTGTGGTTATCAGCAGGG 59 19606484 19606503 CTTGTCCTTATCGCTCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072105 3 1 4 135 2R 19496194 19496945 CGAGATTCGTTGCTGTAAGG 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA Drosophila melanogaster 61 CG5357 FBgn0034862 FBtr0072017 1 1 1 60 2R 19344604 19344624 CCGGATATTGGTGTCAAACAG 59 19344646 19344664 CCTCCTGGTAATTGGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3500 FBgn0034849 FBtr0072038 1 1 1 143 2R 19244488 19244506 GCATCATGAGTGGATTCCC 58 19244178 19244381 TAAAGTAAGCCAGCACCTG 57 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0071954,FBtr0071955 2 2 3 87 2R 18947708 18947726 CTCCACCGTGGTCATAAGG 59 18947777 18947853 AATGTACTGTCCCACCGTG 59 NA Drosophila melanogaster 61 bonsai FBgn0026261 FBtr0071860 2 1 1 86 2R 18525490 18525508 GATTTAGCCAAGCTGCCTC 59 18525558 18525635 TGACTCGTCGGCTTTATCC 59 NA Drosophila melanogaster 61 Oatp58Dc FBgn0034716 FBtr0301476,FBtr0113105,FBtr0071777 2 3 3 80 2R 18113468 18113488 CTATACTACACGTTGGGAGTG 57 18112902 18113429 GTATGAAAGACTCAACAAAGCC 58 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0113103 2 1 2 82 2R 17974817 17975966 GATACAACCAGATTCTTCCCAG 58 17974756 17974774 GTCCACAGCAAGAATGGTG 59 NA Drosophila melanogaster 61 CG13500 FBgn0034683 FBtr0071805 3 1 1 60 2R 17944552 17944570 TCTGTTTGGAGATCCTGCG 59 17944510 17944528 ATCTGTCGTCTCTGTAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4377 FBgn0034664 FBtr0071739 3 1 1 102 2R 17723319 17723402 GTTCTGATTCAGCTGATTGC 57 17723236 17723257 ACTACCTTGACATAACAGTAGG 57 NA Drosophila melanogaster 61 CG30285 FBgn0050285 FBtr0071678 1 1 1 60 2R 17575974 17575992 TTTCATAGTGAGCACGCTG 58 17575864 17575885 TCTTCCATCATAATTCTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10505 FBgn0034612 FBtr0071619 3 1 1 80 2R 17174515 17174595 GATTGAGAGCTTAACACGCAG 59 17174455 17174473 TCCATGGACCTAATGGTCG 58 NA Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112645 2 1 2 80 2R 16987554 16987725 CGTGATCACAACTATAGGTTACG 59 16987764 16987783 ATGATGGCATAGACGATGGT 59 NA Drosophila melanogaster 61 dpr FBgn0040726 FBtr0086238 1 1 1 80 2R 16634958 16634976 GATACCGGCAACTACACCT 59 16635017 16635841 AGGATGTTCGCCAATAATTACG 59 NA Drosophila melanogaster 61 CG33786 FBgn0061361 FBtr0091787 3 1 1 216 2R 16531001 16531094 CTCAAGGAGGTGGATCACG 59 16530803 16530821 TAAAGGCTCGTTTGAAGGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG16742 FBgn0034529 FBtr0086227 1 1 1 80 2R 16511667 16511736 CACTCAACAACCGTATTCCG 59 16511779 16511797 CTGCCACTCTTTGGTACCA 59 NA Drosophila melanogaster 61 CG15128 FBgn0034467 FBtr0086481 3 1 1 83 2R 15574198 15574218 AGACACATCGTAACATGAACC 58 15574048 15574153 CGAATTTCGCCAATTGCTG 58 NA Drosophila melanogaster 61 CG16716 FBgn0034459 FBtr0300829 2 1 1 80 2R 15483183 15483201 ACGAGCAGAATAAGCAACC 58 15483242 15483318 TTTGTATTGCCTGGAGATTCAG 58 NA Drosophila melanogaster 61 CG33454 FBgn0053454 FBtr0086565 3 1 1 88 2R 15138673 15138752 TTCTTGCCCGTATGGTACG 59 15138603 15138625 GGCGTGATAAATAATCTCCAGAG 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 3 5 5 105 2R 15023519 15023537 GATCAACGGCTACAACTGC 59 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 CG30116 FBgn0028496 FBtr0086721,FBtr0086719,FBtr0086720,FBtr0086718 3 4 4 80 2R 14363666 14363685 GGCTATGTTGGTTAAGTGGT 57 14363163 14363625 ACGTTCATAAGGCGATAATCC 58 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 3 6 6 131 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175122 14175141 CAATATTCCACTCGTCCTCG 58 NA Drosophila melanogaster 61 CG10916 FBgn0034312 FBtr0086749 1 1 1 60 2R 14061970 14061988 TTTACCAGGGTATCCTGCG 59 14062011 14062030 GGGATGTACATGACCTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086785,FBtr0086786 2 2 2 110 2R 13992672 13992690 AGTTCGATCTACGGCACAC 59 13992435 13992602 CGTAATAACCTTCATGTCTTCCC 59 NA Drosophila melanogaster 61 CG34386 FBgn0085415 FBtr0112627 3 1 1 81 2R 13978157 13980062 AACATCAACCAAAGGTCAGC 59 13980102 13980124 GTAACTCATTGTTGGTGTACTCG 59 NA Drosophila melanogaster 61 CG5757 FBgn0034299 FBtr0086787 1 1 1 84 2R 13982029 13982099 CAGGCTGTTGGTTGAACTC 59 13981963 13981981 CTGACCAATGCTGGAACTG 58 NA Drosophila melanogaster 61 CG5009 FBgn0027572 FBtr0089548 3 1 1 80 2R 13649724 13649743 AAGCCTGCATCATAGGAGAG 59 13649782 13649858 CAAGCAGAGCATTGTAAGTATCC 59 NA Drosophila melanogaster 61 CG10931 FBgn0034274 FBtr0089545 3 1 1 60 2R 13636709 13636729 AAGTTTAGTTCGAATGGCGAG 59 13636750 13636769 AGAGCTTAAGCAGCCTATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 3 1 1 70 2R 13557816 13557892 TATCAGGAGTGCGTCAAGC 59 13557926 13557944 CAGTACTCAGATCCGACCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG30106 FBgn0050106 FBtr0086893 3 1 1 115 2R 13538598 13538673 AGTAACCTGAAGCATCTCGG 59 13538502 13538521 TAGACCAGGAAGTGCAACAG 59 NA Drosophila melanogaster 61 CG18186 FBgn0034255 FBtr0086896 3 1 1 60 2R 13521531 13521552 GTGGAGAAGTTTCTAGGAAAGC 59 13521492 13521510 CCCACTTGGTCAGATACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bap55 FBgn0025716 FBtr0086960 1 1 1 89 2R 13317155 13317232 CGTTACTGGTGGCAATACC 58 13317084 13317102 TTTAGGCGCGTATTTGAGG 58 NA Drosophila melanogaster 61 CG10953 FBgn0034204 FBtr0086997 1 1 1 88 2R 13053877 13053968 CTGTCATCATGAAATTCCTGG 57 13053809 13053827 AGGAGAGTAGTCGTAACCC 57 NA InUTR Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 1 3 3 80 2R 12926020 12926103 TTGAGTTGACTCCAGACCG 59 12926145 12926165 TTATCGATATGTTCGCATCCG 58 NA Drosophila melanogaster 61 Cbp53E FBgn0004580 FBtr0087056 1 1 1 80 2R 12873645 12873663 GATTTGCTCAAAGAGGCCA 58 12873705 12874094 TACTTGGAGCATAGTATCGGT 58 NA Drosophila melanogaster 61 CG5348 FBgn0034156 FBtr0087022 3 1 1 88 2R 12654676 12654757 CAATGTTTACTATAGTCCTGCTCTG 59 12654801 12654821 CAAATGCCATCAGGGTAACTC 59 NA Drosophila melanogaster 61 CG7747 FBgn0034109 FBtr0087179 2 1 1 96 2R 12180220 12180298 GGCTCTCAGTTCTTTATCACC 58 12180144 12180165 TTTGAAGAGTGTCTAATCCTCC 57 NA Drosophila melanogaster 61 shark FBgn0015295 FBtr0087244 1 1 1 80 2R 12087827 12087847 GGATCATGGTCATGAGATCAC 58 12087708 12087785 TCCAGATAATGCATGCCAC 58 NA Drosophila melanogaster 61 Ir52c FBgn0050468 FBtr0087329 1 1 1 60 2R 11391833 11391851 AGAAGTCCTACGACACCCT 59 11391872 11391893 TCAAATAGAGAAGGAATGGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dro FBgn0010388 FBtr0087436 3 1 1 86 2R 10633639 10633657 GATCACCTGACTCAAGCTG 58 10633706 10633725 TTGATCGGATGACTTCTCCG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Cpsf160 FBgn0024698 FBtr0089257,FBtr0089258 3 2 2 81 2R 10389331 10389410 AACTAGAGGTGTATGGTTCTGG 59 10389271 10389290 ATTAGACTGTCGCACACCTC 59 NA Drosophila melanogaster 61 mam FBgn0002643 FBtr0087598 1 1 3 130 2R 9925841 9925862 ACTCTTAATGTCCGAACTACTC 57 9926239 9926257 CATTGTCAACATCCTCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6701 FBgn0033889 FBtr0087607 2 1 1 83 2R 9861905 9862103 CAAGCGAAAGAACCATGCA 59 9861840 9861859 TCATTCCCGAGGTTAAGCAG 59 NA Drosophila melanogaster 61 Cpr50Ca FBgn0033867 FBtr0087629 2 1 1 83 2R 9658511 9661706 CCACCTTAATGCTACTGATAATGAC 59 9661745 9661765 TTTCTAGGGATGGTAAACGCT 59 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091492,FBtr0091493 3 3 3 99 2R 9407188 9407340 CTGACTCACAGGATTGGCT 59 9407048 9407067 GTACCAGGTAAGATCGTCCA 58 NA Drosophila melanogaster 61 CG17724 FBgn0033802 FBtr0087771 2 1 1 163 2R 9072416 9072435 GGAAATGTCTATCAGCTGCA 58 9067606 9072290 TATATCGTAGCGGCAACAC 57 NA InUTR Drosophila melanogaster 61 CG8569 FBgn0033752 FBtr0087940 1 1 1 108 2R 8406759 8406777 TCAGCCATCCGTATTTGGA 58 8406849 8406932 ATAAACTGGCTGCTTCTGC 58 NA Drosophila melanogaster 61 CG8545 FBgn0033741 FBtr0087934 1 1 1 106 2R 8356346 8356426 AATCGTTTGCTCCCATGGA 59 8356495 8356514 CTGTAGTTTGGCCTTCTGGA 59 NA Drosophila melanogaster 61 CG33627 FBgn0053627 FBtr0091604 2 1 1 113 2R 8298860 8298878 GACATATGCCAGTTTGCCA 58 8298955 8299021 GTAAAGGCCCTTGGTATGC 58 NA Drosophila melanogaster 61 CG33013 FBgn0053013 FBtr0290072 2 1 1 80 2R 8252189 8252264 GAATTAAGCGAGACAGAGAATACTG 59 8252298 8252320 CGTGTAGTACACAAAGAACAGTC 59 NA Drosophila melanogaster 61 CG30049 FBgn0050049 FBtr0087906 1 1 1 80 2R 8245442 8245460 ATCCCGACATGTTGATTGC 58 8245501 8245574 ACATGTTTATCAGAGGAACCAC 58 NA Drosophila melanogaster 61 CG13167 FBgn0033706 FBtr0088000 2 1 1 85 2R 8145375 8145468 GGAGCATGTGGTAATACCC 57 8145517 8145535 GATAGAAATCCTCGCGCTC 58 NA Drosophila melanogaster 61 CG33964 FBgn0053964 FBtr0100005 1 1 1 103 2R 8070988 8071006 AAGAGCAAACAAGAACGCC 59 8071073 8071152 TAGATCCACCTCATGGCAC 58 NA Nonspecific Drosophila melanogaster 61 Drep-1 FBgn0024732 FBtr0087978 1 1 1 80 2R 7935684 7935986 ACATTGGATCGATCCCACTC 59 7936029 7936047 TTCAGCTCTCCGTTTCCAG 59 NA Drosophila melanogaster 61 TwdlBeta FBgn0033658 FBtr0088062 1 1 1 62 2R 7750688 7750706 TATCCTCCTTCTCTTGGCC 58 7750644 7750662 GATCTAGGTGGTTCCGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Egm FBgn0086712 FBtr0088090 2 1 1 192 2R 7505337 7505416 TACAACTGCAAGACCTGGA 58 7505163 7505181 AGATTCTGGGAGGCAATGG 59 NA Drosophila melanogaster 61 betaTry FBgn0010357 FBtr0088122 2 1 1 60 2R 7234352 7234371 ATGTCAACGTGAACATCGTC 59 7234394 7234412 TTTCCGTAGCCATAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299855,FBtr0299854 3 2 4 60 2R 7182410 7182429 CATTTCGCACAGACCTACTC 58 7182369 7182390 TGGAGACCAAGAGAAAGATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30033 FBgn0050033 FBtr0088117 1 1 1 85 2R 7180079 7180097 CAGCTTGTGTCTCTTGGTG 58 7180146 7180223 TGAAGTATGCTCCCACCTG 59 NA Drosophila melanogaster 61 dare FBgn0015582 FBtr0088176 1 1 1 80 2R 7179489 7179564 TGGATGCTTTGAAGACTACG 58 7179428 7179446 CCAAATGGACTCGTTCCAC 58 NA Drosophila melanogaster 61 TpnC47D FBgn0010423 FBtr0088184 3 1 1 112 2R 7162556 7162733 ATAACATTGACGAAGACCTGAC 58 7162465 7162483 GATATCGGCCACCATTTCG 58 NA Drosophila melanogaster 61 CG9084 FBgn0033582 FBtr0088197 3 1 1 80 2R 7106628 7106648 ACTTTGCAATACGACAGTGAG 59 7105868 7106590 GCTGATATGGGAGTCATAAACTC 58 NA Drosophila melanogaster 61 CG12344 FBgn0033558 FBtr0088246 2 1 1 80 2R 6718929 6718947 GCTTCCAGAGGTCTTTGAG 57 6717450 6718885 GTCAGTGTCGCTATTTCGG 58 NA Drosophila melanogaster 61 CG12325 FBgn0033557 FBtr0088227 1 1 1 80 2R 6713097 6713181 GTGGTGAAGAGATTGCTGTG 59 6713222 6713242 TAGTAGTAACTTGGCCAGCAG 59 NA Drosophila melanogaster 61 mms4 FBgn0033549 FBtr0088222 2 1 1 60 2R 6698672 6698693 GAACAACAGAAGCGTATTAAGC 58 6698714 6698732 CATCTATGACCATCCGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl13 FBgn0050018 FBtr0088220 2 1 1 81 2R 6679251 6679272 ACTGCTAATAACATCGTTCTGG 58 6679313 6679390 GGTTCCGTTCTTGTACAACG 59 NA Drosophila melanogaster 61 Ir47a FBgn0033515 FBtr0088323 2 1 1 60 2R 6266224 6266245 TCCAAGACGTAAGAAGATCCTG 59 6266185 6266206 CAGAATGCAACTAAATACCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088353 3 1 3 226 2R 6245024 6245042 GAGATCGCTCTCCAGATCC 59 6243980 6243999 CCCTATTCCTTGCCTTTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088331 3 1 2 100 2R 6029334 6029352 TGTCCTTCTCATGATGCAG 57 6029414 6029495 AGTTGACGATAGAACCAAAGG 58 NA Drosophila melanogaster 61 CCS FBgn0010531 FBtr0088424,FBtr0300944 2 2 2 106 2R 6009953 6010025 GCTCCATTAAGATCGAATTTGC 58 6009868 6009886 GGTGTCAATTTCCACCTGG 58 NA Drosophila melanogaster 61 CG11866 FBgn0033486 FBtr0088423 2 1 1 82 2R 6007480 6007559 ACTACAACTAAGCGACCCAC 59 6007604 6007622 ACCATATGGTTCTGAGGCG 59 NA Drosophila melanogaster 61 CG1671 FBgn0033454 FBtr0088373 1 1 1 168 2R 5735574 5735592 GTTCATGTTCTGATCCGCG 59 5735781 5735801 TTGAGGCAGTAAAGATGATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30001 FBgn0050001 FBtr0300074,FBtr0088492 3 2 2 80 2R 5709940 5710024 GCAGTACATCTTTAGCAAGGAG 59 5709881 5709902 AGAAGTTCGAACTCAGATTCCA 59 NA Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 1 2 2 80 2R 5471134 5471152 TGCTAAAGAACCAACCCAG 57 5471017 5471092 CAGGATCTGTAAGGATTTCCC 57 NA Drosophila melanogaster 61 CG13954 FBgn0033405 FBtr0113059 3 1 1 80 2R 5257871 5257955 GTTGTTAAGGTGATCGATCCTC 59 5257812 5257830 GAGCAGTAACAAACAGGCG 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088647 2 1 5 125 2R 4788928 4789842 CTAGTTTGGGCCTATCCGA 58 4789931 4789949 ATGACTCCGAGATCGTCTG 58 NA InUTR Drosophila melanogaster 61 CG8746 FBgn0033330 FBtr0088714 1 1 1 60 2R 4680471 4680489 GAGTTCCGTATTCCGAAGC 58 4680511 4680531 GTTCCAGCTTCTTTCTTTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718,FBtr0088720,FBtr0088719 2 3 3 87 2R 4607211 4607229 TCTACGGAACCATCAAGGG 58 4606986 4607161 GCGGTGAGAGTTGTAATAGC 58 NA Drosophila melanogaster 61 Cyp6a13 FBgn0033304 FBtr0088690 1 1 1 60 2R 4459453 4459474 GTAATTTCCTGATATCCACCCA 57 4459495 4459513 GGTCTTTCAAGTCCTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12780 FBgn0033301 FBtr0088736 3 1 1 60 2R 4439613 4439633 TGTTGATCTTGGGAATCAGAC 58 4439573 4439592 TCGGCCATCTTTATCCTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hubl FBgn0050364 FBtr0088772 1 1 1 60 2R 4249566 4249586 AAGAGAATTGTGCTTATGCCC 59 4249526 4249548 CGTGAATAGTTCGACAAGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088811 2 1 4 123 2R 4035890 4043568 GCCTAGCAGATCAGTAACAG 57 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088866 2 1 2 114 2R 3928614 3928711 TAAATAAGCATCCAGCATAGCC 58 3928786 3928804 CCAGTGAGATGTCCGAGTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG34431 FBgn0085460 FBtr0112732 2 1 1 60 2R 3833366 3833387 CAACACGATTCAACATATCCTG 57 3833406 3833426 TGGTTCTGATTCTCTTTGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 drosha FBgn0026722 FBtr0088850 1 1 1 91 2R 3823913 3823995 AAGAGTCCAACAATGCCCT 59 3824050 3824068 TTCGGAGAAGAGGTTGAGC 59 NA Drosophila melanogaster 61 Or43b FBgn0026393 FBtr0088887 3 1 1 89 2R 3808682 3808700 CAGTTCCTGCAGAAACTGC 59 3808548 3808633 CTTGGCTACATTGATGTTAGTGG 59 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 1 3 3 116 2R 3690701 3691032 GATATTTCCGAGACTTCATCGC 59 3690606 3690624 CATCACATTGTCCAGCACG 59 NA Drosophila melanogaster 61 CG12826 FBgn0033207 FBtr0088943 2 1 1 95 2R 3558424 3558505 GGATCTTAAGCAATTGTACTCG 57 3558350 3558370 CTATCCAAGTCGTAGTAGGTG 57 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 3 3 3 209 2R 3414715 3414733 CACTTTGCCACAACTGGAG 59 3414457 3414475 CAGACTCCTGGAGGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp9b1 FBgn0015038 FBtr0089056 3 1 1 107 2R 3015888 3015906 CCAGAGGTTTGACCCAGAG 59 3015703 3015817 TAGCGATTTCCAATGCAGC 59 NA Drosophila melanogaster 61 CG33914 FBgn0053914 FBtr0091918 1 1 1 80 2R 2925047 2925126 TTTCTAACAGAGTTGCATGGAG 58 2924988 2925006 CACGATACTCATGCTGAGG 57 NA Drosophila melanogaster 61 CG9460 FBgn0033115 FBtr0086164 2 1 1 84 2R 2775492 2775576 GGAGCAACCTTTATCAAGGTC 59 2775622 2775640 AGAAGAAGGGATGATCCGC 59 NA Drosophila melanogaster 61 CG9455 FBgn0033113 FBtr0086162 2 1 1 80 2R 2770074 2770093 GGATGTCGAGATCTTTCTGC 58 2770131 2770224 GTAATACCCAGCTGATTAAGTACC 58 NA Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301424,FBtr0301422,FBtr0086137,FBtr0086136,FBtr0301420,FBtr0301423 2 6 7 80 2R 2619684 2619758 GTTGTCGTATTCTTCTACGCTG 59 2619625 2619645 GCATTCGTCATCGATGTTCTC 59 NA Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 1 2 2 80 2R 2588430 2588449 TCAGGGAGTTGGAATGATCG 59 2588305 2588389 TAGAAGGTGTCATCCCATCTG 59 NA Drosophila melanogaster 61 CG15909 FBgn0033090 FBtr0086122 3 1 1 85 2R 2570753 2570834 GTTCTATGGTATGTCTTCGTGC 59 2570877 2570898 TCTGTCAAATTAGCTGTGAGTC 58 NA Drosophila melanogaster 61 Ptr FBgn0033068 FBtr0086003 2 1 1 85 2R 2073339 2073419 CTGTTTAGCATTATCACCTGCA 59 2073275 2073293 ATAATGGCCGAAACGTTGC 59 NA Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0112405,FBtr0302826 2 2 2 92 2R 1937564 1937582 CTCATGGCCTTCCTGTCTC 59 1937490 1937508 TGATGTGGTGTTGAACGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11665 FBgn0033028 FBtr0086072 3 1 1 99 2R 1531219 1531335 TTATAGTTCATTGGGCCCG 57 1531138 1531156 TATCATACCCAGTGACGCA 58 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273208,FBtr0273210 1 2 5 112 2R 1492008 1492095 AAGTTTGAGTACGCATTCTGTC 59 1491861 1491879 TAGTCACGCCTTCCATCTG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-G2743 FBgn0086034 FBtr0114310 1 1 1 62 2L 6745006 6745024 ATGATGAAGGGCGTTTCCT 59 6745050 6745068 GTGCAAGGAGTTCTATGCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR33318 FBgn0053318 FBtr0089857 2 1 1 116 2L 20924055 20924073 AGGAGAGCCAGTGATTGTC 59 20924210 20924228 ACACGTCTGCGTATAACTC 57 NA DesignNoJunction Drosophila melanogaster 61 snRNA:U5:38ABb FBgn0043021 FBtr0081294 1 1 1 60 2L 19816473 19816494 GAGAGGAACACTCTAATGAGTC 57 19816512 19816533 ATAGCATAAGTTATCAGGCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33857 FBgn0053857 FBtr0091861 1 1 1 60 2L 21525233 21525251 CGCTCAGGACTTTAAGACG 58 21525275 21525293 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33510 FBgn0053510 FBtr0300360 1 1 1 80 2L 21083659 21083678 GTTGAGTTCAGAAAGTGGCT 58 21083534 21083616 TAAGACAGCTCTTAGGCCC 58 NA Drosophila melanogaster 61 CG42238 FBgn0250867 FBtr0290306 2 1 2 122 2L 20968797 20968815 CACATGTGCGCTCTAAACC 59 20967653 20967672 TATGTGCTTGTTGTACTCCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9270 FBgn0032908 FBtr0081436,FBtr0081435 1 2 2 90 2L 20930076 20930153 CCTTAGAAGAGGTGCACCTC 59 20930005 20930023 ACACTGTAGTTGGATCCGC 59 NA Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0301291 3 1 2 92 2L 20820787 20820805 ACTACTGGTCGAGGATCCA 59 20820558 20820731 CTCATCCTAGCGTCGAAGG 59 NA Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0081361 1 1 2 122 2L 20451269 20451379 TGTAATAGGTGGCCATTTCCT 59 20451463 20451481 GAGTAGTCTACGGCCACTG 59 NA Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 3 2 2 243 2L 19767096 19767114 AAGACCTGGTTCCAGAACC 59 19766452 19766470 CATCCGTGGAGTAACCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 pigeon FBgn0010309 FBtr0081194,FBtr0302561 1 2 2 80 2L 19186181 19186258 AGGGCTATAAAGAGAAGGCA 58 19186301 19186319 CGAATATCCAGGACGTGAG 58 NA Drosophila melanogaster 61 l(2)37Cd FBgn0086445 FBtr0081156 2 1 1 108 2L 19127557 19127575 CTATCCATAACCGTGAGGC 57 19127647 19127722 CACAAAGCGTTTCAAAGGT 57 NA Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 3 2 2 84 2L 18712240 18712258 CGTGATCTATGCCAAGACC 58 18712096 18712192 GTCGCGATAACAGATCACC 58 NA Drosophila melanogaster 61 MESR3 FBgn0032694 FBtr0081073 3 1 1 163 2L 18631766 18649607 ACCGGAAACTTAAACCCGA 59 18660315 18660333 GGATGGAGAATCAGCTCGT 59 NA InUTR Drosophila melanogaster 61 CG31789 FBgn0051789 FBtr0081071 3 1 1 62 2L 18606091 18606110 CAGTCTCATCAGTTTCCCAC 58 18606196 18606215 ATGCTAATGTACCGAATGGT 57 NA DesignNoJunction Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 1 2 2 80 2L 18535125 18535202 CAACTCCTTCCAGATTAAAGCC 59 18535066 18535086 TGATCAAAGTGATGATGCTCC 58 NA Drosophila melanogaster 61 CG10178 FBgn0032684 FBtr0081068 3 1 1 85 2L 18512375 18512457 ATCAATTGAAGGACCTCTACC 57 18512504 18512522 GATCGATACTACGGTGAGC 57 NA Drosophila melanogaster 61 CG7200 FBgn0032671 FBtr0081062 2 1 1 82 2L 18157856 18157929 CAAGAACTCATGGACCTCCT 59 18157793 18157811 GCCATTTCTTAAGGCCCAC 59 NA Drosophila melanogaster 61 Socs36E FBgn0041184 FBtr0081041,FBtr0081040 1 2 2 82 2L 18141799 18141817 GTATTGCGAAGTGCTCGAG 59 18141242 18141753 TTCTGGAAACTGGCTTGCT 59 NA Drosophila melanogaster 61 CG31740 FBgn0051740 FBtr0081028 3 1 1 126 2L 18009065 18009085 CAACGTATTTCTTCAGCAGGA 59 18009309 18009327 CAGCAAAGCATCAGAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fws FBgn0024689 FBtr0081000,FBtr0080999 3 2 2 101 2L 17479236 17479257 TTGTATTGAGTATGCACAGGGA 59 17479098 17479174 ATCGGTTGACGAACTCCTG 59 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 3 1 1 96 2L 17012733 17012751 ACACCAATAACGACGACCA 59 17012594 17012674 TAGTCCACATTGCGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31806 FBgn0051806 FBtr0080952 2 1 1 65 2L 16985136 16985154 ATGAAGAGGACGTCATCCG 59 16985183 16985201 TATCAACTGGATCGCTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31809 FBgn0051809 FBtr0113414 3 1 1 194 2L 16853854 16853962 TGGATTACAGTACGCCCTC 58 16853678 16853696 CCACTGTTACAAACTGCGT 58 NA InUTR Drosophila melanogaster 61 CG31739 FBgn0051739 FBtr0080919 2 1 1 80 2L 16827880 16828060 CCTTTCAACATGGGTGGTC 58 16828103 16828122 CATATTGAAGTTGCTGGCCA 59 NA Drosophila melanogaster 61 CG17904 FBgn0032597 FBtr0080891 3 1 1 60 2L 16733501 16733523 GTTTAAGAATGTCACCACTGAGG 59 16733540 16733561 AAAGCTGGCCATAATCTTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18095 FBgn0028872 FBtr0080606 1 1 1 92 2L 14030747 14030765 TGCAGGACCTAGACTTGAG 58 14030489 14030691 GACTTATGTTGAGGCGCTC 58 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 2 2 2 80 2L 13985570 13985645 CGCAAATGCATAATCTCAGC 58 13985509 13985530 GCTCTTCGTTGAAGTTAATAGC 57 NA Drosophila melanogaster 61 CG33306 FBgn0053306 FBtr0080564 2 1 1 60 2L 13843628 13843646 GTTGCCGAACCTTTGTCAG 59 13843531 13843550 CCAATCCGTCCACAATTACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33307 FBgn0053307 FBtr0080565 1 1 1 80 2L 13841027 13841106 TCTTCGAAGAGTTCAAGGAC 57 13840966 13840986 GTGTCTTATATTGCAAGTCGG 57 NA Drosophila melanogaster 61 CG33649 FBgn0064115 FBtr0091626 2 1 1 60 2L 13832982 13833000 GGACTTCAAGCAGCTAACG 58 13832940 13832958 AAACTTCGAGTCCACTGGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5439 FBgn0032476 FBtr0080435 2 1 1 60 2L 13178607 13178626 TCACTGCTTAAGACCCATCC 59 13178649 13178667 CGAAATGCTTCTTTGGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 1 2 2 98 2L 13164196 13164326 CCTTCGATACGACCTGTCC 59 13164116 13164135 TCTGCTCTACGAAACCACTG 59 NA Drosophila melanogaster 61 CG31864 FBgn0051864 FBtr0080288 1 1 1 80 2L 11995875 11995894 TAGCCAATGTGGTTAGACAC 57 11995937 11996013 TCTCCCGGAATTCTTTGGA 58 NA Nonspecific Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 3 1 2 81 2L 11790100 11790181 AATATCAAGAAGCTACTGCTCC 58 11790277 11790298 GAACAGTCATCATCTTGATCAC 57 NA Drosophila melanogaster 61 CG14926 FBgn0032360 FBtr0080251 3 1 1 125 2L 11343036 11343108 TACTCACAGATGGGAAGGG 58 11342929 11342947 GTTATTCTGGTGCGATCCC 58 NA Drosophila melanogaster 61 l(2)gd1 FBgn0250747 FBtr0080197 2 1 1 80 2L 11110242 11110330 CATATGATCTAATGGATGGTCGC 59 11110369 11110388 TGGTGAGAATAGGATTGCGA 58 NA Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080156 3 1 2 185 2L 11011365 11011475 ACCAGAATTCTGCAACTGC 58 11011624 11011642 CTTGCAGATCGGTCTTGAC 58 NA InUTR Drosophila melanogaster 61 Porin2 FBgn0069354 FBtr0080184 3 1 1 92 2L 10846503 10846587 TCAGCCGGGATCAAATGAG 59 10846429 10846448 TCCGAGTTCAGTCCAATGTC 59 NA Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 1 2 2 116 2L 10843819 10843840 GTTCACCAACAATGATCTTCTC 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific Drosophila melanogaster 61 CG6144 FBgn0032259 FBtr0100565 3 1 1 183 2L 10488974 10489055 TTTGAAGTGCGAAAGTGCC 59 10489202 10489220 TCTCCTCGGCAATCATTCC 59 NA Nonspecific Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 1 1 1 60 2L 10191184 10191256 GTTGAGGAACGAATGCCAC 59 10191142 10191163 CAGCTGATTTCTTCACTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13137 FBgn0032188 FBtr0301684 1 1 1 60 2L 10173985 10174005 GGACACTTTCAGCGATATGAC 59 10174025 10174045 TGTGATATAGTTGGGCATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 hoip FBgn0015393 FBtr0079846 2 1 1 96 2L 9699930 9700016 CCAATATGACTGAGGAAGTTAATCC 59 9700069 9700088 TAGTTCAATGCTTGCTGCAG 59 NA InUTR Drosophila melanogaster 61 Pka-C1 FBgn0000273 FBtr0079852,FBtr0079851 3 2 3 135 2L 9685193 9696200 TTACATCAGCCATTTCCCTC 57 9685077 9685095 TATCTTGTTGCGGTATCCG 57 NA InUTR Drosophila melanogaster 61 CG31882 FBgn0051882 FBtr0079853 2 1 1 61 2L 9624985 9625005 CAATCAATCCACTGACTCTGC 59 9624944 9624962 GGTACTGGTTGCCTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13114 FBgn0032127 FBtr0273329 2 1 1 81 2L 9545862 9545880 GATCCGGGACAGAAATTCC 58 9545923 9546027 CGTTCGAACATCTTTCAACTG 58 NA InUTR Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 1 2 2 99 2L 9460742 9460944 AAGGTCTTGAGGCAATCCC 59 9461007 9461025 CTATCAGGCCCTTGGTCTC 59 NA Drosophila melanogaster 61 CG13108 FBgn0032100 FBtr0079773 1 1 1 80 2L 9164830 9165025 CTTTACCTCCAGTTCTGTATATTCC 59 9165062 9165081 TCCAAGCAGTTGACTTTGAC 59 NA Drosophila melanogaster 61 alien FBgn0013746 FBtr0079781,FBtr0079780 1 2 2 91 2L 8996807 8996825 CCTACATCAAGAGTGCCGT 59 8996671 8996755 CAGTGCCATATTCTTCGATGTG 59 NA Drosophila melanogaster 61 CG9541 FBgn0032083 FBtr0079785 2 1 1 80 2L 8972275 8972365 TGTTGTTGGCCGTAAATGG 59 8972213 8972232 TGCTCAGTATATCGAGGACG 58 NA Drosophila melanogaster 61 mRpL51 FBgn0032053 FBtr0079696 3 1 1 60 2L 8516806 8516828 CATCCTCTACTTGTACAAGTTCC 58 8516768 8516788 TTACTGATGTGAATAGCCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301169,FBtr0301170 3 2 2 94 2L 8319141 8319159 TAAGACCAGTTGCGATGTG 57 8318949 8319084 CAGGAACAACACTTTCTGGT 58 NA Drosophila melanogaster 61 CG7810 FBgn0032017 FBtr0079612 2 1 1 60 2L 8310724 8310743 AAACCGAAGATACCATGCCA 59 8310683 8310704 GTGTTCGCTAAAGTATTCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8683 FBgn0031985 FBtr0301229 1 1 1 80 2L 8120745 8120763 GGAAGCCATTACCTACCTG 57 8120573 8120703 GTTTGTAGTTCCATGTTCTCC 57 NA Drosophila melanogaster 61 mts FBgn0004177 FBtr0079525 1 1 1 90 2L 7828076 7828097 GATCTTGATCAATGGATTGAGC 57 7828148 7830474 GAATCTCCTTGGCCTTGTC 58 NA Drosophila melanogaster 61 CG4496 FBgn0031894 FBtr0079419 1 1 1 143 2L 7186938 7186959 GTCGAGGAGATTAGTAAAGAGG 57 7186751 7186834 GGGAATGGTCTTTCACCTG 58 NA Drosophila melanogaster 61 Ucp4C FBgn0031757 FBtr0079172 2 1 1 60 2L 5968753 5968771 CAACAAACGTCGCTGATCC 59 5968795 5968813 AAGGTGTTGACGTAGAGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 H15 FBgn0016660 FBtr0079076 2 1 1 81 2L 5414196 5415360 AGTGACTTTGATAGGGATCCC 59 5415403 5415421 GATCGGGAAAGAATCGCAG 58 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 2 2 2 87 2L 5323403 5323421 AGATGCGATTCATGCAACC 59 5323217 5323352 TTGTTGAAGCAATCAGGCG 59 NA Drosophila melanogaster 61 CG31917 FBgn0031668 FBtr0079037 1 1 1 81 2L 5010666 5010742 CTGGTGGAGTGTGATCCTG 59 5010603 5010623 GGATAATGAATTTGCGTCCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Gmd FBgn0031661 FBtr0079049 2 1 1 134 2L 4976861 4976879 AACCAAGAAGCAACGTCCT 59 4976642 4976763 AAATAGGAGCCATCCTGGC 59 NA Drosophila melanogaster 61 l(2)05714 FBgn0010607 FBtr0079050 1 1 2 80 2L 4971138 4971158 AAGATCTGCGACATCAATGTC 58 4970776 4971099 AATCATATTCTGGTGTTTCCGC 59 NA Drosophila melanogaster 61 CG42523 FBgn0260428 FBtr0300851 2 1 1 60 2L 4763454 4763472 CCAAACGATTGTCAGTCCT 57 4763493 4763514 GTCAAATGGTGCAAGTTTATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Elp3 FBgn0031604 FBtr0077439 3 1 1 122 2L 4446044 4446115 CATGCCGCTTGTTAGTTCC 60 4446199 4446219 ATTTCCTGAATGCCAACTTCG 60 NA Drosophila melanogaster 61 CG3702 FBgn0031590 FBtr0077477 2 1 1 182 2L 4226865 4226883 GAAAGCAGGCGAAGATCAG 59 4226622 4226641 AAGTAGATGATCAGGGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42465 FBgn0259955 FBtr0300301 2 1 1 84 2L 3700287 3700369 GCGGATATAAATGGCTTGGT 58 3700412 3700434 CAACATAGGAATAGAGGTCTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 GABPI FBgn0031495 FBtr0077652 1 1 1 80 2L 3030936 3031008 AGTTTGCACAAGACTTGTCAC 59 3031050 3031068 AGTCTATCCTGGAAGGCGA 59 NA Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0077623 1 1 3 155 2L 2856560 2856643 CATTACCAAGAACTTCTAAGCG 57 2856854 2856873 CCCGTAAATTCTTAGTGGCT 57 NA InUTR Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 2 2 2 155 2L 2850268 2850343 CACATGAAGGATCGAGCCA 59 2850131 2850149 GTGATCCTGTCCCATCTGG 59 NA Drosophila melanogaster 61 Pgk FBgn0250906 FBtr0077739 1 1 1 92 2L 2748356 2748376 CTTCAATAAGCTGAGCATCGA 58 2748220 2748238 ATCTTGCCCTCCTTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 1 4 4 80 2L 2738720 2738740 CAACAACTGGTACAAATTGCG 59 2738780 2738885 ACCGTCGAGAAGATGATATGG 59 NA Drosophila melanogaster 61 Cyp309a2 FBgn0041337 FBtr0077748 3 1 1 82 2L 2571701 2571719 ATGGCATCGGAGAAGAGTC 59 2565555 2571659 AGTCGAAGGGATTCATAGATCAC 59 NA Drosophila melanogaster 61 Cyp309a1 FBgn0031432 FBtr0077749 1 1 1 80 2L 2564213 2564233 AAGCTGGTCGAGTATATCGAG 59 2564102 2564175 CGTAAATCGATAGGCAAGATCTC 59 NA Drosophila melanogaster 61 CG34447 FBgn0085476 FBtr0112751 2 1 1 104 2L 2419492 2419562 GCTGTACTCGAATTCCACC 58 2419406 2419427 CCATGGATGAGTATCTTTAGGG 57 NA Drosophila melanogaster 61 CG17242 FBgn0250841 FBtr0077803 3 1 1 60 2L 2268936 2268956 CAGCGAAGATATCATCCTGAC 58 2268896 2268915 GATGAATTCCAATCTGGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15353 FBgn0040718 FBtr0077863 1 1 1 103 2L 2007043 2007142 TGAAGCTGGTACTCCTCCT 59 2006958 2006976 GTAGACAAACTGTGGCACC 58 NA Nonspecific Drosophila melanogaster 61 CG33923 FBgn0053923 FBtr0091927 1 1 1 80 2L 1341635 1341654 ATTGCCCGTTACCTTTACAG 58 1341506 1341593 CACAATGATATCGTGGTCGT 58 NA Drosophila melanogaster 61 Ag5r2 FBgn0020508 FBtr0073938 3 1 1 145 X 14677275 14677535 GGATATAACGGACCTGCCA 59 14677148 14677167 CCGATCATATTGGTGGTAGC 58 NA Drosophila melanogaster 61 CG18155 FBgn0029945 FBtr0071051 3 1 1 103 X 7223263 7223364 TACATAAGGATGGCTTCATCGA 59 7223428 7223446 ATCCGGATAGAGCATAGCC 58 NA Drosophila melanogaster 61 CG5941 FBgn0029833 FBtr0070867 1 1 1 60 X 5932588 5932916 ACACAGGAAATTCTGGCGA 59 5932940 5932958 CGTTGAGGAAGTGGTACGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 brn FBgn0000221 FBtr0070638 3 1 1 60 X 3999004 3999022 CGATCAGTTCAATCGCAGC 59 3999046 3999064 GGCCGAAACATAGTAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31002 FBgn0051002 FBtr0085813 1 1 1 96 3R 27220669 27220752 CTTTAATGAGGTCCTTAGGATTGC 59 27220596 27220619 CACTGTCTTCGTAAGATTAAGGAC 59 NA Drosophila melanogaster 61 CG4980 FBgn0039558 FBtr0085269 1 1 1 150 3R 23747949 23747967 TGCCCTACATAGATCACGG 58 23747750 23747768 ATCAGCGGAGTCTCAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Dhap-at FBgn0040212 FBtr0084897 2 1 1 81 3R 21314290 21314310 CATCCTGATGTCCTACATCTG 57 21313977 21314248 GAACATGGAGTGGAAATCCA 57 NA Drosophila melanogaster 61 CG5213 FBgn0038345 FBtr0083148 2 1 1 60 3R 11321189 11321208 GGACAAGCGTAAATCTTCCC 59 11321229 11321249 ATGATGATCGTTCGTCCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32444 FBgn0043783 FBtr0078424 3 1 1 105 3L 21630405 21631260 ATATCCAGGACAAATTCCAGCT 59 21631323 21631344 GATACGTGCCGAAATATCACTC 59 NA Drosophila melanogaster 61 CG7597 FBgn0037093 FBtr0078357,FBtr0078358 2 2 2 110 3L 21513428 21513511 CTTACGGACAGGTTTACAAGG 58 21513583 21513601 CACGAACAGCTGTAATGGG 58 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074944 1 1 3 198 3L 19594913 19594931 ACAGCGTTGATGGAATCGA 59 19595158 19595771 TCTGGTATGGCGAAACTCG 59 NA Drosophila melanogaster 61 CG32276 FBgn0047135 FBtr0073107,FBtr0073106 3 2 2 61 3L 3198770 3198789 AATATGTGACAATGCGTGGC 59 3198408 3198427 CGGATATTGACCCTCTTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG7970 FBgn0035252 FBtr0072762 1 1 1 90 3L 1653241 1653321 AAATCCATTACGGCATGCG 59 1653375 1653393 ATACGCTCTGCTGGTTGAG 59 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835 3 1 2 80 3L 897526 897616 ATACAATGATCCTGGCTACCT 59 897656 897676 GGATACTTAAGTAGAGCAGCC 58 NA Drosophila melanogaster 61 CG30393 FBgn0050393 FBtr0071620 2 1 1 60 2R 17154101 17154121 CAACGAAAGGGAACTGAAGAG 59 17154061 17154082 TATTATAGACCTCTCACTGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33845 FBgn0053845 FBtr0091849 1 1 1 60 2L 21505254 21505272 CGCTCAGGACTTTAAGACG 58 21505296 21505314 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 1 2 2 83 2L 19959684 19959762 CATCTTCGTGTACGATGAGC 58 19959808 19959826 ATTTCCAGGTCGATGATGC 58 NA Drosophila melanogaster 61 CG10189 FBgn0032793 FBtr0081284 1 1 1 60 2L 19492032 19492050 AAAGGCTCACGTTATGGGA 59 19491990 19492012 CTGATGTAAGGTTCTGTAAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15170 FBgn0032733 FBtr0081184 1 1 1 80 2L 18990205 18990223 GTGGACTGCAGACAAATCG 59 18990076 18990162 AACAACGGTCTGATCTCAGG 59 NA Drosophila melanogaster 61 nimC4 FBgn0260011 FBtr0080592 3 1 1 60 2L 14048583 14048601 ATGAGCTGAATCCCTGGAC 59 14048623 14048643 AGAACAAACAGGAATCCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34159 FBgn0085188 FBtr0112350 1 1 1 126 2L 10203021 10203392 TGGATCAAGGTCTACGAACAG 59 10202915 10202933 CATGGATGTTCTGCACCAG 58 NA Drosophila melanogaster 61 okr FBgn0002989 FBtr0077673 3 1 1 101 2L 2991053 2991132 AAACCAAAGGATCTCAATCCAG 58 2990973 2990992 AATGAGAACCACCTTGTCGT 59 NA Drosophila melanogaster 61 ninaA FBgn0002936 FBtr0078023 1 1 1 127 2L 877851 877870 ACCATCTATGCCATTGAGGA 58 878058 878076 AGGATGTTGAAGTCGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11912 FBgn0031248 FBtr0078099 1 1 1 60 2L 318791 318809 TTTCCGCAGTAAGTCTTCC 57 318749 318768 CCGTACAGATATCCATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His-Psi:CR31614 FBgn0051614 FBtr0085895 1 1 1 60 2L 21543362 21543380 TCTTTCAAACTGTCGGCCT 59 21543402 21543422 AAACCTTAGACTTTGCCTTCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31275 FBgn0063261 FBtr0083346,FBtr0083345 2 2 2 60 3R 12576907 12576926 ACTATTGGGTATGTGGTGTC 57 12576866 12576884 TATCGAAGGATGTTTCGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tum FBgn0086356 FBtr0087641 2 1 1 80 2R 9744967 9744985 CTGATGAGGAACCACACCT 59 9744836 9744924 AAACCGTATGCGTTTCTGAC 59 NA Drosophila melanogaster 61 CG30075 FBgn0050075 FBtr0087555 2 1 1 60 2R 10263564 10263582 ACGATAAGTTCTCGACCCA 58 10263606 10263624 GAGCTTAGTGATTGGTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080529 3 1 2 85 2L 13708887 13708960 GGATTGAAGGTTTACGACTGG 59 13709007 13709025 AACTCATACATGGTGGCCT 58 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0114545,FBtr0084660 1 2 3 81 3R 20476241 20476261 CACCAACTATGTGTTCGTCTG 59 20476304 20476382 CTGGGATATGGTAGCCTGG 59 NA Drosophila melanogaster 61 CG18858 FBgn0042175 FBtr0081364 3 1 1 81 2L 20457512 20457530 CTTCGATCCACCGAATGTG 58 20457384 20457470 CGATTTCTTGTACTGCAGTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG17570 FBgn0260000 FBtr0081375 2 1 1 64 2L 20264224 20264242 AAGGACGAGGGCAATATCC 59 20264178 20264196 AAGTTCGCACTGATTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 noi FBgn0014366 FBtr0078751 1 1 1 60 3R 1416671 1416689 CATGAGTGCCCTAGTGGAG 59 1416629 1416647 GTTGAGGTCCAGATAGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5194 FBgn0035955 FBtr0076548 1 1 1 88 3L 9002149 9002169 ACCAGGATTCTGACAAGAAGG 59 9002031 9002049 ATACACCACCTTCTCCACG 59 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi28S-1135a FBgn0083012 FBtr0113575 3 1 1 67 X 17040730 17040748 TCATGGGTAGAATGGGCAC 59 17040681 17040705 CTTTGATATCTTCAAGCACTAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:M FBgn0044508 FBtr0070292 2 1 1 70 X 1376593 1376611 TCAACTTCACTGCTGACCA 59 1376541 1376562 GGTGTATCTATCAGAGACTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp18a FBgn0030985 FBtr0074701 2 1 1 148 X 19029759 19029834 ATAACTATGTGGCAATCAGCTG 59 19029632 19029650 ATCAGACACCGGCTATAGC 59 NA Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074568 1 1 2 109 X 18330828 18334234 CAGGAGCAGTTGCAAACTC 59 18330737 18330755 ACCTTCAGCTTACCATCGG 59 NA Nonspecific Drosophila melanogaster 61 TwdlX FBgn0052571 FBtr0074325 3 1 1 145 X 16626029 16626155 CATTCAGGCCAACTATGATGC 59 16626262 16626280 CCACAATGTTCACGCTACC 59 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 3 4 4 81 X 16602455 16602473 TTCTGCCCACAATGAATCC 58 16602516 16602595 CGGGCATTATATCTTCCTTGG 58 NA Drosophila melanogaster 61 mbt FBgn0025743 FBtr0074285 2 1 1 125 X 16506615 16506633 GGTGATGGAGTACCTCGAG 59 16506722 16507572 CCCTGTGAGTGCAAATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12698 FBgn0030721 FBtr0074139 1 1 1 80 X 15901264 15901335 CGAAGAACAGATTGTAAATGCC 58 15901375 15901394 AAGTCTTCGGTGTAGATCGT 58 NA Drosophila melanogaster 61 CG9220 FBgn0030662 FBtr0074064 2 1 1 81 X 15483710 15483728 CTACATGTTGCCCAGTGTG 58 15481546 15483670 CGGACTGATTCCTAATATGTTGTG 59 NA Drosophila melanogaster 61 CG9203 FBgn0030646 FBtr0074074 1 1 1 81 X 15369305 15369323 TCTGAACCTGCAGAACCAG 59 15369180 15369262 CTGATAGTCCCTGTCATTGCT 59 NA Drosophila melanogaster 61 CG2540 FBgn0030411 FBtr0073675 1 1 1 60 X 12524447 12524465 CCATCTGGATTACCGGGAG 59 12524488 12524507 ATACTCGTGGAACTCCAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18130 FBgn0030359 FBtr0299570,FBtr0073581 1 2 2 97 X 11885076 11885096 CTATGGATTCTTCTCAAGCGC 59 11884928 11885017 TCTTGTCGCCAGATGAGTG 59 NA Drosophila melanogaster 61 CG11752 FBgn0030292 FBtr0073452 3 1 1 60 X 11244369 11244389 GAATACTACAGCTTCAATCGC 57 11244411 11244429 GGTACTTGGCCATTTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rtv FBgn0261277 FBtr0073470 1 1 1 88 X 11047386 11047660 TTCAATCGATGGCCTTCTG 57 11047316 11047334 TTGCATTGAAGGTGAAGGG 58 NA Nonspecific Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 3 1 1 66 X 10222041 10222059 GAATGCTGCTGGTAGTCTC 58 10222086 10222446 TTCATCCAGAATTCATTACCCG 58 NA DesignNoJunction Drosophila melanogaster 61 dpr14 FBgn0029974 FBtr0071134 1 1 1 80 X 7800331 7800350 CTCCTCCTATATCACCTGGC 58 7800203 7800289 TCCGTCTTGACACTGATTCC 59 NA Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 1 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091672 1 1 3 86 X 6766877 6766895 GAACAACCATAGTGGTGGC 58 6766945 6771955 GCTAGTGACATGTGGTTGG 58 NA Nonspecific Drosophila melanogaster 61 CG14434 FBgn0029915 FBtr0071040 3 1 1 60 X 6746234 6746253 GGACGAGGTAAAGGATCTGG 59 6746193 6746211 TTGATCCTCTGTCAGGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4095 FBgn0029890 FBtr0070955 3 1 1 300 X 6576445 6576546 ACACCAACGAGGTGATCAG 59 6576808 6576828 GTATAACCGCTGAATTCCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 Mcm6 FBgn0025815 FBtr0070952 3 1 1 60 X 6568776 6568795 ATCTATCCGTTCCTTTGCCA 59 6568818 6568836 TCTTCAGTCCAATCCGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbcn-3A FBgn0023458 FBtr0070939 2 1 1 80 X 6137238 6137258 TCTTTGTCAAGAACATGGAGC 58 6137120 6137196 GAGATTGACCCTCATCCGT 58 NA Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869,FBtr0070870 1 2 2 85 X 5954539 5954617 GTGAGGGACTTACCAGAGG 58 5954666 5954684 TTGAAGGAACTCTCCGAGG 58 NA Drosophila melanogaster 61 CG6041 FBgn0029826 FBtr0070861 2 1 1 93 X 5843234 5843253 AGAAGAGCTATGGATCTGGT 57 5843309 5843392 TTGTCGGTGATGTAACAGC 58 NA Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070841 2 1 2 137 X 5640825 5640843 ATTGCGAGTATTGGGTGGA 59 5637847 5637867 ACCAGGAAGAGTATGATTGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15912 FBgn0029712 FBtr0070677 3 1 1 60 X 4443601 4443621 CATTCTGACTTCCTACGAAGC 58 4443642 4443661 CGGAATTTCGAAGATACCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rala FBgn0015286 FBtr0070584,FBtr0070583,FBtr0070582 2 3 3 69 X 3603910 3603928 TTTCCTTTGCGTCTTCTCC 58 3602942 3603880 GATTTGTTCTCTGAATTCCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG32792 FBgn0052792 FBtr0290004,FBtr0290005 2 2 2 81 X 3464350 3464368 TGACCGATGAAGGTCTGTG 59 3464413 3464716 CGATGCGAATAGGGAACTC 58 NA DesignNoJunction Drosophila melanogaster 61 Tsp3A FBgn0040334 FBtr0070445 2 1 1 88 X 2512906 2512924 TAATTCGGGCTACCAGGAC 58 2512729 2512747 AACAACTGTATGGCACTCC 57 NA DesignNoJunction Drosophila melanogaster 61 Rbcn-3B FBgn0023510 FBtr0070316 3 1 1 194 X 1803425 1803444 ATCCATAGCGGAGGAATCAC 59 1804791 1804809 ACCAGATTGGTACTCACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR41606 FBgn0085816 FBtr0114274 2 1 1 64 U 4100839 4100857 GCTGTTCTACCGACAGAGG 59 4100885 4100903 ATATGAGAGGTCGGCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42441 FBgn0259872 FBtr0300168 1 1 1 60 U 9700434 9700453 AATAGGAAGAACACCCTGCC 59 9700476 9700494 TCTTCACCGTTGACTAGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42433 FBgn0259864 FBtr0300161 1 1 1 64 U 8681659 8681677 CGACATGATTCACGCATGG 59 8681613 8681631 CGATTCAAAGCCTCCTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40635 FBgn0085506 FBtr0302344 3 1 1 66 U 9363984 9364003 GTTGGATCAGTTCGTTCCTC 58 9363937 9363955 ATGTAGTCGATAGGCACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41497 FBgn0085658 FBtr0114103 1 1 1 60 U 1683850 1683869 GCCTCTCGATAGAATGTGTC 58 1683809 1683827 CGTAAGCTCCTCTTTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31485:Psi FBgn0051485 FBtr0081662 1 1 1 60 3R 2645031 2645050 CTTAGTTGGTAAAGCGTTGG 57 2644990 2645009 TCTGAGCATGAACTTGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2187 FBgn0017448 FBtr0085861 3 1 1 80 3R 27582937 27583039 TGTTATGAGTACCTCGAGATGAG 59 27582879 27582898 CAGGAACGAATTTGTCACGA 58 NA Drosophila melanogaster 61 CG15550 FBgn0039811 FBtr0085751 1 1 1 60 3R 26762705 26762723 CACTGGAATCCATACCCAC 57 26762663 26762683 ATACAAGTGATCAGGACTACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089926 3 1 2 136 3R 25684606 25684624 TCTGAGAAACCAAGACGCA 59 25684364 25684507 ATTAGCGTCCATTGTCATCG 58 NA InUTR Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085468 2 1 2 98 3R 25464821 25465962 TCCAAATCGCAGAGATTCG 58 25464741 25464759 TATGTAGGTCTGCTCGCAG 59 NA Drosophila melanogaster 61 Or98a FBgn0039551 FBtr0085226 2 1 1 80 3R 23672839 23672920 AATATTAAGGTGGCTAAGCTGG 58 23672958 23672979 GTTCTTTGTCAATCTGTCAGCT 59 NA Drosophila melanogaster 61 CG13663 FBgn0039291 FBtr0084873 3 1 1 80 3R 21040764 21040784 ACAAACTACGGAGATTCTGGA 58 21040642 21040726 ACTTAGTAGGTACCTGTTGTACC 59 NA Drosophila melanogaster 61 CG18410 FBgn0039226 FBtr0084741 3 1 1 104 3R 20625163 20625181 CGTTAGAGACGTTGAAGCT 57 20625021 20625095 CCTTGGTCATTGTCAGGAC 58 NA Drosophila melanogaster 61 unk FBgn0004395 FBtr0084403,FBtr0084402 1 2 2 102 3R 18981603 18981621 CCGGAGATCTACAAGTCGA 58 18980678 18981537 CCATTGAGCAAGGTTCCAC 59 NA Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 2 2 2 161 3R 18955121 18958731 CAAGTCAGATTCGTCGATCAG 59 18954980 18954998 ATCACTTCGCTGTAGACGG 59 NA Drosophila melanogaster 61 CG4771 FBgn0039018 FBtr0084323 3 1 1 80 3R 18569510 18569593 GATACAAAGAGGACTGTCTTCC 58 18569451 18569472 TGAATGTGTTGTCCATTACCAC 59 NA Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267 3 1 2 149 3R 18552814 18554575 CAAGCAGAGTATGTTGAACGG 59 18554686 18554704 AAGTAAATGCTACGCCGGT 59 NA InUTR Drosophila melanogaster 61 CG13850 FBgn0038961 FBtr0084231 1 1 1 81 3R 18235486 18235504 GAATGTGGAGAAGTCTGCC 58 18235360 18235443 TTCCAAGATATCCAAATCCCG 57 NA Drosophila melanogaster 61 CG17272 FBgn0038830 FBtr0083992 2 1 1 99 3R 16649577 16649664 CATTGATGAGTTCCGTGAGTG 59 16649435 16649453 CGAAAGACCCAAAGAACGC 59 NA Drosophila melanogaster 61 endoA FBgn0038659 FBtr0083699,FBtr0083698 1 2 2 60 3R 14733444 14733464 CAAGGAGGTAATGCATCATCG 59 14733485 14733504 CTTGCAGTCAAAGTCTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17801 FBgn0038550 FBtr0083525 2 1 1 83 3R 13632725 13632743 TTCTGTCACCTGAATCCCA 58 13632603 13632683 CTGTTCTAACCATATTCCAGTGAG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083209,FBtr0083205,FBtr0083210,FBtr0301655,FBtr0083204 3 8 8 81 3R 11780336 11780357 CTTTGGATCCTTCTTGTCATCG 59 11780394 11780480 GTCGAGAATGGTATTATCCTTGAC 59 NA Drosophila melanogaster 61 CG6196 FBgn0038323 FBtr0083116 3 1 1 135 3R 11176499 11176586 GGATAGCAATAAGGAGCACG 58 11176383 11176407 GGTGCATATAAACTTCATAGTCTCC 59 NA Drosophila melanogaster 61 CG3984 FBgn0038291 FBtr0083025 3 1 1 90 3R 10964312 10964330 CAGATGGTGACCATCCCTC 59 10964383 10964471 TGCAGTCGTAGAAGTTCTGG 59 NA Nonspecific Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 3 3 3 119 3R 10616867 10616885 TACAGTAGTGCCTCGACTG 58 10616968 10619176 AGTGGCTTGTATCTTGCCA 59 NA Drosophila melanogaster 61 CG12207 FBgn0038220 FBtr0082922,FBtr0082921,FBtr0082923 3 3 3 86 3R 10126663 10126683 GAAATGCATGAACGACTTCCT 59 10126731 10126958 CTGACCAGGTCCTTAGAGC 59 NA Drosophila melanogaster 61 140up FBgn0010340 FBtr0082909 1 1 1 80 3R 9950953 9951034 TACAATCGACGAGTTTGGC 58 9950891 9950911 GCTCCAATAAGGAATCCTAGG 57 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373,FBtr0082887,FBtr0273374,FBtr0082886,FBtr0082885 1 5 5 92 3R 9906623 9906731 CACAATGCAAGAGATGGTCTC 59 9906785 9906803 GTTCAGGGAGTCCGATGAG 59 NA Drosophila melanogaster 61 Osi22 FBgn0038133 FBtr0082738 1 1 1 110 3R 9117099 9117178 ATAGTGAAGAAGGTCGCGG 59 9117252 9117270 GCTTGGTGACCAGAAATGG 59 NA Drosophila melanogaster 61 CG11608 FBgn0038069 FBtr0082647 1 1 1 81 3R 8465146 8465227 TGAACAGGACCCTCATTCC 59 8465272 8465290 AGCTGGAAGAAGTGTCTCG 59 NA Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0100410,FBtr0082607 2 2 2 60 3R 8193868 8193887 AGTTCCTGAACACCTTCCTG 59 8193827 8193845 GCTACGGTAAGGGAGTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082527,FBtr0301023,FBtr0082528,FBtr0300622,FBtr0082526,FBtr0113391 3 6 6 80 3R 7626255 7626328 CTTTGCTTTGATTGGACTTGTG 59 7626196 7626216 CTCATGAAGAGGACATATCGC 58 NA Drosophila melanogaster 61 CG6834 FBgn0037935 FBtr0082438 1 1 1 83 3R 7511672 7511744 CAACTGAAAGATCACACTTCCA 59 7511610 7511628 AACGTCCGTAAAGTTGTCG 58 NA Drosophila melanogaster 61 Ho FBgn0037933 FBtr0082424 1 1 1 97 3R 7506225 7506243 GACAAAGACGACTTGGAGG 58 7506302 7506377 AAGACAGAGATCTTCTCAGGA 57 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082454,FBtr0082452 3 4 6 69 3R 7417028 7418105 CAGTGGCTCGAGATCAGAG 59 7416977 7416995 GGAATACTCGTTGGCTACG 58 NA DesignNoJunction Drosophila melanogaster 61 Adk3 FBgn0042094 FBtr0082331 3 1 2 82 3R 6714837 6714855 CGAACGAGAATTGCTACCG 59 6714051 6714791 CAACCTCTCCTTGAGACGG 59 NA InUTR Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 2 5 5 230 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847652 4847670 CGATGGGATTCTCGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 pch2 FBgn0051453 FBtr0081898 2 1 1 200 3R 4387267 4387342 GTAACGATCTTCGCTCTAATGC 59 4387088 4387106 GAAATTTGGTCTCGGCGAC 59 NA Drosophila melanogaster 61 CG10098 FBgn0037472 FBtr0081563 1 1 1 109 3R 2950777 2951151 ATAGTGCGCTTGACTTTGG 58 2951222 2951242 GCGATGAAGTTTAGTTTGGAG 57 NA Drosophila melanogaster 61 Edg84A FBgn0000552 FBtr0081688 2 1 1 80 3R 2510223 2510304 TCAGCATGTTGGTTAAGACTG 58 2510346 2510364 CAGATGATTTCGCTGGCAG 59 NA InUTR Drosophila melanogaster 61 CG31546 FBgn0051546 FBtr0078737 2 1 1 61 3R 1460884 1460902 ATCTGACCAAGTTGCTGCT 59 1460841 1460859 GGACACGTTGACAATGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31549 FBgn0051549 FBtr0078707 3 1 1 63 3R 1458450 1458468 GATGAACACCAATGTGCGT 59 1458494 1458513 CTTGACTAGCTCTGGAGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31551 FBgn0051551 FBtr0078706 2 1 1 60 3R 1456842 1456862 ATGAAGAATCAGAGCAGGGAG 59 1456883 1456902 GTAGAGTGTGAACTTGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-110 FBgn0083057 FBtr0113600 2 1 1 60 3L 831923 831942 AAATCGTGATCACTGAACCA 57 831882 831900 CAAATCAGTGAAGTGTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 DNApol-eta FBgn0037141 FBtr0078489 3 1 1 114 3L 21933973 21933991 CAAATTCGGTGAGGTGGTG 59 21933819 21933897 TAGCCAGGTTCCATTCTTCTC 59 NA Drosophila melanogaster 61 CG11247 FBgn0037120 FBtr0113184,FBtr0078459,FBtr0078458 1 3 3 119 3L 21719350 21719368 ATCATTCGCCCTCAAGGAG 59 21719037 21719267 ATGTGCTGTTGCAGTTGAC 59 NA Drosophila melanogaster 61 ppl FBgn0027945 FBtr0078412 2 1 1 90 3L 21273885 21273964 TTGCTATGAGAAGGGCTGG 59 21273813 21273833 GAAGGCTTTGTACTGATCCTC 58 NA Drosophila melanogaster 61 CG33285 FBgn0053285 FBtr0078325 3 1 1 60 3L 21081672 21081691 TCCAAATAGATCAACTGCGA 57 21081631 21081651 TCCATTAGAGACATGGGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(z)12 FBgn0020887 FBtr0074917,FBtr0074916 2 2 2 80 3L 19915111 19915131 ACTGTACAAGCTGCTATTTCG 58 19914989 19915069 TTGTTCGGTGGAGTTTCTG 58 NA Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 2 1 1 266 3L 19909949 19909967 CACCTACACGAGGTTCCTG 59 19910196 19910284 TCCTTATCCTTGCCCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32214 FBgn0052214 FBtr0273411 1 1 1 88 3L 19460504 19460581 TCAAATACGCTGTCGTCGT 59 19460633 19460651 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0075029 2 1 4 267 3L 19139797 19139821 GGATCTAGATTTCTTATCGAAGGAG 58 19139364 19139382 ACCTTCAGTCGATTGTGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir75b FBgn0261402 FBtr0302293 2 1 1 80 3L 17811380 17811466 CGAACTCATCAAACTAAGTGAG 57 17811321 17811339 TTTGTCTCCATCCAAGACC 57 NA Drosophila melanogaster 61 CG6333 FBgn0036731 FBtr0075224 3 1 2 165 3L 17474056 17474591 ACAGCAATAGGTGAAACAACG 59 17473911 17473929 TTTCATTCGGCAAACCAGG 59 NA InUTR Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 1 2 2 97 3L 17393990 17394008 TCGTGTTATCAGGACGACC 59 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Pgm FBgn0003076 FBtr0075492 1 1 1 124 3L 16119537 16119555 AGATCCTGTCGACAAGTCG 59 16119365 16119449 CAATGTACAAGCGAACGGT 58 NA Drosophila melanogaster 61 CG13454 FBgn0036503 FBtr0075603 1 1 1 60 3L 15510070 15510091 CGAGGATATGTTCAAGGAAGTG 59 15510031 15510049 CTCGTTTCCAGGATCCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18649 FBgn0036469 FBtr0075663 2 1 1 60 3L 15047126 15047145 CAAATCCGGTGGACATTGAC 59 15047085 15047105 TCATCAGCAATTCGTTTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ara FBgn0015904 FBtr0300551,FBtr0075908 1 2 2 117 3L 12587516 12587534 AGAATCGCACAGATGACGA 59 12587615 12587695 TTGGTCTCATCTTTGGCCA 59 NA Drosophila melanogaster 61 mRpL2 FBgn0036135 FBtr0076211 2 1 1 84 3L 11114490 11114665 TATTCCTAGGATTCCGGTGC 59 11114712 11114730 CAGACAGTGAATGCGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 dpr6 FBgn0040823 FBtr0076353 3 1 1 177 3L 9997190 10026289 TTGTGATGAGCGACATGAC 58 10026430 10026448 GTCGAGGGATCGAAGTAGG 59 NA Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935,FBtr0076370 1 2 2 83 3L 9828967 9828985 AAACGCCGTACAACTACAC 58 9828523 9828920 CTATGCGGAGTTTCTCCAC 58 NA Drosophila melanogaster 61 SH3PX1 FBgn0040475 FBtr0076413 3 1 1 129 3L 9705244 9706042 CAACATATCCGTGTCACGT 58 9705133 9705151 GAATTGCTCCTCATAGCGG 58 NA Drosophila melanogaster 61 CG5194 FBgn0035955 FBtr0076548 3 1 1 90 3L 9002149 9002169 ACCAGGATTCTGACAAGAAGG 59 9002029 9002048 ACATACACCACCTTCTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 2 2 5 80 3L 8574885 8574903 AGCAAATAGGGCAATTCCC 58 8574947 8579080 GGTAGCGACACAATCACTG 58 NA Drosophila melanogaster 61 Cdc27 FBgn0012058 FBtr0076890 1 1 1 109 3L 7241762 7241780 TGATGATTCAAGAGCCCGT 59 7241524 7241611 GTCGCTCTCCACTTCTGAG 59 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 3 2 2 96 3L 6939460 6939480 AGCTAAGCAATAAGGACATCC 57 6939537 6939609 GATATTTCCTGGCTTTGCAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG4835 FBgn0035607 FBtr0077148 2 1 1 60 3L 5474204 5474225 CACCACAGAAGAGATTGTAACC 59 5474243 5474264 ATCATTTGGATCGACATCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4611 FBgn0035591 FBtr0077165 3 1 1 135 3L 5131271 5131289 CCTTTAGCTACGTCAACGA 57 5131388 5131462 TTGGTTGATGGATGTCTGG 57 NA Drosophila melanogaster 61 Ero1L FBgn0261274 FBtr0073217 1 1 1 111 3L 4171464 4172229 AGGCCGCGTTTAAATACAC 58 4172304 4172322 GCCTGATCACTTATGCTCG 58 NA Drosophila melanogaster 61 CG34265 FBgn0085294 FBtr0112460 2 1 1 102 3L 3268517 3268535 TTTCACTGCTGCTCATTGC 59 3268667 3268686 TTCAAACTGGAGAATGTGGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG2107 FBgn0035383 FBtr0072978 3 1 1 89 3L 2982109 2982131 CGAAGAAGATGGAGTCTTTAACG 59 2982179 2982259 TTGTCGAACCAACGATTCTG 58 NA Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0113127,FBtr0072886 1 2 2 80 3L 2299262 2299769 ACCTAAAGCTGAGTGACCT 57 2299813 2299831 GGCTCATCGAACAGTACAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG13924 FBgn0035286 FBtr0300120 3 1 1 60 3L 1870899 1870918 ATTGTGGCCAGCTATATTCC 57 1870938 1870959 TCTTGTAGTAAATGCTCTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0300292,FBtr0072774 3 2 2 82 3L 1756529 1756623 CAGATTGGTGAGGAGAACAC 58 1756666 1756686 TCTCCGTTATTGTTGTGAGTG 58 NA Drosophila melanogaster 61 CG13920 FBgn0025712 FBtr0072761 1 1 1 84 3L 1650838 1650919 CGCTGATTCCCTATCATAAGGT 59 1650964 1650982 ATCCAGTGCTGGTAGATGC 59 NA Drosophila melanogaster 61 CG13898 FBgn0035161 FBtr0072599 3 1 1 60 3L 803799 803820 ATCTACAGATATTCCGAGGGAC 58 803760 803781 AATCAGTGAGTTGTATGTACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 3 2 2 65 3L 258741 258760 AGGGACGTAGTTATGTTGGA 58 258847 258865 GACGATATCCGGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Eap FBgn0035063 FBtr0072374 1 1 1 60 2R 20668849 20668867 CGAAACCACAAAGGACGAC 59 20668891 20668909 GATAGACTTGACCGTGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295,FBtr0072296 1 2 2 60 2R 20362486 20362504 ATCGATGCTAGTGAATCGG 57 20362525 20362546 TTCCCAAGTTCAATCTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3494 FBgn0035008 FBtr0072295 1 1 2 115 2R 20361917 20361991 CAGTAATCCTCGACATGTATATGG 58 20362065 20362083 CATGTGGTACTTGTCCGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30419 FBgn0050419 FBtr0072275 2 1 1 80 2R 20116649 20116668 AATCTACTTCGAGAGTCGCG 59 20103095 20116609 GGATACAGCAGTATCTTGTTGG 59 NA Drosophila melanogaster 61 CG13563 FBgn0034966 FBtr0113117 2 1 1 101 2R 19943030 19943101 TACATGACCACTGGACTGC 59 19943221 19943239 GATCCCTGGATGATCCACG 59 NA Drosophila melanogaster 61 Chi FBgn0013764 FBtr0072192 1 1 2 106 2R 19921090 19921214 GACATACAGACAAGCCGAC 58 19921002 19921020 TCGTCAATGTTCGCTTGAG 58 NA Drosophila melanogaster 61 Tal FBgn0023477 FBtr0072141 3 1 1 74 2R 19827986 19828006 ATGTCGGTATTACAGGAACTC 57 19828040 19828590 GATGTTGATGGCTTCAAAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG30413 FBgn0050413 FBtr0072040 2 1 1 60 2R 19217230 19217250 TCACGATCAAATTCACCTCTG 58 19217190 19217209 CCGTATATCACCACTTGGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)06496 FBgn0010622 FBtr0071985 2 1 1 60 2R 18949651 18949669 AGCTAAAGGGCATAACGCA 59 18949609 18949628 TCCTCGATAAGTTCGCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30268 FBgn0050268 FBtr0273311 1 1 1 80 2R 18601081 18601154 ATAATTGCTGAGTTCGAGGAG 58 18601193 18601214 AATATCAAGGGACTGAGATAGC 57 NA Drosophila melanogaster 61 CG6018 FBgn0034736 FBtr0071835 1 1 1 81 2R 18437696 18437717 GTTGAGATTAGGAAGCAATGGA 58 18437756 18437842 ACCTTATGGCCAATAATCTTGG 58 NA InUTR Drosophila melanogaster 61 Oatp58Da FBgn0050277 FBtr0071779 1 1 1 80 2R 18107580 18107598 TATACCCTGGGCATAGCCT 59 18107455 18107538 TAGGAAGGTAGACATGCTCAG 58 NA Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 3 2 2 165 2R 18013848 18013869 CTCTCAGAGGTACTGAACTCAC 59 18013649 18013722 TTAAGGCTTTCTGCTCGCT 59 NA Drosophila melanogaster 61 CG30263 FBgn0050263 FBtr0273308 2 1 1 80 2R 17565290 17565310 TGAACATAGCTTAAAGCGGGA 59 17565350 17565438 TGCTCCACTCTATAATCTCCG 58 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 3 3 3 115 2R 17069256 17069349 GTAGAGGGAGTCCACATGTG 59 17069427 17069445 AATTCCTCACGGGTCTTGG 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 1 3 3 80 2R 15554183 15554201 TCGGAGAACCTTAACGTGG 59 15554061 15554139 TTTGATGTTAACGCCGTGC 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923,FBtr0086660 3 4 4 139 2R 14522382 14522400 ACGACTTCAAGCGAATTGC 59 14521777 14522279 AAGTGTGAAGTTGGCTCGT 59 NA Drosophila melanogaster 61 GstE4 FBgn0063496 FBtr0086672 3 1 1 60 2R 14291205 14291226 AGAGACCTTTCTCGATGATCAC 59 14291245 14291265 GAAATCGGCTATGGTCAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11400 FBgn0034198 FBtr0086985 3 1 1 60 2R 13022000 13022021 GGCAAATACTACCAATGATTCG 58 13022041 13022060 TTGTGTTGATGAGTTTCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175,FBtr0290032,FBtr0087173,FBtr0290031,FBtr0087176 2 5 5 81 2R 12213566 12213654 GTCAGCAGTGCTGATAACG 59 12213503 12213524 TGACCTTGTAGAACACATAGGG 59 NA Drosophila melanogaster 61 CG42524 FBgn0260429 FBtr0300853 2 1 1 82 2R 11518271 11525270 GAAATGGAAGTCGAGAAGCAC 59 11525314 11525332 GGAAGTACCTTGGTTCCCA 59 NA Drosophila melanogaster 61 Aats-asp FBgn0002069 FBtr0087784 2 1 1 80 2R 8768766 8769019 CAAATTTGCGGGAAATATCCCT 59 8769057 8769078 GATTCAATCTTGCTAGACACCG 59 NA Drosophila melanogaster 61 CG34233 FBgn0085262 FBtr0112427 2 1 1 61 2R 8170373 8170394 TTTATGACTCTGCCAACATTCG 59 8171378 8171396 CGCCATCGTAAATGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13167 FBgn0033706 FBtr0088000 1 1 1 80 2R 8145314 8145333 AATACCAAGTGCGAATGCTG 59 8145375 8145469 TGGGTATTACCACATGCTCC 59 NA Drosophila melanogaster 61 Ef1alpha48D FBgn0000556 FBtr0088035 1 1 2 95 2R 7779676 7781067 CAGCTTATTCGAGACCATAGTG 58 7781123 7781141 GACTTACCGGAATCGACGT 59 NA InUTR Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 2 1 1 83 2R 5708183 5708260 CAGCTTCTTGGTTTAGTGCC 59 5708305 5708324 GGAATAGGGTAACTTCGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088647 1 1 5 124 2R 4788929 4789843 TAGTTTGGGCCTATCCGAG 58 4789931 4789949 ATGACTCCGAGATCGTCTG 58 NA InUTR Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088873,FBtr0088874,FBtr0301231 2 3 3 80 2R 3858083 3858102 TGGCTACATATGGGAAGCAG 59 3857965 3858043 CGGAATGTAGATGACCATATGC 59 NA Drosophila melanogaster 61 CG8728 FBgn0033235 FBtr0088882 3 1 1 81 2R 3825205 3825279 CGGATTAGTAAAGGAACAATGC 57 3825145 3825165 AAATCCGAGAATTACATGGGC 58 NA Drosophila melanogaster 61 pgant3 FBgn0027558 FBtr0089061 2 1 1 80 2R 2945931 2945951 CACCACTTCGAATGTAATGCT 59 2945814 2945891 ATTTGCTGAGTATCCATGTCG 58 NA Drosophila melanogaster 61 CG15236 FBgn0033108 FBtr0086160,FBtr0086161 2 2 2 112 2R 2717457 2717477 CTTGGGATTATAAGGAGCGAC 58 2717551 2720150 TACTCAAAGGGCAAAGCCT 59 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 3 3 3 136 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554688 2554706 TGGTGTTGAGCATGTTGTC 58 NA Drosophila melanogaster 61 BubR1 FBgn0025458 FBtr0086032 3 1 1 80 2R 1857183 1857263 CTTATGAAACCGATATGTGCG 57 1857123 1857143 CAGCTTCATGTCAATAGACAC 57 NA Drosophila melanogaster 61 RpL21 FBgn0032987 FBtr0085961 1 1 1 114 2L 22247800 22247818 CTCAACTATACGACCGCGT 59 22247630 22247650 GAATAACTCCATGCTTTCGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 1 2 2 80 2L 21634541 21634559 GGCACTGTGGCTATTAAGC 59 21634603 21634737 CCAAGTAGGTCCCTTGGAG 59 NA Drosophila melanogaster 61 His2A:CG33835 FBgn0053835 FBtr0091839 1 1 1 60 2L 21488656 21488678 CTAGAATTATTCCGCGTCATCTG 59 21488697 21488716 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508,FBtr0081511,FBtr0081509,FBtr0081510 3 4 4 93 2L 21297473 21297492 CAAGAACCTTCGACAGAAGC 59 21297545 21297620 CGTGAAGATTGCAGTAAATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0301928 2 1 2 87 2L 21199948 21200215 CAAACCCACAGTTACCAATCG 59 21199881 21199900 GATCATACGCTTGGTGATGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG40463 FBgn0058463 FBtr0100162 1 1 1 60 2L 20226268 20226286 CAAAGTGTTTATGGCGGTC 57 20226310 20226328 CTGGTACGACTGGTATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173,FBtr0081304 2 2 2 101 2L 19971473 19971491 CCAGAGCCATTATCGAGGA 58 19971302 19971408 GATAGTGTTGCTGGACCTG 57 NA Drosophila melanogaster 61 CG13079 FBgn0032808 FBtr0081255 3 1 1 81 2L 19562735 19562756 TGTCCTTGATCTCTGGATACAG 59 19562798 19562877 GTATCCACGGACCCAACTC 59 NA Drosophila melanogaster 61 CG15172 FBgn0032740 FBtr0081140 2 1 1 60 2L 19023433 19023452 CACAGACACTGAATCATCCG 58 19023474 19023493 CTCGGAGTCACTATCCAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ham FBgn0045852 FBtr0081123 3 1 1 80 2L 18764904 18764922 GAGCAGGACGATATGAAGC 58 18764634 18764863 AATGGATTTCCTATCATCCTCG 57 NA Drosophila melanogaster 61 CG15143 FBgn0032647 FBtr0080993 1 1 1 80 2L 17523934 17524015 GCTTTACAGAGAATCCTCTGC 58 17523874 17523892 AGTTCCAAGGTTTCAACGC 59 NA Drosophila melanogaster 61 CG31806 FBgn0051806 FBtr0080952 1 1 1 60 2L 16985091 16985110 AATCAAAGTTGGTGCAATCG 57 16985133 16985151 ATGACGTCCTCTTCATCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cas FBgn0022213 FBtr0080930 1 1 1 92 2L 16823560 16823649 GTACGATTCGTTGGTCTCC 58 16823486 16823504 AGAATCTCTGGGTTCTCGA 57 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 111 2L 16467745 16468061 ACTATTCCGAATCCCTGGC 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 CaBP1 FBgn0025678 FBtr0080837 3 1 1 94 2L 16356564 16356582 TAAGCGGTTTCGCAAACTC 59 16356419 16356439 GAATAGAAGGCACTAACGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13258 FBgn0032582 FBtr0080853 2 1 1 85 2L 16292722 16292969 TGGGTTTCAGAATTGTGCT 57 16292655 16292673 GATCTTCACCCAATCCTGG 57 NA Drosophila melanogaster 61 CG15258 FBgn0032563 FBtr0080743 2 1 1 60 2L 15361550 15361568 GGAAGAAGTTCCCAGAGAC 57 15361508 15361526 GTTGCGGGTTATTTCACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6766 FBgn0032398 FBtr0080308 3 1 1 82 2L 12040320 12040338 GGAGAAGTACGACTGCCTG 59 12040194 12040276 TAATTGGAGACAACTCTGGCT 59 NA Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 1 3 3 151 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524488 11524574 TAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 CG14930 FBgn0032366 FBtr0080245 3 1 1 91 2L 11521179 11521198 AGTTCGTAGATGGTATGCTG 57 11521045 11521126 CCTTGCCAAAGTATAAGCCA 58 NA DesignRelaxed Drosophila melanogaster 61 dpr2 FBgn0053507 FBtr0300672,FBtr0290007 1 2 2 80 2L 10925503 10961100 CAGTCAAATCGTTGTCTCATCTC 59 10925445 10925465 CGTTATCAATGCTCGATGGTG 59 NA Drosophila melanogaster 61 CG34181 FBgn0085210 FBtr0112374 2 1 1 60 2L 9368048 9368069 TGGCTTTCAGGACTAATTACCA 60 9368090 9368108 CTTCAAGGACGTACCACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9465 FBgn0032067 FBtr0079743 2 1 1 95 2L 8770473 8770493 CAGAGGTCAAACATTCATCGA 58 8770335 8770419 CCATCACTAGTTTAACAACCGA 58 NA Drosophila melanogaster 61 CG13096 FBgn0032050 FBtr0079698 2 1 1 147 2L 8510541 8510559 TTGTCAGGACAGGCTACTG 59 8510064 8510082 TTGACAACTGCCTGAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31900 FBgn0051900 FBtr0079580 1 1 1 80 2L 8157879 8157897 CGGAAACGGTTTACTCCAC 58 8157940 8158027 GCAGGCTTAATCTGGTAGGA 59 NA Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 3 2 2 114 2L 7735203 7735335 GAACTACGACGTCGATTTCG 59 7735108 7735126 GTAGGACAGTCCATGTCCA 58 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 2 2 2 80 2L 7380575 7380593 CTACTCTCGATTGGTGGAC 57 7380637 7380723 TTTGTGTCTCCGAACACAG 58 NA Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 2 2 2 145 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312950 7312968 TTGTGGAGATCTCGACTGG 58 NA Drosophila melanogaster 61 CG13779 FBgn0040954 FBtr0079403 3 1 1 97 2L 7064134 7064152 AACAAGAGCGAAGACTTGG 58 7064267 7064286 TTTAGCTCTTCCTCGTCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8852 FBgn0031548 FBtr0089937 2 1 1 104 2L 3527133 3527153 CCATCTACGATCATCTGTCGT 59 3527274 3527297 CCAGATTCGTGTTCTCTATTTACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 2 2 2 84 2L 3473692 3473775 CAACTACAATTGGCTGCCT 58 3473821 3473841 CGAAATAGTATCCACCATGGG 58 NA Drosophila melanogaster 61 CG2774 FBgn0031534 FBtr0077517 2 1 1 87 2L 3451378 3451399 CGAATTGACCAGAGTTAAAGAC 57 3451447 3451528 ATAGCTGACGATCTGTTGC 57 NA Drosophila melanogaster 61 CG3523 FBgn0027571 FBtr0077659,FBtr0290093 1 2 2 80 2L 3067314 3067393 ATCGCCTTAAGGAGGTCTG 58 3067437 3067455 GATCCTCGATGAGGAAGGT 58 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0077678,FBtr0290241 2 2 2 137 2L 2971187 2971266 AACCAAGCCAGCTAAAGGA 59 2971006 2971024 TCGACATCGGGTTCTTCAG 59 NA Drosophila melanogaster 61 snapin FBgn0031455 FBtr0077737 1 1 1 60 2L 2759347 2759365 GTCATAAGCAACGTGTTGG 57 2759305 2759323 CTATCAGCTTGTGCAGACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dpr3 FBgn0053516 FBtr0300671 3 1 1 80 2L 2066570 2066589 GATACGGAAACGTGATCTGC 59 2065733 2066527 GATTCAGTCACCTGGAAGC 58 NA Drosophila melanogaster 61 CG4552 FBgn0031304 FBtr0077956 3 1 1 96 2L 1131097 1131116 CTACTTCGGCGATCAAATGG 59 1131175 1131275 CGCTGATTTAGTCTGCTGC 59 NA Drosophila melanogaster 61 kraken FBgn0020545 FBtr0078016 1 1 1 80 2L 852990 853195 CTTTCGCCAGAGACAAATGG 59 853238 853256 CGCGATAGAGAACTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG3639 FBgn0031282 FBtr0078010 3 1 1 63 2L 816161 816179 GACAACCTGATTTACCCGG 58 816206 816224 TAAAGTCCAGGCGTAGTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 KH1 FBgn0086130 FBtr0078009 1 1 1 106 2L 812489 812573 GATTTCCCTTCCACTTGGTG 58 812637 812660 GTCTATGACTTTGTGAAGGATCTC 59 NA Drosophila melanogaster 61 CG11835 FBgn0031264 FBtr0078076 1 1 1 60 2L 562164 562185 AAGCAATTGGATCAGAACACTC 59 562125 562144 CTGGCTTAGCTTCACTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2789 FBgn0031263 FBtr0078066 3 1 1 235 2L 559818 559837 CAACCTTAAGTTCCCGTCCT 59 560035 560112 CTATGTCAATAAGGCCGCC 58 NA DesignRelaxed Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083,FBtr0078084 1 2 2 60 2L 477917 477937 GTCTCTTCTAGTAGCCAAGAC 57 477877 477895 AAGAGGAACTACAGCAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33635 FBgn0053635 FBtr0091612 3 1 1 160 2L 158529 158550 GAAGAAACCAAGTTTCAACGTC 58 158330 158348 CCATTCCTAAACAGGCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42399 FBgn0259818 FBtr0301929 3 1 1 80 2L 145902 147359 ATCAAGTCAGTGGATACCGA 58 145841 145862 CGAATAGCTAGTAGAACTTGCG 59 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 1 2 3 80 2L 232088 232299 GCATCATACTTCTTTACTGCCT 58 232029 232047 TCGGTGTTATCAAGTCCCA 58 NA Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 2 2 2 80 2L 411178 411199 TACTCTATTCGTGAGGAAATGG 57 411051 411140 GTCCACATACCAGGTATAATCC 57 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 3 3 5 91 2L 849927 849946 GAACATGACCATCGGATCCT 59 837335 837356 CCATCGATATGGATTTCACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 3 4 4 82 2L 1695513 1695531 AATCGGAGCGAAACAATGG 58 1695575 1695657 GGCTCCGTTATCTGTAGACTC 59 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077765 2 1 2 128 2L 2376134 2377142 TGTTAACGACGTGCTTTAAGG 59 2377232 2377250 TTTCCGGATAAGCTCCACC 59 NA InUTR Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 1 4 4 139 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882381 2882399 ATTGAACTTGTAGGCCAGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 2 7 7 80 2L 2963121 2963234 CAATCTGTTAAGGTGATTCGTG 57 2963273 2963293 CTCTTCGTAATTCGTCATGGT 58 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077606 2 1 3 113 2L 3292711 3292729 GGAGAGGTCCTTTACGCTG 59 3292564 3292634 CACACTTCCAGGGATACCG 59 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 1 4 4 80 2L 3780518 3780538 CCCTATTCCTGTGATATCTGC 57 3780577 3781922 CTCCTTGGAGTGAATATACCTG 57 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 3 6 6 104 2L 4909615 4909687 CATTCTATGGGTTTCCGCT 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 2 4 11 87 2L 5004201 5004625 TACTCGATCCCAATGCCTG 59 4994955 4994973 CCGGATTTCTTCACATCGC 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 2 6 6 60 2L 5047161 5047179 CAGACGTTAAGCGACATGG 59 5047198 5047287 CTTCGTTATAGATAGCTGCATTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 3 4 5 114 2L 5277020 5277039 TCTACGAGTTATCCGTCACG 59 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 2 4 4 93 2L 5973670 5976624 GAAGACAACACAAGCCGTG 59 5973595 5973619 CAGATAATCTCCAAGTTTCTCTACC 59 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0079224 3 1 2 183 2L 6032919 6033332 GAAATGGCTGTGAGCACAC 59 6032438 6032456 ACATTGGGTATCCCAGTGC 59 NA Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 1 2 2 80 2L 6445784 6445870 GATCCGCTCAATCTACTTAATGC 59 6445726 6445746 CTGTTCCTCAACTCGTTTCAC 59 NA Drosophila melanogaster 61 CG4502 FBgn0031896 FBtr0079417,FBtr0079416 3 2 2 90 2L 7196230 7196325 GACAAGATCACAAGGTGGC 58 7196158 7196177 TATTCTTTCATCAGGCGACG 58 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 1 3 3 84 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227334 7228705 GTTTAATGGGAACCTGGCG 59 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 2 4 4 80 2L 7444381 7444468 TCATTATCGATATGGAAGGGCT 59 7444509 7444527 TGTAATCCAGCAACATGGC 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 1 4 4 84 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 2 4 4 80 2L 7649009 7649029 GTTGAGGACTTAGTCCTTTGC 59 7648881 7648972 CTTAATTGTACTGAAACAGGGACC 59 NA Drosophila melanogaster 61 Ntl FBgn0031934 FBtr0079479 1 1 2 199 2L 7711594 7711842 TTTCATCACCGCCTTTCTG 58 7712005 7712023 TGATCACCGAGTAGTAGCA 57 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493 2 1 2 83 2L 7799364 7799383 AATGTGGACTCCGATCTCTG 59 7798615 7799319 CTGGATTAACGGTTTGCCAG 59 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 2 2 3 82 2L 7986006 7986025 TAAGCTCGACTTCAAGTCGA 58 7986070 7986151 GATACGTGGTAGGGTTCGG 59 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 1 2 2 80 2L 7988311 7988400 GGTATTACCTTGTATGAGAATGTCC 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534 3 1 2 179 2L 8013092 8024523 CAGATCTTGAAGATGGCGC 59 8024664 8024684 TGTAGTCTCGATTGAAGTGGA 58 NA Drosophila melanogaster 61 CG8475 FBgn0031995 FBtr0079638,FBtr0079639 3 2 2 82 2L 8195970 8196052 CCTACAGATAGATTGCGTTTCTC 59 8195910 8195929 CGTGGGTGTAAATGATCTGC 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079625 1 1 9 82 2L 8228546 8228564 CCGACGTAGTCATACCCTG 59 8228246 8228500 TTTCCACGTGCTTTCTCCA 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 1 3 9 91 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226523 8226541 AATCCAGGGTGAAGTTGGT 58 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0079620,FBtr0079621 3 2 4 93 2L 8245213 8252237 CAGATACCAGCTCCTAATGTC 57 8245140 8245158 CCGTAATCGTATAAGCCGG 58 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 3 6 6 86 2L 8262337 8262357 CAACGGAACTCTATTGGATGC 59 8262206 8262289 AAGTGGGAGTTGTCCTTGG 59 NA Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 3 1 1 115 2L 8308546 8308564 GAGCGATGTGCTAAAGAGC 59 8308715 8308733 CTTCGGCATTACCCAAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pp2A-29B FBgn0260439 FBtr0005088,FBtr0100533 3 2 2 80 2L 8367722 8367807 GATGATCAGGACTCTGTCCG 59 8367848 8367868 CTCTACATCATCCTGAGGCAG 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 1 2 4 80 2L 8428053 8430284 GGACAGCAAATTGAGGTGG 59 8430326 8430346 TTGTTCCTGTGTTGTAACGTC 59 NA Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930,FBtr0079691,FBtr0110931 1 3 3 80 2L 8564225 8564244 TTACAGTCCTCGTGATTGGT 58 8564286 8631035 CTTCGGGACCTAATTCAACG 58 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 2 3 3 81 2L 8944285 8944303 ACCATCTGATTCCATCGCA 59 8944157 8944240 CAGTCAAGTCCCTCATCCG 59 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 3 4 5 84 2L 9535897 9536002 CTATATCGATCACTCCCGGC 59 9536049 9536067 ACCACCAGCAGAATGACTC 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 3 3 3 81 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575367 9575385 CTTCACAAAGTCGGTGTCC 58 NA Drosophila melanogaster 61 gcm2 FBgn0019809 FBtr0079838,FBtr0079837 1 2 2 80 2L 9611432 9611450 CAAGGTTCTTAAGCGTCCT 57 9611493 9611571 TTGCCACAGGCATTATACTG 58 NA Drosophila melanogaster 61 Trx-2 FBgn0040070 FBtr0079839,FBtr0079840 3 2 2 100 2L 9613531 9615312 GAAAGATAAGGCCGATCTCGA 59 9615374 9615392 AGATCATCTTGCAGGGTCC 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 4 7 81 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 3 5 6 101 2L 10399596 10399614 AAATGCATCAGGGAAAGCA 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG31869 FBgn0051869 FBtr0290245,FBtr0290246,FBtr0080189 2 3 3 117 2L 10774659 10774752 CGACAATTGTCCAATTCTCGA 59 10774562 10774580 GTTCCAGTTGAATCCAGCC 58 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0080196 2 1 2 94 2L 11092643 11092662 GACCCTATTTGTTCCTTCGT 57 11092716 11092792 GTGACCAGTTCTATTTCATTGG 57 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 2 4 4 122 2L 12385730 12389197 GAGCTATAAAGGCCCTCCA 58 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 1 5 5 80 2L 14984074 14984206 AGTCATATTAATCACTCGCCTG 58 14984015 14984034 CGTGAGAAGGCTTTGTATGG 59 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 1 4 5 106 2L 15730831 15737640 CGATTCAAACGAGGACCCT 59 15730743 15730761 CAACCGATGACAGATTGCC 59 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791 1 1 2 133 2L 15895800 15895878 GAAATTAACCTGGACCACTGTG 59 15895972 15895990 GAATGGCGATTGCAGACTG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 1 4 16 103 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 2 4 5 107 2L 17439291 17441812 CAATGGACTCAGATCCAGC 58 17439202 17439220 GGTCATTCTGCAATTGCTG 57 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0081051 1 1 5 86 2L 18391291 18391309 ATATTGTGGAGGGAAGCGT 58 18391358 18392077 GCCAAACTATAGCCTTTGGT 58 NA Drosophila melanogaster 61 Pde11 FBgn0085370 FBtr0112544,FBtr0112545 2 2 2 80 2L 18535125 18535201 AACTCCTTCCAGATTAAAGCC 58 18535065 18535085 CTGATCAAAGTGATGATGCTC 57 NA Drosophila melanogaster 61 CG42305 FBgn0259201 FBtr0299687,FBtr0299686 2 2 2 60 2L 18813310 18813328 CCTGTCTTCCAAGAAAGGC 58 18813351 18813370 GGAGAATTCCAGACAATTGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 3 4 4 110 2L 18827244 18827517 CACTATTAGCTTAGAGGACTTCGA 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089314,FBtr0089315,FBtr0089317,FBtr0089316 3 4 4 109 2L 18856841 18856926 GCTAAGGGAAGCCTTAACG 58 18856750 18856771 AACATATAAGGATGCTCCTTGC 58 NA Drosophila melanogaster 61 Nak FBgn0015772 FBtr0081189,FBtr0081187 1 2 3 95 2L 18965177 18965270 GATGAATGCGAGATTGCAC 57 18965100 18965120 TGACAATAGTGCAATCGAGAG 58 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081220,FBtr0081219 3 2 4 199 2L 19387760 19388048 CAACCAACATCGCATCCAG 59 19387579 19387597 TGGAACCGATAGATCCGGA 59 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 2 4 4 80 2L 19391955 19392075 TCAACTGCATCAATATCGCA 58 19391894 19391912 GTGCTTGTCAGCTCTTCAG 58 NA Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 1 2 2 182 2L 19496696 19496716 GCGAATAACAAGTCTACCCAC 59 19496859 19496969 GCCGAAGTTCTTAAAGTGCC 59 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0100351,FBtr0100352,FBtr0081325 2 3 3 89 2L 19733220 19733238 CAAACGTTTCCGAACTCCT 58 19733056 19733169 TCTAACGAGCATATCTTGCAC 58 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173 1 1 2 103 2L 19970592 19970610 CACACTCAGTGTCAAGGTC 58 19970449 19970525 GCTCAACATTATCCTGGGT 57 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 3 3 3 181 2L 20687404 20687422 GATCGATGACACCAAGCTG 58 20687058 20687259 CATGGCGTTCTGTGATCAG 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081492 3 1 5 88 2L 21188916 21193342 TGTCTTCTACTTCGCCGTC 59 21188846 21188867 AGAATATGCTCTCCGATTCCTC 59 NA Drosophila melanogaster 61 CR18854 FBgn0042174 FBtr0079919,FBtr0302441 1 2 2 80 2L 9789414 9789432 GCCTCTACTGACAGATGAC 57 9789292 9789371 ACTATTAGGCAGAGGTTTGG 57 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 3 4 4 82 2R 705345 705363 TTCTATATGCTGTCTGCGG 57 705227 705299 AACGTCAATCTTTAGCCCA 57 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 3 3 3 80 2R 1195092 1195110 ATCCGAATTCAACAGGCAG 58 1195154 1203788 CCAACTCGAGTAAACCGAC 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 2 4 4 78 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515390 2515408 GTACCAGACTTAGCAGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 2 2 2 60 2R 2555832 2555851 TACAAGGAGGAGTACGACGA 59 2555871 2555892 ATATAAAGTACTGGTGGAAGCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 1 3 3 86 2R 2752068 2752150 GTATTTCGAGGTAACGCCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 CheB42a FBgn0053348 FBtr0086168 2 1 1 85 2R 2837197 2837216 TTCGAATTGAAGGAGAGCAG 58 2837314 2837332 CAGGCGATAGACTTGACCA 59 NA DesignNoJunction Drosophila melanogaster 61 Tsp42Eb FBgn0042086 FBtr0086177,FBtr0086176 2 2 2 60 2R 2887114 2887132 GAGTTCGTCGATTTCTGGG 58 2887156 2887174 CGATGATCAGACTGCTCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 3 3 3 82 2R 2921961 2922139 TTATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111071 1 2 59 80 2R 3225051 3225069 GGGAAAGTATAGTTGCCGG 58 3219876 3225011 CTGGGAGGTACATTAACTATGAG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 2 2 59 81 2R 3225659 3235366 GTGCAAGTCATGGTTCCAC 59 3225596 3225614 TGACCGAAACAGAGTCCTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111066 1 1 59 81 2R 3219876 3225767 CTTATTGTCAATGTACCTCCCAG 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 1 7 8 102 2R 3293618 3293711 TATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 2 2 2 118 2R 3715845 3715925 CTACCAAGTGGAGTACGCC 59 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581 1 1 4 88 2R 3738545 3739778 AAAGAGGGCTGACATTAAGCT 59 3738477 3738495 AGCAGACGACATCCTTCAG 59 NA Drosophila melanogaster 61 lin19 FBgn0015509 FBtr0088845,FBtr0088847,FBtr0088848,FBtr0088846 3 4 4 85 2R 3806268 3806288 GCGGCTTTAATTCAAAGAACG 59 3806332 3806414 GATAAGAACCTCTTCGCATGTG 59 NA Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 1 2 2 84 2R 3846784 3846862 CAAGCATAGAGTGTTGACCT 57 3846719 3846737 AGAGGCATCAATGCTTTCC 58 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088874 1 1 3 80 2R 3859193 3859211 ATTGCCAATTGACGACACC 59 3859024 3859149 AGCAGGTACTCCGTATGTC 58 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 2 3 3 92 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877559 3877638 GTCCCAAATCTTGACGGTC 58 NA Drosophila melanogaster 61 Pabp2 FBgn0005648 FBtr0088786,FBtr0088785 3 2 2 182 2R 4020283 4020454 GGCGTCAAATAAAGGTAATGTC 58 4020662 4020680 AAGGAGCGTAGTAATTGGC 57 NA Drosophila melanogaster 61 rgr FBgn0033310 FBtr0301542,FBtr0088692 2 2 2 80 2R 4496830 4496850 GTGGTACTTTGAGAGGATGGA 59 4496890 4496970 TCATTGGAAATCTTGGCTTCC 59 NA Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301191 2 2 3 80 2R 4898915 4900536 GATGAGCTGGACTTGATACC 57 4898854 4898872 CAAGACACAGGAGATGGAC 57 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 2 2 2 107 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957125 4961588 GATATCGTTGAGTCGCTGAG 58 NA Drosophila melanogaster 61 CG8083 FBgn0025709 FBtr0088560,FBtr0088562 1 2 3 136 2R 4967666 4967744 CTGGATCATAAGGAGTTGGAC 58 4967842 4967860 ATCGAGATCCTCACCAGTC 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 ltd FBgn0002567 FBtr0089933 2 1 5 100 2R 5066720 5073629 AGATCCAAAGCCATCATGAC 58 5066639 5066658 TTAATGAAGGACGTCTTGCC 58 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0088606 3 2 4 176 2R 5118142 5119261 ATTTCAGTGAATGTGGGATGG 58 5117986 5118004 GTCCTCCGAGTAGTTGGTC 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 1 3 10 80 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595 3 1 2 80 2R 5175397 5175476 GCGATAAGCAGGATATTTCCG 59 5175513 5175536 GAACCTTTAGAGGATGACAAACTC 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0301766 3 1 5 131 2R 5360663 5360753 TCTCTGAGGATAGCCACAC 58 5360847 5360866 TGTTATCACTGGAAGCACTG 58 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 1 10 10 114 2R 5738883 5738970 GAAGCCGTTAAGGAGATCCA 59 5738788 5738806 CTTTGTCGCCAACCTTCAC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993534 5993553 TCTGGCCCTTAACTTCTCAG 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993882 5993901 TCTGGCCCTTAACTTCTCAG 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088422,FBtr0088420 1 2 3 80 2R 6000610 6000630 CATCTCCAGTACAGCCTACTC 59 6000671 6001062 ACAAGAGCTAAATAGCCGCA 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 2 16 17 81 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193032 6193050 AAGTTGTATTTGGCACGGG 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 1 4 17 106 2R 6181259 6181376 TGAGATCGGAGGTCAAGGA 59 6181661 6181680 ACACTTGTAGCGAATCACGA 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089342,FBtr0089349 1 2 26 115 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6408770 6419549 TCGTACTTCAGGTCTTGGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 2 2 26 95 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6393563 6419548 CGCGTAATACTCAGATCTTGG 58 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 2 3 3 91 2R 6527407 6527427 CAATCATACAAGTTGTGCGTC 58 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 2 3 3 60 2R 6771530 6771619 TACAAGGATCGTACCATAACGG 59 6771639 6771658 CTTTGAAGTTCGCCTTCTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Oda FBgn0014184 FBtr0088014 1 1 3 60 2R 8058442 8058463 CAGAAGATTCAGAACGAGAACC 59 8055683 8055703 CGAAGCCACTACTAAACACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 1 6 6 91 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335733 8335751 CTTAGTTTGTCCACCAGCT 57 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0100300,FBtr0100298,FBtr0087931,FBtr0113074,FBtr0087929,FBtr0087930 2 6 6 92 2R 8335598 8335679 TACACAAGTGATAACTCGGG 57 8335734 8335752 TCTTAGTTTGTCCACCAGC 57 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 3 6 8 101 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504670 AATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 Galpha49B FBgn0004435 FBtr0087834,FBtr0087829,FBtr0087831,FBtr0087833,FBtr0087830,FBtr0087835 2 6 8 100 2R 8504439 8504593 GCCAAATATTATCTGAAGGATCTCG 59 8504651 8504669 ATTATCCCTGTTGTGGGCA 59 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302151,FBtr0087870 2 3 6 85 2R 8548692 8552498 GACAACATCGCGCTATGAG 59 8548625 8548643 TGGACAGGATGACGATCAG 58 NA Drosophila melanogaster 61 CG42663 FBgn0261545 FBtr0302644 3 1 2 151 2R 8622484 8622504 CCACCTCCGAATTACATACAG 58 8622617 8634124 CCGCATTGGCTCTTATCAC 59 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087858 3 1 3 162 2R 8648349 8648367 AAATCGTGCTAAGCGACAG 58 8647922 8647941 GCTATCACTGCCATCATCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087787 2 1 3 95 2R 8805402 8805513 TCACAATTGATTCCCTAAACGC 59 8805568 8805587 GAAGTAACAAGTCCTGCGTG 59 NA InUTR Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 2 4 4 80 2R 9074417 9074493 TCAGTAAGATCACGCAGGA 58 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 3 2 2 80 2R 9114420 9114496 CCAAATACGTAGAAGCCTACG 58 9114537 9114556 CGTTGAACTCATTGTCCTCG 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 1 3 12 85 2R 9305328 9306504 AACCGCGATCTTCTGACTC 59 9305261 9305281 ATGATGATCGTGCGAAATCAG 59 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 2 2 3 80 2R 9406092 9406113 CCATACTCTGCTTTATGTATGC 57 9405635 9406054 AGATCAAAGACTTCTTCTCGTC 58 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 1 5 5 149 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426352 9426487 CGGCCATCTTTAAAGGTCAC 59 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 2 5 5 82 2R 9436513 9436532 TTATGGTGACTCCCATCTGC 59 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 2 9 15 137 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 1 2 2 80 2R 10057017 10057084 CCTTCTACATGATAAAGGCCC 58 10057126 10057144 TCGAAGTATGCTTGTGCTG 58 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 2 4 4 84 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125980 10125998 TGTTGCTAAACCCGAAGTC 58 NA Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 3 1 1 168 2R 10840592 10840610 CCAGCTGGATAGTCCACAG 59 10839924 10839942 ATGACTGTGACTGTGGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 scb FBgn0003328 FBtr0087369 1 1 2 101 2R 11136981 11141561 CAGACCAGCATCATTGTGG 58 11141626 11141644 GTTTGTCAGGGAGCATCTG 58 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0110832,FBtr0114579,FBtr0110831,FBtr0110833 3 4 6 80 2R 11172467 11178447 CCAATTGGGTGTTTCACCA 58 11172405 11172425 GGCATGGTATGAATTTGATGC 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112588,FBtr0112589,FBtr0112590,FBtr0112587 1 4 4 80 2R 11344303 11350806 TTGATATCGAGGAAGAAACGTC 58 11350847 11350865 TCTTGAGGAGCATCAGTGG 59 NA Drosophila melanogaster 61 CG8204 FBgn0034033 FBtr0087349 2 1 1 101 2R 11461013 11461031 CTACCAGGAGGAACCTACG 58 11460872 11460890 AAATTACGCAGTTCCTGGC 58 NA DesignNoJunction Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087343 3 5 7 80 2R 11555162 11555180 AGCTGATTCTACCCATTGC 57 11553477 11555118 GCAGATAGGCATCGAACTC 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 1 3 3 95 2R 11587254 11587278 CTTTCCTTATATCGAAAGATCTCGC 59 11587114 11587206 CTCGAGGAATCTAACATATTGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 3 3 4 86 2R 12646816 12646834 CTCTAAGACCTTGGTGGCC 59 12645899 12646767 AAACGTTGCCGTAACTTCTC 59 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087074,FBtr0087072 2 3 3 114 2R 12753591 12753668 AACGTTATGCAACGAAATGG 57 12753496 12753514 CTTGAGCGTGATTTACGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 2 3 6 132 2R 12897656 12897675 GACAAGCTGTCCTACATCGA 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 RhoGEF2 FBgn0023172 FBtr0086970,FBtr0086971,FBtr0086969 1 3 3 80 2R 12926020 12926103 TTGAGTTGACTCCAGACCG 59 12926145 12926165 TTATCGATATGTTCGCATCCG 58 NA Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 1 2 2 113 2R 13394241 13394960 GAACAAATAGACGTCCCATCAC 59 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Sema-1b FBgn0016059 FBtr0302161,FBtr0086890,FBtr0086891 3 3 3 92 2R 13563479 13563497 GGCAAGAGTTGGACTTCCT 59 13563332 13563424 ACTAATGGCCTGGATTTCGT 59 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 1 3 3 92 2R 14007593 14007612 AGCAACAGTACGAGTAACAC 58 14007460 14007539 GAAGTTGACCTCAAAGTCCA 57 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 1 2 2 101 2R 14273055 14273073 AAGAGCCTGACGTTATTGG 57 14272917 14272935 ATCATGGGAGCAGTTTACG 57 NA DesignNoJunction Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300925,FBtr0300923 3 3 4 160 2R 14520829 14520848 GAGTACGTACAGTCAACACC 58 14520624 14520707 CATAACCTGTCTGCATTTGG 57 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 3 3 4 103 2R 14522433 14523655 TTGATCAGACCAATGTGTATGC 59 14522351 14522369 CAATTCATCTTCGCTGGGT 58 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631,FBtr0086630 2 2 2 124 2R 14710833 14710852 GCATCTGTATTGCATTGGTG 57 14710665 14710746 CTTCATGGGTGGATCTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086592,FBtr0086589,FBtr0113096,FBtr0086591 3 5 5 105 2R 15023519 15023537 GATCAACGGCTACAACTGC 59 15023274 15023453 CGCTGTCTTGTTCTTAATTTGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 2 8 12 80 2R 15064179 15064197 TTAGTCACAAGCAGTGCCA 59 15064237 15064456 GAAATGACGTTAGTTCCATGGAG 59 NA Drosophila melanogaster 61 CalpA FBgn0012051 FBtr0086529,FBtr0112869 3 2 3 90 2R 15315978 15315997 TTCAACTTTCGATCCAAACG 57 15316047 15316760 CACATGATCATCATTCTCTTCC 57 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 3 6 6 125 2R 15418200 15419689 CTATTGAGGGTAAAGGCACCA 59 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 1 1 1 60 2R 15586763 15586782 CTCTAAGCGAACTAGTAGCG 57 15586660 15586679 TGAATTTGCTTGTAGGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 3 3 3 80 2R 16217662 16217743 ACCTGAAGGACTATATCAAGTG 57 16217782 16217802 AGTACTCATAGTAGCGTTCCT 57 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086285,FBtr0086284 3 2 3 97 2R 16215632 16215845 CATAACAGATCCCTCATTACCC 58 16215901 16215921 TCTTGTCCCAATAATCGTTGG 58 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495 1 1 2 80 2R 16439220 16439300 CCAAGAGCAATGAGATTATGCA 59 16439161 16439180 GATTCTGGTGGCTGTAATCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071524,FBtr0071523,FBtr0071525 2 3 3 88 2R 16891592 16891668 GCGATCAGACCTTCAAGTG 58 16891720 16891738 CTTTCCCTTCTTAGGCGGA 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 2 8 8 80 2R 17194841 17194918 GGTCTTAAAGGAGGATCAGCA 59 17194959 17194978 ATTGTATTGGAAACGCTGGG 59 NA Drosophila melanogaster 61 dve FBgn0020307 FBtr0071776 2 1 2 164 2R 18158445 18168184 GGAAGAAGCCAAATCACTTCC 59 18168310 18168328 TGAACAATCTCGCTCCAGG 59 NA Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 2 2 2 189 2R 18299366 18299384 GCGAGGAACTATTTGAGGC 58 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 1 1 1 60 2R 18547462 18547482 TCTGACCTTGTATATCTGCTG 57 18547559 18547580 GTAGTTGATGAAGTAGGGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273314 2 1 5 113 2R 18595831 18595851 GGAAACCTTCGATGATTTGGA 58 18595925 18596199 TTATCTTCGGCCCTATCCAC 59 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 2 3 3 118 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631799 18631817 AAGTCGTTCGACTACGTGG 59 NA Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299572 1 1 3 80 2R 18646902 18647279 GAGCTTTCTCGATCTAGGAC 57 18646841 18646859 GTGAAGAAACCTTGTTGCG 57 NA Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302771 1 1 13 89 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817840 18817924 TCTCTTCCAGCAACTGCTC 59 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 2 3 4 92 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958196 18958214 TCTTGGTGCTGGTGTACAG 59 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 3 3 4 103 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958207 18958225 CTCAACTTGGGTCTTGGTG 58 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072035 3 1 3 157 2R 19270278 19270625 ACAGAATGTTCGTTGCTGG 58 19270139 19270160 TTCTTGTAGAAGTACTCCTCCT 57 NA InUTR Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 2 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 CG42560 FBgn0260762 FBtr0301262,FBtr0301263 1 2 2 83 2R 19487211 19487291 TTCCTTAAACTGCAACGGG 58 19487146 19487167 GATGATCTTTGTTGTGACTTCG 58 NA Nonspecific Drosophila melanogaster 61 IM18 FBgn0067903 FBtr0091694 3 1 1 69 2R 19489210 19489228 ATTCTCAGCCGCTTCAGAG 59 19489106 19489124 CTATGCGACTCTGATCGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG30183 FBgn0050183 FBtr0273300,FBtr0072099 2 2 2 108 2R 19580461 19580481 TCTTTCTCGTTCAGAACTCTC 57 19580315 19580392 GGAAGTATTATTGGGCACCT 57 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 2 8 8 82 2R 19817073 19817092 GTGGCTGATTGGATCAATGG 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 Sox14 FBgn0005612 FBtr0072158,FBtr0072157 2 2 2 115 2R 19868163 19868181 CGGCCATGAAATGACACTG 59 19868260 19871076 GTTTCTTGGTTCGAGTCGC 59 NA Drosophila melanogaster 61 MAN1 FBgn0034962 FBtr0072166 1 1 2 80 2R 19921939 19922215 CTAGAGTACGTGTTTAGAGCGA 59 19922256 19922274 TAGCTTCCTGTGCAGTTCC 59 NA InUTR Drosophila melanogaster 61 Dat FBgn0019643 FBtr0072255 2 1 2 60 2R 20042520 20042538 GGACCAGTCGCTGATATCC 59 20042562 20043341 ATACAAGTCGTTCAGCCCA 59 NA DesignRelaxed Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700,FBtr0299699 3 3 3 81 2R 20308343 20308874 TGAGCGGAACTATACATTGGA 59 20308282 20308300 TACCGTAGAGGTCAGTTGC 58 NA Drosophila melanogaster 61 prom FBgn0259210 FBtr0299698,FBtr0299700 3 2 3 92 2R 20303187 20303426 CTTGAACAGTGATCGCACG 59 20303113 20303132 AGATACATGGGACTCTTCGG 58 NA Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433 1 1 3 80 2R 20657198 20659259 TTCGACAATAAGAACCAGAGG 57 20657138 20657158 CTCTCCAAATGCATCAAACAC 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0072379 1 2 3 120 2R 20721067 20721160 CACAGTGGCGGTAATAACG 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 3 5 5 81 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770667 AAGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301851 2 1 5 194 2R 20771011 20771029 AGCCCACCTATAACATGGC 59 20771246 20774754 TATGCTTCAATCTGTCGTCCT 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 1 7 8 116 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878692 20878710 CATCCTGGACCGATGAGTC 59 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 3 2 2 108 3L 151928 151946 ACAATGGTAGCGAAGAGCA 59 151781 151860 CATAAAGTATCCCGTTCATCAGG 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299988 2 1 10 90 3L 291097 291319 AGGATATTGTCATCAGGAAGGT 58 291367 291388 TAAAGTCTTCGCAGCATTACAC 59 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 1 3 3 80 3L 310167 310285 ATGATTCTGGCATCATCTGTG 58 310107 310126 AATCAAGCGACTCATGTGAG 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 3 5 6 82 3L 352338 352358 TCAGTATCTCGAGTTATCCGA 57 352402 352488 CATCAACCCATCTCACGAC 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 3 5 6 82 3L 352338 352358 TCAGTATCTCGAGTTATCCGA 57 352402 352488 CATCAACCCATCTCACGAC 58 NA Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0100256,FBtr0072662 2 2 2 80 3L 1285044 1285062 CAGATACTCTACCGCAACG 57 1285106 1287945 GTGACGACTGTCAACTAGC 58 NA Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 2 10 10 92 3L 1498351 1498369 GAGTACGCCAACAAACAGG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 1 1 3 99 3L 1803478 1803496 AGATCGGCTTCAACATCCC 59 1803555 1805019 ACATCGTAGACTTGACTGATCTC 59 NA Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 1 2 2 80 3L 2093803 2093823 CTGAACTGAAGGTTGTAGCAC 59 2092952 2093763 GTTCGTAATCGTACCAAGGAC 58 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 2 4 4 71 3L 2253685 2253789 CTGTATGGCAACTCCATTCTG 59 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072965 3 1 4 99 3L 2502463 2502481 GCTGTTCGAATCCCAAAGG 59 2500454 2502403 TAGGGATACAGCAGACTTTCTG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 2 9 15 81 3L 3083795 3084814 CTCGCCACTTATATGAATCGAC 59 3084852 3084874 CCAAATTAAGTAGTGAGAACCCG 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 3 4 13 89 3L 3516817 3552793 ATGCTAAAGATGGCGTCAC 58 3552846 3552864 TTAATCTGCCGAAGCTGTG 58 NA Drosophila melanogaster 61 enc FBgn0004875 FBtr0073153,FBtr0073152,FBtr0112844 1 3 4 108 3L 3833571 3833589 GTGGCGACTCAACAAACTC 59 3833660 3836030 TAAATGGAACCACTGCTGGA 59 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073175 2 1 2 99 3L 3909033 3909768 AATGAGGGAAAGACCTCCA 57 3908480 3908498 GGAACATCTCGGTTAGTCC 57 NA Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 3 2 2 89 3L 4154452 4155250 GACTTGAATCGGGAAGCTG 58 4154381 4154399 TTCCGACAGATCAAATGGC 58 NA Drosophila melanogaster 61 CG1268 FBgn0035521 FBtr0113137,FBtr0073230,FBtr0113136 3 3 3 63 3L 4262982 4263002 CAAATGAATCCCTTGATCGGG 59 4263027 4263045 AGGACCTTCCAATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 3 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 3 2 2 68 3L 5788653 5788671 CAGGATTTGTCCAAACAGC 57 5788198 5788216 CAGATTCTCGTACGTCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 1 2 11 136 3L 7042663 7043669 CCGAATACGAAACGCTACG 59 7043769 7043787 GAGGAATGCCTTGAAGGTG 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 3 6 11 81 3L 7005317 7005335 GCATTGGCAATGATTTGCA 58 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299691 1 1 3 87 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324324 7324407 TTGGAAACAGTCTTCGTCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 3 5 5 99 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333862 7333988 AGTAGTCATAGTCCCTAAAGCC 58 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 3 5 5 133 3L 7365497 7365515 GCGAGAATCAGCTAAGGGA 59 7365612 7365691 TTACGACAGGTAGCTAGGC 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 2 3 4 92 3L 7506485 7506633 CGAAATGGATCACGACCAC 59 7506689 7506707 GTCACTGGCACATAGACAC 58 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0290026,FBtr0076791,FBtr0290025 3 3 4 92 3L 7506484 7506632 TCGAAATGGATCACGACCA 59 7506688 7506706 TCACTGGCACATAGACACG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112694,FBtr0112702,FBtr0112698 1 3 15 121 3L 7689772 7689790 AACTACAGAGTCGACCCTC 58 7654598 7656370 CGCCTGTTTCAATTTCATGTG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302842,FBtr0302843 3 4 15 176 3L 7654600 7655092 ATCTCATCGCAGAAACAGG 57 7654442 7654461 TTGCTTTGAGTACTCTTGGT 57 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 2 4 5 109 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586650 8586668 GGTAAGTCGATGTCCATGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 2 5 13 84 3L 8623725 8627691 TTCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300208 3 1 2 85 3L 8889435 8889960 GCTTTGAATACCATGGTAACAC 58 8889371 8889390 GAGTTCCACTTCATCTGCAG 58 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 3 3 3 80 3L 8963988 8964061 GTGGAGTGATCTCTATTTGCG 59 8964101 8964121 GTGACAAGTTCCTGAATTTGC 58 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 3 5 5 83 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986076 8986096 TTGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 3 5 5 83 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986076 8986096 TTGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 CG32043 FBgn0052043 FBtr0114368,FBtr0076465,FBtr0114367,FBtr0076466 3 4 4 81 3L 9463471 9463489 CGACGTTTACGCTCTTCTG 59 9463532 9463674 CCATCCTTCGTGTAGATTTCC 58 NA Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 1 3 3 122 3L 9624229 9624301 CAAGTTCACAGGAGATGGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 1 2 2 89 3L 10081959 10081977 TGAGCTGGTTTATTGGAGC 57 10081408 10081906 CACTGGAGGTATATGCCAC 57 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076290,FBtr0076289 3 2 5 108 3L 10561696 10564182 GCAACAGAAGACACAGTACG 59 10564253 10564271 CACGGCATGTCCATTTGTC 59 NA Drosophila melanogaster 61 CG7888 FBgn0036116 FBtr0076200,FBtr0076199,FBtr0076201 1 3 3 96 3L 11051889 11051907 AATGACTATGTGGCCAAGC 58 11051967 11052053 CCAGGAGGAAGGTGATCAG 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 1 4 4 80 3L 11520328 11520347 CTGATCTCAAAGCCCTAGTG 57 11518762 11520285 CAAATAGAGCGAGGGTGTG 58 NA Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 3 3 3 60 3L 11622555 11622573 ACAGTGGACTATCGCACTC 59 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 2 3 3 80 3L 11622535 11622553 GAATGTGACGTTCAAGACG 57 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 3 3 3 93 3L 11681178 11681257 TGCTACCATGCAGAGTCTG 59 11681313 11681332 AGTGACCGACTCAAATAGCT 58 NA Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 2 2 2 140 3L 11688021 11688039 GCCACTTAGTCCTGGAGAG 59 11687835 11687920 TACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 3 2 3 80 3L 12406591 12406610 ATCGATATCCACGACCTGTC 59 12405539 12406550 CGACTGCTGAAGGAATTTCTC 59 NA Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113168 1 1 3 85 3L 12471220 12474756 TCAGGTGTAGTGGCTATGTG 59 12471154 12471172 ATAGTGCTGATGGTGTCGA 58 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 2 4 4 80 3L 12558130 12564649 AGCCAGAGAAGCAATTAATCG 58 12558070 12558089 AGACTATCCACTCCTTTGCC 59 NA Drosophila melanogaster 61 CG11255 FBgn0036337 FBtr0075895 2 1 2 94 3L 13014647 13015545 ACGCTACAAGAAGGAATCC 57 13014571 13014591 TTCATAGAGTACTTCTGCAGG 57 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0114573 2 2 3 115 3L 14058245 14058720 CAAGGAGTCATCGGAAACG 58 14058799 14058817 ATCCAGGAACTCCTTCACC 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 3 2 6 150 3L 14219495 14223285 AATGAGCAACTGGAACTGC 58 14223399 14223762 GTTCCGACTCTCGGTACTG 59 NA Drosophila melanogaster 61 bbg FBgn0087007 FBtr0273428,FBtr0273422,FBtr0273427,FBtr0273425,FBtr0273423,FBtr0273424,FBtr0273426 3 7 7 80 3L 14407795 14407884 GAGGCTAAGGAAATTACGATCC 58 14407736 14407756 TCGATCACCCTTCTTTAGACG 59 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 3 3 3 80 3L 14620527 14620546 CTATGTGACCTTTGGAGCAC 58 14620589 14620667 CGCCATGGAGTCAAATCAC 59 NA Drosophila melanogaster 61 CG10006 FBgn0036461 FBtr0075628,FBtr0113171 2 2 2 84 3L 14989527 14989604 CAGAAGATATGGTACGCTTGG 58 14989650 14989668 GAACCAGAAGAATGCCCAG 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075569 2 1 4 90 3L 15598300 15598318 GTCTACTAAGACCACCGCC 59 15598371 15599768 ATGTTGCCAACCGAATTGAC 59 NA Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 1 2 2 80 3L 15921311 15921397 GTCAAACCTCCAACTTCTATGC 59 15921252 15921273 GATCGCGATAAACAATTTGCAG 59 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 2 4 4 89 3L 15964324 15964402 CCATTCTAGGTCGAGGCTC 59 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Abl FBgn0000017 FBtr0112790,FBtr0075357 2 2 2 80 3L 16621683 16621777 GAGCATCAGTTTGAGATACGAG 59 16621624 16621643 TGGGTAACGAAGACTTTCCC 59 NA Drosophila melanogaster 61 zetaCOP FBgn0040512 FBtr0075352,FBtr0075353,FBtr0075351 1 3 3 80 3L 16665635 16666165 CGACGGAGGCATTATTCTG 58 16665573 16665591 GCAATGGGAATGTCATCGT 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 2 10 12 134 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 2 2 3 83 3L 18880214 18880232 TACTACTTTGCAACGAGGC 57 18874340 18880167 TTGTTCTGGACCCTCTAGC 58 NA Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990 2 1 2 164 3L 19254747 19254824 CTGAGATTTCAATCCGGATGC 59 19254950 19254968 TTCTGCTTCAACTCCTCCG 59 NA InUTR Drosophila melanogaster 61 pip FBgn0003089 FBtr0075004 2 1 12 80 3L 19301790 19301867 TACATCAACATGATTCGAGACC 58 19301731 19301750 TTTGACAGAGTTCCAGGGAG 59 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 1 2 2 116 3L 19598219 19598237 CTAGACATGATCCGCAGTG 57 19598066 19598141 TGTGTAGCACATAAGATCCTG 57 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 2 6 6 91 3L 19853428 19853510 AGACAGCATGGAGATCCTG 58 19853565 19853583 ACTCATCCTTCCTCTTGGG 58 NA Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0074850 3 1 3 175 3L 20232701 20232970 ACAAAGTGCAGATTAAGCAGG 59 20232546 20232564 ATAGGTGTCCGGTTCTGTG 59 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 2 5 5 145 3L 20381816 20381834 GTCTACTTCGAGCCCAAGG 59 20381941 20383029 TCGACATTGTCCATCTGTAGG 59 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0301529,FBtr0112678 3 2 3 166 3L 21321362 21322909 TGGGCAAGGTCATAATGCT 59 21325732 21325750 CCAGATTTGCAGCTTGACG 59 NA DesignRelaxed Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 3 3 4 117 3L 21488958 21489529 GAAGTGATTCTGTGCAGCAC 59 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 1 2 2 80 3L 21605218 21605236 AAGTACAGCGTCGACTCTC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 eg FBgn0000560 FBtr0078437,FBtr0078438 3 2 2 73 3L 21807934 21807953 CATTTACATGTGAAGGCTGC 57 21809410 21809428 CTTACATCCTGCAATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33170 FBgn0053170 FBtr0299877 1 1 2 80 3L 22859043 22860503 GGATCAAACCAAGAACAAATCG 58 22860541 22860562 CAGTCGTCTAGTATCTTCTTGG 57 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 2 3 3 81 3L 22885585 22885672 AATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 CG1116 FBgn0037297 FBtr0078775,FBtr0078774 3 2 2 108 3R 1046185 1046269 ACCTTAAGAACGTAACCGCT 59 1046340 1046358 TCACCGAGCTTATACGCTG 59 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078686 2 1 2 95 3R 1356980 1357000 TCTAAGACTTACGAAGACGCT 58 1357055 1357391 CCACCTTCGGAATCAATATCC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300913,FBtr0078676,FBtr0300907 3 4 12 87 3R 1587428 1587903 CAAGAACAAGTTCATTAGCTGG 58 1586959 1587382 CCAGTTATGTCCGAATTTGTG 57 NA Drosophila melanogaster 61 CG34113 FBgn0083949 FBtr0110806,FBtr0110807 1 2 2 80 3R 1712727 1712815 GCATCGAGATGTTACTCAAACC 59 1712668 1712687 GATTGTACTGCGTGTTCGAG 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 2 5 5 117 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216706 2216724 TGGAACTGGTGATTCTGCA 59 NA Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 2 2 2 81 3R 2897685 2897704 GCCATACTGCAGCATATTCG 59 2897569 2897641 CTTGCAGGACCAAATCGTG 59 NA Drosophila melanogaster 61 alphaTub84B FBgn0003884 FBtr0081639 3 1 1 93 3R 2912398 2912419 CGTAGCTCTACACAATTCTGTG 59 2912956 2912980 CAACATGGATAGAGATACATTCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 rn FBgn0259172 FBtr0300518,FBtr0299639 1 2 4 179 3R 3126367 3126385 CACTACATGTGGAACGGGA 59 3118150 3120142 CAGAAAGTGACCTTTCTGCA 58 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302354 2 1 2 80 3R 3322495 3322516 TTACAGTCCGGATTATTTGCTG 58 3322382 3322454 CACAGAAATCCCAGTGGTC 58 NA Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 2 1 1 60 3R 3597125 3597146 CATCCCAGCTACGATATAAAGC 58 3597027 3597045 CCAGATACCGCACATAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 3 2 2 82 3R 4060875 4060893 TAAGCCAATATCCGTGCGT 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA DesignRelaxed Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0089782,FBtr0089781,FBtr0114459 3 4 8 80 3R 4661229 4664128 ATGTCCGAGTCTAAGCCAG 58 4661167 4661185 TGATGCATACGAGAGTCGG 59 NA Drosophila melanogaster 61 CG11983 FBgn0037654 FBtr0081966 2 1 1 60 3R 4834595 4834614 GCACAGATCTACCAAAGAGC 58 4834694 4834713 CCTGAGTGTTCCTACGTACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11984 FBgn0037655 FBtr0300743,FBtr0300745,FBtr0300748,FBtr0300747,FBtr0300744,FBtr0300746 1 6 6 80 3R 4838974 4839046 GACATGAAGGTGTCAGCTG 58 4838912 4838931 AGTCATAGCAGATCAAGCAC 57 NA Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 1 2 2 69 3R 5341136 5341154 AGTCTTCCCTAGTCCGGAG 59 5341034 5341052 CCTCACTACTGTCTCCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8176 FBgn0037702 FBtr0113208,FBtr0113207 3 2 4 80 3R 5348545 5348565 CTGGCACGAATAATCTTACCA 58 5348605 5349269 GTTGTGTCTGATCTTGATTGC 57 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 2 4 4 81 3R 5592946 5592966 CCCTTCTATGATCACATGTGC 58 5592831 5592903 GACCGATCATGTTGTGCAG 59 NA Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 3 2 2 127 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175612 6175631 TTATTCGGCTTGATGTTCGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100320 3 1 3 99 3R 7390429 7390519 TCATTCATCTTTCGGCGTC 58 7390348 7390366 AGTCAGGGTGTAGGTATCG 57 NA Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 2 2 2 131 3R 7409666 7409687 GCCTACTCGATATACAATCCCA 59 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 CG31116 FBgn0051116 FBtr0082528,FBtr0113391 3 2 6 116 3R 7628403 7631767 CATCGATACTCTTATGTATGGTCG 58 7628310 7628330 TTCCTTTGCTTATCTTCCTGC 58 NA Drosophila melanogaster 61 CG10097 FBgn0038033 FBtr0100524 1 1 2 80 3R 8217505 8217578 CGGGTGTCATAATTGCCAG 59 8217443 8217461 CGTAGAGAACTGCAATGGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 3 5 5 136 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210484 9210502 TTAACTCGATGTGCACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 sqd FBgn0086897 FBtr0082857,FBtr0082855 3 2 4 189 3R 9462792 9468030 TACGGTTATGACGGCTACG 59 9462176 9462194 TTTAGTAGGGCTGATGCCG 59 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 3 2 3 81 3R 9484276 9484366 CAACAAGGGTAACCAGGGT 59 9484213 9484231 CATATTTCCACCCTGGCCA 59 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 2 9 9 80 3R 9504343 9504364 TACCTTACTTGGAAGCTTACCA 58 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273373 2 1 5 85 3R 9892798 9892818 AGATTTACGAGTGGATGGTCC 59 9892865 9904973 TTGCAAATCCTTCCATCCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG7530 FBgn0038256 FBtr0083020,FBtr0083021,FBtr0083019 1 3 3 89 3R 10551824 10551842 TACATTCGTCGCGGATACC 59 10551644 10551774 GATGTTGATCGTCTCATTGGTC 59 NA Drosophila melanogaster 61 CG3563 FBgn0260465 FBtr0082989,FBtr0113234,FBtr0082988 1 3 3 118 3R 10616867 10616885 TACAGTAGTGCCTCGACTG 58 10616967 10619175 GTGGCTTGTATCTTGCCAC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049 2 1 2 118 3R 11039820 11039901 CATGATTCAAGAACTGGCTG 57 11040047 11040068 GCACATAGACTTCACAATACTC 57 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049 3 1 2 119 3R 11039819 11039901 CCATGATTCAAGAACTGGCTG 59 11040046 11040068 GCACATAGACTTCACAATACTCC 59 NA Drosophila melanogaster 61 CG34316 FBgn0085345 FBtr0112514,FBtr0112515 1 2 2 80 3R 11056750 11056768 CCTTATACACCGCCAAAGG 58 11056810 11056896 AGTTTGTAATGGAGGTTTCGG 58 NA Nonspecific Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957 2 1 13 99 3R 11126777 11126795 CAACACCCGTCTAAAGGAG 57 11128937 11132073 GATTAGGTCGTCTTCGAGC 57 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 1 7 13 125 3R 11122321 11122339 AAATTCTTGAGAACCGCGC 59 11122428 11125014 CCAATTTACGGGCAACCTC 59 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 1 1 1 87 3R 11158365 11158383 GACCTGAACTTCAGCAAGG 58 11158229 11158247 CAATGTCGTGCAAGTAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34404 FBgn0085433 FBtr0112669,FBtr0112668,FBtr0112667 1 3 3 91 3R 11191554 11191572 CTGAACGGGTTAAGTTGCG 59 11191419 11191502 CAGATTAATTTGCTCGTTGCTC 58 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083106 2 1 2 178 3R 11231021 11231112 CATTTACGATCCTGGCTGC 59 11230861 11230881 CTCGATCGTAACTGGTAATCC 58 NA Drosophila melanogaster 61 CG5516 FBgn0038389 FBtr0083212,FBtr0302549 2 2 2 235 3R 11789811 11789897 AAAGAAGAGATCCGCAAAGC 59 11790095 11790113 TTCGACGGACCTTCTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 msps FBgn0027948 FBtr0301479 2 1 2 97 3R 11885016 11885037 CCATTTCACAAGTACATCGAGG 59 11885095 11885198 TAAGAACGAGTAGCTGCCG 59 NA Drosophila melanogaster 61 msps FBgn0027948 FBtr0301480 3 1 2 81 3R 11885029 11885047 ACATCGAGGAGGGTTTAGC 59 11885092 11885219 TGGTAGTTGACATCCGTCC 59 NA Drosophila melanogaster 61 CG31279 FBgn0051279 FBtr0301434,FBtr0301433 3 2 2 93 3R 12256832 12256850 GATGGGAAGGATCTTTGGC 58 12256906 12257015 GTTGTACAGAGACACAGTGG 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 2 5 5 114 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377354 12377373 GTGGAAGCGGATACATTGAC 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 3 3 5 135 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391566 12391584 CCCTGATCTCCCTTGTGTC 59 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 1 3 5 133 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391564 12391582 CTGATCTCCCTTGTGTCCC 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352,FBtr0083347,FBtr0083349 3 3 6 70 3R 12558426 12558444 GAGTGTCCTGAAGATCCGA 58 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Ssdp FBgn0011481 FBtr0083611,FBtr0083613 3 2 3 240 3R 14024463 14024483 TCAAAGTATTAGGGCGTTCAC 58 14022662 14022680 GAGAATGAAACGCACCGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307 2 1 2 100 3R 14191327 14191405 ACTCCAGATGTGAAGACTGAG 59 14191247 14191265 TCCTCTGCCATTGAACGAG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083649 2 1 14 120 3R 14329661 14329679 ACATAGACAGTGCCTCCTG 58 14261504 14329577 GTGTTGTACCAAAGAGGCA 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301694,FBtr0301693,FBtr0301692 2 3 3 80 3R 15071132 15071289 TCTCAAACTCTACTAACTGTCC 57 15071073 15071091 AGTGGGATCTTCAAGAGGA 57 NA Drosophila melanogaster 61 Dl FBgn0000463 FBtr0083739,FBtr0083740 3 2 2 143 3R 15137653 15137672 GCGATCTCAACTACTACGGA 59 15134475 15137548 CGCATTTGGGTATGTGACAG 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083760,FBtr0083758 1 2 3 80 3R 15229770 15229790 CGTATCAACAAGCCTGAAGAC 59 15229831 15230032 GCGTAAAGCTTTGTGTAGGG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0083787 3 1 7 83 3R 15586690 15586709 TTACACCTACCTCGCTTCAC 59 15586755 15589342 GACTTTGAGGCAAGTACCG 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 3 3 5 80 3R 16367272 16367419 GATCGAAGACAGGATAATGTCC 58 16367213 16367231 TCGTTGAACTTTAGGGCCA 59 NA Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 2 3 3 107 3R 16526041 16526324 GTCTTCAAGGTTTGGATATTCG 57 16525955 16525973 GTCCAGTGATATGGCACAC 58 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 2 3 3 114 3R 16837649 16837667 TACAGTCGACAAGCTGGTG 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 1 3 4 172 3R 16881620 16881699 TTTGTTAATGGACTGGGCA 57 16881403 16881422 ACAAGGTAGAGGTTGAACAG 57 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084065 1 1 22 92 3R 17200847 17200865 CTGTGGTCAAGCAACAGTC 59 17178951 17200791 CCAGAACAACTTGAGCCTC 58 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 1 2 2 81 3R 17231539 17231557 TGTCTTCATCTGGGATCCA 57 17231600 17231709 CAACCAAATCCTTGAAGACAG 57 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 1 4 4 85 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077 2 1 2 106 3R 17701345 17702308 TATCCATAATGAGCGCCCAG 59 17702377 17702395 AGATAGCGTATTGACGGCC 59 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 1 2 3 80 3R 18209066 18209139 GCTTATGCAACACGAATTTCC 58 18209181 18209199 TCTATCATCAGTTCCGGCG 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 1 5 5 80 3R 18430301 18430378 GCAGCTTTAAGAAGACTCCC 58 18430419 18430439 GCAAATACAGCACAAGATCAC 58 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 2 3 3 121 3R 19008674 19008692 GCAGACACGTTTCAGTTCG 59 19008777 19009178 TGGTGAAGATGTCCTGCAG 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390,FBtr0110801 3 2 2 80 3R 19057610 19057629 TTTCCAGTCACCTATGTGAC 57 19057480 19057569 CACATTGAAGGTTACATCCAC 57 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425 2 2 3 104 3R 19340174 19340192 CGCTTTAACGAAACCACTC 57 19340035 19340106 AAAGGTGGTTTCTGGTGTG 58 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 1 3 3 80 3R 19574387 19574472 CCGACATTATCATCAAATGGCT 59 19574510 19574531 ATTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 RpS19b FBgn0039129 FBtr0084519 3 1 1 101 3R 19758876 19758894 TCACCAAGGTCTATAGCGG 58 19758723 19758741 CTTCCAAGGCTTGAAGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 1 5 5 100 3R 19824625 19824643 TAAGGAGCGTGATCTCGAG 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 1 5 5 100 3R 19824625 19824643 TAAGGAGCGTGATCTCGAG 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 1 4 4 99 3R 19870978 19871168 GAAATCAAGGTCAACTGGGC 59 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084581 2 1 3 85 3R 19977709 19977825 CAATGATATGCGCATTCGTG 58 19977643 19977661 CATTCCGATGCGTGTTAGG 59 NA InUTR Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 3 6 6 80 3R 20025043 20025061 AAGACTATGTCCGAGCTGG 58 20024920 20025001 CTTGATCAGCGTAAACTTGGA 58 NA Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 2 2 2 81 3R 20340086 20340104 GCTGTATGTGCCATCTGAG 58 20339966 20340044 CAGAGTTACTTCATAGTTGCCA 58 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0100629 3 1 18 105 3R 20526442 20527819 TCGTTGTCAAATGAACACCA 58 20528743 20528763 CTCTGTCACGAGTGATATCAC 58 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 1 3 3 80 3R 20869766 20869842 TCTTTCCGGAGTGTAAATGGT 59 20869706 20869725 TGACTAGATCGATGACGGTG 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662 2 2 3 82 3R 20869000 20869021 TCAATGAGATTATCCAGAGCGA 59 20868395 20868958 GTAAACAGGCTTATGGTCGC 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 3 3 3 62 3R 20877260 20877278 CTACAATTGCCTGAGTCCG 58 20878230 20878248 CGAAATCCCTTAAAGCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 2 5 6 88 3R 21182007 21182025 CTTCATGTCTGTGCACACC 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 3 5 5 104 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507760 21507838 AAAGATGGCGTAATGGTCAC 58 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113388 2 3 7 80 3R 21531747 21532016 CGAAGATCTGGGTATCCCA 58 21531685 21531703 TTTGTGGTTGAGTTGGACG 58 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 1 2 7 152 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573921 21573939 ATTCATCCGGTGAACAGGT 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100 1 4 10 109 3R 22402355 22404452 ATCAGTGAGGAGGTTGTGC 59 22404525 22404543 AATATGCCAGGCTCTCGAG 59 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 1 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809929 22810007 TTAAAGATTTGGCTCTCGCTC 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0112834 2 1 12 80 3R 22892914 22893091 AATCACTTACAGTACGAGGC 57 22892853 22892872 GACAACTCCCTCATCATTGG 58 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 2 3 3 125 3R 23512757 23512777 AATGACACCCAATTTGTCGAG 59 23512282 23512672 TTGCCGAATCTTACAATCCTG 58 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 1 2 3 112 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652797 24652815 TATCCTTGACGAAGCACAC 57 NA Drosophila melanogaster 61 CG31048 FBgn0051048 FBtr0289996 2 1 2 81 3R 24694638 24694656 CGATGGTTATAGCACGCTG 58 24694701 24694830 CTGATGTGGAGCAGAAGGT 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 1 4 13 134 3R 24714131 24714149 CTAACGCAACTCTTGAGCG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 2 4 13 135 3R 24714130 24714148 GCTAACGCAACTCTTGAGC 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 2 3 4 113 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 3 3 4 81 3R 25327202 25327437 TTTGGACCATCAGACTAATCCA 59 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475 3 1 2 159 3R 25566134 25566304 AACTTACGGAGGAGACATATCTG 59 25566423 25566441 AATCCACGATCGTAGTCGG 59 NA Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 2 1 1 71 3R 25631446 25631464 AAAGAGGAGCTATCCGAGC 59 25631334 25631352 TTCTGTGCTTAGAGCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085692 2 1 4 87 3R 26275674 26281383 GATGCCAAGAATCTCCGTC 58 26275605 26275623 TTCTTCTGGATGGATGCGT 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085692 3 1 4 88 3R 26275674 26281383 GATGCCAAGAATCTCCGTC 58 26275604 26275622 ATTCTTCTGGATGGATGCG 57 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085681 3 1 3 91 3R 26345394 26345412 TGAGCTACAAACAGTGGCT 59 26344287 26345341 GTGCATGGACTCTTTATCCAC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085675 2 4 13 197 3R 26421341 26426933 CAGCGGAACAAATTAGGCA 58 26421162 26421182 GATCTCCACAATAGTCTCCCT 58 NA Drosophila melanogaster 61 CG15553 FBgn0039817 FBtr0290201,FBtr0290200 3 2 2 80 3R 26926453 26926531 CAGAAATACAGGCAATTGAGAC 57 26926394 26926414 TAATACTTTCGAAGAGGGTGC 57 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 2 3 3 83 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043630 27043648 TCAATGGTCGCAAGTACTG 57 NA DesignNoJunction Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 3 3 3 80 3R 27398867 27398982 GTTTGCATGCTGATACGCA 59 27399026 27399044 CAAGGGTGAATCGGAAAGC 59 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085839,FBtr0085840,FBtr0085838,FBtr0085841 1 4 4 97 3R 27575159 27575177 ACGTAAGCTAGACGTAGGC 59 27575238 27575315 TCTTGACAGCTCCCTTTCC 59 NA Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 2 1 1 223 3R 27593855 27593873 TATGTAAGTCAAGCGCGGA 59 27594118 27594136 CAGTTCTTTGCGTTTCTGG 57 NA DesignNoJunction Drosophila melanogaster 61 pan FBgn0085432 FBtr0112657 1 1 10 126 4 113787 113805 TTTAAAGAGCGCCTATGCG 58 113895 115062 TTGCTTCCAGGTTCATGTG 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 3 8 10 80 4 115557 115578 CACGAGATAACTATGGTTACGT 57 115618 120040 TATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 1 6 7 81 4 470584 470875 AATGGAACGCGGTTAACTC 58 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089972 1 1 2 128 4 654367 654385 GAGGGCTTTATCACTGCCA 59 654474 654555 CATGCCACCTTGTGTAATACAG 59 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 3 6 6 101 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974432 974452 ACTGAAGTAGGAGTAAATGCC 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 2 4 7 148 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079843 1079865 GAAGCTCACTGTATGAAGAACTC 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0301563 1 1 8 86 4 1119576 1122570 ACTACACATGTCATGGAGGC 59 1122619 1122637 CAATACGCTGACGAACGAC 59 NA Drosophila melanogaster 61 CG11155 FBgn0039927 FBtr0089194 1 1 3 108 4 1153191 1154510 TATCCTAGGGCAACCTCGA 59 1154579 1154600 GTTCAACTGTTAGAAATGCAGC 58 NA Drosophila melanogaster 61 Dyrk3 FBgn0027101 FBtr0100402,FBtr0100404,FBtr0100406,FBtr0100403,FBtr0100405 2 5 5 81 4 1230678 1230696 CACCAAGTAGCTCAAGTGG 58 1230563 1230634 CTATTCTGCCCTGTAACTGG 57 NA Drosophila melanogaster 61 sphinx FBgn0083990 FBtr0111044 2 1 3 75 4 996158 996177 GTATAAAGTAAGTGCCGGCC 58 997415 997436 TCGATACTGACAGTATGTACAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG17691 FBgn0039993 FBtr0302409,FBtr0113761 3 2 4 148 U 1183496 1184087 GACTTCGTGTTGTGGTACC 58 1184198 1184217 TGATGTATAGTACTCCGCGG 58 NA Drosophila melanogaster 61 CR41604 FBgn0085814 FBtr0114272 1 1 4 150 U 3443383 3443401 AAGTGTAGTGGTCACCGTG 59 3443515 3448775 TTTGCAGACCCTTCTTCGT 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100582 3 1 8 187 X 167374 167394 TGATCAACTGCTACAAGTACC 57 165900 167226 AACAATCAGATTGCTGTTGC 57 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 2 6 8 85 X 398749 398768 TCAAGAAGCAGTTCAATGGG 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 1 4 4 86 X 423498 423516 GTTCGCCAAGAACTTGGAC 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG5273 FBgn0040382 FBtr0070136,FBtr0070137,FBtr0070135 3 3 3 269 X 654532 654550 CACAACAGTCCTCCTCTGG 59 654936 654954 TGTTGGAAGAGGGAACTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 2 5 6 152 X 1383714 1383732 GACAAGCATGGCATCAAGG 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 3 9 9 96 X 1531086 1531104 CTCAGTTCATCATGTCGCC 58 1531164 1531326 GTGTTGAGACCTAGCAACG 58 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0070308 3 1 2 155 X 1760164 1760254 ATGCACAGACTAAAGGGACTC 59 1760371 1760389 CATCTGAAAGGGTGCATCG 59 NA Drosophila melanogaster 61 eIF2B-epsilon FBgn0023512 FBtr0070350,FBtr0070351 3 2 2 120 X 1814951 1814969 GACAACGTACTAGTGGCCA 59 1814788 1814867 CCTCGTACACATCCTCCAG 59 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070481 2 2 3 108 X 2608388 2608406 ATTTCCTTACCTCCACGCC 59 2608478 2608553 GAACCAGGACCTATGTCCC 59 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570 2 1 3 127 X 3408360 3408432 TCCGTCAAATTGCACATCTG 59 3409314 3409332 GATCCGTCAAGTTGGACAG 58 NA InUTR Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 2 3 4 81 X 3846006 3846024 GGTGCCAATACTAGCTCAG 57 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 1 3 5 83 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 1 2 2 175 X 4528057 4528077 TCTAGGAATCGATTTGCTGTG 58 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG32767 FBgn0052767 FBtr0300994,FBtr0302118,FBtr0302119,FBtr0300995 2 4 4 82 X 4972206 4972224 CATTCATCATTCGACCGGA 57 4972051 4972161 GCGAAATAACACCTGTTTGC 58 NA Nonspecific Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 2 5 7 102 X 5277590 5277611 TCTAATGACAATATGTCCGGGA 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 MAPk-Ak2 FBgn0013987 FBtr0070837,FBtr0070838,FBtr0070839 2 3 3 91 X 5654841 5655209 ACGATCAGATGCAAATCAAGG 59 5654770 5654792 CATGTATAACTCCATCTCCTCGA 59 NA Drosophila melanogaster 61 CG3192 FBgn0029888 FBtr0100409,FBtr0070990 3 2 2 68 X 6571711 6571729 TATCCCTGGGACTATCCGG 59 6571585 6571603 GTACAGATCATGATCCGCC 57 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0255 FBgn0028336 FBtr0070954,FBtr0070953 1 2 2 80 X 6575392 6575476 CATTCGGCTATTGTCTGATGG 59 6575518 6575536 GCAATATTCTCGCGGTTCG 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 1 3 6 105 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680751 6680769 AATCTCCGAATTGCTGCTG 58 NA Drosophila melanogaster 61 CG14435 FBgn0029911 FBtr0071042 2 1 2 81 X 6735553 6735572 ATTTGCCTGGAGGATCTGAG 59 6734457 6735509 GGTCGATGCATCCTTTGTG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100214,FBtr0300843,FBtr0100200,FBtr0300839,FBtr0100205,FBtr0100201,FBtr0100206 2 7 21 81 X 6982619 6982637 TTGAATCGAGGACACCTCC 59 6979979 6981658 TTCTGTATCCATTCCGGATGG 59 NA InUTR Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572 3 1 2 214 X 6975024 6975043 GATGCTATCTTTGGTCTCGA 57 6973208 6973226 TGCTGGTGGTAAAGTAGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 2 2 2 118 X 7235525 7235615 TACTTGTTTAAGGCTGTGGAC 58 7235695 7235713 ATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 1 3 3 140 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766824 7766842 AGAATCGAGTAGGCTGGGA 59 NA Drosophila melanogaster 61 CG1440 FBgn0030038 FBtr0071197,FBtr0112961,FBtr0112962 3 3 3 81 X 8333723 8333742 AAGAAATGCTTTCCCGAGAG 58 8333786 8333864 CATACTCCCGTAGCTTGCT 59 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 3 4 5 80 X 8404727 8406393 CAATGGAAACGATCCCGAC 59 8406434 8406455 GTCGTGATGATTGAGCTTAGTG 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 1 2 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442548 8445792 GTAAATTGTCCTGTATCGCCA 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 3 4 6 93 X 8917352 8918118 TGGAAGAGCCCTATACTGGA 59 8918296 8918315 CTTGTTCATGTAGTGCACGT 58 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0114595 2 1 5 164 X 8989678 8991399 ACTTCAATACGGGCATGCT 59 8989532 8989550 GATCTGTTACCGCTTTGGC 59 NA Drosophila melanogaster 61 CG7039 FBgn0030088 FBtr0071293 2 1 1 81 X 9001228 9001246 CTACTGCGTGGTAATCCTG 57 9001358 9001376 GTTACGCGTAAACGTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0071439,FBtr0112675 1 2 4 80 X 10120393 10120556 TGACCACCTATGATAATGCCC 59 10120598 10120616 TCTTCCACGACGAGATCAG 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 Ork1 FBgn0017561 FBtr0073405,FBtr0073404 2 2 2 80 X 10774599 10775516 AAAGTGAAGCCTGTGTACAC 58 10774538 10774556 GTACATGCTCAGATCCGGA 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301535 2 1 8 98 X 13664830 13665171 GCAGACATGTGGCTAACTG 58 13665233 13665324 TCGTCTCATTGGTGTCCAG 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0301045,FBtr0073833,FBtr0301044,FBtr0301046 2 4 4 80 X 13726825 13726845 ATCCAGATATGAGCCAATTCG 58 13726693 13726784 AGCAGAAGGATTTCAATGGC 59 NA Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 2 2 2 81 X 14880362 14880380 TGCAATGAGTCCTTCTGCA 59 14880425 14884363 TGAAGCCGCATACATACCT 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 2 2 12 81 X 15793037 15793055 CCTGGAAAGCATCCTTCCT 59 15793100 15793487 TCTTGTCCTTCCTCATCGC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298 3 2 4 86 X 16380926 16381924 ATTATCATGATCACAAGGACCG 58 16380861 16380879 ACACGATCATGAAGCTGTG 58 NA Drosophila melanogaster 61 baz FBgn0000163 FBtr0111000 2 1 2 104 X 17086975 17086994 ATGGTATCCATCAGAACGAC 57 17087061 17087356 AATCGCCTCCACTAATCTG 57 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998 1 1 3 166 X 17461453 17461471 GCTATAAGCGTGAGGTCCT 59 17461245 17461323 TTCGTAAAGCTCTTGGCGA 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300979,FBtr0300975 1 2 6 80 X 17796055 17796077 CAAGTCGAGATCAATACGATAGC 59 17796113 17798655 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 1 3 7 91 X 18003566 18003584 CGAAGAGTATTACGAGCGT 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 1 3 3 80 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027154 18027174 GTACGTGTACATGAGAGTCTG 58 NA Drosophila melanogaster 61 Pvf1 FBgn0030964 FBtr0301667,FBtr0074640 3 2 2 101 X 18734582 18734673 ATCATGAAATCAACCGTGAGG 58 18734736 18734754 GTAGTAGTTCGCCTCGTCC 59 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694 3 1 2 104 X 19093490 19093872 CAACTATGGCCAGATCAACAC 59 19093406 19093424 AGTTCATGGAAGCTAGCCA 58 NA Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0074678 3 2 3 117 X 19157975 19163294 GACCTGCATTCCACTACCA 59 19163375 19163393 TTCTACTCGTCCTGTGCAG 59 NA Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 2 2 2 134 X 19729780 19729799 AATCACTGCTGGTTGATGAG 58 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091461 3 1 5 103 X 19901794 19902877 TGTCGATAACTCCAGCGTC 59 19901709 19901728 ATGTAGTCGATAGCGTCGAG 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0114645,FBtr0112570,FBtr0112569,FBtr0112572,FBtr0112571 1 5 5 80 X 20644230 20644250 AACGCTAATATACAGGGTGGT 59 20643792 20644188 CGCACTAACCTAAATCGCA 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827 2 1 3 82 X 21004475 21004493 CAGAGATCGATGCAATGCC 59 21004615 21004854 TTTGCAGTATTTAGTTGGCCTC 59 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 2 5 5 96 X 21473853 21474022 AATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG32819 FBgn0052819 FBtr0070051,FBtr0070050 1 2 2 191 X 21490585 21490726 CATGAATCGCAACCTCTCG 59 21490412 21490430 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 mir-9c FBgn0067678 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30238 FBgn0050238 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32360 FBgn0052360 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S2b:88A FBgn0011971 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S774:12Ef FBgn0011981 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:ND2 FBgn0013680 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:ND4L FBgn0013683 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR34311 FBgn0085340 FBtr0112509 1 1 1 147 X 20254908 20254926 ATAAGTCTGCCCAGACTGC 59 20254723 20254798 TTTGAGTTCAGTATTCCGCG 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299525,FBtr0299522,FBtr0299523,FBtr0299526 1 5 5 80 X 21898313 21898331 ATTTCGGTGCATGTATCCA 57 21898374 21898508 GAGTGCAATCTTAGCAAACC 57 NA Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 dod FBgn0015379 FBtr0077193 2 1 1 157 X 21216388 21216406 GTTCTCAAAGCGTGTTCGG 59 21216527 21216656 TAGCTCATTCCTGTGGAGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG1753 FBgn0031148 FBtr0077245,FBtr0077244 3 2 2 101 X 20918348 20918366 GATTACGCCCAACATCCTC 58 20918431 20918593 CACTTGGCATACATCTCGC 59 NA Drosophila melanogaster 61 Mgstl FBgn0025814 FBtr0077243 1 1 2 124 X 20914315 20914713 GTTTCAAGACGAAGACCTTCG 59 20914799 20914817 CAGGATGTTCTCCAGGTCG 59 NA Nonspecific Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0077267 3 1 2 128 X 20902714 20902732 CTGAGATCTGCAACCTGTG 58 20902551 20902623 TAGGAAAGAACCTGTCGACC 59 NA InUTR Drosophila melanogaster 61 CG11229 FBgn0031138 FBtr0077282 2 1 1 60 X 20782757 20782775 CTGATGACGACAAAGACGC 59 20782797 20782817 AGAAATACGTAGGAGATGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RunxA FBgn0083981 FBtr0110992 2 1 1 97 X 20464603 20468113 CAATTGTCAGAGTGCAAGCA 59 20464525 20464543 TGGTGCAGGACGATAATCC 59 NA Drosophila melanogaster 61 CG11710 FBgn0031115 FBtr0089643,FBtr0089642 1 2 2 100 X 20299187 20299267 ATTAAGAAACACGAGGGTCGA 59 20299107 20299125 ATTTGCGCAATGTCTTCGG 59 NA Drosophila melanogaster 61 Obp19b FBgn0031110 FBtr0077302 1 1 1 155 X 20287814 20287832 AACCTTCTGCTAGCAGTGG 59 20287951 20288034 CTCGACGATGTTCTCCCTC 59 NA Drosophila melanogaster 61 CG15458 FBgn0040651 FBtr0077328 3 1 1 89 X 20285084 20285102 TTCAACTTCAACGAAGCCT 57 20284951 20284969 GTAGACGAGTCCCAACGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 1 2 2 148 X 20118059 20118077 CAGTTCTTCCTCTGCACCA 59 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific Drosophila melanogaster 61 CG17003 FBgn0031082 FBtr0070035 3 1 1 60 X 19895247 19895266 CAAATTCCGGACCCTTTAGG 58 19895206 19895225 CGTCGATAGATCGATGTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14229 FBgn0031059 FBtr0074753 1 1 1 211 X 19588889 19588971 TGAAGACAAGAAAGCGCAG 58 19588696 19588714 GTTGTATTCGTATCCGGCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG14227 FBgn0031058 FBtr0300350 1 1 1 81 X 19582287 19582374 CAGTATTCAGACTTCGTGCG 59 19582225 19582243 AGACGGTCAACTGGAATCG 59 NA Drosophila melanogaster 61 Sec61gamma FBgn0031049 FBtr0074745 1 1 1 185 X 19537484 19537904 GAATTAAAGCGGAGAATCCCA 58 19538051 19538069 GATGAAGCCCATGATGCAG 59 NA InUTR Drosophila melanogaster 61 CG12788 FBgn0031041 FBtr0100291 1 1 1 133 X 19512541 19512559 CTAATCAGCTGTTCCGCTC 58 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ulp1 FBgn0027603 FBtr0074693 1 1 1 81 X 19097797 19097874 AATAGCTGAACAGCAGGCT 59 19097734 19097752 AGACCGGAACATGACTTCC 59 NA Drosophila melanogaster 61 CG7914 FBgn0030995 FBtr0074696 1 1 1 65 X 19087000 19087018 AATACGTACACGAACCGCA 59 19086953 19086971 GTGCAATAGCAACTCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18259 FBgn0030956 FBtr0074661 1 1 1 80 X 18677382 18677400 CGATTTGAGTCTGGACGAG 58 18677258 18677339 TTCGCATTGAACTTTCTGTC 57 NA Nonspecific Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 2 1 2 80 X 18641979 18642090 TGGGCAGTCATCTTAGTGG 59 18641917 18641935 CTCCATCTTCCTGCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 os FBgn0004956 FBtr0074581,FBtr0112847 1 2 2 131 X 18201377 18201395 AACTGGATCGACTATCGCA 58 18201189 18201282 CTGATTGAAGCTCTGCCTG 58 NA Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 2 2 2 81 X 17990414 17990432 CTGCGCGAAATCAAGAGTC 59 17990475 17990557 CGGTTAACAACCACTGATTGG 59 NA Drosophila melanogaster 61 par-6 FBgn0026192 FBtr0074455 1 1 1 80 X 17597748 17598414 TGAAATCGAAGTTCGATGCAG 59 17598455 17598474 ATGCGAATTTGTCGAAGCTC 59 NA Drosophila melanogaster 61 CG12990 FBgn0030859 FBtr0074479 1 1 1 94 X 17563795 17563815 GCCATCTACCTATTGAATCCG 58 17563651 17563740 GCCAGCATTATCATCATGGT 58 NA Drosophila melanogaster 61 beta-Spec FBgn0250788 FBtr0074454 1 1 1 80 X 17562406 17562541 TTGGGATAAGGTATACATGGCT 58 17562579 17562600 TCGGGATTACTCTTATAACCCT 58 NA Drosophila melanogaster 61 CG12432 FBgn0030843 FBtr0074433 3 1 1 99 X 17428177 17428197 CATATCATCTCAAGCAGCTGG 59 17428041 17428116 TCATGATGCAGGTGGACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 2 4 4 294 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198373 17198391 AGCCATTTGAAGTGCACAG 59 NA DesignRelaxed Drosophila melanogaster 61 Rbp2 FBgn0010256 FBtr0074280,FBtr0074279 3 2 3 89 X 16344523 16345314 GCGATAGTAGAGATCGGCC 59 16345367 16345385 GATCCCGATCCTGGTTACG 59 NA Drosophila melanogaster 61 CG13957 FBgn0030739 FBtr0074224 2 1 1 80 X 16210368 16210454 ATAATTGACCAGGGCATAGAC 57 16210495 16210514 GTTCATGTTGTAGGCATACG 57 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 3 3 3 149 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888312 15888393 TTGGTGTAATGGGTCTCGT 58 NA DesignRelaxed Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 l(1)G0136 FBgn0026666 FBtr0074084 3 1 1 167 X 15628384 15628402 TATAAAGGGCACGAACCGA 58 15628633 15629143 CTTTAGGCCAACCATGTCC 58 NA InUTR Drosophila melanogaster 61 CG15646 FBgn0030665 FBtr0074062 1 1 1 60 X 15562761 15562781 GAACAGAATACGCTCAGTTCC 59 15562721 15562739 CATCGATCATACGCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7860 FBgn0030653 FBtr0074045 3 1 1 67 X 15463955 15463973 CACCTATGCGGATAACTGC 58 15464004 15464022 TGTAACGCATGAGGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lsd-2 FBgn0030608 FBtr0110969 3 1 3 253 X 14968203 14968221 TCTACAACCAGGCCAAGAG 59 14966999 14967989 AACATTATCTTCCTCGACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9518 FBgn0030590 FBtr0073983 1 1 1 132 X 14760497 14765029 GAATCGCAATTGGCCTACG 59 14760383 14760404 GAGAATCCTTTGCTTCCTTGTC 59 NA InUTR Drosophila melanogaster 61 CG9413 FBgn0030574 FBtr0073943,FBtr0073944 1 2 2 81 X 14480584 14480602 CTGCTCTTCATATTCGCGG 58 14480461 14480542 TCACCTTGTTCATAAATCTCGG 58 NA Drosophila melanogaster 61 CG13403 FBgn0030544 FBtr0073928 2 1 1 141 X 14085753 14085925 AAGTTCCCGCAATGAACTC 58 14085630 14085648 GAGTAACCGGAGGAGTAGC 59 NA Drosophila melanogaster 61 Ste:CG33243 FBgn0053243 FBtr0300092 1 1 1 110 X 13946055 13946073 TCTGATACACAGCTGGACG 59 13945903 13945981 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG11095 FBgn0030528 FBtr0073827 3 1 1 188 X 13705907 13705925 ATGTCGACCAGTCGATCAC 59 13706074 13706161 GTAGGGATATTTCATTCGTGCC 59 NA Drosophila melanogaster 61 BthD FBgn0030501 FBtr0073806 3 1 1 148 X 13506615 13506633 ATTCTAGGTGACCAGCAGG 58 13506744 13506825 GAAGTTGAAGTTGGTGCCTC 59 NA Drosophila melanogaster 61 comt FBgn0000346 FBtr0073754 2 1 1 107 X 13153747 13153838 AAGAAGACTGTCTCCCAGG 58 13153908 13153927 ATTGAAGACCAGTGATTGGC 58 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 3 4 4 176 X 13098181 13100760 CAAATAGAAGTGCCCGGTG 58 13098023 13098042 GTTGTTAATGCGCAACAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 3 2 2 135 X 11747534 11747552 GAAAGATGACGTAGCGGAG 58 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 2 2 2 81 X 11684959 11684977 ATCCACAGAGGAACTTCCG 59 11685017 11685105 GTTCATCGTTATATGCTGATCCTC 59 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073533,FBtr0073532,FBtr0073534 2 3 3 60 X 11572000 11572019 CAAGATCGATGCCATATTGC 57 11571959 11571980 CAAATTGTTCATAATGGGCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11696 FBgn0030314 FBtr0073512 2 1 1 81 X 11469162 11469183 GACCATGCATCTTAAAGGACAC 59 11469225 11469302 AAACTTGGTGCGGAATGTC 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 3 3 3 237 X 11322866 11322884 CCAGGGACCCTACTATTGC 59 11323197 11323280 GGACACAATGCCAAACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 2 3 3 237 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323198 11323281 TGGACACAATGCCAAACTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG1552 FBgn0030258 FBtr0073397,FBtr0073396 1 2 2 225 X 10947215 10947383 AATAGTGTGCTGCGAACCT 59 10946793 10946811 TCAGGTTGCAATAAACCGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073407 1 1 3 80 X 10766062 10771456 CCTTTGGAGACAATCTTCGT 57 10766001 10766019 GCGAGAATTTAACCACCGA 58 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 3 4 4 136 X 10672153 10672255 ATATTCTCGGAGCTGATCACC 59 10672353 10672371 AAGAGTCCAAAGACACCGG 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071467 2 1 3 100 X 10268304 10268386 GTCGTTCACATAATCGCCA 58 10268222 10268240 CGGGTATCTTGGTTACGGT 59 NA InUTR Drosophila melanogaster 61 c12.1 FBgn0040235 FBtr0071324 3 1 1 66 X 9213064 9213082 CACTGAGCAAGCAGTACTC 58 9212953 9213035 CCAGTCTCCCTGTATTTCAG 57 NA DesignRelaxed Drosophila melanogaster 61 CG12106 FBgn0030100 FBtr0071306 1 1 1 66 X 9088209 9088227 TTCCTTGAAACTGACGCTC 58 9088321 9088339 GTTCTTGGCATACAGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 l(1)G0020 FBgn0027330 FBtr0071280 2 1 1 80 X 8612196 8612216 GACTACTATGCAAGGAAGCAC 58 8612076 8612156 CACTTCCTCGATACCTTTACC 58 NA Drosophila melanogaster 61 CG10555 FBgn0030034 FBtr0071174 2 1 1 124 X 8294598 8294616 ATCCCGTCTATCGGAATGC 59 8294703 8294998 GTTAGGACGCTGTTGATTGG 59 NA Drosophila melanogaster 61 CG15335 FBgn0030001 FBtr0071193 3 1 1 157 X 8021224 8021242 AGTCTGGAGTATACGGTGC 58 8021003 8021104 CTGGCATTTCTATCGTGACC 58 NA Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071114,FBtr0071112,FBtr0071113 3 3 3 60 X 7983694 7983712 ATCCCTTCAAGTCACCGAG 59 7983652 7983670 TCGTCAATGTTCGGATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2256 FBgn0029995 FBtr0301736 2 1 1 180 X 7979062 7979080 TATCCGTGTTCCTTGCCAG 59 7978820 7978918 AGCTCGTCCTTCGTAAACC 59 NA Drosophila melanogaster 61 CG1402 FBgn0029962 FBtr0300019 2 1 1 80 X 7731508 7732738 GTGTTGTATAGAGGATTCTCCA 57 7732779 7732797 GGTGATGTAGTGATCCGTG 57 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 2 2 3 102 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7565000 7565018 TTCGCTGAGGATATGTGCA 59 NA Drosophila melanogaster 61 COQ7 FBgn0029502 FBtr0070963 2 1 1 184 X 6665399 6666272 AGCAATGAATGGAATGCTGAG 59 6666415 6666436 CATGATCGACGCGTATAATCTC 59 NA InUTR Drosophila melanogaster 61 sqh FBgn0003514 FBtr0070877 3 1 1 96 X 6117680 6117698 GAGGAGAATATGGGCGTCC 59 6117529 6117622 GATACATCTCGTCCACATCCT 59 NA Drosophila melanogaster 61 CG5966 FBgn0029831 FBtr0070866 1 1 1 91 X 5885411 5885531 CTTTCGAGAGCTTTAAGGACAC 59 5885583 5885601 GTAATCCTCCTGGCTGTGG 59 NA Drosophila melanogaster 61 CG15464 FBgn0029748 FBtr0299590 3 1 1 60 X 5081418 5081437 ATGGAGGGCATCATACAGTG 59 5081460 5081478 TCCAGATCCCACTTACCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ctp FBgn0011760 FBtr0070705 3 1 4 82 X 4582309 4585674 CATTTACCGTTCCAGTTTACC 57 4585717 4585736 GTGCTTACAACTTCACTGGA 58 NA InUTR Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 2 2 2 103 X 4570357 4570375 AAGCACTACAGTCCTGTGG 59 4568638 4570290 CAGTTGTTGTACGCTCTGC 59 NA Drosophila melanogaster 61 CG15570 FBgn0029697 FBtr0070645 1 1 1 80 X 4114901 4114920 CCACATCTTCATCTTCTGGC 58 4114960 4115069 TGGTATCGCCTTTAACATTCAC 59 NA Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 2 1 1 76 X 3982323 3982342 TGATGCGACTTAAGTCAGAC 57 3982381 3983880 ACTCAATGGAGAAGCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 lva FBgn0029688 FBtr0070626 3 1 1 80 X 3858650 3858668 GACGATCACGAATATGGCG 59 3858519 3858607 GGCGGATACATTCTGTAACG 58 NA Drosophila melanogaster 61 Syx4 FBgn0024980 FBtr0070494 2 1 1 100 X 2636016 2636603 ACTCAATCCGTACACGGAG 59 2635934 2635954 TGAAAGTTCGCAGATTGACAG 59 NA Drosophila melanogaster 61 CG33218 FBgn0053218 FBtr0070400 3 1 1 60 X 2224343 2224362 TCTTTGGTTGGGTAAACTCC 57 2224385 2224460 GGGTTTCTTGATGCTCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 fs(1)K10 FBgn0000810 FBtr0070396 1 1 1 225 X 2137426 2137447 TGATCAATCAGTATCCCATCGA 59 2137633 2138503 TCTGACTTGGCATCCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14053 FBgn0029603 FBtr0070424 2 1 1 60 X 2086826 2086846 CCAGTTTCTACTTCGATTTGC 57 2086786 2086804 CTGTAAACACTGCAGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3587 FBgn0023521 FBtr0070321 1 1 1 142 X 1835082 1835167 CTTATAATGCACCGCTGGG 58 1835273 1835291 CTTCACGGGATTTCTGCTC 58 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070318,FBtr0070320 3 2 3 173 X 1823040 1823060 ATTCCATTCGATGAAGCTGAC 58 1823195 1823286 CTTCAGCTCGAAATCGCTG 59 NA Drosophila melanogaster 61 CG14795 FBgn0025393 FBtr0070285 1 1 1 94 X 1406507 1406525 CAAGCTGCGTAAACAGGTG 59 1406376 1406450 GTTTCTGCGTCTTCACTGTG 59 NA Drosophila melanogaster 61 CG14782 FBgn0025381 FBtr0070259 1 1 1 166 X 1374105 1374123 CTCCTCGACGATAACCTCG 59 1374253 1375058 CTTCCGTTGTTCGTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32812 FBgn0025642 FBtr0070206 2 1 1 86 X 1181959 1182039 CCGATTGAGAATACTTGTAAGTCC 59 1182084 1182102 CTGACGACTTCCTACCGAG 59 NA InUTR Drosophila melanogaster 61 mus81 FBgn0040347 FBtr0070170 1 1 1 60 X 835529 835547 GGTAGTACGCAAGGTTCAG 58 835571 835589 GTCGCATTTATTCTGGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3711 FBgn0040344 FBtr0100527,FBtr0070191 1 2 2 80 X 818648 818788 CGGACAACACAGTCAATATCC 59 818588 818606 AGTAGATGTAGCGCAGCAG 59 NA Drosophila melanogaster 61 l(1)1Bi FBgn0001341 FBtr0070119 2 1 1 81 X 524663 524741 GTCTCCTTTAAACAGCTACCC 58 524784 524802 TCAACGGCTTGTTTAGCTC 58 NA Drosophila melanogaster 61 CG13377 FBgn0261446 FBtr0070106 1 1 1 135 X 152855 152937 CAGTGGCACAAACCATGTC 59 152738 152757 CTTAGAAGCGCATATCGCTG 59 NA Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 2 2 2 80 X 40880 40956 AGCCAGAAAGTACTTCAAAGC 58 40820 40844 GATATTATACCAGAAATGCTCCACG 59 NA Drosophila melanogaster 61 CR40582 FBgn0085751 FBtr0114201 1 1 1 62 U 8446626 8446644 CTGTTCTACGACAGAGGGT 58 8446582 8446600 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40375 FBgn0085733 FBtr0114182 1 1 1 81 U 1362092 1362185 CTTAGCCACATATTAACAGGAAGTC 59 1362035 1362056 CTTTGATACGCTAGTTTCAGCT 58 NA Drosophila melanogaster 61 pho FBgn0002521 FBtr0089204,FBtr0089205 1 2 2 98 4 1194713 1194793 ACAATACAGACTCGACTGGA 58 1194634 1194652 TACAACCCTTATGTGGGCA 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 3 9 9 80 4 1068498 1068518 CCAGGATATCTGTCTCCTGAG 58 1068345 1068457 AAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CG11093 FBgn0039932 FBtr0301336,FBtr0301335 3 2 2 87 4 984849 984867 TCTTCCCACCAGATAGTGG 58 984727 984804 CAGATACTATTCTATTCTTCTCCGG 58 NA Drosophila melanogaster 61 alpha-Est4aPsi FBgn0027934 FBtr0090038 1 1 1 113 3R 3353506 3353608 ATCATTTCGATGCTAACTGGG 58 3353683 3353701 ACTCTGGTCGGGATTTGTC 59 NA Drosophila melanogaster 61 CR33294 FBgn0053294 FBtr0113460 2 1 1 83 3R 19979 19999 CCCATATTCATGAAAGGAGCG 59 20043 20128 TAAGCAAATGTGCGAATCGG 59 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 1 2 3 81 3R 27637149 27637168 AATATCCACAGTACAGCTGC 57 27637032 27637105 GAGGGCAGATTATTGCTCC 58 NA Drosophila melanogaster 61 CG34046 FBgn0054046 FBtr0100101 1 1 1 60 3R 27535055 27535074 CAAGCAAGGCTCATACACTG 59 27535095 27535185 CTTGTAACTCCATAAGCTTGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG1792 FBgn0039860 FBtr0085819 3 1 1 75 3R 27442218 27442237 AGATCGAGGTTCTTACTGGT 57 27442327 27442346 CAGGGTGAGCAAATAAAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34347 FBgn0085376 FBtr0290046,FBtr0301051 1 2 2 81 3R 27166296 27177001 AGATCAAGGATGATTTGCCC 58 27177045 27177063 CCGAAGTATGAGGTCTCGA 58 NA Drosophila melanogaster 61 CG11318 FBgn0039818 FBtr0085739 2 1 1 85 3R 26933506 26933593 AGGACTGAGAAGCAATTATCTC 57 26933442 26933460 TAAAGGCCTTTGAATCCGG 57 NA Drosophila melanogaster 61 CanA1 FBgn0010015 FBtr0085732 1 1 1 80 3R 26869126 26869147 GTCAACATCCTGAACATTTGCT 59 26869187 26869453 TTTCTTGCGTAGCTCTTCCT 59 NA Drosophila melanogaster 61 CG34432 FBgn0085461 FBtr0112733 3 1 1 60 3R 26474920 26474940 ATTTACTGCTCATCCAACCTG 58 26474958 26474980 TCCAAGGTGTAGAATAGGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15529 FBgn0039748 FBtr0085567 2 1 1 156 3R 25978101 25978368 GATTACGTCATTGTGGACGA 58 25978487 25978505 CCTTGAAAGGTCGAACCAG 58 NA Drosophila melanogaster 61 CG15529 FBgn0039748 FBtr0085567 1 1 1 155 3R 25978101 25978368 GATTACGTCATTGTGGACGA 58 25978486 25978504 CTTGAAAGGTCGAACCAGG 58 NA Drosophila melanogaster 61 CG31029 FBgn0051029 FBtr0085585 3 1 1 98 3R 25957432 25957512 CCGGATATAAACCACGGCT 59 25957352 25957373 TCCCAGGGTGAAGATAATATCC 58 NA Drosophila melanogaster 61 ocn FBgn0041102 FBtr0085599 2 1 1 80 3R 25863200 25863219 ACATGCACGGTTTAACTAGG 58 25863085 25863160 TTTCCTCAAAGATTTCCTCGTG 59 NA Drosophila melanogaster 61 CG15817 FBgn0028476 FBtr0300832,FBtr0300833 3 2 2 84 3R 25058455 25058473 GATATTTCTGTGCCGGTGC 59 25058518 25058594 TGCAGGAATTCTGTATGTAGGT 59 NA Drosophila melanogaster 61 Slbp FBgn0041186 FBtr0085409 3 1 1 216 3R 24978761 24978779 TTTCGATCGATGTGAAGCC 58 24978502 24978520 AACTTTACCTCGTTGACGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11880 FBgn0039637 FBtr0085373,FBtr0085372,FBtr0085371 3 3 3 144 3R 24951448 24951535 GACACTCCACAGGTTTGTG 58 24951643 24951661 CCGATTTGGTGCGAATCTG 59 NA Drosophila melanogaster 61 CG14518 FBgn0039621 FBtr0085341 2 1 1 120 3R 24850742 24850817 CCTTATCAATGTGATGCTGTC 57 24850899 24850917 GGCAAACCTTATTCCTGCT 58 NA Drosophila melanogaster 61 CG11828 FBgn0039616 FBtr0300734 2 1 1 80 3R 24749590 24749666 TCGCTATGCATGATTTACCAG 58 24749706 24749726 GATCAGTGTTATCCTCCTTGG 58 NA Drosophila melanogaster 61 CG10011 FBgn0039590 FBtr0085319 1 1 1 130 3R 24435784 24435802 GATGGTCAACTCGAAGCAC 58 24435612 24435690 TCATGTTGGATGCAAGCTG 58 NA Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220,FBtr0085221 1 2 2 60 3R 23526795 23526813 CACTTTCTACGAGCACGAC 58 23526836 23526855 GGGTTCGATCAGGATTTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12879 FBgn0039540 FBtr0085218 2 1 1 94 3R 23520155 23520931 GGAAGAAGTGTGACCATAGC 58 23520986 23521006 GAGATCCCTAAGTTTGGAGCT 59 NA Drosophila melanogaster 61 CG31055 FBgn0051055 FBtr0085244,FBtr0085243,FBtr0085242 1 3 3 124 3R 23512758 23512776 ATGACACCCAATTTGTCGA 57 23512282 23512671 TTGCCGAATCTTACAATCCT 57 NA Drosophila melanogaster 61 CG5590 FBgn0039537 FBtr0085215 1 1 1 60 3R 23503714 23503732 CATCTCGCTGACCAATACC 58 23503756 23503774 GATGTTGTGCATCAGGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193,FBtr0273192 1 2 2 80 3R 23128732 23128754 CGATCTGCTCAACTATAACAAGG 59 23128616 23128696 AACTCGGGATCCTTTAGATACTC 59 NA Drosophila melanogaster 61 TwdlT FBgn0029170 FBtr0085101 1 1 1 197 3R 22874999 22875120 GGATATAGCAACACCGAGGA 59 22875280 22875298 TTGTATCCGGCTTCAGGAC 59 NA InUTR Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 3 1 1 189 3R 22851699 22851787 AATCTTTGCTCTAGCCGCT 59 22851528 22851546 GTAGAAGTTCACGGGAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6283 FBgn0039474 FBtr0085151 2 1 1 61 3R 22846366 22846384 TTCAGCTACGATAAGCCCG 59 22846323 22846341 ATGGACTCTACGTAGTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dei FBgn0008649 FBtr0085009 1 1 1 191 3R 22267458 22273281 GATGAAGTCCAATACGTACGA 57 22273434 22273452 AGTTGAAAGTCAGCCAGGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6073 FBgn0039417 FBtr0085003 2 1 1 122 3R 22013587 22013606 CACGATGTGATCCTAAACGA 57 22013428 22013502 AGGTAGGTACTGCAGTTCG 58 NA Drosophila melanogaster 61 CG14556 FBgn0039413 FBtr0273389 2 1 1 60 3R 21952979 21952998 GAAACTCCGCGAAATCATCC 59 21953021 21953039 AAGATTGCCTTCCATGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dak1 FBgn0028833 FBtr0299798 3 1 2 60 3R 21882130 21882149 TGGAGGATGAGGATGATGAC 58 21882029 21882110 ATGATTTCCAGAACCTTCTGAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 vps2 FBgn0039402 FBtr0084967 3 1 1 99 3R 21878863 21878881 GTTCATGCTGATGAAGGCA 58 21878943 21879022 CTTCGTGACACCTTTCATGG 59 NA Drosophila melanogaster 61 CG5913 FBgn0039385 FBtr0084938 2 1 1 60 3R 21720017 21720037 CTCCAATGAGATCATGGATCG 58 21720057 21720077 CACTTTAAACTGATCCAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5111 FBgn0039343 FBtr0084880 3 1 1 60 3R 21333132 21333153 GGTCAAGATGAATGACACTGAG 59 21333174 21333192 ATCCGATTCCTCATAGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11893 FBgn0039316 FBtr0084827 1 1 1 95 3R 21116673 21116691 ATGATGGTCTGTGGAAGCA 59 21116813 21116831 TATTCGCTTTAACGGCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13663 FBgn0039291 FBtr0084873 2 1 1 80 3R 21040639 21040724 TACAACAGGTACCTACTAAGTTCG 59 21040582 21040602 CCAATTCACTTTCACTGGAGG 59 NA Drosophila melanogaster 61 vig2 FBgn0046214 FBtr0084776,FBtr0084775,FBtr0084777,FBtr0113354 3 4 4 162 3R 20949691 20949711 GAAATAAGGAGTCGAACGGAG 58 20949835 20950327 TCAATTGACTTGACGCCAG 58 NA Drosophila melanogaster 61 CG6432 FBgn0039184 FBtr0084606 2 1 1 82 3R 20164946 20165028 CTACGACGTCAAGATCCTG 57 20165074 20165092 GCAGTGGTAGCTTAAGAGC 58 NA Drosophila melanogaster 61 CG5524 FBgn0039164 FBtr0084573 2 1 1 80 3R 20015070 20015152 GTGTTTACAGATGAAGTGAACC 57 20015011 20015029 ATACTGACGCGATAACCAC 57 NA Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084538 2 1 3 60 3R 19877450 19877468 GAAACGTCCAGAACTCCTC 57 19877573 19877592 GTAGATCCGCAAATCTAGGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13603 FBgn0039135 FBtr0084510 3 1 1 88 3R 19811394 19811591 TGGGAACCACTCAGTTTGG 59 19811324 19811344 GTGGTTGTCGATCAGTTTCAG 59 NA Drosophila melanogaster 61 eIF-3p66 FBgn0040227 FBtr0089622 2 1 1 80 3R 19507160 19507178 AGCGAGGACGAAGATATCC 58 19507220 19507316 TACCAGGACAATATCGCTTCC 59 NA Drosophila melanogaster 61 CG10157 FBgn0039099 FBtr0084435 3 1 1 81 3R 19505391 19505469 CTGGATAACGTTTATAACGCG 57 19505512 19505530 TTTCCTTATACTTGGCGCA 57 NA Drosophila melanogaster 61 CG16723 FBgn0039092 FBtr0084484 2 1 1 80 3R 19421257 19421278 ATCCTTGATGTGCGTTATTGTG 59 19421138 19421216 ACAGCTGGAATACTCCTGG 58 NA Drosophila melanogaster 61 CG10182 FBgn0039091 FBtr0084486 3 1 1 81 3R 19413138 19413227 TTCTCGAACTACACCATTATGC 58 19413078 19413099 TTACCAAGTGCATCACATAAGC 59 NA Drosophila melanogaster 61 sec13 FBgn0024509 FBtr0084409 1 1 1 80 3R 19182667 19183133 ACTAAGCTCTACGAATACAGCA 59 19183174 19183192 CAACACCAATCCGTACTCG 58 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0301491,FBtr0084386,FBtr0084385,FBtr0084384,FBtr0100227 2 6 6 80 3R 19092492 19092511 GTGGATGATTCTCACTGTGG 58 19092376 19092452 AATGACTTCAACATCCTTGGAC 59 NA Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273,FBtr0301382,FBtr0300388 1 3 3 120 3R 19008675 19008693 CAGACACGTTTCAGTTCGC 59 19008777 19009178 TGGTGAAGATGTCCTGCAG 59 NA Drosophila melanogaster 61 CG31457 FBgn0051457 FBtr0084405 1 1 1 80 3R 18952758 18952836 GAGTTACTGGACGATGAACC 58 18952697 18952715 GTTGATCTCAACCATGGGC 58 NA Drosophila melanogaster 61 Rassf FBgn0039055 FBtr0084407 3 1 1 81 3R 18941120 18941139 AGTTGTGCTGAGAAGACCTC 59 18940997 18941076 CAGCTTGGTACGAGAACGA 59 NA Drosophila melanogaster 61 Gr94a FBgn0041225 FBtr0084346 3 1 1 60 3R 18877666 18877687 AGCTATATGAACATTACGGTGG 58 18877705 18877726 GGTCACTGATTATCATTTGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13840 FBgn0039028 FBtr0301686 2 1 1 60 3R 18641572 18641593 ATACGCGAAATTATTATGGCCC 59 18641533 18641553 CCATATGTTGCCAAGTCATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6569 FBgn0038909 FBtr0084156,FBtr0084155 1 2 3 80 3R 17693173 17693191 TCGAAACCATGGAGATGGA 58 17692971 17693129 AGTACCGCTGTATGACCTG 58 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 3 2 2 80 3R 17585746 17585821 ATGGCTCATCAGCTCTATCC 59 17585862 17585882 ATCCGTTCCAAATATCAGCTG 58 NA Drosophila melanogaster 61 Sfp93F FBgn0261060 FBtr0301940 3 1 1 99 3R 17561844 17561921 TGGGCAAAGTTGTAAGTCG 58 17561763 17561784 AAGTAATTACCACTGATCTCCC 57 NA InUTR Drosophila melanogaster 61 CG15497 FBgn0038894 FBtr0084113 3 1 1 96 3R 17491497 17491566 CTACTTCACAACAGGTGTGC 59 17491625 17491643 CAGACCCTGTGATTCACCT 59 NA Drosophila melanogaster 61 E2f FBgn0011766 FBtr0084117,FBtr0084118,FBtr0084119 2 3 3 81 3R 17447412 17448546 ATTGGCTCGGACTACTTCAG 59 17447350 17447368 TCAGCGCATACGGATAGTC 59 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084053 3 1 2 105 3R 17085600 17089752 TCTTTACGAGTCCCATCATCG 59 17089819 17089837 ATCGACCAGAAACCATCGG 59 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084053 1 1 2 104 3R 17085515 17085533 ATCTGCGAGCCATTAAAGG 58 17085599 17089751 GATGATGGGACTCGTAAAGAG 58 NA Drosophila melanogaster 61 Snmp FBgn0260004 FBtr0084027 3 1 1 80 3R 16993568 16993586 AATCCGGATGAGGTATCCG 58 16993440 16993525 CTTGTCCTTCCACTCATCGA 59 NA Drosophila melanogaster 61 rtet FBgn0028468 FBtr0084009 1 1 1 80 3R 16935437 16935751 GCCATATTTAGATTTGCTGCCA 59 16935790 16935810 GAAGTATACCAGGCCAATGGA 59 NA Drosophila melanogaster 61 Dhc93AB FBgn0013812 FBtr0273236 3 1 1 80 3R 16853768 16853848 GACATACGCTTTAGCCGAC 58 16853706 16853724 GATTTCGCGAACTCCATGG 59 NA Drosophila melanogaster 61 CG4159 FBgn0038811 FBtr0083944 3 1 2 94 3R 16418209 16418294 GACTACACCAAGTTCGCCT 59 16418133 16418155 CTCCAGTTTATCTAGAGCCTCTG 59 NA InUTR Drosophila melanogaster 61 Sep2 FBgn0014029 FBtr0083945 3 1 1 117 3R 16413171 16413856 CATGTGTATAGGCGAAACCG 59 16413073 16413091 GTGTGCCTTCAACTTGACG 59 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 3 3 3 81 3R 16378775 16378866 TCTCGTCAAGATCTATCGTGAG 59 16378715 16378733 GATGGGTCCCTTGATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 2 2 2 80 3R 16114816 16114835 ATATACGGATGTGTTGCACC 58 16114878 16114964 GCATCCAGCGTAATATCCG 58 NA Drosophila melanogaster 61 Naam FBgn0051216 FBtr0083786 3 1 1 80 3R 15522367 15523040 CAAGGACACGAGATACTGG 57 15523082 15523102 CCAGTCCAATGAGTAGAAGAC 57 NA Drosophila melanogaster 61 ort FBgn0003011 FBtr0083784 1 1 1 92 3R 15488647 15488771 ATAGAAGGATTGTAACCACCAC 58 15488824 15488842 GTATTATCCGCGACTCCTG 57 NA Drosophila melanogaster 61 cdi FBgn0004876 FBtr0083716 3 1 1 81 3R 14875586 14875607 GCATTTGTAGAATTGTGTCCGA 59 14875466 14875545 TCTTGGCATCGTACAGACAG 59 NA Drosophila melanogaster 61 Cha FBgn0000303 FBtr0089368,FBtr0089367 3 2 2 99 3R 14550958 14550976 AGCTGATCAGGCAGTTCTC 59 14551035 14554515 TAGTAATAGGCCCAGTTATCCTC 58 NA Drosophila melanogaster 61 Gos28 FBgn0044871 FBtr0083661 2 1 1 109 3R 14490712 14490801 ATTTCCAGTCTCATTCAGCG 58 14490873 14490891 TAGTTGAAGGCGTAGAGCA 58 NA Drosophila melanogaster 61 CG31224 FBgn0051224 FBtr0083691 2 1 1 96 3R 14478941 14479023 GGAGTGAGTCGGTTTATGG 57 14478863 14478881 GCCGGATAATAGTCCTGTC 57 NA Drosophila melanogaster 61 CG7691 FBgn0038626 FBtr0083631 3 1 1 84 3R 14386741 14386838 TTCGGATAGGTCCAATCTGC 59 14386885 14386903 ATACTTGCCACACTGTCCA 59 NA Drosophila melanogaster 61 CG31266 FBgn0051266 FBtr0083403,FBtr0300060 3 2 2 166 3R 12959026 12959045 TGCAGAACCAAGATGATGTG 58 12959174 12959257 ATACACATCCGGATAGCCA 58 NA Drosophila melanogaster 61 mRpS33 FBgn0038426 FBtr0083316 2 1 1 103 3R 12262013 12262093 AGTCCATGAAGGTGGTTCG 59 12261928 12261946 CTTCATCAGCAAGTGCGTC 59 NA Nonspecific Drosophila melanogaster 61 Mst89B FBgn0020399 FBtr0083260 2 1 1 86 3R 12092875 12092956 CCTGTTCACATTCCCATAATGG 59 12093003 12093021 TATCACTCGCGTGTCTTCC 59 NA Drosophila melanogaster 61 CG6126 FBgn0038407 FBtr0083278 1 1 1 115 3R 12025000 12025018 ACCTACCAAGCGTACTGTG 59 12024841 12024859 AGATCACTTGGAGCCACTG 59 NA DesignNoJunction Drosophila melanogaster 61 rec FBgn0003227 FBtr0083193 2 1 1 123 3R 11656164 11656183 AAATCCGGTCCTAAACGAGG 59 11650577 11656078 TATCGCAAGAAGTTGCCCT 59 NA Drosophila melanogaster 61 CG9590 FBgn0038360 FBtr0083172 3 1 1 90 3R 11613469 11613546 CGACATAGCCAATCACTGG 58 11613600 11613618 GCTCTTAGCATAGGCTTGC 58 NA Drosophila melanogaster 61 CG4520 FBgn0038355 FBtr0083167 1 1 1 80 3R 11570786 11570899 GTTCAAGACGATACTATGTACACC 59 11570937 11570956 CAGTATGTTCAGGTTGGCAG 59 NA Drosophila melanogaster 61 CG18516 FBgn0038350 FBtr0083150 3 1 1 80 3R 11375248 11375271 GACTATTTACCATGTAGATGGCAC 59 11375131 11375215 GCTATCTTTGTATTCATACCCTGAC 59 NA Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083156 1 1 2 87 3R 11334992 11335010 GCTCCCTGATCTATTGGGA 58 11334274 11334941 TAACCGGAGAGTAGAGCTG 57 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 1 2 2 91 3R 11249454 11249474 AGGTGAATGTCAAGTATGAGG 57 11249257 11249401 GTCCAGGTTCTTCTCTGTG 57 NA Drosophila melanogaster 61 Aats-ser FBgn0021750 FBtr0083086 3 1 1 60 3R 11166914 11166933 GTTCTCTGAATTAGCCCGTG 58 11166953 11166974 AGTGTAGTTACCCAAGTGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 1 2 2 158 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098566 11098584 TTGTTGACAGACCTCCACC 59 NA Drosophila melanogaster 61 CG4334 FBgn0038312 FBtr0290018 3 1 1 106 3R 11095234 11095252 ATCCATGACAGGCACTCTG 59 11095319 11095471 GAAGAAACAGAACCTTTGTGGA 59 NA Drosophila melanogaster 61 CG14857 FBgn0038262 FBtr0082993 2 1 1 80 3R 10629452 10629544 GAAACGAACAATAGACAACTGC 58 10629582 10629603 ATCAAAGGATAGCATGGATTCG 58 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 3 2 3 112 3R 10418461 10418479 AATTCTTGCAACGAGACCC 58 10418554 10418734 GATTTGCTACTTGTTGGCGA 59 NA Drosophila melanogaster 61 CG8066 FBgn0038243 FBtr0082981 2 1 1 115 3R 10394474 10394492 ATTGTAGGCGGGATCAGTC 59 10394313 10394395 TTAAGTGCCTTGTAGCTGG 57 NA DesignRelaxed Drosophila melanogaster 61 CG31313 FBgn0051313 FBtr0082982 3 1 1 90 3R 10392948 10392968 ATGGAGATGACTTATCCAAGG 57 10392720 10392899 TTCACTACCTGATAATTGGGAC 57 NA Drosophila melanogaster 61 CG9616 FBgn0038214 FBtr0300059 2 1 1 129 3R 10071060 10071081 CATGAAAGACAAACAACAGACC 58 10070897 10070970 TGAACCCACAAACAAGTCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Orc2 FBgn0015270 FBtr0082866 2 1 1 182 3R 9791130 9791148 TCAATACGCCCAAGAAACG 58 9791294 9791380 TGGCAATCTGCTTCTTGAC 58 NA Drosophila melanogaster 61 CG14362 FBgn0038186 FBtr0082881 1 1 1 80 3R 9681133 9681152 GGAAGTTCTCCTCGTATCCC 59 9681016 9681092 TCTGACTACGACTTAGTGCTG 59 NA Drosophila melanogaster 61 CG15887 FBgn0038132 FBtr0082776 1 1 1 82 3R 9114365 9114383 TTGGCATGTGATTTGGTGC 59 9114005 9114319 AAAGTACGACTTTCCGCCA 59 NA Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 3 2 2 97 3R 9058558 9058694 TGCTAAGACGGGAAATCCC 59 9058479 9058497 CGATCTTATCGTCGGTGCT 59 NA Drosophila melanogaster 61 CG7966 FBgn0038115 FBtr0082715 1 1 1 80 3R 8875355 8875444 TGGGATAAGCAGTTCTATCCA 58 8875295 8875313 TCCTCCATTCACAGTGTCC 59 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0113229 3 2 3 167 3R 8855867 8855952 TTGCAGAGATTCTTCGCCA 59 8855718 8855736 ATGCTGTTTCTCTTGTCCG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14740 FBgn0037988 FBtr0082552 3 1 1 129 3R 7888463 7888531 TCTTCAAGAACGTTCCATTTCG 59 7888355 7888374 CCGTGCAGACACTTTATACC 58 NA Drosophila melanogaster 61 Tctp FBgn0037874 FBtr0082344 1 1 1 60 3R 7036179 7036197 TGATCTACGAGGTGTACGG 58 7036221 7036239 CCCTCCAGCTTGATATCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm5 FBgn0017577 FBtr0082279 3 1 1 83 3R 6615630 6615648 TAGCAGTCTACACTTCGGG 58 6615695 6615771 CAAAGTTACGCGTTTGAGG 57 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 2 7 8 89 3R 6417178 6419287 GAAGTCGACTCACTGATGG 57 6411627 6411647 GAAGTTATCGCATAACTCGTG 57 NA Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 3 1 1 63 3R 5642489 5642508 TACAACATCGGACAAGTCCT 58 5642373 5642464 CGAATAACAGATGGATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8436 FBgn0037670 FBtr0081977 1 1 1 80 3R 5085048 5085358 GGCTCCTAGGATAAAGATCCA 58 5085400 5085418 ATGATCTCCTTGCCTTCGT 58 NA Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 3 3 3 97 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064804 5064822 TGTTCAGGTTGACGGATCC 59 NA Drosophila melanogaster 61 CG8369 FBgn0040532 FBtr0081920 1 1 1 215 3R 4647842 4648203 TTCTAGCACTGTGCTTGCT 59 4648382 4648457 TCTGCTCGAATGGATCGTC 59 NA DesignRelaxed Drosophila melanogaster 61 hb FBgn0001180 FBtr0081951 3 1 2 163 3R 4520190 4520208 GCAATCATACGCACTGAGC 59 4519762 4519782 TATTCCCGTCGAGATGATGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11741 FBgn0040531 FBtr0112769 3 1 1 60 3R 4354526 4354546 TCACTAGTCTGGATTCAACTG 57 4354486 4354505 CGAAATCCTTGAGGAACTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Poxm FBgn0003129 FBtr0111026 3 1 1 241 3R 4158852 4158872 TCTTCAATCAATTGCCATCGG 59 4146429 4146447 TAGTATGGAGCCCGTTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31473 FBgn0051473 FBtr0081749 3 1 1 61 3R 3638322 3638555 GGGTACAAGAGTTGGTCAC 57 3638577 3638598 CATCACACGAATCATAAACCCA 59 NA DesignNoJunction Drosophila melanogaster 61 pyd3 FBgn0037513 FBtr0081780 2 1 1 88 3R 3573907 3573985 AAGGACACCGAGCTTATCG 59 3573837 3573855 CCCAGAAGTCCTTCACCTG 59 NA Drosophila melanogaster 61 Rtnl2 FBgn0015831 FBtr0081548 2 1 1 60 3R 3355236 3355258 ATCTTACGTTTCTATCCTCACCC 59 3355198 3355218 CCAGATAAAGAGTCTCCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14598 FBgn0037503 FBtr0081534 1 1 1 60 3R 3265581 3266589 TACTTACTCATTGCTTGTGCAG 59 3266607 3266628 TTATTTCTGACACATCAGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 Mst84Da FBgn0004172 FBtr0081584 1 1 1 186 3R 3191665 3191683 ACGTCAACCCGAATTACGT 59 3191888 3191906 CTGGTTTAGCAGCAAGGAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184,FBtr0081572,FBtr0302183 2 3 3 80 3R 3017386 3017461 ACGACTTGTCTAATGGCGT 59 3017502 3017523 CATTGTAGCAAGCAAACAATCG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081613,FBtr0113200,FBtr0081612,FBtr0081614,FBtr0300494,FBtr0300495,FBtr0113199,FBtr0300493,FBtr0081615 2 9 9 153 3R 2924195 2924284 CTTTGACATTGCCTCGCTG 59 2924060 2924078 GTTGCTTGCGATGGTACTC 59 NA Drosophila melanogaster 61 CG10286 FBgn0037439 FBtr0081717 3 1 1 60 3R 2195733 2195753 AGATTATAACCAACCTGGGCT 59 2195775 2195793 TGCTCGCTATCTGTATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15594 FBgn0037421 FBtr0078604,FBtr0078603 3 2 2 60 3R 2113814 2113834 TACAACCATCGCTATAACGAG 57 2113853 2113874 GAGGATTCGGTTTGTAATTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11459 FBgn0037396 FBtr0078623 1 1 1 60 3R 1852683 1852704 AGATGGGACTAAACAAGTTCTC 57 1852644 1852664 GACGAGCGATAATTGAAGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11000 FBgn0037380 FBtr0113195 3 1 1 206 3R 1631990 1632738 AAGCAAATGTTCTGGAACCG 59 1632907 1632925 CAACTGGGACACATTCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG2051 FBgn0037376 FBtr0078670 1 1 1 80 3R 1613835 1613949 GGTGTTACTTCTTGAGCTACG 58 1613775 1613793 ATACGGTGGTGTAACCAGC 59 NA Drosophila melanogaster 61 sec8 FBgn0086685 FBtr0078677 1 1 1 99 3R 1583808 1583885 GATGCTGGAGCAAATCCAG 59 1583727 1583745 ATCAGTTAGGGCCTTGCTG 59 NA Drosophila melanogaster 61 laf FBgn0020280 FBtr0078852 3 1 1 81 3R 704141 704212 TCTGATTAGAAATGTCCCGTC 57 704080 704099 GATTCAGAATCGTCCAGGTC 58 NA InUTR Drosophila melanogaster 61 MP1 FBgn0027930 FBtr0300936,FBtr0078903 2 2 2 91 3R 133771 133997 CGCACAAGAAATCTTTGGGT 59 134049 134069 GCAGTTCGAATAGGTATCCAC 58 NA Drosophila melanogaster 61 CG1092 FBgn0037228 FBtr0078978 1 1 2 73 3R 92882 92900 TTCGACTACGTCTGTAGCC 58 92992 93010 ATAAGATCGCCCATTTGCG 58 NA DesignNoJunction Drosophila melanogaster 61 pncr015:3L FBgn0063083 FBtr0091959 2 1 1 76 3L 7399506 7399524 TCCGTCAGTTAATCGAGCA 58 7399564 7399582 TTTCCAGGGTTCGTGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 alpha-Cat FBgn0010215 FBtr0070038 1 1 1 80 3L 23324106 23327476 GGATAATATGAGGCAATTCGGAC 59 23324048 23324069 GGATCCTTAAGTTCTTGCTGAC 59 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 1 3 3 80 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885714 22885733 GTATGCTAACAGGGTTCCGA 59 NA Drosophila melanogaster 61 CG13239 FBgn0037197 FBtr0078548 3 1 1 60 3L 22854153 22854171 AAAGACAGTTTCTGTGCCA 57 22854195 22854213 GGGAGTTACCGGTAATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32454 FBgn0260481 FBtr0078529 3 1 1 60 3L 22724212 22724230 TCCTTGACTATCCCTTCGC 58 22724253 22724272 GGAATAGAGATTGACAGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078460,FBtr0078461 3 2 2 185 3L 21687569 21687589 ACCCGTTCTGCTATTATCCTC 59 21686810 21687422 GTATAAACATGCCTGGCGC 59 NA Drosophila melanogaster 61 Atox1 FBgn0052446 FBtr0078426 1 1 1 80 3L 21634396 21634415 TTCAAGGTGGAGATGACCTG 59 21634458 21635087 TTTCTCGACCTTATCGCCC 59 NA Nonspecific Drosophila melanogaster 61 CG5664 FBgn0037082 FBtr0078397 3 1 1 101 3L 21433681 21433701 ATACATTCCTGGACATTCTGG 57 21433542 21433618 TGGCAATTAGGATCATGGC 58 NA Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413,FBtr0100592,FBtr0078414 1 3 3 97 3L 21265895 21265915 GGTAACTCAGTTCTACACAGC 58 21265763 21265836 AAACTTTGAGTCCGCTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CSN3 FBgn0027055 FBtr0078269 1 1 1 114 3L 20833659 20833678 GTACTTCTTCGAAGTCTGCA 57 20833493 20833582 ATACGCTATCTTGCCTTCG 57 NA Drosophila melanogaster 61 CG13255 FBgn0040636 FBtr0078263 1 1 1 60 3L 20831515 20831534 TTGGCCTACGTCTTTATGTC 57 20831555 20831575 CCACATTGACCAGTATGAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Six4 FBgn0027364 FBtr0078274,FBtr0078275 1 2 2 94 3L 20784204 20785235 AAATGCTGGTTATCGTGGC 58 20784128 20784146 CCAGCAGGTGATCCTTCTC 59 NA Drosophila melanogaster 61 CG13253 FBgn0037015 FBtr0113182,FBtr0113183 1 2 2 180 3L 20710401 20712119 GTGTAACGAGTCAACATGCA 58 20710240 20710258 GCCCATTTATCGAAAGGCA 58 NA InUTR Drosophila melanogaster 61 CG18281 FBgn0037003 FBtr0078206 1 1 1 60 3L 20493980 20493998 GAGGTGTCCATGATGTTGG 58 20494021 20494040 CGAGAAGGAGATTGGATGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078199 2 1 2 80 3L 20467725 20468670 ACTGGTGGATATTCCTAAGATATCC 59 20468706 20468726 TCGGATAGATTGCTGTACTCC 59 NA Drosophila melanogaster 61 CG14183 FBgn0036931 FBtr0074907 1 1 1 80 3L 20019679 20019754 AAGGAATTCTACGACGCGA 59 20019617 20019637 ATCAATGACAACCAGTACCGT 59 NA Drosophila melanogaster 61 CG42654 FBgn0261506 FBtr0302431 2 1 1 99 3L 19947183 19947255 AGTCTTATCGCAATATGGTTGG 58 19947105 19947126 CATAAGTGCTGAAGCTAAACTG 57 NA Drosophila melanogaster 61 l(3)76BDm FBgn0260655 FBtr0074966 2 1 1 80 3L 19611075 19611388 CAAATGATGCACACTTTCGC 59 19611014 19611035 AGTCCACATCACAGAAATTGAG 58 NA Drosophila melanogaster 61 Shal FBgn0005564 FBtr0112853 3 1 2 86 3L 19565445 19565463 TGACAACTATCGGGACGAG 58 19562900 19565397 ACAAATTCTCGATCCGTTGTC 59 NA Drosophila melanogaster 61 CG18294 FBgn0036873 FBtr0074984 1 1 1 96 3L 19468553 19468628 CATAATGTTCAAATCCGCCGT 59 19468477 19468495 AGGAGCAGTGTAAGCAAGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34256 FBgn0085285 FBtr0302318 2 1 1 85 3L 18982310 18982579 TACTTTGAAGAGCTGGATCTG 57 18982245 18982263 GGTAAGGAACAATGCAGCT 58 NA Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 2 2 2 85 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913034 18913111 ACGATCTTGCGCTTATCCA 59 NA Drosophila melanogaster 61 MED11 FBgn0036811 FBtr0075054 3 1 1 154 3L 18739052 18739072 TAATCCTGTGCATGCAAAGTG 59 18739241 18739261 CTGGGTCAAGTAGTTGATCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16775 FBgn0036767 FBtr0290228 1 1 1 60 3L 17879308 17879329 GTGATGAATCCATCTTTATCGG 57 17879269 17879287 TACTTGACGATGCACATCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7441 FBgn0036763 FBtr0075141 3 1 1 89 3L 17843609 17843628 AAGTCCCGTCTTCTAAAGGA 58 17843679 17843886 ATGAGTGGACTTGTAAAGCA 57 NA Drosophila melanogaster 61 CG7441 FBgn0036763 FBtr0075141 2 1 1 88 3L 17843610 17843628 AGTCCCGTCTTCTAAAGGA 57 17843679 17843886 ATGAGTGGACTTGTAAAGCA 57 NA Drosophila melanogaster 61 Ir75a FBgn0036757 FBtr0273392 1 1 1 80 3L 17810616 17810690 TATTGGAGGAGGCTAGTCG 58 17810554 17810574 ACTCCAATTTAGACTGGTTGC 58 NA Drosophila melanogaster 61 CG32159 FBgn0052159 FBtr0075409 1 1 1 80 3L 16417194 16417281 TCACTTCAAGATGGAGGGAC 59 16417133 16417151 ATCATGCCGAATACTCGGA 58 NA Drosophila melanogaster 61 Cpr72Eb FBgn0036618 FBtr0075383 2 1 1 60 3L 16358191 16358210 CGATCAGTCAGTATCACCAC 57 16358233 16358251 GGTGCCATGTAACCATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4925 FBgn0036614 FBtr0075428 2 1 1 81 3L 16343523 16343602 CACCACGGAGCATAATCAG 58 16343460 16343481 ATCACTGTATGAACCTTCTACG 57 NA Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0110866 3 1 2 94 3L 16336505 16336523 TGATCGGATCACTTTCCCA 58 16336581 16336906 CATAATAGGCACGCTGCTC 58 NA Drosophila melanogaster 61 CG13045 FBgn0036596 FBtr0075472 3 1 1 60 3L 16283389 16283407 CACCACCTCATCATTCTCC 57 16283347 16283366 GTGCTAAATGCTACAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PDCD-5 FBgn0036580 FBtr0075483 3 1 1 81 3L 16224618 16224636 CCCAGGAGGAAATGAAGCA 59 16224498 16224577 CTGACTTTGAGGGTATTAAGTCG 59 NA Drosophila melanogaster 61 CG10516 FBgn0036549 FBtr0075512 2 1 1 135 3L 15962651 15962734 AAGTACCGAGAAACCGACG 59 15962833 15962851 AGTACTCGTCGCACATCTC 59 NA Drosophila melanogaster 61 Pka-C3 FBgn0000489 FBtr0075529,FBtr0075528 2 2 2 82 3L 15921311 15921397 GTCAAACCTCCAACTTCTATGC 59 15921250 15921271 CAGATCGCGATAAACAATTTGC 59 NA Drosophila melanogaster 61 gdl FBgn0001099 FBtr0091757 1 1 1 61 3L 15503331 15503724 GGTTAATGACCAACAATCCAC 57 15503747 15503765 TCTCGGTGACATAGAAGCC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Or71a FBgn0036474 FBtr0075659 2 1 1 80 3L 15070454 15070472 TTAAATCGACCGGTGACCT 58 15070342 15070411 TGCTTGATTCATGGTCTTGG 58 NA Drosophila melanogaster 61 bmm FBgn0036449 FBtr0075699,FBtr0300190 2 2 2 80 3L 14771367 14771448 CACAGAAAGGACGCTTTGAG 59 14771306 14771330 CTTATTGGCTTGTTCGATATAGTCC 59 NA Drosophila melanogaster 61 D FBgn0000411 FBtr0075746 3 1 1 60 3L 14171689 14171710 CAATTATTCGATTGCCCTTGTC 58 14171574 14171592 TGTAGAACGGTCCTCTGTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vps36 FBgn0086785 FBtr0075818 2 1 1 131 3L 13505342 13505362 AAATCCTACCTCATGAGCCTG 59 13505173 13505249 ACCTTGCTCCTCGATAGGA 59 NA Drosophila melanogaster 61 CG33263 FBgn0053263 FBtr0075859 3 1 1 60 3L 13416904 13416922 CTGATTACGCCTCTACAGG 57 13416862 13416883 GTTGTTGTAGAATCAGCTTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 1 3 3 80 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231800 13244263 CCGGTATAATCCTTATTTAAGTGGC 59 NA InUTR Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948,FBtr0075949 2 2 2 80 3L 12763433 12763507 GAGTGCATTACAGCAAACC 57 12763371 12763389 AAATCCTCGTTACGCTGAC 58 NA Drosophila melanogaster 61 mirr FBgn0014343 FBtr0075912,FBtr0075911 3 2 2 106 3L 12698329 12698348 GATCTGAAGGAGAACCTGGT 58 12698417 12700483 ATGCCATAGCTGTTGAACG 58 NA Drosophila melanogaster 61 CG4069 FBgn0036301 FBtr0075965 2 1 1 107 3L 12530132 12530216 TGGGAGAAGCAAATATAGCTG 57 12530045 12530063 AATTGGATCGTGGAGTTGG 57 NA Drosophila melanogaster 61 CG11534 FBgn0046296 FBtr0075995 3 1 1 95 3L 12126029 12126047 CCTCCCAGGGATACAAGTG 59 12126155 12126176 AGTACAATCCACTATAGTCGCA 58 NA DesignNoJunction Drosophila melanogaster 61 RpL10Ab FBgn0036213 FBtr0076032 1 1 2 140 3L 11816325 11816343 TATGAGGGCGTCAATGGAC 59 11816447 11816767 GTGCTTCAACTTGACGGTG 59 NA Drosophila melanogaster 61 CG7512 FBgn0036168 FBtr0302797 3 1 1 80 3L 11511465 11511555 TAAGCAGGATAGATCCCACAG 58 11511597 11511615 CATAATCACACTTGCGGCA 58 NA Drosophila melanogaster 61 CG33500 FBgn0053500 FBtr0076094 3 1 1 79 3L 11501776 11501794 ATTCAGGTTGCGTCATCTG 58 11501837 11501855 GTTGATGCTGCAGTAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 2 1 1 70 3L 9883257 9883275 GATGATCCGCAGTTCTTCG 58 9883309 9883393 CAGCAATCGCCAAGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Ilp2 FBgn0036046 FBtr0076329 2 1 1 87 3L 9792994 9793013 ATAATCCCGTGATTCCACAC 57 9793136 9793154 AACTCCTGGACAAACTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 defl FBgn0036038 FBtr0076403 3 1 1 127 3L 9718103 9718178 CCGCCCAAGATAAATCCCA 59 9718267 9718287 TGTAGAACCAGAGAACTCAGG 58 NA Drosophila melanogaster 61 CG8329 FBgn0036022 FBtr0076387 2 1 1 60 3L 9631379 9631398 CCTGCGAATGAACAATGGAG 59 9631421 9631439 CAGGACCCAATTGTTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or67a FBgn0036009 FBtr0076375 2 1 1 80 3L 9524084 9524164 GAGGTTAATAGATGCTAGCGA 57 9524205 9524224 TTCTTGAATCGTTTGTCGGA 57 NA Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 2 2 2 80 3L 8372406 8372961 CTGTTTGTCATCCCAGCTC 58 8373005 8373023 AGACAACTGCTATTGGCCA 59 NA Drosophila melanogaster 61 CG34461 FBgn0250833 FBtr0112767 2 1 1 172 3L 8319126 8319263 AAGTACTTCGTTGCCATCG 58 8319397 8319417 TTAATGCCGTAGTTGAAGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8005 FBgn0035854 FBtr0076695 1 1 1 80 3L 8191567 8191646 GGGAAATTAACAGAATGCTGGA 59 8191686 8191705 TGAAGTCGTCTGTTTCATGG 58 NA Drosophila melanogaster 61 CG42458 FBgn0259935 FBtr0300248 1 1 1 80 3L 7443664 7445453 CATTCAAAGTCTACAGCAATCC 57 7445493 7445512 CCAATAACTCAGACAGCTCG 58 NA Drosophila melanogaster 61 pst FBgn0035770 FBtr0273399,FBtr0273398 2 2 2 84 3L 7352943 7353033 TAATCTGGGATCTGTTGTCCC 59 7352879 7352897 TTCGGTTCCGGAGAATCAC 59 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692,FBtr0299691,FBtr0299693 3 3 3 140 3L 7322409 7322427 ATCGATTTGCCTATGCCCT 59 7322596 7322614 AGAGTCCTTTCCTATCGCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Dbi FBgn0010387 FBtr0076916,FBtr0076915 1 2 2 69 3L 7125770 7126229 TTTCCGAGCAATTCAACGC 59 7126262 7126280 AACTCGTCATCACTGGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG10075 FBgn0035722 FBtr0076939 3 1 1 141 3L 6950559 6950577 GTTTGGCTACTCCTGATGC 58 6950369 6950454 GTGAAGGATTGTGAGCTCC 58 NA Drosophila melanogaster 61 eIF4E-4 FBgn0035709 FBtr0076963 3 1 1 96 3L 6658183 6658201 GATGATGCGAACAAGTTCG 57 6658025 6658126 GTATGAGTAGCACATCTAACCA 57 NA Drosophila melanogaster 61 CG10226 FBgn0035695 FBtr0077012 1 1 1 80 3L 6232425 6232443 GAAAGAACTCTGGGTCAGG 57 6231872 6232383 GGCATTTGTGAGTATCTTTCC 57 NA Drosophila melanogaster 61 CG32407 FBgn0052407 FBtr0077032 1 1 1 80 3L 5916380 5916461 TTTCTGCTAGATGCTGCCT 59 5916504 5916523 TTTGGTGGTCACCTTAAGGA 58 NA Drosophila melanogaster 61 CG4603 FBgn0035593 FBtr0077164 2 1 1 60 3L 5128223 5128243 ATTATCAATCGCTTTGGCGAG 59 5128265 5128283 CATCGAAGAGCAGGAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13704 FBgn0035583 FBtr0073353 1 1 1 89 3L 4900353 4900425 ATACTTCACTGGCCTTGCT 59 4900478 4900496 ATGAAGTAGAGGGCTCCAC 59 NA Drosophila melanogaster 61 CG11345 FBgn0035546 FBtr0073334 3 1 1 62 3L 4458028 4458111 TGAAAGTCCTTATGCTGGCT 59 4457985 4458003 ACAAATGCGAGACATCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10863 FBgn0027552 FBtr0073171 1 1 1 80 3L 3941674 3941693 CCAATTTCAACTCGGAACAG 57 3941557 3941634 GATGACATTCGATCTGATTGTG 57 NA Drosophila melanogaster 61 CG14966 FBgn0035415 FBtr0073108 1 1 1 60 3L 3197223 3197243 TTCTGTCGAAAGTTCTAGGTC 57 3197183 3197201 GATCGAGATCCCTTGTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 2 3 3 87 3L 2723386 2723471 GCTATAGTGGTGAAGCAGGA 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 CG33233 FBgn0053233 FBtr0301038,FBtr0273190 1 2 2 84 3L 2659738 2659816 CTTAACCATAGGTTATGGGCT 57 2659862 2659880 CATGGACTCAGTTACGGAG 57 NA Drosophila melanogaster 61 CG42357 FBgn0259703 FBtr0299956 3 1 1 81 3L 2020866 2020885 ATTTCTGGACGAAATCTGCT 57 2020749 2020824 AGAGATTCCGGAAAGAAACAG 58 NA Drosophila melanogaster 61 CG1927 FBgn0027547 FBtr0072853 3 1 1 159 3L 1967491 1969607 CCATTAAGAACTGCGAAACG 57 1967351 1967369 TAGTGCTTGGGTACATGGA 58 NA Drosophila melanogaster 61 CG5691 FBgn0035297 FBtr0072854 1 1 1 80 3L 1962563 1962653 GGCTAAATAGCCACTTCAATCTG 59 1962505 1962526 CCTCGCTGATGATTTGATAGAC 59 NA Drosophila melanogaster 61 CG13933 FBgn0035270 FBtr0072792 3 1 1 80 3L 1773470 1773490 CCATTATGGTTCTGCTAGTGC 59 1773357 1773430 TCAGATAGCAGACCTTCATGG 59 NA Drosophila melanogaster 61 CG32313 FBgn0052313 FBtr0072830 2 1 1 80 3L 1545216 1545235 GTATTACAGGTTTACGGCCA 57 1545089 1545175 TATCGCGTTTCCTGTATTCTG 58 NA Drosophila melanogaster 61 CG12091 FBgn0035228 FBtr0072831 1 1 1 60 3L 1535690 1535708 TCAACAGCGAGTTCCTCTC 59 1535648 1535666 CGCGCCTGAATGTTATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 1 2 2 94 3L 1476990 1477071 GTTACTCTGGTGGAGCTGG 59 1476914 1476932 ATGAACATGGAGTCCGAGG 59 NA Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 2 1 1 125 3L 841146 841164 GAGGAAACCGGATATCTGG 57 840988 841057 AATCTTGAAGCAACAGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 ttm2 FBgn0035124 FBtr0072507 1 1 1 60 3L 276279 276297 TTCCACCAAGTTTCACCCT 59 276321 276339 ATTGTCGTTTCCAGACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16896 FBgn0035073 FBtr0072423 1 1 1 112 2R 20761967 20761985 ATTCTGATGTGTCGCTCAC 58 20761814 20761891 TAGGACGTTCCCAGATTCG 58 NA Drosophila melanogaster 61 CG12848 FBgn0040666 FBtr0072437 1 1 1 91 2R 20650488 20650566 GAAATTACGAGATGCGCGT 59 20650415 20650433 CAGAATCTCCTGGAAGGGC 59 NA InUTR Drosophila melanogaster 61 CG13587 FBgn0035031 FBtr0072314 1 1 1 94 2R 20485873 20485894 TGAAGTGTCCTCAGAATAACAC 58 20485949 20486024 GTTCCTTACGACTGTTGGC 58 NA Drosophila melanogaster 61 CG4065 FBgn0034982 FBtr0100398,FBtr0072280 3 2 2 99 2R 20024114 20024137 CATCCAGTTATCAGTTTCTAGAGG 58 20023980 20024056 ATAAAGAAGTTCAGCGCCG 58 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290258 1 1 2 82 2R 19954084 19954102 TGGAATGATCCCAGAATGC 57 19953690 19953792 TTATCCTCAATCTGGAGGGA 57 NA Drosophila melanogaster 61 CG3105 FBgn0034950 FBtr0072160 3 1 1 81 2R 19879125 19879203 TGCGTTAATGAAGCCAAGC 59 19879248 19879266 CGTGGTTACTCACTGAGGT 59 NA Drosophila melanogaster 61 CG13566 FBgn0034942 FBtr0072206 3 1 1 80 2R 19849575 19849593 GCACCTCAAACTATGGCAC 59 19849459 19849535 ATATCAGTAGTCCCTCTATGGTG 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 egl FBgn0000562 FBtr0114586 2 1 1 81 2R 19623883 19623902 CCTCAAGGGCTACTACAAGG 59 19623759 19623841 GGAGTCACTTTGATCTTTGCT 58 NA Drosophila melanogaster 61 CG30409 FBgn0050409 FBtr0072004 3 1 1 86 2R 19242415 19242433 AATGCAACACCATCGAGTC 58 19242481 19242557 AAATCCACACTTTGGTAGCAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Prosbeta5R FBgn0034842 FBtr0072045 3 1 1 99 2R 19197119 19197139 AGAATCCCTACGAACTGATGG 59 19196984 19197002 CCGTGATCGAAATCCATGC 59 NA DesignNoJunction Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 1 3 3 84 2R 18764362 18764449 CAGGAATAAGTCAGTGAATCGC 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 RpL23 FBgn0010078 FBtr0071897 3 1 1 201 2R 18742372 18742976 CAGGAAGAAGGTCATGCCT 59 18743139 18743159 TATAGAGCTTGCATTGGATGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13526 FBgn0034774 FBtr0071878 2 1 1 60 2R 18642864 18642883 AGCATATCGACGAACTGAGG 59 18642906 18642924 AATGTGCCATTCGAGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42566 FBgn0260768 FBtr0301270 2 1 1 80 2R 18550357 18550445 GTGCCTTACCTTCCTTTGG 58 18550489 18550507 AAGATGGACAGTGGTGGTC 59 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 2 2 2 80 2R 18075287 18075364 ATGAACATGAACAACATCTCCC 59 18075403 18075423 GTAGAAGTCGATACAGATGCG 58 NA Drosophila melanogaster 61 CG34040 FBgn0054040 FBtr0100095 2 1 1 80 2R 17720595 17720684 GCAACAATACAGAGGACGC 59 17720533 17720553 TGCCAGATCTAGCAATAGGAC 59 NA Drosophila melanogaster 61 CG10080 FBgn0034641 FBtr0071658 1 1 1 80 2R 17517063 17517083 GAAAGGAGATCCACAAGTTCG 59 17517124 17517205 TGGCAATGATCTCCAGACAG 59 NA Drosophila melanogaster 61 Acox57D-p FBgn0034628 FBtr0071606 2 1 1 82 2R 17276238 17276256 ATCGAGTCCTGGAGAACCT 59 17276298 17276384 GTTAATGAATCTCAGCAGGTGAC 59 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 3 2 3 122 2R 17092792 17092871 CCGCCTTCAAACAGTTCAG 59 17092957 17092975 CATGAGCATACTCCGACGA 59 NA Drosophila melanogaster 61 tud FBgn0003891 FBtr0071582 2 1 1 80 2R 17075375 17075393 TAAACGGAGCATCCCTACG 59 17075435 17075547 AAAGGTTAACGCGAATCTCAG 59 NA Drosophila melanogaster 61 CG9993 FBgn0034553 FBtr0071560 1 1 1 93 2R 16739269 16739288 CCTATCTCACCGAAGTGGTC 59 16739137 16739213 ATATAGGCCGTGGTTTCCG 59 NA Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 1 2 2 93 2R 16231426 16231450 CACACTGAAGATCAATAATGAGGAC 60 16231498 16231577 CTTTCTAATACGATTGCGGGAC 59 NA Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086580 1 1 2 81 2R 15026844 15027206 CTAACTGGTCTGGTGGGTC 59 15027251 15027269 AGATCAACGGTAGGACCAC 58 NA Drosophila melanogaster 61 CG15097 FBgn0034396 FBtr0086631 3 1 2 100 2R 14712066 14712218 ATGTTCAACGACGACATGC 59 14711984 14712002 CCGGTGTAGGTGTAATCGA 58 NA Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970,FBtr0110971 2 2 2 80 2R 14660396 14660474 TATGTCCAGAGCTGTTTCGA 58 14660516 14660535 GTAGACACAGGCGACTATCC 59 NA Drosophila melanogaster 61 CG15073 FBgn0034379 FBtr0086607 3 1 1 80 2R 14594784 14594865 CTATGTGAGAGGAGATTTCCCA 59 14594905 14594924 GCACATGGTACCATAGTTGC 59 NA Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528,FBtr0299527 1 2 2 87 2R 14572325 14572343 CAATGTCTACGAAGCGGAG 58 14572201 14572219 TATGGAAAGATCACGCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 GstE9 FBgn0063491 FBtr0086677 2 1 1 60 2R 14296674 14296696 CTTCAGTATGAGTATAGGCTGGT 59 14296716 14296734 TGAACTCCTTCGTCTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 1 3 3 83 2R 14181662 14181776 ATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 CG14490 FBgn0034281 FBtr0086801 2 1 1 153 2R 13748589 13748608 TACTTTGGTCAGTGGCTAGC 59 13748845 13748863 CAAATTGACCCACGTAGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4996 FBgn0034271 FBtr0086864 1 1 1 82 2R 13627789 13627807 ACCAGGAGATCCTGGAGAG 59 13627848 13627928 GAGAACTTTCTTGAGTTCGTACAG 59 NA Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 2 1 1 194 2R 13553664 13553744 CCAATTCAGCGACGATGAG 59 13553902 13553920 TCCTCCTTTGAGATGACCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4844 FBgn0061354 FBtr0100122,FBtr0100123 1 2 2 113 2R 13394241 13394960 GAACAAATAGACGTCCCATCAC 59 13395034 13395052 CTCCACTGGTGGACATCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086922 1 1 2 83 2R 13348126 13348144 GTTTCGATCGGAAAGCGAC 59 13349518 13349536 GGCTCTTAGGTATTCCGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6550 FBgn0034214 FBtr0086961 3 1 1 82 2R 13313872 13313952 ACATGTTCCTGTACAGAGTGG 59 13313810 13313828 CAACGTGCTCAAAGTCCTG 59 NA Drosophila melanogaster 61 Sip1 FBgn0010620 FBtr0086909 2 1 1 119 2R 13282524 13291407 TTTAAGCGAAGTCAAGATGTCC 59 13291487 13291505 CCATAGCCATCGAAATCGG 58 NA InUTR Drosophila melanogaster 61 mbl FBgn0053197 FBtr0290298,FBtr0086994,FBtr0086992,FBtr0301482,FBtr0086991,FBtr0290299,FBtr0086993 1 7 7 68 2R 13153664 13153682 ACAACTTCAACTTCGCCAG 58 13153711 13162930 GCTGAGTTTACATTATCTTCGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG11395 FBgn0034200 FBtr0086987 3 1 1 94 2R 13024905 13025001 GGACATGGATATCCGAACCA 59 13025058 13025076 AAGACAAAGGGAGGTGGTC 59 NA Drosophila melanogaster 61 CG6984 FBgn0034191 FBtr0086979 2 1 1 114 2R 12979978 12980054 GCAAGTTCTCTACTCCAGGG 59 12980131 12980149 GGAAGACCGGTCATTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 3 4 4 60 2R 12883885 12883903 CCTGGCAGCTTATTCTCAG 58 12883789 12883861 TTGATTCGCGAACAGAAGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 resilin FBgn0034157 FBtr0087025 3 1 2 141 2R 12669055 12669679 GCTGACTACGATAACGATATTGTG 59 12669779 12669797 CATCGGCACCAAGATTCTG 59 NA Drosophila melanogaster 61 CG8303 FBgn0034143 FBtr0273388 3 1 1 80 2R 12483171 12483189 CGGCGTTTCTACTTCAAGG 59 12483039 12483131 GTAGTACAGGACGTTAAAGACCT 59 NA Drosophila melanogaster 61 CG8317 FBgn0034140 FBtr0087122 2 1 1 139 2R 12463781 12463800 AGATGTTTGCGTACACTTGG 58 12462688 12462706 GTTGAACTGATTGGGCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15704 FBgn0034103 FBtr0087136 3 1 1 79 2R 12167641 12167665 CGAAAGTAACTGGAATAAGTAAGGG 59 12167702 12167720 ACCACTCCCAAGTACAGAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 casp FBgn0034068 FBtr0087260,FBtr0087259 1 2 2 80 2R 11912812 11912895 GAGTCCATCAGATTAGTTGCTC 58 11912753 11912772 CACTCGGATCTTTGAAGTCC 58 NA Drosophila melanogaster 61 CG8386 FBgn0034061 FBtr0087264 3 1 1 96 2R 11894885 11894965 CCAGGCACTAATTAAGTATGTGG 59 11894811 11894829 CTTTCCGAACCACTTGGTG 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301313,FBtr0301314,FBtr0100388,FBtr0100387,FBtr0087315 2 6 7 152 2R 11651087 11651161 GCAAGATCAAGGGTGACTG 58 11650953 11650972 TGAACAACTCGTTCCAATCG 58 NA Drosophila melanogaster 61 CG42391 FBgn0259737 FBtr0300042 1 1 1 60 2R 11090178 11090197 ATATGGAAGGCAAATCGTGG 58 11090220 11090238 CTTGTGACGAGATTCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 3 3 3 105 2R 10865419 10865743 GCTCATTAAGGTTCGCCAG 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 CG12853 FBgn0040747 FBtr0087406 1 1 1 112 2R 10821034 10821052 TTTCAAGCGAGCAACATCG 59 10821198 10821216 GCTCCTTTCTTAGCACCCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ave FBgn0050476 FBtr0087439 2 1 1 80 2R 10640182 10640201 GATGTGCTCAAGTGGTATCG 58 10640244 10640465 TCCGGTTATATCGTGCTGG 59 NA Drosophila melanogaster 61 Su(var)2-HP2 FBgn0026427 FBtr0087502,FBtr0087501 1 2 2 80 2R 10498984 10499138 ACAAGTTAAACCAGCTCGAC 58 10498923 10498941 TCTGACTCCGTCTTTGAGC 59 NA Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087574,FBtr0087573 2 2 2 81 2R 10118920 10119004 ACGATACGAAACATTTGCCC 59 10118858 10118876 ACATCCACGTTATCACGCT 59 NA Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 1 2 3 102 2R 9928273 9943274 CATGGTATTCAGGTGTCGG 58 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 arr FBgn0000119 FBtr0087702 1 1 1 84 2R 9342730 9342808 TTAACAAGCTCTGCATCTCG 58 9342665 9342686 CAGATATCCGAGGATTCATCAG 58 NA Drosophila melanogaster 61 CG30059 FBgn0260475 FBtr0087715 2 1 1 216 2R 9301485 9301503 ACTACGAGTCGACCTACCT 59 9301230 9301305 AACCAGTGCTTATCCTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG34315 FBgn0085344 FBtr0300287 2 1 1 60 2R 9093312 9093332 CGCATACTCGTTTATAATCGC 57 9093213 9093293 CATGACAAACATCAAGATGCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13326 FBgn0033794 FBtr0087779 3 1 1 83 2R 9018353 9018426 CCAGCTTCTAATGCGTTCC 59 9018288 9018306 GGAGCCTCGTCGATTAGAG 59 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113079 3 1 4 123 2R 8744164 8744182 AAACGCAACTGTGGTTACC 59 8737633 8737651 AGTTACGTAGGCATTGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0087816 2 1 4 103 2R 8756726 8756744 ATAGGCAGTGCATTCCCTG 59 8756575 8756661 CTCAAAGTCGTCCAGTTTGAC 59 NA InUTR Drosophila melanogaster 61 Or49b FBgn0028963 FBtr0087781 3 1 1 85 2R 8731552 8731632 ATGCTGATTATCGTCAGCG 58 8731681 8731699 TAGAGGGCCAGTATTTGGG 58 NA Drosophila melanogaster 61 Cpr49Ae FBgn0033728 FBtr0087920 1 1 1 88 2R 8291006 8291682 AACTATGCCTATGAGACGGC 59 8291733 8291751 ATCACGTCACTGGAGTCTG 59 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 3 2 2 80 2R 8256397 8256470 ATGATACAGAGGCTCACTCTG 59 8256510 8256530 TTGACTCCGTGTAGTAAACGA 59 NA Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087957 3 1 4 86 2R 8229277 8232034 GCTTAGCGGAGCAATAACAC 59 8229210 8229229 GCTCAGCTACTAGGACTCAG 59 NA InUTR Drosophila melanogaster 61 CG13171 FBgn0033701 FBtr0087995 1 1 1 60 2R 8101575 8101596 GCAATATCGTCAGCTACAAGTC 59 8101617 8101635 CTCAGGAGCAAGTCGTAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8378 FBgn0027495 FBtr0087983 2 1 1 81 2R 8028711 8028786 TACTTCCAGGCTCTAGAGCT 59 8028830 8028848 TAGCATAGCCGATGGACAG 59 NA Drosophila melanogaster 61 rho-7 FBgn0033672 FBtr0088045 1 1 1 80 2R 7875796 7875879 CTTCACGGGAGCATTTACG 59 7875734 7875754 TCTAGGATTAGGCTACGTGTG 58 NA Drosophila melanogaster 61 Gr47b FBgn0041241 FBtr0088127 3 1 1 86 2R 7250563 7250644 ATTTACCTGGTGTACAACGG 57 7250691 7250711 CTGGTGATCTTTGATTTGCTG 57 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299856 2 1 4 76 2R 7182286 7183015 CATACTCATTGTCTTTGCTCTC 57 7182231 7182249 TCTCCTGCTTCTTGAGCTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30016 FBgn0050016 FBtr0088241 1 1 1 80 2R 6762778 6762853 CCACATATTGGATACTTCGGT 57 6762718 6762737 CATTCCTGAATCTCGTCCAG 58 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0301282,FBtr0301281,FBtr0088308,FBtr0088307 1 4 4 103 2R 6360055 6360073 GAACCTCACCGACAAACAG 58 6359711 6359988 GAACCATGATAGGCTGCAG 58 NA Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 2 3 3 80 2R 6338169 6338261 GGAAACTCTACGAATGCGA 57 6338107 6338126 ACGTGGTAACCATTGATGAC 58 NA Drosophila melanogaster 61 JhI-1 FBgn0028426 FBtr0088360 3 1 1 87 2R 6195876 6195952 CAAGGAAAGGTCTGGATCG 57 6195807 6195825 TCCAGAAATCCTGGTACGG 58 NA Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 1 2 2 80 2R 6146885 6146903 AACGCGGATATGGATACGA 58 6146945 6147029 AGTAGCGATCTCTGGATAACC 58 NA Drosophila melanogaster 61 CG30010 FBgn0050010 FBtr0088374 1 1 1 80 2R 5751457 5751528 CATGAGGGAATGCTCTTCC 58 5751569 5751590 GAACTTGAGGAAATCCTTCTCC 58 NA InUTR Drosophila melanogaster 61 tsu FBgn0033378 FBtr0088567 2 1 1 110 2R 4998418 4998436 CATTGACAATGCGGAGGAG 59 4998598 4998617 TTACTGTCGCTTCCAAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787,FBtr0299788 1 2 2 128 2R 4461683 4461701 CAAGAATCTGATCACGGGC 58 4461496 4461593 ACAAAGCACCATGGATAATCG 59 NA Drosophila melanogaster 61 Cyp4ad1 FBgn0033292 FBtr0088760 3 1 1 84 2R 4329275 4329294 TATGACTTCCAGGGATTCCG 59 4329157 4329231 ACAGGATGTTCTGAATTTCAGC 59 NA Drosophila melanogaster 61 CG11635 FBgn0033283 FBtr0088739 3 1 1 61 2R 4246365 4246383 CAAATGACTTGTGCTGCGA 59 4246407 4246426 ATACAGCTCGTCGAATGAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12126 FBgn0033280 FBtr0088801 1 1 1 60 2R 4150498 4150516 GCAGTGCGAAATATCTCCT 57 4150456 4150474 AAACTGATCAAAGGCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14760 FBgn0033277 FBtr0088794 1 1 1 206 2R 4143101 4143587 CTGCGATCATTCATCATCGT 58 4143756 4143774 TATCGTTCTTCGGCTGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG30497 FBgn0050497 FBtr0088932 2 1 3 90 2R 3629422 3665995 GTATCCCATAATGCAGTGCG 59 3629351 3629369 GTCGATCTGGTAGACGTCC 59 NA Drosophila melanogaster 61 dpa FBgn0015929 FBtr0088982 3 1 1 80 2R 3384511 3384529 AGAAGGGCAAAGTTCTCAC 57 3384389 3384468 CGCGTGTGATCATAATTTGG 58 NA Drosophila melanogaster 61 dpa FBgn0015929 FBtr0088982 2 1 1 80 2R 3384511 3384530 AAGAAGGGCAAAGTTCTCAC 58 3384390 3384470 GCGTGTGATCATAATTTGGGA 59 NA Drosophila melanogaster 61 Fmo-2 FBgn0033079 FBtr0086148 1 1 1 80 2R 2532046 2532064 CTAAAGGCCCACATCAAGC 58 2531874 2532002 GTCCCATACGTAGACCTCC 58 NA Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 3 2 2 86 2R 1962622 1962640 AAATAAGAGCGTCAACGCA 58 1962491 1962572 TCATTATCGCTGTCACCCA 58 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 3 2 2 88 2R 1952496 1952515 AAGTCCTACCCTGTGTTCAC 59 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 3 1 1 78 2R 1541421 1541491 AAACCTGATGGTCTACCGC 59 1541533 1541551 AGCAAGATACTTCCGTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 tRNA:CR31669 FBgn0051669 FBtr0077860 1 1 1 60 2L 2013228 2013249 GTTCCATGGTGTAATGGTTAGC 59 2013189 2013208 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31939 FBgn0051939 FBtr0077862 1 1 1 60 2L 2010695 2010716 GTTCCATGGTGTAATGGTTAGC 59 2010656 2010675 GAGATTTGAACTCGGATCGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42647 FBgn0261430 FBtr0302351 2 1 1 86 2L 22441003 22462336 AAAGGAAGGCATTTCGGAC 58 22440935 22440953 TAATGACCATCACCTCCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958,FBtr0085957,FBtr0085956 2 3 3 80 2L 22365255 22365276 CAGTTATACTCGAGATTCCTCC 57 22365314 22365387 AATGGGACATCCTTTAGAAGTC 57 NA Drosophila melanogaster 61 His3:CG33839 FBgn0053839 FBtr0091843 1 1 1 60 2L 21495156 21495174 CGCTCAGGACTTTAAGACG 58 21495198 21495216 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 msb1l FBgn0027949 FBtr0081258 3 1 1 172 2L 19577965 19578049 GCCTTTAACCTTCTTGCAGG 59 19578184 19578202 GAACCTCATCGAGGACCAG 59 NA Drosophila melanogaster 61 TepIV FBgn0041180 FBtr0081254 1 1 1 80 2L 19552892 19552966 TTGTGAAGGCCAAGTTCAC 58 19553008 19553028 ATTCCGGTTCTTGATGATCTG 58 NA Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 3 2 2 106 2L 19417458 19417476 AAATGCTGAAGCTTACGGT 57 19417545 19417633 ACCAAACGTATTTCCTTCGT 57 NA InUTR Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 1 3 3 175 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117968 19117988 GGAAGTAGGCATGAAACTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 Catsup FBgn0002022 FBtr0081143 1 1 1 83 2L 19042316 19042390 CGGATTTGGATATGAGCACC 59 19042436 19042454 TATACAGCAGCACGAAGGG 60 NA Drosophila melanogaster 61 CG17321 FBgn0032719 FBtr0081110 2 1 1 81 2L 18853442 18853544 CGCATACTATTGGTGTTATCCTC 59 18853585 18853603 GTAGAAAGAGGCCCACCTG 59 NA Drosophila melanogaster 61 CG15167 FBgn0032709 FBtr0081101 3 1 1 94 2L 18740440 18740461 CCAGAGATCTACCTATTAGCGT 58 18740515 18740534 TTAAGTTCTGCGGCTTTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 2 2 2 83 2L 18712239 18712257 GTGATCTATGCCAAGACCG 58 18712096 18712192 GTCGCGATAACAGATCACC 58 NA Drosophila melanogaster 61 CG17681 FBgn0032668 FBtr0081038 3 1 1 105 2L 18153616 18153694 TGTTTATACTGGTGCATCGT 57 18153760 18153780 TTAAATCCTCTCGACCAATCC 57 NA Drosophila melanogaster 61 CG6639 FBgn0032638 FBtr0081004 1 1 1 83 2L 17455644 17455736 TTCTACGAAAGCCTGGAGG 59 17455579 17455600 GTGCATTTATTCCGTTTACTCC 58 NA Drosophila melanogaster 61 Gr36a FBgn0045487 FBtr0080962 2 1 1 80 2L 17177644 17177666 AGATGGAACGGATACTAGAAGAG 59 17177703 17177781 GAATGCTTTCAAAGGATTGCTC 59 NA Drosophila melanogaster 61 CG34169 FBgn0085198 FBtr0112360 3 1 1 60 2L 17173748 17173766 TTTACGCCGAAAGTAGGGA 58 17173789 17173808 TTTCTCCTGGCGTAGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15136 FBgn0032625 FBtr0080954 3 1 1 183 2L 17047596 17047778 TGATGAGTTATCTACGTACACC 57 17047434 17047452 TTCGTCAAACTCCAGTTCG 58 NA Drosophila melanogaster 61 CG12288 FBgn0032620 FBtr0080957 1 1 1 91 2L 16901653 16901736 AGGACGAAGAAGGAGTTAAGC 59 16901582 16901602 TACACGTTTGGTGTTGATTGG 59 NA Drosophila melanogaster 61 CG17331 FBgn0032596 FBtr0080936 1 1 1 91 2L 16732007 16732025 TCTACTGGGTATCAAGGGC 58 16731860 16731955 TGTTCTGATCCTCTTTCATCAC 58 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 2 2 2 82 2L 16505875 16505896 TACGATACGAAATCCTATCGCA 59 16505937 16506016 AGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 Tpr2 FBgn0032586 FBtr0080867,FBtr0080866 1 2 2 81 2L 16505876 16505896 ACGATACGAAATCCTATCGCA 59 16505937 16506016 AGACGATATTTCAAACAGGCG 59 NA Drosophila melanogaster 61 CG13243 FBgn0028903 FBtr0080787 2 1 1 174 2L 15852692 15852764 AAAGAATGGATGCTCAAGGAG 58 15852899 15852918 GCCGAAATGATACTCGACAC 59 NA InUTR Drosophila melanogaster 61 CG11864 FBgn0028944 FBtr0080784 3 1 1 101 2L 15613065 15613136 ATGATGCATTTGCCGACAG 59 15612982 15613001 AATCCATTTCAGTAGCTGGC 58 NA Drosophila melanogaster 61 lace FBgn0002524 FBtr0080738 3 1 1 97 2L 15503138 15503158 TTAATGTGGATCCGAAGGAGG 59 15503215 15503299 AATCAGTTTCTTGGATCCAGC 58 NA Drosophila melanogaster 61 Tim17b2 FBgn0020371 FBtr0089699,FBtr0089700 2 2 2 60 2L 15485006 15485025 CCAAATCTCCGGTGATAGGT 59 15485048 15485066 TCCACAATGCTGAACACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15260 FBgn0028850 FBtr0300846 2 1 1 60 2L 15291581 15291601 GGAATTGAACTCCCAATTGTG 57 15291541 15291559 CTGCATCCAATCCTCATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yuri FBgn0045842 FBtr0300932,FBtr0080709,FBtr0300934,FBtr0300935,FBtr0080711,FBtr0080712 1 6 9 284 2L 15263655 15263778 GATGACATGCACACTTGCC 59 15263389 15263407 AACGGTCAGTGTCTCTAGG 58 NA DesignRelaxed Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627,FBtr0080628,FBtr0080626 1 3 3 104 2L 14357444 14357528 CGAGAAGAAATTCATGGCCA 58 14357595 14357613 GTGTCCCAGATCTGTAGCT 58 NA Drosophila melanogaster 61 CG33090 FBgn0028916 FBtr0080624 2 1 1 80 2L 14334506 14334524 AAGAGGATCCAGAATGTGC 57 14334568 14341322 GTAGTAGGCCGCATATCTG 57 NA Drosophila melanogaster 61 CG17341 FBgn0028906 FBtr0080598 2 1 1 86 2L 14157721 14157843 GAGAATACGACTCGACCCA 58 14157892 14157911 CATAGATTCGTTCTCGCAGG 58 NA Drosophila melanogaster 61 CG17341 FBgn0028906 FBtr0080598 1 1 1 85 2L 14157722 14157844 AGAATACGACTCGACCCAC 58 14157892 14157911 CATAGATTCGTTCTCGCAGG 58 NA Drosophila melanogaster 61 CG15639 FBgn0032502 FBtr0080477,FBtr0302306 3 2 2 60 2L 13306199 13306217 GCCCATTGATTGTGTTCCA 58 13306157 13306175 ATTGGCGGTAAATTCTCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16812 FBgn0032488 FBtr0080445 3 1 1 89 2L 13223854 13223872 GAAATCGTTCCCGAATCGG 59 13223923 13224001 AAGTTTGGATACCATTCCGAG 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 3 2 8 91 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458197 12458217 TATCATGAGATGCGACTTGAC 58 NA Drosophila melanogaster 61 CG6388 FBgn0032430 FBtr0080367 2 1 1 84 2L 12429666 12429684 TCGCAAATCGGCATTATCG 59 12429729 12429807 GTCACCAATCATAATAGTGGCT 58 NA Drosophila melanogaster 61 CG5446 FBgn0032429 FBtr0080388 3 1 1 60 2L 12427507 12427525 AACTACTCCCTGAACAGCA 58 12427384 12427484 GTACGTATATGGTCAGCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG31860 FBgn0051860 FBtr0080340 2 1 1 131 2L 12165470 12165490 GATTTCTGCACTTCATTTGGC 58 12165583 12165808 ATGTACACGAGGATGCCTG 59 NA Drosophila melanogaster 61 CG34162 FBgn0085191 FBtr0302420 1 1 1 81 2L 11533379 11533397 CTTATGCGATCTTCCTGGC 59 11533439 11533518 GAAGATGTTACCATTATGCTGC 58 NA Drosophila melanogaster 61 CG31705 FBgn0028490 FBtr0080244,FBtr0080243,FBtr0080242 2 3 3 152 2L 11524687 11524707 AGCCACCTATTATCCACAAGG 59 11524487 11524574 ATAAGACCAGTGCCCAATCC 59 NA Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0301761 1 1 2 80 2L 11076969 11076991 CAGGCAATCTATCCCAATATTCC 59 11076846 11076930 CAAATAGGCGCTGTAAGTGG 59 NA Drosophila melanogaster 61 CG14913 FBgn0032331 FBtr0113035 2 1 2 118 2L 11018328 11018346 TGCAGGATATGTACCAGGG 58 11018496 11018514 AAGAGCTGTGTTATTCGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6724 FBgn0032298 FBtr0080191 3 1 1 82 2L 10768691 10768710 CTGAATCGGCTGATACTGAC 58 10768561 10768646 CTTACCACTGATCCCTGGT 58 NA Drosophila melanogaster 61 CG6495 FBgn0027550 FBtr0080114 3 1 1 91 2L 10762305 10762530 CCAATCGCAAAGTGTTCCC 59 10762585 10762603 CATCGCAGGCATTGTACAC 59 NA Nonspecific Drosophila melanogaster 61 CG6495 FBgn0027550 FBtr0080114 2 1 1 91 2L 10762305 10762530 CCAATCGCAAAGTGTTCCC 59 10762585 10762603 CATCGCAGGCATTGTACAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5366 FBgn0027568 FBtr0080054 1 1 1 80 2L 10358764 10358782 ACGACATCAAGATGCTGAC 58 10358640 10358721 GATCGAGTCTTAGCAGAACC 57 NA Drosophila melanogaster 61 CG33299 FBgn0053299 FBtr0300213 1 1 1 60 2L 9657127 9657145 CGTCGAGGTGATTAAGCAG 58 9657168 9657187 GGTAAACGGAACAGGATAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr30B FBgn0032125 FBtr0079831 1 1 1 186 2L 9542958 9543049 AGTTACCTATTTGTTGTGCCTG 59 9543196 9543214 GATCAGCTCGTAGACACCC 59 NA DesignNoJunction Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664 2 1 4 147 2L 8428059 8428329 CAAATTGAGGCCAGCAGTG 59 8428440 8428458 CAACAAGCACGAATCCCTC 59 NA Drosophila melanogaster 61 emb FBgn0020497 FBtr0079663 1 1 1 80 2L 8406222 8406244 GCACCTTTATTGACGAGATTCTC 59 8406283 8406391 CATAGAACGTGTGAACCTGC 59 NA Drosophila melanogaster 61 RpL36A FBgn0031980 FBtr0079546 2 1 1 64 2L 8042118 8042450 TCAGGAAGAAGGCCAAGAC 59 8042072 8042090 GTATTTGCACTCGGTGCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 chm FBgn0028387 FBtr0079443 2 1 1 80 2L 7413999 7414083 GACTCGAAGGTAAAGCTGG 58 7414127 7414145 ATCATAGTCAGGCACCAGG 58 NA Drosophila melanogaster 61 Wnt6 FBgn0031902 FBtr0079434 2 1 1 247 2L 7343048 7351188 ATCTTAATGCGCGATTCCC 58 7351399 7351417 CTGGGATGTTGATCCTGCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG11289 FBgn0031887 FBtr0289952 1 1 1 80 2L 7068626 7068696 CAAGGATCTACCGTTTGCAC 59 7068739 7068757 TTAAAGCCAGAACCACCGA 59 NA Drosophila melanogaster 61 CG31907 FBgn0051907 FBtr0079425 2 1 1 106 2L 7060757 7060840 ACAGAATCGACCTGTACTCC 59 7060670 7060688 TGGTCCATGGACTAGTGTC 58 NA InUTR Drosophila melanogaster 61 CG9531 FBgn0031817 FBtr0079270 1 1 1 80 2L 6466865 6466884 GATCATCTCCAATCCTCCGT 59 6466750 6466825 TTAAGGTTCTCATACACCACGA 59 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 3 2 2 81 2L 6457103 6457350 AGTTCTTACAGGTCCCTATTATCG 59 6457390 6457408 AACAGTTGGAGCGTAGGTC 59 NA Drosophila melanogaster 61 ppk14 FBgn0031803 FBtr0079252 3 1 1 139 2L 6355667 6355686 ATTGTCTGGCATTCAACGAG 59 6355788 6355904 CACTGTTAGCCAGAAACCC 58 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 2 2 2 87 2L 6097244 6097320 TCCCAAAGACGTACAATCCC 59 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 1 3 3 115 2L 6044339 6044435 CATTCCAGGTTACAAACAGCC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 Acp26Aa FBgn0002855 FBtr0079155 1 1 1 255 2L 5893863 5893883 CACTTCTTCGAAATGAACCAG 57 5893572 5893591 GCGGCAAATCAGAAATATCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Marcal1 FBgn0031655 FBtr0078992 1 1 1 80 2L 4957681 4957760 GAATCCTAGCACTCTTGCC 58 4957802 4957822 ATCAGATAGCGACAAATCACC 58 NA Drosophila melanogaster 61 Jon25Bi FBgn0020906 FBtr0079054,FBtr0100432 1 2 2 64 2L 4954370 4954388 GGATTCACCCGTGTTACCA 59 4954324 4954342 TAGTAGTAAGCAACGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3338 FBgn0031598 FBtr0077462 3 1 1 129 2L 4385254 4385333 GACATCGAGGAAATCAAGAATCTC 59 4385148 4385166 CCAAACGGTGTTGGTTCTG 59 NA Drosophila melanogaster 61 CG31959 FBgn0051959 FBtr0077488 2 1 1 89 2L 3758912 3758992 TATCCACGCTACCAGAACAG 59 3759043 3759062 ACCAGTACTCAGAATCGAGG 58 NA Drosophila melanogaster 61 Ptpa FBgn0016698 FBtr0077589 1 1 1 94 2L 3377117 3377190 CAAGCAGCAGGTAAACTGC 60 3377248 3377266 ATTAAATCGTGGAAGGCGC 59 NA Drosophila melanogaster 61 NTPase FBgn0024947 FBtr0077680,FBtr0077682,FBtr0077683,FBtr0077681 2 4 4 224 2L 2882502 2882700 TTGTCTTTGGCTTCGTCTC 58 2882296 2882314 GATTATCCGCGAAGGAGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG15400 FBgn0031463 FBtr0113017 3 1 1 85 2L 2815661 2815680 ATAGTGCACATTCTTTCGGA 57 2815536 2815613 AAACTCAAGCGTTCCTGAG 58 NA Drosophila melanogaster 61 CG15398 FBgn0031446 FBtr0300986 2 1 1 111 2L 2695978 2696055 CAAACCCTTCTACTGCTTGG 58 2695886 2695904 GACGAACAAGGCCATATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 1 1 1 60 2L 2652060 2652138 GTTTGCAATGGAAAGCGAC 58 2652018 2652038 CACTCTCCGTAATTGGATTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9886 FBgn0031428 FBtr0077770 1 1 1 80 2L 2421962 2421980 CCCTAGAGGACCACATGAG 58 2422021 2422098 CATGGCCAGAAACTTTAATGAC 58 NA Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077788 3 1 2 90 2L 2416371 2416445 CTTGTGCAAGTCGTATCCA 57 2416299 2416319 AACTCCATGTTCATCTTGTGG 58 NA Drosophila melanogaster 61 CG15390 FBgn0031419 FBtr0077764 2 1 1 61 2L 2374809 2374887 CTTACATCACATAAGGCACTTGG 60 2374905 2374926 CGATGTGAATTTGTTCAAGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31681 FBgn0051681 FBtr0077802 3 1 1 60 2L 2286546 2286567 AGGTGTTAAAGGTGCTAAAGAC 58 2286507 2286527 GGATTGTAAAGTTTAGGCACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15387 FBgn0031403 FBtr0077841 2 1 2 87 2L 2226170 2226485 GCTTCTAGAGTGATACTGCC 57 2226102 2226120 GCCTCTGAGAGTTTCTTCG 58 NA InUTR Drosophila melanogaster 61 CG42371 FBgn0259717 FBtr0299970 3 1 1 81 2L 2217067 2217085 ACACTGTTTGTCCTCGAGG 59 2216951 2217023 GACGAAACTCTCGATTCGTG 59 NA Nonspecific Drosophila melanogaster 61 CG4259 FBgn0031389 FBtr0077854 1 1 1 95 2L 2129061 2129143 ACTACAATCAGATACGACGTG 57 2128986 2129004 GAAACAGCCAATCCCTCTG 58 NA Drosophila melanogaster 61 Gr22b FBgn0045500 FBtr0100188 2 1 1 84 2L 1792311 1792329 GACGAAACCGCGATAATCC 59 1792194 1792264 AAGCGAACTCGTTAACACTC 58 NA Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 2 1 1 105 2L 1755387 1755469 GTTTGAATGAATTCGCATGGC 59 1755302 1755323 CTGGTGATGATCATTTGAAAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31924 FBgn0051924 FBtr0077945,FBtr0077946 2 2 2 60 2L 1354589 1354608 GATTCATTCGACTGATGCCC 59 1354548 1354567 ATGTTGAACGCTTTGAGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9104 FBgn0030800 FBtr0074348 3 1 1 87 X 16778028 16778108 ATAAGCTGCCAGGTTCCTG 59 16777959 16777977 GTTGAAGATGCTGCTTGGG 59 NA Drosophila melanogaster 61 p24-1 FBgn0030341 FBtr0073604 2 1 1 71 X 11746493 11746514 GGCGATATCGATAGCATATCAC 58 11746362 11746461 TATTCTTCCAGCAGCCTCC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 spri FBgn0085443 FBtr0112690 2 1 4 85 X 10386359 10386547 GTGAATTAATAGCTGGTCACCC 59 10386295 10386313 TTGAAGGGTGTATGCCCTC 59 NA Drosophila melanogaster 61 l(1)G0289 FBgn0028331 FBtr0071470 2 1 1 104 X 10252658 10252740 CGTTTACGTGCCTATGGTG 59 10252514 10252532 TATGAATGGCGGTAGCCTC 59 NA Drosophila melanogaster 61 CG32750 FBgn0052750 FBtr0070881 2 1 1 134 X 6089850 6089868 TTCGGTCATTTCATCTGCT 57 6089676 6089752 AAATTGAGAGGCTGTGAGG 57 NA Drosophila melanogaster 61 CG12239 FBgn0029810 FBtr0070814 3 1 1 284 X 5687900 5687918 TGATCTTCGCAGGGAAGAG 59 5688166 5688245 AGTGCATGACCAAATCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 GlcAT-I FBgn0066114 FBtr0070644 3 1 1 81 X 4025459 4025478 CACGTTACCCACGATTTACG 59 4025519 4025603 GAGGTGAGATAGTCTGGTTAGC 59 NA Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0100272 1 1 2 60 X 2499641 2499659 GATCCCTTCCTCTTCCCAC 59 2499683 2499701 TTAGCGAACGACTTACCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11663 FBgn0029539 FBtr0070164 3 1 1 162 X 788542 788649 GAATCCTACACTATGGCAAATCC 59 788770 788789 TTATCTGGGTTTGCATCTGC 58 NA InUTR Drosophila melanogaster 61 CG3777 FBgn0024989 FBtr0070066,FBtr0070068,FBtr0070067 3 3 3 99 X 241723 242116 CAAACAAGACTGGTAGAAATCG 57 242176 242194 GCTACTGATGTGGCATCTG 58 NA Drosophila melanogaster 61 CG42623 FBgn0261338 FBtr0302254 3 1 1 83 U 383636 383656 ATTCCAACGTCGCATATACAC 59 383698 398749 CATGTATTTACAGAGTTCCCGA 58 NA Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 1 1 1 109 3R 25631518 25631536 GAGTGTCTTCAGAGGCAGG 59 25631368 25631447 TTCTCATGTATTGCTTGCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 mrt FBgn0039507 FBtr0085174 1 1 1 80 3R 23104818 23104915 GAGCCAATTGATATAGGCTATGAG 59 23104761 23104779 CTCGTAGTCGAACGACTCC 59 NA Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0300475 1 1 2 134 3R 19932654 19932672 TGGTTGATACGACTACGCA 58 19927760 19932558 GCTTGGATTCGGATATTTCGT 58 NA Drosophila melanogaster 61 Glut3 FBgn0015230 FBtr0083340 1 1 1 60 3R 12614999 12615020 TTTCTATGGCCTCAATATGCTG 58 12615038 12615059 TAAGATCAATCCAAACTCTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 2 2 2 159 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098565 11098583 GTTGTTGACAGACCTCCAC 58 NA Drosophila melanogaster 61 scpr-B FBgn0037888 FBtr0082362 3 1 1 63 3R 7066236 7066254 GAGCCGAGACAGAGTACAC 59 7066191 7066209 TCAGCAAACCAGTTCTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or85f FBgn0037685 FBtr0082028 3 1 1 81 3R 5224935 5225005 CAAGTTCTCGACTTGAGCG 59 5225047 5225068 ACCTCTTGTACGCTATAGAAGC 59 NA Drosophila melanogaster 61 Atu FBgn0019637 FBtr0078704 3 1 1 156 3R 1440189 1440308 AGGATGTGGGAAAGAAAGCT 59 1440426 1440445 ATAGAACGACTGTGGGAGTG 59 NA Drosophila melanogaster 61 CG1427 FBgn0037347 FBtr0273377 1 1 1 80 3R 1427573 1427642 GTATAGCCTGCAAACTCGT 57 1427685 1427704 GTGCCTCTAGTAAGTCTCCA 58 NA Drosophila melanogaster 61 Cpr76Bd FBgn0036881 FBtr0113181 2 1 1 71 3L 19530152 19530170 GTAACTCAACATGCCGTCC 58 19530205 19530285 ATATCGAGGATGGGCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 3 2 2 232 3L 16134356 16134436 CAGCTATCAGCAATCGGAG 58 16134142 16134162 GCGAGAAGAACTTGGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 Z600 FBgn0004052 FBtr0075549 1 1 1 60 3L 15502430 15502451 GAATCGCATGTACACTTACGAG 59 15502472 15502490 GTTCAAAGATTTGCGAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34382 FBgn0085411 FBtr0112620 2 1 1 95 3L 9875637 9875655 CCTATCAACTGCCATTGCC 59 9875714 9875793 GAATCACTTGGTAGGGCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG32407 FBgn0052407 FBtr0077032 2 1 1 90 3L 5915755 5915773 GATCAGGATCCGACTCCAG 59 5915827 5915918 GATGGAATGGTTCTGCTGG 58 NA Drosophila melanogaster 61 VhaM9.7-1 FBgn0028664 FBtr0073256 1 1 1 60 3L 4186737 4186758 TCCTAACAATCGTCTTCTTCAC 58 4186698 4186716 AGAATGGGTCCGTACTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15087 FBgn0034380 FBtr0086647 2 1 1 80 2R 14596613 14596686 GTTCACATACTGATTGCTCTGG 59 14596554 14596572 CTCAGTTTCGTGGGTAAGC 58 NA Drosophila melanogaster 61 ana3 FBgn0033718 FBtr0087904 1 1 1 97 2R 8236021 8236100 AGTTGATGAGCTACTCTCAGC 59 8236159 8236177 TATGTACAAGCAGTCCCGC 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 3 10 10 139 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743399 5743417 GCATCTTATCCTGCTCCGA 59 NA Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503,FBtr0301276,FBtr0081504 1 3 3 80 2L 21137683 21137770 TGAACAGATCTTGGACAAGG 57 21137622 21137641 TCGTCCTTATCAAACGACAG 57 NA Drosophila melanogaster 61 CG33510 FBgn0053510 FBtr0300360 2 1 1 82 2L 21083660 21083679 CGTTGAGTTCAGAAAGTGGC 59 21083533 21083616 CTAAGACAGCTCTTAGGCCC 59 NA Drosophila melanogaster 61 ham FBgn0045852 FBtr0081123 2 1 1 80 2L 18764903 18764921 AGCAGGACGATATGAAGCA 58 18764633 18764863 CAATGGATTTCCTATCATCCTCG 59 NA Drosophila melanogaster 61 CG10333 FBgn0032690 FBtr0081072 1 1 1 88 2L 18607052 18607070 TAGGGAGAAGGAAAGACGC 59 18607185 18607203 TATCCCTAGGCCTTTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299782,FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 3 6 6 119 2L 11818480 11818604 TCAAGAACCTGGACGACTG 59 11818379 11818397 TGAACTTGTGAATCGAGCC 58 NA DesignNoJunction Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080157,FBtr0080156 2 2 2 60 2L 11011787 11011805 ATTTCGAGGTGAAGCATGG 58 11011829 11011847 GGATAGAAGATACGCTCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bib FBgn0000180 FBtr0079929 2 1 1 91 2L 9987720 9992266 CTTTATGGCGTAACTGTGCC 59 9992320 9992338 ACACCGAATCTTTCCCAGG 59 NA Drosophila melanogaster 61 CG13794 FBgn0031936 FBtr0079507 1 1 1 86 2L 7721174 7721193 GGATCATTTCCTTCGGACAG 58 7720966 7721128 CAATGCCTTCATTGTAGTAGTG 57 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 2 3 3 88 2L 6095077 6095095 CTGATCGAGCACTTCAAGC 59 6095144 6095249 GGTAGAGCGGATTCATATTTGG 59 NA Drosophila melanogaster 61 CG15432 FBgn0031603 FBtr0077438 1 1 1 60 2L 4442738 4442756 AAGCGAATCATGGACAAGG 58 4442780 4442798 GCTCGTTGAATTTCTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8837 FBgn0031520 FBtr0077583 3 1 1 89 2L 3322748 3322827 ATGATAGAGGCATTCAATGCG 59 3322878 3322896 CACGAATATTGAGGCTCCG 58 NA Drosophila melanogaster 61 cpb FBgn0011570 FBtr0077881 1 1 1 107 2L 1705025 1705043 TTTAAGATCGGCCCTGCTC 59 1705114 1705417 GTCCATCTGCATTTCCGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0100469,FBtr0078012 3 3 3 61 2L 823529 823551 CGATATGAAGGTCTACATGATGG 58 823639 823657 GATCAGCCGATCTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG3662 FBgn0031285 FBtr0301908,FBtr0078012 2 2 3 65 2L 821611 821629 CATGAACCTCAACGACGAG 58 821658 822874 CTGTAAGCAACCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Gr21a FBgn0041250 FBtr0078006 1 1 1 103 2L 782432 782503 CTACAAGGAGGTGGGTCTG 59 782570 782588 AGTCAAGTCCGACCTTTCG 59 NA Drosophila melanogaster 61 lectin-21Ca FBgn0040107 FBtr0077998 2 1 1 60 2L 625347 625366 CTCAGGTGCAAATTCATCAG 57 625386 625407 TTTCCATCCATCATTTCTCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11555 FBgn0086856 FBtr0078128 3 1 1 60 2L 274575 274596 GAGATAATGCACATCCTTATCG 57 274615 274635 CCTTTCTGAAACGGATTTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beta4GalT7 FBgn0039258 FBtr0084755 3 1 1 146 3R 20849864 20849952 ACATTCAGCCATATTCACAACC 59 20850058 20850077 AATGAGCATCTCATGCACCT 59 NA Drosophila melanogaster 61 Sfp24C1 FBgn0259956 FBtr0300302 1 1 1 86 2L 3700751 3700828 GGATATGGAAATTCTGTCTGCA 59 3700872 3700893 GGAAGCTACGAAAGTAAATCCT 58 NA Drosophila melanogaster 61 CG17575 FBgn0250842 FBtr0087819 2 1 1 266 2R 8733386 8733469 CAATAACAGCAAGTGCATTGC 59 8733140 8733158 TAGATCTCGTTGACGGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7759 FBgn0033633 FBtr0088133,FBtr0088134 1 2 2 80 2R 7294481 7294501 AAGCCCTTGGATTATTTCCTC 58 7294543 7294621 CTTGGGCAGACTGATTAGC 58 NA Drosophila melanogaster 61 CG7367 FBgn0031976 FBtr0301128 2 1 2 60 2L 8028173 8028659 CCTTAGTTGTTGGATGGTTGG 59 8028133 8028156 GTTGTAATCCTCCTGATTTAGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31650 FBgn0031673 FBtr0301906,FBtr0079034,FBtr0079035,FBtr0301907,FBtr0079033,FBtr0301905 3 6 6 135 2L 5041823 5042495 CATCGGCAACACGAAAGAG 59 5041706 5041724 CCAGGCTTTCAACTCATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7864 FBgn0035233 FBtr0072743 2 1 1 89 3L 1559025 1559043 ATAACCTTCAGACCCTCGG 58 1559094 1559168 TCAGTTGTAACAATCTGCTGG 58 NA Drosophila melanogaster 61 CG6839 FBgn0036831 FBtr0075069 1 1 1 81 3L 18910783 18910801 GAGGATGACGGGATCTTCG 59 18910844 18911218 GAATAGTAACACTGCAGGCTC 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 3 3 3 117 X 21003861 21003879 CATTCGTAACCGACGAACG 59 21003957 21004217 TTACTTCGTATGATGTCGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 cactin FBgn0031114 FBtr0077305 2 1 1 60 X 20295707 20295725 ACTCCAATCTCACCTCCAC 58 20295747 20295767 TTTGATAGTCCCTCTACCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 1 2 2 89 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291667 20291685 CTTCCTTCTCTGCATCGTG 58 NA Drosophila melanogaster 61 Sdic3 FBgn0052823 FBtr0089465 2 1 1 60 X 20085415 20085812 AGTGAAGAAGGAGGTCAACG 59 20085374 20085394 CTCCGACAGTATGATCATCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9570 FBgn0031085 FBtr0070002 2 1 1 66 X 19946056 19946074 AATCCTGATGAAGTGCAGC 58 19946104 19946122 GTTAGCAATCAGTGGTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 3 4 4 80 X 19465918 19466009 TCGAGAATAAGATGGACGCC 59 19465857 19465877 TATGCTTCTCGTGTTTCATGC 59 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 2 2 2 87 X 16692801 16692819 CTGGAGGATCCGAATGGAC 59 16692667 16692685 TAGAACTGCACCCAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9917 FBgn0030740 FBtr0074237 3 1 1 60 X 16216189 16216207 TGACAATCAGAAATCGCCG 58 16216147 16216165 ATGGAATACCCGACTCCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ste:CG33246 FBgn0053246 FBtr0300095 3 1 1 110 X 13942248 13942266 TCTGATACACAGCTGGACG 59 13942096 13942174 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG11164 FBgn0030507 FBtr0073809 1 1 1 93 X 13562473 13562563 TGCGCAAAGAGCAATATCG 59 13562620 13562638 TTTAAGGTTCCCTGGGTCG 59 NA Drosophila melanogaster 61 CG34348 FBgn0085377 FBtr0112557 2 1 1 81 X 11237873 11237892 CAAGTTTCGGACGTATCTGG 58 11237936 11238017 CGTAGCCACCTTGATTTGC 59 NA Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071412,FBtr0071411 1 2 4 82 X 9893265 9893283 TCATTGATAGCCGATCGCA 59 9893329 9898438 TCAGTGGCTCCATTCTTGG 59 NA Drosophila melanogaster 61 CBP FBgn0026144 FBtr0071053,FBtr0071052 1 2 2 117 X 7235526 7235615 ACTTGTTTAAGGCTGTGGAC 58 7235695 7235713 ATCACAGCGAATGAAACGG 58 NA Drosophila melanogaster 61 nullo FBgn0004143 FBtr0299565 3 1 1 72 X 6943723 6943741 CATCCAGAGACTCGTCCTC 59 6943776 6943795 CTTGGAGCGCTTGTTTAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5937 FBgn0029834 FBtr0112952,FBtr0070868 2 2 2 60 X 5938617 5938638 GTATGCTATGTGTTTGGATGGT 58 5938727 5938747 CAGATTCAAACTGTTGCTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG15770 FBgn0029803 FBtr0070811 3 1 1 60 X 5659079 5659097 CCCGGAGTCCATATTCCAG 59 5659121 5659139 CACGGATCGCATATCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SIP3 FBgn0061196 FBtr0070727 2 1 1 60 X 4854883 4854903 GATCGAGTACCAGATGATGAG 57 4854843 4854863 ATGGCAGTATTTCCATCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112948 2 1 5 129 X 4824090 4832017 CTCAACCAAGCACAAATGC 58 4823979 4824000 GTTCACTGTTATTGTGCTAGTG 57 NA InUTR Drosophila melanogaster 61 CG2924 FBgn0023528 FBtr0300793,FBtr0070412 3 2 2 80 X 2160696 2160863 GTACAAGCAAGAAGGACGAC 59 2160635 2160658 GATAGTCTTGTCTCTGACTTTGAC 59 NA Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 3 1 1 150 X 1587208 1587226 AAGTTGAACGCCGAAAGTG 59 1587340 1587419 AATCGAGTGTTGTCCACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG11409 FBgn0024366 FBtr0070238 2 1 1 170 X 1227556 1227574 GATACTAGCCAACGATCCG 57 1227338 1227356 TTGTTGTCCGTGTTGAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Appl FBgn0000108 FBtr0070109 1 1 1 80 X 466092 466190 GTAAGTCAGAAACGCCTTGAG 59 466232 466250 CTTCTCCTCGAGATCGGAC 59 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 1 4 4 121 U 1092307 1092326 CCAGATCTAAGTTGCGATCC 58 1092152 1092226 TAAAGAGAATTCACTGCTCGAC 58 NA Drosophila melanogaster 61 CG42622 FBgn0261337 FBtr0302252 3 1 1 60 U 549181 549201 CATTAAGAGAAATGAAGCGCG 58 549222 549241 TGCTCATAGATTCCATCACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40204 FBgn0058204 FBtr0302255 3 1 1 63 U 497481 497502 AACTATCACAAGATCCTGTCGA 59 497526 497544 TTCACAACGCTGTGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arf102F FBgn0013749 FBtr0089192 1 1 1 80 4 1145314 1145402 TACAGAACATGCTCCAGGAG 59 1145445 1145463 TTGCATTCGGTAGGTCCTG 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 1 3 3 70 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645221 645240 CTGGTTACTTCTTAGGCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Or-aca3 FBgn0082923 FBtr0113586 1 1 1 60 3R 23749653 23749671 GCAACTGGCTACTCTTCTG 58 23749695 23749713 TTTATCTGGCAACGCAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3571 FBgn0082954 FBtr0113580 3 1 1 60 3R 1423421 1423440 ACTCAATGATCCAGTTGTGC 58 1423380 1423400 CTCCGTCGAACTTTCTTACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2h FBgn0039801 FBtr0085721 1 1 2 127 3R 26571772 26571790 ATGAGCTTCGACTTTACGC 58 26571582 26571681 ATGGTGTATGGATTGCAGG 57 NA Drosophila melanogaster 61 CG34299 FBgn0085328 FBtr0112495 1 1 1 122 3R 26075460 26075478 AAGCGCTCTTCGAATTTGG 59 26075623 26075992 CTAAATTGGATTTGCGTTTGGG 59 NA Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 1 1 1 61 3R 22825495 22825576 GGACGGATGTATTACGAAGTG 58 22825599 22825617 AAAGATGGACGCATCAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 2 2 2 122 3R 22702880 22703272 GCACTACAGAAACTTTGTCGT 59 22702778 22702796 TAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 malpha FBgn0002732 FBtr0084956 2 1 1 60 3R 21836821 21836840 TAGAATCCGTCGACAATCTG 57 21836863 21836881 TCGATCTCGGCATAGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HLHmgamma FBgn0002735 FBtr0084955 2 1 1 62 3R 21825787 21825805 TATGGTTGCCACCTTGGAG 59 21825831 21825849 AGGATATCGGCTTTCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tobi FBgn0261575 FBtr0084847 1 1 1 86 3R 21170772 21170851 GCAGTCTATCTATGATGAGTTCC 58 21170708 21170726 TAAATGTCTCGCTTGGTGG 57 NA Drosophila melanogaster 61 asp FBgn0000140 FBtr0084692 2 1 1 91 3R 20585536 20585554 GTGCGACAAAGACAGTGAG 59 20585608 20585691 AGTCGTGAATGATCTTTCGC 58 NA Drosophila melanogaster 61 CG17786 FBgn0039167 FBtr0084572 2 1 1 60 3R 20043411 20043429 ACCGAAGATGTCCAATCCG 59 20043369 20043388 TAGATGGTAAGATGCTCCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 3 5 5 101 3R 19824625 19824644 ATAAGGAGCGTGATCTCGAG 59 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 klg FBgn0017590 FBtr0084337 3 1 1 83 3R 18784143 18784161 AGCTACAATCTGACCTGGA 57 18784208 18785280 CTCATTCATCTGCACTCGA 57 NA Drosophila melanogaster 61 CG12278 FBgn0038847 FBtr0084003 3 1 1 60 3R 16869961 16869980 CCAAGAAATCAGCACTCTGG 59 16869998 16870021 ACACTGTAGTACGTAGTACAAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4572 FBgn0038738 FBtr0083861,FBtr0083860,FBtr0302327 1 3 3 60 3R 15689431 15689451 CTTCAGAAACGCAACTATACC 57 15689391 15689412 CGGGATTGTCAATGTAGATGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 P5cr FBgn0015781 FBtr0083713 1 1 1 80 3R 14855601 14855619 GGATGAAGTCTGTTCTCCC 57 14855660 14855742 ATTAAAGTAGACCTGAGGTTCC 57 NA Drosophila melanogaster 61 CG34282 FBgn0085311 FBtr0112478 3 1 1 189 3R 14520989 14521079 TGTACAAGGTTTCGATCATCTG 58 14521229 14521247 TAGTCAGCCTTCTCCTGAC 58 NA Drosophila melanogaster 61 CG7671 FBgn0038609 FBtr0083577 3 1 1 64 3R 14192679 14192697 ATGGAGTTCGTCGACAAGG 59 14192724 14192808 TTAAACACGCTGAGATGACC 58 NA DesignNoJunction Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 1 2 3 88 3R 13219599 13219617 CCCTAAGATGCAAGGAGGG 59 13219468 13219549 AGGATCCATCTTCTTCACCTG 59 NA Drosophila melanogaster 61 Cad89D FBgn0038439 FBtr0301702 2 1 1 81 3R 12316382 12316401 CATCACCAATCTCACCATCC 58 12316236 12316343 CATGTTGATCTCTTCTATGACAGG 59 NA Drosophila melanogaster 61 Surf4 FBgn0019925 FBtr0083118,FBtr0083117 3 2 2 68 3R 11170642 11170661 TTTAAGGTCGACATAGCGGT 59 11170528 11170611 AATGGAGTAGGCAACGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 ea FBgn0000533 FBtr0083083 2 1 1 87 3R 11155262 11155283 GGATGGCTCTAATTGAATACAC 57 11155393 11155413 GTGATCACATATCTTGTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 2 6 6 81 3R 11027853 11027872 CTTCACAATGACGTTCCTGG 59 11027916 11027996 GTAAACGTCCTTGCTAGCG 59 NA Drosophila melanogaster 61 Rad17 FBgn0025808 FBtr0082974 1 1 1 80 3R 10488028 10488136 AGAGTTACTAGAAGAGTACACGG 58 10487970 10487989 TTCAATCCTCGAGATTTGGC 58 NA Drosophila melanogaster 61 CG14368 FBgn0038162 FBtr0082859 2 1 1 63 3R 9451181 9451199 AAGTCTTGTGTCTAGGCGA 58 9451136 9451154 ATCCACATCCACATCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32473 FBgn0052473 FBtr0082743,FBtr0082744,FBtr0082742 3 3 3 91 3R 9136958 9136978 GCAGTACTTATAAGCTCACCC 58 9137031 9137135 CCAACGGTAGTTGAAGGAC 58 NA Drosophila melanogaster 61 CG14391 FBgn0038078 FBtr0082663 2 1 1 61 3R 8520428 8520446 TCAGTACTGGGACGTTTCG 59 8520385 8520406 GCACGAATTTACGAATCATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31441 FBgn0051441 FBtr0082355 1 1 1 139 3R 7062932 7062950 AGTAAAGTGGTCCACGAGC 59 7063053 7063130 ATCTCGCAGTGGTACTTCC 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 2 3 3 96 3R 5284386 5284404 ATCAGCCTGATCAAATCCG 57 5284247 5284327 TGTGTCCATCAATCTGTAGG 57 NA Drosophila melanogaster 61 CG9362 FBgn0037696 FBtr0082044 2 1 1 80 3R 5281430 5281513 AATGCCAGGAGATACAAAGCT 59 5281370 5281393 GACATCAAGTTCTTGTAGTTCCTG 59 NA Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 1 2 2 60 3R 4476034 4476213 TTTGTTTGCAACCGGATCC 59 4475992 4476013 ATTATTCAGGCTTAGCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG42286 FBgn0259182 FBtr0299666 3 1 1 95 3R 4192156 4192484 GTATGAAATCGAGTTCCCAGG 58 4192081 4192099 GATAGTGCTCGTGGAACTC 57 NA Drosophila melanogaster 61 CG11286 FBgn0037516 FBtr0081779 2 1 1 62 3R 3597035 3597115 ACGATCTTAATTGCTATGTGCG 59 3596994 3597017 GAAGGAACTGCCTATCATATTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 alpha-Est6 FBgn0015574 FBtr0081549 3 1 1 66 3R 3354062 3354084 GCCTGTACTTAAACGTATACACC 59 3351735 3351753 TACACCATTACGGGCAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 2 4 4 81 3R 2182250 2182268 GTGGTTCGACAACACTACC 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 Snm1 FBgn0037338 FBtr0078688 3 1 1 80 3R 1381854 1381874 TTCACGAAATTGATGTGGACC 59 1381916 1381991 CTCCAGGACAGTGGTTAGC 59 NA Drosophila melanogaster 61 CG12590 FBgn0037294 FBtr0078773 3 1 1 60 3R 985676 985694 GCTTGAGAGCCTACTTCTG 57 985718 985736 GCTCCGAATGTCGTAAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9804 FBgn0037251 FBtr0078943 2 1 1 60 3R 262696 262714 CGGAGTTCCGAAACTACCT 59 262654 262674 CTTAGTCCGACTGTGTAGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11137 FBgn0037199 FBtr0078577 1 1 1 87 3L 22861067 22861085 GAACCAGAGTGAAGTGGTG 58 22860946 22861019 CATGGGAATGTTCTTAAGAGGT 58 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 2 4 4 88 3L 22709292 22709406 GTCAGTAAGGATCCAAACCC 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 msopa FBgn0004414 FBtr0078482 1 1 1 65 3L 22075938 22075956 CTTCATACAGATCGCCGTG 58 22075985 22076003 GGATCTTCCTGTGGTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aef1 FBgn0005694 FBtr0078349 3 1 3 115 3L 21428223 21428304 TCACCGAGACTACCTAATCC 58 21428382 21428400 GGCCACTATGACAATGTCG 58 NA InUTR Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317,FBtr0078316 2 2 2 101 3L 21190878 21190898 TCTGTACAAGCATCTTTGGAG 58 21190675 21190693 TTCCAAGCCATCAATTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33285 FBgn0053285 FBtr0078325 2 1 1 60 3L 21081671 21081692 CTCCAAATAGATCAACTGCGAG 59 21081632 21081651 CCATTAGAGACATGGGTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3618 FBgn0037028 FBtr0078271 1 1 1 60 3L 20809016 20809035 GATGTCAAAGCGTGTTTGAG 58 20808877 20808896 GGCAATAATTCGGAGTGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 obst-J FBgn0036940 FBtr0074866 3 1 1 138 3L 20124810 20124828 GGATTCCCAGCATAAACGC 59 20124632 20124650 CAGGGATCGGATATCCTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7365 FBgn0036939 FBtr0074867 3 1 1 93 3L 20117837 20117975 TCAACACCGAGACATTTACGA 59 20117764 20117783 AAGAATCGGGTATCCGTCTG 59 NA Drosophila melanogaster 61 Papst2 FBgn0036695 FBtr0075279 1 1 1 80 3L 17037242 17037327 CCCTTTACCTTACAATATCTGTGG 59 17037364 17037384 CTTGTTCCTCTTGCTGTAGAC 58 NA Drosophila melanogaster 61 Pros26 FBgn0002284 FBtr0075360 2 1 1 75 3L 16603349 16603367 AAGCATCCTGATTTCTCGC 58 16603217 16603235 TTACGGCAAAGTCATCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4753 FBgn0036622 FBtr0075422,FBtr0075421 3 2 2 88 3L 16372429 16372447 TTCTGCACTACTTGGTCAC 57 16372299 16372378 GAGGCTATAGAATCCTCCCA 57 NA Drosophila melanogaster 61 CG32152 FBgn0052152 FBtr0075489 3 1 1 60 3L 16135954 16135973 GATCGCTGGCTAAAGAAAGG 59 16135913 16135932 CAACCAGATAAAGAGCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0112850,FBtr0301472 1 3 7 80 3L 16070896 16073864 AAGAAGAGCTCAAGCAACTC 58 16073907 16073925 TTACTCTAATCAACGCGGC 58 NA Drosophila melanogaster 61 Cep135 FBgn0036480 FBtr0075638 3 1 1 89 3L 15119849 15119868 AGTACCACTGTCTAACCCAG 58 15119920 15120127 AGATCTGTCGCCTGAACTC 59 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041,FBtr0100044,FBtr0100042,FBtr0100039,FBtr0100043,FBtr0100040 1 6 6 115 3L 14223401 14223764 GTACCGAGAGTCGGAACTG 59 14223843 14223861 TCTGGCAGTTCTCGTTCTG 59 NA Drosophila melanogaster 61 CG10710 FBgn0036377 FBtr0075817 1 1 1 91 3L 13511772 13512487 ACGATAGAATAGCAAGCCGA 59 13511700 13511718 CCCAACTCTCCCTTGTCTG 59 NA InUTR Drosophila melanogaster 61 trn FBgn0010452 FBtr0075890 1 1 1 290 3L 13107781 13107801 CACCAACGATTTAATCTGCTG 58 13108495 13108513 TTATCATCGCACTGACAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075913,FBtr0075914 1 2 2 80 3L 12732902 12732922 TGGCTTCTGCAATTGAATCTC 59 12732961 12733038 CCAGTAGTTTCTCGAATTCCAC 59 NA Drosophila melanogaster 61 CG42255 FBgn0259140 FBtr0299545 3 1 1 80 3L 11796380 11796511 GGTTAAATGAGACTATAACGTTGGG 60 11796324 11796345 TCCAGAGACACTGAATACTTCC 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 3 4 4 80 3L 11518601 11518687 GGCAACAGAACGTACTTATGG 59 11518541 11518563 CATCACATAGTCGATGTACTGTG 59 NA Drosophila melanogaster 61 CG12522 FBgn0036131 FBtr0076209 3 1 1 138 3L 11101470 11101488 GAGTAGCTCTTCCACTTCG 57 11101590 11101608 CTTGGACTCCTCAGTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6321 FBgn0036117 FBtr0076242 3 1 1 84 3L 11053816 11053898 GTCCCGTCAATTGTGAGGA 59 11053750 11053770 TCAAAGTCCAACATTGTGGAC 59 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 3 4 4 81 3L 11030771 11030790 CTTTGGCTTCCTGAAGTACG 59 11030643 11030728 GGATTGGGCCAACTTATCCT 59 NA Drosophila melanogaster 61 CG32053 FBgn0052053 FBtr0076315 3 1 1 154 3L 10085344 10085363 GTACCCATCCATAGTGATGC 57 10084783 10085227 AATATAAGGGCAGCAGCTC 57 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 2 4 4 125 3L 9893174 9893262 TACCACAAAGAGTGGACAGAC 59 9893343 9893367 GGCTGTGAGATCTTTGATTATACTC 59 NA Drosophila melanogaster 61 Hsp67Bc FBgn0001229 FBtr0076497 1 1 1 60 3L 9365381 9365402 TTTGTCTTGAATTTGGACTCCC 59 9365342 9365361 GATTCGGGAACATATCGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13678 FBgn0035859 FBtr0076700 3 1 1 99 3L 8215942 8215962 ATCCATGGATTGTAAACCCTG 58 8216020 8216041 GTTTAATGCATCACAAGTAGGG 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Uba2 FBgn0029113 FBtr0076734 1 1 1 93 3L 8120383 8120459 GTAACATCTACTGATTATGGCGTC 59 8120313 8120333 GATTTACATGATTCCTGGCGG 59 NA Drosophila melanogaster 61 Clk FBgn0023076 FBtr0100132,FBtr0100134,FBtr0076785 2 3 3 80 3L 7759914 7759985 GTGGGCTACTTTCGTAACG 58 7759852 7759870 CGCAGGTTGTCCATTTGAG 59 NA Drosophila melanogaster 61 Sk2 FBgn0052484 FBtr0072984 2 1 1 127 3L 3048048 3048067 ATAGTCAATGGACTGCTGCA 60 3048154 3048654 TATGGTTCGTTGTAACAATGGG 59 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 2 4 12 62 3L 2461252 2465104 GATAGATGCGGAATTCGGA 57 2465129 2465148 ATTCCCGTCTTAAGAATGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 3 2 2 107 3L 2154402 2154491 GGGAAGCATTGAGGATTGG 58 2154313 2154332 GCTGTTTGAAAGGATGAGGA 58 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0100219 3 1 5 153 3L 1657048 1657066 GTCAAAGAGCAAGGTGGAC 58 1655012 1656931 CTGAGTCAGTTTGGACGGT 59 NA Drosophila melanogaster 61 nvy FBgn0005636 FBtr0072267 2 1 1 92 2R 20176862 20176973 CAGTGACACAGGTGAAACG 59 20177029 20177047 GTTCCTGCGTCATGATCTC 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 2 4 4 80 2R 19801155 19801173 GCACAGTCTACTTGTCCAG 57 19801216 19801294 TAGACTGACCGAATTTGTCC 57 NA Drosophila melanogaster 61 mRpL43 FBgn0034893 FBtr0072084 1 1 1 80 2R 19585982 19586000 AGAGAATCCCGGGATTGTG 59 19586044 19586127 TCGCCGTTCAAGTACTCTC 59 NA Drosophila melanogaster 61 CG30413 FBgn0050413 FBtr0072040 1 1 1 60 2R 19217230 19217251 GTCACGATCAAATTCACCTCTG 59 19217191 19217210 CGTATATCACCACTTGGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30195 FBgn0050195 FBtr0071931 1 1 1 108 2R 18534545 18534565 GCAGAGATTTCTGGGATTCAC 59 18534402 18534420 GATGGGCACAAATCTTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG2921 FBgn0034689 FBtr0071800 2 1 1 83 2R 17962310 17962329 ATTGGATTGATCTCCAGGCT 58 17962191 17962264 ATCTCGATCGGGTTCTTCG 59 NA Drosophila melanogaster 61 CG9822 FBgn0034623 FBtr0071612 3 1 1 146 2R 17235327 17235348 GAGTACGGTAGATTTCAAACGG 59 17235145 17235223 GCTTTCATGGAATTTACCATCG 58 NA Drosophila melanogaster 61 CG9418 FBgn0026582 FBtr0071573 1 1 1 63 2R 17034169 17034187 AAGTTGCCCTACATCGAGG 59 17034273 17034291 ACATTTGCAACTGCTCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Obp57e FBgn0050145 FBtr0086265 1 1 1 84 2R 16435662 16435747 ATGTTCTCGCTAACACTTCAG 58 16435598 16435616 TTCTCCATCACTTGGTGGG 59 NA Drosophila melanogaster 61 mei-W68 FBgn0002716 FBtr0086461 2 1 1 96 2R 15345881 15345899 CTAAGCTTGGGCATACTGG 58 15346017 15346035 CATACAAGCTGCTGTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15084 FBgn0034402 FBtr0086619 3 1 1 60 2R 14738822 14738840 CAAGTTGTACCGGAAACCA 58 14738864 14738882 ACTTGTACATGGCATCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 2 3 3 135 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592683 13593865 TCTCGTTCAAATTCTGCTCG 58 NA Drosophila melanogaster 61 CG8366 FBgn0034054 FBtr0087201 2 1 1 80 2R 11842951 11842971 TGTATCGCTTAAGATCGTCGA 59 11843013 11843088 GCACAAGTACATGCTGCAG 59 NA Drosophila melanogaster 61 CG12964 FBgn0034022 FBtr0273307 3 1 1 108 2R 11377132 11377150 ATCTGTATCCCGAAGTGGC 59 11376845 11377062 GGATATTGAGCAACTGCACTC 59 NA Drosophila melanogaster 61 CG30475 FBgn0260478 FBtr0301714 3 1 1 169 2R 10840073 10840609 CAGCTGGATAGTCCACAGG 59 10839922 10839940 TGATGACTGTGACTGTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 3 1 2 110 2R 10659128 10659306 GATCCCAATCATCAAGAAAGAC 57 10659377 10659395 AGATAATTGGCGACGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13333 FBgn0033855 FBtr0087676 2 1 1 60 2R 9443701 9443719 CAACTACGACAACCACGAC 58 9443742 9443761 ATGTTCAGGAGATCAGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 3 4 4 80 2R 9074416 9074493 TCAGTAAGATCACGCAGGAG 59 9074355 9074373 TAAAGCCGTGATTGAAGCC 58 NA Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112425 2 1 2 180 2R 8052991 8053138 TGTTGAAGGCGATTATCGT 57 8052829 8052848 TGTTTCAGACTATCATGGCC 57 NA Drosophila melanogaster 61 CG30037 FBgn0050037 FBtr0088049 2 1 1 113 2R 7867873 7867891 GTGTTCTTGGCCTACAGGA 59 7867720 7867738 TGGATCCAAGTAATCGGCT 58 NA DesignNoJunction Drosophila melanogaster 61 alphaTry FBgn0003863 FBtr0088161 2 1 1 70 2R 7232218 7232236 GTCTGAGCTCTTCCCTGAG 59 7232166 7232185 GTTAGCTGGGTTGTAAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 3 2 2 80 2R 6226720 6226739 ATCTGGCAGCAGATACTCTC 59 6226603 6226678 GGGATGGACAATCGTAAGTG 58 NA Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 1 1 1 73 2R 5287556 5287762 GAACGTGTTACTGTCTGCA 58 5287501 5287519 AGAAATACGCCCAGAACGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 1 7 7 80 2R 3960905 3960923 GTACGCCAATTTCAGTGCC 59 3960964 3961113 GTTGAGACACTGTCGTAATGAG 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089043,FBtr0089044,FBtr0089042 3 3 3 164 2R 3106660 3107963 CGCATGATAACGAGGTTCG 59 3108182 3108200 CCGTGGAGATTAGGTCGTC 59 NA Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 2 3 3 81 2R 2921962 2922139 TATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086116 1 2 3 135 2R 2556822 2556840 TATCCTGTTGCAGTGGAGG 59 2556939 2557014 ATGTCCTGCATGGAGTAGC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 2 4 5 82 2R 2503183 2503201 GGAGCTGGAAGCTATCTCC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 l(2)09851 FBgn0022288 FBtr0086043 1 1 1 60 2R 1643394 1643416 AGGAGATTAAAGAGCTACACTGG 59 1643434 1643454 TGGGCTGTAGAAAGTAGAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-525i FBgn0083030 FBtr0113553 1 1 1 64 2L 20421645 20421666 ACTTACCCTAAATCTGTGTCTC 57 20421691 20421709 ATTCAGGATGCCGATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34173 FBgn0085202 FBtr0112364 2 1 1 69 2L 22054098 22054172 TTCAAGATGTTTCGCACACTG 59 22054049 22054067 CACGGACCTCATCTTTGGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 His2B:CG33892 FBgn0053892 FBtr0091896 1 1 1 60 2L 21477941 21477960 AGAAGAACATCACCAAGACC 57 21477900 21477918 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33828 FBgn0053828 FBtr0091832 1 1 1 60 2L 21476517 21476536 AGTTGAGAAGAAAGTGGTCC 57 21476559 21476577 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ddc FBgn0000422 FBtr0290291,FBtr0081166,FBtr0081167 3 3 3 296 2L 19118125 19119170 GAATATACGCGAAAGGCGC 59 19117847 19117866 CAATCCATCATGACCACCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4140 FBgn0028535 FBtr0080728 2 1 1 130 2L 15007153 15007220 ACAAGAACCCACAAAGCAG 58 15007041 15007059 CGTGTATCCGTCGTTATCC 57 NA Drosophila melanogaster 61 Sop2 FBgn0001961 FBtr0080570,FBtr0080569 1 2 2 80 2L 13829395 13829413 CGAGACATACACCTTTGGC 58 13829264 13829352 GATAAGGCAATCTGGGTTCG 58 NA Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 2 5 5 80 2L 13634168 13634249 GTTCACCTACAGAGATTTCACTG 59 13634289 13634307 CAAATTCCACCAGAGGCTC 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139,FBtr0089910,FBtr0113040 1 5 9 111 2L 13275766 13275784 AATAGTCCGACCATCGAGC 59 13275859 13276258 AGACTCCATTACCTTGCGG 59 NA Drosophila melanogaster 61 JhI-21 FBgn0028425 FBtr0089655,FBtr0089656 1 2 2 80 2L 12053082 12053673 CTACAGGATCCATACAAGAATCTG 58 12053025 12053045 GTTGACCAGAACATAGATGCT 58 NA Drosophila melanogaster 61 CG4747 FBgn0043456 FBtr0079930 1 1 1 80 2L 10006578 10006919 CCAAGGATCTCGTATTTGGC 58 10006959 10006980 TTGTAGACATTTCAACGTAGGC 59 NA Drosophila melanogaster 61 yip2 FBgn0040064 FBtr0079876 3 1 1 183 2L 9915778 9916056 GAAATGTGATCGCGTCCTC 59 9916203 9916221 CCGGTAAGGGCTATCTTGG 59 NA Drosophila melanogaster 61 CG13392 FBgn0032033 FBtr0079720 1 1 1 80 2L 8382516 8382601 AAATAGGCGAAGTATGGTCGT 59 8382456 8382474 TATTTATGTAGGCGCCCGT 59 NA Drosophila melanogaster 61 Scgalpha FBgn0032013 FBtr0079597 3 1 1 80 2L 8304702 8304720 CACATCTGCGAAGAGTCCT 59 8304762 8304853 ATTGGAAGAGCTCTCAGAACC 59 NA Drosophila melanogaster 61 Pcp FBgn0003046 FBtr0079388 3 1 1 63 2L 7021725 7021815 TTGTGAACTTCATCGTTGCG 59 7021841 7021859 TCCGGAATGTAGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17264 FBgn0031490 FBtr0077647 2 1 1 80 2L 3019861 3019882 ATATCTTCAGCATAGGTGGTGG 59 3019921 3019998 CATCGTAGTACAAGTGCTGAC 58 NA Drosophila melanogaster 61 CG4552 FBgn0031304 FBtr0077956 1 1 1 94 2L 1131097 1131116 CTACTTCGGCGATCAAATGG 59 1131173 1131273 CTGATTTAGTCTGCTGCGC 59 NA Drosophila melanogaster 61 CG15880 FBgn0031283 FBtr0078040 3 1 1 90 2L 817175 817254 CTTTCCCTTGGCCTACTCC 59 817103 817122 GAAGTCAAAGTAGACCGTGC 59 NA Drosophila melanogaster 61 Gr21a FBgn0041250 FBtr0078006 3 1 1 107 2L 782428 782499 CAACCTACAAGGAGGTGGG 59 782570 782588 AGTCAAGTCCGACCTTTCG 59 NA Drosophila melanogaster 61 lectin-21Ca FBgn0040107 FBtr0077998 1 1 1 60 2L 625177 625195 GACAATCCAGAGCGAAGAC 58 625216 625237 GTCATTGATGTCCTTAAGTTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2807 FBgn0031266 FBtr0078068 3 1 1 121 2L 568425 568610 CACATGAAGATATCGAGGCAC 59 568693 568711 GTCGCTGTCGAAGAATCCT 59 NA Drosophila melanogaster 61 CG11885 FBgn0031253 FBtr0078089 3 1 1 62 2L 421321 421339 CAAATCGGATTCGACAGGC 59 421277 421295 GAACACTATCTCCGTGGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0078136 2 1 3 88 2L 284959 285442 CCTGGATGCGATAATTCAGG 58 284890 284908 GAGGTTTCTTGGGTGTCAG 58 NA Drosophila melanogaster 61 M(2)21AB FBgn0005278 FBtr0089431,FBtr0089436,FBtr0089435 2 3 10 95 2L 111035 111053 TAGCCATCGAGCAACAGTC 59 111110 112702 CAAACATGATACCCTGGTCAC 59 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100310,FBtr0100309,FBtr0078158 1 3 8 101 2L 120071 120429 CAGATACGCGAGCAATGAC 59 119988 120007 GATTTGGGAGGTTGTACTGC 59 NA InUTR Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 7 8 133 2L 119442 119460 CACACTGCTAAACCTGCTG 59 119220 119290 AGTCCAGGACATCAGTCTG 58 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0299837 1 2 3 80 2L 232088 232299 GCATCATACTTCTTTACTGCCT 58 232029 232047 TCGGTGTTATCAAGTCCCA 58 NA Drosophila melanogaster 61 CG14346 FBgn0031337 FBtr0077927 1 1 2 87 2L 1368472 1368576 GGTTCAATCCGTACGAACC 58 1368627 1368645 CTGTAGAGGCTCTGACCAG 58 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 1 5 6 195 2L 1726645 1727653 AGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 1 5 6 195 2L 1726645 1727653 AGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 AIF FBgn0031392 FBtr0077831 2 1 2 153 2L 2152458 2152674 TTAAAGTGGGCTTTGCTGAC 59 2152790 2152808 GTGGTCTCCTTTCGTTTGC 59 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 2 6 6 80 2L 2361019 2361043 GTCGTCTATGATATACAGAATCAGG 58 2360793 2360981 TGGTGAGGCTTGTTTATGC 58 NA Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0077621,FBtr0077623 2 2 3 199 2L 2856384 2856402 TCCAACAGGATCATCCACG 59 2856564 2856645 CACGCTTAGAAGTTCTTGGT 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3558 FBgn0025681 FBtr0077645,FBtr0077644 1 2 3 92 2L 2994987 2995005 GCCCATGAGATGATCAAGC 58 2995060 2995444 GATGTTCGTCTGAAGGATCG 58 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077381 2 1 2 93 2L 4795868 4795886 CTCCAAGGTCGCTACTACG 59 4795942 4796077 GTGTTAAGGACAAACCGCAG 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 3 11 11 110 2L 4994864 4994882 CTTGTCGCTCCTAACCCTC 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 3 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 2 5 5 87 2L 5155462 5155481 TTTCTGTGAGAAGACCCTGG 59 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 Oscillin FBgn0031717 FBtr0079102,FBtr0079101 3 2 2 103 2L 5547903 5547981 GTGCCGACAGATACTTCGT 59 5548047 5548066 CTGAAAGGATACCTTGCCCT 59 NA Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079163 1 1 2 115 2L 5765981 5765999 TCAGTGCTCTATTGTGCGT 59 5764195 5764213 CTCAATGTAGGCATCGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079148,FBtr0079147,FBtr0079146 1 3 3 105 2L 5947159 5947245 GTCTGGAGGACAAATTCCC 57 5947314 5947332 ATATGCTCAGGGTGATTGC 57 NA Drosophila melanogaster 61 CG12393 FBgn0031768 FBtr0079183,FBtr0079184,FBtr0273281 2 3 3 184 2L 6049171 6049190 CAACTACTGCTTCGAGATCG 58 6049337 6049422 CGAGCATCTTGTTTCTTGC 57 NA Drosophila melanogaster 61 Kr-h2 FBgn0028419 FBtr0079192,FBtr0302212 2 2 2 83 2L 6072602 6072620 CATAGATTCCGCGCTATGG 58 6072666 6072742 TGTTGTGAGGTAAAGATGGG 57 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0091497 3 1 2 80 2L 6293685 6296614 CATATCAGCTCCTGTGGTC 57 6296657 6296676 AACGGATACTCTGAAGTGAC 57 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 1 2 2 248 2L 6528791 6528809 TCAACGAGATCGAGGAGTG 58 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0079314 3 3 6 122 2L 6691068 6691086 TCACGATACCGTGAATGGA 58 6690127 6690983 ACTAGAATGTTGCCTGAGGG 59 NA Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 2 2 2 82 2L 6862439 6862457 GGTGGCTACCTAATATCGC 57 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 sip2 FBgn0031878 FBtr0079360,FBtr0079357,FBtr0079361,FBtr0079359,FBtr0079358 1 5 5 80 2L 6961942 6961961 CAATGGAATCGATTCAGCCG 59 6961817 6961899 CGTTCATCAACCACATGCT 58 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 3 3 3 126 2L 7032326 7032344 GCCAGCTAGTGATAGAGCC 59 7032085 7032104 CAGGAACTTGTAGTCCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112611 3 1 3 82 2L 7155539 7155558 CACCAGAAAGAACTACTGGC 58 7118913 7155495 GCAGCACTTACCTCATTCTC 58 NA Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 2 2 2 107 2L 8210627 8210645 AAGGGCTATCCCGAAACTG 59 8210462 8210556 GGCTGACTTCTCCTCATCC 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 2 4 4 120 2L 8536961 8536979 CATACAACCGACATCGGTG 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 3 4 5 90 2L 9272526 9272544 GGGACGCATTAAAGAAGCA 58 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 1 2 2 99 2L 9460742 9460944 AAGGTCTTGAGGCAATCCC 59 9461007 9461025 CTATCAGGCCCTTGGTCTC 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 1 3 3 80 2L 9575428 9575514 TGGTAAACTTCGCGTAAATCG 59 9575368 9575386 TTCACAAAGTCGGTGTCCA 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079914,FBtr0079915 1 3 6 80 2L 9807361 9807381 GTGTGCTAATCTCATCGATGG 59 9802429 9807319 TTGTAACTCCCAGCGTCAG 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 CG4619 FBgn0032166 FBtr0300550,FBtr0079883 2 2 2 136 2L 9940470 9940488 CTAACCGCAGAACAGACTC 58 9940648 9940666 AGTTCCTTTGCATTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 3 2 2 98 2L 9962388 9962406 TGCTACTCAACGTACTGGT 58 9962050 9962327 TGAGGAAATTCTGAAGCAGG 57 NA Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 3 2 2 109 2L 10011453 10011471 CATCGTGTGGGCATTAACC 59 10011539 10011616 TATAGTTGCTCTCATATAGTGGCC 59 NA Drosophila melanogaster 61 bsk FBgn0000229 FBtr0300981,FBtr0300982,FBtr0302378,FBtr0080087 2 4 4 127 2L 10248910 10249108 CAAGGAATAGTATGCGCCG 58 10248801 10248822 AGCTTCATTAGCTTGAATTCCC 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089735 3 2 4 162 2L 10264252 10264554 GGAAACACAAGTGCAGACG 59 10264810 10264828 CTCCAGGTACTGATACCGC 59 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 1 4 4 80 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415400 10415480 GCTGAAGGTACTTTAAGGCA 57 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 3 4 4 81 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415401 10415481 TGCTGAAGGTACTTTAAGGC 57 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 2 3 3 168 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976004 10976023 AACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0112856 3 1 4 81 2L 11142404 11142783 CATATTCGCGACATTTGCTC 58 11142342 11142363 CAAAGACACGTTGATGATATGG 57 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115 3 2 4 89 2L 11165647 11165665 CCTCAAGACTGTATGGCAC 57 11163929 11165594 CCATGGAATCTCGAGATGG 57 NA Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 3 2 2 95 2L 11368999 11369735 GGATTTATGGGTCTGCATCC 58 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 3 2 2 80 2L 11511227 11511246 GTCAACGGTGTATGATGAGG 58 11510838 11511186 ACATACCTTAGAGTCTCTGCT 57 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 2 3 5 81 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271636 12271654 GTGTATGGGACTATTCGGC 57 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 1 2 2 60 2L 12693379 12693397 CTCCCATCCAAACATGGTC 58 12693483 12693502 GGCATCATCAAAGGTCATCC 59 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090028,FBtr0090029 3 2 17 94 2L 12736803 12737966 AAGTATTCCGGGTTCTGGC 59 12738023 12738042 GAAGTAGTACAGGAAGGCGA 59 NA Drosophila melanogaster 61 DnaJ-H FBgn0032474 FBtr0080494,FBtr0080493 1 2 2 98 2L 13164196 13164326 CCTTCGATACGACCTGTCC 59 13164116 13164135 TCTGCTCTACGAAACCACTG 59 NA Drosophila melanogaster 61 CG31729 FBgn0051729 FBtr0080462 3 1 2 88 2L 13296732 13297625 TGGTATCTCTTTAGCTGCTGG 59 13297675 13297693 TTCTCCGTATTGACCCGTC 59 NA Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514,FBtr0080513 1 2 2 106 2L 13535018 13546920 CCTCTTAAAGGCTGCATGG 58 13534930 13534948 GGAACAACAGCCAAATGCT 59 NA InUTR Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 1 5 5 80 2L 13634172 13634251 ACCTACAGAGATTTCACTGGC 59 13634293 13634311 CTCGCAAATTCCACCAGAG 58 NA Drosophila melanogaster 61 sec71 FBgn0028538 FBtr0080537,FBtr0080538 2 2 2 84 2L 13794621 13794909 CATATCAGCTGCCTACAATGAG 59 13794950 13794972 GGAGTAGTCGTTTCCATTAAGTG 59 NA Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0080594,FBtr0300594 1 2 3 89 2L 14076835 14076853 AAGATCGACATCACGTGGT 59 14076905 14077131 TAAATCCAGCTGGAATCCGT 59 NA Drosophila melanogaster 61 Rab14 FBgn0015791 FBtr0080627 2 1 3 125 2L 14357269 14357356 AATGTCCCAACATGACTGC 58 14357444 14357528 TGGCCATGAATTTCTTCTCG 58 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 2 2 2 80 2L 14363069 14363087 CAAGTACCTGGACCTGGTC 59 14363131 14363214 TGGACAAAGCGGTTTAGGT 59 NA Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 1 5 5 159 2L 14977341 14977359 ATGAAGGCTTTGACAGGTG 58 14977069 14977218 TAAAGCAGAGAATGCCTGC 58 NA Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 2 2 2 80 2L 15052134 15052488 GAGAATCTGATATACACTTACACGG 59 15052078 15052096 ATCACCTGTGTAGATGGGC 59 NA Drosophila melanogaster 61 stc FBgn0001978 FBtr0080706,FBtr0080705 2 2 2 94 2L 15117482 15117563 TAAGGATAGGTGCTGGTTCC 58 15117620 15117638 AAGCATTGTTACTGGGCAC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 2 4 4 80 2L 15267015 15267158 TGTCCACGTACCAGATGTG 59 15266953 15266971 CGGTCTCCTGGTGTATGTC 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 2 4 5 81 2L 15760338 15760416 CGATCCGGATTACAGAACCT 59 15760276 15760295 TGGATAGTTGGCTCCATAGC 59 NA Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 3 2 2 81 2L 16308314 16308401 GAGAAGCTCACAATGTTGGC 59 16308442 16308463 TGATGATATAGGTCAGCTCCTG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0100399 2 1 7 81 2L 16483832 16483850 GCAAGGACTTCGACATCCT 59 16475394 16481531 GGTCTACCCGGTCTTTCTG 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080940,FBtr0080942 3 2 3 150 2L 16724973 16727010 TAACAACGAATACATCCAGTCG 58 16724780 16724862 CAACTGGTATTGCACCTGG 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 3 4 12 95 2L 17717904 17717922 CTCCCTTCAATCCCAACGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 2 4 12 113 2L 17717920 17717940 TAGTATACAGCCTGACTGCTC 58 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 Fas3 FBgn0000636 FBtr0301391,FBtr0112805 1 2 5 186 2L 18387306 18388391 CACAAACGAAACTCAAATCGAC 59 18388538 18388556 GTGATGGCGTCTTTCAACC 59 NA Drosophila melanogaster 61 CG10341 FBgn0032701 FBtr0081097,FBtr0113042 1 2 2 93 2L 18698962 18699039 AAACAGCGACAACAGAAGC 59 18699093 18699114 GCTTGTGTTGACTCATTTACCA 59 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081159,FBtr0081158 1 2 3 85 2L 19166351 19168110 CAGTAAAGCTGTTACTCCTAAAGG 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 Pax FBgn0041789 FBtr0100449,FBtr0081211 2 2 6 97 2L 19410631 19419876 GCCAGGATATGCTCTATTAGC 58 19410554 19410572 CTTGATGTTTGGGCTGGAC 59 NA Drosophila melanogaster 61 CG10026 FBgn0032785 FBtr0081237,FBtr0081236,FBtr0081238 3 3 3 85 2L 19457161 19457238 TACTAGTGACCTCCATGCC 58 19457286 19457305 AAATATCTTGAATGCCGCGT 58 NA Drosophila melanogaster 61 CG13966 FBgn0032838 FBtr0302173 2 1 2 103 2L 19970591 19970609 ACACTCAGTGTCAAGGTCC 59 19970448 19970525 GGCTCAACATTATCCTGGGT 59 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 2 5 5 83 2L 20355739 20355816 GACGCAAATACTCAGTCAGG 58 20355862 20355880 ATAAGCAAATCCTCGTGCG 58 NA Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0112884 2 1 5 94 2L 20356718 20356736 AATAATCCCAGCTTGCCGA 59 20356794 20356886 TGTTGACTCAGATGAGCGG 59 NA Drosophila melanogaster 61 phr6-4 FBgn0016054 FBtr0081404,FBtr0081405 3 2 2 60 2L 20644664 20644683 CCCTAATAAGTTTCCGGGAG 57 20644560 20644579 CTTTAGGGATTCCTCCATGC 58 NA DesignNoJunction Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 1 3 3 98 2L 20688521 20688542 TCCCTCTACGAATATAATGGTG 57 20688325 20688464 CGAGTTGTAGTTATGTTGCTG 57 NA Drosophila melanogaster 61 CG9317 FBgn0032879 FBtr0081394,FBtr0081395 1 2 2 86 2L 20729936 20729954 GACTATTGGTGTCGCATCC 58 20729657 20729887 GTCGTTATCCAGTTCCTTGG 58 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826077 20826641 CACTTGTCATTGTCGATGGT 58 NA Drosophila melanogaster 61 CG9339 FBgn0032901 FBtr0081442,FBtr0081446,FBtr0081441,FBtr0081443,FBtr0081440,FBtr0081447 2 6 9 94 2L 20882458 20903027 CAAAGCAAACTGGCAAGGA 59 20882382 20882401 GAGTATGTTCTTCACGTCGC 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 1 3 4 82 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257158 21257176 GTAAGCTTGCAAGCTCTGC 59 NA Drosophila melanogaster 61 Hr39 FBgn0261239 FBtr0081481,FBtr0081480,FBtr0081479 3 3 4 84 2L 21257040 21257113 TGCAGTCAGATACGACAGAG 59 21257159 21257178 GTGTAAGCTTGCAAGCTCTG 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 1 5 5 80 2L 21617537 21617559 GATAGTAATAGTCGCGAATGCAG 59 21617418 21617498 TATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 2 3 3 148 2L 22428467 22428485 TTAATGCCGATGTGCATCG 59 22427784 22428359 GATATCCTCAAGATCATCAGCAC 59 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 1 3 3 80 2L 22818639 22820176 ATTGTGGATCCAATCTCGAC 57 22820218 22820237 AACAACCAATTGCTTTGCAG 58 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 sxc FBgn0261403 FBtr0086085,FBtr0086084,FBtr0086086 1 3 3 80 2R 1213437 1213458 TAGAACTGCAACCAAATTTCCC 59 1213499 1213580 CAGCTTCTTTAACCTGCCC 58 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299920 3 1 4 133 2R 1327135 1327153 TACGTGGACTTGGTGAGTG 59 1327249 1340794 GTTGAGAATGACTCCTTGCG 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0086040 3 1 6 102 2R 1590898 1590983 TAAACAAGTCACCGACACCA 59 1591048 1591066 AAATTCCCGCTACTGTCGT 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 1 3 6 101 2R 2039490 2039581 CTTGATGTTACCGAGGACTG 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 3 3 6 103 2R 2039490 2039582 ACTTGATGTTACCGAGGACTG 59 2039407 2039425 TGTAGCTGTGATTCTGCGA 59 NA Drosophila melanogaster 61 bin3 FBgn0033073 FBtr0085993,FBtr0085992 2 2 2 80 2R 2126347 2126367 GGATTCAGTCACAGCTATACG 58 2126406 2126499 CTTTGCATACAACTGTATGGGT 59 NA Drosophila melanogaster 61 CG3409 FBgn0033095 FBtr0086140,FBtr0302166 1 2 2 80 2R 2588430 2588449 TCAGGGAGTTGGAATGATCG 59 2588305 2588389 TAGAAGGTGTCATCCCATCTG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111080 3 1 59 80 2R 3243725 3249231 TCATCACAGAACCCATTGGT 59 3243664 3243683 TCGAGCTCTTTATACGGTCG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111077 3 1 59 81 2R 3246431 3249237 GATTGGTCATCACAGAACCC 58 3246369 3246389 AGCTCTACGTCTATGAACTGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 3 3 59 83 2R 3244530 3244548 CTGGACAAGCCTATGGGTC 59 3236468 3244489 GAACTTGTACCATCTATAAACTGGC 60 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111098,FBtr0111062 3 3 59 80 2R 3236477 3238102 CCAGTTCCCATTATGAGATGG 58 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300476,FBtr0300481,FBtr0300480 3 3 8 92 2R 3362871 3362952 AATAAATGCAGGAGATCGGC 58 3361300 3361319 GGTTGTGATGTGAAGATCCC 58 NA Drosophila melanogaster 61 CG1600 FBgn0033188 FBtr0088958,FBtr0088957,FBtr0088956 2 3 3 188 2R 3414781 3414799 AAGCCCAAGATCCTCATCG 59 3414544 3414562 GTACAGGCATTCGTTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088939 1 1 5 137 2R 3575794 3582607 GAATCGCGACAAAGAAAGC 58 3574434 3574452 AAATAGACCCTCACGGGAG 58 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112837 2 1 3 83 2R 3592967 3592985 GAAAGGCTGAAACAACTGC 57 3590738 3592923 TGATATTCGTAGCCCAATACTG 57 NA Drosophila melanogaster 61 tor FBgn0003733 FBtr0112838,FBtr0088938 2 2 3 84 2R 3592978 3592996 ACGATGTTCCAGAAAGGCT 59 3592854 3592933 TCCACTTTACTGTTTAGACCGT 59 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0113050 3 1 2 123 2R 3677971 3677991 TCGCCTACCTCATCATATTCG 59 3678134 3678208 TTGTGCCTCTCCTTGATGG 59 NA Drosophila melanogaster 61 CG14764 FBgn0033236 FBtr0088880 1 1 1 71 2R 3841407 3841427 CAGCAGTTTAAAGAGTTCCAG 57 3835975 3835994 CTTTGGGTCTATTTCGAGCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 1 2 4 121 2R 3873199 3873217 TGACATTGATCTTTGGCCG 58 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 mtt FBgn0050361 FBtr0088756,FBtr0273326,FBtr0273325,FBtr0273327 3 4 4 80 2R 4367409 4367428 TGTTATTTGCACGGTCTACG 58 4366971 4367369 ATGGTGAATCCAATATGCTTCG 59 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0088665 2 1 2 84 2R 4909286 4909304 GTCTGCAGGATCTGGACAG 59 4908979 4909240 GTTGTGATGTCGACTTTCTCC 59 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 1 2 2 106 2R 5175035 5175053 TGGACTCAGAACCACTGTC 59 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 2 3 5 83 2R 5884116 5885217 AGCTAGCATTCCTCGATGTC 59 5884052 5884070 CGTAGTCGTCAATGTTGCG 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 1 3 4 105 2R 6034471 6034492 TGCTTAACTCATATCAGTTGGG 58 6034320 6034408 CTATGAAGGCTTAACGTAACAC 57 NA Drosophila melanogaster 61 CG12214 FBgn0033495 FBtr0088370,FBtr0088369 1 2 2 60 2R 6045279 6045297 GGTGAGGGAACTGGATCTG 59 6045237 6045255 TATGCTGAAGACCTCCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 2 16 17 81 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193032 6193050 AAGTTGTATTTGGCACGGG 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343,FBtr0299829 2 4 17 107 2R 6181258 6181375 CTGAGATCGGAGGTCAAGG 59 6181661 6181680 ACACTTGTAGCGAATCACGA 59 NA Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 2 1 1 69 2R 6199180 6199199 AAGATTCCATACGAGACGGA 58 6199079 6199097 TGTTGAAACTGCACTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp49a1 FBgn0033524 FBtr0088311,FBtr0088313,FBtr0088312 3 3 3 80 2R 6338168 6338261 GGAAACTCTACGAATGCGAC 59 6338107 6338126 ACGTGGTAACCATTGATGAC 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089356 1 1 26 166 2R 6419740 6419758 GAGGAGGACATGACAATGG 57 6414712 6419549 ACAACCATTGAGTCTTGGG 57 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 2 5 5 106 2R 6624407 6624428 AAACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 tou FBgn0033636 FBtr0088091 2 1 3 119 2R 7469246 7470532 CATTATGAAAGCGAATTGCCAG 59 7469148 7469166 ATGTTGTCCATCTTGGGCT 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 2 4 4 80 2R 7786099 7786119 GCCATTAACCACAATAAGCCA 59 7785970 7786059 TCCACTGCTTATCCTGTTGAG 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087889 2 1 4 145 2R 8466749 8466767 AGTATGTAGAGCGGTTGGC 59 8466045 8466640 CTTGGTATTGACCTCGGCA 59 NA Drosophila melanogaster 61 CG8632 FBgn0033762 FBtr0087845 1 1 2 94 2R 8541555 8541642 ACCAGCAGAATCTATTCACTG 57 8541698 8541716 CTCCTTTCTGTTGTCGAGC 58 NA Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 3 2 2 80 2R 8887544 8887658 CGGAACTTATAAGCTTATCCCTG 58 8887698 8887716 AAATAGTGGGAGGCACCTC 59 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 2 3 3 90 2R 9056874 9056894 AGGCCATTGTCTATTCCTACG 59 9056944 9057020 GCCTCATCCACAAAGATAAGG 58 NA Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 1 3 3 80 2R 9057272 9057290 ACGAAAGCATCTCCTTTGG 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 1 2 2 60 2R 9134728 9134746 AACACCATCTTCGCTTTGG 58 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 Vmat FBgn0260964 FBtr0091491,FBtr0091493 3 2 3 82 2R 9406088 9406109 ACTCTGCTTTATGTATGCTCCA 59 9405629 9406051 GTCCATAGATCAAAGACTTCTTCTC 59 NA Drosophila melanogaster 61 CG6347 FBgn0033874 FBtr0087637 3 1 1 75 2R 9725506 9725524 AAGGAGATAGCCACCTTGC 59 9726002 9726022 CAAAGTTGATATGGCCATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087605 1 1 4 109 2R 9876011 9876032 GAAGCAAGTCATAACAGATGTG 57 9874962 9875881 TTGAGTATCCATCACCCGT 58 NA Drosophila melanogaster 61 CG8468 FBgn0033913 FBtr0087534,FBtr0087533,FBtr0087532 1 3 3 157 2R 10116659 10116677 TTCGGTATCTGCATTGCCT 59 10116798 10116933 ATCACATAGAGGCCACCTG 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 1 6 7 130 2R 10490376 10490679 TGATTGACGCACAAACACAG 59 10490265 10490283 GAAATCGACGCGAATACGG 59 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 3 3 4 100 2R 10756534 10757571 GAATATTACATCAGCCAGGTGG 59 10756455 10756473 AACAATTGGACGTAGCTGC 58 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110998,FBtr0110995 2 2 6 126 2R 10836922 10838202 CGGAGCATCGTTATTTCCC 58 10836443 10836461 GAAGATGTGTCCGTTGACG 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 2 3 7 92 2R 11545902 11546128 CCTCACAAGCCATGTATCC 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320,FBtr0300463 3 2 2 139 2R 11575747 11575765 GAGTTCGAGCACTTCACTG 58 11575562 11575581 CATACTCCTAGTTGGGCCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Asph FBgn0034075 FBtr0300575 3 1 3 81 2R 12001316 12001334 CGAAGATTGACGATTGCCA 58 12001376 12001548 CGGAATATTCATCGTCCAAAGG 59 NA Drosophila melanogaster 61 Got1 FBgn0001124 FBtr0087231 3 1 2 107 2R 12025935 12026281 AACTTCCAGCTATCCACGA 58 12026352 12026370 CTTGTTGGGATTGCTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0273340,FBtr0087011,FBtr0087012,FBtr0302611,FBtr0087010,FBtr0113378,FBtr0300958 2 7 9 80 2R 12959277 12959296 GAGATGACAACACCCAAACC 59 12958995 12959238 GACTTGAGCTTGAGTGTTATCAC 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086993 3 1 7 93 2R 13163485 13163503 GACACCGAATGCAAGTTCG 59 13163557 13183349 ATGTACATACCTTGATGCTGTC 58 NA DesignRelaxed Drosophila melanogaster 61 eIF3-S9 FBgn0034237 FBtr0086942,FBtr0086941 3 2 2 90 2R 13424076 13424210 GTGATGAAGATCTGCTGGG 58 13424262 13424282 TTTGGGATATTGTCCACTACC 57 NA Drosophila melanogaster 61 CG6406 FBgn0034269 FBtr0086884,FBtr0086883 1 2 2 99 2R 13623909 13623927 CTTCGCTACTGCACTTGTG 59 13623773 13623850 GGATCAGATCCATAACTCATTCG 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299706 3 4 7 191 2R 13696981 13697000 ACGGATCAGAAGAGTTTGGA 58 13697154 13708517 ATTGAGCTTTCCACTCTGC 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 1 3 7 93 2R 13714749 13714767 ATCAGAATCAGGATCGCCG 59 13714819 13714908 ATGTGAGGTCTGTAGATAGATCTG 59 NA Drosophila melanogaster 61 stau FBgn0003520 FBtr0301614,FBtr0086783,FBtr0086784 3 3 3 93 2R 14007593 14007613 CAGCAACAGTACGAGTAACAC 59 14007460 14007540 GAAGTTGACCTCAAAGTCCAG 58 NA Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 1 8 8 94 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032540 14032558 TCATCGGATACAGACGCTC 59 NA Drosophila melanogaster 61 CG14502 FBgn0034321 FBtr0086756,FBtr0301546,FBtr0086757 2 3 3 84 2R 14181661 14181776 AATACCATGGTTGAAGCAATGG 59 14181821 14181839 GTTTCGGGATGCTAAACGG 59 NA Drosophila melanogaster 61 CG30122 FBgn0050122 FBtr0300924,FBtr0300923,FBtr0086660 2 3 4 88 2R 14524313 14524400 GGAAACTGCTGAAACTTCTACC 59 14524246 14524266 TTTCATCGTTTGCCTGTTCTG 59 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 1 4 4 142 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646372 14646455 AAATTGCTTAAACCCTGCTCC 59 NA Drosophila melanogaster 61 CG15094 FBgn0034392 FBtr0086636,FBtr0086637 3 2 2 102 2R 14682647 14682666 TATGCGGGTACACTAATGGG 59 14682502 14682582 CCGGATTTGTCTCATCCCA 59 NA Drosophila melanogaster 61 ena FBgn0000578 FBtr0086583,FBtr0114623,FBtr0100174,FBtr0100176,FBtr0086582 3 5 6 82 2R 15048908 15048988 GACCATTCTCAAGGTCAATGG 59 15049032 15049050 GCACAATCTCAGCCTTCAG 58 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290318,FBtr0086588,FBtr0086585,FBtr0290315,FBtr0086586,FBtr0290311,FBtr0290316,FBtr0290312 3 8 12 85 2R 15064177 15064196 GATTAGTCACAAGCAGTGCC 59 15064243 15064808 CCGGAAATGACGTTAGTTCC 59 NA Drosophila melanogaster 61 hrg FBgn0015949 FBtr0111010,FBtr0086484,FBtr0086483 3 3 3 83 2R 15554965 15555046 ATTGTGGGCAAAGAAGCAC 59 15554900 15554918 GTTCTGGCCACTAACATGG 58 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 2 1 2 70 2R 15671499 15671519 GCTACATTCGCATTGACTCTG 59 15671384 15671402 CTGTCTATGTTGGCTTGCT 57 NA DesignNoJunction Drosophila melanogaster 61 Obp57c FBgn0034509 FBtr0113099,FBtr0086292 1 2 2 80 2R 16391211 16391293 GTGGTCTCCATACAGAGTCTC 59 16391334 16391353 CTGGCTGATGTTATTGCTGG 59 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 1 4 4 89 2R 16557768 16557786 GATAAAGTTGAGCTGCCGG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273397 3 1 2 87 2R 16876697 16876717 ATGCTGATTACTCCATTCTCG 58 16876252 16876649 TTCATCTGCTTGTGAACACC 58 NA Drosophila melanogaster 61 CG3216 FBgn0034568 FBtr0273396 3 1 2 80 2R 16876690 16876708 ACTCCATTCTCGATCTGGA 57 16876566 16876649 CCGAATATACTTTGTGAACACC 57 NA Drosophila melanogaster 61 CG10543 FBgn0034570 FBtr0071525 2 1 3 104 2R 16888629 16888649 TCGTCAGGAATCTGTTCAGTC 59 16888715 16890627 ATGTGCTGCTACTGTTCGT 59 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0113369,FBtr0301897,FBtr0301900,FBtr0301898,FBtr0301895,FBtr0301901,FBtr0301896 2 7 15 120 2R 16910980 16910999 GCAGAACCTATCCAATGGAC 58 16911081 16911489 CAATTTGGACGTCAGTTCCT 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 1 6 15 93 2R 16907282 16907300 GAATGCCACGAAGAAGGAC 58 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 1 2 3 80 2R 17092793 17092873 CGCCTTCAAACAGTTCAGAG 59 17092914 17092934 GAGTTGAACTGAATCAGCCAG 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302704,FBtr0302706 3 2 8 126 2R 17186894 17191401 GGGAGTGAGAACATAAATCGC 59 17191489 17191507 TGGTAAGATGTCGGCTGTC 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 2 9 9 86 2R 17398741 17398921 CCAGAGGATTACGTCTATCCG 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG5819 FBgn0034717 FBtr0071811,FBtr0071812 3 2 2 105 2R 18183292 18183367 ACGACGCATACGAGATCTC 59 18183436 18183454 CAGGGCATCTTCGTAGGAG 59 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071849 1 1 4 182 2R 18195756 18199214 CTCCAACCGTCTAGATCTGG 59 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 CG3701 FBgn0034732 FBtr0302320,FBtr0071839 1 2 2 82 2R 18361845 18361933 TTCCTGGTGAACTTGGTCC 59 18361781 18361799 TACACTTTGGGCATCTGCA 59 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 1 8 8 101 2R 18612063 18612081 AGGGACAGAACATTCCCAC 59 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775,FBtr0302769,FBtr0302772,FBtr0302770 1 4 13 83 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817834 18817921 CTTCCAGCAACTCATTGCG 59 NA Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854,FBtr0112724 3 2 2 65 2R 19246474 19246494 GAGGAGTTCTTCTACAAGCAG 58 19246581 19246599 CTTAGGCTCCGTCTTGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 2 5 5 81 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484835 19484916 CGAGTACATGCCTTCATGC 59 NA Drosophila melanogaster 61 CG42559 FBgn0260761 FBtr0301260,FBtr0301259,FBtr0301258,FBtr0301261 1 4 4 80 2R 19487774 19487852 CTATGTTCTCAAACTTGCCTC 57 19487714 19487732 TTGACGATATCATTGGCGA 57 NA Nonspecific Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 3 11 13 83 2R 19562368 19562386 TTGCAGTCTGCAAGAAGAG 58 19562499 19562639 CCGCTACGCATCTATTAACG 59 NA Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 2 2 2 134 2R 19576225 19576468 GGATGTAAACACATTCAACGAG 58 19576561 19576581 ATGTAGAACATGTTCGATCCC 58 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 CG13562 FBgn0034928 FBtr0072135 3 1 2 195 2R 19791658 19791676 CTACGATCTCAGTGGCTCG 59 19791898 19791968 AAAGTTTGTGTACAGCCGC 59 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 1 2 2 80 2R 19938183 19938201 GGACGTTACCTTCATCGTG 58 19938245 19938325 GGATGGGATACCACTTCGT 58 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 3 4 4 92 2R 19941625 19941645 TCTCAGGTATTCTTCGTTGGA 58 19941484 19941572 GGACTGTTGACGTACATCTC 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 2 6 6 81 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287801 20287822 CAGATTTCTGTTGATGAAAGCG 58 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 1 4 4 90 2R 20420157 20420428 TGTTACGATGTCACCGGAC 59 20420482 20420500 TCAGGAAGATCATGGCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 2 4 4 81 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552191 20552386 GCATAAACTCATTATTGGCCTG 58 NA Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 1 5 5 80 2R 20770529 20770605 GCTTCCTGCAAGTGATAACG 59 20770648 20770666 AGTTCACTAGGATAGGCGC 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302575 1 1 8 80 2R 20879377 20879397 GAGGACATGATTGAATCGCAG 59 20879206 20879335 GGCTACTTGTATGGAGCGT 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0072398,FBtr0072399 2 2 8 88 2R 20887597 20887617 AGGTCATCCAATTTCTAGCCT 59 20885212 20885811 CGAGAAGTTAATGAGCACGG 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 3 2 3 129 3L 201053 201182 GAACCTAAGAGGCCTTCTCC 59 201274 201292 AACGTGACACTCTCGATCC 59 NA Drosophila melanogaster 61 wac FBgn0035120 FBtr0289972,FBtr0300711 3 2 2 65 3L 258741 258760 AGGGACGTAGTTATGTTGGA 58 258847 258865 GACGATATCCGGGATGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299987,FBtr0299982,FBtr0299981,FBtr0299986,FBtr0299983,FBtr0301552,FBtr0299984,FBtr0301553,FBtr0299988 2 10 10 80 3L 302294 302370 TGTGATGGTTACCTGCCAG 59 302411 302432 TATGTTGGAGAAGATAAGCCGA 59 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072543 1 1 6 118 3L 328344 352692 GTCATGTGTTTCTATCTGCAG 57 352838 352856 TTAAAGTCACCCAACTCGG 57 NA Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 3 1 1 60 3L 841053 841073 GGAAGATATACGCCATAGCCT 59 840962 840982 CTAGTGCTCTCCAAGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12090 FBgn0035227 FBtr0072705 1 1 3 133 3L 1527291 1527309 CAGCGATGCGACATATTCC 59 1526385 1527194 GAGTTCGTGAGTCCTCTCG 59 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 1 3 3 80 3L 1539067 1539086 CATCACGCTGATATGTCAGG 58 1539125 1539210 TGTCGAGGAAGACATCTATACAG 59 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 1 4 4 110 3L 1551790 1551871 TATGTGGACGAGATCGTCC 58 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 drpr FBgn0027594 FBtr0072799 2 1 2 80 3L 1716842 1716860 GAATCCCTCAAAGAGGAGC 57 1716540 1716799 CAGGTGATCGTATTCATCGG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 2 4 12 63 3L 2461250 2461268 ACGATAGATGCGGAATTCG 57 2465128 2465147 TTCCCGTCTTAAGAATGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776,FBtr0301580,FBtr0072975 3 4 4 161 3L 2925330 2925348 AAGGAGAACGTTCACGAGG 59 2925473 2940795 TATCACTGCGATAACCCGG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0113129 3 1 15 89 3L 3078041 3083747 GTGTATACGGCTGCTATGG 57 3083800 3085212 CGGCGTGACCATATAAGTG 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 2 7 13 128 3L 3588067 3593334 TAACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160 1 1 2 63 3L 3905509 3905530 CGTGTTGATATTGCTCAAACAG 58 3905613 3905634 GGATATCCCAGTATCCAAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 2 2 3 177 3L 3961677 3961695 GAACATCTGGAATGGTCCG 58 3959843 3959861 AAATCACCTTGCCATCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 1 3 3 81 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023619 4023699 TCCAGTAATCACTCCTCGC 58 NA Drosophila melanogaster 61 CG11594 FBgn0035484 FBtr0073283,FBtr0073285,FBtr0073284 3 3 3 85 3L 4023744 4023762 CCAGGATGTCCATGTCTGG 59 4023615 4023697 CCAGTCCAGTAATCACTCCTC 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303 2 1 6 80 3L 4095134 4095208 ATAAATAGGCTGAATCGCATCC 58 4095075 4095096 GTCTAACTCCTTCACCAAACAC 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 1 6 6 204 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG32248 FBgn0052248 FBtr0073304 1 1 1 84 3L 4471709 4471730 CGCCGGTCTAAGATATTATTCG 59 4471882 4471901 GTAGTTGTAGCCAGATTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 sif FBgn0085447 FBtr0112711,FBtr0112710,FBtr0112713 1 3 8 200 3L 5724548 5724566 AGCAAGGATTTGTACTCGC 58 5724730 5727550 AAATCCGGTAACTTGCTCC 57 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 2 3 3 80 3L 5753889 5753966 ATCACTTTGGACCAGGACAG 59 5754003 5754027 CATATAGCTCAGTTTGTCTATTGGG 59 NA Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 1 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 Ets65A FBgn0005658 FBtr0077054,FBtr0273355 1 2 3 83 3L 6093789 6093807 AAGCAGAGTGTGGAGAAGG 59 6093853 6094044 GTAGATGTCGCTAAAGGCAC 58 NA Drosophila melanogaster 61 CG13300 FBgn0035699 FBtr0077007 1 1 1 68 3L 6325573 6325591 TTCATGTTCGAGGGAACGA 59 6325246 6325264 GGACACGATGATCAGAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG10107 FBgn0035713 FBtr0076952,FBtr0076950 1 2 3 96 3L 6741026 6741046 AACTCCAATGGAAATCTCCAC 58 6740081 6740971 GGGAGAAATCTTTGTACAAGGG 59 NA Drosophila melanogaster 61 qm FBgn0019662 FBtr0076846,FBtr0302045 2 2 2 80 3L 7344758 7344778 GAAGTTGACGGCTATATTGGG 58 7344817 7344905 TTCTCCGTGTACTCTTTCAGAC 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0299721,FBtr0302557 2 2 3 60 3L 7460744 7460829 GCGAAATACGCATTTATGCC 58 7460852 7460870 GTCAGCATCATCTGCAACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 3 11 15 80 3L 7693645 7696960 TATGCTCCATTACAGGCGG 59 7693583 7693604 AGTCATTGACAAATGTCAAGGG 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0076768,FBtr0300413 2 3 4 86 3L 7921071 7921089 CTGACCTTCACCAACAAGC 59 7919924 7921024 CATGTCGTTATCGTTTATGCGA 59 NA Drosophila melanogaster 61 CG34462 FBgn0085491 FBtr0112768 2 1 1 61 3L 8322362 8322383 GCCAAAGTGAGAAACTATTTCG 58 8322453 8322474 TAGCCAAAGGAATATGTGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 3 4 5 183 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347117 8347135 GGGCTTGTGAGAGTACCAG 59 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 1 3 9 65 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350981 8350999 GACCGGCTTTGATCTTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 1 3 3 81 3L 8608092 8608116 CACTACGATGATCATTCTCTTTCTG 59 8608150 8608328 CTCCAGTTGATCTTTGTACTTCTC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156,FBtr0301158,FBtr0089561,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089568 2 7 13 85 3L 8620820 8627690 TTGTGAATCAGCCCTACCG 59 8627738 8627757 CAAGTAGGACTCTGTCGTGG 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 1 5 13 115 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630550 8630568 CTGGGATCGTACTGGACAG 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273288,FBtr0273291,FBtr0273290,FBtr0273286 2 7 7 80 3L 8900035 8900180 ACGTTTACGTGATAGGATGGT 59 8899975 8899993 CATCTCCTGCAAATGAGCG 59 NA InUTR Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 3 5 5 83 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986076 8986096 TTGCGGTTGTTAATCCTATCG 58 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 1 2 6 89 3L 9044291 9044309 AAGGAGAAGGTGATCGAGG 58 9043450 9044238 GTCTTGTTTGCCATCTCCT 57 NA Nonspecific Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 3 2 6 89 3L 9044291 9044309 AAGGAGAAGGTGATCGAGG 58 9043450 9044238 GTCTTGTTTGCCATCTCCT 57 NA Nonspecific Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0076526 3 1 5 93 3L 9069976 9069994 GTTCGACGCTTTCTTGTCC 59 9070049 9077594 GGTGTACAATGATTCCAGCAC 59 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0301699,FBtr0301698 3 2 4 129 3L 9346990 9347009 TTCGGACGTTTCATTCAGGA 59 9346313 9346840 CCAACATGTTGCGGATCTG 59 NA Drosophila melanogaster 61 MTF-1 FBgn0040305 FBtr0076460 2 1 5 119 3L 9423835 9423853 CTCGAACCGAAATTGGAGG 58 9423934 9428974 ATTTAAAGCTGTAGTCGCCTG 58 NA InUTR Drosophila melanogaster 61 fry FBgn0016081 FBtr0076417,FBtr0110843 3 2 3 94 3L 9657338 9660814 ACTTGAGTTTGAGCTCATCG 58 9657263 9657281 CAGTTTGTAGAGCGCTTGG 59 NA Drosophila melanogaster 61 CG6767 FBgn0036030 FBtr0076416 2 1 2 115 3L 9682384 9682402 CTTGCTTTCCATATGCCCG 59 9679555 9681641 CGCACGACTCCTAAATTTCC 59 NA Drosophila melanogaster 61 vsg FBgn0045823 FBtr0076400,FBtr0076401 3 2 4 178 3L 9707710 9708848 TTTGTGCGAAGAAGCAGTG 59 9708990 9709008 TCTTCTCAGTCGATGTGGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 2 7 8 96 3L 9817654 9817674 TCGACGATCAAATAACGAAGC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 iPLA2-VIA FBgn0036053 FBtr0076362 2 1 4 200 3L 9856706 9857300 GTTCAATGTTCTACAGCGC 57 9856524 9856542 GTATTGGAATCCGAGGTGG 57 NA Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 1 2 2 80 3L 11075673 11075691 GAGCATTTGGAGCAGATGC 59 11075550 11075633 CCGACAAGGTATATTCTGAAGTC 58 NA Drosophila melanogaster 61 CG6216 FBgn0036139 FBtr0076220 2 1 2 131 3L 11138439 11138460 GTGAAAGAAATCGACAAACGAC 58 11137497 11138348 AAGTATCAACTGGGTCTGGG 59 NA Drosophila melanogaster 61 CG11261 FBgn0036332 FBtr0075899 2 1 1 152 3L 13003078 13003097 CATGAACGATTTACGGAGCA 58 13002873 13002892 TTTCCGGTTTGTAAAGTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851,FBtr0075852 1 2 2 103 3L 13437395 13437476 CATTAAGCGAGATGAGCGAC 59 13437542 13437560 CTGCAACTCATCGAAGCTG 59 NA Nonspecific Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 3 2 2 85 3L 14583159 14583177 AGCAAACCAAGTATCTGGC 58 14577189 14583110 GAACCAGACCTTAACCTGC 58 NA Drosophila melanogaster 61 RecQ5 FBgn0027375 FBtr0100362,FBtr0075715,FBtr0075714 1 3 3 80 3L 14621498 14621576 TGATGGAAGCTTAGGAGATGG 59 14621438 14621458 TCGTTGTTTATCATCTGCAGG 58 NA InUTR Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300641 1 1 2 105 3L 14744867 14745808 TAATTGCTGCCAACCAGTG 58 14744780 14744798 ATTGAACCGTCTGGACCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 2 2 2 80 3L 15060072 15060614 TTACTCAGCAGAGAAGTCCT 57 15060011 15060031 GTAGATTTGAGTTGGGTCCAG 58 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 2 3 5 80 3L 15857119 15857139 TTATATTGGTGACGTCGTCCT 59 15853118 15857077 TTGTCACGCCTATCATCGA 58 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301575,FBtr0112852,FBtr0112851 1 3 7 154 3L 16059929 16063240 CTTCAAGTTGGAGGACATAACC 59 16063355 16063436 AAGCATTTAGTGCGATGGG 58 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 3 3 6 88 3L 16109265 16109284 ATAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 CG16838 FBgn0036574 FBtr0089713,FBtr0089714 2 2 2 154 3L 16126325 16126398 CAAAGGGCAAAGAGACTGC 59 16126514 16126534 ACAATTTGGTTCTGTGCATCC 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0075267,FBtr0075269 1 2 7 114 3L 16952970 16953641 ATCAGGAGCTACCAGTCAC 58 16953719 16953737 CATCTTCGTTAGCACGACG 59 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 2 2 5 80 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978436 16984130 GTAGTGGTCTGAGTCATCCTC 59 NA Drosophila melanogaster 61 CG9666 FBgn0036856 FBtr0299974,FBtr0074991 2 2 2 87 3L 19258466 19258484 CATGGACATGCGGTTTCTG 59 19258535 19259703 AATGTACGACCGTGTTGAC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Fibp FBgn0036911 FBtr0089595,FBtr0089596,FBtr0089594 2 3 3 80 3L 19809755 19809832 AGGAGATTAAGCACCTCGTC 59 19809694 19809713 GAAAGTTGCCATCCAGTTCG 59 NA Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 1 2 2 123 3L 19811659 19811677 GAGCTGCACCTGAATAGGA 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074889 1 2 6 85 3L 19841491 19851488 AAAGAAGGTGCCTACAGGT 58 19851537 19851555 GAGTCCCAAATTCTTGCCG 59 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 3 2 2 80 3L 20439490 20439854 AATTTAACGGCTCAAGAGGTC 58 20439896 20439914 CGCCTAGGCAATACTTTGG 58 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0078222,FBtr0300452 1 2 2 78 3L 20465759 20465777 TACGACGAGTCTGACTTGG 58 20464207 20464227 CCTGCGTTCCAATTATTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 AcCoAS FBgn0012034 FBtr0078413 1 1 3 111 3L 21266784 21272587 TAGCCTACTACTGGGAGGG 59 21266691 21266709 ATGCCATGATCCTTCAGCA 59 NA Drosophila melanogaster 61 CG9063 FBgn0028500 FBtr0078512 2 1 1 118 3L 22253760 22253778 CATCGTGAATGTATGCGGC 59 22253410 22253428 AGTGTGACAGCCAGAAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509 2 1 2 122 3L 22297622 22300657 CAATAATGGAGGAGCCCGA 59 22297518 22297537 ATGTTCCAGTAGCTGTACGG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148 2 1 2 80 3L 23017255 23018190 GGCGCCAGGATAAATATCTC 58 23022950 23022968 CGGTTCCCTTAGTGAAGAC 57 NA Drosophila melanogaster 61 CG17698 FBgn0040056 FBtr0111168,FBtr0111167,FBtr0111166 3 3 3 90 3L 23741463 23741536 CCCAGTTAAAGACTAGTAAATGGG 59 23741584 23741603 TCGTCTACTTGTACCAAGCA 58 NA Drosophila melanogaster 61 CG14642 FBgn0037222 FBtr0089687,FBtr0089688 2 2 2 103 3R 67637 67714 TACATCCATATACGAGGCGC 59 67553 67571 CTTGCTCAATCCGAAGCAG 59 NA InUTR Drosophila melanogaster 61 MED31 FBgn0037262 FBtr0078856,FBtr0078857 1 2 2 81 3R 468366 468479 CCAACTATCTAAACTTCCTTGC 57 468519 468539 CAGTACTGCAGATACTTCAGG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300909,FBtr0078675,FBtr0078672 3 3 12 93 3R 1586674 1587377 ATTCGGACATCAAATCGTGG 58 1586600 1586620 GTTCTTGCTGTTTAGGGATCG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0301946 1 1 9 80 3R 1827454 1827800 TTATAGCACCAAGAAGACGTG 58 1827394 1827412 ATGGATGTAGTCCTCGCTG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0078650,FBtr0301947,FBtr0078652 3 3 9 133 3R 1833863 1833882 CGAAACCAGATTCAGACGAC 59 1830839 1833767 GTGTGGTGCCATTACTCCT 59 NA Drosophila melanogaster 61 CG31286 FBgn0051286 FBtr0081682 2 1 2 165 3R 2467549 2467632 GCGACGCTAACATAAATGCT 59 2467811 2467829 TTATCCTGACGACTCGCAC 59 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 3 3 3 159 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651400 2666963 CATTCACAGTACTCGTCCC 57 NA Drosophila melanogaster 61 rn FBgn0259172 FBtr0299637,FBtr0300518,FBtr0299639 3 3 4 183 3R 3100073 3100727 GGAGGATATTGCCTCGACC 59 3099908 3099926 GTTCTTGTTCGGGAAGCTG 59 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081550 2 1 2 97 3R 3346786 3346864 GGGCTTTGGGATTTATGAGTC 59 3346709 3346728 GTTCTTGATCCACTTGAGGG 58 NA Drosophila melanogaster 61 Sp7 FBgn0037515 FBtr0081740,FBtr0081742,FBtr0081741 1 3 4 157 3R 3588103 3588184 GAGTACGTGGATAACAGGG 57 3588374 3588392 TTGCTGGTATCGTATTCCC 57 NA Drosophila melanogaster 61 DNApol-iota FBgn0037554 FBtr0081798,FBtr0081797 2 2 2 83 3R 4060874 4060892 GTAAGCCAATATCCGTGCG 59 4060939 4061021 CATCCTCTGCAACTTGCTC 58 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 3 3 3 112 3R 4564427 4564515 CTAAATATCTGGAGGGCCGA 58 4564334 4564353 TCCAGCTTCGTATGTATCCA 58 NA Drosophila melanogaster 61 CG8359 FBgn0037634 FBtr0081919 3 1 1 122 3R 4632205 4632223 CATAACCGCGAACTCAGAG 58 4632361 4632380 TTTCCAACGTTTGAGCAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 pyd FBgn0003177 FBtr0089783,FBtr0089784,FBtr0112822 2 3 8 80 3R 4660660 4664122 GAGTCTAAGGTACCCTACGAC 58 4660600 4660618 GATGCTGTACTTGCTGGAG 58 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 2 2 4 96 3R 4766832 4766852 GAATCTGTATGACCTGTTCGT 57 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 skap FBgn0037643 FBtr0301786,FBtr0301787 2 2 4 96 3R 4766832 4766852 GAATCTGTATGACCTGTTCGT 57 4766910 4767143 ATCCAATGCGAAGAAGCAG 58 NA Drosophila melanogaster 61 CG8866 FBgn0037679 FBtr0082055 2 1 2 182 3R 5158554 5158572 AGTCCGTCCATGAAGACTG 59 5158333 5158408 CATCCAGAATTCCAGCTGC 59 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082208,FBtr0082207,FBtr0082206,FBtr0082211,FBtr0082212,FBtr0082210,FBtr0273185 2 9 9 80 3R 5845281 5845302 GTTTATTCCCGAACTCAAGGAG 59 5845149 5845242 GGACGATAGCGATTGATAAGC 59 NA Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 3 3 6 133 3R 5930725 5930801 TTCGAATCAAGATCGCTGG 58 5930610 5930630 CGACAGATGATACTCCAACAG 58 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 1 5 5 80 3R 6041341 6042794 GGTGGATGAGATATCCGAGC 59 6042836 6042855 TACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 Takr86C FBgn0004841 FBtr0082315,FBtr0112789 3 2 2 80 3R 6565219 6566919 GACCAAGCACTATTACAATGG 57 6565159 6565178 GCCATAGAAGTGGGATATCG 57 NA Drosophila melanogaster 61 nocturnin FBgn0037872 FBtr0113218 3 1 3 84 3R 7031326 7031344 ATTAAGCGAGCCAACAAGG 58 7031389 7032641 TAAATGAACCCATTCTGGTCAG 58 NA Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100320 1 1 3 97 3R 7390428 7390518 CATTCATCTTTCGGCGTCG 59 7390349 7390367 GTCAGGGTGTAGGTATCGC 59 NA Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041 3 1 2 80 3R 7717452 7717471 ATGTATTTGGCAGGGTCTCC 59 7717510 7717600 GACTCAACTTCAAAGGTCTAAGC 59 NA Drosophila melanogaster 61 KLHL18 FBgn0037978 FBtr0082556 1 1 2 80 3R 7835852 7835971 CCCTAAAGGTTGAAGATCAGAC 58 7835793 7835814 TGAACATCGCATAGAAATACGG 59 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 2 2 3 92 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115990 8116009 TCTATGGGACAGTTTCTGCT 58 NA Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 3 2 2 180 3R 8175695 8175925 CTAGCCAACCAAATCCCAG 58 8175533 8175552 CGGCTTTAACGTATCCACTG 59 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 1 2 2 80 3R 8484657 8484734 CCTGTGATTAAGTCATACGCC 59 8484773 8484794 AATGCCCAGACTAATCTTTGAG 58 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 2 2 2 80 3R 8484658 8484735 CTGTGATTAAGTCATACGCCG 59 8484773 8484795 CAATGCCCAGACTAATCTTTGAG 59 NA Drosophila melanogaster 61 rin FBgn0015778 FBtr0082799,FBtr0082797,FBtr0082798,FBtr0082800,FBtr0082796 3 5 5 138 3R 9476209 9476539 CAACAAGGGTGACTTTGAGC 59 9476640 9476658 GACATTTCCGAAGCGTGAG 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 3 8 8 146 3R 9487574 9487894 GCTTTGTGGAATTCGAAGAC 57 9488068 9488086 CATATCGATCGTCGTAGCG 58 NA Drosophila melanogaster 61 rdx FBgn0086364 FBtr0301632,FBtr0100852,FBtr0301634,FBtr0301633,FBtr0100361 3 5 5 81 3R 9796343 9796683 CTACACGCAGGTCAAAGTG 58 9796280 9796298 CTCACCCATTTCTTCCCGA 59 NA Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 3 2 2 85 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707627 10707645 GTCGATCGATGATTTCCGT 57 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089959 1 1 13 99 3R 11126776 11126795 TCAACACCCGTCTAAAGGAG 59 11128936 11130909 ATCATCTCGTCTTCGAGCC 59 NA Drosophila melanogaster 61 FK506-bp1 FBgn0013269 FBtr0083120 2 1 1 88 3R 11158365 11158383 GACCTGAACTTCAGCAAGG 58 11158228 11158246 TCAATGTCGTGCAAGTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 2 4 4 80 3R 11217397 11217416 TCCACGATGAGTCCAAATCC 59 11217456 11218027 ATCACCAAATACCTTGATCGTG 58 NA Drosophila melanogaster 61 CG18519 FBgn0038348 FBtr0083153 2 1 2 99 3R 11366293 11366382 GATCTTATAAGATCTTGCCCAGAG 58 11366217 11366235 GAGTGGACAATCCTGTGCT 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0083265,FBtr0083263 1 2 9 80 3R 12121525 12122390 CTGATAGCTATACAATTACTCCACC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083334 2 1 6 98 3R 12460104 12461279 GTTTATGAACGAGAATGCTGAG 57 12461338 12461356 GTCAGGCTATTGATGTCGT 57 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 3 5 5 81 3R 12755407 12755426 CAATGCGTATGTTTCCAAGC 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 1 3 4 80 3R 13301993 13302198 GCTATTACAACACGGAAGATGAG 59 13301935 13301953 TCTTTGAGTGTCCTGCCTG 59 NA Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 1 2 2 88 3R 13362402 13362420 AGACAACTCGAGCTGTCAG 59 13362544 13362562 GTCTTTCCCGAGATTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14321 FBgn0038540 FBtr0083511 3 1 1 102 3R 13559437 13559455 TGGAATGAATGGCAAGCTG 58 13559603 13559621 CTCCAGTTCGTGGTAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582 1 1 3 167 3R 14205076 14205942 TCACCGAGACAAAGATGGA 58 14204669 14204687 TCGTCTCCTTGACGATCTC 58 NA Drosophila melanogaster 61 CG12269 FBgn0038665 FBtr0083722 3 1 1 83 3R 14804366 14804387 GGTAATCTCATCAAGAGCATGG 59 14804229 14804248 CTCATCGGAAATGGTGACCT 59 NA DesignNoJunction Drosophila melanogaster 61 bnl FBgn0014135 FBtr0300123 2 1 2 81 3R 15621986 15622004 CGAGGACTCAAGTTCCGAG 59 15621225 15621941 GGACAACAGTCCGAAATCG 59 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 2 3 3 85 3R 16042880 16045581 TGGAAATAGGAATGAAGCCG 58 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302671,FBtr0302673,FBtr0302670,FBtr0302667,FBtr0302672,FBtr0302669,FBtr0302666 3 8 8 80 3R 16148794 16148812 GACACTAACTCGGACTCCA 58 16148854 16148946 CAAAGCAAGTTGCTTAATGGC 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 2 6 8 104 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576073 16578083 CAGCATTATGATGCTTCGCA 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299719,FBtr0299718,FBtr0299720 3 3 3 82 3R 16678288 16678430 TTGTTACAACAGGGAGGCA 59 16678224 16678242 ACGATAACCACGATCCACC 59 NA Drosophila melanogaster 61 Ir93a FBgn0259215 FBtr0299718 2 1 3 80 3R 16685188 16685209 AACTTCAATTCTACTGATCGCC 58 16685071 16685148 ACGATGGGTACCATTAGAGC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089514,FBtr0089516 3 2 9 81 3R 16794198 16798904 GTCAACGAAAGGTTGATTTCG 58 16798945 16798965 TGACGAAGTACACAAAGAAGC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084074 2 1 22 90 3R 17197785 17200795 CACAGAGGCTCAAGAGGAC 59 17197713 17197732 GTGGCAGTTGTACATGTAGC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084063 1 1 22 80 3R 17200825 17200846 CCAGAACTACAGTGAATCATCG 59 17179441 17200787 TGTCCGTAATCGAATTCTTGAG 58 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0301211,FBtr0084112 2 2 5 81 3R 17350301 17350319 GGAGACTATACTCGCACCG 59 17350361 17351259 CCAAATAATAACGATTGGCGGA 59 NA Drosophila melanogaster 61 CG42335 FBgn0259237 FBtr0301691,FBtr0299852 1 2 2 80 3R 17585997 17586015 ATGTGGCGAAATCTCATGG 58 17586056 17586200 TGTATTGGTCAAGTGGTATTGC 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 2 4 6 90 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615473 17616439 GCACGAATATAAGCACCGG 59 NA Drosophila melanogaster 61 CG31174 FBgn0051174 FBtr0084154 3 1 1 65 3R 17694776 17694794 CCAATCCCGATATGGAGGA 58 17694673 17694694 ACATTTCCACTTGATCCTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 3 2 2 81 3R 18113613 18113631 CGCGTAGAGGTCTTATCGT 59 18113676 18115213 CGATCATGAGATCTGGCGT 59 NA Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 1 4 4 146 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084335 1 1 3 110 3R 18515886 18515963 ATCTGGAAGATCGTGCCTC 59 18515794 18515818 CACCTATGGAATTATCGAGTAACTC 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084512,FBtr0084511 1 2 2 159 3R 19779095 19779180 GAATAACGTTGTCCGCTGG 59 19778954 19778972 CAGATGGGTGTACACCAGG 59 NA Drosophila melanogaster 61 Aats-glupro FBgn0005674 FBtr0084511 2 1 2 89 3R 19782928 19782947 GGCCTATGTGGATGATACCC 59 19782710 19782877 TTCTCGACAGAGTTGGATCG 59 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 2 2 3 190 3R 19812925 19813002 AGTAGCAGAAGACGATTAGAGG 59 19813152 19813171 TGTTGTAGTGGGAGTTGGAC 59 NA InUTR Drosophila melanogaster 61 CG13606 FBgn0039161 FBtr0084553,FBtr0110794 3 2 2 70 3R 19998827 20006028 TGAAATTCTTAGTCACCATCGC 59 20006059 20006077 CAGAAAGTATTGCTGGCCC 58 NA DesignRelaxed Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084570,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 6 6 80 3R 20025044 20025063 CTAAGACTATGTCCGAGCTG 57 20024922 20025002 TGATCAGCGTAAACTTGGAC 58 NA Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 2 2 2 109 3R 20358516 20358594 CCAACCGATGCTAACATTATACC 59 20358663 20358681 ATAATGGCTGGTCGAAGCA 59 NA InUTR Drosophila melanogaster 61 CG42331 FBgn0259233 FBtr0299842,FBtr0299843 2 2 2 82 3R 20607107 20607180 ATGACTTCGCTAACGTGGT 59 20607226 20607244 AAACAGATCGATGTCGTGC 58 NA Drosophila melanogaster 61 Ela FBgn0013949 FBtr0084709 3 1 2 122 3R 20691277 20691296 ACTTTATCCTGGCCTTGGTC 59 20691381 20691459 GGAATCTGGTGACCTCTGG 59 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 2 3 3 84 3R 20863985 20864006 GTTCAACTTCAAGGAGAATTGC 58 20862429 20863943 TCTATATGAATCATGGTTGGCG 58 NA Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 3 7 7 147 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898163 20898181 CCATTGGATAGCAACAGCG 59 NA Drosophila melanogaster 61 CG11858 FBgn0039305 FBtr0084815 3 1 1 75 3R 21088561 21088579 AAAGGATGCAGGGAAAGGT 59 21088677 21088695 ATTGCCTCCCTTCTTCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084977 3 1 2 81 3R 21877634 21877710 CCAAGGAGATATCACATCTCG 57 21877573 21877591 ATGGTGGCCAGAATATTGC 58 NA Drosophila melanogaster 61 RpL34a FBgn0039406 FBtr0302369,FBtr0084973,FBtr0084972 2 3 3 86 3R 21884732 21884750 CTCTGAGACGACGTCTGTC 59 21884602 21884620 CGTACTGGTACACCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100337,FBtr0100340,FBtr0100339,FBtr0085093 1 4 9 161 3R 22699730 22699802 AACAGCTACCACACTCCTC 59 22699587 22699605 CTAGCGGCGATATTTGCTG 59 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085137 1 1 12 98 3R 22892596 22892851 TCTTTAATACGTCCGCGGA 58 22892516 22892537 TCGGAGATTGATTCTGATTCTG 58 NA Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193 2 1 2 86 3R 23136548 23136566 ATCATAGCCTCCAAGGTGG 58 23136423 23136498 AAAGCAATCCTGGTCATCG 58 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 3 5 5 149 3R 23529755 23529774 GATCCGATGTACACCAAGAG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 1 3 3 81 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758239 23758257 GCAAACCTCGATCACAGAC 58 NA Drosophila melanogaster 61 CG34362 FBgn0085391 FBtr0301397,FBtr0112582 1 2 3 95 3R 23869490 23901409 GCTGCACAAACAATTCCAC 58 23901468 23901486 GAGATTTCGCCGAATGGTG 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085302,FBtr0085298,FBtr0085303,FBtr0085299,FBtr0085301,FBtr0085300 1 6 6 65 3R 24426903 24428497 TGGACAAAGTTGTGTTGCA 58 24428526 24428544 AGGCCTTCTTTACGTCCAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0085324,FBtr0085322,FBtr0113301 3 3 6 161 3R 24637863 24638121 TATGGAAAGTCCAGGTCGC 59 24638463 24638482 TCCTCTTCCTGAACCATGAC 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 3 2 4 90 3R 24941219 24941298 CCAAGAAGGGTATTGAGGC 57 24941352 24941370 TGGGTCTTTCGTACAGAGG 58 NA Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 1 2 2 80 3R 24970924 24971003 ATCAAGACCTACATGGGCTC 59 24971046 24971064 GAACTTGGAGTTGAAGCCC 58 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 1 3 3 108 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046232 25046250 GAACTTGAAGTTGTCGGCC 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 Mgat2 FBgn0039738 FBtr0085602 1 1 2 92 3R 25843411 25843430 CAAAGTAGCCATAGCAGCAG 59 25842588 25843358 GACCTCCACCTTCTGATAGAC 59 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0085565 2 1 2 80 3R 25935493 25935579 ATCACATCAAAGAGTCCCGA 58 25935621 25935640 AGAGAAGTCATCCTCCTGTG 58 NA Drosophila melanogaster 61 CG1342 FBgn0039795 FBtr0085698 2 1 1 71 3R 26517466 26517484 ACCTACCTTCTGTCAGTCG 58 26517608 26517626 TTAGGGCAGACGTGATGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Aph-4 FBgn0016123 FBtr0085734,FBtr0085733 2 2 2 114 3R 26877545 26877563 CCTTTAATGGTTACGCGCT 58 26877641 26877719 CAATAGCCAGGACCATTGG 58 NA Drosophila melanogaster 61 CG1607 FBgn0039844 FBtr0085786,FBtr0085785 2 2 2 80 3R 27214966 27214986 GAGAATACGGACACGAAAGTG 59 27215024 27215112 CAAGTAATTCCATCCGTTGTAGG 59 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 2 5 5 80 3R 27426314 27426404 TACATGAGGATTCCTGATCGC 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 2 6 6 85 3R 27553964 27554122 GGATGATCTAAATGAAAGTCGC 57 27554168 27554186 CTTCATGATGGCTCACCAC 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300266,FBtr0085881,FBtr0300263 1 3 22 81 3R 27707585 27757803 GACCAATAATCGCGGAAGC 59 27707522 27707543 CAGGTCCTGATTGTTATTGTCG 59 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301250,FBtr0301249 2 2 4 134 3R 5377425 5377444 AGCAATTTGGACTCGATAGG 57 5375420 5375440 TGATCGGTATTCGTTTGAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 1 6 6 81 4 139393 139471 CATTTAGGGTTTCTGGTGTCG 59 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0089447,FBtr0113417,FBtr0089445,FBtr0089449,FBtr0089448,FBtr0089451,FBtr0089446,FBtr0089450 3 8 8 168 4 157779 157853 GTCGAGCAACCTTAAGACAC 59 158041 158060 ATAAACCAATTGCTTGCAGC 58 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 2 7 7 80 4 208669 208693 GGTATTTAAGACATATACACTCCCG 59 207457 208633 GCATTTCCACCTTATGACCTC 59 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089112,FBtr0089114,FBtr0089113 2 3 3 108 4 231104 231195 TAGGAACAGCTGGTACTTTGG 59 231262 231283 TGCTATCGAGTTACTATCACGG 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 2 4 4 81 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383642 TGTAGAACTGTGCAACGAG 57 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089993 2 1 4 189 4 580914 581005 ATCTCAGGATCAAGGTTCCTC 59 581349 581367 ACTTCGTCTACCATCAGCG 59 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089082,FBtr0089083,FBtr0089084,FBtr0089086 3 4 6 109 4 640793 640889 ATGCTCAACAGATATCCAGGT 59 640960 640978 TATAGTGTCGAGTTGCCGG 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 1 2 5 144 4 886674 886692 CTTGTTCGATCGGAACTGC 59 886490 886566 AGGACGAGAGTTATTGCCA 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 1 6 6 100 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974433 974453 CTGAAGTAGGAGTAAATGCCA 57 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 3 6 6 101 4 974514 974653 CTCTCAAGAATTGCATTCGC 57 974432 974452 ACTGAAGTAGGAGTAAATGCC 57 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0089226,FBtr0089223,FBtr0089225,FBtr0089224 3 4 5 112 4 1037084 1037102 GGATTGCGACACAATTGGA 58 1036235 1037014 CTGTTCTCCACTCTAAATCTAAGTC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 2 2 9 141 4 1059053 1060649 GTGCTCTTCAGCTAGACGA 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 1 2 4 194 4 1207178 1207198 CTTTCGGAAATGGATTACCCT 58 1208238 1208379 CCTTCTCAGGTATTGTAGATCG 57 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091471,FBtr0091472 2 2 4 195 4 1207177 1207197 TCTTTCGGAAATGGATTACCC 58 1208238 1208379 CCTTCTCAGGTATTGTAGATCG 57 NA Drosophila melanogaster 61 cin FBgn0000316 FBtr0070064,FBtr0070065 2 2 2 60 X 151447 151517 AACATAAAGCCAGGGAAGC 58 151535 151559 GACCAAAGAAGTACTTATCTTTCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 2 2 2 90 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505985 506004 AAGTATTGGTTCCCTGTCCG 59 NA Drosophila melanogaster 61 mod(r) FBgn0016038 FBtr0089725,FBtr0089726 2 2 4 85 X 516383 516478 CATATCAGGGAGCTTCTTCAG 58 516524 516543 GTCTTTCCGTTCAGGAAGTG 58 NA Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 1 1 1 92 X 822454 822472 GATTTCGAAGACCACGCAG 59 822592 822610 AGCTTCATCAGAGACTCGC 59 NA DesignNoJunction Drosophila melanogaster 61 MED22 FBgn0040339 FBtr0070165 3 1 1 107 X 822300 822319 CTGAAGTCCTATAATGCGCG 59 822445 822463 CTTCGAAATCTGGCTGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 br FBgn0000210 FBtr0070266 1 1 9 87 X 1531148 1531166 AATATCGATCCCTCAGCGT 58 1531361 1537112 CACTTGTGATGGCTTGAGG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070503,FBtr0070502 1 2 2 131 X 2590878 2590957 GATTCATTTAACCAAATGGGCC 58 2590768 2590792 GTAATCTACAAATTCCTTCACCTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 1 3 3 106 X 2609222 2609240 GCTCTGTAACTCCTCCGAC 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 3 1 1 60 X 2627169 2627187 GGTTAGAAAGATCCGAGCC 57 2627271 2627289 TTCCTAGCCAGTTGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301823 2 1 7 90 X 3593511 3593729 CCGACAAAGTTTGTCTGGC 59 3593780 3593801 CCTGCATCGAATAGAATTGTGG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 1 1 1 69 X 4275985 4276003 GACCAAGAAGATCCAAGCA 57 4277106 4277124 CGGAGTGTCCTCTAAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 bi FBgn0000179 FBtr0070672,FBtr0300609,FBtr0300608 3 3 3 83 X 4345058 4372189 GGATTTGTAAGTACTACGATCCTG 58 4372230 4372249 CTTCAGGATGTCATTGGCTC 58 NA Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 1 2 2 80 X 4551096 4551186 TCAAGCTGAATACCGAATTGAG 58 4551227 4551245 AATCATCCTCCGAATCGCT 59 NA Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 3 2 2 108 X 4793474 4797986 TGACCACAATTGGCTATGGA 59 4798057 4798075 CTGCTCAGGTAGACCAAGG 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0301880,FBtr0070753 1 4 4 80 X 5215903 5215921 CGTATCAGGAGCTGAATGC 58 5215760 5215862 CATTCAGTTTGAATGCGATTCC 59 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0300467,FBtr0301953 3 2 7 82 X 5277608 5277626 GGGAACGGTTCTATTGGTC 57 5277669 5288096 CATCATGAAATCTTTCGCACTG 58 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 1 4 4 80 X 5317038 5317158 AGAACACTACCAGACACCTC 58 5317200 5317219 CACTCATAGCACCAGATGTC 58 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 1 2 2 117 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567273 5567291 ATCACAATGTAGACGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 Lag1 FBgn0040918 FBtr0070937,FBtr0070938 2 2 2 80 X 6160489 6160508 CTACAAGGACCTCATATGGC 57 6153746 6160447 GATATCCAGAAACGCTCCAG 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 3 3 3 142 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766822 7766840 CCAGAATCGAGTAGGCTGG 59 NA Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071112 1 1 3 140 X 7987884 7987902 CAATAACACCACCCACGAG 58 7984135 7984153 ATTCGTCAACTCTCACTGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 2 4 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442550 8444125 TCATTCATGCCTGTATCGC 58 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 3 4 6 82 X 8442488 8442506 GAGTTCAGCGAACAAACCG 59 8442550 8444127 CTTCATTCATGCCTGTATCGC 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302663 3 2 6 93 X 8917821 8918118 GGATTCAGCCCTATACTGGA 58 8918296 8918315 CTTGTTCATGTAGTGCACGT 58 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 2 6 6 84 X 9524045 9524065 CCGTCGGATTATATTAATGCG 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 CG17255 FBgn0030205 FBtr0071461,FBtr0071460 3 2 2 112 X 10359274 10359629 ATGCAAGACTCGATGGGTC 59 10359180 10359198 CCGTAGTTCTTGTGATGCG 59 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073444,FBtr0073441,FBtr0073443,FBtr0073442 2 4 4 102 X 11055658 11055676 CAACAACTCGATCGACGAG 58 11055742 11055824 GTAGTCCGTCTTTGTGACC 57 NA Drosophila melanogaster 61 mamo FBgn0085375 FBtr0112555,FBtr0112554 2 2 2 81 X 13779523 13795523 CCCATAAGGTGGTCCTCTC 58 13779460 13779481 ATCACAATTAGATGTCCTTCGG 58 NA Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 1 2 2 126 X 14127233 14127251 ACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 3 2 8 122 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820887 14824780 CCCAATATGGCTCTCAAATGTC 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 1 2 8 120 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820885 14820906 CAATATGGCTCTCAAATGTCCT 58 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 1 1 2 178 X 14771606 14771727 GAACGGATCCCGTAGATCC 59 14771217 14771236 CGAGATCTCCGTTTCATCAC 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 2 6 6 81 X 15722903 15722993 TGTACAAGGGAAATAATCGCTG 58 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 3 5 5 81 X 15749871 15749891 TCTATAATCGCGTTGGAATGG 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 1 6 6 276 X 15755488 15755506 ATCCGACTAAGCTACTGGC 59 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG8916 FBgn0030707 FBtr0301232 1 1 2 80 X 15816164 15816514 TATAATCGGATTTATGGCGCAC 59 15816551 15816573 GGTCCCATGGTCTTAATATACAG 58 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 2 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 1 4 4 80 X 15896969 15896988 CCAAATACGGTGTTTCCCTG 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242,FBtr0074244 2 4 4 80 X 16188199 16188217 TCAGTGACATGTACTCGCC 59 16188063 16188156 AATGAAATTCCCTGTGCAGC 59 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 2 2 2 94 X 16534257 16534340 AAATACATGGACAAGCGCA 58 16534181 16534199 AGGACCACGTTCATGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354,FBtr0074353 3 2 2 194 X 16693341 16693359 GTTCGATCTGAATGTTGCG 57 16692942 16692960 GAGCCTTTGTTCTTGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474 1 1 2 101 X 16700493 16700513 TTAAAGTACATCGCCGAAGAG 58 16700573 16700649 ATATGAATTTGTCCGCGATCTC 59 NA Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 3 2 2 114 X 16999008 16999523 AAGTTAAGTCGGAGGTGGAC 59 16998913 16998932 GTATAGAGCTCCTGCTGACC 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0300436 2 1 3 230 X 17385715 17395030 TGGAGATGGTGAGTAACTCC 58 17358808 17358826 CAATGAACGAGGTCTGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074471,FBtr0074469,FBtr0074470,FBtr0074468 3 4 4 102 X 17743515 17743536 CTTCATAATCATCTGGCTGGTG 59 17743366 17743452 CTTGTAGACCAGCCTAGGC 59 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 1 3 4 112 X 17743835 17743950 CTTGAACAAGTCCCTGGAC 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300509,FBtr0300508,FBtr0299619 3 3 4 178 X 17767427 17771467 GAATAAACAGAAACTGTCCGC 58 17766768 17766786 AAGACGAGGGACTAGAGTG 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074520 2 1 7 80 X 18000953 18006604 GGATGTTGAGATCAACGATCTC 59 18000829 18000847 GAGACCTTCTTCAGGGCTG 59 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 1 3 3 89 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 3 2 2 93 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584936 18584955 ATGTAGGTCATCCCGAACTG 59 NA Drosophila melanogaster 61 CG7990 FBgn0030997 FBtr0074694,FBtr0074695 3 2 2 128 X 19093399 19093417 CTTCCATGAACTGTGCGTG 59 19092798 19093309 GGTATAATGTTGTAGACGCGG 59 NA Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 1 2 2 143 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461955 19461973 TTTCAACGTTGTCGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0091462,FBtr0070033,FBtr0100196,FBtr0091461 1 4 5 80 X 19905588 19920751 CTGTCTACTTTCTGGTAAATGGAG 59 19905531 19905550 AGCATATCACATCCATGGCT 59 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089398 2 1 13 80 X 20105881 20105899 TCTACACAAAGCAGACCCA 58 20101662 20104508 CGTCGTCTCCATAATAATCCG 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089406 1 1 13 93 X 20105914 20105932 AGGCTACGAACATTCCACC 59 20105455 20105857 CAAGAAAGAACATCGCCGT 58 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 1 2 2 80 X 20347079 20347097 GTGAAGCTGGAGATCAAGG 57 20346947 20347038 AAGTTCTATCACATTGTGCTCC 58 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0077241,FBtr0113007 2 2 2 105 X 20906738 20907434 ATTTCTATAGCGCTACCGAC 57 20907567 20907588 GTAATCTTCTGAAAGCTCAGAC 57 NA Drosophila melanogaster 61 bves FBgn0031150 FBtr0077247,FBtr0077246 1 2 2 80 X 20947145 20947169 GATACTAAAGAAGAGTGTGGATGTG 59 20947207 20948007 AAAGGAACATGCTCGTCCT 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 2 4 4 110 X 21313528 21313546 ATTGGTGGGATTAGGAACG 57 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 CG17450 FBgn0040028 FBtr0070057 1 1 2 123 X 21479655 21479673 GAACCGCATCTTCGATCAC 59 21478878 21479568 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 CR18275 FBgn0029523 FBtr0070097 1 1 1 137 X 373155 373173 CGCTCCATTACAGGAAGGA 59 372993 373011 TAGAAGCTTGGTGCTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17167 FBgn0039941 FBtr0300807 1 1 2 168 XHet 47479 51924 GTTACTCAGGCCAAAGCAG 58 52055 53589 GTTGATCCACCGTAAACAGG 59 NA Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 2 5 5 60 XHet 66315 67541 CTATAGCTGCACGATTGCC 58 66273 66291 CTGTCCTCTACATCCACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mir-87 FBgn0046814 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:I:49Fc FBgn0011883 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-8S FBgn0082172 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R2:84Fa FBgn0011959 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:Y1:85Ad FBgn0012027 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32518:Psi FBgn0052518 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 0 0 0 0 0 0 0 0 0 0 NA Drosophila melanogaster 61 su(f) FBgn0003559 FBtr0113733,FBtr0113732 1 2 2 80 XHet 77302 77323 GAAGGACTATATCGCATTCGAG 58 77361 77440 ATGTAATCCTTAGATCGCTCCA 59 NA Drosophila melanogaster 61 CG13865 FBgn0039965 FBtr0111192 2 1 2 61 X 22415904 22415922 CAAAGTCCATGCCTAGGGA 59 22416291 22416309 TTTGGTCAGAAACTCCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 2 5 5 80 X 21228146 21228164 GGAGAGCTACAATGTGGTG 57 21228206 21228295 ATGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 fliI FBgn0000709 FBtr0077192 3 1 1 99 X 21214671 21214814 GCTTACAGATTCTCAACGAGG 58 21214875 21214893 TAGTTCATGTACTCGGCGT 58 NA Drosophila melanogaster 61 stg1 FBgn0064123 FBtr0091649 1 1 1 80 X 20979254 20979345 CATTGTTAGTGGTCTAGTGATGC 59 20979382 20979403 CTTAACTTCGATCCGATTTCCG 59 NA Nonspecific Drosophila melanogaster 61 CG11566 FBgn0031159 FBtr0100609 3 1 1 98 X 20981364 20981498 TCTATGTGGTGGGAGACCA 59 20981560 20981578 GATTCGAGTTCAGTCTGCG 58 NA Nonspecific Drosophila melanogaster 61 CG11566 FBgn0031159 FBtr0100609 1 1 1 98 X 20981364 20981498 TCTATGTGGTGGGAGACCA 59 20981560 20981578 GATTCGAGTTCAGTCTGCG 58 NA Nonspecific Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 1 2 2 106 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412948 TAGTGCCATCCATGACCTC 58 NA Drosophila melanogaster 61 Tak1 FBgn0026323 FBtr0077319 1 1 1 93 X 20394148 20394166 CTGCACAACTTCCTTCACG 59 20393835 20394091 AATATGCCAGACCCTCTGC 59 NA Drosophila melanogaster 61 CG15459 FBgn0031108 FBtr0077329 1 1 1 189 X 20284592 20284610 GGAGCTATAGGCAGAACAC 57 20284252 20284270 TACACGATGAACAACAGGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089398,FBtr0089405,FBtr0089406,FBtr0089399,FBtr0089407,FBtr0089403,FBtr0089409,FBtr0089402,FBtr0089408,FBtr0089401,FBtr0089397,FBtr0089404 1 13 13 82 X 20106632 20106650 ATCAAGGACATGGAGGAGG 58 20106494 20106586 ATTTCGTCGAGATCCTTGC 58 NA Nonspecific Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074817 3 1 3 117 X 19635189 19638304 AACAACAAAGCGACAAATCG 58 19635091 19635109 TACGACTGGTAGCAGTAGC 58 NA InUTR Drosophila melanogaster 61 CG14234 FBgn0031065 FBtr0074790 1 1 1 90 X 19631540 19631558 TCTCACCTCCAGCATTGTG 59 19631610 19631743 GCCGATTATCCAATTGATGGT 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0074681,FBtr0301834,FBtr0301835,FBtr0074680 3 4 4 80 X 19236628 19236774 CTGATGTACAACAGTGCCG 58 19236566 19236585 CAGACAGCTCCCATTATTGC 59 NA Drosophila melanogaster 61 CG7288 FBgn0030969 FBtr0074643 3 1 1 90 X 18753661 18753736 AACTTTCCCATCAAGCACG 58 18753786 18753808 CCACCAGATTGTATTTCGTATCC 59 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074521 1 1 7 177 X 18007406 18007489 GAAACTCAGGTTGCTGCTG 59 18006028 18006050 CAGTATCTTACTGTGGTAGTCCT 58 NA Drosophila melanogaster 61 CG8289 FBgn0030854 FBtr0074484 2 1 1 149 X 17529491 17529509 TCAAGTCCGATCAAGAAGC 57 17528996 17529378 TTTAGCTGCAACCTTCTGG 58 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443,FBtr0074441,FBtr0074442 3 3 3 86 X 17182015 17182033 CAACCATCCAGGATTGGAC 58 17181555 17181966 CAATTGCGGTAGGTCTTCTC 58 NA Drosophila melanogaster 61 CG12996 FBgn0030835 FBtr0299541 3 1 1 87 X 17144690 17144708 CACCAGAATCAACTGCAGC 59 17144758 17145085 AAATTCGAACTCTGATGGCC 58 NA Nonspecific Drosophila melanogaster 61 CG5172 FBgn0030830 FBtr0114539 2 1 2 61 X 17116191 17116209 CAGAAGAACGGAGGAGGTG 59 17116559 17116578 TATGCCATGGAACACAAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5162 FBgn0030828 FBtr0074393 2 1 1 80 X 17110014 17110396 GATGTCAACTTTGTGGCGG 59 17110438 17110458 AATCTCCTCCGTATTGAAAGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG33252 FBgn0053252 FBtr0074346 1 1 1 80 X 16791014 16791035 CTGGAAATTCTCGAACACTTCC 59 16790876 16790975 AAATTTGAGAACGCTCGAAGG 59 NA Drosophila melanogaster 61 Twdlalpha FBgn0052574 FBtr0074329 1 1 1 131 X 16637874 16637975 AATTCAGGCCGAATACGAC 58 16638070 16638088 TAGTTAGAGCTGCCAGAGC 58 NA Drosophila melanogaster 61 CG32568 FBgn0052568 FBtr0301043 3 1 1 105 X 16635883 16635947 GCAATAAGATAGCCGAGCA 57 16636015 16636034 ACGTGTGGATATACAATGGG 57 NA Drosophila melanogaster 61 Pp2B-14D FBgn0011826 FBtr0074294 2 1 1 61 X 16452997 16453020 GAGAAGACGATGATCGATATTGAG 59 16452959 16452977 AACTGGCCGTGGATATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dsp1 FBgn0011764 FBtr0089259,FBtr0289960,FBtr0089263,FBtr0089261,FBtr0089262,FBtr0089260 2 6 6 81 X 16230976 16230996 AAAGAAACATCCCGATGAGAC 58 16231038 16231133 CTTGTCCACCATTGTCTTCC 58 NA Drosophila melanogaster 61 CG9919 FBgn0030742 FBtr0074236 2 1 1 80 X 16223395 16223559 TCGTTTGTCAAGTCCTTTGAC 59 16223335 16223355 ATGGTAGGAGTCCATCAATGG 59 NA Drosophila melanogaster 61 CG3679 FBgn0027521 FBtr0074222 1 1 1 80 X 16198938 16198959 GGAAAGCCGAATCAACTATACC 59 16198999 16199201 TCTTTGTGCCTTGAAGTTCG 59 NA Drosophila melanogaster 61 CG42354 FBgn0259700 FBtr0299951,FBtr0299950 2 2 3 60 X 15991602 15991751 CTGTCGATGATCAATGTGCT 58 15991561 15991579 GCGACAGGTAAACTCTGGA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 dpr18 FBgn0030723 FBtr0074206 3 1 1 80 X 15959724 15960412 AAGTTCTATACACGACATCCGT 59 15960452 15960471 GTAATGAACGATTCTCGCCG 59 NA Drosophila melanogaster 61 CG8206 FBgn0030679 FBtr0074085 3 1 1 60 X 15633865 15633884 GACAATCTGGGACTGTTCAC 58 15633904 15633925 TACTGATTCCAGAGCTAATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15642 FBgn0030642 FBtr0074076 2 1 1 133 X 15361491 15361509 AATCGAAATGGCGTACTCG 58 15361291 15361394 AATGATGCAGGCGTATGAG 58 NA InUTR Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 1 4 4 81 X 15230530 15230550 CTGATCATCGACTACGATGTG 58 15230592 15230664 TGGAGAAGTAAACCACCCTG 59 NA Drosophila melanogaster 61 CG9101 FBgn0030622 FBtr0074024 3 1 1 61 X 15123369 15123480 ATATCCAACGAATGCCAACG 59 15123327 15123345 CACCTGCTGAATCAGTCGA 59 NA DesignRelaxed Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009,FBtr0073955 2 2 2 81 X 14880362 14880380 TGCAATGAGTCCTTCTGCA 59 14880425 14884363 TGAAGCCGCATACATACCT 58 NA Drosophila melanogaster 61 CG9519 FBgn0030589 FBtr0073984 1 1 1 60 X 14749579 14749600 AGGCGAATATCTACAATGAGAC 57 14749540 14749561 TTAATGGGATACAGATACGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14414 FBgn0030571 FBtr0073930,FBtr0073932 1 2 3 112 X 14474872 14475008 ATCACCGATTCGACATGCT 59 14475626 14475644 TTTCAGTAGCGCATTGGTG 58 NA InUTR Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443,FBtr0073803 3 2 2 82 X 13471637 13471655 CACATGCCTCTTCAAGGTG 58 13471695 13474109 GATTGTCATCTGTGAGGTATTTCTC 59 NA Drosophila melanogaster 61 CG15729 FBgn0030399 FBtr0073664 3 1 1 151 X 12459170 12459190 AAATCCCTTAGCCAACATGTC 58 12458716 12459058 CCCGAGGAAGACATATTGTC 57 NA Drosophila melanogaster 61 CG2574 FBgn0030386 FBtr0073644 1 1 1 96 X 12303388 12303406 TATACCACTGCAACGTGGA 58 12303465 12303553 GAAAGTAGAACCTTGGCCAC 58 NA Drosophila melanogaster 61 CG2750 FBgn0030376 FBtr0300918 2 1 1 81 X 12001617 12001636 TACAACCCAAACGATTTCGG 58 12001678 12001819 CCGTCTCATAGGTCATATCCC 59 NA Drosophila melanogaster 61 CG1950 FBgn0030370 FBtr0073638 2 1 1 60 X 11950077 11950097 ACACAATTCATTTGCTCGACC 59 11950037 11950057 TTCTATGAAATCCGTGCTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Karl FBgn0030334 FBtr0073556,FBtr0073557 1 2 2 80 X 11684958 11684976 CATCCACAGAGGAACTTCC 57 11685017 11685103 TCATCGTTATATGCTGATCCTC 57 NA Drosophila melanogaster 61 CG2533 FBgn0030319 FBtr0073537 1 1 1 160 X 11497919 11498120 CGATTACAATTGGATTCAACCG 58 11497780 11497798 AGAGAACCAGTACGGTCAC 58 NA InUTR Drosophila melanogaster 61 PGRP-SA FBgn0030310 FBtr0073509 1 1 1 84 X 11456304 11456383 TTAGTTACAACTTCCTGATCGG 58 11456428 11456446 TATCCATAGGTGTGGGCAC 58 NA Drosophila melanogaster 61 hop FBgn0004864 FBtr0073457 2 1 1 86 X 11258444 11258525 GGTATCCAGATTCGATATCGCT 59 11258379 11258397 CATCCTTGACGGGACTCTG 59 NA Drosophila melanogaster 61 CG11752 FBgn0030292 FBtr0073452 1 1 1 60 X 11244367 11244388 CTGAATACTACAGCTTCAATCG 57 11244409 11244427 TACTTGGCCATTTCCACCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15203 FBgn0030261 FBtr0073392 1 1 1 84 X 10960951 10961814 TACTTATCGAGGGTTGCGG 59 10961862 10961880 CATTCCGGAAAGGGTTCAC 58 NA Drosophila melanogaster 61 CG32669 FBgn0052669 FBtr0073412 1 1 1 60 X 10737691 10737709 TCTTCGGCATCATTGGAGG 59 10737649 10737667 TTGGTCACATACATGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1826 FBgn0030228 FBtr0071497 1 1 1 80 X 10663953 10663973 CTTATACTTCGAAGCACGACC 59 10664015 10664101 ACAACATGGAATACCCGGT 59 NA Drosophila melanogaster 61 CG15308 FBgn0040941 FBtr0300073 3 1 1 273 X 10112399 10113114 AACATGAAGTTCTTCATCGCC 59 10112146 10112164 ATCCACCATAGGACTGCAC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG15313 FBgn0030173 FBtr0071418 1 1 1 113 X 9943767 9943786 ATATGACTTGGCATTGCCAG 58 9943862 9943936 TCAATTGACGGCTTACGGA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33557 FBgn0053557 FBtr0091534 2 1 1 84 X 9903659 9903677 CGCAAGCTTTCAAAGATCG 58 9903724 9903800 ATTCAGTGCCTGTTTCTAGG 57 NA Drosophila melanogaster 61 CG16892 FBgn0030122 FBtr0071319 1 1 1 134 X 9168711 9168965 AGTCTGCTATCCTCTTCGG 58 9169063 9169081 ATAATTGCCATGCGGATCC 58 NA Drosophila melanogaster 61 amx FBgn0000077 FBtr0071331 2 1 1 60 X 9140283 9140301 TCGATGTCCTGCTCATCTC 59 9140241 9140262 TATATGTAAAGTGAGCCATCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ost48 FBgn0014868 FBtr0071344 3 1 1 154 X 9052444 9052462 GATGTGGAAGGCTCTCCTG 59 9052234 9052326 GCTTAAATCCGCGATCCTG 59 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 1 3 3 85 X 8466541 8466559 GAGGTTCGACCACTATGTG 57 8466323 8466492 TGTTCAGTTCATTGCAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1636 FBgn0030030 FBtr0071171 3 1 1 82 X 8167779 8168326 CTCTTCCAGTTCTTTCTGAAGTC 59 8168367 8168386 AAGGCGATGTTCCAAATGAC 59 NA Drosophila melanogaster 61 p115 FBgn0040087 FBtr0071089 3 1 1 60 X 7790019 7790037 CAAGCTGTACAAGGGACTG 58 7790058 7790079 ATCTACATCAAATCCGCTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1999 FBgn0029947 FBtr0071054 1 1 1 99 X 7252977 7253172 GTGTATATCTAGAATCATGCAGCG 59 7253230 7253248 TCGAAGGTCAATCCATCCG 59 NA InUTR Drosophila melanogaster 61 unc-119 FBgn0025549 FBtr0071066 2 1 1 113 X 7183621 7183640 GCCTGCTAAAGACGTTTGAC 59 7183286 7183546 TCATCTCAGCAACTAGGTCG 59 NA Drosophila melanogaster 61 CG4615 FBgn0029935 FBtr0071020 1 1 1 115 X 6993680 6993769 CTACCAGCAGGTCTTCCAC 59 6993583 6993601 TCATACCGTGGAAGTGGTG 59 NA Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0100214,FBtr0300838,FBtr0300843,FBtr0100208,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100217,FBtr0100207,FBtr0300839,FBtr0300840,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 2 21 21 60 X 6979471 6979492 GTGCTATTAAAGTGCTGAATGG 58 6979362 6979451 GCATAGGAAACCTTAAGCCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3446 FBgn0029868 FBtr0070924 1 1 1 131 X 6244079 6244164 TACTTCACAGGCTTCACCA 58 6243966 6243984 AAAGATGACATTCTGGGCG 58 NA Nonspecific Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870 2 1 2 154 X 6170459 6170477 GGAATCCCTGGTGGATGAG 59 6169193 6170268 CATGACGGCAGCTAATTGG 59 NA Drosophila melanogaster 61 CG14445 FBgn0029851 FBtr0112954,FBtr0070893 2 2 2 81 X 6132166 6132184 CAGATGACTATCAGGCGGT 59 6132229 6132992 CACGGTATGGCAATCTTGC 59 NA Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070875 3 1 2 87 X 6114595 6115423 ATACCCTTCCAATATGGCTCTG 59 6115471 6115489 CAGAAAGACCACGTTGCTG 59 NA InUTR Drosophila melanogaster 61 CG4660 FBgn0029839 FBtr0070886 2 1 1 169 X 5973505 5973651 TTTCGCGGATTATTTACTGGG 58 5973356 5973374 GAATCCGTTGGAGGAGGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4666 FBgn0029838 FBtr0070887 2 1 1 102 X 5971008 5971378 ACTGCAAATTGGGAATCCA 57 5970924 5970944 GGATGAAGTAGTTGACATCCC 58 NA InUTR Drosophila melanogaster 61 CG3011 FBgn0029823 FBtr0070827,FBtr0290235 3 2 2 98 X 5808426 5808621 GGCAAGAGGTACTACGGTG 59 5808346 5808364 CCACTTCTCATCGTCCAGG 59 NA Drosophila melanogaster 61 CG3239 FBgn0029769 FBtr0070792 1 1 2 193 X 5389801 5390042 GGCTTACTTGTAGTTCAGAAGAG 59 5389630 5389649 GTACTTGAAGACGAAAGGCG 59 NA InUTR Drosophila melanogaster 61 CG15786 FBgn0029749 FBtr0070746 3 1 1 89 X 5196019 5196037 ATGGACCTACTATACGGCC 58 5196090 5196169 CAATTGCGGAATGTCTCTG 57 NA Drosophila melanogaster 61 CG15786 FBgn0029749 FBtr0070746 2 1 1 89 X 5196018 5196037 AATGGACCTACTATACGGCC 58 5196089 5196168 AATTGCGGAATGTCTCTGC 58 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949,FBtr0070728,FBtr0112950,FBtr0070729,FBtr0112948 1 5 5 74 X 4823412 4823430 GGTAGTAAGCGTCACTGGG 59 4823291 4823309 CTTCTGTTTGGCCATGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12682 FBgn0029729 FBtr0070716 1 1 1 60 X 4720520 4720541 CCCATTTATGCAAATTTAGCCC 58 4720562 4720580 GATTCCGCCTATAGACGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Bteb2 FBgn0025679 FBtr0070735 1 1 1 60 X 4665497 4665517 CTTTACAGCGACTTGGAAGAG 59 4665457 4665476 TGACTATATTTAGCAGCGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2901 FBgn0029679 FBtr0070605 1 1 1 80 X 3724416 3724437 CACCATCCTTTATCACAATCTG 57 3724477 3724720 ATGAAGCGTCTAGTGATCTC 57 NA Drosophila melanogaster 61 Parg FBgn0023216 FBtr0070585 2 1 1 135 X 3564608 3564696 CTTTAACAGGCTTTACCAATCG 58 3564494 3564513 ACGAACAAAGGTTACCACAC 58 NA Drosophila melanogaster 61 CG16782 FBgn0029659 FBtr0070531 2 1 1 147 X 3354062 3354081 CGCGTATCAAGCTAGATTGC 59 3353864 3353883 GAGAACAACATTGAGCACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG18508 FBgn0028746 FBtr0070543 1 1 1 105 X 3067009 3067087 CATTAAATAGCCCGAACAATGG 58 3066925 3066943 GATTCCAGTAGCGCAACAG 59 NA InUTR Drosophila melanogaster 61 mit(1)15 FBgn0004643 FBtr0070441 1 1 2 123 X 2499676 2499755 AAGTGCTCAGGACTTTGTC 57 2499842 2499860 ATTGATGTAGGTGTGCAGC 58 NA Drosophila melanogaster 61 CG3091 FBgn0029608 FBtr0070416,FBtr0100226 1 2 2 143 X 2146890 2146963 GAAGTCCGCAACATGATCC 59 2146765 2146783 CCTGATGGACTGAATGCCT 59 NA Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0301515 2 1 2 83 X 2030549 2030569 GTGCTTAGTCGTTACACTGAG 58 2025747 2030504 TTCTGTGTCCGCTAGTCAC 59 NA InUTR Drosophila melanogaster 61 CG32810 FBgn0025394 FBtr0070260 2 1 1 116 X 1408812 1408897 AGGAACTAACCCAGATGATCTC 59 1408974 1408992 ATACCACGCACAGGAACTC 59 NA Drosophila melanogaster 61 DAAM FBgn0025641 FBtr0070241,FBtr0070240,FBtr0070239 1 3 3 80 X 1187402 1187420 CATGCTCGGTATACAGCCT 59 1187280 1187360 TCAAAGAAGTCCAAATGCCTG 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 3 3 3 116 X 938608 938687 GCAATCTGGATAAGGCTCCT 59 938765 938784 CAGCAGCATTCGAACTAGTC 59 NA Drosophila melanogaster 61 CG14635 FBgn0029535 FBtr0070142 1 1 1 60 X 739166 739184 TGGCAGATCTTTCCAAGAC 57 739206 739226 GAACTGGTCGGGAATATTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4g1 FBgn0010019 FBtr0070099 3 1 1 60 X 362979 362998 CAACAAGTACGGAGAAACCA 58 362938 362958 GGTTAGAAACACCAACAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42376 FBgn0259722 FBtr0299979 2 1 3 186 X 149333 149351 TATGATCCCTTGGAGGACC 57 149853 149929 CAACATGTGTCGCTAATAGTC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG17636 FBgn0025837 FBtr0112921 3 1 1 111 X 21963 21983 CGCCAAAGCTATTTATGGAGG 59 21787 21893 CCATCGAACATTGTAACTTTGC 58 NA Drosophila melanogaster 61 CR41550 FBgn0085803 FBtr0114257 2 1 1 60 U 9115960 9115980 GCAGGACACATAAACATCGAC 59 9115920 9115940 AAAGTACCTAACAGCATGGAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42430 FBgn0259861 FBtr0300158 1 1 1 60 U 8078106 8078124 TTTCGGTTGTACCAGAAGG 57 8078064 8078084 TATTCTTTGGTGAGGACTTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40968 FBgn0085546 FBtr0302238 3 1 1 60 U 6307265 6307284 TAACGCGGAGATTAAGAGGA 58 6307306 6307325 CAGGGTCCTAGCATTATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 toy FBgn0019650 FBtr0089185 2 1 1 82 4 1026626 1026703 TCAAACACAGGTGTCATTTCTG 59 1026746 1026764 TTGCTTCCCGTTAGGTCAG 59 NA Drosophila melanogaster 61 CG31999 FBgn0051999 FBtr0089144 3 1 1 80 4 238918 238937 GAATACGTGTCGTGATGTCG 59 238104 238876 TTGGTGCAAATGTCATTCCG 59 NA Drosophila melanogaster 61 snoRNA:Me18S-G1358a FBgn0086053 FBtr0114329 1 1 1 60 3R 5179999 5180020 ATGATATTTCCATGCACCACTC 59 5180038 5180059 CAGAAATCCATAATCTGCACGA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U4atac:83A FBgn0052861 FBtr0078791 2 1 1 88 3R 1216917 1216935 CCCAACTTTACCGTAACCA 57 1216986 1217005 ACCACGATTCAATCTTGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085851 3 2 3 98 3R 27636788 27636806 TCAGACGAATCCCTACAGC 58 27636649 27636729 TGCTTAACATAGCCCTTAATGG 58 NA Drosophila melanogaster 61 ferrochelatase FBgn0024891 FBtr0085849,FBtr0085850 2 2 3 82 3R 27637149 27637168 AATATCCACAGTACAGCTGC 57 27637031 27637104 CGAGGGCAGATTATTGCTC 58 NA Drosophila melanogaster 61 CG1971 FBgn0039881 FBtr0085847,FBtr0085848 3 2 2 60 3R 27631759 27631778 GCATGAGTTTGCCTTCTGAC 59 27631801 27631819 AGGTGCTCAAATTCCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Smvt FBgn0039873 FBtr0085860 2 1 1 90 3R 27586673 27586694 GACCTTCATCTTCATATTGACG 57 27586545 27586623 ATTAAATCCGGTCACCTGTG 58 NA Drosophila melanogaster 61 CG1896 FBgn0039870 FBtr0085837 1 1 1 106 3R 27570653 27570733 GAAATTCGCTCCACATGGG 59 27570802 27570821 CCTATCCACTGAGCTGTAGG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085828,FBtr0085826,FBtr0085827,FBtr0085825,FBtr0085830,FBtr0085829 3 6 6 85 3R 27553965 27554123 GATGATCTAAATGAAAGTCGCG 58 27554169 27554187 TCTTCATGATGGCTCACCA 58 NA Drosophila melanogaster 61 CG11550 FBgn0039864 FBtr0085867 2 1 1 80 3R 27504361 27504435 TTACTACCTGCAGGAAGCG 59 27504299 27504319 AGAATCTTGTCCATGAACGGT 59 NA Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 1 2 2 145 3R 27286755 27286776 GAGGGAAAGTTGAACTATTTGG 57 27286573 27286649 GCGTCCAGAAATCTATGCT 57 NA Drosophila melanogaster 61 CG15547 FBgn0039809 FBtr0085715 2 1 1 91 3R 26708637 26708712 TCCCAACTATATTCACGAGCC 59 26708566 26708584 CGTAGATCTCCTCGAGCAG 59 NA Drosophila melanogaster 61 PH4alphaNE3 FBgn0051017 FBtr0085667 2 1 1 80 3R 26430059 26430137 CCAACTAAAGAGACTAGCCCA 59 26430179 26430197 GGATTGCCCAAGTACTCCT 59 NA Drosophila melanogaster 61 CG15537 FBgn0039770 FBtr0113310 2 1 1 101 3R 26261873 26261949 CCTAATGGCGTTTGTCGAC 59 26261790 26261808 TTGCAGAACTCGTAAACGC 59 NA Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 3 2 2 84 3R 26004019 26004037 AAGATGTTCCGAAACGTGC 59 26004085 26004169 GGATCTGGTACTCTCCAGG 58 NA Drosophila melanogaster 61 CG15529 FBgn0039748 FBtr0085567 3 1 1 181 3R 25978101 25978368 GATTACGTCATTGTGGACGA 58 25978512 25978530 ATGTAACGGATCCACTGGT 58 NA Drosophila melanogaster 61 CG7920 FBgn0039737 FBtr0085603 2 1 1 114 3R 25837477 25837495 TGTCCTTCATCCACGTGTC 59 25837320 25837401 TTGATTTGAGCCACAATGAGC 59 NA Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085549 1 2 3 194 3R 25823903 25823921 CAGAGACTATCCCGATCCG 58 25824147 25824165 CCTTCTTCCGGTACTCGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0300825,FBtr0085505 3 2 2 130 3R 25763172 25763248 CCCAGGAATTTCAGCAAGAG 59 25763339 25763359 CATGTATTCATCCGTGTTCCT 58 NA Drosophila melanogaster 61 DopR2 FBgn0015129 FBtr0085467 3 1 2 225 3R 25458579 25465965 CGTTCCAAATCGCAGTGTC 59 25458372 25458390 ATCTAGTGCAGGATCGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31445 FBgn0051445 FBtr0085401 2 1 1 83 3R 25067895 25067966 CAAACCGGATTTCCTGTGC 59 25067830 25067848 ATTGCGCAAGTAACGTTCC 59 NA Drosophila melanogaster 61 CG11837 FBgn0039627 FBtr0085360 1 1 1 80 3R 24876084 24876102 CCTTTAAGGTGACGTCCGT 59 24876145 24876228 CTTCAATCGGCTCATTCCTG 59 NA Drosophila melanogaster 61 eIF4E-6 FBgn0039622 FBtr0302515,FBtr0085344,FBtr0302516 3 3 3 88 3R 24852820 24852840 TCAAATGCTCTAAGCTTGACC 58 24852693 24852711 ATGACTCTTTGGTTTGCCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Apc FBgn0015589 FBtr0085351 1 1 1 151 3R 24662200 24662278 ACTGAGTCAGGCTATTGCC 59 24662067 24662085 CTGTCATCGCCGAATTCAG 59 NA Drosophila melanogaster 61 CG10011 FBgn0039590 FBtr0085319 2 1 1 131 3R 24435784 24435802 GATGGTCAACTCGAAGCAC 58 24435611 24435689 GTCATGTTGGATGCAAGCT 58 NA Drosophila melanogaster 61 CG5590 FBgn0039537 FBtr0085215 3 1 1 60 3R 23504584 23504602 CGATTTCCAGAAGGCTCTC 58 23504626 23504644 CTACAGCTTGGACTTGAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3348 FBgn0040609 FBtr0085172 3 1 1 172 3R 23117851 23117872 ACTAACGACCAAGAAATAGCAC 58 23117568 23117586 GTAATTCCGGAACATGCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5984 FBgn0039500 FBtr0085181 1 1 1 240 3R 23072867 23072950 TTCTTCAGTGCCCATCTCG 59 23072645 23072663 GATGTAGTCACCGGGATCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG6271 FBgn0039476 FBtr0085149 1 1 1 188 3R 22851699 22851787 AATCTTTGCTCTAGCCGCT 59 22851529 22851547 TAGAAGTTCACGGGAACGG 59 NA DesignNoJunction Drosophila melanogaster 61 Sld5 FBgn0039403 FBtr0299797,FBtr0084975 2 2 2 60 3R 21882130 21882149 TGGAGGATGAGGATGATGAC 58 21882029 21882110 ATGATTTCCAGAACCTTCTGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5886 FBgn0039379 FBtr0084907 3 1 1 182 3R 21677872 21677893 CATAAAGTCCGTAAAGAACGAG 57 21678035 21678161 AGCAGCTTTAACTTCTTGGT 57 NA Drosophila melanogaster 61 CG17196 FBgn0039368 FBtr0302177 3 1 2 84 3R 21601874 21601898 TATGCCAATCTCTATCCTAAGAAGG 59 21601739 21601835 TCGCTGATATCACAAAGAACAG 58 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 1 5 5 102 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507759 21507836 AGATGGCGTAATGGTCACC 59 NA Drosophila melanogaster 61 CHKov2 FBgn0039328 FBtr0084849 1 1 1 80 3R 21156188 21156206 GTATGCCCTTCCTGGAGTG 59 21156076 21156150 GTTGAGATGTATAGTCGCTTATGAG 59 NA Drosophila melanogaster 61 CG31288 FBgn0051288 FBtr0084860 2 1 1 93 3R 21124915 21125030 CTGGAAATGAAAGATGGTAGTGTC 59 21124845 21124863 CAAACTCGTTGATGTCGCT 58 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 1 3 3 80 3R 20869766 20869842 TCTTTCCGGAGTGTAAATGGT 59 20869706 20869725 TGACTAGATCGATGACGGTG 59 NA Drosophila melanogaster 61 CG11781 FBgn0039259 FBtr0084797 1 1 1 82 3R 20850550 20850568 GGAATACTGTCGCACATCG 58 20850430 20850448 AAAGGAATCCCAGCGTACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10845 FBgn0039246 FBtr0084713 2 1 1 60 3R 20726962 20726980 GATAAAGTGCCCTCATCCC 57 20727004 20727022 AGATGTCAAGAGTTTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13641 FBgn0039239 FBtr0084729 1 1 1 60 3R 20690123 20690142 ATGACTACTATCCACCACCT 57 20690082 20690101 GACGGCTGAGAGTAGTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 2 2 2 80 3R 20058626 20058644 CCGACACCGAATTCTATCC 57 20058686 20061548 GAATATCGTCCTCTGAAACGG 58 NA Drosophila melanogaster 61 AP-1sigma FBgn0039132 FBtr0084496 3 1 1 193 3R 19785064 19785085 AGATCATTCATCGCTATGTGGA 59 19785306 19787781 GGTCTCATCCTCTTGGAGC 59 NA Drosophila melanogaster 61 Ir94h FBgn0039080 FBtr0273205 2 1 1 60 3R 19314042 19314064 AGTTACCCTATGTACGACATCAG 59 19314083 19314102 CACTTAAAGGCTTCTCCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS3 FBgn0002622 FBtr0084410 3 1 1 61 3R 19184598 19184879 TCCAAGAAACGCAAGTTCG 59 19184901 19184922 GTCAGGAACTCGTTCAATTCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4704 FBgn0039029 FBtr0084314 3 1 1 81 3R 18670516 18670534 GAAGTTTCTACACGCCCTG 58 18670397 18670471 AGAGATCACCGAACTGGAC 58 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084335,FBtr0302856,FBtr0084334 2 3 3 142 3R 18514114 18514184 AATGCTGCAGCTAATCACG 59 18513990 18514008 AGGGCAGAGTATTCGTCTC 58 NA Drosophila melanogaster 61 CG34149 FBgn0083985 FBtr0111020,FBtr0113489 3 2 2 175 3R 18205911 18205985 CCGATTCTGAATGGAAGACAG 58 18206122 18206140 TGGCTTGTTAGGATCCTCG 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 2 4 4 86 3R 17404341 17404359 AATGAGAGCTGCATCTCCT 58 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 CG5798 FBgn0038862 FBtr0084016 1 1 1 80 3R 16962658 16962740 AGATTTGAGGTACGTTGTGG 58 16962783 16962801 ATGGTGAGGAATTCGTGTG 57 NA Drosophila melanogaster 61 CG15923 FBgn0038814 FBtr0113254 3 1 1 80 3R 16438765 16439049 TCGACCATGCTATCAAGGA 58 16438703 16438722 TGTCTATTTCGCAGTTCAGC 58 NA Drosophila melanogaster 61 CG17752 FBgn0038718 FBtr0083779 3 1 1 80 3R 15437839 15437858 TGTTGATCAGCTTCCTCCTC 59 15437900 15437977 TTTGTGGTAGTTGCTTGTGC 59 NA Drosophila melanogaster 61 CG11703 FBgn0038690 FBtr0083744 3 1 1 60 3R 15053220 15053239 CAAGATTTGGATCACCTGCG 59 15053179 15053198 CGGATAGAAGACCATTTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 2 4 4 98 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981432 14981451 CAGTCAAGCACCTTGTTCAC 59 NA Drosophila melanogaster 61 dnk FBgn0022338 FBtr0083707 1 1 1 112 3R 14807872 14807890 CTCGTTCTGAGGAGAGCTG 59 14807966 14808041 GAGGACTAGGACCTTGCAC 59 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100273,FBtr0083604,FBtr0301556 3 3 6 159 3R 14080907 14081050 AGTTTCCCAAAGTTGAGCC 58 14080766 14080784 ACACTGCTATTCTGGTCCC 59 NA Drosophila melanogaster 61 CG7168 FBgn0038586 FBtr0083608 1 1 1 105 3R 14051544 14051631 GGGATACGCTGAAGTACAG 57 14051379 14051397 AGTTAAGCGCAGAGATGAC 57 NA InUTR Drosophila melanogaster 61 l(3)07882 FBgn0010926 FBtr0083504 2 1 1 239 3R 13363288 13363306 AAATGAAACCCTTGGCTCC 58 13363006 13363085 GCTCCTTGTCACTTTGCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG34280 FBgn0085309 FBtr0112476 2 1 1 151 3R 13229268 13229289 CTGTACCTATAGGAATCCTTGC 57 13229067 13229086 TATTCAGCTGCTTCTTCTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17477 FBgn0038479 FBtr0083418 3 1 1 60 3R 12952322 12952341 CTATGACAGTCCCAAGTACC 57 12952281 12952299 GGTAATGCTCTCGTTCAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34278 FBgn0085307 FBtr0112473 2 1 1 60 3R 12946296 12946316 TGATTCAACTACGGAACAGGA 59 12946338 12946356 CAAGGGAGCTAGGGTAGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17931 FBgn0038421 FBtr0083323 2 1 1 68 3R 12184440 12184458 TTTGACCAAGGGAAAGCGA 59 12184319 12184408 ATTAACTCAGCGTCCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6901 FBgn0038414 FBtr0083269 2 1 1 82 3R 12149494 12149514 TACTGTTGGTTTGTAGGTGTC 58 12149557 12149649 ACATAGTAGACCAGCTTGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31183 FBgn0051183 FBtr0083187 3 1 1 81 3R 11692276 11694902 GTCGAGAATTGTCATAATGTGC 58 11692216 11692237 ATCGATCATATTCAACTCCTCG 58 NA Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 3 2 2 80 3R 11271112 11271131 CACAGTTCTGTGACAAGTCC 58 11270984 11271069 TCACAGTGAGATTGAGGCG 59 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060 2 1 6 111 3R 11070023 11070100 ATATGTCTAAAGCTCCTGCTG 57 11070173 11070191 GTACGATTACCCTGGTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12241 FBgn0038304 FBtr0083051 1 1 1 108 3R 11045774 11045859 CCACGATATAGTTAAAGCTTCTAGC 59 11045924 11045943 ATTCGGATTGCTAAAGCAGG 58 NA Drosophila melanogaster 61 CG3509 FBgn0038252 FBtr0082969 2 1 1 73 3R 10489975 10489993 ATCCAGTAAACCAACCGAG 57 10490123 10490142 TATCCTTGGTTCCATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 1 2 2 80 3R 9125274 9125295 CAGATGAAGGATAAGCTTGTGG 59 9125335 9125488 CGTCGTAGAAATGGTTCTGG 58 NA Drosophila melanogaster 61 CG14384 FBgn0038097 FBtr0082731 2 1 1 191 3R 8792187 8792283 CTTAAACATTACCAGGTCCGC 59 8792016 8792034 ACTTCTTGGCGAATCTGGT 59 NA Drosophila melanogaster 61 Cyp313a4 FBgn0038076 FBtr0082667 1 1 1 80 3R 8506923 8506941 GCTAAAGATACCGGGACCA 58 8506796 8506880 GCGTTGAGGATATCTTCCCT 59 NA Drosophila melanogaster 61 Scgbeta FBgn0038042 FBtr0082596 2 1 1 60 3R 8247234 8247253 CATTCTCATCAACTCCACGC 59 8247193 8247211 CAGAAAGATACCCGTGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Scgbeta FBgn0038042 FBtr0082596 1 1 1 60 3R 8247235 8247254 ACATTCTCATCAACTCCACG 58 8247194 8247212 AGAAAGATACCCGTGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dip-C FBgn0000455 FBtr0082597 1 1 1 60 3R 8238219 8238237 ACATAACCTGCACATTCCC 57 8238177 8238198 TTGTAGATGAACTTCTGGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112655,FBtr0112654 2 2 3 109 3R 8212109 8212235 TTCTGGCTAGATTGCTCCT 58 8212308 8212326 ATCAGGCAGTTGTTCTTGG 58 NA Drosophila melanogaster 61 CG17726 FBgn0037880 FBtr0082352 2 1 1 92 3R 7052767 7052788 CTACTATATGAACCGGGATGTG 58 7052841 7052916 CAAATTCCCACGAGCTCTC 58 NA Drosophila melanogaster 61 Ugt86De FBgn0040255 FBtr0082376 3 1 1 61 3R 6993443 6993464 TCCAGTTCCGGAATTATTTGAC 58 6993337 6993358 CCTTCCGGTTTGTTAGATTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 fau FBgn0020439 FBtr0082309 2 1 4 90 3R 6598880 6602914 TTCCTACGCAGTTACGTACC 59 6598809 6598829 GATGATGACAAGCGATGTAGG 59 NA Drosophila melanogaster 61 CG31467 FBgn0051467 FBtr0082320 1 1 1 60 3R 6531998 6532017 AGACCAACGATATGAAACGA 57 6531957 6531976 GCAACAAGCATACGATACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Skeletor FBgn0020517 FBtr0091656 2 1 1 61 3R 6519561 6519709 GAAACCAAGATGGCATCCG 59 6519734 6519752 ATTCGGGTTCCTCAGTAGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Irp-1B FBgn0024957 FBtr0082259 3 1 1 81 3R 6236384 6236402 ATCTGAAGGCAACTCAGCA 59 6236262 6236342 AGATCCAAGGTGATACTCTGAG 58 NA Drosophila melanogaster 61 cwo FBgn0259938 FBtr0082246 2 1 1 105 3R 6215148 6222425 CAAGTATGAGAGCGAAGCA 57 6222494 6222512 ATATTCAGCATCGTCCTCG 57 NA Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 1 2 2 122 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175608 6175626 CGGCTTGATGTTCGATGTG 59 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215 1 1 2 80 3R 5826084 5826312 GGATTATACTTTAATGGGTAGGCAC 59 5826028 5826046 ATCCAATGAAGCACGACGA 59 NA InUTR Drosophila melanogaster 61 nmdyn-D7 FBgn0028997 FBtr0082083 3 1 1 82 3R 5506381 5506452 TCCTCTTCAGTCCTTATGAACG 59 5506494 5506513 ATGGTCTCCACTACGTTGTC 59 NA Drosophila melanogaster 61 CG9363 FBgn0037697 FBtr0082043,FBtr0082041,FBtr0082042 3 3 3 97 3R 5284386 5284405 GATCAGCCTGATCAAATCCG 58 5284247 5284328 TGTGTCCATCAATCTGTAGGG 59 NA Drosophila melanogaster 61 osk FBgn0003015 FBtr0081956,FBtr0081954 3 2 2 81 3R 4761331 4761351 ATATAGATAGTGAGGTGCGCG 59 4761391 4761660 CGATATTCACTCTTGATGCTCG 59 NA Drosophila melanogaster 61 CG7443 FBgn0037577 FBtr0081837 1 1 1 125 3R 4150143 4150213 CTCTGTCAAGACGAAACGC 59 4150355 4150373 ACTACCGTGCAGTTACGAC 59 NA Drosophila melanogaster 61 CG11698 FBgn0037572 FBtr0081833 3 1 1 60 3R 4137967 4137986 TGTACGATGCAAGATTCCCA 59 4138008 4138027 TTCGAAAGAAGCAACATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL1 FBgn0037566 FBtr0081832 3 1 1 80 3R 4127780 4127858 AAGGGAAATAATGAAGTCCTGG 58 4127894 4127917 GGTAATATCCTTAATGAGCTCCAC 59 NA Drosophila melanogaster 61 CG33722 FBgn0064126 FBtr0091719 1 1 2 95 3R 4069898 4069920 TACAGATACGTATCCTTGTAGGG 58 4069975 4069993 GTCACGTTCACATTCTGCC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG10029 FBgn0037498 FBtr0081591 1 1 1 80 3R 3142378 3142398 TCATTTCCAAGGATCATGCTG 58 3142214 3142337 CCACAAGGAACCTACAATCG 58 NA Drosophila melanogaster 61 CG1227 FBgn0037491 FBtr0081598 1 1 1 80 3R 3074116 3074192 CAATTTACACAGAGGACATGCA 59 3074057 3074075 CACTAAACACGAATGGCCG 59 NA Drosophila melanogaster 61 CG14608 FBgn0037487 FBtr0113201 3 1 1 80 3R 3063247 3063266 ATTCCGAAGACCTCGTTCAG 59 3063307 3063388 ATGAAAGACCTGACAATCGGT 59 NA Drosophila melanogaster 61 pb FBgn0051481 FBtr0089279,FBtr0089278,FBtr0089276,FBtr0089277 1 4 4 80 3R 2536679 2537242 TGATCAGTCCGATAGTAACTCC 59 2536620 2536640 GTGGAATCGGGTATATCATCG 58 NA Drosophila melanogaster 61 Ccp84Af FBgn0004778 FBtr0081695 3 1 1 240 3R 2515829 2515905 GCCTTCAAGTTCTTCGCTG 59 2515607 2515626 CCTCAACCTGACTCTTCGAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15184 FBgn0037459 FBtr0081680 2 1 1 165 3R 2445011 2445029 TAAAGCTGCGAACAATGGC 59 2445719 2445865 CAGGATGTTGGGAGTCCTG 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 3 2 2 99 3R 2198947 2199033 GTGGAATTTGACCAAGAACTCC 59 2198869 2198887 AATGGTCTTCTGGACGGTG 59 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 3 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 CG10979 FBgn0037379 FBtr0078631 3 1 1 81 3R 1621009 1621113 GGATACACAGATCAGAATTCCAC 59 1621151 1621172 TGCGTAGCATATGTTCAATGTC 59 NA Drosophila melanogaster 61 CG14661 FBgn0037288 FBtr0078848 3 1 1 83 3R 779987 780066 GCAATATGCCTGACTATATCCAG 59 779926 779944 GCAAGTTGTGAACACTGCT 59 NA Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0100159 1 1 2 111 3R 733740 733758 GAAGACTCTGGATGTGGTC 57 733832 733913 CAAATTGTGATTGGTCACGT 57 NA Drosophila melanogaster 61 CG9853 FBgn0086605 FBtr0078949,FBtr0113192 3 2 2 89 3R 225227 225245 AACTTCCTGTGGGTTCCAC 59 225096 225176 AATGGTCCGTTGAATAAGGGT 59 NA Drosophila melanogaster 61 CG9776 FBgn0027866 FBtr0078956,FBtr0078955 1 2 2 105 3R 155846 155864 AGAAAGACGAGGACAAGGC 59 155694 155715 GCATCTATTGTACTACGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 Or82a FBgn0041621 FBtr0078977 3 1 1 80 3R 83836 83913 AGGCTGAGAGTCTACAAGTC 58 83954 83974 ACAAAGATGTACGTGTCTTGG 58 NA Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0078988 1 1 2 80 3R 31504 40885 GCTTCTGGTTAAAGAAATCGTC 58 31445 31466 GAACAATAAAGGATTGCCATCC 58 NA InUTR Drosophila melanogaster 61 snoRNA:Psi28S-3327b FBgn0082966 FBtr0113612 2 1 1 80 3L 13036083 13036104 GTCTATTGGTTCAAATCGAAGC 58 13036144 13036163 GTTACTCAGACGACTGTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3327a FBgn0082967 FBtr0113611 1 1 1 77 3L 13035888 13035906 TTGCGTGTAGAATAGTGCG 58 13035947 13035965 TGTCGAATCAGAGACCGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-2622 FBgn0086670 FBtr0091635 1 1 1 60 3L 1488944 1488964 CTAGAATTGTTGCACTTTCCG 58 1488985 1489004 CAGCAGCCTATGATTATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr011:3L FBgn0083068 FBtr0091958 2 1 1 102 3L 11090148 11091196 GGACGTTTACGACGTTCTC 58 11091261 11091280 TTTCTTCTGCATTTCCGTCC 58 NA Drosophila melanogaster 61 CG41454 FBgn0084017 FBtr0111173 1 1 1 160 3L 23131360 23132879 CAACATTCGTTGACTTTCCTC 57 23133001 23133019 AACGAAACGGGAGAAACAG 58 NA Drosophila melanogaster 61 Trxr-2 FBgn0037170 FBtr0078514 3 1 1 60 3L 22543857 22543877 TGGAGTACGTAAATTCGATGG 58 22543899 22543917 ATCGCCACATACTCGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11437 FBgn0037165 FBtr0078505 3 1 1 60 3L 22462719 22462737 CTTAACAGATGTGGCAGCT 57 22462761 22462779 TACTGTTGCAAAGAAGGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11523 FBgn0037156 FBtr0078511 2 1 1 60 3L 22259527 22259545 GCATCTCATCCAAACTGGC 59 22259485 22259504 TCGATAGTCCGGATGTTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7140 FBgn0037147 FBtr0114546 3 1 1 60 3L 22019744 22019764 GAATAGCAAGCAGCTAATCGG 59 22019704 22019723 GGACCGAGGATCTCTTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14572 FBgn0037128 FBtr0078434 2 1 1 60 3L 21734822 21734840 ATAGACCACAAGGTCGCTC 59 21734861 21734882 CCTTCAATGACCTCTACTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32440 FBgn0052440 FBtr0078345 2 1 1 99 3L 21353623 21354059 GACACCAACGTCTATCAGC 58 21354121 21354140 GCTATTTCGAGGAACTGTCC 58 NA Drosophila melanogaster 61 ko FBgn0020294 FBtr0078324 2 1 1 84 3L 21072049 21072162 CATCTTCACACCAGAACGC 59 21071983 21072003 GTGACCATAGGCTAGACTACC 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 2 2 4 71 3L 20764899 20764917 AATGGTCAATTCGTCTGGC 58 20764952 20765710 TTTGGCCTGTGATAGTGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32225 FBgn0052225 FBtr0074845 3 1 1 100 3L 20297873 20297891 GATCCTATCGCGACGAGAC 59 20297734 20297810 TTTGAAGTATCTCCAACCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6996 FBgn0036950 FBtr0302721 2 1 1 117 3L 20200721 20200978 CGAGATGGACACAAAGCTC 58 20201059 20201077 CATCTTGGTTCCGTTGACC 58 NA InUTR Drosophila melanogaster 61 CG6996 FBgn0036950 FBtr0302721 1 1 1 116 3L 20200721 20200978 CGAGATGGACACAAAGCTC 58 20201058 20201076 ATCTTGGTTCCGTTGACCA 59 NA InUTR Drosophila melanogaster 61 CG7365 FBgn0036939 FBtr0074867 2 1 1 92 3L 20117838 20117975 TCAACACCGAGACATTTACG 58 20117765 20117783 AGAATCGGGTATCCGTCTG 58 NA Drosophila melanogaster 61 CG7646 FBgn0036926 FBtr0074901,FBtr0074900 2 2 2 67 3L 19988554 19988575 CGATGGCAATGGTGTTATAGAC 59 19988600 19988747 CTAGCATGTCATAAATTGCCTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG33710 FBgn0053710 FBtr0091698 3 1 1 93 3L 19945717 19945792 CAATACGGCTGACCATAGC 58 19945642 19945661 GAAGTGGCACGTAAATCCTG 59 NA Drosophila melanogaster 61 CG34258 FBgn0085287 FBtr0112452 3 1 1 88 3L 19945010 19945029 ATTTGCTTGGCTCTCAAGTG 59 19944884 19944961 ATTTCATGATCGGCTGAAGAG 58 NA Drosophila melanogaster 61 CG8334 FBgn0036913 FBtr0074890 1 1 1 80 3L 19869925 19869944 TCGATCCGTTTAGTCTGCTC 59 19869983 19870078 CATCCAACAGAATAACCAAGACC 59 NA Drosophila melanogaster 61 trpml FBgn0036904 FBtr0074952 1 1 1 60 3L 19710803 19710821 TCCGTACAAGTTCGTTGTG 58 19710060 19710078 AAGGCACAATTGCATCGTC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG9392 FBgn0036895 FBtr0074948 3 1 1 102 3L 19613781 19613863 CTCGAGCAATACGTATCTCAG 58 19613927 19613945 GAACTTCCAGTGATCGCAG 58 NA Drosophila melanogaster 61 CG14095 FBgn0036870 FBtr0074987 2 1 1 192 3L 19457700 19457788 GTTCAAATACGCCGTTGTC 57 19457526 19457544 AACTTGGGCAATCACTGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9619 FBgn0036862 FBtr0075014 3 1 1 145 3L 19278190 19278331 GATCACAGACAACCGAGGA 59 19278063 19278081 GAAGGAGTCGGACTCATGG 59 NA Nonspecific Drosophila melanogaster 61 fz2 FBgn0016797 FBtr0299586 2 1 4 81 3L 19178804 19192579 TACATCTGATCCAGCCTGAC 59 19153760 19153780 TTTCTGGTTCATTCGATTCCG 59 NA InUTR Drosophila melanogaster 61 CG12477 FBgn0036809 FBtr0075089 3 1 1 153 3L 18716233 18716306 ACCAATCCAATAGAGCAGC 57 18716098 18716116 TAGCAGCCTTGTAGTTGGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32196 FBgn0052196 FBtr0273401 2 1 1 80 3L 18453161 18453338 GTCGGTAAATTAGAGAACTTTCGG 59 18453104 18453122 GGGTACAATTGTAGCGGGA 59 NA Drosophila melanogaster 61 mus304 FBgn0002901 FBtr0075122 2 1 1 96 3L 18103564 18103582 AGGATTGAAGCCCTTAAGC 57 18103641 18103739 GTAAGGAAACCTCACCAGAC 58 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075199 1 1 3 80 3L 17637121 17637145 CCTACATTACACATCCCATAAACAC 60 17636813 17637083 CGTTGACCTTTACGCTGAC 59 NA InUTR Drosophila melanogaster 61 qjt FBgn0036730 FBtr0075223 3 1 1 167 3L 17472338 17472414 AAACCTAATTTCAGGCTAGCC 58 17472543 17472561 CATCGCTGAAATCGGACAC 59 NA InUTR Drosophila melanogaster 61 CG13728 FBgn0036716 FBtr0075238 2 1 1 92 3L 17375414 17375635 CCTGGTGTACACAATAATGTCTC 59 17375344 17375362 TCGTTCAGAGATTGCTGCT 59 NA Drosophila melanogaster 61 CG13723 FBgn0036705 FBtr0075213 3 1 1 60 3L 17257799 17257819 CCCTGGTAATCTACTACTCCT 57 17257841 17257859 TATACGCAATACTGTCGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13723 FBgn0036705 FBtr0075213 1 1 1 60 3L 17257872 17257890 GAAACGCACGAGATTCCTG 59 17257914 17257932 CTACTTCAACTCACCCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6652 FBgn0036687 FBtr0075291,FBtr0075292 3 2 2 80 3L 17014031 17014051 CCTAGAGGAATCAATGGAGGA 58 17013904 17013991 CGTACACTAATGTCCTCATCG 58 NA Drosophila melanogaster 61 CG13022 FBgn0036679 FBtr0273313 2 1 1 60 3L 16931963 16931983 TATGCAGTTCAATGGACAAGG 58 16931923 16931943 ACTCCTATCCAATCTATCGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Int6 FBgn0025582 FBtr0075345 3 1 1 88 3L 16779738 16779851 GCAAGGAGATCTACAACCAG 58 16779669 16779687 GGTGTCCATCGTGTAATCG 58 NA Drosophila melanogaster 61 retinin FBgn0040074 FBtr0075375 1 1 1 93 3L 16325084 16325161 CTAGATTGTTCCTGCCCGT 59 16325218 16325236 AGAGCCACAAGATTCGAGG 59 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0100035,FBtr0301510,FBtr0100036 1 5 5 80 3L 15860578 15860667 CGAAAGCAGTTTGAAATACGAG 58 15860519 15860540 GACTTATTGCCATATTGCAGTC 57 NA Drosophila melanogaster 61 CG33984 FBgn0053984 FBtr0100029 3 1 1 154 3L 15520951 15520969 ATTCGACGAGAGTGTCGTC 59 15520586 15520833 AAGAGTCCACCACAAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 ind FBgn0025776 FBtr0075668 1 1 1 60 3L 15036393 15036411 ATGAACCTCAAGGAAAGCG 58 15036351 15036369 AGTGGTGAGCTATTCGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075736,FBtr0075737 2 2 2 60 3L 14211842 14211863 ATGGCTGGATAATAAGCATGTC 58 14211882 14211902 CTGGACGATATCCATTCCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13738 FBgn0036390 FBtr0075790 3 1 1 60 3L 13966334 13966352 GGTGGTCTACTGTTCCTGG 59 13966292 13966310 ATTTCTCACGGTGTTCGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32135 FBgn0052135 FBtr0075760 2 1 1 60 3L 13961071 13961090 CTACGCATCTTTACGTTGAC 57 13961113 13961131 GTGGTTCCAGAGTATCCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14106 FBgn0260459 FBtr0075858 3 1 1 60 3L 13417755 13417773 TCAGCAGGCTATCACTGAC 59 13417713 13417733 GCGATTGTTCCAAATTGTGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ste14 FBgn0036336 FBtr0075876 2 1 1 96 3L 13012151 13012299 ACTCACTTGGTCCAGAATGAG 59 13012356 13012375 AGAACCAGCCGACATAAGAC 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934,FBtr0273241,FBtr0273240 3 3 3 104 3L 12843424 12843609 GGAGAGTACATACTGCTCCA 58 12843675 12843694 GGAGGTGAGATAAATCCTGC 57 NA Drosophila melanogaster 61 CG11560 FBgn0036249 FBtr0075993 3 1 1 113 3L 12113584 12113603 TATTCTACGCAGTGTGAGCA 59 12113678 12113763 TGATTTCAGAGTCTGCTCCT 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 2 3 6 104 3L 11811260 11811278 GACATTCTACTGCGTGCAG 59 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 CG32086 FBgn0052086 FBtr0076147 2 1 1 108 3L 11576536 11576619 TTAACCGCAGATATGCCCA 59 11576446 11576464 TTCTCACCTTCCTCCAGAC 58 NA Drosophila melanogaster 61 Elo68alpha FBgn0052072 FBtr0076232 3 1 1 80 3L 11095765 11095786 AGGGATCTTGACTACAATTTCG 58 11095623 11095725 AAATGCCTTTGTAAGACGCA 58 NA Drosophila melanogaster 61 CG32075 FBgn0052075 FBtr0076240 1 1 1 80 3L 11057669 11057688 AAAGTTGTTCCTGTCACACC 58 11057549 11057628 ATTAAATTCCAGCGTGTCTCG 59 NA Drosophila melanogaster 61 CG6321 FBgn0036117 FBtr0076242 2 1 1 81 3L 11054003 11054083 CACAGATCATTGTCTGGAACG 59 11053942 11053962 CTCGAATGTTCCACTTGTTGG 59 NA Drosophila melanogaster 61 CG8003 FBgn0036096 FBtr0076260 3 1 1 130 3L 10655711 10655789 GAGGTGGATTACGGACGAG 59 10655883 10655901 TGTGCATGAACCAATGCAG 59 NA Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 3 2 2 61 3L 10626378 10626397 AACGTATCCAGATCCTCCAG 58 10626418 10626496 GGACACGAAGATTGTATTAACC 57 NA DesignNoJunction Drosophila melanogaster 61 Cdk8 FBgn0015618 FBtr0076369 1 1 1 114 3L 9831658 9831678 CAGATAGAGCGTACGAAAGTG 58 9831502 9831582 CTTTGCCATCGCTTGTCTC 59 NA Drosophila melanogaster 61 Ilp2 FBgn0036046 FBtr0076329 3 1 1 88 3L 9792994 9793013 ATAATCCCGTGATTCCACAC 57 9793137 9793155 GAACTCCTGGACAAACTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3280 FBgn0036017 FBtr0273440 1 1 1 80 3L 9597051 9597070 AATTCTACAAAGGACAGCGA 57 9597185 9597523 GCAATGGGAAATCGTTCAG 57 NA Drosophila melanogaster 61 PGRP-LF FBgn0035977 FBtr0076439 2 1 1 81 3L 9343084 9343102 CCTTAAGCTTCCCGTCTCC 59 9343145 9343561 GCGGTATATGCAAACATCCTC 59 NA Drosophila melanogaster 61 PGRP-LA FBgn0035975 FBtr0076434,FBtr0076435 3 2 4 156 3L 9327884 9327902 CAAATCCAGCTATCCAGCC 58 9328022 9329824 TTGCTGTTGATTCCTGCAG 58 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0301139,FBtr0301140,FBtr0076514,FBtr0076513 1 4 4 158 3L 8960298 8960387 GTCAGAAATACACGCACCC 58 8960509 8960527 TCTTCACCGTCCAGAAGTC 59 NA Drosophila melanogaster 61 mRpL12 FBgn0011787 FBtr0076511 2 1 1 149 3L 8949908 8949929 GCTGTTTATCGATAAACTGCTC 58 8950095 8950113 CACTGTACATGCGATGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209,FBtr0300208 1 2 2 80 3L 8889167 8889239 ACTGCAATATGGGATGGGA 58 8889105 8889125 AGGAATCCAAACGAATCTGTG 58 NA Drosophila melanogaster 61 CG6511 FBgn0035923 FBtr0076570 1 1 1 80 3L 8714699 8714771 GAAACGAAGAAATTGAACCGTG 59 8714812 8714830 ACAACTTAATCACCGCCTG 58 NA Drosophila melanogaster 61 Gug FBgn0010825 FBtr0076616,FBtr0076619,FBtr0076617,FBtr0076618 1 4 4 115 3L 8463417 8463435 CTTATACCTAGGGAGCCGC 59 8463573 8463863 GGCCGTTGTCTAAAGTACTG 58 NA Drosophila melanogaster 61 RecQ4 FBgn0040290 FBtr0076729 3 1 1 80 3L 8164266 8164284 AGCAGCTAAAGGCTATCGT 58 8164143 8164224 CGTTACTTGGCTCTATTTCCA 58 NA Drosophila melanogaster 61 CG7492 FBgn0035807 FBtr0076821 3 1 1 134 3L 7646664 7646683 GCCAGTTTCGGTATCTAGTG 58 7646489 7646567 AATGTACTTCACCCGTTGC 58 NA Drosophila melanogaster 61 CG9953 FBgn0035726 FBtr0076898 2 1 1 87 3L 6963905 6963986 ATCACCATTGACGACATCTG 58 6964035 6964054 ATAGCATATCGTTGACCAGG 57 NA Drosophila melanogaster 61 CG9953 FBgn0035726 FBtr0076898 1 1 1 86 3L 6963906 6963986 TCACCATTGACGACATCTG 57 6964035 6964054 ATAGCATATCGTTGACCAGG 57 NA Drosophila melanogaster 61 CG10147 FBgn0035702 FBtr0076987 2 1 1 91 3L 6480890 6480968 GAAAGCTTTGGAAGAGCCG 59 6480817 6480835 TCTTGTGCAGAATCAAGCG 58 NA Drosophila melanogaster 61 CG7386 FBgn0035691 FBtr0076999 3 1 1 104 3L 6184215 6184291 CGAATGCAAGGTTTGTGAC 57 6184356 6184377 TGTTTATAAGTTTCCAGAGCCC 58 NA Drosophila melanogaster 61 CG7376 FBgn0035689 FBtr0076998 3 1 1 80 3L 6170778 6170797 AGCATCTGAAAGAGGATTCC 57 6170837 6170918 ATACCATCATCACATACCTCAC 57 NA Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 1 2 2 183 3L 5927082 5927164 ACAAGATAAAGGGCTTCACCA 59 5926919 5926937 TACATCTCGAAGTCCGCTC 59 NA Drosophila melanogaster 61 CG5592 FBgn0035645 FBtr0077029 3 1 1 168 3L 5891644 5891720 TCACCAAGTTGGCTTATGTC 58 5891851 5891869 GACTGGTGTACTGCTTTCC 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708,FBtr0112711,FBtr0112714,FBtr0112709,FBtr0112710,FBtr0112713 3 7 8 80 3L 5697105 5697123 TAAAGCAAAGGCAACTGGC 59 5697167 5698076 TTTACCGATAGGAAGCCGG 59 NA Drosophila melanogaster 61 CG13285 FBgn0035611 FBtr0077141 3 1 1 130 3L 5528360 5528546 TCGGCCAAGTTGTTAAATCTC 59 5528250 5528269 GGATAGTATCCCGATGAGCC 59 NA Drosophila melanogaster 61 CG34047 FBgn0054047 FBtr0100102 3 1 1 162 3L 5099669 5099688 GATACATTTGGATGCGATGC 57 5099421 5099547 ACCACAAGATAAGTTAGCTGAC 58 NA InUTR Drosophila melanogaster 61 Fit1 FBgn0035498 FBtr0073210 3 1 2 187 3L 4104108 4104213 CGGTGCTGAACTTATAGTTTCG 59 4104361 4104379 CACCAGGTTCAGCATTACG 58 NA InUTR Drosophila melanogaster 61 CG10863 FBgn0027552 FBtr0073171 2 1 1 80 3L 3941674 3941695 ATCCAATTTCAACTCGGAACAG 59 3941559 3941635 TGACATTCGATCTGATTGTGG 58 NA Drosophila melanogaster 61 mge FBgn0035473 FBtr0073176,FBtr0073175 2 2 2 173 3L 3908526 3909016 GAACTACGATGATGAGCCC 57 3908371 3908389 GCGCTGGTGAAGAATATCC 58 NA Drosophila melanogaster 61 CG12016 FBgn0035436 FBtr0073063 2 1 2 264 3L 3319896 3320523 ATCGATGAAGGCAATCCCA 59 3320751 3320769 TACCAATGACCAGCCACTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 ckd FBgn0035427 FBtr0073050 2 1 1 80 3L 3267275 3267433 GTACAATTGCCAGATCTTTCAC 58 3267473 3267492 TTAAAGCTCGTCTCATTGGC 58 NA Drosophila melanogaster 61 CG14956 FBgn0035403 FBtr0073026 1 1 1 80 3L 3155749 3155769 ACTACAACATACTCCACCTGC 59 3155810 3155966 GACTGGGTTTATTCGCAACC 59 NA Drosophila melanogaster 61 yellow-g FBgn0041709 FBtr0072902 2 1 1 131 3L 2271127 2272258 ATCAGAATGGACTTCTGTGGG 59 2271016 2271034 TGAGGTCGATGCTCTTGAC 59 NA Drosophila melanogaster 61 CG32302 FBgn0052302 FBtr0072881 3 1 1 60 3L 2269587 2269608 ATTGATCCTAAGATCCTGACCT 58 2269629 2269647 TCTCAAAGTCCGAGCACTG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 obst-I FBgn0052304 FBtr0072880 3 1 1 60 3L 2268418 2268438 CTCTGGGTACTATCATTGTCG 57 2268458 2268478 TACCGAGCATCTGAAATACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13810 FBgn0035313 FBtr0072870 1 1 1 82 3L 2186040 2186126 TTCCGGATTTGTTGGTCCT 59 2186172 2186190 GTCGTACACATAAGCCGAC 58 NA Drosophila melanogaster 61 CG42357 FBgn0259703 FBtr0299956 2 1 1 80 3L 2020865 2020883 TTCTGGACGAAATCTGCTG 57 2020748 2020824 TAGAGATTCCGGAAAGAAACAG 58 NA Drosophila melanogaster 61 CG11814 FBgn0035296 FBtr0072855 2 1 1 80 3L 1957937 1958012 CGAGATTGAGGGAGTTACAG 57 1957876 1957894 AGTAGTAACACTGCAGCAC 57 NA Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 1 2 2 132 3L 1624585 1624677 TGTAATAGGCATGTTTCCCTG 58 1624473 1624491 GGAAAGCTCTTCCTCTGGA 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 3 2 2 80 3L 1603334 1603355 GTAGAGAAACAAATAGACTCGC 57 1603396 1603472 CGTTGTGGTTCCTATCGAG 58 NA Nonspecific Drosophila melanogaster 61 rho FBgn0004635 FBtr0072694 1 1 1 132 3L 1465699 1465717 CATCTACATGCAACGCGAG 59 1465810 1466498 GATGGCAATCTCAATGATGGAG 59 NA Drosophila melanogaster 61 bab2 FBgn0025525 FBtr0072639 1 1 1 80 3L 1143393 1143413 GGACTATCGCGAGATTAAGGA 59 1142905 1143353 CCTCCTCCGATATAGGTACCA 59 NA Drosophila melanogaster 61 CG13897 FBgn0035160 FBtr0072601 1 1 1 83 3L 738721 738995 AATGGATGTTGAGCTTTGCC 59 738657 738675 TTCAAGATCCCACTACGCC 59 NA Drosophila melanogaster 61 CG13895 FBgn0035158 FBtr0072605 3 1 1 108 3L 707611 707899 GTACTCTGACAATGATGACACC 58 707524 707542 CACAATGTCGTACTGTCGG 58 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 2 4 4 96 3L 177449 177469 CGAGAACAATGGCATTATCCA 58 177320 177392 GAACGGTTGTGCTAAGATGG 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-1347a FBgn0083054 FBtr0113513 2 1 1 79 2R 14030353 14030374 GACTAAGATTCAATGTTGCCAG 57 14030413 14030432 TTCTACTTCTGTGGATGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR14499 FBgn0034317 FBtr0086751 1 1 1 60 2R 14075373 14075392 GAAGAACTTCTTCGGATCGT 57 14075414 14075433 TTGCTAAAGCTCAGAAGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33354 FBgn0053354 FBtr0086346 1 1 1 60 2R 15653374 15653392 ATACATCGGTTCTCGTCCG 59 15653332 15653350 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30201 FBgn0050201 FBtr0071983 2 1 1 63 2R 18959594 18959612 CGAGTGGTTAAGGAGATGG 57 18959549 18959567 GACAGGACTTGAACCTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072391 2 1 2 117 2R 20826352 20826501 CAGCTGAGCACCATAACTG 58 20826582 20826600 CGTTGTCATACCCATTGCT 58 NA Drosophila melanogaster 61 CG2857 FBgn0035078 FBtr0072419 3 1 1 60 2R 20787151 20787169 AAGGCAGGACTGATGAGTG 59 20787109 20787130 TATAGTGGCGCTTAAACATGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NaCP60E FBgn0085434 FBtr0112670 1 1 1 80 2R 20799625 20799644 ATGGGTGTTCAGTTCTTTGG 58 20799685 20799784 GTTAACCTCAGTAATCGGCAG 58 NA Drosophila melanogaster 61 ST6Gal FBgn0035050 FBtr0072441,FBtr0072442 2 2 2 99 2R 20579778 20579858 GGTGAATTCGCAAGTGGTC 59 20579697 20579715 ATTGTACTTGCCCGGATCC 59 NA Drosophila melanogaster 61 betaTub60D FBgn0003888 FBtr0072270 2 1 1 112 2R 20193648 20198249 AAATCGGCGCTAAGTTCTG 58 20198324 20198343 GTTGTAGTAGACACTGACGC 58 NA Drosophila melanogaster 61 CG3163 FBgn0034961 FBtr0072165 2 1 1 60 2R 19917656 19917675 AGCCAATCACATAACACGGA 59 19917698 19917716 GTTGTCCTCCGAAATCTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5602 FBgn0034922 FBtr0072132 1 1 1 86 2R 19778248 19778325 GTTCCTAAGATTGATGCGAAGAC 59 19778370 19778389 TACCTTGGGCTTAGTTTCCG 59 NA Drosophila melanogaster 61 Nxt1 FBgn0028411 FBtr0072241 3 1 1 186 2R 19699394 19699469 TGGACAGCGATTTGAAAGC 59 19699156 19699174 TCCTGAAAGTAGCTCTCGA 57 NA DesignRelaxed Drosophila melanogaster 61 Ssrp FBgn0010278 FBtr0072242 1 1 1 228 2R 19694881 19694899 GACTCGGATGAAGAGTCCA 58 19694611 19694690 TGGAGGGTTTCTTTGTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0302125 1 1 13 81 2R 19547150 19547168 AATCTTGGGCGTTCTTCTC 57 19547207 19547925 CTCTAGACTAGAATTCAGAACTCTG 58 NA InUTR Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072102 3 1 4 134 2R 19496194 19502203 GAACGCAGTTGCTGTAAGG 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG3124 FBgn0034840 FBtr0072046 2 1 1 178 2R 19170824 19170842 AGTCAGCCTATGCAGAGTC 58 19170588 19170682 ATCGATGGTGCGTTTAGAC 58 NA Drosophila melanogaster 61 blw FBgn0011211 FBtr0071883 2 1 1 90 2R 18687974 18688084 CAGACTGGTAAGACCGCTC 59 18688138 18688156 TGCAGTACAGCTTCTTGGA 59 NA Drosophila melanogaster 61 Obp59a FBgn0034766 FBtr0071870 1 1 1 135 2R 18590574 18590675 AGATGAATATGGTGGATGGCA 59 18590772 18590790 CTCTCCAGATAGCGGAAGC 59 NA Drosophila melanogaster 61 rad50 FBgn0034728 FBtr0301668 2 1 1 101 2R 18309158 18309176 CATATTCGGCATCACCGAG 58 18309241 18309314 TGCTTTATGTTGGCCTCCT 59 NA Drosophila melanogaster 61 qkr58E-2 FBgn0022985 FBtr0071828 3 1 1 142 2R 18303860 18303940 TAATTGACGAAGCTCTGGAG 57 18304042 18304063 CACATAGTTGAACTTCTTGTCC 57 NA Drosophila melanogaster 61 Oatp58Db FBgn0034715 FBtr0071778 1 1 1 80 2R 18110763 18110837 TTACAGAGATTTGCGACTGC 58 18110702 18110720 ATAGGTAAAGGCCATGGCC 59 NA Drosophila melanogaster 61 CG17974 FBgn0034624 FBtr0071611 1 1 1 80 2R 17236920 17236938 TCTGGTTCAACGAGTTCGA 59 17236799 17236878 GACCGTAGTCCTCAAATATGG 58 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 3 5 5 102 2R 17204056 17204074 ACGATCTTCTACCATCGGC 59 17204137 17204215 TCTACGACATGGATATGATGGG 59 NA Drosophila melanogaster 61 CG9437 FBgn0034599 FBtr0071575 3 1 1 60 2R 17057116 17057134 AATTCATCCGGAAATCGCT 57 17057156 17057176 GTTAGACTCAATAGGCTCAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mago FBgn0002736 FBtr0071569 3 1 1 150 2R 17016321 17016340 CAAGAACGACACCATGATCC 59 17016453 17016529 GATCTCCAGTTCCTGTCGA 58 NA Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112644 3 1 2 80 2R 16981401 16987725 GATTTACACGACCATAGGTTACG 59 16987764 16987783 ATGATGGCATAGACGATGGT 59 NA Drosophila melanogaster 61 CG9313 FBgn0034566 FBtr0071521 2 1 1 80 2R 16869958 16869976 GAAGATGAACGTCACCGAC 58 16870020 16870100 ATGAAGTCATGCGATCCGA 59 NA Drosophila melanogaster 61 CG13426 FBgn0034510 FBtr0086295 3 1 1 184 2R 16400503 16400576 ATGTGCCAAGAGGAGTGTC 59 16400337 16400355 TGCTGATACGCTGGAACTC 59 NA Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0112774,FBtr0273284,FBtr0112775,FBtr0112776 1 4 4 80 2R 16355269 16355718 GCTGGACATACGATTTGCTC 59 16355761 16355779 ACCTTGACAGTCTCATGCC 59 NA Drosophila melanogaster 61 CG13870 FBgn0034506 FBtr0086287,FBtr0086288 3 2 2 179 2R 16232031 16232161 TCTTCCTTTCAAATGCCCG 58 16232304 16232322 GAAACAGGTGCGGATTAGG 58 NA Drosophila melanogaster 61 CG34199 FBgn0085228 FBtr0112392 3 1 1 153 2R 16175136 16175213 TGACAAAGTTGCTTCTACTGC 59 16175328 16175346 CTTGATCGGATAGCAGGCA 59 NA Drosophila melanogaster 61 CG8654 FBgn0034479 FBtr0086340 3 1 1 83 2R 15870486 15870507 CTACTACTGGTTCTATTGCCTC 57 15870551 15870631 ATCAGCAAGACGAAACTGG 58 NA Drosophila melanogaster 61 CG30447 FBgn0050447 FBtr0300422 2 1 2 86 2R 15834740 15834836 TATCAAACTCCGGAAGCAGG 59 15834884 15834903 ACGTAAGTCGCTACTAGTGG 59 NA InUTR Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086581,FBtr0086580 1 2 2 103 2R 15024950 15024969 AATCGCATTAATTGCTCCAG 57 15025035 15025334 AAGCATGATGACCACTCAC 57 NA InUTR Drosophila melanogaster 61 botv FBgn0027535 FBtr0086579 2 1 1 90 2R 15017991 15018069 GAATCAAGAGCACCGTGTC 58 15018122 15018141 ATCTTCTGGTTGTACTGGCT 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 2 4 4 144 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646370 14646453 CGAAATTGCTTAAACCCTGCT 59 NA Drosophila melanogaster 61 CG18537 FBgn0034323 FBtr0086759 1 1 1 117 2R 14183718 14183799 TGAGGAGACAATGGTGGAG 58 14183879 14183898 GTAGGAGTTGAGGTAGTCGT 58 NA Drosophila melanogaster 61 CG14491 FBgn0034284 FBtr0086803 2 1 1 60 2R 13782922 13782940 GGATTCCGTTCGGATATGG 57 13782963 13782982 ACAGATTCATGTCCGTTTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30325 FBgn0050325 FBtr0086821 1 1 1 60 2R 13766610 13766629 CGAAGATACAACATTTGCGT 57 13766569 13766592 CTGGAAGATTGCTTACTATGTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 olf186-F FBgn0041585 FBtr0086795 2 1 5 155 2R 13731906 13738566 CCAGCAGAAATACAGACGT 57 13738685 13738703 ATCACTGCAGAACTTCTCG 57 NA InUTR Drosophila melanogaster 61 Klp54D FBgn0004377 FBtr0086826 3 1 1 80 2R 13448597 13448617 TGATTAAGAATCGCAAGGACG 58 13448659 13448995 GCAAATCGATTACCCGCTC 59 NA Drosophila melanogaster 61 CG30103 FBgn0050103 FBtr0086929 2 1 1 80 2R 13381926 13381946 ATAAGACCGGATACCAAGGAG 58 13381987 13382065 TGTTTCCTTATTGATGGCGG 58 NA Drosophila melanogaster 61 veil FBgn0034225 FBtr0086926 2 1 1 80 2R 13367705 13367725 CTTGGTTCACCGTCTATAAGG 58 13367767 13367849 GGTTGCCCAGAGAAATAGC 58 NA Drosophila melanogaster 61 mthl3 FBgn0028956 FBtr0086955 2 1 1 87 2R 13336830 13336848 ACTTCAATTGGTCACAGGG 57 13336699 13336780 CCCTTAATCCGTTCCTTCAG 58 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994,FBtr0290299 3 2 7 114 2R 13260659 13261334 AACTGAAGATGACAAGGTCG 58 13261411 13261429 CAGGACAATCGGTATGTGG 58 NA Drosophila melanogaster 61 CG11395 FBgn0034200 FBtr0086987 1 1 1 89 2R 13024910 13025007 TGGATATCCGAACCATCATCG 59 13025058 13025076 AAGACAAAGGGAGGTGGTC 59 NA Drosophila melanogaster 61 CG8910 FBgn0025833 FBtr0087071 1 1 1 108 2R 12764587 12764605 TGATGGACATCCAGAACCG 59 12764428 12764517 GTGGAGTAACGAAATCTGGGA 59 NA Drosophila melanogaster 61 CG5859 FBgn0025830 FBtr0087036 3 1 1 81 2R 12741180 12741198 ACTCTGCTGGAGTTCATCG 59 12741242 12741329 TGCCCATCATAGAAATCGCT 59 NA Drosophila melanogaster 61 CG4409 FBgn0034128 FBtr0113085 1 1 1 111 2R 12331525 12331543 GTACGCCCTATTCTTCGAC 57 12331618 12332182 CATTGAGTTCTGCAAACCG 57 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0290009,FBtr0100001 2 2 2 80 2R 12313406 12313426 CGATCATGAATTTGGCAATCC 58 12313467 12314011 TCGATCCGTATCTTGTCCAC 59 NA Drosophila melanogaster 61 CG8060 FBgn0034113 FBtr0087178 1 1 1 80 2R 12206970 12207037 CCACATTGATCAAGCTTCCTG 59 12206910 12206930 CCTCGTTGTAAATTACCGTGG 59 NA Drosophila melanogaster 61 JhI-26 FBgn0028424 FBtr0087139 3 1 1 90 2R 12178245 12178439 GGATTTCCTAAGTCGCGGT 59 12178491 12178511 CAAACTCATGAGGAAACTGGC 59 NA Drosophila melanogaster 61 CG30094 FBgn0050094 FBtr0087233 3 1 1 108 2R 12029788 12029865 TTTCAATGGCAGACGATCC 58 12029934 12029955 TTGTTTGTCCCATAGTCAACTC 58 NA InUTR Drosophila melanogaster 61 CG8388 FBgn0034062 FBtr0087263 2 1 1 80 2R 11898654 11898735 TTCTGGCTTCAGATCCCTG 59 11898592 11898611 GTTGTGAAAGAGCAGTAGCT 58 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 2 3 3 80 2R 11812361 11812438 CAGGATCGTTTGAGAATCCC 58 11812300 11812323 GATAGGAAAGCAGATAAGGATTGG 59 NA Drosophila melanogaster 61 CG8214 FBgn0034037 FBtr0087320 1 1 2 80 2R 11576215 11576285 TTCGTTTAACTCGCTGTTGC 59 11576154 11576172 TTGTATCGATGCAGGGTGG 59 NA Drosophila melanogaster 61 Ranbp11 FBgn0053139 FBtr0087278 3 1 1 65 2R 11572391 11572409 CCTCTACAGCGTGATCGAG 59 11573739 11573758 TCTTCGATGAGGTAGACGTG 59 NA DesignNoJunction Drosophila melanogaster 61 Khc-73 FBgn0019968 FBtr0087356,FBtr0087357 2 2 2 80 2R 11407473 11407493 GCAATAATCTGAGCAACGAGG 59 11407357 11407433 AGTTAACGCGATCGAAATCTG 59 NA Drosophila melanogaster 61 Hr51 FBgn0034012 FBtr0114456 2 1 1 89 2R 11219144 11221094 TTCTCAAGAACTCCACAGTCC 59 11221145 11221163 CCCGTTGATGTAGGTGGAG 59 NA Drosophila melanogaster 61 mRpL41 FBgn0034001 FBtr0087400 1 1 1 60 2R 11104804 11104822 CGGACATCATAGTTCCCGA 59 11104762 11104781 GCCTTATAGGACACGTATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sfp51E FBgn0259966 FBtr0300323 2 1 1 125 2R 11080575 11080593 AACCTCCAGATACTTGCCG 59 11080405 11080423 ACTTCAGGTCTTGGATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7544 FBgn0033994 FBtr0087417,FBtr0300324 3 2 2 81 2R 11035855 11035926 TATAGATATAGGCTGCGGCTC 58 11035969 11035987 TTCCAAAGCCAACATGTGC 59 NA Drosophila melanogaster 61 CG7639 FBgn0033989 FBtr0087424 2 1 1 84 2R 10876367 10876447 CGGCCTGAAATGTCTTTCAG 59 10876302 10876322 CCAAATAGCCTATGTTGGTGG 59 NA Drosophila melanogaster 61 CG30479 FBgn0050479 FBtr0087479 2 1 1 242 2R 10562433 10562451 ATGTCGGCATCAATATCGG 57 10562209 10562227 GTCAGAGAATAGTGCAGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ttv FBgn0020245 FBtr0087495 1 1 1 80 2R 10450520 10450538 GACTACGAGACCTTACTGC 57 10450580 10450773 TTCGAGGAATCTAAAGGAACC 57 NA Drosophila melanogaster 61 CG10104 FBgn0033933 FBtr0087486 3 1 1 60 2R 10279106 10279125 ATGGATTCAGCAGTTATCCG 57 10279146 10279166 CGATAATCACTTCACATCCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0112614 3 1 3 82 2R 10214665 10215228 ATCTCCGAATCGGTTTCCTC 59 10215273 10215291 ACGCTCTCGCTATGATGAC 59 NA Drosophila melanogaster 61 CG13337 FBgn0033863 FBtr0087626 1 1 1 60 2R 9553652 9553670 TGGAAGAGTGCGAATACGA 58 9553692 9553712 GTCTTATTCTTCTCCTGTGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 2 6 6 80 2R 9385033 9385132 CTCCTTATCAGTCAAATGCCC 58 9384973 9384992 ACCCAGAGGAAGAATTTGCT 59 NA Drosophila melanogaster 61 CG30060 FBgn0050060 FBtr0087714 1 1 1 60 2R 9310877 9310896 CTATCACACGCTGATGATGG 58 9310836 9310856 GAGCCACTCCGTATTATTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 2 4 6 141 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151378 9151396 TTCTCAATGGTGTTCGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4663 FBgn0033812 FBtr0087761 1 1 1 103 2R 9116861 9116879 CACGAACTTTGTACGGCTG 59 9116721 9116798 GCAGCCAATAGAGAATCTTTCTG 59 NA Drosophila melanogaster 61 GLaz FBgn0033799 FBtr0087772 1 1 1 92 2R 9052243 9052261 TTTGAGCCGTACAACAAGG 58 9052111 9052187 CGGATTACCAGTTATGCGA 57 NA Drosophila melanogaster 61 CG15870 FBgn0033798 FBtr0300670 2 1 1 88 2R 9051123 9051141 GAGGATATGGCGGATATGG 57 9051053 9051071 ATAGGGTACGGGAAGAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3955 FBgn0033793 FBtr0087780 2 1 1 149 2R 9016008 9016095 TTCATCTGCATGGTCAAGC 58 9015877 9015895 GCAGGAATAGAGCTTGGTC 58 NA Drosophila melanogaster 61 CG30486 FBgn0050486 FBtr0087817 2 1 2 83 2R 8736402 8736422 GCGTTATCTACGGATTACTGC 59 8736289 8736358 GTCAAAGTCGCCATAATTGC 58 NA Drosophila melanogaster 61 Iswi FBgn0011604 FBtr0087842,FBtr0087841,FBtr0087843 1 3 3 91 2R 8527415 8527433 GGATCGCTTTCTGGTATGC 58 8527488 8527567 GCGGAGAAGCTCTTATAGC 57 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 1 2 2 97 2R 8378092 8378110 AACCAAGGAGTCACCAAGG 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 CG13159 FBgn0033721 FBtr0087912 3 1 1 69 2R 8262876 8262894 GAAGTTCTTCGCTGTCCTC 58 8262927 8262945 TGTAGTTGCGGTAGATGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30046 FBgn0050046 FBtr0087895 1 1 1 80 2R 8203100 8203176 TCCCACCTATACGTCATCC 58 8203220 8203238 GGATCATTGGGAAAGTCGG 58 NA Drosophila melanogaster 61 DebB FBgn0000426 FBtr0088010 3 1 1 79 2R 8071535 8071553 AACACGGAGGAAGTGATCG 59 8071474 8071494 ATATACAGCACGTTGTTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30026 FBgn0050026 FBtr0300922 3 1 1 110 2R 7296454 7296472 TACCTCCCGTTTCTTCCAC 59 7296309 7296382 AACCCACTCCATAACAATCAC 58 NA Drosophila melanogaster 61 CG13203 FBgn0033628 FBtr0088130,FBtr0100284 1 2 2 178 2R 7263254 7263272 ACCCGATGTGATTACCCTG 59 7263414 7263754 GATAGCTGTCCGATTTGCC 58 NA Drosophila melanogaster 61 CG18004 FBgn0033566 FBtr0089729,FBtr0089727,FBtr0089728 2 3 3 60 2R 6773101 6773123 GAGTACTTCCAGGATCTATTGCA 59 6773143 6773161 GATCCCGGGAAACTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 2 3 3 91 2R 6527407 6527427 CAATCATACAAGTTGTGCGTC 58 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 Ir47a FBgn0033515 FBtr0088323 1 1 1 60 2R 6266225 6266245 TCCAAGACGTAAGAAGATCCT 58 6266185 6266206 CAGAATGCAACTAAATACCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675 2 1 2 61 2R 5974531 5974552 GTTAGAGTGTAATTTGCCTCTG 57 5974445 5974465 AATAAACTGAGTGGCAGTTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12920 FBgn0033481 FBtr0088404 1 1 1 87 2R 5957562 5957642 CTTGATCATCCTCCTTCGTC 57 5957692 5957710 AAGGAGCATCATAGTGCTC 57 NA Drosophila melanogaster 61 Mef2 FBgn0011656 FBtr0088444,FBtr0088443,FBtr0088447,FBtr0088445,FBtr0088446 2 5 5 89 2R 5806136 5806224 ATGCAGATCAACGACAGAG 57 5806065 5806084 CAAAGGAATAGCTCGTGAGG 58 NA Drosophila melanogaster 61 lectin-46Cb FBgn0040092 FBtr0301706,FBtr0088475 2 2 2 73 2R 5703154 5703225 AAAGATGAACTGGTTTGGCG 59 5703261 5703279 TTTGGTTACTCAAGTCCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42347 FBgn0259678 FBtr0299929,FBtr0299930 1 2 2 81 2R 5608218 5608239 CAGAAGTTGTGAACTTTGACTG 58 5607468 5608176 CCTGAGATGAGCACATAGC 57 NA Drosophila melanogaster 61 CG30340 FBgn0050340 FBtr0088535 1 1 1 88 2R 5488018 5488037 GCTTATCTGCTACATAGCCA 57 5487890 5487908 TATAGCTCACTGTCAGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Wnt2 FBgn0004360 FBtr0088512 2 1 1 210 2R 5389083 5389485 CATACCCACAGCTTCTCGT 59 5389659 5389677 ATACCGCATCCCAAAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33757 FBgn0053757 FBtr0091758 1 1 1 146 2R 5342181 5342263 ATGTTCATATGCGTTTGGAGC 59 5342055 5342077 GGATGTAAGGTTTCAGATACTCG 58 NA Drosophila melanogaster 61 wun FBgn0016078 FBtr0088553,FBtr0088552 2 2 2 80 2R 5291860 5291878 GTTCCACGATTCTACGGTC 58 5291417 5291816 TCCACGATGAATATCACGC 57 NA Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 2 1 1 74 2R 5287556 5287762 GAACGTGTTACTGTCTGCA 58 5287500 5287518 CAGAAATACGCCCAGAACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 unpg FBgn0015561 FBtr0088586 1 1 1 80 2R 5083612 5083630 CATTAGCCTGACCATGTCG 58 5083671 5086606 CTATCCGAATTGGTATAGGCTC 58 NA Drosophila melanogaster 61 CG30345 FBgn0050345 FBtr0088584 3 1 1 81 2R 5037270 5037289 ATAGTAAGCCTCTTCCTGGG 58 5037332 5037417 AAAGGTAGCCTGTAAACGTG 58 NA Drosophila melanogaster 61 CG13744 FBgn0033363 FBtr0088666 2 1 1 104 2R 4902914 4902991 TCCCATCATAACCACACTGG 59 4902829 4902847 ATGTGTCCATCGGAGTGTC 59 NA Drosophila melanogaster 61 Tom7 FBgn0033357 FBtr0088657 3 1 1 104 2R 4839308 4839326 CCGAGGGAGTTAAGGATCG 59 4839388 4839521 CTCCCTTCATAAATCCCAAATACAG 59 NA Drosophila melanogaster 61 CG8247 FBgn0033348 FBtr0290033 2 1 1 80 2R 4809778 4809855 ACCACAGTCTCGGTAAGTC 58 4809716 4809736 TTCGCTGTAAAGATGCATGAG 59 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 2 1 1 63 2R 4788344 4788414 AGAGACCAATGGCAAAGCT 59 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG30350 FBgn0050350 FBtr0088636 2 1 1 60 2R 4714709 4714727 GGTCCAGCTGTACACAGAG 59 4714751 4714769 CATGCAGGACTTGATCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 3 9 9 80 2R 4568219 4568302 CATGGACTACCGTGATATGAC 58 4568343 4568362 TCTTCCCAGTTGACTAGACG 58 NA Drosophila melanogaster 61 Vps25 FBgn0022027 FBtr0088694 3 1 1 82 2R 4513068 4513140 CACCCTTCTTTACACTACAGC 58 4513178 4513202 GAGGTATTTGAGAAAGAGATCTGTC 59 NA Drosophila melanogaster 61 CG42326 FBgn0259226 FBtr0299787,FBtr0299788 3 2 2 130 2R 4461685 4461703 GCCAAGAATCTGATCACGG 58 4461496 4461593 ACAAAGCACCATGGATAATCG 59 NA Drosophila melanogaster 61 CG12780 FBgn0033301 FBtr0088736 2 1 1 60 2R 4439613 4439634 TTGTTGATCTTGGGAATCAGAC 58 4439574 4439592 CGGCCATCTTTATCCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 boly FBgn0050362 FBtr0088769 2 1 1 66 2R 4253825 4253843 GAGTGGATTGACGTCAAGG 58 4253777 4253796 ACCAAATTCATACGGATCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rs1 FBgn0021995 FBtr0088788 3 1 1 87 2R 4053358 4053376 CGACATTGTCATTGCAACG 58 4053424 4053629 AATGAGAACCTCAATGGAATCC 58 NA Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 1 2 2 60 2R 2771946 2772025 AAAGAGACCTTAGAGAAGCTGG 59 2772045 2772064 CGCTTAAGTCTGACTTGTCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG3267 FBgn0042083 FBtr0086126 2 1 1 104 2R 2635620 2635695 ATATTACTGGCTTCATGGTGG 57 2635761 2635779 TGAACTTGGGCACATTAGC 58 NA Drosophila melanogaster 61 Opbp FBgn0050443 FBtr0086109 3 1 1 80 2R 2542547 2542568 TACATAAACGCTGTGGTAAACG 59 2542609 2542688 ATCCACGTCAAACACAACG 59 NA Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 2 1 1 76 2R 1541421 1541491 AAACCTGATGGTCTACCGC 59 1541531 1541549 CAAGATACTTCCGTCCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081 3 1 3 177 2R 1032363 1035724 AACGATTTATCGCTGTTGGG 59 1035862 1035882 CTGAAGTTATTGGGTTTGACG 57 NA DesignNoJunction Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 3 6 6 109 2R 1008349 1008368 TATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Ir41a FBgn0040849 FBtr0299925 1 1 1 80 2R 863356 907828 ATCCAAATTGATTCATCTGCCG 59 907869 907887 AAGCATACCAAGAGCACCA 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2263 FBgn0082990 FBtr0113537 2 1 1 60 2L 5187848 5187866 CGATTATTGGATGCTGGCG 60 5187888 5187908 TTATGGAGTGATGCGATTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U2:38ABb FBgn0003923 FBtr0081293 1 1 1 60 2L 19812710 19812729 TAGTTCCTCCATTGGAGGAC 58 19812752 19812770 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 1 1 1 60 2L 22443181 22443205 GCGACGTATATCAAGAACTTATACC 59 22443220 22443300 TTTGCTCCATTAATCGATTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 RpL5 FBgn0064225 FBtr0111129,FBtr0301561,FBtr0111132 2 3 3 106 2L 22428776 22428854 GGATCCAGGTTGGATTGAC 57 22428688 22428706 GCATCCTGCATATAGGGAG 57 NA Drosophila melanogaster 61 CG3262 FBgn0032986 FBtr0299875,FBtr0299874 1 2 2 143 2L 22239992 22240010 CAGGTGAAGTTAATGGCGC 59 22240183 22240201 GCAATCCTACTCGCTTTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG41434 FBgn0084001 FBtr0111262 3 1 1 60 2L 22038812 22038833 TATACCCTTACGTACTACTGGA 57 22038854 22038872 TTCTTCTCTTGCGATCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His4:CG33869 FBgn0053869 FBtr0091873 1 1 1 60 2L 21534187 21534205 GAACGTAATTCGTGATGCC 57 21534145 21534163 GGCTGTAACTGTCTTCCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8665 FBgn0032945 FBtr0081517 3 1 1 113 2L 21376165 21376183 TGTGATATGGACAAAGCCG 57 21376676 21376694 AAATTCGTCGTGTATCCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG33510 FBgn0053510 FBtr0300360 3 1 1 82 2L 21083659 21083678 GTTGAGTTCAGAAAGTGGCT 58 21083532 21083614 GCTAAGACAGCTCTTAGGC 57 NA Drosophila melanogaster 61 CG16772 FBgn0032835 FBtr0081302 3 1 1 89 2L 19962743 19962832 CTAATTAGCCAGCTGCTGG 58 19962885 19962903 CTCTTCGCTGTAAAGCGAG 58 NA Nonspecific Drosophila melanogaster 61 CG33116 FBgn0053116 FBtr0081249 3 1 1 84 2L 19533811 19533829 GAGGCAACTATTCAGACGC 59 19533875 19534158 GGCACTGTACTTGTAGTTGTC 59 NA Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 1 2 2 86 2L 19009004 19009022 AAGCAGACCTTGAAGACCC 59 19008531 19008954 GATCTCGGACTTCCTCAGG 59 NA Drosophila melanogaster 61 CG15169 FBgn0032734 FBtr0081136 2 1 1 60 2L 18991478 18991496 CTCAAGTTCCTCAAACCGA 57 18991517 18991538 GAGTCCGAAGTATCCATATGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10570 FBgn0040992 FBtr0081122 2 1 1 234 2L 18810679 18810831 TGAAGCAAGCAAGATTGGG 58 18810463 18810481 GTACGTTCGGTGTAGACCA 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG5674 FBgn0032656 FBtr0081021 2 1 3 89 2L 17971990 17972267 GATTCCGCAAGAAGTTGAC 57 17972320 17972338 TTCGCTTGATTCGTTTCCT 57 NA Drosophila melanogaster 61 BicD FBgn0000183 FBtr0081002 2 1 1 80 2L 17463873 17463996 ACCTTACAGGGTGAACGTG 59 17463811 17463830 GTGGTACATAGACTCACGGT 59 NA Drosophila melanogaster 61 esg FBgn0001981 FBtr0080734 1 1 1 60 2L 15334475 15334495 TATCCCTGGAACAACTTCCAC 59 15334514 15334535 GATTGATGGTCCTGTAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GABA-B-R1 FBgn0260446 FBtr0080697 2 1 1 80 2L 15030677 15030755 TGTGCCAAAGGTCATTGAG 58 15030799 15030817 TTCGATATGGCTGAATCGG 57 NA Drosophila melanogaster 61 CG3473 FBgn0028913 FBtr0080661 1 1 1 60 2L 14563336 14563354 TTCCATCCAAACATCGACC 57 14563294 14563315 TCCATTTATCCTTCAGGATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 3 5 5 80 2L 14321173 14321191 ATAGGAAGAGCAGCTCCCT 59 14321234 14321317 TCGACAGTTCTGACAGACTC 59 NA Drosophila melanogaster 61 rk FBgn0003255 FBtr0301918,FBtr0080610 1 2 2 80 2L 13985571 13985646 CCGCAAATGCATAATCTCAG 57 13985510 13985531 CTCTTCGTTGAAGTTAATAGCC 57 NA Drosophila melanogaster 61 nimC1 FBgn0259896 FBtr0080615 3 1 1 80 2L 13975875 13976495 GTATTATACAGACGAAGAGACTGC 59 13975818 13975836 TTCTCAACGGATCCTTCGT 58 NA Drosophila melanogaster 61 nimB5 FBgn0028936 FBtr0302501,FBtr0080586 1 2 2 80 2L 13971670 13971748 CGATTGCTATCAGAAGTGCA 58 13971790 13971809 TCATGGTAGGTATATCCCGG 57 NA Drosophila melanogaster 61 CG33643 FBgn0053643 FBtr0091620 3 1 1 124 2L 13531336 13531354 ACGAAGGTCGATTAGATGC 57 13531441 13531512 GTTGAAGTTCGCTTTCAGAG 57 NA Drosophila melanogaster 61 B4 FBgn0023407 FBtr0080514 3 1 2 194 2L 13547154 13547762 CCTTTGCTCAGACGAAGTG 58 13546978 13546996 TGTATCTGTGAGTGCTGCT 58 NA InUTR Drosophila melanogaster 61 CG16849 FBgn0032526 FBtr0080503 2 1 1 172 2L 13457863 13459929 ATCGATCATTCGTTTGGCC 58 13460062 13460083 CCAATAGAGCTCTTAGTTCCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG16813 FBgn0032490 FBtr0080446 1 1 1 60 2L 13228053 13228072 GATTGTGGCTACATCGACAC 59 13228095 13228113 CATGTTAGCGTGGTAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Vha68-1 FBgn0020368 FBtr0080429 1 1 1 65 2L 13001498 13001571 ATGAAGTTCAAGGACCCGG 59 13001451 13001469 GTACAGCTGGTCGTAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 2 2 2 99 2L 12693402 12693483 TCTTCAAGAACCGACCCAG 59 12693546 12693564 GAGTACTCGATTTCTCCGC 57 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 2 1 8 82 2L 12516486 12516504 AGCGGATACCGTTATCAGC 59 12458214 12477123 TGACCAGATCCATTGCCTG 59 NA Drosophila melanogaster 61 zuc FBgn0261266 FBtr0080316 2 1 1 60 2L 11989411 11989430 TTATCCGGATCATCAGCGAC 59 11989370 11989390 AGCATACTGATCTGAGAACCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6686 FBgn0032388 FBtr0089572,FBtr0301171,FBtr0089573 2 3 3 81 2L 11984778 11984797 ACATAAGTTCCATGGCAAGG 58 11984654 11984734 TTTCATTAGCCCATCCTGC 57 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 2 3 4 82 2L 11799399 11800170 ATACTTTGGCATACAGGCGA 59 11799336 11799354 TGGTTAAGCAAGTGCTCCT 59 NA Drosophila melanogaster 61 CG14929 FBgn0032365 FBtr0100456 1 1 1 84 2L 11518877 11518895 GAAGATCGAGAGGCTGGAG 59 11518943 11519018 TTCCGTTACAAAGCGAAGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Gr32a FBgn0041246 FBtr0080198 1 1 1 60 2L 11115556 11115577 TTTGCGATAGATAACTCCACAC 59 11115670 11115690 TTACCAAGTATGTTGTGACGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG17118 FBgn0032291 FBtr0080111 3 1 1 82 2L 10730365 10730443 AACAACTGGTCTTCCTATACCA 59 10730486 10730504 ATTATCTCGAGCACCAGGG 59 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819,FBtr0080101 2 2 2 80 2L 10649584 10649661 AAGAGCTTCAATACGACCC 57 10649702 10649723 ATAGTGATAGATCTGTTTGGCG 58 NA Drosophila melanogaster 61 CG5168 FBgn0032246 FBtr0080020 1 1 1 80 2L 10424920 10424999 AAAGCAGCTGGGAATACGA 59 10425041 10425061 TTAATGCGATTGGTGGAACAG 59 NA Drosophila melanogaster 61 CG5731 FBgn0032192 FBtr0079959 3 1 1 80 2L 10207543 10207563 AACTCCATCGGATATTTCGGT 59 10207420 10207501 TCGTAAAGGTCCTCCACTC 58 NA Drosophila melanogaster 61 CG5853 FBgn0032167 FBtr0079894 2 1 1 80 2L 9941636 9941715 TTGACTGTTCTGACTTTCCC 57 9941575 9941594 GTAGGCTTTGAGTGAGTACC 57 NA Drosophila melanogaster 61 FKBP59 FBgn0029174 FBtr0079872 1 1 1 80 2L 9889398 9889470 AGCAGGAGTGTAATGAGGT 58 9889514 9889532 TAGTCAAGTTGCATTGGCC 58 NA Drosophila melanogaster 61 ppk11 FBgn0065109 FBtr0100831 2 1 1 80 2L 9773420 9773438 TGTCTACTACGACTCAGCG 58 9773283 9773380 CCAAAGGTTCCTATGAATGTCAG 59 NA Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 2 2 2 91 2L 9059847 9060725 TACCTAAACGTTGTCGTTCC 58 9059775 9059793 CATCTCAGCGAAATGTTGG 57 NA Drosophila melanogaster 61 CG9463 FBgn0032066 FBtr0079744 1 1 1 85 2L 8768645 8768665 GTTCTGTAAAGAACTTGGCCA 58 8768522 8768602 GGGACATGACTCATAACAAACAG 59 NA Drosophila melanogaster 61 Dh31 FBgn0032048 FBtr0079700,FBtr0079699 1 2 3 110 2L 8493050 8493068 CGCTGGCTATAACGAACTG 58 8492794 8492978 CGTTTGGAATTCTCCAGATCG 59 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0302160 3 1 3 172 2L 8451891 8463635 AACTGTTCCTAGTTCCTCCC 58 8451738 8451758 GGCTATACTGATTAAGTGGCG 58 NA InUTR Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 3 2 2 85 2L 8199957 8199975 TAAATCGACTGGGCATCGA 58 8200022 8200110 TATAGTGGCCAGCATAAAGCT 59 NA Drosophila melanogaster 61 Cka FBgn0044323 FBtr0079537 2 1 4 88 2L 8030764 8030783 TACATTACGCGTGAATACCA 57 8030833 8032072 CCTACGCTATATCTTTGCGA 57 NA InUTR Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112720 3 1 5 128 2L 7975221 7975239 CTCAAGGAGATGCACAAGG 58 7958636 7958656 TGGCATAGATGAATGACTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG18591 FBgn0031962 FBtr0079560 1 1 1 60 2L 7885224 7885245 GTTATACGAGAACATATCGCTG 57 7885185 7885204 CATGTACTCATCGAATCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13795 FBgn0031937 FBtr0300709 2 1 1 88 2L 7725653 7725940 CATGGGCATTCTTGGAATACTG 59 7725586 7725604 ACTGACCCATGAAGGAGTG 59 NA Drosophila melanogaster 61 Slob FBgn0024290 FBtr0079517,FBtr0079519,FBtr0100158,FBtr0079518 1 4 4 80 2L 7649009 7649028 TTGAGGACTTAGTCCTTTGC 57 7648880 7648969 GCTTAATTGTACTGAAACAGGG 57 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 1 3 3 84 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227334 7228705 GTTTAATGGGAACCTGGCG 59 NA Drosophila melanogaster 61 SA FBgn0020616 FBtr0079349 2 1 1 80 2L 6950925 6950943 GGAGATAACCACGGACGAG 59 6950985 6951061 CATTGGTCAACAATGCTAGCA 59 NA Drosophila melanogaster 61 l(2)k09022 FBgn0086451 FBtr0079343 3 1 1 157 2L 6855399 6855530 CTCAGCAACTGATCAATTGC 57 6855650 6855668 ATACCAGGCTTGAAAGGTG 57 NA Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079380 2 1 2 128 2L 6800106 6800501 CCAACTTATCCATGTGGCT 57 6799996 6800015 GATAGATGCATCCGATCGAG 57 NA InUTR Drosophila melanogaster 61 CG13771 FBgn0031844 FBtr0079323 2 1 1 107 2L 6663203 6663223 GGAAACAGATGCTCTGTTGAG 59 6663052 6663134 AGATGGCAGATCCACACTG 59 NA Drosophila melanogaster 61 epsilonCOP FBgn0027496 FBtr0079261 1 1 1 60 2L 6489199 6489217 ACAGCAGAATGAGGAGGAC 59 6489241 6489259 GATGTAGTACTCGTTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9107 FBgn0031764 FBtr0079226,FBtr0079225 1 2 2 88 2L 6024380 6024453 GGAGGGCTATGTAGTGGTG 59 6024310 6024328 TCAGACGGATGAAGTGCTC 59 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 2 4 4 98 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 CG14010 FBgn0031725 FBtr0079116 2 1 1 83 2L 5606156 5608798 AGAGGAGGTTATGAGCATCG 59 5606092 5606110 GCTATGCACAAGTAGGCTC 58 NA Drosophila melanogaster 61 CG3756 FBgn0031657 FBtr0078994 3 1 1 114 2L 4969124 4969142 GAGGAGTATCGGGTGAAGC 59 4969220 4969298 CGTCTTCGTCGTTTCTGAC 59 NA Drosophila melanogaster 61 CG2837 FBgn0031646 FBtr0077402,FBtr0077401,FBtr0113021,FBtr0077403 2 4 4 63 2L 4904916 4904940 CCTCCATCTTATCCATAGTTTACTC 58 4904818 4904895 AAACGGGAATCAGTTCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG15625 FBgn0031644 FBtr0077390 1 1 1 80 2L 4890297 4890319 CTTCGATATTCGAATGGGATGAC 60 4890356 4890438 GGAAAGTGTTCATGTACTGTGG 60 NA Drosophila melanogaster 61 dp FBgn0053196 FBtr0290006 2 1 1 80 2L 4525396 4525615 AGAGGCCCTCAAATATGTACC 59 4525336 4525355 CATGACAAGTGCTGAACAGG 59 NA Drosophila melanogaster 61 CG15438 FBgn0025684 FBtr0077456 1 1 1 88 2L 4447841 4447913 CCAGTCAGAATTTGTGCCC 59 4447771 4447791 AATCCCAGTCAGAAGAGTACC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0077511,FBtr0290078,FBtr0077513,FBtr0290080,FBtr0290077,FBtr0290081,FBtr0077512,FBtr0290079,FBtr0290082 3 9 9 81 2L 3874500 3874519 TCCAAGACGACAATCTCACC 59 3874384 3874457 TCTTGCGCATGGTATTTGTG 59 NA Drosophila melanogaster 61 CG16704 FBgn0031558 FBtr0077550 2 1 1 121 2L 3692498 3692516 CTCATCTGCTGTCTTGTGG 58 3692280 3692298 GTATCTGGGCGATAGGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42463 FBgn0259953 FBtr0302203 1 1 1 81 2L 3668983 3669061 AAAGGAACCCATATGCAGG 57 3668920 3668941 TCGAACTTCATAGGTATACCCT 58 NA Drosophila melanogaster 61 Mad FBgn0011648 FBtr0077616 2 1 1 98 2L 3148118 3148136 ATCCTTCCAACAACTCGGA 58 3147817 3148056 CACCCTTGCCTATATGACG 57 NA Drosophila melanogaster 61 CG18558 FBgn0031469 FBtr0273251 3 1 1 117 2L 2843695 2843766 CATAATCATAGCTGGGAGAGCT 59 2843599 2843617 TTAGGTGGCCATAAGGACG 59 NA Drosophila melanogaster 61 CG2964 FBgn0031462 FBtr0077722 1 1 1 124 2L 2814062 2814080 AATGTCCGTGTGGTCTACG 59 2814168 2814249 TTCTTATCAGCAGGCTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077788 2 1 2 90 2L 2416370 2416444 TTGTGCAAGTCGTATCCAG 57 2416298 2416318 CAACTCCATGTTCATCTTGTG 57 NA Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077788 1 1 2 89 2L 2416370 2416444 TTGTGCAAGTCGTATCCAG 57 2416299 2416319 AACTCCATGTTCATCTTGTGG 58 NA Drosophila melanogaster 61 CG17712 FBgn0027597 FBtr0077903 1 1 1 60 2L 1751858 1751878 TTCCATACGAACGTAATCGAC 58 1751818 1751836 CGATGAACACCAGATCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 a5 FBgn0011294 FBtr0077922 3 1 1 80 2L 1329255 1329279 CAGAAGGATAATGAAGGAAATGGAG 60 1329312 1329392 TCGTACTTGATCCTAAGTAACTCC 60 NA Drosophila melanogaster 61 Twdlalpha FBgn0052574 FBtr0074329 3 1 1 132 X 16637873 16637975 AAATTCAGGCCGAATACGAC 58 16638070 16638088 TAGTTAGAGCTGCCAGAGC 58 NA Drosophila melanogaster 61 MSBP FBgn0030703 FBtr0074166,FBtr0301598 3 2 2 80 X 15782410 15782428 TTAAGTGCCGTGGAAATGG 58 15782273 15782293 CAATAGCTTACCAACCAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0300066 2 1 2 104 X 8365767 8366470 CGCTATCAAATCGACTATGCC 59 8366535 8366554 CACATTGATGGCCTTTCCAG 59 NA Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071129 3 1 2 82 X 7837250 7839936 CCTATGAGGTGTCTACCGA 57 7837186 7837207 GGCTATATCCGCATATAGTGAG 57 NA Drosophila melanogaster 61 CG15891 FBgn0029860 FBtr0100319 1 1 1 81 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187708 6187726 CTTGCGCTTCAGGAAATCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Cec-Psi1 FBgn0000280 FBtr0085613 2 1 1 60 3R 26037277 26037295 CTGACCACTTATTGGCCAC 58 26037317 26037398 ATAGACCAACGTCTAATGTCC 57 NA DesignRelaxed Drosophila melanogaster 61 CycB3 FBgn0015625 FBtr0084728 2 1 1 60 3R 20696085 20696105 ATCCGAATGTGGAGAATATGC 58 20696045 20696063 TTAATTGGACTGTGGTCGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lmd FBgn0039039 FBtr0084364 3 1 1 91 3R 18849545 18849563 TGGCTGCCAGTATAAAGGT 58 18848192 18849493 CATACGGTTTCGTATCGTAGTG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301378,FBtr0083787,FBtr0301380,FBtr0301379,FBtr0100127 1 7 7 107 3R 15578394 15579482 GCTTCACTAGCAAATAATGCC 58 15579551 15579569 TCCAGATGGTCGTATTCGG 59 NA Drosophila melanogaster 61 fray FBgn0023083 FBtr0083638 2 1 5 81 3R 14410237 14410255 AACGACACTAGTCGCAGTC 59 14410300 14412010 TGTGCCACCTACGATTCTC 59 NA InUTR Drosophila melanogaster 61 GATAe FBgn0038391 FBtr0083218 2 1 1 103 3R 11844308 11844387 TAGTTCAGCCAGTACCCAC 58 11844452 11844472 GTTATTCGATGATCGCTCTGG 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083078,FBtr0083080 3 2 3 113 3R 11136006 11138125 TGTTTGAAACGCTAAGTGCT 58 11138201 11138219 CTTCTCAAGCTTCATCGCT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cad88C FBgn0038247 FBtr0082965 1 1 1 80 3R 10462559 10462635 GCTCATTTACTCAATCTCAACC 57 10462676 10462694 GATTTCACGATCGAAGGCA 58 NA Drosophila melanogaster 61 foxo FBgn0038197 FBtr0273374,FBtr0082885 3 2 5 99 3R 9894249 9895162 CGAATTTCAGCTTCTTCCTCC 59 9895223 9895241 ATGATGAAGACACGAGCCA 59 NA Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 1 2 2 80 3R 4865747 4865766 GACAGCCAGATTATCTTCGG 58 4865804 4865902 CTTCTTACCGGATCCATATTTGAG 59 NA Drosophila melanogaster 61 Pep FBgn0004401 FBtr0075199 2 1 3 81 3L 17637128 17637148 AACCCTACATTACACATCCCA 58 17636815 17637085 TTGACCTTTACGCTGACCA 59 NA InUTR Drosophila melanogaster 61 RpS16 FBgn0034743 FBtr0071855 1 1 1 183 2R 18494088 18494106 GATTGAACCCAAGGTCCTG 58 18494545 18495270 CTCATCGACGTATTTCTGGT 57 NA Drosophila melanogaster 61 Jheh1 FBgn0010053 FBtr0086625 3 1 1 110 2R 14742285 14742362 GTTATCCGGATAAGACCATTGC 59 14742196 14742220 GGTAATTCGTATTGAATCCGTACTC 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 CG30069 FBgn0050069 FBtr0087530 1 1 1 80 2R 10075234 10075371 GAACGACTCAAGAACACGTG 59 10075411 10075432 CATGTGCAGATTTCACAAATGC 59 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 3 7 7 80 2L 21118119 21119756 AACATAGCTACCATCGGTGG 59 21119799 21119817 CATTAGACCCGGAGTCTCG 59 NA Drosophila melanogaster 61 bsf FBgn0032679 FBtr0081087 3 1 1 106 2L 18453464 18453482 AGGAGCCACTAGGATTCTG 58 18453310 18453394 ACTCCAAATCATTGGCCTG 58 NA Drosophila melanogaster 61 CG13090 FBgn0032054 FBtr0079683 2 1 1 61 2L 8517535 8517555 TGCTCTGTGTACAAGTAATCG 58 8517578 8517678 GGATTCCATCATTGTGCGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664,FBtr0079667 2 2 4 69 2L 8429454 8430290 AACAACAAGGTGGATCTCG 57 8430323 8430341 CCTGTGTTGTAACGTCTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12400 FBgn0031505 FBtr0077617 3 1 1 114 2L 3145381 3145403 GAGCTTATTTCGATCAGAAGAGG 59 3145234 3145307 CCATAGGTCTTGCGTTCCT 59 NA Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 1 2 2 80 2L 1152224 1152242 GTGGAGATCGTCAACTCCA 59 1152101 1152183 TAAAGCCAACTCGGTATAATCG 58 NA Drosophila melanogaster 61 CG13946 FBgn0040725 FBtr0078004 3 1 1 74 2L 776751 776770 GAATGGAACCGAACTCTCCA 59 776807 776825 TCAGTGGTGCTGGATTCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or49a FBgn0033727 FBtr0087918 3 1 1 60 2R 8282022 8282096 GAGTACAAATTTAGCCAAGGC 57 8282114 8282136 GTATCGCAAAGATCCTTCATACC 59 NA DesignNoJunction Drosophila melanogaster 61 Sir2 FBgn0024291 FBtr0080434 1 1 1 60 2L 13167166 13167185 CATCATGAAGCCGGATATCG 59 13167387 13167405 GACCGTGTGGTACTCATCC 60 NA DesignNoJunction Drosophila melanogaster 61 CG5953 FBgn0032587 FBtr0301144 3 1 3 68 2L 16511438 16519980 ATTCTTCAAACATGGGCCTG 58 16511389 16511407 TATTCCAACTGTCCAGCGT 59 NA DesignRelaxed Drosophila melanogaster 61 CG6902 FBgn0035899 FBtr0076657 1 1 1 65 3L 8487231 8487249 GAATAAGATGTCGCAGCGG 59 8484529 8484547 AACGAAGAAGTTCTTCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG16879 FBgn0028904 FBtr0080596 1 1 1 80 2L 14105299 14105319 ATCTACAATGTGCACATGGAG 58 14105360 14105478 TTCAGTGATAATGCGGTAGG 57 NA Drosophila melanogaster 61 CG7772 FBgn0030883 FBtr0074540 1 1 1 107 X 17800361 17800694 CATCAATCGGATCACCTGG 58 17800272 17800290 ATGATAAGCGGTATGCTGG 57 NA Drosophila melanogaster 61 bcn92 FBgn0013432 FBtr0070431 3 1 1 186 X 2043363 2043442 AACTTCAGAATGTACGCTGC 59 2042819 2042841 GGGTCTTCTTGTTCTCTATAACC 58 NA Drosophila melanogaster 61 CG31141 FBgn0051141 FBtr0084490 3 1 1 93 3R 19749234 19749255 TCGAGAACCTTATAATCTGCGA 59 19749309 19749386 GAAGTAGTATCCGGGCAGG 59 NA Drosophila melanogaster 61 CG14305 FBgn0038630 FBtr0083634,FBtr0083636 3 2 2 60 3R 14425301 14425319 TGGACGACCATATGATCCA 57 14425342 14425361 GATGAACAGAATGACTCCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Best1 FBgn0040238 FBtr0082183,FBtr0114590 2 2 2 105 3R 5988996 5989014 CTCCTGTCTAATGCAGCCA 59 5988021 5988927 CCATGCTCTCCACTGTCTC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0112817,FBtr0076772,FBtr0076773,FBtr0076774,FBtr0076771 3 5 5 81 3L 7895285 7895303 TTACAATTACGCGATGCGC 59 7895148 7895242 GAGATTGACCAGCTTTGTCAG 59 NA Drosophila melanogaster 61 Tim10 FBgn0027360 FBtr0071676,FBtr0071677 1 2 2 93 2R 17578191 17578209 TATAACCGCATGACGAACG 58 17577953 17577971 GATCGATGCACACCATCTC 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG2736 FBgn0035090 FBtr0072403 1 1 1 80 2R 20861438 20861458 ATCTCAGGAGGTTTAGCTCAC 59 20861321 20861398 GTCCCATTTCGAACTCATACC 58 NA Drosophila melanogaster 61 CG33494 FBgn0053494 FBtr0089607 3 1 1 116 3R 21320010 21320028 CTTATGGTCGACAGCAAGC 59 21319776 21319798 GGATTGTCTGAGTTTCTTATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18594 FBgn0038973 FBtr0084255 2 1 1 60 3R 18291827 18291848 CATTATTCCCGACATCATCGAC 59 18291868 18291887 GGAAGGATAGGTGATGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1192d FBgn0082998 FBtr0113563 2 1 1 78 X 17038031 17038052 GGACCAGATTAATTTCCATCCT 58 17037974 17037994 CCTTTACGTTTCTCATGTGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 2 5 5 101 X 21868783 21868863 AGATACTCCACGAATTTGCCA 59 21868926 21868944 GATGTTTGGTCGAGAACGC 59 NA Drosophila melanogaster 61 CG12231 FBgn0031026 FBtr0074779 2 1 1 60 X 19425593 19425611 ACAGGGAGATCAGTACCGA 59 19425551 19425571 TCGTAGATGTTCAGCATTACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14196 FBgn0031002 FBtr0074691 2 1 1 80 X 19131984 19132003 CCGGGAGTCTCATACTAACC 59 19131765 19131941 TGCCAAAGCCAAACAACAG 59 NA Nonspecific Drosophila melanogaster 61 CG6461 FBgn0030932 FBtr0074622 3 1 1 80 X 18400495 18400514 GAAGGCAATGTACGTTTGCT 59 18400372 18400454 GTACTTCATGATCACAGCTGC 59 NA Drosophila melanogaster 61 CG32548 FBgn0052548 FBtr0074568 2 1 2 72 X 18330828 18334234 CAGGAGCAGTTGCAAACTC 59 18330774 18330792 AGTACACGGCAGGATACTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10598 FBgn0003057 FBtr0074400 3 1 1 63 X 17120076 17120094 TACTCTGGCGGATATGCTG 59 17120031 17120052 CGTTAATGACCTTCACGATGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sap30 FBgn0030788 FBtr0074331 1 1 1 60 X 16682327 16682345 CTTCAAGGTCCAAACGAGG 58 16682366 16682611 TTTCATAATTGTATCCGCCAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG9902 FBgn0030757 FBtr0074296 3 1 1 81 X 16439094 16439114 GCATGATAAAGCAGAGAAAGC 58 16438946 16439053 GTCTTCCGAAACTTCATACCA 58 NA Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 1 2 2 109 X 16110288 16110306 ACTCGCTGCTAAATTAGCA 57 16107291 16107310 CGGATTCATTATGTGCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8958 FBgn0030725 FBtr0074207 1 1 1 80 X 15978041 15978115 ATCTAGCCCTGTCTAGTTGTG 59 15978154 15978175 GTTTCAACATATGTGGCTTCAG 58 NA Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0073513 1 1 2 84 X 11471835 11471914 GATCCGAATTACTTTAGGTGCA 58 11471959 11471977 GATGGAAGCGTAGCATGTG 59 NA Drosophila melanogaster 61 Gip FBgn0011770 FBtr0071472 1 1 1 60 X 10223465 10223484 GATTCATCTAACCGCTGGAC 58 10223424 10223445 ATACGTCTTCGTGTAGTCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 3 2 2 74 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002260 7002279 CTGATTGCCTACGAAACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 inx2 FBgn0027108 FBtr0071006 1 1 3 114 X 6892769 6893001 CCACCTGGAAACTGAAGAG 57 6893079 6893097 ACTCCTTGACACTAACGCT 58 NA InUTR Drosophila melanogaster 61 CG12219 FBgn0043796 FBtr0070925 3 1 1 96 X 6194997 6195081 ACTTGTACCTCTGCCTCTC 58 6194919 6194937 AGCTTCCAGAAGTTGTGGA 58 NA Drosophila melanogaster 61 CG12729 FBgn0029816 FBtr0070819 2 1 1 60 X 5739518 5739536 TTGCTTCTCCACTCGATCC 59 5739558 5739578 TGACAGCTATCAAGAGATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465,FBtr0300466 2 2 3 81 X 5523482 5523500 TCCTTCTCATCTGCAACGT 59 5523047 5523437 TCCAGCTGAACAGGATTGG 59 NA Drosophila melanogaster 61 rap FBgn0003200 FBtr0070687,FBtr0070686 3 2 2 103 X 4570358 4570377 TGAAGCACTACAGTCCTGTG 59 4568640 4570292 GTTGTTGTACGCTCTGCAG 59 NA Drosophila melanogaster 61 CG11444 FBgn0029715 FBtr0070698 1 1 1 60 X 4447982 4448000 TTCGTCAACCACAAAGGTC 58 4447940 4447958 ATTCCTGTTGCAGTTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14050 FBgn0040392 FBtr0070407 1 1 1 94 X 2219333 2219436 TTTCATTACCGAGGACGAC 57 2219257 2219277 TGTTCTTGTTATCTACGTCCC 57 NA Drosophila melanogaster 61 CG3587 FBgn0023521 FBtr0070321 3 1 1 144 X 1835080 1835166 TACTTATAATGCACCGCTGG 57 1835273 1835291 CTTCACGGGATTTCTGCTC 58 NA Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070318,FBtr0070320 2 2 3 170 X 1823043 1823061 CCATTCGATGAAGCTGACG 59 1823195 1823286 CTTCAGCTCGAAATCGCTG 59 NA Drosophila melanogaster 61 CG14815 FBgn0023516 FBtr0070368,FBtr0070367 1 2 2 60 X 1761162 1761181 ACCTTTAGAGGACAGAACCA 58 1761121 1761139 AAATGACCATCTTCAGCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11412 FBgn0024362 FBtr0070208,FBtr0070209,FBtr0070210 2 3 3 105 X 1237551 1237812 GTCACCAAGGCCATAGAGG 59 1237881 1237899 AGCCCAAGTTCTCGTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 elav FBgn0260400 FBtr0070091 3 1 3 186 X 415569 415590 GAGATTGCAAAGAGAACTTAGC 57 413207 413225 CACTCTGCATTAGCTGTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Su(Ste):CR42438 FBgn0259869 FBtr0300166 2 1 1 180 U 9441244 9441262 GAGTGAACGGCAACATGTC 59 9441404 9441424 GTGTCCTGAAAGTAGTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340,FBtr0089793,FBtr0301341 1 3 3 80 4 757663 758372 AGAAACTAAGGAGGAGAAGCA 58 758413 758432 CGAATCACTTCGATCTTGGG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-2442a FBgn0082989 FBtr0113582 3 1 1 66 3R 1424439 1424460 GTAATCGGTGTCAAGAATATGC 57 1424394 1424415 GTGTTTAGGACAAACCAAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pygo FBgn0043900 FBtr0085806 3 1 1 104 3R 27402723 27403033 TTTCACAGAACCTGTGTTGG 58 27402638 27402657 AATATGCTTGGAAGACACGC 59 NA Drosophila melanogaster 61 CG15530 FBgn0039752 FBtr0085568,FBtr0085569 2 2 2 83 3R 26004019 26004037 AAGATGTTCCGAAACGTGC 59 26004084 26004168 GATCTGGTACTCTCCAGGC 59 NA Drosophila melanogaster 61 RpS8 FBgn0039713 FBtr0085489 3 1 1 90 3R 25688838 25688856 TGAAGAAGTACCTGGAGCG 59 25688910 25689146 GAAATGCAAGCCAAGATGC 58 NA Nonspecific Drosophila melanogaster 61 CG7824 FBgn0039711 FBtr0089926 2 1 2 79 3R 25684547 25684567 GGACTCTTTCTGCAATAACGA 58 25684364 25684507 ATTAGCGTCCATTGTCATCG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299752,FBtr0299745,FBtr0299750,FBtr0299748,FBtr0299747,FBtr0299753,FBtr0299742,FBtr0301396,FBtr0299749,FBtr0299743,FBtr0299746,FBtr0299751,FBtr0299744 1 13 13 80 3R 24745224 24745243 CCGTCATTCAAGATGATGCT 58 24745283 24745961 TGGCCATGATCTTATATCTGTG 57 NA Drosophila melanogaster 61 mfrn FBgn0039561 FBtr0085266 3 1 1 80 3R 23770725 23770806 CAACTACGTGATTTCGGGAG 58 23770664 23770684 ATACGCTGTTTGATCACATCC 58 NA Drosophila melanogaster 61 pll FBgn0010441 FBtr0085179 2 1 1 92 3R 23077700 23077718 CGTTTACGAGCGCATAAGG 59 23077563 23077644 GTAGATGCCTCTAGCCGTG 59 NA Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 3 2 2 81 3R 22984666 22984742 AACGATCTTTATGAGATCCGG 57 22984785 22984803 ATTTCTTCTTGCGTCCCTG 58 NA Drosophila melanogaster 61 Gr97a FBgn0041224 FBtr0085081 2 1 1 86 3R 22791095 22791170 GTAACCAAACCCTCACCAG 58 22791027 22791045 TCACCACTTGCTTGAAACG 59 NA Drosophila melanogaster 61 CG6330 FBgn0039464 FBtr0085084,FBtr0085085 3 2 2 98 3R 22777567 22777585 ACATTGAGCTCATGGACCA 59 22777132 22777506 TGCAAACGAACTTAACGTCG 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139,FBtr0290138,FBtr0290141,FBtr0290140,FBtr0290137 3 5 5 189 3R 21733741 21733760 TATCGGCTTCTATTTCGGCT 59 21733912 21735764 GATTCCAGACACGAAGCTG 58 NA Drosophila melanogaster 61 CG5079 FBgn0039346 FBtr0084883 3 1 1 61 3R 21439892 21439910 AAGTGCAACCGAATAGGGA 59 21439935 21439953 TGCTGTCTGAAGTTTGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11089 FBgn0039241 FBtr0084710 2 1 1 88 3R 20706391 20706412 GGAGATCTCTAATGCAATCGAC 58 20706460 20706538 CCTTATCGAACATTCCCTCG 58 NA Drosophila melanogaster 61 CG6182 FBgn0039158 FBtr0084551 2 1 1 82 3R 19988339 19988358 TAAGGACATAAGGTCCTCGA 57 19988403 19988477 CGTCAAGATCCTTTACCGT 57 NA Drosophila melanogaster 61 Plip FBgn0039111 FBtr0084454,FBtr0084453 1 2 2 109 3R 19584917 19584935 TAAGTTCCTCCTACCAGCC 58 19585007 19585088 TCCGTTCTTCATCATGAGGT 58 NA Drosophila melanogaster 61 CG5388 FBgn0038944 FBtr0084241 3 1 1 124 3R 18165960 18165980 CTTCCAAATCTGAAGTTCGCA 59 18163322 18163340 CTCACTTCAACAGGAGGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6656 FBgn0038912 FBtr0300077,FBtr0084139 1 2 2 80 3R 17703105 17703192 GGAGACTTTGAAGTGAAGTTGG 59 17703233 17703251 ATCGCAATTGGGAATGGTC 58 NA Drosophila melanogaster 61 CG5630 FBgn0038842 FBtr0083979,FBtr0113257 1 2 2 80 3R 16751814 16751897 ACAATGTGGAGATCCATAAGGT 59 16751934 16751956 AGTCCTCCTTGTACATGATAACC 59 NA Drosophila melanogaster 61 Oamb FBgn0024944 FBtr0083932,FBtr0083933,FBtr0083934 3 3 3 113 3R 16526402 16526420 AAGTTGAGGAGTGTGACGA 58 16526045 16526328 TATCCAAACCTTGAAGACTTCC 58 NA Drosophila melanogaster 61 CG4686 FBgn0038739 FBtr0083816 1 1 1 144 3R 15690887 15690905 GTACGTCCTGAAGGACGTC 59 15691012 15692147 CAAAGTGCCAGTGAATACGG 59 NA Drosophila melanogaster 61 Rim FBgn0053547 FBtr0301555 3 1 1 80 3R 13715497 13716197 GACACCTCCTATCTCTTACGT 58 13715437 13715456 CGGCGGTGATAAATGATCTG 59 NA Drosophila melanogaster 61 CG7379 FBgn0038546 FBtr0083529 3 1 1 102 3R 13623599 13623698 AGTACAGAGGCCTCATTCG 58 13623515 13623533 ATCCTGGAGATGCTTCGAG 59 NA Drosophila melanogaster 61 CG17562 FBgn0038449 FBtr0083329 2 1 1 82 3R 12441252 12441273 ATGTGCTAATTAGACCAAAGCG 59 12441316 12441390 CAGCAGTTCAAATACCGCA 58 NA Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083185,FBtr0083186 2 2 2 61 3R 11686258 11686276 GAAGCTCAAGAGAAGGCAG 58 11686301 11686319 TATCGGTCGGTTCTGATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Caf1 FBgn0015610 FBtr0083052,FBtr0301845 1 2 2 124 3R 11052135 11052153 ACTACACGAAGCATCCCAG 59 11052240 11052369 CAGCAAATAGCCATTGAGGT 58 NA Drosophila melanogaster 61 CG14358 FBgn0038199 FBtr0113232 1 1 1 80 3R 9918999 9919018 AATACGGACATTCGTGTTGG 58 9918750 9918867 GCAAGGGATGCTGTTTAGC 59 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114374,FBtr0114375 2 4 4 87 3R 9258844 9258865 CTGAAACAAGATCTTCTCGAGG 58 9258647 9258796 CCAGTTCAGACTGCAATGC 59 NA Drosophila melanogaster 61 CG6225 FBgn0038072 FBtr0082649,FBtr0113225 2 2 2 80 3R 8484658 8484735 CTGTGATTAAGTCATACGCCG 59 8484773 8484795 CAATGCCCAGACTAATCTTTGAG 59 NA Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 1 2 2 107 3R 7574585 7574603 CTTGGAGAACGACCAGGAG 59 7574441 7574514 ATCGCATACTGGGAATGGT 58 NA Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 3 1 1 76 3R 5380878 5380896 ACTGCTGTCCAAGAAACTG 58 5380759 5380780 GGCACTCATAGAGACAATTCTC 58 NA DesignNoJunction Drosophila melanogaster 61 PQBP-1 FBgn0250829 FBtr0301971 2 1 1 80 3R 4214519 4215714 CATCGGATAAAGACAGCGAG 58 4214458 4214479 TGTAAATCGAATCACCTTGAGG 58 NA Drosophila melanogaster 61 CG3223 FBgn0037538 FBtr0081785 2 1 1 94 3R 3835343 3835434 GCGAGTTGGAGATCATCCA 59 3835492 3835510 CTGAAAGCAGTGGATCACG 58 NA Drosophila melanogaster 61 wtrw FBgn0260005 FBtr0081754,FBtr0081755,FBtr0081753 2 3 3 105 3R 3720342 3723577 GCAAATAACCGCTTCAAATCG 59 3723644 3723662 ATTCGAATTCTCCAGCGGT 59 NA Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 3 2 2 81 3R 2909299 2909421 TGCATGCTAGGTATTCAGCA 59 2909237 2909255 GGATCCTGTACCACCATCG 59 NA Drosophila melanogaster 61 zen2 FBgn0004054 FBtr0290296,FBtr0081671 2 2 2 60 3R 2569596 2569617 GGTCTTCGGAGAAATCAAAGAG 59 2569557 2569577 AGTTCGATTAGCTGAAGACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0100159 3 1 2 112 3R 733740 733758 GAAGACTCTGGATGTGGTC 57 733833 733914 TCAAATTGTGATTGGTCACG 57 NA Drosophila melanogaster 61 CG7470 FBgn0037146 FBtr0078477 1 1 1 80 3L 21969815 21969894 TAGCAAAGAGTTTGACGGC 58 21969938 21969956 TCGTAGAGGGACATCAGAC 57 NA Drosophila melanogaster 61 capaR FBgn0037100 FBtr0078379 3 1 1 80 3L 21552986 21553084 GTTCATTCTGTTCACGTCAG 57 21552925 21552944 TATCAGCACCCTATTTGCAG 57 NA Drosophila melanogaster 61 CG6933 FBgn0036952 FBtr0074854 3 1 3 113 3L 20213236 20213255 GGTCGTCTGTCTATCAAGTG 57 20212745 20213163 CAGATCCTCATATTGATTGCTG 57 NA InUTR Drosophila melanogaster 61 CG14182 FBgn0036922 FBtr0074913 1 1 1 60 3L 19972765 19972783 ACTGGATCATCACGGAGTC 58 19972655 19972673 ATGCAGGTCCACATCAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 3 4 4 102 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667495 18667513 GATATGGAGTTCGCCTTCC 57 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075097,FBtr0075094,FBtr0075095,FBtr0075096 2 4 4 102 3L 18667579 18667659 GAAGCATGACATCCGACAG 58 18667495 18667514 GATATGGAGTTCGCCTTCCT 59 NA Drosophila melanogaster 61 CG13056 FBgn0040794 FBtr0075376 3 1 1 177 3L 16326441 16326533 CAGAGAATGTACTTATCCTTTGCTC 59 16326667 16326686 GATGAACGATGGTGGAACTC 58 NA Drosophila melanogaster 61 CG33796 FBgn0053796 FBtr0091800 3 1 1 108 3L 16162848 16162867 ATGTCGATTTCTGCGAAAGC 59 16162699 16162777 GATCATGTCACCTTGCAGC 59 NA Drosophila melanogaster 61 CG33796 FBgn0053796 FBtr0091800 2 1 1 108 3L 16162848 16162866 TGTCGATTTCTGCGAAAGC 59 16162698 16162776 CGATCATGTCACCTTGCAG 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0112850,FBtr0075441 3 2 7 104 3L 16068850 16069333 GTCGGAGTTCTTATGGCAG 58 16069400 16069419 CATATCGATCGCTTGTGGAG 58 NA Drosophila melanogaster 61 CG7906 FBgn0036417 FBtr0075741 1 1 1 106 3L 14230991 14231009 GTCCCAAAGCATCACTGTC 58 14231078 14231159 AACATTCTTGGTGTTGAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Pcaf FBgn0020388 FBtr0075969 2 1 1 80 3L 12515089 12515109 AGGAGTACGATAGTGCTACTC 58 12514967 12515050 TGCGAATTACAGCTATGAACTG 59 NA Drosophila melanogaster 61 Lsp2 FBgn0002565 FBtr0089324 1 1 1 60 3L 12123698 12123716 TTCATGCACTACGACACCT 59 12123738 12123758 CAATGGTCTTGTATACCTCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12289 FBgn0036160 FBtr0076178 2 1 1 60 3L 11450411 11450429 CCCGTTAGAATGAGGTGTG 58 11450369 11450387 ACTGATCGCCGTTATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 2 2 2 81 3L 11075550 11075633 GACTTCAGAATATACCTTGTCGG 58 11075491 11075509 AAATGGCATGTGCCATAGG 58 NA Drosophila melanogaster 61 NijA FBgn0036101 FBtr0089569,FBtr0089570,FBtr0089571 3 3 3 185 3L 10687816 10688134 TTATATTCCAGATTGCTGTGGG 58 10687652 10687672 GTAAAGCAGGCACAGTATCTC 58 NA Drosophila melanogaster 61 nbs FBgn0261530 FBtr0300189 3 1 1 76 3L 9715362 9715382 CATACAGTATGTGCCATCGTC 59 9715234 9715253 TACGTCGACCATTCTGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6761 FBgn0036031 FBtr0076414 2 1 1 81 3L 9694541 9694560 CCTAACGCCACAAAGATGTC 59 9694426 9694497 ACGATGGTTGGTCACTCTC 59 NA Drosophila melanogaster 61 CG3088 FBgn0036015 FBtr0076421 1 1 1 60 3L 9594196 9594214 GATCCTTACATCCGCTCAG 57 9594154 9594172 GGCTCCAAAGTAGATGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3437 FBgn0035998 FBtr0301032 3 1 1 80 3L 9449768 9449873 ATAAGGAGGAGTTTGTTGCAG 58 9449708 9449726 ACGCAACAAGTAAGGAACC 58 NA Drosophila melanogaster 61 CG5194 FBgn0035955 FBtr0076548 2 1 1 90 3L 9002149 9002169 ACCAGGATTCTGACAAGAAGG 59 9002029 9002047 ACATACACCACCTTCTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 3 5 13 84 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627739 8627757 CAAGTAGGACTCTGTCGTG 57 NA Drosophila melanogaster 61 CG13678 FBgn0035859 FBtr0076700 2 1 1 64 3L 8215942 8215962 ATCCATGGATTGTAAACCCTG 58 8215988 8216006 TAAATGCCAGTCCATGAGC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 RecQ4 FBgn0040290 FBtr0076729 1 1 1 80 3L 8164266 8164284 AGCAGCTAAAGGCTATCGT 58 8164143 8164225 CGTTACTTGGCTCTATTTCCAG 59 NA Drosophila melanogaster 61 mRpL36 FBgn0042112 FBtr0076735 2 1 1 77 3L 8118113 8118133 CCTGGCTAGTAGAATACTGCA 59 8118056 8118074 GTGAGAAGGTGGAAACCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14834 FBgn0035768 FBtr0076880 1 1 1 60 3L 7339205 7339226 AAGATACGGTCAGTCATCTGTC 59 7339166 7339187 ATATTCAGGCTAAAGACATCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8219 FBgn0035693 FBtr0077003 1 1 1 88 3L 6195697 6195715 CTCATAGAGCCACTGGTGG 59 6195767 6195839 GATGATTGGCGAACTTCGG 59 NA Drosophila melanogaster 61 CG10576 FBgn0035630 FBtr0077121,FBtr0077122 3 2 2 118 3L 5755805 5756155 GAAGCCATCCGAGATTGTG 58 5755705 5755723 CAACACTGTACTCGCTCAC 58 NA Drosophila melanogaster 61 CG5146 FBgn0035617 FBtr0077085 2 1 1 115 3L 5577795 5577867 CGGATGTGATTTGGACAGC 59 5577946 5577964 GTGGTCAGTAGTTTCCGCT 59 NA Drosophila melanogaster 61 Lkr FBgn0035610 FBtr0077149 3 1 1 81 3L 5508763 5508852 ATTTCGCGAGAACAATGAGAC 59 5508702 5508722 GGATTGCAATTGATCATCGGA 59 NA Drosophila melanogaster 61 CG4769 FBgn0035600 FBtr0077144 1 1 1 80 3L 5355023 5355041 GGTCAGTACTTCAACCCGT 59 5355085 5355217 CTCGTACTCGATGACCTCG 59 NA Drosophila melanogaster 61 CG10672 FBgn0035588 FBtr0077179 3 1 1 121 3L 5134026 5134045 GAAGAGTTCCTATCTGCTGG 57 5133862 5133942 AATAGGCTCCCAGTAGCTC 58 NA Drosophila melanogaster 61 CG13716 FBgn0035563 FBtr0073319 1 1 1 60 3L 4634520 4634543 GAGACGCTATTCAAGAAGAATCTG 59 4634483 4634501 GATGTATGTGCATGCGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr64b FBgn0045478 FBtr0073195 1 1 1 80 3L 4029937 4030008 TTGGTCCATAGAGGTTCAGC 60 4030051 4030069 AGGTAGAAGAATCCGCTGC 60 NA Drosophila melanogaster 61 Drs-l FBgn0052274 FBtr0073081 3 1 1 61 3L 3335758 3335778 AGTTCCTAATTGTCCTGTCCG 59 3335717 3335735 ATGTGATTCTTCCGCTCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036,FBtr0073035 3 2 2 107 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183797 3183948 GTTATCCAGCAAATCCCGC 59 NA Drosophila melanogaster 61 CG12035 FBgn0035263 FBtr0072766 3 1 1 60 3L 1725316 1725337 TAACGACACCTTTCTCTTTCTC 58 1725358 1725376 GCTGAGAAGGAATAGCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34268 FBgn0085297 FBtr0112463 3 1 1 145 3L 501025 501106 ATGTTCCGCATTATCGCTG 58 501215 501233 ACTGGAACATGCTTCACCA 59 NA InUTR Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072525,FBtr0072524 3 2 2 82 3L 220439 220522 GTGTACACGTTCATAGAACACG 59 220378 220401 CGCCTTACTATAAATGATAGTGCC 59 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0100224 2 4 6 107 3L 217439 217505 TTTGTTTCAGGTCTTGCCC 58 217576 217594 TATCGTAGGTTCAGTGGGT 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR30068 FBgn0047303 FBtr0087541 2 1 1 172 2R 10164024 10164796 ATTACCAGAACGACTGGCA 59 10164929 10164950 GGCGTTGATTAAATAATGCTGC 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 2 6 6 88 2R 20064276 20064296 CGGTTATGTCGACTACAATGC 59 20064346 20064425 TTAACTTGCGTTTGCTGGG 59 NA Drosophila melanogaster 61 CG34213 FBgn0085242 FBtr0112406 3 1 1 82 2R 19854980 19855052 GGAATTCAGATGAGGGAACC 58 19854917 19854937 GAACTGGAAACTAAATCCAGC 57 NA Drosophila melanogaster 61 Or59b FBgn0034865 FBtr0072021 1 1 1 112 2R 19358396 19358475 GACTATACTGAAATGCTGTGAC 57 19358305 19358323 AGAAGAACACGTTCACCAG 57 NA Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071961 2 1 4 91 2R 18957161 18957179 GAAGATCTATCATCGGGCG 57 18958174 18958196 GGGTCATGTTCTTGGTAATATCC 59 NA DesignNoJunction Drosophila melanogaster 61 stl FBgn0086408 FBtr0113110,FBtr0071885 2 2 2 80 2R 18703126 18703201 CCATCACATTCAGATATCTCCG 58 18703241 18703260 TTTGCTACTCAGTTCGTCTG 58 NA Drosophila melanogaster 61 T3dh FBgn0017482 FBtr0071848 2 1 1 101 2R 18219131 18219364 TACGCCTTCGAGATGTCAG 59 18219048 18219066 CAAACAAACCTTCCGAGCT 58 NA Drosophila melanogaster 61 CG3292 FBgn0034710 FBtr0071783 1 1 1 80 2R 18093032 18093053 GAAGACTTTCGTAGCCATTAGC 59 18092915 18092991 ATCTCGGGCATGTCTATGG 59 NA Drosophila melanogaster 61 CG13871 FBgn0034502 FBtr0086282 1 1 1 60 2R 16205283 16205301 ATGATCCCTTCGAGTCCCT 59 16205322 16205343 GACTTACGCTCATTCAAATGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343 1 1 2 177 2R 15671386 15671469 GCAGCAAGCCAACATAGAC 59 15671227 15671245 CATGAAACCGCTCTTGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10927 FBgn0034360 FBtr0086705 2 1 1 60 2R 14501327 14501347 CACCGAAGATTTCAAGAAGGA 58 14501366 14501387 GTAATCGTAGTAGGCTTTAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fj FBgn0000658 FBtr0086754 2 1 1 60 2R 14122487 14122507 GAATACGGATCAGATTCAGGG 58 14122529 14122547 TATGTTTAAGAGCTGGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9642 FBgn0034183 FBtr0086973 1 1 1 130 2R 12934484 12934502 TCTGTAATGTTCGGGCTGG 59 12934596 12934671 TAACAGACGGCACTTTCGA 59 NA Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114472,FBtr0114473 1 2 3 129 2R 12086334 12086352 CTACAGCTCTTGGGACTGG 59 12086443 12086523 CTTCATTAATCCCGCTTCCAC 59 NA Drosophila melanogaster 61 lbk FBgn0034083 FBtr0302084 3 1 1 81 2R 12053592 12053611 GGAGCTGAGTAATAATCGCC 58 12053653 12053737 GTTGAGAGCTAGCTTCTTCAG 58 NA Drosophila melanogaster 61 CG8397 FBgn0034066 FBtr0087261 3 1 1 115 2R 11903960 11904043 GAGAGCAGTGGAAGATCAC 57 11903863 11903881 CTTCTTTGTCTCGGGATCG 58 NA Drosophila melanogaster 61 RpS23 FBgn0033912 FBtr0087575 2 1 1 99 2R 10103604 10104042 AATTATGGGCAAGCCAAGAG 58 10103524 10103545 CAAATGAGCCTTCTTGTAGTCC 59 NA InUTR Drosophila melanogaster 61 CG4716 FBgn0033820 FBtr0087746 3 1 2 131 2R 9144419 9144437 GACAAGGCCAAGAACAAGG 59 9144532 9144630 AAGCATCGTATCCTCCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8839 FBgn0033717 FBtr0087958 2 1 4 165 2R 8229273 8231976 CTCTGTGTAGCAATAACACATGG 59 8229130 8229149 AAATGTAACCACCAATGGCC 59 NA InUTR Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113067,FBtr0113068,FBtr0088088,FBtr0113069 2 4 4 80 2R 7531791 7531810 CATTAATTTGCACTCGTGCT 57 7531671 7531750 ATCTCCATGAGATTTGGACAG 57 NA Drosophila melanogaster 61 dare FBgn0015582 FBtr0088176 3 1 1 80 2R 7179488 7179563 GGATGCTTTGAAGACTACGG 58 7179427 7179445 ACCAAATGGACTCGTTCCA 59 NA Drosophila melanogaster 61 CG12909 FBgn0033507 FBtr0088348 1 1 1 60 2R 6197982 6198002 GAGTTGGATGGACATCATTCG 59 6198021 6198042 GGCTGGAGTTAAATTGTACTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088407,FBtr0088408,FBtr0088409 2 3 3 106 2R 5982044 5982062 TACCATCGAACCGGAATCC 59 5982132 5982211 GTCTCGAGTCTTCTGCCAG 59 NA Drosophila melanogaster 61 CG1516 FBgn0027580 FBtr0088457,FBtr0088460,FBtr0088459,FBtr0088454,FBtr0088458,FBtr0088455,FBtr0088456,FBtr0300850,FBtr0088462,FBtr0088461 2 10 10 135 2R 5743520 5743601 CTACTCCAGCAAGGTGGAG 59 5743403 5743423 CTTATCCTGCTCCGAGTAGAC 59 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658,FBtr0088659,FBtr0300599 1 3 3 80 2R 4847070 4847093 CGGAAATCTATCAGACTGTTATGC 59 4847129 4847206 AAGTTCCATTGTCCTTGTTGTC 59 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 1 2 2 102 2R 4279155 4279173 AACTGAGTCCATCGTCCAG 59 4279239 4281077 TTGATGGTGGGTTCATTCG 58 NA Drosophila melanogaster 61 CG12836 FBgn0033140 FBtr0089037 3 1 1 164 2R 2956250 2956764 GATGTTCGCAGATAACCGC 59 2956892 2956910 ACTTCCAGTCGTTCTTGGG 59 NA Drosophila melanogaster 61 Tsp42Eh FBgn0033129 FBtr0089027,FBtr0089026,FBtr0089025 3 3 3 82 2R 2921961 2922139 TTATCTTTGAGTTCGCTGGC 58 2922183 2922202 ATAGAATCTTATGCGGTCGC 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 2 3 3 162 2R 1969442 1969460 TCTAAGCGTCCAGAATCGG 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 2 5 5 80 2R 19472 19550 GTAATCACTTCAGTTGAGGTGG 59 19586 19609 GTCTAAATCAAGGAGATCGTACTG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-525b FBgn0083037 FBtr0113541 1 1 1 63 2L 20418735 20418753 ACTAGAAAGACGAACGGCA 59 20418779 20418798 ACACGAACACAAGTCATCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR9337 FBgn0032898 FBtr0081448 3 1 1 83 2L 20863078 20863220 GGAAATCCTGACGAAGTCG 58 20863013 20863034 CCTAGGTATGTAGATGACTGGG 59 NA Drosophila melanogaster 61 CG2201 FBgn0032955 FBtr0100510,FBtr0085921,FBtr0085922,FBtr0100511,FBtr0085923 2 5 5 80 2L 21617539 21617560 CGATAGTAATAGTCGCGAATGC 59 21617419 21617498 ATTCGCAGAAGGACCTCAC 59 NA Drosophila melanogaster 61 His3:CG33821 FBgn0053821 FBtr0091825 1 1 1 60 2L 21464788 21464807 CGCTCAAGACTTTAAGACGG 59 21464830 21464848 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33902 FBgn0053902 FBtr0091906 1 1 1 60 2L 21452691 21452710 AGAAGAACATCACCAAGACC 57 21452650 21452668 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 sNPF FBgn0032840 FBtr0081327,FBtr0081326 2 2 2 104 2L 20054723 20054886 CGGACAATGAACAAATTGAACG 59 20054951 20054969 CCGGAATTTCGTACTGCTG 59 NA Drosophila melanogaster 61 CG10343 FBgn0032703 FBtr0081098 2 1 1 81 2L 18703592 18703611 GCGTTGCAGTCAATATACGA 59 18703652 18703740 CCTCTTCGCCATATTTGTACTG 59 NA Drosophila melanogaster 61 msl-1 FBgn0005617 FBtr0081130 2 1 1 81 2L 18687240 18687259 GGATGATTATCCGTGGATGC 58 18687118 18687199 AAGGTAATTCTGATTCTGCCAG 58 NA Drosophila melanogaster 61 CG15160 FBgn0032688 FBtr0081070 2 1 1 85 2L 18593337 18593355 CGATGAAGGTATCATGGCC 58 18593404 18593487 ATGACGAGCTAGCATTGGA 58 NA Drosophila melanogaster 61 CG4278 FBgn0014092 FBtr0080834 3 1 1 60 2L 16327798 16327816 GTCCCATCACGAAGTTCTG 58 16327839 16327858 ATGATTGCAGAGAAGAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CSN1a FBgn0028838 FBtr0080671 2 1 1 60 2L 14763561 14763579 TATACAAGTCTGCTGCCCA 58 14763603 14763621 TTATCGTAGTCGTAACGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42685 FBgn0261571 FBtr0302857 2 1 1 85 2L 14728026 14728260 AAAGTATATGTCCAAGAGCCC 57 14727961 14727979 TGACGGTTAAGCTGAAGTC 57 NA Drosophila melanogaster 61 Pgant35A FBgn0001970 FBtr0080629 3 1 1 60 2L 14359696 14359715 ACATTGGCTACAAGCATCAC 59 14359735 14359756 CGGAAGAGTCCTATGTTATTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ski6 FBgn0032487 FBtr0080483 2 1 1 60 2L 13221624 13221643 CGCCTTTCTTGAGATGAGTG 59 13221583 13221601 AGTCTCGATGACGGTTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst33A FBgn0028412 FBtr0080271,FBtr0080272 1 2 2 60 2L 11585776 11585795 GGGATCTCTATCGGAATGTG 57 11585735 11585755 TCAACTCTGGATACTTTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 7 7 84 2L 10259083 10259102 TGTTGATATGTGGCTCAAGG 58 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 CG7787 FBgn0032020 FBtr0079601 1 1 1 123 2L 8320513 8320531 CACCTACAACCAGGAGGAG 59 8320687 8320706 CTCGAATGTCATCATGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG31606 FBgn0051606 FBtr0079577 1 1 2 60 2L 8147831 8147852 TGATGAAGAGAATGTTGGAGGA 59 8147869 8147891 TCTGCATATTCGATATAGGGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 spz3 FBgn0031959 FBtr0079561 3 1 1 84 2L 7873954 7874042 GAGGTTTGCAGCAATACCC 59 7873888 7873906 AGGCGAGTAATCTATGCCA 58 NA Drosophila melanogaster 61 CG31904 FBgn0260479 FBtr0079502,FBtr0079501 2 2 2 113 2L 7735203 7735334 AACTACGACGTCGATTTCG 58 7735108 7735126 GTAGGACAGTCCATGTCCA 58 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079437,FBtr0079436 1 2 2 80 2L 7379581 7379601 CAGTTTCATTGGCGATATCCT 58 7379643 7379719 TACTTGGCATGGAACTCCT 58 NA Drosophila melanogaster 61 Tsp FBgn0031850 FBtr0079313,FBtr0079311,FBtr0114488,FBtr0079312,FBtr0079314 1 5 6 80 2L 6700616 6701764 TCTCACTCGATCCAGTTGC 59 6700554 6700575 TAATGTGTCGCGTTGATATGAC 59 NA Drosophila melanogaster 61 CG7742 FBgn0031690 FBtr0079092 2 1 1 86 2L 5213318 5213396 CATGACTACGATATTGAGTACTGG 58 5213255 5213275 GTCCTTGAAGACCAGTTTGTC 59 NA Drosophila melanogaster 61 CG3294 FBgn0031628 FBtr0077382,FBtr0077381 3 2 2 86 2L 4795559 4795848 ACACAAACGAACGATCTGC 59 4795896 4795916 TGGAGAACTCCACGTTTAGTC 59 NA Drosophila melanogaster 61 CG15434 FBgn0040705 FBtr0077440 2 1 1 60 2L 4454776 4454794 GGAGCTGCGAATCATTCTG 59 4454818 4454897 CACGTATTCCCTGACTCCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG31959 FBgn0051959 FBtr0077488 3 1 1 90 2L 3758912 3758992 TATCCACGCTACCAGAACAG 59 3759043 3759063 TACCAGTACTCAGAATCGAGG 58 NA Drosophila melanogaster 61 CG12674 FBgn0031388 FBtr0077827 1 1 1 112 2L 2080112 2080214 GGATGAAGCGCACAATCAG 59 2080287 2080308 TGCAGTACTCCTGGATATTCTG 59 NA Drosophila melanogaster 61 S FBgn0003310 FBtr0077993,FBtr0077994 2 2 2 85 2L 1052490 1052584 CAATACCTATCCCAAAGAGATTACC 59 1052429 1052447 AGTTGAACCACGAGGTCTC 59 NA Drosophila melanogaster 61 CG13950 FBgn0031289 FBtr0078018 2 1 1 107 2L 861252 861270 TCTCCATCTGCTTCCAGTG 59 861341 861430 AACTGTTGTCTTCACGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 lectin-21Cb FBgn0040106 FBtr0078046 2 1 1 93 2L 621127 621479 TGATCGATTATCCGCAGGG 59 621052 621070 TCGACCAGGCTGAATTCTC 59 NA Drosophila melanogaster 61 cbt FBgn0043364 FBtr0078083 3 1 2 118 2L 478200 479421 AACAAGTTGGAAATCGTCGC 59 478101 478123 GGATTTGGTGTAATAATCCCTCC 59 NA Drosophila melanogaster 61 alpha-Adaptin FBgn0015567 FBtr0089488,FBtr0089489 1 2 2 80 2L 410171 410192 GAGTTTCGCCAGAATTTAGGAC 59 410059 410133 CACAGGATTGAAGTTTGTCAGG 59 NA Drosophila melanogaster 61 CG3625 FBgn0031245 FBtr0113009 2 1 3 80 2L 284960 290824 TACTGGTCGCTGATAATTCAG 57 284900 284918 GGGTGTCAGCTCATTAGTG 57 NA Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0100309,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 3 8 8 80 2L 118981 118999 AAAGCGTTTATGCATTGCC 58 118863 118939 TCGTCTAAACCAGTTGTAGGT 58 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155,FBtr0100379,FBtr0078154 1 4 4 80 2L 124010 124094 GGGATTGGACTCTTATGTATCTG 58 123952 123972 CAATGTCATAGTAGAGTGCCC 58 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 1 2 3 186 2L 132079 132099 CACAAGACTTCCAAACATCGA 58 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 1 5 5 109 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155896 155914 TTCTTGTCCCTTACGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 2 5 5 110 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155897 155915 ATTCTTGTCCCTTACGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 spen FBgn0016977 FBtr0078122 2 1 3 80 2L 199973 200131 CCATAACACCGAATGATTCTACG 59 200169 200189 CTCGCATTAAATGATGCTGGT 59 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0078037 3 3 5 131 2L 836577 836595 CACTGAGAACTTTGCCGAC 59 835466 835484 GCATATCGATCCTCACTGG 57 NA DesignNoJunction Drosophila melanogaster 61 capt FBgn0261458 FBtr0100022,FBtr0100023 1 2 2 80 2L 1152224 1152242 GTGGAGATCGTCAACTCCA 59 1152101 1152183 TAAAGCCAACTCGGTATAATCG 58 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 3 1 1 60 2L 2287696 2287714 CTGAATCCCAACGATAGGC 58 2287592 2287612 TATAGTTAAGCCAGGCATTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 2 2 2 116 2L 2309692 2310136 GATTTCCTCAACGATTACAGCA 59 2309597 2309615 ATTATCATCCCGCCGATGG 59 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077783,FBtr0290207,FBtr0077782,FBtr0290208 3 4 4 246 2L 2492405 2492500 CCAAATCAATGCCATTAAGCAG 59 2492123 2492141 GTCCAAATTCTCGTCGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 3 2 4 80 2L 2490783 2490802 CACTAAACTCGTCTCACAGG 58 2490668 2490740 ACCGGAAGATTATGTCGCT 58 NA Drosophila melanogaster 61 CG31689 FBgn0031449 FBtr0077707,FBtr0077705,FBtr0077708,FBtr0077706 3 4 4 81 2L 2738319 2738337 CACGGAATACATGCGACTG 59 2738380 2738464 CTTCAGGTAGGTAAGAGTCCA 58 NA Drosophila melanogaster 61 CG3332 FBgn0031514 FBtr0077608 2 1 2 156 2L 3277970 3280316 TACTTTCAGTAACCTGCAGGG 59 3277834 3277852 AGTGCGTCGGTTCTTATCC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 1 4 9 80 2L 3884509 3886994 CAATGAATCAGGAGTCACAGG 58 3884449 3884468 ACAGTTGATTGCGTTTCCAG 59 NA Drosophila melanogaster 61 CG3714 FBgn0031589 FBtr0113020,FBtr0077480,FBtr0077483,FBtr0077482,FBtr0077479 3 5 6 83 2L 4192685 4192706 GGAACCTTAAAGACAACAACCA 59 4190815 4192641 CAAGCCACTCCTGAATGAC 58 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089268 3 1 6 81 2L 4304830 4305357 GCTGTAATCATGGATAAGGCG 59 4305400 4305418 TGGTCAGCCTCTCATTCAC 59 NA Drosophila melanogaster 61 ine FBgn0011603 FBtr0301408,FBtr0077448,FBtr0077446,FBtr0301407 1 4 5 111 2L 4473964 4474339 AGTCTCAGGTTATCTTCCAGG 58 4473873 4473891 CTGTGGTTGCATGTAGAGC 58 NA Drosophila melanogaster 61 pgant5 FBgn0031681 FBtr0079026 3 1 2 80 2L 5077584 5077604 CTATGAGATTGGCTCCTACGA 58 5077247 5077542 CACTGCCAAATACGGAACG 59 NA Drosophila melanogaster 61 Cap-D3 FBgn0051989 FBtr0079097,FBtr0301318,FBtr0301319 2 3 3 80 2L 5533671 5533690 GCTGATGACTCAACCAAGAG 58 5533732 5533811 AGTCTGGGTGTTACTATGGT 57 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 3 4 4 99 2L 5719427 5719526 AAATGGTGGTATCACGTTGG 58 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 2 2 2 80 2L 5735108 5735127 CAGGAACCAATCTTTGGCAG 59 5734811 5735068 GAAGAAGACCATGGTCATTACC 58 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079229,FBtr0079228 3 2 2 195 2L 6008257 6008275 CCACACCTGTATTGCTCCT 59 6008022 6008098 GACATGGAACTCGGTTCGA 59 NA Drosophila melanogaster 61 Kr-h1 FBgn0028420 FBtr0079194,FBtr0079195,FBtr0290297 3 3 3 118 2L 6095044 6095062 GCTAACTACGATGACACCC 57 6095143 6095246 AGAGCGGATTCATATTTGGG 57 NA Drosophila melanogaster 61 Cpr FBgn0015623 FBtr0079251 1 1 2 155 2L 6343933 6344168 GAATGGAAGGTCTTTGGCT 57 6344347 6344365 CGTGATGAAGTCATCCTCG 58 NA Drosophila melanogaster 61 Tango1 FBgn0031842 FBtr0079296 2 1 2 97 2L 6652561 6653221 GTCAGAATGAAGAGGCCCA 59 6653280 6653300 CTCTGATTGGTTGAAGTCCTG 58 NA Drosophila melanogaster 61 Nha1 FBgn0031865 FBtr0079374,FBtr0079373 3 2 2 83 2L 6862440 6862458 CGGTGGCTACCTAATATCG 57 6862304 6862394 CAGCCTACATTCTGGAAGAG 57 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 2 7 7 83 2L 7036654 7036674 AAGATCGATGCCATTCAACTG 59 7036719 7036826 GTCAGCATTGTGGTACGTG 59 NA Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 1 2 2 80 2L 7447295 7447519 GATCATGCACAAGGAAATGG 57 7447234 7447252 AGACTGAGATCAATTGGCG 57 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079459 1 1 5 97 2L 7459991 7460010 CATTCGGTTGTCTCCATAGC 58 7455745 7459932 GCTAGGTTCTTCAACACCTG 58 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079512 2 1 5 97 2L 7697533 7698732 CAACACTGAATTCCCAATTGC 58 7697456 7697479 CTTGATTAGGATGTGAAGCTATCG 59 NA Drosophila melanogaster 61 CG13796 FBgn0031939 FBtr0114496,FBtr0079504,FBtr0079503,FBtr0079505 2 4 4 80 2L 7728554 7728577 GTGCCTTACTCATATTACCATTGG 59 7728433 7728516 CCAACGTGATCCTCAAAGTG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 2 4 4 95 2L 8536986 8537004 AATAATTCGCTGACGGTGC 59 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 2 2 2 80 2L 8992726 8992746 TCCCACTACACAACTGTAGTC 59 8992788 8992863 CATTCCTGGCATGGAAGGA 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 2 3 4 84 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519739 TAGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 3 2 3 98 2L 9553518 9553597 ATGGACTCAAGTACGAGGG 58 9553438 9553456 TCTTGTACTTGCCCTCCTC 58 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 1 2 2 82 2L 9742429 9742447 GATCCGGAGCTCAATTCCA 59 9733523 9742384 TTGTGCGTGTCATTGATACC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 3 6 9 92 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905036 9905140 GAAGTATTAGCGACGAACGG 58 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 1 2 4 88 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264880 10264955 TTGAATTAACGACGCGCTC 59 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 3 2 2 60 2L 10300419 10300440 AATATCACGGGAAAGGATTTGG 58 10300380 10300400 TGGAGCTATTGACAAAGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079990 2 2 3 182 2L 10322827 10323683 ATGATAAGGATCCCTACCGGA 59 10323895 10323913 GATCATCGGTTTGCAGGTG 59 NA Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 2 2 2 82 2L 10440043 10440064 GCCCTTCATAGATGTTACTCCA 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819 2 1 2 80 2L 10646496 10646516 GCAACTCTCAGAAATGGATCC 59 10646552 10648665 TAGTATTATCCAAGATGTCCTCCTG 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 3 9 10 94 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10825999 10826018 GATCAGATCGGATTTCCTGG 58 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 1 4 4 200 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965647 10965665 GTTGTAGTACTCCAGGGCG 59 NA Drosophila melanogaster 61 CG33129 FBgn0053129 FBtr0080169,FBtr0080170,FBtr0080171,FBtr0080172 1 4 4 200 2L 10965898 10966001 GCAAAGTTCATTGACCAATACG 58 10965647 10965665 GTTGTAGTACTCCAGGGCG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300522 1 1 8 82 2L 12477157 12498533 TTTCATCGGTGCATCTGGA 59 12458202 12458220 TGAGATGCGACTTGACCAG 59 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642 3 1 2 119 2L 12614103 12614121 TAAGGTCCTGGAACTGACC 58 12614202 12622984 CGACTGATATCATTTGGGTCC 58 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0113039,FBtr0302139 2 3 9 80 2L 13274314 13274337 GTATCATACCGATAACTCTAGAGC 58 13274374 13274708 GTGGGTAATTCTGGTAACCAC 58 NA Drosophila melanogaster 61 CG9008 FBgn0028540 FBtr0080576 3 1 2 97 2L 13779657 13779675 AACAATACAACCTGCACCA 57 13776142 13777775 AATGAGGCTAGTTTGCTGAC 58 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080546 1 1 3 94 2L 13836347 13836367 TGCCATATACGAACTGATCGA 59 13836420 13891308 CAAACGAATCTTCAATGCAGAC 58 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0080630 3 1 2 81 2L 14364534 14364555 GCTAGTGACAACATCATCAAGG 59 14364595 14364691 CAGTGGCAGTCCTTATTATGC 59 NA Drosophila melanogaster 61 CG31775 FBgn0028537 FBtr0301739,FBtr0080691 2 2 2 60 2L 14737529 14737548 GTGGATTTGGTGATCAGCAG 59 14737488 14737506 AATCCACCTCCGAATCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 ck FBgn0000317 FBtr0080723,FBtr0080724 3 2 2 80 2L 15049119 15049137 TCGTATGGACACCACTTCG 59 15049001 15049077 TCTTGGAACTCCTTACTCCTG 58 NA Drosophila melanogaster 61 ZnT35C FBgn0028516 FBtr0080715,FBtr0080714 3 2 2 92 2L 15230349 15236618 TTGGTGAATGTCATCATGGG 58 15230276 15230294 GTTCTTGGAACCACCATGG 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 1 4 4 80 2L 15266639 15266657 ATCGTAAGCACGAGATCGA 58 15266508 15266598 CTGATACTAGCAAGTTGTGAGC 59 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112944,FBtr0302502 2 2 3 112 2L 15679211 15679229 ACATTGGAGCTGCTTTGTG 59 15673029 15679135 AATTGCGAACCTCGTTGTG 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 3 3 3 83 2L 15958576 15958708 GGACTCGAGCATATGTCTG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090005 1 1 4 80 2L 16177387 16177689 AGAGGAAGACTCCAATTCCG 59 16177730 16177750 GTCTTCTTCATGCTGACTTCG 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090006,FBtr0090004,FBtr0090005 2 3 4 80 2L 16186143 16189035 ATAACAATGTCTACGCACCC 58 16189078 16189096 GATCGTAGGGACTAGCTGG 58 NA Drosophila melanogaster 61 cni FBgn0000339 FBtr0080849,FBtr0080848 3 2 2 95 2L 16310058 16310079 GATACTTTGTACCGGAACATGC 59 16309915 16310002 GAGCGAATAAACCATGCCG 59 NA Drosophila melanogaster 61 VhaSFD FBgn0027779 FBtr0080941 1 1 3 81 2L 16725939 16725957 GAAAGCTATCGCGAAGTGG 59 16724978 16725895 GGATGTATTCGTTGTTCGGT 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 1 7 10 80 2L 17408956 17408976 CAGCAGAAGAATGATGCACTC 59 17409018 17409103 GAAGGCATGAGGTTTGGTG 59 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231 1 1 4 92 2L 19183327 19183395 AATCGTAAATCATGTGCTGC 57 19183254 19183272 GTACACAGCAGAGTTCCAC 58 NA InUTR Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 1 2 2 262 2L 19767343 19767750 TCTATCACAAGCCAGCCTG 59 19767099 19767117 TCTGGAACCAGGTCTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 rtGEF FBgn0015803 FBtr0081357,FBtr0302106,FBtr0112885,FBtr0081356,FBtr0112884 3 5 5 83 2L 20355740 20355817 ACGCAAATACTCAGTCAGGA 59 20355862 20355881 GATAAGCAAATCCTCGTGCG 59 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081390 2 1 2 81 2L 20677479 20677555 GAACGATAGCTAAAGCATTCC 57 20677597 20677616 AACTGAACATTGTTGTCGTC 57 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826077 20826641 CACTTGTCATTGTCGATGGT 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0299912 2 1 7 122 2L 21124606 21125357 TAGAAATAGCCGAGGAGTGC 59 21126161 21126179 TATTGGCACGATCCGAGTC 59 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0081483 2 1 3 96 2L 21280362 21280380 TCGGCAACTACTATGTCCG 59 21280439 21281142 AGCTGGGATTCATCATTGTG 58 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081508 2 1 4 98 2L 21291576 21291600 CATCCTACCTTTAGTCGTTAATGAC 59 21297327 21297346 ATTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Df31 FBgn0022893 FBtr0085919,FBtr0085920,FBtr0100293 3 3 3 143 2L 21627752 21627854 GGTGACTCAACAGATGCTC 58 21627627 21627645 CCCATTCTGAACCTCATCC 57 NA Drosophila melanogaster 61 Ef2b FBgn0000559 FBtr0085913,FBtr0085912,FBtr0085911 1 3 3 80 2L 21681386 21681405 GAGACTCGTTTCACTGACAC 58 21681266 21681346 AAAGTACATGGAAATGGCAGTC 59 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0301000 3 1 4 153 2L 21719622 21719642 TAGCAGCATTATGGAAGACGA 59 21720471 21725094 TTTAAAGCGCTGGAGATTGC 59 NA Drosophila melanogaster 61 CG31612 FBgn0051612 FBtr0300999 2 1 2 80 2L 21775434 21795253 ATCCACAGATAACCATGAACG 58 21775374 21775394 AGAGTCCAAGTATAGTTGCGT 59 NA InUTR Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 1 4 6 103 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737574 22741714 AAAGCCAGTTGACTCTCGT 59 NA Drosophila melanogaster 61 bft FBgn0041606 FBtr0080319 2 1 2 130 2L 11958662 11961940 AGTATGCCATAAGACAAATGCC 59 11958553 11958571 CAACCCAAACAGGAAACGG 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 2 5 5 80 2R 19472 19550 GTAATCACTTCAGTTGAGGTGG 59 19586 19609 GTCTAAATCAAGGAGATCGTACTG 58 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 2 3 5 170 2R 614797 614817 CACAAATTCTTGACGTCAGCA 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086069,FBtr0086070 2 3 4 96 2R 1414859 1414877 GACATCCTAATGGCTACGC 58 1416314 1426767 AGGTAATATTGTGACCTCTGGA 58 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504 3 1 4 88 2R 1605264 1613339 CTGTGATGCATTGGCAGAG 59 1605194 1605212 ATTGCTCCCTTGATGTGCT 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 3 4 4 86 2R 1925633 1925653 ATTGAGATGGGCTTCAAACTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 Adf1 FBgn0000054 FBtr0086111,FBtr0086113,FBtr0086112 3 3 3 136 2R 2554511 2554590 TCCGCATGAAATTACTGTCAC 59 2554688 2554706 TGGTGTTGAGCATGTTGTC 58 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 1 3 5 122 2R 2641934 2642215 GTGAAGCCCACAGTATCCA 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 Spn4 FBgn0028985 FBtr0086205,FBtr0300336,FBtr0086204,FBtr0086197,FBtr0086201,FBtr0086196,FBtr0086198,FBtr0086202,FBtr0086199,FBtr0086200,FBtr0086203 3 11 11 89 2R 2764982 2765001 AAAGGTAGCGCTCAAATTGC 59 2764848 2764866 AACATCCTTGACATGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111063,FBtr0089016,FBtr0111061,FBtr0111065,FBtr0111101,FBtr0111071,FBtr0089019,FBtr0111074,FBtr0089018 3 10 59 81 2R 3219872 3225006 AGTTAATGTACCTCCCAGATGG 59 3219812 3219830 CTTGCATTCAACCTTGGCA 59 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 1 5 8 107 2R 3355321 3356622 CTATGCCGTTGATGTGCTG 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 3 3 3 82 2R 3490154 3490639 TTTGGATAAAGTGGGTCTTCG 58 3490092 3490110 CCGAGAAGACCTTGATCCA 58 NA Drosophila melanogaster 61 Nup44A FBgn0033247 FBtr0088862,FBtr0088860,FBtr0088861 2 3 3 92 2R 3877485 3877505 GACCACAAGGATGTGATACAC 58 3877559 3877638 GTCCCAAATCTTGACGGTC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 2 7 7 80 2R 3961943 3961963 TATCAGCAACCAGTGTATTCC 57 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 2 4 9 149 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564107 4565947 GCACGATCTTTGCCTTCAC 59 NA Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088718 3 1 3 93 2R 4607280 4607371 CCCTCAACTATCAGAACTTCGA 59 4607208 4607226 TTTCCCTTGATGGTTCCGT 59 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 2 3 3 81 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619837 4619857 AACTTCGAGATGAAGAAGTCG 58 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088637,FBtr0088639 3 2 4 84 2R 4758458 4758477 ATCCTTTGGTAAACAGTGCG 58 4758521 4759738 GTTCAACGAGAAGCTAATTGTG 58 NA Drosophila melanogaster 61 sec31 FBgn0033339 FBtr0088643 3 1 2 162 2R 4782942 4782961 GAGCTTAATCCCAAGGAGGA 58 4783144 4783468 TATCTTGCGTCTGATGGGT 58 NA Drosophila melanogaster 61 MrgBP FBgn0033341 FBtr0088684 2 1 1 148 2R 4788481 4788499 ATTACGGAACGCTACAGAC 57 4788299 4788317 GTCCTTGGTGGAATTCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Pmm45A FBgn0033377 FBtr0088630,FBtr0088629 2 2 2 69 2R 4996587 4996605 TGACTCCATGAACGAGCTG 59 4996472 4996494 GTACTGTTCCTTGATGTACTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0302505,FBtr0302507 2 2 12 182 2R 5006308 5006327 CACATCAACGTCAAACAGTG 58 5006543 5009250 TCATTATCCTCGGATTGCTG 57 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 3 2 4 144 2R 5119290 5119308 GTCACGTAAACCGGATACC 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595,FBtr0088596 2 2 2 107 2R 5175034 5175053 ATGGACTCAGAACCACTGTC 59 5175120 5175196 ATGACGTATTTGAATAGCACCG 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 3 2 5 92 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354442 5354461 GTATTCCAACGATGACGCTG 59 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0299847,FBtr0299846 1 2 5 91 2R 5346255 5354387 GAGTGTTAATGGCGAACCC 58 5354442 5354460 TATTCCAACGATGACGCTG 58 NA Drosophila melanogaster 61 CG12128 FBgn0033473 FBtr0088393,FBtr0088394 1 2 2 80 2R 5915136 5915219 GAACCTCAAAGTGAGAGCTG 58 5915261 5915280 ATAAACACCTGTTTCCCGAC 58 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 1 4 4 80 2R 6041760 6041971 CTTCTACCATGTGATGGTATTCC 58 6041702 6041722 TCTTCGTACTCCTTGATGGTG 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 3 4 4 80 2R 6041027 6041047 CTATATGTGGGAGAAGGACGT 58 6040909 6040985 GTGCAGAGTGTGATCACAC 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 3 16 17 82 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193033 6193051 GAAGTTGTATTTGGCACGG 57 NA Drosophila melanogaster 61 CPTI FBgn0027842 FBtr0088308,FBtr0088307 1 2 4 139 2R 6359166 6359186 ACAAGTGTTTCACTGTCTGTG 59 6358239 6358721 ACCCGTTTCGTCATATCCA 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089361 2 1 26 95 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6380075 6419548 AGGATCGGATAGATGTCTTGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286 1 1 26 117 2R 6419689 6419707 GGTGGCGAAGGATCTAGTC 59 6410460 6419549 AAAGCGTCCTTAAATCTTGGG 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 1 5 5 105 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 3 4 4 80 2R 7101697 7101781 AAGTAGTGATACGGATGAGTCC 59 7101821 7101840 GGCGTCATTGATAACGAGAG 58 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 1 2 2 80 2R 7837687 7843103 TATACAAGGAGCACATTCAGGA 59 7843144 7843162 CGAAGACGATCACTTTGGC 59 NA Drosophila melanogaster 61 CG33145 FBgn0053145 FBtr0088047,FBtr0088048 1 2 2 71 2R 7869941 7869960 GGATGTACACAAGCGTAGTG 58 7869825 7869843 AGGTAGTCAGCTATGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025,FBtr0088024 3 3 3 86 2R 7914603 7914621 TGCTGGTCTTCTTCAACGA 59 7914479 7914555 GCGTGCAATTATCTAGTTTGC 58 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898 2 1 2 84 2R 8219529 8219547 CTCTTTGGGAGCTAACCTG 57 8219593 8219664 GTAATTGAATCTTCGTCGTGG 57 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087947 1 1 2 94 2R 8378198 8378839 TACGAAAGCCTACGCTATCTC 59 8378124 8378142 GTCAGGATGAATATGGCGC 58 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087879 3 1 8 84 2R 8561422 8562504 GTATATCAGCAGTCAGAGACG 57 8560799 8560817 GTCGAATAGCACATCCTCC 57 NA Drosophila melanogaster 61 nemy FBgn0033765 FBtr0087878,FBtr0087875 3 2 8 97 2R 8561427 8563643 GATAATGCCAAGCTCAGTCAG 59 8560791 8560809 GCGAACATGTCGAATAGCA 58 NA Drosophila melanogaster 61 CG3814 FBgn0025692 FBtr0087814,FBtr0087813 3 2 2 142 2R 8763437 8763615 GATATTGATGTGCCAATTGCTG 58 8763254 8763274 CCATACAGATCATGGTCACGA 59 NA Drosophila melanogaster 61 Kdm4B FBgn0053182 FBtr0302054,FBtr0302053,FBtr0087770,FBtr0302052 1 4 4 80 2R 9074535 9074555 ATATTTGCGCCACAAGATGAC 59 9074417 9074494 TCCTGCGTGATCTTACTGAC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100453 3 1 3 288 2R 9842220 9842238 GGAGGTCATCTGGAGATCC 58 9842545 9842733 GACTTGGGCTTGTTCTTGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 3 3 5 171 2R 10797870 10797888 GTAAAGCGACGCAAGTCTC 59 10793447 10797735 CAATGCAGGAATCTGCCAC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 2 2 6 80 2R 10834799 10835160 TGGATTGGGAATTGATAGCTC 57 10834739 10834758 TTGTCACATAGGGATCTCCC 58 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 3 3 3 105 2R 10865419 10865743 GCTCATTAAGGTTCGCCAG 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 CG8179 FBgn0034020 FBtr0301638 3 1 1 212 2R 11354259 11354278 GGGACCAGATTGTCATACAG 57 11354528 11354546 TCCTACGCTTGGTCTTGTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12963 FBgn0034031 FBtr0113082 2 1 5 94 2R 11443855 11443933 TGATAAGGGCCTATATCTGTCC 58 11449321 11449342 CTGTGCGTTGAATACATTACGA 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556,FBtr0302555 3 2 3 62 2R 11588903 11588921 CTGGCAGGATGAGACTTCC 59 11588804 11588822 AAAGCCGTGATGAAGAAGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12970 FBgn0034047 FBtr0087289,FBtr0087288 1 2 2 80 2R 11743567 11743587 GGATAAGGTGTACTCGGAGTG 59 11743629 11743964 CCATATCCACCGCAAAGTG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 3 8 13 90 2R 11835571 11835589 ATCCGCTGCTAACAAACCT 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 3 3 4 94 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304306 12304324 ATCTGGTCATCCATGGAGC 59 NA Nonspecific Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 3 6 6 80 2R 12676159 12676302 ACTACACTATAGCAGCCTCG 58 12676344 12676363 CATCCAACTGCTTGATGGAG 59 NA Drosophila melanogaster 61 CG6967 FBgn0034187 FBtr0300276,FBtr0300277 2 2 2 60 2R 12951498 12951519 ATACATTCTATTCGGACCACCA 59 12951780 12951799 TAGAATGGCCTCCACAATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG30460 FBgn0050460 FBtr0302611,FBtr0300958 1 2 9 80 2R 12957456 12957475 TGTATCGCTTGAGGATAACG 57 12955712 12957416 GAATCAGACCTATTTGAACGAC 57 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086993 1 1 7 143 2R 13163434 13163452 CTGCAATTGGAGGTCTGTC 58 13163557 13183348 TGTACATACCTTGATGCTGTC 57 NA Drosophila melanogaster 61 CG4853 FBgn0034230 FBtr0086938,FBtr0086939 3 2 2 80 2R 13403019 13403094 TGCGGTTTCTATCCTAAACAC 58 13403135 13403154 ATGTCTTTGGCGTAAACTGG 58 NA Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 2 3 3 80 2R 13461765 13461849 AGAGAACGAGCTTATCTTCCTG 59 13461887 13461908 GTCTTTGAGCACTTGAGAAAGG 59 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 2 2 4 80 2R 14018832 14018852 TTGGAAACACTGAAGGATCTG 58 14018536 14018791 AGAGTCGTTAAACAGACCCA 58 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301550,FBtr0301547,FBtr0301551 1 3 6 80 2R 14169187 14169205 CTATCCCGCCATCTACCAG 59 14169010 14169145 ATGTAATACCGTCTCAGCTCC 59 NA Drosophila melanogaster 61 Jheh2 FBgn0034405 FBtr0089970 3 1 2 103 2R 14744462 14744481 GACTTCATCCCTCTCCTGAC 59 14744186 14744396 TTTGAAGAGCCCTGAGACC 59 NA Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 3 3 3 93 2R 15280209 15280227 ATGACTATTGTGAGCGCTG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 1 3 19 89 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365202 AAAGGTTGAACGTGATGGA 57 NA Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 3 2 2 80 2R 16154354 16154372 AGGTGAAGAATCTGCCGAG 59 16154413 16154483 ACAGGAGTATCTTGGAGTTTCC 59 NA Drosophila melanogaster 61 CG8920 FBgn0027529 FBtr0086280,FBtr0086279 2 2 5 85 2R 16211841 16211859 TATTCATCCGCGAGGATCC 59 16211906 16212362 ATGAATGGAGCTAGCCATCTC 59 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629,FBtr0113100 3 2 2 80 2R 17054330 17054405 ACGTAATGAAGGGAAATGCTG 59 17054270 17054289 CCTTGTTAAGGTCCATGCTG 59 NA Drosophila melanogaster 61 ASPP FBgn0034606 FBtr0071622,FBtr0071623 1 2 2 97 2R 17107085 17107186 CATTGTCAAATTCCTCGTTGAG 58 17107009 17107027 ACAGATTATTGCAGCTGGC 58 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 1 2 2 85 2R 17442488 17442506 ACAACATACGGGAGGTCAC 59 17442552 17442709 GCGAATGATTTGTAGTTTGGGA 59 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071661 3 1 2 166 2R 17540059 17542288 AAGTACAAAGGCGTCATGC 58 17542480 17542498 TGTCCATTCTTGTGCACCT 59 NA Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299553 2 1 5 182 2R 17949076 17955939 AAACTAGCAAGGCAACTGG 58 17956084 17956103 CACATATGAGTAGGGTTGCA 57 NA Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 2 8 8 102 2R 18612064 18612082 AAGGGACAGAACATTCCCA 58 18611607 18611625 ATGACACGTTGATCGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302771 3 1 13 92 2R 18817766 18817784 AACCTGTGAGTGGTCTCAG 59 18817840 18817924 TCTCTTCCAGCAACTGCTC 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080 2 1 2 80 2R 19571963 19571982 CAATGTCCGGATACAAGAGG 58 19572024 19572094 ACTTCCGAGTGATCTTTCAG 57 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 2 4 4 80 2R 19801155 19801173 GCACAGTCTACTTGTCCAG 57 19801216 19801294 TAGACTGACCGAATTTGTCC 57 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072189 3 1 2 93 2R 19924562 19924581 GACAAGTACATGCAGTCTCG 58 19924428 19924509 TGAATAGTTCCCTAACGTTCAC 58 NA Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0072179 3 1 2 126 2R 19957651 19957669 CACCAATAGGCACTACGAG 57 19957759 19959525 TAACCACACTACACCAACG 57 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0100389,FBtr0072411 1 2 2 90 2R 20828706 20828724 AATTCCCTGGACAACCTGG 59 20828567 20828652 ATGGAACGGTTCCTTCTCC 59 NA Drosophila melanogaster 61 p130CAS FBgn0035101 FBtr0299864 2 1 6 81 3L 153295 167485 AAGTGCGCAGAAACTTTACG 59 167529 167547 ATCACCCTTCTTGAAGGGC 59 NA Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 1 4 4 93 3L 177318 177390 ATCTTAGCACAACCGTTCAC 58 177244 177262 GATCAAGGGACACTCTGCA 59 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 2 3 3 80 3L 307625 307710 GATTCAAGAGATCAAGGTCCAC 58 307566 307584 TTCGCAGCTCAAATTGCTG 59 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072554 3 1 2 156 3L 593653 593736 GCTGAACTATTACCACGCA 58 593856 593874 GGAAGCTCATTATCTGCGA 57 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112911,FBtr0072617,FBtr0072616,FBtr0112909 1 4 6 80 3L 982230 982248 TGCATCTCTATGGTCTGGG 58 982289 983867 AGTCGATCATTTCCTTGATCAG 58 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 2 5 5 99 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743974 1743992 CTTGAGCAGAACAGGATCC 57 NA Drosophila melanogaster 61 CG8001 FBgn0035268 FBtr0072774 3 1 2 83 3L 1757191 1757312 AACAACCACAGAGGTTGAG 57 1757359 1757377 TAGTCTACTTTCTCGCGGT 57 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831 1 1 2 80 3L 2154777 2156649 CATTAACAGGAAAGAGTGTCGT 58 2154718 2154736 TCCTTCCACTGTCATGGAG 58 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072960 2 1 5 96 3L 2558032 2563832 TTGATCATGAAGCGCAAGC 59 2557954 2557972 CATTGACATTGACGTGCGA 59 NA Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 3 3 3 89 3L 2723388 2723473 AGGCTATAGTGGTGAAGCAG 59 2723318 2723336 GATGATTGACCGGACTTGC 59 NA Drosophila melanogaster 61 gry FBgn0035416 FBtr0073041,FBtr0073042 2 2 2 80 3L 3202189 3209297 TCTGAGGAATAGTGTATTCCTCAC 59 3209333 3209354 CCCACGTCTATTTGAATCTGAG 59 NA Drosophila melanogaster 61 CG12010 FBgn0035443 FBtr0073075 1 1 2 155 3L 3375160 3375238 GAAACTACGTCCATTATTGCCA 59 3375354 3375372 ATGATGCCTCGAGGAAGTG 59 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 3 6 13 178 3L 3578468 3593334 TGCAGATATGGAGACTGGC 59 3593476 3593494 AAGACCTCGGATTTGGGTC 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0073186,FBtr0073187 2 2 5 89 3L 3718982 3721547 ATTAGACTATGCAGGCAGCA 59 3718912 3718930 TTCGCGTATCACAAATGGC 59 NA Drosophila melanogaster 61 tipE FBgn0003710 FBtr0073220,FBtr0073219 2 2 2 122 3L 4191776 4191794 CAACTCGGAGATCAACTCG 58 4191880 4192203 TTGCTCAAGTTTCCTTGCA 58 NA Drosophila melanogaster 61 Uev1A FBgn0035601 FBtr0077155,FBtr0077156 3 2 2 130 3L 5357299 5358050 CGCCTAGAACACCATTCGA 59 5357187 5357208 GCCATTGTTCTGATTAATGCAG 58 NA DesignRelaxed Drosophila melanogaster 61 Sucb FBgn0029118 FBtr0077134,FBtr0077135 1 2 2 80 3L 5556488 5556603 TCGTTCATAAGGTTCCCGT 58 5556426 5556444 TGGCCACTCCATACTTCTG 59 NA Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 2 1 1 60 3L 6027463 6027484 GAATACATGGGTACTAACTGCT 57 6027372 6027391 GTAGATGGTCACGGAAGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 3 1 1 60 3L 6027462 6027484 GAATACATGGGTACTAACTGCTG 59 6027372 6027391 GTAGATGGTCACGGAAGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 3 5 6 107 3L 6555424 6555442 CTTACGGCCATGTCATGAG 58 6555512 6583716 ACATAGATGTCTTCTCCCGT 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 1 6 11 80 3L 7005318 7005337 CATTGGCAATGATTTGCACG 59 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 1 2 4 84 3L 7059753 7059772 CATCAATCTCAAGGATCGGG 58 7059819 7059971 TAATCAGTCAGCCACTCCC 58 NA InUTR Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0300824 3 1 2 80 3L 7061714 7061786 TGCTTTAATGGCGTATGACC 58 7061653 7061674 TATATGCTCAGTGAGTAAGTGC 57 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 3 2 15 86 3L 7655388 7656366 TGAAATTGATCCGGTTGCA 58 7655320 7655339 TCACTCTCGTCTTCAGTCTG 58 NA Drosophila melanogaster 61 eIF4E-5 FBgn0035823 FBtr0076747 3 1 1 62 3L 7888446 7888467 TGAAGATTGGATGCGATTACTC 58 7888547 7888565 CTTCATCCTCCCACATGGG 59 NA DesignNoJunction Drosophila melanogaster 61 syd FBgn0024187 FBtr0300412,FBtr0076768 2 2 4 155 3L 7926881 7928486 TCGGAGAAGAATGAACAGGT 58 7926209 7926227 ATAGGAGGCATCTAGGCAC 58 NA Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 2 2 2 98 3L 8048536 8048992 CCATTGAACTTGTTGAGAGCC 59 8048458 8048476 CCGAGGAGCTAATGGAGTG 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 1 4 5 84 3L 8092629 8096005 TCATTAAGGAAGCCCTCTCAC 59 8096051 8096069 TGCACCGTAATACTGGAGG 59 NA Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 3 2 2 108 3L 8172114 8172135 CTGACAGCCATTTACATTAGGA 58 8171964 8172045 ACTGTAGGTAAGTCTGGCT 57 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675 2 1 5 132 3L 8346684 8346702 CAAGAACAGCCCAGTACCT 59 8346518 8346589 AGTGGGACTCACAAATAGCC 59 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089563,FBtr0089562,FBtr0301155 3 5 13 141 3L 8628168 8628785 AGATCCACAGTTCCCTTCG 59 8630575 8630594 GAATGGCTCTGTAGGTTTCG 58 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 1 4 7 80 3L 8904059 8904130 CGTTTAATGGAACTCCTTCTCTG 59 8904001 8904023 GACGACCAACATAGATCATAGGA 59 NA Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273290,FBtr0273286 2 4 7 80 3L 8904067 8904136 AGATCGCGTTTAATGGAACTC 58 8904007 8904031 CAACATAGATCATAGGATTGACAGG 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0076565 1 2 5 120 3L 8927237 8927519 ATGGCCGTTTACCAGTCTC 59 8927135 8927155 GTCCCAGTAGTACATTAGCCC 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 3 2 4 114 3L 8960607 8960689 GTCAAAGAACAGTCGGGTC 58 8960767 8960785 GAACTTCAGGCCGAATAGG 58 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 1 3 3 80 3L 8977956 8977976 TTCAACTCAGAAATCTCGAGG 57 8977751 8977915 TCTTTGGAAGCTCGATTCTG 58 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089492 2 1 6 81 3L 9338095 9338116 GTAACTTTAACCTTCCTGCTGG 59 9338156 9339699 GATCATTCGTTTGGTTCAACG 58 NA Drosophila melanogaster 61 UGP FBgn0035978 FBtr0076500,FBtr0076501 1 2 4 98 3L 9346894 9346914 ACTGGAACAAGATTCAGAAGC 58 9346313 9346615 CCAACATGTTGCGGATCTC 59 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076336,FBtr0076334,FBtr0076332,FBtr0076331,FBtr0076333,FBtr0076335,FBtr0100385 1 7 8 94 3L 9817656 9817676 GACGATCAAATAACGAAGCCC 59 9817732 9823743 CGCTTGTAGCCACATTTGG 59 NA Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 2 1 1 60 3L 9883639 9883659 TGCATGGATCTTATGAAGCAC 58 9883899 9883917 GTAAAGTCCTCCATGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 1 2 2 73 3L 10639969 10639987 CGTGCTGAAGTTCGATGAG 59 10634846 10634864 CGATGCGTCTGTAGTAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 simj FBgn0010762 FBtr0076264 2 1 3 80 3L 10681686 10681799 AGCTCTTTAGAGGACTTGGTG 59 10681840 10681859 CCATGGCCATTTGGTAAGAG 59 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 1 3 3 80 3L 10889924 10889946 TCTACGACAAGGATGGATTTAGG 59 10889712 10889884 TTACCAAGAGTACCTCCGC 58 NA Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347,FBtr0300349,FBtr0300348 2 3 3 228 3L 11166959 11166977 GAAGTATCTGCTCTTCGCC 58 11167239 11167654 AACATAGAGCTTCTCGGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG14142 FBgn0036143 FBtr0300347 1 1 3 163 3L 11167856 11167989 AAGTTCGAACGGATCTGGA 58 11168116 11168196 AGGAACCGCATAGCTACTC 59 NA Drosophila melanogaster 61 scyl FBgn0041094 FBtr0076168 1 1 2 86 3L 11246021 11246039 ATCATCTACGGTAGCCTGC 59 11246831 11246849 CAGGTCCAGAGTGTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 3 2 2 81 3L 11513444 11513462 CAGTCAATTCACAGCGGAG 58 11513300 11513400 GAGCACAACATATCTGGCTC 58 NA Nonspecific Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139 2 1 2 80 3L 11614362 11614380 TGACACCTGAGGAAATCGA 58 11613752 11614318 GGTGACCGTATTGGTTGAG 58 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 1 3 4 80 3L 11777435 11777514 TTCACTTGCGATATTGATTCGG 59 11777376 11777394 GGTACCCTTGACTTGTCCC 59 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0110869,FBtr0110868 3 2 6 65 3L 11811197 11811215 TGGTACACAGTCGACAAGG 59 11810715 11810734 CATATCATCGTTCACGTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070 2 1 2 96 3L 11883616 11883634 AGCATAAATGTCCTGCGGA 59 11881956 11883556 TAATCTCCGCGACACTTCC 59 NA Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 1 4 4 80 3L 11993787 11993866 TTCAAGTTTAACCTGAGCGAG 58 11993727 11993748 CTTCTTGAACTGAATTCCGGAG 59 NA Drosophila melanogaster 61 Sema-5c FBgn0250876 FBtr0300339,FBtr0076052 1 2 2 80 3L 12064091 12064175 GTTGTGGCAAGGTGATATACTC 59 12064032 12064050 TGTCCCTTAGCAACTGACC 59 NA Drosophila melanogaster 61 Hip1 FBgn0036309 FBtr0075948 3 1 2 139 3L 12765678 12766388 AGTTCTACCACCTGAACGTC 59 12765558 12765576 CCGGGAGATGATCATCCAG 59 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 3 2 3 83 3L 12838945 12840160 AATTAGCCACGGAACTTCGA 59 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 CG10732 FBgn0036365 FBtr0075851 2 1 2 89 3L 13436080 13436410 ACTCTGAATGATCTCCTCCA 57 13436462 13436480 CCTGTGATCCTTGCTAGAC 57 NA Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 1 5 5 119 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 CG17689 FBgn0036374 FBtr0075812 1 1 2 145 3L 13499663 13499750 CAATACTGCAAACGCAGCT 59 13499859 13499877 AGGATTCGGATGTATGGCC 59 NA Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619 2 1 2 162 3L 14592037 14593038 AAAGGACAGATGACCGATCC 59 14591894 14591912 AGTTAAAGGCGGAATTGGC 58 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075541 1 1 3 110 3L 15806427 15806446 ATTCCGCCCATTATTCTGTG 58 15805988 15806354 TCGAGAAGCTTTCTTGCCT 59 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0100528,FBtr0075539,FBtr0075538 2 3 4 84 3L 15815228 15815246 TACTGTATCCTCGAAGCGT 57 15815103 15815181 GCTGACAATCTTCTCATTGC 57 NA Drosophila melanogaster 61 MED10 FBgn0036581 FBtr0301481 2 1 1 102 3L 16225352 16225370 GAATGTTCGTCAGATCCGC 59 16225492 16225510 GATCTCTTGTAGGCCGGTC 59 NA DesignNoJunction Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 3 4 4 81 3L 16398479 16398498 CGAGCAGGAGAAATCAAACG 59 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 tra FBgn0003741 FBtr0100244 3 1 2 69 3L 16584019 16584111 GCATCGAGTGTCATATTGTG 57 16583969 16583987 CTTTCTCTGTCTGGTCGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG13029 FBgn0036670 FBtr0075335,FBtr0075336 1 2 2 68 3L 16854313 16854331 CATCTTCACTGCGACTTGC 59 16854420 16854439 TGCATGTAAACTGTGAACCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 3 10 12 135 3L 16914143 16914290 TGCAATAAGGTCATCACCTC 57 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 3 5 7 81 3L 16952971 16954604 TCAGGAGCTACCAGATTCG 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 3 5 7 81 3L 16952971 16954604 TCAGGAGCTACCAGATTCG 58 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299646 3 1 7 91 3L 17535058 17536616 CGCATATTCAATGAAGACACC 57 17536669 17536687 TTGTCTTCCTCGGAATTGC 58 NA Drosophila melanogaster 61 CycT FBgn0025455 FBtr0075205 2 1 2 105 3L 17549672 17549690 GTTCAACGAGAACGTGCTC 59 17549509 17549603 ATCCTTGCATGCTTTGACC 58 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151 2 1 4 181 3L 17952716 17954118 CTATCACAATGCGCCTGTG 59 17952553 17952571 TGAACTCACAGGTCTCGAG 58 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075148 2 1 4 162 3L 17986084 18051345 CTGATCTAGAATTCGATGGCAC 59 17962543 17962561 CACTGCTGATTCTTGGTGC 59 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 1 2 3 80 3L 18874345 18880172 CCATTGCTAGAGGGTCCAG 59 18874283 18874302 GATGTAGGACACGAACTTGC 59 NA Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 1 2 2 80 3L 19272149 19272169 CGTGCTGGTAATGTTTATCGA 58 19272210 19272499 CGCTGGTAATTATCCTCTGC 58 NA Drosophila melanogaster 61 wnd FBgn0036896 FBtr0302513,FBtr0074963,FBtr0074965,FBtr0074964 1 4 4 109 3L 19620619 19620638 GTGTACGAGGATAAGTTGCA 57 19620470 19620547 AGTTTCCGTTCTCGTTCTG 57 NA Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 1 2 2 84 3L 19678980 19679065 GAAGTCGGTGAAACAGTGTC 59 19678915 19678933 CATCAGTGTCCTCAATCGC 58 NA Drosophila melanogaster 61 verm FBgn0261341 FBtr0302333,FBtr0074954,FBtr0302335,FBtr0302334,FBtr0074957,FBtr0074956 3 6 6 145 3L 19685020 19685038 ATCCTGAAGACGGATGAGC 59 19684741 19684911 GGATCCTCATCGACAGAGC 59 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301605,FBtr0301604,FBtr0301606,FBtr0301607 2 5 5 80 3L 19795876 19795894 ATAAGCTCATTTGGACGGG 57 19795938 19796013 AACCAAGAAGAACTGGGTC 57 NA Drosophila melanogaster 61 Rpn1 FBgn0028695 FBtr0074893 1 1 1 90 3L 19910148 19910166 CACTACGAGACGTCCAGTG 59 19910287 19910307 CCTTCTCTTTCTCCTTCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 3 5 5 147 3L 20381809 20381827 CAAGCTGGTCTACTTCGAG 57 20381938 20383024 ATTGTCCATCTGTAGGTGC 57 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 2 18 18 120 3L 20826864 20826883 GTAGCAGCGATTACTTTGGC 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 3 18 18 120 3L 20826865 20826883 TAGCAGCGATTACTTTGGC 58 20826967 20827117 CAACACGCGTTCAAATCTC 58 NA Drosophila melanogaster 61 Rab26 FBgn0086913 FBtr0112677 1 1 3 90 3L 21313650 21313668 AAAGACCTCCTTCCTGGTC 58 21313722 21325711 CACTTTGTTCGTAAGCGCA 59 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 3 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518808 21519094 GGCTCTAGGTCCTTAAGGTC 59 NA Drosophila melanogaster 61 CG7139 FBgn0027532 FBtr0078486 2 1 2 117 3L 22063958 22063976 CAAGTCTGCCAGCAAACTG 59 22063254 22063882 CTTCATTAACTGAATGAGCTCTCC 59 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 1 2 3 170 3L 22262797 22262815 TACTTCGTGGTCACTTCAC 57 22263010 22264666 AACGTCCTCATTCAGATGTG 58 NA Drosophila melanogaster 61 Csp FBgn0004179 FBtr0078495,FBtr0078493 2 2 3 171 3L 22262797 22262816 TACTTCGTGGTCACTTCACC 59 22263010 22264667 CAACGTCCTCATTCAGATGTG 59 NA Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 2 1 1 103 3L 22680160 22680178 TAAGGAGGTCATCCGAAGC 58 22680010 22680028 CAATGCTCGTGAGGATGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 1 1 1 60 3L 20446591 20446615 CTGGAGACACTTAGAAATATTCTGG 59 20447018 20447036 AGATTGTATCCCAGGCTCC 58 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0300790 1 1 21 161 3R 114889 120852 ACAAAGAAGCGCTGTAGGA 59 120977 120995 TCTTGCCTCATCTTCTCGC 59 NA Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078953 1 2 4 80 3R 163313 163332 AAATATGAGCAGTCGCAAGC 59 163047 163272 TTATTAGTCGAGCGCTTTCTG 58 NA InUTR Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078952,FBtr0111207,FBtr0078953 3 4 4 88 3R 161660 161741 GTTTGACTCGCATGTTGCA 59 161590 161611 CTGTTGGTGTTAGACTATTGCA 58 NA InUTR Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078952,FBtr0111207,FBtr0078953 2 3 4 80 3R 162127 162205 CTGGCCCAGACTAGTATCC 58 162065 162087 CAGGTCAAGATATTGTAATCGGG 59 NA Drosophila melanogaster 61 Spargel FBgn0037248 FBtr0078946 2 1 2 156 3R 252616 252635 TCTGAGCCGATATTCTGGTC 59 252356 252447 GAAAGTCGTTGTAAATCAGCAG 58 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 2 2 4 80 3R 271102 271123 TTGGCTAACTGGACATTATAGC 58 270274 271062 GCATGAACCATCCTTAACGT 58 NA Drosophila melanogaster 61 CG31522 FBgn0051522 FBtr0078941,FBtr0078939 3 2 4 81 3R 271102 271124 GTTGGCTAACTGGACATTATAGC 59 270274 271062 GCATGAACCATCCTTAACGT 58 NA Drosophila melanogaster 61 CG31523 FBgn0051523 FBtr0078938,FBtr0078935,FBtr0078936,FBtr0078937 1 4 4 88 3R 293415 293433 TCTACTACATGATCGCCGC 59 293286 293366 GAATTGAACCATTTGGAAGGTG 58 NA Drosophila melanogaster 61 CG31531 FBgn0051531 FBtr0078862,FBtr0078863,FBtr0078864 3 3 3 96 3R 525964 525982 ACGACCTGAGTGATTTGGG 59 526042 526890 GCATGGTCGCTCATAACAC 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 2 10 10 91 3R 561270 561374 GATCTGCATGTGAAATACGAG 57 561199 561217 ATCATCTGCTTTCGCTCTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078818 1 1 19 80 3R 1120590 1121371 CAAAGACCGCTATTGTTTGTC 58 1120530 1120550 CTGTCTACGGTAACGTTTGAC 59 NA Drosophila melanogaster 61 plx FBgn0261261 FBtr0302091 3 1 3 84 3R 1513077 1522753 GAGAGCTACACGAAGTTGTC 58 1522800 1522818 GATGACTGAACTGCAGCTC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 2 8 8 159 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612119 1612137 CGTTGAAGAAGGTGGTTCC 58 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 3 5 5 156 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684160 1684178 CATCACCGAAGCACAATCG 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 1 4 4 80 3R 2182251 2182269 TGGTTCGACAACACTACCA 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 1 6 11 80 3R 2724256 2734248 TGGTAAGTGTCAAGAACGC 58 2724194 2724214 AAGTGAAACTCCTTCTCTAGC 57 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081551 1 1 2 144 3R 3346299 3346903 AAGAAGATATGATGAAGACCGC 58 3346114 3346132 GGAATGAAAGGTGTGCCAG 59 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876 2 2 4 72 3R 4612636 4616240 GGATGTCAAGATAACCCAACTC 58 4612585 4612603 GAGCGCTGATTTATGTGCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 neur FBgn0002932 FBtr0082001,FBtr0082002,FBtr0082004,FBtr0082003,FBtr0300414 2 5 5 227 3R 4847923 4847941 ATATAAACGGCCAACTCGC 58 4847652 4847670 CGATGGGATTCTCGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 pum FBgn0003165 FBtr0081991,FBtr0081992,FBtr0081990 1 3 5 124 3R 5057888 5057906 TATGTCTACATGGGTGGCC 58 5044472 5057800 GTGGATGTGGTAATCGCTG 58 NA Drosophila melanogaster 61 RpL34b FBgn0037686 FBtr0082050,FBtr0082049 3 2 2 101 3R 5226712 5226730 AAATGGTCCAACGTCTGAC 58 5226566 5226584 ACTGGTAAACCAGACGACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 1 3 5 81 3R 5701880 5701898 GATGTCGTCAAACACGACG 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 hth FBgn0001235 FBtr0301956,FBtr0301345,FBtr0082256 3 3 8 106 3R 6359726 6387643 ACATCAGACCCTGATGGAC 58 6359638 6359656 CTACCGAGGAAGACTGAGG 58 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 2 2 2 80 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515482 6515978 CCAGAATTTGGCATCTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 3 4 4 87 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525811 6525958 CTCGTTCAGATCGTTTATCTTATCG 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 3 3 5 86 3R 7048443 7049127 CAAGAACTGGTACAAGAGCA 57 7049176 7049194 TTCTCGATGCTCTTCTTGC 58 NA Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100465 3 1 4 221 3R 7388842 7388863 CACTAAATGCTCTGATAACCTG 57 7386748 7386766 GTGATGCAGATCTCGATGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(3)neo38 FBgn0086910 FBtr0082533,FBtr0110877,FBtr0110876 2 3 3 95 3R 7595816 7596884 GGGAAGAAGTCCTCAACCA 59 7595739 7595757 GGTGTGACGAGTAGTCCAC 59 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301722 2 2 3 98 3R 7867603 7867621 TTCAGTGGCGGAAGTAGTG 59 7867682 7867755 TAAGGCTTCACCAGTACCTG 59 NA Drosophila melanogaster 61 CG12360 FBgn0038111 FBtr0082718,FBtr0082717 3 2 3 80 3R 8853861 8853940 ATGACGTCTCTTATGTCATTCG 58 8853802 8853820 TAAGGATGTGTATGCGCGA 59 NA Drosophila melanogaster 61 CG9813 FBgn0038143 FBtr0082765,FBtr0082769,FBtr0082766,FBtr0082768 3 4 6 155 3R 9203380 9203627 AAAGATAACGGCCAAGAACG 59 9200492 9203262 TCCCGAGTGATCACTTTCC 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0082802,FBtr0082801,FBtr0082806 3 3 8 93 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488768 9491187 AATCCTTGAGATCCTGCCA 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302146,FBtr0083033,FBtr0302142,FBtr0302145,FBtr0083031,FBtr0083034,FBtr0302144,FBtr0083032 1 8 10 94 3R 11004067 11004087 CTCTGGCTACAGATATCTGCC 59 11002147 11004011 TAGCTGGAATTGTTCGGCT 59 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089957,FBtr0089967,FBtr0089958,FBtr0089964,FBtr0089959,FBtr0089965,FBtr0301959 2 7 13 147 3R 11122419 11125005 AAATACGATGAGGTTGCCC 57 11126515 11126533 AGACTTCCAGGGACTTCAG 58 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405,FBtr0083081 3 2 2 146 3R 11143152 11143226 ATCGAGTGGATTACCTGGA 57 11143336 11143354 GGCTGTTGATGTAGTAGCA 57 NA Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 3 3 3 81 3R 11740155 11740174 TGGATAAACTGACCAACGAG 57 11737878 11740113 GCAGATATTTCCTCTTTGTGC 57 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083352,FBtr0083347,FBtr0083349 1 3 6 68 3R 12558424 12558442 GTGTCCTGAAGATCCGACC 59 12484750 12484768 TAGCGGGTGTATGTCTGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853 2 1 4 80 3R 13044912 13044933 ATGAGTATCTTATGGGTTCTCG 57 13044797 13044872 AGTTACCCGATACAAAGCTG 57 NA Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 2 2 2 89 3R 13362402 13362420 AGACAACTCGAGCTGTCAG 59 13362545 13362563 CGTCTTTCCCGAGATTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 1 6 6 147 3R 13502467 13502572 GTCAACAGCTTACGACCCT 59 13502338 13502356 TTCTTCTGCTGGGTCTCTG 59 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 2 4 4 107 3R 13533849 13533867 CTCAATATTCGCCGTACCC 58 13533696 13533778 GATTCGGTTCGGGATACTG 57 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 2 4 4 80 3R 13678782 13678802 ATCTGCAGATTGTCCTTTCTG 58 13678843 13683518 AGTTGCCGACCTTAAATACG 58 NA Drosophila melanogaster 61 Rpb4 FBgn0053520 FBtr0100275,FBtr0083603 1 2 6 110 3R 14080951 14081049 GTTTCCCAAAGTGGCACTC 59 14080859 14080879 TGTTCATTCTGATGTGCATGG 59 NA Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 2 2 2 169 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115416 14115492 ACCAATTCGTTCTCCTGCA 59 NA Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 1 5 6 80 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229686 ACATCGCGTATCTTGACAC 58 NA Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 2 2 2 80 3R 14416080 14416100 CCAGAAGTACAGGATCCTTCC 59 14416140 14416253 CAGGAATTCGTCTTCTTCAGC 59 NA Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 2 2 2 80 3R 14419757 14419829 GGGACCAAATAAACATCCAGG 59 14419697 14419715 CTGGTTTGAGGGATCTCCG 59 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301692 3 1 3 83 3R 15060042 15060061 GTGAAACTTTGGTGACCACC 59 15059900 15059996 CATTCTCCAGGGACAAGGG 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 1 3 3 80 3R 15229531 15229621 CCAGCATCTTTCACTTGAACC 59 15229663 15229681 TCACTTCCACAACGTTCCT 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110919 2 1 8 82 3R 15419811 15420233 CACTTGAATGAGAACTCAAGTG 57 15420276 15420294 GAGTCCTCCAGATCATCGT 58 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 1 4 4 80 3R 15444448 15444530 CATGAACACAGAGCTTAACTG 57 15444388 15444407 ACGGAGCCAATAAAGAACAG 58 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400 1 1 2 97 3R 15476814 15476995 GAATTCTGACTGCTATCCGG 58 15477053 15477073 CATACTCCCTCATCAAAGTCC 58 NA Drosophila melanogaster 61 CG5060 FBgn0038780 FBtr0113251,FBtr0083871 1 2 2 80 3R 16114817 16114835 TATACGGATGTGTTGCACC 57 16114879 16114965 GGCATCCAGCGTAATATCC 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299772,FBtr0299771 1 2 8 80 3R 16576465 16580694 CGCTATGCTCATTCGATGG 59 16580736 16580756 GTCCGATAGTCGATAATGGTG 58 NA Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299767 1 6 8 98 3R 16575988 16576006 AAACTGGCCGGAGTTATCC 59 16576066 16578077 TATGATGCTTCGCAACAATCG 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 3 4 4 86 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404213 17404292 GGCTGTCGAACTGATAATAGC 59 NA Drosophila melanogaster 61 how FBgn0017397 FBtr0084177,FBtr0301401 2 2 5 120 3R 17897747 17900174 ATATGCTGATCATAGCGTAGG 57 17900256 17900274 TATCTCAATGAAACCCGCC 57 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 3 2 3 83 3R 18209068 18209140 TTATGCAACACGAATTTCCG 57 18209185 18209204 GTGCCTCTATCATCAGTTCC 57 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 1 3 3 92 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380607 18380627 CAGAACAAACGCCAGATAGAC 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302187 1 1 5 190 3R 18431113 18431131 CAAGATGCTGGCTGATCAG 58 18431285 18432560 CATCGAACCATCTGTTCGT 58 NA Drosophila melanogaster 61 CG7029 FBgn0039026 FBtr0084312,FBtr0113270,FBtr0113271,FBtr0113269 3 4 4 80 3R 18614231 18614310 GTTTCTATGCGGATCCCAG 58 18614353 18614372 CTATGTCCTCCAGATTGCTG 57 NA InUTR Drosophila melanogaster 61 cenB1A FBgn0039056 FBtr0084368,FBtr0084369 1 2 3 80 3R 18949093 18949168 GCAGACATTGTAACGCTACTC 59 18949208 18949228 CTCATCTTCGCCATTGTACTC 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392,FBtr0084393 1 2 7 81 3R 19017472 19017490 ATTAACCAGACGGATGGCT 58 19014843 19017430 GACAGAAGCTCTCATTCATGTC 59 NA Drosophila melanogaster 61 CG4467 FBgn0039064 FBtr0084390 1 1 2 96 3R 19062429 19062894 GTGCATTTCTATCCGGTGG 58 19062351 19062369 ATTCCGGCCACAAGTAGAG 59 NA Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 2 3 3 83 3R 19349551 19349633 CTGTTCATAAGAAGACTTCGCA 58 19349489 19349507 CAAATCTTGCGGAACCAGG 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0084480,FBtr0084479,FBtr0290056 3 3 4 144 3R 19432766 19433259 TCAAGCTGCTAGACTTCCA 58 19432640 19432658 ATGCTTTGCAGGATGATGC 59 NA Drosophila melanogaster 61 CG31145 FBgn0051145 FBtr0290056,FBtr0290057 3 2 4 180 3R 19457898 19458234 GGACGAGTGTTAAGTCAGG 57 19457736 19457754 TTACCAATCCCGTCATCCT 58 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 3 3 5 139 3R 19838947 19839031 AGAGATGGCAATAGACTGGT 58 19838827 19838846 TCGATGATCATGTCCATCGA 58 NA Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084794 2 2 3 144 3R 20864227 20864382 AAACACAGCTAAATCGGTCG 59 20864000 20864018 GTTGAACGGCGGATATTGG 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 1 3 3 60 3R 20877256 20877276 ACATCTACAATTGCCTGAGTC 58 20878221 20878242 CCCTTAAAGCTGCTCTTATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG11836 FBgn0039272 FBtr0113284,FBtr0302406,FBtr0302405,FBtr0084767,FBtr0302407,FBtr0302404,FBtr0084768 2 7 7 146 3R 20897978 20898055 AAGTTAAGGTGCCAATCATGTC 59 20898162 20898180 CATTGGATAGCAACAGCGG 59 NA Drosophila melanogaster 61 CG10669 FBgn0039329 FBtr0084848,FBtr0300687 2 2 2 80 3R 21160215 21160238 CAGATATGTCACCAATCTGTATCG 59 21160103 21160179 TCTTCTTCATAATCCTCTCCGT 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089983 3 1 6 123 3R 21182041 21182059 ATGACAACTCTCGTTCCGG 59 21181791 21181954 AGAGCATGGCCCATATAGC 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 2 2 7 160 3R 21539673 21544127 CGGATTGGAATCAACTTGC 57 21539346 21539366 TACACATGAACATCAAGGAGG 57 NA Drosophila melanogaster 61 CG31380 FBgn0051380 FBtr0084918 3 1 1 83 3R 21614184 21614202 TTTCACCTGGAGTCAGAGC 59 21613995 21614013 TTCATCGGTGTTTAGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17370 FBgn0039381 FBtr0300820,FBtr0300819 2 2 5 145 3R 21711423 21711441 TGCTGCTGATAGTCTACGG 59 21711547 21711618 CGCTGTGAAATACAGATTTGGT 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290139 1 1 5 80 3R 21735837 21735856 ATTTCGGGAGCTATTTCGTG 58 21735897 21742831 TTCGAAGTACTCATAGGTGGA 58 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 3 4 5 132 3R 21870339 21871200 GATCATTGGGCAACAGATCC 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 gro FBgn0001139 FBtr0084965,FBtr0084962,FBtr0084964,FBtr0084963 2 4 5 131 3R 21870340 21871201 ATCATTGGGCAACAGATCCA 59 21871295 21871313 TTTGTTCAGCAGACCTTGC 59 NA Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084977 2 1 2 80 3R 21877632 21877709 CAAGGAGATATCACATCTCGAG 58 21877573 21877591 ATGGTGGCCAGAATATTGC 58 NA Drosophila melanogaster 61 Ald FBgn0000064 FBtr0085001 3 1 6 83 3R 22086928 22086947 CATTTCTCTGGGTGTTTCGT 58 22083752 22086885 TCGAGTGTAGTTTCACTAACAC 58 NA InUTR Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302101,FBtr0302098,FBtr0302096,FBtr0302102,FBtr0302099,FBtr0302097,FBtr0302100,FBtr0302103,FBtr0302095 3 10 10 97 3R 22380649 22380960 ATACGCTAGGAAACTGCGA 58 22381020 22381039 GTTCAACTTGGTCATTTGGC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302101,FBtr0302100 2 2 10 86 3R 22416432 22424309 GACATGAGTGCTGAGAAGC 58 22424359 22424377 GATCACATCTTGTGCCTCC 58 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106,FBtr0085107 1 2 2 82 3R 22938386 22938404 AATAGTGATGCGGTCACCA 59 22938590 22938608 TCCTTGGACTGCTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 larp FBgn0260724 FBtr0301180 2 1 4 196 3R 24159595 24159613 AAAGTACACAAGGATCGCA 57 24151528 24159435 TGTTTGGCCGATATCTTCC 57 NA Drosophila melanogaster 61 Dhc98D FBgn0013813 FBtr0301303 1 1 2 92 3R 24313704 24313722 CAGATGCCGAGGTAGAAGG 59 24313777 24314482 ATTTGCTTCGTCTGGATCGA 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0085348 3 2 4 87 3R 24698298 24698316 TCGATTCTGACCTTCCTGC 59 24698011 24698247 CGTCAACTTCAACCTGCAG 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299744 1 1 13 115 3R 24720769 24726551 CGACGTGTGAGTATAATTTCGA 58 24726627 24726645 GTAGCGGTATTTGTGCTGC 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299745,FBtr0299750,FBtr0299742,FBtr0299749 3 4 13 136 3R 24714129 24714147 CGCTAACGCAACTCTTGAG 59 24714246 24715496 TCTGGGCATCTCTTTCTTCG 59 NA Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085379,FBtr0085374,FBtr0085378,FBtr0085381,FBtr0085376 1 5 10 116 3R 24959140 24960777 TTTGAAGCTTGGCTTCGTG 59 24960857 24960875 GTCTCAATCATCGCCTGTC 58 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0085424,FBtr0085422,FBtr0110981 2 3 5 104 3R 25309372 25309391 AATTTGAACCTGCTGAAGCG 59 25309458 25309689 TAGAGGAGCGACATTGCTG 59 NA Drosophila melanogaster 61 alph FBgn0086361 FBtr0085446,FBtr0085442,FBtr0085445 2 3 5 84 3R 25423049 25423067 GGAGGAGGTCTACAGTCCA 59 25423187 25423895 GCGTTGGACTTTCACATGG 59 NA Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 3 4 4 166 3R 25617433 25617517 ACCGATACTTCAAGTGCCC 59 25617647 25617665 TTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG34133 FBgn0083969 FBtr0110888 3 1 2 80 3R 25695768 25696973 ATAGGACCTAATAGCTCAACGG 59 25697012 25697032 CATCGCATCTGTCTCAATGAC 59 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 3 4 5 84 3R 25857054 25857152 GAGCCATCTACAGATTCTTGC 58 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 3 2 2 80 3R 25994096 25994173 ATTACATCCATAGGACACCCG 59 25994036 25994059 AAGGATTCCAGTGACCATATAGAG 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 2 2 4 106 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26275585 26275603 TGGTCATATAGTGCTCGCC 59 NA Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 3 5 5 83 3R 26289003 26289023 CATCTGCTCTATGACATCTCC 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 2 8 13 153 3R 26420665 26420683 GATTGTAGCTCGCAATCCG 59 26419562 26420549 AGTAGAGTTTCTGGTCGGTG 59 NA Drosophila melanogaster 61 CG1746 FBgn0039830 FBtr0085773,FBtr0085774,FBtr0085772 3 3 3 84 3R 27044693 27044711 TGTTCGTGTCGACAGTCTC 59 27043629 27043648 CTCAATGGTCGCAAGTACTG 59 NA DesignNoJunction Drosophila melanogaster 61 Ef1alpha100E FBgn0000557 FBtr0085834,FBtr0085835,FBtr0085833,FBtr0085832 1 4 4 114 3R 27567454 27567472 TCAACGTGAAGAACGTGTC 58 27567550 27567645 TTGAGCACAATCACCTGAG 57 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 iab-4 FBgn0020546 FBtr0083363,FBtr0083362 2 2 2 163 3R 12677051 12677070 TTTCCTATCGCCACTCACTG 59 12677196 12681548 ATGGATGTCCTTGGTCCAG 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0112657 3 1 10 128 4 113785 113804 TGTTTAAAGAGCGCCTATGC 59 113895 115062 TTGCTTCCAGGTTCATGTG 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 1 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103362 106347 CGAGTTAAGCCCATCTTAGGA 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 RhoGAP102A FBgn0259216 FBtr0299723 3 1 2 80 4 282673 283016 CCATTAATGTAGTAAGTCGCAGAG 59 283055 283073 GTCCTGGACGACTTATCCA 58 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 1 5 6 198 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322903 322924 CAACTGAAGAAATGATTTGCGG 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 3 4 4 82 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383643 TTGTAGAACTGTGCAACGAG 58 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344 2 2 3 80 4 493297 493786 AGATCTTACACCAGGCTTACG 59 493237 493257 TTAAGTGGCAATTGTGTTGGG 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089993 2 2 4 109 4 585193 585211 GCCTAGATCTCAAATCGCT 57 585284 586046 CTCCTTTAAACCTGCCTCC 57 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089994,FBtr0089996 3 2 4 108 4 585199 585218 ATCTCAAATCGCTTTACCGG 58 585286 586054 CGGTAAATCTCCTTTAAACCCT 58 NA Drosophila melanogaster 61 myoglianin FBgn0026199 FBtr0089093,FBtr0089092,FBtr0089095,FBtr0089094 3 4 4 80 4 714052 714070 ACCAACGATGAGGAGTACG 59 713453 714011 AACATGAGGTTGAATTTCCTCG 59 NA Drosophila melanogaster 61 plexA FBgn0025741 FBtr0100296 2 1 5 162 4 1043003 1043021 AGAAGGGAATACACCAACG 57 1036238 1042878 TTCTCCACTCGTTAGAACAC 57 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 2 9 9 80 4 1068496 1068516 AGGATATCTGTCTCCTGAGGT 59 1068343 1068457 TAAAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300378,FBtr0100146 2 2 9 141 4 1059053 1060649 GTGCTCTTCAGCTAGACGA 59 1058312 1058330 AAGGTTACCCAGTGCTTCC 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0070101,FBtr0070102 1 2 4 61 X 227605 227625 GATCAGGAAGCTATCCATCAC 58 211928 211946 ATCACCATGTCGCTTTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 vnd FBgn0003986 FBtr0070110 3 1 2 157 X 485841 485859 TCTTATGCTTCCATCGTCG 57 485980 487694 TTGCATCGAATAAGCCAGG 58 NA Drosophila melanogaster 61 CG17829 FBgn0025635 FBtr0070118,FBtr0070117,FBtr0070116 1 3 3 97 X 520388 520548 AAACAACACAAACAGCTTCC 57 520608 520626 TGTAGCAGTTAACGTGTCG 57 NA Nonspecific Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515,FBtr0300224 2 2 2 96 X 1347989 1348057 TCTCTATACGATCGTGGGAG 58 1348116 1348134 CTGTCCGTTGGAATCACTG 58 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 1 9 9 88 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530050 1530143 TATCTGAGCCAGATGGCTG 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 boi FBgn0040388 FBtr0114528,FBtr0070457 2 2 3 135 X 2341620 2344710 GTTTAAGGCGAGCATGGTG 59 2341503 2341521 CAACATGCGATACTGCACC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0091966,FBtr0091962,FBtr0091963,FBtr0091964 2 4 8 80 X 2386427 2386445 AGTAATGATCGCAGACCGA 58 2384862 2386384 TCCAACGTCGTTATTCTCCT 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070517,FBtr0070520,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070521,FBtr0070515,FBtr0070518,FBtr0070519,FBtr0070522,FBtr0070511 1 12 12 80 X 3228355 3228597 GTCGCTTAAGTTCAAACGCA 59 3228639 3228658 TCGGAAATCTGATTTCCCGA 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 3 1 1 70 X 4275984 4276002 AGACCAAGAAGATCCAAGC 57 4277106 4277124 CGGAGTGTCCTCTAAGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12179 FBgn0025388 FBtr0300755,FBtr0300754 2 2 2 176 X 4528057 4528078 ATCTAGGAATCGATTTGCTGTG 58 4527849 4527920 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 2 3 3 81 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309886 5309905 AATATGCGACCCAGATAGCA 59 NA Drosophila melanogaster 61 CG4096 FBgn0029791 FBtr0301083 2 1 2 101 X 5601441 5601460 GACACGATAATCGCCAACTG 59 5601523 5601598 ACCAACTTTCTTGCAGATGC 59 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 2 2 2 83 X 6662297 6662317 TTCAAGATGTGGACATGATCG 58 6662362 6662448 CCAATTTAGGCGCCTTCAG 59 NA Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035 1 1 2 116 X 6886907 6887222 CTTCACAGTGGTACGTGAC 58 6886809 6886827 CACTGGTAGTATGCATGCC 58 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 1 2 2 60 X 6964928 6964948 GGAAATCCCTCAGATACTTCC 57 6965437 6965456 AATTCCGGTACGTAGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 sws FBgn0003656 FBtr0071125 3 1 3 88 X 7852512 7854043 TGAATAATCTGCCAGCCGA 59 7852442 7852460 CAGGTCAGTGTCATCCTGG 59 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0301675 2 1 3 157 X 7853123 7855223 CATTCACACCAATGGCCAC 59 7852489 7852510 CAGCTCCAAGATTATGCATCAC 59 NA Drosophila melanogaster 61 Gclc FBgn0040319 FBtr0071108,FBtr0071107 2 2 2 105 X 7997895 7997916 ACAGTATCTTCGCTTTATCCAG 58 7997745 7997830 GGAATCCTGCTTGTAATCCG 58 NA Drosophila melanogaster 61 ND75 FBgn0017566 FBtr0071180,FBtr0071181 3 2 2 283 X 8143669 8143747 CTGAAGAAGCCGAACTGGA 59 8143404 8143422 GTGTTCACGTAGATGCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0071209,FBtr0301762,FBtr0301764,FBtr0071207 1 4 6 80 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442549 8444124 CATTCATGCCTGTATCGCC 59 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0071297 2 2 6 135 X 9006260 9006790 GCATTTCAAGAAGGATAGCGG 59 9007761 9007780 TATCTTCACCTGCAGGAACG 59 NA Drosophila melanogaster 61 CG17754 FBgn0030114 FBtr0071314,FBtr0071316,FBtr0071315 2 3 3 81 X 9148002 9148020 CCAGCAATCCAATGGTCTG 58 9148065 9148156 AGTGAGCAGATCAGAGTCC 58 NA Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367 3 1 2 145 X 9502315 9502464 AGACCAAACTTGAGCTAAAGC 58 9502190 9502208 TTCATTCGGCGAGATCTCC 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0071402,FBtr0302723 2 2 3 80 X 9575212 9575314 GCAAATGACTCAACTCAACAG 58 9575152 9575171 TGTTGCTGAGGATTGTTACC 58 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584 3 1 4 80 X 10120617 10120635 CGGATCTGAATGTTTCGCT 58 10120679 10121390 CTAAGGTGTCTGTTTCCCG 57 NA Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 3 3 3 82 X 10373677 10373695 CCTGAAGTACTTGTTCCGC 58 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0112978 1 1 2 182 X 10812541 10813876 GTACCAGCAGGTAACCCAG 59 10814022 10814040 TAGTGTCCCTGCATCAAGC 59 NA Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0300732,FBtr0300733 1 2 4 85 X 11331114 11331132 CATACTTGGAGGTCTCGCA 59 11330421 11331068 GGAGTTATTATTCTCCTGCAGC 59 NA Drosophila melanogaster 61 rho-4 FBgn0030318 FBtr0073518,FBtr0073519 2 2 3 81 X 11494346 11498352 AGATATTTGACAAGCACGACTC 58 11498393 11498412 CAATAGCCATCCGAGATCAG 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 1 2 4 163 X 11567984 11568086 CCATACAAATCCCAGCTCG 58 11568213 11568231 GCTGTAGCGTATTGTAGCC 58 NA Drosophila melanogaster 61 pot FBgn0250871 FBtr0073594,FBtr0073595 2 2 2 81 X 11805153 11805173 AGATCATCACGATAGTCTGCC 59 11805037 11805110 ATCGGGTTCAGGATTGGAG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0100305,FBtr0100304 3 2 10 88 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848303 11856054 GATTGAGTTCGAATCGTGCC 59 NA Drosophila melanogaster 61 CG15734 FBgn0030374 FBtr0300834,FBtr0300835 2 2 2 81 X 11980916 11980934 ACACCTATCAAGTTTGGCG 58 11980785 11980872 TTATGCAACGACTTATCGGG 58 NA Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736 3 1 4 83 X 13094934 13097760 TGAATAACATGGTAACGGTGAG 58 13094872 13094890 CGACTCCGCCAATATTTCC 58 NA Drosophila melanogaster 61 CG1998 FBgn0030485 FBtr0073787,FBtr0301560 2 2 2 87 X 13304291 13304383 CTGCTAAAGGTGATCTGGTG 58 13304223 13304243 GGATCTCCATTAGTCGATAGC 57 NA Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 1 2 2 80 X 13608753 13608860 TGTCAGATTACTCAAGCGAC 57 13608902 13608921 GATCGGATGTCGTTATCGAG 58 NA Drosophila melanogaster 61 CG10990 FBgn0030520 FBtr0112981,FBtr0073840 3 2 2 91 X 13644350 13644368 ATAAACAATGTGCCATCGC 57 13640810 13640828 TAATCACGCATGGTGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Ste:CG33245 FBgn0053245 FBtr0300094 3 1 1 60 X 13944002 13944020 AGTGAACTGGCAACATGTC 58 13943903 13943921 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 1 8 8 128 X 14825231 14825249 GCAGATCGAGATTGAGTCG 58 14825341 14825846 ATGGTCTGACATTGCTTGG 58 NA Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 2 2 2 90 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403813 15403832 TTGTCAATCTTGTCCGTCTG 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 1 6 6 80 X 15722902 15722992 GTACAAGGGAAATAATCGCTGG 59 15722843 15722861 GCGTACTCCATAGCATCCT 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 3 5 5 81 X 15749871 15749891 TCTATAATCGCGTTGGAATGG 58 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 2 3 3 80 X 15858112 15858135 CCAACTTTAATGACTACACCTCAC 59 15857980 15858073 CGAATGTTTCGCCAGTCAG 59 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 2 4 4 80 X 15975870 15975889 CAAATGAACTTTCCGTGTGG 58 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 CG4239 FBgn0030745 FBtr0074270,FBtr0074269,FBtr0074268 3 3 3 125 X 16281541 16281559 TGATAATCATCGGCACGCT 59 16281648 16281727 ATGCCTTGGTGTAGAAGCT 59 NA Drosophila melanogaster 61 CG32573 FBgn0052573 FBtr0302364,FBtr0074315 1 2 2 80 X 16545984 16546007 CTATGTACTATTCCACTCGTTGTG 59 16546045 16546126 TCGCCGTATGGTAATTTGAC 58 NA Nonspecific Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074366 3 1 7 81 X 16588445 16588877 TCGTGTAGGTCAAGTACTTACC 59 16588385 16588405 GCTGCCACATTAAATTGACAC 58 NA InUTR Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033,FBtr0300034,FBtr0300032 1 4 4 80 X 16602455 16602473 TTCTGCCCACAATGAATCC 58 16602515 16602594 GGGCATTATATCTTCCTTGGC 59 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 3 4 4 80 X 16649791 16649880 CTGAAAGTCAGCACTGTGG 58 16649729 16649750 ATTGGTGTTCGAGATAAAGACC 58 NA Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 1 1 1 60 X 17107050 17107069 TCTTTGTCGCAATGATACCA 57 17107265 17107284 CAGGGTGTCTATGAAGTTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 3 1 1 72 X 17107050 17107069 TCTTTGTCGCAATGATACCA 57 17107276 17107296 AGACCATGTATACAGGGTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 2 3 3 168 X 17357767 17357785 CAATGGAACTGCTCGAACC 59 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 2 3 3 80 X 17536257 17536344 TCGAAGAGGATACCAATACTGAG 59 17536199 17536218 AGAAGAAGTCCTTCAGTGCC 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302837 2 1 5 99 X 17614643 17614661 CTGATCAAGACGCTTCCCT 59 17614722 17614990 CCGGGAATATCGAAATCTCCT 59 NA Drosophila melanogaster 61 CG42684 FBgn0261570 FBtr0302835,FBtr0302837 2 2 5 80 X 17615633 17630235 CTCTACAGTGAACTAGGTGAG 57 17630276 17630295 CAGCGATGTATCGTTTAACG 57 NA Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 1 1 1 151 X 17778437 17778455 GAACAGTGAGACGAACGTG 58 17778732 17778752 TCTCCTCGATATCCATGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0112879,FBtr0112878 1 3 9 82 X 18267163 18267181 CAGAAGGTGGTCTACGTGG 59 18267227 18267330 GTTGGAGGGATTTGCACTG 59 NA Drosophila melanogaster 61 CCKLR-17D3 FBgn0030954 FBtr0113003 3 1 1 72 X 18660268 18660287 ATTGATACCCACCAGTCGAC 59 18660153 18660171 GAAGAGCTCGTATCCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 3 2 8 126 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19400566 19400585 TCTGATGATGCTCCTTTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 sw FBgn0003654 FBtr0089409 3 1 13 183 X 20106811 20106886 CAGCAGTTGAGAACTTGGC 59 20106646 20106664 TTGATCTCCTTCTCGCGAC 59 NA InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 1 4 13 133 X 20105880 20105899 TCTACACAAAGCAGACCCAG 59 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 3 4 13 133 X 20105880 20105899 TCTACACAAAGCAGACCCAG 59 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG15456 FBgn0040650 FBtr0077323 1 1 1 99 X 20297992 20298011 AAAGTGGAGGTGGAATACTG 57 20297855 20297873 AGGATATGTCCAAGTCGGG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 RunxB FBgn0259162 FBtr0299604,FBtr0299603 3 2 2 108 X 20412285 20412860 ATCTCCACATGTGGTCTGC 59 20412930 20412950 TATAGTGCCATCCATGACCTC 59 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 2 8 8 97 X 21253984 21254063 ACGATTGTAAAGGCTGCTG 58 21254124 21254142 ATTTCCAGGGTGATACGGG 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 3 4 4 111 X 21313528 21313547 GATTGGTGGGATTAGGAACG 58 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 2 5 5 96 X 21473853 21474022 AATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053 1 1 2 123 X 21485747 21485765 GAACCGCATCTTCGATCAC 59 21484970 21485660 GCTCCATGGATAGGACTCC 59 NA Nonspecific Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 2 9 9 96 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497193 21497211 GTTGTCCACCATGATTCCC 58 NA Drosophila melanogaster 61 CR18166 FBgn0029526 FBtr0070095 1 1 2 91 X 375590 375648 GGAAGTAGGAGTAGGACCCT 59 375518 375536 TCAGAGCTGAGAACCATGG 59 NA Drosophila melanogaster 61 snoRNA:Me28S-A3365 FBgn0086040 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:N5:42Ad FBgn0011934 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-184 FBgn0067726 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:U49:66Db FBgn0060291 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31165 FBgn0051165 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-304 FBgn0067701 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG1678 FBgn0031176 FBtr0077219 2 1 1 79 X 21273594 21273612 GGAATACCTCAGGGACCTC 58 21273533 21273551 GAAGAGTCTTCGGAGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11666 FBgn0040648 FBtr0077240 2 1 1 60 X 20855778 20855798 GATGTGGATAAGGATCTCGAC 57 20855820 20855838 GGTCATGGTTGTACTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab10 FBgn0015789 FBtr0077337 2 1 1 88 X 20123496 20123585 ACGGAATATAGACGAGCACG 59 20123636 20123654 TGTTGACCACCCTCTTGTC 59 NA Drosophila melanogaster 61 CG34331 FBgn0085360 FBtr0301576 2 1 1 60 X 20016605 20016624 CGAATGTTCCCGATATTCCC 58 20016647 20016665 TCCTCTCCGAAATCGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 1 2 2 133 X 19512541 19512559 CTAATCAGCTGTTCCGCTC 58 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ulp1 FBgn0027603 FBtr0074693 3 1 1 98 X 19097930 19097949 TCTAAGGAATGACTTTGCGG 58 19097792 19097869 TCATTAGCCTGCTGTTCAG 57 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074659,FBtr0074656,FBtr0074658,FBtr0074657 3 4 4 60 X 18689040 18689058 GGTCGATGAGTCCTCAGAG 59 18688998 18689017 CTAGTTCTCCTTCGATTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616,FBtr0301545 1 2 2 98 X 18534439 18541236 CTGTAGTGTAACGGTGCAG 58 18534359 18534377 TACTTCTCCTTGCCCAGAG 58 NA Drosophila melanogaster 61 Aats-his FBgn0027087 FBtr0074593,FBtr0074594 3 2 2 94 X 18413273 18413354 ATAAGTTGGATAAGTCGCCCT 59 18413410 18413428 GTACTCGCCAATTCGATCC 58 NA Drosophila melanogaster 61 CG6361 FBgn0030925 FBtr0074630,FBtr0113000 3 2 2 95 X 18374637 18374655 CCTGTCTCTACACGGATCG 59 18374503 18374578 TTGATACGGCACGATTGGT 59 NA Drosophila melanogaster 61 CG6179 FBgn0030915 FBtr0074558 2 1 1 176 X 18274832 18274850 TGATGTGAAGTTCACGCTG 58 18275050 18275068 TTTCTGATCAGCCGTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 2 2 2 142 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208839 18208857 TACACAAAGTCACCCAGCT 58 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 3 2 2 175 X 17983254 17983335 AATACAAGCTCAATCCGCT 57 17983097 17983115 AGGAGACCTGAATGTTGGA 57 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 1 2 2 142 X 17984260 17984357 GTCAAATGGAGTGAGCCAG 58 17984136 17984154 CACTTGATCGACGAGATGC 58 NA Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089659,FBtr0089660,FBtr0089657,FBtr0301955,FBtr0089661,FBtr0089662,FBtr0089663 2 8 8 83 X 17844789 17845234 TAACTGTCAGGTTCCTCGC 59 17844724 17844744 GAATGATGGCGATTATGTCGA 58 NA Drosophila melanogaster 61 Socs16D FBgn0030869 FBtr0074473 2 1 1 80 X 17717270 17717288 AGACGAATGCAATCCAGGA 59 17717145 17717226 CCCAGTACCAGCCATAGTC 59 NA Drosophila melanogaster 61 CG12995 FBgn0030826 FBtr0074402 1 1 1 75 X 17103958 17103978 TGAAACTGATGATCCTTCTGG 57 17103903 17103921 TTGGAGGACACATCATCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8945 FBgn0030815 FBtr0074411 3 1 1 80 X 16978564 16979054 GGAAGATGACTACGACAAATGG 59 16978505 16978523 GAGGTAGTGGAACGACGTC 59 NA Drosophila melanogaster 61 CG4789 FBgn0030792 FBtr0074333 3 1 1 68 X 16695564 16695582 ATCTCTTGGACGAGAAGCG 59 16695614 16695698 CACACTTGTCGGCTATTCC 58 NA DesignRelaxed Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074108,FBtr0074110,FBtr0074109,FBtr0074106,FBtr0074111,FBtr0074107 3 6 6 240 X 15755524 15755615 GCCACCATCTAACAAGAGC 58 15755819 15755837 CTTCCTGCCTGAGACTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8509 FBgn0030696 FBtr0074098 2 1 1 60 X 15704201 15704219 CTGATGCTCTTCAATCGCT 58 15704240 15704261 TCAGTCCATAGGTGCTTATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32588 FBgn0052588 FBtr0074025 2 1 1 119 X 15100114 15100214 CTCCATTGTATTTATCACTCCGC 59 15100017 15100035 AGAGGCATCAATCCACGTC 59 NA Drosophila melanogaster 61 CG32588 FBgn0052588 FBtr0074025 1 1 1 117 X 15100113 15100212 CCATTGTATTTATCACTCCGCA 59 15100017 15100035 AGAGGCATCAATCCACGTC 59 NA Drosophila melanogaster 61 CG12398 FBgn0030596 FBtr0073976 2 1 1 162 X 14807144 14807218 AGATATAGATTTCCTTCGCCAC 57 14807003 14807022 ATCCTTTGTTGGCACTACAG 58 NA Drosophila melanogaster 61 CG11158 FBgn0030511 FBtr0073812 2 1 1 63 X 13577172 13577190 ATGGAACACTGAATGCCCT 59 13577217 13577292 CTAAAGACCGGAACATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0112849 1 3 4 80 X 13093128 13093148 GAGGCTCGAACTCTAGATCAG 59 13092996 13093087 CTGAAAGACACCTTTAGCCG 59 NA Drosophila melanogaster 61 CG12723 FBgn0030459 FBtr0073738 2 1 1 131 X 13085128 13085146 GTACAGCGTCAACTATCCG 58 13084950 13084969 TAGGTCTGCACATAAGTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42629 FBgn0261388 FBtr0302270 3 1 1 80 X 12968592 12968610 ACACATTCCGAGTTCTGCT 59 12968651 12968821 CACATAGTAACCCTGGTATGGA 59 NA Drosophila melanogaster 61 CG4645 FBgn0030435 FBtr0073692 2 1 1 129 X 12805131 12805450 CATTCTCTGGGTGATCAATATCTC 59 12805538 12805556 GAGGAACAGCGAGAATTGC 59 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 1 4 4 81 X 12550119 12550138 TGAACTATTGTCGTAGCCTG 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445,FBtr0113444 2 2 2 82 X 12498605 12498686 TTTCATTCAGCGGGTTTGC 59 12498732 12498750 GACTCGCAAATGAGACACG 59 NA Drosophila melanogaster 61 CG15729 FBgn0030399 FBtr0073664 1 1 1 149 X 12459170 12459188 ATCCCTTAGCCAACATGTC 57 12458716 12459058 CCCGAGGAAGACATATTGTC 57 NA Drosophila melanogaster 61 SelG FBgn0030350 FBtr0073570 2 1 1 80 X 11781434 11781520 TGTACATCGACCATAATGGG 57 11781562 11781581 ATATCCCGACAAATAGCTCC 57 NA Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073617 2 1 5 101 X 11607830 11608515 GACAAGAGCAGTACGTTGAC 59 11607748 11607768 TGGTGTAAGCTACTATACGCC 59 NA InUTR Drosophila melanogaster 61 CG11696 FBgn0030314 FBtr0073512 3 1 1 82 X 11469161 11469181 TGACCATGCATCTTAAAGGAC 58 11469225 11469302 AAACTTGGTGCGGAATGTC 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 1 4 4 160 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444959 11445070 TCAATCCATCTTCTATGCGCT 59 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 3 2 2 89 X 11349145 11349163 GCCGCAAACTATTAATCCG 57 11349216 11349324 TCCAGGAGGTCATTTACGT 58 NA Drosophila melanogaster 61 dsh FBgn0000499 FBtr0073454,FBtr0073455 2 2 2 60 X 11251504 11251523 CGCACGACAGTATTATTGCC 59 11251545 11251564 TTATTCTGGTCCAGACGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17333 FBgn0030239 FBtr0073379 3 1 1 83 X 10742266 10742403 CAGTGTCGTCAAGAGTGTG 58 10742450 10742468 AATGTCAACTGCCCTTTGG 58 NA Nonspecific Drosophila melanogaster 61 Tango5 FBgn0052675 FBtr0071501,FBtr0071499,FBtr0300569,FBtr0071500 2 4 4 80 X 10655534 10655625 ACCGTATCCCGATGATATTATCTG 59 10655477 10655497 ACCTTGGACATAATGGACCAG 59 NA Drosophila melanogaster 61 Psf3 FBgn0030196 FBtr0071465 1 1 1 80 X 10279031 10279051 CATCGAGGACATATTCGTGAC 58 10278903 10278989 GAGTCCAGGAATCCCATCC 59 NA Drosophila melanogaster 61 CG17841 FBgn0028480 FBtr0071444 1 1 1 101 X 10276536 10276626 CTCTCAAGGTCTTTCTACCG 57 10276690 10276708 CATTTATAAGGGCGGTGGG 58 NA Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0112974,FBtr0071487 2 2 2 128 X 10102316 10106193 CACAGGACTATTCTTTGGCT 57 10102207 10102225 TTAAAGTCACTTGCCTCGC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33557 FBgn0053557 FBtr0091534 1 1 1 83 X 9903660 9903679 GCAAGCTTTCAAAGATCGAG 57 9903724 9903800 ATTCAGTGCCTGTTTCTAGG 57 NA Drosophila melanogaster 61 CG3003 FBgn0030144 FBtr0071364 1 1 1 145 X 9506236 9506329 AAAGGTCATTGCCTTCCTG 58 9506438 9506456 CATGGCCCAATCTTTCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34026 FBgn0054026 FBtr0100081 1 1 1 100 X 9427967 9427987 GCAGATGATTACCAATTGGCA 59 9428049 9428128 TTTAGGTTGTCCGACTGCT 59 NA Drosophila melanogaster 61 APC4 FBgn0052707 FBtr0071285,FBtr0301806 2 2 2 80 X 8977448 8977466 GCCTCATTTACGAGGACGA 59 8977506 8977586 ATGTGTAAGTTCCTAGGTTCTCC 59 NA Drosophila melanogaster 61 Rbm13 FBgn0030067 FBtr0071255 2 1 1 125 X 8796836 8797247 GATATTGAGGAGACCAAAGTGC 59 8797333 8797351 ATACTCGTACTCCAGCTGC 59 NA Drosophila melanogaster 61 CG12772 FBgn0030055 FBtr0071221 3 1 1 109 X 8573708 8573727 GTACAAGCACAAGGAACTGG 59 8573798 8573885 TGAAGAATGACTGCTCCCTC 59 NA Drosophila melanogaster 61 CG2258 FBgn0029997 FBtr0071109,FBtr0071111,FBtr0071110 3 3 3 97 X 7991393 7991475 ATCATCAGGATTATTTGGGCG 58 7991316 7991334 CAAGGCAATGACCATGTCC 59 NA Drosophila melanogaster 61 CG42593 FBgn0260970 FBtr0301748 1 1 1 80 X 7834740 7834820 ACAGAATACATTGCATGATCCC 59 7834860 7834879 TAGCAGTGGTCCTTCATCAC 59 NA Drosophila melanogaster 61 CG10777 FBgn0029979 FBtr0071132 2 1 1 107 X 7822581 7822836 CAAGATCAAGGTGGAGGAC 57 7822492 7822511 TCCTTTAGCACTGAATCACG 58 NA Drosophila melanogaster 61 bys FBgn0010292 FBtr0071090 1 1 1 193 X 7796325 7796409 CTTCAGTTTGAATGATGGCCA 59 7796564 7796582 GTATGTCGGCCTCCTTCTC 59 NA Drosophila melanogaster 61 Dok FBgn0029944 FBtr0071049 3 1 1 153 X 7219742 7219760 GGCTACCCTAACACTGAGC 59 7219877 7220138 CAAGCCATCAAAGGAGCTG 59 NA Drosophila melanogaster 61 CG2059 FBgn0029942 FBtr0071047 1 1 1 80 X 7181120 7181211 GTTTCCCGAAAGGTGTACG 58 7181254 7181273 CATCGCTTTGGAATTGTGGA 59 NA Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 2 2 2 105 X 7126724 7126743 CCAGCGGATCTAGGATACAC 59 7126810 7126960 GTGGTATTGTCGTTCTCGTC 58 NA Drosophila melanogaster 61 CG4558 FBgn0029914 FBtr0300177,FBtr0070995 1 2 2 60 X 6744659 6744677 GAGTCCATTGACTTGAGCC 58 6744699 6744719 GCTGGAAGATCTGATGATTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870 3 1 2 190 X 6170568 6170586 TGTGACCAAGTTCCGTCTC 59 6169193 6170268 CATGACGGCAGCTAATTGG 59 NA Drosophila melanogaster 61 CG3781 FBgn0029853 FBtr0070895 1 1 1 60 X 6155874 6155894 GATGGATCACGAGCTATTCCT 59 6155916 6155934 CTGGCTCTTATCCTTGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070875 2 1 2 86 X 6114596 6115423 TACCCTTCCAATATGGCTCTG 59 6115471 6115489 CAGAAAGACCACGTTGCTG 59 NA InUTR Drosophila melanogaster 61 rux FBgn0003302 FBtr0070889 3 1 1 105 X 5931001 5931109 AGAACATAAGGAGACGCCT 58 5930914 5930932 GTAGAAGCTGAGGATGCAG 57 NA Drosophila melanogaster 61 CG12236 FBgn0029822 FBtr0070825,FBtr0070826 2 2 2 118 X 5803874 5803954 TTGAGATGACCCGATTGCT 59 5804036 5804054 CACAGACACCGTAGTCGAG 59 NA Drosophila melanogaster 61 CG15764 FBgn0029817 FBtr0070820 3 1 1 60 X 5763798 5763818 TGAGATATCTGATAGAGGCCA 57 5763840 5763858 CAGAGATCCTGGACATCCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tre1 FBgn0046687 FBtr0070848 3 1 1 95 X 5569070 5569159 CGATTCTTCCAGGAGAGCT 58 5568993 5569012 CATGCTGAGGAGTGAAACAG 59 NA Drosophila melanogaster 61 XRCC1 FBgn0026751 FBtr0070763 1 1 1 80 X 5225488 5225568 CATCAGTGGCATACAGAATCC 58 5225607 5225628 CAATCAGCCTTATACTTGGCTC 59 NA Drosophila melanogaster 61 CG17764 FBgn0029751 FBtr0070757 2 1 1 60 X 5200921 5200939 GTGCGGGATTTAGTTAGCG 59 5200879 5200898 CATCATCCTCGCTATCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949,FBtr0070728,FBtr0112950,FBtr0070729,FBtr0112948 2 5 5 75 X 4823412 4823430 GGTAGTAAGCGTCACTGGG 59 4823290 4823308 TCTTCTGTTTGGCCATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12685 FBgn0040910 FBtr0070673 3 1 1 103 X 4409689 4409707 ATATGGGATGTGCGATGCA 59 4409773 4410064 GACACAGCACATGACAATCC 59 NA Nonspecific Drosophila melanogaster 61 CG32786 FBgn0052786 FBtr0070614 3 1 1 80 X 3835201 3835274 TACTGGAGTGGAAACGATGAG 59 3835313 3835334 TATGATTAGATCGTGCTCCTCC 59 NA Nonspecific Drosophila melanogaster 61 CG16782 FBgn0029659 FBtr0070531 3 1 1 147 X 3354061 3354080 GCGTATCAAGCTAGATTGCT 58 3353863 3353883 AGAGAACAACATTGAGCACAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14424 FBgn0025644 FBtr0070563 3 1 1 204 X 2821181 2821200 GGCAATTAAGTTGGTAGCCC 59 2820667 2820688 CACGATCTTCTTGAACTTAAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG13762 FBgn0040333 FBtr0300708 1 1 1 80 X 2517675 2517696 CTCAATAGCTATCCAGAGTTGG 58 2517536 2517636 GTAGTCAATCACCTTCATGCT 58 NA Drosophila melanogaster 61 Vml FBgn0085362 FBtr0112535 3 1 1 60 X 2170747 2170765 GCATCGTCGTATTCAGCAC 59 2170789 2170807 AATATGAGGGTGCAGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14053 FBgn0029603 FBtr0070424 3 1 1 60 X 2086468 2086487 TATGTTCTGTGGACGATCGG 59 2086427 2086446 CAGAAGATGACTGCCATACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14054 FBgn0029596 FBtr0070338 3 1 1 110 X 1960053 1960072 AGAATACTGTACCGACTGGG 58 1959909 1959980 CAGATTTATCCAGCGCCAG 58 NA Drosophila melanogaster 61 CG4406 FBgn0023545 FBtr0070347 2 1 1 80 X 1902787 1902805 CTCGGAGGAGATAACCAGC 59 1902647 1902745 AAGAATAGCTCATTGTACCGC 58 NA Drosophila melanogaster 61 CG14809 FBgn0040898 FBtr0070276 1 1 1 191 X 1651297 1651315 TTTCTACTTCGGATTGCCG 58 1651124 1651142 CAAAGGATGCTGGACTCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3795 FBgn0025378 FBtr0070278 3 1 1 110 X 1603620 1603638 ATCTCAGTCTGGGTGATGC 59 1603463 1603546 GTGGTCCGAACTGAATGAC 58 NA Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089815,FBtr0089814 1 2 2 80 X 1578774 1579693 CAAGGTGTCGATGGATGGA 59 1578712 1578731 TACTGGCTGTAGTATGGCTC 58 NA Drosophila melanogaster 61 CG18091 FBgn0024368 FBtr0070242 1 1 1 119 X 1202720 1202738 CAGAATAGGCTCAGAGCCC 59 1202619 1202637 GAAGTTGGCCAAGACAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14631 FBgn0029552 FBtr0070172 1 1 1 80 X 906282 906300 TCTCGACATCGGAAACCTC 59 906344 906362 TATTCATCCGGTCACCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070131,FBtr0070133,FBtr0070130 3 6 6 81 X 631310 631554 GGATATACAATGAGACACAACTGG 59 631594 631612 ATGTTCGAGATGAGCAGGT 58 NA Drosophila melanogaster 61 sdk FBgn0021764 FBtr0302260,FBtr0070132,FBtr0302259,FBtr0070131,FBtr0070133,FBtr0070130 2 6 6 80 X 631310 631554 GGATATACAATGAGACACAACTGG 59 631593 631611 TGTTCGAGATGAGCAGGTC 59 NA Drosophila melanogaster 61 Su(Ste):CR41533 FBgn0085673 FBtr0302348 3 1 1 63 U 7761380 7761401 ATTTCTGTGAACGAGTGAACTG 59 7761338 7761356 CCATCTGGACCAACCTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41520 FBgn0087011 FBtr0302582,FBtr0114112,FBtr0114111 3 3 4 84 U 1352855 1362606 GCAACAAACGATATGCTCAG 58 1362651 1362671 CCCTCATATCCGTCTATTTCC 57 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300344,FBtr0300343 3 3 3 80 4 499214 499233 AACAAACTCCCAAGTAGCCA 59 498699 499174 AGCTTCGTATACTGTACATCCT 58 NA Drosophila melanogaster 61 plexB FBgn0025740 FBtr0089179 3 1 1 240 4 61908 63554 GAAGCATTCGACAAGGAGC 59 61686 61706 TTTAAATCATCAAGTCGGCGG 59 NA DesignRelaxed Drosophila melanogaster 61 snoRNA:Psi28S-2442a FBgn0082989 FBtr0113582 2 1 1 63 3R 1424438 1424457 ATCGGTGTCAAGAATATGCA 57 1424394 1424415 GTGTTTAGGACAAACCAAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 3 1 1 223 3R 27594042 27594118 GGCCCATCCAATTAATGGC 59 27594305 27594323 GAGACATAGACACCGGACC 59 NA DesignNoJunction Drosophila melanogaster 61 pncr017:3R FBgn0046756 FBtr0091956 1 1 1 221 3R 27594042 27594118 GGCCCATCCAATTAATGGC 59 27594303 27594321 GACATAGACACCGGACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CR31084 FBgn0051084 FBtr0085007 3 1 1 169 3R 22251201 22253693 GATGAAGATGCCACGAACAG 59 22253822 22253843 CCGCTGTGTAACTGTATTACTG 59 NA Drosophila melanogaster 61 tre-1 FBgn0085056 FBtr0113492 1 1 1 60 3R 12592046 12592064 TTTGCCAACAGATAGCACC 58 12592004 12592022 GTTGCCTCAAGGTCAAACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15549 FBgn0039810 FBtr0085752 3 1 1 62 3R 26762131 26762149 TTCTGGCCCAAATTATCCC 57 26762087 26762105 TGGGATCTGAGCAGTTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31010 FBgn0051010 FBtr0085725 2 1 1 148 3R 26531793 26531811 ATTCAGAGTGCAGTTTCCA 57 26531598 26531616 TCACTAGGGATGTACAGCT 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2224 FBgn0039773 FBtr0085691 3 1 1 81 3R 26283112 26283192 GGATTCATACTCATCCAACTCAG 58 26283053 26283074 GGCATCATAATCTGATAGGAGC 58 NA Drosophila melanogaster 61 sas-6 FBgn0039731 FBtr0085546 3 1 1 173 3R 25821102 25821120 GGAGCGAGGATAGCTACTC 58 25821257 25821334 TTAATCGGAGTTGCAGCAG 58 NA Drosophila melanogaster 61 ppk21 FBgn0039675 FBtr0085448 3 1 1 90 3R 25492257 25492333 ACTACTAGCTAGCTTTGGTGG 59 25492384 25492403 GCCGATGGAGAAGTAGTAGG 59 NA Drosophila melanogaster 61 CG11951 FBgn0039656 FBtr0085403 1 1 1 80 3R 25063433 25063451 TTACAAGATCAACTGGCGG 57 25063309 25063390 AGTAACGGAGATCCATCTCG 58 NA Drosophila melanogaster 61 CG34295 FBgn0085324 FBtr0112491 1 1 1 60 3R 24615686 24615706 ACCGCTGCAAATTATCTTCAC 59 24615724 24615746 CGCTTTGACTACATTATCCACAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5987 FBgn0039501 FBtr0085180 2 1 1 80 3R 23075819 23075840 CGAATGCTAAAGATCTTTCCAC 57 23075703 23075778 CATGGCATCTCCATAGTCC 57 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 2 3 3 80 3R 22981220 22981298 AACCCAGTGTGCTTATTGG 58 22981342 22981360 CATTGTTATCCGCCATGGT 58 NA Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100338,FBtr0100337,FBtr0100335,FBtr0100340,FBtr0100339,FBtr0085093,FBtr0100336,FBtr0100334,FBtr0085092 2 9 9 96 3R 22701114 22701273 AGGAAGATGACATATGCGAG 57 22701037 22701055 CCGTAGAACAACTTCAGGT 57 NA Drosophila melanogaster 61 CG31086 FBgn0051086 FBtr0084989 3 1 1 102 3R 22011375 22011464 AATCGAAATGGACGGTCAC 58 22011530 22011548 AATGAAGATGGTGTCGCCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 And FBgn0011273 FBtr0084904,FBtr0301963 1 2 2 60 3R 21638682 21638702 GCTTTGTGATGATCAATCTGG 57 21638721 21638742 CGAATCATCTCATCGATCTCCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31093 FBgn0051093 FBtr0084917 3 1 1 100 3R 21616050 21616139 CTCTTTCGCTATAGTGATCGAG 58 21615971 21615990 ATAACGGTCGATTGCAACTG 59 NA Drosophila melanogaster 61 Vps33B FBgn0039335 FBtr0084835 3 1 1 97 3R 21299738 21299756 CTGGTTTGTACGGACTGGT 59 21299817 21299899 CTCGTAAAGATTGGGCAGC 59 NA Drosophila melanogaster 61 CG13659 FBgn0039319 FBtr0084828 2 1 1 80 3R 21127754 21127838 CCACAGATATTACGAGTTTCTACTG 59 21127872 21127894 CCTATATCCAACTTATGGGTTCG 58 NA Drosophila melanogaster 61 Nup358 FBgn0039302 FBtr0084813 1 1 1 80 3R 21078949 21079026 ATATGTTTGGTCCTCGAAATCC 58 21079067 21079085 TGTAAGGTGCTACCGAAGG 59 NA Drosophila melanogaster 61 CG13652 FBgn0039284 FBtr0084781 3 1 1 156 3R 20986965 20986983 CATCTCAATCTACGCGCTG 58 20987580 20987598 CTGTCTGGAGGTTCTTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG13652 FBgn0039284 FBtr0084781 1 1 1 103 3R 20986965 20986983 CATCTCAATCTACGCGCTG 58 20987527 20987545 CTTCTTGCTCCTTGCATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11820 FBgn0039270 FBtr0084765 2 1 1 62 3R 20891645 20891663 CTTGTGACCAAACAGTCGG 59 20891744 20891767 CTCGGCTATAATCTCTTCTATAGC 58 NA DesignNoJunction Drosophila melanogaster 61 veli FBgn0039269 FBtr0084787,FBtr0301664 1 2 2 91 3R 20890640 20890658 AATAATACCTGGAGGCGTG 57 20890503 20890585 TTTCTCCTTCGACAGACAC 57 NA Drosophila melanogaster 61 Osbp FBgn0020626 FBtr0084801 3 1 1 96 3R 20761858 20761984 ACGTTCAAATCAATCCCTTGG 59 20761782 20761800 ATGTTGTTCACCGTTGTGG 59 NA Drosophila melanogaster 61 CG42539 FBgn0260656 FBtr0301215 3 1 1 91 3R 20735204 20735223 CCGAGATCTCATACTATGCC 57 20735276 20736513 CAATACTCCAGTTTCGTCGT 58 NA Drosophila melanogaster 61 CG13640 FBgn0039237 FBtr0084730 3 1 1 60 3R 20687676 20687694 GGCTATGGAAGCTATGCTG 58 20687634 20687655 AAGAGTAGGAATTATATGCGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HdacX FBgn0051119 FBtr0084734 3 1 1 117 3R 20681660 20681735 CACATTCACAAGCTCCTGTG 59 20681562 20681584 GTGACTTTAGGTATTCCCTTGTG 59 NA Drosophila melanogaster 61 CG5720 FBgn0028471 FBtr0084633 3 1 1 80 3R 20141034 20141052 CATAGACTGCAACTACGCC 58 20140911 20140990 ACGTGAGAGGATAGTGGTG 58 NA Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0300475 2 1 2 135 3R 19932654 19932672 TGGTTGATACGACTACGCA 58 19927759 19932557 TGCTTGGATTCGGATATTTCG 58 NA Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 2 4 4 100 3R 19870978 19871167 AAATCAAGGTCAACTGGGC 58 19870896 19870914 CTCAATCTCGGGACTGAGG 59 NA Drosophila melanogaster 61 sba FBgn0016754 FBtr0112889,FBtr0112888 3 2 2 80 3R 19723175 19723194 ACAACTACCTGTAGTCCACG 59 19723054 19723136 GGATACACATTGTACCATATCGC 59 NA Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 3 2 2 111 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594258 19594276 ATAACGTAGATGGCGTGCT 59 NA Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 1 1 1 60 3R 19228919 19228938 TCAGCTACTTAAGGTCGTGG 59 19228958 19229529 GCTGTAGACAATCAAAGACTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13837 FBgn0039042 FBtr0084345 1 1 1 60 3R 18869965 18869985 TAGGCATAACCACTAAATCCC 57 18870007 18870025 AATGGTTCCGCTTTCTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084329,FBtr0084328 3 3 3 80 3R 18539679 18539697 ATCACATTGGATGGAGAGC 57 18539554 18539635 TACCTCGAGGATCGTATCC 57 NA Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0084252 2 1 3 81 3R 18288242 18288320 CCACTGTCCATATAGCGCA 59 18288365 18288383 TAAACTCGCGAGATCAGCA 59 NA InUTR Drosophila melanogaster 61 mats FBgn0038965 FBtr0084229 1 1 1 113 3R 18247754 18247772 GATCTCATGAAGCATGCGG 59 18247849 18247928 AAAGTCCACGGTGTTAACG 58 NA Drosophila melanogaster 61 CG42390 FBgn0259736 FBtr0300007,FBtr0300008,FBtr0300006 3 3 3 107 3R 17956512 17956600 GATCTGAGATTGACGATCTGC 58 17956669 17956687 CCAAATGCATTCGGGTCTG 59 NA Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0111019 1 1 2 80 3R 17704016 17704035 AGTACCACTGTAGCAAGAGG 58 17703787 17703975 AGCATTGGTAAGCCTTAAGGA 59 NA Drosophila melanogaster 61 CG31431 FBgn0051431 FBtr0084137 3 1 1 93 3R 17697850 17698142 GTTGACTATACAGAGAACACAGAG 58 17698194 17698212 TACTCTCATCGACCAGACC 57 NA Drosophila melanogaster 61 ETHR FBgn0038874 FBtr0084053 2 1 2 105 3R 17085514 17085533 AATCTGCGAGCCATTAAAGG 58 17085599 17089751 GATGATGGGACTCGTAAAGAG 58 NA Drosophila melanogaster 61 CG10825 FBgn0038860 FBtr0084015,FBtr0113258,FBtr0084014 3 3 3 60 3R 16956316 16956334 CCAGATGTACTGCGAATGG 58 16956355 16956376 TGCGATTGAACGACTTAAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31205 FBgn0051205 FBtr0300451 1 1 1 80 3R 16557423 16557500 CCACTTTACATCCAACAATCC 57 16557539 16557560 TGTCACTATTGTACTGCTTCTC 58 NA Drosophila melanogaster 61 CG3773 FBgn0038692 FBtr0083737 2 1 1 122 3R 15056141 15056216 AAGAGTAAAGGAGGTTCGCA 59 15056301 15056319 TAGTTGCGGAAGGATTCCT 58 NA Drosophila melanogaster 61 CG42359 FBgn0259705 FBtr0299958 3 1 1 287 3R 14987838 14987856 ATTTGCAGAGAAGCATGCC 59 14987493 14987511 AATCGGTGTGATAACCTGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 VAChT FBgn0015323 FBtr0083671 2 1 1 97 3R 14531821 14538158 CGATACAGGTTGTTCACTGG 58 14538217 14538236 CTCTTGATGTTGTTGCTGTG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34282 FBgn0085311 FBtr0112478 1 1 1 84 3R 14520990 14521080 GTACAAGGTTTCGATCATCTGC 59 14521125 14521143 GGCATAGATGTCTTGGCCA 59 NA Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 1 2 2 80 3R 14416081 14416101 CAGAAGTACAGGATCCTTCCA 59 14416141 14416254 ACAGGAATTCGTCTTCTTCAG 58 NA Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 2 1 1 177 3R 14322982 14323593 CCAAGGATCAATGGCAGTG 58 14322823 14322841 AATTCATAACGCAGCCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7988 FBgn0038582 FBtr0083561 1 1 1 84 3R 14046384 14046402 AATCGACTGTCCGGATGTG 59 14046513 14046531 AAAGTAGTCGCTTTGGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 htl FBgn0010389 FBtr0083550 2 1 3 274 3R 13875053 13875071 GCGGACCAATTTGGAACAG 59 13874138 13874161 GTGATATACTCAGTGAGTTGATGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14325 FBgn0038531 FBtr0289974 1 1 1 80 3R 13453636 13453813 ATGCGAATGATCACATTCCG 59 13453856 13453874 TGGTGCTGTAACTCAGTCG 59 NA Drosophila melanogaster 61 AttD FBgn0038530 FBtr0083470 2 1 1 77 3R 13451140 13451158 GAGTATTCGCCTCCACTCC 59 13451199 13451294 CATGACCATTGGCGTTGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31268 FBgn0051268 FBtr0083390 3 1 1 107 3R 12858008 12858091 GAACAGAAACAAGGCAGCA 59 12858162 12858180 TTCATCGGAATTTGCCCTC 58 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 1 4 4 80 3R 12474343 12474430 GTAGACATTAAACGCTATGCCA 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 CG14893 FBgn0038451 FBtr0300865 2 1 1 93 3R 12447317 12447335 TACACCTACACCAAAGCCT 58 12447391 12447469 TCGCAATTATGACTGATGGC 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 2 5 5 114 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377354 12377373 GTGGAAGCGGATACATTGAC 59 NA Drosophila melanogaster 61 CG14880 FBgn0038422 FBtr0083321,FBtr0083320 1 2 2 80 3R 12187841 12187918 GCCAATCTCCTAATTGGTCAG 58 12187781 12187799 AAGATCGGGTCTTGGAGTG 59 NA Drosophila melanogaster 61 GATAe FBgn0038391 FBtr0083218 1 1 1 103 3R 11844307 11844386 ATAGTTCAGCCAGTACCCA 57 11844452 11844471 TTATTCGATGATCGCTCTGG 57 NA Drosophila melanogaster 61 CG9632 FBgn0038377 FBtr0083186 1 1 2 127 3R 11686213 11686231 CCAAATGGCTGATCTCCTG 58 11686322 11686508 TCTCCTTCTTGACCACCTC 58 NA Drosophila melanogaster 61 CG5623 FBgn0038357 FBtr0083197 1 1 1 98 3R 11593041 11593059 ATCTGCGTTGCAATAAGCG 59 11592895 11592913 CTCCCTCCTTACAAACGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 1 2 2 80 3R 11229214 11229232 GGCATTGTTCTCAGCATGG 59 11229096 11229172 GGATTCATGCTGTTTAAGGGT 58 NA Drosophila melanogaster 61 CG14864 FBgn0038311 FBtr0110811,FBtr0083128 3 2 2 60 3R 11092809 11092830 AAATCGACAAGCCCAATTACAG 59 11092770 11092789 AGGACCAGAACATTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3631 FBgn0038268 FBtr0082997,FBtr0114533 3 2 2 85 3R 10707504 10707578 CTACCAATGCTGCCTTCTG 58 10707627 10707645 GTCGATCGATGATTTCCGT 57 NA Drosophila melanogaster 61 CG14855 FBgn0038260 FBtr0082991 1 1 1 113 3R 10622837 10622855 CAACCATATTCGCTGGGAG 58 10622929 10623010 GTGAAACGTATTCGAGAATCAG 57 NA Drosophila melanogaster 61 su(Hw) FBgn0003567 FBtr0082945,FBtr0082946 3 2 2 100 3R 10132889 10132909 AAGAACCTGGAGAAGATCGAG 59 10132743 10132827 ATGTGACCCAGATGGAAGG 59 NA Drosophila melanogaster 61 ems FBgn0000576 FBtr0082863 1 1 1 110 3R 9729025 9729333 ATTCCCTGGAAGTTTCCTG 57 9729407 9729425 TACTGGTTGCTCTCAAAGG 57 NA Drosophila melanogaster 61 Task6 FBgn0038165 FBtr0301654 3 1 1 81 3R 9496547 9496643 CTTTAACCACTATAGGCTTTGGC 59 9496488 9496506 AACATCACGTATTCGGGCT 59 NA Drosophila melanogaster 61 mRpS21 FBgn0044511 FBtr0082764 1 1 1 61 3R 9207219 9207296 AAGCCGTATCAGGTTCGTC 59 9207176 9207194 TCCTCGTTGTAAATGGCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG8790 FBgn0027610 FBtr0082747,FBtr0082748 2 2 2 149 3R 9193746 9193764 CAATACGGACAGCTTTGGC 59 9193875 9193985 GCATTATTGTAGTTGCGTCGT 59 NA Drosophila melanogaster 61 d-cup FBgn0038089 FBtr0082683 1 1 1 80 3R 8718224 8718244 GATCATTTCATCTTCGGTCGA 58 8718286 8718357 AAATCGACCATGTCCAGTC 57 NA Drosophila melanogaster 61 CG12279 FBgn0038080 FBtr0082656 1 1 1 80 3R 8530991 8531073 ATAAACATTCCACTGAGCGAG 58 8531115 8531133 CTTGACGCGTCCATAAGTC 58 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 1 5 5 61 3R 8271982 8272000 AGGGAGTCGATCTATCCGA 59 8272019 8272104 GTAGTATTTCTTCTGGAACATGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 MBD-R2 FBgn0038016 FBtr0082611,FBtr0082612 2 2 2 80 3R 8180558 8180651 TTTGGATATAGCATCCCTTGG 57 8180498 8180517 ATAGGCTGGTCATTTACCCA 58 NA Drosophila melanogaster 61 CoVa FBgn0019624 FBtr0082474,FBtr0082473 3 2 2 87 3R 7645692 7645710 GTCAACGACATTGCACTGG 59 7645761 7645779 GCAAGTAGGGATAGAGGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42394 FBgn0259740 FBtr0302201 1 1 2 80 3R 6677144 6677163 TAGCCGAAAGTGTACAGTCG 59 6677204 6677284 CGCTGTGTACTAATCATGCTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 fau FBgn0020439 FBtr0082309 3 1 4 168 3R 6598880 6602913 TCCTACGCAGTTACGTACC 58 6598730 6598749 ACGATGATGTGATGGATGTG 58 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 2 1 4 80 3R 6598880 6602913 TCCTACGCAGTTACGTACC 58 6598288 6598307 CGAGTAGCTCGAGTAGATGG 59 NA Drosophila melanogaster 61 CG3999 FBgn0037801 FBtr0082225 3 1 1 85 3R 6077681 6077902 AACCTCTGAATGAGCACGA 59 6077951 6077969 ACCCATTCCGATGTAGGAG 58 NA Drosophila melanogaster 61 CG34108 FBgn0083944 FBtr0110788 3 1 1 104 3R 6051480 6051554 GTGAAACCAAGAAGCTACTCG 59 6051620 6051638 GTTTATGGACAGGATCGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8534 FBgn0037761 FBtr0082143 2 1 1 83 3R 5638679 5638697 CTACGATCTCCGCAGAGTC 59 5638743 5638965 AAGTGAAGACCCGCTATCAG 59 NA Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 2 2 2 119 3R 5566748 5566766 TCTATCGACAGTGGACGAC 58 5566849 5566923 GATCTCTGCAGGGATTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833,FBtr0300565,FBtr0300564,FBtr0082092 1 4 4 80 3R 5522450 5522696 CAAATTGAGATACGAATCGCC 57 5522390 5522408 ATCTCGTCCTCGTAGAAGG 58 NA Nonspecific Drosophila melanogaster 61 Dh FBgn0012344 FBtr0082080,FBtr0112870 3 2 2 60 3R 5469373 5469393 ACAAACGGATATCCTCTGGAC 59 5469414 5472753 GCAGAAAGTCATCCTGTGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Scm FBgn0003334 FBtr0082102 1 1 1 80 3R 5460307 5460325 GGTGATCCAGTACATCGAG 57 5460184 5460263 TTACCATCGATTTCGTGCT 57 NA Drosophila melanogaster 61 by FBgn0000244 FBtr0302382,FBtr0082119,FBtr0301093 2 3 3 60 3R 5358057 5358076 CAGAGGCAATACTACCCGAG 59 5358016 5358037 TTCCATTGCTATCGTTCTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33936 FBgn0053936 FBtr0091945 1 1 4 80 3R 5182321 5182339 GTCAGTCACCAAGAAGAGC 58 5182382 5182575 GCTATACCATTGATGCTGGA 57 NA Drosophila melanogaster 61 CG9821 FBgn0037636 FBtr0081931 3 1 2 87 3R 4646091 4646111 AGACGGTGGTGTACATAAGAG 59 4644976 4646042 CGTGCTGATCAGACAAAGG 58 NA InUTR Drosophila melanogaster 61 CG9837 FBgn0037635 FBtr0301932 1 1 2 92 3R 4635384 4635464 TTACTTTGGTCCAGGGTAGC 59 4635311 4635329 TGGTCTTGTCGATGGTGTC 59 NA Drosophila melanogaster 61 CG11762 FBgn0037618 FBtr0081912 1 1 1 80 3R 4551314 4551380 AGCGGACTAAGATTGGTGG 59 4551424 4551442 CAATGCCGATCTGAGTTCC 58 NA Drosophila melanogaster 61 CG31259 FBgn0051259 FBtr0081871 2 1 1 109 3R 4350195 4350213 AGTATCACCATCCGTGGAC 58 4350283 4350491 TAGAGCAAACACGTATACAGTG 58 NA Drosophila melanogaster 61 Syt4 FBgn0028400 FBtr0081578 2 1 1 60 3R 3094800 3094819 TGTGTCTTTGGAACTGATGC 58 3094841 3094923 ACCGATGACCTCATTCTTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2656 FBgn0037478 FBtr0081568 3 1 1 124 3R 2971292 2976781 TGAGGATTTCAGTTTGGTGAG 58 2976867 2976885 CCTTAACGTTCACGTCTGC 59 NA Drosophila melanogaster 61 CG1943 FBgn0037468 FBtr0081635 1 1 3 80 3R 2900625 2900643 TCCGCATCTCTTATTCGCA 59 2900685 2902621 GTTTCAGTGACTTGGAAGGAC 59 NA InUTR Drosophila melanogaster 61 CG1965 FBgn0037466 FBtr0081634 2 1 1 83 3R 2896539 2896626 CCAAAGCAAGTGCAAGAGG 59 2896670 2896691 GCTTAGGAAATTTCGAAACAGC 58 NA Drosophila melanogaster 61 CG1988 FBgn0037464 FBtr0300905,FBtr0300904 1 2 3 80 3R 2888222 2888306 TGCCAGGAAGGTACTTGTG 59 2888350 2888368 CTTCTCCAGGTCTTCCAGG 59 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 1 2 2 79 3R 2579786 2579807 CCTTCCGAGGTTAAATACAGTG 58 2579664 2579682 TTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34297 FBgn0085326 FBtr0112493 1 1 1 80 3R 2573016 2573104 CTCTTTGTTTCATCAAATCGGG 58 2572957 2572978 TCTTCTCGTCCAATTTGTTCAG 59 NA Drosophila melanogaster 61 snRNP2 FBgn0037434 FBtr0081737 1 1 1 93 3R 2171354 2171511 CATAGTTATAATCCGCTATGGCTC 59 2171284 2171302 CCGGTGTTAAACTCCTCCT 59 NA InUTR Drosophila melanogaster 61 CG15597 FBgn0037420 FBtr0302305 3 1 1 84 3R 2110809 2110889 GTCCGCAATGAAAGTATTCGT 59 2110745 2110764 CTTGAGCAGACTGAGGAGAC 59 NA InUTR Drosophila melanogaster 61 CG15597 FBgn0037420 FBtr0302305 1 1 1 82 3R 2110809 2110888 TCCGCAATGAAAGTATTCGT 58 2110746 2110764 TTGAGCAGACTGAGGAGAC 58 NA InUTR Drosophila melanogaster 61 CG31555 FBgn0051555 FBtr0078633 1 1 1 60 3R 1637335 1637359 GAACTGTGAATTCGAGTATAGTACC 59 1637377 1637395 TACCACCTGGTTTGTACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rev7 FBgn0037345 FBtr0078699 3 1 1 60 3R 1414849 1414867 CACAAGAACTTCTTCGCCG 59 1414886 1414909 TCCTTCTGATACACTATTAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2604 FBgn0037298 FBtr0078828 3 1 3 93 3R 1048902 1048981 AGCGATACAGTGATATCGC 57 1048827 1048845 AATCACATCCAGTCGATCG 57 NA InUTR Drosophila melanogaster 61 CG14655 FBgn0037275 FBtr0078881 3 1 1 84 3R 604264 604282 ACCACCAGAGGATTCACAG 59 604028 604046 ACAAGGAAAGAGACTCGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG9769 FBgn0037270 FBtr0078892 2 1 1 60 3R 539106 539126 CTGCTAGACCTTATCCACTCC 59 539066 539085 TGAACATCTGAGTGAACTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me18S-A1806 FBgn0086074 FBtr0114350 1 1 1 60 3L 7632833 7632852 CTTTACTACCCGAACCATCG 58 7632870 7632893 GAATCAGAATTACGTCCCTTTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1086 FBgn0083058 FBtr0113602 2 1 1 68 3L 833163 833182 AAATGTCTGTGCTTTGGTCG 59 833114 833132 ACGATGCTAGTAAGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Uhg8 FBgn0083120 FBtr0300233 3 1 1 86 3L 20446593 20446616 GGAGACACTTAGAAATATTCTGGG 58 20447044 20447253 TTCCTTTAAGGGAGATCAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG14453 FBgn0037179 FBtr0078519 3 1 1 65 3L 22687292 22687310 AGCTCCTCGGATAGTACCA 59 22687339 22687357 AGTTGTGTCGGAGGAAGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 1 1 1 108 3L 22680178 22680196 TAGTTGGAGCAAGATGCGT 59 22680023 22680106 GATGACCTTGAAAGAGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 2 1 1 84 3L 22641788 22641806 GGATCTCGCAATTAGCCAG 58 22641854 22641930 AATTTGACGCTACCTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11438 FBgn0037164 FBtr0078504 3 1 1 60 3L 22460663 22460682 GTTCCTCTTCGTCATGTTCG 59 22460703 22460723 GTGGTAATAGTCGATGATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7130 FBgn0037151 FBtr0078484 2 1 1 60 3L 22068704 22068725 GATTACTACAAGATTCTGGGCA 58 22068665 22068684 ATCCCTTCTTGACGTCTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33292 FBgn0053292 FBtr0078428 3 1 1 90 3L 21651542 21651560 AGAAGAGTGCTCCTTCAGC 59 21651613 21651632 AAGTTCTTGAGGGAGATGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32437 FBgn0052437 FBtr0078344 3 1 1 60 3L 21352203 21352221 ACAACTCAGTTCTCCACCA 58 21352243 21352263 TCTCAACTATCAGACTCAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12971 FBgn0037078 FBtr0078402 3 1 1 92 3L 21349323 21349583 GGCTTAAAGCGAAGGTCTC 58 21349249 21349267 GGATGTATGGCTGTGAAGC 58 NA Drosophila melanogaster 61 Cpr78Ca FBgn0037067 FBtr0078409 3 1 1 92 3L 21285679 21285762 GTCGTTCGGCAAGATTGTG 59 21285605 21285624 ATGGTCCTGTCCAAAGATGG 59 NA Drosophila melanogaster 61 pzg FBgn0259785 FBtr0078336 3 1 1 138 3L 21280139 21280157 TCCACGTAAACTCCTGCAG 59 21280318 21280337 TTTATAGTCACACGAGGTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33912 FBgn0053912 FBtr0091916 2 1 1 156 3L 20748660 20748730 TCACAGAGGTTTATTCCCTAGTG 59 20748526 20748549 TTGGATATAGGTAGCTTAAGGAGG 59 NA Drosophila melanogaster 61 mTerf3 FBgn0037008 FBtr0078215 3 1 1 121 3L 20512989 20513066 CTCTTGATGATTCCTCCGG 57 20512886 20512904 AGTCTAAATTCGCGTGAGG 57 NA Drosophila melanogaster 61 CG5969 FBgn0036998 FBtr0078198 1 1 1 89 3L 20467004 20467022 ACCAAGAACAAGAAAGCCG 58 20467137 20467155 GAAGGAGCTGTAGTCCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5955 FBgn0036997 FBtr0078197 3 1 1 88 3L 20461274 20461292 ATAAGCTCCGCATCTTCGT 59 20461343 20461421 CCGTTGGATCGTAACATTCG 59 NA Drosophila melanogaster 61 CG5282 FBgn0036986 FBtr0078233 1 1 1 120 3L 20418316 20418334 CTCGATTACGAGCCTGGAG 59 20418162 20418232 AAAGAGCATGGTCTGTCCA 59 NA Drosophila melanogaster 61 Ac76E FBgn0004852 FBtr0074897 2 1 1 80 3L 19966659 19966745 AATCGAATTGAACCTGGCC 58 19966789 19966807 ATGTTGCTCAGGTAGAGGA 57 NA Drosophila melanogaster 61 Deaf1 FBgn0013799 FBtr0100666,FBtr0074882 3 2 2 144 3L 19811638 19811656 GAACAGGTTGACTCCTCCA 59 19811764 19812327 GAACCTTGGTGTCCAACTG 58 NA Drosophila melanogaster 61 CG34116 FBgn0083952 FBtr0110816 1 1 1 60 3L 19798827 19798845 AATTCCAAGGGCGAATCCA 59 19798785 19798803 GTTCCTCATGATGCTCCTG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 2 3 3 60 3L 19716991 19717012 ATAAAGGGTTATTCTGGCAACG 59 19716891 19716973 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Gbeta76C FBgn0004623 FBtr0074949 1 1 1 128 3L 19681904 19681928 ATATGAAGACCTATATCACTGGCTC 59 19682014 19682171 CACTGGGATGGTAGCAGAC 59 NA Drosophila melanogaster 61 CG32204 FBgn0052204 FBtr0113429 3 1 1 80 3L 18923740 18923759 TACTGATATACTCGTGGCGC 59 18923239 18923700 CTATTTGCACACCGTAGTAGAC 59 NA Drosophila melanogaster 61 CG6843 FBgn0036827 FBtr0075067 2 1 1 127 3L 18894841 18894861 GCTTCAACAACTACATGTGCA 59 18895028 18895046 ATACTGGTTGCGTAGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3893 FBgn0036826 FBtr0075075 3 1 1 61 3L 18894429 18894447 CCATTTGATACCAGAGCCC 58 18894318 18894337 TAATGTTTCGATCCTCGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Aut1 FBgn0036813 FBtr0075055 1 1 1 81 3L 18742565 18742654 CCTACCTACCAAAGGATAAGCA 59 18742696 18742714 CCGACGTATTCCATCTGCT 59 NA Drosophila melanogaster 61 Chmp1 FBgn0036805 FBtr0075092 1 1 1 138 3L 18676982 18677000 TGTCTACGAGTTCCATGGA 57 18676791 18676809 ATGTTGCCCTTCTGAATCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34252 FBgn0085281 FBtr0112446 3 1 1 109 3L 18064753 18064771 CAACGATAGTTGCCAATCG 57 18064308 18064680 TGCACAGCTGATTAACTCC 57 NA Drosophila melanogaster 61 CG7408 FBgn0036765 FBtr0300282,FBtr0300281,FBtr0075142 2 3 3 83 3L 17873846 17873865 GATCGTCACTTGGGATACCT 59 17873906 17874168 GTGACCATTGTATCCCTTATTCTG 59 NA Drosophila melanogaster 61 CG13723 FBgn0036705 FBtr0075213 2 1 1 60 3L 17257872 17257890 GAAACGCACGAGATTCCTG 59 17257913 17257932 CTACTTCAACTCACCCACCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7724 FBgn0036698 FBtr0075284 2 1 1 96 3L 17050750 17050768 TTCCTGATACCCGGATACG 58 17050824 17050921 CCAGATATTCCTTCTGGTTATGC 59 NA Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585,FBtr0089586 3 2 2 80 3L 17039304 17039322 AGGCTGATCAGACAGATCC 58 17039364 17039456 GTGTAAGATCTTCATCGACGC 59 NA InUTR Drosophila melanogaster 61 CG13024 FBgn0036665 FBtr0273320 3 1 1 92 3L 16803227 16803248 GTTGATAGTCAGCATGAGTACC 58 16803097 16803115 TAGCTCTTGGGCATGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Dab FBgn0000414 FBtr0300196,FBtr0075318 2 2 2 81 3L 16710876 16710894 CCTCTTTCCGGAGGATAGC 59 16710938 16711138 GTTCTGTTGCGGATTTCCTG 59 NA Drosophila melanogaster 61 CG32164 FBgn0042177 FBtr0075313 3 1 1 133 3L 16597698 16597716 CAGGTGCTTACCTTTGTGG 58 16597810 16597890 TAATCATCGTCTTCCTTGAGGT 59 NA Drosophila melanogaster 61 CG13040 FBgn0036608 FBtr0075431 2 1 1 160 3L 16318781 16318866 GTTCCGCTTCATTGCTATCTG 59 16318641 16318659 GGTACTGGGTGAAGCTCTG 59 NA Drosophila melanogaster 61 CG13063 FBgn0036601 FBtr0075366 3 1 1 72 3L 16299751 16299833 TCAAATTGGTGGTGTTGTCTG 59 16299863 16299885 AGAGGAGACTCATAAAGATGACC 59 NA DesignRelaxed Drosophila melanogaster 61 th FBgn0260635 FBtr0075501 2 1 3 120 3L 16033154 16035514 CGACACTGTTTCGACTTCAG 59 16033053 16033073 TCCATAAGACGGAAGATCAGC 59 NA InUTR Drosophila melanogaster 61 CG17026 FBgn0036550 FBtr0075513 3 1 1 96 3L 15969058 15969076 ATACGAGGTTTGCTTGCTG 58 15969135 15969211 ATATGCCAGGAGTCTTCTGG 59 NA Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075534,FBtr0075535 1 2 2 115 3L 15834216 15836651 ATCTAAAGTGCCAATTAGCCAG 58 15834122 15834140 ATAGCGATGGACAGCTGTC 59 NA InUTR Drosophila melanogaster 61 CG32150 FBgn0052150 FBtr0075535 3 1 2 89 3L 15833089 15833842 ATAGCACTGTGGAGCAAGG 59 15833018 15833036 TCGTCTTGTTCGTCACTCC 59 NA Drosophila melanogaster 61 Eig71Ej FBgn0014850 FBtr0075582 1 1 1 65 3L 15653889 15653907 TAAGGCGTTGTGATATGCA 57 15653778 15653796 CATTCTCGCAATCCAGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 comm3 FBgn0259236 FBtr0299851 1 1 2 90 3L 15625056 15625074 ACTGCTCATCGTCTTTGTG 58 15607109 15625002 GTGATTGGCACGGTATGAG 58 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 1 4 4 80 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593966 15594346 CAAAGAATGTTGCAATGCGT 58 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075601 2 1 3 80 3L 15514423 15514503 CCAAATGTTCTGTCCACCG 59 15514361 15514382 TTTCATCTTCGGAATTCAAGGG 59 NA InUTR Drosophila melanogaster 61 CG7857 FBgn0026738 FBtr0075605 3 1 1 82 3L 15497371 15497390 ACAATATACCCTCCGATGGC 59 15497247 15497327 AACACTGTGACCTGGAAGAG 59 NA Drosophila melanogaster 61 CG17173 FBgn0036447 FBtr0075701 3 1 1 60 3L 14761747 14761766 TTGTACTACCTGCAACTGGA 58 14761706 14761725 GGATGTAGTCCATGAAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3919 FBgn0036423 FBtr0273239 1 1 1 112 3L 14404808 14404826 CGTAGAGGCAATCCTCGAG 59 14404902 14405144 ATTGTGTTGCCTCAACGTC 59 NA Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 3 3 4 175 3L 13462162 13462887 GCATGAACAAGGTCTTGCC 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 CG11267 FBgn0036334 FBtr0075875 3 1 1 138 3L 13009567 13009585 CAAAGTACTTGAGGGCACC 58 13009755 13009773 CTCTAGGTTCACCTTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG10960 FBgn0036316 FBtr0075942,FBtr0075943,FBtr0075941 2 3 3 133 3L 12820167 12820186 GTATCCTGTTCGTCTATGCC 58 12819719 12820072 TTTGGAAACCAAGTAGGTGG 58 NA Drosophila melanogaster 61 toe FBgn0036285 FBtr0075980 1 1 1 110 3L 12416884 12416902 ATAGTAGTGCCGGAAGTGG 58 12416726 12416815 CTTCGATATCTATCATCCGATTGG 58 NA Drosophila melanogaster 61 Gap69C FBgn0020655 FBtr0075981 2 1 1 100 3L 12409093 12409384 CTCGACAAAGATTAAAGAGGGA 58 12408939 12408957 TATTCCAACCTCGTTTGCC 58 NA Drosophila melanogaster 61 Smyd4 FBgn0036282 FBtr0075985 1 1 1 97 3L 12394419 12394437 TTGAATGACCTCAAGCTGG 57 12394282 12394358 TCTCCCATGACTGCATAGG 58 NA Drosophila melanogaster 61 CG6938 FBgn0036235 FBtr0290131 2 1 1 80 3L 11980650 11980669 AAACACTTCTGGAGGGAGAG 59 11980708 11980801 GATCCTTGACAATAAACTGCTCC 59 NA Drosophila melanogaster 61 CG14126 FBgn0036223 FBtr0076068 2 1 1 80 3L 11930122 11930140 AGCAGCATATCAAGCACTG 58 11929756 11930082 GCAGATATAGTTGCTGATAGTCC 58 NA Drosophila melanogaster 61 CG6038 FBgn0036198 FBtr0076123 2 1 1 80 3L 11704243 11704334 TCTAATTCACGAGGGCTCTG 59 11704182 11704200 CGCCAGTTAAACTTCTCCG 59 NA Drosophila melanogaster 61 CG18815 FBgn0042138 FBtr0076105,FBtr0076104,FBtr0076103 3 3 3 60 3L 11622555 11622573 ACAGTGGACTATCGCACTC 59 11622597 11622691 CTGATGATGTCCTTGACGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG33271 FBgn0053271 FBtr0076150 1 1 1 162 3L 11570457 11570477 CCAGTACCACTACAACAACTG 58 11570315 11570333 TTTGGGTTCTTGCACTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr67Fa2 FBgn0036109 FBtr0076192 1 1 1 80 3L 10884863 10885121 CCAATATGTTCCGCTACATGC 59 10885163 10885181 CAGCTTCCTGGTTGTAGGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6409 FBgn0036106 FBtr0076273 3 1 1 85 3L 10874948 10875116 GAAGTCGGTTATTATTCTCTTAGCC 59 10874887 10874906 AGAGCTCCTCAGAGGTAGAC 59 NA Drosophila melanogaster 61 Gem3 FBgn0011802 FBtr0076292 1 1 1 106 3L 10455965 10455983 AACGAAGATTCAGGCAGCT 59 10455819 10455842 CGACGGCTATAACATAGATTAGAG 58 NA DesignNoJunction Drosophila melanogaster 61 Ir67b FBgn0036083 FBtr0076294 2 1 1 60 3L 10425016 10425034 GAAATCGCTTGGTTCAGAC 57 10424974 10424992 ACGTTAAGTTCCGTTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CalpB FBgn0025866 FBtr0076343 3 1 1 100 3L 9883309 9883393 GAGAACTTGGCGATTGCTG 59 9883457 9883475 CTCCTGGAAGTCCTGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 2 2 2 80 3L 9862408 9862552 CTGGATCACATTAGGAACAAGG 58 9862591 9862611 ATTCAAATCTATCTCGCGCTC 58 NA Drosophila melanogaster 61 CG18178 FBgn0036035 FBtr0076412 2 1 1 60 3L 9711858 9711879 GAGGAAGATACAATCAAACCGC 59 9711819 9711840 GGATCTTCTCGTCGATAATCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32037 FBgn0052037 FBtr0076469 1 1 1 80 3L 9484846 9484867 TTTACTATATCTTTGCGTGGGC 59 9484716 9484805 ATTTGGCGTTTCTTGTGGT 58 NA Drosophila melanogaster 61 CG4461 FBgn0035982 FBtr0076452 1 1 1 60 3L 9368890 9368909 GATGTGCGACAATTTCATCC 57 9368930 9368950 CGATGACATAGTCGTCATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp22 FBgn0001223 FBtr0100558 3 1 2 60 3L 9366421 9366508 ATGTGGTGATCTACAAAGGC 58 9366531 9366549 TATCGTCAAAGTCCCTCCT 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076534,FBtr0076535 2 2 3 130 3L 9163798 9164103 CAATTACGGTGGACCTCCT 59 9156023 9156041 CTAAACGAGGATCGGTCCA 58 NA Drosophila melanogaster 61 dally FBgn0011577 FBtr0076583 1 1 1 82 3L 8870394 8879385 GTTCCAAAGTCACGTCCTG 58 8879429 8879449 CCATACGGGTATAAACCTTCG 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 1 5 13 83 3L 8623726 8627691 TCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 CG32353 FBgn0052353 FBtr0076631 3 1 1 60 3L 8584781 8584799 GGACAACATCCAAGCAGAG 58 8584822 8584841 AGCAACACTTAAGTCTCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mtrm FBgn0010431 FBtr0076613 3 1 1 60 3L 8406209 8406228 AAATTACGCTTAATCGCACG 57 8406251 8406269 TTCACCTTCAGGGTGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bip1 FBgn0026263 FBtr0302329,FBtr0076745 1 2 2 97 3L 8048535 8048991 CATTGAACTTGTTGAGAGCCC 59 8048458 8048476 CCGAGGAGCTAATGGAGTG 59 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 1 2 2 80 3L 7750857 7750941 CTGTAATGATATCGACGAGTGC 59 7750979 7751000 CATATGAATTCACCAGGAAGGT 58 NA Drosophila melanogaster 61 CG33278 FBgn0053278 FBtr0076857 1 1 1 60 3L 7444687 7444707 GTCGATGTTAAGAACGAGGAG 58 7444727 7444747 CCAAAGATGGTTTAACAGTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32379 FBgn0052379 FBtr0273419 1 1 1 80 3L 7390284 7390920 GTTATACAAGCGACTTTCCGG 59 7390960 7390980 TTGAGTAAATGATCGCCTTGG 58 NA Drosophila melanogaster 61 CG14829 FBgn0035751 FBtr0273403 3 1 1 86 3L 7230609 7230693 CGTTCTACTCACACCTGGT 59 7230541 7230559 GCTAGGCAATCGATTCCAG 58 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299552,FBtr0299551,FBtr0299546,FBtr0299547,FBtr0299549,FBtr0299548,FBtr0299550 1 9 9 80 3L 7176524 7176542 ATTGGTACGAGTGGTCTCG 59 7175772 7176480 AAGTGGAATTTGCCATCGC 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906,FBtr0076905 3 3 4 85 3L 7060849 7060868 ATAATTGACCCGGACGACTC 59 7061140 7061158 TAGCTACGCACAATACGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32396 FBgn0052396 FBtr0076969 1 1 1 134 3L 6524012 6524083 GAGATTCTTTCTGGCACGTG 59 6524180 6524198 CATAGAACCGTTTGCTGGC 59 NA Drosophila melanogaster 61 Lcp65Ae FBgn0020640 FBtr0077056 1 1 1 141 3L 6131003 6131081 TTCAGTGGTCCTTCGAGAC 59 6130880 6130898 TTGACTTCGTAGGTCTGGC 59 NA Drosophila melanogaster 61 CG10467 FBgn0035679 FBtr0077063 1 1 1 60 3L 6087171 6087189 CAGGTGTCTAAGAACCGAG 57 6087129 6087147 TATCGAAGCCTACAAAGCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Jon65Ai FBgn0035667 FBtr0077067 2 1 1 60 3L 6047164 6047182 TCATTGAGCACGGATCTGG 59 6047122 6047140 GACCAGAAGTCTACGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10592 FBgn0035619 FBtr0077129 2 1 1 84 3L 5586294 5586382 TATCAACGGCTATCCGTACC 59 5586229 5586249 CAAGATGGTAAAGGGAAGCTC 58 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 3 2 2 84 3L 5500640 5500802 ATCATGCAGATCTACCGCA 59 5500574 5500592 TGTAGGTGTTGGGCATCTG 59 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 3 2 2 91 3L 5138227 5138304 ACCACAAAGGGTTATGCGA 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 CG10671 FBgn0035586 FBtr0077178,FBtr0077177 1 2 2 89 3L 5138225 5138302 CACAAAGGGTTATGCGACC 59 5138154 5138172 ATCAGGATGAAGGCGTGTC 59 NA Drosophila melanogaster 61 Con FBgn0005775 FBtr0073375 2 1 1 80 3L 4952940 4952960 CTGACGTTCTACACATTCCAG 58 4940096 4952900 GAATTTGTTGTCTGACACGAG 57 NA Drosophila melanogaster 61 CG13708 FBgn0035577 FBtr0073358 1 1 1 124 3L 4832350 4832368 AGCACAACCTGATCAACAC 58 4832167 4832263 GTTGCTATATTCACCCAGCT 57 NA Drosophila melanogaster 61 CG32243 FBgn0052243 FBtr0073322 3 1 1 80 3L 4540643 4540720 ATGCGTGGATGAAACTGGA 59 4540581 4540603 CAGGAATCAGACATTGAGTACTG 59 NA Drosophila melanogaster 61 CG7465 FBgn0035551 FBtr0073306 1 1 1 256 3L 4480325 4480427 GACAATATGAAACTCTTCCTGGTC 60 4480642 4480660 TTGAAGAGCTCGTTGACGT 60 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cpr64Ab FBgn0035511 FBtr0073253 3 1 1 136 3L 4211335 4211465 TGATCAAGATCACCCTCATCTG 59 4211220 4211238 CACATTATAGGCGAACGCG 59 NA Drosophila melanogaster 61 CG32259 FBgn0052259 FBtr0300988,FBtr0300989 2 2 2 106 3L 4069637 4069718 GATGAACCCAAATCGTAGCA 58 4069785 4069805 AGTAATCTTTCGACACGTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG33160 FBgn0053160 FBtr0073102 1 1 1 60 3L 3206211 3206232 GGAGAAATATCTCGTACAGGTC 57 3206172 3206190 CTTAACCAGTGATCCGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32284 FBgn0052284 FBtr0073037 2 1 1 94 3L 3186884 3186968 ATCCAACTTGTAGAACCTACGT 59 3187021 3187041 GGGATCAAAGTACTGGTTCAC 58 NA Drosophila melanogaster 61 FR FBgn0035385 FBtr0072980 1 1 1 103 3L 3002288 3008540 TTCCCAAGCTTAAAGTGTCG 58 3008604 3008624 GGTCGGATACTTATTGTTGCA 58 NA InUTR Drosophila melanogaster 61 DmsR-1 FBgn0035331 FBtr0072887 2 1 1 108 3L 2343651 2343672 CTACTCCTCTTTCTCATCACTG 57 2343740 2343860 TCAGGTCACTCAGTCTTAGG 58 NA Drosophila melanogaster 61 obst-I FBgn0052304 FBtr0072880 1 1 1 60 3L 2268417 2268437 GCTCTGGGTACTATCATTGTC 58 2268458 2268477 ACCGAGCATCTGAAATACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sls FBgn0086906 FBtr0072848,FBtr0072849 1 2 2 80 3L 2093803 2093823 CTGAACTGAAGGTTGTAGCAC 59 2092952 2093763 GTTCGTAATCGTACCAAGGAC 58 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0100219 1 1 5 98 3L 1656992 1657011 TCTATTTCCTCTGAGCTGCG 59 1655012 1656931 CTGAGTCAGTTTGGACGGT 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 1 2 5 85 3L 1656737 1656755 TGAAGTCTGGTATAGCGGC 59 1655701 1656688 GACTAGAGGTTCGCTACCC 59 NA Drosophila melanogaster 61 GC FBgn0035245 FBtr0302024,FBtr0072821 3 2 2 198 3L 1624585 1624677 TGTAATAGGCATGTTTCCCTG 58 1624407 1624425 GAAGAGTTGCAGTCCACAG 58 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 2 4 4 111 3L 1551789 1551871 CTATGTGGACGAGATCGTCC 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 CG9184 FBgn0035208 FBtr0072725 2 1 2 262 3L 1322693 1322760 TTGGTTTGGTTATCCTGCA 57 1322449 1322472 CTCTGGTGGATAATAGTAATGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 2 3 3 74 3L 1299144 1299162 CTGTCTACGGCTTCATGGA 59 1299200 1299336 GGCTCTTGTAGCTGACTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Sac1 FBgn0035195 FBtr0072652 1 1 1 83 3L 1248181 1248267 TACAGGAATCTTCGAAGTGG 57 1248313 1248331 TTCATGTCATCGTACACGG 57 NA InUTR Drosophila melanogaster 61 CG13889 FBgn0035168 FBtr0072586 3 1 1 80 3L 847600 847620 GAGTTATCCCTGAAACAGACG 58 847662 847737 ATGCTGGAGGAATTTGTGC 58 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0290220 3 1 2 164 3L 711669 711748 AACTTACGAAAGGAAGTGGTG 58 711525 711545 TGAACTGCATCGATATCTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ppm1 FBgn0035143 FBtr0072553 2 1 1 82 3L 581494 581566 AGGACAAACAGTTCACAATGG 59 581610 581628 ATAGCTTGCATTGGCACAG 59 NA InUTR Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567,FBtr0110875 2 2 2 80 3L 371211 371454 ACCCACATATTACAGTCGCT 58 371150 371170 CACCGTCTCGGAAATATACAG 58 NA Drosophila melanogaster 61 mRpL17 FBgn0035122 FBtr0072503 1 1 1 139 3L 264921 264939 CTGAAGAATGTCGATGGCC 58 265042 265122 TTGGAAATGAGCAGTTCGG 58 NA Nonspecific Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498 2 1 3 80 3L 225902 226224 CGTTGTAGAATTACTGACTGCT 58 226263 226283 TTTGTTCGCAGCTGATATACC 58 NA InUTR Drosophila melanogaster 61 Vdup1 FBgn0035103 FBtr0301890,FBtr0072535,FBtr0072534,FBtr0072536 1 4 4 93 3L 177318 177390 ATCTTAGCACAACCGTTCAC 58 177244 177262 GATCAAGGGACACTCTGCA 59 NA Drosophila melanogaster 61 snoRNA:Psi28S-2444 FBgn0082987 FBtr0113515 1 1 1 60 2R 15330697 15330717 AGAAGATGTGCTTAGTTGGAC 58 15330739 15330757 GTCGAAATTGTACCGTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR42532 FBgn0260437 FBtr0300860 1 1 1 65 2R 7754826 7754844 ATATGGCCTTACCAGGGAC 58 7754873 7754966 AAGCTTCGTACGACCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 1 1 1 60 2R 17520971 17520989 CCAGGTGCATCTTGTAGCT 59 17520831 17520947 GATGGTTCGGTTGATGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 pncr016:2R FBgn0062961 FBtr0091953 1 1 1 136 2R 14598983 14599059 GACTGCTGATTGCTTAACG 57 14599156 14599177 ATTACTTAGGATACAGAAGCCC 57 NA Drosophila melanogaster 61 CG9083 FBgn0035077 FBtr0114563 1 1 1 80 2R 20785874 20785961 CGTTTCATAATCAGTGCGCT 59 20786004 20786022 GATGTGGACATGCTCTCGT 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 1 2 3 80 2R 20766555 20766575 TACATAGTGGCCCTAATAGCG 59 20766614 20766696 ATTATGGAACCAAGTTACTCCG 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 2 3 3 80 2R 20721186 20721206 CTCACATTATCTACCTCCCGG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 CG4707 FBgn0035036 FBtr0072338 1 1 1 80 2R 20493023 20493042 GGAGTATCATGACGTTTCCA 57 20492899 20492982 GTAGGAATCTTCTTGTTGCAC 57 NA Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 1 2 2 162 2R 20422601 20422674 ATCGATTCAGGACACCACC 59 20422457 20422475 TAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 2 2 3 112 2R 20090333 20093342 TTGGATCGTAGCATCTTGC 58 20090079 20090097 TCGTACTGCTGGAATTTGC 58 NA Drosophila melanogaster 61 yki FBgn0034970 FBtr0290256 2 1 2 100 2R 19954701 19954719 CAAATCTTGATGGCCGAGC 59 19953687 19953791 AGATTATCCTCAATCTGGAGGG 58 NA Drosophila melanogaster 61 PebIII FBgn0011695 FBtr0072164 3 1 1 119 2R 19914098 19914117 ACATCTATTCGCTCCGAGTC 59 19914586 19914604 TGGTGTACTTATCCTCGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153,FBtr0072155,FBtr0072154 1 3 3 60 2R 19858423 19858442 GAGTTGAGACTGAGCCTGAG 59 19858465 19858483 CGGATCTTAGAGTTGCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3065 FBgn0034946 FBtr0072153 2 1 3 104 2R 19858118 19858136 TAATTAGGGAGCGGTAGGC 58 19858203 19858292 TGGTTTCATGGGTTGTTTGG 59 NA InUTR Drosophila melanogaster 61 Upf3 FBgn0034923 FBtr0072221 1 1 1 103 2R 19782129 19782205 TCGTTAAGATTGTGATGCGG 58 19782045 19782066 CTTGCAGTAGTAATACGAGTCG 58 NA Drosophila melanogaster 61 Dcp1 FBgn0034921 FBtr0301648,FBtr0072223 3 2 2 64 2R 19777600 19777618 TCTACACGTTCAACTCGTC 57 19777554 19777572 TATGAAGAAGGCTCCCTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5554 FBgn0034914 FBtr0072126 2 1 1 176 2R 19732845 19733067 TGATCGAGTTCTTTGCTCCA 59 19733206 19733293 TTACGTGGTAGATGGTGGG 58 NA Drosophila melanogaster 61 CG15800 FBgn0034904 FBtr0072245 3 1 1 60 2R 19678521 19678541 GCTGAGTACCATGAGAAACAC 59 19678481 19678499 CCGGAAGAGGATCTTTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11293 FBgn0034889 FBtr0072081,FBtr0301508 1 2 2 113 2R 19574387 19574560 GAAGCTGTACGATGTTCGC 59 19574637 19574655 AGTAGCTTCGCTTCGAGAG 59 NA Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080,FBtr0114542 3 2 2 103 2R 19571834 19571905 AAATGCACCCATTCGTGAG 58 19571971 19571990 CGCAAGAACCTCTTGTATCC 58 NA Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 2 2 2 128 2R 19272564 19272647 TAATCACCAGTCGCTTCGT 59 19272399 19272417 TATATGACTTGGGCACGCA 59 NA Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 2 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42640 FBgn0261363 FBtr0302290 1 1 1 128 2R 18954181 18954199 CTGCAGAACTTCTTGTGCG 59 18954290 18954371 CGTCTGGTCAACCTTATCCT 59 NA Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0300176 1 1 3 76 2R 18945923 18945941 GATAGTCCGTTGGTGGAGG 59 18945981 18946077 AAGAACACAACCTTGTGCC 58 NA DesignRelaxed Drosophila melanogaster 61 Obp58c FBgn0034769 FBtr0071920 1 1 1 292 2R 18594057 18594131 TGATTTGGTTTGCTGGTGG 59 18593783 18593804 CCTTTCAGTGAACAAACTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847,FBtr0113107 3 4 4 80 2R 18227481 18227500 TATATCACGAGTGTTTGCCC 57 18227290 18227440 GAGTAGTCGGCATATTCAGTC 58 NA Drosophila melanogaster 61 Vps35 FBgn0034708 FBtr0071771,FBtr0071772 1 2 2 80 2R 18075289 18075365 GAACATGAACAACATCTCCCA 58 18075404 18075425 TTGTAGAAGTCGATACAGATGC 58 NA Drosophila melanogaster 61 CG34040 FBgn0054040 FBtr0100095 3 1 1 80 2R 17720593 17720683 CAACAATACAGAGGACGCAC 59 17720532 17720552 CTGCCAGATCTAGCAATAGGA 59 NA Drosophila melanogaster 61 lox2 FBgn0034660 FBtr0071745 1 1 1 80 2R 17677614 17677633 GTTTGGAGGACAGTAACTGC 58 17677498 17677573 TAATGGAAATGCCCTGATCTC 57 NA Drosophila melanogaster 61 CG10307 FBgn0034655 FBtr0071671 3 1 1 96 2R 17576642 17576660 ACTACCAAATCTCCGACGT 58 17576717 17576799 GAGGATGGAATCTTTGTTAGCT 58 NA Drosophila melanogaster 61 CG3295 FBgn0034573 FBtr0071547 3 1 1 60 2R 16904047 16904067 CAAGTGGGCAAAGATGTACTC 59 16904007 16904025 CCGGAACTCTATGAGCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15650 FBgn0034565 FBtr0071554 1 1 1 210 2R 16865710 16865728 ATTAATTGCTGCACTGGCC 59 16865446 16865464 GTCCAGATAGTCCAGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 IM14 FBgn0067905 FBtr0100038 3 1 1 81 2R 16757933 16757951 AACTGTCTGAAGATCTGCG 57 16757996 16758078 CATGAATGACTTGGGTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 1 4 4 89 2R 16557768 16557786 GATAAAGTTGAGCTGCCGG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG16894 FBgn0034483 FBtr0086324 1 1 1 60 2R 16099907 16099927 CCGAATACAATCTGGTGAAGG 58 16099867 16099885 CAAGCGTAACTGGGTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0301882,FBtr0114605,FBtr0086543,FBtr0086544 3 6 6 80 2R 15322109 15322130 TTGGATAGTTATGGAATTGGCC 58 15321993 15322070 GTACCGTGGCTTAATCTTTCG 59 NA Drosophila melanogaster 61 CG10081 FBgn0034441 FBtr0086524 1 1 1 80 2R 15274617 15274697 CCTTATTGGTCTGGACATTGG 58 15274739 15274757 CGTGGAATCACATCGATGC 59 NA Drosophila melanogaster 61 CG9975 FBgn0034435 FBtr0086518 3 1 1 81 2R 15231205 15231294 GGTGTTCTATGACGATTCGC 59 15231337 15231356 GCAATTGTAGGTGGAGTTGG 59 NA Drosophila melanogaster 61 Rgk1 FBgn0034434 FBtr0301531 2 1 1 80 2R 15206944 15206962 AGAATATGAGGCAGCTCCT 57 15205995 15206900 GTGAGCCATATCGCATCTG 58 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 3 3 3 81 2R 15010463 15010484 GAATAAACGCTACAACAAACCC 58 15010304 15010422 ATAAGCAGGTTGCATATGCA 58 NA Drosophila melanogaster 61 Cyp12b2 FBgn0034387 FBtr0086609 1 1 1 83 2R 14643158 14643177 GAGCTTGAACTACTATCGCA 57 14643223 14643299 CATTCCTGACCCTGATCAG 57 NA Drosophila melanogaster 61 CG5189 FBgn0034350 FBtr0299805 1 1 2 105 2R 14336284 14336302 CAAGGATCCCGAGTTCCTG 59 14336368 14336444 GATATTCAGCTTGTCCTTGCAG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 GstE6 FBgn0063494 FBtr0086674 1 1 1 60 2R 14293893 14293911 CGAAGTCAGTGCTCTTCCA 59 14293934 14293953 ATAATGGCATCGTATCGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IM23 FBgn0034328 FBtr0086729 2 1 1 82 2R 14270697 14270718 CAGATTGAGAATGAAGTGCCTG 59 14270572 14270654 TAATCACATTTCCGGCCGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33958 FBgn0053958 FBtr0114576,FBtr0099994 1 2 2 80 2R 14074051 14074125 AAACAAATGGGCACCACTC 59 14073989 14074011 CATCAGCTCATAGTACTCAATGG 58 NA Drosophila melanogaster 61 Dip3 FBgn0040465 FBtr0086734 2 1 1 101 2R 14016519 14016539 ATCTATGATGTCAGCCATCCG 59 14016602 14016697 TTGCAGAAATCGGGAGGAG 59 NA Drosophila melanogaster 61 CG5773 FBgn0034290 FBtr0086813 2 1 1 140 2R 13931084 13931102 ACATTCAACATGGAAGGCC 58 13930870 13930890 GAAACCATCGTCAGAGATCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 swi2 FBgn0034262 FBtr0086889 2 1 1 80 2R 13580288 13582527 GATCTTAATAAGGCTGAGCCG 58 13580228 13580248 GTGGTTATGGTAGTGATGGTG 58 NA Drosophila melanogaster 61 lack FBgn0029006 FBtr0086833 1 1 1 80 2R 13490268 13490286 GCGGAACAATACGAGACTG 58 13490329 13490423 CTATAGGACTCGACCACCTG 58 NA Drosophila melanogaster 61 Cda9 FBgn0034197 FBtr0086984 3 1 1 98 2R 13016476 13016494 TGCAAATTACCCGATTGCC 59 13016554 13016680 GAAAGTGATGGTCACGAACTG 59 NA Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 2 2 2 60 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885855 12885873 GATTCCTCTCAGCTCCTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6665 FBgn0034172 FBtr0087053 3 1 2 60 2R 12845653 12845671 TGAGTACGAGGCGTATCAC 59 12845694 12845777 AGTCTAGTTCACATACGCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5550 FBgn0034160 FBtr0087033 2 1 1 94 2R 12704641 12704660 ACCTTCGATAGGGATAACGA 57 12704717 12704798 TTCAGATTGCTGCTAAGGC 58 NA Drosophila melanogaster 61 CG15615 FBgn0034159 FBtr0300552 2 1 1 80 2R 12681677 12681758 ACAAATTTGGGTTCCTCACTG 59 12681617 12681636 CAGATCTGCTTGTAATCGGG 58 NA Drosophila melanogaster 61 CG42392 FBgn0259738 FBtr0300043 1 1 1 60 2R 12653058 12653076 CAACAATTCTGGTGCTGTC 57 12653016 12653034 CTATCCAACATGGATCGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4927 FBgn0034139 FBtr0100547 2 1 1 80 2R 12459850 12459868 ATTGGCCTCAGGAGATTCG 59 12459984 12460002 CACAATGAAGGGAGTGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG8397 FBgn0034066 FBtr0087261 1 1 1 113 2R 11903959 11904042 AGAGCAGTGGAAGATCACC 59 11903864 11903882 TTCTTTGTCTCGGGATCGT 58 NA Drosophila melanogaster 61 CG8179 FBgn0034020 FBtr0301638 2 1 1 205 2R 11354266 11354359 GATTGTCATACAGACCGGC 58 11354528 11354546 TCCTACGCTTGGTCTTGTC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 3 2 3 80 2R 11269849 11269867 GACCAGGAGCTTATGGAGG 59 11269909 11270918 ATGGTAGCGATCATGAAACAG 58 NA Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087441 2 1 2 106 2R 10658259 10658277 CTGTTATCCTACAGCGGCA 59 10659317 10659335 GTCTTGGCCTTGGTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Adgf-E FBgn0033952 FBtr0087482 1 1 1 116 2R 10545254 10545272 AGCATCCAGGATTCATCGA 58 10544989 10545177 AGCTGGGAAACTCTTTATTCAG 58 NA Drosophila melanogaster 61 CG12862 FBgn0033950 FBtr0087483 2 1 2 60 2R 10527994 10528014 TCCAAGTGCATAAATCTGTCG 58 10527954 10527975 TCTAAGCTAATGAGGAGGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Obp50e FBgn0033931 FBtr0087556 2 1 1 88 2R 10262497 10262574 TGCTCATCTGTGCTATCCT 58 10262427 10262448 AGTACTGCTTAACTCTGTTCAC 58 NA Drosophila melanogaster 61 CG34185 FBgn0085214 FBtr0112378 3 1 1 80 2R 10261686 10261764 TGGACCTGAATCCTATGAAGG 59 10261626 10261649 ATTATATCCTCATCCACCTCATCC 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100372,FBtr0100369,FBtr0290110 2 6 7 80 2R 10184942 10185105 AACTACAACTGCAGATCCCTC 59 10185146 10185165 GGTAACTACGTCGGAAACGA 59 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 3 4 4 84 2R 10126046 10126143 GGTTCACAGGGATCTAAAGC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 CG8067 FBgn0033891 FBtr0087595 2 1 1 117 2R 9871227 9871245 GGTCAAATGTGAACTCCGC 59 9871326 9871405 TAGTCCAACGTCTTCGCTG 59 NA Drosophila melanogaster 61 CG6197 FBgn0033859 FBtr0087623 1 1 1 80 2R 9483296 9483314 TTTGCTGAGTTGGAAACGA 57 9483358 9483439 GGGATCACAAACCTGTGAG 58 NA Drosophila melanogaster 61 Roe1 FBgn0014877 FBtr0087675 1 1 1 108 2R 9441763 9441901 AAATATGAGTGCCCTGCGT 59 9441971 9441991 CAGTTCCTTGGTGAGTTTCTC 58 NA Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 3 6 6 80 2R 9384651 9384890 GATATGATACCTGAAGAGATGCTC 58 9384594 9384612 GCGTCTGAAGTCCAATTCC 58 NA Drosophila melanogaster 61 CG17047 FBgn0033827 FBtr0087753 2 1 1 81 2R 9188252 9188270 TGACCAGCAACTATATGCC 57 9188313 9188613 AAGGAGTATTCGATCATGCTG 58 NA Drosophila melanogaster 61 CG4627 FBgn0033808 FBtr0087738 3 1 1 178 2R 9102394 9102481 CAAATCAATGCAATGCTGGAG 58 9102621 9102639 ATACTATAGACGGTGCGCC 59 NA InUTR Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113079 2 1 4 122 2R 8744164 8744182 AAACGCAACTGTGGTTACC 59 8737634 8737652 GTTACGTAGGCATTGCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 2 2 4 115 2R 8739084 8742605 AGGATGTGATTGAAGCAATCAG 59 8738990 8739008 ACGGGTCAGAAATACAGCC 59 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 2 2 2 102 2R 8378097 8378115 ACTGGAACCAAGGAGTCAC 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 CG8501 FBgn0033724 FBtr0087915 3 1 1 60 2R 8271707 8271725 GACTGATGGACTTACCGGA 58 8271748 8271767 CGACAGTTGCAATTCATCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0301874 3 1 3 196 2R 8225945 8226050 AATACTTAGGCAACATACACGC 59 8226207 8226225 TCAGGATCTGGTCGTTCAG 58 NA Drosophila melanogaster 61 Cam FBgn0000253 FBtr0088001,FBtr0088002 2 2 2 94 2R 8156863 8156881 AGAAACTCACAGACGAGGA 58 8156936 8161287 CATCATAGTCACGAATTCTTCG 57 NA Drosophila melanogaster 61 CG8858 FBgn0033698 FBtr0088008 2 1 1 80 2R 8084043 8084064 GAAGATACGGAGGATAATGCAC 58 8083931 8084004 ATTGGATTCACTTCTCTTGGC 58 NA Drosophila melanogaster 61 Prp8 FBgn0033688 FBtr0088016 2 1 1 80 2R 8047813 8047888 CGATTCGGAAATGCTTTCC 57 8047751 8047771 CCGATACTGAACATGAGAGTC 58 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 2 4 4 80 2R 7786099 7786119 GCCATTAACCACAATAAGCCA 59 7785970 7786059 TCCACTGCTTATCCTGTTGAG 59 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 2 2 2 173 2R 7300280 7300298 GATCCCTCCCTGAACTGTG 59 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG12384 FBgn0033624 FBtr0088155 2 1 1 132 2R 7246479 7246497 ACAACCAAATCTTGTGGCC 59 7245768 7245850 AATGGGTTGTGTCAGTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 iotaTry FBgn0015001 FBtr0088125 3 1 1 60 2R 7244325 7244343 ACGAATTATTGGCGGAAGC 59 7244367 7244385 CTGAATAGACACCTGCCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 betaTry FBgn0010357 FBtr0088122 3 1 1 60 2R 7234355 7234373 TCAACGTGAACATCGTCAG 58 7234397 7234415 TGGTTTCCGTAGCCATAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr47Ee FBgn0033602 FBtr0088114 1 1 1 124 2R 7153159 7153178 ACTCAATCTGGATGGAAGCT 58 7153265 7153628 ATCCCTGAATCACCTGTGC 59 NA Drosophila melanogaster 61 Taf5 FBgn0010356 FBtr0088240 3 1 1 60 2R 6765805 6765823 ATCAATGTGCGTATGCTGG 58 6765763 6765781 TGTGACCCATTAAGCTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7637 FBgn0033548 FBtr0088252 1 1 1 83 2R 6698256 6698339 TACACCCTGAAGAAACGCA 59 6698191 6698210 GGAGTACTTATCCTCCGGTG 59 NA Drosophila melanogaster 61 CG17765 FBgn0033529 FBtr0088274 2 1 1 101 2R 6367955 6367977 GATCTGGAAAGATAAACGCTTCC 59 6368036 6368603 CGAACATGCTTATCATCAGCT 58 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0299832,FBtr0301444,FBtr0301443,FBtr0299833 2 4 4 80 2R 6041101 6041325 CGCACATAGACAGGAACTG 58 6041039 6041061 CACATATAGACCAGGAATGATGC 59 NA Drosophila melanogaster 61 CG12918 FBgn0033477 FBtr0088433 2 1 1 81 2R 5938841 5939054 CTGATGGAGAAGATCTGCGA 59 5938779 5938799 TCTTGAGGAGTGTGAATTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG12130 FBgn0033466 FBtr0088385,FBtr0273269 1 2 2 90 2R 5848194 5848274 CCAAGCTAAACAACACTTACGT 59 5848324 5848343 GCCTTGTCGAAACTTACAGC 59 NA Drosophila melanogaster 61 CG15863 FBgn0033467 FBtr0088441 3 1 1 140 2R 5848383 5848404 GTTATCAAATGTGGTCTGTCCC 59 5847203 5848285 ACAGATTTGGTTTACCAGAACG 59 NA InUTR Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 2 2 2 62 2R 5752729 5752809 ATGCTAACTCCTTGCAGTG 57 5752685 5752703 CACTTTCCGCATACAAGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 hebe FBgn0033448 FBtr0088490 1 1 4 91 2R 5717354 5718800 AATAACAGAGCGAACGACG 58 5717281 5717299 TGTTGTTGATTGTCTCGGC 58 NA InUTR Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 1 1 1 83 2R 5704974 5705123 AAAGATCAACTGGTTCGGG 57 5705170 5705188 TTGAAGTCCTCCATCGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1648 FBgn0033446 FBtr0088493 3 1 2 61 2R 5700164 5707357 AGCTCGATTTCAGCTTCCT 59 5700121 5700139 TTCTTGCTGAAGAGGTTGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 dap FBgn0010316 FBtr0088469 3 1 1 155 2R 5600929 5600948 CAATTCCTCGCTAGAGTCGA 59 5601064 5602431 CGCTCCTTCATGAATTCTGTG 59 NA Drosophila melanogaster 61 CG8801 FBgn0028473 FBtr0088554 1 1 1 89 2R 5285614 5285701 ATTTGGTGGACAATGTGGC 59 5285543 5285561 GGGCAGCTTTCTTCAACTG 59 NA Drosophila melanogaster 61 Cyp4p1 FBgn0015037 FBtr0088592 1 1 1 80 2R 5128884 5128907 GTCTAATGAACATGTCCCTAAACC 59 5128943 5129018 TCAGGTCATCATCTATGTGCTC 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0100119,FBtr0088606,FBtr0088607 3 4 4 100 2R 5119340 5120020 CGAGGAGGACGATAATGGG 59 5119258 5119276 AAATGTTGCGGTAGCTGAG 58 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0088627 2 1 4 85 2R 5013707 5014539 TTTGCAATACTAATCCGGCT 57 5013527 5013545 GAATCCCTTATAGGCGGTC 57 NA Drosophila melanogaster 61 Mys45A FBgn0033379 FBtr0088628 2 1 1 133 2R 5000832 5000912 GAAGCTCAATTCGAGCCTG 59 5000717 5000738 TCACCGTCTTAGAATCATTCCA 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649 1 3 5 155 2R 4789010 4789833 ACATATAAGCCGGAGCTGG 59 4789950 4789970 TGTACTTCATCATCTTAGCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ptc FBgn0003892 FBtr0089427 3 1 1 81 2R 4550267 4550426 CTTCTCAGGGCAAATTGTATCC 59 4550463 4550486 AGACTCTTGGGTATCTTAAGATCG 59 NA Drosophila melanogaster 61 CG30371 FBgn0050371 FBtr0088798 1 1 1 80 2R 4155779 4155885 GGGAAATCCTTCCAGTTCCA 59 4155718 4155736 GGGTCGCTAACATACTGCT 59 NA Drosophila melanogaster 61 CG2291 FBgn0033279 FBtr0088802 2 1 1 60 2R 4148554 4148572 AGATCGACGAAGTCCTGTG 59 4148512 4148530 GGAGCATGATGGTACTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088811 1 1 4 122 2R 4035889 4043567 CCTAGCAGATCAGTAACAGG 57 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 CG2158 FBgn0033264 FBtr0088783 3 1 1 129 2R 4012043 4012124 GAGTTTAAACAGGTTGTGGAGG 59 4012214 4012232 TTTCGGAGTCCTTGACAGG 59 NA Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 3 1 1 92 2R 3812037 3812120 TTGCCAAGTAGTCACTGGG 59 3811963 3811981 GCCTTCTCCATGAATTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12825 FBgn0033221 FBtr0088829 2 1 1 97 2R 3676781 3676799 AGGAGGAATCATCTGCTCG 59 3676856 3676940 TCTCGTAGAGTCCATATTTCCAG 59 NA Drosophila melanogaster 61 Ady43A FBgn0026602 FBtr0089050 2 1 1 221 2R 3132012 3132502 CTTCTGAGAGCTCTCGGTG 59 3131809 3131827 CCTGATACATGAGGCACAC 58 NA DesignRelaxed Drosophila melanogaster 61 Tsp42Eq FBgn0033138 FBtr0089060 2 1 1 83 2R 2950523 2950541 AACGAGACCATTTACGACG 58 2950275 2950478 GCAGCAGTGATACTTGATCTC 59 NA Drosophila melanogaster 61 Tsp42Ep FBgn0033137 FBtr0089062 2 1 1 87 2R 2944908 2944989 CTCTATATGCTACTCGGCATAGG 59 2944843 2944861 AATAAGTGTGCTCTGGCGT 59 NA Drosophila melanogaster 61 Tsp42Ei FBgn0033130 FBtr0089028 3 1 1 63 2R 2923096 2923114 TCATCATTGCGATCTTCGG 58 2923139 2923549 TATATGAGGAGCCTCACAGGA 59 NA DesignNoJunction Drosophila melanogaster 61 vimar FBgn0022960 FBtr0086183,FBtr0086182 2 2 2 87 2R 2864776 2864795 CCATGCTCGAAATACACCAG 59 2864650 2864726 AGTGCGAGTTTCTCCTGTC 59 NA Drosophila melanogaster 61 CG11211 FBgn0033067 FBtr0086005 2 1 1 80 2R 2068748 2068820 ACAGGAAAGAACGGATATTTGG 58 2068689 2068707 AGGTCCAGAAATAGCTCCG 58 NA Drosophila melanogaster 61 CG17528 FBgn0261387 FBtr0111275,FBtr0111277,FBtr0111274,FBtr0111276 1 4 4 81 2R 706847 706865 AACCCGTCTGTTGGAAGAG 59 706726 706805 AGAGGTAATCTTCTTCCCACAC 59 NA Drosophila melanogaster 61 CG12547 FBgn0250830 FBtr0111273 1 1 1 63 2R 674683 674704 GCAAAGCTTCTATGATAGATGG 57 674579 674661 TTAAGTGGGTTTCGATCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CR33319 FBgn0053319 FBtr0089858 1 1 1 217 2L 20929028 20929156 GTCCACAGATCTGTCAACGA 59 20929331 20929354 CACATAGTCGAGTCTATAAAGACC 58 NA DesignRelaxed Drosophila melanogaster 61 RpL21 FBgn0032987 FBtr0085961 3 1 1 115 2L 22247801 22247819 TCTCAACTATACGACCGCG 59 22247630 22247650 GAATAACTCCATGCTTTCGGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ttm3 FBgn0032971 FBtr0085935 3 1 1 60 2L 22080484 22080503 TCCAGCTCTTTGATCTCACG 59 22080523 22080544 ACATCATTTACTTGGTGTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0110959,FBtr0085901,FBtr0085902,FBtr0301000 2 4 4 93 2L 21701103 21701121 CGATGTTCCATACGATGGC 58 21701178 21701779 ATGTGCAGGATGTCCTCTG 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 3 4 4 92 2L 21389066 21390056 ATTTACCGTTGAAACCGGC 59 21390112 21390130 ACGGATCCTCTTCTGTCTG 58 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602,FBtr0081483,FBtr0081484 1 3 3 80 2L 21281325 21281401 GAATCCGCAGAAACCTCAG 58 21281444 21281463 TGATTTAACCTCATGTCCGC 58 NA Drosophila melanogaster 61 CG31627 FBgn0051627 FBtr0300424 2 1 1 157 2L 21173701 21173719 TAAAGTTGAGATGGAGCGC 58 21173837 21173914 GCTTAAGATGCATTGGAATCTC 58 NA Drosophila melanogaster 61 CG31687 FBgn0051687 FBtr0302224 2 1 2 60 2L 20451265 20451347 GTTGTGTAATAGGCAACTACTACAG 59 20451365 20451383 AAGTAGGAAATGGCCACCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG41072 FBgn0259999 FBtr0100401 2 1 1 99 2L 20257866 20259436 TAAAGCCAACTTTCCCTTCAC 58 20259495 20259515 ACACTCTAGCAAACGATAACG 58 NA Drosophila melanogaster 61 Lar FBgn0000464 FBtr0112800,FBtr0081260 3 2 2 80 2L 19729579 19729600 GCTATCAGTATTATGTCGTGGA 57 19729639 19729729 CATCCGTGACCTTAAATTCAC 57 NA Drosophila melanogaster 61 CG10132 FBgn0032798 FBtr0081247 2 1 1 80 2L 19522320 19522404 CAGCTCATACTGAGATACGC 58 19522447 19522465 CATCTGGTTGGCCATTGAG 58 NA Drosophila melanogaster 61 Top3alpha FBgn0040268 FBtr0081246 2 1 1 99 2L 19499004 19499022 GAAGCTGCCAAATTCCCAC 59 19499082 19499155 GTGTGCAGAACCTTAATCTTCC 59 NA Drosophila melanogaster 61 lectin-37Db FBgn0053533 FBtr0302362,FBtr0091499 3 2 2 80 2L 19419107 19419125 AACTTCTCCTGCTGTTCCT 59 19419165 19419318 TCTCTAGGTTATATCGGTTACCC 59 NA Drosophila melanogaster 61 CG17549 FBgn0032774 FBtr0081221,FBtr0300823 1 2 4 80 2L 19387759 19387869 AACGATATTCGCATCCAGC 58 19387697 19387715 TCCTCTGTACCGATTCTGG 58 NA Drosophila melanogaster 61 CG17568 FBgn0032763 FBtr0081233 2 1 1 84 2L 19181500 19181523 GAATGAGAATTCTCAGGGAAACTG 59 19181382 19181457 GTCCTCCAGTTGCATTTGC 59 NA Drosophila melanogaster 61 CG10621 FBgn0032726 FBtr0081191 2 1 1 97 2L 18953225 18953243 GATAAAGAACACGGTCCGC 59 18952986 18953164 TCAAAGGGTATCCCTCCTG 58 NA Drosophila melanogaster 61 Nedd8 FBgn0032725 FBtr0081192 1 1 1 194 2L 18951528 18951706 AAAGTGAAGACCCTGACCG 59 18951292 18951310 GTGAAGAACGGATCCACCT 59 NA Drosophila melanogaster 61 mRpL13 FBgn0032720 FBtr0089318 3 1 1 297 2L 18858454 18858961 CACCCAATGAATGACTGCG 59 18858175 18858193 TGCGGATTTGATTCGTGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17323 FBgn0032713 FBtr0081104 3 1 1 99 2L 18825158 18825248 GGATGTACAAATTACTATCGGTTCC 59 18825304 18825323 GATGTGTTCTTCACCAGCTC 59 NA Drosophila melanogaster 61 CG5790 FBgn0032677 FBtr0081050 1 1 1 60 2L 18296035 18296054 ATGATGGTAGTGTAGTGCAG 57 18296074 18296095 CTCAGAATGGAGAATACTTCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 btv FBgn0023096 FBtr0273418 1 1 1 80 2L 17980299 17980383 GGTGAGCTAAGACTTCGTG 58 17980237 17980257 ATTGAAGGTTACTCGCATCAG 58 NA Drosophila melanogaster 61 Cyt-c-d FBgn0086907 FBtr0080888 3 1 1 231 2L 16716017 16716035 ACGCGTAATATTCGATCGG 58 16719138 16719156 TCTCTGCATCACCAGAACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 beat-Ia FBgn0013433 FBtr0080806 2 1 1 89 2L 16056331 16075108 CACATTAGAGATGACCGCA 57 16075161 16075179 AAGCATTTCAGTATGGCCT 57 NA Drosophila melanogaster 61 CG4793 FBgn0028514 FBtr0300612 3 1 1 75 2L 15923572 15923591 AATCAGGGATGTGAATCTGG 57 15923690 15923708 GATTGTCAGCCTGTACTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42448 FBgn0259922 FBtr0300217 1 1 1 80 2L 15547596 15547671 CCTTTCTCCAGGACAATAGAC 57 15547713 15547731 TTTGAACTAGAGTGCTGCG 58 NA Drosophila melanogaster 61 CG15256 FBgn0028880 FBtr0300847 1 1 1 86 2L 15550614 15550784 CGTTCAACATGGATGATCCC 59 15550833 15550851 ATTGCCTTGTGTAGCTCGA 59 NA Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 3 1 1 60 2L 15009376 15009450 GCTCTCAATGTGATGAATGC 57 15009335 15009354 GGACAATATCCCGAAACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 mol FBgn0086711 FBtr0080676,FBtr0111014,FBtr0111016,FBtr0080677,FBtr0111015 2 5 5 81 2L 14984074 14984208 CTAGTCATATTAATCACTCGCCTG 59 14984016 14984035 GTGAGAAGGCTTTGTATGGC 59 NA Drosophila melanogaster 61 CG42313 FBgn0259213 FBtr0299711 2 1 1 80 2L 14914437 14916108 CATCACCAGATTCAATTTGAGC 58 14914378 14914396 ACCATCATCGAGGTCAGAG 58 NA Drosophila melanogaster 61 CG16886 FBgn0028938 FBtr0080560 1 1 1 92 2L 13922450 13922532 CCGTTAAGGTTCATGTGCC 59 13922376 13922394 TTTCGACTGGATAGGGAGC 58 NA Drosophila melanogaster 61 Orc5 FBgn0015271 FBtr0080543 3 1 1 102 2L 13831070 13831088 GATTGTTCGTCAAGCACCA 59 13831207 13831225 GATTTGGGTCCCAAAGTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9306 FBgn0032511 FBtr0080472 2 1 1 174 2L 13370846 13370865 CTTAGAGTCGTGGTACGACC 59 13370554 13370631 ACTGTTGGCAAAGTTTCGG 59 NA Drosophila melanogaster 61 CG6116 FBgn0032499 FBtr0080460 1 1 1 80 2L 13287249 13287267 TATTCGGCGGAAAGAAGAG 57 13287311 13287389 CGTTAACTGGGATCTTCCG 58 NA Drosophila melanogaster 61 CG5776 FBgn0032450 FBtr0080407 2 1 1 141 2L 12704100 12704118 GCACAGCTACACATTGGAC 59 12703919 12703997 TGCAATGGAGTTTGAAATCCC 59 NA Drosophila melanogaster 61 CG17218 FBgn0032421 FBtr0080343,FBtr0080342 1 2 2 227 2L 12173089 12173108 ATATCCTATTCGCCATCGTG 57 12173376 12173394 GAAAGTAGCGCCATTCACC 59 NA DesignNoJunction Drosophila melanogaster 61 Ada1-2 FBgn0051866 FBtr0080287 2 1 1 60 2L 11993138 11993157 TAACACCTGACAAACTGCAC 58 11993180 11993198 TCGATCTTGTTGAGCAGGG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dgt2 FBgn0032390 FBtr0080285 1 1 1 125 2L 11990198 11990216 ATTGGAAGTTATGCGCGAC 59 11990362 11990380 CAATTTGGTACGCACCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Sfp33A2 FBgn0259963 FBtr0300309 2 1 1 68 2L 11837771 11837789 TTAGATTTGACCAACGCGT 57 11837817 11837839 CCATCCTCTATAGTTAGGTACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300385 1 1 2 105 2L 11790005 11790077 TGTCCCAATCAAAGGTTCCT 59 11790202 11790378 AAATCCATAACAGAAGACTCGC 58 NA Drosophila melanogaster 61 CG4983 FBgn0032371 FBtr0080253 3 1 1 82 2L 11652561 11652639 CCGAATCAGGAAATTGCCA 58 11652683 11652703 CCACATTGAATGGATTGAAGG 57 NA InUTR Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 3 2 2 95 2L 11368999 11369735 GGATTTATGGGTCTGCATCC 58 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 CG33695 FBgn0052831 FBtr0091679 1 1 5 80 2L 11277306 11277325 TACGATGAGAACCGTAAGCA 59 11277368 11277451 GCAATTGCCACCTAAAGGA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG32830 FBgn0052830 FBtr0080205 3 1 1 106 2L 11254614 11254632 TAATCCGGCAATGGTTCCA 59 11254701 11255473 CAGGAATGTGCAGAATCGAG 59 NA Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0080234 3 1 2 102 2L 11076856 11076937 TACAGACCCACCAGTTACAG 58 11076773 11076791 GCCGGTATCTAACTTGACG 58 NA Drosophila melanogaster 61 CG17085 FBgn0032309 FBtr0080141 3 1 1 61 2L 10851676 10851697 AACCATATTGAGGTTAGTTCGC 58 10851719 10851737 ATGTACCCAGCACCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lip1 FBgn0023496 FBtr0080124 2 1 1 84 2L 10700224 10700315 CCATCAGTCTGTACTTTAATAGCC 59 10700163 10700181 GTCATCCGGCATAGAAACC 58 NA Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 1 2 2 80 2L 10446356 10446531 TTATGTCAAGGATGACGCTG 58 10446574 10446592 ACGGATTCGTTTAGTGTGG 57 NA Drosophila melanogaster 61 CG5091 FBgn0032234 FBtr0080005 2 1 1 148 2L 10381312 10381385 TTTCATTTCAAGTGCACGAG 57 10381494 10381514 CACCAACAATTCATCTCTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 trk FBgn0003751 FBtr0080078 1 1 1 60 2L 10271804 10271822 CATCCGAGAATCGATGGGT 59 10271762 10271781 TCCAGTTGATCTTCGACGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mob3 FBgn0259482 FBtr0079983 2 1 1 80 2L 10265705 10265723 ATTAATCTGCGGCAAGTGG 59 10265767 10265840 GAAGAAGTCCACAACGTGC 60 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 7 7 83 2L 10259082 10259102 TGTTGATATGTGGCTCAAGGA 59 10258906 10259037 ATCATGGTACCGGTTCTGC 59 NA Drosophila melanogaster 61 CG5846 FBgn0032171 FBtr0079891 3 1 1 60 2L 9956448 9956466 CAATCATCCGCATACTTGC 57 9956406 9956424 GTTGGTGGCACTTAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0100236,FBtr0079916,FBtr0079914 2 3 6 195 2L 9825736 9869533 AGAAAGCTGTCAAGGACCT 58 9815904 9819296 GTTCCACTCCAACGAAAGC 59 NA Drosophila melanogaster 61 und FBgn0025117 FBtr0079866 1 1 1 110 2L 9764614 9764634 TCGCAACTTAAATGGACACTC 59 9764826 9764845 GCGTAGAATTCATCCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13114 FBgn0032127 FBtr0273329 1 1 1 80 2L 9545863 9545881 ATCCGGGACAGAAATTCCA 58 9545923 9546027 CGTTCGAACATCTTTCAACTG 58 NA InUTR Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 3 2 2 101 2L 9460742 9460944 AAGGTCTTGAGGCAATCCC 59 9461009 9461027 CACTATCAGGCCCTTGGTC 59 NA Drosophila melanogaster 61 CG13385 FBgn0032039 FBtr0079660 3 1 1 60 2L 8397038 8397056 GCAGCATAAACCAACCTCC 59 8397079 8397098 GGCATAATACGGTCTTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7466 FBgn0031981 FBtr0079541 2 1 1 80 2L 8049210 8049292 ACTACGAGGTTGATGTACCAC 59 8049334 8049352 GAATCAACGACTCGTGCTC 59 NA Drosophila melanogaster 61 iHog FBgn0031872 FBtr0079365 3 1 1 144 2L 6948538 6948557 TTATTAACTGCGCAAACGCA 59 6948344 6948362 AAACCGGAATTGCTTCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rca1 FBgn0017551 FBtr0079342 1 1 1 60 2L 6852672 6852690 CCTATCCCAGAACACAGCC 60 6852712 6852732 GTCATAGAGAAAGGCTCCTCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11015 FBgn0031830 FBtr0079288 3 1 1 70 2L 6558588 6558954 ATCTGCGAAGAGGATCAGAC 59 6558987 6559005 CACTCACAACGTTTCTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG13989 FBgn0031786 FBtr0079204 1 1 1 198 2L 6160772 6160790 TATATGCCACGATTCCAGC 58 6160952 6161025 TGGTCGTTAAGCAAATCCA 57 NA InUTR Drosophila melanogaster 61 CG13995 FBgn0031770 FBtr0079187 1 1 1 80 2L 6058610 6058631 GCATCTTCTACAAGAACTTCGG 60 6058671 6058765 AGAAGTAGCCTAGCAGAAGG 59 NA Drosophila melanogaster 61 Acp26Ab FBgn0002856 FBtr0079156,FBtr0079157 3 2 2 121 2L 5892729 5892808 CTCCTGCATTTGCCTTTGG 59 5892626 5892648 CACTGTAGTCGTATAGGGTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 obst-E FBgn0031737 FBtr0079164 2 1 2 83 2L 5763367 5765977 CATGTTTGGCTCAATGGCT 59 5763302 5763320 TAAGAGTCGCACTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 GluRIIA FBgn0004620 FBtr0079106 2 1 1 80 2L 5556999 5557080 ATGATGAAGGAGGATCACGAG 60 5557119 5557140 GGAAAGCTTGCTAATGAGATCC 60 NA Drosophila melanogaster 61 CG14015 FBgn0031716 FBtr0079126 2 1 1 90 2L 5538814 5538832 CAAGGAGCGCATCATTCAG 59 5538669 5538760 CAAAGTGGTACGCGAAGAC 59 NA Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079046 3 1 2 197 2L 4981395 4981415 GTGTGAATATCGTTGTTTCGC 58 4981165 4981183 TAGTGGACATGACGTTGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL24 FBgn0031651 FBtr0079058 1 1 1 80 2L 4944855 4944936 GAACCAATTGAGGACTGGAG 58 4944794 4944814 AATTCCCTGCTTTCCTTTGTC 59 NA Drosophila melanogaster 61 CG2816 FBgn0031564 FBtr0300299 1 1 1 97 2L 3703730 3703748 CATGATGCCGGCTTATTGG 59 3703808 3703880 GCAGGCATAGTTTCACTCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 1 6 6 90 2L 3070720 3070830 AAGGAGAAGGAAATCCAGCA 59 3070649 3070667 CTTTGTCATACGTCAGCCG 59 NA Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 1 2 2 80 2L 3040725 3040796 CGTTCCTTCATACTGTCTTGC 59 3040837 3040856 GTCAATCCGGCATACAACAC 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 1 7 7 80 2L 2951959 2951979 GCTATCTAAATAGCGCTCACG 59 2952015 2952100 CTCGGATGAAATCTATATGATTGCC 60 NA Drosophila melanogaster 61 CG15393 FBgn0031429 FBtr0077784 1 1 1 151 2L 2489967 2489985 GACAGACAACCAGTCAACG 58 2489834 2489852 CTAATTGCTGGGTGCTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089787,FBtr0089786 1 2 2 84 2L 1855724 1855745 GTCCCATTGAATTGCATAATGC 59 1855790 1856440 CAAATGGTGACCACAACGG 59 NA Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 3 2 2 80 2L 1747789 1747810 GAAACTACGTGTATCTGTACGG 58 1747851 1748782 CCAGCGGAAATGTCAAGAC 59 NA Drosophila melanogaster 61 CG17660 FBgn0031356 FBtr0077912 1 1 1 82 2L 1708394 1708472 CGACTGAGGAGGAATATGGT 58 1708331 1708349 ATGACGGAAGCGATAACAG 57 NA Drosophila melanogaster 61 CG4896 FBgn0031319 FBtr0077968,FBtr0114467,FBtr0077970 2 3 3 80 2L 1180386 1180405 TCTATGAACGTGTTCAACGG 58 1180447 1180529 GCAGTAGGTGACGATAACTG 58 NA Drosophila melanogaster 61 CG1718 FBgn0031170 FBtr0077233 1 1 1 80 X 21169422 21169441 GGCATGTCCTCGATAATGTC 58 21169290 21169379 GGCGGTGATGTACTTAGTG 58 NA Drosophila melanogaster 61 CG1494 FBgn0031169 FBtr0077187 1 1 1 80 X 21160758 21160934 GTTATGCTATACGGTTACATATCGG 59 21160972 21160990 GCTCGCCATTAAATACGCA 59 NA Drosophila melanogaster 61 CG31320 FBgn0051320 FBtr0082943 2 1 1 60 3R 10186353 10186371 CTCCGCTGTGGTTACTCTC 59 10186311 10186331 TTCTGTAAAGGGACGAAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 twf FBgn0038206 FBtr0082891 2 1 1 111 3R 9948437 9948455 TCTCACCAAACGGGTATCC 59 9948587 9948708 AACTAAGCTGCTCATTCTCGA 59 NA Drosophila melanogaster 61 GstD9 FBgn0038020 FBtr0082608 2 1 1 60 3R 8192397 8192418 GCTATACTGATTTATCTGGCCG 58 8192358 8192377 GATCCTTGGGATAAAGGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14566 FBgn0037127 FBtr0078453 1 1 1 244 3L 21733181 21733199 CTATCCCTCGGCAGATGAG 59 21732955 21732973 CTACTCTCCGGTAGTTGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456 2 1 2 83 3L 21190337 21190414 AAACACATGATCTCCCACC 57 21190461 21190479 AACTTTGGGCCAGTTTAGG 58 NA Drosophila melanogaster 61 fax FBgn0014163 FBtr0100477,FBtr0100478,FBtr0075413,FBtr0075412 3 4 4 81 3L 16398479 16398498 CGAGCAGGAGAAATCAAACG 59 16398262 16398437 CTCGTTTGACTTGTCCTTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 1 2 2 105 3L 10635606 10635624 CATCTGCTCAAGTGCTGTG 59 10635691 10635813 GCGTTAAGAACATCATCTCCC 59 NA Drosophila melanogaster 61 Tsp66A FBgn0035786 FBtr0076861 2 1 3 213 3L 7460943 7461022 ATTCTACGAAAGTCGCTGC 58 7461194 7461276 GGAATACCTCAATGCATATGACTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 3 5 5 67 3L 3300763 3300781 GTAGTACCACCGATCTGGA 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4585 FBgn0025335 FBtr0072227 2 1 1 109 2R 19752635 19752654 TTCAATGATTCAGCAAGGCG 59 19751842 19751860 CTTGCTGATCTGCGAACTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG30194 FBgn0050194 FBtr0300176 3 1 3 78 2R 18945923 18945941 GATAGTCCGTTGGTGGAGG 59 18945981 18946079 TAAAGAACACAACCTTGTGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15658 FBgn0034602 FBtr0071583 2 1 1 91 2R 17085588 17085609 GGACATTAAGTTTCTGATGCTC 57 17085661 17085744 GATCAATTTCCTGGAGCGA 57 NA Drosophila melanogaster 61 Pgi FBgn0003074 FBtr0088679,FBtr0088681,FBtr0088680 3 3 3 92 2R 4799447 4799530 GAGAAGAATGCTCCTGTTATCC 58 4799376 4799394 CTGATCGTAGGGAAGGAGG 58 NA Drosophila melanogaster 61 CG30356 FBgn0050356 FBtr0088717 2 1 1 60 2R 4616735 4616756 TGTGGAATTACATGAGTCTGTC 58 4616696 4616714 TTAAATCTTCGCGCAGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42555 FBgn0260757 FBtr0301254 2 1 1 80 2L 16891725 16891801 GATGTCTCAGAAGATCTTTCCC 58 16891840 16891860 TCTGTTGTATATGTGCAGCTC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 2 4 4 80 2L 15267015 15267158 TGTCCACGTACCAGATGTG 59 15266953 15266971 CGGTCTCCTGGTGTATGTC 59 NA Drosophila melanogaster 61 Bka FBgn0010520 FBtr0079874 1 1 1 114 2L 9895362 9895442 GGAATTACAGCTTACAATGGG 57 9895518 9895536 AATCTGATCCTTAAGCCGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17646 FBgn0031362 FBtr0077886,FBtr0077885 1 2 2 80 2L 1746020 1747700 GCGAAACTACTTTCTGCTG 57 1747743 1747762 ACGTTCATGTACAGATACCC 57 NA Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302121,FBtr0302120 3 2 5 187 2L 835542 835718 ATTTCTTTACGTGGAGTGCTC 58 835375 835393 CTGAACATTGCCACTGGTG 59 NA Drosophila melanogaster 61 mRpL10 FBgn0031231 FBtr0078124 3 1 1 144 2L 203879 204001 CTGATACAAAGAAGCCTTTCCC 59 204106 204124 GATATTTCGGCTGCGTGAC 59 NA Drosophila melanogaster 61 CG31974 FBgn0051974 FBtr0300987 2 1 1 80 2L 141441 141461 TTACAACGCCTTCATTCAGAC 59 141326 141401 ACCTCTTCGAGAAACAATTCG 58 NA Drosophila melanogaster 61 Or47b FBgn0026385 FBtr0088166 1 1 1 80 2R 7207920 7207940 CATGGAGGTCAGTGATAAGAG 57 7207811 7207880 CCCACCAATTTGATAATGTGC 58 NA Drosophila melanogaster 61 Rrp1 FBgn0004584 FBtr0077678,FBtr0290241 1 2 2 80 2L 2971051 2971132 GAGGAAAGTAAACCAGCTCG 58 2970990 2971008 CGATCCACTCTCCTCATCG 59 NA Drosophila melanogaster 61 att-ORFA FBgn0067783 FBtr0089481,FBtr0089482,FBtr0089480 2 3 3 60 3R 16379031 16379310 CTTAAGCGGGAATACTATGAAGTG 59 16378994 16379014 CCAGCGAGACTAGAGTATTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2577 FBgn0030384 FBtr0073643 2 1 1 60 X 12267997 12268016 GATCTCGGTAAGCATTGAGG 58 12268036 12268057 TAAGTACATTGTGAACTCGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14418 FBgn0040354 FBtr0070565 3 1 1 235 X 2777632 2777650 GATTCGGGATGATCCTGGT 59 2777331 2777349 TTTGGTGATGAAACCGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34148 FBgn0083984 FBtr0301007 2 1 2 111 3R 17704026 17704050 GTTATCCCTATATGAAGTACCACTG 58 17703784 17703957 AAGAGCATTGGTAAGCCCA 59 NA Drosophila melanogaster 61 argos FBgn0004569 FBtr0075408 2 1 1 70 3L 16464834 16464921 CACACTTCCGTGACTACAC 58 16464782 16464800 ATGGACTATCTGCTCCGTC 58 NA DesignNoJunction Drosophila melanogaster 61 Uhg5 FBgn0083123 FBtr0300251,FBtr0300252,FBtr0300253,FBtr0300231 2 4 4 109 2R 10510740 10510931 GTCCTAAGATGATGTGACCCA 59 10511213 10511237 CCTTTATAGTTCTTCTGAAGTCCAG 59 NA Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188,FBtr0111187 3 2 2 75 X 22361295 22361313 GTATCCGCTTACCAAGCAC 58 22361238 22361256 CTTAGTCTTGAATCCGCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188,FBtr0111187 2 2 2 75 X 22361296 22361314 TGTATCCGCTTACCAAGCA 59 22361239 22361257 TTAGTCTTGAATCCGCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42582 FBgn0260872 FBtr0301571 3 1 1 82 X 20024912 20024931 TGTCCAATGTCTAATGTCCC 57 20024849 20024867 GGCTAGTAGTGCACTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kek5 FBgn0031016 FBtr0074707,FBtr0074708 3 2 2 113 X 19360247 19362350 CGTCTATGTGGCCAATCAC 58 19362425 19362445 CTATTGGCATACGCATCATCC 59 NA Drosophila melanogaster 61 hang FBgn0026575 FBtr0290069,FBtr0074277,FBtr0074276 2 3 3 80 X 16328101 16328119 ACGAGTTTGACTCGAACGA 59 16328162 16328303 AGCGATGAACCCATAGACTC 59 NA Drosophila melanogaster 61 CG33172 FBgn0053172 FBtr0074092 3 1 1 81 X 15665099 15665204 AACACTGCATAGAGATCGC 57 15665249 15665267 CTCTATATGCAGCTGGTGG 57 NA Drosophila melanogaster 61 CG9215 FBgn0030659 FBtr0074066 1 1 1 60 X 15475178 15475196 GACTCTGTCAAGGAACTGG 57 15475136 15475154 TGGATTCGTCACAGAACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eo FBgn0030597 FBtr0073975 2 1 1 60 X 14811365 14811384 CAGAGTTGATTCAGGCTCAG 58 14811324 14811346 CCCATTATTTGCAGTAGATCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ade5 FBgn0020513 FBtr0073705 2 1 1 187 X 12653941 12654392 AACAGCATCCATAGAGGGC 59 12653772 12653790 GACCGTTGGTGGTATTGGA 59 NA Drosophila melanogaster 61 nod FBgn0002948 FBtr0073516 2 1 1 180 X 11475066 11475151 ACGGAAAGTCGTTAATAGTGGA 59 11475292 11475310 ATTGAGTAGCTCTTGCCCG 59 NA Drosophila melanogaster 61 CG34144 FBgn0083980 FBtr0110988 3 1 1 141 X 11192252 11196639 ATGTTGTGGACATCTCTGC 57 11192129 11192150 CTGTTGTGGTGGTTATTATTGG 57 NA Nonspecific Drosophila melanogaster 61 CG12645 FBgn0030181 FBtr0112973,FBtr0071433 2 2 2 83 X 10047908 10047926 ATCGGAAGGATTAGCGGAC 59 10048431 10048449 GATACGGAAACAGGCAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15247 FBgn0030156 FBtr0071397 3 1 1 83 X 9768869 9768887 CAGGAATACAAGCCAACGC 59 9768732 9768754 GCTCGATATACACAATTATCGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32695 FBgn0052695 FBtr0071398 3 1 1 161 X 9767896 9767918 GGGTGATCTACTTCAATCAACTG 59 9767694 9767775 TTTAGACACGCCTTCTGCA 59 NA Drosophila melanogaster 61 CG42395 FBgn0259741 FBtr0300046 3 1 1 129 X 9469878 9470225 TTTGGCATTACCCTACTACAC 57 9469769 9469787 CGATGGAATCATCCACTGG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 org-1 FBgn0021767 FBtr0071244 3 1 1 82 X 8345438 8345456 GATGAAGCAGATCGTGTCC 58 8345277 8345395 TGGAGTTCAGAATGATATGTCC 57 NA Drosophila melanogaster 61 dec-1 FBgn0000427 FBtr0071146,FBtr0071145,FBtr0071147 1 3 3 140 X 7766946 7767037 TCAGGATGAGATCCTTGGC 58 7766824 7766842 AGAATCGAGTAGGCTGGGA 59 NA Drosophila melanogaster 61 CG12155 FBgn0029957 FBtr0071071 3 1 1 128 X 7623288 7623306 TTACGCTGATCAACCTGGT 59 7623395 7623703 TGTACTTGTTTCCTATCTGCTG 58 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 3 3 3 60 X 6772499 6772579 GCTCTACAAGGCAAATCGG 59 6772601 6772621 GTTGTAGTTGCGATCGTACTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14434 FBgn0029915 FBtr0071040 2 1 1 60 X 6746270 6746288 CACTTGTTCCTTTGCGGAC 59 6746228 6746249 AGTATCCCAGATCCTTTACCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809,FBtr0070810 3 2 2 73 X 5652363 5652438 CTGGAGACCGACATCAAGG 59 5652475 5652493 CTGCTATTGCTTAGTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG3125 FBgn0261383 FBtr0070842 2 1 2 165 X 5638436 5638454 AAGGAGAGGGAGAAAGTGC 59 5637846 5637867 CACCAGGAAGAGTATGATTGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4041 FBgn0029736 FBtr0300998 2 1 1 86 X 4810513 4810585 CAATGAAGAGTTGGCCTTCC 59 4810446 4810464 ATCACCGCCGAATTATCCT 59 NA Drosophila melanogaster 61 Ilp7 FBgn0044046 FBtr0070577 3 1 1 82 X 3562415 3562434 GAGGCTTGGATCAAGAAGAC 58 3562601 3562619 CTTCGCAGAAACATGTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4325 FBgn0026878 FBtr0070342 1 1 1 80 X 1937690 1937708 CGGACAATATACAAGCCGG 58 1937436 1937648 AAGTCCTTGATTGCTTTCTCC 58 NA Drosophila melanogaster 61 b6 FBgn0024897 FBtr0070272 3 1 1 130 X 1581332 1581350 GTCCTCTTGACCTACGAGG 58 1582605 1582699 TTCAACGGGTAGTTCAATCTG 58 NA Drosophila melanogaster 61 png FBgn0000826 FBtr0070234 1 1 1 60 X 1250746 1250765 CTACCAGACATCTTCCACCT 58 1250705 1250725 TGAAGTAATGCTTGTAGAGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41535 FBgn0085795 FBtr0114249 1 1 1 60 U 8853701 8853719 AGAACGAGCACATAAACCA 57 8853741 8853761 CTGAAGATTGAGATAGTCGGG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41605 FBgn0085815 FBtr0114273 3 1 1 60 U 2950899 2950919 AGAACGAAAGTTAGAGGTTCG 58 2950859 2950880 ATCGTTTCTGGTTAGAACAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42422 FBgn0259853 FBtr0300151 3 1 1 91 U 7568437 7568456 GCTTGTTCTACGACGATGAG 58 7568365 7568385 GTTTCGGTGCCTATCATTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42406 FBgn0259837 FBtr0300134 2 1 1 82 U 5414582 5414601 ATGGGCCTGTAGTACTTCAG 58 5414646 5414664 ATCGTCGTAGAACAAGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 JYalpha FBgn0040037 FBtr0299529 3 1 1 80 4 25146 25228 AAGAATGGACCTACAGGGA 57 25271 25290 CCTGTGTTACAACAATCGAC 57 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-3405b FBgn0082959 FBtr0113589 3 1 1 66 3R 24427668 24427688 ACCCAGCCCATATTATATCGT 58 24427713 24427734 GTGCCTTATACTCTTTCATCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3385b FBgn0082961 FBtr0113576 1 1 1 62 3R 1422008 1422026 TCATTCGATTGAGCCAAGC 58 1421964 1421982 TTATCTGGACACCCAACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31339 FBgn0051339 FBtr0083867 1 1 1 60 3R 16020081 16020104 GAGGTCTTAGGATTATCAATGTGG 58 16020123 16020141 ATCAATGAGCTTGCCAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2053 FBgn0039887 FBtr0085873 2 1 1 84 3R 27865002 27865020 CGAGAGCGCTTCTCTAGAG 59 27865067 27865136 CATGGCATCATCACAAACCT 59 NA Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 2 3 3 80 3R 27501827 27501846 TCACAAATCTATCCCTCGCA 58 27501884 27502040 GATGAAGTAGTCGGTTATCTTGTG 59 NA Drosophila melanogaster 61 CG11539 FBgn0039859 FBtr0085868 3 1 1 60 3R 27441490 27441509 ACTTATTCGCGTGATCAGGA 59 27441449 27441467 GCAGGAAGAGATTGGTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr100A FBgn0039805 FBtr0085710 3 1 1 112 3R 26693395 26693639 TGTTCAGATTTCTTGCACTGAC 59 26693712 26693730 ATCTCCGGACAGATAACGC 59 NA Drosophila melanogaster 61 spn-A FBgn0003479 FBtr0085590,FBtr0085589 3 2 2 60 3R 25880944 25880962 TACGCTTTGCTGATTGTGG 58 25880902 25880920 CGCGACCAATATAATCGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 capa FBgn0039722 FBtr0085514 1 1 1 143 3R 25739317 25739926 CAGTACAGCTGAGACGGAC 59 25739192 25739210 TAAATGCCGTCGAGGACTC 59 NA Drosophila melanogaster 61 CG11897 FBgn0039644 FBtr0085387,FBtr0085386 2 2 2 80 3R 24989876 24989957 GATCCAGAAACCGACAAGC 58 24989997 24990019 TCGATGGGCTATAGTCAATACAG 59 NA Drosophila melanogaster 61 CG4980 FBgn0039558 FBtr0085269 3 1 1 152 3R 23747950 23747969 TCTGCCCTACATAGATCACG 58 23747750 23747768 ATCAGCGGAGTCTCAAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Gr98d FBgn0046885 FBtr0085188 3 1 1 80 3R 23372633 23372712 AATGCTGTCAATATAGGCGC 58 23372752 23372773 AGAACTCGCTGTATAAACAGGA 59 NA Drosophila melanogaster 61 m4 FBgn0002629 FBtr0084980 3 1 1 79 3R 21849921 21849942 GAAATTGAGGACTACGACTTCG 59 21849863 21849881 CAGAAGAATGTGCCGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42488 FBgn0259991 FBtr0300440 3 1 1 94 3R 21308948 21308966 TACATGGACTGCATGACCC 59 21309077 21309097 GATTGTACTATCTTCTGGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6980 FBgn0039228 FBtr0084698 1 1 1 83 3R 20633792 20633870 GAACTACAGAGAAGTCAGGGA 58 20633909 20633933 GATGATAGCCTTGTCATAATGTAGG 59 NA Drosophila melanogaster 61 CG6738 FBgn0039053 FBtr0084353 3 1 1 90 3R 18925918 18925990 AGCGTATACGATGGATTCTC 57 18926043 18926061 TTCAACTTAACTCCGGCTG 57 NA Drosophila melanogaster 61 burs FBgn0038901 FBtr0084131 1 1 1 81 3R 17595391 17595476 CCACGGATAATGATATTACGCA 58 17595517 17595536 ACACATCCAGGATACTGGAG 58 NA Drosophila melanogaster 61 CG15696 FBgn0038833 FBtr0083968 3 1 1 99 3R 16672959 16672981 GCATCTTATGTCTCAAAGGAGTC 59 16673040 16673058 GATGGTACCGGGTGTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp12a4 FBgn0038681 FBtr0083731 1 1 1 80 3R 14962098 14962118 TGAAGGTAGACAGAAAGGTGG 59 14962160 14962239 TAAAGGTGCTCGATGTCGT 59 NA Drosophila melanogaster 61 CG14285 FBgn0038674 FBtr0083711 1 1 1 65 3R 14850951 14851027 AAATACGAATCTGGTCACCG 58 14851055 14851073 ATATGTACGCCTCGTGAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG12320 FBgn0038590 FBtr0083605 2 1 1 60 3R 14078290 14078310 ATTGATCTTTGTGCCTACACC 58 14078250 14078268 CGGGTGGAATCATCTTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cbp20 FBgn0022943 FBtr0083551 1 1 1 80 3R 13990700 13990718 GTATAAGAAGACGCCCTGC 58 13990762 13990904 TTCACAAATCTCATGGCCG 58 NA Drosophila melanogaster 61 kuk FBgn0038476 FBtr0083398 2 1 2 170 3R 12908220 12908395 CAAATCTGTGAGATCGTGCA 58 12908528 12908546 CCAGAAGATTGCTGCAAGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3995 FBgn0038472 FBtr0083428 1 1 1 82 3R 12868443 12868461 GTGGGAGGAACTGTCATCC 59 12868323 12868398 AGTCCTTTAAGGCCCTTCTC 59 NA Drosophila melanogaster 61 ird5 FBgn0024222 FBtr0083236 1 1 1 81 3R 11873126 11873145 TCCTTTGCCTATGATCAGCT 58 11873009 11873082 GTGCACTGCTGATAAGCTG 59 NA Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 1 2 2 88 3R 11790852 11790872 AGGCTGAACTATTTGCTATCC 57 11790730 11790803 CAGCTCCTCTACCTTTAGTG 57 NA Drosophila melanogaster 61 Trax FBgn0038327 FBtr0083093,FBtr0083092 1 2 2 60 3R 11187864 11187882 CGACCAGGATGTCTACCAG 59 11187904 11187924 CTCGATAAACTCCTGCAATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14372 FBgn0038156 FBtr0100458 2 1 1 87 3R 9286160 9286752 ATCACGGTTTCGCATACAC 58 9286801 9286821 CATTTACGGCGAATATCACCA 58 NA Drosophila melanogaster 61 mthl12 FBgn0045442 FBtr0082746 1 1 1 80 3R 9179838 9179856 AAGGGAACAGTTTCAGCCA 59 9179898 9179975 AGTATGGATCCGTCCTTTAGG 58 NA Drosophila melanogaster 61 CG10096 FBgn0038032 FBtr0082603,FBtr0082604 1 2 2 80 3R 8217505 8217578 CGGGTGTCATAATTGCCAG 59 8217443 8217461 CGTAGAGAACTGCAATGGG 58 NA Nonspecific Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301723,FBtr0301722 2 3 3 80 3R 7866394 7866413 GAATTTAAGCGACCTTCAGC 57 7866454 7866532 ATCCTTATTGTCCTCAGAGGT 58 NA Drosophila melanogaster 61 CG18765 FBgn0042110 FBtr0113346 3 1 1 114 3R 7517415 7517434 AAGCAGATATCAGAGTTCCG 57 7517262 7517338 GTTTCTTGTTGTCTGCCAC 57 NA Drosophila melanogaster 61 CG18545 FBgn0037812 FBtr0082234 2 1 1 60 3R 6167058 6167078 GGATACATCTGGAAATCGTGG 58 6167100 6167118 CAACTTAACGCGCTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8412 FBgn0037743 FBtr0082130 2 1 1 80 3R 5582665 5582683 AGGAGAGCTTCAATCTCCA 57 5582724 5582805 GATAGTCATGGTGATCGTACTG 58 NA Drosophila melanogaster 61 CG18747 FBgn0042104 FBtr0273255 2 1 1 110 3R 3608532 3609022 CAAGGAGGTTCAAGCTGTG 58 3608440 3608459 GATAGATAATCCTCCCGGCC 59 NA Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 1 2 2 84 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365154 3365172 CACTGGAGCTCTTTACACG 58 NA Drosophila melanogaster 61 CG42537 FBgn0260645 FBtr0301001 1 1 1 108 3R 2203556 2203574 GGTTCTAGCTTGCGTTGTG 59 2203707 2203725 AAATCCTTCGTTCTTGCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG2046 FBgn0037378 FBtr0078668 2 1 1 60 3R 1619375 1619394 TCCCAACTTTATCGCTGGAG 59 1619270 1619288 CAATTCCATCTGATCCCGC 58 NA DesignNoJunction Drosophila melanogaster 61 tRNA:E4:62Ac FBgn0011853 FBtr0072687 1 1 1 60 3L 1398177 1398198 TGTCTAGTGGTTAGGATATCCG 58 1398219 1398237 CCATACCGGGAATTGAACC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11404 FBgn0037169 FBtr0078513 1 1 1 80 3L 22541791 22541811 AAAGCATGTGGGACTTTAACC 59 22541850 22541924 GCAAGGAGATGTGATAGATCTG 58 NA Drosophila melanogaster 61 Pc FBgn0003042 FBtr0078405 1 1 1 125 3L 21310930 21310948 AGTCGATCTAGTGTACGCG 59 21310509 21310527 ATGTTTACCTCCGGTTCCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10585 FBgn0037044 FBtr0078287 2 1 1 82 3L 21021991 21022188 CATCTGGTGCACAATAGCG 59 21022234 21022252 AACGACATGTCGTCGTAGG 59 NA Drosophila melanogaster 61 CG34260 FBgn0085289 FBtr0112454 2 1 1 80 3L 20708173 20708192 AAGTGCGACTGAAATTGCTG 59 20708235 20710051 CTTGTGGTGCTATCTGCAC 58 NA Drosophila melanogaster 61 CG7298 FBgn0036948 FBtr0074859 1 1 1 217 3L 20195799 20196021 ATCAAACTGCATACAACGTG 57 20195601 20195619 ACTGTCGTCGTAGTAGTCG 58 NA DesignRelaxed Drosophila melanogaster 61 Mtr3 FBgn0036916 FBtr0074918 3 1 1 81 3L 19906515 19906591 CCCAGAAACACCTTCATCC 58 19906452 19906473 GAACCTTGGTGTTACCATACTC 58 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 1 2 2 82 3L 17746409 17746576 TGTTCCCACGCTATATGAC 57 17746345 17746363 ACTTCTCCAAGGTTTCCAC 57 NA Drosophila melanogaster 61 TORC FBgn0036746 FBtr0075196 3 1 1 60 3L 17655460 17655478 TCCAACGCGGATTATACCA 58 17655418 17655436 CCATCTGTCCCAGATCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TpnC73F FBgn0010424 FBtr0089585,FBtr0089586 1 2 2 80 3L 17039306 17039324 GCTGATCAGACAGATCCCA 58 17039366 17039458 GGGTGTAAGATCTTCATCGAC 58 NA InUTR Drosophila melanogaster 61 CG3764 FBgn0036684 FBtr0075297 3 1 1 81 3L 16992892 16992911 CAAGATTCCGTCGAAGTCAC 59 16992639 16992849 TCGATTGTGCTTATAGCCGT 59 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075543,FBtr0075541,FBtr0075542 1 3 3 119 3L 15809126 15809144 AAGATAACGGGTCTGCTGG 59 15806716 15809043 AAGAATGGCAAAGAAGGCG 59 NA Drosophila melanogaster 61 CG7275 FBgn0036500 FBtr0075547 1 1 1 95 3L 15492986 15493063 GAGGATTGCAACCTTTATACCT 58 15493118 15493137 GTAGTCAACATCGGTGACAG 58 NA Drosophila melanogaster 61 CG4914 FBgn0036436 FBtr0075712 3 1 1 104 3L 14670521 14670539 CTCAGAACCAAACATCGCC 59 14668482 14668500 TCCATGGATACTCGCTGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14109 FBgn0036364 FBtr0075850 3 1 1 98 3L 13434302 13434320 CTCTTCTCCTCAGGAACCC 58 13434729 13434747 TCTGTTGGAAGCAGCTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14105 FBgn0036359 FBtr0075857 1 1 1 100 3L 13419259 13419280 GTGTCCTTTATCGTAAACTGGA 58 13419125 13419198 TTCCACCAACTGTTCTCTG 57 NA Drosophila melanogaster 61 sens FBgn0002573 FBtr0075862 2 1 1 89 3L 13390159 13390413 ATACATACCGGCGAGAAGC 59 13390088 13390106 GTGCTTCCTCATATGCGTG 59 NA Drosophila melanogaster 61 CG34429 FBgn0085458 FBtr0112730 3 1 1 102 3L 13056705 13056723 GTCTGTGTCCTGAAGAGCA 59 13056789 13056859 AGCTAGATGGTGTGAGCAG 59 NA Drosophila melanogaster 61 Or69a FBgn0041622 FBtr0075901 2 1 2 84 3L 12959915 12959934 ATATGCCAGTGGTCTAGTGG 59 12957721 12959870 TTTGCCACTAGCTAAAGTGAC 58 NA Drosophila melanogaster 61 CG33725 FBgn0053725 FBtr0113471 1 1 1 80 3L 12475746 12478921 AATTCCTACAGGATGCCGT 58 12478965 12478983 TGTGGAACACAAACCAGGA 59 NA Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 3 2 2 245 3L 12194027 12194045 TATCCGCGTCAGAAGAACC 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CAH2 FBgn0027843 FBtr0076001 1 1 1 116 3L 12173245 12174786 CTTGATTTGTGCTTCTTTGGTC 58 12174863 12174881 TTTATGGGACTCTGGTGCT 58 NA Drosophila melanogaster 61 CG6310 FBgn0036121 FBtr0076239 1 1 1 80 3L 11062394 11062476 TCTATTGCCTACAATCACTGAG 57 11062335 11062354 GATACTGGATGTTCTCCTGG 57 NA Drosophila melanogaster 61 CG11811 FBgn0036099 FBtr0076265 1 1 1 60 3L 10684906 10684925 GAATTCCGCAACTTTGTCGT 59 10684945 10684966 TAACTGATACTCCCTGCTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42455 FBgn0259932 FBtr0300238 2 1 3 64 3L 9965488 9966030 AAACAGCCAGAATGTCCCT 59 9966055 9966076 ACTAACAGAGGCTAATATGGTG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18179 FBgn0036023 FBtr0076388 3 1 1 60 3L 9632658 9632678 CTACGTGGAGATCCACTATGG 59 9632699 9632718 GACAGATTGCCTGAAAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13314 FBgn0035949 FBtr0076518 2 1 1 60 3L 8976046 8976064 CGCGGTTCTACAATGATCC 58 8976088 8976106 TTCGTGAGCAGTGATTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156,FBtr0301158,FBtr0089561,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089568 1 7 13 85 3L 8620820 8627690 TTGTGAATCAGCCCTACCG 59 8627738 8627757 CAAGTAGGACTCTGTCGTGG 59 NA Drosophila melanogaster 61 CG42661 FBgn0261537 FBtr0302559 1 1 1 102 3L 7459441 7459513 TAACCGCAGGAATTAATGGTG 58 7459572 7459595 GACAGGGATAGGCTTATAATAAGC 58 NA Nonspecific Drosophila melanogaster 61 MED4 FBgn0035754 FBtr0076889 2 1 1 236 3L 7243418 7243436 GAATTGGTGGACCTGTTGG 58 7243142 7243160 GTTGGCCTGATTGATGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11342 FBgn0035537 FBtr0073338 3 1 1 60 3L 4366997 4367015 TTTGATGCCATTTGCTGCT 59 4366955 4366976 CTTGATCATGGTGATTCAAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 VhaM9.7-1 FBgn0028664 FBtr0073256 2 1 1 105 3L 4186683 4186701 TTCTGTTCACCAAGCAACC 58 4186596 4186614 TTCAGTTGCGCCAAATAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp83 FBgn0001233 FBtr0073040 1 1 1 82 3L 3193360 3194512 CATACAAGATGCCAGAAGAAGC 59 3194552 3194573 GAATGTGTTGATGATCAGGGAC 59 NA InUTR Drosophila melanogaster 61 CG1139 FBgn0035300 FBtr0072845 1 1 1 99 3L 1973624 1973642 GCTTGTATGTTCTGCTCGG 59 1973704 1973780 TGAGCGGGTATTTCAGACTG 59 NA Drosophila melanogaster 61 5SrRNA:CR33388 FBgn0053388 FBtr0086380 1 1 1 60 2R 15640788 15640806 ATACATCGGTTCTCGTCCG 59 15640746 15640764 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16778 FBgn0003715 FBtr0072458,FBtr0100126,FBtr0072457,FBtr0072456 1 4 4 177 2R 20981953 20981973 GGTAAGGAGTTTGGAAAGGAG 58 20979238 20981814 GACCAAACATATGTGGCGG 59 NA Drosophila melanogaster 61 angel FBgn0016762 FBtr0072083 2 1 1 60 2R 19582364 19582382 ACACCTATCGTCCTGACTG 58 19582405 19582424 GGAATTCAATAGGCGAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3530 FBgn0028497 FBtr0072028,FBtr0112940,FBtr0072029 1 3 3 80 2R 19279307 19279325 CATTCCCAAGGACTCCGAG 59 19279178 19279266 TACAATTTGTTGATGGACACCG 59 NA Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0072013 3 1 4 187 2R 19274136 19274541 GAATCGTAAGACTTTGAAGAGC 57 19274688 19274707 CCATTATCTGGTCACGAGTC 57 NA InUTR Drosophila melanogaster 61 CG30417 FBgn0050417 FBtr0072041 1 1 1 60 2R 19214524 19214542 GCAACTTTGGAAACTTCGG 57 19214482 19214500 GCAGATCAAGGTCCTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr59a FBgn0045483 FBtr0071964 2 1 1 81 2R 18968966 18968984 GTCAGCGAGTACCAAATGC 59 18969023 18969108 CGTAGATCAAGTAAGAACTCAACTC 59 NA Drosophila melanogaster 61 CG30270 FBgn0061435 FBtr0300124 2 1 2 70 2R 18671844 18671862 ATCCAGAATGCAGTTAGCC 57 18671896 18671970 TTTCTACCGGTATCAGCGT 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Cyp6d2 FBgn0034756 FBtr0071928 2 1 1 80 2R 18541285 18541306 TACGTCTAGGGATGAATCTCTG 58 18541153 18541247 TTCATTAGCTTAGCAATCGGTG 59 NA Drosophila melanogaster 61 CG6018 FBgn0034736 FBtr0071835 2 1 1 81 2R 18437695 18437716 CGTTGAGATTAGGAAGCAATGG 59 18437755 18437841 CCTTATGGCCAATAATCTTGGC 59 NA InUTR Drosophila melanogaster 61 CG2921 FBgn0034689 FBtr0071800 3 1 1 84 2R 17962310 17962330 TATTGGATTGATCTCCAGGCT 58 17962191 17962264 ATCTCGATCGGGTTCTTCG 59 NA Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071718 2 1 2 107 2R 17691064 17691130 TTGGACAATTTGCAGGTCG 59 17691200 17691219 CTACCATTGGAGGACATCGT 59 NA InUTR Drosophila melanogaster 61 CG15124 FBgn0034461 FBtr0086470 3 1 1 60 2R 15530545 15530566 GGATAACGACAATATGCTCGAC 59 15530586 15530605 TATGTTCGGTAAGTCCTTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15086 FBgn0034374 FBtr0299528 3 1 2 158 2R 14567573 14567647 TACCAACGAGATGGCTACG 59 14567433 14567453 TTGGCCATAATCGTATGACTG 58 NA Drosophila melanogaster 61 GstE4 FBgn0063496 FBtr0086672 1 1 1 60 2R 14291210 14291229 CCTTTCTCGATGATCACGAC 58 14291252 14291270 ATGCTGAAATCGGCTATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 aft FBgn0026309 FBtr0089549 3 1 1 81 2R 13674237 13674310 AAGGATGAGATTAAATGGCGC 59 13674350 13674371 CGCTGATCATCTGGTTTATAGC 59 NA Drosophila melanogaster 61 CG9646 FBgn0034184 FBtr0086974 2 1 1 89 2R 12937673 12937750 AATTTGAGACTGAGGTGGAGG 59 12937800 12937819 GATAAACCGTCTCCTCCCAG 59 NA Drosophila melanogaster 61 CG9646 FBgn0034184 FBtr0086974 1 1 1 89 2R 12937672 12937749 AAATTTGAGACTGAGGTGGAG 58 12937800 12937818 ATAAACCGTCTCCTCCCAG 58 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087072 2 2 3 168 2R 12752526 12752605 AAGAATAAGCAGAACGGATCTG 58 12752379 12752397 ACTGTGCATACTGAGTGGG 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152,FBtr0087153 3 3 5 60 2R 12249825 12249843 CAGCACGATCCAGATTGTC 58 12249866 12249885 CGACAATTAGTCCTGCTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15708 FBgn0034099 FBtr0087188 1 1 1 186 2R 12129114 12129136 CTCTCGAAGATTAGCAAGATGAC 59 12128894 12128912 GACGTGAACATGGACATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15706 FBgn0034093 FBtr0087191 2 1 1 89 2R 12112208 12112287 CGATTATTTCACGAGCCTGC 59 12112138 12112156 TCGGGCAGGAAATAGAAGC 59 NA Drosophila melanogaster 61 CG30085 FBgn0050085 FBtr0087306 2 1 1 107 2R 11756316 11756422 GCATTATTGCAACATGATCGAC 59 11756230 11756249 ATATCTCCCAGCCAGAACTC 58 NA Drosophila melanogaster 61 Pms2 FBgn0011660 FBtr0087388 2 1 1 81 2R 11256036 11256056 GCTCTTAGCAGGAATACAACG 59 11255923 11255993 GTCCATGTGGACAGTTCCA 59 NA Drosophila melanogaster 61 CG8089 FBgn0033993 FBtr0087418 3 1 1 60 2R 11034097 11034118 CTGCCTAATATGCAAACTACCA 58 11034058 11034079 TTCCTTAGAGGTATGAGCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10253 FBgn0033983 FBtr0087428 2 1 1 88 2R 10818716 10818735 AAAGTTTCAGGGATTTCCGG 58 10818287 10818667 GTCCAAAGTCCCTAATGTAGG 57 NA Drosophila melanogaster 61 Rpn6 FBgn0028689 FBtr0087474,FBtr0087475 1 2 2 93 2R 10639146 10639229 GGCATTGAGGTTCAATTGTG 58 10639072 10639090 CAATCAGACGAGCTTCCAG 58 NA Drosophila melanogaster 61 CG30077 FBgn0050077 FBtr0301734 3 1 1 78 2R 10488854 10488873 ACTTCCATGGTTAAGGAGCA 59 10488972 10488990 CTATTGCCTCCTTTCGACG 58 NA DesignNoJunction Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290109,FBtr0100370,FBtr0290111,FBtr0100372,FBtr0100369,FBtr0290110 2 6 7 95 2R 10178691 10178710 ATTTCGTTCGAGAACACCTG 58 10178766 10178947 AAAGTGTACCATTTCGGTTCC 58 NA Drosophila melanogaster 61 Nacalpha FBgn0086904 FBtr0087860,FBtr0087858,FBtr0087859 2 3 3 61 2R 8647460 8647478 TATCGAGCTGGTCATCACG 59 8647417 8647435 TCTTCAGAGCCTTGATCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 skf FBgn0050021 FBtr0114569,FBtr0114570,FBtr0088196 1 3 3 98 2R 7117374 7117455 CTGGGATCCTGCTCTTTCC 59 7117294 7117313 GATTCAAGCAAGGCCTTCAG 59 NA Drosophila melanogaster 61 Gr47a FBgn0041242 FBtr0088352 1 1 1 80 2R 6250723 6250935 GCTTGGATCGTTTGCTCTC 59 6250976 6250997 AGGTAAACACGTTGAGTAAGAC 58 NA Drosophila melanogaster 61 CG34363 FBgn0085392 FBtr0290091,FBtr0290090 2 2 2 80 2R 6211561 6211642 GTATGGAGAACCAGATCTCCT 58 6211501 6211519 CGCCTAACATACATGGCAC 59 NA Drosophila melanogaster 61 CG12913 FBgn0033500 FBtr0088335 3 1 1 89 2R 6141453 6141471 GATTGGAGCAAGCTAGGAG 57 6141523 6141656 TTAAAGCTTTGGCCCTACTG 58 NA Drosophila melanogaster 61 babo FBgn0011300 FBtr0088658,FBtr0088659,FBtr0300599 2 3 3 90 2R 4847637 4847658 CATGGGCATGATATACGATGAG 59 4847707 4847790 GCAAACCACCTTCTTCATCTC 59 NA Drosophila melanogaster 61 CG11191 FBgn0033249 FBtr0088868 2 1 1 129 2R 3889249 3889439 TCCTGTCTGAAGTTCCTGC 59 3889138 3889156 CATCCAGCTCCAGATCTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30158 FBgn0050158 FBtr0086165 2 1 1 84 2R 2793790 2793809 CTACACGGACAAATATCGCG 59 2793854 2797446 GATGTCCACCTTTAGTGTGAC 58 NA Drosophila melanogaster 61 mir-100 FBgn0064160 FBtr0081064 2 1 1 60 2L 18471438 18471459 TAACAGAAACCCGTAAATCCGA 59 18471478 18471498 ATAATGCCGGTCTTGTAACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9987 FBgn0032781 FBtr0081205 3 1 1 86 2L 19432000 19432018 TTACGTGCTAACTGGAACG 58 19432128 19432146 TTGGCTCGAGATAGTGCAC 60 NA DesignNoJunction Drosophila melanogaster 61 CG17349 FBgn0032771 FBtr0081198 1 1 1 94 2L 19370652 19370670 TAAGACAAACGAACGTGCC 59 19370728 19370811 GAACTTCACGTACTGGCAC 59 NA Drosophila melanogaster 61 brat FBgn0010300 FBtr0081160 2 1 3 88 2L 19167697 19168104 ATTGGAAGGAGCTGTTACTCC 59 19168154 19168172 CAGAGATGGTGTCGGTGAG 59 NA InUTR Drosophila melanogaster 61 CG10383 FBgn0032699 FBtr0089628 1 1 1 95 2L 18693037 18693055 GAACTTCACGTGATGCTGG 59 18692900 18692979 AATGTCCTCAATGGGATCCT 58 NA Drosophila melanogaster 61 rdo FBgn0243486 FBtr0081029 2 1 1 80 2L 18062551 18063813 TGCGGATATTAGATCTGTCCA 58 18063853 18063873 ATTCCAGTAGGTTGTCCTGTC 59 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 1 1 4 215 2L 16622826 16652745 ATGTCCACGGAATACGGTC 59 16657510 16657528 GTAGAAATGCGAAGTGCCG 59 NA DesignNoJunction Drosophila melanogaster 61 cact FBgn0000250 FBtr0080844,FBtr0080845,FBtr0080846,FBtr0080847 2 4 4 200 2L 16314850 16322969 AACTACGATGGAGAACGCT 58 16314607 16314625 TTCCAGGTTCAGCTTCTCG 59 NA Drosophila melanogaster 61 vig FBgn0024183 FBtr0080719,FBtr0080718,FBtr0080721,FBtr0080720 3 4 4 83 2L 15065452 15066951 GTTCCGATAGAACTGGTGTG 58 15065388 15065406 CAATAGCCTCCTTGACCGA 59 NA Drosophila melanogaster 61 CG6043 FBgn0032497 FBtr0302140,FBtr0089911,FBtr0302141,FBtr0302139,FBtr0302138 3 5 9 88 2L 13267965 13271307 GAATTGTCGTATGGACAGCG 59 13271357 13271376 TTTGTCATCATCGCGTTCTG 59 NA Drosophila melanogaster 61 CG5853 FBgn0032167 FBtr0079894 1 1 1 80 2L 9941636 9941716 GTTGACTGTTCTGACTTTCCC 59 9941576 9941596 TAGGCTTTGAGTGAGTACCAG 59 NA Drosophila melanogaster 61 CG13090 FBgn0032054 FBtr0079683 3 1 1 61 2L 8517535 8517556 TGCTCTGTGTACAAGTAATCGA 59 8517578 8517678 GGATTCCATCATTGTGCGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 wg FBgn0004009 FBtr0079433,FBtr0079432 1 2 2 110 2L 7309622 7312841 AAATCGTTGATCGAGGCTG 58 7312915 7312933 TGCAGGACTCTATCGTTCC 58 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079426,FBtr0079428,FBtr0079427 2 3 3 114 2L 7032325 7032343 CCAGCTAGTGATAGAGCCC 59 7032085 7032104 CAGGAACTTGTAGTCCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Coprox FBgn0021944 FBtr0079352 1 1 1 60 2L 6965248 6965266 CACGATCCCACCTACTACC 59 6965290 6965308 GCTTGATGCGGAAGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11320 FBgn0031837 FBtr0113026 1 1 1 80 2L 6617359 6617440 ATTATAACCGTGCACCATAAGG 58 6617300 6617319 GACAATGAACTGACTTTCGC 57 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 2 2 2 100 2L 6033999 6034021 CACGGAATGGATTATATGGTGTC 59 6033866 6033939 AGAAAGCTAGCTCCCTTGG 59 NA Drosophila melanogaster 61 CG18269 FBgn0031719 FBtr0079103 1 1 1 60 2L 5552265 5552283 TTGGTACTCACCGAAGAGC 59 5552307 5552325 ACTCGTTGGTATCTGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14035 FBgn0031685 FBtr0079020 3 1 1 147 2L 5103458 5103478 CCGCAACCTAAATCCTATGTG 59 5103587 5103982 CACTGCTGTCTTGCAACTG 59 NA Drosophila melanogaster 61 jet FBgn0031652 FBtr0079057 1 1 2 96 2L 4948900 4948918 TATCTCCGACTATGGCGTG 58 4948696 4948714 CAGGGAGAGTTCTGTGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8813 FBgn0031476 FBtr0077628 2 1 1 60 2L 2870192 2870213 GTACCCGGAGGGTATTTATGAG 59 2870234 2870252 CTTGTTGGCGTTCTTGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8813 FBgn0031476 FBtr0077628 1 1 1 60 2L 2870329 2870347 GCTACGAGATGTCTAGCGA 59 2870370 2870389 GAGAAGCTGGTCTTGAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 3 2 2 83 2L 2810574 2810592 GATCAGCAGAAGGACTCCA 58 2810637 2811162 CTTCATCCACTCATCTTGCAC 59 NA Drosophila melanogaster 61 CG15358 FBgn0031373 FBtr0077892 3 1 1 79 2L 1883794 1883813 TATCAGGATGCTTGGAAGCT 58 1883184 1883755 TTCAAGATGGATTCAAGTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3645 FBgn0031238 FBtr0078140,FBtr0078141 2 2 2 83 2L 253880 253963 AGAGATTGTGAGCACACTG 57 253815 253833 ATGGTCTTCTCAAGGTCCT 57 NA Drosophila melanogaster 61 kis FBgn0086902 FBtr0078144,FBtr0078145,FBtr0299837 1 3 3 82 2L 215083 215104 GTGATCAATAAACAGACAGGCA 59 214931 215040 TTCTCCGTAAGCCATTGCA 59 NA Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 3 2 2 69 2L 8087 8108 GGTCAAGAAAGTCAGTGAAACC 59 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG4822 FBgn0031220 FBtr0100307,FBtr0100308,FBtr0100310,FBtr0078159,FBtr0078158,FBtr0078156,FBtr0078157 2 7 8 80 2L 119332 119351 TTTGGTAAACAACAGTCCGC 59 119219 119290 GAGTCCAGGACATCAGTCTG 59 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 3 2 4 126 2L 128931 130517 ATAATAATCTACTGGGCACAGC 58 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 Plc21C FBgn0004611 FBtr0078047,FBtr0078048,FBtr0078051,FBtr0078050 2 4 5 96 2L 344410 344428 AAATCCAGTCCGCTAGAGG 58 344484 344571 GCGGAGAAAGACAATTAAGACTC 59 NA Drosophila melanogaster 61 CG4415 FBgn0031296 FBtr0077951 1 1 2 187 2L 1038374 1038392 GAACGACAACGATGTGGTC 59 1038613 1038633 GTCATTCTTGTAGAACAAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7082 FBgn0031401 FBtr0077839,FBtr0077836,FBtr0077838,FBtr0077837 2 4 4 88 2L 2224613 2224633 AAATCTACCATCCAGACGGAG 59 2224683 2224759 TTTCTCCAATGTGCCACCT 59 NA Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077727,FBtr0077728 3 2 4 87 2L 2793386 2793406 AAGAACCAAAGATGGAAAGGG 58 2793256 2793341 CATATCAGGTTTCTCCTTGTACG 59 NA Drosophila melanogaster 61 CG3119 FBgn0031466 FBtr0077691 3 1 2 134 2L 2837350 2837368 TTCCTCAAGGCAGATGACG 59 2835534 2837195 TCCGCCAGACATATAACTCAC 59 NA Drosophila melanogaster 61 CG2983 FBgn0031472 FBtr0077620 3 1 1 62 2L 2848431 2848449 GGAAGTTCCTCGCCTACAG 59 2848534 2848552 ACGATACCGCATAGTTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 3 7 7 80 2L 2963120 2963232 GCAATCTGTTAAGGTGATTCG 57 2963273 2963292 TCTTCGTAATTCGTCATGGT 57 NA Drosophila melanogaster 61 CG9664 FBgn0031515 FBtr0077607,FBtr0077605 3 2 3 90 2L 3292518 3292536 TGAATCGCTCATCACTCAG 57 3292288 3292465 ATCTATCAAGGCTGTCTCCT 57 NA Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 2 2 2 80 2L 3463757 3463776 CCGCTAAATAATTTGCAGCA 57 3463644 3463716 GATATTGAAGCCCTGGTACTC 58 NA Drosophila melanogaster 61 msl-2 FBgn0005616 FBtr0077570,FBtr0077571 3 2 2 60 2L 3463739 3463757 AATCCCAGCATCCTTTGGT 59 3463645 3463717 ATATTGAAGCCCTGGTACTCG 59 NA DesignRelaxed Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 1 5 6 90 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 3 1 1 63 2L 4408585 4408605 TGAATCGTGGATATCGATGTG 58 4408473 4408491 CTATAGCCCACTGGAACAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 3 4 4 103 2L 4845328 4845346 GTAATTCGGGCAAGTTCCC 58 4845148 4845261 GATGCCCATTACTTTGCCG 59 NA Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077397 2 1 6 80 2L 4912768 4915055 CGAGGATGACGAAGTAACAG 58 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 His3.3A FBgn0014857 FBtr0079010 2 1 2 138 2L 5055489 5055507 GGACTTCAAGACCGATCTG 57 5055699 5055717 CTTGGGCATAATGGTGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 1 2 5 86 2L 5277992 5278010 CTTTGGCCAGTTCAAGGAG 58 5277171 5277943 AGTGAACGCTCAATGAAACC 59 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 3 3 3 80 2L 5770060 5770080 GTCTGGTCAAGAAGTTTCTCG 59 5769931 5770020 CCAATGGAAATACTCTGGGTG 58 NA Drosophila melanogaster 61 chic FBgn0000308 FBtr0079233,FBtr0079235,FBtr0079236,FBtr0079234 1 4 4 92 2L 5976671 5976690 CATTTACCTTTCCGGCACAG 59 5973662 5976616 GAAACGATCACGGCTTGTG 59 NA Drosophila melanogaster 61 stai FBgn0051641 FBtr0079196 2 1 3 148 2L 6101784 6121779 CTGTTGATACTGAAGCCACAG 59 6121889 6121907 AATCTCCTCGACGCTAACG 59 NA Drosophila melanogaster 61 Ddr FBgn0053531 FBtr0301305,FBtr0091497 2 2 2 96 2L 6273042 6273060 CGATTTGGAATGGGCACAG 59 6273120 6278690 GTTTGCAGGTTCCGATTGG 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0110778 1 1 3 91 2L 6720833 6721121 TGAGTGAGGTGAATGAGGC 59 6720760 6720781 CATGTTCTGAGTCTCGTAAAGC 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 3 4 4 85 2L 7499871 7499889 TCAGTGTGAACACGAAGCT 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 3 1 1 91 2L 7783877 7783896 TCCCTGGGTTTAATAGGCAG 59 7784003 7784021 TTAAGGGAGTTGGCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 3 2 3 129 2L 7805160 7805178 GTCAGGATGACACAAACGG 58 7804905 7805068 ATTCCTGTTCGCTATTGCTG 58 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 3 4 5 61 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896701 7896719 CAATCCAAGAACAGGACCC 58 NA DesignRelaxed Drosophila melanogaster 61 Tg FBgn0031975 FBtr0079534,FBtr0079533 3 2 2 109 2L 8026476 8026561 AGTTCAAGATCGCTGAAATTCC 59 8026630 8026649 TTCCTTGGACGTGAATTTGG 58 NA Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301170 1 1 2 81 2L 8317683 8317706 CTCATACCATCACATTTATCAGGC 59 8317346 8317646 CGTGTACATCTGCAGATAACAG 59 NA Drosophila melanogaster 61 CG14275 FBgn0032022 FBtr0079602,FBtr0079603 3 2 2 105 2L 8329757 8332320 GTTAACAGTGAATGCCATTCG 58 8332387 8332405 GTACTGGTTGTCCCTCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13390 FBgn0032031 FBtr0079723 1 1 1 87 2L 8376668 8376686 TACTGTCAGGTGGCATCAG 59 8376533 8376551 GTATCCTCTTGGCATCGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079657,FBtr0079656,FBtr0079654,FBtr0079653,FBtr0079655,FBtr0079658 2 6 6 83 2L 8387311 8387329 TTCGGCTACCTGAAGTACG 59 8387376 8387674 CACCAACTGGGAAAGTGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13091 FBgn0032055 FBtr0079684 2 1 1 60 2L 8519769 8519788 GAGGCACAGGATTTCTAGGA 58 8519886 8519905 CTTACATCCGTTGAACGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301039 2 1 4 112 2L 9135282 9135300 AACAATGACATCAACGCCC 59 9135376 9154668 GCAAGGATTGCATATCGGG 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 2 4 5 88 2L 9272528 9272549 GACGCATTAAAGAAGCAAATCG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 Eaat1 FBgn0026439 FBtr0079802,FBtr0079801,FBtr0079800 2 3 3 80 2L 9338454 9338473 TTGGTCTCATCAATCACCAG 57 9338514 9338600 GTAAGTAATGGCTCTGGTAGC 58 NA Drosophila melanogaster 61 Nckx30C FBgn0028704 FBtr0079926,FBtr0079928 3 2 2 135 2L 9733521 9742382 TATCAATGACACGCACAACG 59 9733405 9733426 CGCCACAAACATATAGATCACC 59 NA Drosophila melanogaster 61 me31B FBgn0004419 FBtr0079976,FBtr0079975 2 2 2 88 2L 10240584 10240690 AAACAACTGATGTGACCGA 57 10240741 10240760 TCCCTTCTCGAATATACCCA 57 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089735 2 2 4 160 2L 10264252 10264554 GGAAACACAAGTGCAGACG 59 10264808 10264826 CCAGGTACTGATACCGCAG 59 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994 1 1 2 85 2L 10341156 10341236 CCAATAAGTGCTCGTTGGC 59 10341285 10341303 CATGTCGGTTCGTTTCCAG 59 NA Drosophila melanogaster 61 CG31716 FBgn0051716 FBtr0080010,FBtr0080013,FBtr0080011,FBtr0080009,FBtr0080012 2 5 6 100 2L 10399597 10399615 AATGCATCAGGGAAAGCAC 58 10399676 10399776 GAATCGCGACATTTACAATACC 58 NA Drosophila melanogaster 61 CG34161 FBgn0085190 FBtr0112352,FBtr0301006 3 2 3 82 2L 10581366 10581437 TCTTCTTTCGCAAGCACAC 59 10581302 10581320 AACCGTTCCTTGAGTTGTG 58 NA Drosophila melanogaster 61 CG6509 FBgn0032363 FBtr0080246,FBtr0080247 1 2 2 80 2L 11511226 11511245 TCAACGGTGTATGATGAGGA 58 11510837 11511185 CACATACCTTAGAGTCTCTGC 57 NA Drosophila melanogaster 61 CG4970 FBgn0032364 FBtr0080239 2 1 2 280 2L 11518681 11518700 TGCGTCGATTTAAGTACTCC 57 11518943 11519018 TTCCGTTACAAAGCGAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 2 1 2 81 2L 11790187 11790205 GTGACGAGATTACCTGCGA 59 11790302 11790384 CCATCCAAATCCATATCATCTTCG 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 3 3 5 83 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271637 12271656 CTGTGTATGGGACTATTCGG 57 NA Drosophila melanogaster 61 nub FBgn0085424 FBtr0112642 1 1 2 80 2L 12614200 12622983 CAGGACCCAAATGATATCAGTC 58 12625458 12625477 GTTGTTATCATCGCAATCGG 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090019,FBtr0090024 1 2 17 97 2L 12736249 12737970 CATTTCAGGTTCTGGCTACC 58 12738030 12738048 CTGGGCGAAGTAGTACAGG 59 NA Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 1 2 2 169 2L 13308294 13308423 TTTACCTATGCCAGTGGCA 59 13308143 13308161 GGTCAGGTAGATCCACCAC 59 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080546 3 1 3 95 2L 13836346 13836366 ATGCCATATACGAACTGATCG 58 13836420 13891308 CAAACGAATCTTCAATGCAGAC 58 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 1 5 5 80 2L 14195780 14195801 TAATGTCATACACATGCTCGAC 58 14189222 14195741 TACAGGTTCAAGCTCATTAGC 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100590,FBtr0100593,FBtr0100591,FBtr0100589,FBtr0100594 3 5 5 80 2L 14616428 14616511 CGATCTGAAGAACCTGGTG 58 14616555 14616573 ACCTTTGGATTGATTGCCT 57 NA Nonspecific Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080702 3 1 2 80 2L 15093620 15093640 TGAGATACCACCGTACAAGAC 59 15093680 15094150 TTTATGTGTAGCTTGTCGCTC 58 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300933,FBtr0300934,FBtr0300935 3 5 9 83 2L 15258831 15258852 CAATAGCTACTCCGATTTCAGC 59 15258697 15258791 CGGGATAGATCACAATTCTTCTG 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 3 4 5 83 2L 15760332 15760410 GGATTACAGAACCTACACGT 57 15760268 15760286 TTTCTGCCTGGATAGTTGG 57 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090005 3 1 4 86 2L 16177730 16177750 CGAAGTCAGCATGAAGAAGAC 59 16177798 16178918 AAGACGCGAAATCTGTTCG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 3 4 16 104 2L 16777432 16778402 AAGATGCGCTATCAAATCCTG 58 16778468 16778486 CATATCGGGATCCAATGCG 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080905,FBtr0080897,FBtr0301829,FBtr0080907 2 4 16 104 2L 16777431 16778401 CAAGATGCGCTATCAAATCCT 58 16778467 16778485 ATATCGGGATCCAATGCGG 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080898,FBtr0080903,FBtr0080900 1 3 16 80 2L 16779139 16779159 AAGAAATGCACGAAGGTTCTG 59 16779198 16780558 GAAGAACACCTTTGTGTTACCC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 1 10 16 117 2L 16779838 16780560 ACACAAAGGTGTTCTTCCG 58 16780641 16780659 TTACGGGACAGGTAACCAC 59 NA Drosophila melanogaster 61 CG15134 FBgn0032621 FBtr0114502 2 1 2 115 2L 16905388 16905510 GGCTTAAATAAAGTCCACAGCA 59 16905586 16905669 GCACCGTATTCGAATTCCG 59 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969 1 1 2 80 2L 17370884 17370905 CACGATTCCCATACATTGACAG 59 17368371 17370845 AGCGCAGCAAATTAGATTCAG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 1 4 5 93 2L 17437485 17437503 CTTCACCATGCACAACCTG 59 17437315 17437431 CTGATTGTGCAGATGATTTGTG 58 NA Drosophila melanogaster 61 RpS26 FBgn0004413 FBtr0081090,FBtr0081089 3 2 3 287 2L 18443194 18443212 TTTCCCGAAACGTGAACAC 59 18442846 18442864 AGTGGAGCTTCGCATAGAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17325 FBgn0040993 FBtr0081102,FBtr0299685 2 2 2 60 2L 18813629 18813650 GCCTTCAAATACAATCAGATGG 57 18813668 18813689 AGAAGTGCAGGTTATTGAACTG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120 2 1 2 129 2L 18838787 18838892 GAGAAGACAGAAGAGCGCA 59 18838676 18838695 CTTTGTCCCGATCCCTATCC 59 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 1 3 3 86 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 vari FBgn0250785 FBtr0089947,FBtr0089946 3 2 3 82 2L 20790711 20791175 AAACTGACGTGCTACATGC 58 20790647 20790665 GGCAATCCAATATCCCTGC 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 2 7 7 80 2L 21119887 21119906 ATACACGTGAACGAGATCCT 58 21119949 21120074 GTGGTACATCACAACCGTG 58 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602 2 1 3 148 2L 21278421 21281142 GCTAATGAGGAATCCCAGCT 59 21281253 21281271 GATTGACCCGTGTCTCCTC 59 NA Drosophila melanogaster 61 nrv3 FBgn0032946 FBtr0081520,FBtr0081518,FBtr0081521,FBtr0081519 1 4 4 80 2L 21388772 21388792 CTTTGCCAGATCATATGCCAG 59 21388831 21388923 CTACATTTGTTTCATTGGGCCT 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 1 2 5 117 2L 21670616 21670636 GAACTTACACCCGTTAAACAG 57 21670466 21670537 CTATTAACGATCGCACCGT 57 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085957 2 1 3 103 2L 22325839 22363440 TTCTATAGATGCTGGCCGT 58 22363507 22363525 GGCGATAATGTCGATAGCT 57 NA Drosophila melanogaster 61 CG17493 FBgn0040010 FBtr0111255 3 1 1 121 2L 22443167 22443187 CTCGTATAGTCTATGCGACGT 59 22443329 22443347 TTTGGCAGGAACTGTAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111248,FBtr0111244,FBtr0111247,FBtr0111245 3 4 6 103 2L 22737489 22737509 TTGCTATGCAACCTTGATGAC 59 22737574 22741714 AAAGCCAGTTGACTCTCGT 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 Fis1 FBgn0039969 FBtr0273211,FBtr0273209,FBtr0086073,FBtr0273208,FBtr0273210 1 5 5 70 2R 1491749 1491767 TCAAGTTCGCTCCCTAGAG 58 1491466 1491484 CAACCACCATACCCTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)01289 FBgn0010482 FBtr0301420 1 1 7 113 2R 2616573 2617824 CGGCTTATAGATGAAATAGATGACG 59 2616484 2616505 GCATTGGAATGGTTTGTAATCG 59 NA Drosophila melanogaster 61 pk FBgn0003090 FBtr0089044 1 1 3 113 2R 3081433 3081451 GAAGCCGTTTAAGGATGCC 59 3081527 3096493 CTGATGGGCTCATTTGACTC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111067 1 1 59 80 2R 3240445 3240464 ACCGCGACATGGATATAGTG 59 3236461 3240406 CTTCGATGAACTTGTACCATCTG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082,FBtr0111057,FBtr0111059,FBtr0111083 3 4 59 89 2R 3219876 3230846 AAAGTCAACGTACCTCCCAG 59 3219806 3219824 ATCAGCCTTGCATTCAACC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050 3 1 59 109 2R 3242673 3242691 AAATTAGTGTGGGCGAACG 58 3236471 3242603 CTTGTACCATCTAAACGATGGT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081,FBtr0111069 3 2 59 80 2R 3229658 3229677 GATTCTATTCGTGTCACGCG 59 3219874 3229616 ATCTGGGAGGTACATTCACG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111090,FBtr0089020 1 2 59 80 2R 3249269 3249287 AACCAAACATCGTCTGACC 58 3238787 3249225 TTAAATCCCACAGGCTCTG 57 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0088871,FBtr0113053,FBtr0088872 2 3 4 190 2R 3872609 3872627 AATGAGTCCAATGACACGG 57 3870501 3872392 GACATACTCGGCCTTAACC 57 NA Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088866 3 1 2 133 2R 3928595 3928613 AAGAGCATTGCTAGCTCGA 59 3928786 3928804 CCAGTGAGATGTCCGAGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12769 FBgn0033252 FBtr0088828,FBtr0088827 1 2 2 80 2R 3942533 3943252 TATACCTATCAAACAGGAGCCC 59 3942474 3942492 GTATCGCTGCTTGGATCAC 58 NA Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 1 1 1 60 2R 4337512 4337534 CGACGATGTGATCATCTATTCAC 59 4337412 4337434 GAGAACGATTACATAGAGATCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14767 FBgn0040777 FBtr0088720,FBtr0088719 2 2 3 112 2R 4607432 4607450 TACACCGTGGATCTGAGTG 58 4607280 4607356 TCGAAGTTCTGGTAACGCT 59 NA Drosophila melanogaster 61 CG8740 FBgn0027585 FBtr0290115,FBtr0088712,FBtr0088713,FBtr0088711 1 4 4 105 2R 4645019 4645095 CCAAGGAGCTCAATGTATCC 58 4645163 4645181 AAGAAGCGCAGATTCTTGG 58 NA Drosophila melanogaster 61 Rya-r44F FBgn0011286 FBtr0088640,FBtr0088638 3 2 4 146 2R 4757938 4758092 TTCGATGGACACAATGTGAC 58 4759738 4759756 GTCCATCAGGAGTTCTCCG 59 NA Drosophila melanogaster 61 Ggamma1 FBgn0004921 FBtr0088645,FBtr0088648,FBtr0088649,FBtr0088646 2 4 5 95 2R 4788973 4788992 TTTAGCCCGTAGAGTTCGAG 59 4789854 4789873 GGATGATGACATTACGTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301193 1 1 3 129 2R 4898913 4899027 CTTTCCCGAATGATACCGC 58 4898802 4898820 AACAAGACCAGATCATGCC 57 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 2 2 4 143 2R 5119289 5119307 TCACGTAAACCGGATACCA 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 cbx FBgn0011241 FBtr0088453,FBtr0088452 3 2 2 121 2R 5752950 5752969 ATCACAACCATACAGCAGGA 59 5752717 5752797 AAGACTCCAAACCACTGCA 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0088437,FBtr0088439 1 3 5 83 2R 5884116 5885216 GCTAGCATTCCTCGATGTC 58 5884051 5884069 TCGTAGTCGTCAATGTTGC 58 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0088344 3 1 17 80 2R 6187757 6192132 CATGGTGACCTTTAAAGACGT 58 6192173 6192192 TCCTCTTCCGACAAGTTCTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089345,FBtr0089343 1 2 26 94 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6393564 6419549 GCGTAATACTCAGATCTTGGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 3 26 26 85 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420947 6420965 GCAGCTCTTGGTACTTGAC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088282,FBtr0100605 2 5 12 89 2R 6449615 6449634 GACATTATCTTCACCGACCT 57 6449686 6498063 CAAGAGGCCCTGTAATTCC 57 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0300578 1 1 2 117 2R 6604805 6604823 AAATGGAGGATCCCGACAC 59 6604904 6607313 ATATTCCGCCTCTGAGTCG 59 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 3 2 2 80 2R 7837686 7843102 CTATACAAGGAGCACATTCAGG 58 7843143 7843161 GAAGACGATCACTTTGGCC 58 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 1 2 2 85 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877122 7877142 TGATTTACGATACCGATGGCA 59 NA Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088024 2 1 3 115 2R 7914644 7914735 GTCAATAGATTAGTGTGCCGC 59 7914549 7914568 AGTTTGCAATCGATTGGCTG 59 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 3 2 2 88 2R 8087083 8087346 GTGTTCAGAGATGTTGAGCA 58 8087014 8087032 ACTTTCAGGACGTTGAAGC 58 NA Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 3 1 3 265 2R 8225469 8225487 TAATACGCGAGGAGTGTCC 59 8226207 8226225 TCAGGATCTGGTCGTTCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 3 8 8 91 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560466 8560484 CGAAACTCGTAAAGTCGGG 58 NA Drosophila melanogaster 61 Taz FBgn0026619 FBtr0087864,FBtr0087862,FBtr0302455,FBtr0087863 2 4 4 135 2R 8641314 8641406 CTTCATGTTTGGCAAGTGC 58 8641197 8641218 CTTATCCATGTTCACCTTACCT 57 NA Drosophila melanogaster 61 CG13322 FBgn0033784 FBtr0087804,FBtr0087805,FBtr0087803 1 3 3 100 2R 8822744 8822762 ATAGACAGTATCCGGGTGC 58 8822606 8822683 AGACCAAATCGGAATGTAAAGC 59 NA Drosophila melanogaster 61 Fsn FBgn0043010 FBtr0087762,FBtr0087763 3 2 2 65 2R 9108955 9108973 CTACGAGTTCCTCGGTGTG 59 9108845 9108864 GCGGATACTGTGGGATAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 bbc FBgn0033844 FBtr0087699 3 1 2 86 2R 9378998 9379016 TGACAGAGGCTCAGTTCTC 58 9378367 9378948 CAATGCCGATCTTGGTGAG 59 NA Drosophila melanogaster 61 CG13335 FBgn0033857 FBtr0087679 2 1 2 137 2R 9460026 9461301 ATTCAAACTGATGCAGAGCT 57 9459908 9459926 ATCTTCGCGTCATATTGCC 58 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100452,FBtr0100453 3 3 3 247 2R 9842526 9842544 TTGCCCTGATTGATTCAGC 58 9842925 9842943 TTCCTTTGTGCTTCCTCAC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087442 3 1 2 140 2R 10659038 10659058 CAATACGACCAATTTGTGGAC 57 10659317 10659335 GTCTTGGCCTTGGTAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 kn FBgn0001319 FBtr0301400,FBtr0087465,FBtr0112810 2 3 4 86 2R 10661508 10662487 CAATTCCACGTCAAGGGTC 58 10661440 10661458 ACCAGTTGGGTGCTATAGC 59 NA Drosophila melanogaster 61 kn FBgn0001319 FBtr0112809,FBtr0087465,FBtr0112810 3 3 4 102 2R 10662964 10663052 TCTATGTCTCAGCTCTCAACG 59 10662882 10662900 TCTTTCTGGAGCTTCTCGG 59 NA Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404 3 1 2 130 2R 11088420 11088501 TGTCGCAGATGATATTCTTCG 58 11088310 11088331 GAACATGGTTATGGATAAGGCA 58 NA Drosophila melanogaster 61 SRPK FBgn0026370 FBtr0087384,FBtr0087383 2 2 3 80 2R 11269850 11269868 ACCAGGAGCTTATGGAGGA 59 11269909 11270919 CATGGTAGCGATCATGAAACAG 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 2 7 7 125 2R 11550672 11550751 GTTATCAATGCACAGGGCC 59 11550565 11550584 GTACCGATACTTCTTGCCGA 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 1 3 7 91 2R 11545901 11546127 CTCACAAGCCATGTATCCG 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 3 4 4 81 2R 11747748 11747766 AACTTCCTCGAGATCCACG 59 11747610 11747703 CTGCTCTAGATCTAGGCCC 58 NA Drosophila melanogaster 61 bdg FBgn0034049 FBtr0087298,FBtr0087299,FBtr0087300 1 3 3 80 2R 11812822 11812840 ACTCTGCCGTTAGTAGCTC 58 11812698 11812781 AAAGATGTTCTGTATCCTGCTG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 1 8 13 82 2R 11835563 11835581 CTAACAAACCTCCGCTTGC 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 CG7997 FBgn0034117 FBtr0087172,FBtr0087171 3 2 2 89 2R 12229045 12229063 AGGATCTGTACGATGCCAG 59 12228915 12228993 AGAAAGTTACGCCATTGGGA 59 NA Drosophila melanogaster 61 CG6262 FBgn0034121 FBtr0087151,FBtr0087152 2 2 5 112 2R 12249021 12249226 TCGAGAAGTACTACTGCGA 57 12249302 12249320 GTACTTGCAGAGGAACTCG 58 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0100603,FBtr0301868,FBtr0100601 2 3 4 61 2R 12304382 12304463 TACAATAAGGGCCTTGCGT 59 12304339 12304357 ATCAATCCCATGATGCCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087028,FBtr0087027,FBtr0087031,FBtr0087029,FBtr0087030,FBtr0087026 2 6 6 80 2R 12676157 12676302 CTACTACACTATAGCAGCCTCG 59 12676343 12676361 TCCAACTGCTTGATGGAGG 59 NA Drosophila melanogaster 61 CG5522 FBgn0034158 FBtr0087029,FBtr0087030,FBtr0087026 1 3 6 197 2R 12677408 12677666 GTCTGGGCACCAAATTTCG 59 12678299 12678317 TCGGATCAAGTTCCAGGTG 59 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 2 3 4 147 2R 12747152 12747174 CGGATATGTCAAAGAGATTCTGG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 1 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968 3 1 2 82 2R 12912785 12912870 CACGGAGTCTGTCATCTGG 59 12912914 12912934 TCAAAGCCGACAATGTATTCC 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923,FBtr0086924 3 3 3 174 2R 13358561 13358686 AACATCCCAAGTTCAACTTCG 59 13358822 13358840 TTGAGGTGAGCGTACTTGG 59 NA Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 1 2 2 80 2R 13679579 13679598 GATATCCGCTCTTTGCTTCC 58 13679638 13679722 TTTGCAGCAGGTCATTATAGAC 58 NA Drosophila melanogaster 61 CG15088 FBgn0034381 FBtr0300864,FBtr0300863 2 2 2 80 2R 14616059 14616077 TCTACGGTGTCTCCTTCAC 58 14615932 14616017 AGCGATTAACTCCGTAAATCC 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 1 2 3 86 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911807 14911825 AGGCTATCAGATGGTGCTG 59 NA Drosophila melanogaster 61 5-HT1A FBgn0004168 FBtr0086578,FBtr0086577 1 2 2 81 2R 14996381 14996399 GATCCAGACTATCTGCAGC 57 14996444 14996531 AACAGGTGGCAAATACCTG 58 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0086506 3 1 4 113 2R 15124469 15124487 AAAGGTGGCTAGGAAGAGC 59 15124563 15124846 GACTGTCGCATCAACTTCTC 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086509 1 2 4 97 2R 15130002 15130020 ATAGCGTTTCCTCGACCAG 59 15130078 15130217 CGGAGATTTCTGGTTATCTGTG 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086509 2 2 4 98 2R 15130001 15130019 GATAGCGTTTCCTCGACCA 59 15130078 15130217 CGGAGATTTCTGGTTATCTGTG 59 NA Drosophila melanogaster 61 isopeptidase-T-3 FBgn0028372 FBtr0086474 1 1 2 85 2R 15558793 15558877 TTTCTCAGGAAATCAGCCCA 59 15558925 15558943 ATAGATTCACCTGGCCTGC 59 NA Drosophila melanogaster 61 CG30389 FBgn0050389 FBtr0071633,FBtr0071632 1 2 2 80 2R 17037702 17037783 AAGTGGAACAAGAGTACCG 57 17037640 17037661 TTAATAGAATCTCGGGATCAGG 57 NA Drosophila melanogaster 61 Pu FBgn0003162 FBtr0071578,FBtr0071580,FBtr0071579 1 3 3 81 2R 17069022 17069041 CTTCTACGGCAAAGTTTCCA 58 17069085 17069162 TATTTCGACAATGCGTGCC 59 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071661 2 1 2 165 2R 17540061 17542290 GTACAAAGGCGTCATGCAG 59 17542481 17542499 CTGTCCATTCTTGTGCACC 59 NA Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 2 2 2 60 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556933 17556954 AAGTCTTGAATTTCCTTCGGAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 1 3 3 82 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608822 17609371 CGATGATACCTCGGAAACCT 59 NA Drosophila melanogaster 61 CG10384 FBgn0034731 FBtr0300682,FBtr0300683 1 2 2 114 2R 18354441 18357097 TTTCTGGTTCCGGACTACC 59 18357175 18357193 TAGGGCTATGCGAATCCTC 58 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273317,FBtr0273316,FBtr0273314,FBtr0273318 1 4 5 80 2R 18598042 18598062 TCATCATTGGATTCAGTGCAG 58 18598104 18598215 AGTTCTTGTGGTCCTTGCT 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273316 1 1 5 83 2R 18599850 18599925 ATTTCGGCACTTTCACGTC 59 18599972 18599990 GATGTAGCGCTTGTTCAGG 59 NA Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 2 2 2 60 2R 18780330 18780352 CCCGAATTGAGCTACTATATGAG 58 18780370 18780459 TCTTCCCACTAATTGTGTCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302773,FBtr0302774,FBtr0302768 2 3 13 84 2R 18817769 18817787 CTGTGAGTGGTCTCAGTCG 59 18817834 18819048 ATGGATTTGTCCTCATTGCG 59 NA Drosophila melanogaster 61 CG9849 FBgn0034803 FBtr0071951 2 1 1 63 2R 18825640 18825658 ACGCCAGAGATCTGAATGG 59 18826014 18826033 TTCGTGAGGAAGGAACACTC 59 NA DesignNoJunction Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 2 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 3 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 Ca-P60A FBgn0004551 FBtr0072213,FBtr0072218,FBtr0072215,FBtr0072212,FBtr0072216,FBtr0072211,FBtr0072214,FBtr0072217 1 8 8 80 2R 19817072 19817090 GGCTGATTGGATCAATGGC 59 19816942 19817028 CTTGGAAGACGGTGGAGAG 59 NA Drosophila melanogaster 61 CG3376 FBgn0034997 FBtr0072265,FBtr0072266 2 2 2 88 2R 20150927 20150946 GCTGAACATGAACTACTGCA 58 20150994 20151069 CGTAAATGAACCATTGTAGCTC 57 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 2 6 6 81 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287801 20287822 CAGATTTCTGTTGATGAAAGCG 58 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 1 3 3 80 2R 20398310 20398390 ACGATATTCGTAAGGTGTTGG 58 20398250 20398270 GACTGATGAGTTCCTCAATGG 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0072379 2 2 3 124 2R 20721067 20721160 CACAGTGGCGGTAATAACG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 CG30424 FBgn0050424 FBtr0113375 1 1 3 161 2R 20853665 20854677 ACGATATGGAACCAGAGTCC 59 20853459 20853477 TTTCCCAAACTTGATCCCG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 2 9 9 80 3L 143206 143522 TTTGTCCATACGCCAAATCG 59 143564 143583 GTTCTCAATAGCTTCCGACC 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 3 5 9 120 3L 135828 135970 AGTATCTGACAAACGGCCA 59 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072464 2 1 9 91 3L 129881 135472 CTATCAAGATCAACGGTACACAG 59 135523 135541 CGATGCTACCGTGATTACG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 1 5 9 89 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136024 136042 AACATTCTGCAATGCGGTG 59 NA Drosophila melanogaster 61 Mtch FBgn0027786 FBtr0072477,FBtr0072478,FBtr0072479 2 3 3 80 3L 185058 185138 GAACATCTTTCAGTACGCTGG 59 185178 185198 ACCAATTTAGGAGCTAGACCG 59 NA Drosophila melanogaster 61 mri FBgn0035107 FBtr0072481,FBtr0072480 3 2 3 129 3L 201053 201182 GAACCTAAGAGGCCTTCTCC 59 201274 201292 AACGTGACACTCTCGATCC 59 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299982,FBtr0299984 3 2 10 153 3L 300965 300985 GAACTGAAAGTACGGATGTGG 59 301100 301172 ATCATAGGTGCTACTGCCG 59 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0072565,FBtr0112807,FBtr0110818 3 3 4 80 3L 436272 436292 CAGGAGTTCCATAAGCATCTG 58 436150 436230 CGTGTTGATTCTGGCATCC 59 NA Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 3 2 2 111 3L 987333 987351 GAACTACGGCACCAATCTG 58 987426 988753 GGAACGAACAATCCTTCCG 58 NA Drosophila melanogaster 61 scf FBgn0025682 FBtr0089942,FBtr0089940,FBtr0089941 1 3 3 75 3L 1299144 1299162 CTGTCTACGGCTTCATGGA 59 1299319 1299337 AGGCTCTTGTAGCTGACTC 58 NA DesignNoJunction Drosophila melanogaster 61 stet FBgn0020248 FBtr0072713,FBtr0072712 2 2 2 105 3L 1476660 1476678 GTATACGCTTTGCTAGCCG 58 1476514 1476591 CGAAGGAAACGAAGACCAG 58 NA Drosophila melanogaster 61 Psa FBgn0261243 FBtr0072702,FBtr0072699,FBtr0072700,FBtr0072698,FBtr0072701,FBtr0072697 2 6 6 96 3L 1520680 1520698 TAGTGGACCCGAAGAACAC 59 1520758 1521146 GTTACCAGATTGCCGAACC 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 2 5 5 99 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743974 1743992 CTTGAGCAGAACAGGATCC 57 NA Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072772 1 1 2 81 3L 1748358 1748435 ATCAGTGCTATTTCGTGTCAC 58 1748478 1748496 AACTAGCGGATGAGGAAGC 59 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857 1 1 3 125 3L 1945523 1945660 AAAGTTGCATCAGGGACTG 58 1945361 1945379 AACGCCTTCAATCTGACAG 58 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858 1 1 4 80 3L 2129093 2129116 GTGGTCAAGACTATTGTCTATGAG 58 2128743 2129057 CTGAATTTGTTTCTGCACTTCG 59 NA Drosophila melanogaster 61 CG15822 FBgn0035308 FBtr0300831,FBtr0114630 2 2 2 106 3L 2154400 2154489 GAAGCATTGAGGATTGGCA 58 2154312 2154331 GGCTGTTTGAAAGGATGAGG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 prominin-like FBgn0026189 FBtr0073120,FBtr0073119,FBtr0073118 2 3 3 80 3L 3120509 3120530 GGCTCATTATTGGATGGTTCTC 59 3120392 3120468 TAGCAAACGGCAATGAACG 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 1 3 3 80 3L 3150144 3150225 GTACTTTCAGGCTTTGTTCAC 57 3150266 3150285 TTTAGGTCATCGTACTGCAC 57 NA Drosophila melanogaster 61 RpL28 FBgn0035422 FBtr0073095,FBtr0073096 3 2 6 84 3L 3221975 3222799 TAAACCTCGGAGACGTGAG 58 3221909 3221928 CTTCTTCAACAAGAAGGCGT 58 NA InUTR Drosophila melanogaster 61 ida FBgn0041147 FBtr0073160 3 1 2 67 3L 3905509 3905530 CGTGTTGATATTGCTCAAACAG 58 3905619 3905638 GCATGGATATCCCAGTATCC 57 NA DesignNoJunction Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267,FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 3 6 6 111 3L 4126918 4126996 TCTCGAGGAGATTAACAAACTC 57 4126828 4126846 GGTGGACATAAGGTTTGCA 58 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 3 3 3 100 3L 4224997 4225015 TCAAGTGGGAGGATATGGG 58 4224840 4224935 GTCTTCCTCATTAAGTACGGG 58 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 3 3 3 92 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247503 4247522 AACATCAAAGTCGAGGACCA 59 NA Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 1 2 2 80 3L 4287377 4287472 GGATGCCACAACATACAAGAC 59 4287511 4287532 CGCATGAATTTCACAATCTTGG 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0073359 3 1 2 89 3L 4811657 4812065 GAACATAACCGATGATGTTCGA 59 4811589 4811607 ATACTGGCGCGATTAACCT 59 NA Drosophila melanogaster 61 tow FBgn0035719 FBtr0076895,FBtr0113150 3 2 2 218 3L 6939647 6940354 AAGATTGATGAGGGTCCCG 59 6940536 6940554 AGAAGGCTGAATCAGCAGG 59 NA DesignRelaxed Drosophila melanogaster 61 mp FBgn0260660 FBtr0301109 3 1 11 80 3L 7012986 7027610 AGCTAGGATTCAGGATGATGG 59 7027748 7027766 TTCGCTTCCGTTGAATCCT 59 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 2 5 5 131 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365692 TTTACGACAGGTAGCTAGGC 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076777,FBtr0076780 3 2 7 142 3L 7811314 7813098 CAAATCAAACGGCAAATCCAC 59 7811192 7811210 CATAGGGCAGGGTCTTGTC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076773,FBtr0076774 1 2 5 137 3L 7895364 7896303 TGGAAACTCATTCTGGGACC 59 7895246 7895264 ATCCTTCTTGCGTATGCCT 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076773,FBtr0076774 3 2 5 139 3L 7895365 7896305 GATGGAAACTCATTCTGGGAC 58 7895246 7895264 ATCCTTCTTGCGTATGCCT 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 3 4 5 86 3L 8092628 8096003 GTCATTAAGGAAGCCCTCTC 57 8096052 8096070 TTGCACCGTAATACTGGAG 57 NA Drosophila melanogaster 61 Idh FBgn0001248 FBtr0114548,FBtr0076668,FBtr0076667 2 3 9 107 3L 8353912 8353933 GCTCTAACATTCTAAATTCGGC 58 8350939 8350957 AAATGATGCGGGTCATCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cbl FBgn0020224 FBtr0076614,FBtr0076615 2 2 2 103 3L 8418955 8419517 GGTAACAGCACATTGGTTCC 59 8419582 8419601 TCGATAGTGGTCTTTAGGGC 59 NA Drosophila melanogaster 61 Prm FBgn0003149 FBtr0076593,FBtr0076594 2 2 4 105 3L 8738136 8738154 AATACTCCTACCGTGCCAC 59 8737418 8738067 AAACGGATCTTGTCCTCCA 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209 3 1 2 84 3L 8889678 8889696 GAACAGATTGAGGCCAAGC 59 8889435 8889631 GTGTTACCATGGTGTTCACC 59 NA Drosophila melanogaster 61 CG5288 FBgn0035950 FBtr0076553,FBtr0076555,FBtr0076554 1 3 3 80 3L 8977956 8977976 TTCAACTCAGAAATCTCGAGG 57 8977751 8977915 TCTTTGGAAGCTCGATTCTG 58 NA Drosophila melanogaster 61 bol FBgn0011206 FBtr0300462,FBtr0076541,FBtr0076539,FBtr0076540,FBtr0076538 1 5 5 124 3L 9101076 9101094 TACCCATGGATCAGTTCGC 59 9100467 9100729 GGGTACATTCATTGGCACAC 59 NA Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG8336 FBgn0036020 FBtr0076384,FBtr0076386,FBtr0076385 2 3 3 123 3L 9624228 9624300 ACAAGTTCACAGGAGATGG 57 9624387 9624405 TAGTATCGATTCGCCTTGC 57 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 3 7 12 115 3L 9774310 9775718 AGCCTGCAGAATTTGTCTG 58 9775795 9775815 TACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 CG33205 FBgn0053205 FBtr0076331,FBtr0076333,FBtr0076335 3 3 8 184 3L 9817721 9817740 AGAACAACAAGCCAAATGTG 57 9823879 9824112 TATAAATGGGACCCTGAGGT 57 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 1 3 3 80 3L 10889924 10889946 TCTACGACAAGGATGGATTTAGG 59 10889712 10889884 TTACCAAGAGTACCTCCGC 58 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076245,FBtr0076244,FBtr0076243,FBtr0076246 2 4 4 80 3L 11030771 11030789 TTTGGCTTCCTGAAGTACG 57 11030643 11030727 GGATTGGGCCAACTTATCC 58 NA Drosophila melanogaster 61 CG6327 FBgn0036115 FBtr0076244,FBtr0076243,FBtr0076246 1 3 4 80 3L 11032852 11033105 CAATCCAAGTTCATACGTTCG 57 11032792 11032810 AGAGATTACCAACGGAAGC 57 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0301967 2 1 5 87 3L 11109588 11109768 CAATTGTCCGGCTAGTCCA 59 11109453 11109542 CAGATCCTGTGTATTGTTGTTACC 59 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 1 3 3 86 3L 11171620 11171755 GCAGAGATATTCTCACGTGG 58 11171553 11171571 GGTTCGTGTTCTTGTAGCG 59 NA Drosophila melanogaster 61 CG7394 FBgn0036173 FBtr0076098,FBtr0290024 1 2 2 80 3L 11556187 11556412 CGTCCAAGATAAAGATTAAGGACG 59 11556449 11556469 CCAAATAGGGAGATCCTCCTC 59 NA Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075 2 1 2 122 3L 11825336 11825981 GGAAAGTTCAGGTCTTCCG 58 11825232 11825250 CCTCATACACGGAGAAGGT 58 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 2 2 3 83 3L 12838946 12840160 AATTAGCCACGGAACTTCG 58 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 3 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 1 4 4 106 3L 15486641 15486659 TTTCCTGGCACCACTAAGG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333,FBtr0300757 1 2 4 129 3L 15486662 15487667 GGTACAAATGGTTAGATCGCG 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 CG6151 FBgn0036533 FBtr0075541 2 1 3 111 3L 15806427 15806447 CATTCCGCCCATTATTCTGTG 59 15805988 15806354 TCGAGAAGCTTTCTTGCCT 59 NA Drosophila melanogaster 61 CG42514 FBgn0260388 FBtr0300655,FBtr0300656,FBtr0300657 2 3 3 65 3L 16485800 16485818 ATTGCCATGCTATTGGCTG 59 16485591 16485772 AATGATTGTCGTATCCCTCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075305,FBtr0113174,FBtr0075300 3 3 10 87 3L 16922174 16922198 CTATGAGGATGTTAACGATAGTGTG 59 16922046 16922129 AATCGAAAGACCCACTGGT 59 NA Drosophila melanogaster 61 CG14057 FBgn0036696 FBtr0075286,FBtr0300718 3 2 2 89 3L 17037746 17037822 GATTACTTTGATCGGAGATGTACG 59 17037680 17037701 TGCTTGACTATGAACTTGTTGC 59 NA Drosophila melanogaster 61 Eip74EF FBgn0000567 FBtr0100411,FBtr0075204 1 2 4 162 3L 17558813 17567900 GCGATATTACACCGAAATTCC 57 17558671 17558689 TTGCTCCGTCTTTATGTGG 57 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075149 3 1 4 84 3L 17991577 17991596 GTACATCAAGTCCTACCCAG 57 17986086 17991532 GCCATCGAATTCTATGTTGAG 57 NA Drosophila melanogaster 61 CG18233 FBgn0036795 FBtr0075103 2 1 1 60 3L 18599379 18599397 CTTTGCAACAGCTGTAGCC 59 18599484 18599506 CTCATTAGTCAGTCCTTGATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 Indy FBgn0036816 FBtr0075083,FBtr0301857,FBtr0075082,FBtr0075081 2 4 4 80 3L 18823421 18823439 TTGTGATGTACTTCACCCG 57 18823041 18823379 TAGAGTTACGAATGTCCTTGG 57 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075011 1 1 12 89 3L 19294003 19294078 GATTGTCTACCCTTTAATTCCCAC 59 19293937 19293955 CTCTTCCCAAGTACCCACC 59 NA Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 3 3 3 93 3L 19790274 19790292 GTACGATCTGAGCGACTCC 59 19790346 19790436 TCGATATTGCTTAATGACGTGG 59 NA Drosophila melanogaster 61 cyc FBgn0023094 FBtr0074924 3 1 1 66 3L 19807934 19807954 TATCCTCACTGGAACAGTGTC 59 19807818 19807836 GTCTTAACGGGCAACATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 1 2 2 80 3L 19904553 19904574 AAGATAAGCATACGCCAAACAG 59 19904615 19904687 TTTCAAGGGCTCATTTGGC 59 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 1 3 3 80 3L 19992279 19992404 AAGAGCATCTTCATATGGTACC 57 19992220 19992240 AATCATGCAGGAGTTCTTCTC 58 NA Drosophila melanogaster 61 CG7433 FBgn0036927 FBtr0074908,FBtr0302049,FBtr0074909 2 3 3 95 3L 19992456 19992474 CATAGCTCCGAAAGGACTC 57 19992275 19992400 TTCTGGTACCATATGAAGATGC 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 1 4 4 177 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200638 TCAACTGATTCTCCAGATACTG 57 NA DesignNoJunction Drosophila melanogaster 61 Eip78C FBgn0004865 FBtr0078308,FBtr0078307,FBtr0078306 2 3 3 81 3L 21257019 21257037 AATGAGGCGACATTGACAC 58 21257079 21257158 TGACAAAGTCAGAATCGTAGAG 58 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389 2 3 4 117 3L 21488959 21489529 GAAGTGATTCTGTGCAGCA 58 21488860 21488878 GATAGGTAGGTGGACGAGC 59 NA Drosophila melanogaster 61 CG11489 FBgn0025702 FBtr0112914 1 1 2 89 3L 22268528 22271930 TTCGTCAGTCTATCGGAGC 59 22271981 22272001 GTCTGAAACGTAAAGACTGCT 58 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 3 4 4 88 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709222 22709241 ATTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 3 4 4 88 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709222 22709241 ATTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 SPoCk FBgn0052451 FBtr0078533,FBtr0078531,FBtr0113437,FBtr0078532,FBtr0302134 3 5 5 119 3L 22771914 22776527 CTTGGCCATTGCGAATCTC 59 22776610 22776628 AATACGCTCACGTTGTTGG 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 3 7 7 84 3L 22862818 22862837 CTTTACAGTGTGGGATGTGG 58 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 slif FBgn0037203 FBtr0078555,FBtr0078556,FBtr0078557 3 3 3 81 3L 22885586 22885672 ATCTTTGCGTCCATAATGGC 59 22885715 22885734 TGTATGCTAACAGGGTTCCG 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0078964 3 1 2 95 3R 23272 23465 AATCAGAATGGCTCCCTGAC 59 23523 23541 GACGTCGTTGTAGGAGTCC 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0113339,FBtr0301770,FBtr0113338,FBtr0078900,FBtr0113341,FBtr0113340 1 6 21 174 3R 110122 120863 GTTAAAGGAGGTGATGGAGG 57 120999 121299 TGATGTTGTACTTATCGCGA 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089951,FBtr0089949,FBtr0302613,FBtr0089950,FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 10 10 80 3R 562838 562911 AAATGAAGTAACGAGGTCCGA 59 562778 562796 ATACGCTTGATCAGAGCCT 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 1 12 19 90 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 Rheb FBgn0041191 FBtr0078693,FBtr0078694 3 2 2 82 3R 1395125 1395144 AATCGTCGCTATGCATACAG 58 1395187 1395310 GATCTTGGTGAAGGTGTTCTC 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 kat-60L1 FBgn0037375 FBtr0300740,FBtr0078628,FBtr0300737,FBtr0300736,FBtr0300739,FBtr0078627,FBtr0300741,FBtr0300738 1 8 8 148 3R 1611781 1611996 ATACTCCAGGAAGCAGTGG 58 1612108 1612126 GTGGTTCCACATTCTGTGG 58 NA Drosophila melanogaster 61 Osi10 FBgn0037417 FBtr0078601 3 1 2 117 3R 2091005 2091025 GCCAAGTAACAAACTATTGGC 58 2091104 2092141 CTCAGAGCCTAGACAGTCC 58 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 2 2 5 99 3R 2584144 2584202 CCAAGCCAGATGTCTTTCC 58 2584063 2584082 TCTGCTATTTGAGAGCTGGT 58 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 3 3 3 159 3R 2667086 2667104 AATGTTCCCATGCACAGTC 58 2651400 2666963 CATTCACAGTACTCGTCCC 57 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081649,FBtr0081650,FBtr0081656,FBtr0081653 1 4 11 85 3R 2735064 2735082 ATCAAATGTCCGGTCACCA 59 2734446 2735015 ATGGTTCTGATGGACCTGC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 3 4 11 97 3R 2724257 2734261 TGCGAAGTCAGTTTGAACG 59 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300494,FBtr0300495,FBtr0113199 2 3 9 112 3R 2922690 2922711 GCAGTAGTAATCCTACAAGCTC 58 2922533 2922617 AGACACGTGTCTCATTCCC 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0081572 2 1 3 91 3R 3017772 3017790 TGTTAGATGCCTTGGAGCA 59 3017845 3018271 AAATGCCGAGCTTGATGAC 58 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113345 1 1 2 80 3R 3613169 3613254 CCGAAATTAGCCCTGAAATGG 59 3613109 3613130 AGGGACAATTGATTGGAATTGG 59 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 3 1 2 105 3R 3826729 3826818 GAACAATTTGGTCCGTGCT 59 3826642 3826660 TTGTACCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0290325,FBtr0081822 1 2 2 83 3R 3833665 3833686 GTCAACACCAAGTTCTTAACGT 59 3833220 3833621 TTCCTCATCAGATGCCTGC 59 NA Drosophila melanogaster 61 Ada2b FBgn0037555 FBtr0081807 3 1 2 136 3R 4064554 4064572 TCAGAGCTGTACCGATACC 58 4063958 4064456 TTTATTATGCAGTGGAGGGTC 57 NA Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0300544 3 1 3 89 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542282 4542633 AGTGATACCTGCTCTTCCAC 59 NA InUTR Drosophila melanogaster 61 hyx FBgn0037657 FBtr0081968,FBtr0300415 1 2 2 80 3R 4865747 4865766 GACAGCCAGATTATCTTCGG 58 4865804 4865902 CTTCTTACCGGATCCATATTTGAG 59 NA Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 2 3 3 96 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064805 5064823 GTTCAGGTTGACGGATCCA 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111031,FBtr0302694,FBtr0111029,FBtr0111030,FBtr0082037,FBtr0111028,FBtr0302691,FBtr0111027,FBtr0302693,FBtr0082039,FBtr0302692,FBtr0302695,FBtr0111032 1 14 14 81 3R 5271546 5271564 TCCATCAATCTGGGCTCAC 59 5271607 5271700 GCATGGCAACCTTAATATGCT 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082118 1 1 3 147 3R 5372637 5372657 GTGCAACGTCAATTTAAACGG 59 5368637 5372529 TTGTACATCGCAATTTGGGT 58 NA Drosophila melanogaster 61 unc-115 FBgn0260463 FBtr0082095,FBtr0082094 3 2 4 97 3R 5515792 5516163 TAGCGAGATGTACATCCGC 59 5515567 5515585 GTATCAGACCCGGACTCAC 59 NA Nonspecific Drosophila melanogaster 61 CG12946 FBgn0037750 FBtr0082159,FBtr0110789 3 2 2 118 3R 5598004 5598022 CCTCCGATGCAGAAATCAC 58 5597846 5597924 TTCTGATCCACTTTCTTCAGC 58 NA Drosophila melanogaster 61 Mical FBgn0053208 FBtr0082209,FBtr0082213,FBtr0082211,FBtr0082212,FBtr0082210 3 5 9 80 3R 5835091 5835469 AACAAAGAGTCGTGCATCG 58 5835029 5835047 CGTAGATCGTACCCAGGTG 59 NA Drosophila melanogaster 61 Fancl FBgn0037781 FBtr0082203 2 1 1 124 3R 5878494 5878512 ATGTAGAGCGCCTTCTGTG 59 5878331 5878350 CAGATAGAGTTTAAGGCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 3 5 5 90 3R 6041343 6042795 TGGATGAGATATCCGAGCT 57 6042847 6042867 GCGCTTATGATATACTCTCGT 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090033 2 1 4 154 3R 6120029 6122462 CCATACAACCAGCTTCACC 58 6122580 6122598 GATTCGCGGCTTAATGTCC 59 NA Drosophila melanogaster 61 CG31406 FBgn0051406 FBtr0082235,FBtr0082236 2 2 2 122 3R 6175448 6175525 CGACAAACGATAATGCAAATCC 59 6175608 6175626 CGGCTTGATGTTCGATGTG 59 NA DesignRelaxed Drosophila melanogaster 61 hth FBgn0001235 FBtr0082255 3 1 8 87 3R 6359719 6374338 ACATATGATGGACGATGGTG 57 6359651 6359669 CTGAGGAATACAATCGCCG 58 NA Drosophila melanogaster 61 CG34114 FBgn0083950 FBtr0110808,FBtr0301070 3 2 2 80 3R 6819256 6819277 TCCTAATATGCCTGATCATGGG 59 6819316 6837744 TTTCACCATCTGGCTTAAAGC 59 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273197,FBtr0273195 1 2 3 100 3R 7202932 7203772 CTCCTACTTCTTCTACATTGACAC 58 7203830 7203849 GAAGTACATCTTGAGCACCG 58 NA Drosophila melanogaster 61 pros FBgn0004595 FBtr0273196 2 1 3 167 3R 7202843 7202861 GGACTACAAGACCTGCCTG 59 7202992 7203740 GATTCGCAATGTTTGGCCA 59 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082459 2 1 2 135 3R 7412203 7412224 CATTTACCATCTAACGTGTCCG 59 7411177 7412107 GAAGCAGTGGTGCTTTGTC 59 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301723,FBtr0301722 3 2 3 80 3R 7866655 7866732 AGGTCGTCTTAGGAAAGGT 57 7866773 7866794 ATATCTACTCTGTGAGTCTCGT 57 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 3 5 5 82 3R 8845522 8845622 GAAATACACGAGAAGGTCCT 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 sim FBgn0004666 FBtr0082711,FBtr0082710 2 2 2 80 3R 8901964 8901987 AAGACCCTGTATCAGTATATCCAC 59 8902025 8902132 TTGTCCTTTGTACAGCAGGA 59 NA Drosophila melanogaster 61 Ace FBgn0000024 FBtr0082780,FBtr0300486 2 2 2 97 3R 9058559 9058695 TTGCTAAGACGGGAAATCC 57 9058480 9058498 GATCTTATCGTCGGTGCTG 58 NA Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 3 3 5 93 3R 9582301 9582319 AATCATCAGCAGTTCCGGA 59 9582374 9582621 CATCCAAGTTCCTGATCTGAC 58 NA Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 2 2 2 80 3R 9600883 9600961 TAAATCACGAGGATGAAGACC 57 9601002 9601021 TTACTTTGCCATCTCCATCC 57 NA Drosophila melanogaster 61 Dip-B FBgn0000454 FBtr0082832,FBtr0082833,FBtr0082831 3 3 3 86 3R 9609973 9610051 CTTTATGTGCCCATTCAATTGC 59 9610097 9610116 CCTTGGATCATCGATCTGGA 59 NA Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 2 2 2 99 3R 10156792 10166952 GAAACGCAGGTAAAGATCTGG 59 10156713 10156732 CATTCGAGGATTTGTGCTCC 59 NA Drosophila melanogaster 61 Mf FBgn0038294 FBtr0302143,FBtr0083030 1 2 10 94 3R 11002129 11004015 CTACAGCCGAACAAAGAAGG 59 11001984 11002004 CCCTCAAGTAGAGACCATAGC 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 1 5 6 85 3R 11024796 11024814 CATTCGGCACAATTTGTGC 59 11024861 11024944 GTCCAAGTTGCTCTGTATTCC 59 NA Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 2 2 2 159 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098565 11098583 GTTGTTGACAGACCTCCAC 58 NA Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 1 2 2 97 3R 12195609 12195627 CCAATCGGCCAATACTGAG 58 12195390 12195549 TACGCACGCCTTTATTAGTG 58 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083287 3 1 2 67 3R 12261243 12261261 TAAGGACGGTGCAAGAGTG 59 12261380 12261398 CTTCACTGCTTTGCTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 2 3 5 134 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391565 12391583 CCTGATCTCCCTTGTGTCC 59 NA Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 1 2 5 140 3R 12920462 12923769 ACACATCAAGCTGAAGTCAG 58 12920341 12920361 TTCTCCGTTGTATTTGACCAC 58 NA Drosophila melanogaster 61 alt FBgn0038535 FBtr0089413,FBtr0089412,FBtr0089415,FBtr0089417,FBtr0089414,FBtr0089416 3 6 6 160 3R 13500929 13500947 CAACCACAATAGCACCCAC 59 13500724 13500806 ATGTGTTTGTCGTCTTGGTG 59 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 1 4 4 80 3R 13519321 13519448 CCACCAGATCAAAGTCCAC 58 13519259 13519277 CCTAGCATTGTAGCCTGGA 58 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 3 4 4 107 3R 13533849 13533868 TCTCAATATTCGCCGTACCC 59 13533697 13533779 ATTCGGTTCGGGATACTGG 59 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0083542 1 1 3 80 3R 13922386 13922504 CTCAATTAGCTCAGGCCGA 59 13922547 13922566 TGCCATACAAGTAGGGACTC 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 3 4 7 115 3R 13997409 14001058 CATTCCGCTAAACGAGAAGAC 59 14001135 14001153 TGAACTTGAGGTCGCTGAG 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083566 2 1 4 84 3R 14073860 14073945 TATGCAGGCAGAAGTAGACC 59 14073992 14074010 TTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 eIF-1A FBgn0026250 FBtr0083572,FBtr0083573 2 2 2 122 3R 14100856 14107428 GCAAGAAGGTGTGGATTAACC 59 14107512 14107530 CGTACGTCTTCAGGTTCCT 59 NA Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 2 2 2 87 3R 14967735 14967823 AATACAAGCACAAGCTGGTC 58 14967667 14967685 AGCTCGTAGGAATCTGTGG 58 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0112787 2 1 2 100 3R 16122130 16122148 CAACTTCAATGTGCCAACG 58 16122207 16122827 CTTCTTCATCTCTAAGATCTGTGG 58 NA Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 1 1 1 64 3R 16407154 16407173 TCTACAGTTCCTACGAGGAG 57 16407052 16407070 TAGATCTCCTAAGGCGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256 1 1 8 104 3R 16582964 16617479 TAAGTTTGAAATGGCGGAAGG 59 16617544 16617563 AGCAGCTTGGGATAATCCTC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510 3 1 9 82 3R 16788008 16789455 CCAGTACAAGTCAAGACGC 58 16789498 16789519 CGATATCCAACTCCTGTTTGAG 59 NA Drosophila melanogaster 61 Calx FBgn0013995 FBtr0083999,FBtr0084000,FBtr0083998 3 3 3 115 3R 16837648 16837666 CTACAGTCGACAAGCTGGT 59 16837744 16837829 AAACTCACTTTCATCGGCTG 58 NA Drosophila melanogaster 61 tin FBgn0004110 FBtr0084086 3 1 1 62 3R 17206623 17206642 CTCCCTAAGGAGCATCTACG 59 17207095 17207113 GTCACCTGGCTGTTATCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34376 FBgn0085405 FBtr0112608,FBtr0112609 2 2 2 80 3R 18274274 18274292 TAGTGCTGGCTATCTGCAG 59 18274332 18282284 CCTTGAGTATTATGATGGGATGC 59 NA Drosophila melanogaster 61 bond FBgn0260942 FBtr0084262,FBtr0084261,FBtr0084263 2 3 3 117 3R 18380470 18380553 AAAGGAGTGGATGAGACGG 59 18380634 18380652 TCTTCATGTACTCGGGTCC 58 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765,FBtr0084360 1 3 3 80 3R 18878659 18878742 GGATTAAACTCCGGGAATCTG 58 18876802 18876820 CTGGATCTGAATGTCCTGC 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 3 1 1 124 3R 19229342 19229360 ACTTCTACGGCACTCAGAC 59 19229183 19229204 CCACCGTAGATAAATTCTACGC 59 NA DesignNoJunction Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 1 3 3 83 3R 19691341 19691359 TCCCATACTGGCTGAAGAC 58 19688928 19691295 CCATTGTAGCCGAGTATCAC 58 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089498 1 2 3 92 3R 19763164 19763182 CTTCAAGTATGAGCGCGAG 58 19762352 19762706 GACTCTTGAACGGATTCGTC 58 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0084507,FBtr0084506 2 3 5 109 3R 19839345 19856230 CAATTGCATCCCAAGACTCTG 59 19839256 19839274 TGGAGCTCTGCATCTTCAC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 1 5 6 80 3R 20045866 20045947 AGAGATTACTGGCTGCGTC 59 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 cav FBgn0026257 FBtr0084556 3 1 4 194 3R 20047467 20048078 GTCAAAGAGGTTAATATGTCGGG 59 20048293 20048311 CTCCTTTACCTCGTCCTCG 59 NA Drosophila melanogaster 61 Bili FBgn0039282 FBtr0302171,FBtr0302169,FBtr0302168,FBtr0302170,FBtr0302172,FBtr0301670 1 6 6 80 3R 20960789 20960881 GTACGAATGTACCCTCTTGC 58 20960923 20960942 GGATCATCACTTGCACTTGG 59 NA Drosophila melanogaster 61 CG5028 FBgn0039358 FBtr0113292,FBtr0084901,FBtr0113289,FBtr0113291,FBtr0113290 1 5 5 102 3R 21507675 21507693 ATGACCAATCTGTACGGCA 59 21507759 21507836 AGATGGCGTAATGGTCACC 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0301470,FBtr0301468 3 2 7 142 3R 21574856 21575000 AATTGTGCATGAACGCCTG 59 21573931 21574750 TGAACAGGTTCGAGCTCTG 59 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 3 3 3 82 3R 21904394 21904538 AGTACTCAACGATCGAGAGG 58 21904331 21904349 ACTGGATCTTCGACTGGAC 58 NA Drosophila melanogaster 61 CG5455 FBgn0039430 FBtr0085016,FBtr0085017,FBtr0085015 1 3 3 82 3R 22293798 22293874 CGATGATAGCGACTATGCT 57 22293920 22293938 AAGTGGGAAAGCTGTACTC 57 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0085144,FBtr0085137,FBtr0085138,FBtr0085145,FBtr0085140,FBtr0085143,FBtr0085139 3 7 12 123 3R 22892191 22892338 CATCGGATACCTTTGTCTTCC 58 22892088 22892106 TGTTGGCTTTCATCCTTGG 58 NA Drosophila melanogaster 61 spz FBgn0003495 FBtr0112834 3 1 12 80 3R 22892913 22893092 TAATCACTTACAGTACGAGGCC 59 22892854 22892873 ACAACTCCCTCATCATTGGT 59 NA Drosophila melanogaster 61 CG12880 FBgn0046258 FBtr0085217 1 1 1 87 3R 23515658 23515676 TCTGACGGCTATCAAGCAG 59 23516275 23516293 CTTCATGAAGCCCATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 3 5 5 149 3R 23529755 23529774 GATCCGATGTACACCAAGAG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0300611 2 1 2 81 3R 23795434 23795452 TCTACGACATCTGCTTCCG 59 23794903 23795389 GACATTGTGACGGAGACGA 59 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085299 1 1 6 87 3R 24425714 24426451 AGCAAGATGACTCCATCACC 59 24426501 24426519 TTTAGGTTCTCGTCGGTGG 59 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085308 3 1 3 191 3R 24501400 24515945 AGTGCCATTATTTCCACAGAC 58 24516098 24516116 GTTCAGGTTGTTCAGCACC 59 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299747 3 1 13 80 3R 24743932 24745223 CTCGACCTTTACAGCAAAGC 59 24745266 24745284 TGATGGAGAATGTCTCCGG 58 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0085359 1 1 2 115 3R 24867892 24867910 AATGGGCACAAGTTCATGG 58 24868574 24870101 ACTAACGTGCAGACTTGAC 57 NA Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 3 1 1 148 3R 24943576 24943595 CTACTAATCGGCATCGAGAC 57 24943768 24943786 ATGGTAGACTGCTGGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14509 FBgn0039647 FBtr0113304 3 1 2 90 3R 25001138 25002275 TAAGACAGGACGTATGATCCG 59 25001068 25001086 CTCCAGGAGTCTCGAACAG 59 NA Drosophila melanogaster 61 CG31427 FBgn0051427 FBtr0113407,FBtr0113406 1 2 2 82 3R 25065061 25065137 GGCAAAGATGATTTCCTTCCC 59 25064999 25065017 GAATAGGCGACCAGGTAGG 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 3 3 4 114 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141981 25142000 CTACAGTAGATGGTGAGGGC 59 NA Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551,FBtr0085550 1 2 2 95 3R 25826680 25826758 TGCATATGGATCACGATAGCT 59 25826815 25826833 ACATGGTCATGGTACCGTC 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 1 5 5 80 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871276 25871294 GGCATCAGATACTGTCCCT 58 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0113483 1 1 12 80 3R 26398784 26399970 CATCGACAGAATCTTCCGC 58 26400014 26400032 CGCTCAATCTCCATGTTGC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 8 13 153 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419563 26420549 GTAGAGTTTCTGGTCGGTG 57 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0302606,FBtr0302607 1 2 13 81 3R 26421340 26421452 CCAAACGCAGATTAGGCAG 59 26421277 26421295 ATGACAATGTCCGAGGTGG 59 NA Drosophila melanogaster 61 CG31004 FBgn0051004 FBtr0085780,FBtr0085779,FBtr0300961 1 3 4 80 3R 27006536 27006773 GATATACCGAATGTCTACGTGAG 58 27006478 27006498 AGATCACCAGGAAGATAATGC 57 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0113314 2 1 4 117 3R 27229895 27230064 TTCAGTTCTGGCAGAATACC 57 27229797 27229815 AATCTTTGTGGAAGAGCGG 58 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 3 3 6 80 3R 27554134 27554155 CTCGAAACGATCAAAGAACTCC 59 27554193 27558654 TTAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 Crk FBgn0024811 FBtr0089114 1 1 3 169 4 231300 232283 GTGATCAAATCGTTTACCGCA 59 232414 232491 ATCATCTTGATCGCTGCCA 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 3 4 4 82 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383624 383643 TTGTAGAACTGTGCAACGAG 58 NA Drosophila melanogaster 61 Asator FBgn0039908 FBtr0300342,FBtr0300343 1 2 3 80 4 502324 502450 TTACTATGCGTTCCAAACGAC 59 502264 502284 ATCTTGTTTGGAAGAAGGCTG 58 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089995,FBtr0089993 1 2 4 109 4 585192 585210 GGCCTAGATCTCAAATCGC 58 585283 586045 TCCTTTAAACCTGCCTCCA 58 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0301285,FBtr0089084 2 3 6 91 4 636725 636744 CATGAGATCGAAGCATCAGG 58 636795 637938 TAGAATTAACTTCGTTGCTGGC 59 NA Drosophila melanogaster 61 mav FBgn0039914 FBtr0290233,FBtr0089103,FBtr0100502 1 3 3 70 4 645271 645399 AGGTCAATATAAGCCAAGCTG 58 645221 645240 CTGGTTACTTCTTAGGCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 gw FBgn0051992 FBtr0089098,FBtr0089100,FBtr0100166,FBtr0089101,FBtr0089096,FBtr0089097,FBtr0089099,FBtr0100165 2 8 8 80 4 671649 672943 TCTAACAGCACAGATTGATGG 58 671589 671608 AAATACGGGTGAAAGCTGAC 58 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0089793 3 1 3 83 4 748858 751407 CCTAAACTTCGACAGTGCG 59 751449 751472 CCTGATTCATTTGGGATGATTCTC 60 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0300379 1 1 9 80 4 1060682 1060703 TATAAGGATACTGTGTCCTGCA 58 1059048 1060641 TCTTGTCGTCTAGCTGCTG 59 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 3 4 4 110 4 1210218 1210237 GAACCGATTTGAGAACGGTG 59 1210307 1210519 GCTTTGCTTATTCCAGATTCGA 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 2 2 8 80 X 165641 167228 GGGCAACAGCAATTACACC 59 165579 165599 TTTGGGTCTACCTGGATTAGC 59 NA Drosophila melanogaster 61 svr FBgn0004648 FBtr0070083,FBtr0070081,FBtr0290016,FBtr0070084,FBtr0070087,FBtr0290017 3 6 8 84 X 398750 398769 CAAGAAGCAGTTCAATGGGT 58 398816 398964 AATCGCCCTCAGATAGCTC 59 NA Drosophila melanogaster 61 RpL36 FBgn0002579 FBtr0070155,FBtr0070158,FBtr0070157,FBtr0070156 2 4 4 81 X 522709 522793 CTTGAAGAACATCCAAACCCG 59 522648 522666 CTTCTCATAGGGAGCGTGG 59 NA Drosophila melanogaster 61 su(w[a]) FBgn0003638 FBtr0070178,FBtr0070177,FBtr0070176 1 3 3 155 X 927433 935032 ATATGAGTATCCTCCGAGCAC 59 935149 935167 GTTTCGCACATTGTAGGGC 59 NA InUTR Drosophila melanogaster 61 Gr2a FBgn0027796 FBtr0114515 2 1 2 98 X 1347843 1347916 CACAATGCTCTGATAACCCA 58 1347977 1347995 ATAGAGAAGGGTGCAGTCC 58 NA Drosophila melanogaster 61 CG14777 FBgn0026872 FBtr0300352,FBtr0070253 1 2 2 120 X 1362209 1362292 CATCGTTAAGGCCATCACG 59 1362376 1362394 CTCCTTCGTCTCTTCCACG 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 2 3 3 194 X 1672702 1672720 AAACGTGGCTATGAGATGC 58 1672991 1673140 GTATTTCTGTCCATCGACCTC 58 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 1 2 2 60 X 2491026 2491044 AGGGCAGTTATGTGGTCAC 59 2491378 2491397 ATTCCGTTGTCAAAGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 1 3 3 87 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678712 2679045 CAGGATTATCTGCAAATAGCGG 59 NA Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570 3 1 3 147 X 3408361 3408432 CCGTCAAATTGCACATCTG 57 3409335 3409353 CTTTAGGCAGAAGTGCCAG 58 NA InUTR Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 6 7 80 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 1 2 2 80 X 3791669 3795149 TGAGTCTCGATGATGACTACG 59 3791609 3791633 GATCAATAATCTCCAAATCCGTCTC 59 NA Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616 1 3 4 80 X 3846007 3846025 GTGCCAATACTAGCTCAGC 58 3846066 3846153 TGGATGGCTTAAACTTATCCTC 58 NA Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 3 2 2 82 X 4551097 4551186 CAAGCTGAATACCGAATTGAG 57 4551229 4551248 AAGAATCATCCTCCGAATCG 57 NA Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 2 2 2 84 X 5549755 5549773 ACTATTGGTCGTCATGGGC 59 5549631 5549712 ATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070850,FBtr0070851 1 2 3 80 X 5559771 5559789 TGGAGGACTTTCTCCTGTC 58 5559649 5559728 TTGGAAGTCAATCCGATTCC 58 NA InUTR Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 1 2 3 124 X 6263370 6263389 TGGAGTTTAAGTTCAGCTGG 57 6263476 6263563 TACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 RpL17 FBgn0029897 FBtr0070982,FBtr0070981,FBtr0070980,FBtr0070983 3 4 4 75 X 6637145 6637163 TTACTCACGCGAGTCAGAC 59 6636287 6637106 GTTCTTGAAGTGCACACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG32736 FBgn0052736 FBtr0071007,FBtr0071008 2 2 2 96 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905917 6905935 TAGTTGGTGTTATTCGCGG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 3 16 21 283 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978578 6978597 CATCGAAATAGGGATGCGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9650 FBgn0029939 FBtr0301241,FBtr0301240 1 2 2 98 X 7126724 7126743 CCAGCGGATCTAGGATACAC 59 7126802 7126953 TGTCGTTCTCGTCTACTAAGC 59 NA Drosophila melanogaster 61 Ubc-E2H FBgn0029996 FBtr0071112 2 1 3 141 X 7987884 7987902 CAATAACACCACCCACGAG 58 7984134 7984153 CATTCGTCAACTCTCACTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089974,FBtr0100376,FBtr0089977,FBtr0089978 1 4 7 149 X 8117891 8117998 AAGATAACGGTCCACACCG 59 8118848 8118866 AAGCTGTGATTGTGGTGGT 59 NA Drosophila melanogaster 61 CG15347 FBgn0030040 FBtr0302500 1 1 2 116 X 8353407 8354808 ATCAGTTGTGGCATGACTC 57 8353309 8353327 CAGGCTCAATGGATCTGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 1 10 10 156 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768135 8768230 GTTTCAGAGCCTTGAGCTG 58 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112753 1 2 3 135 X 9222618 9226495 AGTGCGAAGATCTAACCCG 59 9222501 9222519 TTCGTAATAGGCAGCTGCT 59 NA Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071374,FBtr0071373 1 2 2 98 X 9401287 9404202 TATCCTTCAGTGGCAGTCG 59 9401207 9401225 CATCCATGATGTCCAGCTG 58 NA Nonspecific Drosophila melanogaster 61 ras FBgn0003204 FBtr0071494,FBtr0071495 3 2 3 99 X 10639927 10639945 GACAAAGAGTACCACCGGA 59 10640006 10640118 GAGAAAGTCGTTGTAGGTGAG 58 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 1 4 4 116 X 10676325 10676422 GTACAAGCAGGTCTTCCTG 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 1 2 2 80 X 11126737 11126755 ATCCAACCTTATACGCCCA 58 11120102 11126693 GAACAAAGTCCTCGAAGCT 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 2 1 15 121 X 11290024 11290044 TTCATCCGGACAACAATTGTC 59 11290127 11294829 GCATAAAGGCTGTCGACTG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073489 1 1 15 85 X 11293776 11293794 CAATGGAGTTGTGAGCAGC 59 11293843 11294832 AAAGCATAAAGGGTTGCGG 59 NA Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 3 4 4 164 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444962 11445074 AGCTTCAATCCATCTTCTATGC 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0073525,FBtr0073524 2 2 4 163 X 11567985 11568087 CATACAAATCCCAGCTCGA 57 11568214 11568232 TGCTGTAGCGTATTGTAGC 57 NA Drosophila melanogaster 61 CG42258 FBgn0259143 FBtr0299558,FBtr0299559 3 2 2 148 X 12370017 12370191 CAATATGATCAGAGGTGGCA 57 12370370 12370388 TTGCTAGATTCTGCGAGAG 57 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 3 4 4 82 X 12550118 12550137 CTGAACTATTGTCGTAGCCT 57 12550182 12550381 GTTCTGAACAGTATGCGGA 57 NA Drosophila melanogaster 61 hep FBgn0010303 FBtr0073747 3 1 3 120 X 12976563 12976651 TAGTAGCATCGGTCAATCGA 58 12976462 12976481 ATCCGTGATCAATGTTTGGT 57 NA Drosophila melanogaster 61 CG15745 FBgn0030469 FBtr0073758,FBtr0073759 2 2 2 60 X 13200438 13200458 GTTAGCGACTATTCGGATGAC 58 13200478 13200498 AGTATTCCATTTCCTCCATGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 up FBgn0004169 FBtr0100561,FBtr0301919 3 2 10 91 X 13490773 13494112 AAGAGTACACAGGAGAGGG 57 13490700 13490720 GGTGATGTATTCTTTCAGCTG 57 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 1 4 4 104 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641999 14642017 ATCGTTGGAGGATATGCCG 59 NA InUTR Drosophila melanogaster 61 cngl FBgn0029090 FBtr0089294,FBtr0089293 3 2 2 84 X 15293118 15293253 GCCTAATGGTATACGACGAC 58 15293053 15293073 GGTATCAGCGCTATCATATCG 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 2 6 6 80 X 15646475 15646493 ACTCTATGCTTGCATGGGA 58 15646354 15646432 TGGGAGTAACGAACATTGGT 59 NA Drosophila melanogaster 61 Myb FBgn0002914 FBtr0074171,FBtr0074170,FBtr0074169,FBtr0074173,FBtr0074172 1 5 5 80 X 15749869 15749890 CTATAATCGCGTTGGAATGGAG 59 15749746 15749829 GGTCCAAGTTGACTCTTGTG 58 NA Drosophila melanogaster 61 Stim FBgn0045073 FBtr0074159 2 1 3 135 X 15831778 15832802 GCAATGAATTTAGTTCCATGGG 58 15831664 15831682 TCATCTAGCTGACGATGCA 58 NA Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299535 1 1 3 84 X 15843021 15843565 CAGATAGCGAGAGTGATGAC 57 15842956 15842974 AATACCACGACGGATACCA 58 NA Drosophila melanogaster 61 eIF5 FBgn0030719 FBtr0074149,FBtr0074144,FBtr0074148,FBtr0074147,FBtr0074146,FBtr0074150,FBtr0074145 2 7 7 81 X 15882019 15882115 GTCGATGTTTCGAAGGAGG 58 15881956 15881977 AGTCATCCGAAATAGTCATACC 57 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 2 4 4 80 X 15975870 15975889 CAAATGAACTTTCCGTGTGG 58 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 1 6 9 185 X 16270362 16270692 CAGTGGTATCTGAATGGCG 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 CG4928 FBgn0027556 FBtr0074344,FBtr0074345 3 2 2 153 X 16828468 16828910 CCAGTTTGGTCCTCTCCAG 59 16829027 16829045 AAGATCTCATCCTCTGGCG 59 NA Drosophila melanogaster 61 Arpc3B FBgn0065032 FBtr0113478,FBtr0074410 2 2 2 114 X 16999010 16999524 GAAGTTAAGTCGGAGGTGG 57 16998914 16998932 TATAGAGCTCCTGCTGACC 58 NA Drosophila melanogaster 61 Fim FBgn0024238 FBtr0074443 1 1 3 117 X 17183061 17185292 ATTCCCAACTTGGATGCCA 59 17182962 17182980 ACTCGTCAATCATTTCGCG 59 NA Drosophila melanogaster 61 CG32495 FBgn0052495 FBtr0300976 1 1 6 80 X 17796054 17796073 GCAAGTCGAGATCAATACGA 57 17796113 17796651 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 3 2 2 146 X 17984264 17984361 GTCCGTCAAATGGAGTGAG 58 17984136 17984154 CACTTGATCGACGAGATGC 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 3 6 6 80 X 18286505 18286591 TCATCAAACATCACCAGGTG 58 18286444 18286463 TATTCAGGACATAGACACGC 57 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 3 3 6 117 X 18302640 18302658 TCCTATGCCAGTTTAGGCA 58 18301909 18302559 TCATCTCGCATTGGTAGGG 59 NA Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 3 3 3 90 X 18316518 18317538 GCATTCAAGGTTATCCTCTCC 58 18317590 18317608 CACTAATCGAATAGGCCGC 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074718,FBtr0074719 1 2 8 218 X 19398495 19398513 TGCGATTCGTTGTGTTCTC 58 19400640 19400658 GTCTTGCTCGTCGATTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14235 FBgn0031066 FBtr0074815,FBtr0074816 3 2 3 124 X 19638347 19638366 CTATAGCTATCGCCAGGCTC 59 19635183 19635201 GTCTGACGATTTGTCGCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089397 2 1 13 197 X 20101685 20104511 CTACGGATTATTATGTGCTTGC 57 20101131 20101527 CGTTGACCTCCTTCTTCAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG17065 FBgn0031099 FBtr0301568,FBtr0077340 1 2 2 106 X 20127881 20127899 AGAGCCTGTGTTCTTCGAC 59 20127050 20127812 CATAGCCACCATTGATCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112569 2 1 5 80 X 20663761 20676870 AAGTGAGTAGATCATCGGTGTC 59 20663702 20663723 GTAATATAACCGTTGCGTTGGT 59 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0077241 3 1 2 178 X 20907429 20907447 ACCGACTCATTCATGACCT 58 20907657 20909783 TCGTCATCGCACTGTAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 DIP1 FBgn0024807 FBtr0077372,FBtr0077371,FBtr0301292,FBtr0301957,FBtr0077373,FBtr0300373,FBtr0301293,FBtr0301294,FBtr0300374 3 9 9 97 X 21497271 21497349 TCTTTGCATTATGCGTCCG 59 21497192 21497210 GGTTGTCCACCATGATTCC 58 NA Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 1 1 1 70 X 21847108 21847126 TCTCTATGGAAGGTGCCAG 58 21847626 21847644 AGGACGACGGTGAATAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113683,FBtr0113682 3 2 3 193 XHet 23265 25002 TAAGAAGAATGAACACGCGG 58 25157 25176 ATCTAGCACTGGGAACAGTG 59 NA Drosophila melanogaster 61 CG17168 FBgn0039943 FBtr0113730 1 1 1 151 XHet 62089 62109 GGGACTATAACATGCAATCCA 57 62545 62563 TCGTGGACTTTGACTACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113725 3 1 5 80 XHet 69227 75293 TTGATGTCCTAGCGATCCG 59 69165 69183 CTCGTCGGACAATTTACCG 58 NA InUTR Drosophila melanogaster 61 tRNA:CR32288 FBgn0052288 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32359 FBgn0052359 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:A FBgn0013689 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CR41506 FBgn0085789 FBtr0114242 3 1 1 159 YHet 338144 338235 TTGCTAAACTACAACTCACCC 58 338354 338374 ACCTTTCCTGGTAAATTCCTG 58 NA Drosophila melanogaster 61 CR41509 FBgn0085792 FBtr0114245 2 1 1 129 YHet 328015 328034 GCATGAAGTTGAGGAAGCAC 59 327814 327923 AAATAGTCGCCACGATCGT 59 NA Drosophila melanogaster 61 CR41508 FBgn0085791 FBtr0114244 1 1 1 80 YHet 320321 320341 TACGAAACTGGAACAGAAACC 58 320190 320282 AGCTCTTGATCATCCTTTACTG 58 NA Nonspecific Drosophila melanogaster 61 CR42201 FBgn0085831 FBtr0114289 1 1 1 64 YHet 307219 307237 ACCGTCATCTATGGAAGCC 59 307173 307191 ATTCCTGCACCGAATACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppr-Y FBgn0046697 FBtr0113889 3 1 1 81 YHet 192003 192022 AGAAGACACAATTGCGACTC 58 192063 206138 ATGTCGTTCCACTTCATTACTG 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1135f FBgn0083007 FBtr0113568 1 1 1 76 X 17039511 17039529 GCCATACTGAGCATAACCA 57 17039453 17039474 CTTATATCTTCAGGCACAAGGA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 tilB FBgn0014395 FBtr0077345 1 1 1 80 X 21851783 21851863 GGTGCTTATCACCGAAGAG 58 21851907 21851925 AAGGAGATCTCTTCCAGCG 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077207,FBtr0077204,FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077206,FBtr0077210 1 8 8 80 X 21254403 21254490 GCATTAAGCTGATGAAGGACTG 59 21254531 21254549 GTACGGTGTCTTCGTTGTG 58 NA Drosophila melanogaster 61 CG15323 FBgn0040784 FBtr0301572 2 1 1 60 X 20004298 20004316 TTGCCCTGAATGAGAAGGA 58 20004256 20004274 CTGATTACATCCAGGAGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7889 FBgn0031003 FBtr0074675 2 1 1 61 X 19138669 19138687 CACAAGTTCATGACCCAGC 59 19138773 19138791 GATACGTTCGCACATGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 3 2 2 80 X 18550297 18550368 CGCATGTTCATGATCTTCG 57 18550235 18550253 GGTGAAGATGAAGGTGGAG 57 NA Drosophila melanogaster 61 CG6659 FBgn0030946 FBtr0074613,FBtr0074612 1 2 2 80 X 18548885 18548903 CAACATCTTCTGGTCGGTC 58 18548757 18548842 TACTCTTCGCGAATGTTCAC 58 NA Drosophila melanogaster 61 Taf8 FBgn0022724 FBtr0074514 2 1 1 81 X 17996725 17996801 CATGTTTCCTTTAATTGCCTGC 59 17996840 17996861 GAAGTCAAACACCTGATCTGTG 59 NA Drosophila melanogaster 61 CG4949 FBgn0030813 FBtr0074380,FBtr0074381 3 2 2 66 X 16973288 16973307 GCAGTCCCGATTTGATAGTC 58 16973336 16973354 ATCACAGGACGCAGTAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP15B FBgn0030808 FBtr0290096,FBtr0110990 1 2 2 80 X 16847293 16847376 TACCTTAAGAATTCTATCACCTCGG 60 16847413 16847432 TACGAAGATCAAACGTCGCT 59 NA Drosophila melanogaster 61 ppk28 FBgn0030795 FBtr0100474,FBtr0074335 3 2 2 84 X 16701915 16701935 TTGCACTTCTACTACATGACC 57 16701978 16702062 CCGTATTAGACAAGAATTCGGT 58 NA Drosophila melanogaster 61 CG32572 FBgn0052572 FBtr0074324 2 1 1 134 X 16620481 16620499 AGATCCACTGATCCCTGGA 59 16620596 16620673 CAACTTGCTAGCCACTTTGG 59 NA Drosophila melanogaster 61 CG13014 FBgn0030759 FBtr0074282 1 1 1 60 X 16482695 16482716 TGTTCTGCTGAATCACTTTGTC 59 16482735 16482755 CAATTGGCTGATGTTGTAGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9921 FBgn0030743 FBtr0074235 1 1 1 125 X 16225750 16225851 GTTCCGTTGGGATGTTTGG 59 16225643 16225661 AACGGTAAATCCCTGAGCC 59 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 2 12 12 81 X 15795930 15796015 GGATGCATTACAGATAATAGGTGAC 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG15642 FBgn0030642 FBtr0074076 3 1 1 134 X 15361491 15361509 AATCGAAATGGCGTACTCG 58 15361290 15361394 AAATGATGCAGGCGTATGAG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6294 FBgn0030640 FBtr0074034 2 1 1 171 X 15358297 15358315 CTACGAGGAGTTCGAGGAG 58 15358450 15359773 ATTGGTAAATCTCGCGCTG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG9072 FBgn0030614 FBtr0074029 3 1 1 65 X 14989854 14989873 GCAACTGATTGTCTATCGGG 58 14989808 14989830 TCGTGATCATAGTGATCCTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9065 FBgn0030610 FBtr0073966 3 1 1 230 X 14978545 14978563 GCAACAGTGCATCTCAAGG 59 14978246 14978264 TCTTGTGCGCCTCTATCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32594 FBgn0052594 FBtr0073956,FBtr0073957 3 2 2 94 X 14918909 14918927 GGAGAATAGGGTGGACCTG 58 14918985 14924634 TAAATTCGTTCGGGAGCGT 59 NA Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0073920,FBtr0112982 2 2 2 70 X 14182787 14182810 GAGCTTCATCGATAGATATCATCC 58 14182586 14182607 CCGAAACAAGTAATGTGAAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13404 FBgn0030559 FBtr0299543 3 1 1 120 X 14160057 14160135 CCAGGAGCTCAAGATGGAG 59 14159955 14159973 ACTCAGGTAGAATCCGCTC 58 NA Drosophila melanogaster 61 l(1)G0469 FBgn0040153 FBtr0073927,FBtr0113318 2 2 2 133 X 14100797 14104474 GGCCAAAGACAATAAACCCA 58 14100683 14100701 TATTGATACGCAGCTCCCA 58 NA Drosophila melanogaster 61 CG11095 FBgn0030528 FBtr0073827 2 1 1 185 X 13705907 13705925 ATGTCGACCAGTCGATCAC 59 13706073 13706158 GGGATATTTCATTCGTGCCG 59 NA Drosophila melanogaster 61 CG11151 FBgn0030519 FBtr0073819 1 1 1 106 X 13634135 13634718 CAAGGAGTGGACTCTGGAC 59 13634788 13634806 TGTCAACCATGTCCTCGTC 59 NA Drosophila melanogaster 61 CG15927 FBgn0030389 FBtr0073647 1 1 1 60 X 12349070 12349089 CGATCATCGCGTTACATTGG 59 12349112 12349130 GTTGCTTAACCTTTGGCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0100305,FBtr0073584,FBtr0073587,FBtr0073586,FBtr0100304,FBtr0073588,FBtr0100303,FBtr0073585,FBtr0100302 2 10 10 80 X 11866131 11866150 TCGTCTTTCTGAACACAGTC 57 11865997 11866091 CAGCATAGTACAGAAATTCCGT 58 NA Drosophila melanogaster 61 CG11802 FBgn0030346 FBtr0073600 1 1 1 60 X 11766055 11766078 CATAATATAGTGATTGTGCGTCCC 59 11766018 11766036 AGTCCATGTCCACATCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2025 FBgn0030344 FBtr0073601 2 1 1 80 X 11760459 11760480 CTTTCTGCCTTTGTAAAGAACC 58 11760335 11760420 ACGAATATCTCTGTTGAGTGC 58 NA Drosophila melanogaster 61 CG15220 FBgn0030322 FBtr0073535 2 1 1 132 X 11509654 11509672 CCAGTTCCACAGACAACCA 59 11509469 11509558 AACTCGATGACCTCCTTGG 59 NA Drosophila melanogaster 61 CG15220 FBgn0030322 FBtr0073535 1 1 1 131 X 11509653 11509671 CAGTTCCACAGACAACCAC 58 11509469 11509558 AACTCGATGACCTCCTTGG 59 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073487,FBtr0112813,FBtr0112812,FBtr0073490,FBtr0301289,FBtr0073486,FBtr0301288,FBtr0073489,FBtr0073488,FBtr0073485 3 10 15 90 X 11292684 11292765 CTGGATAAGCAATCGACATTGG 59 11292815 11292834 CATTCTTCTCATCGCGACTC 58 NA Drosophila melanogaster 61 l(1)10Bb FBgn0001491 FBtr0073460 1 1 1 82 X 11219150 11219168 GATCGAACCAACTCTCGAG 57 11219005 11219023 ATTCCGTAATGCGTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15200 FBgn0030278 FBtr0073445 3 1 1 60 X 11077158 11077176 GCCATAAACGTTGGTAGCC 59 11077200 11077218 TTCTTGGTCCACAGGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ran FBgn0020255 FBtr0073471,FBtr0073472 3 2 2 85 X 11040024 11040043 AAGTCGATATCAAGGATCGC 57 11039880 11039979 GGCAGAAATATCGTAATACTGC 57 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073408 3 1 3 80 X 10767734 10771458 GTCCTTTGGAGAAACCGTG 58 10767672 10767692 CCGAACTCACAGATTGATTCG 59 NA Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 2 1 1 61 X 10222046 10222064 CTGCTGGTAGTCTCTTACG 57 10222086 10222446 TTCATCCAGAATTCATTACCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Gr9a FBgn0052693 FBtr0071420 2 1 1 105 X 9956373 9956391 CTTGTTCCTCTTTGGCCAG 58 9956460 9956540 CAGGTGTTTGGACTTGGAC 58 NA Drosophila melanogaster 61 Hex-A FBgn0001186 FBtr0071361,FBtr0071362 3 2 2 60 X 9481077 9481096 GCCATACTCAATGACACCAC 59 9481119 9481137 TGCAGTTGTGATTCTTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16892 FBgn0030122 FBtr0071319 3 1 1 136 X 9168710 9168965 GAGTCTGCTATCCTCTTCGG 59 9169063 9169082 GATAATTGCCATGCGGATCC 59 NA Drosophila melanogaster 61 CG32708 FBgn0052708 FBtr0071286 2 1 1 175 X 8980337 8980433 CAGAGAAGCTGTCAAGTGC 58 8980569 8980590 CCATAGCGAGTCATAGAATTGG 58 NA Drosophila melanogaster 61 CG10962 FBgn0030073 FBtr0071262 1 1 2 100 X 8873858 8942458 GAGAAGGAATGGTGTGCAC 58 8873776 8873794 TTGACGGAATTAGCACTGC 58 NA InUTR Drosophila melanogaster 61 Hexo2 FBgn0041629 FBtr0071249 2 1 1 182 X 8605975 8605993 TTGTGTCCACGAAGAATGC 58 8606138 8606227 AGATTCGGGATTCCAGTGAG 59 NA Drosophila melanogaster 61 CG12659 FBgn0040929 FBtr0071229 1 1 1 106 X 8485666 8485687 CGTTTACCTTTCCAAAGAACTG 58 8485522 8485599 ATTGAGCGTGAAGTAGGTG 57 NA Drosophila melanogaster 61 Cp7Fa FBgn0014464 FBtr0100003 1 1 2 288 X 8365002 8365426 TTCAATTGTTGATGGCGGC 59 8366370 8366388 TTTCCGTACACGGATCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2147 FBgn0030025 FBtr0071166 2 1 1 179 X 8134910 8134983 GTTTCCTGGATCCCTGACTC 59 8135121 8135143 GCTGTAGGTATTGATAGTTGTGG 59 NA Drosophila melanogaster 61 Gbeta5 FBgn0030011 FBtr0071189 1 1 1 60 X 8045459 8045477 GGTCATGTCGTTCAGTCCT 59 8045417 8045438 GATGGAACTTAACGCTATTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300899 3 1 4 159 X 7787442 7787797 CTATCGATGCTATAATCGGATCG 58 7787305 7787323 AGTGCTCGCTTATCCAGTC 59 NA InUTR Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0300899 1 1 4 156 X 7787441 7787794 TCGATGCTATAATCGGATCGA 58 7787305 7787323 AGTGCTCGCTTATCCAGTC 59 NA InUTR Drosophila melanogaster 61 Ir7g FBgn0029968 FBtr0071088 1 1 1 103 X 7779948 7780023 CTACAGAAGCTGGTCCAGG 59 7780090 7780108 GAGTAATGCGGAAACACGG 59 NA Drosophila melanogaster 61 CG2059 FBgn0029942 FBtr0071047 3 1 1 86 X 7181868 7181950 ACCTTACATGAGACGCGAG 59 7182000 7182018 ACTAAATGTCCGGCATCCA 59 NA Drosophila melanogaster 61 CG1677 FBgn0029941 FBtr0089712 3 1 1 151 X 7176178 7176198 TCGCCTTCATATAAGAGACCA 58 7175984 7176065 TCCGATGAGTCTGAGTCTG 58 NA Drosophila melanogaster 61 Top3beta FBgn0026015 FBtr0070930 3 1 1 95 X 6179391 6179474 GTACATACAGACCAAACCGG 58 6179315 6179333 TTGAACTCGCGATACACCT 59 NA Drosophila melanogaster 61 CG32751 FBgn0052751 FBtr0070880 1 1 1 80 X 6091939 6091957 GGAGCAGGGTATTACGGAC 59 6091645 6091897 AGCTGAATTTGAACAGCTGTG 59 NA Drosophila melanogaster 61 dhd FBgn0011761 FBtr0070749 2 1 1 62 X 5206509 5206529 CCATGAACGACTATCACAAGC 59 5206552 5206571 AGAAATCCAGCACGATTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3323 FBgn0029750 FBtr0070758 3 1 1 214 X 5199546 5199565 CGAATCAATCAGATACGCCA 58 5199275 5199369 TTGCTGTTGTTAACGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112949 2 1 5 105 X 4826657 4826677 AGTTGTTCTCCTCAACTAACC 57 4824090 4826592 GCATTTGTGCTCAGATAAACC 58 NA InUTR Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112948 1 1 5 127 X 4824088 4832015 CAACCAAGCACAAATGCAG 58 4823979 4824000 GTTCACTGTTATTGTGCTAGTG 57 NA InUTR Drosophila melanogaster 61 CG32772 FBgn0052772 FBtr0300997 2 1 1 104 X 4805118 4805136 GCATCAGAACTCGCAACAG 59 4805204 4806786 ATCAGATCCACGTCTTCGG 59 NA Drosophila melanogaster 61 CG3546 FBgn0029716 FBtr0070679 3 1 1 60 X 4452880 4452900 CTATGACGAAGAGGACTACGA 58 4452921 4452940 ATCTCTGTAGTAGCCATTGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 1 2 2 84 X 4432734 4432817 AATCATGACGAACACGTGG 58 4432668 4432686 TAATCTCAAAGTGCTCGGC 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0100671,FBtr0100670,FBtr0070651,FBtr0301475,FBtr0070650 2 5 5 80 X 4254298 4254316 CATGAAGGCACTGATGCTC 59 4254360 4254442 AGATCCTTGATGTCCCTGG 58 NA Drosophila melanogaster 61 CG15570 FBgn0029697 FBtr0070645 3 1 1 80 X 4116377 4116466 GAAACTCAGCCAACAAGGG 59 4116509 4116528 ACAGATCAACGTTGATCAGC 58 NA Drosophila melanogaster 61 VhaAC39 FBgn0028665 FBtr0070611 3 1 1 138 X 3775139 3775495 ACCTTGGAGGATCTCAAGC 59 3775597 3775615 TCCTCATGTGCTGGAACTC 59 NA Drosophila melanogaster 61 Crg-1 FBgn0021738 FBtr0070599 1 1 1 60 X 3689253 3690705 ATGGATATCGCATCTACTTCCT 58 3690724 3690744 GAGAACCGTTAACGTAGTCTG 58 NA DesignRelaxed Drosophila melanogaster 61 Csat FBgn0024994 FBtr0070501 3 1 2 162 X 2597432 2597548 TAGCATACACATGAACGCCA 59 2596777 2596796 GATCAGTTTGGCGAACTCTG 59 NA Drosophila melanogaster 61 per FBgn0003068 FBtr0070477 1 1 1 81 X 2585970 2586055 ACAACAAGAAATACACGGACAG 59 2586095 2586115 ATGAAGGACGAGTAGAAGGAG 58 NA Drosophila melanogaster 61 CG3078 FBgn0023524 FBtr0070415 1 1 1 154 X 2152484 2152502 CAGTCTGCCGAATCTTCAC 58 2152287 2152366 TATACGACGATTGCTTGCG 58 NA Drosophila melanogaster 61 CG3857 FBgn0023520 FBtr0070349 3 1 1 60 X 1832963 1832982 TATGTACGGGATCACATGCC 59 1832922 1832940 AGTCTATTCGATGGGCACG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089990,FBtr0089989,FBtr0089991 2 5 5 96 X 1790780 1793024 AGAATCGAACCATGTCGCA 59 1790702 1790721 GAATTCTGCTGCCACATGAG 59 NA Drosophila melanogaster 61 CG3719 FBgn0024986 FBtr0070233 1 1 1 83 X 1274226 1274244 AGAAGTACCTGTCGCAGTC 59 1273396 1274181 TGTTGATCACCTTCTGATCGA 59 NA Drosophila melanogaster 61 Tsp2A FBgn0024361 FBtr0070211 2 1 1 149 X 1240709 1241316 CAAGCTTCCGAAACGATGG 59 1241429 1241447 CCTCAACCAGACGGTTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fs(1)N FBgn0004650 FBtr0070207 2 1 1 80 X 1218828 1218904 TTACATGTAGAGGGACCGG 58 1218945 1218966 ATAGTCTCCTGGAAAGCTTAGG 59 NA Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200,FBtr0112920,FBtr0112919 3 3 3 84 X 30944 31033 TTCCTTCAGCAAGGAATTGAG 58 31078 31097 AAATGGTGCGTAATATGGGC 59 NA Drosophila melanogaster 61 Su(Ste):CR42410 FBgn0259841 FBtr0300140 3 1 1 72 U 6275932 6275954 ACCGAAAGTATATGAGAGGAGAC 59 6275882 6275900 ACTGGCAAAGTGTTCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41518 FBgn0085663 FBtr0302253 1 1 1 60 U 2334238 2334256 TCTGACAGCAATACTGCGA 59 2334196 2334216 ACATATTGTCCAGGTTAACGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1909 FBgn0039911 FBtr0089080,FBtr0089079 2 2 2 80 4 607706 608474 CAATTGGAGCCAAGTTTCTG 57 608515 608535 ATTGATCTTCGTCTCCTAGTG 57 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0113462,FBtr0113463 3 2 3 80 4 270356 270430 TTCACGTATTAACTGGTGAGC 58 270296 270316 TTATCATTGCAGTGAAAGCCC 59 NA Drosophila melanogaster 61 yellow-h FBgn0039896 FBtr0089115 3 1 1 85 4 250188 250548 AAGTTTCAAGGAGTTCATGGTG 59 250592 250612 AGTACTTGGCGTACTCTTGAG 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CG31997 FBgn0051997 FBtr0089154 2 1 1 82 4 175702 175720 AAGTCGTGGGACCTTACTC 58 175577 175657 ACGAGTTCGAATAGCTTTGC 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0100246,FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0089159,FBtr0100245,FBtr0089156 2 9 10 89 4 103293 103311 TTGTCACAATGCTGATCCG 58 103363 106347 CGAGTTAAGCCCATCTTAGG 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-1295 FBgn0083055 FBtr0113584 2 1 1 60 3R 16648391 16648411 TAGATAAAGTGCCAGAATCGG 57 16648432 16648451 GATATTCCAGCTCTGCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:MeU5-C46 FBgn0043853 FBtr0081560 3 1 1 60 3R 3298923 3298943 GCCCATGATGAAATATTCGAC 57 3298883 3298902 TCTGAGCCTTAGGTCTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL6 FBgn0039857 FBtr0085804,FBtr0085805 2 2 2 62 3R 27421798 27421816 TCAACTCCTACCTGAAGGG 58 27421308 27421772 CACGACGCTTGTACATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG1774 FBgn0039856 FBtr0085798 3 1 1 69 3R 27419012 27419030 CTCTGGAACGATGGTGGAG 59 27419120 27419138 CGTATGGTATCCCACGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1638 FBgn0039855 FBtr0113315 3 1 1 110 3R 27416410 27416428 GCTTGTTAAAGGCCAGGAC 59 27416554 27416629 TCTTCTTGATCTCCGTCATAGTG 59 NA Drosophila melanogaster 61 Gprk2 FBgn0004834 FBtr0085788 2 1 1 100 3R 27279223 27279241 ATTGGTCGTGAGCTCTTCC 59 27279302 27279387 TACTCGATCTCGTATTTGACCA 58 NA Drosophila melanogaster 61 Gprk2 FBgn0004834 FBtr0085788 1 1 1 99 3R 27279223 27279241 ATTGGTCGTGAGCTCTTCC 59 27279302 27279386 ACTCGATCTCGTATTTGACCA 59 NA Drosophila melanogaster 61 jdp FBgn0027654 FBtr0085682,FBtr0085681,FBtr0085683 3 3 3 150 3R 26351986 26352004 GGACTTCTACGGTCTGCTC 59 26345477 26348959 CTTGGCCTCCTTTAACTGC 58 NA Drosophila melanogaster 61 Dup99B FBgn0250832 FBtr0089608 1 1 1 94 3R 25541033 25541051 CCTCTTGGTCGTATTGGCT 59 25540904 25540977 ACTTCTCACGATCCTTCTGAC 59 NA Drosophila melanogaster 61 CG33203 FBgn0053203 FBtr0301017,FBtr0114574,FBtr0301016,FBtr0085348 1 4 4 87 3R 24700981 24711987 CTGACACATGCCATACCCA 59 24700912 24700932 AGAAGGACAGGAACTTGTAGC 59 NA Drosophila melanogaster 61 CG1894 FBgn0039585 FBtr0085290 3 1 1 84 3R 24310403 24310423 TTTAAAGTATCAGCCGTTGGG 58 24310468 24310568 GGCATTAGTCAATTGCAGGG 59 NA Drosophila melanogaster 61 CG12426 FBgn0039552 FBtr0300050 3 1 1 88 3R 23697649 23697780 GATCCAATTGCGATGACGT 58 23697579 23697598 CAATGATCGACCATGGACAC 59 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 3 4 4 196 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463958 23463977 CATTTCGAGGTGACGTTCTC 59 NA Drosophila melanogaster 61 Gr98a FBgn0039520 FBtr0085184 1 1 1 78 3R 23314971 23314990 ACCTTCAGTTGAGTCAGGAG 59 23315029 23315105 AACTTTCCCAGCATTTCTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 mrt FBgn0039507 FBtr0085174 3 1 1 82 3R 23104953 23104972 GATATTCTCGGAGTGGAGCA 59 23104816 23104913 GTCTCATAGCCTATATCAATTGGC 59 NA Drosophila melanogaster 61 CG5909 FBgn0039495 FBtr0085114 1 1 1 80 3R 22987266 22987284 GGTCGGAATATACCACGGA 58 22987327 22987470 ATGGAAGTCCCTCGTATTCG 59 NA Drosophila melanogaster 61 grass FBgn0039494 FBtr0085111,FBtr0085112 1 2 2 80 3R 22984548 22984566 GGAGCTATGATATCCGAGC 57 22984667 22984742 CCGGATCTCATAAAGATCGT 57 NA Drosophila melanogaster 61 CG14257 FBgn0039479 FBtr0299564 1 1 1 102 3R 22905115 22905610 ATCACGAGACGATCACCAC 59 22905676 22905694 GGAAGGTACTGATGGGTGG 59 NA Drosophila melanogaster 61 CG31082 FBgn0051082 FBtr0085022 2 1 1 60 3R 22410290 22410308 CACCTTCCTATGCAGACAC 57 22410332 22410350 CTTGTATATCGACCACGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 2 3 3 85 3R 21511213 21511297 ACTATTTGGATCACCCAGC 57 21511146 21511164 ATTCATGACGTAGCTGAGG 57 NA Drosophila melanogaster 61 to FBgn0039298 FBtr0084810 2 1 1 80 3R 21066527 21066600 TGACAATGGTTAACGTCAGG 58 21066643 21066661 TAACGTCCAGGTAGGTCTC 57 NA Drosophila melanogaster 61 Mocs2 FBgn0039280 FBtr0084782 1 1 1 80 3R 20951605 20951626 TCAGTAGAATCAAACGAGTGGA 59 20951487 20951565 CACGTTTGGTGAAGTGTCTG 59 NA Nonspecific Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662,FBtr0299660 3 3 3 80 3R 20869766 20869841 CTTTCCGGAGTGTAAATGGT 57 20869705 20869724 TTGACTAGATCGATGACGGT 58 NA Drosophila melanogaster 61 tld FBgn0003719 FBtr0084691 3 1 1 80 3R 20577196 20577265 GATTCGAGGTGGTATGTGG 57 20577306 20577327 TGTAGTCCATAGGATAGTTGGG 58 NA Drosophila melanogaster 61 Orct FBgn0019952 FBtr0084599 3 1 1 60 3R 20103776 20103794 TATGATCTCTGGTGCCGTG 59 20103818 20103836 ACGGTTCAAAGTGAAGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 1 5 5 100 3R 19824625 19824643 TAAGGAGCGTGATCTCGAG 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 LSm3 FBgn0051184 FBtr0084505,FBtr0300648 3 2 2 81 3R 19822358 19822380 CCGATTGAGTTTAGATGAGAAGG 59 19822420 19822499 CTGATCAAAGGCGTGAAGAC 59 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089497,FBtr0089498 1 3 3 80 3R 19763340 19763465 ATTCAAGCTAAGATCATTGCCG 59 19763281 19763299 GATGTTGCGATCGATGAGG 58 NA Drosophila melanogaster 61 Pros26.4 FBgn0015282 FBtr0084520 1 1 1 263 3R 19757071 19757089 GTTCATCAAACGTTCGGCA 59 19756765 19756785 CCTCCATCATCAGGTAATCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13602 FBgn0039127 FBtr0110793 2 1 2 109 3R 19754492 19754567 CGGCGAGATTATACCACGT 59 19754401 19754420 GCCCATTTGGATAGTCATCG 58 NA Drosophila melanogaster 61 CG5857 FBgn0039125 FBtr0084491 2 1 1 143 3R 19750651 19750730 ACACAGACTATCAACACCTG 57 19750834 19750854 ATTCAATGGAGATCTCCTTGC 58 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469 3 1 2 63 3R 19559004 19559022 CGTACACAACTTCACGCAG 59 19558618 19558977 GATTGGACATCGCAACGTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469 2 1 2 114 3R 19559055 19559073 TAAACTGTTTCGCTGCGAG 58 19558618 19558977 GATTGGACATCGCAACGTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10168 FBgn0039087 FBtr0084418 2 1 1 91 3R 19364259 19364277 AGGTAACGATGGTCACACC 59 19364126 19364207 ATTCTGCATAAGCTGGTTTAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG16732 FBgn0039086 FBtr0084419 2 1 1 84 3R 19362087 19362159 AGAAATGCTTGAGTCTGACC 57 19362022 19362040 ATTAAAGAGCGCCTTTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6697 FBgn0027526 FBtr0084347 2 1 1 82 3R 18887527 18887605 ACCTGAAGTACAAAGGAAAGAC 58 18887645 18887666 CATCATAAGCTTAAAGTTGGGC 58 NA Drosophila melanogaster 61 CG13833 FBgn0039040 FBtr0084362 2 1 1 90 3R 18859821 18859957 CATACAAGGCCAATGTAACCA 58 18859751 18859770 TTAACCAGGACGGTAACTGG 59 NA Drosophila melanogaster 61 mRpL45 FBgn0038996 FBtr0084272 2 1 1 167 3R 18444325 18444410 AAACTGCTGCAGGTTATGC 59 18444540 18444559 GAACTTGAGCTTACGAAGGC 59 NA Drosophila melanogaster 61 CG5379 FBgn0038956 FBtr0084235 3 1 1 149 3R 18212709 18212797 TCTTTAAGGTTGTTCGATCGG 58 18212580 18212598 CCCTGTCAAGAGATCCCAG 59 NA Drosophila melanogaster 61 CG34131 FBgn0083967 FBtr0110878 1 1 1 113 3R 18189835 18189928 CTATCAGCTATCAGATTAAGAGCCT 59 18189999 18190017 CCACCATCAAATTGACGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 2 2 2 60 3R 18189837 18189927 ATCAGCTATCAGATTAAGAGCC 57 18189948 18189966 AGAAGATGAACTGCACCAC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Cby FBgn0067317 FBtr0290217 2 1 1 84 3R 17693874 17694045 CTTCAAGCAGTTGTTTGCA 57 17694092 17694111 TATATTGCAACGTCCCTGAC 57 NA InUTR Drosophila melanogaster 61 glec FBgn0015229 FBtr0084157 2 1 1 135 3R 17681228 17681246 CGCAAAGCTGATCCTTCAG 59 17677588 17681130 ATTGTACATGCCTTTGAGGC 59 NA Drosophila melanogaster 61 Gr93c FBgn0045469 FBtr0084159 2 1 1 81 3R 17669890 17669966 CGTGGCATATGAAGTGGGA 59 17669827 17669846 ACTTCGAATAGTCCCAAGGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 2 22 22 81 3R 17202595 17202613 TTGGTGTTATCCGTCTGCT 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 1 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 Pros28.1A FBgn0017557 FBtr0083928 1 1 1 60 3R 16574332 16574355 TCGGTATATCGTGTCTAATAGGAG 59 16574295 16574315 GTATGAAAGAGACGTGCAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42322 FBgn0259222 FBtr0299769,FBtr0299772,FBtr0299770,FBtr0299768,FBtr0299773,FBtr0299766,FBtr0299771,FBtr0299767 1 8 8 104 3R 16575003 16575022 GCGTTGCTAGCCTATATGGA 59 16575087 16575199 GAACATAACCCTAAACACGGC 59 NA Drosophila melanogaster 61 CG15923 FBgn0038814 FBtr0113254 2 1 1 80 3R 16438765 16439050 ATCGACCATGCTATCAAGGA 58 16438704 16438723 GTCTATTTCGCAGTTCAGCA 58 NA Drosophila melanogaster 61 Elongin-B FBgn0023212 FBtr0083947 3 1 1 80 3R 16404506 16404645 TGACATTCAGGAACGAGGT 58 16404444 16404462 TGACTTCGGGTAAGTCTGG 58 NA Drosophila melanogaster 61 CG34118 FBgn0083954 FBtr0110821 3 1 1 84 3R 16309755 16309773 GCCAACATAGCAGAACTCG 59 16307343 16309707 CACAGTTCACATGGCTAGC 58 NA InUTR Drosophila melanogaster 61 CG4783 FBgn0038756 FBtr0083823 1 1 1 111 3R 15774258 15774334 CAGCAAAGCTTTATTAGATCCG 58 15774406 15774424 TCTGAGTAACCACCTTGGG 58 NA Drosophila melanogaster 61 CG4468 FBgn0038749 FBtr0083852 3 1 1 80 3R 15740854 15740872 CAGAAGGTGGACGAGAAGG 59 15740724 15740811 CATTTCAAATGCCTCCGGAG 59 NA Nonspecific Drosophila melanogaster 61 CG3517 FBgn0038706 FBtr0083770 2 1 1 60 3R 15250354 15250372 CTACTACGAGCCGAAAGTG 57 15250312 15250330 ATCGTTGTACGAGGGTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NP15.6 FBgn0027785 FBtr0083712 1 1 1 60 3R 14853272 14853290 AAGGATGAGACCATCACGG 59 14853314 14853332 GACTCGGATTGGCAAAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 3 2 2 80 3R 14419606 14419627 TTACTGTGATCTCAATGGAGGA 58 14419480 14419566 TCGCAAGTTAAGGCAATCTG 59 NA Drosophila melanogaster 61 CG14304 FBgn0038629 FBtr0083639,FBtr0114497 1 2 2 80 3R 14419607 14419628 ATTACTGTGATCTCAATGGAGG 57 14419481 14419566 CGCAAGTTAAGGCAATCTG 57 NA Drosophila melanogaster 61 CG12333 FBgn0038617 FBtr0083655 1 1 1 119 3R 14227438 14227458 CGTAAACTCCATCAAGTTCCA 58 14227282 14227357 GAAGAATGGCCCTTCTTGG 58 NA Drosophila melanogaster 61 CG7669 FBgn0038607 FBtr0083576 2 1 1 166 3R 14188582 14188600 AAAGACGGTCCAGAAGGAG 59 14188730 14188803 TAAGTGGTTGCTGCTTTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12321 FBgn0038577 FBtr0083616 3 1 1 60 3R 14013788 14013809 GTTGTTTAAAGCCTTCGATGAG 58 14013749 14013769 GAGGAGATAGCGGAATAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14316 FBgn0038567 FBtr0083546 3 1 1 131 3R 13979073 13979091 CTTGTTGCTCAGAATTGCG 58 13979239 13979257 ATCACAATGTCCTCCGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17801 FBgn0038550 FBtr0083525 1 1 1 82 3R 13632724 13632742 TCTGTCACCTGAATCCCAC 59 13632603 13632683 CTGTTCTAACCATATTCCAGTGAG 59 NA Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 1 2 2 82 3R 13361550 13361568 TGGCTAAGGGTTTCCTAGC 59 13361795 13361813 CAGGGAGAGCTTATCTGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14331 FBgn0038510 FBtr0113243,FBtr0113244 2 2 2 140 3R 13265129 13265147 ATTGACAACGTGAGACTGC 58 13264945 13265026 GTCCAACACAATTATGTCGC 57 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089895 3 1 3 89 3R 13219599 13219617 CCCTAAGATGCAAGGAGGG 59 13219313 13219549 AAATTGTGAGCTTCTTCACCTG 59 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853,FBtr0302852,FBtr0300053,FBtr0300361 3 4 4 80 3R 13043130 13043150 TCCTTGATAACTAAGCCTGCA 59 13043017 13043093 CCTTGGAAGAAATCTATGGATCAC 59 NA Drosophila melanogaster 61 CG31274 FBgn0051274 FBtr0083369,FBtr0083368 2 2 2 65 3R 12819335 12819355 CGTAAACCTGGACATAAACAC 57 12819379 12819464 CAATTGTTGATCCACAAGATCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 3 2 2 99 3R 12195611 12195629 TTCCAATCGGCCAATACTG 57 12195390 12195549 TACGCACGCCTTTATTAGTG 58 NA Drosophila melanogaster 61 CG14879 FBgn0038419 FBtr0083325,FBtr0083326 3 2 2 73 3R 12174544 12174563 GTACCTCGGATCGAGTAACC 59 12173238 12174508 GTTCACCGAGAATTGCTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG5916 FBgn0038401 FBtr0083251 3 1 1 88 3R 11973380 11973471 GTTCAAAGTTCAGCGATGTG 58 11973519 11973540 GTAACCATCCATGAACTTTGAG 57 NA Drosophila melanogaster 61 CG5478 FBgn0038386 FBtr0083242 3 1 1 60 3R 11758811 11758833 CACCAAGATAAAGATCACTCCAG 59 11758773 11758794 TTCGATGGTAGCCTTTATTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31291 FBgn0051291 FBtr0083243,FBtr0083244,FBtr0113402 3 3 3 81 3R 11740155 11740174 TGGATAAACTGACCAACGAG 57 11737878 11740113 GCAGATATTTCCTCTTTGTGC 57 NA Drosophila melanogaster 61 CG31446 FBgn0051446 FBtr0083163 2 1 1 81 3R 11518929 11518950 CCAGAGTAATGATTATGTGGCC 59 11518990 11519068 CCACCAAATTCCAGAGAACAG 59 NA Drosophila melanogaster 61 CG31296 FBgn0051296 FBtr0083155 1 1 1 98 3R 11357005 11357078 AACCCATCGAAATTCAGCG 58 11356925 11356943 GCGAAACTCATTGAAGGCA 59 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083078,FBtr0083080 2 2 3 88 3R 11136006 11138125 TGTTTGAAACGCTAAGTGCT 58 11138176 11138194 TTCTTCTTGATGGCGTCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 l(3)neo43 FBgn0011476 FBtr0301089 2 1 1 106 3R 11104157 11104238 TTCTCCAACCTCAGGTATCAG 59 11104071 11104089 GACTCCAACGTCACATCCT 59 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0302325,FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 1 6 6 80 3R 11027854 11027872 TTCACAATGACGTTCCTGG 58 11027916 11027996 GTAAACGTCCTTGCTAGCG 59 NA Drosophila melanogaster 61 Pde6 FBgn0038237 FBtr0300330 2 1 1 92 3R 10343880 10343898 CTAGTCAGGATCAGACGGA 57 10343750 10343824 GCTCAAAGTCCGTAAAGGT 57 NA Drosophila melanogaster 61 CG12402 FBgn0038202 FBtr0082914 2 1 1 83 3R 9931787 9931871 ATTTGCCAATACCAGACAAGAC 59 9931725 9931743 TCCATATCCCATCAGGCCT 59 NA Drosophila melanogaster 61 CG8870 FBgn0038144 FBtr0082750 2 1 1 114 3R 9206531 9206626 TTCCTGTGCGCTATACGAG 59 9206703 9206722 ATTCCTTGTCCCATGTCTGG 59 NA Drosophila melanogaster 61 CheA87a FBgn0038142 FBtr0082749 1 1 1 97 3R 9195610 9195684 AATGATTGGACGGTTGTGC 59 9195745 9195763 ATAAAGTCGCAAAGCTGCA 58 NA Drosophila melanogaster 61 poly FBgn0086371 FBtr0082772 3 1 1 145 3R 9192597 9192615 TACGGTCATACTAGCACCT 57 9188568 9192488 CATTGTTTCGATCCGTTGG 57 NA InUTR Drosophila melanogaster 61 snk FBgn0003450 FBtr0112833,FBtr0082716 2 2 2 80 3R 8866925 8866943 GTCCCTGTCATCTGTTGTC 57 8866807 8866884 ATTGTACTCCTGACATTTGGTG 58 NA Drosophila melanogaster 61 CG17327 FBgn0038107 FBtr0082720 1 1 2 96 3R 8823042 8823175 TACAAGGTGCAGGACATCC 59 8822964 8822982 TCTTTAGGTCGGTTCGGAC 59 NA Drosophila melanogaster 61 mbo FBgn0026207 FBtr0082668 3 1 1 60 3R 8503145 8503164 GAGCTTCGAACTGCTTAACC 59 8503104 8503124 ATGTCGTTTAAGGTACTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpn FBgn0010218 FBtr0082548,FBtr0082547 2 2 2 60 3R 7989123 7989141 TCGCAGTAGCTGAAATTCC 58 7989081 7989102 CTCTGTTCAACAATGACCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42504 FBgn0260230 FBtr0300639 2 1 1 60 3R 7857175 7857195 TAGCCTACGAATTCCATCGAC 59 7857079 7857156 CCTAAGCAACTCCTAATACGAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3281 FBgn0260741 FBtr0082511 1 1 1 95 3R 7788347 7788365 ACCAATCTGTATGTCCACG 57 7788217 7788289 CCATGTCCACTTCAATTTGG 57 NA Drosophila melanogaster 61 I-t FBgn0025821 FBtr0082427 2 1 1 60 3R 7530026 7530044 GAGACGGATAGTCTGCTCC 59 7530066 7530086 TTCTTTCGGAGATGACAATCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6834 FBgn0037935 FBtr0082438 3 1 1 85 3R 7511672 7511744 CAACTGAAAGATCACACTTCCA 59 7511608 7511628 TTAACGTCCGTAAAGTTGTCG 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082453,FBtr0082454,FBtr0082452 1 4 6 66 3R 7417028 7418105 CAGTGGCTCGAGATCAGAG 59 7416980 7416998 ATACTCGTTGGCTACGACC 59 NA DesignNoJunction Drosophila melanogaster 61 wkd FBgn0037917 FBtr0082414,FBtr0082413 2 2 2 131 3R 7409666 7409687 GCCTACTCGATATACAATCCCA 59 7409779 7409855 CTGCAGGTATACATCGCAC 58 NA Drosophila melanogaster 61 PGRP-LB FBgn0037906 FBtr0082398,FBtr0082396,FBtr0082397 1 3 3 94 3R 7279013 7279183 GATTGGAGAACCGAACTGC 58 7278937 7278955 TAGGCAGGGTCAATGTAGC 59 NA Drosophila melanogaster 61 CG5276 FBgn0037900 FBtr0082390 1 1 1 94 3R 7258585 7258603 CATGATCCACGAGAGTGGA 58 7258658 7258733 CCTTGGTTTCGTTGTATTTCTC 58 NA Drosophila melanogaster 61 CG18643 FBgn0037898 FBtr0300901 3 1 1 98 3R 7255980 7256067 ATGTTGAGTATCTTGTCCGG 57 7256127 7256146 GCAGTTCTAGGTTCAGATCC 57 NA Drosophila melanogaster 61 ninaG FBgn0037896 FBtr0082404 2 1 1 93 3R 7245310 7245474 GGTAGATGCTAGTGTACTACCC 59 7245238 7245256 CTTCAGAATCCAAGAGGCG 58 NA Drosophila melanogaster 61 scpr-B FBgn0037888 FBtr0082362 1 1 1 99 3R 7066602 7066620 CTGGACAAGCACATAGCCT 59 7066468 7066486 GGATGAGTTTGTGATGCGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG4683 FBgn0037857 FBtr0082326 1 1 1 80 3R 6776473 6776494 CAAGATCCTGGTAGTGTATCCA 59 6776532 6776607 CATCTTCGATATTGCGTTATGC 58 NA Drosophila melanogaster 61 Tsp86D FBgn0037848 FBtr0082288 1 1 1 114 3R 6695202 6695220 ATCATCCACTCGTACCGTG 59 6695298 6695373 CGTTCTTGCTCCAATCCTG 58 NA Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 3 4 4 87 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525811 6525958 CTCGTTCAGATCGTTTATCTTATCG 59 NA Drosophila melanogaster 61 CG6325 FBgn0037814 FBtr0082260 2 1 1 80 3R 6230154 6230173 CAAAGAAGCTAAGAAGACGC 57 6230029 6230111 GTGATATGCAGTCGTCCTC 57 NA Drosophila melanogaster 61 CG12818 FBgn0037809 FBtr0082230 2 1 1 159 3R 6157512 6157588 AATTTGCTGAAAGCGAGGC 59 6157710 6157729 TTAGTGGTCTTCACTCTCGC 59 NA Drosophila melanogaster 61 CG8417 FBgn0037744 FBtr0082131 3 1 1 111 3R 5586106 5586124 GGAAAGCGTTAAGTTGTGC 57 5586198 5586270 ATCGTTGGATTTCAGTTCGT 58 NA Drosophila melanogaster 61 CG34409 FBgn0085438 FBtr0112676 3 1 1 80 3R 5569505 5569525 TAGTTCATCCGAACTACGACC 59 5569381 5569464 TGAAAGTGCCATTAGTGCTG 58 NA Drosophila melanogaster 61 dmt FBgn0016792 FBtr0082086 3 1 1 196 3R 5539290 5539593 CATTTGCCGATAAGCAACC 57 5539753 5539771 CTCATGCTCGATGTCTCTG 57 NA Drosophila melanogaster 61 CG34117 FBgn0083953 FBtr0110817 3 1 1 227 3R 5225751 5225769 TGTTGAGAACAGCTGTTCG 58 5225486 5225504 GTTTGACCCAGGAAAGTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16734 FBgn0037667 FBtr0302133,FBtr0300794 3 2 2 80 3R 5081667 5081686 AAGCCATCGAATCTGTTTGG 59 5081729 5081803 ATTGGTTCCACGTGAAAGC 59 NA Drosophila melanogaster 61 Mst85C FBgn0028708 FBtr0081969 1 1 1 164 3R 4876741 4876759 TCATGGACTTCGGATTCGG 59 4876946 4876964 ATAGACCGCTGAAATGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 pch2 FBgn0051453 FBtr0081898 3 1 1 60 3R 4387359 4387377 CAGCGACACAGTTCATGTG 59 4387263 4387338 AATTGCATTAGAGCGAAGATCG 59 NA DesignRelaxed Drosophila melanogaster 61 ato FBgn0010433 FBtr0081828 1 1 1 60 3R 4104115 4104137 CTCAATACCATGTACAATGGAGG 59 4104154 4104175 TCATTCCGTATTGTTGGTTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10029 FBgn0037498 FBtr0081591 2 1 1 81 3R 3142378 3142399 TTCATTTCCAAGGATCATGCTG 59 3142214 3142337 CCACAAGGAACCTACAATCG 58 NA Drosophila melanogaster 61 Pbprp4 FBgn0011282 FBtr0081597,FBtr0300016 3 2 2 95 3R 3077084 3077103 CACCACTTCAGCTCCTAGAG 59 3076953 3077027 AAGACATTGGTCATCGACGT 59 NA Drosophila melanogaster 61 CG31493 FBgn0051493 FBtr0081566 2 1 1 124 3R 2957468 2957556 AGTTGAAGAGCTGCTTGTG 58 2957644 2957662 CTCGGGATATGATGTGCCT 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 3 6 11 80 3R 2724255 2734247 GGTAAGTGTCAAGAACGCA 58 2724193 2724214 GAAGTGAAACTCCTTCTCTAGC 58 NA Drosophila melanogaster 61 Ama FBgn0000071 FBtr0081618 3 1 3 105 3R 2588653 2588672 CTTCATCGGCAAATACACTG 57 2589574 2589594 TATAAGACCGATTAGAAGCCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 gpp FBgn0014963 FBtr0081723,FBtr0081724 2 2 2 114 3R 2264478 2264564 ACAGACAGAAACCTCAGTG 57 2264640 2264660 CGATCACATGCAGATAATACG 57 NA Drosophila melanogaster 61 CG18048 FBgn0037435 FBtr0081712 1 1 1 60 3R 2172571 2172589 CACCGTATTGCAGGAACAG 58 2172613 2172631 GGACATTCGATCGATGAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10298 FBgn0037432 FBtr0081710 3 1 1 92 3R 2168865 2168937 TGCTTACGGTGACTTATGGT 59 2168992 2169010 CCCATTTCACCTTTGGCTG 59 NA Drosophila melanogaster 61 Osi18 FBgn0037428 FBtr0078611 2 1 1 78 3R 2156476 2156495 CTCAGGGAGGATTAGTTCCC 59 2156828 2156846 AGAAGGAAGGGCAGAACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11373 FBgn0040679 FBtr0078657 3 1 1 155 3R 1786640 1786658 AAACCATCAGCAAAGTCGG 58 1786219 1786523 CTTCCAAATCCTATCGTGTGC 59 NA Drosophila melanogaster 61 CG31551 FBgn0051551 FBtr0078706 1 1 1 60 3R 1456844 1456862 GAAGAATCAGAGCAGGGAG 57 1456884 1456904 CAGTAGAGTGTGAACTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or83a FBgn0037322 FBtr0078797 2 1 1 97 3R 1223554 1223573 TTTATGCTGAATTCCCGCAG 59 1223405 1223498 GAGAAGGCAGTAGTAATAGTCCC 59 NA Drosophila melanogaster 61 Or83a FBgn0037322 FBtr0078797 1 1 1 85 3R 1223554 1223572 TTATGCTGAATTCCCGCAG 58 1223416 1223508 AGTAATAGTCCCTCTGAAACGA 58 NA Drosophila melanogaster 61 CG34112 FBgn0086608 FBtr0110805 3 1 1 128 3R 219646 219664 CTTCTCCATCTCCCGATCC 59 219477 219557 GTTAGATATGGGCTCTTCTCGA 59 NA Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0111206 1 1 2 76 3R 40846 40864 AGTGTCTCTGGCGTAACAC 59 31451 31469 TAAAGGATTGCCATCCCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CR18217 FBgn0036646 FBtr0301925 3 1 1 94 3L 16595716 16595734 GAATGGACAGAAGCAGTGG 58 16595581 16595661 CCGAAGACTCTTTAGATTGTCC 58 NA Drosophila melanogaster 61 CR32477 FBgn0052477 FBtr0072500 2 1 1 86 3L 227446 227522 GCGTTTGAGAAATGACGCT 59 227569 227590 TGTGATTGATAAGACTGGTTGC 59 NA Drosophila melanogaster 61 nAcRalpha-80B FBgn0037212 FBtr0300118 2 1 1 80 3L 23232107 23255818 ATGGGTTTAAGGTTGATCTGAG 58 23255858 23255877 ATTCAGATAGGTCCACACCC 58 NA Drosophila melanogaster 61 Mes2 FBgn0037207 FBtr0078563,FBtr0078561 1 2 2 152 3L 22939656 22943635 CATCAGAGAACGAAAGGGC 58 22943749 22943769 TCGTTAAAGGAATTGGACAGC 59 NA Drosophila melanogaster 61 mael FBgn0016034 FBtr0089631,FBtr0089633,FBtr0089632 2 3 3 83 3L 22718571 22718589 ATCAACAAATTCGCGACGG 59 22718636 22718716 ATCCTCGTGGTACTGACAC 58 NA Drosophila melanogaster 61 CG32452 FBgn0052452 FBtr0078524 3 1 2 102 3L 22710938 22710957 GGTATCAACTCTGACTCCGG 59 22711108 22711126 CTCCGATATCCCGTCTGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11437 FBgn0037165 FBtr0078505 1 1 1 60 3L 22462654 22462672 CAACTGGCTTGTTGCTCTC 59 22462696 22462714 TCTGGTAGGTAGAGATGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ddx1 FBgn0015075 FBtr0078492 1 1 1 98 3L 22256591 22256663 ATTCGAAGAGTTTGGCGTG 58 22256778 22256796 ATCAGAGGAATGGCCTCAG 58 NA Drosophila melanogaster 61 CG14573 FBgn0037125 FBtr0078433 2 1 1 73 3L 21727736 21727754 TTTACTATGTGGGTGCCCA 58 21727791 21727809 CTACCAGCCTAGTTGCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14569 FBgn0037123 FBtr0078456 3 1 1 66 3L 21724497 21724515 CTATACCCAGTCCTTCGCC 59 21724449 21724467 AAATCGAAGGGAACACTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33289 FBgn0053289 FBtr0078367 3 1 1 80 3L 21528187 21528207 GCAATACATGGATACTCAGCA 58 21528248 21528457 CGAATGTAGGGCGATTTCTC 58 NA Drosophila melanogaster 61 CG7632 FBgn0037071 FBtr0078339 1 1 1 93 3L 21298056 21298077 GTTGCCAAATGTAAGAAACTCC 58 21298190 21298208 CCATGGAACTGGTATGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5078 FBgn0037005 FBtr0078208 2 1 1 60 3L 20500161 20500180 ACGGATGTTGAAACTCAAGG 58 20500203 20500221 TACACAATCCCGACATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078200 3 1 2 80 3L 20468527 20468545 AGACAGCTTTGATAGCCAC 57 20468586 20468674 TGTAGGATATCTGTGTTCTTCC 57 NA Drosophila melanogaster 61 rdgC FBgn0004366 FBtr0074834,FBtr0074832,FBtr0074833,FBtr0074835 1 4 4 80 3L 20254920 20254939 GTTTCCCAACAAGTTACGGT 58 20254982 20255057 AAGACCGTTCTTATGCAGC 58 NA Drosophila melanogaster 61 CG14186 FBgn0036935 FBtr0074870 1 1 1 81 3L 20094083 20094332 CTTTAATCGCAATGGTATCACC 58 20094023 20094042 GCATATGTTCGAGATGAGCA 58 NA Drosophila melanogaster 61 Cpr76Bb FBgn0036879 FBtr0074933 3 1 1 66 3L 19513039 19513060 ACTATCCCAAGTACCAATTCGA 59 19513087 19513105 CACTGGCTCTTCTGGTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14087 FBgn0036868 FBtr0074996 1 1 1 80 3L 19380801 19380820 AAGAGGAAGAGCACAGACAC 59 19380863 19381033 GTCACGTCTACTGGAGGAG 58 NA Drosophila melanogaster 61 Bet1 FBgn0260857 FBtr0074990,FBtr0074989 3 2 2 125 3L 19254667 19254686 GAGCCAAGAAGCGTATATCC 58 19254879 19254897 TGAAGGGTGCTGGTTTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34255 FBgn0085284 FBtr0112449 1 1 1 105 3L 18863645 18863717 CTTCAGCGGAAACTAATCGA 58 18863785 18863803 GATCAGTGGTTACGAGCTG 58 NA Drosophila melanogaster 61 CG6885 FBgn0036810 FBtr0075053 2 1 1 60 3L 18738243 18738261 ACGCAACAGAAGTCATTGG 58 18738283 18738303 GAAAGTTGTGCTAAATCGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32199 FBgn0052199 FBtr0075106 2 1 1 93 3L 18606533 18606551 GTTGACTACGTGGAGTTGG 58 18606665 18606745 TGTCAGATGCGTAGATTAACG 58 NA Drosophila melanogaster 61 Ir75a FBgn0036757 FBtr0273392 3 1 1 80 3L 17809130 17809148 CCGAGCAGCTATTCTACAC 57 17808971 17809087 CCAGGATCCTAAGGAATCGA 58 NA Drosophila melanogaster 61 cln3 FBgn0036756 FBtr0075167 3 1 1 97 3L 17803100 17803121 GCTCTTCTATATCAAGCACCTC 58 17802967 17803043 AAACCAGTTCGAACAATCCT 57 NA Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 3 2 2 186 3L 17670665 17676047 TGAGTTTCAGAGTGTGCCA 59 17676195 17676215 TTTGTTGACCTCATAGCACTG 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 1 7 7 80 3L 17537429 17537447 GTTCGGTAACGAAGACCGA 59 17537490 17537572 GGCCTCCATAATCTAAGCCA 59 NA Drosophila melanogaster 61 Mip FBgn0036713 FBtr0075241 2 1 1 98 3L 17339143 17342488 TATAGTCAGCTATGGCTCACAC 59 17339066 17339084 CACTGGCCACCAAATTACC 59 NA InUTR Drosophila melanogaster 61 CG6485 FBgn0036706 FBtr0075249 1 1 1 60 3L 17313173 17313191 CACCCTAAAGATCCAGCCA 59 17313131 17313151 CTTCGGATCTGGTAGTTTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075267,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075269,FBtr0075268 1 7 7 80 3L 16956903 16956981 GATTCACAAGGGTCTATTGCG 59 16957023 16957041 TCTCCCAAAGCCCAATCAG 59 NA Drosophila melanogaster 61 CG9701 FBgn0036659 FBtr0075321 3 1 1 85 3L 16726891 16727530 TGACTGCCTCATGTCTTGG 59 16727577 16727597 GTATGAAGATGATCCAACGCC 59 NA Drosophila melanogaster 61 CG9701 FBgn0036659 FBtr0075321 1 1 1 83 3L 16731209 16731819 TTGGCTCAAGGTCTATCCC 58 16731866 16731884 GTAACGATTATCTCGGGCG 58 NA Drosophila melanogaster 61 CG13036 FBgn0036626 FBtr0075416 1 1 1 139 3L 16384711 16384781 ATGTGCTCAATTCTCCAGC 58 16384590 16384608 AAGACGTAGAAACGCTTGC 58 NA InUTR Drosophila melanogaster 61 CG33257 FBgn0053257 FBtr0075378 3 1 1 93 3L 16339425 16339443 GTACGGCCAAGGATTACGT 59 16339804 16339823 ATAGCCATTCCTCTTGTGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0075377 1 1 2 125 3L 16335202 16335220 TGCTGAGGCTAAGAAGGAC 59 16335309 16336904 TAATAGGCACGCCCTTGAG 59 NA Drosophila melanogaster 61 Nplp3 FBgn0042201 FBtr0075369 3 1 1 227 3L 16311156 16311303 AAATGTTCAAGCTGTGCGT 59 16311494 16311512 GAGGAGAAGGATGCACCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13062 FBgn0036603 FBtr0075368 3 1 1 203 3L 16307571 16307713 CAGTTGAAAGTAGTGTCGCT 58 16307879 16307897 CTTGATTATGTGGTGCGGC 59 NA DesignRelaxed Drosophila melanogaster 61 th FBgn0260635 FBtr0075500 3 1 3 106 3L 16033154 16039592 CCGTCAAGTTTCGACTTCAG 59 16033067 16033086 GATCAGCTACAACAGATGCC 58 NA InUTR Drosophila melanogaster 61 CG5830 FBgn0036556 FBtr0075521 1 1 1 81 3L 15997046 15997067 CAATAATAACGCAAGTTTCCCG 58 15988933 15997005 CGATCCACATCGTCTTTGTC 59 NA Drosophila melanogaster 61 DNApol-delta FBgn0012066 FBtr0075522 1 1 1 100 3L 15980701 15980773 AAGAAGCCCAGGAATCCTG 59 15980619 15980637 CCCATTAGCAGAGTCTGGT 58 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100034,FBtr0100037,FBtr0100035,FBtr0301510,FBtr0100036 3 5 5 81 3L 15860577 15860666 GAAAGCAGTTTGAAATACGAGG 58 15860517 15860538 GAGACTTATTGCCATATTGCAG 57 NA Drosophila melanogaster 61 comm2 FBgn0041160 FBtr0075580 2 1 1 186 3L 15692457 15692475 ATCGGGTGATTCTGGACAG 59 15691548 15692308 GCATTGTTGCGATAATTGCG 59 NA Drosophila melanogaster 61 CG7275 FBgn0036500 FBtr0075547 2 1 1 97 3L 15492985 15493062 CGAGGATTGCAACCTTTATACC 59 15493118 15493138 AGTAGTCAACATCGGTGACAG 59 NA Drosophila melanogaster 61 CG32147 FBgn0047178 FBtr0075647 1 1 1 80 3L 15136796 15136905 CAGCCATATCTTGTTATCCATGTC 59 15136739 15136757 CTTGTGATTGTACGCCAGC 59 NA Drosophila melanogaster 61 Pdi FBgn0014002 FBtr0075650 2 1 2 184 3L 15132620 15134451 GATTAGTGTGCATGACGCC 59 15132454 15132472 GGAAGAACTTCAGAGTGGG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Rpn12R FBgn0036465 FBtr0075669 3 1 1 60 3L 15035382 15035403 ATCACCATCAAGGATTATGCTG 58 15035343 15035364 AGTAGTAGGTATTTAACTGGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mop FBgn0036448 FBtr0075700 3 1 1 80 3L 14764771 14764857 GGATTCGATTCACCTATCGTG 58 14764711 14764729 CTCATTGCCCTCTATCGCA 59 NA Drosophila melanogaster 61 CG6650 FBgn0036402 FBtr0075769 3 1 1 80 3L 14025986 14026063 CATGTCTAGAAAGCTGCGG 58 14026105 14026125 AGATGGATGTCATCGTTTGGA 59 NA Drosophila melanogaster 61 CG11267 FBgn0036334 FBtr0075875 2 1 1 138 3L 13009566 13009584 GCAAAGTACTTGAGGGCAC 59 13009754 13009772 TCTAGGTTCACCTTGGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10943 FBgn0036320 FBtr0075936 1 1 1 60 3L 12855638 12855658 AGGATAGATTTGATGCTCAGG 57 12855598 12855617 AAGGTTGACAATTCCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32110 FBgn0052110 FBtr0075931 2 1 1 60 3L 12801956 12801976 ACAATGCCAGTTCTAAAGCAG 59 12801998 12802016 CCATTACAACGTCCTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sti FBgn0002466 FBtr0075970 1 1 1 80 3L 12506917 12506994 AGTATGCCTTTCAGGATAACGA 59 12506858 12506877 GTGACATCAAGCTGAGAAGG 58 NA Drosophila melanogaster 61 CG10681 FBgn0036291 FBtr0075957 1 1 1 95 3L 12495019 12495037 GAGACCATGATACGGGCTC 59 12495151 12495170 CAAACGACTCTGCGATAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pbprp1 FBgn0011279 FBtr0075955 3 1 1 80 3L 12389448 12389469 AATCCTACGATCATAAAGCAGG 58 12389507 12389593 GTCAATCACATCTACAGAAGCT 58 NA Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 3 3 3 93 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730944 11730962 TCGGTCACGTACTTCAGTG 59 NA Drosophila melanogaster 61 Sgs8 FBgn0003378 FBtr0076160 1 1 1 94 3L 11502447 11502465 AGCAACAACCATGAAGCTG 59 11502302 11502320 ATGAACAATCCTTGCAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Vha16-3 FBgn0028667 FBtr0302359,FBtr0076090 1 2 2 60 3L 11466706 11466725 ATCATTGCGATCTATGGCCT 59 11466748 11466766 ACGAATCCGACAGAGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32071 FBgn0052071 FBtr0076231 2 1 1 104 3L 11096906 11096924 TATCCCTGGTCATCTTGGC 58 11096820 11096838 AAGTGGATGAGCTACTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32065 FBgn0052065 FBtr0076284 2 1 1 195 3L 10438606 10438625 CTGAGCTGAGAAGTGAAACC 58 10439994 10440466 CTTGTCTCTTGGCGAACTG 58 NA Drosophila melanogaster 61 CG3408 FBgn0036008 FBtr0076426 1 1 1 110 3L 9501402 9501421 CGGTACTTAGACCTGAAGGG 59 9501225 9501331 GATGCTGACTGTATTCTTGGC 59 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 3 2 2 80 3L 9451447 9451520 TCTATGCGGAGCTTAATTCAG 58 9451561 9451580 GCTTAAAGGTGGGATTGAGG 58 NA Drosophila melanogaster 61 dally FBgn0011577 FBtr0076583 3 1 1 83 3L 8870393 8879384 AGTTCCAAAGTCACGTCCT 58 8879428 8879449 CCATACGGGTATAAACCTTCGA 59 NA Drosophila melanogaster 61 CG13305 FBgn0035921 FBtr0273348,FBtr0273349 3 2 2 158 3L 8638385 8638866 GGAAACCAAGTACTTTCATGAC 57 8638165 8638184 TGACGATCTGTCCAAATCAC 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089561,FBtr0089566,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089562,FBtr0301155 2 8 13 89 3L 8630658 8630677 AGACTAAGGTCTATCAGCCC 58 8631286 8631376 TGTTTACCACATTGTACGGC 58 NA Drosophila melanogaster 61 CG6282 FBgn0035914 FBtr0076636,FBtr0300194,FBtr0076637 2 3 3 82 3L 8607836 8607854 GGAGACCTATGCGGATCTG 59 8607900 8607976 TCCACAGTCCATCATTGCA 59 NA Drosophila melanogaster 61 CG32355 FBgn0052355 FBtr0076632 1 1 1 60 3L 8590391 8590411 CTACGAGAGTAAACTGGAGGA 58 8590433 8590451 CTCATACTCGCTGTCCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7188 FBgn0035871 FBtr0076711,FBtr0076712 3 2 2 81 3L 8301246 8301264 GGTTAGCGTCATCAACACC 58 8301056 8301201 AAGTTGAGTCACTTGCACG 58 NA Drosophila melanogaster 61 Rab-RP3 FBgn0015793 FBtr0076705 3 1 1 86 3L 8291094 8291112 CTGTTCGTGATGGAGACCT 59 8291161 8291228 GTGTTGGCGTTTAAGTTCGT 59 NA Drosophila melanogaster 61 Nmt FBgn0020392 FBtr0076728 1 1 1 134 3L 8171311 8171329 TGCCGGCTTAAATATCCAG 57 8170712 8170730 GAAACGGCTTGTAGCAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8209 FBgn0035830 FBtr0076753 3 1 1 102 3L 7969666 7969778 GGAACGTGTTGAATATGCAC 57 7969843 7969861 TTGACGGGATGGTATTGGA 58 NA Drosophila melanogaster 61 CG32377 FBgn0052377 FBtr0076820 1 1 1 60 3L 7660201 7660221 TGATGACACCGTAAAGAGACC 59 7660161 7660180 GCTTACCGTTCGCTTTACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0302841,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112693,FBtr0302840,FBtr0112702,FBtr0302843,FBtr0112698 3 11 15 60 3L 7649297 7649489 AGAATATTTGGCTAGACAAGGC 58 7649258 7649279 GTCCAGAGATTCCTTTATTGGT 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0076918 3 1 2 222 3L 7151401 7151419 GATGCATGTCAAGGATGCC 59 7151605 7151687 GAACTGGAACTCCATCGGA 59 NA DesignRelaxed Drosophila melanogaster 61 form3 FBgn0053556 FBtr0091533,FBtr0113469 3 2 2 118 3L 7113843 7113931 AAACCAAGAATATCCCGTGAG 58 7114011 7114029 CTATTGGCGTTGACCAGAC 58 NA Drosophila melanogaster 61 CG9948 FBgn0035721 FBtr0076896 2 1 1 98 3L 6949408 6949431 TCTATAAGAGATCTGGACTCTCGA 59 6949488 6949562 AGAAGTCCACATCACAGCC 59 NA Drosophila melanogaster 61 vvl FBgn0086680 FBtr0076944,FBtr0300260 1 2 2 78 3L 6784211 6784229 CATCATACGCACCATCTGC 59 6784271 6784289 AGAGATGCGACATCTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 vvl FBgn0086680 FBtr0300260 2 1 2 122 3L 6785084 6785102 CATCCGCATCACGATATGC 59 6785188 6785284 CTGCTGGCTTAGATGATGC 58 NA Drosophila melanogaster 61 CG8549 FBgn0035714 FBtr0076943 1 1 1 60 3L 6746312 6746331 AAGGTTCTTTCGTGGAGGAG 59 6746434 6746452 TATGGGTTTGCAGGACCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18586 FBgn0035642 FBtr0300903 1 1 1 80 3L 5866893 5866968 TTGCCCAGATCTCGATCAC 59 5867010 5867030 TATAACTAGCCACTCGCATCG 59 NA Drosophila melanogaster 61 Gen FBgn0027914 FBtr0077176 3 1 1 81 3L 5144434 5144522 TTGGATAGAATGAGAAGCTGG 57 5144373 5144391 TGCAGATGGATTTGTCGTC 58 NA Drosophila melanogaster 61 CG18808 FBgn0042131 FBtr0073361 2 1 1 60 3L 4806569 4806591 GACACCATTACTATTTCCTGCTG 59 4806531 4806549 ATCTATCACGGCTGACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32236 FBgn0046793 FBtr0073369 3 1 1 60 3L 4666270 4666293 ATTATCATACCCATGGGACTATCG 59 4666233 4666254 GATGGTATAGCTGAGAAGTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15014 FBgn0035532 FBtr0073340 1 1 1 60 3L 4321297 4321315 GCCAATGGCAACGATAAGG 59 4321255 4321276 CATCGTCATTAGACTTGGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0073235,FBtr0073236 2 2 4 155 3L 4290904 4290922 ACTTTGGTCAAATCCTGCC 58 4291041 4291121 CGACTACATGCGTCAATGG 59 NA Drosophila melanogaster 61 wit FBgn0024179 FBtr0073279 3 1 1 87 3L 4066268 4066354 CGGAACAGGGAATAAATATCATAGC 59 4066205 4066225 TGTATAAGTCCCGTAGTGTCG 59 NA Drosophila melanogaster 61 CG12605 FBgn0035481 FBtr0073166,FBtr0073167 3 2 3 256 3L 3961756 3961775 GGAACTCGCGTTCAATTCTC 59 3959844 3959862 AATCACCTTGCCATCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10853 FBgn0035478 FBtr0073164 1 1 1 95 3L 3947989 3948065 GTCACAATAATCCCTGGGAG 58 3948123 3948141 AAACAGGAACAGGAACTGG 58 NA Drosophila melanogaster 61 CG14974 FBgn0040694 FBtr0073140 1 1 1 89 3L 3620680 3620751 GGCAGATAATTGCTCCATAGAG 58 3620612 3620631 CCCTCTGGAAGATCATCCAC 59 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 1 5 5 64 3L 3300760 3300778 GTACCACCGATCTGGACAG 59 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12078 FBgn0035426 FBtr0073092 2 1 1 60 3L 3243620 3243638 CATCCTAAACAGTCGCCTC 58 3243578 3243598 CTTGGACCACTTTCCAAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32278 FBgn0052278 FBtr0073033 3 1 1 66 3L 3171099 3171176 TCAAGCAGATCAAGGAATCTG 58 3171204 3171222 TGTAGAGTCTTCAGGCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG2113 FBgn0035384 FBtr0072979 2 1 1 149 3L 2995252 2995328 GGCTGAAAGTCAGGAATCC 58 2995441 2995459 TCTGGAAAGGTCCTCTTGG 58 NA Drosophila melanogaster 61 Mrtf FBgn0052296 FBtr0290068,FBtr0290067,FBtr0072944 1 3 3 82 3L 2724738 2728436 GGACAAGAATAAGGAATCGCTC 59 2724677 2724695 ATGGTATGATGCCCTGCTC 59 NA Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 3 2 2 89 3L 2593242 2593264 CCGCGTAGTCATAATAACATAGG 59 2593313 2593399 GGCCAATTGTTGCAGACTC 60 NA Drosophila melanogaster 61 CG33232 FBgn0035347 FBtr0072918,FBtr0100539,FBtr0072919,FBtr0072920 2 4 4 80 3L 2498019 2498105 CTCTGGAAGATGTGAAGATAAACAC 59 2498141 2498161 AGATCCAGCGATTTACTCCAG 59 NA Drosophila melanogaster 61 CG32302 FBgn0052302 FBtr0072881 1 1 1 60 3L 2269579 2269602 GCTTCCAAATTGATCCTAAGATCC 60 2269621 2269639 TCCGAGCACTGATAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072843,FBtr0072844 2 2 2 112 3L 1965263 1965337 CAACAATGGAGGTGTGGAC 58 1965412 1965431 GATATTGACGCACCAACTCC 59 NA Drosophila melanogaster 61 Aprt FBgn0000109 FBtr0089420 2 1 1 80 3L 1884550 1884699 TCTGTTCCGTGACATATTCG 57 1884489 1884507 CGGATGTGATCAACAAGCA 58 NA Drosophila melanogaster 61 CG7991 FBgn0035260 FBtr0072765 2 1 1 80 3L 1712718 1712736 GTTGCTCCGAATTAGGGAG 58 1712780 1712855 CTGGACAATAGGCATCCCT 58 NA Drosophila melanogaster 61 CG13920 FBgn0025712 FBtr0072761 2 1 1 86 3L 1650775 1650793 TACCCTCGAAATGGTACCG 58 1650839 1650921 TGACCTTATGATAGGGAATCAGC 59 NA Drosophila melanogaster 61 FucTD FBgn0035217 FBtr0072693 2 1 1 105 3L 1417298 1417316 GAATGAGAAGACTCTGCCG 58 1417385 1417459 GTAGTGACTGCAGTCATCG 58 NA Drosophila melanogaster 61 ru FBgn0003295 FBtr0072681 1 1 1 82 3L 1384768 1384786 ACATCATGAAGGGTCTGCC 60 1384832 1386221 ACACGAGAACCTCAAGGAG 59 NA Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 2 2 2 142 3L 1307714 1307732 AGAGATCCCTTTGCAGGAC 59 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 CG13890 FBgn0035169 FBtr0072587 3 1 1 81 3L 851642 851660 CAACGACTTGTCCCAATCC 59 851705 851782 AACCATGGCCTTGAAAGTC 58 NA Drosophila melanogaster 61 snoRNA:Or-aca1 FBgn0082925 FBtr0113530 2 1 1 60 2R 18495069 18495089 TGGAACTTATAGCCGTTTCCA 59 18495108 18495129 ATTGCGACATGCACTTAATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1347c FBgn0086600 FBtr0091610 1 1 1 60 2R 14030761 14030781 CAGACTTGACTTACCATGCAC 59 14030802 14030821 CTCTTCAACTTCTGCACTGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-1153 FBgn0083006 FBtr0113500 3 1 1 82 2R 9445129 9445149 CCACAGTTATGCAATAAACGC 58 9445067 9445085 GCAAAGCTTCTTATCCGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir48a FBgn0053471 FBtr0088081 3 1 1 60 2R 7587369 7587389 GCTATAGATACTTGGCAGCAC 58 7587329 7587350 ACATAAGTGCCTAATGCAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2857 FBgn0035078 FBtr0072419 2 1 1 60 2R 20787754 20787772 GCTCTGGTACAGTTCTGGT 59 20787712 20787730 AGTAGTCAAACTGGTGGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 itp FBgn0035023 FBtr0300186 1 1 4 86 2R 20443018 20443036 ATGTTCTTCCGACTGGACC 59 20443084 20445562 GCATTCTTGCTTGCATAATCG 59 NA Drosophila melanogaster 61 CG16837 FBgn0035009 FBtr0072297 3 1 1 82 2R 20362997 20363018 TCCAGAAGTTCGAGGTTATCAG 59 20363061 20363150 GATCGACTGCGAATAACCG 58 NA Drosophila melanogaster 61 CG3362 FBgn0034988 FBtr0072261 3 1 1 60 2R 20084197 20084215 TCTTCGACCACGTAGAAGC 59 20084239 20084257 ACGAGCACTATGTCAAAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 2 3 3 101 2R 19948508 19948684 AGAAGAACATCAAGCACAGTG 58 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 RpL12 FBgn0034968 FBtr0072174,FBtr0072176,FBtr0072175 1 3 3 100 2R 19948509 19948685 GAAGAACATCAAGCACAGTGG 59 19948747 19948765 AGGTTCCCTTCAACTCACG 59 NA Drosophila melanogaster 61 gammaSnap FBgn0028552 FBtr0072187 3 1 1 80 2R 19935635 19935656 AGTTAACTGAATCCAAGCATCC 58 19935507 19935597 CGGAATCCTCGATCATTATGAC 58 NA Drosophila melanogaster 61 CG10904 FBgn0034945 FBtr0072205 1 1 1 92 2R 19857183 19857201 GATGGGAGCACTTCAAGAC 58 19857046 19857127 ATACCAATTTCTTGCCCGG 58 NA Drosophila melanogaster 61 Alas FBgn0020764 FBtr0072151 2 1 1 109 2R 19853638 19853800 CTGAAGCGAGAAGGTTTCC 58 19853873 19853891 AATTGTTCGATCAGCACGT 58 NA Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 1 2 2 89 2R 19437532 19437550 GACATCAGAAGAAGCGTCC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 bw FBgn0000241 FBtr0114457,FBtr0072117 2 2 2 249 2R 19425226 19425302 GCATCTGTACTTTATGTCCCA 57 19424997 19425015 TTTGATCACCGAATAGGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Or59c FBgn0034866 FBtr0072020 2 1 1 84 2R 19360407 19360426 AGGATCCGAAACTCAGTGAG 59 19360287 19360360 TGGGAGCACTGTATGATGG 59 NA Drosophila melanogaster 61 CG30410 FBgn0050410 FBtr0301852 3 1 1 60 2R 19243079 19243100 ATCTGATACTCGACTACAACCT 58 19243120 19243139 ACGTCTATGTTGGGATTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Klp59D FBgn0034827 FBtr0071968 2 1 1 60 2R 19031675 19031696 GAGACTTACGCTCACAATTTCC 59 19031716 19031735 GCGTGTACTGCTCTATTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3215 FBgn0034825 FBtr0071974 1 1 1 86 2R 19016938 19016956 ACATATTCAAGTCGCCCAC 57 19016811 19016891 CAATGATGTTCCTTAGAGTGGA 58 NA Drosophila melanogaster 61 MED23 FBgn0034795 FBtr0299811,FBtr0071903 2 2 2 60 2R 18780330 18780352 CCCGAATTGAGCTACTATATGAG 58 18780370 18780459 TCTTCCCACTAATTGTGTCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG3649 FBgn0034785 FBtr0071896 2 1 1 90 2R 18735021 18735039 TGTTTGGGATGAGCAACAC 58 18735092 18735161 GATCGATCCGACTCTTTGGT 59 NA Drosophila melanogaster 61 blw FBgn0011211 FBtr0071883 1 1 1 80 2R 18687974 18688084 CAGACTGGTAAGACCGCTC 59 18688128 18688146 CTTCTTGGACTCGTCCTGG 59 NA Drosophila melanogaster 61 CG42565 FBgn0260767 FBtr0301269 3 1 1 81 2R 18548356 18548581 TGCCTATTCCTATGCTGGC 59 18548626 18548644 AGTTGGGACAGTACTGGGA 59 NA Drosophila melanogaster 61 Vps20 FBgn0034744 FBtr0071856 3 1 2 107 2R 18496116 18496199 CGGTTCTGCAATTGAAGCA 59 18496270 18496288 CTTGCTGTAGGCACTTCCT 59 NA Drosophila melanogaster 61 CG3292 FBgn0034710 FBtr0071783 2 1 1 80 2R 18092627 18092645 AGCTTAAGGGCAATACCGG 59 18092501 18092583 AGCAGTATGTCCTGCTCAG 59 NA Drosophila melanogaster 61 CG11170 FBgn0034705 FBtr0071786 2 1 1 60 2R 18065507 18065527 ATGTACTACGTTAGTCCGCTG 59 18065467 18065485 TAGGCACTGGAAATCCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 1 2 2 86 2R 18013771 18013789 AAAGAACATCAGCCTGCAG 58 18013648 18013721 TTTAAGGCTTTCTGCTCGC 58 NA Drosophila melanogaster 61 CG34396 FBgn0085425 FBtr0112644 2 1 2 80 2R 16981402 16987725 ATTTACACGACCATAGGTTACG 58 16987765 16987784 GATGATGGCATAGACGATGG 58 NA Drosophila melanogaster 61 Cht8 FBgn0034580 FBtr0071534 2 1 1 88 2R 16949229 16949308 ACTCCTCAAAGAACGTTGTC 58 16949357 16949377 CGGATCAATATCCTCCATACC 57 NA Drosophila melanogaster 61 otp FBgn0015524 FBtr0110772 1 1 2 174 2R 16774168 16774186 CAACCAATGTCTTCCGCAC 59 16772858 16774030 TACATCATGGAGTCGCCTG 59 NA Drosophila melanogaster 61 otp FBgn0015524 FBtr0290289 1 1 2 95 2R 16773850 16773868 GAACAGTGGCCTAAACTCG 58 16772861 16773791 ATCATGGAGTCGCCTAGAG 58 NA Drosophila melanogaster 61 CG13443 FBgn0034548 FBtr0086239 2 1 1 100 2R 16661258 16661276 CTAATCCAGTCTTGTGCCC 57 16661413 16661432 TTGTAGGCATAGACATCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 ppk6 FBgn0034489 FBtr0086321 3 1 1 92 2R 16133694 16133714 CCAATTGCTATGATGTCACCT 58 16133568 16133640 ATTCCGGAGAGTAGAAGCG 59 NA Drosophila melanogaster 61 CG11048 FBgn0034487 FBtr0086316 2 1 1 148 2R 16128136 16128154 CATCTTCGACCTGAACGTG 58 16128266 16128405 CTGTTGTGGGATCACATGG 58 NA Drosophila melanogaster 61 CG13872 FBgn0034477 FBtr0086341 3 1 1 178 2R 15768101 15768119 GATCGTCCAGAGGATCGAC 59 15767866 15767884 AAATGTACCGACGTCCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7735 FBgn0034446 FBtr0086534 2 1 1 80 2R 15332200 15332218 GCCAATTCTCTTCTACGGC 58 15332262 15332347 TCCAATCTGAGAGCTGCTG 59 NA Drosophila melanogaster 61 CG34045 FBgn0054045 FBtr0302390 1 1 1 86 2R 15220322 15220340 AATGCGCGTGGAAATTAGG 59 15222289 15222479 TTGCCATACAGCATCAACG 58 NA Drosophila melanogaster 61 CG15109 FBgn0034416 FBtr0086574,FBtr0100137,FBtr0299568 1 3 3 81 2R 14946977 14947106 CTCCAATCAAATAAACGCTGC 58 14947240 14947258 CGCATCAACATGAGGACAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Topors FBgn0034410 FBtr0086570 3 1 1 133 2R 14861103 14861121 GAACAGTAGAGCGCAACTC 58 14861218 14861296 GGGCTTTATCTTGCTCCAC 58 NA Drosophila melanogaster 61 Pepck FBgn0003067 FBtr0086701 2 1 2 67 2R 14424571 14424753 TTATCTCCGGCAATGTCTG 57 14424784 14424802 GTACAGACCGCAATTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15068 FBgn0040733 FBtr0086727 2 1 1 82 2R 14277961 14278058 CTTTGGCTAGTGCCAATCC 58 14277897 14277916 CTAATCGCCGCGTATATTGC 59 NA Drosophila melanogaster 61 CG18540 FBgn0034326 FBtr0086762 3 1 1 104 2R 14187042 14187062 ACATGAATCTGCGAATTGAGC 59 14187128 14187207 TACGCATCTCGACCATCAC 59 NA Drosophila melanogaster 61 CG5756 FBgn0034301 FBtr0086785,FBtr0086786 1 2 2 93 2R 13992432 13992597 GACATGAAGGTTATTACGCGG 59 13992359 13992377 AGGAAACCGAATCCTTGGG 59 NA Drosophila melanogaster 61 CG14495 FBgn0034293 FBtr0086810 2 1 1 91 2R 13936742 13936847 GCATCAATAAGAACGGAATCCA 59 13936672 13936691 ATAGTCCTCGTGAAGTCGTG 59 NA Drosophila melanogaster 61 CG10910 FBgn0034289 FBtr0089630 2 1 1 80 2R 13908198 13908217 GAAAGGGAGTTGGTTACGTG 58 13908258 13908346 GAGATTCAGAACGGTATCCAC 58 NA Drosophila melanogaster 61 CG6401 FBgn0034270 FBtr0086882 2 1 1 114 2R 13626559 13626646 GGGCTAAAGACTGTCTTTACC 58 13626465 13626483 CACAGATGGCGTGATTGAC 59 NA Drosophila melanogaster 61 CG4802 FBgn0034215 FBtr0086916 3 1 1 189 2R 13315590 13315682 CCGGTCAAGATTGGTATTATTGG 59 13315831 13315849 CATTGGAGGGCATGATGTC 58 NA Drosophila melanogaster 61 CG11395 FBgn0034200 FBtr0086987 2 1 1 90 2R 13024910 13025007 TGGATATCCGAACCATCATCG 59 13025059 13025077 GAAGACAAAGGGAGGTGGT 59 NA Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087006 1 1 3 80 2R 12984351 12984371 TATAGAAACGACCATAGCACC 57 12982548 12984311 CTTTCTCAATGCAATTCCCTC 57 NA InUTR Drosophila melanogaster 61 ste24a FBgn0034176 FBtr0087059 2 1 1 106 2R 12889345 12889363 CATCATTGGACGCAGACAC 59 12889106 12889277 AGTTTGGTACACTTTCACCTG 58 NA Drosophila melanogaster 61 CG34191 FBgn0085220 FBtr0112384 1 1 1 60 2R 12839853 12839871 TGAAGAGTTCAAGGTTCCG 57 12839895 12839913 GATGCCAATTCCATCGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34460 FBgn0085489 FBtr0112766 3 1 1 81 2R 12714423 12714442 GATAGCCTGTTTGATCACGT 58 12714486 12714560 TTTGCATCCGTTCTTTCCT 57 NA Drosophila melanogaster 61 CG34457 FBgn0085486 FBtr0112763 1 1 1 80 2R 12558753 12558772 CATACACGAATTGGTTCTGC 57 12558810 12558888 GGGAATTGCTAGGTATATCTTCTC 58 NA Drosophila melanogaster 61 Picot FBgn0024315 FBtr0087115,FBtr0087114 2 2 2 80 2R 12544692 12544783 CGGGATATTCCTATTGATGACTC 58 12544634 12544653 GAAGGACGACAAGATGTAGC 58 NA Drosophila melanogaster 61 CG7848 FBgn0034127 FBtr0087160 1 1 1 60 2R 12322965 12322984 ACTATAGATGAACAGGCGGA 58 12322924 12322945 GCACGTTATTGGTAAATGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087147 1 1 5 80 2R 12225862 12225882 TCACAAATCCACAAAGTTCCG 59 12225921 12226967 TATTTAATCCTGAGCTCTGCGA 59 NA InUTR Drosophila melanogaster 61 CG30100 FBgn0050100 FBtr0087140 1 1 1 124 2R 12179210 12179283 AATTCAGCTTTAAGCGCGG 59 12179371 12179389 AGTCCAGATTGGACTTGCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG8443 FBgn0034087 FBtr0087242 3 1 1 84 2R 12079655 12079674 TAAGCTGCTGTACAGAGCTC 59 12079719 12079801 GATGTTGCTATCGATCAGTGC 59 NA Drosophila melanogaster 61 Ptp52F FBgn0034085 FBtr0289985 1 1 1 80 2R 12059817 12059902 CTATGCGGACATATTTCCTTATGAC 59 12059761 12059780 GAGGCATTGATGTAGTCCGA 59 NA Drosophila melanogaster 61 CG8399 FBgn0034067 FBtr0087207 2 1 1 91 2R 11911178 11911259 CCCATATTCTGGGAATTGTTACC 59 11911310 11911328 GAAGCTGACCAGGATCCAG 59 NA Drosophila melanogaster 61 Prosbeta1 FBgn0010590 FBtr0087262 2 1 1 158 2R 11901546 11901633 CATTCGTCAAGAAGGCTGTC 59 11901407 11901425 AAATGAAGCTGGGAGTGCT 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302795,FBtr0302788,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0087271 1 7 13 80 2R 11872867 11872995 GCTCAACAGATCTTAAGCTAACC 59 11872809 11872829 CTTCATTGACTTCCGTGATCC 59 NA Drosophila melanogaster 61 Iap2 FBgn0015247 FBtr0087297 2 1 2 205 2R 11822077 11822312 GAATAGCAAGAAGCGCCAC 59 11821890 11821908 CACTTGATCGCCGTATTCC 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Hex-C FBgn0001187 FBtr0087399 1 1 1 60 2R 11107733 11107751 CGAGAACTTATGCAACCCT 57 11107691 11107709 AGCGACTGTACACTTCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10265 FBgn0033990 FBtr0087421 2 1 1 130 2R 10880921 10881024 GACAGGAGATTCACATCTACG 58 10880811 10880829 CTTTGGTATGGTCTGCACG 58 NA Drosophila melanogaster 61 Cyp6a9 FBgn0013771 FBtr0300128 3 1 1 81 2R 10767788 10767808 ATTGGAAAGTACAACGGAGAG 58 10767674 10767747 GAAGGGTTTCCGATATAACCT 57 NA Drosophila melanogaster 61 Cyp6a17 FBgn0015714 FBtr0087451 2 1 1 175 2R 10762558 10762636 GGTTGTGATGGAAACGCTG 59 10762775 10762793 TGAATATCTCCGGTTCCGG 59 NA Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087445,FBtr0087444 1 2 2 61 2R 10696990 10697008 CTCCTCTTACACCCAGCAG 59 10697095 10697113 AACGCTCATCAAAGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 BEAF-32 FBgn0015602 FBtr0087441 1 1 2 105 2R 10658259 10658277 CTGTTATCCTACAGCGGCA 59 10659316 10659334 TCTTGGCCTTGGTAATCCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG12866 FBgn0033955 FBtr0300764,FBtr0300765 1 2 2 80 2R 10558085 10558164 CGGATAAGAACACCCAGCA 59 10558204 10558226 GAACTCTAGAAATCCTATCGGGT 59 NA Drosophila melanogaster 61 CG12861 FBgn0033953 FBtr0087481 1 1 1 60 2R 10552649 10552669 GTGAAGAAGATGAATCTGCGT 58 10552609 10552630 CTAGCCTCTTGAGTTCTTTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 beta4GalNAcTA FBgn0027538 FBtr0087539 2 1 1 80 2R 10147582 10147601 TCTTTACAACTGTCCACGTC 57 10147642 10147719 ATTGATCGATAAGGCAACCTG 58 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 1 4 4 83 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 CG8067 FBgn0033891 FBtr0087595 3 1 1 120 2R 9871224 9871244 AAAGGTCAAATGTGAACTCCG 59 9871326 9871405 TAGTCCAACGTCTTCGCTG 59 NA Drosophila melanogaster 61 CG13343 FBgn0033882 FBtr0087585 2 1 1 60 2R 9746957 9746975 GTTGGATCAATGGCATGCT 58 9746998 9747017 GTATCTATGGTGCCGTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13334 FBgn0033856 FBtr0087677 1 1 1 60 2R 9446560 9446578 TATCATCTCAAATCCCGCC 57 9446600 9446620 GGGTAGATTGGTTATTCGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4714 FBgn0033819 FBtr0087756 3 1 1 89 2R 9139886 9139906 TGAGTGAGACCTTGAGTATCG 59 9139760 9139835 GATCGGTATTGCGTTCCTC 58 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 3 3 3 68 2R 8810274 8810292 ATGCTCTGCAAACGTTCTG 59 8810391 8810410 GATACTTGAACCAACGGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Lac FBgn0010238 FBtr0087932 2 1 2 133 2R 8341324 8341342 GGACATTCAGGAGACGGAC 59 8352045 8352063 GATAGGCCTCAATGTGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8834 FBgn0033733 FBtr0113073,FBtr0087954 2 2 2 81 2R 8309524 8309598 TGTGCTAGATGATGCAACC 57 8309461 8309480 ATCGTACTCTTGTCCATCAC 57 NA Drosophila melanogaster 61 CG34021 FBgn0054021 FBtr0100076 3 1 1 101 2R 8224700 8224721 CAAAGCCATCGAATATCTACCA 58 8224850 8224870 CTTCCAACCACTTAAGTTGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 2 2 2 115 2R 8186726 8186746 TCTACTATATGGCTGGATGGA 57 8186569 8186649 CAGTCCGAATTTACTGCCA 57 NA Drosophila melanogaster 61 CG13175 FBgn0033693 FBtr0100143 3 1 1 63 2R 8071079 8071158 TGAGGTGGATCTAACAGCC 58 8071185 8071203 GAAGCAATCTTGACCGGAG 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 RpIII128 FBgn0004463 FBtr0087977 1 1 1 86 2R 7927429 7927449 AGAATAGATTCGGTGCCTCTC 59 7927497 7927566 ACTTGGAGCCCATGTACTC 59 NA Drosophila melanogaster 61 CG34231 FBgn0085260 FBtr0112424 1 1 1 80 2R 7873601 7873620 ACAAACGTCTGGAATACTGC 58 7873660 7873780 CAACTGTATAAACCTTGACAGC 57 NA Drosophila melanogaster 61 cuff FBgn0260932 FBtr0088034 2 1 1 117 2R 7774347 7774435 CACAACATTGAATGGGTCTG 57 7774515 7774533 CTTGACCCACCACTTAAGG 57 NA Drosophila melanogaster 61 ths FBgn0033652 FBtr0088030 2 1 1 167 2R 7695557 7697412 TTAGTTGGCATGAGGGAGC 59 7697543 7697561 GAACATGTAGCAGGCATCG 59 NA Drosophila melanogaster 61 Tsp47F FBgn0033629 FBtr0088152 2 1 2 95 2R 7265746 7266040 GTAACGACATGCGAATCTCC 59 7265670 7265688 CTCGACCTTCGACAAAGTG 58 NA Drosophila melanogaster 61 iotaTry FBgn0015001 FBtr0088125 2 1 1 60 2R 7244327 7244345 GAATTATTGGCGGAAGCGA 58 7244367 7244387 ATCTGAATAGACACCTGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30031 FBgn0050031 FBtr0088123 1 1 1 60 2R 7238628 7238646 GTCCTCCTTCAAGAACCAC 57 7238670 7238688 GATGGCAATGTCGTTGACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13226 FBgn0033594 FBtr0088108 1 1 1 60 2R 7132083 7132106 CCCAACTACGGTTATAACTATGGA 59 7132125 7132143 AGTAGTTCTGCCCATAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13216 FBgn0033591 FBtr0088193 1 1 1 60 2R 7126002 7126021 GCACCCATGTATGGAAACTC 59 7125961 7125979 GCACAAATCCATTAGGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13231 FBgn0033580 FBtr0088203 1 1 1 167 2R 7033874 7034025 TGAAATTCACTCTGCTGCT 57 7034156 7034174 CAGCTATGTAGTGCGAGTG 58 NA Drosophila melanogaster 61 luna FBgn0040765 FBtr0088210 3 1 1 88 2R 6878625 6987050 ATCAATGGCAACAGACCTG 58 6878555 6878573 ATTGTCCAGATTGCTGTGC 58 NA DesignRelaxed Drosophila melanogaster 61 Mat1 FBgn0024956 FBtr0088255 3 1 1 60 2R 6626964 6626985 GACTACAATAAACGTGAGGAGG 58 6626925 6626946 CCTCCAGATAGTCATTGTACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33477 FBgn0053477 FBtr0088320 1 1 1 60 2R 6296747 6296765 TCCATTTGGTCGCTTTCAG 58 6296705 6296723 AAACGGCTTACGACTTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ndg FBgn0026403 FBtr0088349,FBtr0088350 1 2 2 80 2R 6208550 6208632 GATCCCTACAGGGAGAAACTG 59 6208674 6208692 AGTTCCGTCCAGGTTAGAC 58 NA Drosophila melanogaster 61 Obp46a FBgn0033508 FBtr0088359 3 1 1 96 2R 6199253 6199417 ATGCATGATTTCTGCTGCG 59 6199175 6199194 CTTCATCCGTCTCGTATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 1 2 2 80 2R 5772394 5772475 TACGGCAGGTCTATTCTTACG 59 5772334 5772355 ATAGTATCCAGACTGTGGACAC 59 NA Drosophila melanogaster 61 CG1667 FBgn0033453 FBtr0088479 1 1 1 82 2R 5731852 5731870 TCAAACTTTCACTGCCCGA 59 5731910 5731986 GAAGGTAACATTATTCTTGTCCTCG 60 NA Drosophila melanogaster 61 hebe FBgn0033448 FBtr0113061 2 1 4 60 2R 5717356 5721025 CTCCAATTATAGAGCGAACGA 57 5717316 5717334 TGAATCTGGTCGTGATCGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33774 FBgn0053774 FBtr0091775 3 1 1 74 2R 5287557 5287763 AGAACGTGTTACTGTCTGC 57 5287501 5287519 AGAAATACGCCCAGAACGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)03659 FBgn0010549 FBtr0302504 1 1 1 80 2R 5282557 5282578 ATTCCACAACTTGGTCAATCAG 59 5282616 5282701 GAGGATTCAAATGTCTCTTGGG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302603,FBtr0302604,FBtr0088605,FBtr0088604,FBtr0088601,FBtr0112897,FBtr0301511,FBtr0088603,FBtr0088602,FBtr0302602 3 10 10 99 2R 5141850 5141870 GGAGGATGTTAAGAAACAGGC 59 5141704 5141790 CAAGTGGTTAATTGTCGGCA 59 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0300501,FBtr0088559 1 2 2 107 2R 4957037 4957055 ATCCTGAGCATCCAGAACC 59 4957125 4961588 GATATCGTTGAGTCGCTGAG 58 NA Drosophila melanogaster 61 CG13747 FBgn0033364 FBtr0088660 2 1 1 123 2R 4905717 4905802 GCTACTGATCAATTTGTTGACC 58 4906005 4906026 AGGATAAATTAGGCAGCTTGAG 58 NA Drosophila melanogaster 61 CG30349 FBgn0050349 FBtr0088650 2 1 1 86 2R 4796518 4796593 GATCAGGCGATGATACAAGC 59 4796642 4796660 GACATAATCGAGCGGTAGC 58 NA Drosophila melanogaster 61 sns FBgn0024189 FBtr0111043,FBtr0088635 1 2 2 80 2R 4719100 4719178 CGTTGTGGAATACGGAACC 58 4719222 4719240 CAGGAGAGCATTGCATCCT 59 NA Drosophila melanogaster 61 CG30357 FBgn0050357 FBtr0088721 3 1 1 60 2R 4608893 4608911 AATAAGGATGTCGAAGCGG 57 4608851 4608872 TTAGCTCATCATTCATCTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8738 FBgn0033321 FBtr0088705 1 1 1 106 2R 4584620 4585165 GCGATCAGATAGAGGAGGG 58 4585235 4585253 ATCCAGCTGGTAGTAGAGC 58 NA Drosophila melanogaster 61 CG14749 FBgn0033316 FBtr0088695 2 1 1 60 2R 4517189 4517208 CGGACATTTACCTTAAGCGT 58 4517231 4517249 CTAATGATCACAGCTGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30371 FBgn0050371 FBtr0088798 2 1 1 99 2R 4155780 4155885 GGGAAATCCTTCCAGTTCC 57 4155699 4155719 GATATCATTGTTTACGTCGGG 57 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088812 2 1 4 123 2R 4035889 4043926 GCACGAGAATCAGTAACAGG 58 4035785 4035804 GCATGATTGACTGGGATTGG 59 NA InUTR Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088883,FBtr0088884 1 2 2 97 2R 3818858 3818878 AGCTAAAGAACAATCAGCCTG 58 3818721 3818801 CACATAGTTCCATTTCACGGT 58 NA Drosophila melanogaster 61 CanB2 FBgn0015614 FBtr0088930 3 1 1 190 2R 3674033 3674745 TGTGTTCCAATTTCGACGC 59 3674899 3674917 CTCCTTGAAGTCCACCTCG 59 NA Nonspecific Drosophila melanogaster 61 CG1358 FBgn0033196 FBtr0088950,FBtr0088948,FBtr0088949 1 3 3 80 2R 3490154 3490638 TTGGATAAAGTGGGTCTTCG 57 3490093 3490111 CGAGAAGACCTTGATCCAG 57 NA Drosophila melanogaster 61 CG2144 FBgn0033187 FBtr0088904 1 1 1 80 2R 3408332 3408350 GATCTGCTCTCCGAATCCC 59 3408394 3408464 AAGGGATGTCGATGTGGTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111064,FBtr0111093,FBtr0111070,FBtr0111098,FBtr0111087,FBtr0111063,FBtr0089016,FBtr0111072,FBtr0111084,FBtr0111066,FBtr0111053,FBtr0111090,FBtr0111086,FBtr0111058,FBtr0111050,FBtr0111061,FBtr0089020,FBtr0111082,FBtr0111079,FBtr0111076,FBt 2 59 59 80 2R 3210579 3210598 GGACAGTCCTCAATCTACAC 57 3210453 3210538 GTATCGACGATATTGGTCCTC 57 NA Drosophila melanogaster 61 CG12831 FBgn0033141 FBtr0300063 1 1 1 80 2R 2960755 2960773 TTCCTGCACAATCTCTTCG 57 2960636 2960712 TCCAACGGAGAAGTTAATGC 58 NA Drosophila melanogaster 61 Tsp42Er FBgn0033139 FBtr0089036 1 1 1 80 2R 2953301 2953320 AAATGGAGACCCAGTACGAG 59 2953362 2953438 AGGCACCTATCTCAATGACC 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302577,FBtr0302578,FBtr0302034,FBtr0302579,FBtr0302035,FBtr0113470 3 6 6 95 2R 2821425 2821583 CATATCACGAAAGAGCTGTCC 59 2821350 2821368 CATGTTCACATAGGTGGGC 58 NA Drosophila melanogaster 61 dream FBgn0033051 FBtr0086028 1 1 1 163 2R 1909384 1909457 AAACAGTGCGAATGTTGCA 59 1909239 1909257 CTTAAGCGTCCTATTGCGC 59 NA Drosophila melanogaster 61 mle FBgn0002774 FBtr0100576,FBtr0086031,FBtr0086030 2 3 3 81 2R 1866871 1866889 GACCTTCCTGTCGTAAACC 57 1866167 1866829 TACGGCTTAAGTTCACAATGAG 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 1 4 4 80 2R 1435421 1435505 ATGCACATGTATGTTATGCGTC 59 1435546 1435564 CATTTCGTAAGGATGCGGG 59 NA Drosophila melanogaster 61 CG42345 FBgn0259247 FBtr0299921,FBtr0299918,FBtr0301063,FBtr0299920 1 4 4 167 2R 1311592 1311615 CCACTTAGATTTCTCTACTAGTGC 58 1311741 1323171 CATACTTGACACGCAGCTC 59 NA Drosophila melanogaster 61 CG10395 FBgn0033019 FBtr0086087 1 1 1 139 2R 1238319 1238399 GAAAGAAGGTTCTAAGGATGCAG 59 1238498 1238516 TTCTCGTGCGTCTAAGAGG 59 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081 2 1 3 177 2R 1032363 1035724 AACGATTTATCGCTGTTGGG 59 1035861 1035882 CTGAAGTTATTGGGTTTGACGA 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp6t2Psi FBgn0041336 FBtr0081529 3 1 1 80 2L 21283277 21283297 CACCAACTTAGCTATGACACC 58 21283044 21283235 GGGTCAGATCGATTGTGGA 59 NA Drosophila melanogaster 61 His1:CG33855 FBgn0053855 FBtr0091859 1 1 1 60 2L 21521831 21521850 AGTTGAGAAGAAAGTGGTCC 57 21521873 21521891 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33840 FBgn0053840 FBtr0091844 1 1 1 60 2L 21496801 21496820 AGTTGAGAAGAAAGTGGTCC 57 21496843 21496861 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0081452 2 1 2 80 2L 20820562 20820642 ACCTATCGAATTTCTGCTAGGA 58 20820503 20820524 CGTCAGAGTGTTAAATACGGTC 59 NA Drosophila melanogaster 61 CG2614 FBgn0032873 FBtr0081388 1 1 1 80 2L 20658588 20658676 ATGTCGCAATGAAGATATCCAC 59 20658715 20658735 GGACAACTCATTCCCAAACTG 59 NA Drosophila melanogaster 61 CG15130 FBgn0032860 FBtr0081366 1 1 1 63 2L 20424292 20424310 AGAACTCCGAAATGGACGA 58 20423246 20423264 AGATAGTCGCTCTGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG16798 FBgn0032856 FBtr0081371 3 1 1 82 2L 20377583 20377811 GAGAATGAAGCCGTTCTGC 59 20377519 20377542 CTGATGATTATCACAGATAGCGAG 59 NA Drosophila melanogaster 61 CG16798 FBgn0032856 FBtr0081371 1 1 1 80 2L 20377583 20377811 GAGAATGAAGCCGTTCTGC 59 20377521 20377544 GATGATTATCACAGATAGCGAGAC 59 NA Drosophila melanogaster 61 La FBgn0011638 FBtr0081374,FBtr0081373 1 2 2 270 2L 20349193 20349211 ATACGCCCAGAAGAACGAG 59 20348870 20348959 GAACTTGAGCTTGCCTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 bwa FBgn0045064 FBtr0081331 3 1 1 95 2L 20069436 20069454 GGAAGCCCATTGTTAACGC 59 20069512 20072370 CCCTCTGGTCACTAACTCTC 59 NA Drosophila melanogaster 61 CG13078 FBgn0032809 FBtr0081256 1 1 1 60 2L 19564557 19564575 CTAACTGTGCGTTACTCCC 58 19564599 19564617 CAAGGATCTGAAGGACCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42490 FBgn0086200 FBtr0300445 1 1 1 80 2L 18666610 18666696 GACTTACTCATGTCTACTACTGTC 58 18666735 18666753 TTAGCAACAAGTCCATGGC 58 NA Drosophila melanogaster 61 CG10413 FBgn0032689 FBtr0081080 1 1 1 80 2L 18602872 18603721 GCCACCAATAACACGATACC 59 18602811 18602831 ATTCAGCCCTGTATAGTCGAG 59 NA Drosophila melanogaster 61 CG15155 FBgn0032669 FBtr0081048 1 1 1 80 2L 18155459 18155482 CTCAGGTGATTAATGATCAATGGG 59 18155519 18155601 CATCTGGAGCCAGAATTTGAC 59 NA Drosophila melanogaster 61 CG15147 FBgn0032654 FBtr0080988 3 1 1 60 2L 17625956 17625974 TATGGACTGGACTAAGGCG 58 17625914 17625932 AGAATGTCGTCCACATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5131 FBgn0032644 FBtr0080984 1 1 1 150 2L 17485090 17485110 CAATAACGACATGGACTTCCG 59 17485222 17485313 CTTGACGCAGTTCTGATGC 59 NA Drosophila melanogaster 61 CG31803 FBgn0051803 FBtr0081010 1 1 1 80 2L 17412179 17412253 CCTACGTTAAGCTGGACCC 59 17412117 17412136 TAAGCTTGACCACTTCAGGG 59 NA Drosophila melanogaster 61 CG17996 FBgn0032595 FBtr0080937 3 1 1 67 2L 16730942 16730960 ATGAGCCTTGAACAACAGC 58 16730840 16730911 GTATCATTTGGATCGCCCA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 3 1 1 63 2L 16366513 16366534 CACAATGTGGAAATTCGAAACG 59 16366554 16366640 CATTATCTTTCAGTGTCCTCACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42266 FBgn0259151 FBtr0299599 1 1 1 80 2L 16339813 16339890 GTAGTCAACAAGAACGATCCAC 59 16339754 16339775 TCCAGGAACTGAATATTGTTGG 58 NA Drosophila melanogaster 61 Syx5 FBgn0011708 FBtr0080831,FBtr0080832 3 2 2 81 2L 16308314 16308401 GAGAAGCTCACAATGTTGGC 60 16308442 16308463 TGATGATATAGGTCAGCTCCTG 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003,FBtr0090006,FBtr0090004,FBtr0090005 2 4 4 80 2L 16179482 16179500 AAATTCTACGTGTGCTCCG 58 16179541 16180154 CACATTGAACAACATGCTTCAG 59 NA Drosophila melanogaster 61 CG31821 FBgn0051821 FBtr0080809 2 1 1 80 2L 15901343 15901416 AAATTAATACAATCCCGCGCC 59 15901283 15901302 GCACTAAAGTGTCCAACTGG 59 NA Drosophila melanogaster 61 CG33310 FBgn0053310 FBtr0080698 3 1 1 60 2L 15028869 15028889 TTGATCCTAGAAACAGCACAG 58 15028908 15028929 TCCAGAAGAGCCATTATACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4103 FBgn0028925 FBtr0080727 1 1 1 60 2L 15009375 15009450 GCTCTCAATGTGATGAATGCT 59 15009335 15009354 GGACAATATCCCGAAACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33648 FBgn0053648 FBtr0091625 2 1 1 86 2L 14524979 14525053 CGACGTAAGTATAGTTGAGTTCAC 59 14525095 14525116 GATTTAATACGGCAACTCTCGT 59 NA Drosophila melanogaster 61 pburs FBgn0032546 FBtr0080634 2 1 1 80 2L 14417112 14417130 CAAATGCGAAGGATTGTGC 58 14416992 14417069 CAGCAGTAGCACTCTTTCAG 58 NA Drosophila melanogaster 61 nimC4 FBgn0260011 FBtr0080592 1 1 1 60 2L 14047744 14047764 ACAGCGGATCATAGTAAAGCA 59 14047783 14047804 GATCTTCTCAGTCTTCTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 He FBgn0028430 FBtr0080616 2 1 1 101 2L 13972601 13972799 CCAATACATAGCAACCGTCC 58 13972519 13972537 GGATTCCGTTTCACTTGGG 58 NA Drosophila melanogaster 61 mRpS23 FBgn0260407 FBtr0080566 2 1 1 80 2L 13834877 13834953 CACAATCTTCACCAGAGTTCAG 59 13834818 13834838 TACACATCGTACCAAATGGGT 59 NA Drosophila melanogaster 61 CG16888 FBgn0032533 FBtr0080572 2 1 1 60 2L 13812860 13812880 TCGGAGTACAATCTATGTCCC 58 13812820 13812839 GCTGGTGATTGAGAATCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 adat FBgn0028658 FBtr0080573 3 1 1 152 2L 13810703 13810722 TAGGACATTTAAGCACACGC 58 13810513 13810591 TCATAGGGCCTTAATTCTTCTG 57 NA Drosophila melanogaster 61 CG7311 FBgn0028848 FBtr0080530 1 1 2 111 2L 13708888 13708983 GATTGAAGCATCCAATATCCG 57 13709056 13709074 ATCATAGTAGACGACGCCA 58 NA InUTR Drosophila melanogaster 61 betaCop FBgn0025724 FBtr0080469 1 1 1 80 2L 13380053 13380073 CAATGTCTATGGACGTTGTGG 59 13380109 13380195 CAATAGTCTTTAGATTGACCTGCTG 60 NA Drosophila melanogaster 61 CG5780 FBgn0032446 FBtr0300273 1 1 1 90 2L 12694362 12694380 GATGACATTCCCGTCATCC 58 12694235 12694308 GTGAGGTGCCAATAGTTGG 58 NA Drosophila melanogaster 61 CG6153 FBgn0032445 FBtr0080394,FBtr0300275 1 2 2 98 2L 12693402 12693483 TCTTCAAGAACCGACCCAG 59 12693545 12693563 AGTACTCGATTTCTCCGCG 59 NA DesignNoJunction Drosophila melanogaster 61 bun FBgn0259176 FBtr0300521,FBtr0300523 1 2 8 84 2L 12536279 12536297 AATGCAGAGTCCGAGACTG 59 12458214 12477123 TGACCAGATCCATTGCCTG 59 NA Drosophila melanogaster 61 Pkd2 FBgn0041195 FBtr0080365 1 1 1 81 2L 12401343 12401362 AAAGAACATGACACCAGCAG 58 12401461 12401537 GTTATTGAGACGAACCATATCCTG 59 NA Drosophila melanogaster 61 CG16997 FBgn0032413 FBtr0302854 3 1 1 60 2L 12111328 12111349 ATCATTAATTCCAACTGGCTGG 59 12111367 12111388 GTACTTGATTCCTATTGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18788 FBgn0042126 FBtr0289986 1 1 1 86 2L 12035124 12035205 CTTGGGATTTACCTTAGTTTGC 57 12035249 12035270 GTATTGCACCTTATGTATTCCC 57 NA Drosophila melanogaster 61 Gr32a FBgn0041246 FBtr0080198 2 1 1 60 2L 11115557 11115577 TTGCGATAGATAACTCCACAC 58 11115670 11115691 ATTACCAAGTATGTTGTGACGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31870 FBgn0051870 FBtr0080138,FBtr0080137 3 2 2 124 2L 10790319 10790337 GTTGAAATTAGCCACAGCG 57 10790473 10790491 GAAGGAGAACTGAGGTCCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6737 FBgn0032294 FBtr0080120 1 1 1 117 2L 10737033 10737245 CTTTCGAAGGCTAGTCAGAC 58 10736935 10736956 GGCAGATAGTAATCCATTTCCA 58 NA InUTR Drosophila melanogaster 61 Dpy-30L1 FBgn0032293 FBtr0080112 3 1 1 64 2L 10733158 10733176 TAAAGCATAGCAACGGGTG 58 10733204 10733222 TTAGGAGTTGTTGTCCACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fatp FBgn0021953 FBtr0300633,FBtr0080133,FBtr0080134 3 3 3 80 2L 10512982 10513000 GCTGGTCTACATCTACACC 57 10512855 10512939 GCGATAAACAGATAACGGGA 57 NA Drosophila melanogaster 61 CG6232 FBgn0032252 FBtr0301168,FBtr0080029 3 2 2 80 2L 10446355 10446531 CTTATGTCAAGGATGACGCTG 59 10446573 10446591 CGGATTCGTTTAGTGTGGC 59 NA Drosophila melanogaster 61 CG13142 FBgn0032251 FBtr0301167,FBtr0273339 1 2 2 80 2L 10440045 10440068 CCTTCATAGATGTTACTCCAAAGG 59 10440102 10440188 GCTTCTCATCTACTTGAGATTTCG 59 NA Drosophila melanogaster 61 CG5091 FBgn0032234 FBtr0080005 1 1 1 148 2L 10381312 10381385 TTTCATTTCAAGTGCACGAG 57 10381494 10381514 CACCAACAATTCATCTCTTGC 58 NA Drosophila melanogaster 61 CG4953 FBgn0032204 FBtr0079984 1 1 1 87 2L 10266842 10266920 GGCACTCAAAGTTATGCGT 58 10266971 10266989 TCTCTGGACCAAATCCGTG 59 NA Drosophila melanogaster 61 Npc1a FBgn0024320 FBtr0079957 2 1 1 80 2L 10218823 10218843 CTCCATTTGGAGTACACATCC 58 10218387 10218781 CATACCAAACGCAGTCCTG 58 NA Drosophila melanogaster 61 ppk11 FBgn0065109 FBtr0100831 3 1 1 83 2L 9773422 9773441 CCGTGTCTACTACGACTCAG 59 9773283 9773380 CCAAAGGTTCCTATGAATGTCAG 59 NA Drosophila melanogaster 61 CG9555 FBgn0032085 FBtr0290045,FBtr0079761 2 2 2 178 2L 8992352 8992373 CCACCATCTACTTCATAAAGCC 59 8992782 8992858 CTGGCATGGAAGGATAAAGG 58 NA InUTR Drosophila melanogaster 61 CG32986 FBgn0052986 FBtr0079734 1 1 1 60 2L 8863108 8863128 TCCTGTCCAAGGTAATTCCTC 59 8863148 8863168 ATTGCACTTATGAATCCTGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13089 FBgn0032052 FBtr0079682 1 1 1 158 2L 8516155 8516175 TGCCACTAAGTATTAAGCTGC 58 8516295 8516373 CATGGGCCATGAATTTCCA 58 NA Drosophila melanogaster 61 CG13087 FBgn0032045 FBtr0079675 2 1 1 123 2L 8476702 8476816 GCAGTCAGTTCCACAACAC 59 8476902 8476921 TCCTGTTCGACTTGAAGTCC 59 NA Drosophila melanogaster 61 grk FBgn0001137 FBtr0079708 2 1 1 80 2L 8431929 8431947 CACAGTCTTCCATTCCTGC 58 8431732 8431886 ATGTAGTCACCATTCCAGCT 58 NA Drosophila melanogaster 61 baf FBgn0031977 FBtr0079535 3 1 1 115 2L 8029724 8029825 ATTCGATATGGCCTACACCG 59 8029903 8029921 AATCGGATGCCTGTTTGGA 59 NA Drosophila melanogaster 61 TepIII FBgn0041181 FBtr0079477 3 1 1 80 2L 7705516 7705537 CTCTTACACGGACTTTAAGACC 58 7705577 7705657 GTTCTTAAGGCGGGAATCTC 58 NA Drosophila melanogaster 61 CG13792 FBgn0031927 FBtr0079520 3 1 1 125 2L 7644765 7644932 AAATATCGGGTGAGCTCCT 58 7644658 7644677 AAAGGCATTATCGATCCGAC 58 NA Drosophila melanogaster 61 CG5155 FBgn0031905 FBtr0079438 1 1 1 100 2L 7390613 7390692 TTACCATGCACCAGAGTGG 59 7390755 7390774 GATATTGCGCAGACAACCAG 59 NA Drosophila melanogaster 61 CG11320 FBgn0031837 FBtr0113026 3 1 1 107 2L 6618250 6618268 TCATCACCAAGAACCATCG 57 6618102 6618179 TTTGGCACATGTACCATCC 58 NA Drosophila melanogaster 61 CG13766 FBgn0031834 FBtr0079330 2 1 1 60 2L 6565209 6565230 CAATGAGCTTCTGAAGATCGTG 59 6565170 6565189 TCATTTCTTATCTCCGCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tectonic FBgn0031783 FBtr0079209 3 1 1 190 2L 6130212 6130231 TAACGTACTGCAACAGTCCT 59 6129908 6130059 TTCGTCGAACCGAGTAGAG 58 NA Drosophila melanogaster 61 CG14000 FBgn0031749 FBtr0079153 3 1 1 60 2L 5909544 5909563 CAGATCGAGAGTGACGAGAG 59 5909503 5909521 TATCCGATTCACTGGTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14013 FBgn0031720 FBtr0079121 2 1 1 80 2L 5553326 5553399 ACAAGATACTATCGACCATCG 57 5553266 5553284 TGTCCAGGTCTATGTAGCC 58 NA Drosophila melanogaster 61 CG7382 FBgn0031708 FBtr0079130 2 1 1 81 2L 5519257 5519275 GCGGATGCAGTTCTATGTG 59 5519139 5519214 CAGTTTACCAGAGTCACTCCT 59 NA Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302567,FBtr0079085,FBtr0302568,FBtr0079084 3 4 5 114 2L 5277020 5277039 TCTACGAGTTATCCGTCACG 59 5276721 5276943 GAACGTTGCACCTGAACTC 59 NA Drosophila melanogaster 61 Msp-300 FBgn0260952 FBtr0091707,FBtr0300470,FBtr0091706,FBtr0300471,FBtr0091705 1 5 5 86 2L 5155463 5155481 TTCTGTGAGAAGACCCTGG 58 5155531 5155603 ATTGCGGAAATGAACCTCC 58 NA Drosophila melanogaster 61 Sfp24F FBgn0259958 FBtr0300304 2 1 1 80 2L 4441917 4441989 TAGAAATGTTGCCGGAGCT 59 4441855 4441876 ATGAGATAGTAACTGTTCCCGA 58 NA Drosophila melanogaster 61 CG10019 FBgn0031568 FBtr0273188 2 1 1 94 2L 3749805 3749823 GGGTGTGGTTATAGCTGGA 58 3749881 3750010 TTGATAGGAACAGCTGCGT 59 NA Drosophila melanogaster 61 Sr-CIV FBgn0031547 FBtr0077560 2 1 1 162 2L 3523272 3523290 CCTATCGCCACTGTATCCC 59 3523062 3523147 GTCGAACTTGTAGGGATGGT 59 NA Drosophila melanogaster 61 CG15406 FBgn0031517 FBtr0077580 2 1 1 80 2L 3309436 3309454 AGCATATTCAAATCGGGCA 57 3309497 3309787 GAAGGTTATCAGAGTGGCAC 58 NA Drosophila melanogaster 61 CG17258 FBgn0031496 FBtr0300814 3 1 1 83 2L 3032946 3032964 GGAAGGCTTCAAACGACTG 59 3032821 3032899 TTCTTTGTGATCAACCGGC 58 NA Drosophila melanogaster 61 Chd1 FBgn0250786 FBtr0077674 2 1 1 84 2L 2980568 2980647 ATCCCGCGATAGATACAGC 59 2980502 2980520 ATGATAGCTGCCTTGACCT 58 NA Drosophila melanogaster 61 CG3165 FBgn0031484 FBtr0077642 2 1 1 80 2L 2977461 2977481 GTGCTGCACAAATTGAATGTG 59 2977520 2977597 GTTGCTCAGACCTGTTATTCTC 59 NA Drosophila melanogaster 61 Cpr23B FBgn0031467 FBtr0077618 1 1 1 77 2L 2838464 2838482 ACGATTTGAGATGGCAGCT 60 2838594 2838612 TAGTTGTACTCCGCTTGGC 60 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9879 FBgn0031444 FBtr0077700 3 1 1 88 2L 2665162 2665181 GGTTTAAGGCGCTAAACCAC 59 2665289 2665307 TTTAGCTGACGTCCCTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3227 FBgn0031434 FBtr0077746 1 1 1 72 2L 2576553 2576637 CCAATATCAGCGCATAGTCAG 59 2576501 2576519 CAGAAACAAGGGCTTGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31948 FBgn0051948 FBtr0077787 3 1 2 60 2L 2416454 2416475 TTTCGATGCTGTTCTCAAAGAC 59 2416415 2416436 AGCTTTACATTTCTTCGCTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Npc2a FBgn0031381 FBtr0077816 3 1 1 154 2L 1988527 1988546 ATCCTCAAGAGGAACACCAC 59 1988663 1988681 TTCAGACCACTGTCCACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31664 FBgn0051664 FBtr0077895 1 1 1 80 2L 1825124 1825194 AAATAACAGGGTCGTGGTG 57 1825062 1825081 AGAAGTTCACCTTCTTGGAC 57 NA Drosophila melanogaster 61 CG14194 FBgn0030996 FBtr0074671 2 1 1 100 X 19089024 19089102 GCTTTCAGGTGGTCATCTG 58 19089163 19089184 AACTATTAGCGCCAGAATAGAG 57 NA Drosophila melanogaster 61 rut FBgn0003301 FBtr0073992 2 1 1 88 X 14694100 14694192 CTGGCACACGATAATCACTG 59 14694031 14694049 TGATCCTTGCGAGGTTCTG 59 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091672,FBtr0091673 3 3 3 60 X 6772499 6772579 GCTCTACAAGGCAAATCGG 59 6772601 6772621 GTTGTAGTTGCGATCGTACTC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pit FBgn0025140 FBtr0084174,FBtr0084175 2 2 2 216 3R 17863397 17863415 TTGTGCAGTACGATCCTCC 59 17863595 17863692 ATCAGTTTCTCCAGCTGCA 59 NA DesignRelaxed Drosophila melanogaster 61 Ppcs FBgn0261285 FBtr0083752,FBtr0083753 3 2 2 87 3R 14967735 14967822 ATACAAGCACAAGCTGGTC 58 14967666 14967684 CAGCTCGTAGGAATCTGTG 57 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615,FBtr0083543,FBtr0083542 1 3 3 80 3R 13953370 13956130 CATTACTGGTTCCATCGAATCC 59 13956171 13956189 CAATGTGACAACACGGGAC 59 NA Drosophila melanogaster 61 mRpL11 FBgn0038234 FBtr0082953 2 1 1 62 3R 10338114 10338193 CTTACCATGCAGCAAATGTG 58 10338218 10338236 CACTTTGATGCCACAGGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 1 4 4 87 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 CG9368 FBgn0036890 FBtr0074942 1 1 3 289 3L 19594927 19594945 ATCGAAACGGAGTCACTGG 59 19595873 19595891 CTTCTCAGCTTGAAACGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4729 FBgn0036623 FBtr0075417,FBtr0075419,FBtr0075418,FBtr0075420 3 4 4 103 3L 16375505 16375523 ACTGGACGGCCTTTATCAC 59 16375196 16375217 TCCATAATTAGATGCCTTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139,FBtr0077137,FBtr0273234,FBtr0113146,FBtr0273233,FBtr0273232,FBtr0077138 1 10 10 113 3L 5543936 5543954 TACTGGCGTTTCTTGTGTC 58 5538159 5538177 ACTTAGCAGAGTAGACGCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14962 FBgn0035407 FBtr0073112 2 1 1 88 3L 3166201 3166221 ACAGAGCAACCTTCTTATCGA 59 3166043 3166151 AAACGCTGCATACGTACAC 59 NA InUTR Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857,FBtr0301465,FBtr0072856 1 3 3 80 3L 1947389 1947408 TCTTCTGAAAGCGGATACCA 58 1947270 1947346 AGCTCCATTGACTCATCGG 59 NA Drosophila melanogaster 61 CG3570 FBgn0035035 FBtr0072317 1 1 1 63 2R 20491715 20491733 CGTAAGAAGGCTACCAGCA 59 20491757 20491778 CATGTATTCCAGTAGCAAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3746 FBgn0034755 FBtr0071929 3 1 1 152 2R 18537031 18537049 CCATCCATCCGGTACTACG 59 18536833 18536915 GAAGAGCGGAAAGATGCAG 59 NA Drosophila melanogaster 61 Tom70 FBgn0032397 FBtr0080311,FBtr0080309,FBtr0080310 3 3 3 82 2L 12037204 12037223 GAACTTTCCATCTGCTGTGC 59 12037051 12037162 GGGATCAGCATAGTCATTAGCT 59 NA Drosophila melanogaster 61 CG13949 FBgn0031288 FBtr0078017 1 1 1 82 2L 855737 855755 CTTCAATCTGTGCACCTGC 59 855801 855876 TTCCAGAGCCTTCAAGGTG 59 NA Drosophila melanogaster 61 Duox FBgn0031464 FBtr0300382 3 1 1 80 2L 2816580 2816598 GTGAATCACTTTGGTCGCC 59 2816456 2816539 TCCTATCTTGGAGACGTATGAG 58 NA Drosophila melanogaster 61 CG15908 FBgn0033085 FBtr0086114,FBtr0299799 2 2 2 77 2R 2555761 2555831 AATCCGACCCTGTCATCTG 59 2555871 2555890 ATAAAGTACTGGTGGAAGCG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf11 FBgn0011291 FBtr0079924 3 1 1 108 2L 9762837 9762917 CGAACGAATGCAGGTTCTC 59 9762747 9762765 TTGCATTAGACGCTTGACG 59 NA Drosophila melanogaster 61 RpS27 FBgn0039300 FBtr0084868 1 1 1 161 3R 21072258 21072276 CTACAGGATCACCACCGTC 59 21072049 21072067 ATTTGTGGTTCATCGCGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Smg1 FBgn0052743 FBtr0070972 3 1 1 81 X 6728147 6728165 GATTCGGATGTCAAGCGAC 59 6728210 6728293 TCAGCTCAGTCTTGTTGGT 58 NA Drosophila melanogaster 61 dpr15 FBgn0037993 FBtr0082549 2 1 1 91 3R 7969208 7969227 CGTAGTCAAACTGGATTCCG 58 7965844 7969155 AATATTCACCGTTCAGCACG 59 NA Drosophila melanogaster 61 retinophilin FBgn0087005 FBtr0078826,FBtr0078825 3 2 2 120 3R 1062887 1062963 GATGATGACATGAGCAGCG 59 1062785 1062803 TGTACTGGCTTTGACCCTG 59 NA Drosophila melanogaster 61 CG3566 FBgn0029854 FBtr0089870,FBtr0089869 3 2 2 63 X 6170579 6170597 AAGGTCTACGATGTGACCA 58 6170461 6170479 CATCCACCAGGGATTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13405 FBgn0035097 FBtr0072541 1 1 1 60 3L 75029 75047 ATGAGAGCGATGAAGACGA 58 74987 75005 ACCACCTCCTGATACTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17601 FBgn0031197 FBtr0077361 3 1 1 60 X 21949341 21949359 CTGAAGTCTGTGGTGAGCA 59 21949383 21949401 CAAGACGGTTACGATCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12702 FBgn0031070 FBtr0074809 3 1 1 108 X 19654452 19654528 TAGCAAAGCATGTGTCTGC 58 19654362 19654381 AAGATCGAGCTTAGATTGCG 58 NA Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 3 1 1 68 X 19600131 19600211 GATCCTCGTCTCAAGGAGG 59 19600243 19600261 ATATTCGGCATGGTCAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG14222 FBgn0031043 FBtr0074763 1 1 1 80 X 19516413 19516432 TGGCTACATCATATACCGCA 58 19516282 19516370 AAGGCCTTTCTCATGTCGT 59 NA Drosophila melanogaster 61 psh FBgn0030926 FBtr0074629 3 1 1 102 X 18379398 18379416 CAACACCGATGCCAATACG 59 18379256 18379335 GATCTTAACGCTTCGTATGACG 59 NA Drosophila melanogaster 61 CG8611 FBgn0027602 FBtr0074440,FBtr0074439 2 2 2 142 X 17314082 17314100 GGTGAACTTCCATCACGAC 58 17313898 17313978 AGCCATGTAGTTTGAAGAAGC 59 NA Drosophila melanogaster 61 CG34327 FBgn0085356 FBtr0112529 2 1 1 69 X 17117361 17117380 CTTTGGGAAGCTTAAGCAGC 59 17117311 17117329 GAGGAACCACCAGATGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16700 FBgn0030816 FBtr0074383 1 1 1 80 X 16991184 16991273 CAATCTGGGTGATACCATACTG 58 16991314 16991332 AACTGCAGAGGATAACCGA 58 NA Drosophila melanogaster 61 para FBgn0260993 FBtr0111022,FBtr0074298,FBtr0290121,FBtr0111023 1 4 4 80 X 16407799 16407818 ATCATCACCACAATTCTCGT 57 16403728 16407758 GAATATCACCTCAGTGGACTC 57 NA Drosophila melanogaster 61 Nipsnap FBgn0030724 FBtr0074258,FBtr0074257,FBtr0074259 3 3 3 83 X 15965200 15965278 GAAATGCGCTCATACCGAC 59 15965135 15965154 GTGCTTGCGATAGTTGATGG 59 NA Drosophila melanogaster 61 Gbeta13F FBgn0001105 FBtr0074106 3 1 6 81 X 15754269 15755416 AAGTTAACACTGCGTAACACAG 59 15755457 15755476 GATGATCACGCTTGCATACG 59 NA InUTR Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0074101,FBtr0074100,FBtr0112827,FBtr0074099,FBtr0112824,FBtr0301543,FBtr0301544,FBtr0112825 1 9 9 80 X 15717652 15717671 TATCACCGGCATCTATTCGT 58 15717712 15717802 TTGCCGTATATCAACAGTCTC 58 NA Drosophila melanogaster 61 CG8959 FBgn0030691 FBtr0074192 3 1 1 126 X 15676030 15676688 TAGCTCGAGAGTTCGAAGG 58 15675922 15675941 TCCTTGTTTCCAGTGTTCAG 58 NA Drosophila melanogaster 61 CG8206 FBgn0030679 FBtr0074085 1 1 1 60 X 15633865 15633884 GACAATCTGGGACTGTTCAC 58 15633905 15633925 TACTGATTCCAGAGCTAATGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11679 FBgn0030678 FBtr0074202 3 1 1 60 X 15632015 15632035 AGACTCCATAGAGCATCTCAC 58 15631975 15631993 CCGCGAGATTCTTAATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5599 FBgn0030612 FBtr0073964 3 1 1 104 X 14981894 14981912 TCTGAATGCACTGGTGGAG 59 14981980 14982061 TAGGTACCGCCAATCACTC 58 NA Drosophila melanogaster 61 CG32590 FBgn0052590 FBtr0073988 2 1 1 81 X 14732791 14732865 GGAATACGGCATACAAGCG 59 14732728 14732748 TGAAGCCTTGATCATTTCCTG 58 NA Drosophila melanogaster 61 rut FBgn0003301 FBtr0073992 3 1 1 89 X 14690142 14691332 ACAATAAATCCCAGTCGAAGGT 59 14690074 14690092 GATTCGTTGGCTGATGGTG 59 NA Drosophila melanogaster 61 CG1434 FBgn0030554 FBtr0073903 1 1 1 98 X 14133631 14133718 TCCCAGTGATAATCATCTGCC 59 14133778 14133796 AATTTGTCACACTGCTGCG 59 NA Drosophila melanogaster 61 CG11162 FBgn0030509 FBtr0073811 2 1 1 86 X 13571586 13571604 TTCGATGAGCGATCATACG 57 13571653 13571742 TAGTTGAACTTGGCATGGTG 58 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 2 1 1 70 X 12600718 12600737 ATATCTTTGCCGTACTGCTG 58 12600770 12600923 AAATGAGCGGCAGATTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073662 3 1 3 168 X 12467836 12475612 CAAAGCAGAGCACATGTCTC 59 12467372 12467390 TACTTCGGAGCTGGTAACG 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300201,FBtr0300202,FBtr0300204,FBtr0299860 1 7 7 97 X 12211424 12212079 TTTGCCGAGACTCAGATCG 59 12212140 12212158 ATGCTCAGATAGCCACTGG 59 NA Drosophila melanogaster 61 CG10347 FBgn0030342 FBtr0073602,FBtr0073603 1 2 2 109 X 11747508 11747526 ATCCAATGGAAGCTCCACC 59 11747358 11747436 GGTCAAATTGAAGCGTACCA 58 NA Drosophila melanogaster 61 CG15201 FBgn0030272 FBtr0073439 2 1 1 159 X 11038401 11038419 TTCTCAAGTATCTGCCGCT 58 11038673 11038691 GTGAAGCGATCCTTGTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG15306 FBgn0030191 FBtr0071471 1 1 1 82 X 10225511 10225585 ACTTTCTTTGGCTTGTAGACAC 59 10225450 10225468 AATTATGCGTGACGGTCAC 58 NA InUTR Drosophila melanogaster 61 CG32694 FBgn0052694 FBtr0071410 2 1 4 80 X 9893262 9893282 GAATCATTGATAGCCGATCGC 59 9893322 9894393 GTCGATTTCCTTGGTGATGTC 59 NA Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 1 2 2 197 X 6964964 6965450 AAGAGGTGGACTACGTACC 58 6965609 6965629 CATAGACAATGATCACCACCA 57 NA DesignNoJunction Drosophila melanogaster 61 inx7 FBgn0027106 FBtr0071035,FBtr0071034 3 2 2 166 X 6886130 6886220 GTGCTTCTACAGAAATGTCAC 57 6885984 6886004 CCTTCTTGAATAGGAACTCCG 58 NA Drosophila melanogaster 61 shf FBgn0003390 FBtr0070978 3 1 1 85 X 6666122 6667101 CGAAGGTGGTATTTGCAAGG 59 6666056 6666074 CGTAGTAACCCTTGGAGCA 59 NA Drosophila melanogaster 61 CG14438 FBgn0029899 FBtr0070961,FBtr0070962 1 2 2 82 X 6662298 6662318 TCAAGATGTGGACATGATCGT 59 6662362 6662448 CCAATTTAGGCGCCTTCAG 59 NA Drosophila melanogaster 61 Spx FBgn0015818 FBtr0070894 2 1 1 97 X 6149974 6150067 CAAGATGCCACCATCTATGC 59 6150127 6150203 TGTACGTTCACCACTGGTC 59 NA Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070874 2 1 2 93 X 6114443 6115423 TTGCGAAGATATGGCTCTG 57 6115480 6115498 GATCAGCTCCAGAAAGACC 57 NA InUTR Drosophila melanogaster 61 Tsp5D FBgn0029837 FBtr0114466,FBtr0070888 2 2 2 153 X 5964445 5964464 CCTACGAGGATTGGTATGAC 57 5964221 5964329 GACGGATTCTCAGATCTGC 57 NA Drosophila melanogaster 61 CG3097 FBgn0029804 FBtr0070836 2 1 1 97 X 5661171 5661189 GAGATCCGCACCAAATTCC 59 5660887 5661113 GGATTCTCCGAGATTCTAAGCA 59 NA Drosophila melanogaster 61 CG6903 FBgn0029737 FBtr0070723 3 1 1 81 X 4813359 4813490 GACGAATGCTACACGTGTC 59 4813535 4813553 GTAACGGTTCAACGACGAC 59 NA Drosophila melanogaster 61 dgt4 FBgn0026085 FBtr0070642 1 1 1 60 X 4008708 4008728 GCTCTAAGAAGTTTGCGTACC 59 4008750 4008768 TCATGCCCATCTCCATACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2709 FBgn0024977 FBtr0070486 1 1 1 204 X 2621217 2621235 TACATTAAGGCGGAAGTCG 57 2621467 2621485 TGAAGCTGGTGATTTGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32797 FBgn0052797 FBtr0070461 3 1 1 60 X 2319243 2319261 CTCGATGATTTCGAAACGC 57 2319201 2319219 CAGCATCAGTGAGGTAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42248 FBgn0259100 FBtr0299512,FBtr0299511 1 2 2 83 X 712813 712891 CGATCCTAACTGTGTTCTGTG 58 712750 712768 GTGTGCATAGAGGAAAGCG 59 NA Drosophila melanogaster 61 CR41550 FBgn0085803 FBtr0114257 1 1 1 221 U 9116538 9116557 TCCTAATGTATGTTGTGCGT 57 9116336 9116357 CAACGCGAATATACACATACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR41621 FBgn0085827 FBtr0114285 1 1 1 60 U 8909120 8909138 GCAAGGTGTTGTAAGTGGT 58 8909160 8909180 CAAAGGATAAGCTTCAGTGGA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5.8SrRNA:CR40454 FBgn0250731 FBtr0114184 1 1 1 60 U 3653537 3653555 TGAAGAACGCAGCAAACTG 59 3653495 3653515 AATGTCGATGTTCATGTGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42442 FBgn0259873 FBtr0300170 1 1 1 81 U 9728471 9728489 CATCTTCTTACGCAGCTGC 59 9728408 9728429 ACAACCAGGACTATATTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42429 FBgn0259860 FBtr0300157 3 1 1 285 U 8043087 8043105 GAGCCCGTAGGTAACTAGG 58 8043354 8043372 GTGAATCATGCCGTACCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 2 4 4 109 4 1210219 1210237 AACCGATTTGAGAACGGTG 58 1210308 1210519 GCTTTGCTTATTCCAGATTCG 58 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 2 2 2 80 3R 25994096 25994174 TATTACATCCATAGGACACCCG 59 25994037 25994059 AGGATTCCAGTGACCATATAGAG 59 NA Drosophila melanogaster 61 CG42487 FBgn0259990 FBtr0300439 3 1 1 103 3R 23784738 23784814 TTACAAACAGCACAGCCCT 59 23784653 23784671 CAAACGATTTGGTCTGCCC 59 NA Nonspecific Drosophila melanogaster 61 CG6051 FBgn0039492 FBtr0113297 1 1 1 175 3R 22954288 22954369 CAGAATCAGGACAAAGTGCTG 59 22954133 22954151 TTCATAATCGAGGAGCCCG 59 NA Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 2 1 1 63 3R 22825493 22825576 TAGGACGGATGTATTACGAAGTG 59 22825599 22825617 AAAGATGGACGCATCAGAC 57 NA DesignNoJunction Drosophila melanogaster 61 TwdlO FBgn0039438 FBtr0085054 2 1 1 60 3R 22452359 22452377 GCCCAGTACAACTACGGAG 59 22452317 22452338 AGTAACTGGGAACATTATCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31323 FBgn0051323 FBtr0084988 2 1 1 96 3R 22009675 22009773 TCATTCGAAGTGGCTACTG 57 22009830 22009851 GTTGAGTAGTTGTTGTGAAAGG 57 NA Drosophila melanogaster 61 atl FBgn0039213 FBtr0084656,FBtr0084657 1 2 2 80 3R 20459155 20459173 ATATAGCGGAGAGCTCAGC 58 20459216 20459293 ATGGGTCGCATGAATTTCTC 58 NA Drosophila melanogaster 61 CG13605 FBgn0039150 FBtr0300705 2 1 1 89 3R 19936539 19936558 TCAAACTGCTGACAATGCTG 59 19936255 19936487 ACACATAAAGCCTAGCCCG 59 NA Drosophila melanogaster 61 Hmgcr FBgn0001205 FBtr0084451,FBtr0084450,FBtr0301343 2 3 3 80 3R 19574386 19574470 GCCGACATTATCATCAAATGG 57 19574510 19574530 TTTAACTACCAAGGCGATGAG 58 NA Drosophila melanogaster 61 sec13 FBgn0024509 FBtr0084409 2 1 1 81 3R 19182667 19183133 ACTAAGCTCTACGAATACAGCA 59 19183175 19183193 CCAACACCAATCCGTACTC 58 NA Drosophila melanogaster 61 CG4721 FBgn0039024 FBtr0084317 2 1 1 60 3R 18591714 18591736 CCAACTATTCGATAGACATCCTG 58 18591676 18591697 CCCATATAGGCTTTGATGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33721 FBgn0053721 FBtr0091718 3 1 1 80 3R 18157292 18157374 AATGTCCCTATGATCACGACC 59 18157413 18157434 GTGGAAGGATGTTGGTAAAGTG 59 NA Drosophila melanogaster 61 CG15498 FBgn0038892 FBtr0084122 2 1 1 104 3R 17394130 17394148 CCAAGAGGCTGAACCTCTC 59 17393986 17394063 GGCCACAATTCTTATGGGAC 59 NA Drosophila melanogaster 61 CG5316 FBgn0038704 FBtr0083759,FBtr0083760,FBtr0083758 1 3 3 80 3R 15229531 15229621 CCAGCATCTTTCACTTGAACC 59 15229663 15229681 TCACTTCCACAACGTTCCT 59 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0112924,FBtr0100317,FBtr0089767 2 4 4 87 3R 14810830 14834236 CACAGTTCCTGAAAGCGAC 59 14834287 14834305 TGTAAAGAGCTCCTGCTGG 59 NA Drosophila melanogaster 61 CG7678 FBgn0038613 FBtr0083658 1 1 1 137 3R 14215159 14215297 GTTCCGTGATTTGAATGCGA 59 14215041 14215059 AGATCGAGCACCTTGTGAC 59 NA Drosophila melanogaster 61 CG17803 FBgn0038547 FBtr0083528 3 1 1 80 3R 13626492 13626512 TCAGGATCTATATGACAGGGT 57 13626232 13626451 ACTCCTTGTTGTATCCACAC 57 NA Drosophila melanogaster 61 CG8925 FBgn0038404 FBtr0083253,FBtr0113241 3 2 2 84 3R 12003589 12003607 CTCAGCGGATGGATATCGG 59 12003652 12004127 AAATTCCACCAAATACGCTCTG 59 NA Drosophila melanogaster 61 alpha-Man-IIb FBgn0026616 FBtr0083179 1 1 1 139 3R 11645133 11645210 AGTTTGACTTTCAGCCGGA 59 11645313 11645331 AGGATCGTTATGGGAGTGC 59 NA Drosophila melanogaster 61 Aats-ser FBgn0021750 FBtr0083086 2 1 1 60 3R 11166913 11166932 AGTTCTCTGAATTAGCCCGT 58 11166952 11166973 GTGTAGTTACCCAAGTGATCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6623 FBgn0038303 FBtr0083138 2 1 1 81 3R 11041107 11041126 ACACGGATCTCATGTACGAG 59 11040797 11041063 TTCATGGATACGACACCCG 59 NA Drosophila melanogaster 61 CG33977 FBgn0053977 FBtr0100020 2 1 1 164 3R 9228614 9228632 CAAACGCCACTAACTACCA 57 9228400 9228418 AGCCTCCTGAATTTCATCC 57 NA DesignNoJunction Drosophila melanogaster 61 Sfp87B FBgn0259975 FBtr0300319 3 1 1 60 3R 8099078 8099099 AGTGCAACGCTATATCTATGGT 59 8099116 8099138 GTATTTGTAGTACGTAGGAACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12594 FBgn0037941 FBtr0082429 3 1 1 80 3R 7556029 7556110 TCACATTAAGGGCTAAGAACGA 59 7556148 7556169 CCAGATAAAGATTGTGAGTGGC 59 NA Drosophila melanogaster 61 CG18577 FBgn0037870 FBtr0082341 2 1 1 77 3R 7022049 7022067 GAAAGGCTATCGGAGTTGC 58 7022492 7022510 GAGATGTTGATGGGTTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 fau FBgn0020439 FBtr0082306 3 1 4 80 3R 6602945 6602963 AAAGTGGATTTACGACCCG 57 6600772 6602901 GTGTTCTCTTCGTTCTCGT 57 NA Drosophila melanogaster 61 CG11722 FBgn0037777 FBtr0082205 1 1 1 93 3R 5870914 5870932 CAAGTTCGTGGACAAGCTC 59 5870773 5870859 TCGCTTGATAAATCGATCCTG 58 NA Drosophila melanogaster 61 CG8526 FBgn0037759 FBtr0082142 1 1 1 84 3R 5627499 5627517 GATTGAGTTCTGCCCACTG 58 5627564 5627644 GTATGTCTTTCCCACTTCGT 57 NA Drosophila melanogaster 61 CG8507 FBgn0037756 FBtr0082140 1 1 1 80 3R 5617769 5617852 CTTAAGCCCTACAAGAAATTCC 57 5617893 5617911 TCGGTTGAGTTTCTTGTCC 57 NA Drosophila melanogaster 61 Os-C FBgn0010401 FBtr0300320,FBtr0300321 2 2 2 60 3R 3804742 3804760 CTGGTGATGCTTCAGATGG 58 3804783 3804854 CAACTGTGATCACATCCTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9772 FBgn0037236 FBtr0078954,FBtr0078952,FBtr0111207,FBtr0078953 1 4 4 88 3R 161660 161741 GTTTGACTCGCATGTTGCA 59 161590 161611 CTGTTGGTGTTAGACTATTGCA 58 NA Drosophila melanogaster 61 CG14645 FBgn0040687 FBtr0078908 2 1 1 60 3R 161039 161060 AACAGGATTCATGGATAGTCTC 57 161081 161099 TTTCTCCCATTCCCATTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-110 FBgn0083057 FBtr0113600 3 1 1 60 3L 831923 831942 AAATCGTGATCACTGAACCA 57 831882 831901 CAAATCAGTGAAGTGTGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32459 FBgn0052459 FBtr0078578 2 1 1 80 3L 22848834 22848907 GGGTCTTCTAGTAGAGAAGGG 58 22848774 22848793 TCCGGATAGTCTGTAAGGTC 58 NA Drosophila melanogaster 61 CG32459 FBgn0052459 FBtr0078578 1 1 1 80 3L 22848835 22848909 CTGGGTCTTCTAGTAGAGAAGG 58 22848776 22848796 CGGATAGTCTGTAAGGTCCTC 59 NA Drosophila melanogaster 61 CG10586 FBgn0037036 FBtr0078335 1 1 1 92 3L 20949100 20949233 GGAATCAGTCTCCATATCGGA 58 20949028 20949046 TAAACCAAGGGACCTCCTG 58 NA Drosophila melanogaster 61 CG10589 FBgn0037035 FBtr0078266 3 1 1 60 3L 20921844 20921862 ATAAGGATGCATGTCCCAG 57 20921885 20921904 CAGGATAGACAAGATAGCCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kni FBgn0001320 FBtr0078283 2 1 1 83 3L 20687418 20687436 ACCAGACATGCAAAGTGTG 58 20687138 20687371 CAAAGAAGGACTTGCAGCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5976 FBgn0036999 FBtr0078199 3 1 2 80 3L 20467726 20468670 CTGGTGGATATTCCTAAGATATCC 58 20468707 20468727 ATCGGATAGATTGCTGTACTC 57 NA Drosophila melanogaster 61 CG6289 FBgn0036970 FBtr0078172 1 1 1 80 3L 20336882 20336903 CTGATGTAGAAGTCAAGCTTCC 58 20336942 20337019 TTAGTCCAGCCTCATATACGG 58 NA Drosophila melanogaster 61 CG32177 FBgn0052177 FBtr0075210 2 1 1 255 3L 17647277 17647298 AAATTGCGTATAGTGAAGCCAC 59 17642298 17642316 GGTCCCAACTGATCATCCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Or74a FBgn0036709 FBtr0075247 1 1 1 80 3L 17321266 17321396 AAGGCATTTACGAATCCCTG 58 17321205 17321223 TCCTAGTGCCAGTAACTCC 58 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 1 4 4 65 3L 16346788 16346806 ATCATCAACTTCACCCGGT 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13054 FBgn0036584 FBtr0075481 2 1 1 60 3L 16249512 16249530 GCATCTCAGCCGAATTTCC 59 16249470 16249488 ACTGGAGAAGTGATGCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10688 FBgn0036300 FBtr0075961 3 1 1 60 3L 12528447 12528465 TCGAACCATCAGCCATAGG 59 12528489 12528507 AATCTCGGTGAGAATGCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Adk1 FBgn0022709 FBtr0076018,FBtr0076017 2 2 2 64 3L 12193846 12193864 TCAAGCAGAACACCAATGC 59 12193727 12193818 CTCGGCATTGATCGTAAGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11588 FBgn0036221 FBtr0076038 1 1 1 60 3L 11915366 11915388 GACAACTACGGAGAATATGATGG 58 11915408 11915426 ACTACTTTCGGTTGGTCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr67Fa2 FBgn0036109 FBtr0076192 2 1 1 75 3L 10884867 10885123 TATGTTCCGCTACATGCTC 57 10885162 10885180 AGCTTCCTGGTTGTAGGTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076546,FBtr0112792 1 2 6 95 3L 9044291 9044309 AAGGAGAAGGTGATCGAGG 58 9043444 9044232 CATGGTGTCTTGTTTGCCA 59 NA InUTR Drosophila melanogaster 61 Jon66Cii FBgn0035887 FBtr0076666 2 1 1 68 3L 8386463 8386481 CTGTCTACTTCGGAGCCAC 59 8386413 8386432 TAAAGTTACCGTTGCCAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MED24 FBgn0035851 FBtr0076694 1 1 1 80 3L 8186313 8186334 AGATGTATACAATCTGGCTGAC 57 8186374 8186451 AGGTAGTTAAGAACCAACGG 57 NA Drosophila melanogaster 61 CG13681 FBgn0035832 FBtr0076679 3 1 1 62 3L 8064934 8064952 AATCTCACCACGCTGAGAG 59 8064975 8064996 TTCCAGGCGCATATTTATTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rac2 FBgn0014011 FBtr0076867 3 1 1 60 3L 7427146 7427164 AGCTGCGGTCAAGTATCTG 59 7427104 7427122 GAAGACCGTCTTCAGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mei-P22 FBgn0016036 FBtr0076836 2 1 1 60 3L 7237925 7237943 AAGCATTCAATGCACTCCC 58 7237967 7237985 CAGTTTCTTAGCCGGTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17744 FBgn0035730 FBtr0076932 2 1 1 108 3L 7019528 7019617 GCCTTCACAGATATGAATGGTC 59 7019441 7019461 CAACGGAATAGGCATAATCGA 58 NA Drosophila melanogaster 61 Lcp65Ac FBgn0020642 FBtr0076991 1 1 1 110 3L 6138131 6138220 AACTTTGCTTTGGAGACCAG 58 6138293 6138311 CACGAAGGAGTAGGATCCG 59 NA Nonspecific Drosophila melanogaster 61 CG32406 FBgn0052406 FBtr0077037 1 1 1 80 3L 6013196 6013215 CTCCGATGAGGATAATTCGC 58 6013258 6017744 GTCAAGCGTTTGACCAGAG 59 NA Drosophila melanogaster 61 CG5150 FBgn0035620 FBtr0077086 2 1 1 60 3L 5589839 5589857 AGACCCTCATTGTGGTGAC 59 5589881 5589899 GGTTGATATCCCGAAACGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32236 FBgn0046793 FBtr0073369 1 1 1 60 3L 4666222 4666243 GCTATACCATCAGCTTTAAGCA 58 4666183 4666201 ACTCGTCCAAAGATGACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267,FBtr0073265,FBtr0073268,FBtr0113135,FBtr0073269,FBtr0073266 2 6 6 112 3L 4126918 4126997 CTCTCGAGGAGATTAACAAACTC 58 4126828 4126846 GGTGGACATAAGGTTTGCA 58 NA Drosophila melanogaster 61 Acp62F FBgn0020509 FBtr0072943 3 1 1 60 3L 2739860 2739879 CCTAAAGTTGACTGTACGGC 59 2739901 2739920 TTTCAGGACATGCTACAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8960 FBgn0035315 FBtr0072872 3 1 2 160 3L 2197472 2197490 AATCGTCGTCCGTTGAGAG 59 2197675 2197693 GCAACTTGACCTCCTTCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 JTBR FBgn0025820 FBtr0072788 3 1 1 60 3L 1802521 1802539 GGCGGAATGAGAAGTACAC 58 1802479 1802499 ACTATATCGAATTCGGAGCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3402 FBgn0035148 FBtr0072559 1 1 1 81 3L 652263 652451 CGGATTATGGCATCTATGTGAC 59 652203 652221 AGGATCTTGTCGTGGATCC 58 NA Drosophila melanogaster 61 CG9380 FBgn0035094 FBtr0110899 1 1 2 82 2R 21072173 21072241 CTTCACACTCTTGGCATCC 58 21072109 21072128 TTCAAGCAAGTCCTCAACTC 58 NA Drosophila melanogaster 61 CG2811 FBgn0035082 FBtr0072412 1 1 1 80 2R 20827640 20827661 ACATACTAGAAGACTACCCGGA 59 20827523 20827602 AGCACTGAATGGTTTCATTCTG 59 NA Drosophila melanogaster 61 Cdk9 FBgn0019949 FBtr0071937 1 1 1 88 2R 18524508 18524526 ACGTCAAGTTCAGTCTGGG 59 18524370 18524456 GTGCAGGATCTTGTTGCTG 59 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 3 3 3 81 2R 17059013 17059033 CGGTAAATGTTACGGACTCAC 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 CG34201 FBgn0085230 FBtr0112394 3 1 1 63 2R 16638499 16638584 CAGCTTAGAAACAGCACCA 58 16638609 16638629 GTATACGCGCACATATTTCTC 57 NA DesignRelaxed Drosophila melanogaster 61 maf-S FBgn0034534 FBtr0086230 3 1 1 87 2R 16528609 16528689 AGAAAGTCATCCCTGGCAC 59 16528737 16528758 TAAGATCCCTTACCGAAATGCT 59 NA Drosophila melanogaster 61 CG8908 FBgn0034493 FBtr0086276,FBtr0086275 3 2 2 80 2R 16154354 16154372 AGGTGAAGAATCTGCCGAG 59 16154413 16154483 ACAGGAGTATCTTGGAGTTTCC 59 NA Drosophila melanogaster 61 Rep FBgn0026378 FBtr0086462 3 1 1 122 2R 15379766 15379843 TCATAGGCACAGGCTTCAC 59 15379927 15379947 CATCCATAGAGAAGGAGCTCC 59 NA Drosophila melanogaster 61 CG33453 FBgn0053453 FBtr0086564 3 1 1 89 2R 15140185 15140268 GTCCTTATGGCTTGCAAGTG 59 15140115 15140139 AATCTAGTAACACTCCATAGTCTCC 59 NA Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 2 2 2 80 2R 14865374 14865393 CGCCAATTCGCTATATTCTC 57 14865434 14865529 GGATTGAGACGGAAATATTCG 57 NA Drosophila melanogaster 61 CG30121 FBgn0050121 FBtr0086644 3 1 1 87 2R 14628764 14628782 AGCTGATAGGACAAACCGG 59 14628466 14628716 TCCATGTTTAGTGAATTTCCGG 59 NA InUTR Drosophila melanogaster 61 CG30121 FBgn0050121 FBtr0086644 2 1 1 86 2R 14628763 14628781 GCTGATAGGACAAACCGGA 59 14628466 14628716 TCCATGTTTAGTGAATTTCCGG 59 NA InUTR Drosophila melanogaster 61 CG10924 FBgn0034356 FBtr0086699 2 1 2 106 2R 14415257 14415275 GAACAGGTGACAGAATGCT 57 14420216 14420234 AATGGAGAGGAAGCGACAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5033 FBgn0028744 FBtr0089551,FBtr0089550 3 2 2 81 2R 13679635 13679718 ATGGTCTATAATGACCTGCTG 57 13679761 13679779 CAAACTCATCGCGTTTCTC 57 NA Drosophila melanogaster 61 UbcD10 FBgn0026316 FBtr0089553 2 1 1 60 2R 13676365 13676385 TACCATCCAAACATCGATGAG 58 13676325 13676346 AGTTCTCCGTACTGATAATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10931 FBgn0034274 FBtr0089545 1 1 1 60 2R 13637204 13637224 GGATATGTGAAGTTCTCACCG 58 13637246 13637264 GGGTGTTGTTCAATGTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34415 FBgn0085444 FBtr0112691 2 1 2 80 2R 12842208 12842230 CTCTAATACGTGAGGATTTGCAC 59 12842085 12842171 CATCATCGGAATGAAAGTCCTC 59 NA Drosophila melanogaster 61 CG8613 FBgn0033924 FBtr0087546 3 1 1 80 2R 10241975 10242051 GAAGAATGCATCGCAAATCG 58 10242092 10242112 GTAGCTTTGTAGTAGTCCAGC 58 NA Drosophila melanogaster 61 CG30060 FBgn0050060 FBtr0087714 3 1 1 60 2R 9310986 9311006 GTGATCAGTGTGCTATATCCC 58 9310946 9310966 TAATCACTACCATAATGCCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr49Af FBgn0033729 FBtr0087921 1 1 1 60 2R 8293620 8293699 TCATTATGAGCTCAAAGATGGC 59 8293719 8293738 ATTCACGGACTTCAAGACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34233 FBgn0085262 FBtr0112427 3 1 1 62 2R 8170376 8170394 ATGACTCTGCCAACATTCG 58 8171382 8171400 AATCCGCCATCGTAAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13220 FBgn0033608 FBtr0088116 1 1 1 60 2R 7172087 7172105 TACTACATACCGCTGCACG 59 7172128 7172147 GGTTCATAACATTCACCGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18445 FBgn0033476 FBtr0088434 3 1 1 124 2R 5927001 5927020 TTACGACTACGGATCCTACG 58 5926836 5926915 CTTTGGTGAGTTCCTCATCG 58 NA Drosophila melanogaster 61 TXBP181-like FBgn0026326 FBtr0088599 2 1 1 81 2R 5178774 5178849 AGGAGTTTCACCCAATAAGC 57 5178712 5178730 CATATTGAGGGAAGAGGCG 57 NA Drosophila melanogaster 61 PGRP-SC1b FBgn0033327 FBtr0088708 3 1 1 61 2R 4601490 4601508 CACTCACATCTGGAACGAG 58 4601532 4601551 TTCAGGAACCACTCTAACCA 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG14744 FBgn0033324 FBtr0113056 3 1 1 88 2R 4596072 4596146 TGGGAGAGGGTATAGTGCT 59 4596002 4596020 TCTGATGTAGTACCGCAGC 59 NA Drosophila melanogaster 61 Lcp1 FBgn0002531 FBtr0088763 1 1 1 120 2R 4318618 4318702 TCAAGTTTGTCATGATCTGCG 59 4318518 4318536 CGAACATCATCGGATTGGG 58 NA Drosophila melanogaster 61 CG2183 FBgn0033273 FBtr0088789 3 1 1 82 2R 4055559 4055577 CCTTTGCAAATACGGACCG 59 4055623 4055704 AGCGTTTCACCTTATCCGA 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 3 2 2 60 2R 4048433 4048554 TTCCCTGCTAACAGAAGCT 58 4048391 4048411 ACCAGCAATCAAGGTAAACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CSN4 FBgn0027054 FBtr0088859,FBtr0301230 1 2 2 96 2R 3860606 3860624 TCTGGAGGACAACGATTCG 59 3860681 3860761 ATATAGAACCTGCAACTCCTCG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 3 5 5 80 2R 3371062 3371165 ACTTTATGTGGGATATCGAGGT 58 3371003 3371021 CGCAAGTGCGATCTTTCTC 59 NA Drosophila melanogaster 61 CG30157 FBgn0050157 FBtr0086186 2 1 1 122 2R 2861884 2861902 AGAAGTACCAAGGCTTCGT 58 2861718 2861798 CTACGAAATGCGGATCCAC 58 NA Drosophila melanogaster 61 CG14471 FBgn0033049 FBtr0085970 3 1 1 60 2R 1885598 1885617 ACACCTATATCCTGATGCCC 58 1885640 1885658 TTCACTACACCTGCTTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8245 FBgn0033031 FBtr0086036 3 1 1 96 2R 1556837 1556857 TACAGCCATCTATGGTAGGGA 59 1556912 1556994 AATTGATTCCTCCACAAACCAC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-640b FBgn0083025 FBtr0113543 1 1 1 80 2L 20419040 20419058 TCGTGTCTACAATGCTCCA 59 20419102 20419120 TTGGCAACCATCTTAGGCA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cta FBgn0000384 FBtr0111126 2 1 1 110 2L 22875225 22875244 TAGTAAGGCTGCGTAGTACC 58 22875317 22883495 GCAGTTTAACCTGACGTCG 59 NA Drosophila melanogaster 61 CG11629 FBgn0032965 FBtr0085950 1 1 1 60 2L 21896965 21896986 CAGATGATGCAGAAAGCTAAGG 59 21896926 21896944 CGTCACCTGTTGAGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3305 FBgn0032949 FBtr0085896 1 1 1 106 2L 21575100 21575969 CTATGAGGCTAGGGAGGGA 59 21576034 21576057 GATGAATAAACTGAGTAGTCTGGC 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 2 5 5 90 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184210 21184286 CACGATGAACCAACTTTAACTC 58 NA Drosophila melanogaster 61 Mpp6 FBgn0032921 FBtr0081469 3 1 1 62 2L 21157382 21157400 CAAATCGGCGGAGATAGTG 58 21157424 21157444 GCGTGGTTTCTTAAAGTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9318 FBgn0032880 FBtr0081393 1 1 1 81 2L 20733974 20733992 CTTCTATCTGCCCGGACTG 59 20733002 20733931 CAACAAGATTTCCGACTTGCA 59 NA Drosophila melanogaster 61 CG17470 FBgn0032869 FBtr0081406 1 1 1 60 2L 20642570 20642588 GAGTACAAGGGCATCAAGG 57 20642528 20642546 GATAAGTGCCGACATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081232,FBtr0081230,FBtr0081229 2 3 4 89 2L 19183325 19183396 AAATCATCATGTGCTGCGG 59 19183254 19183272 GTACACAGCAGAGTTCCAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15258 FBgn0032563 FBtr0080743 1 1 1 60 2L 15361548 15361567 GAAGAAGTTCCCAGAGACAG 57 15361507 15361526 AGTTGCGGGTTATTTCACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6388 FBgn0032430 FBtr0080367 3 1 1 84 2L 12429666 12429684 TCGCAAATCGGCATTATCG 59 12429728 12429807 GTCACCAATCATAATAGTGGCTC 59 NA Drosophila melanogaster 61 Patsas FBgn0029137 FBtr0080362 1 1 1 80 2L 12101434 12101507 CACATGCACTTCGATCCTG 59 12101372 12101390 CGCAAGTAAGGATAACGCT 58 NA Drosophila melanogaster 61 CG6766 FBgn0032398 FBtr0080308 2 1 1 82 2L 12040315 12040333 AGTACGACTGCCTGATTCC 59 12040189 12040273 CAGAGTAATTGGAGACAACTCTG 59 NA Drosophila melanogaster 61 CG6746 FBgn0032394 FBtr0080313 2 1 1 60 2L 12001997 12002019 GTCAACTACTACATATTGCAGGG 59 12001959 12001978 TATACTCCCACAACGTCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6431 FBgn0032289 FBtr0273319 1 1 1 80 2L 10727745 10727845 TTCGAGATGCTTACCTATCCC 59 10727887 10727905 GGAGGTAGCATGGATAGCG 59 NA Drosophila melanogaster 61 eEF1delta FBgn0032198 FBtr0079951 3 1 2 89 2L 10232584 10232603 GGCATTGGACAAATTCTGGG 59 10232654 10233770 GTAACGCCATCGATCTTCTG 58 NA Drosophila melanogaster 61 CG3748 FBgn0032110 FBtr0079803 2 1 1 60 2L 9343764 9343784 AAGACTCCTATCCGTATCCCT 59 9343806 9343824 TCCGCACCATTGATTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32988 FBgn0052988 FBtr0079736 2 1 1 60 2L 8865063 8865081 CTGCTGTCTTCCATTTCGT 58 8865105 8865123 TTGCCTTGTAGACCCTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Snx6 FBgn0032005 FBtr0079631 1 1 1 80 2L 8218501 8218585 CTGCTTTCAAGAAGAGCCTC 59 8218440 8218461 ATTGGCGCAGATATTCATACTG 59 NA Drosophila melanogaster 61 CG8498 FBgn0031992 FBtr0079640 3 1 1 150 2L 8162226 8162319 GAATTGCAGGAATTCAACCAG 58 8162037 8162055 CCTTGAAGTCCAGAAAGCC 58 NA Drosophila melanogaster 61 CG7149 FBgn0031948 FBtr0079496 2 1 1 80 2L 7788081 7788160 TACAACTTGGATGGCATGGA 59 7788020 7788040 TCCATGATCGAATAGCTCTCC 59 NA Drosophila melanogaster 61 CG13794 FBgn0031936 FBtr0079507 2 1 1 87 2L 7721176 7721194 TGGATCATTTCCTTCGGAC 57 7720966 7721128 CAATGCCTTCATTGTAGTAGTG 57 NA Drosophila melanogaster 61 CG18585 FBgn0031929 FBtr0079516 2 1 1 81 2L 7690096 7690179 ACAAGAAGGATCGTATGTGG 57 7690034 7690052 AAGTTCCTATTGGCGTCAG 57 NA Drosophila melanogaster 61 Atac1 FBgn0031876 FBtr0079362 1 1 1 60 2L 6960038 6960056 TATGCTGGACAAACTGCGA 59 6959996 6960017 GGTCGTGGTGATGTAATTATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 3 2 2 129 2L 6067223 6067294 TACTTGAGAAGCTGGTGCC 59 6067387 6067405 TATTGACCTGCAAAGCCCT 59 NA Drosophila melanogaster 61 jet FBgn0031652 FBtr0110896 3 1 2 167 2L 4948900 4948919 CTATCTCCGACTATGGCGTG 59 4948414 4948432 GGTGATGTTGCACAGTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 2 1 1 165 2L 4408506 4408594 TATCGATGTGGTTCGATGGG 59 4408360 4408379 GATAGTTGCTGAAGATGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 Traf4 FBgn0026319 FBtr0077429,FBtr0112925 1 2 3 194 2L 4372532 4378919 AACAGATTATCTATCCCGGTCC 59 4379074 4379092 GATCGGTCATCATGATGCG 59 NA Drosophila melanogaster 61 slp2 FBgn0004567 FBtr0077500 2 1 1 60 2L 3838116 3838138 CAATTTCTTACCTATCCTCCGAC 59 3838156 3838176 TATAACGCTGATACATGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17265 FBgn0031488 FBtr0077646 1 1 1 87 2L 3014565 3014651 CGTACCAGAACAAACTACGTC 59 3014700 3014718 AAGTAGAGGCAGAGCTCCT 59 NA Drosophila melanogaster 61 CG34447 FBgn0085476 FBtr0112751 1 1 1 103 2L 2419491 2419561 CTGTACTCGAATTCCACCC 57 2419406 2419427 CCATGGATGAGTATCTTTAGGG 57 NA Drosophila melanogaster 61 ast FBgn0015905 FBtr0077952 3 1 1 86 2L 1078495 1078513 CAGTGCTCTCCTACGACTC 59 1078561 1078637 GCTTGGTGAGAACCTTAACAG 59 NA Drosophila melanogaster 61 GluRIIC FBgn0046113 FBtr0273244 1 1 1 80 2L 915740 915822 TCATGAAAGGGACTTCCGG 59 915866 915884 TTATCCGCTGTCCATCCTC 59 NA Drosophila melanogaster 61 rempA FBgn0260933 FBtr0078078,FBtr0078077 1 2 2 80 2L 555563 555581 TATATTGAGAGCTCCGGCG 59 555438 555521 TATCTTTACCTGCGAGAACCA 59 NA Drosophila melanogaster 61 CG11885 FBgn0031253 FBtr0078089 1 1 1 60 2L 421314 421332 GATTCGACAGGCAGTTCTC 58 421272 421291 CAGTGGAACACTATCTCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33992 FBgn0045202 FBtr0100045 1 1 1 60 2L 328014 328036 GGAGAAAGGCATGAATAAGAAGG 59 327976 327997 ATCCTCATCCTTATCTTTCGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 galectin FBgn0031213 FBtr0301733 1 1 3 168 2L 74558 74906 GGAGGTTTGAATGAGGCCT 59 75091 75115 CTCGAGAGTCATTGTTATAAACCAG 59 NA Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0078002,FBtr0078001 2 2 3 87 2L 759540 759690 TGGGCAAGAAACGATATTATCG 59 759738 759756 GATCATCGACCACGAATCG 58 NA Drosophila melanogaster 61 Pino FBgn0016926 FBtr0077987 3 1 2 101 2L 1117507 1128138 AACTTCATAGTGCCATCAGC 58 1116672 1116690 CAGACCGAGATTGTGATGC 58 NA Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 1 1 1 72 2L 2652123 2652141 TCCGTTTGCAATGGAAAGC 59 2652009 2652027 ATGACATCACACTCTCCGT 58 NA DesignNoJunction Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0089750 1 2 4 150 2L 2740777 2741118 CCATCAAGGACACCATGAC 58 2741232 2741250 TTGGTGAAGGTGAACTCCA 58 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 2 4 4 60 2L 2768915 2768934 AAATCAGTACTGCCTCAACG 58 2768874 2768892 AGAATCCAGTAGGCCATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Syt1 FBgn0004242 FBtr0077726 2 1 4 80 2L 2793375 2793394 TGGAAAGGGTAAGAAGGGTG 59 2793257 2793335 ATATCAGGCTGAACTTTCTCCT 59 NA Drosophila melanogaster 61 pgant4 FBgn0051956 FBtr0114524,FBtr0077523 2 2 2 84 2L 3473692 3473775 CAACTACAATTGGCTGCCT 58 3473821 3473841 CGAAATAGTATCCACCATGGG 58 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089304,FBtr0089312,FBtr0089310,FBtr0089305 3 4 11 180 2L 3626210 3634251 TATGTCATGGAAGATGGACG 57 3626049 3626067 TGATGGTCTGAAAGCACTG 57 NA Drosophila melanogaster 61 bowl FBgn0004893 FBtr0077492,FBtr0077490,FBtr0077493,FBtr0077491 2 4 4 81 2L 3780571 3781917 GGATCACAGGTATATTCACTCCA 59 3781958 3781976 CAAGGTTCTCGATTGGCAG 58 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 2 4 9 80 2L 3884509 3886993 AATGAATCAGGAGTCACAGG 57 3884448 3884466 AACAGTTGATTGCGTTTCC 57 NA Drosophila melanogaster 61 Atet FBgn0020762 FBtr0077427,FBtr0112899,FBtr0112898,FBtr0077426 2 4 4 80 2L 4343684 4343763 CCATTCTGACCTTTCCCAC 58 4343806 4343825 AGTAGAAGGCCTTCAAGGAG 58 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077432 1 1 2 83 2L 4395106 4395127 GGATAACCTTACTGTTTGCCTC 59 4395171 4395246 TTGGTGACCAGCAGATAGC 59 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0079042,FBtr0301539,FBtr0301541,FBtr0079041,FBtr0301540,FBtr0079043,FBtr0079038,FBtr0079040,FBtr0079039,FBtr0079044,FBtr0301538 1 11 11 80 2L 4994830 4994852 CGCCTTCAGAATCTACAAATCTG 59 4994702 4994793 AGCTCCAGGTAATCCTTAAAGG 59 NA Drosophila melanogaster 61 CG31919 FBgn0031674 FBtr0301903,FBtr0079007,FBtr0301904,FBtr0079006,FBtr0100270,FBtr0079008 3 6 6 87 2L 5047198 5047285 GGAATGCAGCTATCTATAACGA 58 5047333 5047351 GTATAGTCGCAGTCATCGC 58 NA Nonspecific Drosophila melanogaster 61 CG9121 FBgn0031675 FBtr0301206,FBtr0079032 3 2 2 200 2L 5048823 5048841 AGCTCAGATCGAATTGCAC 58 5048570 5048588 GACTCCGACGAATCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 1 5 8 92 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 fusl FBgn0031702 FBtr0079078,FBtr0079079 2 2 2 93 2L 5331187 5331271 TGTATCCAGATAACAAGCTGCT 59 5331115 5331133 ACCAGGATGGAATTGGAGC 59 NA Drosophila melanogaster 61 CG14011 FBgn0031722 FBtr0079118 1 1 3 91 2L 5580899 5580973 ACAAGAAGGAAAGAAGAGCA 57 5580827 5580847 GTCATGCAGAATAGTTCATGG 57 NA InUTR Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 2 3 3 102 2L 6616059 6616077 CAAAGACGATAAGCGAGCC 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 milt FBgn0022201 FBtr0079397,FBtr0079399,FBtr0079398 3 3 3 122 2L 7051532 7051550 AAACCGATCTCAAGGCCTC 59 7051635 7051768 TGGGAGTGTCAGTATCTGTG 58 NA Drosophila melanogaster 61 Pvf3 FBgn0085407 FBtr0112612,FBtr0112611,FBtr0301525 2 3 3 95 2L 7100547 7107150 GCACTTCTTCGTGAAGAGC 59 7100470 7100488 TAGGTCGATCGTTCGATGC 59 NA Drosophila melanogaster 61 CG6441 FBgn0031920 FBtr0079451,FBtr0301125 1 2 2 87 2L 7475794 7475812 CAACGGTTGTGAACTGACC 59 7475858 7475941 GTCTTCGTATCTGTAAAGCTTTCC 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 2 2 3 128 2L 7805160 7805178 GTCAGGATGACACAAACGG 58 7804906 7805068 TTCCTGTTCGCTATTGCTG 58 NA Drosophila melanogaster 61 CG7231 FBgn0031968 FBtr0300184,FBtr0079531 1 2 3 81 2L 7986007 7986025 AAGCTCGACTTCAAGTCGA 59 7986070 7986151 GATACGTGGTAGGGTTCGG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0079618,FBtr0112836,FBtr0079615,FBtr0079617,FBtr0112835 1 6 6 80 2L 8261678 8261754 GCTGCATACCAAAGTTCCA 58 8261616 8261637 TCACTCAAATAATACTCGCAGC 59 NA Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301170 2 1 2 82 2L 8317678 8317700 CCATCACATTTATCAGGCTATCC 59 8317339 8317636 TCTCGTCCGTGTACATCTG 58 NA Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301170 3 1 2 82 2L 8317684 8317707 CCTCATACCATCACATTTATCAGG 59 8317346 8317646 CGTGTACATCTGCAGATAACAG 59 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 3 2 2 82 2L 8978779 8978870 CCAGAATATGCGGATAAACTG 57 8978717 8978737 AGAGATATGATGTGCATACCC 57 NA Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 2 2 2 91 2L 9059847 9060725 TACCTAAACGTTGTCGTTCC 58 9059775 9059793 CATCTCAGCGAAATGTTGG 57 NA Drosophila melanogaster 61 CG32982 FBgn0052982 FBtr0301040 2 1 4 187 2L 9135376 9148764 CCCGATATGGTGAGTTGCA 59 9156505 9156524 AAGTAGTCACGAGTGAGCAC 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 1 4 5 86 2L 9272530 9272551 CGCATTAAAGAAGCAAATCGAG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 CG31874 FBgn0051874 FBtr0079964 1 1 1 60 2L 10191239 10191257 AGTTGAGGAACGAATGCCA 59 10191143 10191163 AGCTGATTTCTTCACTATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 3 2 2 80 2L 10225140 10225287 CTATTCCAGCATGTTCGGG 58 10225078 10225096 GCTTTCGCTACCAGTTCAC 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 3 2 4 89 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264880 10264956 ATTGAATTAACGACGCGCTC 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089738,FBtr0089737 1 2 4 80 2L 10264878 10264958 TGGAGCGCTTAATTCAATGG 59 10264999 10265019 CGAGTTCCTGAAGTAACTGGT 59 NA Drosophila melanogaster 61 CG4995 FBgn0032219 FBtr0079989,FBtr0079991,FBtr0079990 3 3 3 85 2L 10324300 10324388 GATATTCCAGGCTTTGCCAG 59 10324436 10324454 ATTAGAGTGTACGCAACGC 58 NA Drosophila melanogaster 61 SamDC FBgn0019932 FBtr0079994,FBtr0079995 2 2 2 82 2L 10339550 10339571 TGAGAAACTCCTTGAGATTTGG 58 10339613 10340165 TTTCCCAATCAGATCTGCTG 58 NA Drosophila melanogaster 61 CG5096 FBgn0032235 FBtr0080006,FBtr0113034 2 2 2 80 2L 10383735 10383754 AATATGCGACGAACTTGACC 58 10383795 10383880 AAGGTGGAAATACATTGTCGC 59 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 1 4 4 80 2L 10415339 10415357 ATGCCAGTGGACAAATCAC 58 10415400 10415480 GCTGAAGGTACTTTAAGGCA 57 NA Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 2 3 3 80 2L 10848457 10848551 CAGTCTGGAAACAAGAACGG 59 10848396 10848417 ATCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 2 2 2 81 2L 11092420 11092440 TGATGTATGTAATCCTCGCAG 57 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 rab3-GAP FBgn0027505 FBtr0080301 3 1 2 143 2L 12063016 12063090 CTCGGACATGATGACAACTG 58 12062892 12062910 AAGAACGTAGGTGTTGCCA 59 NA Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 2 2 2 146 2L 12093779 12093800 CCACTGATTGATTCAGTCAGTC 59 12093907 12094008 AATCCTGGAGAGCACTGTC 59 NA InUTR Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0110957 1 1 4 128 2L 12389663 12393403 TCTGCCAGGACTAAATTTCCA 59 12393493 12393511 AGTGGGTTAGATGCTGCTG 59 NA Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 3 1 1 102 2L 12356552 12356570 GATGTGGTTGTCTTCGGGA 59 12356689 12356707 AACAGGTCTCCATGTACGT 58 NA DesignNoJunction Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 3 2 17 114 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727110 12729197 AAGTACGAGGTAACTTGGCC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 1 2 17 136 2L 12727106 12729938 ATTTGGCCAAGTGCTATCC 58 12730038 12730056 ATGGCGTTGTATCGAACAG 58 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 3 2 2 80 2L 14364280 14364380 TGACTTTAAGAAAGAGGAGTGC 58 14364419 14364439 ACAGAGCGAATATAAGTGCTC 58 NA Drosophila melanogaster 61 Adh FBgn0000055 FBtr0100594 3 1 5 188 2L 14616259 14616279 ACTGGAAACCAACAACTAACG 59 14616428 14616512 TCACCAGGTTCTTCAGATCG 59 NA InUTR Drosophila melanogaster 61 CG42586 FBgn0260954 FBtr0301740,FBtr0301741 2 2 2 60 2L 14741600 14741619 GTGGATTTGGTGATCAGCAG 59 14741559 14741577 AATCCACCTCCGAATCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 1 4 5 106 2L 15730831 15737640 CGATTCAAACGAGGACCCT 59 15730743 15730761 CAACCGATGACAGATTGCC 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003 3 1 4 104 2L 16185532 16185550 GAGAGCATATCCATGCGAC 58 16185614 16189034 GGTGCGTAGATCATAGTTAATGG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 3 7 7 111 2L 16467745 16468061 ACTATTCCGAATCCCTGGC 59 16467652 16467670 TTGTAGTATGCCGTCGGTC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878 1 1 7 80 2L 16475402 16481533 ACCAGAAAGTTCCAGACCG 59 16475340 16475358 TGCTGCGATAGATGAGTGG 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0080876,FBtr0080879,FBtr0100399 1 4 7 165 2L 16483941 16483959 CTAAAGCGCCTTGACATCG 59 16481538 16483812 TGATCGATAGGCATCTGGC 59 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080896,FBtr0080904,FBtr0080899,FBtr0080900 3 10 16 118 2L 16779837 16780560 AACACAAAGGTGTTCTTCCG 59 16780641 16780659 TTACGGGACAGGTAACCAC 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 2 7 10 80 2L 17408811 17408896 GGTGATGAAGTGGAGTCAC 57 17408937 17408958 CTGCATGTCAGCAATAATTGAG 58 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 2 4 12 90 2L 17717898 17717917 TTCAATCCCAACGATCTGGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 ninaD FBgn0002939 FBtr0081031 3 1 2 83 2L 18083180 18083262 AGAACTTAGGTTGGCACTG 57 18083309 18083327 GCTATAAGAATGCAGCCCA 57 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0300675,FBtr0300676 2 2 4 156 2L 18474947 18475164 TGCAGGATAGGATGAATTCCA 59 18474491 18474509 TTACCGTTTCCATTGGCAG 58 NA Drosophila melanogaster 61 Irk3 FBgn0032706 FBtr0114486,FBtr0081125 3 2 2 84 2L 18712240 18712258 CGTGATCTATGCCAAGACC 58 18712096 18712192 GTCGCGATAACAGATCACC 58 NA Drosophila melanogaster 61 CG17567 FBgn0040994 FBtr0081231,FBtr0081232,FBtr0081230,FBtr0081229 2 4 4 126 2L 19183415 19183434 ATTAGGATACCCTGAACGCT 58 19183255 19183273 TACACAGCAGAGTTCCACG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 spi FBgn0005672 FBtr0081268 1 1 7 60 2L 19577189 19577209 ACAAACGAAGAGCTAAATCCC 58 19571731 19571752 GCTCTTCTCGTTTCTGTATGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 fbp FBgn0032820 FBtr0081321,FBtr0081322 1 2 2 80 2L 19762535 19762558 CATCCTATACCACATGTCTAATGG 58 19762296 19762497 TGTATTTGCCCTGTTTCTCC 58 NA Drosophila melanogaster 61 Gr39a FBgn0041244 FBtr0081510 3 1 4 83 2L 21295436 21295456 GCAGGAATGATGTACAGAAGG 58 21297327 21297345 TTCTATCCAACCCAGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897 1 1 2 80 2L 21640998 21641077 CTATTGTCCATTGCAGCTCTG 59 21641116 21641137 TTCGAAATCATCCTCTAGAGCA 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0085918,FBtr0085915 1 2 5 117 2L 21670616 21670636 GAACTTACACCCGTTAAACAG 57 21670466 21670537 CTATTAACGATCGCACCGT 57 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 3 3 3 110 2L 22473765 22473783 GCATGATCACTGAAGACCA 57 22473856 22476863 GCTTTACAATCTCGTTTCGC 58 NA Drosophila melanogaster 61 CG40005 FBgn0058005 FBtr0111236,FBtr0111235 1 2 2 80 2L 22842664 22842684 AGGACATATTACATTGCCGGA 59 22842549 22842625 CGAACACAAATGGAATGTTCTG 58 NA Nonspecific Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 3 6 6 90 2R 644086 644172 TCTATTGGTCGATCAAAGGAG 57 644224 644242 CATTCTCTGAGGCTGACAG 57 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089753 2 1 6 138 2R 1009145 1009286 CATGTCTATGTATAAGGGTGGT 57 1009028 1009046 AAGACGTTCAAACTCCCTC 57 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0086040 1 1 6 80 2R 1590895 1590981 ACATAAACAAGTCACCGACAC 58 1591023 1591041 TGTTGTTAGGCTCGATGGG 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 2 4 4 83 2R 1925631 1925650 GAGATGGGCTTCAAACTCTC 58 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 CG14591 FBgn0033054 FBtr0302827,FBtr0086026,FBtr0302828,FBtr0086025 1 4 4 82 2R 1925630 1925649 AGATGGGCTTCAAACTCTCC 59 1925507 1925588 AAGATAAATCTGCAGGCATGAC 59 NA Drosophila melanogaster 61 CG7845 FBgn0033059 FBtr0302508,FBtr0086023 3 2 2 86 2R 1962622 1962640 AAATAAGAGCGTCAACGCA 58 1962491 1962572 TCATTATCGCTGTCACCCA 58 NA Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 1 2 2 80 2R 2558899 2559028 TGGACAAGTTCTACTGGTACG 59 2558839 2558860 CCAGCAGTGAATAGATAAAGCC 59 NA Drosophila melanogaster 61 koi FBgn0033107 FBtr0086159 3 1 1 60 2R 2704053 2704071 CCGGATTTCTAGGCAAGTC 58 2704148 2704167 TCTAGGGTGAATCCAGTGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG3358 FBgn0033117 FBtr0086166,FBtr0114532 1 2 2 80 2R 2811097 2811115 GAAAGTCATCGTTACCGCC 59 2811159 2811397 GTGTAGATGCGCTCATCCT 59 NA Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 2 3 6 86 2R 2814318 2814906 CACATCATCCAAACTATGCCA 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111070,FBtr0111065 3 2 59 81 2R 3225660 3235367 AGTGCAAGTCATGGTTCCA 59 3225597 3225615 GACCGAAACAGAGTCCTCC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111066 3 1 59 83 2R 3219878 3225768 CCTTATTGTCAATGTACCTCCC 58 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111050,FBtr0111096 2 2 59 80 2R 3219877 3227670 AATTGTGAACGTACCTCCCA 59 3219816 3219834 CATTCAACCTTGGCATCGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111093,FBtr0111073 1 2 59 92 2R 3236476 3245111 CAATGCCGTTCTTTAGATGGT 59 3236404 3236422 TACCAGAGACCTGCTTCAC 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 1 5 8 107 2R 3355321 3356622 CTATGCCGTTGATGTGCTG 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0088939 3 1 5 139 2R 3575794 3582608 AGAATCGCGACAAAGAAAGC 59 3574433 3574451 CAAATAGACCCTCACGGGA 58 NA Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 3 2 2 85 2R 3846784 3846863 TCAAGCATAGAGTGTTGACCT 59 3846719 3846737 AGAGGCATCAATGCTTTCC 58 NA Drosophila melanogaster 61 lig FBgn0020279 FBtr0100575,FBtr0301916,FBtr0088775,FBtr0301917,FBtr0301915,FBtr0088776,FBtr0088774 3 7 7 80 2R 3961943 3961964 TATCAGCAACCAGTGTATTCCT 59 3962003 3962995 CAGATCGTAATATCCCTGCAC 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088577,FBtr0302506,FBtr0088576,FBtr0088570,FBtr0302505,FBtr0088571,FBtr0088575,FBtr0088572,FBtr0088574,FBtr0088573,FBtr0088578,FBtr0302507 2 12 12 80 2R 5005651 5005727 CGCGAGGCTTAATCAAAGAG 59 5005768 5005788 AGTTAAGGGAAACCTTCAGCA 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 1 3 12 156 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006543 5007266 CATTACCACCGGATTGCTG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0301511,FBtr0088603 1 3 10 105 2R 5143203 5146353 GATCAGGAGGTTATACCACAG 57 5143118 5143136 TAGTAGGAGTAGCTGGCTC 57 NA Drosophila melanogaster 61 Camta FBgn0259234 FBtr0301766 2 1 5 95 2R 5360663 5360753 TCTCTGAGGATAGCCACAC 58 5360812 5360830 TTTGGTTCAGGGATAGCGA 58 NA Drosophila melanogaster 61 brp FBgn0259246 FBtr0300245,FBtr0299915,FBtr0300542,FBtr0299916 1 4 5 110 2R 5423496 5423514 GAGTTGGAGAAGGTCAGGG 59 5423586 5423665 GTTGGACATCTTGCTCTTCTC 59 NA Drosophila melanogaster 61 CG1513 FBgn0033463 FBtr0302176,FBtr0088450 2 2 2 81 2R 5772637 5772717 CACCATCCGCCAATTTCTG 59 5772574 5772593 TCGACTTGGTCCATACATGG 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0112902 2 1 5 80 2R 5885052 5885222 CGTCAAGCTAGCATTCCTG 58 5884990 5885009 CTAATGCTACGCTGAATGCC 59 NA Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 3 3 3 80 2R 5919620 5919729 TACCAGATCAATGGAGGATACC 58 5919561 5919579 GAATGCGTTTCTGGGTGTC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993534 5993553 TCTGGCCCTTAACTTCTCAG 59 5993601 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 2 3 4 106 2R 6034472 6034493 GTGCTTAACTCATATCAGTTGG 57 6034320 6034408 CTATGAAGGCTTAACGTAACAC 57 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299826,FBtr0301965,FBtr0299825,FBtr0088342,FBtr0088347,FBtr0301131,FBtr0299828,FBtr0088341,FBtr0088344,FBtr0088345,FBtr0088338,FBtr0088340,FBtr0088343,FBtr0088339,FBtr0299829,FBtr0088346 3 16 17 82 2R 6192600 6192989 ATGTTGAGATTGTCAGTCGAG 58 6193033 6193051 GAAGTTGTATTTGGCACGG 57 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 1 9 9 81 2R 6348881 6348902 CAAGAAGGATTTGTTCGAGGAG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 3 3 3 94 2R 6527873 6527891 GTCCTTGGATGACCTGGAG 59 6527947 6528031 ACTGTCGATGATGTTCTTCGT 59 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 2 5 5 106 2R 6624407 6624428 AAACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 shn FBgn0003396 FBtr0088099,FBtr0088100,FBtr0088101,FBtr0088098 1 4 4 80 2R 7101695 7101780 GAAAGTAGTGATACGGATGAGTC 58 7101817 7101838 CGTCATTGATAACGAGAGTAGG 58 NA Drosophila melanogaster 61 CG9005 FBgn0033638 FBtr0300945,FBtr0088089 3 2 2 80 2R 7511397 7511476 AGGGAGAAAGTTCCTCCAC 58 7511335 7511357 TATCTGGGAGAAGTACAACTGAC 59 NA Drosophila melanogaster 61 CG8490 FBgn0033715 FBtr0087899 1 1 2 177 2R 8222881 8222963 GCTTGAAGACAACCATTGG 57 8223102 8223122 TGGATATGCTAAATCAGGGTC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 1 2 2 80 2R 8372501 8372519 TGCCAATTTGTTCCTCACC 58 8372561 8372635 GACTCTGTGGTTATCACTTGC 59 NA Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 3 2 2 65 2R 9134723 9134741 TTACCAACACCATCTTCGC 58 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299765,FBtr0299755,FBtr0299757 3 3 12 104 2R 9310220 9323715 GTACGAAGATGACGAGGAC 57 9310134 9310152 TTACCGTACTTAGTGGGCT 57 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299759,FBtr0299764,FBtr0299757 3 3 12 93 2R 9306555 9306573 TTAAGACACTGACGGAGGC 59 9305322 9306499 AAACCGGAGTCAGAAGATCG 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0301593,FBtr0301592,FBtr0301591 1 3 15 196 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758835 9759180 CCCTTAAAGCTTTGACGCC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273225,FBtr0087618,FBtr0087619,FBtr0301592,FBtr0273226 1 5 15 200 2R 9805406 9809060 AGTTTAAAGACGAACGCGA 57 9804490 9804508 TCTGCAGCATATGGAAACG 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 2 9 15 127 2R 9759583 9759601 ACCACAAGGAGTTCATGGA 58 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG12424 FBgn0033987 FBtr0087409,FBtr0087410,FBtr0087411 3 3 3 105 2R 10865419 10865743 GCTCATTAAGGTTCGCCAG 59 10865812 10865830 CGTGGTTGTGTAATGGCTG 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 2 4 6 80 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152254 11152334 TACACCAATCTCGAATCCCT 58 NA Drosophila melanogaster 61 CG34365 FBgn0085394 FBtr0112587 1 1 4 171 2R 11304183 11304201 GAGGATCGGGAAAGGATGG 59 11304336 11306866 TACCGAAGAACCTGTCACC 59 NA Drosophila melanogaster 61 GalNAc-T1 FBgn0034025 FBtr0087332,FBtr0087331 3 2 2 81 2R 11400205 11400223 GCTGGACTACTATGTTCGC 58 11400268 11401266 ACGAATCAAACCCAATCGG 58 NA Drosophila melanogaster 61 Flo FBgn0024754 FBtr0087352,FBtr0087351 2 2 2 81 2R 11454801 11454819 TTCCGCATGGAGAAATTGG 58 11454668 11454757 GAATCCTGATCGATTCAGCC 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556,FBtr0302555 2 2 3 60 2R 11589069 11589143 CTCAAGCCTGTGGTACTCC 59 11589027 11589047 TAATCAAAGAGTGTACGGCAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 1 4 7 92 2R 11660745 11661328 CCAACAAGGTCGTAATGTAAGG 59 11660674 11660695 GGGTAAGAGTTCCTATACTGCT 58 NA Drosophila melanogaster 61 Gpo-1 FBgn0022160 FBtr0087308,FBtr0087307,FBtr0112900,FBtr0087309 2 4 4 80 2R 11748024 11748113 CCCATGTGGTTAACAATGCC 59 11747963 11747983 TCAGGGATTTGATCTGATCCG 59 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302790,FBtr0302791,FBtr0302793 2 8 13 82 2R 11835563 11835581 CTAACAAACCTCCGCTTGC 59 11835101 11835517 CGGCTCCTCTGTTCTACTG 59 NA Drosophila melanogaster 61 Ric FBgn0017549 FBtr0300576,FBtr0087254 3 2 2 118 2R 11997163 11997184 TCTGCGGGTCTATAAGATTGTC 59 11996771 11996886 AGGAGTCCTCAATTGTGGG 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 1 6 6 133 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070618 12070703 CGCGTAATTCAACCTTGCA 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0100001 2 1 2 161 2R 12307849 12307867 ACAATGCGCTATATGTGGG 58 12310251 12310537 GATTTCGGCATTCCACCTC 59 NA Drosophila melanogaster 61 CG33960 FBgn0053960 FBtr0100001 3 1 2 162 2R 12307848 12307867 AACAATGCGCTATATGTGGG 58 12310251 12310537 GATTTCGGCATTCCACCTC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113379,FBtr0113381,FBtr0087113 2 3 5 150 2R 12562743 12565925 AGGAAATCAGTACTGGATGCT 59 12562336 12562354 CAGCTGCTTTGTGTTCTCG 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 3 3 4 86 2R 12646816 12646834 CTCTAAGACCTTGGTGGCC 59 12645899 12646767 AAACGTTGCCGTAACTTCTC 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0113089 1 3 4 80 2R 12645897 12646764 AAGTTACGGCAACGTTTGG 59 12645835 12645855 ATTATAGTCCGGTGAAGTGGG 59 NA Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 1 1 1 68 2R 12760787 12760805 ATTGACCATACCTGGCGAC 59 12760906 12760924 CAATACGGATCATTGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 3 3 3 94 2R 12905298 12905579 TGCCTTAACCAGAATCCGG 59 12905222 12905240 ATGGAGAGCACGAATTGGT 59 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 2 2 2 81 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993672 12993690 GAGATCGCATAGCTTGAGG 57 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 3 5 5 182 2R 13400213 13400292 ACTTCTTGAGCCAATCTGGA 59 13400435 13400455 GACTAAGGAACTCAGAGTGGG 59 NA Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 1 2 2 81 2R 13405924 13406004 CTACACCAAGTATAACAAGTTGTCC 59 13406041 13406061 GAAAGGTTCTGAAGCATCCAG 59 NA Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 3 1 1 150 2R 13479588 13479606 GGAACTACGACAAAGTGCC 58 13479392 13479410 TACGTGCTTTCCTTGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4975 FBgn0034266 FBtr0086861,FBtr0299815,FBtr0299816 2 3 3 134 2R 13615578 13615657 CTCGAAACCCATTGATGCG 59 13615755 13615773 TGAGTTCGGTGAGGATGTC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0300540 2 3 7 175 2R 13726719 13726830 TGGAGAAGAGCTTCTACGG 58 13727123 13727141 GCTGGTCAACATGTTCTGG 59 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0301148,FBtr0086690,FBtr0086686 1 4 8 88 2R 14311972 14311990 AACCTCAAGGAGAGCACTG 59 14312162 14312385 CGTTGGTATAGTGGTGCCT 59 NA Drosophila melanogaster 61 l(2)03709 FBgn0010551 FBtr0112863,FBtr0086614,FBtr0112862,FBtr0086615,FBtr0112861,FBtr0086616 2 6 6 111 2R 14707948 14707966 GGACTACGACGAGAAGGTG 59 14708040 14708121 GAGTAGGGATACCTGCTGAC 59 NA Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 3 2 2 81 2R 14865373 14865393 ACGCCAATTCGCTATATTCTC 58 14865433 14865529 GGATTGAGACGGAAATATTCGG 59 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0086599,FBtr0273415 2 2 3 87 2R 14911875 14912157 CGGATGATTATCGCACCAG 58 14911806 14911824 GAGGCTATCAGATGGTGCT 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 3 4 5 95 2R 15024321 15024464 ATCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 3 3 12 82 2R 15064176 15064195 TGATTAGTCACAAGCAGTGC 58 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 wbl FBgn0004003 FBtr0086510 3 1 1 79 2R 15137553 15137571 ATCTGCTAATAGCCACCGT 58 15137818 15137836 GTCGACTTTGTAACGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 1 3 10 145 2R 15295396 15295414 ACCAGGTCATTGAGATCCA 58 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 1 4 4 89 2R 16557768 16557786 GATAAAGTTGAGCTGCCGG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG13502 FBgn0034692 FBtr0071799,FBtr0113103 3 2 2 62 2R 17974258 17974276 CAAGAATGCCAATCCCGAG 59 17974052 17974071 GTGCTATTCAGCTCAAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 3 6 11 89 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996409 17996429 TCCCTTGGCGATTTATATGGA 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847 1 3 4 80 2R 18223208 18223227 CACTATGCCACAACAGATCG 59 18222371 18222450 TTTAGACAGGGAGCTCTGAG 58 NA Drosophila melanogaster 61 CycB FBgn0000405 FBtr0071913,FBtr0071914,FBtr0071912,FBtr0071911 3 4 4 139 2R 18693056 18693180 CCACTAAAGTTACAGTCAAGTCC 59 18692939 18692957 TCCTGAAACTCCCATCACG 59 NA Drosophila melanogaster 61 CG34209 FBgn0085238 FBtr0112402 1 1 1 68 2R 18928883 18928901 AATGGACTTGGATCCGACC 59 18926510 18926528 AACTGGTTCAACCTGAACC 57 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 1 11 13 80 2R 19562497 19562637 GGCGTTAATAGATGCGTAGC 59 19562678 19562698 GATGATGGAGTGCAGTATCTG 58 NA Drosophila melanogaster 61 CG5431 FBgn0034888 FBtr0072080 1 1 2 80 2R 19571965 19571983 ATGTCCGGATACAAGAGGT 57 19572024 19572096 TTACTTCCGAGTGATCTTTCAG 58 NA Drosophila melanogaster 61 Pal FBgn0020623 FBtr0301509,FBtr0089500 3 2 2 134 2R 19576224 19576466 GGGATGTAAACACATTCAACG 57 19576561 19576580 TGTAGAACATGTTCGATCCC 57 NA Drosophila melanogaster 61 l(2)tid FBgn0002174 FBtr0089503 2 1 3 233 2R 19595996 19596161 CAGTAAGCAAGCAACGAGC 59 19596356 19596376 TGAACATGGACTTGATCTTGC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100329 1 2 3 80 2R 19648426 19648445 CGGACATGGGAAAGTATCTG 58 19647294 19648386 ACATATCGAGTTTGGTTATGGC 59 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 1 6 6 93 2R 19748029 19748102 TTATCAAGGGCGTTTCGGT 59 19747954 19747974 GCAGAGTTGTAGTTGTAGCTC 58 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 1 2 4 108 2R 19833770 19833974 AATACCAAACGCCAAGTGAC 59 19834124 19834143 CCGCTAGCGGTAGATATACG 59 NA Drosophila melanogaster 61 Nop60B FBgn0259937 FBtr0300861,FBtr0300229,FBtr0072258,FBtr0100213,FBtr0300228,FBtr0300227 1 6 6 80 2R 20064287 20064305 ACTACAATGCCAAGAAGCC 58 20064349 20064428 TGCTTAACTTGCGTTTGCT 59 NA Drosophila melanogaster 61 CG4589 FBgn0019886 FBtr0072347,FBtr0072348,FBtr0072349 1 3 3 80 2R 20398310 20398390 ACGATATTCGTAAGGTGTTGG 58 20398250 20398270 GACTGATGAGTTCCTCAATGG 58 NA Drosophila melanogaster 61 Start1 FBgn0035028 FBtr0089868 1 1 2 131 2R 20464512 20464531 GCGAATAACATGACGAAACC 58 20464625 20464711 AATGTTCTGCCCTCTTGTG 58 NA Drosophila melanogaster 61 Tina-1 FBgn0035083 FBtr0072411 1 1 2 178 2R 20828953 20829780 AAGCAAAGAAAGTCTCCTCC 57 20828794 20828812 GAAGGGAATGTTGTAGCGG 58 NA Drosophila melanogaster 61 CR42547 FBgn0260720 FBtr0301177 1 1 1 60 2R 17520970 17520988 CAGGTGCATCTTGTAGCTG 58 17520830 17520848 AGATGGTTCGGTTGATGTC 57 NA DesignNoJunction Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 2 9 9 80 3L 143206 143522 TTTGTCCATACGCCAAATCG 59 143564 143583 GTTCTCAATAGCTTCCGACC 58 NA Drosophila melanogaster 61 CG7051 FBgn0035100 FBtr0072539,FBtr0072538 2 2 2 108 3L 151929 151947 TACAATGGTAGCGAAGAGC 57 151782 151860 ATAAAGTATCCCGTTCATCAGG 57 NA Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 1 2 2 80 3L 205419 205437 AGTGAATACGGTCAACGAG 57 203609 205378 GTGATTATTTCCTCAACCTTCC 57 NA Drosophila melanogaster 61 pyx FBgn0035113 FBtr0072524 1 1 2 80 3L 222204 222277 TTTCCTGGAACTAATGACCGA 59 222144 222162 GTATTCTCTACGCTCCCGA 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299985,FBtr0299981 3 2 10 105 3L 298043 298062 TGACTGTGAAATCGTCACAG 58 298130 298967 TTTGGCATTCGTCGTAAGG 58 NA Drosophila melanogaster 61 CG1233 FBgn0035137 FBtr0072549,FBtr0072548 1 2 2 80 3L 364833 364851 CGCACAAGGAGAGTAAACG 59 364895 364974 GAAGGTGTATCCGAAAGGC 58 NA Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072555,FBtr0072554 1 2 2 83 3L 596198 596216 TTGCTAAACGACTGGTCGA 59 596260 596337 GGAAAGACGTTTATTTAGCAGC 58 NA Drosophila melanogaster 61 CG9133 FBgn0035198 FBtr0100645,FBtr0100646 1 2 3 80 3L 1254260 1254278 CAAGAAGCCAAAGGTCGAC 59 1254321 1254413 TCACAGTCGTCCACATTCTC 59 NA Nonspecific Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 1 2 2 140 3L 1307716 1307734 AGATCCCTTTGCAGGACAC 59 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 1 2 4 110 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346352 1346370 ATCCCGATAGCGATTCAGG 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 2 2 4 111 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346351 1346369 CATCCCGATAGCGATTCAG 58 NA Drosophila melanogaster 61 alphaCop FBgn0025725 FBtr0072812,FBtr0072811 1 2 2 80 3L 1644053 1644072 CGCTTCTGGATACTTACAGC 58 1643936 1644014 CAGTTTAAAGACCACCATACCTC 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 3 5 5 99 3L 1743821 1743909 GAACTTGACAAACGGAGCTC 59 1743971 1743989 GAGCAGAACAGGATCCCAG 59 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072779 2 1 3 131 3L 1798834 1798855 CATTTGGCATTCCATTTCAGAG 58 1798946 1799021 CTTTGTCCTAAATGTGCCGT 58 NA InUTR Drosophila melanogaster 61 CG13937 FBgn0035287 FBtr0300716,FBtr0300717 3 2 4 108 3L 1881208 1881226 ATTTGCTCATCTTCACGGC 58 1878549 1881137 ACATTAAAGGCCTCGAATCC 58 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110858,FBtr0110856 1 2 4 108 3L 2124602 2125246 TCAATACGGAACCAAATGCG 59 2124513 2124531 GACAAACTTGTGACCCTCG 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 1 7 12 80 3L 2436164 2436184 CAATCATTGCCAGTAGAACCC 59 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 msn FBgn0010909 FBtr0072957,FBtr0072956 2 2 5 160 3L 2558380 2560124 AGTGAGGAGTATCAAGCGG 58 2558238 2558256 AGCGATATCGTCGATTGGG 59 NA Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 3 2 2 89 3L 2593242 2593264 CCGCGTAGTCATAATAACATAGG 59 2593313 2593399 GGCCAATTGTTGCAGACTC 59 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0072936,FBtr0072934,FBtr0072932,FBtr0072935,FBtr0072931,FBtr0072933,FBtr0290340 2 7 7 60 3L 2640509 2640589 GTGGAAGGATGTACCAATGG 58 2640611 2640630 AGGGTCATATGATGATCGCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG42303 FBgn0259199 FBtr0299683 3 1 1 67 3L 2653636 2653654 CTCTGATGCAGAGTCCTCG 59 2653745 2653763 TGCGTTGCAACATGTTCTC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ens FBgn0035500 FBtr0073267 2 1 6 175 3L 4132209 4134469 TCGACTAATCCAGAAGCGTC 59 4132053 4132071 GTACGGATCTCCTCGATGC 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 2 7 7 175 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595935 4596071 CAAAGAACCAGTCTTCGCT 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 3 3 10 82 3L 5535644 5535664 TAATGAGGGAACCTACACGAG 59 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 1 4 8 93 3L 5733294 5739572 GATGAAGGACCTAGGGTCC 58 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 2 4 8 95 3L 5733292 5739571 CTGATGAAGGACCTAGGGTC 59 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 Myt1 FBgn0040298 FBtr0077118 2 1 1 60 3L 5771068 5771086 AAATCCCGTCTGGATTTGC 58 5770968 5770986 GTACATGAACGTACCTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 PGRP-LD FBgn0260458 FBtr0091711,FBtr0091710,FBtr0091709,FBtr0114577 1 4 4 80 3L 5775398 5775778 CTGGAGACAAACCCAAACG 59 5775821 5775840 TGAAGTTCCATATCCGACCA 58 NA Nonspecific Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091477 1 1 4 99 3L 5921000 5921336 TTAGTTACGTCACCTTTGTCG 58 5921637 5921655 GGATTGATGTGCAACATGC 58 NA Drosophila melanogaster 61 sfl FBgn0020251 FBtr0301562,FBtr0076968 1 2 2 80 3L 6540631 6540649 AAATGCCTCGGAAAGTCCA 59 6540691 6541796 GAGATAGTATCGCTGCAACAG 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301958 3 1 11 176 3L 7042666 7043281 AATACGAAACGTGGTATCCG 58 7044342 7044361 TGGTGTCCAGATTCTGTACC 59 NA Drosophila melanogaster 61 CG42307 FBgn0259203 FBtr0299692 1 1 3 85 3L 7324255 7324276 CGCTGAAATAGAAATTGTGTCC 58 7324321 7324400 CAGTCTTTACTTCGTCGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG7526 FBgn0035798 FBtr0301221,FBtr0301222,FBtr0290277 2 3 3 87 3L 7558076 7558156 TAGCTGCCTCGATATCGAC 58 7558201 7558225 GCTACATTTATATTCTCCTGGAAGG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 1 2 15 85 3L 7655388 7656366 TGAAATTGATCCGGTTGCA 58 7655321 7655339 CACTCTCGTCTTCAGTCTG 57 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300500 1 1 7 127 3L 7823584 7823602 CAACAATGTGTCCTCCGTG 59 7811312 7823493 ATGTGGATTTGCCTGAGCT 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499,FBtr0076776 1 2 7 85 3L 7811310 7846290 CATTAATGGCAAATCCACATCG 58 7811246 7811264 CAACATTCCAGATGTCGCC 59 NA Drosophila melanogaster 61 pbl FBgn0003041 FBtr0076772,FBtr0076771 3 2 5 181 3L 7900432 7904533 AATCGAAGTGCGAGATGTC 58 7900269 7900287 ATCCAGCACGTAGAATGTC 57 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767 1 1 2 91 3L 7967215 7967740 TTCATGTCGTGTGGAGGAG 59 7967142 7967160 TGGAGGTTGATACAGCAGC 59 NA Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767 2 1 2 92 3L 7967216 7967741 GTTCATGTCGTGTGGAGGA 59 7967142 7967160 TGGAGGTTGATACAGCAGC 59 NA Drosophila melanogaster 61 nmo FBgn0011817 FBtr0076759,FBtr0076754,FBtr0076757,FBtr0076756,FBtr0076755,FBtr0076758 3 6 6 104 3L 8040453 8040471 AATGCGTCAGTATACGGCT 59 8040539 8040616 TGCATCTCCTCTTTGACCT 58 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112601 1 1 5 85 3L 8072665 8072683 CAAATGCCTCAACCAGTGG 59 8072729 8086167 GTCTGTCATCTGATAATGCTGC 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0300426 1 2 5 80 3L 8574884 8574903 AAGCAAATAGGGCAATTCCC 58 8574946 8579079 GTAGCGACACAATCACTGG 58 NA Drosophila melanogaster 61 pix FBgn0086706 FBtr0076558,FBtr0076557 2 2 2 82 3L 8966608 8966629 CTCGTATTTGGATGTTAAGCAG 57 8966488 8966568 CCACAATAATAAACTTGGTGGG 57 NA Drosophila melanogaster 61 Doc2 FBgn0035956 FBtr0076547,FBtr0100367 3 2 2 134 3L 9007697 9007715 CATGCACAAGTATCAGCCG 59 9006711 9007599 ATGCGATCGTTCTGGTAGG 59 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0301435 3 1 3 121 3L 9660884 9660904 CATATTTGCGTCTTTGGAGGA 58 9658781 9660804 GTCCGACTGATCTTGTAAACTC 58 NA Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 3 2 2 98 3L 10081407 10081905 TGGCATATACCTCCAGTGG 58 10081327 10081345 CACTGACGCTACTGTAGCA 59 NA Drosophila melanogaster 61 CG32062 FBgn0052062 FBtr0076289 3 1 5 192 3L 10580768 10580787 ATCCAAATCTACGCTTCCAG 57 10582610 10583231 TAGGTTTCTACACCAGCCA 57 NA Drosophila melanogaster 61 CG14154 FBgn0036093 FBtr0076257,FBtr0076258 1 2 2 105 3L 10635606 10635624 CATCTGCTCAAGTGCTGTG 59 10635691 10635813 GCGTTAAGAACATCATCTCCC 59 NA Drosophila melanogaster 61 CG32082 FBgn0052082 FBtr0076216,FBtr0113423,FBtr0113422 1 3 3 85 3L 11152078 11152408 ACAAGAATGCCATGACACAG 58 11152455 11152474 GTAGACCATCCAGTGTTTGG 58 NA Drosophila melanogaster 61 GlcAT-P FBgn0036144 FBtr0100422,FBtr0076189,FBtr0076190 3 3 3 87 3L 11171621 11171757 GTGCAGAGATATTCTCACGTG 59 11171554 11171572 GTTCGTGTTCTTGTAGCGC 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 1 5 5 115 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 Nrx-IV FBgn0013997 FBtr0075999 3 1 2 80 3L 12144437 12144457 AGTACACCATTAGCTATGGCA 59 12144497 12145286 CCTTGAACATCTTGACATTGC 58 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075982,FBtr0075984 3 2 3 80 3L 12406591 12406610 ATCGATATCCACGACCTGTC 59 12405539 12406550 CGACTGCTGAAGGAATTTCTC 59 NA Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0300888,FBtr0300887 3 3 4 89 3L 12558039 12558057 CTAATTACCAGGAGCTGGC 57 12534465 12538505 AGTGTAGAGCGGTATAGCC 58 NA Drosophila melanogaster 61 Atg1 FBgn0260945 FBtr0300561,FBtr0075945 1 2 2 80 3L 12781718 12790792 GGTCATGGAGTATTGCAATGG 59 12781658 12781676 AGTCTAACGGTATCCTCGC 58 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 1 3 3 88 3L 12788111 12788129 TTACAAATCCGCCCATCGT 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG11009 FBgn0036318 FBtr0075934 3 1 3 122 3L 12844713 12844731 AAATGGCTATCCAGGTGGA 58 12844815 12845356 GTACAGTAGTTTGTTCCAGGG 58 NA Drosophila melanogaster 61 CG11263 FBgn0036330 FBtr0300699,FBtr0075873 1 2 2 60 3L 13000410 13000434 GGGAGGAATATTTGATACCTTTGTG 60 13000450 13000470 GTACGGAATTCTTGTGTTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100044,FBtr0100043 3 2 6 150 3L 14219495 14223285 AATGAGCAACTGGAACTGC 58 14223399 14223762 GTTCCGACTCTCGGTACTG 59 NA Drosophila melanogaster 61 CG34039 FBgn0054039 FBtr0301015,FBtr0301014 2 2 2 103 3L 14555005 14555027 CTGAGATCATATCAACACTCTCG 58 14555088 14555160 TTTCGCTTCCTCAAATGTCTC 59 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 2 3 3 80 3L 14620524 14620543 TTGCTATGTGACCTTTGGAG 57 14620586 14620664 CATGGAGTCAAATCACCGA 57 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110880 3 2 4 95 3L 15301925 15304066 GATGATTGTGGGACTTTCCA 57 15304123 15304142 TATTTGAGCTTCTGCCATCC 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299645 2 3 7 80 3L 17535995 17536013 ATGTGGATCATCGTCAGCA 59 17536057 17536617 CGGTGTCTTCATTCGATGG 58 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 3 2 3 84 3L 18880214 18880233 ATACTACTTTGCAACGAGGC 58 18874340 18880167 TTGTTCTGGACCCTCTAGC 58 NA Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 1 1 1 70 3L 19121831 19121851 GTATAATTCCTTCGATGCCGA 58 19121714 19121732 TATCGTCGAAGTCATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 2 1 1 71 3L 19121832 19121852 AGTATAATTCCTTCGATGCCG 58 19121714 19121732 TATCGTCGAAGTCATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 pip FBgn0003089 FBtr0075008 1 1 12 80 3L 19297391 19297474 TCACGATGATTGCCTACCT 58 19297329 19297349 ACAACAGCATAATCCCTTTCC 58 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301603,FBtr0301604,FBtr0301606,FBtr0301607 3 4 5 114 3L 19794611 19794630 CTCCATTTGGAGATCTCTGC 58 19794704 19794782 CAAGATGTTAGGTTGATCTTGG 57 NA InUTR Drosophila melanogaster 61 Mi-2 FBgn0013591 FBtr0302046,FBtr0074919 3 2 3 112 3L 19903143 19903164 GAGAATGACGATAATTTCCAGG 57 19881562 19881642 TCGTCTTCGTCGTTATTCG 57 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078187 2 1 5 134 3L 20379947 20381779 GCTTATGTCGATGCCATGG 59 20381876 20381895 AAGTAGCGTCGGATATTCCG 59 NA Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0078222,FBtr0300452 3 2 2 91 3L 20465772 20465790 CAAGAGATGTCGCTACGAC 58 20464207 20464227 CCTGCGTTCCAATTATTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32428 FBgn0052428 FBtr0078222,FBtr0300452 3 2 2 78 3L 20465759 20465777 TACGACGAGTCTGACTTGG 58 20464207 20464227 CCTGCGTTCCAATTATTTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 3 4 4 82 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508473 20508551 TCAACCATAGCCCGAATCC 59 NA Drosophila melanogaster 61 siz FBgn0026179 FBtr0301602 3 1 4 146 3L 21041881 21061820 ACGAGATTTACTGCTTTCCC 58 21061927 21061947 GATTCTGCAGGTAAACATAGC 57 NA Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317 1 1 2 80 3L 21191192 21195857 TCACTACTACAACTACGTAGCG 59 21191133 21191152 TTCGCTTAGGGTGTACTGAG 59 NA InUTR Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 3 2 2 135 3L 21297182 21297399 CAAAGACAACGTCGTTACTG 57 21297066 21297085 GATCACTGCCGGTAATAGTG 58 NA InUTR Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 1 3 3 80 3L 21414147 21414218 GGTTATCTATGATCGCCATCC 58 21414087 21414106 ATTTGAATGACGAGGTCAGC 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 3 3 3 85 3L 21562983 21563064 ATCGGGTTCAGGACTTCTC 58 21563112 21563131 GTTGATCAGGTCTTCGTCAC 58 NA Drosophila melanogaster 61 CG11426 FBgn0037166 FBtr0078506 3 1 1 60 3L 22463862 22463883 AATATGCCATCGTAAAGGATCC 58 22464973 22464994 TTTCCAGATTAGACAAGAGCCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6838 FBgn0037182 FBtr0078540,FBtr0078539,FBtr0113187,FBtr0113186 1 4 4 87 3L 22709291 22709405 TCAGTAAGGATCCAAACCCA 58 22709223 22709241 TTAAGCAGATTCACGCTGG 58 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG32230 FBgn0052230 FBtr0070041,FBtr0070040 3 2 2 90 3L 23332716 23332734 ATGTCACTTGGAATCGCAC 58 23334563 23334582 GAATAATCCCTCACAGGCGA 59 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA InUTR Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0078898,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 1 7 21 194 3R 110113 120844 TTAAGTGCCGTTAAAGGCG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG31534 FBgn0051534 FBtr0078865,FBtr0078866,FBtr0273375,FBtr0273376 3 4 4 80 3R 534701 534721 AGTCCATCGAGGATAAGATCC 58 534763 534891 GTTCCTCTTGCGAGAAGTG 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 3 6 10 106 3R 570265 570283 TAAGCCAGAAGACGACCTC 58 569896 570198 TCAGTTGAGTATCCATATCGGT 58 NA Drosophila melanogaster 61 Vha26 FBgn0015324 FBtr0078701,FBtr0078700 3 2 2 92 3R 1418495 1418592 GTCTGAAGGTGCTGAAAGTG 59 1418647 1418665 CGGACTGATTCTTGGTGAC 58 NA Drosophila melanogaster 61 Rm62 FBgn0003261 FBtr0302597,FBtr0078650,FBtr0301947,FBtr0078652,FBtr0078654,FBtr0078649,FBtr0078651,FBtr0078653 2 8 9 153 3R 1829623 1829748 AGGAGGAGAAATTGAAGACCC 59 1829490 1829508 TCACCGTGAATAGCTCCAC 59 NA Drosophila melanogaster 61 Obp83ef FBgn0046876 FBtr0078618 2 1 1 129 3R 1936680 1936698 GTTCCTGATCTGCAGTCAG 58 1936077 1936095 AGATGAATACCGTTCCAGC 57 NA DesignNoJunction Drosophila melanogaster 61 Osi19 FBgn0037429 FBtr0081707,FBtr0301493 2 2 2 118 3R 2161353 2161649 AGACAGCTTCCAGGTTTCC 59 2161728 2161749 GGATATAGTTCTCAATGGCGTC 58 NA Drosophila melanogaster 61 CG33097 FBgn0053097 FBtr0081735,FBtr0110852 2 2 2 80 3R 2192121 2192141 ACGAGGTTATCAAGATACGCA 59 2192001 2192082 ACTTGGAAATCATTCGAACTCG 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0081734,FBtr0110774 1 2 2 87 3R 2199081 2199099 AACGTCTGAGCGAATCCTC 59 2198947 2199033 GGAGTTCTTGGTCAAATTCCAC 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 2 4 11 95 3R 2724255 2734259 CGAAGTCAGTTTGAACGCA 59 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 1 6 11 80 3R 2724256 2734248 TGGTAAGTGTCAAGAACGC 58 2724194 2724214 AAGTGAAACTCCTTCTCTAGC 57 NA Drosophila melanogaster 61 CG10445 FBgn0037531 FBtr0300685 1 1 2 101 3R 3745200 3745218 TTGTACTCCGGTCTGAACC 59 3744991 3745137 ATACAGGGTCTTCAGACTGTC 59 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 1 1 1 69 3R 4116238 4116256 TCTGGGAGTACTTGCTCTG 58 4116125 4116145 CATCTTTGTTTCATAGCCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112822 3 1 8 128 3R 4659861 4659879 AATGCGTCCCGTAATATCG 57 4659451 4659707 ATGATAGCGTCTGTATTTGCC 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0112823 3 2 8 103 3R 4668550 4690517 TGAATTCTTTGGTGATCGAACC 59 4668468 4668486 GATTATCACGTCCACCGGA 59 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0082038,FBtr0111030 2 2 14 96 3R 5262829 5269739 AGCAAAGCTTCTGTGAGTC 58 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 1 3 3 88 3R 5399131 5399149 GTACAACGGGATGATTGGC 59 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0300565,FBtr0300564,FBtr0082092 1 3 4 70 3R 5520937 5521013 TAACCTAGAGCGCCATCTG 59 5520885 5520903 GATAGAACTCCGACCTGGC 59 NA DesignRelaxed Drosophila melanogaster 61 Fmr1 FBgn0028734 FBtr0082199,FBtr0082200,FBtr0082198 2 3 6 80 3R 5930727 5930805 GTGTTTCGAATCAAGATCGCT 59 5930667 5930686 GAACACAAAGGGTACATGCG 59 NA Drosophila melanogaster 61 fau FBgn0020439 FBtr0082307 1 1 4 80 3R 6597628 6597646 ATTCGTGACTTGCACACTC 58 6597174 6597584 CGGCTCATAGGTGTAACCA 59 NA Drosophila melanogaster 61 CG4511 FBgn0037843 FBtr0302202,FBtr0082286 2 2 2 136 3R 6680674 6680692 GATGACCTAAAGGTCCTGC 57 6681052 6681071 TTCGACATCTCGAAGAACTC 57 NA DesignNoJunction Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273345 1 1 7 98 3R 6691358 6692259 GCATACCAGTAGTCATTTCGA 58 6691280 6691298 GTCCATCATCGAAGACGTG 58 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0302586,FBtr0082347,FBtr0082346,FBtr0082348,FBtr0302585 2 5 5 127 3R 7047972 7047990 GGTAAGGTTAAGGCCTTCC 57 7048081 7048292 TTGTTGATCTTGGAGCCAG 57 NA Drosophila melanogaster 61 CG6923 FBgn0037944 FBtr0082432,FBtr0082433 2 2 2 110 3R 7574588 7574606 TAGCTTGGAGAACGACCAG 59 7574441 7574514 ATCGCATACTGGGAATGGT 58 NA Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301042 2 1 2 97 3R 7717505 7717585 TTCAAGCTTCTAACACAGAGAC 58 7717643 7717661 TCTTGACTGGCTACAGCAG 59 NA Drosophila melanogaster 61 CG6971 FBgn0037962 FBtr0082514 2 1 1 88 3R 7718580 7718598 AGACAGGTATTTGTCCCGT 58 7718457 7718476 ACGCTCTGAACAGTTAATGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082509,FBtr0082510 1 3 3 100 3R 7792837 7792917 GATGCAATCCCTGAATGCC 59 7792755 7792773 CCAACTGACCCTCGTACTG 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 3 5 5 75 3R 8270796 8270814 CCTACCTCATGGTCACCTC 58 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 Octbeta2R FBgn0038063 FBtr0301646,FBtr0100019 2 2 2 80 3R 8378964 8379504 CCTTTCTTCCTGTGGTACAC 58 8378903 8378922 CCAGAAGAGGATTGAGACGA 59 NA Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0114499,FBtr0113228,FBtr0114500 2 3 6 62 3R 8522001 8522020 AGTCTGTCCATAGTCATGCA 58 8522469 8522487 GTTGAGACTCCCGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300589 3 1 8 84 3R 9488693 9488711 TCATCCTCTCGTTATGGCC 59 9488758 9491186 ATCCTTGAGATCTAACGCGG 59 NA Drosophila melanogaster 61 f-cup FBgn0028487 FBtr0112937,FBtr0112938 3 2 5 118 3R 9522484 9522563 AAACTTTCCGGATAGCTTTCAC 59 9522387 9522405 TTCTGAGCGGCTCATACAC 59 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091747,FBtr0091748 3 2 3 120 3R 9536124 9536142 CAACATGAGCGAGCTAAGG 58 9535867 9536040 TCCACGCTCATAGTAGGGA 59 NA Nonspecific Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 1 2 2 80 3R 9600882 9600961 ATAAATCACGAGGATGAAGACC 58 9601001 9601020 TACTTTGCCATCTCCATCCA 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 2 5 5 80 3R 10090933 10090955 GATAACCTTGTAGTTGATGCCAC 59 10090815 10090894 CGAATAGCAATTCGGCTCAC 59 NA Drosophila melanogaster 61 CG7987 FBgn0038244 FBtr0082978,FBtr0082979 2 2 2 120 3R 10399021 10399040 TTGCCAAAGATTCTTCTGGT 57 10398848 10398938 CATAGGACGCACTTGAAGG 58 NA Drosophila melanogaster 61 stumps FBgn0020299 FBtr0112893,FBtr0082958 3 2 3 112 3R 10418461 10418479 AATTCTTGCAACGAGACCC 58 10418554 10418734 GATTTGCTACTTGTTGGCGA 59 NA Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 2 2 2 80 3R 11029204 11029285 TGGAACTTAATCCTATCCTTGC 58 11029145 11029163 AGGTCAGATCATCGAAGGT 57 NA Drosophila melanogaster 61 CG32856 FBgn0052856 FBtr0302551,FBtr0083239 3 2 2 105 3R 11790730 11790804 TCACTAAAGGTAGAGGAGCTG 58 11790645 11790664 CCGACAGATCTATGTGGAGG 59 NA Drosophila melanogaster 61 CG10317 FBgn0038423 FBtr0300677,FBtr0300678 3 2 2 99 3R 12195611 12195629 TTCCAATCGGCCAATACTG 57 12195390 12195549 TACGCACGCCTTTATTAGTG 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0299894,FBtr0299897,FBtr0299896 3 3 5 135 3R 12391317 12391403 CCATCGAATACTTATATGGCCC 58 12391566 12391584 CCCTGATCTCCCTTGTGTC 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0300037 3 1 6 94 3R 12462522 12462715 CGAATGGACTGGCTATGTG 58 12462772 12462791 CGATGACGTGGATAATTCCG 59 NA Drosophila melanogaster 61 Abd-B FBgn0000015 FBtr0083382,FBtr0083385,FBtr0083384,FBtr0083381,FBtr0083383 1 5 5 80 3R 12755406 12755425 AATGCGTATGTTTCCAAGCA 58 12755288 12755365 GAACCATATCTTGACCTGTCG 58 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089896,FBtr0089897 3 2 3 111 3R 13219465 13219546 GTGAAGAAGATGGATCCTAGC 58 13219302 13219322 CGCAAAGGTAGAAATTGTGAG 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 2 3 4 80 3R 13308082 13308444 CATAAGTCGCAGCTATGACAG 59 13308022 13308040 CGAATCAGAAAGGTGGTCG 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0089444,FBtr0113397,FBtr0089443 2 3 4 80 3R 13308082 13308444 CATAAGTCGCAGCTATGACAG 59 13308022 13308040 CGAATCAGAAAGGTGGTCG 58 NA Drosophila melanogaster 61 CG5840 FBgn0038516 FBtr0083454,FBtr0083455 3 2 2 90 3R 13362400 13362418 TCAGACAACTCGAGCTGTC 59 13362544 13362562 GTCTTTCCCGAGATTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 sr FBgn0003499 FBtr0083542 2 1 3 80 3R 13922387 13922505 TCAATTAGCTCAGGCCGAG 59 13922547 13922567 TTGCCATACAAGTAGGGACTC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083649 3 1 14 121 3R 14329661 14329680 AACATAGACAGTGCCTCCTG 59 14261504 14329578 GTGTTGTACCAAAGAGGCAG 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 3 3 14 92 3R 14340833 14340852 GGAACATCGAAACGGATGTG 59 14261499 14340779 GGTCAGTGTTGTACCTAGGG 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110919,FBtr0083765 3 6 8 89 3R 15332380 15332399 AAACTGATTGCCGTCTATCC 58 15332448 15332581 GCTGTTTAGGTTAGCATATCGT 58 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 1 2 2 80 3R 15681155 15681173 CCAACATACTCTCCCACGA 58 15681031 15681112 CAGCAAGGATAATTCGGCTG 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083828,FBtr0273259 3 2 5 151 3R 15842344 15842362 GACATTAAGGAGCGAACGG 58 15842474 15842559 AGATTGCCTATTCTGTCATCCT 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 3 1 2 172 3R 16406033 16406120 GTTCAAGCGATATGATGGCA 58 16406317 16406335 TGAACTGCGAGTACATGCT 59 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956 1 1 2 131 3R 16733237 16733255 CTGGGATTCGCCAATTTGG 59 16733348 16733666 CTTGAAGCTCACCTTGTTCTC 59 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 3 3 4 175 3R 16881621 16881701 AGTTTGTTAATGGACTGGGC 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 Mvl FBgn0011672 FBtr0089521,FBtr0301477,FBtr0301478 2 3 4 174 3R 16881620 16881700 GTTTGTTAATGGACTGGGCA 58 16881402 16881422 CACAAGGTAGAGGTTGAACAG 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084067,FBtr0084073,FBtr0084063,FBtr0084065,FBtr0084078,FBtr0084069,FBtr0084071,FBtr0114360,FBtr0084070,FBtr0084061,FBtr0114361,FBtr0084076,FBtr0084075,FBtr0084062,FBtr0114359,FBtr0084064,FBtr0084077,FBtr0084074,FBtr0084066,FBtr0084060,FBtr0084068,FBt 3 22 22 80 3R 17202594 17202612 TGGTGTTATCCGTCTGCTC 59 17202455 17202551 TCAGGAATACGATAGCGTGG 59 NA Drosophila melanogaster 61 CG13409 FBgn0038926 FBtr0084184 1 1 2 82 3R 17856409 17856432 CCAATCTATGATTGGTCCATTGAG 59 17856293 17856368 GGGAAGAAGGGATTGTCGT 59 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0084303 1 1 2 118 3R 18520902 18521216 GGCATCACCTTTATAGCGA 57 18521297 18521316 CTATCCGATCCATTGACGAC 58 NA Drosophila melanogaster 61 wge FBgn0051151 FBtr0110835,FBtr0084328 1 2 3 131 3R 18543031 18543051 GCGGCAATTTGTACTTTACTG 58 18542764 18542940 GTAATGCATTTGGATACTGCC 57 NA Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607 3 1 2 93 3R 18833782 18833800 TCGTGACCCTGATGATGTG 59 18832387 18833726 TGTTGATTAATGCCGTGCAC 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 Rpn9 FBgn0028691 FBtr0084469,FBtr0084470 1 2 2 62 3R 19558364 19558384 GCTCTACCAGAATTTCCTGTC 58 19558269 19558287 ATCTGGATGAGGCCATAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 3 2 2 111 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594258 19594276 ATAACGTAGATGGCGTGCT 59 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 1 3 3 96 3R 19633219 19633303 ATTCACAATCTCACCAGCGA 59 19633142 19633160 GTTCAACAGAACCGAGCAC 59 NA Drosophila melanogaster 61 Ets96B FBgn0039225 FBtr0084696 3 1 2 162 3R 20618822 20618841 AAGACGTCACCTATACCACC 59 20618966 20620054 TGACATTCACGTTGCAGAG 58 NA Drosophila melanogaster 61 polybromo FBgn0039227 FBtr0084740 1 1 1 73 3R 20628312 20628330 CAAGAAAGTTGTCCCGCAC 59 20628199 20628220 CTTGCGAATGAAGTATGTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084733,FBtr0084732 1 2 2 60 3R 20683123 20683143 ATGTAAAGTGCGGTGAAAGAC 59 20683023 20683103 CATGTAATGGCATTGCATGAC 58 NA DesignRelaxed Drosophila melanogaster 61 CG6422 FBgn0039261 FBtr0113281,FBtr0084795,FBtr0084794 3 3 3 84 3R 20864033 20864155 GATGAAGTCTCTGGCAATGAC 59 20863969 20863987 TGTTCCATGGAGTGTTGCA 59 NA Drosophila melanogaster 61 CG11791 FBgn0039266 FBtr0113283,FBtr0084763,FBtr0084762 3 3 3 62 3R 20877260 20877278 CTACAATTGCCTGAGTCCG 58 20878230 20878248 CGAAATCCCTTAAAGCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 2 4 4 80 3R 21448132 21448153 GATCAATATTCAGCCGGATGAG 59 21448013 21448094 ATCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290141 2 1 5 92 3R 21736984 21737002 ATCATAAAGGGCACCCTGG 59 21737056 21737135 GAGTGTAAATTCAGGCCACTC 59 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 1 3 3 80 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905450 21907624 CAAGACAACCTTCTGATCGC 59 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302102,FBtr0302103 3 2 10 82 3R 22423774 22423795 GGAGACCCAGGATGATAAAGAG 59 22423835 22424309 GCTTCTCAGCATTAATCATGGA 59 NA Drosophila melanogaster 61 CG14252 FBgn0039462 FBtr0085067 2 1 1 60 3R 22771842 22771861 AATGGAAGGACTATACGCAG 57 22771944 22771963 ATATAAACAGAAGAGCGCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 2 5 5 124 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102110 23102128 GATTTCTTCAGCACTCCGT 57 NA Drosophila melanogaster 61 Hrb98DE FBgn0001215 FBtr0085298 3 1 6 101 3R 24425713 24426439 GAGCAAGATGACTTTCCTCAG 58 24426502 24426520 CTTTAGGTTCTCGTCGGTG 58 NA Drosophila melanogaster 61 CG9990 FBgn0039594 FBtr0085309,FBtr0085308 2 2 3 97 3R 24518605 24518623 TCTACAAGTGCATCAGCCT 58 24518681 24518867 GATGTTGTTACTGAAGTTCACG 58 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085354 1 1 3 107 3R 24652885 24653014 AACTGAAGACACTCAACACC 58 24652797 24652815 TATCCTTGACGAAGCACAC 57 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085369,FBtr0085366 2 2 4 90 3R 24941220 24941300 CAAGAAGGGTATTGAGGCTG 58 24941353 24941371 GTGGGTCTTTCGTACAGAG 57 NA Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 2 1 1 190 3R 24973675 24973693 CGACGAAGACGTCTTTGTG 59 24973433 24973451 AGGGTCCAATGAACAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 kay FBgn0001297 FBtr0290076,FBtr0099988,FBtr0099989,FBtr0099990 3 4 4 166 3R 25617434 25617518 CCGATACTTCAAGTGCCCA 59 25617647 25617666 ATTTGAGGTATTCGCGTTGC 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 2 4 5 82 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211909 26211927 CCTTGATCTCCAGGTCGAG 59 NA Drosophila melanogaster 61 aralar1 FBgn0028646 FBtr0085695,FBtr0085694 1 2 4 105 3R 26275673 26275960 TTTGCCAAATTCTCCGTCG 59 26275586 26275604 GGTCATATAGTGCTCGCCA 59 NA Drosophila melanogaster 61 PH4alphaSG2 FBgn0039779 FBtr0085653,FBtr0085654 1 2 2 90 3R 26317439 26317457 ATCTTCATCGATCCCTGCA 58 26317511 26317597 ATCCAGATGTTGCCAATCC 57 NA Drosophila melanogaster 61 tmod FBgn0082582 FBtr0085663,FBtr0302112,FBtr0302600,FBtr0085660,FBtr0302111,FBtr0085659,FBtr0302601,FBtr0085661,FBtr0085658,FBtr0113483,FBtr0085662,FBtr0302110 1 12 12 84 3R 26398250 26398333 ACATTAAGAACATCTCGGACG 58 26398379 26398397 GTTAGCGAGAGGACTTCCA 58 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 2 3 3 80 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028838 GAGTGTAGTAGTGCTTTCCAC 58 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 3 4 4 108 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230067 27230141 TCATGTTACGTCCATTGCT 57 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 1 5 5 80 3R 27427068 27427150 CAAGGAATCAAGGCGTGAG 58 27427006 27427024 TCGTACCACATCTTCAGGC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 1 8 10 80 4 115558 115579 ACGAGATAACTATGGTTACGTG 57 115618 120041 ATATTATTGCCTCCCGAATCC 57 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0301340 1 1 3 144 4 756804 756973 AAATAATCAGCACGCCGAC 59 757080 757099 TGTATCCTTTATCACGGGCT 58 NA Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 2 2 2 80 4 803970 803989 GTCAACAAATCGAGATCTGC 57 803853 803930 GGAGAATTCATTGAAGTGTCTG 57 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 3 3 5 117 4 886473 886570 CACTTGGCAATAACCGCTC 59 886374 886394 TGGTATATCGGATGATAGGCC 58 NA Drosophila melanogaster 61 CG32016 FBgn0052016 FBtr0089231,FBtr0089234,FBtr0089233,FBtr0089230,FBtr0089229,FBtr0089232 2 6 6 100 4 974715 974733 AGAAATCCGGTGGTCACAG 59 974513 974653 TGCGAATGCAATTCTTGAGAG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089219,FBtr0100147 2 2 9 102 4 1065793 1065814 CTAGCACTACTCTTGAAGACGA 59 1059051 1064099 TGTCGTCTAGCTGCTTCAG 59 NA Drosophila melanogaster 61 sv FBgn0005561 FBtr0100344,FBtr0100346,FBtr0100343,FBtr0089327 3 4 8 87 4 1129191 1129748 TTACACAGCTCTAGCATTTGAC 58 1129796 1129814 TACAATGTGTTCTTGCCCG 58 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091631 3 1 3 81 4 1247981 1248073 ATAATCACAGTACACCGTCGT 59 1248865 1248883 TCCTCTGAATCACCCTCCA 59 NA Drosophila melanogaster 61 pncr013:4 FBgn0041005 FBtr0091952 1 1 1 197 4 488183 488204 TGTTCTAGTCGAGTATTCACAC 57 488417 488437 GGTCAGATCAATGTTGATGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG17707 FBgn0025835 FBtr0112918,FBtr0300673 3 2 2 81 X 40880 40956 AGCCAGAAAGTACTTCAAAGC 58 40819 40843 GGATATTATACCAGAAATGCTCCAC 59 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334,FBtr0070336,FBtr0302435,FBtr0070335,FBtr0300255,FBtr0300254 3 6 7 78 X 1965423 1965441 AAGGAGTACAAGACCACGG 59 1962427 1962445 ACTTGGACTGGTAGGAACC 58 NA DesignNoJunction Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 2 2 2 91 X 2167972 2168066 TTGTATAGGAAACGCTTCCCA 59 2167901 2167919 GAGAATTCATCGGTGTCGC 59 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0112828 1 1 15 151 X 2562849 2563669 CAGTACAAGGACCCAAGCA 59 2563784 2563961 TTAGAACCATCGCGACCTG 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070517,FBtr0070516,FBtr0070509,FBtr0070513,FBtr0070515,FBtr0070518,FBtr0070511 1 7 12 80 X 3215179 3215197 ATATCGCTCCGATTCGGAC 59 3215239 3219968 TCTTTAAACCTTTCGCTAGCG 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 3 6 7 81 X 3593450 3593470 CTAAAGCAACTGAGCTTAAGG 57 3593513 3593728 CCAGACAAACTGCTTTGTC 57 NA Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 1 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 2 2 2 83 X 3791673 3795152 ACCTGAGTCTCGATGATGAC 59 3791609 3791633 GATCAATAATCTCCAAATCCGTCTC 59 NA Drosophila melanogaster 61 CG42541 FBgn0260658 FBtr0301100,FBtr0301099 3 2 2 83 X 3799819 3799837 AATAGCATCGGTGGAGCTC 59 3798614 3799772 TAGTGACATGCGATCCCTG 59 NA Drosophila melanogaster 61 Fas2 FBgn0000635 FBtr0070666,FBtr0070667,FBtr0070665 2 3 3 82 X 4037775 4043429 AAACTTACGTGGCCATCAC 58 4037711 4037731 CTCGCACATTACCACATAGTC 59 NA Drosophila melanogaster 61 rb FBgn0003210 FBtr0301530,FBtr0070702 2 2 2 85 X 4432734 4432817 AATCATGACGAACACGTGG 58 4432667 4432686 ATAATCTCAAAGTGCTCGGC 58 NA Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0070740,FBtr0301914,FBtr0100408 3 5 5 114 X 4962726 4962744 CAATCTCTGCGAGAAGAGC 58 4962822 4962936 CACGTACATCTTGGCTCTG 58 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0290088 1 1 5 80 X 5123367 5123387 GATCATTCCTGAATCTGACCA 57 5123428 5127454 AACAGAACAACTGTTTGAGC 57 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301950,FBtr0301951,FBtr0301952,FBtr0301949,FBtr0301954 3 5 7 103 X 5277589 5277610 CTCTAATGACAATATGTCCGGG 58 5277674 5282287 CTCATCGTGGAACCTTTCG 58 NA Drosophila melanogaster 61 SK FBgn0029761 FBtr0301952 1 1 7 91 X 5292787 5293576 ACATTCTAGAAGTGTTCCCTC 57 5293625 5293647 GTGTTCTACTAGATATAGGTGGC 57 NA Drosophila melanogaster 61 Sirt4 FBgn0029783 FBtr0070852,FBtr0070850,FBtr0070851 1 3 3 89 X 5559773 5559791 GCTGGAGGACTTTCTCCTG 59 5559501 5559519 GAACGGTAATCGGGAATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299792,FBtr0299794,FBtr0300526 2 3 6 106 X 6680838 6681139 AAACGAATCGGGTTTCGTG 59 6680750 6680768 CAATCTCCGAATTGCTGCT 58 NA Drosophila melanogaster 61 CG33691 FBgn0064122 FBtr0091671,FBtr0091672,FBtr0091673 2 3 3 60 X 6772497 6772516 GAGCTCTACAAGGCAAATCG 59 6772600 6772619 TGTAGTTGCGATCGTACTCC 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071068 2 2 3 93 X 7557580 7564936 CAAGAAAGATTCTGGACTGCC 59 7564989 7565009 GATATGTGCAATCCGATCCTC 58 NA Drosophila melanogaster 61 otu FBgn0003023 FBtr0071238,FBtr0071237 1 2 3 102 X 8381363 8381381 AAACGGAGATGTACACGTG 57 8381016 8381298 TCATACGGGACCACTATCTC 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113455,FBtr0113454,FBtr0113451 1 4 5 80 X 8404726 8406392 TCAATGGAAACGATCCCGA 59 8406434 8406454 TCGTGATGATTGAGCTTAGTG 58 NA Drosophila melanogaster 61 spirit FBgn0030051 FBtr0071231,FBtr0300731,FBtr0071230 2 3 3 60 X 8466511 8466529 AGCTGTAGCTCCAATTGTC 57 8466318 8466337 CACCTTGTTCAGTTCATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG12065 FBgn0030052 FBtr0071217,FBtr0300751,FBtr0300750,FBtr0071216 1 4 6 83 X 8478541 8478559 GGAGATCCAGTCGATCGAG 59 8478606 8479858 GATTCCTCGAGCGAAAGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 3 4 6 93 X 8917352 8918118 TGGAAGAGCCCTATACTGGA 59 8918296 8918315 CTTGTTCATGTAGTGCACGT 58 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 1 4 6 92 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918296 8918314 TTGTTCATGTAGTGCACGT 57 NA Drosophila melanogaster 61 CG7766 FBgn0030087 FBtr0071352,FBtr0114596 1 2 5 92 X 8995190 8995208 GAAAGTCACGTGATGTGGG 58 8993482 8995134 CATAGTCGATATGCTGCGG 58 NA Drosophila melanogaster 61 CG32700 FBgn0052700 FBtr0071374 3 1 2 91 X 9444527 9444545 TAAATCCCATTCGCGTTCC 58 9404689 9444475 TTGCTTACTTCACCTTTGACTG 59 NA InUTR Drosophila melanogaster 61 CG34104 FBgn0083940 FBtr0110783,FBtr0110782 1 2 2 88 X 10017163 10017183 GATTATGGAAGCAACCCACTG 59 10017233 10028018 CTCAGCGATTGTTGCAGTG 59 NA Drosophila melanogaster 61 CG34408 FBgn0085437 FBtr0114584,FBtr0114585 2 2 4 80 X 10120041 10120555 TCTACTGAGTTCGGATAATGCC 59 10120596 10120614 TTCCACGACGAGATCAGAC 59 NA Drosophila melanogaster 61 sesB FBgn0003360 FBtr0073423,FBtr0073422,FBtr0073421,FBtr0073424 2 4 4 117 X 10676326 10676423 AGTACAAGCAGGTCTTCCT 57 10676227 10676245 GGGTAGACAAAGCACAGAG 57 NA Drosophila melanogaster 61 CG15210 FBgn0040850 FBtr0073377 3 1 1 85 X 10733469 10733487 CCGAGGAGACCAAGAATGG 59 10733593 10733611 CAATGTGAAGACACCGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42683 FBgn0261569 FBtr0302838,FBtr0302839 2 2 2 80 X 11126736 11126754 TCCAACCTTATACGCCCAC 59 11120101 11126693 TGAACAAAGTCCTCGAAGCT 59 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 3 2 3 80 X 12331010 12344326 CAAATGCGAAGAATGTGACG 58 12344369 12344387 AGTTTCTGATTGACACCGC 58 NA Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 1 2 3 80 X 13170569 13176206 AATACACGATCTGCCATCAG 57 13170508 13170528 TTGAAGTCCAATGTCAGAGTG 58 NA Drosophila melanogaster 61 CG32627 FBgn0052627 FBtr0073814,FBtr0073815,FBtr0113441,FBtr0073813 2 4 4 80 X 13606930 13607025 CCATGATTAGAAGACTGATTGAGG 59 13607063 13607082 ATATGTTGTGCTTGCGTGAG 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 1 7 8 83 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665216 13665236 CCAGGCAATCAAAGAATTCCT 59 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0073833 2 1 4 86 X 13727059 13728860 AAGGAGGTGTCGGAATCTG 59 13726991 13727009 GTCATTGGGAAACTCGACG 59 NA Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 3 8 8 130 X 14825230 14825249 AGCAGATCGAGATTGAGTCG 59 14825341 14825847 GATGGTCTGACATTGCTTGG 59 NA Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 1 4 4 81 X 15230530 15230550 CTGATCATCGACTACGATGTG 58 15230592 15230664 TGGAGAAGTAAACCACCCTG 59 NA Drosophila melanogaster 61 acj6 FBgn0000028 FBtr0290063,FBtr0100326 2 2 5 93 X 15272251 15272269 TCCTATCGAAGTTCGGAGC 59 15265709 15271601 CGAAGATATCACCCTCGAGAG 59 NA Drosophila melanogaster 61 UBL3 FBgn0026076 FBtr0074174,FBtr0074175,FBtr0300787 1 3 3 86 X 15744638 15744656 CACTGGGACTTCCATTAGG 57 15744453 15744591 GTCTTTGATCTTGTGAATTGGG 58 NA Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 1 12 12 80 X 15795931 15796016 GATGCATTACAGATAATAGGTGACG 59 15796053 15796072 CAGCCAATCGTTCTTAACCG 59 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988 2 1 4 93 X 16190816 16191704 TTATGGTGCCGATTCACAC 58 16191758 16191779 TCCATTTGTGACTTTGGATACG 59 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 3 7 7 60 X 16579564 16579582 TTGATATCCACGCACATGC 58 16579426 16579444 AGTTCTCGTAGTGCACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13008 FBgn0030780 FBtr0074323 1 1 2 88 X 16606048 16607823 AAATTCAAGGCGTCAGCAG 59 16607875 16607893 GATTCCCTAGAGTGGTGGC 59 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584 3 1 3 109 X 16870573 16908970 CCAAATGGAGGAACTGGTG 58 16870482 16870503 AGATCGAGAATATGATCAGGCT 58 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 1 3 3 80 X 16870115 16870134 ATTTCTAGTCGCACCTGACC 59 16869873 16870074 TCGTATACGTGATGTCTGGAG 59 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 1 5 6 85 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173825 17173843 CTTCTTGGCCATCATCTGG 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 3 3 4 114 X 17743837 17743952 GACTTGAACAAGTCCCTGG 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 2 1 1 152 X 17778436 17778454 AGAACAGTGAGACGAACGT 59 17778732 17778752 TCTCCTCGATATCCATGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 2 2 6 68 X 17785912 17785930 AATACGATAGCATCGGGCT 58 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089661 3 1 8 122 X 17933206 17933224 TCCCAGAACAATCCATGGA 58 17847364 17933120 CAATTTGGGCAAAGACTGG 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 1 3 7 91 X 18003566 18003584 CGAAGAGTATTACGAGCGT 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 2 3 3 80 X 18027216 18027296 CATGTCATGGATTGAGGTGC 59 18027155 18027176 TACGTGTACATGAGAGTCTGAC 59 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 1 6 6 80 X 18286506 18286592 TTCATCAAACATCACCAGGT 57 18286445 18286463 ATTCAGGACATAGACACGC 57 NA Drosophila melanogaster 61 bnb FBgn0001090 FBtr0074656,FBtr0074657 1 2 4 231 X 18691376 18691394 CTAAACCAACGTTAGCCGC 59 18690127 18690145 TCGATGGTCTTGGTCTCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7378 FBgn0030976 FBtr0113004 1 1 2 80 X 18800158 18801540 CTATTATCAGTCGCCCAGC 57 18801584 18801602 ATCGAGTAGTGCAGGACTC 58 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 3 6 6 154 X 19417821 19417839 GCACAAACACGATCTGGAG 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 3 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG32529 FBgn0052529 FBtr0100839,FBtr0074800,FBtr0074801 3 3 3 80 X 19795510 19795910 GACCGTATATGGAATATCCACC 58 19795951 19795969 TATGAGGCCCAGTATGGAC 58 NA Drosophila melanogaster 61 Peritrophin-A FBgn0022770 FBtr0077335,FBtr0077336 1 2 2 148 X 20118059 20118077 CAGTTCTTCCTCTGCACCA 59 20118189 20118278 GAAATGGGAGTGGGATCCC 59 NA Nonspecific Drosophila melanogaster 61 Pbprp2 FBgn0011280 FBtr0077303,FBtr0077304 3 2 2 91 X 20291524 20291616 TGCAGATAATGGATGAATCCG 58 20291669 20291687 GTCTTCCTTCTCTGCATCG 58 NA Drosophila melanogaster 61 CG34120 FBgn0083956 FBtr0110827,FBtr0110826,FBtr0299591 1 3 3 60 X 21003757 21003776 TATTCCCATTGGAAGGAGGC 59 21003851 21003869 TTACGAATGCGTTGACCAC 58 NA DesignNoJunction Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0089679 3 2 5 195 X 21223905 21223925 AAGCGGAAGTACAACTTTACC 58 21224082 21225130 ATCATGCATATGCTGCTGG 58 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 2 4 4 89 XHet 12050 12365 GGATGATAACGATAATCGGAGAC 58 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 snmRNA:430:CR33746 FBgn0053746 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:G3:35Bd FBgn0011865 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-79 FBgn0067337 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-133 FBgn0067340 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-288 FBgn0067704 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:L3:49Fa FBgn0011909 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A982b FBgn0082942 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-33 FBgn0067683 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:157 FBgn0065105 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:V3b:90BC FBgn0012002 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31568 FBgn0051568 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-284 FBgn0067707 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:12Ec FBgn0011950 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snRNA:U5:14B FBgn0003933 FBtr0074249 1 1 1 70 X 16148124 16148144 CTGGTTTCTCTTCAATTGTCG 57 16148074 16148092 TAGAGTGTTCCTCTCCACG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17601 FBgn0031197 FBtr0077361 1 1 1 60 X 21949026 21949045 TTCACTAAGCGCATCAACTG 59 21949067 21949086 GACCCTTAGCCAGGATATCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14476 FBgn0027588 FBtr0070062,FBtr0070061,FBtr0070059,FBtr0070060,FBtr0070058 3 5 5 97 X 21473853 21474023 TAATCTATGGTCATGGAGCG 57 21473775 21473793 TACAACATTGGTCTCCGAC 57 NA Drosophila melanogaster 61 CG32521 FBgn0052521 FBtr0077236 1 1 3 83 X 21080897 21082116 AATCCGTCAGGATCGAGTC 59 21080832 21080850 GTAGGTGTTAAGCGTGGGA 59 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077275,FBtr0077273 2 2 3 61 X 20804404 20804425 AATTTGAGAATGGTCAGGATGC 59 20804274 20804382 TTTCAGAATGCCCAACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077275,FBtr0077273 1 2 3 60 X 20804404 20804424 ATTTGAGAATGGTCAGGATGC 58 20804274 20804382 TTTCAGAATGCCCAACTCG 58 NA DesignNoJunction Drosophila melanogaster 61 run FBgn0003300 FBtr0077279 2 1 1 93 X 20566420 20566850 GTAAGCAAAGCTATGGCTATCC 59 20566904 20566922 TAGCCGTAGGTCATGTACG 58 NA Drosophila melanogaster 61 RhoGAP19D FBgn0031118 FBtr0301537,FBtr0077320 3 2 2 81 X 20347079 20347097 GTGAAGCTGGAGATCAAGG 57 20346946 20347037 CAAGTTCTATCACATTGTGCTC 57 NA Drosophila melanogaster 61 CG12679 FBgn0031103 FBtr0077332 3 1 1 60 X 20247160 20247178 ACCTGGTATCCGATCAGTC 58 20247118 20247137 AACAGTGGAATCAACGACAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42581 FBgn0260871 FBtr0301573 2 1 1 60 X 19990334 19990409 TACTTACACGGAGGAGATCCA 59 19990294 19990312 AATCAGCCTCTCCATGTCC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Nep3 FBgn0031081 FBtr0070000 3 1 1 94 X 19859148 19859239 TGGATATTCCTGCAATCAATGG 59 19859294 19859312 ACTGGTTCATCTGCTCCAG 59 NA Drosophila melanogaster 61 skpC FBgn0026175 FBtr0074797 1 1 1 60 X 19710462 19710480 GATCAACCCACCTTGTTCG 58 19710504 19710522 CTAGGCCCTTGATCTCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Arp11 FBgn0031050 FBtr0074760 3 1 1 114 X 19539603 19539674 CTTCTTCAAGCATCTACTGGTC 58 19539510 19539528 GAAGTGGACAAAGAGCACG 59 NA Drosophila melanogaster 61 CG14213 FBgn0031047 FBtr0074744,FBtr0074743 3 2 2 80 X 19533358 19533378 AGTCCGCATATGAATCCTCAG 59 19533420 19533490 CCACTGGTACACCTTCTCC 59 NA Drosophila melanogaster 61 CG7406 FBgn0030980 FBtr0074664 2 1 1 159 X 18971827 18971907 ACCGACAACAATATGAAGGT 57 18972029 18972047 TGATGACCTTGACGATGGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7053 FBgn0030960 FBtr0074635 2 1 1 60 X 18686500 18686521 TAAGTTTGACTACTCCACCTCG 59 18686542 18686560 CTTCTTCATGGCGTTACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12609 FBgn0030952 FBtr0074606 3 1 2 81 X 18641980 18642091 CTGGGCAGTCATCTTAGTG 57 18641917 18641935 CTCCATCTTCCTGCTCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42323 FBgn0259223 FBtr0299775,FBtr0299776,FBtr0299774 2 3 3 90 X 18316519 18317539 CATTCAAGGTTATCCTCTCCG 58 18317591 18317609 GCACTAATCGAATAGGCCG 58 NA Drosophila melanogaster 61 upd3 FBgn0053542 FBtr0113465 1 1 1 80 X 18174207 18177440 TAGCAAACAGTTGAACCTTCG 59 18177482 18177500 TTGATGTTGCGCATGTACG 59 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 3 3 3 86 X 18095256 18095334 CAGATGGTAGGACAACAGC 57 18095383 18095402 GTTCTTGTCCATCTGATCGA 57 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300970,FBtr0300971,FBtr0300973,FBtr0300974,FBtr0300972,FBtr0300969 3 6 6 91 X 17784171 17784500 GACTCGTTGAATTTCGCCC 59 17784555 17784573 TTGATGATCGGCTGTAGGG 59 NA Nonspecific Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 2 1 1 87 X 17778491 17778673 TCAAGCCGAAACATTCAGG 58 17778724 17778742 ATCCATGTTCGACTGGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 p-cup FBgn0030840 FBtr0074437 3 1 1 88 X 17341076 17341190 CGAATTAGCCAGAAGCTAGAG 58 17341008 17341029 GCGATCTCAAACAACAAATAGG 58 NA Drosophila melanogaster 61 B-H1 FBgn0011758 FBtr0074430 1 1 1 90 X 17295718 17295870 AAACCGCAGAACCAAATGG 59 17295924 17295942 GTAAAGTCGCTGAAAGGCC 59 NA Drosophila melanogaster 61 CG18258 FBgn0030827 FBtr0074392 2 1 1 69 X 17107074 17107267 TTTGATTCTAGATGCTGCGA 57 17107298 17107317 AATAACCTCTGTGTTCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9099 FBgn0030802 FBtr0074347 2 1 1 101 X 16780257 16780364 CGATGCCCATTGAGTACTG 58 16780174 16780193 CCTCAATCTTTAGTCGCTCG 58 NA Drosophila melanogaster 61 if FBgn0001250 FBtr0301352,FBtr0074357,FBtr0301354,FBtr0301353 2 4 4 80 X 16649791 16649880 CTGAAAGTCAGCACTGTGG 58 16649729 16649750 ATTGGTGTTCGAGATAAAGACC 58 NA Drosophila melanogaster 61 sing FBgn0261245 FBtr0074318 2 1 1 113 X 16573843 16573861 GCTCATCCAGTTACATGGG 58 16573936 16574030 CATAGCCCATGTAATAGCAGG 58 NA Drosophila melanogaster 61 CG13012 FBgn0030769 FBtr0290216 1 1 1 119 X 16563465 16564097 GGACTCGATTACCAAGGTG 57 16563364 16563382 GATACCATGGACACGAGGA 58 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 1 3 3 102 X 16532325 16532446 CTTCTTGAAGAAGACTGGCA 57 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 rok FBgn0026181 FBtr0074286 1 1 1 83 X 16520823 16520907 TACGAATGCAAGAGATGCC 58 16520758 16520776 GTGATTGAGCTTACAGGGC 58 NA Drosophila melanogaster 61 CG12507 FBgn0030729 FBtr0290087 2 1 1 88 X 16159850 16160070 GCTACGACAGATATGATGAGC 58 16159782 16159800 ATACGGATCGAAACGTTGC 58 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 3 4 4 87 X 15769161 15769180 CAGCTAGATTTAGGCGATGG 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 CG15914 FBgn0030700 FBtr0074105 1 1 1 84 X 15747911 15747982 ATACTCTCCTGTCTTGCCG 58 15748028 15748048 GAAAGGGCTGAACATTATCCA 58 NA Drosophila melanogaster 61 Graf FBgn0030685 FBtr0074196,FBtr0074195,FBtr0074198,FBtr0074199,FBtr0074194,FBtr0074197 1 6 6 80 X 15646355 15646435 ATAACCAATGTTCGTTACTCCC 58 15646296 15646314 GTTCTCCGGAATGAGTCCT 58 NA Drosophila melanogaster 61 CG11679 FBgn0030678 FBtr0074202 1 1 1 60 X 15632134 15632155 GAATGGCAAGTTCTTTGTTACC 58 15632095 15632116 GGAGAAGGTGTACTTATACAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ahcy13 FBgn0014455 FBtr0074030 3 1 1 173 X 15344731 15344749 GGCGATCATTATTGCGGAG 59 15344886 15345441 CTGGACCATTGGACCTGAG 59 NA Drosophila melanogaster 61 CG12608 FBgn0030630 FBtr0074018 3 1 1 88 X 15237684 15237702 CCTTCATTCTTGCACACGA 58 15237520 15237632 TTTGATTTCACCAGCGCTG 59 NA Drosophila melanogaster 61 CG32588 FBgn0052588 FBtr0074025 3 1 1 120 X 15100113 15100212 CCATTGTATTTATCACTCCGCA 59 15100014 15100032 TCCAGAGGCATCAATCCAC 59 NA Drosophila melanogaster 61 CG15029 FBgn0030619 FBtr0073998 3 1 1 137 X 15079081 15079100 TAATGCCTCCTCTATTGGCG 59 15079200 15080332 TTTCGTGAAATGTCGTGCC 59 NA Drosophila melanogaster 61 CG33178 FBgn0053178 FBtr0073963 2 1 1 110 X 14977066 14977302 CGGTATAAGATCTTTCCCAACC 58 14977524 14977542 CTCCATGTCATTGCGATGG 59 NA Drosophila melanogaster 61 mRpS25 FBgn0030572 FBtr0073945 2 1 1 60 X 14476800 14476819 CACATATGGTGCTCATCACG 59 14476696 14476714 GATCTGCGGTATGTTCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9411 FBgn0030569 FBtr0073916 3 1 1 85 X 14368724 14368742 AATGTGATCACCGGACCAG 59 14368582 14368602 TTGGAATACGAATCATCCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11134 FBgn0030518 FBtr0073818 1 1 1 100 X 13632395 13632479 GAGCATTAAGTACAACGATGAG 57 13632540 13632558 CCTTGCCGGTTATATCCTG 57 NA Drosophila melanogaster 61 CG1662 FBgn0030481 FBtr0073776 2 1 1 69 X 13282524 13282542 CATCAGTGCCTTCTTCGTC 58 13282575 13282593 GATCTCCTCCCACACTTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpL49 FBgn0030433 FBtr0073691 3 1 1 165 X 12801265 12801348 AAAGCTAAGCCAGCTTACCA 59 12801476 12801494 TACTGTCTTCGCTGGTAGC 59 NA Drosophila melanogaster 61 CG32649 FBgn0052649 FBtr0073697 2 1 1 82 X 12793482 12793568 GTTTCGATCTGAGCTACGAG 58 12793419 12793437 CTCAATCTCGAAGAGCTCG 57 NA Drosophila melanogaster 61 CG4004 FBgn0030418 FBtr0073686 1 1 2 96 X 12638895 12638913 TTTCCTCAAGCCGGTACTC 59 12638972 12640910 GTCAACATCCTGAATGCTGG 59 NA Drosophila melanogaster 61 CG2556 FBgn0030396 FBtr0073652 2 1 1 90 X 12409792 12409867 TAGGAATGGAAACGAGCAG 57 12409921 12409939 ATTGCTGATTCCATTGGCT 57 NA DesignRelaxed Drosophila melanogaster 61 CG15741 FBgn0030338 FBtr0073606 2 1 1 60 X 11732018 11732036 TCCTCTGCGTACTGATCCT 59 11731976 11731999 GAAGTAGATGAAGTTGAACTAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32663 FBgn0052663 FBtr0073563 1 1 1 80 X 11720807 11720902 ATCTGGATCGTACAGCAGC 59 11720943 11720964 CCATAATCCGAATCCAAGTGAC 59 NA Drosophila melanogaster 61 CG1561 FBgn0030317 FBtr0073539,FBtr0073538 2 2 2 101 X 11476639 11476657 CTCTTCACTTGCACTTCGC 59 11476497 11476575 CTCGCCTAGTCTAATCAGCT 58 NA Drosophila melanogaster 61 sev FBgn0003366 FBtr0073393 3 1 1 92 X 10972709 10972729 GGTTTAACTTAGCCGATTACG 57 10972571 10972657 CAAATCGGAACCTGTATTGTG 57 NA Drosophila melanogaster 61 CG2202 FBgn0030240 FBtr0073380 1 1 1 85 X 10745600 10745618 GAGCCAACTTTACACCCAC 58 10745667 10745748 CATGAGATGCGCCATAACG 59 NA Drosophila melanogaster 61 CG15211 FBgn0030234 FBtr0112977,FBtr0073376,FBtr0112975,FBtr0112976 2 4 4 136 X 10672154 10672255 TATTCTCGGAGCTGATCACC 59 10672354 10672372 GAAGAGTCCAAAGACACCG 58 NA Drosophila melanogaster 61 CG15295 FBgn0030220 FBtr0071508 2 1 1 65 X 10512442 10512460 AGTAGCGGTAATCCAGCAG 59 10512395 10512413 GAAAGCACTGAAGTCAGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32681 FBgn0052681 FBtr0071466 1 1 1 60 X 10272584 10272602 GCCGTATTCCTCAAATCCC 58 10272542 10272560 TGATCCTTTGGGTGATGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15307 FBgn0030192 FBtr0071442 1 1 1 80 X 10238024 10238043 GGCGTAACTACGATATGCAG 58 10238085 10240896 GCGACGATCGGTAATTAAGC 59 NA Drosophila melanogaster 61 Gga FBgn0030141 FBtr0071363 2 1 1 95 X 9496623 9496641 CGAGCTATACAAGAGCTGC 58 9496700 9496787 AGAGTGTCAGCTACAAGCT 58 NA Drosophila melanogaster 61 c12.2 FBgn0040234 FBtr0071321 3 1 1 80 X 9217738 9217810 CGATGTACAGGTTCAATGGT 58 9217853 9217871 CCTCAAAGGCTTCCATCAC 58 NA Drosophila melanogaster 61 AP-1gamma FBgn0030089 FBtr0071296,FBtr0112965,FBtr0071294,FBtr0071298,FBtr0071295,FBtr0071297 2 6 6 82 X 9007919 9008012 ATCATGGACATACGCTCGG 59 9008058 9008076 TTCTTGTCCGAGTTGAGCA 59 NA Drosophila melanogaster 61 CG7033 FBgn0030086 FBtr0071291,FBtr0071289 2 2 2 93 X 8985203 8985454 CACAGCGTATTGAGAATGCC 59 8985510 8985528 GAATCGACCTTGATGCTGC 59 NA Drosophila melanogaster 61 CG32708 FBgn0052708 FBtr0071286 1 1 1 174 X 8980337 8980433 CAGAGAAGCTGTCAAGTGC 58 8980568 8980589 CATAGCGAGTCATAGAATTGGG 58 NA Drosophila melanogaster 61 CG15366 FBgn0030080 FBtr0071355 1 1 1 70 X 8967114 8967132 CAAGCGCCTCGATATACTC 58 8967062 8967080 CAAGGATAATGGTGCCAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ogg1 FBgn0027864 FBtr0071223 1 1 1 80 X 8584595 8584614 TGTCATAGGCTTATCCCTCG 58 8584657 8584733 CATATGGATCGCCATCGGA 59 NA Drosophila melanogaster 61 CG32712 FBgn0052712 FBtr0300386 2 1 1 101 X 8327495 8327513 TGTTCACGCTGCTCTACTC 59 8327359 8327430 TCAGCATCATCGCATTGGA 59 NA Drosophila melanogaster 61 CG1444 FBgn0029975 FBtr0071091 1 1 1 114 X 7805124 7805142 TCTACCCGGCATGATTAGC 59 7805220 7805296 GTTCACAAAGGCCTTGGTG 59 NA Drosophila melanogaster 61 ct FBgn0004198 FBtr0114613,FBtr0071069 3 2 3 182 X 7526813 7539816 CTCTCATTCAGAATTCCGCG 59 7539961 7539979 TCGATGTCGTTTGTTGCTG 59 NA InUTR Drosophila melanogaster 61 CG9657 FBgn0029950 FBtr0071057 2 1 1 83 X 7312984 7313818 CACTGATATCCAGCTTTATATCTGG 59 7313858 7313877 TGTACATGTACTGAGCACCA 58 NA Drosophila melanogaster 61 CG14425 FBgn0029933 FBtr0100572,FBtr0300771 1 2 2 81 X 6979497 6979515 CACATCGGAAATGGACTCG 58 6979364 6979453 ATAGGAAACCTTAAGCCGCT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 2 3 3 215 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616524 6616542 CAGAAAGATACGCCACGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32751 FBgn0052751 FBtr0070880 3 1 1 84 X 6091017 6091038 TACCCTGCTCGATAATCTTCTG 59 6090901 6090972 CACTTGGTGACTCTCCTCG 59 NA Drosophila melanogaster 61 CG12239 FBgn0029810 FBtr0070814 2 1 1 269 X 5687915 5687935 AGAGCGAGATAATCAAAGGGA 58 5688166 5688245 AGTGCATGACCAAATCCCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG3097 FBgn0029804 FBtr0070836 3 1 1 97 X 5661171 5661189 GAGATCCGCACCAAATTCC 59 5660887 5661112 GGATTCTCCGAGATTCTAAGC 58 NA Drosophila melanogaster 61 CG34434 FBgn0250904 FBtr0112735 2 1 1 164 X 5510100 5510118 AAGAACGGAATGCTGAAGC 58 5509828 5509973 CTCGACGTTTGTGTTCTTGG 59 NA Drosophila melanogaster 61 Cdk7 FBgn0015617 FBtr0070756 3 1 1 108 X 5202772 5202862 GTTTGCCACAGTTTACAAGG 57 5202683 5202701 TGTCCTGTTGATACCGTCG 59 NA DesignNoJunction Drosophila melanogaster 61 mei-9 FBgn0002707 FBtr0070656 2 1 1 92 X 4211061 4211079 CAACTGGATTGCATCTGGC 59 4210927 4211008 CATGGTGGAGATCATTAAGCTG 59 NA Drosophila melanogaster 61 CG4857 FBgn0026083 FBtr0070643,FBtr0301122,FBtr0300931,FBtr0301123,FBtr0301124 1 5 5 80 X 4015894 4015912 GAAGATTGGACGCATGGTC 59 4015955 4016107 TCTAGCTGTCGAGTAGTCGT 59 NA Drosophila melanogaster 61 CG2941 FBgn0029686 FBtr0070613 2 1 1 173 X 3830965 3831036 CTGGAGTGGAAACGATGAG 58 3831172 3831191 CACTGGATATCATCGTGTGC 58 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301823,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 1 7 7 85 X 3593289 3593375 GCCCACAAATATGTCAATTCCT 59 3593421 3593439 AGCTCGATCTTCTGCTTGG 59 NA Drosophila melanogaster 61 Csat FBgn0024994 FBtr0273276,FBtr0070501 2 2 2 143 X 2597412 2597433 CAATACGCTGAAGTACATCAGC 59 2596778 2596796 ATCAGTTTGGCGAACTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 97 X 2567051 2567069 GTTCTTCGATGAGCTACGC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 CG12496 FBgn0040385 FBtr0070462 2 1 1 63 X 2304402 2304420 ATATTGTAGGCTCGGGTGC 59 2304357 2304375 ACAAAGTCCTCGTCCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14053 FBgn0029603 FBtr0070424 1 1 1 60 X 2086819 2086839 CTACTTCGATTTGCTGGAGAC 58 2086779 2086797 CTTTCCGCTGTAAACACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 deltaCOP FBgn0028969 FBtr0070371,FBtr0301926 3 2 2 112 X 1754005 1754097 GCTGACCATTAACTGCTGG 58 1753911 1753929 GAATGACAATGGCCACGTC 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 3 6 6 81 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284357 1284375 TGTCGCTAATTGTCTCCGA 58 NA Nonspecific Drosophila melanogaster 61 A3-3 FBgn0028550 FBtr0070244 3 1 1 149 X 1146119 1154001 GCATTTATTGATTCGATGCCG 58 1145990 1146008 CGGCAGAGGAGTAAGATCG 59 NA InUTR Drosophila melanogaster 61 A3-3 FBgn0028550 FBtr0070244 1 1 1 146 X 1146119 1154001 GCATTTATTGATTCGATGCCG 58 1145993 1146013 CAGAGGAGTAAGATCGATCCA 58 NA InUTR Drosophila melanogaster 61 CG14625 FBgn0040358 FBtr0070202 1 1 1 80 X 1094814 1094832 GACGATCGTGGTTACTCCA 59 1094875 1094974 GCCAAAGCTGTAATCTTTGC 58 NA Drosophila melanogaster 61 TRAM FBgn0040340 FBtr0070169 2 1 3 126 X 830261 830279 GGCTACTACAGATGCTCCC 59 830438 830456 GATCACAAACTCGTGGCTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070123,FBtr0100530,FBtr0070124,FBtr0070126,FBtr0070127,FBtr0070125,FBtr0070129 2 8 8 60 X 551172 551191 TGAGGAGATCTTTGACACGG 59 551214 551232 CATGGTCTTGATAGTGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17778 FBgn0023534 FBtr0070080 2 1 1 204 X 389049 389068 CTTACTGTCATGCCAAGAGG 58 389586 389604 CCTCCATCTCGTCCATCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RhoGAP1A FBgn0025836 FBtr0302200,FBtr0112920,FBtr0112919 1 3 3 82 X 30937 31026 CGATTTCTTCCTTCAGCAAGG 59 31070 31088 GTAATATGGGCGGACCCTC 59 NA Drosophila melanogaster 61 CG42623 FBgn0261338 FBtr0302254 1 1 1 81 U 383638 383656 TCCAACGTCGCATATACAC 57 383698 398749 CATGTATTTACAGAGTTCCCGA 58 NA Drosophila melanogaster 61 Rfabg FBgn0087002 FBtr0089188 3 1 1 102 4 1093996 1094071 TATTGATGGCATACGCACC 58 1094137 1094155 AACAATGGACTTCTGAGCC 57 NA Drosophila melanogaster 61 mGluRA FBgn0019985 FBtr0089184 3 1 1 80 4 964871 964941 CTCTGATCGCAATACAGGT 57 964983 965003 GGTCTGGGTAATAGAATCGAG 57 NA Drosophila melanogaster 61 CG2052 FBgn0039905 FBtr0089129,FBtr0089128 1 2 2 80 4 407604 411064 CCAATGAAATTCAGCTTCAGC 58 407544 407563 TTGACCAACATTCTTCGAGG 58 NA Drosophila melanogaster 61 CR33294 FBgn0053294 FBtr0113460 1 1 1 82 3R 19979 19999 CCCATATTCATGAAAGGAGCG 59 20043 20127 AAGCAAATGTGCGAATCGG 59 NA Drosophila melanogaster 61 tRNA:CR31334 FBgn0051334 FBtr0083976 1 1 1 60 3R 16716849 16716868 TTTAGCTCAGTGGTAGAGCG 59 16716891 16716909 CTGTGAGGGTTGAACTCAC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U1:95Cb FBgn0004186 FBtr0084488 1 1 1 75 3R 19653612 19653630 TTAACCGTGATCACGAAGG 57 19653669 19653687 ATCGCAGAGGTCAACTCAG 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 zwilch FBgn0061476 FBtr0085777 1 1 1 80 3R 27037399 27037420 AGTTGTTTCAGATTCACTGCAC 59 27037279 27037361 CATCGTTGTAAACATTTGCCAG 59 NA Drosophila melanogaster 61 CG33773 FBgn0053773 FBtr0091774 2 1 1 99 3R 26861294 26861315 TGAGAACTGCAACTTAAAGTCC 59 26861372 26861462 GAAATTTACCTTCATCCTCGGC 59 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302606,FBtr0085674,FBtr0085678,FBtr0302313,FBtr0085673,FBtr0302605,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 3 13 13 85 3R 26419131 26419218 TCGATGAGATCGTTGTAACC 57 26419065 26419083 AATGGAGATGTCGATCGTC 57 NA Drosophila melanogaster 61 CG31025 FBgn0051025 FBtr0085587 1 1 2 95 3R 25953955 25953973 AATGTGGAGCTAACCTGCA 59 25953812 25953896 GACCGCATCTTCTTTGAGG 58 NA Drosophila melanogaster 61 ca FBgn0000247 FBtr0085484 3 1 1 80 3R 25634117 25634199 GTTATGCTGCTGATAACTTCC 57 25634239 25634259 GGGATAGACGTATTTGATTGC 57 NA Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 2 1 1 183 3R 24973600 24973689 GAAGACGTCTTTGTGAAGCC 59 24973436 24973454 GTCCAATGAACAGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11877 FBgn0039636 FBtr0085370 2 1 1 73 3R 24943547 24943565 ATGCACCACTCATGAAGTC 57 24943602 24943682 GTCCTCTGACTCCGATTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Cul-5 FBgn0039632 FBtr0085417 1 1 1 80 3R 24886258 24886337 CCACAGAACTACCAGATCCC 59 24886197 24886221 GCAGGATCTGTTTCTTTATCTTAGG 59 NA Drosophila melanogaster 61 Slu7 FBgn0039626 FBtr0085418 3 1 1 87 3R 24863512 24863597 GAACAGTTCAAGTCAAGTACCA 58 24863446 24863464 GCAATAGCGACTTTGGTGG 59 NA Drosophila melanogaster 61 inx3 FBgn0028373 FBtr0085350 1 1 1 80 3R 24680599 24680681 TACATCTTCCTGTGGTTCTGG 59 24680539 24680562 CATGATAACCACCAGTGAATAGAG 59 NA Drosophila melanogaster 61 CG1523 FBgn0039601 FBtr0085355 3 1 1 60 3R 24644524 24644542 AAGATCTGTGCGGATTCAG 57 24644356 24644375 ATATACTGTTCGCCCAACTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG12516 FBgn0039577 FBtr0301672 1 1 1 60 3R 24129804 24129827 CTGATGAAGATTGACGAACTTAGG 59 24129767 24129787 GTAAGACACGATCTGAAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4849 FBgn0039566 FBtr0085257 1 1 1 88 3R 23790243 23790322 CATAAACAAGATTGATCGCCTC 58 23790371 23790389 TGACTTCCTCCACAATGTG 57 NA Drosophila melanogaster 61 btz FBgn0045862 FBtr0085220 2 1 2 80 3R 23526239 23526330 AATTCGCACAAGAAGCAGC 59 23526374 23526392 GTTGGTTTCTCCACTTCGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG12883 FBgn0039538 FBtr0085216 1 1 1 86 3R 23505142 23505231 GTTCGAGCAAGAACAAGACC 59 23505280 23505298 CATAGATCCTCCGCACCTC 59 NA Drosophila melanogaster 61 CG5612 FBgn0039529 FBtr0085200 3 1 1 80 3R 23449691 23449781 TTGCTATACTCGATCACTATGC 58 23449632 23449652 TATAGTGACTGTACTCTGCCA 57 NA Drosophila melanogaster 61 His2Av FBgn0001197 FBtr0085062 3 1 1 70 3R 22693482 22693500 TATTGGAATACCTGACCGC 57 22694106 22694125 ACGTTTCACTTTCAAGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085060 3 1 2 76 3R 22652406 22653007 AGTTCTGAGCAAGGAGGAG 58 22653046 22653065 TTTCCTTATGCAACACAGCG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14247 FBgn0039454 FBtr0085043 3 1 1 66 3R 22563954 22563973 CTGTGTCCCAGCATAAATGC 59 22564002 22564020 TGGACACGAATCCACTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6425 FBgn0039449 FBtr0085047 3 1 1 81 3R 22542945 22542964 GATCTTTAACGCTCAGCACG 59 22542824 22542842 CTTACATTGTGCCCTGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14544 FBgn0039407 FBtr0084969 3 1 1 141 3R 21885469 21885541 AAATATCATCGGCGTGGAG 57 21885643 21885664 AATCATACTAATATCCGGCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983 3 1 2 86 3R 21751612 21766986 TTTATGAGACCGAACAGTTTGC 59 21751547 21751567 TGAACATCACGAACAGAACAG 59 NA Drosophila melanogaster 61 CG17770 FBgn0039374 FBtr0084903 1 1 1 60 3R 21637778 21637797 AACAGGTCAAGGATTTGGAG 57 21637817 21637838 ATAACCTTAGTGTCTTGGTCGT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113386,FBtr0113387,FBtr0113384,FBtr0084928,FBtr0113388,FBtr0113385,FBtr0084927 1 7 7 80 3R 21527166 21527254 TAGCAAGCGTCATCTATGTC 57 21527105 21527123 TGTGGTAGACGGGATTCTC 58 NA Drosophila melanogaster 61 CG31099 FBgn0051099 FBtr0084856 2 1 1 88 3R 21135664 21135744 CAAATATGGATCTCCTGCCA 57 21135595 21135614 CCATATTGTCAAACTGGGCT 58 NA Drosophila melanogaster 61 CG31109 FBgn0051109 FBtr0084791 1 1 1 81 3R 20880122 20880143 ATTTATAGTGATCATGGCCAGC 58 20879886 20880086 GATCAGTCGGAGATATTGTAATTGG 59 NA Drosophila melanogaster 61 CG7016 FBgn0039238 FBtr0084707 2 1 1 60 3R 20689442 20689463 ATCCAGATAATGAGTCTAGCAC 57 20689484 20689502 GTTGGAAAGATGGGTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13617 FBgn0039201 FBtr0084641 2 1 1 80 3R 20343030 20343105 GAAGAATCATCAAGAGCCCTC 58 20343147 20343165 CGTGAGACATCAACTTCCG 58 NA Drosophila melanogaster 61 CG18669 FBgn0040599 FBtr0113329 3 1 1 86 3R 20193156 20193174 CAAGATGGATTCCTGGGTC 57 20192823 20193108 TGACGTGATTTGACTCATCAG 58 NA Drosophila melanogaster 61 Acp95EF FBgn0002863 FBtr0084561 3 1 1 63 3R 20054704 20054723 GGATATCAACATGGCCTCAG 58 20054810 20054829 AAGGGATAGAGCTACAACCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13604 FBgn0039137 FBtr0113275,FBtr0113276,FBtr0113277,FBtr0084509 3 4 4 82 3R 19816490 19816508 CATTAACTTCCGCCGAGGA 59 19816364 19816444 ATGTGCTGTGTTCTGACGA 59 NA Drosophila melanogaster 61 CG31414 FBgn0051414 FBtr0113405 2 1 1 81 3R 19530757 19530777 CACCTACTGCGATTATCTGGA 59 19530820 19531080 TAAGCCATCCTTGCTGGAG 59 NA Drosophila melanogaster 61 CG10183 FBgn0039093 FBtr0273191 2 1 1 94 3R 19422601 19422620 ATTCCGTCTTCATTTGGCAC 59 19422469 19422545 GTTGAGCATCACAGTGTAGG 58 NA Drosophila melanogaster 61 CG4393 FBgn0039075 FBtr0301085 3 1 1 80 3R 19204044 19204063 ATCTTAGGACCACCGAATGG 59 19203863 19204001 AGCCGAGGTATTGAACCTC 59 NA Drosophila melanogaster 61 CG17625 FBgn0039002 FBtr0084301 1 1 1 60 3R 18512895 18512915 GTTGTTTGCTTCGCTAAAGTG 59 18512934 18512955 ATATGGAACAGGTGTTTCTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AP-50 FBgn0024832 FBtr0301866 1 1 3 121 3R 18289735 18289753 CAGTGGCTTGTATGAGACG 58 18289837 18289905 TTGCTGGAACAATAGATGCG 59 NA InUTR Drosophila melanogaster 61 CG34288 FBgn0085317 FBtr0300623 1 1 1 125 3R 18272942 18272965 CCGAGAATCAGTAAAGAGTATACC 58 18272775 18272793 AGAAATCGGGAATTCTGGC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7069 FBgn0038952 FBtr0084215 1 1 1 80 3R 18198668 18198686 CCATATGTTCCACTTGCCT 57 18198730 18198800 ACTTCGGTGGTTTCTTCTC 57 NA InUTR Drosophila melanogaster 61 CG5388 FBgn0038944 FBtr0084241 2 1 1 113 3R 18165951 18165969 GAAGTTCGCAGTAGGTCCT 59 18163322 18163340 CTCACTTCAACAGGAGGCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13862 FBgn0038942 FBtr0084204 2 1 1 76 3R 18157796 18157893 TTTGTGGTGATGATGCTCG 58 18157933 18157951 GGCTGGTCATAAAGGTAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Ir94c FBgn0051423 FBtr0084248 3 1 1 120 3R 17945107 17945530 CTGGATTGGAAGCAAGAACC 59 17945006 17945024 ATGGCAGTATTCATCCCGA 58 NA Drosophila melanogaster 61 CG17843 FBgn0038919 FBtr0084150 3 1 1 60 3R 17740250 17740272 AGTATCTTACACCATCTTCGGAC 59 17740290 17740310 AGGAAGTCTCCAATAGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17843 FBgn0038919 FBtr0084150 1 1 1 60 3R 17740320 17740340 CAATATTCAGCCAGATCCACC 58 17740359 17740380 CAGAAACTCAGTAAAGTTTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7056 FBgn0038852 FBtr0084037 1 1 1 87 3R 16903112 16905928 ATGGACTGCGAAGGATTCC 59 16903043 16903061 TCGACATGTAGAAGCTGGC 59 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0300191,FBtr0089515,FBtr0089514,FBtr0089509,FBtr0089512,FBtr0089516,FBtr0089511 1 9 9 90 3R 16799384 16799402 GTCTTTGAAACCGTGCTGG 59 16799456 16799546 ACCACCAGACGAGTTTCAG 59 NA Drosophila melanogaster 61 cdc2c FBgn0004107 FBtr0300447,FBtr0083921,FBtr0083922 3 3 3 82 3R 16562582 16562600 GTTCCCTAGATGGGAGGGA 59 16562643 16562719 AGCACAGCATTGACATTATGAG 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 3 5 5 84 3R 16396364 16396823 GTCGACAGGTAAATCCTCTG 57 16396870 16396888 ACGTTGTCTATCTCCCGAG 58 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487,FBtr0100457,FBtr0089484 2 5 5 80 3R 16366166 16366255 CATAATGTCAGAGATCCAGTCG 58 16366107 16366126 GATGATTGACCGGATAGGCT 59 NA Drosophila melanogaster 61 Ir92a FBgn0038789 FBtr0113253 3 1 1 80 3R 16165156 16165177 ATAAGCGGTATTTGTTCCTGTG 59 16165218 16165870 GGTGAGGGTAGAACTGCAG 59 NA Drosophila melanogaster 61 mira FBgn0021776 FBtr0083848 2 1 2 196 3R 15758701 15758719 GAGCTATCTGGTGTTGCAG 58 15758433 15758451 TCATGTCCACCATGTAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 vib FBgn0260992 FBtr0083745 1 1 1 80 3R 15044175 15044193 TAGTGCACATCGACATTGC 58 15044050 15044131 TTGACTGGTAGGTGGTTGG 59 NA Drosophila melanogaster 61 CG5555 FBgn0038686 FBtr0083746 3 1 1 82 3R 15005244 15005265 TGCAGAGATTAAACACATCCAG 58 15005116 15005202 ATTCATTCGAGCGGAATTCC 58 NA Drosophila melanogaster 61 CG14294 FBgn0038656 FBtr0083726 3 1 1 60 3R 14727639 14727658 AAACGACCAAATGCATCGAG 59 14727598 14727618 CAGTCCTTAAACGTTTGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14302 FBgn0038647 FBtr0083673 1 1 1 134 3R 14558427 14558521 CATGAAATTCTTCAACCTGCTG 58 14558616 14558634 CTAGTCGTACCATCGACGG 59 NA InUTR Drosophila melanogaster 61 CG7705 FBgn0038639 FBtr0083688 3 1 2 81 3R 14502657 14502677 CTGCATCCGTCGAAATATGAC 59 14502538 14502619 CTCAATTTGACGGGATTCTATGAG 59 NA Drosophila melanogaster 61 CG7678 FBgn0038613 FBtr0083658 3 1 1 138 3R 14215159 14215296 TTCCGTGATTTGAATGCGA 58 14215039 14215057 TTAGATCGAGCACCTTGTG 57 NA Drosophila melanogaster 61 CG31235 FBgn0051235 FBtr0083588 3 1 1 111 3R 14143196 14143348 CGAGTACTTCAATGATTGCGA 58 14143105 14143123 CTTGGTAACGCTTTCGAGG 59 NA Drosophila melanogaster 61 CG14313 FBgn0038579 FBtr0083615 3 1 1 113 3R 14017262 14017280 CATCAGCTTCTGCGATCTG 58 14017095 14017113 TAGTTCATAGACTCCGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 Cbp20 FBgn0022943 FBtr0083551 2 1 1 80 3R 13990701 13990719 TATAAGAAGACGCCCTGCG 59 13990762 13990905 ATTCACAAATCTCATGGCCG 59 NA Drosophila melanogaster 61 Prx5037 FBgn0038519 FBtr0083503 3 1 1 81 3R 13371562 13371639 CTAGATTTCACATTCGTTTGCC 58 13371502 13371521 CCTCGGTGTTAATGTCATGG 58 NA Drosophila melanogaster 61 Brf FBgn0038499 FBtr0302317,FBtr0083452 1 2 2 80 3R 13216263 13216281 TATGAGCTTGGTCGTACCT 57 13202972 13216220 GATGTATAAACACGGGTCCA 57 NA Drosophila melanogaster 61 CG31267 FBgn0051267 FBtr0083404 3 1 1 91 3R 12960059 12960079 AAATTTAGCTCCCGAATCGTC 58 12960132 12960316 AAGTGGTTACCATAGGCGT 58 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0083333,FBtr0083332,FBtr0112803,FBtr0300037,FBtr0300036,FBtr0083334 2 6 6 81 3R 12457644 12457662 TCTTTGTGAACAATGCCCG 59 12457707 12457799 ATGATGTGCATGATCTGCC 58 NA Drosophila melanogaster 61 Scp2 FBgn0020907 FBtr0083361 2 1 1 109 3R 12401112 12402658 ACAACGATGGACAGGTCAG 59 12401021 12401042 GAACATGAAGTTCATGTAGGCA 59 NA Drosophila melanogaster 61 CG14903 FBgn0038446 FBtr0083303 3 1 1 87 3R 12399311 12399329 CACTTGAATTCCGAGGACG 58 12399110 12399260 TCTCATCTTTGGCCTCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG10405 FBgn0038431 FBtr0110773 2 1 1 94 3R 12280892 12281215 GTCACCGAAGCAATGTTCTG 59 12281345 12281363 CCGATAAGGGTTCCCTGTG 59 NA Drosophila melanogaster 61 srp FBgn0003507 FBtr0083216,FBtr0083215,FBtr0100595 3 3 3 89 3R 11827968 11827986 TGGAAAGTGGTTCATTGGT 57 11828036 11828140 GTGGTTTCATATCGTCATTGAC 57 NA Drosophila melanogaster 61 CG4287 FBgn0038388 FBtr0301716 3 1 2 94 3R 11789257 11789333 TCACTATCAATCGCCATGGA 59 11789182 11789200 TTGGTTAGTGCTTGCATGG 58 NA InUTR Drosophila melanogaster 61 Acyp2 FBgn0038363 FBtr0083174 1 1 1 161 3R 11618603 11618621 AGATCTTTGGACGAGTGCA 59 11618867 11618945 CCAGCCAATGTTTCATTTCCA 59 NA Nonspecific Drosophila melanogaster 61 CG6194 FBgn0038325 FBtr0083115 1 1 1 81 3R 11181062 11181149 TTGCTTAAACACGCCTTAGAG 59 11181001 11181022 TGCAATCTTTGGCTACATAGAC 58 NA Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963,FBtr0089962,FBtr0089961,FBtr0089965 1 4 13 94 3R 11115129 11115148 CTGCACAACATCATGAACAC 58 11120878 11120896 CGCTCCAAGTCTTCTTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG6499 FBgn0038309 FBtr0113238 1 1 1 90 3R 11073838 11073911 ACCAGCTCCATCTATTCCT 57 11073766 11073784 TAATGGACACTAGGGAGCC 58 NA Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083060,FBtr0083057,FBtr0083059,FBtr0083056,FBtr0083058,FBtr0083055 1 6 6 60 3R 11071758 11071777 GACCAAGATCTCGGACTCTG 59 11071800 11071818 CTTGATGGTCTCGTTGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70-4 FBgn0001219 FBtr0083058 3 1 6 117 3R 11068895 11070094 TCGGTTGAATGTCTAAAGCTC 58 11070173 11070191 GTACGATTACCCTGGTCGT 58 NA InUTR Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049,FBtr0083050 1 2 2 80 3R 11040072 11040153 TAGACAACGATACTGATCAGGC 59 11040194 11040212 CGAAGAAGTACCGTCCCTG 59 NA Drosophila melanogaster 61 CG6687 FBgn0038299 FBtr0083140 1 1 1 104 3R 11032914 11032932 AAGAAATGGTTCGAACGGG 58 11032766 11032848 TCCCATTAAGCTGAGGATAGG 58 NA Drosophila melanogaster 61 CG33332 FBgn0067629 FBtr0082999 2 1 1 105 3R 10714398 10714416 GAGAGGAGTCCCTAGTGGA 59 10714545 10714563 AAAGGTCTTCGTTCTGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 btsz FBgn0053555 FBtr0113468,FBtr0091531,FBtr0091532,FBtr0273199,FBtr0091530,FBtr0273198,FBtr0273200 3 7 7 88 3R 10634007 10634092 ACGTTAAGGTGTATCTACTGC 57 10633939 10633957 GTCGAAGATGGGATTCAGC 58 NA Drosophila melanogaster 61 CG7886 FBgn0038248 FBtr0082976 2 1 1 80 3R 10455251 10455348 TCCACAAACCAACATTGATCC 59 10455191 10455211 AAGCGAGTATAGATCACTGGC 59 NA Drosophila melanogaster 61 CG8066 FBgn0038243 FBtr0082981 1 1 1 125 3R 10394484 10394502 CAACGTTCCAATTGTAGGC 57 10394313 10394395 TTAAGTGCCTTGTAGCTGG 57 NA Drosophila melanogaster 61 Aats-met FBgn0027083 FBtr0082895 1 1 1 84 3R 10085584 10085604 TCAGATATTTGGGAACTCGCT 59 10085454 10085538 TGTCCAATGTGAGGAGCTG 59 NA Drosophila melanogaster 61 Sp212 FBgn0053329 FBtr0300406 2 1 1 144 3R 10048587 10048607 TATGATCTGGATGACTACGGA 57 10048245 10048481 TGTCGTTAAACGTCACTGG 58 NA Drosophila melanogaster 61 CG14355 FBgn0038208 FBtr0082907 2 1 1 87 3R 9976931 9977031 TCATGTGCATTGCTGATGAG 59 9976863 9976887 CCCATTACGAACATAATATCCTGTG 59 NA Drosophila melanogaster 61 CG3061 FBgn0038195 FBtr0082869 3 1 1 80 3R 9859633 9859719 GGATCGAGAAGGTAACAACTC 58 9859761 9859779 GACGACATCATGGAGAGTC 57 NA Drosophila melanogaster 61 E5 FBgn0008646 FBtr0082880 2 1 1 219 3R 9699055 9699073 TATCCATGGTTGCTCAGCC 59 9693747 9694330 AAACCTTAACCTGCGTTTCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG14362 FBgn0038186 FBtr0082881 3 1 1 80 3R 9681129 9681147 TTCTCCTCGTATCCCTCAG 57 9681011 9681089 CTTGATCTGACTACGACTTAGTG 58 NA Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 1 2 2 80 3R 9600882 9600961 ATAAATCACGAGGATGAAGACC 58 9601001 9601020 TACTTTGCCATCTCCATCCA 58 NA Drosophila melanogaster 61 Paip2 FBgn0038100 FBtr0082693 2 1 1 167 3R 8809598 8809679 ACAAGAACGAACTGCAACG 59 8809872 8809891 TTTCAACATCACACTGGCTC 58 NA Drosophila melanogaster 61 Past1 FBgn0016693 FBtr0082655,FBtr0082654 1 2 2 122 3R 8529519 8529600 AAGATATCCGGTGCAACTG 57 8529686 8529704 GAACTCGTCAGAGTCCAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14394 FBgn0038079 FBtr0113227,FBtr0113226,FBtr0113228 3 3 6 276 3R 8520869 8520888 TAAATCGCTTGGTTGTGTCG 59 8521126 8521861 GCATCCATTGCCTTCATCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG31347 FBgn0051347 FBtr0082664 2 1 1 60 3R 8517964 8517983 ATGTGGAGTCTATTCCCGTG 59 8517923 8517941 CTGTCGAAGTCCATTTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5641 FBgn0038046 FBtr0082594 3 1 1 125 3R 8254666 8254684 CGTAACCAGGACCTGAGTC 59 8254498 8254579 CTCCAGTTGACAAGTTGTCAG 59 NA Drosophila melanogaster 61 CG34402 FBgn0085431 FBtr0112655,FBtr0112654 3 2 3 109 3R 8212110 8212236 TCTGGCTAGATTGCTCCTG 58 8212308 8212327 CATCAGGCAGTTGTTCTTGG 59 NA Drosophila melanogaster 61 GstD7 FBgn0010043 FBtr0082574 2 1 1 60 3R 8204599 8204620 CCCTGACCAAATACTTCTTCCT 59 8204641 8204659 AGAGCTTCCTGATCTCCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31368 FBgn0051368 FBtr0301041,FBtr0301042 3 2 2 83 3R 7717006 7717029 CACGACTACCAGCTTATTAATGTC 59 7717067 7717153 AGCAAGATTCTGGTAGAAGTAGG 59 NA Drosophila melanogaster 61 CG14721 FBgn0037942 FBtr0082430 1 1 1 176 3R 7562000 7562018 AATGTCTTCCTGTTGAGCG 58 7562156 7562235 CTGTGCATGATATAGGTTCCA 57 NA Drosophila melanogaster 61 sals FBgn0051374 FBtr0082400,FBtr0300812,FBtr0082401,FBtr0082399 1 4 4 82 3R 7264081 7264159 CAGAGTATCCTCAAGGAGGAG 58 7264019 7264037 TCTAGCTTCATGGAGGCAG 58 NA Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 2 2 2 60 3R 7068726 7069512 TGCTTGTGGGTATTACCGG 59 7068684 7068702 TTCCGGTACTTGTACGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG4820 FBgn0037876 FBtr0113221,FBtr0082345 3 2 2 148 3R 7043275 7043351 TGAGACATGAAAGGGAGGC 59 7043518 7043537 GGAAGAGTTGATGTGCTGAG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12592 FBgn0037811 FBtr0082233 1 1 1 234 3R 6165652 6165670 GAAGGTAATTCAGCGCCAC 59 6165932 6165950 TCTTTAGCGGTGATGCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12814 FBgn0037796 FBtr0082182,FBtr0110786 3 2 2 81 3R 5998355 5998374 TCTTCCTGATCATGTTGCTG 58 5998140 5998314 TTCTCGATGATCTCTGTATTGG 57 NA Drosophila melanogaster 61 CG6254 FBgn0037794 FBtr0082184 1 1 1 92 3R 5985595 5985613 ATCACAAACTTGTGCACAC 57 5985458 5985542 CTAAATGGATCTTTAACCTCGC 57 NA Drosophila melanogaster 61 knk FBgn0001321 FBtr0082194 2 1 1 80 3R 5949263 5949286 CTTCCAGTTGAATACGTATAGTCG 59 5949144 5949225 CCATCATCGGATGACTTGAG 58 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 3 3 5 106 3R 5701849 5701867 CTTCACCTACAATGGACGC 58 5701936 5756095 CAATGGGTTCCTCATTTCCA 58 NA Drosophila melanogaster 61 CG8516 FBgn0037757 FBtr0082141 3 1 1 97 3R 5620328 5620400 ACTCGTCGAAGGGATACAC 58 5620461 5620479 TGTAGGGTTCCTGTTCGAG 58 NA Drosophila melanogaster 61 CG8312 FBgn0037720 FBtr0082076 1 1 2 112 3R 5448767 5448840 CATGCTCCTCTTCTTGCAG 58 5448916 5448934 GGATTATCGTAGACGGCGT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9393 FBgn0037710 FBtr0082113 2 1 1 114 3R 5388622 5388640 TTCTACTACCCGTCGTCCT 59 5388280 5388545 CATTGACAACGAGGTAGTCG 58 NA Drosophila melanogaster 61 CG8135 FBgn0037689 FBtr0082030 2 1 1 60 3R 5232774 5232854 TATTCCCAACCGCATTATGGA 59 5232876 5232894 AATAACATCCATGTGGCCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 3 3 3 82 3R 5161907 5161925 TGTTCTCGCTTATCATGGC 58 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 CG16735 FBgn0037666 FBtr0081975 1 1 1 84 3R 5079820 5079891 ACTACACATCTCAAGAGATAAGGG 59 5079931 5079952 GATTGCTCGAGGATTAAGAGTG 59 NA Drosophila melanogaster 61 CG11967 FBgn0037646 FBtr0081958 2 1 1 84 3R 4807882 4807972 CTTCTAAGCTTAACCGACGC 59 4808019 4808037 CATTCCTGGAACCTCTCCA 58 NA Drosophila melanogaster 61 grn FBgn0001138 FBtr0300040,FBtr0081808 3 2 2 108 3R 3979055 3979073 CAACTGCAAGACCACAACC 59 3975441 3978985 GAGTGGACGATTGACATTGTG 59 NA Drosophila melanogaster 61 CG42550 FBgn0260723 FBtr0301216 2 1 2 105 3R 3826729 3826818 GAACAATTTGGTCCGTGCT 59 3826642 3826660 TTGTACCGTGGCTGTAGTC 59 NA Drosophila melanogaster 61 alpha-Est2 FBgn0015570 FBtr0081540 2 1 1 80 3R 3369162 3369183 CCGGATTACTTCATGAAGAAGC 59 3369219 3369630 CTTTAGACTGAGAAATCCTAGTGC 59 NA Drosophila melanogaster 61 wa-cup FBgn0037502 FBtr0301649 3 1 1 91 3R 3246861 3246935 AGCAGAGGATCTGTTGATGAG 59 3246988 3247006 AGCGATTGGACTCGTACAG 59 NA Drosophila melanogaster 61 Gld FBgn0001112 FBtr0081596 2 1 1 117 3R 3083201 3091094 CTACGATCTCTATCAACATGTCC 58 3083106 3083124 CCCATGAACAGCATGAAGG 58 NA InUTR Drosophila melanogaster 61 dj FBgn0019828 FBtr0089742 2 1 2 90 3R 2885204 2885281 TTTAAGGAAGCCGATGACCT 59 2885334 2885352 CGAGTGCAGAACGAATGTG 59 NA Drosophila melanogaster 61 zen FBgn0004053 FBtr0081670,FBtr0290294 3 2 2 81 3R 2579788 2579809 ATCCTTCCGAGGTTAAATACAG 57 2579664 2579682 TTGTAGTTGGGAGGCAGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG1076 FBgn0037402 FBtr0078585 2 1 1 80 3R 1948565 1948663 TCGTGGAAAGAGTTATCGCA 59 1948704 1948724 ACACTCTTCGATCTGCTTAGG 59 NA Drosophila melanogaster 61 cas FBgn0004878 FBtr0078725 1 1 1 83 3R 1540938 1541496 ACTCACCCAGCATGTATACG 59 1540874 1540892 GGGTCAGATCACTGTCGAC 59 NA Drosophila melanogaster 61 Spec2 FBgn0044823 FBtr0078739 2 1 1 126 3R 1443367 1444214 TACACTCGCTACATGCCTG 59 1443259 1443277 AAGGTATGTCTGCTGCTCC 59 NA InUTR Drosophila melanogaster 61 Hcs FBgn0037332 FBtr0078683 3 1 1 117 3R 1303168 1303187 ATTGGGCAGATATTGGTGGA 59 1303267 1303347 ATTCGTGCTCTCGAACCTC 59 NA Drosophila melanogaster 61 RpII18 FBgn0003275 FBtr0078787 1 1 1 176 3R 1197609 1197627 ATGGATGATGCGGACTACG 59 1197828 1197847 GTACTTTGTGGTAATGCGCT 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mms19 FBgn0037301 FBtr0078778 1 1 1 80 3R 1059442 1059518 TCCATAGAACTGCTGCACC 59 1059562 1059580 AGCCTGCCATATCTGATCG 59 NA Drosophila melanogaster 61 CG12590 FBgn0037294 FBtr0078773 2 1 1 60 3R 985675 985694 AGCTTGAGAGCCTACTTCTG 59 985716 985735 CTCCGAATGTCGTAAGTGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rpk FBgn0022981 FBtr0078859 1 1 1 108 3R 473035 473130 GATTTAAGGTACTGCTTCATGC 57 473199 473217 ATCATGTTGGGCTTCACTG 58 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922,FBtr0078921 3 2 2 81 3R 231255 231328 CAGACGTACAACTAAGTCTGAG 58 231370 231388 AGCCTCTGGTAACTTACGA 57 NA Drosophila melanogaster 61 CG14636 FBgn0037217 FBtr0111206 2 1 2 77 3R 40846 40864 AGTGTCTCTGGCGTAACAC 59 31450 31469 ATAAAGGATTGCCATCCCGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 snoRNA:Psi28S-3327a FBgn0082967 FBtr0113611 3 1 1 88 3L 13035887 13035906 TTTGCGTGTAGAATAGTGCG 59 13035955 13035975 AACTGGGATTTGTCGAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-1086 FBgn0083058 FBtr0113602 1 1 1 67 3L 833163 833181 AATGTCTGTGCTTTGGTCG 58 833114 833132 ACGATGCTAGTAAGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr009:3L FBgn0062928 FBtr0091951 1 1 1 80 3L 19480816 19480835 GTGGACTAAATGCGATGACC 59 19480330 19480777 GCATATTGGACTAATCTACCCAC 58 NA Drosophila melanogaster 61 CG40045 FBgn0058045 FBtr0111163 1 1 1 111 3L 24023859 24023879 AAACAAGAATCCAGTGGAAGG 58 24023951 24028544 GAATCCTCCTTCGTACAGTG 57 NA Drosophila melanogaster 61 CG32458 FBgn0052458 FBtr0078566 2 1 1 60 3L 23025275 23025294 AGTGATTCTGTTGAGACACC 57 23026605 23026627 CTAGAAGTGGATTAATAGCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32457 FBgn0052457 FBtr0300620 3 1 2 91 3L 22980817 22980835 TTGGTAAAGACCACACCGA 58 22980888 22980974 CGGGTTGTTGTAATGATTGAC 57 NA Drosophila melanogaster 61 CG11109 FBgn0037200 FBtr0078552 3 1 2 80 3L 22865435 22865544 CTTAAAGTGAATTCTGCTGCAC 58 22865585 22865603 GTTCACCCTGTAAGTGGTG 58 NA Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078473,FBtr0078474 3 2 2 97 3L 21943417 21943435 CTACTTGCTGCTTTGCCTG 59 21943496 21943569 TTGTGATGTTGCACCTGTG 59 NA Nonspecific Drosophila melanogaster 61 CG32447 FBgn0052447 FBtr0078460,FBtr0078461 1 2 2 174 3L 21687560 21687578 TATTATCCTCCCGCACCAC 59 21686810 21687422 GTATAAACATGCCTGGCGC 59 NA Drosophila melanogaster 61 Mkrn1 FBgn0029152 FBtr0078383 3 1 2 87 3L 21526719 21526738 AAGAAACTGTGAGTGCTGTG 58 21526271 21526669 GTCTGGACCTGATGACCTG 59 NA InUTR Drosophila melanogaster 61 CG10587 FBgn0037039 FBtr0078333 2 1 2 80 3L 20955086 20955106 GAAACTATTGCGTACGGTGAC 59 20954873 20955044 GTTAAATGAACCGTCGGCA 58 NA Drosophila melanogaster 61 CG4365 FBgn0037024 FBtr0078253 2 1 3 99 3L 20791865 20791888 CAGTTTATCTAGCCGAAAGTACAG 59 20791946 20792247 TTGCACTCGGAAGTAGGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5969 FBgn0036998 FBtr0078198 2 1 1 149 3L 20467004 20467022 ACCAAGAACAAGAAAGCCG 58 20467197 20467215 CACAAAGAAGGTCAGCACG 59 NA DesignNoJunction Drosophila melanogaster 61 trbl FBgn0028978 FBtr0078235 3 1 1 111 3L 20393602 20393620 CACCAGATCTGTCAGACTG 57 20390559 20393528 CATACTGCAGTTTCGTTCTG 57 NA Drosophila melanogaster 61 gogo FBgn0052227 FBtr0074848 1 1 1 80 3L 20263598 20263616 CTATCGGTGACCGAATCCT 58 20263454 20263556 TGAATAGCAACCATTCGTCAG 58 NA Drosophila melanogaster 61 CG7365 FBgn0036939 FBtr0074867 1 1 1 91 3L 20117837 20117974 CAACACCGAGACATTTACGA 58 20117765 20117783 AGAATCGGGTATCCGTCTG 58 NA Drosophila melanogaster 61 hale FBgn0036924 FBtr0074912 3 1 1 115 3L 19978587 19978664 AGGGTCTGAGCATTGACTG 59 19978490 19978508 AAATCTGTCCAAGCCACCA 59 NA Drosophila melanogaster 61 Shal FBgn0005564 FBtr0074973 1 1 2 82 3L 19565173 19565403 GGAGAAGACAACGATGTAGC 58 19565110 19565129 CTTTCCTAATGAGCTCGTGG 58 NA InUTR Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 1 3 3 85 3L 19252662 19253226 CCATTCTGGCAGGTTATCC 58 19252595 19252614 AAAGAACATGTGATGCACTG 57 NA Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 3 1 1 92 3L 19121728 19121814 ATGACTATAGATGTGGGCGA 58 19121655 19121674 GTAAATGGTGCTCTTGTCCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG42495 FBgn0260027 FBtr0300582 2 1 1 80 3L 18660884 18660958 TGTCTTATCGTTTGTCCTAGGT 59 18660996 18661017 AGAATGAGAGTTATTCCGATGC 58 NA Drosophila melanogaster 61 CG32195 FBgn0052195 FBtr0075125 2 1 1 81 3L 18108309 18108330 ATGCAGTTATTCATGGTGATCC 59 18108371 18108454 TGGAAATCCACAAGTGTTGC 59 NA Drosophila melanogaster 61 CG7510 FBgn0036741 FBtr0075182 3 1 1 80 3L 17621437 17621536 GACCTATTCACAATCATCCGA 57 17621578 17621596 CTGATGGACGATTGATCCG 58 NA Drosophila melanogaster 61 Fit2 FBgn0036688 FBtr0075275 2 1 1 60 3L 17019680 17019698 GACCTGGCGATATAACACC 57 17019719 17019740 CATCATGCACTTTATGTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nrt FBgn0004108 FBtr0075323 1 1 2 183 3L 16766733 16766826 CTAAGTCAAGAATTCTCGCAGAG 59 16766969 16766987 CTGGGTGTCTTCTCCTTGG 59 NA InUTR Drosophila melanogaster 61 Nplp3 FBgn0042201 FBtr0075369 2 1 1 226 3L 16311157 16311304 AATGTTCAAGCTGTGCGTC 59 16311494 16311512 GAGGAGAAGGATGCACCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG33690 FBgn0053690 FBtr0091670 2 1 1 123 3L 16194796 16194814 CTATCCTACGATGGCTGCA 59 16194898 16194983 CGATAAGATCGTGATCATAGGG 58 NA Drosophila melanogaster 61 Eip71CD FBgn0000565 FBtr0075553,FBtr0075552,FBtr0075555,FBtr0075554 3 4 4 142 3L 15505711 15505729 TCTGTACCACGATGAGGAG 58 15505834 15505912 TATACTTCTGGTGGTACGCC 59 NA Drosophila melanogaster 61 CG13461 FBgn0036468 FBtr0075664 1 1 1 60 3L 15045374 15045395 GATTCTGGAAATGTGGATAACC 57 15045335 15045355 CTGACTCCTCCTGATTATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13471 FBgn0036443 FBtr0075709 1 1 1 60 3L 14726423 14726443 AAATTCTGGGAAGTACATCGG 58 14726383 14726406 GATAACGATAGCGATAACGAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13482 FBgn0036419 FBtr0075744 3 1 1 263 3L 14322566 14322584 GTTTGGAATCCACCTTGGC 59 14322811 14322829 TGATGTCCATGGTGAGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075737 3 1 2 100 3L 14211379 14211452 CCAAGTTATCCGATCTGGCT 59 14211515 14211533 TAACTTCTCACCTCCTGCG 59 NA InUTR Drosophila melanogaster 61 CG10089 FBgn0036369 FBtr0075822,FBtr0075820,FBtr0075821 2 3 4 174 3L 13462161 13462886 CATGAACAAGGTCTTGCCG 59 13461947 13461965 ATTCTGGTCTGGCGTATCC 59 NA Drosophila melanogaster 61 CG32107 FBgn0052107 FBtr0075937 1 1 1 60 3L 12853744 12853763 ATTCCAGTATCCTGGTCGAG 58 12853703 12853724 CTTAGAATGAGTCTTCGTAGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10969 FBgn0036310 FBtr0075946 3 1 1 60 3L 12773800 12773818 GTGAAACCAGTGTTGGGAG 58 12773758 12773778 CCATCATAGACTGACCAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10969 FBgn0036310 FBtr0075946 1 1 1 60 3L 12772375 12772393 CCGTTTGGTCTGTATCCTG 58 12772333 12772354 TCTGCTGGAAGTAGTTATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17826 FBgn0036227 FBtr0076042 1 1 1 119 3L 11942991 11943067 AAACACTATGGAGTGGCCC 59 11943144 11943168 GATCAGATACTTGGTACAATCATCC 59 NA Drosophila melanogaster 61 CG7557 FBgn0036159 FBtr0076174,FBtr0076175 2 2 2 76 3L 11438776 11438858 AGATACTTTCTGCAGTCCCG 59 11438897 11438915 CCTGATTCAGAACCACCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7839 FBgn0036124 FBtr0076207 2 1 1 86 3L 11071416 11071507 ACAGAGTCACGATATGTCCTC 59 11071555 11071573 CCCTGACCCTTTACCTTGG 59 NA Drosophila melanogaster 61 CG6628 FBgn0036072 FBtr0076311 1 1 1 80 3L 10159545 10159569 GGTGGAATCAGAGTATCAATATCAC 59 10159431 10159508 AATTGCGAATGGAATCTCCC 58 NA Drosophila melanogaster 61 CG6685 FBgn0036062 FBtr0076355 2 1 1 80 3L 9961134 9961218 GAATGGCATTCTCCAGTATGTG 59 9961075 9961094 TTTAAGCTAACGGAGTCGCA 59 NA Drosophila melanogaster 61 CG6709 FBgn0036056 FBtr0076360,FBtr0113156 3 2 2 80 3L 9886557 9886630 ACATGCGATACAAGAAATGGC 59 9886497 9886516 CCAGATTGTTATCGGATGCC 58 NA Nonspecific Drosophila melanogaster 61 CG8108 FBgn0027567 FBtr0076339,FBtr0076340 3 2 2 80 3L 9862409 9862552 TGGATCACATTAGGAACAAGG 57 9862591 9862612 TATTCAAATCTATCTCGCGCTC 58 NA Drosophila melanogaster 61 CG32036 FBgn0052036 FBtr0114525 2 1 1 92 3L 9481737 9482172 CATCGAAGTTCAGAAATTCGG 57 9481665 9481685 GGTATCTTGTTCAAGTCTTGC 57 NA Drosophila melanogaster 61 CG14180 FBgn0036003 FBtr0076467 2 1 1 90 3L 9466705 9466723 TACAGAGTAGTAGCCAGCA 57 9466777 9467164 AGATTGGATAGCCCATTGC 57 NA Drosophila melanogaster 61 PGRP-LF FBgn0035977 FBtr0076439 3 1 1 82 3L 9343083 9343101 ACCTTAAGCTTCCCGTCTC 59 9343145 9343561 GCGGTATATGCAAACATCCTC 59 NA Drosophila melanogaster 61 Argk FBgn0000116 FBtr0076545 3 1 6 70 3L 9043448 9050651 GTTGCAAAGCAAACAAGACAC 59 9043398 9043416 ACTTGGCATAACCCTCCTC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG5087 FBgn0035953 FBtr0076520 3 1 1 80 3L 8992687 8992762 ACTACTGACTGAAACCACCA 58 8992803 8992823 TGCCACTGAGTAAATACTCCC 59 NA Drosophila melanogaster 61 CG5653 FBgn0035943 FBtr0076559 2 1 1 60 3L 8959163 8959181 GGTGAGATCCAACAAGGAG 57 8959121 8959139 AGCAATGTCGTGAATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 2 3 3 81 3L 8921173 8921192 GCCGTCATGTTCTTCATGAG 59 8921236 8923489 AGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG6776 FBgn0035904 FBtr0076622 2 1 1 80 3L 8512069 8512617 CATTTGGCCAAAGGTTCCC 59 8512660 8512679 GTAGGGACAGAACCTCATGG 59 NA Drosophila melanogaster 61 CG8209 FBgn0035830 FBtr0076753 2 1 1 102 3L 7969667 7969780 GAACGTGTTGAATATGCACTG 58 7969844 7969862 CTTGACGGGATGGTATTGG 58 NA Drosophila melanogaster 61 CG32373 FBgn0052373 FBtr0076806,FBtr0076805 3 2 2 81 3L 7750857 7750941 CTGTAATGATATCGACGAGTGC 59 7750980 7751001 GCATATGAATTCACCAGGAAGG 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 1 5 5 98 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 Surf1 FBgn0029117 FBtr0076897 3 1 1 80 3L 6951914 6951996 CTCTACCAGACGATCTCACTG 59 6952038 6952056 CCTTGTCGTGAAGGAAACG 59 NA Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076945 1 1 2 89 3L 6906615 6907521 CAACACAACTGGACATAGCAC 59 6906546 6906564 AACTGGTCACTATTCCCGC 59 NA Drosophila melanogaster 61 Cpr65Ax2 FBgn0042118 FBtr0077022 3 1 1 87 3L 6143720 6143808 TCATATGCAGTTGAAACCAGC 59 6143653 6143671 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific Drosophila melanogaster 61 Lcp65Ag2 FBgn0020637 FBtr0077059 3 1 1 80 3L 6126447 6126527 AGCTTCAAATACGACTGGGA 59 6126386 6126405 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 CG10467 FBgn0035679 FBtr0077063 2 1 1 60 3L 6086919 6086939 ACTCCTATTTCAACCTAGCTG 57 6086879 6086897 ATGGTGTGCTCGTAGAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10477 FBgn0035661 FBtr0077068 1 1 1 129 3L 6027391 6027461 CTCATTGCACCAAAGGAGC 59 6027280 6027298 AAAGTAGCCGCATTGTAGC 58 NA DesignNoJunction Drosophila melanogaster 61 S6k FBgn0015806 FBtr0077114 1 1 1 80 3L 5798972 5798993 AGACAAATTCCAGTGGATTCAC 59 5793803 5798932 AACGTAGGTGAAACCTTGGA 59 NA Drosophila melanogaster 61 CG32235 FBgn0047330 FBtr0073355 3 1 1 172 3L 4860199 4860283 GCAATTAATTGTGGACAACGC 59 4860047 4860066 CATACGGGAACCTGAATCCT 59 NA InUTR Drosophila melanogaster 61 NT1 FBgn0261526 FBtr0301518,FBtr0301520,FBtr0301608,FBtr0301517,FBtr0301519 2 5 5 93 3L 4505302 4505412 AAAGTTTGAACAGGTTCGCA 59 4505228 4505251 GGTAGAGCTCTTTATGAGATTTGC 59 NA Drosophila melanogaster 61 CG13720 FBgn0035555 FBtr0073327 1 1 1 60 3L 4499699 4499719 TGCAACACAATATCTACCCGA 59 4499659 4499679 GCAAATTGATGACCTCTTCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073300,FBtr0073299 2 2 2 207 3L 4429401 4429419 TTCAAGACGGAAAGTTCGG 58 4429653 4429671 GATTTGCAGGAAGACTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nAcRbeta-64B FBgn0000038 FBtr0073299 3 1 2 116 3L 4433352 4433370 TTGGTACGACTACCAGCTG 59 4433448 4433623 CCATCGGCATTATTGAAGAGC 59 NA Drosophila melanogaster 61 CG15020 FBgn0035543 FBtr0073298 2 1 1 80 3L 4424831 4424849 GTGGCAGGAGGAATACTGG 59 4424890 4424974 GCTTCGATATGTTGAACTCTGG 59 NA Drosophila melanogaster 61 TfIIEbeta FBgn0015829 FBtr0300449,FBtr0073234 1 2 2 80 3L 4287377 4287472 GGATGCCACAACATACAAGAC 60 4287511 4287532 CGCATGAATTTCACAATCTTGG 59 NA Drosophila melanogaster 61 dib FBgn0000449 FBtr0073205 2 1 1 81 3L 4062825 4062843 ACAAGAATCTCGCAATGGT 58 4062885 4063046 GGTAAGCAAACAGGTTAATTCC 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204,FBtr0290290 3 2 2 129 3L 3613198 3613762 GATAAGAAATTGGATCAGCTGG 57 3613851 3613870 CTAGAGTGTTCCTCGAAAGC 58 NA Drosophila melanogaster 61 CG10359 FBgn0035452 FBtr0273204,FBtr0290290 2 2 2 117 3L 3613101 3613119 CAGATGCGACTACAAGGAG 57 3613197 3613761 CAGCTGATCCAATTTCTTATCG 57 NA Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0300749,FBtr0073076 1 2 2 78 3L 3377173 3377191 TTGGATACCTGGAGGACAC 58 3377233 3377251 CAACAGAGAATTCCCAGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12012 FBgn0035444 FBtr0073076 2 1 2 76 3L 3376886 3376904 AGATACCCGTAAAGACGCC 59 3376944 3377013 CTATCAGCCGGGAATCCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG16984 FBgn0062517 FBtr0072928 1 1 1 74 3L 2595972 2596046 AATCCTGTTGTGGAGAGGG 59 2596084 2596102 TAGCTTCTTGTCCTCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 dos FBgn0016794 FBtr0072926,FBtr0072927 2 2 2 88 3L 2593243 2593266 CGCGTAGTCATAATAACATAGGTC 59 2593313 2593399 GGCCAATTGTTGCAGACTC 60 NA Drosophila melanogaster 61 CG32298 FBgn0052298 FBtr0299807 3 1 1 80 3L 2390411 2390490 TTCAAAGGACCTATCAACAGG 57 2390351 2390369 GTCGACCCATTGATATCGT 57 NA Nonspecific Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 1 2 2 187 3L 2370045 2370123 CAATTGCTGCTCTTACAAATCG 59 2369879 2369897 TTCTCCACGCCTTCTTCTC 59 NA Drosophila melanogaster 61 CG12020 FBgn0035273 FBtr0072778 2 1 1 91 3L 1798303 1798321 CAACAAGAAGGTGGAGCAG 58 1798435 1798458 GAGTGATATGCTTCATATGTGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18173 FBgn0035265 FBtr0072796 3 1 1 63 3L 1736902 1736974 TTGGGATTCGGTTTGTTGG 58 1736857 1736875 CATAGTCGGAGATGCCCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12105 FBgn0035241 FBtr0072824 1 1 1 60 3L 1612818 1612837 GGAACCCAAAGGAACTACAG 58 1612777 1612797 AGATGGTTTGATTACGGACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pUf68 FBgn0028577 FBtr0072710,FBtr0301523,FBtr0300418,FBtr0072707,FBtr0300417,FBtr0072708,FBtr0300419,FBtr0300420,FBtr0300416,FBtr0072709 3 10 10 93 3L 1498352 1498370 CGAGTACGCCAACAAACAG 59 1498215 1498297 AATAGATCGACCCACTCTCAG 58 NA Drosophila melanogaster 61 robl62A FBgn0028567 FBtr0072695 2 1 1 60 3L 1477947 1477965 ATAAGCTGTGCTTTCTGCG 58 1477989 1478007 TCCTCTGGACTAACCAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nerfin-1 FBgn0028999 FBtr0072592 3 1 1 60 3L 909979 909999 AACATAGTCGAGATCACGGAG 60 910021 910039 CGATCACGTTCTTGATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13902 FBgn0035166 FBtr0300712 3 1 1 125 3L 841145 841164 GAGGAAACCGGATATCTGGT 59 840988 841057 AATCTTGAAGCAACAGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 snoRNA:Psi18S-841a FBgn0086669 FBtr0091766 2 1 1 61 2R 17214614 17214635 TGTAAGCTTGCTAGAATAAGGG 58 17214657 17214675 CTGGGCTGAAGATAGTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33364 FBgn0053364 FBtr0086356 1 1 1 60 2R 15649615 15649635 TAGTACTTAGATGAGGGACCG 57 15649575 15649593 AAAGTTGTGGATGAGGCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 pncr016:2R FBgn0062961 FBtr0091953 3 1 1 139 2R 14598982 14599059 TGACTGCTGATTGCTTAACG 59 14599156 14599179 GAATTACTTAGGATACAGAAGCCC 58 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 1 3 3 101 2R 20920194 20924125 CTCAATGCCGCTATTCAGC 59 20924184 20924208 CATCAGTTGATTTATAAGGGACTCC 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 2 2 3 80 2R 20766556 20766575 ACATAGTGGCCCTAATAGCG 59 20766614 20766697 GATTATGGAACCAAGTTACTCCG 59 NA Drosophila melanogaster 61 Cpr60D FBgn0050163 FBtr0072334 2 1 1 153 2R 20550894 20550913 ATTGAAACCCGTTTAGTGGG 58 20550702 20550720 CAGATCCTCCTCACTGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13581 FBgn0035014 FBtr0072300 2 1 1 60 2R 20394517 20394538 ATATAAGGCCATCTATTTCCGC 58 20394558 20394577 GAAGTCTTGGCCACATTGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13569 FBgn0034979 FBtr0072283,FBtr0072284 1 2 2 80 2R 20013301 20013373 CAAAGTCGGCTTCTGTCAC 59 20013239 20013262 TTTCCAGTCTTGTAGACATAGGAG 59 NA Drosophila melanogaster 61 tsr FBgn0011726 FBtr0072188 3 1 1 163 2R 19932538 19932561 GACCAGTTTCTAGAAGATATCCAG 58 19932263 19932344 TTCTTCTTGACCTTGGCAG 57 NA Drosophila melanogaster 61 usnp FBgn0034913 FBtr0072236 1 1 1 76 2R 19731944 19731962 TATGCTGAGAAGCGAAGGG 59 19731817 19731904 GTTTCGTAGAGCAGACCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0290120,FBtr0100330,FBtr0100329 3 3 3 80 2R 19654955 19655680 CGATAATCTGCAGGTCAAACG 59 19654895 19654913 CTGGGACCCTTTAGTAGGC 59 NA Drosophila melanogaster 61 chrw FBgn0015372 FBtr0072120 1 1 1 95 2R 19408476 19409589 AATTGCAAATCTGGGATACAGC 59 19408402 19408420 GATCGAACACCAGAATGGC 59 NA Drosophila melanogaster 61 Or59c FBgn0034866 FBtr0072020 3 1 1 100 2R 19360424 19360442 ATAGCTAATCTGCGGCAGG 59 19360287 19360360 TGGGAGCACTGTATGATGG 59 NA Drosophila melanogaster 61 CG30414 FBgn0050414 FBtr0072032,FBtr0302316 3 2 2 128 2R 19272687 19272707 GCCTATTCTCAAATCCATGGA 57 19272459 19272532 CCAAGCGTACTCTCATGTG 58 NA Drosophila melanogaster 61 CG34371 FBgn0085400 FBtr0112596 1 1 1 81 2R 19060516 19063681 ATCTATACCTTTGATGCGCGA 59 19060455 19060473 GGGCCTTCTTGTTGAACAC 59 NA Drosophila melanogaster 61 PIP5K59B FBgn0034789 FBtr0290094,FBtr0290095,FBtr0071900 3 3 3 90 2R 18764356 18764443 CATCAGCAGGAATAAGTCAGTG 59 18764494 18764512 GTCGATGGGTTCACTCTCC 59 NA Drosophila melanogaster 61 CG30275 FBgn0050275 FBtr0273315,FBtr0273317,FBtr0273316,FBtr0273314,FBtr0273318 3 5 5 80 2R 18595526 18595545 GTTCCGTAACTATCCCTCCA 58 18595586 18595665 ATGGATAGGCAGTATCTGGTG 59 NA Drosophila melanogaster 61 wrapper FBgn0025878 FBtr0071821 3 1 1 80 2R 18267413 18267432 AGTTCAAGAGCATACCAACC 57 18267474 18268365 GGAAGGGAGTGTTTAAGGTG 58 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 2 2 2 159 2R 17969992 17970010 GATCTTCCGACAGATGTGG 57 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 CG34370 FBgn0085399 FBtr0299544 3 1 1 80 2R 17882165 17882183 AATACGTCCTGCAGCTACC 59 17877297 17882121 TCGATTGATGCGGAAACTG 58 NA Drosophila melanogaster 61 CG4386 FBgn0034661 FBtr0071743 3 1 1 90 2R 17687599 17687617 CAGAAGTTTCAAGGGCGAG 58 17687462 17687548 TTGAACCTCCTGAAGAGTATCG 59 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 1 2 2 85 2R 17442488 17442506 ACAACATACGGGAGGTCAC 59 17442552 17442709 GCGAATGATTTGTAGTTTGGGA 59 NA Drosophila melanogaster 61 CG11180 FBgn0034528 FBtr0086254 3 1 1 174 2R 16510757 16510776 AAAGTACAACTTGTGTCCGC 59 16510546 16510564 GAAACCCAATCCTTCTGCG 59 NA DesignNoJunction Drosophila melanogaster 61 Obp57e FBgn0050145 FBtr0086265 2 1 1 85 2R 16435662 16435748 AATGTTCTCGCTAACACTTCAG 59 16435598 16435616 TTCTCCATCACTTGGTGGG 59 NA Drosophila melanogaster 61 CG30154 FBgn0050154 FBtr0086215 3 1 1 113 2R 16420937 16420955 TCTGCTTCGTCGTTCTCAG 59 16421099 16421119 TATTGTCGGTGGACTCTTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 MED8 FBgn0034503 FBtr0086297 1 1 1 60 2R 16213944 16213963 CTCATCAACATCACAGAGGG 58 16213903 16213924 AATAGTCTGGAACAATGTCGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15120 FBgn0034454 FBtr0086463 2 1 1 116 2R 15385740 15385758 CTAATGATCCGGGACGAGG 59 15385838 15387136 TTTCAATGTCCACCGTCCA 59 NA Drosophila melanogaster 61 CG11242 FBgn0034451 FBtr0086502 2 1 1 80 2R 15374146 15374166 AACTCTCACAATGATGCAGTC 58 15374034 15374106 CTCAAGTTTGGTCTTGAGCTG 59 NA Drosophila melanogaster 61 CG11257 FBgn0034442 FBtr0086525 1 1 1 90 2R 15278961 15278980 ATTCAGCCCATCTTGAAGAG 57 15279083 15279106 CCTTTAACCAGATATCCTCATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG15111 FBgn0034419 FBtr0086580 2 1 2 82 2R 15026844 15027206 CTAACTGGTCTGGTGGGTC 59 15027251 15027270 AAGATCAACGGTAGGACCAC 59 NA Drosophila melanogaster 61 Topors FBgn0034410 FBtr0086570 1 1 1 90 2R 14861676 14861694 GAAAGCTGTATGCTCTGCC 59 14861746 14861833 ATCTGAGCAGGATTGTTTCTG 58 NA Drosophila melanogaster 61 Vha100-3 FBgn0028669 FBtr0086602 2 1 1 60 2R 14796859 14796878 TGTCGGAGATTTGGATTCAC 58 14796818 14796837 GATACTGAGCCCAATACCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17669 FBgn0034352 FBtr0086722 1 1 1 60 2R 14341582 14341600 ATCCCGAGTCCTTTAACCT 57 14341540 14341558 GCATTTCCGTAGAGGTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prp19 FBgn0261119 FBtr0086723 3 1 1 148 2R 14337098 14337116 GATGATGCCTGCGTTAAGC 59 14335108 14336986 AGGTAAACCCTGACATCGC 59 NA Drosophila melanogaster 61 sub FBgn0003545 FBtr0086881 1 1 1 116 2R 13635029 13635050 AGCGAGACATCTATGATACCTG 59 13634873 13634952 CATCATCGCCCAGTAAGGT 59 NA Drosophila melanogaster 61 cyp33 FBgn0028382 FBtr0086945 3 1 1 86 2R 13432986 13433073 GATAATATGAATGACTCCGAGCTC 59 13433115 13433136 CTTGAAACTGTCCTCCTTAACG 59 NA Drosophila melanogaster 61 CG10953 FBgn0034204 FBtr0086997 3 1 1 89 2R 13053876 13053968 CTGTCATCATGAAATTCCTGGT 58 13053808 13053827 GAGGAGAGTAGTCGTAACCC 58 NA InUTR Drosophila melanogaster 61 Ark FBgn0024252 FBtr0086968,FBtr0086967 1 2 2 88 2R 12909216 12909234 GGATGTACATCGAGCAGAG 57 12909286 12909425 CTTCAGATACGGTTGCAGG 58 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100250,FBtr0100252 1 2 4 88 2R 12884559 12884577 CCGTGTTACCATGACTCGA 59 12884222 12884507 GTGTTGTAGCATTGCCGAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Acp53Ea FBgn0015584 FBtr0087080 3 1 1 155 2R 12637670 12637754 TACTGGCTCTCGTATTTGTG 57 12637534 12637555 GATTGAAGTCAATGCAGTTCAG 58 NA Drosophila melanogaster 61 CG15617 FBgn0034151 FBtr0087083 3 1 1 73 2R 12633672 12633691 CGAAAGAATTCGCGATACGT 59 12633559 12633577 CAGGTCCAATCCTCCTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8297 FBgn0034050 FBtr0087290 1 1 1 85 2R 11822386 11822407 CCAACCAACGATATAATGAACC 57 11822510 11822528 AGTAATCCGGAGAGTTCCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33464 FBgn0053464 FBtr0087305 3 1 1 65 2R 11759747 11759765 AACCGAAGATTCCTCCTCG 59 11759700 11759719 TTACTGTCCTCGGTATCCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp6a22 FBgn0013773 FBtr0087450 3 1 1 119 2R 10760365 10760451 TCATAGCAGAAACCCTTCGG 59 10760533 10760551 TCAGTAGCATTTGACCCGG 59 NA Drosophila melanogaster 61 HPS FBgn0033973 FBtr0087449 1 1 1 60 2R 10744485 10744507 CATTCCATTACTCGTACTTCCTC 58 10744527 10744545 ACGGTACTAAGAACGCCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 phyl FBgn0013725 FBtr0087516 3 1 1 279 2R 10316247 10319429 CGAAATTCAAGTTTCAGCCC 58 10315987 10316005 GAATAGACTATGGGTGCGG 57 NA DesignNoJunction Drosophila melanogaster 61 Shroom FBgn0085408 FBtr0290253 3 1 3 88 2R 10220418 10236910 ATCAGAAGATCGAATTCCAAGG 58 10236959 10236977 TTGTATATGCCATGGTCGG 57 NA Drosophila melanogaster 61 CG8394 FBgn0033911 FBtr0087577 2 1 1 80 2R 10087924 10087942 TAGGAACGAGTACCAGAGC 58 10087790 10087880 ATGCTACCTTGCCTAAAGC 57 NA Drosophila melanogaster 61 CG6191 FBgn0027581 FBtr0087678 1 1 1 80 2R 9470345 9470366 CATCTTTGAGAACCAAATGGAG 57 9469354 9470306 TTCTCATAAGTGAAGCACCTC 57 NA Drosophila melanogaster 61 Cap-G FBgn0259876 FBtr0299507,FBtr0301325 1 2 2 80 2R 9022188 9022271 CACCTATATGGATAAATTCTGCCAG 59 9022308 9022327 AGGAGCATGTTCTGGAACTC 59 NA Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 2 2 2 87 2R 8811822 8811840 CATGCAAGACCATCTGGAG 58 8811965 8811983 CCCGAAATAGACGTTGACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3790 FBgn0033778 FBtr0087815 2 1 1 80 2R 8760662 8760741 CCCATGATCAATCATATGGGTC 58 8760603 8760623 AAATCCTCCCAAGATTAGCAG 57 NA Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113079 1 1 4 121 2R 8744164 8744182 AAACGCAACTGTGGTTACC 59 8737635 8737653 TTACGTAGGCATTGCTCGA 59 NA DesignNoJunction Drosophila melanogaster 61 mos FBgn0033773 FBtr0087865 1 1 1 80 2R 8640217 8640290 ATTTACAGAGATCGCTCCG 57 8640155 8640175 CAGCAAATGAGACTCATTGTG 57 NA Drosophila melanogaster 61 CG34234 FBgn0085263 FBtr0112428 1 1 1 65 2R 8374752 8374829 TGATGAGAATGCGAGAAAGTC 58 8374707 8374725 CAGGCAGCATTTGTTCCAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG13154 FBgn0033736 FBtr0087953 2 1 1 171 2R 8315280 8315298 AAACGTTCAGAGCTATGGG 57 8315066 8315086 TTCTCTAAACGCTCTATGGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Den1 FBgn0033716 FBtr0087902 1 1 3 278 2R 8225540 8226049 TTTCGTGGCAACATACACG 59 8226291 8226309 TACACTGCGTAATCTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG8321 FBgn0033677 FBtr0087975 2 1 1 82 2R 7921923 7922996 GCGTCATCTTAACGATGCC 59 7923042 7923060 GGTCTCGTTCCACCTACTC 59 NA Drosophila melanogaster 61 otk FBgn0004839 FBtr0088028 3 1 1 96 2R 7890221 7890301 CTTCACCCATAGGGATCTGG 59 7890144 7890164 GCTATACTTGTCCTTGCAGAG 58 NA Drosophila melanogaster 61 CG30034 FBgn0050034 FBtr0088097 3 1 1 111 2R 7409525 7409543 GCATAAATGCGGAGTTTGG 57 7409054 7409450 TGAGCAGCATTTATGGAGC 58 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 2 2 2 92 2R 7344228 7344316 GTTTACCTACCGACTCGAC 57 7344372 7344390 TTTAGCATCCGAACAAGCA 57 NA Drosophila melanogaster 61 san FBgn0024188 FBtr0088126 3 1 1 81 2R 7248320 7248467 TACAGACAACATGACTAGGAGC 59 7248507 7248527 GGTGTTGAGCTTCTTTAGCTG 59 NA InUTR Drosophila melanogaster 61 CG34227 FBgn0085256 FBtr0112420 1 1 1 62 2R 7135698 7135716 TCTAACACTTCTGGCCCTC 58 7135742 7135760 GAATCATCCAAGGCGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13217 FBgn0033590 FBtr0088194 2 1 1 67 2R 7124092 7124110 AAGTTCCTTGCCCTGAGTC 59 7124043 7124061 AAATCCACAGGTATGGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12943 FBgn0033572 FBtr0088198,FBtr0113065 2 2 2 96 2R 6791588 6791669 CATCCACTTGCTGATAGCTG 58 6791728 6791746 CTCCTCGTAGGCAATCCTC 59 NA Drosophila melanogaster 61 CG12338 FBgn0033543 FBtr0088256 1 1 1 109 2R 6618254 6618272 CGGATCGGTTTAACGAGGA 59 6618098 6618181 ATCGGTCATCCATTGTTGC 58 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088277,FBtr0100608,FBtr0088276,FBtr0088275,FBtr0088280,FBtr0100606,FBtr0088281,FBtr0088278,FBtr0088282,FBtr0088279,FBtr0100605,FBtr0100607 2 12 12 100 2R 6499952 6500256 GCATATGGACATGTATAACTCGG 59 6500313 6500334 GATCCAAATTCGTATAGTGCGG 59 NA Drosophila melanogaster 61 CG12907 FBgn0250840 FBtr0088351 2 1 1 72 2R 6241505 6241526 CAAGTGCATTATATGGCATACC 57 6241625 6241646 TCCAGTTAAATATCCCATCCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 JhI-1 FBgn0028426 FBtr0088360 1 1 1 84 2R 6195875 6195951 AAGGAAAGGTCTGGATCGC 59 6195809 6195827 CAGAAATCCTGGTACGGCA 59 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273274,FBtr0088362 2 2 4 63 2R 6137328 6138397 CATCATCGTTCTGGTGTCC 58 6137283 6137301 CTTGTTTCCTCCACCACTG 58 NA DesignRelaxed Drosophila melanogaster 61 Hr46 FBgn0000448 FBtr0302438,FBtr0088366,FBtr0088368,FBtr0112799 2 4 4 80 2R 6096141 6096224 GTCAGGACGATCAGATATTACTG 58 6096083 6096101 AGAGATCAAGCAGTCTGGA 57 NA Drosophila melanogaster 61 sut4 FBgn0028560 FBtr0089675 1 1 2 60 2R 5974531 5974552 GTTAGAGTGTAATTTGCCTCTG 57 5974446 5974465 ATAAACTGAGTGGCAGTTCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1441 FBgn0033464 FBtr0088449,FBtr0088448 3 2 2 80 2R 5786777 5786865 CACATGAAGGTGATGTGGG 58 5786715 5786736 ACACCTATAGAGCATGTAGAGG 58 NA Drosophila melanogaster 61 CG1690 FBgn0033442 FBtr0088496 3 1 1 151 2R 5645242 5645329 AAGAACAAGGAGACCCAGAC 59 5645110 5645128 CACGATACGCTGTGATTCG 59 NA Drosophila melanogaster 61 CG13739 FBgn0033403 FBtr0088558 1 1 1 103 2R 5238943 5238961 TACTCTCGAGCAGCAAGTG 59 5238623 5238641 ATGTAAGTCAGTCCGTCGT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0100119,FBtr0088606,FBtr0088607 1 4 4 80 2R 5120058 5120076 CTATGCAAGATCCGTTGCG 59 5119334 5120016 CACATTCCCATTATCGTCCTC 58 NA Drosophila melanogaster 61 CG8197 FBgn0033369 FBtr0088661 1 1 1 119 2R 4948865 4948957 CTCAGCTTGGAAGGAACAC 58 4948764 4948782 GTTGAACTGTGTCAGGCTG 59 NA Drosophila melanogaster 61 CG8213 FBgn0033359 FBtr0273385,FBtr0273384 2 2 2 93 2R 4858296 4858382 ATTGTCAGCCTGGATTCCT 58 4858221 4858239 TTCTTGGTCACTGAACGCT 59 NA Drosophila melanogaster 61 CG30350 FBgn0050350 FBtr0088636 1 1 1 60 2R 4714667 4714688 TGACCTCTATCTCAAAGATGCC 59 4714709 4714727 CTCTGTGTACAGCTGGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lcp2 FBgn0002533 FBtr0088761 3 1 1 79 2R 4321951 4322034 TCAAGTTTGTGATGATTCTCGC 59 4321893 4321911 AGCGTGTACATCATCGGAG 59 NA DesignRelaxed Drosophila melanogaster 61 RagC FBgn0033272 FBtr0088807 3 1 1 86 2R 4050203 4050287 GTTTATACACAAGGTGGATGGA 58 4050138 4050156 TTAAGGTCATCCGACGACC 59 NA Drosophila melanogaster 61 CG8712 FBgn0033258 FBtr0088823,FBtr0088822 1 2 2 60 2R 3985369 3985387 GTAGACCAATTGTGCTGCC 59 3985327 3985347 TTATAGACTTGGAGGATGCCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sut1 FBgn0028563 FBtr0088777 1 1 1 85 2R 3973575 3973836 ACTTTATTGGCGCAGAACTG 59 3973884 3973902 GAAATTGCACGTCCACGAG 59 NA Drosophila melanogaster 61 Optix FBgn0025360 FBtr0088866 1 1 2 114 2R 3928614 3928711 TAAATAAGCATCCAGCATAGCC 58 3928786 3928804 CCAGTGAGATGTCCGAGTC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG2915 FBgn0033241 FBtr0088879,FBtr0088878 3 2 2 85 2R 3846784 3846863 TCAAGCATAGAGTGTTGACCT 59 3846719 3846737 AGAGGCATCAATGCTTTCC 58 NA Drosophila melanogaster 61 CG1946 FBgn0033216 FBtr0088929 3 1 1 83 2R 3602548 3602569 ACGTCATTCTTCACCTATACCT 58 3602613 3603051 CATTTCGCCGTAGTACAGC 59 NA Drosophila melanogaster 61 CG1603 FBgn0033185 FBtr0088979 3 1 1 99 2R 3403398 3403481 GATAGCAAGGATATCCAGTACGA 59 3403321 3403339 GAAGTTCCAAAGAGCTGCC 59 NA Drosophila melanogaster 61 CG30384 FBgn0050384 FBtr0089048 1 1 1 60 2R 3072032 3072050 GCCCGAAGTGATATGTCCT 59 3072072 3072092 TTCTACATTGAACACCTCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 esn FBgn0028642 FBtr0089039,FBtr0089038 1 2 2 159 2R 3012689 3012928 GCGATGAGATCATCTTCTCG 58 3013050 3013068 AACATTGTGTCGAAGCAGG 58 NA Drosophila melanogaster 61 CG12831 FBgn0033141 FBtr0300063 3 1 1 80 2R 2960754 2960772 TCCTGCACAATCTCTTCGA 58 2960635 2960712 ATCCAACGGAGAAGTTAATGC 58 NA Drosophila melanogaster 61 lbm FBgn0016032 FBtr0089033 1 1 1 80 2R 2939055 2939073 GAGCTTCTACGAAAGCGAC 58 2939116 2939197 AAGGCGAAGCAGATTAACTC 58 NA Drosophila melanogaster 61 Or42b FBgn0033043 FBtr0086051 3 1 1 84 2R 1684769 1684851 CAGCAACATAAGTGTGGCA 58 1684703 1684724 GTCCGTCTTAAATTTGTCAGCT 59 NA Drosophila melanogaster 61 CR33318 FBgn0053318 FBtr0089857 3 1 1 117 2L 20924055 20924073 AGGAGAGCCAGTGATTGTC 59 20924210 20924229 TACACGTCTGCGTATAACTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG17490 FBgn0040009 FBtr0111256 1 1 4 125 2L 22431007 22432690 TATACTCGCCAAGGTACCG 58 22432776 22432797 GGTATACTTGGTTTCCTTTCCA 58 NA InUTR Drosophila melanogaster 61 CG14401 FBgn0032900 FBtr0081430 1 1 1 102 2L 20870748 20870837 TACCATGAGGGAATGCCAG 59 20870903 20870921 CAGGATCTGGTCCATCGTC 59 NA Drosophila melanogaster 61 CG9338 FBgn0032899 FBtr0081428 3 1 1 124 2L 20865471 20865491 ATCAAGTCAGACAGTAGCCTC 59 20865577 20866945 TTACCGGGAATGTCGATGG 59 NA Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0081452 1 1 2 80 2L 20820562 20820642 ACCTATCGAATTTCTGCTAGGA 58 20820503 20820523 CGTCAGAGTGTTAAATACGGT 58 NA Drosophila melanogaster 61 CG31680 FBgn0051680 FBtr0081383 3 1 1 123 2L 20640185 20640277 GGGCTTTGTTCTAAGTGAATCC 60 20640358 20640379 TTCTATCCACTGGTAGAACTCG 59 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081355,FBtr0081353,FBtr0081354,FBtr0081352,FBtr0301884 2 5 5 180 2L 20343659 20343747 TCTCCAAGTTTCAGGACGA 58 20343891 20343909 CAATCTTGTCGTGCCTGAC 59 NA Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0300967,FBtr0081318,FBtr0300966 2 3 3 80 2L 19778935 19779025 GACAGAACATCAACAACCAC 57 19778874 19778893 GGTTAAGGTCCAAGGATAGC 57 NA Drosophila melanogaster 61 CG10262 FBgn0032813 FBtr0081262 2 1 1 84 2L 19583867 19583885 ATCGTCGATGCACTAAAGG 57 19583667 19583685 AGTTGTCCATCGATTGCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241,FBtr0081242 1 2 2 80 2L 19488363 19488438 CGCACCAATTTACAAGCCA 59 19488480 19488500 AGGTATTCAGCCTCTTCTTGG 59 NA Drosophila melanogaster 61 kon FBgn0032683 FBtr0300341 3 1 1 84 2L 18491684 18491765 GGATAAAGTTAGATATCGGGTGC 59 18491622 18491644 CCAATACGCAGATGGATAAATCC 59 NA Drosophila melanogaster 61 CG10176 FBgn0032682 FBtr0300674 1 1 1 89 2L 18486191 18486635 AGGAATGTTCAGCTTACAAGAC 58 18486685 18486703 TCAGCAGCAAGAGGATCAG 59 NA Drosophila melanogaster 61 CG15152 FBgn0032665 FBtr0081034 2 1 1 60 2L 18114691 18114709 GGATGAGACTAAGGCTGGA 58 18114732 18114751 GGTAAAGTCAACCTCATCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33928 FBgn0053928 FBtr0091932 1 1 1 124 2L 17436473 17436545 TGCATTTGGTGGAAAGTAGTC 58 17436369 17436390 CGATAGGTATTTGTAAGTGCGA 58 NA Drosophila melanogaster 61 CG31804 FBgn0051804 FBtr0080967 2 1 1 60 2L 17363798 17363817 TCGAAAGCTAGTCAAGACCT 58 17363840 17363858 TTTGCTTCTGTGGTTTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34169 FBgn0085198 FBtr0112360 2 1 1 60 2L 17173747 17173766 ATTTACGCCGAAAGTAGGGA 59 17173789 17173807 TTCTCCTGGCGTAGTATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4841 FBgn0032622 FBtr0080950 1 1 1 80 2L 16915342 16915426 CAGTGAGATTGATGCTGTGG 59 16915466 16915487 CGTGTTCGCTCTATAGAATTGG 59 NA Drosophila melanogaster 61 CG17331 FBgn0032596 FBtr0080936 2 1 1 93 2L 16732008 16732027 ACTCTACTGGGTATCAAGGG 58 16731860 16731955 TGTTCTGATCCTCTTTCATCAC 58 NA Drosophila melanogaster 61 CG5968 FBgn0032588 FBtr0080872 3 1 1 60 2L 16549706 16549724 GGATTCCTGCAGAAACTCG 58 16549608 16549626 TCAATGTCTCGAAGGTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 1 3 3 90 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451920 16452205 CATCATAGTACCAGCTGGAG 57 NA Drosophila melanogaster 61 CG5888 FBgn0028523 FBtr0080880 2 1 1 161 2L 16404619 16404638 TCTACTGCAAGCGAGATGAG 59 16400518 16404495 CAACGGGATATTCCTTGGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG4892 FBgn0028884 FBtr0080816 2 1 1 60 2L 16134144 16134163 CCAAGGTGACTTCAATCGAC 59 16134186 16134204 CTTGGATGGAACCTTACGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ku80 FBgn0041627 FBtr0080763 3 1 1 84 2L 15770543 15770616 GCAACTACCTTGAGAGTCG 58 15770477 15770496 CGTTGAACTTCTCGTAGTCC 58 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080766,FBtr0080768,FBtr0080767 1 5 5 83 2L 15758195 15758215 CAATATGTGGACGGATAACGA 58 15758070 15758151 GTCGGATTGCCATATCTAGC 58 NA Drosophila melanogaster 61 nht FBgn0041103 FBtr0300021 1 1 1 60 2L 15318517 15318537 CATCGAACAAGCTATCATCTG 57 15318477 15318498 CCCTCATATCGTTCTTCATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 1 3 9 139 2L 15261824 15261913 TGGGTTCCAAGGAGTTCTC 59 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703,FBtr0080702 1 2 2 80 2L 15091214 15091300 GGAGAAACTTAAAGAGCAACTG 57 15091341 15091359 TAGGGAATCGCAGACTCTC 58 NA Drosophila melanogaster 61 HDC02577 FBgn0250834 FBtr0080673 3 1 1 115 2L 14802900 14802920 CTCACAAACGATCCCAAAGAG 59 14803046 14803066 TAGATACTTCCTGTCGTCCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Adhr FBgn0000056 FBtr0100187,FBtr0006151 1 2 2 80 2L 14617628 14618076 GACCAAGAATATAGCGAAACTGG 59 14618115 14618134 GGCTTTATCGACTGCAACTG 59 NA Nonspecific Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463 2 1 3 182 2L 14274925 14277316 TCTTGACCAATCTCAGTGGA 58 14277522 14277540 CGTTATCCTTTAGCTGCGT 58 NA InUTR Drosophila melanogaster 61 CG15293 FBgn0028526 FBtr0080603 3 1 1 192 2L 14109136 14109208 TTCTGAAGCTGAAGGGAGC 59 14108962 14108981 TCCGGACCTAACTCATAGGT 59 NA Drosophila melanogaster 61 CG4500 FBgn0028519 FBtr0080591 1 1 1 64 2L 14028075 14028093 TGAACACCAAACAACGCTG 60 14028283 14028301 GCCAATATTTAGCGTTGCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8997 FBgn0028920 FBtr0080563 3 1 1 124 2L 13845285 13845303 GGTACTACGATCAGTCGGT 58 13845115 13845198 GATCGACTGGGTTTCAATGG 59 NA InUTR Drosophila melanogaster 61 DNApol-gamma35 FBgn0004407 FBtr0091627 2 1 1 60 2L 13832318 13832337 CATCAAAGCACTTGTTCTGG 57 13832277 13832295 GCGTAGGACCCTTTATCCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosalpha6T FBgn0032492 FBtr0080448 1 1 1 60 2L 13232874 13232892 ATGATGACATGACGGACCA 58 13232914 13232934 TCAGATGTATCATTGGGTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5776 FBgn0032450 FBtr0080407 3 1 1 194 2L 12704151 12704171 CCACCAAGTATGCCAATATGC 59 12703919 12703997 TGCAATGGAGTTTGAAATCCC 59 NA Drosophila melanogaster 61 bru-2 FBgn0043904 FBtr0080353,FBtr0080352,FBtr0110957,FBtr0080351 2 4 4 122 2L 12385730 12389197 GAGCTATAAAGGCCCTCCA 58 12389283 12389301 AGAATGCGTGAATCTGCTG 58 NA Drosophila melanogaster 61 CG34162 FBgn0085191 FBtr0302420 3 1 1 83 2L 11533378 11533396 ACTTATGCGATCTTCCTGG 57 11533440 11533519 GGAAGATGTTACCATTATGCTG 57 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300536,FBtr0300115,FBtr0300114,FBtr0300537 3 4 4 139 2L 11165958 11166036 TAAAGCGAGGAGCAAACCA 59 11165837 11165857 CGTACTTCTCTTTGATGTGCA 58 NA Drosophila melanogaster 61 RfC38 FBgn0028700 FBtr0080225 1 1 1 80 2L 11129993 11130121 CTTCCACAAGGATCAAGCG 58 11129931 11129950 GAGGGTCCGTAGAACATCAG 59 NA Drosophila melanogaster 61 CG4705 FBgn0032339 FBtr0301136,FBtr0080196 1 2 2 80 2L 11092421 11092441 GATGTATGTAATCCTCGCAGG 58 11092483 11092561 GCCAATAGGCGTGTATCTC 58 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487,FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 10 10 80 2L 10825823 10825956 ATAAAGCGTACATCATCTACCG 58 10825764 10825784 CTGATAATGTCCAGTGGTCTC 58 NA Drosophila melanogaster 61 CG6495 FBgn0027550 FBtr0080114 1 1 1 91 2L 10762305 10762530 CCAATCGCAAAGTGTTCCC 59 10762585 10762603 CATCGCAGGCATTGTACAC 59 NA Nonspecific Drosophila melanogaster 61 CG18301 FBgn0032265 FBtr0080094 3 1 1 84 2L 10532504 10532583 GTTCCTTAGGATACATGTTGTACG 59 10532625 10532644 ACATGGCGTTTCGTATAGGT 59 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021,FBtr0080022 3 3 3 60 2L 10427172 10427193 TGAATATCTTTCGCTTTGCTGG 59 10427213 10427232 AGCAGCAGTATTATGATGGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5037 FBgn0032222 FBtr0079992 2 1 1 80 2L 10332609 10332627 TGGACGTCACGAACTACTG 60 10332669 10332753 CATGAAACTTGTACGCAAGGT 60 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079950 1 1 2 135 2L 10222938 10222956 CTGAAGCGCACGTAAACAG 60 10223052 10223154 CAAAGTCATCTTGTCTGTTGCT 60 NA InUTR Drosophila melanogaster 61 CG13127 FBgn0032176 FBtr0079933 2 1 1 60 2L 10028611 10028631 ACGAGAAGGTGTATGAGAAGG 59 10028647 10028671 GATCTCTTCAGTTCCAACATATTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13130 FBgn0040965 FBtr0079974 3 1 1 73 2L 9984507 9984525 AGTGGTGGATAAGCAACCC 59 9984212 9984230 ATTCCGTTCCAATGCACTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13130 FBgn0040965 FBtr0079974 2 1 1 283 2L 9984508 9984526 CAGTGGTGGATAAGCAACC 58 9984003 9984023 TCATCATCCTCATTCTCATCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4709 FBgn0032169 FBtr0079884 1 1 1 93 2L 9954523 9954602 TACGAAGCACAATTGCTCG 59 9954658 9954677 GCAGATTGTTCTTTAGGGCC 59 NA Drosophila melanogaster 61 CG4594 FBgn0032161 FBtr0079878 1 1 1 109 2L 9920592 9920662 TTTAACCTCTGCCAGCTCC 59 9920733 9920753 ATACATTCTGCAATTCGGTCC 58 NA Drosophila melanogaster 61 CG4017 FBgn0032143 FBtr0079867 3 1 1 74 2L 9767733 9767752 ACGGTTATGTCTACACCCAC 60 9767843 9767861 CAACGCAGTTCTTGTCCTG 60 NA DesignNoJunction Drosophila melanogaster 61 CG17855 FBgn0032124 FBtr0079830 3 1 1 82 2L 9541568 9541646 CCCATAGCCTCATACAAACTG 58 9541689 9541708 AATTGTTCTTTGACAGCGGG 59 NA Drosophila melanogaster 61 CG31708 FBgn0051708 FBtr0079776,FBtr0079777 3 2 2 95 2L 9055329 9055347 GAATGCTTCACAGAGGCAC 59 9055153 9055272 GGCTTCCACTTTGTACTTGTG 59 NA Drosophila melanogaster 61 CG17906 FBgn0032086 FBtr0079762 1 1 1 173 2L 8994723 8994741 ATTTACCTGCACTTACGGG 57 8995015 8995098 TCTGGCATGGTTAATGATAGAG 57 NA Drosophila melanogaster 61 mRpL51 FBgn0032053 FBtr0079696 1 1 1 60 2L 8516999 8517017 CCAGAACGACTACATCGAC 57 8516957 8516975 GTAGAGCACCTTGACTGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13087 FBgn0032045 FBtr0079675 1 1 1 122 2L 8476702 8476816 GCAGTCAGTTCCACAACAC 59 8476901 8476920 CCTGTTCGACTTGAAGTCCT 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 3 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 fy FBgn0001084 FBtr0079712 3 1 1 82 2L 8401884 8401904 TATGCCCATATGGATGAGCTG 59 8401763 8401840 GCAAGGAATCTCATTGCGT 58 NA Drosophila melanogaster 61 CG7795 FBgn0032019 FBtr0301169,FBtr0301170 1 2 2 93 2L 8319141 8319159 TAAGACCAGTTGCGATGTG 57 8318950 8319085 AGGAACAACACTTTCTGGTC 58 NA Drosophila melanogaster 61 CG33121 FBgn0053121 FBtr0079557 3 1 1 60 2L 7889783 7889802 GACGGAACTAGTTGAATCCC 58 7889689 7889710 CGAGGTATTGCTGAAGATAAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG18591 FBgn0031962 FBtr0079560 3 1 1 60 2L 7885225 7885246 GGTTATACGAGAACATATCGCT 58 7885186 7885205 ATGTACTCATCGAATCCCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Proct FBgn0045038 FBtr0079562 2 1 1 141 2L 7870366 7870384 CTTGGTTTGGATGACGGTG 59 7866126 7866144 GTCCTCATTGCTCAACTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17378 FBgn0031858 FBtr0079337 1 1 2 86 2L 6775821 6775839 TTACGTACAGCTGACCCTG 59 6775889 6775977 ATGCTCTCGTCAAACTTGG 58 NA Drosophila melanogaster 61 CG11188 FBgn0031851 FBtr0079299 2 1 1 121 2L 6718978 6718996 TGAGCGAGATTACCAAGCA 59 6719143 6719161 GATGAGCTTGTTGTGCACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9536 FBgn0031818 FBtr0079267 3 1 1 80 2L 6475794 6476231 TGACCAATAGGAACGTTCC 57 6475732 6475751 GATAAGTGCCATCTAGCAGG 58 NA Drosophila melanogaster 61 CG42370 FBgn0259716 FBtr0299969 1 1 1 60 2L 6384817 6384837 AAGATCAGAAGGCTAGAGTCC 58 6384777 6384795 TTTCATCATCGTCGTCCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9505 FBgn0031805 FBtr0079253 1 1 1 60 2L 6369130 6369149 GGGAAGGAACTGTATTCGTC 58 6369171 6369190 GTAGACGTAGTTCATCGGCA 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9147 FBgn0031774 FBtr0079190,FBtr0079189 2 2 2 120 2L 6067222 6067293 GTACTTGAGAAGCTGGTGC 58 6067377 6067395 CAAAGCCCTGTTCCAACTG 59 NA Drosophila melanogaster 61 H2.0 FBgn0001170 FBtr0079227 3 1 1 127 2L 6013695 6013713 GTCTTCTCGAATCTGCAGC 58 6013484 6013604 AACCACACCTTGACCTGAG 59 NA Drosophila melanogaster 61 Gal FBgn0001089 FBtr0079230 1 1 1 80 2L 6004843 6005015 ATGCACTAAGGACAATTCTGAG 58 6004784 6004803 CAGTGAACCCAAAGTTTGTG 57 NA Drosophila melanogaster 61 CG14013 FBgn0031720 FBtr0079121 1 1 1 80 2L 5553325 5553399 ACAAGATACTATCGACCATCGT 59 5553266 5553284 TGTCCAGGTCTATGTAGCC 58 NA Drosophila melanogaster 61 CG8892 FBgn0031664 FBtr0079045 3 1 2 277 2L 4981554 4981572 GTTGCAGTCAGAAGGTGAC 58 4981222 4981240 GAAATAGCGAGCAAACGAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mRpL28 FBgn0031660 FBtr0078996 1 1 1 68 2L 4975041 4975059 ATTAGCAGCAGAATCGTCG 58 4975089 4975161 GAGGATTCCAGCTTTGTAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 betaggt-I FBgn0015000 FBtr0078991 3 1 1 259 2L 4946003 4946078 GATAACACCAGGAGCACCA 59 4946986 4947004 AGACTGGTGTACGTCATGG 59 NA DesignRelaxed Drosophila melanogaster 61 BG642163 FBgn0083938 FBtr0110769 3 1 1 106 2L 4641382 4641461 ATATCTCCAAGAACAACTTCCC 57 4641526 4641546 CAAAGGTATCCTGAGTTTGGA 57 NA Drosophila melanogaster 61 HP6 FBgn0031613 FBtr0077444 2 1 1 60 2L 4577823 4577842 TCGGACAATGGGTATGAGAC 59 4577782 4577800 ACTAGGCATTTCGTGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 3 1 1 166 2L 4408506 4408594 TATCGATGTGGTTCGATGGG 59 4408359 4408378 GGATAGTTGCTGAAGATGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10039 FBgn0031581 FBtr0077507 2 1 2 91 2L 4007831 4007849 TGTGGTTGTTCCCACTCAG 59 4007904 4008763 GATGGTAGCATTCGCATGG 59 NA Drosophila melanogaster 61 CG31958 FBgn0051958 FBtr0077495 1 1 1 63 2L 3786138 3786156 AGATGATACGCGAGTACGA 58 3786183 3786201 ATGTTGTTGGACTCCTCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31960 FBgn0051960 FBtr0077494 1 1 1 60 2L 3785168 3785189 GAGGTTCAGTCCATGATAAACG 59 3785210 3785228 CCTCCTTTGCAATGGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31777 FBgn0051777 FBtr0077542 3 1 1 86 2L 3706784 3706934 CCTTCAATACCCAGTATTTGC 57 3706718 3706738 CGGATCGTAATAGTATCCCTC 57 NA Drosophila melanogaster 61 CG31777 FBgn0051777 FBtr0077542 1 1 1 85 2L 3706784 3706934 CCTTCAATACCCAGTATTTGC 57 3706719 3706739 GGATCGTAATAGTATCCCTCG 57 NA Drosophila melanogaster 61 CG42467 FBgn0259957 FBtr0300303 1 1 1 80 2L 3701366 3701436 TAGAGATTATTCGGAGAAGTGC 58 3701476 3701495 TCATAAGTGTATCCATGGGC 57 NA Drosophila melanogaster 61 Sfp24Bc FBgn0261054 FBtr0301934 1 1 1 117 2L 3670376 3670461 CCAATGTGCAGGAATAAACCT 59 3670279 3670297 TAACTCGACAGCCTTCAGC 59 NA DesignNoJunction Drosophila melanogaster 61 Dot FBgn0015663 FBtr0077532 1 1 1 81 2L 3620377 3620513 ATTGGCGCTTCTATGTCAC 58 3620558 3620576 ACAATGCACCGATTCAGTG 58 NA Drosophila melanogaster 61 CG17261 FBgn0031501 FBtr0077656 1 1 1 148 2L 3043094 3043189 ACGCAAATGTGCTCTTCTG 59 3043301 3043319 TTGGTCATCGAGAGGATGC 59 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 3 7 7 83 2L 2951482 2951501 TAAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 2 2 2 98 2L 2753624 2753642 AAAGGAATCCGTGAAAGGC 58 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG9962 FBgn0031441 FBtr0077743 2 1 1 60 2L 2647054 2647074 TTTGTTGTAAAGTGCAGTCCC 59 2647014 2647032 TAAATGAGGACGTAGCCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15394 FBgn0250835 FBtr0113016 1 1 1 80 2L 2592215 2592292 GCAGTTGTTTCGCCTATCC 59 2592334 2592354 GAATGACTTGCTCATCTTCGG 59 NA Drosophila melanogaster 61 CG18641 FBgn0031426 FBtr0301712 3 1 1 98 2L 2411109 2411133 CCAACTTGTTCTCCTATCTAATTGG 59 2410973 2411056 AATAATTCCCTCGAGCTTTGTG 59 NA Drosophila melanogaster 61 CG42658 FBgn0261523 FBtr0302458 2 1 1 60 2L 2287605 2287686 TCAAAGTCACATCGAATGCC 59 2287564 2287582 CCTATCCTGCCGGTATTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG31679 FBgn0051679 FBtr0077809 1 1 1 93 2L 2237966 2238052 CAAGTTATATCCGATGTTATCCACC 59 2237897 2237915 CAGCTCCCTGAATTTGTCG 58 NA Drosophila melanogaster 61 aop FBgn0000097 FBtr0077851,FBtr0077850 2 2 2 125 2L 2158565 2158583 CTCAAGCTGGAGAATGGCT 59 2158396 2158478 GCGAATGAGTGGATAACAGTC 59 NA Drosophila melanogaster 61 Rrp40 FBgn0260648 FBtr0077883 2 1 1 61 2L 1728965 1728983 CACTTCGACACAAGGAACC 58 1729008 1729026 CGGGATGTACCTTCTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eno FBgn0000579 FBtr0302115 2 1 6 216 2L 1727656 1727675 TAAATTTGTGCAGATCCGCA 58 1727372 1727390 AAGTATCTCCCTACAGCGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14352 FBgn0031351 FBtr0077876 1 1 1 67 2L 1611868 1612026 AGTAGTACCTATTTCGAATCGG 57 1612054 1612072 AGCTTGACTTCGGTAGAGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG31926 FBgn0051926 FBtr0077931 2 1 1 60 2L 1496538 1496556 GTGTTTGACCTATGTGCCA 58 1496578 1496598 GGCACTAGTCATTGTAAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PPP4R2r FBgn0030208 FBtr0071452,FBtr0071453,FBtr0071451 1 3 3 80 X 10373679 10373697 TGAAGTACTTGTTCCGCGA 59 10373741 10373877 TGGGAATCTCCTCCAAACG 59 NA Drosophila melanogaster 61 fz3 FBgn0027343 FBtr0112928 1 1 2 88 X 672170 672188 ATGACGTTTCCATCGTGGA 59 672240 675523 CACCAGTTTGGCAATCTGG 59 NA Drosophila melanogaster 61 Sox100B FBgn0024288 FBtr0085735 2 1 1 95 3R 26899017 26899037 GTCATGTCCAAACAGTATCCG 59 26907622 26907641 GGGCTTCTTATCACTGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6059 FBgn0039491 FBtr0085130 1 1 1 82 3R 22949694 22949780 AATCTCTAACAAGGACCTCCA 58 22949632 22949650 TCTGGTGGTCCTTAAGCTC 58 NA Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204,FBtr0084774 1 2 2 60 3R 20926885 20926903 CTCCGCAATATCGCAACAC 59 20926926 20926945 AGATCGTTAGAAGGCTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13855 FBgn0038960 FBtr0084225 3 1 1 80 3R 18232127 18232149 TCCAACTGGAGATGAATAAGGAG 59 18232186 18232261 GACGGTGTTTGTCATAGTACAC 59 NA Drosophila melanogaster 61 CG13408 FBgn0038929 FBtr0084179 2 1 1 80 3R 17907606 17907626 AGAATAATGTGGAGGGAGCTC 59 17907668 17907985 TGTGCCTCAGATAGTCACG 59 NA Drosophila melanogaster 61 mRpS33 FBgn0038426 FBtr0083316 3 1 1 73 3R 12262013 12262093 AGTCCATGAAGGTGGTTCG 59 12261958 12261976 CGGATACCAGTTGATCACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG18616 FBgn0260444 FBtr0082643 2 1 1 87 3R 8457277 8457298 AGCAGTACTACATCATGAAGGA 58 8457346 8457424 GTTATAGTGCCCGCTTGTG 59 NA Drosophila melanogaster 61 CG31352 FBgn0051352 FBtr0301833,FBtr0300565,FBtr0300564,FBtr0082092 3 4 4 80 3R 5522450 5522696 CAAATTGAGATACGAATCGCC 57 5522390 5522408 ATCTCGTCCTCGTAGAAGG 58 NA Nonspecific Drosophila melanogaster 61 CG11052 FBgn0040524 FBtr0081821 2 1 1 107 3R 3834644 3834664 GAATTTCGAACACAGAGTTCC 57 3834503 3834575 GAAATGAAACGCCTTGCAC 58 NA Drosophila melanogaster 61 CG1115 FBgn0037299 FBtr0078777 1 1 1 80 3R 1052691 1053054 TCTGCAGCAGAATCCTCTC 59 1053095 1053116 CCTCTGATTTGCAATTAACCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 2 2 2 92 3L 21504343 21504421 CTGATATGGATCGAAGCTGTG 58 21504475 21504493 CAGAAATCCGACGAACAGG 58 NA Drosophila melanogaster 61 CG17824 FBgn0036234 FBtr0076046 1 1 1 60 3L 11975348 11975369 TTTGTAACGGACTAGAAGATGG 58 11975390 11975408 TAGTATGAGCGGCAATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 phol FBgn0035997 FBtr0076475 2 1 1 219 3L 9448847 9448865 TTCAGTGCAGCAATACCGA 59 9448551 9448571 GATAGATTCTTCACGATGGGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11815 FBgn0035299 FBtr0072852 2 1 1 60 3L 1970822 1970840 TATGGAACTCACGGTCACG 59 1970780 1970798 TAGTCCTCCGTCCAATCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snama FBgn0086129 FBtr0072249 3 1 1 83 2R 19976722 19976741 CATGATGAGTCACCACATGC 59 19976786 19977093 TGATACGGCACATAGCTGAG 59 NA Drosophila melanogaster 61 a FBgn0000008 FBtr0071763,FBtr0100521,FBtr0071764 1 3 3 80 2R 18025742 18039164 CATCAACCACTCACGATTCTG 59 18050413 18050433 GAGACGCATACTATGTTGGTG 59 NA InUTR Drosophila melanogaster 61 Prosbeta1 FBgn0010590 FBtr0087262 3 1 1 110 2R 11901546 11901632 ATTCGTCAAGAAGGCTGTC 57 11901454 11901472 TTGTAGAAGATGCGTCGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301193,FBtr0301191 1 3 3 81 2R 4895281 4895385 CATCCACGATGTCTTCTTGTG 59 4895220 4895238 TGTTAGTGGACCACCACTG 59 NA Drosophila melanogaster 61 CG8738 FBgn0033321 FBtr0088705 2 1 1 117 2R 4584620 4585165 GCGATCAGATAGAGGAGGG 58 4585246 4585264 TTGTTGTAGCCATCCAGCT 59 NA Drosophila melanogaster 61 CG1598 FBgn0033191 FBtr0088955 1 1 1 90 2R 3426908 3426990 ACTTGCAGTTCTAGCCTAGC 59 3426837 3426855 CATCCGATATGTTGTGCGC 59 NA Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086131,FBtr0086127,FBtr0086129,FBtr0086130,FBtr0300285 1 5 5 80 2R 2642479 2642562 GAAATTCTTTGCCAAGAAGCC 58 2642601 2642622 CTCAGTCGCATATAAGATGTCC 58 NA Drosophila melanogaster 61 CG34168 FBgn0085197 FBtr0112359 1 1 1 77 2L 16135190 16135212 CGACTACCAAATTTCTAGGACTG 59 16135068 16135086 GCACATTCCTGGATTGCAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rsf1 FBgn0011305 FBtr0080079 1 1 1 87 2L 10263356 10263375 GCAATCTGACCGACAAAGTG 59 10263288 10263306 TTGAAGGCTATCCACACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9021 FBgn0031747 FBtr0079154 2 1 1 115 2L 5904636 5904656 TCGATTGGTGGTCATATTCAG 58 5904411 5904429 CATCTGGAAAGCCATCGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10031 FBgn0031563 FBtr0077544 3 1 1 80 2L 3698758 3698841 AGAGACTGGTACCAGATCC 57 3698696 3698717 TGTAGTAGAACCTTTCTAGGCT 58 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 1 3 3 80 2L 738260 738332 GTTAACTATCAGGACATGCCC 58 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 ds FBgn0000497 FBtr0078045 1 1 1 80 2L 644483 644502 AGATCGTCGATGTGAATGAC 57 644300 644442 CTCCAAGTTCAGTAGCTTCAC 58 NA Drosophila melanogaster 61 CG31778 FBgn0051778 FBtr0077543 1 1 1 89 2L 3704938 3704959 TCAGCTAAGAATCACCATTGGA 59 3704624 3704888 CATGCATCTCGAACAACCG 59 NA Drosophila melanogaster 61 CG30334 FBgn0050334 FBtr0087949 2 1 1 91 2R 8328754 8328772 ACGAAGCAATTGTTGGAGG 58 8328631 8328701 CATGTTAGCTGGATTCTGGAC 58 NA InUTR Drosophila melanogaster 61 Ptpa FBgn0016698 FBtr0077589 3 1 1 95 2L 3377117 3377190 CAAGCAGCAGGTAAACTGC 60 3377248 3377267 AATTAAATCGTGGAAGGCGC 60 NA Drosophila melanogaster 61 roX2 FBgn0019660 FBtr0073515 3 1 2 60 X 11473461 11473481 CACACTTGAACTCGAATTCTG 57 11473500 11473521 TTGAGCGGGTGTTATTAATAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1824 FBgn0030403 FBtr0073658 1 1 1 92 X 12487972 12487990 CTACATCATCCCGCAGGAG 59 12487635 12487916 TTGAGCACCAGATGATCGG 59 NA Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0071409,FBtr0112969 2 3 3 93 X 9859486 9859629 GAAATGCGAGTTCCAGCAG 59 9859683 9859704 TCCTTGACACTAGCTATTTCGT 59 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 2 4 4 85 2L 7499870 7499888 CAGTGTGAACACGAAGCTG 59 7499745 7499824 GACTGCAGGTATTTAGATTGGG 59 NA Drosophila melanogaster 61 CR32657 FBgn0052657 FBtr0073625 1 1 1 61 X 11981447 11981465 TTTATAGCTCCGGCAACAC 57 11981543 11981566 GTAATTAGTGTAGTCCAGTCATGG 58 NA DesignNoJunction Drosophila melanogaster 61 Pros45 FBgn0020369 FBtr0077189 1 1 1 103 X 21187422 21187586 ATGCTAAAGTTCGGATGCTG 58 21187650 21187670 GACCAGCACTTTCTTCTTGTC 59 NA Drosophila melanogaster 61 Obp19a FBgn0031109 FBtr0077300 2 1 1 125 X 20286981 20286999 CAAGTATCCGAAGGTCAGC 58 20287087 20287181 TTTCCCTTCTTGATTGCCTG 58 NA Drosophila melanogaster 61 Rab35 FBgn0031090 FBtr0070028 1 1 1 68 X 20052302 20052947 CTAATAATCGGCGATAGCGG 58 20052253 20052271 TGAGAATGTGTCGTCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cdc42 FBgn0010341 FBtr0074751,FBtr0074752 2 2 2 88 X 19592264 19592343 AACGTCAAGGAGAAGTGGG 59 19592395 19592413 TCGCGCAAATCAATCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14220 FBgn0031036 FBtr0074768 3 1 1 114 X 19495538 19495655 TAGCGAAGAAGACACGGAC 59 19495442 19495460 CTTCAGTTCGCTGTTGGTG 59 NA Drosophila melanogaster 61 CG6617 FBgn0030944 FBtr0074615 1 1 1 199 X 18544122 18544200 ACTACTTGGTCACAGAGGG 58 18543941 18543959 GAACAGATAGCGATCGCTG 58 NA Nonspecific Drosophila melanogaster 61 CG15046 FBgn0030927 FBtr0074628 2 1 1 122 X 18382012 18382088 AAGGGTGAAGACACTGACTG 59 18381909 18381927 CACGCAAAGATGTGAGCTG 59 NA Drosophila melanogaster 61 Him FBgn0030900 FBtr0074549 3 1 1 94 X 18103819 18103838 AGATTTCTAGCCGAGAATGC 57 18104288 18104308 TCCTGATCGTTATCCTGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 scu FBgn0021765 FBtr0074511 2 1 1 227 X 17985413 17985992 CAATGATCAAGAACGCCGT 58 17986183 17986201 ACTTATCCTTGGCCGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074367,FBtr0074366,FBtr0074371,FBtr0074370,FBtr0074368,FBtr0074365,FBtr0074369 3 7 7 60 X 16579564 16579582 TTGATATCCACGCACATGC 58 16579426 16579444 AGTTCTCGTAGTGCACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 TH1 FBgn0010416 FBtr0074305 2 1 1 158 X 16284107 16284125 AAAGCGACCAATGACTGAG 58 16283899 16283986 ACCACAGGATATTTGATGCA 57 NA Drosophila melanogaster 61 CG8944 FBgn0030680 FBtr0074200,FBtr0074201 3 2 2 73 X 15639377 15639398 GGACTTTCTCAGCTATGATGAG 58 15639175 15639193 TGATGTGCATCGTAACCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG9240 FBgn0030669 FBtr0074060 2 1 1 144 X 15594832 15595031 TTTCGTCCTGTGCAAAGGA 59 15594706 15594725 GAACTGATCGGCTTTGATGG 59 NA Drosophila melanogaster 61 CG12708 FBgn0030666 FBtr0289961,FBtr0074052 3 2 2 108 X 15570475 15570493 GTACTTGGCCAGGGATGAG 59 15570565 15570583 CACTCCGATCGACTTCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15029 FBgn0030619 FBtr0073998 2 1 1 97 X 15078032 15078052 GTATGTGCTGAGCAAGAACTC 59 15078111 15078851 ACGACGACTTAGACTCGTG 59 NA Drosophila melanogaster 61 CG15196 FBgn0030296 FBtr0300849 2 1 1 87 X 11304349 11304368 ATAAACCGAAGCCGAATAGC 58 11304415 11304501 ACTAGGTAAGCATTTGGATGTG 58 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073484 1 1 15 80 X 11290113 11290131 CGATGGTCAATTCGCAGTC 59 11294857 11296751 AGATAATCTCGCCTCCTTCAG 59 NA Drosophila melanogaster 61 Or9a FBgn0030204 FBtr0071462 1 1 1 80 X 10353298 10353381 TGGCTAAAGAAATCGAAGTGTG 59 10353239 10353259 TAAGACTGAGCATTTGGTCAC 58 NA Drosophila melanogaster 61 Cp38 FBgn0000360 FBtr0071204,FBtr0300448 2 2 2 275 X 8375954 8375972 GATCGACCTACATTTGGGC 58 8376437 8376455 GAATGTTCTGGTCGGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 1 2 2 141 X 6905778 6905857 AGACCAATTTCTACCGCAC 57 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG4766 FBgn0027546 FBtr0070891 3 1 1 83 X 5893529 5894040 GAGTGCAATGGCAGATTCG 59 5893464 5893487 GACACCCATTTGATTCAGATACAG 59 NA Drosophila melanogaster 61 CG4766 FBgn0027546 FBtr0070891 2 1 1 81 X 5893527 5894038 GTGCAATGGCAGATTCGAG 59 5893464 5893487 GACACCCATTTGATTCAGATACAG 59 NA Drosophila melanogaster 61 CG5062 FBgn0029747 FBtr0070759 2 1 1 91 X 5075543 5075625 CGATTGCAGGTACTACACC 58 5075470 5075488 CATTTGGCCTCGGATATCG 58 NA Drosophila melanogaster 61 CG3626 FBgn0029706 FBtr0070652 3 1 1 80 X 4263412 4263498 ACCTATAAGGAATTGGATGTGG 57 4263539 4263557 GACATAGCCCAATTCACCC 58 NA Drosophila melanogaster 61 CG12498 FBgn0040356 FBtr0070489 1 1 1 60 X 2704236 2704254 CGTCACTGGATGCTTTGTC 59 2704277 2704296 TCGATGATCAGGCAACTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pcx FBgn0003048 FBtr0070395 2 1 1 80 X 2121250 2121360 CAGTCCTGGATATTAGATCCCT 58 2121400 2121419 CTGTTCAATGCCCAGATCAG 59 NA Drosophila melanogaster 61 CG14786 FBgn0027794 FBtr0070230 2 1 1 87 X 1352350 1352368 GACCTACACATCAAGCTGC 58 1352220 1352299 CGTCAATCTGAAAGGCTGG 58 NA Drosophila melanogaster 61 CG11417 FBgn0024364 FBtr0070212 3 1 1 60 X 1249076 1249094 CAGTACCAGCTAAACCGAC 58 1249118 1249136 TGTCTATGCTGTCGCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40743 FBgn0085772 FBtr0114222 1 1 1 60 U 10004072 10004090 TGAAGAACGCAGCAAACTG 59 10004112 10004132 AATGTCGATGTTCATGTGTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40581 FBgn0085750 FBtr0114200 1 1 1 62 U 8843559 8843577 CTGTTCTACGACAGAGGGT 58 8843515 8843533 ATATGAGAGGTCGGCAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41562 FBgn0085693 FBtr0114142 1 1 1 91 U 5467329 5467347 CAAGCACATGACCTTGACC 59 5467401 5467493 GATGCTTACTTGACTGCGAC 59 NA Nonspecific Drosophila melanogaster 61 snoRNA:Psi28S-2562 FBgn0082986 FBtr0113585 3 1 1 60 3R 16648649 16648667 GGGCGAATCTGATATCGTG 58 16648688 16648709 GCAAATCATTGATACTGTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CanA1 FBgn0010015 FBtr0085732 2 1 1 80 3R 26869125 26869146 AGTCAACATCCTGAACATTTGC 59 26869186 26869452 TTCTTGCGTAGCTCTTCCTC 59 NA Drosophila melanogaster 61 Sap-r FBgn0000416 FBtr0085714,FBtr0085713 2 2 2 80 3R 26709833 26709911 AAGTACTACAAGATCTGCTCTG 57 26709774 26709794 ATCAATATAGGGTCGTTTGGC 58 NA Drosophila melanogaster 61 Osi23 FBgn0039771 FBtr0085696 3 1 1 80 3R 26270014 26270097 ATTAATGGCTTAAAGAGGGTGG 58 26269955 26269976 GTAACCTCCTAAATGTTCTCCA 57 NA Drosophila melanogaster 61 CG31028 FBgn0051028 FBtr0290051,FBtr0290050 3 2 2 80 3R 25994096 25994173 ATTACATCCATAGGACACCCG 59 25994036 25994059 AAGGATTCCAGTGACCATATAGAG 59 NA Drosophila melanogaster 61 CG12068 FBgn0039695 FBtr0085481 2 1 1 60 3R 25621254 25621272 CATTGACCAGCTCACAACC 59 25621296 25621314 TAGAGGCGATATCTACGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pcd FBgn0024841 FBtr0085458 1 1 1 99 3R 25549067 25549166 AACGAGTAGAAGCCTGTCG 59 25549229 25549247 GATTCTCCGGAGATTCGCA 59 NA Drosophila melanogaster 61 woc FBgn0010328 FBtr0112857,FBtr0085178 2 2 2 82 3R 23083857 23083875 GTACTACGAGCGGTTTACC 57 23083729 23083812 TGACAATGTATTGCGAATCG 57 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 3 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809930 22810007 TTAAAGATTTGGCTCTCGCT 57 NA Drosophila melanogaster 61 dys FBgn0039411 FBtr0300618,FBtr0113293,FBtr0113294 2 3 3 81 3R 21907667 21907685 CATCGCATGTTCCTCTGTC 58 21905449 21907623 CCAAGACAACCTTCTGATCG 58 NA Drosophila melanogaster 61 Muc96D FBgn0051439 FBtr0084845 3 1 1 60 3R 21223728 21223748 ATTACTACATCTGTCGTCACC 57 21223688 21223708 TTGAAGTACCTATCACCACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Muc96D FBgn0051439 FBtr0084845 2 1 1 60 3R 21223727 21223745 ACTACATCTGTCGTCACCA 58 21223685 21223704 CCGTTGAAGTACCTATCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204,FBtr0084774 2 2 2 60 3R 20926946 20926965 GAAAGCCAACATTCAAAGCA 57 20926986 20927006 GGATATCTCCTTCACCTTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6995 FBgn0039229 FBtr0100424,FBtr0084699,FBtr0084700 1 3 3 109 3R 20647354 20647372 TCCACAAGAACAACACCAG 57 20647445 20647531 ATAACGCTTGTTACCGAGG 57 NA Drosophila melanogaster 61 CG4408 FBgn0039073 FBtr0084431 2 1 1 60 3R 19189024 19189044 CGCATCTATCAAGTGGAACTG 59 19188984 19189004 GCTCAAGAGCCTGAAATAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17109 FBgn0039051 FBtr0084351 3 1 1 101 3R 18921534 18921613 ATGTGGATTACACCGAATGTG 58 18921676 18921694 TCACCACAGGCTTCTTCTC 59 NA Drosophila melanogaster 61 CG5810 FBgn0038866 FBtr0084026 2 1 1 60 3R 16990040 16990059 CACATCTTCTCACAACTGGG 58 16990081 16990100 CCACTAGCTGATTACTGTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotC FBgn0044812 FBtr0083972 2 1 1 80 3R 16698766 16698849 ATTTCTCTACTATGCCTTGCC 57 16698891 16698909 GCTGTCAGATTCCCTTTCC 58 NA Drosophila melanogaster 61 CG11407 FBgn0038733 FBtr0083790 1 1 1 80 3R 15607730 15607806 CCTTAATTCCAGTCATTCCTTAACC 59 15607843 15607862 GTAAGCAGACCCGTAATCCA 59 NA Drosophila melanogaster 61 CG6231 FBgn0038720 FBtr0083810,FBtr0083809,FBtr0083807,FBtr0083808 3 4 4 87 3R 15443470 15443562 TTCAAGAGCATGGTGATCAC 58 15443402 15443420 GCGAGAACATGATGAAGGG 58 NA Drosophila melanogaster 61 CG7714 FBgn0038645 FBtr0083686 1 1 1 126 3R 14551971 14552072 GAAAGCCGTGATCTTTGTG 57 14551863 14551881 CTTGAATCCTGACTGTGGG 57 NA Drosophila melanogaster 61 CG10349 FBgn0015350 FBtr0083364 1 1 1 92 3R 12705954 12707207 CGTCGTAATTCTGGATCCCT 59 12708169 12708187 CTCATTCAGACCTGGCCTC 59 NA Drosophila melanogaster 61 Gyc-89Da FBgn0038435 FBtr0110963 1 1 2 69 3R 12298720 12298738 AGTGAAACTTAACCACGGG 57 12299097 12299116 CACTCTCATACAGCATTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17565 FBgn0038424 FBtr0083286 1 1 1 60 3R 12259204 12259284 AGTTTCTAAGCAACTGCCG 58 12259308 12259326 GCATACTGTCCAGGTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476,FBtr0113477 2 2 2 81 3R 11992975 11993670 CAGACCATATTCGGTCTTTGG 58 11993713 11993731 ATACCAGACCAAGCAGAGC 59 NA Drosophila melanogaster 61 Rh6 FBgn0019940 FBtr0083146 1 1 1 130 3R 11310037 11310123 TTGTGTACGGATTGAGCCA 59 11310217 11310235 CTGCGATTCGCTAATCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 RpII15 FBgn0004855 FBtr0082925 2 1 1 155 3R 10134842 10134915 AAGCCAATAGCCATGACGA 59 10135034 10135052 GTAATCGCAATTCCGGCAG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpII140 FBgn0003276 FBtr0082892 1 1 1 80 3R 9954980 9955062 GAAAGATTAATGCTCAGGTCTTCC 59 9955099 9955119 GAGAGTGAATCTTGTCGTCCA 59 NA Drosophila melanogaster 61 CG14367 FBgn0038170 FBtr0082819 1 1 1 81 3R 9519868 9519942 AAGTCCTTAGTCTTCGATCCC 59 9519979 9520003 GATTCTTGTATTCCTCGTGTATCTG 59 NA Drosophila melanogaster 61 Hsp70Ba FBgn0013277 FBtr0082679 1 1 1 60 3R 8291769 8291788 AACATCACGATCAAGAACGA 57 8291728 8291746 TCACCATGCGATCAATCTC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4066 FBgn0038011 FBtr0082566 2 1 1 60 3R 8137603 8137622 GCTTCAACAACAGATTCCAG 57 8137643 8137663 AATCGCTTGTGGTAGAATCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rrp46 FBgn0037815 FBtr0082248 3 1 1 131 3R 6239494 6239570 GTGGCAGTATTGATGCCTG 59 6239664 6239683 CCGGATCTAGCACATACTCG 59 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 3 2 2 237 3R 5826877 5826895 CAACCAAATCCGTCCAGAC 58 5826600 5826677 TTGTCTTTGAGTTTCTCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 2 4 4 81 3R 5592946 5592966 CCCTTCTATGATCACATGTGC 58 5592831 5592903 GACCGATCATGTTGTGCAG 59 NA Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 3 3 3 91 3R 5399132 5399150 TGTACAACGGGATGATTGG 57 5398995 5399078 GAATATCGTCTTGGGACCAG 57 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876,FBtr0301878,FBtr0302326 2 4 4 60 3R 4611482 4611502 AATGAACTCCTTGAGTTTCGC 59 4610305 4611460 TGCTCTCCATCTTATCGCT 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Coq2 FBgn0037574 FBtr0081858 1 1 1 155 3R 4141075 4141151 TGCAGCAGATCTATTCCCT 58 4140938 4140956 TTAGTGAGGATTGTCGCTG 57 NA Drosophila melanogaster 61 CG33324 FBgn0053324 FBtr0081727 3 1 1 117 3R 2272032 2272194 CAGTGTATCACGATGTTATTGC 58 2272272 2272290 CTTCGCCTGGTCTTATCCA 59 NA DesignRelaxed Drosophila melanogaster 61 corto FBgn0010313 FBtr0078844 3 1 1 169 3R 910429 910447 CTAGCAATTATCAGGCCGG 58 910278 910296 CTTTCCGCTCAACTTGTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14659 FBgn0037284 FBtr0078873 1 1 1 60 3R 656851 656869 AATGGCACTGCTTCTATCC 57 656809 656827 GTGTATATCACGCTCCTCC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 2 2 2 80 3R 190216 190296 CGTTATATCATGCTTTGAGTCC 57 190336 190355 AGCTCCGTATTGAAATGGAG 57 NA Drosophila melanogaster 61 mRpS5 FBgn0044510 FBtr0111147 2 1 3 111 3L 24530402 24530504 AGGAGTAACGGCGTTACTG 59 24530578 24530597 ACGACGGATCAATGTTTGAC 59 NA InUTR Drosophila melanogaster 61 CG33054 FBgn0053054 FBtr0078317,FBtr0078316 1 2 2 100 3L 21190877 21190897 CTGTACAAGCATCTTTGGAGC 59 21190675 21190693 TTCCAAGCCATCAATTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34261 FBgn0085290 FBtr0112456,FBtr0112455 3 2 2 129 3L 21190184 21190205 CAGTTGTTGAATTTGCAGAGAC 58 21190295 21190313 GGAGAAGTTCGTAGGTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6597 FBgn0036967 FBtr0074838,FBtr0074837 1 2 2 80 3L 20296378 20296396 ATGGATCATGGTCAACCGA 58 20296440 20300943 TCTGATATGGCGTCTGCTG 59 NA Drosophila melanogaster 61 CG32189 FBgn0052189 FBtr0075163 3 1 1 198 3L 17828093 17828111 CAACTGATTCGTCCACCAC 58 17827913 17827932 AATCTGGTGTTTCAGTTGGC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG9592 FBgn0036426 FBtr0290282 3 1 1 60 3L 14511322 14511342 CCTAGGATATCTCCTACCCGT 59 14511364 14511382 TCGCAAATTGTCTGACACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trn FBgn0010452 FBtr0075890 3 1 1 291 3L 13107781 13107801 CACCAACGATTTAATCTGCTG 58 13108495 13108514 ATTATCATCGCACTGACAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11262 FBgn0036329 FBtr0075872 3 1 1 60 3L 12988894 12988912 TGTATCCCTTGGTAACGGA 57 12988936 12988954 TAGAAACCGATCAGCAGCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10657 FBgn0036289 FBtr0075975 2 1 1 80 3L 12485842 12485925 CCGTACAAGTTCACTTCGG 58 12485780 12485800 CTGAGAATCCTCATCATCCAG 57 NA Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 3 1 1 125 3L 12185117 12185136 ATCTTCACCGAAAGTATGGC 58 12185224 12185298 CATCTCCGTGGACAGTACC 59 NA DesignNoJunction Drosophila melanogaster 61 simj FBgn0010762 FBtr0076262,FBtr0076264,FBtr0076263 3 3 3 87 3L 10680184 10680205 GACCATAAGCAATTCTGTTTCC 58 10680252 10680346 GCGATCATTCTTCTGATCGT 58 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 3 3 3 98 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503664 9503682 TCAATCTTCAGACCCAGCA 58 NA Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089493,FBtr0089494 1 2 3 142 3L 9360648 9360666 CTGCTCCAAGTGTTTCTCG 58 9361109 9361214 CACTCTGTGATTTGGTGGC 59 NA InUTR Drosophila melanogaster 61 Use1 FBgn0035965 FBtr0076537 3 1 1 142 3L 9129757 9129869 GAAAGGAACTGCTCCAGGA 59 9129633 9129655 CTGGGCATTCGTATAATACTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6673 FBgn0035906 FBtr0076653 1 1 2 128 3L 8516564 8516582 TTTGCCACCAACATTTCAC 57 8516275 8516293 ATAGTAACGCAGGACTCCA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14838 FBgn0035799 FBtr0076801 1 1 1 80 3L 7576783 7576801 ACAGCTGTTCAATGTCCAG 58 7576844 7576925 GCTTTCTCAGAGACCATGAC 58 NA Drosophila melanogaster 61 CG7548 FBgn0035792 FBtr0076830 1 1 1 60 3L 7499022 7499042 CCTTCAGTTATGCTACAGCTC 58 7498982 7499000 TTTGGTTCCTGATGAGCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14835 FBgn0035782 FBtr0076866 1 1 1 60 3L 7430221 7430240 TATTTGATGGCCCAATTCGG 58 7430180 7430198 GGACATTGACGGTTAACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mei-P22 FBgn0016036 FBtr0076836 3 1 1 60 3L 7237691 7237710 GAAAGTGGTTCACCTGAAGC 59 7237730 7237751 TAGATTATCCGAGGATCTCACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp65Aa FBgn0020765 FBtr0077021 2 1 1 93 3L 6145673 6145775 TGAAATTGATGCTAGTCGTTGG 59 6145601 6145623 GATTCGTACTCAAGAACTTCCAC 59 NA Drosophila melanogaster 61 CG6602 FBgn0035673 FBtr0077047 3 1 1 60 3L 6065322 6065341 AGCAGTAGCAAACTCTTGAC 58 6065362 6065382 GGTATAGCAACTCTTGAACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32413 FBgn0052413 FBtr0113435 2 1 1 93 3L 5896578 5896597 AGCTCAGATCCTTATGACGA 58 5896449 5896522 TTACTGCAACAGCCATGTC 58 NA Drosophila melanogaster 61 Dhc64C FBgn0010349 FBtr0273370,FBtr0073359 3 2 2 80 3L 4807941 4807960 GAACAATGAATTGCTCCTGG 57 4807821 4807900 TCCGAGGAAATCTTTATCCAC 57 NA Drosophila melanogaster 61 CG13716 FBgn0035563 FBtr0073319 2 1 1 60 3L 4634520 4634541 GACGCTATTCAAGAAGAATCTG 57 4634481 4634499 TTGATGTATGTGCATGCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073135,FBtr0110924,FBtr0073131,FBtr0073134,FBtr0110923,FBtr0110920,FBtr0110925,FBtr0302598,FBtr0073133,FBtr0110921 1 13 13 104 3L 3552857 3578301 CAGATTAACAATTTCCCGCGA 59 3578367 3578385 TTGTTACCGTGGTTGTGGT 59 NA Drosophila melanogaster 61 CG17737 FBgn0035423 FBtr0073044 1 1 1 80 3L 3223510 3223773 GAATTTAAACACTCGTGACCC 58 3223814 3223833 CTTATATGCACTAGCCCGTC 58 NA Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072950,FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 5 5 143 3L 2611831 2611849 AATAATCGGCTAAGCCGCT 59 2611548 2611649 GTACATGATCAGGCGATTCAG 59 NA Drosophila melanogaster 61 CG18171 FBgn0035262 FBtr0072800 1 1 1 60 3L 1722893 1722913 CCAATCGGAATTTACTCTCGG 59 1722853 1722871 GCATCGTTAAACGCCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 1 2 2 156 3L 360878 360896 ATCCCAGCATCAAGAAGAC 57 360681 360759 GCTTGGTCTAGCAAGTACTC 58 NA Drosophila melanogaster 61 snoRNA:Me28S-A2589a FBgn0086023 FBtr0114299 1 1 1 84 2R 17212742 17212762 CATACTGAGTGCCTAAATCGA 57 17212808 17212826 TATCAGACAAATGCCTCGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33379 FBgn0053379 FBtr0086371 1 1 1 60 2R 15644109 15644127 ATACATCGGTTCTCGTCCG 59 15644067 15644085 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30421 FBgn0050421 FBtr0072369 3 1 1 83 2R 20643425 20643446 CAACAGAGTCACCATCATACAG 58 20643490 20643572 TACGGGCGATATCCAAAGG 59 NA Drosophila melanogaster 61 CG30413 FBgn0050413 FBtr0072040 3 1 1 60 2R 19217356 19217376 CGAAGACGTATACTCTAACCC 57 19217316 19217337 GTGATCTTGATGTAGGTGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 comr FBgn0034667 FBtr0071735 1 1 1 60 2R 17752831 17752849 CCCGTACATTCCAGTTCCA 59 17752789 17752809 AACCTTCATACACTTCGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10527 FBgn0034583 FBtr0071541 1 1 1 139 2R 16959298 16960237 GCCAATCGAAGTCAACACC 59 16959177 16959195 AAATGGGACCGTTCTCCTC 59 NA Drosophila melanogaster 61 CG34202 FBgn0085231 FBtr0112395 3 1 1 103 2R 16640116 16640136 TTCTTAACAGTTCTTGCGGTG 59 16640264 16640282 TACTCCTGTCGAGTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG15127 FBgn0040730 FBtr0086482 3 1 1 68 2R 15568671 15568689 AGAGGTGATAATGCCCTCG 59 15568621 15568639 TGATTGTAGCTGGGTTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11423 FBgn0034251 FBtr0086834 3 1 1 60 2R 13482852 13482873 CGTGCATATAGAGCCTTAACAG 59 13482893 13482912 TATTACCAGGTCGTAAGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acp53C14c FBgn0053530 FBtr0091496 2 1 1 188 2R 12638635 12638710 CTTCAGCTTGCTTCTGCTG 59 12638465 12638486 AGGTCCTTAGTCTTAATGGCTC 59 NA Drosophila melanogaster 61 CG15708 FBgn0034099 FBtr0087188 3 1 1 200 2R 12129114 12129136 CTCTCGAAGATTAGCAAGATGAC 59 12128880 12128898 CGAGTTCTCCAATGGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 L FBgn0001332 FBtr0087492 1 1 1 80 2R 10369281 10382660 GAGTTCTTTAAGCACGCCT 58 10382704 10382722 GAGACCATACAACAGCTCC 57 NA Drosophila melanogaster 61 CG3884 FBgn0033786 FBtr0302321 3 1 3 123 2R 8838848 8839362 TTGTGACCGTTGACAACAC 58 8838743 8838761 CCTTCGTGAAAGGATCGAC 58 NA Drosophila melanogaster 61 CG17739 FBgn0033710 FBtr0087893 1 1 1 80 2R 8194900 8194921 GGTGGATGATAACTATGTGCTG 59 8194956 8195073 CTGAGGCTAACATTATACCTTTGAC 59 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0301453,FBtr0089379,FBtr0089380 2 5 5 80 2R 7202397 7202415 GATCCCGATATCCCACTGG 59 7202222 7202358 GATACCGATCATAATCATCAGGGA 59 NA Drosophila melanogaster 61 CG12391 FBgn0033581 FBtr0088205 2 1 1 152 2R 7037009 7037116 ATTACCTCGAGGACGATGC 59 7036875 7036895 TCTTATTGCTTGATTCCTGGC 58 NA Drosophila melanogaster 61 CG30020 FBgn0050020 FBtr0088235 1 1 1 80 2R 6776310 6777119 CCCGTTGGGCATTAAATATCC 59 6777160 6777179 GGCATTGGTTGATGTACCAC 59 NA Drosophila melanogaster 61 CG34033 FBgn0054033 FBtr0100088 3 1 1 83 2R 5708184 5708260 AGCTTCTTGGTTTAGTGCC 58 5708306 5708325 TGGAATAGGGTAACTTCGGT 58 NA DesignNoJunction Drosophila melanogaster 61 trpl FBgn0005614 FBtr0088471,FBtr0301662,FBtr0088473 1 3 3 80 2R 5651159 5651179 AGCGTCATTAACGTGATTGTG 59 5651220 5651302 CGAGTGCTCATCAATCATGG 59 NA Drosophila melanogaster 61 CG34141 FBgn0083977 FBtr0301077,FBtr0301076,FBtr0301512 2 3 3 116 2R 5150099 5150175 AGGATGTCGACAAGACAGC 59 5150001 5150019 TGTTAAGAGCCCTCGAAGC 59 NA Drosophila melanogaster 61 CG42382 FBgn0259728 FBtr0299994 2 1 1 139 2R 5054914 5054932 TCCGATGAAGACAGCAGTG 59 5054735 5054753 ACATCTCCCTTTCCAGCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8172 FBgn0033362 FBtr0301192,FBtr0301193,FBtr0301191 2 3 3 81 2R 4895281 4895383 TCCACGATGTCTTCTTGTG 57 4895218 4895236 AATGTTAGTGGACCACCAC 57 NA Drosophila melanogaster 61 CG30355 FBgn0050355 FBtr0088726 1 1 1 93 2R 4566936 4567011 GTACTGACATGAGATGGCG 58 4566861 4566881 TCATCTCTTTCGGTTGATCTG 57 NA Drosophila melanogaster 61 CG30375 FBgn0050375 FBtr0088799 1 1 1 90 2R 4153754 4153829 TTAGACAGGCGGAGAACAG 59 4153682 4153700 AGAGTGTTCGACTTGGAGG 59 NA Nonspecific Drosophila melanogaster 61 drosha FBgn0026722 FBtr0088850 3 1 1 93 2R 3823913 3823995 AAGAGTCCAACAATGCCCT 59 3824051 3824070 ACTTCGGAGAAGAGGTTGAG 59 NA Drosophila melanogaster 61 CG12826 FBgn0033207 FBtr0088943 3 1 1 96 2R 3558424 3558505 GGATCTTAAGCAATTGTACTCG 57 3558349 3558368 GCTATCCAAGTCGTAGTAGG 57 NA Drosophila melanogaster 61 CG9454 FBgn0033112 FBtr0300358 3 1 1 76 2R 2767405 2767425 AAGATTCCTAGCTTTACAGCC 57 2767291 2767309 AATATTCGGTTCATGCCCA 57 NA DesignNoJunction Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0086012,FBtr0086008,FBtr0086010,FBtr0302439,FBtr0086009 3 6 6 80 2R 1981444 1981523 CGTATAATGAGTCAACCCGA 57 1981383 1981402 CGTGAGTATGGTTATCTCGG 57 NA Drosophila melanogaster 61 Act42A FBgn0000043 FBtr0086029 2 1 1 88 2R 1903100 1903121 GCGGATAACTAGAAACTACTCC 58 1902879 1902897 TAAAGCTGCAACCTCTTCG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 1 4 4 88 2R 1595871 1596125 GCTAACATAGATCTCAACACTGAG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 3 5 5 80 2R 19469 19547 TGTGTAATCACTTCAGTTGAGG 58 19585 19606 TAAATCAAGGAGATCGTACTGC 58 NA Drosophila melanogaster 61 snoRNA:Me18S-A469 FBgn0086041 FBtr0114317 1 1 1 85 2L 21143856 21143874 CGCAGTGATGTTAAACCTG 57 21143922 21143941 TTACTCAGAGGTAGTGACGA 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U3:22A FBgn0003926 FBtr0077928 1 1 1 60 2L 1432715 1432733 CATCGACGGGTATCATCCT 58 1432757 1432775 GCAAATCATGCAAACACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2528 FBgn0032969 FBtr0300121 3 1 1 92 2L 21981730 21990854 CTTCAGGAAGCTGAAGCAG 58 21981656 21981674 CTTTCCAGCTCCATGACCT 59 NA Nonspecific Drosophila melanogaster 61 His1:CG33846 FBgn0053846 FBtr0091850 1 1 1 60 2L 21506899 21506918 AGTTGAGAAGAAAGTGGTCC 57 21506941 21506959 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31624 FBgn0051624 FBtr0301928 1 1 2 87 2L 21199948 21200215 CAAACCCACAGTTACCAATCG 59 21199881 21199900 GATCATACGCTTGGTGATGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Dap160 FBgn0023388 FBtr0081503,FBtr0301276,FBtr0081504 3 3 3 80 2L 21137682 21137769 GAACAGATCTTGGACAAGGT 57 21137621 21137641 ATCGTCCTTATCAAACGACAG 58 NA Drosophila melanogaster 61 Ugt37a1 FBgn0026756 FBtr0081372 2 1 1 88 2L 20373436 20373455 AATCGACCAACGAAATCGTC 59 20373315 20373335 ATGTATTCCTTAGGATGTCCG 57 NA DesignNoJunction Drosophila melanogaster 61 TotF FBgn0044811 FBtr0081310 1 1 1 122 2L 19912243 19912318 TCTATTTGGCTTCCTGCTG 57 19912139 19912157 CTATCGACCTCTGAGTTGC 57 NA Drosophila melanogaster 61 fs(2)ltoPP43 FBgn0004811 FBtr0081316 3 1 2 83 2L 19794635 19794657 TGTCTACGATCTATATGTTCCCG 59 19793394 19794597 GGAATCACACTTAAGTAGTTGTCG 59 NA Drosophila melanogaster 61 CG13077 FBgn0032810 FBtr0081257 2 1 1 107 2L 19566345 19566366 GATGTGCATTGGATTTATCACC 58 19566434 19566518 AAGAAGGAGAACCCGATGG 59 NA Drosophila melanogaster 61 CG10188 FBgn0032796 FBtr0081283,FBtr0081282 2 2 2 100 2L 19506352 19507499 AGCACTGGAGGTATTTCGAC 59 19506271 19506289 CTGATGATCTCCGTTGCCA 59 NA Drosophila melanogaster 61 tj FBgn0000964 FBtr0301669 2 1 1 60 2L 19465635 19465653 CACCACTTCCACAATCTGG 58 19465677 19465695 CACTACCGTACGAGTTCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 amd FBgn0000075 FBtr0081154 3 1 2 271 2L 19112307 19112803 TTCAGCTGGATCTGCAGTC 59 19113038 19113056 CTGTTACTCTGGTCCGAGG 59 NA DesignRelaxed Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012,FBtr0110886 2 2 2 82 2L 17801746 17801767 CTTTACCTTTCGATTGGATCCT 58 17799662 17801703 CATTGTCACCTCTTCGGTC 58 NA Drosophila melanogaster 61 Ugt36Bb FBgn0040261 FBtr0080910 1 1 1 141 2L 16797201 16797221 GACTTTGGCCTAAGATTTGTG 57 16797380 16797401 GCTTCATCTCATGATAGTTTGG 57 NA DesignNoJunction Drosophila melanogaster 61 jhamt FBgn0028841 FBtr0080859 2 1 1 62 2L 16366513 16366534 CACAATGTGGAAATTCGAAACG 59 16366554 16366639 ATTATCTTTCAGTGTCCTCACG 58 NA DesignNoJunction Drosophila melanogaster 61 CSN1a FBgn0028838 FBtr0080671 3 1 1 60 2L 14763561 14763579 TATACAAGTCTGCTGCCCA 58 14763602 14763621 TTATCGTAGTCGTAACGCCC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6108 FBgn0032498 FBtr0080459 3 1 1 60 2L 13277601 13277619 TATGGTCACCCGTATCCCT 59 13277643 13277661 TCTCTTCGGTGGAACTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ACXE FBgn0040506 FBtr0080416 2 1 1 80 2L 12928709 12928791 CTCATATCGTGGATGTGTATCTC 58 12928830 12928849 ACATGACAGACACCATTCGA 59 NA Drosophila melanogaster 61 CG6287 FBgn0032350 FBtr0080222 3 1 1 114 2L 11152549 11153422 TCGTTGTCCTGAACACTCC 59 11152453 11152471 CCCTCCTTCATGCTCTGAC 59 NA Drosophila melanogaster 61 Ast-C FBgn0032336 FBtr0301761 3 1 2 81 2L 11076969 11076991 CAGGCAATCTATCCCAATATTCC 59 11076845 11076929 TCAAATAGGCGCTGTAAGTG 58 NA Drosophila melanogaster 61 dUTPase FBgn0250837 FBtr0080157,FBtr0080156 3 2 2 64 2L 11011862 11011880 TGGACAAACTGGAGGACAC 59 11011908 11011926 CAGATCCTTGACTCCGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34367 FBgn0085396 FBtr0301049,FBtr0112592 3 2 2 85 2L 10351770 10351788 AGACCCACTATCCAGATGC 58 10350766 10351722 TTGAAACCAAACCTGCACTC 59 NA Drosophila melanogaster 61 CG5384 FBgn0032216 FBtr0080061 2 1 1 88 2L 10312897 10312970 ATTCGAACTTACTTGGTGAGC 58 10312829 10312848 GCATTTATGCCCTCCTTTCC 59 NA Drosophila melanogaster 61 sop FBgn0004867 FBtr0079905 3 1 1 60 2L 9896399 9896417 GTGGAAGGAGATGCCTCTG 59 9896357 9896375 CTTGGACAGGAAGTCCGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cks30A FBgn0010314 FBtr0079799 3 1 1 100 2L 9331098 9331190 AGTTCGAGTACAGACATGTGG 60 9331252 9331270 CTGTACGCCAATTGATCGC 60 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079666,FBtr0079665 3 2 4 94 2L 8428060 8430291 AAATTGAGGTGGATCTCGC 57 8430349 8430367 TTATTCGCATGTAACGGGC 58 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079475,FBtr0079473,FBtr0301767 2 3 5 80 2L 7687916 7687984 CCATTGGACTCCGATAAGG 57 7688027 7688046 CTTAACAACAGCTTTGAGCA 57 NA Drosophila melanogaster 61 CG34380 FBgn0085409 FBtr0112617 3 1 1 80 2L 6201433 6203190 TCGGAAAGGGTTATGAATGGA 59 6203229 6203250 ACTCAAAGACTATTTCAACCGG 58 NA Drosophila melanogaster 61 Cyp4ac1 FBgn0031693 FBtr0079066 2 1 1 80 2L 5264433 5264454 ATAACGAAGAACGTGGTTTACG 60 5264495 5264571 ATGCCATTTGTGATCCGTG 59 NA Drosophila melanogaster 61 CG2976 FBgn0031633 FBtr0077415 1 1 1 101 2L 4830113 4830131 CTGGAGCTTACTGAGAACG 57 4829970 4830050 GTCATAGAGATTAAAGCTGCG 57 NA Drosophila melanogaster 61 CG9663 FBgn0031516 FBtr0077604 2 1 1 80 2L 3297497 3297517 GAACTTAGTGCCGTTATTGGA 58 3297379 3297458 GCCATATGTTGTGTATCCTGAC 59 NA Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089749 2 1 4 150 2L 2741043 2741118 GAATCCCTTGACACCATGAC 58 2741231 2741249 TGGTGAAGGTGAACTCCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG4238 FBgn0031384 FBtr0301068,FBtr0301066,FBtr0301067 3 3 3 80 2L 2029690 2029708 AGCTAAATCCGCAGTTCCA 59 2029752 2029849 ACAGCTGGTTGAAACAGGT 59 NA Drosophila melanogaster 61 CG4785 FBgn0031314 FBtr0077962 3 1 1 134 2L 1165063 1165139 ACAAGGTCTCACTGAAGGG 59 1165236 1165255 TTAGTTCGAAGACCGTAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 Tfb4 FBgn0031309 FBtr0077985 2 1 1 83 2L 1150318 1150388 ACCATGCCACAAACTTCCT 59 1150253 1150272 GATTAAACGCCTCGTACTGC 59 NA Drosophila melanogaster 61 GluRIIC FBgn0046113 FBtr0273244 2 1 1 81 2L 917373 917471 GCTTTGGAAGAAAGGCTCAC 59 917512 917533 GTTTCCTATTGTTCCATACGCA 59 NA Drosophila melanogaster 61 dock FBgn0010583 FBtr0078013,FBtr0078015,FBtr0078014 2 3 3 85 2L 831619 831728 AGACTAACATGGGAGACTATTCG 59 831773 831791 GTACATGTTCTGCTCCACG 58 NA Drosophila melanogaster 61 CG3639 FBgn0031282 FBtr0078010 1 1 1 60 2L 816135 816154 TCGAAATTTCAGCGTCAGAG 58 816177 816195 AATATCTTGCTCAGTGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 1 2 2 80 2L 139951 140129 ATAATGTTTCGTTACGGGCC 58 139890 139908 CACTGAATCGTACTGTGCC 58 NA Nonspecific Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 1 2 6 96 2L 15705 17064 GCTTATCGTAAGACGGCAC 58 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 3 6 6 81 2L 11515 11793 CAGAGGAAACCATTGGTCG 58 11452 11473 GGAATTTCACTCATGTTTACGG 58 NA Drosophila melanogaster 61 GABA-B-R3 FBgn0031275 FBtr0078002,FBtr0078001 3 2 3 101 2L 759460 759479 TCATCACAATCACAGCTCTG 58 759541 759690 CGATAATATCGTTTCTTGCCC 57 NA Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033 3 1 3 104 2L 864783 864885 ATTTAAACGACGGAGCTTCAG 59 864699 864717 CTACTGTTTCCAGCACTGC 58 NA Drosophila melanogaster 61 CG4341 FBgn0028481 FBtr0077949,FBtr0112936 2 2 2 91 2L 952064 952082 CAAGGAGACGGCTATTACG 57 952137 952268 ATCGTAGACGTTGCTTGTC 58 NA Drosophila melanogaster 61 ia2 FBgn0031294 FBtr0301417,FBtr0301416 1 2 2 80 2L 1014602 1014621 CCAGTTTCACTTCCTCTCCT 59 1014476 1014562 TTCACTTTCCTTCTGAAGTCCA 59 NA Drosophila melanogaster 61 Gr22f FBgn0041249 FBtr0077902 3 1 1 127 2L 1755474 1755494 CACGACGATGAAGAGTTAGAG 58 1755305 1755326 GTGATGATCATTTGAAAGCCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 3 6 6 81 2L 2360679 2360697 GCTGCTGTTCATGGAAACC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 CG9866 FBgn0031420 FBtr0077765 1 1 2 126 2L 2376136 2377143 TTAACGACGTGCTTTAAGGG 58 2377232 2377250 TTTCCGGATAAGCTCCACC 59 NA InUTR Drosophila melanogaster 61 Hrs FBgn0031450 FBtr0089751,FBtr0299871,FBtr0089750 3 3 4 148 2L 2740466 2740531 GATGTCACTCCCAAGAATGC 59 2740641 2740660 TTCTCCTTGGTGAACACCTC 59 NA Drosophila melanogaster 61 CG17221 FBgn0031500 FBtr0077654,FBtr0077655 2 2 2 95 2L 3040733 3040802 CATACTGTCTTGCTCCTGC 58 3040861 3040879 TTATGTACAGTCCCGACCA 57 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0077567,FBtr0114527,FBtr0302831,FBtr0077566 1 6 10 80 2L 3500053 3500071 CAGAATTCCGGACTACTGG 57 3499754 3500010 TTGAGGTTGAGTTTGTCCAG 58 NA Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 1 1 1 60 2L 4408576 4408596 GATATCGATGTGGTTCGATGG 58 4408467 4408485 AGGTAGCTATAGCCCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077395,FBtr0077398,FBtr0077397,FBtr0077399,FBtr0077400,FBtr0077396 2 6 6 103 2L 4909614 4909686 ATTCTATGGGTTTCCGCTG 57 4909529 4909547 TTCAAGGTGCTATTCTGCG 58 NA Drosophila melanogaster 61 Rtnl1 FBgn0053113 FBtr0301539,FBtr0301540,FBtr0079040,FBtr0079039 3 4 11 87 2L 5004201 5004626 ATACTCGATCCCAATGCCTG 59 4994956 4994974 CGGATTTCTTCACATCGCG 59 NA Drosophila melanogaster 61 CG33995 FBgn0053995 FBtr0100048,FBtr0100050,FBtr0100049 3 3 3 80 2L 5045912 5046151 TATCGGCGCTAGAAATCCT 58 5046193 5046213 ACATGTACTCGTTGTAGTCCT 58 NA Nonspecific Drosophila melanogaster 61 nompC FBgn0016920 FBtr0300012 2 1 3 91 2L 5360392 5362002 CTACTTCAGTGACGGACCC 59 5362057 5362075 GATTGATGTCCAGGGTGGT 59 NA Drosophila melanogaster 61 CG9109 FBgn0031765 FBtr0100665,FBtr0079224 3 2 2 100 2L 6033999 6034020 ACGGAATGGATTATATGGTGTC 58 6033865 6033939 TAGAAAGCTAGCTCCCTTGG 58 NA Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 3 3 3 102 2L 6616060 6616078 AAAGACGATAAGCGAGCCA 59 6616143 6616223 GCTCGTATTCCTCAAACAGC 59 NA Drosophila melanogaster 61 CG31635 FBgn0051635 FBtr0113410,FBtr0079326 2 2 2 87 2L 6640925 6645981 TGGAAGCAAGTATACCTCGT 58 6640857 6640875 CTAATGGCTGGGTGTTGTG 58 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378 1 1 3 102 2L 6802028 6802046 TACCCATGTAAGTCCGGTC 58 6801894 6801962 GATGCTGTGACGTTCTACG 58 NA Drosophila melanogaster 61 Hrb27C FBgn0004838 FBtr0079347,FBtr0079348,FBtr0301403,FBtr0079346,FBtr0301404 3 5 5 133 2L 6924281 6924301 GTTATCATGTACGACCAGGAG 58 6924396 6924698 TTCTTGATTTCGACCTGCT 57 NA Drosophila melanogaster 61 CG11266 FBgn0031883 FBtr0089634,FBtr0089639,FBtr0089637,FBtr0089636,FBtr0089640,FBtr0089635,FBtr0089638 3 7 7 95 2L 7036636 7036654 ATATTCGAGCCCTTTGGCA 59 7036711 7036820 ATTGTGGTACGTGATAAAGCC 58 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299538,FBtr0299537,FBtr0299539 3 3 3 86 2L 7228751 7228771 CAGTTCTTCGATCGCATACTG 59 7227332 7228703 GCGTTTAATGGGAACCTGG 59 NA Drosophila melanogaster 61 santa-maria FBgn0025697 FBtr0079464,FBtr0079465 2 2 2 80 2L 7447294 7447518 ATCATGCACAAGGAAATGGC 59 7447233 7447252 CAGACTGAGATCAATTGGCG 59 NA Drosophila melanogaster 61 cdc14 FBgn0031952 FBtr0301330,FBtr0301331 1 2 3 80 2L 7805106 7805127 GACAAGCTGAATCAGATCAAGG 59 7804903 7805066 CGATTCCTGTTCGCTATTGC 59 NA Drosophila melanogaster 61 pes FBgn0031969 FBtr0300183,FBtr0114550 3 2 2 84 2L 7988318 7988404 TCCGGGTATTACCTTGTATGAG 59 7988255 7988273 TTCCTCTGATACGCGTACG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 3 8 9 101 2L 8089725 8105702 CTCAATCACTTGATAAGCTGGTG 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 2 8 9 100 2L 8089726 8105702 TCAATCACTTGATAAGCTGGTG 58 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 wol FBgn0261020 FBtr0079614 2 1 1 70 2L 8302782 8302803 GCTCTGTTTCTATCTACTCTCG 58 8302674 8302692 TCTTGTAGAGCACCAGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 RpS13 FBgn0010265 FBtr0100541,FBtr0079724 3 2 2 89 2L 8364197 8364215 AAGAAGGGTCTGACTCCCT 59 8364064 8364083 GATCTTGTTTCCGTTGACGA 58 NA DesignNoJunction Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 2 3 3 118 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674362 8674773 ATCATAGATTCGCGACACG 57 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079899,FBtr0079898 1 2 2 109 2L 9923290 9923374 GCAGTTGAGGATTCTACCCT 59 9923200 9923218 TAGCTACAAAGATCGCGCA 59 NA Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 3 1 1 110 2L 9938625 9938643 TTCTCCCAAGGGACATGTG 59 9938475 9938498 GTGTCCTTGTATATGATCAGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5708 FBgn0032196 FBtr0079956,FBtr0079955 2 2 2 80 2L 10225002 10225021 GCGTATTTCATCTAAGGTGC 57 10224876 10224965 CTCCTAACATAGTATACCTATCACC 57 NA Drosophila melanogaster 61 CG6206 FBgn0027611 FBtr0080030 3 1 2 81 2L 10459503 10459886 CGACAAGTTGATACGATATGGC 59 10459928 10459946 ATAGCACGATGGAGTGGAG 59 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0080101 3 1 2 87 2L 10646476 10646494 ACTCGGTACTTTGGTACCC 58 10646545 10646627 TCCAATTTCCTGTAGCTGC 57 NA Drosophila melanogaster 61 CG17097 FBgn0032275 FBtr0110819 3 1 2 81 2L 10646493 10646512 CCAGCAACTCTCAGAAATGG 59 10646552 10648663 GTATTATCCAAGATGTCCTCCTG 58 NA Drosophila melanogaster 61 CG17098 FBgn0032276 FBtr0080103 1 1 1 118 2L 10653245 10653263 CATACGCCAGGAATCACTC 58 10653495 10653513 ACAATGCACAGTAGTTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 porin FBgn0004363 FBtr0080183,FBtr0100584,FBtr0080182 2 3 3 80 2L 10848457 10848551 CAGTCTGGAAACAAGAACGG 59 10848396 10848417 ATCAATGTTCACATCCGAATCG 59 NA Drosophila melanogaster 61 aub FBgn0000146 FBtr0112793,FBtr0080165 3 2 2 80 2L 10999569 10999589 CCAGGCCATAATGATCATTCC 59 10999442 10999528 CTCAACGTCCTAAAGTCAGC 58 NA Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300537 3 1 4 111 2L 11165641 11165659 GACTGTATGGCACAAAGGG 58 11165401 11165566 CTCGAAGGGAGTACCTCAG 58 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 2 4 4 101 2L 11258906 11258990 GAATACATTCGGCATGGGC 59 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 crol FBgn0020309 FBtr0080262,FBtr0080263,FBtr0080261 2 3 4 82 2L 11799399 11800170 ATACTTTGGCATACAGGCGA 59 11799336 11799354 TGGTTAAGCAAGTGCTCCT 59 NA Drosophila melanogaster 61 CG18787 FBgn0042125 FBtr0080314 1 1 1 63 2L 11999158 11999176 GCAACAACGAGCATTTCGA 59 11999058 11999076 CCATTGAGGCTGGATTCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Aats-thr FBgn0027081 FBtr0080333,FBtr0080332,FBtr0080331 2 3 3 169 2L 12104964 12104982 TTCTCAAGTTCGACGACCC 59 12105115 12105187 GTTGGTGGAGATACCCTCG 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080344,FBtr0080346,FBtr0300567 3 4 5 92 2L 12278911 12282525 CTAAATGGGATGTACCATCCC 58 12298582 12298602 CTTCTTGTTTAGCATACCCAC 57 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 1 3 5 80 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271635 12271653 TGTATGGGACTATTCGGCA 58 NA Drosophila melanogaster 61 CG31771 FBgn0028873 FBtr0080605 3 1 1 163 2L 14042926 14042944 TATGCAACAGTAGTCGTGC 58 14040405 14040423 GTGCGTGTGGTTAAGTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 1 2 2 286 2L 14743257 14743275 TAGAACGCTTTCGACAGTG 57 14743599 14743617 TAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159,FBtr0302158,FBtr0302157,FBtr0302156 3 4 4 80 2L 15266640 15266658 GATCGTAAGCACGAGATCG 58 15266509 15266598 TGATACTAGCAAGTTGTGAGC 58 NA Drosophila melanogaster 61 CycE FBgn0010382 FBtr0080773,FBtr0080776,FBtr0080774,FBtr0080775 1 4 5 106 2L 15730831 15737640 CGATTCAAACGAGGACCCT 59 15730743 15730761 CAACCGATGACAGATTGCC 59 NA Drosophila melanogaster 61 CG31735 FBgn0051735 FBtr0080791 2 1 2 134 2L 15895799 15895876 CGAAATTAACCTGGACCACTG 59 15895972 15895990 GAATGGCGATTGCAGACTG 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090005 2 1 4 80 2L 16177789 16178912 TCAGTTACACGAACAGATTTCG 59 16178951 16178971 TGCAACACAGGATAATGTTGC 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0080876,FBtr0080879,FBtr0100399 2 4 7 168 2L 16483941 16483959 CTAAAGCGCCTTGACATCG 59 16481535 16483810 GCTTGATCGATAGGCATCTG 58 NA Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 3 3 4 87 2L 16692117 16696596 TCGAATAGAACCAGACGTGG 59 16696644 16696664 CTGATGCAGGTAATTGAGTCC 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0080898,FBtr0080895,FBtr0080904,FBtr0080899 2 5 16 80 2L 16769277 16770465 CTAAGCTCATCTACACCTACTCC 59 16770505 16770523 AACGGTTGGTATACACGGG 59 NA Drosophila melanogaster 61 CG6304 FBgn0032624 FBtr0080955 1 1 1 62 2L 17012696 17012714 TATGTTGCCGTGGAAAGGA 59 17012591 17012609 ATGTAGTCCACATTGCGAG 57 NA DesignNoJunction Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 3 4 12 114 2L 17717920 17717941 ATAGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0100316,FBtr0100313,FBtr0100314,FBtr0100315 1 4 12 85 2L 17717899 17717918 CTTCAATCCCAACGATCTGG 58 17716680 17717851 GATAACAACCGTCAAGCGG 59 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0110886 1 1 2 87 2L 17810925 17815581 CAATGAGTCGACGAATATTCGA 58 17810859 17810877 GTAAATGACACCGGTGGTG 58 NA Drosophila melanogaster 61 tup FBgn0003896 FBtr0081111,FBtr0081112 1 2 2 103 2L 18862252 18862270 GTATTAGGGACAAGCGACC 57 18862106 18862185 ATTGTAGCAGGTTCTGAGC 57 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 1 4 4 80 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391897 19391915 CTTGTCAGCTCTTCAGTGG 58 NA Drosophila melanogaster 61 Lectin-galC1 FBgn0016675 FBtr0302360,FBtr0081201 1 2 2 80 2L 19417485 19417504 TTACATTGCTGGTCATAGCA 57 19417546 19417634 CACCAAACGTATTTCCTTCG 57 NA Nonspecific Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081209 2 1 3 285 2L 19437829 19438010 GAGAGTACCCACCATGCTG 59 19436955 19437041 CCGCTTAATCAGATCACGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13083 FBgn0032789 FBtr0081241 1 1 2 154 2L 19487944 19487964 CTAAATGAAGTGGCCTCATCC 58 19488080 19488194 TTGAGGCTCTCGGATTGAC 59 NA Drosophila melanogaster 61 CG10186 FBgn0032797 FBtr0081280,FBtr0302108,FBtr0302107 2 3 6 93 2L 19510636 19510654 CTATCCGGGAACCACTCTG 59 19510128 19510579 TGTGTAGTTCTTGTGCGTG 58 NA Drosophila melanogaster 61 bsh FBgn0000529 FBtr0089320,FBtr0089319 2 2 2 262 2L 19767343 19767750 TCTATCACAAGCCAGCCTG 59 19767099 19767117 TCTGGAACCAGGTCTTCAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG10722 FBgn0032848 FBtr0081335,FBtr0081334 2 2 2 139 2L 20095816 20095834 ATCTGCAGGGTAGCAAGTG 59 20095937 20096018 GTTGTCCTCGTTGTAACGC 59 NA Drosophila melanogaster 61 CG9243 FBgn0032926 FBtr0081498 3 1 2 96 2L 21166944 21167019 GAGTAGATATACAAATGCGACG 57 21166869 21166888 GTGACTAAGTACGAGTTGCA 57 NA Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897,FBtr0100324 1 2 2 80 2L 21634541 21634559 GGCACTGTGGCTATTAAGC 59 21634603 21634737 CCAAGTAGGTCCCTTGGAG 59 NA Drosophila melanogaster 61 Ac3 FBgn0023416 FBtr0085897 2 1 2 80 2L 21640999 21641077 TATTGTCCATTGCAGCTCTG 58 21641117 21641138 GTTCGAAATCATCCTCTAGAGC 58 NA Drosophila melanogaster 61 Cul-2 FBgn0032956 FBtr0085900,FBtr0085899 3 2 2 80 2L 21660048 21660127 CTGCACCAATTGTACATCTACC 59 21660166 21660186 ATTACCGTAGAACGATTCCGT 59 NA Drosophila melanogaster 61 CG2225 FBgn0032957 FBtr0100618,FBtr0085918,FBtr0085914,FBtr0085915,FBtr0085917 3 5 5 86 2L 21666365 21668113 GATCGGAGGTGGTAACTATGG 59 21666299 21666317 ATGCGAAGCATTTCGTTGG 59 NA Drosophila melanogaster 61 CG17018 FBgn0039972 FBtr0085958 2 1 3 91 2L 22354957 22363437 GGAATTATCCTGAATGCTGGC 59 22363490 22363508 CTGTTGATAAGGCACGGGA 59 NA Drosophila melanogaster 61 CG17683 FBgn0040002 FBtr0111298,FBtr0111301,FBtr0111299,FBtr0111300,FBtr0111302 1 5 5 80 2R 19474 19550 AATCACTTCAGTTGAGGTGG 57 19590 19611 CAGTCTAAATCAAGGAGATCGT 57 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 2 3 3 153 2R 1036566 1036584 TCTGCTTCCTTATCACGCA 59 1040333 1040351 ATTCACGCTGACAAGAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG1344 FBgn0027507 FBtr0086034 1 1 1 75 2R 1541380 1541399 GTATGGTCAAATGGAGTGGG 58 1541489 1541507 TTAAGATGTACGGGTGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 2 6 6 85 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591993 1592016 CCAGAATCCTTGTAAATCATCCAG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 2 2 6 168 2R 1982571 2010403 GAATTCTATATCTTCAGGTCGCG 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 1 3 3 98 2R 2884361 2884442 ATGTCCATGACGTACTCGA 58 2884503 2884522 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111079 1 1 59 80 2R 3236477 3245738 TCCAGTACCCATTAACAGATGG 59 3236418 3236437 TTCACACGGTCATTTAGCAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111094 2 1 59 81 2R 3243526 3249237 GATTGGTCATCACAGAGCC 58 3243463 3243481 ATGGCAATACGATCGTGAC 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0089016,FBtr0089019,FBtr0089018 2 3 59 81 2R 3241437 3249236 ATTGGTCATCACAGAGCCC 59 3241374 3241394 CATGGACTCCACAATATTGGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 2 3 59 80 2R 3236477 3244494 CCCATGCCAGTTTATAGATGG 58 3236417 3236436 CTTCACACGGTCATTTAGCA 58 NA Drosophila melanogaster 61 Aldh-III FBgn0010548 FBtr0300477,FBtr0088993,FBtr0300479,FBtr0300480,FBtr0300478 2 5 8 108 2R 3355322 3356623 ACTATGCCGTTGATGTGCT 59 3355232 3355251 CCCAGGCAAGATTTCTTGTG 59 NA Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917 1 1 6 90 2R 3525796 3525814 ACTTTGGGCCTAGTCACTG 59 3525867 3526111 CCGGCAGATCTAATTTCACC 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 1 2 3 152 2R 3613393 3613411 CTGAATTCGTACAGCAGCG 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0088830 1 1 2 110 2R 3677996 3678074 CTTGAGGGAATTATCCTACGC 58 3678146 3678164 GTTGCATTGGGAGTATGGC 59 NA Drosophila melanogaster 61 CG8709 FBgn0033269 FBtr0088815 3 1 2 157 2R 4026650 4026668 GACAAGGAGCCCTTCTACG 59 4026086 4026450 TTGATGTAGCCAGAGGACTG 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 1 2 2 60 2R 4048556 4048574 AGTGCAAGTCTATTGTCGC 58 4048411 4048429 CCGAGCGATTCTTAGAACG 58 NA DesignNoJunction Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 1 3 3 85 2R 4508173 4508247 TTACGAAGCCTTCCATTCGT 59 4508295 4508313 AGTAGCAGTTCACCTTGGG 59 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0100426 1 1 9 80 2R 4553806 4563986 TCGTATTGTGTAATGGACAGC 58 4564026 4564046 GATGATGTCGTAGACAAAGGC 59 NA Drosophila melanogaster 61 CG8170 FBgn0033365 FBtr0088665 1 1 2 83 2R 4909286 4909304 GTCTGCAGGATCTGGACAG 59 4908980 4909241 TTGTGATGTCGACTTTCTCCT 59 NA Drosophila melanogaster 61 ana FBgn0011746 FBtr0088559 1 1 2 97 2R 4961868 4961886 AATACGGCTCCAAATTGCG 59 4961947 4962354 TTCTTGCGCTGTTTCTTCC 59 NA Drosophila melanogaster 61 CG8008 FBgn0033387 FBtr0114598 3 1 2 80 2R 5048394 5048416 CAGTGATATTCCACTACAACGAG 59 5048268 5048356 TCTCAATGGCATTGATTTCCG 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0100119,FBtr0088607 1 2 4 140 2R 5119286 5119304 CGTAAACCGGATACCATCG 58 5118140 5118618 TCCCATCCCACATTAATTTCTG 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 2 3 10 81 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 CG1968 FBgn0033401 FBtr0088595 2 1 2 80 2R 5175400 5175479 ATAAGCAGGATATTTCCGACC 57 5175519 5175539 CTCGAACCTTTAGAGGATGAC 58 NA Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 1 2 2 124 2R 5592560 5592655 GTCTTTAAAGATCACATACGACCC 59 5592738 5592756 GCATAGCGTAGACTCTCCG 59 NA Drosophila melanogaster 61 TER94 FBgn0261014 FBtr0112905 3 1 4 86 2R 5877818 5877837 GATACGAGGGACTTTATGCG 58 5877885 5877985 CAGATCTTCACGCTTATCGA 57 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 2 8 10 85 2R 5993882 5993901 TCTGGCCCTTAACTTCTCAG 59 5993949 5994981 CATCGAACGCCTGTTTAGC 59 NA Drosophila melanogaster 61 RanBPM FBgn0250861 FBtr0100460 2 1 3 129 2R 6322088 6322165 GGAAATGGATGTAGATGTTTCCC 59 6322250 6322272 CTCTTCAGTCATTAGGTTCTCCT 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089348 1 1 26 93 2R 6403147 6403347 CATATCAGATATGAATGTGGTGGAC 59 6403078 6403096 CAAGGTGTCGCTTTAGGTG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089348 3 1 26 95 2R 6403149 6403349 GACATATCAGATATGAATGTGGTGG 59 6403078 6403096 CAAGGTGTCGCTTTAGGTG 58 NA Drosophila melanogaster 61 CG7220 FBgn0033544 FBtr0088218,FBtr0113064,FBtr0088219,FBtr0088216,FBtr0088217 1 5 5 105 2R 6624408 6624428 AACATTAAAGGTTTCGAGGGC 59 6624495 6624577 CGATGAAGGTCACCTCTGG 59 NA Drosophila melanogaster 61 CG11919 FBgn0033564 FBtr0301705,FBtr0100498 2 2 2 96 2R 6768258 6768276 CAAGCAAATGCTCCAGGAG 59 6768334 6768417 GAAGTTCTCCTGAACGTACAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 tou FBgn0033636 FBtr0088094,FBtr0113066,FBtr0088091 1 3 3 179 2R 7467664 7467747 AAATGGAGCTTCATGAGGAC 58 7467439 7467457 TATCGAAGATCTGACGCAC 57 NA Drosophila melanogaster 61 CG9003 FBgn0033639 FBtr0113069 3 1 4 101 2R 7532460 7538331 CATCGATTCGATCAAACATTCC 58 7532380 7532398 ATCCAGGTAGGAGAAGACG 57 NA Drosophila melanogaster 61 Drep-3 FBgn0028407 FBtr0087980,FBtr0087979 3 2 2 153 2R 7943884 7949026 CCTTCAAGATCAAGGACATCAC 59 7949140 7949158 TACTCCTCATCGTCGACCT 59 NA Drosophila melanogaster 61 vis FBgn0033748 FBtr0087944 3 1 2 133 2R 8396491 8397085 TCATCTACAGGTCCGAAGG 58 8396317 8396336 TTCCTCAGTCCCAAATACAG 57 NA DesignRelaxed Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018,FBtr0087876,FBtr0087878,FBtr0300390,FBtr0087879,FBtr0087877,FBtr0087875,FBtr0301490 3 8 8 91 2R 8560539 8560619 AGAGACCTTCAAGGCTGTG 59 8560466 8560484 CGAAACTCGTAAAGTCGGG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 1 4 6 94 2R 9150456 9150474 GAAGTCGATTGTGATGCGG 59 9151027 9151045 TTATCGGATGCCAACAACG 58 NA DesignNoJunction Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299739,FBtr0299740 2 2 6 88 2R 9148387 9150154 GACAGTCTTCCAGGTTACCC 59 9150205 9150223 CGTCCTCCTCGTTGATCTC 59 NA Drosophila melanogaster 61 CG42321 FBgn0259221 FBtr0299758,FBtr0299760,FBtr0299759,FBtr0299761,FBtr0299754 1 5 12 80 2R 9310224 9326126 GTCTCCTGAATACCTATGACGA 59 9310165 9310184 GGTTTATGATACGCCTCTCC 58 NA Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 2 5 5 82 2R 9436513 9436532 TTATGGTGACTCCCATCTGC 59 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273225,FBtr0087618,FBtr0087619,FBtr0301592,FBtr0273226 1 5 15 200 2R 9805406 9809060 AGTTTAAAGACGAACGCGA 57 9804490 9804508 TCTGCAGCATATGGAAACG 58 NA Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 2 4 4 97 2R 10060020 10060099 TGCTGAAGTGTGCTTTCCT 59 10060160 10060178 TTTCAGGAAGTAGGGTCGC 59 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 3 2 2 94 2R 10636930 10636950 CCATAATGTGGTAGGTCAGGT 59 10637004 10637088 CATGACCAGCATTGTTGTAGG 59 NA Drosophila melanogaster 61 CG10151 FBgn0033960 FBtr0087471,FBtr0087472,FBtr0087473 2 3 4 80 2R 10641389 10641505 TGATCACGAGAAAGCAATGAG 58 10641329 10641347 CGATTGTGTTGGATCTCGT 58 NA Drosophila melanogaster 61 CG10249 FBgn0027596 FBtr0087429,FBtr0112929,FBtr0087430 2 3 5 162 2R 10797861 10797879 CGCAAGTCTCCCTATGGAG 59 10793447 10797735 CAATGCAGGAATCTGCCAC 59 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110997,FBtr0110995 1 2 6 80 2R 10834799 10835161 ATGGATTGGGAATTGATAGCTC 58 10834740 10834758 TGTCACATAGGGATCTCCC 57 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414 3 1 2 129 2R 10927548 10927632 TCTACAAGCTGCCCATCAC 59 10927722 10927743 ATGGAGCTCTCCTGATATTTCG 59 NA Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 3 4 6 81 2R 11152374 11152395 AACGACTATATGATTCTGGAGG 57 11152253 11152333 ATACACCAATCTCGAATCCC 57 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 2 4 7 92 2R 11652754 11660560 ATAATGTGTACCGAGGTGC 57 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 Mlf FBgn0034051 FBtr0302149 2 1 5 117 2R 11825268 11825286 GTTCGTACCTGCGAAATGG 59 11824817 11825190 TAAATACGCCAATCTCTTGGAG 58 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302788 2 2 13 125 2R 11850639 11850657 ATACACTCTACGGGTCAGG 57 11848684 11850552 GAATATGTGTCTTTGATGCCC 57 NA Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0302794,FBtr0302796,FBtr0302790,FBtr0302791 3 4 13 80 2R 11846819 11847310 CACCTCGTACTTCAGAGATCC 59 11846759 11846777 AACGAGATGTGAGTGGGTC 59 NA Drosophila melanogaster 61 spin FBgn0086676 FBtr0089593,FBtr0089590 3 2 5 145 2R 12020009 12020027 TTCCTTCATGCTCTCCACG 59 12020136 12020940 AGTTGAACGCAACATCGTC 59 NA Drosophila melanogaster 61 Lis-1 FBgn0015754 FBtr0087236,FBtr0087238,FBtr0087237,FBtr0087241,FBtr0087240,FBtr0087239 3 6 6 135 2R 12070503 12070521 CTACACAGGCCATCGAGAG 59 12070619 12070705 ATCGCGTAATTCAACCTTGC 59 NA Drosophila melanogaster 61 CG7813 FBgn0034133 FBtr0087126 1 1 1 76 2R 12386692 12386710 AAGCACGAGGAGTACAAGG 59 12386468 12386487 TGACGGTAGTATTCCCAGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4945 FBgn0034137 FBtr0087098 3 1 3 82 2R 12457020 12457367 ATTGAATCGTCTAGAGCTTCG 58 12457409 12457429 AGGCACTGTCTTTAACTTGAG 58 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 1 2 5 80 2R 12566523 12566544 ATCTGGACAACATTTATCCCGA 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0087079 1 1 4 80 2R 12646325 12646765 GAAGTTACGCTATCGCCTC 58 12646263 12646281 GACGTATCGAACAGCATGG 58 NA Drosophila melanogaster 61 Dek FBgn0026533 FBtr0100437,FBtr0100438,FBtr0100436 2 3 4 147 2R 12747152 12747174 CGGATATGTCAAAGAGATTCTGG 59 12747280 12747363 CGCAATTAACGCTTTCACTG 58 NA Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603 2 1 8 87 2R 13409395 13411012 TTCCAGAGATTCGGGACTG 58 13408423 13409344 GAGTTTAGGACCTGAAGCG 58 NA Drosophila melanogaster 61 Hsf FBgn0001222 FBtr0110964,FBtr0086782 3 2 4 80 2R 14018829 14018848 AAACACTGAAGGATCTGCTG 58 14018532 14018789 GATCAGAGTCGTTAAACAGACC 58 NA Drosophila melanogaster 61 sbb FBgn0010575 FBtr0301548,FBtr0301550,FBtr0301547,FBtr0086766,FBtr0301549,FBtr0301551 2 6 6 130 2R 14175232 14175640 CAAATACGAAACAACTAGCTGG 58 14175123 14175142 AATATTCCACTCGTCCTCGT 58 NA Drosophila melanogaster 61 CG42351 FBgn0259682 FBtr0299944,FBtr0299942,FBtr0299945,FBtr0299943 2 4 4 144 2R 14646559 14646577 GAGGTGTCCTATGGCAGTG 59 14646370 14646453 CGAAATTGCTTAAACCCTGCT 59 NA Drosophila melanogaster 61 Mctp FBgn0034389 FBtr0110970 1 1 2 107 2R 14656383 14656401 GTAGTCCACCGGAATTGAG 57 14656750 14656951 CACTCAGTCCATTCTTGTCC 58 NA Drosophila melanogaster 61 CG15117 FBgn0034417 FBtr0086594,FBtr0100129,FBtr0086593 2 3 3 81 2R 15010851 15010869 CAAGTGTGGTGATGTGGTC 58 15010726 15010809 TTGGCCACTAATTCAAAGTACG 59 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 3 4 5 95 2R 15024321 15024464 ATCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 3 10 10 80 2R 15298142 15298160 ACAAGGTGGATATGCAAGG 57 15298007 15298099 AATGGAGGACAAAGTGACTC 57 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086450,FBtr0100390,FBtr0100392 3 3 19 90 2R 15361465 15365133 GAGACAAATCTGTTCGATCGA 58 15365184 15365203 GAAAGGTTGAACGTGATGGA 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 1 11 19 81 2R 15360676 15360954 AAACTTTGCGTGTTGGACC 59 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 CG13868 FBgn0034501 FBtr0086298,FBtr0301209 3 2 2 93 2R 16199002 16200535 CCATTGTATGGATCAGTCTAAACC 59 16198932 16198951 ACTGATCAGACTAATCCGGC 59 NA InUTR Drosophila melanogaster 61 CG12484 FBgn0086604 FBtr0273284,FBtr0112775 3 2 4 156 2R 16361410 16361431 CAGGTAAATGTTATGATGGACG 57 16361548 16363430 GATGTGCCAGATCGATACG 58 NA Drosophila melanogaster 61 Hil FBgn0050147 FBtr0086256,FBtr0086255 2 2 2 103 2R 16495332 16495410 ATCACGCATCAGGATCCTC 59 16495247 16495265 CCATTCTTATGCAGCGTGG 59 NA Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 2 4 4 90 2R 16557769 16557787 CGATAAAGTTGAGCTGCCG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 CG30296 FBgn0050296 FBtr0301892,FBtr0113369,FBtr0301897,FBtr0301898,FBtr0113371,FBtr0071528 2 6 15 94 2R 16907281 16907299 TGAATGCCACGAAGAAGGA 59 16907357 16907602 CTGGCGCAGACTTATTTCG 59 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 3 5 5 102 2R 17204056 17204074 ACGATCTTCTACCATCGGC 59 17204137 17204215 TCTACGACATGGATATGATGGG 59 NA Drosophila melanogaster 61 dom FBgn0020306 FBtr0071604,FBtr0071602,FBtr0071603 3 3 4 83 2R 17218960 17218980 ATGGACGGAATTACATTCCAC 58 17219022 17219272 CGTCTCTAGATTTATTTGCGTG 57 NA Drosophila melanogaster 61 Sdc FBgn0010415 FBtr0301557,FBtr0071706 1 2 6 125 2R 17286778 17286796 ATCCGGACTATTCTGGCTC 58 17286080 17286690 TATGAGCTGTGTTTATGCCG 58 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089710,FBtr0089703 2 2 9 95 2R 17399598 17399616 ATTTCCGATTGCGCTTTGG 59 17399674 17399908 GAAGTACTTGACGTAGCCCT 59 NA Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 2 2 2 80 2R 17543804 17543881 GGCAGACATGCAATAACAG 57 17543925 17543943 TAAACATAGCCTCCGTTGG 57 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 3 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG13492 FBgn0034662 FBtr0302445,FBtr0302446 1 2 2 80 2R 17709905 17709989 TGCAATCGTGAGATCTTCC 57 17709843 17709861 ATCCGATTCACAACTGGAG 57 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 2 11 11 87 2R 17998432 17998843 GCCAACCTAAATATCTCGTTAGG 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 GM130 FBgn0034697 FBtr0071789,FBtr0071790 3 2 2 165 2R 18013848 18013869 CTCTCAGAGGTACTGAACTCAC 59 18013649 18013722 TTAAGGCTTTCTGCTCGCT 59 NA Drosophila melanogaster 61 CG13511 FBgn0034759 FBtr0071863 3 1 1 60 2R 18547460 18547480 GCTCTGACCTTGTATATCTGC 58 18547558 18547578 AGTTGATGAAGTAGGGAAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42678 FBgn0261564 FBtr0302775 2 1 13 80 2R 18818619 18818637 GAAGCACTCATTGAGTCCC 58 18818681 18819047 TGGATTTGTCCTGACTTGC 58 NA Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 3 5 5 84 2R 19484768 19484788 CACCAGAAGTTCTCCAATCAG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0113464 1 1 2 80 2R 19900292 19900313 TAGAGTTCAATCCCACCATGAG 59 19900169 19900254 CCCTGAGAATGGTTAGTTTCCT 59 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0072252 2 1 2 110 2R 20007770 20008248 GCGATTGGGATATCTTAACCAG 59 20008318 20008337 AGAACATGCTCGTAGGAAGG 59 NA Drosophila melanogaster 61 CG4622 FBgn0035021 FBtr0300490,FBtr0072344 3 2 2 163 2R 20422602 20422675 CATCGATTCAGGACACCAC 58 20422457 20422475 TAGTTCCTGTGGGTTGTCC 59 NA Drosophila melanogaster 61 pio FBgn0020521 FBtr0301502,FBtr0072312 3 2 3 81 2R 20484167 20484189 TCTCTGGCCTATATGTGAATGAG 59 20484230 20484301 TCGTCCAGAGTCTTCTCCT 59 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0300957,FBtr0300956,FBtr0072414 3 3 6 90 2R 20818308 20818326 CAACTTCAACGTGGCTCTG 59 20818177 20818256 TCTCAACATGAATCGCTTCTG 58 NA Drosophila melanogaster 61 fwd FBgn0004373 FBtr0072516,FBtr0072515,FBtr0072517 1 3 3 80 3L 310167 310285 ATGATTCTGGCATCATCTGTG 58 310107 310126 AATCAAGCGACTCATGTGAG 58 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072543 2 1 6 119 3L 328343 352690 CGTCATGTGTTTCTATCTGC 57 352838 352856 TTAAAGTCACCCAACTCGG 57 NA Drosophila melanogaster 61 Ptpmeg FBgn0035133 FBtr0072545,FBtr0301818,FBtr0072542,FBtr0072544,FBtr0301817 3 5 6 82 3L 352338 352358 TCAGTATCTCGAGTTATCCGA 57 352402 352488 CATCAACCCATCTCACGAC 58 NA Drosophila melanogaster 61 klar FBgn0001316 FBtr0112808,FBtr0072565,FBtr0110818 1 3 4 80 3L 444372 444614 CGAACAACAAGCAGAACTC 57 444310 444331 TATTTCTCTTGGTAGTTGTCCC 57 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112909 1 1 6 145 3L 984147 984165 AGAACTACACGTTCTTGCC 57 984274 985377 ATTGGCATTATCCTCGCTG 58 NA Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 3 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG1140 FBgn0035298 FBtr0072844 3 1 2 151 3L 1964602 1965085 CCATCAAGGCTATTGCGTG 59 1965199 1965218 GATCATCTTCTCCGGAATGC 58 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302682,FBtr0302679,FBtr0302676,FBtr0302678,FBtr0302684,FBtr0302685,FBtr0302683 2 7 12 82 3L 2436162 2436183 ATCAATCATTGCCAGTAGAACC 58 2436226 2439514 GGTGCGCGTTATGAATCTG 59 NA Drosophila melanogaster 61 CG11486 FBgn0035397 FBtr0073003,FBtr0073002,FBtr0072991,FBtr0072998,FBtr0072994,FBtr0073000,FBtr0072992,FBtr0073001,FBtr0113131 1 9 15 80 3L 3083795 3084813 CTCGCCACTTATATGAATCGA 57 3084852 3084873 CAAATTAAGTAGTGAGAACCCG 57 NA Drosophila melanogaster 61 CG32280 FBgn0052280 FBtr0073030,FBtr0073031,FBtr0073032 3 3 3 111 3L 3168164 3168182 GCACATGATCTGTCCATCG 58 3168257 3168344 CAGCCAGCAACCAAATAGG 59 NA Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036 1 1 2 165 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183987 3184260 GCTTCAAGAGTTTCTGAGCC 59 NA Drosophila melanogaster 61 CG11505 FBgn0035424 FBtr0073046,FBtr0073047,FBtr0073045 3 3 3 80 3L 3227695 3227783 TACTTCTCCAGGGAGAACCT 59 3227824 3227844 AGTGTAAATGGGCACATACTG 58 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0110922,FBtr0301948,FBtr0073132,FBtr0073131,FBtr0110923,FBtr0110925,FBtr0110921 2 7 13 128 3L 3588067 3593334 TAACAAACCACAAGACTGGC 58 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 1 4 6 238 3L 4418265 4418283 AGGCGATGTAATTGAGGTC 57 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 2 3 3 149 3L 4551932 4552115 TCATATCGTTCCAAATGGCG 58 4552224 4552245 GTCTACCCAGAAGTATTTGGAC 58 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 1 7 7 174 3L 4596210 4596228 TAAATCCCGCGATGAATCC 57 4595936 4596072 AAAGAACCAGTCTTCGCTG 58 NA Drosophila melanogaster 61 Ubp64E FBgn0016756 FBtr0077096,FBtr0077095,FBtr0077097 2 3 3 80 3L 5753889 5753966 ATCACTTTGGACCAGGACAG 59 5754003 5754027 CATATAGCTCAGTTTGTCTATTGGG 59 NA Drosophila melanogaster 61 Tektin-C FBgn0035638 FBtr0077115,FBtr0113147 1 2 2 67 3L 5788652 5788670 AGGATTTGTCCAAACAGCA 57 5788198 5788216 CAGATTCTCGTACGTCTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10486 FBgn0035647 FBtr0114644 2 1 1 60 3L 5898845 5898865 TCCTACGATACCTGCTTTACG 59 5898724 5898742 ACTTGGGACCCACATACTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 1 2 2 183 3L 5927082 5927164 ACAAGATAAAGGGCTTCACCA 59 5926919 5926937 TACATCTCGAAGTCCGCTC 59 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 2 3 3 82 3L 6088576 6088755 GTGTCCTTTAGTGTGGTGC 58 6088801 6088819 TAGGGCTTCACCACTTCAC 59 NA Drosophila melanogaster 61 CG32392 FBgn0052392 FBtr0076948,FBtr0076947 3 2 2 240 3L 6750545 6750627 ACAGGAAGAATTCCTGGCC 59 6750323 6750341 CTTCTTAACGGCATCGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 mp FBgn0260660 FBtr0301109 1 1 11 80 3L 7012987 7027611 GCTAGGATTCAGGATGATGGT 59 7027749 7027767 ATTCGCTTCCGTTGAATCC 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 3 2 11 162 3L 7042665 7043671 GAATACGAAACGCTACGCG 59 7044342 7044361 TGGTGTCCAGATTCTGTACC 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076906,FBtr0076907 3 2 4 86 3L 7059751 7059771 CACATCAATCTCAAGGATCGG 58 7059819 7059971 TAATCAGTCAGCCACTCCC 58 NA InUTR Drosophila melanogaster 61 msl-3 FBgn0002775 FBtr0076926 3 1 2 82 3L 7118472 7118491 TTCACAAGGGCGAGATAGTC 59 7118292 7118427 GACGTTTAGCACCTTGCTG 59 NA Drosophila melanogaster 61 CG33275 FBgn0035802 FBtr0089850 2 1 3 89 3L 7596576 7596773 CACTGGAGACAGAGCTGAC 59 7596825 7596844 TAAGTCGAAATCGCTCTGGT 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0112699 1 2 15 85 3L 7655388 7656366 TGAAATTGATCCGGTTGCA 58 7655321 7655339 CACTCTCGTCTTCAGTCTG 57 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0300499,FBtr0076776 3 2 7 87 3L 7811310 7846290 CATTAATGGCAAATCCACATCG 58 7811244 7811263 CTCAACATTCCAGATGTCGC 59 NA Drosophila melanogaster 61 syd FBgn0024187 FBtr0076769,FBtr0076768,FBtr0300413 3 3 4 86 3L 7921071 7921089 CTGACCTTCACCAACAAGC 59 7919924 7921024 CATGTCGTTATCGTTTATGCGA 59 NA Drosophila melanogaster 61 Atg18 FBgn0035850 FBtr0076693,FBtr0076692,FBtr0076691 3 3 3 93 3L 8180668 8180922 GAACATAACTTCCCTGGCC 58 8180979 8180997 CGTGTGGTAGATCTTGTCC 57 NA Drosophila melanogaster 61 CG7387 FBgn0035852 FBtr0076723 3 1 1 122 3L 8185523 8185542 GTTCGATTCGGATAAGACGA 57 8185333 8185351 AAGTAGCGCAGCTCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42330 FBgn0259232 FBtr0299840,FBtr0299839,FBtr0299841 1 3 3 80 3L 8270065 8270540 AGCTGTACGAAACCGATCC 59 8270584 8270602 AGTTGGTGTATTTGCGCAG 59 NA Drosophila melanogaster 61 CG32352 FBgn0052352 FBtr0076628,FBtr0076629,FBtr0301035,FBtr0076630 1 4 5 108 3L 8581911 8586580 AACGAGAGTGATCATGAATACG 58 8586649 8586667 GTAAGTCGATGTCCATGGG 57 NA Drosophila melanogaster 61 Tsp66E FBgn0035936 FBtr0076507,FBtr0076508,FBtr0076506 3 3 3 81 3L 8921174 8921193 CCGTCATGTTCTTCATGAGC 59 8921236 8923490 AAGGTTCCATACGTCGACAG 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0076565 3 2 5 120 3L 8927237 8927519 ATGGCCGTTTACCAGTCTC 59 8927135 8927155 GTCCCAGTAGTACATTAGCCC 59 NA Drosophila melanogaster 61 CG5021 FBgn0035944 FBtr0076514,FBtr0076513 2 2 4 114 3L 8960606 8960688 AGTCAAAGAACAGTCGGGT 58 8960766 8960784 AACTTCAGGCCGAATAGGG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 1 5 5 81 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986078 8986097 GCGGTTGTTAATCCTATCGT 58 NA Drosophila melanogaster 61 Tequila FBgn0023479 FBtr0301910,FBtr0076526,FBtr0076527,FBtr0076525 3 4 5 97 3L 9067914 9068167 GATCCTGCTAGTGGATCGAC 59 9068227 9068245 TCCCTGTTGCTGATAAGCC 59 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076535 3 1 3 98 3L 9144599 9144681 CAAGCAAACAGTGATGGGAC 59 9144520 9144538 TTCACCGTATTCTCCAGCG 59 NA Drosophila melanogaster 61 CG42509 FBgn0260235 FBtr0300644 3 1 1 242 3L 9278098 9278116 GACTATTCAAGCGAGTCGC 58 9278558 9278576 ATCTTCTCCGTCTCTTGGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 eIF-4E FBgn0015218 FBtr0076493,FBtr0076491,FBtr0076489,FBtr0076490,FBtr0076492,FBtr0076488,FBtr0076487 3 7 7 91 3L 9393609 9393691 GAACATTCGTCCCATGTGG 58 9393536 9393555 TATCCAGATCGGTCTTGGAG 58 NA Drosophila melanogaster 61 CG3967 FBgn0035989 FBtr0076482,FBtr0076484,FBtr0076483,FBtr0076481,FBtr0076480 1 5 5 80 3L 9410801 9410821 GCAGCAGATAACACAGATCTC 59 9408556 9410759 GCATGAATTATCTCGGCCA 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0301858,FBtr0299606 3 2 3 134 3L 9731333 9731351 GATAACGTCCAGCTGTTCG 58 9730373 9731235 CACTTGACCCTGTCTACGT 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 1 12 12 87 3L 9773789 9773876 CCTCATGAGATCTTTGTGCA 58 9773926 9773944 CATACTTGATCCAACGGGC 58 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 1 7 12 103 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775784 9775804 CTTCATGTCGATCTTGAGCTC 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076320,FBtr0076322,FBtr0076325,FBtr0076326 2 7 12 115 3L 9774311 9775719 GCCTGCAGAATTTGTCTGG 59 9775795 9775816 GTACATATCGTCCTTCATGTCG 58 NA Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 2 2 2 97 3L 10081407 10081905 TGGCATATACCTCCAGTGG 58 10081328 10081346 ACTGACGCTACTGTAGCAG 59 NA Drosophila melanogaster 61 CG6404 FBgn0027615 FBtr0076271,FBtr0076272 2 2 2 159 3L 10877957 10877978 GCGTGCAGTAACTTTATATCGT 59 10877745 10877837 TCATGTTGTCCCAGGACTC 59 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 2 3 3 80 3L 10889924 10889943 ACGACAAGGATGGATTTAGG 57 10889709 10889882 AGGTTACCAAGAGTACCTCC 58 NA Drosophila melanogaster 61 Aps FBgn0036111 FBtr0076250,FBtr0076251,FBtr0076252 2 3 3 80 3L 10889924 10889943 ACGACAAGGATGGATTTAGG 57 10889709 10889882 AGGTTACCAAGAGTACCTCC 58 NA Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 3 4 5 126 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109441 11109459 GGGAGTCTGGAACAGATCC 59 NA Drosophila melanogaster 61 Mob2 FBgn0259481 FBtr0089331,FBtr0089330,FBtr0089333,FBtr0089332 3 4 4 80 3L 11518601 11518687 GGCAACAGAACGTACTTATGG 59 11518541 11518563 CATCACATAGTCGATGTACTGTG 59 NA Drosophila melanogaster 61 CG14133 FBgn0036192 FBtr0300725,FBtr0300097 3 2 3 87 3L 11684200 11684218 CTTTACAGTTGTCCGCTGG 58 11684073 11684149 TGCCTACCGATCAATTCCC 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 1 5 5 115 3L 11694670 11694688 CTACATATGCGCCTTCCTG 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 2 5 5 116 3L 11694671 11694689 ACTACATATGCGCCTTCCT 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CG42630 FBgn0261353 FBtr0302271 1 1 1 170 3L 11702429 11702448 CAAGAAGGTGTCTTCCTAGC 58 11702644 11702662 GAATTGTGGGCATTGGAGG 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 1 1 1 60 3L 12497723 12497741 CGTGAAAGACAATCACGCC 59 12497828 12497849 CATCATCAGGTTCATCAGTTCC 59 NA DesignNoJunction Drosophila melanogaster 61 sowah FBgn0036302 FBtr0300889,FBtr0114610,FBtr0300888,FBtr0300887 1 4 4 80 3L 12558130 12564650 AAGCCAGAGAAGCAATTAATCG 59 12558071 12558090 GACTATCCACTCCTTTGCCT 59 NA Drosophila melanogaster 61 caps FBgn0023095 FBtr0075832,FBtr0111005,FBtr0075833 2 3 3 81 3L 13222210 13222228 AAACTAGCCACGAATTGCC 58 13231801 13244264 GCCGGTATAATCCTTATTTAAGTGG 59 NA InUTR Drosophila melanogaster 61 stv FBgn0086708 FBtr0075806,FBtr0113425,FBtr0075808,FBtr0075809,FBtr0075807 1 5 5 119 3L 13475359 13475377 GAAGGAGTACGCCTACCTG 59 13475458 13475543 TGAATGCATTTGATAGCCTCC 58 NA Drosophila melanogaster 61 Rgl FBgn0026376 FBtr0075793 1 1 4 81 3L 13903681 13907075 ATACCTACACGAAGCCCAC 59 13903618 13903638 ACTTTCTTCAGGTAAACGGTG 58 NA Drosophila melanogaster 61 CG17364 FBgn0036391 FBtr0075788 1 1 2 143 3L 13972299 13972457 AAACCAGGAGTATCCTCCC 58 13972174 13972192 TATCCATTCGAAGTGCCTG 57 NA Drosophila melanogaster 61 cp309 FBgn0086690 FBtr0099993,FBtr0099992 1 2 2 80 3L 15060073 15060616 AATTACTCAGCAGAGAAGTCC 57 15060013 15060031 AGATTTGAGTTGGGTCCAG 57 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075538 3 1 4 111 3L 15818648 15818666 CACTGATCAATAACGCCGT 58 15817074 15818573 AACGCTAGATTGTTGACGT 57 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 2 10 12 134 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914388 16914406 CACAATAGGGCTTCTCGTC 58 NA Drosophila melanogaster 61 Lmpt FBgn0261565 FBtr0302776,FBtr0302780,FBtr0302785,FBtr0302781,FBtr0302779,FBtr0302784,FBtr0302777,FBtr0302783,FBtr0302778,FBtr0302782 1 10 12 133 3L 16914144 16914291 GCAATAAGGTCATCACCTCG 58 16914387 16914405 ACAATAGGGCTTCTCGTCG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075303,FBtr0075302,FBtr0075306 1 3 10 81 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16926098 16926397 GCTGCTTCTGAATTTCGAC 57 NA Nonspecific Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0113428,FBtr0075285 2 2 4 80 3L 17061137 17061155 ATCTAACCAATGGGCAGCT 59 17060461 17061097 CCTGATAGTTGTTCATCACTGAC 59 NA Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075245 1 1 2 141 3L 17332197 17332273 TTTACACGGACTAATTGCTCG 58 17332076 17332094 CGAAGAGGAGTAGCGACAG 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0300520,FBtr0299642 2 2 7 190 3L 17534496 17536615 GTTCGGCGAATGAAGACAC 59 17536919 17536938 GAAGAATGTCCTTCCGTTGG 59 NA Drosophila melanogaster 61 CG3961 FBgn0036821 FBtr0075077,FBtr0075078 2 2 3 83 3L 18880214 18880232 TACTACTTTGCAACGAGGC 57 18874340 18880167 TTGTTCTGGACCCTCTAGC 58 NA Drosophila melanogaster 61 BG642378 FBgn0052203 FBtr0110771 3 1 1 71 3L 19121831 19121852 AGTATAATTCCTTCGATGCCGA 59 19121714 19121732 TATCGTCGAAGTCATCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42636 FBgn0261359 FBtr0302280,FBtr0302282,FBtr0302281 2 3 3 60 3L 19748407 19748428 ATAAAGGGTTATTCTGGCAACG 59 19748307 19748389 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7757 FBgn0036915 FBtr0074891,FBtr0074892 3 2 2 82 3L 19904553 19904574 AAGATAAGCATACGCCAAACAG 59 19904616 19904689 GGTTTCAAGGGCTCATTTGG 59 NA Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 2 2 2 94 3L 19990061 19990141 CTAGCAAGTTTGCAGAGCA 58 19990199 19990217 TGTGACACTTAGTGCACAC 58 NA Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 2 2 2 71 3L 20420614 20420632 GAAGGGCGATATGAAGCTG 58 20420509 20420579 ATCAATGTTTCCAGTCGCG 58 NA DesignRelaxed Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 1 3 3 80 3L 20426898 20426919 GTGTTCATTAAATACCTGCCTG 57 20426959 20427050 AAGGACAGCAATAAGATCCC 57 NA Drosophila melanogaster 61 Psn FBgn0019947 FBtr0078193,FBtr0114517,FBtr0078192 3 3 3 92 3L 20426680 20426753 TATTTGGAAGAGCTTCTTCGC 58 20426807 20426825 CATCATTCCGACCACTCCA 59 NA Drosophila melanogaster 61 CG5059 FBgn0037007 FBtr0078218,FBtr0078216,FBtr0078217,FBtr0078219 2 4 4 81 3L 20508597 20508615 GTTCTCCCGCGAAATTCTG 59 20508474 20508552 CAACCATAGCCCGAATCCA 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 3 2 4 128 3L 20764865 20764883 AATTGGCGACTTTAGCTGC 59 20765715 20765733 GGTCTTGGGACAAGTACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 2 9 18 129 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825956 TTGACTTGTTCCCTCTCGAG 59 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114616,FBtr0114618,FBtr0078332,FBtr0114617 1 4 4 82 3L 20959607 20959683 TATTGATGATGCCGTCGAG 57 20959543 20959563 CACAAGCCAAGTAACTATTCC 57 NA Drosophila melanogaster 61 CG12983 FBgn0037040 FBtr0114618 2 1 4 95 3L 20959004 20959091 GATGCCTTAATGATGAACAAGG 57 20958930 20958948 GGGTACATCCTGTAGTCCC 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297 2 1 4 100 3L 21196402 21196421 ATGCGTATGCTAATGTTGGC 59 21198838 21198856 GATCATGAAACGACGCGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG11307 FBgn0037106 FBtr0301160 1 1 3 155 3L 21612704 21612778 TACTTCCCACTCCGATGGA 59 21612897 21612915 TCAAGTGATGCTCCATCCG 59 NA Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 1 2 2 133 3L 21626118 21626136 TCATCACTGCCCTTCACTG 59 21625927 21626026 GTGCTGTCCATATCATTATACTGC 59 NA Drosophila melanogaster 61 TyrR FBgn0004514 FBtr0301930,FBtr0078479 3 2 2 145 3L 22056137 22056786 CAAAGGTTGCATACAGGTCTG 59 22056891 22056911 CCTCAATGAACTGGTTAACCC 59 NA Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 2 1 1 125 3L 22641779 22641797 GGCCTATATGGATCTCGCA 58 22641944 22641962 ACTTTCTGTTGAACCGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 176 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 121000 121302 TCTTGATGTTGTACTTATCGCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912 2 1 2 96 3R 189435 189453 TACTGGTGGCAGTCTTCAC 59 189512 189951 GATAGCTTTAGCTCCTCGCA 59 NA Drosophila melanogaster 61 growl FBgn0037245 FBtr0078922 1 1 2 191 3R 229171 230204 TCTAGCTCAGCCCATAGAG 57 230359 230438 TTCACCTTGATGTGCTGTG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078808,FBtr0110933,FBtr0273431,FBtr0078810 3 13 19 123 3R 1121452 1121470 CGATGAAGACAAGAAGGCC 58 1120562 1121365 CTCATCTTCCGAGGATCGG 59 NA Drosophila melanogaster 61 Pak FBgn0014001 FBtr0081714,FBtr0114607,FBtr0081715,FBtr0081716 2 4 4 81 3R 2182250 2182268 GTGGTTCGACAACACTACC 58 2182313 2182482 GAGCGATGAACCTGAATGC 59 NA Drosophila melanogaster 61 Scr FBgn0003339 FBtr0081659,FBtr0081657,FBtr0081658 1 3 3 80 3R 2667000 2667019 GCAATGGAAAGAAGAACCCG 59 2651394 2666959 CATTGGCATTCACAGTACTCG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 3 6 11 80 3R 2724255 2734247 GGTAAGTGTCAAGAACGCA 58 2724193 2724214 GAAGTGAAACTCCTTCTCTAGC 58 NA Drosophila melanogaster 61 djl FBgn0037463 FBtr0081631 2 1 1 124 3R 2886665 2886684 GGTCCTACCATCTAAATGCA 57 2886823 2886844 CTTGATCACATGAATCACTCCA 58 NA DesignNoJunction Drosophila melanogaster 61 Alh FBgn0261238 FBtr0300493 3 1 9 113 3R 2927815 2937696 TTTGGCCACCAATTCAACG 59 2927720 2927738 CAGTTACCGCAATGGATGC 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081612 2 1 9 155 3R 2947472 2949643 CAACAAACAAGTTACAAGCTCC 58 2947338 2947358 ACCATCTCCTTCATATCGTCC 59 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0113199 1 1 9 109 3R 2921511 2922022 CATCATCAGTCGCACAGTG 59 2921420 2921438 CTGGTACTGCTATGACGGG 59 NA Drosophila melanogaster 61 lap FBgn0086372 FBtr0302184 3 1 3 123 3R 3023369 3024058 AAATTATATGCAGGGAATGCCG 59 3024142 3024160 GATGCCCGTTGCATTACTG 59 NA Drosophila melanogaster 61 CG14605 FBgn0037486 FBtr0081602,FBtr0081600 3 2 3 83 3R 3045193 3045272 CTTTCCACCATGATACTGTGC 59 3045130 3045148 GATGAGAGTGGGCAGAGTG 59 NA Drosophila melanogaster 61 alpha-Est9 FBgn0015577 FBtr0302354 1 1 2 80 3R 3322496 3322517 GTTACAGTCCGGATTATTTGCT 58 3322383 3322455 ACAGAAATCCCAGTGGTCC 59 NA Drosophila melanogaster 61 alpha-Est3 FBgn0015571 FBtr0300496,FBtr0081545 3 2 2 95 3R 3365220 3365299 AAAGCGTACTGTGAGTACG 57 3365143 3365161 GTATGTGGAAGCACTGGAG 57 NA Drosophila melanogaster 61 CG18748 FBgn0042105 FBtr0113344,FBtr0113345 2 2 2 81 3R 3612901 3612982 ATAACTCTGTTTCACAGGTTCC 58 3612841 3612859 GTTAGAGGATCCGATCGGA 58 NA Drosophila melanogaster 61 pyd FBgn0003177 FBtr0112823 3 1 8 81 3R 4663428 4664128 ATGTCCGAGTCTAAGTTCCC 59 4663366 4663385 AACAAGCTAACTTGCATGGC 59 NA Drosophila melanogaster 61 MED6 FBgn0024330 FBtr0082162,FBtr0301872,FBtr0082161,FBtr0301873 2 4 4 81 3R 5592946 5592966 CCCTTCTATGATCACATGTGC 58 5592831 5592903 GACCGATCATGTTGTGCAG 59 NA Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 1 1 1 63 3R 5642489 5642507 ACAACATCGGACAAGTCCT 59 5642372 5642391 ACGAATAACAGATGGATGCC 58 NA DesignNoJunction Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 2 3 4 85 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122529 TTTCAGGGTAATCGAAGCC 57 NA Drosophila melanogaster 61 Rfx FBgn0020379 FBtr0082238 3 1 2 93 3R 6191845 6197884 CATTACCGTGACGGTTTCG 59 6191695 6191788 CATTTGCGTCTGGCTTGAG 59 NA Drosophila melanogaster 61 Csk FBgn0259217 FBtr0300546,FBtr0300548,FBtr0300549,FBtr0299728,FBtr0300547,FBtr0299729 3 6 6 83 3R 7460832 7460850 CAGACATGTGGAGCTTTGG 58 7460706 7460787 CATCGGCTAATGGAATTCTGG 59 NA Drosophila melanogaster 61 HisCl1 FBgn0037950 FBtr0082471,FBtr0082472,FBtr0301826,FBtr0082470 2 4 4 81 3R 7613660 7613754 AGGAGTCTATGACCTATGTGAC 58 7613796 7613814 CTCATGTTCTCAGGCAACC 58 NA Drosophila melanogaster 61 CG8774 FBgn0038136 FBtr0082740,FBtr0082741 1 2 2 80 3R 9125274 9125295 CAGATGAAGGATAAGCTTGTGG 59 9125335 9125488 CGTCGTAGAAATGGTTCTGG 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 1 9 9 80 3R 9504343 9504363 TACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 CG42542 FBgn0260659 FBtr0301102,FBtr0301104,FBtr0301101,FBtr0302324,FBtr0301103 3 5 6 124 3R 11024865 11024946 TACAGAGCAACTTGGACGT 59 11025032 11025052 GGTAAACGCATCGATAAAGGT 58 NA Drosophila melanogaster 61 CG14866 FBgn0038315 FBtr0273405 3 1 2 141 3R 11142531 11142621 ATTACGTCTTGAGCCAAGG 57 11142726 11142744 TAGATATTGTTGCCGGGTC 57 NA Drosophila melanogaster 61 CG5044 FBgn0038326 FBtr0083090,FBtr0083091 3 2 2 165 3R 11183847 11183865 CTGCAGAAGTACCATTCCC 57 11183994 11184276 ACATCTTCGAGAGCGTCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14869 FBgn0038341 FBtr0083159,FBtr0083160 3 2 2 80 3R 11271112 11271131 CACAGTTCTGTGACAAGTCC 58 11270984 11271069 TCACAGTGAGATTGAGGCG 59 NA Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083209,FBtr0083205 3 2 8 90 3R 11780850 11780868 TCTCACTGATCATCCAGGC 58 11780920 11782599 TTAAATGCCAGAGCATCTTCG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 1 7 9 80 3R 12119858 12122387 ATGATAGCGAAACAACTTCTCC 58 12122427 12122446 GTTCTCTGGTTTCACATCCC 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555 2 2 7 260 3R 14000712 14000730 CTATTCTACACGCCACCCA 59 14001240 14001333 GACAGCAAACATATTGATCGC 58 NA DesignRelaxed Drosophila melanogaster 61 l(3)05822 FBgn0010877 FBtr0083596,FBtr0083595 3 2 2 170 3R 14115625 14115643 GACATCAAGGTGCCATTGG 59 14115415 14115491 AACCAATTCGTTCTCCTGC 58 NA Drosophila melanogaster 61 WRNexo FBgn0038608 FBtr0302307 3 1 2 101 3R 14191327 14191406 TACTCCAGATGTGAAGACTGAG 59 14191247 14191265 TCCTCTGCCATTGAACGAG 59 NA Drosophila melanogaster 61 CG31219 FBgn0051219 FBtr0113400 3 1 2 99 3R 15476812 15476993 ACGAATTCTGACTGCTATCC 57 15477053 15477073 CATACTCCCTCATCAAAGTCC 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100127 3 1 7 146 3R 15579575 15583548 TGGCACAGATAATAAGGCCA 59 15586034 15586054 TGGATATCGTCGAACTTGAGG 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302670 3 2 8 81 3R 16146584 16147205 CTGAACGTGAAGGATTTGGAC 59 16147248 16147266 ATTCGGATTCCGACTCCAG 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 2 5 5 117 3R 16396361 16396821 GATGTCGACAGGTAAATCCTC 58 16396900 16396918 GACTCCACGCTGTTAATGC 59 NA InUTR Drosophila melanogaster 61 bon FBgn0023097 FBtr0300617,FBtr0083912 2 2 2 80 3R 16419703 16419721 AACCTCGTCATTGAGCTCC 59 16419764 16432019 GAAGAGTTTGACTCCGACCT 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084072 1 1 22 80 3R 17188587 17200796 ACACAGAGGCTCAAGATCG 59 17188525 17188543 GAGCAGCAAGACTGAACTC 58 NA Drosophila melanogaster 61 CG7907 FBgn0038887 FBtr0113262,FBtr0113261 3 2 2 95 3R 17231524 17231542 GTGTTCACCCAGAACTGTC 58 17231598 17231708 AACCAAATCCTTGAAGACAGAG 58 NA Drosophila melanogaster 61 Eip93F FBgn0013948 FBtr0112874 2 1 2 94 3R 17786620 17821251 CATATTGTGGCCCTAGAACG 58 17821308 17821326 ATATTCAAGTGGCTGCACG 58 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0084217,FBtr0084218 1 2 3 80 3R 18209066 18209139 GCTTATGCAACACGAATTTCC 58 18209181 18209199 TCTATCATCAGTTCCGGCG 59 NA Drosophila melanogaster 61 CG31158 FBgn0051158 FBtr0302186,FBtr0302187,FBtr0113395,FBtr0113396,FBtr0300791 3 5 5 80 3R 18430299 18430377 CAGCAGCTTTAAGAAGACTCC 59 18430417 18430437 AAATACAGCACAAGATCACGC 59 NA Drosophila melanogaster 61 CG6726 FBgn0039049 FBtr0084349,FBtr0084348 3 2 2 88 3R 18917605 18917623 AAGTGGGAGAACAACGAGG 59 18917675 18917787 GTGCAAACGGTGTAATCCA 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 2 7 7 94 3R 19013515 19013606 TCTTCCAGTACCTACGGGA 59 19013439 19013457 TGGTAGCAAGTAGACGGAG 58 NA Drosophila melanogaster 61 CG4449 FBgn0039065 FBtr0301088 2 1 2 171 3R 19076468 19076489 CGGTCATCGTTAAATAGGTCAG 59 19076253 19076337 CATTGTTCTGAATGCTTGGC 58 NA Drosophila melanogaster 61 pnt FBgn0003118 FBtr0089715 1 1 3 157 3R 19118392 19119580 TAGTTCAGGCTACAACACCA 58 19118254 19118272 TGTTGCTTTGCTGTACAGC 59 NA Drosophila melanogaster 61 CG17380 FBgn0039077 FBtr0299867 2 1 1 123 3R 19229342 19229360 ACTTCTACGGCACTCAGAC 59 19229184 19229205 CACCGTAGATAAATTCTACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0300572,FBtr0084581 3 2 3 94 3R 19977632 19977652 CATCGGAATGGAGTAATAGCG 58 19977482 19977579 TGTATTGATTCTCTGTTCCACG 58 NA InUTR Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0100518,FBtr0100519,FBtr0100516 1 4 7 108 3R 19982893 19982993 GTTTATATCGTGTCGCCCG 58 19982803 19982821 TGTCTGATCTTCCACTGGC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 5 6 81 3R 20045867 20045948 TAGAGATTACTGGCTGCGT 58 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 CG6364 FBgn0039179 FBtr0084602 3 1 2 102 3R 20116720 20116740 TATATGACCTTCGTAAAGCCG 57 20116865 20117242 CAATGGCAACTGTGTTGTC 57 NA Drosophila melanogaster 61 CG5768 FBgn0039198 FBtr0084620 3 1 2 80 3R 20212191 20215373 AATGATAGACAGCATGGGCT 59 20212130 20212148 GTGCGCTGGAAGTATTGAC 59 NA Drosophila melanogaster 61 nAcRbeta-96A FBgn0004118 FBtr0084682,FBtr0084681 3 2 2 81 3R 20340085 20340103 CTGTATGTGCCATCTGAGC 58 20339965 20340043 TCAGAGTTACTTCATAGTTGCC 58 NA Drosophila melanogaster 61 CG11857 FBgn0039303 FBtr0084814,FBtr0273256 3 2 2 135 3R 21085147 21085227 TCTCACAGACCTACCAATCC 58 21085325 21085343 GCATAGCACACGATGTACC 58 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 1 2 2 136 3R 21108535 21108620 AAGAAATTCTACGCTGCCC 58 21108720 21108738 TTCCTATAGCAGGCATCCT 57 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 3 4 4 96 3R 21448152 21448170 GAGTCTACCAGGGATTCGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 CG4673 FBgn0039348 FBtr0300729,FBtr0300730,FBtr0084893,FBtr0084892 1 4 4 80 3R 21448136 21448154 CGATCAATATTCAGCCGGA 57 21448014 21448094 TCCAACCAATCTTCTTCAGTC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 1 6 6 80 3R 21475206 21475291 ACCACAGTGTTAGGGATTCC 59 21475333 21475352 ATTGGGCATTTCTCCATTCG 59 NA Drosophila melanogaster 61 LpR2 FBgn0051092 FBtr0113387,FBtr0084928 3 2 7 161 3R 21539672 21544127 CGGATTGGAATCAACTTGCA 59 21539345 21539366 TTACACATGAACATCAAGGAGG 58 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290141 1 1 5 92 3R 21736983 21737001 CATCATAAAGGGCACCCTG 58 21737056 21737134 AGTGTAAATTCAGGCCACTC 57 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882 3 1 2 178 3R 22750975 22761692 TCAACGAAGCCATCATATCCT 59 22761831 22761850 TGGCGATGATAATGAAGCAG 58 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 1 3 3 80 3R 22981782 22981868 GCCTACGATAGAGGCTTGG 59 22981909 22981930 GAAGTTGTACAGCTGATTCTCC 59 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 2 3 3 80 3R 22981220 22981298 AACCCAGTGTGCTTATTGG 58 22981342 22981360 CATTGTTATCCGCCATGGT 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 1 5 5 124 3R 23101498 23102023 ACATGACGGTATTTGGGCT 59 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 3 5 5 125 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA InUTR Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 2 2 2 81 3R 23455226 23455303 AGATCGGATGTTATCCTGGTC 59 23455346 23455364 ACACAAAGATGATGCCCGA 59 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 1 4 4 158 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463920 23463939 CACGCTGTAGCATATCAGGA 59 NA Drosophila melanogaster 61 betaTub97EF FBgn0003890 FBtr0085261 2 1 2 102 3R 23795149 23795168 CATCTGCTATCAGAGCTTGC 58 23794902 23795086 GGACATTGTGACGTTAATGCT 59 NA Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 3 1 1 70 3R 24109732 24109750 TAACAACTGCTAGTTGCGT 57 24109842 24109863 TGGTATATTGTCAAACCTTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 Vha100-1 FBgn0028671 FBtr0085377,FBtr0301651,FBtr0301650 3 3 10 100 3R 24959594 24959612 CGTAAACCAAACGACCGAG 59 24959676 24960289 TCTCCATGTAACCGAGCTG 59 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0110981 1 1 5 82 3R 25245686 25250157 TATTATCGAAACGCGGGAG 57 25250202 25250221 GATATGACGTCGCATTTGTC 57 NA Drosophila melanogaster 61 Tace FBgn0039734 FBtr0085551 1 1 2 80 3R 25827418 25827554 ATCTCCTGGAGGTCTTCTC 57 25827598 25827616 CTTCGAACTTGAGATCGGT 57 NA Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 1 4 5 81 3R 25857057 25857154 CCATCTACAGATTCTTGCGC 59 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 3 5 5 82 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871274 25871292 TGGGCATCAGATACTGTCC 58 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597 1 1 2 107 3R 25907949 25907967 AAATACGGTGGCTACTGCT 59 25908036 25945863 CGGAATCGTCATCCTTATGAC 58 NA Drosophila melanogaster 61 CG31524 FBgn0051524 FBtr0085684 2 1 2 81 3R 26339730 26339749 CTCCTTCATTCGTCACATGC 59 26339616 26339689 ATTCAACTCATCACGAATCACG 59 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 3 4 4 226 3R 26750075 26750093 CATATCAAGTTCCGGGCAC 58 26750283 26754869 TCTTGAACCACACCCTGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1815 FBgn0039863 FBtr0085822,FBtr0085823,FBtr0085824 3 3 3 80 3R 27502874 27502962 ACGCTTTAATATTCCTTTGCCC 59 27503002 27503021 GGTACTTGCTTCTGATGCTG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 1 3 6 80 3R 27554138 27554159 AAACGATCAAAGAACTCCAAGG 59 27554199 27558658 GGCCTTAGTAGGAGTAACGG 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 1 3 6 80 3R 27554138 27554159 AAACGATCAAAGAACTCCAAGG 59 27554199 27558658 GGCCTTAGTAGGAGTAACGG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 3 22 22 81 3R 27677891 27678328 TTTAAGCAACATTCCCTCATCC 59 27677831 27677852 GAATGCCTTAACTTCAAAGCTG 58 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 RpS3A FBgn0017545 FBtr0089177,FBtr0089175,FBtr0089176 1 3 3 80 4 87356 87475 ACAAGTACAGGTCGATGGT 58 87294 87313 AGAGGTACCCATCTACAGTC 57 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 2 6 6 83 4 139394 139473 TTCATTTAGGGTTTCTGGTGTC 58 139332 139350 TAATGCGCACACCATTGTG 59 NA Drosophila melanogaster 61 CG32000 FBgn0052000 FBtr0113417,FBtr0089449,FBtr0089448,FBtr0089451 1 4 8 80 4 162687 162707 ATATCCTCTACGCCATTAGCA 58 162747 162839 CAGATGAACCCAACAAGTCAC 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 1 2 6 89 4 352620 363557 GCAAACACAATTGCGTGTG 59 352549 352569 CGTAAGCTATGTAAGCTGTGC 59 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0089236,FBtr0100395,FBtr0089235,FBtr0100396 3 4 4 81 4 738484 738502 TGACTGACAGCCCTAACAG 59 738544 739909 TTAATGGTACTGACTGAGGGAC 59 NA Drosophila melanogaster 61 ey FBgn0005558 FBtr0100396 2 1 4 97 4 725813 725831 CAACTGCTATAGGCACCGT 59 725890 728128 AATCACATTGTCCTTGTGAGC 59 NA Drosophila melanogaster 61 Sox102F FBgn0039938 FBtr0100600,FBtr0089252 1 2 2 80 4 822725 823031 AAAGTCATGGGAGAGTGTGG 59 822664 822684 TTACTGAGTCACGACTCACTC 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300885,FBtr0300886 2 2 5 145 4 886674 886692 CTTGTTCGATCGGAACTGC 59 886489 886566 CAGGACGAGAGTTATTGCCA 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 3 6 7 121 4 1081128 1081146 AAAGTTGCGAAGCTAGTCG 58 1080449 1081043 CTGCTTGATGGAACCTGAG 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089216,FBtr0089212,FBtr0089210,FBtr0089215,FBtr0089211,FBtr0089213 1 6 7 80 4 1081083 1081104 GCATCAGTAAAGAGGAGATTGG 59 1080448 1081043 TCTGCTTGATGGAACCTGAG 59 NA Drosophila melanogaster 61 CG41367 FBgn0085633 FBtr0302235 1 1 1 60 U 2759808 2759826 ACACTTCATGACAGTACGG 57 2759712 2759732 CTGGTTTCATAGTAACAGCCA 58 NA DesignNoJunction Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100577,FBtr0100579,FBtr0089442,FBtr0089441 3 4 8 169 X 165636 166463 GATGTTGATTACACCACGCA 59 165424 165442 GTTTGAATGGTAGCACCGC 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100578 1 1 8 102 X 165906 166470 GCTCAGCGATGTTGATCTG 59 165634 165840 TTTGCGTGGTGTAATGTGG 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100579 3 2 8 131 X 165185 165204 GTCTCTATGTACCAGTCGGT 58 163390 163473 CATTCTCCACAGATCAAGGG 58 NA Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 2 3 3 80 X 528200 528221 GAAGTTGCTAATCATACAAGCC 57 528073 528161 GTCACGTCTATCCTAAAGAGC 58 NA InUTR Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 2 6 6 300 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284576 1284594 TTTCGGTAATCCCGTTGCT 59 NA DesignRelaxed Drosophila melanogaster 61 CG32809 FBgn0023531 FBtr0089814 3 1 2 186 X 1575671 1575689 GTTCCTCAAAGAAGAGCCC 58 1574133 1575442 CCAGTTAAACTTGTCGGGC 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 2 3 4 80 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643785 1643806 CATAATTATCGCTTGTCCGGAC 59 NA Drosophila melanogaster 61 MED18 FBgn0026873 FBtr0114454 1 1 2 96 X 1760089 1760107 ATGAACAACCGCTTCTTGC 59 1760167 1760232 GGTAGGCGGTTAGACTGTG 59 NA Drosophila melanogaster 61 CG3600 FBgn0026087 FBtr0299593,FBtr0070322,FBtr0299592 1 3 3 86 X 1861945 1861963 GAAACGCCAGACTTATCCG 58 1862013 1870613 CTGGCATGTCACATTCACC 59 NA InUTR Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327 1 1 2 86 X 1947331 1947863 TATCCAAGAATTTACCAGCGAC 58 1947908 1947928 CCAGGTGGGTATCATTATGGA 59 NA Drosophila melanogaster 61 CG2918 FBgn0023529 FBtr0300792,FBtr0070411 1 2 2 90 X 2167972 2168066 TTGTATAGGAAACGCTTCCCA 59 2167902 2167920 AGAATTCATCGGTGTCGCT 59 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 2 3 3 80 X 2243027 2243045 TAAGCTCTTGTCCCTCGTC 58 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070520,FBtr0070519 1 2 12 178 X 3208476 3208494 TGTGCTCCGATCTAATGAC 57 3208636 3215086 TTCTACATCGAAACTGCCC 57 NA Drosophila melanogaster 61 tlk FBgn0086899 FBtr0299583,FBtr0299581,FBtr0112680,FBtr0299580,FBtr0301659,FBtr0299579,FBtr0112681,FBtr0299582 3 8 8 80 X 3679517 3679634 GGGAACCTACTGGTATCTGC 59 3679676 3679695 CATACGTCCACTTTGGAGGA 59 NA Drosophila melanogaster 61 Rnp4F FBgn0014024 FBtr0070752,FBtr0112876,FBtr0070753 3 3 4 80 X 5214531 5214604 CGCCAAATAATGGGCTATCC 59 5214470 5214491 ATTGTATTCGCTTTCCATCTGG 59 NA Drosophila melanogaster 61 RhoGAP5A FBgn0029778 FBtr0070785,FBtr0070784 3 2 2 193 X 5511812 5511901 ATCACTTCAAGGTGCACAC 58 5511637 5511655 CAGATCCGTGCCAAATACG 59 NA Drosophila melanogaster 61 RpL35 FBgn0029785 FBtr0070800,FBtr0070801 3 2 2 118 X 5567092 5567112 ATGAGCTCAAGAATGAGTTGC 59 5567273 5567292 CATCACAATGTAGACGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5921 FBgn0029835 FBtr0070869 2 1 2 157 X 5956030 5956049 TTATGGACGAATTCAAGCGG 58 5956169 5956884 CTGAGTGCGGAACTTTGAC 59 NA Drosophila melanogaster 61 CG33692 FBgn0064121 FBtr0091674,FBtr0091675,FBtr0091676 2 3 3 75 X 6773791 6773809 TACACATGGTCAGCCATCG 59 6773848 6773866 ATACCATGGATGCACCCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375 2 2 7 124 X 8117880 8117899 GTCCGTGAACCAAGATAACG 59 8118075 8121916 CATTCCCATTGAGCTGTGG 58 NA Drosophila melanogaster 61 sdt FBgn0243505 FBtr0089974,FBtr0100376,FBtr0089977,FBtr0089978 2 4 7 151 X 8117890 8117997 CAAGATAACGGTCCACACC 58 8118849 8118867 AAAGCTGTGATTGTGGTGG 58 NA Drosophila melanogaster 61 CG33181 FBgn0053181 FBtr0113452,FBtr0113453,FBtr0113455,FBtr0113454,FBtr0113451 2 5 5 80 X 8408692 8409227 TCTGCATAAGTGGTCTGGG 59 8409270 8409289 TGATCGGTTGAAACACTACG 58 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 1 2 2 92 X 9783063 9783081 CATATACGACACAAGCGCG 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 ras FBgn0003204 FBtr0071496,FBtr0071494,FBtr0071495 3 3 3 86 X 10641029 10641047 CAACTCCGTCTACCAGGTG 59 10641097 10641528 CGTGTTACCACATTGCCAC 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 3 8 10 96 X 10692567 10692661 CGAATAAGGGTGAAATTTGCC 58 10692491 10692510 TGCATGATCCGTTTAATGGT 58 NA Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0112978 2 1 2 184 X 10812539 10813874 GAGTACCAGCAGGTAACCC 59 10814022 10814040 TAGTGTCCCTGCATCAAGC 59 NA Drosophila melanogaster 61 Gs2 FBgn0001145 FBtr0073494,FBtr0073496,FBtr0073495 2 3 3 237 X 11322867 11322885 CAGGGACCCTACTATTGCG 59 11323198 11323281 TGGACACAATGCCAAACTC 58 NA DesignRelaxed Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0273235 2 1 4 105 X 11567399 11567417 ATATCTGCATCCACCAGTG 57 11567486 11569373 CCCTCGTCATCTTCATAGC 57 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0300202,FBtr0300204,FBtr0299860 1 5 7 80 X 12090585 12090604 ACAAGCTGAAGTACGAGGAG 59 12090642 12091227 GAATATAATCCTTCTGCAGCTGAC 59 NA Drosophila melanogaster 61 Pkcdelta FBgn0259680 FBtr0299936,FBtr0299937 1 2 3 80 X 12331013 12344328 ATGCGAAGAATGTGACGTG 58 12344370 12344390 ATGAGTTTCTGATTGACACCG 58 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 3 3 3 135 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466537 12466555 CTTCACCTTGACCTCCTCG 59 NA DesignRelaxed Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736 1 1 4 82 X 13097796 13097814 TAGCAGGGAGAAACGTAGC 59 13094927 13097751 TGCATAACTCACCGTTACCA 59 NA Drosophila melanogaster 61 NFAT FBgn0030505 FBtr0301451,FBtr0301449,FBtr0112980 2 3 5 82 X 13539829 13543422 GTAATTTCGGCATGAGAATGAC 58 13543465 13543483 CGATGGTATGCGAAATCCT 57 NA Drosophila melanogaster 61 Ste:CG33240 FBgn0053240 FBtr0300089 3 1 1 60 X 13950348 13950366 AGTGAACTGGCAACATGTC 58 13950249 13950267 AGGAACCAATCGATCCAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 mud FBgn0002873 FBtr0073906 2 1 3 109 X 14150123 14150526 AAGATCTCAAAGACGGACCC 59 14150598 14150616 AGGTCGTTTGTAGTGGGTG 59 NA Drosophila melanogaster 61 eag FBgn0000535 FBtr0111009 2 1 2 117 X 14894754 14894772 TCCAAATTTCGTCGCACTC 58 14894853 14896157 TGGCTGGTAGCTTAGTTCG 59 NA Drosophila melanogaster 61 CG15032 FBgn0030626 FBtr0112986,FBtr0074003 2 2 2 108 X 15200611 15204427 ATCTGGAGAACATGGAGGG 58 15204497 15204517 TCAAAGTAGGGAATGTCTTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0074119,FBtr0301597,FBtr0074122,FBtr0301594,FBtr0074123,FBtr0301595,FBtr0301596,FBtr0074124,FBtr0074121,FBtr0111036,FBtr0074118,FBtr0111037 3 12 12 96 X 15789538 15789556 GCAGATGCTCACTTTGGAG 58 15789613 15789704 CTGAATCATTTGGAGCATAGCT 59 NA Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 2 3 3 148 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888311 15888392 TGGTGTAATGGGTCTCGTG 59 NA DesignRelaxed Drosophila melanogaster 61 exd FBgn0000611 FBtr0074137,FBtr0074136,FBtr0074135 3 3 3 149 X 15888181 15888199 TTGAGCATTCCGACTACCG 59 15888312 15888393 TTGGTGTAATGGGTCTCGT 58 NA DesignRelaxed Drosophila melanogaster 61 vap FBgn0003969 FBtr0074141,FBtr0074143,FBtr0074142,FBtr0074140 3 4 4 81 X 15896970 15896989 TCCAAATACGGTGTTTCCCT 59 15896735 15896926 TCCTGGTCCAGCTTTAACC 59 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 3 4 4 80 X 15975869 15975889 CAAATGAACTTTCCGTGTGGA 59 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 eas FBgn0000536 FBtr0074213 3 1 5 80 X 16174014 16175021 TAAGAAGAATGTTCGTCAGACG 58 16175059 16175080 GAATTCAATTGGTTCTGGACCT 59 NA Drosophila melanogaster 61 Sep4 FBgn0259923 FBtr0074369 1 1 7 119 X 16588401 16588668 AGCACTAGATAAGCATGTTGTC 58 16588303 16588321 CTTGTGTTGCAAGTTGCAG 58 NA InUTR Drosophila melanogaster 61 if FBgn0001250 FBtr0074357,FBtr0301354,FBtr0301353 1 3 4 93 X 16654995 16655013 TGTCAGGCTGGATTCAGTG 59 16652610 16654370 AGTAGGTTTGTCCTTGCCA 58 NA Drosophila melanogaster 61 CG9132 FBgn0030791 FBtr0074354 3 1 2 178 X 16693604 16694569 CGTGGTTATAGAGCGGGAG 59 16693444 16693462 CTATCTGAAACCGCCTCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584,FBtr0299585,FBtr0074413 2 3 3 80 X 16870115 16870133 TTTCTAGTCGCACCTGACC 59 16869872 16870073 CTCGTATACGTGATGTCTGGA 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 2 3 3 168 X 17357767 17357785 CAATGGAACTGCTCGAACC 59 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 RhoGAPp190 FBgn0026375 FBtr0074483,FBtr0074482,FBtr0074481 3 3 3 80 X 17536259 17536345 TTCGAAGAGGATACCAATACTG 57 17536200 17536218 GAAGAAGTCCTTCAGTGCC 58 NA Drosophila melanogaster 61 CG15814 FBgn0030873 FBtr0074469,FBtr0074470,FBtr0074468 3 3 4 114 X 17743837 17743952 GACTTGAACAAGTCCCTGG 58 17743676 17743694 TGATCACCATCTCGGAGTG 58 NA Drosophila melanogaster 61 Frq2 FBgn0083228 FBtr0301628,FBtr0074546,FBtr0301627 3 3 3 86 X 18095256 18095334 CAGATGGTAGGACAACAGC 57 18095383 18095402 GTTCTTGTCCATCTGATCGA 57 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574 2 3 6 162 X 18301908 18302558 CCTACCAATGCGAGATGAG 57 18286878 18286897 GTGTAGTCCATATCGAAGCC 58 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616 2 1 2 96 X 18532347 18532366 AAGGAGTTCCAGACGAATGG 59 18531811 18532291 TGTATTTATCTCGCTTGTTGCC 59 NA Drosophila melanogaster 61 CoRest FBgn0261573 FBtr0302862,FBtr0302859,FBtr0302864,FBtr0302863,FBtr0302861,FBtr0302860 2 6 6 153 X 19417822 19417840 CACAAACACGATCTGGAGC 59 19417957 19418035 ATTTGTCTGGCAGCATCTG 58 NA Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074731,FBtr0074732 1 2 2 92 X 19492088 19492106 TTTCGTCTTCACGTTTCCG 58 19492235 19492482 CCTTTGGCATAAACATTCTGG 57 NA Nonspecific, InUTR Drosophila melanogaster 61 RpS10b FBgn0031035 FBtr0074732 2 1 2 74 X 19492110 19492200 ACGGGAGTATTACGATACGT 58 19492235 19492482 CCTTTGGCATAAACATTCTGG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 sw FBgn0003654 FBtr0089403,FBtr0089404 2 2 13 95 X 20105914 20105932 AGGCTACGAACATTCCACC 59 20103227 20105857 GATTGTATTCATCATCGCCGT 59 NA Drosophila melanogaster 61 CG11227 FBgn0031139 FBtr0077274,FBtr0077275,FBtr0077273 3 3 3 84 X 20804407 20804427 CCAATTTGAGAATGGTCAGGA 58 20804253 20804272 CAAATAACCGTTGGCAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG1529 FBgn0031144 FBtr0114624,FBtr0077267 1 2 2 166 X 20902714 20902732 CTGAGATCTGCAACCTGTG 58 20902514 20902532 TTCCTTGAGTCCTTCGTCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32820 FBgn0052820 FBtr0070053,FBtr0070054 1 2 2 191 X 21484493 21484634 CATGAATCGCAACCTCTCG 59 21484320 21484338 TTGATGTCCGACATCTCGG 59 NA Nonspecific Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 1 3 5 94 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864298 21864316 TAGACCGTAGTCCTCCCTC 59 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299524,FBtr0299522,FBtr0299523 3 3 5 93 X 21900448 21904482 AGAACCGGATAGCCAAGTC 59 21904538 21904557 GGCAATACTGTGTCTTTGGC 59 NA Drosophila melanogaster 61 CG12061 FBgn0040031 FBtr0113684 1 1 3 162 XHet 23168 25000 TGGTTATGTGATGAACACGC 59 25123 25143 ATTCTGCCGGATATTTGATGG 58 NA Drosophila melanogaster 61 tRNA:CR31942 FBgn0051942 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:K5:29A FBgn0011902 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31888 FBgn0051888 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-C1237 FBgn0086038 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A2113 FBgn0086039 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-306 FBgn0067699 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30240 FBgn0050240 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:E4:56Fb FBgn0011849 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR31228 FBgn0051228 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32748 FBgn0052748 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32740 FBgn0052740 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi18S-1854a FBgn0083042 FBtr0113571 2 1 1 60 X 17040044 17040062 AAACTGCAGCGTTGATCTC 58 17040002 17040020 CATGGGATTTCCTGTGGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41106 FBgn0069938 FBtr0111194 2 1 1 196 X 22347662 22347680 TCTCATCCTACTTCCACGG 58 22347839 22347920 TAAGCGCTAATTAACTCGCG 58 NA InUTR Drosophila melanogaster 61 CG14618 FBgn0031189 FBtr0077351 2 1 1 128 X 21876263 21876281 CAATCACTTCAAGGGCCTG 58 21876372 21876482 AGCTCAAACACATGGTAGGT 59 NA Drosophila melanogaster 61 CG14614 FBgn0031186 FBtr0077368 2 1 1 80 X 21856022 21856246 GAATTTAGTGCTAAGAGCACCT 58 21855963 21855981 ATAGACACCCTTGGAGTCC 58 NA Drosophila melanogaster 61 CG14614 FBgn0031186 FBtr0077368 1 1 1 80 X 21856023 21856246 GAATTTAGTGCTAAGAGCACC 57 21855963 21855981 ATAGACACCCTTGGAGTCC 58 NA Drosophila melanogaster 61 Ir20a FBgn0031181 FBtr0077213 2 1 1 60 X 21349507 21349526 CCTGATCCTCTACTCCTTCC 58 21349466 21349486 TGAAATCCAACGCATTACCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1718 FBgn0031170 FBtr0077233 3 1 1 80 X 21164552 21164635 CAAATTCTATTCTGCAGGAGGA 58 21164493 21164511 AGATGCGAGACCATTTCAC 57 NA Drosophila melanogaster 61 Ntf-2 FBgn0031145 FBtr0113007 2 1 2 87 X 20907655 20908645 AAGACTACAGACCGACGAG 58 20908696 20908714 GTGCTGCACAAAGAAACTG 58 NA Drosophila melanogaster 61 CG1532 FBgn0031143 FBtr0077268 1 1 1 92 X 20898828 20898848 AAACAATGGTGGGTTATGGAC 58 20898040 20898776 AATCATTGCCCATTTCGTAGC 59 NA Drosophila melanogaster 61 Cyp6v1 FBgn0031126 FBtr0077276 2 1 1 94 X 20531662 20532014 GATCCTAAGTACTGGCCGG 59 20532072 20532090 AAGGGCATGTAGGACATGG 59 NA Drosophila melanogaster 61 Obp19c FBgn0031111 FBtr0077326 1 1 1 215 X 20289403 20289487 GATCAAGTTGATGGACGCC 59 20289206 20289224 ACCAGCTTTACGTTGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0113316,FBtr0074678 1 3 3 83 X 19165020 19165111 CGCTTAGCCTAAAGACCGA 59 19165158 19165176 AGCAGTACAGCATGGAGTC 59 NA Drosophila melanogaster 61 CG6873 FBgn0030951 FBtr0074607 1 1 1 60 X 18633531 18633551 CGACTATGAGTATCAGCACCA 59 18633491 18633509 TAGCTTCTCCTTCAGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp18a1 FBgn0010383 FBtr0074609,FBtr0074610 1 2 2 90 X 18585008 18585869 ACGGATATGGCATTATCAACAG 58 18584939 18584957 TAGGTCATCCCGAACTGTC 58 NA Drosophila melanogaster 61 CG6470 FBgn0030933 FBtr0074621 2 1 1 105 X 18408441 18408459 CTCCAGCTCAGGAAGAGAC 59 18407847 18408375 CGAGGAGATAGCAATAGATTGC 58 NA Drosophila melanogaster 61 Andorra FBgn0030898 FBtr0074591 3 1 1 60 X 18072905 18072923 TGCTAATCGGCTATTTCCC 57 18072863 18072885 CTATATTCCACATAGAGCGACTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32554 FBgn0052554 FBtr0074467 1 1 1 60 X 17746051 17746071 CGACAAAGTGTTCCAGTACAG 59 17746011 17746030 TTCAATGGCCACAAGTTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8211 FBgn0030858 FBtr0074480 3 1 1 102 X 17547781 17547865 GAGGTGCTAAGTTGTCCAC 58 17547697 17547715 TGAGATAGGTCTTCGAGGC 58 NA Drosophila melanogaster 61 CG5703 FBgn0030853 FBtr0074452 1 1 1 80 X 17527124 17527299 ATCAACGATGACTACTATGAGG 57 17527338 17527358 CGATATCTTATCCGCCTTCAG 58 NA Drosophila melanogaster 61 CG8675 FBgn0030834 FBtr0074446 3 1 1 91 X 17143432 17143453 CAGTCTGTGATCGAAATAGTCC 58 17143302 17143320 GTGTGCGACTTACATTGCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5162 FBgn0030828 FBtr0074393 1 1 1 81 X 17110014 17110396 GATGTCAACTTTGTGGCGG 59 17110438 17110459 CAATCTCCTCCGTATTGAAAGC 59 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 1 2 2 106 X 16741016 16741035 ACAGCTTCTTAGAAGCAACC 58 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 mRpL22 FBgn0030786 FBtr0074330 1 1 1 88 X 16678369 16678462 AGAAATGCTTATGTCTGCCAC 59 16678512 16678530 GACATTCCGCGAACAAAGG 59 NA Drosophila melanogaster 61 RpS19a FBgn0010412 FBtr0074313,FBtr0074312,FBtr0074311 3 3 3 104 X 16532323 16532445 GTCTTCTTGAAGAAGACTGGC 59 16532511 16532529 ATAGAACCAGTCGGGATCG 58 NA Drosophila melanogaster 61 CG4301 FBgn0030747 FBtr0074272 1 1 1 86 X 16307654 16307736 GTTGATGAGAACGCCACAG 59 16307785 16307804 GCAAATAGGACCCACATCAG 58 NA Drosophila melanogaster 61 CG9919 FBgn0030742 FBtr0074236 1 1 1 80 X 16223400 16223562 CAGTCGTTTGTCAAGTCCT 57 16223338 16223356 GTAGGAGTCCATCAATGGC 57 NA Drosophila melanogaster 61 CG16952 FBgn0030701 FBtr0300801,FBtr0074115,FBtr0074114,FBtr0074116 2 4 4 85 X 15769163 15769181 GCTAGATTTAGGCGATGGC 58 15769227 15769310 GCAGTTGATGCTGTATATTTCG 58 NA Drosophila melanogaster 61 Chc FBgn0000319 FBtr0112798,FBtr0074180,FBtr0112797,FBtr0074182,FBtr0074181,FBtr0074179 3 6 6 82 X 15722797 15722815 CGAAGAGTTGTTGGGTTGG 59 15722667 15722751 GCAGCAAGTCGTAACACTG 59 NA Drosophila melanogaster 61 sd FBgn0003345 FBtr0112826,FBtr0074101,FBtr0074100,FBtr0112827,FBtr0074099,FBtr0112824,FBtr0301543,FBtr0301544,FBtr0112825 3 9 9 81 X 15717652 15717671 TATCACCGGCATCTATTCGT 58 15717712 15717803 TTTGCCGTATATCAACAGTCTC 58 NA Drosophila melanogaster 61 Pis FBgn0030670 FBtr0074059,FBtr0074058 3 2 2 92 X 15597345 15597614 CAAATCTGATCGGCTACGC 59 15597271 15597290 TTACATAACACCAGCCGGAG 59 NA Drosophila melanogaster 61 CG9220 FBgn0030662 FBtr0074064 1 1 1 81 X 15481546 15483670 CACAACATATTAGGAATCAGTCCG 59 15481488 15481506 CGATGAAGGACCAGTCCAG 59 NA Drosophila melanogaster 61 CG6299 FBgn0030641 FBtr0074033,FBtr0074032 3 2 2 80 X 15360145 15360260 CGGAAACATAAACAAACTGACG 58 15360301 15360319 TTCAGCACGATCAGATCCT 58 NA Nonspecific Drosophila melanogaster 61 CG9009 FBgn0027601 FBtr0073972 3 1 1 125 X 14829456 14829478 CCCTCTTTATGATTAACCATCCC 58 14829295 14829371 TGTTCGGGAACTTGTTCAG 58 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073981 2 1 2 80 X 14771623 14771641 CGGCATGAATTTCTATCGC 57 14771332 14771580 TCATACTGACGACGTATGAC 57 NA Drosophila melanogaster 61 CG9400 FBgn0030562 FBtr0112982 1 1 2 145 X 14195299 14195896 ACCAAACAATGCAGATGCG 59 14183415 14183433 TACTGAACTGAGGTCGAGC 58 NA Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 3 1 1 224 X 13614370 13614454 CTAGGAACAGCGAACACGA 59 13614164 13614184 TTTCAATCTCCACAGAGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15760 FBgn0030508 FBtr0073810 3 1 1 96 X 13566528 13566546 CAAGCCGGATCTGTATCCA 59 13566606 13567140 ATCACTCTGGGACATCAGG 58 NA Drosophila melanogaster 61 CG34324 FBgn0085353 FBtr0112526 2 1 1 275 X 13351529 13351643 TGAGAGTTTACCACTTGCTG 57 13351273 13351291 TAGTAATGCACGGAGGTGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG15742 FBgn0030462 FBtr0290202 1 1 3 118 X 13152251 13152398 CGCTAACTTTCTTTCGATGC 58 13152152 13152170 CAGGAAGGTGCTAATCACG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Sec16 FBgn0052654 FBtr0113445,FBtr0113444 3 2 2 83 X 12498605 12498686 TTTCATTCAGCGGGTTTGC 59 12498733 12498751 GGACTCGCAAATGAGACAC 58 NA Drosophila melanogaster 61 Cpr11A FBgn0030394 FBtr0073650 2 1 1 132 X 12382067 12382360 AAGCTGGAACTGAAGACCC 59 12382456 12382474 TGTAACGGGTCTTGTACCG 59 NA Drosophila melanogaster 61 CG1950 FBgn0030370 FBtr0073638 3 1 1 60 X 11950077 11950096 CACAATTCATTTGCTCGACC 58 11950036 11950057 CTTCTATGAAATCCGTGCTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2444 FBgn0030326 FBtr0073531 1 1 1 200 X 11598767 11598863 GAACAATTCATCGCATCCC 57 11598585 11598604 AATTCGCGATTGATGTTCAC 57 NA Drosophila melanogaster 61 CG15194 FBgn0030302 FBtr0073501 2 1 1 114 X 11354102 11354120 TCAATCACATCGGACTGCT 59 11354720 11354738 TTGGGCGTCTGGATATGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11122 FBgn0030266 FBtr0073481 1 1 1 300 X 11015205 11015223 TCTCTATCGCCACATGCTG 59 11014862 11014941 AATGGATTCAGCATCGCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42249 FBgn0259101 FBtr0299513 2 1 2 80 X 10999425 10999444 AGGTTTGGACGAATGTATCC 57 10999486 11000539 CGTACGTAAGATTGCCTCTG 58 NA Drosophila melanogaster 61 CG12644 FBgn0040940 FBtr0071434 2 1 1 60 X 10052889 10052907 CCAAGACAATGTCATTGGC 57 10052931 10052949 AGGGTTACCAACGCTAGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1468 FBgn0030157 FBtr0071388 3 1 1 115 X 9772627 9772645 GACGTCTACTACCGAAAGC 57 9772724 9772865 ACTACATCTCCACACTCCG 58 NA Drosophila melanogaster 61 mxc FBgn0260789 FBtr0071332 3 1 1 111 X 9136247 9136369 CAAAGCATGCCTGAACTGG 59 9136154 9136173 CCGACGGATTGTTAACAGTC 59 NA Drosophila melanogaster 61 Zpr1 FBgn0030096 FBtr0071342 1 1 1 114 X 9055408 9055429 CAATAGTTTCATCGAGAATCCC 57 9055201 9055219 GTGATTCTGCTCGTACAGG 58 NA DesignNoJunction Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302661,FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662,FBtr0302663 1 6 6 90 X 8915676 8915768 GCGATGTTCAAGTGAATCCC 59 8915819 8915839 TCCTTGTCATAGTGGTACTGC 59 NA Drosophila melanogaster 61 l(1)G0095 FBgn0026679 FBtr0071234 1 1 1 149 X 8450547 8450642 AATCTAATCTGCAGCGCCT 59 8450416 8450434 GTGATTCCTTCAAGGGCAC 58 NA Drosophila melanogaster 61 CG33223 FBgn0053223 FBtr0071239 3 1 1 267 X 8377621 8377639 TTGCTGCGAATAAAGTTGC 57 8360290 8360308 TCGTAGACGGTCTTCTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 slpr FBgn0030018 FBtr0071184 2 1 1 86 X 8070106 8070125 GAAATCGTTGTGGTCCTGTC 59 8069979 8070057 GACACCGACCTTATCTCCA 58 NA Drosophila melanogaster 61 CG2278 FBgn0030017 FBtr0071185 1 1 1 80 X 8062922 8063013 GAAATGGTTACTTCGGTTCCA 58 8062862 8062882 GATACGATTTACAGTCACGCT 58 NA Drosophila melanogaster 61 CG15330 FBgn0029987 FBtr0071099 3 1 1 60 X 7850389 7850407 ATCAGACGCAATCATCCGA 59 7850428 7850449 CCAAGGTGTTATTATTGGATGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18624 FBgn0029971 FBtr0071140 1 1 4 80 X 7787515 7787797 CTATCGATGCTATAAACCTATGGG 58 7787458 7787478 GTGGGAAAGAATATCACTGCG 59 NA InUTR Drosophila melanogaster 61 CG4593 FBgn0029929 FBtr0071009 1 1 1 60 X 6908243 6908261 CATTCAGGGCAACAAGGTG 59 6908283 6908303 CTTCAGATTCTCCCACATGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32732 FBgn0052732 FBtr0071039 3 1 1 84 X 6853075 6853095 GCTGTTAACACTGGAGAACAG 59 6852958 6853030 GGTCTACGAAACCATTGTGC 59 NA Drosophila melanogaster 61 Smg1 FBgn0052743 FBtr0070972 2 1 1 81 X 6718951 6718969 ACATGAACCATGTTGTGGG 58 6719014 6719101 TTGATCGTATCGCCTTTGC 58 NA Drosophila melanogaster 61 CG33666 FBgn0053666 FBtr0302415 2 1 1 73 X 6370846 6370925 GATTCTTGACTACTCCGAAGC 58 6370793 6370811 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG3847 FBgn0029867 FBtr0070905 3 1 1 60 X 6242038 6242056 GTTCGAGAGTACCATCGAC 57 6242080 6242098 GTAGAAGGTCTTGTTGCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nep1 FBgn0029843 FBtr0070872,FBtr0070873 3 2 2 81 X 5996913 5997002 CGATATAGTATTTCCTGCTGGC 58 5997043 5997062 GATTCCGCCGTAATTCAAGG 59 NA Drosophila melanogaster 61 raptor FBgn0029840 FBtr0070885 3 1 1 84 X 5982241 5982317 GACAAGATTCCAGGCAAGG 58 5982175 5982193 CTATCGTGTCCGTAATGGC 58 NA Drosophila melanogaster 61 raptor FBgn0029840 FBtr0070885 1 1 1 82 X 5982239 5982315 CAAGATTCCAGGCAAGGTC 58 5982175 5982193 CTATCGTGTCCGTAATGGC 58 NA Drosophila melanogaster 61 CG5941 FBgn0029833 FBtr0070867 3 1 1 147 X 5932588 5932916 ACACAGGAAATTCTGGCGA 59 5933022 5933045 CTTTGCTCTCATGACATAGAAGAC 59 NA InUTR Drosophila melanogaster 61 CG42492 FBgn0259994 FBtr0300465,FBtr0300466 1 2 3 80 X 5523481 5523499 CCTTCTCATCTGCAACGTG 58 5523047 5523437 TCCAGCTGAACAGGATTGG 59 NA Drosophila melanogaster 61 TrxT FBgn0029752 FBtr0070755 3 1 1 122 X 5205732 5205886 ATTAAAGTCATGGTGTACCCAG 58 5205631 5205650 TATTATCTTGCAAGGTCCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32773 FBgn0052773 FBtr0070703 3 1 1 60 X 4282027 4282047 ATCGAGATGTCTCGATGTCAG 59 4281987 4282005 GACATGCAGGAAGAAGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12691 FBgn0029701 FBtr0070646 2 1 1 60 X 4160359 4160377 AGATCACAGTAAGCCTCCA 57 4160400 4160419 CGATAGTTCTTCACTCGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15571 FBgn0029696 FBtr0070664 2 1 1 60 X 4110989 4111008 AATCCCACTACTATGAGGCG 59 4110948 4110967 CGTTGCTAAACTTGTAGCAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13021 FBgn0029669 FBtr0070570,FBtr0070571,FBtr0070572 1 3 3 60 X 3409298 3409319 GGACTACTCAAAGTTTCTGTCC 58 3409339 3409358 CGCAACTTTAGGCAGAAGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3939 FBgn0040396 FBtr0070508 2 1 1 72 X 3069635 3069654 ACTTCTACGGCGAGAAAGAC 59 3069689 3069982 ATGATAGTTTCCTCGGCCG 59 NA DesignRelaxed Drosophila melanogaster 61 CG32795 FBgn0040384 FBtr0070492,FBtr0070491,FBtr0070493 3 3 3 88 X 2679093 2679111 CAAGATGACCTTGAAGCGC 59 2678711 2679044 CCAGGATTATCTGCAAATAGCG 59 NA Drosophila melanogaster 61 CG9904 FBgn0040336 FBtr0070442 3 1 1 101 X 2515338 2515422 CATAGTGGCCATTAGCACC 58 2515487 2515505 TTGATTTGCACGCTATGCA 58 NA Drosophila melanogaster 61 CG13759 FBgn0040376 FBtr0070437 3 1 4 86 X 2476847 2477033 AGAGTACCCACATATCTTCTTTACC 59 2477075 2477095 GGTGCAATCATCTTGTACTCC 59 NA InUTR Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 1 1 1 176 X 2221624 2221813 CAGGAACAAATGAAGCGGG 59 2221950 2221971 ACGCATCCATATTTCCAAAGAG 59 NA DesignNoJunction Drosophila melanogaster 61 msta FBgn0053548 FBtr0070421 3 1 2 163 X 2106969 2106987 GTTACTATGGTCCACGCTG 58 2100421 2100439 GAGTCTGGACGGGAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17776 FBgn0040899 FBtr0070390 1 1 1 70 X 2079013 2079031 ATTAACACCAACACGCTGC 59 2079065 2079083 TACAGGGTGACTCCAATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bcn92 FBgn0013432 FBtr0070431 1 1 1 159 X 2043363 2043442 AACTTCAGAATGTACGCTGC 59 2042846 2042864 TGTCAGCGGAATACAGGTG 59 NA Drosophila melanogaster 61 mRpL16 FBgn0023519 FBtr0070314 3 1 1 107 X 1784396 1784416 TAGTCTCCCAGCTCTTTAAGC 59 1784561 1784654 GCTCCACATTCTGGTATTTAATAGG 59 NA Drosophila melanogaster 61 CG14770 FBgn0029573 FBtr0070213 2 1 1 220 X 1263400 1263657 AGTTGGCTATTACCTGCCTG 59 1263840 1263858 GTAGTGGTGGAACTTGACG 58 NA DesignRelaxed Drosophila melanogaster 61 CG11379 FBgn0040362 FBtr0070198 2 1 1 60 X 1074538 1074556 CGCTCTTACTGGAGACAGG 59 1074579 1074598 CACAGTTTGCTAAGGGTCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13358 FBgn0026874 FBtr0290198 2 1 1 75 X 698029 698118 CTTCCGTCCCAGATTTGGT 59 697972 697990 GATGATTTGGGAAGAGGGC 58 NA DesignRelaxed Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070123,FBtr0100530,FBtr0070124,FBtr0070126,FBtr0070127,FBtr0070125,FBtr0070129 1 8 8 60 X 551449 551469 ATATTGGCAGCGAACTATCTG 58 551491 551509 CAACAGTCTTGCAGGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4293 FBgn0024983 FBtr0100475,FBtr0070090,FBtr0070089,FBtr0100476 1 4 4 86 X 423498 423516 GTTCGCCAAGAACTTGGAC 59 423372 423448 CTCAACAGGGATAGGGTGC 59 NA Drosophila melanogaster 61 CG32816 FBgn0052816 FBtr0273442,FBtr0273443 1 2 4 80 X 211951 312519 GGTTTATTCGACGAATTTCCG 58 211891 211911 CTTTAGTACAGTGATTGGCGA 58 NA InUTR Drosophila melanogaster 61 CR41591 FBgn0085808 FBtr0114262 3 1 1 110 U 7776176 7776196 TACAGTAGCGTAAACTAGCTG 57 7776086 7776104 CTCTGTCAAAGTACAGCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42424 FBgn0259855 FBtr0300152 3 1 1 61 U 7779244 7779262 TGGGCCTGGATTACTTCAG 59 7779201 7779219 AGGAACTGTCGAACATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42620 FBgn0261335 FBtr0302239 3 1 1 60 U 8502230 8502250 TTATGCAGGAGTTATTGTCCG 58 8502272 8502290 TCTATTTGCTGGCACTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 NfI FBgn0042696 FBtr0089141 1 1 1 80 4 296248 296270 CTTTAAGAGGCTGTATGATCGAG 58 294527 296210 AAGGGTGAAATTCATCCTGTC 58 NA Drosophila melanogaster 61 dpr7 FBgn0053481 FBtr0089142 1 1 3 94 4 270759 270830 TTTACGACACAAAGTCGGC 58 270683 270701 ATTAACAGAGCAAGCCAGG 57 NA Drosophila melanogaster 61 snoRNA:Psi28S-2442b FBgn0082988 FBtr0113581 1 1 1 93 3R 1424239 1424257 CAACAACTCAATCGGTGTC 57 1424164 1424182 ATCTTTAGATTGCTGGCGG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 TwdlU FBgn0037223 FBtr0113190 2 1 1 120 3R 70197 70216 CGACCAAATGTAATCTTCGG 57 70296 70371 GGCTTAGAATTAGAAAGATGCG 57 NA Drosophila melanogaster 61 CG1544 FBgn0039827 FBtr0085755,FBtr0113311,FBtr0085756 3 3 3 81 3R 27028389 27028776 ACAATGTCCTGGGAGACAC 59 27028818 27028839 AGAGTGTAGTAGTGCTTTCCAC 59 NA Drosophila melanogaster 61 CG15545 FBgn0039806 FBtr0085719 3 1 1 80 3R 26697914 26697996 GTGTGCTGGAATTTCTTTGC 58 26697853 26697871 CCGATAGTAGGATCGTGGG 58 NA Drosophila melanogaster 61 CG11313 FBgn0039798 FBtr0300700 2 1 1 80 3R 26556223 26556304 CGCAAAGGAGATGTAGTCTC 58 26556162 26556180 TAGGCACCTTCCATTGAGG 59 NA Drosophila melanogaster 61 CG15533 FBgn0039768 FBtr0085626 3 1 1 87 3R 26256517 26256610 ATGAGAAAGTACTGGCGCT 59 26256661 26256679 AAAGAGATCCTGCCAAGCA 59 NA Drosophila melanogaster 61 CecB FBgn0000278 FBtr0085640 1 1 1 76 3R 26039384 26039402 ATCAGCCTGGGAAACTCAG 59 26039268 26039286 CTGGTATGCTGACCAATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG31031 FBgn0051031 FBtr0085566 3 1 1 95 3R 25888994 25889012 ATTCTACAATGGCCCTGCT 59 25889071 25889089 TACGGATGGTACCTTTGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Acph-1 FBgn0000032 FBtr0085610,FBtr0085609 3 2 2 132 3R 25817724 25817813 TTATTTGAGCTGCACAGTCC 58 25817611 25817629 CAGGTATGTCCAGAGGCAG 59 NA Drosophila melanogaster 61 CG11900 FBgn0039650 FBtr0085407 2 1 1 80 3R 25028151 25028171 ATCCATCTGCCAAATTCATGG 59 25028024 25028109 TTTCCTGAGGATCCTTGCG 59 NA Drosophila melanogaster 61 CG14527 FBgn0039613 FBtr0085330 3 1 1 60 3R 24707401 24707422 CAATTGATATTCGTGAGCATGG 58 24707441 24707461 GTCTGTTGTATTCGTAGACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14528 FBgn0039611 FBtr0085329 3 1 1 60 3R 24703034 24703055 AGTATCACGAGTACCAATACGG 59 24703075 24703094 TTCTCTGACTGATCCTTGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322,FBtr0113301 2 6 6 80 3R 24639523 24639610 ATGTTGACAATGAGTCTGATGC 59 24639648 24639669 ATCCGTAGCAGTAAGGATAGTG 59 NA Drosophila melanogaster 61 CG9997 FBgn0039597 FBtr0085314 3 1 1 60 3R 24582409 24582433 CGAATAATGACACAGTACAGTATGG 59 24582373 24582395 GAATTGGTCAAGGTAACTACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5514 FBgn0039560 FBtr0085252,FBtr0301143,FBtr0085253 1 3 3 80 3R 23765356 23765436 CATTACCTTCGAAGGTACTGAG 58 23765475 23765495 TCCTCGATGGAAAGAATTTGG 58 NA Drosophila melanogaster 61 Klp98A FBgn0004387 FBtr0085211 3 1 1 80 3R 23376418 23376603 AAGGTTCAGATCGACATTGTG 58 23376358 23376382 CTCAGAGAAATCTCGTTTCTTAGAG 59 NA Drosophila melanogaster 61 l(3)mbt FBgn0002441 FBtr0085175,FBtr0085176 3 2 2 111 3R 23094416 23094503 TTTCTGGCACCACATTTCTG 59 23094324 23094343 TTTGCTCTAGTTGGGTACGG 59 NA Drosophila melanogaster 61 CG5815 FBgn0027574 FBtr0085106 1 1 2 111 3R 22940112 22940132 GATAAGCGTCGTTATCAAGGA 58 22940205 22940280 GATCCTCTTGCATTCCCAG 58 NA Drosophila melanogaster 61 CG6074 FBgn0039486 FBtr0085133 1 1 1 80 3R 22929440 22929525 TCTTCTTCAATCTCGACGAGG 59 22929380 22929398 GATTGGCATCGGCAATCAG 59 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0085082 2 1 3 102 3R 22788170 22788894 TTCAGCTTCACTGAGGTCC 59 22788086 22788105 AATAATCGTGCGGAAAGACG 59 NA Drosophila melanogaster 61 Hex-t1 FBgn0042711 FBtr0085010 1 1 1 60 3R 22275552 22275571 GCTGTTATGTGGAAAGGGTC 59 22275593 22275612 AGCTTTCTGTACTCATCACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CcapR FBgn0039396 FBtr0084983,FBtr0302197 2 2 2 245 3R 21750624 21750642 ATTATTCCACGGGCAAAGG 58 21750306 21750415 CGGAAAGCGACTTAATGTG 57 NA DesignRelaxed Drosophila melanogaster 61 CG5913 FBgn0039385 FBtr0084938 3 1 1 60 3R 21720017 21720037 CTCCAATGAGATCATGGATCG 58 21720056 21720077 CACTTTAAACTGATCCAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHKov1 FBgn0045761 FBtr0113352 1 1 5 83 3R 21149767 21149785 CATGGGACAGGTGTTTGTC 58 21149634 21149721 ACGTCCTTAAGAGCTTTGAC 58 NA Drosophila melanogaster 61 CG10559 FBgn0039323 FBtr0289942 1 1 1 80 3R 21140577 21140662 TATGGACGAGTTGGGTATCAC 59 21140517 21140538 GGTCAGATTTGCATCTTCAGTC 59 NA Drosophila melanogaster 61 CG31436 FBgn0051436 FBtr0084830 1 1 1 82 3R 21130997 21131015 AGATCGGCTATAAAGGCGT 58 21131056 21131140 GAGAAAGAACTCGTAGTACTTGTG 59 NA Drosophila melanogaster 61 CG33095 FBgn0053095 FBtr0100204 2 1 2 102 3R 20925094 20925112 TTCAAAGCACCCGAATCCT 59 20925178 20925677 GGAATTTGAGGCACCATCG 59 NA InUTR Drosophila melanogaster 61 CG6980 FBgn0039228 FBtr0084698 2 1 1 84 3R 20633791 20633869 AGAACTACAGAGAAGTCAGGG 58 20633909 20633933 GATGATAGCCTTGTCATAATGTAGG 59 NA Drosophila melanogaster 61 CG13611 FBgn0039177 FBtr0084600 2 1 1 83 3R 20105725 20105803 CGATTCAATCTTCGTGAGCG 59 20105847 20105867 CATGAAGTTCCTTGACTTGCT 58 NA Drosophila melanogaster 61 Gdh FBgn0001098 FBtr0089496,FBtr0089497,FBtr0089498 3 3 3 81 3R 19763341 19763466 CATTCAAGCTAAGATCATTGCC 58 19763281 19763299 GATGTTGCGATCGATGAGG 58 NA Drosophila melanogaster 61 Pli FBgn0025574 FBtr0112908,FBtr0084527,FBtr0112907 1 3 3 83 3R 19691341 19691359 TCCCATACTGGCTGAAGAC 58 19688928 19691295 CCATTGTAGCCGAGTATCAC 58 NA Drosophila melanogaster 61 CG10221 FBgn0028475 FBtr0084467 2 1 1 80 3R 19582856 19582929 CCAAATAGAAGCTCAAACCGT 59 19582796 19582816 ATCATGGCTACTCGCTTATCC 59 NA Drosophila melanogaster 61 CG10184 FBgn0039094 FBtr0084481 1 1 1 82 3R 19429481 19429566 CTTTCTGTACGAACAAGGTGG 59 19429419 19429437 TAAAGGTGCCATCCTGCTC 59 NA Drosophila melanogaster 61 Rassf FBgn0039055 FBtr0084407 2 1 1 81 3R 18941121 18941140 GAGTTGTGCTGAGAAGACCT 59 18940998 18941077 AGCTTGGTACGAGAACGAC 59 NA Drosophila melanogaster 61 CG6697 FBgn0027526 FBtr0084347 1 1 1 81 3R 18887529 18887607 CTGAAGTACAAAGGAAAGACAG 57 18887646 18887667 CCATCATAAGCTTAAAGTTGGG 57 NA Drosophila melanogaster 61 CG34131 FBgn0083967 FBtr0110878 2 1 1 60 3R 18189837 18189927 ATCAGCTATCAGATTAAGAGCC 57 18189948 18189966 AGAAGATGAACTGCACCAC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG17298 FBgn0038879 FBtr0084056 1 1 1 125 3R 17109000 17109317 TTCAAAGTACTGTTCGTGCTC 59 17109404 17109422 TCCATGATGGATGATGGGC 59 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 3 2 2 93 3R 17096168 17096186 TGATGTTAAGCTCCATCGC 58 17096241 17096317 GAAGGTTATCTTGTGAGACGA 57 NA Drosophila melanogaster 61 CG17282 FBgn0038857 FBtr0084033 3 1 1 60 3R 16944030 16944049 CCTTTGATTACTTTGTGCGT 57 16943989 16944010 AGTTTATCGAAGGGTTTGTAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 rtet FBgn0028468 FBtr0084009 2 1 1 81 3R 16935847 16935867 GTCACATTTCTGATGTACCAC 57 16935909 16935985 TCATGATTACACCCGTTGTC 58 NA Drosophila melanogaster 61 CG17273 FBgn0027493 FBtr0083991 1 1 1 115 3R 16652059 16653713 TTTCCGTCATTGGCAATGG 59 16651962 16651980 ACGATCCGAGATGATCAGC 59 NA Drosophila melanogaster 61 CG17208 FBgn0040573 FBtr0083893 1 1 1 78 3R 16263445 16263463 GACAAGTCACTCTCCTCGG 59 16263385 16263403 CAAACTGCCACCACTTACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17199 FBgn0038775 FBtr0083874 2 1 1 60 3R 16034565 16034585 AAGGAAGTGCCCAAATTAGTG 58 16034525 16034543 CCTCCGTTGATGTTGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mira FBgn0021776 FBtr0083848 3 1 2 246 3R 15758633 15758651 TCAACGCACTGAGATCCTC 59 15758315 15758333 ATGTTCTCCAGCTTGAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6255 FBgn0038708 FBtr0083769 3 1 1 60 3R 15288365 15288385 TCTTTATACCACCTCCATCCG 59 15288325 15288345 CCAATTTCACTCTCGATAGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11626 FBgn0038705 FBtr0113247 2 1 1 101 3R 15235925 15235996 AGTTCAGAAACTCGTGCCT 59 15236061 15236079 CTGATTGGCAAAGGCTTGG 59 NA Drosophila melanogaster 61 CG14299 FBgn0038651 FBtr0273382 1 1 1 80 3R 14577343 14577361 GCACTCAATCTGATGCTGG 59 14577223 14577303 CAGAGCCTTAATGTGTATGTTGG 59 NA Drosophila melanogaster 61 CG7702 FBgn0038638 FBtr0083664 3 1 2 157 3R 14495274 14495292 CAAGATCAGCAGTAACCGC 59 14495407 14496870 GCAGTATAGAATAGTCGTTAGTCTG 58 NA InUTR Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582,FBtr0083583,FBtr0083581 1 3 3 114 3R 14204679 14204956 CAGTGAAGGATGAGATCGTC 57 14204584 14204602 TCGGTCTTCACAATGTCAG 57 NA Drosophila melanogaster 61 CG18600 FBgn0038601 FBtr0083594 3 1 1 89 3R 14126691 14126709 AGTTTGATCCCGAGCTCTC 59 14126563 14126641 CGATTTAATGGGTAGAGTCTGC 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083567,FBtr0083565,FBtr0083566,FBtr0083568 1 4 4 81 3R 14073562 14073580 ATTGCCATGAACGATCTGC 59 14073621 14073711 GAATCTCATAGTAGAACACCGAG 58 NA Drosophila melanogaster 61 cdm FBgn0261532 FBtr0083619 2 1 1 174 3R 14006605 14006624 AGGAGATCGATGTCCTAGAG 57 14006331 14006409 AAGAACATAACAATGGCCGT 58 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083556,FBtr0083555,FBtr0290321,FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 3 7 7 130 3R 14001240 14001333 GCGATCAATATGTTTGCTGTC 58 14001425 14001443 TAAACGAGTTGCAGATGCG 59 NA Nonspecific Drosophila melanogaster 61 htl FBgn0010389 FBtr0083550 3 1 3 279 3R 13875053 13875071 GCGGACCAATTTGGAACAG 59 13874133 13874154 CTCGTGTGATATACTCAGTGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7397 FBgn0038543 FBtr0083531 2 1 1 80 3R 13599076 13599212 CTTCATGGACACGTTCTCG 58 13599014 13599032 GCATTCTTTGCCCTATTGC 57 NA Drosophila melanogaster 61 CREG FBgn0025456 FBtr0089895 1 1 3 88 3R 13219599 13219617 CCCTAAGATGCAAGGAGGG 59 13219314 13219549 AATTGTGAGCTTCTTCACCTG 58 NA Drosophila melanogaster 61 CG31262 FBgn0051262 FBtr0302853,FBtr0302852,FBtr0300053,FBtr0300361 2 4 4 80 3R 13043130 13043151 ATCCTTGATAACTAAGCCTGCA 59 13043018 13043095 CTTGGAAGAAATCTATGGATCACTG 59 NA Drosophila melanogaster 61 CG5225 FBgn0038468 FBtr0083389 1 1 1 84 3R 12855114 12855132 AAGGGATCCAAAGGTCCAC 59 12855292 12855310 GATACGTAGTGCCTGGAGG 59 NA DesignNoJunction Drosophila melanogaster 61 Ahcy89E FBgn0015011 FBtr0083378,FBtr0083379 2 2 2 81 3R 12805119 12805208 TCCTGGACAGTCTGAAACG 59 12805056 12805074 TTTCCCACATCACCGTACC 59 NA Drosophila melanogaster 61 modSP FBgn0051217 FBtr0083353 3 1 1 88 3R 12479031 12479052 AAGTTCTATCGCAATTACGGAG 58 12478907 12478982 CTTCCTTTGTAGCCAGGTG 58 NA Drosophila melanogaster 61 CG10340 FBgn0022344 FBtr0083358 2 1 1 108 3R 12439835 12439853 CCATCAAAGATGGGCAGAG 58 12439689 12439707 TCAGTGAGCTTCTTGTGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Pak3 FBgn0044826 FBtr0083312,FBtr0083313 2 2 2 163 3R 12276741 12276765 CGTAGTCTTTGTAGTATGTACAACC 59 12272770 12272788 AGCGATGCGATATGGATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17931 FBgn0038421 FBtr0083323 1 1 1 92 3R 12184463 12184482 GAAGAACCAGAAGAAGCAGG 58 12184319 12184408 ATTAACTCAGCGTCCCTGG 59 NA Nonspecific Drosophila melanogaster 61 Bin1 FBgn0024491 FBtr0083279 1 1 1 65 3R 12012468 12012488 GGAATCTATGATTGTGGAGGA 57 12012350 12012441 ATAGGACAGGTCTTCTCGC 58 NA DesignRelaxed Drosophila melanogaster 61 CG5205 FBgn0038344 FBtr0083147 1 1 1 88 3R 11315159 11315177 GGAGGAATTGGACGAACTG 58 11315229 11315305 TCAGAATGTTCACCTTGCC 58 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083105,FBtr0083106 2 2 2 80 3R 11229213 11229231 GCATTGTTCTCAGCATGGT 58 11229095 11229171 TGGATTCATGCTGTTTAAGGG 58 NA Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 2 2 2 80 3R 11029204 11029285 TGGAACTTAATCCTATCCTTGC 58 11029145 11029163 AGGTCAGATCATCGAAGGT 57 NA Drosophila melanogaster 61 Cys FBgn0004629 FBtr0082980 3 1 1 124 3R 10395075 10395153 AGCTACAAGGCAATCAATGTG 59 10394971 10394989 TGAGTCCAGATCTTCACGG 58 NA Drosophila melanogaster 61 CG14854 FBgn0038238 FBtr0113233 3 1 1 80 3R 10385349 10385434 AAACCAGTTGGTTTGTATGGG 59 10385289 10385309 ATTGTCCATGTACTGGAACAC 58 NA Drosophila melanogaster 61 primo-1 FBgn0040077 FBtr0091749,FBtr0091747,FBtr0091748 2 3 3 73 3R 9536370 9536452 TTGTTTGGGCAACATCTGC 59 9536315 9536333 TGACATTCGCCTTCTCCAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 flfl FBgn0024555 FBtr0114604,FBtr0082817 2 2 2 82 3R 9514941 9514959 CATCGTAGAGTTCTCGCCT 59 9515005 9515098 TCAGTAGCATACGCTCCAC 59 NA Drosophila melanogaster 61 CG14375 FBgn0038147 FBtr0082762 1 1 1 81 3R 9215469 9215777 AATCATGGTTTAACCGACCTC 58 9215408 9215426 TTCAATTCGGCGGAATTGG 59 NA Drosophila melanogaster 61 Osi22 FBgn0038133 FBtr0082738 3 1 1 119 3R 9117099 9117178 ATAGTGAAGAAGGTCGCGG 59 9117261 9117279 GCAGTTTCAGCTTGGTGAC 59 NA Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 2 1 1 106 3R 8822345 8822423 AAATGTTGTCTACACATCCGTG 59 8822490 8822508 TAACTCGCTCCGTGATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 beat-Vc FBgn0038084 FBtr0082658 2 1 1 60 3R 8578167 8578185 CCAGAGTTCAAGCTGATCG 58 8573271 8578143 CGAATTTGGGCAACACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11608 FBgn0038069 FBtr0082647 3 1 1 83 3R 8465146 8465227 TGAACAGGACCCTCATTCC 59 8465273 8465292 TGAGCTGGAAGAAGTGTCTC 59 NA Drosophila melanogaster 61 dpr17 FBgn0051361 FBtr0082543,FBtr0300126,FBtr0082542 2 3 3 96 3R 7936151 7936169 ATAGTGACGAGCGAACTGG 59 7936224 7936323 GGTATAATTAATGAGCCGATCGTG 59 NA Drosophila melanogaster 61 Sbf FBgn0025802 FBtr0082530,FBtr0082529 2 2 2 81 3R 7617739 7617820 GGCTTTATGCATTGGGAGAG 59 7617677 7617697 TAGTCTACGGGAATGAAGTCC 58 NA Drosophila melanogaster 61 CG6719 FBgn0037893 FBtr0082406 1 1 1 113 3R 7235011 7235029 GAGTATCCGCTAGACGAGG 58 7234855 7234936 AGTTGTGATTTGATCCCTCAG 58 NA Drosophila melanogaster 61 Ugt86Dj FBgn0040250 FBtr0082373 2 1 1 65 3R 7000884 7000908 GGATGTCACCTTTATACGAATATGG 59 7000612 7000862 CCAACGGATTCCTCAAACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42633 FBgn0261356 FBtr0302274 3 1 1 80 3R 6607566 6607639 ATGCCTCAAGACGACTAAGAG 59 6607506 6607525 CTTCCTTCATGAGCTTCGTC 58 NA Drosophila melanogaster 61 mthl11 FBgn0045443 FBtr0082247 3 1 1 119 3R 6227711 6227796 ATCTCACCGGATATGCTGG 59 6227877 6227897 TGTTCTTGTAGAAGACCTGGA 58 NA Drosophila melanogaster 61 pont FBgn0040078 FBtr0082226 3 1 1 84 3R 6089062 6089080 ACCTACACAAGTCCCTGGA 59 6089128 6089207 GTGGTGCCACGAATAACAC 59 NA Drosophila melanogaster 61 CG16904 FBgn0037763 FBtr0082154 2 1 1 62 3R 5642489 5642507 ACAACATCGGACAAGTCCT 59 5642373 5642464 CGAATAACAGATGGATGCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9467 FBgn0037758 FBtr0082156 1 1 1 84 3R 5626398 5626416 GTCAACCTCAATGTGGGTG 58 5626254 5626272 GAAGAGCCGTGAAGAAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG8500 FBgn0037754 FBtr0082139 1 1 1 84 3R 5611790 5611867 GTACAGACAGGTCATAAGCTG 58 5611913 5611931 CATAGCCGGGAATTGATGC 59 NA Drosophila melanogaster 61 CG9492 FBgn0037726 FBtr0082100 2 1 1 80 3R 5493923 5494763 AGATCAAGTCCTGCAACCA 59 5493861 5493880 TTACCGCATAGACGTAGTCC 59 NA Drosophila melanogaster 61 Fst FBgn0037724 FBtr0082101 2 1 1 60 3R 5471121 5471139 AGAATCCACCACAGAGGAG 58 5471079 5471097 ACTTGTGGATTCTACAGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9362 FBgn0037696 FBtr0082044 1 1 1 80 3R 5281548 5281566 GTGTGGGAGATGAGCTCAG 59 5281423 5281506 TCAGGTCAGCTTTGTATCTCC 59 NA Drosophila melanogaster 61 CG9356 FBgn0037688 FBtr0082048,FBtr0082047 1 2 2 125 3R 5228660 5228678 AACATTCTCCAACGCATGG 58 5228484 5228571 GAATTCCAAGGCCCTAACC 58 NA Drosophila melanogaster 61 CG8132 FBgn0037687 FBtr0082029 2 1 1 110 3R 5227300 5227374 TAGCAACATCATGCGTTTGG 59 5227447 5227465 GGTTTATGCTCCTTGACCG 58 NA Drosophila melanogaster 61 CG18473 FBgn0037683 FBtr0082025 1 1 1 84 3R 5190249 5190325 ATCGATTGACCTCCTATGGC 59 5190372 5190390 AAAGTTACTCCGCGATCGA 59 NA Drosophila melanogaster 61 CG16733 FBgn0037665 FBtr0081974 1 1 1 60 3R 5077905 5077923 ATCGATCATCACGAGACGG 59 5078091 5078109 GATTGCGAACCAGATCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG9684 FBgn0037583 FBtr0081853 1 1 1 81 3R 4187677 4187697 GTAATCGTTGCTATATTCGCG 57 4187390 4187637 GCTATGGTATTAACCTTCTTGC 57 NA Drosophila melanogaster 61 CG31463 FBgn0051463 FBtr0081831 2 1 1 60 3R 4118590 4118609 TGAACAAACCAAAGATCGTG 57 4118630 4118650 CAGTAGTTCCACATGTATCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31544 FBgn0051544 FBtr0081532 2 1 1 60 3R 3244798 3245111 AAATCCAGGGTTGTGATGGA 59 3245133 3245152 GGGAAATTGGACAATTGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG42650 FBgn0261502 FBtr0302394 3 1 1 106 3R 3217599 3217619 TGTCAGGTATAACAACCAGCT 59 3217681 3217757 GAGTAGTGTAAGACATCACTTTCAC 59 NA Drosophila melanogaster 61 CG10032 FBgn0037493 FBtr0081579 2 1 1 78 3R 3097870 3097889 AAACAGGAGGTGATGGTCTG 59 3098035 3098053 CAGACAACCGTAAACTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14610 FBgn0037477 FBtr0081609 3 1 1 60 3R 2969816 2969834 AGTGTCGGAAGAATCCTGG 59 2969774 2969794 TCTTCATGAAGTGCCTTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2336 FBgn0037455 FBtr0089748 2 1 1 164 3R 2406641 2406727 GATGTACAACAACCGACCC 58 2406913 2406935 GTCTCAATTTCTAGGATCAACGG 59 NA Drosophila melanogaster 61 CG33324 FBgn0053324 FBtr0081727 1 1 1 116 3R 2272033 2272195 AGTGTATCACGATGTTATTGCC 59 2272272 2272290 CTTCGCCTGGTCTTATCCA 59 NA Drosophila melanogaster 61 Osi11 FBgn0037418 FBtr0078614 2 1 1 60 3R 2094319 2094341 CCGTCGAACTATAATCAGAACTC 58 2094281 2094299 AGATATGACGCACTGTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31562 FBgn0051562 FBtr0078589 1 1 1 82 3R 2010550 2010568 ATGATCCTCGAGGATCTGG 58 2010748 2010766 GGCTTGGTCTTAACAACCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG12590 FBgn0037294 FBtr0078773 1 1 1 60 3R 985843 985863 ACAAACTCAGTCAAGGAATGG 58 985885 985903 CGCTTGGTATGGATGATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1124 FBgn0037290 FBtr0078841 2 1 1 102 3R 792867 792885 ATGTCATAGGAACGACCCG 59 792950 793351 AGAGGGCAGCTGAATATCAG 59 NA Drosophila melanogaster 61 TwdlV FBgn0037227 FBtr0078976 2 1 1 125 3R 80507 80586 TGGATTCATTGTCCTATGCCT 59 80673 80691 CCTTGGAAGAAGGAGCCTC 59 NA Drosophila melanogaster 61 CG12582 FBgn0037215 FBtr0111225,FBtr0078964 2 2 2 80 3R 28037 28110 TGGCGATGTACATTTCTACGA 59 28151 28170 AACTCACTGACGAATCGAGG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 2 7 7 83 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862559 22862776 CGAAGATAAGACCTTGTGTATTCTG 59 NA Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 2 2 2 60 3L 22857206 22857224 GTCTTTCTGGTGCTGTTCG 59 22857247 22857266 GACTACATTAGGCCAAGACC 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33169 FBgn0053169 FBtr0299876,FBtr0078549 1 2 2 60 3L 22857207 22857225 TCTTTCTGGTGCTGTTCGT 59 22857247 22857267 TGACTACATTAGGCCAAGACC 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG33770 FBgn0053770 FBtr0290125 1 1 1 83 3L 22641789 22641807 GATCTCGCAATTAGCCAGG 58 22641854 22641930 AATTTGACGCTACCTTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 Ten-m FBgn0004449 FBtr0078509,FBtr0112842 1 2 2 109 3L 22333731 22399999 AAGACAAGGCTTCCTCCTG 59 22333640 22333661 GATTGTTAACGGTTAAACGACC 58 NA Drosophila melanogaster 61 CG42552 FBgn0260754 FBtr0301251 2 1 1 154 3L 21770882 21770963 ATATCTCCGAACACGCAGG 59 21771078 21771099 GATATTGAGATGCCACAAGGTG 59 NA Drosophila melanogaster 61 CG42552 FBgn0260754 FBtr0301251 3 1 1 155 3L 21770881 21770963 TATATCTCCGAACACGCAGG 59 21771078 21771099 GATATTGAGATGCCACAAGGTG 59 NA Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058,FBtr0300057 2 2 2 81 3L 21567943 21567961 AGTCTCAACTCTGGTCTGG 58 21568006 21568339 CAAGGGCCAGTTTCTTCAG 58 NA Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 2 4 4 80 3L 21488748 21488768 ACGGCCTTCAATTTGAATGAG 59 21488570 21488708 GGTAGCGAACATCAATGTCTG 59 NA Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 3 2 2 129 3L 21276345 21276363 TGCCATTTCCATGATGGTC 58 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 CG42337 FBgn0259239 FBtr0299857 2 1 1 81 3L 21179488 21181896 GATATTACCGATGACATAAGCGC 59 21179429 21179447 CAACTTGCGATGAAGTGGG 59 NA Drosophila melanogaster 61 CG4042 FBgn0037018 FBtr0078279 2 1 1 60 3L 20763605 20763625 ACATGGAACTTTACTACGAGG 57 20763565 20763583 AGGAACTTAAGGGAGTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5195 FBgn0036995 FBtr0078223 2 1 1 80 3L 20452466 20452543 GGAGATCCAGATATGGTGC 57 20452404 20452422 CCCTTGATGTTTCGTTCCA 58 NA Drosophila melanogaster 61 CG5872 FBgn0036991 FBtr0078194 3 1 1 81 3L 20430146 20430167 TAGAGGAGAGTCCCAATTTGAG 59 20430208 20430368 CTCGTGTTGTCTGTTCTCTG 58 NA Drosophila melanogaster 61 Las FBgn0029158 FBtr0290266 1 1 1 91 3L 20424610 20424628 TAAACGAACCCGTGAACAC 58 20424480 20424555 GTCTGGCAAATCATCTCGA 57 NA Drosophila melanogaster 61 CG5274 FBgn0036987 FBtr0078232,FBtr0078231 2 2 2 71 3L 20420614 20420632 GAAGGGCGATATGAAGCTG 58 20420509 20420579 ATCAATGTTTCCAGTCGCG 58 NA DesignRelaxed Drosophila melanogaster 61 in FBgn0001259 FBtr0078183 2 1 1 60 3L 20362487 20362508 TTCACTATGGACTGAATCTCGG 59 20362528 20362547 ATGGACTCTGTCATTTGGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Toll-9 FBgn0036978 FBtr0078240 3 1 1 81 3L 20357489 20357510 ACAACCGGTAGAAACTATACGA 59 20357214 20357451 CTATAGATTGGGATGAACTTCCG 58 NA Drosophila melanogaster 61 CG14184 FBgn0036932 FBtr0302366,FBtr0074872 2 2 2 148 3L 20021395 20021413 TAAGATTGTACTCGCAGCG 57 20021151 20021224 GAGCTTCATTTGAGCAGTG 57 NA Drosophila melanogaster 61 schuy FBgn0036925 FBtr0074899 2 1 1 207 3L 19979621 19979640 AATAGACCTTCGTTCGTGGT 59 19979808 19979891 CAGTGTTACCTTTCTGGTTGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG32207 FBgn0052207 FBtr0074983 1 1 1 124 3L 19470940 19471014 TTAAATCCGACGTCCTTGTC 58 19470835 19470853 GTAGGCCATTAGTACAGCC 57 NA Drosophila melanogaster 61 CG18136 FBgn0036839 FBtr0075040 3 1 1 93 3L 18994613 18994632 TCCATGAGACCAATACCCAC 59 18994483 18994558 CCAGAAAGTTCCTCCATTGC 59 NA Drosophila melanogaster 61 not FBgn0013717 FBtr0290259 2 1 1 97 3L 18613423 18613444 GCGATTACTTTATGTCAGATCG 57 18613280 18613367 GGAATAGAACTCCTGGAAGAG 57 NA Drosophila melanogaster 61 mRpS26 FBgn0036774 FBtr0075121 3 1 1 60 3L 18099947 18099965 CATGAGGCTACACAACCAG 58 18100085 18100103 CTCCCTTAGAAACTGACGC 58 NA DesignNoJunction Drosophila melanogaster 61 Ir75c FBgn0261401 FBtr0302292 1 1 1 80 3L 17815466 17815628 TTAGTAACAAACCAGTCCAGTC 58 17815407 17815425 AAAGTTACCTGCCTCATCG 57 NA Drosophila melanogaster 61 Cad74A FBgn0036715 FBtr0075240,FBtr0075239 2 2 2 89 3L 17363245 17363328 GTCACAGAGAATGCTGTTACTG 59 17363177 17363195 AGTAATGGTTCCGGATGGG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0075304,FBtr0075301,FBtr0113173 2 3 10 193 3L 16926442 16926460 CTCTCAACACTGCTTCTGG 58 16923956 16923975 GGTTGATAGGCTCCATAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32161 FBgn0052161 FBtr0075331 1 1 1 60 3L 16839951 16839972 GTTTGTCCTCTTCCACATAAGC 59 16839993 16840011 CCTGTAGCCTTGAAGTGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4101 FBgn0025558 FBtr0075314 3 1 1 62 3L 16605765 16605783 GCTTTATGTGGGTGCTCTC 58 16605806 16605827 TTATTCTCCATCAATACTGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13044 FBgn0036599 FBtr0075470 3 1 1 81 3L 16296125 16296209 TCAAATTGTTCGTTCTCGCT 58 16296063 16296081 CTGTAGACCAGAGGAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG13070 FBgn0036586 FBtr0075462 3 1 1 60 3L 16257099 16257119 GGGAGTGTTCAATAGCATCAG 58 16257140 16257159 CCAGCCATTGTAGTTAACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mib1 FBgn0036558 FBtr0075520 3 1 1 124 3L 16000126 16000144 CTCGAATCTGTCAGCAGCT 59 15999961 16000040 CAGGACACATAGTCTGTTCCT 59 NA Drosophila melanogaster 61 CG6114 FBgn0036544 FBtr0089527 1 1 1 80 3L 15897955 15898258 TCGAATAGTGTTGTGAATCCC 58 15897895 15897913 TGTATTGCAAGGAGATCCG 57 NA Drosophila melanogaster 61 CG6244 FBgn0036531 FBtr0075502 1 1 1 109 3L 15801626 15801697 GCGAAACTAGATAAGGCGA 57 15801769 15801788 TCGTTGAACACATCAATTGC 57 NA Drosophila melanogaster 61 CG7304 FBgn0036527 FBtr0075577,FBtr0075576 1 2 2 85 3L 15673901 15673979 AATCAAGGAACCTGAAACGC 59 15674027 15674045 ATTCAGGAGATGTGGCTGG 59 NA Drosophila melanogaster 61 CG7739 FBgn0036509 FBtr0075596 1 1 1 80 3L 15555893 15555914 ATTTCAATTCCGACGAACTCAC 59 15555775 15555855 TATAGTGCCCGAAGAGTATCTG 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 3 1 3 128 3L 15516169 15516187 TCATTTGCAAGACCTGAGG 57 15515672 15516078 TTAAATGGTCTGTCCAGAGC 57 NA Drosophila melanogaster 61 gdl-ORF39 FBgn0028377 FBtr0091756 1 1 1 277 3L 15502728 15502746 AAGAGGCGAAATTGGAGTG 58 15503042 15503060 TAGGAAATGCGTGTCTGCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0300758,FBtr0075606,FBtr0113333,FBtr0300757 2 4 4 61 3L 15486594 15486614 GATCAGTTTGTACTAACGCCT 58 15486415 15486571 TCCATGATGGACATGCCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG7804 FBgn0036496 FBtr0075617 3 1 1 193 3L 15466736 15466817 GTGTGAATCGAATTCACATCAG 58 15466564 15466582 CGCTAGATTCCGGAAACTG 58 NA InUTR Drosophila melanogaster 61 CG17177 FBgn0036440 FBtr0075710 3 1 1 80 3L 14692402 14692784 TCGGGAGATAATTCACCGG 59 14692340 14692358 CCAGTGAACTCACCTTTGG 58 NA Drosophila melanogaster 61 CG17177 FBgn0036440 FBtr0075710 2 1 1 80 3L 14692398 14692780 GAGATAATTCACCGGCGAC 58 14692336 14692354 AGATCCAGTGAACTCACCT 57 NA Drosophila melanogaster 61 CG32141 FBgn0052141 FBtr0075735 3 1 1 83 3L 14196679 14196700 TGGTGATTCTTACGATTGTCCT 59 14196744 14196821 ACATAGGCACATCGTTCCA 59 NA Drosophila melanogaster 61 Tsp68C FBgn0043550 FBtr0075751,FBtr0075752 2 2 2 60 3L 13837535 13837553 TGTGGGATGAGAAGTTCCT 57 13837576 13837595 GTCCATAGCCCTGTAATCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8750 FBgn0040812 FBtr0075802 1 1 1 61 3L 13835892 13835912 ACTGGAAGGATACTAGGTCCT 59 13835851 13835869 TTGGCCAAGAAGTTCTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8757 FBgn0036380 FBtr0075803 2 1 1 113 3L 13834805 13834827 CTTCCCTCGCTAAACATTTATCC 59 13834622 13834732 ACTGACTGTCGAAACCCTC 59 NA Drosophila melanogaster 61 CG10171 FBgn0036353 FBtr0075864 3 1 2 193 3L 13380693 13380778 AGTGACTTTGAGGAGTCCC 58 13380518 13380536 AAGAAGAACACCACCAAGC 58 NA Drosophila melanogaster 61 CG17687 FBgn0036348 FBtr0075838 2 1 1 87 3L 13346810 13346829 TATGGGCCAGTTTACAAAGC 58 13346879 13346956 TCCAGCTTCCTGAATTTGG 57 NA Drosophila melanogaster 61 vih FBgn0027936 FBtr0075958 2 1 1 84 3L 12497749 12497834 AAAGACTGCACAAGGAACTG 58 12497881 12497899 TTGAAGATGTTCTCGCCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10638 FBgn0036290 FBtr0089321 1 1 3 80 3L 12492580 12494276 GGAACCTACAATTCGAAGGAC 58 12492520 12492542 CGTATCTATATGACGATAGCCCA 59 NA Drosophila melanogaster 61 Atg12 FBgn0036255 FBtr0300011 2 1 1 67 3L 12130190 12130278 AATTTGTATCCTTCTGAACGCC 59 12130306 12130324 GATCTACGGTCCAGGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Pop2 FBgn0036239 FBtr0300272,FBtr0076058,FBtr0076059,FBtr0076060 1 4 4 80 3L 11993787 11993866 TTCAAGTTTAACCTGAGCGAG 58 11993727 11993748 CTTCTTGAACTGAATTCCGGAG 59 NA Drosophila melanogaster 61 CG14125 FBgn0036232 FBtr0076044 2 1 1 87 3L 11968018 11968103 TGCAATGAAGTTGGTCTGG 58 11968154 11968172 AGTTGGCTTGACACATTGC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Bmcp FBgn0036199 FBtr0076115,FBtr0076114 3 2 2 93 3L 11715618 11715692 ATTGATGTAATCCGGACGC 58 11715749 11715767 TATACAGCTTTGGTGTGGC 57 NA Drosophila melanogaster 61 CG6084 FBgn0086254 FBtr0076139,FBtr0076138 2 2 2 80 3L 11614636 11614654 TACAGTCCCTTGGGATCTC 57 11614514 11614593 TTCCTTGATCTTAGCCTCCT 57 NA Drosophila melanogaster 61 Ufd1-like FBgn0036136 FBtr0076223 3 1 1 93 3L 11115952 11116030 GCGGAAAGATTATTATGCCTCC 59 11115880 11115898 TTCTTGACGTTGGTCAGCT 59 NA Drosophila melanogaster 61 CG32073 FBgn0052073 FBtr0076230 1 1 1 64 3L 11100421 11100439 ACATTGGTCGCATTTGTGG 59 11100375 11100393 GATCCTGTACCGGATGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Elo68alpha FBgn0052072 FBtr0076232 2 1 1 80 3L 11095627 11095729 GAAATGCGTCTTACAAAGGC 58 11095566 11095584 CAGGATGAAGAAAGCCGTG 58 NA Drosophila melanogaster 61 CG32065 FBgn0052065 FBtr0076284 1 1 1 194 3L 10438607 10438626 TGAGCTGAGAAGTGAAACCA 59 10439994 10440466 CTTGTCTCTTGGCGAACTG 58 NA Drosophila melanogaster 61 CG32039 FBgn0052039 FBtr0076441 1 1 1 80 3L 9352445 9352463 CAAAGAGCGGAGGAAATGC 59 9352505 9352584 AGTTTGCCACCTAAGATTGGA 59 NA Drosophila melanogaster 61 rhea FBgn0260442 FBtr0076627 3 1 1 82 3L 8564750 8565126 GCCGATGTCAAGATTGAACTC 59 8565170 8565188 GATGCTCCCATTATGCCCT 59 NA Drosophila melanogaster 61 CG6983 FBgn0035896 FBtr0076659 2 1 1 86 3L 8437642 8442256 GCATCAAGACCACCATGTG 59 8437574 8437593 CCAGACCTTTGGTATGTCAC 58 NA Drosophila melanogaster 61 CG32354 FBgn0052354 FBtr0076662 3 1 1 150 3L 8409880 8409954 AAATGCTCAATTGCGGTCC 59 8409748 8409766 TTGTCATTTCGCTTCGAGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7194 FBgn0035868 FBtr0076714 1 1 1 108 3L 8297003 8297021 TATACCAAGGAAGCCGAGG 58 8296582 8296934 AGTAACTTCCTCCAAGACTGAG 59 NA Drosophila melanogaster 61 CG8012 FBgn0040832 FBtr0076699 3 1 1 184 3L 8208623 8208710 GTCTTGATGTTCGCATTGTG 58 8208857 8208875 CCATAAACCGGTGCATACG 59 NA Drosophila melanogaster 61 CG7366 FBgn0035855 FBtr0076721 3 1 1 60 3L 8195218 8195237 GAACAGTTGCGAGATCTTGG 59 8195177 8195197 GACTCAAGTTCTTCAGTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 3 2 2 108 3L 8172114 8172135 CTGACAGCCATTTACATTAGGA 58 8171964 8172045 ACTGTAGGTAAGTCTGGCT 57 NA Drosophila melanogaster 61 fan FBgn0028379 FBtr0076683 1 1 1 60 3L 8102421 8102439 ATGTGATCGTCTTTGAGGG 57 8102461 8102481 TTCTTGATGACTAGCTTCCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205,FBtr0110885 1 2 2 91 3L 7726848 7726869 GTTCCTCAAGAGCATAAATCGA 58 7726717 7726796 TGAGTTGAATGCCCTCCTC 59 NA Drosophila melanogaster 61 sphinx2 FBgn0052382 FBtr0300362 1 1 1 60 3L 7433079 7433100 TAAAGCATGTATCCGGAGTAGG 59 7432980 7433001 CTCCAGCTGCATAATTATACCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Srp19 FBgn0015298 FBtr0076879 3 1 1 117 3L 7340875 7340965 TATGGAGCGATGGATTTGC 58 7340776 7340796 GCGAATCTCAATATAGCTGGG 58 NA Drosophila melanogaster 61 CG8605 FBgn0035762 FBtr0076838 3 1 1 81 3L 7317837 7317914 GACTACAATCTCAGGCTGGA 58 7317956 7317976 CAATCTGTTCTATGTCCACCG 58 NA Drosophila melanogaster 61 CG14826 FBgn0035750 FBtr0076833,FBtr0113151 1 2 2 60 3L 7227964 7227983 GGAATTCATGGGACATCGAC 58 7228003 7228024 CTTCAAAGACCCACTATTCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 3 2 2 113 3L 7061657 7061675 GGCACTTACTCACTGAGCA 59 7061498 7061582 CATCAGGAACATCATCACCAC 59 NA Drosophila melanogaster 61 CG14823 FBgn0035734 FBtr0076908,FBtr0076906 1 2 4 131 3L 7060053 7060658 ACAACTATGCAACGCATGC 59 7060750 7060771 AGATTGCCGGAATATTATCCGT 59 NA InUTR Drosophila melanogaster 61 CG14820 FBgn0035718 FBtr0076894 1 1 1 80 3L 6926772 6926989 TCCCATGAAGTGGAACGTC 59 6927030 6927051 ATTGAGATCAGTTCCAATGCAC 59 NA Drosophila melanogaster 61 CG10289 FBgn0035688 FBtr0077019 2 1 1 81 3L 6165303 6165321 ACTGTGATCACTGTGATGG 57 6165185 6165258 TTTCTAGTGTGGGTTTCGC 58 NA Drosophila melanogaster 61 loj FBgn0061492 FBtr0301448,FBtr0301446,FBtr0301447 2 3 3 82 3L 6088576 6088755 GTGTCCTTTAGTGTGGTGC 58 6088801 6088819 TAGGGCTTCACCACTTCAC 59 NA Drosophila melanogaster 61 CG6610 FBgn0035675 FBtr0077048 1 1 1 117 3L 6068779 6068869 ATGCCATTGGAATTGGTGG 58 6068947 6068968 CCAAGAGCATATTCACAAAGTC 57 NA Drosophila melanogaster 61 Ppat-Dpck FBgn0035632 FBtr0077120 3 1 1 95 3L 5761226 5761311 CATGACGAAGGGAAAGACG 58 5761149 5761169 AGCGTATCATCTATGTCCACC 59 NA Drosophila melanogaster 61 CG10672 FBgn0035588 FBtr0077179 1 1 1 119 3L 5134025 5134043 AGAGTTCCTATCTGCTGGC 58 5133862 5133942 AATAGGCTCCCAGTAGCTC 58 NA Drosophila melanogaster 61 Con FBgn0005775 FBtr0073375 3 1 1 90 3L 4952954 4952972 AAATTGGAAACGCTGACGT 58 4940098 4952901 ATTTGTTGTCTGACACGAGC 59 NA Drosophila melanogaster 61 CG12493 FBgn0035571 FBtr0073363 1 1 1 80 3L 4753592 4753612 TGGCAATCGATGATATGAAGG 58 4753359 4753553 CCTTCAAGTCATCTGACATACC 58 NA Drosophila melanogaster 61 Cpr64Aa FBgn0035510 FBtr0073254 1 1 1 86 3L 4208554 4208899 ATGTTCATGATGGCTCCAC 57 4208486 4208504 CAATCAGTGAATAGGCGCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1136 FBgn0035490 FBtr0073203 2 1 1 89 3L 4057519 4057538 GACTACATTGCCGATAAGCA 58 4057590 4057664 TTTAATGGCGTCCTCAACG 58 NA Drosophila melanogaster 61 Gr64c FBgn0045477 FBtr0073196 2 1 1 82 3L 4031428 4031505 TAGCTTTCAATCCAAGGGCA 59 4031547 4031568 TGTTTAGTACGCGAATGATGAC 59 NA Drosophila melanogaster 61 CG14982 FBgn0035477 FBtr0073163 3 1 1 83 3L 3944546 3944565 AACTATCGACCCATTAGCCC 59 3944605 3944807 CTGGTAGTTGTATCTATATCGATCG 58 NA Drosophila melanogaster 61 Eip63F-1 FBgn0004910 FBtr0073174 1 1 1 81 3L 3913906 3913924 ATGAGGACAGCAAGGACAG 59 3913766 3913863 TCGAATACTCTAAATGCGGCT 59 NA Drosophila melanogaster 61 CG32266 FBgn0052266 FBtr0073147 1 1 1 244 3L 3790808 3790826 ATCAGCGGATATACCACCA 58 3791265 3791283 TAGGGATAGGCTCCGTAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dro3 FBgn0052283 FBtr0073060 2 1 1 60 3L 3315073 3315093 ATGACCATTGTCCTAATGGAG 57 3315113 3315133 AAGTTCCAGATAGGCAATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32277 FBgn0052277 FBtr0073103 3 1 1 60 3L 3204989 3205007 CAAATCTCACGGTTCTGGG 58 3204947 3204965 CACTGGTTCCAGTTGTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32281 FBgn0052281 FBtr0073034 2 1 1 60 3L 3169639 3169659 CCGAAAGATCGTTCAAGTTCC 59 3169680 3169699 CATAACACGTTGCACCTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14956 FBgn0035403 FBtr0073026 3 1 1 137 3L 3155812 3155967 TTGCGAATAAACCCAGTCC 58 3156068 3156086 GATCACATTCGACGGATCC 58 NA Drosophila melanogaster 61 CG32486 FBgn0052486 FBtr0073004 1 1 1 98 3L 3057575 3057651 CTACCACGAGACCAACGAG 59 3057495 3057513 TTGATCCTATCGTCGTGGG 59 NA Drosophila melanogaster 61 Jafrac2 FBgn0040308 FBtr0072982,FBtr0072983 3 2 2 80 3L 3043324 3043344 TGTGAAGCTATCATTGTCCCA 59 3043385 3043455 GGGCATACAAAGGTGAAGTC 59 NA Drosophila melanogaster 61 CG32299 FBgn0052299 FBtr0299808,FBtr0072898 2 2 2 60 3L 2389923 2389942 GTTCATCGATCGCACATTCC 59 2389822 2389903 CTTTGGCTTGATAGTAGGTCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5704 FBgn0026570 FBtr0072915 2 1 1 171 3L 2170684 2170832 ACTGAGCGATTTCGAAGCT 59 2170531 2170553 GCAGAGTACTCCTAGATAGTCAG 59 NA Drosophila melanogaster 61 CG7974 FBgn0035254 FBtr0072763 1 1 1 91 3L 1666027 1666102 CAATCGATTCAACATCGAGGA 58 1666155 1666173 GATTCGTCTGATGCTGTGC 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072808 2 1 5 189 3L 1664014 1664101 CTAGTCTTAAAGACGCACCC 58 1661517 1661535 GGATATGTTGAAGGCCTCG 58 NA InUTR Drosophila melanogaster 61 CG2277 FBgn0035204 FBtr0072729 1 1 1 60 3L 1307177 1307196 AACAAACGTACACAAACAGG 57 1307136 1307157 TTTATCGAGATTGCGTAACAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysC FBgn0004426 FBtr0072629 1 1 1 73 3L 1210596 1210614 GACCAGCTGAACAAGTGAG 59 1210651 1210669 TTCTCAGGACCAACCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 2 6 6 80 3L 998874 998893 CGAATACATAGTCAGTGCCC 58 998721 998833 AAGTTACTCAGATCCAGACGA 58 NA Drosophila melanogaster 61 CG13894 FBgn0035157 FBtr0072606 3 1 1 173 3L 694983 698873 GAAACACTGGATATTCCAGTGG 59 694831 694849 CAAGCATCCGATGATGCAG 59 NA InUTR Drosophila melanogaster 61 CG32845 FBgn0052845 FBtr0072518 2 1 1 60 3L 272707 272727 TGAAAGATGGCGAACTATCTG 58 272667 272686 CGCAACAAGATGTGATAACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072471,FBtr0072464,FBtr0072469,FBtr0072470,FBtr0072465,FBtr0302599,FBtr0072468,FBtr0072466 1 9 9 80 3L 143207 143522 TTGTCCATACGCCAAATCG 58 143565 143584 TGTTCTCAATAGCTTCCGAC 57 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 2 3 3 86 2R 20865281 20865299 ACAACATGTGCTTCTGTCC 58 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0300076,FBtr0072379 3 3 3 81 2R 20721185 20721205 CCTCACATTATCTACCTCCCG 59 20721248 20721332 GTTGGTGGGAATTCAGGTG 58 NA Drosophila melanogaster 61 Reg-5 FBgn0015801 FBtr0072427 3 1 1 171 2R 20676682 20680322 AACGAGAAGATGTCCCACC 59 20676529 20676547 GATCTAGTGCCTCCAGCTG 59 NA Drosophila melanogaster 61 CG16912 FBgn0035064 FBtr0072429 1 1 1 82 2R 20669720 20669796 TCATGGAGAAAGTGGGCTG 59 20669656 20669674 TGAGTTCCGCTAAACCCTC 59 NA Drosophila melanogaster 61 CG4563 FBgn0035006 FBtr0072355 1 1 1 82 2R 20340301 20340386 TGATTCAGATCACCGACGA 58 20340237 20340255 AAAGAATAGGGCAATCCGG 57 NA Drosophila melanogaster 61 Alas FBgn0020764 FBtr0072151 1 1 1 104 2R 19853638 19853800 CTGAAGCGAGAAGGTTTCC 58 19853868 19853886 TTCGATCAGCACGTTTGAG 58 NA Drosophila melanogaster 61 shu FBgn0003401 FBtr0072237 3 1 1 158 2R 19730593 19730668 TGTCCTATTCGGATCTCGT 57 19730453 19730471 AATATGTCCACGGTGAACG 58 NA Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072103 2 1 4 135 2R 19496193 19502124 AAGACTCAGTTGCTGTAAGGT 59 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA InUTR Drosophila melanogaster 61 CG30185 FBgn0050185 FBtr0072060 3 1 1 85 2R 19432002 19432020 AGCAAATCCTACCTGGTGG 59 19432066 19432158 GAAAGGGATTTCACAAGATCGT 59 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072030 3 1 2 114 2R 19273830 19273929 TATTTGTGAGCTGCGAATTCC 59 19273736 19273754 GGAATTGGGCTATCTTCGC 58 NA InUTR Drosophila melanogaster 61 CG30409 FBgn0050409 FBtr0072004 2 1 1 108 2R 19242484 19242560 CTACCAAAGTGTGGATTTCGA 58 19242629 19242648 TAACAGAGCTGTTAGTTGCG 58 NA InUTR Drosophila melanogaster 61 CG9861 FBgn0034844 FBtr0072002 1 1 1 80 2R 19213911 19213989 GCAGATTAAGAATACGGCTGC 59 19214031 19214049 GAGCTCACGATGCTTAGGT 59 NA Drosophila melanogaster 61 CG34445 FBgn0085474 FBtr0112749 2 1 1 75 2R 18535625 18535703 TTTGTGACCTTCTGCTGCT 59 18535568 18535587 CGCAGTAATGACTTCGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4269 FBgn0034741 FBtr0071854 3 1 1 63 2R 18486929 18486947 TAGTGGAGCAACAGAATGG 57 18487434 18487452 GTACGAGTAGTGTCACCAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 ventrally-expressed-protein-D FBgn0053200 FBtr0071826 3 1 1 137 2R 18296220 18296297 AAAGCCAAGATGATACCGC 58 18296394 18296416 GATTCTCTGATAGACCTCATACG 57 NA InUTR Drosophila melanogaster 61 CG42257 FBgn0259142 FBtr0299557 2 1 5 84 2R 17956103 17956121 GATTGCCGTGGACTTTGAG 59 17956166 17956260 AACAAGCACTGCAATTATCTCC 59 NA Drosophila melanogaster 61 CG13501 FBgn0034684 FBtr0071804 1 1 1 86 2R 17948119 17948139 CAATCACTTTCTGCAACACGA 59 17947995 17948071 ATATGATGCGTCCACTCCG 59 NA Drosophila melanogaster 61 CG13494 FBgn0034671 FBtr0071733 1 1 1 79 2R 17842218 17842236 AACATCCTCATGGAGCACC 59 17842157 17842175 TAATACCGACAGCCATGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango11 FBgn0050404 FBtr0071747,FBtr0071746 2 2 2 167 2R 17606590 17606609 AATTCCGTTGAATCGGACTC 58 17605058 17605076 CTGGCGTCTCAGATACAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG42496 FBgn0260222 FBtr0300625 3 1 1 227 2R 17579468 17579486 GAGGTGCAGAAGCAATAGC 59 17579741 17579759 GCGATTGTGGTAAATGGGT 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG42379 FBgn0259725 FBtr0299991,FBtr0299990 2 2 2 60 2R 17556972 17557049 GGCAAGTCGAACAAATAATGTC 58 17556933 17556954 AAGTCTTGAATTTCCTTCGGAG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18870 FBgn0042180 FBtr0071688 2 1 1 82 2R 17503364 17503383 ATTGGAACTGCATAACGGTG 59 17503234 17503319 CACATCCGATCTGACTCGA 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 3 9 9 87 2R 17398740 17398920 GCCAGAGGATTACGTCTATCC 59 17398969 17398987 AATCACCGACTTTAGGCCA 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 CG9754 FBgn0034617 FBtr0071615 2 1 1 60 2R 17198338 17198356 AGGTTACTGCGTCTACTGG 58 17198296 17198315 TAACTGTGCTCTGTAGCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4030 FBgn0034585 FBtr0071640 3 1 1 87 2R 16976491 16976572 TCAAACGCTTCAGATGTCG 58 16976422 16976440 GGGACAGTTGTTCACATCG 58 NA Drosophila melanogaster 61 cpa FBgn0034577 FBtr0071532 3 1 1 108 2R 16945755 16945894 CACAACGATCTGGGAAACG 59 16945966 16945984 CATCTGCCTCTACGTCCTG 59 NA Drosophila melanogaster 61 CG17999 FBgn0034552 FBtr0071561 3 1 1 81 2R 16737114 16737135 TTAACCAGTGTGATAATTGCGG 59 16736985 16737076 TGACAGTCTCTTCAGTAAACTCC 59 NA Drosophila melanogaster 61 plu FBgn0003114 FBtr0086306 3 1 1 128 2R 16151082 16151158 AATAAATGCACTCAGCTGCG 59 16150973 16150992 TTCAATAGGGCGGTATTCCC 59 NA Drosophila melanogaster 61 CG13872 FBgn0034477 FBtr0086341 1 1 1 83 2R 15768006 15768024 ATGCCCAGATGGCTTACTC 59 15767866 15767884 AAATGTACCGACGTCCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp56b FBgn0046880 FBtr0086480 1 1 1 60 2R 15586700 15586780 CTAAGCGAACTAGTAGCGG 57 15586658 15586678 GTTGAATTTGCTTGTAGGCTG 58 NA DesignNoJunction Drosophila melanogaster 61 Obp56a FBgn0034468 FBtr0086476 3 1 1 94 2R 15585326 15585585 GTTGGATCGTCCCTTAATCTG 58 15585640 15585659 TCCTCCTCGGTAAGTTTCAC 59 NA Drosophila melanogaster 61 FK506-bp2 FBgn0013954 FBtr0086515 1 1 1 116 2R 15177696 15177714 GGGCGTACAAGTAGTTCCA 59 15177954 15178033 GACGAATCGAACTTGGTGC 59 NA Drosophila melanogaster 61 cora FBgn0010434 FBtr0301279,FBtr0086508,FBtr0086506,FBtr0086509 2 4 4 81 2R 15130612 15130635 GGAACAGAAGATAACCATTCAGTC 59 15130675 15130768 CGTCGCTTCTTGTATTGCC 59 NA Drosophila melanogaster 61 CG7137 FBgn0034422 FBtr0086505 3 1 1 60 2R 15115730 15115750 GATCTGAACGAGTTCTTCCTG 58 15115772 15115790 TATAGACAGTGCCGTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18609 FBgn0034382 FBtr0086643 3 1 1 159 2R 14630986 14631063 CATACCTCAAGCGGATCCT 59 14630845 14630865 ATTGTAGACCTTCAAGACCGT 59 NA Drosophila melanogaster 61 CG15072 FBgn0034376 FBtr0113095,FBtr0113094,FBtr0086604 1 3 3 80 2R 14587448 14587528 CTTCTTTATGTCGCAAGAATGC 58 14587568 14587587 TGTTTGATAGTGTATCGCCG 58 NA Drosophila melanogaster 61 IM3 FBgn0040736 FBtr0086665 2 1 1 72 2R 14275695 14275714 ATTCCTATCACTCGCCTTCG 59 14275820 14275838 GACATTGCCAGGATTCAGG 58 NA DesignNoJunction Drosophila melanogaster 61 Dgp-1 FBgn0027836 FBtr0086774,FBtr0086773 2 2 2 85 2R 14058153 14058231 GGAAATAAGGGTTGCCGTC 58 14058086 14058104 CATTGTCCAGTTCACCGTG 59 NA Drosophila melanogaster 61 CG34194 FBgn0085223 FBtr0112387 1 1 1 87 2R 13432117 13432336 TCTTCCTCAATGTCCTCCT 57 13432387 13432405 AAGACGGTGACACAATAGC 57 NA Drosophila melanogaster 61 CG14478 FBgn0028953 FBtr0086922 2 1 2 84 2R 13348126 13348144 GTTTCGATCGGAAAGCGAC 59 13349519 13349537 TGGCTCTTAGGTATTCCGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 EDTP FBgn0027506 FBtr0086958,FBtr0086959 1 2 2 80 2R 13320625 13320706 AATCCGAAGAGATCTAGAACCA 58 13320566 13320585 ATTGGACGATGTAGACTCCT 58 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086994 2 1 7 80 2R 13249534 13249553 GCATTCCAGTTTATCAGCCC 59 13249594 13260593 GGTGTCCAGTAAATGAGACTG 58 NA Drosophila melanogaster 61 NiPp1 FBgn0026402 FBtr0087058 3 1 1 90 2R 12892050 12892069 CAACATCATGGAAGACCTGC 59 12891918 12891999 TGTGAGATTATCAAGCTCCGT 59 NA Drosophila melanogaster 61 Nach FBgn0024319 FBtr0089587,FBtr0089588,FBtr0087116 3 3 3 82 2R 12541203 12541224 ACACATTGATTACGACGTACAG 58 12541076 12541164 CTAAGCCCGAATAGAACTTATCG 59 NA Drosophila melanogaster 61 CG30096 FBgn0050096 FBtr0289994 1 1 1 83 2R 12209405 12209496 ACGACAGGAATATACGAATTCC 58 12209289 12209307 GTTTCCCTGCTTCCATTGG 59 NA InUTR Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 2 2 2 60 2R 12034470 12034491 AGACGATGACATCATAATGCTG 58 12034373 12034449 TCGCCAAACTTCATAGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Strn-Mlck FBgn0013988 FBtr0087275,FBtr0302794,FBtr0087274,FBtr0087276,FBtr0302792,FBtr0302796,FBtr0302790,FBtr0302791,FBtr0302793 1 9 13 80 2R 11836642 11836722 ATTTGCTACGTGCTACTCTC 57 11836581 11836603 CGCTCTAGTTATATTCGAGAAGG 58 NA Drosophila melanogaster 61 sli FBgn0003425 FBtr0087304,FBtr0112832,FBtr0112831,FBtr0087302,FBtr0087303 3 5 5 91 2R 11764736 11764754 GGAGCTGTATCTGGAGTCC 59 11764594 11764681 TGTTGCTGAGATCGAGTCG 59 NA Drosophila melanogaster 61 CG33460 FBgn0053460 FBtr0100642 2 1 1 141 2R 11582008 11582028 GATATCCCAATGAATTGCCAG 57 11582131 11582221 ACCGGCATAATGTAGTCTG 57 NA Drosophila melanogaster 61 unc-5 FBgn0034013 FBtr0087382 2 1 1 81 2R 11245725 11245743 CAACTATAGCTGCAGTGCG 59 11245788 11246094 GCCACCGTTGACATAAACG 59 NA Drosophila melanogaster 61 Hex-C FBgn0001187 FBtr0087399 3 1 1 60 2R 11107034 11107054 GGAGTGTGATTGTAAATGCTG 57 11106994 11107012 ACAAAGTCCAACTGACCAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8093 FBgn0033999 FBtr0087401 1 1 1 91 2R 11102936 11103026 GTTCGGTGACAACTGTCAC 59 11102863 11102884 CATTGTGAGGATGTAACCATCC 59 NA Drosophila melanogaster 61 CG34186 FBgn0085215 FBtr0112379 2 1 1 125 2R 11032889 11032910 GGCAATGACCTATATTTGTGGA 58 11032586 11032692 AAGACAACAAGACGCTTGG 58 NA Drosophila melanogaster 61 HPS FBgn0033973 FBtr0087449 2 1 1 60 2R 10743943 10743964 GAACCTCGAATCGTTTATTGTG 58 10743984 10744003 TCGCTGTTTCAGATATCGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12860 FBgn0033954 FBtr0087480 1 1 1 61 2R 10553767 10553785 TGCGACATACCCTACAAGC 59 10553724 10553742 AAACGTACGGCCAAATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12869 FBgn0033943 FBtr0087496 2 1 1 99 2R 10480377 10480464 TCTCATTGGGCTCAAGGTC 59 10480525 10480545 AAATCGTAGTTCGTTGATGGG 58 NA Drosophila melanogaster 61 CG30197 FBgn0050197 FBtr0087494 3 1 1 165 2R 10401806 10401824 AGGTTCAGAACTGTACGCC 59 10401952 10402318 GTAGCTCCAGAGTTCTTGCT 59 NA Drosophila melanogaster 61 CG30075 FBgn0050075 FBtr0087555 1 1 1 60 2R 10263609 10263627 ACCAATCACTAAGCTCCGA 58 10263650 10263669 TGTGCCTTCCGATAGATCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ih FBgn0028428 FBtr0290292,FBtr0290109,FBtr0100370,FBtr0100372,FBtr0100369,FBtr0290110 3 6 7 81 2R 10184941 10185103 CAACTACAACTGCAGATCCC 58 10185147 10185165 GGTAACTACGTCGGAAACG 58 NA Drosophila melanogaster 61 Hsc70-5 FBgn0001220 FBtr0087568 3 1 1 87 2R 10143215 10143351 TAGCATGTTCCGCAATCTG 58 10142885 10142904 AATAACAGCACCTTTGACCT 57 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0112795,FBtr0112796,FBtr0290035,FBtr0087528,FBtr0087527,FBtr0290034,FBtr0087529 1 8 8 97 2R 10063959 10063977 GTCAAAGGCCTTACAGCTG 58 10064034 10064125 GTGATAACTCTTTGTGTTCCAGG 59 NA Drosophila melanogaster 61 CG18368 FBgn0033864 FBtr0087627 2 1 1 60 2R 9555402 9555420 GTCTGTCATCAACCCAGTC 57 9555442 9555462 CAGATCCATTGCTCTTTACCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 AttC FBgn0041579 FBtr0087653 3 1 1 200 2R 9281583 9281666 CTACAACAATCATGGACACGG 59 9281828 9281846 ATGTGGGAGTAGTCCAGTG 58 NA Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 1 2 2 60 2R 9134728 9134746 AACACCATCTTCGCTTTGG 58 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34312 FBgn0085341 FBtr0112510 2 1 1 67 2R 9097801 9097819 TTGTCATCCACTTTGCCCA 59 9097694 9097773 TTTGGATTTCACCCAAACAGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 bic FBgn0000181 FBtr0087783,FBtr0087782 1 2 2 60 2R 8758036 8758056 CAAGAAGCTGTCGGTAAACAC 59 8758075 8758096 ATCGTTCTTGATGATGTTCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33792 FBgn0053792 FBtr0091796 1 1 1 114 2R 8520438 8520462 GGAGGCATTAACTGATATTAAGGTG 59 8520631 8520650 CGTCAAATGGCTAATAGCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087999 3 1 2 138 2R 8141849 8141934 AAAGCTGCTAAATACCACCG 58 8142035 8142053 GACGCTCTTCAACTTCTCG 58 NA InUTR Drosophila melanogaster 61 Cyp6t3 FBgn0033697 FBtr0087993 2 1 1 76 2R 8079341 8079361 CCGCATGTGGATTTCATAGTG 59 8079399 8079478 AACCTTTCATCGCGATGGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 2 2 2 86 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877123 7877143 CTGATTTACGATACCGATGGC 59 NA Drosophila melanogaster 61 CG8298 FBgn0033673 FBtr0088044,FBtr0088043 1 2 2 85 2R 7877001 7877075 CAGGAGTGCATAGAGACCG 59 7877122 7877142 TGATTTACGATACCGATGGCA 59 NA Drosophila melanogaster 61 CG13192 FBgn0033653 FBtr0088031 2 1 1 91 2R 7713842 7713860 ATGTGATGGAATTGGCCCA 59 7713914 7713996 AATCAACTTGTCGGTTGGAC 58 NA Drosophila melanogaster 61 CG13193 FBgn0033650 FBtr0088029 2 1 1 114 2R 7656040 7656539 GATTCGGACCAACTCTTCGA 59 7656616 7656634 ATGTCCAGGTTCAGCTCAC 59 NA Drosophila melanogaster 61 inv FBgn0001269 FBtr0088068,FBtr0088070,FBtr0088069,FBtr0088067 3 4 4 273 2R 7364680 7364698 AGGAGCATCCGGTAAATCG 59 7393727 7394165 GTTGAACTCGTGCTTCAGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG34054 FBgn0054054 FBtr0100109 3 1 1 91 2R 7297500 7297603 ATAATACTTGCTGGCCAGTC 57 7297428 7297447 GTGGAGCTTACTACATTCGG 58 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299854 1 1 4 80 2R 7182286 7182378 TTGGTCTCCATATTCGCTCTC 59 7182226 7182246 CAGTTTCTCCTGCTTCTTGAG 59 NA Drosophila melanogaster 61 CG13223 FBgn0033599 FBtr0088113 1 1 1 80 2R 7145163 7145242 CCTACATAGCCTACATAATAGTTCG 58 7145279 7145298 GAATCATTAGGATCAGCGCA 58 NA Drosophila melanogaster 61 Syx6 FBgn0037084 FBtr0088103 3 1 3 192 2R 7107192 7107211 CTAAATGACGTGGAGACGAG 58 7108116 7108441 CAACGATGCTGATAGTGTCC 58 NA InUTR Drosophila melanogaster 61 Obp47a FBgn0033573 FBtr0088199 3 1 2 69 2R 6797462 6797480 AAATGTTCGCTTTGAGCGA 58 6797578 6797596 TCATCAGCCACGGTTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG18003 FBgn0061356 FBtr0100229,FBtr0100230,FBtr0301704 2 3 3 60 2R 6771530 6771619 TACAAGGATCGTACCATAACGG 59 6771639 6771658 CTTTGAAGTTCGCCTTCTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 StIP FBgn0033540 FBtr0088212 3 1 1 81 2R 6533467 6533537 GGATCCAAAGTTTCAAGGCA 58 6533580 6533599 CCACCTCACAGTGTTTACTC 58 NA Drosophila melanogaster 61 CG12133 FBgn0033469 FBtr0088386 3 1 1 81 2R 5855252 5855274 GTACTACACGAGAAATGGAAGAC 59 5855311 5855397 GATCTGAAGAGTGTATTTCACCC 59 NA Drosophila melanogaster 61 CG30000 FBgn0050000 FBtr0088463 2 1 1 104 2R 5493792 5493810 ATTGACCGACGAATATCGC 58 5493878 5493960 GCGAGATATCGCACTATGG 58 NA Drosophila melanogaster 61 Map60 FBgn0010342 FBtr0088530 1 1 1 80 2R 5478740 5478758 GTGGAAGCTCTTCAGTCTG 57 5478799 5478884 ATGGGTACTTGATCATTCTCCT 58 NA Drosophila melanogaster 61 CG33757 FBgn0053757 FBtr0091758 2 1 1 153 2R 5342181 5342263 ATGTTCATATGCGTTTGGAGC 59 5342048 5342070 GTCATTGGGATGTAAGGTTTCAG 59 NA Drosophila melanogaster 61 CG8229 FBgn0033356 FBtr0290278,FBtr0290279 1 2 2 94 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838217 4838236 GAAGGTTAAACGGAAAGCGT 59 NA Nonspecific, InUTR Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 3 3 3 82 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619836 4619857 GAACTTCGAGATGAAGAAGTCG 59 NA Drosophila melanogaster 61 CG12376 FBgn0033323 FBtr0088706 1 1 1 80 2R 4591029 4591117 AATGGCCATTAAAGCTTTGC 58 4591158 4591178 ATAGCATAAATGGCTTCCTCG 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088701,FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100429,FBtr0100431,FBtr0100428,FBtr0100427,FBtr0100426 1 9 9 80 2R 4566363 4566440 AGTTGCTCATTGCATCACC 58 4566484 4566502 AGCAGCGTCTTAAACTTGG 58 NA Drosophila melanogaster 61 Vps25 FBgn0022027 FBtr0088694 2 1 1 81 2R 4513069 4513141 ACCCTTCTTTACACTACAGCC 59 4513178 4513202 GAGGTATTTGAGAAAGAGATCTGTC 59 NA Drosophila melanogaster 61 CG11669 FBgn0033296 FBtr0088757 3 1 1 91 2R 4357648 4357666 GAACTGAGGAAATCGTCGC 59 4357351 4357594 GAGATGTAACGCTTCACCAC 59 NA Drosophila melanogaster 61 CG11669 FBgn0033296 FBtr0088757 1 1 1 80 2R 4357350 4357592 GGTGAAGCGTTACATCTCC 58 4357288 4357309 TATAAATCCACAGTGACACCCT 59 NA Drosophila melanogaster 61 Rs1 FBgn0021995 FBtr0088788 1 1 1 84 2R 4053362 4053380 ATTGTCATTGCAACGCCAG 59 4053424 4053630 GAATGAGAACCTCAATGGAATCC 59 NA Drosophila melanogaster 61 kermit FBgn0010504 FBtr0088814 3 1 4 123 2R 4035888 4036441 CTCAGTAGGATCAGTAACAGGA 58 4035786 4035805 CATGATTGACTGGGATTGGA 57 NA InUTR Drosophila melanogaster 61 CG2137 FBgn0033190 FBtr0088907 1 1 1 60 2R 3424680 3424698 GGGTGGTTACAAACCTCTG 58 3424720 3424740 GTTCTTGAAACGGGTATGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088973 1 1 3 99 2R 3330878 3330956 CATGTAAGCGCCTCAAGTG 59 3331016 3331037 CCATAGTAGATACGACCCAGAG 59 NA InUTR Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 2 2 2 80 2R 2558898 2559027 GGACAAGTTCTACTGGTACGA 59 2558838 2558859 CCCAGCAGTGAATAGATAAAGC 59 NA Drosophila melanogaster 61 CG14593 FBgn0033058 FBtr0301687,FBtr0085975 1 2 2 85 2R 1952499 1952517 TCCTACCCTGTGTTCACAG 58 1952564 1953388 ACCATGAACTTTGCATACTCC 58 NA Drosophila melanogaster 61 CG34212 FBgn0085241 FBtr0112405,FBtr0302826 1 2 2 91 2R 1937564 1937582 CTCATGGCCTTCCTGTCTC 59 1937491 1937509 GATGTGGTGTTGAACGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dream FBgn0033051 FBtr0086028 3 1 1 166 2R 1909110 1909128 CTATAGCACGTACGAGGGA 58 1908903 1908980 GAATTTGGCGGTCTTTGGA 58 NA Drosophila melanogaster 61 CG12551 FBgn0033045 FBtr0086048 3 1 1 82 2R 1808652 1808670 GTTCCAAGCATTCACTGGC 59 1808716 1808734 TTTCTTTGACGACTCGGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Me28S-A2958 FBgn0086037 FBtr0114313 3 1 1 60 2L 16417847 16417865 GTGGATGATTGCAATTGCG 58 16417805 16417824 TTAACGCCAGTTGGTAATCG 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 snRNA:U2:34ABb FBgn0004192 FBtr0080443 1 1 1 60 2L 13215904 13215923 TAGTTCCTCCATTGGAGGAC 58 13215946 13215964 TAGCACTCCGTCTGATTCC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3305 FBgn0032949 FBtr0085896 3 1 1 117 2L 21573548 21574793 ACTAAGCAGTACAGTGTTCTC 57 21574872 21574890 TGAGATTGTTGAGGAGCTG 57 NA Drosophila melanogaster 61 CG9248 FBgn0032923 FBtr0081470,FBtr0081471 2 2 2 82 2L 21159139 21159157 GACAAATGGTGACGGTGTC 59 21159277 21159295 GTACTGATGCAGTCGTGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG9257 FBgn0032916 FBtr0081465 1 1 1 60 2L 21103145 21103163 GAATAGCTTCGGACTACGG 57 21103187 21103205 TCGTCATGTTCCTGTACCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RPA2 FBgn0032906 FBtr0081438 2 1 1 87 2L 20925323 20925341 GAGCAATGTTTCCGAGGAG 58 20925165 20925275 CAGAATGTTGGTCAACTCAGAG 59 NA Drosophila melanogaster 61 CG31675 FBgn0051675 FBtr0081429 3 1 1 113 2L 20868100 20868118 AATCACCAGCGAGAAAGGT 59 20868195 20868366 CACTTGATGGCGTAAGCTG 59 NA InUTR Drosophila melanogaster 61 CG14402 FBgn0032894 FBtr0081425 1 1 1 60 2L 20849632 20849650 TCTGAAAGGACCTCACCTC 58 20849674 20849692 CTGCACAACAGGCTAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheB38c FBgn0032888 FBtr0081452 3 1 2 80 2L 20820558 20820640 CTATCGAATTTCTGCTAGGATGAG 59 20820501 20820521 GGCGTCAGAGTGTTAAATACG 59 NA Drosophila melanogaster 61 Hr38 FBgn0014859 FBtr0301347,FBtr0081397,FBtr0081398 2 3 3 102 2L 20687063 20687265 CTAACCCTGATCACAGAACG 58 20686980 20686998 CATTGTAGGTGACGTGGTC 58 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301720,FBtr0301721,FBtr0301719 3 3 4 99 2L 19956311 19956329 GGAAAGTCCTATCTGGCCC 59 19956390 19956481 TGTGGTCAACATTGAATGTGG 59 NA Drosophila melanogaster 61 CG10463 FBgn0032819 FBtr0081290 2 1 1 182 2L 19759331 19759349 CCAAGGGAGAAGATTTGGG 57 19759494 19759591 CTTGGAGTTCTGAACTGACG 58 NA Drosophila melanogaster 61 CG13081 FBgn0032804 FBtr0081252 2 1 1 85 2L 19541155 19541173 GATTCCTGAGCTAGCCCAG 59 19541222 19541302 GTTGAGTTGGAGATCGGCT 59 NA Drosophila melanogaster 61 CG10166 FBgn0032799 FBtr0081279 3 1 1 100 2L 19525871 19525960 GTCATCATCCCAAATTCATTCC 57 19525792 19525810 AAAGACACCTCCATTTCCG 57 NA Drosophila melanogaster 61 CG13084 FBgn0032788 FBtr0081240 1 1 1 60 2L 19485856 19485874 ATCTGGAACAGGTGTGGAG 59 19485957 19485975 TGGTTTCCAGAGTGCTCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13085 FBgn0032780 FBtr0081203 1 1 1 174 2L 19426682 19429405 GAGGAAGAAATCAAGTGTGCA 58 19429541 19429559 ATGCTGAACCTCAAGTCCC 59 NA InUTR Drosophila melanogaster 61 l(2)37Ce FBgn0086446 FBtr0081157 1 1 1 132 2L 19132352 19132370 TCCTTCTCACCTTCGTGAG 59 19132533 19132551 ACGAGAAGGTGATGTCACC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10348 FBgn0032707 FBtr0301647 2 1 1 60 2L 18716409 18716427 GAAAGATGCTTCCTAGCCC 58 18716367 18716388 GTGGGTATTAATCCTAAGGCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10178 FBgn0032684 FBtr0081068 2 1 1 84 2L 18512376 18512458 TCAATTGAAGGACCTCTACCT 58 18512504 18512522 GATCGATACTACGGTGAGC 57 NA Drosophila melanogaster 61 CG31788 FBgn0051788 FBtr0081056 3 1 1 241 2L 18257754 18257834 TTGAGTCTTTCGATTGGACCT 59 18257533 18257553 CATGTGTATTCTTGTCAGGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Arr1 FBgn0000120 FBtr0081030 2 1 1 80 2L 18079711 18079962 CCTCGACCACACTTATTGC 58 18080006 18080024 AAAGCTTGACCTTCACAGC 58 NA Drosophila melanogaster 61 Gr36b FBgn0045486 FBtr0080963 3 1 1 83 2L 17179842 17179921 CTGGAGGAATCCTTTGAAAGTC 59 17179964 17179983 CGTGATAGGGAACATACCCA 59 NA Drosophila melanogaster 61 CG31806 FBgn0051806 FBtr0080952 3 1 1 67 2L 16985095 16985113 AAAGTTGGTGCAATCGCTG 59 16985144 16985162 CAATCAAGCGGATGACGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31807 FBgn0051807 FBtr0080944 3 1 1 62 2L 16682329 16682347 AGACTCGCTCGTTGATGAG 59 16682285 16682303 TCCTTTCCGCTAAGAGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5968 FBgn0032588 FBtr0080872 1 1 1 60 2L 16549704 16549723 GATTCCTGCAGAAACTCGAC 59 16549607 16549626 ATCAATGTCTCGAAGGTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 3 3 3 83 2L 15958576 15958708 GGACTCGAGCATATGTCTG 57 15958755 15958773 TTGTAGCAAGCATTAGCGT 57 NA Drosophila melanogaster 61 CG18477 FBgn0028864 FBtr0080756 3 1 1 80 2L 15661259 15661512 CCCAAGAACCTAATAATCAAGGAG 59 15661551 15661569 CGAGTTGACAAATCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 2 3 9 155 2L 15261840 15261929 GAACTCATCTGCTCGTTGG 58 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 CG34166 FBgn0085195 FBtr0112357,FBtr0301737 1 2 2 286 2L 14743257 14743275 TAGAACGCTTTCGACAGTG 57 14743599 14743617 TAGTAACGTCCACCGTGTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 nimC2 FBgn0028939 FBtr0080588 2 1 2 99 2L 13980264 13980623 AAACAAGCTCACGAGTGTG 58 13980682 13980704 GACTTACATAACCCTTTCCACAC 59 NA Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559,FBtr0080558 2 2 2 211 2L 13934640 13934660 CATACAAGCCCATCTTGATCG 59 13933648 13933666 GATGGTCCGTATCCGTAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16886 FBgn0028938 FBtr0080560 3 1 1 94 2L 13922452 13922534 GCCCGTTAAGGTTCATGTG 59 13922376 13922394 TTTCGACTGGATAGGGAGC 58 NA Drosophila melanogaster 61 CG14947 FBgn0032406 FBtr0080297 3 1 1 60 2L 12077251 12077269 GTCGACACGAAATCAGGAC 58 12077288 12077311 GGTATTAGTTAACCTGGTACTGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nup160 FBgn0260937 FBtr0080199 1 1 1 80 2L 11123964 11124047 AAATTAACACGGGAACCCAG 58 11124087 11124108 TCGTATTCTTGTAGCAATAGCC 58 NA Drosophila melanogaster 61 Ge-1 FBgn0032340 FBtr0080232,FBtr0080231 1 2 2 80 2L 11095997 11096017 GTTCTACTGTCGCTCATTCAG 58 11095862 11095957 TGCCTCGTTGAGATATCTCTG 59 NA Drosophila melanogaster 61 CG16833 FBgn0026147 FBtr0300402,FBtr0300404,FBtr0300403,FBtr0300401,FBtr0300400 1 5 5 80 2L 10993660 10993748 AAGACCGGAATGAGTATGTG 57 10993790 10993809 CATCCTCGGCTATGATAAGG 57 NA Drosophila melanogaster 61 CG18302 FBgn0032266 FBtr0080095 3 1 1 82 2L 10535693 10535777 GACCATTAGTGTTTATTGCCAG 57 10535819 10535838 CTTATGTATCAGGCTTCGCC 58 NA Drosophila melanogaster 61 CG5362 FBgn0032237 FBtr0080050 1 1 1 67 2L 10394929 10396217 ATGGCTGAACCAATTCGTG 58 10394880 10394898 ATGTACAGCAGGGAGTAGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 pim FBgn0003087 FBtr0080001 3 1 1 148 2L 10363131 10363214 CATTAATTTGCCAGCGAATCC 58 10363321 10363342 CAATACTACCCTCGAGTTTCAG 58 NA Drosophila melanogaster 61 chico FBgn0024248 FBtr0080088 3 1 1 80 2L 10245584 10245667 CACTCACCTTATGACCACGT 59 10245523 10245541 GTAGGTTCCGGTGATTCCA 59 NA Drosophila melanogaster 61 CG4908 FBgn0032195 FBtr0079949 1 1 2 166 2L 10222694 10223150 TCAATGCCGACAAGATGAC 58 10223280 10223298 CAGGGTAATCATGCAGTGC 59 NA InUTR Drosophila melanogaster 61 CG5727 FBgn0032193 FBtr0079958 3 1 1 115 2L 10210155 10210232 TCAGGAAGTACACTCAGAGGA 59 10210060 10210080 GCTGTAACGATTCTTCCATCC 59 NA Drosophila melanogaster 61 CG4036 FBgn0032149 FBtr0079870 2 1 1 137 2L 9791683 9791761 ACCTATGCCAAACCTCTCC 59 9791862 9791880 CCATTGATGTACATGGGCG 59 NA Drosophila melanogaster 61 Cyp4e3 FBgn0015035 FBtr0079925 1 1 1 80 2L 9748647 9748725 ATGTCCAGAGGAAATTGTATCG 58 9748588 9748608 CTATCTCCTGGAAACTGACAC 57 NA Drosophila melanogaster 61 CG3838 FBgn0032130 FBtr0079835,FBtr0079834 2 2 2 87 2L 9571676 9571694 CTTCAACATCCGCTTCGTC 59 9571745 9571851 CTGATTATCCCTGTTGCGG 58 NA Drosophila melanogaster 61 CG4438 FBgn0032115 FBtr0079813 2 1 1 196 2L 9397897 9397915 TTTCTACGGCTCTTTGCAG 58 9397659 9397677 AATCGTCCTCTGACTCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17005 FBgn0032109 FBtr0273186 1 1 1 80 2L 9327953 9328023 ATAACGGGCTTGAATCGGA 59 9328067 9328085 GTGGATCTGGCGAATAGGT 59 NA Drosophila melanogaster 61 CG9466 FBgn0032068 FBtr0079742 3 1 1 80 2L 8774293 8774313 GGGTCATTTCTCAACCTAAGG 58 8774173 8774252 CCAACTTGATCAGCGATGTC 59 NA Drosophila melanogaster 61 baf FBgn0031977 FBtr0079535 2 1 1 114 2L 8029725 8029825 TTCGATATGGCCTACACCG 59 8029903 8029921 AATCGGATGCCTGTTTGGA 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 1 4 5 60 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 TwdlE FBgn0031957 FBtr0079563 3 1 1 120 2L 7860769 7860787 CAGTAACCAGTAACAGCCA 57 7860586 7860685 CCATGAGGACCACTAACAC 57 NA Nonspecific, InUTR Drosophila melanogaster 61 lectin-28C FBgn0040099 FBtr0079527 3 1 1 60 2L 7857744 7857764 TTGAAATGGAATCCTGGAGAG 57 7857786 7857804 GTATAGAAACGCAACGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7115 FBgn0027515 FBtr0079523,FBtr0079524 1 2 2 80 2L 7823090 7823465 ATGGAGGATAGGTTTATTATCGAGG 59 7823503 7823521 GCCATGACCGTCAAATACG 59 NA Drosophila melanogaster 61 Herp FBgn0031950 FBtr0079493,FBtr0079494 3 2 2 87 2L 7797722 7798171 GACTCTACGTTCTACGTTGC 58 7797654 7797672 AGCAATCAGTGGGACTGAG 59 NA Drosophila melanogaster 61 CG13795 FBgn0031937 FBtr0300709 3 1 1 89 2L 7725653 7725940 CATGGGCATTCTTGGAATACTG 59 7725585 7725604 AACTGACCCATGAAGGAGTG 59 NA Drosophila melanogaster 61 CG13791 FBgn0031923 FBtr0079521 3 1 1 61 2L 7578290 7578308 CAGGCAATTGCAATACCAG 57 7578247 7578270 CTGTCAGCATATCTATATTCTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Gr28a FBgn0041247 FBtr0079463 3 1 1 91 2L 7453313 7453550 TGTTAAACGAAATCCTGCAGG 59 7453242 7453260 GTGATTGACAACCGAGTGC 59 NA Drosophila melanogaster 61 smt3 FBgn0026170 FBtr0079356 3 1 1 81 2L 6967382 6967524 GAATTTGAGGAAATCAGCACG 58 6967321 6967339 TTGAAGCTGCTAAGTGGTC 57 NA InUTR Drosophila melanogaster 61 CG32829 FBgn0052829 FBtr0079370 3 1 1 60 2L 6915970 6915992 CATCAAGGAGAAGAAGTTCTACG 59 6915932 6915953 TCCATACTTCTTATGATGTCCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TTLL3A FBgn0031854 FBtr0079305 3 1 1 101 2L 6737653 6737672 ATCGAGATCAACTCCAGTCC 59 6737520 6737591 GCGATCGATAACAACCTTGAC 59 NA Drosophila melanogaster 61 CG9596 FBgn0031832 FBtr0079332 1 1 1 97 2L 6560513 6560595 TCAAATAGTGGTAGAGAAGGAGC 59 6560438 6560456 ACCAGACTGTCGAATTCGG 59 NA Drosophila melanogaster 61 CG31637 FBgn0051637 FBtr0079287 2 1 1 80 2L 6525755 6525776 AGTTCCACATATCGAGATTCCA 59 6525813 6525897 CTGGATTTGCTTGATCTCTTCTG 59 NA Drosophila melanogaster 61 CG9150 FBgn0031775 FBtr0302213 2 1 1 117 2L 6067955 6067973 ATCTTCCCGGAAGAGATCC 58 6067799 6067877 TTTCATGTACCTGAACATGAGG 58 NA Drosophila melanogaster 61 CG9029 FBgn0031746 FBtr0079143 3 1 1 287 2L 5886035 5886053 GTATTTGCATTCGCCTGTG 57 5886369 5886387 AGTTTCTAGGAGCGGAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11147 FBgn0031734 FBtr0079165,FBtr0079166 1 2 2 80 2L 5736113 5736198 CCAAACAGGCAAATTGTATTGG 59 5736054 5736075 ACTTGATCATGATGTTGGTAGG 58 NA Drosophila melanogaster 61 CG7236 FBgn0031730 FBtr0079133 3 1 1 81 2L 5712352 5712370 CAAGAGGTTTGTGGAGTCC 58 5712414 5712490 CTTCAGGTTCTTCAGTAGCC 58 NA Drosophila melanogaster 61 CG7277 FBgn0031713 FBtr0079128 2 1 1 60 2L 5531697 5531715 CAGCACGATAACTTTGCCA 58 5531655 5531676 CATCCAGGATCAAATCGTTCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34126 FBgn0083962 FBtr0290010 1 1 1 80 2L 4991068 4991153 CACGGATAATTATAGGCACAAGAC 59 4991192 4991210 CTTATATCGTCCTGGGCGG 59 NA Drosophila melanogaster 61 CG15429 FBgn0031596 FBtr0077428 1 1 1 85 2L 4353121 4353140 TGCTGGGTGATCATACACAG 59 4353188 4353260 TAGTCCAGTGTGCGATTCC 59 NA Drosophila melanogaster 61 CG2818 FBgn0031566 FBtr0077537,FBtr0077538 2 2 2 96 2L 3716096 3716166 CCCAGTCAGGTGAATCTGG 59 3716223 3716244 GTTCCTTTAACAGCTTGATGGT 59 NA Drosophila melanogaster 61 sec5 FBgn0031537 FBtr0077519 1 1 1 80 2L 3458183 3458258 GGAAACATCCATAGAGAACTCC 58 3458299 3458317 GAATCCGCCTTCTCTTTGC 59 NA Drosophila melanogaster 61 CG9641 FBgn0031483 FBtr0077677,FBtr0077676 2 2 2 133 2L 2975263 2975282 GTAGAGGTCACTCCTGAAGC 59 2975078 2975167 TCCATGAATCCCGTTACCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0077621,FBtr0077623 2 2 3 200 2L 2856383 2856401 GTCCAACAGGATCATCCAC 57 2856564 2856645 CACGCTTAGAAGTTCTTGGT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 oho23B FBgn0015521 FBtr0077623 3 1 3 155 2L 2856560 2856643 CATTACCAAGAACTTCTAAGCG 57 2856853 2856873 CCCGTAAATTCTTAGTGGCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 3 2 4 80 2L 2490668 2490740 AGCGACATAATCTTCCGGT 58 2490606 2490625 AAAGGTAGTCATCCGTCTCC 59 NA Drosophila melanogaster 61 CG3609 FBgn0031418 FBtr0077791 2 1 1 111 2L 2372911 2372929 CTTGACCTACAGTGGTGGG 59 2372759 2372840 GAAGTCAATCAGGGTAACTTGTC 59 NA Drosophila melanogaster 61 CG31681 FBgn0051681 FBtr0077802 2 1 1 60 2L 2286160 2286178 ATAGGCATGGTTAGCTGGG 59 2286118 2286138 CAATATCTTCGTAGACGCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)s5379 FBgn0010704 FBtr0100674,FBtr0077840,FBtr0100673 2 3 3 85 2L 2229506 2229527 GAGGCACTTAAACACATTAAGG 57 2229573 2229653 GGATTCCAGGTTTCACCAC 58 NA Drosophila melanogaster 61 CG34174 FBgn0085203 FBtr0112365 2 1 1 97 2L 2214876 2215023 AAGTTGCCGGTAACATTGC 59 2215084 2215102 ATGGACATAGGAGTCCACG 58 NA Drosophila melanogaster 61 CG10874 FBgn0031395 FBtr0077848 1 1 2 120 2L 2191942 2191960 TGACCTATGTGAATGAGCG 57 2191069 2191859 TCATCACGATCTTTCAGGAG 57 NA Drosophila melanogaster 61 CG31933 FBgn0051933 FBtr0077896 2 1 1 60 2L 1822977 1822997 GACATCGACAGAATCTTGCAG 59 1822937 1822958 AATAGCACTTTATCTGCCAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 2 4 4 81 2L 1694369 1694387 CATGTACAAAGGCGAGGTC 58 1694432 1694555 ACCTTTGACCTGCAAACTC 58 NA Drosophila melanogaster 61 CG18132 FBgn0031345 FBtr0077919 1 1 1 60 2L 1517270 1517290 GCACGATACTTAAGCTGAGAG 58 1517230 1517248 AAGAACGTCCCATCTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5565 FBgn0031335 FBtr0077944 2 1 1 97 2L 1355618 1355710 CCTTGATAGATAGCGAAGGCA 59 1355541 1355559 CATATGCTGCGTCTGATCG 59 NA Drosophila melanogaster 61 CG5011 FBgn0040723 FBtr0077973 3 1 1 61 2L 1201042 1201060 TGGTCCGTATCCATATGGT 57 1201085 1201103 CTTATCGCGGATGCATTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5139 FBgn0031323 FBtr0077977 3 1 1 60 2L 1198698 1198716 GAGGATGTACGACCAGGAG 59 1198656 1198677 ATACAGATCCTGTTCCTCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tgt FBgn0031321 FBtr0077971 3 1 1 115 2L 1184240 1184326 ACTGATGACCCTAAGGCAC 59 1184405 1184423 GAATCTGGCAGTTCAGCTC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1135a FBgn0083012 FBtr0113575 2 1 1 65 X 17040731 17040749 GTCATGGGTAGAATGGGCA 59 17040684 17040705 TGATATCTTCAAGCACTAGGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33252 FBgn0053252 FBtr0074346 2 1 1 81 X 16791018 16791038 CGTCTGGAAATTCTCGAACAC 59 16790878 16790976 ATTTGAGAACGCTCGAAGGA 59 NA Drosophila melanogaster 61 CG11695 FBgn0030316 FBtr0300872,FBtr0073513 2 2 2 125 X 11471082 11471102 GAGCTAATTGAGAAACACCTG 57 11471255 11471273 TTTCTTCATCACCATGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1986 FBgn0030162 FBtr0071395 2 1 1 81 X 9804450 9804529 GCAAGAGTTATTGCTAACTTGG 58 9804390 9804408 GTTCTGCGACAGATTTCCC 58 NA Drosophila melanogaster 61 CG13650 FBgn0039277 FBtr0113286 3 1 1 83 3R 20936666 20936686 CCTTACTTCGTGTCATATGCT 58 20936540 20936622 AACTTGCAGCTTGTTTAGGT 58 NA Drosophila melanogaster 61 Spase22-23 FBgn0039172 FBtr0084564 1 1 1 60 3R 20055567 20055587 CTTTCTTGACTACCGTACCGA 59 20055527 20055546 GACATTCTTCACCAGCACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31457 FBgn0051457 FBtr0084405 2 1 1 80 3R 18952757 18952836 GAGTTACTGGACGATGAACCA 59 18952697 18952715 GTTGATCTCAACCATGGGC 58 NA Drosophila melanogaster 61 CG6300 FBgn0038730 FBtr0083798 2 1 1 137 3R 15598688 15598764 TTACTGCCCAGATCTCTGC 59 15598569 15598588 TATTCCTGCCTATGATGCCC 59 NA Drosophila melanogaster 61 CG8032 FBgn0037606 FBtr0081880 1 1 1 83 3R 4490464 4491171 ATCAGAAGATAGAACTTGGCG 58 4491216 4491234 CTAGACCATGTTGTACGGC 58 NA Drosophila melanogaster 61 Gnf1 FBgn0004913 FBtr0100159 2 1 2 112 3R 733739 733757 TGAAGACTCTGGATGTGGT 57 733832 733913 CAAATTGTGATTGGTCACGT 57 NA Drosophila melanogaster 61 ppl FBgn0027945 FBtr0078412 1 1 1 90 3L 21273886 21273965 GTTGCTATGAGAAGGGCTG 58 21273814 21273833 AAGGCTTTGTACTGATCCTC 57 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 3 4 4 88 3L 15593708 15593797 CAAGTTCAAGGTCTCTACGA 57 15593848 15593866 AGTACTCATAGTTGTCGCG 57 NA Drosophila melanogaster 61 CG10973 FBgn0036306 FBtr0100354 3 1 2 170 3L 12747711 12747788 CTAAGCTTGCAGAATGTTCTG 57 12747236 12747254 CAAGATCACCAAAGCTGCT 58 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301156,FBtr0301158,FBtr0089561,FBtr0301154,FBtr0089563,FBtr0301157,FBtr0089568 2 7 13 86 3L 8620818 8627689 CATTGTGAATCAGCCCTACC 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 Mov34 FBgn0002787 FBtr0072290 2 1 1 143 2R 20290866 20290884 GATGTGTCCAACAGCTTCG 59 20291058 20291076 GTGATACCATCCCACAACC 57 NA DesignNoJunction Drosophila melanogaster 61 ytr FBgn0021895 FBtr0072234 2 1 1 183 2R 19736319 19738108 GAGTCGGCGATCTAGATCG 59 19736154 19736172 CGATTTACCCTCCAGGTCC 59 NA Drosophila melanogaster 61 CG4797 FBgn0034909 FBtr0072240,FBtr0072239 1 2 2 81 2R 19701895 19701913 AAGGTGGTGATCTTTGCAC 58 19701013 19701850 TTTCCGCAATGTACACCTG 58 NA Drosophila melanogaster 61 fab1 FBgn0028741 FBtr0089554,FBtr0089555 2 2 2 61 2R 13663247 13663268 CAATCAGCAAGGTGAAATTGTC 58 13663145 13663225 GCTTTGACCAGGACATCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG30046 FBgn0050046 FBtr0087895 2 1 1 80 2R 8203102 8203178 CCACCTATACGTCATCCGA 58 8203222 8203240 GCGGATCATTGGGAAAGTC 59 NA Drosophila melanogaster 61 CG13168 FBgn0033705 FBtr0087998,FBtr0087999 2 2 2 74 2R 8142448 8142468 TCTATCTGATGAAGGTCGAGG 58 8142502 8142578 CAATTTCGTTCTGAATGGCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 2 2 2 85 2R 5763388 5763409 AACGATTATAAGCTGGATCCCA 59 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0113050 2 1 2 145 2R 3677996 3678074 CTTGAGGGAATTATCCTACGC 58 3678236 3678255 TTAAGTAGAGGAACATGGCG 57 NA Drosophila melanogaster 61 Orc1 FBgn0022772 FBtr0088959 2 1 1 86 2R 3410768 3410849 GCTGATGGGTAAAGTCACC 58 3410700 3410718 GTAACGATCTCTTGCAGCT 57 NA Drosophila melanogaster 61 CG6453 FBgn0032643 FBtr0080998 2 1 1 139 2L 17483264 17483282 CCGCGTATTAAGTCTCTGC 58 17483078 17483161 AGTTCAGCTTGTTCTTCGC 58 NA Drosophila melanogaster 61 CG18095 FBgn0028872 FBtr0080606 2 1 1 199 2L 14030852 14030872 TCTTCAGTTTCTCAGTCAACG 58 14030489 14030691 GACTTATGTTGAGGCGCTC 58 NA Drosophila melanogaster 61 t-cup FBgn0051858 FBtr0080381 1 1 1 60 2L 12497152 12497173 GACTGTTTCGAAATTACTGGCT 59 12497113 12497133 CAGATTCAATTTGATTGGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31670 FBgn0031375 FBtr0077870 1 1 1 189 2L 1952869 1954321 TTTACTTTAGTCCGCGTGG 57 1952698 1952717 TCCATGATCTTGGCTATCGA 58 NA Drosophila melanogaster 61 CG2794 FBgn0031265 FBtr0078067 1 1 1 60 2L 564551 564569 GTGATTAAGTGCTCCCGTC 58 564593 564611 TTCCACCACTCTGTCTCCT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tango14 FBgn0031312 FBtr0077961 1 1 1 156 2L 1159324 1159342 GATCTCTGTCGATCCACCA 58 1159462 1159768 TGATTTGATGGAGCTGCAG 58 NA Drosophila melanogaster 61 CG12506 FBgn0031276 FBtr0078003 3 1 1 155 2L 773757 773775 GAAGGACAACAGGGAGGTC 59 773894 773912 AGAGGAAACCTCTGTGCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0302167,FBtr0084715 2 2 2 129 3R 20743978 20744353 ACATAGCCGCTACCTAGTG 58 20744446 20744464 CATGTCGTTTGCTCGAGTG 59 NA InUTR Drosophila melanogaster 61 CG5897 FBgn0036220 FBtr0076070,FBtr0302207 1 2 2 60 3L 11881378 11881399 TAACATATTAACGCCACCATCC 58 11881339 11881360 ATCCCGTTGATAATACTTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12184 FBgn0025387 FBtr0070696 1 1 1 176 X 4523919 4523940 ATATAGGAATCGAGTTGGTCTG 57 4523711 4523782 CTGTAGGCACCTTCAACTG 58 NA Drosophila melanogaster 61 CG33477 FBgn0053477 FBtr0088320 2 1 1 60 2R 6296747 6296766 ATCCATTTGGTCGCTTTCAG 59 6296706 6296724 AACGGCTTACGACTTTCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4p1 FBgn0015037 FBtr0088592 2 1 1 80 2R 5128945 5129019 GCACATAGATGATGACCTGAG 58 5129057 5129079 GTTTCCTTCATGAAGTACTCCAG 59 NA Drosophila melanogaster 61 Akap200 FBgn0027932 FBtr0079664,FBtr0079667 3 2 4 70 2L 8429454 8430290 AACAACAAGGTGGATCTCG 57 8430324 8430342 TCCTGTGTTGTAACGTCTG 57 NA DesignRelaxed Drosophila melanogaster 61 Tig FBgn0011722 FBtr0079275 2 1 1 86 2L 6422509 6423136 ATAAGAACTCGCATCACAGGA 59 6422443 6422461 GATAGGTCTCGTAGCCCTG 58 NA InUTR Drosophila melanogaster 61 CG12576 FBgn0031190 FBtr0077366,FBtr0077365 3 2 2 87 X 21879075 21879093 CTGGTACTGACCATCCTGG 59 21878280 21879024 ACTGAAAGTCCCTGTGCTC 59 NA Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071467 3 1 3 101 X 10268304 10268387 AGTCGTTCACATAATCGCCA 59 10268222 10268240 CGGGTATCTTGGTTACGGT 59 NA InUTR Drosophila melanogaster 61 CG18273 FBgn0029525 FBtr0070094 1 1 1 80 X 379109 379132 TTGTTCTATACAGGGATCTCAGTC 59 378990 379076 GCATAAGATCTATTAGTAGCTCCAG 58 NA Drosophila melanogaster 61 mRpL1 FBgn0037566 FBtr0081832 1 1 1 80 3R 4127776 4127854 CACCAAGGGAAATAATGAAGTC 57 4127893 4127913 ATATCCTTAATGAGCTCCACG 57 NA Drosophila melanogaster 61 CG13541 FBgn0034841 FBtr0072001 3 1 1 107 2R 19172286 19172304 ATGAGACCCTTATCCAGCG 59 19172438 19172456 CACGGGATATGTGGATTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302708,FBtr0302702,FBtr0302703,FBtr0302707,FBtr0302701,FBtr0302704,FBtr0302706,FBtr0302705 1 8 8 80 2R 17194539 17194558 GCATCACGATCAGTTCATGG 59 17194600 17194687 AGTTTGGGTCGCAATTTCTC 59 NA Drosophila melanogaster 61 CG8503 FBgn0033917 FBtr0087536 1 1 1 89 2R 10131563 10131639 CATCCATTCAAGATCGCCC 58 10131691 10131710 CTCCTTCAGGACTATCTCGT 58 NA Drosophila melanogaster 61 CG33644 FBgn0053644 FBtr0091621 3 1 1 112 2L 13532347 13532365 AGTTGATTGCCGATGAGCT 60 13532512 13532534 GGGTATAACCTTTGGATTGATGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11356 FBgn0030375 FBtr0073635 3 1 1 81 X 11997079 11997220 CGATGTAAATATGCAGGTTTGG 58 11997019 11997039 ACGATGTCTATGAACTTGAGC 58 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 1 2 2 69 X 19564761 19564841 TCTGCCGTACATGAAGGTC 59 19564874 19564892 GTACTCATTGAGGGCCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14196 FBgn0031002 FBtr0074691 1 1 1 60 X 19131963 19131983 GCCTTCTGTGAAACCTTTCTC 59 19131765 19131941 TGCCAAAGCCAAACAACAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 2 1 1 89 X 19072141 19072160 GAAGACCGAGGAAGAATTGC 59 19071994 19072089 CTCTTCTGGGAAGCTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 3 3 7 170 X 18007409 18007493 AGAAGAAACTCAGGTTGCTG 58 18003571 18003592 CGTAATACTCTTCGCAAATCTC 57 NA Drosophila melanogaster 61 l(1)G0222 FBgn0028343 FBtr0301415,FBtr0301413,FBtr0301414 2 3 3 80 X 17469920 17469939 GTTCAGTTTGGGTTCGAGAG 58 17469785 17469878 GATTATCGGAATGGGCTTGC 59 NA Drosophila melanogaster 61 CG8568 FBgn0030841 FBtr0074436 2 1 1 144 X 17345163 17346089 ATTCGATCAGAAAGTGTGCG 59 17345038 17345056 CATCATGACGGGAATGCAG 59 NA Drosophila melanogaster 61 Anxb11 FBgn0030749 FBtr0074303,FBtr0074302 2 2 2 106 X 16312123 16312141 GATCCGTGTGATCATCACG 58 16311919 16311997 AAGTATCGCCCTTGATCCA 58 NA Drosophila melanogaster 61 CG9914 FBgn0030737 FBtr0074240 3 1 1 171 X 16201881 16201899 CCAACACCATCCTCTCCAG 59 16201486 16201504 GTCTTCTTCACCCATTCCG 58 NA DesignNoJunction Drosophila melanogaster 61 hep FBgn0010303 FBtr0073748,FBtr0073747 3 2 3 108 X 12979781 12979873 ATTTCGTCATCAAGTGCCTC 58 12979692 12979710 GGCACATCTACTTTGGCTG 58 NA Drosophila melanogaster 61 CG32643 FBgn0052643 FBtr0073716 3 1 1 60 X 12878860 12878878 GATTACCGGATGGCTTTGC 59 12878900 12878920 CAGTATTCTGTTGGTCAAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11727 FBgn0030299 FBtr0073546,FBtr0300732,FBtr0073547,FBtr0300733 3 4 4 80 X 11329629 11329647 AAATTCACCGAGCAAAGCC 59 11329500 11329586 GAGCATTTCCGAGTTCTTGG 59 NA Drosophila melanogaster 61 CG15312 FBgn0030174 FBtr0071421,FBtr0071423,FBtr0071422 1 3 3 80 X 9955175 9955259 AGCACGATAGTTCAGACTGG 59 9955114 9955134 CGCAAAGCATACGTAGATTCC 59 NA Drosophila melanogaster 61 CG34449 FBgn0085478 FBtr0112754,FBtr0112755,FBtr0112753 3 3 3 81 X 9232369 9232388 TCACCTGTAAGTTCTATCGC 57 9232242 9232326 CAGTGATGATCGAAGGTCTC 57 NA Drosophila melanogaster 61 CG2147 FBgn0030025 FBtr0071166 3 1 1 181 X 8134910 8134983 GTTTCCTGGATCCCTGACTC 59 8135122 8135145 GTGCTGTAGGTATTGATAGTTGTG 59 NA Drosophila melanogaster 61 Nek2 FBgn0029970 FBtr0071142 2 1 1 60 X 7785278 7785299 TGTGCAATACTACCATCATCTG 58 7785239 7785259 CTCCATAACAATGTACACCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ogre FBgn0004646 FBtr0071037,FBtr0071036 2 2 2 80 X 6868809 6868827 ACGTGTTCATCTGGTTCTG 57 6868669 6868766 TAAAGATAATGCAGCCACGG 58 NA Drosophila melanogaster 61 kdn FBgn0086133 FBtr0070906 3 1 2 61 X 6244961 6244980 AACATGCCTGATATGCAGGA 59 6252951 6252969 ATCATGCGAACATAGGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG32750 FBgn0052750 FBtr0070881 3 1 1 135 X 6089850 6089869 CTTCGGTCATTTCATCTGCT 58 6089676 6089752 AAATTGAGAGGCTGTGAGG 57 NA Drosophila melanogaster 61 CG4151 FBgn0029770 FBtr0070779 2 1 1 212 X 5395911 5395929 GCAAGTTCACCATTTGCCT 59 5396105 5396123 TGGGTTCGAGTCCATTGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10803 FBgn0029666 FBtr0070569 2 1 1 104 X 3381472 3381493 GCATAGCGTCTACGAAATATCC 59 3381557 3381642 CCAGAAAGGTATTTGCCCAG 59 NA Drosophila melanogaster 61 eIF2B-beta FBgn0024996 FBtr0070479 1 1 1 80 X 2598893 2598911 TAACCAACAAGACGCTGGA 59 2598954 2599042 CAATCTGCATGAGAGCATCG 59 NA Drosophila melanogaster 61 ph-p FBgn0004861 FBtr0070432,FBtr0301515 3 2 2 150 X 2024124 2024142 CTTACAGAATGCTGCAGGA 57 2023931 2024013 CACGTTGCATTGAATAATCTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Unc-76 FBgn0040395 FBtr0070376,FBtr0070377 1 2 2 80 X 1985914 1986004 CCTGATCAAGATTCTCAAGGC 58 1986045 1986064 AGCACCTTCAGGATGTAGTC 59 NA Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 2 2 2 94 X 1758267 1758287 AGGAATATTCAAGCAACAGCG 59 1758131 1758217 GGTTTAGTAAATATGCTGAAGTCCC 60 NA Drosophila melanogaster 61 pck FBgn0013720 FBtr0070256,FBtr0070255,FBtr0100198 1 3 3 87 X 1365558 1365576 ATCCGACTGCCTCTTAAGG 58 1365627 1365699 TGAACAGAGACGAGATGGC 59 NA Drosophila melanogaster 61 Su(Ste):CR42407 FBgn0259838 FBtr0300135 2 1 1 279 U 5759238 5759258 TCCTCACCAAAGAATATCGGA 58 5758979 5758999 GAATGAGAGCTTGAAATGACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40551 FBgn0085496 FBtr0302523 2 1 1 80 U 2792419 2792497 AAACCTTGAAACACGGCAG 59 2792541 2792559 ATCCTCCACGTTGATGGTG 59 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 3 4 4 122 U 1092306 1092326 CCAGATCTAAGTTGCGATCCT 59 1092151 1092226 GTAAAGAGAATTCACTGCTCGAC 59 NA Drosophila melanogaster 61 unc-13 FBgn0025726 FBtr0089246,FBtr0089245,FBtr0089247 1 3 3 80 4 894546 894634 ACAATTCGCTATCAGTTTGGAG 59 894487 894508 CCTCCTTTAATAGAAAGCAGCA 58 NA Drosophila melanogaster 61 CG32006 FBgn0052006 FBtr0089170 3 1 1 88 4 173538 173619 TACCAACACTCCCATTTCTG 57 173670 173688 TTGAATTTGAAGCCAGCAC 57 NA Drosophila melanogaster 61 sip3 FBgn0039875 FBtr0085842 1 1 1 81 3R 27598513 27598587 TAAGCAAGATCTTCCTGGGC 59 27598631 27598649 GTCTCCGTAAGGGCATACC 59 NA Drosophila melanogaster 61 chp FBgn0000313 FBtr0085778 1 1 1 80 3R 27034407 27034429 CATTCAAGTACTTCGATACCGTC 59 27034251 27034370 GCTTAAATGCATCTTCCCTCAG 59 NA Drosophila melanogaster 61 Jon99Ciii FBgn0003357 FBtr0085502 3 1 1 133 3R 25748098 25748116 CAAGGTGCCTTACATCGTG 58 25748212 25748231 AGTTGATGGTCACTCCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1894 FBgn0039585 FBtr0085290 2 1 1 83 3R 24310404 24310423 TTAAAGTATCAGCCGTTGGG 58 24310469 24310568 GGCATTAGTCAATTGCAGG 57 NA Drosophila melanogaster 61 Gr98c FBgn0046886 FBtr0085187 3 1 1 83 3R 23370970 23370989 ATGGACTTACCATTCTGCAC 58 23371034 23371109 CCAAACGATTGAGTTGACAG 57 NA Drosophila melanogaster 61 Cpr97Eb FBgn0039481 FBtr0085135 3 1 1 113 3R 22916316 22916709 TGAAATTGACCTTGAGCTTGG 59 22916223 22916241 CGTTGTGCTTGTCGATCTG 59 NA Drosophila melanogaster 61 Ets97D FBgn0004510 FBtr0085088 1 1 1 91 3R 22737261 22737340 TCAAGAGCTCTGATTCCGT 58 22737188 22737208 CTGCACTTGTCCATTATTCCC 59 NA Drosophila melanogaster 61 malpha FBgn0002732 FBtr0084956 1 1 1 60 3R 21836811 21836830 CTGGAATCGCTAGAATCCGT 59 21836852 21836871 CATAGTAGGCCTCCTCAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mst57Db FBgn0011669 FBtr0084915 3 1 1 91 3R 21656592 21656610 CACTTGTTCTGCTCTTTGC 57 21656519 21656539 GGGACTATTGATGTGGATCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpS27 FBgn0039300 FBtr0084868 3 1 1 162 3R 21072258 21072276 CTACAGGATCACCACCGTC 59 21072048 21072066 AATTTGTGGTTCATCGCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13643 FBgn0040601 FBtr0084722 1 1 1 92 3R 20725648 20725666 CTACATCGACCACAACCAC 58 20725513 20725594 CTAAATCTTGCTTCGAGTCGT 58 NA Drosophila melanogaster 61 HdacX FBgn0051119 FBtr0084734 1 1 1 115 3R 20681659 20681733 CATTCACAAGCTCCTGTGC 59 20681562 20681584 GTGACTTTAGGTATTCCCTTGTG 59 NA Drosophila melanogaster 61 ana1 FBgn0039206 FBtr0084646,FBtr0084645 3 2 2 82 3R 20358455 20358474 GGATTGTGCTGAATTAACGG 57 20358516 20358593 GTATAATGTTAGCATCGGTTGG 57 NA Drosophila melanogaster 61 CG33108 FBgn0053108 FBtr0084504,FBtr0300647 3 2 2 89 3R 19821615 19821634 GCTATTTAAGTCGCGTCTGC 59 19821686 19821769 CACAAGTAGGTCCCACCTG 59 NA Drosophila melanogaster 61 CG31142 FBgn0047114 FBtr0084492 3 1 1 139 3R 19755126 19755248 GTGGCAAAGATAAGCTATGCA 59 19755344 19755367 CTTATGGTTTCATAGAAGGCACTC 59 NA Drosophila melanogaster 61 CG33111 FBgn0053111 FBtr0084529,FBtr0084530,FBtr0100312 2 3 3 104 3R 19631552 19631570 CCATATTGCCGGACATAGC 58 19627948 19631484 ATCAGAGCGTCAAGACCTG 59 NA Drosophila melanogaster 61 CG10177 FBgn0039083 FBtr0084424 1 1 1 60 3R 19346577 19346598 GGAGATACCTATATGGAGGCAG 59 19346538 19346556 CGATGATGTTTGGATGCGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nha2 FBgn0051052 FBtr0084367 1 1 1 86 3R 18811931 18812039 CTCAACGACTTCGCTTACC 58 18811863 18811881 ATCGAGCCGTAGAGATAGC 58 NA Drosophila melanogaster 61 CG17618 FBgn0040587 FBtr0113328 1 1 1 90 3R 18553136 18553154 CTCCTTTGATGCCGAATCG 59 18553208 18554577 GCCCGTTCAACATCTTTCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Nop56 FBgn0038964 FBtr0084230 2 1 1 153 3R 18246038 18246121 AGCTGGTCAAGGGATTCAC 59 18245903 18245923 ACGTCCTTATCCAACTGATCC 59 NA Drosophila melanogaster 61 CG34008 FBgn0054008 FBtr0100063 1 1 1 60 3R 16407094 16407169 CAGTTCCTACGAGGAGCAC 59 16407052 16407070 TAGATCTCCTAAGGCGGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG31244 FBgn0051244 FBtr0083772 3 1 1 60 3R 15223758 15223776 AATTCTGAAGGAGTGCGAG 57 15223716 15223737 GTCCATGGGTATACTATAGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 koko FBgn0051232 FBtr0083628,FBtr0083626,FBtr0083627,FBtr0083625,FBtr0083629 3 5 6 81 3R 14229546 14229624 CGATGAGTTCCTCATTGCC 58 14229668 14229687 GACATCGCGTATCTTGACAC 59 NA Drosophila melanogaster 61 CG5863 FBgn0038507 FBtr0083439 2 1 1 60 3R 13237879 13237898 TGTTCATCATTGGAGGTCAG 57 13237915 13237939 GTAGCACTCATTACATAATCTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cal1 FBgn0038478 FBtr0083400 1 1 1 70 3R 12914166 12914184 GTCTACGAGCGCTCTAAGG 59 12914275 12914293 ATTTCCATGCCGTCTTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG14905 FBgn0038452 FBtr0083357 3 1 1 82 3R 12450056 12450134 CGCGAAAGAACACCAATAGAG 59 12449994 12450012 CTCATTCTGGAGCACCCTC 59 NA Drosophila melanogaster 61 tara FBgn0040071 FBtr0083258 3 1 2 231 3R 12069042 12082508 GTGCACTGAGGTGAATTCC 58 12082702 12082721 GTTGTTGGACTCAACAGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 Sap47 FBgn0013334 FBtr0083208,FBtr0083207,FBtr0083206,FBtr0083209,FBtr0083205,FBtr0083210,FBtr0301655,FBtr0083204 1 8 8 80 3R 11780337 11780357 TTTGGATCCTTCTTGTCATCG 58 11780394 11780480 GTCGAGAATGGTATTATCCTTGAC 59 NA Drosophila melanogaster 61 CG6171 FBgn0026737 FBtr0112926,FBtr0083113 1 2 2 148 3R 11189029 11189108 GATGCTACAGGCGAAATCC 58 11188899 11188917 GAAGTGAACTGGGTTACGG 58 NA Drosophila melanogaster 61 Npc2b FBgn0038198 FBtr0082889,FBtr0082888 3 2 2 80 3R 9917053 9917074 AGGATTATTTGTGATCTTCGCC 59 9917115 9917540 TTCGATTTGGATTTCGGGC 58 NA Nonspecific Drosophila melanogaster 61 CG34308 FBgn0085337 FBtr0112504 3 1 1 60 3R 8915234 8915257 GATTAGGAGTCAGAAATATCAGGC 59 8915276 8915294 GTTCTCACCGATCAGGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 kar FBgn0001296 FBtr0302563,FBtr0082666 3 2 2 142 3R 8509986 8510005 TATTTCAAGCGGTACCTGGG 59 8509804 8509882 GAAACGAGGCTCATTATCCG 58 NA Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0082607 1 1 2 60 3R 8194941 8194959 TGTACATCGCGAGTTTCAC 58 8194272 8194292 GCAGGTAGTAGAAGTCAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42505 FBgn0260231 FBtr0300638 1 1 1 80 3R 7857084 7857159 TGGGTCGTATTAGGAGTTGC 59 7857023 7857044 GAATGTCCACCGTATTAAACGA 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG34307 FBgn0085336 FBtr0301079 1 1 1 80 3R 7723558 7723578 CAGTGCTCTCATAGTGATTCG 58 7723616 7723697 GTTAGAATTGGGTATATGGCCAC 59 NA Drosophila melanogaster 61 RhoL FBgn0014380 FBtr0082124 2 1 1 91 3R 5323662 5323681 ATCGGGACTACAATCTGACC 59 5323513 5323608 GAAGCAGTTGGTACTGGGA 59 NA Drosophila melanogaster 61 CG18249 FBgn0037553 FBtr0300896 2 1 2 110 3R 4047487 4047505 GAAGGTTTCGCCATTGGAG 59 4047578 4047657 ATTCACTGGAGCTTTGTTCG 58 NA Drosophila melanogaster 61 exba FBgn0250753 FBtr0078750,FBtr0078748,FBtr0078744,FBtr0078747,FBtr0078749,FBtr0078746,FBtr0078745 3 7 7 80 3R 1423970 1423991 TATTCGTAAAGGGCTTTACTCC 58 1423645 1423931 GTACAGAACCGTTGACTAACC 58 NA Drosophila melanogaster 61 CG12007 FBgn0037293 FBtr0078842 1 1 1 60 3R 954330 954348 GACCCTGGAACAGAATCCC 59 954370 954390 GTACTTGTTGCACAGTTTCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR15821 FBgn0035311 FBtr0072914 1 1 1 80 3L 2172684 2172758 CCAGTTACCGAATGCAAGG 58 2172622 2172641 TTCCGTTCGATTTCCATACC 58 NA Drosophila melanogaster 61 Snap25 FBgn0011288 FBtr0111143,FBtr0111142 1 2 2 80 3L 24247014 24251603 ATTGGCAGGATAACGAACGA 59 24251640 24251664 GAGATTGCCTATCATAGTGTTTACC 59 NA Drosophila melanogaster 61 Ddx1 FBgn0015075 FBtr0078492 3 1 1 100 3L 22256591 22256663 ATTCGAAGAGTTTGGCGTG 58 22256780 22256798 GGATCAGAGGAATGGCCTC 59 NA Drosophila melanogaster 61 msopa FBgn0004414 FBtr0078482 2 1 1 66 3L 22075937 22075955 ACTTCATACAGATCGCCGT 58 22075985 22076003 GGATCTTCCTGTGGTCTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7402 FBgn0036768 FBtr0075143 1 1 1 80 3L 17883322 17883417 ACTTACGCTGGTATGATTTCC 58 17883458 17883477 ATTCAGCATGCCATTATCCT 57 NA Drosophila melanogaster 61 CG33052 FBgn0053052 FBtr0075229 2 1 1 60 3L 17421027 17421046 CCAAGCTGGAAAGTGATCTG 59 17420986 17421004 GCATTGTCGATCTGCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9701 FBgn0036659 FBtr0075321 2 1 1 84 3L 16731209 16731819 TTGGCTCAAGGTCTATCCC 58 16731867 16731885 CGTAACGATTATCTCGGGC 58 NA Drosophila melanogaster 61 CG13060 FBgn0036606 FBtr0075370 3 1 1 64 3L 16313030 16313110 TCAAATTTATCGGCGTCATCG 59 16313136 16313154 GTGAGTCTCGATGAGACCA 58 NA DesignRelaxed Drosophila melanogaster 61 CG13047 FBgn0036594 FBtr0289964 2 1 1 96 3L 16278460 16278479 TTAGACAAACCCAACCACAG 58 16278305 16278323 CCAGTGGAGCTACAACTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG16959 FBgn0036481 FBtr0075655,FBtr0075656 3 2 2 193 3L 15114041 15114173 TATGAGCTGGACACTCCTG 58 15113866 15113884 AACTCATTGGGTCCACAGG 59 NA DesignRelaxed Drosophila melanogaster 61 HGTX FBgn0040318 FBtr0114619,FBtr0075720 3 2 2 85 3L 14583159 14583177 AGCAAACCAAGTATCTGGC 58 14577189 14583110 GAACCAGACCTTAACCTGC 58 NA Drosophila melanogaster 61 CG11279 FBgn0036342 FBtr0075887 2 1 1 82 3L 13040199 13040217 AAGAAGGCCAAGCTACCAG 59 13040263 13040344 ATTGGCGCATTTGATCGAC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 eIF-2beta FBgn0004926 FBtr0075968 2 1 1 113 3L 12518770 12519096 CAAAGAGAACGACGAGGAC 58 12518675 12518693 ATGTCCGGATTCTTGTCGA 58 NA Drosophila melanogaster 61 byn FBgn0011723 FBtr0076039 1 1 1 80 3L 11927571 11927589 CAATTACTGGAACGCCACC 59 11927629 11928077 GAGTTATGAGATGAGATGTTGCG 59 NA Drosophila melanogaster 61 CG33272 FBgn0053272 FBtr0076159 1 1 1 78 3L 11503622 11503641 GCTTCCTCTGCTAGTAACAC 58 11503563 11503581 TTGTTGTGGTTGATGCTGC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Ilp1 FBgn0044051 FBtr0076328 3 1 1 73 3L 9791664 9791682 GAAACCACAAACTCTGCGG 59 9791718 9791737 CAGCGTATTAAAGCCATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8562 FBgn0035779 FBtr0076854 2 1 1 80 3L 7391414 7391434 TCTCTGGGTTTGTTAGTCCTC 59 7391475 7391579 CTCATAGATGCGGTAACCCT 59 NA Drosophila melanogaster 61 CTCF FBgn0035769 FBtr0076878 2 1 1 100 3L 7347074 7347154 CTTTGGTTTCGAGGACGAC 58 7346992 7347012 CAATCATATCCATCAGCTGCA 58 NA Drosophila melanogaster 61 CG10591 FBgn0035621 FBtr0077128 3 1 1 91 3L 5592753 5592776 GAGAAATCCGAAGTACATCATGAG 59 5592624 5592642 ATTTCACCAACGAAGCCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Aats-ala-m FBgn0028962 FBtr0077168 1 1 1 80 3L 5141762 5141841 ATCTGATCAATCGCGTTATCTG 58 5141880 5141900 CATTCTGCTCCAGAACTTCAG 59 NA Drosophila melanogaster 61 CG1120 FBgn0035462 FBtr0073148 2 1 1 80 3L 3806999 3807071 GTTTCAGTGCTATAGCCACC 58 3807114 3807132 TGAGGGCATTTGTTAGGGA 58 NA Drosophila melanogaster 61 CG14965 FBgn0035414 FBtr0073109 3 1 1 60 3L 3192056 3192080 CCTAATACCACCTAAAGATTTCGAG 59 3192020 3192039 ATTCTGTGTCTCACCATCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9973 FBgn0035378 FBtr0113128 1 1 1 252 3L 2870166 2870184 CAAGGTCGAGAAGTTGCTG 58 2869581 2869950 CTTCTTGGACTGCTTGTCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG15879 FBgn0035309 FBtr0072916 1 1 1 124 3L 2168774 2168964 TCTAAGCGATTTCAAGGAGGT 59 2168670 2168688 AGGTTCCCAGATTGTCCAG 59 NA Drosophila melanogaster 61 CG13917 FBgn0035237 FBtr0072747 3 1 1 133 3L 1597421 1597440 ATCTGTACAGGAAGTGCCTG 59 1597535 1597626 ATCCGATGTCATGTAAGCGA 59 NA Drosophila melanogaster 61 msd5 FBgn0035210 FBtr0072724 2 1 1 60 3L 1333078 1333099 AGATTTCAGCAGCATTTCATCC 59 1333039 1333058 TAGGTTTCTCACATGTTGCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30430 FBgn0050430 FBtr0072448 2 1 1 132 2R 21016978 21016997 ATTTAGTCTTACCCTGGCCT 58 21017148 21017166 GTAGCAAGTTCCACAGCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RpL41 FBgn0066084 FBtr0100231 1 1 1 80 2R 20791307 20791417 AAATGAGAGCTAAGTGGCG 57 20791245 20791263 CTTACTTGGACCTTGCACG 58 NA InUTR Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0302165,FBtr0072179 2 2 2 80 2R 19960474 19960559 GTGGCCATTAAGTACGATCC 58 19960598 19960620 CATGTACAGATACTGCATCATCG 59 NA Drosophila melanogaster 61 CG3493 FBgn0034854 FBtr0072036 1 1 1 87 2R 19259681 19259699 GTATCCATGCAACACAGCG 59 19259547 19259631 TGTTCCCAGTTAGGTACTGG 58 NA Drosophila melanogaster 61 px FBgn0003175 FBtr0112821,FBtr0071838,FBtr0112820 3 3 3 79 2R 18428466 18430836 AGGCATCTCATAAACCGGA 58 18428405 18428423 GAAAGTGGTTCTTTCGGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13500 FBgn0034683 FBtr0071805 2 1 1 60 2R 17944748 17944767 TCGATTGTTCTACAAGGGAC 57 17944707 17944725 AATGAAGAGCGCTTTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ppcdc FBgn0050290 FBtr0071672 2 1 1 70 2R 17579824 17579844 CGGATTTGTTGGTAATAGCCC 59 17579876 17579951 ATTATCGCAAATCCCGGTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9418 FBgn0026582 FBtr0071573 2 1 1 64 2R 17034169 17034187 AAGTTGCCCTACATCGAGG 59 17034274 17034292 AACATTTGCAACTGCTCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG13443 FBgn0034548 FBtr0086239 1 1 1 99 2R 16661259 16661277 TAATCCAGTCTTGTGCCCT 58 16661413 16661432 TTGTAGGCATAGACATCGAC 57 NA DesignNoJunction Drosophila melanogaster 61 l(2)05510 FBgn0028622 FBtr0086258 1 1 1 80 2R 16451352 16451370 CAGCGAACAAGGTCTACGA 59 16451217 16451310 GGACCTCATTCTTGTTGACAC 59 NA Drosophila melanogaster 61 CG13422 FBgn0034511 FBtr0086214 2 1 1 60 2R 16414122 16414143 TGTTCTGTACTATTGGACAACG 58 16414161 16414182 CTGGTTGTAGTTGTGATAGTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 betaTub56D FBgn0003887 FBtr0086536 1 1 4 60 2R 15338967 15338985 ATCGTTCACATCCAAGCTG 58 15336239 15338943 TGATCTCCCAGAACTTGGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 2 10 10 80 2R 15298012 15298105 CAACAAGAGTCACTTTGTCCT 58 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 adp FBgn0000057 FBtr0086744 2 1 1 217 2R 14040036 14040057 CCAAATGTCTGGCTATAAATCC 57 14040298 14040319 GCCATTGAACGTAAGATAAGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG5036 FBgn0028743 FBtr0301142 1 1 1 86 2R 13685112 13685203 CATATCCGAGATTCCTAAACTCTC 58 13685248 13685266 GACTATCCGCTTTGGAACC 58 NA Drosophila melanogaster 61 CG4866 FBgn0034232 FBtr0300602,FBtr0086940 1 2 2 81 2R 13405924 13406004 CTACACCAAGTATAACAAGTTGTCC 59 13406041 13406061 GAAAGGTTCTGAAGCATCCAG 59 NA Drosophila melanogaster 61 hbs FBgn0029082 FBtr0087414,FBtr0087413 3 2 2 80 2R 10925147 10925292 CCGTGAATGTGCTTTATCCC 59 10925333 10925353 AAATCGATCCCGAGATAAGGA 58 NA Drosophila melanogaster 61 CG10253 FBgn0033983 FBtr0087428 3 1 1 89 2R 10818716 10818735 AAAGTTTCAGGGATTTCCGG 58 10818286 10818667 AGTCCAAAGTCCCTAATGTAGG 59 NA Drosophila melanogaster 61 CG12859 FBgn0033961 FBtr0087440 1 1 1 94 2R 10644171 10644189 CAGAGCTCCAATCCCTACC 59 10644327 10644345 TAGTTGGAGACTCGCATCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17574 FBgn0033777 FBtr0113077,FBtr0113078 1 2 4 115 2R 8739084 8742604 GGATGTGATTGAAGCAATCAG 57 8738989 8739007 CACGGGTCAGAAATACAGC 58 NA Drosophila melanogaster 61 CG8525 FBgn0033735 FBtr0087927 2 1 1 147 2R 8313253 8313324 AAACCCTGCCCTATGATCC 59 8313434 8313453 AGATCTGTCAGCATCAGAGC 59 NA Drosophila melanogaster 61 CG7737 FBgn0033584 FBtr0088105 3 1 1 130 2R 7110515 7112096 GATATTCAGTTACCCGGAATGAG 58 7112186 7112204 ACGAGCACATTCTGAAAGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Rab3 FBgn0005586 FBtr0088257 2 1 1 80 2R 6611866 6612322 CTCCAGATCTGGGACACTG 59 6611804 6611822 GATGAAACCCATCGCTCCT 59 NA Drosophila melanogaster 61 CG12934 FBgn0033541 FBtr0088213 3 1 1 60 2R 6536742 6536760 AGCGATTGGAGTTTGAGGT 59 6536784 6536802 ACCAAATGTCCCTGAGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lectin-46Ca FBgn0040093 FBtr0088476 3 1 1 106 2R 5704974 5705123 AAAGATCAACTGGTTCGGG 57 5705193 5705211 ACGTCACGTAGTGTACCAC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)k10201 FBgn0016970 FBtr0088505 2 1 1 61 2R 5286939 5286957 TTTCTGGAAGAGTGCACCA 59 5286982 5287000 ATGATGCAGTGATCCTTGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Dmn FBgn0021825 FBtr0088641 2 1 1 183 2R 4779485 4779588 ACCGGGAATAGCTTATGACC 59 4779734 4779752 ATCCGTGAAGTCCACACTC 59 NA Drosophila melanogaster 61 CG30376 FBgn0050376 FBtr0088800 2 1 1 60 2R 4151178 4151196 ATACAACTCCTACCGCAGC 59 4151136 4151154 AAAGATCATGTTGTGCCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9b2 FBgn0015039 FBtr0089055 1 1 1 95 2R 3019314 3019396 CGTCAACACAAACTGGTGG 59 3019237 3019256 AAAGTCCTTTACGCAGACCT 59 NA Drosophila melanogaster 61 l(2)NC136 FBgn0033029 FBtr0086062 1 1 1 81 2R 1548364 1548382 TGTTCAAGGCCAATCTGTG 58 1548242 1548321 TTCCAGGAGTGATGTATTGTG 57 NA Drosophila melanogaster 61 CG10395 FBgn0033019 FBtr0086087 2 1 1 139 2R 1238319 1238398 GAAAGAAGGTTCTAAGGATGCA 58 1238498 1238516 TTCTCGTGCGTCTAAGAGG 59 NA Drosophila melanogaster 61 CR42545 FBgn0260718 FBtr0301174 3 1 1 70 2L 21577312 21577330 TATGAACTAGCCGAGGAGC 58 21577260 21577279 AATACATGACCTGAGCTGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0081528,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081527,FBtr0081526,FBtr0081525,FBtr0301459 3 13 13 81 2L 21289505 21289525 TTTATACAGCCCAGTCTTGGT 59 21289387 21289464 GTGTGGTTGGAATCAAGTCTG 59 NA Drosophila melanogaster 61 CG10664 FBgn0032833 FBtr0081300,FBtr0081301 2 2 2 84 2L 19959684 19959762 CATCTTCGTGTACGATGAGC 58 19959808 19959827 GATTTCCAGGTCGATGATGC 59 NA Drosophila melanogaster 61 CG17572 FBgn0032753 FBtr0081173 1 1 1 80 2L 19073670 19073959 AGAATTCGAGAAACTCCTGGT 59 19073610 19073628 CCAGTAGTCTCGTTGCTCC 59 NA Drosophila melanogaster 61 CG15145 FBgn0032649 FBtr0080991 2 1 1 81 2L 17531621 17531711 ATATAGGGAATCCTCGGCG 58 17531558 17531576 GAACAGTTCTAGGGTACGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42682 FBgn0261568 FBtr0302804 1 1 1 82 2L 14842377 14842398 GATTGATGACATGTTCCTAGTG 57 14842441 14842541 TGCACAAGCTAGTATCGAG 57 NA Drosophila melanogaster 61 CG33309 FBgn0053309 FBtr0080674,FBtr0100163 2 2 2 108 2L 14810803 14810882 AAACATGCCGATAATAGCCA 57 14810953 14810971 CTTTCGACCTAGACCATGG 57 NA InUTR Drosophila melanogaster 61 Hsp60D FBgn0032525 FBtr0080517,FBtr0080518 3 2 2 60 2L 13448753 13448771 GAAGGAATCCCACAGTCCC 59 13448711 13448730 CGAAGCGATGGTTATACCCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34164 FBgn0085193 FBtr0112355 1 1 1 80 2L 12056422 12056507 ATGTCAGACAAATATGCGGT 57 12056550 12056568 CAGAATTCTCCTCTTGCGA 57 NA Nonspecific, InUTR Drosophila melanogaster 61 CG18302 FBgn0032266 FBtr0080095 2 1 1 81 2L 10535693 10535777 GACCATTAGTGTTTATTGCCAG 57 10535819 10535837 TTATGTATCAGGCTTCGCC 57 NA Drosophila melanogaster 61 TfIIB FBgn0004915 FBtr0080025 1 1 1 91 2L 10431408 10431483 ATCGACATCGAGACTGGAC 59 10431538 10431556 AAATCATATCGCCAGCCCT 59 NA Drosophila melanogaster 61 obst-B FBgn0027600 FBtr0079934 3 1 1 88 2L 10037270 10038226 AGCAAGCTACAAACACCTC 58 10038278 10038296 AACTTATCGCAGATGCCTG 58 NA Drosophila melanogaster 61 CG5899 FBgn0032157 FBtr0100280,FBtr0079901,FBtr0100279 3 3 3 80 2L 9911768 9912139 CACTTTGACACAATGGCCA 59 9911706 9911724 CTCCCTTAGGTATCGCACG 59 NA Drosophila melanogaster 61 CG7787 FBgn0032020 FBtr0079601 3 1 1 124 2L 8320513 8320531 CACCTACAACCAGGAGGAG 59 8320687 8320707 TCTCGAATGTCATCATGTCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Snx6 FBgn0032005 FBtr0079631 2 1 1 80 2L 8219286 8219369 GGATCAAGAATCTGGAAACCC 58 8219226 8219244 TATCCCGCTGATAGTAGCG 58 NA Drosophila melanogaster 61 CG7191 FBgn0031945 FBtr0079485 1 1 1 94 2L 7771595 7773076 TCCCGGCGATGAATTACTC 59 7773134 7773152 GCTCGAGTTCGTTGTACAC 59 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079378,FBtr0079377,FBtr0079376 3 3 3 105 2L 6801780 6801798 TGTGAGCGTAGAGGTAGGA 59 6801638 6801711 ACTTATAAGCCACACGCGA 59 NA Drosophila melanogaster 61 Rpn11 FBgn0028694 FBtr0079027 1 1 1 100 2L 5058665 5058794 TACAACAAGTCACTGGAGGAC 59 5058585 5058603 ACCTTCTCCTCCAAATGCC 59 NA Drosophila melanogaster 61 CG31778 FBgn0051778 FBtr0077543 2 1 1 90 2L 3704939 3704960 GTCAGCTAAGAATCACCATTGG 59 3704624 3704888 CATGCATCTCGAACAACCG 59 NA Drosophila melanogaster 61 CG34340 FBgn0085369 FBtr0302391 3 1 1 147 2L 3673294 3678223 CCATCCATATACCAGCTACTC 57 3678392 3678410 TACATCCGGATAGTGGGTC 58 NA Drosophila melanogaster 61 sob FBgn0004892 FBtr0077558 2 1 1 62 2L 3578897 3578915 CTTACTCCTGCGACATCTG 57 3578707 3578875 ATCTATGATCCCTCAGATGATCC 58 NA DesignNoJunction Drosophila melanogaster 61 Taf10b FBgn0026324 FBtr0077735 3 1 1 239 2L 2767929 2768069 GAAATTTGTTATCTCAGCTGGC 58 2767711 2767729 ATTGTCCATGACTGCTTGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dpp FBgn0000490 FBtr0077774,FBtr0077773 3 2 5 103 2L 2452403 2455066 TATAAGACTGAGAGTTGCAAGC 58 2455130 2455148 TATATCCTCGGTGCTAGCA 57 NA InUTR Drosophila melanogaster 61 CG14340 FBgn0031302 FBtr0077955 2 1 1 87 2L 1113076 1113094 GGAACTCGACCATAATCGC 58 1113145 1113214 TCGGTAATGAGCTTCTGGG 59 NA Drosophila melanogaster 61 CG4375 FBgn0031295 FBtr0077997 2 1 1 60 2L 1026472 1026491 GAACACAGTGAAGTCGAGGA 59 1026431 1026449 CTCCGTTGGTAGTCTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31975 FBgn0051975 FBtr0302195,FBtr0302196 2 2 2 68 2L 139677 139748 TTTAAAGAGTTCCGGCTGG 57 139627 139645 CGTCATAAAGATTGCGTGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 drongo FBgn0020304 FBtr0302612,FBtr0290075,FBtr0302120 1 3 5 90 2L 849927 849945 AACATGACCATCGGATCCT 58 837335 837356 CCATCGATATGGATTTCACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 aru FBgn0029095 FBtr0078033,FBtr0078031,FBtr0078032 1 3 3 83 2L 862618 862636 TTGTGCTGGTCACCTATCC 59 862489 862575 CATCAAGGATCTCCAAGTATTCG 59 NA Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943 2 1 2 81 2L 1359691 1359772 GAAGATCTTCGTCCCTGCA 59 1359628 1359646 CATATTGGAGGGACAGGCT 58 NA Drosophila melanogaster 61 chinmo FBgn0086758 FBtr0077879,FBtr0077877,FBtr0077880,FBtr0077878 3 4 4 82 2L 1695513 1695531 AATCGGAGCGAAACAATGG 58 1695575 1695657 GGCTCCGTTATCTGTAGACTC 59 NA Drosophila melanogaster 61 CG31665 FBgn0051665 FBtr0089786 2 1 2 113 2L 1855468 1855626 GTGCGAAGATGAGTTCGTG 59 1855702 1855721 TTAAGCACAACCGATGAACC 58 NA Drosophila melanogaster 61 CG7337 FBgn0031374 FBtr0113011,FBtr0110882,FBtr0077811,FBtr0110883,FBtr0113012 3 5 5 81 2L 1937576 1938520 TGGAGAATGTAGGCCATAGAC 59 1938562 1938581 CTTGATCCATCCAAGTTGGC 59 NA Drosophila melanogaster 61 Got2 FBgn0001125 FBtr0077868,FBtr0100359,FBtr0077867 3 3 3 96 2L 1985515 1985533 TACCGCTACTACGACAAGG 58 1985368 1985386 CGTGCAGAAGAACAATGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG4270 FBgn0031407 FBtr0077755,FBtr0077754 3 2 2 141 2L 2263743 2263821 GGAATGGGCCAATCATCTC 58 2263924 2263944 GCTATTGATTTCCCGATACCA 58 NA Drosophila melanogaster 61 Rab5 FBgn0014010 FBtr0077793,FBtr0077798,FBtr0077796,FBtr0077794,FBtr0077797,FBtr0077795 1 6 6 80 2L 2360677 2360696 CTGCTGTTCATGGAAACCTC 59 2360553 2360638 CTTAGGTAGTTTCTTGGCAATGG 59 NA Drosophila melanogaster 61 oaf FBgn0011818 FBtr0077777,FBtr0077779,FBtr0077778,FBtr0077780 3 4 4 81 2L 2495422 2495442 CTGATAACGCTGGAGTTTCAG 59 2495483 2495585 TGAGGATTTGAACCTCATTGC 59 NA Drosophila melanogaster 61 colt FBgn0019830 FBtr0077734,FBtr0077732,FBtr0077733,FBtr0077731 1 4 4 60 2L 2769206 2769224 CTACCCGCAAATCTTCGTG 59 2769164 2769182 TGCCATTATCAGGGTGGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 1 3 7 116 2L 2961989 2962284 TATCACTGATGAACATGCTGC 58 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0290238 2 3 7 117 2L 2961988 2962284 ATATCACTGATGAACATGCTGC 59 2962661 2962679 GAATTCTTCGGAGTGGTGC 58 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 1 3 3 91 2L 3017841 3017862 CGGATTATTTATACCACCTGGA 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 3 5 6 82 2L 3071761 3080665 TTCATGTCCAAAGAGCTGG 57 3071697 3071715 GTCTTCTCTAGCGTTCCCT 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0110903,FBtr0077663,FBtr0077662 3 3 6 128 2L 3098023 3098041 GCAATCTGAGCATATCGCC 59 3094367 3097934 AACGTTTATGTATGGATGTGGG 58 NA Drosophila melanogaster 61 Pdsw FBgn0021967 FBtr0077520,FBtr0077521 2 2 2 165 2L 3466409 3466797 GTTCCGTGAGAGCATTGTG 59 3466926 3466944 GACAATCTCGTTGTCGACC 58 NA Drosophila melanogaster 61 CG3238 FBgn0031540 FBtr0077569 1 1 1 88 2L 3468950 3468968 GGACGGACAGTTCTTTGAG 58 3468828 3468846 ACAGGATGAGCTGTATGCC 59 NA DesignNoJunction Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 3 5 6 92 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307621 4307640 TGATGTAGCACTGAACAACG 58 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0079012,FBtr0079015,FBtr0100260,FBtr0079014,FBtr0079013 1 5 8 92 2L 5069212 5070108 CGCGTAAGACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 CG14023 FBgn0031698 FBtr0113022,FBtr0079081 1 2 2 81 2L 5324771 5324789 CAATTCGAGGGCGATTCTG 59 5324646 5324731 GTGTCTCGTTTACATTATCCTTGG 59 NA Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 2 1 1 95 2L 6264417 6264435 TTGATTCTCCTCGCCACTC 59 6264283 6264302 AGGAACGATCTTGGAGAAGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13983 FBgn0031792 FBtr0079285 3 1 1 96 2L 6264419 6264437 TCTTGATTCTCCTCGCCAC 59 6264284 6264302 GGAACGATCTTGGAGAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG9527 FBgn0031813 FBtr0114603,FBtr0089948 2 2 2 80 2L 6445909 6445931 GAAGGATATGGACACAATTCTGC 59 6445787 6445872 TTAAGTAGATTGAGCGGATCCA 59 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0113411 2 1 2 123 2L 6494991 6495009 TGAGGACGAACTGGATTCG 59 6495094 6496066 GCTACGGAGTCTATTCTGGAG 59 NA Drosophila melanogaster 61 homer FBgn0025777 FBtr0110778 3 1 3 144 2L 6720833 6721121 TGAGTGAGGTGAATGAGGC 59 6720707 6720725 TGATGAAGCTCTTGGAGCA 59 NA Drosophila melanogaster 61 CG11321 FBgn0031857 FBtr0301972,FBtr0079386,FBtr0290295 1 3 3 80 2L 6770387 6770405 CATCGAATTCTCCAGCCAG 58 6770261 6770346 AGTTTGTTATCTGGTGTCTTGG 58 NA Drosophila melanogaster 61 CG4495 FBgn0031893 FBtr0113028 2 1 2 82 2L 7182890 7183517 CGAGAGGAAGATAATTGAGTATGAG 58 7183557 7183575 GTATGGTGGCAAAGTAGCG 59 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079574 1 1 9 97 2L 8103496 8105703 CAAGATGGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0079629,FBtr0301338 3 2 9 92 2L 8226594 8227677 CTTTATTGAAGACGGCAAACC 58 8226522 8226540 CAATCCAGGGTGAAGTTGG 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 2 3 9 92 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226522 8226540 CAATCCAGGGTGAAGTTGG 58 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0079628,FBtr0079626 3 3 9 120 2L 8226594 8227659 CATTGATAAAGACGGCAAACC 58 8226494 8226512 TACTGATTCAACGTAGGCG 57 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273381 1 1 4 80 2L 8244495 8244981 TGTCCGGAGAAGGTAAACC 59 8244433 8244453 GTTTAGGCGACCCAAATACTG 59 NA Drosophila melanogaster 61 CG8086 FBgn0032010 FBtr0273380,FBtr0273381 3 2 4 92 2L 8250677 8252241 CTTCCAGATACCAGCTCCT 58 8250603 8250621 TGTTCATGGTGCTTGATGC 59 NA Drosophila melanogaster 61 CG13384 FBgn0032036 FBtr0079655 2 1 6 91 2L 8384885 8386225 ACCTTCAACAGATTCCCGAG 59 8386279 8386297 CTCGTAGTCAGAGGCATCG 59 NA Drosophila melanogaster 61 CG17834 FBgn0028394 FBtr0079686,FBtr0079689,FBtr0079687,FBtr0079688 3 4 4 130 2L 8536951 8536969 TCATTGGACGCATACAACC 58 8537063 8537240 GATCTTGGCGCTCATTAGG 58 NA Drosophila melanogaster 61 Hnf4 FBgn0004914 FBtr0079748 2 1 4 137 2L 8690245 8691024 ATCCAGTGACGAATCGGAG 59 8690126 8690144 CTACTGTTGCTCAGTCCCA 59 NA Drosophila melanogaster 61 CG9510 FBgn0032076 FBtr0299780,FBtr0100481 1 2 2 80 2L 8940304 8940322 AGACGATTCAGGTCAAGCA 59 8940185 8940260 CCAGATAGTAGGCCCAGTC 58 NA Nonspecific Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 3 4 5 90 2L 9272526 9272544 GGGACGCATTAAAGAAGCA 58 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 3 2 3 98 2L 9553518 9553597 ATGGACTCAAGTACGAGGG 58 9553438 9553456 TCTTGTACTTGCCCTCCTC 58 NA Drosophila melanogaster 61 jp FBgn0032129 FBtr0079861,FBtr0079860 2 2 3 90 2L 9553927 9554008 TTTCTGATGAACCTCAAGATGC 59 9553858 9553876 TGGTGGATCTTATGCTGCC 59 NA Drosophila melanogaster 61 CG13124 FBgn0032156 FBtr0300866,FBtr0300867,FBtr0300869,FBtr0079902,FBtr0300868,FBtr0079903 2 6 9 91 2L 9905195 9905213 ACAAGCTGAACGTCAATGC 59 9905037 9905141 AAGTATTAGCGACGAACGGT 59 NA Drosophila melanogaster 61 CG13125 FBgn0032163 FBtr0079898 3 1 2 106 2L 9924152 9924302 GGTAGAAGGCATCGAACGA 59 9924064 9924083 TCACATAGAGGGACAATGGG 58 NA Drosophila melanogaster 61 CG5850 FBgn0032172 FBtr0110943,FBtr0079890 2 2 2 98 2L 9962389 9962407 GTGCTACTCAACGTACTGG 58 9962051 9962328 GAGGAAATTCTGAAGCAGGG 58 NA Drosophila melanogaster 61 CG13131 FBgn0032175 FBtr0273335,FBtr0079971 2 2 2 81 2L 10013572 10013644 GCGAAGGAAAGATCACATCC 59 10013510 10013530 CTAATGCATCATCCTTTGCCA 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 2 2 4 89 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264881 10264956 ATTGAATTAACGACGCGCT 58 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 1 3 3 80 2L 10275742 10275762 TTTCCTAGCATATCGCAACTC 58 10275615 10275700 TGCTGATATAAGACGCCGA 58 NA Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 3 2 2 96 2L 10343339 10343416 GCGAGGAAATAATACTACCGTC 58 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 Nos FBgn0011676 FBtr0080188,FBtr0100492,FBtr0100484,FBtr0100491,FBtr0100488,FBtr0100490,FBtr0100493,FBtr0100489,FBtr0100486 1 9 10 92 2L 10826075 10830607 GTCGCGAGATTCTTTCCTG 58 10826001 10826019 TCAGATCGGATTTCCTGGC 59 NA Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 3 3 3 168 2L 10976155 10976262 GACTTGTGAACAGGCTCCT 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0301840 2 1 4 80 2L 11142998 11143019 GGACTATATCGTGGTTTCTGTG 58 11142406 11142957 GCAAATGTCGTACGTTCCA 58 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 3 4 4 104 2L 11258903 11258988 GGAGAATACATTCGGCATGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0300472,FBtr0080203 3 4 4 103 2L 11258904 11258989 GAGAATACATTCGGCATGGG 58 11259055 11259073 AGGTTGTCCAGACTGTGTC 59 NA Drosophila melanogaster 61 CG4988 FBgn0032372 FBtr0080254 3 1 1 60 2L 11695181 11695201 CAGTAAACCTGACTAGGAACG 58 11695309 11695327 AATCCCAAGAATCCACCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG17010 FBgn0032424 FBtr0080354 1 1 1 99 2L 12356552 12356570 GATGTGGTTGTCTTCGGGA 59 12356686 12356704 AGGTCTCCATGTACGTTCC 58 NA DesignNoJunction Drosophila melanogaster 61 SC35 FBgn0040286 FBtr0089899,FBtr0089898 3 2 2 141 2L 12433690 12434559 GGTCGACAATCTCACATATCG 58 12432714 12433589 GTCATAGAAGCGAACAAATGC 58 NA InUTR Drosophila melanogaster 61 pdm2 FBgn0004394 FBtr0080393 1 1 2 108 2L 12678847 12678866 AACGAGCAACACAAATACAC 57 12678937 12680790 CATGTGCCGCATAAATGTG 58 NA Nonspecific Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981,FBtr0080491 3 3 3 82 2L 13171658 13171751 AATACTCAGTCGGTCAAATCG 58 13171596 13171614 TTTAGCTCCAGCTTGATGC 58 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 2 3 3 84 2L 13897288 13897306 CAAGAGATGTGCGAACTCC 58 13897353 13897436 TTTGCGCCATTCCATATGAG 59 NA Drosophila melanogaster 61 cenG1A FBgn0028509 FBtr0080548,FBtr0080546,FBtr0080547 3 3 3 84 2L 13897287 13897305 GCAAGAGATGTGCGAACTC 59 13897353 13897435 TTGCGCCATTCCATATGAG 58 NA Drosophila melanogaster 61 smi35A FBgn0016930 FBtr0100448,FBtr0100447,FBtr0089288,FBtr0089290,FBtr0089289 1 5 5 80 2L 14195780 14195801 TAATGTCATACACATGCTCGAC 58 14189222 14195741 TACAGGTTCAAGCTCATTAGC 58 NA Drosophila melanogaster 61 wb FBgn0261563 FBtr0302732,FBtr0302734,FBtr0302731,FBtr0302733,FBtr0302735 2 5 5 80 2L 14323471 14323547 CAGAAGCGATCGATGTTTCC 59 14323590 14323608 TACTCAAACCGTAGGAGGC 58 NA Drosophila melanogaster 61 osp FBgn0003016 FBtr0301496,FBtr0114465 1 2 4 96 2L 14639762 14688476 AATGCAATAGGCGAACCTC 58 14636101 14636119 CTAAAGTCCCAATCTGGCG 58 NA Drosophila melanogaster 61 CG15270 FBgn0028879 FBtr0080703 2 1 2 85 2L 15093613 15093631 CGATCCCTGAGATACCACC 59 15093680 15094693 GCTATTTCCGAGTTCGCTC 58 NA Drosophila melanogaster 61 CG4587 FBgn0028863 FBtr0112943 1 1 3 106 2L 15650400 15650509 GAAGTGGATGTCGGTTCGA 59 15650312 15650330 GATGCTGCGATCCAAAGTG 59 NA Drosophila melanogaster 61 Gli FBgn0001987 FBtr0080765,FBtr0080769,FBtr0080768,FBtr0080767 3 4 5 83 2L 15760332 15760410 GGATTACAGAACCTACACGT 57 15760268 15760286 TTTCTGCCTGGATAGTTGG 57 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090004 2 1 4 90 2L 16181895 16182782 GAGTACAACTCTTTAAGGGCA 57 16182893 16182913 TCATAGACCAGATAGGTTCCG 58 NA Drosophila melanogaster 61 Idgf3 FBgn0020414 FBtr0080864,FBtr0080862,FBtr0080863 1 3 3 90 2L 16451849 16451867 ATCAAGGATTTGAGTGCCG 58 16451920 16452205 CATCATAGTACCAGCTGGAG 57 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878,FBtr0100400,FBtr0080876,FBtr0080875,FBtr0080877,FBtr0080879,FBtr0100399 2 7 7 111 2L 16467744 16468060 CTATTCCGAATCCCTGGCT 59 16467651 16467669 CTTGTAGTATGCCGTCGGT 59 NA Drosophila melanogaster 61 dac FBgn0005677 FBtr0080878 2 1 7 82 2L 16475403 16481534 CACCAGAAAGTTCCAGACC 58 16475339 16475357 ATGCTGCGATAGATGAGTG 57 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 2 2 2 80 2L 17383511 17383529 AGCTGAAGGACTTTCCCAG 59 17374728 17383472 CAAATCTATTCCGGGAAAGATCTG 59 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 3 5 5 81 2L 17442579 17442666 GGATACGCCATATCGTCCT 58 17442516 17442536 GTTGATCTCCAGTGTACAGAC 58 NA Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081005,FBtr0301383,FBtr0081006 2 4 5 107 2L 17439291 17441812 CAATGGACTCAGATCCAGC 58 17439202 17439220 GGTCATTCTGCAATTGCTG 57 NA Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081020,FBtr0081019,FBtr0081017,FBtr0081015 2 4 12 90 2L 17717898 17717917 TTCAATCCCAACGATCTGGA 59 17714481 17717845 ACTTGTATGTCTCGCGGTC 59 NA Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0110886 3 1 2 90 2L 17810925 17815581 CAATGAGTCGACGAATATTCGA 58 17810856 17810874 CACGTAAATGACACCGGTG 59 NA Drosophila melanogaster 61 kel FBgn0001301 FBtr0081043,FBtr0081042 3 2 2 81 2L 18133014 18133032 TATGATGTTCCGAGAGCCG 59 18132598 18132971 CACATCGATTTCCATTCTGCA 59 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 2 2 4 176 2L 18475268 18475345 GAAAGATGAGGTACCATTGCTG 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 RpL30 FBgn0086710 FBtr0302491,FBtr0081181 3 2 2 87 2L 19009005 19009023 CAAGCAGACCTTGAAGACC 58 19008531 19008954 GATCTCGGACTTCCTCAGG 59 NA Drosophila melanogaster 61 CG10237 FBgn0032783 FBtr0081207,FBtr0081209,FBtr0081208 3 3 3 256 2L 19436954 19437040 CGTGATCTGATTAAGCGGT 57 19436540 19436558 ATCTGTGTTTCTGGCTCCA 59 NA DesignRelaxed Drosophila melanogaster 61 CdGAPr FBgn0032821 FBtr0081318 1 1 3 81 2L 19779450 19779468 TTTCAGCTACCAGGGAACC 59 19779321 19779406 GTTGTTGGTACTGTGCACAG 59 NA Drosophila melanogaster 61 sick FBgn0260966 FBtr0301719 1 1 4 80 2L 19857772 19857790 GTTATCGAGGCGGTTACCA 59 19857832 19886955 GACGTTGTCAAACATTTGCTG 59 NA Drosophila melanogaster 61 cad FBgn0000251 FBtr0081413,FBtr0081412 2 2 2 129 2L 20771806 20771827 CAACAATAACAATTCGGTGAGC 58 20781806 20781824 GTACTTATCCTTGGTGCGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 3 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826077 20826641 CACTTGTCATTGTCGATGGT 58 NA Drosophila melanogaster 61 clumsy FBgn0026255 FBtr0110895 3 1 2 80 2L 21206666 21206686 TCACTCACTTTCTTCTGATCG 57 21206728 21206818 ATGTGAAGATGCTACCCAC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 CG1416 FBgn0032961 FBtr0085903,FBtr0085904,FBtr0085905 3 3 3 92 2L 21758997 21759017 TTTACAACGCTCTCACAAAGC 59 21759068 21759241 AAAGAATAAATTCTCCACCGCG 59 NA Drosophila melanogaster 61 CG17494 FBgn0040011 FBtr0111253,FBtr0111252,FBtr0302387 2 3 3 110 2L 22473764 22473782 AGCATGATCACTGAAGACC 57 22473854 22476862 CTTTACAATCTCGTTTCGCAG 58 NA Drosophila melanogaster 61 lt FBgn0002566 FBtr0111123,FBtr0111125,FBtr0111124 2 3 3 80 2L 22818638 22820175 CATTGTGGATCCAATCTCGA 57 22820218 22820236 ACAACCAATTGCTTTGCAG 57 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 3 3 5 171 2R 614798 614818 TCACAAATTCTTGACGTCAGC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 1 6 6 104 2R 1008344 1008362 GTTTAGAGGACTGCGAGGG 59 1005298 1008277 AAGGGTTCGGGATCTAATCC 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 2 3 6 103 2R 2039492 2039583 GACTTGATGTTACCGAGGAC 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 Pld FBgn0033075 FBtr0114492,FBtr0085996,FBtr0085998,FBtr0085995,FBtr0085999,FBtr0085997 1 6 6 82 2R 2137516 2137856 CCCAATCTGTACACAATCGAG 58 2137900 2137918 TGCAACGAGTTAAAGTGCT 58 NA Drosophila melanogaster 61 jing FBgn0086655 FBtr0114364,FBtr0114363,FBtr0301636,FBtr0114365 3 4 5 83 2R 2503182 2503200 GGGAGCTGGAAGCTATCTC 59 2503244 2503460 GAATTGGAAGCCATAGTTTCGT 59 NA Drosophila melanogaster 61 Vha16 FBgn0004145 FBtr0086152,FBtr0086150,FBtr0086153,FBtr0086151 2 4 4 78 2R 2519555 2519573 TCTTCGGAGTTATGGGAGC 58 2515390 2515408 GTACCAGACTTAGCAGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0299800,FBtr0086116 1 2 3 139 2R 2556822 2556840 TATCCTGTTGCAGTGGAGG 59 2557000 2557018 GTACATGTCCTGCATGGAG 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Eb1 FBgn0027066 FBtr0086127,FBtr0086129,FBtr0086130 3 3 5 123 2R 2641933 2642214 AGTGAAGCCCACAGTATCC 59 2642301 2642319 GTTGACCGAATTGCTCACG 59 NA Drosophila melanogaster 61 coro FBgn0033109 FBtr0086208,FBtr0086209,FBtr0086207 3 3 3 87 2R 2752069 2752151 GGTATTTCGAGGTAACGCC 58 2752000 2752018 ATCAGACCAATACCACGCT 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111081,FBtr0111069 2 2 59 80 2R 3219878 3229620 TGATCGTGAATGTACCTCCC 59 3219817 3219835 ATTCAACCTTGGCATCGGA 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111076 3 1 59 87 2R 3248144 3249230 CATCACAGAACCAGTTGGC 59 3248075 3248094 TTGACTAGAGCCTTCGTCTC 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111092,FBtr0111091 2 2 59 82 2R 3247642 3247660 ATTCTCCGGGTGTATCTGG 58 3236472 3247598 TTGTACCATCTAAAGAAGGGC 57 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089743 2 2 3 112 2R 3393995 3394013 TGGACAAGATCTTGCAACG 58 3394086 3394172 CAGATCGGTGTATCGAATACAC 58 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112581 3 1 4 90 2R 3738545 3739778 AAAGAGGGCTGACATTAAGCT 59 3738475 3738495 ATAGCAGACGACATCCTTCAG 59 NA Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 3 2 2 60 2R 4126193 4126211 GTGATGCCGTTGACAACAG 59 4126233 4126253 TACTTGCTATCCACGTACTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 babo FBgn0011300 FBtr0088659 1 1 3 80 2R 4842346 4843225 TTCAGCTACAGTTGCATGG 58 4843267 4843287 GAACCTTTCGTTACTGGTGAG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 2 4 12 80 2R 5003946 5004692 CCAAGTACAAGGAATGTGAGC 59 5004732 5004752 AGATGTTCAGAAACGACAGGA 59 NA Drosophila melanogaster 61 CG18659 FBgn0027561 FBtr0302498,FBtr0088626 3 2 4 89 2R 5013708 5014931 AGGACAAGACTAATCCGGC 59 5013523 5013543 TCTTGAATCCCTTATAGGCGG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 1 3 10 80 2R 5155477 5155887 AGATATCTGCAGAAGGCGA 58 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0302604,FBtr0112897,FBtr0301511 3 3 10 81 2R 5155478 5155888 GAGATATCTGCAGAAGGCG 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 CG1868 FBgn0033427 FBtr0088543,FBtr0088542 1 2 2 80 2R 5471134 5471152 TGCTAAAGAACCAACCCAG 57 5471017 5471092 CAGGATCTGTAAGGATTTCCC 57 NA Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 3 2 2 125 2R 5592559 5592654 GGTCTTTAAAGATCACATACGACC 59 5592738 5592756 GCATAGCGTAGACTCTCCG 59 NA Drosophila melanogaster 61 CG1625 FBgn0033447 FBtr0289980 1 1 2 80 2R 5714552 5714915 CGATCGAGGGTACTAAGAGTG 59 5714492 5714510 AACGACTGGTGTACTTGGG 59 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 1 2 4 80 2R 5782181 5782257 ATATCACCGAAGAGAACAGACC 59 5782295 5782316 GCTTGTCGTCATTAGAACTAGG 59 NA Drosophila melanogaster 61 CG30007 FBgn0050007 FBtr0300921,FBtr0088381 1 2 4 80 2R 5782181 5782257 ATATCACCGAAGAGAACAGACC 59 5782295 5782316 GCTTGTCGTCATTAGAACTAGG 59 NA Drosophila melanogaster 61 magu FBgn0033478 FBtr0088400,FBtr0088399,FBtr0088401,FBtr0088402 2 4 5 83 2R 5948803 5948823 GTAACCAAGGATGCCAATCTC 59 5948867 5949139 ATTTACGACAGCACTACGGT 59 NA Drosophila melanogaster 61 CG2269 FBgn0033484 FBtr0088409 1 1 3 94 2R 5978290 5979265 ACGACTGGGATGAAGATGG 59 5979322 5979341 GTCGCGTTCTAAGTACTTGC 59 NA Drosophila melanogaster 61 14-3-3zeta FBgn0004907 FBtr0100183,FBtr0088412,FBtr0088418,FBtr0088417,FBtr0088413,FBtr0100182,FBtr0088415,FBtr0088414 3 8 10 89 2R 5993943 5994975 CAATTGGCTAAACAGGCGT 59 5995028 5995046 CTGCATGATGAGTGTCGAG 58 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 3 9 9 83 2R 6348879 6348900 AACAAGAAGGATTTGTTCGAGG 59 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089364,FBtr0089354 2 2 26 93 2R 6419605 6419623 ATATGCAACATGGCAGCAC 59 6378543 6419548 AGTCCAGTAGCCATCTTGG 58 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089355 1 1 26 80 2R 6389907 6389926 GTCCGTAATTGGCTAATGCT 58 6389548 6389867 GGACTGAGTTAGTTTGTCTGAG 58 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0088243,FBtr0088242 2 2 4 81 2R 6731012 6735971 CCATTGTACTCAAGGCGGA 59 6730949 6730967 AGACCCAAATCCTCGTCAG 59 NA Drosophila melanogaster 61 E(Pc) FBgn0000581 FBtr0088139,FBtr0088140 3 2 2 92 2R 7344227 7344315 TGTTTACCTACCGACTCGA 57 7344371 7344389 TTAGCATCCGAACAAGCAC 58 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088040 1 1 2 147 2R 7851925 7851943 CATCACATTCAACAGCAGC 57 7852054 7854248 CAAGCTCCGAATCTATGCC 58 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089669,FBtr0089671,FBtr0089668 3 4 4 80 2R 8191682 8191701 TACAATAAAGCAGCATGCCG 59 8191551 8191641 TCCCTTAGATCGCTTATCTGC 59 NA Drosophila melanogaster 61 SIP2 FBgn0061197 FBtr0089670,FBtr0089668 1 2 4 90 2R 8191120 8191138 ATTGTTGCGAGCCAATCAG 59 8190981 8191072 CCCTAATGTTATTGAATATAGGGCG 59 NA Drosophila melanogaster 61 Sin3A FBgn0022764 FBtr0087887,FBtr0087890 3 2 4 97 2R 8464495 8466648 GAAGATACTGCCGAGTTGC 58 8464416 8464434 TCAAGCAGCTTTGATCTCC 57 NA Drosophila melanogaster 61 CG8776 FBgn0033764 FBtr0087868,FBtr0302150,FBtr0302151,FBtr0087870,FBtr0087867,FBtr0087869 2 6 6 154 2R 8548084 8548102 GAACAAGACCTACAGCTGC 58 8547877 8547966 GCTTGTTCTCACTGCTCAC 59 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087786,FBtr0100672,FBtr0087787 3 3 3 68 2R 8810274 8810292 ATGCTCTGCAAACGTTCTG 59 8810391 8810410 GATACTTGAACCAACGGCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13319 FBgn0033781 FBtr0087788,FBtr0300890 1 2 2 90 2R 8811822 8811840 CATGCAAGACCATCTGGAG 58 8811964 8811982 CCGAAATAGACGTTGACCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17049 FBgn0033832 FBtr0087718 2 1 1 71 2R 9280195 9280214 CTATTTATCGGAGGTTCGGG 57 9280057 9280075 CGTTTCTTCCTCTCATGGC 58 NA DesignNoJunction Drosophila melanogaster 61 drk FBgn0004638 FBtr0087693,FBtr0087697,FBtr0087698,FBtr0087696,FBtr0087695,FBtr0087694 1 6 6 80 2R 9385034 9385133 TCTCCTTATCAGTCAAATGCC 57 9384974 9384992 CCCAGAGGAAGAATTTGCT 57 NA Drosophila melanogaster 61 CG6145 FBgn0033853 FBtr0087687,FBtr0087685,FBtr0300193,FBtr0300192,FBtr0087686 3 5 5 150 2R 9426599 9426617 GTCAGCCGTCTTAGAGGAC 59 9426351 9426485 GCGGCCATCTTTAAAGGTC 59 NA Drosophila melanogaster 61 synaptogyrin FBgn0033876 FBtr0087645 3 1 1 77 2R 9731074 9731092 ACGACAACGACCAGTACAG 59 9730812 9730830 CCATTCCGGATTGTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 shot FBgn0013733 FBtr0087617,FBtr0087620,FBtr0087621,FBtr0087618,FBtr0087619,FBtr0087616,FBtr0273226,FBtr0273223,FBtr0301964 3 9 15 137 2R 9759593 9759611 TTGATCGAGGACCACAAGG 59 9758834 9759492 TCCCTTAAAGACTGGCGTC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100452 1 1 3 82 2R 9841883 9841901 AATTTGAAGGGCGTCAAGC 59 9841947 9842436 AGGAAGAGGAATTCCCGTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 RN-tre FBgn0020620 FBtr0087603,FBtr0087605,FBtr0302380,FBtr0087604 3 4 4 87 2R 9877116 9877197 ACAGACAAATATGGCTTCTTGC 59 9877050 9877070 GCTCCATTTCAATCTTGTTGC 58 NA DesignRelaxed Drosophila melanogaster 61 mam FBgn0002643 FBtr0087597,FBtr0087596 3 2 3 104 2R 9928271 9943272 CCCATGGTATTCAGGTGTC 57 9943340 9943358 GCTGCTGACTGAAGAAGAC 58 NA Drosophila melanogaster 61 Sox15 FBgn0005613 FBtr0087576 3 1 1 90 2R 10098815 10098837 CTCATATGATCACGAACATCCAC 59 10091512 10091530 GTGACTGTACTCCGGAGTG 59 NA DesignNoJunction Drosophila melanogaster 61 opa1-like FBgn0261276 FBtr0087573 3 1 2 81 2R 10121837 10122207 ATCGAAGTTGCCAAAGATGAC 59 10121776 10121796 ACTTCTTACGACTCTCATCGG 59 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 2 4 4 84 2R 10126045 10126142 GTTCACAGGGATCTAAAGCC 58 10125980 10125998 TGTTGCTAAACCCGAAGTC 58 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0302109,FBtr0301513,FBtr0302294 3 4 4 236 2R 10758527 10758546 CATCGCAGTTGTTACGTGAG 59 10757703 10757721 CATCGTCGCGGTAATTCTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG34123 FBgn0083959 FBtr0114580,FBtr0114579,FBtr0110833,FBtr0113485 1 4 6 80 2R 11152373 11152395 AACGACTATATGATTCTGGAGGG 59 11152254 11152335 TACACCAATCTCGAATCCCTG 59 NA Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0301313 1 1 7 111 2R 11651330 11651445 CAAGGAGATCACCTCAGGAC 59 11651238 11651256 GAATCCAATGTCCTGCAGC 59 NA Drosophila melanogaster 61 Dg FBgn0034072 FBtr0087258,FBtr0087257,FBtr0087256 3 3 3 87 2R 11971383 11971469 CCCTTCAGTATTTGTCATCATACTG 59 11971320 11971340 ACTTATGTGTAGGCTCTTCGG 59 NA Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 2 2 2 60 2R 12034470 12034491 AGACGATGACATCATAATGCTG 58 12034373 12034449 TCGCCAAACTTCATAGCCA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8446 FBgn0034089 FBtr0114473 2 1 3 111 2R 12083979 12083998 GTTCGACCAACACTAGTTGC 59 12084072 12086002 CAGTGCCGGAAATCTTCTG 58 NA Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0087079 3 1 4 80 2R 12646326 12646767 GAGAAGTTACGCTATCGCCT 59 12646265 12646283 CGTATCGAACAGCATGGAC 58 NA Drosophila melanogaster 61 Psi FBgn0014870 FBtr0087073,FBtr0087074,FBtr0087072 1 3 3 116 2R 12753591 12753668 AACGTTATGCAACGAAATGG 57 12753494 12753512 ACCTTGAGCGTGATTTACG 58 NA Drosophila melanogaster 61 CG30461 FBgn0050461 FBtr0100249,FBtr0100251,FBtr0100250,FBtr0100252 2 4 4 60 2R 12883861 12883879 GAATGACGGATGCCAAGTG 59 12883765 12883784 CAGTTGACAATGTCCATCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 1 3 4 84 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311215 13311233 CAAGCCATTGCTTAGGTCG 59 NA Drosophila melanogaster 61 CG18431 FBgn0061355 FBtr0302720,FBtr0100358 3 2 2 60 2R 13390421 13390440 AAATCGTACTCTTCTGCCTG 57 13390463 13393156 GTCGTAATGCGTTGACCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0273447,FBtr0086948 2 2 8 81 2R 13408429 13411602 CTCGAATCTAACCGGTCCT 58 13408366 13408385 GTATTCAACGGCATTCAGGA 58 NA Drosophila melanogaster 61 Rab4 FBgn0016701 FBtr0086830,FBtr0086829,FBtr0086831 1 3 3 80 2R 13461764 13461847 AAGAGAACGAGCTTATCTTCC 57 13461887 13461907 TCTTTGAGCACTTGAGAAAGG 58 NA Drosophila melanogaster 61 eIF3-S8 FBgn0034258 FBtr0086836 3 1 1 157 2R 13553641 13553659 AACTTCAACAAAGCCAGCG 59 13553839 13553860 CTCAGGGTATTGGGAATATCCT 58 NA DesignNoJunction Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0301182,FBtr0301183 1 2 4 85 2R 13619771 13619837 GAACTATTGGTCGCTTGGT 57 13619886 13619904 AAGCTCATCACGAACAGTG 58 NA Drosophila melanogaster 61 lolal FBgn0022238 FBtr0086777,FBtr0086779,FBtr0086776,FBtr0300483,FBtr0086778 1 5 5 80 2R 14042986 14043404 TCACAGATGTAACACTCGC 57 14042924 14042942 TAAAGTAGGGACTGCAAGC 57 NA Drosophila melanogaster 61 CG15067 FBgn0034331 FBtr0300844,FBtr0086728 3 2 2 102 2R 14273055 14273073 AAGAGCCTGACGTTATTGG 57 14272916 14272935 GATCATGGGAGCAGTTTACG 58 NA DesignNoJunction Drosophila melanogaster 61 Atg7 FBgn0034366 FBtr0086712 3 1 2 89 2R 14512329 14512347 AAACGCTCCATTACTGGAC 57 14512202 14512277 CTTTGCCATTCTGTTGTAGG 57 NA Drosophila melanogaster 61 CG15118 FBgn0034418 FBtr0086590,FBtr0086589,FBtr0113096,FBtr0086591 3 4 5 95 2R 15024321 15024464 ATCGACCAGAACGATAAGGAG 59 15024246 15024264 AAGGCATTTAACGCATGGC 59 NA Drosophila melanogaster 61 CG10737 FBgn0034420 FBtr0290313,FBtr0290317,FBtr0100282 2 3 12 81 2R 15064177 15064196 GATTAGTCACAAGCAGTGCC 59 15064235 15065333 GAGTTTAGTTAGTTCCATGGAGAG 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0301506,FBtr0301503 1 2 19 85 2R 15359174 15359192 GTTTGAGGAGGACGAACTC 57 15359240 15360332 CTAGAGCTTCCGTCTTACCT 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0086460,FBtr0100392,FBtr0086457 2 14 19 105 2R 15365202 15366258 TCACTCTGGTCAAACCAGAG 59 15366326 15366344 GGAGAAGAAGCTCATGCGA 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0086453,FBtr0100391,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0086457,FBtr0086454 2 11 19 82 2R 15360675 15360953 GAAACTTTGCGTGTTGGAC 58 15360999 15361017 TTGCTTGGATTAACCGCAC 59 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0301610 3 1 6 80 2R 15434003 15434022 GCAACCCTAACATCTACCGA 59 15433553 15433960 ACAGCGACTTACCATTGGT 59 NA Drosophila melanogaster 61 Obp56g FBgn0034474 FBtr0086343,FBtr0086342 1 2 2 72 2R 15671501 15671520 GGCTACATTCGCATTGACTC 59 15671380 15671398 CGAACTGTCTATGTTGGCT 57 NA DesignNoJunction Drosophila melanogaster 61 mRpL54 FBgn0034579 FBtr0071533 1 1 1 106 2R 16948474 16948492 GATAGGAAACTGGGCACGT 59 16948617 16948637 CGGGTATGACTTTCTTCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 3 6 6 80 2R 16972828 16972846 TTAATGCCATGATGGAGGC 58 16972888 16972968 GTGCACTGAAGTACTTATCGA 57 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 1 3 3 80 2R 17059016 17059036 TAAATGTTACGGACTCACTGC 58 17059077 17059148 TCAAAGTACTGGCAAATGGG 58 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 2 2 3 121 2R 17092793 17092873 CGCCTTCAAACAGTTCAGAG 59 17092957 17092975 CATGAGCATACTCCGACGA 59 NA Drosophila melanogaster 61 CG42672 FBgn0261554 FBtr0302707,FBtr0302701,FBtr0302706,FBtr0302705 1 4 8 139 2R 17196043 17197141 GAGTCCCACAGAACTCGAC 59 17197244 17197262 CTCGCTTGTCTGCTTTGAC 59 NA Drosophila melanogaster 61 MESK2 FBgn0043070 FBtr0089704,FBtr0089707,FBtr0089706,FBtr0089711,FBtr0089710,FBtr0089705,FBtr0089709,FBtr0089703,FBtr0089708 1 9 9 80 2R 17398682 17398702 AGAACTTCTGTGTTTACCACG 58 17398742 17398922 TCGGATAGACGTAATCCTCTG 58 NA Drosophila melanogaster 61 Egfr FBgn0003731 FBtr0071654,FBtr0071653 2 2 2 86 2R 17442488 17442506 ACAACATACGGGAGGTCAC 59 17442554 17442710 CGCGAATGATTTGTAGTTTGG 58 NA Drosophila melanogaster 61 CG30222 FBgn0050222 FBtr0300457,FBtr0300458 2 2 2 187 2R 17471229 17471304 GTTTGTGGCCGAATCACTG 59 17471452 17471473 GTTTGAGGGAGAGGTCATAGAG 59 NA Drosophila melanogaster 61 CG10320 FBgn0034645 FBtr0300680,FBtr0113102,FBtr0071663,FBtr0300679,FBtr0113101 3 5 5 199 2R 17545977 17546054 ATGGCTGAGGAACGAAGTC 59 17546217 17546235 TATCTCCGTGTTCCTCGTG 58 NA DesignRelaxed Drosophila melanogaster 61 LBR FBgn0034657 FBtr0071713,FBtr0071711,FBtr0071712 3 3 3 87 2R 17608759 17608777 GATCGGGATCTGGTTCCTC 59 17608828 17609376 ATAGGCGATGATACCTCGG 58 NA Drosophila melanogaster 61 synj FBgn0034691 FBtr0071757,FBtr0071756 1 2 2 158 2R 17969993 17970011 ATCTTCCGACAGATGTGGA 58 17970133 17970218 AATGGCTTCCTGCTTTGAG 58 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 1 11 11 86 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998367 17998385 GACTGCTGTTTAAGGACGC 59 NA Drosophila melanogaster 61 CG6044 FBgn0034725 FBtr0301242,FBtr0301188,FBtr0113108,FBtr0071823 2 4 4 173 2R 18294822 18294971 ATTATAATGCTGCACACCACG 59 18295106 18295124 CTTTGTTCGGCAGTACCTC 58 NA InUTR Drosophila melanogaster 61 CG13551 FBgn0040660 FBtr0072034,FBtr0072033,FBtr0072035 1 3 3 121 2R 19265690 19270145 ACAAGAAGCAAAGGGAGCA 59 19265587 19265605 CTCGAGGAACTCCTTGTGG 59 NA Nonspecific Drosophila melanogaster 61 eIF2B-delta FBgn0034858 FBtr0302315,FBtr0072014,FBtr0072015,FBtr0072013 3 4 4 157 2R 19275058 19275076 GCTGACCTGAAAGTAGCAG 58 19275256 19275274 TTAGTCTGTACCTGGGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 Phm FBgn0019948 FBtr0072203,FBtr0072202 2 2 2 94 2R 19873906 19874868 AATTCCCAGATCGTATACGCT 59 19873832 19873850 TTGATTGGCGAGTTCTTGC 59 NA Drosophila melanogaster 61 CG3907 FBgn0034958 FBtr0072195,FBtr0072196 1 2 2 80 2R 19908217 19908295 GAAATATCTCTGCACAAGACGA 58 19908158 19908176 ACTTATTGTGGCCACATGG 58 NA Drosophila melanogaster 61 CG13568 FBgn0034965 FBtr0289969,FBtr0289970,FBtr0289968,FBtr0289967 2 4 4 90 2R 19941233 19941322 TTCCTTACAGCTTCTCGGC 59 19941161 19941182 CGATCCTTTGGGTTGAATAGAG 59 NA Drosophila melanogaster 61 CG42568 FBgn0260770 FBtr0301274 2 1 2 60 2R 20046697 20046716 TCACAATGCTAAGGTTGTGC 59 20046597 20046674 TCGTTCGAGAAATTACGCA 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 NKAIN FBgn0085442 FBtr0301850,FBtr0301848,FBtr0301851,FBtr0301847,FBtr0301849 2 5 5 81 2R 20770530 20770606 CTTCCTGCAAGTGATAACGA 58 20770649 20770668 AAAGTTCACTAGGATAGGCG 57 NA Drosophila melanogaster 61 Kaz1-ORFB FBgn0063923 FBtr0072488,FBtr0100851,FBtr0072493,FBtr0072490 3 4 6 91 3L 217697 217715 TACAATCCAATCTGCGGCA 59 217770 217867 ACCTTCCGGATGTTTAGGC 59 NA Nonspecific Drosophila melanogaster 61 trh FBgn0003749 FBtr0072567 1 1 2 115 3L 370607 370626 TCAAATCCTCAGGCTATCGG 59 369665 370215 CAGAACCACCGAATAGTTTGAG 59 NA Drosophila melanogaster 61 Glut1 FBgn0025593 FBtr0112910,FBtr0112911,FBtr0301406,FBtr0072617,FBtr0072616,FBtr0112909 1 6 6 80 3L 982096 982187 CCATAATGGTTGTTATGACGC 57 982229 982247 CCAGACCATAGAGATGCAG 57 NA Drosophila melanogaster 61 CG34022 FBgn0054022 FBtr0100077 3 1 1 81 3L 1206371 1206390 CTCTACTTGATTCACCGCAC 58 1206532 1206550 AATTCCCTCTAGCCGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32333 FBgn0052333 FBtr0072662 2 1 2 82 3L 1290466 1290540 GCTGTTAGGTGCCATTGAG 58 1290584 1290604 CAATCTGGGAGTTTATGCTCG 59 NA Drosophila melanogaster 61 CG7971 FBgn0035253 FBtr0072807,FBtr0072806 2 2 5 86 3L 1656737 1656755 TGAAGTCTGGTATAGCGGC 59 1655700 1656687 CGACTAGAGGTTCGCTACC 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 1 5 5 98 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743973 1743991 TTGAGCAGAACAGGATCCC 59 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302730 3 1 3 100 3L 1803476 1803495 GAAGATCGGCTTCAACATCC 59 1803555 1805018 CATCGTAGACTTGACTGATCTC 58 NA Drosophila melanogaster 61 mu2 FBgn0002872 FBtr0072857 2 1 3 126 3L 1945523 1945660 AAAGTTGCATCAGGGACTG 58 1945360 1945379 AAACGCCTTCAATCTGACAG 58 NA Drosophila melanogaster 61 zormin FBgn0052311 FBtr0110857,FBtr0089864,FBtr0110856 1 3 4 171 3L 2129194 2129212 GGAAAGTACATGGTTCGCG 59 2126658 2129059 TGTACTTGTAGCCTTCGGT 58 NA Drosophila melanogaster 61 CG9018 FBgn0035318 FBtr0072910,FBtr0072909 1 2 2 80 3L 2236098 2236119 GGAAATATCCGAGATTAGCTGC 59 2235962 2236057 GCTTCGTTCACCTGTATGG 58 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0273252 3 1 3 123 3L 3153367 3153385 CTCGATACATGGATTCGCC 58 3153469 3153544 GAAATCGTATTGTTGATGGTGC 58 NA Drosophila melanogaster 61 armi FBgn0041164 FBtr0073126,FBtr0100641 3 2 2 85 3L 3463214 3463235 TAAAGACAGACTTGCCTACAGG 59 3463278 3463365 AAATTTGGAATACTGGCACTCG 59 NA Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 3 2 2 74 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466963 CATATAGTAGACGGCCAGGTG 59 NA DesignRelaxed Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073132,FBtr0073131,FBtr0110920,FBtr0302598 3 4 13 89 3L 3516817 3552793 ATGCTAAAGATGGCGTCAC 58 3552846 3552864 TTAATCTGCCGAAGCTGTG 58 NA Drosophila melanogaster 61 nab FBgn0259986 FBtr0302033,FBtr0302032 1 2 2 87 3L 4154450 4155248 CTTGAATCGGGAAGCTGTC 58 4154381 4154399 TTCCGACAGATCAAATGGC 58 NA Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 2 1 1 158 3L 4292633 4292652 ATAAACTCATGCAGAGCTGC 58 4292860 4292879 GGACGTCTTAATCTTGTCCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG1319 FBgn0035529 FBtr0300775 3 1 1 158 3L 4292634 4292652 TAAACTCATGCAGAGCTGC 58 4292861 4292880 CGGACGTCTTAATCTTGTCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273233 1 1 10 91 3L 5532468 5532486 TACACAAGAAACGCGAAGC 59 5532353 5532413 GGTCTTCACCTCTTCGGAG 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273231,FBtr0077140,FBtr0077139 1 3 10 80 3L 5535644 5535662 ATGAGGGAACCTACACGAG 58 5534464 5535603 TACCGTTATCTGGAGTGTATGG 59 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112712,FBtr0112708 3 2 8 80 3L 5669476 5669495 ATCGCAATGAGTTGATCAGG 58 5669535 5669621 AGTTGGAGAAACTGGAATTGTG 59 NA Drosophila melanogaster 61 CG33993 FBgn0053993 FBtr0301034,FBtr0100046 2 2 2 194 3L 5927082 5927164 ACAAGATAAAGGGCTTCACCA 59 5926908 5926926 TCAGCGAGCCATACATCTC 59 NA Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 1 6 6 89 3L 6584024 6584042 GAATCCTCCCAAACGTGAC 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 ple FBgn0005626 FBtr0076957,FBtr0076956 1 2 2 80 3L 6708857 6708875 AGTTCTCGCAGGAGATTGG 59 6708456 6708814 TGAACCAGTATACCGTGGAC 59 NA Drosophila melanogaster 61 CG42256 FBgn0259141 FBtr0302123,FBtr0302124,FBtr0299551,FBtr0299549,FBtr0299548,FBtr0299550 3 6 9 160 3L 7157973 7158039 TTTGCTACAGACACATGCT 57 7157831 7157851 CGGAATCTTATCGTTGTTCTG 57 NA Drosophila melanogaster 61 akirin FBgn0082598 FBtr0302545,FBtr0076849,FBtr0302543,FBtr0076848,FBtr0302544 2 5 5 131 3L 7365500 7365518 AGAATCAGCTAAGGGAGCG 59 7365612 7365692 TTTACGACAGGTAGCTAGGC 59 NA Drosophila melanogaster 61 CG7546 FBgn0035793 FBtr0076792,FBtr0290026,FBtr0076791,FBtr0290025 1 4 4 80 3L 7509082 7509100 CCTTGGCACATGAGTTTCC 59 7509144 7509227 ACGATTACTCTGCTCTGCC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112697,FBtr0112702,FBtr0302843,FBtr0112698 3 13 15 85 3L 7703370 7703458 GCTTCTCGATAATGACCATAATCC 59 7703308 7703329 TTTGGTTACCATAATGGGAAGC 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112696,FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 3 12 15 95 3L 7699007 7699083 TGAACCAGAGGAGATTGCC 59 7698930 7698949 GATACGACGGCAAAGTACTG 58 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112598,FBtr0112601,FBtr0112602,FBtr0112600 2 4 5 85 3L 8092629 8096005 TCATTAAGGAAGCCCTCTCAC 59 8096051 8096070 TTGCACCGTAATACTGGAGG 59 NA Drosophila melanogaster 61 Ect4 FBgn0085402 FBtr0112601 3 1 5 138 3L 8072732 8086172 GCATTATCAGATGACAGACTTCTC 59 8086269 8086287 AGTTAGGGTGCTTATGGCG 59 NA Drosophila melanogaster 61 CG17352 FBgn0035880 FBtr0076675,FBtr0076676,FBtr0100664,FBtr0076674 3 4 5 183 3L 8347279 8347358 CGTGTTCAACTACTTGAATTGC 58 8347117 8347135 GGGCTTGTGAGAGTACCAG 59 NA Drosophila melanogaster 61 smg FBgn0016070 FBtr0076549,FBtr0290103,FBtr0076550,FBtr0290104,FBtr0076551 1 5 5 81 3L 8986138 8986216 GAACATTAACAAGCCAAGATGG 58 8986078 8986097 GCGGTTGTTAATCCTATCGT 58 NA Drosophila melanogaster 61 fry FBgn0016081 FBtr0301435 1 1 3 119 3L 9660884 9660903 ATATTTGCGTCTTTGGAGGA 57 9658782 9660804 TCCGACTGATCTTGTAAACTC 57 NA Drosophila melanogaster 61 Ard1 FBgn0036064 FBtr0076349,FBtr0076352,FBtr0076351,FBtr0076350,FBtr0076348 2 5 5 60 3L 9966736 9966754 CTGAACCTCTACACCAACG 57 9966778 9966796 CATAGTACTTGGGCTCCAC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 2 1 1 79 3L 10209372 10209392 CAACATGAAGTTCTGTTTCGC 58 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 hay FBgn0001179 FBtr0076253,FBtr0114599 3 2 2 97 3L 10626391 10626415 CCTCCAGAACTTTAAGTTTAACTCC 59 10626526 10626545 GGATAAGCACATTAGCCTCG 58 NA DesignNoJunction Drosophila melanogaster 61 Mnf FBgn0036134 FBtr0300785,FBtr0300783,FBtr0300786,FBtr0300784 1 4 5 125 3L 11109614 11109777 ACCAACTGGTACAATAAGCG 58 11109442 11109460 GGAGTCTGGAACAGATCCT 58 NA Drosophila melanogaster 61 Fuca FBgn0036169 FBtr0100588,FBtr0100587 2 2 2 60 3L 11513424 11513443 CTATTCAATGCCACCAAGTG 57 11513302 11513401 GCACAACATATCTGGCTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 2 4 4 99 3L 11600441 11600547 TGCTACCAGTCAAATCCCA 58 11600360 11600378 CATTGTAGTGTGATCCGCG 59 NA Drosophila melanogaster 61 Pi3K68D FBgn0015278 FBtr0076088,FBtr0301816,FBtr0076087 2 3 4 80 3L 11769480 11769501 TCGTTTACACATTCTTTCACCC 59 11769359 11769441 GCTTCACCTCCTTTATCTTCG 58 NA Drosophila melanogaster 61 CG5946 FBgn0036211 FBtr0076079,FBtr0076078,FBtr0302136 3 3 6 107 3L 11811263 11811281 AAGGACATTCTACTGCGTG 57 11810403 11811192 GCTATACTGCCAACCTTCG 58 NA Drosophila melanogaster 61 rols FBgn0041096 FBtr0076055,FBtr0076053,FBtr0076057 3 3 5 135 3L 12005822 12006041 CCTGTCGGGAGATCATACTC 59 12005706 12005725 GTGATTGCTCACGTTCTTCC 59 NA Drosophila melanogaster 61 Est-6 FBgn0000592 FBtr0076003 3 1 1 88 3L 12183279 12183297 GTCTATGACAATCCAGCCG 58 12183400 12183418 TAGTCGTCACCGTGTACAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG10663 FBgn0036287 FBtr0113167,FBtr0113168,FBtr0075977 3 3 3 81 3L 12468728 12468750 GAGAGTGATGAAGAGCTATACAC 58 12468611 12468689 CTTGGGTAACCTTAACAATGC 57 NA Drosophila melanogaster 61 Pegarn FBgn0036312 FBtr0300560,FBtr0075926,FBtr0075925 3 3 3 90 3L 12788109 12788128 GATTACAAATCCGCCCATCG 59 12788181 12788273 ATTGCGATTGGCACTTCTG 59 NA Drosophila melanogaster 61 CG14117 FBgn0036331 FBtr0302026,FBtr0302025 3 2 2 98 3L 13001942 13001963 CTCGAAAGTTTCGTTACAAGTC 58 13002076 13002094 TGGGTTTCGCTAAATCCAG 57 NA DesignNoJunction Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0114573 1 2 3 109 3L 14058246 14058721 AAGGAGTCATCGGAAACGG 59 14058794 14058812 GGAACTCCTTCACCCACTC 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0075706,FBtr0100445,FBtr0075703,FBtr0075708,FBtr0075707,FBtr0075705,FBtr0075704,FBtr0100444 1 8 9 91 3L 14747639 14750013 CTTGCTAAAGAATACACCATGC 58 14747569 14747587 GGTACACAAACTCCAGCAG 58 NA Nonspecific Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075636,FBtr0075634 2 2 3 91 3L 15104079 15104197 GGTTCAAGTTGTCCCACAC 59 15104252 15104270 CCTGTGGCTTTGAAGATCC 58 NA Drosophila melanogaster 61 CG12355 FBgn0040805 FBtr0113333 3 1 4 165 3L 15487684 15487703 TGGGTACTGCAGTATATGCC 59 15486415 15486571 TCCATGATGGACATGCCTG 59 NA Drosophila melanogaster 61 RhoGAP71E FBgn0036518 FBtr0075567,FBtr0075569,FBtr0075568,FBtr0290065 1 4 4 80 3L 15593905 15593925 GAGTGGATATGCAGCTTTCAG 59 15593966 15594346 CAAAGAATGTTGCAATGCGT 58 NA Drosophila melanogaster 61 pHCl FBgn0036542 FBtr0100037,FBtr0301510,FBtr0100036 3 3 5 81 3L 15857119 15857139 TTATATTGGTGACGTCGTCCT 59 15853117 15857076 GTTGTCACGCCTATCATCG 58 NA Drosophila melanogaster 61 brm FBgn0000212 FBtr0075526,FBtr0075524,FBtr0075525,FBtr0075523 3 4 4 91 3L 15964326 15964404 TACCATTCTAGGTCGAGGC 58 15964253 15964271 CATCGTCGATGGCTTTCAG 59 NA Drosophila melanogaster 61 Taf4 FBgn0010280 FBtr0301911,FBtr0075449,FBtr0075448 1 3 6 87 3L 16109266 16109284 TAACAGCAACACGACAAGC 59 16109334 16110656 GTTGGTCATAGAAGCTGCAG 59 NA Drosophila melanogaster 61 CG5151 FBgn0036576 FBtr0075488,FBtr0075487 2 2 2 98 3L 16135210 16135228 ATGCTATCGGTACAGACGG 59 16135006 16135151 AAATTGATCCCTATCATCGGGT 59 NA Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 3 4 4 67 3L 16346790 16346808 GCATCATCAACTTCACCCG 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 tra FBgn0003741 FBtr0075364 3 1 2 117 3L 16583851 16584117 AACCCAGCATCGAGATTCC 59 16583752 16583772 TGCAAAGTACGGAATCTTGTG 59 NA Drosophila melanogaster 61 Rbp6 FBgn0260943 FBtr0290066,FBtr0113428,FBtr0075285 1 3 4 127 3L 17067475 17070729 TGCATACGATAACATCATGTGG 59 17067293 17067311 CAGTTGGATAGGGCAGTCC 59 NA Drosophila melanogaster 61 noe FBgn0026197 FBtr0110844,FBtr0110845 1 2 2 97 3L 17393990 17394008 TCGTGTTATCAGGACGACC 59 17393911 17393929 GATTACACGAACGGGACAC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0300520,FBtr0299642 3 2 7 194 3L 17534496 17536615 GTTCGGCGAATGAAGACAC 59 17536922 17536942 CAATGAAGAATGTCCTTCCGT 58 NA Drosophila melanogaster 61 CG34251 FBgn0085280 FBtr0301012,FBtr0112445 1 2 2 101 3L 17670666 17676048 GAGTTTCAGAGTGTGCCAG 58 17676113 17676131 CCAGCTGTGGTAGAAATCC 57 NA Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185 1 1 2 80 3L 17723427 17740788 TCCACTACGATACAGAATTGC 58 17740829 17740848 CGTGTTAGCCATATTGTCGT 58 NA Drosophila melanogaster 61 nes FBgn0026630 FBtr0075021,FBtr0075020,FBtr0075019 1 3 3 85 3L 19252662 19253226 CCATTCTGGCAGGTTATCC 58 19252595 19252614 AAAGAACATGTGATGCACTG 57 NA Drosophila melanogaster 61 pip FBgn0003089 FBtr0075006,FBtr0075013 2 2 12 119 3L 19302781 19302855 AAGTGGCCTACTACTTGGG 58 19302680 19302698 ACTCGATCTCGTTGGTGAG 59 NA Drosophila melanogaster 61 CG9449 FBgn0036875 FBtr0290044,FBtr0290043 2 2 3 82 3L 19488009 19489659 CTGCATGTGGTATTCCGAC 58 19487945 19487969 GGATAGTAGGTCTCATTTACATAGG 58 NA Drosophila melanogaster 61 lush FBgn0020277 FBtr0301489,FBtr0074969 3 2 2 117 3L 19598219 19598237 CTAGACATGATCCGCAGTG 57 19598065 19598141 TTGTGTAGCACATAAGATCCTG 58 NA Drosophila melanogaster 61 Papss FBgn0020389 FBtr0111108,FBtr0074886,FBtr0074889,FBtr0074887,FBtr0074888,FBtr0074885 2 6 6 91 3L 19853428 19853510 AGACAGCATGGAGATCCTG 58 19853565 19853583 ACTCATCCTTCCTCTTGGG 58 NA Drosophila melanogaster 61 Su(Tpl) FBgn0014037 FBtr0302047 1 1 2 95 3L 19890505 19902363 GTAAAGCCACAAATCCAAGTG 58 19890430 19890449 TGTTGCTATACTGTGCAAGC 59 NA InUTR Drosophila melanogaster 61 CG6680 FBgn0036968 FBtr0074842,FBtr0074841 1 2 2 80 3L 20312175 20312194 GCCACAGGATGTATATGGAG 57 20312236 20312311 TTGTTGAAGGGAAACTTCCA 57 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 1 6 6 80 3L 20343566 20343665 AATTATACACCAAAGTGCCTCC 58 20343706 20343724 CCTTCTTCTCCTTGCCCTC 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300535,FBtr0302643,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300530,FBtr0302641 1 9 18 128 3L 20809815 20809833 ACTACATCCAGACGCATGG 59 20809925 20825955 TGACTTGTTCCCTCTCGAG 58 NA Drosophila melanogaster 61 CG10512 FBgn0037057 FBtr0078297,FBtr0078299,FBtr0078300,FBtr0078298 2 4 4 179 3L 21199652 21199670 GATCCCAACTGCTTTGCTC 59 21200617 21200640 CTTCAACTGATTCTCCAGATACTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 2 9 9 96 3L 21518731 21518749 GATGCTACTTGGAACACCC 58 21518809 21519094 GGCTCTAGGTCCTTAAGGT 57 NA Drosophila melanogaster 61 Smc5 FBgn0052438 FBtr0301601,FBtr0301600,FBtr0078372 2 3 3 82 3L 21562983 21563064 ATCGGGTTCAGGACTTCTC 58 21563110 21563128 GATCAGGTCTTCGTCACAC 58 NA Drosophila melanogaster 61 CG32441 FBgn0052441 FBtr0300058 2 1 2 80 3L 21567365 21567852 CGAACAGAATGGGATTCCTG 58 21567895 21567913 AACTTTCCGAGTTTGCAGC 59 NA Drosophila melanogaster 61 MED1 FBgn0037109 FBtr0302592,FBtr0078464 3 2 2 141 3L 21626128 21626146 AACTCTGGTGTCATCACTG 57 21625929 21626026 GCTGTCCATATCATTATACTGC 57 NA Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 1 2 2 80 3L 21819505 21819584 TTAGCAATGGGTTCAAGGTG 58 21819627 21819645 CCAACAATTCCTGACCCTG 58 NA Drosophila melanogaster 61 mub FBgn0014362 FBtr0301364 2 1 5 82 3L 21908046 21908066 TGTGTCTGGTACAACTAATGC 58 21908107 21908232 CTTTGCCTACATCATTGAACTC 57 NA Drosophila melanogaster 61 jim FBgn0027339 FBtr0078582,FBtr0100184,FBtr0078581 2 3 3 106 3L 22791957 22791975 CGTACAAGTGTGGTCAGTG 58 22791546 22791564 GTTGGGCATAGGACAACAG 58 NA DesignNoJunction Drosophila melanogaster 61 nrm FBgn0005629 FBtr0111148 1 1 2 80 3L 23017256 23018192 GCGCCAGGATAAATATCTCAC 59 23022950 23022969 ACGGTTCCCTTAGTGAAGAC 59 NA Drosophila melanogaster 61 Gel FBgn0010225 FBtr0078972 2 1 5 141 3R 61859 62281 TCTCATACGCAGTTTCCAC 57 62385 62404 CAAATAGCGTATATGCCCGA 58 NA Drosophila melanogaster 61 CG1090 FBgn0037238 FBtr0078912,FBtr0078911 2 2 2 80 3R 190216 190296 CGTTATATCATGCTTTGAGTCC 57 190336 190355 AGCTCCGTATTGAAATGGAG 57 NA Drosophila melanogaster 61 CG34357 FBgn0085386 FBtr0112567 1 1 2 80 3R 321844 322205 TTCAACTCCGTGTATGAGC 57 321782 321802 GAGCATTTGGAACATAGTGTC 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0301832,FBtr0078756,FBtr0078757 3 3 4 97 3R 1385910 1388001 AACACATTTGGCGATGACC 59 1385831 1385849 CTACCCTGGTAAATGCGCT 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 2 3 12 81 3R 1586683 1587378 AATTCGGACATGTTATGGAGC 58 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0300911,FBtr0300907 1 2 12 80 3R 1586682 1587380 CAAATTCGGACATAACTGGCA 59 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG2082 FBgn0027608 FBtr0078674,FBtr0300906,FBtr0300910 2 3 12 81 3R 1586683 1587378 AATTCGGACATGTTATGGAGC 58 1586622 1586641 TGAAGACGCTTCTGGTACTC 59 NA Drosophila melanogaster 61 CG2017 FBgn0037391 FBtr0078664,FBtr0114518,FBtr0078663,FBtr0078662,FBtr0078661 3 5 5 156 3R 1684298 1684374 CTTCTTCCAAGCCAAGGTG 58 1684160 1684178 CATCACCGAAGCACAATCG 59 NA Drosophila melanogaster 61 CG15186 FBgn0037448 FBtr0081674,FBtr0081672 2 2 3 81 3R 2308888 2315357 ACTACGATACTGAATTGGACAG 57 2315399 2315417 ATATTAATGGTGCGCAGCC 58 NA Drosophila melanogaster 61 Alh FBgn0261238 FBtr0081612 1 1 9 154 3R 2947472 2949643 CAACAAACAAGTTACAAGCTCC 58 2947339 2947359 CCATCTCCTTCATATCGTCCA 59 NA Drosophila melanogaster 61 CG17816 FBgn0037525 FBtr0300827,FBtr0113202,FBtr0081770 3 3 5 180 3R 3697534 3697552 TATACAGATGGACGCCGAG 58 3691469 3694094 ACTCATGTAGAGTAGCCGC 59 NA Drosophila melanogaster 61 Mkk4 FBgn0024326 FBtr0300443,FBtr0081892 2 2 2 61 3R 4476034 4476214 ATTTGTTTGCAACCGGATCC 59 4475992 4476013 ATTATTCAGGCTTAGCTGATCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG8136 FBgn0037616 FBtr0081909 3 1 4 111 3R 4547271 4547350 AACCACAAGTCGGAAGAGG 59 4547424 4547443 GCCGATAATTGACCAAGGAG 58 NA Drosophila melanogaster 61 CG9801 FBgn0037623 FBtr0081945,FBtr0081944,FBtr0081946 1 3 3 98 3R 4564427 4564514 TAAATATCTGGAGGGCCGA 57 4564347 4564366 GTATCCAACTTGAGAACGGG 58 NA Drosophila melanogaster 61 Pif1A FBgn0261015 FBtr0301877,FBtr0301876 1 2 4 80 3R 4612642 4616245 CGAAGGGATGTCAAGATAACC 58 4612582 4612601 CTCGAGCGCTGATTTATGTG 59 NA Nonspecific Drosophila melanogaster 61 Fps85D FBgn0000723 FBtr0082052,FBtr0082054 1 2 4 89 3R 5195422 5196744 CGGCCAGTATATCGCTCTC 59 5195351 5195369 GCAATCGAACCACTTCCTC 58 NA Drosophila melanogaster 61 Pnn FBgn0037737 FBtr0082126,FBtr0113210 2 2 2 164 3R 5566737 5566758 AATGACTCTGGTCTATCGACAG 59 5566939 5566957 CTTCTTGCCATCTTGGGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0112576,FBtr0112577 2 2 5 93 3R 5808009 5808027 GTTCCGATGCGTCTATCGA 59 5808083 5812379 GGAGTCCTTTCCCAAATGTG 58 NA Drosophila melanogaster 61 tws FBgn0004889 FBtr0082188,FBtr0082189,FBtr0082186,FBtr0082192,FBtr0082191,FBtr0082187,FBtr0082193,FBtr0082190 3 8 8 80 3R 5954403 5954421 CTCCAGGGATTACTTGAGC 57 5954227 5954361 TATTCATGAACCGGATAGGTC 57 NA Drosophila melanogaster 61 Cap-H2 FBgn0037831 FBtr0301311,FBtr0082273 2 2 4 80 3R 6589613 6589633 CTGTTGCTAATCGATTCAGGG 59 6589671 6589891 CTGGCGTTGATCTTCTAAATCTG 59 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 1 7 7 97 3R 6692601 6692619 TACGGTGAACAAGGAGGAG 58 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 Ugt35b FBgn0026314 FBtr0082375 3 1 1 75 3R 6995716 6995736 TCAGAGATGTGTTTATCCCAG 57 6995589 6995608 AAATTCATTGGTCCGCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082458,FBtr0082459 2 2 2 87 3R 7414840 7414858 GCATAAGTTCACGCACCTG 59 7414717 7414792 ATGAACCATAAGATCTTGCCTG 58 NA Drosophila melanogaster 61 CG6791 FBgn0037918 FBtr0082459 1 1 2 131 3R 7412202 7412220 TACCATCTAACGTGTCCGC 59 7411177 7412107 GAAGCAGTGGTGCTTTGTC 59 NA Drosophila melanogaster 61 Jupiter FBgn0051363 FBtr0082455,FBtr0082454 3 2 6 90 3R 7419479 7429872 AAAGAAGAGGGTGCTGAGG 59 7419407 7419425 GCGATTCTTCACGTTCCTG 59 NA Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082521,FBtr0082522,FBtr0082519,FBtr0082520 1 4 4 72 3R 7647036 7647054 AGCCTATGGTCAAGATGGC 59 7646923 7646941 ATTGGTCCCTCTGTCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6962 FBgn0037958 FBtr0082516 3 1 1 60 3R 7707762 7707782 CGAACTAGACATCAATCTGCT 58 7707668 7707686 ATTCTGACCATTCTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 2 15 15 81 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812485 7812568 CTTCCACATTATTCTCCTGCTG 59 NA Drosophila melanogaster 61 mfas FBgn0260745 FBtr0082503,FBtr0082489,FBtr0082501,FBtr0082496,FBtr0082492,FBtr0082491,FBtr0082493,FBtr0082490,FBtr0082497,FBtr0082500,FBtr0082495,FBtr0082498,FBtr0082494,FBtr0082502,FBtr0082499 3 15 15 82 3R 7812610 7812628 AAGAAGGTGACCCTCTTCG 59 7812484 7812567 TCTTCCACATTATTCTCCTGCT 59 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 3 2 3 93 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115990 8116010 ATCTATGGGACAGTTTCTGCT 59 NA Drosophila melanogaster 61 CG14395 FBgn0038073 FBtr0300769,FBtr0300770 1 2 2 106 3R 8497390 8497408 TTTCTCAACACCGGAGGAC 59 8497478 8497600 TCAACCAGACCAAACCCTC 59 NA Drosophila melanogaster 61 CG8795 FBgn0038139 FBtr0100149,FBtr0082774,FBtr0082773 1 3 3 91 3R 9157364 9157629 GTTATGCTCAGGAATGCCG 59 9157291 9157310 GAACGCTCTCCAATATGCAG 59 NA Drosophila melanogaster 61 Droj2 FBgn0038145 FBtr0082751,FBtr0082754,FBtr0082753,FBtr0082752,FBtr0082755 2 5 5 135 3R 9210276 9210294 CAATCGATGCAGAGCAGAC 59 9210483 9210501 TAACTCGATGTGCACTGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG34383 FBgn0085412 FBtr0112624,FBtr0290011,FBtr0112623 3 3 5 93 3R 9582301 9582319 AATCATCAGCAGTTCCGGA 59 9582374 9582621 CATCCAAGTTCCTGATCTGAC 58 NA Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 1 5 5 80 3R 10090935 10090956 CGATAACCTTGTAGTTGATGCC 59 10090816 10090896 GAATAGCAATTCGGCTCACAG 59 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083054,FBtr0083053,FBtr0301846,FBtr0113237 1 4 4 103 3R 11055702 11055720 GTTTGCTACTACTGCTGCC 58 11055856 11055874 TATGCACCGACTTCAGGAG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089960,FBtr0089968 3 2 13 133 3R 11127357 11127375 AGAGGAGACCTTTGAGACG 58 11128938 11129374 TGAGCAGGTCATCTTCGAG 59 NA Drosophila melanogaster 61 CG4546 FBgn0038373 FBtr0083184 1 1 1 88 3R 11672784 11672802 ATCTCGAAACTGGAGCAGG 59 11672918 11672936 TAGCCCTCAGTAGTGAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0300895,FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 3 5 5 84 3R 11723325 11723343 AGAAGCTGGACGAGATCTG 58 11723135 11723281 CCTTTCAGTTGGTTGTAAGACTC 59 NA InUTR Drosophila melanogaster 61 glob1 FBgn0027657 FBtr0083247,FBtr0083246,FBtr0083248,FBtr0083245 1 4 5 194 3R 11723421 11723504 AGCTAAGTGGAAATGCTCG 57 11723121 11723142 CATCCAGGATAACTCCTTTCAG 58 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476 1 1 2 114 3R 11995751 11995824 TACCTCTTAACAAGATCGAGGG 59 11995899 11995917 TCTGTCTTCTGACGCACAG 59 NA Drosophila melanogaster 61 gish FBgn0250823 FBtr0100331,FBtr0100332,FBtr0083264,FBtr0083262,FBtr0083261,FBtr0301304,FBtr0100333 3 7 9 80 3R 12119860 12122388 GATAGCGAAACAACTTCTCCA 58 12122428 12122448 AAGTTCTCTGGTTTCACATCC 58 NA Drosophila melanogaster 61 CG42342 FBgn0259244 FBtr0301062,FBtr0299894,FBtr0299897,FBtr0299895,FBtr0299896 3 5 5 123 3R 12376455 12376593 CCGTGAAGGGTCTGAAGAG 59 12377363 12377382 TTTATGACTGTGGAAGCGGA 59 NA Drosophila melanogaster 61 Fas1 FBgn0000634 FBtr0112803 2 1 6 91 3R 12451897 12451915 GATTTGGCGGACAAATTGC 58 12455312 12457341 AGGCTGTAGAACCTAACTGG 58 NA Drosophila melanogaster 61 Cctgamma FBgn0015019 FBtr0302370,FBtr0083338,FBtr0302371,FBtr0083337 3 4 4 81 3R 12474342 12474429 GGTAGACATTAAACGCTATGCC 59 12474470 12474489 CATCACGCCCTTAAGAACAC 59 NA Drosophila melanogaster 61 cpo FBgn0000363 FBtr0300241,FBtr0083534,FBtr0083535,FBtr0083537 1 4 7 80 3R 13833031 13834593 TAAACAGGATCTGCAGGGTG 59 13834636 13834654 TTCGTGTTACTCTTGGCGA 59 NA Nonspecific Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083534,FBtr0300242,FBtr0083535 3 3 7 92 3R 13758155 13758173 TGCTCAGTAGTGTCCTGTC 58 13763297 13792208 ACGAGTCAGTTGAACTTGGT 59 NA InUTR Drosophila melanogaster 61 cpo FBgn0000363 FBtr0083535 1 1 7 112 3R 13835713 13835731 TCATCCGCTAGCCTATTCG 59 13835807 13835959 TCATTTGAGTTGGCACCTG 58 NA Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 1 2 2 81 3R 13837363 13837384 TGTTGTTAACTCACTACAGCAC 59 13837424 13837826 CTGCTGTTGGTCTCTAAAGAG 58 NA Nonspecific Drosophila melanogaster 61 CG7675 FBgn0038610 FBtr0083582 2 1 3 167 3R 14205075 14205942 TCACCGAGACAAAGATGGAG 59 14204669 14204687 TCGTCTCCTTGACGATCTC 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 1 14 14 80 3R 14260002 14260023 ATCATCCAACTGTGATAACTCG 58 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0083750,FBtr0100549,FBtr0083749,FBtr0100548 1 4 4 96 3R 14981512 14981597 GGAAGCCACTGGTATGGAG 59 14981434 14981452 GTCAAGCACCTTGTTCACG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0083787,FBtr0301380,FBtr0301379 3 5 7 127 3R 15579567 15579980 GGAATAAATGGCACAGATGGT 58 15586012 15586030 TCATCCGTCCACTGTTCAC 59 NA Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083827 1 1 5 124 3R 15842472 15842565 AAAGGATGGCAATCTCTTGAC 58 15842651 15842669 TAAGTGCTTCATCATCCGC 58 NA Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 1 3 3 84 3R 16042881 16045582 GGAAATAGGAATGAAGCCGC 59 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 1 5 5 82 3R 16396363 16396823 TGTCGACAGGTAAATCCTCTG 59 16396867 16396885 TTGTCTATCTCCCGAGCCT 59 NA Drosophila melanogaster 61 CG17838 FBgn0038826 FBtr0113256 3 1 8 121 3R 16582964 16617479 TAAGTTTGAAATGGCGGAAGG 59 16617562 16617580 TGTCCAGACCGTATTCCAG 58 NA Drosophila melanogaster 61 CG5621 FBgn0038840 FBtr0110956,FBtr0083978 2 2 2 80 3R 16727881 16727899 TTGGCTTCATCCTAACGAG 57 16727943 16728161 TCTCATAGACGAGACCCAC 57 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301585,FBtr0112916,FBtr0112915 3 3 16 94 3R 17010983 17011004 CTTGATGTGCAATCCTTACCAG 59 17011298 17028183 ATGTGAGCACTTTGCACAG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084068 2 1 22 106 3R 17182685 17200794 ACAGAGGCTCAAGTATGCG 59 17182597 17182615 TTAAAGGCCAGCAGTTTGC 59 NA Drosophila melanogaster 61 CG7956 FBgn0038890 FBtr0100124,FBtr0110891 3 2 5 182 3R 17351005 17351023 ATCCATCGTTACGACCAGG 59 17351166 17351263 CGCGCCAAATAATAAGAAAGGA 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0084161,FBtr0301327 2 2 6 105 3R 17643798 17643882 CGGTTATCGTTTGAAGCAC 57 17643711 17643729 CGGTTATGGAGAGTCTGTG 57 NA Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 2 2 2 80 3R 18113617 18113635 TAGAGGTCTTATCGTGCCG 58 18113679 18115216 TCGCGATCATGAGATCTGG 59 NA Drosophila melanogaster 61 CG31169 FBgn0051169 FBtr0301029 1 1 3 106 3R 18209069 18209179 TATGCAACACGATGAGGCT 59 18209303 18209321 CGTCCCTTTCATGGTTCAG 58 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084219 3 1 3 184 3R 18215782 18216920 TTGAAGAGCAAACTCTCCC 57 18217129 18217148 AATTCCAACTCGGATTGGAC 58 NA Drosophila melanogaster 61 CG6969 FBgn0039005 FBtr0301220,FBtr0084303 2 2 2 106 3R 18523290 18523368 TCACCAAAGCTCAATTGGC 59 18523436 18523456 CAGTCTCTGCATAACATGCTC 59 NA Drosophila melanogaster 61 p53 FBgn0039044 FBtr0084359,FBtr0301765 1 2 3 185 3R 18878909 18879086 AAAGAAAGCACTGATTCCGAG 59 18876814 18876832 GTCCTGCAGCATCATTTCG 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 1 7 7 82 3R 19013648 19013667 GATCATTTGGAGAGCGAACG 59 19013512 19013603 GGATCCCGTAGGTACTGGA 59 NA Drosophila melanogaster 61 Ir94d FBgn0259193 FBtr0299677 3 1 1 61 3R 19228921 19228939 AGCTACTTAAGGTCGTGGC 59 19229509 19229532 GTAGCTGTAGACAATCAAAGACTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10175 FBgn0039084 FBtr0084423,FBtr0084421,FBtr0084422 1 3 3 80 3R 19348982 19349057 TTCGCGAAATATGGCTCTC 58 19348920 19348938 ATTGGTGGGATCGATTGGT 59 NA Drosophila melanogaster 61 CG31140 FBgn0051140 FBtr0084497,FBtr0113392 1 2 5 123 3R 19799264 19799879 GACTACTCGTGTCCCAGTC 59 19799966 19799984 GTTTCGATTGCTCAAGCCT 58 NA Drosophila melanogaster 61 CG5902 FBgn0039136 FBtr0084501,FBtr0084502 3 2 3 191 3R 19812924 19813001 CAGTAGCAGAAGACGATTAGAG 58 19813153 19813171 TGTTGTAGTGGGAGTTGGA 58 NA InUTR Drosophila melanogaster 61 Rox8 FBgn0005649 FBtr0084592,FBtr0084591,FBtr0084593,FBtr0084594 3 4 4 100 3R 19870979 19871169 GGAAATCAAGGTCAACTGGG 58 19870898 19870916 CAATCTCGGGACTGAGGTC 59 NA Drosophila melanogaster 61 twin FBgn0011725 FBtr0084567,FBtr0084568,FBtr0084571,FBtr0084566,FBtr0084569 2 5 6 81 3R 20045867 20045948 TAGAGATTACTGGCTGCGT 58 20045804 20045822 TTGTCGTTCAGGTAGAGGG 58 NA Drosophila melanogaster 61 crb FBgn0259685 FBtr0084603 3 1 2 110 3R 20132598 20133929 CTCATCGGGTTACAACTGTC 58 20134000 20134020 CAAGTTCCTCCATTGAGACAC 59 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324 2 1 2 82 3R 20175945 20177781 CACTGATCGAAGAATCCAGC 58 20177826 20177844 TATGTTGGACGGTCCAGTG 59 NA Drosophila melanogaster 61 slo FBgn0003429 FBtr0084683,FBtr0100635,FBtr0084685 2 3 18 99 3R 20521086 20521106 GTCATGAGGACATTAAGGACG 58 20521838 20527819 TGGTGTTCATCTAAGTCATCG 57 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 1 5 6 87 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180029 21181957 TGATTTGTGCCATATAGCGAC 58 NA Drosophila melanogaster 61 jigr1 FBgn0039350 FBtr0084886,FBtr0113288,FBtr0084889,FBtr0084888,FBtr0113287,FBtr0084887 2 6 6 83 3R 21474761 21474779 AAACAAGCGGTTCAAGGAC 59 21474826 21474916 ATACTGGTGGCATCGTAGC 59 NA Drosophila melanogaster 61 CG4774 FBgn0039360 FBtr0084931,FBtr0084929,FBtr0084930 2 3 3 85 3R 21511213 21511297 ACTATTTGGATCACCCAGC 57 21511146 21511164 ATTCATGACGTAGCTGAGG 57 NA Drosophila melanogaster 61 Nf1 FBgn0015269 FBtr0084952 3 1 3 111 3R 21819199 21819399 GGATAAAGCATTCTCATCGGA 58 21819471 21819490 GTTAATTCGATGTTTGGCGC 58 NA Drosophila melanogaster 61 scrib FBgn0261263 FBtr0302094,FBtr0302096,FBtr0302099,FBtr0302095 2 4 10 115 3R 22416344 22416362 CGATAATGACGACAGCGAC 58 22416437 22420517 CAATTTCATCGAGTGGATTCCTC 59 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 2 2 3 107 3R 22788798 22788893 TCAGCTTCACTGAGTTCGT 59 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 CG31077 FBgn0051077 FBtr0301977 1 1 1 60 3R 22825490 22825511 AACTAGGACGGATGTATTACGA 58 22825593 22825611 GGACGCATCAGACATATCC 57 NA DesignNoJunction Drosophila melanogaster 61 spz FBgn0003495 FBtr0085140 3 1 12 89 3R 22893139 22893159 AAACAGTGGCAGACTATAAGG 57 22892378 22893088 TGTCCGTCCTCTGTAAGTG 58 NA Drosophila melanogaster 61 CG5938 FBgn0046247 FBtr0085161,FBtr0113355,FBtr0085162,FBtr0085159,FBtr0085160 3 5 5 125 3R 23101497 23102022 AACATGACGGTATTTGGGC 58 23102111 23102129 GGATTTCTTCAGCACTCCG 58 NA Drosophila melanogaster 61 Mtl FBgn0039532 FBtr0085191,FBtr0302591,FBtr0085192,FBtr0085193 2 4 4 190 3R 23463712 23463799 TATGTGCCCACAGTCTTCG 59 23463952 23463971 GAGGTGACGTTCTCAAAGGA 59 NA Drosophila melanogaster 61 CG12428 FBgn0039543 FBtr0085238,FBtr0085237,FBtr0085240,FBtr0085239,FBtr0085236 1 5 5 126 3R 23529733 23529751 CGGAGGAGGTAACTTTGTG 57 23529569 23529643 AATGAACACAGCTTCCGAG 58 NA Drosophila melanogaster 61 larp FBgn0260724 FBtr0301178,FBtr0301179,FBtr0301181,FBtr0301180 1 4 4 80 3R 24146990 24147104 TATGAAACAGGTCAACTGTACG 58 24146931 24146949 CACCTCCAACTTCTCACCA 59 NA Drosophila melanogaster 61 CG14516 FBgn0039640 FBtr0085382,FBtr0085383 2 2 2 87 3R 24970860 24970878 AGTTTCCACCACGGTAGTG 59 24970929 24971007 CTGTGAGCCCATGTAGGTC 59 NA Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 3 3 4 114 3R 25142076 25142449 GTGAATCGGACTCATTCGTG 59 25141981 25142000 CTACAGTAGATGGTGAGGGC 59 NA Drosophila melanogaster 61 Trc8 FBgn0039668 FBtr0085430,FBtr0085432,FBtr0085429 2 3 4 80 3R 25327202 25327436 TTGGACCATCAGACTAATCCA 58 25327142 25327160 GTGGCCGTCATTAGATCCA 59 NA Drosophila melanogaster 61 ATPsyn-gamma FBgn0020235 FBtr0085540 2 1 3 126 3R 25574481 25574554 TAACGCAAGGGAATCTTCGA 59 25574374 25574392 AATCATCTTCAGGGTGGCC 59 NA InUTR Drosophila melanogaster 61 ncd FBgn0002924 FBtr0085534 1 1 1 70 3R 25631445 25631463 AAGAGGAGCTATCCGAGCT 59 25631334 25631352 TTCTGTGCTTAGAGCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 Axn FBgn0026597 FBtr0085554,FBtr0290030,FBtr0085553,FBtr0085555 3 4 5 84 3R 25857054 25857152 GAGCCATCTACAGATTCTTGC 58 25857198 25857216 GGATTCGTCTTGATGGCCT 59 NA Drosophila melanogaster 61 Fer1HCH FBgn0015222 FBtr0085633,FBtr0085632,FBtr0085631,FBtr0085634 2 4 5 82 3R 26211973 26212053 GATCAATGTGCCGACTGTG 59 26211909 26211927 CCTTGATCTCCAGGTCGAG 59 NA Drosophila melanogaster 61 CG12069 FBgn0039796 FBtr0300752,FBtr0085728 1 2 2 229 3R 26520389 26520476 TTGCCAAGAAAGTGGAAACC 59 26520179 26520203 GAAATAACTGGGCATCTTATAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG1750 FBgn0039836 FBtr0085767,FBtr0085768 1 2 2 95 3R 27079869 27079887 GAGCCGAGTTACTTGTGGA 59 27079737 27079810 TCTTGGGAGCATAGCTGAC 59 NA Drosophila melanogaster 61 CG11337 FBgn0039846 FBtr0300881,FBtr0113314,FBtr0085812,FBtr0085811 3 4 4 108 3R 27230211 27230231 CTCAAATGCCTAAGTTTGTCC 57 27230067 27230141 TCATGTTACGTCCATTGCT 57 NA Drosophila melanogaster 61 CycG FBgn0039858 FBtr0085802,FBtr0085800,FBtr0085803,FBtr0085801,FBtr0085799 2 5 5 80 3R 27426314 27426404 TACATGAGGATTCCTGATCGC 59 27426254 27426272 GTTCTGCCCGTTGTAATGG 59 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0300799,FBtr0300798,FBtr0089119,FBtr0300796 1 6 7 140 4 258146 258164 CACCTCGACACTGTATCAG 57 261022 261286 GAGGCATATAGCTTTCGGT 57 NA Drosophila melanogaster 61 Syt7 FBgn0039900 FBtr0089138,FBtr0089137,FBtr0100397,FBtr0089134,FBtr0114475 3 5 6 199 4 323145 325652 TATAGTCTTCGGGCTGCTC 58 322902 322923 CCAACTGAAGAAATGATTTGCG 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300555,FBtr0300558 1 2 6 89 4 352620 363557 GCAAACACAATTGCGTGTG 59 352549 352569 CGTAAGCTATGTAAGCTGTGC 59 NA Drosophila melanogaster 61 Hcf FBgn0039904 FBtr0089124,FBtr0089126,FBtr0089127,FBtr0089125 1 4 4 80 4 383498 383581 GCTAGAAACAGACTCCATGAC 58 383623 383641 GTAGAACTGTGCAACGAGC 59 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 3 4 7 180 4 1080190 1080208 AACACAACCTCTCAACAGC 58 1079961 1080047 ATGAGAAGAGTCCATTGCAG 57 NA Drosophila melanogaster 61 CG40196 FBgn0058196 FBtr0113830,FBtr0113829,FBtr0301121,FBtr0113831 3 4 4 122 U 1092306 1092326 CCAGATCTAAGTTGCGATCCT 59 1092151 1092226 GTAAAGAGAATTCACTGCTCGAC 59 NA Drosophila melanogaster 61 CG3638 FBgn0261444 FBtr0301968 1 1 3 137 X 1113610 1113763 ATCTGTACTCGAACCAGGC 59 1113491 1113511 AGAACTCATCATACTCGTGCT 59 NA Drosophila melanogaster 61 CG32813 FBgn0052813 FBtr0070220,FBtr0070222,FBtr0070221,FBtr0070223,FBtr0290070,FBtr0070219 1 6 6 296 X 1284076 1284312 TACGACGACTCCAAGATGC 59 1284572 1284590 GGTAATCCCGTTGCTAGAC 57 NA DesignRelaxed Drosophila melanogaster 61 futsch FBgn0259108 FBtr0112628 1 1 2 126 X 1308711 1321719 GCTCAAGGGATTCCTCTCC 59 1326777 1326795 ATACTGGATGAGCCGTTCG 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 2 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744716 1744736 CGCTACTGGAGTCTATATCCT 58 NA Drosophila melanogaster 61 CG14814 FBgn0023515 FBtr0070369,FBtr0070370 3 2 2 96 X 1758265 1758283 ATATTCAAGCAACAGCGGT 57 1758125 1758208 CGCAGAGGTTTAGTAAATATGC 57 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 3 4 5 90 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786136 1787442 TGGTAGAGTATCATATCCTTGCTG 59 NA Drosophila melanogaster 61 CG32803 FBgn0052803 FBtr0100306,FBtr0070356 3 2 2 60 X 1795104 1795122 TTTACAGGTTTGCTGGTGC 59 1795011 1795029 CGAAGAACACCATGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11596 FBgn0023522 FBtr0070319,FBtr0070318 2 2 3 81 X 1821880 1821899 GAACCTTCGTCATCAACGAG 59 1821941 1822375 GCATATGGCCCATAGTAAAGG 58 NA Drosophila melanogaster 61 Actn FBgn0000667 FBtr0070344 3 1 3 80 X 1922777 1924259 TGGATCCAGATGATCTCCA 57 1922715 1922733 AGCAGTGATAGTACGAGGA 57 NA Drosophila melanogaster 61 CG4199 FBgn0025628 FBtr0070334 3 1 7 120 X 1965610 1965887 TTGTTGTGGAGAGTGGTGG 59 1965508 1965527 GAGTATCCTCCAGGATTGGC 59 NA InUTR Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378 2 1 3 98 X 1989340 1989358 CTACATGGAGAATGGCGAG 57 1989420 2002421 TGAAACCATCTTTCCGTGG 58 NA Drosophila melanogaster 61 CG2712 FBgn0024975 FBtr0070488 2 1 1 60 X 2627170 2627189 GTTAGAAAGATCCGAGCCAG 58 2627271 2627290 CTTCCTAGCCAGTTGTTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 ec FBgn0000542 FBtr0112801,FBtr0070606,FBtr0112802 2 3 3 178 X 3745127 3745145 CTTCGAGCTCCTTCTCCAC 59 3745287 3745985 AGACGTAGTGCACCATCTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Vap-33-1 FBgn0029687 FBtr0070619,FBtr0070618,FBtr0070616,FBtr0070617 3 4 4 98 X 3846169 3846187 CTGAGAGTCTGGACTTGCT 58 3846246 3846812 GTGTGATTTGATCCTTCAAGTG 58 NA Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 3 3 5 84 X 4248515 4248533 GAACTTGCGTCTCATCACG 59 4248581 4251088 ACTCAATCGCATCCAATGC 59 NA Drosophila melanogaster 61 CG12688 FBgn0029707 FBtr0070653 2 1 1 70 X 4275985 4276003 GACCAAGAAGATCCAAGCA 57 4277107 4277125 TCGGAGTGTCCTCTAAGTC 57 NA DesignNoJunction Drosophila melanogaster 61 ovo FBgn0003028 FBtr0070738,FBtr0070739,FBtr0301914 1 3 5 127 X 4961267 4962173 CACTCATCCAAAGCTTGGG 58 4962264 4962282 ATCGATGTTGCGAATTCGG 59 NA Drosophila melanogaster 61 rg FBgn0086911 FBtr0110993,FBtr0299589,FBtr0290088 1 3 5 175 X 5097416 5097434 GAGCTGCTGGATCATTGTC 58 5111588 5115289 ATCTCGATGAGCAGGTCTG 59 NA Drosophila melanogaster 61 yu FBgn0029764 FBtr0070795,FBtr0070796,FBtr0070794 1 3 3 80 X 5309943 5310238 CCTCTACAATCTACAACTGAAACTG 59 5309887 5309906 ATATGCGACCCAGATAGCAC 59 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 3 2 2 122 X 5604994 5605518 ATATTTCTGATCGGCTATGCCT 59 5604893 5604911 CTTGTCCTCGTGACTCAGG 59 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 3 3 3 101 X 6262082 6262570 CAGGAATCGGTTAAGTCTCAG 58 6262633 6262651 GAAGAATACCCTTTCGGCC 58 NA Drosophila melanogaster 61 CG33665 FBgn0053665 FBtr0302414 3 1 1 183 X 6372861 6372880 GGCAAGTAAGGTTCGATCAC 59 6372638 6372656 CTCTTGTCTGATATCGCGT 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 3 8 8 127 X 6580674 6580756 GTCCGGAGATCCTACAGTG 59 6580847 6580865 CAGGTACTCCACATAGGCG 59 NA Drosophila melanogaster 61 C3G FBgn0259228 FBtr0299793,FBtr0299795,FBtr0299791 1 3 6 153 X 6681508 6681528 GATGAGAATAGTCAGTGCTCC 58 6680837 6681393 ACACGAAACTGTAGCTGAC 57 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 1 5 6 105 X 6701674 6702857 CAATTATTCCACGTTTGGGTC 57 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 3 5 6 107 X 6701673 6702856 CCAATTATTCCACGTTTGGGT 59 6702924 6702943 GATATTCTCGTGGGATCCCG 59 NA Drosophila melanogaster 61 Nrg FBgn0002968 FBtr0301763,FBtr0071208 1 2 6 81 X 8442487 8442505 TGAGTTCAGCGAACAAACC 58 8442548 8445792 GTAAATTGTCCTGTATCGCCA 58 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 1 4 4 80 X 8458337 8458356 TAGTCGAGATCTTTGGCTCC 59 8458398 8458525 CCCACAAACCTAACACAACG 59 NA Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 2 4 4 80 X 8458342 8458361 GAGATCTTTGGCTCCTTTCG 58 8458402 8458530 CTTCTCCCACAAACCTAACAC 58 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219 1 1 3 105 X 8491652 8491670 GAAGAGTATGCACCGTTCG 58 8491739 8492116 TGAATAACGTCCGAACGTG 58 NA Drosophila melanogaster 61 Moe FBgn0011661 FBtr0071275,FBtr0071272,FBtr0071276,FBtr0071269,FBtr0071277,FBtr0071271,FBtr0071273,FBtr0071278,FBtr0071270,FBtr0071274 2 10 10 157 X 8768350 8768368 GAGAACGAGAACGAGGAGG 59 8768134 8768229 TGTTTCAGAGCCTTGAGCT 59 NA Drosophila melanogaster 61 l(1)G0232 FBgn0028341 FBtr0071405,FBtr0071406,FBtr0100193,FBtr0100192,FBtr0071404,FBtr0071407 3 6 6 85 X 9524046 9524066 GCCGTCGGATTATATTAATGC 57 9523916 9524001 TCTTTGGTAATGGACCTTGAG 57 NA Drosophila melanogaster 61 Rph FBgn0030230 FBtr0071502,FBtr0301558 3 2 2 94 X 10644117 10644197 CGTCAAGATCCAACTCAAGC 59 10644042 10644060 ACTCCTCGTTGTAGATGGG 58 NA Drosophila melanogaster 61 Dlic FBgn0030276 FBtr0073441,FBtr0073443,FBtr0073442 3 3 4 119 X 11049248 11055098 AAGGAGAACCTATGGTCGG 58 11055181 11055199 AATGAGTGTCGTCTTTCCG 57 NA Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 3 2 2 89 X 11349145 11349163 GCCGCAAACTATTAATCCG 57 11349216 11349324 TCCAGGAGGTCATTTACGT 58 NA Drosophila melanogaster 61 CG10353 FBgn0030349 FBtr0114452 2 1 2 87 X 11777190 11777211 CGTCTGTTAAGAACTAGTAGCA 57 11775926 11777145 GTCTGTATGTCCTTGATTTCCA 58 NA Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0073803 1 1 2 151 X 13479983 13480001 AATGGGTTGGCCAAATACC 58 13480116 13483963 GGCCTTTAACTTCGACGTG 59 NA Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443 3 1 2 115 X 13479982 13480001 AAATGGGTTGGCCAAATACC 59 13480078 13483964 TGGCCTTTAACATAGTCCGG 59 NA Drosophila melanogaster 61 CG11178 FBgn0030499 FBtr0073805,FBtr0073804 3 2 2 248 X 13502356 13502442 AACTAGCACAAACCATGCA 58 13502648 13502672 GATTCTGGAATGTAACTGAGATCTC 59 NA DesignRelaxed Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 3 7 8 84 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665217 13665310 TCCAGGCAATCAAAGAATTCC 59 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 CG14408 FBgn0030581 FBtr0073991 1 1 4 112 X 14724370 14724473 CTCTGTTCGCCATACTACG 57 14724276 14724294 TTGTACGTTAACTTCGCCG 58 NA Drosophila melanogaster 61 Rhp FBgn0026374 FBtr0074096,FBtr0074095 2 2 2 80 X 15687266 15687350 AACTACTTGAAGCCATTGTCG 59 15687392 15687410 AAATCCGGATGAAATGCCC 58 NA Drosophila melanogaster 61 Tob FBgn0028397 FBtr0301652,FBtr0301653,FBtr0074255,FBtr0074256 3 4 4 80 X 15975869 15975889 CAAATGAACTTTCCGTGTGGA 59 15975306 15975830 TGTAAAGAATCTTTACCGCTCC 58 NA Drosophila melanogaster 61 CG9911 FBgn0030734 FBtr0074243,FBtr0074241,FBtr0074242 1 3 4 80 X 16190155 16190352 CCTAGTTGCGATTCTACAGC 58 16190094 16190114 ATATTATCACTGGTCATGGGC 57 NA Drosophila melanogaster 61 CG3632 FBgn0030735 FBtr0112988,FBtr0112990,FBtr0112991,FBtr0112989 2 4 4 84 X 16193686 16193704 GCAGTGGCTTGATCTTGTG 59 16193750 16193839 CGCCAGTTTGATCAAATAGCT 59 NA Drosophila melanogaster 61 CG9992 FBgn0030744 FBtr0074308,FBtr0074306,FBtr0074310,FBtr0074307,FBtr0074309 3 5 5 110 X 16277019 16277038 CTCACCGATCCCGTATAGTC 59 16276866 16276947 ACAAAGTTGTGCAAGTCCTG 59 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275,FBtr0074274,FBtr0074273 3 3 3 89 X 16310687 16310705 AAACTGGAAGAGTCCAAGC 57 16310758 16310836 TATATCCAGCCGTAGAGCA 57 NA Drosophila melanogaster 61 Nup153 FBgn0061200 FBtr0113475,FBtr0074284,FBtr0299587 1 3 3 97 X 16494339 16494423 GCAACAACTCCATCATGGG 59 16494484 16494502 GTTCCCATCTTTGGACGAC 58 NA Drosophila melanogaster 61 CG4829 FBgn0030796 FBtr0074336,FBtr0074338,FBtr0074337 2 3 5 81 X 16717174 16717194 TCGTGCTAATCTGCTTTATCG 58 16717237 16717635 GTCGATTTAGGCCAGTCAC 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0110991 3 1 6 100 X 17157003 17162564 GGATATTTGCTACTTCTCCACG 59 17162625 17162643 ACTTGGACTTCTGCTTGCT 59 NA Drosophila melanogaster 61 CG12985 FBgn0030881 FBtr0074494 3 1 1 152 X 17778437 17778455 GAACAGTGAGACGAACGTG 58 17778732 17778753 TTCTCCTCGATATCCATGTTCG 59 NA DesignNoJunction Drosophila melanogaster 61 GS FBgn0030882 FBtr0300971 2 1 6 67 X 17785912 17785930 AATACGATAGCATCGGGCT 58 17785958 17786496 CTAGGCAACAATCTTTGTATGG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089658,FBtr0089660,FBtr0089662 2 3 8 98 X 17824689 17824707 CTTCTATCACCGCGAAACG 59 17824461 17824628 AAATGTTGACCTAGTGCACC 58 NA Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 3 3 3 81 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027153 18027172 CGTACGTGTACATGAGAGTC 58 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074580 3 1 2 119 X 18209706 18209724 ATTCTTGGAGCGACTACAG 57 18209360 18209623 TTGGAGGTAGAAATGCGAC 57 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074572,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 2 6 6 80 X 18286506 18286593 GTTCATCAAACATCACCAGGT 58 18286446 18286464 TTCAGGACATAGACACGCG 59 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0301545 1 1 2 129 X 18533598 18533617 CTTAACATCCAACGCATCGG 59 18531811 18533508 TGTATTTATCTTTCGCGCTGC 59 NA Drosophila melanogaster 61 Rip11 FBgn0027335 FBtr0074616 3 1 2 129 X 18532381 18532399 GAGCACAACTTCCTAACGC 59 18531811 18532291 TGTATTTATCTCGCTTGTTGCC 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 3 2 4 98 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040090 19040108 TGGAGAATCGTTGACTGCT 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299623,FBtr0299624 2 2 4 113 X 19040168 19044854 AGGAGGACATGATTGTGCC 59 19040073 19040091 AGACGCTCTTATAGCGCTG 59 NA Drosophila melanogaster 61 Tao-1 FBgn0031030 FBtr0074773,FBtr0074771,FBtr0074774,FBtr0074772 3 4 4 80 X 19465918 19466009 TCGAGAATAAGATGGACGCC 59 19465857 19465877 TATGCTTCTCGTGTTTCATGC 59 NA Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733 2 1 2 185 X 19499544 19499565 AGGCTAACAAGAGGAATATCCC 59 19499711 19504427 AGTTTGTCGTTGAGCTGGT 59 NA Drosophila melanogaster 61 Zw FBgn0004057 FBtr0074749,FBtr0074748 2 2 2 60 X 19565031 19565050 ATCAAGCAGATCTGCATGTC 58 19565155 19565176 CGAAAGGCTTCTCGATAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 D2R FBgn0053517 FBtr0070034 2 1 5 81 X 19905586 19907142 CACCTAAGGTAAATGGAGCC 58 19905524 19905545 GAAGTAGAGCATATCACATCCA 57 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 2 4 13 132 X 20105880 20105898 CTACACAAAGCAGACCCAG 58 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14621 FBgn0031183 FBtr0077344 3 1 1 71 X 21847966 21847984 TGGCTTTACATGGACAGCT 59 21848371 21848393 GGCAATAACTCGATAGTCTAGGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077349,FBtr0077348,FBtr0077346,FBtr0077347,FBtr0077350 2 5 5 101 X 21868783 21868863 AGATACTCCACGAATTTGCCA 59 21868926 21868944 GATGTTTGGTCGAGAACGC 59 NA Drosophila melanogaster 61 stnB FBgn0016975 FBtr0302020,FBtr0302021 3 2 2 81 X 22386913 22387149 CACCATCAAATTTCAACCACC 58 22386852 22386870 AAGTTCACGATTCTTGGGC 58 NA Nonspecific Drosophila melanogaster 61 tRNA:G3:35Bb FBgn0011863 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A982a FBgn0082943 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-6-3 FBgn0046817 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:649 FBgn0065087 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR33534 FBgn0053534 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi28S-2149 FBgn0086664 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snmRNA:400 FBgn0065095 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:S7:12Ed FBgn0011982 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Psi18S-1854c FBgn0083040 FBtr0113567 1 1 1 67 X 17039340 17039358 TGATCCCTACAGCGTTGTG 59 17039291 17039315 CTTAAGAGGAATAGCTAATCATGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40486 FBgn0069972 FBtr0111188 1 1 2 136 X 22361333 22361351 ATCAATCCACCTGGTGACG 59 22360939 22361233 GGAGTGATGCTTGTGACCT 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901,FBtr0299900,FBtr0299899 2 4 4 110 X 21313528 21313546 ATTGGTGGGATTAGGAACG 57 21312769 21313456 GAAACGGTAAGATCAATGCAG 57 NA Drosophila melanogaster 61 pen FBgn0015527 FBtr0077223 1 1 1 95 X 21219093 21219111 TAGTGCCTCACATGCTGTC 59 21218948 21219035 TCTTGATAATGGCTCTGCGA 59 NA Drosophila melanogaster 61 CG32523 FBgn0052523 FBtr0077183 2 1 1 131 X 21089176 21089262 GAATGATGTAGTTCCGGCAG 58 21089356 21089374 AAATCGTTGTGTCCACCAG 58 NA Drosophila melanogaster 61 CG15445 FBgn0031161 FBtr0077252,FBtr0077251,FBtr0077253,FBtr0077250 1 4 4 91 X 20989791 20989905 TAATAGAGATGGAGGATCAGAATGG 59 20989952 20989972 CTTCTCACAGAATCCCAAACC 59 NA Drosophila melanogaster 61 CG42579 FBgn0260869 FBtr0301565 1 1 1 60 X 20398847 20398865 GACTACCCAGAAGAAGCGT 59 20398887 20398907 TTCCAGGTCCTCTAGTTTCTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Sdic4 FBgn0053499 FBtr0089612 2 1 1 60 X 20092373 20092391 CCTCTTCCTAACCTCGTCC 58 20092264 20092350 CTTTGTGTCCTTTAGCGACC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33496 FBgn0053496 FBtr0089609 3 1 1 100 X 20081446 20081464 GAGTACAAGGAGCTCTCCG 59 20081270 20081382 TGGACGCACTCAACTATGG 59 NA Nonspecific Drosophila melanogaster 61 Sdic1 FBgn0067861 FBtr0089604 2 1 1 289 X 20068893 20068978 TCTGGTCGCTAAAGGACAC 59 20068622 20068640 CTAGATCTCGTCACCCTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG9577 FBgn0031092 FBtr0070007 3 1 1 129 X 20061145 20061234 ATGTGGCTGGAGATCAAGG 59 20061327 20061345 GGCCCACGTTTATCATGTC 59 NA Drosophila melanogaster 61 Alr FBgn0031068 FBtr0074794 2 1 1 258 X 19643184 19643202 CCGAGATGGATAAGGAGCA 58 19643503 19643521 GAAATTCCCAGCCTCACCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG33932 FBgn0066303 FBtr0091936 2 1 1 68 X 19638705 19638796 AGACTTTAAGGCCCAGCAG 59 19638828 19638846 TGCAGAAAGATCTCGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG14207 FBgn0031037 FBtr0074733,FBtr0074734 1 2 2 80 X 19504644 19504734 CCAGAAGCTATTGGTGCAC 58 19504777 19504796 AGGAACTCCCGATTGTACTC 59 NA Drosophila melanogaster 61 CG7914 FBgn0030995 FBtr0074696 2 1 1 66 X 19087001 19087019 CAATACGTACACGAACCGC 59 19086953 19086971 GTGCAATAGCAACTCCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7556 FBgn0030990 FBtr0074697 1 1 1 88 X 19072141 19072159 AAGACCGAGGAAGAATTGC 57 19071994 19072089 CTCTTCTGGGAAGCTGGAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG42506 FBgn0260232 FBtr0300640 2 1 1 60 X 18881275 18898625 GGGAGTTTCAATAGAGATTCCA 57 18898645 18898664 AAGAAGTTTCCCAGTAACGC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG6961 FBgn0030959 FBtr0074660 2 1 1 106 X 18681945 18682026 TCGACAGAAAGTTCAATGCG 59 18681858 18681876 CTTTGCCGGCATATCAGAG 58 NA Drosophila melanogaster 61 Bx FBgn0000242 FBtr0074598,FBtr0074597,FBtr0074599 3 3 3 108 X 18461161 18461553 GACTACTTGAGATTGTTTGGC 57 18461621 18461641 ACTCCAAGTGATAGACATTGG 57 NA Drosophila melanogaster 61 por FBgn0004957 FBtr0074577 1 1 1 60 X 18272416 18272434 CAAACGGCGATTGAACTCC 59 18272374 18272394 CGTGAATGCCAGATTAGTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RhoGAP16F FBgn0030893 FBtr0074512,FBtr0074513 3 2 2 86 X 17990414 17990432 CTGCGCGAAATCAAGAGTC 59 17990480 17990562 CAGATCGGTTAACAACCACTG 59 NA Drosophila melanogaster 61 Arp14D FBgn0011742 FBtr0112868,FBtr0074295 1 2 2 80 X 16444493 16446388 CGATATCGAAGTCAAGGATCTG 58 16444434 16444452 TCCATCGGATAGGAGACCT 58 NA Drosophila melanogaster 61 CG34015 FBgn0054015 FBtr0100070 1 1 1 114 X 16341988 16342074 CGATTCTTTGGTGCAGCTC 59 16341892 16341910 CTTCACCGTGATAAACGGC 59 NA Drosophila melanogaster 61 CG4420 FBgn0030753 FBtr0074278 3 1 1 88 X 16337940 16337961 AGAATATCCAGGATAACATGGC 57 16338007 16338092 CACTTTGCAGTTGATATAGAGC 57 NA Drosophila melanogaster 61 CG32579 FBgn0052579 FBtr0074225 2 1 1 80 X 16217891 16217912 TGTCTATGTCCTAAACTATGCG 57 16217952 16218120 TGGTAATATTCGATCTCCGC 57 NA Drosophila melanogaster 61 Aats-arg FBgn0027093 FBtr0074178 1 1 1 80 X 15737937 15737955 GGACGTCGATCTTGTTCAG 58 15737812 15737895 TCAGCAATGGACTTCTTTAGG 58 NA Drosophila melanogaster 61 CG8097 FBgn0030660 FBtr0074047 1 1 1 80 X 15478603 15478624 GGTTAACAATTGTGCCTATGAG 57 15478665 15478746 TCCCAGTCAACATCATCCT 58 NA Drosophila melanogaster 61 CG9215 FBgn0030659 FBtr0074066 3 1 1 60 X 15475176 15475194 CTCTGTCAAGGAACTGGTC 57 15475134 15475154 CTTGGATTCGTCACAGAACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15642 FBgn0030642 FBtr0074076 1 1 1 60 X 15361418 15361436 TATGTGTCCATGGTGTGGG 59 15361291 15361394 AATGATGCAGGCGTATGAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG9164 FBgn0030634 FBtr0074013,FBtr0074012,FBtr0074014 1 3 3 80 X 15276621 15276641 CTCTCCATGAACAACATACCC 58 15276371 15276581 ACTATGAAAGCTGGGAAACTC 58 NA Nonspecific Drosophila melanogaster 61 HDAC6 FBgn0026428 FBtr0074009,FBtr0074010,FBtr0301774,FBtr0074008 3 4 4 108 X 15229293 15229393 TTCCAGAATGCTGTCAACAG 58 15229464 15229482 ACTCGTAGTGCTCCTTGTC 59 NA Drosophila melanogaster 61 CG5662 FBgn0030620 FBtr0073999 1 1 1 60 X 15104830 15104848 TTGGATGTCCGAGGATCAG 58 15104869 15104890 GACATTCTCCACATAGCTAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32601 FBgn0052601 FBtr0073914 2 1 1 98 X 14273640 14273658 GATTCGCTGGGAAGTTTCG 59 14273716 14273738 GGAATCATAGTAATCGGAGTAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11674 FBgn0030551 FBtr0073926 3 1 1 129 X 14119459 14119477 TGAGTTTCAGCAACAGTGC 59 14119287 14119367 CTCTAGACAGCTTGATTGCA 57 NA DesignRelaxed Drosophila melanogaster 61 Ste:CG33237 FBgn0053237 FBtr0300086 2 1 1 110 X 13953671 13953689 TCTGATACACAGCTGGACG 59 13953519 13953597 GAAAGCCTAGGTACGTGGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG11068 FBgn0030536 FBtr0073854 2 1 1 157 X 13849698 13849786 TATACGATTCGCAACGTCAC 58 13849906 13849924 CTTGTAGGACTCCAGGGTG 59 NA Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 2 1 1 84 X 13614370 13614454 CTAGGAACAGCGAACACGA 59 13614304 13614322 GATGTGGCCTTGATGTCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443,FBtr0073803 2 2 2 80 X 13471690 13474100 GCGTTGAGAAATACCTCACAG 59 13474139 13474160 CGCCGCCTATGAATATTAATGG 59 NA Drosophila melanogaster 61 CG34411 FBgn0085440 FBtr0300364 2 1 1 80 X 13060223 13061220 CAGCAATCTACAAGGATTACAC 57 13060164 13060182 AGGTTCTTCAAACAAGCGA 57 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0073661,FBtr0301830,FBtr0301831,FBtr0073659,FBtr0073660 1 5 5 72 X 12482043 12482063 GAAAGGTCTCAAATACGACGA 58 12481922 12482009 GCGTCCAATGATCTCACAC 59 NA DesignRelaxed Drosophila melanogaster 61 Amun FBgn0030328 FBtr0073615,FBtr0073618,FBtr0073619,FBtr0073617,FBtr0073616 2 5 5 61 X 11606812 11606830 TGATTTGGACGACGAAAGC 58 11606367 11606385 CTGTCTCCGATTCTGTAGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG33235 FBgn0030307 FBtr0073545 2 1 1 60 X 11383039 11383063 CGTACTTCCAATAATAAGAGTGTCC 59 11383003 11383023 CTTTGCTACCTTGATTACGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP5 FBgn0030301 FBtr0073500,FBtr0073499 1 2 2 88 X 11349145 11349163 GCCGCAAACTATTAATCCG 57 11349215 11349323 CCAGGAGGTCATTTACGTC 57 NA Drosophila melanogaster 61 CG1637 FBgn0030245 FBtr0073408 1 1 3 80 X 10767735 10771459 TGTCCTTTGGAGAAACCGT 59 10767673 10767693 CGAACTCACAGATTGATTCGT 58 NA Drosophila melanogaster 61 CG17333 FBgn0030239 FBtr0073379 2 1 1 82 X 10742266 10742403 CAGTGTCGTCAAGAGTGTG 58 10742449 10742467 ATGTCAACTGCCCTTTGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG2887 FBgn0030207 FBtr0071459 1 1 1 60 X 10371728 10371748 TTTATAATCCGGGACAAGCCA 59 10371688 10371706 TGTACAGCAGATTGTTGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32686 FBgn0052686 FBtr0071468,FBtr0302373 2 2 3 60 X 10268305 10268325 ACAATCATCCTTTAGATCGCC 58 10268265 10268284 CTTTACCTCCGCAATTTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15365 FBgn0030077 FBtr0071357 1 1 1 92 X 8950363 8950488 AATGAGAAAGACAAGGAGGTG 58 8950291 8950309 CAGCTTCAGTTGACACTCC 58 NA Drosophila melanogaster 61 Crag FBgn0025864 FBtr0071219,FBtr0071220,FBtr0301295 1 3 3 86 X 8488874 8488955 ACCTTCATCGAATGGTTCTG 58 8489004 8489022 GAAACGGTACTTCGTCCAG 58 NA Drosophila melanogaster 61 CG11190 FBgn0030035 FBtr0071175 2 1 1 96 X 8300892 8300911 TAGTGGTTCGTCCATTGTCC 59 8300607 8300836 TGGGTGTGGTAAAGATTATCCT 59 NA Drosophila melanogaster 61 sws FBgn0003656 FBtr0071126,FBtr0301675,FBtr0071125 2 3 3 80 X 7852239 7852317 TACGCCAACTAGAGGAGGT 59 7852177 7852199 AGGCTAGAGTCTTGTACTTATCG 59 NA Drosophila melanogaster 61 CG32720 FBgn0052720 FBtr0071082 2 1 1 80 X 7430034 7430053 CGAAACACAACGATCATGGA 59 7429760 7429991 CGTTTAACTGCTGGTTGGG 59 NA Drosophila melanogaster 61 CG11368 FBgn0040923 FBtr0071058 2 1 1 175 X 7346292 7346310 TCATTGGTCTGCTACTGGT 58 7346523 7346541 TTAACCGGTAGATGCAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 iav FBgn0086693 FBtr0070969 1 1 1 80 X 6709395 6709416 CTACAGTAACATCACCTGTTCC 58 6709454 6709532 GAATTCCAATTAGTCCTTCCGT 58 NA Drosophila melanogaster 61 CG34417 FBgn0085446 FBtr0112703 3 1 6 116 X 6435260 6435278 TACATACGTTGCTGCTCGT 59 6435358 6437141 TCCATGGCAGGAATGACTG 59 NA InUTR Drosophila melanogaster 61 CG33665 FBgn0053665 FBtr0302414 1 1 1 130 X 6372747 6372826 GATTCTTGACTACTCCGAAGC 58 6372637 6372656 TCTCTTGTCTGATATCGCGT 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG33667 FBgn0053667 FBtr0302416 2 1 1 73 X 6366276 6366355 GATTCTTGACTACTCCGAAGC 58 6366223 6366241 AACGGGAAAGCCAATTTGG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910,FBtr0070908 1 3 3 80 X 6261186 6261399 CTTTATCAACGCCCTGCAC 59 6261440 6261461 ACCTTGTACACATAGCTTTCGA 59 NA Drosophila melanogaster 61 CG15891 FBgn0029860 FBtr0100319 2 1 1 60 X 6187771 6187854 CATTACCACGGAACAGCTG 58 6187729 6187747 CTTCTTTCGCTCCTTGGTC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG42265 FBgn0259150 FBtr0299597,FBtr0299598 2 2 2 84 X 5549755 5549773 ACTATTGGTCGTCATGGGC 59 5549631 5549712 ATAGTACACCTCATAGAAAGAGGG 59 NA Drosophila melanogaster 61 CG15930 FBgn0029754 FBtr0301881 3 1 1 83 X 5210056 5210146 CCATTGATCTAAACTGGTTCTATCG 59 5209997 5210021 AGCCCTCTTTATAGAAATAGCTAGG 59 NA Drosophila melanogaster 61 Cbp80 FBgn0022942 FBtr0070683,FBtr0070684 1 2 2 80 X 4551096 4551186 TCAAGCTGAATACCGAATTGAG 58 4551227 4551245 AATCATCCTCCGAATCGCT 59 NA Drosophila melanogaster 61 pon FBgn0025739 FBtr0070681 1 1 1 108 X 4530940 4531152 ATCCATATGAGGTCGTCCG 58 4531224 4531242 ATCTCGAAGGGATTGAGCG 59 NA Drosophila melanogaster 61 CG2982 FBgn0029704 FBtr0070648 1 1 1 147 X 4213498 4213516 TTGTAACAGTAGGCACGTG 57 4213689 4213707 CTGTTGCCTTGAGACTTGG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2901 FBgn0029679 FBtr0070605 2 1 1 80 X 3724423 3724446 CTTTATCACAATCTGATGACTCCC 59 3724482 3724727 GTTCCATATGAAGCGTCTAGTG 59 NA Drosophila melanogaster 61 CG14270 FBgn0029665 FBtr0070590 1 1 1 60 X 3378989 3379008 GAACTTCAGAATCCCGTGTC 58 3378948 3378966 TTTGATTGATCGCCCTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10802 FBgn0029664 FBtr0070568 2 1 1 106 X 3377105 3377186 TTCCTGAAGGAGTTCAAGAC 57 3377255 3377273 CAGATCACATTGAAGCCCT 57 NA Drosophila melanogaster 61 CG17959 FBgn0029647 FBtr0070557 1 1 1 60 X 2841514 2841532 GATATAGCGGTGTCCGGAG 59 2841553 2841574 GGTATTAGGTAGTACTCCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dwg FBgn0000520 FBtr0070487 2 1 1 131 X 2622174 2622193 GAGAGTCAGACTCATAGCCC 59 2622287 2622586 TTCATCCAAATTGGCGACG 59 NA Drosophila melanogaster 61 CG13762 FBgn0040333 FBtr0300708 3 1 1 82 X 2517679 2517698 CGCTCAATAGCTATCCAGAG 57 2517536 2517636 GTAGTCAATCACCTTCATGCT 58 NA Drosophila melanogaster 61 CG9904 FBgn0040336 FBtr0070442 2 1 1 101 X 2515337 2515421 CCATAGTGGCCATTAGCAC 58 2515486 2515504 TGATTTGCACGCTATGCAG 59 NA Drosophila melanogaster 61 CG2865 FBgn0023526 FBtr0070408 3 1 1 179 X 2176545 2186370 AGAATCTGCCCAGAACCAG 59 2176384 2176402 ACGATGATCCGTTTGAGGA 58 NA Drosophila melanogaster 61 csw FBgn0000382 FBtr0070378,FBtr0070379,FBtr0070380 2 3 3 80 X 2003619 2003766 GCAACATATTGCCATACGAC 57 2003809 2003827 CATTGATGTACTCGGCTCC 58 NA Drosophila melanogaster 61 CG11417 FBgn0024364 FBtr0070212 1 1 1 60 X 1248603 1248622 ATAGTTCCGAGGTGTCACAG 59 1248645 1248663 GCGTAGTCTATCTCTGGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14626 FBgn0040360 FBtr0070200 1 1 1 146 X 1081152 1081894 CTCTATGTTGGTCCCACAG 57 1082002 1082022 ACTGGTTACATATGGAATGGG 57 NA Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 1 1 1 76 X 1065657 1065675 TGGATCCTAGCCAACTTGG 59 1065715 1065850 CTCGATGCTAACGTTCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13366 FBgn0025633 FBtr0070161,FBtr0110791 2 2 2 90 X 506057 506133 CATGAGAGCATTCGGTTGC 59 505985 506004 AAGTATTGGTTCCCTGTCCG 59 NA Drosophila melanogaster 61 CR40734 FBgn0085770 FBtr0114220 1 1 1 60 U 9837027 9837045 TTCAGGATACCTTCGGGAC 58 9836985 9837006 CTTGCACATATGTTAGACTCCT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41497 FBgn0085658 FBtr0114103 3 1 1 60 U 1683932 1683951 CATCAATTTGGTTGGCAGGA 59 1683891 1683910 TGTTGCATGATAGCTGTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rad23 FBgn0026777 FBtr0089121,FBtr0089122 3 2 2 96 4 330248 330328 GTATTGCAGCAGATTGGTCAG 59 330384 330404 GGTCAATCGGTTGATTAAGCA 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 1 7 7 80 4 208670 208694 GGGTATTTAAGACATATACACTCCC 58 207458 208634 CATTTCCACCTTATGACCTCC 58 NA Drosophila melanogaster 61 CR31044 FBgn0051044 FBtr0085391 1 1 1 60 3R 25041461 25041479 CAAAGGGACAAACAGGTGG 59 25041500 25041521 TTGACTAATTACCTTGCGTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tre-2 FBgn0084688 FBtr0113491 3 1 1 60 3R 12589809 12589829 CATAACTGTCGTTCGTAATGG 57 12589769 12589787 GCAAACGATTATGAGGCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pasha FBgn0039861 FBtr0085820 1 1 1 98 3R 27444484 27444973 TGAGTCAGACAACGCTAGC 59 27445034 27445053 GAATCGTATTCTTCGCCGTC 59 NA Drosophila melanogaster 61 CG11333 FBgn0039850 FBtr0085789 1 1 1 131 3R 27289196 27289271 CTACTAAACTGCTGGCAGC 58 27289364 27289384 TGGTCTTGGAAATATTGGCAC 59 NA Drosophila melanogaster 61 Bet5 FBgn0260860 FBtr0085570 1 1 1 93 3R 26006361 26006533 CCTCTGGATTAAAGTTCGTTCTC 59 26006586 26006604 AACTCTACCCACACCTTGG 59 NA Drosophila melanogaster 61 Tpi FBgn0086355 FBtr0085583 3 1 3 98 3R 25959808 25959982 GAACTTCGAGTTCTACGCC 58 25959728 25959746 TTCATCTTCCAGTTGCCTC 57 NA InUTR Drosophila melanogaster 61 janA FBgn0001280 FBtr0085595,FBtr0085597,FBtr0085596 1 3 3 79 3R 25864677 25864801 GTCTACGGATACTCGCAGG 59 25864616 25864634 TAGTCCGGGTATTTGGTGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG11504 FBgn0039733 FBtr0085548,FBtr0085547,FBtr0085549 3 3 3 60 3R 25824138 25824156 ATGACTTGCGACGAGTACC 59 25824180 25824198 GGCTGACTTCGTTCAAGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7896 FBgn0039728 FBtr0085545 2 1 1 86 3R 25812887 25812972 TCGAATATGCTACAGCAATTGG 59 25813019 25813037 GGTTATGGTGTTGCGACTG 59 NA Drosophila melanogaster 61 CG15517 FBgn0039718 FBtr0085515 1 1 1 81 3R 25729266 25729345 ATAGTACCGTCTGCCTCAC 58 25729203 25729223 ACCGAATTTCCATCCATTGTG 59 NA Drosophila melanogaster 61 Cad99C FBgn0039709 FBtr0085488 1 1 1 84 3R 25678842 25678925 GTTCACAAGGTCAAAGCCG 59 25678967 25678991 GGATGAGTATAACAAGTGATATGGC 59 NA Drosophila melanogaster 61 CG1969 FBgn0039690 FBtr0085475 2 1 2 132 3R 25566134 25566304 AACTTACGGAGGAGACATATCTG 59 25566396 25566414 AGAGGACGCACTTTCATCC 59 NA Drosophila melanogaster 61 CAP-D2 FBgn0039680 FBtr0085452 1 1 1 80 3R 25503267 25503344 CGGGAAATCAGAATATGAGTTCC 59 25503381 25503402 GGTGATATGTCTTTAGCAAGGC 59 NA Drosophila melanogaster 61 CG2010 FBgn0039667 FBtr0085428,FBtr0085427 1 2 2 115 3R 25323847 25323865 TTTATACAGCGCCAGGGTC 59 25323943 25324030 ACAATGATCTTGCAGTTGCC 59 NA Drosophila melanogaster 61 Ef1gamma FBgn0029176 FBtr0085392,FBtr0085393,FBtr0302442 3 3 3 144 3R 25046021 25046162 GGTGAAAGGAACTCTGTACAC 58 25046268 25046286 CTTCTTGAGGAACTCAGCC 57 NA Drosophila melanogaster 61 CG14528 FBgn0039611 FBtr0085329 1 1 1 60 3R 24702603 24702622 GCATCTGAACATCAACTCCT 58 24702640 24702663 GAACACCTCTCCATATACATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9988 FBgn0039591 FBtr0085305 2 1 1 80 3R 24462887 24462906 GTAGAACTATGCCGAAGGTC 57 24462946 24463022 TGTCGCCTATCTTATTGTATCC 57 NA Drosophila melanogaster 61 CG4849 FBgn0039566 FBtr0085257 2 1 1 89 3R 23790243 23790322 CATAAACAAGATTGATCGCCTC 58 23790371 23790390 TTGACTTCCTCCACAATGTG 58 NA Drosophila melanogaster 61 CG31253 FBgn0051253 FBtr0085263 1 1 1 60 3R 23785799 23785817 CCACAACAACTTCGAGTCC 58 23785757 23785778 GTACTGTCTGAATTGCTTTCTG 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4951 FBgn0039563 FBtr0085265,FBtr0113298 1 2 2 87 3R 23779656 23779732 TTATACCAGTACAAGAAGCACC 58 23779590 23779608 CATTCTTGGATTCCCGCTC 58 NA Drosophila melanogaster 61 CG5611 FBgn0039531 FBtr0085199 1 1 1 94 3R 23460813 23460895 CAAGAACTCTGAAATAAAGGGC 57 23460740 23460758 TTTCGATCTCGATTTCGGC 58 NA Nonspecific Drosophila melanogaster 61 wdb FBgn0027492 FBtr0085204,FBtr0085209,FBtr0085208,FBtr0085203,FBtr0085207 1 5 5 80 3R 23392369 23392389 GCGATTCATTTACGAAACGGA 59 23392245 23392329 GCGAATCCGTTGATGATACTG 59 NA Drosophila melanogaster 61 bigmax FBgn0039509 FBtr0085173 1 1 1 98 3R 23113569 23113589 GCTATGAGAACATGCTACAGC 59 23113426 23113509 CCATAATGGCCTGGAACAC 58 NA Drosophila melanogaster 61 Tsp97E FBgn0039465 FBtr0273310,FBtr0273309 3 2 3 108 3R 22788799 22788894 TTCAGCTTCACTGAGTTCG 57 22788709 22788733 CTCTCGACTAGCTTCTAATTTAGAG 58 NA InUTR Drosophila melanogaster 61 Tl FBgn0003717 FBtr0085060 2 1 2 75 3R 22652406 22653007 AGTTCTGAGCAAGGAGGAG 58 22653046 22653064 TTCCTTATGCAACACAGCG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14246 FBgn0040608 FBtr0100441 3 1 1 164 3R 22553425 22555495 TCAAAGGGAGAGCCATGTC 59 22555623 22555641 GTTCCCAATCCCTATCCCG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14244 FBgn0040607 FBtr0085040 2 1 1 77 3R 22552059 22552077 AGCGTTATTGTTTGGACCC 58 22552118 22552136 GCTGGCACTTATGAAGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 amon FBgn0023179 FBtr0085048 1 1 1 89 3R 22526452 22526542 GTCAATGAGGGTCGAAATGG 59 22526382 22526400 GTAGCCGTCACAATTGCAG 59 NA Drosophila melanogaster 61 CG14238 FBgn0039429 FBtr0085014 3 1 1 86 3R 22285269 22285287 CTCATGCAGTTCACCATCG 59 22285335 22285418 GTCTGTATGTTCCTCCTTGTG 58 NA Drosophila melanogaster 61 CG14239 FBgn0039424 FBtr0113295 1 1 1 80 3R 22228894 22228969 ATAACAAGTTTGGGCGTTGAC 59 22228834 22228853 AGCAGGAAAGAGAAGGATCG 59 NA Drosophila melanogaster 61 CG11910 FBgn0039332 FBtr0084846 2 1 1 60 3R 21207043 21207064 ATGAGATCAAGACATTCACCGA 59 21207004 21207023 AACATGCGATAGACCTTGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11889 FBgn0039308 FBtr0100614 3 1 1 79 3R 21097005 21097081 TTATGCTGTGTTTGCGTCG 59 21097124 21097142 TGAACTGCTCTATGGACGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG13650 FBgn0039277 FBtr0113286 1 1 1 80 3R 20936659 20936681 CTTCGTGTCATATGCTCAAAGAG 59 20936538 20936621 TCAACTTGCAGCTTGTTTAGG 59 NA Drosophila melanogaster 61 CG31111 FBgn0051111 FBtr0084790 2 1 1 94 3R 20881597 20881766 TTATCTACTGGAGAACGCCG 59 20881522 20881545 GCTCTATCAAGTAAAGTCTTTGGG 59 NA Drosophila melanogaster 61 Smg6 FBgn0039260 FBtr0084796 2 1 1 80 3R 20855836 20856093 CCAAAGGCAATGTGAAATGTG 59 20855776 20855797 AATATTCCTCCTCAACTAGGGC 59 NA Drosophila melanogaster 61 asp FBgn0000140 FBtr0084692 1 1 1 90 3R 20585536 20585554 GTGCGACAAAGACAGTGAG 59 20585607 20585690 GTCGTGAATGATCTTTCGCT 58 NA Drosophila melanogaster 61 Syx18 FBgn0039212 FBtr0084670 1 1 1 70 3R 20450225 20450245 AAAGAACGTGGTAGACATTGC 59 20449856 20449874 TATTGTGCTGTTGCATGGC 59 NA DesignNoJunction Drosophila melanogaster 61 Dis3 FBgn0039183 FBtr0084605 1 1 1 80 3R 20159526 20159546 CAAGCGATTCAATGAGATCGT 59 20159587 20159658 GCATAGGTTTCCTTGTGGTG 59 NA Drosophila melanogaster 61 BRWD3 FBgn0011785 FBtr0084604 1 1 1 84 3R 20146561 20146579 TTAAGGGACTACTGCACCC 58 20146626 20146706 GAACGCGATCTAAGTTGTGG 59 NA Drosophila melanogaster 61 Orct FBgn0019952 FBtr0084599 2 1 1 60 3R 20103775 20103793 TTATGATCTCTGGTGCCGT 58 20103817 20103835 CGGTTCAAAGTGAAGAGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mask FBgn0043884 FBtr0084563,FBtr0084562 3 2 2 80 3R 20062223 20062550 CGAATTGGCTCAGGTTCTC 58 20062593 20062612 TCCATTAAAGGCGTTGAGTC 58 NA Drosophila melanogaster 61 Mpk2 FBgn0015765 FBtr0084580 3 1 3 91 3R 19977631 19977649 CGGAATGGAGTAATAGCGC 58 19977458 19977577 TTAATGGTGCCTCTGTTCCA 59 NA InUTR Drosophila melanogaster 61 Tsc1 FBgn0026317 FBtr0084546 2 1 1 81 3R 19956790 19956869 CTTATGACGCACGAGAAGG 58 19956914 19956932 AATTCGGTATGATCGGCAG 57 NA Drosophila melanogaster 61 CG31141 FBgn0051141 FBtr0084490 2 1 1 93 3R 19749235 19749255 CGAGAACCTTATAATCTGCGA 57 19749310 19749387 TGAAGTAGTATCCGGGCAG 58 NA Drosophila melanogaster 61 RpS3 FBgn0002622 FBtr0084410 2 1 1 60 3R 19184599 19184880 CCAAGAAACGCAAGTTCGT 59 19184901 19184922 GTCAGGAACTCGTTCAATTCAG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13837 FBgn0039042 FBtr0084345 2 1 1 60 3R 18869888 18869908 CTTGGATGGTCATTACTACGA 57 18869930 18869948 CGACACCAACTTTCGATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34375 FBgn0085404 FBtr0112607,FBtr0302319 2 2 2 146 3R 18828725 18832324 GCCTTGAGGTCATCAAACC 58 18828597 18828615 TGAACAGTTTGTCCGACAG 58 NA Drosophila melanogaster 61 CG4704 FBgn0039029 FBtr0084314 1 1 1 80 3R 18670517 18670535 TGAAGTTTCTACACGCCCT 59 18670399 18670473 AGATCACCGAACTGGACTC 58 NA Drosophila melanogaster 61 CG7023 FBgn0039025 FBtr0084311 2 1 1 296 3R 18592406 18592425 CAATCATCACCAGACAACGG 59 18600706 18600724 ACAGATCGGAGCCAATCTC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 lqfR FBgn0261279 FBtr0299515,FBtr0299516 1 2 2 80 3R 18239119 18239142 ATGATGATACTCACTACGATGGAG 59 18239175 18239261 CATTGTATCGATAGTTACGTCTTGG 59 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 1 3 3 80 3R 18217578 18217653 CATTGAGGGAATCTCCAACG 58 18217693 18217714 TTCAAATCGAACTCATAGACGC 59 NA Drosophila melanogaster 61 ND42 FBgn0019957 FBtr0084173,FBtr0084172 1 2 2 109 3R 17854856 17854942 GATGTCTGGTTCAATGCTCC 59 17855014 17855032 TAGATGCCCTGGTTGATGC 59 NA Drosophila melanogaster 61 CG17819 FBgn0038915 FBtr0084152 2 1 1 80 3R 17710672 17710692 TATATCGCCTAACTGGTCGAG 59 17710555 17710633 AATTTACGATCTCCTGAACACC 58 NA Drosophila melanogaster 61 Gr93a FBgn0041229 FBtr0084133 3 1 1 175 3R 17659327 17659345 GAAGTGGTCTTTGTGTCCA 57 17659482 17659563 CCGAGAAATGTTTCAACACTC 57 NA Drosophila melanogaster 61 CG3308 FBgn0038877 FBtr0084102 1 1 1 80 3R 17098143 17098216 CTAGACAAATTCGAGAATCTTCCG 59 17098086 17098105 GTCTAGGTACTTAAGCGCCT 59 NA Drosophila melanogaster 61 TotX FBgn0044810 FBtr0083985 2 1 1 63 3R 16731158 16731178 CGTGTTCTTAGGCATAGTTCC 58 16731115 16731136 GTGTTCCTCATAACTTGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 TotX FBgn0044810 FBtr0083985 1 1 1 62 3R 16731157 16731177 GTGTTCTTAGGCATAGTTCCT 57 16731115 16731136 GTGTTCCTCATAACTTGAACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5180 FBgn0043457 FBtr0083903,FBtr0273268 2 2 2 128 3R 16384799 16384817 CAAATGGTAGCCCATGCAG 59 16384907 16384991 ATTGACCGCTTGTTGTATCTC 58 NA Drosophila melanogaster 61 CG4433 FBgn0038763 FBtr0083843,FBtr0083842 3 2 2 86 3R 15845003 15845021 GGACTCGATCAATGTGGTC 58 15844874 15844953 TTCAGTATGCACCAATGCG 58 NA Drosophila melanogaster 61 MED25 FBgn0038760 FBtr0083825 3 1 1 60 3R 15835006 15835024 TTGTTCAACCTATGGTCCC 57 15835047 15835066 CAATCTTTCGATCGTCTCCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hs6st FBgn0038755 FBtr0083846 1 1 1 80 3R 15763020 15763040 ATCGAGAAGCTAAACAGTCTG 57 15756239 15762978 CTTCAGATGTTCGAAACGC 57 NA Drosophila melanogaster 61 CG6195 FBgn0038723 FBtr0083803 2 1 1 82 3R 15472849 15472948 TGATTCTGAGAAAGGGCGT 59 15472785 15472803 CAGGGCATACTTGAACTGC 58 NA Drosophila melanogaster 61 Nup58 FBgn0038722 FBtr0083781 3 1 1 93 3R 15471729 15471747 ATCGACTTTCGTGGGTCTG 59 15471801 15471883 GGTTTCCTTAATCTTGATGCCA 59 NA Drosophila melanogaster 61 CG42358 FBgn0259704 FBtr0299957 3 1 1 192 3R 14986379 14986460 CCTTGAACCTAACACCCGA 59 14986205 14986223 CGTTTGACGTTCGGAAAGG 59 NA Drosophila melanogaster 61 CG14300 FBgn0038643 FBtr0100288 2 1 1 122 3R 14519307 14519387 TGAAGTCTGTTGTTGCCCT 59 14519203 14519222 GATGCGTATAGGTCTGTCCA 59 NA Drosophila melanogaster 61 CstF-64 FBgn0027841 FBtr0083660 3 1 1 122 3R 14485550 14485632 GTCTTGTCACTGAAACTGGT 58 14485713 14485735 GATCTCATAGCCATTCAGATTCC 58 NA Drosophila melanogaster 61 CG31224 FBgn0051224 FBtr0083691 3 1 1 98 3R 14478940 14479022 GAGTGAGTCGGTTTATGGG 57 14478860 14478878 TGAGCCGGATAATAGTCCT 57 NA Drosophila melanogaster 61 CG14306 FBgn0038628 FBtr0113245 2 1 1 100 3R 14416863 14416881 GTTTGTGGCGTCCAATCTG 59 14416941 14417573 GACGATGATTGTCTTCTTCAGAG 59 NA Drosophila melanogaster 61 CG18600 FBgn0038601 FBtr0083594 1 1 1 88 3R 14126691 14126709 AGTTTGATCCCGAGCTCTC 59 14126564 14126643 GATTTAATGGGTAGAGTCTGCAC 59 NA Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0083554,FBtr0290320 3 4 7 115 3R 13997409 14001058 CATTCCGCTAAACGAGAAGAC 59 14001135 14001153 TGAACTTGAGGTCGCTGAG 59 NA Drosophila melanogaster 61 CG18012 FBgn0038552 FBtr0083523 3 1 1 94 3R 13635512 13635589 ATTTCAAGTGCCTGGATGAG 58 13635437 13635455 GAACCAAATCCTCAGCTGC 59 NA Nonspecific Drosophila melanogaster 61 sll FBgn0038524 FBtr0083462 3 1 1 81 3R 13433389 13433660 CATTTGCTACAGAGCATCCT 58 13433701 13433722 TAGATAAACAATTGTCCGACCG 58 NA Drosophila melanogaster 61 CG14332 FBgn0038509 FBtr0083446 2 1 1 60 3R 13247828 13247846 GATCGTATTTGTCGTCGGT 57 13247786 13247805 ATAGCTCCAGACTGATGCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5319 FBgn0038501 FBtr0083435 1 1 1 80 3R 13213138 13213221 AGAGTTCGACATCGATCCC 59 13213262 13213283 ATAGCATAGAATACGGAACTGC 58 NA Drosophila melanogaster 61 CG31269 FBgn0051269 FBtr0113401 1 1 1 75 3R 12953522 12953540 AATGGTTACCTGGTGGGAC 59 12953718 12953736 AAACACTGGCATGAACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12783 FBgn0038448 FBtr0089666 1 1 1 89 3R 12437767 12437855 TTGGACGTGGTCTGTAGTG 59 12437696 12437716 CCAGGATATGTTGTACAGCAC 58 NA Drosophila melanogaster 61 CG42232 FBgn0250754 FBtr0290134 1 1 1 81 3R 12292238 12292257 AATAGGGAACTTCAGGTGGA 58 12292099 12292197 ATTTGCTATCATCTTCGGAACC 59 NA Drosophila melanogaster 61 CG10264 FBgn0038394 FBtr0083222 1 1 1 74 3R 11869429 11869447 ACTCGCGAAATTGTCAACG 59 11869698 11869716 ATTAGAGCGTTTGCACGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5614 FBgn0038359 FBtr0083171 1 1 1 60 3R 11605955 11605975 ACAAAGTCTACACATCACACC 58 11605995 11606015 CATAACTAGTTGAGCCAGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5213 FBgn0038345 FBtr0083148 1 1 1 60 3R 11321189 11321208 GGACAAGCGTAAATCTTCCC 59 11321231 11321249 ATGATGATCGTTCGTCCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tm1 FBgn0003721 FBtr0089963 3 1 13 63 3R 11112233 11112251 GATCTCAGCAGGTAAAGCG 58 11112276 11113055 GTTAGTTTCGCTTGTGGATCC 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 MRG15 FBgn0027378 FBtr0083125 2 1 1 177 3R 11103270 11103347 ATAATAAGAAAGGCAGCGCC 58 11103112 11103130 TTAGTAGTCGTGGTGCCAG 59 NA Drosophila melanogaster 61 Oscp FBgn0016691 FBtr0083064,FBtr0083063 1 2 2 92 3R 11092082 11092163 GTGCCCTTAAGTCTTTCCTG 58 11092218 11092236 CAATGGAAACGATCAGGCC 59 NA Drosophila melanogaster 61 dpr9 FBgn0038282 FBtr0089376 2 1 1 88 3R 10889052 10892325 ATAAGACGATGTTGCTTCAGG 58 10888984 10889002 CTGATCCGACGTGTATGTG 58 NA Drosophila melanogaster 61 CG9297 FBgn0038181 FBtr0082828,FBtr0082827 2 2 2 80 3R 9600883 9600961 TAAATCACGAGGATGAAGACC 57 9601002 9601021 TTACTTTGCCATCTCCATCC 57 NA Drosophila melanogaster 61 ninaB FBgn0002937 FBtr0082820 3 1 1 91 3R 9527223 9527243 ACGGATAACTCGATGATTTCC 58 9527294 9527371 GTGCAGGGATTTATTCTATGC 57 NA Drosophila melanogaster 61 CG5724 FBgn0038082 FBtr0082657 1 1 1 122 3R 8566068 8566155 TTGTACAAGGAATTGTTCGGTG 59 8566238 8566256 AACATTTGGTCGGATGGGA 59 NA Drosophila melanogaster 61 CG11598 FBgn0038067 FBtr0110781 1 1 1 82 3R 8460685 8460760 CCAAGGGACTAATTACATCCG 58 8460804 8460822 ATACCCATCTCGTGTGAGC 59 NA Drosophila melanogaster 61 CG17207 FBgn0038051 FBtr0082682 3 1 1 60 3R 8264450 8264468 AACCTCGCCAAGTACTTCC 59 8264408 8264428 TCAGCATTATGACCATCAAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18547 FBgn0037973 FBtr0082506 2 1 1 80 3R 7805237 7805312 GGAAGACTCGATACGGTCC 59 7805175 7805196 CTTGAAGAAATCCAGGTACTCC 58 NA Drosophila melanogaster 61 aur FBgn0000147 FBtr0082483 3 1 1 133 3R 7789113 7789195 CTATTGGGAAAGAAGCCCA 57 7789292 7789310 AAGTTGTTTCCTTCGGAGG 57 NA Drosophila melanogaster 61 mus309 FBgn0002906 FBtr0082434 1 1 1 80 3R 7564975 7564994 TGACCATTGTTATCAGTCCG 57 7564851 7564934 TCTTTGCACAGATATCTAGGG 57 NA Drosophila melanogaster 61 CG14720 FBgn0037940 FBtr0082428 2 1 1 60 3R 7537632 7537650 TGTTACCTCGGGCTATGTG 59 7537674 7537692 TATCTCCGTGGAGTTGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fer3 FBgn0037937 FBtr0082435 1 1 1 71 3R 7519832 7519850 ATACCAAGAGCTCATCGCC 59 7519713 7519731 AAAGGAGTTACTTGCGAGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG5270 FBgn0037897 FBtr0082387 1 1 1 80 3R 7254515 7254534 AGTTCTTGGACAAGTGTGAG 57 7254575 7254656 CTAGTCGAATCTGCTTCAGAG 58 NA Drosophila melanogaster 61 CG6693 FBgn0037878 FBtr0082367 1 1 1 60 3R 7046661 7046679 TTCATGAAGGTGGAGGACG 59 7046619 7046637 CGCTGGCAATCATATCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fdh FBgn0011768 FBtr0082290 1 1 1 85 3R 6698035 6698053 CTCCATTCGCCAATTGGAC 59 6697899 6697986 TGTGATAACCTTGCCCTCG 59 NA InUTR Drosophila melanogaster 61 CG6574 FBgn0037846 FBtr0082297 1 1 1 80 3R 6687490 6687512 CTTCCCAACTTATGCTCAATCTG 59 6687374 6687451 TGGCTATAATCTGAGTGCCC 59 NA Drosophila melanogaster 61 CG18545 FBgn0037812 FBtr0082234 3 1 1 60 3R 6167198 6167216 CGGCTCCAATCATATTGCG 59 6167239 6167258 GCACTAGTCCAAACACTAGC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Timp FBgn0025879 FBtr0082245,FBtr0082244 3 2 2 81 3R 6030866 6030884 CCTTCGCAAATCGGATACC 58 6030696 6030822 TTCGGATGTAGCCTTGTAGG 59 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 1 5 5 80 3R 6041341 6042794 GGTGGATGAGATATCCGAGC 59 6042836 6042855 TACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 Npc2d FBgn0037782 FBtr0082202 1 1 1 80 3R 5881635 5881723 ACATCTGTGAAGAAATGTTCCG 59 5881576 5881594 CTGACAGGGTGGAGTAACG 59 NA Drosophila melanogaster 61 CG12807 FBgn0037772 FBtr0082171 1 1 1 80 3R 5825466 5825561 ACAAACGACTTGCAGAATATGG 59 5825656 5825674 CTTCTCCTCAGTCATGGGC 59 NA Drosophila melanogaster 61 CG12945 FBgn0037755 FBtr0113214 2 1 1 81 3R 5616085 5616106 TTTCAATTGTACTAGGAGGCGT 59 5615971 5616049 CTATCGATGTCTAATTCTCTGTTGC 59 NA Drosophila melanogaster 61 CG8500 FBgn0037754 FBtr0082139 3 1 1 131 3R 5611789 5611865 CGTACAGACAGGTCATAAGC 58 5611959 5611977 AGTAGACCAGGATGAAGGC 58 NA Drosophila melanogaster 61 by FBgn0000244 FBtr0302382 1 1 3 114 3R 5354672 5354990 CATAATTCCAGGCACTGGA 57 5354576 5354596 GCTCATTATATCGCAAGACAC 57 NA InUTR Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 2 3 3 95 3R 4184857 4184932 GGCTGCTAACGATATGAACG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 Tom34 FBgn0010812 FBtr0081788 2 1 1 80 3R 3860592 3860669 GGCCAGAGAAGGAATACTG 57 3860713 3860731 CACTCACATGATACTCGCT 57 NA Drosophila melanogaster 61 ImpE3 FBgn0001255 FBtr0081819 1 1 1 60 3R 3854487 3854505 CCTGCTGGTTTACGATCTG 58 3854445 3854463 CTCGTACTTGCTCAGACTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lds FBgn0002542 FBtr0081758 1 1 1 93 3R 3747547 3747866 AATCGCTAAAGGACCTCCA 58 3747921 3747941 TTCATAAGCGATACCTTCAGG 57 NA Drosophila melanogaster 61 CG31472 FBgn0051472 FBtr0081747 3 1 2 131 3R 3636381 3636463 CCTTGAATAATGAAGTTGCTGC 58 3636619 3636640 CTTCACCTTGATGTTATCCTCC 58 NA InUTR Drosophila melanogaster 61 CG2616 FBgn0037512 FBtr0081738 2 1 1 101 3R 3548853 3548871 TTTCGTGGCCTATGAACAG 57 3548934 3549433 TTGGTATCCCTGATTTCAAGG 57 NA Drosophila melanogaster 61 Ubc84D FBgn0017456 FBtr0081552 1 1 1 60 3R 3344909 3344927 CGCATCGAAATCAACTTCC 57 3344867 3344888 TCTTGAATAGGATCTTTGGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spase18-21 FBgn0026567 FBtr0081687 3 1 1 228 3R 2484110 2484128 ACATACCCATTGTACACCG 57 2484895 2484974 AGAATGGCCCACTTAACCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 1 5 5 84 3R 2216804 2216890 GCATCAAGGCTGTCTTTGAG 59 2216739 2216757 TTCGTGTAGTTGTCCAGCT 59 NA Drosophila melanogaster 61 TfIIFalpha FBgn0010282 FBtr0081719 3 1 1 139 3R 2207861 2207880 AAGATGAACAGCTTACCCAG 57 2207982 2208058 CCGTAGTCCTCTACTTTGC 57 NA Drosophila melanogaster 61 Obp83cd FBgn0046878 FBtr0078584 1 1 1 116 3R 1933951 1934032 CTTTCGTTGAACGAAGGCC 59 1934109 1934130 CTTGAATCGTTCTAGACGTTCG 59 NA Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 2 2 2 95 3R 1476893 1476979 CAGTTGATTCGTCTGTGCC 59 1477038 1477056 GAATTGCGGGAATAGGCTG 59 NA Drosophila melanogaster 61 7B2 FBgn0041707 FBtr0078789 2 1 2 80 3R 1202657 1202738 TTGTTCCGTTCGCAAAGTG 59 1202782 1202800 GCTATAGGACTGCACCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG11999 FBgn0037312 FBtr0078807 3 1 1 143 3R 1180311 1180329 ACTTCTTACAGGACTGGCG 59 1180059 1180077 GATCCGTACTTGACGTCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823,FBtr0078822 3 2 2 141 3R 1064105 1064184 TGCTTACAAGGCCATTAAGGA 59 1063984 1064002 ATTTCCCTTCGGCAGATCC 59 NA Drosophila melanogaster 61 opa FBgn0003002 FBtr0078836 1 1 1 68 3R 693992 694010 TAAGTCCTACACGCATCCC 58 694182 694200 CTCTTCTCGTCCACATTGC 58 NA DesignNoJunction Drosophila melanogaster 61 eIF3-S10 FBgn0037249 FBtr0078944 2 1 1 84 3R 259310 259428 GGCTAATGAGTTCATTGAAGTG 57 259247 259266 ATAGTTCCATCGCTTGTTCC 58 NA Drosophila melanogaster 61 CG31528 FBgn0051528 FBtr0078923 1 1 1 60 3R 243220 243238 CGCTCTGCTCATATCTCTG 57 243261 243280 ATTCCAGTGGTCCAGTAGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9780 FBgn0037230 FBtr0078959 3 1 1 86 3R 119077 119482 CTTGATGGACATCGTAGATGC 59 119011 119030 GTAACACGTTGCACTACGTG 59 NA Drosophila melanogaster 61 pncr009:3L FBgn0062928 FBtr0091951 2 1 1 81 3L 19480817 19480836 GGTGGACTAAATGCGATGAC 59 19480330 19480777 GCATATTGGACTAATCTACCCAC 58 NA Drosophila melanogaster 61 CG12768 FBgn0037206 FBtr0078560 1 1 1 148 3L 22905320 22906368 ATTCGGGAACGCAAATCTC 58 22906480 22906498 TGATATTCGTCTAGGGCCG 58 NA Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 2 1 1 102 3L 22680160 22680178 TAAGGAGGTCATCCGAAGC 58 22680011 22680029 AATGCTCGTGAGGATGACC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7448 FBgn0037143 FBtr0078474 1 1 2 80 3L 21944185 21944259 CACGGATGAAGGTAATGTACC 58 21944300 21944319 TCGGAGGTGAAGAAGTACAG 58 NA Drosophila melanogaster 61 CG14563 FBgn0037139 FBtr0078444 2 1 1 100 3L 21835173 21835193 CCTATGGAGGATATCCCTACG 58 21835013 21835031 GTAGTATCCGCTTCCACCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7145 FBgn0037138 FBtr0078446,FBtr0078447,FBtr0078445 1 3 3 80 3L 21830926 21830944 GAGACCATGAAACTGGTGC 58 21830811 21830882 CTTGACGAAATCCTCGTCC 58 NA Drosophila melanogaster 61 Nopp140 FBgn0037137 FBtr0089580 2 1 2 60 3L 21827896 21827917 GTACAACAACTTCGTCAAATCG 58 21828572 21828593 GTTGTTGTGCTTCTTAAAGTCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 2 3 3 80 3L 21414616 21417562 TACATCAAGGTGGAGAGTGTC 59 21414556 21414574 CTGGACACGAATCTTGTGG 58 NA Drosophila melanogaster 61 CG7324 FBgn0037074 FBtr0078404 1 1 1 80 3L 21334515 21334535 GTTTGCTCATATCGTGGACAG 59 21334380 21334476 CGACTCAAAGGAACATGAACTC 59 NA Drosophila melanogaster 61 Sin FBgn0028402 FBtr0078288 1 1 2 96 3L 21024936 21024954 ATATTTAGGCGTGCACCGT 59 21025013 21025091 AATACGGGAATCTCCTCCAC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CSN3 FBgn0027055 FBtr0078269 3 1 1 115 3L 20833659 20833679 TGTACTTCTTCGAAGTCTGCA 59 20833493 20833583 ATACGCTATCTTGCCTTCGA 59 NA Drosophila melanogaster 61 Spc105R FBgn0037025 FBtr0078255 1 1 1 80 3L 20798951 20799034 GTGCAAGCTAAGAACAGAAGAG 59 20799074 20799093 TCGGTTAGCAAACGTTTGAG 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0113436 1 1 5 107 3L 20491483 20491501 GATGATATGCCAGATGCGC 59 20503137 20503155 CATTAGCTCGACGTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0078204 3 1 5 161 3L 20503000 20503018 TTCATTTGGAAAGCCCACG 59 20503212 20503230 AATCTTAAGAGGTTCGGCG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5585 FBgn0036973 FBtr0078242 3 1 1 80 3L 20340761 20340780 TTGCCAAGATTATTTCGGCC 59 20340646 20340721 AAGCTGAAAGTAACTTGTGACC 59 NA Drosophila melanogaster 61 Clc FBgn0024814 FBtr0074830 2 1 3 127 3L 20235767 20235902 GAGAGCACATAGCCATGGA 59 20235993 20236011 AGATCCACCCGTAATCTCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG17233 FBgn0036958 FBtr0302113,FBtr0074851 1 2 3 253 3L 20233188 20233206 TGCCTCGAACTATTACGGG 59 20231001 20232971 TCACCTCCTCCACTTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG7335 FBgn0036941 FBtr0074865 2 1 1 60 3L 20125903 20125921 CACCTACCAGCAGTTTGTG 58 20125861 20125879 TTCGAAGTGTATCCACGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Nca FBgn0013303 FBtr0302048,FBtr0074902 3 2 2 95 3L 19989982 19990001 CTTAAGGACTGCCCTAGTGG 59 19990059 19990139 CTCTGCAAACTTGCTAGCG 59 NA Drosophila melanogaster 61 RhoGDI FBgn0036921 FBtr0074896 1 1 1 107 3L 19924381 19924399 GGTGTTCAGTACAAGGTGC 58 19924467 19925092 CATCTTGTCAACATTAACACCC 58 NA Drosophila melanogaster 61 CG32206 FBgn0052206 FBtr0089796 1 1 1 81 3L 19366646 19366664 ATATCCGAGACGAGAAGCC 58 19365494 19366601 AGGCCGTATCTCACAACTG 59 NA Drosophila melanogaster 61 CG14085 FBgn0036859 FBtr0074992 2 1 1 80 3L 19266240 19266320 TATGAGCAGGCTAAAGATCTG 57 19266362 19266380 GTCATCCTCGTCAATGGAG 57 NA Drosophila melanogaster 61 CG18135 FBgn0036837 FBtr0075044 2 1 4 220 3L 18985820 18986838 GATTCGCTCAAAGTGTGCC 59 18985618 18985637 CTAGAGCCACACTTCTGGAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6836 FBgn0036834 FBtr0075023 1 1 1 80 3L 18947758 18947841 AGATACATGGTATGGCAAATGC 59 18947879 18947900 CTGAATGTCCCGGTAGTATAGG 59 NA Drosophila melanogaster 61 CG18223 FBgn0036832 FBtr0075070,FBtr0075071 3 2 2 86 3L 18913160 18913178 GACAATCACTTCTGCGGTG 59 18913033 18913111 TACGATCTTGCGCTTATCCA 59 NA Drosophila melanogaster 61 CG34254 FBgn0085283 FBtr0112448 1 1 1 89 3L 18673555 18673574 TCTTTAAGTTCGATGGCGAG 58 18673626 18673697 CAAGGACTAGATGGCACTC 57 NA Drosophila melanogaster 61 rpr FBgn0011706 FBtr0075120 3 1 1 61 3L 18391230 18391248 TCACAGTGGAGATTCCTGG 58 18391187 18391205 TGACATGAAGTGTACTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 grim FBgn0015946 FBtr0075130 2 1 1 60 3L 18296898 18296917 TACGCTCTGCGAATCTACAG 59 18296857 18296876 ATATCTGAATGACCGTCGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6259 FBgn0036740 FBtr0075201 1 1 1 80 3L 17613873 17613892 CATGAAGGATGGAGTCAAGC 58 17613733 17613831 ATGTCGTCTTGGATGTCCTC 59 NA Drosophila melanogaster 61 tap FBgn0015550 FBtr0075216 1 1 1 60 3L 17354005 17354023 ATGGAAGGACTATCCGGAG 58 17354047 17354065 GTAGCTGTGTTGATGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6479 FBgn0036710 FBtr0075246,FBtr0075245 3 2 2 83 3L 17330898 17330916 CTGACTACCGCTGGTACTC 59 17330774 17330855 GGAATATTATAGCTGCATCGGTG 59 NA Drosophila melanogaster 61 CG11905 FBgn0036678 FBtr0113175,FBtr0075302,FBtr0075301,FBtr0075300 2 4 10 110 3L 16928399 16928601 GCTCTTGGTTCTTGTTCAAGG 59 16928309 16928327 TTTAACGCGAGGTTCTGGT 59 NA InUTR Drosophila melanogaster 61 CG32170 FBgn0052170 FBtr0075258 2 1 1 60 3L 16871926 16871947 TAAACCACAGAGTAGACCACAG 59 16871968 16871986 AACAGGTGCATTGTAGTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 nudC FBgn0021768 FBtr0075328 3 1 1 89 3L 16802381 16802399 GTAAGCTGATGCCGAATGC 59 16802452 16812019 ACGGAATCTTGAGCTCCAC 59 NA Drosophila melanogaster 61 spd-2 FBgn0027500 FBtr0075363 1 1 1 140 3L 16587091 16587171 GTGTCCAATTCTGTCTTGGC 59 16586970 16586988 TTCTGGTTCCAATAGCGGT 59 NA Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 1 2 2 103 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274836 16274854 TGGAAAGGAAGGAGACCAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13068 FBgn0036588 FBtr0075464 2 1 1 261 3L 16262534 16262622 CATGTTCAAGCTGTCTGCC 59 16262847 16262865 AACTGGAGCGGTATAAGCA 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13054 FBgn0036584 FBtr0075481 1 1 1 60 3L 16249867 16249885 GCTCAACGGATTCCTTCAG 58 16249825 16249843 CCATTGATAGGGCACTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5157 FBgn0036575 FBtr0075490 3 1 1 60 3L 16130055 16130076 TGTACGATGTAACCAAGTTCCT 59 16130016 16130036 TATTCGAGTAGTGCTTCACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mRpS31 FBgn0036557 FBtr0075519 3 1 1 111 3L 15998939 15999028 CAATCTGAGTGATATTATCGTGGG 59 15999098 15999116 CTTGAATCTGGAAGCCAGC 58 NA Drosophila melanogaster 61 CG7656 FBgn0036516 FBtr0075592 1 1 3 93 3L 15579681 15580112 ACTCACAGGACAATGAGTATCC 59 15579609 15579627 GTCATCGGAACCACAATGC 59 NA Drosophila melanogaster 61 CG7255 FBgn0036493 FBtr0301185,FBtr0110881,FBtr0100360,FBtr0110880 3 4 4 163 3L 15299747 15299765 AGTTCTGGGTCTATGGGAC 58 15299892 15300068 CATAGCAAACTCCTGCCAG 58 NA Drosophila melanogaster 61 CG32147 FBgn0047178 FBtr0075647 3 1 1 82 3L 15136796 15136905 CAGCCATATCTTGTTATCCATGTC 59 15136737 15136756 AACTTGTGATTGTACGCCAG 58 NA Drosophila melanogaster 61 shd FBgn0003388 FBtr0075676 1 1 1 80 3L 14612757 14612777 GGGCACTAAGTGGATATTCCT 59 14612816 14613027 CTGTTCAAATCCGCATATACCT 58 NA Drosophila melanogaster 61 CG13482 FBgn0036419 FBtr0075744 1 1 1 262 3L 14322566 14322584 GTTTGGAATCCACCTTGGC 59 14322810 14322828 GATGTCCATGGTGAGGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsc70Cb FBgn0026418 FBtr0075771,FBtr0075772,FBtr0075773 3 3 3 114 3L 14033001 14033019 TTGCTAGCCGAGTCTAAGC 59 14033097 14033179 CCGGCTTGTTAAAGACCTG 58 NA Drosophila melanogaster 61 CG10140 FBgn0036363 FBtr0075853,FBtr0300701 3 2 2 80 3L 13432678 13432759 TAAGTCGGACTGTCAGATCC 58 13432617 13432638 ATTCCTACAGTAGTAACGGGTG 59 NA Drosophila melanogaster 61 CG17666 FBgn0036311 FBtr0075924,FBtr0075923 3 2 2 145 3L 12776650 12776670 CGAAATAGAAGGTACCGTAGC 58 12776777 12776849 TTTCCTCAGGCAAATTGGC 59 NA DesignNoJunction Drosophila melanogaster 61 caup FBgn0015919 FBtr0075909 2 1 1 80 3L 12610320 12610341 TATCCCTCTAACGAACAGAACC 59 12610382 12610702 GTAGGGATTGCTCAGAGGT 58 NA Drosophila melanogaster 61 CG14125 FBgn0036232 FBtr0076044 3 1 1 140 3L 11968019 11968104 GCAATGAAGTTGGTCTGGA 58 11968208 11968226 ATCCCAGGGATCATCAGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG14126 FBgn0036223 FBtr0076068 3 1 1 80 3L 11930115 11930135 CATATCAAGCACTGTTCCTGC 59 11929751 11930075 GCACTGCAGATATAGTTGCTG 59 NA Drosophila melanogaster 61 CG11597 FBgn0036212 FBtr0076080 3 1 3 284 3L 11815018 11815036 AATTAAGTGCGTGGTGTCG 58 11814401 11814419 GAGCAAGTCACTCAACGAG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14130 FBgn0036210 FBtr0076031 1 1 1 129 3L 11809148 11809230 ATAGCACGAGATACTGCGG 59 11809323 11809341 GAATTCGGATCCGTTGCAG 59 NA Drosophila melanogaster 61 CG10361 FBgn0036208 FBtr0076084 1 1 1 84 3L 11792270 11792350 ATGAGATGCTAACCCGTGG 59 11792204 11792222 ATTTGAACACGGATGCGTG 59 NA Drosophila melanogaster 61 Gr68a FBgn0041231 FBtr0076118 2 1 1 60 3L 11745421 11745441 CAAACAGGATCTTCAGTTCAC 57 11745459 11745481 GAAGAGTGTTGAGTTGTCTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6024 FBgn0036202 FBtr0113164,FBtr0113165,FBtr0113166 2 3 3 91 3L 11731019 11736913 CGCCCAAGATTGACATCTC 58 11730946 11730964 GGTCACGTACTTCAGTGTC 57 NA Drosophila melanogaster 61 CG7339 FBgn0036188 FBtr0076107 2 1 1 97 3L 11641963 11641981 AGGACAATGTGAGGATTGC 57 11642042 11642117 AAGAAGGACCTTATTGGCC 57 NA Drosophila melanogaster 61 CG6418 FBgn0036104 FBtr0076274 3 1 1 60 3L 10869874 10869892 CACAGATCGCTATACAGCA 57 10869832 10869853 ACGGAACTGATTGTTATACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ir67b FBgn0036083 FBtr0076294 3 1 1 60 3L 10423668 10423687 TCTACCAGCAACCTCTTCAG 59 10423627 10423648 TTAAACAACTGCAAGTAGGGAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14168 FBgn0036044 FBtr0076374 3 1 1 133 3L 9786730 9786748 GATTTACCCGATCGTCCGT 59 9786488 9786634 TTTGGGAAGATCCCAAGGAC 59 NA Drosophila melanogaster 61 CG8329 FBgn0036022 FBtr0076387 3 1 1 60 3L 9631379 9631397 CCTGCGAATGAACAATGGA 58 9631421 9631439 CAGGACCCAATTGTTTCCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3335 FBgn0036018 FBtr0076383 2 1 1 101 3L 9617465 9617536 CCAAGCATATCACCGAAGAC 58 9617599 9617618 ATTGCCGAAACTTTCCATCG 59 NA Drosophila melanogaster 61 CG42526 FBgn0260431 FBtr0300855 3 1 1 81 3L 9428419 9428442 GAGAAATACCACACTAGATACGAC 58 9428307 9428383 GACAGTACTCAACTGATTTCTGG 59 NA Drosophila melanogaster 61 PGRP-LC FBgn0035976 FBtr0089490,FBtr0300291,FBtr0300290 1 3 6 84 3L 9338853 9338938 AATCGAGGGAAGTCTGCTC 59 9338986 9339004 TTGTAGCCTATGTGGTCCC 58 NA Drosophila melanogaster 61 Cp15 FBgn0000355 FBtr0076572 2 1 1 173 3L 8721631 8721720 AGTACCTGATTGTCTGCGT 58 8721857 8721875 GATAGCTGTTGTAGCCACG 58 NA Drosophila melanogaster 61 CG6662 FBgn0035907 FBtr0076652 3 1 1 98 3L 8517116 8517137 TCAAGTGTTTCTATCTGGATGG 58 8516984 8517059 GTTTGGCCTCATTGTATAGCA 58 NA Drosophila melanogaster 61 mtrm FBgn0010431 FBtr0076613 2 1 1 60 3L 8406295 8406313 CCGATCTTTGGCAACTTCC 59 8406337 8406355 CCTTCGTGCCCATATTCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13685 FBgn0035816 FBtr0076809 3 1 1 60 3L 7741003 7741023 TTGAACAGATGAAGTTGCCAC 59 7741045 7741063 GGATCCGATATCGTCTGGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8596 FBgn0035767 FBtr0076881 1 1 1 80 3L 7336702 7336777 CCTCAACAAGCTAGATCCC 57 7336640 7336658 AAGATCATTTGTCCCAGCG 58 NA Drosophila melanogaster 61 Neos FBgn0024542 FBtr0076835 3 1 1 98 3L 7235308 7235326 GGTGGACTTGTGATGTCAG 58 7235387 7235469 TGCGTATTTGGTATTCTCGC 58 NA Drosophila melanogaster 61 CG8629 FBgn0035742 FBtr0076925 1 1 1 72 3L 7121236 7121256 AGTTCTACGGTCTCTTCAAGC 59 7121184 7121202 TTGAGATCCAGAATGCCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prat2 FBgn0041194 FBtr0076946 1 1 2 94 3L 6906622 6906869 TATGTTGGGCTAGCTGGAC 59 6906546 6906564 AACTGGTCACTATTCCCGC 59 NA InUTR Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 1 3 3 80 3L 6609689 6609783 CAGATCTGATAATCTACTGCATTCG 59 6609821 6609839 ACAGCGCTTTGAAGATGTC 58 NA Drosophila melanogaster 61 CG33523 FBgn0053523 FBtr0091478,FBtr0091476,FBtr0091477,FBtr0091475 1 4 4 80 3L 5921670 5921689 ACTTCAATTCCAAGAATGCG 57 5921731 5921813 TGGTTTGGATCTTGTACGTC 58 NA Drosophila melanogaster 61 CG32412 FBgn0052412 FBtr0077080 2 1 1 82 3L 5894644 5894903 GACTTATGCTCATATTCTTCGATGG 59 5894586 5894608 CAGATGCTTTGATCCGTATACAG 59 NA Drosophila melanogaster 61 CG34342 FBgn0085371 FBtr0301080,FBtr0300031 2 2 2 81 3L 5498119 5498139 TTTCTTGCACAATATCCCAGC 59 5497206 5498077 GTATGCCTTCGCATAGATGC 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0301599,FBtr0077172,FBtr0077175,FBtr0077173,FBtr0077174 3 5 5 80 3L 5156244 5156459 CAGGTAGATGATCAGACTTCG 57 5156184 5156204 TTTGTATGAGGTTACTCCCAG 57 NA Drosophila melanogaster 61 Aats-ala-m FBgn0028962 FBtr0077168 2 1 1 86 3L 5141763 5141841 TCTGATCAATCGCGTTATCTG 58 5141889 5141907 GTGATGTCATTCTGCTCCA 57 NA Drosophila melanogaster 61 CG7514 FBgn0035567 FBtr0073367 1 1 1 60 3L 4688189 4688209 GTTATCACCCTCTGGAAAGGA 59 4688149 4688167 CCATGTTGACGATCATGGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tie FBgn0014073 FBtr0073323 3 1 1 88 3L 4512233 4512251 GCAGTACCACATGTTCACC 58 4511532 4512181 AGTACGGTGTTGATCCCAG 59 NA Drosophila melanogaster 61 CG12607 FBgn0035545 FBtr0073302,FBtr0290123 3 2 2 188 3L 4446612 4446631 AAATTGCTCGTTTGCTTCTG 58 4447281 4447299 ATCAATGTACTCCGGCTCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Teh2 FBgn0035505 FBtr0073258,FBtr0300621 2 2 2 133 3L 4181198 4181269 ATCATCACTCACCAAGTGC 57 4181083 4181104 CTGAGTTGATCAGAAACTTGGT 58 NA Drosophila melanogaster 61 CG1136 FBgn0035490 FBtr0073203 1 1 1 89 3L 4057519 4057539 GACTACATTGCCGATAAGCAG 59 4057590 4057664 TTTAATGGCGTCCTCAACG 58 NA Drosophila melanogaster 61 CG1134 FBgn0035483 FBtr0073193 3 1 1 107 3L 4022544 4022832 TCCCAAGGAGATTATCCTACTG 58 4022900 4022918 TTGGAGACGATGCTACCAC 59 NA Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073028,FBtr0073027 1 2 2 60 3L 3160820 3160840 CTTTCACCATAACGCAGTCAG 60 3160862 3160880 GTACCCGTTTCATCTGCCT 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32485 FBgn0052485 FBtr0072985 3 1 1 85 3L 3050622 3050643 TCCAAAGCAGTATCACAATGAC 59 3050688 3051014 TTAGAATGGCCTGAAATGCG 59 NA Drosophila melanogaster 61 CG16758 FBgn0035348 FBtr0072966,FBtr0072964,FBtr0072963,FBtr0072965 2 4 4 80 3L 2499740 2499761 TCAGCCTCATCACAAATAAGTG 58 2499614 2499699 CAGCCATAACCTCATCGTG 58 NA Drosophila melanogaster 61 CG1317 FBgn0035333 FBtr0300773,FBtr0072901 2 2 2 188 3L 2370045 2370123 CAATTGCTGCTCTTACAAATCG 59 2369878 2369897 ATTCTCCACGCCTTCTTCTC 59 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 3 4 4 281 3L 2253685 2253788 TGTATGGCAACTCCATTCTG 58 2253423 2253441 TGGCGATCCTGTAGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG13936 FBgn0035282 FBtr0300713 1 1 1 95 3L 1851492 1851676 AGAAGAACGTTCAGTTTCGT 57 1851350 1851368 AGTAGGAATTGAAGCCAGC 57 NA Drosophila melanogaster 61 CG42676 FBgn0261562 FBtr0302729 3 1 3 112 3L 1803466 1803484 TCCGGAACAAGAAGATCGG 59 1803560 1803805 ATCGTCCAGAGCTTGACTG 59 NA Drosophila melanogaster 61 CG12020 FBgn0035273 FBtr0072778 3 1 1 92 3L 1798303 1798321 CAACAAGAAGGTGGAGCAG 58 1798438 1798459 CGAGTGATATGCTTCATATGTG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 3 5 5 99 3L 1743821 1743909 GAACTTGACAAACGGAGCTC 59 1743971 1743989 GAGCAGAACAGGATCCCAG 59 NA Drosophila melanogaster 61 CG13928 FBgn0035246 FBtr0072822 3 1 1 61 3L 1627697 1627716 AAAGGTCAATAAGGTGTGCA 57 1627655 1627674 AGTACTGCTGGTACATACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rac1 FBgn0010333 FBtr0072730 3 1 1 110 3L 1302223 1302241 GTGTTCGACAACTACTCGG 58 1302131 1302150 ATAAGACAGTGGCCTCAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 2 2 2 124 3L 1253220 1253310 GAGTTCGATAGAGAATGCCC 58 1253397 1253415 TTCTCCTGGATGAAGCGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 LysS FBgn0004430 FBtr0072631 2 1 1 93 3L 1228000 1228018 GATCTGTACTGGTGCCAGG 59 1228075 1228093 CAGAGTTGGTGATGTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 LysX FBgn0004431 FBtr0072637 1 1 1 60 3L 1194998 1195016 GATGTGAGTTGCAACGCTC 59 1194956 1194974 TTAGGGCACATCTTACGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13908 FBgn0035178 FBtr0072618,FBtr0113121 1 2 2 110 3L 987333 987351 GAACTACGGCACCAATCTG 58 987424 988752 GAACGAACAATCCTTCCGTG 59 NA Drosophila melanogaster 61 CG32479 FBgn0052479 FBtr0072589 3 1 1 81 3L 890163 890553 CTGTGAACGCCATGATGTC 59 890596 890616 TTGTTAAGGTTGTTCAGACGC 59 NA Drosophila melanogaster 61 emc FBgn0000575 FBtr0072578 2 1 1 93 3L 750213 752275 AACAGTTTAGCAACGCCAC 59 752332 752350 GCTTATAGGTTCCGTGGGT 59 NA InUTR Drosophila melanogaster 61 CG13897 FBgn0035160 FBtr0072601 3 1 1 171 3L 738721 738995 AATGGATGTTGAGCTTTGCC 59 738569 738590 GTTATCACATTCCTCCCTTTGG 59 NA Drosophila melanogaster 61 Ppm1 FBgn0035143 FBtr0072553 1 1 1 80 3L 581496 581568 GACAAACAGTTCACAATGGGA 59 581610 581628 ATAGCTTGCATTGGCACAG 59 NA InUTR Drosophila melanogaster 61 CG13885 FBgn0260471 FBtr0100297 2 1 1 152 3L 391608 391626 TATACACTCGCATCACCAC 57 390987 391495 TGCACTTCATAACTGTAGTAGG 57 NA Drosophila melanogaster 61 CG34264 FBgn0085293 FBtr0299835,FBtr0299836 1 2 2 162 3L 317402 317473 TGAGCCAGAACGAATCCTG 59 317599 317617 TCTCTACTTCGGTTTGCGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 snoRNA:Me28S-A2589c FBgn0086025 FBtr0114301 1 1 1 70 2R 17219094 17219113 ACTGTCACTGATAGTTGGAC 57 17219145 17219164 CAAATGCGAACATCCTAGGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-841c FBgn0083017 FBtr0113522 1 1 1 107 2R 17218090 17218108 CAAATGCACTCTGTGTCAC 57 17218179 17218197 TAATCACCCTGATACGGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi28S-3378 FBgn0082963 FBtr0113518 1 1 1 60 2R 17217269 17217290 AGTAAATTCGCTATAATGCCGC 59 17217308 17217329 AGCATTCTAGGGCTAGATTAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR30250 FBgn0050250 FBtr0087962 1 1 1 60 2R 8221785 8221803 TCGTCTAGTGGTTAGGACC 57 8221743 8221761 GTGACCAGGATTCGAACCT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3760 FBgn0022343 FBtr0072392 2 1 2 74 2R 20826297 20826315 ATGGAAGGAGTTCGAGGAG 58 20826353 20826484 GAAGAGATGGTGCTCAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG3880 FBgn0035057 FBtr0072371 3 1 1 133 2R 20649661 20649735 CCCGATTTGATCAGTGGTC 58 20649831 20649850 ATTAATGTGCAGTGGGTAGC 58 NA Drosophila melanogaster 61 Crtp FBgn0029501 FBtr0072299 1 1 1 84 2R 20382909 20382979 GAGATTGCAGAACACGAGC 59 20383027 20383045 TGTCCAGATTGCGACTAGC 59 NA Drosophila melanogaster 61 bs FBgn0004101 FBtr0072271 2 1 2 139 2R 20235853 20235871 GAAAGCAGCTCATCCAGAC 58 20235974 20262946 TCGGTCATCTTTCGAGTCC 59 NA Drosophila melanogaster 61 slbo FBgn0005638 FBtr0072272 1 1 1 63 2R 20219999 20220017 TAATGAACCACGCCAATCC 58 20219954 20219972 TGTTCGTTGGTGTTGAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 3 2 2 97 2R 20008261 20008279 TGCATCAACGAATCGTTGG 59 20008340 20008428 GACAACCGAGTGTTCTCCT 59 NA Drosophila melanogaster 61 CG3257 FBgn0034978 FBtr0100568,FBtr0072252 2 2 2 96 2R 20008261 20008279 TGCATCAACGAATCGTTGG 59 20008339 20008427 ACAACCGAGTGTTCTCCTC 59 NA Drosophila melanogaster 61 sei FBgn0003353 FBtr0072169,FBtr0072170 3 2 2 80 2R 19938184 19938203 GACGTTACCTTCATCGTGGA 59 19938246 19938326 GGGATGGGATACCACTTCG 59 NA Drosophila melanogaster 61 CG2970 FBgn0034936 FBtr0072145 3 1 1 81 2R 19837432 19837510 TGATCCGTACAAAGCCTCG 59 19837555 19837573 CTCCGATCTCATCGTCGTC 59 NA Drosophila melanogaster 61 CG5554 FBgn0034914 FBtr0072126 3 1 1 177 2R 19732845 19733067 TGATCGAGTTCTTTGCTCCA 59 19733206 19733294 TTTACGTGGTAGATGGTGGG 59 NA Drosophila melanogaster 61 CG4019 FBgn0034885 FBtr0072104 3 1 4 134 2R 19496194 19501997 CTTCCTGGTTGCTGTAAGG 58 19496078 19496096 AAAGAGGTCCGTCTTCACG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 apt FBgn0015903 FBtr0072068,FBtr0072066,FBtr0072070,FBtr0072069,FBtr0072067 1 5 5 80 2R 19484772 19484793 AGAAGTTCTCCAATCAGTTTGG 58 19484834 19484915 GAGTACATGCCTTCATGCG 59 NA Drosophila melanogaster 61 CG13550 FBgn0034853 FBtr0072010 1 1 1 104 2R 19255882 19255900 ATGAGCTCTATGAGGGCAC 59 19256025 19256043 CCGTTCCAGTATCCATGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG34423 FBgn0085452 FBtr0301854 1 1 2 60 2R 19246244 19246263 TTTACACTGCGACGATTCAG 58 19246283 19246369 ACATCTTCAAGTGCTGAATCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG13539 FBgn0034833 FBtr0071998 3 1 1 60 2R 19072305 19072325 TACCTGAAGACAGTGAAGCTC 59 19072346 19072365 ACTCCTCGATGTGAATGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3499 FBgn0034792 FBtr0071906 2 1 1 93 2R 18772753 18772827 CAACAGCTAAATCAGATACGTG 57 18772681 18772700 CATTCTTTAGTCGGGAGGTC 57 NA Drosophila melanogaster 61 CG12490 FBgn0034782 FBtr0302717 2 1 1 80 2R 18722643 18722720 AACTTTCCGGAATACGATTGG 58 18722762 18722780 TTGGGTCAAGATGTAGCCC 59 NA Drosophila melanogaster 61 Cyp6d2 FBgn0034756 FBtr0071928 1 1 1 80 2R 18541285 18541305 ACGTCTAGGGATGAATCTCTG 58 18541152 18541246 GTTCATTAGCTTAGCAATCGGT 59 NA Drosophila melanogaster 61 CG3624 FBgn0034724 FBtr0071845 2 1 1 81 2R 18282167 18282185 ACAAGACCCTCAGTGTGAC 59 18282046 18282122 TCTGAGCTGTGCAAATTGC 59 NA Drosophila melanogaster 61 CG11206 FBgn0034720 FBtr0071846,FBtr0113106,FBtr0071847,FBtr0113107 1 4 4 80 2R 18227482 18227503 AAGTATATCACGAGTGTTTGCC 58 18227293 18227444 TAGTCGGCATATTCAGTCACTC 59 NA Drosophila melanogaster 61 CG30403 FBgn0050403 FBtr0114523 3 1 1 81 2R 17598165 17598635 CTTGGACACGAATGAGTTGG 59 17598103 17598122 CTTAATCGGCTTCAGTCTGG 58 NA Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 2 2 2 88 2R 17585954 17585972 AGAAGGATAATCCCGGCAG 59 17585801 17585902 CTCCCACTCGGTCTTATCC 59 NA Drosophila melanogaster 61 CG9865 FBgn0034649 FBtr0071680,FBtr0071681 1 2 2 80 2R 17557087 17557108 GTGGAATCGATTTGGAGAAGAC 59 17556972 17557049 GACATTATTTGTTCGACTTGCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG10494 FBgn0034634 FBtr0071700 3 1 2 109 2R 17406363 17406443 ACCTTATGAATCTGGGAAATGC 58 17406275 17406296 AATGATTTCCAGAAAGGTCTCC 58 NA Drosophila melanogaster 61 CG4266 FBgn0034598 FBtr0071629,FBtr0113100 3 2 2 80 2R 17054332 17054407 GAACGTAATGAAGGGAAATGC 58 17054272 17054291 TTGTTAAGGTCCATGCTGTC 58 NA Drosophila melanogaster 61 CG15657 FBgn0034595 FBtr0071635 1 1 1 87 2R 17035472 17035549 TTTCGAGCATTGAACAGGC 59 17035403 17035421 ATCACCATTACCGGGTGAC 59 NA Drosophila melanogaster 61 CG11159 FBgn0034539 FBtr0086248 1 1 1 94 2R 16543688 16543706 CAGCTACGGTCTGTTTCAG 58 16543481 16543578 CGTTAAGGAACTCTTCGCA 57 NA Drosophila melanogaster 61 CG13428 FBgn0034515 FBtr0086267 1 1 1 112 2R 16427729 16427747 GTTCGTCGGTTTGTTCAGG 59 16427303 16427472 ATGTATCACGACGGGATCG 59 NA Drosophila melanogaster 61 CG13426 FBgn0034510 FBtr0086295 1 1 1 100 2R 16400503 16400576 ATGTGCCAAGAGGAGTGTC 59 16400421 16400443 GAACCATTAAGATCAGCAGATCC 59 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 2 3 3 80 2R 16217662 16217744 ACCTGAAGGACTATATCAAGTGG 59 16217781 16217802 AGTACTCATAGTAGCGTTCCTG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0086545,FBtr0301356,FBtr0086548,FBtr0301361,FBtr0301359,FBtr0301360,FBtr0301362,FBtr0301358,FBtr0086547 1 10 10 80 2R 15298013 15298105 CAACAAGAGTCACTTTGTCC 57 15297952 15297970 CTGCAGCCGATATAGATGG 57 NA Drosophila melanogaster 61 endoB FBgn0034433 FBtr0086558,FBtr0086559 3 2 4 82 2R 15196009 15196085 CCAATGAGGTGATCTTCGTG 58 15195946 15195965 CAGACCCTTCAATAGACCCT 58 NA Drosophila melanogaster 61 CG5493 FBgn0034364 FBtr0086713 2 1 1 80 2R 14504757 14504775 GATCGATAGCCGAGAGCTG 59 14504618 14504717 CCCAGATTGTCATTTATGTAGGC 59 NA Drosophila melanogaster 61 CG5190 FBgn0034351 FBtr0086696 3 1 1 60 2R 14339701 14339720 AGAACCTGGTCTACCTAACG 58 14339742 14339761 TCATCTGGGTTGTAAGTGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14500 FBgn0034318 FBtr0086752 1 1 1 60 2R 14076879 14076900 GGTGATTGTCTTACACTGATGG 59 14076919 14076939 CACTCAATATGGCTTCTTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 elk FBgn0011589 FBtr0086802 3 1 1 80 2R 13809520 13811139 GATATTAAGGCGCTAACCTACTG 59 13811176 13811197 CTCCGGATATAAGCGTAGTACC 59 NA Drosophila melanogaster 61 CG33981 FBgn0250851 FBtr0100025,FBtr0100026 1 2 2 93 2R 13663150 13663230 TGGTTCAGATGTCCTGGTC 59 13663075 13663093 TCCAGGAAGGACGAATCTC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6459 FBgn0034259 FBtr0086892 1 1 1 80 2R 13559420 13559439 ATAAAGGGCAACTCTACGCT 59 13559301 13559378 GAAGACATCGTTGTACTCGC 59 NA Drosophila melanogaster 61 rhi FBgn0004400 FBtr0086897 1 1 1 88 2R 13519520 13519538 GGAAGCGTATCCATTGCAG 59 13516244 13519469 TGTACAAACCCGGTACTAGG 58 NA InUTR Drosophila melanogaster 61 Klp54D FBgn0004377 FBtr0086826 1 1 1 80 2R 13450773 13451241 GAGTTTATGCCAGACAGTATTAGC 59 13451280 13451298 AGCAGCCATTATGTCCAGG 59 NA Drosophila melanogaster 61 CG4847 FBgn0034229 FBtr0086937,FBtr0086936,FBtr0086934,FBtr0086933,FBtr0086935 2 5 5 182 2R 13400213 13400291 ACTTCTTGAGCCAATCTGG 57 13400436 13400455 GACTAAGGAACTCAGAGTGG 57 NA Drosophila melanogaster 61 CG30103 FBgn0050103 FBtr0086929 3 1 1 80 2R 13381927 13381946 TAAGACCGGATACCAAGGAG 58 13381987 13382066 TTGTTTCCTTATTGATGGCGG 59 NA Drosophila melanogaster 61 CG10950 FBgn0034205 FBtr0086990 2 1 1 165 2R 13082731 13082753 CATCTACCTCATAGTTCACAGAC 58 13082931 13082949 CAATGAAATGTTGCCCGAG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 GstS1 FBgn0010226 FBtr0087006 2 1 3 81 2R 12984351 12984372 ATATAGAAACGACCATAGCACC 57 12982548 12984311 CTTTCTCAATGCAATTCCCTC 57 NA InUTR Drosophila melanogaster 61 ste24c FBgn0050462 FBtr0100121,FBtr0100120 3 2 2 129 2R 12885897 12885974 CAAGAGGCAGCAATTGGTG 59 12885786 12885806 CTTCCATATCTGTAGCTCCGT 59 NA Nonspecific Drosophila melanogaster 61 unc-104 FBgn0034155 FBtr0113088,FBtr0113087,FBtr0087079,FBtr0113089 1 4 4 80 2R 12643608 12643626 CCAGAACGCGAATACAACC 59 12643487 12643565 GCTCTTAGTATAGCGTCCCT 58 NA Drosophila melanogaster 61 Khc FBgn0001308 FBtr0087184 1 1 1 80 2R 12157149 12157306 TGTGACAAACATGAACGAGC 59 12157088 12157106 TGGTTCTCCAGGTTCTCCT 59 NA Drosophila melanogaster 61 CG10731 FBgn0034081 FBtr0100497 1 1 1 118 2R 12036519 12036537 ATGGGCCTAACTCTGAAGC 59 12036294 12036440 GAATCGATAAATTGTGCAAGCC 59 NA Nonspecific, InUTR Drosophila melanogaster 61 Ext2 FBgn0029175 FBtr0100512,FBtr0100513 3 2 2 80 2R 12034718 12034736 CTGTAGTGCCATCATTGCA 58 12034592 12034675 ATGGAAAGGTGGATAAGTGC 58 NA Nonspecific Drosophila melanogaster 61 CG8195 FBgn0034032 FBtr0087353 1 1 1 80 2R 11452078 11452097 ATTTACCTGCTAGTCATCGG 57 11451961 11452038 CTCCATCATAGCATAGTTTCCA 57 NA Drosophila melanogaster 61 CG8152 FBgn0034008 FBtr0087392 3 1 1 60 2R 11198384 11198403 AGCTCGTGAGTTCTACAAGG 59 11198343 11198361 TGGAAGGTTAGGTTGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8090 FBgn0033995 FBtr0087404,FBtr0300325 3 2 2 80 2R 11087798 11087887 CTATTTCATCAAGCCAGTGTCTC 59 11087740 11087758 GCCGACAGCATTTCTACTG 59 NA Drosophila melanogaster 61 Cyp6a20 FBgn0033980 FBtr0300127 2 1 1 81 2R 10770713 10770861 GTCATTGATGAGACCATGAGG 58 10770904 10770922 GATTGGTGTGCTGGTAGTG 58 NA Drosophila melanogaster 61 Pcf11 FBgn0022063 FBtr0302560,FBtr0301513,FBtr0302294 3 3 4 100 2R 10756534 10757571 GAATATTACATCAGCCAGGTGG 59 10756455 10756473 AACAATTGGACGTAGCTGC 58 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 2 2 2 93 2R 10636930 10636949 CCATAATGTGGTAGGTCAGG 57 10637004 10637087 ATGACCAGCATTGTTGTAGG 58 NA Drosophila melanogaster 61 AttB FBgn0041581 FBtr0300942,FBtr0087438 1 2 2 92 2R 10636930 10636949 CCATAATGTGGTAGGTCAGG 57 10637004 10637086 TGACCAGCATTGTTGTAGG 57 NA Drosophila melanogaster 61 mspo FBgn0020269 FBtr0087477 3 1 1 86 2R 10560573 10567460 AAATGAATCCCATCTATGGCAG 58 10560508 10560526 CATGCTTGTCGTTCTTCGG 59 NA Drosophila melanogaster 61 CG10131 FBgn0033949 FBtr0087499 2 1 1 116 2R 10517731 10517749 GTACTCGCAGTTGGATGAG 58 10517829 10517903 GCCACTAGCATCTGTTGTC 58 NA Drosophila melanogaster 61 CG34185 FBgn0085214 FBtr0112378 1 1 1 80 2R 10261684 10261762 GACCTGAATCCTATGAAGGTG 58 10261624 10261645 CCATTATATCCTCATCCACCTC 57 NA Drosophila melanogaster 61 CG34442 FBgn0085471 FBtr0112746 3 1 1 85 2R 10254943 10255018 ATTAAGAAGGTCAGGGTTTCC 57 10255063 10255083 CATTAACTTCACCCAGTTGTG 57 NA Drosophila melanogaster 61 Arc2 FBgn0033928 FBtr0087547 2 1 1 60 2R 10249873 10249896 AACCTTCCTACCAGATATACATGG 59 10249914 10249933 ATCACTTCGTCGTAGGACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18324 FBgn0033905 FBtr0087523,FBtr0087524 3 2 2 81 2R 10057017 10057084 CCTTCTACATGATAAAGGCCC 58 10057126 10057145 ATCGAAGTATGCTTGTGCTG 58 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 1 4 4 110 2R 9717362 9718065 GCATACAAGTGACCACTGC 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 stj FBgn0261041 FBtr0087631 3 1 1 80 2R 9697166 9697429 CTGATTCAAGCCAATCTGGG 59 9697470 9697490 ATAATTGGCGATCGATTTGGG 59 NA Drosophila melanogaster 61 CG10799 FBgn0033821 FBtr0087748 3 1 1 60 2R 9145636 9145655 GACACTAGTAACAGCACGGA 59 9145675 9145696 CGTTAACATTCTCATTGCTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mp20 FBgn0002789 FBtr0005009,FBtr0087745 2 2 2 64 2R 9134724 9134742 TACCAACACCATCTTCGCT 59 9134837 9134855 GGAAGGGACCCTTGAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG4670 FBgn0033814 FBtr0087760 1 1 1 60 2R 9121004 9121025 GGGTACATCAAGAACTTCTTCG 59 9120046 9120983 ATGCCATTGCCTGAAAGTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG12765 FBgn0033813 FBtr0087742 3 1 1 145 2R 9118201 9118221 TCCGTAGTAAAGGGAAATGTG 57 9118387 9118407 GTCATACCGCATGCTAATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG17724 FBgn0033802 FBtr0087771 1 1 1 85 2R 9072339 9072357 CAAACTACGGCCAGTAGTC 58 9067606 9072290 TATATCGTAGCGGCAACAC 57 NA InUTR Drosophila melanogaster 61 ox FBgn0011227 FBtr0087861 2 1 1 145 2R 8644912 8644933 TGAAGGTTATCTACAACACCCT 58 8644722 8644806 GTCCTTCCAGAGTTTGCCT 59 NA Drosophila melanogaster 61 stil FBgn0003527 FBtr0087825 3 1 1 94 2R 8458135 8458229 ACATGCACATCAAGAGACG 58 8458287 8458305 TTTCATGATCCGATCACGG 57 NA Drosophila melanogaster 61 CG34234 FBgn0085263 FBtr0112428 2 1 1 205 2R 8374430 8374449 TTGGACTGAATTAATGCCCT 57 8374244 8374262 TTTATAAACCAACGGGCCA 57 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG12370 FBgn0033744 FBtr0087936,FBtr0113075 2 2 2 80 2R 8373035 8373056 GACTGGATATTCAAGGTACCTG 58 8373096 8373181 GATGAGTACCCACATGATGC 58 NA Drosophila melanogaster 61 Prp8 FBgn0033688 FBtr0088016 3 1 1 81 2R 8047806 8047883 CGGAAATGCTTTCCATTTGTG 59 8047745 8047767 GTTTAGCCGATACTGAACATGAG 59 NA Drosophila melanogaster 61 CG8378 FBgn0027495 FBtr0087983 3 1 1 81 2R 8028712 8028786 ACTTCCAGGCTCTAGAGCT 59 8028830 8028849 TTAGCATAGCCGATGGACAG 59 NA Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088042 1 1 2 88 2R 7860470 7860488 AAGTGTTTGGTGGACATGC 59 7860538 7862873 CTAGCTTGTTTATCAGCAGCT 58 NA Drosophila melanogaster 61 qvr FBgn0260499 FBtr0114575 1 1 1 83 2R 7334861 7335042 GAGATCACCGTACGAGGTG 59 7335089 7335107 ATCATGCACACGTGATCGA 59 NA Drosophila melanogaster 61 mms4 FBgn0033549 FBtr0088222 1 1 1 60 2R 6699395 6699414 GATCATTTCTCCAGCGATCC 58 6699435 6699455 ATCGCTTGATCTTCAAATCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12340 FBgn0027499 FBtr0088253 1 1 1 80 2R 6689155 6689751 AGTTCCTACTACCTCGACC 57 6689093 6689111 CTTTAGTTGTGCACTTCGG 57 NA Drosophila melanogaster 61 CG12901 FBgn0033513 FBtr0088354,FBtr0088355 1 2 3 105 2R 6244180 6244198 GATGCTTTGCGACAGACTC 59 6244093 6244111 ATCTTTGTCGCCTCCATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12911 FBgn0033501 FBtr0289962,FBtr0088336 3 2 2 80 2R 6146890 6146909 GGATATGGATACGACAACCG 58 6146951 6147034 ATCGTAGTAGCGATCTCTGG 58 NA Drosophila melanogaster 61 Syb FBgn0003660 FBtr0273274,FBtr0088362 1 2 4 62 2R 6137327 6138396 ATCATCGTTCTGGTGTCCG 59 6137283 6137301 CTTGTTTCCTCCACCACTG 58 NA DesignRelaxed Drosophila melanogaster 61 Or46a FBgn0026388 FBtr0088331 2 1 2 99 2R 6029335 6029353 GTCCTTCTCATGATGCAGC 58 6029414 6029495 AGTTGACGATAGAACCAAAGG 58 NA Drosophila melanogaster 61 mRpL42 FBgn0033480 FBtr0088403 1 1 1 60 2R 5954567 5954586 AAGCAAACATCCAGAAGTGG 58 5954609 5954627 GTGTTTAGTCGTGTGGGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2249 FBgn0040773 FBtr0088396 1 1 2 91 2R 5938172 5938190 TACCTAATTGCGGGAGTCG 59 5938244 5938319 TCATCCTTGGGATCATTGGT 58 NA InUTR Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 3 3 3 80 2R 5919620 5919729 TACCAGATCAATGGAGGATACC 58 5919561 5919579 GAATGCGTTTCTGGGTGTC 59 NA Drosophila melanogaster 61 Pka-R2 FBgn0022382 FBtr0088438,FBtr0112902,FBtr0112901,FBtr0088437,FBtr0088439 3 5 5 91 2R 5885978 5885996 TCTTGAAGTCGGCCTTCAG 59 5885837 5885923 CATGCGTTCGTAGTTCTGC 59 NA Drosophila melanogaster 61 CG1599 FBgn0033452 FBtr0089394 2 1 1 110 2R 5728842 5728920 GCAATAATTCCGTTGCATTCC 59 5728752 5728773 AAACGATGAAGGTTATCACCAG 58 NA Drosophila melanogaster 61 Mmp2 FBgn0033438 FBtr0088501 1 1 1 104 2R 5503002 5554881 TCTTACGTGGAGCATGGTC 59 5502916 5502934 AATGTCAGCTTCGAGTGGT 59 NA Drosophila melanogaster 61 hig FBgn0010114 FBtr0088608,FBtr0100119,FBtr0088606,FBtr0088607 2 4 4 80 2R 5120059 5120077 GCTATGCAAGATCCGTTGC 59 5119335 5120017 ACATTCCCATTATCGTCCTCC 59 NA Drosophila melanogaster 61 CG33199 FBgn0053199 FBtr0088688 2 1 1 88 2R 4838293 4838430 ATTGCCAAACGAAACGTCC 59 4838223 4838241 TAAACGGAAAGCGTACAGG 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Cirl FBgn0033313 FBtr0290112,FBtr0301363,FBtr0290113 1 3 3 84 2R 4503950 4503968 CAATGACCACGGGAATGTG 59 4504016 4504217 CTTGTGGGCACATCTTGAG 58 NA Drosophila melanogaster 61 Lcp1 FBgn0002531 FBtr0088763 3 1 1 122 2R 4318619 4318704 GTTCAAGTTTGTCATGATCTGC 58 4318518 4318536 CGAACATCATCGGATTGGG 58 NA Drosophila melanogaster 61 CG33087 FBgn0053087 FBtr0088791 1 1 1 80 2R 4112624 4112778 GATGACAAGGGTAACTTTGC 57 4112821 4112839 TATTTCAGTGCTCACTGGC 57 NA Drosophila melanogaster 61 cathD FBgn0029093 FBtr0088898 2 1 1 114 2R 3709984 3710065 ATCGGTGGTCAGTATGTGG 59 3709888 3709908 CCACACGGAGAATATAGTCCT 58 NA Drosophila melanogaster 61 CG1882 FBgn0033226 FBtr0088834 2 1 4 151 2R 3700485 3700791 CATGGACCTAGAGGATCCC 58 3700906 3700924 CGATATCCACGAAGAAGCC 58 NA Drosophila melanogaster 61 CG12824 FBgn0033222 FBtr0088830,FBtr0113050 1 2 2 144 2R 3677996 3678074 CTTGAGGGAATTATCCTACGC 58 3678235 3678254 TAAGTAGAGGAACATGGCGG 59 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088937 3 1 3 122 2R 3609630 3609648 ATGCTAGAAGGCATGACGT 59 3607489 3609544 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG34216 FBgn0085245 FBtr0112409 1 1 1 87 2R 3591413 3591759 TCCCTTTATGCAAAGCCAC 58 3591344 3591362 GGAGGAACTCCAGATGGAG 58 NA Drosophila melanogaster 61 CG1360 FBgn0033195 FBtr0088951 2 1 1 86 2R 3477154 3477172 ATTTGCTGTGGAACTGTGC 59 3477026 3477109 TCCTACAGGTGGTTATGTAATAGG 59 NA Drosophila melanogaster 61 blow FBgn0004133 FBtr0300591,FBtr0300368,FBtr0088952 1 3 3 67 2R 3470142 3470160 ATCTGGAGATGCTTGCCTC 59 3469834 3469852 ATCAATGTACTCCCGCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyt-b5 FBgn0033189 FBtr0088905 1 1 2 137 2R 3421203 3421221 AACATCTACGACGTCACCG 59 3422923 3422941 CTTCTTCATCATGTCGCGG 59 NA DesignNoJunction Drosophila melanogaster 61 Cyp6u1 FBgn0033121 FBtr0086185 3 1 1 152 2R 2860416 2860435 ATTCTGCCTCTACGAGTTGG 59 2860225 2860301 CGAAGCGTTTCATTGAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 Spn1 FBgn0028988 FBtr0300357,FBtr0086163 2 2 2 70 2R 2771955 2772031 TTAGAGAAGCTGGGCATCC 59 2772065 2772083 GACTTATCGGCGAACAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 ZIP1 FBgn0033096 FBtr0086139 2 1 1 195 2R 2604077 2604172 AAATTCTTTCTGACGAAGCG 57 2603901 2603921 GCGTTGGATAAGATTTCTGAG 57 NA InUTR Drosophila melanogaster 61 CG30432 FBgn0050432 FBtr0086002 2 1 1 60 2R 2085528 2085547 CCGGAATCTTGGGATAAAGG 58 2085487 2085505 CGTATAGGATGACGACGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7861 FBgn0033055 FBtr0085974 1 1 1 80 2R 1931529 1931604 CCCATTTGGAATGAGGCTG 58 1931646 1931666 TAAGTGCGGAGTCTTACTCAG 59 NA Drosophila melanogaster 61 CG30441 FBgn0050441 FBtr0299872 2 1 1 143 2R 1239551 1239569 GAGTTGAGCATCCAAACCT 57 1239426 1239445 CCTTATCGACATCTTTGGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 snoRNA:Psi18S-525f FBgn0083033 FBtr0113548 2 1 1 60 2L 20419780 20419798 GTAAAGTGGCATTCTCGGG 59 20419819 20419840 AGTTGATTTGGGAGTGTTTGAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His-Psi:CR31616 FBgn0051616 FBtr0085889 1 1 1 60 2L 21404408 21404429 GAGAATTATTCCGCGTCATCTG 59 21404449 21404468 CAGCTTGTTTAACTCCTCGT 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 dimm FBgn0023091 FBtr0081514 1 1 1 90 2L 21339203 21339221 AGACGGACACAATGGACTG 59 21339273 21339357 ATTGCTTAGCTGTGAAGTTCG 59 NA Drosophila melanogaster 61 del FBgn0086251 FBtr0081502 1 1 1 68 2L 21148217 21148235 GTTGGAGAAAGCCCTACTG 57 21148103 21148121 CCAAGAGCTCCTTTCTCAG 57 NA DesignNoJunction Drosophila melanogaster 61 ns4 FBgn0032882 FBtr0081409 3 1 1 129 2L 20753100 20753186 CTACTTTAAGGAATACGTGGACG 59 20753275 20753293 GATGTCCGAGAACTCCAGG 59 NA Drosophila melanogaster 61 CG34007 FBgn0054007 FBtr0100062 1 1 1 80 2L 20495230 20495306 AAATACGTGCTGCCTACAG 58 20495350 20495368 GGACGAAACACATTTGGGT 58 NA Drosophila melanogaster 61 CG10730 FBgn0032843 FBtr0081346 2 1 1 80 2L 20071695 20071831 GCCTATAATCAGCTAAGAAGGC 58 20071636 20071656 GCAACTGGTGATCATGTAGTC 59 NA Drosophila melanogaster 61 l(2)37Bb FBgn0002021 FBtr0081177 3 1 1 100 2L 19051029 19051109 GAAGGATGACACGTATGCC 58 19050947 19050966 CGGCAAATAGTGACATTTGG 57 NA Drosophila melanogaster 61 CG10639 FBgn0032729 FBtr0081186 1 1 1 92 2L 18973982 18974000 TAGCCTACTCAATGTGGGC 59 18973451 18973926 TCATAATCTCCGCAGCTCG 59 NA Nonspecific Drosophila melanogaster 61 ScpX FBgn0015808 FBtr0081109 1 1 1 191 2L 18832286 18832370 GTCAATAATCCCTACTCGCAG 58 18832523 18832541 TACAATTTCGACAGCCTGC 58 NA Drosophila melanogaster 61 tos FBgn0015553 FBtr0081131 1 1 1 80 2L 18681088 18681163 AATCTTGAGGTAGATGACGAC 57 18681028 18681048 CGGGTTGTAGATAAACATGTG 57 NA Drosophila melanogaster 61 tos FBgn0015553 FBtr0081131 2 1 1 80 2L 18681090 18681165 GCAATCTTGAGGTAGATGACG 59 18681030 18681051 GGTTGTAGATAAACATGTGCCT 58 NA Drosophila melanogaster 61 CG7200 FBgn0032671 FBtr0081062 3 1 1 83 2L 18157856 18157929 CAAGAACTCATGGACCTCCT 59 18157792 18157810 AGCCATTTCTTAAGGCCCA 59 NA Drosophila melanogaster 61 CG15152 FBgn0032665 FBtr0081034 3 1 1 60 2L 18114841 18114859 CAACTGGTCCACCATACTG 57 18114881 18114901 CACGGTTCCCAGAATAAACAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15142 FBgn0032645 FBtr0080995 3 1 1 109 2L 17498456 17498475 GTACACCAAGTACATGCAGG 58 17498311 17498386 CATCGAGACCTATAGATGTGC 57 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442,FBtr0290265,FBtr0080977 1 10 10 110 2L 17401047 17401125 CGATGATATCAGATACTTTGAGTGC 59 17401193 17401211 GATCCGGTCCTGGAAAGAC 59 NA Drosophila melanogaster 61 CG34170 FBgn0085199 FBtr0112361 2 1 1 61 2L 17311721 17311742 CGTTAAGGATAAGCTGAATCTG 57 17311681 17311699 ATCCATCCCGGTATACCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300002 2 1 4 83 2L 16559936 16597220 TTTATCGAGGTGAGTGCAC 57 16597267 16597285 TCAAAGGCCAAATAACCGT 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 2 2 2 79 2L 16247175 16247260 ATTAGAGATAAACGACGCGG 58 16247115 16247133 TTTAGTCTCGCCTTTGGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG31822 FBgn0051822 FBtr0080813 2 1 1 78 2L 15836987 15837005 CAGAGCGACAAGTTCAAGG 58 15836833 15836851 ATAGTTGACGATGCCCACC 59 NA DesignNoJunction Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080772,FBtr0080771 1 2 2 229 2L 15750842 15750860 CAAACAGTGGCTGAAGGAC 59 15750561 15750579 ACTTGAAGTAGTAGGCGCC 59 NA DesignNoJunction Drosophila melanogaster 61 Sfp35C FBgn0259965 FBtr0300311 1 1 1 204 2L 15201974 15202046 GTTATTCTGGCCTGTATGCT 57 15201730 15201748 TCTCACAGAACCCAGACAC 59 NA DesignRelaxed Drosophila melanogaster 61 CG42681 FBgn0261567 FBtr0302803 2 1 1 61 2L 14744445 14744519 TGTTTCAGCTTGTACTAGTCAG 58 14744541 14744559 TGATCCTAAGTTGCTGGCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG42586 FBgn0260954 FBtr0301740,FBtr0301741 2 2 2 79 2L 14741706 14741791 TGATCCTCTTCATTGCCCT 58 14741645 14741663 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31775 FBgn0028537 FBtr0301739,FBtr0080691 1 2 2 79 2L 14737635 14737720 TGATCCTCTTCATTGCCCT 58 14737574 14737592 CTGCTGATCACCGAATCCA 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 elB FBgn0004858 FBtr0080636,FBtr0080635 3 2 3 91 2L 14392292 14392310 ACTATGTGAAGGCTCTGCA 58 14391989 14392237 ATTTAACCCAACGGGTGGA 59 NA Drosophila melanogaster 61 CG31846 FBgn0051846 FBtr0080504 1 1 1 176 2L 13462118 13462136 GCAGGGAAATTCGTATCGT 58 13483522 13483540 TTCCAATTCATGGCGTTCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Tehao FBgn0026760 FBtr0080502 3 1 1 70 2L 13436778 13437924 CTGACTAACTTGTCGAGCA 57 13437958 13437976 GAGTTCTTGTTCAGACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 CG16825 FBgn0032503 FBtr0080463 2 1 1 60 2L 13306894 13306913 TGTAACCTATAGCTCCACGA 57 13306935 13306954 GAACGGACTATCACTCACAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG16812 FBgn0032488 FBtr0080445 2 1 1 88 2L 13223853 13223871 GGAAATCGTTCCCGAATCG 59 13223922 13223999 GTTTGGATACCATTCCGAGC 59 NA Drosophila melanogaster 61 Ski6 FBgn0032487 FBtr0080483 3 1 1 60 2L 13221592 13221610 CGATCACTTGGAAACCGTC 59 13221550 13221568 AATGTCCCTTATTTCGCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5439 FBgn0032476 FBtr0080435 3 1 1 60 2L 13178608 13178626 CACTGCTTAAGACCCATCC 57 13178650 13178668 CCGAAATGCTTCTTTGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5142 FBgn0032470 FBtr0301366 1 1 1 80 2L 13108612 13108901 CAGCATTCGGATGATATCATGTC 59 13108937 13108959 GTTCTGGAATGTCATGATGTAGG 59 NA Drosophila melanogaster 61 CG12253 FBgn0026148 FBtr0080149 2 1 1 98 2L 10988895 10988913 CAGGGTTCCCATGGATCTG 59 10988973 10989059 CTGTTCCGTATCAATGCTTGG 59 NA Drosophila melanogaster 61 CG18561 FBgn0032301 FBtr0080190 2 1 1 60 2L 10792562 10792580 GTCAACGTACCACGTTCAG 58 10792520 10792538 AGAAGCTGATGCAGAAGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6724 FBgn0032298 FBtr0080191 1 1 1 80 2L 10768689 10768708 GAATCGGCTGATACTGACTG 58 10768561 10768646 CTTACCACTGATCCCTGGT 58 NA Drosophila melanogaster 61 CG7294 FBgn0032284 FBtr0080128 2 1 1 64 2L 10689175 10689195 TGAAGACTCTGATTGTTCTCG 57 10689131 10689150 GAATCCAAATTGCGGTAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7329 FBgn0032271 FBtr0080131 2 1 1 96 2L 10630792 10630879 CCTGAATACGATACAACTACTGG 58 10630718 10630737 TATGCGATGAAGGGTAAGGA 58 NA Drosophila melanogaster 61 rho-5 FBgn0041723 FBtr0089855 2 1 1 91 2L 10369520 10369599 TGCTCTCAGATATCGTGCC 59 10369447 10369467 GAAGTGAGCAATCGGTATAGC 59 NA Drosophila melanogaster 61 CG5385 FBgn0032215 FBtr0080062 2 1 1 169 2L 10312031 10312052 AGTAATGATTCAGGAACAGCAG 58 10311769 10311901 TTTGAGGGTTCACCATCGA 59 NA Drosophila melanogaster 61 obst-B FBgn0027600 FBtr0079934 1 1 1 87 2L 10038539 10038557 GAAACGGATGCAAACTGGG 59 10038608 10038704 TACCAGTCGGCACAATCTG 59 NA Drosophila melanogaster 61 Trp1 FBgn0011584 FBtr0079932,FBtr0079931 2 2 2 88 2L 10011894 10012403 GGATTCCAAAGCTGGAACG 59 10012449 10012473 GGACTTCACTTGAACTGATTATCTC 59 NA Drosophila melanogaster 61 nAcRalpha-30D FBgn0032151 FBtr0079913,FBtr0079916,FBtr0079912,FBtr0079914,FBtr0079915 2 5 6 87 2L 9809281 9809300 GATAGACATCACGTGGTTCC 58 9807949 9809234 CAAATCCAACTGATTTCCATCG 58 NA Drosophila melanogaster 61 CG13116 FBgn0032139 FBtr0079863 3 1 1 60 2L 9730319 9730339 GAGAATATCGATGTCGTGGAC 58 9730361 9730379 TCATCTTCGGAGTCGTTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pelo FBgn0011207 FBtr0079847 2 1 1 81 2L 9702054 9702072 GAAACATGTCCTCCAAGCC 59 9702115 9706652 AACGTCTTGGCATCTAAAGAG 59 NA Drosophila melanogaster 61 CG18661 FBgn0040964 FBtr0079763 1 1 1 60 2L 8998150 8998168 GGACAGCTGTTGAAGAAGG 58 8998192 8998210 TACCGTCTTGTGCATATGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9541 FBgn0032083 FBtr0079785 3 1 1 81 2L 8972275 8972366 ATGTTGTTGGCCGTAAATGG 59 8972213 8972232 TGCTCAGTATATCGAGGACG 58 NA Drosophila melanogaster 61 CG9314 FBgn0032061 FBtr0079731 1 1 1 123 2L 8706524 8706606 TGTACATTCAGGTGATGCTC 57 8706690 8706710 CGATCTAGAACAATCTTGCCA 58 NA Drosophila melanogaster 61 Peritrophin-15b FBgn0040958 FBtr0079714 3 1 1 136 2L 8394791 8394879 GAAAGCAGCTTTAGTCCTTCTC 59 8394676 8394694 TTGGATCCCAGAAGTCACG 59 NA DesignRelaxed Drosophila melanogaster 61 MED20 FBgn0013531 FBtr0079544 3 1 1 60 2L 8072129 8072149 GACACCGTGAAACAATACCTG 59 8072089 8072109 CCATAAGAGTCACATGCTTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Wnt10 FBgn0031903 FBtr0079435 1 1 1 82 2L 7369573 7369972 CAAACTTGGCTCTATGGCT 57 7370018 7370036 CAGAGCTCCACTTGATCCT 58 NA Drosophila melanogaster 61 Rat1 FBgn0031868 FBtr0079345 3 1 1 60 2L 6908873 6908891 CGATCTCATCATGTTGGGT 57 6908915 6908933 CTCCTCCCGAATGATTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17376 FBgn0042189 FBtr0079380 1 1 2 119 2L 6800107 6800502 CCCAACTTATCCATGTGGC 58 6800006 6800024 TCCGATCGAGTTGCTAACC 59 NA InUTR Drosophila melanogaster 61 CG42370 FBgn0259716 FBtr0299969 2 1 1 60 2L 6383968 6383987 GATTCGTACTTGCCCATGAG 58 6383927 6383948 CTGTCATAATAAAGACCCACGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9497 FBgn0031800 FBtr0079283 2 1 1 80 2L 6347831 6347851 ACCTATTACGAAGTGCTACCG 59 6347613 6347795 TAGGTAGTGATAAAGTTTAGGTCCG 59 NA Drosophila melanogaster 61 CG13984 FBgn0260452 FBtr0079247 1 1 1 60 2L 6308885 6308903 TTGCAGAATGAGCTGACCA 59 6308927 6308945 GGATCGGTGCTCCATAGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 lid FBgn0031759 FBtr0079231,FBtr0079232 1 2 2 83 2L 5993528 5993546 ATCGATCGCCTTAATGCTG 58 5993337 5993483 AGTTCGCACCTTATTGATACC 58 NA Drosophila melanogaster 61 CG31915 FBgn0051915 FBtr0079099 2 1 1 96 2L 5528437 5528528 TAGCAATTTGGTTGCGCTG 60 5528585 5528606 CTTACGCTGTGATAAAGATCCC 59 NA Drosophila melanogaster 61 CG11926 FBgn0031640 FBtr0077387 2 1 1 87 2L 4851485 4851503 ATCTGAGGAGACTGCTCTC 57 4851554 4851626 ATGTTGTTGGACACCTTGG 58 NA Drosophila melanogaster 61 Ir25a FBgn0031634 FBtr0289979 2 1 1 80 2L 4832845 4832863 ATCGTCAAAGACGAGGAGC 59 4832585 4832802 GAAAGGAGCTTGCACTACAG 59 NA Drosophila melanogaster 61 CG15436 FBgn0031610 FBtr0077442 3 1 1 93 2L 4463779 4463852 TACATCAGGGATAATGGCGG 59 4463907 4463926 AACTCTGGTTCTTCGTCTGG 59 NA InUTR Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089268,FBtr0089271,FBtr0301863 3 6 6 173 2L 4295614 4299078 TATTCCAGAAGACGCCGTG 59 4303360 4303379 TCCGGATAGCTCTCATACCA 59 NA Drosophila melanogaster 61 CG10019 FBgn0031568 FBtr0273188 3 1 1 94 2L 3749488 3749506 TCACTGAAATCGGTGACTG 57 3749564 3749735 GCATTGAGTGCCATTAGGA 57 NA Drosophila melanogaster 61 CG10031 FBgn0031563 FBtr0077544 1 1 1 80 2L 3698756 3698839 AGACTGGTACCAGATCCCA 59 3698694 3698716 GTTGTAGTAGAACCTTTCTAGGC 58 NA Drosophila melanogaster 61 E23 FBgn0020445 FBtr0089981,FBtr0089980,FBtr0089979 2 3 3 82 2L 3336395 3336475 GGGCCCTTAATTCATTCCC 58 3336331 3336350 ATAATAGGCGGATAGTCGGT 57 NA Drosophila melanogaster 61 CG9643 FBgn0031485 FBtr0077675 2 1 1 60 2L 2978694 2978713 GACAGCCTGTTTGTAATCAC 57 2978653 2978671 CAAAGCTATCCACCAGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 1 7 7 80 2L 2963125 2963239 CTGTTAAGGTGATTCGTGATCTG 59 2963278 2963297 CAGCCTCTTCGTAATTCGTC 58 NA Drosophila melanogaster 61 CG9894 FBgn0031453 FBtr0077714,FBtr0077713 1 2 2 97 2L 2753625 2753643 AAGGAATCCGTGAAAGGCA 59 2756051 2756069 TCATCGGAATCTCCATCGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG17239 FBgn0042186 FBtr0077805 2 1 1 60 2L 2252074 2252094 CTCATCGTTCACATTCTTCGG 59 2252034 2252053 CTCGTGTAACAGAACACTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rrp40 FBgn0260648 FBtr0077883 3 1 1 62 2L 1728965 1728983 CACTTCGACACAAGGAACC 58 1729009 1729027 CCGGGATGTACCTTCTCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Or22a FBgn0026398 FBtr0077873 1 1 1 80 2L 1521429 1521569 TTGCTATTGGACTATGTTGACG 59 1521609 1521628 TACAGTACCGATCAGGAGGA 59 NA Drosophila melanogaster 61 CG31659 FBgn0051659 FBtr0077943,FBtr0301010 2 2 2 80 2L 1359514 1359533 AGTCGACGGATTTCATAGAG 57 1359404 1359472 TTACAGTACCAGTTTGGGTG 57 NA Drosophila melanogaster 61 CG5440 FBgn0031331 FBtr0077923 3 1 1 60 2L 1334479 1334499 AAGCTGGACATATTCTTTCCG 58 1334519 1334539 TGCGAAATATAACTACCGGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4887 FBgn0031318 FBtr0077966 2 1 1 80 2L 1175454 1175472 GTCGACTCGATGAATGTGC 59 1175516 1175589 GGTAATGGCCACAACTCTG 58 NA Drosophila melanogaster 61 ppk23 FBgn0030844 FBtr0112998,FBtr0100574,FBtr0074491 1 3 3 80 X 17462412 17462431 GAACCAATTTACACGGAGCA 58 17462283 17462370 GGTCTTAACGTCTTCAGTGG 58 NA Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 2 2 2 80 X 15810037 15810055 AAAGATGCGAACCTTGCTC 58 15810098 15810519 AACATAAAGCCCTCAATCGG 58 NA Drosophila melanogaster 61 CG32598 FBgn0052598 FBtr0073918 3 1 1 71 X 14210364 14210383 AGATTCGCTGAGAAGTTTCG 58 14210312 14210332 AGGTAAATCGACTCCTTACTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1756 FBgn0030303 FBtr0073502 1 1 1 80 X 11369554 11369627 TTTGGTGCCAAAGAAACCC 59 11369671 11369689 ATGATGGTCGATGTCAGGG 59 NA Drosophila melanogaster 61 CG11417 FBgn0024364 FBtr0070212 2 1 1 60 X 1248845 1248865 GAGGATCTAATGGTCATGCTC 58 1248887 1248905 TGACGCTGAGAATGCTACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31139 FBgn0051139 FBtr0084321 2 1 1 86 3R 18574661 18574679 CCCTAATCCTCTCCTGCAC 59 18574538 18574614 CGTAGCTGGTATTTGAGTTTGG 59 NA Drosophila melanogaster 61 CG33110 FBgn0053110 FBtr0084264 2 1 1 80 3R 18398298 18398398 GTTCTACGAGCACCTAATGG 58 18398440 18398459 CTGGGACTATCGGAGTAGTC 58 NA Drosophila melanogaster 61 Ir92a FBgn0038789 FBtr0113253 1 1 1 80 3R 16168345 16168364 CAGGAAGCTCGAGAAATCCA 59 16168405 16168488 AAACGATCAAAGCTCAGAGGA 59 NA Drosophila melanogaster 61 CG31321 FBgn0051321 FBtr0082926 3 1 1 81 3R 10138337 10138355 TGTTCGTCACTGGAGTTCC 59 10138400 10138484 GCAAAGGACCATGTGTAGC 59 NA Drosophila melanogaster 61 CG3061 FBgn0038195 FBtr0082869 1 1 1 80 3R 9860040 9860114 GAATTATCGCGACTCAATGCT 59 9860156 9860174 GTATTGATGTTCTGCGCCT 58 NA Drosophila melanogaster 61 CG8319 FBgn0037722 FBtr0082077 1 1 1 106 3R 5453535 5453553 CTGGCAGACAGCTAAGGAG 59 5453623 5453702 GCTGTGAACCTTCATGTGG 59 NA Drosophila melanogaster 61 CG31460 FBgn0051460 FBtr0081873 3 1 1 105 3R 4388600 4388677 GTAATATGTCCGCTTCAGTGAG 59 4388743 4388761 CATTCTGAGCAGAAACGCA 58 NA InUTR Drosophila melanogaster 61 CR32205 FBgn0052205 FBtr0075000 3 1 1 162 3L 19416412 19416487 TTTAAATCCGACGTCCTTGTC 58 19416270 19416289 ATAACCTGATAACTGGCAGC 57 NA Drosophila melanogaster 61 CG42571 FBgn0260777 FBtr0301332 1 1 1 81 3L 15709673 15709693 CAAACTTACGGATCCCTTGTG 59 15709736 15709809 TACGACCACTTTCCACCAG 59 NA Drosophila melanogaster 61 Sras FBgn0029121 FBtr0077083 1 1 1 101 3L 5557274 5557295 AGGCTGTTGTTATACCATACAG 58 5557356 5557434 AGTCCAGATCGAAGTAGGAG 58 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0113144,FBtr0273231,FBtr0077140,FBtr0077139 1 4 10 90 3L 5538128 5538146 ACCGTCGTCTAATTCTCGA 58 5537032 5538078 CCATACCTATAGGCATTTGTGTC 59 NA Drosophila melanogaster 61 Dpy-30L2 FBgn0035491 FBtr0073281 2 1 1 82 3L 4047445 4047600 AAATAAAGCCCAACAATGCC 57 4047382 4047400 GAGTTGGAGTCGTTCTTGG 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG30085 FBgn0050085 FBtr0087306 1 1 1 106 2R 11756316 11756422 GCATTATTGCAACATGATCGAC 59 11756231 11756249 TATCTCCCAGCCAGAACTC 58 NA Drosophila melanogaster 61 CG30002 FBgn0260474 FBtr0302050,FBtr0088466 1 2 2 116 2R 5592148 5592169 TCATATCGCAAGTGACTTAGAG 57 5592299 5592384 ACTCTAATCTCCTTAGATCGGG 58 NA Drosophila melanogaster 61 CG8713 FBgn0033257 FBtr0088780 1 1 1 80 2R 3983869 3983890 GAGCTACTTCTGCCTTATATCG 58 3983931 3984053 CTGTCGGCAGTTATCACAC 58 NA Drosophila melanogaster 61 Nhe2 FBgn0040297 FBtr0081467,FBtr0299912,FBtr0299908,FBtr0081466,FBtr0299911,FBtr0299909,FBtr0299910 2 7 7 80 2L 21119887 21119906 ATACACGTGAACGAGATCCT 58 21119949 21120074 GTGGTACATCACAACCGTG 58 NA Drosophila melanogaster 61 CG17322 FBgn0027070 FBtr0081107,FBtr0081105,FBtr0081108,FBtr0081106 2 4 4 104 2L 18827250 18827520 TAGCTTAGAGGACTTCGAACG 59 18827586 18827604 CTGTGCAGTGTGGTATTGC 59 NA Drosophila melanogaster 61 CG31810 FBgn0051810 FBtr0080925 2 1 1 60 2L 16849255 16849407 TCATGGATTACAGTACGCCT 58 16849214 16849235 TCCGAAGTAAGTACGAATATCC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG34165 FBgn0085194 FBtr0112356 1 1 1 94 2L 14714011 14714029 GATTTGAAGGTGGTCTGCA 58 14714087 14714105 GAAGATGACACCCTCCTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7154 FBgn0031947 FBtr0079488 1 1 1 60 2L 7783043 7783313 ATGAAGAATACAGTCAGCACC 58 7783333 7783353 AGGATAAGCTTTAGACCTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 ed FBgn0000547 FBtr0077465 3 1 1 82 2L 4074701 4079510 TTCCGGCTATAGACTCGAC 58 4079553 4079574 CATTGTCACGGTTATAGGACAC 59 NA Drosophila melanogaster 61 CG33125 FBgn0053125 FBtr0302456 2 1 1 63 2L 2652060 2652138 GTTTGCAATGGAAAGCGAC 58 2652015 2652034 TCACACTCTCCGTAATTGGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG14342 FBgn0031324 FBtr0114498 3 1 1 90 2L 1204607 1204625 ATACAACGAGTGTTTCCGC 59 1204679 1204772 GGCAAAGGTTCTGTGTACC 59 NA Drosophila melanogaster 61 CG33992 FBgn0045202 FBtr0100045 3 1 1 60 2L 327805 327823 ATACATGGAGTGCAAGGAC 57 327763 327784 CTGGATTGGATCACACTTATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42399 FBgn0259818 FBtr0301929 2 1 1 80 2L 145902 147360 CATCAAGTCAGTGGATACCGA 59 145842 145863 GAATAGCTAGTAGAACTTGCGG 58 NA Drosophila melanogaster 61 th FBgn0260635 FBtr0075499 3 1 3 106 3L 16033154 16043567 AATGTCTCTGTTTCGACTTCAG 58 16033069 16033087 TCAGCTACAACAGATGCCA 59 NA InUTR Drosophila melanogaster 61 SKIP FBgn0051163 FBtr0084197,FBtr0301028 2 2 2 80 3R 18113617 18113635 TAGAGGTCTTATCGTGCCG 58 18113679 18115216 TCGCGATCATGAGATCTGG 59 NA Drosophila melanogaster 61 CG8708 FBgn0033271 FBtr0088809,FBtr0088808 2 2 2 60 2R 4048432 4048553 TCCCTGCTAACAGAAGCTC 59 4048390 4048411 AACCAGCAATCAAGGTAAACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582,FBtr0114583,FBtr0112577 1 5 5 187 3R 5756091 5756110 CATTGAGCTGAAGAAGCGAC 59 5756260 5769213 GTTTCCGGGAATTGTGCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG9399 FBgn0037715 FBtr0082109,FBtr0082110,FBtr0302332 1 3 3 88 3R 5399131 5399149 GTACAACGGGATGATTGGC 59 5398997 5399079 ATATCGTCTTGGGACCAGC 59 NA Drosophila melanogaster 61 snoRNA:Psi18S-996 FBgn0083014 FBtr0113599 2 1 1 60 3L 261891 261909 ATCGTCGTGCTGTTTACTG 58 261849 261868 AAGTTCTTGGAATCCGTCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ecd FBgn0000543 FBtr0072903 2 1 1 89 3L 2265516 2265534 TGAACGAGGAGACAAACCC 59 2265372 2265390 TGATGTTGTCGCCATAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG16970 FBgn0032504 FBtr0080476,FBtr0302309 2 2 2 60 2L 13309564 13309650 AATCTAGCCAGCTGGTACC 58 13309522 13309543 TGGTGGTTCCAATATAGATGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG3902 FBgn0036824 FBtr0075076 2 1 1 73 3L 18887924 18891051 GGAGACTGTTGCCAAACTG 59 18887869 18887888 CGAATTTGTGCTCAAAGTCC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 mrj FBgn0034091 FBtr0087193,FBtr0087196,FBtr0087194,FBtr0113084,FBtr0087195 3 5 5 83 2R 12093319 12093421 GTGAAGTGAAGAAGGCATATCG 59 12093257 12093275 GTTTGTTGGCCTCATCCAG 59 NA Drosophila melanogaster 61 CG6356 FBgn0039178 FBtr0084601 3 1 1 80 3R 20112883 20112965 TCTGAACTGCTACCTGATGAG 59 20113005 20113025 AAGAGAATCTTGTAGACGCGA 59 NA Drosophila melanogaster 61 Ca-alpha1D FBgn0001991 FBtr0090003,FBtr0090006,FBtr0090004,FBtr0090005 3 4 4 80 2L 16174457 16174477 TTGATGTTAAGGCCTTACGTG 58 16174519 16174869 GCACAACCTGTAGACTTGG 58 NA Drosophila melanogaster 61 sn FBgn0003447 FBtr0301676,FBtr0071101,FBtr0301678,FBtr0301679,FBtr0301677,FBtr0071102 2 6 6 81 X 7879381 7879476 CTGCATAAGATCGCAGCAG 59 7879521 7879539 CGAATCGGTTCCATCATCC 58 NA Drosophila melanogaster 61 skpD FBgn0026174 FBtr0074796 2 1 1 60 X 19707131 19707152 CCCATCTTGTTCGAAATTACAG 57 19707170 19707191 GATCCTCTAGGCCCTTAATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 car FBgn0000257 FBtr0074727,FBtr0074728 3 2 2 144 X 19461708 19461726 AACTGGTCCATGTGTACGG 59 19461955 19461974 ATTTCAACGTTGTCGTCCAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG8034 FBgn0031011 FBtr0301226,FBtr0074684 3 2 2 96 X 19177103 19177122 TATTGCTCACTGGAGAAGCT 58 19176960 19177044 GAATGAGACCAATGAGCGG 58 NA Drosophila melanogaster 61 Frq1 FBgn0030897 FBtr0074545,FBtr0100239 3 2 2 81 X 18055280 18055301 AAGTTGAAACAGGATACCATCG 58 18061682 18061828 ATCCTTTGTGCCATTGACG 58 NA Drosophila melanogaster 61 CG13003 FBgn0030798 FBtr0300431,FBtr0074349 2 2 2 106 X 16741015 16741035 ACAGCTTCTTAGAAGCAACCT 59 16740614 16740632 TGTAGTTCACCATGGGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 mmd FBgn0259110 FBtr0299534,FBtr0299536,FBtr0299535 1 3 3 80 X 15856480 15856583 GGAATTTGAATGCAAGGCGA 59 15856419 15856437 GGAGTTCCGTCCTTAACCA 59 NA Drosophila melanogaster 61 CG8260 FBgn0030684 FBtr0074088,FBtr0074089 3 2 2 84 X 15651250 15651353 ATATCTATACGACGTTCGAGC 57 15651397 15651417 TGAACTTCTTTAGCATGAGGG 58 NA Drosophila melanogaster 61 Fbxl4 FBgn0030555 FBtr0073923 3 1 1 80 X 14129631 14129704 TAATCTGATAGAGTTGAGCCTG 57 14129572 14129590 TTCTTGAGATTGGCCAGAC 57 NA Drosophila melanogaster 61 CG12480 FBgn0030537 FBtr0073868 1 1 1 60 X 14065422 14065440 AGCTACTCCAAATCCGTCC 59 14065462 14065482 CTTAGTAAATATAGCCGCCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sofe FBgn0030242 FBtr0073409 1 1 1 60 X 10750677 10750698 GCGGATAACCATAAGCTTACTC 59 10750638 10750659 ACTCTTTGTCCATTTCTTGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(1)G0320 FBgn0028327 FBtr0071372 3 1 1 168 X 9447524 9447544 GGCATCTGATGTTCCTAATGC 59 9446708 9446726 CTATCCTCGTCCGCTTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 3 4 4 81 X 8459190 8459423 GATACTGGGTCGAATCATTCAC 59 8459463 8459483 CACCAGATGTTCGAAGTTCTC 59 NA Drosophila melanogaster 61 l(1)G0193 FBgn0027280 FBtr0071130 1 1 2 80 X 7838002 7838020 AATCACTACGAATGGTCGC 58 7837870 7837959 GACAAAGGTGTCCTTGTAGG 58 NA Drosophila melanogaster 61 COQ7 FBgn0029502 FBtr0070963 1 1 1 168 X 6665399 6666272 AGCAATGAATGGAATGCTGAG 59 6666402 6666420 AATCTCATCTGTGAGCGCA 59 NA InUTR Drosophila melanogaster 61 CG15771 FBgn0029801 FBtr0070809,FBtr0070810 2 2 2 72 X 5652363 5652438 CTGGAGACCGACATCAAGG 59 5652474 5652492 TGCTATTGCTTAGTGGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6379 FBgn0029693 FBtr0070671 3 1 1 94 X 3994031 3994053 CTTCTCTATTTCACGGACATGTG 59 3993858 3993876 GTGAAGCCGAATCCTTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 ng2 FBgn0010294 FBtr0070540 1 1 1 80 X 3134302 3134320 AGAGGCCAAAGAAGGTCAG 59 3134240 3134258 ATCTGCGGTTTCTACTGCT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp4d2 FBgn0011576 FBtr0070387 2 1 1 84 X 2072304 2072378 GTGGAAATACGTGGCAAGC 59 2072425 2072444 CGAAGTACTCAGGATCACGA 59 NA Drosophila melanogaster 61 CG11448 FBgn0024985 FBtr0070225 3 1 1 124 X 1288078 1288098 GCTCTTTCGGATACTCAAGTG 58 1288183 1288267 TGGATATTGAGGTGCTCCAG 59 NA Drosophila melanogaster 61 CR41571 FBgn0085804 FBtr0114258 3 1 1 60 U 5607725 5607745 CGATCAATTCAAGGACTACGA 58 5607685 5607704 TTCGTTTAGACATATGCGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40640 FBgn0085759 FBtr0114209 2 1 1 62 U 9660685 9660703 GAAATTCAAGTATGCGCGG 57 9660729 9660747 GATGACGAGGCCTTAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR40640 FBgn0085759 FBtr0114209 1 1 1 61 U 9660686 9660704 AAATTCAAGTATGCGCGGG 59 9660729 9660747 GATGACGAGGCCTTAAGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40948 FBgn0085541 FBtr0302240 3 1 1 60 U 8664470 8664494 CTAGATGAAGATACTAGACACATGG 58 8664434 8664455 CTTGAATAAGTCCAATGCTCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40378 FBgn0058378 FBtr0302337 1 1 1 80 U 72383 72403 TCGTGTACAGATAAACGACTC 57 72443 72737 TCTAAATATCCGGAAAGGCTC 57 NA Drosophila melanogaster 61 Eph FBgn0025936 FBtr0089085,FBtr0089082,FBtr0301285,FBtr0089083,FBtr0089084,FBtr0089086 3 6 6 80 4 639091 639170 AAGCTATTATCGGAGGTGGAG 59 639209 639230 CAATGTCCTGTACAAAGTTTGG 58 NA Drosophila melanogaster 61 snoRNA:Psi18S-1377e FBgn0083047 FBtr0113594 2 1 1 60 3R 26032799 26032817 TCTGGACGTTGTTCAAGTC 57 26032757 26032778 GTGATTCGTTGCATTACTTTGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tRNA:CR31485:Psi FBgn0051485 FBtr0081662 2 1 1 60 3R 2645030 2645050 CTTAGTTGGTAAAGCGTTGGA 58 2644990 2645009 TCTGAGCATGAACTTGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CR31541 FBgn0037309 FBtr0078783 3 1 1 60 3R 1094814 1094835 TAACTTTGCTGTTAACTCGACC 59 1094856 1094874 ACCGAAGTTGTAGTAGCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 2 3 3 77 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215048 26215434 TTACAAATGGAGTTGGCCG 58 NA DesignRelaxed Drosophila melanogaster 61 CG42592 FBgn0260969 FBtr0301747 2 1 1 68 3R 25661709 25661727 ATCGAGTTCTCCACATCCG 59 25661659 25661677 TAGCAACCTAGTCAGCTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 woc FBgn0010328 FBtr0112857,FBtr0085178 3 2 2 82 3R 23083856 23083874 TACTACGAGCGGTTTACCG 59 23083728 23083812 GTGACAATGTATTGCGAATCG 58 NA Drosophila melanogaster 61 ro FBgn0003267 FBtr0085090,FBtr0085091 3 2 2 122 3R 22702878 22703271 CACTACAGAAACTTTGTCGTGG 59 22702777 22702796 ATAGTAGTTTAGGCCCACGC 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 2 5 5 101 3R 19824626 19824644 ATAAGGAGCGTGATCTCGA 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 CG13601 FBgn0039126 FBtr0084522 2 1 1 80 3R 19753198 19753217 ACGTGATTAAGTCCAATGCC 58 19753082 19753155 CCCAGTTGTAGAACTGTGC 58 NA Drosophila melanogaster 61 CG17244 FBgn0039031 FBtr0084340 1 1 1 67 3R 18803198 18803216 GAAATCCCGAAGGACTGTG 58 18803247 18803265 TTTGGAGCCTGAACATTCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6660 FBgn0039030 FBtr0084338 2 1 1 98 3R 18749490 18749508 GATCACACGGACAGATCAC 58 18749570 18749650 TATGAATACCGTGTCGAGC 57 NA Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267,FBtr0113268 1 2 2 80 3R 18555589 18555675 GAACTAACCATGGCCAATCG 59 18555717 18555736 AAATAGAAAGATGGCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 oa2 FBgn0038980 FBtr0100322,FBtr0301484,FBtr0084260 3 3 3 81 3R 18338653 18338819 GTCGACAGATACTACGCCA 59 18338862 18338882 TCAATAGCATGATGAACACGC 59 NA Drosophila melanogaster 61 CG7071 FBgn0260467 FBtr0084211,FBtr0084212 1 2 2 113 3R 18189835 18189928 CTATCAGCTATCAGATTAAGAGCCT 59 18189999 18190017 CCACCATCAAATTGACGCC 59 NA Nonspecific Drosophila melanogaster 61 Gr93b FBgn0045470 FBtr0290236 3 1 1 79 3R 17668464 17668483 TGATAGCCAGAGTTACCACC 58 17668347 17668365 CCAAAGGAAACACTCGCAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4836 FBgn0038762 FBtr0083826,FBtr0273258 1 2 5 150 3R 15842347 15842365 ATTAAGGAGCGAACGGGAC 59 15842475 15842565 GTCAAGAGATTGCCTATTCATCC 59 NA InUTR Drosophila melanogaster 61 CG31221 FBgn0051221 FBtr0083762,FBtr0083763 1 2 2 114 3R 15279889 15279907 TGATGCCCTTTCACCTCTC 59 15279985 15282857 GTGTTCCAGGTCCGATCTC 59 NA Drosophila melanogaster 61 Muc91C FBgn0038642 FBtr0083687 1 1 1 60 3R 14518353 14518371 TTTCTGTGGTGGCTTTGTC 58 14518088 14518329 ACTACACTGCTGCTCTTCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7794 FBgn0038565 FBtr0083540 1 1 1 80 3R 13849686 13849704 TGAGTTCACCAGCCATCAG 59 13849745 13849824 CGGATTTCATCTATCACTGTGG 59 NA Drosophila melanogaster 61 tara FBgn0040071 FBtr0083258 2 1 2 231 3R 12069042 12082508 GTGCACTGAGGTGAATTCC 58 12082703 12082721 GTTGTTGGACTCAACAGCT 58 NA DesignRelaxed Drosophila melanogaster 61 CG34275 FBgn0085304 FBtr0112470 3 1 1 150 3R 11738553 11738571 CTTTGTCAAGGAGACGTCG 58 11738149 11738439 CTGCTTCTCCAGATTGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG14877 FBgn0038380 FBtr0083249 1 1 1 80 3R 11715363 11715481 CGATTATTCCTTGGCTGCA 58 11715301 11715322 GAACCTCCAACTGATATGAGTG 58 NA Drosophila melanogaster 61 CG9925 FBgn0038191 FBtr0082876 3 1 1 81 3R 9787986 9788004 TAGTGATGTTTCCGTTGGC 58 9787858 9787943 ATCCTTACTCAATATCTCGCC 57 NA Drosophila melanogaster 61 Art6 FBgn0038189 FBtr0082878 3 1 1 115 3R 9771190 9771211 CAATCAGAAGGAGAATGTGGTG 59 9771038 9771114 ACAGAGCATTTCCCATCCA 59 NA Drosophila melanogaster 61 Adgf-D FBgn0038172 FBtr0082845 2 1 1 80 3R 9531020 9531039 GGTTTCTAGGTGCTTTGGTG 59 9530526 9530982 TCAGTGTTTCATAGGGTAGATCTG 59 NA Drosophila melanogaster 61 Hsp70Bb FBgn0013278 FBtr0082637 1 1 1 70 3R 8333115 8333133 ATTGGGCACATTCGATCTG 58 8333165 8333185 CGAAGGTTACTTCTATCTGGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10038 FBgn0038013 FBtr0082614,FBtr0082615 1 2 2 177 3R 8175695 8175925 CTAGCCAACCAAATCCCAG 58 8175536 8175555 CTTTAACGTATCCACTGCCA 58 NA Drosophila melanogaster 61 svp FBgn0003651 FBtr0082564,FBtr0082563 1 2 3 91 3R 8107958 8115935 ATTTACCTGCGAAGGTTGC 58 8115989 8116008 CTATGGGACAGTTTCTGCTG 58 NA Drosophila melanogaster 61 Irbp FBgn0011774 FBtr0082385 3 1 1 80 3R 7236524 7236788 TGTCAAGAGCTATCGAACTG 57 7236831 7236849 TCAACTTACGATCGGACAG 57 NA Drosophila melanogaster 61 CG4706 FBgn0037862 FBtr0082336 1 1 1 60 3R 6963736 6963754 GTTAAAGGAGGTACGGGTG 57 6963777 6963796 AGGAAATAGATTCGACGCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9386 FBgn0037708 FBtr0082115 1 1 1 265 3R 5381090 5381108 GCAGCAGTAGAAGAAGCAC 58 5380782 5380861 AAATCCACAATTCCGGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Rlc1 FBgn0014023 FBtr0082120,FBtr0082121 2 2 2 143 3R 5341243 5341261 GAGCTGCGTATCAAGTCCA 59 5341067 5341136 TTTCACCTTATCGATGCGC 58 NA DesignNoJunction Drosophila melanogaster 61 ird1 FBgn0260935 FBtr0081986,FBtr0301246 3 2 2 80 3R 5071306 5071385 AGTTCCAATATGGGCAGCA 59 5071244 5071265 AAACACCTTGACCACTATTTGC 59 NA Drosophila melanogaster 61 Cyp313b1 FBgn0037601 FBtr0081893 3 1 1 81 3R 4470116 4470200 TATAGAACAGCTTCTCGAACCC 59 4470056 4470074 CATCTCCATTTCGGATCGC 58 NA Drosophila melanogaster 61 Neurochondrin FBgn0037447 FBtr0081729 1 1 1 60 3R 2294915 2294935 TTGTTAAGCAGTTTGGAGTGG 59 2294957 2294975 ATCAGAGCATGGAAGGCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1172 FBgn0037321 FBtr0078792 1 1 1 80 3R 1220386 1220406 AGGGTCTTGACTTTCAGATGG 59 1220447 1221261 AGCATTCTGTAAGGTAGCCA 58 NA Drosophila melanogaster 61 DhpD FBgn0261436 FBtr0078986 3 1 1 105 3R 53802 53877 CGAATAAGACTGTACTGGCTC 58 53717 53735 ATTGTGTTCGAAGTGGGAC 58 NA Drosophila melanogaster 61 Ssl1 FBgn0037202 FBtr0078554 2 1 1 102 3L 22872484 22872502 GAGGACCAGAAGGAGTACC 58 22872621 22872639 TGATCTCTGCAATGGCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 Hr78 FBgn0015239 FBtr0078392,FBtr0078390,FBtr0078389,FBtr0078391 3 4 4 80 3L 21488575 21488712 AACGCAGACATTGATGTTCG 59 21488514 21488532 TCTGGCGAATAGCTACCAC 59 NA Drosophila melanogaster 61 Syx7 FBgn0086377 FBtr0078352,FBtr0078351 1 2 2 81 3L 21439404 21439425 GCCTAAGCGAAATAGATTTCCA 59 21439467 21439552 ATCGTGGACACATTCTGCT 59 NA Drosophila melanogaster 61 Sfp77F FBgn0259972 FBtr0300317 3 1 1 82 3L 20890466 20890487 CGTGTTAATTTGCTTACTAGCG 58 20890348 20890425 TGGTTTCCTCACAAAGAAGTG 58 NA Drosophila melanogaster 61 CG8765 FBgn0036900 FBtr0089598,FBtr0089597 3 2 2 85 3L 19678982 19679066 AGAAGTCGGTGAAACAGTG 57 19678915 19678933 CATCAGTGTCCTCAATCGC 58 NA Drosophila melanogaster 61 CG14088 FBgn0036858 FBtr0075016 1 1 1 60 3L 19263408 19263429 TCAGTAACGCCAACTTTAATCC 59 19263369 19263387 AGCAGTTTCATTAGGCCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10419 FBgn0036850 FBtr0075032 1 1 1 111 3L 19093097 19093166 GATGTTGGACAATCCCGAG 58 19093004 19093022 AAGAACTAGGACCTGGGAG 57 NA Drosophila melanogaster 61 MESR6 FBgn0036846 FBtr0075026 1 1 1 85 3L 19086413 19086775 TTATGCAGGACATTTCAACCG 59 19086821 19086840 CAACCTTAAAGTCGTGCCTG 59 NA Drosophila melanogaster 61 CG18136 FBgn0036839 FBtr0075040 1 1 1 92 3L 18994613 18994632 TCCATGAGACCAATACCCAC 59 18994484 18994559 CAGAAAGTTCCTCCATTGCG 59 NA Drosophila melanogaster 61 CG6852 FBgn0036820 FBtr0114591,FBtr0075063 2 2 2 91 3L 18862847 18862865 TCGATGGAAATCCCGATGG 59 18862984 18863003 TTTGCCATCGATAAAGACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32191 FBgn0052191 FBtr0075168 2 1 1 96 3L 17800861 17800949 ATATGCAGCGATGATCTCCA 59 17800784 17800807 GAAGATCACTATGCTATTCTCCAG 58 NA Drosophila melanogaster 61 Adgf-A FBgn0036752 FBtr0075190,FBtr0075191 3 2 2 84 3L 17746620 17746638 TACTACAAAGCGCTGGAGG 59 17746405 17746573 CCATGTCATATAGCGTGGGA 59 NA Drosophila melanogaster 61 CG13035 FBgn0036628 FBtr0075414,FBtr0075415 3 2 2 80 3L 16392306 16392325 AAAGGTCGAAATTCCGAGGA 59 16392176 16392264 AAGGAGATCAGCGAGTTCTG 59 NA Drosophila melanogaster 61 yellow-k FBgn0036504 FBtr0075556 2 1 1 60 3L 15514410 15514430 GATCTATACAGTACGGTGGAC 57 15514452 15514470 GTTTGCTTGCTAATTCGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7768 FBgn0036415 FBtr0075736,FBtr0075737 1 2 2 60 3L 14211842 14211863 ATGGCTGGATAATAAGCATGTC 58 14211883 14211902 CTGGACGATATCCATTCCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776,FBtr0075775,FBtr0114573 2 3 3 80 3L 14060632 14060721 TAAGAAACATTGCAATCTCCCG 59 14060760 14060780 TCAGGTCCAGACTATGAATGG 59 NA Drosophila melanogaster 61 JIL-1 FBgn0020412 FBtr0076236,FBtr0076237 1 2 2 80 3L 11075673 11075691 GAGCATTTGGAGCAGATGC 59 11075550 11075633 CCGACAAGGTATATTCTGAAGTC 58 NA Drosophila melanogaster 61 CG12523 FBgn0036102 FBtr0076266 2 1 1 72 3L 10794671 10794689 CAAGATCATCTCGCAGCAG 58 10794725 10794743 ATATCCTCCAGACGAACCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32064 FBgn0052064 FBtr0076288 3 1 1 60 3L 10484826 10484844 GACTATGAAGGTTGGACCC 57 10484868 10484886 TCCTGCGAGCTAAATTCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32063 FBgn0045770 FBtr0076286 1 1 1 81 3L 10458431 10458449 CTTGAGTTCTCCATTGGCA 57 10458493 10459286 AACAGCAAGTCGAAACAGTG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Klp67A FBgn0004379 FBtr0076499 2 1 1 93 3L 9359647 9359668 CGACAGGGTATTCGATATAGAC 57 9359508 9359596 GCAGTTGTATCCATTTAACACC 58 NA Drosophila melanogaster 61 CG32369 FBgn0052369 FBtr0076784,FBtr0076783 3 2 2 98 3L 7774095 7774116 CGAAGTTCTTCTTAAACTGAGC 57 7773960 7774036 CTTAAGTAGTGGGCCTTGG 57 NA Drosophila melanogaster 61 sphinx1 FBgn0052383 FBtr0300363 1 1 1 80 3L 7431795 7431813 TCCTTCGGTACACATACGC 59 7431663 7431755 GTACATCCTTGTTAGAATCCCAC 59 NA InUTR Drosophila melanogaster 61 Cpr65Ax2 FBgn0042118 FBtr0077022 2 1 1 87 3L 6143720 6143808 TCATATGCAGTTGAAACCAGC 59 6143653 6143671 TTGAGATGGCCTCTAGCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Acp63F FBgn0015585 FBtr0073182 1 1 1 80 3L 3816141 3816161 GGTCCAAATCCAAGTTACCTC 58 3816027 3816103 GGGAATTAGTTCGATGAATCCTG 59 NA Drosophila melanogaster 61 CG13806 FBgn0035325 FBtr0072879 3 1 1 189 3L 2266521 2266611 TAGTGAGCGTGTTACTGCT 59 2266763 2266782 GATTCCACGGGAATGTTCAC 59 NA Drosophila melanogaster 61 CG1275 FBgn0035321 FBtr0072905,FBtr0072907,FBtr0072908,FBtr0072906 2 4 4 71 3L 2253685 2253789 CTGTATGGCAACTCCATTCTG 59 2253634 2253652 GTGGGTAAGCTTCAGAGTC 57 NA DesignRelaxed Drosophila melanogaster 61 CG5690 FBgn0035295 FBtr0072842 1 1 1 80 3L 1949229 1949314 CTAACTGAAACTGAGACCAATCTC 59 1949350 1949371 CATTTGCTGTTGGTAGTATTGC 58 NA Drosophila melanogaster 61 nerfin-1 FBgn0028999 FBtr0072592 2 1 1 60 3L 909454 909473 CGCAGTCGATATCTGAACCT 60 909496 909514 GCTTCAGCGTTAGATCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13907 FBgn0035173 FBtr0072593 3 1 1 60 3L 878892 878911 ACCATGTCCATATTCTTCGG 57 878851 878870 GGATAATTGACGTCAGCGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33356 FBgn0053356 FBtr0086348 2 1 1 74 2R 15652639 15652657 TACCACGCTGAATACATCG 57 15652583 15652601 GTATTAAACGCGTACGAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA-Psi:CR33371 FBgn0053371 FBtr0086363 3 1 1 60 2R 15647047 15647065 ATTAAACATCTTCCGGCGC 59 15647005 15647025 CGATTCAGTAATCCCTAGTGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3570 FBgn0035035 FBtr0072317 3 1 1 65 2R 20491422 20491440 TACTTCTTTACCGAGGGCA 58 20491469 20491487 GTAGGATTCCAGGAGTCGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 IFa FBgn0053527 FBtr0091490 1 1 1 60 2R 20465318 20465337 CCAGAACGACAGCAAATAGG 59 20465277 20465295 GCTCGAGATCAGTTCTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Crtp FBgn0029501 FBtr0072299 2 1 1 91 2R 20382909 20382979 GAGATTGCAGAACACGAGC 59 20383034 20383052 TAGCGACTGTCCAGATTGC 59 NA Drosophila melanogaster 61 CG42383 FBgn0259729 FBtr0299995 2 1 1 60 2R 20311665 20311684 CTCTATCAGTATGCACGCCT 59 20311624 20311642 TCATCAGGACAAAGCTCCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11406 FBgn0034990 FBtr0100169,FBtr0072276 3 2 3 113 2R 20090333 20093343 ATTGGATCGTAGCATCTTGC 58 20090079 20090097 TCGTACTGCTGGAATTTGC 58 NA Drosophila melanogaster 61 CG11388 FBgn0034959 FBtr0072162 3 1 1 60 2R 19910745 19910763 CGGACGGTCATATACACCA 59 19910783 19910805 CTATGTCTTGTATGATGCTGGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 l(2)k09913 FBgn0021979 FBtr0071959,FBtr0071960,FBtr0071958 3 3 4 103 2R 18955644 18958140 CTCCAAATAGTGCCATGGC 59 18958207 18958225 CTCAACTTGGGTCTTGGTG 58 NA Drosophila melanogaster 61 CG3788 FBgn0034800 FBtr0071995 1 1 1 80 2R 18820694 18820713 CCTGACATACTCTACCACCT 58 18820562 18820652 GCATACAAACCTCACATCAC 57 NA Drosophila melanogaster 61 CG30271 FBgn0050271 FBtr0113366,FBtr0300927 1 2 2 80 2R 18706464 18706938 ACAACGAAGATTTCTCGGTG 58 18706981 18706999 AAATACGCGTCAACTTGCC 59 NA Drosophila melanogaster 61 CG42565 FBgn0260767 FBtr0301269 2 1 1 80 2R 18548356 18548581 TGCCTATTCCTATGCTGGC 59 18548625 18548643 GTTGGGACAGTACTGGGAG 59 NA Drosophila melanogaster 61 Mes4 FBgn0034726 FBtr0071827,FBtr0301243 2 2 2 189 2R 18299366 18299384 GCGAGGAACTATTTGAGGC 58 18299537 18299609 TTGTTGCCATTCGTCACTG 59 NA Drosophila melanogaster 61 CG30281 FBgn0050281 FBtr0071760 1 1 1 80 2R 18002743 18002840 CAGTCATGAGACAATTAACCCA 58 18002879 18002899 CCCGGAACTTCAATAACATGG 59 NA Drosophila melanogaster 61 PTP-ER FBgn0016641 FBtr0071686 1 1 1 80 2R 17508770 17508845 TTACATCAAGGGACCCGAC 59 17508708 17508730 CAGAACTCGAAGATTGTATTGGG 59 NA Drosophila melanogaster 61 Rcd6 FBgn0034530 FBtr0086253,FBtr0300698 1 2 2 80 2R 16518233 16518254 ATTATGGAGCGCTTCATAAAGG 59 16517756 16518192 ACCCAGATAGACGATCAGC 58 NA Drosophila melanogaster 61 CG8654 FBgn0034479 FBtr0086340 1 1 1 80 2R 15870543 15870623 GATGACCACCAGTTTCGTC 58 15870666 15870685 GGGATTTGGTAGAGAATGGC 58 NA Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 3 1 1 130 2R 14552803 14552823 CGACGAAGATGAGAAGTTCAG 58 14552636 14552714 GTTCAATTGCCTTAATGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG33136 FBgn0053136 FBtr0086653 2 1 1 98 2R 14552770 14552791 GTCTCAAGTCGACAATATTGCT 58 14552636 14552714 GTTCAATTGCCTTAATGGATGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG5742 FBgn0034304 FBtr0086780 3 1 1 60 2R 14038076 14038095 GTGGACTTCAATGATATGCG 57 14038035 14038055 CCTCACCTCTAAACAAGAACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 MESR4 FBgn0034240 FBtr0113090 3 1 2 134 2R 13435920 13435938 CTGCCGCCTACAAATTGTG 59 13436036 13436405 TTGTTCTTTACGCAGCTGC 59 NA InUTR Drosophila melanogaster 61 CG12699 FBgn0046294 FBtr0300762 2 1 1 200 2R 13134730 13134836 TTTCACCTCCAACAGTCCA 58 13134548 13134566 GATCTCACGGAACTTGACC 58 NA InUTR Drosophila melanogaster 61 Sod2 FBgn0010213 FBtr0087078 1 1 1 89 2R 12661143 12661277 AATTTCGCAAACTGCAAGC 58 12661072 12661090 CAGATGATAGGCTCCAGGG 59 NA DesignNoJunction Drosophila melanogaster 61 Syn2 FBgn0034135 FBtr0087093,FBtr0087095,FBtr0087096,FBtr0087094,FBtr0087097 3 5 5 93 2R 12442332 12442350 CATGGAGTTGCTTTCGCTG 59 12442404 12442484 AACCATACGTTCCTTTGATTCC 59 NA Drosophila melanogaster 61 CG10200 FBgn0033968 FBtr0087444 2 1 2 65 2R 10695976 10696081 TCGTCTTTATCCATACCGC 57 10696110 10696128 GTAATCGCAAACAAAGCGA 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Spred FBgn0020767 FBtr0087468 1 1 1 98 2R 10651636 10651654 AATGTTTCGATCCGGAAGC 58 10651496 10651574 CAAGATGACGCTCTGATCG 58 NA Drosophila melanogaster 61 fl(2)d FBgn0000662 FBtr0087648,FBtr0087647 3 2 2 120 2R 9708864 9708946 GACTATGTGAGCCAAATTGC 57 9708763 9708781 TAAGTTCCTTCTTGAGCCG 57 NA Drosophila melanogaster 61 Ser8 FBgn0019928 FBtr0087664 3 1 1 60 2R 9322048 9322066 AGGCATACAACTCCAACAG 57 9322090 9322108 AGCTTAGTCTTCAGACGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33775 FBgn0053775 FBtr0091776 2 1 1 82 2R 8451989 8452010 CTATATCGTTTCAAGGACTCGT 57 8451870 8451949 AATGTCGTGGTTATATGGACAC 58 NA Drosophila melanogaster 61 CG33012 FBgn0053012 FBtr0087909,FBtr0087910 2 2 2 80 2R 8256396 8256470 TATGATACAGAGGCTCACTCTG 59 8256510 8256529 TGACTCCGTGTAGTAAACGA 58 NA Drosophila melanogaster 61 garz FBgn0033714 FBtr0087898,FBtr0087897 3 2 2 99 2R 8215576 8215657 TAATATCGCTTCTCAGCTCAG 57 8215718 8215736 TGAAACTTGAGATGTCCGC 58 NA Drosophila melanogaster 61 Obp47b FBgn0033614 FBtr0088171 2 1 1 60 2R 7189831 7189854 CTACATGGAGTACTTCAAGAACTG 59 7189794 7189812 AGTACACTGGGCATTTGGA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42600 FBgn0261016 FBtr0301879 2 1 1 80 2R 5484789 5484861 AAAGCTATTTGGTGATTGCG 57 5484728 5484748 GCTCATCTTGTTTGTAGAGTG 57 NA Drosophila melanogaster 61 CG11778 FBgn0033371 FBtr0300173 3 1 1 86 2R 4972032 4972050 CAGACATCACCAGGGTAGC 59 4972098 4972178 GAATAAGAATCCCTGCAAGCG 59 NA Drosophila melanogaster 61 CG34217 FBgn0085246 FBtr0112410 1 1 1 60 2R 4115959 4115977 GGACACCATTCTGAACACC 58 4115917 4115935 CTGCATGTAGATGGTGGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Prosalpha1 FBgn0026781 FBtr0088896,FBtr0088895 1 2 2 119 2R 3715846 3715926 TCTACCAAGTGGAGTACGC 58 3715745 3715763 CGATGTTCTTCTCGGTCAC 58 NA Nonspecific Drosophila melanogaster 61 CG30492 FBgn0050492 FBtr0088917,FBtr0088913,FBtr0113382,FBtr0088916,FBtr0088914,FBtr0088915 2 6 6 93 2R 3527474 3527492 GGAATCCGTGCTTAGTGAC 58 3527548 3527632 GGATCCAATATCATCCTCGG 57 NA Drosophila melanogaster 61 snoRNA:Psi18S-640a FBgn0083026 FBtr0113540 2 1 1 60 2L 20418525 20418545 GGGAGACAAAGTTTACATGCT 59 20418564 20418585 TATATCGGAGCGTTGTAGACAC 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31693 FBgn0051693 FBtr0100262 3 1 2 110 2L 22015389 22015463 GTCAAGATCCGAGCAATCG 58 22015534 22015555 CCATGTAGTGTGACTTTGAGAG 58 NA InUTR Drosophila melanogaster 61 His2A:CG33850 FBgn0053850 FBtr0091854 1 1 1 60 2L 21513888 21513910 CTAGAATTATTCCGCGTCATCTG 59 21513929 21513948 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2B:CG33900 FBgn0053900 FBtr0091904 1 1 1 60 2L 21457752 21457771 AGAAGAACATCACCAAGACC 57 21457711 21457729 ATGGCATAGCTCTCCTTCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2493 FBgn0032864 FBtr0081363 2 1 1 60 2L 20463298 20463316 TTGGGAATCCTGCTGATCG 59 20463256 20463276 CCTTGATCTCGTACTTGAACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10947 FBgn0032857 FBtr0081369 1 1 2 121 2L 20399111 20399129 ACTTGGACTCAACTGCCTC 59 20387509 20387529 TTCTGTACTAAAGCTGCTGAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CadN2 FBgn0032655 FBtr0081012,FBtr0110886 3 2 2 83 2L 17801746 17801767 CTTTACCTTTCGATTGGATCCT 58 17799661 17801702 TCATTGTCACCTCTTCGGT 58 NA Drosophila melanogaster 61 CG15253 FBgn0028948 FBtr0080782 2 1 1 62 2L 15616050 15616123 GATGAAGAACATCGTAACCAC 57 15616008 15616026 CAGGCATGAAATGGATTCG 57 NA DesignNoJunction Drosophila melanogaster 61 CG42685 FBgn0261571 FBtr0302857 1 1 1 80 2L 14728026 14728260 AAAGTATATGTCCAAGAGCCC 57 14727966 14727986 GTTAAGCTGAAGTCGTAAACG 57 NA Drosophila melanogaster 61 ppk FBgn0020258 FBtr0080638 3 1 1 84 2L 14379391 14379468 ATTCTGGATGCCCAAACCT 59 14379325 14379343 GTAGAGTTCATCCTGGGCC 59 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0100661,FBtr0080630 3 2 2 80 2L 14364280 14364380 TGACTTTAAGAAAGAGGAGTGC 58 14364419 14364439 ACAGAGCGAATATAAGTGCTC 58 NA Drosophila melanogaster 61 mTTF FBgn0028530 FBtr0080641 1 1 1 89 2L 14347714 14347732 ATCGTCTTGGTTTCAGCAC 58 14347588 14347664 CCTCTTTGATCTTGGTAACTCG 58 NA Drosophila melanogaster 61 CG16863 FBgn0028931 FBtr0110942 1 1 2 83 2L 13791157 13791228 CCGCAGATAAACCTCTTCG 58 13791275 13791293 GAATCGCAGCTTGTCATCC 59 NA Drosophila melanogaster 61 CG14921 FBgn0032345 FBtr0080227 1 1 1 105 2L 11121423 11121441 CAGGAGATCGACGAGATGG 59 11121216 11121234 GCTTCTGGAACATCTCAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG7456 FBgn0032258 FBtr0080038 1 1 1 80 2L 10486441 10486461 CATAAAGCCACGCCTTAATCC 59 10486321 10486400 TAAGCAGCAAGTTCCTCCTC 59 NA Drosophila melanogaster 61 CG5375 FBgn0032221 FBtr0113033,FBtr0080058 2 2 2 152 2L 10328727 10328811 AAGTAAAGGCAAGGAAACATGG 59 10328596 10328615 TGACCAATAGCTGGAGAGTC 58 NA Drosophila melanogaster 61 CG13138 FBgn0032211 FBtr0080066,FBtr0080067 3 2 2 60 2L 10300419 10300440 AATATCACGGGAAAGGATTTGG 58 10300380 10300400 TGGAGCTATTGACAAAGTCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4537 FBgn0032153 FBtr0113031 1 1 1 132 2L 9891061 9891138 TACCACCTTGCCGAATCTG 59 9891232 9891252 CTCTGCTTGTAGTTCTTGGTG 59 NA Drosophila melanogaster 61 CG12439 FBgn0032094 FBtr0079767 3 1 1 60 2L 9077466 9077487 CTTCTTCACCGAAATAATCCTG 57 9077508 9077526 TCGATAGGTCATCCTCTCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9568 FBgn0032087 FBtr0079765 1 1 1 82 2L 9010893 9010911 ATAGTAATGTGCCCACCGT 58 9010957 9011046 GTGAGTGTAGTTTGCTGCA 58 NA Drosophila melanogaster 61 ppk7 FBgn0031802 FBtr0079281 3 1 1 84 2L 6353089 6353164 TTCCACCGGGTCAATATCG 59 6352962 6352981 TTGTGGGAGTAGATGAGCAG 59 NA Drosophila melanogaster 61 ppk7 FBgn0031802 FBtr0079281 2 1 1 82 2L 6353089 6353164 TTCCACCGGGTCAATATCG 59 6352964 6352982 GTGGGAGTAGATGAGCAGG 59 NA Drosophila melanogaster 61 CG3355 FBgn0031619 FBtr0077376,FBtr0100560 1 2 2 80 2L 4651675 4651769 CAAGCAGAACTGCTTCTGC 59 4651812 4651831 CAAGGATACTTGTTGGAGCG 59 NA Drosophila melanogaster 61 l(2)k05819 FBgn0022153 FBtr0077433,FBtr0077432 3 2 2 81 2L 4399593 4399671 GAGAACAAGGTTAACGCGC 59 4399714 4399734 CTTAGAAGGGCGAATTCATGC 59 NA Drosophila melanogaster 61 CG15414 FBgn0031542 FBtr0077568 2 1 1 99 2L 3481905 3490839 AAGTGAAGATGCCTTACCAC 57 3481825 3481843 GTTGGTCTGCTGTAATGGT 57 NA InUTR Drosophila melanogaster 61 CG18641 FBgn0031426 FBtr0301712 1 1 1 80 2L 2411098 2411118 ATCTAATTGGTTGGTGTGAGC 58 2410976 2411056 AATTCCCTCGAGCTTTGTG 58 NA Drosophila melanogaster 61 Clp FBgn0015621 FBtr0078011 3 1 1 68 2L 820399 820417 CCACAACAAAGAGTGTCCC 58 820449 820467 TTGTACCACGGACAATCCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Clp FBgn0015621 FBtr0078011 1 1 1 60 2L 820301 820319 AGAGGACTGTGCAAGAAGG 59 820342 820361 TCTTGGTCATGTCGTACTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Hsp60B FBgn0011244 FBtr0078000 1 1 1 60 2L 729212 729232 CGCCCTTGTAATGATATCCCT 60 729249 729272 CAGACCTTTAACTATTTGCGAGAG 60 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG2807 FBgn0031266 FBtr0078068 1 1 1 120 2L 568425 568610 CACATGAAGATATCGAGGCAC 59 568692 568710 TCGCTGTCGAAGAATCCTC 59 NA Drosophila melanogaster 61 CG4297 FBgn0031258 FBtr0078085,FBtr0078086 3 2 2 60 2L 461408 461426 GTTTCGTCAAGTAGCAGCA 58 461366 461385 CTTCTCCAGCCAAAGAACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ex FBgn0004583 FBtr0078059 3 1 1 80 2L 446520 446538 CCGTATGTAAACAGACGGC 58 446579 446658 AATTGGCTTAGAGGGTATTGGA 59 NA Drosophila melanogaster 61 CG11592 FBgn0025686 FBtr0078134 2 1 1 60 2L 287486 287504 GGAGACTGGTGATCTGGAC 59 287444 287464 ATTGATTTCCGTAAGCTCCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3709 FBgn0031227 FBtr0078147 1 1 1 86 2L 155138 155162 CGGAGTATAGAAACATCAATGAGAC 59 155008 155028 CGGATATAACAAGCTCTTCGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300690 2 1 2 60 2L 8571 8668 ACAGGATGATAAATCGACGG 57 8688 8709 GTCTTCGGTAGTTATGTGTAGG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 2 6 6 80 2L 14976 14996 ATTATGTGCCTTATGGACCTG 57 14858 14937 CAATTACATCGTTGGATCTTCG 58 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 3 3 3 81 2L 738261 738333 CGTTAACTATCAGGACATGCC 59 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 1 4 4 80 2L 872013 872035 CAATCGCCTCAAGATAAACTCAG 59 872075 872220 AGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 PNUTS FBgn0053526 FBtr0091486,FBtr0091489,FBtr0091487,FBtr0091488 2 4 4 80 2L 872014 872035 AATCGCCTCAAGATAAACTCAG 58 872075 872221 TAGAATGCGTACACCTTCGT 59 NA Drosophila melanogaster 61 Eno FBgn0000579 FBtr0077907,FBtr0077908,FBtr0077906,FBtr0077909,FBtr0077905 1 5 6 195 2L 1726645 1727653 AGTACTTGTGACAGCAACG 58 1726468 1726486 CATGGTAGTTGGCCTTGTC 58 NA Drosophila melanogaster 61 CG15386 FBgn0040715 FBtr0077842 3 1 1 196 2L 2217013 2217031 CGCATGAACACGAATCGAG 59 2216782 2216806 GGACTTAAAGTAGGGATTACTAAGC 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 3 3 3 109 2L 2866729 2866819 TCTGGAAGACCAAGGTTCC 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 lilli FBgn0041111 FBtr0290041,FBtr0077634,FBtr0290039,FBtr0077632,FBtr0290040,FBtr0077633,FBtr0290038 2 7 7 82 2L 2951483 2951501 AAGTTTCGTCCCTACCAGC 59 2951547 2951648 CAGCGCAAACTGAGAATGG 59 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 3 7 7 80 2L 2963120 2963232 GCAATCTGTTAAGGTGATTCG 57 2963273 2963292 TCTTCGTAATTCGTCATGGT 57 NA Drosophila melanogaster 61 CG17224 FBgn0031489 FBtr0077672,FBtr0077671,FBtr0300815 3 3 3 92 2L 3017842 3017863 TCGGATTATTTATACCACCTGG 57 3017717 3017789 GCAGATGACCCTAACATCG 58 NA Drosophila melanogaster 61 toc FBgn0015600 FBtr0112883,FBtr0110903,FBtr0077665,FBtr0077663,FBtr0077662,FBtr0077664 1 6 6 90 2L 3070720 3070830 AAGGAGAAGGAAATCCAGCA 59 3070649 3070667 CTTTGTCATACGTCAGCCG 59 NA Drosophila melanogaster 61 for FBgn0000721 FBtr0089311,FBtr0089307,FBtr0089309,FBtr0301399,FBtr0089308 2 5 11 179 2L 3626211 3626349 GAAGCAGAGAAGGATGGAC 57 3626050 3626068 GATGGTCTGAAAGCACTGG 58 NA Drosophila melanogaster 61 Cep97 FBgn0031575 FBtr0077504,FBtr0301082,FBtr0290255 1 3 3 80 2L 3870539 3870628 CACAGGAGTATATCGAACAACTC 58 3870668 3870686 GCTGCTGAATCTTTCGCTC 59 NA Drosophila melanogaster 61 capu FBgn0000256 FBtr0290078,FBtr0077513,FBtr0290077,FBtr0290081 2 4 9 80 2L 3884509 3886993 AATGAATCAGGAGTCACAGG 57 3884448 3884466 AACAGTTGATTGCGTTTCC 57 NA Drosophila melanogaster 61 CG33003 FBgn0053003 FBtr0077434 1 1 2 83 2L 4401681 4401871 ATTTACCCGCAAGGAATCG 58 4401917 4401936 GTGATCATGATTGTGTCCCT 57 NA Drosophila melanogaster 61 CG15628 FBgn0031632 FBtr0077384 2 1 1 72 2L 4826526 4826547 AACCGATAATTCTCCATTTCCC 58 4826641 4826659 AATATGCCTAGCGTTTGGT 57 NA DesignNoJunction Drosophila melanogaster 61 hoe1 FBgn0041150 FBtr0077397 3 1 6 82 2L 4912768 4915057 TACGAGGATGACGAAGTAACAG 59 4912707 4912725 GCTAGACTGGGATCCTGAC 59 NA Drosophila melanogaster 61 qtc FBgn0028572 FBtr0100263,FBtr0100259 1 2 8 92 2L 5068387 5070108 ACATACGCACCATTTATCGC 59 5070163 5070181 TAGCGCTCTTGAGGAACTG 59 NA Drosophila melanogaster 61 Bsg25D FBgn0000228 FBtr0302568,FBtr0079084 2 2 5 99 2L 5277169 5277941 TTTCATTGAGCGTTCACTGG 59 5277089 5277107 GAGTTTGGGTGAAACCTCG 58 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0079168,FBtr0300696,FBtr0300695,FBtr0079169 2 4 4 98 2L 5719427 5719525 AATGGTGGTATCACGTTGG 57 5719347 5719365 TTTCGCACATACCGAATGG 58 NA Drosophila melanogaster 61 ade2 FBgn0000052 FBtr0079220,FBtr0079221,FBtr0079219 2 3 3 116 2L 6044340 6044436 ACATTCCAGGTTACAAACAGC 59 6044244 6044262 TATTTCCGTAGTCGGAGGC 59 NA Drosophila melanogaster 61 CG9175 FBgn0031779 FBtr0079212,FBtr0079211 1 2 2 86 2L 6097244 6097319 CCCAAAGACGTACAATCCC 58 6097176 6097194 CAATGTAGGAGCACAGCAC 58 NA Drosophila melanogaster 61 CG9526 FBgn0031815 FBtr0079258,FBtr0079259 1 2 2 80 2L 6457042 6457060 ATGTGGAATTGCAGAGCCT 59 6457101 6457346 AATAGGGACCTGTAAGAACTCC 59 NA Drosophila melanogaster 61 eya FBgn0000320 FBtr0079335,FBtr0079334 2 2 2 249 2L 6528791 6528810 TTCAACGAGATCGAGGAGTG 59 6528499 6528579 GAAGGGTGCCAACATTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG11050 FBgn0031836 FBtr0079292,FBtr0079293,FBtr0079291 2 3 3 102 2L 6616059 6616077 CAAAGACGATAAGCGAGCC 59 6616141 6616222 CTCGTATTCCTCAAACAGCTC 58 NA Drosophila melanogaster 61 CG17377 FBgn0031859 FBtr0079376 3 1 3 83 2L 6801841 6802253 TGCTGTAATGAGCTTTATGCC 59 6801778 6801797 GATCCTACCTCTACGCTCAC 59 NA Drosophila melanogaster 61 Ndae1 FBgn0259111 FBtr0299539 2 1 3 82 2L 7227157 7227176 GATCCTGGACGACATAATGC 58 7225847 7227112 GATGATTGTCCTCAGCGTC 58 NA Drosophila melanogaster 61 CG5973 FBgn0031914 FBtr0301152,FBtr0079446,FBtr0079448,FBtr0079447 3 4 4 80 2L 7444384 7444469 TTATCGATATGGAAGGGCTG 57 7444510 7444530 GAATGTAATCCAGCAACATGG 57 NA Drosophila melanogaster 61 Gr28b FBgn0045495 FBtr0079460 2 1 5 139 2L 7455749 7458040 GTCAATAAGGTGTTGAAGAACC 57 7455631 7455649 ATAATCTCCGCAGGATCCT 57 NA Drosophila melanogaster 61 Myo28B1 FBgn0040299 FBtr0079474,FBtr0079476,FBtr0079475,FBtr0079473 2 4 5 81 2L 7681986 7682004 AGCTTTGAACAACTGTGCA 58 7682044 7682122 CCTGTTCCATCTTGAAGATATGTC 59 NA Drosophila melanogaster 61 TepII FBgn0041182 FBtr0079513 1 1 5 105 2L 7698542 7698736 CTTACAACACTGAATTTCCCGA 59 7698458 7698478 GGGAAATTAGCTATAGCAGGC 58 NA Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 Su(var)205 FBgn0003607 FBtr0079635,FBtr0079636 1 2 2 104 2L 8210627 8210645 AAGGGCTATCCCGAAACTG 59 8210465 8210560 TGACTTCTCCTCATCCTTGC 59 NA Drosophila melanogaster 61 Pvr FBgn0032006 FBtr0301339,FBtr0301338 2 2 9 101 2L 8223337 8223835 GAACTGCACCGAAATTCGG 59 8223254 8223272 GGTATCCATCTGACGGTCG 59 NA Drosophila melanogaster 61 mus201 FBgn0002887 FBtr0005674,FBtr0005673,FBtr0100473 3 3 3 80 2L 8440866 8440884 AGTAAGGCCTCGAAGTCTC 58 8440925 8441038 ATCTTTGATAATCTCCTCCGGA 58 NA Nonspecific Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930 2 1 3 92 2L 8664753 8666331 CTGCGTGATTGAGACACAG 59 8666387 8666405 GATTGCGGTTGAACTGGTG 59 NA Drosophila melanogaster 61 Glt FBgn0001114 FBtr0079727,FBtr0079726,FBtr0079725 1 3 3 117 2L 8674262 8674280 CTCTAGGCTTCCTACCCAG 58 8674361 8674772 TCATAGATTCGCGACACGA 59 NA Drosophila melanogaster 61 CG34398 FBgn0085427 FBtr0112648,FBtr0112649,FBtr0300288 1 3 3 80 2L 8928731 8928996 CTAAAGCGAGCAGATCTTCC 58 8929038 8929057 AGTTGCCTTAGGTTTCTCGA 59 NA Drosophila melanogaster 61 numb FBgn0002973 FBtr0079821,FBtr0079822 2 2 2 100 2L 9460741 9460943 CAAGGTCTTGAGGCAATCC 58 9461007 9461025 CTATCAGGCCCTTGGTCTC 59 NA Drosophila melanogaster 61 CG33298 FBgn0032120 FBtr0301064,FBtr0301065,FBtr0089854 2 3 4 84 2L 9519415 9519433 CATTTCGTTGTGTCCCGAC 59 9519477 9519739 TAGACCCATAATCGGTGATTCTC 59 NA Drosophila melanogaster 61 CG4389 FBgn0028479 FBtr0079859,FBtr0079857,FBtr0079858 2 3 3 80 2L 9575427 9575512 GTAAACTTCGCGTAAATCGC 58 9575366 9575384 TCTTCACAAAGTCGGTGTC 57 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 2 7 7 83 2L 10259082 10259102 TGTTGATATGTGGCTCAAGGA 59 10258906 10259037 ATCATGGTACCGGTTCTGC 59 NA Drosophila melanogaster 61 CG18619 FBgn0032202 FBtr0089735,FBtr0089736 1 2 4 88 2L 10264810 10264828 GCGGTATCAGTACCTGGAG 59 10264880 10264955 TTGAATTAACGACGCGCTC 59 NA Drosophila melanogaster 61 Utx FBgn0260749 FBtr0080077,FBtr0080075,FBtr0080076 3 3 3 80 2L 10275742 10275761 TTCCTAGCATATCGCAACTC 57 10275614 10275699 TTGCTGATATAAGACGCCG 57 NA Drosophila melanogaster 61 CYLD FBgn0032210 FBtr0080068,FBtr0080071,FBtr0080072,FBtr0080070,FBtr0080069 3 5 5 81 2L 10296850 10296948 CGTTTCTAAAGCTAAGCTCGG 59 10296789 10296812 CTCGGTAATGTTAACTTCTCATCC 59 NA Drosophila melanogaster 61 Klp31E FBgn0032243 FBtr0302039,FBtr0302038,FBtr0302040,FBtr0080018 2 4 4 80 2L 10414647 10414788 GTTGCTGTCAGAATCCGAC 58 10414832 10414850 CTCTCCAAGAGTGACGGTC 59 NA Drosophila melanogaster 61 CG17127 FBgn0032299 FBtr0080136,FBtr0290229 1 2 2 61 2L 10771182 10771200 CAACCAGCGCATCAATCTC 59 10771225 10771243 TGTTTATCACCTCGGAGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17140 FBgn0260453 FBtr0100838,FBtr0100837 3 2 2 116 2L 10843819 10843840 GTTCACCAACAATGATCTTCTC 57 10843656 10843743 GTTTGAAAGCTCACTTCGTC 57 NA Nonspecific Drosophila melanogaster 61 l(2)06225 FBgn0010612 FBtr0110872,FBtr0110873,FBtr0080167 1 3 3 167 2L 10976154 10976261 ACTTGTGAACAGGCTCCTC 59 10976005 10976023 ACCGTGAGGTTCTTGTAGG 59 NA Drosophila melanogaster 61 Gyc32E FBgn0010197 FBtr0080223 1 1 4 139 2L 11142950 11142969 GGGTGAACATTATGGAACGT 58 11142232 11142785 TATGGGAACCCGAATATGGG 59 NA Drosophila melanogaster 61 ab FBgn0259750 FBtr0300473,FBtr0080204,FBtr0080203 1 3 4 137 2L 11237095 11237113 CAGCATCCACTCACAAGGA 59 11237213 11237367 CAGTTCGTGTTTCGGATTGG 59 NA Drosophila melanogaster 61 salr FBgn0000287 FBtr0080235,FBtr0080236 1 2 2 93 2L 11369001 11369736 ATTTATGGGTCTGCATCCG 57 11369793 11369811 TTCGCTCTGCAAATGACTC 58 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0299658 3 1 8 84 2L 12477157 12516493 TTATCAGCAGTGCATCTGGA 59 12458201 12458219 ATGAGATGCGACTTGACCA 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090017,FBtr0090026 2 2 17 136 2L 12726994 12727012 AAGCTTTCCAAATCGGCTC 58 12727111 12728591 ATACCCTGTAACAACTTGGC 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090023,FBtr0090026,FBtr0090022,FBtr0090029,FBtr0090025,FBtr0090014,FBtr0090024 3 8 17 93 2L 12724261 12724279 GTGACAAGGAGATTGCGAC 58 12724334 12724775 ACTAATGAAACCAGGAACGGT 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090021,FBtr0090013,FBtr0090027 1 3 17 87 2L 12731059 12737971 TCTTTATGGTTCTGGCTACCA 58 12738020 12738038 TAGTACAGGAAGGCGATGG 58 NA Drosophila melanogaster 61 CG9934 FBgn0032467 FBtr0301247,FBtr0080428 2 2 2 94 2L 13014015 13014034 ATCGAGGATAAAGCGACTGG 59 13013875 13013963 GGTTGGTAACATAGATTTCGTGAG 59 NA Drosophila melanogaster 61 CG31728 FBgn0051728 FBtr0290061 2 1 1 69 2L 13257092 13257110 GATGATTTGCGCTGGTCAG 59 13257200 13257218 ATTGATGACCATGGGTCCG 59 NA DesignNoJunction Drosophila melanogaster 61 nAcRalpha-34E FBgn0028875 FBtr0301836,FBtr0080594,FBtr0300594 2 3 3 80 2L 14062614 14068878 TGCTAAAGTTTGCCTAGCAG 58 14068917 14068939 GGACGTTCTAGTGTATTATAGGG 57 NA Drosophila melanogaster 61 spel1 FBgn0015546 FBtr0080630 1 1 2 80 2L 14364541 14364562 ACAACATCATCAAGGGTTTGAG 59 14364603 14364697 ATTTGTCAGTGGCAGTCCT 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0100611,FBtr0080709,FBtr0300934 2 3 9 111 2L 15261795 15261814 AATCTACGACGAATCCTCGA 58 15258924 15261724 GGAAAGTTGTCCGTTAATTTCC 58 NA Drosophila melanogaster 61 Cul-3 FBgn0261268 FBtr0302159 3 1 4 166 2L 15269193 15269381 CATTCAATGCCTCCATGGAC 59 15269046 15269067 GTAATACAGTCTATTGCCGTGC 59 NA Drosophila melanogaster 61 CG18063 FBgn0028856 FBtr0300614,FBtr0300065,FBtr0300064 2 3 3 83 2L 15958577 15958710 GACTCGAGCATATGTCTGGA 59 15958755 15958774 TTTGTAGCAAGCATTAGCGT 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0080906 2 1 16 88 2L 16777367 16777385 GTGTGCTTGAAGGTATCCG 58 16777437 16777646 AGCCAGAATCATGTAACGC 58 NA Drosophila melanogaster 61 Mhc FBgn0086783 FBtr0301828,FBtr0301827,FBtr0080898,FBtr0080895,FBtr0080903,FBtr0080902,FBtr0080901,FBtr0080896,FBtr0080904,FBtr0080897,FBtr0301829,FBtr0080899,FBtr0080907,FBtr0080900 2 14 16 82 2L 16774784 16774802 AGACTCTGGATACCCAGCA 59 16774846 16776271 ACCGTTGTACTCGAAGATCTC 59 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969,FBtr0080968 1 2 2 80 2L 17383513 17383531 CAAGCTGAAGGACTTTCCC 58 17374730 17383472 AATCTATTCCGGGAAAGATCTG 57 NA Drosophila melanogaster 61 CG6860 FBgn0032633 FBtr0080969 2 1 2 81 2L 17370886 17370906 GCACGATTCCCATACATTGAC 59 17368371 17370845 AGCGCAGCAAATTAGATTCAG 59 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0080976,FBtr0290261,FBtr0301440,FBtr0080975,FBtr0301441,FBtr0290265,FBtr0080977 3 7 10 80 2L 17408761 17408780 TTCTGAGCCTAAAGGCTCAG 59 17408822 17408908 TTTCGATGTCCAGTGACTCC 59 NA Drosophila melanogaster 61 qua FBgn0003187 FBtr0080997 3 1 2 82 2L 17489892 17491809 AAGAAACGGAGATCCGTCC 59 17489828 17489847 GGTAATCGCATGTTTAGCCA 58 NA Drosophila melanogaster 61 CG10283 FBgn0032681 FBtr0081085,FBtr0081086 1 2 4 173 2L 18475267 18475342 AGATGAGGTACCATTGCTGG 59 18474542 18474560 AGACGAGCTTTCTCCTTGG 59 NA Drosophila melanogaster 61 CG10600 FBgn0032717 FBtr0081120 1 1 2 127 2L 18838787 18838892 GAGAAGACAGAAGAGCGCA 59 18838678 18838696 TTGTCCCGATCCCTATCCT 59 NA Drosophila melanogaster 61 CG10602 FBgn0032721 FBtr0089317 1 1 4 99 2L 18857393 18858960 ACCCAATGATCTCTACTCGC 59 18857313 18857331 GGATCCACGACTCCTAAGC 59 NA Drosophila melanogaster 61 CG10623 FBgn0032727 FBtr0081190 2 1 1 90 2L 18956474 18956494 AGTCACCGAATTAGTACTGGA 58 18956298 18956316 TTCTCCACTAGCCATGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 3 3 3 87 2L 19067507 19067579 AAGGACAAGTACGTCATGG 57 19067438 19067458 GTGATCCGGAAATAACATAGC 57 NA Drosophila melanogaster 61 lectin-37Da FBgn0053532 FBtr0091498,FBtr0302361 2 2 2 61 2L 19418373 19418391 TCGGCTACGACAAGTACAC 59 19418477 19418496 GTCAACGGTCAAGTTGTACG 59 NA DesignNoJunction Drosophila melanogaster 61 barr FBgn0014127 FBtr0081349,FBtr0081348 2 2 2 120 2L 20060344 20060421 CAACTTCAAGATGGCTGGT 58 20060242 20060260 CGTAAGAGTTCGTGCACTC 58 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081328 1 1 3 116 2L 20062056 20062161 TTCTGTTGATCTCAACAACGAC 59 20062237 20062256 AAATGCACTTTGGAAATGCG 58 NA Drosophila melanogaster 61 CG8671 FBgn0032938 FBtr0114602 1 1 3 146 2L 21278292 21278310 GTCCTTTATGTCGCGTACC 58 21278419 21281140 CTGGGATTCCTCATTAGCTC 57 NA Drosophila melanogaster 61 CG31619 FBgn0051619 FBtr0301000 1 1 4 150 2L 21720473 21725097 AATCTCCAGCGCTTTAAAGAC 59 21725208 21725227 GCGAATGCAATACTTCTGGG 59 NA Drosophila melanogaster 61 Spf45 FBgn0086683 FBtr0111239,FBtr0111241,FBtr0111240 2 3 3 95 2L 22959942 22959962 AATCATTCACGAATCGTTCGG 59 22959806 22959888 TCCACTACAGCTTTAATTGCAC 59 NA Drosophila melanogaster 61 bft FBgn0041606 FBtr0080320 2 1 2 109 2L 11960347 11960408 GAGTGTGATTACGCCTCCA 59 11960256 11960274 TATCTTCGACTTCTGGCCG 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 1 3 5 94 2R 614722 614741 TTCAACGTACCAAACGAACC 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 1 6 6 80 2R 644084 644172 GTTCTATTGGTCGATCAAAGGAG 59 644212 644230 CTGACAGCACTTCACTCGA 59 NA Drosophila melanogaster 61 gus FBgn0026238 FBtr0089756,FBtr0089754,FBtr0089755,FBtr0089752,FBtr0089757,FBtr0089753 2 6 6 108 2R 1008349 1008367 ATTGCGTTTAGAGGACTGC 58 1005299 1008277 AGGGTTCGGGATCTAATCC 58 NA Drosophila melanogaster 61 Atf6 FBgn0033010 FBtr0086081,FBtr0086080,FBtr0086079 1 3 3 153 2R 1036542 1036563 CAACGTATGATTAAGAACCGAG 57 1040308 1040327 GCAGAAATATCTGATCCCGT 57 NA DesignNoJunction Drosophila melanogaster 61 CG10417 FBgn0033021 FBtr0086092,FBtr0086091 2 2 2 92 2R 1249044 1249113 TGACGAAGATGGTAATGAGGA 58 1248972 1248993 GGTTCCTCAATCATATTTGCAC 58 NA Drosophila melanogaster 61 CG30438 FBgn0050438 FBtr0086068,FBtr0086067,FBtr0086069,FBtr0086070 1 4 4 80 2R 1435421 1435505 ATGCACATGTATGTTATGCGTC 59 1435546 1435564 CATTTCGTAAGGATGCGGG 59 NA Drosophila melanogaster 61 ap FBgn0000099 FBtr0300504,FBtr0086059,FBtr0086058,FBtr0300505 1 4 4 88 2R 1595871 1596125 GCTAACATAGATCTCAACACTGAG 59 1595806 1595824 GAGGTTCGCATTCGTTTGG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086008,FBtr0086010,FBtr0086009 2 3 6 103 2R 2039492 2039583 GACTTGATGTTACCGAGGAC 58 2039408 2039426 GTAGCTGTGATTCTGCGAG 58 NA Drosophila melanogaster 61 CG15234 FBgn0040673 FBtr0089698 3 1 1 143 2R 2495735 2495753 CATTGGACGTCCTTAGTGC 58 2495551 2495571 ACTTCAAGTTTCTGCAACGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG33558 FBgn0053558 FBtr0302578,FBtr0302034,FBtr0302579 2 3 6 86 2R 2814318 2814906 CACATCATCCAAACTATGCCA 58 2814252 2814270 GATTCTCGAGGAATTCGGC 58 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 3 3 3 99 2R 2890649 2890730 CATGTCCATGACGTACTCG 58 2890792 2890811 GATCTCCAGGTACTTGTCCT 58 NA Drosophila melanogaster 61 Tsp42Ea FBgn0029508 FBtr0086172,FBtr0086171,FBtr0086173 2 3 3 99 2R 2884361 2884442 ATGTCCATGACGTACTCGA 58 2884504 2884523 TGATCTCCAGGTACTTGTCC 58 NA Drosophila melanogaster 61 Tsp42Ec FBgn0033124 FBtr0086179 1 1 1 141 2R 2895354 2895372 CTCATCTTCGTGGTGTCCT 59 2895540 2895558 CAGATCGGTTCACGAACAC 59 NA DesignNoJunction Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111068 3 1 59 93 2R 3244970 3244988 TGAGATTAACTACGCCCGG 59 3236471 3244913 CTTGTACCATCGGAAGGCA 59 NA Drosophila melanogaster 61 sPLA2 FBgn0033170 FBtr0088972,FBtr0100138 2 2 3 195 2R 3330872 3330957 GTTTCCCATCCTCAAGTGC 58 3331116 3331134 CACCTGGTAGCGGATACAG 59 NA Drosophila melanogaster 61 wech FBgn0259745 FBtr0300084,FBtr0300081,FBtr0300083,FBtr0300080,FBtr0300082 1 5 5 80 2R 3371064 3371167 GGACTTTATGTGGGATATCGAG 58 3371005 3371023 CAAGTGCGATCTTTCTCGT 58 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089743 2 1 3 175 2R 3390369 3390387 AATCGTGACACAGTCTCCA 58 3390526 3390687 TCATTCCCTTGCTGTTTGC 59 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 1 1 1 93 2R 3399777 3399796 ACACTTTGCTCCTTTAACCA 57 3399637 3399657 GCATGTCTGCTGCTTATACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 1 3 3 116 2R 3690701 3691032 GATATTTCCGAGACTTCATCGC 59 3690606 3690624 CATCACATTGTCCAGCACG 59 NA Drosophila melanogaster 61 rnh1 FBgn0023171 FBtr0088884 1 1 2 87 2R 3819568 3819591 CAGTATCGAAGTGAATAAGAACCC 59 3819343 3819523 AATGTCTGGCAGATCATCCT 58 NA Drosophila melanogaster 61 CG8726 FBgn0033244 FBtr0088874 3 1 3 82 2R 3859024 3859149 GACATACGGAGTACCTGCT 58 3858960 3858978 GAAGTCATTATAGCGGCGC 59 NA Drosophila melanogaster 61 CG11198 FBgn0033246 FBtr0113054,FBtr0088871 3 2 4 168 2R 3873242 3873264 GTTGATCACGATATTAGGCACTC 59 3872946 3873114 GCTGGAGTTGTGATTGGTG 59 NA Drosophila melanogaster 61 LvpH FBgn0002570 FBtr0088759 2 1 1 61 2R 4337511 4337532 ACGATGTGATCATCTATTCACG 58 4337409 4337433 GTTGAGAACGATTACATAGAGATCG 59 NA DesignNoJunction Drosophila melanogaster 61 mtt FBgn0050361 FBtr0273325,FBtr0273327 1 2 4 111 2R 4376853 4380733 TATCAAAGGGTCCATCAGCA 58 4376761 4376779 TATGGATGTGACCGAGGAG 58 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088570,FBtr0088571,FBtr0088572,FBtr0302507 3 4 12 80 2R 5003947 5004693 CAAGTACAAGGAATGTGAGCA 58 5004733 5004753 GAGATGTTCAGAAACGACAGG 59 NA Drosophila melanogaster 61 Su(var)2-10 FBgn0003612 FBtr0088572,FBtr0088573,FBtr0088578 1 3 12 156 2R 5006405 5006424 GTTGACCTAACGTTAAGCGA 58 5006543 5007266 CATTACCACCGGATTGCTG 59 NA Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 3 3 10 83 2R 5155478 5171348 GGATTCGTATTATCAGGGCG 58 5155414 5155433 GGCAGATTCTCTGTGAAACC 59 NA Drosophila melanogaster 61 Updo FBgn0033428 FBtr0114567,FBtr0088524 1 2 2 130 2R 5473113 5473131 GAAGAGAATACGCGACGAG 58 5473284 5473302 CAATAACGTCGTAGCCCAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG12744 FBgn0033459 FBtr0088377,FBtr0088378 3 2 2 86 2R 5763387 5763408 AAACGATTATAAGCTGGATCCC 58 5763452 5763529 CAGAGATTCGGATTGAAGAAGG 59 NA Drosophila melanogaster 61 CAP FBgn0033504 FBtr0299825,FBtr0088342,FBtr0088343 2 3 17 104 2R 6180370 6180857 GATCAGAACATTCGAACGCT 58 6180924 6180942 ACTTCATTGGGCCTGTAGG 59 NA Drosophila melanogaster 61 G-oalpha47A FBgn0001122 FBtr0088271,FBtr0088266,FBtr0088267,FBtr0088269,FBtr0088272,FBtr0088264,FBtr0088268,FBtr0088270,FBtr0088265 2 9 9 82 2R 6348880 6348900 ACAAGAAGGATTTGTTCGAGG 58 6348944 6349031 GTACTCCTGTCCACCTGTG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0089346 2 1 26 80 2R 6389913 6389932 ATTCGAGTCCGTAATTGGCT 59 6389724 6389873 AATATGTAAGACTGAGGGCTCG 59 NA Drosophila melanogaster 61 psq FBgn0004399 FBtr0088276 1 1 12 132 2R 6500313 6500332 CCGCACTATACGAATTTGGA 58 6500426 6500499 TTAATGCATCTTTCTCGCCA 58 NA Drosophila melanogaster 61 nompA FBgn0016047 FBtr0089382,FBtr0089381,FBtr0089379,FBtr0089380 3 4 5 80 2R 7199277 7199300 CAGCCATTATCCTGTTAATGATCC 59 7199168 7199239 TGGATTTCCAGTAGCGTCTG 59 NA Drosophila melanogaster 61 CG8850 FBgn0033708 FBtr0087973,FBtr0087972 1 2 2 80 2R 8186569 8186651 TTTGGCAGTAAATTCGGACTG 59 8186509 8186529 TATGTAGGCCTCGAACTTCTG 59 NA Drosophila melanogaster 61 Dyb FBgn0033739 FBtr0113074 1 1 6 121 2R 8337709 8337727 CCATTTCGCACATGGTCAG 59 8338095 8338432 GATGTGTCGGAATTCCAGTG 59 NA Drosophila melanogaster 61 achi FBgn0033749 FBtr0087943 2 1 2 83 2R 8400280 8400874 TCATCTACAGGTCCGAAGG 58 8400215 8400233 TCTCGAAGCGTACTTCCTC 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 nemy FBgn0033765 FBtr0111018 1 1 8 126 2R 8560835 8561719 GATAATCAGCCATCGCGAG 58 8560727 8560745 AATTCCGGTGGTCTTTAGC 57 NA Drosophila melanogaster 61 Nmda1 FBgn0013305 FBtr0089874,FBtr0089877,FBtr0089873,FBtr0089878,FBtr0089875,FBtr0089876 3 6 6 80 2R 8765629 8765648 TCTTGGGTCTGTTTACAGCA 59 8765510 8765587 CCATGAGAACCTCTTTCGGA 59 NA Drosophila melanogaster 61 NAT1 FBgn0010488 FBtr0087787 3 1 3 96 2R 8805401 8805512 GTCACAATTGATTCCCTAAACG 58 8805569 8805587 GAAGTAACAAGTCCTGCGT 57 NA InUTR Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 2 3 3 90 2R 9056874 9056894 AGGCCATTGTCTATTCCTACG 59 9056944 9057020 GCCTCATCCACAAAGATAAGG 58 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 2 4 6 141 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151378 9151396 TTCTCAATGGTGTTCGTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33156 FBgn0053156 FBtr0113450,FBtr0087682,FBtr0087684,FBtr0087681,FBtr0087683 1 5 5 81 2R 9436513 9436531 TATGGTGACTCCCATCTGC 58 9436391 9436472 TACTGATATCTTCAGCTCCACTC 59 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0087620,FBtr0087621,FBtr0301593,FBtr0301964 2 4 15 84 2R 9795141 9795159 TCGGAGTTGGAGTATCGTC 58 9792988 9795096 CCACAACAATATCGGAGATCTC 58 NA Drosophila melanogaster 61 shot FBgn0013733 FBtr0273222,FBtr0087617,FBtr0087620,FBtr0087621,FBtr0273225,FBtr0087618,FBtr0273224,FBtr0087619,FBtr0087616,FBtr0301964 2 10 15 150 2R 9752989 9753575 AACCAATTAGGCGAAACATCAG 59 9752860 9752878 TATAGCCGGAATGGCTCAC 59 NA Drosophila melanogaster 61 CG33155 FBgn0053155 FBtr0100451,FBtr0100452,FBtr0100453 2 3 3 235 2R 9842538 9842726 ATTCAGCGCAAGAACAAGC 59 9842925 9842943 TTCCTTTGTGCTTCCTCAC 58 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Cp1 FBgn0013770 FBtr0087592,FBtr0087591,FBtr0087593 2 3 3 138 2R 9849831 9854267 ATACGTTCAAGCTGGAGCA 59 9854369 9854387 AGTTTGAAGCTCACCTTGC 58 NA Drosophila melanogaster 61 O-fut1 FBgn0033901 FBtr0087520 2 1 1 63 2R 10049061 10049079 TACCTCACCTACTGTCCGT 59 10049161 10049179 ATGATCCCAGGAAGTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG8331 FBgn0033906 FBtr0302451,FBtr0087525,FBtr0302452,FBtr0302453 3 4 4 98 2R 10059939 10059957 TCTACTGGGTCACGTTTGG 59 10060019 10060098 GGAAAGCACACTTCAGCAG 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 1 3 8 80 2R 10064187 10065378 GACAAGAACTGTGACATACTTCC 59 10065418 10065436 CGAGTCCTCGTTATCCTCC 59 NA Drosophila melanogaster 61 cg FBgn0000289 FBtr0087526,FBtr0087528,FBtr0087529 2 3 8 80 2R 10064183 10065370 CCTCGACAAGAACTGTGAC 58 10065414 10065432 TCCTCGTTATCCTCCAGTC 57 NA Drosophila melanogaster 61 aPKC FBgn0022131 FBtr0110999 1 1 6 112 2R 10836921 10837073 CTAGCCTGCCTATTTCCCA 58 10836456 10836474 TTGACGCGATACAACTTGC 59 NA Drosophila melanogaster 61 mus210 FBgn0004698 FBtr0087373,FBtr0087374,FBtr0087372 1 3 3 80 2R 11204640 11204719 AAAGTGGGATAGGCTCACG 59 11204762 11204781 TCGTATTCCTGAGTTTGCCA 59 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087345,FBtr0087348 1 3 7 91 2R 11545901 11546127 CTCACAAGCCATGTATCCG 58 11545828 11545847 GTATCAGGCCAGTACTTGTG 58 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302556 2 1 3 75 2R 11588665 11588683 CGAGCTTGCAATTAGTTGC 58 11587512 11588626 TCTTGTTACTTCGGACAGC 57 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087173,FBtr0087176 3 2 5 116 2R 12220627 12220645 ACTGGACACCTATGTGGAG 58 12214656 12220547 GGTAGTTCGGTGTTGTTGG 58 NA Drosophila melanogaster 61 CG5065 FBgn0034145 FBtr0302206,FBtr0302205,FBtr0087108 1 3 3 80 2R 12507179 12508835 TGGATTTATGGGAAAGGTACTG 57 12508870 12508894 GGTCGTATCAGTAGATAGATATTCC 58 NA Drosophila melanogaster 61 Pkc53E FBgn0003091 FBtr0112819,FBtr0087048 2 2 3 81 2R 12814241 12814260 CAAGGATCACTGCTTCATCG 59 12814302 12815639 CTGATAGCCGCAGATAAAGTC 58 NA Drosophila melanogaster 61 CG8963 FBgn0034181 FBtr0087016,FBtr0300573,FBtr0087017 3 3 3 94 2R 12905298 12905579 TGCCTTAACCAGAATCCGG 59 12905222 12905240 ATGGAGAGCACGAATTGGT 59 NA Drosophila melanogaster 61 CG30109 FBgn0050109 FBtr0086838 3 1 1 74 2R 13557812 13557830 GGTCTATCAGGAGTGCGTC 59 13557926 13557944 CAGTACTCAGATCCGACCT 57 NA DesignNoJunction Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 1 3 3 134 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592684 13593866 CTCGTTCAAATTCTGCTCGA 58 NA Drosophila melanogaster 61 CG6424 FBgn0028494 FBtr0301202,FBtr0086887,FBtr0086886 1 3 3 134 2R 13593963 13593981 AAGACTGATCCCATCGCAG 59 13592684 13593866 CTCGTTCAAATTCTGCTCGA 58 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300538,FBtr0300539,FBtr0299705,FBtr0299706 1 4 7 190 2R 13696981 13697000 ACGGATCAGAAGAGTTTGGA 58 13697153 13708516 TTGAGCTTTCCACTCTGCA 59 NA Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 1 3 7 93 2R 13714749 13714767 ATCAGAATCAGGATCGCCG 59 13714819 13714908 ATGTGAGGTCTGTAGATAGATCTG 59 NA Drosophila melanogaster 61 Dp1 FBgn0027835 FBtr0086683,FBtr0086681,FBtr0086680,FBtr0086679,FBtr0086678,FBtr0086682 2 6 6 82 2R 14304950 14304968 ATCTCCTCGATCATGGAGG 58 14305013 14305092 CGAATAGTGACCTTATCGCT 57 NA Drosophila melanogaster 61 CG5174 FBgn0034345 FBtr0086684,FBtr0086689 1 2 8 95 2R 14312453 14312471 ATTTCGTCGAAACTGTCGC 59 14312528 14313477 ACTCAACGCTTTAACGTTCTC 59 NA Drosophila melanogaster 61 abba FBgn0034412 FBtr0086572,FBtr0086573 2 2 3 197 2R 14892378 14893301 CTAGCATCAAGGTACAGCG 58 14893462 14893480 GTTCTTCAAGTACCGTGCC 58 NA Drosophila melanogaster 61 5-HT1B FBgn0004572 FBtr0300482 3 1 3 82 2R 14913435 14913455 CTACATTATTGCCAGGAAGCG 59 14911876 14913391 TGGTGCGATAGTCAGTCTC 58 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 2 4 6 91 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319672 15319690 GCTGACATGAAGTCAAGCT 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0100232,FBtr0301609 3 3 6 112 2R 15461820 15488395 ATCACAGTTGATGTCTTGCAC 59 15461728 15461748 GCATCCAGATTATCGAACTCG 59 NA Drosophila melanogaster 61 mus209 FBgn0005655 FBtr0086307,FBtr0086308 1 2 2 75 2R 16150150 16150168 AGGATCTGCTCAATGAGGC 59 16150033 16150051 ACATGGGAGTTGTCCATGG 59 NA DesignNoJunction Drosophila melanogaster 61 exu FBgn0000615 FBtr0086243,FBtr0302285,FBtr0086242,FBtr0086244 1 4 4 89 2R 16557768 16557786 GATAAAGTTGAGCTGCCGG 59 16557628 16557719 CTGGACAATCTCATCCATTAGAC 58 NA Drosophila melanogaster 61 king-tubby FBgn0015721 FBtr0089600,FBtr0089599 2 2 2 80 2R 17010150 17010168 TTCACGGTCTTTGACAACG 58 17010209 17010287 GTTGGTGTCATAAATGATGACG 58 NA Drosophila melanogaster 61 Xpd FBgn0015844 FBtr0071577,FBtr0071576,FBtr0301875 3 3 3 81 2R 17059013 17059033 CGGTAAATGTTACGGACTCAC 59 17059076 17059146 AAAGTACTGGCAAATGGGC 58 NA Drosophila melanogaster 61 dve FBgn0020307 FBtr0071775 2 1 2 119 2R 18150941 18168184 AGTGAATCCCAAATCACTTCC 58 18168265 18168283 CTGTCGGTCTCGATATTGG 57 NA Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 2 1 1 97 2R 18545711 18545729 TACTGACCACCGTGAAGTC 59 18546437 18546455 GTAAGGTAGGCATACGCAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG13510 FBgn0034758 FBtr0071862 3 1 1 98 2R 18545711 18545729 TACTGACCACCGTGAAGTC 59 18546438 18546456 AGTAAGGTAGGCATACGCA 58 NA DesignNoJunction Drosophila melanogaster 61 apt FBgn0015903 FBtr0072066 2 1 5 116 2R 19452572 19484432 CGGTCAACAAACAGTATTCG 57 19484508 19484591 GTGTCATTTCCGTCTTTATGTC 57 NA Drosophila melanogaster 61 G-salpha60A FBgn0001123 FBtr0072144,FBtr0072142 3 2 4 85 2R 19833784 19833989 AGTGACGCAATAATGGAATCC 58 19834032 19834134 GTAGATATACGCAGAAACTCGTC 59 NA Drosophila melanogaster 61 CG13567 FBgn0034963 FBtr0072190,FBtr0072189 2 2 2 88 2R 19924655 19924733 TGGTCAACCGACTAACCAC 59 19924585 19924603 GACTGTTTCGCAAGTCGAG 59 NA Drosophila melanogaster 61 CG3209 FBgn0034971 FBtr0072179 2 1 2 126 2R 19957650 19957668 GCACCAATAGGCACTACGA 59 19957758 19959524 AACCACACTACACCAACGA 59 NA Drosophila melanogaster 61 CG13585 FBgn0035020 FBtr0072303,FBtr0300488,FBtr0300489,FBtr0072304 1 4 4 90 2R 20420157 20420428 TGTTACGATGTCACCGGAC 59 20420482 20420500 TCAGGAAGATCATGGCGAC 59 NA Nonspecific Drosophila melanogaster 61 CG3683 FBgn0035046 FBtr0072325,FBtr0301036,FBtr0072326,FBtr0072324 2 4 4 81 2R 20552131 20552149 CTAAATCTATCGTCGGCGG 58 20552191 20552386 GCATAAACTCATTATTGGCCTG 58 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 3 2 3 80 2R 20766557 20766575 CATAGTGGCCCTAATAGCG 57 20766616 20766698 CGATTATGGAACCAAGTTACTC 57 NA Drosophila melanogaster 61 CG30427 FBgn0043792 FBtr0072413 3 1 6 95 2R 20821645 20821665 TACACCTACTCAAAGCGTCTG 59 20817483 20821588 AGCTGGAGTTACGATGCTG 59 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 2 7 8 118 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878690 20878708 TTCATCCTGGACCGATGAG 58 NA Drosophila melanogaster 61 zip FBgn0005634 FBtr0302572,FBtr0302573,FBtr0072398,FBtr0302574,FBtr0072399,FBtr0100467,FBtr0100466 2 7 8 118 2R 20878790 20879345 AAACGAAACTACGACGCAC 59 20878690 20878708 TTCATCCTGGACCGATGAG 58 NA Drosophila melanogaster 61 Pk61C FBgn0020386 FBtr0072467,FBtr0072464,FBtr0072465,FBtr0072468,FBtr0072466 2 5 9 119 3L 135829 135971 GTATCTGACAAACGGCCAC 58 136054 136072 TTCTGGTACTGCTGCAGAC 59 NA Drosophila melanogaster 61 E(bx) FBgn0000541 FBtr0301349,FBtr0072523,FBtr0301348,FBtr0072521,FBtr0072522 1 5 5 83 3L 241486 241572 CTGTAAGAGAAGTAACATCCATACG 59 241427 241445 TAATTTGTGGCTCGGTTGG 58 NA Drosophila melanogaster 61 miple FBgn0027111 FBtr0072505,FBtr0072504 1 2 2 82 3L 268393 268411 GGAGAAGTATGGGAGGAGG 58 268457 268578 TATCGACAAGACAGACCGT 58 NA Drosophila melanogaster 61 RhoGEF3 FBgn0259743 FBtr0299987 2 1 10 148 3L 293046 293064 CATACCACGTGGTACTTGC 58 293176 298967 TTTGGCATTTCGTCACTGG 59 NA Drosophila melanogaster 61 CkIIalpha-i3 FBgn0025676 FBtr0072604,FBtr0072603 2 2 2 80 3L 709129 709150 GTGAATTTACCGATGAAGAGGA 58 709014 709091 ATTCAACAGTCTCCTTGATCTC 58 NA Drosophila melanogaster 61 CG34057 FBgn0054057 FBtr0100835,FBtr0100834 2 2 2 73 3L 898361 898379 GTAATTCCTGGCTGGAGGG 59 898478 898496 GGATATAGCCGAAGCAGCA 59 NA DesignNoJunction Drosophila melanogaster 61 trio FBgn0024277 FBtr0072648,FBtr0072646,FBtr0072645,FBtr0072649,FBtr0072644,FBtr0072647 1 6 6 80 3L 998875 998894 CCGAATACATAGTCAGTGCC 58 998722 998833 AGTTACTCAGATCCAGACGA 57 NA Drosophila melanogaster 61 CG9205 FBgn0035181 FBtr0072621,FBtr0072622 2 2 2 81 3L 1035389 1035409 AACAGGATCATTCGTGAATCG 58 1035452 1035568 ACTGCCATCCCTTCATCAC 59 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072717,FBtr0072718 3 2 4 116 3L 1346441 1350383 CGCTTCTACAAGGAAATTTGTG 58 1346346 1346364 ATTCACATCCCGATAGCGA 58 NA Drosophila melanogaster 61 Cct1 FBgn0041342 FBtr0072741,FBtr0072739,FBtr0072738,FBtr0072740 3 4 4 112 3L 1551788 1551869 GCTATGTGGACGAGATCGT 59 1551945 1551963 GCCATCGGTTACATACGGA 59 NA Drosophila melanogaster 61 ABCB7 FBgn0035244 FBtr0072754,FBtr0072756,FBtr0072755 2 3 3 102 3L 1621164 1621183 TTGTTCAAAGGAGCTGTGGA 59 1621245 1621325 CAATGCCATATCCCAACATCAG 59 NA Drosophila melanogaster 61 CG7995 FBgn0035266 FBtr0072769,FBtr0072771,FBtr0072768,FBtr0072770,FBtr0072767 2 5 5 99 3L 1743824 1743911 CTTGACAAACGGAGCTCTC 58 1743974 1743992 CTTGAGCAGAACAGGATCC 57 NA Drosophila melanogaster 61 CG42669 FBgn0261551 FBtr0302681,FBtr0302679,FBtr0302678,FBtr0302685 3 4 12 64 3L 2461249 2461268 AACGATAGATGCGGAATTCG 58 2465128 2465147 TTCCCGTCTTAAGAATGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 RpL8 FBgn0024939 FBtr0072924,FBtr0072925 2 2 2 211 3L 2587882 2588094 GTTGTCAAGGACATCATCCA 57 2588268 2588286 CAGATGATGGTACCCTCGG 59 NA DesignRelaxed Drosophila melanogaster 61 Pxn FBgn0011828 FBtr0072954,FBtr0072953,FBtr0072952,FBtr0072951 3 4 5 163 3L 2607829 2607847 ATTGATCCGAATGTGCAGC 59 2604271 2607704 ACGTTGTTTCTGATGGTTACC 58 NA Drosophila melanogaster 61 MEP-1 FBgn0035357 FBtr0290340 3 1 7 166 3L 2631964 2631982 AACCATTGGTTAGCGTCAG 58 2632112 2633546 CGGCTAATTCTTTGGAGGC 59 NA InUTR Drosophila melanogaster 61 CG12734 FBgn0035411 FBtr0073036 2 1 2 168 3L 3183708 3183729 GAGTCGGATAATAGCAATGAGG 58 3183991 3184263 GGCGCTTCAAGAGTTTCTG 59 NA Drosophila melanogaster 61 CG17746 FBgn0035425 FBtr0073094,FBtr0073093 2 2 2 160 3L 3237659 3237754 CAAATCGTCACAGCCTTCC 59 3237517 3237535 ATCTCCTCCGGAAACATGC 59 NA Drosophila melanogaster 61 CG14968 FBgn0035431 FBtr0073087,FBtr0073090,FBtr0073089,FBtr0073088,FBtr0073086 2 5 5 66 3L 3300762 3300780 TAGTACCACCGATCTGGAC 57 3300039 3300736 GTACTTCACCTTGAACGTTATGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG11526 FBgn0035437 FBtr0073083,FBtr0073084 3 2 2 155 3L 3324627 3324708 GAACTTCAAACGCTCCCTG 59 3324490 3324510 TAGGGTCGGTAGTACTGAGAG 59 NA Drosophila melanogaster 61 CG32264 FBgn0052264 FBtr0113431 1 1 5 140 3L 3754050 3767144 CAATAACGGAAACTGGTCACC 59 3723842 3723861 TGTTGTGCATCAGTCTTGTC 58 NA Drosophila melanogaster 61 CG12006 FBgn0035464 FBtr0073150,FBtr0073149 1 2 2 80 3L 3812403 3812480 GTGCTCATTGGTTTACTCGT 58 3812521 3812541 GTACGGAGTCACTATCAACTG 58 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 2 3 3 80 3L 4082635 4084745 AAACTGACGGCATATGATCTC 58 4082575 4082594 ATCGATTACCTTCAGCAGGA 58 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 3 3 6 124 3L 4095861 4097515 ACGAAAGAGGAATACTACCAGTC 59 4095759 4095777 CCATAGGGATTGTGGTGCA 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 2 3 6 122 3L 4095861 4097515 ACGAAAGAGGAATACTACCAGTC 59 4095761 4095779 ATAGGGATTGTGGTGCACC 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0073272,FBtr0073271,FBtr0300877 2 3 6 96 3L 4096037 4096055 TCCGACCAGGAGAGTAGTC 59 4095862 4095981 ACTGGTAGTATTCCTTCATCGAG 59 NA Drosophila melanogaster 61 ens FBgn0035500 FBtr0073268,FBtr0113135 2 2 6 86 3L 4129782 4130399 GTATCGTAAGGAAGATAGCGT 57 4129716 4129734 GGTATTGTCGGCATAAGGT 57 NA Drosophila melanogaster 61 ago FBgn0041171 FBtr0073246,FBtr0073247,FBtr0073245 3 3 3 92 3L 4247576 4247661 CGGATTAGAGCAAACGACAC 59 4247503 4247522 AACATCAAAGTCGAGGACCA 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 2 6 6 205 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419168 4419442 GATAAACGGACATGCAGGA 57 NA DesignRelaxed Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073295,FBtr0113140,FBtr0073296 3 4 6 239 3L 4418264 4418283 CAGGCGATGTAATTGAGGTC 58 4418485 4418790 CCTCCTCGTCTTCCTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11353 FBgn0035557 FBtr0073309,FBtr0073308 3 2 2 96 3L 4538172 4538264 CTATGTGAAATATCCCAAGGTGG 59 4538320 4538338 GAACTTGATGCTCAGTCCG 58 NA Drosophila melanogaster 61 CG11357 FBgn0035558 FBtr0073310,FBtr0113143,FBtr0113142 1 3 3 149 3L 4551933 4552116 CATATCGTTCCAAATGGCGG 59 4552225 4552246 CGTCTACCCAGAAGTATTTGGA 59 NA Drosophila melanogaster 61 Src64B FBgn0003501 FBtr0302594,FBtr0100508,FBtr0100505,FBtr0100507,FBtr0100504,FBtr0073321,FBtr0302593 3 7 7 177 3L 4595460 4595478 TTTGGCGAGGTCTTCTACG 59 4595240 4595319 TGTAAATGGGCTCCTCCTG 59 NA Drosophila melanogaster 61 shep FBgn0052423 FBtr0077173,FBtr0077174 2 2 5 122 3L 5160148 5161358 CAAACAAATGTTACGGCTTCG 59 5160046 5160065 TATGAAGCACCCAGATACCC 59 NA Drosophila melanogaster 61 CG10625 FBgn0035612 FBtr0273233 3 1 10 95 3L 5532471 5532490 AGACTACACAAGAAACGCGA 59 5532353 5532413 GGTCTTCACCTCTTCGGAG 59 NA Drosophila melanogaster 61 CG8398 FBgn0035708 FBtr0076980,FBtr0076981,FBtr0076978 3 3 3 81 3L 6609685 6609778 GTTCCAGATCTGATAATCTACTGC 59 6609818 6609836 GCGCTTTGAAGATGTCCAG 59 NA Drosophila melanogaster 61 dikar FBgn0052393 FBtr0076954,FBtr0076953 1 2 2 82 3L 6734855 6734874 GGAGATACCGTGTATTTCGC 58 6734730 6734810 ATTCGAGGTCCTCGATGTC 59 NA Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0076930,FBtr0300824 3 2 2 113 3L 7061657 7061675 GGCACTTACTCACTGAGCA 59 7061498 7061582 CATCAGGAACATCATCACCAC 59 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 3 5 5 99 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333862 7333988 AGTAGTCATAGTCCCTAAAGCC 58 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 1 5 5 98 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333861 7333987 GTAGTCATAGTCCCTAAAGCCA 59 NA Drosophila melanogaster 61 lark FBgn0011640 FBtr0076842,FBtr0076843,FBtr0076845,FBtr0076841,FBtr0076844 3 5 5 99 3L 7333784 7333802 AGAGATCGCATGTACGGTC 59 7333862 7333988 AGTAGTCATAGTCCCTAAAGCC 58 NA Drosophila melanogaster 61 Hn FBgn0001208 FBtr0076811 1 1 2 85 3L 7753745 7754669 TCCTTTGATAAGCCAACGC 58 7754718 7754736 AGAAGACAGGTGTTCCTGG 59 NA Drosophila melanogaster 61 Pdp1 FBgn0016694 FBtr0076777 1 1 7 83 3L 7813117 7846290 CATTAATGGCAGGAAATCTCC 57 7811290 7811311 CAGATGATCTCTTTGCTATTCG 57 NA Drosophila melanogaster 61 ldbr FBgn0035838 FBtr0076687,FBtr0076686 1 2 2 67 3L 8115190 8115208 TACCTGGATATGTGCTCCT 57 8115294 8115312 AATATGGTCAGCACTGGTG 57 NA DesignNoJunction Drosophila melanogaster 61 ImpE1 FBgn0001253 FBtr0076607,FBtr0076606 2 2 2 80 3L 8372406 8372961 CTGTTTGTCATCCCAGCTC 58 8373005 8373023 AGACAACTGCTATTGGCCA 59 NA Drosophila melanogaster 61 ergic53 FBgn0035909 FBtr0076626,FBtr0301629 1 2 2 66 3L 8529158 8529178 AGAAGCAGGAGTACAAGAAGG 59 8529280 8529299 TAGAACTCCTCCCAGTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0301158,FBtr0089568,FBtr0089565 3 3 13 178 3L 8627795 8627813 GACACGACTACCATGACAG 57 8628172 8631266 ATACTGGTTTGGAACTGTGG 57 NA Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 2 5 13 84 3L 8623725 8627691 TTCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 h FBgn0001168 FBtr0076569,FBtr0100153 3 2 2 83 3L 8670530 8670551 AACTCAAGACTCTGATTCTGGA 59 8670732 8670750 TCTTCTCCAGAATGTCGGC 59 NA DesignNoJunction Drosophila melanogaster 61 mfr FBgn0035935 FBtr0273285,FBtr0273289,FBtr0273287,FBtr0273291,FBtr0273290,FBtr0273286 1 6 7 80 3L 8899798 8899926 AGGACCTGATGGTAATCCG 58 8899736 8899756 CCTGCAGATAGATAATAGGCG 58 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0290106,FBtr0301137 1 2 5 80 3L 8929865 8930047 GATGAACTTTAGGAAAGTATCCGG 59 8929808 8929832 GACAATGTGGATATGATACTTGGAC 59 NA Drosophila melanogaster 61 path FBgn0036007 FBtr0076427 3 1 2 133 3L 9492179 9492275 GTTAACATAGTGGACAGCGG 58 9490255 9490273 AAGTCATTTCCAGCCAAGG 58 NA Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935 3 1 2 105 3L 9829383 9829401 GATTCACGATTGTCCAGCA 58 9829234 9829315 CTATCTGTGTTACGTCAGGC 58 NA Drosophila melanogaster 61 CG14164 FBgn0036057 FBtr0113157,FBtr0076359 1 2 2 80 3L 9887378 9887457 TTGATTTGCCCATGATCCG 58 9887316 9887334 CATTGGGATGATAGCTCCG 57 NA Nonspecific Drosophila melanogaster 61 CG6640 FBgn0036068 FBtr0076313,FBtr0076312 3 2 2 138 3L 10090955 10090973 GACATACGGACCACAACCA 59 10090286 10090855 GATAAAGATGAGACCAGCTGC 58 NA Drosophila melanogaster 61 CG32066 FBgn0052066 FBtr0076278,FBtr0076277 1 2 2 73 3L 10639969 10639987 CGTGCTGAAGTTCGATGAG 59 10634846 10634864 CGATGCGTCTGTAGTAGCT 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0076235 2 1 2 82 3L 11087696 11087718 CCCAATCAGATGCTTAAGAATCC 59 11087444 11087655 ACATCCATGGTGATCCTCTG 59 NA Drosophila melanogaster 61 Sug FBgn0036191 FBtr0300100,FBtr0273362,FBtr0273363 2 3 3 92 3L 11681180 11681259 CTACCATGCAGAGTCTGGT 58 11681314 11681333 CAGTGACCGACTCAAATAGC 58 NA Drosophila melanogaster 61 CG11652 FBgn0036194 FBtr0076131,FBtr0076130 3 2 2 141 3L 11688023 11688041 AAGCCACTTAGTCCTGGAG 58 11687836 11687920 ACTTGTAAGCCTTTAGCAACG 59 NA Drosophila melanogaster 61 CG11658 FBgn0036196 FBtr0076128,FBtr0076125,FBtr0076126,FBtr0076124,FBtr0076127 2 5 5 116 3L 11694671 11694689 ACTACATATGCGCCTTCCT 58 11694511 11694591 TGTCATTTACATGCGAGGC 58 NA Drosophila melanogaster 61 CycA FBgn0000404 FBtr0076075 1 1 2 80 3L 11825336 11825981 GGAAAGTTCAGGTCTTCCG 58 11825274 11825292 CCACATTCGATTTCTTGGC 57 NA Drosophila melanogaster 61 CG10948 FBgn0036317 FBtr0075939,FBtr0273237 2 2 3 83 3L 12838946 12840160 AATTAGCCACGGAACTTCG 58 12838881 12838899 GTCTATCGTAGTCCCGCTC 59 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075775 1 1 3 101 3L 14058247 14058697 AGGAGTCATCGGCTTTATCTC 59 14058760 14058778 CAGCGAGATCTCCAGATCG 59 NA Drosophila melanogaster 61 CG32138 FBgn0052138 FBtr0075776 2 1 3 158 3L 14061820 14061838 ATCGTACGCTTCACGAGAG 59 14062020 14063033 TATGACAGCTTCCTGTTGCT 59 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075693,FBtr0075692 1 2 2 64 3L 14786346 14786364 GTGATCATGAGCGATGAGG 58 14786870 14786888 TCCAGTGTATAACCACGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6854 FBgn0036478 FBtr0075634 1 1 3 199 3L 15091599 15103916 TTTCGCCTTATGAGCATGG 58 15104079 15104197 GTGTGGGACAACTTGAACC 59 NA Drosophila melanogaster 61 CG7945 FBgn0036505 FBtr0075600 3 1 3 128 3L 15516168 15516186 CATTTGCAAGACCTGAGGG 58 15515671 15516078 GTTAAATGGTCTGTCCAGAGC 59 NA Drosophila melanogaster 61 Mbs FBgn0005536 FBtr0301473,FBtr0301472 2 2 7 180 3L 16062035 16063229 GGCTCCAAGTTCAAGTTGG 59 16063436 16063454 AGTTGAGCGACTGATTGGA 59 NA Drosophila melanogaster 61 CG13049 FBgn0036592 FBtr0075477,FBtr0075476 3 2 2 104 3L 16274978 16275002 CTAATCACACCTAGCAAATCATACC 59 16274835 16274853 ATGGAAAGGAAGGAGACCA 57 NA DesignNoJunction Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 1 4 4 65 3L 16346788 16346806 ATCATCAACTTCACCCGGT 59 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Pdh FBgn0011693 FBtr0075427,FBtr0075426,FBtr0114537,FBtr0114536 2 4 4 66 3L 16346789 16346807 CATCATCAACTTCACCCGG 58 16346677 16346695 CACAAACTTGATGCCCGAG 59 NA DesignNoJunction Drosophila melanogaster 61 Nc73EF FBgn0010352 FBtr0112860,FBtr0075263,FBtr0075266,FBtr0075264,FBtr0075268 2 5 7 80 3L 16952972 16954606 CAGGAGCTACCAGATTCGAG 59 16954649 16954667 GAGTTGCCAGGCAATTCTG 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299645,FBtr0299642 2 2 7 111 3L 17527653 17531772 TAACAGTGATAACGACTCTGG 57 17531914 17531932 GATTCTGACATACGGGTCG 57 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0300520,FBtr0299642 1 2 7 188 3L 17534496 17536615 GTTCGGCGAATGAAGACAC 59 17536918 17536936 AGAATGTCCTTCCGTTGGG 59 NA Drosophila melanogaster 61 ftz-f1 FBgn0001078 FBtr0075086,FBtr0075087 2 2 2 86 3L 18747722 18748241 AAATTGTGCTTCGATTCTGG 57 18747591 18747609 TTCACGAATCATCGGTGAG 57 NA Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 3 3 3 80 3L 19719797 19719815 TCACTGGCGATCTCAAGAC 59 19719595 19719756 GATCTTTGTTGACCTCATCCAG 59 NA Nonspecific Drosophila melanogaster 61 CG42637 FBgn0261360 FBtr0302277,FBtr0302279,FBtr0302278 2 3 3 60 3L 19716991 19717012 ATAAAGGGTTATTCTGGCAACG 59 19716891 19716973 CACTCATCAAACTGACTTTGCT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 HLH106 FBgn0261283 FBtr0074873,FBtr0074875,FBtr0074874 1 3 3 81 3L 19789421 19789441 GCCACTATGACAGTAATGACG 59 19789484 19789562 AAACCTTCACCTTCCACGT 59 NA Drosophila melanogaster 61 Su(var)3-3 FBgn0260397 FBtr0074826,FBtr0074825 3 2 2 84 3L 20221372 20221390 CGTTTCACGATCTCCATGC 59 20221438 20221528 AGGTACACATCGCTAGGTC 58 NA Drosophila melanogaster 61 eRF1 FBgn0036974 FBtr0078174,FBtr0078178,FBtr0078175,FBtr0078173,FBtr0078177,FBtr0078176 2 6 6 80 3L 20344767 20344789 GAGATTATCACGGATAAGTCCCA 59 20344828 20345923 CTTGTAGCGTAAGATACCGC 58 NA Drosophila melanogaster 61 Pka-R1 FBgn0259243 FBtr0300528,FBtr0300531,FBtr0300532,FBtr0300535,FBtr0302637,FBtr0302643,FBtr0302639,FBtr0302638,FBtr0300533,FBtr0300534,FBtr0299892,FBtr0299891,FBtr0302642,FBtr0300529,FBtr0299893,FBtr0300530,FBtr0302641,FBtr0302640 1 18 18 116 3L 20826868 20826886 CAGCGATTACTTTGGCGAG 59 20826966 20827116 AACACGCGTTCAAATCTCG 59 NA Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0078304,FBtr0273212,FBtr0273213 1 3 4 85 3L 21205481 21205895 GACACTTGGAAATGTCTTCACC 59 21205941 21205959 GGTCTCCTGAATGGTGGAG 59 NA Drosophila melanogaster 61 CG11309 FBgn0037070 FBtr0078407,FBtr0078406 2 2 2 134 3L 21297182 21297399 CAAAGACAACGTCGTTACTG 57 21297067 21297085 ATCACTGCCGGTAATAGTG 57 NA InUTR Drosophila melanogaster 61 M6 FBgn0037092 FBtr0078355,FBtr0078356 2 2 2 92 3L 21504343 21504421 CTGATATGGATCGAAGCTGTG 58 21504475 21504493 CAGAAATCCGACGAACAGG 58 NA Drosophila melanogaster 61 CG7611 FBgn0037094 FBtr0078364,FBtr0301198,FBtr0078365,FBtr0301197,FBtr0078363,FBtr0078359,FBtr0078366,FBtr0078361,FBtr0078362 1 9 9 80 3L 21518749 21518768 CCTCTGCAACCAAGTTTAGG 58 21518810 21519096 GTGGCTCTAGGTCCTTAAGG 59 NA Drosophila melanogaster 61 CG7414 FBgn0037135 FBtr0078441,FBtr0114593 2 2 2 80 3L 21819504 21819583 ATTAGCAATGGGTTCAAGGT 57 21819626 21819644 CAACAATTCCTGACCCTGG 58 NA Drosophila melanogaster 61 Aats-ile FBgn0027086 FBtr0078500,FBtr0078499,FBtr0078498 2 3 3 80 3L 22282028 22282110 GGGAAAGCCCAAATACACG 59 22282154 22282172 GTGCCAGCAAGAATGTGTC 59 NA Drosophila melanogaster 61 AGO3 FBgn0250816 FBtr0299881,FBtr0301725,FBtr0299882,FBtr0299880 3 4 4 116 3L 23560302 23561655 TACGGATCTAAAGGTTCATCTG 57 23561732 23561750 AACAGAGTCAATGGGAGGA 57 NA Drosophila melanogaster 61 cpx FBgn0041605 FBtr0078899,FBtr0301771,FBtr0300790,FBtr0300789,FBtr0113343,FBtr0113337,FBtr0100500,FBtr0078898,FBtr0100499,FBtr0078902,FBtr0301769,FBtr0078901,FBtr0078897 2 13 21 175 3R 120845 120863 CTGTAGGAGGTGATGGAGG 58 120999 121301 CTTGATGTTGTACTTATCGCGA 59 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 2 3 4 106 3R 151087 151105 TCTGACCAGATCAATCCGG 58 151175 151428 TTTCTCAAGGGTACGGAGG 58 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 6 10 83 3R 570241 570259 AAAGTTTGGAGGTCTTCCC 57 569895 570197 TTCAGTTGAGTATCCATATCGG 57 NA Drosophila melanogaster 61 Cdep FBgn0051536 FBtr0110958 2 1 2 80 3R 749540 751276 AACTTCCAAAGGTCTCAGTC 57 751318 751337 GGAATTCACATACGTATGCG 57 NA Drosophila melanogaster 61 CG12163 FBgn0260462 FBtr0078823 1 1 2 100 3R 1077213 1077231 CAGTTGCGCTTGTATTGCT 59 1069962 1077149 TGAAGATTCCGTGCTCTCC 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110932,FBtr0100197,FBtr0273432,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0273431,FBtr0078810 2 12 19 92 3R 1119844 1119862 TGAACAAGTCGGGAGACAC 59 1119079 1119789 CGATTGAGGAACGTCTTGAG 58 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078812 2 1 19 117 3R 1117791 1118370 TCCTGGGAGCTTATAAAGGC 59 1100791 1100809 CTGTGCTCATTGACAGCAC 59 NA Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687 1 1 2 81 3R 1356993 1357011 AAGACGCTTCTGTCCATCC 59 1357052 1357144 CTTCGACAGAATCAATATCCGTG 59 NA Drosophila melanogaster 61 Pi4KIIalpha FBgn0037339 FBtr0078755 3 1 4 96 3R 1385909 1386511 CTGAGGAACCTCTATGACCC 59 1385832 1385850 TACCCTGGTAAATGCGCTC 59 NA Drosophila melanogaster 61 CG12746 FBgn0037341 FBtr0290215,FBtr0078692,FBtr0078689 1 3 3 80 3R 1392050 1392070 GGAAACTCTAATGCGAAGCTC 59 1392107 1392198 CTCCAACTTGAAGAAGGTAATGAC 59 NA Drosophila melanogaster 61 jagn FBgn0037374 FBtr0078624,FBtr0078625 3 2 2 122 3R 1605223 1605526 GCACATATCAAATTAGCCTGC 58 1605610 1605628 AGATATCCAGGTGGTCCAG 57 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081684 2 2 4 106 3R 2480293 2480311 GAACGTATCAATGCGCCTG 59 2480381 2480943 TCCATGGATTCATCTGCCA 58 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0081686,FBtr0081685 1 2 4 82 3R 2479835 2480203 TGGATGAAGATCTCCAATGCT 59 2480247 2480265 GTTCTCGTCTTCGGAGACC 59 NA Drosophila melanogaster 61 bcd FBgn0000166 FBtr0081666,FBtr0081668 1 2 5 98 3R 2584143 2584201 CAAGCCAGATGTCTTTCCC 58 2584063 2584082 TCTGCTATTTGAGAGCTGGT 58 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081648,FBtr0081651,FBtr0081649,FBtr0081656 1 4 11 91 3R 2724251 2734255 GTCAGTTTGAACGCAAACG 58 2724178 2724198 GGTCAAGTAGCGATTGAAGTG 59 NA Drosophila melanogaster 61 Antp FBgn0260642 FBtr0081652,FBtr0081650,FBtr0081647,FBtr0081654,FBtr0081653,FBtr0081655 2 6 11 80 3R 2724256 2734249 TTGGTAAGTGTCAAGAACGC 58 2724195 2724216 AGTGAAACTCCTTCTCTAGCTC 59 NA Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 1 2 2 80 3R 2909299 2909421 TGCATGCTAGGTATTCAGCA 59 2909238 2909256 GATCCTGTACCACCATCGG 59 NA Drosophila melanogaster 61 alpha-Est7 FBgn0015575 FBtr0081550 1 1 2 95 3R 3346786 3346864 GGGCTTTGGGATTTATGAGTC 59 3346711 3346729 TCTTGATCCACTTGAGGGC 59 NA Drosophila melanogaster 61 CG3014 FBgn0037519 FBtr0081773 3 1 2 85 3R 3627696 3627716 GAATCCGGTTTACAACAGTGG 59 3627567 3627650 CATATACGGCATTGACTCGC 59 NA Drosophila melanogaster 61 dsx FBgn0000504 FBtr0081760,FBtr0081761 1 2 3 91 3R 3761545 3761565 CTGATGCCACTCATGTATGTG 59 3761360 3761492 TTCACAACGTATTGGCCCT 59 NA Drosophila melanogaster 61 CG2747 FBgn0037541 FBtr0081818,FBtr0300916,FBtr0300917,FBtr0081817 2 4 4 85 3R 3843986 3844004 AACTGGAGCTACAGGTCAC 59 3842717 3843939 CATCTGAATATGGTTCTGCGG 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081845,FBtr0081846,FBtr0081844 2 3 3 95 3R 4184857 4184932 GGCTGCTAACGATATGAACG 59 4184990 4185008 CTCTCCTCAATCGGACGAC 59 NA Drosophila melanogaster 61 stck FBgn0020249 FBtr0081846 1 1 3 89 3R 4184116 4184200 AAGGCTGAAGTAGTCCAGG 58 4184253 4184271 AATCTTCTCAGTCGGCTCG 59 NA Drosophila melanogaster 61 CG8036 FBgn0037607 FBtr0081882,FBtr0081881,FBtr0081883 2 3 3 138 3R 4499022 4499108 ATCACTACCAGCAAGGAGG 58 4499209 4499228 ATGCCGAACATATCGATGAG 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111031,FBtr0082037 3 2 14 97 3R 5260132 5269739 AAGCTTTGTTCGAGTGAGTC 58 5270766 5270784 ATGTGATACGTTGTCTCGC 58 NA Drosophila melanogaster 61 ps FBgn0261552 FBtr0111029,FBtr0111028,FBtr0111027,FBtr0302693,FBtr0302692 1 5 14 95 3R 5258552 5269741 TTCAGTTCCGGTGAGTCAG 59 5270766 5270785 CATGTGATACGTTGTCTCGC 59 NA Drosophila melanogaster 61 mura FBgn0037705 FBtr0082116,FBtr0082117 2 2 3 90 3R 5367726 5372532 CAAACCCAAATTGCCACAG 58 5367654 5367673 TTATTCCCGTTGTTGTAGCC 58 NA Drosophila melanogaster 61 Kap-alpha3 FBgn0027338 FBtr0301189,FBtr0082108,FBtr0082106,FBtr0082107 2 4 4 94 3R 5401288 5401373 ATACTTCACTGATGAGGGCG 59 5401213 5401231 TCATCGTTAGCCTATCGGC 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 2 3 5 82 3R 5701879 5701897 CGATGTCGTCAAACACGAC 59 5701943 5756101 TCAGCTCAATGGGTTCCTC 59 NA Drosophila melanogaster 61 CG34360 FBgn0250818 FBtr0114581,FBtr0112576,FBtr0114582 3 3 5 106 3R 5701849 5701867 CTTCACCTACAATGGACGC 58 5701936 5756095 CAATGGGTTCCTCATTTCCA 58 NA Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 2 5 5 80 3R 6041340 6042793 GGGTGGATGAGATATCCGAG 59 6042836 6042854 ACTCTCGTCCATCTTTGGC 59 NA Drosophila melanogaster 61 CG11870 FBgn0037804 FBtr0090031,FBtr0090030,FBtr0090032 3 3 4 86 3R 6121772 6122462 TGTGGCTGAAATCTTCACC 58 6122511 6122530 ATTTCAGGGTAATCGAAGCC 58 NA Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 3 2 2 153 3R 6162872 6162954 AAAGAAAGAGCATCTTGCCAG 59 6163069 6163087 TACATCCTTCTTCAGCGCC 59 NA Drosophila melanogaster 61 CG14681 FBgn0037820 FBtr0100118,FBtr0100117 3 2 2 81 3R 6515420 6515438 AACATTGTCATCGTGGACG 58 6515483 6515979 CCCAGAATTTGGCATCTGG 58 NA Nonspecific Drosophila melanogaster 61 pug FBgn0020385 FBtr0100144,FBtr0082266,FBtr0082264,FBtr0082265 2 4 4 85 3R 6525748 6525766 GGAGATCGGTATCGATGCC 59 6525809 6525956 CGTTCAGATCGTTTATCTTATCGAG 59 NA Drosophila melanogaster 61 RpL3 FBgn0020910 FBtr0082346,FBtr0082348,FBtr0302585 1 3 5 81 3R 7048437 7049125 CTTCTACAAGAACTGGTACAAGAG 59 7049165 7049183 CTTCTTGCCGAGATCATCG 58 NA Drosophila melanogaster 61 CG14715 FBgn0037930 FBtr0082423 1 1 1 102 3R 7500081 7500099 CATTAAGAAGCGGGTGGAG 58 7500228 7500246 GCTATCGAACTCTGTTCCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082519 1 1 4 126 3R 7647528 7648152 CTTAATTTATGCTACGCAGCTG 58 7647423 7647441 GGCAGATCGAATTTCTCCA 57 NA InUTR Drosophila melanogaster 61 CG6950 FBgn0037955 FBtr0082519 3 1 4 127 3R 7647528 7648152 CTTAATTTATGCTACGCAGCTG 58 7647422 7647440 GGGCAGATCGAATTTCTCC 58 NA InUTR Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 2 2 2 80 3R 8813013 8813033 GTATGCTTACCGAGAATGGAG 58 8813073 8813169 AATTTAGGACTTGATCGGCAG 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 2 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257204 GGATGGATCTTTGACAATGGA 58 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 2 3 4 80 3R 9257246 9257398 CAGCTCAGTGTTAAGAGCG 58 9257184 9257204 GGATGGATCTTTGACAATGGA 58 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082851,FBtr0300590 3 2 3 81 3R 9484276 9484366 CAACAAGGGTAACCAGGGT 59 9484213 9484231 CATATTTCCACCCTGGCCA 59 NA Drosophila melanogaster 61 B52 FBgn0004587 FBtr0300586,FBtr0082802,FBtr0082803,FBtr0082801,FBtr0300589,FBtr0300588,FBtr0082804,FBtr0082806 2 8 8 82 3R 9487884 9487905 AATTCGAAGACTATCGTGATGC 59 9487948 9488031 TTCAACAACCACACGTTCG 59 NA Drosophila melanogaster 61 primo-2 FBgn0040076 FBtr0091746,FBtr0091745 2 2 2 67 3R 9536736 9536948 CCTATTATGACATTGGTGAAGC 57 9536690 9536708 ATTCCTACACGCTATGCTG 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 trx FBgn0003862 FBtr0082950,FBtr0082948,FBtr0082947,FBtr0082949,FBtr0100277 3 5 5 80 3R 10090933 10090954 ATAACCTTGTAGTTGATGCCAC 58 10090814 10090892 TCGAATAGCAATTCGGCTC 58 NA Drosophila melanogaster 61 CG6125 FBgn0038337 FBtr0083106 1 1 2 177 3R 11231021 11231112 CATTTACGATCCTGGCTGC 59 11230862 11230882 TCGATCGTAACTGGTAATCCA 58 NA Drosophila melanogaster 61 CG4699 FBgn0038364 FBtr0301726,FBtr0301732,FBtr0301727,FBtr0301729,FBtr0301731,FBtr0301730,FBtr0301728 2 7 7 81 3R 11625958 11625976 GGACTACGTCTAGCAAGCT 58 11626020 11626202 GGCATCACAGTGTAAGACTC 58 NA Drosophila melanogaster 61 pnr FBgn0003117 FBtr0083221,FBtr0083220 1 2 2 95 3R 11865261 11865347 GGAGCATGATCTCAAACCC 58 11865406 11865424 AAGGTGCTACTACTGCTGG 59 NA Drosophila melanogaster 61 CG14881 FBgn0038425 FBtr0083288,FBtr0083287 1 2 2 60 3R 12260762 12260783 CTGGTCGATGAGTATTATACGA 57 12260864 12260882 AATTAGCAGTCACCTGCTG 57 NA DesignNoJunction Drosophila melanogaster 61 cher FBgn0014141 FBtr0290015,FBtr0290013 2 2 5 141 3R 12920462 12923770 AACACATCAAGCTGAAGTCAG 58 12920341 12920361 TTCTCCGTTGTATTTGACCAC 58 NA Drosophila melanogaster 61 Dscam3 FBgn0261046 FBtr0113397,FBtr0113398 2 2 4 149 3R 13308944 13309026 AATGTGAATGAACCCGCAC 59 13308813 13308833 GTTATTCAGATCGATGCGTCC 59 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 2 4 4 107 3R 13533849 13533867 CTCAATATTCGCCGTACCC 58 13533696 13533778 GATTCGGTTCGGGATACTG 57 NA Drosophila melanogaster 61 tinc FBgn0038554 FBtr0089770,FBtr0089772,FBtr0089771,FBtr0089769 1 4 4 80 3R 13678336 13678354 ATCTGGTACGGAGTGATGC 59 13678397 13678747 CAAAGAGCATCCCAAGAACC 59 NA Drosophila melanogaster 61 sr FBgn0003499 FBtr0301615 3 1 3 196 3R 13956240 13956825 AGGAAGAATCAAGCAACGC 58 13956985 13957003 GAACATGGTCTTGTCCGGA 59 NA Drosophila melanogaster 61 14-3-3epsilon FBgn0020238 FBtr0083565 1 1 4 82 3R 14073865 14073946 AGGCAGAAGAAGTAGACCC 58 14073992 14074010 TTACGACACGTCCTGATCC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 3 14 14 84 3R 14260010 14260031 AAGAACTCATCATCCAACTGTG 58 14258531 14259965 TGAAGTTGGCCTGAGAGTC 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083641,FBtr0083643,FBtr0083645 2 3 14 91 3R 14340832 14340850 AACATCGAAACGGATGTGC 59 14261498 14340778 TGGTCAGTGTTGTACCTAGG 58 NA Drosophila melanogaster 61 gukh FBgn0026239 FBtr0089768,FBtr0100317 3 2 4 125 3R 14844197 14846661 GTGAAGAAGGGTATCAACGT 57 14846749 14846767 GCAGTGTCCAATAGATGGG 58 NA Drosophila melanogaster 61 CG11779 FBgn0038683 FBtr0100549,FBtr0083749,FBtr0100548 1 3 4 84 3R 14985382 14985401 TCCATTCATCAACTTTCGGA 57 14982254 14985338 GGCAGCTATTCTGTAAATATCG 57 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301692 2 1 3 81 3R 15060041 15060059 GAAACTTTGGTGACCACCC 59 15059900 15059996 CATTCTCCAGGGACAAGGG 59 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110917 2 1 8 81 3R 15287178 15302856 AAGACAATGGATGAAAGACAGC 59 15302893 15302916 TACACTGGGTATCGATAAGATGTG 60 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918 3 1 8 83 3R 15302750 15302855 GGCTCGAGATGAAAGACAG 58 15302902 15302920 GGTGTACACTGGGTATCGA 58 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0301378 3 1 7 89 3R 15579579 15586001 ACAGGAGTACAGTGTGCAG 59 15586053 15586132 AGATACTTTAGGCGACCCTG 59 NA Drosophila melanogaster 61 CG33934 FBgn0064119 FBtr0301700 3 1 3 85 3R 15873373 15873391 ACAAACTTTGGATGCCTGC 59 15873440 15873529 CAAATCCACCTCCCAACAG 58 NA Nonspecific Drosophila melanogaster 61 CG34139 FBgn0083975 FBtr0301074,FBtr0301075,FBtr0301680 1 3 3 84 3R 16042881 16045582 GGAAATAGGAATGAAGCCGC 59 16045629 16045647 ATGAAGCTCCGGTATCAGG 59 NA Drosophila melanogaster 61 cic FBgn0028386 FBtr0083872 1 1 2 147 3R 16122211 16124113 AGATCTTAGAGCTGCCCAC 58 16124223 16124242 GGCGAAGAACATCTTCTGAC 59 NA Drosophila melanogaster 61 CG42668 FBgn0261550 FBtr0302668,FBtr0302667,FBtr0302672,FBtr0302669 2 4 8 89 3R 16143994 16144706 GAATCTCCTACAAAGAATCGCA 58 16145293 16145311 TTGAGTTTAGCGGCATCAG 58 NA Drosophila melanogaster 61 CG5191 FBgn0038803 FBtr0083907,FBtr0083906,FBtr0083904,FBtr0083908,FBtr0083905 3 5 5 84 3R 16396364 16396823 GTCGACAGGTAAATCCTCTG 57 16396870 16396888 ACGTTGTCTATCTCCCGAG 58 NA Drosophila melanogaster 61 Atpalpha FBgn0002921 FBtr0089510,FBtr0089513,FBtr0089509,FBtr0089511 1 4 9 111 3R 16792917 16798908 AACTCAAGGTTGATTTCGATGG 59 16798980 16798998 GTTTCTTGGGCAAGAAGCC 59 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0084019,FBtr0084018 2 2 16 158 3R 16980783 16980964 CATGCCCACGTCTAATTATGG 59 16981084 16981102 ATGTCGAAGTCCCATTCGG 59 NA Drosophila melanogaster 61 mod(mdg4) FBgn0002781 FBtr0084077 2 1 22 81 3R 17177600 17200791 GAGGCTCAAGGTACCTCAC 59 17177537 17177557 ACTCATGTCTGTCGATTACCA 59 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 1 4 4 85 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404214 17404293 GCTGTCGAACTGATAATAGCC 59 NA Drosophila melanogaster 61 Caki FBgn0013759 FBtr0301328,FBtr0112872,FBtr0112873,FBtr0084162 2 4 6 90 3R 17617280 17617303 GTTACCTTCAAGATAGTTCCTTCG 59 17615473 17616439 GCACGAATATAAGCACCGG 59 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 1 2 2 78 3R 17841000 17841018 CTCACGAATATCCAGCCGT 59 17841133 17841151 ACTTCTCGTGCTTAGCCAG 59 NA DesignNoJunction Drosophila melanogaster 61 how FBgn0017397 FBtr0084178,FBtr0301402,FBtr0084177,FBtr0301401,FBtr0100514 1 5 5 86 3R 17888573 17894846 ATCCAGATTTCAACTTTGTCGG 59 17894893 17894911 TAATCTTGCAGCCGGTCTC 59 NA Drosophila melanogaster 61 CG6954 FBgn0039000 FBtr0084300 1 1 2 89 3R 18501842 18501860 ACCTCCACATCATCGTCAC 59 18501910 18502641 CAATATGTTGTCATCGATGGCA 59 NA Drosophila melanogaster 61 orb FBgn0004882 FBtr0100228,FBtr0084386 3 2 6 174 3R 19093390 19093550 TACGTGTGAATTTGCTGTCTG 59 19093236 19093256 TGCTCGTAGTTCCTGTTTAGG 59 NA Drosophila melanogaster 61 CG4374 FBgn0039078 FBtr0084427 3 1 1 166 3R 19237992 19238010 GTGGTACGAGAACCAACAG 58 19237713 19237731 ACTGTTGTCCTTGTCCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG10254 FBgn0027512 FBtr0084476,FBtr0084477 1 2 2 80 3R 19516878 19516898 GCAAGTACAACGAAATGTTCG 58 19516755 19516839 CGCCAGAATCATTCTTAGTACG 59 NA Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 2 4 4 81 3R 19554870 19555665 TGTGAAGAGAAGCCTGGAC 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 CG10217 FBgn0039113 FBtr0084464,FBtr0084465 1 2 2 80 3R 19588320 19588341 TCTTTAACGAGAACTTTGTGCC 59 19588143 19588279 GGAATCGGTTCTGGTACGT 59 NA Drosophila melanogaster 61 CG5515 FBgn0039163 FBtr0084574,FBtr0084575 1 2 2 80 3R 20014178 20014251 TGGCGATATGGAGATTCTCG 59 20014117 20014135 TCCTCCGAACTGTACTCCT 59 NA Drosophila melanogaster 61 CG6454 FBgn0039187 FBtr0273324 1 1 2 81 3R 20175946 20177782 ACTGATCGAAGAATCCAGCT 58 20177826 20177844 TATGTTGGACGGTCCAGTG 59 NA Drosophila melanogaster 61 nct FBgn0039234 FBtr0084705,FBtr0301865,FBtr0084706 1 3 3 80 3R 20677647 20677717 GCTGTTCCTCAACCTACTC 57 20677758 20677779 TGCTAAGAAGAAATTCCAGGTC 58 NA Drosophila melanogaster 61 CG10899 FBgn0039235 FBtr0084732 1 1 2 80 3R 20682616 20682691 ATAAGGAACCTTGAGGATCCG 59 20682556 20682579 CAACTTAGTTATGCTGGATACCTG 59 NA Drosophila melanogaster 61 5PtaseI FBgn0259178 FBtr0299661,FBtr0299662 1 2 3 82 3R 20869000 20869020 CAATGAGATTATCCAGAGCGA 57 20868394 20868957 AGTAAACAGGCTTATGGTCG 57 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089987,FBtr0089984,FBtr0089985,FBtr0089982,FBtr0089986 3 5 6 88 3R 21182006 21182024 TTCATGTCTGTGCACACCT 59 21180028 21181956 GTGATTTGTGCCATATAGCGA 58 NA Drosophila melanogaster 61 exo84 FBgn0260946 FBtr0084978 2 1 2 81 3R 21877633 21877707 AGGAGATATCACGTAATCTCGA 58 21877573 21877591 ATGGTGGCCAGAATATTGC 58 NA Drosophila melanogaster 61 Tusp FBgn0039530 FBtr0302589,FBtr0302590 3 2 2 82 3R 23455225 23455303 TAGATCGGATGTTATCCTGGTC 59 23455346 23455364 ACACAAAGATGATGCCCGA 59 NA Drosophila melanogaster 61 CG5508 FBgn0027579 FBtr0085251,FBtr0085249,FBtr0085250 1 3 3 81 3R 23758114 23758197 CATCTATGCCGAAAGCATATCC 59 23758239 23758257 GCAAACCTCGATCACAGAC 58 NA Drosophila melanogaster 61 Pkc98E FBgn0003093 FBtr0301516 1 1 2 131 3R 24867952 24870097 GAGTTTATCTGTCTGCACGT 58 24870250 24870268 TTCACATTGAACCTCTGGC 58 NA Drosophila melanogaster 61 Ptp99A FBgn0004369 FBtr0100523,FBtr0085423,FBtr0085422,FBtr0110981 2 4 5 86 3R 25297564 25298887 CTGCAGAACTTACGACCCT 59 25298937 25298955 AATCTGATCGGAGGGTTCG 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 1 6 6 80 3R 25690533 25690618 TAATCAAGATCCTTCTAGTCACCC 59 25690476 25690495 TCCACGATCGTGAAGATCAG 59 NA Drosophila melanogaster 61 CG7816 FBgn0039714 FBtr0089925,FBtr0089924,FBtr0089922,FBtr0089920,FBtr0089923,FBtr0089921 3 6 6 80 3R 25690537 25690622 GCGATAATCAAGATCCTTCTAGTC 59 25690480 25690500 CGATCGTGAAGATCAGTATGC 59 NA Drosophila melanogaster 61 RpL32 FBgn0002626 FBtr0114556,FBtr0085592,FBtr0085593,FBtr0085594,FBtr0114555 1 5 5 80 3R 25871338 25871418 TAAGCTGTCGCACAAATGG 58 25871276 25871294 GGCATCAGATACTGTCCCT 58 NA Drosophila melanogaster 61 sima FBgn0015542 FBtr0114597 3 1 2 128 3R 25907928 25907946 TCCCGCTACAGATTTCTGG 59 25908036 25945863 CGGAATCGTCATCCTTATGAC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 8 13 153 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419563 26420549 GTAGAGTTTCTGGTCGGTG 57 NA Drosophila melanogaster 61 Ptx1 FBgn0020912 FBtr0089390,FBtr0273386,FBtr0089389,FBtr0089391 2 4 4 210 3R 26749269 26750041 ATCGCAAAGATGGCAATCG 59 26750215 26750233 ATGTCCGGATACCTGTTCC 58 NA DesignRelaxed Drosophila melanogaster 61 CG11334 FBgn0039849 FBtr0085808,FBtr0085809 2 2 2 171 3R 27286783 27286801 CAAGAAATCACTGCGGCAG 59 27286572 27286648 CGCGTCCAGAAATCTATGC 59 NA Drosophila melanogaster 61 ttk FBgn0003870 FBtr0085827,FBtr0085825,FBtr0085829 2 3 6 80 3R 27554133 27554154 CCTCGAAACGATCAAAGAACTC 59 27554193 27558653 TAGTAGGAGTAACGGAAGTGC 59 NA Drosophila melanogaster 61 CG1910 FBgn0022349 FBtr0085841 2 1 4 136 3R 27574766 27574940 GAATATCAGAAACGCACTCCC 59 27575038 27575056 GTTCCTCGAGTGCTAGACC 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300265,FBtr0300270,FBtr0300267,FBtr0085888,FBtr0085880,FBtr0300266,FBtr0112866,FBtr0300268,FBtr0085881,FBtr0300263,FBtr0112864,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0112865,FBtr0085884,FBtr0085878,FBt 2 22 22 80 3R 27690344 27690865 TTAAATGAGGAGATGGTCACG 57 27683659 27683679 CAGAATCTTTACACGTTGCAC 58 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 Ank FBgn0011747 FBtr0089172,FBtr0089171,FBtr0300498,FBtr0300497,FBtr0089174,FBtr0089173 3 6 6 85 4 142537 142555 TACAACATGAGGCTAGTGC 57 142417 142489 AATATCCGCCTGATTAGCAC 57 NA Drosophila melanogaster 61 CG1674 FBgn0039897 FBtr0300800,FBtr0300797,FBtr0089116,FBtr0300799,FBtr0300798,FBtr0300796 2 6 7 141 4 264204 264271 ATACAAATGCCGTTGCTTCC 59 264373 265824 TCTTTCGGAACGTATAAGCCT 59 NA Drosophila melanogaster 61 PMCA FBgn0259214 FBtr0300556 2 1 6 135 4 350045 363558 TGCAAACACAAATACGAGTGG 59 349930 349948 GAAGACGTTTCCGAAAGGC 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 3 6 7 83 4 470582 470875 TAAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 CG1732 FBgn0039915 FBtr0089971 1 1 2 84 4 654474 654595 CTGTATTACACAATTAGCGGCT 59 654640 654658 GATCCACTCCATAGCACCA 58 NA Drosophila melanogaster 61 MED26 FBgn0039923 FBtr0089253,FBtr0089254 1 2 2 80 4 803969 803989 GTCAACAAATCGAGATCTGCC 59 803853 803932 GGAGAATTCATTGAAGTGTCTGAG 59 NA Drosophila melanogaster 61 CG11148 FBgn0039936 FBtr0300883,FBtr0300882,FBtr0300884 1 3 5 115 4 886473 886570 CACTTGGCAATAACCGCTC 59 886376 886396 GTATATCGGATGATAGGCCGA 58 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 3 4 7 180 4 1080190 1080208 AACACAACCTCTCAACAGC 58 1079961 1080047 ATGAGAAGAGTCCATTGCAG 57 NA Drosophila melanogaster 61 Zyx102EF FBgn0011642 FBtr0089214,FBtr0089216,FBtr0089212,FBtr0089211 1 4 7 147 4 1079970 1080058 CGTTAATGAAACTGCAATGGAC 58 1079844 1079865 AAGCTCACTGTATGAAGAACTC 58 NA Drosophila melanogaster 61 CG33521 FBgn0250819 FBtr0091473,FBtr0091471,FBtr0091472,FBtr0091470 2 4 4 109 4 1210219 1210237 AACCGATTTGAGAACGGTG 58 1210308 1210519 GCTTTGCTTATTCCAGATTCG 58 NA Drosophila melanogaster 61 Caps FBgn0053653 FBtr0091631 1 1 3 80 4 1247982 1248073 TAATCACAGTACACCGTCGT 58 1248865 1248883 TCCTCTGAATCACCCTCCA 59 NA Drosophila melanogaster 61 ewg FBgn0005427 FBtr0100581,FBtr0100580 1 2 8 80 X 167264 167284 ATGGAGCTTTCAAATCCTCCT 59 165635 167222 TTGCGTGGTGTAATTGCTG 59 NA Drosophila melanogaster 61 CG32817 FBgn0052817 FBtr0300328,FBtr0070077 2 2 2 71 X 373966 374071 GCGTGACTTTATTTGGTAATCG 58 374103 374121 TGAGGAACATCTGGCAGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Dredd FBgn0020381 FBtr0114561,FBtr0114560,FBtr0114559 3 3 3 80 X 528075 528165 ATGAGCTCTTTAGGATAGACGTG 59 528017 528035 CATTTACCGTGGACATGGC 59 NA InUTR Drosophila melanogaster 61 eIF4E-7 FBgn0040368 FBtr0070252 1 1 1 111 X 1056336 1056354 GACCTAAGCGGTATTCGGA 59 1054090 1054108 TTCTCGGATTGGCAAAGTC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nmdar2 FBgn0053513 FBtr0070288,FBtr0301843,FBtr0091454,FBtr0091453,FBtr0301842 3 5 6 163 X 1383725 1383743 AGAAGGTCATGGACAAGCA 59 1380609 1383484 TTCCGTCTTGTACGACCAC 59 NA Drosophila melanogaster 61 CG14798 FBgn0029588 FBtr0089694 1 1 1 171 X 1587254 1587272 TCACGTCTCGTGAGTTTCC 59 1587468 1587486 TCATGGGATCCTTGGTCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Adar FBgn0026086 FBtr0070299,FBtr0100557,FBtr0070300 1 3 3 80 X 1674794 1674813 AATAGTCTCCAGGCGTTGTC 59 1674856 1675766 GACTGATATGCTGTGGCCT 59 NA Drosophila melanogaster 61 CG42666 FBgn0261548 FBtr0302659,FBtr0302654,FBtr0302657,FBtr0302658,FBtr0302655,FBtr0302656 3 6 6 91 X 1738113 1744665 CATCGAAGACAAACTCCTAGG 58 1744715 1744736 CGCTACTGGAGTCTATATCCTC 59 NA Drosophila melanogaster 61 egh FBgn0001404 FBtr0070440,FBtr0070439 2 2 2 91 X 2490994 2491012 CAAGCTCTTTCACAAGCCG 59 2491378 2491396 TTCCGTTGTCAAAGGACAC 58 NA DesignNoJunction Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0112828,FBtr0070469,FBtr0070473,FBtr0070470 3 15 15 80 X 2567068 2567086 GCATGGAGGGTAATCACAC 58 2567128 2567219 GTATTGAGAGCTCATGCTCTG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 kirre FBgn0028369 FBtr0070560,FBtr0070559 2 2 2 98 X 3024709 3024783 ACTCCGATCAGGTTGTTGG 59 3024844 3024863 GAAATCCATTGACCACAGCC 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070509 2 1 12 157 X 3140221 3140338 TATTGCCGGTACCTCTTCG 59 3140458 3140477 AAGTCTCGTTCGAATTGCTG 59 NA Drosophila melanogaster 61 CG12206 FBgn0029662 FBtr0070528,FBtr0070529,FBtr0070527 3 3 3 82 X 3360656 3365919 GCCCAATGTCAAGAACTATATGG 59 3360596 3360614 ATGTGTCCCTGATGATGCC 59 NA Drosophila melanogaster 61 Mnt FBgn0023215 FBtr0301825,FBtr0301821,FBtr0070579,FBtr0301822,FBtr0070578,FBtr0301824 2 6 7 80 X 3593450 3593471 CTAAAGCAACTGAGCTTAAGGA 58 3593512 3593727 CAGACAAACTGCTTTGTCG 57 NA Drosophila melanogaster 61 CG2930 FBgn0028491 FBtr0070608,FBtr0070609,FBtr0070610 3 3 3 172 X 3770263 3770353 GGGTCAGCAGAAGAAACTG 58 3770547 3770568 ACATGGTGAAGATATGGAAGAC 58 NA Drosophila melanogaster 61 CG15376 FBgn0029692 FBtr0070623 3 1 1 71 X 3982330 3982351 ACTTAAGTCAGACATCAATGCC 58 3983864 3983882 CCACTCAATGGAGAAGCCT 59 NA DesignNoJunction Drosophila melanogaster 61 norpA FBgn0004625 FBtr0070651,FBtr0301475,FBtr0070650 2 3 5 84 X 4248514 4248532 AGAACTTGCGTCTCATCAC 57 4248580 4251087 CTCAATCGCATCCAATGCT 58 NA Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 1 3 4 91 X 5794984 5795002 AGACACCAAACCGAAAGAC 58 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Act5C FBgn0000042 FBtr0100663,FBtr0100662,FBtr0070822 2 3 4 92 X 5794983 5795002 GAGACACCAAACCGAAAGAC 59 5796733 5796751 AGCAACTTCTTCGTCACAC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Atx-1 FBgn0029907 FBtr0299814 3 1 1 68 X 6717640 6717658 TCACCTTCAGCTACGACAC 59 6717743 6717761 CAAACATTGGATGACCCGG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 Sxl FBgn0003659 FBtr0100202,FBtr0300843,FBtr0300841,FBtr0100200,FBtr0100209,FBtr0100215,FBtr0100207,FBtr0300839,FBtr0100210,FBtr0100205,FBtr0100212,FBtr0100201,FBtr0100206,FBtr0300842,FBtr0100203,FBtr0100211 1 16 21 282 X 6978842 6979199 CTTTGTTCGGTACAACAAGC 58 6978579 6978597 ATCGAAATAGGGATGCGAG 57 NA DesignRelaxed Drosophila melanogaster 61 Trf4-1 FBgn0030049 FBtr0071212,FBtr0112963,FBtr0071213,FBtr0112964 1 4 4 80 X 8458337 8458356 TAGTCGAGATCTTTGGCTCC 59 8458398 8458525 CCCACAAACCTAACACAACG 59 NA Drosophila melanogaster 61 rdgA FBgn0261549 FBtr0302664,FBtr0302665,FBtr0302660,FBtr0302662 2 4 6 93 X 8917352 8918117 TGGAAGAGCCCTATACTGG 57 8918297 8918315 CTTGTTCATGTAGTGCACG 57 NA Drosophila melanogaster 61 RpS28b FBgn0030136 FBtr0071360 3 1 1 264 X 9448844 9448862 GAACCGCCAGATTATCCGA 59 9449157 9449175 TTCTGGCGAATTAGGTGTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG1889 FBgn0030164 FBtr0071408,FBtr0112969 1 2 3 82 X 9859730 9859748 TTGGTGGATCTGCGAAGAG 59 9859792 9859878 ATGTCTAGGAATCGAGATGCC 59 NA Drosophila melanogaster 61 Imp FBgn0030235 FBtr0073418,FBtr0073415,FBtr0073414,FBtr0073416,FBtr0073420,FBtr0073413,FBtr0073419,FBtr0073417 2 8 10 96 X 10692565 10692660 GAATAAGGGTGAAATTTGCCTC 58 10692490 10692509 CTGCATGATCCGTTTAATGG 57 NA Drosophila melanogaster 61 dlg1 FBgn0001624 FBtr0073491,FBtr0112813,FBtr0302114,FBtr0073490,FBtr0301288,FBtr0073483,FBtr0073492 3 7 15 109 X 11275916 11275936 TATTGGATGACTCGAAGAGCA 59 11276007 11281816 CATGCGCTGATTATCAGCT 58 NA Drosophila melanogaster 61 Ptp10D FBgn0004370 FBtr0273235 3 1 4 106 X 11567397 11567417 GTATATCTGCATCCACCAGTG 58 11567485 11569372 CCTCGTCATCTTCATAGCC 57 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 1 2 2 92 X 11888947 11889034 ACCTATAAGATTGGAGCACTGG 59 11888876 11888894 TTGTCCACTATCCGTGCAG 59 NA Drosophila melanogaster 61 Ten-a FBgn0259240 FBtr0300203,FBtr0299859,FBtr0299858,FBtr0300202,FBtr0300204,FBtr0299860 1 6 7 80 X 12168210 12168229 GATTCCCGTTGCGTAATTCC 59 12168266 12170561 GTTTATCTATGTGAAACCTGGATGG 60 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073663,FBtr0273245,FBtr0073662 2 3 3 137 X 12466654 12466817 CAAACGCCAGAATGGACTG 59 12466535 12466554 TTCTTCACCTTGACCTCCTC 59 NA Drosophila melanogaster 61 LIMK1 FBgn0041203 FBtr0301830,FBtr0073659 3 2 5 87 X 12483191 12483885 CCGCATTACAGAAATTGATGTG 58 12483125 12483144 CGAATCACTAACTGGTGTGC 59 NA Drosophila melanogaster 61 tomosyn FBgn0030412 FBtr0300375,FBtr0073678 2 2 6 89 X 12534793 12534811 ATCCTTACTCGCGAACACC 59 12534863 12537915 TGTCGTTCAGCTGATCTGAG 59 NA Drosophila melanogaster 61 Smr FBgn0024308 FBtr0073707,FBtr0073706,FBtr0073708 3 3 3 83 X 12604739 12604838 GATGTTAGTGAATCCAAGAGGA 57 12604677 12604696 GCTATTGGTCATAGCTGACG 58 NA Drosophila melanogaster 61 CG15725 FBgn0030417 FBtr0073685 1 1 1 98 X 12600719 12600737 TATCTTTGCCGTACTGCTG 57 12600934 12600952 AAATAGCCCTCCGTTTGAG 57 NA DesignNoJunction Drosophila melanogaster 61 sno FBgn0005410 FBtr0073736,FBtr0112848,FBtr0073735,FBtr0112849 1 4 4 68 X 13100773 13100791 CTCCGATTTCGACGATGAC 58 13098162 13098180 GTGTTCAAATCGCGACCTC 59 NA DesignNoJunction Drosophila melanogaster 61 HDAC4 FBgn0041210 FBtr0301299,FBtr0301298 1 2 3 80 X 13170569 13176206 AATACACGATCTGCCATCAG 57 13170508 13170528 TTGAAGTCCAATGTCAGAGTG 58 NA Drosophila melanogaster 61 CG1640 FBgn0030478 FBtr0073771,FBtr0073770,FBtr0073774,FBtr0073772,FBtr0073773,FBtr0073769 3 6 6 83 X 13268114 13268132 ATTCAACCGTTAGACGTCC 57 13268315 13268334 TATGTTATCCAGTGTGAGCG 57 NA DesignNoJunction Drosophila melanogaster 61 up FBgn0004169 FBtr0301923,FBtr0301922 2 2 10 104 X 13493482 13494112 AAGAGTACACCTCCGAGGA 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 up FBgn0004169 FBtr0073851,FBtr0301920,FBtr0100563,FBtr0073852,FBtr0301921 3 5 10 83 X 13493487 13494115 ATGAAGAGTACACCAGCTCC 59 13490756 13490774 TGATGAACTCTGGATCGCC 59 NA Drosophila melanogaster 61 CG32628 FBgn0052628 FBtr0113442,FBtr0300984 3 2 2 80 X 13608755 13608862 TCAGATTACTCAAGCGACGA 59 13608904 13608923 CAGATCGGATGTCGTTATCG 58 NA Drosophila melanogaster 61 rdgB FBgn0003218 FBtr0301534,FBtr0100195,FBtr0301533,FBtr0073822,FBtr0301532,FBtr0100194,FBtr0073823 2 7 8 103 X 13664168 13665171 ATCTCCAGGTGGCTAACTG 58 13665311 13665329 CGAGTTCGTCTCATTGGTG 58 NA Drosophila melanogaster 61 inaE FBgn0261244 FBtr0290302 3 1 4 85 X 13700623 13700642 TTCGATGAGGTGCTCATCTC 59 13700687 13703324 GTTGTTACAACCTTCTTGAGGG 59 NA Drosophila melanogaster 61 CG42271 FBgn0259166 FBtr0299615,FBtr0299614 3 2 2 127 X 14127233 14127252 TACCTCAAGGATAAGGACCC 58 14127061 14127146 CTGTCCTTGAAGTCTAAATCGA 58 NA Drosophila melanogaster 61 NetB FBgn0015774 FBtr0302017,FBtr0073940,FBtr0302018,FBtr0302016 3 4 4 115 X 14642085 14642672 TTCGAGCCAATGGTCAGAG 59 14641988 14642006 AAGTAGCAGGGATCGTTGG 59 NA InUTR Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 1 2 4 134 X 14726860 14726880 CATTCGAAGTTCGAAATCCGA 59 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300433,FBtr0073947 2 2 4 99 X 14726895 14726913 AAATCCAGAGACAACAGCC 57 14726976 14727192 GTTATTCCGCTGCTGTCTG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950 2 2 8 121 X 14818434 14820804 CAAGATCATGAAGGCCGAC 58 14820886 14820907 CCAATATGGCTCTCAAATGTCC 59 NA Drosophila melanogaster 61 CG6340 FBgn0030648 FBtr0074038,FBtr0074040,FBtr0074039 1 3 3 151 X 15376558 15377237 CTTTCAGATACGGGCACCA 59 15377352 15377370 CTCTTTCTCGTTCCTTGCC 58 NA DesignRelaxed Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 1 5 5 83 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179125 TCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074265,FBtr0074261,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0074263,FBtr0301300 1 9 9 80 X 16270053 16270134 AGAGAACGAGGTGAAATGGA 58 16270177 16270195 GTGGGTAAGTCCTGGTACG 59 NA Drosophila melanogaster 61 Fur2 FBgn0004598 FBtr0301301,FBtr0074267,FBtr0074266,FBtr0074262,FBtr0074264,FBtr0301300 2 6 9 187 X 16270360 16270691 AACAGTGGTATCTGAATGGC 58 16270898 16270919 CGAATCGTTGCCATTTATATCG 58 NA Drosophila melanogaster 61 Traf-like FBgn0030748 FBtr0074275 3 1 3 101 X 16309608 16309697 AGACATTCACGGAACACCT 59 16309762 16309780 TCAGATGGGATCGCATACG 59 NA Drosophila melanogaster 61 CG4678 FBgn0030778 FBtr0300035,FBtr0300033 2 2 4 85 X 16602744 16602762 TATCCGTACGACAATACGC 57 16603312 16603422 GAGTAGGTCTGGAACATCG 57 NA Drosophila melanogaster 61 GS FBgn0030882 FBtr0300973,FBtr0300972 3 2 6 80 X 17785900 17785922 CAAGTCGAGATCAATACGATAGC 59 17785958 17791233 GCTGAGTACGAATCTTTGTATGG 59 NA Nonspecific Drosophila melanogaster 61 Sh FBgn0003380 FBtr0089657,FBtr0089661 1 2 8 80 X 17835183 17836827 CCAGGTACATTAGGTCAACAC 58 17835123 17835141 GACACCATCGTCCAAATCC 58 NA Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074573,FBtr0074575,FBtr0074574,FBtr0074571,FBtr0074570 1 5 6 84 X 18286925 18301831 AGAGTGTTTGTGAACAGATCG 58 18286787 18286879 ACTTGTACTCTGCCAAGGT 58 NA Drosophila melanogaster 61 tgy FBgn0030984 FBtr0290275 2 1 2 87 X 19020852 19020870 GACCAAAGAGGCCTTTGTC 58 19020487 19020801 AAAGAGGTAGGTGTCGTCG 59 NA Drosophila melanogaster 61 RhoGAP18B FBgn0261461 FBtr0299625,FBtr0299622 2 2 4 97 X 19040170 19058196 GAACGGCTTGAGGATTGTG 59 19040091 19040109 GGAGAATCGTTGACTGCTG 58 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 2 3 4 85 X 19234588 19234611 CTATTATCGCTTACAGTCTTCCTC 58 19228548 19234544 AAATAAGTTCCGAGCAGCG 58 NA Drosophila melanogaster 61 Tim9b FBgn0027358 FBtr0074766,FBtr0074767 2 2 2 60 X 19512468 19512486 CTAGCTAAACGCAACTTGC 57 19512367 19512444 AAAGTCTTTGAGGTTGCGC 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 CG18809 FBgn0042132 FBtr0074810 1 1 2 82 X 19636928 19637485 CGCAAACAATTTCGATTTGC 57 19636865 19636883 GATCCCGCTGATAGTAGGG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 CG1702 FBgn0031117 FBtr0300210 2 1 2 81 X 20338727 20338746 CAGTTTACTGGGACTCAGCA 59 20338790 20339584 TCTGGAGGGAACTCTACGT 59 NA Drosophila melanogaster 61 shakB FBgn0085387 FBtr0112571 2 1 5 131 X 20655399 20655417 CTCTTCCTGAAGAAGCAGG 57 20647267 20655307 TAAGATTGCCTGAAAGAAGAGG 58 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 2 5 5 80 X 21228146 21228164 GGAGAGCTACAATGTGGTG 57 21228206 21228295 ATGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077204,FBtr0077206 1 2 8 83 X 21247619 21247637 ACTGGAGAGCTAATACGCG 59 21247682 21251008 TTTCATCAGCGTCATGTTGTG 59 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 3 2 4 142 X 21296198 21296519 CCTATATGAAATGGAGCGTCCT 59 21295932 21295951 CGCGGTCCTTATAGAGTCTG 59 NA Drosophila melanogaster 61 CG14619 FBgn0031187 FBtr0077348,FBtr0077346,FBtr0077347 3 3 5 95 X 21860083 21864240 ACAGCCGATACGGATTACC 59 21864299 21864317 GTAGACCGTAGTCCTCCCT 59 NA Drosophila melanogaster 61 tRNA:CR31971 FBgn0051971 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:E4:56Fa FBgn0011848 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30208 FBgn0050208 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR30200 FBgn0050200 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A1322 FBgn0015543 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Or-CD11b FBgn0086071 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:S:AGY FBgn0013705 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 3 1 1 93 XHet 63654 63673 CAGAAGCTTAGAGAAGTGGC 58 63729 64080 AATCCTTTGATGGTGCAGC 58 NA DesignNoJunction Drosophila melanogaster 61 tRNA:S4:12Ea FBgn0011975 FBtr0073858 1 1 1 60 X 13909091 13909109 AGTGGTTAAGGCGTCTGAC 59 13909133 13909151 GTAGGATTCGAACCTACGC 57 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34334 FBgn0085363 FBtr0112536 3 1 1 60 X 22276468 22276486 TAAGGGATTGACGCGTCAG 59 22276508 22276528 GCCGAAGTGACCAAATATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 bbx FBgn0024251 FBtr0100599,FBtr0100598 1 2 2 80 X 21241688 21241710 CTCATATTCTGCAAGAGACATCG 59 21241747 21241838 AAGTATCTTTGTAATGGCACGG 59 NA Nonspecific Drosophila melanogaster 61 CG33713 FBgn0064116 FBtr0077227,FBtr0091702 2 2 2 60 X 21189740 21189758 AGCAGTCAAACAGCATTGG 59 21189698 21189716 GCCTGCTTGTAGTATCCGT 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1801 FBgn0031171 FBtr0300938 2 1 1 80 X 21179298 21179319 GCCATGGATTCTATCTAGAGGT 59 21179166 21179259 CATCCTTACGCAAATTCTCCT 58 NA Drosophila melanogaster 61 CG14581 FBgn0040645 FBtr0077186 1 1 1 60 X 21126386 21126404 CAAGTTTGCACCCATCCAG 59 21126427 21126446 CAGATCGATCAGGAGTTCCA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1695 FBgn0031116 FBtr0077308 1 1 1 110 X 20312304 20312433 CATCATGCCAGATTTGGCC 59 20312505 20312525 TAAACGAGTCGATAGAGCTCC 59 NA Drosophila melanogaster 61 l(1)G0156 FBgn0027291 FBtr0074780,FBtr0074781 3 2 2 80 X 19413855 19413945 GAACATTATGCGCATGTCC 57 19413793 19413811 TCGAACTGGATTTCTGGGA 58 NA Drosophila melanogaster 61 Pfrx FBgn0027621 FBtr0074717,FBtr0074716 3 2 8 126 X 19392857 19392875 TGATCAGCTCGGTAACCAC 59 19400566 19400585 TCTGATGATGCTCCTTTCAC 57 NA DesignNoJunction Drosophila melanogaster 61 vav FBgn0040068 FBtr0074677,FBtr0113316,FBtr0074678 2 3 3 87 X 19165020 19165111 CGCTTAGCCTAAAGACCGA 59 19165160 19165180 GATAAGCAGTACAGCATGGAG 58 NA Drosophila melanogaster 61 CG7884 FBgn0031001 FBtr0074674 3 1 1 106 X 19115089 19126308 TCTGTCAGTAATGGCTCTCC 58 19126377 19126395 CCGATCTTACCGAGACCTG 59 NA Drosophila melanogaster 61 CG7884 FBgn0031001 FBtr0074674 2 1 1 105 X 19115090 19126309 CTGTCAGTAATGGCTCTCCA 59 19126377 19126395 CCGATCTTACCGAGACCTG 59 NA Drosophila melanogaster 61 Mur18B FBgn0030999 FBtr0074672 2 1 1 129 X 19107404 19107422 AAGCTATCCACAGTCCTGC 59 19107585 19107603 CATCATCGCTCCATAGCTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG33253 FBgn0030992 FBtr0074668 1 1 1 123 X 19080126 19080144 CACCAGGAATCTGTCCGAG 59 19080231 19080320 TACGTCCTTGATCTCCACG 58 NA Drosophila melanogaster 61 CG34422 FBgn0085451 FBtr0112722 2 1 2 194 X 18739841 18743916 CTTCCACATCGAGCATTGC 59 18744073 18744092 TCTCCACGCTAATCTTCTCC 59 NA Drosophila melanogaster 61 CG15047 FBgn0030938 FBtr0074596 2 1 1 72 X 18422865 18422883 ATGGTGAAGGTGGTCATGG 59 18422919 18422937 TGTTGTTACTCTGGGCCAG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0300205 3 1 9 168 X 18266325 18266343 AACCCACAAAGTACAACGG 58 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 mnb FBgn0259168 FBtr0300510,FBtr0300509,FBtr0300508,FBtr0299619 2 4 4 82 X 17764201 17764296 ACTACATCGTTAAGCTCAAGC 58 17764139 17764159 GTACAGGTTGTATGAGAGCAG 58 NA Drosophila melanogaster 61 CG6769 FBgn0030878 FBtr0074493 2 1 1 81 X 17756220 17756314 GTTATCCGGACAATAATGAGGG 58 17756356 17756374 ACCAGCTGATACTCATCGC 59 NA Drosophila melanogaster 61 CG8173 FBgn0030864 FBtr0074475 2 1 1 94 X 17602674 17603226 CGATATCCTGCGCAAACTG 59 17602598 17602617 ACATTTCAAGTGCCAGTGTG 59 NA Drosophila melanogaster 61 CG8557 FBgn0030842 FBtr0074434,FBtr0074435,FBtr0300436 3 3 3 197 X 17357796 17357814 GACCTTATGATGACGCCTG 58 17356148 17357638 CTTGTAATCATTGACTAGTCGC 57 NA DesignRelaxed Drosophila melanogaster 61 CG8945 FBgn0030815 FBtr0074411 2 1 1 80 X 16978002 16978122 AGTCTCAGAGGTCTTACGGA 59 16977941 16977962 TATGCCCTCGTAGTTTAGAGTG 59 NA Drosophila melanogaster 61 CG9099 FBgn0030802 FBtr0074347 3 1 1 102 X 16780256 16780363 GATGCCCATTGAGTACTGC 58 16780172 16780192 CTCCTCAATCTTTAGTCGCTC 58 NA Drosophila melanogaster 61 CG9099 FBgn0030802 FBtr0074347 1 1 1 100 X 16780256 16780363 GATGCCCATTGAGTACTGC 58 16780174 16780193 CCTCAATCTTTAGTCGCTCG 58 NA Drosophila melanogaster 61 SmG FBgn0030765 FBtr0112993,FBtr0074377 1 2 2 92 X 16534257 16534340 AAATACATGGACAAGCGCA 58 16534183 16534201 GACCACGTTCATGAAGGGA 59 NA DesignNoJunction Drosophila melanogaster 61 sl FBgn0003416 FBtr0074230 1 1 1 118 X 16246751 16246834 GGAAACTTGAAGGTGGCAG 59 16246915 16246934 CGAAAGGCTATAGTCTCCCA 58 NA Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 2 2 2 60 X 15991602 15991751 CTGTCGATGATCAATGTGCT 58 15991561 15991579 GCGACAGGTAAACTCTGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG8578 FBgn0030699 FBtr0074104 1 1 1 83 X 15740369 15740450 AGGGTTCTTTAGACGTTAGAC 57 15740495 15740513 GTTGTTCGTGAAGCTTCTG 57 NA Drosophila melanogaster 61 Actr13E FBgn0011741 FBtr0074203 3 1 1 60 X 15630465 15630485 GCTAATCTCTTATCGCCACCT 59 15630425 15630449 CTTGATCTGGTTAACTACATGACTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8128 FBgn0030668 FBtr0074053 2 1 1 81 X 15592707 15592797 AGAGCATACTCGTCCTCCA 59 15592842 15592860 CTGTTACTCCGGCAAATCG 59 NA Drosophila melanogaster 61 CG42300 FBgn0259196 FBtr0299680 1 1 1 80 X 15449880 15449965 AAATGGCAGAAGTCGTGTC 58 15449818 15449836 ACTTCTCGATGGTGTTGCT 59 NA Nonspecific Drosophila melanogaster 61 Gmap FBgn0027287 FBtr0074042,FBtr0074043 1 2 2 88 X 15401618 15403760 GTGATGAAGTGGAGAGCCT 59 15403812 15403830 GTCAATCTTGTCCGTCTGG 58 NA Drosophila melanogaster 61 Top1 FBgn0004924 FBtr0100294,FBtr0074006,FBtr0074005 1 3 3 83 X 15219545 15219626 AGTCCGAGTATCATTCGAGAG 58 15219665 15219689 CTTGTAGTTCTAGTTTCTTCAGCTG 59 NA Drosophila melanogaster 61 CG9517 FBgn0030591 FBtr0073982 2 1 2 132 X 14771780 14771799 GAAAGAGAACAACAGTCGGC 59 14771335 14771582 TACTGACGACGTATGACGG 59 NA Drosophila melanogaster 61 CG32599 FBgn0260482 FBtr0073904 1 1 1 183 X 14139326 14139663 TTTCTGGTGCTCTTCCTGG 59 14139875 14139893 TCTTTAGCGTCACCTCCTC 58 NA DesignNoJunction Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 3 2 2 142 X 14088451 14088545 GAGGATGCTTAAATCTATGTGAGC 59 14088646 14088664 CTTGGAGTGACAGAGGTCG 59 NA Drosophila melanogaster 61 CG10993 FBgn0030524 FBtr0073837 3 1 1 205 X 13684732 13684809 AAGCTGTCAAGAAAGCCTC 58 13684545 13684563 ACGATGTTCATGAGTTCGT 57 NA DesignRelaxed Drosophila melanogaster 61 CG32625 FBgn0052625 FBtr0073839 2 1 1 99 X 13650529 13650618 ATGAACATATCATCAAGTGCCC 59 13650451 13650469 TTGGCATCACTTTCCTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 Ndc80 FBgn0030500 FBtr0073850 1 1 1 193 X 13505498 13505520 GGACTTATTGCGGATCTATTCAG 59 13505259 13505346 AGCCATGATTTGTTCACCTG 58 NA Drosophila melanogaster 61 Yippee FBgn0026749 FBtr0073789,FBtr0100168 3 2 2 60 X 13280857 13280877 TGATCAGTACCCGATTCACAG 59 13280751 13280770 TTGACCACACGCTTAAACAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG1764 FBgn0030467 FBtr0073796 1 1 1 106 X 13190038 13190557 GATTGTGGCCAGAATCTCG 58 13189950 13189968 GACCAATGGTCCTCAGGAG 59 NA Nonspecific Drosophila melanogaster 61 CG15743 FBgn0030465 FBtr0073755 1 1 1 88 X 13180833 13180851 ACAGATACCGGATGTGACC 58 13180903 13180997 ATAGCTCCTCGGTGAACTC 58 NA Drosophila melanogaster 61 CG12714 FBgn0040862 FBtr0073744 1 1 1 207 X 13005846 13005865 CTTTACAGCTTTGAATCGCA 57 13005438 13005677 TTTCTTCATCGGCTTCTTGG 58 NA DesignRelaxed Drosophila melanogaster 61 CG4661 FBgn0030429 FBtr0073699 2 1 1 60 X 12750048 12750069 CATTTCTGTGAACTAATGGCTC 57 12750009 12750027 TGATCCCTAGCATTAGGCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15927 FBgn0030389 FBtr0073647 3 1 1 60 X 12349034 12349052 CCATTGAATATCCTGCGCC 59 12349076 12349094 TCTGACCAATGTAACGCGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG1924 FBgn0030377 FBtr0073634 3 1 1 60 X 12071643 12071662 ACGAAACCTGAAGATTGGGA 59 12071602 12071620 TGTCTACCATTGGAGCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34323 FBgn0085352 FBtr0112525 2 1 1 81 X 11964625 11964648 CGACTATATGTCGAGATATCATGC 59 11964685 11964761 GCCATTATTGGTTTCCATCTCC 59 NA Drosophila melanogaster 61 Cyp311a1 FBgn0030367 FBtr0073640,FBtr0073639 3 2 2 83 X 11924783 11924879 GATTGTGGACACCTCAATGG 59 11924719 11924737 CTGCTCAAATGGAATGCCT 58 NA Drosophila melanogaster 61 CG1806 FBgn0030360 FBtr0073574 3 1 1 81 X 11903136 11903157 CTTGCCGTTTGGATACTAATCC 59 11903199 11903283 CCAATAGCAGCGACAATCC 59 NA Drosophila melanogaster 61 fw FBgn0001083 FBtr0112806,FBtr0073580 3 2 2 95 X 11888948 11889037 CAAACCTATAAGATTGGAGCACTG 59 11888876 11888894 TTGTCCACTATCCGTGCAG 59 NA Drosophila melanogaster 61 CG15221 FBgn0030331 FBtr0112979 3 1 1 114 X 11618464 11628227 CGAGTTCGCAAACATGGAG 59 11628305 11628323 CAACTTGTAGTGGAAGCGG 58 NA Drosophila melanogaster 61 CG2371 FBgn0030323 FBtr0073532 3 1 3 123 X 11572294 11572444 CACGGAAAGATGAGTCCCA 59 11572189 11572207 GTTCGGTGTTACTTGTGGG 58 NA InUTR Drosophila melanogaster 61 CG1749 FBgn0030305 FBtr0073505 1 1 1 123 X 11377876 11377894 ATCGTCAAGGACTACGAGC 59 11378090 11378110 AGTCGAAGAGTATCAGTTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG11750 FBgn0030294 FBtr0073456 2 1 1 144 X 11253459 11253478 ATATTCCGGAACTGCAATGG 58 11253651 11253669 TCGCTGAAATCAAAGTCGT 57 NA DesignNoJunction Drosophila melanogaster 61 Rpt3 FBgn0028686 FBtr0073436 1 1 1 115 X 11019359 11019377 TGGACGTACTGATACCGGA 59 11019529 11019606 TTGCAGTTTCTTGTAACGCA 59 NA Nonspecific Drosophila melanogaster 61 CG11203 FBgn0030249 FBtr0073385,FBtr0112978 1 2 2 87 X 10806371 10806552 ACATACACAGTCCCAAATACCA 59 10806600 10806618 AGACTGCTGTCCTTGTAGC 59 NA Drosophila melanogaster 61 CG32683 FBgn0052683 FBtr0071463 1 1 1 102 X 10307860 10314877 TCCGTAAAGTACGGGTCTG 58 10307776 10307794 GGCGGTGTTACATTATCCG 58 NA Drosophila melanogaster 61 CG2909 FBgn0030189 FBtr0071441 1 1 1 60 X 10222047 10222065 TGCTGGTAGTCTCTTACGC 59 10222086 10222446 TTCATCCAGAATTCATTACCCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1986 FBgn0030162 FBtr0071395 1 1 1 81 X 9804663 9804808 GAGTGTCGCACCATATCAG 58 9804600 9804618 GACGAAATCCTCGAAGGTC 58 NA Drosophila melanogaster 61 CG15249 FBgn0030161 FBtr0112967,FBtr0112966 3 2 2 94 X 9783065 9783083 CGCATATACGACACAAGCG 59 9782925 9783012 GCGTGTATCTGTATATTGATCCAC 59 NA Drosophila melanogaster 61 CG9686 FBgn0030158 FBtr0071389 2 1 1 63 X 9774064 9774082 GAGGACAAGATACCCGGAC 59 9774109 9774127 TACTGCTGCCCGTAATCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Aats-lys FBgn0027084 FBtr0071367,FBtr0071366 1 2 2 113 X 9501745 9501763 CTGCATTTCGGGTTGAAGG 59 9501589 9501669 GTACGAGATGATCTTGGCAC 58 NA Drosophila melanogaster 61 CG42611 FBgn0261260 FBtr0302154 1 1 2 207 X 9366211 9366229 ATTCACAGCATCACAGCAG 58 9319487 9366042 GTGTATTTACCTGGTGATCCA 57 NA DesignRelaxed Drosophila melanogaster 61 CG12118 FBgn0030101 FBtr0071339 1 1 2 80 X 9090160 9090237 CCATCCAAGATTCTACGCA 57 9090098 9090116 CAGATGGTACCCAATACGC 58 NA InUTR Drosophila melanogaster 61 CG12075 FBgn0030065 FBtr0071253,FBtr0071254 3 2 2 132 X 8762244 8763251 GAGCTGGAGACCAGATTGG 59 8763347 8763365 GCAGTTGGTGATGATGGTG 59 NA Drosophila melanogaster 61 Caf1-180 FBgn0030054 FBtr0071228 3 1 1 83 X 8497906 8497990 AGTGATAGATTACCTTTCACCG 57 8497844 8497863 AGATACTTGGCCTTCATTCG 57 NA Drosophila melanogaster 61 CG12111 FBgn0030050 FBtr0071232 3 1 1 86 X 8464764 8464851 CTATAATGGCATTCCATCGGAG 58 8464699 8464717 ACCTTATTCATGGGCTCGA 58 NA Drosophila melanogaster 61 CG12125 FBgn0030037 FBtr0071246,FBtr0300383 3 2 2 110 X 8328974 8329058 AAGAGACGGCATTAACAACAG 59 8328884 8328904 ATATCTGCTCGGATATCACGT 58 NA Drosophila melanogaster 61 CG10555 FBgn0030034 FBtr0071174 3 1 1 122 X 8294598 8294616 ATCCCGTCTATCGGAATGC 59 8294702 8294996 TAGGACGCTGTTGATTGGG 59 NA DesignRelaxed Drosophila melanogaster 61 CG2256 FBgn0029995 FBtr0301736 3 1 1 186 X 7979068 7979086 AAACGGTATCCGTGTTCCT 59 7978820 7978918 AGCTCGTCCTTCGTAAACC 59 NA Drosophila melanogaster 61 CG15333 FBgn0029989 FBtr0071124 3 1 1 60 X 7914763 7914781 AAAGGACAAGAGCTTCGTG 58 7914721 7914742 GTGGTATTGGCAAATTGAAGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Rab39 FBgn0029959 FBtr0071072 1 1 1 145 X 7629358 7629804 AATTCGCCGAGTTATCCGA 59 7629913 7629931 CCGGTAGTAGGACTTGGTG 59 NA Drosophila melanogaster 61 CG11369 FBgn0029951 FBtr0071067 3 1 1 60 X 7469071 7469089 GAAGAAGAGTTCCACCACC 57 7469111 7469131 ACCATTTAGACTACGACGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 fz4 FBgn0027342 FBtr0071018,FBtr0071017 1 2 2 72 X 7002378 7002396 CAAACGTCAGCAGTGATCG 59 7002262 7002280 GATTGCCTACGAAACAGGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3032 FBgn0029928 FBtr0071032 3 1 1 60 X 6907504 6907527 CCAATCAGATGAGATTCCAATCAG 59 6907467 6907488 CGATAGATTTATGTTGAGCAGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33666 FBgn0053666 FBtr0302415 1 1 1 80 X 6370846 6370925 GATTCTTGACTACTCCGAAGC 58 6370786 6370805 TTCTTAGAACGGGAAAGCCA 59 NA Nonspecific, InUTR Drosophila melanogaster 61 wuho FBgn0029857 FBtr0070897 3 1 1 60 X 6183303 6183321 ATGGTGCTAGACGGATTGG 59 6183345 6183363 AGTCCTCGGGAATGAATGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3774 FBgn0029849 FBtr0070874 1 1 2 86 X 6114441 6115423 CATTGCGAAGATATGGCTCTG 59 6115471 6115489 CAGAAAGACCACGTTGCTG 59 NA InUTR Drosophila melanogaster 61 CG4020 FBgn0029821 FBtr0070824 3 1 1 107 X 5801543 5801633 CAACGAAGTCTCCAACTTTGG 59 5801702 5801720 GGACTCTCCTTCAGGAGGA 59 NA Drosophila melanogaster 61 CG16721 FBgn0029820 FBtr0070821 1 1 1 92 X 5775271 5775289 GAATTTGCGCAACATGGAG 58 5775345 5775427 CCCTCCAAACTATCCGAGG 59 NA Drosophila melanogaster 61 CG42264 FBgn0259149 FBtr0299596 2 1 1 153 X 5668164 5668182 GGGTTCAACGATGAACTGG 58 5667965 5668047 ATTGGAGACCCTGATGACC 58 NA Drosophila melanogaster 61 CG42264 FBgn0259149 FBtr0299596 1 1 1 152 X 5668163 5668181 GGTTCAACGATGAACTGGC 59 5667965 5668047 ATTGGAGACCCTGATGACC 58 NA Drosophila melanogaster 61 CG4078 FBgn0029798 FBtr0070807 3 1 1 81 X 5644425 5644506 GAAGCGAATATGAAACTACCG 57 5644548 5644567 CTAGTGGTTCATCCTCTGTC 57 NA Drosophila melanogaster 61 CG33080 FBgn0053080 FBtr0070845,FBtr0070844 2 2 2 122 X 5604994 5605517 TATTTCTGATCGGCTATGCCT 59 5604892 5604910 CCTTGTCCTCGTGACTCAG 59 NA Drosophila melanogaster 61 Tre1 FBgn0046687 FBtr0070848 1 1 1 93 X 5569069 5569158 GATTCTTCCAGGAGAGCTG 57 5568994 5569012 ATGCTGAGGAGTGAAACAG 57 NA Drosophila melanogaster 61 CG4068 FBgn0029738 FBtr0112950 2 1 5 105 X 4826656 4826676 GTTGTTCTCCTCAACTAACCT 57 4825758 4826592 CAAAGGACAACTCAGATAAACC 57 NA InUTR Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0070731,FBtr0302037 3 2 2 85 X 4697465 4697485 CCATAGAGGGAAATCAAGGAC 57 4697326 4697347 GAGTGGATTGAATGAATTAGCC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG2861 FBgn0029728 FBtr0070731 3 1 2 82 X 4692534 4692611 AACCACAGAATACATCGACG 58 4692471 4692489 CTGAAAGTTTGGCTCCTGG 58 NA Drosophila melanogaster 61 CG15572 FBgn0029702 FBtr0070647 3 1 1 60 X 4163772 4163794 GAGGATAAGAAGGATAACGAGGA 59 4163814 4163832 TCAACATGGAAGAAGACGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10803 FBgn0029666 FBtr0070569 3 1 1 105 X 3381472 3381493 GCATAGCGTCTACGAAATATCC 59 3381558 3381643 ACCAGAAAGGTATTTGCCCA 59 NA Drosophila melanogaster 61 CG2658 FBgn0024992 FBtr0070502 2 1 2 120 X 2590286 2590366 TATCCTAGACAAGGCGCTG 59 2590184 2590202 CTCCAGTTTCACCGATGAC 58 NA Drosophila melanogaster 61 ptr FBgn0003159 FBtr0070404,FBtr0070403,FBtr0070402 2 3 3 80 X 2243027 2243045 TAAGCTCTTGTCCCTCGTC 58 2242898 2242983 TGACTAGCATCCACTGGAC 58 NA Drosophila melanogaster 61 Vinc FBgn0004397 FBtr0070420 3 1 1 119 X 2112122 2114417 GTTGCCCAACAGGTATCTC 58 2112021 2112040 CTTCACGAGATTAGCCACTG 58 NA Drosophila melanogaster 61 sta FBgn0003517 FBtr0070291,FBtr0070289,FBtr0070290 1 3 3 93 X 1376770 1376788 TCAACATCCTCAACCTGGG 59 1376503 1376713 ATGACGAAGATGTCCGAGG 59 NA Drosophila melanogaster 61 CG13365 FBgn0029529 FBtr0070160 3 1 1 110 X 514992 515010 GACTGGGCCAAGTACTACG 59 514900 514918 GAACCTGATGATCTTGCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 G9a FBgn0040372 FBtr0070063 1 1 1 80 X 146766 146786 CATCAGGACTACAGATTCCCT 58 146823 147111 GTAGTCAAAGCATATTTCCTCTCC 59 NA Drosophila melanogaster 61 onecut FBgn0028996 FBtr0089104 2 1 1 91 4 624871 625639 AATAGCGGAACGAATTGGC 59 624798 624816 ATGTGAAACCTCGCTTCCA 59 NA Drosophila melanogaster 61 pan FBgn0085432 FBtr0089157,FBtr0089160,FBtr0089161,FBtr0089162,FBtr0089158,FBtr0112657,FBtr0089159,FBtr0089156 2 8 10 80 4 115559 115581 CGAGATAACTATGGTTACGTGTC 58 115618 120042 CATATTATTGCCTCCCGAATCC 59 NA Drosophila melanogaster 61 CR42549 FBgn0260722 FBtr0301248,FBtr0301250,FBtr0301176,FBtr0301249 1 4 4 60 3R 5374916 5374937 TGTAATTGTCCTCTGTTCTCCT 58 5374877 5374898 AATTGATGGGTTAGAGATCGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11333 FBgn0039850 FBtr0085789 2 1 1 143 3R 27289195 27289270 ACTACTAAACTGCTGGCAG 57 27289375 27289395 CATAGAGAACATGGTCTTGGA 57 NA Drosophila melanogaster 61 gskt FBgn0046332 FBtr0085784 3 1 1 60 3R 27198864 27198884 TCTGCTCAAGGTACTATCGTG 59 27198905 27198924 TTGGTGGTATAGTCAGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 gskt FBgn0046332 FBtr0085784 2 1 1 60 3R 27198864 27198883 TCTGCTCAAGGTACTATCGT 58 27198905 27198924 TTGGTGGTATAGTCAGTGGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PH4alphaNE3 FBgn0051017 FBtr0085667 3 1 1 80 3R 26430062 26430139 ACTAAAGAGACTAGCCCAGG 58 26430181 26430200 AGAGGATTGCCCAAGTACTC 59 NA Drosophila melanogaster 61 CG15535 FBgn0039764 FBtr0085629 2 1 1 109 3R 26249334 26249355 CCAAATAAACCGGAAATTCGGA 59 26249246 26249264 TTATAGGCCTTCACCTGGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9733 FBgn0039759 FBtr0085638 1 1 1 81 3R 26071294 26071312 ATCGGCGATATGTCCTCAC 59 26070408 26071249 AGTCTCACCGACACAAGTG 59 NA Drosophila melanogaster 61 CG7896 FBgn0039728 FBtr0085545 1 1 1 85 3R 25812888 25812973 CGAATATGCTACAGCAATTGGA 59 25813019 25813037 GGTTATGGTGTTGCGACTG 59 NA Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 1 2 2 80 3R 25736582 25736670 GCAGTCAACAGAAACTCCT 57 25736714 25736732 TTCGGTCCTCTCACTAGTC 57 NA Drosophila melanogaster 61 CG9986 FBgn0039589 FBtr0085304 1 1 1 97 3R 24433344 24433362 CAGTGGTGCATCAGAAGAG 58 24433423 24433500 TGCAAGGTGCTTAACTCAG 58 NA Drosophila melanogaster 61 CG31051 FBgn0051051 FBtr0085296 3 1 1 82 3R 24346111 24346129 TAGCGAGGACAGACAATCC 58 24345976 24345994 ACATATGTTTGGGTGCTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG34437 FBgn0085466 FBtr0112738 3 1 1 99 3R 24109752 24109831 TTCGATCAAAGCGAAAGCA 58 24109894 24109912 GAGTGTAGACGCTTTGGAC 58 NA DesignNoJunction Drosophila melanogaster 61 Gr98c FBgn0046886 FBtr0085187 2 1 1 82 3R 23370971 23370989 TGGACTTACCATTCTGCAC 57 23371034 23371109 CCAAACGATTGAGTTGACAG 57 NA Drosophila melanogaster 61 CG12885 FBgn0039523 FBtr0085185 3 1 1 60 3R 23356799 23357017 ATGATGAAGCTGCAATACCA 57 23357039 23357058 ATCGCAATGTTTGATTCTGC 57 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG18766 FBgn0042111 FBtr0085122,FBtr0085123 2 2 2 85 3R 23069031 23069049 ATCCGAGTCACCAGTTTGG 59 23068902 23068985 CGTACTCGGTCTTATAGAACCC 59 NA Drosophila melanogaster 61 Mdh FBgn0029155 FBtr0085110,FBtr0301707,FBtr0301708 1 3 3 80 3R 22981782 22981868 GCCTACGATAGAGGCTTGG 59 22981909 22981930 GAAGTTGTACAGCTGATTCTCC 59 NA Drosophila melanogaster 61 CG14237 FBgn0039428 FBtr0085013 3 1 1 99 3R 22282019 22282556 AAATACGGAGTCGACCTCC 58 22282618 22282637 TATCGCTAGGATTCGGAGTG 58 NA Drosophila melanogaster 61 CG33970 FBgn0053970 FBtr0100013,FBtr0100012 3 2 2 108 3R 22186366 22186386 CTATACCGCATCTCTGATGGA 59 22186453 22186542 GATTTGTTGATTTGACCAGTCC 58 NA Drosophila melanogaster 61 CG17195 FBgn0039369 FBtr0084921 1 1 1 60 3R 21602725 21602746 ACATTGCTTACAAGCTCTACTG 58 21602686 21602705 TTACCAAGTATGTTGTGCGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG11913 FBgn0039331 FBtr0273265 2 1 1 70 3R 21184208 21184279 CATCAAACAAAGAAGATTGCCC 58 21184310 21184328 ATACAGCTCATCCCAGCTG 59 NA DesignRelaxed Drosophila melanogaster 61 CG31098 FBgn0051098 FBtr0084863 1 1 1 80 3R 21117675 21117757 TGGTCACATTGGACTTTCAG 58 21117614 21117632 CGTTCAAGGATCCGTAGAG 57 NA Drosophila melanogaster 61 Cad96Cb FBgn0039294 FBtr0302299,FBtr0301090 3 2 2 162 3R 21053857 21056365 GTTTAATAAAGCTACTCTGGGCG 59 21053717 21053735 ATTGATGTCGCCTGTTTCG 58 NA Drosophila melanogaster 61 CG11168 FBgn0039249 FBtr0084715 3 1 2 108 3R 20745296 20745654 GCCATAAACGAGTTCACCC 58 20745726 20745744 GTCGTTGCGAGTTCTTCTC 59 NA Drosophila melanogaster 61 ash2 FBgn0000139 FBtr0084659 1 1 3 95 3R 20477269 20477288 CTTCAGTTCCATTGTGACCG 59 20477346 20477594 TGGAGAGGGAAGACTCCTC 59 NA InUTR Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 1 1 1 113 3R 20355898 20355980 GAAATCTAATCCTAATGCGGCA 59 20355806 20355824 ATCCATCCACGCAGATCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG13615 FBgn0039199 FBtr0084617 3 1 1 80 3R 20217047 20217065 GAGGGTGATCAATGAGGCA 59 20217107 20217193 TGGTAATTAAACATGGTGGCC 59 NA Drosophila melanogaster 61 4EHP FBgn0053100 FBtr0084587 3 1 2 81 3R 19890044 19932557 CGAAATATCCGGAGGATAGC 57 19889982 19890000 AACGTATCACGGATACGTG 57 NA Drosophila melanogaster 61 CG6000 FBgn0039145 FBtr0084539 3 1 2 170 3R 19880168 19880330 GTAATATTGCCAGGCTCCT 57 19880464 19880482 AATTCCTGACTAACCACGC 57 NA InUTR Drosophila melanogaster 61 CG5991 FBgn0026576 FBtr0084537,FBtr0084536,FBtr0084538 3 3 3 60 3R 19878626 19878646 CGGAGATTACCATCGATTCCA 59 19878668 19878686 GAAGTGACGACGAATGGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10365 FBgn0039109 FBtr0084447,FBtr0084448,FBtr0084446,FBtr0084449 2 4 4 81 3R 19554870 19555665 TGTGAAGAGAAGCCTGGAC 59 19556385 19556404 CTGTTATTCTGTAGGCGCAG 58 NA Drosophila melanogaster 61 CG16723 FBgn0039092 FBtr0084484 1 1 1 80 3R 19421265 19421285 TTATCCTATCCTTGATGTGCG 57 19421145 19421225 GAATACTCCTGGGATCATCAC 57 NA Drosophila melanogaster 61 sec13 FBgn0024509 FBtr0084409 3 1 1 85 3R 19182598 19182616 AACATACTGGCATCGTGCT 59 19182660 19183128 TATTCGTAGAGCTTAGTCCAATCC 60 NA Drosophila melanogaster 61 CG5315 FBgn0038984 FBtr0084283,FBtr0084284,FBtr0084282 2 3 3 96 3R 18370540 18370560 TTCCAGCTATTCACTACAGCA 59 18370401 18370482 AGAATGTAGAGGAGGCCCA 59 NA Drosophila melanogaster 61 pinta FBgn0038966 FBtr0084297 1 1 1 115 3R 18249655 18249673 AGAGATCCGTGGAAAGCTG 59 18249501 18249580 GGGCGTCATGAATATTCTAAAGG 59 NA Drosophila melanogaster 61 CG7059 FBgn0038957 FBtr0084221,FBtr0084219,FBtr0084220 3 3 3 102 3R 18217014 18217094 CATTGAGTGAATTCGGCGT 58 18217156 18217178 CTGCTCAATACGGATGAATAGAC 59 NA Drosophila melanogaster 61 Gld2 FBgn0038934 FBtr0084200 2 1 1 83 3R 18040635 18040905 AGTCCAACATTACAATGCCAG 59 18040950 18040968 AGAATTCGCGCCAATAACG 59 NA Drosophila melanogaster 61 CG6332 FBgn0038921 FBtr0290270,FBtr0084170 3 2 2 61 3R 17840973 17840995 TACAGCTATCTATCGCTGTACAG 59 17841016 17841107 TTCTTCGGCTTAACCAACG 58 NA DesignNoJunction Drosophila melanogaster 61 Cby FBgn0067317 FBtr0290217 1 1 1 83 3R 17693874 17694045 CTTCAAGCAGTTGTTTGCA 57 17694092 17694110 ATATTGCAACGTCCCTGAC 57 NA InUTR Drosophila melanogaster 61 CG31198 FBgn0051198 FBtr0084128 2 1 1 81 3R 17581772 17581790 CCGTATGATCAAGCACACC 58 17581830 17581912 CGACTGATACTCGTATTTCTTCAG 59 NA Drosophila melanogaster 61 CG31176 FBgn0051176 FBtr0084114 3 1 1 87 3R 17544099 17544117 AAGTCCTCCCGAAATATGC 57 17499432 17544050 GAGTTATGTATCTTCTGGCCT 57 NA Drosophila melanogaster 61 InR FBgn0013984 FBtr0290232,FBtr0084121,FBtr0290230,FBtr0290231 3 4 4 86 3R 17404340 17404358 ATGAGAGCTGCATCTCCTG 59 17404213 17404292 GGCTGTCGAACTGATAATAGC 59 NA Drosophila melanogaster 61 C15 FBgn0004863 FBtr0084111 3 1 1 123 3R 17333022 17333040 ACTGAAGATGACCGATGCC 59 17337816 17337834 GAGGGACAGCATCAGTCTG 59 NA DesignNoJunction Drosophila melanogaster 61 rtet FBgn0028468 FBtr0084009 3 1 1 82 3R 16935846 16935866 CGTCACATTTCTGATGTACCA 58 16935909 16935985 TCATGATTACACCCGTTGTC 58 NA Drosophila melanogaster 61 Fancd2 FBgn0038827 FBtr0083995 2 1 1 80 3R 16640971 16640991 ATTGGACATCATAGCCAATGC 59 16640806 16640931 TAGTTGATGTTAAGCAGCTCG 58 NA Drosophila melanogaster 61 CG31205 FBgn0051205 FBtr0300451 2 1 1 91 3R 16557428 16557505 TTACATCCAACAATCCAAGCC 59 16557557 16557576 GGCTCCGCAATGATATTGTC 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487,FBtr0100457,FBtr0089484 1 5 5 80 3R 16366166 16366254 ATAATGTCAGAGATCCAGTCG 57 16366106 16366124 CGATGATTGACCGGATAGG 57 NA Drosophila melanogaster 61 Gr92a FBgn0045471 FBtr0083865 3 1 1 259 3R 15947543 15947563 CAAGCTATTTGTTCCTCTCCT 57 15947781 15947859 GAAGGAATAAAGTATCCAGCGT 58 NA DesignRelaxed Drosophila melanogaster 61 Gr92a FBgn0045471 FBtr0083865 1 1 1 203 3R 15947599 15947620 CCTTGATTGGCTTTAATGTAGC 58 15947781 15947859 GAAGGAATAAAGTATCCAGCGT 58 NA DesignRelaxed Drosophila melanogaster 61 CG4459 FBgn0038753 FBtr0083849 2 1 1 110 3R 15752697 15752771 CGAAACTGAACGGAATTCAC 57 15752606 15752624 ATCTCACTGGTACAGGTGG 58 NA Drosophila melanogaster 61 CG11659 FBgn0038731 FBtr0083797 2 1 1 60 3R 15602171 15602252 GCAGGCAACTATCATCTGAC 58 15602130 15602148 TCCAGTCAAGGGTGTTGTG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG7333 FBgn0038715 FBtr0114553 1 1 1 80 3R 15427578 15427658 GTGAAGTCAGTCATTATAACCCTC 59 15427697 15427715 GAGCTTAAAGGGCGAAGTG 58 NA Drosophila melanogaster 61 Dys FBgn0260003 FBtr0110918,FBtr0110917,FBtr0083766,FBtr0083764,FBtr0110916,FBtr0110919,FBtr0083765,FBtr0110915 2 8 8 86 3R 15416544 15416563 AGATCTCAACGAGATACGCT 58 15416612 15416695 CTAATCCTGTCGAGAGCCA 58 NA Drosophila melanogaster 61 CG14282 FBgn0038685 FBtr0083734 2 1 1 60 3R 15002852 15002870 AACGACAACGATGTGAAGC 59 15002889 15002912 CCTTTAGCTCTAGATTCAGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dnk FBgn0022338 FBtr0083707 3 1 1 197 3R 14807787 14807805 GAAGAGTCCATTCACGTGC 58 14807966 14808041 GAGGACTAGGACCTTGCAC 59 NA Drosophila melanogaster 61 CG18208 FBgn0038653 FBtr0083677 1 1 1 104 3R 14635159 14635180 CATGGTCTTTGTGTACATACGA 58 14633002 14635094 AAGCTCGTTACCTGTTCGT 59 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG10864 FBgn0038621 FBtr0083654 3 1 1 60 3R 14236561 14236579 TTCACCGTGATCTATGCCA 58 14236519 14236539 CCATGTTGAGGAAGTACAGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 tatl FBgn0260241 FBtr0299939 3 1 1 60 3R 14081522 14081602 AGTGTTTGCCAAAGAAGTACTC 59 14081623 14081641 AGGCCAAGAATAAGCAAGG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG14314 FBgn0038581 FBtr0083560 2 1 1 109 3R 14042507 14042525 GAACTGCTCAAGTTCCAGG 58 14042596 14042678 CGAAGATCCTCCATTATGAGC 58 NA Drosophila melanogaster 61 cdm FBgn0261532 FBtr0083619 3 1 1 175 3R 14006605 14006625 GAGGAGATCGATGTCCTAGAG 58 14006331 14006409 AAGAACATAACAATGGCCGT 58 NA Drosophila melanogaster 61 CG7397 FBgn0038543 FBtr0083531 3 1 1 80 3R 13599076 13599212 CTTCATGGACACGTTCTCG 58 13599014 13599033 GCATTCTTTGCCCTATTGCA 59 NA Drosophila melanogaster 61 Edg91 FBgn0004554 FBtr0083502 1 1 2 93 3R 13437189 13437207 TTATCGCAATGGCTCTGGT 59 13437051 13437069 CTACCTTCGGTCTTCACCG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5285 FBgn0038490 FBtr0083409 1 1 1 96 3R 12976602 12976624 CGACTATTTACGTCGCTATATGG 59 12976680 12976759 AAAGGGAATTCCGGTTTGG 58 NA Drosophila melanogaster 61 Fer2 FBgn0038402 FBtr0301709 3 1 1 80 3R 11975892 11976037 CATCCAGAGTAGCATCAATTCG 59 11975833 11975851 TTGCTCAGACGTTTCTCGT 59 NA Drosophila melanogaster 61 CG17631 FBgn0038392 FBtr0083219 3 1 1 134 3R 11849432 11849778 CGAATCAGACCTGGTCTGG 59 11849875 11849894 GATAGCCACAGCCATAGGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG14872 FBgn0038346 FBtr0083156 2 1 2 88 3R 11334993 11335011 AGCTCCCTGATCTATTGGG 58 11334274 11334941 TAACCGGAGAGTAGAGCTG 57 NA Drosophila melanogaster 61 CG6118 FBgn0038339 FBtr0113240,FBtr0113239 3 2 2 93 3R 11249455 11249476 ACAGGTGAATGTCAAGTATGAG 58 11249257 11249401 GTCCAGGTTCTTCTCTGTG 57 NA Drosophila melanogaster 61 CG31392 FBgn0051392 FBtr0083088 2 1 1 87 3R 11175076 11175094 TACTCTAGCGAACCTAGCC 58 11175142 11175431 CCATCATATTGAATACTTGCCC 57 NA Drosophila melanogaster 61 CG31344 FBgn0051344 FBtr0083136 3 1 1 97 3R 11050101 11050473 TATTCAGGCGTGGTCAGAG 59 11050022 11050041 AATGGATGGAATAGCCAGCA 59 NA Drosophila melanogaster 61 put FBgn0003169 FBtr0082977 3 1 1 81 3R 10447047 10447066 ACGAAGTTCAGGAGAGTGTG 59 10446925 10447003 ACATTAAGTCCCGGATGGG 59 NA Drosophila melanogaster 61 CG34388 FBgn0085417 FBtr0301081 1 1 2 84 3R 10246555 10246573 ACTTATTGTGGATGAGCCC 57 10246621 10246705 CTTGCTCATGTCTTCTCCA 57 NA Drosophila melanogaster 61 NK7.1 FBgn0024321 FBtr0082941,FBtr0082942 1 2 2 97 3R 10156792 10166951 AAACGCAGGTAAAGATCTGG 58 10156714 10156732 ATTCGAGGATTTGTGCTCC 57 NA Drosophila melanogaster 61 CG10841 FBgn0038163 FBtr0082795 1 1 1 85 3R 9459167 9459254 GATGAGATCGATACAGTATTCACC 58 9459298 9459316 TCCTGGATGTGACGAAGTG 59 NA Drosophila melanogaster 61 CG14370 FBgn0038158 FBtr0082788 3 1 1 60 3R 9413915 9413933 AAGCATCTGGACAATGGAC 57 9413956 9413975 CAATTCTTAGCGGAAAGCTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 yellow-e3 FBgn0038150 FBtr0082759 3 1 1 84 3R 9229776 9229794 TGAGATTAGGACGCTCCAG 58 9229645 9229728 TACAGAAAGCGGTCTTCCA 58 NA Drosophila melanogaster 61 CG15888 FBgn0038131 FBtr0100257 1 1 1 125 3R 9111205 9111707 CAAGAAGGCACCCAAATCC 59 9111098 9111116 TAGGTCTCCACACTTCCAC 58 NA Drosophila melanogaster 61 Vha55 FBgn0005671 FBtr0082670,FBtr0082671,FBtr0301661 2 3 3 175 3R 8450829 8450847 TAAGGACCACTCTGACGTG 58 8450611 8450690 GGTTCTCATAGTTGCCCTG 57 NA Drosophila melanogaster 61 hug FBgn0028374 FBtr0082639 2 1 1 180 3R 8353583 8353602 CGACTACAAAGAGCTGACAG 58 8353745 8354308 ATTACTCTGCAGCTGTCGT 59 NA Drosophila melanogaster 61 CG10035 FBgn0038028 FBtr0082606 3 1 1 115 3R 8208148 8208166 GAAGGAAACTCGGAAGCAG 58 8207982 8208000 CTCAGGTACTGCTGAAAGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG6783 FBgn0037913 FBtr0100321,FBtr0100320 1 2 3 196 3R 7390316 7390334 TCAAGACCTCTGCCATCAG 59 7390070 7390088 CTTAACGTTGCCGATGGTG 59 NA DesignNoJunction Drosophila melanogaster 61 dpr5 FBgn0037908 FBtr0082395,FBtr0082394 3 2 2 185 3R 7326958 7329142 CAATACTTCGGCCATCTGG 58 7329291 7329309 TTGTCGTATCCAGGACACC 59 NA Drosophila melanogaster 61 CG17230 FBgn0046225 FBtr0082392 2 1 2 107 3R 7263811 7289756 ATACGGTACAGGAGGAAGG 57 7289827 7289845 TTGTGTTCCTGTTCCATGC 58 NA InUTR Drosophila melanogaster 61 Irbp FBgn0011774 FBtr0082385 1 1 1 80 3R 7236523 7236788 TTGTCAAGAGCTATCGAACTG 58 7236830 7236848 CAACTTACGATCGGACAGG 58 NA Drosophila melanogaster 61 SelR FBgn0037847 FBtr0273346,FBtr0273345,FBtr0082294,FBtr0082292,FBtr0273347,FBtr0082295,FBtr0082291 1 7 7 97 3R 6692601 6692619 TACGGTGAACAAGGAGGAG 58 6692407 6692540 TGTAGCAACCTGTGAAGGG 59 NA Drosophila melanogaster 61 CG14684 FBgn0037824 FBtr0082268 1 1 1 60 3R 6532857 6532875 ATTAGGCTGAAGACTGCGA 58 6532899 6532917 ATAGCTCGGAAAGAGTCGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sle FBgn0037810 FBtr0082231,FBtr0082232 2 2 2 152 3R 6162874 6162954 AGAAAGAGCATCTTGCCAG 57 6163070 6163088 TTACATCCTTCTTCAGCGC 58 NA Drosophila melanogaster 61 CG3940 FBgn0037788 FBtr0082179 1 1 1 80 3R 5938527 5943342 CCTTAATAGTCTGCTGCTCTG 58 5943384 5943402 GCTCATCCTGGTTGTTGTC 58 NA Drosophila melanogaster 61 CG5361 FBgn0037786 FBtr0082201 3 1 1 60 3R 5900823 5900843 ACTAAGGCCACAAGATTTGAC 58 5900783 5900807 GATTCCCTGTATCACAAATATCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8500 FBgn0037754 FBtr0082139 2 1 1 130 3R 5611790 5611867 GTACAGACAGGTCATAAGCTG 58 5611959 5611977 AGTAGACCAGGATGAAGGC 58 NA Drosophila melanogaster 61 CG34409 FBgn0085438 FBtr0112676 1 1 1 80 3R 5569503 5569521 TCATCCGAACTACGACCAG 58 5569377 5569461 GGTGTGAAAGTGCCATTAGTG 59 NA Drosophila melanogaster 61 hyd FBgn0002431 FBtr0082090 1 1 1 80 3R 5545333 5545451 GAATCTGGATAACTCTGACGA 57 5545273 5545293 AGTATTTGCTCAGAAGGAGAC 57 NA Drosophila melanogaster 61 CG18542 FBgn0037731 FBtr0082084 3 1 1 87 3R 5511901 5511977 AGTTGATGAGGACCAAACCA 59 5512027 5512045 TAGCTAGCTTCCTTCGGTG 58 NA Nonspecific Drosophila melanogaster 61 CG33937 FBgn0053937 FBtr0091947 1 1 2 60 3R 5181415 5182097 TTGTAAATAAGGCGCACTAACC 59 5182117 5182136 CGCATCGAAGTATAGGAGAG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 PQBP-1 FBgn0250829 FBtr0301971 1 1 1 80 3R 4214519 4215713 ATCGGATAAAGACAGCGAG 57 4214457 4214478 GTGTAAATCGAATCACCTTGAG 57 NA Drosophila melanogaster 61 CG42285 FBgn0259181 FBtr0299665 3 1 1 133 3R 4194303 4194866 GAACCTAGATTGTCGCGAG 58 4194188 4194206 ATTTCGTCTTGATGGCCAC 58 NA Drosophila melanogaster 61 Or85a FBgn0037576 FBtr0081836 1 1 1 80 3R 4148576 4148594 CACAATGTTCAGCAGTCGA 58 4148635 4148710 CTTGGCCATCTTTATATTGGTG 57 NA Drosophila melanogaster 61 CG9630 FBgn0037561 FBtr0081866 2 1 1 60 3R 4094859 4094878 GAAGGCATCCGTAAACACTC 59 4094818 4094836 TTCTGGCTCGACAATCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm2 FBgn0014861 FBtr0081827 1 1 1 88 3R 4092882 4092900 AGACCGTTGATGAGATCCC 58 4092951 4093027 GTCGATGTTCGTTAGCTTGG 59 NA Drosophila melanogaster 61 Tom34 FBgn0010812 FBtr0081788 1 1 1 80 3R 3860593 3860670 GCCAGAGAAGGAATACTGC 58 3860714 3860732 GCACTCACATGATACTCGC 58 NA Drosophila melanogaster 61 CG2781 FBgn0037534 FBtr0081823 1 1 1 80 3R 3809806 3810525 GTACATCGTAAAGGTACTCGGA 59 3809747 3809768 TTGTAGACGATCAAGACTTTGC 59 NA Drosophila melanogaster 61 CG2678 FBgn0014931 FBtr0081757 2 1 1 83 3R 3740989 3741647 CTAAAGCCGAAACCGATATGC 59 3741690 3741710 ATTGTGAGTAAGCATATGCCG 58 NA Drosophila melanogaster 61 Mst84Db FBgn0004173 FBtr0081586 1 1 1 104 3R 3191109 3191127 CTTGTGGATCTTGCTGTGC 59 3191023 3191041 TACAAGGTCCACAGCAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 dj FBgn0019828 FBtr0089742 3 1 2 90 3R 2885200 2885279 GAACTTTAAGGAAGCCGATGAC 59 2885330 2885348 TGCAGAACGAATGTGTTGC 59 NA Drosophila melanogaster 61 CG1021 FBgn0037443 FBtr0290327,FBtr0289940,FBtr0290326,FBtr0289939,FBtr0300261 3 5 5 125 3R 2217058 2217076 GATCCAATGCACCAAGGAG 58 2216805 2216890 TCAAAGACAGCCTTGATGC 58 NA Drosophila melanogaster 61 CG1077 FBgn0037405 FBtr0078587 2 1 1 80 3R 1993434 1993610 CATGAATGGCCCTCTATATGAC 58 1993651 1993669 GGCTGATATCTTGAGCTGC 58 NA Drosophila melanogaster 61 CG31555 FBgn0051555 FBtr0078633 3 1 1 61 3R 1637335 1637359 GAACTGTGAATTCGAGTATAGTACC 59 1637378 1637396 GTACCACCTGGTTTGTACC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 sec8 FBgn0086685 FBtr0078677 2 1 1 100 3R 1583808 1583885 GATGCTGGAGCAAATCCAG 59 1583726 1583744 CATCAGTTAGGGCCTTGCT 59 NA Drosophila melanogaster 61 Madm FBgn0027497 FBtr0078722 1 1 1 94 3R 1569811 1569829 CTGCTCTTTCACCCATTGC 59 1570739 1570757 GAGAACATAGTGCGGTTGG 58 NA DesignNoJunction Drosophila melanogaster 61 MTA1-like FBgn0027951 FBtr0078734,FBtr0078733,FBtr0290206 2 3 3 84 3R 1468678 1468755 CATCACACTGTTTCACGCA 59 1468612 1468630 AGTGGAAGGAACTAGCGAC 59 NA Drosophila melanogaster 61 CG11999 FBgn0037312 FBtr0078807 2 1 1 142 3R 1180311 1180329 ACTTCTTACAGGACTGGCG 59 1180060 1180078 ATCCGTACTTGACGTCGTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG34306 FBgn0085335 FBtr0112502 3 1 1 60 3R 758254 758272 TGGTTAGGAGTGCCATTGG 59 758293 758453 GGCTCTTGAACTTGATATTGGT 58 NA DesignNoJunction Drosophila melanogaster 61 CG14641 FBgn0037220 FBtr0078985 3 1 1 60 3R 57667 57685 ATTCAAGTACGAGATGCGG 57 57625 57643 TGTTAACGTCGCTTTGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12581 FBgn0037213 FBtr0078961,FBtr0078962 2 2 2 80 3R 1902 7790 CCGTCAAGAACTTCTACGG 58 7834 7852 TCTCGTCTCCGTTAAACGA 58 NA Drosophila melanogaster 61 CR42548 FBgn0260721 FBtr0301175 2 1 1 100 3L 17878597 17878615 AGGGCTTGATAATTGTGGC 58 17878477 17878495 GTTCATGTAGCCAGCACTG 58 NA DesignNoJunction Drosophila melanogaster 61 CR15821 FBgn0035311 FBtr0072914 3 1 1 80 3L 2172687 2172762 ACTTCCAGTTACCGAATGCA 59 2172626 2172648 GTTCGATTTCCATACCATCTTCC 59 NA Drosophila melanogaster 61 CG33217 FBgn0053217 FBtr0070045 2 1 1 73 3L 23119495 23119829 CTATGGCACTCCTTCTGGA 58 23119865 23119884 AGATAAATGAGCAGATGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 CG12768 FBgn0037206 FBtr0078560 3 1 1 151 3L 22905320 22906368 ATTCGGGAACGCAAATCTC 58 22906481 22906501 TACTGATATTCGTCTAGGGCC 58 NA Drosophila melanogaster 61 CG12768 FBgn0037206 FBtr0078560 2 1 1 150 3L 22905320 22906368 ATTCGGGAACGCAAATCTC 58 22906481 22906500 ACTGATATTCGTCTAGGGCC 58 NA Drosophila melanogaster 61 CG11133 FBgn0037205 FBtr0078559 1 1 1 60 3L 22896931 22896951 GATTTGACAGTGAAACTCCAG 57 22896971 22896991 CACAGTTCGTAGAGAAGATCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14451 FBgn0037183 FBtr0078538 3 1 1 60 3L 22714590 22714609 AATATGTTGACACCCATCGC 58 22714549 22714567 AGACGGTCAGACTGAAAGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14455 FBgn0037175 FBtr0078543 3 1 1 103 3L 22680160 22680178 TAAGGAGGTCATCCGAAGC 58 22680010 22680028 CAATGCTCGTGAGGATGAC 58 NA DesignNoJunction Drosophila melanogaster 61 CG15374 FBgn0037152 FBtr0078483 3 1 1 60 3L 22158662 22158682 CAAATTGTCTCCTGCTTCTCC 59 22158702 22158722 CTAGCGGAAGTAAGTCTTTGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 RpLP0 FBgn0000100 FBtr0078481 2 1 1 126 3L 22069434 22069526 AGGTTGTGGAACTGTTCGA 59 22069616 22069634 TTCTTGCCCATAAGCACGA 59 NA Drosophila melanogaster 61 CG7470 FBgn0037146 FBtr0078477 2 1 1 80 3L 21969814 21969894 ATAGCAAAGAGTTTGACGGC 59 21969937 21969955 CGTAGAGGGACATCAGACC 59 NA Drosophila melanogaster 61 CG14564 FBgn0037131 FBtr0078435 1 1 1 75 3L 21750361 21750379 CTCATCCACACCCTATCCG 59 21750418 21750436 CTTGGGTTGAACTTCACCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6049 FBgn0037081 FBtr0078400,FBtr0078399,FBtr0078398 1 3 3 80 3L 21414147 21414218 GGTTATCTATGATCGCCATCC 58 21414087 21414106 ATTTGAATGACGAGGTCAGC 58 NA Drosophila melanogaster 61 park FBgn0041100 FBtr0078318,FBtr0078319 3 2 2 117 3L 21189473 21189553 ACAATAGAGCAATGTGACTTGG 59 21189377 21189395 TAAGCGAAGGTTCCTCCTC 58 NA Drosophila melanogaster 61 ko FBgn0020294 FBtr0078324 1 1 1 83 3L 21072049 21072162 CATCTTCACACCAGAACGC 59 21071984 21072004 TGACCATAGGCTAGACTACCA 59 NA Drosophila melanogaster 61 CG10585 FBgn0037044 FBtr0078287 1 1 1 81 3L 21021992 21022189 ATCTGGTGCACAATAGCGT 59 21022234 21022252 AACGACATGTCGTCGTAGG 59 NA Drosophila melanogaster 61 CG32425 FBgn0052425 FBtr0113436 3 1 5 109 3L 20491481 20491499 CCGATGATATGCCAGATGC 58 20503137 20503155 CATTAGCTCGACGTTGCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG5130 FBgn0037000 FBtr0078220,FBtr0078221 2 2 2 95 3L 20478512 20478597 ATCCCTACATGAAGGAATCCTG 59 20478438 20478456 GGAACTTGGTGACCAAGGT 59 NA Drosophila melanogaster 61 CG32219 FBgn0052219 FBtr0074914 1 1 1 140 3L 19944027 19944112 CATAATCATTCGGCTGTCGA 58 19943906 19943924 ACTTTCCTCATCCGATGCA 59 NA Drosophila melanogaster 61 CG8334 FBgn0036913 FBtr0074890 2 1 1 80 3L 19867029 19867047 TCTCCTTTAACGACCTGCT 58 19867091 19867176 GGTTCCACAGGAATTTGGT 58 NA Drosophila melanogaster 61 l(3)76BDm FBgn0260655 FBtr0074966 1 1 1 80 3L 19611081 19611393 GTTGCCAAATGATGCACAC 58 19611019 19611039 ACATCACAGAAATTGAGACGG 58 NA Drosophila melanogaster 61 CG9376 FBgn0036893 FBtr0074946 2 1 1 62 3L 19606113 19606131 AAACCGGACTTTGTGACCA 59 19606155 19606175 CAGTGCATTGTACTTGAACAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Taf6 FBgn0010417 FBtr0074941 3 1 1 111 3L 19593043 19593063 GTTAAGGTCAATGTGGTTCAG 57 19593135 19593216 GTTCGTGGAGGTATTTCTCC 58 NA Drosophila melanogaster 61 CG9619 FBgn0036862 FBtr0075014 2 1 1 225 3L 19278190 19278331 GATCACAGACAACCGAGGA 59 19277983 19278001 GAGGCAGTTTCGATCAAGC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6812 FBgn0036843 FBtr0075025 2 1 1 116 3L 19056807 19057436 CAGGTATCAACCCTCATCGA 59 19057515 19057533 ATCGCTGGATACGACTACG 59 NA Drosophila melanogaster 61 CG6856 FBgn0036819 FBtr0075062 2 1 1 96 3L 18861699 18861717 CTTCCGGGAGGATATGGAG 58 18861835 18861853 TTCAAGGACGACTTCCTCC 59 NA DesignNoJunction Drosophila melanogaster 61 l(3)neo26 FBgn0036815 FBtr0075056 1 1 2 84 3L 18814279 18814297 TATGTTTCCAAAGTGGCGG 58 18814345 18814420 TCAATGGAGGCCATACTGG 59 NA Nonspecific, InUTR Drosophila melanogaster 61 CG6893 FBgn0036807 FBtr0114373 1 1 1 82 3L 18687416 18687434 GGATAGGACAACATCCAGC 57 18687480 18687552 ACCGTGGACGTATTATCGT 58 NA InUTR Drosophila melanogaster 61 CG18231 FBgn0036796 FBtr0300052 3 1 1 80 3L 18601499 18601573 CATATTCGGCATGATCAAGTC 57 18601615 18601633 GCCTTATTCAGAGCTTCGT 57 NA Drosophila melanogaster 61 CG32188 FBgn0052188 FBtr0075164 1 1 1 297 3L 17826674 17826692 GCGCTTTCTACTAGCTCTC 57 17826395 17826413 AACTCGTACAACAACCCGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Ccn FBgn0052183 FBtr0075185,FBtr0075186 1 2 2 95 3L 17722960 17723293 CCCACAGGATACGAAAGGG 59 17723351 17723370 GATACAGCTTTCGGGAAACG 59 NA Drosophila melanogaster 61 Int6 FBgn0025582 FBtr0075345 2 1 1 87 3L 16779738 16779851 GCAAGGAGATCTACAACCAG 58 16779670 16779688 GTGTCCATCGTGTAATCGA 57 NA Drosophila melanogaster 61 roq FBgn0036621 FBtr0075423 2 1 1 128 3L 16370274 16370293 CATCTGCTGCAATGAATTCG 58 16370100 16370183 ACAATCACGGTCTGATCGA 58 NA Drosophila melanogaster 61 CG18814 FBgn0042137 FBtr0075385 3 1 1 113 3L 16363481 16363499 GTGAACATTTCCTCGGTGG 58 16363575 16363649 ATAATGGATGGGACTAGCCA 58 NA Drosophila melanogaster 61 CG4998 FBgn0036612 FBtr0075377 2 1 2 126 3L 16335201 16335219 CTGCTGAGGCTAAGAAGGA 58 16335309 16336904 TAATAGGCACGCCCTTGAG 59 NA Drosophila melanogaster 61 CG32160 FBgn0052160 FBtr0075367 2 1 1 178 3L 16302589 16302607 TCTGGAGAAGTACTTCGGA 57 16302989 16303008 GCCGAGATTAGCATAACCTG 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13067 FBgn0036589 FBtr0075465 3 1 1 238 3L 16264444 16264536 TCAAATACTTCGCTCTGTGC 58 16264737 16264755 GTCTTAACGGTAGTAGGCG 57 NA DesignRelaxed, InUTR Drosophila melanogaster 61 mib1 FBgn0036558 FBtr0075520 2 1 1 122 3L 16000123 16000141 GAATCTGTCAGCAGCTGGA 59 15999960 16000039 ACAGGACACATAGTCTGTTCC 59 NA Drosophila melanogaster 61 CG17026 FBgn0036550 FBtr0075513 2 1 1 96 3L 15969057 15969075 CATACGAGGTTTGCTTGCT 58 15969135 15969210 TATGCCAGGAGTCTTCTGG 58 NA Drosophila melanogaster 61 Dcp2 FBgn0036534 FBtr0075540,FBtr0100528,FBtr0075539,FBtr0075538 3 4 4 97 3L 15816273 15816357 AGTTGTTCCAACACATTCCC 58 15816195 15816213 ATAAGTGGGCACCGATAGC 59 NA Drosophila melanogaster 61 obst-H FBgn0053983 FBtr0100028 2 1 1 84 3L 15521824 15521844 ATGCACTGTGATAATGAGCTG 58 15521696 15521778 GATCTTCGAAGGCACACTG 58 NA Drosophila melanogaster 61 CG13463 FBgn0036470 FBtr0075631 2 1 1 60 3L 15048280 15048298 AGATTTCCCAGAGTGACGA 58 15048322 15048340 TCAGTTTGATCCTCCTGGT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18649 FBgn0036469 FBtr0075663 3 1 1 60 3L 15047126 15047144 AAATCCGGTGGACATTGAC 58 15047084 15047104 CTCATCAGCAATTCGTTTGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG42507 FBgn0260233 FBtr0300642,FBtr0300641 3 2 2 233 3L 14742834 14744382 AGGCAATTTAAATCAGGGCA 58 14742620 14742638 CTCAATTGAGTTGCTGCTG 57 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 ImpL1 FBgn0001256 FBtr0075842 3 1 3 89 3L 13375928 13376021 CATCGTAGCAGTAGCAGCT 59 13376073 13376092 TCATAGTGATGATCGGAGCC 59 NA Drosophila melanogaster 61 CG11251 FBgn0036346 FBtr0075891 2 1 1 60 3L 13082077 13082096 TCCTTATTCACCGCCTATCC 59 13082036 13082055 CCCGTTAGTATAATGTCGCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Tsf2 FBgn0036299 FBtr0075966 1 1 1 80 3L 12525863 12525949 CAACTCCGATAAACTTTGTACG 57 12525804 12525822 TAGCCGAAGTAGGGATCTG 58 NA Drosophila melanogaster 61 CG32103 FBgn0052103 FBtr0075983,FBtr0075982,FBtr0075984 3 3 3 121 3L 12398196 12398214 AGAAAGAGATGCAGACGGG 59 12398028 12398113 TGTTTGTACCTGCAAGTACAC 58 NA Drosophila melanogaster 61 CG5645 FBgn0036254 FBtr0076024 3 1 1 90 3L 12127977 12128056 TAGAAGAGATCTTGCTGGCC 59 12127906 12127924 TTCTCTACGTGTTCCGGTC 59 NA Drosophila melanogaster 61 Rpt4R FBgn0036224 FBtr0076040 2 1 1 85 3L 11935811 11935904 ATTTCTTGAAGGTCGTTTCCTC 59 11935950 11935968 GGCGTATGCAAACATCTCC 59 NA Drosophila melanogaster 61 CG6083 FBgn0036183 FBtr0076137 2 1 1 89 3L 11618777 11618796 GACTGCGCTCATATCTATGG 58 11618643 11618725 GAGTTCATCTCGTGTGACC 58 NA Drosophila melanogaster 61 CG6091 FBgn0036180 FBtr0273305,FBtr0301145,FBtr0273304,FBtr0273306 1 4 4 80 3L 11600291 11600309 GGATACAAGCCCGAGATCC 59 11600169 11600250 ATCTTCAAACATGGTCTGTTCG 59 NA Drosophila melanogaster 61 CG7616 FBgn0036142 FBtr0076161 3 1 1 81 3L 11164743 11164762 GCCAGGAATAATTTCGAGCA 58 11164806 11164890 TGTTCAGATTACGCACCAC 58 NA Drosophila melanogaster 61 CG6321 FBgn0036117 FBtr0076242 1 1 1 80 3L 11054003 11054083 CACAGATCATTGTCTGGAACG 59 11053943 11053962 TCGAATGTTCCACTTGTTGG 58 NA Drosophila melanogaster 61 Fad2 FBgn0029172 FBtr0076196 2 1 1 60 3L 11016720 11016739 CTAAGCAATCGGAAGACCAC 58 11016760 11016780 GCACTATATTGACCCATACCA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076317,FBtr0076324,FBtr0076318,FBtr0076321,FBtr0076320,FBtr0076319,FBtr0301228,FBtr0076322,FBtr0076323,FBtr0076325,FBtr0076326 2 12 12 87 3L 9773788 9773876 TCCTCATGAGATCTTTGTGCA 59 9773925 9773943 ATACTTGATCCAACGGGCC 59 NA Drosophila melanogaster 61 CG14174 FBgn0036036 FBtr0076402 2 1 1 74 3L 9712475 9712493 GAAACAACCTCCGTTGGTG 59 9712594 9712613 CTGTTGATGACCACGAACAC 59 NA DesignNoJunction Drosophila melanogaster 61 CG3280 FBgn0036017 FBtr0273440 2 1 1 80 3L 9600547 9600568 TGGTCAATATACTGGTGATGGG 59 9600605 9600773 CCAAATCCTCAGAGTGATTAACC 59 NA Drosophila melanogaster 61 CG32037 FBgn0052037 FBtr0076469 3 1 1 98 3L 9483494 9483512 CTTCTGCATGGTCACAGTC 58 9483323 9483432 GCTGAAGAGATGGGTTGTG 58 NA Drosophila melanogaster 61 CG3552 FBgn0035999 FBtr0076463,FBtr0114371 1 2 2 80 3L 9452145 9452166 ACTGTGTAAACAAGGATTTGGC 59 9452207 9452291 TATCAGCATCTGGCAAGGG 59 NA Drosophila melanogaster 61 CG4911 FBgn0035959 FBtr0076542 2 1 1 100 3L 9064609 9064690 ATCGAACAATGCTTTGTGGAG 59 9064529 9064547 TAGTATGAGAGGGCCTCGA 58 NA Drosophila melanogaster 61 CG32023 FBgn0052023 FBtr0076588 2 1 1 60 3L 8797256 8797276 GCAGTATACTCAGCTCCTGAG 59 8797160 8797183 GACTGCCATATAGGATATGATCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Zasp66 FBgn0035917 FBtr0089567,FBtr0089564,FBtr0089566,FBtr0089565,FBtr0089562 2 5 13 84 3L 8623725 8627691 TTCAATACCAACCCTACCGT 58 8627738 8627756 AAGTAGGACTCTGTCGTGG 58 NA Drosophila melanogaster 61 CG32355 FBgn0052355 FBtr0076632 2 1 1 60 3L 8590391 8590412 CTACGAGAGTAAACTGGAGGAC 59 8590433 8590451 CTCATACTCGCTGTCCCTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG7201 FBgn0035865 FBtr0076716 1 1 1 108 3L 8284573 8284591 CACTTCGCTGACATTCGTG 59 8284415 8284501 GTCGAAGTCAATGGTGACG 59 NA Drosophila melanogaster 61 CG8038 FBgn0035831 FBtr0076763 1 1 1 60 3L 7971155 7971173 AGTTCACCATATTCGGGCA 59 7971113 7971131 ATCTTCTTAACGCTTCGCT 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 HP4 FBgn0035829 FBtr0076765,FBtr0076764 1 2 2 60 3L 7969033 7969051 TACCAGGTCCGAAAGTGTC 59 7968991 7969009 AATTCGGAGAAGTCGACGA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8042 FBgn0027554 FBtr0076767,FBtr0076766 2 2 2 171 3L 7966670 7966757 ATATGCAGGAACAGATTAAGCG 59 7966520 7966538 GTTGTGATCACGTTGGAGG 58 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 1 6 6 80 3L 7527254 7527341 GCAGGATTTCAAGGATCCA 57 7527383 7527403 AGCAGATCTAGCAAATGACTC 58 NA Drosophila melanogaster 61 mthl6 FBgn0035789 FBtr0076789 1 1 1 80 3L 7480372 7480454 TGGATAAACACCTATGACTGG 57 7480493 7480514 CGTGACCACATTGAATAAACTC 58 NA Drosophila melanogaster 61 CG17742 FBgn0035746 FBtr0076922 3 1 1 62 3L 7154513 7154531 CAACGCCAACAACATTCAC 58 7154469 7154488 CGAATAATCCGATTTCTCGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34030 FBgn0054030 FBtr0100085 2 1 1 81 3L 7067986 7068007 GCCATATTCCTTCTCATTCGAC 59 7067837 7067946 GACAGTAAGCTACAATGGAGC 58 NA Drosophila melanogaster 61 CG10063 FBgn0035727 FBtr0076935 3 1 1 183 3L 6965323 6965403 TCACAGCGTGGAACTACTC 59 6965158 6965176 TTCTCTGGGTTATTGCCCA 58 NA Drosophila melanogaster 61 CG10063 FBgn0035727 FBtr0076935 1 1 1 165 3L 6965323 6965403 TCACAGCGTGGAACTACTC 59 6965176 6965194 AAGGTGGATGGAAACCCTG 59 NA Drosophila melanogaster 61 CG10103 FBgn0035715 FBtr0076949 1 1 1 80 3L 6749372 6749392 AGGAAATAGCCGACTATTTGG 58 6749248 6749333 AGTAGTCCTCCCTAATGATGTG 58 NA Drosophila melanogaster 61 Gr65a FBgn0041232 FBtr0300026 2 1 1 61 3L 6659884 6659968 CATAAGGAAACTGCTAGAACGA 58 6659844 6659864 GTGATACGTTCCCAAATTTCC 57 NA DesignNoJunction Drosophila melanogaster 61 CG18769 FBgn0042185 FBtr0076973,FBtr0076975,FBtr0076970,FBtr0076974,FBtr0076972,FBtr0076971 2 6 6 91 3L 6584022 6584040 GTGAATCCTCCCAAACGTG 58 6584095 6584172 AATGCCTCGTAGAGCTGAG 59 NA Drosophila melanogaster 61 Or65a FBgn0041625 FBtr0077004 3 1 1 138 3L 6313841 6313913 ACCAGTTGAAAGCCCTAGG 59 6314013 6314033 CCGATGGATTCACTGATACCA 59 NA Drosophila melanogaster 61 Lcp65Ag1 FBgn0020638 FBtr0077058 1 1 1 80 3L 6128128 6128208 AGCTTCAAATACGACTGGGA 59 6128067 6128086 GTTCTCAGTTCCAATGTCGT 58 NA Nonspecific Drosophila melanogaster 61 Lcp65Ag2 FBgn0020637 FBtr0077059 2 1 1 60 3L 6126448 6126529 AAAGCTTCAAATACGACTGGG 59 6126408 6126426 AGCTGACCTACAGCTTGAG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG5537 FBgn0035639 FBtr0077112 3 1 1 145 3L 5804407 5804491 ATATTGCGCGACAAGAACAC 59 5804599 5804617 AGTCCCTCGTAAATCGCAC 59 NA Drosophila melanogaster 61 Blimp-1 FBgn0035625 FBtr0077089 3 1 1 86 3L 5637716 5637838 CAACGCCAAATGTTAAGACTG 58 5637886 5637904 TTGGAATGCCTTCGAATGG 58 NA Drosophila melanogaster 61 Msr-110 FBgn0015766 FBtr0077132 3 1 3 176 3L 5570028 5570258 TCCTCTACTGCTATAGATGACC 58 5566865 5566883 GACACGATGATGGTGAAGG 58 NA InUTR Drosophila melanogaster 61 membrin FBgn0260856 FBtr0077145 2 1 1 60 3L 5359811 5359831 AATTGAAGATTACCCAGGCGA 59 5359920 5359940 ACCTTATACAACAGCACATCC 58 NA DesignNoJunction Drosophila melanogaster 61 CG4623 FBgn0035587 FBtr0077167 3 1 1 134 3L 5136352 5136428 CAAATTTCGCGGTGATCGA 59 5136525 5136544 AGATCGTCGTGTATGAAGGA 58 NA Drosophila melanogaster 61 CHMP2B FBgn0035589 FBtr0077166 2 1 1 60 3L 5133357 5133375 GATCGGCATCGAGATCTCC 59 5133399 5133417 AAAGTCTGAGGATCCCGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG15212 FBgn0040842 FBtr0077163 1 1 1 90 3L 5124707 5124863 AAGTACCTAGCTCTGACCA 57 5124917 5124935 TATTATCGCCGATCAGGGA 57 NA Drosophila melanogaster 61 CG4597 FBgn0035594 FBtr0077162 3 1 1 60 3L 5122828 5122846 GTTCAAGTGCCCTTTCCTG 59 5122868 5122888 GATCTGACAGCTTCCTTACGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13712 FBgn0035570 FBtr0073364 2 1 1 76 3L 4709643 4709661 TTTGAACTCGAGTTCGACG 58 4709585 4709605 CTGTCCCTATATTCCCGTTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32243 FBgn0052243 FBtr0073322 2 1 1 80 3L 4540645 4540722 CGATGCGTGGATGAAACTG 59 4540583 4540605 GGAATCAGACATTGAGTACTGTG 59 NA Drosophila melanogaster 61 CG15019 FBgn0035541 FBtr0073335,FBtr0113139 2 2 2 61 3L 4405802 4405823 GATGTGGTCGAAATTAAGACCG 59 4405593 4405611 TGCTCCTCCTTGGATTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG32240 FBgn0052240 FBtr0073336 2 1 1 134 3L 4381318 4381394 ATTTGTGACGGTTCTCAGC 58 4381202 4381220 CTTTGAATCACCCGTCGTC 59 NA Drosophila melanogaster 61 Hexo1 FBgn0041630 FBtr0300774,FBtr0073235,FBtr0073237,FBtr0073236 3 4 4 95 3L 4289089 4289107 GACGAAATGAAGTCGACGC 59 4289165 4289258 GTAAACCAAGTCATCCGAGC 59 NA InUTR Drosophila melanogaster 61 CG1309 FBgn0035519 FBtr0073229 2 1 1 80 3L 4260251 4260378 AAACTTATGAGACCCATGCTG 58 4260420 4260438 GGTCTTAACCTTGTAGCGG 58 NA Drosophila melanogaster 61 ImpL2 FBgn0001257 FBtr0073248,FBtr0073249,FBtr0073250 1 3 3 89 3L 4224985 4225005 GGATATGGGCAACTACAAGTG 58 4224841 4224936 TCTTCCTCATTAAGTACGGGA 58 NA Drosophila melanogaster 61 Gr64e FBgn0045476 FBtr0073199,FBtr0073200 3 2 2 80 3L 4035082 4035168 ATCCTAAAGAGTATGCAGGCC 59 4035210 4035228 GCGACCAAGTAGGTAGACC 59 NA Nonspecific Drosophila melanogaster 61 Gr64d FBgn0035486 FBtr0073197,FBtr0073198 2 2 2 60 3L 4032340 4032364 CTCTCAACTAAGATTGTACTGAACG 59 4032382 4032471 AACTCAAAGAGCCCATGGT 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG14977 FBgn0035469 FBtr0073158 3 1 1 80 3L 3897078 3897153 AATCTCACAGAGACCATCGA 58 3897195 3897214 GTAGTGATGCTCGTAATCGA 57 NA Drosophila melanogaster 61 CG14974 FBgn0040694 FBtr0073140 2 1 1 89 3L 3620680 3620751 GGCAGATAATTGCTCCATAGAG 58 3620612 3620630 CCCTCTGGAAGATCATCCA 58 NA Drosophila melanogaster 61 CG32267 FBgn0052267 FBtr0073142 1 1 1 60 3L 3471949 3471970 CAATTTCATCCTATTTGGAGCC 57 3471840 3471928 CTTCAGGACTATGGGAGCC 59 NA DesignNoJunction Drosophila melanogaster 61 CycJ FBgn0010317 FBtr0073128,FBtr0073127 1 2 2 72 3L 3466812 3466830 CTGCAGTTGCTCAAACTGG 59 3466866 3466961 TATAGTAGACGGCCAGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG12014 FBgn0035445 FBtr0073077 2 1 1 86 3L 3379724 3379743 GGCTATAGTCTCAGAACCGA 58 3379792 3379877 CACATCGTGCCAATCTCTG 59 NA Drosophila melanogaster 61 ZnT63C FBgn0035432 FBtr0073057,FBtr0073055,FBtr0073058,FBtr0073054,FBtr0073056 1 5 5 80 3L 3310691 3310776 ATTCCTGTCTGTGAAGATGTC 57 3310818 3310836 AAAGCACCCAAGACTTCTG 58 NA Drosophila melanogaster 61 CG17737 FBgn0035423 FBtr0073044 3 1 1 81 3L 3223509 3223773 AGAATTTAAACACTCGTGACCC 59 3223814 3223833 CTTATATGCACTAGCCCGTC 58 NA Drosophila melanogaster 61 CG32277 FBgn0052277 FBtr0073103 1 1 1 60 3L 3205420 3205442 TACTCCTTATTGGACTAGCACTG 59 3205382 3205402 CGAAGAGTGAATAGTGAGCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG32284 FBgn0052284 FBtr0073037 3 1 1 95 3L 3186883 3186967 GATCCAACTTGTAGAACCTACG 58 3187021 3187041 GGGATCAAAGTACTGGTTCAC 58 NA Drosophila melanogaster 61 CG42494 FBgn0260026 FBtr0300584,FBtr0300583 2 2 2 101 3L 3185485 3185503 CGATTCGATATTTGGCGGC 59 3185567 3185642 ATGGAACTCCGTCATAGCAG 59 NA Drosophila melanogaster 61 pfk FBgn0035405 FBtr0073028,FBtr0073027 3 2 2 60 3L 3160819 3160838 ACTTTCACCATAACGCAGTC 58 3160861 3160879 TACCCGTTTCATCTGCCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 1 3 3 80 3L 3150144 3150225 GTACTTTCAGGCTTTGTTCAC 57 3150266 3150285 TTTAGGTCATCGTACTGCAC 57 NA Drosophila melanogaster 61 CG1246 FBgn0035360 FBtr0072938 1 1 1 80 3L 2648723 2648743 GGATGGCGTTACTGATTTCAG 59 2648785 2648871 TCACCACATTCCTCCTGTG 59 NA Drosophila melanogaster 61 CG15877 FBgn0035337 FBtr0072899 3 1 1 60 3L 2377300 2377320 GTCTAATTCTAGCTCCACAGG 57 2377205 2377278 CTCTTGGCGGGTTTATCTG 58 NA DesignRelaxed Drosophila melanogaster 61 CG32301 FBgn0052301 FBtr0301320,FBtr0301321 3 2 2 82 3L 2245006 2245083 TGCGATGGACTTGATACTG 57 2245129 2245147 TCAGGACAATCACAACGTG 58 NA Drosophila melanogaster 61 CG13810 FBgn0035313 FBtr0072870 3 1 1 83 3L 2186040 2186126 TTCCGGATTTGTTGGTCCT 59 2186173 2186191 TGTCGTACACATAAGCCGA 58 NA Drosophila melanogaster 61 CG2021 FBgn0035271 FBtr0072791 2 1 1 60 3L 1777283 1777302 ACACAGTCTCCATCATTACG 57 1777242 1777260 TCGAATCCCTTGAGTGTCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13921 FBgn0035267 FBtr0072773,FBtr0072772 1 2 2 80 3L 1749646 1749727 TGGATAAGGAAGGAGTGCG 59 1749771 1749789 TCAGGCAGGAATAGAGGGA 59 NA Drosophila melanogaster 61 CG12104 FBgn0035238 FBtr0072825 2 1 1 112 3L 1602544 1602562 TTCCACACTCCCTCATTCG 59 1601899 1601917 AACATGGATTGATCCAGGC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7879 FBgn0035235 FBtr0072827,FBtr0072826 1 2 2 61 3L 1562994 1563980 TTTCATCGCTTTCAGCACC 59 1562951 1562969 GTTTCTCGCGATCCTTCAG 58 NA DesignRelaxed Drosophila melanogaster 61 ru FBgn0003295 FBtr0072681 3 1 1 84 3L 1384767 1384785 AACATCATGAAGGGTCTGC 58 1384833 1386222 AACACGAGAACCTCAAGGA 59 NA Drosophila melanogaster 61 msd1 FBgn0035209 FBtr0072678 1 1 1 92 3L 1331780 1331798 AAATGTCAGACGCTGTGGA 59 1331905 1331927 CCATTATCTCGTCTATCTTAGCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG9130 FBgn0035197 FBtr0072655,FBtr0072657 3 2 2 127 3L 1253219 1253309 CGAGTTCGATAGAGAATGCC 58 1253399 1253417 TCTTCTCCTGGATGAAGCG 59 NA Nonspecific Drosophila melanogaster 61 CG33966 FBgn0053966 FBtr0100007 2 1 1 96 3L 1234395 1234413 ACACTACGCACCAAGTACC 59 1234472 1234556 GCAGAATAACTATGGTGCCC 58 NA Drosophila melanogaster 61 CG13905 FBgn0035176 FBtr0289973 2 1 1 60 3L 903080 903098 GCTGGTTCAGACCTACCTC 60 903120 903140 GTTAATGGCTCTGATCACACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34056 FBgn0054056 FBtr0100833 2 1 1 86 3L 896474 896492 AATGAGGAAGGCCCTAGAG 58 896539 896616 ATCACAAAGGTGTCATCATCTG 58 NA Drosophila melanogaster 61 CG13896 FBgn0035159 FBtr0072602,FBtr0290220 3 2 2 60 3L 711110 711130 AATGATTTGTCAGAGTCTGCG 59 711070 711088 GTCTCAATGCCTCTTCGTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17129 FBgn0035151 FBtr0072612,FBtr0072614,FBtr0072613 3 3 3 115 3L 679820 679907 AAGAATTTAGCGACCTGGC 58 679723 679743 CGTTTCAACCATTTAGCTACC 57 NA InUTR Drosophila melanogaster 61 CG32343 FBgn0052343 FBtr0299831,FBtr0299838 2 2 2 86 3L 325966 326044 GCCAAGAACAAGAATATACGC 57 325900 325918 TTTCTGAAGGGACTTTGCC 58 NA Drosophila melanogaster 61 snoRNA:Psi28S-1175c FBgn0083003 FBtr0113529 1 1 1 81 2R 18494932 18494953 CCGAATCATTATTGAAAGGCAG 58 18494995 18495013 AGCATCACCCAATTTGCAC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33432 FBgn0053432 FBtr0086424 1 1 1 60 2R 15624533 15624553 TAGTACTTAGATGAGGGACCG 57 15624493 15624511 AAAGTTGTGGATGAGGCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 5SrRNA:CR33436 FBgn0053436 FBtr0086428 1 1 1 60 2R 15623109 15623127 ATACATCGGTTCTCGTCCG 59 15623067 15623085 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9c1 FBgn0015040 FBtr0072321 2 1 1 89 2R 20519473 20519549 ATTGATGAAGGCACTTCGG 58 20519601 20519620 TTTCGATACTTCATGGCACC 58 NA Drosophila melanogaster 61 CG3394 FBgn0034999 FBtr0072268,FBtr0072269 2 2 2 105 2R 20183277 20183295 GTTGGCCAGTCTAACACTG 58 20183364 20183440 CTGGAAAGCCTTTAGGTCC 57 NA Drosophila melanogaster 61 Ir60a FBgn0034994 FBtr0072274 2 1 1 82 2R 20137807 20137926 CGACTGAAATTCGATGTAAACC 58 20137746 20137766 AGTAATCCAGTCCAGTTAGCT 58 NA Drosophila melanogaster 61 CG10339 FBgn0034972 FBtr0072288 1 1 1 120 2R 19967251 19967600 TTTGTACCTGATGGACTGC 57 19967149 19967167 TCTGCTTGAAGACCAACTG 57 NA Drosophila melanogaster 61 CG5591 FBgn0034926 FBtr0072134 3 1 1 103 2R 19789677 19789762 AAACCAATGCGGGAATCAC 59 19789828 19789847 TTTCCGCCCAAATATAGCTG 58 NA Drosophila melanogaster 61 CG5549 FBgn0034911 FBtr0301162 3 1 1 81 2R 19718143 19721368 CCTGGAGCACAAAGTATTGC 59 19721412 19721430 CAGGTGCGAAGGTAGTAGG 59 NA Drosophila melanogaster 61 pita FBgn0034878 FBtr0072113,FBtr0072112 2 2 2 90 2R 19437533 19437551 CGACATCAGAAGAAGCGTC 58 19437405 19437479 AGTGGACTGTCTCATGACG 59 NA Drosophila melanogaster 61 CG30415 FBgn0250838 FBtr0072031,FBtr0072030 2 2 2 106 2R 19273700 19273718 AAGAACCAATGGATCTGGC 57 19273541 19273559 CATGCCTTCTTGTTCTCGG 58 NA DesignNoJunction Drosophila melanogaster 61 robo FBgn0005631 FBtr0071923,FBtr0071922 2 2 2 80 2R 18584836 18584921 GACACTCAAGTCACTATCTCG 58 18584776 18584796 AATACCCTGAGTATTCTCAGC 57 NA Drosophila melanogaster 61 Ugt58Fa FBgn0040091 FBtr0071934 3 1 1 83 2R 18531358 18531377 GAATGCAATTGCATTACGGC 59 18531143 18531318 GATTCCATTGAGATTCCATATTCCC 59 NA InUTR Drosophila melanogaster 61 ventrally-expressed-protein-D FBgn0053200 FBtr0071826 2 1 1 135 2R 18296221 18296298 AAGCCAAGATGATACCGCA 59 18296393 18296415 ATTCTCTGATAGACCTCATACGC 59 NA InUTR Drosophila melanogaster 61 ari-2 FBgn0025186 FBtr0071774 3 1 1 100 2R 18101010 18102391 ACTACTACAACACAGGCGAG 59 18102454 18102472 GATGTCCTCGACGGTTAGG 59 NA Drosophila melanogaster 61 CG3290 FBgn0034711 FBtr0071782 2 1 1 115 2R 18094906 18095076 ATTGAGCAGAACCTACTGC 57 18094809 18094827 TTACTGCTGCACTTACTCC 57 NA Drosophila melanogaster 61 CG6613 FBgn0034694 FBtr0071758 2 1 1 96 2R 17990877 17990955 AAGAGTTTGGAGGTCCTGG 59 17991015 17991033 ACAGGAAGGAGTCCTTCAG 58 NA Drosophila melanogaster 61 CG13501 FBgn0034684 FBtr0071804 2 1 1 93 2R 17948125 17948146 GATATCGCAATCACTTTCTGCA 59 17947995 17948071 ATATGATGCGTCCACTCCG 59 NA Drosophila melanogaster 61 CG34370 FBgn0085399 FBtr0299544 2 1 1 80 2R 17892531 17892552 GATTCAAGAAGTTCAAAGTGGG 57 17892341 17892491 CATTGCCATCAACAATCTGC 58 NA Drosophila melanogaster 61 CG9284 FBgn0046297 FBtr0071717 3 1 2 138 2R 17691060 17691133 TTTGTTGGACAAGTCGCTG 59 17691234 17691253 CAGATGACAAGGACTTACGC 58 NA InUTR Drosophila melanogaster 61 HmgZ FBgn0010228 FBtr0071673,FBtr0071674 3 2 2 89 2R 17585955 17585973 AAGAAGGATAATCCCGGCA 58 17585801 17585902 CTCCCACTCGGTCTTATCC 59 NA Drosophila melanogaster 61 CG42381 FBgn0259727 FBtr0299989 3 1 1 80 2R 17557187 17557268 GTCTGACCAAGAATCACTACC 58 17557127 17557145 TGTGCCACTTTAAACAGCA 58 NA Nonspecific Drosophila melanogaster 61 CG30284 FBgn0050284 FBtr0071685 2 1 2 115 2R 17538919 17539022 AAACATCCGGGTACAGAAGG 59 17538823 17538841 CATGTTGAACAGTGCGTCC 59 NA Drosophila melanogaster 61 CG18870 FBgn0042180 FBtr0071688 3 1 1 83 2R 17503364 17503384 TATTGGAACTGCATAACGGTG 58 17503234 17503319 CACATCCGATCTGACTCGA 59 NA Drosophila melanogaster 61 CG30286 FBgn0050286 FBtr0300951,FBtr0300952 1 2 2 86 2R 17424146 17424165 ACATATCCGAGAGTCCTTGG 58 17424024 17424102 GGATGAATCGATGATTTACGAGAG 59 NA Drosophila melanogaster 61 CG9406 FBgn0034592 FBtr0071570 1 1 1 84 2R 17030213 17030231 ATTCCGTCGACTATCCAGG 58 17030279 17030349 GGTTCCATTTGTCGATCCA 57 NA Drosophila melanogaster 61 CG10527 FBgn0034583 FBtr0071541 3 1 1 139 2R 16959298 16960237 GCCAATCGAAGTCAACACC 59 16959177 16959195 AAATGGGACCGTTCTCCTC 59 NA DesignRelaxed Drosophila melanogaster 61 Ipk1 FBgn0050295 FBtr0113368,FBtr0071515 3 2 2 80 2R 16764064 16764082 AATTTATGGCGATCACGCG 59 16764123 16764777 ATAAGCACCATAATTTCACCGG 59 NA Drosophila melanogaster 61 CG11180 FBgn0034528 FBtr0086254 2 1 1 174 2R 16510757 16510775 AAGTACAACTTGTGTCCGC 58 16510545 16510563 CGAAACCCAATCCTTCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp57b FBgn0043534 FBtr0086293 1 1 1 67 2R 16391813 16391831 TTATTGTTCAGCTTGGCCA 57 16391924 16391943 TGAAAGTCTTGCCAATTCCA 58 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 RpS18 FBgn0010411 FBtr0086273,FBtr0086274 2 2 2 66 2R 16151893 16151912 GATGTCGATCTTACCAAGCG 58 16152001 16152019 TGATGGTCACCACCTTGTC 59 NA DesignNoJunction Drosophila melanogaster 61 Obp56h FBgn0034475 FBtr0086335 3 1 1 85 2R 15703126 15703202 CATGGGACAGTGTAATCCG 58 15703251 15703269 ACTCCTTGAGATCAGCCTC 58 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0301505,FBtr0086450,FBtr0086455,FBtr0086459,FBtr0086456,FBtr0301506,FBtr0086453,FBtr0301504,FBtr0100391,FBtr0100390,FBtr0086452,FBtr0301503,FBtr0086460,FBtr0100392,FBtr0086451,FBtr0086457,FBtr0086454 3 18 19 90 2R 15358915 15358933 TACGTTAGTGAGCGGTTCC 59 15358981 15359066 GAAGGGAATTCTATATTTGCCTCTG 59 NA Drosophila melanogaster 61 Rgk1 FBgn0034434 FBtr0301531 1 1 1 80 2R 15206943 15206962 AGAATATGAGGCAGCTCCTG 59 15205995 15206900 GTGAGCCATATCGCATCTG 58 NA Drosophila melanogaster 61 CG10474 FBgn0034427 FBtr0086561 2 1 1 60 2R 15173424 15173442 CTGCCTATGCGGATAACGA 59 15173382 15173403 ATAAGGATGTCTCCATCTCCAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33453 FBgn0053453 FBtr0086564 1 1 1 80 2R 15140190 15140274 ATACATGTCCTTATGGCTTGC 58 15140130 15140151 CATAGTCTCCTGAAGGTAATGG 57 NA Drosophila melanogaster 61 Hs3st-A FBgn0053147 FBtr0086608 1 1 1 80 2R 14633670 14633688 ATACCACCAGAGACAGCAG 58 14633730 14635564 GGTAGCCATAGGATATCCAGC 59 NA Drosophila melanogaster 61 GstE9 FBgn0063491 FBtr0086677 3 1 1 60 2R 14296675 14296696 TTCAGTATGAGTATAGGCTGGT 58 14296716 14296735 CTGAACTCCTTCGTCTTGTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18539 FBgn0034325 FBtr0086761 2 1 1 91 2R 14185902 14185920 AAATTGATCGACTTGGGCG 58 14185975 14186059 GTCTGCCTCCACCATAGTG 59 NA Drosophila melanogaster 61 CG5742 FBgn0034304 FBtr0086780 1 1 1 60 2R 14037958 14037976 GCGATACGAGGAATCAGAC 57 14037916 14037936 CAGTATATCGGTCGACATGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pAbp FBgn0003031 FBtr0086738,FBtr0086736,FBtr0086741,FBtr0086739,FBtr0086742,FBtr0086737,FBtr0086743,FBtr0086740 2 8 8 95 2R 14032395 14032485 AGGAAAGAATTCTGAGAAGCTC 58 14032541 14032559 ATCATCGGATACAGACGCT 58 NA Drosophila melanogaster 61 CG10911 FBgn0034295 FBtr0086808 2 1 1 107 2R 13941135 13941153 TCCAGTGCTACAGTGAAGC 59 13940750 13940768 TGATGAGACGCACTTCCTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG14488 FBgn0034278 FBtr0089558 1 1 1 83 2R 13655156 13655174 TAACGGAATCTCAAGCGAG 57 13655038 13655057 ATAGAAACTGTTCCATGCGA 57 NA DesignNoJunction Drosophila melanogaster 61 Ir54a FBgn0034272 FBtr0086865 1 1 1 60 2R 13632565 13632586 GAATCTCCTTCGAAACATGACC 59 13632604 13632625 ATCATTTAGCACAAAGTCCACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34193 FBgn0085222 FBtr0112386 2 1 1 60 2R 13397548 13397566 CAGGTGGGACATGGATCTG 59 13397656 13397675 CCCAATTCTTCGTCATAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 CG6435 FBgn0034165 FBtr0087045 2 1 1 93 2R 12761376 12761749 GTTCCAGCTATGAGGTGCA 59 12761806 12761824 CAAATTGCGGATGCATTGC 59 NA Drosophila melanogaster 61 Vkor FBgn0053544 FBtr0091510 2 1 1 60 2R 12666132 12666150 GTAAATGCTCCCAACGGAG 58 12666173 12666247 AAGAGCTCAAGAAGTACAGG 57 NA DesignNoJunction Drosophila melanogaster 61 Chit FBgn0013763 FBtr0087111 2 1 1 80 2R 12580419 12580500 AACTCATCCCTGTTCTACGA 58 12580540 12580561 TGTAAAGAAATCGAAGGTACCC 58 NA Drosophila melanogaster 61 Menl-2 FBgn0029153 FBtr0301867 2 1 4 72 2R 12304391 12304470 TGGAAAGTACAATAAGGTGGG 57 12304339 12304357 ATCAATCCCATGATGCCCA 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 Hmgs FBgn0010611 FBtr0087146 1 1 5 96 2R 12225932 12226960 AAACGTAACGAGCTCAGGA 59 12227020 12227038 GAAGAGAATCTCGATGGCG 58 NA InUTR Drosophila melanogaster 61 Vha44 FBgn0020611 FBtr0087175,FBtr0290032,FBtr0087173,FBtr0290031,FBtr0087176 1 5 5 80 2R 12213565 12213653 TCAGCAGTGCTGATAACGT 59 12213503 12213524 TGACCTTGTAGAACACATAGGG 59 NA Drosophila melanogaster 61 CG8443 FBgn0034087 FBtr0087242 2 1 1 83 2R 12079656 12079674 AAGCTGCTGTACAGAGCTC 59 12079719 12079801 GATGTTGCTATCGATCAGTGC 59 NA Drosophila melanogaster 61 CG8102 FBgn0034007 FBtr0087393 3 1 2 152 2R 11185420 11185495 GGATCATGAAGCAGTGGGA 59 11185286 11185310 GAAGGATACCTTCTATCAGTTTGTG 59 NA Drosophila melanogaster 61 chn FBgn0015371 FBtr0111007,FBtr0111006,FBtr0087415,FBtr0087416 3 4 4 111 2R 11025933 11026024 ACAAATCTGCAACAACTCGA 58 11026098 11026116 GCTGGATTACATTGGCCTG 59 NA Drosophila melanogaster 61 CG12868 FBgn0033945 FBtr0301735 2 1 1 101 2R 10492605 10492686 CTGATAAGAACACGGAAGGAG 58 10492524 10492542 TGAGTTTGGGTGTTTCAGC 58 NA Drosophila melanogaster 61 CG17388 FBgn0033937 FBtr0087489 1 1 1 116 2R 10330047 10330065 GTTGTTGCATCTGATGCTG 57 10330439 10330518 CATTCCACAGTGTCCACTG 58 NA Nonspecific Drosophila melanogaster 61 Obp50e FBgn0033931 FBtr0087556 3 1 1 89 2R 10262497 10262575 ATGCTCATCTGTGCTATCCT 58 10262427 10262448 AGTACTGCTTAACTCTGTTCAC 58 NA Drosophila melanogaster 61 CG8617 FBgn0033925 FBtr0087561 3 1 1 194 2R 10244658 10244676 GACAGCCAGTACATGGAGG 59 10244297 10244315 CATTGTGTAGCAACGCTGG 59 NA DesignNoJunction Drosophila melanogaster 61 CG18327 FBgn0033904 FBtr0087522 2 1 1 89 2R 10054979 10054998 GAGATCTCATTCGCAAAGGG 58 10055049 10055177 CGTCTTGATCAGGAAGAAGG 58 NA Drosophila melanogaster 61 Cpr50Cb FBgn0033869 FBtr0087630 1 1 1 110 2R 9682703 9691141 TCCTGCTTAGCTTATCCCTC 58 9691214 9691232 GTTCCGAGTAGTCGTAGCC 59 NA Drosophila melanogaster 61 CG42319 FBgn0259219 FBtr0299738,FBtr0299736,FBtr0299739,FBtr0299737 3 4 6 143 2R 9151121 9151139 AGGTGGTCATTGAGCTCAG 59 9151379 9151398 TGTTCTCAATGGTGTTCGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Spt-I FBgn0086532 FBtr0087731,FBtr0087729,FBtr0087730 3 3 3 90 2R 9057262 9057280 TTGTTCATCGACGAAAGCA 58 9057334 9057407 CGACTTCATCACGATCGAC 58 NA Drosophila melanogaster 61 CG13323 FBgn0033788 FBtr0087797 1 1 1 62 2R 8934618 8934636 ACAACGACTACCTGCTGTC 59 8934574 8934594 TCCAGTAGTTGTTCTTGATCG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG33798 FBgn0053798 FBtr0091802 1 1 1 81 2R 8881825 8881847 CGTTACTAAGTTCATCTTCGGTG 59 8881883 8881977 CATAATTATGTCATGGTCGTAGGG 59 NA Drosophila melanogaster 61 CG30055 FBgn0050055 FBtr0087827 3 1 1 142 2R 8477714 8477735 CGAAAGTTCAAAGTTCACATGC 59 8477837 8477955 TCCATGACAGATCTTCCTGC 59 NA InUTR Drosophila melanogaster 61 CG8594 FBgn0033755 FBtr0087826 1 1 1 80 2R 8462330 8462406 TCCATCAATCAAGAGTGTTCG 58 8462445 8462466 GGTGATGGATTCATAAACATGG 57 NA Drosophila melanogaster 61 stil FBgn0003527 FBtr0087825 1 1 1 92 2R 8458137 8458231 ATGCACATCAAGAGACGTC 58 8458287 8458305 TTTCATGATCCGATCACGG 57 NA Drosophila melanogaster 61 dgt5 FBgn0033740 FBtr0087948 3 1 1 99 2R 8355064 8355148 CAAGACCAAGAACATTCAAACC 58 8354986 8355004 CTTATTCAGCGACTCCAGC 58 NA Drosophila melanogaster 61 RpS11 FBgn0033699 FBtr0088007,FBtr0088006 3 2 2 89 2R 8087084 8087348 CTGTGTTCAGAGATGTTGAGC 59 8087015 8087033 CTTTCAGGACGTTGAAGCG 59 NA Drosophila melanogaster 61 CG34232 FBgn0085261 FBtr0112426,FBtr0112425 2 2 2 63 2R 8052823 8052843 TGATAGTCTGAAACATGGTGG 57 8052780 8052798 CTTTCGCTCAGAGTGATGC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8889 FBgn0259985 FBtr0088026,FBtr0088025,FBtr0088024 3 3 3 87 2R 7914604 7914622 CTGCTGGTCTTCTTCAACG 58 7914479 7914555 GCGTGCAATTATCTAGTTTGC 58 NA Drosophila melanogaster 61 CG8290 FBgn0026573 FBtr0088041 2 1 2 81 2R 7861947 7861968 GAATTCAACAGTATTGACGAGC 58 7862010 7862110 ACTCGCAAGCATAATTGGG 58 NA Drosophila melanogaster 61 CG13188 FBgn0033668 FBtr0088039,FBtr0088040 3 2 2 81 2R 7837687 7843102 TATACAAGGAGCACATTCAGG 57 7843145 7843163 TCGAAGACGATCACTTTGG 57 NA Drosophila melanogaster 61 CG42531 FBgn0260436 FBtr0300859 1 1 1 80 2R 7751948 7752033 GGAGCTTTAATCAGATCAACTG 57 7752071 7752092 GTACACAAACAGGATCATACAG 57 NA Drosophila melanogaster 61 pyr FBgn0033649 FBtr0113070 3 1 1 188 2R 7600635 7608545 TGTTCCACAAGTTCATGCC 58 7610267 7611425 TGAAGTATTGATATGTCCGCAG 58 NA Drosophila melanogaster 61 CG42336 FBgn0259238 FBtr0299856 3 1 4 80 2R 7182286 7183015 CATACTCATTGTCTTTGCTCTC 57 7182227 7182246 AGTTTCTCCTGCTTCTTGAG 57 NA Nonspecific Drosophila melanogaster 61 TpnC47D FBgn0010423 FBtr0088184 2 1 1 81 2R 7162328 7162404 GATGAGGACAAATCCGGTC 58 7162265 7162284 CCTCATCATCCTCCTCTACG 58 NA Drosophila melanogaster 61 RpS15Ab FBgn0033555 FBtr0088226 2 1 1 114 2R 6709307 6709325 CAAATCCAGCTATGGTGCG 59 6709403 6709421 ATGATCACCTTGGAGCAGG 59 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG1407 FBgn0033474 FBtr0088436,FBtr0300719,FBtr0088435 2 3 3 80 2R 5919619 5919726 CAGATCAATGGAGGATACCG 57 5919558 5919577 TAAGAATGCGTTTCTGGGTG 58 NA Drosophila melanogaster 61 Prosalpha7 FBgn0023175 FBtr0089998 2 1 1 125 2R 5734397 5734587 CTGGTGAAATCATCTACAAAGTCC 59 5734295 5734314 CCTTCTCCGTCAGTTCTGAG 59 NA Drosophila melanogaster 61 CG33800 FBgn0053800 FBtr0091804 3 1 1 213 2R 5636338 5636412 CTTTCAATCGCCCATTCGG 59 5636589 5636607 ACTCTCCGTCTTTGAGTGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG12926 FBgn0033437 FBtr0088502 1 1 1 90 2R 5496230 5496248 CTTTGTAAATGCGCCCTCC 59 5496097 5496179 GTGTATATGAAACCGTTTCCGA 58 NA Drosophila melanogaster 61 CG30343 FBgn0050343 FBtr0088594 3 1 1 154 2R 5139744 5139762 ACTTCACAACTGTAAGCCC 57 5139879 5139898 ATAGTTGGGTTGGAATTCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13743 FBgn0033368 FBtr0088662 2 1 1 86 2R 4938126 4938357 CATCCTGATGGTCAGATGC 58 4938058 4938076 TAATAGCCGTACTTGCCGT 58 NA Drosophila melanogaster 61 sns FBgn0024189 FBtr0111043,FBtr0088635 3 2 2 82 2R 4718011 4718029 TCATCTGTGACTCGAGCTC 58 4718072 4718388 GTTATTAATGCCTTCGATGGGT 59 NA Drosophila melanogaster 61 CG2127 FBgn0033286 FBtr0088766,FBtr0088765 2 2 2 60 2R 4257224 4257242 TACAGCAGTCAGTCTTCCG 59 4257182 4257201 TCGATACCTGATCGCAATCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 pnut FBgn0013726 FBtr0088793,FBtr0088792 1 2 2 60 2R 4126151 4126169 GCGTCAATCTGACACTCAC 59 4126193 4126211 CTGTTGTCAACGGCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30372 FBgn0050372 FBtr0100140,FBtr0300954 2 2 2 80 2R 4005961 4005979 TAAATCTGCTCACCTGCCA 59 4005814 4005918 GATACGGACGATTGTAGCTG 58 NA Drosophila melanogaster 61 CG30381 FBgn0050381 FBtr0088885,FBtr0113374 1 2 2 60 2R 3817780 3817798 CGATAAGCTGTACTGCCTG 58 3817738 3817758 ATCCTTGATATGGTTCTCGTC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Kdm4A FBgn0033233 FBtr0088886 1 1 1 90 2R 3812037 3812120 TTGCCAAGTAGTCACTGGG 59 3811965 3811983 CTTCTCCATGAATTGGCGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG30383 FBgn0050383 FBtr0088897 1 1 1 94 2R 3711951 3712204 AGATTAAGAAAGGCGATTCCC 58 3711877 3711895 TTTGCTTCGATACCCAACG 58 NA Drosophila melanogaster 61 CG18812 FBgn0042135 FBtr0088936,FBtr0088935 3 2 3 154 2R 3613395 3613413 GCCTGAATTCGTACAGCAG 59 3607489 3613199 TAGGCGCTCGTATCTTTCC 59 NA Drosophila melanogaster 61 CG30503 FBgn0050503 FBtr0299802,FBtr0089003 1 2 2 80 2R 3331901 3331920 ACTGTGAGGAGAAGATTCCG 59 3331777 3331858 AGGCACACGAGAATATGGG 59 NA Nonspecific Drosophila melanogaster 61 pwn FBgn0003174 FBtr0088962 1 1 1 80 2R 3186011 3186149 ATAAGAGCGCTGGACTCTG 59 3186192 3186211 CCGGTAGATGTTGTTCACCT 59 NA Drosophila melanogaster 61 Tsp42Eo FBgn0033136 FBtr0089035 1 1 1 80 2R 2943272 2943353 ATGGTGGTGAACTTGATTCTG 58 2943392 2943413 CTGTTTGGTCTCATTGTAGTGG 59 NA Drosophila melanogaster 61 CG15237 FBgn0033104 FBtr0086212 3 1 1 99 2R 2697141 2697159 CAATCGCTACTGGTTGGAC 58 2697002 2697078 CTTAAGGGACTCTCGCCAG 59 NA Drosophila melanogaster 61 CG3194 FBgn0033087 FBtr0302190,FBtr0086145 3 2 2 81 2R 2558899 2559028 TGGACAAGTTCTACTGGTACG 59 2558838 2558859 CCCAGCAGTGAATAGATAAAGC 59 NA Drosophila melanogaster 61 CG30432 FBgn0050432 FBtr0086002 3 1 1 60 2R 2085526 2085546 CGGAATCTTGGGATAAAGGAC 58 2085486 2085505 ACGTATAGGATGACGACGTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 SCAP FBgn0033052 FBtr0086027 2 1 1 80 2R 1920221 1922758 TTCTGCTTTCGTGCTATCC 58 1920159 1920178 CAGTTTCGTAGGGTACAACG 58 NA Drosophila melanogaster 61 CG14464 FBgn0033000 FBtr0299923 1 1 1 108 2R 716987 717058 GTCTGGACATATGCGACTG 58 717130 717148 AACTTTCGATTCGAGCGAC 58 NA Drosophila melanogaster 61 snRNA:U4:38AB FBgn0003931 FBtr0081292 2 1 1 70 2L 19810774 19810792 CTGAGGTGCGATTATTGCT 58 19810826 19810844 GTGGACGGTATTTCACGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31601 FBgn0051601 FBtr0085947 1 1 1 89 2L 22042165 22042183 AAATTTGAACAGGCTGGGC 59 22041652 22042112 TAGGTATCCTTAGCTGGCG 58 NA Drosophila melanogaster 61 CG41434 FBgn0084001 FBtr0111262 2 1 1 60 2L 22038623 22038642 AGGGCTAATTTGACGAAGGA 59 22038663 22038683 CCGTGGAAACCGTAAATAAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His1:CG33861 FBgn0053861 FBtr0091865 1 1 1 60 2L 21531517 21531536 AGTTGAGAAGAAAGTGGTCC 57 21531559 21531577 TTTCTTTGCCTTTGTGCCA 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His3:CG33854 FBgn0053854 FBtr0091858 1 1 1 60 2L 21520390 21520408 CGCTCAGGACTTTAAGACG 58 21520432 21520450 TTCCTGCAGAGCCATAACC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9338 FBgn0032899 FBtr0081428 1 1 1 121 2L 20865474 20865492 AAGTCAGACAGTAGCCTCG 58 20865577 20866945 TTACCGGGAATGTCGATGG 59 NA Drosophila melanogaster 61 CG16798 FBgn0032856 FBtr0081371 2 1 1 81 2L 20377584 20377812 CGAGAATGAAGCCGTTCTG 59 20377521 20377544 GATGATTATCACAGATAGCGAGAC 59 NA Drosophila melanogaster 61 CG40341 FBgn0259996 FBtr0302056 1 1 1 195 2L 20248239 20248258 CAACAGACAAGAACAACGAC 57 20248416 20248514 AAGTCAGTAAGCGACTTGG 57 NA Drosophila melanogaster 61 CG10463 FBgn0032819 FBtr0081290 1 1 1 181 2L 19759332 19759350 CAAGGGAGAAGATTTGGGC 58 19759494 19759591 CTTGGAGTTCTGAACTGACG 58 NA Drosophila melanogaster 61 CG10702 FBgn0032752 FBtr0081175,FBtr0081176,FBtr0081174 2 3 3 86 2L 19067506 19067579 AAGGACAAGTACGTCATGGA 58 19067439 19067459 TGATCCGGAAATAACATAGCC 58 NA Drosophila melanogaster 61 CG31793 FBgn0051793 FBtr0081138 3 1 1 81 2L 19006224 19006246 GTCCTGATAATGCTGTGTATTGG 59 19006284 19006364 CTGTGTTCTTAACCCAGTAGGA 59 NA Drosophila melanogaster 61 Faf FBgn0025608 FBtr0081126 3 1 1 80 2L 18706845 18706864 CAGTTGTATTCAAGCTGCCC 59 18706727 18706803 AGTGATAAACGTCAAGCACC 58 NA Nonspecific Drosophila melanogaster 61 Faf FBgn0025608 FBtr0081126 2 1 1 72 2L 18706841 18706859 GTATTCAAGCTGCCCAGTG 58 18706730 18706805 GATAAACGTCAAGCACCGA 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 rdo FBgn0243486 FBtr0081029 3 1 1 80 2L 18062492 18062510 CATCACCGACTCCAATCTG 58 18062552 18063814 TTGGACAGATCTAATATCCGC 57 NA Drosophila melanogaster 61 CG31740 FBgn0051740 FBtr0081028 2 1 1 126 2L 18009065 18009084 CAACGTATTTCTTCAGCAGG 57 18009309 18009327 CAGCAAAGCATCAGAACCA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG42659 FBgn0261531 FBtr0302514 1 1 1 80 2L 18007486 18007559 CATTTCCGACTTCTTTCGAG 57 18007599 18007620 CCAATGTAGAAAGGGTTTATGG 57 NA Drosophila melanogaster 61 CG5043 FBgn0032636 FBtr0080980 3 1 1 97 2L 17434049 17434070 AGAACCCTTTACTCCAAATCAC 58 17434125 17434209 TTGTCTACTGAGGCATTATCCT 58 NA Drosophila melanogaster 61 CLIP-190 FBgn0020503 FBtr0290263,FBtr0080976,FBtr0290261,FBtr0301440,FBtr0290262,FBtr0080975,FBtr0301441,FBtr0301442,FBtr0290265,FBtr0080977 3 10 10 139 2L 17400816 17400899 GCATTGGAGGCAAGAATGG 59 17401002 17401020 CTCATCCAATTCCACACCG 58 NA Drosophila melanogaster 61 CG13278 FBgn0032602 FBtr0080933 1 1 1 80 2L 16758785 16758805 GAAAGGCCTTTAATCAACCAG 57 16758668 16758746 GCTCTTCAATCATCGATATCAG 57 NA Drosophila melanogaster 61 CG34168 FBgn0085197 FBtr0112359 3 1 1 79 2L 16135190 16135212 CGACTACCAAATTTCTAGGACTG 59 16135066 16135084 GAGCACATTCCTGGATTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13243 FBgn0028903 FBtr0080787 1 1 1 89 2L 15852692 15852764 AAAGAATGGATGCTCAAGGAG 58 15852815 15852833 TGTTTGGATCGCGAAACTG 59 NA InUTR Drosophila melanogaster 61 l(2)35Di FBgn0001989 FBtr0080771 2 1 2 86 2L 15749843 15750559 CAACCAGAATGACTGGACC 58 15749775 15749793 TTGGGATAGCCCTCATCTC 58 NA Drosophila melanogaster 61 CG4650 FBgn0032549 FBtr0301695 2 1 1 114 2L 14774822 14774843 TGGCTTATCTACATACTTCGGA 58 14774616 14774693 CGAGCTACTAATTGTTCGCTG 59 NA Drosophila melanogaster 61 CG42587 FBgn0260955 FBtr0301742 1 1 1 152 2L 14745168 14745186 GATGGACCTTAAGTGCTGC 58 14744947 14744965 AGTTAGTTCACTGCTCCGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 l(2)34Fd FBgn0261535 FBtr0080639 3 1 1 91 2L 14353624 14353704 ATGCACGGATACTTTATGGAC 58 14353553 14353572 ATCTTATCTTTGCGGAAGCG 58 NA Drosophila melanogaster 61 CG32971 FBgn0052971 FBtr0114463,FBtr0114462 2 2 3 107 2L 14274843 14274863 CGAAAGAATCAAGTTGGTTGC 58 14274929 14277322 TTGAATTCCACTGAGATTGGTC 58 NA InUTR Drosophila melanogaster 61 CG16885 FBgn0032538 FBtr0080559,FBtr0080558 3 2 2 219 2L 13934650 13934668 GGTTGAGACATACAAGCCC 58 13933648 13933666 GATGGTCCGTATCCGTAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6116 FBgn0032499 FBtr0080460 3 1 1 82 2L 13289080 13289183 TCAACTCAACGCATTTGCC 59 13289227 13289247 GAATAGTTATGCTCCAGTCGC 59 NA Drosophila melanogaster 61 CG31849 FBgn0051849 FBtr0080490 2 1 1 60 2L 13181645 13181664 CTATACGCTACTACGCTGCT 59 13181604 13181622 GTGACTGTAGGCCATTGAG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5287 FBgn0032477 FBtr0080436 1 1 1 80 2L 13180029 13180050 TAAACTATAACTCCACGACGGT 59 13180088 13180169 ACAAGGCACCTATATTCAAGGA 59 NA Drosophila melanogaster 61 A16 FBgn0028965 FBtr0080427 2 1 1 88 2L 13020290 13020308 GACGAGGACTTCTTCAGAC 57 13019916 13020238 AGGAATTCAACCTTTCCCG 57 NA Drosophila melanogaster 61 Vha68-1 FBgn0020368 FBtr0080429 2 1 1 66 2L 13001499 13001572 AATGAAGTTCAAGGACCCG 57 13001451 13001469 GTACAGCTGGTCGTAGTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG5787 FBgn0032454 FBtr0080405 2 1 1 88 2L 12710423 12710441 GAAAGGTGGACCACAAGGA 59 12710217 12710373 GCTTCTGACTAATTTGGACGG 59 NA Drosophila melanogaster 61 bun FBgn0259176 FBtr0300524,FBtr0299652 1 2 8 89 2L 12477158 12491701 CTGAAGTTGATAATGCATCTGG 57 12458199 12458217 TCATGAGATGCGACTTGAC 57 NA Drosophila melanogaster 61 Gr33a FBgn0032416 FBtr0080337 1 1 1 88 2L 12139080 12139098 GATTTGGACACCAGCAACG 59 12139150 12139654 GCTTCCGATGTGTTTCCAG 59 NA Drosophila melanogaster 61 Mt2 FBgn0028707 FBtr0080329,FBtr0110911 3 2 2 60 2L 12097289 12097311 CTGGTCATGGACATAATACATCC 58 12097330 12097349 TGTAGCCCTTTGTAAAGCAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG6792 FBgn0032401 FBtr0080305 3 1 1 187 2L 12048281 12048356 ACTTCAAGCTTAAGAACCCG 58 12048113 12048132 TAGGTGAGTGTCGTATTCCC 58 NA Drosophila melanogaster 61 CG34163 FBgn0085192 FBtr0112354 1 1 1 99 2L 11988299 11988321 GGAGATCTCCACATAAACAATGG 59 11988434 11988452 CAGTTTGAGCGAAACGGAC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG14935 FBgn0032382 FBtr0080277,FBtr0080276 2 2 2 96 2L 11852015 11852091 TTTAAGCGGTCCTATCCCA 58 11852150 11852169 GCTGGCTAAGAAACTCTGAG 58 NA Drosophila melanogaster 61 Sfp33A2 FBgn0259963 FBtr0300309 3 1 1 69 2L 11837770 11837789 ATTAGATTTGACCAACGCGT 58 11837817 11837839 CCATCCTCTATAGTTAGGTACAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12602 FBgn0032373 FBtr0080255 1 1 1 80 2L 11743938 11743956 CTCACAGTCGGTATCCTGG 59 11744000 11744080 CATGAACTCAACCCAGTGC 59 NA Drosophila melanogaster 61 CG4751 FBgn0032348 FBtr0080200 2 1 1 81 2L 11131613 11131684 GTGAACTGGATGCTGAACG 59 11131727 11131747 TTCGAAACGGTATTATGTGCG 59 NA Drosophila melanogaster 61 CG14072 FBgn0032318 FBtr0080145 2 1 1 80 2L 10937387 10937406 GGATGGTCTACAATATGCGG 58 10937448 10937525 GAGAGTTGAGACACATTCGA 57 NA Drosophila melanogaster 61 CG17085 FBgn0032309 FBtr0080141 1 1 1 60 2L 10851677 10851697 ACCATATTGAGGTTAGTTCGC 58 10851719 10851737 ATGTACCCAGCACCATCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34160 FBgn0250826 FBtr0112351 1 1 1 107 2L 10579914 10580007 AACAAGGCATCCTCTTCCC 59 10580072 10580096 GCACAATAATCGTCTATAGAGAAGC 59 NA Drosophila melanogaster 61 CG7456 FBgn0032258 FBtr0080038 3 1 1 80 2L 10487109 10487129 ATCATGAAGAACTCCGATCTG 57 10486989 10487070 CTCCATGAAATATCTTTCCAGC 57 NA Drosophila melanogaster 61 CG5056 FBgn0032231 FBtr0080003 2 1 1 60 2L 10366933 10366952 CGTATCGTCAAGAGTGTGAG 58 10366973 10366993 ATGGATCGAATCCGTTATCTG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Sps2 FBgn0032224 FBtr0079998,FBtr0079997 2 2 2 89 2L 10343346 10343423 AATAATACTACCGTCAAACGCG 59 10343473 10343491 CAAAGGTGAGCATCCATCG 59 NA Drosophila melanogaster 61 CG4953 FBgn0032204 FBtr0079984 2 1 1 88 2L 10266841 10266919 TGGCACTCAAAGTTATGCG 58 10266971 10266989 TCTCTGGACCAAATCCGTG 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089905,FBtr0089902,FBtr0089901,FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 1 7 7 83 2L 10259082 10259101 GTTGATATGTGGCTCAAGGA 57 10258905 10259036 GATCATGGTACCGGTTCTG 57 NA Drosophila melanogaster 61 Ror FBgn0010407 FBtr0079978 3 1 1 81 2L 10254098 10254199 CAGCTCAGATTATTATCGAGTTCAG 59 10254232 10254256 CTTTCCATACAATATCGATTCCGAG 59 NA Drosophila melanogaster 61 CG31717 FBgn0051717 FBtr0079977 1 1 1 91 2L 10250819 10250905 ATGAGGACGTCATCACCAG 59 10250960 10250978 AACGACAGATTGGAGACGG 59 NA InUTR Drosophila melanogaster 61 CG5694 FBgn0032197 FBtr0079954,FBtr0079953 1 2 2 80 2L 10229119 10229196 GAAGCTATACTCGAACACGA 57 10229058 10229076 TTTGTTATCTGGCTCAGGG 57 NA Drosophila melanogaster 61 RpL7 FBgn0005593 FBtr0079946 1 1 1 65 2L 10201528 10201616 GTATCAACAAGGTGGCTCC 58 10201645 10201663 TGTTGATCTGCCTCAGACG 59 NA DesignNoJunction Drosophila melanogaster 61 Ripalpha FBgn0032189 FBtr0079962 1 1 1 115 2L 10200226 10200298 TCCAATTGTCCGAACTCAG 57 10200129 10200147 ATACCACTCGTTGACATCG 57 NA Drosophila melanogaster 61 CG5885 FBgn0025700 FBtr0079900 3 1 1 139 2L 9918044 9918062 AGAAAGTCCAGTCCTCTGG 58 9917857 9917941 CCAGAAGAGCCAGATTGGA 59 NA Drosophila melanogaster 61 CG13121 FBgn0032145 FBtr0079922 2 1 1 110 2L 9770966 9770984 GAGGAGTCCTACTATCGGC 58 9770596 9770894 CCAGATAGCTTTGGCATATCG 59 NA Drosophila melanogaster 61 CG31882 FBgn0051882 FBtr0079853 3 1 1 62 2L 9624986 9625006 CCAATCAATCCACTGACTCTG 58 9624944 9624962 GGTACTGGTTGCCTAGCTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9568 FBgn0032087 FBtr0079765 3 1 1 83 2L 9010892 9010910 CATAGTAATGTGCCCACCG 58 9010957 9011046 GTGAGTGTAGTTTGCTGCA 58 NA Drosophila melanogaster 61 CG12438 FBgn0032065 FBtr0079732 2 1 1 60 2L 8752951 8752971 CTACATCAGCTTCGAGTACCT 59 8752993 8753011 ATAGAGCACTATGGCGACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG13398 FBgn0032042 FBtr0079710 3 1 1 175 2L 8415049 8415068 CACTGGGTAGCTGATTTCAG 58 8414821 8414839 AACACATTCTCATGACCGC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 1 1 1 133 2L 8308605 8308695 AAACTTTGGGCTTGTCGAG 58 8308792 8308810 TTTCTTGGAGGAAGAGGCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG8292 FBgn0032004 FBtr0079632 1 1 1 80 2L 8217613 8217694 TGTGGCAGTATAACGATCCC 59 8217552 8217576 CCTCCTCAAATGGTTTCATATACTG 59 NA Drosophila melanogaster 61 Mcr FBgn0020240 FBtr0079543 1 1 1 80 2L 8079816 8079834 GGGATTTGACAATCCCGTC 58 8079659 8079772 TTTGATTGACGCGATAGCC 58 NA Drosophila melanogaster 61 CG7203 FBgn0031942 FBtr0290272 3 1 1 67 2L 7753127 7753146 AGTTTCGTTTCAAGCGTCAC 59 7752792 7752810 AACAGGACTACGACAACGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG13786 FBgn0031900 FBtr0079409 2 1 1 81 2L 7251490 7251508 TTGTGAGGACACCGAAGAG 59 7251355 7251447 AGGTGGTATTGGACTTGATGG 59 NA Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0110799 1 1 2 80 2L 7209396 7209415 GCCTCTATATCCACAGAAGC 57 7208568 7209355 TTTGAAGTCCAGGTCATTGAG 58 NA Drosophila melanogaster 61 CG13773 FBgn0042092 FBtr0079372 2 1 1 155 2L 6907358 6907377 CCATACGTTTCACAAACCAG 57 6907124 6907241 TGGATTTGTTCTTTGGAGCT 57 NA Drosophila melanogaster 61 nrv1 FBgn0015776 FBtr0079384 1 1 1 80 2L 6786323 6786346 CTTCTCGGAAATGATCTACAATCC 59 6780274 6786284 AACAGCAGTAGCTGACTCC 59 NA Drosophila melanogaster 61 CG31638 FBgn0051638 FBtr0079262,FBtr0113411 1 2 2 123 2L 6491594 6491688 AGAAGTGGAGTAAGGTCCG 58 6491775 6491793 TCGAGATCGTTCTTCTCCC 58 NA Drosophila melanogaster 61 CG42370 FBgn0259716 FBtr0299969 3 1 1 60 2L 6383794 6383812 CATTGCTGGACTGGATCTG 58 6383752 6383770 TAGACTCATTTGCGAGCTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9507 FBgn0031808 FBtr0079255 2 1 1 60 2L 6381673 6381692 CAGATGCGACTCTACTACCG 59 6381713 6381733 GGTACTTCTTGAGGTTGTACG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG9486 FBgn0031791 FBtr0079243 2 1 1 60 2L 6256175 6256196 GGACAAGATACACAAGTTTCTG 57 6256215 6256235 GTAGTGCTTGAAGATATTGGC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Lam FBgn0002525 FBtr0079100 1 1 1 80 2L 5544729 5544813 TATGGACATCAAGGTCTCCC 58 5544856 5544874 ATGTTCAAACGAGCCTCCT 59 NA Drosophila melanogaster 61 CG7382 FBgn0031708 FBtr0079130 1 1 1 80 2L 5519256 5519274 CGGATGCAGTTCTATGTGC 59 5519139 5519214 CAGTTTACCAGAGTCACTCCT 59 NA Drosophila melanogaster 61 tkv FBgn0003716 FBtr0079089,FBtr0079087,FBtr0079088,FBtr0079086 2 4 4 78 2L 5221390 5221471 TTTCTCATGTGCAAGGTAGC 58 5221331 5221349 TGCAGAAGTCCTCCTTGTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG14034 FBgn0250847 FBtr0110802 2 1 1 80 2L 5215639 5215721 CGGACCCATTAATAAGATGGA 57 5215579 5215597 GGTGACGAAATAGACTCGG 57 NA Drosophila melanogaster 61 CG34351 FBgn0085380 FBtr0112561 2 1 1 81 2L 4717790 4717809 TGTTCCTACGTGAACTTGTG 58 4717852 4719814 GCTCGGTTCTCATAATAGCC 58 NA Drosophila melanogaster 61 Gs1l FBgn0019982 FBtr0077453 2 1 2 166 2L 4456510 4456734 GCAGATTACGTTTAGGAAACGA 59 4456312 4456331 CAGTATAAAGGCGTTCGGTG 59 NA InUTR Drosophila melanogaster 61 Dim1 FBgn0031601 FBtr0077435 1 1 1 80 2L 4403343 4403363 TATATGCTCCCTCATTTGCAC 58 4403403 4403522 ACGTATTACAACTACTCGGTC 57 NA Drosophila melanogaster 61 RpL40 FBgn0003941 FBtr0077470 2 1 1 103 2L 4227733 4228013 GTTGCACGTTTCCTCTGTG 59 4228079 4228098 TTCTCGATGGTGTCAGAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG31960 FBgn0051960 FBtr0077494 3 1 1 60 2L 3785172 3785193 TTCAGTCCATGATAAACGAGGT 59 3785214 3785232 AACTCCTCCTTTGCAATGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3604 FBgn0031562 FBtr0077545 3 1 1 60 2L 3697556 3697574 TCTGTTCTATCGCTACGCC 59 3697514 3697532 ACCGTAAACGAACTCCTCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG8853 FBgn0031550 FBtr0077529 1 1 1 93 2L 3531117 3531135 TCGGAAAGGATATGGAGCG 59 3531192 3531264 ACTGGGACATCAATCTCCC 58 NA Drosophila melanogaster 61 CG42460 FBgn0259950 FBtr0300294 2 1 1 115 2L 3388408 3388429 AAGTACTCCTGCTGAATAAGAC 57 3388252 3388332 ATTTAACTCCGCAGACAGG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG15408 FBgn0031523 FBtr0077587 3 1 1 95 2L 3333389 3333407 TACGTGGGAAGACTGTTGG 59 3333465 3333649 TCCTCTGATGTTGGCATCTG 59 NA Drosophila melanogaster 61 CG3104 FBgn0031473 FBtr0077687,FBtr0077686 1 2 2 154 2L 2850267 2850342 ACATGAAGGATCGAGCCAC 59 2850131 2850149 GTGATCCTGTCCCATCTGG 59 NA Drosophila melanogaster 61 daw FBgn0031461 FBtr0077720,FBtr0077721 1 2 2 80 2L 2810580 2810602 CAGAAGGACTCCAAGTATTTGTC 59 2810639 2811165 GATCTTCATCCACTCATCTTGC 59 NA Drosophila melanogaster 61 CG34174 FBgn0085203 FBtr0112365 1 1 1 95 2L 2214876 2215023 AAGTTGCCGGTAACATTGC 59 2215082 2215100 GGACATAGGAGTCCACGTG 59 NA Drosophila melanogaster 61 Gr22c FBgn0045499 FBtr0077899 2 1 1 108 2L 1790757 1790832 AGAGAAGTGTGAACGAATTCG 58 1790669 1790689 GTGATGATCATCTGGAAACCC 58 NA Drosophila melanogaster 61 CG5556 FBgn0031332 FBtr0077948 3 1 1 62 2L 1352719 1352741 GGGTATTAGCTATTGCATCTTCG 59 1352623 1352698 TTATAGACATGACGCGTGTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG5397 FBgn0031327 FBtr0077920 1 1 1 72 2L 1240946 1240967 GGAAATCGTCAATTGCTTAAGG 58 1241077 1241098 CTCCGTTTGAACTTTATCATCG 57 NA DesignNoJunction Drosophila melanogaster 61 Plap FBgn0024314 FBtr0077980 3 1 1 187 2L 1169785 1169803 AAGATCAGGACACCAAGCA 59 1169550 1169634 AAGTACTCGTTCCCATGGG 59 NA InUTR Drosophila melanogaster 61 CG9941 FBgn0030514 FBtr0073843 1 1 1 65 X 13614370 13614454 CTAGGAACAGCGAACACGA 59 13614323 13614341 CACTGGTCATTGTCGAAGC 59 NA DesignNoJunction Drosophila melanogaster 61 pn FBgn0003116 FBtr0070389 1 1 1 150 X 2075325 2075346 CCTAACAAATGTGCTTTCTACG 58 2075525 2075543 AAGTCACACGATTCGTTGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG3339 FBgn0039510 FBtr0273193,FBtr0273192 3 2 2 80 3R 23130719 23130982 TATTCTGGAGCCTGCTCTG 58 23130657 23130678 ATTCTCGATATCTGATTCACGG 58 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084397,FBtr0084394,FBtr0084392,FBtr0084395,FBtr0084396,FBtr0084393,FBtr0084398 3 7 7 95 3R 19013666 19013684 AACTTAATCAGGACCGCGA 59 19013516 19013607 CCCGTAGGTACTGGAAGAC 58 NA Drosophila melanogaster 61 CG10311 FBgn0038420 FBtr0083324 2 1 1 83 3R 12177651 12177669 ATCGTCTTCTTCATCGACG 57 12176939 12177604 ATAGGTCATAATCGCGCAG 57 NA Drosophila melanogaster 61 CG17639 FBgn0038029 FBtr0114565,FBtr0082576 2 2 2 99 3R 8210529 8210937 CTCACGGACTACTATTTCCC 57 8210999 8211017 AGATTGTGTTTAGCCAGCC 58 NA Drosophila melanogaster 61 CG12817 FBgn0037798 FBtr0110952,FBtr0110953 1 2 3 125 3R 6050317 6050335 TCTGCATAGCCAGCTTCAG 59 6050150 6050228 CATCAATGCGATGCTCCTC 59 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 2 2 2 236 3R 5826877 5826895 CAACCAAATCCGTCCAGAC 58 5826601 5826677 TGTCTTTGAGTTTCTCGGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17919 FBgn0037433 FBtr0081711 1 1 1 133 3R 2169964 2170264 TGTTAAAGGTCACGTACAGC 58 2170360 2170378 ATCCGTCATAATGAGCGTG 57 NA Drosophila melanogaster 61 CG5895 FBgn0036560 FBtr0301003,FBtr0075437 2 2 2 101 3L 16029309 16029327 GTCAGGGATTACCTGGTGG 59 16029389 16029470 GGTGTTCATGTTCTTGTATCCA 58 NA Drosophila melanogaster 61 CG34243 FBgn0085272 FBtr0112437 1 1 1 121 3L 13776625 13779978 GAACATATTGCCAGTTGCG 57 13776522 13776541 CCTGCTATAGACTGCTTGTC 57 NA Drosophila melanogaster 61 CG5883 FBgn0036225 FBtr0076067 1 1 1 86 3L 11937809 11937896 GGACTTCCTAGTTCTTTGGTC 58 11937743 11937761 GGTGGCGTTTAAGTAACGC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6707 FBgn0036058 FBtr0076356,FBtr0076358,FBtr0076357 1 3 3 82 3L 9889481 9889564 ATGAGGCTACTCCCATTCG 59 9889417 9889438 GCTCTTGCAGATTAACAAACAG 58 NA Drosophila melanogaster 61 CG16936 FBgn0027590 FBtr0072436 3 1 1 85 2R 20655054 20655074 TATTATGCCACCCTAAGTCCC 59 20654932 20655009 TTAATTGGCCGTAGTTCAAGG 58 NA Drosophila melanogaster 61 wmd FBgn0034876 FBtr0113112 3 1 2 182 2R 19435391 19435517 GCTGACGATAGTGCATCAG 58 19435227 19435248 GTGCACTTAGTGAATAACTGAC 57 NA InUTR Drosophila melanogaster 61 CG42260 FBgn0259145 FBtr0299573,FBtr0299572,FBtr0299574 3 3 3 119 2R 18631899 18632030 AACACATGGGTACAGTCCC 59 18631798 18631816 GAAGTCGTTCGACTACGTG 58 NA Drosophila melanogaster 61 ari-2 FBgn0025186 FBtr0071774 1 1 1 80 2R 18101011 18102391 CTACTACAACACAGGCGAG 57 18102433 18102453 CACTCGTACTCAAAGTACTCC 57 NA Drosophila melanogaster 61 Gr58a FBgn0041239 FBtr0071728 2 1 1 63 2R 17868370 17868440 GACTTTCATTTGCAGCTGG 57 17868465 17868485 CCTTATACGTTGACGGATGAC 58 NA DesignRelaxed Drosophila melanogaster 61 IM1 FBgn0034329 FBtr0086662 3 1 1 118 2R 14271480 14271498 CCCAGTGCACTCAGTATCC 59 14271580 14271667 GACAGTGGAACAGCATTGG 59 NA InUTR Drosophila melanogaster 61 inaC FBgn0004784 FBtr0087047 3 1 1 80 2R 12788720 12788802 CCAATGATTAAACATCGCAAGG 58 12788843 12788861 GTCCGTTGGAGTTAAGTCC 57 NA Drosophila melanogaster 61 NaPi-T FBgn0016684 FBtr0087463 3 1 1 88 2R 10732648 10732666 AGAACTCTACGGACTTGGC 59 10732462 10732596 GTACGGAATATTCGCCCAG 58 NA Drosophila melanogaster 61 CG30376 FBgn0050376 FBtr0088800 1 1 1 60 2R 4151179 4151197 CATACAACTCCTACCGCAG 57 4151137 4151155 AAGATCATGTTGTGCCGGA 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30491 FBgn0050491 FBtr0088919 3 1 1 88 2R 3542931 3542951 CTATTTGCGTTTCTCAAGAGC 58 3542998 3543084 ATAAGATCCTTCACGAAGAAGG 57 NA Drosophila melanogaster 61 CG10481 FBgn0032827 FBtr0081311,FBtr0081312 3 2 2 86 2L 19891937 19892060 CTATCTTAGCCTGATAATGTTGCAG 59 19891875 19891896 AGATTCTTGTCGTACTTCTTGC 58 NA Drosophila melanogaster 61 CG7099 FBgn0032517 FBtr0080499 3 1 1 140 2L 13389112 13389205 GGATGAGCCGAATATTACCG 58 13389308 13389326 TTCTGGCGGTTAATTTGGC 59 NA Drosophila melanogaster 61 CG3841 FBgn0032131 FBtr0079836 1 1 1 151 2L 9590669 9590749 ATGCAAATGTGCACTTGGA 58 9590861 9590882 GATTTCCGTAGTATTGTCACCT 58 NA Drosophila melanogaster 61 CG13784 FBgn0031897 FBtr0110799 3 1 2 82 2L 7209394 7209414 CCTCTATATCCACAGAAGCGG 59 7208565 7209355 GTATTTGAAGTCCAGGTCATTGAG 59 NA Drosophila melanogaster 61 CG31643 FBgn0051643 FBtr0079182 3 1 1 83 2L 6039936 6040021 TCGCAAGAAGCTAAAGAATACG 59 6040064 6040083 CGAGAATTGAGATCGTTGCA 58 NA Drosophila melanogaster 61 Iris FBgn0031305 FBtr0077986 3 1 1 60 2L 1133592 1133611 CTTCAAGAACCCTTTCACGA 58 1133551 1133573 GATACGGCTTCATCATAATCAGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Spp FBgn0031260 FBtr0078080 2 1 1 109 2L 544260 544344 AAGCTGAAGAAGTCAACGG 58 544169 544187 TTGAAGAACAGGTACAGCC 57 NA Drosophila melanogaster 61 Gs1 FBgn0001142 FBtr0300568,FBtr0078114 2 2 3 187 2L 132078 132098 TCACAAGACTTCCAAACATCG 58 132247 132485 CATCTTGGTTCGTGCTCTG 58 NA InUTR Drosophila melanogaster 61 al FBgn0000061 FBtr0078053 1 1 1 80 2L 386560 386706 TTTAACCAATTCCAGAGGGCT 60 386747 386766 TTGAAATGAGCTCGAGGGAG 60 NA Drosophila melanogaster 61 CG15309 FBgn0030183 FBtr0071487 3 1 2 136 X 10101698 10102018 GTCACAAGAAAGAGGACCA 57 10101580 10101598 GGTAGATAGGCCTGAAACG 57 NA InUTR Drosophila melanogaster 61 CG9410 FBgn0033086 FBtr0086115 1 1 3 183 2R 2556719 2556844 ATTGAAACAAGTGGAGGACAC 58 2557046 2557064 CATACGGCACGAACTTGTG 59 NA Drosophila melanogaster 61 gprs FBgn0024232 FBtr0087109 1 1 1 80 2R 12532746 12532830 TGATAACAATCCGAACATCGAC 59 12532871 12532889 TTGGCCGGTATCTTATGGA 58 NA Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 1 2 2 80 3R 27608523 27608648 GATTGAAGATGAAGAGGAACACTG 59 27608683 27608705 CTAAGGTTGTATAGCACTTGAGC 59 NA Drosophila melanogaster 61 Mdr50 FBgn0010241 FBtr0087537 3 1 1 80 2R 10138720 10138741 ATGCTGCTTGCATGTATTATGG 59 10138776 10138869 CTTGGGATACTTTGAATACATCTCC 59 NA Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 1 2 2 141 2L 12094704 12094780 AAGGAAAGGTACCAGAAGCA 59 12094884 12094902 CGTAGTCTTGCAGTTTGCG 59 NA Drosophila melanogaster 61 CG31510 FBgn0051510 FBtr0084783 1 1 1 113 3R 20948365 20948383 GGAGAGGGATATCGAGCAC 59 20946856 20948288 AGATATTGAGATGCGGCGA 59 NA InUTR Drosophila melanogaster 61 CR32730 FBgn0047092 FBtr0071016 1 1 1 99 X 7041952 7041970 TTTGACCAGCTGACAAGCT 59 7040790 7041889 AGTTCAAGCAGTCTTGGGT 59 NA Drosophila melanogaster 61 stnA FBgn0016976 FBtr0301618,FBtr0301619 3 2 2 110 X 22396330 22396348 ATTTGAAGAGCAATCGGGC 58 22395758 22395776 TCCTCCGACACGTAAATCG 59 NA Nonspecific, DesignNoJunction Drosophila melanogaster 61 CG14230 FBgn0031062 FBtr0074787 2 1 1 68 X 19600130 19600210 CGATCCTCGTCTCAAGGAG 59 19600242 19600260 TATTCGGCATGGTCAACCA 59 NA DesignNoJunction Drosophila melanogaster 61 CG12991 FBgn0030847 FBtr0074448,FBtr0074449 2 2 2 82 X 17492216 17492311 GGGTGAGTGACAATTCGGA 59 17492355 17492375 GTTCTGTATTGTCATCGCCTC 59 NA Drosophila melanogaster 61 CG10598 FBgn0003057 FBtr0074400 2 1 1 63 X 17120077 17120095 CTACTCTGGCGGATATGCT 58 17120032 17120052 GTTAATGACCTTCACGATGAC 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 eas FBgn0000536 FBtr0074215,FBtr0074213,FBtr0074214,FBtr0074212,FBtr0074211 3 5 5 84 X 16178782 16179060 TCGACTACGTAGGCTATGC 58 16179106 16179126 TTCTTAGCTGCAGTCAATGAC 58 NA Drosophila melanogaster 61 CG15641 FBgn0030643 FBtr0074035 3 1 1 60 X 15362092 15362112 GATCTGTACGTCTTCAATCGC 59 15362134 15362152 AATTACCGTTGACGTGCTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Flo-2 FBgn0024753 FBtr0073952,FBtr0073950,FBtr0073953,FBtr0073954,FBtr0300435,FBtr0073951,FBtr0073949,FBtr0300434 3 8 8 130 X 14825230 14825249 AGCAGATCGAGATTGAGTCG 59 14825341 14825847 GATGGTCTGACATTGCTTGG 59 NA Drosophila melanogaster 61 CG5321 FBgn0030575 FBtr0290021 1 1 1 80 X 14574483 14574502 GTCGATTGGAACGACATTGG 59 14574544 14574634 CTCGTCCAAGCAAATGACTG 59 NA Drosophila melanogaster 61 CG32687 FBgn0052687 FBtr0071458 1 1 1 95 X 10377442 10377460 TGAAGAACCTCAAGTCGCT 59 10377264 10377383 GTAGGCTCAGCTCAGTCAG 59 NA Drosophila melanogaster 61 CG12643 FBgn0040942 FBtr0071481 2 1 1 60 X 10158968 10158986 CCACCCAGGTCAACATAGG 59 10158926 10158947 AAACAATAGCGATAGGATACCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CheA7a FBgn0029948 FBtr0071055 2 1 1 97 X 7272420 7272533 AGCAGAAGATTGTTCTCATGG 58 7272592 7272610 AATGAACTGACAGAACGGC 58 NA Drosophila melanogaster 61 Femcoat FBgn0041252 FBtr0070663 3 1 1 95 X 4136787 4136808 AAGACAATGCTGAGATTTGGAC 59 4136606 4136624 CTTGGGCAGCTTCAATAGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG4313 FBgn0025632 FBtr0070327,FBtr0100659 2 2 2 110 X 1948464 1948546 AAACCCATGGAAAGAACCCT 59 1948617 1948637 AGGATGCATTTGAGGTATTGC 59 NA Drosophila melanogaster 61 Roc1a FBgn0025638 FBtr0273184 1 1 2 117 X 541602 541622 CTGATGGTAACACTTCATCCT 57 541766 541784 AAGTCCATGATGTGGTTGC 58 NA DesignNoJunction Drosophila melanogaster 61 CR40766 FBgn0085773 FBtr0114223 1 1 1 147 U 8596276 8596294 GGTTCCACTTTCGTAACCT 57 8596405 8596423 CTTCCATGGTAGTACGGCT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Su(Ste):CR42426 FBgn0259857 FBtr0300154 3 1 1 93 U 7795356 7795374 TGATACACAGCCATGTTCG 58 7795281 7795299 TTACTTACTGTGGGTCGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG40204 FBgn0058204 FBtr0302255 2 1 1 63 U 497481 497501 AACTATCACAAGATCCTGTCG 57 497526 497544 TTCACAACGCTGTGAACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp9f3Psi FBgn0038034 FBtr0082602 3 1 1 154 3R 8224443 8224461 GCATGTTCCTACGGAAGAG 58 8223491 8223512 GAAGTCCTTTATGGTTATCTGC 57 NA DesignNoJunction Drosophila melanogaster 61 CstF-50 FBgn0039867 FBtr0085865 1 1 1 81 3R 27561718 27561736 CATCAACACCATTGCCGAG 59 27561601 27561677 AGATAGGAGGTACTTTCCATTCC 59 NA Drosophila melanogaster 61 mRpS18C FBgn0039765 FBtr0085625 2 1 1 60 3R 26250005 26250023 CTCTCCCAATTCCAATCGC 58 26250047 26250065 ATAATCCGGTGATGTGACG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31029 FBgn0051029 FBtr0085585 2 1 1 97 3R 25957432 25957512 CCGGATATAAACCACGGCT 59 25957353 25957374 CCCAGGGTGAAGATAATATCCT 58 NA Drosophila melanogaster 61 CG1646 FBgn0039600 FBtr0113299,FBtr0085323,FBtr0085324,FBtr0085325,FBtr0085322,FBtr0113301 1 6 6 80 3R 24639528 24639612 GACAATGAGTCTGATGCGG 58 24639654 24639674 CCAATATCCGTAGCAGTAAGG 58 NA Drosophila melanogaster 61 CG31058 FBgn0051058 FBtr0085198 2 1 1 60 3R 23474724 23474742 TTCTCCACAGGATTACCCA 57 23474682 23474703 CATGACATACTCTGACTTGGAC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG17191 FBgn0039473 FBtr0085152 2 1 1 82 3R 22845347 22845420 GTTGGCAACAGTAAGTGCTC 59 22845284 22845302 AACTGCCGTCTATCTGAGG 58 NA Drosophila melanogaster 61 CG18472 FBgn0039463 FBtr0085068 1 1 1 80 3R 22773841 22773862 GCTATTTCGCTATGAGGAACAG 59 22773902 22773981 TCAGTCCAATCCAGAATGGG 59 NA Drosophila melanogaster 61 TwdlO FBgn0039438 FBtr0085054 1 1 1 60 3R 22452358 22452376 CCCAGTACAACTACGGAGC 59 22452316 22452337 GAGTAACTGGGAACATTATCGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14546 FBgn0039395 FBtr0084984 2 1 1 92 3R 21747767 21747785 ACTGTCGAAGGACCTACAG 58 21747595 21747613 AAGCTCGCTTCACTCTGAG 59 NA DesignNoJunction Drosophila melanogaster 61 CG4956 FBgn0039370 FBtr0084920 1 1 1 60 3R 21603667 21603685 TATATTGGGCAACTGGTGG 57 21603625 21603646 CAGAACTAAGCTATCGACTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CHKov2 FBgn0039328 FBtr0084849 3 1 1 82 3R 21156089 21156157 GCTCGTTCTCATAAGCGAC 58 21156025 21156045 CAGATAACTCCAGAGGATCGT 58 NA Drosophila melanogaster 61 CG13826 FBgn0040590 FBtr0084391 3 1 1 83 3R 19048838 19052177 AGGTACCAAGCGTAGTTGAC 59 19048774 19048793 AGGCAGATCCTCTAAGTCGA 59 NA InUTR Drosophila melanogaster 61 hh FBgn0004644 FBtr0084404,FBtr0100506 1 2 2 120 3R 18955125 18958733 GTCAAGTCAGATTCGTCGA 57 18955023 18955042 AAACACGATCTCCGATAGAG 57 NA Drosophila melanogaster 61 CG6660 FBgn0039030 FBtr0084338 1 1 1 97 3R 18749491 18749509 ATCACACGGACAGATCACC 59 18749569 18749650 TATGAATACCGTGTCGAGCA 59 NA Drosophila melanogaster 61 Srp14 FBgn0038808 FBtr0273271 1 1 2 82 3R 16405907 16405982 ATTCGAACTTTATCCTGCGC 59 16406027 16406113 ATATCGCTTGAACGTCAGC 58 NA Drosophila melanogaster 61 CG4390 FBgn0038771 FBtr0083837 3 1 2 95 3R 15883079 15883164 AAACATGACGCTCGAACAG 58 15883002 15883020 GTCATGTCGCACTTCAAGG 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 RhoGAP92B FBgn0038747 FBtr0083821 2 1 1 98 3R 15737494 15737512 TACTTGACCCTGCAGAAGC 59 15737573 15738044 CTCCATGACTTCACTGTCGT 59 NA Drosophila melanogaster 61 CG3773 FBgn0038692 FBtr0083737 1 1 1 121 3R 15056142 15056216 AGAGTAAAGGAGGTTCGCA 58 15056301 15056319 TAGTTGCGGAAGGATTCCT 58 NA Drosophila melanogaster 61 snRNP-U1 FBgn0038667 FBtr0083720 3 1 1 60 3R 14808941 14808960 TATGCCTCCACTGATGAACC 59 14808900 14808920 CATGGGATTCATAATCGGTGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 cona FBgn0038612 FBtr0083624 1 1 1 88 3R 14212281 14212301 GAGAATTTGTTAACACCACCC 57 14212349 14212440 TTCGATTATCCCAATGAGGTC 57 NA Drosophila melanogaster 61 CG31360 FBgn0051360 FBtr0083480 2 1 1 82 3R 13511041 13511062 GGAGAATTTCACTATGAAAGGC 57 13511167 13511185 CCTTCAGGAAATTCGCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 mtSSB FBgn0010438 FBtr0083277,FBtr0100152 1 2 2 106 3R 12030245 12030623 AACTACAAATATGAGAACGGCG 59 12030160 12030180 CCCTTCTTCAAGTATTCCAGC 58 NA Drosophila melanogaster 61 CG6006 FBgn0063649 FBtr0113476,FBtr0113477 3 2 2 81 3R 11992976 11993670 AGACCATATTCGGTCTTTGG 57 11993714 11993732 GATACCAGACCAAGCAGAG 57 NA Drosophila melanogaster 61 Tm2 FBgn0004117 FBtr0083079 1 1 3 115 3R 11137899 11138125 GAATATCTTAGGACCAACTGCT 57 11138201 11138219 CTTCTCAAGCTTCATCGCT 58 NA InUTR Drosophila melanogaster 61 CycC FBgn0004597 FBtr0083010 2 1 1 84 3R 10715119 10715199 CTTACCAGATCGCTATAGCCT 59 10715055 10715074 TTCAATTCTGCGAACCACTG 59 NA Drosophila melanogaster 61 Hrb87F FBgn0004237 FBtr0082852,FBtr0082851,FBtr0300590 1 3 3 97 3R 9485362 9486071 TGGTGAAGAGATCACCGAG 58 9485283 9485301 TCTCGAAGTGAGCCTTCAG 59 NA Drosophila melanogaster 61 CG14369 FBgn0038159 FBtr0082789 2 1 1 60 3R 9418078 9418099 TATCCGTACAACTACTATGGCT 58 9418039 9418057 AGTAGCCACTGCCATAACC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG14383 FBgn0038102 FBtr0082724 1 1 1 60 3R 8814027 8814048 GAAACTATATGCTACTGCTCCT 57 8813988 8814007 GGATAACCCAACGATTTGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG31342 FBgn0051342 FBtr0113404,FBtr0113403 3 2 2 80 3R 8813015 8813033 ATGCTTACCGAGAATGGAG 57 8813075 8813171 CAAATTTAGGACTTGATCGGC 57 NA Drosophila melanogaster 61 GstD1 FBgn0001149 FBtr0100410,FBtr0082607 3 2 2 60 3R 8193869 8193887 AGTTCCTGAACACCTTCCT 58 8193827 8193845 GCTACGGTAAGGGAGTCAC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cyp313a5 FBgn0038005 FBtr0082619 1 1 1 82 3R 8058724 8058799 CATGCTTAGGTTGGAAACTCTC 59 8058663 8058686 GGTGGTACTCAGCATATAATTTCG 59 NA Drosophila melanogaster 61 CG14722 FBgn0037943 FBtr0082431 3 1 1 103 3R 7567862 7567883 GGACTTGCAATATTATGCACAC 58 7568022 7568040 TTCCGCTATTACTCCCACC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG5342 FBgn0037916 FBtr0301159 3 1 1 75 3R 7405287 7405307 CGATCAAAGAACAGCTTACCT 58 7405394 7405412 AACTGCCAGACTGTACTCG 59 NA DesignNoJunction Drosophila melanogaster 61 Syn FBgn0004575 FBtr0089476,FBtr0100472,FBtr0089477,FBtr0089475,FBtr0100471 3 5 5 90 3R 6041343 6042795 TGGATGAGATATCCGAGCT 57 6042847 6042867 GCGCTTATGATATACTCTCGT 57 NA Drosophila melanogaster 61 CG3925 FBgn0037780 FBtr0082174 1 1 1 85 3R 5875389 5875475 AAGTGAAGATGATTCCGATCTG 58 5875521 5875539 AGACCATCATGTCTACGGC 59 NA Drosophila melanogaster 61 CG9444 FBgn0037730 FBtr0082099 3 1 1 88 3R 5507627 5507706 CAGGAACGAATAAAGAATTCCC 57 5507560 5507579 AGTAATTCGCCCATCATGAG 57 NA Drosophila melanogaster 61 CG8319 FBgn0037722 FBtr0082077 2 1 1 107 3R 5453624 5453703 CACATGAAGGTTCACAGCA 58 5453774 5453792 GGTGGAATTGCTATTGCGA 58 NA Drosophila melanogaster 61 CG11737 FBgn0037592 FBtr0081869 2 1 1 80 3R 4346623 4346643 GGAATATTGGAACCCAAGAGC 59 4346685 4346763 AAACTTGCTCAGTCGATCG 58 NA Drosophila melanogaster 61 CG1091 FBgn0037470 FBtr0081640,FBtr0081641 2 2 2 81 3R 2909300 2909422 CTGCATGCTAGGTATTCAGC 58 2909238 2909256 GATCCTGTACCACCATCGG 59 NA Drosophila melanogaster 61 Sodh-1 FBgn0024289 FBtr0081627 2 1 1 80 3R 2879312 2879595 CTTTAATGGCTGCTCAAGC 57 2879639 2879657 CTTTAGCTACATCGAGGCG 58 NA Drosophila melanogaster 61 Sodh-1 FBgn0024289 FBtr0081627 1 1 1 80 3R 2879311 2879595 ACTTTAATGGCTGCTCAAGC 59 2879638 2879656 TTTAGCTACATCGAGGCGT 58 NA Drosophila melanogaster 61 tub FBgn0003882 FBtr0302338,FBtr0273017 2 2 2 67 3R 214104 214189 CTTCCTAAATGAGTCCACCC 57 214219 214237 GCAGCTCAAGGCTTATGAG 58 NA DesignRelaxed Drosophila melanogaster 61 Snap FBgn0250791 FBtr0074840 3 1 1 105 3L 20308392 20308505 AAGCTCATCAAGGTGTTGTG 58 20308573 20308591 TGTACCACTGATCCAACCG 59 NA Drosophila melanogaster 61 CG17145 FBgn0036953 FBtr0074823 2 1 1 112 3L 20214958 20215038 AAATTTGGTGCCATACTGGG 58 20215111 20215131 CGGATCACCGTATTATTGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG14086 FBgn0036860 FBtr0300720,FBtr0074994 2 2 2 81 3L 19272150 19272170 GTGCTGGTAATGTTTATCGAG 57 19272211 19272501 TTCGCTGGTAATTATCCTCTG 57 NA Drosophila melanogaster 61 Prestin FBgn0036770 FBtr0075153 2 1 1 82 3L 17894111 17894131 CTACTCTAAATGCGGATCCCA 59 17893993 17894072 CATTAGGAGGTTTACAATTCCCAC 59 NA Drosophila melanogaster 61 CG32189 FBgn0052189 FBtr0075163 1 1 1 197 3L 17828093 17828111 CAACTGATTCGTCCACCAC 58 17827914 17827932 ATCTGGTGTTTCAGTTGGC 58 NA DesignNoJunctionSingleExon, InUTR Drosophila melanogaster 61 CG13064 FBgn0040796 FBtr0089378 2 1 1 72 3L 16273793 16273811 CTCTCACGAAGATTGCCCA 59 16273846 16273865 AGAGGAACATGTTCGTAGGG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 PDCD-5 FBgn0036580 FBtr0075483 2 1 1 80 3L 16224615 16224634 CAGGAGGAAATGAAGCACTC 58 16224497 16224576 GCTGACTTTGAGGGTATTAAGTC 59 NA Drosophila melanogaster 61 CG13073 FBgn0036577 FBtr0075486,FBtr0075485 1 2 2 60 3L 16206243 16206263 TACTGTACACGGAAGTCTACC 58 16206203 16206221 GAATGGAAATCGCTGGAGG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 mrn FBgn0261109 FBtr0075595 2 1 1 235 3L 15573356 15573374 TACTGTTCGTGGATCAGCC 59 15573084 15573102 CTTATCCAGCGTGTTGGTC 58 NA DesignNoJunction Drosophila melanogaster 61 CG7739 FBgn0036509 FBtr0075596 3 1 1 82 3L 15555895 15555916 AGATTTCAATTCCGACGAACTC 59 15555775 15555855 TATAGTGCCCGAAGAGTATCTG 59 NA Drosophila melanogaster 61 CG9425 FBgn0036451 FBtr0075692 1 1 2 80 3L 14788829 14788978 CCAATGATTCTACAAGGATCATCC 59 14789017 14789035 AAAGCTCCGAAGTGAAACG 58 NA Drosophila melanogaster 61 CG32121 FBgn0052121 FBtr0113424 3 1 1 84 3L 13410949 13411039 CAGAATGTTCGGTATGCCT 57 13410883 13410901 GATGTCGGTAGCTAACGTG 58 NA Drosophila melanogaster 61 l(3)S147910 FBgn0086699 FBtr0075960 3 1 1 60 3L 12517558 12517578 TTTCGAGGACATAGAAAGCCA 59 12517598 12517618 TTCACTCTGTTGATTCTTGCG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG34241 FBgn0250825 FBtr0112435 1 1 1 215 3L 12121219 12121293 AAATCAGCCCATCCTGACC 59 12121467 12121490 CCATTGCGTAGATAAACACTATCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG33489 FBgn0053489 FBtr0089525 1 1 1 80 3L 11569480 11569498 TTCATCGAGGTCACATCGT 58 11569098 11569440 GATCAAAGGGCTTATCGTATCTG 59 NA Drosophila melanogaster 61 CG14160 FBgn0036066 FBtr0076316,FBtr0113160 1 2 2 89 3L 10081959 10081977 TGAGCTGGTTTATTGGAGC 57 10081408 10081906 CACTGGAGGTATATGCCAC 57 NA Drosophila melanogaster 61 defl FBgn0036038 FBtr0076403 1 1 1 100 3L 9718021 9718040 CTTTCAGCTGCGTAAGTACG 59 9718103 9718178 TGGGATTTATCTTGGGCGG 59 NA Drosophila melanogaster 61 Hsp67Bb FBgn0001228 FBtr0100653,FBtr0100655 3 2 2 82 3L 9366349 9366367 TCATATTCACCTGCCGGTC 59 9366411 9366499 GATCACCACATTGCTGTATCC 59 NA Nonspecific Drosophila melanogaster 61 CG4452 FBgn0035981 FBtr0089495 3 1 3 116 3L 9361012 9361031 AACAAACAGACGGATAACCT 57 9361110 9361215 GCACTCTGTGATTTGGTGG 59 NA DesignRelaxed, InUTR Drosophila melanogaster 61 CG13314 FBgn0035949 FBtr0076518 1 1 1 60 3L 8976047 8976065 GCGGTTCTACAATGATCCC 58 8976089 8976107 CTTCGTGAGCAGTGATTCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Mcm7 FBgn0020633 FBtr0076585 2 1 1 81 3L 8884871 8884956 AAGACCGAGAATCTATCAAGAC 57 8884998 8885016 GATCCGTAGACGAACTCCT 58 NA Drosophila melanogaster 61 CG14837 FBgn0035797 FBtr0290223 2 1 1 144 3L 7551435 7551455 GAGATGGTTCTGATAAGTGCC 58 7550665 7551329 CTTTACGACTTTCCACGGC 59 NA Drosophila melanogaster 61 CTCF FBgn0035769 FBtr0076878 3 1 1 100 3L 7347074 7347154 CTTTGGTTTCGAGGACGAC 58 7346992 7347013 CAATCATATCCATCAGCTGCAG 59 NA Drosophila melanogaster 61 CG8620 FBgn0040837 FBtr0076918 1 1 2 135 3L 7151488 7151506 ATTCGAAAGGCCAACATGG 58 7151605 7151687 GAACTGGAACTCCATCGGA 59 NA Drosophila melanogaster 61 CG13293 FBgn0035677 FBtr0077050 2 1 1 84 3L 6082556 6082635 CATTCCAGGCTGATGTCCA 59 6082683 6082701 TTGCAGATGTAGCAGAGGG 59 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 1 2 2 80 3L 5429398 5429626 GGAGAACTCCTATCGTGCC 59 5429669 5429688 GAGATGCATCGATAGTTGCC 59 NA Drosophila melanogaster 61 CG12027 FBgn0035585 FBtr0073372 2 1 1 107 3L 5011733 5011809 TTGATGATCTACCAGAGAACCA 58 5011647 5011665 TGCCATCTTTGGCTTTCAC 59 NA Drosophila melanogaster 61 Gr63a FBgn0035468 FBtr0114512 1 1 1 80 3L 3896330 3896408 CCGGAATTTAAGCCGAGTG 59 3896268 3896292 GATGGGTAATACTCCAATAATCCTC 58 NA Drosophila melanogaster 61 Patj FBgn0067864 FBtr0072781,FBtr0301625,FBtr0072779 3 3 3 67 3L 1800667 1800685 ACGGAAGTTGTACCCTTGG 59 1800775 1800794 TACTTGTGACGGGTGATCAC 59 NA DesignNoJunction Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 2 4 4 111 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345761 1345779 ACTTAAGGAATGCGTTCGG 58 NA Drosophila melanogaster 61 Gyk FBgn0025592 FBtr0072530,FBtr0072529 3 2 2 80 3L 203609 205379 GGGAAGGTTGAGGAAATAATCAC 59 203551 203569 TTGGCCGGAGTTTCTATCC 59 NA Drosophila melanogaster 61 CG12483 FBgn0040688 FBtr0072540 1 1 1 60 3L 98294 98312 GTCCTGGATTACTTGGGTG 57 98112 98131 GGGTTGATCTGGAACTTGAG 58 NA DesignNoJunction Drosophila melanogaster 61 5SrRNA:CR33428 FBgn0053428 FBtr0086420 1 1 1 60 2R 15626051 15626069 ATAGATCGGTTCTCGTCCG 58 15626009 15626027 TCTAAGTACTAACCGCGCC 59 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG3363 FBgn0034987 FBtr0072260 2 1 1 130 2R 20078140 20078158 AGGACACGGATAAGTCAGG 58 20078252 20078330 AGGTTTGTTAGCATCTGCC 58 NA Drosophila melanogaster 61 CG5594 FBgn0025698 FBtr0072137,FBtr0072136,FBtr0072139,FBtr0072138 3 4 4 80 2R 19801154 19801172 AGCACAGTCTACTTGTCCA 58 19801216 19801293 AGACTGACCGAATTTGTCC 57 NA Drosophila melanogaster 61 CG32835 FBgn0052835 FBtr0071992 1 1 1 110 2R 18841030 18841048 GAAATCTTGACGGTAGCGA 57 18839577 18840956 AACAATGTTGATCCGACGA 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 jbug FBgn0028371 FBtr0301374,FBtr0301375,FBtr0302374,FBtr0302117,FBtr0301377,FBtr0302116,FBtr0071919,FBtr0301376 2 8 8 177 2R 18612191 18612209 CAAGTCATACGATGCCAGC 59 18611659 18612050 AAATCTTGCACTGCCTTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Oatp58Db FBgn0034715 FBtr0071778 3 1 1 82 2R 18110763 18110837 TTACAGAGATTTGCGACTGC 58 18110700 18110719 AAATAGGTAAAGGCCATGGC 58 NA Drosophila melanogaster 61 CG11269 FBgn0034700 FBtr0071765 1 1 1 65 2R 18026461 18026479 CAAGTGCTGTCTGTTCTGC 59 18026508 18026526 ATACCCAGCAGATTCAGCA 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30280 FBgn0050280 FBtr0300928,FBtr0300929 2 2 2 191 2R 18001169 18001253 AGACGCTGAATTTGTTTGGA 58 18001458 18001476 CTGGAACTTTCAGGGTGTG 58 NA DesignNoJunction Drosophila melanogaster 61 Grx-1 FBgn0034658 FBtr0071714 1 1 1 60 2R 17645264 17645282 TCATCGATGGCAAGTTCGT 59 17645306 17645324 ATGCCCTGTTCGTATAGCC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG10082 FBgn0034644 FBtr0071662,FBtr0071661 2 2 2 80 2R 17543804 17543881 GGCAGACATGCAATAACAG 57 17543925 17543943 TAAACATAGCCTCCGTTGG 57 NA Drosophila melanogaster 61 CG9485 FBgn0034618 FBtr0300395,FBtr0071601,FBtr0071599,FBtr0071600,FBtr0300394 2 5 5 97 2R 17204978 17204996 CCTGTTGACGGAGATTTCG 58 17205055 17205131 GGCGATCAGAAATGTAATCCA 58 NA Drosophila melanogaster 61 Glycogenin FBgn0034603 FBtr0302214,FBtr0089601 2 2 3 121 2R 17092793 17092873 CGCCTTCAAACAGTTCAGAG 59 17092957 17092975 CATGAGCATACTCCGACGA 59 NA Drosophila melanogaster 61 Cht9 FBgn0034582 FBtr0071542 2 1 1 130 2R 16956136 16956216 GAGATTAAGGAGGCGTTCG 58 16956024 16956044 GTCATCACGTTGATAAAGTCG 57 NA Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100495,FBtr0100496 3 2 2 61 2R 16439430 16439450 CGAGTCTAAGAAGCGATTGTG 59 16439322 16439410 CCACAGAACCCAAATTATTTGC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 SdhA FBgn0261439 FBtr0086552,FBtr0086553,FBtr0086554 2 3 3 91 2R 15280207 15280225 GACTATTGTGAGCGCTGAG 58 15280074 15280155 TGCTGAAATCGTATTCATCCTC 58 NA Drosophila melanogaster 61 CG18605 FBgn0034411 FBtr0302494,FBtr0086571 1 2 2 80 2R 14865374 14865395 CGCCAATTCGCTATATTCTCTG 59 14865433 14865529 GGATTGAGACGGAAATATTCGG 59 NA Drosophila melanogaster 61 CG14500 FBgn0034318 FBtr0086752 3 1 1 60 2R 14076568 14076588 AGGAAACCATTACCCTTTGTC 58 14076610 14076628 ACCAGGAGACACTTATCCG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ssp4 FBgn0022085 FBtr0300603,FBtr0273447,FBtr0273446,FBtr0086949,FBtr0086948,FBtr0086950,FBtr0300605 2 7 8 106 2R 13414811 13414889 CAGGAGAAGGAGGATTTGG 57 13414723 13414741 TACTTGTCCAAATCCACGG 57 NA Drosophila melanogaster 61 CG30456 FBgn0050456 FBtr0273336,FBtr0273337 1 2 2 80 2R 12993550 12993630 GCAATTCCTAGATCAACATTGC 58 12993671 12993689 AGATCGCATAGCTTGAGGG 59 NA Drosophila melanogaster 61 CG15615 FBgn0034159 FBtr0300552 3 1 1 80 2R 12681815 12681915 TCCTTCATGGAAGAAGATCTGG 59 12681756 12681774 TGTTTCCAAGCTGGAACCT 59 NA Drosophila melanogaster 61 Obp50d FBgn0050074 FBtr0087554 1 1 1 80 2R 10260708 10260784 ATGTAACTGCCTTGAGAAACTG 59 10260823 10260843 CCAAATACTGACTGCACTTGG 59 NA Drosophila melanogaster 61 SelD FBgn0261270 FBtr0087564,FBtr0087565 2 2 2 60 2R 10157302 10157321 ATGATCCCTACATGATGGGC 59 10157261 10157280 ATGGCATACAAATCGCTGAG 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG30487 FBgn0050487 FBtr0087802 3 1 1 60 2R 8825672 8825691 GCAATAGAGGCAACTTTGGA 58 8825631 8825650 GTGTATGCTTCGGAATTCGT 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 Cpr49Ag FBgn0033730 FBtr0087922 2 1 1 60 2R 8295525 8295625 TTCAACAGCAGCTATGAGAC 58 8295645 8295666 TCTTCAGATAGCCAATGTTCTC 58 NA DesignRelaxed Drosophila melanogaster 61 CG30046 FBgn0050046 FBtr0087895 3 1 1 80 2R 8203101 8203177 CCCACCTATACGTCATCCG 59 8203221 8203239 CGGATCATTGGGAAAGTCG 58 NA Drosophila melanogaster 61 EndoG FBgn0033690 FBtr0088012 1 1 1 60 2R 8065278 8065296 TCAAGTACGAGGTCATCGG 58 8065236 8065256 ATAACCTTGTAGAAGTGGGTG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 wal FBgn0010516 FBtr0088082,FBtr0088083 2 2 2 82 2R 7578188 7578206 CGTAATCTTATGCGCAGCA 58 7578033 7578055 GGATTGAGTACCTCATTGTTGTG 59 NA DesignNoJunction Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 CG33475 FBgn0053475 FBtr0088318 1 1 1 60 2R 6298484 6298506 CTTGATATCCAAGGTTTACTCGG 59 6298446 6298464 AAATACCGTGGAATTGCCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG12910 FBgn0033502 FBtr0088337 1 1 1 99 2R 6154677 6154695 GACTACAGCAACAGTTGGC 59 6154755 6155249 GGACATTACCTACGATATCCGT 59 NA Drosophila melanogaster 61 pdm3 FBgn0033288 FBtr0114491,FBtr0088741 3 2 2 119 2R 4278940 4279015 CAGTATAAACAGGCTGAATGCC 59 4279095 4279113 GGACCAGGTGAATCATCCC 59 NA Drosophila melanogaster 61 az2 FBgn0025185 FBtr0088980 2 1 1 103 2R 3399275 3399349 AAAGCTGGTGTTCACAGAG 58 3399190 3399208 GATTGCAGAAGTGCTTGTG 57 NA DesignNoJunction Drosophila melanogaster 61 p120ctn FBgn0260799 FBtr0111113,FBtr0111114 3 2 2 82 2R 494808 495866 TTCCATCGTCATCTAAAGGAG 57 495907 495928 GAGAGCATCGGAATTATTAGCT 58 NA DesignNoJunction Drosophila melanogaster 61 CycK FBgn0025674 FBtr0085942,FBtr0085941 2 2 2 60 2L 22129034 22129055 AACGATGGAAATACTCGAAGAC 58 22128995 22129013 TTGGGTTGATTGGTACAGG 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33829 FBgn0053829 FBtr0091833 1 1 1 60 2L 21478462 21478484 CTAGAATTATTCCGCGTCATCTG 59 21478503 21478522 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 His2A:CG33814 FBgn0053814 FBtr0091818 1 1 1 60 2L 21453212 21453234 CTAGAATTATTCCGCGTCATCTG 59 21453253 21453272 AGCTTGTTTAACTCCTCGTC 58 NA Nonspecific, DesignNoJunctionSingleExon Drosophila melanogaster 61 CG18810 FBgn0042133 FBtr0081386 3 1 1 60 2L 20649817 20649836 ATGAAGTGGACCTGGATCTC 59 20649859 20649877 GATCAAATCCGTCGTGGTC 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG41073 FBgn0259997 FBtr0100266 1 1 1 81 2L 20231623 20231755 GGATTTAGCGTAGTCCACG 58 20231560 20231578 TTTCTCGGCATTCCTTTGG 58 NA Drosophila melanogaster 61 CG10659 FBgn0032839 FBtr0081350 1 1 1 60 2L 20025328 20025346 AAAGGACTGGGATCACGAC 59 20025286 20025305 GAAATCCTTTAGCTCGACCC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 swm FBgn0002044 FBtr0081244,FBtr0081245 1 2 2 182 2L 19496696 19496716 GCGAATAACAAGTCTACCCAC 59 19496859 19496969 GCCGAAGTTCTTAAAGTGCC 59 NA Drosophila melanogaster 61 CG4278 FBgn0014092 FBtr0080834 1 1 1 60 2L 16327497 16327515 ATAAGAAGAGTGGTGGCGT 59 16327536 16327557 CGGATGCTGATGATATTCACTG 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 ppk FBgn0020258 FBtr0080638 1 1 1 82 2L 14379901 14379919 GTTCTTCGCCTTTCTGCAG 59 14379782 14379858 TGAGAAAGACCTTATAGCCCTG 59 NA Drosophila melanogaster 61 CG31855 FBgn0051855 FBtr0290000,FBtr0080467 2 2 2 69 2L 13369404 13369425 TCAGTACGAGACTTTATCAAGG 57 13369455 13369473 GTTCGTTGCTCAAATGGGT 59 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 t-cup FBgn0051858 FBtr0080381 2 1 1 60 2L 12496897 12496917 GATCGTTGGGAATCCATACTG 58 12496857 12496875 GCTCATCGATGACTTCACC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG5325 FBgn0032407 FBtr0080327,FBtr0080326 2 2 2 142 2L 12094704 12094780 AAGGAAAGGTACCAGAAGCA 59 12094885 12094903 CCGTAGTCTTGCAGTTTGC 59 NA Drosophila melanogaster 61 CG5317 FBgn0032404 FBtr0080296,FBtr0113037 3 2 2 80 2L 12056423 12056508 TGTCAGACAAATATGCGGTG 58 12056551 12056569 GCAGAATTCTCCTCTTGCG 59 NA Nonspecific Drosophila melanogaster 61 CG12264 FBgn0032393 FBtr0080290 3 1 1 203 2L 11999845 11999921 ACATCCAAAGAATTCCGGG 57 12000088 12000106 TACAGCGGACTCTGTTTCC 59 NA DesignRelaxed Drosophila melanogaster 61 chico FBgn0024248 FBtr0080088 1 1 1 80 2L 10245273 10245291 GGGATCTGGTGATCTGTGG 59 10245095 10245230 GACATAGCGCTCAGTATCGT 59 NA Drosophila melanogaster 61 CG12560 FBgn0031974 FBtr0300761 1 1 1 83 2L 8009303 8009323 CGCAATTGAAGGTCAATTTCC 58 8009180 8009258 GAGTATCCGAACGTAGCGT 59 NA Drosophila melanogaster 61 neuroligin FBgn0031866 FBtr0079344 3 1 1 80 2L 6901409 6901427 AGAACCAATCGGAAGACTG 57 6901470 6902261 TATCATCGGTGTTACGTCTC 57 NA Drosophila melanogaster 61 CG13994 FBgn0031772 FBtr0079188 3 1 1 80 2L 6063216 6063286 GCAAGAAGTCCAAATGCTG 57 6063330 6063348 CACAGTCTTCGTCATCCTC 57 NA Nonspecific Drosophila melanogaster 61 CG15434 FBgn0040705 FBtr0077440 1 1 1 60 2L 4454777 4454795 GAGCTGCGAATCATTCTGG 59 4454819 4454898 CCACGTATTCCCTGACTCC 59 NA DesignRelaxed Drosophila melanogaster 61 CG15431 FBgn0031602 FBtr0077459 1 1 1 164 2L 4408506 4408594 TATCGATGTGGTTCGATGGG 59 4408361 4408379 ATAGTTGCTGAAGATGCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG31928 FBgn0051928 FBtr0077929 1 1 1 60 2L 1493464 1493485 GTGAAGACTTGAACAACATCTG 58 1493506 1493524 AATGTGAAGATTGCTCCGA 57 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4764 FBgn0031310 FBtr0077960 1 1 1 60 2L 1150951 1150969 GCATACATCACATCCTGGC 58 1150992 1151011 TTCAGGTAGTCGTAGGACTC 58 NA DesignNoJunctionSingleExon Drosophila melanogaster 61 CG4644 FBgn0031300 FBtr0077989 2 1 1 82 2L 1103817 1103896 CTACAGCTTTAAGGACAGTGAC 58 1103756 1103774 GCTTCAGAATGCGGTTCAG 59 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 3 3 3 81 2L 738261 738333 CGTTAACTATCAGGACATGCC 59 738200 738218 CTCGAGAAGTCCTCCATCG 59 NA Drosophila melanogaster 61 mbm FBgn0086912 FBtr0078139 2 1 1 61 2L 272505 272571 GCATATGCGACAAGAAGGG 59 272462 272485 GGAGCAATTACGACATATCATCTG 59 NA DesignNoJunction Drosophila melanogaster 61 CG33635 FBgn0053635 FBtr0091612 1 1 1 158 2L 158529 158550 GAAGAAACCAAGTTTCAACGTC 58 158332 158350 ATTCCTAAACAGGCCACGA 59 NA DesignNoJunction Drosophila melanogaster 61 CG11023 FBgn0031208 FBtr0300689,FBtr0300690 1 2 2 68 2L 8088 8108 GTCAAGAAAGTCAGTGAAACC 57 8214 8232 GAGTCTGGTAGGTTGAGGG 58 NA DesignNoJunction Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078171,FBtr0078170 2 2 6 97 2L 15706 17065 TGCTTATCGTAAGACGGCA 59 15627 15645 CTGTTTGCGTCCCTATTGC 59 NA Drosophila melanogaster 61 l(2)gl FBgn0002121 FBtr0078168,FBtr0078166,FBtr0078169,FBtr0078171,FBtr0078170,FBtr0078167 3 6 6 81 2L 11515 11793 CAGAGGAAACCATTGGTCG 58 11452 11473 GGAATTTCACTCATGTTTACGG 58 NA Drosophila melanogaster 61 CG3164 FBgn0025683 FBtr0078153,FBtr0078155 2 2 4 125 2L 128931 130516 TAATAATCTACTGGGCACAGC 57 128826 128844 TACGTCAGGTTGTGAAAGG 57 NA Drosophila melanogaster 61 CG11455 FBgn0031228 FBtr0078118,FBtr0301888,FBtr0301887,FBtr0301886,FBtr0078117 2 5 5 110 2L 155732 155750 TCTCCGACTTTCAGGAGTG 58 155897 155915 ATTCTTGTCCCTTACGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG3436 FBgn0031229 FBtr0078119 3 1 2 94 2L 156467 156485 AGAAGGACATGAGGGAGAG 57 156543 156744 GCCAGATGTAGATTTGCCT 57 NA Drosophila melanogaster 61 Eaat2 FBgn0026438 FBtr0301316,FBtr0301317,FBtr0078043 2 3 3 81 2L 740677 740807 AATACTAGGACTCTCCTTACGG 58 740617 740635 CATAAACAGTTCGCCAGGA 57 NA Drosophila melanogaster 61 CG10869 FBgn0031347 FBtr0113010,FBtr0077917 3 2 2 175 2L 1586997 1587017 AAGGAACTCATAGATGTTGCC 58 1586779 1586860 CCCAAGGTCAGTAAACTGC 58 NA Drosophila melanogaster 61 CG9967 FBgn0031413 FBtr0077799,FBtr0100648 1 2 2 81 2L 2309693 2310136 GATTTCCTCAACGATTACAGC 57 2309632 2309650 GATCGAACTCCACGATGTC 58 NA Drosophila melanogaster 61 Slh FBgn0015816 FBtr0077782,FBtr0290208 2 2 4 80 2L 2490668 2490740 AGCGACATAATCTTCCGGT 58 2490606 2490625 AAAGGTAGTCATCCGTCTCC 59 NA Drosophila melanogaster 61 CG2991 FBgn0031474 FBtr0077627,FBtr0077625,FBtr0077626 1 3 3 107 2L 2866731 2866821 TGGAAGACCAAGGTTCCAG 59 2866892 2866910 CATCGAGTTCCAAAGGCAG 58 NA Drosophila melanogaster 61 Rbp9 FBgn0010263 FBtr0077639,FBtr0077637,FBtr0077640,FBtr0100468,FBtr0290237,FBtr0077638,FBtr0290238 3 7 7 80 2L 2963120 2963232 GCAATCTGTTAAGGTGATTCG 57 2963273 2963292 TCTTCGTAATTCGTCATGGT 57 NA Drosophila melanogaster 61 tim FBgn0014396 FBtr0114526,FBtr0302832,FBtr0100349,FBtr0077567,FBtr0100350,FBtr0114527,FBtr0302831,FBtr0077566 2 8 10 81 2L 3500563 3500645 TGCAACAAGACATTATCACCC 59 3500502 3500524 GTCAGCAAAGTTCTCTGATACTC 59 NA Drosophila melanogaster 61 fred FBgn0051774 FBtr0290301 3 1 2 106 2L 3916857 3916875 CGACAGCTATCAAGTGCTG 58 3915088 3916787 CAAGTGGTCCTGACTCTCC 59 NA Drosophila melanogaster 61 tutl FBgn0010473 FBtr0089269,FBtr0089270,FBtr0301864,FBtr0089271,FBtr0301863 1 5 6 90 2L 4307447 4307566 ACCTCAGCGTCGAATATCC 59 4307620 4307638 ATGTAGCACTGAACAACGC 58 NA Drosophila melanogaster 61 CG2950 FBgn0031637 FBtr0077411,FBtr0077409,FBtr0077410,FBtr0300941 2 4 4 84 2L 4845308 4845326 AAACCGACCAAGATTCCTG 57 4845147 4845260 TGATGCCCATTACTTTGCC 58 NA Drosophila melanogaster 61 CG11149 FBgn0031732 FBtr0300696,FBtr0300695 1 2 4 80 2L 5718709 5718727 GTAAGCGATAACACGGAGC 58 5718593 5718666 AGCATAGTTCTGTATGCGCT 59 NA Drosophila melanogaster 61 CG9171 FBgn0031738 FBtr0301236,FBtr0301234,FBtr0301235 3 3 3 80 2L 5770060 5770080 GTCTGGTCAAGAAGTTTCTCG 59 5769931 5770020 CCAATGGAAATACTCTGGGTG 58 NA Drosophila melanogaster 61 Gpdh FBgn0001128 FBtr0079146 1 1 3 95 2L 5947246 5947264 CCTGTTCACGGCTATTCAC 58 5947322 5947865 GACGTATCCATATGCTCAGG 57 NA Drosophila melanogaster 61 CG9098 FBgn0031762 FBtr0079228 1 1 2 80 2L 6011720 6011797 CCATGAATCTGGAAGCAATGAG 59 6011661 6011680 CACCCAGATACACCAATGGA 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 1 5 5 81 2L 6791571 6791589 TGATCTGGTACAAGGGCAC 59 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 nrv2 FBgn0015777 FBtr0100381,FBtr0079383,FBtr0079382,FBtr0079381,FBtr0100382 3 5 5 82 2L 6791572 6791590 TTGATCTGGTACAAGGGCA 58 6791314 6791526 ACTTTGTACACCGCAAGGA 59 NA Drosophila melanogaster 61 SP1070 FBgn0031879 FBtr0302162,FBtr0290119 2 2 3 85 2L 6973617 6973639 CGCTCTATGGAACTAAAGAAGAC 59 6973489 6973576 GCTATCACTATCACTCTTCTCCT 59 NA Drosophila melanogaster 61 Rab30 FBgn0031882 FBtr0079428 2 1 3 126 2L 7032260 7032278 AAGCTGATCCAACGAACCA 59 7032085 7032104 CAGGAACTTGTAGTCCTCCA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Mnn1 FBgn0031885 FBtr0079402,FBtr0110978,FBtr0079401 1 3 3 107 2L 7057578 7057596 ATCGAGCTGTCTTTGACGA 59 7057667 7057874 GTCATTTCCACCTGTCGTC 58 NA Drosophila melanogaster 61 ninaC FBgn0002938 FBtr0079436 1 1 2 80 2L 7383684 7383703 CAGCAAAGATCCTCGTATCC 58 7383745 7383815 CTCAGAGTTATCACCCTCGT 58 NA Drosophila melanogaster 61 Rapgap1 FBgn0085403 FBtr0112604,FBtr0112605,FBtr0112603,FBtr0112606 3 4 4 85 2L 7499871 7499889 TCAGTGTGAACACGAAGCT 59 7499746 7499825 ACTGCAGGTATTTAGATTGGGT 59 NA Drosophila melanogaster 61 Snoo FBgn0085450 FBtr0112719,FBtr0112717,FBtr0112721,FBtr0112718 1 4 5 60 2L 7896743 7975196 AAAGAAAGGCGGAAATGCTC 59 7896702 7896720 AATCCAAGAACAGGACCCG 59 NA DesignRelaxed Drosophila melanogaster 61 Bsg FBgn0011219 FBtr0079569,FBtr0079573,FBtr0079566,FBtr0079572,FBtr0079571,FBtr0079568,FBtr0079570,FBtr0079567 1 8 9 98 2L 8089728 8105703 AATCACTTGATAAGCTGGTGC 59 8105763 8105781 CTTTCACGTTGCAGCTGAG 59 NA Drosophila melanogaster 61 CG8455 FBgn0031997 FBtr0079588,FBtr0079587 2 2 2 82 2L 8200024 8200113 CTTTATGCTGGCCACTATAACC 59 8200153 8200174 AGCTATTGAAGACAAACTGCTG 59 NA Drosophila melanogaster 61 Btk29A FBgn0003502 FBtr0079616,FBtr0112836,FBtr0079617 3 3 6 85 2L 8284180 8284198 TTCATTTGAAGGGCGTTCG 59 8284053 8284131 GAACGGATAACCATCCGGT 59 NA Drosophila melanogaster 61 CG7818 FBgn0032016 FBtr0079599 1 1 1 98 2L 8309141 8309159 TCTGTAGCCACTGTAGGTG 58 8309277 8309295 TACAAACGAACGATGAGCA 57 NA DesignNoJunction Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717 1 1 2 180 2L 8389264 8390106 CTTAGCTCCCAATATGCGC 58 8389102 8389120 AACTCCTTCCTCGAATGGC 59 NA Drosophila melanogaster 61 CG13394 FBgn0032037 FBtr0079717 2 1 2 182 2L 8389265 8390107 ACTTAGCTCCCAATATGCG 57 8389101 8389119 GAACTCCTTCCTCGAATGG 57 NA Drosophila melanogaster 61 fu12 FBgn0026718 FBtr0079704,FBtr0302160,FBtr0079703 2 3 3 71 2L 8450794 8450812 GAGACTATCGAAATGCGCT 57 8450676 8450694 CCATTGTTATGCCCACCAG 58 NA DesignNoJunction Drosophila melanogaster 61 Sema-1a FBgn0011259 FBtr0110930 3 1 3 122 2L 8664757 8666335 GTGATTGAGACACAGCCAC 58 8666421 8666439 GTAGAGCTCATAGGAGGGC 58 NA Drosophila melanogaster 61 C1GalTA FBgn0032078 FBtr0079790,FBtr0079788,FBtr0079789 3 3 3 83 2L 8944164 8944247 TACAAGACGGATGAGGGAC 58 8944099 8944119 CAGCACATACATTTGATTGGG 58 NA Drosophila melanogaster 61 CG13101 FBgn0032084 FBtr0079783,FBtr0079784 1 2 2 80 2L 8978591 8978674 ATATGATGCTAATGAAAGCGCC 59 8978532 8978553 AGATCGATGAACATGCAAATCG 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 2 4 5 88 2L 9272528 9272549 GACGCATTAAAGAAGCAAATCG 59 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 Ggamma30A FBgn0028433 FBtr0079796,FBtr0079797,FBtr0079795,FBtr0301856 3 4 5 90 2L 9272526 9272544 GGGACGCATTAAAGAAGCA 58 9272598 9291064 GAGCGCATTTCTGCTATGG 59 NA Drosophila melanogaster 61 Oatp30B FBgn0032123 FBtr0079827,FBtr0079828,FBtr0079826,FBtr0079825 2 4 5 81 2L 9535892 9535998 CACCACTATATCGATCACTCC 57 9536041 9536059 CAGAATGACTCCGCATAGC 58 NA Drosophila melanogaster 61 CG15828 FBgn0032136 FBtr0079844,FBtr0079843 2 2 2 80 2L 9649135 9649210 AACACTCAACCAGCTTCAC 58 9649251 9649272 GTCTTAATCCTTCCATTAGCGT 58 NA Drosophila melanogaster 61 Apf FBgn0051713 FBtr0079895 1 1 1 83 2L 9938571 9938589 AGAAACGAAAGAGGAAGCC 57 9938448 9938466 TGCACCTGATAATTCAGGG 57 NA DesignNoJunction Drosophila melanogaster 61 CG4839 FBgn0032187 FBtr0079944,FBtr0079943 3 2 2 88 2L 10153792 10153874 GACAGAGAAGCCTTCATTAGC 58 10153924 10153942 GAACGACCACTCGTATCGT 59 NA Drosophila melanogaster 61 Pten FBgn0026379 FBtr0089900,FBtr0300562,FBtr0301521,FBtr0089904 3 4 7 81 2L 10257442 10257463 TCACATGTAAACAATCCTCTCC 58 10256494 10257402 TATGTTGATTCACCGGATTCC 58 NA Drosophila melanogaster 61 KdelR FBgn0022268 FBtr0080023,FBtr0080021 3 2 3 232 2L 10426913 10426933 TGTTTATGCCGACATTCTGAC 59 10427194 10427212 AAACACATGCGACAGATCC 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Nos FBgn0011676 FBtr0100487 1 1 10 60 2L 10831354 10831372 CAGCCCAGAAAGATGTCAC 58 10826069 10831331 TTCGAGCAGGAAAGAATCTG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 Ca-beta FBgn0259822 FBtr0300537 1 1 4 108 2L 11165641 11165659 GACTGTATGGCACAAAGGG 58 11165404 11165569 GAAGGGAGTACCTCAGGTG 58 NA Drosophila melanogaster 61 CG14932 FBgn0032375 FBtr0300384 1 1 2 80 2L 11790188 11790206 TGACGAGATTACCTGCGAG 59 11790302 11790384 CCATCCAAATCCATATCATCTTCG 59 NA Drosophila melanogaster 61 Pde1c FBgn0259225 FBtr0299784,FBtr0299783,FBtr0299781,FBtr0299786,FBtr0299785 1 5 6 100 2L 11835158 11835176 GAATATGTCGTTCACCGCC 59 11833360 11835094 GGAGACTGCGTATCCTTCC 59 NA Drosophila melanogaster 61 CG14945 FBgn0032402 FBtr0080295,FBtr0080294 3 2 2 123 2L 12051374 12051463 GATGTGTCTCGCTTCTCCA 59 12051549 12051568 TGCGCCAATTCACATTATCG 59 NA Drosophila melanogaster 61 CG31760 FBgn0051760 FBtr0301019 2 1 2 93 2L 12168535 12168553 TTCAACCTCGTTTCAAGCG 59 12168610 12168703 TAATTTCGTTGGCGTGCTG 59 NA Drosophila melanogaster 61 aret FBgn0000114 FBtr0080345,FBtr0080346,FBtr0300567 3 3 5 83 2L 12271330 12271594 CAACGATATCTACTTGGATGCT 58 12271637 12271656 CTGTGTATGGGACTATTCGG 57 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090023,FBtr0090018 3 2 17 114 2L 12727015 12727033 ATCTGTGGCTCACTCAGTG 59 12727110 12729197 AAGTACGAGGTAACTTGGCC 59 NA Drosophila melanogaster 61 MRP FBgn0032456 FBtr0090015,FBtr0090014 2 2 17 136 2L 12727107 12729939 TTTGGCCAAGTGCTATCCA 59 12730038 12730057 AATGGCGTTGTATCGAACAG 59 NA Drosophila melanogaster 61 CG31856 FBgn0051856 FBtr0080424 2 1 1 120 2L 13073311 13073329 GTCTGCTATCGTGCAACAC 59 13071806 13071824 GAACTACGTCCATCCACGA 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 Sfmbt FBgn0032475 FBtr0080492,FBtr0289981 1 2 3 98 2L 13175738 13175756 ATTACACTGGAGGATGCGG 59 13175268 13175678 ATTCATGTCCAAAGTTGGCTG 59 NA Drosophila melanogaster 61 loqs FBgn0032515 FBtr0100220 3 1 3 166 2L 13384637 13384657 CTTTGCGCTCTTATTTACAGC 58 13384782 13384992 GCAAGTCTTCTGTAACTTAAGC 57 NA InUTR Drosophila melanogaster 61 kuz FBgn0259984 FBtr0112886,FBtr0080509,FBtr0301412,FBtr0080510,FBtr0100660 3 5 5 81 2L 13634166 13634247 GTGTTCACCTACAGAGATTTCAC 59 13634288 13634306 AAATTCCACCAGAGGCTCC 59 NA Drosophila melanogaster 61 CG15279 FBgn0028886 FBtr0080686,FBtr0080685 2 2 3 80 2L 14846481 14846797 TACTTTGTTAAGGAAGTGCTGC 59 14846422 14846440 TCCAATGACCAACTCCCAG 59 NA Drosophila melanogaster 61 yuri FBgn0045842 FBtr0080711,FBtr0080712,FBtr0100613 3 3 9 177 2L 15261626 15261727 AGTGGAAATTGAATGCGATACG 59 15261470 15261491 GGTCCTAAACGTTGTAGTTGTG 59 NA Drosophila melanogaster 61 PRL-1 FBgn0024734 FBtr0080857,FBtr0080856 3 2 2 147 2L 16247174 16247260 ATTAGAGATAAACGACGCGGA 59 16247047 16247070 GTGGGAATATACATATGGTGTTGG 59 NA InUTR Drosophila melanogaster 61 dac FBgn0005677 FBtr0100399 1 1 7 80 2L 16483832 16483850 GCAAGGACTTCGACATCCT 59 16475395 16481532 GTCTACCCGGTCTTTCTGG 59 NA Drosophila melanogaster 61 CG42389 FBgn0259735 FBtr0300004 3 1 4 132 2L 16622735 16622753 GGAATACTACATCGCACCG 58 16652750 16652768 CTGGGAGACCATCTGAACG 59 NA DesignNoJunction Drosophila melanogaster 61 grp FBgn0261278 FBtr0080886,FBtr0080884,FBtr0080885 1 3 4 80 2L 16692116 16696595 ATCGAATAGAACCAGACGTG 57 16696638 16696656 GGTAATTGAGTCCGGACAG 57 NA Drosophila melanogaster 61 Ugt36Bc FBgn0040260 FBtr0080911,FBtr0080912 1 2 2 133 2L 16800513 16800611 TTCTATGACCGTCTTTGGAG 57 16800707 16800725 ATTACTCCAGGCACATTCG 57 NA Drosophila melanogaster 61 CG31781 FBgn0051781 FBtr0080922 3 1 2 80 2L 16870939 16870959 AGGAAGAAGTGAAAGAAGGAG 57 16877498 16877518 GTTTCCTTTAGGATGTCAGCT 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 dl FBgn0260632 FBtr0301384,FBtr0081007,FBtr0081005,FBtr0301383,FBtr0081006 2 5 5 80 2L 17442579 17442666 GGATACGCCATATCGTCCT 58 17442517 17442537 TTGATCTCCAGTGTACAGACG 59 NA Drosophila melanogaster 61 Oli FBgn0032651 FBtr0080986 2 1 1 147 2L 17590721 17590739 CTTCTGTGCGAAAGCTGTC 59 17590910 17590928 AATGCACCCAAATCCAGTG 58 NA DesignNoJunction Drosophila melanogaster 61 CadN FBgn0015609 FBtr0081014,FBtr0081018,FBtr0081016,FBtr0081013 1 4 12 112 2L 17717920 17717939 AGTATACAGCCTGACTGCTC 59 17715898 17717845 ATCGATAACGGTCACGGTC 59 NA Drosophila melanogaster 61 CG17544 FBgn0032775 FBtr0081218,FBtr0081217,FBtr0081216,FBtr0300822 1 4 4 80 2L 19391956 19392078 GTATCAACTGCATCAATATCGC 58 19391897 19391915 CTTGTCAGCTCTTCAGTGG 58 NA Drosophila melanogaster 61 CG10462 FBgn0032815 FBtr0081325 1 1 3 105 2L 19735628 19735779 AGAATTCTGAGCGCATGTG 58 19735541 19735559 TAAATAGGCGCTCGTCCTC 59 NA Drosophila melanogaster 61 lok FBgn0019686 FBtr0081330,FBtr0081329 3 2 3 111 2L 20061916 20061934 CAGGCCTCCAATATCTGGA 58 20062009 20062162 CGTCGTTGTTGAGATCCAG 58 NA Drosophila melanogaster 61 spir FBgn0003475 FBtr0081353,FBtr0081352 2 2 5 158 2L 20334699 20334720 ACGATACCAAAGAACTAGAGCA 59 20336394 20336472 CACCTGCTTCATTGTTCAGG 59 NA Drosophila melanogaster 61 ik2 FBgn0086657 FBtr0081389 2 1 2 102 2L 20677479 20677585 GAACGATAGATCAGCCAATATTCC 59 20677646 20677664 ACATTGGGAGGGAACACTG 59 NA Drosophila melanogaster 61 CG9331 FBgn0032889 FBtr0081421,FBtr0081420,FBtr0081417,FBtr0081418,FBtr0081419 2 5 5 133 2L 20825963 20825981 AAGAGACGTAAGATCCCGC 59 20826076 20826641 CACTTGTCATTGTCGATGGTC 59 NA Drosophila melanogaster 61 Ret FBgn0011829 FBtr0081496,FBtr0081494,FBtr0081493,FBtr0081492,FBtr0081495 1 5 5 88 2L 21184334 21184355 GAGCCTGTTAATGTTAAGATGG 57 21184212 21184288 CGATGAACCAACTTTAACTCAG 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 3 11 13 139 2L 21308293 21308311 CAAGTGCATGAATCTGGCC 59 21301519 21304836 TTTGTATGAACTGCATGTGCC 59 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0301464,FBtr0301460,FBtr0301457,FBtr0301461,FBtr0301463,FBtr0301462,FBtr0301458,FBtr0081524,FBtr0081526,FBtr0081525,FBtr0301459 1 11 13 134 2L 21308288 21308306 GCATGAATCTGGCCTACAG 58 21301519 21304835 TTTGTATGAACTGCATGTGC 57 NA Drosophila melanogaster 61 Mio FBgn0032940 FBtr0081526 1 1 13 94 2L 21287935 21287955 CAAATTCACCTTCCGTCAGTG 59 21287714 21287879 CAAACTCAAGGGCGATGTG 59 NA Drosophila melanogaster 61 CG17715 FBgn0041004 FBtr0111249,FBtr0111246 3 2 6 194 2L 22737571 22741956 TATACGAGATTGAGACGGCA 58 22742218 22742236 TGGTGTTTCCTAGTCCTGC 59 NA Drosophila melanogaster 61 Nipped-B FBgn0026401 FBtr0301456,FBtr0301454,FBtr0301455 2 3 5 170 2R 614797 614817 CACAAATTCTTGACGTCAGCA 59 614575 614665 TAGCCAATTCTGGTGACCG 59 NA Drosophila melanogaster 61 CG17082 FBgn0039994 FBtr0111287,FBtr0111288,FBtr0302385,FBtr0111285,FBtr0111290,FBtr0111289 2 6 6 84 2R 644025 644043 ATATTCACGGATTGGCACC 58 644091 644175 TGACTCCTTTGATCGACCA 58 NA Drosophila melanogaster 61 CG3107 FBgn0033005 FBtr0086078,FBtr0086077,FBtr0111280 2 3 3 103 2R 979974 980043 GTATTCAGACCAAACCTGGC 59 980106 980127 ACTCCTTTGATTACAAGCTTCG 59 NA Drosophila melanogaster 61 scarface FBgn0033033 FBtr0086061,FBtr0086060 2 2 2 100 2R 1566989 1567070 GTAAATGGTCTTCCGGTGAC 58 1566908 1566926 GTCTTGACTCCAGTCAGCT 59 NA Drosophila melanogaster 61 vlc FBgn0259978 FBtr0300503,FBtr0086041,FBtr0086042,FBtr0300502,FBtr0086040,FBtr0086039 1 6 6 84 2R 1591879 1591949 AATTCGAGGGTCTTTGCCA 59 1591991 1592015 CAGAATCCTTGTAAATCATCCAGAG 59 NA Drosophila melanogaster 61 CG11163 FBgn0025693 FBtr0086054,FBtr0086056,FBtr0086055,FBtr0086053 3 4 4 80 2R 1662571 1662644 GCATCTCGTTACAGACTCC 57 1662509 1662529 TTATATCTTGGGCTGGATACG 57 NA Drosophila melanogaster 61 CG7843 FBgn0033062 FBtr0086021,FBtr0086020,FBtr0086018 2 3 3 162 2R 1969442 1969460 TCTAAGCGTCCAGAATCGG 59 1968907 1969245 CCAAAGGCAATTCTCTGCG 59 NA Drosophila melanogaster 61 EcR FBgn0000546 FBtr0086011,FBtr0302439 1 2 6 166 2R 1982570 2010401 ATTCTATATCTTCAGGTCGCGA 59 1982425 1982443 GTTGTAGTGGTAGCCGGAG 59 NA Drosophila melanogaster 61 CG30159 FBgn0050159 FBtr0089761,FBtr0089760 2 2 3 80 2R 2880547 2880631 TAACGCTCCAAGTGTTATCC 57 2880671 2880692 CTCCAGGAAGTTACATAAGTCC 58 NA InUTR Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111068 2 1 59 93 2R 3244970 3244989 ATGAGATTAACTACGCCCGG 59 3236472 3244914 TTGTACCATCGGAAGGCAG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111085 3 1 59 81 2R 3237932 3237950 CTATATTCGCCCAGTGGGT 59 3236471 3237888 CTTGTACCATCTCATAGCGG 58 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111087,FBtr0111059,FBtr0111074 3 3 59 83 2R 3244530 3244548 CTGGACAAGCCTATGGGTC 59 3236468 3244489 GAACTTGTACCATCTATAAACTGGC 60 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111063,FBtr0111086 3 2 59 82 2R 3247431 3247449 CTCGAGTTCCCAAGATGGG 59 3236468 3247390 GAACTTGTACCATCTAAAGAAGGG 59 NA Drosophila melanogaster 61 Dscam FBgn0033159 FBtr0111082,FBtr0111057,FBtr0111059 1 3 59 80 2R 3233431 3233449 GGGTCTTCAAGTGCATAGC 58 3219874 3233387 ATCTGGGAGGTACGTTGAC 58 NA Drosophila melanogaster 61 Eaf FBgn0033166 FBtr0300697,FBtr0089007,FBtr0089011,FBtr0089008,FBtr0089006,FBtr0089010,FBtr0089012 3 7 8 103 2R 3293618 3293712 ATATGACTTCAAGCCAGCGA 59 3287509 3293554 CGGAACTTTCAGAATTTGGCA 59 NA Drosophila melanogaster 61 didum FBgn0261397 FBtr0089745,FBtr0089743 1 2 3 111 2R 3393995 3394013 TGGACAAGATCTTGCAACG 58 3394086 3394171 AGATCGGTGTATCGAATACAC 57 NA Drosophila melanogaster 61 CG1399 FBgn0033212 FBtr0300781,FBtr0300779 2 2 5 86 2R 3575794 3585628 CAAGGACCTCAACGAAAGC 59 3575726 3575746 CCTTTCGTCTCCAATTTGACC 59 NA Drosophila melanogaster 61 CG1553 FBgn0033224 FBtr0088902,FBtr0088901,FBtr0088900 3 3 3 117 2R 3689615 3689695 AAGTGTTCCGACTCGACTC 59 3689516 3689534 TCGTAGTCGACAGAATCGC 59 NA Drosophila melanogaster 61 CG12821 FBgn0040780 FBtr0113332,FBtr0113331 1 2 2 82 2R 3721690 3721708 TGTGGAGTACCATGTGGTC 59 3721751 3721829 AAAGACTTCCATCTGATCTGTG 58 NA Drosophila melanogaster 61 Dgk FBgn0085390 FBtr0112579 3 1 4 80 2R 3733370 3734275 ATCGGCAAATACTTTCTCCAC 58 3733310 3733329 AATTAGCTCGGAGTATTCGC 58 NA Drosophila melanogaster 61 l(2)44DEa FBgn0010609 FBtr0088699,FBtr0088700,FBtr0100430,FBtr0100427 1 4 9 148 2R 4562376 4563994 AAATGGACAGCTTCTGGGT 59 4564106 4565946 CACGATCTTTGCCTTCACG 59 NA Drosophila melanogaster 61 stmA FBgn0086784 FBtr0088715,FBtr0301639,FBtr0088716 3 3 3 82 2R 4619898 4619977 CCAATTCGTTTGTGAAGTTCG 58 4619836 4619857 GAACTTCGAGATGAAGAAGTCG 59 NA Drosophila melanogaster 61 CG8258 FBgn0033342 FBtr0088683 2 1 1 79 2R 4793148 4793166 CCACAATTGTGGCCTTCAG 59 4793023 4793041 GAAGTTGTCGGTAGCTCCA 59 NA DesignNoJunction Drosophila melanogaster 61 Pkn FBgn0020621 FBtr0088601,FBtr0088602,FBtr0302602 1 3 10 81 2R 5155477 5171347 GATTCGTATTATCAGGGCGA 57 5155415 5155434 GCAGATTCTCTGTGAAACCA 58 NA Drosophila melanogaster 61 Pfk FBgn0003071 FBtr0088422,FBtr0088420 2 2 3 80 2R 6000606 6000624 ATGCCATCTCCAGTACAGC 59 6000666 6001058 GAGCTAAATAGCCGCAATGAC 59 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 2 3 4 106 2R 6034472 6034493 GTGCTTAACTCATATCAGTTGG 57 6034320 6034408 CTATGAAGGCTTAACGTAACAC 57 NA Drosophila melanogaster 61 KCNQ FBgn0033494 FBtr0301444,FBtr0301443,FBtr0299833 3 3 4 106 2R 6034471 6034493 GTGCTTAACTCATATCAGTTGGG 59 6034320 6034409 CTATGAAGGCTTAACGTAACACG 59 NA Drosophila melanogaster 61 lola FBgn0005630 FBtr0100286,FBtr0089366,FBtr0089344,FBtr0089358,FBtr0089364,FBtr0089365,FBtr0089342,FBtr0089345,FBtr0089350,FBtr0089349,FBtr0089351,FBtr0089354,FBtr0089343,FBtr0089356,FBtr0089363,FBtr0089347,FBtr0089352,FBtr0089360,FBtr0089361,FBtr0089346,FBtr0089353,FBt 2 26 26 82 2R 6421013 6421096 CAGTCCCTACTTTGCTACCT 58 6420950 6420969 GCTCTTGGTACTTGACATCC 58 NA Drosophila melanogaster 61 CG11883 FBgn0033538 FBtr0088284,FBtr0113063,FBtr0088283 2 3 3 91 2R 6527407 6527427 CAATCATACAAGTTGTGCGTC 58 6527480 6527561 TCATCATCCATCAGCACAG 57 NA Drosophila melanogaster 61 stan FBgn0024836 FBtr0088214 1 1 2 110 2R 6604805 6604823 AAATGGAGGATCCCGACAC 59 6604897 6607313 ATATTCCGCTCGGTATCCG 59 NA Drosophila melanogaster 61 CG30015 FBgn0050015 FBtr0113356 3 1 4 80 2R 6731240 6735977 GTCTATCCATTGTACTCAAGTCTC 58 6731183 6731202 TCATCTTGAAGGGATTCTGC 57 NA Drosophila melanogaster 61 Drip FBgn0015872 FBtr0088141,FBtr0088142 3 2 2 175 2R 7300282 7300300 TTGATCCCTCCCTGAACTG 58 7300068 7300143 GCTCAGTTTGATTGCACAC 57 NA DesignRelaxed Drosophila melanogaster 61 tou FBgn0033636 FBtr0088091 3 1 3 120 2R 7469248 7470533 GCATTATGAAAGCGAATTGCC 59 7469148 7469166 ATGTTGTCCATCTTGGGCT 59 NA Drosophila melanogaster 61 CG30035 FBgn0050035 FBtr0088073 1 1 2 85 2R 7556172 7556776 TAACCCGAGTAGGTGACGA 59 7556824 7556843 AATTGTGTCCAAACTGGTCG 59 NA Drosophila melanogaster 61 MCPH1 FBgn0260959 FBtr0301430,FBtr0301428,FBtr0301429,FBtr0301431 2 4 4 80 2R 7786099 7786119 GCCATTAACCACAATAAGCCA 59 7785970 7786059 TCCACTGCTTATCCTGTTGAG 59 NA Drosophila melanogaster 61 fdl FBgn0045063 FBtr0087946,FBtr0087947 2 2 2 102 2R 8378097 8378115 ACTGGAACCAAGGAGTCAC 59 8377945 8378031 GACTTCTCGACGGGTATGG 59 NA Drosophila melanogaster 61 Su(z)2 FBgn0008654 FBtr0087793,FBtr0300387 1 2 2 80 2R 8887545 8887659 GGAACTTATAAGCTTATCCCTGG 58 8887699 8887717 TAAATAGTGGGAGGCACCT 57 NA Drosophila melanogaster 61 TppII FBgn0020370 FBtr0087775,FBtr0087774 3 2 2 91 2R 9040863 9040942 CCAAGATAAAGACCAACATGGA 58 9040793 9040811 TAATACAGCCAGCTTTGCC 58 NA Drosophila melanogaster 61 Dp FBgn0011763 FBtr0087740,FBtr0087741 2 2 2 80 2R 9114421 9114497 CAAATACGTAGAAGCCTACGG 58 9114538 9114557 CCGTTGAACTCATTGTCCTC 59 NA Drosophila melanogaster 61 cnn FBgn0013765 FBtr0087705,FBtr0100654,FBtr0087704,FBtr0100656,FBtr0087703 1 5 6 80 2R 9327940 9327960 GCGATGCTTAAGACTGTAGAG 58 9327817 9327899 GTCCGGTGATGTAGATTCCT 59 NA Drosophila melanogaster 61 CG6329 FBgn0033872 FBtr0087634,FBtr0087633,FBtr0087635,FBtr0087636 2 4 4 112 2R 9717360 9718064 CTGCATACAAGTGACCACTG 59 9718139 9718157 GTTTGCTGCAGTTCACCTC 59 NA Drosophila melanogaster 61 AGO1 FBgn0026611 FBtr0087613,FBtr0087612,FBtr0087614 1 3 3 80 2R 9837285 9837367 CTCAGATGCAATCATTCCCAC 59 9837225 9837245 ACTTGTCCAGGAAGTACTTGG 59 NA Drosophila melanogaster 61 CG8485 FBgn0033915 FBtr0087572,FBtr0087570,FBtr0087571,FBtr0087569 3 4 4 84 2R 10126046 10126143 GGTTCACAGGGATCTAAAGC 58 10125981 10125999 GTTGCTAAACCCGAAGTCG 59 NA Drosophila melanogaster 61 Ih FBgn0028428 FBtr0100372,FBtr0290110 2 2 7 85 2R 10179811 10179829 CAAGCTGTTATCCCTGGTG 58 10179876 10181607 TCTGCAGAATATAGACCTCCT 57 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 3 6 7 132 2R 10490378 10490680 GTGATTGACGCACAAACAC 58 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 tra2 FBgn0003742 FBtr0089619,FBtr0089617,FBtr0089620,FBtr0089616,FBtr0089615,FBtr0089621 2 6 7 130 2R 10490376 10490678 GATTGACGCACAAACACAG 57 10490264 10490282 AGAAATCGACGCGAATACG 58 NA Drosophila melanogaster 61 CG8079 FBgn0034002 FBtr0087367,FBtr0087368 3 2 2 81 2R 11109919 11110008 GACGCTTTCAAGACATTGC 58 11110053 11110071 ACTTTCAGCGACTCTACGT 58 NA Drosophila melanogaster 61 fus FBgn0023441 FBtr0302330,FBtr0087347,FBtr0087346,FBtr0087344,FBtr0087345,FBtr0087348,FBtr0087343 3 7 7 136 2R 11550671 11550750 TTATCAATGCACAGGGCCA 59 11550553 11550571 GAACACCTCGATGTACCGA 59 NA Drosophila melanogaster 61 CG42662 FBgn0261538 FBtr0302554,FBtr0302556,FBtr0302555 2 3 3 91 2R 11587253 11587274 CCTTATATCGAAAGATCTCGCA 58 11587114 11587206 CTCGAGGAATCTAACATATTGCTG 59 NA Nonspecific, DesignRelaxed, InUTR Drosophila melanogaster 61 Zasp52 FBgn0083919 FBtr0111048,FBtr0301314,FBtr0100387,FBtr0087315 3 4 7 93 2R 11652754 11660561 AATAATGTGTACCGAGGTGC 58 11652680 11652699 CTGCCTTATTCAGGATACCC 57 NA Drosophila melanogaster 61 Sema-2a FBgn0011260 FBtr0087089,FBtr0087090,FBtr0087091,FBtr0087088 2 4 4 92 2R 12416662 12416685 GCACTGATCTGTATAATACTTCGG 59 12416735 12416872 AGTTTGGTTTGTCCAACCAC 59 NA Drosophila melanogaster 61 CG30463 FBgn0050463 FBtr0113380,FBtr0087112 3 2 5 83 2R 12566525 12566547 GGTATCTGGACAACATTTATCCC 59 12566340 12566488 CGCCATAACCTAGATTTCTTATCTC 59 NA Drosophila melanogaster 61 CG6429 FBgn0046999 FBtr0087044 2 1 1 69 2R 12760787 12760805 ATTGACCATACCTGGCGAC 59 12760907 12760925 ACAATACGGATCATTGGCG 58 NA DesignNoJunction Drosophila melanogaster 61 CG15609 FBgn0034180 FBtr0114626,FBtr0087019,FBtr0114628 1 3 6 81 2R 12897606 12897624 GAGGCTATCGACCAGAAGG 59 12896433 12897561 CTGTCTCCTCGGTCTTTGG 59 NA Drosophila melanogaster 61 mbl FBgn0053197 FBtr0086993 2 1 7 144 2R 13163434 13163452 CTGCAATTGGAGGTCTGTC 58 13163557 13183349 ATGTACATACCTTGATGCTGTC 58 NA Drosophila melanogaster 61 l(2)k01209 FBgn0022029 FBtr0086914,FBtr0086913,FBtr0086915 3 3 4 85 2R 13309440 13311168 CAATGGTCACATCGATGACC 59 13311216 13311234 GCAAGCCATTGCTTAGGTC 59 NA Drosophila melanogaster 61 qkr54B FBgn0022987 FBtr0086925,FBtr0086923 3 2 3 81 2R 13359056 13359074 GCAACAATGTCTTGGGTGG 59 13359118 13359207 TGTGAGCTCCTATAGCTGTG 59 NA Drosophila melanogaster 61 CG30105 FBgn0050105 FBtr0086899 1 1 1 149 2R 13479587 13479605 GAACTACGACAAAGTGCCG 59 13479392 13479410 TACGTGCTTTCCTTGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG10936 FBgn0034253 FBtr0086894,FBtr0086895 1 2 2 80 2R 13494101 13494122 GAAACCAGAGCTACTTGATCAC 59 13493972 13494061 TAAACTTCGTTGAGCTGTGC 59 NA Drosophila melanogaster 61 CG4984 FBgn0034267 FBtr0086862,FBtr0299817 2 2 4 60 2R 13619768 13619859 GACGAACTATTGGACTATATCCG 58 13619878 13619897 TCACGAACAGTGTTATGCAG 58 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 grh FBgn0259211 FBtr0300539,FBtr0300541,FBtr0299706 2 3 7 96 2R 13714746 13714765 AGGATCAGAATCAGGATCGC 59 13714819 13714908 ATGTGAGGTCTGTAGATAGATCTG 59 NA Drosophila melanogaster 61 hts FBgn0004873 FBtr0301357,FBtr0301361,FBtr0301360 3 3 10 146 2R 15295396 15295415 CACCAGGTCATTGAGATCCA 59 15286302 15286542 ATCCTGGAACTCTTTACTGCT 58 NA Drosophila melanogaster 61 Fak56D FBgn0020440 FBtr0086542,FBtr0301883,FBtr0086543,FBtr0086544 3 4 6 129 2R 15319744 15319819 GAAGAATTGCTACGGCAGAG 59 15319634 15319652 AACTGGAGTTCGAGCAGTC 59 NA Drosophila melanogaster 61 par-1 FBgn0260934 FBtr0086458,FBtr0086459,FBtr0086453,FBtr0086460,FBtr0086457 2 5 19 97 2R 15361385 15361403 CAAGTGGCATCATTCCACG 59 15361463 15362042 CGATCCACTGTTTGTCTCTG 58 NA Drosophila melanogaster 61 sm FBgn0003435 FBtr0086492,FBtr0086495,FBtr0301610,FBtr0110898,FBtr0100232,FBtr0301609 2 6 6 124 2R 15418200 15419688 TATTGAGGGTAAAGGCACCA 58 15418095 15418113 CCACCTCGTTCTCCTTCTC 59 NA Drosophila melanogaster 61 Ate1 FBgn0025720 FBtr0086319 1 1 3 80 2R 16143736 16143956 CAAACATCGGCTAAAGATCGT 59 16143676 16143694 CGATACAACGCGATCACTG 59 NA Drosophila melanogaster 61 CG8929 FBgn0034504 FBtr0086283,FBtr0086285,FBtr0086284 1 3 3 80 2R 16217661 16217743 GACCTGAAGGACTATATCAAGTG 58 16217781 16217801 GTACTCATAGTAGCGTTCCTG 57 NA Drosophila melanogaster 61 Cpr57A FBgn0034517 FBtr0086263,FBtr0299803 3 2 2 119 2R 16437227 16437245 TAGCCACAAACTGGAGGAC 59 16437056 16437144 TTTGCTAGTGCAACTTGGC 59 NA Nonspecific Drosophila melanogaster 61 CG13430 FBgn0034518 FBtr0100496 2 1 2 80 2R 16439321 16439409 CAAATAATTTGGGTTCTGTGGC 58 16439262 16439283 TCAAGGGATTAAAGTCTCAGCA 59 NA InUTR Drosophila melanogaster 61 bl FBgn0015907 FBtr0086221,FBtr0086220,FBtr0301760 2 3 5 80 2R 16483310 16485063 GAGGACTCAGTATAAAGCCAC 58 16485963 16485984 TCTATATCCGCCGATATTTGGA 58 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 Treh FBgn0003748 FBtr0071539,FBtr0071538,FBtr0071535,FBtr0071540,FBtr0071537,FBtr0071536 2 6 6 80 2R 16972827 16972846 TTTAATGCCATGATGGAGGC 58 16972887 16972967 TGCACTGAAGTACTTATCGAC 57 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0302298,FBtr0071793,FBtr0302297,FBtr0071794,FBtr0113104,FBtr0302295,FBtr0071792,FBtr0071795,FBtr0302296,FBtr0071796,FBtr0071791 3 11 11 97 2R 17998431 17998842 CCAACCTAAATATCTCGTTAGGC 59 17998356 17998374 CGAGGAGGTTAGACTGCTG 59 NA Drosophila melanogaster 61 Vrp1 FBgn0243516 FBtr0071793,FBtr0071794,FBtr0113104,FBtr0071795,FBtr0071796,FBtr0071791 1 6 11 88 2R 17996480 17997105 GACAGTCGAGCAATCAGGA 59 17996410 17996430 CCCTTGGCGATTTATATGGAG 58 NA Drosophila melanogaster 61 wdp FBgn0034718 FBtr0071852 1 1 4 177 2R 18195752 18197443 TCCAAGTTGATCTGGCCAG 59 18188395 18188413 ACCACAATGAGGAACAGGG 59 NA InUTR Drosophila melanogaster 61 CG9826 FBgn0034784 FBtr0071895,FBtr0071894 3 2 2 156 2R 18728408 18728426 GTCGTTCCTGCTCTTTCTC 58 18728605 18728626 GAAACTGGAGAGTATGTACGAC 58 NA DesignNoJunction Drosophila melanogaster 61 nahoda FBgn0034797 FBtr0071942,FBtr0071943 2 2 2 80 2R 18801627 18801709 GAGGCATTGGAATACAAGAGC 59 18801751 18801769 ACGTGTCTCGGAAAGATCG 59 NA Drosophila melanogaster 61 Pde8 FBgn0034886 FBtr0072074,FBtr0302130,FBtr0072077,FBtr0302126,FBtr0302128,FBtr0302129,FBtr0302127,FBtr0302132,FBtr0072075,FBtr0072076,FBtr0302131 2 11 13 81 2R 19562656 19562674 CATGTGCAGTGTGGAACTG 59 19562719 19562886 GTAGAGGGCCTGTTGAGTG 59 NA Drosophila melanogaster 61 CG9850 FBgn0034903 FBtr0100330 1 1 3 80 2R 19644063 19644947 TAGTCTACAATGTAACCAGCAG 57 19644004 19644022 GATTCTCGTCCTTGTTGCT 57 NA Drosophila melanogaster 61 TBPH FBgn0025790 FBtr0089627,FBtr0301643,FBtr0089626,FBtr0089625,FBtr0301644,FBtr0089624 2 6 6 94 2R 19748030 19748103 ATTATCAAGGGCGTTTCGG 58 19747954 19747973 GCAGAGTTGTAGTTGTAGCT 57 NA Drosophila melanogaster 61 Unc-89 FBgn0053519 FBtr0091464,FBtr0113464 1 2 2 80 2R 19885415 19885498 GGAGAGTCATTACCAATACGGA 59 19885356 19885374 TACTCTCGCAATCTCACCG 59 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072363,FBtr0100470,FBtr0290019,FBtr0072364,FBtr0072366 3 6 6 82 2R 20287859 20287949 GAAGAAGTCCTTAGTCAAAGATCC 59 20287800 20287821 CCAGATTTCTGTTGATGAAAGC 58 NA Drosophila melanogaster 61 slik FBgn0035001 FBtr0072365,FBtr0072364,FBtr0072366 1 3 6 121 2R 20281908 20281926 TAAGCCAGGACATAGTCGC 59 20281025 20281823 GTTGCTGTAGTTGTCTCGG 58 NA Drosophila melanogaster 61 CG4692 FBgn0035032 FBtr0072340,FBtr0072339 3 2 2 194 2R 20487184 20487203 TATCCAGCTGAGTACAACCC 58 20486890 20486908 GAACACGTACTTGTGCTGC 59 NA DesignNoJunction Drosophila melanogaster 61 Eps-15 FBgn0035060 FBtr0072433 3 1 3 82 2R 20657199 20659261 ACTTCGACAATAAGAACCAGAG 58 20657138 20657158 CTCTCCAAATGCATCAAACAC 58 NA Drosophila melanogaster 61 Dll FBgn0000157 FBtr0072378,FBtr0072379 1 2 3 120 2R 20721067 20721160 CACAGTGGCGGTAATAACG 59 20721243 20721328 GTGGGAATTCAGGTGAAAGC 59 NA Drosophila melanogaster 61 Atf-2 FBgn0050420 FBtr0072381,FBtr0072382 1 2 3 80 2R 20766555 20766575 TACATAGTGGCCCTAATAGCG 59 20766614 20766696 ATTATGGAACCAAGTTACTCCG 58 NA Drosophila melanogaster 61 emp FBgn0010435 FBtr0072400,FBtr0072402,FBtr0072401 2 3 3 86 2R 20865281 20865299 ACAACATGTGCTTCTGTCC 58 20865155 20865232 TGGGAGAGTCGTATTGACAC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092,FBtr0072443 2 3 3 102 2R 20920193 20924124 GCTCAATGCCGCTATTCAG 59 20924184 20924208 CATCAGTTGATTTATAAGGGACTCC 59 NA Drosophila melanogaster 61 Nplp1 FBgn0035092 FBtr0110861,FBtr0290092 2 2 3 92 2R 20925046 20925237 ATTCCTAGACACATCCAAGGA 58 20925291 20925309 TCCATATACGCCTCGTCTG 58 NA Drosophila melanogaster 61 rno FBgn0035106 FBtr0072531,FBtr0072532 2 2 2 88 3L 197405 197425 CGAACGAAATGGTATTCTGTG 57 197279 197355 TAGCCATTGTCCTGATGGA 58 NA Drosophila melanogaster 61 CG16971 FBgn0260457 FBtr0072498,FBtr0072497,FBtr0072496 2 3 3 248 3L 224170 224977 ACTACGAAGTGAAGTCGCA 59 225772 225792 CGACGTAGTTTCTTGTTTGTG 58 NA DesignRelaxed, InUTR Drosophila melanogaster 61 mthl10 FBgn0035132 FBtr0072573 1 1 2 102 3L 335048 335067 TTATATCTCGGATCTGGCCA 57 333631 334983 ACTCGAGCATCTGTTTGTG 58 NA Drosophila melanogaster 61 CG6905 FBgn0035136 FBtr0072569,FBtr0300727 3 2 2 60 3L 360681 360759 GAGTACTTGCTAGACCAAGC 58 360640 360658 GAGGATCATCCATCGTGTC 57 NA DesignRelaxed Drosophila melanogaster 61 MED14 FBgn0035145 FBtr0072554 2 1 2 108 3L 593650 593734 CTGGCTGAACTATTACCACG 58 593805 593823 ATTTGACCAGCGCATTCAG 59 NA Drosophila melanogaster 61 CG2469 FBgn0035205 FBtr0072668,FBtr0072669 2 2 2 142 3L 1307714 1307732 AGAGATCCCTTTGCAGGAC 59 1307900 1307979 GTTTGTAGTAGGCAAGCGC 59 NA Drosophila melanogaster 61 Myo61F FBgn0010246 FBtr0072675,FBtr0072673,FBtr0072672,FBtr0072674 1 4 4 80 3L 1326068 1326086 CTCGAGAACTACCAGAGCG 59 1326125 1326209 AATGTAGGTATAGATCAGGTCCTC 58 NA Drosophila melanogaster 61 Ptp61F FBgn0003138 FBtr0072716,FBtr0072717,FBtr0072719,FBtr0072718 2 4 4 111 3L 1345851 1345950 TGGTTCAAATTAACCGATCTCG 59 1345761 1345779 ACTTAAGGAATGCGTTCGG 58 NA Drosophila melanogaster 61 CG7852 FBgn0035229 FBtr0072735,FBtr0072737,FBtr0072736 2 3 3 80 3L 1539120 1539207 AGAATCTGTATAGATGTCTTCCTCG 59 1539240 1539263 CCTCGTAGAGTATGTTGTATACGT 59 NA Drosophila melanogaster 61 CG18170 FBgn0035239 FBtr0100191,FBtr0100190 2 2 2 68 3L 1603343 1603361 CAAATAGACTCGCAACCGC 59 1603393 1603469 TGTGGTTCCTATCGAGGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 1 6 6 80 3L 1605041 1605162 CAGTTCCGTAGATGAGTCCT 58 1605203 1605223 GAAACCTGAAGAGGACTTCTC 58 NA Nonspecific Drosophila melanogaster 61 CG33791 FBgn0035240 FBtr0091792,FBtr0300892,FBtr0091794,FBtr0091795,FBtr0300891,FBtr0091793 2 6 6 62 3L 1606884 1606967 CCATCAAGACCATAAAGTATTCCTC 59 1606987 1607005 GACCCTCGAAGAATCCTGG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 CG13802 FBgn0035330 FBtr0072886 1 1 2 88 3L 2283029 2297486 CGATTTGTGTAGCAGGTAGC 59 2297534 2297555 CTGGCGTTTCATTTAAATTCCC 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Shab FBgn0003383 FBtr0072974,FBtr0110776 1 2 4 166 3L 2941470 2941490 TTATAAGAATCAGATGCGCCG 58 2941618 2947888 AGAGATTGTGGCCTGTGTC 59 NA Drosophila melanogaster 61 BtbVII FBgn0012049 FBtr0073025,FBtr0073024,FBtr0273252 2 3 3 80 3L 3150145 3150226 TACTTTCAGGCTTTGTTCACC 58 3150266 3150286 CTTTAGGTCATCGTACTGCAC 58 NA Drosophila melanogaster 61 PHGPx FBgn0035438 FBtr0073068,FBtr0073066,FBtr0073067 2 3 3 132 3L 3328065 3328083 TGGTGATCCTCAACTTCCC 59 3328179 3328264 CCATTCACATCGACCTTGG 58 NA Drosophila melanogaster 61 CG42324 FBgn0259224 FBtr0299778 3 1 2 125 3L 3507092 3507110 AGTTGAAGTCCACGAACTC 57 3507199 3507307 GATTCTCCGCCTTAATCGT 57 NA Drosophila melanogaster 61 Eip63E FBgn0005640 FBtr0073135,FBtr0110924,FBtr0073134,FBtr0110920,FBtr0302598,FBtr0073133 2 6 13 129 3L 3578466 3593333 ATTGCAGATATGGAGACTGG 57 3593423 3593443 GAATGGTACTTCATCTCCTCG 58 NA Drosophila melanogaster 61 Gad1 FBgn0004516 FBtr0073276,FBtr0073277,FBtr0073275 1 3 3 80 3L 4075935 4076811 TTTCAAGGAGGATGGCCTG 59 4075873 4075892 ATGTCATACTGCTTGTCGGT 59 NA Drosophila melanogaster 61 CG14995 FBgn0035497 FBtr0302303,FBtr0302304,FBtr0073273 2 3 6 122 3L 4095861 4097515 ACGAAAGAGGAATACTACCAGTC 59 4095761 4095779 ATAGGGATTGTGGTGCACC 59 NA Drosophila melanogaster 61 CG1308 FBgn0035507 FBtr0302564 3 1 3 121 3L 4195603 4195623 TGCAGAAGTCTCTAAACTCGA 58 4195705 4195849 ACCATTGCGCAAGTTATCAC 59 NA Drosophila melanogaster 61 CG11347 FBgn0035542 FBtr0073294,FBtr0073297,FBtr0073295,FBtr0113140,FBtr0073296,FBtr0113141 1 6 6 204 3L 4418981 4418999 CAACTATCTGCAACGCTCG 59 4419167 4419441 ATAAACGGACATGCAGGAC 57 NA DesignRelaxed Drosophila melanogaster 61 CG42540 FBgn0260657 FBtr0301098 3 1 4 81 3L 4568936 4577922 GGTTTCGATCGGGATACAC 58 4578773 4578792 ATGTTGATGCCTTATCGCTG 58 NA Drosophila melanogaster 61 CG34391 FBgn0085420 FBtr0290012,FBtr0112634 2 2 2 80 3L 5430814 5430833 AATACCTTTGCCATCCACAC 58 5430871 5432308 GATGAGGGTATGATATTGTTCTCC 58 NA Drosophila melanogaster 61 sif FBgn0085447 FBtr0112708,FBtr0112709,FBtr0112710,FBtr0112713 2 4 8 93 3L 5733294 5739572 GATGAAGGACCTAGGGTCC 58 5739629 5739647 TTTCACATCGTCTTTGCGG 59 NA Drosophila melanogaster 61 scny FBgn0260936 FBtr0077104,FBtr0077103,FBtr0077102,FBtr0077101,FBtr0077099,FBtr0077100 1 6 6 69 3L 5765429 5765447 AACGGCTAGAGGATATGGG 58 5765537 5765555 GAGAATTGCTTTGTGGCAG 57 NA DesignNoJunction Drosophila melanogaster 61 mp FBgn0260660 FBtr0301107,FBtr0301114 1 2 11 136 3L 7042663 7043669 CCGAATACGAAACGCTACG 59 7043769 7043787 GAGGAATGCCTTGAAGGTG 58 NA Drosophila melanogaster 61 mp FBgn0260660 FBtr0301113,FBtr0301112,FBtr0301114,FBtr0301105,FBtr0301111,FBtr0301108 3 6 11 81 3L 7005317 7005335 GCATTGGCAATGATTTGCA 58 7005379 7005847 CCAGGGCATCTTTAATGGAC 58 NA Drosophila melanogaster 61 CG32391 FBgn0052391 FBtr0300824 2 1 2 80 3L 7061825 7061845 TATATGCTTGCCGGATTTCTG 58 7061712 7061785 GAGGTCATACGCCATTAAAGC 59 NA Drosophila melanogaster 61 lqf FBgn0028582 FBtr0076798,FBtr0076796,FBtr0076795,FBtr0112941,FBtr0076797,FBtr0076794 3 6 6 80 3L 7527253 7527341 AGCAGGATTTCAAGGATCCA 59 7527381 7527402 GCAGATCTAGCAAATGACTCTG 59 NA Drosophila melanogaster 61 Ank2 FBgn0085445 FBtr0112701,FBtr0302845,FBtr0112699,FBtr0302841,FBtr0112695,FBtr0302844,FBtr0112694,FBtr0302842,FBtr0112702,FBtr0302843,FBtr0112698 2 11 15 80 3L 7693413 7693497 ACTGTACAAGGAAGTCATCCA 58 7693353 7693374 TTAGCTTCGAATGGTTCTACCT 59 NA Drosophila melanogaster 61 CG7422 FBgn0035815 FBtr0301205 2 1 2 97 3L 7729959 7731215 AAACGTAAATCTGTGCTGCA 58 7729881 7729899 GGATCGTTGAAGACAGCCT 59 NA Drosophila melanogaster 61 mthl7 FBgn0035847 FBtr0076726,FBtr0076727 2 2 2 107 3L 8172115 8172136 CCTGACAGCCATTTACATTAGG 59 8171966 8172048 TGTAGGTAAGTCTGGCTGTC 58 NA Drosophila melanogaster 61 TrpA1 FBgn0035934 FBtr0300209 1 1 2 82 3L 8889678 8889696 GAACAGATTGAGGCCAAGC 59 8889437 8889633 GTTACCATGGTGTTCACCAC 59 NA Drosophila melanogaster 61 CG5741 FBgn0035937 FBtr0301137,FBtr0301913 1 2 5 116 3L 8927399 8927512 TTTACCAGAAGGCTTGTAACC 58 8927213 8927231 CATCTTCCTGACGTTTGGC 59 NA Drosophila melanogaster 61 CG5026 FBgn0035945 FBtr0301141,FBtr0076516,FBtr0076515 1 3 3 80 3L 8963986 8964060 CTGTGGAGTGATCTCTATTTGC 59 8964100 8964119 GACAAGTTCCTGAATTTGCG 58 NA Drosophila melanogaster 61 Rdl FBgn0004244 FBtr0076536 2 1 3 93 3L 9156062 9161908 GTTCTAATGGACTTCACATTGG 57 9155990 9156010 ATAGTGTTTCTACACCAGGTC 57 NA Drosophila melanogaster 61 RpS9 FBgn0010408 FBtr0076425,FBtr0076423,FBtr0076424 1 3 3 97 3L 9503744 9504166 TCTGTTCCAGGGTAATGCC 59 9503665 9503683 CAATCTTCAGACCCAGCAC 58 NA Drosophila melanogaster 61 CG42268 FBgn0259163 FBtr0301858,FBtr0299606 2 2 3 97 3L 9731294 9731314 GCAAGCAATTGAATGACATCG 59 9730373 9731235 CACTTGACCCTGTCTACGT 59 NA Drosophila melanogaster 61 CG8177 FBgn0036043 FBtr0076327,FBtr0076321,FBtr0076319,FBtr0076323 3 4 12 115 3L 9774994 9775719 CTACCTGGGTAATTTGTCTGG 58 9775795 9775814 ACATATCGTCCTTCATGTCG 57 NA Drosophila melanogaster 61 I-2 FBgn0028429 FBtr0112935 1 1 2 104 3L 9829382 9829400 ATTCACGATTGTCCAGCAG 58 9829234 9829315 CTATCTGTGTTACGTCAGGC 58 NA Drosophila melanogaster 61 nudE FBgn0036059 FBtr0114600,FBtr0113158,FBtr0076344,FBtr0113159 3 4 4 98 3L 9893399 9893533 CTCTCAAGCTCAAGTTGGA 57 9893595 9893613 GGTACACCTTCATGGTGTC 57 NA Drosophila melanogaster 61 CG8065 FBgn0036075 FBtr0301227 3 1 1 80 3L 10209371 10209391 CCAACATGAAGTTCTGTTTCG 58 10209493 10209511 TCAGAGCGCTTACCAAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG6279 FBgn0036125 FBtr0301365,FBtr0076235 1 2 2 138 3L 11087403 11087421 AAGCTACTCAAGCATTGGC 58 11087228 11087302 CAAAGTGTTCAACCTCCTCC 58 NA Drosophila melanogaster 61 CG11660 FBgn0036187 FBtr0076135,FBtr0076134 2 2 2 64 3L 11641364 11641382 CAAATATAGCGACGCCGAG 59 11641259 11641277 TGAAGTCGTTTGTCCACTC 57 NA DesignNoJunction Drosophila melanogaster 61 Est-P FBgn0000594 FBtr0076004 2 1 1 128 3L 12185118 12185136 TCTTCACCGAAAGTATGGC 57 12185284 12185302 AAGTCATCTCCGTGGACAG 59 NA DesignNoJunction Drosophila melanogaster 61 Ptp69D FBgn0014007 FBtr0075914 2 1 2 125 3L 12731687 12731706 TGGAGCCGTATTACTTGGTG 59 12731791 12731883 AACAATGCCCTCAAAGAATCTC 59 NA Drosophila melanogaster 61 CG10738 FBgn0036368 FBtr0302487 2 1 2 128 3L 13455001 13455021 AGTATTAGCAAGAGGATCCGT 58 13455111 13455313 AGTTTGAGATTGGGCAACG 58 NA Drosophila melanogaster 61 nuf FBgn0013718 FBtr0100041 2 1 6 96 3L 14223198 14223287 AAAGATTGTCTGGAACTGCTG 58 14223345 14223363 CATATTCGGTCTTGGTGCG 59 NA Drosophila melanogaster 61 CG9628 FBgn0036433 FBtr0075678,FBtr0301239,FBtr0075677 1 3 3 80 3L 14620524 14620543 TTGCTATGTGACCTTTGGAG 57 14620586 14620664 CATGGAGTCAAATCACCGA 57 NA Drosophila melanogaster 61 ome FBgn0259175 FBtr0299651 3 1 3 91 3L 14733239 14737299 GCGGTTCAAGAATCTAATGCA 59 14737351 14737370 ATAGAGCAACCGCTATGACC 59 NA Drosophila melanogaster 61 Trl FBgn0013263 FBtr0100443 1 1 9 95 3L 14747518 14750018 CTGGACTTGCTAAAGGCTG 58 14747441 14747459 CAGTTGTATCGAGTGCGTG 59 NA Nonspecific Drosophila melanogaster 61 Trl FBgn0013263 FBtr0100443 3 1 9 95 3L 14747518 14750018 CTGGACTTGCTAAAGGCTG 58 14747441 14747459 CAGTTGTATCGAGTGCGTG 59 NA Nonspecific Drosophila melanogaster 61 CG17839 FBgn0036454 FBtr0075695 2 1 2 80 3L 14871663 14871986 GGAGGGTTAACATATGCTATCC 58 14872027 14872045 GCAGTTCGATCTCATCACC 58 NA Drosophila melanogaster 61 CG17028 FBgn0036552 FBtr0302493,FBtr0075515 2 2 2 94 3L 15972113 15972415 CGCTAAGAAGATAAACCAAGCA 59 15972470 15972488 GCTTGTAGAGACGCTTCAC 58 NA Drosophila melanogaster 61 CG9706 FBgn0036662 FBtr0075327,FBtr0075326 3 2 2 136 3L 16777686 16777705 GAACACATTGTGCAATCTGG 58 16777804 16777987 CTTCACAGCTCTGTTGCTC 58 NA Drosophila melanogaster 61 Exn FBgn0261547 FBtr0302650,FBtr0302651 3 2 5 81 3L 16978376 16978395 GATTGGTCGAAACGGATCAG 59 16978437 16984131 AGTAGTGGTCTGAGTCATCCT 59 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299646 1 1 7 90 3L 17535059 17536617 GCATATTCAATGAAGACACCG 57 17536669 17536687 TTGTCTTCCTCGGAATTGC 58 NA Drosophila melanogaster 61 Nedd4 FBgn0259174 FBtr0299648,FBtr0300519,FBtr0299646,FBtr0300520,FBtr0299645,FBtr0299647,FBtr0299642 1 7 7 80 3L 17537429 17537447 GTTCGGTAACGAAGACCGA 59 17537490 17537572 GGCCTCCATAATCTAAGCCA 59 NA Drosophila melanogaster 61 Eip75B FBgn0000568 FBtr0075151 3 1 4 182 3L 17952716 17954118 CTATCACAATGCGCCTGTG 59 17952552 17952570 GTGAACTCACAGGTCTCGA 59 NA Drosophila melanogaster 61 GNBP2 FBgn0040322 FBtr0075094,FBtr0075095 1 2 4 142 3L 18668068 18668327 CCATACCAGATGAGCCTGG 59 18667944 18667962 GTCGTTGTTCTGCAGACTC 58 NA Drosophila melanogaster 61 Ir76a FBgn0260874 FBtr0301607 2 1 5 93 3L 19792718 19794557 ACTGTGAGACCTTCATAGCA 58 19794613 19794631 CGCAGAGATCTCCAAATGG 58 NA Drosophila melanogaster 61 fbl FBgn0011205 FBtr0078186,FBtr0078189,FBtr0078187,FBtr0078188,FBtr0078190 3 5 5 147 3L 20381809 20381827 CAAGCTGGTCTACTTCGAG 57 20381938 20383024 ATTGTCCATCTGTAGGTGC 57 NA Drosophila melanogaster 61 CG5910 FBgn0036993 FBtr0078195,FBtr0300411 1 2 2 80 3L 20439489 20439854 AAATTTAACGGCTCAAGAGGTC 59 20439894 20439913 GCCTAGGCAATACTTTGGTG 59 NA Drosophila melanogaster 61 Pitslre FBgn0016696 FBtr0078249,FBtr0078248 3 2 4 128 3L 20764865 20764883 AATTGGCGACTTTAGCTGC 59 20765715 20765733 GGTCTTGGGACAAGTACAC 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG10508 FBgn0037060 FBtr0273212,FBtr0273213 2 2 4 101 3L 21207469 21208483 AAAGACAGACATCGTCAGC 57 21208548 21208566 GGAATTGGGTCCCAAACTG 58 NA Drosophila melanogaster 61 CG12974 FBgn0037065 FBtr0078410,FBtr0078411 1 2 2 124 3L 21276339 21276358 TTTCCATGATGGTCATCTCC 57 21275743 21276255 GAACAAAGTATCCACATTGTCC 57 NA Drosophila melanogaster 61 AP-2 FBgn0023417 FBtr0078419,FBtr0078418 2 2 2 87 3L 21605211 21605229 ATAGCCGAAGTACAGCGTC 59 21605280 21605358 TCTTGCTCTTAGCCCTTCG 59 NA Drosophila melanogaster 61 Arf79F FBgn0010348 FBtr0078575,FBtr0299906,FBtr0078574,FBtr0078573,FBtr0112858,FBtr0078571,FBtr0299907 1 7 7 82 3L 22862817 22862835 TTACAGTGTGGGATGTGGG 59 22862560 22862777 GAAGATAAGACCTTGTGTATTCTGG 59 NA Drosophila melanogaster 61 CG9795 FBgn0037234 FBtr0078907,FBtr0078906,FBtr0078905 3 3 4 107 3R 151087 151105 TCTGACCAGATCAATCCGG 58 151175 151429 ATTTCTCAAGGGTACGGAGG 59 NA Drosophila melanogaster 61 tacc FBgn0026620 FBtr0089955,FBtr0089953,FBtr0302614,FBtr0089952,FBtr0302615,FBtr0302616 1 6 10 83 3R 570241 570259 AAAGTTTGGAGGTCTTCCC 57 569895 570197 TTCAGTTGAGTATCCATATCGG 57 NA Drosophila melanogaster 61 CG12173 FBgn0037305 FBtr0078821,FBtr0300669 3 2 2 112 3R 1082049 1082070 GTGCGCTATTTAATTGATCAGG 58 1081649 1081976 TCTTCGTATACATGGCCCT 57 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0078817,FBtr0110932,FBtr0100197,FBtr0273432,FBtr0078815,FBtr0100199,FBtr0078811,FBtr0273434,FBtr0078814,FBtr0078813,FBtr0273433,FBtr0078812,FBtr0078818,FBtr0078816,FBtr0110933,FBtr0273431,FBtr0273430,FBtr0078810 3 18 19 89 3R 1100515 1100533 CACTGAACTCCCTGTACCG 59 1100028 1100462 GGGCACCAAATACGTTGTG 59 NA Drosophila melanogaster 61 l(3)82Fd FBgn0013576 FBtr0110933 1 1 19 89 3R 1119842 1119860 AACAAGTCGGGAGACACAG 59 1119471 1119789 AGTAATGGGCGAGCTTGAG 59 NA Drosophila melanogaster 61 CG16708 FBgn0037315 FBtr0078804,FBtr0078803 2 2 2 118 3R 1185005 1185083 GACATAACCATGCGATCGC 59 1184905 1184923 TTGTCGCTAGAGCTAGCTG 59 NA Drosophila melanogaster 61 CG2663 FBgn0037323 FBtr0078795,FBtr0078796 3 2 2 254 3R 1227160 1227242 GTACTGGACTATGTGCACTG 58 1226925 1226943 GAACTTCTTCACCACGGTG 58 NA DesignRelaxed Drosophila melanogaster 61 Itp-r83A FBgn0010051 FBtr0078687 2 1 2 83 3R 1356993 1357011 AAGACGCTTCTGTCCATCC 59 1357054 1357146 CTCTTCGACAGAATCAATATCCG 59 NA Drosophila melanogaster 61 sec23 FBgn0037357 FBtr0078710,FBtr0078711 3 2 2 95 3R 1476894 1476980 AGTTGATTCGTCTGTGCCA 59 1477039 1477057 TGAATTGCGGGAATAGGCT 59 NA Drosophila melanogaster 61 CG1109 FBgn0046222 FBtr0078713,FBtr0078714 3 2 2 81 3R 1489639 1489722 GAGTGTGAATACGATGATGCA 58 1489763 1489783 TGTCGGCAGTTAAACTTTCAG 59 NA Drosophila melanogaster 61 CG1041 FBgn0037440 FBtr0110774 1 1 2 178 3R 2199092 2199191 AATATCAAAGCCCAACGTCTG 59 2198869 2198887 AATGGTCTTCTGGACGGTG 59 NA Drosophila melanogaster 61 Taf1 FBgn0010355 FBtr0301622,FBtr0081685 3 2 4 121 3R 2480796 2480942 GCAGCAAGATGAATCCATGG 59 2481026 2481044 GGAAGTTGGTGAAAGCACC 59 NA Drosophila melanogaster 61 CG1104 FBgn0037467 FBtr0081643,FBtr0081644 3 2 2 93 3R 2897573 2897646 GGTATCACGATTTGGTCCTG 58 2897499 2897517 TGATTCTGCATTGTCTGCA 57 NA Drosophila melanogaster 61 CG2767 FBgn0037537 FBtr0081822 1 1 2 80 3R 3832606 3832630 CTGGACTATGTGGACTTATATTTGG 59 3832490 3832570 CTTGTCGAGCTTAAAGCTTCC 59 NA Drosophila melanogaster 61 CG11672 FBgn0037563 FBtr0081865 3 1 1 70 3R 4116238 4116256 TCTGGGAGTACTTGCTCTG 58 4116124 4116144 CCATCTTTGTTTCATAGCCGA 58 NA DesignNoJunction Drosophila melanogaster 61 CG8116 FBgn0037614 FBtr0081905,FBtr0300543 2 2 3 90 3R 4542212 4542230 TAGACAGTAACGGTGGAGC 58 4542284 4542629 ATACCTGCTGGACTCTTCC 58 NA InUTR Drosophila melanogaster 61 pyd FBgn0003177 FBtr0301425,FBtr0112823 1 2 8 101 3R 4668548 4690515 AATTCTTTGGTGATCGAACCAC 59 4668468 4668486 GATTATCACGTCCACCGGA 59 NA Drosophila melanogaster 61 D1 FBgn0000412 FBtr0301524,FBtr0081988,FBtr0081987 1 3 3 95 3R 5064880 5065219 GAATGAAGACGATCAGGATGAG 58 5064806 5064824 TTCAGGTTGACGGATCCAG 59 NA Drosophila melanogaster 61 CG8121 FBgn0037680 FBtr0082017,FBtr0082019,FBtr0082018 3 3 3 82 3R 5161907 5161925 TGTTCTCGCTTATCATGGC 58 5161970 5162219 CTTCCTCTCGTATTCCTTGC 58 NA Drosophila melanogaster 61 CG5359 FBgn0037773 FBtr0082215,FBtr0300257 2 2 2 76 3R 5826674 5826695 ATAATGAACAACGTTATGGCCG 59 5826561 5826579 TCACTGGTCCACTTCTTGG 59 NA DesignNoJunction Drosophila melanogaster 61 hth FBgn0001235 FBtr0100455,FBtr0301956,FBtr0082254,FBtr0082255,FBtr0082253,FBtr0100454,FBtr0082256 2 7 8 89 3R 6417178 6419287 GAAGTCGACTCACTGATGG 57 6411627 6411647 GAAGTTATCGCATAACTCGTG 57 NA Drosophila melanogaster 61 CG17734 FBgn0037890 FBtr0082360,FBtr0082361 3 2 2 61 3R 7068727 7069513 ATGCTTGTGGGTATTACCG 57 7068684 7068702 TTCCGGTACTTGTACGCTC 59 NA DesignRelaxed Drosophila melanogaster 61 CG6782 FBgn0037912 FBtr0100461 3 1 4 220 3R 7388966 7388984 CTACGTGTATCCGCATGAC 58 7386744 7386763 ATAGGTGATGCAGATCTCGA 58 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG6959 FBgn0037956 FBtr0299594,FBtr0082517 1 2 2 87 3R 7650661 7663895 CATTTGAGGCTTCAACAACCA 59 7650594 7650613 TAGGATAATGGCAGCGATGG 59 NA InUTR Drosophila melanogaster 61 CG12213 FBgn0260742 FBtr0113223,FBtr0082510 1 2 3 80 3R 7791205 7791284 TGGATGAAGATCAAGATGAGGA 58 7791146 7791167 CTTAGTGTCTAATAACCTCGCC 58 NA Drosophila melanogaster 61 CG14736 FBgn0037986 FBtr0301724,FBtr0301722 1 2 3 97 3R 7867603 7867621 TTCAGTGGCGGAAGTAGTG 59 7867682 7867754 AAGGCTTCACCAGTACCTG 59 NA Drosophila melanogaster 61 desat1 FBgn0086687 FBtr0082630,FBtr0082628,FBtr0082627,FBtr0082626,FBtr0082629 2 5 5 74 3R 8270797 8270816 CTACCTCATGGTCACCTCTG 59 8271712 8271730 CCTAGGCCAGAAATGACGT 59 NA DesignNoJunction Drosophila melanogaster 61 CG7488 FBgn0038106 FBtr0082695 1 1 1 137 3R 8822323 8822341 TCGAGTACTACAGTGTGGA 57 8822499 8822517 GGTCTGATGTAACTCGCTC 57 NA DesignNoJunction Drosophila melanogaster 61 CG7518 FBgn0038108 FBtr0301225,FBtr0301223,FBtr0301224 3 3 3 92 3R 8825163 8825181 ATGGCCATTGAGAACATGC 58 8825234 8825313 GAAATATAGCGTAATTGCACGC 59 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 1 5 5 81 3R 8845523 8845623 AAATACACGAGAAGGTCCTC 57 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 CtBP FBgn0020496 FBtr0082701,FBtr0082702,FBtr0082699,FBtr0082700,FBtr0100161 2 5 5 82 3R 8845522 8845623 GAAATACACGAGAAGGTCCTC 58 8845665 8845685 TTCTCAAGATCCTCCTTTGTC 57 NA Drosophila melanogaster 61 yrt FBgn0004049 FBtr0082793,FBtr0114376,FBtr0114375 3 3 4 80 3R 9257247 9257399 TCAGCTCAGTGTTAAGAGC 57 9257185 9257205 GATGGATCTTTGACAATGGAC 57 NA Drosophila melanogaster 61 lkb1 FBgn0038167 FBtr0082813,FBtr0082812,FBtr0082811,FBtr0301488,FBtr0082810,FBtr0082815,FBtr0082808,FBtr0082809,FBtr0082814 3 9 9 81 3R 9504342 9504363 ATACCTTACTTGGAAGCTTACC 57 9504405 9504480 CGAGCTCCTGATTTACGTC 58 NA Drosophila melanogaster 61 His4r FBgn0013981 FBtr0082962,FBtr0082963,FBtr0082964 1 3 3 111 3R 10451850 10451868 ATCCAGGGTATCACCAAGC 59 10451940 10452025 CAAGGAATACCTTTAGCACACC 59 NA Drosophila melanogaster 61 Spn5 FBgn0028984 FBtr0083142,FBtr0083141 3 2 2 91 3R 11029203 11029284 GGAACTTAATCCTATCCTTGCC 58 11029133 11029151 AAATCGTCTCGGAGGTCAG 59 NA Drosophila melanogaster 61 CG4210 FBgn0038302 FBtr0083049 1 1 2 117 3R 11039821 11039903 ATGATTCAAGAACTGGCTGAC 58 11040046 11040068 GCACATAGACTTCACAATACTCC 59 NA Drosophila melanogaster 61 mRpS10 FBgn0038307 FBtr0083053,FBtr0113237 3 2 4 89 3R 11055455 11055535 TGTTACAGGCTATAAAGACGC 58 11055586 11055604 AAAGATTGCCTTGTACGCC 58 NA Nonspecific Drosophila melanogaster 61 Cp190 FBgn0000283 FBtr0083127,FBtr0083126 1 2 2 158 3R 11098706 11098789 GAATACTACTGGGCCCTGG 59 11098566 11098584 TTGTTGACAGACCTCCACC 59 NA Drosophila melanogaster 61 CG31302 FBgn0051302 FBtr0301026,FBtr0301025,FBtr0301024,FBtr0301027 2 4 4 80 3R 11217401 11217419 CGATGAGTCCAAATCCCGA 59 11217458 11218031 CCTTATCACCAAATACCTTGATCG 59 NA Drosophila melanogaster 61 Atx2 FBgn0041188 FBtr0083099,FBtr0083100 3 2 3 97 3R 11240688 11240836 GTAATTACCCTCCAATGGCC 58 11240896 11240914 GATGAATTGCGGTATCGGG 58 NA Drosophila melanogaster 61 Mhcl FBgn0026059 FBtr0110973,FBtr0110974,FBtr0083229,FBtr0083231 1 4 6 96 3R 11914469 11914487 TATCGACAAGGCACCTCAG 59 11914331 11914409 TTCCTCATCCAGTAGCCAC 58 NA Drosophila melanogaster 61 Akt1 FBgn0010379 FBtr0083226,FBtr0083228,FBtr0083227 2 3 3 90 3R 11928090 11928112 TAGCTCCGGAAGTATTAGATGAC 59 11928162 11928243 CGACCACAGATCATCTCGT 59 NA Drosophila melanogaster 61 CG8927 FBgn0038405 FBtr0083254 2 1 2 82 3R 12011541 12011622 ATCACCAAGGGAACCTATGG 59 12011667 12011685 GGATCGCACTTGATTCCAG 58 NA Drosophila melanogaster 61 ss FBgn0003513 FBtr0083318,FBtr0300195 1 2 2 92 3R 12205517 12209719 GATATGTTCCTCCAGGCCC 59 12205443 12205463 CAAATAGCTCTCGATGCTGTG 59 NA Drosophila melanogaster 61 Ubx FBgn0003944 FBtr0083347 3 1 6 88 3R 12558425 12558443 AGTGTCCTGAAGATCCGAC 58 12536321 12550986 TGAGTATCTCTTACCCATGTCTG 59 NA Drosophila melanogaster 61 Keap1 FBgn0038475 FBtr0083423,FBtr0083424,FBtr0083422 1 3 3 88 3R 12901900 12901977 ATTTCACTCAGGTGTGCCA 59 12901830 12901850 CACATTCAGTTCATCCCTTCG 59 NA Drosophila melanogaster 61 beat-IIb FBgn0038494 FBtr0083411,FBtr0300610 1 2 2 185 3R 13065431 13065449 CCAAGGTCTTTCAGTTCCC 58 13064754 13065203 GCTTCTCCGGAAATTCCAC 58 NA Drosophila melanogaster 61 osa FBgn0003013 FBtr0301487,FBtr0089581,FBtr0089582,FBtr0089583 3 4 4 107 3R 13533849 13533868 TCTCAATATTCGCCGTACCC 59 13533697 13533779 ATTCGGTTCGGGATACTGG 59 NA Drosophila melanogaster 61 CG42457 FBgn0259934 FBtr0300243,FBtr0300244 2 2 2 60 3R 13837421 13837824 CATCTCTTTAGAGACCAACAGC 58 13837842 13837863 CTGATTGTTGCTTGATTGTTGC 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 PP2A-B FBgn0042693 FBtr0083553,FBtr0083552,FBtr0290320 3 3 7 83 3R 13995812 13997262 AGCAGTTTGGCTAACAAACTC 59 13997307 13997325 GATGTTCAGGACCTTGCTG 58 NA Drosophila melanogaster 61 fru FBgn0004652 FBtr0083640,FBtr0083646,FBtr0083651,FBtr0083641,FBtr0083647,FBtr0083649,FBtr0083644,FBtr0083643,FBtr0301284,FBtr0083652,FBtr0083645,FBtr0083648,FBtr0083650,FBtr0083642 2 14 14 83 3R 14260003 14260026 CTCATCATCCAACTGTGATAACTC 59 14258527 14259961 GACTTGAAGTTGGCCTGAG 58 NA Drosophila melanogaster 61 CG33541 FBgn0053541 FBtr0091507 2 1 1 176 3R 14322981 14323592 CAAGGATCAATGGCAGTGC 59 14322823 14322841 AATTCATAACGCAGCCGTC 59 NA DesignNoJunction Drosophila melanogaster 61 CG7694 FBgn0038627 FBtr0083632,FBtr0290211 1 2 2 80 3R 14416081 14416101 CAGAAGTACAGGATCCTTCCA 59 14416141 14416254 ACAGGAATTCGTCTTCTTCAG 58 NA Drosophila melanogaster 61 unc79 FBgn0038693 FBtr0301693 3 1 3 91 3R 15061293 15062559 GAACCCAGATGGTCATATCCA 59 15061222 15061241 CTGACTCCTCCAGTTCTGTG 59 NA Drosophila melanogaster 61 GluClalpha FBgn0024963 FBtr0100128,FBtr0083788,FBtr0301380,FBtr0100127 2 4 7 97 3R 15593278 15593297 TATATCGCGGATCACCTTCC 59 15593354 15600650 CTTAGAAGGTCTCATCCTCCTC 59 NA Drosophila melanogaster 61 ire-1 FBgn0038736 FBtr0113248,FBtr0113249 3 2 2 80 3R 15681145 15681167 TACTCTCCCACGAATACAATCTG 59 15681025 15681108 ATTGCTCAGCAAGGATAATTCG 59 NA Drosophila melanogaster 61 Stat92E FBgn0016917 FBtr0089486,FBtr0089485,FBtr0089487 3 3 5 80 3R 16367452 16367471 CTTACTACGAGGAGAAGGGT 58 16367265 16367412 TTTGTTCGGACATTATCCTGTC 58 NA Drosophila melanogaster 61 TFAM FBgn0038805 FBtr0083949,FBtr0083948 1 2 2 81 3R 16401331 16401875 CTCTACAGGAAAGCGATTTCC 58 16401270 16401288 TAAGATTTCCGTGACGCAC 58 NA Drosophila melanogaster 61 SNF4Agamma FBgn0025803 FBtr0301587,FBtr0110939,FBtr0084021,FBtr0301586,FBtr0110938,FBtr0084022 1 6 16 105 3R 17027958 17027978 CAAGAGCTTGGATGTGAACAC 59 17028043 17028184 CATGTGAGCACCTTCTTTGAC 59 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 1 2 2 82 3R 17096238 17096314 CGATCGTCTCACAAGATAACC 58 17096358 17096376 CGTTCCTGTTCGATTTCGT 58 NA Drosophila melanogaster 61 CG5919 FBgn0038876 FBtr0084055,FBtr0300616 3 2 2 93 3R 17096168 17096186 TGATGTTAAGCTCCATCGC 58 17096241 17096317 GAAGGTTATCTTGTGAGACGA 57 NA Drosophila melanogaster 61 CG33092 FBgn0053092 FBtr0084143,FBtr0084140,FBtr0084142,FBtr0084146,FBtr0084141,FBtr0084144 3 6 6 70 3R 17705051 17705071 CGAACCCATTAGAGACATCCA 59 17705103 17705178 CCACAAATCCCGAAAGTCC 58 NA DesignRelaxed Drosophila melanogaster 61 loco FBgn0020278 FBtr0084275,FBtr0084274,FBtr0084276,FBtr0084273 1 4 4 146 3R 18446764 18446782 AGAAGTCCACTAGCAGCAG 59 18446569 18446655 GTAGTTCATCTTGGTGCTCG 58 NA Drosophila melanogaster 61 wfs1 FBgn0039003 FBtr0084334 2 1 3 87 3R 18515857 18515875 CTTAAGCATCACATCGCCG 59 18515731 18515810 TGGGCTCTACTATGGAATTATCG 59 NA Drosophila melanogaster 61 CG6982 FBgn0039014 FBtr0113267,FBtr0113268 1 2 2 80 3R 18555589 18555675 GAACTAACCATGGCCAATCG 59 18555717 18555736 AAATAGAAAGATGGCCGCAC 59 NA Nonspecific Drosophila melanogaster 61 Ir FBgn0039061 FBtr0113273 2 1 3 134 3R 19004882 19008672 GAGGAGCTTCTCAGGTACC 58 19008770 19009171 GATGTCCTGCAGATAGCGA 59 NA Drosophila melanogaster 61 cnc FBgn0000338 FBtr0084392,FBtr0084393 2 2 7 82 3R 19017473 19017491 CATTAACCAGACGGATGGC 58 19014843 19017430 GACAGAAGCTCTCATTCATGTC 59 NA Drosophila melanogaster 61 Irk2 FBgn0039081 FBtr0084426,FBtr0084425 1 2 3 96 3R 19340164 19340182 AAACCACTCAGGTGGACAC 59 19340033 19340106 GTAAAGGTGGTTTCTGGTGTG 59 NA Drosophila melanogaster 61 CG10375 FBgn0039116 FBtr0084458,FBtr0300681 1 2 2 92 3R 19594038 19594185 GAACGGATCAAATGATTGCAG 58 19594239 19594257 TGTACTTGGTGGGATCGTC 59 NA Drosophila melanogaster 61 CG5854 FBgn0039130 FBtr0084495,FBtr0084494 3 2 2 108 3R 19760640 19760755 ATAAGCGCTATTTGATGCCG 59 19760825 19760844 ACGTGCACAGTATTCAAACG 59 NA Drosophila melanogaster 61 KrT95D FBgn0020647 FBtr0084508,FBtr0301419,FBtr0084507,FBtr0301418,FBtr0084506 2 5 5 101 3R 19824626 19824644 ATAAGGAGCGTGATCTCGA 58 19824482 19824561 CAATGTACACTCGCAGTGG 58 NA Drosophila melanogaster 61 Myo95E FBgn0039157 FBtr0084579,FBtr0100518,FBtr0100519,FBtr0100516 1 4 7 108 3R 19982893 19982993 GTTTATATCGTGTCGCCCG 58 19982803 19982821 TGTCTGATCTTCCACTGGC 59 NA Drosophila melanogaster 61 CG5746 FBgn0039186 FBtr0273282,FBtr0084631,FBtr0084630,FBtr0273283 3 4 4 111 3R 20172701 20172813 CAGAACTACAACTCGACGG 58 20172608 20172626 CGGTAGCATTGTAGTCCAC 58 NA Drosophila melanogaster 61 CG13623 FBgn0039205 FBtr0084679 1 1 1 245 3R 20355999 20356017 TTCCTACTGCGACAAGTGG 59 20355711 20355729 AAACTGTCGGTCATCCTCG 59 NA DesignNoJunction Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 1 6 6 104 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386452 20386470 GCTTAGCTTGTCCAGTTCC 58 NA Drosophila melanogaster 61 CG13624 FBgn0039209 FBtr0084672,FBtr0084675,FBtr0110796,FBtr0084674,FBtr0084673,FBtr0110795 2 6 6 123 3R 20386538 20386623 AAGGTGTACAAGCACAGTG 58 20386433 20386451 TCATGTCATTGATGGTGCG 58 NA Drosophila melanogaster 61 tok FBgn0004885 FBtr0084689,FBtr0084690 1 2 2 91 3R 20570005 20570515 TGTTGAAAGCGGAAACGTC 59 20570570 20570588 ATAGTCCCAGATGCGTTCC 59 NA Drosophila melanogaster 61 CG11892 FBgn0039313 FBtr0089645,FBtr0089644 3 2 2 137 3R 21108535 21108620 AAGAAATTCTACGCTGCCC 58 21108720 21108739 ATTCCTATAGCAGGCATCCT 58 NA Drosophila melanogaster 61 Fur1 FBgn0004509 FBtr0089982 1 1 6 95 3R 21174049 21177846 GTGCTTAGAGTGCAATGACTC 59 21173974 21173992 TCTGCTTGGAACTTGTCCA 59 NA Drosophila melanogaster 61 LpR1 FBgn0066101 FBtr0113480,FBtr0301466,FBtr0301468 1 3 7 80 3R 21577832 21577853 TTGGTGTTTACTCTTCGTTAGC 59 21575102 21577793 CAAGTGGCCTCATTTATAGCC 59 NA Drosophila melanogaster 61 CG42235 FBgn0250757 FBtr0290140 1 1 5 80 3R 21739962 21740037 AAGCATCAACTCAAAGAGCG 59 21740079 21740098 AATTGTGCAGATAGGCACAG 58 NA Drosophila melanogaster 61 CG31086 FBgn0051086 FBtr0084989 3 1 1 107 3R 22011370 22011388 AGCTCAATCGAAATGGACG 58 22011530 22011548 AATGAAGATGGTGTCGCCA 59 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 Rb97D FBgn0004903 FBtr0100335,FBtr0100336 1 2 9 82 3R 22699837 22699858 CCAAGCACAACAATATGAATGC 59 22699708 22699794 TAGCCCGTATATGCTACGG 58 NA Drosophila melanogaster 61 sda FBgn0015541 FBtr0112882,FBtr0085066 2 2 2 80 3R 22769909 22769997 GAGATTGTCGAATACTATGGCG 59 22770035 22770056 GTCCTTGTTCATGTAGATGGTC 58 NA Drosophila melanogaster 61 CG14253 FBgn0039467 FBtr0085073,FBtr0085072,FBtr0085070,FBtr0085071,FBtr0085074 3 5 5 80 3R 22809869 22809887 CACCCAGTATGCCTATGGA 58 22809930 22810007 TTAAAGATTTGGCTCTCGCT 57 NA Drosophila melanogaster 61 Nep5 FBgn0039478 FBtr0085148,FBtr0085147 3 2 3 189 3R 22886861 22887131 ATACAATCCAACAAGGAGTGC 58 22886692 22886710 GGACCACACGCATTATGTG 59 NA Drosophila melanogaster 61 woc FBgn0010328 FBtr0112857,FBtr0085178 2 2 2 81 3R 23083857 23083875 GTACTACGAGCGGTTTACC 57 23083730 23083813 GACAATGTATTGCGAATCGT 57 NA Drosophila melanogaster 61 WASp FBgn0024273 FBtr0085353,FBtr0085352 2 2 3 113 3R 24652891 24656236 CAAGAAGTGCCAGACACTC 58 24652796 24652815 CTATCCTTGACGAAGCACAC 58 NA Drosophila melanogaster 61 Doa FBgn0259220 FBtr0299743,FBtr0299751 3 2 13 82 3R 24736890 24745223 CTTCATCGAGACAGCAAAGC 59 24745267 24745286 TGTGATGGAGAATGTCTCCG 59 NA Drosophila melanogaster 61 CG11876 FBgn0039635 FBtr0085368,FBtr0085367 1 2 4 83 3R 24939870 24940162 TCGATCACGCAAAGATACTC 57 24940206 24940226 GTGGACTTTCAATTATGAGGC 57 NA Drosophila melanogaster 61 CG11882 FBgn0039642 FBtr0085411 1 1 1 187 3R 24973675 24973693 CGACGAAGACGTCTTTGTG 59 24973436 24973454 GTCCAATGAACAGCTCCAC 58 NA DesignNoJunction Drosophila melanogaster 61 Cnx99A FBgn0015622 FBtr0110909,FBtr0085438,FBtr0085437 1 3 4 113 3R 25142077 25142449 GTGAATCGGACTCATTCGT 57 25141982 25142000 TACAGTAGATGGTGAGGGC 58 NA Drosophila melanogaster 61 CG31036 FBgn0051036 FBtr0114571,FBtr0085501 3 2 2 80 3R 25736007 25736169 TACGTCAACCTCAAATTCAGC 59 25736211 25736229 TCGACCATTCACCAGAACC 59 NA Drosophila melanogaster 61 CG15523 FBgn0039727 FBtr0085505 1 1 2 80 3R 25771019 25771095 ATCAACCAAGAATTGCTCGG 59 25771135 25771156 GTATCACAGTTATGCTTAGCCT 58 NA Drosophila melanogaster 61 Fer2LCH FBgn0015221 FBtr0085622,FBtr0085624,FBtr0085623 1 3 3 76 3R 26214989 26215010 CAAGGATGATGAATATTGCCAG 57 26215047 26215433 TACAAATGGAGTTGGCCGA 59 NA DesignRelaxed Drosophila melanogaster 61 CDase FBgn0039774 FBtr0085649,FBtr0085647,FBtr0085646,FBtr0085648,FBtr0085645 1 5 5 81 3R 26289005 26289024 TCTGCTCTATGACATCTCCA 57 26289066 26289145 TTTGATGCACAGATACAGTCC 58 NA Drosophila melanogaster 61 CG2246 FBgn0039790 FBtr0085677,FBtr0302609,FBtr0302313,FBtr0085676,FBtr0302610,FBtr0302608,FBtr0085675,FBtr0302607 1 8 13 153 3R 26420666 26420684 TGATTGTAGCTCGCAATCC 58 26419563 26420549 GTAGAGTTTCTGGTCGGTG 57 NA Drosophila melanogaster 61 gammaCop FBgn0028968 FBtr0301290,FBtr0085794,FBtr0085793 3 3 3 80 3R 27398867 27398982 GTTTGCATGCTGATACGCA 59 27399026 27399044 CAAGGGTGAATCGGAAAGC 59 NA Drosophila melanogaster 61 faf FBgn0005632 FBtr0085844,FBtr0085843 2 2 2 80 3R 27608525 27608648 TTGAAGATGAAGAGGAACACTG 58 27608684 27608707 CACTAAGGTTGTATAGCACTTGAG 59 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 3 12 22 81 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707528 27707548 CTGATTGTTATTGTCGGAAGC 57 NA Drosophila melanogaster 61 heph FBgn0011224 FBtr0300264,FBtr0085886,FBtr0085883,FBtr0300270,FBtr0085888,FBtr0112866,FBtr0085887,FBtr0085882,FBtr0085885,FBtr0085879,FBtr0085884,FBtr0085878 1 12 22 80 3R 27707589 27784772 TAATATTGGAGTTAAGCGCGG 58 27707529 27707549 TGATTGTTATTGTCGGAAGCG 59 NA Drosophila melanogaster 61 CG2316 FBgn0039890 FBtr0089152,FBtr0089149,FBtr0089147,FBtr0089151,FBtr0089148,FBtr0089150,FBtr0089146 3 7 7 80 4 208668 208692 GTATTTAAGACATATACACTCCCGC 59 207456 208632 TGCATTTCCACCTTATGACCT 59 NA Drosophila melanogaster 61 CaMKI FBgn0016126 FBtr0089067,FBtr0089069,FBtr0089068,FBtr0089066,FBtr0089064,FBtr0089065 2 6 7 82 4 470583 470875 AAATGGAACGCGGTTAACTC 59 470916 470938 CCATAACGAGATACACCTTTGAC 59 NA Drosophila melanogaster 61 Pur-alpha FBgn0022361 FBtr0089993 3 1 4 189 4 580915 581004 TCTCAGGATCAAGGTTCCT 57 581350 581368 GACTTCGTCTACCATCAGC 57 NA Drosophila melanogaster 61 bt FBgn0005666 FBtr0089793 1 1 3 80 4 748857 751406 GCCTAAACTTCGACAGTGC 59 751447 751468 ATTCATTTGGGATGATTCTCGG 59 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 3 9 9 80 4 1068498 1068518 CCAGGATATCTGTCTCCTGAG 58 1068345 1068457 AAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 CaMKII FBgn0004624 FBtr0089218,FBtr0300379,FBtr0300378,FBtr0089217,FBtr0100148,FBtr0089219,FBtr0300377,FBtr0100146,FBtr0100147 2 9 9 80 4 1068496 1068516 AGGATATCTGTCTCCTGAGGT 59 1068343 1068457 TAAAGAATAACTCCACATGCCC 58 NA Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070128,FBtr0070124 3 2 8 85 X 550804 551137 CATAACCTGCAAGAGAAAGC 57 551185 551203 CGATCTGGATATCCGTGTC 57 NA InUTR Drosophila melanogaster 61 skpA FBgn0025637 FBtr0070123,FBtr0070126,FBtr0070125 3 3 8 61 X 550407 550425 GTCACTATAGCCGTTTCGT 57 551148 551167 AAGATTGCAACTTGATGCTG 57 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG11378 FBgn0040364 FBtr0070197 3 1 1 91 X 1065713 1065731 AACACGAACGTTAGCATCG 59 1065903 1065921 TCTTCGTAGAAGGTTGCGT 59 NA DesignNoJunction Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 br FBgn0000210 FBtr0070263,FBtr0070266,FBtr0070262,FBtr0300428,FBtr0300430,FBtr0070265,FBtr0070261,FBtr0300427,FBtr0300429 2 9 9 89 X 1529980 1529998 AGTCCTTCCTTAAGACCGC 59 1530051 1530144 GTATCTGAGCCAGATGGCT 59 NA Drosophila melanogaster 61 Scgdelta FBgn0025391 FBtr0070277,FBtr0302174,FBtr0302175 3 3 4 81 X 1643847 1643942 ATGGAGTTCTCAACGGAGG 59 1643784 1643804 CCATAATTATCGCTTGTCCGG 59 NA Drosophila melanogaster 61 arm FBgn0000117 FBtr0089988,FBtr0089992,FBtr0089989,FBtr0089991 3 4 5 90 X 1787491 1787509 ATATGAGGGCCTGTACGGA 59 1786136 1787442 TGGTAGAGTATCATATCCTTGCTG 59 NA Drosophila melanogaster 61 CG2854 FBgn0040391 FBtr0070399 3 1 1 105 X 2221588 2221606 CTGAGGTCATGTAAGCTGC 58 2221846 2221864 TCACCGGTTCCTTTCTCAG 59 NA DesignNoJunction Drosophila melanogaster 61 phl FBgn0003079 FBtr0070401,FBtr0112818 1 2 3 80 X 2235010 2235028 CCCGCGAGAATATTGATGC 59 2235066 2235219 CCTGGTATTCTATTAAGTACATGGC 59 NA Drosophila melanogaster 61 trol FBgn0261451 FBtr0301697,FBtr0091965,FBtr0070451 2 3 8 80 X 2385227 2385246 AGGAGATACGTTCAAATCGC 58 2384864 2385185 CAACGTCGTTATCTAGTCCG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 2 14 15 80 X 2565202 2565220 GTATACAAAGTGGCTCGCC 58 2565262 2565358 CAGTTGATACATGTAGAGCCG 58 NA Drosophila melanogaster 61 sgg FBgn0003371 FBtr0070466,FBtr0070474,FBtr0302185,FBtr0070467,FBtr0111035,FBtr0070475,FBtr0070476,FBtr0070471,FBtr0070472,FBtr0070468,FBtr0301966,FBtr0070469,FBtr0070473,FBtr0070470 1 14 15 80 X 2565201 2565219 CGTATACAAAGTGGCTCGC 59 2565261 2565357 AGTTGATACATGTAGAGCCGA 58 NA Drosophila melanogaster 61 CG2694 FBgn0024991 FBtr0070482,FBtr0070483,FBtr0070481 3 3 3 124 X 2609204 2609222 CTTCCTTCACTCGTCCGAG 59 2609309 2609385 CAATGGCACTAGGATTGCTG 59 NA Drosophila melanogaster 61 CG3588 FBgn0025643 FBtr0301058 1 1 4 83 X 2817394 2817719 TCGGATTCTTCGGACTTCG 59 2817766 2817784 ATGATGTTCCGTTCTGGGT 59 NA Drosophila melanogaster 61 dnc FBgn0000479 FBtr0070512,FBtr0070513,FBtr0070515,FBtr0070511 2 4 12 122 X 3175075 3175093 TTTGAGTCCAATTCACGCA 58 3175178 3215082 ACATCGAAACCAAAGAGGTC 58 NA Drosophila melanogaster 61 Proc-R FBgn0029723 FBtr0100551,FBtr0100552,FBtr0070714,FBtr0070713 3 4 4 92 X 4619144 4619163 TCCAGCACTATGACTATCCC 58 4619217 4620277 AGATGTAACCGAAACTGTCG 58 NA Drosophila melanogaster 61 CG42594 FBgn0260971 FBtr0301749,FBtr0301750 1 2 2 104 X 4793478 4797991 CACAATTGGCTATGGAAACGT 59 4798057 4798075 CTGCTCAGGTAGACCAAGG 59 NA Drosophila melanogaster 61 CG4165 FBgn0029763 FBtr0070774,FBtr0070772,FBtr0070773,FBtr0070775 1 4 4 80 X 5317038 5317158 AGAACACTACCAGACACCTC 58 5317200 5317219 CACTCATAGCACCAGATGTC 58 NA Drosophila melanogaster 61 Marf FBgn0029870 FBtr0070909,FBtr0070910 1 2 3 124 X 6263370 6263389 TGGAGTTTAAGTTCAGCTGG 57 6263476 6263563 TACGCTGTGTCCAATACTG 57 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 Pink1 FBgn0029891 FBtr0100419,FBtr0100415,FBtr0100413,FBtr0070957,FBtr0100414,FBtr0100420,FBtr0100416,FBtr0070956 1 8 8 90 X 6580600 6580618 TATTGCGGCAAATGTGGTG 59 6580672 6580754 CTGTAGGATCTCCGGACTG 58 NA Drosophila melanogaster 61 CG3168 FBgn0029896 FBtr0070986,FBtr0070985,FBtr0070984 3 3 3 269 X 6616721 6617426 CTCAATGGTGCAGCTTTGG 59 6616470 6616489 GGGCAGATAGAAGAGAAGGA 58 NA DesignRelaxed Drosophila melanogaster 61 pod1 FBgn0029903 FBtr0070965,FBtr0070968,FBtr0070967,FBtr0070964,FBtr0070966 1 5 6 105 X 6701674 6702857 CAATTATTCCACGTTTGGGTC 57 6702924 6702942 ATATTCTCGTGGGATCCCG 58 NA Drosophila melanogaster 61 CG42308 FBgn0259204 FBtr0299695,FBtr0299694 3 2 2 161 X 6905758 6905776 GATCAATTGGACAGTGGGC 58 6905962 6905980 GAATTTCAGGTACTGGCCC 58 NA Nonspecific, DesignNoJunction, InUTR Drosophila melanogaster 61 CG4607 FBgn0029932 FBtr0071014,FBtr0071013 2 2 2 60 X 6964931 6964950 AATCCCTCAGATACTTCCGC 59 6965440 6965459 TCGAATTCCGGTACGTAGTC 59 NA DesignNoJunction Drosophila melanogaster 61 sdt FBgn0243505 FBtr0111034,FBtr0100375 3 2 7 157 X 8117846 8117864 TCAGGGAGATTGACCAGGA 59 8118074 8121915 ATTCCCATTGAGCTGTGGT 59 NA Drosophila melanogaster 61 nej FBgn0015624 FBtr0302722,FBtr0071402,FBtr0302723 3 3 3 80 X 9566938 9566956 TGTTTACACCTGCAACCAC 58 9566814 9566897 ATACACAGATCGAAGTCATCAC 58 NA Drosophila melanogaster 61 CG1354 FBgn0030151 FBtr0089384,FBtr0089385,FBtr0089383 3 3 4 89 X 9673268 9674284 GAATGAGAGTCGTGTTCCG 58 9674545 9674564 TTCAAATAGGCAGGAACCAC 58 NA Drosophila melanogaster 61 flw FBgn0000711 FBtr0071446,FBtr0071447 3 2 2 87 X 10300656 10300678 CCTACAAGATCAAATATCCGGAG 58 10300724 10300804 TCGTAGAAGCCGTAAATCCT 58 NA Drosophila melanogaster 61 Gtp-bp FBgn0010391 FBtr0073480 2 1 1 81 X 11022925 11022943 GTAACAGTTTCGCCTCCTG 58 11022794 11022812 TCGTAGTACTTGGCCTCTG 58 NA DesignNoJunction Drosophila melanogaster 61 CG32666 FBgn0052666 FBtr0301020,FBtr0301021,FBtr0073507,FBtr0073508 1 4 4 160 X 11444819 11444837 GATCCTGGACAACGAGGAG 59 11444959 11445070 TCAATCCATCTTCTATGCGCT 59 NA Drosophila melanogaster 61 bif FBgn0014133 FBtr0073526 2 1 2 197 X 11583564 11587585 AATTTACCGTTGGGCTCCA 59 11587746 11587764 GTTGAACATCAACCGGCTG 59 NA Drosophila melanogaster 61 Hsc70-3 FBgn0001218 FBtr0073608,FBtr0073610,FBtr0073609,FBtr0073611 2 4 4 140 X 11698482 11698938 GTATTCCTGCGTTGGTGTG 59 11698360 11698378 GTCAACTGATTCTTGGCGG 59 NA Drosophila melanogaster 61 cac FBgn0005563 FBtr0073589,FBtr0073588 1 2 10 87 X 11856105 11856123 ACCCGTGGAACATATTCGA 58 11848307 11856054 GAGTTCGAATCATCGTGCC 59 NA Drosophila melanogaster 61 regucalcin FBgn0030362 FBtr0073576,FBtr0073578,FBtr0073577,FBtr0073575 1 4 4 97 X 11910743 11910818 GGTTAATCCCAACACTGGC 58 11910879 11910897 ACAGGATGTCCAAGTTGGG 59 NA Drosophila melanogaster 61 CG11138 FBgn0030400 FBtr0073662 2 1 3 169 X 12467838 12475613 TCAAAGCAGAGCACATGTC 58 12467372 12467390 TACTTCGGAGCTGGTAACG 59 NA Drosophila melanogaster 61 CkIalpha FBgn0015024 FBtr0073680,FBtr0073682,FBtr0073681,FBtr0300380 2 4 4 81 X 12550120 12550139 GAACTATTGTCGTAGCCTGC 58 12550183 12550382 CGTTCTGAACAGTATGCGG 59 NA Drosophila melanogaster 61 Tis11 FBgn0011837 FBtr0073683 3 1 2 95 X 12554818 12554837 TGTCTGCTGATATTCTGCAG 57 12554894 12571782 AGTGATCGTTCATCGTTACG 58 NA Drosophila melanogaster 61 Tango13 FBgn0086674 FBtr0113443 2 1 2 115 X 13479983 13480001 AATGGGTTGGCCAAATACC 58 13480079 13483965 TTGGCCTTTAACATAGTCCG 58 NA Drosophila melanogaster 61 CG32626 FBgn0052626 FBtr0073833 1 1 4 85 X 13727059 13728860 AAGGAGGTGTCGGAATCTG 59 13726992 13727010 TCATTGGGAAACTCGACGT 59 NA Drosophila melanogaster 61 yl FBgn0004649 FBtr0073898,FBtr0073897 3 2 2 142 X 14088451 14088545 GAGGATGCTTAAATCTATGTGAGC 59 14088646 14088664 CTTGGAGTGACAGAGGTCG 59 NA Drosophila melanogaster 61 CG14411 FBgn0030582 FBtr0300432,FBtr0073946 1 2 4 124 X 14726982 14727183 GTAATCCGAACGACAGCAG 58 14727268 14727289 CATTATTTAGTCGGTGGTACGT 58 NA InUTR Drosophila melanogaster 61 shi FBgn0003392 FBtr0301597,FBtr0301596 1 2 12 81 X 15793038 15793056 CTGGAAAGCATCCTTCCTG 58 15793101 15793488 CTCTTGTCCTTCCTCATCG 57 NA Drosophila melanogaster 61 CG8909 FBgn0030706 FBtr0301666,FBtr0074125 2 2 2 80 X 15810037 15810055 AAAGATGCGAACCTTGCTC 58 15810098 15810519 AACATAAAGCCCTCAATCGG 58 NA Drosophila melanogaster 61 CG42353 FBgn0259699 FBtr0299952,FBtr0299953 2 2 2 60 X 15991602 15991751 CTGTCGATGATCAATGTGCT 58 15991561 15991579 GCGACAGGTAAACTCTGGA 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 disco FBgn0000459 FBtr0100384,FBtr0074250 3 2 2 177 X 16110288 16110308 CAACTCGCTGCTAAATTAGCA 59 16107225 16107243 TAGATGGGAGTGCACATGC 59 NA DesignNoJunction, InUTR Drosophila melanogaster 61 CG32576 FBgn0052576 FBtr0100556,FBtr0074245 3 2 2 189 X 16182485 16182504 TGAATTGGTGTTTACGTGGA 57 16182161 16182270 GAATAGAATATTGCCAATGGCG 58 NA Nonspecific, InUTR Drosophila melanogaster 61 Cap FBgn0015615 FBtr0074290 2 1 2 107 X 16486765 16486984 GAGTTCCAATCGACAAAGAAGAG 59 16486680 16486698 GATTGACCACCTCATTGCG 59 NA Drosophila melanogaster 61 CG9059 FBgn0030810 FBtr0299584 1 1 3 108 X 16870572 16908969 CAAATGGAGGAACTGGTGG 58 16870482 16870503 AGATCGAGAATATGATCAGGCT 58 NA Drosophila melanogaster 61 f FBgn0000630 FBtr0300258,FBtr0074421,FBtr0074423,FBtr0074420,FBtr0074422 1 5 6 85 X 17173693 17173776 TGGACCAGATCTACTTGCA 58 17173825 17173843 CTTCTTGGCCATCATCTGG 58 NA Drosophila melanogaster 61 CG5445 FBgn0030838 FBtr0074428,FBtr0074425,FBtr0074427,FBtr0074426 3 4 4 80 X 17197413 17198115 ATGAGTAACTGGAGCCTGC 59 17198159 17198177 GATCTTCATCGAAGGCAGC 58 NA Nonspecific Drosophila melanogaster 61 CG32556 FBgn0052556 FBtr0074477 1 1 2 80 X 17583307 17583325 CAAAGACGACGAGGAAAGC 59 17578703 17583266 GTTATCCACTCCTCTTCTTTGG 58 NA Drosophila melanogaster 61 CG15373 FBgn0030889 FBtr0074508 2 1 2 148 X 17938962 17939207 GGGATATGGAATCTCTTAACCC 57 17939316 17939334 GTAGTTCAACCAGAGTCCC 57 NA Drosophila melanogaster 61 CG7206 FBgn0030892 FBtr0089575,FBtr0089576 3 2 2 176 X 17983254 17983335 AATACAAGCTCAATCCGCT 57 17983096 17983114 CAGGAGACCTGAATGTTGG 57 NA Drosophila melanogaster 61 wupA FBgn0004028 FBtr0074524,FBtr0074525,FBtr0074522 2 3 7 93 X 18003568 18003586 TGCGAAGAGTATTACGAGC 57 18000955 18003511 GATCGTTGATCTCCCAGTC 57 NA Drosophila melanogaster 61 ari-1 FBgn0017418 FBtr0089507,FBtr0089506,FBtr0089508 1 3 3 80 X 18027216 18027295 ATGTCATGGATTGAGGTGC 57 18027154 18027174 GTACGTGTACATGAGAGTCTG 58 NA Drosophila melanogaster 61 CG6023 FBgn0030912 FBtr0074579,FBtr0074580 1 2 2 108 X 18208963 18209061 ACCAAAGAATGGCTGAGGA 59 18208873 18208891 CTTCCTTGACCTCCGACTG 59 NA Drosophila melanogaster 61 CrebB-17A FBgn0014467 FBtr0074555,FBtr0074556,FBtr0112879,FBtr0112878,FBtr0074554,FBtr0112877,FBtr0074557 2 7 9 72 X 18267444 18267465 CGTACAATAAGATCTTCACCGA 58 18269885 18269903 GTCTGATCCTCCGCTATCC 59 NA DesignNoJunction Drosophila melanogaster 61 CG32549 FBgn0052549 FBtr0074571 3 1 6 103 X 18298093 18298111 AAACCGACATGGATCAGTC 57 18286934 18298026 CACAAACACTCTGTGACCA 57 NA Drosophila melanogaster 61 GalNAc-T2 FBgn0030930 FBtr0074624,FBtr0074625 1 2 2 80 X 18392027 18392047 AAGGTCATCAGGAACAAGGAG 59 18391525 18391985 GATCACCTCACCTGTAGCC 59 NA Drosophila melanogaster 61 gfA FBgn0086778 FBtr0301834,FBtr0301835,FBtr0074680 1 3 4 80 X 19234581 19234602 CTTACAGTCTTCCTCAACATGG 58 19228544 19234543 ATTGAAATAAGTTCCGAGCAGC 59 NA Drosophila melanogaster 61 jog FBgn0031079 FBtr0074805,FBtr0074804 1 2 2 126 X 19729773 19729791 CTGGTTGATGAGCGAATGG 59 19729588 19729683 CAAAGAGGCGTTCCATCTG 58 NA Drosophila melanogaster 61 sw FBgn0003654 FBtr0089405 3 1 13 216 X 20106418 20106436 CAACTCGATGACTTCGGAC 58 20101678 20105853 ATCAAATGCAAGCACATCG 57 NA DesignRelaxed Drosophila melanogaster 61 sw FBgn0003654 FBtr0089400,FBtr0089403,FBtr0089409,FBtr0089408 1 4 13 133 X 20105880 20105899 TCTACACAAAGCAGACCCAG 59 20101657 20103195 CTCTTCGTCGTCTCCTGTG 59 NA Nonspecific Drosophila melanogaster 61 hydra FBgn0031128 FBtr0077294,FBtr0077295 3 2 3 160 X 20543396 20543921 AAAGACATCGCAAGTCCGA 59 20543254 20543274 GATTGGTTGGAATCCTCTGGA 59 NA Drosophila melanogaster 61 CG15449 FBgn0031146 FBtr0077266 2 1 1 64 X 20911412 20911431 TGGTCAAGTTTCTCGAACTG 58 20911142 20911162 GTTGAAGCTGTAGAAGTGGAG 58 NA DesignNoJunction Drosophila melanogaster 61 CG1486 FBgn0031174 FBtr0077191,FBtr0077190 2 2 2 80 X 21195590 21195746 GCTTCCAGTATTCGATCGG 58 21195788 21195808 CACCTTAACGTTCTCTAAGCG 59 NA Drosophila melanogaster 61 sol FBgn0003464 FBtr0089677,FBtr0301583,FBtr0089679,FBtr0089678,FBtr0089676 1 5 5 80 X 21228145 21228163 AGGAGAGCTACAATGTGGT 58 21228206 21228294 TGATTACTTGTCTCTGCAGC 58 NA Drosophila melanogaster 61 slgA FBgn0003423 FBtr0077209,FBtr0077205,FBtr0077208,FBtr0077203,FBtr0077210 2 5 8 83 X 21247628 21247646 CTAATACGCGCCTATCTCG 57 21247690 21250632 CTTTGACCATTTCATAAGCGTC 58 NA Drosophila melanogaster 61 CG42343 FBgn0259245 FBtr0299898,FBtr0299901 2 2 4 132 X 21296199 21296519 CCTATATGAAATGGAGCGTCC 58 21295942 21295960 ATAGAGTCTGCCGTTCAGG 58 NA Drosophila melanogaster 61 Cp110 FBgn0031191 FBtr0100651,FBtr0077352 2 2 5 148 X 21886225 21886243 GAGGTGAAGAAATCGCCAG 58 21886353 21887248 TCGACATATTTATTGCCCAGC 58 NA Drosophila melanogaster 61 l(1)G0196 FBgn0027279 FBtr0299525 2 1 5 100 X 21900445 21904038 CAAAGAACCGGCAACAGAG 59 21904101 21904120 TAACTGTTGGTGTAAGCAGC 58 NA Drosophila melanogaster 61 CG2893 FBgn0040030 FBtr0301132,FBtr0113768,FBtr0113769,FBtr0301133 2 4 4 89 XHet 12050 12365 GGATGATAACGATAATCGGAGAC 58 12414 12432 CTTCAGGGACACTGGTACC 59 NA Drosophila melanogaster 61 CG17169 FBgn0040514 FBtr0302055 3 1 1 117 XHet 63708 63726 GAGAACACTTACGTGGTGG 58 64140 64158 TAAGATTAAAGGCTGGCGC 58 NA DesignNoJunction Drosophila melanogaster 61 CG17162 FBgn0039944 FBtr0113724,FBtr0113726,FBtr0300041,FBtr0113723,FBtr0113725 2 5 5 60 XHet 66315 67541 CTATAGCTGCACGATTGCC 58 66273 66291 CTGTCCTCTACATCCACCG 59 NA Nonspecific, DesignRelaxed Drosophila melanogaster 61 tRNA:CR31895 FBgn0051895 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-A1061 FBgn0082952 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mir-7 FBgn0046816 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me28S-A774a FBgn0086079 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 snoRNA:Me18S-U1356a FBgn0082949 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:R:83AB FBgn0011965 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 tRNA:CR32520 FBgn0052520 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers Drosophila melanogaster 61 mt:tRNA:V FBgn0013708 - 0 0 0 0 - 0 0 - 0 0 0 - 0 NA No primers